#transId geneId source chrom start end strand proteinId geneName transcriptName geneType transcriptType MGP_LPJ_T0012189.1 MGP_LPJ_G0010280.1 mouse_genomes_project 1 115535698 115542581 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099954.1 MGP_LPJ_G0038217.1 mouse_genomes_project 1 8437387 8437478 + Gm22963 snoRNA snoRNA MGP_LPJ_T0011904.1 MGP_LPJ_G0009995.1 mouse_genomes_project 1 10610617 10610938 + processed_pseudogene processed_pseudogene MGP_LPJ_T0023116.1 MGP_LPJ_G0016614.1 mouse_genomes_project 1 172201433 172271273 - MGP_LPJ_P0023116 Rcsd1 protein_coding protein_coding MGP_LPJ_T0023117.1 MGP_LPJ_G0016614.1 mouse_genomes_project 1 172203864 172271235 - MGP_LPJ_P0023117 Rcsd1 protein_coding protein_coding MGP_LPJ_T0023118.1 MGP_LPJ_G0016614.1 mouse_genomes_project 1 172221599 172272580 - MGP_LPJ_P0023118 Rcsd1 protein_coding protein_coding MGP_LPJ_T0023119.1 MGP_LPJ_G0016614.1 mouse_genomes_project 1 172267708 172272913 - Rcsd1 protein_coding retained_intron MGP_LPJ_T0023120.1 MGP_LPJ_G0016614.1 mouse_genomes_project 1 172271625 172272944 - Rcsd1 protein_coding processed_transcript MGP_LPJ_T0012318.1 MGP_LPJ_G0010409.1 mouse_genomes_project 1 172519453 172521362 + processed_pseudogene processed_pseudogene MGP_LPJ_T0019859.1 MGP_LPJ_G0015961.1 mouse_genomes_project 1 58840649 58842532 + Aox3 protein_coding retained_intron MGP_LPJ_T0019860.1 MGP_LPJ_G0015961.1 mouse_genomes_project 1 58840655 58931931 + MGP_LPJ_P0019860 Aox3 protein_coding protein_coding MGP_LPJ_T0019861.1 MGP_LPJ_G0015961.1 mouse_genomes_project 1 58840657 58849913 + Aox3 protein_coding retained_intron MGP_LPJ_T0019862.1 MGP_LPJ_G0015961.1 mouse_genomes_project 1 58840705 58865261 + MGP_LPJ_P0019862 Aox3 protein_coding protein_coding MGP_LPJ_T0019863.1 MGP_LPJ_G0015961.1 mouse_genomes_project 1 58899895 58902520 + Aox3 protein_coding retained_intron MGP_LPJ_T0005858.1 MGP_LPJ_G0004914.1 mouse_genomes_project 1 94120072 94121223 - 1700020N18Rik lincRNA lincRNA MGP_LPJ_T0000388.1 MGP_LPJ_G0000326.1 mouse_genomes_project 1 681901 683958 - TEC TEC MGP_LPJ_T0012268.1 MGP_LPJ_G0010359.1 mouse_genomes_project 1 150559232 150560225 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000636.1 MGP_LPJ_G0000571.1 mouse_genomes_project 1 127760543 127762036 - TEC TEC MGP_LPJ_T0022420.1 MGP_LPJ_G0016482.1 mouse_genomes_project 1 149121235 149148610 - MGP_LPJ_P0022420 Trove2 protein_coding protein_coding MGP_LPJ_T0022421.1 MGP_LPJ_G0016482.1 mouse_genomes_project 1 149126295 149148464 - Trove2 protein_coding retained_intron MGP_LPJ_T0020956.1 MGP_LPJ_G0016161.1 mouse_genomes_project 1 88659587 88661463 + B3gnt7 protein_coding retained_intron MGP_LPJ_T0020957.1 MGP_LPJ_G0016161.1 mouse_genomes_project 1 88659989 88664060 + MGP_LPJ_P0020957 B3gnt7 protein_coding protein_coding MGP_LPJ_T0020958.1 MGP_LPJ_G0016161.1 mouse_genomes_project 1 88660286 88662604 + MGP_LPJ_P0020958 B3gnt7 protein_coding protein_coding MGP_LPJ_T0019844.1 MGP_LPJ_G0015958.1 mouse_genomes_project 1 58679773 58696049 - MGP_LPJ_P0019844 Kctd18 protein_coding protein_coding MGP_LPJ_T0019845.1 MGP_LPJ_G0015958.1 mouse_genomes_project 1 58679920 58696093 - MGP_LPJ_P0019845 Kctd18 protein_coding protein_coding MGP_LPJ_T0019846.1 MGP_LPJ_G0015958.1 mouse_genomes_project 1 58679925 58695489 - MGP_LPJ_P0019846 Kctd18 protein_coding nonsense_mediated_decay MGP_LPJ_T0019847.1 MGP_LPJ_G0015958.1 mouse_genomes_project 1 58680744 58747623 - MGP_LPJ_P0019847 Kctd18 protein_coding nonsense_mediated_decay MGP_LPJ_T0019848.1 MGP_LPJ_G0015958.1 mouse_genomes_project 1 58681252 58696013 - MGP_LPJ_P0019848 Kctd18 protein_coding protein_coding MGP_LPJ_T0019849.1 MGP_LPJ_G0015958.1 mouse_genomes_project 1 58681364 58688098 - Kctd18 protein_coding retained_intron MGP_LPJ_T0019850.1 MGP_LPJ_G0015958.1 mouse_genomes_project 1 58681392 58686753 - Kctd18 protein_coding retained_intron MGP_LPJ_T0019851.1 MGP_LPJ_G0015958.1 mouse_genomes_project 1 58684704 58696017 - Kctd18 protein_coding retained_intron MGP_LPJ_T0019852.1 MGP_LPJ_G0015958.1 mouse_genomes_project 1 58685808 58687632 - Kctd18 protein_coding retained_intron MGP_LPJ_T0019853.1 MGP_LPJ_G0015958.1 mouse_genomes_project 1 58689530 58696044 - Kctd18 protein_coding retained_intron MGP_LPJ_T0019854.1 MGP_LPJ_G0015958.1 mouse_genomes_project 1 58689566 58696044 - Kctd18 protein_coding retained_intron MGP_LPJ_T0002927.1 MGP_LPJ_G0002756.1 mouse_genomes_project 1 143655052 143690974 + Gm28501 antisense antisense MGP_LPJ_T0023576.1 MGP_LPJ_G0016724.1 mouse_genomes_project 1 180619400 180629007 - MGP_LPJ_P0023576 Pydc3 protein_coding protein_coding MGP_LPJ_T0023578.1 MGP_LPJ_G0016724.1 mouse_genomes_project 1 180622883 180629012 - Pydc3 protein_coding retained_intron MGP_LPJ_T0023054.1 MGP_LPJ_G0016601.1 mouse_genomes_project 1 170806420 170824795 - MGP_LPJ_P0023054 Blzf1 protein_coding protein_coding MGP_LPJ_T0023055.1 MGP_LPJ_G0016601.1 mouse_genomes_project 1 170808009 170824800 - MGP_LPJ_P0023055 Blzf1 protein_coding protein_coding MGP_LPJ_T0023056.1 MGP_LPJ_G0016601.1 mouse_genomes_project 1 170808750 170824800 - MGP_LPJ_P0023056 Blzf1 protein_coding protein_coding MGP_LPJ_T0023057.1 MGP_LPJ_G0016601.1 mouse_genomes_project 1 170816852 170824583 - Blzf1 protein_coding processed_transcript MGP_LPJ_T0023059.1 MGP_LPJ_G0016601.1 mouse_genomes_project 1 170822512 170824782 - Blzf1 protein_coding retained_intron MGP_LPJ_T0018830.1 MGP_LPJ_G0015752.1 mouse_genomes_project 1 8501051 8820481 + MGP_LPJ_P0018830 Prex2 protein_coding protein_coding MGP_LPJ_T0018831.1 MGP_LPJ_G0015752.1 mouse_genomes_project 1 8501104 8504192 + Prex2 protein_coding retained_intron MGP_LPJ_T0018832.1 MGP_LPJ_G0015752.1 mouse_genomes_project 1 8604868 8663195 + Prex2 protein_coding retained_intron MGP_LPJ_T0018833.1 MGP_LPJ_G0015752.1 mouse_genomes_project 1 8653939 8673673 + Prex2 protein_coding retained_intron MGP_LPJ_T0018836.1 MGP_LPJ_G0015752.1 mouse_genomes_project 1 8776161 8811461 + MGP_LPJ_P0018836 Prex2 protein_coding nonsense_mediated_decay MGP_LPJ_T0018837.1 MGP_LPJ_G0015752.1 mouse_genomes_project 1 8794476 8811660 + MGP_LPJ_P0018837 Prex2 protein_coding nonsense_mediated_decay MGP_LPJ_T0097963.1 MGP_LPJ_G0036244.1 mouse_genomes_project 1 123615884 123617684 + pseudogene pseudogene MGP_LPJ_T0012200.1 MGP_LPJ_G0010291.1 mouse_genomes_project 1 119069853 119070427 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002879.1 MGP_LPJ_G0002721.1 mouse_genomes_project 1 95608282 95625222 - Gm29481 antisense antisense MGP_LPJ_T0002847.1 MGP_LPJ_G0002697.1 mouse_genomes_project 1 65151388 65163498 + Gm13748 antisense antisense MGP_LPJ_T0101723.1 MGP_LPJ_G0039761.1 mouse_genomes_project 1 176591440 176591644 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002953.1 MGP_LPJ_G0002778.1 mouse_genomes_project 1 168426024 168437533 + 2810442N19Rik antisense antisense MGP_LPJ_T0002954.1 MGP_LPJ_G0002778.1 mouse_genomes_project 1 168426227 168437542 + 2810442N19Rik antisense antisense MGP_LPJ_T0000744.1 MGP_LPJ_G0000677.1 mouse_genomes_project 1 166625728 166626874 - TEC TEC MGP_LPJ_T0000728.1 MGP_LPJ_G0000661.1 mouse_genomes_project 1 162522934 162525528 + TEC TEC MGP_LPJ_T0021693.1 MGP_LPJ_G0016326.1 mouse_genomes_project 1 124634607 124667731 - MGP_LPJ_P0021693 Marco protein_coding protein_coding MGP_LPJ_T0021694.1 MGP_LPJ_G0016326.1 mouse_genomes_project 1 124653625 124667463 - MGP_LPJ_P0021694 Marco protein_coding protein_coding MGP_LPJ_T0006085.1 MGP_LPJ_G0005094.1 mouse_genomes_project 1 203313003 203319288 - Gm32250 lincRNA lincRNA MGP_LPJ_T0002937.1 MGP_LPJ_G0002763.1 mouse_genomes_project 1 157696466 157707413 + Gm28610 antisense antisense MGP_LPJ_T0000514.1 MGP_LPJ_G0000449.1 mouse_genomes_project 1 59618555 59622396 + TEC TEC MGP_LPJ_T0012332.1 MGP_LPJ_G0010423.1 mouse_genomes_project 1 178586229 178586757 - processed_pseudogene processed_pseudogene MGP_LPJ_T0021890.1 MGP_LPJ_G0016370.1 mouse_genomes_project 1 135913495 135936875 - MGP_LPJ_P0021890 Rassf5 protein_coding protein_coding MGP_LPJ_T0021891.1 MGP_LPJ_G0016370.1 mouse_genomes_project 1 135915610 135986200 - MGP_LPJ_P0021891 Rassf5 protein_coding protein_coding MGP_LPJ_T0021892.1 MGP_LPJ_G0016370.1 mouse_genomes_project 1 135944388 135986333 - Rassf5 protein_coding processed_transcript MGP_LPJ_T0000634.1 MGP_LPJ_G0000569.1 mouse_genomes_project 1 127680610 127682618 - TEC TEC MGP_LPJ_T0005794.1 MGP_LPJ_G0004864.1 mouse_genomes_project 1 70910437 70913869 - Gm29113 lincRNA lincRNA MGP_LPJ_T0023856.1 MGP_LPJ_G0016799.1 mouse_genomes_project 1 188898519 188917804 + MGP_LPJ_P0023856 Cnih4 protein_coding protein_coding MGP_LPJ_T0023857.1 MGP_LPJ_G0016799.1 mouse_genomes_project 1 188898581 188917804 + MGP_LPJ_P0023857 Cnih4 protein_coding protein_coding MGP_LPJ_T0023858.1 MGP_LPJ_G0016799.1 mouse_genomes_project 1 188902326 188915191 + Cnih4 protein_coding processed_transcript MGP_LPJ_T0023859.1 MGP_LPJ_G0016799.1 mouse_genomes_project 1 188903308 188915159 + Cnih4 protein_coding retained_intron MGP_LPJ_T0000666.1 MGP_LPJ_G0000601.1 mouse_genomes_project 1 137765457 137767266 - TEC TEC MGP_LPJ_T0098812.1 MGP_LPJ_G0037075.1 mouse_genomes_project 1 196812933 196813037 + Gm25269 snRNA snRNA MGP_LPJ_T0005993.1 MGP_LPJ_G0005022.1 mouse_genomes_project 1 171184840 171219510 - lincRNA lincRNA MGP_LPJ_T0098452.1 MGP_LPJ_G0036732.1 mouse_genomes_project 1 94547242 94548713 + Gm29101 sense_intronic sense_intronic MGP_LPJ_T0024095.1 MGP_LPJ_G0016848.1 mouse_genomes_project 1 198872194 199097526 - MGP_LPJ_P0024095 Rps6kc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024096.1 MGP_LPJ_G0016848.1 mouse_genomes_project 1 198945811 199097549 - MGP_LPJ_P0024096 Rps6kc1 protein_coding protein_coding MGP_LPJ_T0024097.1 MGP_LPJ_G0016848.1 mouse_genomes_project 1 198945811 199097517 - MGP_LPJ_P0024097 Rps6kc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024098.1 MGP_LPJ_G0016848.1 mouse_genomes_project 1 198945811 199014005 - MGP_LPJ_P0024098 Rps6kc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024099.1 MGP_LPJ_G0016848.1 mouse_genomes_project 1 198970158 199025456 - Rps6kc1 protein_coding retained_intron MGP_LPJ_T0024100.1 MGP_LPJ_G0016848.1 mouse_genomes_project 1 198972537 199097513 - Rps6kc1 protein_coding retained_intron MGP_LPJ_T0024101.1 MGP_LPJ_G0016848.1 mouse_genomes_project 1 198988861 198990437 - Rps6kc1 protein_coding retained_intron MGP_LPJ_T0024102.1 MGP_LPJ_G0016848.1 mouse_genomes_project 1 199053777 199084404 - Rps6kc1 protein_coding processed_transcript MGP_LPJ_T0024103.1 MGP_LPJ_G0016848.1 mouse_genomes_project 1 199067225 199097548 - MGP_LPJ_P0024103 Rps6kc1 protein_coding protein_coding MGP_LPJ_T0000511.1 MGP_LPJ_G0000446.1 mouse_genomes_project 1 56138153 56139749 + TEC TEC MGP_LPJ_T0000560.1 MGP_LPJ_G0000495.1 mouse_genomes_project 1 81557704 81559268 - TEC TEC MGP_LPJ_T0098751.1 MGP_LPJ_G0037014.1 mouse_genomes_project 1 68062278 68062338 + Gm27934 snRNA snRNA MGP_LPJ_T0011929.1 MGP_LPJ_G0010020.1 mouse_genomes_project 1 19464457 19465581 - processed_pseudogene processed_pseudogene MGP_LPJ_T0019813.1 MGP_LPJ_G0015952.1 mouse_genomes_project 1 57297155 57298547 - MGP_LPJ_P0019813 Hsfy2 protein_coding protein_coding MGP_LPJ_T0101231.1 MGP_LPJ_G0039485.1 mouse_genomes_project 1 163557775 163568498 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101232.1 MGP_LPJ_G0039485.1 mouse_genomes_project 1 163568166 163568417 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0005772.1 MGP_LPJ_G0004846.1 mouse_genomes_project 1 62271191 62277030 + Gm11587 lincRNA lincRNA MGP_LPJ_T0002909.1 MGP_LPJ_G0002742.1 mouse_genomes_project 1 136912233 136915530 + Gm29629 antisense antisense MGP_LPJ_T0021474.1 MGP_LPJ_G0016279.1 mouse_genomes_project 1 100834145 100857920 + MGP_LPJ_P0021474 Gin1 protein_coding protein_coding MGP_LPJ_T0021475.1 MGP_LPJ_G0016279.1 mouse_genomes_project 1 100834152 100843703 + MGP_LPJ_P0021475 Gin1 protein_coding protein_coding MGP_LPJ_T0021476.1 MGP_LPJ_G0016279.1 mouse_genomes_project 1 100834170 100858660 + MGP_LPJ_P0021476 Gin1 protein_coding protein_coding MGP_LPJ_T0021477.1 MGP_LPJ_G0016279.1 mouse_genomes_project 1 100834174 100834978 + Gin1 protein_coding processed_transcript MGP_LPJ_T0021478.1 MGP_LPJ_G0016279.1 mouse_genomes_project 1 100834183 100857957 + MGP_LPJ_P0021478 Gin1 protein_coding nonsense_mediated_decay MGP_LPJ_T0021479.1 MGP_LPJ_G0016279.1 mouse_genomes_project 1 100839070 100841596 + Gin1 protein_coding retained_intron MGP_LPJ_T0021480.1 MGP_LPJ_G0016279.1 mouse_genomes_project 1 100842950 100847526 + MGP_LPJ_P0021480 Gin1 protein_coding nonsense_mediated_decay MGP_LPJ_T0005687.1 MGP_LPJ_G0004786.1 mouse_genomes_project 1 21276885 21277236 + Gm29107 lincRNA lincRNA MGP_LPJ_T0021913.1 MGP_LPJ_G0016374.1 mouse_genomes_project 1 136345536 136358093 + MGP_LPJ_P0021913 Avpr1b protein_coding protein_coding MGP_LPJ_T0021914.1 MGP_LPJ_G0016374.1 mouse_genomes_project 1 136346020 136355847 + MGP_LPJ_P0021914 Avpr1b protein_coding protein_coding MGP_LPJ_T0101634.1 MGP_LPJ_G0039699.1 mouse_genomes_project 1 64962903 64989594 + unitary_pseudogene unitary_pseudogene MGP_LPJ_T0099982.1 MGP_LPJ_G0038245.1 mouse_genomes_project 1 60566444 60566531 + Snord70 snoRNA snoRNA MGP_LPJ_T0012192.1 MGP_LPJ_G0010283.1 mouse_genomes_project 1 115781062 115785156 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023604.1 MGP_LPJ_G0016746.1 mouse_genomes_project 1 181601025 181601955 + MGP_LPJ_P0023604 Olfr417 protein_coding protein_coding MGP_LPJ_T0019068.1 MGP_LPJ_G0015807.1 mouse_genomes_project 1 24851860 24860743 - MGP_LPJ_P0019068 4931408C20Rik protein_coding protein_coding MGP_LPJ_T0005924.1 MGP_LPJ_G0004967.1 mouse_genomes_project 1 137058667 137064798 - Gm29630 lincRNA lincRNA MGP_LPJ_T0000592.1 MGP_LPJ_G0000527.1 mouse_genomes_project 1 90288409 90289232 + TEC TEC MGP_LPJ_T0005984.1 MGP_LPJ_G0005014.1 mouse_genomes_project 1 167169161 167169625 + Gm38060 lincRNA lincRNA MGP_LPJ_T0000605.1 MGP_LPJ_G0000540.1 mouse_genomes_project 1 98277652 98280190 + TEC TEC MGP_LPJ_T0021790.1 MGP_LPJ_G0016345.1 mouse_genomes_project 1 132679545 132762833 + R3hdm1 protein_coding retained_intron MGP_LPJ_T0021791.1 MGP_LPJ_G0016345.1 mouse_genomes_project 1 132679565 132758826 + MGP_LPJ_P0021791 R3hdm1 protein_coding protein_coding MGP_LPJ_T0021792.1 MGP_LPJ_G0016345.1 mouse_genomes_project 1 132679568 132818553 + MGP_LPJ_P0021792 R3hdm1 protein_coding protein_coding MGP_LPJ_T0021793.1 MGP_LPJ_G0016345.1 mouse_genomes_project 1 132679568 132768533 + MGP_LPJ_P0021793 R3hdm1 protein_coding protein_coding MGP_LPJ_T0021794.1 MGP_LPJ_G0016345.1 mouse_genomes_project 1 132679575 132689488 + R3hdm1 protein_coding retained_intron MGP_LPJ_T0021795.1 MGP_LPJ_G0016345.1 mouse_genomes_project 1 132719748 132766574 + MGP_LPJ_P0021795 R3hdm1 protein_coding protein_coding MGP_LPJ_T0021796.1 MGP_LPJ_G0016345.1 mouse_genomes_project 1 132719771 132731113 + MGP_LPJ_P0021796 R3hdm1 protein_coding protein_coding MGP_LPJ_T0021797.1 MGP_LPJ_G0016345.1 mouse_genomes_project 1 132729600 132758879 + MGP_LPJ_P0021797 R3hdm1 protein_coding protein_coding MGP_LPJ_T0021798.1 MGP_LPJ_G0016345.1 mouse_genomes_project 1 132750632 132757839 + R3hdm1 protein_coding retained_intron MGP_LPJ_T0021799.1 MGP_LPJ_G0016345.1 mouse_genomes_project 1 132753667 132758814 + R3hdm1 protein_coding retained_intron MGP_LPJ_T0021800.1 MGP_LPJ_G0016345.1 mouse_genomes_project 1 132756532 132768333 + R3hdm1 protein_coding retained_intron MGP_LPJ_T0021801.1 MGP_LPJ_G0016345.1 mouse_genomes_project 1 132758839 132773054 + MGP_LPJ_P0021801 R3hdm1 protein_coding protein_coding MGP_LPJ_T0021802.1 MGP_LPJ_G0016345.1 mouse_genomes_project 1 132761441 132790701 + MGP_LPJ_P0021802 R3hdm1 protein_coding protein_coding MGP_LPJ_T0021803.1 MGP_LPJ_G0016345.1 mouse_genomes_project 1 132772384 132776094 + R3hdm1 protein_coding retained_intron MGP_LPJ_T0021804.1 MGP_LPJ_G0016345.1 mouse_genomes_project 1 132786510 132818552 + R3hdm1 protein_coding retained_intron MGP_LPJ_T0021805.1 MGP_LPJ_G0016345.1 mouse_genomes_project 1 132816074 132818553 + R3hdm1 protein_coding retained_intron MGP_LPJ_T0000717.1 MGP_LPJ_G0000650.1 mouse_genomes_project 1 158155151 158155510 - TEC TEC MGP_LPJ_T0012370.1 MGP_LPJ_G0010461.1 mouse_genomes_project 1 200254148 200254380 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098447.1 MGP_LPJ_G0036728.1 mouse_genomes_project 1 71087340 71089149 - Gm28112 sense_intronic sense_intronic MGP_LPJ_T0009539.1 MGP_LPJ_G0007657.1 mouse_genomes_project 1 104058658 104058767 + Gm25537 miRNA miRNA MGP_LPJ_T0000512.1 MGP_LPJ_G0000447.1 mouse_genomes_project 1 56557795 56558148 - TEC TEC MGP_LPJ_T0011920.1 MGP_LPJ_G0010011.1 mouse_genomes_project 1 16862461 16862740 + processed_pseudogene processed_pseudogene MGP_LPJ_T0020887.1 MGP_LPJ_G0016145.1 mouse_genomes_project 1 86937037 87009599 + MGP_LPJ_P0020887 Fbxo36 protein_coding protein_coding MGP_LPJ_T0020888.1 MGP_LPJ_G0016145.1 mouse_genomes_project 1 86937049 87009599 + Fbxo36 protein_coding processed_transcript MGP_LPJ_T0020889.1 MGP_LPJ_G0016145.1 mouse_genomes_project 1 86972483 87009599 + Fbxo36 protein_coding processed_transcript MGP_LPJ_T0020890.1 MGP_LPJ_G0016145.1 mouse_genomes_project 1 86975215 87009599 + Fbxo36 protein_coding processed_transcript MGP_LPJ_T0005887.1 MGP_LPJ_G0004939.1 mouse_genomes_project 1 111452459 111489312 + D830032E09Rik lincRNA lincRNA MGP_LPJ_T0005888.1 MGP_LPJ_G0004939.1 mouse_genomes_project 1 111452485 111489325 + D830032E09Rik lincRNA lincRNA MGP_LPJ_T0005889.1 MGP_LPJ_G0004939.1 mouse_genomes_project 1 111473256 111568227 + D830032E09Rik lincRNA lincRNA MGP_LPJ_T0005826.1 MGP_LPJ_G0004886.1 mouse_genomes_project 1 80702132 80703527 + Gm29187 lincRNA lincRNA MGP_LPJ_T0018947.1 MGP_LPJ_G0015774.1 mouse_genomes_project 1 14409135 14413028 + Ly96 protein_coding retained_intron MGP_LPJ_T0018948.1 MGP_LPJ_G0015774.1 mouse_genomes_project 1 14409517 14432628 + MGP_LPJ_P0018948 Ly96 protein_coding protein_coding MGP_LPJ_T0018949.1 MGP_LPJ_G0015774.1 mouse_genomes_project 1 14409592 14432552 + MGP_LPJ_P0018949 Ly96 protein_coding protein_coding MGP_LPJ_T0000827.1 MGP_LPJ_G0000758.1 mouse_genomes_project 1 199457558 199459404 + TEC TEC MGP_LPJ_T0021000.1 MGP_LPJ_G0016174.1 mouse_genomes_project 1 89584038 89589131 + MGP_LPJ_P0021000 Prss56 protein_coding protein_coding MGP_LPJ_T0101742.1 MGP_LPJ_G0039780.1 mouse_genomes_project 1 188810356 188819398 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0012338.1 MGP_LPJ_G0010429.1 mouse_genomes_project 1 184175981 184176310 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003024.1 MGP_LPJ_G0002832.1 mouse_genomes_project 1 201453384 201458490 + Gm15872 antisense antisense MGP_LPJ_T0098079.1 MGP_LPJ_G0036360.1 mouse_genomes_project 1 25166559 25166678 - n-R5s209 rRNA rRNA MGP_LPJ_T0002809.1 MGP_LPJ_G0002668.1 mouse_genomes_project 1 37250331 37260504 + Gm16150 antisense antisense MGP_LPJ_T0002810.1 MGP_LPJ_G0002668.1 mouse_genomes_project 1 37254600 37261567 + Gm16150 antisense antisense MGP_LPJ_T0011883.1 MGP_LPJ_G0009974.1 mouse_genomes_project 1 4766407 4768992 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000522.1 MGP_LPJ_G0000457.1 mouse_genomes_project 1 61733859 61735953 + TEC TEC MGP_LPJ_T0018983.1 MGP_LPJ_G0015787.1 mouse_genomes_project 1 18653755 18671248 - MGP_LPJ_P0018983 Mcm3 protein_coding protein_coding MGP_LPJ_T0018984.1 MGP_LPJ_G0015787.1 mouse_genomes_project 1 18653760 18671196 - Mcm3 protein_coding retained_intron MGP_LPJ_T0018985.1 MGP_LPJ_G0015787.1 mouse_genomes_project 1 18653793 18654508 - Mcm3 protein_coding retained_intron MGP_LPJ_T0018986.1 MGP_LPJ_G0015787.1 mouse_genomes_project 1 18653952 18655704 - Mcm3 protein_coding retained_intron MGP_LPJ_T0018987.1 MGP_LPJ_G0015787.1 mouse_genomes_project 1 18655467 18656711 - Mcm3 protein_coding retained_intron MGP_LPJ_T0012035.1 MGP_LPJ_G0010126.1 mouse_genomes_project 1 52748884 52749295 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101702.1 MGP_LPJ_G0039740.1 mouse_genomes_project 1 95368364 95368410 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0019727.1 MGP_LPJ_G0015933.1 mouse_genomes_project 1 53280102 53292623 + MGP_LPJ_P0019727 Osgepl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0019728.1 MGP_LPJ_G0015933.1 mouse_genomes_project 1 53280105 53283081 + Osgepl1 protein_coding processed_transcript MGP_LPJ_T0019729.1 MGP_LPJ_G0015933.1 mouse_genomes_project 1 53280105 53285107 + Osgepl1 protein_coding retained_intron MGP_LPJ_T0019730.1 MGP_LPJ_G0015933.1 mouse_genomes_project 1 53280111 53290513 + MGP_LPJ_P0019730 Osgepl1 protein_coding protein_coding MGP_LPJ_T0019731.1 MGP_LPJ_G0015933.1 mouse_genomes_project 1 53280121 53292616 + MGP_LPJ_P0019731 Osgepl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0023177.1 MGP_LPJ_G0016626.1 mouse_genomes_project 1 173260054 173280570 - MGP_LPJ_P0023177 Fmo9 protein_coding protein_coding MGP_LPJ_T0023178.1 MGP_LPJ_G0016626.1 mouse_genomes_project 1 173261287 173276412 - MGP_LPJ_P0023178 Fmo9 protein_coding protein_coding MGP_LPJ_T0011806.1 MGP_LPJ_G0009922.1 mouse_genomes_project 1 181306609 181307659 + MGP_LPJ_P0011806 Olfr421-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_LPJ_T0005976.1 MGP_LPJ_G0005009.1 mouse_genomes_project 1 165192283 165205043 - 1600012P17Rik lincRNA lincRNA MGP_LPJ_T0005977.1 MGP_LPJ_G0005009.1 mouse_genomes_project 1 165194190 165204651 - 1600012P17Rik lincRNA lincRNA MGP_LPJ_T0002863.1 MGP_LPJ_G0002706.1 mouse_genomes_project 1 76963297 76966345 + Gm28902 antisense antisense MGP_LPJ_T0000510.1 MGP_LPJ_G0000445.1 mouse_genomes_project 1 55588004 55589798 - TEC TEC MGP_LPJ_T0021118.1 MGP_LPJ_G0016196.1 mouse_genomes_project 1 90688054 90689105 - MGP_LPJ_P0021118 Dnajb3 protein_coding protein_coding MGP_LPJ_T0002994.1 MGP_LPJ_G0002810.1 mouse_genomes_project 1 193116125 193120280 - Gm34882 antisense antisense MGP_LPJ_T0023990.1 MGP_LPJ_G0016828.1 mouse_genomes_project 1 192754512 192860506 - MGP_LPJ_P0023990 Mark1 protein_coding protein_coding MGP_LPJ_T0023991.1 MGP_LPJ_G0016828.1 mouse_genomes_project 1 192777784 192860411 - MGP_LPJ_P0023991 Mark1 protein_coding protein_coding MGP_LPJ_T0002846.1 MGP_LPJ_G0002696.1 mouse_genomes_project 1 63721656 63724995 - Gm29083 antisense antisense MGP_LPJ_T0011919.1 MGP_LPJ_G0010010.1 mouse_genomes_project 1 16839579 16839691 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012367.1 MGP_LPJ_G0010458.1 mouse_genomes_project 1 199627510 199628092 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021505.1 MGP_LPJ_G0016285.1 mouse_genomes_project 1 108902080 109042180 - MGP_LPJ_P0021505 Pign protein_coding protein_coding MGP_LPJ_T0021506.1 MGP_LPJ_G0016285.1 mouse_genomes_project 1 108902084 109047584 - MGP_LPJ_P0021506 Pign protein_coding protein_coding MGP_LPJ_T0021507.1 MGP_LPJ_G0016285.1 mouse_genomes_project 1 108904804 108949990 - Pign protein_coding processed_transcript MGP_LPJ_T0021508.1 MGP_LPJ_G0016285.1 mouse_genomes_project 1 108936369 109047565 - MGP_LPJ_P0021508 Pign protein_coding protein_coding MGP_LPJ_T0021509.1 MGP_LPJ_G0016285.1 mouse_genomes_project 1 108940545 109047584 - MGP_LPJ_P0021509 Pign protein_coding protein_coding MGP_LPJ_T0021510.1 MGP_LPJ_G0016285.1 mouse_genomes_project 1 109029760 109047599 - Pign protein_coding retained_intron MGP_LPJ_T0021511.1 MGP_LPJ_G0016285.1 mouse_genomes_project 1 109029760 109047598 - Pign protein_coding retained_intron MGP_LPJ_T0021512.1 MGP_LPJ_G0016285.1 mouse_genomes_project 1 109029914 109032821 - Pign protein_coding retained_intron MGP_LPJ_T0021513.1 MGP_LPJ_G0016285.1 mouse_genomes_project 1 109041430 109047595 - Pign protein_coding retained_intron MGP_LPJ_T0021514.1 MGP_LPJ_G0016285.1 mouse_genomes_project 1 109042349 109047594 - Pign protein_coding retained_intron MGP_LPJ_T0021915.1 MGP_LPJ_G0016375.1 mouse_genomes_project 1 136388207 136419961 + MGP_LPJ_P0021915 Ctse protein_coding protein_coding MGP_LPJ_T0021916.1 MGP_LPJ_G0016375.1 mouse_genomes_project 1 136388395 136419959 + MGP_LPJ_P0021916 Ctse protein_coding protein_coding MGP_LPJ_T0021917.1 MGP_LPJ_G0016375.1 mouse_genomes_project 1 136406373 136409909 + Ctse protein_coding retained_intron MGP_LPJ_T0009499.1 MGP_LPJ_G0007617.1 mouse_genomes_project 1 35583970 35584045 + Gm24133 miRNA miRNA MGP_LPJ_T0000751.1 MGP_LPJ_G0000684.1 mouse_genomes_project 1 167088932 167093735 + TEC TEC MGP_LPJ_T0000714.1 MGP_LPJ_G0000647.1 mouse_genomes_project 1 156795889 156797977 + TEC TEC MGP_LPJ_T0021821.1 MGP_LPJ_G0016351.1 mouse_genomes_project 1 133927629 134088316 + Thsd7b protein_coding retained_intron MGP_LPJ_T0021822.1 MGP_LPJ_G0016351.1 mouse_genomes_project 1 133927671 134902986 + MGP_LPJ_P0021822 Thsd7b protein_coding protein_coding MGP_LPJ_T0021823.1 MGP_LPJ_G0016351.1 mouse_genomes_project 1 133927790 134730462 + MGP_LPJ_P0021823 Thsd7b protein_coding protein_coding MGP_LPJ_T0021824.1 MGP_LPJ_G0016351.1 mouse_genomes_project 1 133927812 134302545 + Thsd7b protein_coding processed_transcript MGP_LPJ_T0021825.1 MGP_LPJ_G0016351.1 mouse_genomes_project 1 134197914 134302579 + MGP_LPJ_P0021825 Thsd7b protein_coding protein_coding MGP_LPJ_T0021826.1 MGP_LPJ_G0016351.1 mouse_genomes_project 1 134284524 134287293 + Thsd7b protein_coding retained_intron MGP_LPJ_T0021827.1 MGP_LPJ_G0016351.1 mouse_genomes_project 1 134598251 134865058 + Thsd7b protein_coding processed_transcript MGP_LPJ_T0021828.1 MGP_LPJ_G0016351.1 mouse_genomes_project 1 134846654 134902984 + Thsd7b protein_coding processed_transcript MGP_LPJ_T0021829.1 MGP_LPJ_G0016351.1 mouse_genomes_project 1 134846669 134848222 + Thsd7b protein_coding processed_transcript MGP_LPJ_T0022154.1 MGP_LPJ_G0016427.1 mouse_genomes_project 1 139397914 139408856 + Klhl12 protein_coding retained_intron MGP_LPJ_T0022155.1 MGP_LPJ_G0016427.1 mouse_genomes_project 1 139397914 139434120 + MGP_LPJ_P0022155 Klhl12 protein_coding protein_coding MGP_LPJ_T0022156.1 MGP_LPJ_G0016427.1 mouse_genomes_project 1 139397914 139434265 + MGP_LPJ_P0022156 Klhl12 protein_coding protein_coding MGP_LPJ_T0022157.1 MGP_LPJ_G0016427.1 mouse_genomes_project 1 139397938 139434120 + MGP_LPJ_P0022157 Klhl12 protein_coding protein_coding MGP_LPJ_T0022158.1 MGP_LPJ_G0016427.1 mouse_genomes_project 1 139410895 139415898 + Klhl12 protein_coding retained_intron MGP_LPJ_T0022159.1 MGP_LPJ_G0016427.1 mouse_genomes_project 1 139417305 139429156 + Klhl12 protein_coding retained_intron MGP_LPJ_T0023912.1 MGP_LPJ_G0016810.1 mouse_genomes_project 1 190231001 190286524 + MGP_LPJ_P0023912 Trp53bp2 protein_coding protein_coding MGP_LPJ_T0023913.1 MGP_LPJ_G0016810.1 mouse_genomes_project 1 190265016 190285874 + Trp53bp2 protein_coding retained_intron MGP_LPJ_T0023914.1 MGP_LPJ_G0016810.1 mouse_genomes_project 1 190267686 190271751 + MGP_LPJ_P0023914 Trp53bp2 protein_coding protein_coding MGP_LPJ_T0005786.1 MGP_LPJ_G0004856.1 mouse_genomes_project 1 65097793 65103377 + Gm26649 lincRNA lincRNA MGP_LPJ_T0011963.1 MGP_LPJ_G0010054.1 mouse_genomes_project 1 32160667 32161085 + processed_pseudogene processed_pseudogene MGP_LPJ_T0019376.1 MGP_LPJ_G0015862.1 mouse_genomes_project 1 37005298 37064355 + MGP_LPJ_P0019376 Eif5b protein_coding protein_coding MGP_LPJ_T0019377.1 MGP_LPJ_G0015862.1 mouse_genomes_project 1 37005417 37060797 + Eif5b protein_coding retained_intron MGP_LPJ_T0019378.1 MGP_LPJ_G0015862.1 mouse_genomes_project 1 37048918 37052748 + Eif5b protein_coding retained_intron MGP_LPJ_T0019379.1 MGP_LPJ_G0015862.1 mouse_genomes_project 1 37049993 37053984 + Eif5b protein_coding processed_transcript MGP_LPJ_T0019380.1 MGP_LPJ_G0015862.1 mouse_genomes_project 1 37051930 37056111 + Eif5b protein_coding retained_intron MGP_LPJ_T0002922.1 MGP_LPJ_G0002751.1 mouse_genomes_project 1 140240194 140258411 + Gm26642 antisense antisense MGP_LPJ_T0022535.1 MGP_LPJ_G0016502.1 mouse_genomes_project 1 157578261 157641630 + MGP_LPJ_P0022535 Edem3 protein_coding protein_coding MGP_LPJ_T0022536.1 MGP_LPJ_G0016502.1 mouse_genomes_project 1 157578264 157644744 + MGP_LPJ_P0022536 Edem3 protein_coding protein_coding MGP_LPJ_T0022537.1 MGP_LPJ_G0016502.1 mouse_genomes_project 1 157578350 157641674 + MGP_LPJ_P0022537 Edem3 protein_coding protein_coding MGP_LPJ_T0022538.1 MGP_LPJ_G0016502.1 mouse_genomes_project 1 157578350 157641674 + MGP_LPJ_P0022538 Edem3 protein_coding protein_coding MGP_LPJ_T0009583.1 MGP_LPJ_G0007701.1 mouse_genomes_project 1 203360543 203360631 + Mir29c miRNA miRNA MGP_LPJ_T0021571.1 MGP_LPJ_G0016302.1 mouse_genomes_project 1 111063068 111075473 + MGP_LPJ_P0021571 protein_coding protein_coding MGP_LPJ_T0000506.1 MGP_LPJ_G0000441.1 mouse_genomes_project 1 54652844 54655445 - TEC TEC MGP_LPJ_T0021873.1 MGP_LPJ_G0016365.1 mouse_genomes_project 1 135651837 135659218 - MGP_LPJ_P0021873 Il19 protein_coding protein_coding MGP_LPJ_T0021874.1 MGP_LPJ_G0016365.1 mouse_genomes_project 1 135651839 135658372 - MGP_LPJ_P0021874 Il19 protein_coding protein_coding MGP_LPJ_T0021875.1 MGP_LPJ_G0016365.1 mouse_genomes_project 1 135651997 135659232 - MGP_LPJ_P0021875 Il19 protein_coding protein_coding MGP_LPJ_T0021876.1 MGP_LPJ_G0016365.1 mouse_genomes_project 1 135652039 135659190 - MGP_LPJ_P0021876 Il19 protein_coding protein_coding MGP_LPJ_T0019052.1 MGP_LPJ_G0015805.1 mouse_genomes_project 1 22738934 22771873 + MGP_LPJ_P0019052 Lmbrd1 protein_coding protein_coding MGP_LPJ_T0019053.1 MGP_LPJ_G0015805.1 mouse_genomes_project 1 22739013 22796172 + MGP_LPJ_P0019053 Lmbrd1 protein_coding protein_coding MGP_LPJ_T0019054.1 MGP_LPJ_G0015805.1 mouse_genomes_project 1 22739031 22831487 + MGP_LPJ_P0019054 Lmbrd1 protein_coding protein_coding MGP_LPJ_T0019055.1 MGP_LPJ_G0015805.1 mouse_genomes_project 1 22792910 22809419 + Lmbrd1 protein_coding retained_intron MGP_LPJ_T0019056.1 MGP_LPJ_G0015805.1 mouse_genomes_project 1 22809343 22827510 + MGP_LPJ_P0019056 Lmbrd1 protein_coding protein_coding MGP_LPJ_T0016945.1 MGP_LPJ_G0015016.1 mouse_genomes_project 1 76582078 76612307 + Gm16582 processed_transcript processed_transcript MGP_LPJ_T0023608.1 MGP_LPJ_G0016749.1 mouse_genomes_project 1 181665261 181672592 + MGP_LPJ_P0023608 Olfr220 protein_coding protein_coding MGP_LPJ_T0023609.1 MGP_LPJ_G0016749.1 mouse_genomes_project 1 181671614 181672592 + MGP_LPJ_P0023609 Olfr220 protein_coding protein_coding MGP_LPJ_T0012198.1 MGP_LPJ_G0010289.1 mouse_genomes_project 1 117362646 117363182 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000734.1 MGP_LPJ_G0000667.1 mouse_genomes_project 1 163504383 163505560 - TEC TEC MGP_LPJ_T0000551.1 MGP_LPJ_G0000486.1 mouse_genomes_project 1 74830004 74832530 - TEC TEC MGP_LPJ_T0011274.1 MGP_LPJ_G0009392.1 mouse_genomes_project 1 179642521 179642848 - Gm22383 misc_RNA misc_RNA MGP_LPJ_T0009558.1 MGP_LPJ_G0007676.1 mouse_genomes_project 1 165592600 165592666 + Mir1843b miRNA miRNA MGP_LPJ_T0020755.1 MGP_LPJ_G0016120.1 mouse_genomes_project 1 81545422 81613528 - MGP_LPJ_P0020755 Ap1s3 protein_coding protein_coding MGP_LPJ_T0020756.1 MGP_LPJ_G0016120.1 mouse_genomes_project 1 81547061 81613521 - MGP_LPJ_P0020756 Ap1s3 protein_coding nonsense_mediated_decay MGP_LPJ_T0020757.1 MGP_LPJ_G0016120.1 mouse_genomes_project 1 81547402 81613524 - MGP_LPJ_P0020757 Ap1s3 protein_coding nonsense_mediated_decay MGP_LPJ_T0005914.1 MGP_LPJ_G0004958.1 mouse_genomes_project 1 126428651 126480262 + Gm28590 lincRNA lincRNA MGP_LPJ_T0000565.1 MGP_LPJ_G0000500.1 mouse_genomes_project 1 82284392 82286210 - TEC TEC MGP_LPJ_T0021355.1 MGP_LPJ_G0016253.1 mouse_genomes_project 1 96029921 96097945 + MGP_LPJ_P0021355 Sned1 protein_coding protein_coding MGP_LPJ_T0021356.1 MGP_LPJ_G0016253.1 mouse_genomes_project 1 96029931 96080760 + Sned1 protein_coding retained_intron MGP_LPJ_T0021357.1 MGP_LPJ_G0016253.1 mouse_genomes_project 1 96030009 96093149 + MGP_LPJ_P0021357 Sned1 protein_coding unknown_likely_coding MGP_LPJ_T0021358.1 MGP_LPJ_G0016253.1 mouse_genomes_project 1 96070674 96078569 + Sned1 protein_coding processed_transcript MGP_LPJ_T0021359.1 MGP_LPJ_G0016253.1 mouse_genomes_project 1 96077488 96092658 + MGP_LPJ_P0021359 Sned1 protein_coding protein_coding MGP_LPJ_T0021360.1 MGP_LPJ_G0016253.1 mouse_genomes_project 1 96083095 96093347 + Sned1 protein_coding retained_intron MGP_LPJ_T0021361.1 MGP_LPJ_G0016253.1 mouse_genomes_project 1 96092565 96093469 + Sned1 protein_coding retained_intron MGP_LPJ_T0012343.1 MGP_LPJ_G0010434.1 mouse_genomes_project 1 186349103 186349691 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000574.1 MGP_LPJ_G0000509.1 mouse_genomes_project 1 85406862 85408151 - TEC TEC MGP_LPJ_T0000694.1 MGP_LPJ_G0000627.1 mouse_genomes_project 1 144102694 144105072 - TEC TEC MGP_LPJ_T0012288.1 MGP_LPJ_G0010379.1 mouse_genomes_project 1 158271147 158271606 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011940.1 MGP_LPJ_G0010031.1 mouse_genomes_project 1 23713122 23713692 - processed_pseudogene processed_pseudogene MGP_LPJ_T0020728.1 MGP_LPJ_G0016113.1 mouse_genomes_project 1 80276743 80350820 - MGP_LPJ_P0020728 Farsb protein_coding protein_coding MGP_LPJ_T0020729.1 MGP_LPJ_G0016113.1 mouse_genomes_project 1 80283841 80350858 - MGP_LPJ_P0020729 Farsb protein_coding protein_coding MGP_LPJ_T0020730.1 MGP_LPJ_G0016113.1 mouse_genomes_project 1 80283858 80350823 - MGP_LPJ_P0020730 Farsb protein_coding nonsense_mediated_decay MGP_LPJ_T0020731.1 MGP_LPJ_G0016113.1 mouse_genomes_project 1 80323330 80350820 - MGP_LPJ_P0020731 Farsb protein_coding protein_coding MGP_LPJ_T0020732.1 MGP_LPJ_G0016113.1 mouse_genomes_project 1 80331527 80350756 - Farsb protein_coding processed_transcript MGP_LPJ_T0020733.1 MGP_LPJ_G0016113.1 mouse_genomes_project 1 80334205 80350803 - MGP_LPJ_P0020733 Farsb protein_coding protein_coding MGP_LPJ_T0020734.1 MGP_LPJ_G0016113.1 mouse_genomes_project 1 80339492 80350798 - Farsb protein_coding retained_intron MGP_LPJ_T0002903.1 MGP_LPJ_G0002738.1 mouse_genomes_project 1 135451806 135452972 - Gm28857 antisense antisense MGP_LPJ_T0011992.1 MGP_LPJ_G0010083.1 mouse_genomes_project 1 43133739 43135018 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012059.1 MGP_LPJ_G0010150.1 mouse_genomes_project 1 61654086 61655152 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005704.1 MGP_LPJ_G0004801.1 mouse_genomes_project 1 34852461 34856875 - Gm37146 lincRNA lincRNA MGP_LPJ_T0000503.1 MGP_LPJ_G0000438.1 mouse_genomes_project 1 51497139 51499504 - TEC TEC MGP_LPJ_T0021422.1 MGP_LPJ_G0016264.1 mouse_genomes_project 1 96574262 96602930 + MGP_LPJ_P0021422 Atg4b protein_coding protein_coding MGP_LPJ_T0021423.1 MGP_LPJ_G0016264.1 mouse_genomes_project 1 96579526 96616057 + MGP_LPJ_P0021423 Atg4b protein_coding protein_coding MGP_LPJ_T0021424.1 MGP_LPJ_G0016264.1 mouse_genomes_project 1 96579609 96605535 + MGP_LPJ_P0021424 Atg4b protein_coding protein_coding MGP_LPJ_T0021425.1 MGP_LPJ_G0016264.1 mouse_genomes_project 1 96579656 96610365 + MGP_LPJ_P0021425 Atg4b protein_coding nonsense_mediated_decay MGP_LPJ_T0021426.1 MGP_LPJ_G0016264.1 mouse_genomes_project 1 96579666 96613621 + Atg4b protein_coding retained_intron MGP_LPJ_T0021427.1 MGP_LPJ_G0016264.1 mouse_genomes_project 1 96579783 96592478 + Atg4b protein_coding processed_transcript MGP_LPJ_T0021428.1 MGP_LPJ_G0016264.1 mouse_genomes_project 1 96592454 96602695 + Atg4b protein_coding retained_intron MGP_LPJ_T0021429.1 MGP_LPJ_G0016264.1 mouse_genomes_project 1 96609784 96610524 + Atg4b protein_coding retained_intron MGP_LPJ_T0021430.1 MGP_LPJ_G0016264.1 mouse_genomes_project 1 96610238 96613319 + MGP_LPJ_P0021430 Atg4b protein_coding nonsense_mediated_decay MGP_LPJ_T0021431.1 MGP_LPJ_G0016264.1 mouse_genomes_project 1 96611025 96612023 + Atg4b protein_coding retained_intron MGP_LPJ_T0021432.1 MGP_LPJ_G0016264.1 mouse_genomes_project 1 96611660 96613341 + Atg4b protein_coding retained_intron MGP_LPJ_T0000677.1 MGP_LPJ_G0000611.1 mouse_genomes_project 1 140915197 140917893 - TEC TEC MGP_LPJ_T0100047.1 MGP_LPJ_G0038310.1 mouse_genomes_project 1 193115315 193115447 + Snora36b snoRNA snoRNA MGP_LPJ_T0006030.1 MGP_LPJ_G0005053.1 mouse_genomes_project 1 189436862 189459343 + lincRNA lincRNA MGP_LPJ_T0006031.1 MGP_LPJ_G0005053.1 mouse_genomes_project 1 189436888 189449538 + lincRNA lincRNA MGP_LPJ_T0023513.1 MGP_LPJ_G0016703.1 mouse_genomes_project 1 179328905 179336401 + MGP_LPJ_P0023513 Pigm protein_coding protein_coding MGP_LPJ_T0000530.1 MGP_LPJ_G0000465.1 mouse_genomes_project 1 63247709 63250227 + TEC TEC MGP_LPJ_T0098095.1 MGP_LPJ_G0036376.1 mouse_genomes_project 1 155455023 155455155 + n-R5s219 rRNA rRNA MGP_LPJ_T0005850.1 MGP_LPJ_G0004906.1 mouse_genomes_project 1 91944848 91994382 - C030007H22Rik lincRNA lincRNA MGP_LPJ_T0023581.1 MGP_LPJ_G0016728.1 mouse_genomes_project 1 180672412 180689604 + MGP_LPJ_P0023581 Pyhin1 protein_coding protein_coding MGP_LPJ_T0020916.1 MGP_LPJ_G0016153.1 mouse_genomes_project 1 88263431 88266703 + MGP_LPJ_P0020916 4933407L21Rik protein_coding protein_coding MGP_LPJ_T0020917.1 MGP_LPJ_G0016153.1 mouse_genomes_project 1 88263675 88275560 + MGP_LPJ_P0020917 4933407L21Rik protein_coding protein_coding MGP_LPJ_T0020918.1 MGP_LPJ_G0016153.1 mouse_genomes_project 1 88263834 88266703 + 4933407L21Rik protein_coding retained_intron MGP_LPJ_T0012047.1 MGP_LPJ_G0010138.1 mouse_genomes_project 1 58004336 58005313 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005905.1 MGP_LPJ_G0004952.1 mouse_genomes_project 1 124991629 125012499 + Gm29345 lincRNA lincRNA MGP_LPJ_T0020828.1 MGP_LPJ_G0016135.1 mouse_genomes_project 1 84793864 84806283 - MGP_LPJ_P0020828 Tm4sf20 protein_coding protein_coding MGP_LPJ_T0020829.1 MGP_LPJ_G0016135.1 mouse_genomes_project 1 84794617 84806283 - Tm4sf20 protein_coding processed_transcript MGP_LPJ_T0005917.1 MGP_LPJ_G0004961.1 mouse_genomes_project 1 129873513 129876343 + Gm28706 lincRNA lincRNA MGP_LPJ_T0022361.1 MGP_LPJ_G0016469.1 mouse_genomes_project 1 144105603 144213069 + MGP_LPJ_P0022361 Dennd1b protein_coding protein_coding MGP_LPJ_T0022362.1 MGP_LPJ_G0016469.1 mouse_genomes_project 1 144105877 144324188 + MGP_LPJ_P0022362 Dennd1b protein_coding protein_coding MGP_LPJ_T0022363.1 MGP_LPJ_G0016469.1 mouse_genomes_project 1 144105896 144235092 + MGP_LPJ_P0022363 Dennd1b protein_coding nonsense_mediated_decay MGP_LPJ_T0022364.1 MGP_LPJ_G0016469.1 mouse_genomes_project 1 144106037 144327093 + MGP_LPJ_P0022364 Dennd1b protein_coding nonsense_mediated_decay MGP_LPJ_T0022365.1 MGP_LPJ_G0016469.1 mouse_genomes_project 1 144109880 144324188 + MGP_LPJ_P0022365 Dennd1b protein_coding protein_coding MGP_LPJ_T0022366.1 MGP_LPJ_G0016469.1 mouse_genomes_project 1 144203671 144206467 + Dennd1b protein_coding retained_intron MGP_LPJ_T0022367.1 MGP_LPJ_G0016469.1 mouse_genomes_project 1 144235087 144281537 + Dennd1b protein_coding retained_intron MGP_LPJ_T0022368.1 MGP_LPJ_G0016469.1 mouse_genomes_project 1 144271300 144324128 + Dennd1b protein_coding processed_transcript MGP_LPJ_T0022369.1 MGP_LPJ_G0016469.1 mouse_genomes_project 1 144278892 144322239 + Dennd1b protein_coding processed_transcript MGP_LPJ_T0000822.1 MGP_LPJ_G0000753.1 mouse_genomes_project 1 195660480 195660973 - TEC TEC MGP_LPJ_T0100023.1 MGP_LPJ_G0038286.1 mouse_genomes_project 1 149150469 149150604 + Gm25663 snoRNA snoRNA MGP_LPJ_T0006025.1 MGP_LPJ_G0005049.1 mouse_genomes_project 1 188472698 188482188 - lincRNA lincRNA MGP_LPJ_T0100042.1 MGP_LPJ_G0038305.1 mouse_genomes_project 1 169589653 169589775 + Gm22434 snoRNA snoRNA MGP_LPJ_T0023705.1 MGP_LPJ_G0016770.1 mouse_genomes_project 1 185886294 185899811 - MGP_LPJ_P0023705 Hnrnpu protein_coding protein_coding MGP_LPJ_T0023706.1 MGP_LPJ_G0016770.1 mouse_genomes_project 1 185886783 185892272 - Hnrnpu protein_coding retained_intron MGP_LPJ_T0023707.1 MGP_LPJ_G0016770.1 mouse_genomes_project 1 185893817 185894878 - Hnrnpu protein_coding retained_intron MGP_LPJ_T0023708.1 MGP_LPJ_G0016770.1 mouse_genomes_project 1 185894054 185896498 - Hnrnpu protein_coding processed_transcript MGP_LPJ_T0023709.1 MGP_LPJ_G0016770.1 mouse_genomes_project 1 185897593 185898357 - Hnrnpu protein_coding retained_intron MGP_LPJ_T0005923.1 MGP_LPJ_G0004966.1 mouse_genomes_project 1 136977948 136980735 - 1700037F24Rik lincRNA lincRNA MGP_LPJ_T0019426.1 MGP_LPJ_G0015872.1 mouse_genomes_project 1 38619252 38631887 + MGP_LPJ_P0019426 Cnot11 protein_coding protein_coding MGP_LPJ_T0019427.1 MGP_LPJ_G0015872.1 mouse_genomes_project 1 38620062 38631871 + MGP_LPJ_P0019427 Cnot11 protein_coding protein_coding MGP_LPJ_T0019428.1 MGP_LPJ_G0015872.1 mouse_genomes_project 1 38622506 38631481 + Cnot11 protein_coding retained_intron MGP_LPJ_T0019429.1 MGP_LPJ_G0015872.1 mouse_genomes_project 1 38624295 38630399 + MGP_LPJ_P0019429 Cnot11 protein_coding protein_coding MGP_LPJ_T0000643.1 MGP_LPJ_G0000578.1 mouse_genomes_project 1 130818469 130819484 - TEC TEC MGP_LPJ_T0012212.1 MGP_LPJ_G0010303.1 mouse_genomes_project 1 123923273 123923636 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012272.1 MGP_LPJ_G0010363.1 mouse_genomes_project 1 153520019 153520491 + processed_pseudogene processed_pseudogene MGP_LPJ_T0023205.1 MGP_LPJ_G0016635.1 mouse_genomes_project 1 174801720 175133722 - MGP_LPJ_P0023205 Pbx1 protein_coding protein_coding MGP_LPJ_T0023206.1 MGP_LPJ_G0016635.1 mouse_genomes_project 1 174839161 175131675 - MGP_LPJ_P0023206 Pbx1 protein_coding protein_coding MGP_LPJ_T0023207.1 MGP_LPJ_G0016635.1 mouse_genomes_project 1 174845240 175131528 - MGP_LPJ_P0023207 Pbx1 protein_coding protein_coding MGP_LPJ_T0023208.1 MGP_LPJ_G0016635.1 mouse_genomes_project 1 174845280 174851591 - Pbx1 protein_coding processed_transcript MGP_LPJ_T0023209.1 MGP_LPJ_G0016635.1 mouse_genomes_project 1 174845642 175131279 - MGP_LPJ_P0023209 Pbx1 protein_coding protein_coding MGP_LPJ_T0023210.1 MGP_LPJ_G0016635.1 mouse_genomes_project 1 174870494 175131786 - MGP_LPJ_P0023210 Pbx1 protein_coding protein_coding MGP_LPJ_T0023211.1 MGP_LPJ_G0016635.1 mouse_genomes_project 1 174896341 175131435 - Pbx1 protein_coding retained_intron MGP_LPJ_T0023212.1 MGP_LPJ_G0016635.1 mouse_genomes_project 1 175124204 175131786 - Pbx1 protein_coding retained_intron MGP_LPJ_T0011997.1 MGP_LPJ_G0010088.1 mouse_genomes_project 1 43701352 43702341 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012077.1 MGP_LPJ_G0010168.1 mouse_genomes_project 1 65226552 65227017 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005857.1 MGP_LPJ_G0004913.1 mouse_genomes_project 1 93993720 94001229 - Gm26683 lincRNA lincRNA MGP_LPJ_T0012106.1 MGP_LPJ_G0010197.1 mouse_genomes_project 1 77360596 77361400 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021712.1 MGP_LPJ_G0016330.1 mouse_genomes_project 1 125694647 125714968 - MGP_LPJ_P0021712 Htr5b protein_coding protein_coding MGP_LPJ_T0023543.1 MGP_LPJ_G0016709.1 mouse_genomes_project 1 179538806 179548971 - MGP_LPJ_P0023543 Slamf8 protein_coding protein_coding MGP_LPJ_T0023544.1 MGP_LPJ_G0016709.1 mouse_genomes_project 1 179547381 179548852 - Slamf8 protein_coding retained_intron MGP_LPJ_T0022256.1 MGP_LPJ_G0016449.1 mouse_genomes_project 1 140855402 140871137 + MGP_LPJ_P0022256 Tnnt2 protein_coding protein_coding MGP_LPJ_T0022257.1 MGP_LPJ_G0016449.1 mouse_genomes_project 1 140855434 140871137 + MGP_LPJ_P0022257 Tnnt2 protein_coding protein_coding MGP_LPJ_T0022258.1 MGP_LPJ_G0016449.1 mouse_genomes_project 1 140855438 140858765 + Tnnt2 protein_coding retained_intron MGP_LPJ_T0022259.1 MGP_LPJ_G0016449.1 mouse_genomes_project 1 140855438 140863792 + Tnnt2 protein_coding retained_intron MGP_LPJ_T0022260.1 MGP_LPJ_G0016449.1 mouse_genomes_project 1 140855450 140867089 + MGP_LPJ_P0022260 Tnnt2 protein_coding protein_coding MGP_LPJ_T0022261.1 MGP_LPJ_G0016449.1 mouse_genomes_project 1 140855458 140871137 + MGP_LPJ_P0022261 Tnnt2 protein_coding protein_coding MGP_LPJ_T0022262.1 MGP_LPJ_G0016449.1 mouse_genomes_project 1 140855461 140871137 + MGP_LPJ_P0022262 Tnnt2 protein_coding protein_coding MGP_LPJ_T0022263.1 MGP_LPJ_G0016449.1 mouse_genomes_project 1 140859744 140868499 + MGP_LPJ_P0022263 Tnnt2 protein_coding protein_coding MGP_LPJ_T0022264.1 MGP_LPJ_G0016449.1 mouse_genomes_project 1 140859902 140871137 + MGP_LPJ_P0022264 Tnnt2 protein_coding protein_coding MGP_LPJ_T0022265.1 MGP_LPJ_G0016449.1 mouse_genomes_project 1 140859920 140871137 + MGP_LPJ_P0022265 Tnnt2 protein_coding protein_coding MGP_LPJ_T0022266.1 MGP_LPJ_G0016449.1 mouse_genomes_project 1 140859920 140871137 + MGP_LPJ_P0022266 Tnnt2 protein_coding protein_coding MGP_LPJ_T0022267.1 MGP_LPJ_G0016449.1 mouse_genomes_project 1 140859920 140871137 + MGP_LPJ_P0022267 Tnnt2 protein_coding protein_coding MGP_LPJ_T0022268.1 MGP_LPJ_G0016449.1 mouse_genomes_project 1 140859920 140871137 + MGP_LPJ_P0022268 Tnnt2 protein_coding protein_coding MGP_LPJ_T0022269.1 MGP_LPJ_G0016449.1 mouse_genomes_project 1 140859920 140871137 + MGP_LPJ_P0022269 Tnnt2 protein_coding protein_coding MGP_LPJ_T0022270.1 MGP_LPJ_G0016449.1 mouse_genomes_project 1 140868489 140868781 + Tnnt2 protein_coding retained_intron MGP_LPJ_T0005867.1 MGP_LPJ_G0004923.1 mouse_genomes_project 1 97737489 97743598 + 4930440C22Rik lincRNA lincRNA MGP_LPJ_T0005868.1 MGP_LPJ_G0004923.1 mouse_genomes_project 1 97737848 97743618 + 4930440C22Rik lincRNA lincRNA MGP_LPJ_T0020237.1 MGP_LPJ_G0016028.1 mouse_genomes_project 1 67671367 67903385 + MGP_LPJ_P0020237 Unc80 protein_coding protein_coding MGP_LPJ_T0020238.1 MGP_LPJ_G0016028.1 mouse_genomes_project 1 67671414 67710149 + MGP_LPJ_P0020238 Unc80 protein_coding nonsense_mediated_decay MGP_LPJ_T0020239.1 MGP_LPJ_G0016028.1 mouse_genomes_project 1 67671430 67690502 + Unc80 protein_coding retained_intron MGP_LPJ_T0020240.1 MGP_LPJ_G0016028.1 mouse_genomes_project 1 67726657 67902669 + MGP_LPJ_P0020240 Unc80 protein_coding unknown_likely_coding MGP_LPJ_T0020241.1 MGP_LPJ_G0016028.1 mouse_genomes_project 1 67726675 67902669 + MGP_LPJ_P0020241 Unc80 protein_coding unknown_likely_coding MGP_LPJ_T0020242.1 MGP_LPJ_G0016028.1 mouse_genomes_project 1 67877736 67878314 + Unc80 protein_coding retained_intron MGP_LPJ_T0020243.1 MGP_LPJ_G0016028.1 mouse_genomes_project 1 67883569 67900168 + MGP_LPJ_P0020243 Unc80 protein_coding protein_coding MGP_LPJ_T0018996.1 MGP_LPJ_G0015791.1 mouse_genomes_project 1 19110442 19122039 + MGP_LPJ_P0018996 Tmem14a protein_coding protein_coding MGP_LPJ_T0018997.1 MGP_LPJ_G0015791.1 mouse_genomes_project 1 19110529 19122036 + MGP_LPJ_P0018997 Tmem14a protein_coding protein_coding MGP_LPJ_T0023454.1 MGP_LPJ_G0016691.1 mouse_genomes_project 1 178984165 178989425 - MGP_LPJ_P0023454 Nhlh1 protein_coding protein_coding MGP_LPJ_T0016940.1 MGP_LPJ_G0015014.1 mouse_genomes_project 1 64232159 64239908 + Platr12 processed_transcript antisense MGP_LPJ_T0016941.1 MGP_LPJ_G0015014.1 mouse_genomes_project 1 64232554 64240261 + Platr12 processed_transcript lincRNA MGP_LPJ_T0019583.1 MGP_LPJ_G0015906.1 mouse_genomes_project 1 44695916 44711897 + Col3a1 protein_coding retained_intron MGP_LPJ_T0019584.1 MGP_LPJ_G0015906.1 mouse_genomes_project 1 44695916 44738653 + MGP_LPJ_P0019584 Col3a1 protein_coding protein_coding MGP_LPJ_T0019585.1 MGP_LPJ_G0015906.1 mouse_genomes_project 1 44696025 44701357 + Col3a1 protein_coding processed_transcript MGP_LPJ_T0019586.1 MGP_LPJ_G0015906.1 mouse_genomes_project 1 44714467 44715773 + Col3a1 protein_coding retained_intron MGP_LPJ_T0019587.1 MGP_LPJ_G0015906.1 mouse_genomes_project 1 44720792 44723890 + Col3a1 protein_coding retained_intron MGP_LPJ_T0019588.1 MGP_LPJ_G0015906.1 mouse_genomes_project 1 44722358 44728802 + MGP_LPJ_P0019588 Col3a1 protein_coding protein_coding MGP_LPJ_T0019589.1 MGP_LPJ_G0015906.1 mouse_genomes_project 1 44728085 44736713 + MGP_LPJ_P0019589 Col3a1 protein_coding protein_coding MGP_LPJ_T0021459.1 MGP_LPJ_G0016275.1 mouse_genomes_project 1 99820391 99878841 - MGP_LPJ_P0021459 Slco4c1 protein_coding protein_coding MGP_LPJ_T0012290.1 MGP_LPJ_G0010381.1 mouse_genomes_project 1 160338284 160338835 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023643.1 MGP_LPJ_G0016758.1 mouse_genomes_project 1 183171116 183203872 + MGP_LPJ_P0023643 Exo1 protein_coding protein_coding MGP_LPJ_T0023644.1 MGP_LPJ_G0016758.1 mouse_genomes_project 1 183171329 183178173 + MGP_LPJ_P0023644 Exo1 protein_coding protein_coding MGP_LPJ_T0023645.1 MGP_LPJ_G0016758.1 mouse_genomes_project 1 183171331 183181869 + MGP_LPJ_P0023645 Exo1 protein_coding protein_coding MGP_LPJ_T0023646.1 MGP_LPJ_G0016758.1 mouse_genomes_project 1 183171348 183181891 + MGP_LPJ_P0023646 Exo1 protein_coding protein_coding MGP_LPJ_T0023647.1 MGP_LPJ_G0016758.1 mouse_genomes_project 1 183171714 183181887 + MGP_LPJ_P0023647 Exo1 protein_coding protein_coding MGP_LPJ_T0023648.1 MGP_LPJ_G0016758.1 mouse_genomes_project 1 183182688 183190720 + MGP_LPJ_P0023648 Exo1 protein_coding protein_coding MGP_LPJ_T0023649.1 MGP_LPJ_G0016758.1 mouse_genomes_project 1 183191170 183199104 + MGP_LPJ_P0023649 Exo1 protein_coding protein_coding MGP_LPJ_T0023650.1 MGP_LPJ_G0016758.1 mouse_genomes_project 1 183193974 183198921 + Exo1 protein_coding retained_intron MGP_LPJ_T0023651.1 MGP_LPJ_G0016758.1 mouse_genomes_project 1 183194112 183196591 + MGP_LPJ_P0023651 Exo1 protein_coding protein_coding MGP_LPJ_T0023652.1 MGP_LPJ_G0016758.1 mouse_genomes_project 1 183197962 183199116 + Exo1 protein_coding processed_transcript MGP_LPJ_T0012270.1 MGP_LPJ_G0010361.1 mouse_genomes_project 1 150717493 150717886 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012172.1 MGP_LPJ_G0010263.1 mouse_genomes_project 1 109490261 109491209 + processed_pseudogene processed_pseudogene MGP_LPJ_T0024113.1 MGP_LPJ_G0016850.1 mouse_genomes_project 1 199133743 199168253 - MGP_LPJ_P0024113 Vash2 protein_coding protein_coding MGP_LPJ_T0024114.1 MGP_LPJ_G0016850.1 mouse_genomes_project 1 199133745 199167959 - MGP_LPJ_P0024114 Vash2 protein_coding protein_coding MGP_LPJ_T0024115.1 MGP_LPJ_G0016850.1 mouse_genomes_project 1 199136281 199168198 - MGP_LPJ_P0024115 Vash2 protein_coding unknown_likely_coding MGP_LPJ_T0024116.1 MGP_LPJ_G0016850.1 mouse_genomes_project 1 199161858 199168171 - Vash2 protein_coding processed_transcript MGP_LPJ_T0021858.1 MGP_LPJ_G0016360.1 mouse_genomes_project 1 135515336 135529153 + MGP_LPJ_P0021858 Fcamr protein_coding protein_coding MGP_LPJ_T0021859.1 MGP_LPJ_G0016360.1 mouse_genomes_project 1 135515336 135529121 + MGP_LPJ_P0021859 Fcamr protein_coding protein_coding MGP_LPJ_T0002942.1 MGP_LPJ_G0002768.1 mouse_genomes_project 1 162365403 162366886 + 4930518J20Rik antisense antisense MGP_LPJ_T0019737.1 MGP_LPJ_G0015936.1 mouse_genomes_project 1 54147515 54157323 - protein_coding processed_transcript MGP_LPJ_T0024019.1 MGP_LPJ_G0016834.1 mouse_genomes_project 1 194002882 194030172 - MGP_LPJ_P0024019 Lyplal1 protein_coding protein_coding MGP_LPJ_T0024020.1 MGP_LPJ_G0016834.1 mouse_genomes_project 1 194003684 194030150 - Lyplal1 protein_coding processed_transcript MGP_LPJ_T0012191.1 MGP_LPJ_G0010282.1 mouse_genomes_project 1 115779427 115779990 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005795.1 MGP_LPJ_G0004865.1 mouse_genomes_project 1 73406366 73413519 + lincRNA lincRNA MGP_LPJ_T0005796.1 MGP_LPJ_G0004865.1 mouse_genomes_project 1 73406371 73413050 + lincRNA lincRNA MGP_LPJ_T0005797.1 MGP_LPJ_G0004865.1 mouse_genomes_project 1 73406757 73412902 + lincRNA lincRNA MGP_LPJ_T0000431.1 MGP_LPJ_G0000369.1 mouse_genomes_project 1 17906243 17909655 - TEC TEC MGP_LPJ_T0023548.1 MGP_LPJ_G0016711.1 mouse_genomes_project 1 179595400 179597608 - MGP_LPJ_P0023548 Dusp23 protein_coding protein_coding MGP_LPJ_T0012319.1 MGP_LPJ_G0010410.1 mouse_genomes_project 1 172646164 172646517 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101716.1 MGP_LPJ_G0039754.1 mouse_genomes_project 1 136669214 136670007 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0019785.1 MGP_LPJ_G0015945.1 mouse_genomes_project 1 55616978 55628721 - MGP_LPJ_P0019785 protein_coding protein_coding MGP_LPJ_T0019786.1 MGP_LPJ_G0015945.1 mouse_genomes_project 1 55623763 55628940 - MGP_LPJ_P0019786 protein_coding protein_coding MGP_LPJ_T0019787.1 MGP_LPJ_G0015945.1 mouse_genomes_project 1 55625229 55628940 - MGP_LPJ_P0019787 protein_coding protein_coding MGP_LPJ_T0009568.1 MGP_LPJ_G0007686.1 mouse_genomes_project 1 177945411 177945473 - Gm27844 miRNA miRNA MGP_LPJ_T0000534.1 MGP_LPJ_G0000469.1 mouse_genomes_project 1 67894108 67895854 - TEC TEC MGP_LPJ_T0000709.1 MGP_LPJ_G0000642.1 mouse_genomes_project 1 155006689 155008145 - TEC TEC MGP_LPJ_T0098440.1 MGP_LPJ_G0036721.1 mouse_genomes_project 1 37086220 37087231 - Gm37062 sense_intronic sense_intronic MGP_LPJ_T0020294.1 MGP_LPJ_G0016038.1 mouse_genomes_project 1 72186963 72351510 + MGP_LPJ_P0020294 Vwc2l protein_coding protein_coding MGP_LPJ_T0020295.1 MGP_LPJ_G0016038.1 mouse_genomes_project 1 72187000 72193451 + Vwc2l protein_coding retained_intron MGP_LPJ_T0020296.1 MGP_LPJ_G0016038.1 mouse_genomes_project 1 72187150 72351495 + MGP_LPJ_P0020296 Vwc2l protein_coding protein_coding MGP_LPJ_T0020297.1 MGP_LPJ_G0016038.1 mouse_genomes_project 1 72187171 72348602 + MGP_LPJ_P0020297 Vwc2l protein_coding protein_coding MGP_LPJ_T0002822.1 MGP_LPJ_G0002678.1 mouse_genomes_project 1 42405328 42406576 + 8430432A02Rik antisense antisense MGP_LPJ_T0011937.1 MGP_LPJ_G0010028.1 mouse_genomes_project 1 22981608 22982806 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002803.1 MGP_LPJ_G0002663.1 mouse_genomes_project 1 36078838 36079830 - Gm37020 antisense antisense MGP_LPJ_T0009550.1 MGP_LPJ_G0007668.1 mouse_genomes_project 1 140456990 140457071 - Mir1231 miRNA miRNA MGP_LPJ_T0023935.1 MGP_LPJ_G0016816.1 mouse_genomes_project 1 190902698 191050836 - MGP_LPJ_P0023935 Disp1 protein_coding protein_coding MGP_LPJ_T0023936.1 MGP_LPJ_G0016816.1 mouse_genomes_project 1 190902698 190970755 - MGP_LPJ_P0023936 Disp1 protein_coding protein_coding MGP_LPJ_T0023937.1 MGP_LPJ_G0016816.1 mouse_genomes_project 1 190902698 191050831 - MGP_LPJ_P0023937 Disp1 protein_coding protein_coding MGP_LPJ_T0023938.1 MGP_LPJ_G0016816.1 mouse_genomes_project 1 190912620 190970825 - Disp1 protein_coding retained_intron MGP_LPJ_T0023939.1 MGP_LPJ_G0016816.1 mouse_genomes_project 1 190956727 191050868 - MGP_LPJ_P0023939 Disp1 protein_coding protein_coding MGP_LPJ_T0023582.1 MGP_LPJ_G0016729.1 mouse_genomes_project 1 180766713 180784765 - MGP_LPJ_P0023582 AI607873 protein_coding protein_coding MGP_LPJ_T0005827.1 MGP_LPJ_G0004887.1 mouse_genomes_project 1 82134318 82142453 + 9830004L10Rik lincRNA lincRNA MGP_LPJ_T0005828.1 MGP_LPJ_G0004887.1 mouse_genomes_project 1 82140431 82142498 + 9830004L10Rik lincRNA lincRNA MGP_LPJ_T0003008.1 MGP_LPJ_G0002823.1 mouse_genomes_project 1 198310940 198359988 + Prox1os antisense antisense MGP_LPJ_T0000395.1 MGP_LPJ_G0000333.1 mouse_genomes_project 1 2168520 2170635 - TEC TEC MGP_LPJ_T0022677.1 MGP_LPJ_G0016532.1 mouse_genomes_project 1 161636557 161650515 + MGP_LPJ_P0022677 Acbd6 protein_coding protein_coding MGP_LPJ_T0022678.1 MGP_LPJ_G0016532.1 mouse_genomes_project 1 161636559 161774370 + MGP_LPJ_P0022678 Acbd6 protein_coding protein_coding MGP_LPJ_T0022679.1 MGP_LPJ_G0016532.1 mouse_genomes_project 1 161636563 161666040 + MGP_LPJ_P0022679 Acbd6 protein_coding protein_coding MGP_LPJ_T0022680.1 MGP_LPJ_G0016532.1 mouse_genomes_project 1 161641592 161770183 + Acbd6 protein_coding processed_transcript MGP_LPJ_T0022681.1 MGP_LPJ_G0016532.1 mouse_genomes_project 1 161645696 161650486 + Acbd6 protein_coding retained_intron MGP_LPJ_T0022682.1 MGP_LPJ_G0016532.1 mouse_genomes_project 1 161770078 161771399 + MGP_LPJ_P0022682 Acbd6 protein_coding nonsense_mediated_decay MGP_LPJ_T0000798.1 MGP_LPJ_G0000730.1 mouse_genomes_project 1 188044317 188051708 + TEC TEC MGP_LPJ_T0006017.1 MGP_LPJ_G0005042.1 mouse_genomes_project 1 183602830 183606393 + Gm38101 lincRNA lincRNA MGP_LPJ_T0023229.1 MGP_LPJ_G0016641.1 mouse_genomes_project 1 176719260 176859703 - MGP_LPJ_P0023229 Ddr2 protein_coding protein_coding MGP_LPJ_T0023230.1 MGP_LPJ_G0016641.1 mouse_genomes_project 1 176719261 176838542 - MGP_LPJ_P0023230 Ddr2 protein_coding protein_coding MGP_LPJ_T0023231.1 MGP_LPJ_G0016641.1 mouse_genomes_project 1 176724905 176859643 - MGP_LPJ_P0023231 Ddr2 protein_coding protein_coding MGP_LPJ_T0023232.1 MGP_LPJ_G0016641.1 mouse_genomes_project 1 176752929 176859871 - MGP_LPJ_P0023232 Ddr2 protein_coding protein_coding MGP_LPJ_T0023233.1 MGP_LPJ_G0016641.1 mouse_genomes_project 1 176783134 176859904 - Ddr2 protein_coding retained_intron MGP_LPJ_T0023234.1 MGP_LPJ_G0016641.1 mouse_genomes_project 1 176833253 176846910 - Ddr2 protein_coding processed_transcript MGP_LPJ_T0023152.1 MGP_LPJ_G0016619.1 mouse_genomes_project 1 172732917 172773865 + MGP_LPJ_P0023152 Gpa33 protein_coding protein_coding MGP_LPJ_T0023153.1 MGP_LPJ_G0016619.1 mouse_genomes_project 1 172733019 172764880 + MGP_LPJ_P0023153 Gpa33 protein_coding protein_coding MGP_LPJ_T0023154.1 MGP_LPJ_G0016619.1 mouse_genomes_project 1 172733096 172761487 + Gpa33 protein_coding processed_transcript MGP_LPJ_T0023155.1 MGP_LPJ_G0016619.1 mouse_genomes_project 1 172733146 172773864 + MGP_LPJ_P0023155 Gpa33 protein_coding protein_coding MGP_LPJ_T0000749.1 MGP_LPJ_G0000682.1 mouse_genomes_project 1 166970901 166973191 - TEC TEC MGP_LPJ_T0021503.1 MGP_LPJ_G0016284.1 mouse_genomes_project 1 108635505 108723834 - MGP_LPJ_P0021503 Rnf152 protein_coding protein_coding MGP_LPJ_T0021504.1 MGP_LPJ_G0016284.1 mouse_genomes_project 1 108635508 108723874 - MGP_LPJ_P0021504 Rnf152 protein_coding protein_coding MGP_LPJ_T0012142.1 MGP_LPJ_G0010233.1 mouse_genomes_project 1 95190587 95190999 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006062.1 MGP_LPJ_G0005075.1 mouse_genomes_project 1 194097900 194148320 + Gm37134 lincRNA lincRNA MGP_LPJ_T0000468.1 MGP_LPJ_G0000404.1 mouse_genomes_project 1 32309567 32312339 - TEC TEC MGP_LPJ_T0021148.1 MGP_LPJ_G0016207.1 mouse_genomes_project 1 92527600 92530824 - MGP_LPJ_P0021148 Gbx2 protein_coding protein_coding MGP_LPJ_T0021149.1 MGP_LPJ_G0016207.1 mouse_genomes_project 1 92527610 92528830 - Gbx2 protein_coding retained_intron MGP_LPJ_T0012265.1 MGP_LPJ_G0010356.1 mouse_genomes_project 1 149599788 149601460 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000398.1 MGP_LPJ_G0000336.1 mouse_genomes_project 1 4158504 4162281 - TEC TEC MGP_LPJ_T0000409.1 MGP_LPJ_G0000347.1 mouse_genomes_project 1 8301472 8303395 - TEC TEC MGP_LPJ_T0000681.1 MGP_LPJ_G0000615.1 mouse_genomes_project 1 142857744 142861652 - TEC TEC MGP_LPJ_T0021806.1 MGP_LPJ_G0016346.1 mouse_genomes_project 1 132824798 132841160 + MGP_LPJ_P0021806 Ubxn4 protein_coding protein_coding MGP_LPJ_T0021807.1 MGP_LPJ_G0016346.1 mouse_genomes_project 1 132824996 132865568 + MGP_LPJ_P0021807 Ubxn4 protein_coding protein_coding MGP_LPJ_T0021808.1 MGP_LPJ_G0016346.1 mouse_genomes_project 1 132841128 132859356 + Ubxn4 protein_coding retained_intron MGP_LPJ_T0021809.1 MGP_LPJ_G0016346.1 mouse_genomes_project 1 132860816 132863210 + Ubxn4 protein_coding retained_intron MGP_LPJ_T0012145.1 MGP_LPJ_G0010236.1 mouse_genomes_project 1 97131371 97132213 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005965.1 MGP_LPJ_G0005001.1 mouse_genomes_project 1 160043347 160050265 - Gm28286 lincRNA lincRNA MGP_LPJ_T0021323.1 MGP_LPJ_G0016246.1 mouse_genomes_project 1 95723207 95736714 + MGP_LPJ_P0021323 Capn10 protein_coding protein_coding MGP_LPJ_T0021324.1 MGP_LPJ_G0016246.1 mouse_genomes_project 1 95723597 95729799 + MGP_LPJ_P0021324 Capn10 protein_coding protein_coding MGP_LPJ_T0021325.1 MGP_LPJ_G0016246.1 mouse_genomes_project 1 95723664 95736702 + MGP_LPJ_P0021325 Capn10 protein_coding nonsense_mediated_decay MGP_LPJ_T0021326.1 MGP_LPJ_G0016246.1 mouse_genomes_project 1 95729285 95733876 + MGP_LPJ_P0021326 Capn10 protein_coding nonsense_mediated_decay MGP_LPJ_T0021327.1 MGP_LPJ_G0016246.1 mouse_genomes_project 1 95731476 95732517 + Capn10 protein_coding retained_intron MGP_LPJ_T0021328.1 MGP_LPJ_G0016246.1 mouse_genomes_project 1 95735325 95735728 + Capn10 protein_coding processed_transcript MGP_LPJ_T0021329.1 MGP_LPJ_G0016246.1 mouse_genomes_project 1 95735657 95736363 + Capn10 protein_coding retained_intron MGP_LPJ_T0024155.1 MGP_LPJ_G0016861.1 mouse_genomes_project 1 199784884 199825251 - MGP_LPJ_P0024155 Dtl protein_coding nonsense_mediated_decay MGP_LPJ_T0024156.1 MGP_LPJ_G0016861.1 mouse_genomes_project 1 199784893 199825274 - MGP_LPJ_P0024156 Dtl protein_coding protein_coding MGP_LPJ_T0024157.1 MGP_LPJ_G0016861.1 mouse_genomes_project 1 199786641 199825244 - Dtl protein_coding processed_transcript MGP_LPJ_T0024158.1 MGP_LPJ_G0016861.1 mouse_genomes_project 1 199797310 199825243 - MGP_LPJ_P0024158 Dtl protein_coding nonsense_mediated_decay MGP_LPJ_T0024159.1 MGP_LPJ_G0016861.1 mouse_genomes_project 1 199808554 199825241 - Dtl protein_coding retained_intron MGP_LPJ_T0024160.1 MGP_LPJ_G0016861.1 mouse_genomes_project 1 199820390 199825243 - Dtl protein_coding retained_intron MGP_LPJ_T0012150.1 MGP_LPJ_G0010241.1 mouse_genomes_project 1 101347149 101347437 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101728.1 MGP_LPJ_G0039766.1 mouse_genomes_project 1 180758572 180761343 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0012291.1 MGP_LPJ_G0010382.1 mouse_genomes_project 1 161076627 161076839 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012257.1 MGP_LPJ_G0010348.1 mouse_genomes_project 1 144279112 144279887 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000817.1 MGP_LPJ_G0000748.1 mouse_genomes_project 1 194288289 194289400 + TEC TEC MGP_LPJ_T0005978.1 MGP_LPJ_G0005010.1 mouse_genomes_project 1 165363509 165400625 + 4930562F17Rik lincRNA lincRNA MGP_LPJ_T0016928.1 MGP_LPJ_G0015008.1 mouse_genomes_project 1 38632567 38637005 - Gm15832 processed_transcript processed_transcript MGP_LPJ_T0020384.1 MGP_LPJ_G0016060.1 mouse_genomes_project 1 75968929 75975359 - MGP_LPJ_P0020384 Aamp protein_coding protein_coding MGP_LPJ_T0020385.1 MGP_LPJ_G0016060.1 mouse_genomes_project 1 75968935 75974637 - Aamp protein_coding retained_intron MGP_LPJ_T0020386.1 MGP_LPJ_G0016060.1 mouse_genomes_project 1 75968935 75975301 - MGP_LPJ_P0020386 Aamp protein_coding protein_coding MGP_LPJ_T0020387.1 MGP_LPJ_G0016060.1 mouse_genomes_project 1 75970022 75974600 - MGP_LPJ_P0020387 Aamp protein_coding protein_coding MGP_LPJ_T0020388.1 MGP_LPJ_G0016060.1 mouse_genomes_project 1 75970149 75972232 - Aamp protein_coding retained_intron MGP_LPJ_T0020389.1 MGP_LPJ_G0016060.1 mouse_genomes_project 1 75972285 75975042 - MGP_LPJ_P0020389 Aamp protein_coding protein_coding MGP_LPJ_T0099999.1 MGP_LPJ_G0038262.1 mouse_genomes_project 1 97548076 97548145 - Gm23389 snoRNA snoRNA MGP_LPJ_T0002963.1 MGP_LPJ_G0002784.1 mouse_genomes_project 1 172037551 172038928 - Gm38325 antisense antisense MGP_LPJ_T0023133.1 MGP_LPJ_G0016617.1 mouse_genomes_project 1 172440662 172590841 - MGP_LPJ_P0023133 Pou2f1 protein_coding protein_coding MGP_LPJ_T0023134.1 MGP_LPJ_G0016617.1 mouse_genomes_project 1 172440662 172512784 - MGP_LPJ_P0023134 Pou2f1 protein_coding protein_coding MGP_LPJ_T0023135.1 MGP_LPJ_G0016617.1 mouse_genomes_project 1 172450929 172491250 - MGP_LPJ_P0023135 Pou2f1 protein_coding protein_coding MGP_LPJ_T0023136.1 MGP_LPJ_G0016617.1 mouse_genomes_project 1 172450963 172590781 - MGP_LPJ_P0023136 Pou2f1 protein_coding protein_coding MGP_LPJ_T0023137.1 MGP_LPJ_G0016617.1 mouse_genomes_project 1 172450963 172590785 - MGP_LPJ_P0023137 Pou2f1 protein_coding protein_coding MGP_LPJ_T0023138.1 MGP_LPJ_G0016617.1 mouse_genomes_project 1 172450967 172512784 - MGP_LPJ_P0023138 Pou2f1 protein_coding protein_coding MGP_LPJ_T0023139.1 MGP_LPJ_G0016617.1 mouse_genomes_project 1 172450994 172455667 - MGP_LPJ_P0023139 Pou2f1 protein_coding protein_coding MGP_LPJ_T0023140.1 MGP_LPJ_G0016617.1 mouse_genomes_project 1 172451090 172470167 - Pou2f1 protein_coding retained_intron MGP_LPJ_T0023141.1 MGP_LPJ_G0016617.1 mouse_genomes_project 1 172451114 172590792 - MGP_LPJ_P0023141 Pou2f1 protein_coding protein_coding MGP_LPJ_T0023142.1 MGP_LPJ_G0016617.1 mouse_genomes_project 1 172451188 172512736 - MGP_LPJ_P0023142 Pou2f1 protein_coding protein_coding MGP_LPJ_T0023143.1 MGP_LPJ_G0016617.1 mouse_genomes_project 1 172451244 172509614 - MGP_LPJ_P0023143 Pou2f1 protein_coding protein_coding MGP_LPJ_T0023144.1 MGP_LPJ_G0016617.1 mouse_genomes_project 1 172455433 172512847 - Pou2f1 protein_coding retained_intron MGP_LPJ_T0023145.1 MGP_LPJ_G0016617.1 mouse_genomes_project 1 172455588 172512775 - Pou2f1 protein_coding retained_intron MGP_LPJ_T0023146.1 MGP_LPJ_G0016617.1 mouse_genomes_project 1 172465719 172590778 - Pou2f1 protein_coding retained_intron MGP_LPJ_T0023147.1 MGP_LPJ_G0016617.1 mouse_genomes_project 1 172489289 172590776 - MGP_LPJ_P0023147 Pou2f1 protein_coding protein_coding MGP_LPJ_T0023148.1 MGP_LPJ_G0016617.1 mouse_genomes_project 1 172507558 172590792 - Pou2f1 protein_coding retained_intron MGP_LPJ_T0023149.1 MGP_LPJ_G0016617.1 mouse_genomes_project 1 172509593 172590772 - MGP_LPJ_P0023149 Pou2f1 protein_coding protein_coding MGP_LPJ_T0012324.1 MGP_LPJ_G0010415.1 mouse_genomes_project 1 173929826 173930193 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012373.1 MGP_LPJ_G0010464.1 mouse_genomes_project 1 201139959 201140561 + processed_pseudogene processed_pseudogene MGP_LPJ_T0022594.1 MGP_LPJ_G0016515.1 mouse_genomes_project 1 159404610 159436494 - MGP_LPJ_P0022594 Dhx9 protein_coding protein_coding MGP_LPJ_T0022595.1 MGP_LPJ_G0016515.1 mouse_genomes_project 1 159404610 159436546 - MGP_LPJ_P0022595 Dhx9 protein_coding protein_coding MGP_LPJ_T0022596.1 MGP_LPJ_G0016515.1 mouse_genomes_project 1 159411462 159436531 - MGP_LPJ_P0022596 Dhx9 protein_coding nonsense_mediated_decay MGP_LPJ_T0022597.1 MGP_LPJ_G0016515.1 mouse_genomes_project 1 159411468 159427018 - MGP_LPJ_P0022597 Dhx9 protein_coding nonsense_mediated_decay MGP_LPJ_T0022598.1 MGP_LPJ_G0016515.1 mouse_genomes_project 1 159413074 159436537 - MGP_LPJ_P0022598 Dhx9 protein_coding protein_coding MGP_LPJ_T0022599.1 MGP_LPJ_G0016515.1 mouse_genomes_project 1 159421005 159427032 - Dhx9 protein_coding retained_intron MGP_LPJ_T0022600.1 MGP_LPJ_G0016515.1 mouse_genomes_project 1 159425717 159436544 - Dhx9 protein_coding retained_intron MGP_LPJ_T0022601.1 MGP_LPJ_G0016515.1 mouse_genomes_project 1 159427156 159429412 - Dhx9 protein_coding retained_intron MGP_LPJ_T0022602.1 MGP_LPJ_G0016515.1 mouse_genomes_project 1 159431252 159436520 - Dhx9 protein_coding retained_intron MGP_LPJ_T0002834.1 MGP_LPJ_G0002688.1 mouse_genomes_project 1 59844131 59890455 + Gm29018 antisense antisense MGP_LPJ_T0002835.1 MGP_LPJ_G0002688.1 mouse_genomes_project 1 59867388 59869240 + Gm29018 antisense antisense MGP_LPJ_T0005680.1 MGP_LPJ_G0004779.1 mouse_genomes_project 1 16094592 16100624 + lincRNA lincRNA MGP_LPJ_T0023600.1 MGP_LPJ_G0016743.1 mouse_genomes_project 1 181319017 181320063 + MGP_LPJ_P0023600 Olfr420 protein_coding protein_coding MGP_LPJ_T0099995.1 MGP_LPJ_G0038258.1 mouse_genomes_project 1 88430821 88430943 + Gm22786 snoRNA snoRNA MGP_LPJ_T0011996.1 MGP_LPJ_G0010087.1 mouse_genomes_project 1 43580968 43581925 + processed_pseudogene processed_pseudogene MGP_LPJ_T0018759.1 MGP_LPJ_G0015744.1 mouse_genomes_project 1 7265917 7375374 + MGP_LPJ_P0018759 Sgk3 protein_coding protein_coding MGP_LPJ_T0018760.1 MGP_LPJ_G0015744.1 mouse_genomes_project 1 7265953 7375376 + MGP_LPJ_P0018760 Sgk3 protein_coding protein_coding MGP_LPJ_T0018761.1 MGP_LPJ_G0015744.1 mouse_genomes_project 1 7265953 7375301 + MGP_LPJ_P0018761 Sgk3 protein_coding nonsense_mediated_decay MGP_LPJ_T0018762.1 MGP_LPJ_G0015744.1 mouse_genomes_project 1 7265968 7299919 + Sgk3 protein_coding retained_intron MGP_LPJ_T0018763.1 MGP_LPJ_G0015744.1 mouse_genomes_project 1 7265995 7374149 + MGP_LPJ_P0018763 Sgk3 protein_coding nonsense_mediated_decay MGP_LPJ_T0018764.1 MGP_LPJ_G0015744.1 mouse_genomes_project 1 7266018 7374539 + MGP_LPJ_P0018764 Sgk3 protein_coding nonsense_mediated_decay MGP_LPJ_T0018765.1 MGP_LPJ_G0015744.1 mouse_genomes_project 1 7319618 7375374 + MGP_LPJ_P0018765 Sgk3 protein_coding protein_coding MGP_LPJ_T0018766.1 MGP_LPJ_G0015744.1 mouse_genomes_project 1 7319667 7337286 + Sgk3 protein_coding processed_transcript MGP_LPJ_T0018767.1 MGP_LPJ_G0015744.1 mouse_genomes_project 1 7319667 7344197 + Sgk3 protein_coding retained_intron MGP_LPJ_T0018768.1 MGP_LPJ_G0015744.1 mouse_genomes_project 1 7319743 7374384 + MGP_LPJ_P0018768 Sgk3 protein_coding protein_coding MGP_LPJ_T0018769.1 MGP_LPJ_G0015744.1 mouse_genomes_project 1 7357163 7362871 + Sgk3 protein_coding retained_intron MGP_LPJ_T0018770.1 MGP_LPJ_G0015744.1 mouse_genomes_project 1 7369969 7373718 + Sgk3 protein_coding retained_intron MGP_LPJ_T0019918.1 MGP_LPJ_G0015970.1 mouse_genomes_project 1 59358143 59367361 + MGP_LPJ_P0019918 Ndufb3 protein_coding protein_coding MGP_LPJ_T0019523.1 MGP_LPJ_G0015896.1 mouse_genomes_project 1 43090386 43176711 - MGP_LPJ_P0019523 Uxs1 protein_coding protein_coding MGP_LPJ_T0019524.1 MGP_LPJ_G0015896.1 mouse_genomes_project 1 43092932 43176652 - MGP_LPJ_P0019524 Uxs1 protein_coding nonsense_mediated_decay MGP_LPJ_T0019525.1 MGP_LPJ_G0015896.1 mouse_genomes_project 1 43112536 43176711 - MGP_LPJ_P0019525 Uxs1 protein_coding protein_coding MGP_LPJ_T0019526.1 MGP_LPJ_G0015896.1 mouse_genomes_project 1 43119259 43175927 - Uxs1 protein_coding processed_transcript MGP_LPJ_T0019527.1 MGP_LPJ_G0015896.1 mouse_genomes_project 1 43119259 43176661 - MGP_LPJ_P0019527 Uxs1 protein_coding protein_coding MGP_LPJ_T0019528.1 MGP_LPJ_G0015896.1 mouse_genomes_project 1 43122395 43176673 - Uxs1 protein_coding processed_transcript MGP_LPJ_T0019529.1 MGP_LPJ_G0015896.1 mouse_genomes_project 1 43127947 43176673 - MGP_LPJ_P0019529 Uxs1 protein_coding nonsense_mediated_decay MGP_LPJ_T0019530.1 MGP_LPJ_G0015896.1 mouse_genomes_project 1 43138380 43176685 - MGP_LPJ_P0019530 Uxs1 protein_coding protein_coding MGP_LPJ_T0100043.1 MGP_LPJ_G0038306.1 mouse_genomes_project 1 171990655 171990740 + Gm24637 snoRNA snoRNA MGP_LPJ_T0101740.1 MGP_LPJ_G0039778.1 mouse_genomes_project 1 188710307 188710439 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0017019.1 MGP_LPJ_G0015035.1 mouse_genomes_project 1 171402729 171412969 + Gm20743 processed_transcript lincRNA MGP_LPJ_T0017020.1 MGP_LPJ_G0015035.1 mouse_genomes_project 1 171402954 171479290 + Gm20743 processed_transcript antisense MGP_LPJ_T0002814.1 MGP_LPJ_G0002671.1 mouse_genomes_project 1 37934402 37940061 + antisense antisense MGP_LPJ_T0005678.1 MGP_LPJ_G0004777.1 mouse_genomes_project 1 14844877 14850039 + Gm28783 lincRNA lincRNA MGP_LPJ_T0024269.1 MGP_LPJ_G0016880.1 mouse_genomes_project 1 201622491 201646371 - MGP_LPJ_P0024269 Camk1g protein_coding protein_coding MGP_LPJ_T0024270.1 MGP_LPJ_G0016880.1 mouse_genomes_project 1 201622491 201646444 - MGP_LPJ_P0024270 Camk1g protein_coding protein_coding MGP_LPJ_T0024271.1 MGP_LPJ_G0016880.1 mouse_genomes_project 1 201624906 201635924 - MGP_LPJ_P0024271 Camk1g protein_coding protein_coding MGP_LPJ_T0024272.1 MGP_LPJ_G0016880.1 mouse_genomes_project 1 201630941 201646391 - Camk1g protein_coding retained_intron MGP_LPJ_T0009522.1 MGP_LPJ_G0007640.1 mouse_genomes_project 1 79299785 79299901 - Mir6352 miRNA miRNA MGP_LPJ_T0012089.1 MGP_LPJ_G0010180.1 mouse_genomes_project 1 68178785 68180425 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021379.1 MGP_LPJ_G0016258.1 mouse_genomes_project 1 96208211 96283816 - MGP_LPJ_P0021379 Hdlbp protein_coding protein_coding MGP_LPJ_T0021380.1 MGP_LPJ_G0016258.1 mouse_genomes_project 1 96210033 96247666 - MGP_LPJ_P0021380 Hdlbp protein_coding protein_coding MGP_LPJ_T0021381.1 MGP_LPJ_G0016258.1 mouse_genomes_project 1 96210273 96242768 - MGP_LPJ_P0021381 Hdlbp protein_coding protein_coding MGP_LPJ_T0021382.1 MGP_LPJ_G0016258.1 mouse_genomes_project 1 96230472 96247632 - Hdlbp protein_coding retained_intron MGP_LPJ_T0021383.1 MGP_LPJ_G0016258.1 mouse_genomes_project 1 96232922 96247662 - MGP_LPJ_P0021383 Hdlbp protein_coding protein_coding MGP_LPJ_T0021384.1 MGP_LPJ_G0016258.1 mouse_genomes_project 1 96233339 96242937 - MGP_LPJ_P0021384 Hdlbp protein_coding protein_coding MGP_LPJ_T0021385.1 MGP_LPJ_G0016258.1 mouse_genomes_project 1 96239095 96247412 - MGP_LPJ_P0021385 Hdlbp protein_coding protein_coding MGP_LPJ_T0021386.1 MGP_LPJ_G0016258.1 mouse_genomes_project 1 96239131 96283830 - MGP_LPJ_P0021386 Hdlbp protein_coding protein_coding MGP_LPJ_T0021387.1 MGP_LPJ_G0016258.1 mouse_genomes_project 1 96242273 96247629 - Hdlbp protein_coding retained_intron MGP_LPJ_T0021388.1 MGP_LPJ_G0016258.1 mouse_genomes_project 1 96242663 96283391 - MGP_LPJ_P0021388 Hdlbp protein_coding protein_coding MGP_LPJ_T0021389.1 MGP_LPJ_G0016258.1 mouse_genomes_project 1 96280185 96283394 - Hdlbp protein_coding retained_intron MGP_LPJ_T0012113.1 MGP_LPJ_G0010204.1 mouse_genomes_project 1 82345198 82347280 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023585.1 MGP_LPJ_G0016732.1 mouse_genomes_project 1 180907106 180996270 - MGP_LPJ_P0023585 Mndal protein_coding protein_coding MGP_LPJ_T0023587.1 MGP_LPJ_G0016732.1 mouse_genomes_project 1 180990668 181035357 - Mndal protein_coding retained_intron MGP_LPJ_T0000729.1 MGP_LPJ_G0000662.1 mouse_genomes_project 1 162679265 162684256 + TEC TEC MGP_LPJ_T0005922.1 MGP_LPJ_G0004965.1 mouse_genomes_project 1 136806201 136838046 + Gm26892 lincRNA lincRNA MGP_LPJ_T0012107.1 MGP_LPJ_G0010198.1 mouse_genomes_project 1 77864023 77864423 - processed_pseudogene processed_pseudogene MGP_LPJ_T0019415.1 MGP_LPJ_G0015869.1 mouse_genomes_project 1 38261177 38357089 + MGP_LPJ_P0019415 Npas2 protein_coding protein_coding MGP_LPJ_T0019416.1 MGP_LPJ_G0015869.1 mouse_genomes_project 1 38261658 38439109 + MGP_LPJ_P0019416 Npas2 protein_coding protein_coding MGP_LPJ_T0019417.1 MGP_LPJ_G0015869.1 mouse_genomes_project 1 38415340 38420120 + Npas2 protein_coding processed_transcript MGP_LPJ_T0021106.1 MGP_LPJ_G0016190.1 mouse_genomes_project 1 90512204 90703609 + MGP_LPJ_P0021106 Ugt1a9 protein_coding protein_coding MGP_LPJ_T0011959.1 MGP_LPJ_G0010050.1 mouse_genomes_project 1 31769817 31770568 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011960.1 MGP_LPJ_G0010051.1 mouse_genomes_project 1 31906858 31908551 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016933.1 MGP_LPJ_G0015011.1 mouse_genomes_project 1 43756467 43758106 + Gm28893 processed_transcript processed_transcript MGP_LPJ_T0000787.1 MGP_LPJ_G0000720.1 mouse_genomes_project 1 184396433 184397965 - TEC TEC MGP_LPJ_T0005685.1 MGP_LPJ_G0004784.1 mouse_genomes_project 1 19920998 19923679 + Gm26580 lincRNA lincRNA MGP_LPJ_T0000720.1 MGP_LPJ_G0000653.1 mouse_genomes_project 1 159392327 159393147 + TEC TEC MGP_LPJ_T0020345.1 MGP_LPJ_G0016049.1 mouse_genomes_project 1 74218962 74280199 - MGP_LPJ_P0020345 Ankar protein_coding protein_coding MGP_LPJ_T0011895.1 MGP_LPJ_G0009986.1 mouse_genomes_project 1 7271373 7271730 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023832.1 MGP_LPJ_G0016793.1 mouse_genomes_project 1 188636434 188640229 + MGP_LPJ_P0023832 Pycr2 protein_coding protein_coding MGP_LPJ_T0023833.1 MGP_LPJ_G0016793.1 mouse_genomes_project 1 188636450 188638761 + Pycr2 protein_coding retained_intron MGP_LPJ_T0023834.1 MGP_LPJ_G0016793.1 mouse_genomes_project 1 188636464 188640228 + Pycr2 protein_coding retained_intron MGP_LPJ_T0023835.1 MGP_LPJ_G0016793.1 mouse_genomes_project 1 188638056 188639044 + Pycr2 protein_coding retained_intron MGP_LPJ_T0000499.1 MGP_LPJ_G0000434.1 mouse_genomes_project 1 44879534 44886741 - TEC TEC MGP_LPJ_T0012136.1 MGP_LPJ_G0010227.1 mouse_genomes_project 1 91636595 91636838 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000540.1 MGP_LPJ_G0000475.1 mouse_genomes_project 1 68026155 68030857 - TEC TEC MGP_LPJ_T0021649.1 MGP_LPJ_G0016316.1 mouse_genomes_project 1 123634526 123744415 - MGP_LPJ_P0021649 Epb41l5 protein_coding protein_coding MGP_LPJ_T0021650.1 MGP_LPJ_G0016316.1 mouse_genomes_project 1 123637618 123744413 - MGP_LPJ_P0021650 Epb41l5 protein_coding protein_coding MGP_LPJ_T0021651.1 MGP_LPJ_G0016316.1 mouse_genomes_project 1 123643722 123689691 - Epb41l5 protein_coding retained_intron MGP_LPJ_T0021652.1 MGP_LPJ_G0016316.1 mouse_genomes_project 1 123667523 123669811 - Epb41l5 protein_coding retained_intron MGP_LPJ_T0021653.1 MGP_LPJ_G0016316.1 mouse_genomes_project 1 123680128 123744479 - MGP_LPJ_P0021653 Epb41l5 protein_coding protein_coding MGP_LPJ_T0021654.1 MGP_LPJ_G0016316.1 mouse_genomes_project 1 123684459 123744096 - MGP_LPJ_P0021654 Epb41l5 protein_coding protein_coding MGP_LPJ_T0021655.1 MGP_LPJ_G0016316.1 mouse_genomes_project 1 123684827 123688626 - Epb41l5 protein_coding retained_intron MGP_LPJ_T0021656.1 MGP_LPJ_G0016316.1 mouse_genomes_project 1 123709840 123727747 - Epb41l5 protein_coding retained_intron MGP_LPJ_T0021657.1 MGP_LPJ_G0016316.1 mouse_genomes_project 1 123715351 123744103 - MGP_LPJ_P0021657 Epb41l5 protein_coding protein_coding MGP_LPJ_T0101680.1 MGP_LPJ_G0039718.1 mouse_genomes_project 1 45446201 45448878 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0003003.1 MGP_LPJ_G0002819.1 mouse_genomes_project 1 197420875 197422341 + A430027H14Rik antisense antisense MGP_LPJ_T0003004.1 MGP_LPJ_G0002819.1 mouse_genomes_project 1 197421428 197422317 + A430027H14Rik antisense antisense MGP_LPJ_T0023992.1 MGP_LPJ_G0016829.1 mouse_genomes_project 1 193072132 193159763 + MGP_LPJ_P0023992 Rab3gap2 protein_coding protein_coding MGP_LPJ_T0023993.1 MGP_LPJ_G0016829.1 mouse_genomes_project 1 193072132 193162330 + MGP_LPJ_P0023993 Rab3gap2 protein_coding protein_coding MGP_LPJ_T0023994.1 MGP_LPJ_G0016829.1 mouse_genomes_project 1 193072193 193074453 + Rab3gap2 protein_coding retained_intron MGP_LPJ_T0023995.1 MGP_LPJ_G0016829.1 mouse_genomes_project 1 193137710 193162315 + Rab3gap2 protein_coding retained_intron MGP_LPJ_T0023996.1 MGP_LPJ_G0016829.1 mouse_genomes_project 1 193137873 193160302 + Rab3gap2 protein_coding retained_intron MGP_LPJ_T0023997.1 MGP_LPJ_G0016829.1 mouse_genomes_project 1 193153352 193157273 + Rab3gap2 protein_coding retained_intron MGP_LPJ_T0020298.1 MGP_LPJ_G0016039.1 mouse_genomes_project 1 72511738 72586408 - MGP_LPJ_P0020298 Bard1 protein_coding protein_coding MGP_LPJ_T0020515.1 MGP_LPJ_G0016085.1 mouse_genomes_project 1 76810288 76818638 - MGP_LPJ_P0020515 Slc23a3 protein_coding protein_coding MGP_LPJ_T0020516.1 MGP_LPJ_G0016085.1 mouse_genomes_project 1 76816460 76818294 - Slc23a3 protein_coding retained_intron MGP_LPJ_T0000700.1 MGP_LPJ_G0000633.1 mouse_genomes_project 1 146705991 146706498 + TEC TEC MGP_LPJ_T0099990.1 MGP_LPJ_G0038253.1 mouse_genomes_project 1 67497775 67497912 + Gm24729 snoRNA snoRNA MGP_LPJ_T0023248.1 MGP_LPJ_G0016644.1 mouse_genomes_project 1 177009471 177014939 + MGP_LPJ_P0023248 Sh2d1b2 protein_coding protein_coding MGP_LPJ_T0023305.1 MGP_LPJ_G0016661.1 mouse_genomes_project 1 178074587 178098570 - MGP_LPJ_P0023305 Pcp4l1 protein_coding protein_coding MGP_LPJ_T0005783.1 MGP_LPJ_G0004854.1 mouse_genomes_project 1 64300669 64306976 - Gm11608 lincRNA lincRNA MGP_LPJ_T0005784.1 MGP_LPJ_G0004854.1 mouse_genomes_project 1 64300669 64306981 - Gm11608 lincRNA lincRNA MGP_LPJ_T0002829.1 MGP_LPJ_G0002684.1 mouse_genomes_project 1 55199387 55260950 + 4930444A19Rik antisense antisense MGP_LPJ_T0002830.1 MGP_LPJ_G0002684.1 mouse_genomes_project 1 55208168 55293447 + 4930444A19Rik antisense antisense MGP_LPJ_T0098448.1 MGP_LPJ_G0036729.1 mouse_genomes_project 1 75988877 75991180 + Gm29358 sense_intronic sense_intronic MGP_LPJ_T0098449.1 MGP_LPJ_G0036729.1 mouse_genomes_project 1 75988915 75992142 + Gm29358 sense_intronic sense_intronic MGP_LPJ_T0098747.1 MGP_LPJ_G0037010.1 mouse_genomes_project 1 64334766 64334870 - Gm23448 snRNA snRNA MGP_LPJ_T0098739.1 MGP_LPJ_G0037002.1 mouse_genomes_project 1 34614867 34614972 + Gm25634 snRNA snRNA MGP_LPJ_T0022050.1 MGP_LPJ_G0016402.1 mouse_genomes_project 1 138154136 138173892 + MGP_LPJ_P0022050 protein_coding protein_coding MGP_LPJ_T0022051.1 MGP_LPJ_G0016402.1 mouse_genomes_project 1 138154136 138173926 + MGP_LPJ_P0022051 protein_coding protein_coding MGP_LPJ_T0022056.1 MGP_LPJ_G0016402.1 mouse_genomes_project 1 138168164 138173926 + MGP_LPJ_P0022056 protein_coding protein_coding MGP_LPJ_T0005696.1 MGP_LPJ_G0004794.1 mouse_genomes_project 1 31887778 31890480 - Gm37591 lincRNA lincRNA MGP_LPJ_T0012239.1 MGP_LPJ_G0010330.1 mouse_genomes_project 1 136190591 136190847 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000385.1 MGP_LPJ_G0000323.1 mouse_genomes_project 1 529814 532631 - TEC TEC MGP_LPJ_T0000602.1 MGP_LPJ_G0000537.1 mouse_genomes_project 1 94709367 94714941 + TEC TEC MGP_LPJ_T0000802.1 MGP_LPJ_G0000734.1 mouse_genomes_project 1 189147278 189148589 + TEC TEC MGP_LPJ_T0098780.1 MGP_LPJ_G0037043.1 mouse_genomes_project 1 135798587 135798681 - Gm25549 snRNA snRNA MGP_LPJ_T0099962.1 MGP_LPJ_G0038225.1 mouse_genomes_project 1 17332895 17332960 - Gm24633 snoRNA snoRNA MGP_LPJ_T0098734.1 MGP_LPJ_G0036997.1 mouse_genomes_project 1 31182519 31182582 - Gm24732 snRNA snRNA MGP_LPJ_T0011916.1 MGP_LPJ_G0010007.1 mouse_genomes_project 1 15752041 15755134 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006003.1 MGP_LPJ_G0005029.1 mouse_genomes_project 1 172591122 172641085 + Gm26665 lincRNA lincRNA MGP_LPJ_T0022621.1 MGP_LPJ_G0016520.1 mouse_genomes_project 1 159754568 159786345 - MGP_LPJ_P0022621 Rgsl1 protein_coding protein_coding MGP_LPJ_T0022622.1 MGP_LPJ_G0016520.1 mouse_genomes_project 1 159754573 159832170 - MGP_LPJ_P0022622 Rgsl1 protein_coding protein_coding MGP_LPJ_T0022623.1 MGP_LPJ_G0016520.1 mouse_genomes_project 1 159754579 159803609 - MGP_LPJ_P0022623 Rgsl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0022624.1 MGP_LPJ_G0016520.1 mouse_genomes_project 1 159756844 159764666 - Rgsl1 protein_coding processed_transcript MGP_LPJ_T0022625.1 MGP_LPJ_G0016520.1 mouse_genomes_project 1 159759073 159832162 - MGP_LPJ_P0022625 Rgsl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0022626.1 MGP_LPJ_G0016520.1 mouse_genomes_project 1 159766518 159800016 - Rgsl1 protein_coding retained_intron MGP_LPJ_T0022627.1 MGP_LPJ_G0016520.1 mouse_genomes_project 1 159777964 159792025 - Rgsl1 protein_coding processed_transcript MGP_LPJ_T0012248.1 MGP_LPJ_G0010339.1 mouse_genomes_project 1 141571036 141571318 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009549.1 MGP_LPJ_G0007667.1 mouse_genomes_project 1 139773931 139774023 + Gm22232 miRNA miRNA MGP_LPJ_T0021264.1 MGP_LPJ_G0016230.1 mouse_genomes_project 1 94662146 94882520 - MGP_LPJ_P0021264 Hdac4 protein_coding unknown_likely_coding MGP_LPJ_T0021265.1 MGP_LPJ_G0016230.1 mouse_genomes_project 1 94662146 94916041 - MGP_LPJ_P0021265 Hdac4 protein_coding protein_coding MGP_LPJ_T0021266.1 MGP_LPJ_G0016230.1 mouse_genomes_project 1 94666118 94882636 - MGP_LPJ_P0021266 Hdac4 protein_coding protein_coding MGP_LPJ_T0021267.1 MGP_LPJ_G0016230.1 mouse_genomes_project 1 94666319 94741190 - Hdac4 protein_coding processed_transcript MGP_LPJ_T0021268.1 MGP_LPJ_G0016230.1 mouse_genomes_project 1 94666564 94668223 - Hdac4 protein_coding retained_intron MGP_LPJ_T0021269.1 MGP_LPJ_G0016230.1 mouse_genomes_project 1 94688754 94708882 - MGP_LPJ_P0021269 Hdac4 protein_coding protein_coding MGP_LPJ_T0021270.1 MGP_LPJ_G0016230.1 mouse_genomes_project 1 94722427 94726963 - Hdac4 protein_coding retained_intron MGP_LPJ_T0021271.1 MGP_LPJ_G0016230.1 mouse_genomes_project 1 94738004 94741195 - Hdac4 protein_coding retained_intron MGP_LPJ_T0021272.1 MGP_LPJ_G0016230.1 mouse_genomes_project 1 94764392 94915997 - MGP_LPJ_P0021272 Hdac4 protein_coding protein_coding MGP_LPJ_T0021273.1 MGP_LPJ_G0016230.1 mouse_genomes_project 1 94764403 94845279 - Hdac4 protein_coding processed_transcript MGP_LPJ_T0021274.1 MGP_LPJ_G0016230.1 mouse_genomes_project 1 94764487 94845279 - Hdac4 protein_coding processed_transcript MGP_LPJ_T0019368.1 MGP_LPJ_G0015861.1 mouse_genomes_project 1 36992477 37004604 - MGP_LPJ_P0019368 Txndc9 protein_coding protein_coding MGP_LPJ_T0019369.1 MGP_LPJ_G0015861.1 mouse_genomes_project 1 36994682 37005182 - MGP_LPJ_P0019369 Txndc9 protein_coding protein_coding MGP_LPJ_T0019370.1 MGP_LPJ_G0015861.1 mouse_genomes_project 1 36994682 37004532 - MGP_LPJ_P0019370 Txndc9 protein_coding protein_coding MGP_LPJ_T0019371.1 MGP_LPJ_G0015861.1 mouse_genomes_project 1 36994684 37004513 - Txndc9 protein_coding retained_intron MGP_LPJ_T0019372.1 MGP_LPJ_G0015861.1 mouse_genomes_project 1 36994928 37003134 - MGP_LPJ_P0019372 Txndc9 protein_coding protein_coding MGP_LPJ_T0019373.1 MGP_LPJ_G0015861.1 mouse_genomes_project 1 36994931 37004905 - MGP_LPJ_P0019373 Txndc9 protein_coding protein_coding MGP_LPJ_T0019374.1 MGP_LPJ_G0015861.1 mouse_genomes_project 1 36997546 37003947 - MGP_LPJ_P0019374 Txndc9 protein_coding protein_coding MGP_LPJ_T0019375.1 MGP_LPJ_G0015861.1 mouse_genomes_project 1 37003203 37004551 - Txndc9 protein_coding retained_intron MGP_LPJ_T0020199.1 MGP_LPJ_G0016024.1 mouse_genomes_project 1 66282151 66305137 + Pikfyve protein_coding retained_intron MGP_LPJ_T0020200.1 MGP_LPJ_G0016024.1 mouse_genomes_project 1 66282157 66355071 + MGP_LPJ_P0020200 Pikfyve protein_coding nonsense_mediated_decay MGP_LPJ_T0020201.1 MGP_LPJ_G0016024.1 mouse_genomes_project 1 66282161 66326612 + Pikfyve protein_coding retained_intron MGP_LPJ_T0020202.1 MGP_LPJ_G0016024.1 mouse_genomes_project 1 66282162 66291918 + Pikfyve protein_coding retained_intron MGP_LPJ_T0020203.1 MGP_LPJ_G0016024.1 mouse_genomes_project 1 66282164 66305605 + Pikfyve protein_coding processed_transcript MGP_LPJ_T0020204.1 MGP_LPJ_G0016024.1 mouse_genomes_project 1 66282170 66390958 + MGP_LPJ_P0020204 Pikfyve protein_coding protein_coding MGP_LPJ_T0020205.1 MGP_LPJ_G0016024.1 mouse_genomes_project 1 66282172 66339827 + Pikfyve protein_coding retained_intron MGP_LPJ_T0020206.1 MGP_LPJ_G0016024.1 mouse_genomes_project 1 66282181 66291622 + MGP_LPJ_P0020206 Pikfyve protein_coding nonsense_mediated_decay MGP_LPJ_T0020207.1 MGP_LPJ_G0016024.1 mouse_genomes_project 1 66282218 66386275 + MGP_LPJ_P0020207 Pikfyve protein_coding protein_coding MGP_LPJ_T0020208.1 MGP_LPJ_G0016024.1 mouse_genomes_project 1 66296194 66315693 + Pikfyve protein_coding retained_intron MGP_LPJ_T0098098.1 MGP_LPJ_G0036379.1 mouse_genomes_project 1 172346450 172346568 - Gm24808 rRNA rRNA MGP_LPJ_T0002874.1 MGP_LPJ_G0002716.1 mouse_genomes_project 1 90276688 90277640 - Gm19582 antisense antisense MGP_LPJ_T0002977.1 MGP_LPJ_G0002796.1 mouse_genomes_project 1 179191684 179192684 + Gm37950 antisense antisense MGP_LPJ_T0000707.1 MGP_LPJ_G0000640.1 mouse_genomes_project 1 152761163 152762358 - TEC TEC MGP_LPJ_T0012365.1 MGP_LPJ_G0010456.1 mouse_genomes_project 1 199187047 199187252 - processed_pseudogene processed_pseudogene MGP_LPJ_T0022460.1 MGP_LPJ_G0016492.1 mouse_genomes_project 1 156002554 156020133 + MGP_LPJ_P0022460 Pdc protein_coding protein_coding MGP_LPJ_T0022461.1 MGP_LPJ_G0016492.1 mouse_genomes_project 1 156002554 156020132 + MGP_LPJ_P0022461 Pdc protein_coding protein_coding MGP_LPJ_T0022462.1 MGP_LPJ_G0016492.1 mouse_genomes_project 1 156002563 156019547 + MGP_LPJ_P0022462 Pdc protein_coding protein_coding MGP_LPJ_T0022463.1 MGP_LPJ_G0016492.1 mouse_genomes_project 1 156002566 156020130 + MGP_LPJ_P0022463 Pdc protein_coding protein_coding MGP_LPJ_T0012254.1 MGP_LPJ_G0010345.1 mouse_genomes_project 1 144058895 144059334 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100024.1 MGP_LPJ_G0038287.1 mouse_genomes_project 1 150685577 150685704 - Gm25460 snoRNA snoRNA MGP_LPJ_T0000680.1 MGP_LPJ_G0000614.1 mouse_genomes_project 1 142427522 142427931 - TEC TEC MGP_LPJ_T0020658.1 MGP_LPJ_G0016102.1 mouse_genomes_project 1 77134282 77141544 + MGP_LPJ_P0020658 Gmppa protein_coding protein_coding MGP_LPJ_T0020659.1 MGP_LPJ_G0016102.1 mouse_genomes_project 1 77134295 77141543 + MGP_LPJ_P0020659 Gmppa protein_coding protein_coding MGP_LPJ_T0020660.1 MGP_LPJ_G0016102.1 mouse_genomes_project 1 77134313 77137228 + MGP_LPJ_P0020660 Gmppa protein_coding protein_coding MGP_LPJ_T0020661.1 MGP_LPJ_G0016102.1 mouse_genomes_project 1 77134319 77138867 + MGP_LPJ_P0020661 Gmppa protein_coding protein_coding MGP_LPJ_T0020662.1 MGP_LPJ_G0016102.1 mouse_genomes_project 1 77134320 77139883 + MGP_LPJ_P0020662 Gmppa protein_coding protein_coding MGP_LPJ_T0020663.1 MGP_LPJ_G0016102.1 mouse_genomes_project 1 77134334 77139977 + MGP_LPJ_P0020663 Gmppa protein_coding protein_coding MGP_LPJ_T0020664.1 MGP_LPJ_G0016102.1 mouse_genomes_project 1 77134336 77137754 + MGP_LPJ_P0020664 Gmppa protein_coding protein_coding MGP_LPJ_T0020665.1 MGP_LPJ_G0016102.1 mouse_genomes_project 1 77134439 77139892 + MGP_LPJ_P0020665 Gmppa protein_coding protein_coding MGP_LPJ_T0020666.1 MGP_LPJ_G0016102.1 mouse_genomes_project 1 77134465 77136681 + MGP_LPJ_P0020666 Gmppa protein_coding protein_coding MGP_LPJ_T0020667.1 MGP_LPJ_G0016102.1 mouse_genomes_project 1 77135294 77140398 + MGP_LPJ_P0020667 Gmppa protein_coding nonsense_mediated_decay MGP_LPJ_T0020668.1 MGP_LPJ_G0016102.1 mouse_genomes_project 1 77139987 77141302 + Gmppa protein_coding retained_intron MGP_LPJ_T0020669.1 MGP_LPJ_G0016102.1 mouse_genomes_project 1 77140535 77141543 + Gmppa protein_coding retained_intron MGP_LPJ_T0020670.1 MGP_LPJ_G0016102.1 mouse_genomes_project 1 77140593 77141549 + Gmppa protein_coding retained_intron MGP_LPJ_T0021978.1 MGP_LPJ_G0016387.1 mouse_genomes_project 1 137006560 137007280 - MGP_LPJ_P0021978 Gm10188 protein_coding protein_coding MGP_LPJ_T0000421.1 MGP_LPJ_G0000359.1 mouse_genomes_project 1 11429043 11431292 - TEC TEC MGP_LPJ_T0000404.1 MGP_LPJ_G0000342.1 mouse_genomes_project 1 6709719 6713028 + TEC TEC MGP_LPJ_T0023326.1 MGP_LPJ_G0016665.1 mouse_genomes_project 1 178131447 178136091 - MGP_LPJ_P0023326 Fcer1g protein_coding protein_coding MGP_LPJ_T0023327.1 MGP_LPJ_G0016665.1 mouse_genomes_project 1 178131455 178136033 - MGP_LPJ_P0023327 Fcer1g protein_coding protein_coding MGP_LPJ_T0023328.1 MGP_LPJ_G0016665.1 mouse_genomes_project 1 178132920 178136065 - Fcer1g protein_coding retained_intron MGP_LPJ_T0020671.1 MGP_LPJ_G0016103.1 mouse_genomes_project 1 77148826 77179471 + MGP_LPJ_P0020671 Asic4 protein_coding protein_coding MGP_LPJ_T0020672.1 MGP_LPJ_G0016103.1 mouse_genomes_project 1 77149089 77179474 + MGP_LPJ_P0020672 Asic4 protein_coding protein_coding MGP_LPJ_T0005852.1 MGP_LPJ_G0004908.1 mouse_genomes_project 1 92879474 92884332 - Gm28721 lincRNA lincRNA MGP_LPJ_T0098726.1 MGP_LPJ_G0036989.1 mouse_genomes_project 1 8055683 8055790 - Gm25253 snRNA snRNA MGP_LPJ_T0098797.1 MGP_LPJ_G0037060.1 mouse_genomes_project 1 177608960 177609067 - Gm23523 snRNA snRNA MGP_LPJ_T0022872.1 MGP_LPJ_G0016563.1 mouse_genomes_project 1 167317627 167320831 + Serpinc1 protein_coding retained_intron MGP_LPJ_T0022873.1 MGP_LPJ_G0016563.1 mouse_genomes_project 1 167317648 167337534 + MGP_LPJ_P0022873 Serpinc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0022874.1 MGP_LPJ_G0016563.1 mouse_genomes_project 1 167317730 167328602 + MGP_LPJ_P0022874 Serpinc1 protein_coding protein_coding MGP_LPJ_T0022875.1 MGP_LPJ_G0016563.1 mouse_genomes_project 1 167323721 167337563 + MGP_LPJ_P0022875 Serpinc1 protein_coding protein_coding MGP_LPJ_T0022876.1 MGP_LPJ_G0016563.1 mouse_genomes_project 1 167326030 167328692 + Serpinc1 protein_coding retained_intron MGP_LPJ_T0022877.1 MGP_LPJ_G0016563.1 mouse_genomes_project 1 167326486 167342885 + MGP_LPJ_P0022877 Serpinc1 protein_coding protein_coding MGP_LPJ_T0022878.1 MGP_LPJ_G0016563.1 mouse_genomes_project 1 167328320 167342885 + MGP_LPJ_P0022878 Serpinc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0012170.1 MGP_LPJ_G0010261.1 mouse_genomes_project 1 108991098 108991715 + processed_pseudogene processed_pseudogene MGP_LPJ_T0023488.1 MGP_LPJ_G0016696.1 mouse_genomes_project 1 179146252 179156278 - MGP_LPJ_P0023488 Pea15a protein_coding protein_coding MGP_LPJ_T0023489.1 MGP_LPJ_G0016696.1 mouse_genomes_project 1 179146252 179156278 - MGP_LPJ_P0023489 Pea15a protein_coding protein_coding MGP_LPJ_T0023490.1 MGP_LPJ_G0016696.1 mouse_genomes_project 1 179147937 179149337 - Pea15a protein_coding processed_transcript MGP_LPJ_T0023491.1 MGP_LPJ_G0016696.1 mouse_genomes_project 1 179148682 179156171 - MGP_LPJ_P0023491 Pea15a protein_coding protein_coding MGP_LPJ_T0023492.1 MGP_LPJ_G0016696.1 mouse_genomes_project 1 179149296 179156278 - Pea15a protein_coding retained_intron MGP_LPJ_T0019724.1 MGP_LPJ_G0015931.1 mouse_genomes_project 1 53263366 53268225 + Ormdl1 protein_coding retained_intron MGP_LPJ_T0019725.1 MGP_LPJ_G0015931.1 mouse_genomes_project 1 53263366 53276758 + MGP_LPJ_P0019725 Ormdl1 protein_coding protein_coding MGP_LPJ_T0021403.1 MGP_LPJ_G0016260.1 mouse_genomes_project 1 96321364 96435476 + MGP_LPJ_P0021403 Farp2 protein_coding protein_coding MGP_LPJ_T0021404.1 MGP_LPJ_G0016260.1 mouse_genomes_project 1 96321397 96393940 + MGP_LPJ_P0021404 Farp2 protein_coding protein_coding MGP_LPJ_T0098791.1 MGP_LPJ_G0037054.1 mouse_genomes_project 1 156776261 156776368 - Gm22756 snRNA snRNA MGP_LPJ_T0000600.1 MGP_LPJ_G0000535.1 mouse_genomes_project 1 93552830 93553664 - TEC TEC MGP_LPJ_T0021543.1 MGP_LPJ_G0016292.1 mouse_genomes_project 1 110182863 110217209 - MGP_LPJ_P0021543 Vps4b protein_coding protein_coding MGP_LPJ_T0021544.1 MGP_LPJ_G0016292.1 mouse_genomes_project 1 110188222 110217270 - MGP_LPJ_P0021544 Vps4b protein_coding protein_coding MGP_LPJ_T0021545.1 MGP_LPJ_G0016292.1 mouse_genomes_project 1 110196090 110201585 - Vps4b protein_coding retained_intron MGP_LPJ_T0021546.1 MGP_LPJ_G0016292.1 mouse_genomes_project 1 110198233 110199415 - Vps4b protein_coding retained_intron MGP_LPJ_T0021547.1 MGP_LPJ_G0016292.1 mouse_genomes_project 1 110204596 110210406 - Vps4b protein_coding processed_transcript MGP_LPJ_T0021548.1 MGP_LPJ_G0016292.1 mouse_genomes_project 1 110211579 110217119 - Vps4b protein_coding retained_intron MGP_LPJ_T0020456.1 MGP_LPJ_G0016071.1 mouse_genomes_project 1 76304453 76308289 + MGP_LPJ_P0020456 Bcs1l protein_coding protein_coding MGP_LPJ_T0020457.1 MGP_LPJ_G0016071.1 mouse_genomes_project 1 76304464 76308604 + MGP_LPJ_P0020457 Bcs1l protein_coding protein_coding MGP_LPJ_T0020458.1 MGP_LPJ_G0016071.1 mouse_genomes_project 1 76304538 76308354 + MGP_LPJ_P0020458 Bcs1l protein_coding protein_coding MGP_LPJ_T0020459.1 MGP_LPJ_G0016071.1 mouse_genomes_project 1 76306430 76307073 + Bcs1l protein_coding retained_intron MGP_LPJ_T0022971.1 MGP_LPJ_G0016581.1 mouse_genomes_project 1 169141805 169212747 - MGP_LPJ_P0022971 Prrc2c protein_coding protein_coding MGP_LPJ_T0022972.1 MGP_LPJ_G0016581.1 mouse_genomes_project 1 169141807 169212778 - MGP_LPJ_P0022972 Prrc2c protein_coding protein_coding MGP_LPJ_T0022973.1 MGP_LPJ_G0016581.1 mouse_genomes_project 1 169142865 169176978 - MGP_LPJ_P0022973 Prrc2c protein_coding protein_coding MGP_LPJ_T0022974.1 MGP_LPJ_G0016581.1 mouse_genomes_project 1 169142868 169177404 - MGP_LPJ_P0022974 Prrc2c protein_coding protein_coding MGP_LPJ_T0022975.1 MGP_LPJ_G0016581.1 mouse_genomes_project 1 169143656 169212703 - MGP_LPJ_P0022975 Prrc2c protein_coding protein_coding MGP_LPJ_T0022976.1 MGP_LPJ_G0016581.1 mouse_genomes_project 1 169145823 169212772 - MGP_LPJ_P0022976 Prrc2c protein_coding protein_coding MGP_LPJ_T0022977.1 MGP_LPJ_G0016581.1 mouse_genomes_project 1 169156085 169160403 - Prrc2c protein_coding retained_intron MGP_LPJ_T0022978.1 MGP_LPJ_G0016581.1 mouse_genomes_project 1 169182579 169212626 - MGP_LPJ_P0022978 Prrc2c protein_coding protein_coding MGP_LPJ_T0022979.1 MGP_LPJ_G0016581.1 mouse_genomes_project 1 169185014 169186229 - Prrc2c protein_coding retained_intron MGP_LPJ_T0022980.1 MGP_LPJ_G0016581.1 mouse_genomes_project 1 169192112 169212719 - Prrc2c protein_coding retained_intron MGP_LPJ_T0022981.1 MGP_LPJ_G0016581.1 mouse_genomes_project 1 169192765 169212572 - MGP_LPJ_P0022981 Prrc2c protein_coding protein_coding MGP_LPJ_T0022982.1 MGP_LPJ_G0016581.1 mouse_genomes_project 1 169195125 169197089 - Prrc2c protein_coding retained_intron MGP_LPJ_T0022983.1 MGP_LPJ_G0016581.1 mouse_genomes_project 1 169200838 169202943 - Prrc2c protein_coding retained_intron MGP_LPJ_T0022984.1 MGP_LPJ_G0016581.1 mouse_genomes_project 1 169202478 169212709 - Prrc2c protein_coding processed_transcript MGP_LPJ_T0000520.1 MGP_LPJ_G0000455.1 mouse_genomes_project 1 61297982 61299039 + TEC TEC MGP_LPJ_T0005831.1 MGP_LPJ_G0004890.1 mouse_genomes_project 1 82416904 82449891 + 1700016L21Rik lincRNA lincRNA MGP_LPJ_T0005832.1 MGP_LPJ_G0004890.1 mouse_genomes_project 1 82416912 82454098 + 1700016L21Rik lincRNA lincRNA MGP_LPJ_T0000682.1 MGP_LPJ_G0000616.1 mouse_genomes_project 1 142908352 142908647 + TEC TEC MGP_LPJ_T0021989.1 MGP_LPJ_G0016391.1 mouse_genomes_project 1 137205690 137259267 + MGP_LPJ_P0021989 Dstyk protein_coding protein_coding MGP_LPJ_T0021990.1 MGP_LPJ_G0016391.1 mouse_genomes_project 1 137205739 137255702 + MGP_LPJ_P0021990 Dstyk protein_coding protein_coding MGP_LPJ_T0021991.1 MGP_LPJ_G0016391.1 mouse_genomes_project 1 137206512 137222052 + Dstyk protein_coding processed_transcript MGP_LPJ_T0021992.1 MGP_LPJ_G0016391.1 mouse_genomes_project 1 137238173 137240381 + MGP_LPJ_P0021992 Dstyk protein_coding protein_coding MGP_LPJ_T0021993.1 MGP_LPJ_G0016391.1 mouse_genomes_project 1 137243348 137246413 + Dstyk protein_coding retained_intron MGP_LPJ_T0021994.1 MGP_LPJ_G0016391.1 mouse_genomes_project 1 137254018 137254966 + Dstyk protein_coding retained_intron MGP_LPJ_T0024142.1 MGP_LPJ_G0016856.1 mouse_genomes_project 1 199368336 199370570 - MGP_LPJ_P0024142 Fam71a protein_coding protein_coding MGP_LPJ_T0098807.1 MGP_LPJ_G0037070.1 mouse_genomes_project 1 185965393 185965499 + Gm24919 snRNA snRNA MGP_LPJ_T0018758.1 MGP_LPJ_G0015743.1 mouse_genomes_project 1 7175925 7208267 - MGP_LPJ_P0018758 Vcpip1 protein_coding protein_coding MGP_LPJ_T0098456.1 MGP_LPJ_G0036736.1 mouse_genomes_project 1 143041832 143043076 + Gm26930 sense_intronic sense_intronic MGP_LPJ_T0002986.1 MGP_LPJ_G0002804.1 mouse_genomes_project 1 187933989 187955118 + Gm31728 antisense antisense MGP_LPJ_T0012342.1 MGP_LPJ_G0010433.1 mouse_genomes_project 1 185819470 185820278 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098392.1 MGP_LPJ_G0036673.1 mouse_genomes_project 1 165592525 165592665 + Scarna3a scaRNA scaRNA MGP_LPJ_T0000447.1 MGP_LPJ_G0000383.1 mouse_genomes_project 1 23706384 23709222 - TEC TEC MGP_LPJ_T0005758.1 MGP_LPJ_G0004835.1 mouse_genomes_project 1 56617220 56618446 + 1700003I22Rik lincRNA lincRNA MGP_LPJ_T0005759.1 MGP_LPJ_G0004835.1 mouse_genomes_project 1 56617265 56618380 + 1700003I22Rik lincRNA lincRNA MGP_LPJ_T0012041.1 MGP_LPJ_G0010132.1 mouse_genomes_project 1 55664061 55664769 - processed_pseudogene processed_pseudogene MGP_LPJ_T0024056.1 MGP_LPJ_G0016842.1 mouse_genomes_project 1 197027423 197067987 - MGP_LPJ_P0024056 Kctd3 protein_coding nonsense_mediated_decay MGP_LPJ_T0024057.1 MGP_LPJ_G0016842.1 mouse_genomes_project 1 197027423 197067999 - MGP_LPJ_P0024057 Kctd3 protein_coding protein_coding MGP_LPJ_T0024058.1 MGP_LPJ_G0016842.1 mouse_genomes_project 1 197028579 197030907 - Kctd3 protein_coding retained_intron MGP_LPJ_T0024059.1 MGP_LPJ_G0016842.1 mouse_genomes_project 1 197028692 197030525 - Kctd3 protein_coding retained_intron MGP_LPJ_T0024060.1 MGP_LPJ_G0016842.1 mouse_genomes_project 1 197028804 197036930 - MGP_LPJ_P0024060 Kctd3 protein_coding protein_coding MGP_LPJ_T0024061.1 MGP_LPJ_G0016842.1 mouse_genomes_project 1 197028847 197030024 - Kctd3 protein_coding retained_intron MGP_LPJ_T0024062.1 MGP_LPJ_G0016842.1 mouse_genomes_project 1 197030085 197034943 - Kctd3 protein_coding processed_transcript MGP_LPJ_T0024063.1 MGP_LPJ_G0016842.1 mouse_genomes_project 1 197036880 197040140 - Kctd3 protein_coding retained_intron MGP_LPJ_T0024064.1 MGP_LPJ_G0016842.1 mouse_genomes_project 1 197039130 197068000 - Kctd3 protein_coding retained_intron MGP_LPJ_T0024065.1 MGP_LPJ_G0016842.1 mouse_genomes_project 1 197053371 197057876 - Kctd3 protein_coding retained_intron MGP_LPJ_T0016950.1 MGP_LPJ_G0015019.1 mouse_genomes_project 1 88717895 88727883 + C130036L24Rik processed_transcript retained_intron MGP_LPJ_T0016951.1 MGP_LPJ_G0015019.1 mouse_genomes_project 1 88717905 88733635 + C130036L24Rik processed_transcript processed_transcript MGP_LPJ_T0016952.1 MGP_LPJ_G0015019.1 mouse_genomes_project 1 88717909 88721099 + C130036L24Rik processed_transcript retained_intron MGP_LPJ_T0011872.1 MGP_LPJ_G0009963.1 mouse_genomes_project 1 3281603 3282686 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002791.1 MGP_LPJ_G0002652.1 mouse_genomes_project 1 15494375 15569548 - Gm28153 antisense antisense MGP_LPJ_T0023904.1 MGP_LPJ_G0016808.1 mouse_genomes_project 1 190083967 190090996 - MGP_LPJ_P0023904 Degs1 protein_coding protein_coding MGP_LPJ_T0023905.1 MGP_LPJ_G0016808.1 mouse_genomes_project 1 190086688 190090996 - Degs1 protein_coding retained_intron MGP_LPJ_T0023906.1 MGP_LPJ_G0016808.1 mouse_genomes_project 1 190087195 190090416 - MGP_LPJ_P0023906 Degs1 protein_coding protein_coding MGP_LPJ_T0101704.1 MGP_LPJ_G0039742.1 mouse_genomes_project 1 100191110 100372833 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0000639.1 MGP_LPJ_G0000574.1 mouse_genomes_project 1 128748239 128751903 - TEC TEC MGP_LPJ_T0101690.1 MGP_LPJ_G0039728.1 mouse_genomes_project 1 80293733 80293994 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0020180.1 MGP_LPJ_G0016017.1 mouse_genomes_project 1 66153880 66156149 - MGP_LPJ_P0020180 Crygd protein_coding protein_coding MGP_LPJ_T0020181.1 MGP_LPJ_G0016017.1 mouse_genomes_project 1 66154353 66155998 - MGP_LPJ_P0020181 Crygd protein_coding protein_coding MGP_LPJ_T0020182.1 MGP_LPJ_G0016017.1 mouse_genomes_project 1 66154741 66156149 - Crygd protein_coding retained_intron MGP_LPJ_T0009521.1 MGP_LPJ_G0007639.1 mouse_genomes_project 1 78272115 78272199 + Mir6343 miRNA miRNA MGP_LPJ_T0011863.1 MGP_LPJ_G0009954.1 mouse_genomes_project 1 1817583 1818519 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012240.1 MGP_LPJ_G0010331.1 mouse_genomes_project 1 136379377 136379773 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012213.1 MGP_LPJ_G0010304.1 mouse_genomes_project 1 123989556 123989786 + processed_pseudogene processed_pseudogene MGP_LPJ_T0022506.1 MGP_LPJ_G0016498.1 mouse_genomes_project 1 157143538 157208524 - MGP_LPJ_P0022506 Swt1 protein_coding protein_coding MGP_LPJ_T0022507.1 MGP_LPJ_G0016498.1 mouse_genomes_project 1 157144203 157208505 - MGP_LPJ_P0022507 Swt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0022508.1 MGP_LPJ_G0016498.1 mouse_genomes_project 1 157146226 157148157 - Swt1 protein_coding retained_intron MGP_LPJ_T0022509.1 MGP_LPJ_G0016498.1 mouse_genomes_project 1 157153252 157159509 - Swt1 protein_coding retained_intron MGP_LPJ_T0022510.1 MGP_LPJ_G0016498.1 mouse_genomes_project 1 157166456 157179196 - MGP_LPJ_P0022510 Swt1 protein_coding protein_coding MGP_LPJ_T0022511.1 MGP_LPJ_G0016498.1 mouse_genomes_project 1 157177302 157203579 - MGP_LPJ_P0022511 Swt1 protein_coding protein_coding MGP_LPJ_T0022512.1 MGP_LPJ_G0016498.1 mouse_genomes_project 1 157177937 157181050 - Swt1 protein_coding retained_intron MGP_LPJ_T0022513.1 MGP_LPJ_G0016498.1 mouse_genomes_project 1 157188029 157189854 - Swt1 protein_coding retained_intron MGP_LPJ_T0022514.1 MGP_LPJ_G0016498.1 mouse_genomes_project 1 157195300 157203364 - Swt1 protein_coding retained_intron MGP_LPJ_T0022515.1 MGP_LPJ_G0016498.1 mouse_genomes_project 1 157207088 157208524 - Swt1 protein_coding retained_intron MGP_LPJ_T0019089.1 MGP_LPJ_G0015811.1 mouse_genomes_project 1 29644971 29733372 - MGP_LPJ_P0019089 4931428L18Rik protein_coding protein_coding MGP_LPJ_T0019090.1 MGP_LPJ_G0015811.1 mouse_genomes_project 1 29650843 29733432 - MGP_LPJ_P0019090 4931428L18Rik protein_coding protein_coding MGP_LPJ_T0019091.1 MGP_LPJ_G0015811.1 mouse_genomes_project 1 29651455 29733403 - MGP_LPJ_P0019091 4931428L18Rik protein_coding protein_coding MGP_LPJ_T0019094.1 MGP_LPJ_G0015811.1 mouse_genomes_project 1 29715392 29733459 - MGP_LPJ_P0019094 4931428L18Rik protein_coding protein_coding MGP_LPJ_T0021945.1 MGP_LPJ_G0016383.1 mouse_genomes_project 1 136776703 136795886 + MGP_LPJ_P0021945 Elk4 protein_coding protein_coding MGP_LPJ_T0021946.1 MGP_LPJ_G0016383.1 mouse_genomes_project 1 136776972 136793109 + MGP_LPJ_P0021946 Elk4 protein_coding protein_coding MGP_LPJ_T0021947.1 MGP_LPJ_G0016383.1 mouse_genomes_project 1 136777195 136784105 + Elk4 protein_coding processed_transcript MGP_LPJ_T0021948.1 MGP_LPJ_G0016383.1 mouse_genomes_project 1 136777205 136783963 + Elk4 protein_coding processed_transcript MGP_LPJ_T0021949.1 MGP_LPJ_G0016383.1 mouse_genomes_project 1 136777393 136787761 + MGP_LPJ_P0021949 Elk4 protein_coding protein_coding MGP_LPJ_T0021950.1 MGP_LPJ_G0016383.1 mouse_genomes_project 1 136787263 136802007 + MGP_LPJ_P0021950 Elk4 protein_coding nonsense_mediated_decay MGP_LPJ_T0021951.1 MGP_LPJ_G0016383.1 mouse_genomes_project 1 136787898 136801089 + Elk4 protein_coding processed_transcript MGP_LPJ_T0005934.1 MGP_LPJ_G0004977.1 mouse_genomes_project 1 141589858 141606145 + Gm37799 lincRNA lincRNA MGP_LPJ_T0101734.1 MGP_LPJ_G0039772.1 mouse_genomes_project 1 181294199 181295142 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0021286.1 MGP_LPJ_G0016234.1 mouse_genomes_project 1 95258193 95280636 - MGP_LPJ_P0021286 Olfr1415 protein_coding protein_coding MGP_LPJ_T0021287.1 MGP_LPJ_G0016234.1 mouse_genomes_project 1 95258193 95264756 - MGP_LPJ_P0021287 Olfr1415 protein_coding protein_coding MGP_LPJ_T0021288.1 MGP_LPJ_G0016234.1 mouse_genomes_project 1 95264335 95280613 - MGP_LPJ_P0021288 Olfr1415 protein_coding protein_coding MGP_LPJ_T0101683.1 MGP_LPJ_G0039721.1 mouse_genomes_project 1 59824817 59833601 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0006012.1 MGP_LPJ_G0005037.1 mouse_genomes_project 1 176923045 176925520 - Gm37502 lincRNA lincRNA MGP_LPJ_T0020705.1 MGP_LPJ_G0016109.1 mouse_genomes_project 1 77257806 77273659 + MGP_LPJ_P0020705 Slc4a3 protein_coding protein_coding MGP_LPJ_T0020706.1 MGP_LPJ_G0016109.1 mouse_genomes_project 1 77257835 77259047 + Slc4a3 protein_coding retained_intron MGP_LPJ_T0020707.1 MGP_LPJ_G0016109.1 mouse_genomes_project 1 77258001 77259578 + MGP_LPJ_P0020707 Slc4a3 protein_coding protein_coding MGP_LPJ_T0020708.1 MGP_LPJ_G0016109.1 mouse_genomes_project 1 77258035 77270394 + MGP_LPJ_P0020708 Slc4a3 protein_coding nonsense_mediated_decay MGP_LPJ_T0020709.1 MGP_LPJ_G0016109.1 mouse_genomes_project 1 77258066 77259284 + Slc4a3 protein_coding retained_intron MGP_LPJ_T0020710.1 MGP_LPJ_G0016109.1 mouse_genomes_project 1 77258072 77259551 + MGP_LPJ_P0020710 Slc4a3 protein_coding protein_coding MGP_LPJ_T0020711.1 MGP_LPJ_G0016109.1 mouse_genomes_project 1 77258183 77272386 + Slc4a3 protein_coding retained_intron MGP_LPJ_T0020712.1 MGP_LPJ_G0016109.1 mouse_genomes_project 1 77258195 77259074 + Slc4a3 protein_coding retained_intron MGP_LPJ_T0020713.1 MGP_LPJ_G0016109.1 mouse_genomes_project 1 77261138 77262922 + MGP_LPJ_P0020713 Slc4a3 protein_coding protein_coding MGP_LPJ_T0020714.1 MGP_LPJ_G0016109.1 mouse_genomes_project 1 77261307 77262669 + Slc4a3 protein_coding retained_intron MGP_LPJ_T0020715.1 MGP_LPJ_G0016109.1 mouse_genomes_project 1 77262134 77266678 + MGP_LPJ_P0020715 Slc4a3 protein_coding nonsense_mediated_decay MGP_LPJ_T0020716.1 MGP_LPJ_G0016109.1 mouse_genomes_project 1 77263248 77265272 + MGP_LPJ_P0020716 Slc4a3 protein_coding nonsense_mediated_decay MGP_LPJ_T0012137.1 MGP_LPJ_G0010228.1 mouse_genomes_project 1 91833550 91834350 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009526.1 MGP_LPJ_G0007644.1 mouse_genomes_project 1 86790334 86790411 + Mir5126 miRNA miRNA MGP_LPJ_T0011277.1 MGP_LPJ_G0009395.1 mouse_genomes_project 1 198640494 198640807 - Gm23153 misc_RNA misc_RNA MGP_LPJ_T0005859.1 MGP_LPJ_G0004915.1 mouse_genomes_project 1 94193488 94195239 + Gm28382 lincRNA lincRNA MGP_LPJ_T0021481.1 MGP_LPJ_G0016280.1 mouse_genomes_project 1 100860064 100910908 - MGP_LPJ_P0021481 Pam protein_coding protein_coding MGP_LPJ_T0021482.1 MGP_LPJ_G0016280.1 mouse_genomes_project 1 100890955 101169954 - MGP_LPJ_P0021482 Pam protein_coding protein_coding MGP_LPJ_T0021483.1 MGP_LPJ_G0016280.1 mouse_genomes_project 1 100890956 101169965 - MGP_LPJ_P0021483 Pam protein_coding protein_coding MGP_LPJ_T0021484.1 MGP_LPJ_G0016280.1 mouse_genomes_project 1 100890961 101044930 - MGP_LPJ_P0021484 Pam protein_coding protein_coding MGP_LPJ_T0021485.1 MGP_LPJ_G0016280.1 mouse_genomes_project 1 100891551 100910486 - MGP_LPJ_P0021485 Pam protein_coding protein_coding MGP_LPJ_T0021486.1 MGP_LPJ_G0016280.1 mouse_genomes_project 1 100891811 100904744 - Pam protein_coding retained_intron MGP_LPJ_T0021487.1 MGP_LPJ_G0016280.1 mouse_genomes_project 1 100895755 100910978 - Pam protein_coding retained_intron MGP_LPJ_T0021488.1 MGP_LPJ_G0016280.1 mouse_genomes_project 1 100907628 100910488 - Pam protein_coding retained_intron MGP_LPJ_T0021489.1 MGP_LPJ_G0016280.1 mouse_genomes_project 1 100923941 100935481 - Pam protein_coding retained_intron MGP_LPJ_T0021490.1 MGP_LPJ_G0016280.1 mouse_genomes_project 1 100925650 100960076 - MGP_LPJ_P0021490 Pam protein_coding protein_coding MGP_LPJ_T0021491.1 MGP_LPJ_G0016280.1 mouse_genomes_project 1 100999462 101044743 - Pam protein_coding retained_intron MGP_LPJ_T0021492.1 MGP_LPJ_G0016280.1 mouse_genomes_project 1 101024113 101044919 - Pam protein_coding processed_transcript MGP_LPJ_T0021493.1 MGP_LPJ_G0016280.1 mouse_genomes_project 1 101128946 101132840 - Pam protein_coding retained_intron MGP_LPJ_T0021494.1 MGP_LPJ_G0016280.1 mouse_genomes_project 1 101132929 101169979 - Pam protein_coding processed_transcript MGP_LPJ_T0000780.1 MGP_LPJ_G0000713.1 mouse_genomes_project 1 183333578 183335222 - TEC TEC MGP_LPJ_T0012353.1 MGP_LPJ_G0010444.1 mouse_genomes_project 1 190212599 190213592 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002998.1 MGP_LPJ_G0002814.1 mouse_genomes_project 1 194944985 194948068 - Gm37912 antisense antisense MGP_LPJ_T0100013.1 MGP_LPJ_G0038276.1 mouse_genomes_project 1 126807946 126808090 + Gm25771 snoRNA snoRNA MGP_LPJ_T0020856.1 MGP_LPJ_G0016142.1 mouse_genomes_project 1 86145279 86380758 - MGP_LPJ_P0020856 Pid1 protein_coding protein_coding MGP_LPJ_T0020857.1 MGP_LPJ_G0016142.1 mouse_genomes_project 1 86146214 86434157 - MGP_LPJ_P0020857 Pid1 protein_coding protein_coding MGP_LPJ_T0020858.1 MGP_LPJ_G0016142.1 mouse_genomes_project 1 86146909 86167492 - Pid1 protein_coding processed_transcript MGP_LPJ_T0020859.1 MGP_LPJ_G0016142.1 mouse_genomes_project 1 86193953 86380536 - MGP_LPJ_P0020859 Pid1 protein_coding protein_coding MGP_LPJ_T0020860.1 MGP_LPJ_G0016142.1 mouse_genomes_project 1 86223337 86460302 - MGP_LPJ_P0020860 Pid1 protein_coding protein_coding MGP_LPJ_T0020861.1 MGP_LPJ_G0016142.1 mouse_genomes_project 1 86230875 86440761 - MGP_LPJ_P0020861 Pid1 protein_coding protein_coding MGP_LPJ_T0020862.1 MGP_LPJ_G0016142.1 mouse_genomes_project 1 86267020 86380724 - MGP_LPJ_P0020862 Pid1 protein_coding protein_coding MGP_LPJ_T0020863.1 MGP_LPJ_G0016142.1 mouse_genomes_project 1 86379305 86380736 - Pid1 protein_coding retained_intron MGP_LPJ_T0011961.1 MGP_LPJ_G0010052.1 mouse_genomes_project 1 31982061 31982974 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012377.1 MGP_LPJ_G0010468.1 mouse_genomes_project 1 203140967 203141325 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012140.1 MGP_LPJ_G0010231.1 mouse_genomes_project 1 94185684 94185877 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012163.1 MGP_LPJ_G0010254.1 mouse_genomes_project 1 105677832 105678099 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009527.1 MGP_LPJ_G0007645.1 mouse_genomes_project 1 88065686 88065813 + Mir8096 miRNA miRNA MGP_LPJ_T0000533.1 MGP_LPJ_G0000468.1 mouse_genomes_project 1 65819324 65824954 + TEC TEC MGP_LPJ_T0020673.1 MGP_LPJ_G0016104.1 mouse_genomes_project 1 77179699 77184402 - MGP_LPJ_P0020673 Chpf protein_coding protein_coding MGP_LPJ_T0020674.1 MGP_LPJ_G0016104.1 mouse_genomes_project 1 77179705 77184438 - MGP_LPJ_P0020674 Chpf protein_coding protein_coding MGP_LPJ_T0020675.1 MGP_LPJ_G0016104.1 mouse_genomes_project 1 77179706 77183879 - Chpf protein_coding retained_intron MGP_LPJ_T0020676.1 MGP_LPJ_G0016104.1 mouse_genomes_project 1 77179706 77184250 - MGP_LPJ_P0020676 Chpf protein_coding nonsense_mediated_decay MGP_LPJ_T0020677.1 MGP_LPJ_G0016104.1 mouse_genomes_project 1 77182639 77184245 - MGP_LPJ_P0020677 Chpf protein_coding nonsense_mediated_decay MGP_LPJ_T0023261.1 MGP_LPJ_G0016650.1 mouse_genomes_project 1 177552130 177733354 - MGP_LPJ_P0023261 Atf6 protein_coding protein_coding MGP_LPJ_T0023262.1 MGP_LPJ_G0016650.1 mouse_genomes_project 1 177649466 177651563 - Atf6 protein_coding retained_intron MGP_LPJ_T0011899.1 MGP_LPJ_G0009990.1 mouse_genomes_project 1 8385667 8386437 + processed_pseudogene processed_pseudogene MGP_LPJ_T0022435.1 MGP_LPJ_G0016486.1 mouse_genomes_project 1 149625904 149632850 - MGP_LPJ_P0022435 Rgs1 protein_coding protein_coding MGP_LPJ_T0022436.1 MGP_LPJ_G0016486.1 mouse_genomes_project 1 149626821 149632664 - Rgs1 protein_coding retained_intron MGP_LPJ_T0022437.1 MGP_LPJ_G0016486.1 mouse_genomes_project 1 149627580 149632668 - MGP_LPJ_P0022437 Rgs1 protein_coding nonsense_mediated_decay MGP_LPJ_T0022438.1 MGP_LPJ_G0016486.1 mouse_genomes_project 1 149628203 149632668 - MGP_LPJ_P0022438 Rgs1 protein_coding nonsense_mediated_decay MGP_LPJ_T0022439.1 MGP_LPJ_G0016486.1 mouse_genomes_project 1 149628281 149632636 - MGP_LPJ_P0022439 Rgs1 protein_coding nonsense_mediated_decay MGP_LPJ_T0022440.1 MGP_LPJ_G0016486.1 mouse_genomes_project 1 149628281 149632666 - MGP_LPJ_P0022440 Rgs1 protein_coding nonsense_mediated_decay MGP_LPJ_T0022441.1 MGP_LPJ_G0016486.1 mouse_genomes_project 1 149629071 149632667 - MGP_LPJ_P0022441 Rgs1 protein_coding protein_coding MGP_LPJ_T0022442.1 MGP_LPJ_G0016486.1 mouse_genomes_project 1 149631400 149632666 - Rgs1 protein_coding retained_intron MGP_LPJ_T0022443.1 MGP_LPJ_G0016486.1 mouse_genomes_project 1 149631403 149632669 - Rgs1 protein_coding retained_intron MGP_LPJ_T0012229.1 MGP_LPJ_G0010320.1 mouse_genomes_project 1 129002658 129003049 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009570.1 MGP_LPJ_G0007688.1 mouse_genomes_project 1 184109416 184109515 - Mir350 miRNA miRNA MGP_LPJ_T0009580.1 MGP_LPJ_G0007698.1 mouse_genomes_project 1 201791721 201791789 - Mir205 miRNA miRNA MGP_LPJ_T0000576.1 MGP_LPJ_G0000511.1 mouse_genomes_project 1 86242129 86243849 - TEC TEC MGP_LPJ_T0020942.1 MGP_LPJ_G0016159.1 mouse_genomes_project 1 88478009 88509104 + MGP_LPJ_P0020942 protein_coding nonsense_mediated_decay MGP_LPJ_T0005861.1 MGP_LPJ_G0004917.1 mouse_genomes_project 1 94722427 94726965 + Gm26720 lincRNA lincRNA MGP_LPJ_T0019222.1 MGP_LPJ_G0015835.1 mouse_genomes_project 1 35231001 35264201 - MGP_LPJ_P0019222 Kansl3 protein_coding protein_coding MGP_LPJ_T0019223.1 MGP_LPJ_G0015835.1 mouse_genomes_project 1 35231001 35264177 - MGP_LPJ_P0019223 Kansl3 protein_coding protein_coding MGP_LPJ_T0019224.1 MGP_LPJ_G0015835.1 mouse_genomes_project 1 35232844 35264191 - MGP_LPJ_P0019224 Kansl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0019225.1 MGP_LPJ_G0015835.1 mouse_genomes_project 1 35232844 35263034 - MGP_LPJ_P0019225 Kansl3 protein_coding protein_coding MGP_LPJ_T0019226.1 MGP_LPJ_G0015835.1 mouse_genomes_project 1 35249760 35263061 - MGP_LPJ_P0019226 Kansl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0019227.1 MGP_LPJ_G0015835.1 mouse_genomes_project 1 35253148 35264175 - MGP_LPJ_P0019227 Kansl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0019228.1 MGP_LPJ_G0015835.1 mouse_genomes_project 1 35260647 35263061 - MGP_LPJ_P0019228 Kansl3 protein_coding protein_coding MGP_LPJ_T0019229.1 MGP_LPJ_G0015835.1 mouse_genomes_project 1 35260930 35264177 - Kansl3 protein_coding retained_intron MGP_LPJ_T0019230.1 MGP_LPJ_G0015835.1 mouse_genomes_project 1 35262985 35264122 - MGP_LPJ_P0019230 Kansl3 protein_coding protein_coding MGP_LPJ_T0098455.1 MGP_LPJ_G0036735.1 mouse_genomes_project 1 140412368 140416933 - Gm28277 sense_intronic sense_intronic MGP_LPJ_T0012005.1 MGP_LPJ_G0010096.1 mouse_genomes_project 1 44913136 44914117 - processed_pseudogene processed_pseudogene MGP_LPJ_T0021855.1 MGP_LPJ_G0016359.1 mouse_genomes_project 1 135443669 135456267 + MGP_LPJ_P0021855 AA986860 protein_coding protein_coding MGP_LPJ_T0021856.1 MGP_LPJ_G0016359.1 mouse_genomes_project 1 135443803 135454108 + AA986860 protein_coding processed_transcript MGP_LPJ_T0021857.1 MGP_LPJ_G0016359.1 mouse_genomes_project 1 135451916 135456266 + AA986860 protein_coding retained_intron MGP_LPJ_T0101731.1 MGP_LPJ_G0039769.1 mouse_genomes_project 1 181183964 181184508 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0023192.1 MGP_LPJ_G0016629.1 mouse_genomes_project 1 173941962 173965948 + MGP_LPJ_P0023192 Tmco1 protein_coding protein_coding MGP_LPJ_T0023193.1 MGP_LPJ_G0016629.1 mouse_genomes_project 1 173942254 173965948 + MGP_LPJ_P0023193 Tmco1 protein_coding protein_coding MGP_LPJ_T0023194.1 MGP_LPJ_G0016629.1 mouse_genomes_project 1 173942320 173969107 + MGP_LPJ_P0023194 Tmco1 protein_coding nonsense_mediated_decay MGP_LPJ_T0023195.1 MGP_LPJ_G0016629.1 mouse_genomes_project 1 173949509 173965763 + MGP_LPJ_P0023195 Tmco1 protein_coding protein_coding MGP_LPJ_T0023285.1 MGP_LPJ_G0016656.1 mouse_genomes_project 1 177892089 177903006 + MGP_LPJ_P0023285 Fcgr4 protein_coding protein_coding MGP_LPJ_T0018926.1 MGP_LPJ_G0015771.1 mouse_genomes_project 1 14252699 14338544 - MGP_LPJ_P0018926 Ube2w protein_coding protein_coding MGP_LPJ_T0018927.1 MGP_LPJ_G0015771.1 mouse_genomes_project 1 14279498 14302041 - Ube2w protein_coding processed_transcript MGP_LPJ_T0018928.1 MGP_LPJ_G0015771.1 mouse_genomes_project 1 14285505 14338721 - MGP_LPJ_P0018928 Ube2w protein_coding protein_coding MGP_LPJ_T0018929.1 MGP_LPJ_G0015771.1 mouse_genomes_project 1 14298578 14338491 - MGP_LPJ_P0018929 Ube2w protein_coding nonsense_mediated_decay MGP_LPJ_T0018930.1 MGP_LPJ_G0015771.1 mouse_genomes_project 1 14300800 14338516 - Ube2w protein_coding retained_intron MGP_LPJ_T0018931.1 MGP_LPJ_G0015771.1 mouse_genomes_project 1 14321304 14338516 - Ube2w protein_coding retained_intron MGP_LPJ_T0021058.1 MGP_LPJ_G0016184.1 mouse_genomes_project 1 90034435 90049464 + Inpp5d protein_coding retained_intron MGP_LPJ_T0021059.1 MGP_LPJ_G0016184.1 mouse_genomes_project 1 90034441 90137181 + MGP_LPJ_P0021059 Inpp5d protein_coding protein_coding MGP_LPJ_T0021060.1 MGP_LPJ_G0016184.1 mouse_genomes_project 1 90034468 90057370 + Inpp5d protein_coding processed_transcript MGP_LPJ_T0021061.1 MGP_LPJ_G0016184.1 mouse_genomes_project 1 90034477 90137181 + MGP_LPJ_P0021061 Inpp5d protein_coding nonsense_mediated_decay MGP_LPJ_T0021062.1 MGP_LPJ_G0016184.1 mouse_genomes_project 1 90034478 90136372 + MGP_LPJ_P0021062 Inpp5d protein_coding protein_coding MGP_LPJ_T0021063.1 MGP_LPJ_G0016184.1 mouse_genomes_project 1 90034568 90136001 + MGP_LPJ_P0021063 Inpp5d protein_coding protein_coding MGP_LPJ_T0021064.1 MGP_LPJ_G0016184.1 mouse_genomes_project 1 90034706 90080121 + MGP_LPJ_P0021064 Inpp5d protein_coding protein_coding MGP_LPJ_T0021065.1 MGP_LPJ_G0016184.1 mouse_genomes_project 1 90035755 90080045 + MGP_LPJ_P0021065 Inpp5d protein_coding protein_coding MGP_LPJ_T0021066.1 MGP_LPJ_G0016184.1 mouse_genomes_project 1 90126055 90128828 + Inpp5d protein_coding processed_transcript MGP_LPJ_T0098091.1 MGP_LPJ_G0036372.1 mouse_genomes_project 1 140132564 140132665 - Gm26280 rRNA rRNA MGP_LPJ_T0024125.1 MGP_LPJ_G0016853.1 mouse_genomes_project 1 199237080 199260402 - MGP_LPJ_P0024125 Tatdn3 protein_coding protein_coding MGP_LPJ_T0024126.1 MGP_LPJ_G0016853.1 mouse_genomes_project 1 199237092 199260374 - MGP_LPJ_P0024126 Tatdn3 protein_coding protein_coding MGP_LPJ_T0024127.1 MGP_LPJ_G0016853.1 mouse_genomes_project 1 199237096 199260374 - MGP_LPJ_P0024127 Tatdn3 protein_coding protein_coding MGP_LPJ_T0024128.1 MGP_LPJ_G0016853.1 mouse_genomes_project 1 199237096 199260375 - MGP_LPJ_P0024128 Tatdn3 protein_coding protein_coding MGP_LPJ_T0024129.1 MGP_LPJ_G0016853.1 mouse_genomes_project 1 199237099 199241973 - Tatdn3 protein_coding retained_intron MGP_LPJ_T0024130.1 MGP_LPJ_G0016853.1 mouse_genomes_project 1 199252398 199256320 - Tatdn3 protein_coding retained_intron MGP_LPJ_T0024131.1 MGP_LPJ_G0016853.1 mouse_genomes_project 1 199255372 199256915 - Tatdn3 protein_coding retained_intron MGP_LPJ_T0024132.1 MGP_LPJ_G0016853.1 mouse_genomes_project 1 199256254 199260374 - Tatdn3 protein_coding retained_intron MGP_LPJ_T0024133.1 MGP_LPJ_G0016853.1 mouse_genomes_project 1 199257527 199260374 - Tatdn3 protein_coding retained_intron MGP_LPJ_T0019206.1 MGP_LPJ_G0015833.1 mouse_genomes_project 1 35150470 35159308 - MGP_LPJ_P0019206 Neurl3 protein_coding protein_coding MGP_LPJ_T0019207.1 MGP_LPJ_G0015833.1 mouse_genomes_project 1 35154734 35160326 - MGP_LPJ_P0019207 Neurl3 protein_coding protein_coding MGP_LPJ_T0098444.1 MGP_LPJ_G0036725.1 mouse_genomes_project 1 52698798 52701289 - Gm29670 sense_intronic sense_intronic MGP_LPJ_T0100016.1 MGP_LPJ_G0038279.1 mouse_genomes_project 1 133090307 133090441 + Gm23902 snoRNA snoRNA MGP_LPJ_T0000793.1 MGP_LPJ_G0000726.1 mouse_genomes_project 1 185832577 185833171 - TEC TEC MGP_LPJ_T0000794.1 MGP_LPJ_G0000726.1 mouse_genomes_project 1 185832623 185833169 - TEC pseudogene MGP_LPJ_T0099983.1 MGP_LPJ_G0038246.1 mouse_genomes_project 1 60567019 60567103 + Gm26293 snoRNA snoRNA MGP_LPJ_T0011935.1 MGP_LPJ_G0010026.1 mouse_genomes_project 1 21487424 21488413 + processed_pseudogene processed_pseudogene MGP_LPJ_T0019704.1 MGP_LPJ_G0015926.1 mouse_genomes_project 1 52833566 52837293 + Hibch protein_coding retained_intron MGP_LPJ_T0019705.1 MGP_LPJ_G0015926.1 mouse_genomes_project 1 52833614 52905968 + MGP_LPJ_P0019705 Hibch protein_coding protein_coding MGP_LPJ_T0019706.1 MGP_LPJ_G0015926.1 mouse_genomes_project 1 52833681 52871773 + Hibch protein_coding retained_intron MGP_LPJ_T0019707.1 MGP_LPJ_G0015926.1 mouse_genomes_project 1 52840367 52847030 + Hibch protein_coding processed_transcript MGP_LPJ_T0019708.1 MGP_LPJ_G0015926.1 mouse_genomes_project 1 52851638 52886600 + Hibch protein_coding processed_transcript MGP_LPJ_T0019709.1 MGP_LPJ_G0015926.1 mouse_genomes_project 1 52887912 52898992 + Hibch protein_coding retained_intron MGP_LPJ_T0098765.1 MGP_LPJ_G0037028.1 mouse_genomes_project 1 96636370 96636472 - Gm22089 snRNA snRNA MGP_LPJ_T0011879.1 MGP_LPJ_G0009970.1 mouse_genomes_project 1 4342447 4343753 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012297.1 MGP_LPJ_G0010388.1 mouse_genomes_project 1 163765199 163765721 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005767.1 MGP_LPJ_G0004841.1 mouse_genomes_project 1 60234162 60250352 + Gm29016 lincRNA lincRNA MGP_LPJ_T0011981.1 MGP_LPJ_G0010072.1 mouse_genomes_project 1 35891885 35893008 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023396.1 MGP_LPJ_G0016676.1 mouse_genomes_project 1 178280026 178300216 + MGP_LPJ_P0023396 Nectin4 protein_coding protein_coding MGP_LPJ_T0023397.1 MGP_LPJ_G0016676.1 mouse_genomes_project 1 178280279 178300527 + MGP_LPJ_P0023397 Nectin4 protein_coding protein_coding MGP_LPJ_T0023398.1 MGP_LPJ_G0016676.1 mouse_genomes_project 1 178280282 178300214 + MGP_LPJ_P0023398 Nectin4 protein_coding protein_coding MGP_LPJ_T0022646.1 MGP_LPJ_G0016527.1 mouse_genomes_project 1 161147035 161150315 - MGP_LPJ_P0022646 Ier5 protein_coding protein_coding MGP_LPJ_T0022092.1 MGP_LPJ_G0016412.1 mouse_genomes_project 1 138585057 138692156 - MGP_LPJ_P0022092 Atp2b4 protein_coding protein_coding MGP_LPJ_T0022093.1 MGP_LPJ_G0016412.1 mouse_genomes_project 1 138587231 138587436 - MGP_LPJ_P0022093 Atp2b4 protein_coding protein_coding MGP_LPJ_T0022094.1 MGP_LPJ_G0016412.1 mouse_genomes_project 1 138588212 138643411 - MGP_LPJ_P0022094 Atp2b4 protein_coding protein_coding MGP_LPJ_T0022095.1 MGP_LPJ_G0016412.1 mouse_genomes_project 1 138588212 138643411 - MGP_LPJ_P0022095 Atp2b4 protein_coding protein_coding MGP_LPJ_T0022096.1 MGP_LPJ_G0016412.1 mouse_genomes_project 1 138593334 138643345 - MGP_LPJ_P0022096 Atp2b4 protein_coding protein_coding MGP_LPJ_T0022097.1 MGP_LPJ_G0016412.1 mouse_genomes_project 1 138600983 138642945 - MGP_LPJ_P0022097 Atp2b4 protein_coding protein_coding MGP_LPJ_T0022098.1 MGP_LPJ_G0016412.1 mouse_genomes_project 1 138603325 138604932 - Atp2b4 protein_coding retained_intron MGP_LPJ_T0022099.1 MGP_LPJ_G0016412.1 mouse_genomes_project 1 138643363 138692151 - Atp2b4 protein_coding processed_transcript MGP_LPJ_T0018780.1 MGP_LPJ_G0015747.1 mouse_genomes_project 1 7447849 7464812 - MGP_LPJ_P0018780 Ppp1r42 protein_coding protein_coding MGP_LPJ_T0018781.1 MGP_LPJ_G0015747.1 mouse_genomes_project 1 7447849 7482181 - MGP_LPJ_P0018781 Ppp1r42 protein_coding nonsense_mediated_decay MGP_LPJ_T0018782.1 MGP_LPJ_G0015747.1 mouse_genomes_project 1 7448043 7482091 - MGP_LPJ_P0018782 Ppp1r42 protein_coding protein_coding MGP_LPJ_T0018783.1 MGP_LPJ_G0015747.1 mouse_genomes_project 1 7448048 7487849 - MGP_LPJ_P0018783 Ppp1r42 protein_coding nonsense_mediated_decay MGP_LPJ_T0018784.1 MGP_LPJ_G0015747.1 mouse_genomes_project 1 7474163 7487849 - Ppp1r42 protein_coding retained_intron MGP_LPJ_T0101695.1 MGP_LPJ_G0039733.1 mouse_genomes_project 1 90624564 90625408 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0012008.1 MGP_LPJ_G0010099.1 mouse_genomes_project 1 45211288 45215743 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012038.1 MGP_LPJ_G0010129.1 mouse_genomes_project 1 53340232 53340805 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000730.1 MGP_LPJ_G0000663.1 mouse_genomes_project 1 162779049 162779449 + TEC TEC MGP_LPJ_T0002864.1 MGP_LPJ_G0002707.1 mouse_genomes_project 1 77062052 77068775 - Gm15179 antisense antisense MGP_LPJ_T0002865.1 MGP_LPJ_G0002707.1 mouse_genomes_project 1 77062112 77064295 - Gm15179 antisense antisense MGP_LPJ_T0012312.1 MGP_LPJ_G0010403.1 mouse_genomes_project 1 170663883 170664239 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000711.1 MGP_LPJ_G0000644.1 mouse_genomes_project 1 155029426 155032151 - TEC TEC MGP_LPJ_T0019980.1 MGP_LPJ_G0015981.1 mouse_genomes_project 1 60347595 60352127 + MGP_LPJ_P0019980 Fzd7 protein_coding protein_coding MGP_LPJ_T0000795.1 MGP_LPJ_G0000727.1 mouse_genomes_project 1 185903320 185905190 + TEC TEC MGP_LPJ_T0005833.1 MGP_LPJ_G0004891.1 mouse_genomes_project 1 84859310 84859850 + Gm28942 lincRNA lincRNA MGP_LPJ_T0011953.1 MGP_LPJ_G0010044.1 mouse_genomes_project 1 29674140 29674366 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098389.1 MGP_LPJ_G0036670.1 mouse_genomes_project 1 90208728 90208993 + Scarna6 scaRNA scaRNA MGP_LPJ_T0019418.1 MGP_LPJ_G0015870.1 mouse_genomes_project 1 38443784 38447274 + MGP_LPJ_P0019418 Rpl31 protein_coding protein_coding MGP_LPJ_T0019419.1 MGP_LPJ_G0015870.1 mouse_genomes_project 1 38444055 38447241 + MGP_LPJ_P0019419 Rpl31 protein_coding protein_coding MGP_LPJ_T0019420.1 MGP_LPJ_G0015870.1 mouse_genomes_project 1 38445757 38447274 + Rpl31 protein_coding retained_intron MGP_LPJ_T0098463.1 MGP_LPJ_G0036743.1 mouse_genomes_project 1 167059460 167060100 - Gm37328 sense_intronic sense_intronic MGP_LPJ_T0020753.1 MGP_LPJ_G0016119.1 mouse_genomes_project 1 81361126 81366579 - MGP_LPJ_P0020753 Scg2 protein_coding protein_coding MGP_LPJ_T0020754.1 MGP_LPJ_G0016119.1 mouse_genomes_project 1 81361126 81366501 - MGP_LPJ_P0020754 Scg2 protein_coding protein_coding MGP_LPJ_T0021634.1 MGP_LPJ_G0016312.1 mouse_genomes_project 1 122897531 123126590 - MGP_LPJ_P0021634 Gli2 protein_coding protein_coding MGP_LPJ_T0021635.1 MGP_LPJ_G0016312.1 mouse_genomes_project 1 122911869 123126310 - MGP_LPJ_P0021635 Gli2 protein_coding protein_coding MGP_LPJ_T0021636.1 MGP_LPJ_G0016312.1 mouse_genomes_project 1 122911869 123126310 - MGP_LPJ_P0021636 Gli2 protein_coding nonsense_mediated_decay MGP_LPJ_T0021637.1 MGP_LPJ_G0016312.1 mouse_genomes_project 1 122911869 123126310 - MGP_LPJ_P0021637 Gli2 protein_coding nonsense_mediated_decay MGP_LPJ_T0021638.1 MGP_LPJ_G0016312.1 mouse_genomes_project 1 122911869 123126310 - MGP_LPJ_P0021638 Gli2 protein_coding nonsense_mediated_decay MGP_LPJ_T0021639.1 MGP_LPJ_G0016312.1 mouse_genomes_project 1 122911869 123126310 - MGP_LPJ_P0021639 Gli2 protein_coding nonsense_mediated_decay MGP_LPJ_T0021640.1 MGP_LPJ_G0016312.1 mouse_genomes_project 1 122911871 123126310 - MGP_LPJ_P0021640 Gli2 protein_coding protein_coding MGP_LPJ_T0021641.1 MGP_LPJ_G0016312.1 mouse_genomes_project 1 122911871 123126310 - MGP_LPJ_P0021641 Gli2 protein_coding protein_coding MGP_LPJ_T0021642.1 MGP_LPJ_G0016312.1 mouse_genomes_project 1 122931399 123049678 - Gli2 protein_coding processed_transcript MGP_LPJ_T0005975.1 MGP_LPJ_G0005008.1 mouse_genomes_project 1 163086803 163176789 - Gm28694 lincRNA lincRNA MGP_LPJ_T0000575.1 MGP_LPJ_G0000510.1 mouse_genomes_project 1 85505109 85505912 - TEC TEC MGP_LPJ_T0000491.1 MGP_LPJ_G0000426.1 mouse_genomes_project 1 39162886 39164224 - TEC TEC MGP_LPJ_T0021439.1 MGP_LPJ_G0016267.1 mouse_genomes_project 1 96654685 96656234 + MGP_LPJ_P0021439 protein_coding protein_coding MGP_LPJ_T0021440.1 MGP_LPJ_G0016267.1 mouse_genomes_project 1 96655016 96697620 + MGP_LPJ_P0021440 protein_coding protein_coding MGP_LPJ_T0021441.1 MGP_LPJ_G0016267.1 mouse_genomes_project 1 96655050 96697620 + MGP_LPJ_P0021441 protein_coding protein_coding MGP_LPJ_T0021442.1 MGP_LPJ_G0016267.1 mouse_genomes_project 1 96656058 96666868 + protein_coding processed_transcript MGP_LPJ_T0021443.1 MGP_LPJ_G0016267.1 mouse_genomes_project 1 96656060 96673870 + MGP_LPJ_P0021443 protein_coding protein_coding MGP_LPJ_T0021444.1 MGP_LPJ_G0016267.1 mouse_genomes_project 1 96656337 96667277 + protein_coding processed_transcript MGP_LPJ_T0098730.1 MGP_LPJ_G0036993.1 mouse_genomes_project 1 23373548 23373655 - Gm22260 snRNA snRNA MGP_LPJ_T0021295.1 MGP_LPJ_G0016240.1 mouse_genomes_project 1 95417714 95420479 - protein_coding retained_intron MGP_LPJ_T0021296.1 MGP_LPJ_G0016240.1 mouse_genomes_project 1 95417714 95422493 - MGP_LPJ_P0021296 protein_coding nonsense_mediated_decay MGP_LPJ_T0021297.1 MGP_LPJ_G0016240.1 mouse_genomes_project 1 95417714 95422555 - MGP_LPJ_P0021297 protein_coding protein_coding MGP_LPJ_T0021298.1 MGP_LPJ_G0016240.1 mouse_genomes_project 1 95417714 95421134 - MGP_LPJ_P0021298 protein_coding protein_coding MGP_LPJ_T0021299.1 MGP_LPJ_G0016240.1 mouse_genomes_project 1 95419939 95422555 - protein_coding retained_intron MGP_LPJ_T0005802.1 MGP_LPJ_G0004869.1 mouse_genomes_project 1 73651637 73667061 - Gm4319 lincRNA lincRNA MGP_LPJ_T0002817.1 MGP_LPJ_G0002674.1 mouse_genomes_project 1 39707174 39715801 - Gm35801 antisense antisense MGP_LPJ_T0002818.1 MGP_LPJ_G0002674.1 mouse_genomes_project 1 39707194 39715787 - Gm35801 antisense antisense MGP_LPJ_T0022215.1 MGP_LPJ_G0016442.1 mouse_genomes_project 1 140368899 140374622 - MGP_LPJ_P0022215 Shisa4 protein_coding unknown_likely_coding MGP_LPJ_T0022216.1 MGP_LPJ_G0016442.1 mouse_genomes_project 1 140370720 140373111 - Shisa4 protein_coding retained_intron MGP_LPJ_T0022217.1 MGP_LPJ_G0016442.1 mouse_genomes_project 1 140373548 140374738 - Shisa4 protein_coding retained_intron MGP_LPJ_T0002783.1 MGP_LPJ_G0002648.1 mouse_genomes_project 1 13938167 13946485 + Gm7568 antisense antisense MGP_LPJ_T0002784.1 MGP_LPJ_G0002648.1 mouse_genomes_project 1 13938167 13955460 + Gm7568 antisense antisense MGP_LPJ_T0002785.1 MGP_LPJ_G0002648.1 mouse_genomes_project 1 13938204 13946481 + Gm7568 antisense antisense MGP_LPJ_T0012286.1 MGP_LPJ_G0010377.1 mouse_genomes_project 1 157306519 157306760 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009491.1 MGP_LPJ_G0007609.1 mouse_genomes_project 1 27770837 27770927 - Gm23785 miRNA miRNA MGP_LPJ_T0011900.1 MGP_LPJ_G0009991.1 mouse_genomes_project 1 8743983 8744592 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012069.1 MGP_LPJ_G0010160.1 mouse_genomes_project 1 63667554 63668641 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098446.1 MGP_LPJ_G0036727.1 mouse_genomes_project 1 71020159 71023646 - Gm29112 sense_intronic sense_intronic MGP_LPJ_T0012024.1 MGP_LPJ_G0010115.1 mouse_genomes_project 1 49307818 49308258 + processed_pseudogene processed_pseudogene MGP_LPJ_T0022962.1 MGP_LPJ_G0016578.1 mouse_genomes_project 1 169033390 169063910 + MGP_LPJ_P0022962 Vamp4 protein_coding protein_coding MGP_LPJ_T0022963.1 MGP_LPJ_G0016578.1 mouse_genomes_project 1 169033502 169046962 + Vamp4 protein_coding retained_intron MGP_LPJ_T0022964.1 MGP_LPJ_G0016578.1 mouse_genomes_project 1 169033533 169063909 + MGP_LPJ_P0022964 Vamp4 protein_coding protein_coding MGP_LPJ_T0022965.1 MGP_LPJ_G0016578.1 mouse_genomes_project 1 169033703 169063904 + MGP_LPJ_P0022965 Vamp4 protein_coding protein_coding MGP_LPJ_T0022966.1 MGP_LPJ_G0016578.1 mouse_genomes_project 1 169037696 169059532 + Vamp4 protein_coding processed_transcript MGP_LPJ_T0018716.1 MGP_LPJ_G0015737.1 mouse_genomes_project 1 3773493 4158202 + MGP_LPJ_P0018716 St18 protein_coding protein_coding MGP_LPJ_T0018717.1 MGP_LPJ_G0015737.1 mouse_genomes_project 1 3773593 4158208 + MGP_LPJ_P0018717 St18 protein_coding protein_coding MGP_LPJ_T0018718.1 MGP_LPJ_G0015737.1 mouse_genomes_project 1 4023303 4158208 + MGP_LPJ_P0018718 St18 protein_coding protein_coding MGP_LPJ_T0018719.1 MGP_LPJ_G0015737.1 mouse_genomes_project 1 4023305 4091973 + MGP_LPJ_P0018719 St18 protein_coding protein_coding MGP_LPJ_T0018720.1 MGP_LPJ_G0015737.1 mouse_genomes_project 1 4023322 4092098 + MGP_LPJ_P0018720 St18 protein_coding protein_coding MGP_LPJ_T0018721.1 MGP_LPJ_G0015737.1 mouse_genomes_project 1 4023353 4156738 + MGP_LPJ_P0018721 St18 protein_coding protein_coding MGP_LPJ_T0018722.1 MGP_LPJ_G0015737.1 mouse_genomes_project 1 4023354 4156081 + MGP_LPJ_P0018722 St18 protein_coding protein_coding MGP_LPJ_T0018723.1 MGP_LPJ_G0015737.1 mouse_genomes_project 1 4029443 4099230 + MGP_LPJ_P0018723 St18 protein_coding protein_coding MGP_LPJ_T0018724.1 MGP_LPJ_G0015737.1 mouse_genomes_project 1 4032147 4158208 + MGP_LPJ_P0018724 St18 protein_coding protein_coding MGP_LPJ_T0018725.1 MGP_LPJ_G0015737.1 mouse_genomes_project 1 4099332 4106469 + MGP_LPJ_P0018725 St18 protein_coding nonsense_mediated_decay MGP_LPJ_T0018726.1 MGP_LPJ_G0015737.1 mouse_genomes_project 1 4114707 4131588 + St18 protein_coding processed_transcript MGP_LPJ_T0018727.1 MGP_LPJ_G0015737.1 mouse_genomes_project 1 4124864 4146209 + St18 protein_coding processed_transcript MGP_LPJ_T0018728.1 MGP_LPJ_G0015737.1 mouse_genomes_project 1 4154600 4156872 + MGP_LPJ_P0018728 St18 protein_coding protein_coding MGP_LPJ_T0005898.1 MGP_LPJ_G0004947.1 mouse_genomes_project 1 123618939 123625626 - 3830432H09Rik lincRNA lincRNA MGP_LPJ_T0005899.1 MGP_LPJ_G0004947.1 mouse_genomes_project 1 123619752 123624706 - 3830432H09Rik lincRNA lincRNA MGP_LPJ_T0022615.1 MGP_LPJ_G0016518.1 mouse_genomes_project 1 159708688 159713804 + MGP_LPJ_P0022615 Rgs16 protein_coding protein_coding MGP_LPJ_T0009572.1 MGP_LPJ_G0007690.1 mouse_genomes_project 1 185930765 185930886 - Gm27458 miRNA miRNA MGP_LPJ_T0021893.1 MGP_LPJ_G0016371.1 mouse_genomes_project 1 135996499 136007263 - Ikbke protein_coding retained_intron MGP_LPJ_T0021894.1 MGP_LPJ_G0016371.1 mouse_genomes_project 1 135996753 136021687 - MGP_LPJ_P0021894 Ikbke protein_coding protein_coding MGP_LPJ_T0021895.1 MGP_LPJ_G0016371.1 mouse_genomes_project 1 135996758 136019039 - MGP_LPJ_P0021895 Ikbke protein_coding protein_coding MGP_LPJ_T0021896.1 MGP_LPJ_G0016371.1 mouse_genomes_project 1 136001176 136008403 - Ikbke protein_coding retained_intron MGP_LPJ_T0021897.1 MGP_LPJ_G0016371.1 mouse_genomes_project 1 136005492 136012657 - Ikbke protein_coding retained_intron MGP_LPJ_T0021898.1 MGP_LPJ_G0016371.1 mouse_genomes_project 1 136013013 136014655 - Ikbke protein_coding retained_intron MGP_LPJ_T0021899.1 MGP_LPJ_G0016371.1 mouse_genomes_project 1 136015904 136018801 - MGP_LPJ_P0021899 Ikbke protein_coding protein_coding MGP_LPJ_T0005938.1 MGP_LPJ_G0004981.1 mouse_genomes_project 1 141730824 141749779 + Gm19705 lincRNA lincRNA MGP_LPJ_T0005939.1 MGP_LPJ_G0004981.1 mouse_genomes_project 1 141736527 141742774 + Gm19705 lincRNA lincRNA MGP_LPJ_T0005940.1 MGP_LPJ_G0004981.1 mouse_genomes_project 1 141743442 141751798 + Gm19705 lincRNA lincRNA MGP_LPJ_T0005941.1 MGP_LPJ_G0004981.1 mouse_genomes_project 1 141743675 141751796 + Gm19705 lincRNA lincRNA MGP_LPJ_T0021433.1 MGP_LPJ_G0016265.1 mouse_genomes_project 1 96618753 96628088 - MGP_LPJ_P0021433 Dtymk protein_coding protein_coding MGP_LPJ_T0021434.1 MGP_LPJ_G0016265.1 mouse_genomes_project 1 96618901 96625155 - MGP_LPJ_P0021434 Dtymk protein_coding protein_coding MGP_LPJ_T0021435.1 MGP_LPJ_G0016265.1 mouse_genomes_project 1 96624533 96625515 - Dtymk protein_coding processed_transcript MGP_LPJ_T0021436.1 MGP_LPJ_G0016265.1 mouse_genomes_project 1 96626217 96628060 - MGP_LPJ_P0021436 Dtymk protein_coding protein_coding MGP_LPJ_T0022232.1 MGP_LPJ_G0016444.1 mouse_genomes_project 1 140437326 140591268 - MGP_LPJ_P0022232 Nav1 protein_coding protein_coding MGP_LPJ_T0022233.1 MGP_LPJ_G0016444.1 mouse_genomes_project 1 140437326 140590918 - MGP_LPJ_P0022233 Nav1 protein_coding protein_coding MGP_LPJ_T0022234.1 MGP_LPJ_G0016444.1 mouse_genomes_project 1 140439248 140614425 - MGP_LPJ_P0022234 Nav1 protein_coding protein_coding MGP_LPJ_T0022235.1 MGP_LPJ_G0016444.1 mouse_genomes_project 1 140454762 140456295 - Nav1 protein_coding retained_intron MGP_LPJ_T0022236.1 MGP_LPJ_G0016444.1 mouse_genomes_project 1 140457703 140470061 - MGP_LPJ_P0022236 Nav1 protein_coding protein_coding MGP_LPJ_T0022237.1 MGP_LPJ_G0016444.1 mouse_genomes_project 1 140460169 140463577 - Nav1 protein_coding retained_intron MGP_LPJ_T0022238.1 MGP_LPJ_G0016444.1 mouse_genomes_project 1 140460169 140513240 - Nav1 protein_coding retained_intron MGP_LPJ_T0022239.1 MGP_LPJ_G0016444.1 mouse_genomes_project 1 140461067 140513307 - Nav1 protein_coding processed_transcript MGP_LPJ_T0098790.1 MGP_LPJ_G0037053.1 mouse_genomes_project 1 155308539 155308645 - Gm23535 snRNA snRNA MGP_LPJ_T0005750.1 MGP_LPJ_G0004830.1 mouse_genomes_project 1 51477216 51482458 - Gm17767 lincRNA lincRNA MGP_LPJ_T0005751.1 MGP_LPJ_G0004830.1 mouse_genomes_project 1 51479633 51574256 - Gm17767 lincRNA lincRNA MGP_LPJ_T0098778.1 MGP_LPJ_G0037041.1 mouse_genomes_project 1 133514975 133515086 - Gm23056 snRNA snRNA MGP_LPJ_T0022128.1 MGP_LPJ_G0016422.1 mouse_genomes_project 1 139225351 139259200 - MGP_LPJ_P0022128 Ppfia4 protein_coding protein_coding MGP_LPJ_T0022129.1 MGP_LPJ_G0016422.1 mouse_genomes_project 1 139225352 139233414 - Ppfia4 protein_coding processed_transcript MGP_LPJ_T0022130.1 MGP_LPJ_G0016422.1 mouse_genomes_project 1 139225356 139233376 - Ppfia4 protein_coding retained_intron MGP_LPJ_T0022131.1 MGP_LPJ_G0016422.1 mouse_genomes_project 1 139226068 139264862 - MGP_LPJ_P0022131 Ppfia4 protein_coding protein_coding MGP_LPJ_T0022132.1 MGP_LPJ_G0016422.1 mouse_genomes_project 1 139226948 139242475 - Ppfia4 protein_coding retained_intron MGP_LPJ_T0022133.1 MGP_LPJ_G0016422.1 mouse_genomes_project 1 139227645 139278107 - MGP_LPJ_P0022133 Ppfia4 protein_coding unknown_likely_coding MGP_LPJ_T0024088.1 MGP_LPJ_G0016846.1 mouse_genomes_project 1 197990400 198036050 - MGP_LPJ_P0024088 Smyd2 protein_coding protein_coding MGP_LPJ_T0024089.1 MGP_LPJ_G0016846.1 mouse_genomes_project 1 197990402 197998911 - Smyd2 protein_coding processed_transcript MGP_LPJ_T0024090.1 MGP_LPJ_G0016846.1 mouse_genomes_project 1 197990550 197992281 - Smyd2 protein_coding retained_intron MGP_LPJ_T0024091.1 MGP_LPJ_G0016846.1 mouse_genomes_project 1 197994954 198035940 - Smyd2 protein_coding retained_intron MGP_LPJ_T0018747.1 MGP_LPJ_G0015740.1 mouse_genomes_project 1 6991009 7023425 + MGP_LPJ_P0018747 Adhfe1 protein_coding protein_coding MGP_LPJ_T0018748.1 MGP_LPJ_G0015740.1 mouse_genomes_project 1 6991116 7022357 + MGP_LPJ_P0018748 Adhfe1 protein_coding nonsense_mediated_decay MGP_LPJ_T0018749.1 MGP_LPJ_G0015740.1 mouse_genomes_project 1 6991153 6997740 + MGP_LPJ_P0018749 Adhfe1 protein_coding nonsense_mediated_decay MGP_LPJ_T0018750.1 MGP_LPJ_G0015740.1 mouse_genomes_project 1 6991168 6999619 + MGP_LPJ_P0018750 Adhfe1 protein_coding nonsense_mediated_decay MGP_LPJ_T0018751.1 MGP_LPJ_G0015740.1 mouse_genomes_project 1 6991180 7026428 + MGP_LPJ_P0018751 Adhfe1 protein_coding nonsense_mediated_decay MGP_LPJ_T0019516.1 MGP_LPJ_G0015894.1 mouse_genomes_project 1 42774412 42865783 + MGP_LPJ_P0019516 Nck2 protein_coding protein_coding MGP_LPJ_T0019517.1 MGP_LPJ_G0015894.1 mouse_genomes_project 1 42775584 42792062 + Nck2 protein_coding processed_transcript MGP_LPJ_T0019518.1 MGP_LPJ_G0015894.1 mouse_genomes_project 1 42775584 42903866 + MGP_LPJ_P0019518 Nck2 protein_coding protein_coding MGP_LPJ_T0019519.1 MGP_LPJ_G0015894.1 mouse_genomes_project 1 42787140 42792090 + Nck2 protein_coding processed_transcript MGP_LPJ_T0019520.1 MGP_LPJ_G0015894.1 mouse_genomes_project 1 42864555 42886928 + MGP_LPJ_P0019520 Nck2 protein_coding protein_coding MGP_LPJ_T0019521.1 MGP_LPJ_G0015894.1 mouse_genomes_project 1 42865719 42902681 + MGP_LPJ_P0019521 Nck2 protein_coding protein_coding MGP_LPJ_T0020254.1 MGP_LPJ_G0016031.1 mouse_genomes_project 1 68037281 68070079 - MGP_LPJ_P0020254 Acadl protein_coding protein_coding MGP_LPJ_T0020255.1 MGP_LPJ_G0016031.1 mouse_genomes_project 1 68051615 68065159 - Acadl protein_coding processed_transcript MGP_LPJ_T0009514.1 MGP_LPJ_G0007632.1 mouse_genomes_project 1 68923796 68923874 + Gm22548 miRNA miRNA MGP_LPJ_T0012050.1 MGP_LPJ_G0010141.1 mouse_genomes_project 1 59397892 59398244 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012099.1 MGP_LPJ_G0010190.1 mouse_genomes_project 1 73220961 73222766 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016918.1 MGP_LPJ_G0015004.1 mouse_genomes_project 1 32890098 32902436 - Gm26788 processed_transcript antisense MGP_LPJ_T0016919.1 MGP_LPJ_G0015004.1 mouse_genomes_project 1 32899189 32902611 - Gm26788 processed_transcript retained_intron MGP_LPJ_T0018669.1 MGP_LPJ_G0015728.1 mouse_genomes_project 1 2023046 2068365 + MGP_LPJ_P0018669 Lypla1 protein_coding nonsense_mediated_decay MGP_LPJ_T0018670.1 MGP_LPJ_G0015728.1 mouse_genomes_project 1 2023081 2066014 + MGP_LPJ_P0018670 Lypla1 protein_coding protein_coding MGP_LPJ_T0018671.1 MGP_LPJ_G0015728.1 mouse_genomes_project 1 2023088 2060561 + MGP_LPJ_P0018671 Lypla1 protein_coding protein_coding MGP_LPJ_T0018673.1 MGP_LPJ_G0015728.1 mouse_genomes_project 1 2023154 2064449 + MGP_LPJ_P0018673 Lypla1 protein_coding protein_coding MGP_LPJ_T0018674.1 MGP_LPJ_G0015728.1 mouse_genomes_project 1 2023156 2060244 + MGP_LPJ_P0018674 Lypla1 protein_coding protein_coding MGP_LPJ_T0018675.1 MGP_LPJ_G0015728.1 mouse_genomes_project 1 2023169 2064627 + MGP_LPJ_P0018675 Lypla1 protein_coding protein_coding MGP_LPJ_T0018676.1 MGP_LPJ_G0015728.1 mouse_genomes_project 1 2023199 2066015 + MGP_LPJ_P0018676 Lypla1 protein_coding protein_coding MGP_LPJ_T0018677.1 MGP_LPJ_G0015728.1 mouse_genomes_project 1 2056179 2062102 + Lypla1 protein_coding retained_intron MGP_LPJ_T0002923.1 MGP_LPJ_G0002752.1 mouse_genomes_project 1 140590335 140605501 + Gm4793 antisense antisense MGP_LPJ_T0000607.1 MGP_LPJ_G0000542.1 mouse_genomes_project 1 98703963 98706053 + TEC TEC MGP_LPJ_T0100003.1 MGP_LPJ_G0038266.1 mouse_genomes_project 1 105307963 105308095 - Gm24122 snoRNA snoRNA MGP_LPJ_T0022039.1 MGP_LPJ_G0016399.1 mouse_genomes_project 1 137962318 137973742 + MGP_LPJ_P0022039 Ppp1r15b protein_coding protein_coding MGP_LPJ_T0022040.1 MGP_LPJ_G0016399.1 mouse_genomes_project 1 137962519 137973742 + Ppp1r15b protein_coding processed_transcript MGP_LPJ_T0021854.1 MGP_LPJ_G0016358.1 mouse_genomes_project 1 135427219 135436057 + MGP_LPJ_P0021854 Yod1 protein_coding protein_coding MGP_LPJ_T0005814.1 MGP_LPJ_G0004876.1 mouse_genomes_project 1 75259811 75524276 - 6030407O03Rik lincRNA lincRNA MGP_LPJ_T0005815.1 MGP_LPJ_G0004876.1 mouse_genomes_project 1 75259811 75387664 - 6030407O03Rik lincRNA lincRNA MGP_LPJ_T0020830.1 MGP_LPJ_G0016136.1 mouse_genomes_project 1 84880296 84948025 + MGP_LPJ_P0020830 Agfg1 protein_coding protein_coding MGP_LPJ_T0020831.1 MGP_LPJ_G0016136.1 mouse_genomes_project 1 84880310 84943224 + MGP_LPJ_P0020831 Agfg1 protein_coding protein_coding MGP_LPJ_T0020832.1 MGP_LPJ_G0016136.1 mouse_genomes_project 1 84880482 84943224 + MGP_LPJ_P0020832 Agfg1 protein_coding protein_coding MGP_LPJ_T0020833.1 MGP_LPJ_G0016136.1 mouse_genomes_project 1 84880484 84943122 + MGP_LPJ_P0020833 Agfg1 protein_coding protein_coding MGP_LPJ_T0020834.1 MGP_LPJ_G0016136.1 mouse_genomes_project 1 84880487 84942364 + MGP_LPJ_P0020834 Agfg1 protein_coding protein_coding MGP_LPJ_T0020835.1 MGP_LPJ_G0016136.1 mouse_genomes_project 1 84880487 84942518 + MGP_LPJ_P0020835 Agfg1 protein_coding protein_coding MGP_LPJ_T0020836.1 MGP_LPJ_G0016136.1 mouse_genomes_project 1 84880547 84941965 + MGP_LPJ_P0020836 Agfg1 protein_coding protein_coding MGP_LPJ_T0020837.1 MGP_LPJ_G0016136.1 mouse_genomes_project 1 84880886 84926869 + MGP_LPJ_P0020837 Agfg1 protein_coding protein_coding MGP_LPJ_T0000797.1 MGP_LPJ_G0000729.1 mouse_genomes_project 1 187822160 187824831 - TEC TEC MGP_LPJ_T0019096.1 MGP_LPJ_G0015814.1 mouse_genomes_project 1 30709894 31308670 + MGP_LPJ_P0019096 Khdrbs2 protein_coding protein_coding MGP_LPJ_T0019097.1 MGP_LPJ_G0015814.1 mouse_genomes_project 1 30709909 30790873 + MGP_LPJ_P0019097 Khdrbs2 protein_coding protein_coding MGP_LPJ_T0019098.1 MGP_LPJ_G0015814.1 mouse_genomes_project 1 30709928 30891851 + MGP_LPJ_P0019098 Khdrbs2 protein_coding protein_coding MGP_LPJ_T0019099.1 MGP_LPJ_G0015814.1 mouse_genomes_project 1 30710067 30867530 + MGP_LPJ_P0019099 Khdrbs2 protein_coding protein_coding MGP_LPJ_T0019100.1 MGP_LPJ_G0015814.1 mouse_genomes_project 1 30870643 30971711 + Khdrbs2 protein_coding processed_transcript MGP_LPJ_T0012196.1 MGP_LPJ_G0010287.1 mouse_genomes_project 1 116642459 116644603 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012127.1 MGP_LPJ_G0010218.1 mouse_genomes_project 1 88676534 88676864 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100028.1 MGP_LPJ_G0038291.1 mouse_genomes_project 1 166264807 166264917 - Gm24719 snoRNA snoRNA MGP_LPJ_T0000753.1 MGP_LPJ_G0000686.1 mouse_genomes_project 1 167243917 167244838 + TEC TEC MGP_LPJ_T0019478.1 MGP_LPJ_G0015883.1 mouse_genomes_project 1 39648337 39685240 + MGP_LPJ_P0019478 Il18rap protein_coding protein_coding MGP_LPJ_T0019479.1 MGP_LPJ_G0015883.1 mouse_genomes_project 1 39648380 39672950 + Il18rap protein_coding retained_intron MGP_LPJ_T0019480.1 MGP_LPJ_G0015883.1 mouse_genomes_project 1 39648423 39660272 + Il18rap protein_coding retained_intron MGP_LPJ_T0019481.1 MGP_LPJ_G0015883.1 mouse_genomes_project 1 39675132 39681438 + Il18rap protein_coding retained_intron MGP_LPJ_T0019069.1 MGP_LPJ_G0015808.1 mouse_genomes_project 1 27091437 27095570 - MGP_LPJ_P0019069 Gm597 protein_coding protein_coding MGP_LPJ_T0005682.1 MGP_LPJ_G0004781.1 mouse_genomes_project 1 18522412 18527740 + Gm28653 lincRNA lincRNA MGP_LPJ_T0100021.1 MGP_LPJ_G0038284.1 mouse_genomes_project 1 142830842 142830958 + Gm22727 snoRNA snoRNA MGP_LPJ_T0022893.1 MGP_LPJ_G0016566.1 mouse_genomes_project 1 167412524 167431896 + MGP_LPJ_P0022893 Cenpl protein_coding protein_coding MGP_LPJ_T0022894.1 MGP_LPJ_G0016566.1 mouse_genomes_project 1 167412578 167431514 + MGP_LPJ_P0022894 Cenpl protein_coding protein_coding MGP_LPJ_T0022895.1 MGP_LPJ_G0016566.1 mouse_genomes_project 1 167412578 167431514 + MGP_LPJ_P0022895 Cenpl protein_coding protein_coding MGP_LPJ_T0022896.1 MGP_LPJ_G0016566.1 mouse_genomes_project 1 167412703 167431500 + MGP_LPJ_P0022896 Cenpl protein_coding nonsense_mediated_decay MGP_LPJ_T0022897.1 MGP_LPJ_G0016566.1 mouse_genomes_project 1 167412761 167431500 + MGP_LPJ_P0022897 Cenpl protein_coding nonsense_mediated_decay MGP_LPJ_T0022898.1 MGP_LPJ_G0016566.1 mouse_genomes_project 1 167412777 167431900 + MGP_LPJ_P0022898 Cenpl protein_coding nonsense_mediated_decay MGP_LPJ_T0022899.1 MGP_LPJ_G0016566.1 mouse_genomes_project 1 167412796 167428739 + MGP_LPJ_P0022899 Cenpl protein_coding nonsense_mediated_decay MGP_LPJ_T0022900.1 MGP_LPJ_G0016566.1 mouse_genomes_project 1 167412827 167431514 + MGP_LPJ_P0022900 Cenpl protein_coding nonsense_mediated_decay MGP_LPJ_T0022901.1 MGP_LPJ_G0016566.1 mouse_genomes_project 1 167414215 167414815 + Cenpl protein_coding processed_transcript MGP_LPJ_T0022902.1 MGP_LPJ_G0016566.1 mouse_genomes_project 1 167421270 167428650 + Cenpl protein_coding processed_transcript MGP_LPJ_T0023093.1 MGP_LPJ_G0016611.1 mouse_genomes_project 1 172004598 172008613 + Mpc2 protein_coding retained_intron MGP_LPJ_T0023094.1 MGP_LPJ_G0016611.1 mouse_genomes_project 1 172004998 172024999 + MGP_LPJ_P0023094 Mpc2 protein_coding protein_coding MGP_LPJ_T0023095.1 MGP_LPJ_G0016611.1 mouse_genomes_project 1 172005185 172021479 + Mpc2 protein_coding retained_intron MGP_LPJ_T0023096.1 MGP_LPJ_G0016611.1 mouse_genomes_project 1 172005326 172024893 + MGP_LPJ_P0023096 Mpc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0023097.1 MGP_LPJ_G0016611.1 mouse_genomes_project 1 172021926 172024904 + Mpc2 protein_coding processed_transcript MGP_LPJ_T0018771.1 MGP_LPJ_G0015745.1 mouse_genomes_project 1 7384801 7399582 + MGP_LPJ_P0018771 Mcmdc2 protein_coding protein_coding MGP_LPJ_T0018772.1 MGP_LPJ_G0015745.1 mouse_genomes_project 1 7384801 7420192 + MGP_LPJ_P0018772 Mcmdc2 protein_coding protein_coding MGP_LPJ_T0018773.1 MGP_LPJ_G0015745.1 mouse_genomes_project 1 7384831 7419692 + MGP_LPJ_P0018773 Mcmdc2 protein_coding protein_coding MGP_LPJ_T0018774.1 MGP_LPJ_G0015745.1 mouse_genomes_project 1 7384833 7421322 + MGP_LPJ_P0018774 Mcmdc2 protein_coding protein_coding MGP_LPJ_T0018775.1 MGP_LPJ_G0015745.1 mouse_genomes_project 1 7387495 7398323 + MGP_LPJ_P0018775 Mcmdc2 protein_coding protein_coding MGP_LPJ_T0018776.1 MGP_LPJ_G0015745.1 mouse_genomes_project 1 7387880 7416259 + MGP_LPJ_P0018776 Mcmdc2 protein_coding unknown_likely_coding MGP_LPJ_T0018777.1 MGP_LPJ_G0015745.1 mouse_genomes_project 1 7410910 7420192 + MGP_LPJ_P0018777 Mcmdc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0005990.1 MGP_LPJ_G0005019.1 mouse_genomes_project 1 170988257 170989805 + Gm32391 lincRNA lincRNA MGP_LPJ_T0098762.1 MGP_LPJ_G0037025.1 mouse_genomes_project 1 89760294 89760401 - Gm22549 snRNA snRNA MGP_LPJ_T0023560.1 MGP_LPJ_G0016720.1 mouse_genomes_project 1 180240105 180241096 + MGP_LPJ_P0023560 Olfr418 protein_coding protein_coding MGP_LPJ_T0021553.1 MGP_LPJ_G0016294.1 mouse_genomes_project 1 110357268 110381551 + MGP_LPJ_P0021553 Serpinb12 protein_coding protein_coding MGP_LPJ_T0021554.1 MGP_LPJ_G0016294.1 mouse_genomes_project 1 110361764 110381551 + MGP_LPJ_P0021554 Serpinb12 protein_coding protein_coding MGP_LPJ_T0021555.1 MGP_LPJ_G0016294.1 mouse_genomes_project 1 110361766 110374929 + Serpinb12 protein_coding retained_intron MGP_LPJ_T0006084.1 MGP_LPJ_G0005093.1 mouse_genomes_project 1 202511192 202521765 - 4930503O07Rik lincRNA lincRNA MGP_LPJ_T0100001.1 MGP_LPJ_G0038264.1 mouse_genomes_project 1 99761888 99762016 + Gm26078 snoRNA snoRNA MGP_LPJ_T0005995.1 MGP_LPJ_G0005024.1 mouse_genomes_project 1 171252165 171258996 - Gm36945 lincRNA lincRNA MGP_LPJ_T0005996.1 MGP_LPJ_G0005024.1 mouse_genomes_project 1 171252342 171259024 - Gm36945 lincRNA lincRNA MGP_LPJ_T0011866.1 MGP_LPJ_G0009957.1 mouse_genomes_project 1 1947027 1947658 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006005.1 MGP_LPJ_G0005031.1 mouse_genomes_project 1 172986081 172988120 - Gm15853 lincRNA lincRNA MGP_LPJ_T0019435.1 MGP_LPJ_G0015875.1 mouse_genomes_project 1 38759592 38815895 - MGP_LPJ_P0019435 Rfx8 protein_coding protein_coding MGP_LPJ_T0019436.1 MGP_LPJ_G0015875.1 mouse_genomes_project 1 38775268 38786451 - Rfx8 protein_coding processed_transcript MGP_LPJ_T0100034.1 MGP_LPJ_G0038297.1 mouse_genomes_project 1 167377591 167377652 + Gm23212 snoRNA snoRNA MGP_LPJ_T0023218.1 MGP_LPJ_G0016637.1 mouse_genomes_project 1 176357321 176399423 + MGP_LPJ_P0023218 Rgs5 protein_coding protein_coding MGP_LPJ_T0023219.1 MGP_LPJ_G0016637.1 mouse_genomes_project 1 176357342 176385762 + MGP_LPJ_P0023219 Rgs5 protein_coding protein_coding MGP_LPJ_T0019437.1 MGP_LPJ_G0015876.1 mouse_genomes_project 1 38904448 38905633 - MGP_LPJ_P0019437 Gm3646 protein_coding protein_coding MGP_LPJ_T0000492.1 MGP_LPJ_G0000427.1 mouse_genomes_project 1 39206901 39209972 + TEC TEC MGP_LPJ_T0000521.1 MGP_LPJ_G0000456.1 mouse_genomes_project 1 61549407 61550837 - TEC TEC MGP_LPJ_T0002961.1 MGP_LPJ_G0002783.1 mouse_genomes_project 1 171345386 171356717 - Gm32569 antisense antisense MGP_LPJ_T0002962.1 MGP_LPJ_G0002783.1 mouse_genomes_project 1 171345512 171441981 - Gm32569 antisense antisense MGP_LPJ_T0023549.1 MGP_LPJ_G0016712.1 mouse_genomes_project 1 179654165 179656694 + MGP_LPJ_P0023549 Crp protein_coding protein_coding MGP_LPJ_T0023550.1 MGP_LPJ_G0016712.1 mouse_genomes_project 1 179654166 179783126 + Crp protein_coding processed_transcript MGP_LPJ_T0005878.1 MGP_LPJ_G0004931.1 mouse_genomes_project 1 104345979 104366191 + Gm20268 lincRNA lincRNA MGP_LPJ_T0022110.1 MGP_LPJ_G0016417.1 mouse_genomes_project 1 139029593 139066284 + MGP_LPJ_P0022110 Chit1 protein_coding protein_coding MGP_LPJ_T0022111.1 MGP_LPJ_G0016417.1 mouse_genomes_project 1 139029593 139066284 + MGP_LPJ_P0022111 Chit1 protein_coding protein_coding MGP_LPJ_T0022112.1 MGP_LPJ_G0016417.1 mouse_genomes_project 1 139053430 139066283 + MGP_LPJ_P0022112 Chit1 protein_coding protein_coding MGP_LPJ_T0023496.1 MGP_LPJ_G0016698.1 mouse_genomes_project 1 179175331 179212740 - MGP_LPJ_P0023496 Atp1a4 protein_coding protein_coding MGP_LPJ_T0023497.1 MGP_LPJ_G0016698.1 mouse_genomes_project 1 179201234 179208270 - Atp1a4 protein_coding processed_transcript MGP_LPJ_T0023655.1 MGP_LPJ_G0016760.1 mouse_genomes_project 1 183254999 183599726 - MGP_LPJ_P0023655 Pld5 protein_coding protein_coding MGP_LPJ_T0023656.1 MGP_LPJ_G0016760.1 mouse_genomes_project 1 183255100 183599740 - MGP_LPJ_P0023656 Pld5 protein_coding nonsense_mediated_decay MGP_LPJ_T0023657.1 MGP_LPJ_G0016760.1 mouse_genomes_project 1 183256239 183535766 - MGP_LPJ_P0023657 Pld5 protein_coding protein_coding MGP_LPJ_T0023658.1 MGP_LPJ_G0016760.1 mouse_genomes_project 1 183289138 183599703 - Pld5 protein_coding retained_intron MGP_LPJ_T0023659.1 MGP_LPJ_G0016760.1 mouse_genomes_project 1 183345758 183535665 - Pld5 protein_coding retained_intron MGP_LPJ_T0023660.1 MGP_LPJ_G0016760.1 mouse_genomes_project 1 183585186 183599702 - MGP_LPJ_P0023660 Pld5 protein_coding protein_coding MGP_LPJ_T0009494.1 MGP_LPJ_G0007612.1 mouse_genomes_project 1 32839640 32839713 + Mir6896 miRNA miRNA MGP_LPJ_T0023606.1 MGP_LPJ_G0016748.1 mouse_genomes_project 1 181646673 181654047 + MGP_LPJ_P0023606 Olfr414 protein_coding protein_coding MGP_LPJ_T0023607.1 MGP_LPJ_G0016748.1 mouse_genomes_project 1 181652925 181653880 + MGP_LPJ_P0023607 Olfr414 protein_coding protein_coding MGP_LPJ_T0002868.1 MGP_LPJ_G0002710.1 mouse_genomes_project 1 84439743 84442580 - antisense antisense MGP_LPJ_T0024076.1 MGP_LPJ_G0016844.1 mouse_genomes_project 1 197732473 197782503 - MGP_LPJ_P0024076 Cenpf protein_coding protein_coding MGP_LPJ_T0024077.1 MGP_LPJ_G0016844.1 mouse_genomes_project 1 197734561 197740722 - MGP_LPJ_P0024077 Cenpf protein_coding protein_coding MGP_LPJ_T0024078.1 MGP_LPJ_G0016844.1 mouse_genomes_project 1 197751642 197782503 - MGP_LPJ_P0024078 Cenpf protein_coding protein_coding MGP_LPJ_T0024079.1 MGP_LPJ_G0016844.1 mouse_genomes_project 1 197762168 197765557 - Cenpf protein_coding retained_intron MGP_LPJ_T0024080.1 MGP_LPJ_G0016844.1 mouse_genomes_project 1 197778240 197782452 - MGP_LPJ_P0024080 Cenpf protein_coding nonsense_mediated_decay MGP_LPJ_T0024081.1 MGP_LPJ_G0016844.1 mouse_genomes_project 1 197781476 197782503 - Cenpf protein_coding retained_intron MGP_LPJ_T0011864.1 MGP_LPJ_G0009955.1 mouse_genomes_project 1 1894930 1896407 - processed_pseudogene processed_pseudogene MGP_LPJ_T0021302.1 MGP_LPJ_G0016242.1 mouse_genomes_project 1 95618970 95648237 + MGP_LPJ_P0021302 Gpc1 protein_coding protein_coding MGP_LPJ_T0021303.1 MGP_LPJ_G0016242.1 mouse_genomes_project 1 95619294 95623003 + Gpc1 protein_coding processed_transcript MGP_LPJ_T0021304.1 MGP_LPJ_G0016242.1 mouse_genomes_project 1 95640635 95643406 + Gpc1 protein_coding retained_intron MGP_LPJ_T0021305.1 MGP_LPJ_G0016242.1 mouse_genomes_project 1 95643999 95644980 + Gpc1 protein_coding retained_intron MGP_LPJ_T0021306.1 MGP_LPJ_G0016242.1 mouse_genomes_project 1 95644205 95645053 + Gpc1 protein_coding retained_intron MGP_LPJ_T0020335.1 MGP_LPJ_G0016047.1 mouse_genomes_project 1 73993990 74111369 - MGP_LPJ_P0020335 March4 protein_coding protein_coding MGP_LPJ_T0021051.1 MGP_LPJ_G0016183.1 mouse_genomes_project 1 89930980 90012832 + MGP_LPJ_P0021051 Neu2 protein_coding protein_coding MGP_LPJ_T0021052.1 MGP_LPJ_G0016183.1 mouse_genomes_project 1 89991255 90014000 + MGP_LPJ_P0021052 Neu2 protein_coding protein_coding MGP_LPJ_T0021053.1 MGP_LPJ_G0016183.1 mouse_genomes_project 1 89991255 90013983 + MGP_LPJ_P0021053 Neu2 protein_coding protein_coding MGP_LPJ_T0021054.1 MGP_LPJ_G0016183.1 mouse_genomes_project 1 89991274 90012727 + MGP_LPJ_P0021054 Neu2 protein_coding protein_coding MGP_LPJ_T0021055.1 MGP_LPJ_G0016183.1 mouse_genomes_project 1 90000424 90014007 + MGP_LPJ_P0021055 Neu2 protein_coding protein_coding MGP_LPJ_T0021056.1 MGP_LPJ_G0016183.1 mouse_genomes_project 1 90010713 90013983 + MGP_LPJ_P0021056 Neu2 protein_coding protein_coding MGP_LPJ_T0021057.1 MGP_LPJ_G0016183.1 mouse_genomes_project 1 90010713 90013989 + MGP_LPJ_P0021057 Neu2 protein_coding protein_coding MGP_LPJ_T0000507.1 MGP_LPJ_G0000442.1 mouse_genomes_project 1 55022880 55024541 - TEC TEC MGP_LPJ_T0023924.1 MGP_LPJ_G0016813.1 mouse_genomes_project 1 190598150 190600205 - MGP_LPJ_P0023924 Ccdc185 protein_coding protein_coding MGP_LPJ_T0012354.1 MGP_LPJ_G0010445.1 mouse_genomes_project 1 191112095 191128178 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012016.1 MGP_LPJ_G0010107.1 mouse_genomes_project 1 48083855 48084841 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000678.1 MGP_LPJ_G0000612.1 mouse_genomes_project 1 141084176 141086429 + TEC TEC MGP_LPJ_T0002839.1 MGP_LPJ_G0002691.1 mouse_genomes_project 1 60400212 60416920 - Gm28411 antisense antisense MGP_LPJ_T0002841.1 MGP_LPJ_G0002691.1 mouse_genomes_project 1 60410376 60417653 - Gm28411 antisense antisense MGP_LPJ_T0000650.1 MGP_LPJ_G0000585.1 mouse_genomes_project 1 132721385 132724135 + TEC TEC MGP_LPJ_T0005752.1 MGP_LPJ_G0004831.1 mouse_genomes_project 1 51677126 51678703 - Gm28055 lincRNA lincRNA MGP_LPJ_T0005753.1 MGP_LPJ_G0004831.1 mouse_genomes_project 1 51677927 51724208 - Gm28055 lincRNA lincRNA MGP_LPJ_T0005683.1 MGP_LPJ_G0004782.1 mouse_genomes_project 1 18686905 18689925 + Gm28065 lincRNA lincRNA MGP_LPJ_T0100019.1 MGP_LPJ_G0038282.1 mouse_genomes_project 1 139448613 139448739 + Gm25612 snoRNA snoRNA MGP_LPJ_T0023616.1 MGP_LPJ_G0016751.1 mouse_genomes_project 1 182091363 182182513 - MGP_LPJ_P0023616 Grem2 protein_coding protein_coding MGP_LPJ_T0021572.1 MGP_LPJ_G0016303.1 mouse_genomes_project 1 111122151 111141749 + MGP_LPJ_P0021572 Serpinb8 protein_coding protein_coding MGP_LPJ_T0021573.1 MGP_LPJ_G0016303.1 mouse_genomes_project 1 111122151 111143253 + MGP_LPJ_P0021573 Serpinb8 protein_coding protein_coding MGP_LPJ_T0021574.1 MGP_LPJ_G0016303.1 mouse_genomes_project 1 111122191 111138761 + Serpinb8 protein_coding retained_intron MGP_LPJ_T0021575.1 MGP_LPJ_G0016303.1 mouse_genomes_project 1 111138490 111139939 + MGP_LPJ_P0021575 Serpinb8 protein_coding protein_coding MGP_LPJ_T0012036.1 MGP_LPJ_G0010127.1 mouse_genomes_project 1 52859406 52860268 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011271.1 MGP_LPJ_G0009389.1 mouse_genomes_project 1 135829606 135829959 - Gm25717 misc_RNA misc_RNA MGP_LPJ_T0018860.1 MGP_LPJ_G0015756.1 mouse_genomes_project 1 10663890 10679964 - MGP_LPJ_P0018860 Prdm14 protein_coding protein_coding MGP_LPJ_T0099998.1 MGP_LPJ_G0038261.1 mouse_genomes_project 1 88714612 88714682 - Snord82 snoRNA snoRNA MGP_LPJ_T0002976.1 MGP_LPJ_G0002795.1 mouse_genomes_project 1 179162519 179163179 + Gm17224 antisense antisense MGP_LPJ_T0002987.1 MGP_LPJ_G0002805.1 mouse_genomes_project 1 188452270 188465212 - Gm37768 antisense antisense MGP_LPJ_T0000742.1 MGP_LPJ_G0000675.1 mouse_genomes_project 1 165865227 165867464 + TEC TEC MGP_LPJ_T0011261.1 MGP_LPJ_G0009379.1 mouse_genomes_project 1 50472420 50472734 + Gm25843 misc_RNA misc_RNA MGP_LPJ_T0098799.1 MGP_LPJ_G0037062.1 mouse_genomes_project 1 177901177 177901341 + Gm26110 snRNA snRNA MGP_LPJ_T0005822.1 MGP_LPJ_G0004882.1 mouse_genomes_project 1 79319043 79320893 + Gm28386 lincRNA lincRNA MGP_LPJ_T0024172.1 MGP_LPJ_G0016864.1 mouse_genomes_project 1 200086203 200097683 + MGP_LPJ_P0024172 Nek2 protein_coding protein_coding MGP_LPJ_T0024173.1 MGP_LPJ_G0016864.1 mouse_genomes_project 1 200086269 200093099 + Nek2 protein_coding retained_intron MGP_LPJ_T0024174.1 MGP_LPJ_G0016864.1 mouse_genomes_project 1 200086941 200090630 + Nek2 protein_coding retained_intron MGP_LPJ_T0024175.1 MGP_LPJ_G0016864.1 mouse_genomes_project 1 200091952 200094795 + Nek2 protein_coding processed_transcript MGP_LPJ_T0022301.1 MGP_LPJ_G0016457.1 mouse_genomes_project 1 141248805 141269563 - MGP_LPJ_P0022301 5730559C18Rik protein_coding protein_coding MGP_LPJ_T0022302.1 MGP_LPJ_G0016457.1 mouse_genomes_project 1 141255548 141265560 - MGP_LPJ_P0022302 5730559C18Rik protein_coding protein_coding MGP_LPJ_T0022303.1 MGP_LPJ_G0016457.1 mouse_genomes_project 1 141255586 141265581 - MGP_LPJ_P0022303 5730559C18Rik protein_coding protein_coding MGP_LPJ_T0022304.1 MGP_LPJ_G0016457.1 mouse_genomes_project 1 141258833 141262933 - 5730559C18Rik protein_coding retained_intron MGP_LPJ_T0022305.1 MGP_LPJ_G0016457.1 mouse_genomes_project 1 141261463 141269418 - MGP_LPJ_P0022305 5730559C18Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0022306.1 MGP_LPJ_G0016457.1 mouse_genomes_project 1 141261484 141265290 - MGP_LPJ_P0022306 5730559C18Rik protein_coding protein_coding MGP_LPJ_T0006011.1 MGP_LPJ_G0005036.1 mouse_genomes_project 1 176922843 176923988 + Gm37748 lincRNA lincRNA MGP_LPJ_T0006004.1 MGP_LPJ_G0005030.1 mouse_genomes_project 1 172691840 172692001 + Gm37923 lincRNA lincRNA MGP_LPJ_T0023272.1 MGP_LPJ_G0016654.1 mouse_genomes_project 1 177787820 177798621 - MGP_LPJ_P0023272 Fcrla protein_coding protein_coding MGP_LPJ_T0023273.1 MGP_LPJ_G0016654.1 mouse_genomes_project 1 177788119 177792093 - MGP_LPJ_P0023273 Fcrla protein_coding nonsense_mediated_decay MGP_LPJ_T0023274.1 MGP_LPJ_G0016654.1 mouse_genomes_project 1 177788126 177798621 - MGP_LPJ_P0023274 Fcrla protein_coding protein_coding MGP_LPJ_T0023275.1 MGP_LPJ_G0016654.1 mouse_genomes_project 1 177790608 177798593 - MGP_LPJ_P0023275 Fcrla protein_coding protein_coding MGP_LPJ_T0023276.1 MGP_LPJ_G0016654.1 mouse_genomes_project 1 177791321 177798598 - MGP_LPJ_P0023276 Fcrla protein_coding protein_coding MGP_LPJ_T0023277.1 MGP_LPJ_G0016654.1 mouse_genomes_project 1 177791341 177798572 - Fcrla protein_coding processed_transcript MGP_LPJ_T0021980.1 MGP_LPJ_G0016389.1 mouse_genomes_project 1 137100700 137119437 + MGP_LPJ_P0021980 Nuak2 protein_coding protein_coding MGP_LPJ_T0021981.1 MGP_LPJ_G0016389.1 mouse_genomes_project 1 137100700 137119633 + MGP_LPJ_P0021981 Nuak2 protein_coding protein_coding MGP_LPJ_T0021982.1 MGP_LPJ_G0016389.1 mouse_genomes_project 1 137100739 137102311 + Nuak2 protein_coding processed_transcript MGP_LPJ_T0021983.1 MGP_LPJ_G0016389.1 mouse_genomes_project 1 137113949 137116594 + Nuak2 protein_coding retained_intron MGP_LPJ_T0005979.1 MGP_LPJ_G0005011.1 mouse_genomes_project 1 166325596 166328227 - Gm37294 lincRNA lincRNA MGP_LPJ_T0000721.1 MGP_LPJ_G0000654.1 mouse_genomes_project 1 159681632 159683552 + TEC TEC MGP_LPJ_T0101706.1 MGP_LPJ_G0039744.1 mouse_genomes_project 1 105668543 105757958 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0012109.1 MGP_LPJ_G0010200.1 mouse_genomes_project 1 80867086 80867471 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023601.1 MGP_LPJ_G0016744.1 mouse_genomes_project 1 181354571 181443007 + MGP_LPJ_P0023601 Spta1 protein_coding protein_coding MGP_LPJ_T0023602.1 MGP_LPJ_G0016744.1 mouse_genomes_project 1 181405544 181442115 + Spta1 protein_coding retained_intron MGP_LPJ_T0020278.1 MGP_LPJ_G0016036.1 mouse_genomes_project 1 70958031 71116520 - MGP_LPJ_P0020278 Ikzf2 protein_coding protein_coding MGP_LPJ_T0020279.1 MGP_LPJ_G0016036.1 mouse_genomes_project 1 70958576 71117869 - MGP_LPJ_P0020279 Ikzf2 protein_coding protein_coding MGP_LPJ_T0020280.1 MGP_LPJ_G0016036.1 mouse_genomes_project 1 70958762 71117904 - MGP_LPJ_P0020280 Ikzf2 protein_coding unknown_likely_coding MGP_LPJ_T0020281.1 MGP_LPJ_G0016036.1 mouse_genomes_project 1 70958762 71114789 - MGP_LPJ_P0020281 Ikzf2 protein_coding protein_coding MGP_LPJ_T0020282.1 MGP_LPJ_G0016036.1 mouse_genomes_project 1 70958762 71114789 - MGP_LPJ_P0020282 Ikzf2 protein_coding protein_coding MGP_LPJ_T0020283.1 MGP_LPJ_G0016036.1 mouse_genomes_project 1 70958762 71114789 - MGP_LPJ_P0020283 Ikzf2 protein_coding protein_coding MGP_LPJ_T0020284.1 MGP_LPJ_G0016036.1 mouse_genomes_project 1 70998969 71115934 - MGP_LPJ_P0020284 Ikzf2 protein_coding protein_coding MGP_LPJ_T0020285.1 MGP_LPJ_G0016036.1 mouse_genomes_project 1 71112189 71115168 - Ikzf2 protein_coding retained_intron MGP_LPJ_T0020286.1 MGP_LPJ_G0016036.1 mouse_genomes_project 1 71112190 71117764 - Ikzf2 protein_coding retained_intron MGP_LPJ_T0098779.1 MGP_LPJ_G0037042.1 mouse_genomes_project 1 135298305 135298412 - Gm23623 snRNA snRNA MGP_LPJ_T0000458.1 MGP_LPJ_G0000394.1 mouse_genomes_project 1 23938821 23939151 - TEC TEC MGP_LPJ_T0011886.1 MGP_LPJ_G0009977.1 mouse_genomes_project 1 5041630 5042509 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012157.1 MGP_LPJ_G0010248.1 mouse_genomes_project 1 103838771 103839438 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009573.1 MGP_LPJ_G0007691.1 mouse_genomes_project 1 188286770 188286837 + Mir6904 miRNA miRNA MGP_LPJ_T0020679.1 MGP_LPJ_G0016106.1 mouse_genomes_project 1 77184662 77190836 + MGP_LPJ_P0020679 Tmem198 protein_coding protein_coding MGP_LPJ_T0020680.1 MGP_LPJ_G0016106.1 mouse_genomes_project 1 77184706 77187758 + MGP_LPJ_P0020680 Tmem198 protein_coding protein_coding MGP_LPJ_T0020681.1 MGP_LPJ_G0016106.1 mouse_genomes_project 1 77184710 77190848 + MGP_LPJ_P0020681 Tmem198 protein_coding protein_coding MGP_LPJ_T0020682.1 MGP_LPJ_G0016106.1 mouse_genomes_project 1 77184834 77187821 + MGP_LPJ_P0020682 Tmem198 protein_coding protein_coding MGP_LPJ_T0012175.1 MGP_LPJ_G0010266.1 mouse_genomes_project 1 110644932 110757951 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012067.1 MGP_LPJ_G0010158.1 mouse_genomes_project 1 62964103 62964381 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012042.1 MGP_LPJ_G0010133.1 mouse_genomes_project 1 55673716 55675497 + processed_pseudogene processed_pseudogene MGP_LPJ_T0020090.1 MGP_LPJ_G0015999.1 mouse_genomes_project 1 63970731 64107226 - MGP_LPJ_P0020090 Ino80d protein_coding nonsense_mediated_decay MGP_LPJ_T0020091.1 MGP_LPJ_G0015999.1 mouse_genomes_project 1 64066466 64134976 - MGP_LPJ_P0020091 Ino80d protein_coding protein_coding MGP_LPJ_T0020092.1 MGP_LPJ_G0015999.1 mouse_genomes_project 1 64073885 64077312 - Ino80d protein_coding retained_intron MGP_LPJ_T0020093.1 MGP_LPJ_G0015999.1 mouse_genomes_project 1 64075900 64135064 - MGP_LPJ_P0020093 Ino80d protein_coding protein_coding MGP_LPJ_T0020094.1 MGP_LPJ_G0015999.1 mouse_genomes_project 1 64075914 64135006 - MGP_LPJ_P0020094 Ino80d protein_coding protein_coding MGP_LPJ_T0098787.1 MGP_LPJ_G0037050.1 mouse_genomes_project 1 146641202 146641309 + Gm25457 snRNA snRNA MGP_LPJ_T0023595.1 MGP_LPJ_G0016739.1 mouse_genomes_project 1 181214712 181220327 + MGP_LPJ_P0023595 Olfr429 protein_coding protein_coding MGP_LPJ_T0023596.1 MGP_LPJ_G0016739.1 mouse_genomes_project 1 181219384 181220327 + MGP_LPJ_P0023596 Olfr429 protein_coding protein_coding MGP_LPJ_T0099952.1 MGP_LPJ_G0038215.1 mouse_genomes_project 1 4578651 4578781 + Gm23274 snoRNA snoRNA MGP_LPJ_T0012322.1 MGP_LPJ_G0010413.1 mouse_genomes_project 1 173396729 173397041 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011977.1 MGP_LPJ_G0010068.1 mouse_genomes_project 1 33775094 33775539 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000810.1 MGP_LPJ_G0000741.1 mouse_genomes_project 1 190318693 190322835 + TEC TEC MGP_LPJ_T0016947.1 MGP_LPJ_G0015018.1 mouse_genomes_project 1 84728586 84761728 - C430014B12Rik processed_transcript antisense MGP_LPJ_T0016948.1 MGP_LPJ_G0015018.1 mouse_genomes_project 1 84755520 84761780 - C430014B12Rik processed_transcript antisense MGP_LPJ_T0016949.1 MGP_LPJ_G0015018.1 mouse_genomes_project 1 84757380 84761758 - C430014B12Rik processed_transcript retained_intron MGP_LPJ_T0000450.1 MGP_LPJ_G0000386.1 mouse_genomes_project 1 23784653 23790860 - TEC TEC MGP_LPJ_T0005710.1 MGP_LPJ_G0004806.1 mouse_genomes_project 1 35666044 35671735 - Gm33533 lincRNA lincRNA MGP_LPJ_T0002919.1 MGP_LPJ_G0002748.1 mouse_genomes_project 1 139799585 139811859 + Gm28892 antisense antisense MGP_LPJ_T0023250.1 MGP_LPJ_G0016646.1 mouse_genomes_project 1 177113791 177121873 - MGP_LPJ_P0023250 Gm7694 protein_coding protein_coding MGP_LPJ_T0016990.1 MGP_LPJ_G0015032.1 mouse_genomes_project 1 155712524 155742339 - Ptgs2os processed_transcript antisense MGP_LPJ_T0016991.1 MGP_LPJ_G0015032.1 mouse_genomes_project 1 155740702 155742485 - Ptgs2os processed_transcript retained_intron MGP_LPJ_T0005790.1 MGP_LPJ_G0004860.1 mouse_genomes_project 1 68508624 68593922 + Gm15668 lincRNA lincRNA MGP_LPJ_T0011887.1 MGP_LPJ_G0009978.1 mouse_genomes_project 1 5113293 5115308 - processed_pseudogene processed_pseudogene MGP_LPJ_T0019952.1 MGP_LPJ_G0015976.1 mouse_genomes_project 1 59881684 59925953 - MGP_LPJ_P0019952 Als2cr11 protein_coding protein_coding MGP_LPJ_T0019953.1 MGP_LPJ_G0015976.1 mouse_genomes_project 1 59900793 59915712 - Als2cr11 protein_coding processed_transcript MGP_LPJ_T0006059.1 MGP_LPJ_G0005072.1 mouse_genomes_project 1 193239416 193246186 - lincRNA lincRNA MGP_LPJ_T0012138.1 MGP_LPJ_G0010229.1 mouse_genomes_project 1 93865427 93866147 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005762.1 MGP_LPJ_G0004838.1 mouse_genomes_project 1 57898720 57913638 - BC055402 lincRNA lincRNA MGP_LPJ_T0011956.1 MGP_LPJ_G0010047.1 mouse_genomes_project 1 30074781 30076642 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000630.1 MGP_LPJ_G0000565.1 mouse_genomes_project 1 126772230 126774425 + TEC TEC MGP_LPJ_T0019276.1 MGP_LPJ_G0015845.1 mouse_genomes_project 1 35617880 35629592 - MGP_LPJ_P0019276 Actr1b protein_coding protein_coding MGP_LPJ_T0019277.1 MGP_LPJ_G0015845.1 mouse_genomes_project 1 35621264 35629531 - Actr1b protein_coding retained_intron MGP_LPJ_T0019278.1 MGP_LPJ_G0015845.1 mouse_genomes_project 1 35621346 35629262 - MGP_LPJ_P0019278 Actr1b protein_coding protein_coding MGP_LPJ_T0019279.1 MGP_LPJ_G0015845.1 mouse_genomes_project 1 35621367 35637680 - MGP_LPJ_P0019279 Actr1b protein_coding protein_coding MGP_LPJ_T0019280.1 MGP_LPJ_G0015845.1 mouse_genomes_project 1 35622065 35626751 - Actr1b protein_coding retained_intron MGP_LPJ_T0019281.1 MGP_LPJ_G0015845.1 mouse_genomes_project 1 35626131 35629503 - Actr1b protein_coding processed_transcript MGP_LPJ_T0022845.1 MGP_LPJ_G0016558.1 mouse_genomes_project 1 166369987 166444118 - MGP_LPJ_P0022845 Tnn protein_coding protein_coding MGP_LPJ_T0022846.1 MGP_LPJ_G0016558.1 mouse_genomes_project 1 166370930 166438426 - MGP_LPJ_P0022846 Tnn protein_coding protein_coding MGP_LPJ_T0005711.1 MGP_LPJ_G0004807.1 mouse_genomes_project 1 37143312 37172469 + Gm5099 lincRNA lincRNA MGP_LPJ_T0020383.1 MGP_LPJ_G0016059.1 mouse_genomes_project 1 75967639 75968714 + MGP_LPJ_P0020383 Gpbar1 protein_coding protein_coding MGP_LPJ_T0022464.1 MGP_LPJ_G0016493.1 mouse_genomes_project 1 156036703 156073667 - MGP_LPJ_P0022464 BC003331 protein_coding protein_coding MGP_LPJ_T0022465.1 MGP_LPJ_G0016493.1 mouse_genomes_project 1 156036711 156073642 - MGP_LPJ_P0022465 BC003331 protein_coding protein_coding MGP_LPJ_T0022466.1 MGP_LPJ_G0016493.1 mouse_genomes_project 1 156036711 156073349 - MGP_LPJ_P0022466 BC003331 protein_coding protein_coding MGP_LPJ_T0022467.1 MGP_LPJ_G0016493.1 mouse_genomes_project 1 156037920 156073306 - MGP_LPJ_P0022467 BC003331 protein_coding protein_coding MGP_LPJ_T0022468.1 MGP_LPJ_G0016493.1 mouse_genomes_project 1 156037926 156073330 - MGP_LPJ_P0022468 BC003331 protein_coding nonsense_mediated_decay MGP_LPJ_T0022469.1 MGP_LPJ_G0016493.1 mouse_genomes_project 1 156051641 156059563 - BC003331 protein_coding retained_intron MGP_LPJ_T0022470.1 MGP_LPJ_G0016493.1 mouse_genomes_project 1 156052365 156073524 - BC003331 protein_coding processed_transcript MGP_LPJ_T0022471.1 MGP_LPJ_G0016493.1 mouse_genomes_project 1 156061364 156073335 - BC003331 protein_coding retained_intron MGP_LPJ_T0022472.1 MGP_LPJ_G0016493.1 mouse_genomes_project 1 156067354 156073334 - BC003331 protein_coding retained_intron MGP_LPJ_T0098721.1 MGP_LPJ_G0036984.1 mouse_genomes_project 1 974329 974387 - Gm27396 snRNA snRNA MGP_LPJ_T0098390.1 MGP_LPJ_G0036671.1 mouse_genomes_project 1 131885478 131885608 + Gm23370 scaRNA scaRNA MGP_LPJ_T0012323.1 MGP_LPJ_G0010414.1 mouse_genomes_project 1 173813793 173814202 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005713.1 MGP_LPJ_G0004809.1 mouse_genomes_project 1 38944304 38950816 - 1700066B17Rik lincRNA lincRNA MGP_LPJ_T0005714.1 MGP_LPJ_G0004809.1 mouse_genomes_project 1 38947566 38952447 - 1700066B17Rik lincRNA lincRNA MGP_LPJ_T0005715.1 MGP_LPJ_G0004809.1 mouse_genomes_project 1 38947571 38952451 - 1700066B17Rik lincRNA lincRNA MGP_LPJ_T0005947.1 MGP_LPJ_G0004986.1 mouse_genomes_project 1 143305386 143309888 - lincRNA lincRNA MGP_LPJ_T0002904.1 MGP_LPJ_G0002739.1 mouse_genomes_project 1 135524407 135538507 - Gm15848 antisense antisense MGP_LPJ_T0002905.1 MGP_LPJ_G0002739.1 mouse_genomes_project 1 135524633 135535097 - Gm15848 antisense antisense MGP_LPJ_T0002906.1 MGP_LPJ_G0002739.1 mouse_genomes_project 1 135531823 135535127 - Gm15848 antisense antisense MGP_LPJ_T0020983.1 MGP_LPJ_G0016169.1 mouse_genomes_project 1 89095337 89147301 + Dis3l2 protein_coding processed_transcript MGP_LPJ_T0020984.1 MGP_LPJ_G0016169.1 mouse_genomes_project 1 89095348 89453911 + MGP_LPJ_P0020984 Dis3l2 protein_coding protein_coding MGP_LPJ_T0020985.1 MGP_LPJ_G0016169.1 mouse_genomes_project 1 89095357 89283866 + Dis3l2 protein_coding retained_intron MGP_LPJ_T0020986.1 MGP_LPJ_G0016169.1 mouse_genomes_project 1 89095357 89453011 + MGP_LPJ_P0020986 Dis3l2 protein_coding nonsense_mediated_decay MGP_LPJ_T0020987.1 MGP_LPJ_G0016169.1 mouse_genomes_project 1 89095372 89453908 + MGP_LPJ_P0020987 Dis3l2 protein_coding protein_coding MGP_LPJ_T0020988.1 MGP_LPJ_G0016169.1 mouse_genomes_project 1 89258090 89258825 + Dis3l2 protein_coding retained_intron MGP_LPJ_T0022558.1 MGP_LPJ_G0016508.1 mouse_genomes_project 1 158649232 158660559 + MGP_LPJ_P0022558 Arpc5 protein_coding protein_coding MGP_LPJ_T0022559.1 MGP_LPJ_G0016508.1 mouse_genomes_project 1 158649232 158660559 + MGP_LPJ_P0022559 Arpc5 protein_coding protein_coding MGP_LPJ_T0022560.1 MGP_LPJ_G0016508.1 mouse_genomes_project 1 158651175 158659356 + Arpc5 protein_coding retained_intron MGP_LPJ_T0023558.1 MGP_LPJ_G0016719.1 mouse_genomes_project 1 180180427 180186354 - MGP_LPJ_P0023558 Fcer1a protein_coding protein_coding MGP_LPJ_T0023559.1 MGP_LPJ_G0016719.1 mouse_genomes_project 1 180180536 180186334 - MGP_LPJ_P0023559 Fcer1a protein_coding protein_coding MGP_LPJ_T0023685.1 MGP_LPJ_G0016764.1 mouse_genomes_project 1 184809454 184813335 + MGP_LPJ_P0023685 Zbtb18 protein_coding protein_coding MGP_LPJ_T0023686.1 MGP_LPJ_G0016764.1 mouse_genomes_project 1 184809462 184813384 + MGP_LPJ_P0023686 Zbtb18 protein_coding protein_coding MGP_LPJ_T0023687.1 MGP_LPJ_G0016764.1 mouse_genomes_project 1 184810887 184814027 + MGP_LPJ_P0023687 Zbtb18 protein_coding protein_coding MGP_LPJ_T0023688.1 MGP_LPJ_G0016764.1 mouse_genomes_project 1 184810899 184813825 + MGP_LPJ_P0023688 Zbtb18 protein_coding protein_coding MGP_LPJ_T0023689.1 MGP_LPJ_G0016764.1 mouse_genomes_project 1 184810975 184813757 + MGP_LPJ_P0023689 Zbtb18 protein_coding protein_coding MGP_LPJ_T0023690.1 MGP_LPJ_G0016764.1 mouse_genomes_project 1 184811869 184812744 + Zbtb18 protein_coding processed_transcript MGP_LPJ_T0023691.1 MGP_LPJ_G0016764.1 mouse_genomes_project 1 184812059 184816975 + MGP_LPJ_P0023691 Zbtb18 protein_coding protein_coding MGP_LPJ_T0018838.1 MGP_LPJ_G0015753.1 mouse_genomes_project 1 8932058 9125846 + MGP_LPJ_P0018838 A830018L16Rik protein_coding protein_coding MGP_LPJ_T0018839.1 MGP_LPJ_G0015753.1 mouse_genomes_project 1 8932058 9472349 + MGP_LPJ_P0018839 A830018L16Rik protein_coding protein_coding MGP_LPJ_T0018840.1 MGP_LPJ_G0015753.1 mouse_genomes_project 1 8932065 9032032 + A830018L16Rik protein_coding processed_transcript MGP_LPJ_T0018841.1 MGP_LPJ_G0015753.1 mouse_genomes_project 1 8932065 9431594 + MGP_LPJ_P0018841 A830018L16Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0018842.1 MGP_LPJ_G0015753.1 mouse_genomes_project 1 8932222 9125656 + MGP_LPJ_P0018842 A830018L16Rik protein_coding protein_coding MGP_LPJ_T0018843.1 MGP_LPJ_G0015753.1 mouse_genomes_project 1 8932462 9471844 + MGP_LPJ_P0018843 A830018L16Rik protein_coding protein_coding MGP_LPJ_T0018844.1 MGP_LPJ_G0015753.1 mouse_genomes_project 1 8932462 9471844 + MGP_LPJ_P0018844 A830018L16Rik protein_coding protein_coding MGP_LPJ_T0018845.1 MGP_LPJ_G0015753.1 mouse_genomes_project 1 9031993 9123655 + MGP_LPJ_P0018845 A830018L16Rik protein_coding protein_coding MGP_LPJ_T0018846.1 MGP_LPJ_G0015753.1 mouse_genomes_project 1 9102406 9120332 + A830018L16Rik protein_coding processed_transcript MGP_LPJ_T0024082.1 MGP_LPJ_G0016845.1 mouse_genomes_project 1 197826287 197985778 + MGP_LPJ_P0024082 Ptpn14 protein_coding protein_coding MGP_LPJ_T0024083.1 MGP_LPJ_G0016845.1 mouse_genomes_project 1 197826294 197945458 + Ptpn14 protein_coding retained_intron MGP_LPJ_T0024084.1 MGP_LPJ_G0016845.1 mouse_genomes_project 1 197890194 197956825 + Ptpn14 protein_coding retained_intron MGP_LPJ_T0024085.1 MGP_LPJ_G0016845.1 mouse_genomes_project 1 197890230 197979151 + MGP_LPJ_P0024085 Ptpn14 protein_coding protein_coding MGP_LPJ_T0024086.1 MGP_LPJ_G0016845.1 mouse_genomes_project 1 197949891 197957312 + Ptpn14 protein_coding retained_intron MGP_LPJ_T0024087.1 MGP_LPJ_G0016845.1 mouse_genomes_project 1 197970545 197971320 + Ptpn14 protein_coding processed_transcript MGP_LPJ_T0023975.1 MGP_LPJ_G0016824.1 mouse_genomes_project 1 192571632 192577197 - MGP_LPJ_P0023975 Hlx protein_coding protein_coding MGP_LPJ_T0023976.1 MGP_LPJ_G0016824.1 mouse_genomes_project 1 192571639 192576129 - MGP_LPJ_P0023976 Hlx protein_coding protein_coding MGP_LPJ_T0018729.1 MGP_LPJ_G0015738.1 mouse_genomes_project 1 4403102 4489031 + MGP_LPJ_P0018729 Pcmtd1 protein_coding protein_coding MGP_LPJ_T0018730.1 MGP_LPJ_G0015738.1 mouse_genomes_project 1 4403161 4480066 + Pcmtd1 protein_coding processed_transcript MGP_LPJ_T0018731.1 MGP_LPJ_G0015738.1 mouse_genomes_project 1 4403223 4491271 + Pcmtd1 protein_coding processed_transcript MGP_LPJ_T0018732.1 MGP_LPJ_G0015738.1 mouse_genomes_project 1 4466796 4489225 + MGP_LPJ_P0018732 Pcmtd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0018733.1 MGP_LPJ_G0015738.1 mouse_genomes_project 1 4474030 4482535 + Pcmtd1 protein_coding retained_intron MGP_LPJ_T0018734.1 MGP_LPJ_G0015738.1 mouse_genomes_project 1 4479248 4491767 + Pcmtd1 protein_coding retained_intron MGP_LPJ_T0018735.1 MGP_LPJ_G0015738.1 mouse_genomes_project 1 4479720 4491808 + Pcmtd1 protein_coding retained_intron MGP_LPJ_T0098792.1 MGP_LPJ_G0037055.1 mouse_genomes_project 1 157680633 157680766 - Gm25279 snRNA snRNA MGP_LPJ_T0023798.1 MGP_LPJ_G0016784.1 mouse_genomes_project 1 188016920 188117908 + MGP_LPJ_P0023798 Itpkb protein_coding protein_coding MGP_LPJ_T0023799.1 MGP_LPJ_G0016784.1 mouse_genomes_project 1 188020301 188024894 + Itpkb protein_coding retained_intron MGP_LPJ_T0020271.1 MGP_LPJ_G0016035.1 mouse_genomes_project 1 69371659 70512875 - MGP_LPJ_P0020271 Erbb4 protein_coding protein_coding MGP_LPJ_T0020272.1 MGP_LPJ_G0016035.1 mouse_genomes_project 1 69371659 70513178 - MGP_LPJ_P0020272 Erbb4 protein_coding protein_coding MGP_LPJ_T0020273.1 MGP_LPJ_G0016035.1 mouse_genomes_project 1 69379522 70120796 - MGP_LPJ_P0020273 Erbb4 protein_coding unknown_likely_coding MGP_LPJ_T0020274.1 MGP_LPJ_G0016035.1 mouse_genomes_project 1 69379522 70120204 - MGP_LPJ_P0020274 Erbb4 protein_coding unknown_likely_coding MGP_LPJ_T0020275.1 MGP_LPJ_G0016035.1 mouse_genomes_project 1 69609129 70512875 - MGP_LPJ_P0020275 Erbb4 protein_coding protein_coding MGP_LPJ_T0020276.1 MGP_LPJ_G0016035.1 mouse_genomes_project 1 69644686 69652915 - Erbb4 protein_coding processed_transcript MGP_LPJ_T0020277.1 MGP_LPJ_G0016035.1 mouse_genomes_project 1 69652746 69685225 - Erbb4 protein_coding retained_intron MGP_LPJ_T0021130.1 MGP_LPJ_G0016201.1 mouse_genomes_project 1 90804937 90857211 + Trpm8 protein_coding processed_transcript MGP_LPJ_T0021131.1 MGP_LPJ_G0016201.1 mouse_genomes_project 1 90851877 90948362 + MGP_LPJ_P0021131 Trpm8 protein_coding protein_coding MGP_LPJ_T0021132.1 MGP_LPJ_G0016201.1 mouse_genomes_project 1 90855896 90948804 + MGP_LPJ_P0021132 Trpm8 protein_coding protein_coding MGP_LPJ_T0021133.1 MGP_LPJ_G0016201.1 mouse_genomes_project 1 90873102 90948362 + MGP_LPJ_P0021133 Trpm8 protein_coding protein_coding MGP_LPJ_T0021134.1 MGP_LPJ_G0016201.1 mouse_genomes_project 1 90873159 90944229 + MGP_LPJ_P0021134 Trpm8 protein_coding unknown_likely_coding MGP_LPJ_T0101235.1 MGP_LPJ_G0039487.1 mouse_genomes_project 1 190370339 190371273 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0101236.1 MGP_LPJ_G0039487.1 mouse_genomes_project 1 190370761 190381476 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0021112.1 MGP_LPJ_G0016193.1 mouse_genomes_project 1 90567899 90702028 + protein_coding retained_intron MGP_LPJ_T0021113.1 MGP_LPJ_G0016193.1 mouse_genomes_project 1 90567899 90703609 + MGP_LPJ_P0021113 protein_coding protein_coding MGP_LPJ_T0021114.1 MGP_LPJ_G0016193.1 mouse_genomes_project 1 90567965 90700328 + MGP_LPJ_P0021114 protein_coding protein_coding MGP_LPJ_T0021115.1 MGP_LPJ_G0016193.1 mouse_genomes_project 1 90571485 90703609 + MGP_LPJ_P0021115 protein_coding protein_coding MGP_LPJ_T0020213.1 MGP_LPJ_G0016027.1 mouse_genomes_project 1 67351885 67574281 + MGP_LPJ_P0020213 protein_coding protein_coding MGP_LPJ_T0020214.1 MGP_LPJ_G0016027.1 mouse_genomes_project 1 67351925 67643613 + MGP_LPJ_P0020214 protein_coding protein_coding MGP_LPJ_T0020215.1 MGP_LPJ_G0016027.1 mouse_genomes_project 1 67351928 67644171 + MGP_LPJ_P0020215 protein_coding protein_coding MGP_LPJ_T0020216.1 MGP_LPJ_G0016027.1 mouse_genomes_project 1 67352077 67515130 + protein_coding processed_transcript MGP_LPJ_T0020217.1 MGP_LPJ_G0016027.1 mouse_genomes_project 1 67352156 67377072 + protein_coding processed_transcript MGP_LPJ_T0020218.1 MGP_LPJ_G0016027.1 mouse_genomes_project 1 67439785 67644169 + MGP_LPJ_P0020218 protein_coding protein_coding MGP_LPJ_T0020219.1 MGP_LPJ_G0016027.1 mouse_genomes_project 1 67439800 67644169 + MGP_LPJ_P0020219 protein_coding protein_coding MGP_LPJ_T0020220.1 MGP_LPJ_G0016027.1 mouse_genomes_project 1 67514409 67640773 + MGP_LPJ_P0020220 protein_coding protein_coding MGP_LPJ_T0020221.1 MGP_LPJ_G0016027.1 mouse_genomes_project 1 67514526 67599879 + protein_coding retained_intron MGP_LPJ_T0020222.1 MGP_LPJ_G0016027.1 mouse_genomes_project 1 67514688 67574955 + protein_coding retained_intron MGP_LPJ_T0020223.1 MGP_LPJ_G0016027.1 mouse_genomes_project 1 67514792 67597235 + MGP_LPJ_P0020223 protein_coding protein_coding MGP_LPJ_T0020224.1 MGP_LPJ_G0016027.1 mouse_genomes_project 1 67558345 67644171 + MGP_LPJ_P0020224 protein_coding protein_coding MGP_LPJ_T0020225.1 MGP_LPJ_G0016027.1 mouse_genomes_project 1 67558348 67644171 + MGP_LPJ_P0020225 protein_coding protein_coding MGP_LPJ_T0020226.1 MGP_LPJ_G0016027.1 mouse_genomes_project 1 67574175 67609289 + MGP_LPJ_P0020226 protein_coding protein_coding MGP_LPJ_T0020227.1 MGP_LPJ_G0016027.1 mouse_genomes_project 1 67574365 67608818 + MGP_LPJ_P0020227 protein_coding protein_coding MGP_LPJ_T0020228.1 MGP_LPJ_G0016027.1 mouse_genomes_project 1 67580604 67641541 + protein_coding processed_transcript MGP_LPJ_T0020229.1 MGP_LPJ_G0016027.1 mouse_genomes_project 1 67580637 67610139 + MGP_LPJ_P0020229 protein_coding protein_coding MGP_LPJ_T0020230.1 MGP_LPJ_G0016027.1 mouse_genomes_project 1 67580644 67604140 + protein_coding processed_transcript MGP_LPJ_T0020231.1 MGP_LPJ_G0016027.1 mouse_genomes_project 1 67580670 67597324 + protein_coding retained_intron MGP_LPJ_T0020232.1 MGP_LPJ_G0016027.1 mouse_genomes_project 1 67611148 67625054 + protein_coding processed_transcript MGP_LPJ_T0020233.1 MGP_LPJ_G0016027.1 mouse_genomes_project 1 67611998 67639889 + MGP_LPJ_P0020233 protein_coding protein_coding MGP_LPJ_T0020234.1 MGP_LPJ_G0016027.1 mouse_genomes_project 1 67611998 67639889 + MGP_LPJ_P0020234 protein_coding protein_coding MGP_LPJ_T0020235.1 MGP_LPJ_G0016027.1 mouse_genomes_project 1 67612689 67639866 + MGP_LPJ_P0020235 protein_coding protein_coding MGP_LPJ_T0020236.1 MGP_LPJ_G0016027.1 mouse_genomes_project 1 67634084 67641038 + MGP_LPJ_P0020236 protein_coding protein_coding MGP_LPJ_T0019822.1 MGP_LPJ_G0015955.1 mouse_genomes_project 1 58098106 58117079 - MGP_LPJ_P0019822 Tyw5 protein_coding protein_coding MGP_LPJ_T0019823.1 MGP_LPJ_G0015955.1 mouse_genomes_project 1 58098109 58116449 - Tyw5 protein_coding retained_intron MGP_LPJ_T0019824.1 MGP_LPJ_G0015955.1 mouse_genomes_project 1 58098109 58116652 - MGP_LPJ_P0019824 Tyw5 protein_coding nonsense_mediated_decay MGP_LPJ_T0019825.1 MGP_LPJ_G0015955.1 mouse_genomes_project 1 58098274 58100641 - Tyw5 protein_coding processed_transcript MGP_LPJ_T0019826.1 MGP_LPJ_G0015955.1 mouse_genomes_project 1 58098285 58103568 - Tyw5 protein_coding retained_intron MGP_LPJ_T0019827.1 MGP_LPJ_G0015955.1 mouse_genomes_project 1 58098535 58116421 - MGP_LPJ_P0019827 Tyw5 protein_coding protein_coding MGP_LPJ_T0019828.1 MGP_LPJ_G0015955.1 mouse_genomes_project 1 58098555 58101610 - Tyw5 protein_coding retained_intron MGP_LPJ_T0019829.1 MGP_LPJ_G0015955.1 mouse_genomes_project 1 58100581 58111382 - Tyw5 protein_coding processed_transcript MGP_LPJ_T0019830.1 MGP_LPJ_G0015955.1 mouse_genomes_project 1 58101298 58116449 - MGP_LPJ_P0019830 Tyw5 protein_coding nonsense_mediated_decay MGP_LPJ_T0019831.1 MGP_LPJ_G0015955.1 mouse_genomes_project 1 58103054 58116515 - Tyw5 protein_coding retained_intron MGP_LPJ_T0009530.1 MGP_LPJ_G0007648.1 mouse_genomes_project 1 89026813 89026870 - Gm22955 miRNA miRNA MGP_LPJ_T0009503.1 MGP_LPJ_G0007621.1 mouse_genomes_project 1 47226234 47226339 - Mir6350 miRNA miRNA MGP_LPJ_T0022539.1 MGP_LPJ_G0016503.1 mouse_genomes_project 1 157719297 157747824 - 1700025G04Rik protein_coding retained_intron MGP_LPJ_T0022540.1 MGP_LPJ_G0016503.1 mouse_genomes_project 1 157719634 157890979 - MGP_LPJ_P0022540 1700025G04Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0022541.1 MGP_LPJ_G0016503.1 mouse_genomes_project 1 157719791 157842024 - MGP_LPJ_P0022541 1700025G04Rik protein_coding unknown_likely_coding MGP_LPJ_T0020678.1 MGP_LPJ_G0016105.1 mouse_genomes_project 1 77184440 77192376 - Obsl1 protein_coding retained_intron MGP_LPJ_T0020683.1 MGP_LPJ_G0016105.1 mouse_genomes_project 1 77190967 77213511 - MGP_LPJ_P0020683 Obsl1 protein_coding protein_coding MGP_LPJ_T0020684.1 MGP_LPJ_G0016105.1 mouse_genomes_project 1 77191993 77192945 - Obsl1 protein_coding retained_intron MGP_LPJ_T0020685.1 MGP_LPJ_G0016105.1 mouse_genomes_project 1 77192365 77193221 - Obsl1 protein_coding retained_intron MGP_LPJ_T0020686.1 MGP_LPJ_G0016105.1 mouse_genomes_project 1 77195676 77212791 - MGP_LPJ_P0020686 Obsl1 protein_coding protein_coding MGP_LPJ_T0020687.1 MGP_LPJ_G0016105.1 mouse_genomes_project 1 77195991 77198210 - MGP_LPJ_P0020687 Obsl1 protein_coding protein_coding MGP_LPJ_T0020688.1 MGP_LPJ_G0016105.1 mouse_genomes_project 1 77196111 77196954 - Obsl1 protein_coding retained_intron MGP_LPJ_T0020689.1 MGP_LPJ_G0016105.1 mouse_genomes_project 1 77196500 77197774 - Obsl1 protein_coding processed_transcript MGP_LPJ_T0020690.1 MGP_LPJ_G0016105.1 mouse_genomes_project 1 77197537 77198184 - Obsl1 protein_coding retained_intron MGP_LPJ_T0020691.1 MGP_LPJ_G0016105.1 mouse_genomes_project 1 77203425 77213511 - MGP_LPJ_P0020691 Obsl1 protein_coding protein_coding MGP_LPJ_T0020692.1 MGP_LPJ_G0016105.1 mouse_genomes_project 1 77203426 77210830 - Obsl1 protein_coding retained_intron MGP_LPJ_T0020693.1 MGP_LPJ_G0016105.1 mouse_genomes_project 1 77208762 77213602 - Obsl1 protein_coding retained_intron MGP_LPJ_T0020694.1 MGP_LPJ_G0016105.1 mouse_genomes_project 1 77208762 77213511 - Obsl1 protein_coding retained_intron MGP_LPJ_T0101722.1 MGP_LPJ_G0039760.1 mouse_genomes_project 1 167528669 167589888 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0019716.1 MGP_LPJ_G0015929.1 mouse_genomes_project 1 53118289 53146848 - MGP_LPJ_P0019716 1700019A02Rik protein_coding protein_coding MGP_LPJ_T0021207.1 MGP_LPJ_G0016219.1 mouse_genomes_project 1 93946137 93970886 + Ube2f protein_coding retained_intron MGP_LPJ_T0021208.1 MGP_LPJ_G0016219.1 mouse_genomes_project 1 93946144 93981160 + MGP_LPJ_P0021208 Ube2f protein_coding protein_coding MGP_LPJ_T0021209.1 MGP_LPJ_G0016219.1 mouse_genomes_project 1 93946152 93981445 + MGP_LPJ_P0021209 Ube2f protein_coding protein_coding MGP_LPJ_T0021210.1 MGP_LPJ_G0016219.1 mouse_genomes_project 1 93946170 93985761 + MGP_LPJ_P0021210 Ube2f protein_coding protein_coding MGP_LPJ_T0021211.1 MGP_LPJ_G0016219.1 mouse_genomes_project 1 93946198 93981193 + MGP_LPJ_P0021211 Ube2f protein_coding protein_coding MGP_LPJ_T0021212.1 MGP_LPJ_G0016219.1 mouse_genomes_project 1 93946399 93981347 + MGP_LPJ_P0021212 Ube2f protein_coding protein_coding MGP_LPJ_T0021213.1 MGP_LPJ_G0016219.1 mouse_genomes_project 1 93946489 93961011 + MGP_LPJ_P0021213 Ube2f protein_coding protein_coding MGP_LPJ_T0021214.1 MGP_LPJ_G0016219.1 mouse_genomes_project 1 93960360 93971864 + Ube2f protein_coding retained_intron MGP_LPJ_T0021215.1 MGP_LPJ_G0016219.1 mouse_genomes_project 1 93970364 93971972 + Ube2f protein_coding retained_intron MGP_LPJ_T0021216.1 MGP_LPJ_G0016219.1 mouse_genomes_project 1 93971517 93980811 + Ube2f protein_coding retained_intron MGP_LPJ_T0021217.1 MGP_LPJ_G0016219.1 mouse_genomes_project 1 93979071 93980436 + Ube2f protein_coding retained_intron MGP_LPJ_T0012166.1 MGP_LPJ_G0010257.1 mouse_genomes_project 1 107852930 107853998 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017032.1 MGP_LPJ_G0015042.1 mouse_genomes_project 1 203300656 203344533 + A330023F24Rik processed_transcript lincRNA MGP_LPJ_T0017033.1 MGP_LPJ_G0015042.1 mouse_genomes_project 1 203300666 203350422 + A330023F24Rik processed_transcript retained_intron MGP_LPJ_T0017034.1 MGP_LPJ_G0015042.1 mouse_genomes_project 1 203340475 203359926 + A330023F24Rik processed_transcript lincRNA MGP_LPJ_T0017035.1 MGP_LPJ_G0015042.1 mouse_genomes_project 1 203347102 203360901 + A330023F24Rik processed_transcript retained_intron MGP_LPJ_T0000653.1 MGP_LPJ_G0000588.1 mouse_genomes_project 1 134031846 134032805 + TEC TEC MGP_LPJ_T0012238.1 MGP_LPJ_G0010329.1 mouse_genomes_project 1 135956239 135957414 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000542.1 MGP_LPJ_G0000477.1 mouse_genomes_project 1 69459895 69470194 - TEC TEC MGP_LPJ_T0000394.1 MGP_LPJ_G0000332.1 mouse_genomes_project 1 2130476 2131587 - TEC TEC MGP_LPJ_T0000773.1 MGP_LPJ_G0000706.1 mouse_genomes_project 1 178264063 178265320 + TEC TEC MGP_LPJ_T0000638.1 MGP_LPJ_G0000573.1 mouse_genomes_project 1 128158826 128161680 - TEC TEC MGP_LPJ_T0018957.1 MGP_LPJ_G0015778.1 mouse_genomes_project 1 15479683 15519140 + MGP_LPJ_P0018957 Crispld1 protein_coding protein_coding MGP_LPJ_T0018958.1 MGP_LPJ_G0015778.1 mouse_genomes_project 1 15479697 15498357 + MGP_LPJ_P0018958 Crispld1 protein_coding protein_coding MGP_LPJ_T0018959.1 MGP_LPJ_G0015778.1 mouse_genomes_project 1 15479726 15519911 + MGP_LPJ_P0018959 Crispld1 protein_coding protein_coding MGP_LPJ_T0005825.1 MGP_LPJ_G0004885.1 mouse_genomes_project 1 80487341 80492017 + Gm29611 lincRNA lincRNA MGP_LPJ_T0023499.1 MGP_LPJ_G0016700.1 mouse_genomes_project 1 179222193 179248502 - MGP_LPJ_P0023499 Atp1a2 protein_coding protein_coding MGP_LPJ_T0023500.1 MGP_LPJ_G0016700.1 mouse_genomes_project 1 179225064 179248502 - Atp1a2 protein_coding retained_intron MGP_LPJ_T0023501.1 MGP_LPJ_G0016700.1 mouse_genomes_project 1 179226418 179226953 - Atp1a2 protein_coding retained_intron MGP_LPJ_T0023502.1 MGP_LPJ_G0016700.1 mouse_genomes_project 1 179228572 179248502 - MGP_LPJ_P0023502 Atp1a2 protein_coding protein_coding MGP_LPJ_T0023503.1 MGP_LPJ_G0016700.1 mouse_genomes_project 1 179234706 179248502 - Atp1a2 protein_coding retained_intron MGP_LPJ_T0011973.1 MGP_LPJ_G0010064.1 mouse_genomes_project 1 33515408 33515556 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021045.1 MGP_LPJ_G0016181.1 mouse_genomes_project 1 89891614 89896862 + MGP_LPJ_P0021045 3110079O15Rik protein_coding protein_coding MGP_LPJ_T0021046.1 MGP_LPJ_G0016181.1 mouse_genomes_project 1 89893882 89896838 + 3110079O15Rik protein_coding processed_transcript MGP_LPJ_T0101726.1 MGP_LPJ_G0039764.1 mouse_genomes_project 1 180047792 180048044 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0020437.1 MGP_LPJ_G0016069.1 mouse_genomes_project 1 76257180 76282585 + MGP_LPJ_P0020437 Plcd4 protein_coding protein_coding MGP_LPJ_T0020438.1 MGP_LPJ_G0016069.1 mouse_genomes_project 1 76257180 76282585 + MGP_LPJ_P0020438 Plcd4 protein_coding protein_coding MGP_LPJ_T0020439.1 MGP_LPJ_G0016069.1 mouse_genomes_project 1 76257180 76282585 + MGP_LPJ_P0020439 Plcd4 protein_coding nonsense_mediated_decay MGP_LPJ_T0020440.1 MGP_LPJ_G0016069.1 mouse_genomes_project 1 76257195 76275388 + Plcd4 protein_coding retained_intron MGP_LPJ_T0020441.1 MGP_LPJ_G0016069.1 mouse_genomes_project 1 76257195 76280768 + MGP_LPJ_P0020441 Plcd4 protein_coding protein_coding MGP_LPJ_T0020442.1 MGP_LPJ_G0016069.1 mouse_genomes_project 1 76257195 76280768 + MGP_LPJ_P0020442 Plcd4 protein_coding protein_coding MGP_LPJ_T0020443.1 MGP_LPJ_G0016069.1 mouse_genomes_project 1 76258653 76260565 + Plcd4 protein_coding retained_intron MGP_LPJ_T0020444.1 MGP_LPJ_G0016069.1 mouse_genomes_project 1 76258657 76280768 + MGP_LPJ_P0020444 Plcd4 protein_coding nonsense_mediated_decay MGP_LPJ_T0020445.1 MGP_LPJ_G0016069.1 mouse_genomes_project 1 76258657 76280768 + MGP_LPJ_P0020445 Plcd4 protein_coding protein_coding MGP_LPJ_T0020446.1 MGP_LPJ_G0016069.1 mouse_genomes_project 1 76275208 76280092 + Plcd4 protein_coding processed_transcript MGP_LPJ_T0020447.1 MGP_LPJ_G0016069.1 mouse_genomes_project 1 76279226 76280417 + Plcd4 protein_coding retained_intron MGP_LPJ_T0020405.1 MGP_LPJ_G0016063.1 mouse_genomes_project 1 76061921 76068971 + MGP_LPJ_P0020405 Catip protein_coding protein_coding MGP_LPJ_T0020406.1 MGP_LPJ_G0016063.1 mouse_genomes_project 1 76062179 76067448 + MGP_LPJ_P0020406 Catip protein_coding protein_coding MGP_LPJ_T0020407.1 MGP_LPJ_G0016063.1 mouse_genomes_project 1 76062255 76068800 + MGP_LPJ_P0020407 Catip protein_coding protein_coding MGP_LPJ_T0020408.1 MGP_LPJ_G0016063.1 mouse_genomes_project 1 76064344 76066391 + Catip protein_coding retained_intron MGP_LPJ_T0000457.1 MGP_LPJ_G0000393.1 mouse_genomes_project 1 23922669 23923683 - TEC TEC MGP_LPJ_T0000812.1 MGP_LPJ_G0000743.1 mouse_genomes_project 1 190762891 190765723 + TEC TEC MGP_LPJ_T0023395.1 MGP_LPJ_G0016675.1 mouse_genomes_project 1 178268353 178270697 - MGP_LPJ_P0023395 Klhdc9 protein_coding protein_coding MGP_LPJ_T0021154.1 MGP_LPJ_G0016209.1 mouse_genomes_project 1 92650294 92769928 - MGP_LPJ_P0021154 Iqca protein_coding protein_coding MGP_LPJ_T0021155.1 MGP_LPJ_G0016209.1 mouse_genomes_project 1 92650297 92699619 - Iqca protein_coding processed_transcript MGP_LPJ_T0021156.1 MGP_LPJ_G0016209.1 mouse_genomes_project 1 92650788 92769702 - MGP_LPJ_P0021156 Iqca protein_coding unknown_likely_coding MGP_LPJ_T0021157.1 MGP_LPJ_G0016209.1 mouse_genomes_project 1 92668852 92676541 - MGP_LPJ_P0021157 Iqca protein_coding protein_coding MGP_LPJ_T0021158.1 MGP_LPJ_G0016209.1 mouse_genomes_project 1 92691750 92699619 - Iqca protein_coding processed_transcript MGP_LPJ_T0021159.1 MGP_LPJ_G0016209.1 mouse_genomes_project 1 92742716 92769928 - Iqca protein_coding processed_transcript MGP_LPJ_T0011901.1 MGP_LPJ_G0009992.1 mouse_genomes_project 1 9132530 9132792 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011966.1 MGP_LPJ_G0010057.1 mouse_genomes_project 1 33093199 33094836 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011896.1 MGP_LPJ_G0009987.1 mouse_genomes_project 1 8054203 8055683 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012298.1 MGP_LPJ_G0010389.1 mouse_genomes_project 1 163769187 163769792 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009524.1 MGP_LPJ_G0007642.1 mouse_genomes_project 1 84880259 84880312 + Gm22396 miRNA miRNA MGP_LPJ_T0000391.1 MGP_LPJ_G0000329.1 mouse_genomes_project 1 940982 943333 + TEC TEC MGP_LPJ_T0019154.1 MGP_LPJ_G0015822.1 mouse_genomes_project 1 33166461 33175679 + MGP_LPJ_P0019154 Imp4 protein_coding protein_coding MGP_LPJ_T0019155.1 MGP_LPJ_G0015822.1 mouse_genomes_project 1 33166508 33168850 + Imp4 protein_coding retained_intron MGP_LPJ_T0019156.1 MGP_LPJ_G0015822.1 mouse_genomes_project 1 33166515 33170155 + MGP_LPJ_P0019156 Imp4 protein_coding nonsense_mediated_decay MGP_LPJ_T0019157.1 MGP_LPJ_G0015822.1 mouse_genomes_project 1 33166515 33170686 + MGP_LPJ_P0019157 Imp4 protein_coding nonsense_mediated_decay MGP_LPJ_T0019158.1 MGP_LPJ_G0015822.1 mouse_genomes_project 1 33166547 33170326 + Imp4 protein_coding processed_transcript MGP_LPJ_T0019159.1 MGP_LPJ_G0015822.1 mouse_genomes_project 1 33166563 33169738 + Imp4 protein_coding processed_transcript MGP_LPJ_T0019160.1 MGP_LPJ_G0015822.1 mouse_genomes_project 1 33166651 33170813 + MGP_LPJ_P0019160 Imp4 protein_coding nonsense_mediated_decay MGP_LPJ_T0019161.1 MGP_LPJ_G0015822.1 mouse_genomes_project 1 33174569 33175263 + Imp4 protein_coding processed_transcript MGP_LPJ_T0022968.1 MGP_LPJ_G0016580.1 mouse_genomes_project 1 169118379 169130067 - 7420461P10Rik protein_coding processed_transcript MGP_LPJ_T0022969.1 MGP_LPJ_G0016580.1 mouse_genomes_project 1 169118379 169131332 - MGP_LPJ_P0022969 7420461P10Rik protein_coding protein_coding MGP_LPJ_T0022970.1 MGP_LPJ_G0016580.1 mouse_genomes_project 1 169118389 169131445 - MGP_LPJ_P0022970 7420461P10Rik protein_coding protein_coding MGP_LPJ_T0019773.1 MGP_LPJ_G0015943.1 mouse_genomes_project 1 55521005 55564443 - MGP_LPJ_P0019773 Sf3b1 protein_coding protein_coding MGP_LPJ_T0019774.1 MGP_LPJ_G0015943.1 mouse_genomes_project 1 55521009 55526952 - Sf3b1 protein_coding retained_intron MGP_LPJ_T0019775.1 MGP_LPJ_G0015943.1 mouse_genomes_project 1 55524789 55528378 - Sf3b1 protein_coding retained_intron MGP_LPJ_T0019776.1 MGP_LPJ_G0015943.1 mouse_genomes_project 1 55540342 55564426 - Sf3b1 protein_coding retained_intron MGP_LPJ_T0019777.1 MGP_LPJ_G0015943.1 mouse_genomes_project 1 55544857 55552291 - Sf3b1 protein_coding retained_intron MGP_LPJ_T0019778.1 MGP_LPJ_G0015943.1 mouse_genomes_project 1 55549353 55564356 - MGP_LPJ_P0019778 Sf3b1 protein_coding nonsense_mediated_decay MGP_LPJ_T0019779.1 MGP_LPJ_G0015943.1 mouse_genomes_project 1 55552898 55564335 - Sf3b1 protein_coding processed_transcript MGP_LPJ_T0019780.1 MGP_LPJ_G0015943.1 mouse_genomes_project 1 55553028 55554027 - Sf3b1 protein_coding retained_intron MGP_LPJ_T0000762.1 MGP_LPJ_G0000695.1 mouse_genomes_project 1 171107794 171110878 + TEC TEC MGP_LPJ_T0005992.1 MGP_LPJ_G0005021.1 mouse_genomes_project 1 171175648 171184030 + lincRNA lincRNA MGP_LPJ_T0101727.1 MGP_LPJ_G0039765.1 mouse_genomes_project 1 180101785 180102968 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0019857.1 MGP_LPJ_G0015960.1 mouse_genomes_project 1 58758581 58832993 + MGP_LPJ_P0019857 Aox1 protein_coding protein_coding MGP_LPJ_T0019858.1 MGP_LPJ_G0015960.1 mouse_genomes_project 1 58758614 58799461 + Aox1 protein_coding retained_intron MGP_LPJ_T0024200.1 MGP_LPJ_G0016869.1 mouse_genomes_project 1 200416831 200747777 + MGP_LPJ_P0024200 Kcnh1 protein_coding protein_coding MGP_LPJ_T0024201.1 MGP_LPJ_G0016869.1 mouse_genomes_project 1 200416831 200747777 + MGP_LPJ_P0024201 Kcnh1 protein_coding protein_coding MGP_LPJ_T0024202.1 MGP_LPJ_G0016869.1 mouse_genomes_project 1 200671273 200747777 + MGP_LPJ_P0024202 Kcnh1 protein_coding protein_coding MGP_LPJ_T0003023.1 MGP_LPJ_G0002831.1 mouse_genomes_project 1 201104630 201105954 + Gm15867 antisense antisense MGP_LPJ_T0005848.1 MGP_LPJ_G0004904.1 mouse_genomes_project 1 91603673 91609821 + 1700067G17Rik lincRNA lincRNA MGP_LPJ_T0009569.1 MGP_LPJ_G0007687.1 mouse_genomes_project 1 178547048 178547109 - Mir7683 miRNA miRNA MGP_LPJ_T0012197.1 MGP_LPJ_G0010288.1 mouse_genomes_project 1 116738820 116740210 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023169.1 MGP_LPJ_G0016623.1 mouse_genomes_project 1 172992741 173019236 - MGP_LPJ_P0023169 Pogk protein_coding protein_coding MGP_LPJ_T0023170.1 MGP_LPJ_G0016623.1 mouse_genomes_project 1 173000342 173018845 - MGP_LPJ_P0023170 Pogk protein_coding protein_coding MGP_LPJ_T0023171.1 MGP_LPJ_G0016623.1 mouse_genomes_project 1 173001728 173019282 - MGP_LPJ_P0023171 Pogk protein_coding protein_coding MGP_LPJ_T0023172.1 MGP_LPJ_G0016623.1 mouse_genomes_project 1 173003511 173019241 - MGP_LPJ_P0023172 Pogk protein_coding nonsense_mediated_decay MGP_LPJ_T0023173.1 MGP_LPJ_G0016623.1 mouse_genomes_project 1 173004283 173019317 - MGP_LPJ_P0023173 Pogk protein_coding protein_coding MGP_LPJ_T0023174.1 MGP_LPJ_G0016623.1 mouse_genomes_project 1 173012794 173018743 - MGP_LPJ_P0023174 Pogk protein_coding protein_coding MGP_LPJ_T0000490.1 MGP_LPJ_G0000425.1 mouse_genomes_project 1 38494853 38495738 - TEC TEC MGP_LPJ_T0011984.1 MGP_LPJ_G0010075.1 mouse_genomes_project 1 37763253 37763755 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011979.1 MGP_LPJ_G0010070.1 mouse_genomes_project 1 34827789 34828693 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098795.1 MGP_LPJ_G0037058.1 mouse_genomes_project 1 173985108 173985215 + Gm24182 snRNA snRNA MGP_LPJ_T0002795.1 MGP_LPJ_G0002656.1 mouse_genomes_project 1 19144377 19181025 - antisense antisense MGP_LPJ_T0000811.1 MGP_LPJ_G0000742.1 mouse_genomes_project 1 190526861 190528815 + TEC TEC MGP_LPJ_T0021182.1 MGP_LPJ_G0016215.1 mouse_genomes_project 1 93653618 93665098 - MGP_LPJ_P0021182 Rab17 protein_coding protein_coding MGP_LPJ_T0021183.1 MGP_LPJ_G0016215.1 mouse_genomes_project 1 93653620 93663115 - MGP_LPJ_P0021183 Rab17 protein_coding protein_coding MGP_LPJ_T0021184.1 MGP_LPJ_G0016215.1 mouse_genomes_project 1 93654216 93664985 - Rab17 protein_coding processed_transcript MGP_LPJ_T0021185.1 MGP_LPJ_G0016215.1 mouse_genomes_project 1 93654339 93663065 - Rab17 protein_coding processed_transcript MGP_LPJ_T0021186.1 MGP_LPJ_G0016215.1 mouse_genomes_project 1 93655388 93665081 - MGP_LPJ_P0021186 Rab17 protein_coding protein_coding MGP_LPJ_T0099994.1 MGP_LPJ_G0038257.1 mouse_genomes_project 1 86024898 86025022 + Gm24555 snoRNA snoRNA MGP_LPJ_T0002806.1 MGP_LPJ_G0002665.1 mouse_genomes_project 1 36592093 36593207 + 4930556I23Rik antisense antisense MGP_LPJ_T0012134.1 MGP_LPJ_G0010225.1 mouse_genomes_project 1 91303800 91304264 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023213.1 MGP_LPJ_G0016636.1 mouse_genomes_project 1 176193180 176228292 - MGP_LPJ_P0023213 Nuf2 protein_coding protein_coding MGP_LPJ_T0023214.1 MGP_LPJ_G0016636.1 mouse_genomes_project 1 176193559 176228256 - MGP_LPJ_P0023214 Nuf2 protein_coding protein_coding MGP_LPJ_T0023215.1 MGP_LPJ_G0016636.1 mouse_genomes_project 1 176202662 176218468 - MGP_LPJ_P0023215 Nuf2 protein_coding protein_coding MGP_LPJ_T0023216.1 MGP_LPJ_G0016636.1 mouse_genomes_project 1 176206553 176228239 - MGP_LPJ_P0023216 Nuf2 protein_coding protein_coding MGP_LPJ_T0023217.1 MGP_LPJ_G0016636.1 mouse_genomes_project 1 176221107 176228246 - Nuf2 protein_coding retained_intron MGP_LPJ_T0023556.1 MGP_LPJ_G0016717.1 mouse_genomes_project 1 180162466 180163408 + MGP_LPJ_P0023556 Olfr218 protein_coding protein_coding MGP_LPJ_T0023597.1 MGP_LPJ_G0016740.1 mouse_genomes_project 1 181231696 181239733 + MGP_LPJ_P0023597 Olfr427 protein_coding protein_coding MGP_LPJ_T0005777.1 MGP_LPJ_G0004851.1 mouse_genomes_project 1 63833400 63844415 - Gm4208 lincRNA lincRNA MGP_LPJ_T0023434.1 MGP_LPJ_G0016686.1 mouse_genomes_project 1 178685324 178722082 + MGP_LPJ_P0023434 Slamf1 protein_coding protein_coding MGP_LPJ_T0023435.1 MGP_LPJ_G0016686.1 mouse_genomes_project 1 178685352 178716736 + Slamf1 protein_coding retained_intron MGP_LPJ_T0023436.1 MGP_LPJ_G0016686.1 mouse_genomes_project 1 178692095 178720522 + MGP_LPJ_P0023436 Slamf1 protein_coding unknown_likely_coding MGP_LPJ_T0002898.1 MGP_LPJ_G0002734.1 mouse_genomes_project 1 125672108 125676016 - Gm15392 antisense antisense MGP_LPJ_T0024030.1 MGP_LPJ_G0016838.1 mouse_genomes_project 1 195027203 195192160 - MGP_LPJ_P0024030 Spata17 protein_coding protein_coding MGP_LPJ_T0024031.1 MGP_LPJ_G0016838.1 mouse_genomes_project 1 195030970 195192141 - MGP_LPJ_P0024031 Spata17 protein_coding protein_coding MGP_LPJ_T0024032.1 MGP_LPJ_G0016838.1 mouse_genomes_project 1 195089953 195121231 - MGP_LPJ_P0024032 Spata17 protein_coding protein_coding MGP_LPJ_T0024033.1 MGP_LPJ_G0016838.1 mouse_genomes_project 1 195094754 195192132 - MGP_LPJ_P0024033 Spata17 protein_coding protein_coding MGP_LPJ_T0024034.1 MGP_LPJ_G0016838.1 mouse_genomes_project 1 195113369 195121424 - MGP_LPJ_P0024034 Spata17 protein_coding protein_coding MGP_LPJ_T0024035.1 MGP_LPJ_G0016838.1 mouse_genomes_project 1 195113369 195192116 - MGP_LPJ_P0024035 Spata17 protein_coding protein_coding MGP_LPJ_T0024036.1 MGP_LPJ_G0016838.1 mouse_genomes_project 1 195113376 195121411 - Spata17 protein_coding processed_transcript MGP_LPJ_T0024037.1 MGP_LPJ_G0016838.1 mouse_genomes_project 1 195166665 195192141 - Spata17 protein_coding processed_transcript MGP_LPJ_T0022113.1 MGP_LPJ_G0016418.1 mouse_genomes_project 1 139101117 139111846 + MGP_LPJ_P0022113 Chil1 protein_coding protein_coding MGP_LPJ_T0022114.1 MGP_LPJ_G0016418.1 mouse_genomes_project 1 139101345 139111839 + MGP_LPJ_P0022114 Chil1 protein_coding protein_coding MGP_LPJ_T0022115.1 MGP_LPJ_G0016418.1 mouse_genomes_project 1 139101345 139111991 + MGP_LPJ_P0022115 Chil1 protein_coding protein_coding MGP_LPJ_T0022116.1 MGP_LPJ_G0016418.1 mouse_genomes_project 1 139101415 139108361 + MGP_LPJ_P0022116 Chil1 protein_coding protein_coding MGP_LPJ_T0022117.1 MGP_LPJ_G0016418.1 mouse_genomes_project 1 139101422 139108371 + MGP_LPJ_P0022117 Chil1 protein_coding protein_coding MGP_LPJ_T0022118.1 MGP_LPJ_G0016418.1 mouse_genomes_project 1 139101423 139108648 + Chil1 protein_coding retained_intron MGP_LPJ_T0022119.1 MGP_LPJ_G0016418.1 mouse_genomes_project 1 139102742 139108430 + Chil1 protein_coding retained_intron MGP_LPJ_T0022120.1 MGP_LPJ_G0016418.1 mouse_genomes_project 1 139110935 139111837 + Chil1 protein_coding retained_intron MGP_LPJ_T0023375.1 MGP_LPJ_G0016672.1 mouse_genomes_project 1 178236776 178250326 + MGP_LPJ_P0023375 Dedd protein_coding protein_coding MGP_LPJ_T0023376.1 MGP_LPJ_G0016672.1 mouse_genomes_project 1 178237030 178250320 + MGP_LPJ_P0023376 Dedd protein_coding protein_coding MGP_LPJ_T0023377.1 MGP_LPJ_G0016672.1 mouse_genomes_project 1 178237039 178249681 + MGP_LPJ_P0023377 Dedd protein_coding protein_coding MGP_LPJ_T0023378.1 MGP_LPJ_G0016672.1 mouse_genomes_project 1 178237197 178248302 + MGP_LPJ_P0023378 Dedd protein_coding protein_coding MGP_LPJ_T0023379.1 MGP_LPJ_G0016672.1 mouse_genomes_project 1 178237289 178248957 + MGP_LPJ_P0023379 Dedd protein_coding protein_coding MGP_LPJ_T0023380.1 MGP_LPJ_G0016672.1 mouse_genomes_project 1 178237562 178246417 + MGP_LPJ_P0023380 Dedd protein_coding protein_coding MGP_LPJ_T0023381.1 MGP_LPJ_G0016672.1 mouse_genomes_project 1 178237839 178246346 + MGP_LPJ_P0023381 Dedd protein_coding protein_coding MGP_LPJ_T0023382.1 MGP_LPJ_G0016672.1 mouse_genomes_project 1 178238908 178249615 + MGP_LPJ_P0023382 Dedd protein_coding protein_coding MGP_LPJ_T0023383.1 MGP_LPJ_G0016672.1 mouse_genomes_project 1 178244816 178248139 + Dedd protein_coding retained_intron MGP_LPJ_T0023384.1 MGP_LPJ_G0016672.1 mouse_genomes_project 1 178245990 178248232 + MGP_LPJ_P0023384 Dedd protein_coding protein_coding MGP_LPJ_T0023399.1 MGP_LPJ_G0016677.1 mouse_genomes_project 1 178300882 178322292 + Arhgap30 protein_coding retained_intron MGP_LPJ_T0023400.1 MGP_LPJ_G0016677.1 mouse_genomes_project 1 178300882 178322234 + Arhgap30 protein_coding retained_intron MGP_LPJ_T0023401.1 MGP_LPJ_G0016677.1 mouse_genomes_project 1 178300882 178322234 + MGP_LPJ_P0023401 Arhgap30 protein_coding protein_coding MGP_LPJ_T0023402.1 MGP_LPJ_G0016677.1 mouse_genomes_project 1 178300927 178304744 + Arhgap30 protein_coding retained_intron MGP_LPJ_T0000829.1 MGP_LPJ_G0000760.1 mouse_genomes_project 1 199846204 199846833 + TEC TEC MGP_LPJ_T0101698.1 MGP_LPJ_G0039736.1 mouse_genomes_project 1 90627335 90628115 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0023251.1 MGP_LPJ_G0016647.1 mouse_genomes_project 1 177118257 177143345 - Nos1ap protein_coding processed_transcript MGP_LPJ_T0023253.1 MGP_LPJ_G0016647.1 mouse_genomes_project 1 177132167 177428210 - MGP_LPJ_P0023253 Nos1ap protein_coding protein_coding MGP_LPJ_T0023254.1 MGP_LPJ_G0016647.1 mouse_genomes_project 1 177132207 177136496 - Nos1ap protein_coding retained_intron MGP_LPJ_T0023255.1 MGP_LPJ_G0016647.1 mouse_genomes_project 1 177133420 177140055 - Nos1ap protein_coding processed_transcript MGP_LPJ_T0023256.1 MGP_LPJ_G0016647.1 mouse_genomes_project 1 177143157 177427713 - MGP_LPJ_P0023256 Nos1ap protein_coding protein_coding MGP_LPJ_T0023257.1 MGP_LPJ_G0016647.1 mouse_genomes_project 1 177143303 177427646 - MGP_LPJ_P0023257 Nos1ap protein_coding protein_coding MGP_LPJ_T0023258.1 MGP_LPJ_G0016647.1 mouse_genomes_project 1 177153763 177282465 - Nos1ap protein_coding processed_transcript MGP_LPJ_T0023259.1 MGP_LPJ_G0016647.1 mouse_genomes_project 1 177193306 177428198 - Nos1ap protein_coding retained_intron MGP_LPJ_T0012044.1 MGP_LPJ_G0010135.1 mouse_genomes_project 1 55899815 55900211 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002959.1 MGP_LPJ_G0002781.1 mouse_genomes_project 1 169757575 169764276 + Gm20471 antisense antisense MGP_LPJ_T0011930.1 MGP_LPJ_G0010021.1 mouse_genomes_project 1 19996524 19997076 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012315.1 MGP_LPJ_G0010406.1 mouse_genomes_project 1 172162442 172163274 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011988.1 MGP_LPJ_G0010079.1 mouse_genomes_project 1 40030309 40030805 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000601.1 MGP_LPJ_G0000536.1 mouse_genomes_project 1 94649629 94652919 + TEC TEC MGP_LPJ_T0009515.1 MGP_LPJ_G0007633.1 mouse_genomes_project 1 75515304 75515403 - Mir6351 miRNA miRNA MGP_LPJ_T0005983.1 MGP_LPJ_G0005013.1 mouse_genomes_project 1 167132782 167135218 + Gm37083 lincRNA lincRNA MGP_LPJ_T0098467.1 MGP_LPJ_G0036747.1 mouse_genomes_project 1 195098310 195101803 - Gm15509 sense_intronic sense_intronic MGP_LPJ_T0019679.1 MGP_LPJ_G0015922.1 mouse_genomes_project 1 52450530 52494381 - MGP_LPJ_P0019679 Nab1 protein_coding protein_coding MGP_LPJ_T0019680.1 MGP_LPJ_G0015922.1 mouse_genomes_project 1 52450530 52494002 - MGP_LPJ_P0019680 Nab1 protein_coding protein_coding MGP_LPJ_T0019681.1 MGP_LPJ_G0015922.1 mouse_genomes_project 1 52452424 52484403 - MGP_LPJ_P0019681 Nab1 protein_coding protein_coding MGP_LPJ_T0019682.1 MGP_LPJ_G0015922.1 mouse_genomes_project 1 52452447 52460110 - Nab1 protein_coding retained_intron MGP_LPJ_T0019683.1 MGP_LPJ_G0015922.1 mouse_genomes_project 1 52483976 52494017 - Nab1 protein_coding processed_transcript MGP_LPJ_T0022284.1 MGP_LPJ_G0016454.1 mouse_genomes_project 1 141079745 141149235 + MGP_LPJ_P0022284 Cacna1s protein_coding protein_coding MGP_LPJ_T0022285.1 MGP_LPJ_G0016454.1 mouse_genomes_project 1 141079779 141149240 + MGP_LPJ_P0022285 Cacna1s protein_coding protein_coding MGP_LPJ_T0022286.1 MGP_LPJ_G0016454.1 mouse_genomes_project 1 141079896 141149527 + MGP_LPJ_P0022286 Cacna1s protein_coding protein_coding MGP_LPJ_T0022287.1 MGP_LPJ_G0016454.1 mouse_genomes_project 1 141100528 141149234 + MGP_LPJ_P0022287 Cacna1s protein_coding protein_coding MGP_LPJ_T0022288.1 MGP_LPJ_G0016454.1 mouse_genomes_project 1 141135026 141141675 + Cacna1s protein_coding retained_intron MGP_LPJ_T0022289.1 MGP_LPJ_G0016454.1 mouse_genomes_project 1 141146960 141149234 + Cacna1s protein_coding processed_transcript MGP_LPJ_T0024161.1 MGP_LPJ_G0016862.1 mouse_genomes_project 1 199825365 199872017 + MGP_LPJ_P0024161 Ints7 protein_coding protein_coding MGP_LPJ_T0024162.1 MGP_LPJ_G0016862.1 mouse_genomes_project 1 199825455 199858173 + Ints7 protein_coding retained_intron MGP_LPJ_T0024163.1 MGP_LPJ_G0016862.1 mouse_genomes_project 1 199825470 199870117 + MGP_LPJ_P0024163 Ints7 protein_coding nonsense_mediated_decay MGP_LPJ_T0024164.1 MGP_LPJ_G0016862.1 mouse_genomes_project 1 199825490 199856791 + MGP_LPJ_P0024164 Ints7 protein_coding nonsense_mediated_decay MGP_LPJ_T0024165.1 MGP_LPJ_G0016862.1 mouse_genomes_project 1 199825490 199871075 + MGP_LPJ_P0024165 Ints7 protein_coding nonsense_mediated_decay MGP_LPJ_T0024166.1 MGP_LPJ_G0016862.1 mouse_genomes_project 1 199825504 199833206 + Ints7 protein_coding retained_intron MGP_LPJ_T0101681.1 MGP_LPJ_G0039719.1 mouse_genomes_project 1 52139224 52140112 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0006026.1 MGP_LPJ_G0005050.1 mouse_genomes_project 1 188520584 188530928 + Gm17275 lincRNA lincRNA MGP_LPJ_T0002907.1 MGP_LPJ_G0002740.1 mouse_genomes_project 1 136001663 136002710 + Gm28914 antisense antisense MGP_LPJ_T0020460.1 MGP_LPJ_G0016072.1 mouse_genomes_project 1 76309761 76319354 - MGP_LPJ_P0020460 Rnf25 protein_coding protein_coding MGP_LPJ_T0020461.1 MGP_LPJ_G0016072.1 mouse_genomes_project 1 76309761 76319329 - MGP_LPJ_P0020461 Rnf25 protein_coding nonsense_mediated_decay MGP_LPJ_T0020462.1 MGP_LPJ_G0016072.1 mouse_genomes_project 1 76309766 76319334 - MGP_LPJ_P0020462 Rnf25 protein_coding protein_coding MGP_LPJ_T0020463.1 MGP_LPJ_G0016072.1 mouse_genomes_project 1 76310235 76310815 - Rnf25 protein_coding retained_intron MGP_LPJ_T0020464.1 MGP_LPJ_G0016072.1 mouse_genomes_project 1 76311222 76318521 - MGP_LPJ_P0020464 Rnf25 protein_coding protein_coding MGP_LPJ_T0020465.1 MGP_LPJ_G0016072.1 mouse_genomes_project 1 76311898 76318556 - MGP_LPJ_P0020465 Rnf25 protein_coding protein_coding MGP_LPJ_T0020466.1 MGP_LPJ_G0016072.1 mouse_genomes_project 1 76316321 76319302 - MGP_LPJ_P0020466 Rnf25 protein_coding protein_coding MGP_LPJ_T0020467.1 MGP_LPJ_G0016072.1 mouse_genomes_project 1 76316508 76319351 - Rnf25 protein_coding retained_intron MGP_LPJ_T0020468.1 MGP_LPJ_G0016072.1 mouse_genomes_project 1 76316691 76319322 - MGP_LPJ_P0020468 Rnf25 protein_coding protein_coding MGP_LPJ_T0023108.1 MGP_LPJ_G0016613.1 mouse_genomes_project 1 172142626 172189311 - MGP_LPJ_P0023108 Mpzl1 protein_coding protein_coding MGP_LPJ_T0023109.1 MGP_LPJ_G0016613.1 mouse_genomes_project 1 172143764 172155196 - MGP_LPJ_P0023109 Mpzl1 protein_coding protein_coding MGP_LPJ_T0023110.1 MGP_LPJ_G0016613.1 mouse_genomes_project 1 172143803 172189431 - MGP_LPJ_P0023110 Mpzl1 protein_coding protein_coding MGP_LPJ_T0023111.1 MGP_LPJ_G0016613.1 mouse_genomes_project 1 172151227 172160017 - Mpzl1 protein_coding processed_transcript MGP_LPJ_T0023112.1 MGP_LPJ_G0016613.1 mouse_genomes_project 1 172153628 172155152 - Mpzl1 protein_coding retained_intron MGP_LPJ_T0023113.1 MGP_LPJ_G0016613.1 mouse_genomes_project 1 172155042 172163363 - Mpzl1 protein_coding processed_transcript MGP_LPJ_T0023114.1 MGP_LPJ_G0016613.1 mouse_genomes_project 1 172155110 172189360 - MGP_LPJ_P0023114 Mpzl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0023115.1 MGP_LPJ_G0016613.1 mouse_genomes_project 1 172157836 172189004 - Mpzl1 protein_coding processed_transcript MGP_LPJ_T0020396.1 MGP_LPJ_G0016062.1 mouse_genomes_project 1 75981516 75997081 - MGP_LPJ_P0020396 protein_coding unknown_likely_coding MGP_LPJ_T0020397.1 MGP_LPJ_G0016062.1 mouse_genomes_project 1 75981521 75997563 - protein_coding retained_intron MGP_LPJ_T0020398.1 MGP_LPJ_G0016062.1 mouse_genomes_project 1 75981521 75988970 - protein_coding retained_intron MGP_LPJ_T0020399.1 MGP_LPJ_G0016062.1 mouse_genomes_project 1 75982556 75984481 - MGP_LPJ_P0020399 protein_coding protein_coding MGP_LPJ_T0020400.1 MGP_LPJ_G0016062.1 mouse_genomes_project 1 75986815 75997427 - protein_coding processed_transcript MGP_LPJ_T0020401.1 MGP_LPJ_G0016062.1 mouse_genomes_project 1 75987163 75998834 - MGP_LPJ_P0020401 protein_coding protein_coding MGP_LPJ_T0020402.1 MGP_LPJ_G0016062.1 mouse_genomes_project 1 75987180 75997332 - MGP_LPJ_P0020402 protein_coding protein_coding MGP_LPJ_T0098752.1 MGP_LPJ_G0037015.1 mouse_genomes_project 1 69744236 69744330 - Gm25542 snRNA snRNA MGP_LPJ_T0006027.1 MGP_LPJ_G0005051.1 mouse_genomes_project 1 188805032 188807434 + Gm37406 lincRNA lincRNA MGP_LPJ_T0009508.1 MGP_LPJ_G0007626.1 mouse_genomes_project 1 64037170 64037275 + Gm44468 miRNA miRNA MGP_LPJ_T0012015.1 MGP_LPJ_G0010106.1 mouse_genomes_project 1 47672312 47673139 - processed_pseudogene processed_pseudogene MGP_LPJ_T0024143.1 MGP_LPJ_G0016857.1 mouse_genomes_project 1 199376049 199389118 - MGP_LPJ_P0024143 Atf3 protein_coding protein_coding MGP_LPJ_T0024144.1 MGP_LPJ_G0016857.1 mouse_genomes_project 1 199376049 199426068 - MGP_LPJ_P0024144 Atf3 protein_coding protein_coding MGP_LPJ_T0024145.1 MGP_LPJ_G0016857.1 mouse_genomes_project 1 199377178 199388886 - Atf3 protein_coding processed_transcript MGP_LPJ_T0000826.1 MGP_LPJ_G0000757.1 mouse_genomes_project 1 198025908 198029162 - TEC TEC MGP_LPJ_T0005708.1 MGP_LPJ_G0004804.1 mouse_genomes_project 1 35002224 35008822 + Gm33280 lincRNA lincRNA MGP_LPJ_T0011936.1 MGP_LPJ_G0010027.1 mouse_genomes_project 1 22156971 22157838 + processed_pseudogene processed_pseudogene MGP_LPJ_T0018988.1 MGP_LPJ_G0015788.1 mouse_genomes_project 1 18743913 18794214 + MGP_LPJ_P0018988 Paqr8 protein_coding protein_coding MGP_LPJ_T0018989.1 MGP_LPJ_G0015788.1 mouse_genomes_project 1 18771404 18793615 + MGP_LPJ_P0018989 Paqr8 protein_coding protein_coding MGP_LPJ_T0018990.1 MGP_LPJ_G0015788.1 mouse_genomes_project 1 18771438 18790316 + MGP_LPJ_P0018990 Paqr8 protein_coding protein_coding MGP_LPJ_T0018991.1 MGP_LPJ_G0015788.1 mouse_genomes_project 1 18777321 18790323 + MGP_LPJ_P0018991 Paqr8 protein_coding protein_coding MGP_LPJ_T0101725.1 MGP_LPJ_G0039763.1 mouse_genomes_project 1 180025187 180025487 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0019472.1 MGP_LPJ_G0015882.1 mouse_genomes_project 1 39596074 39622788 + MGP_LPJ_P0019472 Il18r1 protein_coding protein_coding MGP_LPJ_T0019473.1 MGP_LPJ_G0015882.1 mouse_genomes_project 1 39596198 39622790 + MGP_LPJ_P0019473 Il18r1 protein_coding protein_coding MGP_LPJ_T0019474.1 MGP_LPJ_G0015882.1 mouse_genomes_project 1 39596492 39622788 + MGP_LPJ_P0019474 Il18r1 protein_coding protein_coding MGP_LPJ_T0019475.1 MGP_LPJ_G0015882.1 mouse_genomes_project 1 39596528 39632238 + MGP_LPJ_P0019475 Il18r1 protein_coding protein_coding MGP_LPJ_T0019476.1 MGP_LPJ_G0015882.1 mouse_genomes_project 1 39596528 39632239 + MGP_LPJ_P0019476 Il18r1 protein_coding protein_coding MGP_LPJ_T0019477.1 MGP_LPJ_G0015882.1 mouse_genomes_project 1 39596528 39632218 + MGP_LPJ_P0019477 Il18r1 protein_coding protein_coding MGP_LPJ_T0000608.1 MGP_LPJ_G0000543.1 mouse_genomes_project 1 99314657 99316951 + TEC TEC MGP_LPJ_T0022194.1 MGP_LPJ_G0016436.1 mouse_genomes_project 1 140128734 140138155 + MGP_LPJ_P0022194 Arl8a protein_coding protein_coding MGP_LPJ_T0022195.1 MGP_LPJ_G0016436.1 mouse_genomes_project 1 140129579 140138155 + MGP_LPJ_P0022195 Arl8a protein_coding protein_coding MGP_LPJ_T0022196.1 MGP_LPJ_G0016436.1 mouse_genomes_project 1 140133980 140136194 + Arl8a protein_coding retained_intron MGP_LPJ_T0022197.1 MGP_LPJ_G0016436.1 mouse_genomes_project 1 140136080 140137214 + Arl8a protein_coding retained_intron MGP_LPJ_T0099971.1 MGP_LPJ_G0038234.1 mouse_genomes_project 1 38601738 38601953 + Gm24826 snoRNA snoRNA MGP_LPJ_T0000432.1 MGP_LPJ_G0000370.1 mouse_genomes_project 1 19126593 19128680 + TEC TEC MGP_LPJ_T0006020.1 MGP_LPJ_G0005045.1 mouse_genomes_project 1 184964284 184969788 - Gm37280 lincRNA lincRNA MGP_LPJ_T0006061.1 MGP_LPJ_G0005074.1 mouse_genomes_project 1 193644840 193658981 + Gm38093 lincRNA lincRNA MGP_LPJ_T0000504.1 MGP_LPJ_G0000439.1 mouse_genomes_project 1 52654926 52656841 - TEC TEC MGP_LPJ_T0000429.1 MGP_LPJ_G0000367.1 mouse_genomes_project 1 14652869 14653696 + TEC TEC MGP_LPJ_T0005885.1 MGP_LPJ_G0004937.1 mouse_genomes_project 1 110904981 110907193 - Gm15391 lincRNA lincRNA MGP_LPJ_T0000582.1 MGP_LPJ_G0000517.1 mouse_genomes_project 1 88960136 88961311 + TEC TEC MGP_LPJ_T0022925.1 MGP_LPJ_G0016571.1 mouse_genomes_project 1 167878452 167889087 + MGP_LPJ_P0022925 Tnfsf18 protein_coding protein_coding MGP_LPJ_T0002832.1 MGP_LPJ_G0002686.1 mouse_genomes_project 1 58634529 58641811 - Gm17234 antisense antisense MGP_LPJ_T0022792.1 MGP_LPJ_G0016550.1 mouse_genomes_project 1 163612249 163649081 + MGP_LPJ_P0022792 BC026585 protein_coding protein_coding MGP_LPJ_T0022793.1 MGP_LPJ_G0016550.1 mouse_genomes_project 1 163612268 163648964 + MGP_LPJ_P0022793 BC026585 protein_coding protein_coding MGP_LPJ_T0022794.1 MGP_LPJ_G0016550.1 mouse_genomes_project 1 163618188 163626933 + MGP_LPJ_P0022794 BC026585 protein_coding protein_coding MGP_LPJ_T0022795.1 MGP_LPJ_G0016550.1 mouse_genomes_project 1 163628514 163653117 + MGP_LPJ_P0022795 BC026585 protein_coding nonsense_mediated_decay MGP_LPJ_T0019305.1 MGP_LPJ_G0015849.1 mouse_genomes_project 1 36169028 36199168 + MGP_LPJ_P0019305 Cnga3 protein_coding protein_coding MGP_LPJ_T0019306.1 MGP_LPJ_G0015849.1 mouse_genomes_project 1 36172973 36222081 + MGP_LPJ_P0019306 Cnga3 protein_coding protein_coding MGP_LPJ_T0019307.1 MGP_LPJ_G0015849.1 mouse_genomes_project 1 36172973 36222081 + MGP_LPJ_P0019307 Cnga3 protein_coding protein_coding MGP_LPJ_T0019308.1 MGP_LPJ_G0015849.1 mouse_genomes_project 1 36173799 36223281 + MGP_LPJ_P0019308 Cnga3 protein_coding protein_coding MGP_LPJ_T0005950.1 MGP_LPJ_G0004988.1 mouse_genomes_project 1 144019770 144020432 - 1700019P21Rik lincRNA lincRNA MGP_LPJ_T0006044.1 MGP_LPJ_G0005063.1 mouse_genomes_project 1 192186034 192219465 + Gm37223 lincRNA lincRNA MGP_LPJ_T0006045.1 MGP_LPJ_G0005063.1 mouse_genomes_project 1 192186034 192219494 + Gm37223 lincRNA lincRNA MGP_LPJ_T0006046.1 MGP_LPJ_G0005063.1 mouse_genomes_project 1 192186034 192219497 + Gm37223 lincRNA lincRNA MGP_LPJ_T0006047.1 MGP_LPJ_G0005063.1 mouse_genomes_project 1 192186038 192223208 + Gm37223 lincRNA lincRNA MGP_LPJ_T0006048.1 MGP_LPJ_G0005063.1 mouse_genomes_project 1 192186049 192223236 + Gm37223 lincRNA lincRNA MGP_LPJ_T0006050.1 MGP_LPJ_G0005063.1 mouse_genomes_project 1 192211615 192223208 + Gm37223 lincRNA lincRNA MGP_LPJ_T0022349.1 MGP_LPJ_G0016466.1 mouse_genomes_project 1 143624741 143703835 - MGP_LPJ_P0022349 Nek7 protein_coding protein_coding MGP_LPJ_T0022350.1 MGP_LPJ_G0016466.1 mouse_genomes_project 1 143653182 143760484 - Nek7 protein_coding retained_intron MGP_LPJ_T0098365.1 MGP_LPJ_G0036646.1 mouse_genomes_project 1 45149130 45149333 + Gm23984 ribozyme ribozyme MGP_LPJ_T0101743.1 MGP_LPJ_G0039781.1 mouse_genomes_project 1 189201386 189202064 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0021466.1 MGP_LPJ_G0016278.1 mouse_genomes_project 1 100762462 100772605 - Ppip5k2 protein_coding retained_intron MGP_LPJ_T0021467.1 MGP_LPJ_G0016278.1 mouse_genomes_project 1 100762462 100834384 - MGP_LPJ_P0021467 Ppip5k2 protein_coding protein_coding MGP_LPJ_T0021468.1 MGP_LPJ_G0016278.1 mouse_genomes_project 1 100762462 100834384 - MGP_LPJ_P0021468 Ppip5k2 protein_coding protein_coding MGP_LPJ_T0021469.1 MGP_LPJ_G0016278.1 mouse_genomes_project 1 100762569 100833917 - MGP_LPJ_P0021469 Ppip5k2 protein_coding unknown_likely_coding MGP_LPJ_T0021470.1 MGP_LPJ_G0016278.1 mouse_genomes_project 1 100764079 100825565 - MGP_LPJ_P0021470 Ppip5k2 protein_coding protein_coding MGP_LPJ_T0021471.1 MGP_LPJ_G0016278.1 mouse_genomes_project 1 100768889 100773981 - MGP_LPJ_P0021471 Ppip5k2 protein_coding protein_coding MGP_LPJ_T0021472.1 MGP_LPJ_G0016278.1 mouse_genomes_project 1 100776216 100779209 - Ppip5k2 protein_coding retained_intron MGP_LPJ_T0021473.1 MGP_LPJ_G0016278.1 mouse_genomes_project 1 100801925 100805898 - Ppip5k2 protein_coding retained_intron MGP_LPJ_T0005954.1 MGP_LPJ_G0004992.1 mouse_genomes_project 1 155011459 155048166 - Gm29398 lincRNA lincRNA MGP_LPJ_T0005955.1 MGP_LPJ_G0004992.1 mouse_genomes_project 1 155018498 155048165 - Gm29398 lincRNA lincRNA MGP_LPJ_T0020119.1 MGP_LPJ_G0016003.1 mouse_genomes_project 1 64307125 64349063 + MGP_LPJ_P0020119 Zdbf2 protein_coding protein_coding MGP_LPJ_T0020120.1 MGP_LPJ_G0016003.1 mouse_genomes_project 1 64307129 64329718 + MGP_LPJ_P0020120 Zdbf2 protein_coding protein_coding MGP_LPJ_T0020121.1 MGP_LPJ_G0016003.1 mouse_genomes_project 1 64325271 64349062 + MGP_LPJ_P0020121 Zdbf2 protein_coding protein_coding MGP_LPJ_T0011928.1 MGP_LPJ_G0010019.1 mouse_genomes_project 1 19327726 19327922 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098814.1 MGP_LPJ_G0037077.1 mouse_genomes_project 1 200031656 200031770 - Gm26203 snRNA snRNA MGP_LPJ_T0011943.1 MGP_LPJ_G0010034.1 mouse_genomes_project 1 25548129 25548546 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011991.1 MGP_LPJ_G0010082.1 mouse_genomes_project 1 42735554 42735934 + processed_pseudogene processed_pseudogene MGP_LPJ_T0019714.1 MGP_LPJ_G0015928.1 mouse_genomes_project 1 53024963 53032037 + MGP_LPJ_P0019714 Mstn protein_coding protein_coding MGP_LPJ_T0019715.1 MGP_LPJ_G0015928.1 mouse_genomes_project 1 53024980 53032003 + MGP_LPJ_P0019715 Mstn protein_coding protein_coding MGP_LPJ_T0005838.1 MGP_LPJ_G0004895.1 mouse_genomes_project 1 88312112 88327897 - Gm28100 lincRNA lincRNA MGP_LPJ_T0023263.1 MGP_LPJ_G0016651.1 mouse_genomes_project 1 177738723 177753160 - MGP_LPJ_P0023263 Dusp12 protein_coding nonsense_mediated_decay MGP_LPJ_T0023264.1 MGP_LPJ_G0016651.1 mouse_genomes_project 1 177739409 177753098 - MGP_LPJ_P0023264 Dusp12 protein_coding nonsense_mediated_decay MGP_LPJ_T0023265.1 MGP_LPJ_G0016651.1 mouse_genomes_project 1 177739409 177753243 - MGP_LPJ_P0023265 Dusp12 protein_coding protein_coding MGP_LPJ_T0023266.1 MGP_LPJ_G0016651.1 mouse_genomes_project 1 177739409 177752902 - MGP_LPJ_P0023266 Dusp12 protein_coding protein_coding MGP_LPJ_T0023267.1 MGP_LPJ_G0016651.1 mouse_genomes_project 1 177739410 177753110 - MGP_LPJ_P0023267 Dusp12 protein_coding nonsense_mediated_decay MGP_LPJ_T0023268.1 MGP_LPJ_G0016651.1 mouse_genomes_project 1 177739741 177753099 - MGP_LPJ_P0023268 Dusp12 protein_coding nonsense_mediated_decay MGP_LPJ_T0023269.1 MGP_LPJ_G0016651.1 mouse_genomes_project 1 177745876 177752707 - MGP_LPJ_P0023269 Dusp12 protein_coding protein_coding MGP_LPJ_T0021819.1 MGP_LPJ_G0016350.1 mouse_genomes_project 1 133204361 133209277 - MGP_LPJ_P0021819 Cxcr4 protein_coding protein_coding MGP_LPJ_T0021820.1 MGP_LPJ_G0016350.1 mouse_genomes_project 1 133206102 133209280 - MGP_LPJ_P0021820 Cxcr4 protein_coding protein_coding MGP_LPJ_T0023967.1 MGP_LPJ_G0016821.1 mouse_genomes_project 1 191264295 191264954 + Hhipl2 protein_coding processed_transcript MGP_LPJ_T0023968.1 MGP_LPJ_G0016821.1 mouse_genomes_project 1 191264351 191284626 + MGP_LPJ_P0023968 Hhipl2 protein_coding protein_coding MGP_LPJ_T0023969.1 MGP_LPJ_G0016821.1 mouse_genomes_project 1 191264586 191284947 + MGP_LPJ_P0023969 Hhipl2 protein_coding protein_coding MGP_LPJ_T0023970.1 MGP_LPJ_G0016821.1 mouse_genomes_project 1 191264683 191269790 + Hhipl2 protein_coding processed_transcript MGP_LPJ_T0005749.1 MGP_LPJ_G0004829.1 mouse_genomes_project 1 51426221 51427221 - 1700072G22Rik lincRNA lincRNA MGP_LPJ_T0012176.1 MGP_LPJ_G0010267.1 mouse_genomes_project 1 110753530 110757951 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000464.1 MGP_LPJ_G0000400.1 mouse_genomes_project 1 31057114 31058659 + TEC TEC MGP_LPJ_T0011962.1 MGP_LPJ_G0010053.1 mouse_genomes_project 1 32043072 32045328 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012321.1 MGP_LPJ_G0010412.1 mouse_genomes_project 1 173364636 173368727 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011907.1 MGP_LPJ_G0009998.1 mouse_genomes_project 1 13433821 13433921 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005712.1 MGP_LPJ_G0004808.1 mouse_genomes_project 1 38111074 38120952 - Gm37821 lincRNA lincRNA MGP_LPJ_T0000516.1 MGP_LPJ_G0000451.1 mouse_genomes_project 1 60517119 60518991 - TEC TEC MGP_LPJ_T0022746.1 MGP_LPJ_G0016543.1 mouse_genomes_project 1 162652082 162721140 + MGP_LPJ_P0022746 Abl2 protein_coding protein_coding MGP_LPJ_T0022747.1 MGP_LPJ_G0016543.1 mouse_genomes_project 1 162652283 162745292 + MGP_LPJ_P0022747 Abl2 protein_coding protein_coding MGP_LPJ_T0022748.1 MGP_LPJ_G0016543.1 mouse_genomes_project 1 162652345 162738443 + MGP_LPJ_P0022748 Abl2 protein_coding protein_coding MGP_LPJ_T0022749.1 MGP_LPJ_G0016543.1 mouse_genomes_project 1 162711726 162725641 + MGP_LPJ_P0022749 Abl2 protein_coding protein_coding MGP_LPJ_T0000588.1 MGP_LPJ_G0000523.1 mouse_genomes_project 1 89295873 89300564 + TEC TEC MGP_LPJ_T0009529.1 MGP_LPJ_G0007647.1 mouse_genomes_project 1 88710333 88710480 - Mir3535 miRNA miRNA MGP_LPJ_T0005908.1 MGP_LPJ_G0004955.1 mouse_genomes_project 1 125256120 125290848 + Celrr lincRNA lincRNA MGP_LPJ_T0005909.1 MGP_LPJ_G0004955.1 mouse_genomes_project 1 125256186 125287617 + Celrr lincRNA lincRNA MGP_LPJ_T0005910.1 MGP_LPJ_G0004955.1 mouse_genomes_project 1 125256189 125354238 + Celrr lincRNA lincRNA MGP_LPJ_T0005911.1 MGP_LPJ_G0004955.1 mouse_genomes_project 1 125256244 125257648 + Celrr lincRNA lincRNA MGP_LPJ_T0098084.1 MGP_LPJ_G0036365.1 mouse_genomes_project 1 84670784 84670882 + n-R5s213 rRNA rRNA MGP_LPJ_T0006032.1 MGP_LPJ_G0005054.1 mouse_genomes_project 1 189594668 189604284 + lincRNA lincRNA MGP_LPJ_T0006033.1 MGP_LPJ_G0005054.1 mouse_genomes_project 1 189597554 189604262 + lincRNA lincRNA MGP_LPJ_T0006034.1 MGP_LPJ_G0005054.1 mouse_genomes_project 1 189603000 189605317 + lincRNA lincRNA MGP_LPJ_T0012310.1 MGP_LPJ_G0010401.1 mouse_genomes_project 1 170225857 170226899 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000416.1 MGP_LPJ_G0000354.1 mouse_genomes_project 1 10846624 10847320 - TEC TEC MGP_LPJ_T0005819.1 MGP_LPJ_G0004880.1 mouse_genomes_project 1 78251792 78264087 + Gm17751 lincRNA lincRNA MGP_LPJ_T0005820.1 MGP_LPJ_G0004880.1 mouse_genomes_project 1 78251792 78264671 + Gm17751 lincRNA lincRNA MGP_LPJ_T0022591.1 MGP_LPJ_G0016514.1 mouse_genomes_project 1 159373258 159401436 + MGP_LPJ_P0022591 Shcbp1l protein_coding protein_coding MGP_LPJ_T0022592.1 MGP_LPJ_G0016514.1 mouse_genomes_project 1 159373268 159388790 + MGP_LPJ_P0022592 Shcbp1l protein_coding nonsense_mediated_decay MGP_LPJ_T0022593.1 MGP_LPJ_G0016514.1 mouse_genomes_project 1 159394208 159397859 + Shcbp1l protein_coding retained_intron MGP_LPJ_T0020137.1 MGP_LPJ_G0016007.1 mouse_genomes_project 1 64792602 64818127 + MGP_LPJ_P0020137 Fastkd2 protein_coding protein_coding MGP_LPJ_T0020138.1 MGP_LPJ_G0016007.1 mouse_genomes_project 1 64792629 64798781 + Fastkd2 protein_coding retained_intron MGP_LPJ_T0020139.1 MGP_LPJ_G0016007.1 mouse_genomes_project 1 64792631 64816010 + Fastkd2 protein_coding retained_intron MGP_LPJ_T0020140.1 MGP_LPJ_G0016007.1 mouse_genomes_project 1 64798647 64811531 + Fastkd2 protein_coding processed_transcript MGP_LPJ_T0020141.1 MGP_LPJ_G0016007.1 mouse_genomes_project 1 64811494 64813749 + Fastkd2 protein_coding retained_intron MGP_LPJ_T0020142.1 MGP_LPJ_G0016007.1 mouse_genomes_project 1 64814693 64815937 + Fastkd2 protein_coding processed_transcript MGP_LPJ_T0098749.1 MGP_LPJ_G0037012.1 mouse_genomes_project 1 66089166 66089322 - Gm24788 snRNA snRNA MGP_LPJ_T0011266.1 MGP_LPJ_G0009384.1 mouse_genomes_project 1 76489432 76489525 + Gm27507 misc_RNA misc_RNA MGP_LPJ_T0020742.1 MGP_LPJ_G0016116.1 mouse_genomes_project 1 80529803 80583537 + MGP_LPJ_P0020742 Acsl3 protein_coding protein_coding MGP_LPJ_T0020743.1 MGP_LPJ_G0016116.1 mouse_genomes_project 1 80529861 80582761 + MGP_LPJ_P0020743 Acsl3 protein_coding protein_coding MGP_LPJ_T0020746.1 MGP_LPJ_G0016116.1 mouse_genomes_project 1 80546305 80564717 + MGP_LPJ_P0020746 Acsl3 protein_coding protein_coding MGP_LPJ_T0020747.1 MGP_LPJ_G0016116.1 mouse_genomes_project 1 80548683 80582209 + MGP_LPJ_P0020747 Acsl3 protein_coding protein_coding MGP_LPJ_T0020748.1 MGP_LPJ_G0016116.1 mouse_genomes_project 1 80557371 80568638 + Acsl3 protein_coding retained_intron MGP_LPJ_T0020749.1 MGP_LPJ_G0016116.1 mouse_genomes_project 1 80566697 80572829 + Acsl3 protein_coding retained_intron MGP_LPJ_T0020750.1 MGP_LPJ_G0016116.1 mouse_genomes_project 1 80572455 80577083 + Acsl3 protein_coding retained_intron MGP_LPJ_T0019995.1 MGP_LPJ_G0015984.1 mouse_genomes_project 1 60559481 60567177 + Nop58 protein_coding processed_transcript MGP_LPJ_T0019996.1 MGP_LPJ_G0015984.1 mouse_genomes_project 1 60559487 60587474 + MGP_LPJ_P0019996 Nop58 protein_coding protein_coding MGP_LPJ_T0019997.1 MGP_LPJ_G0015984.1 mouse_genomes_project 1 60559495 60571976 + MGP_LPJ_P0019997 Nop58 protein_coding protein_coding MGP_LPJ_T0019998.1 MGP_LPJ_G0015984.1 mouse_genomes_project 1 60559513 60567199 + Nop58 protein_coding retained_intron MGP_LPJ_T0019999.1 MGP_LPJ_G0015984.1 mouse_genomes_project 1 60559516 60565500 + Nop58 protein_coding retained_intron MGP_LPJ_T0020000.1 MGP_LPJ_G0015984.1 mouse_genomes_project 1 60559519 60596116 + MGP_LPJ_P0020000 Nop58 protein_coding protein_coding MGP_LPJ_T0020001.1 MGP_LPJ_G0015984.1 mouse_genomes_project 1 60559531 60571951 + MGP_LPJ_P0020001 Nop58 protein_coding protein_coding MGP_LPJ_T0020002.1 MGP_LPJ_G0015984.1 mouse_genomes_project 1 60559564 60574321 + MGP_LPJ_P0020002 Nop58 protein_coding nonsense_mediated_decay MGP_LPJ_T0020003.1 MGP_LPJ_G0015984.1 mouse_genomes_project 1 60564689 60574285 + Nop58 protein_coding retained_intron MGP_LPJ_T0020004.1 MGP_LPJ_G0015984.1 mouse_genomes_project 1 60566954 60580108 + Nop58 protein_coding retained_intron MGP_LPJ_T0020005.1 MGP_LPJ_G0015984.1 mouse_genomes_project 1 60571925 60580060 + MGP_LPJ_P0020005 Nop58 protein_coding nonsense_mediated_decay MGP_LPJ_T0020006.1 MGP_LPJ_G0015984.1 mouse_genomes_project 1 60574314 60583028 + MGP_LPJ_P0020006 Nop58 protein_coding nonsense_mediated_decay MGP_LPJ_T0020007.1 MGP_LPJ_G0015984.1 mouse_genomes_project 1 60580057 60585063 + MGP_LPJ_P0020007 Nop58 protein_coding nonsense_mediated_decay MGP_LPJ_T0020008.1 MGP_LPJ_G0015984.1 mouse_genomes_project 1 60580096 60587243 + MGP_LPJ_P0020008 Nop58 protein_coding protein_coding MGP_LPJ_T0020009.1 MGP_LPJ_G0015984.1 mouse_genomes_project 1 60580607 60587244 + MGP_LPJ_P0020009 Nop58 protein_coding protein_coding MGP_LPJ_T0023512.1 MGP_LPJ_G0016702.1 mouse_genomes_project 1 179291239 179324248 + MGP_LPJ_P0023512 Kcnj10 protein_coding protein_coding MGP_LPJ_T0018678.1 MGP_LPJ_G0015730.1 mouse_genomes_project 1 2077755 2122631 + MGP_LPJ_P0018678 Tcea1 protein_coding protein_coding MGP_LPJ_T0018679.1 MGP_LPJ_G0015730.1 mouse_genomes_project 1 2077979 2122635 + MGP_LPJ_P0018679 Tcea1 protein_coding protein_coding MGP_LPJ_T0022446.1 MGP_LPJ_G0016488.1 mouse_genomes_project 1 150134183 150158015 - MGP_LPJ_P0022446 Rgs18 protein_coding protein_coding MGP_LPJ_T0021251.1 MGP_LPJ_G0016226.1 mouse_genomes_project 1 94131187 94174091 - MGP_LPJ_P0021251 Per2 protein_coding protein_coding MGP_LPJ_T0021252.1 MGP_LPJ_G0016226.1 mouse_genomes_project 1 94162471 94164605 - Per2 protein_coding processed_transcript MGP_LPJ_T0011875.1 MGP_LPJ_G0009966.1 mouse_genomes_project 1 4210972 4211625 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005980.1 MGP_LPJ_G0005012.1 mouse_genomes_project 1 166359686 166362870 - 4930562F07Rik lincRNA lincRNA MGP_LPJ_T0005981.1 MGP_LPJ_G0005012.1 mouse_genomes_project 1 166359686 166362937 - 4930562F07Rik lincRNA lincRNA MGP_LPJ_T0005982.1 MGP_LPJ_G0005012.1 mouse_genomes_project 1 166359921 166362894 - 4930562F07Rik lincRNA lincRNA MGP_LPJ_T0009544.1 MGP_LPJ_G0007662.1 mouse_genomes_project 1 132781879 132781949 + Mir128-1 miRNA miRNA MGP_LPJ_T0000825.1 MGP_LPJ_G0000756.1 mouse_genomes_project 1 197731217 197732102 - TEC TEC MGP_LPJ_T0020736.1 MGP_LPJ_G0016115.1 mouse_genomes_project 1 80375705 80393847 + MGP_LPJ_P0020736 Mogat1 protein_coding protein_coding MGP_LPJ_T0020737.1 MGP_LPJ_G0016115.1 mouse_genomes_project 1 80375874 80395387 + MGP_LPJ_P0020737 Mogat1 protein_coding protein_coding MGP_LPJ_T0020738.1 MGP_LPJ_G0016115.1 mouse_genomes_project 1 80375883 80404247 + MGP_LPJ_P0020738 Mogat1 protein_coding protein_coding MGP_LPJ_T0020739.1 MGP_LPJ_G0016115.1 mouse_genomes_project 1 80376527 80389005 + MGP_LPJ_P0020739 Mogat1 protein_coding protein_coding MGP_LPJ_T0020740.1 MGP_LPJ_G0016115.1 mouse_genomes_project 1 80376582 80404249 + MGP_LPJ_P0020740 Mogat1 protein_coding protein_coding MGP_LPJ_T0020741.1 MGP_LPJ_G0016115.1 mouse_genomes_project 1 80403703 80404249 + Mogat1 protein_coding processed_transcript MGP_LPJ_T0000531.1 MGP_LPJ_G0000466.1 mouse_genomes_project 1 63820301 63822849 + TEC TEC MGP_LPJ_T0021150.1 MGP_LPJ_G0016208.1 mouse_genomes_project 1 92550010 92620395 - MGP_LPJ_P0021150 Asb18 protein_coding protein_coding MGP_LPJ_T0021151.1 MGP_LPJ_G0016208.1 mouse_genomes_project 1 92552192 92620366 - MGP_LPJ_P0021151 Asb18 protein_coding protein_coding MGP_LPJ_T0021152.1 MGP_LPJ_G0016208.1 mouse_genomes_project 1 92552279 92620277 - MGP_LPJ_P0021152 Asb18 protein_coding nonsense_mediated_decay MGP_LPJ_T0021153.1 MGP_LPJ_G0016208.1 mouse_genomes_project 1 92552280 92620277 - MGP_LPJ_P0021153 Asb18 protein_coding nonsense_mediated_decay MGP_LPJ_T0011253.1 MGP_LPJ_G0009371.1 mouse_genomes_project 1 7649748 7649988 + Gm26348 misc_RNA misc_RNA MGP_LPJ_T0018956.1 MGP_LPJ_G0015777.1 mouse_genomes_project 1 15348175 15377146 + MGP_LPJ_P0018956 Pi15 protein_coding protein_coding MGP_LPJ_T0002821.1 MGP_LPJ_G0002677.1 mouse_genomes_project 1 42368655 42369522 + Gm28782 antisense antisense MGP_LPJ_T0005675.1 MGP_LPJ_G0004774.1 mouse_genomes_project 1 10186680 10187533 - Gm29663 lincRNA lincRNA MGP_LPJ_T0019242.1 MGP_LPJ_G0015838.1 mouse_genomes_project 1 35371644 35409234 + MGP_LPJ_P0019242 Cnnm4 protein_coding protein_coding MGP_LPJ_T0019243.1 MGP_LPJ_G0015838.1 mouse_genomes_project 1 35371985 35373357 + Cnnm4 protein_coding retained_intron MGP_LPJ_T0024123.1 MGP_LPJ_G0016852.1 mouse_genomes_project 1 199228318 199234113 + MGP_LPJ_P0024123 Spata45 protein_coding protein_coding MGP_LPJ_T0024124.1 MGP_LPJ_G0016852.1 mouse_genomes_project 1 199228498 199234120 + MGP_LPJ_P0024124 Spata45 protein_coding protein_coding MGP_LPJ_T0024018.1 MGP_LPJ_G0016833.1 mouse_genomes_project 1 193343149 193356996 + MGP_LPJ_P0024018 Slc30a10 protein_coding protein_coding MGP_LPJ_T0100017.1 MGP_LPJ_G0038280.1 mouse_genomes_project 1 137629924 137630045 - Gm22609 snoRNA snoRNA MGP_LPJ_T0000449.1 MGP_LPJ_G0000385.1 mouse_genomes_project 1 23767592 23771576 - TEC TEC MGP_LPJ_T0021289.1 MGP_LPJ_G0016235.1 mouse_genomes_project 1 95350218 95351300 + MGP_LPJ_P0021289 Olfr1413 protein_coding protein_coding MGP_LPJ_T0002945.1 MGP_LPJ_G0002771.1 mouse_genomes_project 1 164688969 164761412 - Gm37679 antisense antisense MGP_LPJ_T0019025.1 MGP_LPJ_G0015799.1 mouse_genomes_project 1 21791253 21842290 + MGP_LPJ_P0019025 B3gat2 protein_coding protein_coding MGP_LPJ_T0019026.1 MGP_LPJ_G0015799.1 mouse_genomes_project 1 21791877 21873058 + MGP_LPJ_P0019026 B3gat2 protein_coding protein_coding MGP_LPJ_T0009542.1 MGP_LPJ_G0007660.1 mouse_genomes_project 1 120334414 120334486 - Gm23393 miRNA miRNA MGP_LPJ_T0000426.1 MGP_LPJ_G0000364.1 mouse_genomes_project 1 13533637 13536824 + TEC TEC MGP_LPJ_T0101732.1 MGP_LPJ_G0039770.1 mouse_genomes_project 1 181227322 181227788 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0011982.1 MGP_LPJ_G0010073.1 mouse_genomes_project 1 36451997 36453787 - processed_pseudogene processed_pseudogene MGP_LPJ_T0022720.1 MGP_LPJ_G0016538.1 mouse_genomes_project 1 162179749 162265696 - MGP_LPJ_P0022720 Fam163a protein_coding protein_coding MGP_LPJ_T0101675.1 MGP_LPJ_G0039713.1 mouse_genomes_project 1 15764879 15776311 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0023533.1 MGP_LPJ_G0016707.1 mouse_genomes_project 1 179475439 179479048 + Cfap45 protein_coding retained_intron MGP_LPJ_T0023534.1 MGP_LPJ_G0016707.1 mouse_genomes_project 1 179475682 179500604 + MGP_LPJ_P0023534 Cfap45 protein_coding protein_coding MGP_LPJ_T0023535.1 MGP_LPJ_G0016707.1 mouse_genomes_project 1 179475774 179487477 + Cfap45 protein_coding retained_intron MGP_LPJ_T0023536.1 MGP_LPJ_G0016707.1 mouse_genomes_project 1 179475777 179487371 + MGP_LPJ_P0023536 Cfap45 protein_coding protein_coding MGP_LPJ_T0023537.1 MGP_LPJ_G0016707.1 mouse_genomes_project 1 179475819 179487348 + MGP_LPJ_P0023537 Cfap45 protein_coding protein_coding MGP_LPJ_T0023538.1 MGP_LPJ_G0016707.1 mouse_genomes_project 1 179480869 179487431 + MGP_LPJ_P0023538 Cfap45 protein_coding protein_coding MGP_LPJ_T0023539.1 MGP_LPJ_G0016707.1 mouse_genomes_project 1 179481230 179487431 + MGP_LPJ_P0023539 Cfap45 protein_coding protein_coding MGP_LPJ_T0023540.1 MGP_LPJ_G0016707.1 mouse_genomes_project 1 179492362 179495335 + MGP_LPJ_P0023540 Cfap45 protein_coding protein_coding MGP_LPJ_T0000546.1 MGP_LPJ_G0000481.1 mouse_genomes_project 1 70137910 70141185 - TEC TEC MGP_LPJ_T0000633.1 MGP_LPJ_G0000568.1 mouse_genomes_project 1 127657525 127660533 - TEC TEC MGP_LPJ_T0020971.1 MGP_LPJ_G0016166.1 mouse_genomes_project 1 88921059 88962605 - Pde6d protein_coding retained_intron MGP_LPJ_T0020972.1 MGP_LPJ_G0016166.1 mouse_genomes_project 1 88921059 88962605 - MGP_LPJ_P0020972 Pde6d protein_coding protein_coding MGP_LPJ_T0020973.1 MGP_LPJ_G0016166.1 mouse_genomes_project 1 88921087 88962687 - MGP_LPJ_P0020973 Pde6d protein_coding nonsense_mediated_decay MGP_LPJ_T0020974.1 MGP_LPJ_G0016166.1 mouse_genomes_project 1 88921585 88962575 - Pde6d protein_coding processed_transcript MGP_LPJ_T0020975.1 MGP_LPJ_G0016166.1 mouse_genomes_project 1 88923457 88962605 - MGP_LPJ_P0020975 Pde6d protein_coding protein_coding MGP_LPJ_T0000539.1 MGP_LPJ_G0000474.1 mouse_genomes_project 1 68017235 68019416 + TEC TEC MGP_LPJ_T0021001.1 MGP_LPJ_G0016175.1 mouse_genomes_project 1 89591334 89592494 + Chrnd protein_coding retained_intron MGP_LPJ_T0021002.1 MGP_LPJ_G0016175.1 mouse_genomes_project 1 89591364 89600639 + MGP_LPJ_P0021002 Chrnd protein_coding protein_coding MGP_LPJ_T0021003.1 MGP_LPJ_G0016175.1 mouse_genomes_project 1 89591571 89600638 + MGP_LPJ_P0021003 Chrnd protein_coding protein_coding MGP_LPJ_T0018875.1 MGP_LPJ_G0015759.1 mouse_genomes_project 1 11187581 11224698 - MGP_LPJ_P0018875 Lactb2 protein_coding protein_coding MGP_LPJ_T0018876.1 MGP_LPJ_G0015759.1 mouse_genomes_project 1 11194247 11202652 - Lactb2 protein_coding retained_intron MGP_LPJ_T0100040.1 MGP_LPJ_G0038303.1 mouse_genomes_project 1 167379220 167379296 + Gm25789 snoRNA snoRNA MGP_LPJ_T0000441.1 MGP_LPJ_G0000377.1 mouse_genomes_project 1 23378511 23381029 - TEC TEC MGP_LPJ_T0019173.1 MGP_LPJ_G0015827.1 mouse_genomes_project 1 33330428 33344348 + MGP_LPJ_P0019173 Amer3 protein_coding protein_coding MGP_LPJ_T0019798.1 MGP_LPJ_G0015948.1 mouse_genomes_project 1 55722764 55780575 - MGP_LPJ_P0019798 Rftn2 protein_coding protein_coding MGP_LPJ_T0019799.1 MGP_LPJ_G0015948.1 mouse_genomes_project 1 55724353 55780575 - MGP_LPJ_P0019799 Rftn2 protein_coding nonsense_mediated_decay MGP_LPJ_T0019800.1 MGP_LPJ_G0015948.1 mouse_genomes_project 1 55755821 55780575 - MGP_LPJ_P0019800 Rftn2 protein_coding protein_coding MGP_LPJ_T0019801.1 MGP_LPJ_G0015948.1 mouse_genomes_project 1 55758115 55760421 - Rftn2 protein_coding processed_transcript MGP_LPJ_T0019802.1 MGP_LPJ_G0015948.1 mouse_genomes_project 1 55777734 55780575 - Rftn2 protein_coding processed_transcript MGP_LPJ_T0011859.1 MGP_LPJ_G0009950.1 mouse_genomes_project 1 700571 701497 + processed_pseudogene processed_pseudogene MGP_LPJ_T0020548.1 MGP_LPJ_G0016090.1 mouse_genomes_project 1 76867017 76878084 - MGP_LPJ_P0020548 Atg9a protein_coding protein_coding MGP_LPJ_T0020549.1 MGP_LPJ_G0016090.1 mouse_genomes_project 1 76867022 76878354 - MGP_LPJ_P0020549 Atg9a protein_coding protein_coding MGP_LPJ_T0020550.1 MGP_LPJ_G0016090.1 mouse_genomes_project 1 76867022 76878081 - MGP_LPJ_P0020550 Atg9a protein_coding nonsense_mediated_decay MGP_LPJ_T0020551.1 MGP_LPJ_G0016090.1 mouse_genomes_project 1 76867022 76876540 - MGP_LPJ_P0020551 Atg9a protein_coding protein_coding MGP_LPJ_T0020552.1 MGP_LPJ_G0016090.1 mouse_genomes_project 1 76867023 76878081 - MGP_LPJ_P0020552 Atg9a protein_coding protein_coding MGP_LPJ_T0020553.1 MGP_LPJ_G0016090.1 mouse_genomes_project 1 76869147 76872205 - MGP_LPJ_P0020553 Atg9a protein_coding protein_coding MGP_LPJ_T0020554.1 MGP_LPJ_G0016090.1 mouse_genomes_project 1 76873714 76877883 - Atg9a protein_coding retained_intron MGP_LPJ_T0020555.1 MGP_LPJ_G0016090.1 mouse_genomes_project 1 76875926 76878120 - Atg9a protein_coding retained_intron MGP_LPJ_T0020556.1 MGP_LPJ_G0016090.1 mouse_genomes_project 1 76876274 76877872 - MGP_LPJ_P0020556 Atg9a protein_coding protein_coding MGP_LPJ_T0018965.1 MGP_LPJ_G0015781.1 mouse_genomes_project 1 16036406 16049160 - MGP_LPJ_P0018965 Defb41 protein_coding protein_coding MGP_LPJ_T0018966.1 MGP_LPJ_G0015781.1 mouse_genomes_project 1 16044577 16049102 - MGP_LPJ_P0018966 Defb41 protein_coding protein_coding MGP_LPJ_T0021253.1 MGP_LPJ_G0016227.1 mouse_genomes_project 1 94205069 94238102 + MGP_LPJ_P0021253 Traf3ip1 protein_coding protein_coding MGP_LPJ_T0021254.1 MGP_LPJ_G0016227.1 mouse_genomes_project 1 94205116 94239480 + MGP_LPJ_P0021254 Traf3ip1 protein_coding protein_coding MGP_LPJ_T0021255.1 MGP_LPJ_G0016227.1 mouse_genomes_project 1 94228665 94239480 + Traf3ip1 protein_coding retained_intron MGP_LPJ_T0023416.1 MGP_LPJ_G0016680.1 mouse_genomes_project 1 178350383 178378254 + MGP_LPJ_P0023416 F11r protein_coding protein_coding MGP_LPJ_T0023417.1 MGP_LPJ_G0016680.1 mouse_genomes_project 1 178350427 178374261 + F11r protein_coding retained_intron MGP_LPJ_T0023418.1 MGP_LPJ_G0016680.1 mouse_genomes_project 1 178376508 178377303 + F11r protein_coding retained_intron MGP_LPJ_T0011970.1 MGP_LPJ_G0010061.1 mouse_genomes_project 1 33364339 33364574 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000386.1 MGP_LPJ_G0000324.1 mouse_genomes_project 1 539638 541871 - TEC TEC MGP_LPJ_T0098090.1 MGP_LPJ_G0036371.1 mouse_genomes_project 1 122687199 122687316 - Gm22094 rRNA rRNA MGP_LPJ_T0009523.1 MGP_LPJ_G0007641.1 mouse_genomes_project 1 84164172 84164276 + Mir6344 miRNA miRNA MGP_LPJ_T0000766.1 MGP_LPJ_G0000699.1 mouse_genomes_project 1 172135443 172136252 + TEC TEC MGP_LPJ_T0024214.1 MGP_LPJ_G0016872.1 mouse_genomes_project 1 201142762 201294352 - MGP_LPJ_P0024214 Syt14 protein_coding protein_coding MGP_LPJ_T0024215.1 MGP_LPJ_G0016872.1 mouse_genomes_project 1 201147515 201294239 - MGP_LPJ_P0024215 Syt14 protein_coding nonsense_mediated_decay MGP_LPJ_T0024216.1 MGP_LPJ_G0016872.1 mouse_genomes_project 1 201148739 201294294 - MGP_LPJ_P0024216 Syt14 protein_coding protein_coding MGP_LPJ_T0024217.1 MGP_LPJ_G0016872.1 mouse_genomes_project 1 201185559 201294221 - Syt14 protein_coding retained_intron MGP_LPJ_T0012030.1 MGP_LPJ_G0010121.1 mouse_genomes_project 1 51920805 51921217 - processed_pseudogene processed_pseudogene MGP_LPJ_T0020850.1 MGP_LPJ_G0016141.1 mouse_genomes_project 1 85331674 85486592 - MGP_LPJ_P0020850 Sphkap protein_coding protein_coding MGP_LPJ_T0020851.1 MGP_LPJ_G0016141.1 mouse_genomes_project 1 85332973 85486399 - MGP_LPJ_P0020851 Sphkap protein_coding unknown_likely_coding MGP_LPJ_T0020852.1 MGP_LPJ_G0016141.1 mouse_genomes_project 1 85332977 85357451 - MGP_LPJ_P0020852 Sphkap protein_coding protein_coding MGP_LPJ_T0020853.1 MGP_LPJ_G0016141.1 mouse_genomes_project 1 85343345 85486557 - Sphkap protein_coding retained_intron MGP_LPJ_T0020854.1 MGP_LPJ_G0016141.1 mouse_genomes_project 1 85414689 85486531 - Sphkap protein_coding retained_intron MGP_LPJ_T0020855.1 MGP_LPJ_G0016141.1 mouse_genomes_project 1 85455192 85486557 - Sphkap protein_coding retained_intron MGP_LPJ_T0098454.1 MGP_LPJ_G0036734.1 mouse_genomes_project 1 136139555 136141957 - Gm29488 sense_intronic sense_intronic MGP_LPJ_T0005901.1 MGP_LPJ_G0004949.1 mouse_genomes_project 1 124595592 124598243 + 1700012E03Rik lincRNA lincRNA MGP_LPJ_T0000771.1 MGP_LPJ_G0000704.1 mouse_genomes_project 1 175044379 175046655 - TEC TEC MGP_LPJ_T0099981.1 MGP_LPJ_G0038244.1 mouse_genomes_project 1 59901961 59902092 + Gm25502 snoRNA snoRNA MGP_LPJ_T0099960.1 MGP_LPJ_G0038223.1 mouse_genomes_project 1 15257946 15258057 + Gm25166 snoRNA snoRNA MGP_LPJ_T0023977.1 MGP_LPJ_G0016825.1 mouse_genomes_project 1 192634772 192663303 - MGP_LPJ_P0023977 Marc1 protein_coding protein_coding MGP_LPJ_T0023978.1 MGP_LPJ_G0016825.1 mouse_genomes_project 1 192635714 192663119 - MGP_LPJ_P0023978 Marc1 protein_coding protein_coding MGP_LPJ_T0012116.1 MGP_LPJ_G0010207.1 mouse_genomes_project 1 83753493 83754461 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023270.1 MGP_LPJ_G0016652.1 mouse_genomes_project 1 177752767 177753589 + MGP_LPJ_P0023270 Gm26620 protein_coding protein_coding MGP_LPJ_T0005968.1 MGP_LPJ_G0005003.1 mouse_genomes_project 1 160263628 160272455 - lincRNA lincRNA MGP_LPJ_T0021863.1 MGP_LPJ_G0016362.1 mouse_genomes_project 1 135579416 135595674 + MGP_LPJ_P0021863 Fcmr protein_coding protein_coding MGP_LPJ_T0021864.1 MGP_LPJ_G0016362.1 mouse_genomes_project 1 135579527 135590075 + Fcmr protein_coding processed_transcript MGP_LPJ_T0021865.1 MGP_LPJ_G0016362.1 mouse_genomes_project 1 135593112 135595662 + Fcmr protein_coding processed_transcript MGP_LPJ_T0021866.1 MGP_LPJ_G0016362.1 mouse_genomes_project 1 135593285 135595673 + Fcmr protein_coding processed_transcript MGP_LPJ_T0002854.1 MGP_LPJ_G0002701.1 mouse_genomes_project 1 74590711 74634985 + 1700027A15Rik antisense antisense MGP_LPJ_T0002855.1 MGP_LPJ_G0002701.1 mouse_genomes_project 1 74625444 74635768 + 1700027A15Rik antisense antisense MGP_LPJ_T0002856.1 MGP_LPJ_G0002701.1 mouse_genomes_project 1 74625789 74635759 + 1700027A15Rik antisense antisense MGP_LPJ_T0002857.1 MGP_LPJ_G0002701.1 mouse_genomes_project 1 74632814 74635760 + 1700027A15Rik antisense antisense MGP_LPJ_T0002858.1 MGP_LPJ_G0002701.1 mouse_genomes_project 1 74634829 74635768 + 1700027A15Rik antisense antisense MGP_LPJ_T0000586.1 MGP_LPJ_G0000521.1 mouse_genomes_project 1 89234856 89237640 + TEC TEC MGP_LPJ_T0000722.1 MGP_LPJ_G0000655.1 mouse_genomes_project 1 159885991 159888538 - TEC TEC MGP_LPJ_T0020304.1 MGP_LPJ_G0016041.1 mouse_genomes_project 1 73057820 73080379 + MGP_LPJ_P0020304 Atic protein_coding protein_coding MGP_LPJ_T0020305.1 MGP_LPJ_G0016041.1 mouse_genomes_project 1 73057849 73063869 + Atic protein_coding retained_intron MGP_LPJ_T0020306.1 MGP_LPJ_G0016041.1 mouse_genomes_project 1 73057849 73060622 + Atic protein_coding retained_intron MGP_LPJ_T0020307.1 MGP_LPJ_G0016041.1 mouse_genomes_project 1 73057849 73074111 + Atic protein_coding retained_intron MGP_LPJ_T0020308.1 MGP_LPJ_G0016041.1 mouse_genomes_project 1 73057883 73063869 + Atic protein_coding retained_intron MGP_LPJ_T0020309.1 MGP_LPJ_G0016041.1 mouse_genomes_project 1 73069613 73073708 + Atic protein_coding retained_intron MGP_LPJ_T0098808.1 MGP_LPJ_G0037071.1 mouse_genomes_project 1 186227099 186227266 + Gm24405 snRNA snRNA MGP_LPJ_T0002984.1 MGP_LPJ_G0002802.1 mouse_genomes_project 1 185883059 185886123 - antisense antisense MGP_LPJ_T0000767.1 MGP_LPJ_G0000700.1 mouse_genomes_project 1 172415471 172416033 - TEC TEC MGP_LPJ_T0005813.1 MGP_LPJ_G0004875.1 mouse_genomes_project 1 75169635 75177050 + Gm29186 lincRNA lincRNA MGP_LPJ_T0101471.1 MGP_LPJ_G0039622.1 mouse_genomes_project 1 100191156 100528704 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0101472.1 MGP_LPJ_G0039622.1 mouse_genomes_project 1 100514156 100627827 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0000716.1 MGP_LPJ_G0000649.1 mouse_genomes_project 1 157281589 157284628 - TEC TEC MGP_LPJ_T0000482.1 MGP_LPJ_G0000417.1 mouse_genomes_project 1 35856312 35859864 - TEC TEC MGP_LPJ_T0019650.1 MGP_LPJ_G0015920.1 mouse_genomes_project 1 52125261 52160238 + MGP_LPJ_P0019650 Stat1 protein_coding protein_coding MGP_LPJ_T0019651.1 MGP_LPJ_G0015920.1 mouse_genomes_project 1 52125276 52166698 + MGP_LPJ_P0019651 Stat1 protein_coding protein_coding MGP_LPJ_T0019652.1 MGP_LPJ_G0015920.1 mouse_genomes_project 1 52125311 52160238 + MGP_LPJ_P0019652 Stat1 protein_coding protein_coding MGP_LPJ_T0019653.1 MGP_LPJ_G0015920.1 mouse_genomes_project 1 52125313 52165840 + MGP_LPJ_P0019653 Stat1 protein_coding protein_coding MGP_LPJ_T0019654.1 MGP_LPJ_G0015920.1 mouse_genomes_project 1 52125319 52137411 + MGP_LPJ_P0019654 Stat1 protein_coding protein_coding MGP_LPJ_T0019655.1 MGP_LPJ_G0015920.1 mouse_genomes_project 1 52125370 52160157 + MGP_LPJ_P0019655 Stat1 protein_coding protein_coding MGP_LPJ_T0019656.1 MGP_LPJ_G0015920.1 mouse_genomes_project 1 52125380 52126222 + Stat1 protein_coding retained_intron MGP_LPJ_T0019657.1 MGP_LPJ_G0015920.1 mouse_genomes_project 1 52125393 52142643 + Stat1 protein_coding retained_intron MGP_LPJ_T0019658.1 MGP_LPJ_G0015920.1 mouse_genomes_project 1 52125445 52165563 + MGP_LPJ_P0019658 Stat1 protein_coding protein_coding MGP_LPJ_T0019659.1 MGP_LPJ_G0015920.1 mouse_genomes_project 1 52154933 52157235 + Stat1 protein_coding retained_intron MGP_LPJ_T0019660.1 MGP_LPJ_G0015920.1 mouse_genomes_project 1 52155089 52166696 + MGP_LPJ_P0019660 Stat1 protein_coding protein_coding MGP_LPJ_T0019661.1 MGP_LPJ_G0015920.1 mouse_genomes_project 1 52157088 52164394 + MGP_LPJ_P0019661 Stat1 protein_coding nonsense_mediated_decay MGP_LPJ_T0020919.1 MGP_LPJ_G0016154.1 mouse_genomes_project 1 88273252 88299960 - MGP_LPJ_P0020919 Gpr55 protein_coding protein_coding MGP_LPJ_T0006057.1 MGP_LPJ_G0005070.1 mouse_genomes_project 1 192951011 192956258 + 4930433J02Rik lincRNA lincRNA MGP_LPJ_T0000495.1 MGP_LPJ_G0000430.1 mouse_genomes_project 1 41940941 41941617 + TEC TEC MGP_LPJ_T0000597.1 MGP_LPJ_G0000532.1 mouse_genomes_project 1 92845330 92846689 - TEC TEC MGP_LPJ_T0021900.1 MGP_LPJ_G0016372.1 mouse_genomes_project 1 136026862 136271131 - MGP_LPJ_P0021900 Srgap2 protein_coding protein_coding MGP_LPJ_T0021901.1 MGP_LPJ_G0016372.1 mouse_genomes_project 1 136030974 136042229 - MGP_LPJ_P0021901 Srgap2 protein_coding protein_coding MGP_LPJ_T0021902.1 MGP_LPJ_G0016372.1 mouse_genomes_project 1 136036598 136069336 - Srgap2 protein_coding processed_transcript MGP_LPJ_T0021903.1 MGP_LPJ_G0016372.1 mouse_genomes_project 1 136036829 136271131 - MGP_LPJ_P0021903 Srgap2 protein_coding protein_coding MGP_LPJ_T0021904.1 MGP_LPJ_G0016372.1 mouse_genomes_project 1 136036830 136045991 - Srgap2 protein_coding processed_transcript MGP_LPJ_T0021905.1 MGP_LPJ_G0016372.1 mouse_genomes_project 1 136036832 136080839 - MGP_LPJ_P0021905 Srgap2 protein_coding protein_coding MGP_LPJ_T0021906.1 MGP_LPJ_G0016372.1 mouse_genomes_project 1 136037367 136037992 - Srgap2 protein_coding processed_transcript MGP_LPJ_T0021907.1 MGP_LPJ_G0016372.1 mouse_genomes_project 1 136038252 136102211 - MGP_LPJ_P0021907 Srgap2 protein_coding protein_coding MGP_LPJ_T0021908.1 MGP_LPJ_G0016372.1 mouse_genomes_project 1 136054266 136068529 - Srgap2 protein_coding retained_intron MGP_LPJ_T0021909.1 MGP_LPJ_G0016372.1 mouse_genomes_project 1 136100172 136271136 - Srgap2 protein_coding retained_intron MGP_LPJ_T0021910.1 MGP_LPJ_G0016372.1 mouse_genomes_project 1 136144544 136257993 - MGP_LPJ_P0021910 Srgap2 protein_coding protein_coding MGP_LPJ_T0021911.1 MGP_LPJ_G0016372.1 mouse_genomes_project 1 136171318 136248298 - MGP_LPJ_P0021911 Srgap2 protein_coding protein_coding MGP_LPJ_T0000494.1 MGP_LPJ_G0000429.1 mouse_genomes_project 1 41765687 41769538 + TEC TEC MGP_LPJ_T0020565.1 MGP_LPJ_G0016092.1 mouse_genomes_project 1 76885643 76886516 - Glb1l protein_coding processed_transcript MGP_LPJ_T0020566.1 MGP_LPJ_G0016092.1 mouse_genomes_project 1 76885650 76899181 - MGP_LPJ_P0020566 Glb1l protein_coding nonsense_mediated_decay MGP_LPJ_T0020567.1 MGP_LPJ_G0016092.1 mouse_genomes_project 1 76886498 76888581 - Glb1l protein_coding retained_intron MGP_LPJ_T0020568.1 MGP_LPJ_G0016092.1 mouse_genomes_project 1 76886754 76899181 - MGP_LPJ_P0020568 Glb1l protein_coding protein_coding MGP_LPJ_T0020569.1 MGP_LPJ_G0016092.1 mouse_genomes_project 1 76886898 76897826 - MGP_LPJ_P0020569 Glb1l protein_coding protein_coding MGP_LPJ_T0020570.1 MGP_LPJ_G0016092.1 mouse_genomes_project 1 76886898 76890299 - MGP_LPJ_P0020570 Glb1l protein_coding nonsense_mediated_decay MGP_LPJ_T0020571.1 MGP_LPJ_G0016092.1 mouse_genomes_project 1 76887236 76897897 - Glb1l protein_coding retained_intron MGP_LPJ_T0020572.1 MGP_LPJ_G0016092.1 mouse_genomes_project 1 76887500 76888657 - Glb1l protein_coding retained_intron MGP_LPJ_T0020573.1 MGP_LPJ_G0016092.1 mouse_genomes_project 1 76888360 76889704 - Glb1l protein_coding retained_intron MGP_LPJ_T0020574.1 MGP_LPJ_G0016092.1 mouse_genomes_project 1 76888614 76889232 - Glb1l protein_coding retained_intron MGP_LPJ_T0020575.1 MGP_LPJ_G0016092.1 mouse_genomes_project 1 76890127 76899216 - MGP_LPJ_P0020575 Glb1l protein_coding protein_coding MGP_LPJ_T0020576.1 MGP_LPJ_G0016092.1 mouse_genomes_project 1 76896412 76899156 - Glb1l protein_coding retained_intron MGP_LPJ_T0020209.1 MGP_LPJ_G0016025.1 mouse_genomes_project 1 66394318 66474423 + MGP_LPJ_P0020209 Pth2r protein_coding protein_coding MGP_LPJ_T0020210.1 MGP_LPJ_G0016025.1 mouse_genomes_project 1 66428072 66516784 + MGP_LPJ_P0020210 Pth2r protein_coding protein_coding MGP_LPJ_T0000656.1 MGP_LPJ_G0000591.1 mouse_genomes_project 1 134538986 134541034 + TEC TEC MGP_LPJ_T0005837.1 MGP_LPJ_G0004894.1 mouse_genomes_project 1 88090630 88100733 + 9930111H07Rik lincRNA lincRNA MGP_LPJ_T0101677.1 MGP_LPJ_G0039715.1 mouse_genomes_project 1 19050492 19062826 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0012149.1 MGP_LPJ_G0010240.1 mouse_genomes_project 1 101341608 101342592 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100022.1 MGP_LPJ_G0038285.1 mouse_genomes_project 1 145300764 145300906 + Gm26048 snoRNA snoRNA MGP_LPJ_T0012025.1 MGP_LPJ_G0010116.1 mouse_genomes_project 1 49396968 49397405 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101721.1 MGP_LPJ_G0039759.1 mouse_genomes_project 1 165456228 165458233 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0101719.1 MGP_LPJ_G0039757.1 mouse_genomes_project 1 145122035 145236149 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002862.1 MGP_LPJ_G0002705.1 mouse_genomes_project 1 76941839 76948128 + Gm28294 antisense antisense MGP_LPJ_T0101685.1 MGP_LPJ_G0039723.1 mouse_genomes_project 1 66542875 66543147 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0021047.1 MGP_LPJ_G0016182.1 mouse_genomes_project 1 89898216 89931454 - MGP_LPJ_P0021047 Ngef protein_coding protein_coding MGP_LPJ_T0021048.1 MGP_LPJ_G0016182.1 mouse_genomes_project 1 89898216 89991099 - MGP_LPJ_P0021048 Ngef protein_coding protein_coding MGP_LPJ_T0021049.1 MGP_LPJ_G0016182.1 mouse_genomes_project 1 89900067 89907551 - MGP_LPJ_P0021049 Ngef protein_coding protein_coding MGP_LPJ_T0021050.1 MGP_LPJ_G0016182.1 mouse_genomes_project 1 89901111 89907591 - Ngef protein_coding retained_intron MGP_LPJ_T0006065.1 MGP_LPJ_G0005077.1 mouse_genomes_project 1 194717745 194724136 + lincRNA lincRNA MGP_LPJ_T0005841.1 MGP_LPJ_G0004898.1 mouse_genomes_project 1 91006427 91026769 - Gm29538 lincRNA lincRNA MGP_LPJ_T0012199.1 MGP_LPJ_G0010290.1 mouse_genomes_project 1 117382712 117383448 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023220.1 MGP_LPJ_G0016638.1 mouse_genomes_project 1 176458391 176464570 - MGP_LPJ_P0023220 Rgs4 protein_coding protein_coding MGP_LPJ_T0023221.1 MGP_LPJ_G0016638.1 mouse_genomes_project 1 176458396 176464573 - MGP_LPJ_P0023221 Rgs4 protein_coding protein_coding MGP_LPJ_T0023222.1 MGP_LPJ_G0016638.1 mouse_genomes_project 1 176460794 176464554 - Rgs4 protein_coding retained_intron MGP_LPJ_T0011976.1 MGP_LPJ_G0010067.1 mouse_genomes_project 1 33774658 33774887 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006079.1 MGP_LPJ_G0005089.1 mouse_genomes_project 1 199726732 199729728 - Gm37432 lincRNA lincRNA MGP_LPJ_T0002882.1 MGP_LPJ_G0002724.1 mouse_genomes_project 1 95722360 95739363 - 9430060I03Rik antisense antisense MGP_LPJ_T0023636.1 MGP_LPJ_G0016755.1 mouse_genomes_project 1 182957452 182988296 - MGP_LPJ_P0023636 Opn3 protein_coding protein_coding MGP_LPJ_T0000423.1 MGP_LPJ_G0000361.1 mouse_genomes_project 1 11858558 11858997 - TEC TEC MGP_LPJ_T0000562.1 MGP_LPJ_G0000497.1 mouse_genomes_project 1 82097651 82099480 - TEC TEC MGP_LPJ_T0006007.1 MGP_LPJ_G0005033.1 mouse_genomes_project 1 173605221 173607768 - Gm16701 lincRNA lincRNA MGP_LPJ_T0024283.1 MGP_LPJ_G0016883.1 mouse_genomes_project 1 203359822 203399901 - MGP_LPJ_P0024283 Cd46 protein_coding protein_coding MGP_LPJ_T0024284.1 MGP_LPJ_G0016883.1 mouse_genomes_project 1 203364831 203379490 - Cd46 protein_coding retained_intron MGP_LPJ_T0024285.1 MGP_LPJ_G0016883.1 mouse_genomes_project 1 203364896 203399877 - MGP_LPJ_P0024285 Cd46 protein_coding nonsense_mediated_decay MGP_LPJ_T0024286.1 MGP_LPJ_G0016883.1 mouse_genomes_project 1 203364919 203391379 - Cd46 protein_coding retained_intron MGP_LPJ_T0018952.1 MGP_LPJ_G0015776.1 mouse_genomes_project 1 14864808 14885741 + MGP_LPJ_P0018952 Gdap1 protein_coding protein_coding MGP_LPJ_T0018953.1 MGP_LPJ_G0015776.1 mouse_genomes_project 1 14864850 14880212 + Gdap1 protein_coding retained_intron MGP_LPJ_T0018954.1 MGP_LPJ_G0015776.1 mouse_genomes_project 1 14864914 14883101 + MGP_LPJ_P0018954 Gdap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0018955.1 MGP_LPJ_G0015776.1 mouse_genomes_project 1 14879837 14883519 + Gdap1 protein_coding retained_intron MGP_LPJ_T0020299.1 MGP_LPJ_G0016040.1 mouse_genomes_project 1 72729162 72909251 - MGP_LPJ_P0020299 Abca12 protein_coding protein_coding MGP_LPJ_T0020300.1 MGP_LPJ_G0016040.1 mouse_genomes_project 1 72777198 72794275 - Abca12 protein_coding retained_intron MGP_LPJ_T0020301.1 MGP_LPJ_G0016040.1 mouse_genomes_project 1 72799992 72909251 - Abca12 protein_coding retained_intron MGP_LPJ_T0020302.1 MGP_LPJ_G0016040.1 mouse_genomes_project 1 72821405 72824482 - Abca12 protein_coding retained_intron MGP_LPJ_T0020303.1 MGP_LPJ_G0016040.1 mouse_genomes_project 1 72852011 72909237 - Abca12 protein_coding retained_intron MGP_LPJ_T0000627.1 MGP_LPJ_G0000562.1 mouse_genomes_project 1 125474185 125474839 - TEC TEC MGP_LPJ_T0019294.1 MGP_LPJ_G0015848.1 mouse_genomes_project 1 35961931 36018097 + MGP_LPJ_P0019294 Vwa3b protein_coding protein_coding MGP_LPJ_T0019295.1 MGP_LPJ_G0015848.1 mouse_genomes_project 1 35964640 36002598 + MGP_LPJ_P0019295 Vwa3b protein_coding non_stop_decay MGP_LPJ_T0019296.1 MGP_LPJ_G0015848.1 mouse_genomes_project 1 35964652 36018096 + MGP_LPJ_P0019296 Vwa3b protein_coding protein_coding MGP_LPJ_T0019297.1 MGP_LPJ_G0015848.1 mouse_genomes_project 1 35964720 36017826 + MGP_LPJ_P0019297 Vwa3b protein_coding protein_coding MGP_LPJ_T0019298.1 MGP_LPJ_G0015848.1 mouse_genomes_project 1 35973673 36139198 + MGP_LPJ_P0019298 Vwa3b protein_coding nonsense_mediated_decay MGP_LPJ_T0019299.1 MGP_LPJ_G0015848.1 mouse_genomes_project 1 35973719 36139358 + MGP_LPJ_P0019299 Vwa3b protein_coding unknown_likely_coding MGP_LPJ_T0019300.1 MGP_LPJ_G0015848.1 mouse_genomes_project 1 36042859 36051402 + Vwa3b protein_coding retained_intron MGP_LPJ_T0019301.1 MGP_LPJ_G0015848.1 mouse_genomes_project 1 36042996 36075611 + Vwa3b protein_coding processed_transcript MGP_LPJ_T0019302.1 MGP_LPJ_G0015848.1 mouse_genomes_project 1 36082073 36087898 + MGP_LPJ_P0019302 Vwa3b protein_coding protein_coding MGP_LPJ_T0019303.1 MGP_LPJ_G0015848.1 mouse_genomes_project 1 36101098 36140194 + MGP_LPJ_P0019303 Vwa3b protein_coding protein_coding MGP_LPJ_T0019304.1 MGP_LPJ_G0015848.1 mouse_genomes_project 1 36139443 36140202 + Vwa3b protein_coding retained_intron MGP_LPJ_T0000617.1 MGP_LPJ_G0000552.1 mouse_genomes_project 1 109472972 109476283 - TEC TEC MGP_LPJ_T0022308.1 MGP_LPJ_G0016459.1 mouse_genomes_project 1 141304543 141381751 - MGP_LPJ_P0022308 Camsap2 protein_coding protein_coding MGP_LPJ_T0022309.1 MGP_LPJ_G0016459.1 mouse_genomes_project 1 141304672 141318160 - MGP_LPJ_P0022309 Camsap2 protein_coding protein_coding MGP_LPJ_T0022310.1 MGP_LPJ_G0016459.1 mouse_genomes_project 1 141305580 141381345 - MGP_LPJ_P0022310 Camsap2 protein_coding protein_coding MGP_LPJ_T0022311.1 MGP_LPJ_G0016459.1 mouse_genomes_project 1 141307026 141381345 - MGP_LPJ_P0022311 Camsap2 protein_coding protein_coding MGP_LPJ_T0022312.1 MGP_LPJ_G0016459.1 mouse_genomes_project 1 141330742 141333635 - Camsap2 protein_coding processed_transcript MGP_LPJ_T0022313.1 MGP_LPJ_G0016459.1 mouse_genomes_project 1 141367679 141381737 - Camsap2 protein_coding processed_transcript MGP_LPJ_T0011911.1 MGP_LPJ_G0010002.1 mouse_genomes_project 1 14493253 14495093 - processed_pseudogene processed_pseudogene MGP_LPJ_T0022385.1 MGP_LPJ_G0016473.1 mouse_genomes_project 1 144670018 144691758 + MGP_LPJ_P0022385 F13b protein_coding protein_coding MGP_LPJ_T0022386.1 MGP_LPJ_G0016473.1 mouse_genomes_project 1 144684399 144685910 + F13b protein_coding processed_transcript MGP_LPJ_T0000799.1 MGP_LPJ_G0000731.1 mouse_genomes_project 1 188060441 188061313 + TEC TEC MGP_LPJ_T0003006.1 MGP_LPJ_G0002821.1 mouse_genomes_project 1 197989843 197994561 + Gm37422 antisense antisense MGP_LPJ_T0024230.1 MGP_LPJ_G0016875.1 mouse_genomes_project 1 201434158 201443943 + MGP_LPJ_P0024230 A130010J15Rik protein_coding protein_coding MGP_LPJ_T0024232.1 MGP_LPJ_G0016875.1 mouse_genomes_project 1 201439580 201442411 + MGP_LPJ_P0024232 A130010J15Rik protein_coding protein_coding MGP_LPJ_T0024233.1 MGP_LPJ_G0016875.1 mouse_genomes_project 1 201439604 201440944 + MGP_LPJ_P0024233 A130010J15Rik protein_coding protein_coding MGP_LPJ_T0024234.1 MGP_LPJ_G0016875.1 mouse_genomes_project 1 201439689 201443943 + MGP_LPJ_P0024234 A130010J15Rik protein_coding protein_coding MGP_LPJ_T0024235.1 MGP_LPJ_G0016875.1 mouse_genomes_project 1 201439692 201442413 + MGP_LPJ_P0024235 A130010J15Rik protein_coding protein_coding MGP_LPJ_T0024236.1 MGP_LPJ_G0016875.1 mouse_genomes_project 1 201439692 201440539 + MGP_LPJ_P0024236 A130010J15Rik protein_coding protein_coding MGP_LPJ_T0024237.1 MGP_LPJ_G0016875.1 mouse_genomes_project 1 201439698 201440665 + MGP_LPJ_P0024237 A130010J15Rik protein_coding protein_coding MGP_LPJ_T0024238.1 MGP_LPJ_G0016875.1 mouse_genomes_project 1 201439856 201440708 + MGP_LPJ_P0024238 A130010J15Rik protein_coding protein_coding MGP_LPJ_T0000724.1 MGP_LPJ_G0000657.1 mouse_genomes_project 1 161973225 161973970 - TEC TEC MGP_LPJ_T0100011.1 MGP_LPJ_G0038274.1 mouse_genomes_project 1 117517453 117517587 - Gm24937 snoRNA snoRNA MGP_LPJ_T0002995.1 MGP_LPJ_G0002811.1 mouse_genomes_project 1 193185622 193187252 + 2010103J01Rik antisense antisense MGP_LPJ_T0005676.1 MGP_LPJ_G0004775.1 mouse_genomes_project 1 10617425 10627220 + Gm29283 lincRNA lincRNA MGP_LPJ_T0000610.1 MGP_LPJ_G0000545.1 mouse_genomes_project 1 100944128 100945812 - TEC TEC MGP_LPJ_T0009565.1 MGP_LPJ_G0007683.1 mouse_genomes_project 1 173976460 173976516 - Gm25911 miRNA miRNA MGP_LPJ_T0099964.1 MGP_LPJ_G0038227.1 mouse_genomes_project 1 18768991 18769122 - Gm24171 snoRNA snoRNA MGP_LPJ_T0012302.1 MGP_LPJ_G0010393.1 mouse_genomes_project 1 165627976 165628482 + processed_pseudogene processed_pseudogene MGP_LPJ_T0020211.1 MGP_LPJ_G0016026.1 mouse_genomes_project 1 67110667 67112454 + MGP_LPJ_P0020211 Crygf protein_coding protein_coding MGP_LPJ_T0020212.1 MGP_LPJ_G0016026.1 mouse_genomes_project 1 67110685 67112453 + MGP_LPJ_P0020212 Crygf protein_coding protein_coding MGP_LPJ_T0023286.1 MGP_LPJ_G0016657.1 mouse_genomes_project 1 177927178 177934077 - Fcgr3 protein_coding retained_intron MGP_LPJ_T0023287.1 MGP_LPJ_G0016657.1 mouse_genomes_project 1 177927179 177935520 - MGP_LPJ_P0023287 Fcgr3 protein_coding protein_coding MGP_LPJ_T0023288.1 MGP_LPJ_G0016657.1 mouse_genomes_project 1 177927220 177935520 - MGP_LPJ_P0023288 Fcgr3 protein_coding protein_coding MGP_LPJ_T0023289.1 MGP_LPJ_G0016657.1 mouse_genomes_project 1 177933850 177945764 - MGP_LPJ_P0023289 Fcgr3 protein_coding protein_coding MGP_LPJ_T0000824.1 MGP_LPJ_G0000755.1 mouse_genomes_project 1 197128765 197130304 + TEC TEC MGP_LPJ_T0000477.1 MGP_LPJ_G0000412.1 mouse_genomes_project 1 32995793 32997085 - TEC TEC MGP_LPJ_T0006014.1 MGP_LPJ_G0005039.1 mouse_genomes_project 1 178225497 178234005 - lincRNA lincRNA MGP_LPJ_T0012260.1 MGP_LPJ_G0010351.1 mouse_genomes_project 1 146612221 146612783 - processed_pseudogene processed_pseudogene MGP_LPJ_T0020744.1 MGP_LPJ_G0016117.1 mouse_genomes_project 1 80530016 80546928 + MGP_LPJ_P0020744 Utp14b protein_coding protein_coding MGP_LPJ_T0020745.1 MGP_LPJ_G0016117.1 mouse_genomes_project 1 80530418 80540613 + MGP_LPJ_P0020745 Utp14b protein_coding protein_coding MGP_LPJ_T0002788.1 MGP_LPJ_G0002651.1 mouse_genomes_project 1 15432994 15479923 - Gm16070 antisense antisense MGP_LPJ_T0002789.1 MGP_LPJ_G0002651.1 mouse_genomes_project 1 15447431 15480285 - Gm16070 antisense antisense MGP_LPJ_T0002790.1 MGP_LPJ_G0002651.1 mouse_genomes_project 1 15477621 15479894 - Gm16070 antisense antisense MGP_LPJ_T0019027.1 MGP_LPJ_G0015800.1 mouse_genomes_project 1 21872716 21937874 - Smap1 protein_coding processed_transcript MGP_LPJ_T0019028.1 MGP_LPJ_G0015800.1 mouse_genomes_project 1 21873489 21951330 - MGP_LPJ_P0019028 Smap1 protein_coding protein_coding MGP_LPJ_T0019029.1 MGP_LPJ_G0015800.1 mouse_genomes_project 1 21873495 21951467 - MGP_LPJ_P0019029 Smap1 protein_coding protein_coding MGP_LPJ_T0019030.1 MGP_LPJ_G0015800.1 mouse_genomes_project 1 21874048 21875648 - Smap1 protein_coding processed_transcript MGP_LPJ_T0019031.1 MGP_LPJ_G0015800.1 mouse_genomes_project 1 21876150 21896921 - Smap1 protein_coding processed_transcript MGP_LPJ_T0019032.1 MGP_LPJ_G0015800.1 mouse_genomes_project 1 21876403 21937841 - Smap1 protein_coding processed_transcript MGP_LPJ_T0019033.1 MGP_LPJ_G0015800.1 mouse_genomes_project 1 21876665 21916356 - Smap1 protein_coding retained_intron MGP_LPJ_T0022150.1 MGP_LPJ_G0016426.1 mouse_genomes_project 1 139352368 139370358 + MGP_LPJ_P0022150 Adipor1 protein_coding protein_coding MGP_LPJ_T0022151.1 MGP_LPJ_G0016426.1 mouse_genomes_project 1 139352446 139370355 + MGP_LPJ_P0022151 Adipor1 protein_coding protein_coding MGP_LPJ_T0022152.1 MGP_LPJ_G0016426.1 mouse_genomes_project 1 139352461 139352931 + Adipor1 protein_coding processed_transcript MGP_LPJ_T0022153.1 MGP_LPJ_G0016426.1 mouse_genomes_project 1 139352554 139363912 + Adipor1 protein_coding retained_intron MGP_LPJ_T0019049.1 MGP_LPJ_G0015804.1 mouse_genomes_project 1 22299969 22501253 - Col19a1 protein_coding processed_transcript MGP_LPJ_T0019050.1 MGP_LPJ_G0015804.1 mouse_genomes_project 1 22303341 22642613 - MGP_LPJ_P0019050 Col19a1 protein_coding protein_coding MGP_LPJ_T0019051.1 MGP_LPJ_G0015804.1 mouse_genomes_project 1 22319151 22642552 - MGP_LPJ_P0019051 Col19a1 protein_coding protein_coding MGP_LPJ_T0098815.1 MGP_LPJ_G0037078.1 mouse_genomes_project 1 200983770 200983886 + Gm22265 snRNA snRNA MGP_LPJ_T0005694.1 MGP_LPJ_G0004792.1 mouse_genomes_project 1 29537033 29606709 - lincRNA lincRNA MGP_LPJ_T0011878.1 MGP_LPJ_G0009969.1 mouse_genomes_project 1 4319543 4319702 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012147.1 MGP_LPJ_G0010238.1 mouse_genomes_project 1 99650494 99651245 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011905.1 MGP_LPJ_G0009996.1 mouse_genomes_project 1 10967865 10968506 - processed_pseudogene processed_pseudogene MGP_LPJ_T0022935.1 MGP_LPJ_G0016574.1 mouse_genomes_project 1 168363119 168400397 - MGP_LPJ_P0022935 4930558K02Rik protein_coding protein_coding MGP_LPJ_T0022936.1 MGP_LPJ_G0016574.1 mouse_genomes_project 1 168363124 168390108 - 4930558K02Rik protein_coding processed_transcript MGP_LPJ_T0012086.1 MGP_LPJ_G0010177.1 mouse_genomes_project 1 67210525 67210863 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009563.1 MGP_LPJ_G0007681.1 mouse_genomes_project 1 172256588 172256731 + Gm44458 miRNA miRNA MGP_LPJ_T0000770.1 MGP_LPJ_G0000703.1 mouse_genomes_project 1 175030811 175032511 - TEC TEC MGP_LPJ_T0012280.1 MGP_LPJ_G0010371.1 mouse_genomes_project 1 155651549 155653616 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000757.1 MGP_LPJ_G0000690.1 mouse_genomes_project 1 168118341 168119464 + TEC TEC MGP_LPJ_T0016920.1 MGP_LPJ_G0015005.1 mouse_genomes_project 1 33195532 33200075 - processed_transcript retained_intron MGP_LPJ_T0016921.1 MGP_LPJ_G0015005.1 mouse_genomes_project 1 33199795 33204045 - processed_transcript antisense MGP_LPJ_T0016922.1 MGP_LPJ_G0015005.1 mouse_genomes_project 1 33202439 33204009 - processed_transcript antisense MGP_LPJ_T0100045.1 MGP_LPJ_G0038308.1 mouse_genomes_project 1 178215447 178215538 + Gm25151 snoRNA snoRNA MGP_LPJ_T0019114.1 MGP_LPJ_G0015817.1 mouse_genomes_project 1 32454284 32468567 - MGP_LPJ_P0019114 Bag2 protein_coding protein_coding MGP_LPJ_T0019115.1 MGP_LPJ_G0015817.1 mouse_genomes_project 1 32455539 32457520 - Bag2 protein_coding retained_intron MGP_LPJ_T0019116.1 MGP_LPJ_G0015817.1 mouse_genomes_project 1 32455602 32468513 - MGP_LPJ_P0019116 Bag2 protein_coding protein_coding MGP_LPJ_T0019117.1 MGP_LPJ_G0015817.1 mouse_genomes_project 1 32467545 32468499 - Bag2 protein_coding retained_intron MGP_LPJ_T0005904.1 MGP_LPJ_G0004951.1 mouse_genomes_project 1 124930986 124936109 + Gm29346 lincRNA lincRNA MGP_LPJ_T0009564.1 MGP_LPJ_G0007682.1 mouse_genomes_project 1 173923918 173924019 + Mir6347 miRNA miRNA MGP_LPJ_T0012085.1 MGP_LPJ_G0010176.1 mouse_genomes_project 1 67209622 67210368 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005763.1 MGP_LPJ_G0004839.1 mouse_genomes_project 1 58067903 58086226 - 4930558J18Rik lincRNA lincRNA MGP_LPJ_T0005883.1 MGP_LPJ_G0004935.1 mouse_genomes_project 1 109553208 109573580 - Gm20753 lincRNA lincRNA MGP_LPJ_T0020724.1 MGP_LPJ_G0016111.1 mouse_genomes_project 1 79946901 80048603 - MGP_LPJ_P0020724 Pax3 protein_coding protein_coding MGP_LPJ_T0020725.1 MGP_LPJ_G0016111.1 mouse_genomes_project 1 79946904 80048899 - MGP_LPJ_P0020725 Pax3 protein_coding protein_coding MGP_LPJ_T0020726.1 MGP_LPJ_G0016111.1 mouse_genomes_project 1 80033846 80048878 - Pax3 protein_coding processed_transcript MGP_LPJ_T0006066.1 MGP_LPJ_G0005078.1 mouse_genomes_project 1 194907853 194911033 + 1700023G09Rik lincRNA lincRNA MGP_LPJ_T0006067.1 MGP_LPJ_G0005078.1 mouse_genomes_project 1 194907882 194910247 + 1700023G09Rik lincRNA lincRNA MGP_LPJ_T0002836.1 MGP_LPJ_G0002689.1 mouse_genomes_project 1 59949249 59951558 + G730003C15Rik antisense antisense MGP_LPJ_T0002837.1 MGP_LPJ_G0002689.1 mouse_genomes_project 1 59949249 59951556 + G730003C15Rik antisense antisense MGP_LPJ_T0022019.1 MGP_LPJ_G0016396.1 mouse_genomes_project 1 137701063 137761951 + MGP_LPJ_P0022019 Lrrn2 protein_coding protein_coding MGP_LPJ_T0022020.1 MGP_LPJ_G0016396.1 mouse_genomes_project 1 137701145 137759096 + Lrrn2 protein_coding processed_transcript MGP_LPJ_T0022100.1 MGP_LPJ_G0016413.1 mouse_genomes_project 1 138797301 138801430 - Optc protein_coding retained_intron MGP_LPJ_T0022101.1 MGP_LPJ_G0016413.1 mouse_genomes_project 1 138797301 138807273 - MGP_LPJ_P0022101 Optc protein_coding protein_coding MGP_LPJ_T0022102.1 MGP_LPJ_G0016413.1 mouse_genomes_project 1 138797302 138808100 - MGP_LPJ_P0022102 Optc protein_coding protein_coding MGP_LPJ_T0022103.1 MGP_LPJ_G0016413.1 mouse_genomes_project 1 138797801 138807227 - MGP_LPJ_P0022103 Optc protein_coding protein_coding MGP_LPJ_T0022104.1 MGP_LPJ_G0016413.1 mouse_genomes_project 1 138800936 138807103 - MGP_LPJ_P0022104 Optc protein_coding protein_coding MGP_LPJ_T0002872.1 MGP_LPJ_G0002714.1 mouse_genomes_project 1 89335703 89461410 - Gm28375 antisense antisense MGP_LPJ_T0020028.1 MGP_LPJ_G0015989.1 mouse_genomes_project 1 61029750 61083458 + MGP_LPJ_P0020028 Carf protein_coding nonsense_mediated_decay MGP_LPJ_T0020029.1 MGP_LPJ_G0015989.1 mouse_genomes_project 1 61029767 61040588 + Carf protein_coding retained_intron MGP_LPJ_T0020030.1 MGP_LPJ_G0015989.1 mouse_genomes_project 1 61029767 61057688 + MGP_LPJ_P0020030 Carf protein_coding protein_coding MGP_LPJ_T0020031.1 MGP_LPJ_G0015989.1 mouse_genomes_project 1 61032773 61036007 + Carf protein_coding retained_intron MGP_LPJ_T0020032.1 MGP_LPJ_G0015989.1 mouse_genomes_project 1 61034211 61083113 + MGP_LPJ_P0020032 Carf protein_coding protein_coding MGP_LPJ_T0020033.1 MGP_LPJ_G0015989.1 mouse_genomes_project 1 61039628 61083226 + MGP_LPJ_P0020033 Carf protein_coding nonsense_mediated_decay MGP_LPJ_T0020034.1 MGP_LPJ_G0015989.1 mouse_genomes_project 1 61071072 61073488 + Carf protein_coding retained_intron MGP_LPJ_T0020035.1 MGP_LPJ_G0015989.1 mouse_genomes_project 1 61072724 61080453 + MGP_LPJ_P0020035 Carf protein_coding nonsense_mediated_decay MGP_LPJ_T0012348.1 MGP_LPJ_G0010439.1 mouse_genomes_project 1 188833927 188835064 + processed_pseudogene processed_pseudogene MGP_LPJ_T0023872.1 MGP_LPJ_G0016803.1 mouse_genomes_project 1 189520191 189535860 + protein_coding retained_intron MGP_LPJ_T0023873.1 MGP_LPJ_G0016803.1 mouse_genomes_project 1 189522239 189551225 + MGP_LPJ_P0023873 protein_coding protein_coding MGP_LPJ_T0023874.1 MGP_LPJ_G0016803.1 mouse_genomes_project 1 189523943 189527818 + protein_coding processed_transcript MGP_LPJ_T0012018.1 MGP_LPJ_G0010109.1 mouse_genomes_project 1 48505997 48508873 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011912.1 MGP_LPJ_G0010003.1 mouse_genomes_project 1 14979123 14979502 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000646.1 MGP_LPJ_G0000581.1 mouse_genomes_project 1 131959319 131959862 + TEC TEC MGP_LPJ_T0098696.1 MGP_LPJ_G0036963.1 mouse_genomes_project 1 108754894 108779650 - sense_overlapping sense_overlapping MGP_LPJ_T0020931.1 MGP_LPJ_G0016157.1 mouse_genomes_project 1 88406933 88414601 + protein_coding retained_intron MGP_LPJ_T0020932.1 MGP_LPJ_G0016157.1 mouse_genomes_project 1 88406933 88415485 + protein_coding processed_transcript MGP_LPJ_T0020933.1 MGP_LPJ_G0016157.1 mouse_genomes_project 1 88407166 88477122 + MGP_LPJ_P0020933 protein_coding nonsense_mediated_decay MGP_LPJ_T0020934.1 MGP_LPJ_G0016157.1 mouse_genomes_project 1 88407166 88484542 + MGP_LPJ_P0020934 protein_coding protein_coding MGP_LPJ_T0020935.1 MGP_LPJ_G0016157.1 mouse_genomes_project 1 88407188 88410210 + protein_coding retained_intron MGP_LPJ_T0020936.1 MGP_LPJ_G0016157.1 mouse_genomes_project 1 88407239 88416109 + protein_coding retained_intron MGP_LPJ_T0020937.1 MGP_LPJ_G0016157.1 mouse_genomes_project 1 88407418 88419344 + protein_coding processed_transcript MGP_LPJ_T0020940.1 MGP_LPJ_G0016157.1 mouse_genomes_project 1 88454355 88477173 + protein_coding processed_transcript MGP_LPJ_T0020941.1 MGP_LPJ_G0016157.1 mouse_genomes_project 1 88472305 88477140 + protein_coding retained_intron MGP_LPJ_T0024203.1 MGP_LPJ_G0016870.1 mouse_genomes_project 1 200734324 201011562 - MGP_LPJ_P0024203 Hhat protein_coding protein_coding MGP_LPJ_T0024204.1 MGP_LPJ_G0016870.1 mouse_genomes_project 1 200750445 201011572 - MGP_LPJ_P0024204 Hhat protein_coding protein_coding MGP_LPJ_T0024205.1 MGP_LPJ_G0016870.1 mouse_genomes_project 1 200780713 201011567 - MGP_LPJ_P0024205 Hhat protein_coding non_stop_decay MGP_LPJ_T0024206.1 MGP_LPJ_G0016870.1 mouse_genomes_project 1 200861864 200964600 - Hhat protein_coding processed_transcript MGP_LPJ_T0024207.1 MGP_LPJ_G0016870.1 mouse_genomes_project 1 200888815 200923776 - Hhat protein_coding processed_transcript MGP_LPJ_T0024208.1 MGP_LPJ_G0016870.1 mouse_genomes_project 1 200964588 200975488 - Hhat protein_coding processed_transcript MGP_LPJ_T0024209.1 MGP_LPJ_G0016870.1 mouse_genomes_project 1 200974618 201011341 - Hhat protein_coding processed_transcript MGP_LPJ_T0022199.1 MGP_LPJ_G0016438.1 mouse_genomes_project 1 140245545 140250539 - MGP_LPJ_P0022199 Elf3 protein_coding protein_coding MGP_LPJ_T0022200.1 MGP_LPJ_G0016438.1 mouse_genomes_project 1 140245549 140250409 - MGP_LPJ_P0022200 Elf3 protein_coding protein_coding MGP_LPJ_T0022201.1 MGP_LPJ_G0016438.1 mouse_genomes_project 1 140248627 140249620 - Elf3 protein_coding retained_intron MGP_LPJ_T0005880.1 MGP_LPJ_G0004933.1 mouse_genomes_project 1 108460272 108471170 + Gm29012 lincRNA lincRNA MGP_LPJ_T0101737.1 MGP_LPJ_G0039775.1 mouse_genomes_project 1 184196517 184196677 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0101216.1 MGP_LPJ_G0039479.1 mouse_genomes_project 1 33147406 33148237 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0101217.1 MGP_LPJ_G0039479.1 mouse_genomes_project 1 33148121 33149928 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0012203.1 MGP_LPJ_G0010294.1 mouse_genomes_project 1 121566572 121567046 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021918.1 MGP_LPJ_G0016376.1 mouse_genomes_project 1 136427030 136457634 + MGP_LPJ_P0021918 Rab7b protein_coding protein_coding MGP_LPJ_T0021919.1 MGP_LPJ_G0016376.1 mouse_genomes_project 1 136427042 136454953 + MGP_LPJ_P0021919 Rab7b protein_coding protein_coding MGP_LPJ_T0021920.1 MGP_LPJ_G0016376.1 mouse_genomes_project 1 136427073 136453865 + MGP_LPJ_P0021920 Rab7b protein_coding protein_coding MGP_LPJ_T0021921.1 MGP_LPJ_G0016376.1 mouse_genomes_project 1 136427101 136454032 + MGP_LPJ_P0021921 Rab7b protein_coding protein_coding MGP_LPJ_T0021922.1 MGP_LPJ_G0016376.1 mouse_genomes_project 1 136434961 136448189 + Rab7b protein_coding processed_transcript MGP_LPJ_T0101717.1 MGP_LPJ_G0039755.1 mouse_genomes_project 1 139463273 139467453 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0021138.1 MGP_LPJ_G0016204.1 mouse_genomes_project 1 91250253 91281380 - MGP_LPJ_P0021138 Arl4c protein_coding nonsense_mediated_decay MGP_LPJ_T0021139.1 MGP_LPJ_G0016204.1 mouse_genomes_project 1 91250255 91281380 - MGP_LPJ_P0021139 Arl4c protein_coding protein_coding MGP_LPJ_T0021140.1 MGP_LPJ_G0016204.1 mouse_genomes_project 1 91277714 91281725 - MGP_LPJ_P0021140 Arl4c protein_coding protein_coding MGP_LPJ_T0023249.1 MGP_LPJ_G0016645.1 mouse_genomes_project 1 177088948 177102568 + MGP_LPJ_P0023249 Sh2d1b1 protein_coding protein_coding MGP_LPJ_T0000545.1 MGP_LPJ_G0000480.1 mouse_genomes_project 1 70083404 70085777 - TEC TEC MGP_LPJ_T0005787.1 MGP_LPJ_G0004857.1 mouse_genomes_project 1 65253910 65363415 - Gm28981 lincRNA lincRNA MGP_LPJ_T0006042.1 MGP_LPJ_G0005061.1 mouse_genomes_project 1 191541960 191605987 + Gm34068 lincRNA lincRNA MGP_LPJ_T0019621.1 MGP_LPJ_G0015915.1 mouse_genomes_project 1 50834263 50847474 + Tmeff2 protein_coding processed_transcript MGP_LPJ_T0019622.1 MGP_LPJ_G0015915.1 mouse_genomes_project 1 50834263 50850349 + Tmeff2 protein_coding processed_transcript MGP_LPJ_T0019623.1 MGP_LPJ_G0015915.1 mouse_genomes_project 1 50843510 50919014 + MGP_LPJ_P0019623 Tmeff2 protein_coding protein_coding MGP_LPJ_T0019624.1 MGP_LPJ_G0015915.1 mouse_genomes_project 1 50863727 51142442 + MGP_LPJ_P0019624 Tmeff2 protein_coding protein_coding MGP_LPJ_T0003013.1 MGP_LPJ_G0002827.1 mouse_genomes_project 1 200153141 200167982 - 1700034H15Rik antisense antisense MGP_LPJ_T0003014.1 MGP_LPJ_G0002827.1 mouse_genomes_project 1 200157239 200166221 - 1700034H15Rik antisense antisense MGP_LPJ_T0003015.1 MGP_LPJ_G0002827.1 mouse_genomes_project 1 200157241 200166348 - 1700034H15Rik antisense antisense MGP_LPJ_T0003016.1 MGP_LPJ_G0002827.1 mouse_genomes_project 1 200157430 200168815 - 1700034H15Rik antisense antisense MGP_LPJ_T0003017.1 MGP_LPJ_G0002827.1 mouse_genomes_project 1 200161118 200174476 - 1700034H15Rik antisense antisense MGP_LPJ_T0003018.1 MGP_LPJ_G0002827.1 mouse_genomes_project 1 200167065 200174484 - 1700034H15Rik antisense antisense MGP_LPJ_T0011949.1 MGP_LPJ_G0010040.1 mouse_genomes_project 1 29283210 29283538 - processed_pseudogene processed_pseudogene MGP_LPJ_T0022487.1 MGP_LPJ_G0016495.1 mouse_genomes_project 1 156131083 156146757 - MGP_LPJ_P0022487 Prg4 protein_coding protein_coding MGP_LPJ_T0022488.1 MGP_LPJ_G0016495.1 mouse_genomes_project 1 156131083 156146757 - MGP_LPJ_P0022488 Prg4 protein_coding protein_coding MGP_LPJ_T0022489.1 MGP_LPJ_G0016495.1 mouse_genomes_project 1 156131083 156146757 - MGP_LPJ_P0022489 Prg4 protein_coding protein_coding MGP_LPJ_T0022490.1 MGP_LPJ_G0016495.1 mouse_genomes_project 1 156131083 156146757 - MGP_LPJ_P0022490 Prg4 protein_coding protein_coding MGP_LPJ_T0022491.1 MGP_LPJ_G0016495.1 mouse_genomes_project 1 156131487 156147322 - MGP_LPJ_P0022491 Prg4 protein_coding protein_coding MGP_LPJ_T0022492.1 MGP_LPJ_G0016495.1 mouse_genomes_project 1 156131540 156147322 - MGP_LPJ_P0022492 Prg4 protein_coding protein_coding MGP_LPJ_T0022493.1 MGP_LPJ_G0016495.1 mouse_genomes_project 1 156137079 156147322 - MGP_LPJ_P0022493 Prg4 protein_coding protein_coding MGP_LPJ_T0022494.1 MGP_LPJ_G0016495.1 mouse_genomes_project 1 156139275 156147322 - MGP_LPJ_P0022494 Prg4 protein_coding protein_coding MGP_LPJ_T0023477.1 MGP_LPJ_G0016695.1 mouse_genomes_project 1 179092884 179144319 + MGP_LPJ_P0023477 Dcaf8 protein_coding nonsense_mediated_decay MGP_LPJ_T0023478.1 MGP_LPJ_G0016695.1 mouse_genomes_project 1 179092889 179136752 + Dcaf8 protein_coding retained_intron MGP_LPJ_T0023479.1 MGP_LPJ_G0016695.1 mouse_genomes_project 1 179092918 179145031 + MGP_LPJ_P0023479 Dcaf8 protein_coding protein_coding MGP_LPJ_T0023480.1 MGP_LPJ_G0016695.1 mouse_genomes_project 1 179092940 179137979 + Dcaf8 protein_coding retained_intron MGP_LPJ_T0023481.1 MGP_LPJ_G0016695.1 mouse_genomes_project 1 179092942 179144990 + MGP_LPJ_P0023481 Dcaf8 protein_coding protein_coding MGP_LPJ_T0023482.1 MGP_LPJ_G0016695.1 mouse_genomes_project 1 179092978 179145913 + MGP_LPJ_P0023482 Dcaf8 protein_coding protein_coding MGP_LPJ_T0023483.1 MGP_LPJ_G0016695.1 mouse_genomes_project 1 179093745 179137979 + Dcaf8 protein_coding retained_intron MGP_LPJ_T0023484.1 MGP_LPJ_G0016695.1 mouse_genomes_project 1 179121337 179123639 + Dcaf8 protein_coding retained_intron MGP_LPJ_T0023485.1 MGP_LPJ_G0016695.1 mouse_genomes_project 1 179121441 179140753 + MGP_LPJ_P0023485 Dcaf8 protein_coding nonsense_mediated_decay MGP_LPJ_T0023486.1 MGP_LPJ_G0016695.1 mouse_genomes_project 1 179125720 179130236 + Dcaf8 protein_coding retained_intron MGP_LPJ_T0023487.1 MGP_LPJ_G0016695.1 mouse_genomes_project 1 179135551 179146530 + MGP_LPJ_P0023487 Dcaf8 protein_coding protein_coding MGP_LPJ_T0100036.1 MGP_LPJ_G0038299.1 mouse_genomes_project 1 167378263 167378347 + Mir5117 snoRNA snoRNA MGP_LPJ_T0000819.1 MGP_LPJ_G0000750.1 mouse_genomes_project 1 195055478 195057764 - TEC TEC MGP_LPJ_T0020015.1 MGP_LPJ_G0015987.1 mouse_genomes_project 1 60894216 60902653 - Ica1l protein_coding processed_transcript MGP_LPJ_T0020016.1 MGP_LPJ_G0015987.1 mouse_genomes_project 1 60900793 60957706 - MGP_LPJ_P0020016 Ica1l protein_coding unknown_likely_coding MGP_LPJ_T0020017.1 MGP_LPJ_G0015987.1 mouse_genomes_project 1 60902849 60941552 - MGP_LPJ_P0020017 Ica1l protein_coding protein_coding MGP_LPJ_T0020018.1 MGP_LPJ_G0015987.1 mouse_genomes_project 1 60928092 60936128 - Ica1l protein_coding retained_intron MGP_LPJ_T0020019.1 MGP_LPJ_G0015987.1 mouse_genomes_project 1 60933628 60957748 - Ica1l protein_coding processed_transcript MGP_LPJ_T0023385.1 MGP_LPJ_G0016673.1 mouse_genomes_project 1 178246018 178253437 - Nit1 protein_coding retained_intron MGP_LPJ_T0023386.1 MGP_LPJ_G0016673.1 mouse_genomes_project 1 178246018 178253584 - MGP_LPJ_P0023386 Nit1 protein_coding protein_coding MGP_LPJ_T0023387.1 MGP_LPJ_G0016673.1 mouse_genomes_project 1 178248577 178253602 - MGP_LPJ_P0023387 Nit1 protein_coding protein_coding MGP_LPJ_T0023388.1 MGP_LPJ_G0016673.1 mouse_genomes_project 1 178249327 178253596 - Nit1 protein_coding retained_intron MGP_LPJ_T0023389.1 MGP_LPJ_G0016673.1 mouse_genomes_project 1 178250238 178253601 - MGP_LPJ_P0023389 Nit1 protein_coding protein_coding MGP_LPJ_T0023390.1 MGP_LPJ_G0016673.1 mouse_genomes_project 1 178251771 178253581 - MGP_LPJ_P0023390 Nit1 protein_coding protein_coding MGP_LPJ_T0023391.1 MGP_LPJ_G0016673.1 mouse_genomes_project 1 178251826 178252420 - Nit1 protein_coding retained_intron MGP_LPJ_T0023392.1 MGP_LPJ_G0016673.1 mouse_genomes_project 1 178252149 178253601 - MGP_LPJ_P0023392 Nit1 protein_coding protein_coding MGP_LPJ_T0000405.1 MGP_LPJ_G0000343.1 mouse_genomes_project 1 7446543 7447913 + TEC TEC MGP_LPJ_T0019084.1 MGP_LPJ_G0015810.1 mouse_genomes_project 1 29447781 29452616 - protein_coding retained_intron MGP_LPJ_T0019085.1 MGP_LPJ_G0015810.1 mouse_genomes_project 1 29447821 29452332 - MGP_LPJ_P0019085 protein_coding unknown_likely_coding MGP_LPJ_T0019086.1 MGP_LPJ_G0015810.1 mouse_genomes_project 1 29449410 29450494 - protein_coding retained_intron MGP_LPJ_T0019087.1 MGP_LPJ_G0015810.1 mouse_genomes_project 1 29452356 29455715 - protein_coding processed_transcript MGP_LPJ_T0019088.1 MGP_LPJ_G0015810.1 mouse_genomes_project 1 29452733 29455993 - MGP_LPJ_P0019088 protein_coding protein_coding MGP_LPJ_T0005756.1 MGP_LPJ_G0004834.1 mouse_genomes_project 1 56524167 56569464 + 9130227L01Rik lincRNA lincRNA MGP_LPJ_T0005757.1 MGP_LPJ_G0004834.1 mouse_genomes_project 1 56558305 56569694 + 9130227L01Rik lincRNA lincRNA MGP_LPJ_T0000389.1 MGP_LPJ_G0000327.1 mouse_genomes_project 1 774496 778024 - TEC TEC MGP_LPJ_T0023455.1 MGP_LPJ_G0016692.1 mouse_genomes_project 1 178999161 179019094 - MGP_LPJ_P0023455 Ncstn protein_coding nonsense_mediated_decay MGP_LPJ_T0023456.1 MGP_LPJ_G0016692.1 mouse_genomes_project 1 178999161 179019094 - MGP_LPJ_P0023456 Ncstn protein_coding protein_coding MGP_LPJ_T0023457.1 MGP_LPJ_G0016692.1 mouse_genomes_project 1 178999161 179019094 - MGP_LPJ_P0023457 Ncstn protein_coding nonsense_mediated_decay MGP_LPJ_T0023458.1 MGP_LPJ_G0016692.1 mouse_genomes_project 1 178999849 179001214 - Ncstn protein_coding retained_intron MGP_LPJ_T0023459.1 MGP_LPJ_G0016692.1 mouse_genomes_project 1 179001019 179004415 - Ncstn protein_coding retained_intron MGP_LPJ_T0023460.1 MGP_LPJ_G0016692.1 mouse_genomes_project 1 179015167 179019094 - Ncstn protein_coding retained_intron MGP_LPJ_T0017025.1 MGP_LPJ_G0015039.1 mouse_genomes_project 1 178583562 178588812 - A630035G10Rik processed_transcript lincRNA MGP_LPJ_T0017026.1 MGP_LPJ_G0015039.1 mouse_genomes_project 1 178586998 178588855 - A630035G10Rik processed_transcript retained_intron MGP_LPJ_T0000496.1 MGP_LPJ_G0000431.1 mouse_genomes_project 1 42818380 42820871 + TEC TEC MGP_LPJ_T0019616.1 MGP_LPJ_G0015913.1 mouse_genomes_project 1 46539847 46611675 - MGP_LPJ_P0019616 Slc39a10 protein_coding protein_coding MGP_LPJ_T0019617.1 MGP_LPJ_G0015913.1 mouse_genomes_project 1 46575615 46593756 - Slc39a10 protein_coding retained_intron MGP_LPJ_T0019618.1 MGP_LPJ_G0015913.1 mouse_genomes_project 1 46593496 46651898 - MGP_LPJ_P0019618 Slc39a10 protein_coding protein_coding MGP_LPJ_T0019619.1 MGP_LPJ_G0015913.1 mouse_genomes_project 1 46593594 46647137 - MGP_LPJ_P0019619 Slc39a10 protein_coding protein_coding MGP_LPJ_T0022164.1 MGP_LPJ_G0016430.1 mouse_genomes_project 1 139511130 139587678 + MGP_LPJ_P0022164 Kdm5b protein_coding protein_coding MGP_LPJ_T0022165.1 MGP_LPJ_G0016430.1 mouse_genomes_project 1 139511151 139583916 + MGP_LPJ_P0022165 Kdm5b protein_coding protein_coding MGP_LPJ_T0022166.1 MGP_LPJ_G0016430.1 mouse_genomes_project 1 139511166 139559185 + Kdm5b protein_coding retained_intron MGP_LPJ_T0022167.1 MGP_LPJ_G0016430.1 mouse_genomes_project 1 139511298 139583204 + MGP_LPJ_P0022167 Kdm5b protein_coding unknown_likely_coding MGP_LPJ_T0022168.1 MGP_LPJ_G0016430.1 mouse_genomes_project 1 139540329 139543039 + Kdm5b protein_coding retained_intron MGP_LPJ_T0022169.1 MGP_LPJ_G0016430.1 mouse_genomes_project 1 139574273 139577495 + Kdm5b protein_coding retained_intron MGP_LPJ_T0022170.1 MGP_LPJ_G0016430.1 mouse_genomes_project 1 139575193 139579595 + Kdm5b protein_coding retained_intron MGP_LPJ_T0012046.1 MGP_LPJ_G0010137.1 mouse_genomes_project 1 55945499 55946392 - processed_pseudogene processed_pseudogene MGP_LPJ_T0024256.1 MGP_LPJ_G0016878.1 mouse_genomes_project 1 201488519 201511775 - MGP_LPJ_P0024256 Hsd11b1 protein_coding protein_coding MGP_LPJ_T0024257.1 MGP_LPJ_G0016878.1 mouse_genomes_project 1 201488567 201510741 - MGP_LPJ_P0024257 Hsd11b1 protein_coding protein_coding MGP_LPJ_T0024258.1 MGP_LPJ_G0016878.1 mouse_genomes_project 1 201488574 201534014 - MGP_LPJ_P0024258 Hsd11b1 protein_coding protein_coding MGP_LPJ_T0024259.1 MGP_LPJ_G0016878.1 mouse_genomes_project 1 201490526 201512707 - MGP_LPJ_P0024259 Hsd11b1 protein_coding protein_coding MGP_LPJ_T0024260.1 MGP_LPJ_G0016878.1 mouse_genomes_project 1 201497250 201509553 - MGP_LPJ_P0024260 Hsd11b1 protein_coding protein_coding MGP_LPJ_T0024261.1 MGP_LPJ_G0016878.1 mouse_genomes_project 1 201506188 201508166 - Hsd11b1 protein_coding retained_intron MGP_LPJ_T0024262.1 MGP_LPJ_G0016878.1 mouse_genomes_project 1 201507416 201510567 - Hsd11b1 protein_coding processed_transcript MGP_LPJ_T0002964.1 MGP_LPJ_G0002785.1 mouse_genomes_project 1 172422034 172422924 - Gm37469 antisense antisense MGP_LPJ_T0012249.1 MGP_LPJ_G0010340.1 mouse_genomes_project 1 141874532 141875076 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018894.1 MGP_LPJ_G0015765.1 mouse_genomes_project 1 13479554 13523342 + MGP_LPJ_P0018894 Terf1 protein_coding protein_coding MGP_LPJ_T0018895.1 MGP_LPJ_G0015765.1 mouse_genomes_project 1 13479565 13496785 + Terf1 protein_coding processed_transcript MGP_LPJ_T0018896.1 MGP_LPJ_G0015765.1 mouse_genomes_project 1 13479572 13522755 + MGP_LPJ_P0018896 Terf1 protein_coding protein_coding MGP_LPJ_T0018897.1 MGP_LPJ_G0015765.1 mouse_genomes_project 1 13481544 13496874 + Terf1 protein_coding retained_intron MGP_LPJ_T0005989.1 MGP_LPJ_G0005018.1 mouse_genomes_project 1 170645889 170649540 - Gm16548 lincRNA lincRNA MGP_LPJ_T0011906.1 MGP_LPJ_G0009997.1 mouse_genomes_project 1 13433223 13433729 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005670.1 MGP_LPJ_G0004773.1 mouse_genomes_project 1 7421194 7423354 - Snhg6 lincRNA lincRNA MGP_LPJ_T0005671.1 MGP_LPJ_G0004773.1 mouse_genomes_project 1 7421258 7422466 - Snhg6 lincRNA lincRNA MGP_LPJ_T0005672.1 MGP_LPJ_G0004773.1 mouse_genomes_project 1 7421260 7422140 - Snhg6 lincRNA lincRNA MGP_LPJ_T0005673.1 MGP_LPJ_G0004773.1 mouse_genomes_project 1 7421260 7423353 - Snhg6 lincRNA lincRNA MGP_LPJ_T0005674.1 MGP_LPJ_G0004773.1 mouse_genomes_project 1 7421260 7423339 - Snhg6 lincRNA lincRNA MGP_LPJ_T0012112.1 MGP_LPJ_G0010203.1 mouse_genomes_project 1 82046134 82046398 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011881.1 MGP_LPJ_G0009972.1 mouse_genomes_project 1 4510972 4511150 - processed_pseudogene processed_pseudogene MGP_LPJ_T0020577.1 MGP_LPJ_G0016093.1 mouse_genomes_project 1 76899240 76904009 + MGP_LPJ_P0020577 Stk16 protein_coding protein_coding MGP_LPJ_T0020578.1 MGP_LPJ_G0016093.1 mouse_genomes_project 1 76899248 76900274 + Stk16 protein_coding retained_intron MGP_LPJ_T0020579.1 MGP_LPJ_G0016093.1 mouse_genomes_project 1 76899250 76900638 + MGP_LPJ_P0020579 Stk16 protein_coding protein_coding MGP_LPJ_T0020580.1 MGP_LPJ_G0016093.1 mouse_genomes_project 1 76899272 76902645 + MGP_LPJ_P0020580 Stk16 protein_coding nonsense_mediated_decay MGP_LPJ_T0020581.1 MGP_LPJ_G0016093.1 mouse_genomes_project 1 76899276 76900637 + MGP_LPJ_P0020581 Stk16 protein_coding protein_coding MGP_LPJ_T0020582.1 MGP_LPJ_G0016093.1 mouse_genomes_project 1 76899278 76902642 + Stk16 protein_coding retained_intron MGP_LPJ_T0020583.1 MGP_LPJ_G0016093.1 mouse_genomes_project 1 76899282 76901540 + Stk16 protein_coding processed_transcript MGP_LPJ_T0020584.1 MGP_LPJ_G0016093.1 mouse_genomes_project 1 76899456 76901631 + MGP_LPJ_P0020584 Stk16 protein_coding protein_coding MGP_LPJ_T0020585.1 MGP_LPJ_G0016093.1 mouse_genomes_project 1 76899642 76902354 + MGP_LPJ_P0020585 Stk16 protein_coding protein_coding MGP_LPJ_T0020586.1 MGP_LPJ_G0016093.1 mouse_genomes_project 1 76900364 76901590 + Stk16 protein_coding retained_intron MGP_LPJ_T0020587.1 MGP_LPJ_G0016093.1 mouse_genomes_project 1 76900405 76901496 + Stk16 protein_coding retained_intron MGP_LPJ_T0020588.1 MGP_LPJ_G0016093.1 mouse_genomes_project 1 76900407 76900808 + Stk16 protein_coding retained_intron MGP_LPJ_T0020589.1 MGP_LPJ_G0016093.1 mouse_genomes_project 1 76900801 76901558 + Stk16 protein_coding retained_intron MGP_LPJ_T0020590.1 MGP_LPJ_G0016093.1 mouse_genomes_project 1 76901026 76902419 + Stk16 protein_coding processed_transcript MGP_LPJ_T0020591.1 MGP_LPJ_G0016093.1 mouse_genomes_project 1 76901034 76902316 + Stk16 protein_coding retained_intron MGP_LPJ_T0020592.1 MGP_LPJ_G0016093.1 mouse_genomes_project 1 76901463 76902434 + Stk16 protein_coding retained_intron MGP_LPJ_T0021839.1 MGP_LPJ_G0016355.1 mouse_genomes_project 1 135337182 135365112 - MGP_LPJ_P0021839 C4bp protein_coding protein_coding MGP_LPJ_T0021840.1 MGP_LPJ_G0016355.1 mouse_genomes_project 1 135339223 135350776 - MGP_LPJ_P0021840 C4bp protein_coding protein_coding MGP_LPJ_T0021841.1 MGP_LPJ_G0016355.1 mouse_genomes_project 1 135345429 135365090 - MGP_LPJ_P0021841 C4bp protein_coding protein_coding MGP_LPJ_T0021842.1 MGP_LPJ_G0016355.1 mouse_genomes_project 1 135361255 135365104 - C4bp protein_coding retained_intron MGP_LPJ_T0012108.1 MGP_LPJ_G0010199.1 mouse_genomes_project 1 79378072 79378364 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011944.1 MGP_LPJ_G0010035.1 mouse_genomes_project 1 26137944 26138598 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002908.1 MGP_LPJ_G0002741.1 mouse_genomes_project 1 136005483 136008864 + Gm28913 antisense antisense MGP_LPJ_T0009520.1 MGP_LPJ_G0007638.1 mouse_genomes_project 1 76898015 76898131 - Gm27943 miRNA miRNA MGP_LPJ_T0009552.1 MGP_LPJ_G0007670.1 mouse_genomes_project 1 143076979 143077059 + Mir181b-1 miRNA miRNA MGP_LPJ_T0099975.1 MGP_LPJ_G0038238.1 mouse_genomes_project 1 43261727 43261852 + Gm26352 snoRNA snoRNA MGP_LPJ_T0006019.1 MGP_LPJ_G0005044.1 mouse_genomes_project 1 184834585 184843469 + Gm37306 lincRNA lincRNA MGP_LPJ_T0011255.1 MGP_LPJ_G0009373.1 mouse_genomes_project 1 13556255 13556558 + Gm23259 misc_RNA misc_RNA MGP_LPJ_T0012207.1 MGP_LPJ_G0010298.1 mouse_genomes_project 1 122872535 122872854 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011965.1 MGP_LPJ_G0010056.1 mouse_genomes_project 1 32679559 32679893 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000808.1 MGP_LPJ_G0000740.1 mouse_genomes_project 1 190230093 190230851 - TEC TEC MGP_LPJ_T0000809.1 MGP_LPJ_G0000740.1 mouse_genomes_project 1 190230448 190230850 - TEC TEC MGP_LPJ_T0002978.1 MGP_LPJ_G0002797.1 mouse_genomes_project 1 179273052 179273720 + Gm36937 antisense antisense MGP_LPJ_T0011910.1 MGP_LPJ_G0010001.1 mouse_genomes_project 1 14483868 14484287 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002786.1 MGP_LPJ_G0002649.1 mouse_genomes_project 1 14619546 14812689 + antisense antisense MGP_LPJ_T0018998.1 MGP_LPJ_G0015792.1 mouse_genomes_project 1 19132447 19159680 + MGP_LPJ_P0018998 Gsta3 protein_coding protein_coding MGP_LPJ_T0018999.1 MGP_LPJ_G0015792.1 mouse_genomes_project 1 19132465 19159040 + MGP_LPJ_P0018999 Gsta3 protein_coding protein_coding MGP_LPJ_T0019000.1 MGP_LPJ_G0015792.1 mouse_genomes_project 1 19132487 19158865 + MGP_LPJ_P0019000 Gsta3 protein_coding protein_coding MGP_LPJ_T0019001.1 MGP_LPJ_G0015792.1 mouse_genomes_project 1 19147539 19150331 + Gsta3 protein_coding retained_intron MGP_LPJ_T0023682.1 MGP_LPJ_G0016763.1 mouse_genomes_project 1 184368123 184603181 - MGP_LPJ_P0023682 Akt3 protein_coding protein_coding MGP_LPJ_T0023683.1 MGP_LPJ_G0016763.1 mouse_genomes_project 1 184370165 184603152 - MGP_LPJ_P0023683 Akt3 protein_coding protein_coding MGP_LPJ_T0023684.1 MGP_LPJ_G0016763.1 mouse_genomes_project 1 184370166 184603245 - MGP_LPJ_P0023684 Akt3 protein_coding protein_coding MGP_LPJ_T0022839.1 MGP_LPJ_G0016557.1 mouse_genomes_project 1 166328277 166331735 + 4930523C07Rik protein_coding retained_intron MGP_LPJ_T0022840.1 MGP_LPJ_G0016557.1 mouse_genomes_project 1 166328279 166356472 + 4930523C07Rik protein_coding lincRNA MGP_LPJ_T0022841.1 MGP_LPJ_G0016557.1 mouse_genomes_project 1 166328279 166365159 + 4930523C07Rik protein_coding lincRNA MGP_LPJ_T0022842.1 MGP_LPJ_G0016557.1 mouse_genomes_project 1 166328300 166357731 + 4930523C07Rik protein_coding lincRNA MGP_LPJ_T0022843.1 MGP_LPJ_G0016557.1 mouse_genomes_project 1 166328342 166356441 + 4930523C07Rik protein_coding lincRNA MGP_LPJ_T0022844.1 MGP_LPJ_G0016557.1 mouse_genomes_project 1 166360113 166360413 + MGP_LPJ_P0022844 4930523C07Rik protein_coding protein_coding MGP_LPJ_T0012220.1 MGP_LPJ_G0010311.1 mouse_genomes_project 1 126180321 126181630 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023617.1 MGP_LPJ_G0016752.1 mouse_genomes_project 1 182329432 182786492 - MGP_LPJ_P0023617 Rgs7 protein_coding protein_coding MGP_LPJ_T0023618.1 MGP_LPJ_G0016752.1 mouse_genomes_project 1 182329433 182786268 - MGP_LPJ_P0023618 Rgs7 protein_coding protein_coding MGP_LPJ_T0023619.1 MGP_LPJ_G0016752.1 mouse_genomes_project 1 182329562 182786382 - MGP_LPJ_P0023619 Rgs7 protein_coding protein_coding MGP_LPJ_T0023620.1 MGP_LPJ_G0016752.1 mouse_genomes_project 1 182330079 182359626 - MGP_LPJ_P0023620 Rgs7 protein_coding protein_coding MGP_LPJ_T0023621.1 MGP_LPJ_G0016752.1 mouse_genomes_project 1 182330079 182785118 - MGP_LPJ_P0023621 Rgs7 protein_coding protein_coding MGP_LPJ_T0023622.1 MGP_LPJ_G0016752.1 mouse_genomes_project 1 182330079 182359686 - MGP_LPJ_P0023622 Rgs7 protein_coding protein_coding MGP_LPJ_T0023623.1 MGP_LPJ_G0016752.1 mouse_genomes_project 1 182330080 182349726 - MGP_LPJ_P0023623 Rgs7 protein_coding protein_coding MGP_LPJ_T0023624.1 MGP_LPJ_G0016752.1 mouse_genomes_project 1 182345614 182349246 - Rgs7 protein_coding retained_intron MGP_LPJ_T0022801.1 MGP_LPJ_G0016552.1 mouse_genomes_project 1 164431239 164545443 - MGP_LPJ_P0022801 Brinp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0022802.1 MGP_LPJ_G0016552.1 mouse_genomes_project 1 164431239 164545540 - MGP_LPJ_P0022802 Brinp2 protein_coding protein_coding MGP_LPJ_T0022803.1 MGP_LPJ_G0016552.1 mouse_genomes_project 1 164486775 164487521 - Brinp2 protein_coding processed_transcript MGP_LPJ_T0022804.1 MGP_LPJ_G0016552.1 mouse_genomes_project 1 164541493 164545509 - Brinp2 protein_coding retained_intron MGP_LPJ_T0098736.1 MGP_LPJ_G0036999.1 mouse_genomes_project 1 31965623 31965723 + Gm25792 snRNA snRNA MGP_LPJ_T0024147.1 MGP_LPJ_G0016859.1 mouse_genomes_project 1 199546184 199571229 + MGP_LPJ_P0024147 Tmem206 protein_coding protein_coding MGP_LPJ_T0098793.1 MGP_LPJ_G0037056.1 mouse_genomes_project 1 169885503 169885611 + Gm24940 snRNA snRNA MGP_LPJ_T0000660.1 MGP_LPJ_G0000595.1 mouse_genomes_project 1 135438830 135440515 - TEC TEC MGP_LPJ_T0022775.1 MGP_LPJ_G0016547.1 mouse_genomes_project 1 162943296 162965192 + MGP_LPJ_P0022775 Angptl1 protein_coding protein_coding MGP_LPJ_T0022776.1 MGP_LPJ_G0016547.1 mouse_genomes_project 1 162943699 162950373 + MGP_LPJ_P0022776 Angptl1 protein_coding protein_coding MGP_LPJ_T0100026.1 MGP_LPJ_G0038289.1 mouse_genomes_project 1 159388931 159389071 + Gm25588 snoRNA snoRNA MGP_LPJ_T0011978.1 MGP_LPJ_G0010069.1 mouse_genomes_project 1 33790740 33790975 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005851.1 MGP_LPJ_G0004907.1 mouse_genomes_project 1 92770154 92775981 + 4930434B07Rik lincRNA lincRNA MGP_LPJ_T0023038.1 MGP_LPJ_G0016596.1 mouse_genomes_project 1 170555852 170578052 + MGP_LPJ_P0023038 Sell protein_coding protein_coding MGP_LPJ_T0023039.1 MGP_LPJ_G0016596.1 mouse_genomes_project 1 170555955 170574543 + MGP_LPJ_P0023039 Sell protein_coding protein_coding MGP_LPJ_T0023040.1 MGP_LPJ_G0016596.1 mouse_genomes_project 1 170556059 170573563 + MGP_LPJ_P0023040 Sell protein_coding protein_coding MGP_LPJ_T0023041.1 MGP_LPJ_G0016596.1 mouse_genomes_project 1 170556059 170573567 + MGP_LPJ_P0023041 Sell protein_coding unknown_likely_coding MGP_LPJ_T0023042.1 MGP_LPJ_G0016596.1 mouse_genomes_project 1 170562832 170573867 + MGP_LPJ_P0023042 Sell protein_coding protein_coding MGP_LPJ_T0005701.1 MGP_LPJ_G0004798.1 mouse_genomes_project 1 34467523 34493134 - Gm37068 lincRNA lincRNA MGP_LPJ_T0021246.1 MGP_LPJ_G0016225.1 mouse_genomes_project 1 94126690 94128430 - Hes6 protein_coding retained_intron MGP_LPJ_T0021247.1 MGP_LPJ_G0016225.1 mouse_genomes_project 1 94126690 94128416 - Hes6 protein_coding retained_intron MGP_LPJ_T0021248.1 MGP_LPJ_G0016225.1 mouse_genomes_project 1 94126690 94128430 - MGP_LPJ_P0021248 Hes6 protein_coding protein_coding MGP_LPJ_T0021249.1 MGP_LPJ_G0016225.1 mouse_genomes_project 1 94127494 94128416 - Hes6 protein_coding retained_intron MGP_LPJ_T0021250.1 MGP_LPJ_G0016225.1 mouse_genomes_project 1 94127555 94129246 - Hes6 protein_coding processed_transcript MGP_LPJ_T0020334.1 MGP_LPJ_G0016046.1 mouse_genomes_project 1 73866621 73960642 + MGP_LPJ_P0020334 Xrcc5 protein_coding protein_coding MGP_LPJ_T0021107.1 MGP_LPJ_G0016191.1 mouse_genomes_project 1 90530542 90703616 + MGP_LPJ_P0021107 Ugt1a8 protein_coding protein_coding MGP_LPJ_T0100025.1 MGP_LPJ_G0038288.1 mouse_genomes_project 1 153898255 153898384 - Gm22966 snoRNA snoRNA MGP_LPJ_T0019632.1 MGP_LPJ_G0015918.1 mouse_genomes_project 1 51727029 51898556 - MGP_LPJ_P0019632 Myo1b protein_coding protein_coding MGP_LPJ_T0019633.1 MGP_LPJ_G0015918.1 mouse_genomes_project 1 51727246 51898426 - MGP_LPJ_P0019633 Myo1b protein_coding protein_coding MGP_LPJ_T0019634.1 MGP_LPJ_G0015918.1 mouse_genomes_project 1 51727253 51889801 - MGP_LPJ_P0019634 Myo1b protein_coding protein_coding MGP_LPJ_T0019635.1 MGP_LPJ_G0015918.1 mouse_genomes_project 1 51727258 51898413 - MGP_LPJ_P0019635 Myo1b protein_coding protein_coding MGP_LPJ_T0019636.1 MGP_LPJ_G0015918.1 mouse_genomes_project 1 51738873 51742991 - Myo1b protein_coding retained_intron MGP_LPJ_T0019637.1 MGP_LPJ_G0015918.1 mouse_genomes_project 1 51741042 51749398 - Myo1b protein_coding processed_transcript MGP_LPJ_T0019638.1 MGP_LPJ_G0015918.1 mouse_genomes_project 1 51741110 51745913 - Myo1b protein_coding retained_intron MGP_LPJ_T0019639.1 MGP_LPJ_G0015918.1 mouse_genomes_project 1 51745396 51754968 - Myo1b protein_coding processed_transcript MGP_LPJ_T0019640.1 MGP_LPJ_G0015918.1 mouse_genomes_project 1 51754924 51773746 - Myo1b protein_coding processed_transcript MGP_LPJ_T0019641.1 MGP_LPJ_G0015918.1 mouse_genomes_project 1 51758246 51760729 - Myo1b protein_coding retained_intron MGP_LPJ_T0019642.1 MGP_LPJ_G0015918.1 mouse_genomes_project 1 51775923 51879037 - MGP_LPJ_P0019642 Myo1b protein_coding protein_coding MGP_LPJ_T0019643.1 MGP_LPJ_G0015918.1 mouse_genomes_project 1 51777636 51801011 - Myo1b protein_coding processed_transcript MGP_LPJ_T0019644.1 MGP_LPJ_G0015918.1 mouse_genomes_project 1 51789560 51898397 - Myo1b protein_coding retained_intron MGP_LPJ_T0019645.1 MGP_LPJ_G0015918.1 mouse_genomes_project 1 51845150 51898406 - Myo1b protein_coding retained_intron MGP_LPJ_T0098094.1 MGP_LPJ_G0036375.1 mouse_genomes_project 1 155341562 155341671 - n-R5s218 rRNA rRNA MGP_LPJ_T0098733.1 MGP_LPJ_G0036996.1 mouse_genomes_project 1 30754592 30754699 - Gm25814 snRNA snRNA MGP_LPJ_T0012261.1 MGP_LPJ_G0010352.1 mouse_genomes_project 1 147876986 147877601 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098441.1 MGP_LPJ_G0036722.1 mouse_genomes_project 1 51097216 51099490 + Gm28320 sense_intronic sense_intronic MGP_LPJ_T0021411.1 MGP_LPJ_G0016262.1 mouse_genomes_project 1 96503138 96513294 + MGP_LPJ_P0021411 Bok protein_coding protein_coding MGP_LPJ_T0021412.1 MGP_LPJ_G0016262.1 mouse_genomes_project 1 96503180 96512740 + MGP_LPJ_P0021412 Bok protein_coding protein_coding MGP_LPJ_T0021413.1 MGP_LPJ_G0016262.1 mouse_genomes_project 1 96503741 96511613 + MGP_LPJ_P0021413 Bok protein_coding protein_coding MGP_LPJ_T0021414.1 MGP_LPJ_G0016262.1 mouse_genomes_project 1 96506684 96512999 + MGP_LPJ_P0021414 Bok protein_coding protein_coding MGP_LPJ_T0021415.1 MGP_LPJ_G0016262.1 mouse_genomes_project 1 96511358 96512985 + Bok protein_coding processed_transcript MGP_LPJ_T0022685.1 MGP_LPJ_G0016534.1 mouse_genomes_project 1 161863660 161867053 - Qsox1 protein_coding retained_intron MGP_LPJ_T0022686.1 MGP_LPJ_G0016534.1 mouse_genomes_project 1 161865789 161902797 - MGP_LPJ_P0022686 Qsox1 protein_coding protein_coding MGP_LPJ_T0022687.1 MGP_LPJ_G0016534.1 mouse_genomes_project 1 161865790 161902759 - MGP_LPJ_P0022687 Qsox1 protein_coding protein_coding MGP_LPJ_T0022688.1 MGP_LPJ_G0016534.1 mouse_genomes_project 1 161865793 161902752 - MGP_LPJ_P0022688 Qsox1 protein_coding protein_coding MGP_LPJ_T0022689.1 MGP_LPJ_G0016534.1 mouse_genomes_project 1 161867548 161869626 - Qsox1 protein_coding processed_transcript MGP_LPJ_T0022690.1 MGP_LPJ_G0016534.1 mouse_genomes_project 1 161881879 161902728 - Qsox1 protein_coding retained_intron MGP_LPJ_T0022691.1 MGP_LPJ_G0016534.1 mouse_genomes_project 1 161882053 161883128 - Qsox1 protein_coding retained_intron MGP_LPJ_T0022692.1 MGP_LPJ_G0016534.1 mouse_genomes_project 1 161889156 161902746 - Qsox1 protein_coding retained_intron MGP_LPJ_T0005932.1 MGP_LPJ_G0004975.1 mouse_genomes_project 1 141282862 141285668 + A430034D21Rik lincRNA lincRNA MGP_LPJ_T0020864.1 MGP_LPJ_G0016143.1 mouse_genomes_project 1 86465941 86790717 - MGP_LPJ_P0020864 Dner protein_coding protein_coding MGP_LPJ_T0020865.1 MGP_LPJ_G0016143.1 mouse_genomes_project 1 86633476 86790515 - Dner protein_coding retained_intron MGP_LPJ_T0020866.1 MGP_LPJ_G0016143.1 mouse_genomes_project 1 86666735 86737453 - MGP_LPJ_P0020866 Dner protein_coding protein_coding MGP_LPJ_T0020867.1 MGP_LPJ_G0016143.1 mouse_genomes_project 1 86669024 86720887 - MGP_LPJ_P0020867 Dner protein_coding protein_coding MGP_LPJ_T0101696.1 MGP_LPJ_G0039734.1 mouse_genomes_project 1 90627320 90627571 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0000752.1 MGP_LPJ_G0000685.1 mouse_genomes_project 1 167241341 167243090 + TEC TEC MGP_LPJ_T0022123.1 MGP_LPJ_G0016420.1 mouse_genomes_project 1 139121032 139157886 - MGP_LPJ_P0022123 Adora1 protein_coding protein_coding MGP_LPJ_T0022124.1 MGP_LPJ_G0016420.1 mouse_genomes_project 1 139121034 139158739 - MGP_LPJ_P0022124 Adora1 protein_coding protein_coding MGP_LPJ_T0022125.1 MGP_LPJ_G0016420.1 mouse_genomes_project 1 139123158 139158705 - MGP_LPJ_P0022125 Adora1 protein_coding protein_coding MGP_LPJ_T0022126.1 MGP_LPJ_G0016420.1 mouse_genomes_project 1 139125206 139158672 - MGP_LPJ_P0022126 Adora1 protein_coding protein_coding MGP_LPJ_T0020845.1 MGP_LPJ_G0016140.1 mouse_genomes_project 1 85239171 85261127 + Daw1 protein_coding retained_intron MGP_LPJ_T0020846.1 MGP_LPJ_G0016140.1 mouse_genomes_project 1 85239181 85294598 + MGP_LPJ_P0020846 Daw1 protein_coding protein_coding MGP_LPJ_T0020847.1 MGP_LPJ_G0016140.1 mouse_genomes_project 1 85239181 85294604 + MGP_LPJ_P0020847 Daw1 protein_coding protein_coding MGP_LPJ_T0020848.1 MGP_LPJ_G0016140.1 mouse_genomes_project 1 85239188 85294600 + MGP_LPJ_P0020848 Daw1 protein_coding nonsense_mediated_decay MGP_LPJ_T0020849.1 MGP_LPJ_G0016140.1 mouse_genomes_project 1 85239200 85294604 + MGP_LPJ_P0020849 Daw1 protein_coding protein_coding MGP_LPJ_T0098087.1 MGP_LPJ_G0036368.1 mouse_genomes_project 1 92156334 92156449 + Gm25180 rRNA rRNA MGP_LPJ_T0022406.1 MGP_LPJ_G0016480.1 mouse_genomes_project 1 149006810 149023401 + MGP_LPJ_P0022406 B3galt2 protein_coding protein_coding MGP_LPJ_T0098755.1 MGP_LPJ_G0037018.1 mouse_genomes_project 1 73778431 73778622 + Gm25360 snRNA snRNA MGP_LPJ_T0020557.1 MGP_LPJ_G0016091.1 mouse_genomes_project 1 76878308 76882492 + Ankzf1 protein_coding retained_intron MGP_LPJ_T0020558.1 MGP_LPJ_G0016091.1 mouse_genomes_project 1 76878317 76882942 + Ankzf1 protein_coding retained_intron MGP_LPJ_T0020559.1 MGP_LPJ_G0016091.1 mouse_genomes_project 1 76878317 76886795 + Ankzf1 protein_coding retained_intron MGP_LPJ_T0020560.1 MGP_LPJ_G0016091.1 mouse_genomes_project 1 76878317 76886795 + Ankzf1 protein_coding retained_intron MGP_LPJ_T0020561.1 MGP_LPJ_G0016091.1 mouse_genomes_project 1 76878317 76886795 + MGP_LPJ_P0020561 Ankzf1 protein_coding protein_coding MGP_LPJ_T0020562.1 MGP_LPJ_G0016091.1 mouse_genomes_project 1 76878317 76886795 + MGP_LPJ_P0020562 Ankzf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0020563.1 MGP_LPJ_G0016091.1 mouse_genomes_project 1 76878349 76882942 + MGP_LPJ_P0020563 Ankzf1 protein_coding protein_coding MGP_LPJ_T0020564.1 MGP_LPJ_G0016091.1 mouse_genomes_project 1 76883100 76884064 + Ankzf1 protein_coding retained_intron MGP_LPJ_T0020249.1 MGP_LPJ_G0016030.1 mouse_genomes_project 1 67925907 68006204 - MGP_LPJ_P0020249 Kansl1l protein_coding protein_coding MGP_LPJ_T0020250.1 MGP_LPJ_G0016030.1 mouse_genomes_project 1 67926022 68022480 - MGP_LPJ_P0020250 Kansl1l protein_coding protein_coding MGP_LPJ_T0020251.1 MGP_LPJ_G0016030.1 mouse_genomes_project 1 67942762 68022496 - MGP_LPJ_P0020251 Kansl1l protein_coding protein_coding MGP_LPJ_T0020252.1 MGP_LPJ_G0016030.1 mouse_genomes_project 1 67985965 68013767 - Kansl1l protein_coding processed_transcript MGP_LPJ_T0020253.1 MGP_LPJ_G0016030.1 mouse_genomes_project 1 68005735 68022480 - Kansl1l protein_coding retained_intron MGP_LPJ_T0018887.1 MGP_LPJ_G0015762.1 mouse_genomes_project 1 12379491 12382142 - MGP_LPJ_P0018887 Msc protein_coding protein_coding MGP_LPJ_T0018888.1 MGP_LPJ_G0015762.1 mouse_genomes_project 1 12379891 12381505 - MGP_LPJ_P0018888 Msc protein_coding protein_coding MGP_LPJ_T0018889.1 MGP_LPJ_G0015762.1 mouse_genomes_project 1 12380080 12380817 - Msc protein_coding retained_intron MGP_LPJ_T0018890.1 MGP_LPJ_G0015762.1 mouse_genomes_project 1 12380918 12382144 - Msc protein_coding retained_intron MGP_LPJ_T0000796.1 MGP_LPJ_G0000728.1 mouse_genomes_project 1 187694406 187696945 + TEC TEC MGP_LPJ_T0101713.1 MGP_LPJ_G0039751.1 mouse_genomes_project 1 121749535 121774798 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002768.1 MGP_LPJ_G0002640.1 mouse_genomes_project 1 634913 683004 + Gm1992 antisense antisense MGP_LPJ_T0099961.1 MGP_LPJ_G0038224.1 mouse_genomes_project 1 16769330 16769402 - Gm24075 snoRNA snoRNA MGP_LPJ_T0099993.1 MGP_LPJ_G0038256.1 mouse_genomes_project 1 81443943 81444069 - Gm24160 snoRNA snoRNA MGP_LPJ_T0002990.1 MGP_LPJ_G0002807.1 mouse_genomes_project 1 188685755 188691830 - 2210411M09Rik antisense antisense MGP_LPJ_T0012131.1 MGP_LPJ_G0010222.1 mouse_genomes_project 1 89517853 89518880 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101708.1 MGP_LPJ_G0039746.1 mouse_genomes_project 1 106607773 106672416 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0005698.1 MGP_LPJ_G0004796.1 mouse_genomes_project 1 33152565 33158808 - Gm37233 lincRNA lincRNA MGP_LPJ_T0002886.1 MGP_LPJ_G0002728.1 mouse_genomes_project 1 99877795 99915838 + Panct2 antisense antisense MGP_LPJ_T0002887.1 MGP_LPJ_G0002728.1 mouse_genomes_project 1 99878890 99888728 + Panct2 antisense antisense MGP_LPJ_T0002888.1 MGP_LPJ_G0002728.1 mouse_genomes_project 1 99878902 99884567 + Panct2 antisense antisense MGP_LPJ_T0000669.1 MGP_LPJ_G0000603.1 mouse_genomes_project 1 138666279 138669491 - TEC TEC MGP_LPJ_T0000777.1 MGP_LPJ_G0000710.1 mouse_genomes_project 1 179824118 179824979 + TEC TEC MGP_LPJ_T0023088.1 MGP_LPJ_G0016610.1 mouse_genomes_project 1 171873151 171898719 - protein_coding retained_intron MGP_LPJ_T0023089.1 MGP_LPJ_G0016610.1 mouse_genomes_project 1 171873980 172004455 - MGP_LPJ_P0023089 protein_coding unknown_likely_coding MGP_LPJ_T0023090.1 MGP_LPJ_G0016610.1 mouse_genomes_project 1 171897778 171946637 - MGP_LPJ_P0023090 protein_coding protein_coding MGP_LPJ_T0023091.1 MGP_LPJ_G0016610.1 mouse_genomes_project 1 171898208 171946652 - MGP_LPJ_P0023091 protein_coding protein_coding MGP_LPJ_T0023092.1 MGP_LPJ_G0016610.1 mouse_genomes_project 1 171916762 172004437 - protein_coding processed_transcript MGP_LPJ_T0000699.1 MGP_LPJ_G0000632.1 mouse_genomes_project 1 145560754 145564120 + TEC TEC MGP_LPJ_T0018752.1 MGP_LPJ_G0015741.1 mouse_genomes_project 1 7056296 7085090 + MGP_LPJ_P0018752 3110035E14Rik protein_coding protein_coding MGP_LPJ_T0005918.1 MGP_LPJ_G0004962.1 mouse_genomes_project 1 131378978 131383315 - 4930599A14Rik lincRNA lincRNA MGP_LPJ_T0005919.1 MGP_LPJ_G0004962.1 mouse_genomes_project 1 131381499 131383341 - 4930599A14Rik lincRNA lincRNA MGP_LPJ_T0005807.1 MGP_LPJ_G0004872.1 mouse_genomes_project 1 75020614 75038690 - Pinc lincRNA lincRNA MGP_LPJ_T0005808.1 MGP_LPJ_G0004872.1 mouse_genomes_project 1 75026370 75038690 - Pinc lincRNA lincRNA MGP_LPJ_T0020336.1 MGP_LPJ_G0016048.1 mouse_genomes_project 1 74155520 74202928 + Smarcal1 protein_coding retained_intron MGP_LPJ_T0020337.1 MGP_LPJ_G0016048.1 mouse_genomes_project 1 74155520 74174389 + Smarcal1 protein_coding retained_intron MGP_LPJ_T0020338.1 MGP_LPJ_G0016048.1 mouse_genomes_project 1 74155520 74171253 + Smarcal1 protein_coding retained_intron MGP_LPJ_T0020339.1 MGP_LPJ_G0016048.1 mouse_genomes_project 1 74155520 74209146 + MGP_LPJ_P0020339 Smarcal1 protein_coding protein_coding MGP_LPJ_T0020340.1 MGP_LPJ_G0016048.1 mouse_genomes_project 1 74155520 74158261 + MGP_LPJ_P0020340 Smarcal1 protein_coding protein_coding MGP_LPJ_T0020341.1 MGP_LPJ_G0016048.1 mouse_genomes_project 1 74155520 74170813 + MGP_LPJ_P0020341 Smarcal1 protein_coding protein_coding MGP_LPJ_T0020342.1 MGP_LPJ_G0016048.1 mouse_genomes_project 1 74155884 74209146 + MGP_LPJ_P0020342 Smarcal1 protein_coding protein_coding MGP_LPJ_T0020343.1 MGP_LPJ_G0016048.1 mouse_genomes_project 1 74157907 74202928 + Smarcal1 protein_coding retained_intron MGP_LPJ_T0020344.1 MGP_LPJ_G0016048.1 mouse_genomes_project 1 74191511 74204311 + Smarcal1 protein_coding retained_intron MGP_LPJ_T0019152.1 MGP_LPJ_G0015821.1 mouse_genomes_project 1 33162721 33166283 - MGP_LPJ_P0019152 Ccdc115 protein_coding protein_coding MGP_LPJ_T0019153.1 MGP_LPJ_G0015821.1 mouse_genomes_project 1 33162729 33165322 - Ccdc115 protein_coding retained_intron MGP_LPJ_T0024027.1 MGP_LPJ_G0016836.1 mouse_genomes_project 1 194691096 194717708 - MGP_LPJ_P0024027 Rrp15 protein_coding protein_coding MGP_LPJ_T0024028.1 MGP_LPJ_G0016836.1 mouse_genomes_project 1 194691210 194717675 - Rrp15 protein_coding retained_intron MGP_LPJ_T0020920.1 MGP_LPJ_G0016155.1 mouse_genomes_project 1 88363146 88371228 + MGP_LPJ_P0020920 Spata3 protein_coding protein_coding MGP_LPJ_T0020921.1 MGP_LPJ_G0016155.1 mouse_genomes_project 1 88363147 88365873 + MGP_LPJ_P0020921 Spata3 protein_coding protein_coding MGP_LPJ_T0020922.1 MGP_LPJ_G0016155.1 mouse_genomes_project 1 88363150 88365875 + MGP_LPJ_P0020922 Spata3 protein_coding protein_coding MGP_LPJ_T0020923.1 MGP_LPJ_G0016155.1 mouse_genomes_project 1 88363150 88371228 + MGP_LPJ_P0020923 Spata3 protein_coding protein_coding MGP_LPJ_T0020924.1 MGP_LPJ_G0016155.1 mouse_genomes_project 1 88363150 88368380 + MGP_LPJ_P0020924 Spata3 protein_coding protein_coding MGP_LPJ_T0020925.1 MGP_LPJ_G0016155.1 mouse_genomes_project 1 88363157 88371191 + MGP_LPJ_P0020925 Spata3 protein_coding protein_coding MGP_LPJ_T0020926.1 MGP_LPJ_G0016155.1 mouse_genomes_project 1 88363164 88370532 + MGP_LPJ_P0020926 Spata3 protein_coding protein_coding MGP_LPJ_T0020927.1 MGP_LPJ_G0016155.1 mouse_genomes_project 1 88363165 88365876 + MGP_LPJ_P0020927 Spata3 protein_coding protein_coding MGP_LPJ_T0020928.1 MGP_LPJ_G0016155.1 mouse_genomes_project 1 88363309 88370534 + MGP_LPJ_P0020928 Spata3 protein_coding protein_coding MGP_LPJ_T0011903.1 MGP_LPJ_G0009994.1 mouse_genomes_project 1 10173362 10174049 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000557.1 MGP_LPJ_G0000492.1 mouse_genomes_project 1 78935218 78938997 - TEC TEC MGP_LPJ_T0002842.1 MGP_LPJ_G0002693.1 mouse_genomes_project 1 62738321 62831988 - Pard3bos1 antisense antisense MGP_LPJ_T0002843.1 MGP_LPJ_G0002693.1 mouse_genomes_project 1 62759997 62832066 - Pard3bos1 antisense antisense MGP_LPJ_T0023555.1 MGP_LPJ_G0016716.1 mouse_genomes_project 1 180135195 180137207 - MGP_LPJ_P0023555 Olfr1406 protein_coding protein_coding MGP_LPJ_T0098460.1 MGP_LPJ_G0036740.1 mouse_genomes_project 1 158608416 158631450 - Gm28792 sense_intronic sense_intronic MGP_LPJ_T0020502.1 MGP_LPJ_G0016080.1 mouse_genomes_project 1 76615459 76619361 - MGP_LPJ_P0020502 Fev protein_coding protein_coding MGP_LPJ_T0020503.1 MGP_LPJ_G0016080.1 mouse_genomes_project 1 76615956 76619264 - MGP_LPJ_P0020503 Fev protein_coding protein_coding MGP_LPJ_T0020504.1 MGP_LPJ_G0016080.1 mouse_genomes_project 1 76616357 76618549 - Fev protein_coding retained_intron MGP_LPJ_T0012366.1 MGP_LPJ_G0010457.1 mouse_genomes_project 1 199187878 199188305 - processed_pseudogene processed_pseudogene MGP_LPJ_T0022557.1 MGP_LPJ_G0016507.1 mouse_genomes_project 1 158630187 158637698 + MGP_LPJ_P0022557 Apobec4 protein_coding protein_coding MGP_LPJ_T0020287.1 MGP_LPJ_G0016037.1 mouse_genomes_project 1 71260445 71709148 + Spag16 protein_coding processed_transcript MGP_LPJ_T0020288.1 MGP_LPJ_G0016037.1 mouse_genomes_project 1 71260446 71709049 + Spag16 protein_coding processed_transcript MGP_LPJ_T0020289.1 MGP_LPJ_G0016037.1 mouse_genomes_project 1 71260463 72186381 + MGP_LPJ_P0020289 Spag16 protein_coding protein_coding MGP_LPJ_T0020290.1 MGP_LPJ_G0016037.1 mouse_genomes_project 1 71260467 71359209 + MGP_LPJ_P0020290 Spag16 protein_coding protein_coding MGP_LPJ_T0020291.1 MGP_LPJ_G0016037.1 mouse_genomes_project 1 71265174 71308338 + Spag16 protein_coding processed_transcript MGP_LPJ_T0020292.1 MGP_LPJ_G0016037.1 mouse_genomes_project 1 71383677 72186381 + Spag16 protein_coding processed_transcript MGP_LPJ_T0020293.1 MGP_LPJ_G0016037.1 mouse_genomes_project 1 71383704 71723876 + Spag16 protein_coding processed_transcript MGP_LPJ_T0019568.1 MGP_LPJ_G0015903.1 mouse_genomes_project 1 43511176 43512955 + Ercc5 protein_coding retained_intron MGP_LPJ_T0019569.1 MGP_LPJ_G0015903.1 mouse_genomes_project 1 43511279 43547176 + Ercc5 protein_coding retained_intron MGP_LPJ_T0019570.1 MGP_LPJ_G0015903.1 mouse_genomes_project 1 43511279 43547176 + MGP_LPJ_P0019570 Ercc5 protein_coding protein_coding MGP_LPJ_T0019571.1 MGP_LPJ_G0015903.1 mouse_genomes_project 1 43511341 43526492 + Ercc5 protein_coding processed_transcript MGP_LPJ_T0019572.1 MGP_LPJ_G0015903.1 mouse_genomes_project 1 43511364 43522903 + Ercc5 protein_coding processed_transcript MGP_LPJ_T0019573.1 MGP_LPJ_G0015903.1 mouse_genomes_project 1 43521582 43531646 + Ercc5 protein_coding retained_intron MGP_LPJ_T0019574.1 MGP_LPJ_G0015903.1 mouse_genomes_project 1 43523477 43531865 + Ercc5 protein_coding retained_intron MGP_LPJ_T0099989.1 MGP_LPJ_G0038252.1 mouse_genomes_project 1 64206424 64206556 + Snora41 snoRNA snoRNA MGP_LPJ_T0012104.1 MGP_LPJ_G0010195.1 mouse_genomes_project 1 77279570 77280062 + processed_pseudogene processed_pseudogene MGP_LPJ_T0023820.1 MGP_LPJ_G0016789.1 mouse_genomes_project 1 188433135 188463580 + MGP_LPJ_P0023820 Acbd3 protein_coding protein_coding MGP_LPJ_T0023821.1 MGP_LPJ_G0016789.1 mouse_genomes_project 1 188436949 188443571 + Acbd3 protein_coding retained_intron MGP_LPJ_T0009500.1 MGP_LPJ_G0007618.1 mouse_genomes_project 1 38253751 38253848 - Mir6349 miRNA miRNA MGP_LPJ_T0101463.1 MGP_LPJ_G0039618.1 mouse_genomes_project 1 19196482 19223299 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101464.1 MGP_LPJ_G0039618.1 mouse_genomes_project 1 19209993 19223114 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0101465.1 MGP_LPJ_G0039618.1 mouse_genomes_project 1 19214971 19223234 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0009509.1 MGP_LPJ_G0007627.1 mouse_genomes_project 1 64189695 64189782 + Gm24557 miRNA miRNA MGP_LPJ_T0023871.1 MGP_LPJ_G0016802.1 mouse_genomes_project 1 189278691 189280614 - MGP_LPJ_P0023871 Ccdc121 protein_coding protein_coding MGP_LPJ_T0000743.1 MGP_LPJ_G0000676.1 mouse_genomes_project 1 166517837 166519711 + TEC TEC MGP_LPJ_T0000564.1 MGP_LPJ_G0000499.1 mouse_genomes_project 1 82230853 82232538 - TEC TEC MGP_LPJ_T0101229.1 MGP_LPJ_G0039484.1 mouse_genomes_project 1 162940022 162942655 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101230.1 MGP_LPJ_G0039484.1 mouse_genomes_project 1 162940344 162940671 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0009555.1 MGP_LPJ_G0007673.1 mouse_genomes_project 1 159906690 159906801 + Mir8114 miRNA miRNA MGP_LPJ_T0018909.1 MGP_LPJ_G0015769.1 mouse_genomes_project 1 13789945 13819813 + MGP_LPJ_P0018909 Rdh10 protein_coding protein_coding MGP_LPJ_T0018910.1 MGP_LPJ_G0015769.1 mouse_genomes_project 1 13816650 13818696 + Rdh10 protein_coding retained_intron MGP_LPJ_T0012221.1 MGP_LPJ_G0010312.1 mouse_genomes_project 1 126412461 126413296 + processed_pseudogene processed_pseudogene MGP_LPJ_T0019409.1 MGP_LPJ_G0015867.1 mouse_genomes_project 1 37995586 38006740 + MGP_LPJ_P0019409 Nms protein_coding protein_coding MGP_LPJ_T0019410.1 MGP_LPJ_G0015867.1 mouse_genomes_project 1 37995640 38005072 + MGP_LPJ_P0019410 Nms protein_coding protein_coding MGP_LPJ_T0000440.1 MGP_LPJ_G0000376.1 mouse_genomes_project 1 23369664 23371194 - TEC TEC MGP_LPJ_T0020868.1 MGP_LPJ_G0016144.1 mouse_genomes_project 1 86808430 86936451 - MGP_LPJ_P0020868 Trip12 protein_coding unknown_likely_coding MGP_LPJ_T0020869.1 MGP_LPJ_G0016144.1 mouse_genomes_project 1 86808431 86937713 - MGP_LPJ_P0020869 Trip12 protein_coding protein_coding MGP_LPJ_T0020870.1 MGP_LPJ_G0016144.1 mouse_genomes_project 1 86808431 86936501 - MGP_LPJ_P0020870 Trip12 protein_coding protein_coding MGP_LPJ_T0020871.1 MGP_LPJ_G0016144.1 mouse_genomes_project 1 86811506 86936485 - MGP_LPJ_P0020871 Trip12 protein_coding protein_coding MGP_LPJ_T0020872.1 MGP_LPJ_G0016144.1 mouse_genomes_project 1 86811506 86838051 - MGP_LPJ_P0020872 Trip12 protein_coding protein_coding MGP_LPJ_T0020873.1 MGP_LPJ_G0016144.1 mouse_genomes_project 1 86811819 86820454 - MGP_LPJ_P0020873 Trip12 protein_coding nonsense_mediated_decay MGP_LPJ_T0020874.1 MGP_LPJ_G0016144.1 mouse_genomes_project 1 86813452 86817627 - Trip12 protein_coding retained_intron MGP_LPJ_T0020875.1 MGP_LPJ_G0016144.1 mouse_genomes_project 1 86817357 86820525 - Trip12 protein_coding retained_intron MGP_LPJ_T0020876.1 MGP_LPJ_G0016144.1 mouse_genomes_project 1 86833501 86843175 - MGP_LPJ_P0020876 Trip12 protein_coding nonsense_mediated_decay MGP_LPJ_T0020877.1 MGP_LPJ_G0016144.1 mouse_genomes_project 1 86837931 86839317 - Trip12 protein_coding retained_intron MGP_LPJ_T0020878.1 MGP_LPJ_G0016144.1 mouse_genomes_project 1 86837992 86936508 - MGP_LPJ_P0020878 Trip12 protein_coding nonsense_mediated_decay MGP_LPJ_T0020879.1 MGP_LPJ_G0016144.1 mouse_genomes_project 1 86843173 86936501 - MGP_LPJ_P0020879 Trip12 protein_coding protein_coding MGP_LPJ_T0020880.1 MGP_LPJ_G0016144.1 mouse_genomes_project 1 86845419 86848955 - Trip12 protein_coding retained_intron MGP_LPJ_T0020881.1 MGP_LPJ_G0016144.1 mouse_genomes_project 1 86855594 86856359 - Trip12 protein_coding retained_intron MGP_LPJ_T0020882.1 MGP_LPJ_G0016144.1 mouse_genomes_project 1 86855630 86885254 - MGP_LPJ_P0020882 Trip12 protein_coding protein_coding MGP_LPJ_T0020883.1 MGP_LPJ_G0016144.1 mouse_genomes_project 1 86871991 86876011 - Trip12 protein_coding retained_intron MGP_LPJ_T0020884.1 MGP_LPJ_G0016144.1 mouse_genomes_project 1 86872457 86936498 - MGP_LPJ_P0020884 Trip12 protein_coding protein_coding MGP_LPJ_T0020885.1 MGP_LPJ_G0016144.1 mouse_genomes_project 1 86885689 86937463 - MGP_LPJ_P0020885 Trip12 protein_coding protein_coding MGP_LPJ_T0020886.1 MGP_LPJ_G0016144.1 mouse_genomes_project 1 86885933 86936070 - MGP_LPJ_P0020886 Trip12 protein_coding protein_coding MGP_LPJ_T0006071.1 MGP_LPJ_G0005082.1 mouse_genomes_project 1 198572031 198597300 - Gm30725 lincRNA lincRNA MGP_LPJ_T0021017.1 MGP_LPJ_G0016178.1 mouse_genomes_project 1 89668291 89721975 + MGP_LPJ_P0021017 Efhd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0021018.1 MGP_LPJ_G0016178.1 mouse_genomes_project 1 89668291 89721978 + MGP_LPJ_P0021018 Efhd1 protein_coding protein_coding MGP_LPJ_T0021019.1 MGP_LPJ_G0016178.1 mouse_genomes_project 1 89720364 89720881 + Efhd1 protein_coding processed_transcript MGP_LPJ_T0005769.1 MGP_LPJ_G0004843.1 mouse_genomes_project 1 61731172 61736326 - Gm11579 lincRNA lincRNA MGP_LPJ_T0009512.1 MGP_LPJ_G0007630.1 mouse_genomes_project 1 65113403 65113467 - Mir6899 miRNA miRNA MGP_LPJ_T0021445.1 MGP_LPJ_G0016268.1 mouse_genomes_project 1 96697637 96775432 + MGP_LPJ_P0021445 protein_coding protein_coding MGP_LPJ_T0021447.1 MGP_LPJ_G0016268.1 mouse_genomes_project 1 96702082 96774082 + MGP_LPJ_P0021447 protein_coding protein_coding MGP_LPJ_T0012096.1 MGP_LPJ_G0010187.1 mouse_genomes_project 1 72993979 72994057 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012178.1 MGP_LPJ_G0010269.1 mouse_genomes_project 1 111502081 111502267 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100014.1 MGP_LPJ_G0038277.1 mouse_genomes_project 1 127679308 127679439 - Gm24791 snoRNA snoRNA MGP_LPJ_T0000446.1 MGP_LPJ_G0000382.1 mouse_genomes_project 1 23460906 23464215 - TEC TEC MGP_LPJ_T0098085.1 MGP_LPJ_G0036366.1 mouse_genomes_project 1 85300700 85300821 - n-R5s214 rRNA rRNA MGP_LPJ_T0019034.1 MGP_LPJ_G0015801.1 mouse_genomes_project 1 22026639 22036357 - MGP_LPJ_P0019034 Sdhaf4 protein_coding protein_coding MGP_LPJ_T0019035.1 MGP_LPJ_G0015801.1 mouse_genomes_project 1 22033666 22036331 - Sdhaf4 protein_coding processed_transcript MGP_LPJ_T0100039.1 MGP_LPJ_G0038302.1 mouse_genomes_project 1 167378994 167379071 + Snord47 snoRNA snoRNA MGP_LPJ_T0021256.1 MGP_LPJ_G0016228.1 mouse_genomes_project 1 94253522 94259880 + Asb1 protein_coding processed_transcript MGP_LPJ_T0021257.1 MGP_LPJ_G0016228.1 mouse_genomes_project 1 94253687 94269395 + MGP_LPJ_P0021257 Asb1 protein_coding protein_coding MGP_LPJ_T0021258.1 MGP_LPJ_G0016228.1 mouse_genomes_project 1 94253687 94269395 + MGP_LPJ_P0021258 Asb1 protein_coding protein_coding MGP_LPJ_T0021259.1 MGP_LPJ_G0016228.1 mouse_genomes_project 1 94253768 94269449 + MGP_LPJ_P0021259 Asb1 protein_coding protein_coding MGP_LPJ_T0021260.1 MGP_LPJ_G0016228.1 mouse_genomes_project 1 94254035 94265704 + MGP_LPJ_P0021260 Asb1 protein_coding protein_coding MGP_LPJ_T0021261.1 MGP_LPJ_G0016228.1 mouse_genomes_project 1 94254035 94269688 + MGP_LPJ_P0021261 Asb1 protein_coding protein_coding MGP_LPJ_T0012194.1 MGP_LPJ_G0010285.1 mouse_genomes_project 1 115899317 115899982 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012123.1 MGP_LPJ_G0010214.1 mouse_genomes_project 1 85237403 85238437 + processed_pseudogene processed_pseudogene MGP_LPJ_T0019976.1 MGP_LPJ_G0015980.1 mouse_genomes_project 1 60108304 60208202 + MGP_LPJ_P0019976 Cdk15 protein_coding protein_coding MGP_LPJ_T0019977.1 MGP_LPJ_G0015980.1 mouse_genomes_project 1 60108305 60207672 + MGP_LPJ_P0019977 Cdk15 protein_coding protein_coding MGP_LPJ_T0019978.1 MGP_LPJ_G0015980.1 mouse_genomes_project 1 60108526 60109277 + Cdk15 protein_coding processed_transcript MGP_LPJ_T0019979.1 MGP_LPJ_G0015980.1 mouse_genomes_project 1 60150619 60207751 + Cdk15 protein_coding processed_transcript MGP_LPJ_T0000587.1 MGP_LPJ_G0000522.1 mouse_genomes_project 1 89274552 89276863 + TEC TEC MGP_LPJ_T0000577.1 MGP_LPJ_G0000512.1 mouse_genomes_project 1 86484476 86487373 - TEC TEC MGP_LPJ_T0022991.1 MGP_LPJ_G0016583.1 mouse_genomes_project 1 169293602 169326394 - MGP_LPJ_P0022991 Fmo1 protein_coding protein_coding MGP_LPJ_T0022992.1 MGP_LPJ_G0016583.1 mouse_genomes_project 1 169293808 169294515 - Fmo1 protein_coding processed_transcript MGP_LPJ_T0022993.1 MGP_LPJ_G0016583.1 mouse_genomes_project 1 169294091 169298706 - Fmo1 protein_coding processed_transcript MGP_LPJ_T0022994.1 MGP_LPJ_G0016583.1 mouse_genomes_project 1 169295601 169298706 - Fmo1 protein_coding retained_intron MGP_LPJ_T0022995.1 MGP_LPJ_G0016583.1 mouse_genomes_project 1 169297838 169318082 - MGP_LPJ_P0022995 Fmo1 protein_coding protein_coding MGP_LPJ_T0022996.1 MGP_LPJ_G0016583.1 mouse_genomes_project 1 169300303 169317940 - MGP_LPJ_P0022996 Fmo1 protein_coding protein_coding MGP_LPJ_T0022997.1 MGP_LPJ_G0016583.1 mouse_genomes_project 1 169300329 169317834 - MGP_LPJ_P0022997 Fmo1 protein_coding protein_coding MGP_LPJ_T0101705.1 MGP_LPJ_G0039743.1 mouse_genomes_project 1 105371306 105371886 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0021599.1 MGP_LPJ_G0016309.1 mouse_genomes_project 1 122351831 122364094 + MGP_LPJ_P0021599 Nifk protein_coding protein_coding MGP_LPJ_T0021600.1 MGP_LPJ_G0016309.1 mouse_genomes_project 1 122351846 122363213 + MGP_LPJ_P0021600 Nifk protein_coding protein_coding MGP_LPJ_T0021601.1 MGP_LPJ_G0016309.1 mouse_genomes_project 1 122352145 122359652 + MGP_LPJ_P0021601 Nifk protein_coding protein_coding MGP_LPJ_T0000434.1 MGP_LPJ_G0000372.1 mouse_genomes_project 1 19794155 19795478 - TEC TEC MGP_LPJ_T0000631.1 MGP_LPJ_G0000566.1 mouse_genomes_project 1 127095777 127097364 + TEC TEC MGP_LPJ_T0021178.1 MGP_LPJ_G0016213.1 mouse_genomes_project 1 93604796 93646606 + MGP_LPJ_P0021178 Mlph protein_coding protein_coding MGP_LPJ_T0021179.1 MGP_LPJ_G0016213.1 mouse_genomes_project 1 93617387 93618141 + MGP_LPJ_P0021179 Mlph protein_coding protein_coding MGP_LPJ_T0021180.1 MGP_LPJ_G0016213.1 mouse_genomes_project 1 93633238 93634309 + Mlph protein_coding retained_intron MGP_LPJ_T0000786.1 MGP_LPJ_G0000719.1 mouse_genomes_project 1 184384693 184386590 - TEC TEC MGP_LPJ_T0002773.1 MGP_LPJ_G0002643.1 mouse_genomes_project 1 7207532 7259728 + 1700034P13Rik antisense antisense MGP_LPJ_T0002774.1 MGP_LPJ_G0002643.1 mouse_genomes_project 1 7207840 7258482 + 1700034P13Rik antisense antisense MGP_LPJ_T0002775.1 MGP_LPJ_G0002643.1 mouse_genomes_project 1 7208365 7236238 + 1700034P13Rik antisense antisense MGP_LPJ_T0002776.1 MGP_LPJ_G0002643.1 mouse_genomes_project 1 7208471 7236077 + 1700034P13Rik antisense antisense MGP_LPJ_T0002777.1 MGP_LPJ_G0002643.1 mouse_genomes_project 1 7250834 7258329 + 1700034P13Rik antisense antisense MGP_LPJ_T0000392.1 MGP_LPJ_G0000330.1 mouse_genomes_project 1 1576255 1577739 - TEC TEC MGP_LPJ_T0011259.1 MGP_LPJ_G0009377.1 mouse_genomes_project 1 47507067 47507337 - Gm23829 misc_RNA misc_RNA MGP_LPJ_T0098438.1 MGP_LPJ_G0036719.1 mouse_genomes_project 1 830989 842629 - Gm19938 sense_intronic sense_intronic MGP_LPJ_T0000756.1 MGP_LPJ_G0000689.1 mouse_genomes_project 1 167341516 167342267 - TEC TEC MGP_LPJ_T0000604.1 MGP_LPJ_G0000539.1 mouse_genomes_project 1 96345131 96347518 + TEC TEC MGP_LPJ_T0011969.1 MGP_LPJ_G0010060.1 mouse_genomes_project 1 33361064 33361487 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000747.1 MGP_LPJ_G0000680.1 mouse_genomes_project 1 166925444 166927520 - TEC TEC MGP_LPJ_T0101730.1 MGP_LPJ_G0039768.1 mouse_genomes_project 1 180904146 181136283 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0005866.1 MGP_LPJ_G0004922.1 mouse_genomes_project 1 95914154 95915319 - Gm28086 lincRNA lincRNA MGP_LPJ_T0098442.1 MGP_LPJ_G0036723.1 mouse_genomes_project 1 51828285 51829564 - Gm29453 sense_intronic sense_intronic MGP_LPJ_T0012359.1 MGP_LPJ_G0010450.1 mouse_genomes_project 1 194986370 194986968 - processed_pseudogene processed_pseudogene MGP_LPJ_T0020894.1 MGP_LPJ_G0016148.1 mouse_genomes_project 1 87880707 87884974 - MGP_LPJ_P0020894 protein_coding protein_coding MGP_LPJ_T0003001.1 MGP_LPJ_G0002817.1 mouse_genomes_project 1 195612106 195647505 - Gm36388 antisense antisense MGP_LPJ_T0012346.1 MGP_LPJ_G0010437.1 mouse_genomes_project 1 188605299 188605748 + processed_pseudogene processed_pseudogene MGP_LPJ_T0022728.1 MGP_LPJ_G0016541.1 mouse_genomes_project 1 162386081 162484445 - MGP_LPJ_P0022728 Axdnd1 protein_coding protein_coding MGP_LPJ_T0022729.1 MGP_LPJ_G0016541.1 mouse_genomes_project 1 162386081 162481621 - MGP_LPJ_P0022729 Axdnd1 protein_coding protein_coding MGP_LPJ_T0022730.1 MGP_LPJ_G0016541.1 mouse_genomes_project 1 162393216 162482739 - MGP_LPJ_P0022730 Axdnd1 protein_coding unknown_likely_coding MGP_LPJ_T0022731.1 MGP_LPJ_G0016541.1 mouse_genomes_project 1 162393216 162481693 - MGP_LPJ_P0022731 Axdnd1 protein_coding unknown_likely_coding MGP_LPJ_T0022732.1 MGP_LPJ_G0016541.1 mouse_genomes_project 1 162419293 162434769 - Axdnd1 protein_coding processed_transcript MGP_LPJ_T0022733.1 MGP_LPJ_G0016541.1 mouse_genomes_project 1 162423744 162461099 - Axdnd1 protein_coding processed_transcript MGP_LPJ_T0022734.1 MGP_LPJ_G0016541.1 mouse_genomes_project 1 162424345 162459657 - MGP_LPJ_P0022734 Axdnd1 protein_coding protein_coding MGP_LPJ_T0022735.1 MGP_LPJ_G0016541.1 mouse_genomes_project 1 162461147 162463856 - Axdnd1 protein_coding processed_transcript MGP_LPJ_T0022736.1 MGP_LPJ_G0016541.1 mouse_genomes_project 1 162481671 162483197 - MGP_LPJ_P0022736 Axdnd1 protein_coding protein_coding MGP_LPJ_T0022737.1 MGP_LPJ_G0016541.1 mouse_genomes_project 1 162481671 162483233 - MGP_LPJ_P0022737 Axdnd1 protein_coding protein_coding MGP_LPJ_T0000529.1 MGP_LPJ_G0000464.1 mouse_genomes_project 1 62779521 62780441 + TEC TEC MGP_LPJ_T0012340.1 MGP_LPJ_G0010431.1 mouse_genomes_project 1 184626237 184626554 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002924.1 MGP_LPJ_G0002753.1 mouse_genomes_project 1 141146281 141149527 - Gm37759 antisense antisense MGP_LPJ_T0019244.1 MGP_LPJ_G0015839.1 mouse_genomes_project 1 35412336 35428710 + MGP_LPJ_P0019244 Cnnm3 protein_coding protein_coding MGP_LPJ_T0019245.1 MGP_LPJ_G0015839.1 mouse_genomes_project 1 35412336 35428710 + MGP_LPJ_P0019245 Cnnm3 protein_coding protein_coding MGP_LPJ_T0019246.1 MGP_LPJ_G0015839.1 mouse_genomes_project 1 35413566 35420908 + Cnnm3 protein_coding retained_intron MGP_LPJ_T0019247.1 MGP_LPJ_G0015839.1 mouse_genomes_project 1 35419041 35420047 + Cnnm3 protein_coding retained_intron MGP_LPJ_T0019248.1 MGP_LPJ_G0015839.1 mouse_genomes_project 1 35421233 35426073 + Cnnm3 protein_coding retained_intron MGP_LPJ_T0021732.1 MGP_LPJ_G0016334.1 mouse_genomes_project 1 130000424 130008377 + MGP_LPJ_P0021732 Slc35f5 protein_coding protein_coding MGP_LPJ_T0021733.1 MGP_LPJ_G0016334.1 mouse_genomes_project 1 130000845 130035430 + MGP_LPJ_P0021733 Slc35f5 protein_coding protein_coding MGP_LPJ_T0021734.1 MGP_LPJ_G0016334.1 mouse_genomes_project 1 130024122 130034758 + MGP_LPJ_P0021734 Slc35f5 protein_coding nonsense_mediated_decay MGP_LPJ_T0012217.1 MGP_LPJ_G0010308.1 mouse_genomes_project 1 125692385 125692604 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000596.1 MGP_LPJ_G0000531.1 mouse_genomes_project 1 92425319 92427352 + TEC TEC MGP_LPJ_T0100037.1 MGP_LPJ_G0038300.1 mouse_genomes_project 1 167378507 167378588 + Snord80 snoRNA snoRNA MGP_LPJ_T0012048.1 MGP_LPJ_G0010139.1 mouse_genomes_project 1 58231080 58231972 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099959.1 MGP_LPJ_G0038222.1 mouse_genomes_project 1 13430940 13431072 + Gm25168 snoRNA snoRNA MGP_LPJ_T0020012.1 MGP_LPJ_G0015986.1 mouse_genomes_project 1 60821650 60897073 + MGP_LPJ_P0020012 Fam117b protein_coding protein_coding MGP_LPJ_T0020013.1 MGP_LPJ_G0015986.1 mouse_genomes_project 1 60881720 60893242 + MGP_LPJ_P0020013 Fam117b protein_coding nonsense_mediated_decay MGP_LPJ_T0020014.1 MGP_LPJ_G0015986.1 mouse_genomes_project 1 60890907 60892665 + Fam117b protein_coding retained_intron MGP_LPJ_T0012317.1 MGP_LPJ_G0010408.1 mouse_genomes_project 1 172297151 172298213 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023557.1 MGP_LPJ_G0016718.1 mouse_genomes_project 1 180174756 180175790 + MGP_LPJ_P0023557 Olfr1404 protein_coding protein_coding MGP_LPJ_T0098777.1 MGP_LPJ_G0037040.1 mouse_genomes_project 1 133112257 133112362 - Gm25384 snRNA snRNA MGP_LPJ_T0005987.1 MGP_LPJ_G0005016.1 mouse_genomes_project 1 169778420 169780243 - Gm26523 lincRNA lincRNA MGP_LPJ_T0005824.1 MGP_LPJ_G0004884.1 mouse_genomes_project 1 80464229 80479737 - 5730419F03Rik lincRNA lincRNA MGP_LPJ_T0005746.1 MGP_LPJ_G0004826.1 mouse_genomes_project 1 50746333 50748660 + Gm28321 lincRNA lincRNA MGP_LPJ_T0018960.1 MGP_LPJ_G0015779.1 mouse_genomes_project 1 15885493 15917988 - Crisp4 protein_coding retained_intron MGP_LPJ_T0018961.1 MGP_LPJ_G0015779.1 mouse_genomes_project 1 15885493 15917994 - MGP_LPJ_P0018961 Crisp4 protein_coding protein_coding MGP_LPJ_T0018962.1 MGP_LPJ_G0015779.1 mouse_genomes_project 1 15885506 15907381 - MGP_LPJ_P0018962 Crisp4 protein_coding protein_coding MGP_LPJ_T0018963.1 MGP_LPJ_G0015779.1 mouse_genomes_project 1 15885902 15917994 - MGP_LPJ_P0018963 Crisp4 protein_coding protein_coding MGP_LPJ_T0098804.1 MGP_LPJ_G0037067.1 mouse_genomes_project 1 183097429 183097605 + Gm25560 snRNA snRNA MGP_LPJ_T0020976.1 MGP_LPJ_G0016167.1 mouse_genomes_project 1 88962961 88995553 + MGP_LPJ_P0020976 Cops7b protein_coding protein_coding MGP_LPJ_T0020977.1 MGP_LPJ_G0016167.1 mouse_genomes_project 1 88962995 88972608 + MGP_LPJ_P0020977 Cops7b protein_coding protein_coding MGP_LPJ_T0020978.1 MGP_LPJ_G0016167.1 mouse_genomes_project 1 88970414 88991031 + MGP_LPJ_P0020978 Cops7b protein_coding protein_coding MGP_LPJ_T0020979.1 MGP_LPJ_G0016167.1 mouse_genomes_project 1 88970445 88990857 + MGP_LPJ_P0020979 Cops7b protein_coding nonsense_mediated_decay MGP_LPJ_T0020980.1 MGP_LPJ_G0016167.1 mouse_genomes_project 1 88970456 88991509 + MGP_LPJ_P0020980 Cops7b protein_coding nonsense_mediated_decay MGP_LPJ_T0020981.1 MGP_LPJ_G0016167.1 mouse_genomes_project 1 88980054 88985747 + Cops7b protein_coding processed_transcript MGP_LPJ_T0019101.1 MGP_LPJ_G0015815.1 mouse_genomes_project 1 32118483 32372030 - MGP_LPJ_P0019101 Prim2 protein_coding protein_coding MGP_LPJ_T0019102.1 MGP_LPJ_G0015815.1 mouse_genomes_project 1 32143826 32316876 - Prim2 protein_coding retained_intron MGP_LPJ_T0019103.1 MGP_LPJ_G0015815.1 mouse_genomes_project 1 32315614 32318066 - Prim2 protein_coding retained_intron MGP_LPJ_T0022523.1 MGP_LPJ_G0016500.1 mouse_genomes_project 1 157240839 157261039 - MGP_LPJ_P0022523 Rnf2 protein_coding protein_coding MGP_LPJ_T0022524.1 MGP_LPJ_G0016500.1 mouse_genomes_project 1 157252801 157285843 - MGP_LPJ_P0022524 Rnf2 protein_coding protein_coding MGP_LPJ_T0022525.1 MGP_LPJ_G0016500.1 mouse_genomes_project 1 157252802 157285983 - MGP_LPJ_P0022525 Rnf2 protein_coding protein_coding MGP_LPJ_T0022526.1 MGP_LPJ_G0016500.1 mouse_genomes_project 1 157254523 157285865 - MGP_LPJ_P0022526 Rnf2 protein_coding protein_coding MGP_LPJ_T0022527.1 MGP_LPJ_G0016500.1 mouse_genomes_project 1 157254555 157255436 - Rnf2 protein_coding retained_intron MGP_LPJ_T0022528.1 MGP_LPJ_G0016500.1 mouse_genomes_project 1 157254720 157258629 - Rnf2 protein_coding processed_transcript MGP_LPJ_T0022529.1 MGP_LPJ_G0016500.1 mouse_genomes_project 1 157261777 157285826 - MGP_LPJ_P0022529 Rnf2 protein_coding protein_coding MGP_LPJ_T0012295.1 MGP_LPJ_G0010386.1 mouse_genomes_project 1 162287825 162288026 - processed_pseudogene processed_pseudogene MGP_LPJ_T0022805.1 MGP_LPJ_G0016553.1 mouse_genomes_project 1 164552076 164895418 + MGP_LPJ_P0022805 Astn1 protein_coding protein_coding MGP_LPJ_T0022806.1 MGP_LPJ_G0016553.1 mouse_genomes_project 1 164552107 164895420 + MGP_LPJ_P0022806 Astn1 protein_coding protein_coding MGP_LPJ_T0022807.1 MGP_LPJ_G0016553.1 mouse_genomes_project 1 164552143 164817450 + MGP_LPJ_P0022807 Astn1 protein_coding protein_coding MGP_LPJ_T0022808.1 MGP_LPJ_G0016553.1 mouse_genomes_project 1 164552382 164816688 + MGP_LPJ_P0022808 Astn1 protein_coding protein_coding MGP_LPJ_T0022809.1 MGP_LPJ_G0016553.1 mouse_genomes_project 1 164552395 164881902 + MGP_LPJ_P0022809 Astn1 protein_coding protein_coding MGP_LPJ_T0022810.1 MGP_LPJ_G0016553.1 mouse_genomes_project 1 164716464 164727548 + Astn1 protein_coding processed_transcript MGP_LPJ_T0022811.1 MGP_LPJ_G0016553.1 mouse_genomes_project 1 164759820 164802292 + MGP_LPJ_P0022811 Astn1 protein_coding protein_coding MGP_LPJ_T0022812.1 MGP_LPJ_G0016553.1 mouse_genomes_project 1 164802042 164815858 + Astn1 protein_coding retained_intron MGP_LPJ_T0022813.1 MGP_LPJ_G0016553.1 mouse_genomes_project 1 164859442 164869833 + MGP_LPJ_P0022813 Astn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0022814.1 MGP_LPJ_G0016553.1 mouse_genomes_project 1 164859590 164886675 + MGP_LPJ_P0022814 Astn1 protein_coding protein_coding MGP_LPJ_T0022815.1 MGP_LPJ_G0016553.1 mouse_genomes_project 1 164881182 164892175 + Astn1 protein_coding processed_transcript MGP_LPJ_T0005691.1 MGP_LPJ_G0004789.1 mouse_genomes_project 1 23105138 23105790 - Gm29414 lincRNA lincRNA MGP_LPJ_T0012156.1 MGP_LPJ_G0010247.1 mouse_genomes_project 1 103790572 103791125 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009517.1 MGP_LPJ_G0007635.1 mouse_genomes_project 1 76097257 76097342 + Mir26b miRNA miRNA MGP_LPJ_T0005921.1 MGP_LPJ_G0004964.1 mouse_genomes_project 1 135473690 135497931 + Gm28856 lincRNA lincRNA MGP_LPJ_T0020122.1 MGP_LPJ_G0016004.1 mouse_genomes_project 1 64496582 64632385 + MGP_LPJ_P0020122 Adam23 protein_coding protein_coding MGP_LPJ_T0020123.1 MGP_LPJ_G0016004.1 mouse_genomes_project 1 64496586 64655621 + MGP_LPJ_P0020123 Adam23 protein_coding protein_coding MGP_LPJ_T0020124.1 MGP_LPJ_G0016004.1 mouse_genomes_project 1 64496601 64627694 + Adam23 protein_coding retained_intron MGP_LPJ_T0020125.1 MGP_LPJ_G0016004.1 mouse_genomes_project 1 64496626 64590953 + Adam23 protein_coding retained_intron MGP_LPJ_T0020126.1 MGP_LPJ_G0016004.1 mouse_genomes_project 1 64496903 64652258 + MGP_LPJ_P0020126 Adam23 protein_coding protein_coding MGP_LPJ_T0020127.1 MGP_LPJ_G0016004.1 mouse_genomes_project 1 64496903 64655621 + MGP_LPJ_P0020127 Adam23 protein_coding protein_coding MGP_LPJ_T0020128.1 MGP_LPJ_G0016004.1 mouse_genomes_project 1 64523838 64603630 + Adam23 protein_coding processed_transcript MGP_LPJ_T0020129.1 MGP_LPJ_G0016004.1 mouse_genomes_project 1 64547401 64655621 + Adam23 protein_coding processed_transcript MGP_LPJ_T0020130.1 MGP_LPJ_G0016004.1 mouse_genomes_project 1 64595080 64598604 + Adam23 protein_coding retained_intron MGP_LPJ_T0020131.1 MGP_LPJ_G0016004.1 mouse_genomes_project 1 64613073 64625510 + Adam23 protein_coding retained_intron MGP_LPJ_T0020132.1 MGP_LPJ_G0016004.1 mouse_genomes_project 1 64638136 64641524 + Adam23 protein_coding retained_intron MGP_LPJ_T0020133.1 MGP_LPJ_G0016004.1 mouse_genomes_project 1 64644363 64652152 + Adam23 protein_coding retained_intron MGP_LPJ_T0022214.1 MGP_LPJ_G0016441.1 mouse_genomes_project 1 140321969 140367722 + MGP_LPJ_P0022214 Lmod1 protein_coding protein_coding MGP_LPJ_T0023579.1 MGP_LPJ_G0016726.1 mouse_genomes_project 1 180623941 180628821 - MGP_LPJ_P0023579 Pydc4 protein_coding protein_coding MGP_LPJ_T0002782.1 MGP_LPJ_G0002647.1 mouse_genomes_project 1 13913101 13928586 + Gm28095 antisense antisense MGP_LPJ_T0011964.1 MGP_LPJ_G0010055.1 mouse_genomes_project 1 32358102 32358430 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012090.1 MGP_LPJ_G0010181.1 mouse_genomes_project 1 68888854 68890838 + processed_pseudogene processed_pseudogene MGP_LPJ_T0023603.1 MGP_LPJ_G0016745.1 mouse_genomes_project 1 181444448 181445536 - MGP_LPJ_P0023603 Olfr419 protein_coding protein_coding MGP_LPJ_T0012301.1 MGP_LPJ_G0010392.1 mouse_genomes_project 1 165402327 165402810 - processed_pseudogene processed_pseudogene MGP_LPJ_T0022785.1 MGP_LPJ_G0016549.1 mouse_genomes_project 1 163274221 163557731 - MGP_LPJ_P0022785 Rasal2 protein_coding protein_coding MGP_LPJ_T0022786.1 MGP_LPJ_G0016549.1 mouse_genomes_project 1 163279555 163557070 - MGP_LPJ_P0022786 Rasal2 protein_coding protein_coding MGP_LPJ_T0022787.1 MGP_LPJ_G0016549.1 mouse_genomes_project 1 163315934 163386409 - MGP_LPJ_P0022787 Rasal2 protein_coding protein_coding MGP_LPJ_T0022788.1 MGP_LPJ_G0016549.1 mouse_genomes_project 1 163316127 163404920 - MGP_LPJ_P0022788 Rasal2 protein_coding protein_coding MGP_LPJ_T0022789.1 MGP_LPJ_G0016549.1 mouse_genomes_project 1 163319050 163321393 - Rasal2 protein_coding processed_transcript MGP_LPJ_T0022790.1 MGP_LPJ_G0016549.1 mouse_genomes_project 1 163319050 163370960 - MGP_LPJ_P0022790 Rasal2 protein_coding protein_coding MGP_LPJ_T0022791.1 MGP_LPJ_G0016549.1 mouse_genomes_project 1 163431564 163557731 - Rasal2 protein_coding retained_intron MGP_LPJ_T0009562.1 MGP_LPJ_G0007680.1 mouse_genomes_project 1 169146511 169146574 - Gm27616 miRNA miRNA MGP_LPJ_T0002850.1 MGP_LPJ_G0002700.1 mouse_genomes_project 1 73156381 73160997 + Apol7d antisense antisense MGP_LPJ_T0002851.1 MGP_LPJ_G0002700.1 mouse_genomes_project 1 73156432 73165587 + Apol7d antisense antisense MGP_LPJ_T0002852.1 MGP_LPJ_G0002700.1 mouse_genomes_project 1 73156879 73166377 + Apol7d antisense antisense MGP_LPJ_T0002853.1 MGP_LPJ_G0002700.1 mouse_genomes_project 1 73156883 73160785 + Apol7d antisense antisense MGP_LPJ_T0101709.1 MGP_LPJ_G0039747.1 mouse_genomes_project 1 107951649 107953009 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0000708.1 MGP_LPJ_G0000641.1 mouse_genomes_project 1 153005082 153009675 + TEC TEC MGP_LPJ_T0023979.1 MGP_LPJ_G0016826.1 mouse_genomes_project 1 192665057 192700101 - MGP_LPJ_P0023979 Marc2 protein_coding protein_coding MGP_LPJ_T0023980.1 MGP_LPJ_G0016826.1 mouse_genomes_project 1 192665667 192681542 - Marc2 protein_coding processed_transcript MGP_LPJ_T0023981.1 MGP_LPJ_G0016826.1 mouse_genomes_project 1 192665671 192677134 - Marc2 protein_coding retained_intron MGP_LPJ_T0023982.1 MGP_LPJ_G0016826.1 mouse_genomes_project 1 192665681 192681327 - Marc2 protein_coding processed_transcript MGP_LPJ_T0023983.1 MGP_LPJ_G0016826.1 mouse_genomes_project 1 192665683 192671491 - Marc2 protein_coding retained_intron MGP_LPJ_T0023984.1 MGP_LPJ_G0016826.1 mouse_genomes_project 1 192665749 192681317 - Marc2 protein_coding processed_transcript MGP_LPJ_T0023985.1 MGP_LPJ_G0016826.1 mouse_genomes_project 1 192671283 192700028 - Marc2 protein_coding processed_transcript MGP_LPJ_T0023986.1 MGP_LPJ_G0016826.1 mouse_genomes_project 1 192676471 192700671 - MGP_LPJ_P0023986 Marc2 protein_coding protein_coding MGP_LPJ_T0023987.1 MGP_LPJ_G0016826.1 mouse_genomes_project 1 192681844 192699791 - Marc2 protein_coding processed_transcript MGP_LPJ_T0023988.1 MGP_LPJ_G0016826.1 mouse_genomes_project 1 192682999 192700067 - Marc2 protein_coding retained_intron MGP_LPJ_T0022549.1 MGP_LPJ_G0016505.1 mouse_genomes_project 1 158264042 158383452 + MGP_LPJ_P0022549 Colgalt2 protein_coding protein_coding MGP_LPJ_T0022550.1 MGP_LPJ_G0016505.1 mouse_genomes_project 1 158264042 158382573 + MGP_LPJ_P0022550 Colgalt2 protein_coding nonsense_mediated_decay MGP_LPJ_T0012274.1 MGP_LPJ_G0010365.1 mouse_genomes_project 1 154219833 154220623 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012256.1 MGP_LPJ_G0010347.1 mouse_genomes_project 1 144135324 144135880 - processed_pseudogene processed_pseudogene MGP_LPJ_T0019002.1 MGP_LPJ_G0015793.1 mouse_genomes_project 1 19281096 19283450 + MGP_LPJ_P0019002 protein_coding protein_coding MGP_LPJ_T0023589.1 MGP_LPJ_G0016734.1 mouse_genomes_project 1 181094907 181163045 - MGP_LPJ_P0023589 protein_coding protein_coding MGP_LPJ_T0023591.1 MGP_LPJ_G0016734.1 mouse_genomes_project 1 181155769 181163100 - protein_coding retained_intron MGP_LPJ_T0021560.1 MGP_LPJ_G0016297.1 mouse_genomes_project 1 110658670 110665847 - MGP_LPJ_P0021560 Serpinb3b protein_coding protein_coding MGP_LPJ_T0021561.1 MGP_LPJ_G0016297.1 mouse_genomes_project 1 110658691 110784219 - MGP_LPJ_P0021561 Serpinb3b protein_coding protein_coding MGP_LPJ_T0000584.1 MGP_LPJ_G0000519.1 mouse_genomes_project 1 89200391 89203343 + TEC TEC MGP_LPJ_T0000625.1 MGP_LPJ_G0000560.1 mouse_genomes_project 1 123896323 123904486 - TEC TEC MGP_LPJ_T0000806.1 MGP_LPJ_G0000738.1 mouse_genomes_project 1 189783806 189787675 - TEC TEC MGP_LPJ_T0024239.1 MGP_LPJ_G0016876.1 mouse_genomes_project 1 201441565 201468225 - MGP_LPJ_P0024239 Traf3ip3 protein_coding protein_coding MGP_LPJ_T0024240.1 MGP_LPJ_G0016876.1 mouse_genomes_project 1 201441606 201468438 - MGP_LPJ_P0024240 Traf3ip3 protein_coding nonsense_mediated_decay MGP_LPJ_T0024241.1 MGP_LPJ_G0016876.1 mouse_genomes_project 1 201441616 201468438 - MGP_LPJ_P0024241 Traf3ip3 protein_coding protein_coding MGP_LPJ_T0024242.1 MGP_LPJ_G0016876.1 mouse_genomes_project 1 201445347 201450929 - MGP_LPJ_P0024242 Traf3ip3 protein_coding protein_coding MGP_LPJ_T0024243.1 MGP_LPJ_G0016876.1 mouse_genomes_project 1 201445351 201463923 - Traf3ip3 protein_coding retained_intron MGP_LPJ_T0024244.1 MGP_LPJ_G0016876.1 mouse_genomes_project 1 201450684 201460411 - MGP_LPJ_P0024244 Traf3ip3 protein_coding protein_coding MGP_LPJ_T0024245.1 MGP_LPJ_G0016876.1 mouse_genomes_project 1 201450773 201453251 - MGP_LPJ_P0024245 Traf3ip3 protein_coding protein_coding MGP_LPJ_T0024246.1 MGP_LPJ_G0016876.1 mouse_genomes_project 1 201451300 201468346 - Traf3ip3 protein_coding retained_intron MGP_LPJ_T0024247.1 MGP_LPJ_G0016876.1 mouse_genomes_project 1 201460476 201468407 - Traf3ip3 protein_coding retained_intron MGP_LPJ_T0024248.1 MGP_LPJ_G0016876.1 mouse_genomes_project 1 201460629 201464072 - MGP_LPJ_P0024248 Traf3ip3 protein_coding protein_coding MGP_LPJ_T0024249.1 MGP_LPJ_G0016876.1 mouse_genomes_project 1 201464128 201468389 - Traf3ip3 protein_coding processed_transcript MGP_LPJ_T0024250.1 MGP_LPJ_G0016876.1 mouse_genomes_project 1 201464135 201468393 - Traf3ip3 protein_coding processed_transcript MGP_LPJ_T0024251.1 MGP_LPJ_G0016876.1 mouse_genomes_project 1 201467786 201468594 - Traf3ip3 protein_coding processed_transcript MGP_LPJ_T0011999.1 MGP_LPJ_G0010090.1 mouse_genomes_project 1 44017079 44017499 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000471.1 MGP_LPJ_G0000406.1 mouse_genomes_project 1 32374078 32376379 - TEC TEC MGP_LPJ_T0000417.1 MGP_LPJ_G0000355.1 mouse_genomes_project 1 10855163 10857031 - TEC TEC MGP_LPJ_T0002929.1 MGP_LPJ_G0002758.1 mouse_genomes_project 1 151853173 151923368 - Gm29514 antisense antisense MGP_LPJ_T0002930.1 MGP_LPJ_G0002758.1 mouse_genomes_project 1 151861204 151923477 - Gm29514 antisense antisense MGP_LPJ_T0019717.1 MGP_LPJ_G0015930.1 mouse_genomes_project 1 53148404 53263290 - MGP_LPJ_P0019717 Pms1 protein_coding protein_coding MGP_LPJ_T0019718.1 MGP_LPJ_G0015930.1 mouse_genomes_project 1 53156298 53263289 - MGP_LPJ_P0019718 Pms1 protein_coding protein_coding MGP_LPJ_T0019719.1 MGP_LPJ_G0015930.1 mouse_genomes_project 1 53238672 53263247 - MGP_LPJ_P0019719 Pms1 protein_coding protein_coding MGP_LPJ_T0019720.1 MGP_LPJ_G0015930.1 mouse_genomes_project 1 53245635 53252458 - MGP_LPJ_P0019720 Pms1 protein_coding protein_coding MGP_LPJ_T0019721.1 MGP_LPJ_G0015930.1 mouse_genomes_project 1 53245657 53263287 - MGP_LPJ_P0019721 Pms1 protein_coding protein_coding MGP_LPJ_T0019722.1 MGP_LPJ_G0015930.1 mouse_genomes_project 1 53251996 53263287 - MGP_LPJ_P0019722 Pms1 protein_coding protein_coding MGP_LPJ_T0019723.1 MGP_LPJ_G0015930.1 mouse_genomes_project 1 53261564 53263287 - Pms1 protein_coding retained_intron MGP_LPJ_T0023419.1 MGP_LPJ_G0016681.1 mouse_genomes_project 1 178407134 178408406 + MGP_LPJ_P0023419 Alyref2 protein_coding protein_coding MGP_LPJ_T0000754.1 MGP_LPJ_G0000687.1 mouse_genomes_project 1 167245760 167249329 + TEC TEC MGP_LPJ_T0018974.1 MGP_LPJ_G0015784.1 mouse_genomes_project 1 17901934 18461940 - MGP_LPJ_P0018974 Pkhd1 protein_coding protein_coding MGP_LPJ_T0018975.1 MGP_LPJ_G0015784.1 mouse_genomes_project 1 18049793 18459173 - MGP_LPJ_P0018975 Pkhd1 protein_coding unknown_likely_coding MGP_LPJ_T0018976.1 MGP_LPJ_G0015784.1 mouse_genomes_project 1 18219917 18258086 - Pkhd1 protein_coding processed_transcript MGP_LPJ_T0018977.1 MGP_LPJ_G0015784.1 mouse_genomes_project 1 18432943 18461940 - Pkhd1 protein_coding retained_intron MGP_LPJ_T0018978.1 MGP_LPJ_G0015784.1 mouse_genomes_project 1 18450286 18461916 - Pkhd1 protein_coding processed_transcript MGP_LPJ_T0024227.1 MGP_LPJ_G0016874.1 mouse_genomes_project 1 201419223 201438136 + MGP_LPJ_P0024227 Irf6 protein_coding protein_coding MGP_LPJ_T0024228.1 MGP_LPJ_G0016874.1 mouse_genomes_project 1 201419266 201432981 + Irf6 protein_coding retained_intron MGP_LPJ_T0024229.1 MGP_LPJ_G0016874.1 mouse_genomes_project 1 201422781 201430294 + Irf6 protein_coding retained_intron MGP_LPJ_T0024231.1 MGP_LPJ_G0016874.1 mouse_genomes_project 1 201434615 201435602 + Irf6 protein_coding retained_intron MGP_LPJ_T0012152.1 MGP_LPJ_G0010243.1 mouse_genomes_project 1 102764325 102766171 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000814.1 MGP_LPJ_G0000745.1 mouse_genomes_project 1 193203908 193210389 + TEC TEC MGP_LPJ_T0024066.1 MGP_LPJ_G0016843.1 mouse_genomes_project 1 197278497 197421637 - MGP_LPJ_P0024066 Kcnk2 protein_coding protein_coding MGP_LPJ_T0024067.1 MGP_LPJ_G0016843.1 mouse_genomes_project 1 197278504 197478755 - MGP_LPJ_P0024067 Kcnk2 protein_coding nonsense_mediated_decay MGP_LPJ_T0024068.1 MGP_LPJ_G0016843.1 mouse_genomes_project 1 197278504 197421277 - MGP_LPJ_P0024068 Kcnk2 protein_coding protein_coding MGP_LPJ_T0024069.1 MGP_LPJ_G0016843.1 mouse_genomes_project 1 197280311 197478700 - MGP_LPJ_P0024069 Kcnk2 protein_coding protein_coding MGP_LPJ_T0024070.1 MGP_LPJ_G0016843.1 mouse_genomes_project 1 197280320 197478695 - MGP_LPJ_P0024070 Kcnk2 protein_coding protein_coding MGP_LPJ_T0024071.1 MGP_LPJ_G0016843.1 mouse_genomes_project 1 197280357 197420800 - MGP_LPJ_P0024071 Kcnk2 protein_coding protein_coding MGP_LPJ_T0024072.1 MGP_LPJ_G0016843.1 mouse_genomes_project 1 197280357 197421152 - MGP_LPJ_P0024072 Kcnk2 protein_coding protein_coding MGP_LPJ_T0024073.1 MGP_LPJ_G0016843.1 mouse_genomes_project 1 197280592 197285734 - Kcnk2 protein_coding processed_transcript MGP_LPJ_T0024074.1 MGP_LPJ_G0016843.1 mouse_genomes_project 1 197280629 197313896 - Kcnk2 protein_coding processed_transcript MGP_LPJ_T0024075.1 MGP_LPJ_G0016843.1 mouse_genomes_project 1 197417325 197424424 - Kcnk2 protein_coding processed_transcript MGP_LPJ_T0011990.1 MGP_LPJ_G0010081.1 mouse_genomes_project 1 42588177 42588630 + processed_pseudogene processed_pseudogene MGP_LPJ_T0023822.1 MGP_LPJ_G0016790.1 mouse_genomes_project 1 188518848 188535965 - MGP_LPJ_P0023822 H3f3a protein_coding protein_coding MGP_LPJ_T0023823.1 MGP_LPJ_G0016790.1 mouse_genomes_project 1 188524587 188535867 - MGP_LPJ_P0023823 H3f3a protein_coding protein_coding MGP_LPJ_T0023824.1 MGP_LPJ_G0016790.1 mouse_genomes_project 1 188524587 188536264 - MGP_LPJ_P0023824 H3f3a protein_coding protein_coding MGP_LPJ_T0023825.1 MGP_LPJ_G0016790.1 mouse_genomes_project 1 188532134 188535936 - H3f3a protein_coding retained_intron MGP_LPJ_T0023826.1 MGP_LPJ_G0016790.1 mouse_genomes_project 1 188532570 188535936 - MGP_LPJ_P0023826 H3f3a protein_coding protein_coding MGP_LPJ_T0023827.1 MGP_LPJ_G0016790.1 mouse_genomes_project 1 188532578 188535936 - MGP_LPJ_P0023827 H3f3a protein_coding protein_coding MGP_LPJ_T0012019.1 MGP_LPJ_G0010110.1 mouse_genomes_project 1 48568275 48569206 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101701.1 MGP_LPJ_G0039739.1 mouse_genomes_project 1 95351707 95351890 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0022160.1 MGP_LPJ_G0016428.1 mouse_genomes_project 1 139437894 139452043 + MGP_LPJ_P0022160 Rabif protein_coding protein_coding MGP_LPJ_T0022886.1 MGP_LPJ_G0016565.1 mouse_genomes_project 1 167381186 167412470 - MGP_LPJ_P0022886 Dars2 protein_coding protein_coding MGP_LPJ_T0022887.1 MGP_LPJ_G0016565.1 mouse_genomes_project 1 167381767 167412454 - Dars2 protein_coding retained_intron MGP_LPJ_T0022888.1 MGP_LPJ_G0016565.1 mouse_genomes_project 1 167382076 167387543 - Dars2 protein_coding processed_transcript MGP_LPJ_T0022889.1 MGP_LPJ_G0016565.1 mouse_genomes_project 1 167382082 167412468 - Dars2 protein_coding retained_intron MGP_LPJ_T0022890.1 MGP_LPJ_G0016565.1 mouse_genomes_project 1 167385583 167412419 - Dars2 protein_coding retained_intron MGP_LPJ_T0022891.1 MGP_LPJ_G0016565.1 mouse_genomes_project 1 167404422 167405453 - Dars2 protein_coding retained_intron MGP_LPJ_T0022892.1 MGP_LPJ_G0016565.1 mouse_genomes_project 1 167404781 167412442 - Dars2 protein_coding processed_transcript MGP_LPJ_T0097962.1 MGP_LPJ_G0036243.1 mouse_genomes_project 1 33487784 33488733 + pseudogene pseudogene MGP_LPJ_T0012028.1 MGP_LPJ_G0010119.1 mouse_genomes_project 1 50443848 50444010 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021535.1 MGP_LPJ_G0016289.1 mouse_genomes_project 1 109573807 109802551 + MGP_LPJ_P0021535 Phlpp1 protein_coding protein_coding MGP_LPJ_T0021536.1 MGP_LPJ_G0016289.1 mouse_genomes_project 1 109686169 109692273 + Phlpp1 protein_coding retained_intron MGP_LPJ_T0021537.1 MGP_LPJ_G0016289.1 mouse_genomes_project 1 109716855 109718657 + Phlpp1 protein_coding processed_transcript MGP_LPJ_T0012228.1 MGP_LPJ_G0010319.1 mouse_genomes_project 1 128133778 128134663 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002940.1 MGP_LPJ_G0002766.1 mouse_genomes_project 1 161295237 161297135 + Gm37622 antisense antisense MGP_LPJ_T0101233.1 MGP_LPJ_G0039486.1 mouse_genomes_project 1 179413431 179428995 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101234.1 MGP_LPJ_G0039486.1 mouse_genomes_project 1 179428059 179428913 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0011954.1 MGP_LPJ_G0010045.1 mouse_genomes_project 1 29781144 29781703 + processed_pseudogene processed_pseudogene MGP_LPJ_T0019434.1 MGP_LPJ_G0015874.1 mouse_genomes_project 1 38708788 38744848 - MGP_LPJ_P0019434 Creg2 protein_coding protein_coding MGP_LPJ_T0002971.1 MGP_LPJ_G0002791.1 mouse_genomes_project 1 178403855 178407768 - B930036N10Rik antisense antisense MGP_LPJ_T0002972.1 MGP_LPJ_G0002791.1 mouse_genomes_project 1 178406465 178407768 - B930036N10Rik antisense antisense MGP_LPJ_T0005925.1 MGP_LPJ_G0004968.1 mouse_genomes_project 1 137128090 137135385 + F730311O21Rik lincRNA lincRNA MGP_LPJ_T0002878.1 MGP_LPJ_G0002720.1 mouse_genomes_project 1 95349467 95349843 - 1700054K02Rik antisense antisense MGP_LPJ_T0098086.1 MGP_LPJ_G0036367.1 mouse_genomes_project 1 87984355 87984459 + n-R5s215 rRNA rRNA MGP_LPJ_T0016911.1 MGP_LPJ_G0015002.1 mouse_genomes_project 1 1709359 1712187 + Gm37587 processed_transcript retained_intron MGP_LPJ_T0016912.1 MGP_LPJ_G0015002.1 mouse_genomes_project 1 1710282 1712367 + Gm37587 processed_transcript antisense MGP_LPJ_T0012061.1 MGP_LPJ_G0010152.1 mouse_genomes_project 1 61761380 61762207 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021530.1 MGP_LPJ_G0016288.1 mouse_genomes_project 1 109388664 109432322 + MGP_LPJ_P0021530 Zcchc2 protein_coding protein_coding MGP_LPJ_T0021531.1 MGP_LPJ_G0016288.1 mouse_genomes_project 1 109388947 109432315 + MGP_LPJ_P0021531 Zcchc2 protein_coding protein_coding MGP_LPJ_T0021532.1 MGP_LPJ_G0016288.1 mouse_genomes_project 1 109402380 109430696 + MGP_LPJ_P0021532 Zcchc2 protein_coding protein_coding MGP_LPJ_T0021533.1 MGP_LPJ_G0016288.1 mouse_genomes_project 1 109402395 109425749 + MGP_LPJ_P0021533 Zcchc2 protein_coding protein_coding MGP_LPJ_T0021534.1 MGP_LPJ_G0016288.1 mouse_genomes_project 1 109410002 109421517 + MGP_LPJ_P0021534 Zcchc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0016992.1 MGP_LPJ_G0015033.1 mouse_genomes_project 1 165886005 165960214 + Gm10530 processed_transcript sense_intronic MGP_LPJ_T0016993.1 MGP_LPJ_G0015033.1 mouse_genomes_project 1 165956999 165960214 + Gm10530 processed_transcript lincRNA MGP_LPJ_T0000413.1 MGP_LPJ_G0000351.1 mouse_genomes_project 1 10607999 10608550 - TEC TEC MGP_LPJ_T0021307.1 MGP_LPJ_G0016243.1 mouse_genomes_project 1 95648651 95689815 - MGP_LPJ_P0021307 Ankmy1 protein_coding unknown_likely_coding MGP_LPJ_T0021308.1 MGP_LPJ_G0016243.1 mouse_genomes_project 1 95657655 95690138 - MGP_LPJ_P0021308 Ankmy1 protein_coding protein_coding MGP_LPJ_T0021309.1 MGP_LPJ_G0016243.1 mouse_genomes_project 1 95657655 95690138 - MGP_LPJ_P0021309 Ankmy1 protein_coding protein_coding MGP_LPJ_T0012242.1 MGP_LPJ_G0010333.1 mouse_genomes_project 1 138403919 138404711 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012076.1 MGP_LPJ_G0010167.1 mouse_genomes_project 1 64896576 64897328 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011889.1 MGP_LPJ_G0009980.1 mouse_genomes_project 1 6184023 6184221 + processed_pseudogene processed_pseudogene MGP_LPJ_T0023963.1 MGP_LPJ_G0016820.1 mouse_genomes_project 1 191228411 191253289 + MGP_LPJ_P0023963 Taf1a protein_coding protein_coding MGP_LPJ_T0023964.1 MGP_LPJ_G0016820.1 mouse_genomes_project 1 191228415 191249243 + MGP_LPJ_P0023964 Taf1a protein_coding protein_coding MGP_LPJ_T0023965.1 MGP_LPJ_G0016820.1 mouse_genomes_project 1 191228491 191254116 + MGP_LPJ_P0023965 Taf1a protein_coding unknown_likely_coding MGP_LPJ_T0023966.1 MGP_LPJ_G0016820.1 mouse_genomes_project 1 191252514 191254117 + MGP_LPJ_P0023966 Taf1a protein_coding protein_coding MGP_LPJ_T0020982.1 MGP_LPJ_G0016168.1 mouse_genomes_project 1 89057909 89062190 - MGP_LPJ_P0020982 Nppc protein_coding protein_coding MGP_LPJ_T0000508.1 MGP_LPJ_G0000443.1 mouse_genomes_project 1 55261299 55262709 - TEC TEC MGP_LPJ_T0098458.1 MGP_LPJ_G0036738.1 mouse_genomes_project 1 149149183 149152849 + Gm29170 sense_intronic sense_intronic MGP_LPJ_T0023202.1 MGP_LPJ_G0016633.1 mouse_genomes_project 1 174250115 174291556 + MGP_LPJ_P0023202 Rxrg protein_coding protein_coding MGP_LPJ_T0005785.1 MGP_LPJ_G0004855.1 mouse_genomes_project 1 65030691 65034959 + Gm13749 lincRNA lincRNA MGP_LPJ_T0002870.1 MGP_LPJ_G0002712.1 mouse_genomes_project 1 88626721 88658123 - Gm16341 antisense antisense MGP_LPJ_T0020643.1 MGP_LPJ_G0016101.1 mouse_genomes_project 1 77069059 77130656 + MGP_LPJ_P0020643 Speg protein_coding protein_coding MGP_LPJ_T0020644.1 MGP_LPJ_G0016101.1 mouse_genomes_project 1 77075865 77100478 + MGP_LPJ_P0020644 Speg protein_coding protein_coding MGP_LPJ_T0020645.1 MGP_LPJ_G0016101.1 mouse_genomes_project 1 77075865 77082071 + MGP_LPJ_P0020645 Speg protein_coding protein_coding MGP_LPJ_T0020646.1 MGP_LPJ_G0016101.1 mouse_genomes_project 1 77075877 77077137 + Speg protein_coding retained_intron MGP_LPJ_T0020647.1 MGP_LPJ_G0016101.1 mouse_genomes_project 1 77075889 77081621 + MGP_LPJ_P0020647 Speg protein_coding nonsense_mediated_decay MGP_LPJ_T0020648.1 MGP_LPJ_G0016101.1 mouse_genomes_project 1 77077310 77078703 + Speg protein_coding processed_transcript MGP_LPJ_T0020649.1 MGP_LPJ_G0016101.1 mouse_genomes_project 1 77078427 77081674 + Speg protein_coding retained_intron MGP_LPJ_T0020650.1 MGP_LPJ_G0016101.1 mouse_genomes_project 1 77078555 77087838 + MGP_LPJ_P0020650 Speg protein_coding nonsense_mediated_decay MGP_LPJ_T0020651.1 MGP_LPJ_G0016101.1 mouse_genomes_project 1 77079238 77082830 + Speg protein_coding processed_transcript MGP_LPJ_T0020652.1 MGP_LPJ_G0016101.1 mouse_genomes_project 1 77079336 77130641 + MGP_LPJ_P0020652 Speg protein_coding protein_coding MGP_LPJ_T0020653.1 MGP_LPJ_G0016101.1 mouse_genomes_project 1 77096017 77099905 + MGP_LPJ_P0020653 Speg protein_coding protein_coding MGP_LPJ_T0020654.1 MGP_LPJ_G0016101.1 mouse_genomes_project 1 77096453 77100285 + MGP_LPJ_P0020654 Speg protein_coding protein_coding MGP_LPJ_T0020655.1 MGP_LPJ_G0016101.1 mouse_genomes_project 1 77096567 77100477 + MGP_LPJ_P0020655 Speg protein_coding protein_coding MGP_LPJ_T0020656.1 MGP_LPJ_G0016101.1 mouse_genomes_project 1 77096942 77100122 + MGP_LPJ_P0020656 Speg protein_coding protein_coding MGP_LPJ_T0020657.1 MGP_LPJ_G0016101.1 mouse_genomes_project 1 77119447 77125956 + Speg protein_coding retained_intron MGP_LPJ_T0021137.1 MGP_LPJ_G0016203.1 mouse_genomes_project 1 91065565 91075788 - MGP_LPJ_P0021137 Glrp1 protein_coding protein_coding MGP_LPJ_T0000428.1 MGP_LPJ_G0000366.1 mouse_genomes_project 1 14337791 14340771 + TEC TEC MGP_LPJ_T0019501.1 MGP_LPJ_G0015890.1 mouse_genomes_project 1 42259513 42261797 + Gpr45 protein_coding processed_transcript MGP_LPJ_T0019502.1 MGP_LPJ_G0015890.1 mouse_genomes_project 1 42259604 42347895 + MGP_LPJ_P0019502 Gpr45 protein_coding protein_coding MGP_LPJ_T0019503.1 MGP_LPJ_G0015890.1 mouse_genomes_project 1 42259780 42340657 + Gpr45 protein_coding processed_transcript MGP_LPJ_T0019504.1 MGP_LPJ_G0015890.1 mouse_genomes_project 1 42259823 42260520 + Gpr45 protein_coding processed_transcript MGP_LPJ_T0019505.1 MGP_LPJ_G0015890.1 mouse_genomes_project 1 42344500 42346046 + MGP_LPJ_P0019505 Gpr45 protein_coding protein_coding MGP_LPJ_T0022290.1 MGP_LPJ_G0016455.1 mouse_genomes_project 1 141161153 141211554 + MGP_LPJ_P0022290 Kif21b protein_coding protein_coding MGP_LPJ_T0022291.1 MGP_LPJ_G0016455.1 mouse_genomes_project 1 141161218 141179745 + Kif21b protein_coding retained_intron MGP_LPJ_T0022292.1 MGP_LPJ_G0016455.1 mouse_genomes_project 1 141161486 141207127 + MGP_LPJ_P0022292 Kif21b protein_coding unknown_likely_coding MGP_LPJ_T0022293.1 MGP_LPJ_G0016455.1 mouse_genomes_project 1 141193921 141198608 + MGP_LPJ_P0022293 Kif21b protein_coding nonsense_mediated_decay MGP_LPJ_T0022294.1 MGP_LPJ_G0016455.1 mouse_genomes_project 1 141196512 141198394 + Kif21b protein_coding retained_intron MGP_LPJ_T0022295.1 MGP_LPJ_G0016455.1 mouse_genomes_project 1 141202869 141205855 + Kif21b protein_coding processed_transcript MGP_LPJ_T0019057.1 MGP_LPJ_G0015806.1 mouse_genomes_project 1 23147452 23314289 - MGP_LPJ_P0019057 Adgrb3 protein_coding protein_coding MGP_LPJ_T0019058.1 MGP_LPJ_G0015806.1 mouse_genomes_project 1 23147526 23940574 - MGP_LPJ_P0019058 Adgrb3 protein_coding protein_coding MGP_LPJ_T0019059.1 MGP_LPJ_G0015806.1 mouse_genomes_project 1 23147526 23943951 - MGP_LPJ_P0019059 Adgrb3 protein_coding protein_coding MGP_LPJ_T0019060.1 MGP_LPJ_G0015806.1 mouse_genomes_project 1 23147526 23944170 - MGP_LPJ_P0019060 Adgrb3 protein_coding protein_coding MGP_LPJ_T0019061.1 MGP_LPJ_G0015806.1 mouse_genomes_project 1 23147654 23941195 - MGP_LPJ_P0019061 Adgrb3 protein_coding protein_coding MGP_LPJ_T0019062.1 MGP_LPJ_G0015806.1 mouse_genomes_project 1 23147667 23314563 - Adgrb3 protein_coding retained_intron MGP_LPJ_T0019063.1 MGP_LPJ_G0015806.1 mouse_genomes_project 1 23172103 23314509 - Adgrb3 protein_coding retained_intron MGP_LPJ_T0019064.1 MGP_LPJ_G0015806.1 mouse_genomes_project 1 23210399 23288916 - Adgrb3 protein_coding processed_transcript MGP_LPJ_T0019065.1 MGP_LPJ_G0015806.1 mouse_genomes_project 1 23285907 23289886 - Adgrb3 protein_coding retained_intron MGP_LPJ_T0019066.1 MGP_LPJ_G0015806.1 mouse_genomes_project 1 23303186 23314290 - Adgrb3 protein_coding retained_intron MGP_LPJ_T0019067.1 MGP_LPJ_G0015806.1 mouse_genomes_project 1 23590983 23940782 - Adgrb3 protein_coding retained_intron MGP_LPJ_T0101686.1 MGP_LPJ_G0039724.1 mouse_genomes_project 1 66543149 66543829 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0019594.1 MGP_LPJ_G0015908.1 mouse_genomes_project 1 45172610 45201112 + MGP_LPJ_P0019594 Wdr75 protein_coding protein_coding MGP_LPJ_T0019595.1 MGP_LPJ_G0015908.1 mouse_genomes_project 1 45172893 45201097 + Wdr75 protein_coding retained_intron MGP_LPJ_T0019596.1 MGP_LPJ_G0015908.1 mouse_genomes_project 1 45172947 45180020 + Wdr75 protein_coding retained_intron MGP_LPJ_T0019597.1 MGP_LPJ_G0015908.1 mouse_genomes_project 1 45172951 45181593 + MGP_LPJ_P0019597 Wdr75 protein_coding protein_coding MGP_LPJ_T0019598.1 MGP_LPJ_G0015908.1 mouse_genomes_project 1 45179652 45201008 + Wdr75 protein_coding processed_transcript MGP_LPJ_T0019599.1 MGP_LPJ_G0015908.1 mouse_genomes_project 1 45181350 45183120 + Wdr75 protein_coding processed_transcript MGP_LPJ_T0019600.1 MGP_LPJ_G0015908.1 mouse_genomes_project 1 45192176 45201112 + Wdr75 protein_coding retained_intron MGP_LPJ_T0019601.1 MGP_LPJ_G0015908.1 mouse_genomes_project 1 45199761 45201006 + Wdr75 protein_coding retained_intron MGP_LPJ_T0019602.1 MGP_LPJ_G0015908.1 mouse_genomes_project 1 45200053 45201109 + MGP_LPJ_P0019602 Wdr75 protein_coding protein_coding MGP_LPJ_T0020525.1 MGP_LPJ_G0016087.1 mouse_genomes_project 1 76827523 76832656 + MGP_LPJ_P0020525 Fam134a protein_coding nonsense_mediated_decay MGP_LPJ_T0020526.1 MGP_LPJ_G0016087.1 mouse_genomes_project 1 76827531 76832660 + MGP_LPJ_P0020526 Fam134a protein_coding protein_coding MGP_LPJ_T0020527.1 MGP_LPJ_G0016087.1 mouse_genomes_project 1 76827539 76832656 + MGP_LPJ_P0020527 Fam134a protein_coding protein_coding MGP_LPJ_T0020528.1 MGP_LPJ_G0016087.1 mouse_genomes_project 1 76827725 76829411 + MGP_LPJ_P0020528 Fam134a protein_coding protein_coding MGP_LPJ_T0020529.1 MGP_LPJ_G0016087.1 mouse_genomes_project 1 76827910 76832654 + MGP_LPJ_P0020529 Fam134a protein_coding protein_coding MGP_LPJ_T0020530.1 MGP_LPJ_G0016087.1 mouse_genomes_project 1 76827927 76829124 + MGP_LPJ_P0020530 Fam134a protein_coding protein_coding MGP_LPJ_T0020531.1 MGP_LPJ_G0016087.1 mouse_genomes_project 1 76828123 76828856 + Fam134a protein_coding retained_intron MGP_LPJ_T0020532.1 MGP_LPJ_G0016087.1 mouse_genomes_project 1 76830050 76830508 + MGP_LPJ_P0020532 Fam134a protein_coding protein_coding MGP_LPJ_T0018753.1 MGP_LPJ_G0015742.1 mouse_genomes_project 1 7124490 7157184 - MGP_LPJ_P0018753 Mybl1 protein_coding protein_coding MGP_LPJ_T0018754.1 MGP_LPJ_G0015742.1 mouse_genomes_project 1 7126606 7156999 - MGP_LPJ_P0018754 Mybl1 protein_coding protein_coding MGP_LPJ_T0018755.1 MGP_LPJ_G0015742.1 mouse_genomes_project 1 7133195 7135682 - Mybl1 protein_coding retained_intron MGP_LPJ_T0018756.1 MGP_LPJ_G0015742.1 mouse_genomes_project 1 7135343 7140535 - Mybl1 protein_coding retained_intron MGP_LPJ_T0018757.1 MGP_LPJ_G0015742.1 mouse_genomes_project 1 7138934 7156629 - MGP_LPJ_P0018757 Mybl1 protein_coding protein_coding MGP_LPJ_T0012234.1 MGP_LPJ_G0010325.1 mouse_genomes_project 1 133111953 133112260 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012231.1 MGP_LPJ_G0010322.1 mouse_genomes_project 1 131568674 131569392 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005718.1 MGP_LPJ_G0004812.1 mouse_genomes_project 1 41000015 41165903 + Gm29260 lincRNA lincRNA MGP_LPJ_T0005719.1 MGP_LPJ_G0004812.1 mouse_genomes_project 1 41144290 41146028 + Gm29260 lincRNA lincRNA MGP_LPJ_T0000519.1 MGP_LPJ_G0000454.1 mouse_genomes_project 1 60839339 60844746 + TEC TEC MGP_LPJ_T0000443.1 MGP_LPJ_G0000379.1 mouse_genomes_project 1 23412451 23415930 - TEC TEC MGP_LPJ_T0098801.1 MGP_LPJ_G0037064.1 mouse_genomes_project 1 178648914 178648969 - Gm26412 snRNA snRNA MGP_LPJ_T0101684.1 MGP_LPJ_G0039722.1 mouse_genomes_project 1 64206656 64207030 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0020593.1 MGP_LPJ_G0016094.1 mouse_genomes_project 1 76902630 76907697 - MGP_LPJ_P0020593 Tuba4a protein_coding protein_coding MGP_LPJ_T0020594.1 MGP_LPJ_G0016094.1 mouse_genomes_project 1 76903374 76907027 - MGP_LPJ_P0020594 Tuba4a protein_coding protein_coding MGP_LPJ_T0020595.1 MGP_LPJ_G0016094.1 mouse_genomes_project 1 76904014 76905837 - MGP_LPJ_P0020595 Tuba4a protein_coding protein_coding MGP_LPJ_T0020596.1 MGP_LPJ_G0016094.1 mouse_genomes_project 1 76904358 76905817 - MGP_LPJ_P0020596 Tuba4a protein_coding protein_coding MGP_LPJ_T0020597.1 MGP_LPJ_G0016094.1 mouse_genomes_project 1 76904837 76907646 - Tuba4a protein_coding retained_intron MGP_LPJ_T0020598.1 MGP_LPJ_G0016094.1 mouse_genomes_project 1 76905259 76908268 - MGP_LPJ_P0020598 Tuba4a protein_coding protein_coding MGP_LPJ_T0020599.1 MGP_LPJ_G0016094.1 mouse_genomes_project 1 76905291 76907291 - MGP_LPJ_P0020599 Tuba4a protein_coding protein_coding MGP_LPJ_T0020600.1 MGP_LPJ_G0016094.1 mouse_genomes_project 1 76905315 76907291 - MGP_LPJ_P0020600 Tuba4a protein_coding protein_coding MGP_LPJ_T0101692.1 MGP_LPJ_G0039730.1 mouse_genomes_project 1 90455464 90457283 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0005791.1 MGP_LPJ_G0004861.1 mouse_genomes_project 1 69087497 69103186 + Gm15669 lincRNA lincRNA MGP_LPJ_T0098756.1 MGP_LPJ_G0037019.1 mouse_genomes_project 1 73790472 73790663 + Gm23472 snRNA snRNA MGP_LPJ_T0023553.1 MGP_LPJ_G0016715.1 mouse_genomes_project 1 180077880 180078917 - MGP_LPJ_P0023553 Olfr1408 protein_coding protein_coding MGP_LPJ_T0023554.1 MGP_LPJ_G0016715.1 mouse_genomes_project 1 180077880 180085517 - MGP_LPJ_P0023554 Olfr1408 protein_coding protein_coding MGP_LPJ_T0005936.1 MGP_LPJ_G0004979.1 mouse_genomes_project 1 141657641 141660077 - 4933409D19Rik lincRNA lincRNA MGP_LPJ_T0023972.1 MGP_LPJ_G0016823.1 mouse_genomes_project 1 191833274 191834546 - 1700056E22Rik protein_coding antisense MGP_LPJ_T0023973.1 MGP_LPJ_G0016823.1 mouse_genomes_project 1 191833276 191834243 - MGP_LPJ_P0023973 1700056E22Rik protein_coding protein_coding MGP_LPJ_T0012068.1 MGP_LPJ_G0010159.1 mouse_genomes_project 1 63073275 63073534 - processed_pseudogene processed_pseudogene MGP_LPJ_T0022393.1 MGP_LPJ_G0016477.1 mouse_genomes_project 1 145366386 145474412 - MGP_LPJ_P0022393 Cfh protein_coding protein_coding MGP_LPJ_T0022394.1 MGP_LPJ_G0016477.1 mouse_genomes_project 1 145367714 145474354 - MGP_LPJ_P0022394 Cfh protein_coding unknown_likely_coding MGP_LPJ_T0022395.1 MGP_LPJ_G0016477.1 mouse_genomes_project 1 145474265 145474896 - Cfh protein_coding retained_intron MGP_LPJ_T0020143.1 MGP_LPJ_G0016008.1 mouse_genomes_project 1 64818378 64835012 - MGP_LPJ_P0020143 4933402D24Rik protein_coding protein_coding MGP_LPJ_T0012306.1 MGP_LPJ_G0010397.1 mouse_genomes_project 1 168152096 168153686 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012057.1 MGP_LPJ_G0010148.1 mouse_genomes_project 1 61489328 61489745 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000670.1 MGP_LPJ_G0000604.1 mouse_genomes_project 1 138722978 138724676 + TEC TEC MGP_LPJ_T0021984.1 MGP_LPJ_G0016390.1 mouse_genomes_project 1 137141967 137178557 - MGP_LPJ_P0021984 Tmcc2 protein_coding protein_coding MGP_LPJ_T0021985.1 MGP_LPJ_G0016390.1 mouse_genomes_project 1 137141968 137154907 - Tmcc2 protein_coding retained_intron MGP_LPJ_T0021986.1 MGP_LPJ_G0016390.1 mouse_genomes_project 1 137141968 137154908 - MGP_LPJ_P0021986 Tmcc2 protein_coding protein_coding MGP_LPJ_T0021987.1 MGP_LPJ_G0016390.1 mouse_genomes_project 1 137146249 137154093 - Tmcc2 protein_coding processed_transcript MGP_LPJ_T0021988.1 MGP_LPJ_G0016390.1 mouse_genomes_project 1 137146676 137150599 - Tmcc2 protein_coding processed_transcript MGP_LPJ_T0000765.1 MGP_LPJ_G0000698.1 mouse_genomes_project 1 172011286 172012320 + TEC TEC MGP_LPJ_T0012034.1 MGP_LPJ_G0010125.1 mouse_genomes_project 1 52516737 52517199 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002833.1 MGP_LPJ_G0002687.1 mouse_genomes_project 1 58999872 59064004 - Gm15759 antisense antisense MGP_LPJ_T0098753.1 MGP_LPJ_G0037016.1 mouse_genomes_project 1 71387351 71387477 - Gm23879 snRNA snRNA MGP_LPJ_T0000452.1 MGP_LPJ_G0000388.1 mouse_genomes_project 1 23838167 23841670 - TEC TEC MGP_LPJ_T0016946.1 MGP_LPJ_G0015017.1 mouse_genomes_project 1 76857897 76871304 - Gm29253 processed_transcript processed_transcript MGP_LPJ_T0022351.1 MGP_LPJ_G0016467.1 mouse_genomes_project 1 143971995 143991490 - MGP_LPJ_P0022351 Lhx9 protein_coding protein_coding MGP_LPJ_T0022352.1 MGP_LPJ_G0016467.1 mouse_genomes_project 1 143971995 143997246 - MGP_LPJ_P0022352 Lhx9 protein_coding protein_coding MGP_LPJ_T0022353.1 MGP_LPJ_G0016467.1 mouse_genomes_project 1 143971995 143998738 - MGP_LPJ_P0022353 Lhx9 protein_coding protein_coding MGP_LPJ_T0022354.1 MGP_LPJ_G0016467.1 mouse_genomes_project 1 143980046 143991462 - MGP_LPJ_P0022354 Lhx9 protein_coding protein_coding MGP_LPJ_T0022355.1 MGP_LPJ_G0016467.1 mouse_genomes_project 1 143980469 143998793 - MGP_LPJ_P0022355 Lhx9 protein_coding unknown_likely_coding MGP_LPJ_T0022356.1 MGP_LPJ_G0016467.1 mouse_genomes_project 1 143980816 143982743 - Lhx9 protein_coding retained_intron MGP_LPJ_T0022357.1 MGP_LPJ_G0016467.1 mouse_genomes_project 1 143981952 143991487 - MGP_LPJ_P0022357 Lhx9 protein_coding nonsense_mediated_decay MGP_LPJ_T0000685.1 MGP_LPJ_G0000619.1 mouse_genomes_project 1 143037074 143040097 + TEC TEC MGP_LPJ_T0000686.1 MGP_LPJ_G0000619.1 mouse_genomes_project 1 143037993 143040097 + TEC TEC MGP_LPJ_T0000644.1 MGP_LPJ_G0000579.1 mouse_genomes_project 1 131794122 131795467 + TEC TEC MGP_LPJ_T0020077.1 MGP_LPJ_G0015997.1 mouse_genomes_project 1 62599666 63064015 + Pard3b protein_coding processed_transcript MGP_LPJ_T0020078.1 MGP_LPJ_G0015997.1 mouse_genomes_project 1 62599666 63653210 + MGP_LPJ_P0020078 Pard3b protein_coding protein_coding MGP_LPJ_T0020079.1 MGP_LPJ_G0015997.1 mouse_genomes_project 1 62599717 62740766 + Pard3b protein_coding retained_intron MGP_LPJ_T0020080.1 MGP_LPJ_G0015997.1 mouse_genomes_project 1 62599728 63159374 + Pard3b protein_coding retained_intron MGP_LPJ_T0020081.1 MGP_LPJ_G0015997.1 mouse_genomes_project 1 62600085 63648875 + MGP_LPJ_P0020081 Pard3b protein_coding protein_coding MGP_LPJ_T0020082.1 MGP_LPJ_G0015997.1 mouse_genomes_project 1 62600085 63653210 + MGP_LPJ_P0020082 Pard3b protein_coding protein_coding MGP_LPJ_T0098800.1 MGP_LPJ_G0037063.1 mouse_genomes_project 1 178406704 178406820 - Gm24871 snRNA snRNA MGP_LPJ_T0000535.1 MGP_LPJ_G0000470.1 mouse_genomes_project 1 67974616 67977719 - TEC TEC MGP_LPJ_T0009485.1 MGP_LPJ_G0007603.1 mouse_genomes_project 1 11778424 11779632 + miRNA miRNA MGP_LPJ_T0101736.1 MGP_LPJ_G0039774.1 mouse_genomes_project 1 181612188 181613287 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0000727.1 MGP_LPJ_G0000660.1 mouse_genomes_project 1 162351278 162351922 - TEC TEC MGP_LPJ_T0011925.1 MGP_LPJ_G0010016.1 mouse_genomes_project 1 18800081 18801280 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098806.1 MGP_LPJ_G0037069.1 mouse_genomes_project 1 184037539 184037647 + Gm26104 snRNA snRNA MGP_LPJ_T0009492.1 MGP_LPJ_G0007610.1 mouse_genomes_project 1 27827088 27827213 + Mir6342 miRNA miRNA MGP_LPJ_T0006075.1 MGP_LPJ_G0005086.1 mouse_genomes_project 1 199432482 199433864 + D730003I15Rik lincRNA lincRNA MGP_LPJ_T0006076.1 MGP_LPJ_G0005086.1 mouse_genomes_project 1 199432502 199434169 + D730003I15Rik lincRNA lincRNA MGP_LPJ_T0020270.1 MGP_LPJ_G0016034.1 mouse_genomes_project 1 68364020 68487616 + MGP_LPJ_P0020270 Cps1 protein_coding protein_coding MGP_LPJ_T0019662.1 MGP_LPJ_G0015921.1 mouse_genomes_project 1 52168860 52241033 - MGP_LPJ_P0019662 Gls protein_coding protein_coding MGP_LPJ_T0019663.1 MGP_LPJ_G0015921.1 mouse_genomes_project 1 52171379 52240112 - MGP_LPJ_P0019663 Gls protein_coding protein_coding MGP_LPJ_T0019664.1 MGP_LPJ_G0015921.1 mouse_genomes_project 1 52171566 52197035 - MGP_LPJ_P0019664 Gls protein_coding protein_coding MGP_LPJ_T0019665.1 MGP_LPJ_G0015921.1 mouse_genomes_project 1 52171702 52174420 - Gls protein_coding retained_intron MGP_LPJ_T0019666.1 MGP_LPJ_G0015921.1 mouse_genomes_project 1 52171720 52174590 - Gls protein_coding retained_intron MGP_LPJ_T0019667.1 MGP_LPJ_G0015921.1 mouse_genomes_project 1 52173891 52197036 - Gls protein_coding retained_intron MGP_LPJ_T0019668.1 MGP_LPJ_G0015921.1 mouse_genomes_project 1 52189591 52241042 - MGP_LPJ_P0019668 Gls protein_coding protein_coding MGP_LPJ_T0019669.1 MGP_LPJ_G0015921.1 mouse_genomes_project 1 52190787 52205393 - Gls protein_coding retained_intron MGP_LPJ_T0019670.1 MGP_LPJ_G0015921.1 mouse_genomes_project 1 52190787 52220022 - MGP_LPJ_P0019670 Gls protein_coding protein_coding MGP_LPJ_T0019671.1 MGP_LPJ_G0015921.1 mouse_genomes_project 1 52193812 52197035 - MGP_LPJ_P0019671 Gls protein_coding protein_coding MGP_LPJ_T0019672.1 MGP_LPJ_G0015921.1 mouse_genomes_project 1 52195595 52202269 - Gls protein_coding retained_intron MGP_LPJ_T0019673.1 MGP_LPJ_G0015921.1 mouse_genomes_project 1 52197325 52223414 - Gls protein_coding processed_transcript MGP_LPJ_T0019674.1 MGP_LPJ_G0015921.1 mouse_genomes_project 1 52201372 52205285 - Gls protein_coding retained_intron MGP_LPJ_T0019675.1 MGP_LPJ_G0015921.1 mouse_genomes_project 1 52209762 52223414 - Gls protein_coding retained_intron MGP_LPJ_T0019676.1 MGP_LPJ_G0015921.1 mouse_genomes_project 1 52210770 52222349 - Gls protein_coding retained_intron MGP_LPJ_T0019677.1 MGP_LPJ_G0015921.1 mouse_genomes_project 1 52212870 52223763 - Gls protein_coding retained_intron MGP_LPJ_T0019678.1 MGP_LPJ_G0015921.1 mouse_genomes_project 1 52222333 52240618 - Gls protein_coding processed_transcript MGP_LPJ_T0022075.1 MGP_LPJ_G0016408.1 mouse_genomes_project 1 138498582 138543836 - MGP_LPJ_P0022075 Zc3h11a protein_coding protein_coding MGP_LPJ_T0022076.1 MGP_LPJ_G0016408.1 mouse_genomes_project 1 138498591 138543898 - MGP_LPJ_P0022076 Zc3h11a protein_coding protein_coding MGP_LPJ_T0022078.1 MGP_LPJ_G0016408.1 mouse_genomes_project 1 138506132 138508774 - Zc3h11a protein_coding processed_transcript MGP_LPJ_T0022079.1 MGP_LPJ_G0016408.1 mouse_genomes_project 1 138508671 138521732 - MGP_LPJ_P0022079 Zc3h11a protein_coding protein_coding MGP_LPJ_T0022080.1 MGP_LPJ_G0016408.1 mouse_genomes_project 1 138521445 138543896 - MGP_LPJ_P0022080 Zc3h11a protein_coding protein_coding MGP_LPJ_T0022081.1 MGP_LPJ_G0016408.1 mouse_genomes_project 1 138521703 138543876 - MGP_LPJ_P0022081 Zc3h11a protein_coding protein_coding MGP_LPJ_T0022082.1 MGP_LPJ_G0016408.1 mouse_genomes_project 1 138522823 138543878 - Zc3h11a protein_coding retained_intron MGP_LPJ_T0022083.1 MGP_LPJ_G0016408.1 mouse_genomes_project 1 138523114 138543800 - MGP_LPJ_P0022083 Zc3h11a protein_coding protein_coding MGP_LPJ_T0022084.1 MGP_LPJ_G0016408.1 mouse_genomes_project 1 138528237 138543814 - MGP_LPJ_P0022084 Zc3h11a protein_coding protein_coding MGP_LPJ_T0022085.1 MGP_LPJ_G0016408.1 mouse_genomes_project 1 138529673 138543799 - Zc3h11a protein_coding retained_intron MGP_LPJ_T0022086.1 MGP_LPJ_G0016408.1 mouse_genomes_project 1 138529926 138543886 - Zc3h11a protein_coding processed_transcript MGP_LPJ_T0022087.1 MGP_LPJ_G0016408.1 mouse_genomes_project 1 138536946 138543877 - Zc3h11a protein_coding processed_transcript MGP_LPJ_T0022088.1 MGP_LPJ_G0016408.1 mouse_genomes_project 1 138537290 138543898 - Zc3h11a protein_coding retained_intron MGP_LPJ_T0023020.1 MGP_LPJ_G0016591.1 mouse_genomes_project 1 170274481 170404623 + MGP_LPJ_P0023020 Kifap3 protein_coding protein_coding MGP_LPJ_T0023021.1 MGP_LPJ_G0016591.1 mouse_genomes_project 1 170274481 170404623 + MGP_LPJ_P0023021 Kifap3 protein_coding protein_coding MGP_LPJ_T0002827.1 MGP_LPJ_G0002682.1 mouse_genomes_project 1 51174410 51304324 - 9330175M20Rik antisense antisense MGP_LPJ_T0098802.1 MGP_LPJ_G0037065.1 mouse_genomes_project 1 178650142 178650249 - Gm22950 snRNA snRNA MGP_LPJ_T0023716.1 MGP_LPJ_G0016773.1 mouse_genomes_project 1 186557607 187158384 - MGP_LPJ_P0023716 Smyd3 protein_coding protein_coding MGP_LPJ_T0023717.1 MGP_LPJ_G0016773.1 mouse_genomes_project 1 186560693 186873035 - Smyd3 protein_coding processed_transcript MGP_LPJ_T0023718.1 MGP_LPJ_G0016773.1 mouse_genomes_project 1 186560798 187007063 - Smyd3 protein_coding processed_transcript MGP_LPJ_T0023719.1 MGP_LPJ_G0016773.1 mouse_genomes_project 1 186562970 186599563 - Smyd3 protein_coding processed_transcript MGP_LPJ_T0023720.1 MGP_LPJ_G0016773.1 mouse_genomes_project 1 187010916 187038811 - Smyd3 protein_coding processed_transcript MGP_LPJ_T0023721.1 MGP_LPJ_G0016773.1 mouse_genomes_project 1 187028380 187158391 - MGP_LPJ_P0023721 Smyd3 protein_coding protein_coding MGP_LPJ_T0023722.1 MGP_LPJ_G0016773.1 mouse_genomes_project 1 187146523 187158355 - MGP_LPJ_P0023722 Smyd3 protein_coding protein_coding MGP_LPJ_T0012058.1 MGP_LPJ_G0010149.1 mouse_genomes_project 1 61546838 61547310 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009548.1 MGP_LPJ_G0007666.1 mouse_genomes_project 1 138614990 138615078 - Mir6903 miRNA miRNA MGP_LPJ_T0101688.1 MGP_LPJ_G0039726.1 mouse_genomes_project 1 71504344 71504432 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0016965.1 MGP_LPJ_G0015024.1 mouse_genomes_project 1 136728890 136783993 + Gm29103 processed_transcript processed_transcript MGP_LPJ_T0005717.1 MGP_LPJ_G0004811.1 mouse_genomes_project 1 40719713 40724375 - lincRNA lincRNA MGP_LPJ_T0009505.1 MGP_LPJ_G0007623.1 mouse_genomes_project 1 54347889 54347961 + Mir7681 miRNA miRNA MGP_LPJ_T0020377.1 MGP_LPJ_G0016057.1 mouse_genomes_project 1 75873096 75875941 - MGP_LPJ_P0020377 Cxcr1 protein_coding protein_coding MGP_LPJ_T0020378.1 MGP_LPJ_G0016057.1 mouse_genomes_project 1 75873096 75874547 - MGP_LPJ_P0020378 Cxcr1 protein_coding protein_coding MGP_LPJ_T0012121.1 MGP_LPJ_G0010212.1 mouse_genomes_project 1 85085478 85086108 + processed_pseudogene processed_pseudogene MGP_LPJ_T0019758.1 MGP_LPJ_G0015942.1 mouse_genomes_project 1 55163898 55167172 - Ankrd44 protein_coding retained_intron MGP_LPJ_T0019759.1 MGP_LPJ_G0015942.1 mouse_genomes_project 1 55163898 55460051 - MGP_LPJ_P0019759 Ankrd44 protein_coding protein_coding MGP_LPJ_T0019760.1 MGP_LPJ_G0015942.1 mouse_genomes_project 1 55163900 55460051 - MGP_LPJ_P0019760 Ankrd44 protein_coding protein_coding MGP_LPJ_T0019761.1 MGP_LPJ_G0015942.1 mouse_genomes_project 1 55167655 55176442 - MGP_LPJ_P0019761 Ankrd44 protein_coding protein_coding MGP_LPJ_T0019762.1 MGP_LPJ_G0015942.1 mouse_genomes_project 1 55170227 55289651 - MGP_LPJ_P0019762 Ankrd44 protein_coding protein_coding MGP_LPJ_T0019763.1 MGP_LPJ_G0015942.1 mouse_genomes_project 1 55173455 55208620 - Ankrd44 protein_coding retained_intron MGP_LPJ_T0019764.1 MGP_LPJ_G0015942.1 mouse_genomes_project 1 55185942 55246313 - Ankrd44 protein_coding retained_intron MGP_LPJ_T0019765.1 MGP_LPJ_G0015942.1 mouse_genomes_project 1 55245804 55247660 - Ankrd44 protein_coding retained_intron MGP_LPJ_T0019766.1 MGP_LPJ_G0015942.1 mouse_genomes_project 1 55253130 55259778 - Ankrd44 protein_coding retained_intron MGP_LPJ_T0019767.1 MGP_LPJ_G0015942.1 mouse_genomes_project 1 55259435 55460018 - Ankrd44 protein_coding retained_intron MGP_LPJ_T0019768.1 MGP_LPJ_G0015942.1 mouse_genomes_project 1 55267432 55292346 - Ankrd44 protein_coding retained_intron MGP_LPJ_T0019769.1 MGP_LPJ_G0015942.1 mouse_genomes_project 1 55286503 55294734 - Ankrd44 protein_coding processed_transcript MGP_LPJ_T0019770.1 MGP_LPJ_G0015942.1 mouse_genomes_project 1 55286821 55460051 - Ankrd44 protein_coding retained_intron MGP_LPJ_T0019771.1 MGP_LPJ_G0015942.1 mouse_genomes_project 1 55288301 55348809 - Ankrd44 protein_coding processed_transcript MGP_LPJ_T0019772.1 MGP_LPJ_G0015942.1 mouse_genomes_project 1 55292714 55423006 - MGP_LPJ_P0019772 Ankrd44 protein_coding protein_coding MGP_LPJ_T0002983.1 MGP_LPJ_G0002801.1 mouse_genomes_project 1 185875204 185880501 - B230369F24Rik antisense antisense MGP_LPJ_T0023590.1 MGP_LPJ_G0016735.1 mouse_genomes_project 1 181149744 181163142 - MGP_LPJ_P0023590 protein_coding protein_coding MGP_LPJ_T0002885.1 MGP_LPJ_G0002727.1 mouse_genomes_project 1 96548120 96573843 + Gm10550 antisense antisense MGP_LPJ_T0000831.1 MGP_LPJ_G0000762.1 mouse_genomes_project 1 201082825 201084922 - TEC TEC MGP_LPJ_T0000832.1 MGP_LPJ_G0000762.1 mouse_genomes_project 1 201082876 201084427 - TEC TEC MGP_LPJ_T0020895.1 MGP_LPJ_G0016149.1 mouse_genomes_project 1 87955753 88023199 + MGP_LPJ_P0020895 Sp100 protein_coding protein_coding MGP_LPJ_T0020896.1 MGP_LPJ_G0016149.1 mouse_genomes_project 1 87955753 88009589 + MGP_LPJ_P0020896 Sp100 protein_coding nonsense_mediated_decay MGP_LPJ_T0020897.1 MGP_LPJ_G0016149.1 mouse_genomes_project 1 87980305 87992160 + Sp100 protein_coding processed_transcript MGP_LPJ_T0020898.1 MGP_LPJ_G0016149.1 mouse_genomes_project 1 87982197 87988716 + Sp100 protein_coding retained_intron MGP_LPJ_T0020899.1 MGP_LPJ_G0016149.1 mouse_genomes_project 1 88007159 88012892 + Sp100 protein_coding retained_intron MGP_LPJ_T0020900.1 MGP_LPJ_G0016149.1 mouse_genomes_project 1 88007517 88022609 + MGP_LPJ_P0020900 Sp100 protein_coding protein_coding MGP_LPJ_T0020901.1 MGP_LPJ_G0016149.1 mouse_genomes_project 1 88016644 88021198 + MGP_LPJ_P0020901 Sp100 protein_coding protein_coding MGP_LPJ_T0012031.1 MGP_LPJ_G0010122.1 mouse_genomes_project 1 51923813 51924411 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000415.1 MGP_LPJ_G0000353.1 mouse_genomes_project 1 10786557 10788173 - TEC TEC MGP_LPJ_T0019923.1 MGP_LPJ_G0015972.1 mouse_genomes_project 1 59516196 59521652 + Cflar protein_coding processed_transcript MGP_LPJ_T0019924.1 MGP_LPJ_G0015972.1 mouse_genomes_project 1 59516196 59564921 + Cflar protein_coding processed_transcript MGP_LPJ_T0019925.1 MGP_LPJ_G0015972.1 mouse_genomes_project 1 59516204 59522069 + Cflar protein_coding processed_transcript MGP_LPJ_T0019926.1 MGP_LPJ_G0015972.1 mouse_genomes_project 1 59516222 59521655 + Cflar protein_coding processed_transcript MGP_LPJ_T0019927.1 MGP_LPJ_G0015972.1 mouse_genomes_project 1 59516232 59526170 + Cflar protein_coding processed_transcript MGP_LPJ_T0019928.1 MGP_LPJ_G0015972.1 mouse_genomes_project 1 59516239 59564556 + MGP_LPJ_P0019928 Cflar protein_coding protein_coding MGP_LPJ_T0019929.1 MGP_LPJ_G0015972.1 mouse_genomes_project 1 59516248 59570524 + MGP_LPJ_P0019929 Cflar protein_coding protein_coding MGP_LPJ_T0019930.1 MGP_LPJ_G0015972.1 mouse_genomes_project 1 59521059 59546097 + MGP_LPJ_P0019930 Cflar protein_coding protein_coding MGP_LPJ_T0019931.1 MGP_LPJ_G0015972.1 mouse_genomes_project 1 59521067 59531686 + Cflar protein_coding processed_transcript MGP_LPJ_T0019932.1 MGP_LPJ_G0015972.1 mouse_genomes_project 1 59521082 59565745 + MGP_LPJ_P0019932 Cflar protein_coding protein_coding MGP_LPJ_T0019933.1 MGP_LPJ_G0015972.1 mouse_genomes_project 1 59521651 59526178 + Cflar protein_coding retained_intron MGP_LPJ_T0019934.1 MGP_LPJ_G0015972.1 mouse_genomes_project 1 59542164 59563033 + Cflar protein_coding processed_transcript MGP_LPJ_T0018819.1 MGP_LPJ_G0015750.1 mouse_genomes_project 1 7620785 7716172 - MGP_LPJ_P0018819 Arfgef1 protein_coding protein_coding MGP_LPJ_T0018820.1 MGP_LPJ_G0015750.1 mouse_genomes_project 1 7621904 7624916 - Arfgef1 protein_coding retained_intron MGP_LPJ_T0018821.1 MGP_LPJ_G0015750.1 mouse_genomes_project 1 7630619 7637745 - Arfgef1 protein_coding retained_intron MGP_LPJ_T0018822.1 MGP_LPJ_G0015750.1 mouse_genomes_project 1 7639613 7643275 - Arfgef1 protein_coding retained_intron MGP_LPJ_T0018823.1 MGP_LPJ_G0015750.1 mouse_genomes_project 1 7656277 7716172 - MGP_LPJ_P0018823 Arfgef1 protein_coding protein_coding MGP_LPJ_T0018824.1 MGP_LPJ_G0015750.1 mouse_genomes_project 1 7692203 7693365 - Arfgef1 protein_coding retained_intron MGP_LPJ_T0018825.1 MGP_LPJ_G0015750.1 mouse_genomes_project 1 7692418 7697471 - Arfgef1 protein_coding retained_intron MGP_LPJ_T0000558.1 MGP_LPJ_G0000493.1 mouse_genomes_project 1 80233809 80234617 + TEC TEC MGP_LPJ_T0012376.1 MGP_LPJ_G0010467.1 mouse_genomes_project 1 202157063 202157991 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005943.1 MGP_LPJ_G0004983.1 mouse_genomes_project 1 143027577 143031199 - Gm26979 lincRNA lincRNA MGP_LPJ_T0011947.1 MGP_LPJ_G0010038.1 mouse_genomes_project 1 27602362 27602912 + processed_pseudogene processed_pseudogene MGP_LPJ_T0020178.1 MGP_LPJ_G0016016.1 mouse_genomes_project 1 66138888 66141520 - MGP_LPJ_P0020178 Cryge protein_coding protein_coding MGP_LPJ_T0020179.1 MGP_LPJ_G0016016.1 mouse_genomes_project 1 66138891 66141490 - MGP_LPJ_P0020179 Cryge protein_coding protein_coding MGP_LPJ_T0002796.1 MGP_LPJ_G0002657.1 mouse_genomes_project 1 29645770 29659848 + Gm29128 antisense antisense MGP_LPJ_T0020409.1 MGP_LPJ_G0016064.1 mouse_genomes_project 1 76076863 76088426 + MGP_LPJ_P0020409 Slc11a1 protein_coding protein_coding MGP_LPJ_T0020410.1 MGP_LPJ_G0016064.1 mouse_genomes_project 1 76076871 76088723 + Slc11a1 protein_coding retained_intron MGP_LPJ_T0020411.1 MGP_LPJ_G0016064.1 mouse_genomes_project 1 76076871 76088733 + MGP_LPJ_P0020411 Slc11a1 protein_coding protein_coding MGP_LPJ_T0020412.1 MGP_LPJ_G0016064.1 mouse_genomes_project 1 76076893 76088722 + Slc11a1 protein_coding retained_intron MGP_LPJ_T0020413.1 MGP_LPJ_G0016064.1 mouse_genomes_project 1 76076921 76084586 + Slc11a1 protein_coding processed_transcript MGP_LPJ_T0020414.1 MGP_LPJ_G0016064.1 mouse_genomes_project 1 76077240 76078559 + Slc11a1 protein_coding processed_transcript MGP_LPJ_T0020415.1 MGP_LPJ_G0016064.1 mouse_genomes_project 1 76078325 76081679 + Slc11a1 protein_coding processed_transcript MGP_LPJ_T0020416.1 MGP_LPJ_G0016064.1 mouse_genomes_project 1 76084410 76086844 + Slc11a1 protein_coding retained_intron MGP_LPJ_T0020417.1 MGP_LPJ_G0016064.1 mouse_genomes_project 1 76085704 76086505 + Slc11a1 protein_coding retained_intron MGP_LPJ_T0020418.1 MGP_LPJ_G0016064.1 mouse_genomes_project 1 76086011 76086844 + Slc11a1 protein_coding processed_transcript MGP_LPJ_T0020419.1 MGP_LPJ_G0016064.1 mouse_genomes_project 1 76086270 76087868 + Slc11a1 protein_coding processed_transcript MGP_LPJ_T0021527.1 MGP_LPJ_G0016287.1 mouse_genomes_project 1 109169976 109240963 + MGP_LPJ_P0021527 Tnfrsf11a protein_coding protein_coding MGP_LPJ_T0021528.1 MGP_LPJ_G0016287.1 mouse_genomes_project 1 109170008 109206897 + Tnfrsf11a protein_coding retained_intron MGP_LPJ_T0021529.1 MGP_LPJ_G0016287.1 mouse_genomes_project 1 109212349 109217762 + Tnfrsf11a protein_coding retained_intron MGP_LPJ_T0020134.1 MGP_LPJ_G0016005.1 mouse_genomes_project 1 64684300 64752487 - MGP_LPJ_P0020134 Dytn protein_coding protein_coding MGP_LPJ_T0020135.1 MGP_LPJ_G0016005.1 mouse_genomes_project 1 64726448 64752470 - Dytn protein_coding retained_intron MGP_LPJ_T0011946.1 MGP_LPJ_G0010037.1 mouse_genomes_project 1 27273759 27274066 + processed_pseudogene processed_pseudogene MGP_LPJ_T0019804.1 MGP_LPJ_G0015950.1 mouse_genomes_project 1 55806268 55861773 - MGP_LPJ_P0019804 Boll protein_coding nonsense_mediated_decay MGP_LPJ_T0019805.1 MGP_LPJ_G0015950.1 mouse_genomes_project 1 55827076 55931595 - MGP_LPJ_P0019805 Boll protein_coding protein_coding MGP_LPJ_T0019806.1 MGP_LPJ_G0015950.1 mouse_genomes_project 1 55861663 55934173 - MGP_LPJ_P0019806 Boll protein_coding protein_coding MGP_LPJ_T0019807.1 MGP_LPJ_G0015950.1 mouse_genomes_project 1 55861663 55933580 - MGP_LPJ_P0019807 Boll protein_coding protein_coding MGP_LPJ_T0019808.1 MGP_LPJ_G0015950.1 mouse_genomes_project 1 55861663 55934173 - MGP_LPJ_P0019808 Boll protein_coding nonsense_mediated_decay MGP_LPJ_T0019809.1 MGP_LPJ_G0015950.1 mouse_genomes_project 1 55916667 55934323 - MGP_LPJ_P0019809 Boll protein_coding protein_coding MGP_LPJ_T0019810.1 MGP_LPJ_G0015950.1 mouse_genomes_project 1 55919296 55931595 - Boll protein_coding processed_transcript MGP_LPJ_T0024167.1 MGP_LPJ_G0016863.1 mouse_genomes_project 1 199972639 200045310 + MGP_LPJ_P0024167 Lpgat1 protein_coding protein_coding MGP_LPJ_T0024168.1 MGP_LPJ_G0016863.1 mouse_genomes_project 1 199972639 199974203 + MGP_LPJ_P0024168 Lpgat1 protein_coding protein_coding MGP_LPJ_T0024169.1 MGP_LPJ_G0016863.1 mouse_genomes_project 1 199972832 199974591 + Lpgat1 protein_coding retained_intron MGP_LPJ_T0024170.1 MGP_LPJ_G0016863.1 mouse_genomes_project 1 199973194 200038913 + MGP_LPJ_P0024170 Lpgat1 protein_coding protein_coding MGP_LPJ_T0024171.1 MGP_LPJ_G0016863.1 mouse_genomes_project 1 199973326 200018836 + MGP_LPJ_P0024171 Lpgat1 protein_coding protein_coding MGP_LPJ_T0000737.1 MGP_LPJ_G0000670.1 mouse_genomes_project 1 164566540 164570376 + TEC TEC MGP_LPJ_T0005723.1 MGP_LPJ_G0004815.1 mouse_genomes_project 1 41520458 41520854 + lincRNA lincRNA MGP_LPJ_T0000547.1 MGP_LPJ_G0000482.1 mouse_genomes_project 1 71204568 71206454 + TEC TEC MGP_LPJ_T0009567.1 MGP_LPJ_G0007685.1 mouse_genomes_project 1 175716558 175716678 - Mir6354 miRNA miRNA MGP_LPJ_T0000541.1 MGP_LPJ_G0000476.1 mouse_genomes_project 1 69230688 69233013 + TEC TEC MGP_LPJ_T0000719.1 MGP_LPJ_G0000652.1 mouse_genomes_project 1 159206778 159210116 - TEC TEC MGP_LPJ_T0100010.1 MGP_LPJ_G0038273.1 mouse_genomes_project 1 116235095 116235231 + Gm22331 snoRNA snoRNA MGP_LPJ_T0012292.1 MGP_LPJ_G0010383.1 mouse_genomes_project 1 161243579 161244160 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005695.1 MGP_LPJ_G0004793.1 mouse_genomes_project 1 29558576 29560149 + Gm28644 lincRNA lincRNA MGP_LPJ_T0000691.1 MGP_LPJ_G0000624.1 mouse_genomes_project 1 143390277 143390697 + TEC TEC MGP_LPJ_T0020908.1 MGP_LPJ_G0016151.1 mouse_genomes_project 1 88110049 88171366 + MGP_LPJ_P0020908 Cab39 protein_coding protein_coding MGP_LPJ_T0020909.1 MGP_LPJ_G0016151.1 mouse_genomes_project 1 88110149 88136958 + MGP_LPJ_P0020909 Cab39 protein_coding protein_coding MGP_LPJ_T0020910.1 MGP_LPJ_G0016151.1 mouse_genomes_project 1 88111069 88157042 + MGP_LPJ_P0020910 Cab39 protein_coding protein_coding MGP_LPJ_T0020911.1 MGP_LPJ_G0016151.1 mouse_genomes_project 1 88111112 88170155 + MGP_LPJ_P0020911 Cab39 protein_coding protein_coding MGP_LPJ_T0020912.1 MGP_LPJ_G0016151.1 mouse_genomes_project 1 88162802 88165793 + Cab39 protein_coding retained_intron MGP_LPJ_T0000844.1 MGP_LPJ_G0000774.1 mouse_genomes_project 1 203387426 203389640 - TEC TEC MGP_LPJ_T0011938.1 MGP_LPJ_G0010029.1 mouse_genomes_project 1 23090489 23091405 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012093.1 MGP_LPJ_G0010184.1 mouse_genomes_project 1 70791779 70792530 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011260.1 MGP_LPJ_G0009378.1 mouse_genomes_project 1 50107910 50108042 - Gm27330 misc_RNA misc_RNA MGP_LPJ_T0000523.1 MGP_LPJ_G0000458.1 mouse_genomes_project 1 61833259 61834660 + TEC TEC MGP_LPJ_T0098720.1 MGP_LPJ_G0036983.1 mouse_genomes_project 1 273954 274064 + Gm26206 snRNA snRNA MGP_LPJ_T0000706.1 MGP_LPJ_G0000639.1 mouse_genomes_project 1 152547327 152549226 + TEC TEC MGP_LPJ_T0021882.1 MGP_LPJ_G0016369.1 mouse_genomes_project 1 135887488 135892710 + Eif2d protein_coding retained_intron MGP_LPJ_T0021883.1 MGP_LPJ_G0016369.1 mouse_genomes_project 1 135887488 135908477 + MGP_LPJ_P0021883 Eif2d protein_coding protein_coding MGP_LPJ_T0021884.1 MGP_LPJ_G0016369.1 mouse_genomes_project 1 135887488 135909716 + MGP_LPJ_P0021884 Eif2d protein_coding protein_coding MGP_LPJ_T0021885.1 MGP_LPJ_G0016369.1 mouse_genomes_project 1 135887488 135916736 + MGP_LPJ_P0021885 Eif2d protein_coding nonsense_mediated_decay MGP_LPJ_T0021886.1 MGP_LPJ_G0016369.1 mouse_genomes_project 1 135887488 135917150 + MGP_LPJ_P0021886 Eif2d protein_coding protein_coding MGP_LPJ_T0021887.1 MGP_LPJ_G0016369.1 mouse_genomes_project 1 135887488 135911090 + MGP_LPJ_P0021887 Eif2d protein_coding nonsense_mediated_decay MGP_LPJ_T0021888.1 MGP_LPJ_G0016369.1 mouse_genomes_project 1 135887488 135924400 + MGP_LPJ_P0021888 Eif2d protein_coding nonsense_mediated_decay MGP_LPJ_T0021889.1 MGP_LPJ_G0016369.1 mouse_genomes_project 1 135902617 135907748 + Eif2d protein_coding processed_transcript MGP_LPJ_T0012251.1 MGP_LPJ_G0010342.1 mouse_genomes_project 1 143512748 143512899 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011254.1 MGP_LPJ_G0009372.1 mouse_genomes_project 1 11521124 11521432 + Gm25491 misc_RNA misc_RNA MGP_LPJ_T0021078.1 MGP_LPJ_G0016186.1 mouse_genomes_project 1 90227821 90248518 + Sag protein_coding retained_intron MGP_LPJ_T0021079.1 MGP_LPJ_G0016186.1 mouse_genomes_project 1 90227821 90257784 + Sag protein_coding retained_intron MGP_LPJ_T0021080.1 MGP_LPJ_G0016186.1 mouse_genomes_project 1 90227821 90258270 + Sag protein_coding retained_intron MGP_LPJ_T0021081.1 MGP_LPJ_G0016186.1 mouse_genomes_project 1 90227821 90241912 + Sag protein_coding retained_intron MGP_LPJ_T0021082.1 MGP_LPJ_G0016186.1 mouse_genomes_project 1 90227821 90268412 + MGP_LPJ_P0021082 Sag protein_coding protein_coding MGP_LPJ_T0021083.1 MGP_LPJ_G0016186.1 mouse_genomes_project 1 90227821 90268547 + MGP_LPJ_P0021083 Sag protein_coding protein_coding MGP_LPJ_T0021084.1 MGP_LPJ_G0016186.1 mouse_genomes_project 1 90236212 90247877 + Sag protein_coding processed_transcript MGP_LPJ_T0021085.1 MGP_LPJ_G0016186.1 mouse_genomes_project 1 90244754 90247887 + Sag protein_coding processed_transcript MGP_LPJ_T0021086.1 MGP_LPJ_G0016186.1 mouse_genomes_project 1 90249707 90258288 + Sag protein_coding retained_intron MGP_LPJ_T0021499.1 MGP_LPJ_G0016282.1 mouse_genomes_project 1 102917601 103668369 + MGP_LPJ_P0021499 Cntnap5b protein_coding protein_coding MGP_LPJ_T0021500.1 MGP_LPJ_G0016282.1 mouse_genomes_project 1 103272731 103669462 + MGP_LPJ_P0021500 Cntnap5b protein_coding protein_coding MGP_LPJ_T0021501.1 MGP_LPJ_G0016282.1 mouse_genomes_project 1 103438296 103549246 + Cntnap5b protein_coding processed_transcript MGP_LPJ_T0000566.1 MGP_LPJ_G0000501.1 mouse_genomes_project 1 82654512 82658063 - TEC TEC MGP_LPJ_T0100005.1 MGP_LPJ_G0038268.1 mouse_genomes_project 1 106210364 106210498 - Gm22034 snoRNA snoRNA MGP_LPJ_T0022271.1 MGP_LPJ_G0016450.1 mouse_genomes_project 1 140890207 140940126 - MGP_LPJ_P0022271 Pkp1 protein_coding protein_coding MGP_LPJ_T0022272.1 MGP_LPJ_G0016450.1 mouse_genomes_project 1 140891762 140940039 - MGP_LPJ_P0022272 Pkp1 protein_coding protein_coding MGP_LPJ_T0022273.1 MGP_LPJ_G0016450.1 mouse_genomes_project 1 140892178 140940061 - MGP_LPJ_P0022273 Pkp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0022274.1 MGP_LPJ_G0016450.1 mouse_genomes_project 1 140896130 140897088 - Pkp1 protein_coding retained_intron MGP_LPJ_T0009486.1 MGP_LPJ_G0007604.1 mouse_genomes_project 1 18522399 18522472 + Mir206 miRNA miRNA MGP_LPJ_T0022011.1 MGP_LPJ_G0016395.1 mouse_genomes_project 1 137368764 137489533 - MGP_LPJ_P0022011 Nfasc protein_coding protein_coding MGP_LPJ_T0022012.1 MGP_LPJ_G0016395.1 mouse_genomes_project 1 137374105 137550239 - MGP_LPJ_P0022012 Nfasc protein_coding protein_coding MGP_LPJ_T0022013.1 MGP_LPJ_G0016395.1 mouse_genomes_project 1 137374194 137443106 - MGP_LPJ_P0022013 Nfasc protein_coding protein_coding MGP_LPJ_T0022014.1 MGP_LPJ_G0016395.1 mouse_genomes_project 1 137380097 137393348 - Nfasc protein_coding processed_transcript MGP_LPJ_T0022015.1 MGP_LPJ_G0016395.1 mouse_genomes_project 1 137406041 137550273 - MGP_LPJ_P0022015 Nfasc protein_coding protein_coding MGP_LPJ_T0022016.1 MGP_LPJ_G0016395.1 mouse_genomes_project 1 137407839 137411365 - Nfasc protein_coding retained_intron MGP_LPJ_T0022017.1 MGP_LPJ_G0016395.1 mouse_genomes_project 1 137425583 137430719 - Nfasc protein_coding retained_intron MGP_LPJ_T0022018.1 MGP_LPJ_G0016395.1 mouse_genomes_project 1 137472605 137550254 - Nfasc protein_coding processed_transcript MGP_LPJ_T0019401.1 MGP_LPJ_G0015866.1 mouse_genomes_project 1 37905377 37949999 - MGP_LPJ_P0019401 Chst10 protein_coding protein_coding MGP_LPJ_T0019402.1 MGP_LPJ_G0015866.1 mouse_genomes_project 1 37905377 37950078 - MGP_LPJ_P0019402 Chst10 protein_coding protein_coding MGP_LPJ_T0019403.1 MGP_LPJ_G0015866.1 mouse_genomes_project 1 37905385 37914228 - MGP_LPJ_P0019403 Chst10 protein_coding nonsense_mediated_decay MGP_LPJ_T0019404.1 MGP_LPJ_G0015866.1 mouse_genomes_project 1 37905387 37950150 - MGP_LPJ_P0019404 Chst10 protein_coding protein_coding MGP_LPJ_T0019405.1 MGP_LPJ_G0015866.1 mouse_genomes_project 1 37912648 37950142 - MGP_LPJ_P0019405 Chst10 protein_coding nonsense_mediated_decay MGP_LPJ_T0019406.1 MGP_LPJ_G0015866.1 mouse_genomes_project 1 37916445 37950123 - MGP_LPJ_P0019406 Chst10 protein_coding protein_coding MGP_LPJ_T0019407.1 MGP_LPJ_G0015866.1 mouse_genomes_project 1 37942591 37949975 - Chst10 protein_coding retained_intron MGP_LPJ_T0019408.1 MGP_LPJ_G0015866.1 mouse_genomes_project 1 37942592 37949999 - Chst10 protein_coding retained_intron MGP_LPJ_T0002866.1 MGP_LPJ_G0002708.1 mouse_genomes_project 1 77088045 77092290 - Gm15178 antisense antisense MGP_LPJ_T0005754.1 MGP_LPJ_G0004832.1 mouse_genomes_project 1 52517399 52581003 + Gm553 lincRNA lincRNA MGP_LPJ_T0012255.1 MGP_LPJ_G0010346.1 mouse_genomes_project 1 144127674 144128308 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012258.1 MGP_LPJ_G0010349.1 mouse_genomes_project 1 145227769 145431799 - processed_pseudogene processed_pseudogene MGP_LPJ_T0021310.1 MGP_LPJ_G0016244.1 mouse_genomes_project 1 95694701 95696156 + MGP_LPJ_P0021310 Dusp28 protein_coding protein_coding MGP_LPJ_T0019482.1 MGP_LPJ_G0015884.1 mouse_genomes_project 1 39715219 39772467 + MGP_LPJ_P0019482 Slc9a4 protein_coding protein_coding MGP_LPJ_T0019483.1 MGP_LPJ_G0015884.1 mouse_genomes_project 1 39715342 39720561 + Slc9a4 protein_coding processed_transcript MGP_LPJ_T0019484.1 MGP_LPJ_G0015884.1 mouse_genomes_project 1 39740811 39743113 + Slc9a4 protein_coding processed_transcript MGP_LPJ_T0019485.1 MGP_LPJ_G0015884.1 mouse_genomes_project 1 39770709 39772158 + Slc9a4 protein_coding retained_intron MGP_LPJ_T0005664.1 MGP_LPJ_G0004769.1 mouse_genomes_project 1 1790269 1793393 - Gm37323 lincRNA lincRNA MGP_LPJ_T0012010.1 MGP_LPJ_G0010101.1 mouse_genomes_project 1 45362471 45362936 + processed_pseudogene processed_pseudogene MGP_LPJ_T0023580.1 MGP_LPJ_G0016727.1 mouse_genomes_project 1 180672354 180689604 + MGP_LPJ_P0023580 BC094916 protein_coding protein_coding MGP_LPJ_T0017021.1 MGP_LPJ_G0015036.1 mouse_genomes_project 1 172341691 172349984 + Gm16565 processed_transcript sense_overlapping MGP_LPJ_T0017022.1 MGP_LPJ_G0015036.1 mouse_genomes_project 1 172341815 172342784 + Gm16565 processed_transcript processed_transcript MGP_LPJ_T0023846.1 MGP_LPJ_G0016796.1 mouse_genomes_project 1 188710359 188736524 - MGP_LPJ_P0023846 Ephx1 protein_coding protein_coding MGP_LPJ_T0023847.1 MGP_LPJ_G0016796.1 mouse_genomes_project 1 188725177 188757940 - MGP_LPJ_P0023847 Ephx1 protein_coding protein_coding MGP_LPJ_T0023848.1 MGP_LPJ_G0016796.1 mouse_genomes_project 1 188725177 188757940 - MGP_LPJ_P0023848 Ephx1 protein_coding protein_coding MGP_LPJ_T0023849.1 MGP_LPJ_G0016796.1 mouse_genomes_project 1 188736502 188761275 - MGP_LPJ_P0023849 Ephx1 protein_coding protein_coding MGP_LPJ_T0000591.1 MGP_LPJ_G0000526.1 mouse_genomes_project 1 89440636 89443564 + TEC TEC MGP_LPJ_T0098741.1 MGP_LPJ_G0037004.1 mouse_genomes_project 1 48236349 48236470 - Gm23240 snRNA snRNA MGP_LPJ_T0000632.1 MGP_LPJ_G0000567.1 mouse_genomes_project 1 127648564 127652074 - TEC TEC MGP_LPJ_T0002800.1 MGP_LPJ_G0002660.1 mouse_genomes_project 1 33584011 33586569 - Gm38336 antisense antisense MGP_LPJ_T0098443.1 MGP_LPJ_G0036724.1 mouse_genomes_project 1 51857787 51860286 - Gm28323 sense_intronic sense_intronic MGP_LPJ_T0022107.1 MGP_LPJ_G0016415.1 mouse_genomes_project 1 138946532 138957649 + MGP_LPJ_P0022107 Fmod protein_coding protein_coding MGP_LPJ_T0022108.1 MGP_LPJ_G0016415.1 mouse_genomes_project 1 138946774 138949751 + MGP_LPJ_P0022108 Fmod protein_coding protein_coding MGP_LPJ_T0002883.1 MGP_LPJ_G0002725.1 mouse_genomes_project 1 96102833 96114106 + Gm28535 antisense antisense MGP_LPJ_T0000689.1 MGP_LPJ_G0000622.1 mouse_genomes_project 1 143082089 143083231 + TEC TEC MGP_LPJ_T0021647.1 MGP_LPJ_G0016315.1 mouse_genomes_project 1 123615619 123618443 + MGP_LPJ_P0021647 Tmem185b protein_coding protein_coding MGP_LPJ_T0021648.1 MGP_LPJ_G0016315.1 mouse_genomes_project 1 123615632 123616689 + Tmem185b protein_coding processed_transcript MGP_LPJ_T0099953.1 MGP_LPJ_G0038216.1 mouse_genomes_project 1 7421704 7421791 - Snord87 snoRNA snoRNA MGP_LPJ_T0000841.1 MGP_LPJ_G0000771.1 mouse_genomes_project 1 203317199 203320138 + TEC TEC MGP_LPJ_T0023018.1 MGP_LPJ_G0016590.1 mouse_genomes_project 1 170204884 170221521 - MGP_LPJ_P0023018 Mettl11b protein_coding protein_coding MGP_LPJ_T0023019.1 MGP_LPJ_G0016590.1 mouse_genomes_project 1 170205627 170221521 - MGP_LPJ_P0023019 Mettl11b protein_coding nonsense_mediated_decay MGP_LPJ_T0000803.1 MGP_LPJ_G0000735.1 mouse_genomes_project 1 189467004 189470817 - TEC TEC MGP_LPJ_T0020766.1 MGP_LPJ_G0016122.1 mouse_genomes_project 1 81718134 81723564 + MGP_LPJ_P0020766 Mrpl44 protein_coding protein_coding MGP_LPJ_T0020767.1 MGP_LPJ_G0016122.1 mouse_genomes_project 1 81718232 81720667 + Mrpl44 protein_coding retained_intron MGP_LPJ_T0012235.1 MGP_LPJ_G0010326.1 mouse_genomes_project 1 133385142 133385564 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021836.1 MGP_LPJ_G0016354.1 mouse_genomes_project 1 135274869 135331455 - MGP_LPJ_P0021836 Zp3r protein_coding protein_coding MGP_LPJ_T0021837.1 MGP_LPJ_G0016354.1 mouse_genomes_project 1 135274869 135331455 - MGP_LPJ_P0021837 Zp3r protein_coding protein_coding MGP_LPJ_T0021838.1 MGP_LPJ_G0016354.1 mouse_genomes_project 1 135274872 135331446 - MGP_LPJ_P0021838 Zp3r protein_coding protein_coding MGP_LPJ_T0000835.1 MGP_LPJ_G0000765.1 mouse_genomes_project 1 201642985 201643613 + TEC TEC MGP_LPJ_T0017024.1 MGP_LPJ_G0015038.1 mouse_genomes_project 1 177734226 177747142 + Gm9929 processed_transcript processed_transcript MGP_LPJ_T0005969.1 MGP_LPJ_G0005004.1 mouse_genomes_project 1 160271262 160286794 + 4930532M18Rik lincRNA lincRNA MGP_LPJ_T0005970.1 MGP_LPJ_G0005004.1 mouse_genomes_project 1 160272551 160286615 + 4930532M18Rik lincRNA lincRNA MGP_LPJ_T0011257.1 MGP_LPJ_G0009375.1 mouse_genomes_project 1 31373787 31374079 + Gm23024 misc_RNA misc_RNA MGP_LPJ_T0020095.1 MGP_LPJ_G0016000.1 mouse_genomes_project 1 64171830 64173196 - Ndufs1 protein_coding retained_intron MGP_LPJ_T0020096.1 MGP_LPJ_G0016000.1 mouse_genomes_project 1 64171830 64204243 - MGP_LPJ_P0020096 Ndufs1 protein_coding protein_coding MGP_LPJ_T0020097.1 MGP_LPJ_G0016000.1 mouse_genomes_project 1 64171838 64175953 - Ndufs1 protein_coding retained_intron MGP_LPJ_T0020098.1 MGP_LPJ_G0016000.1 mouse_genomes_project 1 64171923 64175621 - MGP_LPJ_P0020098 Ndufs1 protein_coding nonsense_mediated_decay MGP_LPJ_T0020099.1 MGP_LPJ_G0016000.1 mouse_genomes_project 1 64171969 64204153 - MGP_LPJ_P0020099 Ndufs1 protein_coding protein_coding MGP_LPJ_T0020100.1 MGP_LPJ_G0016000.1 mouse_genomes_project 1 64178302 64204084 - MGP_LPJ_P0020100 Ndufs1 protein_coding protein_coding MGP_LPJ_T0020101.1 MGP_LPJ_G0016000.1 mouse_genomes_project 1 64178469 64180880 - Ndufs1 protein_coding retained_intron MGP_LPJ_T0020102.1 MGP_LPJ_G0016000.1 mouse_genomes_project 1 64184720 64204090 - Ndufs1 protein_coding retained_intron MGP_LPJ_T0020103.1 MGP_LPJ_G0016000.1 mouse_genomes_project 1 64186742 64204088 - Ndufs1 protein_coding retained_intron MGP_LPJ_T0020104.1 MGP_LPJ_G0016000.1 mouse_genomes_project 1 64191677 64204111 - MGP_LPJ_P0020104 Ndufs1 protein_coding protein_coding MGP_LPJ_T0020105.1 MGP_LPJ_G0016000.1 mouse_genomes_project 1 64192852 64204087 - MGP_LPJ_P0020105 Ndufs1 protein_coding protein_coding MGP_LPJ_T0020106.1 MGP_LPJ_G0016000.1 mouse_genomes_project 1 64196932 64204214 - MGP_LPJ_P0020106 Ndufs1 protein_coding protein_coding MGP_LPJ_T0020107.1 MGP_LPJ_G0016000.1 mouse_genomes_project 1 64198272 64204254 - MGP_LPJ_P0020107 Ndufs1 protein_coding protein_coding MGP_LPJ_T0005768.1 MGP_LPJ_G0004842.1 mouse_genomes_project 1 60353651 60357775 - Gm26813 lincRNA lincRNA MGP_LPJ_T0002901.1 MGP_LPJ_G0002736.1 mouse_genomes_project 1 132527830 132535756 + Gm28800 antisense antisense MGP_LPJ_T0000818.1 MGP_LPJ_G0000749.1 mouse_genomes_project 1 194680607 194682488 - TEC TEC MGP_LPJ_T0022721.1 MGP_LPJ_G0016539.1 mouse_genomes_project 1 162316345 162365584 - MGP_LPJ_P0022721 Tdrd5 protein_coding protein_coding MGP_LPJ_T0022722.1 MGP_LPJ_G0016539.1 mouse_genomes_project 1 162316347 162365263 - MGP_LPJ_P0022722 Tdrd5 protein_coding protein_coding MGP_LPJ_T0022723.1 MGP_LPJ_G0016539.1 mouse_genomes_project 1 162320840 162324578 - Tdrd5 protein_coding processed_transcript MGP_LPJ_T0022724.1 MGP_LPJ_G0016539.1 mouse_genomes_project 1 162328080 162335238 - Tdrd5 protein_coding retained_intron MGP_LPJ_T0022725.1 MGP_LPJ_G0016539.1 mouse_genomes_project 1 162355632 162365521 - MGP_LPJ_P0022725 Tdrd5 protein_coding protein_coding MGP_LPJ_T0019234.1 MGP_LPJ_G0015837.1 mouse_genomes_project 1 35314363 35334165 - MGP_LPJ_P0019234 Lman2l protein_coding protein_coding MGP_LPJ_T0019235.1 MGP_LPJ_G0015837.1 mouse_genomes_project 1 35316557 35339768 - MGP_LPJ_P0019235 Lman2l protein_coding protein_coding MGP_LPJ_T0019236.1 MGP_LPJ_G0015837.1 mouse_genomes_project 1 35317678 35336369 - Lman2l protein_coding retained_intron MGP_LPJ_T0019237.1 MGP_LPJ_G0015837.1 mouse_genomes_project 1 35317678 35339768 - MGP_LPJ_P0019237 Lman2l protein_coding nonsense_mediated_decay MGP_LPJ_T0019238.1 MGP_LPJ_G0015837.1 mouse_genomes_project 1 35317678 35339768 - MGP_LPJ_P0019238 Lman2l protein_coding protein_coding MGP_LPJ_T0019239.1 MGP_LPJ_G0015837.1 mouse_genomes_project 1 35318998 35322859 - MGP_LPJ_P0019239 Lman2l protein_coding protein_coding MGP_LPJ_T0019240.1 MGP_LPJ_G0015837.1 mouse_genomes_project 1 35322884 35339768 - MGP_LPJ_P0019240 Lman2l protein_coding nonsense_mediated_decay MGP_LPJ_T0019241.1 MGP_LPJ_G0015837.1 mouse_genomes_project 1 35338241 35339754 - Lman2l protein_coding retained_intron MGP_LPJ_T0009535.1 MGP_LPJ_G0007653.1 mouse_genomes_project 1 96142746 96142810 + Mir6902 miRNA miRNA MGP_LPJ_T0019286.1 MGP_LPJ_G0015847.1 mouse_genomes_project 1 35723257 35873048 - MGP_LPJ_P0019286 Tmem131 protein_coding protein_coding MGP_LPJ_T0019287.1 MGP_LPJ_G0015847.1 mouse_genomes_project 1 35723260 35873343 - MGP_LPJ_P0019287 Tmem131 protein_coding protein_coding MGP_LPJ_T0019288.1 MGP_LPJ_G0015847.1 mouse_genomes_project 1 35732006 35749543 - Tmem131 protein_coding retained_intron MGP_LPJ_T0019289.1 MGP_LPJ_G0015847.1 mouse_genomes_project 1 35740359 35742357 - Tmem131 protein_coding retained_intron MGP_LPJ_T0019290.1 MGP_LPJ_G0015847.1 mouse_genomes_project 1 35745985 35751718 - MGP_LPJ_P0019290 Tmem131 protein_coding protein_coding MGP_LPJ_T0019291.1 MGP_LPJ_G0015847.1 mouse_genomes_project 1 35748876 35752109 - MGP_LPJ_P0019291 Tmem131 protein_coding protein_coding MGP_LPJ_T0019292.1 MGP_LPJ_G0015847.1 mouse_genomes_project 1 35751616 35757710 - MGP_LPJ_P0019292 Tmem131 protein_coding nonsense_mediated_decay MGP_LPJ_T0019293.1 MGP_LPJ_G0015847.1 mouse_genomes_project 1 35774619 35877187 - MGP_LPJ_P0019293 Tmem131 protein_coding protein_coding MGP_LPJ_T0002801.1 MGP_LPJ_G0002661.1 mouse_genomes_project 1 34975149 34976212 - Gm37335 antisense antisense MGP_LPJ_T0022242.1 MGP_LPJ_G0016446.1 mouse_genomes_project 1 140782815 140785833 + MGP_LPJ_P0022242 Phlda3 protein_coding protein_coding MGP_LPJ_T0022243.1 MGP_LPJ_G0016446.1 mouse_genomes_project 1 140783830 140785619 + Phlda3 protein_coding processed_transcript MGP_LPJ_T0020622.1 MGP_LPJ_G0016098.1 mouse_genomes_project 1 76962891 76969072 - MGP_LPJ_P0020622 Resp18 protein_coding protein_coding MGP_LPJ_T0020623.1 MGP_LPJ_G0016098.1 mouse_genomes_project 1 76962893 76964956 - Resp18 protein_coding retained_intron MGP_LPJ_T0020624.1 MGP_LPJ_G0016098.1 mouse_genomes_project 1 76963003 76968973 - MGP_LPJ_P0020624 Resp18 protein_coding nonsense_mediated_decay MGP_LPJ_T0020625.1 MGP_LPJ_G0016098.1 mouse_genomes_project 1 76964762 76968941 - Resp18 protein_coding retained_intron MGP_LPJ_T0021291.1 MGP_LPJ_G0016237.1 mouse_genomes_project 1 95376017 95377015 + MGP_LPJ_P0021291 Olfr1411 protein_coding protein_coding MGP_LPJ_T0023584.1 MGP_LPJ_G0016731.1 mouse_genomes_project 1 180813819 181035305 - MGP_LPJ_P0023584 protein_coding protein_coding MGP_LPJ_T0023586.1 MGP_LPJ_G0016731.1 mouse_genomes_project 1 180989800 181035299 - protein_coding processed_transcript MGP_LPJ_T0000676.1 MGP_LPJ_G0000610.1 mouse_genomes_project 1 140526300 140528551 - TEC TEC MGP_LPJ_T0000843.1 MGP_LPJ_G0000773.1 mouse_genomes_project 1 203365381 203367678 + TEC TEC MGP_LPJ_T0020777.1 MGP_LPJ_G0016126.1 mouse_genomes_project 1 82221058 82299668 - MGP_LPJ_P0020777 Cul3 protein_coding protein_coding MGP_LPJ_T0020778.1 MGP_LPJ_G0016126.1 mouse_genomes_project 1 82222958 82299499 - MGP_LPJ_P0020778 Cul3 protein_coding protein_coding MGP_LPJ_T0020779.1 MGP_LPJ_G0016126.1 mouse_genomes_project 1 82223082 82233566 - MGP_LPJ_P0020779 Cul3 protein_coding protein_coding MGP_LPJ_T0020780.1 MGP_LPJ_G0016126.1 mouse_genomes_project 1 82223377 82232689 - Cul3 protein_coding retained_intron MGP_LPJ_T0020781.1 MGP_LPJ_G0016126.1 mouse_genomes_project 1 82243175 82299495 - MGP_LPJ_P0020781 Cul3 protein_coding nonsense_mediated_decay MGP_LPJ_T0020782.1 MGP_LPJ_G0016126.1 mouse_genomes_project 1 82244951 82299467 - MGP_LPJ_P0020782 Cul3 protein_coding nonsense_mediated_decay MGP_LPJ_T0020695.1 MGP_LPJ_G0016107.1 mouse_genomes_project 1 77214220 77217509 + MGP_LPJ_P0020695 Inha protein_coding protein_coding MGP_LPJ_T0101694.1 MGP_LPJ_G0039732.1 mouse_genomes_project 1 90591933 90592331 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0022998.1 MGP_LPJ_G0016584.1 mouse_genomes_project 1 169337766 169362243 - MGP_LPJ_P0022998 Fmo2 protein_coding protein_coding MGP_LPJ_T0022999.1 MGP_LPJ_G0016584.1 mouse_genomes_project 1 169337771 169349873 - Fmo2 protein_coding retained_intron MGP_LPJ_T0023000.1 MGP_LPJ_G0016584.1 mouse_genomes_project 1 169339885 169362196 - MGP_LPJ_P0023000 Fmo2 protein_coding protein_coding MGP_LPJ_T0023001.1 MGP_LPJ_G0016584.1 mouse_genomes_project 1 169341488 169344157 - Fmo2 protein_coding processed_transcript MGP_LPJ_T0023002.1 MGP_LPJ_G0016584.1 mouse_genomes_project 1 169350925 169362015 - MGP_LPJ_P0023002 Fmo2 protein_coding protein_coding MGP_LPJ_T0023003.1 MGP_LPJ_G0016584.1 mouse_genomes_project 1 169351435 169362257 - Fmo2 protein_coding retained_intron MGP_LPJ_T0023004.1 MGP_LPJ_G0016584.1 mouse_genomes_project 1 169361211 169362251 - Fmo2 protein_coding retained_intron MGP_LPJ_T0012222.1 MGP_LPJ_G0010313.1 mouse_genomes_project 1 127042150 127042527 + processed_pseudogene processed_pseudogene MGP_LPJ_T0023424.1 MGP_LPJ_G0016683.1 mouse_genomes_project 1 178493893 178511511 - MGP_LPJ_P0023424 Ly9 protein_coding protein_coding MGP_LPJ_T0023425.1 MGP_LPJ_G0016683.1 mouse_genomes_project 1 178493902 178511459 - MGP_LPJ_P0023425 Ly9 protein_coding protein_coding MGP_LPJ_T0023426.1 MGP_LPJ_G0016683.1 mouse_genomes_project 1 178493918 178511435 - MGP_LPJ_P0023426 Ly9 protein_coding nonsense_mediated_decay MGP_LPJ_T0023427.1 MGP_LPJ_G0016683.1 mouse_genomes_project 1 178495970 178511430 - MGP_LPJ_P0023427 Ly9 protein_coding protein_coding MGP_LPJ_T0023428.1 MGP_LPJ_G0016683.1 mouse_genomes_project 1 178504991 178511461 - Ly9 protein_coding retained_intron MGP_LPJ_T0022586.1 MGP_LPJ_G0016513.1 mouse_genomes_project 1 159140342 159262238 - MGP_LPJ_P0022586 Lamc1 protein_coding protein_coding MGP_LPJ_T0022587.1 MGP_LPJ_G0016513.1 mouse_genomes_project 1 159140342 159150515 - MGP_LPJ_P0022587 Lamc1 protein_coding protein_coding MGP_LPJ_T0022588.1 MGP_LPJ_G0016513.1 mouse_genomes_project 1 159150131 159150789 - Lamc1 protein_coding retained_intron MGP_LPJ_T0022589.1 MGP_LPJ_G0016513.1 mouse_genomes_project 1 159150185 159160710 - MGP_LPJ_P0022589 Lamc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0022590.1 MGP_LPJ_G0016513.1 mouse_genomes_project 1 159170002 159171846 - Lamc1 protein_coding retained_intron MGP_LPJ_T0101237.1 MGP_LPJ_G0039488.1 mouse_genomes_project 1 193376804 193387579 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101238.1 MGP_LPJ_G0039488.1 mouse_genomes_project 1 193386801 193387438 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0009513.1 MGP_LPJ_G0007631.1 mouse_genomes_project 1 65464864 65464933 + Gm25748 miRNA miRNA MGP_LPJ_T0023048.1 MGP_LPJ_G0016598.1 mouse_genomes_project 1 170649160 170743212 + MGP_LPJ_P0023048 F5 protein_coding protein_coding MGP_LPJ_T0023028.1 MGP_LPJ_G0016593.1 mouse_genomes_project 1 170435636 170487055 - MGP_LPJ_P0023028 BC055324 protein_coding protein_coding MGP_LPJ_T0023030.1 MGP_LPJ_G0016593.1 mouse_genomes_project 1 170443397 170487055 - MGP_LPJ_P0023030 BC055324 protein_coding protein_coding MGP_LPJ_T0023031.1 MGP_LPJ_G0016593.1 mouse_genomes_project 1 170443918 170451381 - MGP_LPJ_P0023031 BC055324 protein_coding nonsense_mediated_decay MGP_LPJ_T0023032.1 MGP_LPJ_G0016593.1 mouse_genomes_project 1 170457494 170462702 - BC055324 protein_coding retained_intron MGP_LPJ_T0023033.1 MGP_LPJ_G0016593.1 mouse_genomes_project 1 170478220 170487023 - MGP_LPJ_P0023033 BC055324 protein_coding nonsense_mediated_decay MGP_LPJ_T0023034.1 MGP_LPJ_G0016593.1 mouse_genomes_project 1 170481068 170486800 - BC055324 protein_coding processed_transcript MGP_LPJ_T0012060.1 MGP_LPJ_G0010151.1 mouse_genomes_project 1 61744863 61746206 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005894.1 MGP_LPJ_G0004944.1 mouse_genomes_project 1 123131439 123132814 + Gm26831 lincRNA lincRNA MGP_LPJ_T0012299.1 MGP_LPJ_G0010390.1 mouse_genomes_project 1 163783782 163783980 + processed_pseudogene processed_pseudogene MGP_LPJ_T0023915.1 MGP_LPJ_G0016811.1 mouse_genomes_project 1 190291342 190341645 - MGP_LPJ_P0023915 Capn2 protein_coding protein_coding MGP_LPJ_T0023916.1 MGP_LPJ_G0016811.1 mouse_genomes_project 1 190294296 190303890 - Capn2 protein_coding retained_intron MGP_LPJ_T0023917.1 MGP_LPJ_G0016811.1 mouse_genomes_project 1 190296621 190305577 - Capn2 protein_coding retained_intron MGP_LPJ_T0023918.1 MGP_LPJ_G0016811.1 mouse_genomes_project 1 190307952 190317099 - Capn2 protein_coding retained_intron MGP_LPJ_T0023919.1 MGP_LPJ_G0016811.1 mouse_genomes_project 1 190307957 190341729 - Capn2 protein_coding retained_intron MGP_LPJ_T0101699.1 MGP_LPJ_G0039737.1 mouse_genomes_project 1 90666176 90667034 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0000760.1 MGP_LPJ_G0000693.1 mouse_genomes_project 1 169783406 169785680 - TEC TEC MGP_LPJ_T0000559.1 MGP_LPJ_G0000494.1 mouse_genomes_project 1 80325781 80327260 - TEC TEC MGP_LPJ_T0019036.1 MGP_LPJ_G0015802.1 mouse_genomes_project 1 22041794 22057320 - MGP_LPJ_P0019036 Fam135a protein_coding protein_coding MGP_LPJ_T0019037.1 MGP_LPJ_G0015802.1 mouse_genomes_project 1 22041794 22112329 - MGP_LPJ_P0019037 Fam135a protein_coding nonsense_mediated_decay MGP_LPJ_T0019038.1 MGP_LPJ_G0015802.1 mouse_genomes_project 1 22041946 22130688 - MGP_LPJ_P0019038 Fam135a protein_coding protein_coding MGP_LPJ_T0019039.1 MGP_LPJ_G0015802.1 mouse_genomes_project 1 22042292 22130676 - MGP_LPJ_P0019039 Fam135a protein_coding protein_coding MGP_LPJ_T0019040.1 MGP_LPJ_G0015802.1 mouse_genomes_project 1 22042305 22059647 - MGP_LPJ_P0019040 Fam135a protein_coding nonsense_mediated_decay MGP_LPJ_T0019041.1 MGP_LPJ_G0015802.1 mouse_genomes_project 1 22042382 22130827 - MGP_LPJ_P0019041 Fam135a protein_coding protein_coding MGP_LPJ_T0019042.1 MGP_LPJ_G0015802.1 mouse_genomes_project 1 22054907 22059011 - MGP_LPJ_P0019042 Fam135a protein_coding protein_coding MGP_LPJ_T0019043.1 MGP_LPJ_G0015802.1 mouse_genomes_project 1 22059282 22130710 - MGP_LPJ_P0019043 Fam135a protein_coding protein_coding MGP_LPJ_T0019044.1 MGP_LPJ_G0015802.1 mouse_genomes_project 1 22083086 22130835 - Fam135a protein_coding retained_intron MGP_LPJ_T0000460.1 MGP_LPJ_G0000396.1 mouse_genomes_project 1 26863386 26864900 + TEC TEC MGP_LPJ_T0019869.1 MGP_LPJ_G0015963.1 mouse_genomes_project 1 59025812 59137677 + MGP_LPJ_P0019869 Aox2 protein_coding protein_coding MGP_LPJ_T0002897.1 MGP_LPJ_G0002733.1 mouse_genomes_project 1 123608711 123615819 - Gm27184 antisense antisense MGP_LPJ_T0000527.1 MGP_LPJ_G0000462.1 mouse_genomes_project 1 62633624 62636591 + TEC TEC MGP_LPJ_T0018700.1 MGP_LPJ_G0015735.1 mouse_genomes_project 1 3452082 3481937 + MGP_LPJ_P0018700 Rb1cc1 protein_coding protein_coding MGP_LPJ_T0018701.1 MGP_LPJ_G0015735.1 mouse_genomes_project 1 3452112 3486010 + MGP_LPJ_P0018701 Rb1cc1 protein_coding protein_coding MGP_LPJ_T0018702.1 MGP_LPJ_G0015735.1 mouse_genomes_project 1 3460548 3477625 + Rb1cc1 protein_coding retained_intron MGP_LPJ_T0018703.1 MGP_LPJ_G0015735.1 mouse_genomes_project 1 3460578 3537123 + MGP_LPJ_P0018703 Rb1cc1 protein_coding protein_coding MGP_LPJ_T0018704.1 MGP_LPJ_G0015735.1 mouse_genomes_project 1 3460893 3481636 + MGP_LPJ_P0018704 Rb1cc1 protein_coding protein_coding MGP_LPJ_T0018705.1 MGP_LPJ_G0015735.1 mouse_genomes_project 1 3474922 3508916 + MGP_LPJ_P0018705 Rb1cc1 protein_coding protein_coding MGP_LPJ_T0018706.1 MGP_LPJ_G0015735.1 mouse_genomes_project 1 3488595 3508245 + Rb1cc1 protein_coding retained_intron MGP_LPJ_T0018707.1 MGP_LPJ_G0015735.1 mouse_genomes_project 1 3508974 3537338 + MGP_LPJ_P0018707 Rb1cc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0018708.1 MGP_LPJ_G0015735.1 mouse_genomes_project 1 3509863 3511145 + Rb1cc1 protein_coding processed_transcript MGP_LPJ_T0018709.1 MGP_LPJ_G0015735.1 mouse_genomes_project 1 3509981 3528230 + Rb1cc1 protein_coding retained_intron MGP_LPJ_T0018710.1 MGP_LPJ_G0015735.1 mouse_genomes_project 1 3518385 3525274 + Rb1cc1 protein_coding retained_intron MGP_LPJ_T0018711.1 MGP_LPJ_G0015735.1 mouse_genomes_project 1 3525322 3527313 + Rb1cc1 protein_coding retained_intron MGP_LPJ_T0018712.1 MGP_LPJ_G0015735.1 mouse_genomes_project 1 3525352 3537337 + MGP_LPJ_P0018712 Rb1cc1 protein_coding protein_coding MGP_LPJ_T0018713.1 MGP_LPJ_G0015735.1 mouse_genomes_project 1 3528025 3535185 + Rb1cc1 protein_coding retained_intron MGP_LPJ_T0018714.1 MGP_LPJ_G0015735.1 mouse_genomes_project 1 3533097 3538423 + Rb1cc1 protein_coding retained_intron MGP_LPJ_T0012063.1 MGP_LPJ_G0010154.1 mouse_genomes_project 1 62039527 62040079 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002949.1 MGP_LPJ_G0002775.1 mouse_genomes_project 1 167381205 167381992 + Gm37634 antisense antisense MGP_LPJ_T0012300.1 MGP_LPJ_G0010391.1 mouse_genomes_project 1 163784471 163784626 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016994.1 MGP_LPJ_G0015034.1 mouse_genomes_project 1 167375337 167378442 + Gas5 processed_transcript retained_intron MGP_LPJ_T0016995.1 MGP_LPJ_G0015034.1 mouse_genomes_project 1 167375520 167379455 + Gas5 processed_transcript lincRNA MGP_LPJ_T0016996.1 MGP_LPJ_G0015034.1 mouse_genomes_project 1 167375842 167379451 + Gas5 processed_transcript lincRNA MGP_LPJ_T0016997.1 MGP_LPJ_G0015034.1 mouse_genomes_project 1 167375980 167379453 + Gas5 processed_transcript lincRNA MGP_LPJ_T0016998.1 MGP_LPJ_G0015034.1 mouse_genomes_project 1 167376076 167378457 + Gas5 processed_transcript retained_intron MGP_LPJ_T0016999.1 MGP_LPJ_G0015034.1 mouse_genomes_project 1 167376076 167379449 + Gas5 processed_transcript retained_intron MGP_LPJ_T0017000.1 MGP_LPJ_G0015034.1 mouse_genomes_project 1 167376076 167379453 + Gas5 processed_transcript lincRNA MGP_LPJ_T0017001.1 MGP_LPJ_G0015034.1 mouse_genomes_project 1 167376079 167379455 + Gas5 processed_transcript retained_intron MGP_LPJ_T0017002.1 MGP_LPJ_G0015034.1 mouse_genomes_project 1 167376079 167377966 + Gas5 processed_transcript retained_intron MGP_LPJ_T0017003.1 MGP_LPJ_G0015034.1 mouse_genomes_project 1 167376079 167379450 + Gas5 processed_transcript retained_intron MGP_LPJ_T0017004.1 MGP_LPJ_G0015034.1 mouse_genomes_project 1 167376079 167379455 + Gas5 processed_transcript lincRNA MGP_LPJ_T0017005.1 MGP_LPJ_G0015034.1 mouse_genomes_project 1 167376080 167379159 + Gas5 processed_transcript retained_intron MGP_LPJ_T0017006.1 MGP_LPJ_G0015034.1 mouse_genomes_project 1 167376081 167378471 + Gas5 processed_transcript retained_intron MGP_LPJ_T0017007.1 MGP_LPJ_G0015034.1 mouse_genomes_project 1 167376085 167377537 + Gas5 processed_transcript retained_intron MGP_LPJ_T0017008.1 MGP_LPJ_G0015034.1 mouse_genomes_project 1 167376091 167379455 + Gas5 processed_transcript retained_intron MGP_LPJ_T0017009.1 MGP_LPJ_G0015034.1 mouse_genomes_project 1 167376097 167379455 + Gas5 processed_transcript retained_intron MGP_LPJ_T0017010.1 MGP_LPJ_G0015034.1 mouse_genomes_project 1 167376099 167379391 + Gas5 processed_transcript retained_intron MGP_LPJ_T0017011.1 MGP_LPJ_G0015034.1 mouse_genomes_project 1 167376101 167379455 + Gas5 processed_transcript retained_intron MGP_LPJ_T0017012.1 MGP_LPJ_G0015034.1 mouse_genomes_project 1 167376932 167377798 + Gas5 processed_transcript retained_intron MGP_LPJ_T0017013.1 MGP_LPJ_G0015034.1 mouse_genomes_project 1 167377604 167379455 + Gas5 processed_transcript retained_intron MGP_LPJ_T0017014.1 MGP_LPJ_G0015034.1 mouse_genomes_project 1 167378199 167379448 + Gas5 processed_transcript retained_intron MGP_LPJ_T0017015.1 MGP_LPJ_G0015034.1 mouse_genomes_project 1 167378220 167379038 + Gas5 processed_transcript retained_intron MGP_LPJ_T0017016.1 MGP_LPJ_G0015034.1 mouse_genomes_project 1 167378260 167379451 + Gas5 processed_transcript retained_intron MGP_LPJ_T0017017.1 MGP_LPJ_G0015034.1 mouse_genomes_project 1 167378630 167379453 + Gas5 processed_transcript retained_intron MGP_LPJ_T0017018.1 MGP_LPJ_G0015034.1 mouse_genomes_project 1 167378692 167379455 + Gas5 processed_transcript retained_intron MGP_LPJ_T0020144.1 MGP_LPJ_G0016009.1 mouse_genomes_project 1 65097777 65197627 - MGP_LPJ_P0020144 Klf7 protein_coding protein_coding MGP_LPJ_T0020145.1 MGP_LPJ_G0016009.1 mouse_genomes_project 1 65112891 65197618 - MGP_LPJ_P0020145 Klf7 protein_coding protein_coding MGP_LPJ_T0020146.1 MGP_LPJ_G0016009.1 mouse_genomes_project 1 65151837 65198582 - MGP_LPJ_P0020146 Klf7 protein_coding protein_coding MGP_LPJ_T0002934.1 MGP_LPJ_G0002762.1 mouse_genomes_project 1 157115519 157119974 - Gm10138 antisense antisense MGP_LPJ_T0002935.1 MGP_LPJ_G0002762.1 mouse_genomes_project 1 157118623 157121123 - Gm10138 antisense antisense MGP_LPJ_T0002936.1 MGP_LPJ_G0002762.1 mouse_genomes_project 1 157120260 157120628 - Gm10138 antisense pseudogene MGP_LPJ_T0006039.1 MGP_LPJ_G0005058.1 mouse_genomes_project 1 190838070 190838224 + Gm38079 lincRNA lincRNA MGP_LPJ_T0022779.1 MGP_LPJ_G0016548.1 mouse_genomes_project 1 163233670 163243148 - MGP_LPJ_P0022779 Tex35 protein_coding protein_coding MGP_LPJ_T0022780.1 MGP_LPJ_G0016548.1 mouse_genomes_project 1 163233670 163243148 - MGP_LPJ_P0022780 Tex35 protein_coding protein_coding MGP_LPJ_T0022781.1 MGP_LPJ_G0016548.1 mouse_genomes_project 1 163233678 163243147 - MGP_LPJ_P0022781 Tex35 protein_coding protein_coding MGP_LPJ_T0022782.1 MGP_LPJ_G0016548.1 mouse_genomes_project 1 163233685 163243178 - MGP_LPJ_P0022782 Tex35 protein_coding protein_coding MGP_LPJ_T0022783.1 MGP_LPJ_G0016548.1 mouse_genomes_project 1 163233844 163242886 - MGP_LPJ_P0022783 Tex35 protein_coding protein_coding MGP_LPJ_T0022784.1 MGP_LPJ_G0016548.1 mouse_genomes_project 1 163233846 163243143 - MGP_LPJ_P0022784 Tex35 protein_coding nonsense_mediated_decay MGP_LPJ_T0019282.1 MGP_LPJ_G0015846.1 mouse_genomes_project 1 35693937 35713711 + MGP_LPJ_P0019282 protein_coding unknown_likely_coding MGP_LPJ_T0019283.1 MGP_LPJ_G0015846.1 mouse_genomes_project 1 35696310 35700440 + MGP_LPJ_P0019283 protein_coding protein_coding MGP_LPJ_T0019284.1 MGP_LPJ_G0015846.1 mouse_genomes_project 1 35700364 35701748 + protein_coding retained_intron MGP_LPJ_T0019285.1 MGP_LPJ_G0015846.1 mouse_genomes_project 1 35710053 35713942 + protein_coding retained_intron MGP_LPJ_T0002965.1 MGP_LPJ_G0002786.1 mouse_genomes_project 1 172913510 172916355 - 5330438I03Rik antisense antisense MGP_LPJ_T0020489.1 MGP_LPJ_G0016075.1 mouse_genomes_project 1 76435104 76462561 + MGP_LPJ_P0020489 Cyp27a1 protein_coding protein_coding MGP_LPJ_T0020490.1 MGP_LPJ_G0016075.1 mouse_genomes_project 1 76460019 76461385 + Cyp27a1 protein_coding retained_intron MGP_LPJ_T0020491.1 MGP_LPJ_G0016075.1 mouse_genomes_project 1 76461477 76462492 + Cyp27a1 protein_coding retained_intron MGP_LPJ_T0019127.1 MGP_LPJ_G0015819.1 mouse_genomes_project 1 32569777 32625362 - MGP_LPJ_P0019127 Bend6 protein_coding protein_coding MGP_LPJ_T0019128.1 MGP_LPJ_G0015819.1 mouse_genomes_project 1 32569777 32625321 - MGP_LPJ_P0019128 Bend6 protein_coding protein_coding MGP_LPJ_T0019129.1 MGP_LPJ_G0015819.1 mouse_genomes_project 1 32580343 32601177 - Bend6 protein_coding processed_transcript MGP_LPJ_T0019130.1 MGP_LPJ_G0015819.1 mouse_genomes_project 1 32580804 32601776 - Bend6 protein_coding retained_intron MGP_LPJ_T0019131.1 MGP_LPJ_G0015819.1 mouse_genomes_project 1 32591441 32601187 - Bend6 protein_coding processed_transcript MGP_LPJ_T0023625.1 MGP_LPJ_G0016753.1 mouse_genomes_project 1 182895494 182920600 - MGP_LPJ_P0023625 Fh1 protein_coding protein_coding MGP_LPJ_T0023626.1 MGP_LPJ_G0016753.1 mouse_genomes_project 1 182896496 182899402 - Fh1 protein_coding retained_intron MGP_LPJ_T0023627.1 MGP_LPJ_G0016753.1 mouse_genomes_project 1 182896498 182901764 - Fh1 protein_coding retained_intron MGP_LPJ_T0023628.1 MGP_LPJ_G0016753.1 mouse_genomes_project 1 182896504 182904819 - MGP_LPJ_P0023628 Fh1 protein_coding protein_coding MGP_LPJ_T0023629.1 MGP_LPJ_G0016753.1 mouse_genomes_project 1 182909742 182920538 - MGP_LPJ_P0023629 Fh1 protein_coding nonsense_mediated_decay MGP_LPJ_T0011994.1 MGP_LPJ_G0010085.1 mouse_genomes_project 1 43257093 43257909 + processed_pseudogene processed_pseudogene MGP_LPJ_T0018967.1 MGP_LPJ_G0015782.1 mouse_genomes_project 1 16904335 16984305 + MGP_LPJ_P0018967 Tfap2d protein_coding protein_coding MGP_LPJ_T0018968.1 MGP_LPJ_G0015782.1 mouse_genomes_project 1 16908493 16966129 + Tfap2d protein_coding processed_transcript MGP_LPJ_T0023471.1 MGP_LPJ_G0016694.1 mouse_genomes_project 1 179066607 179078820 + MGP_LPJ_P0023471 Pex19 protein_coding protein_coding MGP_LPJ_T0023472.1 MGP_LPJ_G0016694.1 mouse_genomes_project 1 179066608 179070850 + Pex19 protein_coding retained_intron MGP_LPJ_T0023473.1 MGP_LPJ_G0016694.1 mouse_genomes_project 1 179066614 179080695 + MGP_LPJ_P0023473 Pex19 protein_coding protein_coding MGP_LPJ_T0023474.1 MGP_LPJ_G0016694.1 mouse_genomes_project 1 179066625 179070016 + Pex19 protein_coding retained_intron MGP_LPJ_T0023475.1 MGP_LPJ_G0016694.1 mouse_genomes_project 1 179066625 179068743 + Pex19 protein_coding retained_intron MGP_LPJ_T0023476.1 MGP_LPJ_G0016694.1 mouse_genomes_project 1 179077492 179078237 + Pex19 protein_coding retained_intron MGP_LPJ_T0005896.1 MGP_LPJ_G0004946.1 mouse_genomes_project 1 123410767 123420144 + Gm29455 lincRNA lincRNA MGP_LPJ_T0005897.1 MGP_LPJ_G0004946.1 mouse_genomes_project 1 123410809 123466341 + Gm29455 lincRNA lincRNA MGP_LPJ_T0005951.1 MGP_LPJ_G0004989.1 mouse_genomes_project 1 144534534 144562687 + 4933436E23Rik lincRNA lincRNA MGP_LPJ_T0000585.1 MGP_LPJ_G0000520.1 mouse_genomes_project 1 89225438 89229558 + TEC TEC MGP_LPJ_T0020186.1 MGP_LPJ_G0016020.1 mouse_genomes_project 1 66196555 66198929 - Cryga protein_coding retained_intron MGP_LPJ_T0020187.1 MGP_LPJ_G0016020.1 mouse_genomes_project 1 66196555 66198942 - MGP_LPJ_P0020187 Cryga protein_coding protein_coding MGP_LPJ_T0022458.1 MGP_LPJ_G0016491.1 mouse_genomes_project 1 155742552 155750692 + MGP_LPJ_P0022458 Ptgs2 protein_coding protein_coding MGP_LPJ_T0022459.1 MGP_LPJ_G0016491.1 mouse_genomes_project 1 155742853 155743848 + MGP_LPJ_P0022459 Ptgs2 protein_coding protein_coding MGP_LPJ_T0018872.1 MGP_LPJ_G0015758.1 mouse_genomes_project 1 11119669 11152628 - MGP_LPJ_P0018872 Tram1 protein_coding protein_coding MGP_LPJ_T0018873.1 MGP_LPJ_G0015758.1 mouse_genomes_project 1 11133476 11137129 - Tram1 protein_coding retained_intron MGP_LPJ_T0018874.1 MGP_LPJ_G0015758.1 mouse_genomes_project 1 11135450 11152597 - MGP_LPJ_P0018874 Tram1 protein_coding nonsense_mediated_decay MGP_LPJ_T0022816.1 MGP_LPJ_G0016554.1 mouse_genomes_project 1 164916306 165182953 - MGP_LPJ_P0022816 Pappa2 protein_coding protein_coding MGP_LPJ_T0022817.1 MGP_LPJ_G0016554.1 mouse_genomes_project 1 164975588 165025040 - MGP_LPJ_P0022817 Pappa2 protein_coding protein_coding MGP_LPJ_T0022818.1 MGP_LPJ_G0016554.1 mouse_genomes_project 1 165024844 165059358 - Pappa2 protein_coding retained_intron MGP_LPJ_T0022819.1 MGP_LPJ_G0016554.1 mouse_genomes_project 1 165043802 165053696 - Pappa2 protein_coding processed_transcript MGP_LPJ_T0022820.1 MGP_LPJ_G0016554.1 mouse_genomes_project 1 165182661 165184965 - Pappa2 protein_coding processed_transcript MGP_LPJ_T0022821.1 MGP_LPJ_G0016554.1 mouse_genomes_project 1 165182712 165205070 - Pappa2 protein_coding processed_transcript MGP_LPJ_T0018899.1 MGP_LPJ_G0015767.1 mouse_genomes_project 1 13745246 13758181 - MGP_LPJ_P0018899 4930444P10Rik protein_coding protein_coding MGP_LPJ_T0018900.1 MGP_LPJ_G0015767.1 mouse_genomes_project 1 13745246 13773260 - MGP_LPJ_P0018900 4930444P10Rik protein_coding protein_coding MGP_LPJ_T0018901.1 MGP_LPJ_G0015767.1 mouse_genomes_project 1 13745246 13773260 - MGP_LPJ_P0018901 4930444P10Rik protein_coding protein_coding MGP_LPJ_T0005875.1 MGP_LPJ_G0004929.1 mouse_genomes_project 1 101246650 101265167 + Gm29461 lincRNA lincRNA MGP_LPJ_T0005748.1 MGP_LPJ_G0004828.1 mouse_genomes_project 1 51150392 51152920 + Gm29325 lincRNA lincRNA MGP_LPJ_T0098096.1 MGP_LPJ_G0036377.1 mouse_genomes_project 1 160327130 160327250 - n-R5s220 rRNA rRNA MGP_LPJ_T0012026.1 MGP_LPJ_G0010117.1 mouse_genomes_project 1 49937846 49939643 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012043.1 MGP_LPJ_G0010134.1 mouse_genomes_project 1 55713368 55713675 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009561.1 MGP_LPJ_G0007679.1 mouse_genomes_project 1 168660852 168660962 + Mir214 miRNA miRNA MGP_LPJ_T0005886.1 MGP_LPJ_G0004938.1 mouse_genomes_project 1 111232788 111239034 + Gm15389 lincRNA lincRNA MGP_LPJ_T0020108.1 MGP_LPJ_G0016001.1 mouse_genomes_project 1 64204245 64207907 + MGP_LPJ_P0020108 Eef1b2 protein_coding protein_coding MGP_LPJ_T0020109.1 MGP_LPJ_G0016001.1 mouse_genomes_project 1 64204549 64206783 + MGP_LPJ_P0020109 Eef1b2 protein_coding nonsense_mediated_decay MGP_LPJ_T0020110.1 MGP_LPJ_G0016001.1 mouse_genomes_project 1 64204550 64207077 + MGP_LPJ_P0020110 Eef1b2 protein_coding protein_coding MGP_LPJ_T0020111.1 MGP_LPJ_G0016001.1 mouse_genomes_project 1 64204551 64205930 + Eef1b2 protein_coding processed_transcript MGP_LPJ_T0020112.1 MGP_LPJ_G0016001.1 mouse_genomes_project 1 64204565 64207043 + MGP_LPJ_P0020112 Eef1b2 protein_coding nonsense_mediated_decay MGP_LPJ_T0020113.1 MGP_LPJ_G0016001.1 mouse_genomes_project 1 64204565 64206989 + MGP_LPJ_P0020113 Eef1b2 protein_coding nonsense_mediated_decay MGP_LPJ_T0020114.1 MGP_LPJ_G0016001.1 mouse_genomes_project 1 64204567 64205844 + Eef1b2 protein_coding processed_transcript MGP_LPJ_T0020115.1 MGP_LPJ_G0016001.1 mouse_genomes_project 1 64204605 64206300 + MGP_LPJ_P0020115 Eef1b2 protein_coding nonsense_mediated_decay MGP_LPJ_T0020116.1 MGP_LPJ_G0016001.1 mouse_genomes_project 1 64204643 64206319 + MGP_LPJ_P0020116 Eef1b2 protein_coding nonsense_mediated_decay MGP_LPJ_T0002980.1 MGP_LPJ_G0002799.1 mouse_genomes_project 1 184260875 184265585 - Gm15423 antisense antisense MGP_LPJ_T0023156.1 MGP_LPJ_G0016620.1 mouse_genomes_project 1 172803321 172843285 - MGP_LPJ_P0023156 Mael protein_coding protein_coding MGP_LPJ_T0023157.1 MGP_LPJ_G0016620.1 mouse_genomes_project 1 172803505 172843282 - MGP_LPJ_P0023157 Mael protein_coding protein_coding MGP_LPJ_T0017023.1 MGP_LPJ_G0015037.1 mouse_genomes_project 1 176676364 176677885 - Gm15852 processed_transcript processed_transcript MGP_LPJ_T0012247.1 MGP_LPJ_G0010338.1 mouse_genomes_project 1 141553201 141553573 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009546.1 MGP_LPJ_G0007664.1 mouse_genomes_project 1 136974967 136975064 + Mir135b miRNA miRNA MGP_LPJ_T0022561.1 MGP_LPJ_G0016509.1 mouse_genomes_project 1 158687539 158728967 + MGP_LPJ_P0022561 Ncf2 protein_coding protein_coding MGP_LPJ_T0022562.1 MGP_LPJ_G0016509.1 mouse_genomes_project 1 158697165 158716200 + MGP_LPJ_P0022562 Ncf2 protein_coding protein_coding MGP_LPJ_T0022563.1 MGP_LPJ_G0016509.1 mouse_genomes_project 1 158697218 158728966 + MGP_LPJ_P0022563 Ncf2 protein_coding protein_coding MGP_LPJ_T0022564.1 MGP_LPJ_G0016509.1 mouse_genomes_project 1 158697306 158701879 + Ncf2 protein_coding retained_intron MGP_LPJ_T0022565.1 MGP_LPJ_G0016509.1 mouse_genomes_project 1 158697360 158728090 + MGP_LPJ_P0022565 Ncf2 protein_coding unknown_likely_coding MGP_LPJ_T0022566.1 MGP_LPJ_G0016509.1 mouse_genomes_project 1 158700052 158716199 + Ncf2 protein_coding retained_intron MGP_LPJ_T0022567.1 MGP_LPJ_G0016509.1 mouse_genomes_project 1 158715476 158716392 + Ncf2 protein_coding retained_intron MGP_LPJ_T0021283.1 MGP_LPJ_G0016232.1 mouse_genomes_project 1 95241597 95276319 - MGP_LPJ_P0021283 Olfr1414 protein_coding protein_coding MGP_LPJ_T0011945.1 MGP_LPJ_G0010036.1 mouse_genomes_project 1 26231731 26233604 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021644.1 MGP_LPJ_G0016314.1 mouse_genomes_project 1 123559257 123593585 - MGP_LPJ_P0021644 Ralb protein_coding protein_coding MGP_LPJ_T0021645.1 MGP_LPJ_G0016314.1 mouse_genomes_project 1 123561096 123567017 - MGP_LPJ_P0021645 Ralb protein_coding protein_coding MGP_LPJ_T0021646.1 MGP_LPJ_G0016314.1 mouse_genomes_project 1 123570070 123593585 - Ralb protein_coding retained_intron MGP_LPJ_T0005792.1 MGP_LPJ_G0004862.1 mouse_genomes_project 1 69363715 69365237 + Gm15671 lincRNA lincRNA MGP_LPJ_T0024148.1 MGP_LPJ_G0016860.1 mouse_genomes_project 1 199572297 199617355 - MGP_LPJ_P0024148 Ppp2r5a protein_coding protein_coding MGP_LPJ_T0024149.1 MGP_LPJ_G0016860.1 mouse_genomes_project 1 199575143 199576804 - Ppp2r5a protein_coding retained_intron MGP_LPJ_T0024150.1 MGP_LPJ_G0016860.1 mouse_genomes_project 1 199576672 199607181 - Ppp2r5a protein_coding processed_transcript MGP_LPJ_T0024151.1 MGP_LPJ_G0016860.1 mouse_genomes_project 1 199577298 199589080 - MGP_LPJ_P0024151 Ppp2r5a protein_coding nonsense_mediated_decay MGP_LPJ_T0024152.1 MGP_LPJ_G0016860.1 mouse_genomes_project 1 199582040 199589069 - Ppp2r5a protein_coding retained_intron MGP_LPJ_T0024153.1 MGP_LPJ_G0016860.1 mouse_genomes_project 1 199593332 199619616 - Ppp2r5a protein_coding processed_transcript MGP_LPJ_T0024154.1 MGP_LPJ_G0016860.1 mouse_genomes_project 1 199618972 199623382 - Ppp2r5a protein_coding retained_intron MGP_LPJ_T0020020.1 MGP_LPJ_G0015988.1 mouse_genomes_project 1 61001199 61029412 - MGP_LPJ_P0020020 Wdr12 protein_coding protein_coding MGP_LPJ_T0020021.1 MGP_LPJ_G0015988.1 mouse_genomes_project 1 61007788 61030149 - MGP_LPJ_P0020021 Wdr12 protein_coding protein_coding MGP_LPJ_T0020022.1 MGP_LPJ_G0015988.1 mouse_genomes_project 1 61007788 61029650 - MGP_LPJ_P0020022 Wdr12 protein_coding protein_coding MGP_LPJ_T0020023.1 MGP_LPJ_G0015988.1 mouse_genomes_project 1 61014044 61016722 - Wdr12 protein_coding retained_intron MGP_LPJ_T0020024.1 MGP_LPJ_G0015988.1 mouse_genomes_project 1 61014754 61016899 - Wdr12 protein_coding processed_transcript MGP_LPJ_T0020025.1 MGP_LPJ_G0015988.1 mouse_genomes_project 1 61019000 61029639 - MGP_LPJ_P0020025 Wdr12 protein_coding protein_coding MGP_LPJ_T0020026.1 MGP_LPJ_G0015988.1 mouse_genomes_project 1 61019000 61029629 - MGP_LPJ_P0020026 Wdr12 protein_coding protein_coding MGP_LPJ_T0020027.1 MGP_LPJ_G0015988.1 mouse_genomes_project 1 61024957 61029201 - Wdr12 protein_coding retained_intron MGP_LPJ_T0009507.1 MGP_LPJ_G0007625.1 mouse_genomes_project 1 61572923 61573029 - Gm23762 miRNA miRNA MGP_LPJ_T0020010.1 MGP_LPJ_G0015985.1 mouse_genomes_project 1 60655134 60775064 + MGP_LPJ_P0020010 Bmpr2 protein_coding protein_coding MGP_LPJ_T0020011.1 MGP_LPJ_G0015985.1 mouse_genomes_project 1 60754824 60759543 + Bmpr2 protein_coding retained_intron MGP_LPJ_T0019070.1 MGP_LPJ_G0015809.1 mouse_genomes_project 1 29291020 29360518 - MGP_LPJ_P0019070 Phf3 protein_coding protein_coding MGP_LPJ_T0019071.1 MGP_LPJ_G0015809.1 mouse_genomes_project 1 29291023 29347710 - MGP_LPJ_P0019071 Phf3 protein_coding protein_coding MGP_LPJ_T0019072.1 MGP_LPJ_G0015809.1 mouse_genomes_project 1 29292227 29299991 - MGP_LPJ_P0019072 Phf3 protein_coding protein_coding MGP_LPJ_T0019073.1 MGP_LPJ_G0015809.1 mouse_genomes_project 1 29294910 29298386 - Phf3 protein_coding retained_intron MGP_LPJ_T0019074.1 MGP_LPJ_G0015809.1 mouse_genomes_project 1 29301182 29302814 - Phf3 protein_coding retained_intron MGP_LPJ_T0019075.1 MGP_LPJ_G0015809.1 mouse_genomes_project 1 29302849 29360628 - Phf3 protein_coding retained_intron MGP_LPJ_T0019076.1 MGP_LPJ_G0015809.1 mouse_genomes_project 1 29304593 29360854 - Phf3 protein_coding retained_intron MGP_LPJ_T0019077.1 MGP_LPJ_G0015809.1 mouse_genomes_project 1 29309516 29360737 - MGP_LPJ_P0019077 Phf3 protein_coding nonsense_mediated_decay MGP_LPJ_T0019078.1 MGP_LPJ_G0015809.1 mouse_genomes_project 1 29310348 29313138 - Phf3 protein_coding retained_intron MGP_LPJ_T0019079.1 MGP_LPJ_G0015809.1 mouse_genomes_project 1 29313710 29347524 - Phf3 protein_coding processed_transcript MGP_LPJ_T0019080.1 MGP_LPJ_G0015809.1 mouse_genomes_project 1 29318719 29320032 - Phf3 protein_coding retained_intron MGP_LPJ_T0019081.1 MGP_LPJ_G0015809.1 mouse_genomes_project 1 29320493 29360827 - MGP_LPJ_P0019081 Phf3 protein_coding protein_coding MGP_LPJ_T0019082.1 MGP_LPJ_G0015809.1 mouse_genomes_project 1 29347523 29360185 - MGP_LPJ_P0019082 Phf3 protein_coding protein_coding MGP_LPJ_T0019083.1 MGP_LPJ_G0015809.1 mouse_genomes_project 1 29359585 29360408 - Phf3 protein_coding retained_intron MGP_LPJ_T0023514.1 MGP_LPJ_G0016704.1 mouse_genomes_project 1 179429379 179432595 + MGP_LPJ_P0023514 Slamf9 protein_coding protein_coding MGP_LPJ_T0023830.1 MGP_LPJ_G0016792.1 mouse_genomes_project 1 188623471 188631258 + MGP_LPJ_P0023830 Lefty2 protein_coding protein_coding MGP_LPJ_T0023831.1 MGP_LPJ_G0016792.1 mouse_genomes_project 1 188626612 188629642 + Lefty2 protein_coding retained_intron MGP_LPJ_T0009501.1 MGP_LPJ_G0007619.1 mouse_genomes_project 1 42349283 42349368 + Gm24001 miRNA miRNA MGP_LPJ_T0012227.1 MGP_LPJ_G0010318.1 mouse_genomes_project 1 128075173 128076366 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098461.1 MGP_LPJ_G0036741.1 mouse_genomes_project 1 158775438 158777217 - Gm28791 sense_intronic sense_intronic MGP_LPJ_T0003021.1 MGP_LPJ_G0002830.1 mouse_genomes_project 1 200361064 200379288 + Gm10516 antisense antisense MGP_LPJ_T0003022.1 MGP_LPJ_G0002830.1 mouse_genomes_project 1 200361508 200370719 + Gm10516 antisense antisense MGP_LPJ_T0019172.1 MGP_LPJ_G0015826.1 mouse_genomes_project 1 33288156 33309221 - MGP_LPJ_P0019172 protein_coding nonsense_mediated_decay MGP_LPJ_T0006016.1 MGP_LPJ_G0005041.1 mouse_genomes_project 1 182868529 182872646 + Gm36307 lincRNA lincRNA MGP_LPJ_T0024038.1 MGP_LPJ_G0016839.1 mouse_genomes_project 1 195192202 195216776 + Gpatch2 protein_coding processed_transcript MGP_LPJ_T0024039.1 MGP_LPJ_G0016839.1 mouse_genomes_project 1 195192205 195335167 + MGP_LPJ_P0024039 Gpatch2 protein_coding nonsense_mediated_decay MGP_LPJ_T0024040.1 MGP_LPJ_G0016839.1 mouse_genomes_project 1 195192216 195337222 + MGP_LPJ_P0024040 Gpatch2 protein_coding protein_coding MGP_LPJ_T0024041.1 MGP_LPJ_G0016839.1 mouse_genomes_project 1 195192232 195286818 + Gpatch2 protein_coding retained_intron MGP_LPJ_T0024042.1 MGP_LPJ_G0016839.1 mouse_genomes_project 1 195192238 195215362 + MGP_LPJ_P0024042 Gpatch2 protein_coding protein_coding MGP_LPJ_T0024043.1 MGP_LPJ_G0016839.1 mouse_genomes_project 1 195192240 195214846 + MGP_LPJ_P0024043 Gpatch2 protein_coding nonsense_mediated_decay MGP_LPJ_T0024044.1 MGP_LPJ_G0016839.1 mouse_genomes_project 1 195192318 195337219 + MGP_LPJ_P0024044 Gpatch2 protein_coding protein_coding MGP_LPJ_T0024045.1 MGP_LPJ_G0016839.1 mouse_genomes_project 1 195192437 195336250 + MGP_LPJ_P0024045 Gpatch2 protein_coding protein_coding MGP_LPJ_T0020376.1 MGP_LPJ_G0016056.1 mouse_genomes_project 1 75831014 75838705 + MGP_LPJ_P0020376 Cxcr2 protein_coding protein_coding MGP_LPJ_T0003011.1 MGP_LPJ_G0002825.1 mouse_genomes_project 1 199275297 199276153 - Gm38188 antisense antisense MGP_LPJ_T0006055.1 MGP_LPJ_G0005068.1 mouse_genomes_project 1 192581621 192585346 + Gm34342 lincRNA lincRNA MGP_LPJ_T0002840.1 MGP_LPJ_G0002692.1 mouse_genomes_project 1 60402032 60404451 - 1700122D07Rik antisense antisense MGP_LPJ_T0098450.1 MGP_LPJ_G0036730.1 mouse_genomes_project 1 84776302 84777920 + Gm28941 sense_intronic sense_intronic MGP_LPJ_T0005803.1 MGP_LPJ_G0004870.1 mouse_genomes_project 1 73788906 73822137 + D230017M19Rik lincRNA lincRNA MGP_LPJ_T0005804.1 MGP_LPJ_G0004870.1 mouse_genomes_project 1 73797549 73830848 + D230017M19Rik lincRNA lincRNA MGP_LPJ_T0005805.1 MGP_LPJ_G0004870.1 mouse_genomes_project 1 73820693 73823179 + D230017M19Rik lincRNA lincRNA MGP_LPJ_T0011258.1 MGP_LPJ_G0009376.1 mouse_genomes_project 1 36981819 36982056 + Gm23409 misc_RNA misc_RNA MGP_LPJ_T0023785.1 MGP_LPJ_G0016783.1 mouse_genomes_project 1 187905588 187933851 - MGP_LPJ_P0023785 Psen2 protein_coding unknown_likely_coding MGP_LPJ_T0023786.1 MGP_LPJ_G0016783.1 mouse_genomes_project 1 187905592 187908659 - Psen2 protein_coding processed_transcript MGP_LPJ_T0023787.1 MGP_LPJ_G0016783.1 mouse_genomes_project 1 187905592 187933861 - MGP_LPJ_P0023787 Psen2 protein_coding protein_coding MGP_LPJ_T0023788.1 MGP_LPJ_G0016783.1 mouse_genomes_project 1 187905592 187930761 - MGP_LPJ_P0023788 Psen2 protein_coding protein_coding MGP_LPJ_T0023789.1 MGP_LPJ_G0016783.1 mouse_genomes_project 1 187905594 187908162 - Psen2 protein_coding retained_intron MGP_LPJ_T0023790.1 MGP_LPJ_G0016783.1 mouse_genomes_project 1 187905594 187923575 - MGP_LPJ_P0023790 Psen2 protein_coding protein_coding MGP_LPJ_T0023791.1 MGP_LPJ_G0016783.1 mouse_genomes_project 1 187905977 187908656 - Psen2 protein_coding processed_transcript MGP_LPJ_T0023792.1 MGP_LPJ_G0016783.1 mouse_genomes_project 1 187906031 187925775 - MGP_LPJ_P0023792 Psen2 protein_coding protein_coding MGP_LPJ_T0023793.1 MGP_LPJ_G0016783.1 mouse_genomes_project 1 187906033 187923382 - MGP_LPJ_P0023793 Psen2 protein_coding protein_coding MGP_LPJ_T0023794.1 MGP_LPJ_G0016783.1 mouse_genomes_project 1 187906056 187908619 - Psen2 protein_coding processed_transcript MGP_LPJ_T0023795.1 MGP_LPJ_G0016783.1 mouse_genomes_project 1 187911117 187933805 - Psen2 protein_coding retained_intron MGP_LPJ_T0023796.1 MGP_LPJ_G0016783.1 mouse_genomes_project 1 187913767 187918898 - Psen2 protein_coding retained_intron MGP_LPJ_T0023797.1 MGP_LPJ_G0016783.1 mouse_genomes_project 1 187923262 187940999 - MGP_LPJ_P0023797 Psen2 protein_coding protein_coding MGP_LPJ_T0020046.1 MGP_LPJ_G0015991.1 mouse_genomes_project 1 61287657 61319359 + Cyp20a1 protein_coding retained_intron MGP_LPJ_T0020047.1 MGP_LPJ_G0015991.1 mouse_genomes_project 1 61287657 61334577 + MGP_LPJ_P0020047 Cyp20a1 protein_coding protein_coding MGP_LPJ_T0020048.1 MGP_LPJ_G0015991.1 mouse_genomes_project 1 61287657 61334577 + MGP_LPJ_P0020048 Cyp20a1 protein_coding nonsense_mediated_decay MGP_LPJ_T0002859.1 MGP_LPJ_G0002702.1 mouse_genomes_project 1 75970250 75970956 + Gm28364 antisense antisense MGP_LPJ_T0018979.1 MGP_LPJ_G0015785.1 mouse_genomes_project 1 18575589 18579261 + MGP_LPJ_P0018979 Il17a protein_coding protein_coding MGP_LPJ_T0002948.1 MGP_LPJ_G0002774.1 mouse_genomes_project 1 167371492 167372391 + Gm37362 antisense antisense MGP_LPJ_T0012001.1 MGP_LPJ_G0010092.1 mouse_genomes_project 1 44254298 44254965 - processed_pseudogene processed_pseudogene MGP_LPJ_T0020758.1 MGP_LPJ_G0016121.1 mouse_genomes_project 1 81644046 81702921 - MGP_LPJ_P0020758 Wdfy1 protein_coding protein_coding MGP_LPJ_T0020759.1 MGP_LPJ_G0016121.1 mouse_genomes_project 1 81647139 81702890 - MGP_LPJ_P0020759 Wdfy1 protein_coding nonsense_mediated_decay MGP_LPJ_T0020760.1 MGP_LPJ_G0016121.1 mouse_genomes_project 1 81660568 81718260 - MGP_LPJ_P0020760 Wdfy1 protein_coding protein_coding MGP_LPJ_T0020761.1 MGP_LPJ_G0016121.1 mouse_genomes_project 1 81663275 81702921 - MGP_LPJ_P0020761 Wdfy1 protein_coding protein_coding MGP_LPJ_T0020762.1 MGP_LPJ_G0016121.1 mouse_genomes_project 1 81663288 81702921 - MGP_LPJ_P0020762 Wdfy1 protein_coding protein_coding MGP_LPJ_T0020763.1 MGP_LPJ_G0016121.1 mouse_genomes_project 1 81663477 81666971 - Wdfy1 protein_coding processed_transcript MGP_LPJ_T0020764.1 MGP_LPJ_G0016121.1 mouse_genomes_project 1 81672858 81702873 - Wdfy1 protein_coding retained_intron MGP_LPJ_T0020765.1 MGP_LPJ_G0016121.1 mouse_genomes_project 1 81673091 81703193 - MGP_LPJ_P0020765 Wdfy1 protein_coding protein_coding MGP_LPJ_T0023009.1 MGP_LPJ_G0016587.1 mouse_genomes_project 1 169488291 169552719 - MGP_LPJ_P0023009 Mroh9 protein_coding protein_coding MGP_LPJ_T0005906.1 MGP_LPJ_G0004953.1 mouse_genomes_project 1 125023465 125032929 - Gm29348 lincRNA lincRNA MGP_LPJ_T0000550.1 MGP_LPJ_G0000485.1 mouse_genomes_project 1 73356542 73360063 - TEC TEC MGP_LPJ_T0012330.1 MGP_LPJ_G0010421.1 mouse_genomes_project 1 178272744 178273080 + processed_pseudogene processed_pseudogene MGP_LPJ_T0022139.1 MGP_LPJ_G0016424.1 mouse_genomes_project 1 139324902 139329944 + MGP_LPJ_P0022139 4933406M09Rik protein_coding protein_coding MGP_LPJ_T0000736.1 MGP_LPJ_G0000669.1 mouse_genomes_project 1 164114870 164321685 + TEC TEC MGP_LPJ_T0012357.1 MGP_LPJ_G0010448.1 mouse_genomes_project 1 191710721 191710868 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000489.1 MGP_LPJ_G0000424.1 mouse_genomes_project 1 38050991 38052629 + TEC TEC MGP_LPJ_T0000820.1 MGP_LPJ_G0000751.1 mouse_genomes_project 1 195063095 195066093 - TEC TEC MGP_LPJ_T0000387.1 MGP_LPJ_G0000325.1 mouse_genomes_project 1 633304 635613 - TEC TEC MGP_LPJ_T0000783.1 MGP_LPJ_G0000716.1 mouse_genomes_project 1 184082799 184084587 - TEC TEC MGP_LPJ_T0005681.1 MGP_LPJ_G0004780.1 mouse_genomes_project 1 17063985 17065030 + Gm28340 lincRNA lincRNA MGP_LPJ_T0006010.1 MGP_LPJ_G0005035.1 mouse_genomes_project 1 176016223 176036942 - Gm37839 lincRNA lincRNA MGP_LPJ_T0012126.1 MGP_LPJ_G0010217.1 mouse_genomes_project 1 86271898 86272444 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012103.1 MGP_LPJ_G0010194.1 mouse_genomes_project 1 77253750 77254098 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000712.1 MGP_LPJ_G0000645.1 mouse_genomes_project 1 155033198 155035503 - TEC TEC MGP_LPJ_T0023819.1 MGP_LPJ_G0016788.1 mouse_genomes_project 1 188397694 188401618 - MGP_LPJ_P0023819 Mixl1 protein_coding protein_coding MGP_LPJ_T0005948.1 MGP_LPJ_G0004987.1 mouse_genomes_project 1 143781357 143819431 - Gm5833 lincRNA lincRNA MGP_LPJ_T0005949.1 MGP_LPJ_G0004987.1 mouse_genomes_project 1 143808783 143819419 - Gm5833 lincRNA lincRNA MGP_LPJ_T0021995.1 MGP_LPJ_G0016392.1 mouse_genomes_project 1 137269676 137301079 + MGP_LPJ_P0021995 Rbbp5 protein_coding protein_coding MGP_LPJ_T0021996.1 MGP_LPJ_G0016392.1 mouse_genomes_project 1 137269746 137302248 + MGP_LPJ_P0021996 Rbbp5 protein_coding protein_coding MGP_LPJ_T0021997.1 MGP_LPJ_G0016392.1 mouse_genomes_project 1 137269802 137282811 + MGP_LPJ_P0021997 Rbbp5 protein_coding protein_coding MGP_LPJ_T0021998.1 MGP_LPJ_G0016392.1 mouse_genomes_project 1 137269820 137302253 + MGP_LPJ_P0021998 Rbbp5 protein_coding protein_coding MGP_LPJ_T0021999.1 MGP_LPJ_G0016392.1 mouse_genomes_project 1 137269953 137282895 + MGP_LPJ_P0021999 Rbbp5 protein_coding protein_coding MGP_LPJ_T0022000.1 MGP_LPJ_G0016392.1 mouse_genomes_project 1 137300321 137302244 + Rbbp5 protein_coding retained_intron MGP_LPJ_T0000561.1 MGP_LPJ_G0000496.1 mouse_genomes_project 1 81703860 81705685 + TEC TEC MGP_LPJ_T0000571.1 MGP_LPJ_G0000506.1 mouse_genomes_project 1 84397061 84399894 + TEC TEC MGP_LPJ_T0012190.1 MGP_LPJ_G0010281.1 mouse_genomes_project 1 115620466 115621041 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023551.1 MGP_LPJ_G0016713.1 mouse_genomes_project 1 179840330 179841411 - MGP_LPJ_P0023551 Apcs protein_coding protein_coding MGP_LPJ_T0021437.1 MGP_LPJ_G0016266.1 mouse_genomes_project 1 96630154 96651878 + MGP_LPJ_P0021437 Ing5 protein_coding nonsense_mediated_decay MGP_LPJ_T0021438.1 MGP_LPJ_G0016266.1 mouse_genomes_project 1 96630174 96648098 + MGP_LPJ_P0021438 Ing5 protein_coding protein_coding MGP_LPJ_T0000474.1 MGP_LPJ_G0000409.1 mouse_genomes_project 1 32639856 32642412 + TEC TEC MGP_LPJ_T0000493.1 MGP_LPJ_G0000428.1 mouse_genomes_project 1 39718034 39721942 - TEC TEC MGP_LPJ_T0019692.1 MGP_LPJ_G0015924.1 mouse_genomes_project 1 52658056 52723989 - MGP_LPJ_P0019692 Mfsd6 protein_coding protein_coding MGP_LPJ_T0019693.1 MGP_LPJ_G0015924.1 mouse_genomes_project 1 52658068 52723604 - MGP_LPJ_P0019693 Mfsd6 protein_coding protein_coding MGP_LPJ_T0019694.1 MGP_LPJ_G0015924.1 mouse_genomes_project 1 52659205 52662067 - Mfsd6 protein_coding retained_intron MGP_LPJ_T0019695.1 MGP_LPJ_G0015924.1 mouse_genomes_project 1 52661754 52723989 - MGP_LPJ_P0019695 Mfsd6 protein_coding protein_coding MGP_LPJ_T0019696.1 MGP_LPJ_G0015924.1 mouse_genomes_project 1 52662671 52671032 - Mfsd6 protein_coding processed_transcript MGP_LPJ_T0019697.1 MGP_LPJ_G0015924.1 mouse_genomes_project 1 52677303 52723885 - Mfsd6 protein_coding retained_intron MGP_LPJ_T0000615.1 MGP_LPJ_G0000550.1 mouse_genomes_project 1 109093671 109098026 + TEC TEC MGP_LPJ_T0021591.1 MGP_LPJ_G0016307.1 mouse_genomes_project 1 119580647 120537878 + MGP_LPJ_P0021591 Cntnap5a protein_coding protein_coding MGP_LPJ_T0021592.1 MGP_LPJ_G0016307.1 mouse_genomes_project 1 119581028 120530303 + MGP_LPJ_P0021592 Cntnap5a protein_coding unknown_likely_coding MGP_LPJ_T0009579.1 MGP_LPJ_G0007697.1 mouse_genomes_project 1 200259845 200259926 - Mir3473c miRNA miRNA MGP_LPJ_T0000662.1 MGP_LPJ_G0000597.1 mouse_genomes_project 1 136077593 136078975 - TEC TEC MGP_LPJ_T0099988.1 MGP_LPJ_G0038251.1 mouse_genomes_project 1 64206106 64206141 + Gm26457 snoRNA snoRNA MGP_LPJ_T0002910.1 MGP_LPJ_G0002743.1 mouse_genomes_project 1 137168098 137169479 + Gm15849 antisense antisense MGP_LPJ_T0000524.1 MGP_LPJ_G0000459.1 mouse_genomes_project 1 61952328 61954801 + TEC TEC MGP_LPJ_T0023515.1 MGP_LPJ_G0016705.1 mouse_genomes_project 1 179435812 179443598 + MGP_LPJ_P0023515 Igsf9 protein_coding protein_coding MGP_LPJ_T0023516.1 MGP_LPJ_G0016705.1 mouse_genomes_project 1 179436222 179445656 + MGP_LPJ_P0023516 Igsf9 protein_coding protein_coding MGP_LPJ_T0023517.1 MGP_LPJ_G0016705.1 mouse_genomes_project 1 179436229 179443635 + Igsf9 protein_coding processed_transcript MGP_LPJ_T0023518.1 MGP_LPJ_G0016705.1 mouse_genomes_project 1 179436238 179452886 + MGP_LPJ_P0023518 Igsf9 protein_coding protein_coding MGP_LPJ_T0023519.1 MGP_LPJ_G0016705.1 mouse_genomes_project 1 179436243 179443818 + Igsf9 protein_coding retained_intron MGP_LPJ_T0023520.1 MGP_LPJ_G0016705.1 mouse_genomes_project 1 179436243 179445052 + Igsf9 protein_coding retained_intron MGP_LPJ_T0023521.1 MGP_LPJ_G0016705.1 mouse_genomes_project 1 179436254 179452886 + MGP_LPJ_P0023521 Igsf9 protein_coding nonsense_mediated_decay MGP_LPJ_T0023522.1 MGP_LPJ_G0016705.1 mouse_genomes_project 1 179436337 179452887 + MGP_LPJ_P0023522 Igsf9 protein_coding protein_coding MGP_LPJ_T0023523.1 MGP_LPJ_G0016705.1 mouse_genomes_project 1 179445101 179445995 + Igsf9 protein_coding retained_intron MGP_LPJ_T0023524.1 MGP_LPJ_G0016705.1 mouse_genomes_project 1 179445978 179448882 + MGP_LPJ_P0023524 Igsf9 protein_coding protein_coding MGP_LPJ_T0023525.1 MGP_LPJ_G0016705.1 mouse_genomes_project 1 179447949 179449744 + Igsf9 protein_coding retained_intron MGP_LPJ_T0023526.1 MGP_LPJ_G0016705.1 mouse_genomes_project 1 179447976 179449770 + Igsf9 protein_coding retained_intron MGP_LPJ_T0023527.1 MGP_LPJ_G0016705.1 mouse_genomes_project 1 179448774 179450232 + Igsf9 protein_coding retained_intron MGP_LPJ_T0023528.1 MGP_LPJ_G0016705.1 mouse_genomes_project 1 179451801 179452623 + Igsf9 protein_coding retained_intron MGP_LPJ_T0011915.1 MGP_LPJ_G0010006.1 mouse_genomes_project 1 15705732 15707131 + processed_pseudogene processed_pseudogene MGP_LPJ_T0020801.1 MGP_LPJ_G0016131.1 mouse_genomes_project 1 84361430 84483822 + MGP_LPJ_P0020801 Rhbdd1 protein_coding protein_coding MGP_LPJ_T0020802.1 MGP_LPJ_G0016131.1 mouse_genomes_project 1 84361620 84364709 + Rhbdd1 protein_coding retained_intron MGP_LPJ_T0020803.1 MGP_LPJ_G0016131.1 mouse_genomes_project 1 84383991 84483822 + MGP_LPJ_P0020803 Rhbdd1 protein_coding protein_coding MGP_LPJ_T0098783.1 MGP_LPJ_G0037046.1 mouse_genomes_project 1 140353554 140353660 - Gm22796 snRNA snRNA MGP_LPJ_T0005873.1 MGP_LPJ_G0004928.1 mouse_genomes_project 1 101199783 101206854 + 1810006J02Rik lincRNA lincRNA MGP_LPJ_T0005874.1 MGP_LPJ_G0004928.1 mouse_genomes_project 1 101199794 101213304 + 1810006J02Rik lincRNA lincRNA MGP_LPJ_T0019961.1 MGP_LPJ_G0015978.1 mouse_genomes_project 1 59950351 59986879 - MGP_LPJ_P0019961 Mpp4 protein_coding protein_coding MGP_LPJ_T0019962.1 MGP_LPJ_G0015978.1 mouse_genomes_project 1 59950351 59989847 - MGP_LPJ_P0019962 Mpp4 protein_coding protein_coding MGP_LPJ_T0019963.1 MGP_LPJ_G0015978.1 mouse_genomes_project 1 59950351 59991600 - MGP_LPJ_P0019963 Mpp4 protein_coding protein_coding MGP_LPJ_T0019964.1 MGP_LPJ_G0015978.1 mouse_genomes_project 1 59950352 59989847 - MGP_LPJ_P0019964 Mpp4 protein_coding protein_coding MGP_LPJ_T0019965.1 MGP_LPJ_G0015978.1 mouse_genomes_project 1 59950356 59975056 - Mpp4 protein_coding processed_transcript MGP_LPJ_T0019966.1 MGP_LPJ_G0015978.1 mouse_genomes_project 1 59950560 59986872 - MGP_LPJ_P0019966 Mpp4 protein_coding protein_coding MGP_LPJ_T0019967.1 MGP_LPJ_G0015978.1 mouse_genomes_project 1 59950669 59989778 - Mpp4 protein_coding retained_intron MGP_LPJ_T0019968.1 MGP_LPJ_G0015978.1 mouse_genomes_project 1 59968564 59981599 - Mpp4 protein_coding retained_intron MGP_LPJ_T0019969.1 MGP_LPJ_G0015978.1 mouse_genomes_project 1 59968566 59979886 - Mpp4 protein_coding retained_intron MGP_LPJ_T0019970.1 MGP_LPJ_G0015978.1 mouse_genomes_project 1 59977377 59989783 - Mpp4 protein_coding retained_intron MGP_LPJ_T0000750.1 MGP_LPJ_G0000683.1 mouse_genomes_project 1 167061152 167061579 - TEC TEC MGP_LPJ_T0018826.1 MGP_LPJ_G0015751.1 mouse_genomes_project 1 7821180 8233103 - MGP_LPJ_P0018826 Cpa6 protein_coding nonsense_mediated_decay MGP_LPJ_T0018827.1 MGP_LPJ_G0015751.1 mouse_genomes_project 1 7821187 8233103 - MGP_LPJ_P0018827 Cpa6 protein_coding protein_coding MGP_LPJ_T0018828.1 MGP_LPJ_G0015751.1 mouse_genomes_project 1 7967784 7974680 - Cpa6 protein_coding retained_intron MGP_LPJ_T0018829.1 MGP_LPJ_G0015751.1 mouse_genomes_project 1 8095706 8233063 - Cpa6 protein_coding processed_transcript MGP_LPJ_T0101714.1 MGP_LPJ_G0039752.1 mouse_genomes_project 1 121755594 121757514 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0023223.1 MGP_LPJ_G0016639.1 mouse_genomes_project 1 176672394 176679838 + MGP_LPJ_P0023223 Ccdc190 protein_coding protein_coding MGP_LPJ_T0023224.1 MGP_LPJ_G0016639.1 mouse_genomes_project 1 176673675 176678050 + MGP_LPJ_P0023224 Ccdc190 protein_coding protein_coding MGP_LPJ_T0024003.1 MGP_LPJ_G0016831.1 mouse_genomes_project 1 193210696 193237713 + MGP_LPJ_P0024003 Bpnt1 protein_coding protein_coding MGP_LPJ_T0024004.1 MGP_LPJ_G0016831.1 mouse_genomes_project 1 193210703 193236576 + MGP_LPJ_P0024004 Bpnt1 protein_coding unknown_likely_coding MGP_LPJ_T0024005.1 MGP_LPJ_G0016831.1 mouse_genomes_project 1 193210720 193224432 + MGP_LPJ_P0024005 Bpnt1 protein_coding protein_coding MGP_LPJ_T0024006.1 MGP_LPJ_G0016831.1 mouse_genomes_project 1 193210727 193236736 + MGP_LPJ_P0024006 Bpnt1 protein_coding protein_coding MGP_LPJ_T0024007.1 MGP_LPJ_G0016831.1 mouse_genomes_project 1 193210754 193225816 + Bpnt1 protein_coding processed_transcript MGP_LPJ_T0023907.1 MGP_LPJ_G0016809.1 mouse_genomes_project 1 190121948 190151489 - MGP_LPJ_P0023907 Fbxo28 protein_coding protein_coding MGP_LPJ_T0023908.1 MGP_LPJ_G0016809.1 mouse_genomes_project 1 190124034 190127234 - Fbxo28 protein_coding retained_intron MGP_LPJ_T0023909.1 MGP_LPJ_G0016809.1 mouse_genomes_project 1 190125309 190151471 - MGP_LPJ_P0023909 Fbxo28 protein_coding nonsense_mediated_decay MGP_LPJ_T0023910.1 MGP_LPJ_G0016809.1 mouse_genomes_project 1 190125837 190151442 - MGP_LPJ_P0023910 Fbxo28 protein_coding nonsense_mediated_decay MGP_LPJ_T0023911.1 MGP_LPJ_G0016809.1 mouse_genomes_project 1 190126090 190151500 - MGP_LPJ_P0023911 Fbxo28 protein_coding nonsense_mediated_decay MGP_LPJ_T0024273.1 MGP_LPJ_G0016881.1 mouse_genomes_project 1 202929522 202932155 + Plxna2 protein_coding retained_intron MGP_LPJ_T0024274.1 MGP_LPJ_G0016881.1 mouse_genomes_project 1 202931112 203136604 + MGP_LPJ_P0024274 Plxna2 protein_coding protein_coding MGP_LPJ_T0024275.1 MGP_LPJ_G0016881.1 mouse_genomes_project 1 202957624 202969864 + Plxna2 protein_coding processed_transcript MGP_LPJ_T0024276.1 MGP_LPJ_G0016881.1 mouse_genomes_project 1 203079654 203103551 + MGP_LPJ_P0024276 Plxna2 protein_coding nonsense_mediated_decay MGP_LPJ_T0024277.1 MGP_LPJ_G0016881.1 mouse_genomes_project 1 203121630 203133960 + Plxna2 protein_coding retained_intron MGP_LPJ_T0021673.1 MGP_LPJ_G0016320.1 mouse_genomes_project 1 124129018 124194800 + MGP_LPJ_P0021673 Sctr protein_coding protein_coding MGP_LPJ_T0021674.1 MGP_LPJ_G0016320.1 mouse_genomes_project 1 124129158 124194798 + MGP_LPJ_P0021674 Sctr protein_coding protein_coding MGP_LPJ_T0012128.1 MGP_LPJ_G0010219.1 mouse_genomes_project 1 88681462 88682225 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003012.1 MGP_LPJ_G0002826.1 mouse_genomes_project 1 200085129 200086753 - Gm38037 antisense antisense MGP_LPJ_T0005821.1 MGP_LPJ_G0004881.1 mouse_genomes_project 1 78652252 78807071 - Gm816 lincRNA lincRNA MGP_LPJ_T0002960.1 MGP_LPJ_G0002782.1 mouse_genomes_project 1 170640356 170643223 - Gm16587 antisense antisense MGP_LPJ_T0011268.1 MGP_LPJ_G0009386.1 mouse_genomes_project 1 92286038 92286349 + Gm26037 misc_RNA misc_RNA MGP_LPJ_T0023836.1 MGP_LPJ_G0016794.1 mouse_genomes_project 1 188668210 188672312 + MGP_LPJ_P0023836 Lefty1 protein_coding protein_coding MGP_LPJ_T0023837.1 MGP_LPJ_G0016794.1 mouse_genomes_project 1 188670782 188671722 + Lefty1 protein_coding retained_intron MGP_LPJ_T0005872.1 MGP_LPJ_G0004927.1 mouse_genomes_project 1 99607173 99677510 - lincRNA lincRNA MGP_LPJ_T0023165.1 MGP_LPJ_G0016622.1 mouse_genomes_project 1 172987298 173001736 + MGP_LPJ_P0023165 Tada1 protein_coding protein_coding MGP_LPJ_T0023166.1 MGP_LPJ_G0016622.1 mouse_genomes_project 1 172987518 172997048 + Tada1 protein_coding retained_intron MGP_LPJ_T0023167.1 MGP_LPJ_G0016622.1 mouse_genomes_project 1 172987525 172992310 + Tada1 protein_coding retained_intron MGP_LPJ_T0023168.1 MGP_LPJ_G0016622.1 mouse_genomes_project 1 172987540 172990672 + MGP_LPJ_P0023168 Tada1 protein_coding nonsense_mediated_decay MGP_LPJ_T0021087.1 MGP_LPJ_G0016187.1 mouse_genomes_project 1 90276628 90369242 + MGP_LPJ_P0021087 Dgkd protein_coding protein_coding MGP_LPJ_T0021088.1 MGP_LPJ_G0016187.1 mouse_genomes_project 1 90305003 90340599 + Dgkd protein_coding retained_intron MGP_LPJ_T0021089.1 MGP_LPJ_G0016187.1 mouse_genomes_project 1 90342758 90346832 + Dgkd protein_coding retained_intron MGP_LPJ_T0021090.1 MGP_LPJ_G0016187.1 mouse_genomes_project 1 90356806 90363005 + MGP_LPJ_P0021090 Dgkd protein_coding protein_coding MGP_LPJ_T0021091.1 MGP_LPJ_G0016187.1 mouse_genomes_project 1 90359148 90369932 + MGP_LPJ_P0021091 Dgkd protein_coding protein_coding MGP_LPJ_T0021092.1 MGP_LPJ_G0016187.1 mouse_genomes_project 1 90360034 90365017 + Dgkd protein_coding retained_intron MGP_LPJ_T0021093.1 MGP_LPJ_G0016187.1 mouse_genomes_project 1 90363136 90369930 + MGP_LPJ_P0021093 Dgkd protein_coding protein_coding MGP_LPJ_T0021233.1 MGP_LPJ_G0016224.1 mouse_genomes_project 1 94074258 94113893 - MGP_LPJ_P0021233 Ilkap protein_coding nonsense_mediated_decay MGP_LPJ_T0021234.1 MGP_LPJ_G0016224.1 mouse_genomes_project 1 94074262 94099024 - MGP_LPJ_P0021234 Ilkap protein_coding protein_coding MGP_LPJ_T0021235.1 MGP_LPJ_G0016224.1 mouse_genomes_project 1 94076228 94113976 - MGP_LPJ_P0021235 Ilkap protein_coding protein_coding MGP_LPJ_T0021236.1 MGP_LPJ_G0016224.1 mouse_genomes_project 1 94076229 94113948 - Ilkap protein_coding retained_intron MGP_LPJ_T0021237.1 MGP_LPJ_G0016224.1 mouse_genomes_project 1 94076356 94098971 - MGP_LPJ_P0021237 Ilkap protein_coding protein_coding MGP_LPJ_T0021238.1 MGP_LPJ_G0016224.1 mouse_genomes_project 1 94076408 94079315 - Ilkap protein_coding retained_intron MGP_LPJ_T0021239.1 MGP_LPJ_G0016224.1 mouse_genomes_project 1 94076451 94113986 - MGP_LPJ_P0021239 Ilkap protein_coding protein_coding MGP_LPJ_T0021240.1 MGP_LPJ_G0016224.1 mouse_genomes_project 1 94076452 94113994 - MGP_LPJ_P0021240 Ilkap protein_coding nonsense_mediated_decay MGP_LPJ_T0021241.1 MGP_LPJ_G0016224.1 mouse_genomes_project 1 94095436 94114008 - Ilkap protein_coding processed_transcript MGP_LPJ_T0021242.1 MGP_LPJ_G0016224.1 mouse_genomes_project 1 94099022 94113978 - MGP_LPJ_P0021242 Ilkap protein_coding nonsense_mediated_decay MGP_LPJ_T0021243.1 MGP_LPJ_G0016224.1 mouse_genomes_project 1 94099652 94103202 - Ilkap protein_coding retained_intron MGP_LPJ_T0021244.1 MGP_LPJ_G0016224.1 mouse_genomes_project 1 94099741 94113971 - MGP_LPJ_P0021244 Ilkap protein_coding protein_coding MGP_LPJ_T0021245.1 MGP_LPJ_G0016224.1 mouse_genomes_project 1 94104631 94113987 - Ilkap protein_coding retained_intron MGP_LPJ_T0023201.1 MGP_LPJ_G0016632.1 mouse_genomes_project 1 174083537 174107606 - MGP_LPJ_P0023201 Lrrc52 protein_coding protein_coding MGP_LPJ_T0101741.1 MGP_LPJ_G0039779.1 mouse_genomes_project 1 188763033 188763144 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0022001.1 MGP_LPJ_G0016393.1 mouse_genomes_project 1 137302818 137305228 + MGP_LPJ_P0022001 Tmem81 protein_coding protein_coding MGP_LPJ_T0022002.1 MGP_LPJ_G0016393.1 mouse_genomes_project 1 137303477 137305228 + MGP_LPJ_P0022002 Tmem81 protein_coding protein_coding MGP_LPJ_T0003009.1 MGP_LPJ_G0002824.1 mouse_genomes_project 1 199217122 199217959 + A230020J21Rik antisense antisense MGP_LPJ_T0003010.1 MGP_LPJ_G0002824.1 mouse_genomes_project 1 199217123 199221550 + A230020J21Rik antisense antisense MGP_LPJ_T0012062.1 MGP_LPJ_G0010153.1 mouse_genomes_project 1 61912125 61912361 - processed_pseudogene processed_pseudogene MGP_LPJ_T0022377.1 MGP_LPJ_G0016471.1 mouse_genomes_project 1 144589850 144609418 + MGP_LPJ_P0022377 Zbtb41 protein_coding protein_coding MGP_LPJ_T0022378.1 MGP_LPJ_G0016471.1 mouse_genomes_project 1 144590134 144615091 + MGP_LPJ_P0022378 Zbtb41 protein_coding unknown_likely_coding MGP_LPJ_T0022379.1 MGP_LPJ_G0016471.1 mouse_genomes_project 1 144591216 144616744 + MGP_LPJ_P0022379 Zbtb41 protein_coding nonsense_mediated_decay MGP_LPJ_T0011926.1 MGP_LPJ_G0010017.1 mouse_genomes_project 1 19286269 19318287 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011891.1 MGP_LPJ_G0009982.1 mouse_genomes_project 1 6831417 6833347 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098737.1 MGP_LPJ_G0037000.1 mouse_genomes_project 1 32090486 32090592 + Gm23453 snRNA snRNA MGP_LPJ_T0005743.1 MGP_LPJ_G0004824.1 mouse_genomes_project 1 49052211 49140333 + C230029F24Rik lincRNA lincRNA MGP_LPJ_T0005744.1 MGP_LPJ_G0004824.1 mouse_genomes_project 1 49052211 49137141 + C230029F24Rik lincRNA lincRNA MGP_LPJ_T0005960.1 MGP_LPJ_G0004997.1 mouse_genomes_project 1 157570919 157577909 - 2810414N06Rik lincRNA lincRNA MGP_LPJ_T0023925.1 MGP_LPJ_G0016814.1 mouse_genomes_project 1 190616145 190712344 + MGP_LPJ_P0023925 Susd4 protein_coding protein_coding MGP_LPJ_T0023926.1 MGP_LPJ_G0016814.1 mouse_genomes_project 1 190616297 190750470 + MGP_LPJ_P0023926 Susd4 protein_coding protein_coding MGP_LPJ_T0023927.1 MGP_LPJ_G0016814.1 mouse_genomes_project 1 190616680 190691476 + MGP_LPJ_P0023927 Susd4 protein_coding protein_coding MGP_LPJ_T0023928.1 MGP_LPJ_G0016814.1 mouse_genomes_project 1 190616841 190691502 + MGP_LPJ_P0023928 Susd4 protein_coding protein_coding MGP_LPJ_T0023929.1 MGP_LPJ_G0016814.1 mouse_genomes_project 1 190617180 190751829 + MGP_LPJ_P0023929 Susd4 protein_coding protein_coding MGP_LPJ_T0101735.1 MGP_LPJ_G0039773.1 mouse_genomes_project 1 181349019 181350399 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0098725.1 MGP_LPJ_G0036988.1 mouse_genomes_project 1 7488532 7488636 - Gm24674 snRNA snRNA MGP_LPJ_T0024104.1 MGP_LPJ_G0016849.1 mouse_genomes_project 1 199110764 199133074 + MGP_LPJ_P0024104 Angel2 protein_coding protein_coding MGP_LPJ_T0024105.1 MGP_LPJ_G0016849.1 mouse_genomes_project 1 199114144 199124547 + Angel2 protein_coding retained_intron MGP_LPJ_T0024106.1 MGP_LPJ_G0016849.1 mouse_genomes_project 1 199114144 199133074 + MGP_LPJ_P0024106 Angel2 protein_coding protein_coding MGP_LPJ_T0024107.1 MGP_LPJ_G0016849.1 mouse_genomes_project 1 199114144 199133074 + MGP_LPJ_P0024107 Angel2 protein_coding nonsense_mediated_decay MGP_LPJ_T0024108.1 MGP_LPJ_G0016849.1 mouse_genomes_project 1 199114144 199133074 + MGP_LPJ_P0024108 Angel2 protein_coding protein_coding MGP_LPJ_T0024109.1 MGP_LPJ_G0016849.1 mouse_genomes_project 1 199115045 199124117 + Angel2 protein_coding retained_intron MGP_LPJ_T0024110.1 MGP_LPJ_G0016849.1 mouse_genomes_project 1 199118980 199123589 + MGP_LPJ_P0024110 Angel2 protein_coding nonsense_mediated_decay MGP_LPJ_T0024111.1 MGP_LPJ_G0016849.1 mouse_genomes_project 1 199123363 199125381 + Angel2 protein_coding retained_intron MGP_LPJ_T0024112.1 MGP_LPJ_G0016849.1 mouse_genomes_project 1 199123555 199133074 + Angel2 protein_coding processed_transcript MGP_LPJ_T0019864.1 MGP_LPJ_G0015962.1 mouse_genomes_project 1 58943476 59015963 + MGP_LPJ_P0019864 protein_coding protein_coding MGP_LPJ_T0019865.1 MGP_LPJ_G0015962.1 mouse_genomes_project 1 58943511 59007367 + protein_coding processed_transcript MGP_LPJ_T0019866.1 MGP_LPJ_G0015962.1 mouse_genomes_project 1 58943530 58948500 + protein_coding processed_transcript MGP_LPJ_T0019867.1 MGP_LPJ_G0015962.1 mouse_genomes_project 1 58944298 58946454 + protein_coding retained_intron MGP_LPJ_T0019868.1 MGP_LPJ_G0015962.1 mouse_genomes_project 1 58974806 58989676 + protein_coding retained_intron MGP_LPJ_T0022603.1 MGP_LPJ_G0016516.1 mouse_genomes_project 1 159455643 159506372 - MGP_LPJ_P0022603 Npl protein_coding protein_coding MGP_LPJ_T0022604.1 MGP_LPJ_G0016516.1 mouse_genomes_project 1 159504745 159506036 - Npl protein_coding retained_intron MGP_LPJ_T0005881.1 MGP_LPJ_G0004934.1 mouse_genomes_project 1 109377609 109388541 - Gm7160 lincRNA lincRNA MGP_LPJ_T0005882.1 MGP_LPJ_G0004934.1 mouse_genomes_project 1 109387493 109388511 - Gm7160 lincRNA lincRNA MGP_LPJ_T0000612.1 MGP_LPJ_G0000547.1 mouse_genomes_project 1 106967832 106971489 + TEC TEC MGP_LPJ_T0023420.1 MGP_LPJ_G0016682.1 mouse_genomes_project 1 178478476 178483021 + Cd244 protein_coding retained_intron MGP_LPJ_T0023421.1 MGP_LPJ_G0016682.1 mouse_genomes_project 1 178478476 178513874 + MGP_LPJ_P0023421 Cd244 protein_coding nonsense_mediated_decay MGP_LPJ_T0023422.1 MGP_LPJ_G0016682.1 mouse_genomes_project 1 178478476 178490579 + MGP_LPJ_P0023422 Cd244 protein_coding protein_coding MGP_LPJ_T0023423.1 MGP_LPJ_G0016682.1 mouse_genomes_project 1 178483837 178490579 + Cd244 protein_coding retained_intron MGP_LPJ_T0012091.1 MGP_LPJ_G0010182.1 mouse_genomes_project 1 69647861 69648308 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000589.1 MGP_LPJ_G0000524.1 mouse_genomes_project 1 89320240 89324070 + TEC TEC MGP_LPJ_T0000675.1 MGP_LPJ_G0000609.1 mouse_genomes_project 1 140482812 140483835 - TEC TEC MGP_LPJ_T0023768.1 MGP_LPJ_G0016782.1 mouse_genomes_project 1 187842778 187871014 - MGP_LPJ_P0023768 Coq8a protein_coding protein_coding MGP_LPJ_T0023769.1 MGP_LPJ_G0016782.1 mouse_genomes_project 1 187842778 187873549 - MGP_LPJ_P0023769 Coq8a protein_coding protein_coding MGP_LPJ_T0023770.1 MGP_LPJ_G0016782.1 mouse_genomes_project 1 187844559 187873467 - MGP_LPJ_P0023770 Coq8a protein_coding protein_coding MGP_LPJ_T0023771.1 MGP_LPJ_G0016782.1 mouse_genomes_project 1 187844691 187856172 - MGP_LPJ_P0023771 Coq8a protein_coding protein_coding MGP_LPJ_T0023772.1 MGP_LPJ_G0016782.1 mouse_genomes_project 1 187844931 187873510 - MGP_LPJ_P0023772 Coq8a protein_coding nonsense_mediated_decay MGP_LPJ_T0023773.1 MGP_LPJ_G0016782.1 mouse_genomes_project 1 187847663 187873490 - MGP_LPJ_P0023773 Coq8a protein_coding protein_coding MGP_LPJ_T0023774.1 MGP_LPJ_G0016782.1 mouse_genomes_project 1 187847670 187859638 - MGP_LPJ_P0023774 Coq8a protein_coding nonsense_mediated_decay MGP_LPJ_T0023775.1 MGP_LPJ_G0016782.1 mouse_genomes_project 1 187848745 187856463 - Coq8a protein_coding retained_intron MGP_LPJ_T0023776.1 MGP_LPJ_G0016782.1 mouse_genomes_project 1 187856547 187873490 - MGP_LPJ_P0023776 Coq8a protein_coding protein_coding MGP_LPJ_T0023777.1 MGP_LPJ_G0016782.1 mouse_genomes_project 1 187856612 187871012 - MGP_LPJ_P0023777 Coq8a protein_coding protein_coding MGP_LPJ_T0023778.1 MGP_LPJ_G0016782.1 mouse_genomes_project 1 187856649 187873604 - MGP_LPJ_P0023778 Coq8a protein_coding protein_coding MGP_LPJ_T0023779.1 MGP_LPJ_G0016782.1 mouse_genomes_project 1 187856676 187860341 - MGP_LPJ_P0023779 Coq8a protein_coding protein_coding MGP_LPJ_T0023780.1 MGP_LPJ_G0016782.1 mouse_genomes_project 1 187856682 187873501 - MGP_LPJ_P0023780 Coq8a protein_coding nonsense_mediated_decay MGP_LPJ_T0023781.1 MGP_LPJ_G0016782.1 mouse_genomes_project 1 187856685 187871191 - MGP_LPJ_P0023781 Coq8a protein_coding protein_coding MGP_LPJ_T0023782.1 MGP_LPJ_G0016782.1 mouse_genomes_project 1 187856736 187873501 - MGP_LPJ_P0023782 Coq8a protein_coding nonsense_mediated_decay MGP_LPJ_T0023783.1 MGP_LPJ_G0016782.1 mouse_genomes_project 1 187856788 187877015 - MGP_LPJ_P0023783 Coq8a protein_coding protein_coding MGP_LPJ_T0023784.1 MGP_LPJ_G0016782.1 mouse_genomes_project 1 187859713 187873431 - MGP_LPJ_P0023784 Coq8a protein_coding protein_coding MGP_LPJ_T0023561.1 MGP_LPJ_G0016721.1 mouse_genomes_project 1 180336252 180338119 - Ackr1 protein_coding processed_transcript MGP_LPJ_T0023562.1 MGP_LPJ_G0016721.1 mouse_genomes_project 1 180336256 180337871 - MGP_LPJ_P0023562 Ackr1 protein_coding protein_coding MGP_LPJ_T0023563.1 MGP_LPJ_G0016721.1 mouse_genomes_project 1 180336258 180338042 - MGP_LPJ_P0023563 Ackr1 protein_coding protein_coding MGP_LPJ_T0023403.1 MGP_LPJ_G0016678.1 mouse_genomes_project 1 178323293 178330127 + MGP_LPJ_P0023403 Usf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0023404.1 MGP_LPJ_G0016678.1 mouse_genomes_project 1 178323293 178331160 + MGP_LPJ_P0023404 Usf1 protein_coding protein_coding MGP_LPJ_T0023405.1 MGP_LPJ_G0016678.1 mouse_genomes_project 1 178323293 178328979 + MGP_LPJ_P0023405 Usf1 protein_coding protein_coding MGP_LPJ_T0023406.1 MGP_LPJ_G0016678.1 mouse_genomes_project 1 178323306 178327735 + Usf1 protein_coding processed_transcript MGP_LPJ_T0023407.1 MGP_LPJ_G0016678.1 mouse_genomes_project 1 178323314 178329362 + Usf1 protein_coding retained_intron MGP_LPJ_T0023408.1 MGP_LPJ_G0016678.1 mouse_genomes_project 1 178323354 178327611 + Usf1 protein_coding retained_intron MGP_LPJ_T0023409.1 MGP_LPJ_G0016678.1 mouse_genomes_project 1 178323364 178330776 + MGP_LPJ_P0023409 Usf1 protein_coding protein_coding MGP_LPJ_T0023410.1 MGP_LPJ_G0016678.1 mouse_genomes_project 1 178323661 178330762 + MGP_LPJ_P0023410 Usf1 protein_coding protein_coding MGP_LPJ_T0023411.1 MGP_LPJ_G0016678.1 mouse_genomes_project 1 178329335 178329936 + Usf1 protein_coding retained_intron MGP_LPJ_T0023412.1 MGP_LPJ_G0016678.1 mouse_genomes_project 1 178329465 178330437 + Usf1 protein_coding retained_intron MGP_LPJ_T0012289.1 MGP_LPJ_G0010380.1 mouse_genomes_project 1 158849488 158850191 - processed_pseudogene processed_pseudogene MGP_LPJ_T0020346.1 MGP_LPJ_G0016050.1 mouse_genomes_project 1 74291743 74294323 + MGP_LPJ_P0020346 Rpl37a protein_coding protein_coding MGP_LPJ_T0012088.1 MGP_LPJ_G0010179.1 mouse_genomes_project 1 67992866 67995400 + processed_pseudogene processed_pseudogene MGP_LPJ_T0019506.1 MGP_LPJ_G0015891.1 mouse_genomes_project 1 42359588 42411390 - MGP_LPJ_P0019506 Tgfbrap1 protein_coding protein_coding MGP_LPJ_T0019507.1 MGP_LPJ_G0015891.1 mouse_genomes_project 1 42359608 42405470 - MGP_LPJ_P0019507 Tgfbrap1 protein_coding protein_coding MGP_LPJ_T0019508.1 MGP_LPJ_G0015891.1 mouse_genomes_project 1 42367096 42373321 - Tgfbrap1 protein_coding retained_intron MGP_LPJ_T0019509.1 MGP_LPJ_G0015891.1 mouse_genomes_project 1 42372278 42405188 - MGP_LPJ_P0019509 Tgfbrap1 protein_coding protein_coding MGP_LPJ_T0019510.1 MGP_LPJ_G0015891.1 mouse_genomes_project 1 42384227 42411376 - MGP_LPJ_P0019510 Tgfbrap1 protein_coding protein_coding MGP_LPJ_T0019511.1 MGP_LPJ_G0015891.1 mouse_genomes_project 1 42386972 42405204 - Tgfbrap1 protein_coding retained_intron MGP_LPJ_T0019512.1 MGP_LPJ_G0015891.1 mouse_genomes_project 1 42387213 42411405 - Tgfbrap1 protein_coding retained_intron MGP_LPJ_T0019513.1 MGP_LPJ_G0015891.1 mouse_genomes_project 1 42388347 42411132 - MGP_LPJ_P0019513 Tgfbrap1 protein_coding protein_coding MGP_LPJ_T0000674.1 MGP_LPJ_G0000608.1 mouse_genomes_project 1 139784570 139792204 - TEC TEC MGP_LPJ_T0012162.1 MGP_LPJ_G0010253.1 mouse_genomes_project 1 105085652 105085888 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002913.1 MGP_LPJ_G0002746.1 mouse_genomes_project 1 138093437 138114000 - Gm19461 antisense antisense MGP_LPJ_T0002914.1 MGP_LPJ_G0002746.1 mouse_genomes_project 1 138094247 138100158 - Gm19461 antisense antisense MGP_LPJ_T0002915.1 MGP_LPJ_G0002746.1 mouse_genomes_project 1 138096942 138097332 - Gm19461 antisense antisense MGP_LPJ_T0002916.1 MGP_LPJ_G0002746.1 mouse_genomes_project 1 138097322 138099392 - Gm19461 antisense antisense MGP_LPJ_T0002917.1 MGP_LPJ_G0002746.1 mouse_genomes_project 1 138099580 138101712 - Gm19461 antisense antisense MGP_LPJ_T0021103.1 MGP_LPJ_G0016189.1 mouse_genomes_project 1 90479944 90700328 + MGP_LPJ_P0021103 protein_coding protein_coding MGP_LPJ_T0021104.1 MGP_LPJ_G0016189.1 mouse_genomes_project 1 90479967 90703616 + MGP_LPJ_P0021104 protein_coding protein_coding MGP_LPJ_T0021105.1 MGP_LPJ_G0016189.1 mouse_genomes_project 1 90480037 90700260 + MGP_LPJ_P0021105 protein_coding protein_coding MGP_LPJ_T0020966.1 MGP_LPJ_G0016164.1 mouse_genomes_project 1 88791825 88793459 + MGP_LPJ_P0020966 1700019O17Rik protein_coding protein_coding MGP_LPJ_T0101703.1 MGP_LPJ_G0039741.1 mouse_genomes_project 1 95374887 95374999 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0022822.1 MGP_LPJ_G0016555.1 mouse_genomes_project 1 165480127 165502258 + MGP_LPJ_P0022822 protein_coding nonsense_mediated_decay MGP_LPJ_T0022823.1 MGP_LPJ_G0016555.1 mouse_genomes_project 1 165480129 165601968 + MGP_LPJ_P0022823 protein_coding protein_coding MGP_LPJ_T0022824.1 MGP_LPJ_G0016555.1 mouse_genomes_project 1 165480241 165599135 + MGP_LPJ_P0022824 protein_coding unknown_likely_coding MGP_LPJ_T0022825.1 MGP_LPJ_G0016555.1 mouse_genomes_project 1 165483034 165541621 + MGP_LPJ_P0022825 protein_coding protein_coding MGP_LPJ_T0022826.1 MGP_LPJ_G0016555.1 mouse_genomes_project 1 165483076 165502281 + MGP_LPJ_P0022826 protein_coding nonsense_mediated_decay MGP_LPJ_T0022827.1 MGP_LPJ_G0016555.1 mouse_genomes_project 1 165490100 165519072 + protein_coding retained_intron MGP_LPJ_T0022828.1 MGP_LPJ_G0016555.1 mouse_genomes_project 1 165518819 165525728 + protein_coding retained_intron MGP_LPJ_T0022829.1 MGP_LPJ_G0016555.1 mouse_genomes_project 1 165558532 165560981 + protein_coding retained_intron MGP_LPJ_T0022830.1 MGP_LPJ_G0016555.1 mouse_genomes_project 1 165558543 165577273 + MGP_LPJ_P0022830 protein_coding protein_coding MGP_LPJ_T0022831.1 MGP_LPJ_G0016555.1 mouse_genomes_project 1 165560338 165577353 + protein_coding retained_intron MGP_LPJ_T0022832.1 MGP_LPJ_G0016555.1 mouse_genomes_project 1 165573232 165578200 + protein_coding retained_intron MGP_LPJ_T0022833.1 MGP_LPJ_G0016555.1 mouse_genomes_project 1 165596652 165599397 + protein_coding retained_intron MGP_LPJ_T0023605.1 MGP_LPJ_G0016747.1 mouse_genomes_project 1 181621357 181622367 + MGP_LPJ_P0023605 Olfr248 protein_coding protein_coding MGP_LPJ_T0021004.1 MGP_LPJ_G0016176.1 mouse_genomes_project 1 89605222 89608863 + MGP_LPJ_P0021004 Chrng protein_coding protein_coding MGP_LPJ_T0021005.1 MGP_LPJ_G0016176.1 mouse_genomes_project 1 89606372 89608862 + MGP_LPJ_P0021005 Chrng protein_coding protein_coding MGP_LPJ_T0021006.1 MGP_LPJ_G0016176.1 mouse_genomes_project 1 89606373 89614477 + MGP_LPJ_P0021006 Chrng protein_coding protein_coding MGP_LPJ_T0021007.1 MGP_LPJ_G0016176.1 mouse_genomes_project 1 89606447 89608862 + MGP_LPJ_P0021007 Chrng protein_coding protein_coding MGP_LPJ_T0021008.1 MGP_LPJ_G0016176.1 mouse_genomes_project 1 89606636 89609162 + Chrng protein_coding retained_intron MGP_LPJ_T0002838.1 MGP_LPJ_G0002690.1 mouse_genomes_project 1 59980298 59997531 + Gm29017 antisense antisense MGP_LPJ_T0002804.1 MGP_LPJ_G0002664.1 mouse_genomes_project 1 36290608 36295060 - 4930439A04Rik antisense antisense MGP_LPJ_T0002805.1 MGP_LPJ_G0002664.1 mouse_genomes_project 1 36294442 36295076 - 4930439A04Rik antisense antisense MGP_LPJ_T0020349.1 MGP_LPJ_G0016052.1 mouse_genomes_project 1 74457327 74474263 - MGP_LPJ_P0020349 Igfbp5 protein_coding protein_coding MGP_LPJ_T0020350.1 MGP_LPJ_G0016052.1 mouse_genomes_project 1 74457460 74473654 - Igfbp5 protein_coding processed_transcript MGP_LPJ_T0019531.1 MGP_LPJ_G0015897.1 mouse_genomes_project 1 43287581 43304815 + Tpp2 protein_coding processed_transcript MGP_LPJ_T0019532.1 MGP_LPJ_G0015897.1 mouse_genomes_project 1 43287941 43357917 + MGP_LPJ_P0019532 Tpp2 protein_coding protein_coding MGP_LPJ_T0019533.1 MGP_LPJ_G0015897.1 mouse_genomes_project 1 43287948 43312411 + Tpp2 protein_coding retained_intron MGP_LPJ_T0019534.1 MGP_LPJ_G0015897.1 mouse_genomes_project 1 43287949 43312411 + Tpp2 protein_coding retained_intron MGP_LPJ_T0019535.1 MGP_LPJ_G0015897.1 mouse_genomes_project 1 43287949 43357946 + MGP_LPJ_P0019535 Tpp2 protein_coding protein_coding MGP_LPJ_T0019536.1 MGP_LPJ_G0015897.1 mouse_genomes_project 1 43287967 43346275 + MGP_LPJ_P0019536 Tpp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0019537.1 MGP_LPJ_G0015897.1 mouse_genomes_project 1 43287979 43346256 + MGP_LPJ_P0019537 Tpp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0019538.1 MGP_LPJ_G0015897.1 mouse_genomes_project 1 43326677 43332687 + MGP_LPJ_P0019538 Tpp2 protein_coding protein_coding MGP_LPJ_T0019539.1 MGP_LPJ_G0015897.1 mouse_genomes_project 1 43338957 43357946 + MGP_LPJ_P0019539 Tpp2 protein_coding protein_coding MGP_LPJ_T0019540.1 MGP_LPJ_G0015897.1 mouse_genomes_project 1 43355766 43357282 + Tpp2 protein_coding retained_intron MGP_LPJ_T0022574.1 MGP_LPJ_G0016511.1 mouse_genomes_project 1 158856445 159032317 + MGP_LPJ_P0022574 Nmnat2 protein_coding nonsense_mediated_decay MGP_LPJ_T0022575.1 MGP_LPJ_G0016511.1 mouse_genomes_project 1 158856450 159032414 + MGP_LPJ_P0022575 Nmnat2 protein_coding protein_coding MGP_LPJ_T0022576.1 MGP_LPJ_G0016511.1 mouse_genomes_project 1 158856493 159006294 + MGP_LPJ_P0022576 Nmnat2 protein_coding protein_coding MGP_LPJ_T0022577.1 MGP_LPJ_G0016511.1 mouse_genomes_project 1 158856726 158992885 + Nmnat2 protein_coding processed_transcript MGP_LPJ_T0022578.1 MGP_LPJ_G0016511.1 mouse_genomes_project 1 158944129 158990196 + Nmnat2 protein_coding retained_intron MGP_LPJ_T0022579.1 MGP_LPJ_G0016511.1 mouse_genomes_project 1 159005685 159006803 + Nmnat2 protein_coding processed_transcript MGP_LPJ_T0000472.1 MGP_LPJ_G0000407.1 mouse_genomes_project 1 32456807 32457148 + TEC TEC MGP_LPJ_T0021311.1 MGP_LPJ_G0016245.1 mouse_genomes_project 1 95698503 95708577 + MGP_LPJ_P0021311 Rnpepl1 protein_coding protein_coding MGP_LPJ_T0021312.1 MGP_LPJ_G0016245.1 mouse_genomes_project 1 95698545 95708308 + Rnpepl1 protein_coding retained_intron MGP_LPJ_T0021313.1 MGP_LPJ_G0016245.1 mouse_genomes_project 1 95698573 95701129 + Rnpepl1 protein_coding retained_intron MGP_LPJ_T0021314.1 MGP_LPJ_G0016245.1 mouse_genomes_project 1 95698841 95704473 + MGP_LPJ_P0021314 Rnpepl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0021315.1 MGP_LPJ_G0016245.1 mouse_genomes_project 1 95698929 95703669 + MGP_LPJ_P0021315 Rnpepl1 protein_coding protein_coding MGP_LPJ_T0021316.1 MGP_LPJ_G0016245.1 mouse_genomes_project 1 95703579 95708308 + Rnpepl1 protein_coding retained_intron MGP_LPJ_T0021317.1 MGP_LPJ_G0016245.1 mouse_genomes_project 1 95704526 95708308 + MGP_LPJ_P0021317 Rnpepl1 protein_coding protein_coding MGP_LPJ_T0021318.1 MGP_LPJ_G0016245.1 mouse_genomes_project 1 95704540 95706952 + Rnpepl1 protein_coding retained_intron MGP_LPJ_T0021319.1 MGP_LPJ_G0016245.1 mouse_genomes_project 1 95704747 95705809 + Rnpepl1 protein_coding retained_intron MGP_LPJ_T0021320.1 MGP_LPJ_G0016245.1 mouse_genomes_project 1 95704882 95706801 + MGP_LPJ_P0021320 Rnpepl1 protein_coding protein_coding MGP_LPJ_T0021321.1 MGP_LPJ_G0016245.1 mouse_genomes_project 1 95705151 95706953 + Rnpepl1 protein_coding retained_intron MGP_LPJ_T0021322.1 MGP_LPJ_G0016245.1 mouse_genomes_project 1 95707349 95712121 + MGP_LPJ_P0021322 Rnpepl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0019493.1 MGP_LPJ_G0015888.1 mouse_genomes_project 1 41987394 41994273 + MGP_LPJ_P0019493 Pou3f3 protein_coding protein_coding MGP_LPJ_T0018654.1 MGP_LPJ_G0015726.1 mouse_genomes_project 1 1702645 1709222 - MGP_LPJ_P0018654 Sox17 protein_coding protein_coding MGP_LPJ_T0018655.1 MGP_LPJ_G0015726.1 mouse_genomes_project 1 1702964 1709566 - MGP_LPJ_P0018655 Sox17 protein_coding protein_coding MGP_LPJ_T0018656.1 MGP_LPJ_G0015726.1 mouse_genomes_project 1 1703104 1710163 - MGP_LPJ_P0018656 Sox17 protein_coding protein_coding MGP_LPJ_T0018657.1 MGP_LPJ_G0015726.1 mouse_genomes_project 1 1703427 1709172 - MGP_LPJ_P0018657 Sox17 protein_coding protein_coding MGP_LPJ_T0018658.1 MGP_LPJ_G0015726.1 mouse_genomes_project 1 1704171 1705319 - Sox17 protein_coding retained_intron MGP_LPJ_T0018659.1 MGP_LPJ_G0015726.1 mouse_genomes_project 1 1704172 1709139 - MGP_LPJ_P0018659 Sox17 protein_coding protein_coding MGP_LPJ_T0018660.1 MGP_LPJ_G0015726.1 mouse_genomes_project 1 1704179 1706544 - MGP_LPJ_P0018660 Sox17 protein_coding protein_coding MGP_LPJ_T0018661.1 MGP_LPJ_G0015726.1 mouse_genomes_project 1 1704181 1709205 - MGP_LPJ_P0018661 Sox17 protein_coding protein_coding MGP_LPJ_T0000697.1 MGP_LPJ_G0000630.1 mouse_genomes_project 1 144232025 144236148 - TEC TEC MGP_LPJ_T0016985.1 MGP_LPJ_G0015029.1 mouse_genomes_project 1 143006633 143007745 + Gm4258 processed_transcript retained_intron MGP_LPJ_T0016986.1 MGP_LPJ_G0015029.1 mouse_genomes_project 1 143006636 143110147 + Gm4258 processed_transcript lincRNA MGP_LPJ_T0005693.1 MGP_LPJ_G0004791.1 mouse_genomes_project 1 29223714 29225118 - Gm9898 lincRNA lincRNA MGP_LPJ_T0021713.1 MGP_LPJ_G0016331.1 mouse_genomes_project 1 125743235 125761404 - MGP_LPJ_P0021713 protein_coding protein_coding MGP_LPJ_T0021714.1 MGP_LPJ_G0016331.1 mouse_genomes_project 1 125745080 125749958 - protein_coding retained_intron MGP_LPJ_T0021715.1 MGP_LPJ_G0016331.1 mouse_genomes_project 1 125748147 125751018 - MGP_LPJ_P0021715 protein_coding protein_coding MGP_LPJ_T0021716.1 MGP_LPJ_G0016331.1 mouse_genomes_project 1 125758007 125761137 - protein_coding processed_transcript MGP_LPJ_T0012073.1 MGP_LPJ_G0010164.1 mouse_genomes_project 1 64399640 64400257 - processed_pseudogene processed_pseudogene MGP_LPJ_T0019104.1 MGP_LPJ_G0015816.1 mouse_genomes_project 1 32425862 32430197 + Rab23 protein_coding processed_transcript MGP_LPJ_T0019105.1 MGP_LPJ_G0015816.1 mouse_genomes_project 1 32425862 32433251 + Rab23 protein_coding retained_intron MGP_LPJ_T0019106.1 MGP_LPJ_G0015816.1 mouse_genomes_project 1 32425870 32451505 + MGP_LPJ_P0019106 Rab23 protein_coding protein_coding MGP_LPJ_T0019107.1 MGP_LPJ_G0015816.1 mouse_genomes_project 1 32425884 32451498 + MGP_LPJ_P0019107 Rab23 protein_coding nonsense_mediated_decay MGP_LPJ_T0019108.1 MGP_LPJ_G0015816.1 mouse_genomes_project 1 32425885 32431836 + Rab23 protein_coding retained_intron MGP_LPJ_T0019109.1 MGP_LPJ_G0015816.1 mouse_genomes_project 1 32426113 32442869 + Rab23 protein_coding retained_intron MGP_LPJ_T0019110.1 MGP_LPJ_G0015816.1 mouse_genomes_project 1 32426382 32451502 + MGP_LPJ_P0019110 Rab23 protein_coding protein_coding MGP_LPJ_T0019111.1 MGP_LPJ_G0015816.1 mouse_genomes_project 1 32442042 32449652 + Rab23 protein_coding retained_intron MGP_LPJ_T0019112.1 MGP_LPJ_G0015816.1 mouse_genomes_project 1 32444136 32448311 + Rab23 protein_coding retained_intron MGP_LPJ_T0019113.1 MGP_LPJ_G0015816.1 mouse_genomes_project 1 32447077 32449713 + Rab23 protein_coding retained_intron MGP_LPJ_T0011880.1 MGP_LPJ_G0009971.1 mouse_genomes_project 1 4454779 4455167 - processed_pseudogene processed_pseudogene MGP_LPJ_T0021758.1 MGP_LPJ_G0016339.1 mouse_genomes_project 1 132042982 132236546 - MGP_LPJ_P0021758 Tmem163 protein_coding nonsense_mediated_decay MGP_LPJ_T0021759.1 MGP_LPJ_G0016339.1 mouse_genomes_project 1 132042994 132236471 - MGP_LPJ_P0021759 Tmem163 protein_coding protein_coding MGP_LPJ_T0021760.1 MGP_LPJ_G0016339.1 mouse_genomes_project 1 132048149 132237997 - MGP_LPJ_P0021760 Tmem163 protein_coding protein_coding MGP_LPJ_T0021761.1 MGP_LPJ_G0016339.1 mouse_genomes_project 1 132048612 132060813 - Tmem163 protein_coding retained_intron MGP_LPJ_T0021762.1 MGP_LPJ_G0016339.1 mouse_genomes_project 1 132048796 132098899 - Tmem163 protein_coding processed_transcript MGP_LPJ_T0021593.1 MGP_LPJ_G0016308.1 mouse_genomes_project 1 122316295 122340921 - MGP_LPJ_P0021593 Tsn protein_coding protein_coding MGP_LPJ_T0021594.1 MGP_LPJ_G0016308.1 mouse_genomes_project 1 122323555 122339743 - Tsn protein_coding retained_intron MGP_LPJ_T0021595.1 MGP_LPJ_G0016308.1 mouse_genomes_project 1 122324794 122339492 - Tsn protein_coding retained_intron MGP_LPJ_T0021596.1 MGP_LPJ_G0016308.1 mouse_genomes_project 1 122332088 122340967 - Tsn protein_coding processed_transcript MGP_LPJ_T0021597.1 MGP_LPJ_G0016308.1 mouse_genomes_project 1 122338212 122340741 - Tsn protein_coding retained_intron MGP_LPJ_T0021598.1 MGP_LPJ_G0016308.1 mouse_genomes_project 1 122340185 122341244 - Tsn protein_coding retained_intron MGP_LPJ_T0021692.1 MGP_LPJ_G0016325.1 mouse_genomes_project 1 124490361 124492952 + MGP_LPJ_P0021692 C1ql2 protein_coding protein_coding MGP_LPJ_T0012214.1 MGP_LPJ_G0010305.1 mouse_genomes_project 1 124011697 124012361 + processed_pseudogene processed_pseudogene MGP_LPJ_T0019746.1 MGP_LPJ_G0015939.1 mouse_genomes_project 1 54768427 54790292 + Ccdc150 protein_coding retained_intron MGP_LPJ_T0019747.1 MGP_LPJ_G0015939.1 mouse_genomes_project 1 54768427 54879464 + MGP_LPJ_P0019747 Ccdc150 protein_coding protein_coding MGP_LPJ_T0019748.1 MGP_LPJ_G0015939.1 mouse_genomes_project 1 54768466 54879207 + MGP_LPJ_P0019748 Ccdc150 protein_coding nonsense_mediated_decay MGP_LPJ_T0019749.1 MGP_LPJ_G0015939.1 mouse_genomes_project 1 54839939 54879345 + Ccdc150 protein_coding processed_transcript MGP_LPJ_T0019750.1 MGP_LPJ_G0015939.1 mouse_genomes_project 1 54865487 54879340 + Ccdc150 protein_coding retained_intron MGP_LPJ_T0002941.1 MGP_LPJ_G0002767.1 mouse_genomes_project 1 161908388 161951013 + Gm37571 antisense antisense MGP_LPJ_T0006068.1 MGP_LPJ_G0005079.1 mouse_genomes_project 1 195430847 195445732 + Gm37896 lincRNA lincRNA MGP_LPJ_T0011898.1 MGP_LPJ_G0009989.1 mouse_genomes_project 1 8207400 8207846 + processed_pseudogene processed_pseudogene MGP_LPJ_T0022631.1 MGP_LPJ_G0016523.1 mouse_genomes_project 1 159887982 159899775 + MGP_LPJ_P0022631 Teddm1a protein_coding protein_coding MGP_LPJ_T0098768.1 MGP_LPJ_G0037031.1 mouse_genomes_project 1 102108706 102108806 + Gm23434 snRNA snRNA MGP_LPJ_T0012244.1 MGP_LPJ_G0010335.1 mouse_genomes_project 1 139026194 139028125 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100002.1 MGP_LPJ_G0038265.1 mouse_genomes_project 1 103438582 103438714 - Gm23602 snoRNA snoRNA MGP_LPJ_T0023074.1 MGP_LPJ_G0016605.1 mouse_genomes_project 1 171474158 171478042 - MGP_LPJ_P0023074 Xcl1 protein_coding protein_coding MGP_LPJ_T0098451.1 MGP_LPJ_G0036731.1 mouse_genomes_project 1 92161734 92169602 + Gm28499 sense_intronic sense_intronic MGP_LPJ_T0101718.1 MGP_LPJ_G0039756.1 mouse_genomes_project 1 144760484 145038196 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0005686.1 MGP_LPJ_G0004785.1 mouse_genomes_project 1 21274695 21275094 + Gm27028 lincRNA lincRNA MGP_LPJ_T0018672.1 MGP_LPJ_G0015729.1 mouse_genomes_project 1 2023150 2109157 + MGP_LPJ_P0018672 Gm37988 protein_coding nonsense_mediated_decay MGP_LPJ_T0020989.1 MGP_LPJ_G0016170.1 mouse_genomes_project 1 89488520 89491738 - MGP_LPJ_P0020989 Alppl2 protein_coding protein_coding MGP_LPJ_T0020990.1 MGP_LPJ_G0016170.1 mouse_genomes_project 1 89488521 89491755 - MGP_LPJ_P0020990 Alppl2 protein_coding protein_coding MGP_LPJ_T0020991.1 MGP_LPJ_G0016170.1 mouse_genomes_project 1 89490606 89491632 - Alppl2 protein_coding retained_intron MGP_LPJ_T0000665.1 MGP_LPJ_G0000600.1 mouse_genomes_project 1 136873438 136879397 + TEC TEC MGP_LPJ_T0016923.1 MGP_LPJ_G0015006.1 mouse_genomes_project 1 35463840 35467379 + D430040D24Rik processed_transcript retained_intron MGP_LPJ_T0016924.1 MGP_LPJ_G0015006.1 mouse_genomes_project 1 35464498 35473325 + D430040D24Rik processed_transcript antisense MGP_LPJ_T0012072.1 MGP_LPJ_G0010163.1 mouse_genomes_project 1 64088526 64088772 + processed_pseudogene processed_pseudogene MGP_LPJ_T0022501.1 MGP_LPJ_G0016497.1 mouse_genomes_project 1 157120368 157140280 + MGP_LPJ_P0022501 Ivns1abp protein_coding protein_coding MGP_LPJ_T0022502.1 MGP_LPJ_G0016497.1 mouse_genomes_project 1 157120400 157132623 + MGP_LPJ_P0022502 Ivns1abp protein_coding protein_coding MGP_LPJ_T0022503.1 MGP_LPJ_G0016497.1 mouse_genomes_project 1 157120409 157140273 + MGP_LPJ_P0022503 Ivns1abp protein_coding protein_coding MGP_LPJ_T0022504.1 MGP_LPJ_G0016497.1 mouse_genomes_project 1 157120469 157139223 + MGP_LPJ_P0022504 Ivns1abp protein_coding nonsense_mediated_decay MGP_LPJ_T0022505.1 MGP_LPJ_G0016497.1 mouse_genomes_project 1 157137097 157137885 + MGP_LPJ_P0022505 Ivns1abp protein_coding protein_coding MGP_LPJ_T0012037.1 MGP_LPJ_G0010128.1 mouse_genomes_project 1 53339267 53339590 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012105.1 MGP_LPJ_G0010196.1 mouse_genomes_project 1 77347699 77349398 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021294.1 MGP_LPJ_G0016239.1 mouse_genomes_project 1 95399214 95400270 + MGP_LPJ_P0021294 Olfr12 protein_coding protein_coding MGP_LPJ_T0002797.1 MGP_LPJ_G0002658.1 mouse_genomes_project 1 33166121 33171029 - Gm28306 antisense antisense MGP_LPJ_T0011971.1 MGP_LPJ_G0010062.1 mouse_genomes_project 1 33364675 33366072 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000641.1 MGP_LPJ_G0000576.1 mouse_genomes_project 1 130381465 130384162 - TEC TEC MGP_LPJ_T0022568.1 MGP_LPJ_G0016510.1 mouse_genomes_project 1 158728970 158800570 - MGP_LPJ_P0022568 Smg7 protein_coding protein_coding MGP_LPJ_T0022569.1 MGP_LPJ_G0016510.1 mouse_genomes_project 1 158728971 158773689 - MGP_LPJ_P0022569 Smg7 protein_coding protein_coding MGP_LPJ_T0022570.1 MGP_LPJ_G0016510.1 mouse_genomes_project 1 158730850 158800594 - MGP_LPJ_P0022570 Smg7 protein_coding protein_coding MGP_LPJ_T0022571.1 MGP_LPJ_G0016510.1 mouse_genomes_project 1 158737238 158766736 - Smg7 protein_coding processed_transcript MGP_LPJ_T0022572.1 MGP_LPJ_G0016510.1 mouse_genomes_project 1 158737260 158741633 - Smg7 protein_coding processed_transcript MGP_LPJ_T0022573.1 MGP_LPJ_G0016510.1 mouse_genomes_project 1 158738538 158741548 - Smg7 protein_coding retained_intron MGP_LPJ_T0023306.1 MGP_LPJ_G0016662.1 mouse_genomes_project 1 178115973 178120852 + MGP_LPJ_P0023306 Nr1i3 protein_coding protein_coding MGP_LPJ_T0023307.1 MGP_LPJ_G0016662.1 mouse_genomes_project 1 178115974 178120850 + MGP_LPJ_P0023307 Nr1i3 protein_coding protein_coding MGP_LPJ_T0023308.1 MGP_LPJ_G0016662.1 mouse_genomes_project 1 178115989 178122709 + MGP_LPJ_P0023308 Nr1i3 protein_coding protein_coding MGP_LPJ_T0023309.1 MGP_LPJ_G0016662.1 mouse_genomes_project 1 178115997 178121008 + Nr1i3 protein_coding retained_intron MGP_LPJ_T0023310.1 MGP_LPJ_G0016662.1 mouse_genomes_project 1 178116005 178120852 + MGP_LPJ_P0023310 Nr1i3 protein_coding nonsense_mediated_decay MGP_LPJ_T0023311.1 MGP_LPJ_G0016662.1 mouse_genomes_project 1 178116024 178121200 + Nr1i3 protein_coding retained_intron MGP_LPJ_T0023312.1 MGP_LPJ_G0016662.1 mouse_genomes_project 1 178116024 178120851 + MGP_LPJ_P0023312 Nr1i3 protein_coding protein_coding MGP_LPJ_T0023313.1 MGP_LPJ_G0016662.1 mouse_genomes_project 1 178116355 178120725 + Nr1i3 protein_coding retained_intron MGP_LPJ_T0002902.1 MGP_LPJ_G0002737.1 mouse_genomes_project 1 135167830 135259028 + antisense antisense MGP_LPJ_T0012011.1 MGP_LPJ_G0010102.1 mouse_genomes_project 1 45390818 45391082 - processed_pseudogene processed_pseudogene MGP_LPJ_T0019011.1 MGP_LPJ_G0015796.1 mouse_genomes_project 1 20247185 20761028 - MGP_LPJ_P0019011 protein_coding protein_coding MGP_LPJ_T0019012.1 MGP_LPJ_G0015796.1 mouse_genomes_project 1 20247185 20761028 - MGP_LPJ_P0019012 protein_coding protein_coding MGP_LPJ_T0019013.1 MGP_LPJ_G0015796.1 mouse_genomes_project 1 20247185 20761028 - MGP_LPJ_P0019013 protein_coding protein_coding MGP_LPJ_T0019014.1 MGP_LPJ_G0015796.1 mouse_genomes_project 1 20247185 20761028 - MGP_LPJ_P0019014 protein_coding protein_coding MGP_LPJ_T0019015.1 MGP_LPJ_G0015796.1 mouse_genomes_project 1 20247185 20761028 - MGP_LPJ_P0019015 protein_coding protein_coding MGP_LPJ_T0019016.1 MGP_LPJ_G0015796.1 mouse_genomes_project 1 20247849 20277298 - MGP_LPJ_P0019016 protein_coding protein_coding MGP_LPJ_T0019017.1 MGP_LPJ_G0015796.1 mouse_genomes_project 1 20249359 20761028 - MGP_LPJ_P0019017 protein_coding unknown_likely_coding MGP_LPJ_T0019018.1 MGP_LPJ_G0015796.1 mouse_genomes_project 1 20249359 20405060 - MGP_LPJ_P0019018 protein_coding protein_coding MGP_LPJ_T0019019.1 MGP_LPJ_G0015796.1 mouse_genomes_project 1 20410511 20761028 - MGP_LPJ_P0019019 protein_coding protein_coding MGP_LPJ_T0011980.1 MGP_LPJ_G0010071.1 mouse_genomes_project 1 35511948 35512293 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016913.1 MGP_LPJ_G0015003.1 mouse_genomes_project 1 7004860 7089045 - 2610203C22Rik processed_transcript antisense MGP_LPJ_T0016914.1 MGP_LPJ_G0015003.1 mouse_genomes_project 1 7007519 7089090 - 2610203C22Rik processed_transcript retained_intron MGP_LPJ_T0016915.1 MGP_LPJ_G0015003.1 mouse_genomes_project 1 7055510 7089097 - 2610203C22Rik processed_transcript antisense MGP_LPJ_T0016916.1 MGP_LPJ_G0015003.1 mouse_genomes_project 1 7056115 7089128 - 2610203C22Rik processed_transcript antisense MGP_LPJ_T0016917.1 MGP_LPJ_G0015003.1 mouse_genomes_project 1 7058518 7089117 - 2610203C22Rik processed_transcript antisense MGP_LPJ_T0023850.1 MGP_LPJ_G0016797.1 mouse_genomes_project 1 188792782 188802195 + MGP_LPJ_P0023850 9130409I23Rik protein_coding protein_coding MGP_LPJ_T0022358.1 MGP_LPJ_G0016468.1 mouse_genomes_project 1 144002068 144006938 - MGP_LPJ_P0022358 2310009B15Rik protein_coding protein_coding MGP_LPJ_T0022359.1 MGP_LPJ_G0016468.1 mouse_genomes_project 1 144002069 144004436 - 2310009B15Rik protein_coding retained_intron MGP_LPJ_T0022360.1 MGP_LPJ_G0016468.1 mouse_genomes_project 1 144002118 144006933 - MGP_LPJ_P0022360 2310009B15Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0016934.1 MGP_LPJ_G0015012.1 mouse_genomes_project 1 52081555 52160923 + Gm28177 processed_transcript processed_transcript MGP_LPJ_T0000836.1 MGP_LPJ_G0000766.1 mouse_genomes_project 1 201777079 201779225 + TEC TEC MGP_LPJ_T0002779.1 MGP_LPJ_G0002645.1 mouse_genomes_project 1 10936275 10947888 + Gm29570 antisense antisense MGP_LPJ_T0005741.1 MGP_LPJ_G0004822.1 mouse_genomes_project 1 46607167 46608118 - Gm28151 lincRNA lincRNA MGP_LPJ_T0016983.1 MGP_LPJ_G0015028.1 mouse_genomes_project 1 141446264 141449868 - 9230116N13Rik processed_transcript antisense MGP_LPJ_T0016984.1 MGP_LPJ_G0015028.1 mouse_genomes_project 1 141447191 141449843 - 9230116N13Rik processed_transcript retained_intron MGP_LPJ_T0019092.1 MGP_LPJ_G0015812.1 mouse_genomes_project 1 29684285 29717185 + MGP_LPJ_P0019092 Lgsn protein_coding protein_coding MGP_LPJ_T0019093.1 MGP_LPJ_G0015812.1 mouse_genomes_project 1 29698690 29717185 + MGP_LPJ_P0019093 Lgsn protein_coding protein_coding MGP_LPJ_T0019855.1 MGP_LPJ_G0015959.1 mouse_genomes_project 1 58721332 58754566 + MGP_LPJ_P0019855 Sgol2a protein_coding protein_coding MGP_LPJ_T0019856.1 MGP_LPJ_G0015959.1 mouse_genomes_project 1 58751382 58754565 + Sgol2a protein_coding retained_intron MGP_LPJ_T0099984.1 MGP_LPJ_G0038247.1 mouse_genomes_project 1 60580156 60580237 + Gm26287 snoRNA snoRNA MGP_LPJ_T0012100.1 MGP_LPJ_G0010191.1 mouse_genomes_project 1 73542216 73542695 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012237.1 MGP_LPJ_G0010328.1 mouse_genomes_project 1 134879913 134880322 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101693.1 MGP_LPJ_G0039731.1 mouse_genomes_project 1 90559550 90560384 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002807.1 MGP_LPJ_G0002666.1 mouse_genomes_project 1 36860764 36868158 + Gm26805 antisense antisense MGP_LPJ_T0000688.1 MGP_LPJ_G0000621.1 mouse_genomes_project 1 143059104 143064326 + TEC TEC MGP_LPJ_T0019270.1 MGP_LPJ_G0015844.1 mouse_genomes_project 1 35611267 35613465 + MGP_LPJ_P0019270 Cox5b protein_coding protein_coding MGP_LPJ_T0019271.1 MGP_LPJ_G0015844.1 mouse_genomes_project 1 35611393 35613170 + MGP_LPJ_P0019271 Cox5b protein_coding protein_coding MGP_LPJ_T0019272.1 MGP_LPJ_G0015844.1 mouse_genomes_project 1 35611411 35612334 + Cox5b protein_coding retained_intron MGP_LPJ_T0019273.1 MGP_LPJ_G0015844.1 mouse_genomes_project 1 35611425 35612291 + Cox5b protein_coding retained_intron MGP_LPJ_T0019274.1 MGP_LPJ_G0015844.1 mouse_genomes_project 1 35611427 35613169 + Cox5b protein_coding processed_transcript MGP_LPJ_T0019275.1 MGP_LPJ_G0015844.1 mouse_genomes_project 1 35611471 35613170 + MGP_LPJ_P0019275 Cox5b protein_coding protein_coding MGP_LPJ_T0012201.1 MGP_LPJ_G0010292.1 mouse_genomes_project 1 120585122 120585522 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021688.1 MGP_LPJ_G0016324.1 mouse_genomes_project 1 124330449 124408980 - MGP_LPJ_P0021688 Steap3 protein_coding protein_coding MGP_LPJ_T0021689.1 MGP_LPJ_G0016324.1 mouse_genomes_project 1 124368404 124414807 - MGP_LPJ_P0021689 Steap3 protein_coding protein_coding MGP_LPJ_T0021690.1 MGP_LPJ_G0016324.1 mouse_genomes_project 1 124370666 124414146 - MGP_LPJ_P0021690 Steap3 protein_coding protein_coding MGP_LPJ_T0021691.1 MGP_LPJ_G0016324.1 mouse_genomes_project 1 124371685 124413953 - MGP_LPJ_P0021691 Steap3 protein_coding protein_coding MGP_LPJ_T0000399.1 MGP_LPJ_G0000337.1 mouse_genomes_project 1 4467269 4471301 + TEC TEC MGP_LPJ_T0021562.1 MGP_LPJ_G0016298.1 mouse_genomes_project 1 110776598 110784229 - MGP_LPJ_P0021562 Serpinb3c protein_coding protein_coding MGP_LPJ_T0012004.1 MGP_LPJ_G0010095.1 mouse_genomes_project 1 44907006 44907530 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009483.1 MGP_LPJ_G0007601.1 mouse_genomes_project 1 9944471 9944592 + Mir6341 miRNA miRNA MGP_LPJ_T0022670.1 MGP_LPJ_G0016531.1 mouse_genomes_project 1 161340220 161489631 - MGP_LPJ_P0022670 Xpr1 protein_coding protein_coding MGP_LPJ_T0022671.1 MGP_LPJ_G0016531.1 mouse_genomes_project 1 161343501 161489709 - MGP_LPJ_P0022671 Xpr1 protein_coding protein_coding MGP_LPJ_T0022672.1 MGP_LPJ_G0016531.1 mouse_genomes_project 1 161346702 161378517 - Xpr1 protein_coding retained_intron MGP_LPJ_T0022673.1 MGP_LPJ_G0016531.1 mouse_genomes_project 1 161347187 161489717 - MGP_LPJ_P0022673 Xpr1 protein_coding protein_coding MGP_LPJ_T0022674.1 MGP_LPJ_G0016531.1 mouse_genomes_project 1 161353809 161356537 - Xpr1 protein_coding retained_intron MGP_LPJ_T0022675.1 MGP_LPJ_G0016531.1 mouse_genomes_project 1 161392023 161489697 - Xpr1 protein_coding retained_intron MGP_LPJ_T0022676.1 MGP_LPJ_G0016531.1 mouse_genomes_project 1 161453811 161456876 - Xpr1 protein_coding processed_transcript MGP_LPJ_T0022942.1 MGP_LPJ_G0016576.1 mouse_genomes_project 1 168403213 168727596 - MGP_LPJ_P0022942 Dnm3 protein_coding protein_coding MGP_LPJ_T0022943.1 MGP_LPJ_G0016576.1 mouse_genomes_project 1 168403218 168406465 - Dnm3 protein_coding retained_intron MGP_LPJ_T0022944.1 MGP_LPJ_G0016576.1 mouse_genomes_project 1 168408049 168925222 - MGP_LPJ_P0022944 Dnm3 protein_coding protein_coding MGP_LPJ_T0022945.1 MGP_LPJ_G0016576.1 mouse_genomes_project 1 168410959 168925222 - MGP_LPJ_P0022945 Dnm3 protein_coding protein_coding MGP_LPJ_T0022946.1 MGP_LPJ_G0016576.1 mouse_genomes_project 1 168412262 168416761 - Dnm3 protein_coding retained_intron MGP_LPJ_T0022947.1 MGP_LPJ_G0016576.1 mouse_genomes_project 1 168427178 168727540 - MGP_LPJ_P0022947 Dnm3 protein_coding protein_coding MGP_LPJ_T0022948.1 MGP_LPJ_G0016576.1 mouse_genomes_project 1 168437500 168566250 - Dnm3 protein_coding retained_intron MGP_LPJ_T0022949.1 MGP_LPJ_G0016576.1 mouse_genomes_project 1 168705166 168727555 - Dnm3 protein_coding processed_transcript MGP_LPJ_T0022950.1 MGP_LPJ_G0016576.1 mouse_genomes_project 1 168714501 168747544 - Dnm3 protein_coding processed_transcript MGP_LPJ_T0022951.1 MGP_LPJ_G0016576.1 mouse_genomes_project 1 168754500 168925200 - Dnm3 protein_coding retained_intron MGP_LPJ_T0022952.1 MGP_LPJ_G0016576.1 mouse_genomes_project 1 168828839 168870769 - Dnm3 protein_coding processed_transcript MGP_LPJ_T0022953.1 MGP_LPJ_G0016576.1 mouse_genomes_project 1 168849607 168852085 - Dnm3 protein_coding retained_intron MGP_LPJ_T0024134.1 MGP_LPJ_G0016854.1 mouse_genomes_project 1 199260481 199272679 + MGP_LPJ_P0024134 Nsl1 protein_coding protein_coding MGP_LPJ_T0024135.1 MGP_LPJ_G0016854.1 mouse_genomes_project 1 199260493 199274412 + MGP_LPJ_P0024135 Nsl1 protein_coding protein_coding MGP_LPJ_T0024136.1 MGP_LPJ_G0016854.1 mouse_genomes_project 1 199260500 199283985 + MGP_LPJ_P0024136 Nsl1 protein_coding protein_coding MGP_LPJ_T0005709.1 MGP_LPJ_G0004805.1 mouse_genomes_project 1 35227019 35227735 + 4930403P22Rik lincRNA lincRNA MGP_LPJ_T0000645.1 MGP_LPJ_G0000580.1 mouse_genomes_project 1 131822483 131827244 + TEC TEC MGP_LPJ_T0100049.1 MGP_LPJ_G0038312.1 mouse_genomes_project 1 196664858 196664989 - Gm25095 snoRNA snoRNA MGP_LPJ_T0012006.1 MGP_LPJ_G0010097.1 mouse_genomes_project 1 44991760 44992494 + processed_pseudogene processed_pseudogene MGP_LPJ_T0020929.1 MGP_LPJ_G0016156.1 mouse_genomes_project 1 88387457 88397993 + MGP_LPJ_P0020929 2810459M11Rik protein_coding protein_coding MGP_LPJ_T0020930.1 MGP_LPJ_G0016156.1 mouse_genomes_project 1 88387457 88395887 + MGP_LPJ_P0020930 2810459M11Rik protein_coding protein_coding MGP_LPJ_T0098785.1 MGP_LPJ_G0037048.1 mouse_genomes_project 1 142077451 142077511 - Gm23763 snRNA snRNA MGP_LPJ_T0005864.1 MGP_LPJ_G0004920.1 mouse_genomes_project 1 95499341 95502310 - Gm29483 lincRNA lincRNA MGP_LPJ_T0003000.1 MGP_LPJ_G0002816.1 mouse_genomes_project 1 195330496 195363786 - Gm38155 antisense antisense MGP_LPJ_T0012316.1 MGP_LPJ_G0010407.1 mouse_genomes_project 1 172198816 172199606 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011948.1 MGP_LPJ_G0010039.1 mouse_genomes_project 1 28383303 28383925 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012275.1 MGP_LPJ_G0010366.1 mouse_genomes_project 1 154530141 154530613 - processed_pseudogene processed_pseudogene MGP_LPJ_T0019833.1 MGP_LPJ_G0015957.1 mouse_genomes_project 1 58497917 58610463 + MGP_LPJ_P0019833 Spats2l protein_coding protein_coding MGP_LPJ_T0019834.1 MGP_LPJ_G0015957.1 mouse_genomes_project 1 58498004 58604418 + Spats2l protein_coding retained_intron MGP_LPJ_T0019835.1 MGP_LPJ_G0015957.1 mouse_genomes_project 1 58498056 58626804 + MGP_LPJ_P0019835 Spats2l protein_coding protein_coding MGP_LPJ_T0019836.1 MGP_LPJ_G0015957.1 mouse_genomes_project 1 58498174 58524180 + Spats2l protein_coding retained_intron MGP_LPJ_T0019837.1 MGP_LPJ_G0015957.1 mouse_genomes_project 1 58498355 58610531 + MGP_LPJ_P0019837 Spats2l protein_coding protein_coding MGP_LPJ_T0019838.1 MGP_LPJ_G0015957.1 mouse_genomes_project 1 58498499 58662702 + MGP_LPJ_P0019838 Spats2l protein_coding protein_coding MGP_LPJ_T0019839.1 MGP_LPJ_G0015957.1 mouse_genomes_project 1 58498645 58581090 + Spats2l protein_coding retained_intron MGP_LPJ_T0019840.1 MGP_LPJ_G0015957.1 mouse_genomes_project 1 58498667 58556187 + Spats2l protein_coding retained_intron MGP_LPJ_T0019841.1 MGP_LPJ_G0015957.1 mouse_genomes_project 1 58498672 58523322 + Spats2l protein_coding retained_intron MGP_LPJ_T0019842.1 MGP_LPJ_G0015957.1 mouse_genomes_project 1 58521413 58671136 + MGP_LPJ_P0019842 Spats2l protein_coding protein_coding MGP_LPJ_T0019843.1 MGP_LPJ_G0015957.1 mouse_genomes_project 1 58626765 58665055 + Spats2l protein_coding retained_intron MGP_LPJ_T0000555.1 MGP_LPJ_G0000490.1 mouse_genomes_project 1 76690532 76692122 + TEC TEC MGP_LPJ_T0002780.1 MGP_LPJ_G0002646.1 mouse_genomes_project 1 12379082 12405065 + Gm9947 antisense antisense MGP_LPJ_T0002781.1 MGP_LPJ_G0002646.1 mouse_genomes_project 1 12381605 12384530 + Gm9947 antisense antisense MGP_LPJ_T0012139.1 MGP_LPJ_G0010230.1 mouse_genomes_project 1 93991482 93993454 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098697.1 MGP_LPJ_G0036964.1 mouse_genomes_project 1 197280927 197281584 - 2900042K21Rik sense_overlapping sense_overlapping MGP_LPJ_T0022495.1 MGP_LPJ_G0016496.1 mouse_genomes_project 1 156242726 156698668 - MGP_LPJ_P0022495 Hmcn1 protein_coding protein_coding MGP_LPJ_T0022496.1 MGP_LPJ_G0016496.1 mouse_genomes_project 1 156243730 156698668 - MGP_LPJ_P0022496 Hmcn1 protein_coding protein_coding MGP_LPJ_T0022497.1 MGP_LPJ_G0016496.1 mouse_genomes_project 1 156243887 156262779 - MGP_LPJ_P0022497 Hmcn1 protein_coding protein_coding MGP_LPJ_T0022498.1 MGP_LPJ_G0016496.1 mouse_genomes_project 1 156243914 156245777 - Hmcn1 protein_coding retained_intron MGP_LPJ_T0022499.1 MGP_LPJ_G0016496.1 mouse_genomes_project 1 156256980 156260162 - Hmcn1 protein_coding processed_transcript MGP_LPJ_T0022500.1 MGP_LPJ_G0016496.1 mouse_genomes_project 1 156568569 156699053 - Hmcn1 protein_coding retained_intron MGP_LPJ_T0009518.1 MGP_LPJ_G0007636.1 mouse_genomes_project 1 76303060 76303137 - Gm25035 miRNA miRNA MGP_LPJ_T0002996.1 MGP_LPJ_G0002812.1 mouse_genomes_project 1 193316575 193330173 - 9630028B13Rik antisense antisense MGP_LPJ_T0009540.1 MGP_LPJ_G0007658.1 mouse_genomes_project 1 108952607 108952703 + Gm22426 miRNA miRNA MGP_LPJ_T0021446.1 MGP_LPJ_G0016269.1 mouse_genomes_project 1 96701794 96772603 + protein_coding processed_transcript MGP_LPJ_T0021448.1 MGP_LPJ_G0016269.1 mouse_genomes_project 1 96702314 96772817 + MGP_LPJ_P0021448 protein_coding protein_coding MGP_LPJ_T0098811.1 MGP_LPJ_G0037074.1 mouse_genomes_project 1 192424523 192424621 - Gm23349 snRNA snRNA MGP_LPJ_T0099969.1 MGP_LPJ_G0038232.1 mouse_genomes_project 1 33992733 33992862 - Gm25096 snoRNA snoRNA MGP_LPJ_T0012141.1 MGP_LPJ_G0010232.1 mouse_genomes_project 1 94198197 94200474 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000451.1 MGP_LPJ_G0000387.1 mouse_genomes_project 1 23823242 23826076 - TEC TEC MGP_LPJ_T0005722.1 MGP_LPJ_G0004814.1 mouse_genomes_project 1 41495326 41495789 - Gm29664 lincRNA lincRNA MGP_LPJ_T0005697.1 MGP_LPJ_G0004795.1 mouse_genomes_project 1 33057066 33057944 - Gm37958 lincRNA lincRNA MGP_LPJ_T0005946.1 MGP_LPJ_G0004985.1 mouse_genomes_project 1 143076871 143080259 + A430106G13Rik lincRNA lincRNA MGP_LPJ_T0012159.1 MGP_LPJ_G0010250.1 mouse_genomes_project 1 104550670 104551118 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100008.1 MGP_LPJ_G0038271.1 mouse_genomes_project 1 111427596 111427728 + Gm22438 snoRNA snoRNA MGP_LPJ_T0098457.1 MGP_LPJ_G0036737.1 mouse_genomes_project 1 144120542 144122133 + 4930596I21Rik sense_intronic sense_intronic MGP_LPJ_T0005782.1 MGP_LPJ_G0004853.1 mouse_genomes_project 1 64138927 64151349 + Gm20342 lincRNA lincRNA MGP_LPJ_T0020913.1 MGP_LPJ_G0016152.1 mouse_genomes_project 1 88225679 88240113 + MGP_LPJ_P0020913 Itm2c protein_coding protein_coding MGP_LPJ_T0020914.1 MGP_LPJ_G0016152.1 mouse_genomes_project 1 88226016 88240127 + MGP_LPJ_P0020914 Itm2c protein_coding protein_coding MGP_LPJ_T0020915.1 MGP_LPJ_G0016152.1 mouse_genomes_project 1 88237598 88239229 + Itm2c protein_coding retained_intron MGP_LPJ_T0000815.1 MGP_LPJ_G0000746.1 mouse_genomes_project 1 194025047 194025240 - TEC TEC MGP_LPJ_T0019819.1 MGP_LPJ_G0015954.1 mouse_genomes_project 1 58086301 58095293 + MGP_LPJ_P0019819 1700066M21Rik protein_coding protein_coding MGP_LPJ_T0019820.1 MGP_LPJ_G0015954.1 mouse_genomes_project 1 58086314 58088844 + 1700066M21Rik protein_coding processed_transcript MGP_LPJ_T0019821.1 MGP_LPJ_G0015954.1 mouse_genomes_project 1 58086321 58088760 + 1700066M21Rik protein_coding processed_transcript MGP_LPJ_T0020327.1 MGP_LPJ_G0016043.1 mouse_genomes_project 1 73709477 73760733 - MGP_LPJ_P0020327 Mreg protein_coding unknown_likely_coding MGP_LPJ_T0023196.1 MGP_LPJ_G0016630.1 mouse_genomes_project 1 173986074 174006529 + MGP_LPJ_P0023196 Aldh9a1 protein_coding protein_coding MGP_LPJ_T0023197.1 MGP_LPJ_G0016630.1 mouse_genomes_project 1 173986319 173990779 + Aldh9a1 protein_coding processed_transcript MGP_LPJ_T0023198.1 MGP_LPJ_G0016630.1 mouse_genomes_project 1 173986395 173992181 + Aldh9a1 protein_coding retained_intron MGP_LPJ_T0023199.1 MGP_LPJ_G0016630.1 mouse_genomes_project 1 174002150 174005644 + Aldh9a1 protein_coding retained_intron MGP_LPJ_T0002873.1 MGP_LPJ_G0002715.1 mouse_genomes_project 1 89668409 89669103 - Efhd1os antisense antisense MGP_LPJ_T0009502.1 MGP_LPJ_G0007620.1 mouse_genomes_project 1 44696051 44696192 + miRNA miRNA MGP_LPJ_T0020696.1 MGP_LPJ_G0016108.1 mouse_genomes_project 1 77232910 77248899 + MGP_LPJ_P0020696 Stk11ip protein_coding protein_coding MGP_LPJ_T0020697.1 MGP_LPJ_G0016108.1 mouse_genomes_project 1 77232933 77248466 + MGP_LPJ_P0020697 Stk11ip protein_coding protein_coding MGP_LPJ_T0020698.1 MGP_LPJ_G0016108.1 mouse_genomes_project 1 77233172 77248469 + Stk11ip protein_coding retained_intron MGP_LPJ_T0020699.1 MGP_LPJ_G0016108.1 mouse_genomes_project 1 77233192 77238492 + Stk11ip protein_coding retained_intron MGP_LPJ_T0020700.1 MGP_LPJ_G0016108.1 mouse_genomes_project 1 77239684 77240869 + Stk11ip protein_coding retained_intron MGP_LPJ_T0020701.1 MGP_LPJ_G0016108.1 mouse_genomes_project 1 77240019 77248469 + Stk11ip protein_coding retained_intron MGP_LPJ_T0020702.1 MGP_LPJ_G0016108.1 mouse_genomes_project 1 77241059 77243718 + Stk11ip protein_coding retained_intron MGP_LPJ_T0020703.1 MGP_LPJ_G0016108.1 mouse_genomes_project 1 77243911 77245638 + Stk11ip protein_coding retained_intron MGP_LPJ_T0020704.1 MGP_LPJ_G0016108.1 mouse_genomes_project 1 77244418 77245165 + Stk11ip protein_coding processed_transcript MGP_LPJ_T0012146.1 MGP_LPJ_G0010237.1 mouse_genomes_project 1 98203072 98203920 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011873.1 MGP_LPJ_G0009964.1 mouse_genomes_project 1 3640200 3640811 + processed_pseudogene processed_pseudogene MGP_LPJ_T0020959.1 MGP_LPJ_G0016162.1 mouse_genomes_project 1 88703061 88717722 - MGP_LPJ_P0020959 Ncl protein_coding protein_coding MGP_LPJ_T0020960.1 MGP_LPJ_G0016162.1 mouse_genomes_project 1 88708847 88717686 - Ncl protein_coding retained_intron MGP_LPJ_T0020961.1 MGP_LPJ_G0016162.1 mouse_genomes_project 1 88708848 88709564 - Ncl protein_coding retained_intron MGP_LPJ_T0020962.1 MGP_LPJ_G0016162.1 mouse_genomes_project 1 88708916 88710416 - Ncl protein_coding retained_intron MGP_LPJ_T0020963.1 MGP_LPJ_G0016162.1 mouse_genomes_project 1 88709453 88710659 - Ncl protein_coding retained_intron MGP_LPJ_T0020964.1 MGP_LPJ_G0016162.1 mouse_genomes_project 1 88715663 88717291 - MGP_LPJ_P0020964 Ncl protein_coding protein_coding MGP_LPJ_T0012169.1 MGP_LPJ_G0010260.1 mouse_genomes_project 1 108952457 108952732 + processed_pseudogene processed_pseudogene MGP_LPJ_T0020838.1 MGP_LPJ_G0016137.1 mouse_genomes_project 1 85082608 85107729 - MGP_LPJ_P0020838 Slc19a3 protein_coding protein_coding MGP_LPJ_T0020839.1 MGP_LPJ_G0016137.1 mouse_genomes_project 1 85082609 85089858 - Slc19a3 protein_coding processed_transcript MGP_LPJ_T0020840.1 MGP_LPJ_G0016137.1 mouse_genomes_project 1 85083885 85107712 - MGP_LPJ_P0020840 Slc19a3 protein_coding protein_coding MGP_LPJ_T0009493.1 MGP_LPJ_G0007611.1 mouse_genomes_project 1 28431237 28431347 + Gm23771 miRNA miRNA MGP_LPJ_T0012013.1 MGP_LPJ_G0010104.1 mouse_genomes_project 1 46656970 46657267 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000635.1 MGP_LPJ_G0000570.1 mouse_genomes_project 1 127749364 127752605 - TEC TEC MGP_LPJ_T0009536.1 MGP_LPJ_G0007654.1 mouse_genomes_project 1 96148808 96148936 + Mir6345 miRNA miRNA MGP_LPJ_T0011882.1 MGP_LPJ_G0009973.1 mouse_genomes_project 1 4637367 4638379 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011913.1 MGP_LPJ_G0010004.1 mouse_genomes_project 1 15118543 15119015 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011952.1 MGP_LPJ_G0010043.1 mouse_genomes_project 1 29471569 29472265 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099963.1 MGP_LPJ_G0038226.1 mouse_genomes_project 1 18694603 18694736 - Gm24723 snoRNA snoRNA MGP_LPJ_T0000833.1 MGP_LPJ_G0000763.1 mouse_genomes_project 1 201529554 201531776 - TEC TEC MGP_LPJ_T0100027.1 MGP_LPJ_G0038290.1 mouse_genomes_project 1 160100285 160100390 - Gm25336 snoRNA snoRNA MGP_LPJ_T0000486.1 MGP_LPJ_G0000421.1 mouse_genomes_project 1 36641805 36643731 + TEC TEC MGP_LPJ_T0012132.1 MGP_LPJ_G0010223.1 mouse_genomes_project 1 89935193 89935316 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000805.1 MGP_LPJ_G0000737.1 mouse_genomes_project 1 189764353 189766578 - TEC TEC MGP_LPJ_T0019545.1 MGP_LPJ_G0015900.1 mouse_genomes_project 1 43445017 43462099 - MGP_LPJ_P0019545 Tex30 protein_coding protein_coding MGP_LPJ_T0019546.1 MGP_LPJ_G0015900.1 mouse_genomes_project 1 43445020 43462146 - MGP_LPJ_P0019546 Tex30 protein_coding protein_coding MGP_LPJ_T0019547.1 MGP_LPJ_G0015900.1 mouse_genomes_project 1 43445214 43462070 - MGP_LPJ_P0019547 Tex30 protein_coding protein_coding MGP_LPJ_T0019548.1 MGP_LPJ_G0015900.1 mouse_genomes_project 1 43445214 43462051 - MGP_LPJ_P0019548 Tex30 protein_coding protein_coding MGP_LPJ_T0019549.1 MGP_LPJ_G0015900.1 mouse_genomes_project 1 43445264 43462131 - MGP_LPJ_P0019549 Tex30 protein_coding protein_coding MGP_LPJ_T0019550.1 MGP_LPJ_G0015900.1 mouse_genomes_project 1 43445265 43462149 - MGP_LPJ_P0019550 Tex30 protein_coding protein_coding MGP_LPJ_T0019551.1 MGP_LPJ_G0015900.1 mouse_genomes_project 1 43445271 43461380 - MGP_LPJ_P0019551 Tex30 protein_coding protein_coding MGP_LPJ_T0019552.1 MGP_LPJ_G0015900.1 mouse_genomes_project 1 43445433 43462141 - MGP_LPJ_P0019552 Tex30 protein_coding protein_coding MGP_LPJ_T0019553.1 MGP_LPJ_G0015900.1 mouse_genomes_project 1 43446305 43462109 - MGP_LPJ_P0019553 Tex30 protein_coding protein_coding MGP_LPJ_T0019554.1 MGP_LPJ_G0015900.1 mouse_genomes_project 1 43446421 43461721 - MGP_LPJ_P0019554 Tex30 protein_coding protein_coding MGP_LPJ_T0019555.1 MGP_LPJ_G0015900.1 mouse_genomes_project 1 43446906 43462122 - MGP_LPJ_P0019555 Tex30 protein_coding protein_coding MGP_LPJ_T0019556.1 MGP_LPJ_G0015900.1 mouse_genomes_project 1 43446912 43462145 - MGP_LPJ_P0019556 Tex30 protein_coding protein_coding MGP_LPJ_T0019557.1 MGP_LPJ_G0015900.1 mouse_genomes_project 1 43446918 43459694 - MGP_LPJ_P0019557 Tex30 protein_coding protein_coding MGP_LPJ_T0022879.1 MGP_LPJ_G0016564.1 mouse_genomes_project 1 167343337 167375763 - MGP_LPJ_P0022879 Zbtb37 protein_coding protein_coding MGP_LPJ_T0022880.1 MGP_LPJ_G0016564.1 mouse_genomes_project 1 167349200 167375763 - MGP_LPJ_P0022880 Zbtb37 protein_coding nonsense_mediated_decay MGP_LPJ_T0022881.1 MGP_LPJ_G0016564.1 mouse_genomes_project 1 167349206 167375748 - MGP_LPJ_P0022881 Zbtb37 protein_coding nonsense_mediated_decay MGP_LPJ_T0022882.1 MGP_LPJ_G0016564.1 mouse_genomes_project 1 167358177 167375176 - MGP_LPJ_P0022882 Zbtb37 protein_coding protein_coding MGP_LPJ_T0022883.1 MGP_LPJ_G0016564.1 mouse_genomes_project 1 167359681 167375762 - MGP_LPJ_P0022883 Zbtb37 protein_coding protein_coding MGP_LPJ_T0022884.1 MGP_LPJ_G0016564.1 mouse_genomes_project 1 167359845 167375201 - MGP_LPJ_P0022884 Zbtb37 protein_coding protein_coding MGP_LPJ_T0022885.1 MGP_LPJ_G0016564.1 mouse_genomes_project 1 167373352 167375730 - MGP_LPJ_P0022885 Zbtb37 protein_coding protein_coding MGP_LPJ_T0005985.1 MGP_LPJ_G0005015.1 mouse_genomes_project 1 168316437 168326887 + Gm31925 lincRNA lincRNA MGP_LPJ_T0005986.1 MGP_LPJ_G0005015.1 mouse_genomes_project 1 168318084 168329111 + Gm31925 lincRNA lincRNA MGP_LPJ_T0019803.1 MGP_LPJ_G0015949.1 mouse_genomes_project 1 55794787 55806081 + MGP_LPJ_P0019803 Mars2 protein_coding protein_coding MGP_LPJ_T0023702.1 MGP_LPJ_G0016769.1 mouse_genomes_project 1 185885025 185899742 - MGP_LPJ_P0023702 protein_coding nonsense_mediated_decay MGP_LPJ_T0023703.1 MGP_LPJ_G0016769.1 mouse_genomes_project 1 185885085 185892573 - MGP_LPJ_P0023703 protein_coding nonsense_mediated_decay MGP_LPJ_T0023704.1 MGP_LPJ_G0016769.1 mouse_genomes_project 1 185885571 185891359 - MGP_LPJ_P0023704 protein_coding nonsense_mediated_decay MGP_LPJ_T0011914.1 MGP_LPJ_G0010005.1 mouse_genomes_project 1 15161949 15162435 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012064.1 MGP_LPJ_G0010155.1 mouse_genomes_project 1 62086012 62088639 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002794.1 MGP_LPJ_G0002655.1 mouse_genomes_project 1 18950429 18952064 + Gm28287 antisense antisense MGP_LPJ_T0002952.1 MGP_LPJ_G0002777.1 mouse_genomes_project 1 168390159 168449010 + Gm38304 antisense antisense MGP_LPJ_T0019514.1 MGP_LPJ_G0015892.1 mouse_genomes_project 1 42411477 42430182 + MGP_LPJ_P0019514 AI597479 protein_coding protein_coding MGP_LPJ_T0024008.1 MGP_LPJ_G0016832.1 mouse_genomes_project 1 193246361 193296559 + Eprs protein_coding retained_intron MGP_LPJ_T0024009.1 MGP_LPJ_G0016832.1 mouse_genomes_project 1 193246361 193314828 + MGP_LPJ_P0024009 Eprs protein_coding protein_coding MGP_LPJ_T0024010.1 MGP_LPJ_G0016832.1 mouse_genomes_project 1 193246375 193250276 + Eprs protein_coding retained_intron MGP_LPJ_T0024011.1 MGP_LPJ_G0016832.1 mouse_genomes_project 1 193246449 193260303 + Eprs protein_coding retained_intron MGP_LPJ_T0024012.1 MGP_LPJ_G0016832.1 mouse_genomes_project 1 193246501 193265189 + MGP_LPJ_P0024012 Eprs protein_coding nonsense_mediated_decay MGP_LPJ_T0024013.1 MGP_LPJ_G0016832.1 mouse_genomes_project 1 193246515 193314827 + MGP_LPJ_P0024013 Eprs protein_coding unknown_likely_coding MGP_LPJ_T0024014.1 MGP_LPJ_G0016832.1 mouse_genomes_project 1 193248797 193256648 + Eprs protein_coding retained_intron MGP_LPJ_T0024015.1 MGP_LPJ_G0016832.1 mouse_genomes_project 1 193250918 193262231 + MGP_LPJ_P0024015 Eprs protein_coding nonsense_mediated_decay MGP_LPJ_T0024016.1 MGP_LPJ_G0016832.1 mouse_genomes_project 1 193250925 193257667 + Eprs protein_coding retained_intron MGP_LPJ_T0024017.1 MGP_LPJ_G0016832.1 mouse_genomes_project 1 193283376 193289041 + Eprs protein_coding retained_intron MGP_LPJ_T0009559.1 MGP_LPJ_G0007677.1 mouse_genomes_project 1 166606248 166606357 - Mir1927 miRNA miRNA MGP_LPJ_T0012241.1 MGP_LPJ_G0010332.1 mouse_genomes_project 1 137068837 137069679 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000683.1 MGP_LPJ_G0000617.1 mouse_genomes_project 1 143019276 143023144 + TEC TEC MGP_LPJ_T0003027.1 MGP_LPJ_G0002835.1 mouse_genomes_project 1 203281105 203301242 - Gm16897 antisense antisense MGP_LPJ_T0012182.1 MGP_LPJ_G0010273.1 mouse_genomes_project 1 112332553 112334424 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005926.1 MGP_LPJ_G0004969.1 mouse_genomes_project 1 138489131 138493143 + Gm26706 lincRNA lincRNA MGP_LPJ_T0006083.1 MGP_LPJ_G0005092.1 mouse_genomes_project 1 201791496 201794433 - 4631405K08Rik lincRNA lincRNA MGP_LPJ_T0023005.1 MGP_LPJ_G0016585.1 mouse_genomes_project 1 169379552 169403016 - MGP_LPJ_P0023005 Fmo6 protein_coding nonsense_mediated_decay MGP_LPJ_T0023006.1 MGP_LPJ_G0016585.1 mouse_genomes_project 1 169379724 169402719 - MGP_LPJ_P0023006 Fmo6 protein_coding protein_coding MGP_LPJ_T0019909.1 MGP_LPJ_G0015969.1 mouse_genomes_project 1 59290143 59358083 - MGP_LPJ_P0019909 Fam126b protein_coding protein_coding MGP_LPJ_T0019910.1 MGP_LPJ_G0015969.1 mouse_genomes_project 1 59294358 59358026 - MGP_LPJ_P0019910 Fam126b protein_coding protein_coding MGP_LPJ_T0019911.1 MGP_LPJ_G0015969.1 mouse_genomes_project 1 59295081 59335024 - MGP_LPJ_P0019911 Fam126b protein_coding nonsense_mediated_decay MGP_LPJ_T0019912.1 MGP_LPJ_G0015969.1 mouse_genomes_project 1 59296421 59357951 - MGP_LPJ_P0019912 Fam126b protein_coding protein_coding MGP_LPJ_T0019913.1 MGP_LPJ_G0015969.1 mouse_genomes_project 1 59320111 59358035 - MGP_LPJ_P0019913 Fam126b protein_coding protein_coding MGP_LPJ_T0019914.1 MGP_LPJ_G0015969.1 mouse_genomes_project 1 59325257 59358024 - Fam126b protein_coding processed_transcript MGP_LPJ_T0019915.1 MGP_LPJ_G0015969.1 mouse_genomes_project 1 59325284 59358037 - Fam126b protein_coding retained_intron MGP_LPJ_T0019916.1 MGP_LPJ_G0015969.1 mouse_genomes_project 1 59331502 59334290 - Fam126b protein_coding retained_intron MGP_LPJ_T0019917.1 MGP_LPJ_G0015969.1 mouse_genomes_project 1 59334673 59358057 - Fam126b protein_coding retained_intron MGP_LPJ_T0005893.1 MGP_LPJ_G0004943.1 mouse_genomes_project 1 122391546 122398287 + Gm28867 lincRNA lincRNA MGP_LPJ_T0000732.1 MGP_LPJ_G0000665.1 mouse_genomes_project 1 162977424 162981330 - TEC TEC MGP_LPJ_T0018715.1 MGP_LPJ_G0015736.1 mouse_genomes_project 1 3621471 3656031 + MGP_LPJ_P0018715 Fam150a protein_coding protein_coding MGP_LPJ_T0021576.1 MGP_LPJ_G0016304.1 mouse_genomes_project 1 113544779 113559270 + MGP_LPJ_P0021576 Cdh7 protein_coding protein_coding MGP_LPJ_T0021577.1 MGP_LPJ_G0016304.1 mouse_genomes_project 1 113545058 113720385 + MGP_LPJ_P0021577 Cdh7 protein_coding protein_coding MGP_LPJ_T0021578.1 MGP_LPJ_G0016304.1 mouse_genomes_project 1 113545329 113558368 + MGP_LPJ_P0021578 Cdh7 protein_coding protein_coding MGP_LPJ_T0021579.1 MGP_LPJ_G0016304.1 mouse_genomes_project 1 113545354 113557427 + MGP_LPJ_P0021579 Cdh7 protein_coding protein_coding MGP_LPJ_T0021580.1 MGP_LPJ_G0016304.1 mouse_genomes_project 1 113545577 113719435 + MGP_LPJ_P0021580 Cdh7 protein_coding nonsense_mediated_decay MGP_LPJ_T0021581.1 MGP_LPJ_G0016304.1 mouse_genomes_project 1 113545629 113561979 + MGP_LPJ_P0021581 Cdh7 protein_coding protein_coding MGP_LPJ_T0021582.1 MGP_LPJ_G0016304.1 mouse_genomes_project 1 113546085 113719241 + MGP_LPJ_P0021582 Cdh7 protein_coding protein_coding MGP_LPJ_T0021583.1 MGP_LPJ_G0016304.1 mouse_genomes_project 1 113557026 113719429 + MGP_LPJ_P0021583 Cdh7 protein_coding protein_coding MGP_LPJ_T0021584.1 MGP_LPJ_G0016304.1 mouse_genomes_project 1 113669807 113718298 + MGP_LPJ_P0021584 Cdh7 protein_coding protein_coding MGP_LPJ_T0021108.1 MGP_LPJ_G0016192.1 mouse_genomes_project 1 90538874 90700328 + MGP_LPJ_P0021108 protein_coding protein_coding MGP_LPJ_T0021109.1 MGP_LPJ_G0016192.1 mouse_genomes_project 1 90538876 90704614 + MGP_LPJ_P0021109 protein_coding protein_coding MGP_LPJ_T0021110.1 MGP_LPJ_G0016192.1 mouse_genomes_project 1 90538926 90703039 + MGP_LPJ_P0021110 protein_coding nonsense_mediated_decay MGP_LPJ_T0021111.1 MGP_LPJ_G0016192.1 mouse_genomes_project 1 90548073 90704614 + MGP_LPJ_P0021111 protein_coding protein_coding MGP_LPJ_T0005679.1 MGP_LPJ_G0004778.1 mouse_genomes_project 1 14889874 14894575 + Gm28784 lincRNA lincRNA MGP_LPJ_T0012294.1 MGP_LPJ_G0010385.1 mouse_genomes_project 1 161956383 161956689 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006070.1 MGP_LPJ_G0005081.1 mouse_genomes_project 1 198556432 198569845 + Gm29678 lincRNA lincRNA MGP_LPJ_T0101710.1 MGP_LPJ_G0039748.1 mouse_genomes_project 1 110465693 110664510 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0012327.1 MGP_LPJ_G0010418.1 mouse_genomes_project 1 176288566 176289722 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005942.1 MGP_LPJ_G0004982.1 mouse_genomes_project 1 141757192 141790431 + Platr22 lincRNA lincRNA MGP_LPJ_T0022834.1 MGP_LPJ_G0016556.1 mouse_genomes_project 1 165790209 166218479 + MGP_LPJ_P0022834 Tnr protein_coding protein_coding MGP_LPJ_T0022835.1 MGP_LPJ_G0016556.1 mouse_genomes_project 1 165790281 166009669 + Tnr protein_coding retained_intron MGP_LPJ_T0022836.1 MGP_LPJ_G0016556.1 mouse_genomes_project 1 166009383 166211160 + MGP_LPJ_P0022836 Tnr protein_coding protein_coding MGP_LPJ_T0022837.1 MGP_LPJ_G0016556.1 mouse_genomes_project 1 166053651 166133952 + MGP_LPJ_P0022837 Tnr protein_coding protein_coding MGP_LPJ_T0022838.1 MGP_LPJ_G0016556.1 mouse_genomes_project 1 166134006 166147214 + MGP_LPJ_P0022838 Tnr protein_coding protein_coding MGP_LPJ_T0005863.1 MGP_LPJ_G0004919.1 mouse_genomes_project 1 95364362 95366622 + Gm28479 lincRNA lincRNA MGP_LPJ_T0009497.1 MGP_LPJ_G0007615.1 mouse_genomes_project 1 35243974 35244051 - Mir6898 miRNA miRNA MGP_LPJ_T0005935.1 MGP_LPJ_G0004978.1 mouse_genomes_project 1 141628885 141631425 - Gm33994 lincRNA lincRNA MGP_LPJ_T0002912.1 MGP_LPJ_G0002745.1 mouse_genomes_project 1 137880579 137898933 - Gm28609 antisense antisense MGP_LPJ_T0012033.1 MGP_LPJ_G0010124.1 mouse_genomes_project 1 52496933 52497935 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098388.1 MGP_LPJ_G0036669.1 mouse_genomes_project 1 90201160 90201432 + Gm25395 scaRNA scaRNA MGP_LPJ_T0020117.1 MGP_LPJ_G0016002.1 mouse_genomes_project 1 64210111 64246793 - MGP_LPJ_P0020117 Gpr1 protein_coding protein_coding MGP_LPJ_T0020118.1 MGP_LPJ_G0016002.1 mouse_genomes_project 1 64241035 64246473 - Gpr1 protein_coding processed_transcript MGP_LPJ_T0021187.1 MGP_LPJ_G0016216.1 mouse_genomes_project 1 93687800 93805766 + MGP_LPJ_P0021187 Lrrfip1 protein_coding protein_coding MGP_LPJ_T0021188.1 MGP_LPJ_G0016216.1 mouse_genomes_project 1 93687840 93819680 + MGP_LPJ_P0021188 Lrrfip1 protein_coding protein_coding MGP_LPJ_T0021189.1 MGP_LPJ_G0016216.1 mouse_genomes_project 1 93687842 93826108 + MGP_LPJ_P0021189 Lrrfip1 protein_coding protein_coding MGP_LPJ_T0021190.1 MGP_LPJ_G0016216.1 mouse_genomes_project 1 93687861 93813199 + MGP_LPJ_P0021190 Lrrfip1 protein_coding unknown_likely_coding MGP_LPJ_T0021191.1 MGP_LPJ_G0016216.1 mouse_genomes_project 1 93745485 93826112 + MGP_LPJ_P0021191 Lrrfip1 protein_coding protein_coding MGP_LPJ_T0021192.1 MGP_LPJ_G0016216.1 mouse_genomes_project 1 93745500 93814444 + MGP_LPJ_P0021192 Lrrfip1 protein_coding protein_coding MGP_LPJ_T0021193.1 MGP_LPJ_G0016216.1 mouse_genomes_project 1 93745553 93826086 + MGP_LPJ_P0021193 Lrrfip1 protein_coding protein_coding MGP_LPJ_T0021194.1 MGP_LPJ_G0016216.1 mouse_genomes_project 1 93745553 93794727 + MGP_LPJ_P0021194 Lrrfip1 protein_coding protein_coding MGP_LPJ_T0021195.1 MGP_LPJ_G0016216.1 mouse_genomes_project 1 93745632 93825455 + MGP_LPJ_P0021195 Lrrfip1 protein_coding protein_coding MGP_LPJ_T0021196.1 MGP_LPJ_G0016216.1 mouse_genomes_project 1 93808355 93814050 + Lrrfip1 protein_coding processed_transcript MGP_LPJ_T0021197.1 MGP_LPJ_G0016216.1 mouse_genomes_project 1 93808374 93811987 + Lrrfip1 protein_coding processed_transcript MGP_LPJ_T0021198.1 MGP_LPJ_G0016216.1 mouse_genomes_project 1 93817088 93819666 + Lrrfip1 protein_coding processed_transcript MGP_LPJ_T0021199.1 MGP_LPJ_G0016216.1 mouse_genomes_project 1 93822520 93825346 + Lrrfip1 protein_coding retained_intron MGP_LPJ_T0012092.1 MGP_LPJ_G0010183.1 mouse_genomes_project 1 70536535 70536921 - processed_pseudogene processed_pseudogene MGP_LPJ_T0022283.1 MGP_LPJ_G0016453.1 mouse_genomes_project 1 141077845 141078412 + MGP_LPJ_P0022283 Ascl5 protein_coding protein_coding MGP_LPJ_T0009582.1 MGP_LPJ_G0007700.1 mouse_genomes_project 1 203360036 203360117 + Mir29b-2 miRNA miRNA MGP_LPJ_T0023577.1 MGP_LPJ_G0016725.1 mouse_genomes_project 1 180619400 180628795 - MGP_LPJ_P0023577 protein_coding protein_coding MGP_LPJ_T0023049.1 MGP_LPJ_G0016599.1 mouse_genomes_project 1 170765768 170782109 + MGP_LPJ_P0023049 Slc19a2 protein_coding protein_coding MGP_LPJ_T0023050.1 MGP_LPJ_G0016599.1 mouse_genomes_project 1 170765777 170782093 + MGP_LPJ_P0023050 Slc19a2 protein_coding protein_coding MGP_LPJ_T0023051.1 MGP_LPJ_G0016599.1 mouse_genomes_project 1 170765975 170780242 + MGP_LPJ_P0023051 Slc19a2 protein_coding protein_coding MGP_LPJ_T0023052.1 MGP_LPJ_G0016599.1 mouse_genomes_project 1 170779076 170780175 + Slc19a2 protein_coding retained_intron MGP_LPJ_T0000667.1 MGP_LPJ_G0000602.1 mouse_genomes_project 1 137959851 137962958 - TEC TEC MGP_LPJ_T0000668.1 MGP_LPJ_G0000602.1 mouse_genomes_project 1 137962355 137962958 - TEC TEC MGP_LPJ_T0005991.1 MGP_LPJ_G0005020.1 mouse_genomes_project 1 171035669 171047243 + Gm26685 lincRNA lincRNA MGP_LPJ_T0011884.1 MGP_LPJ_G0009975.1 mouse_genomes_project 1 4964654 4964940 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000821.1 MGP_LPJ_G0000752.1 mouse_genomes_project 1 195217401 195220933 + TEC TEC MGP_LPJ_T0022161.1 MGP_LPJ_G0016429.1 mouse_genomes_project 1 139490751 139499463 - MGP_LPJ_P0022161 Mgat4e protein_coding protein_coding MGP_LPJ_T0022162.1 MGP_LPJ_G0016429.1 mouse_genomes_project 1 139490755 139496834 - MGP_LPJ_P0022162 Mgat4e protein_coding protein_coding MGP_LPJ_T0022163.1 MGP_LPJ_G0016429.1 mouse_genomes_project 1 139490765 139496762 - MGP_LPJ_P0022163 Mgat4e protein_coding nonsense_mediated_decay MGP_LPJ_T0012188.1 MGP_LPJ_G0010279.1 mouse_genomes_project 1 115080428 115081209 + processed_pseudogene processed_pseudogene MGP_LPJ_T0020967.1 MGP_LPJ_G0016165.1 mouse_genomes_project 1 88902157 88904947 + MGP_LPJ_P0020967 protein_coding protein_coding MGP_LPJ_T0020968.1 MGP_LPJ_G0016165.1 mouse_genomes_project 1 88902161 88905165 + protein_coding processed_transcript MGP_LPJ_T0020969.1 MGP_LPJ_G0016165.1 mouse_genomes_project 1 88902227 88905629 + MGP_LPJ_P0020969 protein_coding protein_coding MGP_LPJ_T0020970.1 MGP_LPJ_G0016165.1 mouse_genomes_project 1 88902326 88906109 + MGP_LPJ_P0020970 protein_coding protein_coding MGP_LPJ_T0019486.1 MGP_LPJ_G0015885.1 mouse_genomes_project 1 39829371 39931950 + MGP_LPJ_P0019486 Slc9a2 protein_coding protein_coding MGP_LPJ_T0019487.1 MGP_LPJ_G0015885.1 mouse_genomes_project 1 39830436 39886271 + MGP_LPJ_P0019487 Slc9a2 protein_coding protein_coding MGP_LPJ_T0019488.1 MGP_LPJ_G0015885.1 mouse_genomes_project 1 39917764 39919080 + Slc9a2 protein_coding retained_intron MGP_LPJ_T0000830.1 MGP_LPJ_G0000761.1 mouse_genomes_project 1 200360857 200360990 + TEC TEC MGP_LPJ_T0000837.1 MGP_LPJ_G0000767.1 mouse_genomes_project 1 202963091 202964947 + TEC TEC MGP_LPJ_T0020427.1 MGP_LPJ_G0016067.1 mouse_genomes_project 1 76143614 76216143 - MGP_LPJ_P0020427 protein_coding protein_coding MGP_LPJ_T0020428.1 MGP_LPJ_G0016067.1 mouse_genomes_project 1 76145836 76258578 - MGP_LPJ_P0020428 protein_coding protein_coding MGP_LPJ_T0020429.1 MGP_LPJ_G0016067.1 mouse_genomes_project 1 76147234 76175143 - protein_coding processed_transcript MGP_LPJ_T0020430.1 MGP_LPJ_G0016067.1 mouse_genomes_project 1 76157472 76216125 - protein_coding retained_intron MGP_LPJ_T0020431.1 MGP_LPJ_G0016067.1 mouse_genomes_project 1 76204198 76216146 - MGP_LPJ_P0020431 protein_coding protein_coding MGP_LPJ_T0020432.1 MGP_LPJ_G0016067.1 mouse_genomes_project 1 76208352 76216131 - protein_coding retained_intron MGP_LPJ_T0020433.1 MGP_LPJ_G0016067.1 mouse_genomes_project 1 76208436 76216623 - protein_coding processed_transcript MGP_LPJ_T0000623.1 MGP_LPJ_G0000558.1 mouse_genomes_project 1 115569584 115570545 + TEC TEC MGP_LPJ_T0000776.1 MGP_LPJ_G0000709.1 mouse_genomes_project 1 179467897 179469464 + TEC TEC MGP_LPJ_T0023393.1 MGP_LPJ_G0016674.1 mouse_genomes_project 1 178253667 178268609 + MGP_LPJ_P0023393 Pfdn2 protein_coding protein_coding MGP_LPJ_T0023394.1 MGP_LPJ_G0016674.1 mouse_genomes_project 1 178266293 178267877 + Pfdn2 protein_coding processed_transcript MGP_LPJ_T0019684.1 MGP_LPJ_G0015923.1 mouse_genomes_project 1 52631821 52653038 + MGP_LPJ_P0019684 Nemp2 protein_coding protein_coding MGP_LPJ_T0019685.1 MGP_LPJ_G0015923.1 mouse_genomes_project 1 52631855 52653038 + MGP_LPJ_P0019685 Nemp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0019686.1 MGP_LPJ_G0015923.1 mouse_genomes_project 1 52631865 52651755 + MGP_LPJ_P0019686 Nemp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0019687.1 MGP_LPJ_G0015923.1 mouse_genomes_project 1 52631870 52651848 + Nemp2 protein_coding retained_intron MGP_LPJ_T0019688.1 MGP_LPJ_G0015923.1 mouse_genomes_project 1 52631915 52651821 + MGP_LPJ_P0019688 Nemp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0019689.1 MGP_LPJ_G0015923.1 mouse_genomes_project 1 52642634 52653038 + Nemp2 protein_coding retained_intron MGP_LPJ_T0019690.1 MGP_LPJ_G0015923.1 mouse_genomes_project 1 52643102 52651775 + Nemp2 protein_coding processed_transcript MGP_LPJ_T0019691.1 MGP_LPJ_G0015923.1 mouse_genomes_project 1 52646299 52651146 + Nemp2 protein_coding retained_intron MGP_LPJ_T0012173.1 MGP_LPJ_G0010264.1 mouse_genomes_project 1 109855590 109857507 + processed_pseudogene processed_pseudogene MGP_LPJ_T0022726.1 MGP_LPJ_G0016540.1 mouse_genomes_project 1 162372652 162390607 + MGP_LPJ_P0022726 Nphs2 protein_coding protein_coding MGP_LPJ_T0022727.1 MGP_LPJ_G0016540.1 mouse_genomes_project 1 162372968 162389003 + MGP_LPJ_P0022727 Nphs2 protein_coding protein_coding MGP_LPJ_T0005840.1 MGP_LPJ_G0004897.1 mouse_genomes_project 1 89542589 89546699 - Gm29374 lincRNA lincRNA MGP_LPJ_T0016960.1 MGP_LPJ_G0015023.1 mouse_genomes_project 1 101100424 101107001 - B230216N24Rik processed_transcript retained_intron MGP_LPJ_T0016961.1 MGP_LPJ_G0015023.1 mouse_genomes_project 1 101100435 101119004 - B230216N24Rik processed_transcript sense_intronic MGP_LPJ_T0016962.1 MGP_LPJ_G0015023.1 mouse_genomes_project 1 101101025 101119038 - B230216N24Rik processed_transcript sense_intronic MGP_LPJ_T0016963.1 MGP_LPJ_G0015023.1 mouse_genomes_project 1 101101176 101132637 - B230216N24Rik processed_transcript sense_intronic MGP_LPJ_T0016964.1 MGP_LPJ_G0015023.1 mouse_genomes_project 1 101117061 101118999 - B230216N24Rik processed_transcript retained_intron MGP_LPJ_T0005774.1 MGP_LPJ_G0004848.1 mouse_genomes_project 1 62412144 62438336 + Gm11588 lincRNA lincRNA MGP_LPJ_T0101226.1 MGP_LPJ_G0039483.1 mouse_genomes_project 1 119564643 119580511 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101227.1 MGP_LPJ_G0039483.1 mouse_genomes_project 1 119565058 119566245 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0101228.1 MGP_LPJ_G0039483.1 mouse_genomes_project 1 119565486 119580516 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101461.1 MGP_LPJ_G0039617.1 mouse_genomes_project 1 15802387 15826342 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101462.1 MGP_LPJ_G0039617.1 mouse_genomes_project 1 15815647 15825821 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0002802.1 MGP_LPJ_G0002662.1 mouse_genomes_project 1 35428006 35428710 - Gm38033 antisense antisense MGP_LPJ_T0022542.1 MGP_LPJ_G0016504.1 mouse_genomes_project 1 158235022 158255392 - MGP_LPJ_P0022542 Tsen15 protein_coding protein_coding MGP_LPJ_T0022543.1 MGP_LPJ_G0016504.1 mouse_genomes_project 1 158235125 158236370 - Tsen15 protein_coding retained_intron MGP_LPJ_T0022544.1 MGP_LPJ_G0016504.1 mouse_genomes_project 1 158235492 158255302 - MGP_LPJ_P0022544 Tsen15 protein_coding protein_coding MGP_LPJ_T0022545.1 MGP_LPJ_G0016504.1 mouse_genomes_project 1 158235499 158252321 - Tsen15 protein_coding retained_intron MGP_LPJ_T0022546.1 MGP_LPJ_G0016504.1 mouse_genomes_project 1 158236062 158252668 - Tsen15 protein_coding retained_intron MGP_LPJ_T0022547.1 MGP_LPJ_G0016504.1 mouse_genomes_project 1 158251920 158255398 - Tsen15 protein_coding processed_transcript MGP_LPJ_T0022548.1 MGP_LPJ_G0016504.1 mouse_genomes_project 1 158252777 158255330 - Tsen15 protein_coding retained_intron MGP_LPJ_T0011890.1 MGP_LPJ_G0009981.1 mouse_genomes_project 1 6671316 6671834 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012361.1 MGP_LPJ_G0010452.1 mouse_genomes_project 1 197142855 197145268 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023058.1 MGP_LPJ_G0016602.1 mouse_genomes_project 1 170821431 170962255 + MGP_LPJ_P0023058 Nme7 protein_coding nonsense_mediated_decay MGP_LPJ_T0023060.1 MGP_LPJ_G0016602.1 mouse_genomes_project 1 170824982 170961830 + MGP_LPJ_P0023060 Nme7 protein_coding protein_coding MGP_LPJ_T0023061.1 MGP_LPJ_G0016602.1 mouse_genomes_project 1 170825037 170870821 + Nme7 protein_coding processed_transcript MGP_LPJ_T0023062.1 MGP_LPJ_G0016602.1 mouse_genomes_project 1 170825058 170830545 + Nme7 protein_coding retained_intron MGP_LPJ_T0023063.1 MGP_LPJ_G0016602.1 mouse_genomes_project 1 170825383 170961824 + MGP_LPJ_P0023063 Nme7 protein_coding protein_coding MGP_LPJ_T0023064.1 MGP_LPJ_G0016602.1 mouse_genomes_project 1 170825407 170850800 + Nme7 protein_coding retained_intron MGP_LPJ_T0023065.1 MGP_LPJ_G0016602.1 mouse_genomes_project 1 170830256 170869545 + MGP_LPJ_P0023065 Nme7 protein_coding protein_coding MGP_LPJ_T0023066.1 MGP_LPJ_G0016602.1 mouse_genomes_project 1 170864924 170902586 + Nme7 protein_coding retained_intron MGP_LPJ_T0023067.1 MGP_LPJ_G0016602.1 mouse_genomes_project 1 170894998 170961766 + Nme7 protein_coding processed_transcript MGP_LPJ_T0023068.1 MGP_LPJ_G0016602.1 mouse_genomes_project 1 170894998 170961822 + Nme7 protein_coding processed_transcript MGP_LPJ_T0022060.1 MGP_LPJ_G0016405.1 mouse_genomes_project 1 138226124 138242883 + MGP_LPJ_P0022060 Etnk2 protein_coding protein_coding MGP_LPJ_T0022061.1 MGP_LPJ_G0016405.1 mouse_genomes_project 1 138226128 138237603 + Etnk2 protein_coding retained_intron MGP_LPJ_T0022062.1 MGP_LPJ_G0016405.1 mouse_genomes_project 1 138226400 138242871 + MGP_LPJ_P0022062 Etnk2 protein_coding protein_coding MGP_LPJ_T0022063.1 MGP_LPJ_G0016405.1 mouse_genomes_project 1 138228316 138231687 + Etnk2 protein_coding retained_intron MGP_LPJ_T0022064.1 MGP_LPJ_G0016405.1 mouse_genomes_project 1 138229839 138239532 + Etnk2 protein_coding processed_transcript MGP_LPJ_T0009516.1 MGP_LPJ_G0007634.1 mouse_genomes_project 1 75890989 75891056 - Mir1928 miRNA miRNA MGP_LPJ_T0000672.1 MGP_LPJ_G0000606.1 mouse_genomes_project 1 139396875 139397857 - TEC TEC MGP_LPJ_T0021376.1 MGP_LPJ_G0016257.1 mouse_genomes_project 1 96171555 96206575 + MGP_LPJ_P0021376 Ano7 protein_coding protein_coding MGP_LPJ_T0021377.1 MGP_LPJ_G0016257.1 mouse_genomes_project 1 96171555 96205671 + MGP_LPJ_P0021377 Ano7 protein_coding protein_coding MGP_LPJ_T0021378.1 MGP_LPJ_G0016257.1 mouse_genomes_project 1 96204128 96205841 + MGP_LPJ_P0021378 Ano7 protein_coding protein_coding MGP_LPJ_T0098100.1 MGP_LPJ_G0036381.1 mouse_genomes_project 1 194036094 194036200 + Gm23821 rRNA rRNA MGP_LPJ_T0002819.1 MGP_LPJ_G0002675.1 mouse_genomes_project 1 39840413 39846608 - Gm37623 antisense antisense MGP_LPJ_T0098754.1 MGP_LPJ_G0037017.1 mouse_genomes_project 1 72052950 72053057 + Gm23422 snRNA snRNA MGP_LPJ_T0019430.1 MGP_LPJ_G0015873.1 mouse_genomes_project 1 38636298 38663208 - MGP_LPJ_P0019430 Rnf149 protein_coding protein_coding MGP_LPJ_T0019431.1 MGP_LPJ_G0015873.1 mouse_genomes_project 1 38637471 38663159 - MGP_LPJ_P0019431 Rnf149 protein_coding nonsense_mediated_decay MGP_LPJ_T0019432.1 MGP_LPJ_G0015873.1 mouse_genomes_project 1 38640601 38643754 - Rnf149 protein_coding retained_intron MGP_LPJ_T0019433.1 MGP_LPJ_G0015873.1 mouse_genomes_project 1 38650089 38663106 - MGP_LPJ_P0019433 Rnf149 protein_coding protein_coding MGP_LPJ_T0020943.1 MGP_LPJ_G0016160.1 mouse_genomes_project 1 88501108 88596086 + Armc9 protein_coding retained_intron MGP_LPJ_T0020944.1 MGP_LPJ_G0016160.1 mouse_genomes_project 1 88501112 88561390 + Armc9 protein_coding retained_intron MGP_LPJ_T0020945.1 MGP_LPJ_G0016160.1 mouse_genomes_project 1 88501112 88609610 + Armc9 protein_coding retained_intron MGP_LPJ_T0020946.1 MGP_LPJ_G0016160.1 mouse_genomes_project 1 88501114 88519732 + Armc9 protein_coding retained_intron MGP_LPJ_T0020947.1 MGP_LPJ_G0016160.1 mouse_genomes_project 1 88501126 88527639 + Armc9 protein_coding processed_transcript MGP_LPJ_T0020948.1 MGP_LPJ_G0016160.1 mouse_genomes_project 1 88501126 88627908 + MGP_LPJ_P0020948 Armc9 protein_coding protein_coding MGP_LPJ_T0020949.1 MGP_LPJ_G0016160.1 mouse_genomes_project 1 88501127 88511153 + MGP_LPJ_P0020949 Armc9 protein_coding protein_coding MGP_LPJ_T0020950.1 MGP_LPJ_G0016160.1 mouse_genomes_project 1 88501138 88629769 + MGP_LPJ_P0020950 Armc9 protein_coding protein_coding MGP_LPJ_T0020951.1 MGP_LPJ_G0016160.1 mouse_genomes_project 1 88501143 88602261 + MGP_LPJ_P0020951 Armc9 protein_coding protein_coding MGP_LPJ_T0020952.1 MGP_LPJ_G0016160.1 mouse_genomes_project 1 88501147 88523544 + Armc9 protein_coding retained_intron MGP_LPJ_T0020953.1 MGP_LPJ_G0016160.1 mouse_genomes_project 1 88544153 88602164 + MGP_LPJ_P0020953 Armc9 protein_coding protein_coding MGP_LPJ_T0020954.1 MGP_LPJ_G0016160.1 mouse_genomes_project 1 88550276 88602261 + MGP_LPJ_P0020954 Armc9 protein_coding protein_coding MGP_LPJ_T0020955.1 MGP_LPJ_G0016160.1 mouse_genomes_project 1 88594325 88618748 + MGP_LPJ_P0020955 Armc9 protein_coding nonsense_mediated_decay MGP_LPJ_T0021696.1 MGP_LPJ_G0016328.1 mouse_genomes_project 1 125478424 125503815 - MGP_LPJ_P0021696 Insig2 protein_coding protein_coding MGP_LPJ_T0021697.1 MGP_LPJ_G0016328.1 mouse_genomes_project 1 125479905 125481329 - Insig2 protein_coding retained_intron MGP_LPJ_T0021698.1 MGP_LPJ_G0016328.1 mouse_genomes_project 1 125479936 125503823 - MGP_LPJ_P0021698 Insig2 protein_coding protein_coding MGP_LPJ_T0021699.1 MGP_LPJ_G0016328.1 mouse_genomes_project 1 125480890 125488383 - Insig2 protein_coding retained_intron MGP_LPJ_T0021700.1 MGP_LPJ_G0016328.1 mouse_genomes_project 1 125480947 125503795 - MGP_LPJ_P0021700 Insig2 protein_coding protein_coding MGP_LPJ_T0021701.1 MGP_LPJ_G0016328.1 mouse_genomes_project 1 125481247 125499192 - MGP_LPJ_P0021701 Insig2 protein_coding protein_coding MGP_LPJ_T0021702.1 MGP_LPJ_G0016328.1 mouse_genomes_project 1 125487814 125495729 - Insig2 protein_coding retained_intron MGP_LPJ_T0021703.1 MGP_LPJ_G0016328.1 mouse_genomes_project 1 125495664 125503712 - MGP_LPJ_P0021703 Insig2 protein_coding protein_coding MGP_LPJ_T0021704.1 MGP_LPJ_G0016328.1 mouse_genomes_project 1 125495734 125503718 - MGP_LPJ_P0021704 Insig2 protein_coding protein_coding MGP_LPJ_T0021705.1 MGP_LPJ_G0016328.1 mouse_genomes_project 1 125495761 125508593 - MGP_LPJ_P0021705 Insig2 protein_coding protein_coding MGP_LPJ_T0099976.1 MGP_LPJ_G0038239.1 mouse_genomes_project 1 45123028 45123159 + Gm23974 snoRNA snoRNA MGP_LPJ_T0000745.1 MGP_LPJ_G0000678.1 mouse_genomes_project 1 166891195 166894870 - TEC TEC MGP_LPJ_T0000497.1 MGP_LPJ_G0000432.1 mouse_genomes_project 1 42893138 42894431 + TEC TEC MGP_LPJ_T0022847.1 MGP_LPJ_G0016559.1 mouse_genomes_project 1 166499615 166504719 + MGP_LPJ_P0022847 Mrps14 protein_coding nonsense_mediated_decay MGP_LPJ_T0022848.1 MGP_LPJ_G0016559.1 mouse_genomes_project 1 166499615 166507068 + MGP_LPJ_P0022848 Mrps14 protein_coding protein_coding MGP_LPJ_T0022849.1 MGP_LPJ_G0016559.1 mouse_genomes_project 1 166499703 166504711 + MGP_LPJ_P0022849 Mrps14 protein_coding protein_coding MGP_LPJ_T0022452.1 MGP_LPJ_G0016490.1 mouse_genomes_project 1 155442081 155543191 - MGP_LPJ_P0022452 Pla2g4a protein_coding protein_coding MGP_LPJ_T0022453.1 MGP_LPJ_G0016490.1 mouse_genomes_project 1 155442506 155553522 - MGP_LPJ_P0022453 Pla2g4a protein_coding protein_coding MGP_LPJ_T0022454.1 MGP_LPJ_G0016490.1 mouse_genomes_project 1 155503193 155588177 - MGP_LPJ_P0022454 Pla2g4a protein_coding protein_coding MGP_LPJ_T0022455.1 MGP_LPJ_G0016490.1 mouse_genomes_project 1 155503233 155521440 - Pla2g4a protein_coding processed_transcript MGP_LPJ_T0022456.1 MGP_LPJ_G0016490.1 mouse_genomes_project 1 155539630 155588203 - Pla2g4a protein_coding retained_intron MGP_LPJ_T0022457.1 MGP_LPJ_G0016490.1 mouse_genomes_project 1 155553307 155588174 - Pla2g4a protein_coding processed_transcript MGP_LPJ_T0099985.1 MGP_LPJ_G0038248.1 mouse_genomes_project 1 60580688 60580772 + Snord11 snoRNA snoRNA MGP_LPJ_T0000611.1 MGP_LPJ_G0000546.1 mouse_genomes_project 1 102991489 102994190 + TEC TEC MGP_LPJ_T0012285.1 MGP_LPJ_G0010376.1 mouse_genomes_project 1 157294296 157295117 + processed_pseudogene processed_pseudogene MGP_LPJ_T0022335.1 MGP_LPJ_G0016464.1 mouse_genomes_project 1 143176544 143230457 - Ptprc protein_coding retained_intron MGP_LPJ_T0022336.1 MGP_LPJ_G0016464.1 mouse_genomes_project 1 143177090 143290507 - MGP_LPJ_P0022336 Ptprc protein_coding protein_coding MGP_LPJ_T0022337.1 MGP_LPJ_G0016464.1 mouse_genomes_project 1 143177096 143290468 - MGP_LPJ_P0022337 Ptprc protein_coding protein_coding MGP_LPJ_T0022338.1 MGP_LPJ_G0016464.1 mouse_genomes_project 1 143177103 143290501 - MGP_LPJ_P0022338 Ptprc protein_coding protein_coding MGP_LPJ_T0022339.1 MGP_LPJ_G0016464.1 mouse_genomes_project 1 143226045 143229490 - Ptprc protein_coding retained_intron MGP_LPJ_T0022340.1 MGP_LPJ_G0016464.1 mouse_genomes_project 1 143226267 143290435 - MGP_LPJ_P0022340 Ptprc protein_coding protein_coding MGP_LPJ_T0022341.1 MGP_LPJ_G0016464.1 mouse_genomes_project 1 143231352 143234736 - Ptprc protein_coding retained_intron MGP_LPJ_T0022342.1 MGP_LPJ_G0016464.1 mouse_genomes_project 1 143231853 143290501 - MGP_LPJ_P0022342 Ptprc protein_coding protein_coding MGP_LPJ_T0022343.1 MGP_LPJ_G0016464.1 mouse_genomes_project 1 143233488 143290500 - Ptprc protein_coding retained_intron MGP_LPJ_T0022344.1 MGP_LPJ_G0016464.1 mouse_genomes_project 1 143239445 143290497 - Ptprc protein_coding retained_intron MGP_LPJ_T0022345.1 MGP_LPJ_G0016464.1 mouse_genomes_project 1 143241675 143290909 - Ptprc protein_coding retained_intron MGP_LPJ_T0022346.1 MGP_LPJ_G0016464.1 mouse_genomes_project 1 143287177 143290390 - Ptprc protein_coding retained_intron MGP_LPJ_T0022347.1 MGP_LPJ_G0016464.1 mouse_genomes_project 1 143287944 143290450 - Ptprc protein_coding retained_intron MGP_LPJ_T0006072.1 MGP_LPJ_G0005083.1 mouse_genomes_project 1 198762128 198772351 + Gm30932 lincRNA lincRNA MGP_LPJ_T0022429.1 MGP_LPJ_G0016484.1 mouse_genomes_project 1 149372061 149376881 - MGP_LPJ_P0022429 Rgs2 protein_coding protein_coding MGP_LPJ_T0022430.1 MGP_LPJ_G0016484.1 mouse_genomes_project 1 149374403 149376855 - MGP_LPJ_P0022430 Rgs2 protein_coding nonsense_mediated_decay MGP_LPJ_T0022431.1 MGP_LPJ_G0016484.1 mouse_genomes_project 1 149374606 149376752 - MGP_LPJ_P0022431 Rgs2 protein_coding protein_coding MGP_LPJ_T0022432.1 MGP_LPJ_G0016484.1 mouse_genomes_project 1 149375240 149376841 - Rgs2 protein_coding retained_intron MGP_LPJ_T0000485.1 MGP_LPJ_G0000420.1 mouse_genomes_project 1 36450655 36453410 - TEC TEC MGP_LPJ_T0021141.1 MGP_LPJ_G0016205.1 mouse_genomes_project 1 91660031 91741119 + MGP_LPJ_P0021141 Sh3bp4 protein_coding protein_coding MGP_LPJ_T0021142.1 MGP_LPJ_G0016205.1 mouse_genomes_project 1 91660069 91697929 + Sh3bp4 protein_coding processed_transcript MGP_LPJ_T0016942.1 MGP_LPJ_G0015015.1 mouse_genomes_project 1 65763084 65773781 - 2810408I11Rik processed_transcript antisense MGP_LPJ_T0016943.1 MGP_LPJ_G0015015.1 mouse_genomes_project 1 65766493 65773730 - 2810408I11Rik processed_transcript antisense MGP_LPJ_T0016944.1 MGP_LPJ_G0015015.1 mouse_genomes_project 1 65772245 65773750 - 2810408I11Rik processed_transcript retained_intron MGP_LPJ_T0000595.1 MGP_LPJ_G0000530.1 mouse_genomes_project 1 92073617 92075996 + TEC TEC MGP_LPJ_T0000479.1 MGP_LPJ_G0000414.1 mouse_genomes_project 1 34902208 34903580 - TEC TEC MGP_LPJ_T0020183.1 MGP_LPJ_G0016018.1 mouse_genomes_project 1 66166663 66170908 - MGP_LPJ_P0020183 Crygc protein_coding protein_coding MGP_LPJ_T0020184.1 MGP_LPJ_G0016018.1 mouse_genomes_project 1 66166669 66170740 - MGP_LPJ_P0020184 Crygc protein_coding protein_coding MGP_LPJ_T0019348.1 MGP_LPJ_G0015856.1 mouse_genomes_project 1 36868507 36872113 + MGP_LPJ_P0019348 Lipt1 protein_coding protein_coding MGP_LPJ_T0019349.1 MGP_LPJ_G0015856.1 mouse_genomes_project 1 36868975 36872998 + MGP_LPJ_P0019349 Lipt1 protein_coding protein_coding MGP_LPJ_T0019350.1 MGP_LPJ_G0015856.1 mouse_genomes_project 1 36869143 36872230 + MGP_LPJ_P0019350 Lipt1 protein_coding protein_coding MGP_LPJ_T0019351.1 MGP_LPJ_G0015856.1 mouse_genomes_project 1 36869331 36872324 + MGP_LPJ_P0019351 Lipt1 protein_coding protein_coding MGP_LPJ_T0098789.1 MGP_LPJ_G0037052.1 mouse_genomes_project 1 150349715 150349821 - Gm22681 snRNA snRNA MGP_LPJ_T0011918.1 MGP_LPJ_G0010009.1 mouse_genomes_project 1 16506712 16507621 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005689.1 MGP_LPJ_G0004788.1 mouse_genomes_project 1 23038883 23040651 - Gm28237 lincRNA lincRNA MGP_LPJ_T0005690.1 MGP_LPJ_G0004788.1 mouse_genomes_project 1 23039670 23040833 - Gm28237 lincRNA lincRNA MGP_LPJ_T0002884.1 MGP_LPJ_G0002726.1 mouse_genomes_project 1 96449604 96450920 + Gm28536 antisense antisense MGP_LPJ_T0002793.1 MGP_LPJ_G0002654.1 mouse_genomes_project 1 18197237 18237616 + 4930486I03Rik antisense antisense MGP_LPJ_T0006082.1 MGP_LPJ_G0005091.1 mouse_genomes_project 1 201301257 201302690 - Gm31406 lincRNA lincRNA MGP_LPJ_T0022853.1 MGP_LPJ_G0016561.1 mouse_genomes_project 1 166524078 166669696 - MGP_LPJ_P0022853 Rabgap1l protein_coding protein_coding MGP_LPJ_T0022854.1 MGP_LPJ_G0016561.1 mouse_genomes_project 1 166530952 166536760 - Rabgap1l protein_coding retained_intron MGP_LPJ_T0022855.1 MGP_LPJ_G0016561.1 mouse_genomes_project 1 166531468 166559701 - MGP_LPJ_P0022855 Rabgap1l protein_coding protein_coding MGP_LPJ_T0022856.1 MGP_LPJ_G0016561.1 mouse_genomes_project 1 166531520 166617722 - MGP_LPJ_P0022856 Rabgap1l protein_coding protein_coding MGP_LPJ_T0022857.1 MGP_LPJ_G0016561.1 mouse_genomes_project 1 166531570 166596785 - Rabgap1l protein_coding processed_transcript MGP_LPJ_T0022858.1 MGP_LPJ_G0016561.1 mouse_genomes_project 1 166544971 166556253 - Rabgap1l protein_coding retained_intron MGP_LPJ_T0022859.1 MGP_LPJ_G0016561.1 mouse_genomes_project 1 166556236 166559014 - Rabgap1l protein_coding processed_transcript MGP_LPJ_T0022860.1 MGP_LPJ_G0016561.1 mouse_genomes_project 1 166564833 166619554 - MGP_LPJ_P0022860 Rabgap1l protein_coding nonsense_mediated_decay MGP_LPJ_T0022861.1 MGP_LPJ_G0016561.1 mouse_genomes_project 1 166565194 166753498 - MGP_LPJ_P0022861 Rabgap1l protein_coding protein_coding MGP_LPJ_T0022862.1 MGP_LPJ_G0016561.1 mouse_genomes_project 1 166565466 167127040 - MGP_LPJ_P0022862 Rabgap1l protein_coding protein_coding MGP_LPJ_T0022863.1 MGP_LPJ_G0016561.1 mouse_genomes_project 1 166593329 166596972 - Rabgap1l protein_coding processed_transcript MGP_LPJ_T0022864.1 MGP_LPJ_G0016561.1 mouse_genomes_project 1 166598051 166603746 - Rabgap1l protein_coding processed_transcript MGP_LPJ_T0022865.1 MGP_LPJ_G0016561.1 mouse_genomes_project 1 166599763 166618160 - Rabgap1l protein_coding processed_transcript MGP_LPJ_T0022866.1 MGP_LPJ_G0016561.1 mouse_genomes_project 1 166753230 166768739 - Rabgap1l protein_coding retained_intron MGP_LPJ_T0022867.1 MGP_LPJ_G0016561.1 mouse_genomes_project 1 167000936 167127032 - MGP_LPJ_P0022867 Rabgap1l protein_coding protein_coding MGP_LPJ_T0022868.1 MGP_LPJ_G0016561.1 mouse_genomes_project 1 167068899 167127315 - MGP_LPJ_P0022868 Rabgap1l protein_coding protein_coding MGP_LPJ_T0011967.1 MGP_LPJ_G0010058.1 mouse_genomes_project 1 33261949 33262242 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005800.1 MGP_LPJ_G0004867.1 mouse_genomes_project 1 73494784 73543123 - 4933417E11Rik lincRNA lincRNA MGP_LPJ_T0002812.1 MGP_LPJ_G0002670.1 mouse_genomes_project 1 37409495 37419930 + Gm16152 antisense antisense MGP_LPJ_T0002813.1 MGP_LPJ_G0002670.1 mouse_genomes_project 1 37414784 37416200 + Gm16152 antisense antisense MGP_LPJ_T0012341.1 MGP_LPJ_G0010432.1 mouse_genomes_project 1 185177700 185178310 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011998.1 MGP_LPJ_G0010089.1 mouse_genomes_project 1 43832401 43832710 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002993.1 MGP_LPJ_G0002809.1 mouse_genomes_project 1 192781403 192800485 + Gm38251 antisense antisense MGP_LPJ_T0009577.1 MGP_LPJ_G0007695.1 mouse_genomes_project 1 193187029 193187141 + Mir215 miRNA miRNA MGP_LPJ_T0000466.1 MGP_LPJ_G0000402.1 mouse_genomes_project 1 31357190 31359660 + TEC TEC MGP_LPJ_T0023437.1 MGP_LPJ_G0016687.1 mouse_genomes_project 1 178754465 178788138 + Cd84 protein_coding processed_transcript MGP_LPJ_T0023438.1 MGP_LPJ_G0016687.1 mouse_genomes_project 1 178755307 178769808 + MGP_LPJ_P0023438 Cd84 protein_coding protein_coding MGP_LPJ_T0023439.1 MGP_LPJ_G0016687.1 mouse_genomes_project 1 178755375 178798797 + MGP_LPJ_P0023439 Cd84 protein_coding protein_coding MGP_LPJ_T0022329.1 MGP_LPJ_G0016463.1 mouse_genomes_project 1 141921660 142044758 - MGP_LPJ_P0022329 Nr5a2 protein_coding protein_coding MGP_LPJ_T0022330.1 MGP_LPJ_G0016463.1 mouse_genomes_project 1 141924280 142032457 - MGP_LPJ_P0022330 Nr5a2 protein_coding protein_coding MGP_LPJ_T0022331.1 MGP_LPJ_G0016463.1 mouse_genomes_project 1 141925315 142044690 - MGP_LPJ_P0022331 Nr5a2 protein_coding protein_coding MGP_LPJ_T0022332.1 MGP_LPJ_G0016463.1 mouse_genomes_project 1 141925464 142037653 - MGP_LPJ_P0022332 Nr5a2 protein_coding protein_coding MGP_LPJ_T0022333.1 MGP_LPJ_G0016463.1 mouse_genomes_project 1 141971526 142023479 - Nr5a2 protein_coding retained_intron MGP_LPJ_T0022334.1 MGP_LPJ_G0016463.1 mouse_genomes_project 1 142023880 142032068 - MGP_LPJ_P0022334 Nr5a2 protein_coding protein_coding MGP_LPJ_T0011262.1 MGP_LPJ_G0009380.1 mouse_genomes_project 1 60495608 60495693 + Gm24545 misc_RNA misc_RNA MGP_LPJ_T0100046.1 MGP_LPJ_G0038309.1 mouse_genomes_project 1 179878781 179878904 - Gm26077 snoRNA snoRNA MGP_LPJ_T0009519.1 MGP_LPJ_G0007637.1 mouse_genomes_project 1 76635986 76636050 - Mir375 miRNA miRNA MGP_LPJ_T0011877.1 MGP_LPJ_G0009968.1 mouse_genomes_project 1 4303935 4304260 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021337.1 MGP_LPJ_G0016249.1 mouse_genomes_project 1 95806287 95897016 - MGP_LPJ_P0021337 Kif1a protein_coding protein_coding MGP_LPJ_T0021338.1 MGP_LPJ_G0016249.1 mouse_genomes_project 1 95808588 95897025 - MGP_LPJ_P0021338 Kif1a protein_coding protein_coding MGP_LPJ_T0021339.1 MGP_LPJ_G0016249.1 mouse_genomes_project 1 95808777 95897145 - MGP_LPJ_P0021339 Kif1a protein_coding protein_coding MGP_LPJ_T0021340.1 MGP_LPJ_G0016249.1 mouse_genomes_project 1 95809117 95897041 - MGP_LPJ_P0021340 Kif1a protein_coding protein_coding MGP_LPJ_T0021341.1 MGP_LPJ_G0016249.1 mouse_genomes_project 1 95809294 95877628 - MGP_LPJ_P0021341 Kif1a protein_coding protein_coding MGP_LPJ_T0021342.1 MGP_LPJ_G0016249.1 mouse_genomes_project 1 95813162 95815550 - MGP_LPJ_P0021342 Kif1a protein_coding nonsense_mediated_decay MGP_LPJ_T0021343.1 MGP_LPJ_G0016249.1 mouse_genomes_project 1 95814334 95818047 - Kif1a protein_coding retained_intron MGP_LPJ_T0021344.1 MGP_LPJ_G0016249.1 mouse_genomes_project 1 95829847 95897040 - Kif1a protein_coding processed_transcript MGP_LPJ_T0021345.1 MGP_LPJ_G0016249.1 mouse_genomes_project 1 95833302 95846147 - MGP_LPJ_P0021345 Kif1a protein_coding nonsense_mediated_decay MGP_LPJ_T0021346.1 MGP_LPJ_G0016249.1 mouse_genomes_project 1 95861336 95863963 - Kif1a protein_coding processed_transcript MGP_LPJ_T0021347.1 MGP_LPJ_G0016249.1 mouse_genomes_project 1 95872930 95897028 - MGP_LPJ_P0021347 Kif1a protein_coding protein_coding MGP_LPJ_T0098459.1 MGP_LPJ_G0036739.1 mouse_genomes_project 1 158557806 158561610 - Gm15479 sense_intronic sense_intronic MGP_LPJ_T0020352.1 MGP_LPJ_G0016054.1 mouse_genomes_project 1 75578810 75799860 - MGP_LPJ_P0020352 Tns1 protein_coding protein_coding MGP_LPJ_T0020353.1 MGP_LPJ_G0016054.1 mouse_genomes_project 1 75578811 75765584 - MGP_LPJ_P0020353 Tns1 protein_coding protein_coding MGP_LPJ_T0020354.1 MGP_LPJ_G0016054.1 mouse_genomes_project 1 75578811 75799862 - MGP_LPJ_P0020354 Tns1 protein_coding protein_coding MGP_LPJ_T0020355.1 MGP_LPJ_G0016054.1 mouse_genomes_project 1 75582490 75597090 - MGP_LPJ_P0020355 Tns1 protein_coding protein_coding MGP_LPJ_T0020356.1 MGP_LPJ_G0016054.1 mouse_genomes_project 1 75582672 75665747 - MGP_LPJ_P0020356 Tns1 protein_coding protein_coding MGP_LPJ_T0020357.1 MGP_LPJ_G0016054.1 mouse_genomes_project 1 75582696 75665747 - MGP_LPJ_P0020357 Tns1 protein_coding protein_coding MGP_LPJ_T0020358.1 MGP_LPJ_G0016054.1 mouse_genomes_project 1 75583109 75799860 - MGP_LPJ_P0020358 Tns1 protein_coding unknown_likely_coding MGP_LPJ_T0020359.1 MGP_LPJ_G0016054.1 mouse_genomes_project 1 75593706 75609752 - MGP_LPJ_P0020359 Tns1 protein_coding protein_coding MGP_LPJ_T0020360.1 MGP_LPJ_G0016054.1 mouse_genomes_project 1 75593993 75599388 - Tns1 protein_coding processed_transcript MGP_LPJ_T0020361.1 MGP_LPJ_G0016054.1 mouse_genomes_project 1 75593993 75596794 - Tns1 protein_coding retained_intron MGP_LPJ_T0020362.1 MGP_LPJ_G0016054.1 mouse_genomes_project 1 75594206 75599082 - Tns1 protein_coding processed_transcript MGP_LPJ_T0020363.1 MGP_LPJ_G0016054.1 mouse_genomes_project 1 75622106 75632890 - MGP_LPJ_P0020363 Tns1 protein_coding protein_coding MGP_LPJ_T0020364.1 MGP_LPJ_G0016054.1 mouse_genomes_project 1 75650245 75657444 - Tns1 protein_coding retained_intron MGP_LPJ_T0020365.1 MGP_LPJ_G0016054.1 mouse_genomes_project 1 75660130 75668843 - Tns1 protein_coding retained_intron MGP_LPJ_T0020366.1 MGP_LPJ_G0016054.1 mouse_genomes_project 1 75660782 75688465 - Tns1 protein_coding processed_transcript MGP_LPJ_T0020367.1 MGP_LPJ_G0016054.1 mouse_genomes_project 1 75662508 75668843 - Tns1 protein_coding processed_transcript MGP_LPJ_T0020368.1 MGP_LPJ_G0016054.1 mouse_genomes_project 1 75662613 75671914 - MGP_LPJ_P0020368 Tns1 protein_coding protein_coding MGP_LPJ_T0020369.1 MGP_LPJ_G0016054.1 mouse_genomes_project 1 75663571 75710793 - MGP_LPJ_P0020369 Tns1 protein_coding protein_coding MGP_LPJ_T0020370.1 MGP_LPJ_G0016054.1 mouse_genomes_project 1 75665174 75668070 - Tns1 protein_coding retained_intron MGP_LPJ_T0020371.1 MGP_LPJ_G0016054.1 mouse_genomes_project 1 75665662 75771065 - MGP_LPJ_P0020371 Tns1 protein_coding protein_coding MGP_LPJ_T0020372.1 MGP_LPJ_G0016054.1 mouse_genomes_project 1 75667429 75771108 - MGP_LPJ_P0020372 Tns1 protein_coding protein_coding MGP_LPJ_T0020373.1 MGP_LPJ_G0016054.1 mouse_genomes_project 1 75672661 75710817 - Tns1 protein_coding processed_transcript MGP_LPJ_T0019492.1 MGP_LPJ_G0015887.1 mouse_genomes_project 1 39971003 40022904 + MGP_LPJ_P0019492 Tmem182 protein_coding protein_coding MGP_LPJ_T0012278.1 MGP_LPJ_G0010369.1 mouse_genomes_project 1 154642585 154644588 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000784.1 MGP_LPJ_G0000717.1 mouse_genomes_project 1 184228225 184228938 + TEC TEC MGP_LPJ_T0022473.1 MGP_LPJ_G0016494.1 mouse_genomes_project 1 156073424 156131487 + MGP_LPJ_P0022473 Tpr protein_coding protein_coding MGP_LPJ_T0022474.1 MGP_LPJ_G0016494.1 mouse_genomes_project 1 156073836 156131607 + MGP_LPJ_P0022474 Tpr protein_coding protein_coding MGP_LPJ_T0022475.1 MGP_LPJ_G0016494.1 mouse_genomes_project 1 156073970 156076082 + Tpr protein_coding retained_intron MGP_LPJ_T0022476.1 MGP_LPJ_G0016494.1 mouse_genomes_project 1 156092510 156094437 + Tpr protein_coding retained_intron MGP_LPJ_T0022477.1 MGP_LPJ_G0016494.1 mouse_genomes_project 1 156095261 156096873 + Tpr protein_coding retained_intron MGP_LPJ_T0022478.1 MGP_LPJ_G0016494.1 mouse_genomes_project 1 156105529 156109151 + Tpr protein_coding retained_intron MGP_LPJ_T0022479.1 MGP_LPJ_G0016494.1 mouse_genomes_project 1 156110154 156121005 + MGP_LPJ_P0022479 Tpr protein_coding protein_coding MGP_LPJ_T0022480.1 MGP_LPJ_G0016494.1 mouse_genomes_project 1 156111241 156121002 + Tpr protein_coding retained_intron MGP_LPJ_T0022481.1 MGP_LPJ_G0016494.1 mouse_genomes_project 1 156118316 156123907 + Tpr protein_coding retained_intron MGP_LPJ_T0022482.1 MGP_LPJ_G0016494.1 mouse_genomes_project 1 156119619 156131599 + Tpr protein_coding retained_intron MGP_LPJ_T0022483.1 MGP_LPJ_G0016494.1 mouse_genomes_project 1 156120886 156131599 + Tpr protein_coding retained_intron MGP_LPJ_T0022484.1 MGP_LPJ_G0016494.1 mouse_genomes_project 1 156126577 156131599 + MGP_LPJ_P0022484 Tpr protein_coding protein_coding MGP_LPJ_T0022485.1 MGP_LPJ_G0016494.1 mouse_genomes_project 1 156128116 156131601 + Tpr protein_coding retained_intron MGP_LPJ_T0022486.1 MGP_LPJ_G0016494.1 mouse_genomes_project 1 156130541 156131463 + Tpr protein_coding processed_transcript MGP_LPJ_T0021783.1 MGP_LPJ_G0016344.1 mouse_genomes_project 1 132522476 132678707 - MGP_LPJ_P0021783 Zranb3 protein_coding protein_coding MGP_LPJ_T0021784.1 MGP_LPJ_G0016344.1 mouse_genomes_project 1 132522962 132679246 - MGP_LPJ_P0021784 Zranb3 protein_coding protein_coding MGP_LPJ_T0021785.1 MGP_LPJ_G0016344.1 mouse_genomes_project 1 132533439 132543012 - Zranb3 protein_coding processed_transcript MGP_LPJ_T0021786.1 MGP_LPJ_G0016344.1 mouse_genomes_project 1 132557320 132679292 - Zranb3 protein_coding processed_transcript MGP_LPJ_T0021787.1 MGP_LPJ_G0016344.1 mouse_genomes_project 1 132567445 132678708 - Zranb3 protein_coding retained_intron MGP_LPJ_T0021788.1 MGP_LPJ_G0016344.1 mouse_genomes_project 1 132567833 132589653 - Zranb3 protein_coding processed_transcript MGP_LPJ_T0021789.1 MGP_LPJ_G0016344.1 mouse_genomes_project 1 132631638 132678699 - Zranb3 protein_coding retained_intron MGP_LPJ_T0009543.1 MGP_LPJ_G0007661.1 mouse_genomes_project 1 123020175 123020256 + Mir6346 miRNA miRNA MGP_LPJ_T0020626.1 MGP_LPJ_G0016099.1 mouse_genomes_project 1 76999418 77009164 - MGP_LPJ_P0020626 Dnpep protein_coding protein_coding MGP_LPJ_T0020627.1 MGP_LPJ_G0016099.1 mouse_genomes_project 1 76999418 77009186 - MGP_LPJ_P0020627 Dnpep protein_coding protein_coding MGP_LPJ_T0020628.1 MGP_LPJ_G0016099.1 mouse_genomes_project 1 76999462 77008520 - MGP_LPJ_P0020628 Dnpep protein_coding protein_coding MGP_LPJ_T0020629.1 MGP_LPJ_G0016099.1 mouse_genomes_project 1 77000087 77008472 - MGP_LPJ_P0020629 Dnpep protein_coding protein_coding MGP_LPJ_T0020630.1 MGP_LPJ_G0016099.1 mouse_genomes_project 1 77000087 77008676 - MGP_LPJ_P0020630 Dnpep protein_coding protein_coding MGP_LPJ_T0020631.1 MGP_LPJ_G0016099.1 mouse_genomes_project 1 77000705 77005282 - Dnpep protein_coding retained_intron MGP_LPJ_T0020632.1 MGP_LPJ_G0016099.1 mouse_genomes_project 1 77003990 77008936 - Dnpep protein_coding retained_intron MGP_LPJ_T0020633.1 MGP_LPJ_G0016099.1 mouse_genomes_project 1 77005886 77008328 - MGP_LPJ_P0020633 Dnpep protein_coding protein_coding MGP_LPJ_T0020634.1 MGP_LPJ_G0016099.1 mouse_genomes_project 1 77005889 77008548 - MGP_LPJ_P0020634 Dnpep protein_coding protein_coding MGP_LPJ_T0020635.1 MGP_LPJ_G0016099.1 mouse_genomes_project 1 77006724 77008840 - MGP_LPJ_P0020635 Dnpep protein_coding protein_coding MGP_LPJ_T0020636.1 MGP_LPJ_G0016099.1 mouse_genomes_project 1 77007506 77008974 - MGP_LPJ_P0020636 Dnpep protein_coding protein_coding MGP_LPJ_T0020637.1 MGP_LPJ_G0016099.1 mouse_genomes_project 1 77007871 77008899 - Dnpep protein_coding retained_intron MGP_LPJ_T0020638.1 MGP_LPJ_G0016099.1 mouse_genomes_project 1 77007894 77009517 - MGP_LPJ_P0020638 Dnpep protein_coding protein_coding MGP_LPJ_T0020639.1 MGP_LPJ_G0016099.1 mouse_genomes_project 1 77008078 77008909 - MGP_LPJ_P0020639 Dnpep protein_coding protein_coding MGP_LPJ_T0019324.1 MGP_LPJ_G0015852.1 mouse_genomes_project 1 36392774 36401776 + MGP_LPJ_P0019324 Unc50 protein_coding protein_coding MGP_LPJ_T0019325.1 MGP_LPJ_G0015852.1 mouse_genomes_project 1 36392805 36401916 + MGP_LPJ_P0019325 Unc50 protein_coding protein_coding MGP_LPJ_T0019326.1 MGP_LPJ_G0015852.1 mouse_genomes_project 1 36392812 36400270 + MGP_LPJ_P0019326 Unc50 protein_coding protein_coding MGP_LPJ_T0019327.1 MGP_LPJ_G0015852.1 mouse_genomes_project 1 36392821 36400062 + MGP_LPJ_P0019327 Unc50 protein_coding protein_coding MGP_LPJ_T0019328.1 MGP_LPJ_G0015852.1 mouse_genomes_project 1 36392837 36401779 + MGP_LPJ_P0019328 Unc50 protein_coding protein_coding MGP_LPJ_T0019329.1 MGP_LPJ_G0015852.1 mouse_genomes_project 1 36392843 36394190 + MGP_LPJ_P0019329 Unc50 protein_coding protein_coding MGP_LPJ_T0019330.1 MGP_LPJ_G0015852.1 mouse_genomes_project 1 36393979 36400404 + Unc50 protein_coding retained_intron MGP_LPJ_T0011263.1 MGP_LPJ_G0009381.1 mouse_genomes_project 1 64205403 64205579 + Gm27390 misc_RNA misc_RNA MGP_LPJ_T0018792.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7516689 7518045 + Cspp1 protein_coding retained_intron MGP_LPJ_T0018793.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7516708 7526235 + MGP_LPJ_P0018793 Cspp1 protein_coding protein_coding MGP_LPJ_T0018794.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7516919 7619983 + MGP_LPJ_P0018794 Cspp1 protein_coding protein_coding MGP_LPJ_T0018795.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7516928 7542965 + Cspp1 protein_coding retained_intron MGP_LPJ_T0018796.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7516951 7540253 + Cspp1 protein_coding retained_intron MGP_LPJ_T0018797.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7516964 7548328 + MGP_LPJ_P0018797 Cspp1 protein_coding protein_coding MGP_LPJ_T0018798.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7518469 7540077 + Cspp1 protein_coding retained_intron MGP_LPJ_T0018799.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7518475 7549217 + MGP_LPJ_P0018799 Cspp1 protein_coding protein_coding MGP_LPJ_T0018800.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7518475 7549574 + MGP_LPJ_P0018800 Cspp1 protein_coding protein_coding MGP_LPJ_T0018801.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7518479 7540063 + Cspp1 protein_coding retained_intron MGP_LPJ_T0018802.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7518487 7548312 + MGP_LPJ_P0018802 Cspp1 protein_coding protein_coding MGP_LPJ_T0018803.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7518525 7541185 + Cspp1 protein_coding retained_intron MGP_LPJ_T0018804.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7518857 7540028 + MGP_LPJ_P0018804 Cspp1 protein_coding protein_coding MGP_LPJ_T0018805.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7525193 7619360 + MGP_LPJ_P0018805 Cspp1 protein_coding protein_coding MGP_LPJ_T0018806.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7538128 7547785 + MGP_LPJ_P0018806 Cspp1 protein_coding protein_coding MGP_LPJ_T0018807.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7552668 7557677 + Cspp1 protein_coding retained_intron MGP_LPJ_T0018808.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7555867 7568494 + Cspp1 protein_coding retained_intron MGP_LPJ_T0018809.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7556345 7566450 + Cspp1 protein_coding retained_intron MGP_LPJ_T0018810.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7556398 7572932 + MGP_LPJ_P0018810 Cspp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0018811.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7570423 7572994 + Cspp1 protein_coding retained_intron MGP_LPJ_T0018812.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7578549 7590593 + Cspp1 protein_coding retained_intron MGP_LPJ_T0018813.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7586267 7590582 + Cspp1 protein_coding retained_intron MGP_LPJ_T0018814.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7595547 7616863 + MGP_LPJ_P0018814 Cspp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0018815.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7598096 7599403 + Cspp1 protein_coding retained_intron MGP_LPJ_T0018816.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7608071 7612708 + Cspp1 protein_coding retained_intron MGP_LPJ_T0018817.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7612648 7616151 + Cspp1 protein_coding retained_intron MGP_LPJ_T0018818.1 MGP_LPJ_G0015749.1 mouse_genomes_project 1 7616659 7619537 + Cspp1 protein_coding retained_intron MGP_LPJ_T0000735.1 MGP_LPJ_G0000668.1 mouse_genomes_project 1 163549458 163551855 - TEC TEC MGP_LPJ_T0002811.1 MGP_LPJ_G0002669.1 mouse_genomes_project 1 37329102 37333131 + Gm16151 antisense antisense MGP_LPJ_T0022869.1 MGP_LPJ_G0016562.1 mouse_genomes_project 1 167236971 167314023 + MGP_LPJ_P0022869 Rc3h1 protein_coding protein_coding MGP_LPJ_T0022870.1 MGP_LPJ_G0016562.1 mouse_genomes_project 1 167263560 167306853 + MGP_LPJ_P0022870 Rc3h1 protein_coding protein_coding MGP_LPJ_T0022871.1 MGP_LPJ_G0016562.1 mouse_genomes_project 1 167289945 167291100 + Rc3h1 protein_coding retained_intron MGP_LPJ_T0022444.1 MGP_LPJ_G0016487.1 mouse_genomes_project 1 149895953 149949513 - Rgs21 protein_coding processed_transcript MGP_LPJ_T0022445.1 MGP_LPJ_G0016487.1 mouse_genomes_project 1 149897914 149932758 - MGP_LPJ_P0022445 Rgs21 protein_coding protein_coding MGP_LPJ_T0000437.1 MGP_LPJ_G0000374.1 mouse_genomes_project 1 22036205 22036595 + TEC TEC MGP_LPJ_T0000438.1 MGP_LPJ_G0000374.1 mouse_genomes_project 1 22036207 22036595 + TEC TEC MGP_LPJ_T0021565.1 MGP_LPJ_G0016300.1 mouse_genomes_project 1 110918769 110957248 + MGP_LPJ_P0021565 Serpinb7 protein_coding protein_coding MGP_LPJ_T0021566.1 MGP_LPJ_G0016300.1 mouse_genomes_project 1 110944465 110973818 + MGP_LPJ_P0021566 Serpinb7 protein_coding protein_coding MGP_LPJ_T0021549.1 MGP_LPJ_G0016293.1 mouse_genomes_project 1 110278776 110304766 + MGP_LPJ_P0021549 Serpinb5 protein_coding protein_coding MGP_LPJ_T0021550.1 MGP_LPJ_G0016293.1 mouse_genomes_project 1 110278777 110301761 + MGP_LPJ_P0021550 Serpinb5 protein_coding protein_coding MGP_LPJ_T0021551.1 MGP_LPJ_G0016293.1 mouse_genomes_project 1 110278806 110304766 + MGP_LPJ_P0021551 Serpinb5 protein_coding protein_coding MGP_LPJ_T0021552.1 MGP_LPJ_G0016293.1 mouse_genomes_project 1 110291669 110304765 + MGP_LPJ_P0021552 Serpinb5 protein_coding protein_coding MGP_LPJ_T0023175.1 MGP_LPJ_G0016624.1 mouse_genomes_project 1 173085234 173101947 - MGP_LPJ_P0023175 Gm4846 protein_coding protein_coding MGP_LPJ_T0099955.1 MGP_LPJ_G0038218.1 mouse_genomes_project 1 8646809 8646937 - Gm24173 snoRNA snoRNA MGP_LPJ_T0000693.1 MGP_LPJ_G0000626.1 mouse_genomes_project 1 143709772 143713432 - TEC TEC MGP_LPJ_T0000726.1 MGP_LPJ_G0000659.1 mouse_genomes_project 1 162124897 162128684 - TEC TEC MGP_LPJ_T0020783.1 MGP_LPJ_G0016127.1 mouse_genomes_project 1 82475082 82748095 - MGP_LPJ_P0020783 Dock10 protein_coding protein_coding MGP_LPJ_T0020784.1 MGP_LPJ_G0016127.1 mouse_genomes_project 1 82475197 82572910 - MGP_LPJ_P0020784 Dock10 protein_coding protein_coding MGP_LPJ_T0020785.1 MGP_LPJ_G0016127.1 mouse_genomes_project 1 82475562 82653817 - MGP_LPJ_P0020785 Dock10 protein_coding protein_coding MGP_LPJ_T0020786.1 MGP_LPJ_G0016127.1 mouse_genomes_project 1 82475650 82504476 - MGP_LPJ_P0020786 Dock10 protein_coding protein_coding MGP_LPJ_T0020787.1 MGP_LPJ_G0016127.1 mouse_genomes_project 1 82475722 82653783 - MGP_LPJ_P0020787 Dock10 protein_coding protein_coding MGP_LPJ_T0020788.1 MGP_LPJ_G0016127.1 mouse_genomes_project 1 82476900 82480326 - Dock10 protein_coding retained_intron MGP_LPJ_T0020789.1 MGP_LPJ_G0016127.1 mouse_genomes_project 1 82495279 82497156 - Dock10 protein_coding retained_intron MGP_LPJ_T0020790.1 MGP_LPJ_G0016127.1 mouse_genomes_project 1 82563033 82748174 - Dock10 protein_coding retained_intron MGP_LPJ_T0020791.1 MGP_LPJ_G0016127.1 mouse_genomes_project 1 82566467 82688231 - MGP_LPJ_P0020791 Dock10 protein_coding protein_coding MGP_LPJ_T0020792.1 MGP_LPJ_G0016127.1 mouse_genomes_project 1 82572677 82653800 - MGP_LPJ_P0020792 Dock10 protein_coding protein_coding MGP_LPJ_T0020793.1 MGP_LPJ_G0016127.1 mouse_genomes_project 1 82630352 82748134 - Dock10 protein_coding retained_intron MGP_LPJ_T0020717.1 MGP_LPJ_G0016110.1 mouse_genomes_project 1 79173424 79318852 - MGP_LPJ_P0020717 Epha4 protein_coding protein_coding MGP_LPJ_T0020718.1 MGP_LPJ_G0016110.1 mouse_genomes_project 1 79173428 79318843 - MGP_LPJ_P0020718 Epha4 protein_coding nonsense_mediated_decay MGP_LPJ_T0020719.1 MGP_LPJ_G0016110.1 mouse_genomes_project 1 79179356 79318852 - MGP_LPJ_P0020719 Epha4 protein_coding protein_coding MGP_LPJ_T0020720.1 MGP_LPJ_G0016110.1 mouse_genomes_project 1 79179835 79183822 - MGP_LPJ_P0020720 Epha4 protein_coding protein_coding MGP_LPJ_T0020721.1 MGP_LPJ_G0016110.1 mouse_genomes_project 1 79179853 79318843 - MGP_LPJ_P0020721 Epha4 protein_coding nonsense_mediated_decay MGP_LPJ_T0020722.1 MGP_LPJ_G0016110.1 mouse_genomes_project 1 79204288 79318849 - Epha4 protein_coding retained_intron MGP_LPJ_T0020723.1 MGP_LPJ_G0016110.1 mouse_genomes_project 1 79208799 79318847 - MGP_LPJ_P0020723 Epha4 protein_coding protein_coding MGP_LPJ_T0012080.1 MGP_LPJ_G0010171.1 mouse_genomes_project 1 66116852 66117505 + processed_pseudogene processed_pseudogene MGP_LPJ_T0023260.1 MGP_LPJ_G0016649.1 mouse_genomes_project 1 177491053 177530101 + MGP_LPJ_P0023260 Olfml2b protein_coding protein_coding MGP_LPJ_T0020156.1 MGP_LPJ_G0016011.1 mouse_genomes_project 1 65686689 65697484 - MGP_LPJ_P0020156 Mettl21a protein_coding protein_coding MGP_LPJ_T0020157.1 MGP_LPJ_G0016011.1 mouse_genomes_project 1 65686696 65697410 - MGP_LPJ_P0020157 Mettl21a protein_coding protein_coding MGP_LPJ_T0020158.1 MGP_LPJ_G0016011.1 mouse_genomes_project 1 65688172 65695873 - Mettl21a protein_coding processed_transcript MGP_LPJ_T0020159.1 MGP_LPJ_G0016011.1 mouse_genomes_project 1 65694443 65697426 - Mettl21a protein_coding processed_transcript MGP_LPJ_T0000502.1 MGP_LPJ_G0000437.1 mouse_genomes_project 1 47361250 47362156 + TEC TEC MGP_LPJ_T0019981.1 MGP_LPJ_G0015982.1 mouse_genomes_project 1 60382329 60504221 + MGP_LPJ_P0019981 Gm973 protein_coding protein_coding MGP_LPJ_T0019982.1 MGP_LPJ_G0015982.1 mouse_genomes_project 1 60391511 60394189 + MGP_LPJ_P0019982 Gm973 protein_coding protein_coding MGP_LPJ_T0019983.1 MGP_LPJ_G0015982.1 mouse_genomes_project 1 60391875 60465986 + MGP_LPJ_P0019983 Gm973 protein_coding unknown_likely_coding MGP_LPJ_T0019984.1 MGP_LPJ_G0015982.1 mouse_genomes_project 1 60412439 60424408 + Gm973 protein_coding retained_intron MGP_LPJ_T0019985.1 MGP_LPJ_G0015982.1 mouse_genomes_project 1 60416962 60430879 + Gm973 protein_coding processed_transcript MGP_LPJ_T0019986.1 MGP_LPJ_G0015982.1 mouse_genomes_project 1 60426121 60434722 + Gm973 protein_coding retained_intron MGP_LPJ_T0019988.1 MGP_LPJ_G0015982.1 mouse_genomes_project 1 60475806 60497290 + Gm973 protein_coding processed_transcript MGP_LPJ_T0019989.1 MGP_LPJ_G0015982.1 mouse_genomes_project 1 60475840 60499332 + Gm973 protein_coding processed_transcript MGP_LPJ_T0019990.1 MGP_LPJ_G0015982.1 mouse_genomes_project 1 60488442 60497272 + Gm973 protein_coding processed_transcript MGP_LPJ_T0019991.1 MGP_LPJ_G0015982.1 mouse_genomes_project 1 60499351 60506129 + MGP_LPJ_P0019991 Gm973 protein_coding protein_coding MGP_LPJ_T0012002.1 MGP_LPJ_G0010093.1 mouse_genomes_project 1 44304603 44305348 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005966.1 MGP_LPJ_G0005002.1 mouse_genomes_project 1 160053551 160138944 - A830008E24Rik lincRNA lincRNA MGP_LPJ_T0005967.1 MGP_LPJ_G0005002.1 mouse_genomes_project 1 160065890 160140768 - A830008E24Rik lincRNA lincRNA MGP_LPJ_T0021830.1 MGP_LPJ_G0016352.1 mouse_genomes_project 1 135080906 135165207 - MGP_LPJ_P0021830 Cd55b protein_coding protein_coding MGP_LPJ_T0019832.1 MGP_LPJ_G0015956.1 mouse_genomes_project 1 58116305 58132889 + MGP_LPJ_P0019832 9430016H08Rik protein_coding protein_coding MGP_LPJ_T0019558.1 MGP_LPJ_G0015901.1 mouse_genomes_project 1 43465964 43478230 - MGP_LPJ_P0019558 Kdelc1 protein_coding protein_coding MGP_LPJ_T0019559.1 MGP_LPJ_G0015901.1 mouse_genomes_project 1 43466303 43478175 - Kdelc1 protein_coding retained_intron MGP_LPJ_T0019560.1 MGP_LPJ_G0015901.1 mouse_genomes_project 1 43466305 43478187 - MGP_LPJ_P0019560 Kdelc1 protein_coding protein_coding MGP_LPJ_T0019561.1 MGP_LPJ_G0015901.1 mouse_genomes_project 1 43471501 43478187 - Kdelc1 protein_coding retained_intron MGP_LPJ_T0019562.1 MGP_LPJ_G0015901.1 mouse_genomes_project 1 43474202 43478123 - MGP_LPJ_P0019562 Kdelc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0098772.1 MGP_LPJ_G0037035.1 mouse_genomes_project 1 122498530 122498655 - Gm22710 snRNA snRNA MGP_LPJ_T0021860.1 MGP_LPJ_G0016361.1 mouse_genomes_project 1 135541106 135566627 + MGP_LPJ_P0021860 Pigr protein_coding protein_coding MGP_LPJ_T0021861.1 MGP_LPJ_G0016361.1 mouse_genomes_project 1 135541310 135559094 + MGP_LPJ_P0021861 Pigr protein_coding protein_coding MGP_LPJ_T0021862.1 MGP_LPJ_G0016361.1 mouse_genomes_project 1 135543432 135559062 + MGP_LPJ_P0021862 Pigr protein_coding protein_coding MGP_LPJ_T0000690.1 MGP_LPJ_G0000623.1 mouse_genomes_project 1 143277020 143282884 - TEC TEC MGP_LPJ_T0000778.1 MGP_LPJ_G0000711.1 mouse_genomes_project 1 182659396 182661206 - TEC TEC MGP_LPJ_T0101733.1 MGP_LPJ_G0039771.1 mouse_genomes_project 1 181237685 181248104 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0021556.1 MGP_LPJ_G0016295.1 mouse_genomes_project 1 110404026 110425876 + MGP_LPJ_P0021556 Serpinb13 protein_coding protein_coding MGP_LPJ_T0021557.1 MGP_LPJ_G0016295.1 mouse_genomes_project 1 110404036 110425579 + MGP_LPJ_P0021557 Serpinb13 protein_coding nonsense_mediated_decay MGP_LPJ_T0020841.1 MGP_LPJ_G0016138.1 mouse_genomes_project 1 85132474 85133466 + MGP_LPJ_P0020841 Krtap28-13 protein_coding protein_coding MGP_LPJ_T0021275.1 MGP_LPJ_G0016231.1 mouse_genomes_project 1 95201132 95235955 - MGP_LPJ_P0021275 Ndufa10 protein_coding protein_coding MGP_LPJ_T0021276.1 MGP_LPJ_G0016231.1 mouse_genomes_project 1 95201401 95235852 - MGP_LPJ_P0021276 Ndufa10 protein_coding nonsense_mediated_decay MGP_LPJ_T0021277.1 MGP_LPJ_G0016231.1 mouse_genomes_project 1 95201964 95222840 - Ndufa10 protein_coding retained_intron MGP_LPJ_T0021278.1 MGP_LPJ_G0016231.1 mouse_genomes_project 1 95214175 95225112 - Ndufa10 protein_coding processed_transcript MGP_LPJ_T0021279.1 MGP_LPJ_G0016231.1 mouse_genomes_project 1 95224344 95232985 - Ndufa10 protein_coding retained_intron MGP_LPJ_T0021280.1 MGP_LPJ_G0016231.1 mouse_genomes_project 1 95225225 95233174 - Ndufa10 protein_coding retained_intron MGP_LPJ_T0021281.1 MGP_LPJ_G0016231.1 mouse_genomes_project 1 95229537 95235842 - MGP_LPJ_P0021281 Ndufa10 protein_coding protein_coding MGP_LPJ_T0021282.1 MGP_LPJ_G0016231.1 mouse_genomes_project 1 95234873 95235862 - Ndufa10 protein_coding retained_intron MGP_LPJ_T0098809.1 MGP_LPJ_G0037072.1 mouse_genomes_project 1 188556059 188556167 + Gm24836 snRNA snRNA MGP_LPJ_T0020192.1 MGP_LPJ_G0016023.1 mouse_genomes_project 1 66254255 66274799 - MGP_LPJ_P0020192 Idh1 protein_coding protein_coding MGP_LPJ_T0020193.1 MGP_LPJ_G0016023.1 mouse_genomes_project 1 66254257 66281947 - MGP_LPJ_P0020193 Idh1 protein_coding protein_coding MGP_LPJ_T0020194.1 MGP_LPJ_G0016023.1 mouse_genomes_project 1 66261838 66281906 - MGP_LPJ_P0020194 Idh1 protein_coding protein_coding MGP_LPJ_T0020195.1 MGP_LPJ_G0016023.1 mouse_genomes_project 1 66261883 66281968 - MGP_LPJ_P0020195 Idh1 protein_coding protein_coding MGP_LPJ_T0020196.1 MGP_LPJ_G0016023.1 mouse_genomes_project 1 66264228 66271182 - MGP_LPJ_P0020196 Idh1 protein_coding protein_coding MGP_LPJ_T0020197.1 MGP_LPJ_G0016023.1 mouse_genomes_project 1 66266759 66281927 - MGP_LPJ_P0020197 Idh1 protein_coding protein_coding MGP_LPJ_T0020198.1 MGP_LPJ_G0016023.1 mouse_genomes_project 1 66270913 66281947 - MGP_LPJ_P0020198 Idh1 protein_coding protein_coding MGP_LPJ_T0018649.1 MGP_LPJ_G0015724.1 mouse_genomes_project 1 375836 386278 - Xkr4 protein_coding processed_transcript MGP_LPJ_T0018650.1 MGP_LPJ_G0015724.1 mouse_genomes_project 1 376459 385566 - Xkr4 protein_coding processed_transcript MGP_LPJ_T0018651.1 MGP_LPJ_G0015724.1 mouse_genomes_project 1 384415 855221 - MGP_LPJ_P0018651 Xkr4 protein_coding protein_coding MGP_LPJ_T0002999.1 MGP_LPJ_G0002815.1 mouse_genomes_project 1 195102575 195106583 + 1700007P06Rik antisense antisense MGP_LPJ_T0019575.1 MGP_LPJ_G0015904.1 mouse_genomes_project 1 43572876 43587728 - MGP_LPJ_P0019575 Mettl21e protein_coding protein_coding MGP_LPJ_T0019576.1 MGP_LPJ_G0015904.1 mouse_genomes_project 1 43575231 43587680 - Mettl21e protein_coding retained_intron MGP_LPJ_T0098694.1 MGP_LPJ_G0036962.1 mouse_genomes_project 1 41985821 42041004 + Gm20646 sense_overlapping sense_overlapping MGP_LPJ_T0098695.1 MGP_LPJ_G0036962.1 mouse_genomes_project 1 41985821 42037181 + Gm20646 sense_overlapping sense_overlapping MGP_LPJ_T0019788.1 MGP_LPJ_G0015946.1 mouse_genomes_project 1 55628828 55632004 + MGP_LPJ_P0019788 Hspe1 protein_coding protein_coding MGP_LPJ_T0019789.1 MGP_LPJ_G0015946.1 mouse_genomes_project 1 55629010 55630612 + Hspe1 protein_coding retained_intron MGP_LPJ_T0003020.1 MGP_LPJ_G0002829.1 mouse_genomes_project 1 200309760 200318566 + Gm26879 antisense antisense MGP_LPJ_T0005963.1 MGP_LPJ_G0005000.1 mouse_genomes_project 1 160021836 160024284 - Gm29291 lincRNA lincRNA MGP_LPJ_T0005964.1 MGP_LPJ_G0005000.1 mouse_genomes_project 1 160021992 160024288 - Gm29291 lincRNA lincRNA MGP_LPJ_T0018891.1 MGP_LPJ_G0015763.1 mouse_genomes_project 1 12523150 12570474 - MGP_LPJ_P0018891 Trpa1 protein_coding protein_coding MGP_LPJ_T0022683.1 MGP_LPJ_G0016533.1 mouse_genomes_project 1 161782012 161828361 - MGP_LPJ_P0022683 Lhx4 protein_coding protein_coding MGP_LPJ_T0022684.1 MGP_LPJ_G0016533.1 mouse_genomes_project 1 161789788 161838055 - MGP_LPJ_P0022684 Lhx4 protein_coding protein_coding MGP_LPJ_T0009575.1 MGP_LPJ_G0007693.1 mouse_genomes_project 1 193115383 193115452 + Mir664 miRNA miRNA MGP_LPJ_T0023838.1 MGP_LPJ_G0016795.1 mouse_genomes_project 1 188676259 188685864 + MGP_LPJ_P0023838 Tmem63a protein_coding protein_coding MGP_LPJ_T0023839.1 MGP_LPJ_G0016795.1 mouse_genomes_project 1 188676373 188688564 + MGP_LPJ_P0023839 Tmem63a protein_coding nonsense_mediated_decay MGP_LPJ_T0023840.1 MGP_LPJ_G0016795.1 mouse_genomes_project 1 188676374 188709262 + MGP_LPJ_P0023840 Tmem63a protein_coding protein_coding MGP_LPJ_T0023841.1 MGP_LPJ_G0016795.1 mouse_genomes_project 1 188676489 188689686 + MGP_LPJ_P0023841 Tmem63a protein_coding protein_coding MGP_LPJ_T0023842.1 MGP_LPJ_G0016795.1 mouse_genomes_project 1 188677950 188709253 + MGP_LPJ_P0023842 Tmem63a protein_coding protein_coding MGP_LPJ_T0023843.1 MGP_LPJ_G0016795.1 mouse_genomes_project 1 188679819 188680628 + MGP_LPJ_P0023843 Tmem63a protein_coding protein_coding MGP_LPJ_T0023844.1 MGP_LPJ_G0016795.1 mouse_genomes_project 1 188679875 188682752 + MGP_LPJ_P0023844 Tmem63a protein_coding protein_coding MGP_LPJ_T0023845.1 MGP_LPJ_G0016795.1 mouse_genomes_project 1 188693747 188694522 + Tmem63a protein_coding retained_intron MGP_LPJ_T0002931.1 MGP_LPJ_G0002759.1 mouse_genomes_project 1 152270569 152303066 - Gm15584 antisense antisense MGP_LPJ_T0022985.1 MGP_LPJ_G0016582.1 mouse_genomes_project 1 169260483 169283970 - MGP_LPJ_P0022985 Fmo4 protein_coding protein_coding MGP_LPJ_T0022986.1 MGP_LPJ_G0016582.1 mouse_genomes_project 1 169261178 169282847 - MGP_LPJ_P0022986 Fmo4 protein_coding protein_coding MGP_LPJ_T0022987.1 MGP_LPJ_G0016582.1 mouse_genomes_project 1 169269178 169283970 - Fmo4 protein_coding retained_intron MGP_LPJ_T0022988.1 MGP_LPJ_G0016582.1 mouse_genomes_project 1 169269935 169274800 - Fmo4 protein_coding retained_intron MGP_LPJ_T0022989.1 MGP_LPJ_G0016582.1 mouse_genomes_project 1 169273839 169284225 - MGP_LPJ_P0022989 Fmo4 protein_coding protein_coding MGP_LPJ_T0022990.1 MGP_LPJ_G0016582.1 mouse_genomes_project 1 169274610 169284271 - MGP_LPJ_P0022990 Fmo4 protein_coding protein_coding MGP_LPJ_T0011888.1 MGP_LPJ_G0009979.1 mouse_genomes_project 1 5849010 5849410 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012017.1 MGP_LPJ_G0010108.1 mouse_genomes_project 1 48304745 48304958 + processed_pseudogene processed_pseudogene MGP_LPJ_T0023493.1 MGP_LPJ_G0016697.1 mouse_genomes_project 1 179159393 179169340 - MGP_LPJ_P0023493 Casq1 protein_coding protein_coding MGP_LPJ_T0023494.1 MGP_LPJ_G0016697.1 mouse_genomes_project 1 179159394 179163454 - Casq1 protein_coding retained_intron MGP_LPJ_T0023495.1 MGP_LPJ_G0016697.1 mouse_genomes_project 1 179164639 179169187 - MGP_LPJ_P0023495 Casq1 protein_coding protein_coding MGP_LPJ_T0022127.1 MGP_LPJ_G0016421.1 mouse_genomes_project 1 139218590 139221150 + MGP_LPJ_P0022127 Myog protein_coding protein_coding MGP_LPJ_T0023043.1 MGP_LPJ_G0016597.1 mouse_genomes_project 1 170609926 170647325 + MGP_LPJ_P0023043 Selp protein_coding protein_coding MGP_LPJ_T0023044.1 MGP_LPJ_G0016597.1 mouse_genomes_project 1 170638242 170639717 + Selp protein_coding retained_intron MGP_LPJ_T0023045.1 MGP_LPJ_G0016597.1 mouse_genomes_project 1 170638801 170646440 + MGP_LPJ_P0023045 Selp protein_coding nonsense_mediated_decay MGP_LPJ_T0023046.1 MGP_LPJ_G0016597.1 mouse_genomes_project 1 170641626 170647310 + Selp protein_coding retained_intron MGP_LPJ_T0023047.1 MGP_LPJ_G0016597.1 mouse_genomes_project 1 170643619 170646453 + Selp protein_coding retained_intron MGP_LPJ_T0012311.1 MGP_LPJ_G0010402.1 mouse_genomes_project 1 170525380 170525769 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000483.1 MGP_LPJ_G0000418.1 mouse_genomes_project 1 36260239 36260585 - TEC TEC MGP_LPJ_T0000629.1 MGP_LPJ_G0000564.1 mouse_genomes_project 1 125898399 125899148 + TEC TEC MGP_LPJ_T0012225.1 MGP_LPJ_G0010316.1 mouse_genomes_project 1 127546789 127549423 + processed_pseudogene processed_pseudogene MGP_LPJ_T0020601.1 MGP_LPJ_G0016095.1 mouse_genomes_project 1 76908497 76912057 - MGP_LPJ_P0020601 A630095N17Rik protein_coding protein_coding MGP_LPJ_T0020602.1 MGP_LPJ_G0016095.1 mouse_genomes_project 1 76908658 76920450 - MGP_LPJ_P0020602 A630095N17Rik protein_coding protein_coding MGP_LPJ_T0020603.1 MGP_LPJ_G0016095.1 mouse_genomes_project 1 76919222 76920462 - MGP_LPJ_P0020603 A630095N17Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0012269.1 MGP_LPJ_G0010360.1 mouse_genomes_project 1 150573879 150574875 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012181.1 MGP_LPJ_G0010272.1 mouse_genomes_project 1 112174111 112174289 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005937.1 MGP_LPJ_G0004980.1 mouse_genomes_project 1 141679846 141682399 - Platr23 lincRNA lincRNA MGP_LPJ_T0019626.1 MGP_LPJ_G0015917.1 mouse_genomes_project 1 51435186 51447714 - MGP_LPJ_P0019626 Nabp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0019627.1 MGP_LPJ_G0015917.1 mouse_genomes_project 1 51435331 51447382 - MGP_LPJ_P0019627 Nabp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0019628.1 MGP_LPJ_G0015917.1 mouse_genomes_project 1 51439181 51447714 - MGP_LPJ_P0019628 Nabp1 protein_coding protein_coding MGP_LPJ_T0019629.1 MGP_LPJ_G0015917.1 mouse_genomes_project 1 51440569 51447230 - MGP_LPJ_P0019629 Nabp1 protein_coding protein_coding MGP_LPJ_T0019630.1 MGP_LPJ_G0015917.1 mouse_genomes_project 1 51440663 51442721 - Nabp1 protein_coding retained_intron MGP_LPJ_T0019631.1 MGP_LPJ_G0015917.1 mouse_genomes_project 1 51444906 51447714 - Nabp1 protein_coding retained_intron MGP_LPJ_T0005844.1 MGP_LPJ_G0004901.1 mouse_genomes_project 1 91233472 91235257 + Gm29336 lincRNA lincRNA MGP_LPJ_T0000509.1 MGP_LPJ_G0000444.1 mouse_genomes_project 1 55447509 55450259 - TEC TEC MGP_LPJ_T0005920.1 MGP_LPJ_G0004963.1 mouse_genomes_project 1 134954845 134966154 - Gm16081 lincRNA lincRNA MGP_LPJ_T0000532.1 MGP_LPJ_G0000467.1 mouse_genomes_project 1 64281843 64282322 - TEC TEC MGP_LPJ_T0012075.1 MGP_LPJ_G0010166.1 mouse_genomes_project 1 64735976 64736480 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002778.1 MGP_LPJ_G0002644.1 mouse_genomes_project 1 7461484 7471483 + Gm15818 antisense antisense MGP_LPJ_T0098088.1 MGP_LPJ_G0036369.1 mouse_genomes_project 1 92954674 92954781 + Gm27648 rRNA rRNA MGP_LPJ_T0005699.1 MGP_LPJ_G0004797.1 mouse_genomes_project 1 33207938 33216359 - 4930568A12Rik lincRNA lincRNA MGP_LPJ_T0005700.1 MGP_LPJ_G0004797.1 mouse_genomes_project 1 33211721 33216681 - 4930568A12Rik lincRNA lincRNA MGP_LPJ_T0018855.1 MGP_LPJ_G0015755.1 mouse_genomes_project 1 10401921 10526916 - MGP_LPJ_P0018855 Slco5a1 protein_coding protein_coding MGP_LPJ_T0018856.1 MGP_LPJ_G0015755.1 mouse_genomes_project 1 10409729 10527335 - MGP_LPJ_P0018856 Slco5a1 protein_coding protein_coding MGP_LPJ_T0018857.1 MGP_LPJ_G0015755.1 mouse_genomes_project 1 10409729 10527335 - MGP_LPJ_P0018857 Slco5a1 protein_coding protein_coding MGP_LPJ_T0018858.1 MGP_LPJ_G0015755.1 mouse_genomes_project 1 10411371 10458766 - Slco5a1 protein_coding processed_transcript MGP_LPJ_T0018859.1 MGP_LPJ_G0015755.1 mouse_genomes_project 1 10510061 10527598 - Slco5a1 protein_coding processed_transcript MGP_LPJ_T0012110.1 MGP_LPJ_G0010201.1 mouse_genomes_project 1 81437692 81439051 - processed_pseudogene processed_pseudogene MGP_LPJ_T0019896.1 MGP_LPJ_G0015967.1 mouse_genomes_project 1 59206355 59225168 + MGP_LPJ_P0019896 Nif3l1 protein_coding protein_coding MGP_LPJ_T0019897.1 MGP_LPJ_G0015967.1 mouse_genomes_project 1 59206471 59245455 + MGP_LPJ_P0019897 Nif3l1 protein_coding protein_coding MGP_LPJ_T0019898.1 MGP_LPJ_G0015967.1 mouse_genomes_project 1 59206832 59211712 + MGP_LPJ_P0019898 Nif3l1 protein_coding nonsense_mediated_decay MGP_LPJ_T0019899.1 MGP_LPJ_G0015967.1 mouse_genomes_project 1 59206933 59209255 + MGP_LPJ_P0019899 Nif3l1 protein_coding protein_coding MGP_LPJ_T0019900.1 MGP_LPJ_G0015967.1 mouse_genomes_project 1 59208835 59223978 + MGP_LPJ_P0019900 Nif3l1 protein_coding protein_coding MGP_LPJ_T0019901.1 MGP_LPJ_G0015967.1 mouse_genomes_project 1 59210371 59219512 + Nif3l1 protein_coding retained_intron MGP_LPJ_T0019902.1 MGP_LPJ_G0015967.1 mouse_genomes_project 1 59215113 59217900 + Nif3l1 protein_coding retained_intron MGP_LPJ_T0019903.1 MGP_LPJ_G0015967.1 mouse_genomes_project 1 59219396 59223096 + Nif3l1 protein_coding retained_intron MGP_LPJ_T0100048.1 MGP_LPJ_G0038311.1 mouse_genomes_project 1 194641796 194641931 + Gm26169 snoRNA snoRNA MGP_LPJ_T0000517.1 MGP_LPJ_G0000452.1 mouse_genomes_project 1 60697126 60700562 + TEC TEC MGP_LPJ_T0098748.1 MGP_LPJ_G0037011.1 mouse_genomes_project 1 64634655 64634758 - Gm22281 snRNA snRNA MGP_LPJ_T0098750.1 MGP_LPJ_G0037013.1 mouse_genomes_project 1 67636496 67636647 + Gm25411 snRNA snRNA MGP_LPJ_T0021643.1 MGP_LPJ_G0016313.1 mouse_genomes_project 1 123500047 123506828 - MGP_LPJ_P0021643 Inhbb protein_coding protein_coding MGP_LPJ_T0022058.1 MGP_LPJ_G0016404.1 mouse_genomes_project 1 138198594 138222890 + MGP_LPJ_P0022058 Ren1 protein_coding protein_coding MGP_LPJ_T0022059.1 MGP_LPJ_G0016404.1 mouse_genomes_project 1 138199993 138202361 + MGP_LPJ_P0022059 Ren1 protein_coding protein_coding MGP_LPJ_T0002925.1 MGP_LPJ_G0002754.1 mouse_genomes_project 1 141251348 141260342 + Gm26568 antisense antisense MGP_LPJ_T0000725.1 MGP_LPJ_G0000658.1 mouse_genomes_project 1 162067343 162068532 + TEC TEC MGP_LPJ_T0098745.1 MGP_LPJ_G0037008.1 mouse_genomes_project 1 59228183 59228290 - Gm23966 snRNA snRNA MGP_LPJ_T0023883.1 MGP_LPJ_G0016805.1 mouse_genomes_project 1 189689977 189817668 - MGP_LPJ_P0023883 Enah protein_coding protein_coding MGP_LPJ_T0023884.1 MGP_LPJ_G0016805.1 mouse_genomes_project 1 189697910 189820506 - MGP_LPJ_P0023884 Enah protein_coding protein_coding MGP_LPJ_T0023885.1 MGP_LPJ_G0016805.1 mouse_genomes_project 1 189697957 189820496 - MGP_LPJ_P0023885 Enah protein_coding protein_coding MGP_LPJ_T0023886.1 MGP_LPJ_G0016805.1 mouse_genomes_project 1 189697957 189820496 - MGP_LPJ_P0023886 Enah protein_coding protein_coding MGP_LPJ_T0023887.1 MGP_LPJ_G0016805.1 mouse_genomes_project 1 189698836 189701916 - Enah protein_coding retained_intron MGP_LPJ_T0023888.1 MGP_LPJ_G0016805.1 mouse_genomes_project 1 189698990 189700350 - Enah protein_coding retained_intron MGP_LPJ_T0023889.1 MGP_LPJ_G0016805.1 mouse_genomes_project 1 189699018 189812438 - MGP_LPJ_P0023889 Enah protein_coding protein_coding MGP_LPJ_T0023890.1 MGP_LPJ_G0016805.1 mouse_genomes_project 1 189699025 189817668 - MGP_LPJ_P0023890 Enah protein_coding protein_coding MGP_LPJ_T0023891.1 MGP_LPJ_G0016805.1 mouse_genomes_project 1 189699025 189817668 - MGP_LPJ_P0023891 Enah protein_coding protein_coding MGP_LPJ_T0023892.1 MGP_LPJ_G0016805.1 mouse_genomes_project 1 189699025 189817668 - MGP_LPJ_P0023892 Enah protein_coding protein_coding MGP_LPJ_T0023893.1 MGP_LPJ_G0016805.1 mouse_genomes_project 1 189699220 189710906 - Enah protein_coding retained_intron MGP_LPJ_T0023894.1 MGP_LPJ_G0016805.1 mouse_genomes_project 1 189704219 189706109 - Enah protein_coding retained_intron MGP_LPJ_T0023895.1 MGP_LPJ_G0016805.1 mouse_genomes_project 1 189712996 189718342 - MGP_LPJ_P0023895 Enah protein_coding protein_coding MGP_LPJ_T0023896.1 MGP_LPJ_G0016805.1 mouse_genomes_project 1 189717776 189753167 - Enah protein_coding retained_intron MGP_LPJ_T0023897.1 MGP_LPJ_G0016805.1 mouse_genomes_project 1 189731762 189737507 - Enah protein_coding retained_intron MGP_LPJ_T0023898.1 MGP_LPJ_G0016805.1 mouse_genomes_project 1 189752765 189817683 - Enah protein_coding retained_intron MGP_LPJ_T0098805.1 MGP_LPJ_G0037068.1 mouse_genomes_project 1 183194284 183194391 + Gm23805 snRNA snRNA MGP_LPJ_T0019331.1 MGP_LPJ_G0015853.1 mouse_genomes_project 1 36402167 36503788 - MGP_LPJ_P0019331 Mgat4a protein_coding protein_coding MGP_LPJ_T0019332.1 MGP_LPJ_G0015853.1 mouse_genomes_project 1 36406507 36504052 - MGP_LPJ_P0019332 Mgat4a protein_coding protein_coding MGP_LPJ_T0019333.1 MGP_LPJ_G0015853.1 mouse_genomes_project 1 36426419 36462270 - MGP_LPJ_P0019333 Mgat4a protein_coding nonsense_mediated_decay MGP_LPJ_T0019334.1 MGP_LPJ_G0015853.1 mouse_genomes_project 1 36426422 36462232 - MGP_LPJ_P0019334 Mgat4a protein_coding protein_coding MGP_LPJ_T0019335.1 MGP_LPJ_G0015853.1 mouse_genomes_project 1 36461862 36464975 - Mgat4a protein_coding retained_intron MGP_LPJ_T0019336.1 MGP_LPJ_G0015853.1 mouse_genomes_project 1 36500868 36503899 - Mgat4a protein_coding retained_intron MGP_LPJ_T0019781.1 MGP_LPJ_G0015944.1 mouse_genomes_project 1 55589455 55612120 + MGP_LPJ_P0019781 Coq10b protein_coding protein_coding MGP_LPJ_T0019782.1 MGP_LPJ_G0015944.1 mouse_genomes_project 1 55589455 55610598 + MGP_LPJ_P0019782 Coq10b protein_coding protein_coding MGP_LPJ_T0019783.1 MGP_LPJ_G0015944.1 mouse_genomes_project 1 55589554 55590779 + Coq10b protein_coding retained_intron MGP_LPJ_T0019784.1 MGP_LPJ_G0015944.1 mouse_genomes_project 1 55598283 55600402 + Coq10b protein_coding retained_intron MGP_LPJ_T0019365.1 MGP_LPJ_G0015860.1 mouse_genomes_project 1 36953132 36955394 - Lyg1 protein_coding processed_transcript MGP_LPJ_T0019366.1 MGP_LPJ_G0015860.1 mouse_genomes_project 1 36953132 36964153 - MGP_LPJ_P0019366 Lyg1 protein_coding protein_coding MGP_LPJ_T0019367.1 MGP_LPJ_G0015860.1 mouse_genomes_project 1 36953134 36964153 - MGP_LPJ_P0019367 Lyg1 protein_coding protein_coding MGP_LPJ_T0021330.1 MGP_LPJ_G0016247.1 mouse_genomes_project 1 95739637 95768033 + MGP_LPJ_P0021330 Gpr35 protein_coding protein_coding MGP_LPJ_T0021331.1 MGP_LPJ_G0016247.1 mouse_genomes_project 1 95745975 95768356 + MGP_LPJ_P0021331 Gpr35 protein_coding protein_coding MGP_LPJ_T0021332.1 MGP_LPJ_G0016247.1 mouse_genomes_project 1 95758466 95770391 + MGP_LPJ_P0021332 Gpr35 protein_coding protein_coding MGP_LPJ_T0021333.1 MGP_LPJ_G0016247.1 mouse_genomes_project 1 95758466 95771600 + MGP_LPJ_P0021333 Gpr35 protein_coding protein_coding MGP_LPJ_T0021334.1 MGP_LPJ_G0016247.1 mouse_genomes_project 1 95760691 95771211 + MGP_LPJ_P0021334 Gpr35 protein_coding protein_coding MGP_LPJ_T0021335.1 MGP_LPJ_G0016247.1 mouse_genomes_project 1 95764266 95771738 + MGP_LPJ_P0021335 Gpr35 protein_coding protein_coding MGP_LPJ_T0098798.1 MGP_LPJ_G0037061.1 mouse_genomes_project 1 177696526 177696633 - Gm25235 snRNA snRNA MGP_LPJ_T0000425.1 MGP_LPJ_G0000363.1 mouse_genomes_project 1 13024972 13026505 + TEC TEC MGP_LPJ_T0011934.1 MGP_LPJ_G0010025.1 mouse_genomes_project 1 21323022 21323666 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012020.1 MGP_LPJ_G0010111.1 mouse_genomes_project 1 48673049 48674105 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005773.1 MGP_LPJ_G0004847.1 mouse_genomes_project 1 62347913 62365912 + 9530026F06Rik lincRNA lincRNA MGP_LPJ_T0018778.1 MGP_LPJ_G0015746.1 mouse_genomes_project 1 7439400 7447158 - MGP_LPJ_P0018778 Tcf24 protein_coding protein_coding MGP_LPJ_T0018779.1 MGP_LPJ_G0015746.1 mouse_genomes_project 1 7439408 7442047 - MGP_LPJ_P0018779 Tcf24 protein_coding protein_coding MGP_LPJ_T0017030.1 MGP_LPJ_G0015041.1 mouse_genomes_project 1 184825214 184827712 + Gm29856 processed_transcript processed_transcript MGP_LPJ_T0017031.1 MGP_LPJ_G0015041.1 mouse_genomes_project 1 184826690 184827713 + Gm29856 processed_transcript processed_transcript MGP_LPJ_T0000626.1 MGP_LPJ_G0000561.1 mouse_genomes_project 1 125044177 125047288 + TEC TEC MGP_LPJ_T0021964.1 MGP_LPJ_G0016385.1 mouse_genomes_project 1 136883310 136912414 - MGP_LPJ_P0021964 Cdk18 protein_coding protein_coding MGP_LPJ_T0021965.1 MGP_LPJ_G0016385.1 mouse_genomes_project 1 136885659 136887987 - Cdk18 protein_coding retained_intron MGP_LPJ_T0021966.1 MGP_LPJ_G0016385.1 mouse_genomes_project 1 136885837 136912335 - MGP_LPJ_P0021966 Cdk18 protein_coding protein_coding MGP_LPJ_T0021967.1 MGP_LPJ_G0016385.1 mouse_genomes_project 1 136885904 136887764 - MGP_LPJ_P0021967 Cdk18 protein_coding nonsense_mediated_decay MGP_LPJ_T0021968.1 MGP_LPJ_G0016385.1 mouse_genomes_project 1 136886007 136887329 - Cdk18 protein_coding retained_intron MGP_LPJ_T0098724.1 MGP_LPJ_G0036987.1 mouse_genomes_project 1 7304051 7304156 - Gm22607 snRNA snRNA MGP_LPJ_T0005793.1 MGP_LPJ_G0004863.1 mouse_genomes_project 1 70858271 70861300 + Gm28497 lincRNA lincRNA MGP_LPJ_T0012293.1 MGP_LPJ_G0010384.1 mouse_genomes_project 1 161946870 161947129 + processed_pseudogene processed_pseudogene MGP_LPJ_T0023179.1 MGP_LPJ_G0016627.1 mouse_genomes_project 1 173609279 173707493 + MGP_LPJ_P0023179 Fam78b protein_coding protein_coding MGP_LPJ_T0023180.1 MGP_LPJ_G0016627.1 mouse_genomes_project 1 173609279 173707493 + MGP_LPJ_P0023180 Fam78b protein_coding protein_coding MGP_LPJ_T0023181.1 MGP_LPJ_G0016627.1 mouse_genomes_project 1 173609294 173704168 + MGP_LPJ_P0023181 Fam78b protein_coding nonsense_mediated_decay MGP_LPJ_T0023182.1 MGP_LPJ_G0016627.1 mouse_genomes_project 1 173609328 173696215 + MGP_LPJ_P0023182 Fam78b protein_coding protein_coding MGP_LPJ_T0023183.1 MGP_LPJ_G0016627.1 mouse_genomes_project 1 173609442 173703815 + MGP_LPJ_P0023183 Fam78b protein_coding nonsense_mediated_decay MGP_LPJ_T0023184.1 MGP_LPJ_G0016627.1 mouse_genomes_project 1 173609451 173707200 + MGP_LPJ_P0023184 Fam78b protein_coding nonsense_mediated_decay MGP_LPJ_T0012259.1 MGP_LPJ_G0010350.1 mouse_genomes_project 1 145297480 145297901 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012246.1 MGP_LPJ_G0010337.1 mouse_genomes_project 1 140888594 140888963 + processed_pseudogene processed_pseudogene MGP_LPJ_T0020604.1 MGP_LPJ_G0016096.1 mouse_genomes_project 1 76924755 76934037 + MGP_LPJ_P0020604 Dnajb2 protein_coding protein_coding MGP_LPJ_T0020605.1 MGP_LPJ_G0016096.1 mouse_genomes_project 1 76924813 76933153 + MGP_LPJ_P0020605 Dnajb2 protein_coding protein_coding MGP_LPJ_T0020606.1 MGP_LPJ_G0016096.1 mouse_genomes_project 1 76924813 76933153 + MGP_LPJ_P0020606 Dnajb2 protein_coding protein_coding MGP_LPJ_T0020607.1 MGP_LPJ_G0016096.1 mouse_genomes_project 1 76924817 76934041 + MGP_LPJ_P0020607 Dnajb2 protein_coding protein_coding MGP_LPJ_T0020608.1 MGP_LPJ_G0016096.1 mouse_genomes_project 1 76924835 76934039 + MGP_LPJ_P0020608 Dnajb2 protein_coding protein_coding MGP_LPJ_T0020609.1 MGP_LPJ_G0016096.1 mouse_genomes_project 1 76924861 76933404 + MGP_LPJ_P0020609 Dnajb2 protein_coding nonsense_mediated_decay MGP_LPJ_T0020610.1 MGP_LPJ_G0016096.1 mouse_genomes_project 1 76924904 76934039 + MGP_LPJ_P0020610 Dnajb2 protein_coding protein_coding MGP_LPJ_T0020611.1 MGP_LPJ_G0016096.1 mouse_genomes_project 1 76924962 76927682 + MGP_LPJ_P0020611 Dnajb2 protein_coding protein_coding MGP_LPJ_T0020612.1 MGP_LPJ_G0016096.1 mouse_genomes_project 1 76925120 76926030 + Dnajb2 protein_coding retained_intron MGP_LPJ_T0020613.1 MGP_LPJ_G0016096.1 mouse_genomes_project 1 76925423 76925873 + Dnajb2 protein_coding retained_intron MGP_LPJ_T0020614.1 MGP_LPJ_G0016096.1 mouse_genomes_project 1 76927272 76929270 + Dnajb2 protein_coding retained_intron MGP_LPJ_T0020615.1 MGP_LPJ_G0016096.1 mouse_genomes_project 1 76929757 76933276 + MGP_LPJ_P0020615 Dnajb2 protein_coding nonsense_mediated_decay MGP_LPJ_T0002848.1 MGP_LPJ_G0002698.1 mouse_genomes_project 1 67514966 67521342 - Gm10558 antisense antisense MGP_LPJ_T0000549.1 MGP_LPJ_G0000484.1 mouse_genomes_project 1 72026845 72032713 - TEC TEC MGP_LPJ_T0019438.1 MGP_LPJ_G0015877.1 mouse_genomes_project 1 39006739 39138980 + MGP_LPJ_P0019438 Map4k4 protein_coding protein_coding MGP_LPJ_T0019439.1 MGP_LPJ_G0015877.1 mouse_genomes_project 1 39006739 39138980 + MGP_LPJ_P0019439 Map4k4 protein_coding protein_coding MGP_LPJ_T0019440.1 MGP_LPJ_G0015877.1 mouse_genomes_project 1 39006996 39008283 + Map4k4 protein_coding retained_intron MGP_LPJ_T0019441.1 MGP_LPJ_G0015877.1 mouse_genomes_project 1 39006996 39098277 + MGP_LPJ_P0019441 Map4k4 protein_coding protein_coding MGP_LPJ_T0019442.1 MGP_LPJ_G0015877.1 mouse_genomes_project 1 39007005 39137420 + MGP_LPJ_P0019442 Map4k4 protein_coding protein_coding MGP_LPJ_T0019443.1 MGP_LPJ_G0015877.1 mouse_genomes_project 1 39007005 39137420 + MGP_LPJ_P0019443 Map4k4 protein_coding protein_coding MGP_LPJ_T0019444.1 MGP_LPJ_G0015877.1 mouse_genomes_project 1 39007006 39137420 + MGP_LPJ_P0019444 Map4k4 protein_coding protein_coding MGP_LPJ_T0019445.1 MGP_LPJ_G0015877.1 mouse_genomes_project 1 39007050 39137635 + MGP_LPJ_P0019445 Map4k4 protein_coding protein_coding MGP_LPJ_T0019446.1 MGP_LPJ_G0015877.1 mouse_genomes_project 1 39007056 39137591 + MGP_LPJ_P0019446 Map4k4 protein_coding protein_coding MGP_LPJ_T0019447.1 MGP_LPJ_G0015877.1 mouse_genomes_project 1 39070709 39091182 + Map4k4 protein_coding processed_transcript MGP_LPJ_T0019448.1 MGP_LPJ_G0015877.1 mouse_genomes_project 1 39071404 39084781 + Map4k4 protein_coding processed_transcript MGP_LPJ_T0019449.1 MGP_LPJ_G0015877.1 mouse_genomes_project 1 39112176 39113143 + Map4k4 protein_coding retained_intron MGP_LPJ_T0019450.1 MGP_LPJ_G0015877.1 mouse_genomes_project 1 39112474 39119308 + MGP_LPJ_P0019450 Map4k4 protein_coding protein_coding MGP_LPJ_T0019451.1 MGP_LPJ_G0015877.1 mouse_genomes_project 1 39112475 39117482 + MGP_LPJ_P0019451 Map4k4 protein_coding protein_coding MGP_LPJ_T0019452.1 MGP_LPJ_G0015877.1 mouse_genomes_project 1 39113258 39123253 + MGP_LPJ_P0019452 Map4k4 protein_coding protein_coding MGP_LPJ_T0019453.1 MGP_LPJ_G0015877.1 mouse_genomes_project 1 39119958 39121931 + Map4k4 protein_coding retained_intron MGP_LPJ_T0019454.1 MGP_LPJ_G0015877.1 mouse_genomes_project 1 39126517 39127364 + Map4k4 protein_coding retained_intron MGP_LPJ_T0019455.1 MGP_LPJ_G0015877.1 mouse_genomes_project 1 39135897 39137091 + Map4k4 protein_coding retained_intron MGP_LPJ_T0009528.1 MGP_LPJ_G0007646.1 mouse_genomes_project 1 88078695 88078773 + Gm25472 miRNA miRNA MGP_LPJ_T0021502.1 MGP_LPJ_G0016283.1 mouse_genomes_project 1 108122585 108348867 + MGP_LPJ_P0021502 Cdh20 protein_coding protein_coding MGP_LPJ_T0000548.1 MGP_LPJ_G0000483.1 mouse_genomes_project 1 71754153 71756553 - TEC TEC MGP_LPJ_T0098083.1 MGP_LPJ_G0036364.1 mouse_genomes_project 1 78936743 78936837 + Gm25974 rRNA rRNA MGP_LPJ_T0101687.1 MGP_LPJ_G0039725.1 mouse_genomes_project 1 66543795 66543963 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0009537.1 MGP_LPJ_G0007655.1 mouse_genomes_project 1 99301318 99301428 + Gm22917 miRNA miRNA MGP_LPJ_T0100044.1 MGP_LPJ_G0038307.1 mouse_genomes_project 1 172121299 172121426 - Gm23208 snoRNA snoRNA MGP_LPJ_T0002926.1 MGP_LPJ_G0002755.1 mouse_genomes_project 1 141295827 141310827 + Gm26781 antisense antisense MGP_LPJ_T0011272.1 MGP_LPJ_G0009390.1 mouse_genomes_project 1 146656907 146657021 + Gm22016 misc_RNA misc_RNA MGP_LPJ_T0019904.1 MGP_LPJ_G0015968.1 mouse_genomes_project 1 59224482 59270554 - MGP_LPJ_P0019904 Orc2 protein_coding protein_coding MGP_LPJ_T0019905.1 MGP_LPJ_G0015968.1 mouse_genomes_project 1 59225915 59266851 - MGP_LPJ_P0019905 Orc2 protein_coding protein_coding MGP_LPJ_T0019906.1 MGP_LPJ_G0015968.1 mouse_genomes_project 1 59243949 59245088 - Orc2 protein_coding retained_intron MGP_LPJ_T0019907.1 MGP_LPJ_G0015968.1 mouse_genomes_project 1 59247288 59270370 - MGP_LPJ_P0019907 Orc2 protein_coding protein_coding MGP_LPJ_T0019908.1 MGP_LPJ_G0015968.1 mouse_genomes_project 1 59265258 59270400 - MGP_LPJ_P0019908 Orc2 protein_coding protein_coding MGP_LPJ_T0005890.1 MGP_LPJ_G0004940.1 mouse_genomes_project 1 115080200 115147654 - Gm29088 lincRNA lincRNA MGP_LPJ_T0012226.1 MGP_LPJ_G0010317.1 mouse_genomes_project 1 127560195 127560444 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009498.1 MGP_LPJ_G0007616.1 mouse_genomes_project 1 35407035 35407176 + miRNA miRNA MGP_LPJ_T0012193.1 MGP_LPJ_G0010284.1 mouse_genomes_project 1 115880996 115882024 + processed_pseudogene processed_pseudogene MGP_LPJ_T0020379.1 MGP_LPJ_G0016058.1 mouse_genomes_project 1 75924542 75925347 + MGP_LPJ_P0020379 Arpc2 protein_coding protein_coding MGP_LPJ_T0020380.1 MGP_LPJ_G0016058.1 mouse_genomes_project 1 75924955 75957322 + MGP_LPJ_P0020380 Arpc2 protein_coding protein_coding MGP_LPJ_T0020381.1 MGP_LPJ_G0016058.1 mouse_genomes_project 1 75924975 75957100 + MGP_LPJ_P0020381 Arpc2 protein_coding protein_coding MGP_LPJ_T0020382.1 MGP_LPJ_G0016058.1 mouse_genomes_project 1 75925008 75957101 + MGP_LPJ_P0020382 Arpc2 protein_coding protein_coding MGP_LPJ_T0023225.1 MGP_LPJ_G0016640.1 mouse_genomes_project 1 176696460 176716185 - MGP_LPJ_P0023225 Hsd17b7 protein_coding protein_coding MGP_LPJ_T0023226.1 MGP_LPJ_G0016640.1 mouse_genomes_project 1 176699779 176712668 - Hsd17b7 protein_coding processed_transcript MGP_LPJ_T0023227.1 MGP_LPJ_G0016640.1 mouse_genomes_project 1 176702403 176716185 - MGP_LPJ_P0023227 Hsd17b7 protein_coding protein_coding MGP_LPJ_T0023228.1 MGP_LPJ_G0016640.1 mouse_genomes_project 1 176706331 176713095 - Hsd17b7 protein_coding processed_transcript MGP_LPJ_T0005788.1 MGP_LPJ_G0004858.1 mouse_genomes_project 1 65698025 65706276 + Gm28982 lincRNA lincRNA MGP_LPJ_T0022633.1 MGP_LPJ_G0016524.1 mouse_genomes_project 1 159906708 159918540 + MGP_LPJ_P0022633 Glul protein_coding protein_coding MGP_LPJ_T0022634.1 MGP_LPJ_G0016524.1 mouse_genomes_project 1 159907371 159915182 + MGP_LPJ_P0022634 Glul protein_coding protein_coding MGP_LPJ_T0022635.1 MGP_LPJ_G0016524.1 mouse_genomes_project 1 159907881 159914398 + MGP_LPJ_P0022635 Glul protein_coding protein_coding MGP_LPJ_T0022636.1 MGP_LPJ_G0016524.1 mouse_genomes_project 1 159911838 159915071 + Glul protein_coding processed_transcript MGP_LPJ_T0022637.1 MGP_LPJ_G0016524.1 mouse_genomes_project 1 159914084 159915158 + Glul protein_coding retained_intron MGP_LPJ_T0011958.1 MGP_LPJ_G0010049.1 mouse_genomes_project 1 31687909 31690524 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000473.1 MGP_LPJ_G0000408.1 mouse_genomes_project 1 32607404 32609027 - TEC TEC MGP_LPJ_T0019605.1 MGP_LPJ_G0015910.1 mouse_genomes_project 1 45288389 45308193 - MGP_LPJ_P0019605 Slc40a1 protein_coding protein_coding MGP_LPJ_T0019606.1 MGP_LPJ_G0015910.1 mouse_genomes_project 1 45295559 45308220 - Slc40a1 protein_coding retained_intron MGP_LPJ_T0019607.1 MGP_LPJ_G0015910.1 mouse_genomes_project 1 45301612 45305920 - Slc40a1 protein_coding processed_transcript MGP_LPJ_T0019608.1 MGP_LPJ_G0015910.1 mouse_genomes_project 1 45301620 45307873 - Slc40a1 protein_coding processed_transcript MGP_LPJ_T0019609.1 MGP_LPJ_G0015910.1 mouse_genomes_project 1 45303901 45309130 - MGP_LPJ_P0019609 Slc40a1 protein_coding protein_coding MGP_LPJ_T0019610.1 MGP_LPJ_G0015910.1 mouse_genomes_project 1 45303901 45309130 - MGP_LPJ_P0019610 Slc40a1 protein_coding protein_coding MGP_LPJ_T0019611.1 MGP_LPJ_G0015910.1 mouse_genomes_project 1 45303901 45309130 - MGP_LPJ_P0019611 Slc40a1 protein_coding protein_coding MGP_LPJ_T0019612.1 MGP_LPJ_G0015910.1 mouse_genomes_project 1 45306342 45309134 - Slc40a1 protein_coding retained_intron MGP_LPJ_T0022077.1 MGP_LPJ_G0016409.1 mouse_genomes_project 1 138498716 138543836 - MGP_LPJ_P0022077 Zbed6 protein_coding protein_coding MGP_LPJ_T0011265.1 MGP_LPJ_G0009383.1 mouse_genomes_project 1 75022085 75022239 + Gm27315 misc_RNA misc_RNA MGP_LPJ_T0012055.1 MGP_LPJ_G0010146.1 mouse_genomes_project 1 61205698 61205925 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098729.1 MGP_LPJ_G0036992.1 mouse_genomes_project 1 18282058 18282160 - Gm24162 snRNA snRNA MGP_LPJ_T0023203.1 MGP_LPJ_G0016634.1 mouse_genomes_project 1 174343506 174510766 + MGP_LPJ_P0023203 Lmx1a protein_coding protein_coding MGP_LPJ_T0023204.1 MGP_LPJ_G0016634.1 mouse_genomes_project 1 174343826 174510766 + MGP_LPJ_P0023204 Lmx1a protein_coding protein_coding MGP_LPJ_T0023448.1 MGP_LPJ_G0016690.1 mouse_genomes_project 1 178925669 178954137 - MGP_LPJ_P0023448 Vangl2 protein_coding protein_coding MGP_LPJ_T0023449.1 MGP_LPJ_G0016690.1 mouse_genomes_project 1 178925669 178955289 - MGP_LPJ_P0023449 Vangl2 protein_coding protein_coding MGP_LPJ_T0023450.1 MGP_LPJ_G0016690.1 mouse_genomes_project 1 178929011 178954137 - MGP_LPJ_P0023450 Vangl2 protein_coding protein_coding MGP_LPJ_T0023451.1 MGP_LPJ_G0016690.1 mouse_genomes_project 1 178929353 178934467 - Vangl2 protein_coding processed_transcript MGP_LPJ_T0023452.1 MGP_LPJ_G0016690.1 mouse_genomes_project 1 178936864 178953551 - MGP_LPJ_P0023452 Vangl2 protein_coding protein_coding MGP_LPJ_T0023453.1 MGP_LPJ_G0016690.1 mouse_genomes_project 1 178936947 178954110 - MGP_LPJ_P0023453 Vangl2 protein_coding protein_coding MGP_LPJ_T0005973.1 MGP_LPJ_G0005007.1 mouse_genomes_project 1 161601270 161611196 - Gm5532 lincRNA lincRNA MGP_LPJ_T0005974.1 MGP_LPJ_G0005007.1 mouse_genomes_project 1 161609124 161611228 - Gm5532 lincRNA lincRNA MGP_LPJ_T0022928.1 MGP_LPJ_G0016573.1 mouse_genomes_project 1 168230080 168301869 - MGP_LPJ_P0022928 Suco protein_coding protein_coding MGP_LPJ_T0022929.1 MGP_LPJ_G0016573.1 mouse_genomes_project 1 168234358 168236681 - Suco protein_coding retained_intron MGP_LPJ_T0022930.1 MGP_LPJ_G0016573.1 mouse_genomes_project 1 168243841 168244996 - Suco protein_coding retained_intron MGP_LPJ_T0022931.1 MGP_LPJ_G0016573.1 mouse_genomes_project 1 168250838 168261168 - Suco protein_coding processed_transcript MGP_LPJ_T0022932.1 MGP_LPJ_G0016573.1 mouse_genomes_project 1 168254462 168260729 - Suco protein_coding retained_intron MGP_LPJ_T0022933.1 MGP_LPJ_G0016573.1 mouse_genomes_project 1 168261222 168270944 - MGP_LPJ_P0022933 Suco protein_coding protein_coding MGP_LPJ_T0022934.1 MGP_LPJ_G0016573.1 mouse_genomes_project 1 168270029 168276263 - MGP_LPJ_P0022934 Suco protein_coding protein_coding MGP_LPJ_T0005669.1 MGP_LPJ_G0004772.1 mouse_genomes_project 1 7096574 7097895 - Gm29520 lincRNA lincRNA MGP_LPJ_T0009511.1 MGP_LPJ_G0007629.1 mouse_genomes_project 1 64307086 64307224 - Gm24513 miRNA miRNA MGP_LPJ_T0005829.1 MGP_LPJ_G0004888.1 mouse_genomes_project 1 82179416 82183126 + 2310015K22Rik lincRNA lincRNA MGP_LPJ_T0000442.1 MGP_LPJ_G0000378.1 mouse_genomes_project 1 23394607 23397982 - TEC TEC MGP_LPJ_T0021453.1 MGP_LPJ_G0016273.1 mouse_genomes_project 1 98262594 98284253 + MGP_LPJ_P0021453 Fam174a protein_coding protein_coding MGP_LPJ_T0021454.1 MGP_LPJ_G0016273.1 mouse_genomes_project 1 98262599 98276917 + MGP_LPJ_P0021454 Fam174a protein_coding protein_coding MGP_LPJ_T0012303.1 MGP_LPJ_G0010394.1 mouse_genomes_project 1 165690444 165690654 + processed_pseudogene processed_pseudogene MGP_LPJ_T0022700.1 MGP_LPJ_G0016536.1 mouse_genomes_project 1 162100887 162134952 - MGP_LPJ_P0022700 Tor1aip1 protein_coding protein_coding MGP_LPJ_T0022701.1 MGP_LPJ_G0016536.1 mouse_genomes_project 1 162100902 162136553 - MGP_LPJ_P0022701 Tor1aip1 protein_coding protein_coding MGP_LPJ_T0022702.1 MGP_LPJ_G0016536.1 mouse_genomes_project 1 162102523 162136606 - MGP_LPJ_P0022702 Tor1aip1 protein_coding nonsense_mediated_decay MGP_LPJ_T0022703.1 MGP_LPJ_G0016536.1 mouse_genomes_project 1 162103069 162136606 - MGP_LPJ_P0022703 Tor1aip1 protein_coding protein_coding MGP_LPJ_T0022704.1 MGP_LPJ_G0016536.1 mouse_genomes_project 1 162103819 162133090 - MGP_LPJ_P0022704 Tor1aip1 protein_coding protein_coding MGP_LPJ_T0022705.1 MGP_LPJ_G0016536.1 mouse_genomes_project 1 162103860 162135015 - MGP_LPJ_P0022705 Tor1aip1 protein_coding protein_coding MGP_LPJ_T0022706.1 MGP_LPJ_G0016536.1 mouse_genomes_project 1 162103860 162136606 - MGP_LPJ_P0022706 Tor1aip1 protein_coding nonsense_mediated_decay MGP_LPJ_T0022707.1 MGP_LPJ_G0016536.1 mouse_genomes_project 1 162114889 162116190 - Tor1aip1 protein_coding retained_intron MGP_LPJ_T0022708.1 MGP_LPJ_G0016536.1 mouse_genomes_project 1 162121045 162136176 - MGP_LPJ_P0022708 Tor1aip1 protein_coding nonsense_mediated_decay MGP_LPJ_T0022709.1 MGP_LPJ_G0016536.1 mouse_genomes_project 1 162128849 162136273 - Tor1aip1 protein_coding retained_intron MGP_LPJ_T0002792.1 MGP_LPJ_G0002653.1 mouse_genomes_project 1 16862904 16906167 - Gm15825 antisense antisense MGP_LPJ_T0021567.1 MGP_LPJ_G0016301.1 mouse_genomes_project 1 111037234 111051591 + MGP_LPJ_P0021567 Serpinb2 protein_coding protein_coding MGP_LPJ_T0021568.1 MGP_LPJ_G0016301.1 mouse_genomes_project 1 111037308 111051585 + MGP_LPJ_P0021568 Serpinb2 protein_coding protein_coding MGP_LPJ_T0021569.1 MGP_LPJ_G0016301.1 mouse_genomes_project 1 111048246 111063039 + MGP_LPJ_P0021569 Serpinb2 protein_coding nonsense_mediated_decay MGP_LPJ_T0021570.1 MGP_LPJ_G0016301.1 mouse_genomes_project 1 111049961 111060250 + MGP_LPJ_P0021570 Serpinb2 protein_coding nonsense_mediated_decay MGP_LPJ_T0012296.1 MGP_LPJ_G0010387.1 mouse_genomes_project 1 163535300 163535702 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012314.1 MGP_LPJ_G0010405.1 mouse_genomes_project 1 172037182 172038762 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011897.1 MGP_LPJ_G0009988.1 mouse_genomes_project 1 8054303 8054943 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023337.1 MGP_LPJ_G0016667.1 mouse_genomes_project 1 178154674 178165034 + MGP_LPJ_P0023337 Adamts4 protein_coding protein_coding MGP_LPJ_T0023338.1 MGP_LPJ_G0016667.1 mouse_genomes_project 1 178156362 178165034 + MGP_LPJ_P0023338 Adamts4 protein_coding protein_coding MGP_LPJ_T0023298.1 MGP_LPJ_G0016659.1 mouse_genomes_project 1 178024457 178050680 - MGP_LPJ_P0023298 Sdhc protein_coding protein_coding MGP_LPJ_T0023299.1 MGP_LPJ_G0016659.1 mouse_genomes_project 1 178026691 178050668 - MGP_LPJ_P0023299 Sdhc protein_coding protein_coding MGP_LPJ_T0023300.1 MGP_LPJ_G0016659.1 mouse_genomes_project 1 178037562 178050665 - MGP_LPJ_P0023300 Sdhc protein_coding protein_coding MGP_LPJ_T0011264.1 MGP_LPJ_G0009382.1 mouse_genomes_project 1 71353361 71353636 - Gm22665 misc_RNA misc_RNA MGP_LPJ_T0020160.1 MGP_LPJ_G0016012.1 mouse_genomes_project 1 65773576 65808736 + MGP_LPJ_P0020160 Ccnyl1 protein_coding protein_coding MGP_LPJ_T0020161.1 MGP_LPJ_G0016012.1 mouse_genomes_project 1 65773943 65807038 + MGP_LPJ_P0020161 Ccnyl1 protein_coding protein_coding MGP_LPJ_T0020162.1 MGP_LPJ_G0016012.1 mouse_genomes_project 1 65774304 65794576 + MGP_LPJ_P0020162 Ccnyl1 protein_coding protein_coding MGP_LPJ_T0020163.1 MGP_LPJ_G0016012.1 mouse_genomes_project 1 65774466 65808732 + MGP_LPJ_P0020163 Ccnyl1 protein_coding protein_coding MGP_LPJ_T0000663.1 MGP_LPJ_G0000598.1 mouse_genomes_project 1 136678610 136680521 + TEC TEC MGP_LPJ_T0000456.1 MGP_LPJ_G0000392.1 mouse_genomes_project 1 23917084 23921141 - TEC TEC MGP_LPJ_T0024092.1 MGP_LPJ_G0016847.1 mouse_genomes_project 1 198257655 198311361 - MGP_LPJ_P0024092 Prox1 protein_coding protein_coding MGP_LPJ_T0024093.1 MGP_LPJ_G0016847.1 mouse_genomes_project 1 198262073 198310040 - MGP_LPJ_P0024093 Prox1 protein_coding protein_coding MGP_LPJ_T0024094.1 MGP_LPJ_G0016847.1 mouse_genomes_project 1 198262630 198311327 - MGP_LPJ_P0024094 Prox1 protein_coding protein_coding MGP_LPJ_T0020049.1 MGP_LPJ_G0015992.1 mouse_genomes_project 1 61356923 61430772 + MGP_LPJ_P0020049 Abi2 protein_coding protein_coding MGP_LPJ_T0020050.1 MGP_LPJ_G0015992.1 mouse_genomes_project 1 61356999 61430772 + MGP_LPJ_P0020050 Abi2 protein_coding protein_coding MGP_LPJ_T0020051.1 MGP_LPJ_G0015992.1 mouse_genomes_project 1 61356999 61426702 + MGP_LPJ_P0020051 Abi2 protein_coding protein_coding MGP_LPJ_T0020052.1 MGP_LPJ_G0015992.1 mouse_genomes_project 1 61357038 61429132 + MGP_LPJ_P0020052 Abi2 protein_coding protein_coding MGP_LPJ_T0020053.1 MGP_LPJ_G0015992.1 mouse_genomes_project 1 61357085 61392449 + Abi2 protein_coding retained_intron MGP_LPJ_T0020054.1 MGP_LPJ_G0015992.1 mouse_genomes_project 1 61357099 61394975 + MGP_LPJ_P0020054 Abi2 protein_coding protein_coding MGP_LPJ_T0020055.1 MGP_LPJ_G0015992.1 mouse_genomes_project 1 61357107 61426772 + MGP_LPJ_P0020055 Abi2 protein_coding protein_coding MGP_LPJ_T0020056.1 MGP_LPJ_G0015992.1 mouse_genomes_project 1 61357112 61381181 + Abi2 protein_coding retained_intron MGP_LPJ_T0020057.1 MGP_LPJ_G0015992.1 mouse_genomes_project 1 61384758 61427372 + MGP_LPJ_P0020057 Abi2 protein_coding protein_coding MGP_LPJ_T0020058.1 MGP_LPJ_G0015992.1 mouse_genomes_project 1 61384882 61426534 + MGP_LPJ_P0020058 Abi2 protein_coding protein_coding MGP_LPJ_T0020059.1 MGP_LPJ_G0015992.1 mouse_genomes_project 1 61384887 61426697 + MGP_LPJ_P0020059 Abi2 protein_coding protein_coding MGP_LPJ_T0020060.1 MGP_LPJ_G0015992.1 mouse_genomes_project 1 61386617 61426918 + MGP_LPJ_P0020060 Abi2 protein_coding protein_coding MGP_LPJ_T0011858.1 MGP_LPJ_G0009949.1 mouse_genomes_project 1 419656 420136 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002867.1 MGP_LPJ_G0002709.1 mouse_genomes_project 1 80179853 80194315 - Gm28410 antisense antisense MGP_LPJ_T0100031.1 MGP_LPJ_G0038294.1 mouse_genomes_project 1 167376307 167376387 + Gm26224 snoRNA snoRNA MGP_LPJ_T0002861.1 MGP_LPJ_G0002704.1 mouse_genomes_project 1 76637710 76642985 + Gm15841 antisense antisense MGP_LPJ_T0012253.1 MGP_LPJ_G0010344.1 mouse_genomes_project 1 144006652 144006875 - processed_pseudogene processed_pseudogene MGP_LPJ_T0021455.1 MGP_LPJ_G0016274.1 mouse_genomes_project 1 98550719 98633929 - MGP_LPJ_P0021455 St8sia4 protein_coding protein_coding MGP_LPJ_T0021456.1 MGP_LPJ_G0016274.1 mouse_genomes_project 1 98584430 98633893 - MGP_LPJ_P0021456 St8sia4 protein_coding protein_coding MGP_LPJ_T0021457.1 MGP_LPJ_G0016274.1 mouse_genomes_project 1 98624685 98633926 - St8sia4 protein_coding retained_intron MGP_LPJ_T0021458.1 MGP_LPJ_G0016274.1 mouse_genomes_project 1 98630322 98633923 - St8sia4 protein_coding retained_intron MGP_LPJ_T0006035.1 MGP_LPJ_G0005055.1 mouse_genomes_project 1 189641854 189643470 - Gm5533 lincRNA lincRNA MGP_LPJ_T0099973.1 MGP_LPJ_G0038236.1 mouse_genomes_project 1 38659548 38659678 - Gm23722 snoRNA snoRNA MGP_LPJ_T0009576.1 MGP_LPJ_G0007694.1 mouse_genomes_project 1 193186767 193186834 + Mir194-1 miRNA miRNA MGP_LPJ_T0021831.1 MGP_LPJ_G0016353.1 mouse_genomes_project 1 135081820 135167999 - MGP_LPJ_P0021831 protein_coding protein_coding MGP_LPJ_T0021832.1 MGP_LPJ_G0016353.1 mouse_genomes_project 1 135082934 135107913 - protein_coding retained_intron MGP_LPJ_T0021833.1 MGP_LPJ_G0016353.1 mouse_genomes_project 1 135105292 135167986 - protein_coding retained_intron MGP_LPJ_T0021834.1 MGP_LPJ_G0016353.1 mouse_genomes_project 1 135105292 135153280 - MGP_LPJ_P0021834 protein_coding protein_coding MGP_LPJ_T0021835.1 MGP_LPJ_G0016353.1 mouse_genomes_project 1 135162193 135167706 - protein_coding processed_transcript MGP_LPJ_T0000556.1 MGP_LPJ_G0000491.1 mouse_genomes_project 1 77167730 77169921 - TEC TEC MGP_LPJ_T0000622.1 MGP_LPJ_G0000557.1 mouse_genomes_project 1 114611532 114614279 - TEC TEC MGP_LPJ_T0022516.1 MGP_LPJ_G0016499.1 mouse_genomes_project 1 157208610 157225048 + Trmt1l protein_coding retained_intron MGP_LPJ_T0022517.1 MGP_LPJ_G0016499.1 mouse_genomes_project 1 157208610 157240997 + MGP_LPJ_P0022517 Trmt1l protein_coding protein_coding MGP_LPJ_T0022518.1 MGP_LPJ_G0016499.1 mouse_genomes_project 1 157208705 157216879 + Trmt1l protein_coding retained_intron MGP_LPJ_T0022519.1 MGP_LPJ_G0016499.1 mouse_genomes_project 1 157208710 157232865 + Trmt1l protein_coding retained_intron MGP_LPJ_T0022520.1 MGP_LPJ_G0016499.1 mouse_genomes_project 1 157208716 157210687 + Trmt1l protein_coding retained_intron MGP_LPJ_T0022521.1 MGP_LPJ_G0016499.1 mouse_genomes_project 1 157208735 157216879 + Trmt1l protein_coding retained_intron MGP_LPJ_T0022522.1 MGP_LPJ_G0016499.1 mouse_genomes_project 1 157208774 157240997 + MGP_LPJ_P0022522 Trmt1l protein_coding nonsense_mediated_decay MGP_LPJ_T0012208.1 MGP_LPJ_G0010299.1 mouse_genomes_project 1 123231854 123232834 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011941.1 MGP_LPJ_G0010032.1 mouse_genomes_project 1 24140270 24142104 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000580.1 MGP_LPJ_G0000515.1 mouse_genomes_project 1 86915656 86920371 - TEC TEC MGP_LPJ_T0012195.1 MGP_LPJ_G0010286.1 mouse_genomes_project 1 116173697 116174366 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000465.1 MGP_LPJ_G0000401.1 mouse_genomes_project 1 31165870 31169271 + TEC TEC MGP_LPJ_T0005853.1 MGP_LPJ_G0004909.1 mouse_genomes_project 1 92904522 92907977 + Gm28723 lincRNA lincRNA MGP_LPJ_T0023429.1 MGP_LPJ_G0016684.1 mouse_genomes_project 1 178540139 178554180 - MGP_LPJ_P0023429 Slamf7 protein_coding protein_coding MGP_LPJ_T0023430.1 MGP_LPJ_G0016684.1 mouse_genomes_project 1 178540933 178554260 - MGP_LPJ_P0023430 Slamf7 protein_coding protein_coding MGP_LPJ_T0023431.1 MGP_LPJ_G0016684.1 mouse_genomes_project 1 178541446 178554180 - MGP_LPJ_P0023431 Slamf7 protein_coding protein_coding MGP_LPJ_T0100009.1 MGP_LPJ_G0038272.1 mouse_genomes_project 1 113238954 113239084 - Gm22159 snoRNA snoRNA MGP_LPJ_T0019710.1 MGP_LPJ_G0015927.1 mouse_genomes_project 1 52907711 52979356 - MGP_LPJ_P0019710 1700019D03Rik protein_coding protein_coding MGP_LPJ_T0019711.1 MGP_LPJ_G0015927.1 mouse_genomes_project 1 52907715 52956324 - MGP_LPJ_P0019711 1700019D03Rik protein_coding protein_coding MGP_LPJ_T0019712.1 MGP_LPJ_G0015927.1 mouse_genomes_project 1 52907716 52943349 - MGP_LPJ_P0019712 1700019D03Rik protein_coding protein_coding MGP_LPJ_T0019713.1 MGP_LPJ_G0015927.1 mouse_genomes_project 1 52907726 52956324 - MGP_LPJ_P0019713 1700019D03Rik protein_coding protein_coding MGP_LPJ_T0011281.1 MGP_LPJ_G0009399.1 mouse_genomes_project 1 203560832 203560930 - Gm27940 misc_RNA misc_RNA MGP_LPJ_T0018964.1 MGP_LPJ_G0015780.1 mouse_genomes_project 1 16020525 16021496 - MGP_LPJ_P0018964 Defb18 protein_coding protein_coding MGP_LPJ_T0101712.1 MGP_LPJ_G0039750.1 mouse_genomes_project 1 110800199 110813029 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0021460.1 MGP_LPJ_G0016276.1 mouse_genomes_project 1 100075933 100146677 - MGP_LPJ_P0021460 Slco6c1 protein_coding protein_coding MGP_LPJ_T0021461.1 MGP_LPJ_G0016276.1 mouse_genomes_project 1 100076521 100146772 - MGP_LPJ_P0021461 Slco6c1 protein_coding protein_coding MGP_LPJ_T0012266.1 MGP_LPJ_G0010357.1 mouse_genomes_project 1 149703208 149703613 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016966.1 MGP_LPJ_G0015025.1 mouse_genomes_project 1 137258741 137269357 - 6030442K20Rik processed_transcript antisense MGP_LPJ_T0016967.1 MGP_LPJ_G0015025.1 mouse_genomes_project 1 137268370 137269376 - 6030442K20Rik processed_transcript retained_intron MGP_LPJ_T0000768.1 MGP_LPJ_G0000701.1 mouse_genomes_project 1 172417076 172419965 - TEC TEC MGP_LPJ_T0020147.1 MGP_LPJ_G0016010.1 mouse_genomes_project 1 65610053 65677912 + MGP_LPJ_P0020147 Creb1 protein_coding protein_coding MGP_LPJ_T0020148.1 MGP_LPJ_G0016010.1 mouse_genomes_project 1 65610212 65640383 + Creb1 protein_coding retained_intron MGP_LPJ_T0020149.1 MGP_LPJ_G0016010.1 mouse_genomes_project 1 65610217 65659076 + MGP_LPJ_P0020149 Creb1 protein_coding protein_coding MGP_LPJ_T0020150.1 MGP_LPJ_G0016010.1 mouse_genomes_project 1 65610227 65684764 + MGP_LPJ_P0020150 Creb1 protein_coding protein_coding MGP_LPJ_T0020151.1 MGP_LPJ_G0016010.1 mouse_genomes_project 1 65610240 65655973 + Creb1 protein_coding processed_transcript MGP_LPJ_T0020152.1 MGP_LPJ_G0016010.1 mouse_genomes_project 1 65610267 65677684 + MGP_LPJ_P0020152 Creb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0020153.1 MGP_LPJ_G0016010.1 mouse_genomes_project 1 65610353 65683075 + MGP_LPJ_P0020153 Creb1 protein_coding protein_coding MGP_LPJ_T0020154.1 MGP_LPJ_G0016010.1 mouse_genomes_project 1 65641959 65643601 + Creb1 protein_coding retained_intron MGP_LPJ_T0020155.1 MGP_LPJ_G0016010.1 mouse_genomes_project 1 65657247 65660009 + Creb1 protein_coding retained_intron MGP_LPJ_T0021120.1 MGP_LPJ_G0016198.1 mouse_genomes_project 1 90694552 90703609 + MGP_LPJ_P0021120 Ugt1a1 protein_coding protein_coding MGP_LPJ_T0005930.1 MGP_LPJ_G0004973.1 mouse_genomes_project 1 139594634 139598891 - Gm26783 lincRNA lincRNA MGP_LPJ_T0101469.1 MGP_LPJ_G0039621.1 mouse_genomes_project 1 99914218 100012257 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101470.1 MGP_LPJ_G0039621.1 mouse_genomes_project 1 99931077 100011917 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0005818.1 MGP_LPJ_G0004879.1 mouse_genomes_project 1 78187429 78290837 + Gm29069 lincRNA lincRNA MGP_LPJ_T0101720.1 MGP_LPJ_G0039758.1 mouse_genomes_project 1 145239298 145291235 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0021927.1 MGP_LPJ_G0016378.1 mouse_genomes_project 1 136555014 136579047 + MGP_LPJ_P0021927 Pm20d1 protein_coding protein_coding MGP_LPJ_T0021928.1 MGP_LPJ_G0016378.1 mouse_genomes_project 1 136555031 136579059 + MGP_LPJ_P0021928 Pm20d1 protein_coding protein_coding MGP_LPJ_T0021929.1 MGP_LPJ_G0016378.1 mouse_genomes_project 1 136569763 136574010 + MGP_LPJ_P0021929 Pm20d1 protein_coding protein_coding MGP_LPJ_T0021930.1 MGP_LPJ_G0016378.1 mouse_genomes_project 1 136569801 136570039 + Pm20d1 protein_coding processed_transcript MGP_LPJ_T0011871.1 MGP_LPJ_G0009962.1 mouse_genomes_project 1 2856918 2857312 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006049.1 MGP_LPJ_G0005064.1 mouse_genomes_project 1 192205420 192211370 - Gm37712 lincRNA lincRNA MGP_LPJ_T0023278.1 MGP_LPJ_G0016655.1 mouse_genomes_project 1 177825832 177845444 - MGP_LPJ_P0023278 Fcgr2b protein_coding protein_coding MGP_LPJ_T0023279.1 MGP_LPJ_G0016655.1 mouse_genomes_project 1 177829086 177845444 - MGP_LPJ_P0023279 Fcgr2b protein_coding protein_coding MGP_LPJ_T0023280.1 MGP_LPJ_G0016655.1 mouse_genomes_project 1 177829260 177830157 - Fcgr2b protein_coding processed_transcript MGP_LPJ_T0023281.1 MGP_LPJ_G0016655.1 mouse_genomes_project 1 177829295 177845880 - MGP_LPJ_P0023281 Fcgr2b protein_coding protein_coding MGP_LPJ_T0023282.1 MGP_LPJ_G0016655.1 mouse_genomes_project 1 177829519 177845444 - MGP_LPJ_P0023282 Fcgr2b protein_coding protein_coding MGP_LPJ_T0023283.1 MGP_LPJ_G0016655.1 mouse_genomes_project 1 177833643 177845444 - Fcgr2b protein_coding retained_intron MGP_LPJ_T0023284.1 MGP_LPJ_G0016655.1 mouse_genomes_project 1 177838569 177845444 - Fcgr2b protein_coding retained_intron MGP_LPJ_T0019095.1 MGP_LPJ_G0015813.1 mouse_genomes_project 1 29733612 29735065 + MGP_LPJ_P0019095 Pih1d3 protein_coding protein_coding MGP_LPJ_T0000420.1 MGP_LPJ_G0000358.1 mouse_genomes_project 1 11205718 11206927 - TEC TEC MGP_LPJ_T0021563.1 MGP_LPJ_G0016299.1 mouse_genomes_project 1 110880981 110893967 + MGP_LPJ_P0021563 Serpinb11 protein_coding protein_coding MGP_LPJ_T0021564.1 MGP_LPJ_G0016299.1 mouse_genomes_project 1 110881712 110900258 + MGP_LPJ_P0021564 Serpinb11 protein_coding protein_coding MGP_LPJ_T0023638.1 MGP_LPJ_G0016757.1 mouse_genomes_project 1 182994071 183043010 + Wdr64 protein_coding processed_transcript MGP_LPJ_T0023639.1 MGP_LPJ_G0016757.1 mouse_genomes_project 1 182994071 183113468 + MGP_LPJ_P0023639 Wdr64 protein_coding protein_coding MGP_LPJ_T0023640.1 MGP_LPJ_G0016757.1 mouse_genomes_project 1 182994071 183113468 + MGP_LPJ_P0023640 Wdr64 protein_coding protein_coding MGP_LPJ_T0023641.1 MGP_LPJ_G0016757.1 mouse_genomes_project 1 182994267 183113100 + MGP_LPJ_P0023641 Wdr64 protein_coding protein_coding MGP_LPJ_T0023642.1 MGP_LPJ_G0016757.1 mouse_genomes_project 1 183067307 183113465 + MGP_LPJ_P0023642 Wdr64 protein_coding nonsense_mediated_decay MGP_LPJ_T0005740.1 MGP_LPJ_G0004821.1 mouse_genomes_project 1 43089204 43089703 - Gm29156 lincRNA lincRNA MGP_LPJ_T0021777.1 MGP_LPJ_G0016343.1 mouse_genomes_project 1 132446231 132512080 + MGP_LPJ_P0021777 Rab3gap1 protein_coding unknown_likely_coding MGP_LPJ_T0021778.1 MGP_LPJ_G0016343.1 mouse_genomes_project 1 132446267 132512072 + MGP_LPJ_P0021778 Rab3gap1 protein_coding protein_coding MGP_LPJ_T0021779.1 MGP_LPJ_G0016343.1 mouse_genomes_project 1 132446296 132470617 + Rab3gap1 protein_coding retained_intron MGP_LPJ_T0021780.1 MGP_LPJ_G0016343.1 mouse_genomes_project 1 132467507 132472520 + Rab3gap1 protein_coding retained_intron MGP_LPJ_T0021781.1 MGP_LPJ_G0016343.1 mouse_genomes_project 1 132490280 132493476 + Rab3gap1 protein_coding retained_intron MGP_LPJ_T0021782.1 MGP_LPJ_G0016343.1 mouse_genomes_project 1 132506419 132511116 + Rab3gap1 protein_coding processed_transcript MGP_LPJ_T0098784.1 MGP_LPJ_G0037047.1 mouse_genomes_project 1 141758355 141758453 + Gm24086 snRNA snRNA MGP_LPJ_T0022021.1 MGP_LPJ_G0016397.1 mouse_genomes_project 1 137781504 137854617 - MGP_LPJ_P0022021 Mdm4 protein_coding protein_coding MGP_LPJ_T0022022.1 MGP_LPJ_G0016397.1 mouse_genomes_project 1 137783673 137796383 - Mdm4 protein_coding processed_transcript MGP_LPJ_T0022023.1 MGP_LPJ_G0016397.1 mouse_genomes_project 1 137809785 137854695 - MGP_LPJ_P0022023 Mdm4 protein_coding protein_coding MGP_LPJ_T0022024.1 MGP_LPJ_G0016397.1 mouse_genomes_project 1 137815362 137854627 - MGP_LPJ_P0022024 Mdm4 protein_coding protein_coding MGP_LPJ_T0022025.1 MGP_LPJ_G0016397.1 mouse_genomes_project 1 137815918 137854636 - MGP_LPJ_P0022025 Mdm4 protein_coding nonsense_mediated_decay MGP_LPJ_T0022026.1 MGP_LPJ_G0016397.1 mouse_genomes_project 1 137817087 137854633 - MGP_LPJ_P0022026 Mdm4 protein_coding nonsense_mediated_decay MGP_LPJ_T0022027.1 MGP_LPJ_G0016397.1 mouse_genomes_project 1 137817214 137854635 - MGP_LPJ_P0022027 Mdm4 protein_coding protein_coding MGP_LPJ_T0022028.1 MGP_LPJ_G0016397.1 mouse_genomes_project 1 137822501 137844773 - Mdm4 protein_coding processed_transcript MGP_LPJ_T0022029.1 MGP_LPJ_G0016397.1 mouse_genomes_project 1 137822504 137830151 - Mdm4 protein_coding retained_intron MGP_LPJ_T0022030.1 MGP_LPJ_G0016397.1 mouse_genomes_project 1 137825324 137827274 - Mdm4 protein_coding retained_intron MGP_LPJ_T0022031.1 MGP_LPJ_G0016397.1 mouse_genomes_project 1 137827022 137829954 - Mdm4 protein_coding retained_intron MGP_LPJ_T0022032.1 MGP_LPJ_G0016397.1 mouse_genomes_project 1 137834912 137854609 - Mdm4 protein_coding retained_intron MGP_LPJ_T0022033.1 MGP_LPJ_G0016397.1 mouse_genomes_project 1 137834966 137861491 - MGP_LPJ_P0022033 Mdm4 protein_coding protein_coding MGP_LPJ_T0022034.1 MGP_LPJ_G0016397.1 mouse_genomes_project 1 137843615 137854617 - Mdm4 protein_coding retained_intron MGP_LPJ_T0021934.1 MGP_LPJ_G0016380.1 mouse_genomes_project 1 136624059 136629490 + MGP_LPJ_P0021934 Rab29 protein_coding protein_coding MGP_LPJ_T0021935.1 MGP_LPJ_G0016380.1 mouse_genomes_project 1 136624075 136629638 + MGP_LPJ_P0021935 Rab29 protein_coding protein_coding MGP_LPJ_T0021936.1 MGP_LPJ_G0016380.1 mouse_genomes_project 1 136624346 136629253 + MGP_LPJ_P0021936 Rab29 protein_coding nonsense_mediated_decay MGP_LPJ_T0021937.1 MGP_LPJ_G0016380.1 mouse_genomes_project 1 136624488 136627777 + Rab29 protein_coding retained_intron MGP_LPJ_T0012279.1 MGP_LPJ_G0010370.1 mouse_genomes_project 1 154786023 154787559 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021124.1 MGP_LPJ_G0016200.1 mouse_genomes_project 1 90782804 90804910 - MGP_LPJ_P0021124 Hjurp protein_coding protein_coding MGP_LPJ_T0021125.1 MGP_LPJ_G0016200.1 mouse_genomes_project 1 90785156 90804834 - MGP_LPJ_P0021125 Hjurp protein_coding protein_coding MGP_LPJ_T0021126.1 MGP_LPJ_G0016200.1 mouse_genomes_project 1 90785306 90804783 - MGP_LPJ_P0021126 Hjurp protein_coding protein_coding MGP_LPJ_T0021127.1 MGP_LPJ_G0016200.1 mouse_genomes_project 1 90789571 90793778 - MGP_LPJ_P0021127 Hjurp protein_coding protein_coding MGP_LPJ_T0021128.1 MGP_LPJ_G0016200.1 mouse_genomes_project 1 90793763 90797213 - Hjurp protein_coding retained_intron MGP_LPJ_T0021129.1 MGP_LPJ_G0016200.1 mouse_genomes_project 1 90801187 90804856 - Hjurp protein_coding retained_intron MGP_LPJ_T0020507.1 MGP_LPJ_G0016082.1 mouse_genomes_project 1 76637410 76671857 - MGP_LPJ_P0020507 Ccdc108 protein_coding protein_coding MGP_LPJ_T0020508.1 MGP_LPJ_G0016082.1 mouse_genomes_project 1 76658570 76671852 - Ccdc108 protein_coding retained_intron MGP_LPJ_T0020509.1 MGP_LPJ_G0016082.1 mouse_genomes_project 1 76659659 76671850 - Ccdc108 protein_coding retained_intron MGP_LPJ_T0101679.1 MGP_LPJ_G0039717.1 mouse_genomes_project 1 19305446 19306543 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0012355.1 MGP_LPJ_G0010446.1 mouse_genomes_project 1 191210720 191211112 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005962.1 MGP_LPJ_G0004999.1 mouse_genomes_project 1 159953323 159956871 + lincRNA lincRNA MGP_LPJ_T0002921.1 MGP_LPJ_G0002750.1 mouse_genomes_project 1 140134861 140135705 + Gm15445 antisense antisense MGP_LPJ_T0005913.1 MGP_LPJ_G0004957.1 mouse_genomes_project 1 125531029 125535939 - 2210011K15Rik lincRNA lincRNA MGP_LPJ_T0003025.1 MGP_LPJ_G0002833.1 mouse_genomes_project 1 201469928 201494029 + 4930570N18Rik antisense antisense MGP_LPJ_T0099997.1 MGP_LPJ_G0038260.1 mouse_genomes_project 1 88710360 88710440 - Gm24148 snoRNA snoRNA MGP_LPJ_T0101676.1 MGP_LPJ_G0039714.1 mouse_genomes_project 1 15993444 16007064 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0011987.1 MGP_LPJ_G0010078.1 mouse_genomes_project 1 39474895 39475580 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002988.1 MGP_LPJ_G0002806.1 mouse_genomes_project 1 188536098 188539180 + H3f3aos antisense antisense MGP_LPJ_T0002989.1 MGP_LPJ_G0002806.1 mouse_genomes_project 1 188536104 188539009 + H3f3aos antisense antisense MGP_LPJ_T0000789.1 MGP_LPJ_G0000722.1 mouse_genomes_project 1 184492925 184494218 - TEC TEC MGP_LPJ_T0012171.1 MGP_LPJ_G0010262.1 mouse_genomes_project 1 109353311 109353845 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023610.1 MGP_LPJ_G0016750.1 mouse_genomes_project 1 181717478 182081023 + MGP_LPJ_P0023610 Fmn2 protein_coding protein_coding MGP_LPJ_T0023611.1 MGP_LPJ_G0016750.1 mouse_genomes_project 1 181761200 181810339 + Fmn2 protein_coding processed_transcript MGP_LPJ_T0023612.1 MGP_LPJ_G0016750.1 mouse_genomes_project 1 181841928 181848178 + Fmn2 protein_coding processed_transcript MGP_LPJ_T0023613.1 MGP_LPJ_G0016750.1 mouse_genomes_project 1 181841929 181931387 + MGP_LPJ_P0023613 Fmn2 protein_coding protein_coding MGP_LPJ_T0023614.1 MGP_LPJ_G0016750.1 mouse_genomes_project 1 181844681 181940901 + Fmn2 protein_coding retained_intron MGP_LPJ_T0023615.1 MGP_LPJ_G0016750.1 mouse_genomes_project 1 181953020 182079562 + Fmn2 protein_coding processed_transcript MGP_LPJ_T0021871.1 MGP_LPJ_G0016364.1 mouse_genomes_project 1 135623498 135627215 - MGP_LPJ_P0021871 Il20 protein_coding protein_coding MGP_LPJ_T0021872.1 MGP_LPJ_G0016364.1 mouse_genomes_project 1 135623928 135626990 - MGP_LPJ_P0021872 Il20 protein_coding protein_coding MGP_LPJ_T0012333.1 MGP_LPJ_G0010424.1 mouse_genomes_project 1 178646769 178647321 + processed_pseudogene processed_pseudogene MGP_LPJ_T0020036.1 MGP_LPJ_G0015990.1 mouse_genomes_project 1 61114981 61282165 + MGP_LPJ_P0020036 Nbeal1 protein_coding protein_coding MGP_LPJ_T0020037.1 MGP_LPJ_G0015990.1 mouse_genomes_project 1 61115194 61120281 + Nbeal1 protein_coding retained_intron MGP_LPJ_T0020038.1 MGP_LPJ_G0015990.1 mouse_genomes_project 1 61156331 61170376 + MGP_LPJ_P0020038 Nbeal1 protein_coding protein_coding MGP_LPJ_T0020039.1 MGP_LPJ_G0015990.1 mouse_genomes_project 1 61161351 61164028 + Nbeal1 protein_coding retained_intron MGP_LPJ_T0020040.1 MGP_LPJ_G0015990.1 mouse_genomes_project 1 61170278 61220444 + Nbeal1 protein_coding retained_intron MGP_LPJ_T0020041.1 MGP_LPJ_G0015990.1 mouse_genomes_project 1 61198602 61263411 + MGP_LPJ_P0020041 Nbeal1 protein_coding protein_coding MGP_LPJ_T0020042.1 MGP_LPJ_G0015990.1 mouse_genomes_project 1 61198610 61275317 + MGP_LPJ_P0020042 Nbeal1 protein_coding nonsense_mediated_decay MGP_LPJ_T0020043.1 MGP_LPJ_G0015990.1 mouse_genomes_project 1 61204435 61207653 + Nbeal1 protein_coding retained_intron MGP_LPJ_T0020044.1 MGP_LPJ_G0015990.1 mouse_genomes_project 1 61217175 61230129 + MGP_LPJ_P0020044 Nbeal1 protein_coding protein_coding MGP_LPJ_T0020045.1 MGP_LPJ_G0015990.1 mouse_genomes_project 1 61222340 61224602 + Nbeal1 protein_coding retained_intron MGP_LPJ_T0000740.1 MGP_LPJ_G0000673.1 mouse_genomes_project 1 165486257 165489097 + TEC TEC MGP_LPJ_T0098089.1 MGP_LPJ_G0036370.1 mouse_genomes_project 1 108237727 108237839 - n-R5s216 rRNA rRNA MGP_LPJ_T0012216.1 MGP_LPJ_G0010307.1 mouse_genomes_project 1 125000736 125000946 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003005.1 MGP_LPJ_G0002820.1 mouse_genomes_project 1 197938066 197941530 - Gm26574 antisense antisense MGP_LPJ_T0021979.1 MGP_LPJ_G0016388.1 mouse_genomes_project 1 137083513 137092236 + MGP_LPJ_P0021979 Klhdc8a protein_coding protein_coding MGP_LPJ_T0098769.1 MGP_LPJ_G0037032.1 mouse_genomes_project 1 109343070 109343177 + Gm26214 snRNA snRNA MGP_LPJ_T0005999.1 MGP_LPJ_G0005026.1 mouse_genomes_project 1 171604899 171608990 - 4930568G15Rik lincRNA lincRNA MGP_LPJ_T0006000.1 MGP_LPJ_G0005026.1 mouse_genomes_project 1 171607492 171632560 - 4930568G15Rik lincRNA lincRNA MGP_LPJ_T0023800.1 MGP_LPJ_G0016785.1 mouse_genomes_project 1 188125492 188177605 - MGP_LPJ_P0023800 Stum protein_coding protein_coding MGP_LPJ_T0023801.1 MGP_LPJ_G0016785.1 mouse_genomes_project 1 188132476 188177642 - MGP_LPJ_P0023801 Stum protein_coding protein_coding MGP_LPJ_T0020995.1 MGP_LPJ_G0016173.1 mouse_genomes_project 1 89547369 89556230 - MGP_LPJ_P0020995 Ecel1 protein_coding protein_coding MGP_LPJ_T0020996.1 MGP_LPJ_G0016173.1 mouse_genomes_project 1 89547372 89554736 - MGP_LPJ_P0020996 Ecel1 protein_coding protein_coding MGP_LPJ_T0020997.1 MGP_LPJ_G0016173.1 mouse_genomes_project 1 89547376 89555874 - MGP_LPJ_P0020997 Ecel1 protein_coding protein_coding MGP_LPJ_T0020998.1 MGP_LPJ_G0016173.1 mouse_genomes_project 1 89547596 89548631 - Ecel1 protein_coding retained_intron MGP_LPJ_T0020999.1 MGP_LPJ_G0016173.1 mouse_genomes_project 1 89554731 89555020 - Ecel1 protein_coding processed_transcript MGP_LPJ_T0100015.1 MGP_LPJ_G0038278.1 mouse_genomes_project 1 131928740 131928849 + Gm23734 snoRNA snoRNA MGP_LPJ_T0011985.1 MGP_LPJ_G0010076.1 mouse_genomes_project 1 37959614 37960386 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021706.1 MGP_LPJ_G0016329.1 mouse_genomes_project 1 125610799 125690198 + MGP_LPJ_P0021706 Ccdc93 protein_coding protein_coding MGP_LPJ_T0021707.1 MGP_LPJ_G0016329.1 mouse_genomes_project 1 125610825 125630955 + Ccdc93 protein_coding retained_intron MGP_LPJ_T0021708.1 MGP_LPJ_G0016329.1 mouse_genomes_project 1 125610845 125631648 + Ccdc93 protein_coding processed_transcript MGP_LPJ_T0021709.1 MGP_LPJ_G0016329.1 mouse_genomes_project 1 125610858 125625918 + Ccdc93 protein_coding processed_transcript MGP_LPJ_T0021710.1 MGP_LPJ_G0016329.1 mouse_genomes_project 1 125610860 125684407 + MGP_LPJ_P0021710 Ccdc93 protein_coding protein_coding MGP_LPJ_T0021711.1 MGP_LPJ_G0016329.1 mouse_genomes_project 1 125674029 125682301 + Ccdc93 protein_coding retained_intron MGP_LPJ_T0019340.1 MGP_LPJ_G0015855.1 mouse_genomes_project 1 36741836 36860545 - MGP_LPJ_P0019340 Tsga10 protein_coding protein_coding MGP_LPJ_T0019341.1 MGP_LPJ_G0015855.1 mouse_genomes_project 1 36749279 36861895 - MGP_LPJ_P0019341 Tsga10 protein_coding protein_coding MGP_LPJ_T0019342.1 MGP_LPJ_G0015855.1 mouse_genomes_project 1 36749279 36850840 - MGP_LPJ_P0019342 Tsga10 protein_coding protein_coding MGP_LPJ_T0019343.1 MGP_LPJ_G0015855.1 mouse_genomes_project 1 36793727 36850813 - MGP_LPJ_P0019343 Tsga10 protein_coding nonsense_mediated_decay MGP_LPJ_T0019344.1 MGP_LPJ_G0015855.1 mouse_genomes_project 1 36827297 36860302 - MGP_LPJ_P0019344 Tsga10 protein_coding protein_coding MGP_LPJ_T0019345.1 MGP_LPJ_G0015855.1 mouse_genomes_project 1 36828329 36860539 - MGP_LPJ_P0019345 Tsga10 protein_coding protein_coding MGP_LPJ_T0019346.1 MGP_LPJ_G0015855.1 mouse_genomes_project 1 36829165 36860539 - MGP_LPJ_P0019346 Tsga10 protein_coding protein_coding MGP_LPJ_T0019347.1 MGP_LPJ_G0015855.1 mouse_genomes_project 1 36834884 36839181 - Tsga10 protein_coding retained_intron MGP_LPJ_T0018969.1 MGP_LPJ_G0015783.1 mouse_genomes_project 1 17028540 17059585 + MGP_LPJ_P0018969 Tfap2b protein_coding protein_coding MGP_LPJ_T0018970.1 MGP_LPJ_G0015783.1 mouse_genomes_project 1 17028586 17059092 + MGP_LPJ_P0018970 Tfap2b protein_coding protein_coding MGP_LPJ_T0018971.1 MGP_LPJ_G0015783.1 mouse_genomes_project 1 17031641 17055635 + MGP_LPJ_P0018971 Tfap2b protein_coding protein_coding MGP_LPJ_T0018972.1 MGP_LPJ_G0015783.1 mouse_genomes_project 1 17031885 17034024 + Tfap2b protein_coding retained_intron MGP_LPJ_T0018973.1 MGP_LPJ_G0015783.1 mouse_genomes_project 1 17033460 17038830 + Tfap2b protein_coding retained_intron MGP_LPJ_T0005724.1 MGP_LPJ_G0004816.1 mouse_genomes_project 1 41589237 41615785 - Gm28140 lincRNA lincRNA MGP_LPJ_T0012111.1 MGP_LPJ_G0010202.1 mouse_genomes_project 1 81916286 81916764 + processed_pseudogene processed_pseudogene MGP_LPJ_T0023075.1 MGP_LPJ_G0016606.1 mouse_genomes_project 1 171684362 171708405 - MGP_LPJ_P0023075 Tbx19 protein_coding protein_coding MGP_LPJ_T0023076.1 MGP_LPJ_G0016606.1 mouse_genomes_project 1 171685454 171701362 - MGP_LPJ_P0023076 Tbx19 protein_coding protein_coding MGP_LPJ_T0002798.1 MGP_LPJ_G0002659.1 mouse_genomes_project 1 33329973 33330483 - 1700101I19Rik antisense antisense MGP_LPJ_T0002799.1 MGP_LPJ_G0002659.1 mouse_genomes_project 1 33329995 33330385 - 1700101I19Rik antisense antisense MGP_LPJ_T0022319.1 MGP_LPJ_G0016461.1 mouse_genomes_project 1 141511639 141541777 + Kif14 protein_coding retained_intron MGP_LPJ_T0022320.1 MGP_LPJ_G0016461.1 mouse_genomes_project 1 141513231 141579799 + MGP_LPJ_P0022320 Kif14 protein_coding protein_coding MGP_LPJ_T0022321.1 MGP_LPJ_G0016461.1 mouse_genomes_project 1 141513231 141574798 + MGP_LPJ_P0022321 Kif14 protein_coding nonsense_mediated_decay MGP_LPJ_T0022322.1 MGP_LPJ_G0016461.1 mouse_genomes_project 1 141513254 141579799 + MGP_LPJ_P0022322 Kif14 protein_coding protein_coding MGP_LPJ_T0022323.1 MGP_LPJ_G0016461.1 mouse_genomes_project 1 141514299 141518038 + Kif14 protein_coding retained_intron MGP_LPJ_T0022324.1 MGP_LPJ_G0016461.1 mouse_genomes_project 1 141522465 141526043 + Kif14 protein_coding processed_transcript MGP_LPJ_T0022325.1 MGP_LPJ_G0016461.1 mouse_genomes_project 1 141522465 141526043 + Kif14 protein_coding processed_transcript MGP_LPJ_T0022326.1 MGP_LPJ_G0016461.1 mouse_genomes_project 1 141522465 141526043 + MGP_LPJ_P0022326 Kif14 protein_coding protein_coding MGP_LPJ_T0005959.1 MGP_LPJ_G0004996.1 mouse_genomes_project 1 157348163 157349860 - Gm28181 lincRNA lincRNA MGP_LPJ_T0000505.1 MGP_LPJ_G0000440.1 mouse_genomes_project 1 54278992 54280449 + TEC TEC MGP_LPJ_T0012308.1 MGP_LPJ_G0010399.1 mouse_genomes_project 1 168749951 168750381 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005747.1 MGP_LPJ_G0004827.1 mouse_genomes_project 1 50838028 50839493 + Gm28322 lincRNA lincRNA MGP_LPJ_T0000779.1 MGP_LPJ_G0000712.1 mouse_genomes_project 1 183248255 183250199 - TEC TEC MGP_LPJ_T0020189.1 MGP_LPJ_G0016022.1 mouse_genomes_project 1 66200851 66221371 - MGP_LPJ_P0020189 D630023F18Rik protein_coding protein_coding MGP_LPJ_T0020190.1 MGP_LPJ_G0016022.1 mouse_genomes_project 1 66202879 66221350 - MGP_LPJ_P0020190 D630023F18Rik protein_coding protein_coding MGP_LPJ_T0020191.1 MGP_LPJ_G0016022.1 mouse_genomes_project 1 66204282 66221271 - MGP_LPJ_P0020191 D630023F18Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0021452.1 MGP_LPJ_G0016272.1 mouse_genomes_project 1 96966756 96980968 - MGP_LPJ_P0021452 Pdcd1 protein_coding protein_coding MGP_LPJ_T0012051.1 MGP_LPJ_G0010142.1 mouse_genomes_project 1 59601250 59601701 + processed_pseudogene processed_pseudogene MGP_LPJ_T0019814.1 MGP_LPJ_G0015953.1 mouse_genomes_project 1 57474594 57660076 - MGP_LPJ_P0019814 Satb2 protein_coding protein_coding MGP_LPJ_T0019815.1 MGP_LPJ_G0015953.1 mouse_genomes_project 1 57474599 57657874 - MGP_LPJ_P0019815 Satb2 protein_coding protein_coding MGP_LPJ_T0019816.1 MGP_LPJ_G0015953.1 mouse_genomes_project 1 57474601 57656324 - MGP_LPJ_P0019816 Satb2 protein_coding protein_coding MGP_LPJ_T0019817.1 MGP_LPJ_G0015953.1 mouse_genomes_project 1 57634050 57656292 - MGP_LPJ_P0019817 Satb2 protein_coding protein_coding MGP_LPJ_T0019818.1 MGP_LPJ_G0015953.1 mouse_genomes_project 1 57656191 57667457 - MGP_LPJ_P0019818 Satb2 protein_coding protein_coding MGP_LPJ_T0012209.1 MGP_LPJ_G0010300.1 mouse_genomes_project 1 123316437 123317239 - processed_pseudogene processed_pseudogene MGP_LPJ_T0019171.1 MGP_LPJ_G0015825.1 mouse_genomes_project 1 33279660 33288502 + MGP_LPJ_P0019171 Cfc1 protein_coding protein_coding MGP_LPJ_T0022903.1 MGP_LPJ_G0016567.1 mouse_genomes_project 1 167435594 167481430 - Klhl20 protein_coding retained_intron MGP_LPJ_T0022904.1 MGP_LPJ_G0016567.1 mouse_genomes_project 1 167435594 167481430 - MGP_LPJ_P0022904 Klhl20 protein_coding protein_coding MGP_LPJ_T0022905.1 MGP_LPJ_G0016567.1 mouse_genomes_project 1 167435599 167481347 - MGP_LPJ_P0022905 Klhl20 protein_coding nonsense_mediated_decay MGP_LPJ_T0022906.1 MGP_LPJ_G0016567.1 mouse_genomes_project 1 167435617 167442866 - MGP_LPJ_P0022906 Klhl20 protein_coding nonsense_mediated_decay MGP_LPJ_T0022907.1 MGP_LPJ_G0016567.1 mouse_genomes_project 1 167444249 167481430 - Klhl20 protein_coding retained_intron MGP_LPJ_T0022908.1 MGP_LPJ_G0016567.1 mouse_genomes_project 1 167448974 167453187 - Klhl20 protein_coding retained_intron MGP_LPJ_T0022909.1 MGP_LPJ_G0016567.1 mouse_genomes_project 1 167455517 167481361 - Klhl20 protein_coding retained_intron MGP_LPJ_T0002877.1 MGP_LPJ_G0002719.1 mouse_genomes_project 1 94523392 94527801 - Gm29100 antisense antisense MGP_LPJ_T0002845.1 MGP_LPJ_G0002695.1 mouse_genomes_project 1 63459928 63504198 - Pard3bos3 antisense antisense MGP_LPJ_T0101682.1 MGP_LPJ_G0039720.1 mouse_genomes_project 1 53384650 53386821 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002770.1 MGP_LPJ_G0002642.1 mouse_genomes_project 1 3455751 3461179 - 4732440D04Rik antisense antisense MGP_LPJ_T0002771.1 MGP_LPJ_G0002642.1 mouse_genomes_project 1 3459178 3460476 - 4732440D04Rik antisense antisense MGP_LPJ_T0002772.1 MGP_LPJ_G0002642.1 mouse_genomes_project 1 3460497 3461178 - 4732440D04Rik antisense antisense MGP_LPJ_T0012252.1 MGP_LPJ_G0010343.1 mouse_genomes_project 1 143827455 143827777 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012347.1 MGP_LPJ_G0010438.1 mouse_genomes_project 1 188794073 188794720 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023875.1 MGP_LPJ_G0016804.1 mouse_genomes_project 1 189604877 189631754 - MGP_LPJ_P0023875 Lbr protein_coding protein_coding MGP_LPJ_T0023876.1 MGP_LPJ_G0016804.1 mouse_genomes_project 1 189604898 189610084 - Lbr protein_coding retained_intron MGP_LPJ_T0023877.1 MGP_LPJ_G0016804.1 mouse_genomes_project 1 189609421 189618336 - MGP_LPJ_P0023877 Lbr protein_coding protein_coding MGP_LPJ_T0023878.1 MGP_LPJ_G0016804.1 mouse_genomes_project 1 189611096 189618604 - Lbr protein_coding retained_intron MGP_LPJ_T0023879.1 MGP_LPJ_G0016804.1 mouse_genomes_project 1 189625364 189632421 - MGP_LPJ_P0023879 Lbr protein_coding protein_coding MGP_LPJ_T0023880.1 MGP_LPJ_G0016804.1 mouse_genomes_project 1 189625393 189631736 - MGP_LPJ_P0023880 Lbr protein_coding protein_coding MGP_LPJ_T0023881.1 MGP_LPJ_G0016804.1 mouse_genomes_project 1 189625544 189632234 - MGP_LPJ_P0023881 Lbr protein_coding protein_coding MGP_LPJ_T0023882.1 MGP_LPJ_G0016804.1 mouse_genomes_project 1 189627845 189631701 - MGP_LPJ_P0023882 Lbr protein_coding protein_coding MGP_LPJ_T0023541.1 MGP_LPJ_G0016708.1 mouse_genomes_project 1 179512205 179520765 + MGP_LPJ_P0023541 Vsig8 protein_coding protein_coding MGP_LPJ_T0023542.1 MGP_LPJ_G0016708.1 mouse_genomes_project 1 179516232 179520764 + MGP_LPJ_P0023542 Vsig8 protein_coding protein_coding MGP_LPJ_T0018736.1 MGP_LPJ_G0015739.1 mouse_genomes_project 1 5734226 6723590 - MGP_LPJ_P0018736 Sntg1 protein_coding protein_coding MGP_LPJ_T0018737.1 MGP_LPJ_G0015739.1 mouse_genomes_project 1 5734226 6722925 - MGP_LPJ_P0018737 Sntg1 protein_coding protein_coding MGP_LPJ_T0018738.1 MGP_LPJ_G0015739.1 mouse_genomes_project 1 5734226 6723216 - MGP_LPJ_P0018738 Sntg1 protein_coding protein_coding MGP_LPJ_T0018739.1 MGP_LPJ_G0015739.1 mouse_genomes_project 1 5735429 6724231 - MGP_LPJ_P0018739 Sntg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0018740.1 MGP_LPJ_G0015739.1 mouse_genomes_project 1 5735934 5851105 - Sntg1 protein_coding processed_transcript MGP_LPJ_T0018741.1 MGP_LPJ_G0015739.1 mouse_genomes_project 1 5736176 5851064 - Sntg1 protein_coding processed_transcript MGP_LPJ_T0018742.1 MGP_LPJ_G0015739.1 mouse_genomes_project 1 5736226 6172133 - MGP_LPJ_P0018742 Sntg1 protein_coding protein_coding MGP_LPJ_T0018743.1 MGP_LPJ_G0015739.1 mouse_genomes_project 1 6049256 6723634 - MGP_LPJ_P0018743 Sntg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0018744.1 MGP_LPJ_G0015739.1 mouse_genomes_project 1 6147383 6723861 - Sntg1 protein_coding retained_intron MGP_LPJ_T0018745.1 MGP_LPJ_G0015739.1 mouse_genomes_project 1 6338123 6344217 - Sntg1 protein_coding retained_intron MGP_LPJ_T0018746.1 MGP_LPJ_G0015739.1 mouse_genomes_project 1 6338381 6722578 - Sntg1 protein_coding processed_transcript MGP_LPJ_T0019193.1 MGP_LPJ_G0015831.1 mouse_genomes_project 1 34936443 34976212 + MGP_LPJ_P0019193 Hs6st1 protein_coding protein_coding MGP_LPJ_T0019194.1 MGP_LPJ_G0015831.1 mouse_genomes_project 1 34971459 34974746 + Hs6st1 protein_coding retained_intron MGP_LPJ_T0022850.1 MGP_LPJ_G0016560.1 mouse_genomes_project 1 166507266 166517770 - MGP_LPJ_P0022850 Cacybp protein_coding protein_coding MGP_LPJ_T0022851.1 MGP_LPJ_G0016560.1 mouse_genomes_project 1 166511013 166517700 - MGP_LPJ_P0022851 Cacybp protein_coding protein_coding MGP_LPJ_T0022852.1 MGP_LPJ_G0016560.1 mouse_genomes_project 1 166512982 166517621 - Cacybp protein_coding retained_intron MGP_LPJ_T0000445.1 MGP_LPJ_G0000381.1 mouse_genomes_project 1 23443106 23446293 - TEC TEC MGP_LPJ_T0012101.1 MGP_LPJ_G0010192.1 mouse_genomes_project 1 74941924 74942258 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023749.1 MGP_LPJ_G0016780.1 mouse_genomes_project 1 187460468 187461769 + MGP_LPJ_P0023749 Gm10518 protein_coding protein_coding MGP_LPJ_T0023010.1 MGP_LPJ_G0016588.1 mouse_genomes_project 1 169723599 169790313 - MGP_LPJ_P0023010 Prrx1 protein_coding protein_coding MGP_LPJ_T0023011.1 MGP_LPJ_G0016588.1 mouse_genomes_project 1 169723599 169790275 - MGP_LPJ_P0023011 Prrx1 protein_coding protein_coding MGP_LPJ_T0023012.1 MGP_LPJ_G0016588.1 mouse_genomes_project 1 169726033 169766455 - Prrx1 protein_coding processed_transcript MGP_LPJ_T0023013.1 MGP_LPJ_G0016588.1 mouse_genomes_project 1 169731304 169790271 - MGP_LPJ_P0023013 Prrx1 protein_coding protein_coding MGP_LPJ_T0023014.1 MGP_LPJ_G0016588.1 mouse_genomes_project 1 169760039 169790274 - Prrx1 protein_coding retained_intron MGP_LPJ_T0002975.1 MGP_LPJ_G0002794.1 mouse_genomes_project 1 179026342 179029105 - Gm37756 antisense antisense MGP_LPJ_T0021585.1 MGP_LPJ_G0016305.1 mouse_genomes_project 1 114537472 114626275 - MGP_LPJ_P0021585 Cdh19 protein_coding protein_coding MGP_LPJ_T0021586.1 MGP_LPJ_G0016305.1 mouse_genomes_project 1 114594390 114626498 - Cdh19 protein_coding processed_transcript MGP_LPJ_T0005869.1 MGP_LPJ_G0004924.1 mouse_genomes_project 1 98662207 98677774 - 4930598F16Rik lincRNA lincRNA MGP_LPJ_T0021880.1 MGP_LPJ_G0016368.1 mouse_genomes_project 1 135860501 135871247 - MGP_LPJ_P0021880 Dyrk3 protein_coding protein_coding MGP_LPJ_T0021881.1 MGP_LPJ_G0016368.1 mouse_genomes_project 1 135862921 135871152 - MGP_LPJ_P0021881 Dyrk3 protein_coding protein_coding MGP_LPJ_T0020893.1 MGP_LPJ_G0016147.1 mouse_genomes_project 1 87281463 87288313 + protein_coding processed_transcript MGP_LPJ_T0002875.1 MGP_LPJ_G0002717.1 mouse_genomes_project 1 90904141 90909584 - 4930453O03Rik antisense antisense MGP_LPJ_T0000655.1 MGP_LPJ_G0000590.1 mouse_genomes_project 1 134511692 134515519 + TEC TEC MGP_LPJ_T0098757.1 MGP_LPJ_G0037020.1 mouse_genomes_project 1 73797741 73797932 + Gm24497 snRNA snRNA MGP_LPJ_T0021367.1 MGP_LPJ_G0016255.1 mouse_genomes_project 1 96105574 96114209 - Pask protein_coding retained_intron MGP_LPJ_T0021368.1 MGP_LPJ_G0016255.1 mouse_genomes_project 1 96105582 96139458 - MGP_LPJ_P0021368 Pask protein_coding protein_coding MGP_LPJ_T0021369.1 MGP_LPJ_G0016255.1 mouse_genomes_project 1 96106642 96109954 - Pask protein_coding retained_intron MGP_LPJ_T0021370.1 MGP_LPJ_G0016255.1 mouse_genomes_project 1 96106889 96108149 - Pask protein_coding retained_intron MGP_LPJ_T0021371.1 MGP_LPJ_G0016255.1 mouse_genomes_project 1 96114623 96140134 - Pask protein_coding retained_intron MGP_LPJ_T0021372.1 MGP_LPJ_G0016255.1 mouse_genomes_project 1 96134102 96140151 - MGP_LPJ_P0021372 Pask protein_coding protein_coding MGP_LPJ_T0016987.1 MGP_LPJ_G0015030.1 mouse_genomes_project 1 144110670 144114738 + Gm37423 processed_transcript retained_intron MGP_LPJ_T0019563.1 MGP_LPJ_G0015902.1 mouse_genomes_project 1 43478378 43487920 + MGP_LPJ_P0019563 protein_coding protein_coding MGP_LPJ_T0019564.1 MGP_LPJ_G0015902.1 mouse_genomes_project 1 43478421 43487683 + protein_coding processed_transcript MGP_LPJ_T0019565.1 MGP_LPJ_G0015902.1 mouse_genomes_project 1 43478929 43487701 + protein_coding processed_transcript MGP_LPJ_T0019566.1 MGP_LPJ_G0015902.1 mouse_genomes_project 1 43479070 43506585 + MGP_LPJ_P0019566 protein_coding unknown_likely_coding MGP_LPJ_T0019567.1 MGP_LPJ_G0015902.1 mouse_genomes_project 1 43481332 43487761 + MGP_LPJ_P0019567 protein_coding protein_coding MGP_LPJ_T0020902.1 MGP_LPJ_G0016150.1 mouse_genomes_project 1 88027783 88050455 - A630001G21Rik protein_coding processed_transcript MGP_LPJ_T0020903.1 MGP_LPJ_G0016150.1 mouse_genomes_project 1 88027783 88094003 - MGP_LPJ_P0020903 A630001G21Rik protein_coding protein_coding MGP_LPJ_T0020904.1 MGP_LPJ_G0016150.1 mouse_genomes_project 1 88028389 88050503 - MGP_LPJ_P0020904 A630001G21Rik protein_coding protein_coding MGP_LPJ_T0020905.1 MGP_LPJ_G0016150.1 mouse_genomes_project 1 88028392 88050455 - MGP_LPJ_P0020905 A630001G21Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0020906.1 MGP_LPJ_G0016150.1 mouse_genomes_project 1 88028790 88050428 - A630001G21Rik protein_coding processed_transcript MGP_LPJ_T0020907.1 MGP_LPJ_G0016150.1 mouse_genomes_project 1 88038907 88050435 - A630001G21Rik protein_coding processed_transcript MGP_LPJ_T0021675.1 MGP_LPJ_G0016321.1 mouse_genomes_project 1 124198639 124207437 - MGP_LPJ_P0021675 Tmem37 protein_coding protein_coding MGP_LPJ_T0000594.1 MGP_LPJ_G0000529.1 mouse_genomes_project 1 91230260 91232001 + TEC TEC MGP_LPJ_T0011975.1 MGP_LPJ_G0010066.1 mouse_genomes_project 1 33728875 33731012 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021737.1 MGP_LPJ_G0016336.1 mouse_genomes_project 1 130322791 130374391 - MGP_LPJ_P0021737 Lypd1 protein_coding protein_coding MGP_LPJ_T0021738.1 MGP_LPJ_G0016336.1 mouse_genomes_project 1 130327450 130373564 - MGP_LPJ_P0021738 Lypd1 protein_coding protein_coding MGP_LPJ_T0021739.1 MGP_LPJ_G0016336.1 mouse_genomes_project 1 130327484 130375106 - MGP_LPJ_P0021739 Lypd1 protein_coding protein_coding MGP_LPJ_T0021740.1 MGP_LPJ_G0016336.1 mouse_genomes_project 1 130328267 130373093 - MGP_LPJ_P0021740 Lypd1 protein_coding protein_coding MGP_LPJ_T0021741.1 MGP_LPJ_G0016336.1 mouse_genomes_project 1 130328684 130375279 - MGP_LPJ_P0021741 Lypd1 protein_coding protein_coding MGP_LPJ_T0000637.1 MGP_LPJ_G0000572.1 mouse_genomes_project 1 127860450 127865163 - TEC TEC MGP_LPJ_T0098788.1 MGP_LPJ_G0037051.1 mouse_genomes_project 1 149993415 149993522 - Gm23672 snRNA snRNA MGP_LPJ_T0012320.1 MGP_LPJ_G0010411.1 mouse_genomes_project 1 173034798 173034969 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000838.1 MGP_LPJ_G0000768.1 mouse_genomes_project 1 202979530 202981368 + TEC TEC MGP_LPJ_T0023158.1 MGP_LPJ_G0016621.1 mouse_genomes_project 1 172859892 172923593 + MGP_LPJ_P0023158 Ildr2 protein_coding protein_coding MGP_LPJ_T0023159.1 MGP_LPJ_G0016621.1 mouse_genomes_project 1 172859946 172918040 + MGP_LPJ_P0023159 Ildr2 protein_coding protein_coding MGP_LPJ_T0023160.1 MGP_LPJ_G0016621.1 mouse_genomes_project 1 172859946 172918040 + MGP_LPJ_P0023160 Ildr2 protein_coding protein_coding MGP_LPJ_T0023161.1 MGP_LPJ_G0016621.1 mouse_genomes_project 1 172859946 172918040 + MGP_LPJ_P0023161 Ildr2 protein_coding protein_coding MGP_LPJ_T0023162.1 MGP_LPJ_G0016621.1 mouse_genomes_project 1 172859946 172918040 + MGP_LPJ_P0023162 Ildr2 protein_coding protein_coding MGP_LPJ_T0023163.1 MGP_LPJ_G0016621.1 mouse_genomes_project 1 172859946 172918040 + MGP_LPJ_P0023163 Ildr2 protein_coding protein_coding MGP_LPJ_T0023164.1 MGP_LPJ_G0016621.1 mouse_genomes_project 1 172859946 172918040 + MGP_LPJ_P0023164 Ildr2 protein_coding protein_coding MGP_LPJ_T0000609.1 MGP_LPJ_G0000544.1 mouse_genomes_project 1 100598017 100599202 - TEC TEC MGP_LPJ_T0006028.1 MGP_LPJ_G0005052.1 mouse_genomes_project 1 188983833 188986346 + A430110L20Rik lincRNA lincRNA MGP_LPJ_T0006029.1 MGP_LPJ_G0005052.1 mouse_genomes_project 1 188983923 188986338 + A430110L20Rik lincRNA lincRNA MGP_LPJ_T0101678.1 MGP_LPJ_G0039716.1 mouse_genomes_project 1 19238375 19242726 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0098767.1 MGP_LPJ_G0037030.1 mouse_genomes_project 1 101121066 101121173 + Gm24465 snRNA snRNA MGP_LPJ_T0019954.1 MGP_LPJ_G0015977.1 mouse_genomes_project 1 59931642 59949511 - MGP_LPJ_P0019954 Tmem237 protein_coding protein_coding MGP_LPJ_T0019955.1 MGP_LPJ_G0015977.1 mouse_genomes_project 1 59931649 59949223 - MGP_LPJ_P0019955 Tmem237 protein_coding protein_coding MGP_LPJ_T0019956.1 MGP_LPJ_G0015977.1 mouse_genomes_project 1 59931963 59949799 - MGP_LPJ_P0019956 Tmem237 protein_coding protein_coding MGP_LPJ_T0019957.1 MGP_LPJ_G0015977.1 mouse_genomes_project 1 59937914 59949529 - MGP_LPJ_P0019957 Tmem237 protein_coding protein_coding MGP_LPJ_T0019958.1 MGP_LPJ_G0015977.1 mouse_genomes_project 1 59938503 59943734 - Tmem237 protein_coding retained_intron MGP_LPJ_T0019959.1 MGP_LPJ_G0015977.1 mouse_genomes_project 1 59938809 59949825 - MGP_LPJ_P0019959 Tmem237 protein_coding protein_coding MGP_LPJ_T0019960.1 MGP_LPJ_G0015977.1 mouse_genomes_project 1 59939590 59945376 - Tmem237 protein_coding retained_intron MGP_LPJ_T0023700.1 MGP_LPJ_G0016768.1 mouse_genomes_project 1 185881081 185884287 + Cox20 protein_coding retained_intron MGP_LPJ_T0023701.1 MGP_LPJ_G0016768.1 mouse_genomes_project 1 185881081 185884645 + MGP_LPJ_P0023701 Cox20 protein_coding protein_coding MGP_LPJ_T0005668.1 MGP_LPJ_G0004771.1 mouse_genomes_project 1 4849699 4871626 + Gm30414 lincRNA lincRNA MGP_LPJ_T0006008.1 MGP_LPJ_G0005034.1 mouse_genomes_project 1 173918861 173919560 + Gm2453 lincRNA lincRNA MGP_LPJ_T0006009.1 MGP_LPJ_G0005034.1 mouse_genomes_project 1 173919277 173923650 + Gm2453 lincRNA lincRNA MGP_LPJ_T0000578.1 MGP_LPJ_G0000513.1 mouse_genomes_project 1 86761820 86766095 - TEC TEC MGP_LPJ_T0012007.1 MGP_LPJ_G0010098.1 mouse_genomes_project 1 45144477 45145658 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011270.1 MGP_LPJ_G0009388.1 mouse_genomes_project 1 107819538 107819868 + Gm23537 misc_RNA misc_RNA MGP_LPJ_T0019337.1 MGP_LPJ_G0015854.1 mouse_genomes_project 1 36589511 36603966 - MGP_LPJ_P0019337 2010300C02Rik protein_coding protein_coding MGP_LPJ_T0019338.1 MGP_LPJ_G0015854.1 mouse_genomes_project 1 36589511 36702636 - MGP_LPJ_P0019338 2010300C02Rik protein_coding protein_coding MGP_LPJ_T0019339.1 MGP_LPJ_G0015854.1 mouse_genomes_project 1 36617760 36702346 - MGP_LPJ_P0019339 2010300C02Rik protein_coding protein_coding MGP_LPJ_T0011927.1 MGP_LPJ_G0010018.1 mouse_genomes_project 1 19286269 19318287 + processed_pseudogene processed_pseudogene MGP_LPJ_T0022307.1 MGP_LPJ_G0016458.1 mouse_genomes_project 1 141296217 141297294 - MGP_LPJ_P0022307 Gpr25 protein_coding protein_coding MGP_LPJ_T0006060.1 MGP_LPJ_G0005073.1 mouse_genomes_project 1 193335342 193343867 - Gm2061 lincRNA lincRNA MGP_LPJ_T0023007.1 MGP_LPJ_G0016586.1 mouse_genomes_project 1 169420046 169453360 - MGP_LPJ_P0023007 Fmo3 protein_coding protein_coding MGP_LPJ_T0023008.1 MGP_LPJ_G0016586.1 mouse_genomes_project 1 169429774 169453361 - Fmo3 protein_coding retained_intron MGP_LPJ_T0000414.1 MGP_LPJ_G0000352.1 mouse_genomes_project 1 10734973 10738122 - TEC TEC MGP_LPJ_T0005707.1 MGP_LPJ_G0004803.1 mouse_genomes_project 1 34881404 34882227 + 4930535G08Rik lincRNA lincRNA MGP_LPJ_T0022140.1 MGP_LPJ_G0016425.1 mouse_genomes_project 1 139342586 139344981 + Cyb5r1 protein_coding processed_transcript MGP_LPJ_T0022141.1 MGP_LPJ_G0016425.1 mouse_genomes_project 1 139342771 139348731 + MGP_LPJ_P0022141 Cyb5r1 protein_coding protein_coding MGP_LPJ_T0022142.1 MGP_LPJ_G0016425.1 mouse_genomes_project 1 139342771 139348727 + MGP_LPJ_P0022142 Cyb5r1 protein_coding nonsense_mediated_decay MGP_LPJ_T0022143.1 MGP_LPJ_G0016425.1 mouse_genomes_project 1 139342985 139344593 + Cyb5r1 protein_coding processed_transcript MGP_LPJ_T0022144.1 MGP_LPJ_G0016425.1 mouse_genomes_project 1 139342993 139344585 + Cyb5r1 protein_coding processed_transcript MGP_LPJ_T0022145.1 MGP_LPJ_G0016425.1 mouse_genomes_project 1 139342994 139346656 + MGP_LPJ_P0022145 Cyb5r1 protein_coding protein_coding MGP_LPJ_T0022146.1 MGP_LPJ_G0016425.1 mouse_genomes_project 1 139343010 139345857 + Cyb5r1 protein_coding retained_intron MGP_LPJ_T0022147.1 MGP_LPJ_G0016425.1 mouse_genomes_project 1 139343018 139346990 + Cyb5r1 protein_coding retained_intron MGP_LPJ_T0022148.1 MGP_LPJ_G0016425.1 mouse_genomes_project 1 139343303 139347960 + MGP_LPJ_P0022148 Cyb5r1 protein_coding nonsense_mediated_decay MGP_LPJ_T0022149.1 MGP_LPJ_G0016425.1 mouse_genomes_project 1 139343303 139344658 + MGP_LPJ_P0022149 Cyb5r1 protein_coding nonsense_mediated_decay MGP_LPJ_T0012349.1 MGP_LPJ_G0010440.1 mouse_genomes_project 1 189039216 189041304 + processed_pseudogene processed_pseudogene MGP_LPJ_T0020347.1 MGP_LPJ_G0016051.1 mouse_genomes_project 1 74418976 74451890 + MGP_LPJ_P0020347 Igfbp2 protein_coding protein_coding MGP_LPJ_T0020348.1 MGP_LPJ_G0016051.1 mouse_genomes_project 1 74448094 74451544 + Igfbp2 protein_coding retained_intron MGP_LPJ_T0019411.1 MGP_LPJ_G0015868.1 mouse_genomes_project 1 38044200 38055550 + MGP_LPJ_P0019411 Pdcl3 protein_coding protein_coding MGP_LPJ_T0019412.1 MGP_LPJ_G0015868.1 mouse_genomes_project 1 38046428 38053230 + MGP_LPJ_P0019412 Pdcl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0019413.1 MGP_LPJ_G0015868.1 mouse_genomes_project 1 38046452 38054120 + MGP_LPJ_P0019413 Pdcl3 protein_coding protein_coding MGP_LPJ_T0019414.1 MGP_LPJ_G0015868.1 mouse_genomes_project 1 38053472 38054958 + Pdcl3 protein_coding retained_intron MGP_LPJ_T0023971.1 MGP_LPJ_G0016822.1 mouse_genomes_project 1 191810931 191838969 + MGP_LPJ_P0023971 Dusp10 protein_coding protein_coding MGP_LPJ_T0023974.1 MGP_LPJ_G0016822.1 mouse_genomes_project 1 191834625 191884419 + MGP_LPJ_P0023974 Dusp10 protein_coding protein_coding MGP_LPJ_T0005798.1 MGP_LPJ_G0004866.1 mouse_genomes_project 1 73416382 73440902 - Gm28818 lincRNA lincRNA MGP_LPJ_T0005799.1 MGP_LPJ_G0004866.1 mouse_genomes_project 1 73419072 73421265 - Gm28818 lincRNA lincRNA MGP_LPJ_T0021449.1 MGP_LPJ_G0016270.1 mouse_genomes_project 1 96753626 96809998 + MGP_LPJ_P0021449 protein_coding protein_coding MGP_LPJ_T0005688.1 MGP_LPJ_G0004787.1 mouse_genomes_project 1 21589599 21615568 + Gm28822 lincRNA lincRNA MGP_LPJ_T0006073.1 MGP_LPJ_G0005084.1 mouse_genomes_project 1 199179145 199181131 + Gm31373 lincRNA lincRNA MGP_LPJ_T0019460.1 MGP_LPJ_G0015879.1 mouse_genomes_project 1 39345032 39437756 + MGP_LPJ_P0019460 Il1r1 protein_coding protein_coding MGP_LPJ_T0019461.1 MGP_LPJ_G0015879.1 mouse_genomes_project 1 39387412 39397976 + Il1r1 protein_coding processed_transcript MGP_LPJ_T0019462.1 MGP_LPJ_G0015879.1 mouse_genomes_project 1 39401646 39433892 + MGP_LPJ_P0019462 Il1r1 protein_coding unknown_likely_coding MGP_LPJ_T0021462.1 MGP_LPJ_G0016277.1 mouse_genomes_project 1 100661343 100723061 - MGP_LPJ_P0021462 D1Ertd622e protein_coding protein_coding MGP_LPJ_T0021463.1 MGP_LPJ_G0016277.1 mouse_genomes_project 1 100702405 100723061 - MGP_LPJ_P0021463 D1Ertd622e protein_coding protein_coding MGP_LPJ_T0021464.1 MGP_LPJ_G0016277.1 mouse_genomes_project 1 100702405 100722663 - MGP_LPJ_P0021464 D1Ertd622e protein_coding protein_coding MGP_LPJ_T0021465.1 MGP_LPJ_G0016277.1 mouse_genomes_project 1 100707014 100722663 - MGP_LPJ_P0021465 D1Ertd622e protein_coding protein_coding MGP_LPJ_T0101218.1 MGP_LPJ_G0039480.1 mouse_genomes_project 1 35694239 35694549 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101219.1 MGP_LPJ_G0039480.1 mouse_genomes_project 1 35694394 35695251 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0000407.1 MGP_LPJ_G0000345.1 mouse_genomes_project 1 7680340 7682062 - TEC TEC MGP_LPJ_T0009571.1 MGP_LPJ_G0007689.1 mouse_genomes_project 1 184218554 184218634 + Gm25993 miRNA miRNA MGP_LPJ_T0000718.1 MGP_LPJ_G0000651.1 mouse_genomes_project 1 158837292 158837730 + TEC TEC MGP_LPJ_T0019181.1 MGP_LPJ_G0015829.1 mouse_genomes_project 1 33587885 33630718 - MGP_LPJ_P0019181 Fam168b protein_coding protein_coding MGP_LPJ_T0019182.1 MGP_LPJ_G0015829.1 mouse_genomes_project 1 33587892 33630733 - MGP_LPJ_P0019182 Fam168b protein_coding protein_coding MGP_LPJ_T0019183.1 MGP_LPJ_G0015829.1 mouse_genomes_project 1 33591893 33630632 - MGP_LPJ_P0019183 Fam168b protein_coding protein_coding MGP_LPJ_T0019184.1 MGP_LPJ_G0015829.1 mouse_genomes_project 1 33592010 33630653 - MGP_LPJ_P0019184 Fam168b protein_coding nonsense_mediated_decay MGP_LPJ_T0019185.1 MGP_LPJ_G0015829.1 mouse_genomes_project 1 33592662 33630702 - MGP_LPJ_P0019185 Fam168b protein_coding protein_coding MGP_LPJ_T0019186.1 MGP_LPJ_G0015829.1 mouse_genomes_project 1 33594265 33630681 - Fam168b protein_coding processed_transcript MGP_LPJ_T0019187.1 MGP_LPJ_G0015829.1 mouse_genomes_project 1 33594352 33630672 - MGP_LPJ_P0019187 Fam168b protein_coding protein_coding MGP_LPJ_T0019188.1 MGP_LPJ_G0015829.1 mouse_genomes_project 1 33603344 33630733 - Fam168b protein_coding retained_intron MGP_LPJ_T0023098.1 MGP_LPJ_G0016612.1 mouse_genomes_project 1 172028967 172125854 + MGP_LPJ_P0023098 Adcy10 protein_coding nonsense_mediated_decay MGP_LPJ_T0023099.1 MGP_LPJ_G0016612.1 mouse_genomes_project 1 172028967 172125249 + MGP_LPJ_P0023099 Adcy10 protein_coding protein_coding MGP_LPJ_T0023100.1 MGP_LPJ_G0016612.1 mouse_genomes_project 1 172028967 172126224 + MGP_LPJ_P0023100 Adcy10 protein_coding protein_coding MGP_LPJ_T0023101.1 MGP_LPJ_G0016612.1 mouse_genomes_project 1 172028973 172125248 + MGP_LPJ_P0023101 Adcy10 protein_coding protein_coding MGP_LPJ_T0023102.1 MGP_LPJ_G0016612.1 mouse_genomes_project 1 172028977 172033311 + Adcy10 protein_coding processed_transcript MGP_LPJ_T0023103.1 MGP_LPJ_G0016612.1 mouse_genomes_project 1 172028995 172125246 + MGP_LPJ_P0023103 Adcy10 protein_coding nonsense_mediated_decay MGP_LPJ_T0023104.1 MGP_LPJ_G0016612.1 mouse_genomes_project 1 172047704 172116102 + MGP_LPJ_P0023104 Adcy10 protein_coding protein_coding MGP_LPJ_T0023105.1 MGP_LPJ_G0016612.1 mouse_genomes_project 1 172056346 172086880 + Adcy10 protein_coding retained_intron MGP_LPJ_T0023106.1 MGP_LPJ_G0016612.1 mouse_genomes_project 1 172065118 172066930 + Adcy10 protein_coding retained_intron MGP_LPJ_T0023107.1 MGP_LPJ_G0016612.1 mouse_genomes_project 1 172086703 172095636 + Adcy10 protein_coding processed_transcript MGP_LPJ_T0012154.1 MGP_LPJ_G0010245.1 mouse_genomes_project 1 103173276 103173840 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012081.1 MGP_LPJ_G0010172.1 mouse_genomes_project 1 66556029 66556351 - processed_pseudogene processed_pseudogene MGP_LPJ_T0022392.1 MGP_LPJ_G0016476.1 mouse_genomes_project 1 145067855 145117990 - MGP_LPJ_P0022392 Cfhr2 protein_coding protein_coding MGP_LPJ_T0000408.1 MGP_LPJ_G0000346.1 mouse_genomes_project 1 7941338 7944083 - TEC TEC MGP_LPJ_T0018911.1 MGP_LPJ_G0015770.1 mouse_genomes_project 1 13913269 14228472 - MGP_LPJ_P0018911 Stau2 protein_coding protein_coding MGP_LPJ_T0018912.1 MGP_LPJ_G0015770.1 mouse_genomes_project 1 13913396 14228394 - MGP_LPJ_P0018912 Stau2 protein_coding protein_coding MGP_LPJ_T0018913.1 MGP_LPJ_G0015770.1 mouse_genomes_project 1 13913399 14228394 - MGP_LPJ_P0018913 Stau2 protein_coding protein_coding MGP_LPJ_T0018914.1 MGP_LPJ_G0015770.1 mouse_genomes_project 1 13913405 14228472 - MGP_LPJ_P0018914 Stau2 protein_coding protein_coding MGP_LPJ_T0018915.1 MGP_LPJ_G0015770.1 mouse_genomes_project 1 13913411 14229172 - MGP_LPJ_P0018915 Stau2 protein_coding protein_coding MGP_LPJ_T0018916.1 MGP_LPJ_G0015770.1 mouse_genomes_project 1 14037435 14228360 - MGP_LPJ_P0018916 Stau2 protein_coding protein_coding MGP_LPJ_T0018917.1 MGP_LPJ_G0015770.1 mouse_genomes_project 1 14038224 14069470 - Stau2 protein_coding processed_transcript MGP_LPJ_T0018918.1 MGP_LPJ_G0015770.1 mouse_genomes_project 1 14038317 14228406 - MGP_LPJ_P0018918 Stau2 protein_coding protein_coding MGP_LPJ_T0018919.1 MGP_LPJ_G0015770.1 mouse_genomes_project 1 14038325 14228419 - MGP_LPJ_P0018919 Stau2 protein_coding nonsense_mediated_decay MGP_LPJ_T0018920.1 MGP_LPJ_G0015770.1 mouse_genomes_project 1 14039724 14193167 - MGP_LPJ_P0018920 Stau2 protein_coding protein_coding MGP_LPJ_T0018921.1 MGP_LPJ_G0015770.1 mouse_genomes_project 1 14090375 14228436 - MGP_LPJ_P0018921 Stau2 protein_coding protein_coding MGP_LPJ_T0018922.1 MGP_LPJ_G0015770.1 mouse_genomes_project 1 14142170 14229140 - MGP_LPJ_P0018922 Stau2 protein_coding protein_coding MGP_LPJ_T0018923.1 MGP_LPJ_G0015770.1 mouse_genomes_project 1 14161924 14228426 - MGP_LPJ_P0018923 Stau2 protein_coding protein_coding MGP_LPJ_T0018924.1 MGP_LPJ_G0015770.1 mouse_genomes_project 1 14162313 14229081 - MGP_LPJ_P0018924 Stau2 protein_coding protein_coding MGP_LPJ_T0018925.1 MGP_LPJ_G0015770.1 mouse_genomes_project 1 14162422 14229080 - MGP_LPJ_P0018925 Stau2 protein_coding protein_coding MGP_LPJ_T0005994.1 MGP_LPJ_G0005023.1 mouse_genomes_project 1 171234118 171259254 + Gm37184 lincRNA lincRNA MGP_LPJ_T0000487.1 MGP_LPJ_G0000422.1 mouse_genomes_project 1 36676911 36679129 - TEC TEC MGP_LPJ_T0012179.1 MGP_LPJ_G0010270.1 mouse_genomes_project 1 111941020 111942293 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000599.1 MGP_LPJ_G0000534.1 mouse_genomes_project 1 93519719 93521580 - TEC TEC MGP_LPJ_T0021812.1 MGP_LPJ_G0016348.1 mouse_genomes_project 1 132920077 132950519 - MGP_LPJ_P0021812 Mcm6 protein_coding protein_coding MGP_LPJ_T0021813.1 MGP_LPJ_G0016348.1 mouse_genomes_project 1 132920080 132950502 - MGP_LPJ_P0021813 Mcm6 protein_coding protein_coding MGP_LPJ_T0021814.1 MGP_LPJ_G0016348.1 mouse_genomes_project 1 132928767 132936922 - Mcm6 protein_coding retained_intron MGP_LPJ_T0021815.1 MGP_LPJ_G0016348.1 mouse_genomes_project 1 132930546 132934310 - Mcm6 protein_coding retained_intron MGP_LPJ_T0101466.1 MGP_LPJ_G0039619.1 mouse_genomes_project 1 59438160 59441079 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101467.1 MGP_LPJ_G0039619.1 mouse_genomes_project 1 59440186 59440316 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0000701.1 MGP_LPJ_G0000634.1 mouse_genomes_project 1 146780376 146783463 - TEC TEC MGP_LPJ_T0005845.1 MGP_LPJ_G0004902.1 mouse_genomes_project 1 91338718 91339565 + Platr5 lincRNA lincRNA MGP_LPJ_T0005846.1 MGP_LPJ_G0004902.1 mouse_genomes_project 1 91338782 91339538 + Platr5 lincRNA lincRNA MGP_LPJ_T0023710.1 MGP_LPJ_G0016771.1 mouse_genomes_project 1 185981730 186066729 + MGP_LPJ_P0023710 Efcab2 protein_coding protein_coding MGP_LPJ_T0023711.1 MGP_LPJ_G0016771.1 mouse_genomes_project 1 185981797 186018414 + Efcab2 protein_coding processed_transcript MGP_LPJ_T0023712.1 MGP_LPJ_G0016771.1 mouse_genomes_project 1 186029688 186063636 + Efcab2 protein_coding processed_transcript MGP_LPJ_T0003019.1 MGP_LPJ_G0002828.1 mouse_genomes_project 1 200246834 200251409 - Gm26670 antisense antisense MGP_LPJ_T0021742.1 MGP_LPJ_G0016337.1 mouse_genomes_project 1 130375814 131337595 - MGP_LPJ_P0021742 Nckap5 protein_coding protein_coding MGP_LPJ_T0021743.1 MGP_LPJ_G0016337.1 mouse_genomes_project 1 130375814 131337595 - MGP_LPJ_P0021743 Nckap5 protein_coding protein_coding MGP_LPJ_T0021744.1 MGP_LPJ_G0016337.1 mouse_genomes_project 1 130375825 130989732 - MGP_LPJ_P0021744 Nckap5 protein_coding protein_coding MGP_LPJ_T0021745.1 MGP_LPJ_G0016337.1 mouse_genomes_project 1 130376497 130430384 - Nckap5 protein_coding processed_transcript MGP_LPJ_T0021746.1 MGP_LPJ_G0016337.1 mouse_genomes_project 1 130376919 130945308 - MGP_LPJ_P0021746 Nckap5 protein_coding protein_coding MGP_LPJ_T0021747.1 MGP_LPJ_G0016337.1 mouse_genomes_project 1 130376919 130942220 - MGP_LPJ_P0021747 Nckap5 protein_coding protein_coding MGP_LPJ_T0021748.1 MGP_LPJ_G0016337.1 mouse_genomes_project 1 130377136 130487744 - MGP_LPJ_P0021748 Nckap5 protein_coding protein_coding MGP_LPJ_T0021749.1 MGP_LPJ_G0016337.1 mouse_genomes_project 1 130492507 130501061 - Nckap5 protein_coding processed_transcript MGP_LPJ_T0021750.1 MGP_LPJ_G0016337.1 mouse_genomes_project 1 130709004 131337762 - MGP_LPJ_P0021750 Nckap5 protein_coding protein_coding MGP_LPJ_T0021751.1 MGP_LPJ_G0016337.1 mouse_genomes_project 1 130747811 131236766 - MGP_LPJ_P0021751 Nckap5 protein_coding protein_coding MGP_LPJ_T0021752.1 MGP_LPJ_G0016337.1 mouse_genomes_project 1 131024991 131236754 - Nckap5 protein_coding retained_intron MGP_LPJ_T0021753.1 MGP_LPJ_G0016337.1 mouse_genomes_project 1 131027533 131337444 - Nckap5 protein_coding retained_intron MGP_LPJ_T0021658.1 MGP_LPJ_G0016317.1 mouse_genomes_project 1 123747945 123945413 - MGP_LPJ_P0021658 Ptpn4 protein_coding protein_coding MGP_LPJ_T0021659.1 MGP_LPJ_G0016317.1 mouse_genomes_project 1 123753522 123783591 - MGP_LPJ_P0021659 Ptpn4 protein_coding nonsense_mediated_decay MGP_LPJ_T0021660.1 MGP_LPJ_G0016317.1 mouse_genomes_project 1 123785612 123945147 - MGP_LPJ_P0021660 Ptpn4 protein_coding protein_coding MGP_LPJ_T0021661.1 MGP_LPJ_G0016317.1 mouse_genomes_project 1 123788635 123843430 - MGP_LPJ_P0021661 Ptpn4 protein_coding nonsense_mediated_decay MGP_LPJ_T0021662.1 MGP_LPJ_G0016317.1 mouse_genomes_project 1 123802863 123816347 - Ptpn4 protein_coding retained_intron MGP_LPJ_T0021663.1 MGP_LPJ_G0016317.1 mouse_genomes_project 1 123826667 123887177 - MGP_LPJ_P0021663 Ptpn4 protein_coding nonsense_mediated_decay MGP_LPJ_T0021664.1 MGP_LPJ_G0016317.1 mouse_genomes_project 1 123845398 123907983 - MGP_LPJ_P0021664 Ptpn4 protein_coding protein_coding MGP_LPJ_T0021665.1 MGP_LPJ_G0016317.1 mouse_genomes_project 1 123868377 123944871 - MGP_LPJ_P0021665 Ptpn4 protein_coding nonsense_mediated_decay MGP_LPJ_T0021666.1 MGP_LPJ_G0016317.1 mouse_genomes_project 1 123868717 123944871 - MGP_LPJ_P0021666 Ptpn4 protein_coding protein_coding MGP_LPJ_T0021667.1 MGP_LPJ_G0016317.1 mouse_genomes_project 1 123876694 123908003 - MGP_LPJ_P0021667 Ptpn4 protein_coding protein_coding MGP_LPJ_T0021668.1 MGP_LPJ_G0016317.1 mouse_genomes_project 1 123876754 123944799 - MGP_LPJ_P0021668 Ptpn4 protein_coding protein_coding MGP_LPJ_T0019195.1 MGP_LPJ_G0015832.1 mouse_genomes_project 1 35015328 35125814 - MGP_LPJ_P0019195 Uggt1 protein_coding protein_coding MGP_LPJ_T0019196.1 MGP_LPJ_G0015832.1 mouse_genomes_project 1 35018783 35041160 - Uggt1 protein_coding retained_intron MGP_LPJ_T0019197.1 MGP_LPJ_G0015832.1 mouse_genomes_project 1 35018787 35125670 - MGP_LPJ_P0019197 Uggt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0019198.1 MGP_LPJ_G0015832.1 mouse_genomes_project 1 35021458 35025826 - Uggt1 protein_coding retained_intron MGP_LPJ_T0019199.1 MGP_LPJ_G0015832.1 mouse_genomes_project 1 35037095 35050825 - MGP_LPJ_P0019199 Uggt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0019200.1 MGP_LPJ_G0015832.1 mouse_genomes_project 1 35037574 35062164 - MGP_LPJ_P0019200 Uggt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0019201.1 MGP_LPJ_G0015832.1 mouse_genomes_project 1 35038727 35040308 - Uggt1 protein_coding retained_intron MGP_LPJ_T0019202.1 MGP_LPJ_G0015832.1 mouse_genomes_project 1 35058184 35125616 - Uggt1 protein_coding retained_intron MGP_LPJ_T0019203.1 MGP_LPJ_G0015832.1 mouse_genomes_project 1 35065416 35090452 - MGP_LPJ_P0019203 Uggt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0019204.1 MGP_LPJ_G0015832.1 mouse_genomes_project 1 35075504 35088626 - Uggt1 protein_coding retained_intron MGP_LPJ_T0019205.1 MGP_LPJ_G0015832.1 mouse_genomes_project 1 35125147 35126229 - Uggt1 protein_coding retained_intron MGP_LPJ_T0022211.1 MGP_LPJ_G0016440.1 mouse_genomes_project 1 140294892 140302911 - Timm17a protein_coding retained_intron MGP_LPJ_T0022212.1 MGP_LPJ_G0016440.1 mouse_genomes_project 1 140294994 140310797 - MGP_LPJ_P0022212 Timm17a protein_coding protein_coding MGP_LPJ_T0022213.1 MGP_LPJ_G0016440.1 mouse_genomes_project 1 140302206 140306672 - MGP_LPJ_P0022213 Timm17a protein_coding protein_coding MGP_LPJ_T0000462.1 MGP_LPJ_G0000398.1 mouse_genomes_project 1 29352431 29355467 - TEC TEC MGP_LPJ_T0022198.1 MGP_LPJ_G0016437.1 mouse_genomes_project 1 140143590 140151013 - MGP_LPJ_P0022198 Gpr37l1 protein_coding protein_coding MGP_LPJ_T0098466.1 MGP_LPJ_G0036746.1 mouse_genomes_project 1 191266772 191268308 + Gm37214 sense_intronic sense_intronic MGP_LPJ_T0000782.1 MGP_LPJ_G0000715.1 mouse_genomes_project 1 183696060 183702652 - TEC TEC MGP_LPJ_T0021515.1 MGP_LPJ_G0016286.1 mouse_genomes_project 1 109047782 109072853 + 2310035C23Rik protein_coding processed_transcript MGP_LPJ_T0021516.1 MGP_LPJ_G0016286.1 mouse_genomes_project 1 109047782 109141497 + MGP_LPJ_P0021516 2310035C23Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0021517.1 MGP_LPJ_G0016286.1 mouse_genomes_project 1 109047804 109141500 + MGP_LPJ_P0021517 2310035C23Rik protein_coding protein_coding MGP_LPJ_T0021518.1 MGP_LPJ_G0016286.1 mouse_genomes_project 1 109047834 109142616 + MGP_LPJ_P0021518 2310035C23Rik protein_coding protein_coding MGP_LPJ_T0021519.1 MGP_LPJ_G0016286.1 mouse_genomes_project 1 109047844 109141136 + MGP_LPJ_P0021519 2310035C23Rik protein_coding protein_coding MGP_LPJ_T0021520.1 MGP_LPJ_G0016286.1 mouse_genomes_project 1 109047858 109049072 + 2310035C23Rik protein_coding processed_transcript MGP_LPJ_T0021521.1 MGP_LPJ_G0016286.1 mouse_genomes_project 1 109048362 109125922 + 2310035C23Rik protein_coding retained_intron MGP_LPJ_T0021522.1 MGP_LPJ_G0016286.1 mouse_genomes_project 1 109082295 109142611 + MGP_LPJ_P0021522 2310035C23Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0021523.1 MGP_LPJ_G0016286.1 mouse_genomes_project 1 109089460 109102051 + 2310035C23Rik protein_coding retained_intron MGP_LPJ_T0021524.1 MGP_LPJ_G0016286.1 mouse_genomes_project 1 109117676 109122026 + 2310035C23Rik protein_coding retained_intron MGP_LPJ_T0021525.1 MGP_LPJ_G0016286.1 mouse_genomes_project 1 109127636 109140950 + 2310035C23Rik protein_coding retained_intron MGP_LPJ_T0021526.1 MGP_LPJ_G0016286.1 mouse_genomes_project 1 109128404 109138414 + 2310035C23Rik protein_coding retained_intron MGP_LPJ_T0098760.1 MGP_LPJ_G0037023.1 mouse_genomes_project 1 79730506 79730670 - Gm26263 snRNA snRNA MGP_LPJ_T0011803.1 MGP_LPJ_G0009921.1 mouse_genomes_project 1 111054606 111075623 + MGP_LPJ_P0011803 polymorphic_pseudogene protein_coding MGP_LPJ_T0011804.1 MGP_LPJ_G0009921.1 mouse_genomes_project 1 111054630 111077672 + polymorphic_pseudogene processed_transcript MGP_LPJ_T0011805.1 MGP_LPJ_G0009921.1 mouse_genomes_project 1 111060085 111075473 + MGP_LPJ_P0011805 polymorphic_pseudogene polymorphic_pseudogene MGP_LPJ_T0023598.1 MGP_LPJ_G0016741.1 mouse_genomes_project 1 181265549 181266473 - MGP_LPJ_P0023598 Olfr231 protein_coding protein_coding MGP_LPJ_T0012087.1 MGP_LPJ_G0010178.1 mouse_genomes_project 1 67227492 67227904 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021181.1 MGP_LPJ_G0016214.1 mouse_genomes_project 1 93648574 93649494 + MGP_LPJ_P0021181 Prlh protein_coding protein_coding MGP_LPJ_T0019987.1 MGP_LPJ_G0015983.1 mouse_genomes_project 1 60454556 60543402 - Sumo1 protein_coding processed_transcript MGP_LPJ_T0019992.1 MGP_LPJ_G0015983.1 mouse_genomes_project 1 60509133 60543444 - MGP_LPJ_P0019992 Sumo1 protein_coding protein_coding MGP_LPJ_T0019993.1 MGP_LPJ_G0015983.1 mouse_genomes_project 1 60509654 60543349 - MGP_LPJ_P0019993 Sumo1 protein_coding protein_coding MGP_LPJ_T0019994.1 MGP_LPJ_G0015983.1 mouse_genomes_project 1 60514915 60543444 - Sumo1 protein_coding retained_intron MGP_LPJ_T0012094.1 MGP_LPJ_G0010185.1 mouse_genomes_project 1 72525065 72525444 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012052.1 MGP_LPJ_G0010143.1 mouse_genomes_project 1 59983817 59985200 + processed_pseudogene processed_pseudogene MGP_LPJ_T0018652.1 MGP_LPJ_G0015725.1 mouse_genomes_project 1 1499811 1624554 - MGP_LPJ_P0018652 Rp1 protein_coding protein_coding MGP_LPJ_T0018653.1 MGP_LPJ_G0015725.1 mouse_genomes_project 1 1556623 1572792 - MGP_LPJ_P0018653 Rp1 protein_coding protein_coding MGP_LPJ_T0020448.1 MGP_LPJ_G0016070.1 mouse_genomes_project 1 76279917 76304193 - MGP_LPJ_P0020448 Zfp142 protein_coding protein_coding MGP_LPJ_T0020449.1 MGP_LPJ_G0016070.1 mouse_genomes_project 1 76281216 76304190 - MGP_LPJ_P0020449 Zfp142 protein_coding protein_coding MGP_LPJ_T0020450.1 MGP_LPJ_G0016070.1 mouse_genomes_project 1 76281292 76304310 - MGP_LPJ_P0020450 Zfp142 protein_coding protein_coding MGP_LPJ_T0020451.1 MGP_LPJ_G0016070.1 mouse_genomes_project 1 76281473 76304411 - MGP_LPJ_P0020451 Zfp142 protein_coding nonsense_mediated_decay MGP_LPJ_T0020452.1 MGP_LPJ_G0016070.1 mouse_genomes_project 1 76281659 76301830 - MGP_LPJ_P0020452 Zfp142 protein_coding nonsense_mediated_decay MGP_LPJ_T0020453.1 MGP_LPJ_G0016070.1 mouse_genomes_project 1 76298391 76304360 - Zfp142 protein_coding retained_intron MGP_LPJ_T0020454.1 MGP_LPJ_G0016070.1 mouse_genomes_project 1 76298398 76304117 - Zfp142 protein_coding retained_intron MGP_LPJ_T0020455.1 MGP_LPJ_G0016070.1 mouse_genomes_project 1 76301751 76304298 - Zfp142 protein_coding processed_transcript MGP_LPJ_T0012276.1 MGP_LPJ_G0010367.1 mouse_genomes_project 1 154533334 154533559 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009566.1 MGP_LPJ_G0007684.1 mouse_genomes_project 1 175198081 175198201 + Mir6348 miRNA miRNA MGP_LPJ_T0000800.1 MGP_LPJ_G0000732.1 mouse_genomes_project 1 188065658 188068729 + TEC TEC MGP_LPJ_T0021405.1 MGP_LPJ_G0016261.1 mouse_genomes_project 1 96433252 96450134 - MGP_LPJ_P0021405 Stk25 protein_coding protein_coding MGP_LPJ_T0021406.1 MGP_LPJ_G0016261.1 mouse_genomes_project 1 96435401 96450041 - Stk25 protein_coding retained_intron MGP_LPJ_T0021407.1 MGP_LPJ_G0016261.1 mouse_genomes_project 1 96435849 96438852 - Stk25 protein_coding retained_intron MGP_LPJ_T0021408.1 MGP_LPJ_G0016261.1 mouse_genomes_project 1 96436886 96439279 - Stk25 protein_coding retained_intron MGP_LPJ_T0021409.1 MGP_LPJ_G0016261.1 mouse_genomes_project 1 96439340 96449891 - MGP_LPJ_P0021409 Stk25 protein_coding protein_coding MGP_LPJ_T0021410.1 MGP_LPJ_G0016261.1 mouse_genomes_project 1 96440474 96450099 - MGP_LPJ_P0021410 Stk25 protein_coding protein_coding MGP_LPJ_T0018662.1 MGP_LPJ_G0015727.1 mouse_genomes_project 1 1987139 2001340 - MGP_LPJ_P0018662 Mrpl15 protein_coding protein_coding MGP_LPJ_T0018663.1 MGP_LPJ_G0015727.1 mouse_genomes_project 1 1987144 2001369 - MGP_LPJ_P0018663 Mrpl15 protein_coding protein_coding MGP_LPJ_T0018664.1 MGP_LPJ_G0015727.1 mouse_genomes_project 1 1988369 2001328 - MGP_LPJ_P0018664 Mrpl15 protein_coding nonsense_mediated_decay MGP_LPJ_T0018665.1 MGP_LPJ_G0015727.1 mouse_genomes_project 1 1990310 2001369 - Mrpl15 protein_coding processed_transcript MGP_LPJ_T0018666.1 MGP_LPJ_G0015727.1 mouse_genomes_project 1 1995583 2000098 - Mrpl15 protein_coding retained_intron MGP_LPJ_T0018667.1 MGP_LPJ_G0015727.1 mouse_genomes_project 1 1996837 2001369 - MGP_LPJ_P0018667 Mrpl15 protein_coding protein_coding MGP_LPJ_T0018668.1 MGP_LPJ_G0015727.1 mouse_genomes_project 1 1999103 2001322 - Mrpl15 protein_coding retained_intron MGP_LPJ_T0012362.1 MGP_LPJ_G0010453.1 mouse_genomes_project 1 197351883 197352264 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005771.1 MGP_LPJ_G0004845.1 mouse_genomes_project 1 62233243 62239467 - Gm28083 lincRNA lincRNA MGP_LPJ_T0000554.1 MGP_LPJ_G0000489.1 mouse_genomes_project 1 76208820 76212079 - TEC TEC MGP_LPJ_T0002895.1 MGP_LPJ_G0002732.1 mouse_genomes_project 1 122498041 122498657 - 2900060B14Rik antisense antisense MGP_LPJ_T0002896.1 MGP_LPJ_G0002732.1 mouse_genomes_project 1 122498059 122498137 - 2900060B14Rik antisense antisense MGP_LPJ_T0021772.1 MGP_LPJ_G0016342.1 mouse_genomes_project 1 132388278 132414065 - MGP_LPJ_P0021772 Map3k19 protein_coding protein_coding MGP_LPJ_T0021773.1 MGP_LPJ_G0016342.1 mouse_genomes_project 1 132388287 132414065 - MGP_LPJ_P0021773 Map3k19 protein_coding protein_coding MGP_LPJ_T0021774.1 MGP_LPJ_G0016342.1 mouse_genomes_project 1 132388287 132414065 - MGP_LPJ_P0021774 Map3k19 protein_coding protein_coding MGP_LPJ_T0021775.1 MGP_LPJ_G0016342.1 mouse_genomes_project 1 132388296 132425105 - MGP_LPJ_P0021775 Map3k19 protein_coding unknown_likely_coding MGP_LPJ_T0021776.1 MGP_LPJ_G0016342.1 mouse_genomes_project 1 132388296 132414065 - MGP_LPJ_P0021776 Map3k19 protein_coding protein_coding MGP_LPJ_T0023432.1 MGP_LPJ_G0016685.1 mouse_genomes_project 1 178588883 178614239 + MGP_LPJ_P0023432 Cd48 protein_coding protein_coding MGP_LPJ_T0023433.1 MGP_LPJ_G0016685.1 mouse_genomes_project 1 178588884 178614237 + MGP_LPJ_P0023433 Cd48 protein_coding protein_coding MGP_LPJ_T0005988.1 MGP_LPJ_G0005017.1 mouse_genomes_project 1 170089266 170092153 + Gm29500 lincRNA lincRNA MGP_LPJ_T0000713.1 MGP_LPJ_G0000646.1 mouse_genomes_project 1 156009078 156012609 + TEC TEC MGP_LPJ_T0020072.1 MGP_LPJ_G0015995.1 mouse_genomes_project 1 61839759 61869316 + Ctla4 protein_coding processed_transcript MGP_LPJ_T0020073.1 MGP_LPJ_G0015995.1 mouse_genomes_project 1 61865624 61872416 + MGP_LPJ_P0020073 Ctla4 protein_coding protein_coding MGP_LPJ_T0020074.1 MGP_LPJ_G0015995.1 mouse_genomes_project 1 61865770 61871353 + MGP_LPJ_P0020074 Ctla4 protein_coding protein_coding MGP_LPJ_T0011924.1 MGP_LPJ_G0010015.1 mouse_genomes_project 1 18672262 18673425 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011870.1 MGP_LPJ_G0009961.1 mouse_genomes_project 1 2498614 2499694 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011932.1 MGP_LPJ_G0010023.1 mouse_genomes_project 1 20696134 20696936 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016979.1 MGP_LPJ_G0015027.1 mouse_genomes_project 1 141156002 141160948 - Gm15850 processed_transcript processed_transcript MGP_LPJ_T0016980.1 MGP_LPJ_G0015027.1 mouse_genomes_project 1 141157543 141160936 - Gm15850 processed_transcript processed_transcript MGP_LPJ_T0016981.1 MGP_LPJ_G0015027.1 mouse_genomes_project 1 141157543 141160936 - Gm15850 processed_transcript processed_transcript MGP_LPJ_T0016982.1 MGP_LPJ_G0015027.1 mouse_genomes_project 1 141157543 141160936 - Gm15850 processed_transcript processed_transcript MGP_LPJ_T0023461.1 MGP_LPJ_G0016693.1 mouse_genomes_project 1 179018827 179060292 + MGP_LPJ_P0023461 Copa protein_coding protein_coding MGP_LPJ_T0023462.1 MGP_LPJ_G0016693.1 mouse_genomes_project 1 179018941 179029986 + Copa protein_coding retained_intron MGP_LPJ_T0023463.1 MGP_LPJ_G0016693.1 mouse_genomes_project 1 179019103 179048062 + MGP_LPJ_P0023463 Copa protein_coding nonsense_mediated_decay MGP_LPJ_T0023464.1 MGP_LPJ_G0016693.1 mouse_genomes_project 1 179019129 179041971 + Copa protein_coding retained_intron MGP_LPJ_T0023465.1 MGP_LPJ_G0016693.1 mouse_genomes_project 1 179019130 179060297 + MGP_LPJ_P0023465 Copa protein_coding protein_coding MGP_LPJ_T0023466.1 MGP_LPJ_G0016693.1 mouse_genomes_project 1 179031675 179037698 + Copa protein_coding processed_transcript MGP_LPJ_T0023467.1 MGP_LPJ_G0016693.1 mouse_genomes_project 1 179036169 179043502 + MGP_LPJ_P0023467 Copa protein_coding nonsense_mediated_decay MGP_LPJ_T0023468.1 MGP_LPJ_G0016693.1 mouse_genomes_project 1 179049302 179052681 + Copa protein_coding retained_intron MGP_LPJ_T0023469.1 MGP_LPJ_G0016693.1 mouse_genomes_project 1 179051449 179060295 + Copa protein_coding retained_intron MGP_LPJ_T0023470.1 MGP_LPJ_G0016693.1 mouse_genomes_project 1 179055313 179056552 + Copa protein_coding retained_intron MGP_LPJ_T0019262.1 MGP_LPJ_G0015843.1 mouse_genomes_project 1 35470403 35602967 - MGP_LPJ_P0019262 Fam178b protein_coding protein_coding MGP_LPJ_T0019263.1 MGP_LPJ_G0015843.1 mouse_genomes_project 1 35470407 35500995 - Fam178b protein_coding processed_transcript MGP_LPJ_T0019264.1 MGP_LPJ_G0015843.1 mouse_genomes_project 1 35470407 35496980 - Fam178b protein_coding processed_transcript MGP_LPJ_T0019265.1 MGP_LPJ_G0015843.1 mouse_genomes_project 1 35470407 35508089 - MGP_LPJ_P0019265 Fam178b protein_coding nonsense_mediated_decay MGP_LPJ_T0019266.1 MGP_LPJ_G0015843.1 mouse_genomes_project 1 35472039 35508632 - MGP_LPJ_P0019266 Fam178b protein_coding nonsense_mediated_decay MGP_LPJ_T0019267.1 MGP_LPJ_G0015843.1 mouse_genomes_project 1 35472578 35495350 - Fam178b protein_coding processed_transcript MGP_LPJ_T0019268.1 MGP_LPJ_G0015843.1 mouse_genomes_project 1 35484144 35508110 - Fam178b protein_coding processed_transcript MGP_LPJ_T0019269.1 MGP_LPJ_G0015843.1 mouse_genomes_project 1 35507653 35602967 - MGP_LPJ_P0019269 Fam178b protein_coding protein_coding MGP_LPJ_T0000427.1 MGP_LPJ_G0000365.1 mouse_genomes_project 1 13892780 13895101 - TEC TEC MGP_LPJ_T0005677.1 MGP_LPJ_G0004776.1 mouse_genomes_project 1 14377045 14381773 + D030040B21Rik lincRNA lincRNA MGP_LPJ_T0012117.1 MGP_LPJ_G0010208.1 mouse_genomes_project 1 83808370 83809076 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012262.1 MGP_LPJ_G0010353.1 mouse_genomes_project 1 148147254 148147549 + processed_pseudogene processed_pseudogene MGP_LPJ_T0022710.1 MGP_LPJ_G0016537.1 mouse_genomes_project 1 162135528 162171244 + MGP_LPJ_P0022710 Tor1aip2 protein_coding protein_coding MGP_LPJ_T0022711.1 MGP_LPJ_G0016537.1 mouse_genomes_project 1 162135851 162154722 + MGP_LPJ_P0022711 Tor1aip2 protein_coding protein_coding MGP_LPJ_T0022712.1 MGP_LPJ_G0016537.1 mouse_genomes_project 1 162135897 162160735 + MGP_LPJ_P0022712 Tor1aip2 protein_coding protein_coding MGP_LPJ_T0022713.1 MGP_LPJ_G0016537.1 mouse_genomes_project 1 162136258 162154929 + MGP_LPJ_P0022713 Tor1aip2 protein_coding protein_coding MGP_LPJ_T0022714.1 MGP_LPJ_G0016537.1 mouse_genomes_project 1 162140772 162152862 + Tor1aip2 protein_coding processed_transcript MGP_LPJ_T0022715.1 MGP_LPJ_G0016537.1 mouse_genomes_project 1 162140772 162171244 + MGP_LPJ_P0022715 Tor1aip2 protein_coding protein_coding MGP_LPJ_T0022716.1 MGP_LPJ_G0016537.1 mouse_genomes_project 1 162140799 162154929 + MGP_LPJ_P0022716 Tor1aip2 protein_coding protein_coding MGP_LPJ_T0022717.1 MGP_LPJ_G0016537.1 mouse_genomes_project 1 162140799 162154929 + MGP_LPJ_P0022717 Tor1aip2 protein_coding protein_coding MGP_LPJ_T0022718.1 MGP_LPJ_G0016537.1 mouse_genomes_project 1 162160713 162167841 + MGP_LPJ_P0022718 Tor1aip2 protein_coding unknown_likely_coding MGP_LPJ_T0022719.1 MGP_LPJ_G0016537.1 mouse_genomes_project 1 162164404 162167225 + Tor1aip2 protein_coding retained_intron MGP_LPJ_T0005915.1 MGP_LPJ_G0004959.1 mouse_genomes_project 1 128884896 129250233 - lincRNA lincRNA MGP_LPJ_T0000463.1 MGP_LPJ_G0000399.1 mouse_genomes_project 1 31027875 31030545 + TEC TEC MGP_LPJ_T0000741.1 MGP_LPJ_G0000674.1 mouse_genomes_project 1 165589650 165590063 - TEC TEC MGP_LPJ_T0011869.1 MGP_LPJ_G0009960.1 mouse_genomes_project 1 2290937 2292525 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021200.1 MGP_LPJ_G0016217.1 mouse_genomes_project 1 93839627 93842319 + Rbm44 protein_coding retained_intron MGP_LPJ_T0021201.1 MGP_LPJ_G0016217.1 mouse_genomes_project 1 93839639 93847292 + MGP_LPJ_P0021201 Rbm44 protein_coding protein_coding MGP_LPJ_T0021202.1 MGP_LPJ_G0016217.1 mouse_genomes_project 1 93839641 93864794 + MGP_LPJ_P0021202 Rbm44 protein_coding protein_coding MGP_LPJ_T0021203.1 MGP_LPJ_G0016217.1 mouse_genomes_project 1 93862627 93864292 + Rbm44 protein_coding retained_intron MGP_LPJ_T0012204.1 MGP_LPJ_G0010295.1 mouse_genomes_project 1 122270517 122271680 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021931.1 MGP_LPJ_G0016379.1 mouse_genomes_project 1 136584946 136587726 + Slc41a1 protein_coding processed_transcript MGP_LPJ_T0021932.1 MGP_LPJ_G0016379.1 mouse_genomes_project 1 136585430 136606386 + MGP_LPJ_P0021932 Slc41a1 protein_coding protein_coding MGP_LPJ_T0021933.1 MGP_LPJ_G0016379.1 mouse_genomes_project 1 136600360 136604150 + Slc41a1 protein_coding retained_intron MGP_LPJ_T0009560.1 MGP_LPJ_G0007678.1 mouse_genomes_project 1 168655310 168655420 + Mir199a-2 miRNA miRNA MGP_LPJ_T0000619.1 MGP_LPJ_G0000554.1 mouse_genomes_project 1 110024239 110026321 - TEC TEC MGP_LPJ_T0002974.1 MGP_LPJ_G0002793.1 mouse_genomes_project 1 178830963 178840027 - Gm37065 antisense antisense MGP_LPJ_T0009490.1 MGP_LPJ_G0007608.1 mouse_genomes_project 1 27691560 27691648 + Gm22679 miRNA miRNA MGP_LPJ_T0002881.1 MGP_LPJ_G0002723.1 mouse_genomes_project 1 95696098 95698485 - 5033417F24Rik antisense antisense MGP_LPJ_T0019544.1 MGP_LPJ_G0015899.1 mouse_genomes_project 1 43413403 43419388 - MGP_LPJ_P0019544 Gm8251 protein_coding protein_coding MGP_LPJ_T0022910.1 MGP_LPJ_G0016568.1 mouse_genomes_project 1 167492540 167515290 + MGP_LPJ_P0022910 Ankrd45 protein_coding protein_coding MGP_LPJ_T0022911.1 MGP_LPJ_G0016568.1 mouse_genomes_project 1 167492561 167522222 + MGP_LPJ_P0022911 Ankrd45 protein_coding protein_coding MGP_LPJ_T0022912.1 MGP_LPJ_G0016568.1 mouse_genomes_project 1 167492572 167519636 + MGP_LPJ_P0022912 Ankrd45 protein_coding nonsense_mediated_decay MGP_LPJ_T0022913.1 MGP_LPJ_G0016568.1 mouse_genomes_project 1 167492589 167516208 + MGP_LPJ_P0022913 Ankrd45 protein_coding nonsense_mediated_decay MGP_LPJ_T0022914.1 MGP_LPJ_G0016568.1 mouse_genomes_project 1 167492616 167516185 + MGP_LPJ_P0022914 Ankrd45 protein_coding protein_coding MGP_LPJ_T0005997.1 MGP_LPJ_G0005025.1 mouse_genomes_project 1 171503383 171505272 + 1700029M03Rik lincRNA lincRNA MGP_LPJ_T0005998.1 MGP_LPJ_G0005025.1 mouse_genomes_project 1 171503385 171503865 + 1700029M03Rik lincRNA lincRNA MGP_LPJ_T0009534.1 MGP_LPJ_G0007652.1 mouse_genomes_project 1 96070792 96070854 + Mir6901 miRNA miRNA MGP_LPJ_T0005860.1 MGP_LPJ_G0004916.1 mouse_genomes_project 1 94327063 94339296 + Gm28380 lincRNA lincRNA MGP_LPJ_T0098732.1 MGP_LPJ_G0036995.1 mouse_genomes_project 1 30180691 30180798 - Gm23032 snRNA snRNA MGP_LPJ_T0006063.1 MGP_LPJ_G0005076.1 mouse_genomes_project 1 194461782 194510786 - A730004F24Rik lincRNA lincRNA MGP_LPJ_T0006064.1 MGP_LPJ_G0005076.1 mouse_genomes_project 1 194461826 194510995 - A730004F24Rik lincRNA lincRNA MGP_LPJ_T0021844.1 MGP_LPJ_G0016357.1 mouse_genomes_project 1 135399038 135424452 - MGP_LPJ_P0021844 protein_coding protein_coding MGP_LPJ_T0021845.1 MGP_LPJ_G0016357.1 mouse_genomes_project 1 135399045 135402102 - protein_coding retained_intron MGP_LPJ_T0021846.1 MGP_LPJ_G0016357.1 mouse_genomes_project 1 135400134 135440947 - MGP_LPJ_P0021846 protein_coding protein_coding MGP_LPJ_T0021847.1 MGP_LPJ_G0016357.1 mouse_genomes_project 1 135400871 135424453 - MGP_LPJ_P0021847 protein_coding protein_coding MGP_LPJ_T0021848.1 MGP_LPJ_G0016357.1 mouse_genomes_project 1 135400871 135424453 - MGP_LPJ_P0021848 protein_coding protein_coding MGP_LPJ_T0021849.1 MGP_LPJ_G0016357.1 mouse_genomes_project 1 135407569 135424452 - MGP_LPJ_P0021849 protein_coding protein_coding MGP_LPJ_T0021850.1 MGP_LPJ_G0016357.1 mouse_genomes_project 1 135407569 135424452 - MGP_LPJ_P0021850 protein_coding nonsense_mediated_decay MGP_LPJ_T0021851.1 MGP_LPJ_G0016357.1 mouse_genomes_project 1 135407569 135424452 - MGP_LPJ_P0021851 protein_coding nonsense_mediated_decay MGP_LPJ_T0021852.1 MGP_LPJ_G0016357.1 mouse_genomes_project 1 135407757 135425634 - MGP_LPJ_P0021852 protein_coding protein_coding MGP_LPJ_T0021853.1 MGP_LPJ_G0016357.1 mouse_genomes_project 1 135417456 135427131 - MGP_LPJ_P0021853 protein_coding nonsense_mediated_decay MGP_LPJ_T0012054.1 MGP_LPJ_G0010145.1 mouse_genomes_project 1 60861904 60863966 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012151.1 MGP_LPJ_G0010242.1 mouse_genomes_project 1 101846179 101846893 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012120.1 MGP_LPJ_G0010211.1 mouse_genomes_project 1 85073918 85075344 - processed_pseudogene processed_pseudogene MGP_LPJ_T0020811.1 MGP_LPJ_G0016134.1 mouse_genomes_project 1 84761500 84789606 + MGP_LPJ_P0020811 Mff protein_coding protein_coding MGP_LPJ_T0020812.1 MGP_LPJ_G0016134.1 mouse_genomes_project 1 84761528 84772119 + Mff protein_coding processed_transcript MGP_LPJ_T0020813.1 MGP_LPJ_G0016134.1 mouse_genomes_project 1 84761529 84789603 + MGP_LPJ_P0020813 Mff protein_coding protein_coding MGP_LPJ_T0020814.1 MGP_LPJ_G0016134.1 mouse_genomes_project 1 84761535 84789606 + MGP_LPJ_P0020814 Mff protein_coding protein_coding MGP_LPJ_T0020815.1 MGP_LPJ_G0016134.1 mouse_genomes_project 1 84761544 84773340 + Mff protein_coding retained_intron MGP_LPJ_T0020816.1 MGP_LPJ_G0016134.1 mouse_genomes_project 1 84761549 84789616 + MGP_LPJ_P0020816 Mff protein_coding unknown_likely_coding MGP_LPJ_T0020817.1 MGP_LPJ_G0016134.1 mouse_genomes_project 1 84761550 84789566 + MGP_LPJ_P0020817 Mff protein_coding protein_coding MGP_LPJ_T0020818.1 MGP_LPJ_G0016134.1 mouse_genomes_project 1 84761558 84789610 + MGP_LPJ_P0020818 Mff protein_coding protein_coding MGP_LPJ_T0020819.1 MGP_LPJ_G0016134.1 mouse_genomes_project 1 84765840 84789606 + MGP_LPJ_P0020819 Mff protein_coding protein_coding MGP_LPJ_T0020820.1 MGP_LPJ_G0016134.1 mouse_genomes_project 1 84765883 84788857 + MGP_LPJ_P0020820 Mff protein_coding protein_coding MGP_LPJ_T0020821.1 MGP_LPJ_G0016134.1 mouse_genomes_project 1 84765937 84787797 + MGP_LPJ_P0020821 Mff protein_coding protein_coding MGP_LPJ_T0020822.1 MGP_LPJ_G0016134.1 mouse_genomes_project 1 84765937 84779097 + MGP_LPJ_P0020822 Mff protein_coding protein_coding MGP_LPJ_T0020823.1 MGP_LPJ_G0016134.1 mouse_genomes_project 1 84772081 84789374 + MGP_LPJ_P0020823 Mff protein_coding protein_coding MGP_LPJ_T0020824.1 MGP_LPJ_G0016134.1 mouse_genomes_project 1 84778851 84788935 + Mff protein_coding retained_intron MGP_LPJ_T0020825.1 MGP_LPJ_G0016134.1 mouse_genomes_project 1 84779190 84783108 + Mff protein_coding retained_intron MGP_LPJ_T0020826.1 MGP_LPJ_G0016134.1 mouse_genomes_project 1 84784135 84789102 + Mff protein_coding retained_intron MGP_LPJ_T0020827.1 MGP_LPJ_G0016134.1 mouse_genomes_project 1 84785604 84788944 + Mff protein_coding retained_intron MGP_LPJ_T0000642.1 MGP_LPJ_G0000577.1 mouse_genomes_project 1 130554539 130555861 - TEC TEC MGP_LPJ_T0000581.1 MGP_LPJ_G0000516.1 mouse_genomes_project 1 88465317 88468000 + TEC TEC MGP_LPJ_T0012205.1 MGP_LPJ_G0010296.1 mouse_genomes_project 1 122520658 122521646 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100033.1 MGP_LPJ_G0038296.1 mouse_genomes_project 1 167376969 167377052 + Gm22357 snoRNA snoRNA MGP_LPJ_T0002849.1 MGP_LPJ_G0002699.1 mouse_genomes_project 1 70933998 70967700 + Gm29114 antisense antisense MGP_LPJ_T0021218.1 MGP_LPJ_G0016220.1 mouse_genomes_project 1 93994856 94020520 + MGP_LPJ_P0021218 Scly protein_coding protein_coding MGP_LPJ_T0021219.1 MGP_LPJ_G0016220.1 mouse_genomes_project 1 93994878 94000334 + Scly protein_coding retained_intron MGP_LPJ_T0021220.1 MGP_LPJ_G0016220.1 mouse_genomes_project 1 93994886 94006623 + MGP_LPJ_P0021220 Scly protein_coding protein_coding MGP_LPJ_T0021221.1 MGP_LPJ_G0016220.1 mouse_genomes_project 1 93994887 94007731 + MGP_LPJ_P0021221 Scly protein_coding nonsense_mediated_decay MGP_LPJ_T0021222.1 MGP_LPJ_G0016220.1 mouse_genomes_project 1 93994888 94009210 + Scly protein_coding retained_intron MGP_LPJ_T0021223.1 MGP_LPJ_G0016220.1 mouse_genomes_project 1 93994922 94006589 + MGP_LPJ_P0021223 Scly protein_coding protein_coding MGP_LPJ_T0021224.1 MGP_LPJ_G0016220.1 mouse_genomes_project 1 93994925 94006695 + MGP_LPJ_P0021224 Scly protein_coding protein_coding MGP_LPJ_T0021225.1 MGP_LPJ_G0016220.1 mouse_genomes_project 1 93994945 94002260 + Scly protein_coding processed_transcript MGP_LPJ_T0021226.1 MGP_LPJ_G0016220.1 mouse_genomes_project 1 93996753 93999692 + MGP_LPJ_P0021226 Scly protein_coding protein_coding MGP_LPJ_T0021227.1 MGP_LPJ_G0016220.1 mouse_genomes_project 1 93999619 94007752 + MGP_LPJ_P0021227 Scly protein_coding protein_coding MGP_LPJ_T0006043.1 MGP_LPJ_G0005062.1 mouse_genomes_project 1 191722406 191723232 + Gm38108 lincRNA lincRNA MGP_LPJ_T0024210.1 MGP_LPJ_G0016871.1 mouse_genomes_project 1 201094195 201105464 - MGP_LPJ_P0024210 Sertad4 protein_coding protein_coding MGP_LPJ_T0024211.1 MGP_LPJ_G0016871.1 mouse_genomes_project 1 201094196 201101455 - MGP_LPJ_P0024211 Sertad4 protein_coding protein_coding MGP_LPJ_T0024212.1 MGP_LPJ_G0016871.1 mouse_genomes_project 1 201096770 201101455 - MGP_LPJ_P0024212 Sertad4 protein_coding protein_coding MGP_LPJ_T0024213.1 MGP_LPJ_G0016871.1 mouse_genomes_project 1 201103909 201105194 - Sertad4 protein_coding processed_transcript MGP_LPJ_T0019887.1 MGP_LPJ_G0015966.1 mouse_genomes_project 1 59191727 59206639 - MGP_LPJ_P0019887 Ppil3 protein_coding protein_coding MGP_LPJ_T0019888.1 MGP_LPJ_G0015966.1 mouse_genomes_project 1 59191727 59206634 - MGP_LPJ_P0019888 Ppil3 protein_coding protein_coding MGP_LPJ_T0019889.1 MGP_LPJ_G0015966.1 mouse_genomes_project 1 59191730 59206691 - MGP_LPJ_P0019889 Ppil3 protein_coding protein_coding MGP_LPJ_T0019890.1 MGP_LPJ_G0015966.1 mouse_genomes_project 1 59191751 59192916 - Ppil3 protein_coding processed_transcript MGP_LPJ_T0019891.1 MGP_LPJ_G0015966.1 mouse_genomes_project 1 59194516 59206574 - MGP_LPJ_P0019891 Ppil3 protein_coding protein_coding MGP_LPJ_T0019892.1 MGP_LPJ_G0015966.1 mouse_genomes_project 1 59195144 59206644 - MGP_LPJ_P0019892 Ppil3 protein_coding protein_coding MGP_LPJ_T0019893.1 MGP_LPJ_G0015966.1 mouse_genomes_project 1 59195148 59206687 - MGP_LPJ_P0019893 Ppil3 protein_coding protein_coding MGP_LPJ_T0019894.1 MGP_LPJ_G0015966.1 mouse_genomes_project 1 59199610 59206381 - Ppil3 protein_coding retained_intron MGP_LPJ_T0019895.1 MGP_LPJ_G0015966.1 mouse_genomes_project 1 59200269 59202407 - Ppil3 protein_coding retained_intron MGP_LPJ_T0005953.1 MGP_LPJ_G0004991.1 mouse_genomes_project 1 154719524 154740730 + Gm29020 lincRNA lincRNA MGP_LPJ_T0098775.1 MGP_LPJ_G0037038.1 mouse_genomes_project 1 126759458 126759607 + Gm24547 snRNA snRNA MGP_LPJ_T0023035.1 MGP_LPJ_G0016594.1 mouse_genomes_project 1 170487147 170489991 + MGP_LPJ_P0023035 Mettl18 protein_coding protein_coding MGP_LPJ_T0023036.1 MGP_LPJ_G0016594.1 mouse_genomes_project 1 170487147 170489991 + MGP_LPJ_P0023036 Mettl18 protein_coding protein_coding MGP_LPJ_T0016988.1 MGP_LPJ_G0015031.1 mouse_genomes_project 1 152262160 152265195 - A230059L01Rik processed_transcript antisense MGP_LPJ_T0016989.1 MGP_LPJ_G0015031.1 mouse_genomes_project 1 152264005 152266282 - A230059L01Rik processed_transcript TEC MGP_LPJ_T0023271.1 MGP_LPJ_G0016653.1 mouse_genomes_project 1 177777325 177783011 - MGP_LPJ_P0023271 Fcrlb protein_coding protein_coding MGP_LPJ_T0012053.1 MGP_LPJ_G0010144.1 mouse_genomes_project 1 60545850 60546235 + processed_pseudogene processed_pseudogene MGP_LPJ_T0022035.1 MGP_LPJ_G0016398.1 mouse_genomes_project 1 137876118 137897757 + MGP_LPJ_P0022035 Pik3c2b protein_coding protein_coding MGP_LPJ_T0022036.1 MGP_LPJ_G0016398.1 mouse_genomes_project 1 137876463 137898561 + Pik3c2b protein_coding retained_intron MGP_LPJ_T0022037.1 MGP_LPJ_G0016398.1 mouse_genomes_project 1 137876463 137911848 + Pik3c2b protein_coding retained_intron MGP_LPJ_T0022038.1 MGP_LPJ_G0016398.1 mouse_genomes_project 1 137876463 137939040 + MGP_LPJ_P0022038 Pik3c2b protein_coding protein_coding MGP_LPJ_T0019726.1 MGP_LPJ_G0015932.1 mouse_genomes_project 1 53263382 53284484 + MGP_LPJ_P0019726 Gm28778 protein_coding protein_coding MGP_LPJ_T0000649.1 MGP_LPJ_G0000584.1 mouse_genomes_project 1 132709918 132712414 + TEC TEC MGP_LPJ_T0006002.1 MGP_LPJ_G0005028.1 mouse_genomes_project 1 172336484 172337772 - Gm36972 lincRNA lincRNA MGP_LPJ_T0000671.1 MGP_LPJ_G0000605.1 mouse_genomes_project 1 139013303 139016058 - TEC TEC MGP_LPJ_T0023350.1 MGP_LPJ_G0016669.1 mouse_genomes_project 1 178182756 178187941 - Ppox protein_coding retained_intron MGP_LPJ_T0023351.1 MGP_LPJ_G0016669.1 mouse_genomes_project 1 178183727 178187941 - Ppox protein_coding retained_intron MGP_LPJ_T0023352.1 MGP_LPJ_G0016669.1 mouse_genomes_project 1 178183727 178187941 - MGP_LPJ_P0023352 Ppox protein_coding protein_coding MGP_LPJ_T0023353.1 MGP_LPJ_G0016669.1 mouse_genomes_project 1 178184182 178187514 - MGP_LPJ_P0023353 Ppox protein_coding protein_coding MGP_LPJ_T0023354.1 MGP_LPJ_G0016669.1 mouse_genomes_project 1 178184870 178186567 - Ppox protein_coding retained_intron MGP_LPJ_T0023355.1 MGP_LPJ_G0016669.1 mouse_genomes_project 1 178186600 178187276 - Ppox protein_coding processed_transcript MGP_LPJ_T0023356.1 MGP_LPJ_G0016669.1 mouse_genomes_project 1 178186847 178187941 - Ppox protein_coding retained_intron MGP_LPJ_T0023357.1 MGP_LPJ_G0016669.1 mouse_genomes_project 1 178187118 178187874 - Ppox protein_coding retained_intron MGP_LPJ_T0006036.1 MGP_LPJ_G0005056.1 mouse_genomes_project 1 190096834 190112168 + 1700047M11Rik lincRNA lincRNA MGP_LPJ_T0006037.1 MGP_LPJ_G0005056.1 mouse_genomes_project 1 190109676 190112130 + 1700047M11Rik lincRNA lincRNA MGP_LPJ_T0021284.1 MGP_LPJ_G0016233.1 mouse_genomes_project 1 95241597 95242627 - MGP_LPJ_P0021284 Olfr1416 protein_coding protein_coding MGP_LPJ_T0021285.1 MGP_LPJ_G0016233.1 mouse_genomes_project 1 95241597 95252021 - MGP_LPJ_P0021285 Olfr1416 protein_coding protein_coding MGP_LPJ_T0002918.1 MGP_LPJ_G0002747.1 mouse_genomes_project 1 138806631 138816787 + Gm15851 antisense antisense MGP_LPJ_T0018686.1 MGP_LPJ_G0015732.1 mouse_genomes_project 1 2300024 2395705 + MGP_LPJ_P0018686 Atp6v1h protein_coding protein_coding MGP_LPJ_T0018687.1 MGP_LPJ_G0015732.1 mouse_genomes_project 1 2314939 2395894 + MGP_LPJ_P0018687 Atp6v1h protein_coding protein_coding MGP_LPJ_T0018688.1 MGP_LPJ_G0015732.1 mouse_genomes_project 1 2314969 2327626 + MGP_LPJ_P0018688 Atp6v1h protein_coding protein_coding MGP_LPJ_T0018689.1 MGP_LPJ_G0015732.1 mouse_genomes_project 1 2314983 2374159 + Atp6v1h protein_coding retained_intron MGP_LPJ_T0018690.1 MGP_LPJ_G0015732.1 mouse_genomes_project 1 2314991 2318645 + Atp6v1h protein_coding retained_intron MGP_LPJ_T0018691.1 MGP_LPJ_G0015732.1 mouse_genomes_project 1 2314991 2327557 + MGP_LPJ_P0018691 Atp6v1h protein_coding protein_coding MGP_LPJ_T0018692.1 MGP_LPJ_G0015732.1 mouse_genomes_project 1 2315013 2395784 + MGP_LPJ_P0018692 Atp6v1h protein_coding protein_coding MGP_LPJ_T0018693.1 MGP_LPJ_G0015732.1 mouse_genomes_project 1 2315023 2331676 + Atp6v1h protein_coding retained_intron MGP_LPJ_T0022551.1 MGP_LPJ_G0016506.1 mouse_genomes_project 1 158389501 158648996 - MGP_LPJ_P0022551 Rgl1 protein_coding protein_coding MGP_LPJ_T0022552.1 MGP_LPJ_G0016506.1 mouse_genomes_project 1 158389692 158501556 - MGP_LPJ_P0022552 Rgl1 protein_coding protein_coding MGP_LPJ_T0022553.1 MGP_LPJ_G0016506.1 mouse_genomes_project 1 158391475 158649042 - MGP_LPJ_P0022553 Rgl1 protein_coding protein_coding MGP_LPJ_T0022554.1 MGP_LPJ_G0016506.1 mouse_genomes_project 1 158426219 158427756 - Rgl1 protein_coding retained_intron MGP_LPJ_T0022555.1 MGP_LPJ_G0016506.1 mouse_genomes_project 1 158432258 158467418 - Rgl1 protein_coding processed_transcript MGP_LPJ_T0022556.1 MGP_LPJ_G0016506.1 mouse_genomes_project 1 158432258 158501359 - MGP_LPJ_P0022556 Rgl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024188.1 MGP_LPJ_G0016868.1 mouse_genomes_project 1 200317498 200362201 - MGP_LPJ_P0024188 Rcor3 protein_coding protein_coding MGP_LPJ_T0024189.1 MGP_LPJ_G0016868.1 mouse_genomes_project 1 200317698 200362059 - MGP_LPJ_P0024189 Rcor3 protein_coding protein_coding MGP_LPJ_T0024190.1 MGP_LPJ_G0016868.1 mouse_genomes_project 1 200317708 200362192 - MGP_LPJ_P0024190 Rcor3 protein_coding nonsense_mediated_decay MGP_LPJ_T0024191.1 MGP_LPJ_G0016868.1 mouse_genomes_project 1 200319521 200336827 - MGP_LPJ_P0024191 Rcor3 protein_coding nonsense_mediated_decay MGP_LPJ_T0024192.1 MGP_LPJ_G0016868.1 mouse_genomes_project 1 200319844 200345485 - MGP_LPJ_P0024192 Rcor3 protein_coding protein_coding MGP_LPJ_T0024193.1 MGP_LPJ_G0016868.1 mouse_genomes_project 1 200320325 200362088 - MGP_LPJ_P0024193 Rcor3 protein_coding protein_coding MGP_LPJ_T0024194.1 MGP_LPJ_G0016868.1 mouse_genomes_project 1 200325123 200327789 - Rcor3 protein_coding retained_intron MGP_LPJ_T0024195.1 MGP_LPJ_G0016868.1 mouse_genomes_project 1 200352014 200355426 - Rcor3 protein_coding retained_intron MGP_LPJ_T0024196.1 MGP_LPJ_G0016868.1 mouse_genomes_project 1 200352158 200361824 - MGP_LPJ_P0024196 Rcor3 protein_coding protein_coding MGP_LPJ_T0024197.1 MGP_LPJ_G0016868.1 mouse_genomes_project 1 200358366 200362196 - Rcor3 protein_coding retained_intron MGP_LPJ_T0024198.1 MGP_LPJ_G0016868.1 mouse_genomes_project 1 200360565 200362171 - Rcor3 protein_coding processed_transcript MGP_LPJ_T0024199.1 MGP_LPJ_G0016868.1 mouse_genomes_project 1 200360856 200362185 - Rcor3 protein_coding processed_transcript MGP_LPJ_T0002997.1 MGP_LPJ_G0002813.1 mouse_genomes_project 1 194674183 194675496 + Gm29491 antisense antisense MGP_LPJ_T0018847.1 MGP_LPJ_G0015754.1 mouse_genomes_project 1 10212924 10382534 + MGP_LPJ_P0018847 Sulf1 protein_coding protein_coding MGP_LPJ_T0018848.1 MGP_LPJ_G0015754.1 mouse_genomes_project 1 10239512 10348189 + Sulf1 protein_coding retained_intron MGP_LPJ_T0018849.1 MGP_LPJ_G0015754.1 mouse_genomes_project 1 10240606 10309366 + MGP_LPJ_P0018849 Sulf1 protein_coding protein_coding MGP_LPJ_T0018850.1 MGP_LPJ_G0015754.1 mouse_genomes_project 1 10249265 10309456 + MGP_LPJ_P0018850 Sulf1 protein_coding protein_coding MGP_LPJ_T0018851.1 MGP_LPJ_G0015754.1 mouse_genomes_project 1 10299787 10389687 + MGP_LPJ_P0018851 Sulf1 protein_coding protein_coding MGP_LPJ_T0018852.1 MGP_LPJ_G0015754.1 mouse_genomes_project 1 10308258 10311635 + Sulf1 protein_coding retained_intron MGP_LPJ_T0018853.1 MGP_LPJ_G0015754.1 mouse_genomes_project 1 10364517 10368979 + Sulf1 protein_coding retained_intron MGP_LPJ_T0018854.1 MGP_LPJ_G0015754.1 mouse_genomes_project 1 10371096 10391250 + MGP_LPJ_P0018854 Sulf1 protein_coding protein_coding MGP_LPJ_T0023252.1 MGP_LPJ_G0016648.1 mouse_genomes_project 1 177124314 177127621 + MGP_LPJ_P0023252 1700015E13Rik protein_coding protein_coding MGP_LPJ_T0020264.1 MGP_LPJ_G0016033.1 mouse_genomes_project 1 68222227 68268455 - MGP_LPJ_P0020264 Lancl1 protein_coding protein_coding MGP_LPJ_T0020265.1 MGP_LPJ_G0016033.1 mouse_genomes_project 1 68222227 68268448 - MGP_LPJ_P0020265 Lancl1 protein_coding protein_coding MGP_LPJ_T0020266.1 MGP_LPJ_G0016033.1 mouse_genomes_project 1 68226511 68268417 - MGP_LPJ_P0020266 Lancl1 protein_coding protein_coding MGP_LPJ_T0020267.1 MGP_LPJ_G0016033.1 mouse_genomes_project 1 68230153 68248004 - Lancl1 protein_coding processed_transcript MGP_LPJ_T0020268.1 MGP_LPJ_G0016033.1 mouse_genomes_project 1 68233090 68268417 - MGP_LPJ_P0020268 Lancl1 protein_coding protein_coding MGP_LPJ_T0020269.1 MGP_LPJ_G0016033.1 mouse_genomes_project 1 68246547 68249150 - Lancl1 protein_coding retained_intron MGP_LPJ_T0011273.1 MGP_LPJ_G0009391.1 mouse_genomes_project 1 172041759 172042010 - Gm23599 misc_RNA misc_RNA MGP_LPJ_T0012273.1 MGP_LPJ_G0010364.1 mouse_genomes_project 1 154065219 154065522 + processed_pseudogene processed_pseudogene MGP_LPJ_T0023630.1 MGP_LPJ_G0016754.1 mouse_genomes_project 1 182915343 182955043 + MGP_LPJ_P0023630 Kmo protein_coding nonsense_mediated_decay MGP_LPJ_T0023631.1 MGP_LPJ_G0016754.1 mouse_genomes_project 1 182926981 182955934 + MGP_LPJ_P0023631 Kmo protein_coding protein_coding MGP_LPJ_T0023632.1 MGP_LPJ_G0016754.1 mouse_genomes_project 1 182926986 182949144 + Kmo protein_coding retained_intron MGP_LPJ_T0023633.1 MGP_LPJ_G0016754.1 mouse_genomes_project 1 182927011 182932324 + Kmo protein_coding processed_transcript MGP_LPJ_T0023634.1 MGP_LPJ_G0016754.1 mouse_genomes_project 1 182927165 182957148 + MGP_LPJ_P0023634 Kmo protein_coding protein_coding MGP_LPJ_T0023635.1 MGP_LPJ_G0016754.1 mouse_genomes_project 1 182927224 182944049 + Kmo protein_coding processed_transcript MGP_LPJ_T0022915.1 MGP_LPJ_G0016569.1 mouse_genomes_project 1 167594778 167609337 - MGP_LPJ_P0022915 Prdx6 protein_coding protein_coding MGP_LPJ_T0022916.1 MGP_LPJ_G0016569.1 mouse_genomes_project 1 167595704 167609090 - MGP_LPJ_P0022916 Prdx6 protein_coding nonsense_mediated_decay MGP_LPJ_T0022917.1 MGP_LPJ_G0016569.1 mouse_genomes_project 1 167598065 167609090 - Prdx6 protein_coding processed_transcript MGP_LPJ_T0022918.1 MGP_LPJ_G0016569.1 mouse_genomes_project 1 167598099 167609090 - MGP_LPJ_P0022918 Prdx6 protein_coding protein_coding MGP_LPJ_T0022919.1 MGP_LPJ_G0016569.1 mouse_genomes_project 1 167598136 167609045 - Prdx6 protein_coding processed_transcript MGP_LPJ_T0022920.1 MGP_LPJ_G0016569.1 mouse_genomes_project 1 167599724 167608478 - Prdx6 protein_coding processed_transcript MGP_LPJ_T0022921.1 MGP_LPJ_G0016569.1 mouse_genomes_project 1 167601538 167609090 - Prdx6 protein_coding processed_transcript MGP_LPJ_T0022922.1 MGP_LPJ_G0016569.1 mouse_genomes_project 1 167606536 167609086 - Prdx6 protein_coding retained_intron MGP_LPJ_T0022923.1 MGP_LPJ_G0016569.1 mouse_genomes_project 1 167607494 167609086 - Prdx6 protein_coding retained_intron MGP_LPJ_T0021877.1 MGP_LPJ_G0016366.1 mouse_genomes_project 1 135739423 135744551 + MGP_LPJ_P0021877 Il10 protein_coding protein_coding MGP_LPJ_T0012039.1 MGP_LPJ_G0010130.1 mouse_genomes_project 1 55075845 55076424 + processed_pseudogene processed_pseudogene MGP_LPJ_T0020374.1 MGP_LPJ_G0016055.1 mouse_genomes_project 1 75800953 75825243 + MGP_LPJ_P0020374 Rufy4 protein_coding protein_coding MGP_LPJ_T0020375.1 MGP_LPJ_G0016055.1 mouse_genomes_project 1 75800991 75824793 + MGP_LPJ_P0020375 Rufy4 protein_coding protein_coding MGP_LPJ_T0005755.1 MGP_LPJ_G0004833.1 mouse_genomes_project 1 52568609 52578887 - Gm28178 lincRNA lincRNA MGP_LPJ_T0024264.1 MGP_LPJ_G0016879.1 mouse_genomes_project 1 201546498 201547555 - MGP_LPJ_P0024264 G0s2 protein_coding protein_coding MGP_LPJ_T0000390.1 MGP_LPJ_G0000328.1 mouse_genomes_project 1 865059 866693 + TEC TEC MGP_LPJ_T0099956.1 MGP_LPJ_G0038219.1 mouse_genomes_project 1 11348718 11348849 - Gm26273 snoRNA snoRNA MGP_LPJ_T0005916.1 MGP_LPJ_G0004960.1 mouse_genomes_project 1 129614875 129621635 - 1700121L03Rik lincRNA lincRNA MGP_LPJ_T0012040.1 MGP_LPJ_G0010131.1 mouse_genomes_project 1 55604908 55605714 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005895.1 MGP_LPJ_G0004945.1 mouse_genomes_project 1 123385600 123408401 - Gm29456 lincRNA lincRNA MGP_LPJ_T0006080.1 MGP_LPJ_G0005090.1 mouse_genomes_project 1 201091368 201092442 + 1700065J18Rik lincRNA lincRNA MGP_LPJ_T0006081.1 MGP_LPJ_G0005090.1 mouse_genomes_project 1 201091378 201092448 + 1700065J18Rik lincRNA lincRNA MGP_LPJ_T0101739.1 MGP_LPJ_G0039777.1 mouse_genomes_project 1 185466799 185491543 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0012022.1 MGP_LPJ_G0010113.1 mouse_genomes_project 1 49042647 49043640 + processed_pseudogene processed_pseudogene MGP_LPJ_T0020965.1 MGP_LPJ_G0016163.1 mouse_genomes_project 1 88748712 88750624 - MGP_LPJ_P0020965 Nmur1 protein_coding protein_coding MGP_LPJ_T0021094.1 MGP_LPJ_G0016188.1 mouse_genomes_project 1 90369870 90401097 - MGP_LPJ_P0021094 Usp40 protein_coding nonsense_mediated_decay MGP_LPJ_T0021095.1 MGP_LPJ_G0016188.1 mouse_genomes_project 1 90369872 90438713 - MGP_LPJ_P0021095 Usp40 protein_coding protein_coding MGP_LPJ_T0021096.1 MGP_LPJ_G0016188.1 mouse_genomes_project 1 90371196 90438696 - MGP_LPJ_P0021096 Usp40 protein_coding nonsense_mediated_decay MGP_LPJ_T0021097.1 MGP_LPJ_G0016188.1 mouse_genomes_project 1 90371196 90438696 - MGP_LPJ_P0021097 Usp40 protein_coding protein_coding MGP_LPJ_T0021098.1 MGP_LPJ_G0016188.1 mouse_genomes_project 1 90374455 90376430 - Usp40 protein_coding retained_intron MGP_LPJ_T0021099.1 MGP_LPJ_G0016188.1 mouse_genomes_project 1 90389798 90391927 - Usp40 protein_coding retained_intron MGP_LPJ_T0021100.1 MGP_LPJ_G0016188.1 mouse_genomes_project 1 90412813 90438690 - Usp40 protein_coding retained_intron MGP_LPJ_T0021101.1 MGP_LPJ_G0016188.1 mouse_genomes_project 1 90434825 90438712 - Usp40 protein_coding retained_intron MGP_LPJ_T0021102.1 MGP_LPJ_G0016188.1 mouse_genomes_project 1 90434825 90438391 - Usp40 protein_coding retained_intron MGP_LPJ_T0012071.1 MGP_LPJ_G0010162.1 mouse_genomes_project 1 64052055 64052423 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002825.1 MGP_LPJ_G0002680.1 mouse_genomes_project 1 44103725 44109027 - 4930521E06Rik antisense antisense MGP_LPJ_T0099992.1 MGP_LPJ_G0038255.1 mouse_genomes_project 1 68521631 68521760 + Gm26342 snoRNA snoRNA MGP_LPJ_T0006013.1 MGP_LPJ_G0005038.1 mouse_genomes_project 1 177851393 177856176 + Gm10522 lincRNA lincRNA MGP_LPJ_T0009482.1 MGP_LPJ_G0007600.1 mouse_genomes_project 1 6184319 6184429 + Gm24276 miRNA miRNA MGP_LPJ_T0019698.1 MGP_LPJ_G0015925.1 mouse_genomes_project 1 52775281 52807066 - MGP_LPJ_P0019698 Inpp1 protein_coding protein_coding MGP_LPJ_T0019699.1 MGP_LPJ_G0015925.1 mouse_genomes_project 1 52779141 52788958 - MGP_LPJ_P0019699 Inpp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0019700.1 MGP_LPJ_G0015925.1 mouse_genomes_project 1 52779529 52784518 - Inpp1 protein_coding retained_intron MGP_LPJ_T0019701.1 MGP_LPJ_G0015925.1 mouse_genomes_project 1 52784134 52806946 - MGP_LPJ_P0019701 Inpp1 protein_coding protein_coding MGP_LPJ_T0019702.1 MGP_LPJ_G0015925.1 mouse_genomes_project 1 52786448 52806829 - Inpp1 protein_coding retained_intron MGP_LPJ_T0019703.1 MGP_LPJ_G0015925.1 mouse_genomes_project 1 52786535 52789841 - MGP_LPJ_P0019703 Inpp1 protein_coding protein_coding MGP_LPJ_T0022639.1 MGP_LPJ_G0016526.1 mouse_genomes_project 1 160405782 160760999 - MGP_LPJ_P0022639 Cacna1e protein_coding protein_coding MGP_LPJ_T0022640.1 MGP_LPJ_G0016526.1 mouse_genomes_project 1 160407582 160760570 - MGP_LPJ_P0022640 Cacna1e protein_coding protein_coding MGP_LPJ_T0022641.1 MGP_LPJ_G0016526.1 mouse_genomes_project 1 160413896 160760569 - MGP_LPJ_P0022641 Cacna1e protein_coding unknown_likely_coding MGP_LPJ_T0022642.1 MGP_LPJ_G0016526.1 mouse_genomes_project 1 160485989 160493639 - Cacna1e protein_coding retained_intron MGP_LPJ_T0022643.1 MGP_LPJ_G0016526.1 mouse_genomes_project 1 160497997 160856560 - Cacna1e protein_coding retained_intron MGP_LPJ_T0022644.1 MGP_LPJ_G0016526.1 mouse_genomes_project 1 160733771 160924198 - Cacna1e protein_coding retained_intron MGP_LPJ_T0022645.1 MGP_LPJ_G0016526.1 mouse_genomes_project 1 160921860 160923721 - Cacna1e protein_coding retained_intron MGP_LPJ_T0005816.1 MGP_LPJ_G0004877.1 mouse_genomes_project 1 75395448 75499390 - Gm29183 lincRNA lincRNA MGP_LPJ_T0012158.1 MGP_LPJ_G0010249.1 mouse_genomes_project 1 103852728 103853083 + processed_pseudogene processed_pseudogene MGP_LPJ_T0023069.1 MGP_LPJ_G0016603.1 mouse_genomes_project 1 170961638 170984179 - MGP_LPJ_P0023069 Atp1b1 protein_coding protein_coding MGP_LPJ_T0023070.1 MGP_LPJ_G0016603.1 mouse_genomes_project 1 170965988 170968249 - Atp1b1 protein_coding processed_transcript MGP_LPJ_T0023071.1 MGP_LPJ_G0016603.1 mouse_genomes_project 1 170965988 170979604 - MGP_LPJ_P0023071 Atp1b1 protein_coding protein_coding MGP_LPJ_T0023072.1 MGP_LPJ_G0016603.1 mouse_genomes_project 1 170979088 170983846 - Atp1b1 protein_coding retained_intron MGP_LPJ_T0020891.1 MGP_LPJ_G0016146.1 mouse_genomes_project 1 87019957 87054870 - MGP_LPJ_P0020891 Slc16a14 protein_coding protein_coding MGP_LPJ_T0020892.1 MGP_LPJ_G0016146.1 mouse_genomes_project 1 87049238 87054593 - MGP_LPJ_P0020892 Slc16a14 protein_coding protein_coding MGP_LPJ_T0009506.1 MGP_LPJ_G0007624.1 mouse_genomes_project 1 55296924 55297029 + Gm24053 miRNA miRNA MGP_LPJ_T0024051.1 MGP_LPJ_G0016841.1 mouse_genomes_project 1 196296992 196391121 + Ush2a protein_coding retained_intron MGP_LPJ_T0024052.1 MGP_LPJ_G0016841.1 mouse_genomes_project 1 196297004 196485810 + Ush2a protein_coding retained_intron MGP_LPJ_T0024053.1 MGP_LPJ_G0016841.1 mouse_genomes_project 1 196298003 197021561 + MGP_LPJ_P0024053 Ush2a protein_coding protein_coding MGP_LPJ_T0024054.1 MGP_LPJ_G0016841.1 mouse_genomes_project 1 196579058 196728449 + Ush2a protein_coding retained_intron MGP_LPJ_T0024055.1 MGP_LPJ_G0016841.1 mouse_genomes_project 1 197008133 197021485 + MGP_LPJ_P0024055 Ush2a protein_coding protein_coding MGP_LPJ_T0098758.1 MGP_LPJ_G0037021.1 mouse_genomes_project 1 73811008 73811199 + Gm25939 snRNA snRNA MGP_LPJ_T0012339.1 MGP_LPJ_G0010430.1 mouse_genomes_project 1 184220288 184221125 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011860.1 MGP_LPJ_G0009951.1 mouse_genomes_project 1 1462345 1466127 - processed_pseudogene processed_pseudogene MGP_LPJ_T0020185.1 MGP_LPJ_G0016019.1 mouse_genomes_project 1 66178035 66180105 - MGP_LPJ_P0020185 Crygb protein_coding protein_coding MGP_LPJ_T0098771.1 MGP_LPJ_G0037034.1 mouse_genomes_project 1 121519148 121519312 + Gm24030 snRNA snRNA MGP_LPJ_T0023441.1 MGP_LPJ_G0016689.1 mouse_genomes_project 1 178838187 178873465 + MGP_LPJ_P0023441 Slamf6 protein_coding protein_coding MGP_LPJ_T0023442.1 MGP_LPJ_G0016689.1 mouse_genomes_project 1 178838209 178863235 + MGP_LPJ_P0023442 Slamf6 protein_coding protein_coding MGP_LPJ_T0023443.1 MGP_LPJ_G0016689.1 mouse_genomes_project 1 178838354 178839351 + Slamf6 protein_coding retained_intron MGP_LPJ_T0023444.1 MGP_LPJ_G0016689.1 mouse_genomes_project 1 178838380 178867469 + MGP_LPJ_P0023444 Slamf6 protein_coding protein_coding MGP_LPJ_T0023445.1 MGP_LPJ_G0016689.1 mouse_genomes_project 1 178840162 178853569 + MGP_LPJ_P0023445 Slamf6 protein_coding protein_coding MGP_LPJ_T0023446.1 MGP_LPJ_G0016689.1 mouse_genomes_project 1 178850986 178853906 + Slamf6 protein_coding retained_intron MGP_LPJ_T0023447.1 MGP_LPJ_G0016689.1 mouse_genomes_project 1 178861951 178868264 + Slamf6 protein_coding processed_transcript MGP_LPJ_T0021695.1 MGP_LPJ_G0016327.1 mouse_genomes_project 1 124763980 124770535 + MGP_LPJ_P0021695 En1 protein_coding protein_coding MGP_LPJ_T0005823.1 MGP_LPJ_G0004883.1 mouse_genomes_project 1 79780999 79812348 - Gm28387 lincRNA lincRNA MGP_LPJ_T0020799.1 MGP_LPJ_G0016129.1 mouse_genomes_project 1 84271278 84334134 - MGP_LPJ_P0020799 Irs1 protein_coding protein_coding MGP_LPJ_T0012070.1 MGP_LPJ_G0010161.1 mouse_genomes_project 1 63671706 63673414 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012078.1 MGP_LPJ_G0010169.1 mouse_genomes_project 1 65523026 65523244 - processed_pseudogene processed_pseudogene MGP_LPJ_T0021204.1 MGP_LPJ_G0016218.1 mouse_genomes_project 1 93873802 93900752 + MGP_LPJ_P0021204 Ramp1 protein_coding protein_coding MGP_LPJ_T0021205.1 MGP_LPJ_G0016218.1 mouse_genomes_project 1 93874022 93900752 + MGP_LPJ_P0021205 Ramp1 protein_coding protein_coding MGP_LPJ_T0021206.1 MGP_LPJ_G0016218.1 mouse_genomes_project 1 93874026 93918749 + MGP_LPJ_P0021206 Ramp1 protein_coding protein_coding MGP_LPJ_T0009538.1 MGP_LPJ_G0007656.1 mouse_genomes_project 1 101619935 101620045 + Gm26134 miRNA miRNA MGP_LPJ_T0019309.1 MGP_LPJ_G0015850.1 mouse_genomes_project 1 36260752 36310476 + Inpp4a protein_coding processed_transcript MGP_LPJ_T0019310.1 MGP_LPJ_G0015850.1 mouse_genomes_project 1 36260778 36373413 + MGP_LPJ_P0019310 Inpp4a protein_coding protein_coding MGP_LPJ_T0019311.1 MGP_LPJ_G0015850.1 mouse_genomes_project 1 36260780 36263654 + Inpp4a protein_coding retained_intron MGP_LPJ_T0019312.1 MGP_LPJ_G0015850.1 mouse_genomes_project 1 36260802 36362220 + MGP_LPJ_P0019312 Inpp4a protein_coding protein_coding MGP_LPJ_T0019313.1 MGP_LPJ_G0015850.1 mouse_genomes_project 1 36261195 36371394 + MGP_LPJ_P0019313 Inpp4a protein_coding protein_coding MGP_LPJ_T0019314.1 MGP_LPJ_G0015850.1 mouse_genomes_project 1 36261195 36370950 + MGP_LPJ_P0019314 Inpp4a protein_coding protein_coding MGP_LPJ_T0019315.1 MGP_LPJ_G0015850.1 mouse_genomes_project 1 36319446 36371130 + MGP_LPJ_P0019315 Inpp4a protein_coding protein_coding MGP_LPJ_T0019316.1 MGP_LPJ_G0015850.1 mouse_genomes_project 1 36319446 36366351 + MGP_LPJ_P0019316 Inpp4a protein_coding protein_coding MGP_LPJ_T0019317.1 MGP_LPJ_G0015850.1 mouse_genomes_project 1 36319968 36370920 + MGP_LPJ_P0019317 Inpp4a protein_coding protein_coding MGP_LPJ_T0019318.1 MGP_LPJ_G0015850.1 mouse_genomes_project 1 36331230 36367103 + MGP_LPJ_P0019318 Inpp4a protein_coding protein_coding MGP_LPJ_T0019319.1 MGP_LPJ_G0015850.1 mouse_genomes_project 1 36331230 36367095 + MGP_LPJ_P0019319 Inpp4a protein_coding protein_coding MGP_LPJ_T0019320.1 MGP_LPJ_G0015850.1 mouse_genomes_project 1 36331234 36367100 + MGP_LPJ_P0019320 Inpp4a protein_coding protein_coding MGP_LPJ_T0019321.1 MGP_LPJ_G0015850.1 mouse_genomes_project 1 36340430 36342834 + Inpp4a protein_coding retained_intron MGP_LPJ_T0005835.1 MGP_LPJ_G0004893.1 mouse_genomes_project 1 85749825 86005906 - 4933436I20Rik lincRNA lincRNA MGP_LPJ_T0005836.1 MGP_LPJ_G0004893.1 mouse_genomes_project 1 85936614 86005947 - 4933436I20Rik lincRNA lincRNA MGP_LPJ_T0000652.1 MGP_LPJ_G0000587.1 mouse_genomes_project 1 133937387 133939874 + TEC TEC MGP_LPJ_T0000661.1 MGP_LPJ_G0000596.1 mouse_genomes_project 1 135812305 135818136 - TEC TEC MGP_LPJ_T0012153.1 MGP_LPJ_G0010244.1 mouse_genomes_project 1 102939258 102939855 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098744.1 MGP_LPJ_G0037007.1 mouse_genomes_project 1 58178608 58178765 + Gm24014 snRNA snRNA MGP_LPJ_T0023713.1 MGP_LPJ_G0016772.1 mouse_genomes_project 1 186114959 186308019 + Kif26b protein_coding retained_intron MGP_LPJ_T0023714.1 MGP_LPJ_G0016772.1 mouse_genomes_project 1 186114959 186544743 + MGP_LPJ_P0023714 Kif26b protein_coding protein_coding MGP_LPJ_T0023715.1 MGP_LPJ_G0016772.1 mouse_genomes_project 1 186395470 186538399 + MGP_LPJ_P0023715 Kif26b protein_coding protein_coding MGP_LPJ_T0012345.1 MGP_LPJ_G0010436.1 mouse_genomes_project 1 188428894 188429372 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005871.1 MGP_LPJ_G0004926.1 mouse_genomes_project 1 99539678 99554224 - Gm29601 lincRNA lincRNA MGP_LPJ_T0002880.1 MGP_LPJ_G0002722.1 mouse_genomes_project 1 95629502 95636209 - Gm29480 antisense antisense MGP_LPJ_T0000695.1 MGP_LPJ_G0000628.1 mouse_genomes_project 1 144178286 144181145 + TEC TEC MGP_LPJ_T0002938.1 MGP_LPJ_G0002764.1 mouse_genomes_project 1 159656400 159658610 - Gm29529 antisense antisense MGP_LPJ_T0002939.1 MGP_LPJ_G0002765.1 mouse_genomes_project 1 159711880 159717659 - Gm28513 antisense antisense MGP_LPJ_T0021765.1 MGP_LPJ_G0016341.1 mouse_genomes_project 1 132346332 132365765 + Ccnt2 protein_coding retained_intron MGP_LPJ_T0021766.1 MGP_LPJ_G0016341.1 mouse_genomes_project 1 132346332 132367976 + Ccnt2 protein_coding retained_intron MGP_LPJ_T0021767.1 MGP_LPJ_G0016341.1 mouse_genomes_project 1 132346332 132367976 + Ccnt2 protein_coding retained_intron MGP_LPJ_T0021768.1 MGP_LPJ_G0016341.1 mouse_genomes_project 1 132346332 132370607 + Ccnt2 protein_coding retained_intron MGP_LPJ_T0021769.1 MGP_LPJ_G0016341.1 mouse_genomes_project 1 132346332 132381104 + MGP_LPJ_P0021769 Ccnt2 protein_coding protein_coding MGP_LPJ_T0021770.1 MGP_LPJ_G0016341.1 mouse_genomes_project 1 132346332 132378128 + MGP_LPJ_P0021770 Ccnt2 protein_coding protein_coding MGP_LPJ_T0021771.1 MGP_LPJ_G0016341.1 mouse_genomes_project 1 132368746 132381104 + Ccnt2 protein_coding processed_transcript MGP_LPJ_T0011278.1 MGP_LPJ_G0009396.1 mouse_genomes_project 1 199402685 199402793 + Gm24748 misc_RNA misc_RNA MGP_LPJ_T0021373.1 MGP_LPJ_G0016256.1 mouse_genomes_project 1 96139522 96171115 + MGP_LPJ_P0021373 Ppp1r7 protein_coding protein_coding MGP_LPJ_T0021374.1 MGP_LPJ_G0016256.1 mouse_genomes_project 1 96140323 96149300 + MGP_LPJ_P0021374 Ppp1r7 protein_coding protein_coding MGP_LPJ_T0021375.1 MGP_LPJ_G0016256.1 mouse_genomes_project 1 96140375 96149231 + MGP_LPJ_P0021375 Ppp1r7 protein_coding nonsense_mediated_decay MGP_LPJ_T0100000.1 MGP_LPJ_G0038263.1 mouse_genomes_project 1 97987478 97987588 - Gm23181 snoRNA snoRNA MGP_LPJ_T0019541.1 MGP_LPJ_G0015898.1 mouse_genomes_project 1 43364353 43374952 - MGP_LPJ_P0019541 Mettl21c protein_coding protein_coding MGP_LPJ_T0019542.1 MGP_LPJ_G0015898.1 mouse_genomes_project 1 43364880 43372414 - Mettl21c protein_coding processed_transcript MGP_LPJ_T0019543.1 MGP_LPJ_G0015898.1 mouse_genomes_project 1 43365455 43374980 - Mettl21c protein_coding retained_intron MGP_LPJ_T0022630.1 MGP_LPJ_G0016522.1 mouse_genomes_project 1 159876945 159890250 + MGP_LPJ_P0022630 Teddm1b protein_coding protein_coding MGP_LPJ_T0020510.1 MGP_LPJ_G0016083.1 mouse_genomes_project 1 76681566 76687953 - MGP_LPJ_P0020510 Ihh protein_coding protein_coding MGP_LPJ_T0020511.1 MGP_LPJ_G0016083.1 mouse_genomes_project 1 76684004 76687723 - Ihh protein_coding retained_intron MGP_LPJ_T0020172.1 MGP_LPJ_G0016015.1 mouse_genomes_project 1 66101096 66121523 - MGP_LPJ_P0020172 Akr1cl protein_coding protein_coding MGP_LPJ_T0020173.1 MGP_LPJ_G0016015.1 mouse_genomes_project 1 66101096 66121535 - MGP_LPJ_P0020173 Akr1cl protein_coding protein_coding MGP_LPJ_T0020174.1 MGP_LPJ_G0016015.1 mouse_genomes_project 1 66102877 66104951 - Akr1cl protein_coding retained_intron MGP_LPJ_T0020175.1 MGP_LPJ_G0016015.1 mouse_genomes_project 1 66104475 66121462 - MGP_LPJ_P0020175 Akr1cl protein_coding nonsense_mediated_decay MGP_LPJ_T0020176.1 MGP_LPJ_G0016015.1 mouse_genomes_project 1 66116457 66121508 - Akr1cl protein_coding processed_transcript MGP_LPJ_T0020177.1 MGP_LPJ_G0016015.1 mouse_genomes_project 1 66118299 66121524 - Akr1cl protein_coding retained_intron MGP_LPJ_T0005665.1 MGP_LPJ_G0004770.1 mouse_genomes_project 1 4705786 4752122 - Gm26901 lincRNA lincRNA MGP_LPJ_T0005666.1 MGP_LPJ_G0004770.1 mouse_genomes_project 1 4705788 4752196 - Gm26901 lincRNA lincRNA MGP_LPJ_T0005667.1 MGP_LPJ_G0004770.1 mouse_genomes_project 1 4708571 4711257 - Gm26901 lincRNA retained_intron MGP_LPJ_T0022218.1 MGP_LPJ_G0016443.1 mouse_genomes_project 1 140381972 140433246 - MGP_LPJ_P0022218 Ipo9 protein_coding protein_coding MGP_LPJ_T0022219.1 MGP_LPJ_G0016443.1 mouse_genomes_project 1 140384133 140433205 - MGP_LPJ_P0022219 Ipo9 protein_coding nonsense_mediated_decay MGP_LPJ_T0022220.1 MGP_LPJ_G0016443.1 mouse_genomes_project 1 140384133 140433238 - MGP_LPJ_P0022220 Ipo9 protein_coding nonsense_mediated_decay MGP_LPJ_T0022221.1 MGP_LPJ_G0016443.1 mouse_genomes_project 1 140384781 140388255 - MGP_LPJ_P0022221 Ipo9 protein_coding protein_coding MGP_LPJ_T0022222.1 MGP_LPJ_G0016443.1 mouse_genomes_project 1 140385469 140388210 - Ipo9 protein_coding retained_intron MGP_LPJ_T0022223.1 MGP_LPJ_G0016443.1 mouse_genomes_project 1 140385948 140388361 - Ipo9 protein_coding retained_intron MGP_LPJ_T0022224.1 MGP_LPJ_G0016443.1 mouse_genomes_project 1 140386053 140387220 - Ipo9 protein_coding retained_intron MGP_LPJ_T0022225.1 MGP_LPJ_G0016443.1 mouse_genomes_project 1 140388276 140389454 - Ipo9 protein_coding retained_intron MGP_LPJ_T0022226.1 MGP_LPJ_G0016443.1 mouse_genomes_project 1 140389097 140404652 - Ipo9 protein_coding processed_transcript MGP_LPJ_T0022227.1 MGP_LPJ_G0016443.1 mouse_genomes_project 1 140393808 140404743 - Ipo9 protein_coding retained_intron MGP_LPJ_T0022228.1 MGP_LPJ_G0016443.1 mouse_genomes_project 1 140403635 140433180 - MGP_LPJ_P0022228 Ipo9 protein_coding nonsense_mediated_decay MGP_LPJ_T0022229.1 MGP_LPJ_G0016443.1 mouse_genomes_project 1 140407304 140410094 - Ipo9 protein_coding retained_intron MGP_LPJ_T0022230.1 MGP_LPJ_G0016443.1 mouse_genomes_project 1 140407754 140422789 - Ipo9 protein_coding retained_intron MGP_LPJ_T0022231.1 MGP_LPJ_G0016443.1 mouse_genomes_project 1 140410810 140433166 - MGP_LPJ_P0022231 Ipo9 protein_coding nonsense_mediated_decay MGP_LPJ_T0021721.1 MGP_LPJ_G0016333.1 mouse_genomes_project 1 129821770 129825955 - Actr3 protein_coding retained_intron MGP_LPJ_T0021722.1 MGP_LPJ_G0016333.1 mouse_genomes_project 1 129822176 129864459 - MGP_LPJ_P0021722 Actr3 protein_coding nonsense_mediated_decay MGP_LPJ_T0021723.1 MGP_LPJ_G0016333.1 mouse_genomes_project 1 129822425 129864306 - MGP_LPJ_P0021723 Actr3 protein_coding protein_coding MGP_LPJ_T0021724.1 MGP_LPJ_G0016333.1 mouse_genomes_project 1 129824831 129826659 - Actr3 protein_coding retained_intron MGP_LPJ_T0021725.1 MGP_LPJ_G0016333.1 mouse_genomes_project 1 129834207 129837288 - Actr3 protein_coding retained_intron MGP_LPJ_T0021726.1 MGP_LPJ_G0016333.1 mouse_genomes_project 1 129834226 129864705 - MGP_LPJ_P0021726 Actr3 protein_coding protein_coding MGP_LPJ_T0021727.1 MGP_LPJ_G0016333.1 mouse_genomes_project 1 129834256 129863634 - MGP_LPJ_P0021727 Actr3 protein_coding protein_coding MGP_LPJ_T0021728.1 MGP_LPJ_G0016333.1 mouse_genomes_project 1 129835638 129864432 - MGP_LPJ_P0021728 Actr3 protein_coding protein_coding MGP_LPJ_T0021729.1 MGP_LPJ_G0016333.1 mouse_genomes_project 1 129835695 129864685 - MGP_LPJ_P0021729 Actr3 protein_coding protein_coding MGP_LPJ_T0021730.1 MGP_LPJ_G0016333.1 mouse_genomes_project 1 129835704 129864448 - MGP_LPJ_P0021730 Actr3 protein_coding protein_coding MGP_LPJ_T0021731.1 MGP_LPJ_G0016333.1 mouse_genomes_project 1 129845063 129864406 - Actr3 protein_coding retained_intron MGP_LPJ_T0022387.1 MGP_LPJ_G0016474.1 mouse_genomes_project 1 144704062 144721441 - MGP_LPJ_P0022387 Cfhr1 protein_coding protein_coding MGP_LPJ_T0022391.1 MGP_LPJ_G0016474.1 mouse_genomes_project 1 144711909 144714827 - MGP_LPJ_P0022391 Cfhr1 protein_coding protein_coding MGP_LPJ_T0019456.1 MGP_LPJ_G0015878.1 mouse_genomes_project 1 39191808 39233511 + MGP_LPJ_P0019456 Il1r2 protein_coding protein_coding MGP_LPJ_T0019457.1 MGP_LPJ_G0015878.1 mouse_genomes_project 1 39203088 39248543 + MGP_LPJ_P0019457 Il1r2 protein_coding protein_coding MGP_LPJ_T0019458.1 MGP_LPJ_G0015878.1 mouse_genomes_project 1 39203182 39248531 + MGP_LPJ_P0019458 Il1r2 protein_coding nonsense_mediated_decay MGP_LPJ_T0019459.1 MGP_LPJ_G0015878.1 mouse_genomes_project 1 39204373 39223784 + MGP_LPJ_P0019459 Il1r2 protein_coding protein_coding MGP_LPJ_T0009495.1 MGP_LPJ_G0007613.1 mouse_genomes_project 1 33158664 33158743 - Mir5103 miRNA miRNA MGP_LPJ_T0012021.1 MGP_LPJ_G0010112.1 mouse_genomes_project 1 48977910 48978125 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005928.1 MGP_LPJ_G0004971.1 mouse_genomes_project 1 138868575 138881493 + Gm1627 lincRNA lincRNA MGP_LPJ_T0022275.1 MGP_LPJ_G0016451.1 mouse_genomes_project 1 140976002 140985537 - MGP_LPJ_P0022275 Igfn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0022276.1 MGP_LPJ_G0016451.1 mouse_genomes_project 1 140976009 141030564 - MGP_LPJ_P0022276 Igfn1 protein_coding protein_coding MGP_LPJ_T0022277.1 MGP_LPJ_G0016451.1 mouse_genomes_project 1 140977022 141006765 - MGP_LPJ_P0022277 Igfn1 protein_coding protein_coding MGP_LPJ_T0101224.1 MGP_LPJ_G0039482.1 mouse_genomes_project 1 80867086 80867449 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0101225.1 MGP_LPJ_G0039482.1 mouse_genomes_project 1 80867300 80867449 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0023930.1 MGP_LPJ_G0016815.1 mouse_genomes_project 1 190815545 190837465 + MGP_LPJ_P0023930 Tlr5 protein_coding protein_coding MGP_LPJ_T0023931.1 MGP_LPJ_G0016815.1 mouse_genomes_project 1 190815545 190837818 + MGP_LPJ_P0023931 Tlr5 protein_coding protein_coding MGP_LPJ_T0023932.1 MGP_LPJ_G0016815.1 mouse_genomes_project 1 190815579 190830972 + Tlr5 protein_coding processed_transcript MGP_LPJ_T0023933.1 MGP_LPJ_G0016815.1 mouse_genomes_project 1 190815585 190830736 + Tlr5 protein_coding processed_transcript MGP_LPJ_T0023934.1 MGP_LPJ_G0016815.1 mouse_genomes_project 1 190833949 190837773 + MGP_LPJ_P0023934 Tlr5 protein_coding protein_coding MGP_LPJ_T0012185.1 MGP_LPJ_G0010276.1 mouse_genomes_project 1 114010507 114011045 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009556.1 MGP_LPJ_G0007674.1 mouse_genomes_project 1 161385223 161385347 + Gm22569 miRNA miRNA MGP_LPJ_T0098781.1 MGP_LPJ_G0037044.1 mouse_genomes_project 1 136871712 136871828 + Gm26034 snRNA snRNA MGP_LPJ_T0020768.1 MGP_LPJ_G0016123.1 mouse_genomes_project 1 81738369 81806489 - MGP_LPJ_P0020768 Serpine2 protein_coding protein_coding MGP_LPJ_T0020769.1 MGP_LPJ_G0016123.1 mouse_genomes_project 1 81740966 81766650 - MGP_LPJ_P0020769 Serpine2 protein_coding protein_coding MGP_LPJ_T0020770.1 MGP_LPJ_G0016123.1 mouse_genomes_project 1 81747210 81808982 - MGP_LPJ_P0020770 Serpine2 protein_coding protein_coding MGP_LPJ_T0020771.1 MGP_LPJ_G0016123.1 mouse_genomes_project 1 81760183 81806489 - Serpine2 protein_coding retained_intron MGP_LPJ_T0020772.1 MGP_LPJ_G0016123.1 mouse_genomes_project 1 81761983 81765632 - Serpine2 protein_coding retained_intron MGP_LPJ_T0020773.1 MGP_LPJ_G0016123.1 mouse_genomes_project 1 81804211 81805343 - Serpine2 protein_coding retained_intron MGP_LPJ_T0022388.1 MGP_LPJ_G0016475.1 mouse_genomes_project 1 144704067 145038211 - MGP_LPJ_P0022388 Gm4788 protein_coding protein_coding MGP_LPJ_T0022389.1 MGP_LPJ_G0016475.1 mouse_genomes_project 1 144704067 145038286 - MGP_LPJ_P0022389 Gm4788 protein_coding protein_coding MGP_LPJ_T0022390.1 MGP_LPJ_G0016475.1 mouse_genomes_project 1 144704076 145038279 - MGP_LPJ_P0022390 Gm4788 protein_coding protein_coding MGP_LPJ_T0012045.1 MGP_LPJ_G0010136.1 mouse_genomes_project 1 55938593 55938941 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009487.1 MGP_LPJ_G0007605.1 mouse_genomes_project 1 18526208 18526327 + Mir133b miRNA miRNA MGP_LPJ_T0012148.1 MGP_LPJ_G0010239.1 mouse_genomes_project 1 100016482 100017446 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005957.1 MGP_LPJ_G0004994.1 mouse_genomes_project 1 156708376 156711908 + Gm29188 lincRNA lincRNA MGP_LPJ_T0005933.1 MGP_LPJ_G0004976.1 mouse_genomes_project 1 141287862 141291045 - Gm37552 lincRNA lincRNA MGP_LPJ_T0011862.1 MGP_LPJ_G0009953.1 mouse_genomes_project 1 1749687 1750137 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006056.1 MGP_LPJ_G0005069.1 mouse_genomes_project 1 192946868 192950874 - Gm34732 lincRNA lincRNA MGP_LPJ_T0020069.1 MGP_LPJ_G0015994.1 mouse_genomes_project 1 61675562 61717760 + Cd28 protein_coding processed_transcript MGP_LPJ_T0020070.1 MGP_LPJ_G0015994.1 mouse_genomes_project 1 61700972 61727867 + MGP_LPJ_P0020070 Cd28 protein_coding protein_coding MGP_LPJ_T0020071.1 MGP_LPJ_G0015994.1 mouse_genomes_project 1 61701016 61719223 + Cd28 protein_coding retained_intron MGP_LPJ_T0000501.1 MGP_LPJ_G0000436.1 mouse_genomes_project 1 47186204 47188146 - TEC TEC MGP_LPJ_T0011917.1 MGP_LPJ_G0010008.1 mouse_genomes_project 1 16046418 16047406 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005761.1 MGP_LPJ_G0004837.1 mouse_genomes_project 1 57823977 57826038 + 1700126A01Rik lincRNA lincRNA MGP_LPJ_T0020517.1 MGP_LPJ_G0016086.1 mouse_genomes_project 1 76819301 76827384 - MGP_LPJ_P0020517 Cnppd1 protein_coding protein_coding MGP_LPJ_T0020518.1 MGP_LPJ_G0016086.1 mouse_genomes_project 1 76820515 76826435 - MGP_LPJ_P0020518 Cnppd1 protein_coding protein_coding MGP_LPJ_T0020519.1 MGP_LPJ_G0016086.1 mouse_genomes_project 1 76820518 76823620 - Cnppd1 protein_coding retained_intron MGP_LPJ_T0020520.1 MGP_LPJ_G0016086.1 mouse_genomes_project 1 76820518 76827443 - MGP_LPJ_P0020520 Cnppd1 protein_coding protein_coding MGP_LPJ_T0020521.1 MGP_LPJ_G0016086.1 mouse_genomes_project 1 76821532 76822609 - Cnppd1 protein_coding retained_intron MGP_LPJ_T0020522.1 MGP_LPJ_G0016086.1 mouse_genomes_project 1 76821839 76822554 - Cnppd1 protein_coding retained_intron MGP_LPJ_T0020523.1 MGP_LPJ_G0016086.1 mouse_genomes_project 1 76824090 76826547 - MGP_LPJ_P0020523 Cnppd1 protein_coding protein_coding MGP_LPJ_T0020524.1 MGP_LPJ_G0016086.1 mouse_genomes_project 1 76824340 76827457 - MGP_LPJ_P0020524 Cnppd1 protein_coding protein_coding MGP_LPJ_T0000603.1 MGP_LPJ_G0000538.1 mouse_genomes_project 1 94753926 94756432 - TEC TEC MGP_LPJ_T0023564.1 MGP_LPJ_G0016722.1 mouse_genomes_project 1 180337624 180372056 - MGP_LPJ_P0023564 Cadm3 protein_coding protein_coding MGP_LPJ_T0023565.1 MGP_LPJ_G0016722.1 mouse_genomes_project 1 180340364 180372046 - MGP_LPJ_P0023565 Cadm3 protein_coding protein_coding MGP_LPJ_T0023566.1 MGP_LPJ_G0016722.1 mouse_genomes_project 1 180341216 180346311 - Cadm3 protein_coding retained_intron MGP_LPJ_T0023567.1 MGP_LPJ_G0016722.1 mouse_genomes_project 1 180346871 180372009 - Cadm3 protein_coding retained_intron MGP_LPJ_T0023568.1 MGP_LPJ_G0016722.1 mouse_genomes_project 1 180349267 180371994 - Cadm3 protein_coding retained_intron MGP_LPJ_T0012356.1 MGP_LPJ_G0010447.1 mouse_genomes_project 1 191479809 191480160 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000448.1 MGP_LPJ_G0000384.1 mouse_genomes_project 1 23719748 23722690 - TEC TEC MGP_LPJ_T0098093.1 MGP_LPJ_G0036374.1 mouse_genomes_project 1 144021742 144021858 - n-R5s217 rRNA rRNA MGP_LPJ_T0011868.1 MGP_LPJ_G0009959.1 mouse_genomes_project 1 2154666 2154938 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002911.1 MGP_LPJ_G0002744.1 mouse_genomes_project 1 137537830 137541302 + Gm10538 antisense antisense MGP_LPJ_T0098391.1 MGP_LPJ_G0036672.1 mouse_genomes_project 1 131885479 131885608 + Gm23370 scaRNA scaRNA MGP_LPJ_T0023569.1 MGP_LPJ_G0016723.1 mouse_genomes_project 1 180355253 180477955 + MGP_LPJ_P0023569 Aim2 protein_coding protein_coding MGP_LPJ_T0023570.1 MGP_LPJ_G0016723.1 mouse_genomes_project 1 180430151 180438708 + Aim2 protein_coding processed_transcript MGP_LPJ_T0023571.1 MGP_LPJ_G0016723.1 mouse_genomes_project 1 180431555 180471320 + MGP_LPJ_P0023571 Aim2 protein_coding protein_coding MGP_LPJ_T0023572.1 MGP_LPJ_G0016723.1 mouse_genomes_project 1 180466585 180467210 + MGP_LPJ_P0023572 Aim2 protein_coding protein_coding MGP_LPJ_T0023573.1 MGP_LPJ_G0016723.1 mouse_genomes_project 1 180466968 180473515 + Aim2 protein_coding processed_transcript MGP_LPJ_T0023574.1 MGP_LPJ_G0016723.1 mouse_genomes_project 1 180466968 180477947 + MGP_LPJ_P0023574 Aim2 protein_coding protein_coding MGP_LPJ_T0023575.1 MGP_LPJ_G0016723.1 mouse_genomes_project 1 180467102 180467780 + Aim2 protein_coding processed_transcript MGP_LPJ_T0005760.1 MGP_LPJ_G0004836.1 mouse_genomes_project 1 57173114 57175167 + Gm28240 lincRNA lincRNA MGP_LPJ_T0020804.1 MGP_LPJ_G0016132.1 mouse_genomes_project 1 84486870 84620736 - MGP_LPJ_P0020804 Col4a4 protein_coding protein_coding MGP_LPJ_T0020805.1 MGP_LPJ_G0016132.1 mouse_genomes_project 1 84492688 84604710 - MGP_LPJ_P0020805 Col4a4 protein_coding unknown_likely_coding MGP_LPJ_T0020806.1 MGP_LPJ_G0016132.1 mouse_genomes_project 1 84576034 84620679 - Col4a4 protein_coding retained_intron MGP_LPJ_T0018992.1 MGP_LPJ_G0015789.1 mouse_genomes_project 1 18805985 18809851 + Efhc1 protein_coding processed_transcript MGP_LPJ_T0018993.1 MGP_LPJ_G0015789.1 mouse_genomes_project 1 18806047 18858557 + MGP_LPJ_P0018993 Efhc1 protein_coding protein_coding MGP_LPJ_T0098080.1 MGP_LPJ_G0036361.1 mouse_genomes_project 1 29632921 29633059 - Gm27362 rRNA rRNA MGP_LPJ_T0000454.1 MGP_LPJ_G0000390.1 mouse_genomes_project 1 23887759 23892305 - TEC TEC MGP_LPJ_T0000816.1 MGP_LPJ_G0000747.1 mouse_genomes_project 1 194102830 194103318 + TEC TEC MGP_LPJ_T0022530.1 MGP_LPJ_G0016501.1 mouse_genomes_project 1 157373860 157454535 + MGP_LPJ_P0022530 Fam129a protein_coding protein_coding MGP_LPJ_T0022531.1 MGP_LPJ_G0016501.1 mouse_genomes_project 1 157374047 157543430 + MGP_LPJ_P0022531 Fam129a protein_coding protein_coding MGP_LPJ_T0022532.1 MGP_LPJ_G0016501.1 mouse_genomes_project 1 157374126 157540806 + MGP_LPJ_P0022532 Fam129a protein_coding nonsense_mediated_decay MGP_LPJ_T0022533.1 MGP_LPJ_G0016501.1 mouse_genomes_project 1 157374170 157508348 + MGP_LPJ_P0022533 Fam129a protein_coding protein_coding MGP_LPJ_T0022534.1 MGP_LPJ_G0016501.1 mouse_genomes_project 1 157492566 157540806 + Fam129a protein_coding processed_transcript MGP_LPJ_T0019625.1 MGP_LPJ_G0015916.1 mouse_genomes_project 1 51259600 51273144 + MGP_LPJ_P0019625 Sdpr protein_coding protein_coding MGP_LPJ_T0000525.1 MGP_LPJ_G0000460.1 mouse_genomes_project 1 62508352 62508634 + TEC TEC MGP_LPJ_T0006077.1 MGP_LPJ_G0005087.1 mouse_genomes_project 1 199475958 199500178 + Gm37168 lincRNA lincRNA MGP_LPJ_T0000419.1 MGP_LPJ_G0000357.1 mouse_genomes_project 1 10914581 10916831 - TEC TEC MGP_LPJ_T0000459.1 MGP_LPJ_G0000395.1 mouse_genomes_project 1 23946469 23947691 + TEC TEC MGP_LPJ_T0000397.1 MGP_LPJ_G0000335.1 mouse_genomes_project 1 3087126 3088921 - TEC TEC MGP_LPJ_T0005839.1 MGP_LPJ_G0004896.1 mouse_genomes_project 1 89497207 89497970 + lincRNA lincRNA MGP_LPJ_T0005952.1 MGP_LPJ_G0004990.1 mouse_genomes_project 1 144574002 144581428 + Gm34816 lincRNA lincRNA MGP_LPJ_T0018943.1 MGP_LPJ_G0015773.1 mouse_genomes_project 1 14384860 14398607 + MGP_LPJ_P0018943 Tmem70 protein_coding protein_coding MGP_LPJ_T0018944.1 MGP_LPJ_G0015773.1 mouse_genomes_project 1 14384863 14397627 + Tmem70 protein_coding processed_transcript MGP_LPJ_T0018945.1 MGP_LPJ_G0015773.1 mouse_genomes_project 1 14384863 14398687 + MGP_LPJ_P0018945 Tmem70 protein_coding protein_coding MGP_LPJ_T0018946.1 MGP_LPJ_G0015773.1 mouse_genomes_project 1 14384889 14385465 + Tmem70 protein_coding processed_transcript MGP_LPJ_T0023583.1 MGP_LPJ_G0016730.1 mouse_genomes_project 1 180790251 180966501 - MGP_LPJ_P0023583 Ifi204 protein_coding protein_coding MGP_LPJ_T0012164.1 MGP_LPJ_G0010255.1 mouse_genomes_project 1 107636299 107636606 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000647.1 MGP_LPJ_G0000582.1 mouse_genomes_project 1 132548960 132554946 - TEC TEC MGP_LPJ_T0000673.1 MGP_LPJ_G0000607.1 mouse_genomes_project 1 139764551 139766642 - TEC TEC MGP_LPJ_T0012284.1 MGP_LPJ_G0010375.1 mouse_genomes_project 1 156861398 156862718 + processed_pseudogene processed_pseudogene MGP_LPJ_T0022422.1 MGP_LPJ_G0016483.1 mouse_genomes_project 1 149148813 149182359 + MGP_LPJ_P0022422 Uchl5 protein_coding protein_coding MGP_LPJ_T0022423.1 MGP_LPJ_G0016483.1 mouse_genomes_project 1 149148817 149155784 + Uchl5 protein_coding retained_intron MGP_LPJ_T0022424.1 MGP_LPJ_G0016483.1 mouse_genomes_project 1 149148822 149182520 + MGP_LPJ_P0022424 Uchl5 protein_coding protein_coding MGP_LPJ_T0022425.1 MGP_LPJ_G0016483.1 mouse_genomes_project 1 149148846 149157566 + Uchl5 protein_coding retained_intron MGP_LPJ_T0022426.1 MGP_LPJ_G0016483.1 mouse_genomes_project 1 149148862 149173468 + MGP_LPJ_P0022426 Uchl5 protein_coding protein_coding MGP_LPJ_T0022427.1 MGP_LPJ_G0016483.1 mouse_genomes_project 1 149155166 149167302 + Uchl5 protein_coding retained_intron MGP_LPJ_T0022428.1 MGP_LPJ_G0016483.1 mouse_genomes_project 1 149167240 149181995 + MGP_LPJ_P0022428 Uchl5 protein_coding nonsense_mediated_decay MGP_LPJ_T0019254.1 MGP_LPJ_G0015842.1 mouse_genomes_project 1 35454778 35464489 - MGP_LPJ_P0019254 Sema4c protein_coding protein_coding MGP_LPJ_T0019255.1 MGP_LPJ_G0015842.1 mouse_genomes_project 1 35454781 35464489 - MGP_LPJ_P0019255 Sema4c protein_coding protein_coding MGP_LPJ_T0019256.1 MGP_LPJ_G0015842.1 mouse_genomes_project 1 35454781 35463666 - MGP_LPJ_P0019256 Sema4c protein_coding protein_coding MGP_LPJ_T0019257.1 MGP_LPJ_G0015842.1 mouse_genomes_project 1 35454781 35463697 - MGP_LPJ_P0019257 Sema4c protein_coding protein_coding MGP_LPJ_T0019258.1 MGP_LPJ_G0015842.1 mouse_genomes_project 1 35457865 35459034 - Sema4c protein_coding retained_intron MGP_LPJ_T0019259.1 MGP_LPJ_G0015842.1 mouse_genomes_project 1 35459363 35460370 - Sema4c protein_coding retained_intron MGP_LPJ_T0019260.1 MGP_LPJ_G0015842.1 mouse_genomes_project 1 35460539 35463674 - MGP_LPJ_P0019260 Sema4c protein_coding protein_coding MGP_LPJ_T0019261.1 MGP_LPJ_G0015842.1 mouse_genomes_project 1 35462071 35464390 - MGP_LPJ_P0019261 Sema4c protein_coding protein_coding MGP_LPJ_T0020256.1 MGP_LPJ_G0016032.1 mouse_genomes_project 1 68151147 68173979 - MGP_LPJ_P0020256 Myl1 protein_coding protein_coding MGP_LPJ_T0020257.1 MGP_LPJ_G0016032.1 mouse_genomes_project 1 68151147 68162768 - MGP_LPJ_P0020257 Myl1 protein_coding protein_coding MGP_LPJ_T0020258.1 MGP_LPJ_G0016032.1 mouse_genomes_project 1 68151149 68162485 - MGP_LPJ_P0020258 Myl1 protein_coding protein_coding MGP_LPJ_T0020259.1 MGP_LPJ_G0016032.1 mouse_genomes_project 1 68151860 68162481 - Myl1 protein_coding processed_transcript MGP_LPJ_T0020260.1 MGP_LPJ_G0016032.1 mouse_genomes_project 1 68152905 68162464 - MGP_LPJ_P0020260 Myl1 protein_coding protein_coding MGP_LPJ_T0020261.1 MGP_LPJ_G0016032.1 mouse_genomes_project 1 68153499 68174219 - MGP_LPJ_P0020261 Myl1 protein_coding protein_coding MGP_LPJ_T0020262.1 MGP_LPJ_G0016032.1 mouse_genomes_project 1 68157288 68161821 - Myl1 protein_coding retained_intron MGP_LPJ_T0020263.1 MGP_LPJ_G0016032.1 mouse_genomes_project 1 68173298 68174239 - Myl1 protein_coding retained_intron MGP_LPJ_T0018902.1 MGP_LPJ_G0015768.1 mouse_genomes_project 1 13782393 13783181 - Rpl7 protein_coding processed_transcript MGP_LPJ_T0018903.1 MGP_LPJ_G0015768.1 mouse_genomes_project 1 13782393 13787652 - MGP_LPJ_P0018903 Rpl7 protein_coding protein_coding MGP_LPJ_T0018904.1 MGP_LPJ_G0015768.1 mouse_genomes_project 1 13782395 13787372 - MGP_LPJ_P0018904 Rpl7 protein_coding unknown_likely_coding MGP_LPJ_T0018905.1 MGP_LPJ_G0015768.1 mouse_genomes_project 1 13782404 13787396 - Rpl7 protein_coding retained_intron MGP_LPJ_T0018906.1 MGP_LPJ_G0015768.1 mouse_genomes_project 1 13782626 13783947 - Rpl7 protein_coding retained_intron MGP_LPJ_T0018907.1 MGP_LPJ_G0015768.1 mouse_genomes_project 1 13782878 13787221 - MGP_LPJ_P0018907 Rpl7 protein_coding protein_coding MGP_LPJ_T0018908.1 MGP_LPJ_G0015768.1 mouse_genomes_project 1 13783589 13787378 - Rpl7 protein_coding retained_intron MGP_LPJ_T0021160.1 MGP_LPJ_G0016210.1 mouse_genomes_project 1 92822192 92834954 + MGP_LPJ_P0021160 Ackr3 protein_coding protein_coding MGP_LPJ_T0021161.1 MGP_LPJ_G0016210.1 mouse_genomes_project 1 92822218 92832047 + MGP_LPJ_P0021161 Ackr3 protein_coding protein_coding MGP_LPJ_T0005849.1 MGP_LPJ_G0004905.1 mouse_genomes_project 1 91884470 91940909 - Gm28342 lincRNA lincRNA MGP_LPJ_T0098786.1 MGP_LPJ_G0037049.1 mouse_genomes_project 1 142313603 142313707 - Gm25609 snRNA snRNA MGP_LPJ_T0098774.1 MGP_LPJ_G0037037.1 mouse_genomes_project 1 123619670 123619774 + Gm25322 snRNA snRNA MGP_LPJ_T0101674.1 MGP_LPJ_G0039712.1 mouse_genomes_project 1 15751238 15757278 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0012374.1 MGP_LPJ_G0010465.1 mouse_genomes_project 1 201314532 201314647 + processed_pseudogene processed_pseudogene MGP_LPJ_T0022738.1 MGP_LPJ_G0016542.1 mouse_genomes_project 1 162487812 162541605 - MGP_LPJ_P0022738 Soat1 protein_coding protein_coding MGP_LPJ_T0022739.1 MGP_LPJ_G0016542.1 mouse_genomes_project 1 162493076 162534395 - MGP_LPJ_P0022739 Soat1 protein_coding protein_coding MGP_LPJ_T0022740.1 MGP_LPJ_G0016542.1 mouse_genomes_project 1 162494009 162495851 - Soat1 protein_coding retained_intron MGP_LPJ_T0022741.1 MGP_LPJ_G0016542.1 mouse_genomes_project 1 162494267 162496297 - Soat1 protein_coding retained_intron MGP_LPJ_T0022742.1 MGP_LPJ_G0016542.1 mouse_genomes_project 1 162504004 162541514 - Soat1 protein_coding retained_intron MGP_LPJ_T0022743.1 MGP_LPJ_G0016542.1 mouse_genomes_project 1 162504430 162541570 - MGP_LPJ_P0022743 Soat1 protein_coding protein_coding MGP_LPJ_T0022744.1 MGP_LPJ_G0016542.1 mouse_genomes_project 1 162511860 162541471 - Soat1 protein_coding retained_intron MGP_LPJ_T0022745.1 MGP_LPJ_G0016542.1 mouse_genomes_project 1 162512093 162541538 - MGP_LPJ_P0022745 Soat1 protein_coding protein_coding MGP_LPJ_T0018980.1 MGP_LPJ_G0015786.1 mouse_genomes_project 1 18626860 18633996 - MGP_LPJ_P0018980 Il17f protein_coding protein_coding MGP_LPJ_T0018981.1 MGP_LPJ_G0015786.1 mouse_genomes_project 1 18627393 18629270 - Il17f protein_coding retained_intron MGP_LPJ_T0018982.1 MGP_LPJ_G0015786.1 mouse_genomes_project 1 18627497 18640798 - MGP_LPJ_P0018982 Il17f protein_coding protein_coding MGP_LPJ_T0000785.1 MGP_LPJ_G0000718.1 mouse_genomes_project 1 184313400 184317365 + TEC TEC MGP_LPJ_T0002970.1 MGP_LPJ_G0002790.1 mouse_genomes_project 1 177842051 177847073 + Gm38204 antisense antisense MGP_LPJ_T0000761.1 MGP_LPJ_G0000694.1 mouse_genomes_project 1 170948008 170950290 + TEC TEC MGP_LPJ_T0012186.1 MGP_LPJ_G0010277.1 mouse_genomes_project 1 114085833 114086761 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002826.1 MGP_LPJ_G0002681.1 mouse_genomes_project 1 51087188 51090130 - Gm28319 antisense antisense MGP_LPJ_T0011957.1 MGP_LPJ_G0010048.1 mouse_genomes_project 1 30254600 30255435 + processed_pseudogene processed_pseudogene MGP_LPJ_T0022693.1 MGP_LPJ_G0016535.1 mouse_genomes_project 1 161936379 162066979 - MGP_LPJ_P0022693 Cep350 protein_coding unknown_likely_coding MGP_LPJ_T0022694.1 MGP_LPJ_G0016535.1 mouse_genomes_project 1 161936385 162067272 - MGP_LPJ_P0022694 Cep350 protein_coding protein_coding MGP_LPJ_T0022695.1 MGP_LPJ_G0016535.1 mouse_genomes_project 1 161939954 161952795 - Cep350 protein_coding processed_transcript MGP_LPJ_T0022696.1 MGP_LPJ_G0016535.1 mouse_genomes_project 1 161954749 161978529 - Cep350 protein_coding processed_transcript MGP_LPJ_T0022697.1 MGP_LPJ_G0016535.1 mouse_genomes_project 1 161960159 161977318 - Cep350 protein_coding processed_transcript MGP_LPJ_T0022698.1 MGP_LPJ_G0016535.1 mouse_genomes_project 1 162029615 162066907 - MGP_LPJ_P0022698 Cep350 protein_coding protein_coding MGP_LPJ_T0022699.1 MGP_LPJ_G0016535.1 mouse_genomes_project 1 162063994 162067201 - Cep350 protein_coding retained_intron MGP_LPJ_T0023529.1 MGP_LPJ_G0016706.1 mouse_genomes_project 1 179454057 179460592 + Tagln2 protein_coding retained_intron MGP_LPJ_T0023530.1 MGP_LPJ_G0016706.1 mouse_genomes_project 1 179454057 179462036 + MGP_LPJ_P0023530 Tagln2 protein_coding protein_coding MGP_LPJ_T0023531.1 MGP_LPJ_G0016706.1 mouse_genomes_project 1 179454255 179460510 + MGP_LPJ_P0023531 Tagln2 protein_coding protein_coding MGP_LPJ_T0023532.1 MGP_LPJ_G0016706.1 mouse_genomes_project 1 179455279 179461411 + MGP_LPJ_P0023532 Tagln2 protein_coding protein_coding MGP_LPJ_T0098761.1 MGP_LPJ_G0037024.1 mouse_genomes_project 1 89653763 89653864 + Gm26187 snRNA snRNA MGP_LPJ_T0019392.1 MGP_LPJ_G0015864.1 mouse_genomes_project 1 37191026 37653375 - MGP_LPJ_P0019392 Aff3 protein_coding unknown_likely_coding MGP_LPJ_T0019393.1 MGP_LPJ_G0015864.1 mouse_genomes_project 1 37191034 37653419 - MGP_LPJ_P0019393 Aff3 protein_coding protein_coding MGP_LPJ_T0019394.1 MGP_LPJ_G0015864.1 mouse_genomes_project 1 37191035 37692531 - MGP_LPJ_P0019394 Aff3 protein_coding protein_coding MGP_LPJ_T0019395.1 MGP_LPJ_G0015864.1 mouse_genomes_project 1 37194970 37211508 - Aff3 protein_coding processed_transcript MGP_LPJ_T0019396.1 MGP_LPJ_G0015864.1 mouse_genomes_project 1 37356534 37692531 - Aff3 protein_coding processed_transcript MGP_LPJ_T0019397.1 MGP_LPJ_G0015864.1 mouse_genomes_project 1 37561490 37692531 - MGP_LPJ_P0019397 Aff3 protein_coding nonsense_mediated_decay MGP_LPJ_T0005927.1 MGP_LPJ_G0004970.1 mouse_genomes_project 1 138729548 138733836 + Gm28441 lincRNA lincRNA MGP_LPJ_T0005900.1 MGP_LPJ_G0004948.1 mouse_genomes_project 1 124017366 124023786 + lincRNA lincRNA MGP_LPJ_T0000624.1 MGP_LPJ_G0000559.1 mouse_genomes_project 1 123724148 123725074 - TEC TEC MGP_LPJ_T0005725.1 MGP_LPJ_G0004817.1 mouse_genomes_project 1 41876258 41985705 - Pantr1 lincRNA lincRNA MGP_LPJ_T0005726.1 MGP_LPJ_G0004817.1 mouse_genomes_project 1 41937416 41984025 - Pantr1 lincRNA lincRNA MGP_LPJ_T0005727.1 MGP_LPJ_G0004817.1 mouse_genomes_project 1 41937422 41955942 - Pantr1 lincRNA lincRNA MGP_LPJ_T0005728.1 MGP_LPJ_G0004817.1 mouse_genomes_project 1 41937423 41985722 - Pantr1 lincRNA lincRNA MGP_LPJ_T0005729.1 MGP_LPJ_G0004817.1 mouse_genomes_project 1 41937423 41984050 - Pantr1 lincRNA lincRNA MGP_LPJ_T0005730.1 MGP_LPJ_G0004817.1 mouse_genomes_project 1 41937423 41985722 - Pantr1 lincRNA lincRNA MGP_LPJ_T0005731.1 MGP_LPJ_G0004817.1 mouse_genomes_project 1 41937423 41940895 - Pantr1 lincRNA lincRNA MGP_LPJ_T0005732.1 MGP_LPJ_G0004817.1 mouse_genomes_project 1 41937424 41956623 - Pantr1 lincRNA lincRNA MGP_LPJ_T0005733.1 MGP_LPJ_G0004817.1 mouse_genomes_project 1 41937424 41983990 - Pantr1 lincRNA lincRNA MGP_LPJ_T0005734.1 MGP_LPJ_G0004817.1 mouse_genomes_project 1 41937601 41955863 - Pantr1 lincRNA lincRNA MGP_LPJ_T0005735.1 MGP_LPJ_G0004817.1 mouse_genomes_project 1 41955802 41985739 - Pantr1 lincRNA lincRNA MGP_LPJ_T0005736.1 MGP_LPJ_G0004817.1 mouse_genomes_project 1 41983923 41985722 - Pantr1 lincRNA lincRNA MGP_LPJ_T0000763.1 MGP_LPJ_G0000696.1 mouse_genomes_project 1 171414363 171417884 - TEC TEC MGP_LPJ_T0023244.1 MGP_LPJ_G0016643.1 mouse_genomes_project 1 176940957 177003576 - MGP_LPJ_P0023244 Uhmk1 protein_coding protein_coding MGP_LPJ_T0023245.1 MGP_LPJ_G0016643.1 mouse_genomes_project 1 176940957 176992971 - MGP_LPJ_P0023245 Uhmk1 protein_coding protein_coding MGP_LPJ_T0023246.1 MGP_LPJ_G0016643.1 mouse_genomes_project 1 176940957 176992971 - MGP_LPJ_P0023246 Uhmk1 protein_coding protein_coding MGP_LPJ_T0023247.1 MGP_LPJ_G0016643.1 mouse_genomes_project 1 176942053 177044851 - MGP_LPJ_P0023247 Uhmk1 protein_coding unknown_likely_coding MGP_LPJ_T0020497.1 MGP_LPJ_G0016077.1 mouse_genomes_project 1 76498722 76512115 + MGP_LPJ_P0020497 Wnt6 protein_coding protein_coding MGP_LPJ_T0020498.1 MGP_LPJ_G0016077.1 mouse_genomes_project 1 76509231 76511395 + Wnt6 protein_coding retained_intron MGP_LPJ_T0019515.1 MGP_LPJ_G0015893.1 mouse_genomes_project 1 42437850 42478906 - MGP_LPJ_P0019515 Fhl2 protein_coding protein_coding MGP_LPJ_T0022089.1 MGP_LPJ_G0016410.1 mouse_genomes_project 1 138538505 138543512 - MGP_LPJ_P0022089 Gm38394 protein_coding protein_coding MGP_LPJ_T0022052.1 MGP_LPJ_G0016403.1 mouse_genomes_project 1 138154136 138173898 + MGP_LPJ_P0022052 protein_coding protein_coding MGP_LPJ_T0022053.1 MGP_LPJ_G0016403.1 mouse_genomes_project 1 138154136 138174105 + MGP_LPJ_P0022053 protein_coding nonsense_mediated_decay MGP_LPJ_T0022055.1 MGP_LPJ_G0016403.1 mouse_genomes_project 1 138166073 138174105 + MGP_LPJ_P0022055 protein_coding protein_coding MGP_LPJ_T0022057.1 MGP_LPJ_G0016403.1 mouse_genomes_project 1 138171415 138173926 + MGP_LPJ_P0022057 protein_coding protein_coding MGP_LPJ_T0009484.1 MGP_LPJ_G0007602.1 mouse_genomes_project 1 10816868 10816950 + Gm27881 miRNA miRNA MGP_LPJ_T0005958.1 MGP_LPJ_G0004995.1 mouse_genomes_project 1 156862965 156867253 + C730036E19Rik lincRNA lincRNA MGP_LPJ_T0021754.1 MGP_LPJ_G0016338.1 mouse_genomes_project 1 131743253 131941805 + Mgat5 protein_coding retained_intron MGP_LPJ_T0021755.1 MGP_LPJ_G0016338.1 mouse_genomes_project 1 131743256 132045588 + MGP_LPJ_P0021755 Mgat5 protein_coding protein_coding MGP_LPJ_T0021756.1 MGP_LPJ_G0016338.1 mouse_genomes_project 1 131743266 131951403 + Mgat5 protein_coding retained_intron MGP_LPJ_T0021757.1 MGP_LPJ_G0016338.1 mouse_genomes_project 1 131858309 132040142 + MGP_LPJ_P0021757 Mgat5 protein_coding protein_coding MGP_LPJ_T0099958.1 MGP_LPJ_G0038221.1 mouse_genomes_project 1 13363130 13363242 - Gm25227 snoRNA snoRNA MGP_LPJ_T0002950.1 MGP_LPJ_G0002776.1 mouse_genomes_project 1 167506477 167511260 - 4930469G21Rik antisense antisense MGP_LPJ_T0002951.1 MGP_LPJ_G0002776.1 mouse_genomes_project 1 167508762 167511260 - 4930469G21Rik antisense antisense MGP_LPJ_T0012049.1 MGP_LPJ_G0010140.1 mouse_genomes_project 1 58274800 58277554 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002920.1 MGP_LPJ_G0002749.1 mouse_genomes_project 1 140087705 140092078 + Gm10535 antisense antisense MGP_LPJ_T0005684.1 MGP_LPJ_G0004783.1 mouse_genomes_project 1 18741944 18743781 - 6720483E21Rik lincRNA lincRNA MGP_LPJ_T0023552.1 MGP_LPJ_G0016714.1 mouse_genomes_project 1 179901107 179902543 + MGP_LPJ_P0023552 Olfr16 protein_coding protein_coding MGP_LPJ_T0021034.1 MGP_LPJ_G0016180.1 mouse_genomes_project 1 89812245 89820597 - MGP_LPJ_P0021034 Kcnj13 protein_coding protein_coding MGP_LPJ_T0021035.1 MGP_LPJ_G0016180.1 mouse_genomes_project 1 89812884 89815272 - MGP_LPJ_P0021035 Kcnj13 protein_coding protein_coding MGP_LPJ_T0020727.1 MGP_LPJ_G0016112.1 mouse_genomes_project 1 80164771 80279070 + MGP_LPJ_P0020727 Sgpp2 protein_coding protein_coding MGP_LPJ_T0022616.1 MGP_LPJ_G0016519.1 mouse_genomes_project 1 159717841 159730119 + MGP_LPJ_P0022616 Rnasel protein_coding protein_coding MGP_LPJ_T0022617.1 MGP_LPJ_G0016519.1 mouse_genomes_project 1 159721321 159730119 + MGP_LPJ_P0022617 Rnasel protein_coding protein_coding MGP_LPJ_T0022618.1 MGP_LPJ_G0016519.1 mouse_genomes_project 1 159721337 159729963 + Rnasel protein_coding retained_intron MGP_LPJ_T0022619.1 MGP_LPJ_G0016519.1 mouse_genomes_project 1 159723101 159731410 + MGP_LPJ_P0022619 Rnasel protein_coding protein_coding MGP_LPJ_T0022620.1 MGP_LPJ_G0016519.1 mouse_genomes_project 1 159725289 159729963 + Rnasel protein_coding processed_transcript MGP_LPJ_T0020390.1 MGP_LPJ_G0016061.1 mouse_genomes_project 1 75975550 75980725 + MGP_LPJ_P0020390 Pnkd protein_coding protein_coding MGP_LPJ_T0020391.1 MGP_LPJ_G0016061.1 mouse_genomes_project 1 75975665 76049566 + MGP_LPJ_P0020391 Pnkd protein_coding protein_coding MGP_LPJ_T0020392.1 MGP_LPJ_G0016061.1 mouse_genomes_project 1 75975670 75979905 + Pnkd protein_coding retained_intron MGP_LPJ_T0020393.1 MGP_LPJ_G0016061.1 mouse_genomes_project 1 75975674 76043456 + Pnkd protein_coding retained_intron MGP_LPJ_T0020394.1 MGP_LPJ_G0016061.1 mouse_genomes_project 1 75975675 76049576 + MGP_LPJ_P0020394 Pnkd protein_coding protein_coding MGP_LPJ_T0020395.1 MGP_LPJ_G0016061.1 mouse_genomes_project 1 75976397 75980544 + Pnkd protein_coding retained_intron MGP_LPJ_T0020403.1 MGP_LPJ_G0016061.1 mouse_genomes_project 1 76026642 76049568 + MGP_LPJ_P0020403 Pnkd protein_coding protein_coding MGP_LPJ_T0020404.1 MGP_LPJ_G0016061.1 mouse_genomes_project 1 76026695 76030294 + Pnkd protein_coding retained_intron MGP_LPJ_T0012233.1 MGP_LPJ_G0010324.1 mouse_genomes_project 1 133093869 133094469 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002943.1 MGP_LPJ_G0002769.1 mouse_genomes_project 1 163046811 163047170 + 4930439D14Rik antisense antisense MGP_LPJ_T0012066.1 MGP_LPJ_G0010157.1 mouse_genomes_project 1 62510592 62510982 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021020.1 MGP_LPJ_G0016179.1 mouse_genomes_project 1 89743488 89776145 + Gigyf2 protein_coding processed_transcript MGP_LPJ_T0021021.1 MGP_LPJ_G0016179.1 mouse_genomes_project 1 89743493 89879554 + MGP_LPJ_P0021021 Gigyf2 protein_coding protein_coding MGP_LPJ_T0021022.1 MGP_LPJ_G0016179.1 mouse_genomes_project 1 89743519 89877902 + MGP_LPJ_P0021022 Gigyf2 protein_coding protein_coding MGP_LPJ_T0021023.1 MGP_LPJ_G0016179.1 mouse_genomes_project 1 89743520 89778208 + Gigyf2 protein_coding processed_transcript MGP_LPJ_T0021024.1 MGP_LPJ_G0016179.1 mouse_genomes_project 1 89743523 89850691 + MGP_LPJ_P0021024 Gigyf2 protein_coding protein_coding MGP_LPJ_T0021025.1 MGP_LPJ_G0016179.1 mouse_genomes_project 1 89743536 89745498 + Gigyf2 protein_coding retained_intron MGP_LPJ_T0021026.1 MGP_LPJ_G0016179.1 mouse_genomes_project 1 89743538 89816766 + Gigyf2 protein_coding processed_transcript MGP_LPJ_T0021027.1 MGP_LPJ_G0016179.1 mouse_genomes_project 1 89743556 89859309 + MGP_LPJ_P0021027 Gigyf2 protein_coding protein_coding MGP_LPJ_T0021028.1 MGP_LPJ_G0016179.1 mouse_genomes_project 1 89774129 89877902 + MGP_LPJ_P0021028 Gigyf2 protein_coding protein_coding MGP_LPJ_T0021029.1 MGP_LPJ_G0016179.1 mouse_genomes_project 1 89774129 89877902 + MGP_LPJ_P0021029 Gigyf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0021030.1 MGP_LPJ_G0016179.1 mouse_genomes_project 1 89784672 89804846 + Gigyf2 protein_coding retained_intron MGP_LPJ_T0021031.1 MGP_LPJ_G0016179.1 mouse_genomes_project 1 89785032 89786527 + Gigyf2 protein_coding retained_intron MGP_LPJ_T0021032.1 MGP_LPJ_G0016179.1 mouse_genomes_project 1 89812199 89832911 + Gigyf2 protein_coding processed_transcript MGP_LPJ_T0021033.1 MGP_LPJ_G0016179.1 mouse_genomes_project 1 89812220 89832642 + MGP_LPJ_P0021033 Gigyf2 protein_coding protein_coding MGP_LPJ_T0021036.1 MGP_LPJ_G0016179.1 mouse_genomes_project 1 89829269 89870783 + MGP_LPJ_P0021036 Gigyf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0021037.1 MGP_LPJ_G0016179.1 mouse_genomes_project 1 89829328 89833300 + MGP_LPJ_P0021037 Gigyf2 protein_coding protein_coding MGP_LPJ_T0021038.1 MGP_LPJ_G0016179.1 mouse_genomes_project 1 89830514 89833210 + MGP_LPJ_P0021038 Gigyf2 protein_coding protein_coding MGP_LPJ_T0021039.1 MGP_LPJ_G0016179.1 mouse_genomes_project 1 89830546 89836301 + MGP_LPJ_P0021039 Gigyf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0021040.1 MGP_LPJ_G0016179.1 mouse_genomes_project 1 89830562 89832965 + MGP_LPJ_P0021040 Gigyf2 protein_coding protein_coding MGP_LPJ_T0021041.1 MGP_LPJ_G0016179.1 mouse_genomes_project 1 89832977 89845942 + MGP_LPJ_P0021041 Gigyf2 protein_coding protein_coding MGP_LPJ_T0021042.1 MGP_LPJ_G0016179.1 mouse_genomes_project 1 89845810 89847373 + Gigyf2 protein_coding retained_intron MGP_LPJ_T0021043.1 MGP_LPJ_G0016179.1 mouse_genomes_project 1 89858629 89879554 + Gigyf2 protein_coding processed_transcript MGP_LPJ_T0021044.1 MGP_LPJ_G0016179.1 mouse_genomes_project 1 89872080 89877965 + Gigyf2 protein_coding retained_intron MGP_LPJ_T0012135.1 MGP_LPJ_G0010226.1 mouse_genomes_project 1 91518110 91519339 + processed_pseudogene processed_pseudogene MGP_LPJ_T0020842.1 MGP_LPJ_G0016139.1 mouse_genomes_project 1 85194778 85197179 + MGP_LPJ_P0020842 Ccl20 protein_coding protein_coding MGP_LPJ_T0020843.1 MGP_LPJ_G0016139.1 mouse_genomes_project 1 85194786 85197180 + MGP_LPJ_P0020843 Ccl20 protein_coding protein_coding MGP_LPJ_T0020844.1 MGP_LPJ_G0016139.1 mouse_genomes_project 1 85194805 85197180 + MGP_LPJ_P0020844 Ccl20 protein_coding protein_coding MGP_LPJ_T0000731.1 MGP_LPJ_G0000664.1 mouse_genomes_project 1 162960346 162962989 - TEC TEC MGP_LPJ_T0002828.1 MGP_LPJ_G0002683.1 mouse_genomes_project 1 53155299 53156882 + Gm28777 antisense antisense MGP_LPJ_T0021867.1 MGP_LPJ_G0016363.1 mouse_genomes_project 1 135596956 135602337 - MGP_LPJ_P0021867 Il24 protein_coding protein_coding MGP_LPJ_T0021868.1 MGP_LPJ_G0016363.1 mouse_genomes_project 1 135596956 135600879 - MGP_LPJ_P0021868 Il24 protein_coding protein_coding MGP_LPJ_T0021869.1 MGP_LPJ_G0016363.1 mouse_genomes_project 1 135597337 135602222 - MGP_LPJ_P0021869 Il24 protein_coding nonsense_mediated_decay MGP_LPJ_T0021870.1 MGP_LPJ_G0016363.1 mouse_genomes_project 1 135599669 135602296 - MGP_LPJ_P0021870 Il24 protein_coding nonsense_mediated_decay MGP_LPJ_T0011867.1 MGP_LPJ_G0009958.1 mouse_genomes_project 1 1984686 1986133 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006024.1 MGP_LPJ_G0005048.1 mouse_genomes_project 1 188204375 188215616 - Gm37267 lincRNA lincRNA MGP_LPJ_T0023314.1 MGP_LPJ_G0016663.1 mouse_genomes_project 1 178118016 178124523 - MGP_LPJ_P0023314 Tomm40l protein_coding protein_coding MGP_LPJ_T0023315.1 MGP_LPJ_G0016663.1 mouse_genomes_project 1 178119808 178124457 - MGP_LPJ_P0023315 Tomm40l protein_coding protein_coding MGP_LPJ_T0023316.1 MGP_LPJ_G0016663.1 mouse_genomes_project 1 178119808 178124193 - MGP_LPJ_P0023316 Tomm40l protein_coding protein_coding MGP_LPJ_T0023317.1 MGP_LPJ_G0016663.1 mouse_genomes_project 1 178120369 178124460 - MGP_LPJ_P0023317 Tomm40l protein_coding nonsense_mediated_decay MGP_LPJ_T0023318.1 MGP_LPJ_G0016663.1 mouse_genomes_project 1 178122834 178124469 - MGP_LPJ_P0023318 Tomm40l protein_coding protein_coding MGP_LPJ_T0023319.1 MGP_LPJ_G0016663.1 mouse_genomes_project 1 178122905 178124453 - MGP_LPJ_P0023319 Tomm40l protein_coding protein_coding MGP_LPJ_T0023320.1 MGP_LPJ_G0016663.1 mouse_genomes_project 1 178123094 178124441 - Tomm40l protein_coding processed_transcript MGP_LPJ_T0023321.1 MGP_LPJ_G0016663.1 mouse_genomes_project 1 178123187 178124505 - Tomm40l protein_coding retained_intron MGP_LPJ_T0020434.1 MGP_LPJ_G0016068.1 mouse_genomes_project 1 76216397 76244137 + MGP_LPJ_P0020434 Cnot9 protein_coding protein_coding MGP_LPJ_T0020435.1 MGP_LPJ_G0016068.1 mouse_genomes_project 1 76216399 76240385 + Cnot9 protein_coding processed_transcript MGP_LPJ_T0020436.1 MGP_LPJ_G0016068.1 mouse_genomes_project 1 76236824 76241472 + Cnot9 protein_coding retained_intron MGP_LPJ_T0000412.1 MGP_LPJ_G0000350.1 mouse_genomes_project 1 9215099 9217224 + TEC TEC MGP_LPJ_T0020492.1 MGP_LPJ_G0016076.1 mouse_genomes_project 1 76463590 76473614 - MGP_LPJ_P0020492 Prkag3 protein_coding nonsense_mediated_decay MGP_LPJ_T0020493.1 MGP_LPJ_G0016076.1 mouse_genomes_project 1 76464877 76473880 - MGP_LPJ_P0020493 Prkag3 protein_coding protein_coding MGP_LPJ_T0020494.1 MGP_LPJ_G0016076.1 mouse_genomes_project 1 76464877 76473236 - MGP_LPJ_P0020494 Prkag3 protein_coding protein_coding MGP_LPJ_T0020495.1 MGP_LPJ_G0016076.1 mouse_genomes_project 1 76466139 76473526 - MGP_LPJ_P0020495 Prkag3 protein_coding nonsense_mediated_decay MGP_LPJ_T0020496.1 MGP_LPJ_G0016076.1 mouse_genomes_project 1 76472176 76473563 - MGP_LPJ_P0020496 Prkag3 protein_coding nonsense_mediated_decay MGP_LPJ_T0021170.1 MGP_LPJ_G0016212.1 mouse_genomes_project 1 93426620 93526428 - MGP_LPJ_P0021170 Col6a3 protein_coding protein_coding MGP_LPJ_T0021171.1 MGP_LPJ_G0016212.1 mouse_genomes_project 1 93426620 93526428 - MGP_LPJ_P0021171 Col6a3 protein_coding protein_coding MGP_LPJ_T0021172.1 MGP_LPJ_G0016212.1 mouse_genomes_project 1 93427583 93526409 - MGP_LPJ_P0021172 Col6a3 protein_coding protein_coding MGP_LPJ_T0021173.1 MGP_LPJ_G0016212.1 mouse_genomes_project 1 93428112 93433954 - Col6a3 protein_coding retained_intron MGP_LPJ_T0021174.1 MGP_LPJ_G0016212.1 mouse_genomes_project 1 93461593 93478012 - Col6a3 protein_coding retained_intron MGP_LPJ_T0021175.1 MGP_LPJ_G0016212.1 mouse_genomes_project 1 93464012 93464842 - Col6a3 protein_coding retained_intron MGP_LPJ_T0021176.1 MGP_LPJ_G0016212.1 mouse_genomes_project 1 93472555 93526385 - MGP_LPJ_P0021176 Col6a3 protein_coding protein_coding MGP_LPJ_T0021177.1 MGP_LPJ_G0016212.1 mouse_genomes_project 1 93493140 93526428 - MGP_LPJ_P0021177 Col6a3 protein_coding protein_coding MGP_LPJ_T0099968.1 MGP_LPJ_G0038231.1 mouse_genomes_project 1 29773900 29774027 - Gm26145 snoRNA snoRNA MGP_LPJ_T0020166.1 MGP_LPJ_G0016014.1 mouse_genomes_project 1 65876281 66049311 - MGP_LPJ_P0020166 Plekhm3 protein_coding nonsense_mediated_decay MGP_LPJ_T0020167.1 MGP_LPJ_G0016014.1 mouse_genomes_project 1 65879419 66049311 - MGP_LPJ_P0020167 Plekhm3 protein_coding protein_coding MGP_LPJ_T0020168.1 MGP_LPJ_G0016014.1 mouse_genomes_project 1 65884107 65925003 - Plekhm3 protein_coding processed_transcript MGP_LPJ_T0020169.1 MGP_LPJ_G0016014.1 mouse_genomes_project 1 65948678 66019208 - Plekhm3 protein_coding retained_intron MGP_LPJ_T0020170.1 MGP_LPJ_G0016014.1 mouse_genomes_project 1 66030778 66049262 - MGP_LPJ_P0020170 Plekhm3 protein_coding protein_coding MGP_LPJ_T0020171.1 MGP_LPJ_G0016014.1 mouse_genomes_project 1 66045650 66049214 - Plekhm3 protein_coding processed_transcript MGP_LPJ_T0012360.1 MGP_LPJ_G0010451.1 mouse_genomes_project 1 195048799 195049124 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002769.1 MGP_LPJ_G0002641.1 mouse_genomes_project 1 2200041 2206396 + Gm16041 antisense antisense MGP_LPJ_T0012335.1 MGP_LPJ_G0010426.1 mouse_genomes_project 1 179730444 179730875 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002787.1 MGP_LPJ_G0002650.1 mouse_genomes_project 1 15361393 15393828 - Gm28154 antisense antisense MGP_LPJ_T0005912.1 MGP_LPJ_G0004956.1 mouse_genomes_project 1 125392268 125395531 + Gm29359 lincRNA lincRNA MGP_LPJ_T0002816.1 MGP_LPJ_G0002673.1 mouse_genomes_project 1 39193954 39204240 - Gm16894 antisense antisense MGP_LPJ_T0099957.1 MGP_LPJ_G0038220.1 mouse_genomes_project 1 12673668 12673788 - Gm26345 snoRNA snoRNA MGP_LPJ_T0000518.1 MGP_LPJ_G0000453.1 mouse_genomes_project 1 60791489 60792210 - TEC TEC MGP_LPJ_T0012184.1 MGP_LPJ_G0010275.1 mouse_genomes_project 1 113184832 113185019 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011276.1 MGP_LPJ_G0009394.1 mouse_genomes_project 1 192712315 192712590 - Gm23780 misc_RNA misc_RNA MGP_LPJ_T0002944.1 MGP_LPJ_G0002770.1 mouse_genomes_project 1 163658405 163673521 - Gm15486 antisense antisense MGP_LPJ_T0098092.1 MGP_LPJ_G0036373.1 mouse_genomes_project 1 143096440 143096560 - Gm23782 rRNA rRNA MGP_LPJ_T0005716.1 MGP_LPJ_G0004810.1 mouse_genomes_project 1 40347630 40361503 - 4930448I06Rik lincRNA lincRNA MGP_LPJ_T0002808.1 MGP_LPJ_G0002667.1 mouse_genomes_project 1 36937637 36960531 + Gm15457 antisense antisense MGP_LPJ_T0098773.1 MGP_LPJ_G0037036.1 mouse_genomes_project 1 122740563 122740693 + Gm23497 snRNA snRNA MGP_LPJ_T0020244.1 MGP_LPJ_G0016029.1 mouse_genomes_project 1 67905167 67926466 + MGP_LPJ_P0020244 Rpe protein_coding nonsense_mediated_decay MGP_LPJ_T0020245.1 MGP_LPJ_G0016029.1 mouse_genomes_project 1 67905167 67920295 + MGP_LPJ_P0020245 Rpe protein_coding nonsense_mediated_decay MGP_LPJ_T0020246.1 MGP_LPJ_G0016029.1 mouse_genomes_project 1 67905167 67926466 + MGP_LPJ_P0020246 Rpe protein_coding protein_coding MGP_LPJ_T0020247.1 MGP_LPJ_G0016029.1 mouse_genomes_project 1 67905167 67926466 + MGP_LPJ_P0020247 Rpe protein_coding protein_coding MGP_LPJ_T0020248.1 MGP_LPJ_G0016029.1 mouse_genomes_project 1 67905243 67922889 + MGP_LPJ_P0020248 Rpe protein_coding nonsense_mediated_decay MGP_LPJ_T0005703.1 MGP_LPJ_G0004800.1 mouse_genomes_project 1 34740195 34741458 + 1110002O04Rik lincRNA lincRNA MGP_LPJ_T0022967.1 MGP_LPJ_G0016579.1 mouse_genomes_project 1 169110341 169122922 + MGP_LPJ_P0022967 Myoc protein_coding protein_coding MGP_LPJ_T0011874.1 MGP_LPJ_G0009965.1 mouse_genomes_project 1 3644038 3644511 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018680.1 MGP_LPJ_G0015731.1 mouse_genomes_project 1 2134301 2300292 - MGP_LPJ_P0018680 Rgs20 protein_coding protein_coding MGP_LPJ_T0018681.1 MGP_LPJ_G0015731.1 mouse_genomes_project 1 2137065 2246388 - MGP_LPJ_P0018681 Rgs20 protein_coding nonsense_mediated_decay MGP_LPJ_T0018682.1 MGP_LPJ_G0015731.1 mouse_genomes_project 1 2137065 2246388 - MGP_LPJ_P0018682 Rgs20 protein_coding protein_coding MGP_LPJ_T0018683.1 MGP_LPJ_G0015731.1 mouse_genomes_project 1 2138933 2300289 - MGP_LPJ_P0018683 Rgs20 protein_coding protein_coding MGP_LPJ_T0018684.1 MGP_LPJ_G0015731.1 mouse_genomes_project 1 2150173 2246388 - Rgs20 protein_coding retained_intron MGP_LPJ_T0018685.1 MGP_LPJ_G0015731.1 mouse_genomes_project 1 2290656 2300280 - Rgs20 protein_coding processed_transcript MGP_LPJ_T0002871.1 MGP_LPJ_G0002713.1 mouse_genomes_project 1 88659950 88660815 - Gm28626 antisense antisense MGP_LPJ_T0019231.1 MGP_LPJ_G0015836.1 mouse_genomes_project 1 35267034 35316600 + MGP_LPJ_P0019231 Fer1l5 protein_coding protein_coding MGP_LPJ_T0019232.1 MGP_LPJ_G0015836.1 mouse_genomes_project 1 35280195 35299325 + MGP_LPJ_P0019232 Fer1l5 protein_coding nonsense_mediated_decay MGP_LPJ_T0019233.1 MGP_LPJ_G0015836.1 mouse_genomes_project 1 35311380 35316603 + MGP_LPJ_P0019233 Fer1l5 protein_coding nonsense_mediated_decay MGP_LPJ_T0019467.1 MGP_LPJ_G0015881.1 mouse_genomes_project 1 39559612 39579925 + MGP_LPJ_P0019467 Il1rl1 protein_coding protein_coding MGP_LPJ_T0019468.1 MGP_LPJ_G0015881.1 mouse_genomes_project 1 39567818 39572637 + MGP_LPJ_P0019468 Il1rl1 protein_coding protein_coding MGP_LPJ_T0019469.1 MGP_LPJ_G0015881.1 mouse_genomes_project 1 39570856 39595938 + MGP_LPJ_P0019469 Il1rl1 protein_coding protein_coding MGP_LPJ_T0019470.1 MGP_LPJ_G0015881.1 mouse_genomes_project 1 39571005 39581350 + MGP_LPJ_P0019470 Il1rl1 protein_coding protein_coding MGP_LPJ_T0019471.1 MGP_LPJ_G0015881.1 mouse_genomes_project 1 39571857 39595919 + MGP_LPJ_P0019471 Il1rl1 protein_coding protein_coding MGP_LPJ_T0098723.1 MGP_LPJ_G0036986.1 mouse_genomes_project 1 6895068 6895171 + Gm24765 snRNA snRNA MGP_LPJ_T0002869.1 MGP_LPJ_G0002711.1 mouse_genomes_project 1 88268173 88272267 - Gm28884 antisense antisense MGP_LPJ_T0023740.1 MGP_LPJ_G0016779.1 mouse_genomes_project 1 187401813 187460773 - MGP_LPJ_P0023740 Ahctf1 protein_coding protein_coding MGP_LPJ_T0023741.1 MGP_LPJ_G0016779.1 mouse_genomes_project 1 187402256 187409329 - MGP_LPJ_P0023741 Ahctf1 protein_coding protein_coding MGP_LPJ_T0023742.1 MGP_LPJ_G0016779.1 mouse_genomes_project 1 187403010 187410500 - Ahctf1 protein_coding retained_intron MGP_LPJ_T0023743.1 MGP_LPJ_G0016779.1 mouse_genomes_project 1 187410618 187414909 - MGP_LPJ_P0023743 Ahctf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0023744.1 MGP_LPJ_G0016779.1 mouse_genomes_project 1 187417182 187422893 - MGP_LPJ_P0023744 Ahctf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0023745.1 MGP_LPJ_G0016779.1 mouse_genomes_project 1 187425280 187427904 - MGP_LPJ_P0023745 Ahctf1 protein_coding protein_coding MGP_LPJ_T0023746.1 MGP_LPJ_G0016779.1 mouse_genomes_project 1 187449930 187453084 - Ahctf1 protein_coding retained_intron MGP_LPJ_T0023747.1 MGP_LPJ_G0016779.1 mouse_genomes_project 1 187455796 187459056 - Ahctf1 protein_coding retained_intron MGP_LPJ_T0023748.1 MGP_LPJ_G0016779.1 mouse_genomes_project 1 187455802 187460699 - Ahctf1 protein_coding retained_intron MGP_LPJ_T0021230.1 MGP_LPJ_G0016222.1 mouse_genomes_project 1 94051054 94062831 + MGP_LPJ_P0021230 Klhl30 protein_coding protein_coding MGP_LPJ_T0021670.1 MGP_LPJ_G0016319.1 mouse_genomes_project 1 124041813 124119459 - MGP_LPJ_P0021670 Cfap221 protein_coding protein_coding MGP_LPJ_T0021671.1 MGP_LPJ_G0016319.1 mouse_genomes_project 1 124041991 124117485 - MGP_LPJ_P0021671 Cfap221 protein_coding protein_coding MGP_LPJ_T0021672.1 MGP_LPJ_G0016319.1 mouse_genomes_project 1 124082870 124119503 - MGP_LPJ_P0021672 Cfap221 protein_coding protein_coding MGP_LPJ_T0099980.1 MGP_LPJ_G0038243.1 mouse_genomes_project 1 58882957 58883067 - Gm24548 snoRNA snoRNA MGP_LPJ_T0016929.1 MGP_LPJ_G0015009.1 mouse_genomes_project 1 41998164 42005733 - Pantr2 processed_transcript lincRNA MGP_LPJ_T0016930.1 MGP_LPJ_G0015009.1 mouse_genomes_project 1 41998175 41999156 - Pantr2 processed_transcript TEC MGP_LPJ_T0023661.1 MGP_LPJ_G0016761.1 mouse_genomes_project 1 184070887 184147459 - MGP_LPJ_P0023661 Cep170 protein_coding protein_coding MGP_LPJ_T0023662.1 MGP_LPJ_G0016761.1 mouse_genomes_project 1 184070896 184154359 - MGP_LPJ_P0023662 Cep170 protein_coding protein_coding MGP_LPJ_T0023663.1 MGP_LPJ_G0016761.1 mouse_genomes_project 1 184070896 184092473 - MGP_LPJ_P0023663 Cep170 protein_coding protein_coding MGP_LPJ_T0023664.1 MGP_LPJ_G0016761.1 mouse_genomes_project 1 184070897 184132387 - MGP_LPJ_P0023664 Cep170 protein_coding protein_coding MGP_LPJ_T0023665.1 MGP_LPJ_G0016761.1 mouse_genomes_project 1 184071335 184088121 - Cep170 protein_coding retained_intron MGP_LPJ_T0023666.1 MGP_LPJ_G0016761.1 mouse_genomes_project 1 184071373 184093656 - MGP_LPJ_P0023666 Cep170 protein_coding protein_coding MGP_LPJ_T0023667.1 MGP_LPJ_G0016761.1 mouse_genomes_project 1 184071575 184132397 - MGP_LPJ_P0023667 Cep170 protein_coding nonsense_mediated_decay MGP_LPJ_T0023668.1 MGP_LPJ_G0016761.1 mouse_genomes_project 1 184072384 184087770 - MGP_LPJ_P0023668 Cep170 protein_coding protein_coding MGP_LPJ_T0023669.1 MGP_LPJ_G0016761.1 mouse_genomes_project 1 184072822 184091537 - Cep170 protein_coding processed_transcript MGP_LPJ_T0023670.1 MGP_LPJ_G0016761.1 mouse_genomes_project 1 184077717 184080340 - Cep170 protein_coding retained_intron MGP_LPJ_T0023671.1 MGP_LPJ_G0016761.1 mouse_genomes_project 1 184109806 184115334 - Cep170 protein_coding retained_intron MGP_LPJ_T0023672.1 MGP_LPJ_G0016761.1 mouse_genomes_project 1 184111565 184120527 - MGP_LPJ_P0023672 Cep170 protein_coding protein_coding MGP_LPJ_T0023673.1 MGP_LPJ_G0016761.1 mouse_genomes_project 1 184115468 184154359 - MGP_LPJ_P0023673 Cep170 protein_coding protein_coding MGP_LPJ_T0023674.1 MGP_LPJ_G0016761.1 mouse_genomes_project 1 184126632 184147465 - Cep170 protein_coding retained_intron MGP_LPJ_T0023675.1 MGP_LPJ_G0016761.1 mouse_genomes_project 1 184126709 184147459 - MGP_LPJ_P0023675 Cep170 protein_coding protein_coding MGP_LPJ_T0012003.1 MGP_LPJ_G0010094.1 mouse_genomes_project 1 44563268 44564208 + processed_pseudogene processed_pseudogene MGP_LPJ_T0020616.1 MGP_LPJ_G0016097.1 mouse_genomes_project 1 76935375 76954914 - MGP_LPJ_P0020616 Ptprn protein_coding protein_coding MGP_LPJ_T0020617.1 MGP_LPJ_G0016097.1 mouse_genomes_project 1 76947558 76948698 - Ptprn protein_coding retained_intron MGP_LPJ_T0020618.1 MGP_LPJ_G0016097.1 mouse_genomes_project 1 76949191 76954608 - MGP_LPJ_P0020618 Ptprn protein_coding protein_coding MGP_LPJ_T0020619.1 MGP_LPJ_G0016097.1 mouse_genomes_project 1 76949191 76954751 - MGP_LPJ_P0020619 Ptprn protein_coding protein_coding MGP_LPJ_T0020620.1 MGP_LPJ_G0016097.1 mouse_genomes_project 1 76949259 76955203 - MGP_LPJ_P0020620 Ptprn protein_coding protein_coding MGP_LPJ_T0020621.1 MGP_LPJ_G0016097.1 mouse_genomes_project 1 76949283 76954909 - Ptprn protein_coding processed_transcript MGP_LPJ_T0020310.1 MGP_LPJ_G0016042.1 mouse_genomes_project 1 73086298 73156717 - MGP_LPJ_P0020310 Fn1 protein_coding protein_coding MGP_LPJ_T0020311.1 MGP_LPJ_G0016042.1 mouse_genomes_project 1 73086301 73156717 - MGP_LPJ_P0020311 Fn1 protein_coding protein_coding MGP_LPJ_T0020312.1 MGP_LPJ_G0016042.1 mouse_genomes_project 1 73086301 73156717 - MGP_LPJ_P0020312 Fn1 protein_coding protein_coding MGP_LPJ_T0020313.1 MGP_LPJ_G0016042.1 mouse_genomes_project 1 73086301 73156717 - MGP_LPJ_P0020313 Fn1 protein_coding protein_coding MGP_LPJ_T0020314.1 MGP_LPJ_G0016042.1 mouse_genomes_project 1 73086302 73156745 - MGP_LPJ_P0020314 Fn1 protein_coding protein_coding MGP_LPJ_T0020315.1 MGP_LPJ_G0016042.1 mouse_genomes_project 1 73086302 73156717 - MGP_LPJ_P0020315 Fn1 protein_coding protein_coding MGP_LPJ_T0020316.1 MGP_LPJ_G0016042.1 mouse_genomes_project 1 73086302 73156720 - MGP_LPJ_P0020316 Fn1 protein_coding protein_coding MGP_LPJ_T0020317.1 MGP_LPJ_G0016042.1 mouse_genomes_project 1 73086304 73111492 - Fn1 protein_coding retained_intron MGP_LPJ_T0020318.1 MGP_LPJ_G0016042.1 mouse_genomes_project 1 73087639 73091850 - Fn1 protein_coding retained_intron MGP_LPJ_T0020319.1 MGP_LPJ_G0016042.1 mouse_genomes_project 1 73090875 73101070 - MGP_LPJ_P0020319 Fn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0020320.1 MGP_LPJ_G0016042.1 mouse_genomes_project 1 73099061 73103078 - MGP_LPJ_P0020320 Fn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0020321.1 MGP_LPJ_G0016042.1 mouse_genomes_project 1 73101088 73103546 - Fn1 protein_coding retained_intron MGP_LPJ_T0020322.1 MGP_LPJ_G0016042.1 mouse_genomes_project 1 73104798 73126278 - Fn1 protein_coding retained_intron MGP_LPJ_T0020323.1 MGP_LPJ_G0016042.1 mouse_genomes_project 1 73131390 73144109 - MGP_LPJ_P0020323 Fn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0020324.1 MGP_LPJ_G0016042.1 mouse_genomes_project 1 73145645 73156706 - MGP_LPJ_P0020324 Fn1 protein_coding protein_coding MGP_LPJ_T0020325.1 MGP_LPJ_G0016042.1 mouse_genomes_project 1 73147297 73156717 - Fn1 protein_coding retained_intron MGP_LPJ_T0020326.1 MGP_LPJ_G0016042.1 mouse_genomes_project 1 73148463 73156717 - MGP_LPJ_P0020326 Fn1 protein_coding protein_coding MGP_LPJ_T0021450.1 MGP_LPJ_G0016271.1 mouse_genomes_project 1 96946482 96951447 + MGP_LPJ_P0021450 Neu4 protein_coding protein_coding MGP_LPJ_T0021451.1 MGP_LPJ_G0016271.1 mouse_genomes_project 1 96946524 96954364 + MGP_LPJ_P0021451 Neu4 protein_coding protein_coding MGP_LPJ_T0000628.1 MGP_LPJ_G0000563.1 mouse_genomes_project 1 125504129 125507187 + TEC TEC MGP_LPJ_T0000687.1 MGP_LPJ_G0000620.1 mouse_genomes_project 1 143044980 143047133 + TEC TEC MGP_LPJ_T0012097.1 MGP_LPJ_G0010188.1 mouse_genomes_project 1 73216618 73216969 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005876.1 MGP_LPJ_G0004930.1 mouse_genomes_project 1 101662740 101687435 + lincRNA lincRNA MGP_LPJ_T0005877.1 MGP_LPJ_G0004930.1 mouse_genomes_project 1 101662741 101687195 + lincRNA lincRNA MGP_LPJ_T0005739.1 MGP_LPJ_G0004820.1 mouse_genomes_project 1 43086335 43086947 + Gm29157 lincRNA lincRNA MGP_LPJ_T0000759.1 MGP_LPJ_G0000692.1 mouse_genomes_project 1 169580528 169582511 + TEC TEC MGP_LPJ_T0005884.1 MGP_LPJ_G0004936.1 mouse_genomes_project 1 109808476 109810273 - A530053M12Rik lincRNA lincRNA MGP_LPJ_T0012129.1 MGP_LPJ_G0010220.1 mouse_genomes_project 1 88843728 88844076 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012009.1 MGP_LPJ_G0010100.1 mouse_genomes_project 1 45285944 45287120 + processed_pseudogene processed_pseudogene MGP_LPJ_T0019522.1 MGP_LPJ_G0015895.1 mouse_genomes_project 1 43074025 43085999 + MGP_LPJ_P0019522 1500015O10Rik protein_coding protein_coding MGP_LPJ_T0005778.1 MGP_LPJ_G0004852.1 mouse_genomes_project 1 64132781 64136771 + Ino80dos lincRNA lincRNA MGP_LPJ_T0005779.1 MGP_LPJ_G0004852.1 mouse_genomes_project 1 64134846 64137142 + Ino80dos lincRNA lincRNA MGP_LPJ_T0005780.1 MGP_LPJ_G0004852.1 mouse_genomes_project 1 64136281 64186131 + Ino80dos lincRNA lincRNA MGP_LPJ_T0005781.1 MGP_LPJ_G0004852.1 mouse_genomes_project 1 64136550 64185283 + Ino80dos lincRNA lincRNA MGP_LPJ_T0018861.1 MGP_LPJ_G0015757.1 mouse_genomes_project 1 10695991 10932645 - MGP_LPJ_P0018861 Ncoa2 protein_coding protein_coding MGP_LPJ_T0018862.1 MGP_LPJ_G0015757.1 mouse_genomes_project 1 10696045 10934289 - MGP_LPJ_P0018862 Ncoa2 protein_coding protein_coding MGP_LPJ_T0018863.1 MGP_LPJ_G0015757.1 mouse_genomes_project 1 10699364 10934289 - MGP_LPJ_P0018863 Ncoa2 protein_coding protein_coding MGP_LPJ_T0018864.1 MGP_LPJ_G0015757.1 mouse_genomes_project 1 10702196 10703511 - Ncoa2 protein_coding processed_transcript MGP_LPJ_T0018865.1 MGP_LPJ_G0015757.1 mouse_genomes_project 1 10703480 10705390 - Ncoa2 protein_coding retained_intron MGP_LPJ_T0018866.1 MGP_LPJ_G0015757.1 mouse_genomes_project 1 10705311 10707888 - Ncoa2 protein_coding retained_intron MGP_LPJ_T0018867.1 MGP_LPJ_G0015757.1 mouse_genomes_project 1 10722063 10934289 - Ncoa2 protein_coding retained_intron MGP_LPJ_T0018868.1 MGP_LPJ_G0015757.1 mouse_genomes_project 1 10723490 10934235 - Ncoa2 protein_coding retained_intron MGP_LPJ_T0018869.1 MGP_LPJ_G0015757.1 mouse_genomes_project 1 10740684 10932635 - Ncoa2 protein_coding retained_intron MGP_LPJ_T0018870.1 MGP_LPJ_G0015757.1 mouse_genomes_project 1 10743017 10934235 - Ncoa2 protein_coding retained_intron MGP_LPJ_T0018871.1 MGP_LPJ_G0015757.1 mouse_genomes_project 1 10748516 10857844 - MGP_LPJ_P0018871 Ncoa2 protein_coding protein_coding MGP_LPJ_T0018892.1 MGP_LPJ_G0015764.1 mouse_genomes_project 1 12946007 13392081 + MGP_LPJ_P0018892 Kcnb2 protein_coding protein_coding MGP_LPJ_T0018893.1 MGP_LPJ_G0015764.1 mouse_genomes_project 1 12971559 13403315 + MGP_LPJ_P0018893 Kcnb2 protein_coding protein_coding MGP_LPJ_T0011922.1 MGP_LPJ_G0010013.1 mouse_genomes_project 1 17154663 17156905 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021336.1 MGP_LPJ_G0016248.1 mouse_genomes_project 1 95795583 95803022 + MGP_LPJ_P0021336 Aqp12 protein_coding protein_coding MGP_LPJ_T0023940.1 MGP_LPJ_G0016817.1 mouse_genomes_project 1 191107888 191130715 - MGP_LPJ_P0023940 Brox protein_coding protein_coding MGP_LPJ_T0023941.1 MGP_LPJ_G0016817.1 mouse_genomes_project 1 191107890 191128608 - MGP_LPJ_P0023941 Brox protein_coding protein_coding MGP_LPJ_T0023942.1 MGP_LPJ_G0016817.1 mouse_genomes_project 1 191108600 191130773 - MGP_LPJ_P0023942 Brox protein_coding nonsense_mediated_decay MGP_LPJ_T0023943.1 MGP_LPJ_G0016817.1 mouse_genomes_project 1 191117512 191119926 - Brox protein_coding retained_intron MGP_LPJ_T0023944.1 MGP_LPJ_G0016817.1 mouse_genomes_project 1 191119869 191126449 - Brox protein_coding retained_intron MGP_LPJ_T0023945.1 MGP_LPJ_G0016817.1 mouse_genomes_project 1 191119924 191128608 - MGP_LPJ_P0023945 Brox protein_coding nonsense_mediated_decay MGP_LPJ_T0023946.1 MGP_LPJ_G0016817.1 mouse_genomes_project 1 191121484 191126016 - Brox protein_coding retained_intron MGP_LPJ_T0023947.1 MGP_LPJ_G0016817.1 mouse_genomes_project 1 191124586 191128608 - Brox protein_coding processed_transcript MGP_LPJ_T0023948.1 MGP_LPJ_G0016817.1 mouse_genomes_project 1 191125680 191129596 - MGP_LPJ_P0023948 Brox protein_coding protein_coding MGP_LPJ_T0022796.1 MGP_LPJ_G0016551.1 mouse_genomes_project 1 163667830 163737200 + MGP_LPJ_P0022796 Sec16b protein_coding protein_coding MGP_LPJ_T0022797.1 MGP_LPJ_G0016551.1 mouse_genomes_project 1 163667912 163737203 + MGP_LPJ_P0022797 Sec16b protein_coding protein_coding MGP_LPJ_T0022798.1 MGP_LPJ_G0016551.1 mouse_genomes_project 1 163689114 163737200 + MGP_LPJ_P0022798 Sec16b protein_coding protein_coding MGP_LPJ_T0022799.1 MGP_LPJ_G0016551.1 mouse_genomes_project 1 163698339 163731088 + MGP_LPJ_P0022799 Sec16b protein_coding protein_coding MGP_LPJ_T0022800.1 MGP_LPJ_G0016551.1 mouse_genomes_project 1 163703256 163709249 + Sec16b protein_coding retained_intron MGP_LPJ_T0000613.1 MGP_LPJ_G0000548.1 mouse_genomes_project 1 108130163 108133197 + TEC TEC MGP_LPJ_T0018950.1 MGP_LPJ_G0015775.1 mouse_genomes_project 1 14685178 14727584 - MGP_LPJ_P0018950 Jph1 protein_coding nonsense_mediated_decay MGP_LPJ_T0018951.1 MGP_LPJ_G0015775.1 mouse_genomes_project 1 14718004 14818966 - MGP_LPJ_P0018951 Jph1 protein_coding protein_coding MGP_LPJ_T0000792.1 MGP_LPJ_G0000725.1 mouse_genomes_project 1 185014393 185015624 - TEC TEC MGP_LPJ_T0009504.1 MGP_LPJ_G0007622.1 mouse_genomes_project 1 48898261 48898703 + Gm22693 miRNA miRNA MGP_LPJ_T0000781.1 MGP_LPJ_G0000714.1 mouse_genomes_project 1 183499142 183501578 + TEC TEC MGP_LPJ_T0101468.1 MGP_LPJ_G0039620.1 mouse_genomes_project 1 87281463 87288313 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0022370.1 MGP_LPJ_G0016470.1 mouse_genomes_project 1 144345101 144531255 - MGP_LPJ_P0022370 Crb1 protein_coding protein_coding MGP_LPJ_T0022371.1 MGP_LPJ_G0016470.1 mouse_genomes_project 1 144346285 144350292 - Crb1 protein_coding retained_intron MGP_LPJ_T0022372.1 MGP_LPJ_G0016470.1 mouse_genomes_project 1 144377526 144531278 - MGP_LPJ_P0022372 Crb1 protein_coding protein_coding MGP_LPJ_T0022373.1 MGP_LPJ_G0016470.1 mouse_genomes_project 1 144395377 144406924 - Crb1 protein_coding retained_intron MGP_LPJ_T0022374.1 MGP_LPJ_G0016470.1 mouse_genomes_project 1 144397424 144531219 - MGP_LPJ_P0022374 Crb1 protein_coding protein_coding MGP_LPJ_T0022375.1 MGP_LPJ_G0016470.1 mouse_genomes_project 1 144398486 144481656 - MGP_LPJ_P0022375 Crb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0022376.1 MGP_LPJ_G0016470.1 mouse_genomes_project 1 144398501 144481676 - MGP_LPJ_P0022376 Crb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0000411.1 MGP_LPJ_G0000349.1 mouse_genomes_project 1 8934870 8937340 + TEC TEC MGP_LPJ_T0005971.1 MGP_LPJ_G0005005.1 mouse_genomes_project 1 161056740 161102666 - Gm29282 lincRNA lincRNA MGP_LPJ_T0019021.1 MGP_LPJ_G0015798.1 mouse_genomes_project 1 21344024 21360759 - MGP_LPJ_P0019021 Ogfrl1 protein_coding protein_coding MGP_LPJ_T0019022.1 MGP_LPJ_G0015798.1 mouse_genomes_project 1 21347321 21358355 - Ogfrl1 protein_coding retained_intron MGP_LPJ_T0019023.1 MGP_LPJ_G0015798.1 mouse_genomes_project 1 21347856 21392140 - MGP_LPJ_P0019023 Ogfrl1 protein_coding protein_coding MGP_LPJ_T0019024.1 MGP_LPJ_G0015798.1 mouse_genomes_project 1 21369329 21392371 - Ogfrl1 protein_coding processed_transcript MGP_LPJ_T0012187.1 MGP_LPJ_G0010278.1 mouse_genomes_project 1 114220358 114221180 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005870.1 MGP_LPJ_G0004925.1 mouse_genomes_project 1 98979235 99014378 - 1700063A18Rik lincRNA lincRNA MGP_LPJ_T0022049.1 MGP_LPJ_G0016401.1 mouse_genomes_project 1 138154109 138167225 + MGP_LPJ_P0022049 Golt1a protein_coding protein_coding MGP_LPJ_T0022054.1 MGP_LPJ_G0016401.1 mouse_genomes_project 1 138154199 138165249 + MGP_LPJ_P0022054 Golt1a protein_coding protein_coding MGP_LPJ_T0012168.1 MGP_LPJ_G0010259.1 mouse_genomes_project 1 108687619 108687945 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012224.1 MGP_LPJ_G0010315.1 mouse_genomes_project 1 127466519 127466636 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009581.1 MGP_LPJ_G0007699.1 mouse_genomes_project 1 203143241 203143305 + Mir3962 miRNA miRNA MGP_LPJ_T0023802.1 MGP_LPJ_G0016786.1 mouse_genomes_project 1 188267945 188278731 + MGP_LPJ_P0023802 Parp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0023803.1 MGP_LPJ_G0016786.1 mouse_genomes_project 1 188267950 188302205 + MGP_LPJ_P0023803 Parp1 protein_coding protein_coding MGP_LPJ_T0023804.1 MGP_LPJ_G0016786.1 mouse_genomes_project 1 188268247 188277194 + MGP_LPJ_P0023804 Parp1 protein_coding protein_coding MGP_LPJ_T0023805.1 MGP_LPJ_G0016786.1 mouse_genomes_project 1 188289036 188291220 + Parp1 protein_coding retained_intron MGP_LPJ_T0023806.1 MGP_LPJ_G0016786.1 mouse_genomes_project 1 188290852 188294290 + Parp1 protein_coding retained_intron MGP_LPJ_T0023807.1 MGP_LPJ_G0016786.1 mouse_genomes_project 1 188299175 188301147 + Parp1 protein_coding retained_intron MGP_LPJ_T0023808.1 MGP_LPJ_G0016786.1 mouse_genomes_project 1 188299786 188301057 + Parp1 protein_coding retained_intron MGP_LPJ_T0023809.1 MGP_LPJ_G0016786.1 mouse_genomes_project 1 188299938 188302203 + MGP_LPJ_P0023809 Parp1 protein_coding protein_coding MGP_LPJ_T0022924.1 MGP_LPJ_G0016570.1 mouse_genomes_project 1 167763211 167786178 + MGP_LPJ_P0022924 Tnfsf4 protein_coding protein_coding MGP_LPJ_T0020061.1 MGP_LPJ_G0015993.1 mouse_genomes_project 1 61431905 61520093 - MGP_LPJ_P0020061 Raph1 protein_coding protein_coding MGP_LPJ_T0020062.1 MGP_LPJ_G0015993.1 mouse_genomes_project 1 61432797 61450691 - MGP_LPJ_P0020062 Raph1 protein_coding protein_coding MGP_LPJ_T0020063.1 MGP_LPJ_G0015993.1 mouse_genomes_project 1 61432848 61520079 - MGP_LPJ_P0020063 Raph1 protein_coding protein_coding MGP_LPJ_T0020064.1 MGP_LPJ_G0015993.1 mouse_genomes_project 1 61441816 61520083 - MGP_LPJ_P0020064 Raph1 protein_coding protein_coding MGP_LPJ_T0020065.1 MGP_LPJ_G0015993.1 mouse_genomes_project 1 61444463 61447422 - Raph1 protein_coding retained_intron MGP_LPJ_T0020066.1 MGP_LPJ_G0015993.1 mouse_genomes_project 1 61452743 61454406 - Raph1 protein_coding retained_intron MGP_LPJ_T0020067.1 MGP_LPJ_G0015993.1 mouse_genomes_project 1 61466129 61474590 - Raph1 protein_coding retained_intron MGP_LPJ_T0020068.1 MGP_LPJ_G0015993.1 mouse_genomes_project 1 61477996 61520418 - MGP_LPJ_P0020068 Raph1 protein_coding protein_coding MGP_LPJ_T0021009.1 MGP_LPJ_G0016177.1 mouse_genomes_project 1 89615635 89628351 + MGP_LPJ_P0021009 Eif4e2 protein_coding protein_coding MGP_LPJ_T0021010.1 MGP_LPJ_G0016177.1 mouse_genomes_project 1 89615635 89642247 + MGP_LPJ_P0021010 Eif4e2 protein_coding protein_coding MGP_LPJ_T0021011.1 MGP_LPJ_G0016177.1 mouse_genomes_project 1 89615635 89630600 + MGP_LPJ_P0021011 Eif4e2 protein_coding protein_coding MGP_LPJ_T0021012.1 MGP_LPJ_G0016177.1 mouse_genomes_project 1 89615635 89636446 + MGP_LPJ_P0021012 Eif4e2 protein_coding protein_coding MGP_LPJ_T0021013.1 MGP_LPJ_G0016177.1 mouse_genomes_project 1 89615635 89642247 + MGP_LPJ_P0021013 Eif4e2 protein_coding protein_coding MGP_LPJ_T0021014.1 MGP_LPJ_G0016177.1 mouse_genomes_project 1 89615660 89628344 + MGP_LPJ_P0021014 Eif4e2 protein_coding protein_coding MGP_LPJ_T0021015.1 MGP_LPJ_G0016177.1 mouse_genomes_project 1 89615700 89627617 + MGP_LPJ_P0021015 Eif4e2 protein_coding protein_coding MGP_LPJ_T0021016.1 MGP_LPJ_G0016177.1 mouse_genomes_project 1 89616007 89629808 + MGP_LPJ_P0021016 Eif4e2 protein_coding protein_coding MGP_LPJ_T0011269.1 MGP_LPJ_G0009387.1 mouse_genomes_project 1 101003113 101003425 + Gm25413 misc_RNA misc_RNA MGP_LPJ_T0021390.1 MGP_LPJ_G0016259.1 mouse_genomes_project 1 96284004 96306215 + MGP_LPJ_P0021390 Sept2 protein_coding protein_coding MGP_LPJ_T0021391.1 MGP_LPJ_G0016259.1 mouse_genomes_project 1 96284007 96307602 + MGP_LPJ_P0021391 Sept2 protein_coding protein_coding MGP_LPJ_T0021392.1 MGP_LPJ_G0016259.1 mouse_genomes_project 1 96284035 96303744 + Sept2 protein_coding retained_intron MGP_LPJ_T0021393.1 MGP_LPJ_G0016259.1 mouse_genomes_project 1 96284049 96303350 + MGP_LPJ_P0021393 Sept2 protein_coding protein_coding MGP_LPJ_T0021394.1 MGP_LPJ_G0016259.1 mouse_genomes_project 1 96284059 96315662 + MGP_LPJ_P0021394 Sept2 protein_coding protein_coding MGP_LPJ_T0021395.1 MGP_LPJ_G0016259.1 mouse_genomes_project 1 96284073 96287387 + Sept2 protein_coding retained_intron MGP_LPJ_T0021396.1 MGP_LPJ_G0016259.1 mouse_genomes_project 1 96284073 96307606 + MGP_LPJ_P0021396 Sept2 protein_coding protein_coding MGP_LPJ_T0021397.1 MGP_LPJ_G0016259.1 mouse_genomes_project 1 96284122 96307631 + MGP_LPJ_P0021397 Sept2 protein_coding protein_coding MGP_LPJ_T0021398.1 MGP_LPJ_G0016259.1 mouse_genomes_project 1 96284234 96306133 + MGP_LPJ_P0021398 Sept2 protein_coding protein_coding MGP_LPJ_T0021399.1 MGP_LPJ_G0016259.1 mouse_genomes_project 1 96284237 96306215 + MGP_LPJ_P0021399 Sept2 protein_coding protein_coding MGP_LPJ_T0021400.1 MGP_LPJ_G0016259.1 mouse_genomes_project 1 96284487 96307629 + MGP_LPJ_P0021400 Sept2 protein_coding protein_coding MGP_LPJ_T0021401.1 MGP_LPJ_G0016259.1 mouse_genomes_project 1 96312289 96314116 + Sept2 protein_coding retained_intron MGP_LPJ_T0021402.1 MGP_LPJ_G0016259.1 mouse_genomes_project 1 96312664 96314443 + MGP_LPJ_P0021402 Sept2 protein_coding protein_coding MGP_LPJ_T0000616.1 MGP_LPJ_G0000551.1 mouse_genomes_project 1 109281216 109286271 - TEC TEC MGP_LPJ_T0000543.1 MGP_LPJ_G0000478.1 mouse_genomes_project 1 69957856 69959920 - TEC TEC MGP_LPJ_T0098735.1 MGP_LPJ_G0036998.1 mouse_genomes_project 1 31864704 31864814 + Gm24901 snRNA snRNA MGP_LPJ_T0000828.1 MGP_LPJ_G0000759.1 mouse_genomes_project 1 199783412 199784419 - TEC TEC MGP_LPJ_T0099970.1 MGP_LPJ_G0038233.1 mouse_genomes_project 1 38601738 38601954 + Gm24826 snoRNA snoRNA MGP_LPJ_T0000733.1 MGP_LPJ_G0000666.1 mouse_genomes_project 1 163166248 163168577 + TEC TEC MGP_LPJ_T0000834.1 MGP_LPJ_G0000764.1 mouse_genomes_project 1 201556451 201559010 + TEC TEC MGP_LPJ_T0006051.1 MGP_LPJ_G0005065.1 mouse_genomes_project 1 192365856 192397046 - 1700112H15Rik lincRNA lincRNA MGP_LPJ_T0023750.1 MGP_LPJ_G0016781.1 mouse_genomes_project 1 187629405 187840697 + MGP_LPJ_P0023750 Cdc42bpa protein_coding protein_coding MGP_LPJ_T0023751.1 MGP_LPJ_G0016781.1 mouse_genomes_project 1 187629518 187843144 + MGP_LPJ_P0023751 Cdc42bpa protein_coding protein_coding MGP_LPJ_T0023752.1 MGP_LPJ_G0016781.1 mouse_genomes_project 1 187629693 187786103 + MGP_LPJ_P0023752 Cdc42bpa protein_coding nonsense_mediated_decay MGP_LPJ_T0023753.1 MGP_LPJ_G0016781.1 mouse_genomes_project 1 187630085 187839707 + MGP_LPJ_P0023753 Cdc42bpa protein_coding protein_coding MGP_LPJ_T0023754.1 MGP_LPJ_G0016781.1 mouse_genomes_project 1 187630085 187839707 + MGP_LPJ_P0023754 Cdc42bpa protein_coding protein_coding MGP_LPJ_T0023755.1 MGP_LPJ_G0016781.1 mouse_genomes_project 1 187630085 187843152 + MGP_LPJ_P0023755 Cdc42bpa protein_coding unknown_likely_coding MGP_LPJ_T0023756.1 MGP_LPJ_G0016781.1 mouse_genomes_project 1 187645395 187715053 + Cdc42bpa protein_coding processed_transcript MGP_LPJ_T0023757.1 MGP_LPJ_G0016781.1 mouse_genomes_project 1 187661055 187711811 + Cdc42bpa protein_coding retained_intron MGP_LPJ_T0023758.1 MGP_LPJ_G0016781.1 mouse_genomes_project 1 187758479 187769015 + Cdc42bpa protein_coding retained_intron MGP_LPJ_T0023759.1 MGP_LPJ_G0016781.1 mouse_genomes_project 1 187775312 187840129 + MGP_LPJ_P0023759 Cdc42bpa protein_coding protein_coding MGP_LPJ_T0023760.1 MGP_LPJ_G0016781.1 mouse_genomes_project 1 187781185 187793723 + Cdc42bpa protein_coding retained_intron MGP_LPJ_T0023761.1 MGP_LPJ_G0016781.1 mouse_genomes_project 1 187783160 187786378 + Cdc42bpa protein_coding retained_intron MGP_LPJ_T0023762.1 MGP_LPJ_G0016781.1 mouse_genomes_project 1 187783360 187843143 + MGP_LPJ_P0023762 Cdc42bpa protein_coding protein_coding MGP_LPJ_T0023763.1 MGP_LPJ_G0016781.1 mouse_genomes_project 1 187783433 187826778 + MGP_LPJ_P0023763 Cdc42bpa protein_coding protein_coding MGP_LPJ_T0023764.1 MGP_LPJ_G0016781.1 mouse_genomes_project 1 187785550 187813335 + MGP_LPJ_P0023764 Cdc42bpa protein_coding protein_coding MGP_LPJ_T0023765.1 MGP_LPJ_G0016781.1 mouse_genomes_project 1 187785568 187790640 + Cdc42bpa protein_coding retained_intron MGP_LPJ_T0023766.1 MGP_LPJ_G0016781.1 mouse_genomes_project 1 187799170 187815163 + Cdc42bpa protein_coding processed_transcript MGP_LPJ_T0023767.1 MGP_LPJ_G0016781.1 mouse_genomes_project 1 187838547 187839835 + Cdc42bpa protein_coding retained_intron MGP_LPJ_T0019421.1 MGP_LPJ_G0015871.1 mouse_genomes_project 1 38447399 38555846 - MGP_LPJ_P0019421 Tbc1d8 protein_coding protein_coding MGP_LPJ_T0019422.1 MGP_LPJ_G0015871.1 mouse_genomes_project 1 38447774 38448341 - MGP_LPJ_P0019422 Tbc1d8 protein_coding nonsense_mediated_decay MGP_LPJ_T0019423.1 MGP_LPJ_G0015871.1 mouse_genomes_project 1 38448203 38555752 - MGP_LPJ_P0019423 Tbc1d8 protein_coding nonsense_mediated_decay MGP_LPJ_T0019424.1 MGP_LPJ_G0015871.1 mouse_genomes_project 1 38449223 38555791 - MGP_LPJ_P0019424 Tbc1d8 protein_coding protein_coding MGP_LPJ_T0019425.1 MGP_LPJ_G0015871.1 mouse_genomes_project 1 38467157 38468591 - Tbc1d8 protein_coding retained_intron MGP_LPJ_T0012095.1 MGP_LPJ_G0010186.1 mouse_genomes_project 1 72638947 72639722 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018785.1 MGP_LPJ_G0015748.1 mouse_genomes_project 1 7503307 7516830 - MGP_LPJ_P0018785 Cops5 protein_coding protein_coding MGP_LPJ_T0018786.1 MGP_LPJ_G0015748.1 mouse_genomes_project 1 7503549 7513832 - MGP_LPJ_P0018786 Cops5 protein_coding nonsense_mediated_decay MGP_LPJ_T0018787.1 MGP_LPJ_G0015748.1 mouse_genomes_project 1 7505904 7516644 - MGP_LPJ_P0018787 Cops5 protein_coding nonsense_mediated_decay MGP_LPJ_T0018788.1 MGP_LPJ_G0015748.1 mouse_genomes_project 1 7509386 7516852 - MGP_LPJ_P0018788 Cops5 protein_coding protein_coding MGP_LPJ_T0018789.1 MGP_LPJ_G0015748.1 mouse_genomes_project 1 7509617 7516641 - Cops5 protein_coding retained_intron MGP_LPJ_T0018790.1 MGP_LPJ_G0015748.1 mouse_genomes_project 1 7511742 7516871 - Cops5 protein_coding retained_intron MGP_LPJ_T0018791.1 MGP_LPJ_G0015748.1 mouse_genomes_project 1 7515982 7516648 - Cops5 protein_coding retained_intron MGP_LPJ_T0005892.1 MGP_LPJ_G0004942.1 mouse_genomes_project 1 117696666 117767736 - 9330185C12Rik lincRNA lincRNA MGP_LPJ_T0012369.1 MGP_LPJ_G0010460.1 mouse_genomes_project 1 200052037 200052369 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012029.1 MGP_LPJ_G0010120.1 mouse_genomes_project 1 51287673 51288698 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012267.1 MGP_LPJ_G0010358.1 mouse_genomes_project 1 150342068 150343212 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000536.1 MGP_LPJ_G0000471.1 mouse_genomes_project 1 67978275 67980830 - TEC TEC MGP_LPJ_T0000614.1 MGP_LPJ_G0000549.1 mouse_genomes_project 1 108266290 108269273 + TEC TEC MGP_LPJ_T0012307.1 MGP_LPJ_G0010398.1 mouse_genomes_project 1 168235820 168237024 + processed_pseudogene processed_pseudogene MGP_LPJ_T0019352.1 MGP_LPJ_G0015857.1 mouse_genomes_project 1 36871570 36887171 - MGP_LPJ_P0019352 Mitd1 protein_coding protein_coding MGP_LPJ_T0019353.1 MGP_LPJ_G0015857.1 mouse_genomes_project 1 36875657 36887175 - MGP_LPJ_P0019353 Mitd1 protein_coding protein_coding MGP_LPJ_T0019354.1 MGP_LPJ_G0015857.1 mouse_genomes_project 1 36875659 36876888 - Mitd1 protein_coding processed_transcript MGP_LPJ_T0019355.1 MGP_LPJ_G0015857.1 mouse_genomes_project 1 36875757 36878638 - Mitd1 protein_coding processed_transcript MGP_LPJ_T0019356.1 MGP_LPJ_G0015857.1 mouse_genomes_project 1 36878698 36887040 - Mitd1 protein_coding retained_intron MGP_LPJ_T0006038.1 MGP_LPJ_G0005057.1 mouse_genomes_project 1 190534662 190535161 + Gm37218 lincRNA lincRNA MGP_LPJ_T0005702.1 MGP_LPJ_G0004799.1 mouse_genomes_project 1 34657480 34661981 + Gm28415 lincRNA lincRNA MGP_LPJ_T0009496.1 MGP_LPJ_G0007614.1 mouse_genomes_project 1 35019553 35019615 - Mir6897 miRNA miRNA MGP_LPJ_T0020992.1 MGP_LPJ_G0016171.1 mouse_genomes_project 1 89499561 89503166 - MGP_LPJ_P0020992 Alpi protein_coding protein_coding MGP_LPJ_T0022175.1 MGP_LPJ_G0016432.1 mouse_genomes_project 1 139714664 139925365 - MGP_LPJ_P0022175 Ppp1r12b protein_coding protein_coding MGP_LPJ_T0022176.1 MGP_LPJ_G0016432.1 mouse_genomes_project 1 139715574 139720360 - Ppp1r12b protein_coding processed_transcript MGP_LPJ_T0022177.1 MGP_LPJ_G0016432.1 mouse_genomes_project 1 139719073 139811864 - Ppp1r12b protein_coding processed_transcript MGP_LPJ_T0022178.1 MGP_LPJ_G0016432.1 mouse_genomes_project 1 139719975 139925276 - MGP_LPJ_P0022178 Ppp1r12b protein_coding protein_coding MGP_LPJ_T0022179.1 MGP_LPJ_G0016432.1 mouse_genomes_project 1 139727189 139925365 - MGP_LPJ_P0022179 Ppp1r12b protein_coding protein_coding MGP_LPJ_T0022180.1 MGP_LPJ_G0016432.1 mouse_genomes_project 1 139741417 139768508 - Ppp1r12b protein_coding retained_intron MGP_LPJ_T0022181.1 MGP_LPJ_G0016432.1 mouse_genomes_project 1 139744436 139746783 - Ppp1r12b protein_coding retained_intron MGP_LPJ_T0022182.1 MGP_LPJ_G0016432.1 mouse_genomes_project 1 139799506 139801264 - Ppp1r12b protein_coding processed_transcript MGP_LPJ_T0022183.1 MGP_LPJ_G0016432.1 mouse_genomes_project 1 139799509 139925353 - Ppp1r12b protein_coding retained_intron MGP_LPJ_T0022184.1 MGP_LPJ_G0016432.1 mouse_genomes_project 1 139916208 139925367 - MGP_LPJ_P0022184 Ppp1r12b protein_coding protein_coding MGP_LPJ_T0020751.1 MGP_LPJ_G0016118.1 mouse_genomes_project 1 80697592 80700884 + MGP_LPJ_P0020751 Kcne4 protein_coding protein_coding MGP_LPJ_T0020752.1 MGP_LPJ_G0016118.1 mouse_genomes_project 1 80697761 80700884 + MGP_LPJ_P0020752 Kcne4 protein_coding protein_coding MGP_LPJ_T0002985.1 MGP_LPJ_G0002803.1 mouse_genomes_project 1 186502958 186523107 - Gm16564 antisense antisense MGP_LPJ_T0022402.1 MGP_LPJ_G0016479.1 mouse_genomes_project 1 148963190 149076207 - MGP_LPJ_P0022402 Cdc73 protein_coding protein_coding MGP_LPJ_T0022403.1 MGP_LPJ_G0016479.1 mouse_genomes_project 1 148970551 149006728 - Cdc73 protein_coding processed_transcript MGP_LPJ_T0022404.1 MGP_LPJ_G0016479.1 mouse_genomes_project 1 148999962 149002723 - Cdc73 protein_coding retained_intron MGP_LPJ_T0022405.1 MGP_LPJ_G0016479.1 mouse_genomes_project 1 149005616 149008699 - Cdc73 protein_coding retained_intron MGP_LPJ_T0012102.1 MGP_LPJ_G0010193.1 mouse_genomes_project 1 75152101 75153097 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000842.1 MGP_LPJ_G0000772.1 mouse_genomes_project 1 203336784 203339549 + TEC TEC MGP_LPJ_T0012032.1 MGP_LPJ_G0010123.1 mouse_genomes_project 1 52298100 52299496 - processed_pseudogene processed_pseudogene MGP_LPJ_T0019174.1 MGP_LPJ_G0015828.1 mouse_genomes_project 1 33438605 33587400 + MGP_LPJ_P0019174 protein_coding protein_coding MGP_LPJ_T0019175.1 MGP_LPJ_G0015828.1 mouse_genomes_project 1 33496855 33586490 + MGP_LPJ_P0019175 protein_coding protein_coding MGP_LPJ_T0019176.1 MGP_LPJ_G0015828.1 mouse_genomes_project 1 33513538 33581788 + MGP_LPJ_P0019176 protein_coding protein_coding MGP_LPJ_T0019177.1 MGP_LPJ_G0015828.1 mouse_genomes_project 1 33576408 33587976 + MGP_LPJ_P0019177 protein_coding protein_coding MGP_LPJ_T0019178.1 MGP_LPJ_G0015828.1 mouse_genomes_project 1 33576425 33583874 + protein_coding retained_intron MGP_LPJ_T0019179.1 MGP_LPJ_G0015828.1 mouse_genomes_project 1 33576426 33581342 + protein_coding retained_intron MGP_LPJ_T0019180.1 MGP_LPJ_G0015828.1 mouse_genomes_project 1 33576445 33583549 + MGP_LPJ_P0019180 protein_coding nonsense_mediated_decay MGP_LPJ_T0019004.1 MGP_LPJ_G0015795.1 mouse_genomes_project 1 19336421 19922730 - MGP_LPJ_P0019004 Kcnq5 protein_coding protein_coding MGP_LPJ_T0019005.1 MGP_LPJ_G0015795.1 mouse_genomes_project 1 19336426 19923091 - MGP_LPJ_P0019005 Kcnq5 protein_coding protein_coding MGP_LPJ_T0019006.1 MGP_LPJ_G0015795.1 mouse_genomes_project 1 19340179 19922730 - MGP_LPJ_P0019006 Kcnq5 protein_coding protein_coding MGP_LPJ_T0019007.1 MGP_LPJ_G0015795.1 mouse_genomes_project 1 19340179 19922730 - MGP_LPJ_P0019007 Kcnq5 protein_coding protein_coding MGP_LPJ_T0019008.1 MGP_LPJ_G0015795.1 mouse_genomes_project 1 19340179 19922730 - MGP_LPJ_P0019008 Kcnq5 protein_coding nonsense_mediated_decay MGP_LPJ_T0019009.1 MGP_LPJ_G0015795.1 mouse_genomes_project 1 19415550 19922814 - Kcnq5 protein_coding retained_intron MGP_LPJ_T0019010.1 MGP_LPJ_G0015795.1 mouse_genomes_project 1 19456415 19549667 - MGP_LPJ_P0019010 Kcnq5 protein_coding unknown_likely_coding MGP_LPJ_T0098740.1 MGP_LPJ_G0037003.1 mouse_genomes_project 1 45061728 45061835 - Gm23216 snRNA snRNA MGP_LPJ_T0006074.1 MGP_LPJ_G0005085.1 mouse_genomes_project 1 199336747 199338105 + Gm38161 lincRNA lincRNA MGP_LPJ_T0002890.1 MGP_LPJ_G0002730.1 mouse_genomes_project 1 108723170 108729469 + Gm17634 antisense antisense MGP_LPJ_T0002891.1 MGP_LPJ_G0002730.1 mouse_genomes_project 1 108723926 108729596 + Gm17634 antisense antisense MGP_LPJ_T0002892.1 MGP_LPJ_G0002730.1 mouse_genomes_project 1 108724312 108724676 + Gm17634 antisense antisense MGP_LPJ_T0101697.1 MGP_LPJ_G0039735.1 mouse_genomes_project 1 90627329 90627544 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0098743.1 MGP_LPJ_G0037006.1 mouse_genomes_project 1 54385212 54385326 - Gm24251 snRNA snRNA MGP_LPJ_T0005738.1 MGP_LPJ_G0004819.1 mouse_genomes_project 1 42567330 42621812 - Gm29040 lincRNA lincRNA MGP_LPJ_T0023053.1 MGP_LPJ_G0016600.1 mouse_genomes_project 1 170792197 170804468 + MGP_LPJ_P0023053 Ccdc181 protein_coding protein_coding MGP_LPJ_T0000598.1 MGP_LPJ_G0000533.1 mouse_genomes_project 1 93162687 93165498 + TEC TEC MGP_LPJ_T0021682.1 MGP_LPJ_G0016323.1 mouse_genomes_project 1 124252814 124324282 + MGP_LPJ_P0021682 3110009E18Rik protein_coding protein_coding MGP_LPJ_T0021683.1 MGP_LPJ_G0016323.1 mouse_genomes_project 1 124252822 124324282 + MGP_LPJ_P0021683 3110009E18Rik protein_coding protein_coding MGP_LPJ_T0021684.1 MGP_LPJ_G0016323.1 mouse_genomes_project 1 124252827 124324282 + MGP_LPJ_P0021684 3110009E18Rik protein_coding protein_coding MGP_LPJ_T0021685.1 MGP_LPJ_G0016323.1 mouse_genomes_project 1 124283110 124298713 + 3110009E18Rik protein_coding processed_transcript MGP_LPJ_T0021686.1 MGP_LPJ_G0016323.1 mouse_genomes_project 1 124283182 124302763 + MGP_LPJ_P0021686 3110009E18Rik protein_coding protein_coding MGP_LPJ_T0021687.1 MGP_LPJ_G0016323.1 mouse_genomes_project 1 124293258 124306802 + 3110009E18Rik protein_coding processed_transcript MGP_LPJ_T0023358.1 MGP_LPJ_G0016670.1 mouse_genomes_project 1 178188699 178194753 - MGP_LPJ_P0023358 Usp21 protein_coding protein_coding MGP_LPJ_T0023359.1 MGP_LPJ_G0016670.1 mouse_genomes_project 1 178188703 178194686 - MGP_LPJ_P0023359 Usp21 protein_coding protein_coding MGP_LPJ_T0023360.1 MGP_LPJ_G0016670.1 mouse_genomes_project 1 178188712 178189670 - Usp21 protein_coding retained_intron MGP_LPJ_T0023361.1 MGP_LPJ_G0016670.1 mouse_genomes_project 1 178188712 178194717 - MGP_LPJ_P0023361 Usp21 protein_coding nonsense_mediated_decay MGP_LPJ_T0023362.1 MGP_LPJ_G0016670.1 mouse_genomes_project 1 178188712 178194723 - MGP_LPJ_P0023362 Usp21 protein_coding protein_coding MGP_LPJ_T0023363.1 MGP_LPJ_G0016670.1 mouse_genomes_project 1 178189056 178189930 - Usp21 protein_coding retained_intron MGP_LPJ_T0023364.1 MGP_LPJ_G0016670.1 mouse_genomes_project 1 178189562 178191349 - Usp21 protein_coding retained_intron MGP_LPJ_T0023365.1 MGP_LPJ_G0016670.1 mouse_genomes_project 1 178189794 178190748 - Usp21 protein_coding retained_intron MGP_LPJ_T0023366.1 MGP_LPJ_G0016670.1 mouse_genomes_project 1 178190168 178192376 - Usp21 protein_coding retained_intron MGP_LPJ_T0023367.1 MGP_LPJ_G0016670.1 mouse_genomes_project 1 178190281 178193712 - Usp21 protein_coding retained_intron MGP_LPJ_T0023368.1 MGP_LPJ_G0016670.1 mouse_genomes_project 1 178191224 178194721 - Usp21 protein_coding retained_intron MGP_LPJ_T0023369.1 MGP_LPJ_G0016670.1 mouse_genomes_project 1 178191693 178193568 - MGP_LPJ_P0023369 Usp21 protein_coding protein_coding MGP_LPJ_T0019253.1 MGP_LPJ_G0015841.1 mouse_genomes_project 1 35441068 35453325 - MGP_LPJ_P0019253 Ankrd39 protein_coding protein_coding MGP_LPJ_T0006078.1 MGP_LPJ_G0005088.1 mouse_genomes_project 1 199665269 199694411 - Gm32200 lincRNA lincRNA MGP_LPJ_T0012371.1 MGP_LPJ_G0010462.1 mouse_genomes_project 1 200290402 200291195 - processed_pseudogene processed_pseudogene MGP_LPJ_T0022433.1 MGP_LPJ_G0016485.1 mouse_genomes_project 1 149507033 149547257 - MGP_LPJ_P0022433 Rgs13 protein_coding protein_coding MGP_LPJ_T0022434.1 MGP_LPJ_G0016485.1 mouse_genomes_project 1 149507046 149547160 - MGP_LPJ_P0022434 Rgs13 protein_coding protein_coding MGP_LPJ_T0023920.1 MGP_LPJ_G0016812.1 mouse_genomes_project 1 190392413 190436245 + Capn8 protein_coding processed_transcript MGP_LPJ_T0023921.1 MGP_LPJ_G0016812.1 mouse_genomes_project 1 190392418 190466558 + MGP_LPJ_P0023921 Capn8 protein_coding protein_coding MGP_LPJ_T0023922.1 MGP_LPJ_G0016812.1 mouse_genomes_project 1 190392444 190466446 + MGP_LPJ_P0023922 Capn8 protein_coding nonsense_mediated_decay MGP_LPJ_T0023923.1 MGP_LPJ_G0016812.1 mouse_genomes_project 1 190392467 190466313 + MGP_LPJ_P0023923 Capn8 protein_coding unknown_likely_coding MGP_LPJ_T0012014.1 MGP_LPJ_G0010105.1 mouse_genomes_project 1 47238431 47239762 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021300.1 MGP_LPJ_G0016241.1 mouse_genomes_project 1 95426082 95430706 - MGP_LPJ_P0021300 Otos protein_coding protein_coding MGP_LPJ_T0021301.1 MGP_LPJ_G0016241.1 mouse_genomes_project 1 95426083 95430119 - Otos protein_coding retained_intron MGP_LPJ_T0003007.1 MGP_LPJ_G0002822.1 mouse_genomes_project 1 198309310 198310274 + Gm28172 antisense antisense MGP_LPJ_T0021763.1 MGP_LPJ_G0016340.1 mouse_genomes_project 1 132298248 132340183 + MGP_LPJ_P0021763 Acmsd protein_coding protein_coding MGP_LPJ_T0021764.1 MGP_LPJ_G0016340.1 mouse_genomes_project 1 132327719 132340183 + Acmsd protein_coding processed_transcript MGP_LPJ_T0012122.1 MGP_LPJ_G0010213.1 mouse_genomes_project 1 85138646 85139018 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011892.1 MGP_LPJ_G0009983.1 mouse_genomes_project 1 6874545 6875181 - processed_pseudogene processed_pseudogene MGP_LPJ_T0021348.1 MGP_LPJ_G0016250.1 mouse_genomes_project 1 95926518 95936705 + MGP_LPJ_P0021348 Agxt protein_coding protein_coding MGP_LPJ_T0021349.1 MGP_LPJ_G0016250.1 mouse_genomes_project 1 95926846 95929291 + Agxt protein_coding retained_intron MGP_LPJ_T0021350.1 MGP_LPJ_G0016250.1 mouse_genomes_project 1 95931162 95936701 + Agxt protein_coding processed_transcript MGP_LPJ_T0009578.1 MGP_LPJ_G0007696.1 mouse_genomes_project 1 198640578 198640666 - miRNA miRNA MGP_LPJ_T0019322.1 MGP_LPJ_G0015851.1 mouse_genomes_project 1 36379754 36392739 - MGP_LPJ_P0019322 Coa5 protein_coding protein_coding MGP_LPJ_T0019323.1 MGP_LPJ_G0015851.1 mouse_genomes_project 1 36391147 36392636 - Coa5 protein_coding retained_intron MGP_LPJ_T0023724.1 MGP_LPJ_G0016775.1 mouse_genomes_project 1 187171545 187191190 - MGP_LPJ_P0023724 protein_coding protein_coding MGP_LPJ_T0019169.1 MGP_LPJ_G0015824.1 mouse_genomes_project 1 33229561 33234952 + MGP_LPJ_P0019169 Prss39 protein_coding protein_coding MGP_LPJ_T0019170.1 MGP_LPJ_G0015824.1 mouse_genomes_project 1 33229572 33231285 + MGP_LPJ_P0019170 Prss39 protein_coding nonsense_mediated_decay MGP_LPJ_T0021117.1 MGP_LPJ_G0016195.1 mouse_genomes_project 1 90683927 90703609 + MGP_LPJ_P0021117 Ugt1a2 protein_coding protein_coding MGP_LPJ_T0016968.1 MGP_LPJ_G0015026.1 mouse_genomes_project 1 140087241 140088181 - Ptprv processed_transcript retained_intron MGP_LPJ_T0016969.1 MGP_LPJ_G0015026.1 mouse_genomes_project 1 140087242 140112867 - Ptprv processed_transcript processed_transcript MGP_LPJ_T0016970.1 MGP_LPJ_G0015026.1 mouse_genomes_project 1 140087244 140088053 - Ptprv processed_transcript processed_transcript MGP_LPJ_T0016971.1 MGP_LPJ_G0015026.1 mouse_genomes_project 1 140087373 140088334 - Ptprv processed_transcript processed_transcript MGP_LPJ_T0016972.1 MGP_LPJ_G0015026.1 mouse_genomes_project 1 140088760 140089209 - Ptprv processed_transcript retained_intron MGP_LPJ_T0016973.1 MGP_LPJ_G0015026.1 mouse_genomes_project 1 140089019 140090285 - Ptprv processed_transcript retained_intron MGP_LPJ_T0016974.1 MGP_LPJ_G0015026.1 mouse_genomes_project 1 140089913 140091006 - Ptprv processed_transcript processed_transcript MGP_LPJ_T0016975.1 MGP_LPJ_G0015026.1 mouse_genomes_project 1 140106707 140112841 - Ptprv processed_transcript processed_transcript MGP_LPJ_T0016976.1 MGP_LPJ_G0015026.1 mouse_genomes_project 1 140106725 140108612 - Ptprv processed_transcript retained_intron MGP_LPJ_T0016977.1 MGP_LPJ_G0015026.1 mouse_genomes_project 1 140109805 140111436 - Ptprv processed_transcript processed_transcript MGP_LPJ_T0016978.1 MGP_LPJ_G0015026.1 mouse_genomes_project 1 140109914 140112816 - Ptprv processed_transcript processed_transcript MGP_LPJ_T0021495.1 MGP_LPJ_G0016281.1 mouse_genomes_project 1 101484409 101577883 + MGP_LPJ_P0021495 Slco6d1 protein_coding protein_coding MGP_LPJ_T0021496.1 MGP_LPJ_G0016281.1 mouse_genomes_project 1 101484412 101586191 + MGP_LPJ_P0021496 Slco6d1 protein_coding nonsense_mediated_decay MGP_LPJ_T0021497.1 MGP_LPJ_G0016281.1 mouse_genomes_project 1 101484439 101577750 + MGP_LPJ_P0021497 Slco6d1 protein_coding protein_coding MGP_LPJ_T0021498.1 MGP_LPJ_G0016281.1 mouse_genomes_project 1 101568681 101577886 + Slco6d1 protein_coding processed_transcript MGP_LPJ_T0000772.1 MGP_LPJ_G0000705.1 mouse_genomes_project 1 175364459 175365068 - TEC TEC MGP_LPJ_T0020794.1 MGP_LPJ_G0016128.1 mouse_genomes_project 1 83068622 83310372 + MGP_LPJ_P0020794 Nyap2 protein_coding protein_coding MGP_LPJ_T0020795.1 MGP_LPJ_G0016128.1 mouse_genomes_project 1 83068871 83310347 + MGP_LPJ_P0020795 Nyap2 protein_coding protein_coding MGP_LPJ_T0020796.1 MGP_LPJ_G0016128.1 mouse_genomes_project 1 83068973 83282370 + MGP_LPJ_P0020796 Nyap2 protein_coding protein_coding MGP_LPJ_T0020797.1 MGP_LPJ_G0016128.1 mouse_genomes_project 1 83068980 83311534 + MGP_LPJ_P0020797 Nyap2 protein_coding protein_coding MGP_LPJ_T0020798.1 MGP_LPJ_G0016128.1 mouse_genomes_project 1 83069239 83357119 + MGP_LPJ_P0020798 Nyap2 protein_coding protein_coding MGP_LPJ_T0005961.1 MGP_LPJ_G0004998.1 mouse_genomes_project 1 159688235 159706172 - C230024C17Rik lincRNA lincRNA MGP_LPJ_T0022662.1 MGP_LPJ_G0016530.1 mouse_genomes_project 1 161276881 161278392 - BC034090 protein_coding retained_intron MGP_LPJ_T0022663.1 MGP_LPJ_G0016530.1 mouse_genomes_project 1 161277930 161308236 - MGP_LPJ_P0022663 BC034090 protein_coding protein_coding MGP_LPJ_T0022664.1 MGP_LPJ_G0016530.1 mouse_genomes_project 1 161281934 161289371 - BC034090 protein_coding processed_transcript MGP_LPJ_T0022665.1 MGP_LPJ_G0016530.1 mouse_genomes_project 1 161282684 161289120 - BC034090 protein_coding processed_transcript MGP_LPJ_T0022666.1 MGP_LPJ_G0016530.1 mouse_genomes_project 1 161289635 161293831 - BC034090 protein_coding processed_transcript MGP_LPJ_T0022667.1 MGP_LPJ_G0016530.1 mouse_genomes_project 1 161289985 161296887 - MGP_LPJ_P0022667 BC034090 protein_coding protein_coding MGP_LPJ_T0022668.1 MGP_LPJ_G0016530.1 mouse_genomes_project 1 161290069 161304913 - BC034090 protein_coding retained_intron MGP_LPJ_T0022669.1 MGP_LPJ_G0016530.1 mouse_genomes_project 1 161293050 161295838 - BC034090 protein_coding retained_intron MGP_LPJ_T0022937.1 MGP_LPJ_G0016575.1 mouse_genomes_project 1 168390145 168394396 + MGP_LPJ_P0022937 Pigc protein_coding protein_coding MGP_LPJ_T0022938.1 MGP_LPJ_G0016575.1 mouse_genomes_project 1 168390147 168393291 + MGP_LPJ_P0022938 Pigc protein_coding protein_coding MGP_LPJ_T0022939.1 MGP_LPJ_G0016575.1 mouse_genomes_project 1 168390187 168394395 + MGP_LPJ_P0022939 Pigc protein_coding protein_coding MGP_LPJ_T0022940.1 MGP_LPJ_G0016575.1 mouse_genomes_project 1 168390258 168391833 + MGP_LPJ_P0022940 Pigc protein_coding protein_coding MGP_LPJ_T0022941.1 MGP_LPJ_G0016575.1 mouse_genomes_project 1 168390261 168391492 + MGP_LPJ_P0022941 Pigc protein_coding protein_coding MGP_LPJ_T0098813.1 MGP_LPJ_G0037076.1 mouse_genomes_project 1 200020851 200020955 - Gm22446 snRNA snRNA MGP_LPJ_T0000764.1 MGP_LPJ_G0000697.1 mouse_genomes_project 1 171936734 171938069 + TEC TEC MGP_LPJ_T0005972.1 MGP_LPJ_G0005006.1 mouse_genomes_project 1 161108942 161132662 - Gm9530 lincRNA lincRNA MGP_LPJ_T0012351.1 MGP_LPJ_G0010442.1 mouse_genomes_project 1 189880244 189880661 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012232.1 MGP_LPJ_G0010323.1 mouse_genomes_project 1 132706178 132706658 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012277.1 MGP_LPJ_G0010368.1 mouse_genomes_project 1 154575237 154579210 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000439.1 MGP_LPJ_G0000375.1 mouse_genomes_project 1 22131118 22133918 + TEC TEC MGP_LPJ_T0006018.1 MGP_LPJ_G0005043.1 mouse_genomes_project 1 183766927 183864633 - lincRNA lincRNA MGP_LPJ_T0021353.1 MGP_LPJ_G0016252.1 mouse_genomes_project 1 95960010 96025151 + MGP_LPJ_P0021353 Crocc2 protein_coding protein_coding MGP_LPJ_T0021354.1 MGP_LPJ_G0016252.1 mouse_genomes_project 1 95960010 96022936 + MGP_LPJ_P0021354 Crocc2 protein_coding unknown_likely_coding MGP_LPJ_T0012219.1 MGP_LPJ_G0010310.1 mouse_genomes_project 1 125834891 125835074 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002958.1 MGP_LPJ_G0002780.1 mouse_genomes_project 1 169451846 169533440 + Gm37273 antisense antisense MGP_LPJ_T0012177.1 MGP_LPJ_G0010268.1 mouse_genomes_project 1 111491207 111491806 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012309.1 MGP_LPJ_G0010400.1 mouse_genomes_project 1 169099349 169100060 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023545.1 MGP_LPJ_G0016710.1 mouse_genomes_project 1 179558771 179564527 - MGP_LPJ_P0023545 Fcrl6 protein_coding protein_coding MGP_LPJ_T0023546.1 MGP_LPJ_G0016710.1 mouse_genomes_project 1 179559666 179564523 - Fcrl6 protein_coding retained_intron MGP_LPJ_T0023547.1 MGP_LPJ_G0016710.1 mouse_genomes_project 1 179560105 179564527 - Fcrl6 protein_coding retained_intron MGP_LPJ_T0021119.1 MGP_LPJ_G0016197.1 mouse_genomes_project 1 90688835 90703609 + MGP_LPJ_P0021119 protein_coding protein_coding MGP_LPJ_T0009525.1 MGP_LPJ_G0007643.1 mouse_genomes_project 1 86324021 86324134 - Mir6353 miRNA miRNA MGP_LPJ_T0000402.1 MGP_LPJ_G0000340.1 mouse_genomes_project 1 6023980 6025149 - TEC TEC MGP_LPJ_T0023692.1 MGP_LPJ_G0016765.1 mouse_genomes_project 1 185118759 185145077 + MGP_LPJ_P0023692 1700016C15Rik protein_coding protein_coding MGP_LPJ_T0012218.1 MGP_LPJ_G0010309.1 mouse_genomes_project 1 125706878 125707343 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100032.1 MGP_LPJ_G0038295.1 mouse_genomes_project 1 167376763 167376825 + Gm22489 snoRNA snoRNA MGP_LPJ_T0006021.1 MGP_LPJ_G0005046.1 mouse_genomes_project 1 185020228 185021630 - 2310043L19Rik lincRNA lincRNA MGP_LPJ_T0000654.1 MGP_LPJ_G0000589.1 mouse_genomes_project 1 134387315 134390002 + TEC TEC MGP_LPJ_T0000513.1 MGP_LPJ_G0000448.1 mouse_genomes_project 1 57665609 57667447 + TEC TEC MGP_LPJ_T0000401.1 MGP_LPJ_G0000339.1 mouse_genomes_project 1 5909429 5912860 - TEC TEC MGP_LPJ_T0018694.1 MGP_LPJ_G0015733.1 mouse_genomes_project 1 2816783 2819629 + Oprk1 protein_coding retained_intron MGP_LPJ_T0018695.1 MGP_LPJ_G0015733.1 mouse_genomes_project 1 2816810 2834460 + MGP_LPJ_P0018695 Oprk1 protein_coding protein_coding MGP_LPJ_T0018696.1 MGP_LPJ_G0015733.1 mouse_genomes_project 1 2816874 2831195 + MGP_LPJ_P0018696 Oprk1 protein_coding protein_coding MGP_LPJ_T0018697.1 MGP_LPJ_G0015733.1 mouse_genomes_project 1 2817258 2832343 + MGP_LPJ_P0018697 Oprk1 protein_coding protein_coding MGP_LPJ_T0018698.1 MGP_LPJ_G0015733.1 mouse_genomes_project 1 2824799 2831482 + Oprk1 protein_coding retained_intron MGP_LPJ_T0005891.1 MGP_LPJ_G0004941.1 mouse_genomes_project 1 117071648 117072555 + Gm28189 lincRNA lincRNA MGP_LPJ_T0098803.1 MGP_LPJ_G0037066.1 mouse_genomes_project 1 179792907 179793004 - Gm24817 snRNA snRNA MGP_LPJ_T0012174.1 MGP_LPJ_G0010265.1 mouse_genomes_project 1 110309266 110310842 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023733.1 MGP_LPJ_G0016777.1 mouse_genomes_project 1 187313161 187334647 + MGP_LPJ_P0023733 Sccpdh protein_coding protein_coding MGP_LPJ_T0023734.1 MGP_LPJ_G0016777.1 mouse_genomes_project 1 187313161 187334647 + MGP_LPJ_P0023734 Sccpdh protein_coding nonsense_mediated_decay MGP_LPJ_T0023735.1 MGP_LPJ_G0016777.1 mouse_genomes_project 1 187313211 187323512 + Sccpdh protein_coding retained_intron MGP_LPJ_T0023736.1 MGP_LPJ_G0016777.1 mouse_genomes_project 1 187328036 187334283 + MGP_LPJ_P0023736 Sccpdh protein_coding protein_coding MGP_LPJ_T0023737.1 MGP_LPJ_G0016777.1 mouse_genomes_project 1 187328065 187331949 + MGP_LPJ_P0023737 Sccpdh protein_coding protein_coding MGP_LPJ_T0023738.1 MGP_LPJ_G0016777.1 mouse_genomes_project 1 187331302 187334291 + Sccpdh protein_coding retained_intron MGP_LPJ_T0002933.1 MGP_LPJ_G0002761.1 mouse_genomes_project 1 156306081 156350853 + antisense antisense MGP_LPJ_T0000746.1 MGP_LPJ_G0000679.1 mouse_genomes_project 1 166909534 166910683 - TEC TEC MGP_LPJ_T0011983.1 MGP_LPJ_G0010074.1 mouse_genomes_project 1 37513685 37514214 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099991.1 MGP_LPJ_G0038254.1 mouse_genomes_project 1 68073604 68073734 + Gm25832 snoRNA snoRNA MGP_LPJ_T0022638.1 MGP_LPJ_G0016525.1 mouse_genomes_project 1 160220065 160224544 + MGP_LPJ_P0022638 Zfp648 protein_coding protein_coding MGP_LPJ_T0024278.1 MGP_LPJ_G0016882.1 mouse_genomes_project 1 203262510 203286627 + MGP_LPJ_P0024278 Cd34 protein_coding protein_coding MGP_LPJ_T0024279.1 MGP_LPJ_G0016882.1 mouse_genomes_project 1 203262566 203286627 + MGP_LPJ_P0024279 Cd34 protein_coding protein_coding MGP_LPJ_T0024280.1 MGP_LPJ_G0016882.1 mouse_genomes_project 1 203262596 203274435 + Cd34 protein_coding retained_intron MGP_LPJ_T0024281.1 MGP_LPJ_G0016882.1 mouse_genomes_project 1 203262642 203264921 + Cd34 protein_coding retained_intron MGP_LPJ_T0024282.1 MGP_LPJ_G0016882.1 mouse_genomes_project 1 203262686 203283898 + MGP_LPJ_P0024282 Cd34 protein_coding nonsense_mediated_decay MGP_LPJ_T0023592.1 MGP_LPJ_G0016736.1 mouse_genomes_project 1 181171723 181174167 + MGP_LPJ_P0023592 Olfr433 protein_coding protein_coding MGP_LPJ_T0099987.1 MGP_LPJ_G0038250.1 mouse_genomes_project 1 64206097 64206175 + Gm26457 snoRNA snoRNA MGP_LPJ_T0022041.1 MGP_LPJ_G0016400.1 mouse_genomes_project 1 138089927 138147751 + MGP_LPJ_P0022041 Plekha6 protein_coding protein_coding MGP_LPJ_T0022042.1 MGP_LPJ_G0016400.1 mouse_genomes_project 1 138100046 138147465 + MGP_LPJ_P0022042 Plekha6 protein_coding protein_coding MGP_LPJ_T0022043.1 MGP_LPJ_G0016400.1 mouse_genomes_project 1 138102048 138145532 + MGP_LPJ_P0022043 Plekha6 protein_coding protein_coding MGP_LPJ_T0022044.1 MGP_LPJ_G0016400.1 mouse_genomes_project 1 138113647 138116526 + Plekha6 protein_coding processed_transcript MGP_LPJ_T0022045.1 MGP_LPJ_G0016400.1 mouse_genomes_project 1 138118439 138126003 + MGP_LPJ_P0022045 Plekha6 protein_coding protein_coding MGP_LPJ_T0022046.1 MGP_LPJ_G0016400.1 mouse_genomes_project 1 138118445 138129149 + MGP_LPJ_P0022046 Plekha6 protein_coding protein_coding MGP_LPJ_T0022047.1 MGP_LPJ_G0016400.1 mouse_genomes_project 1 138136065 138138542 + Plekha6 protein_coding retained_intron MGP_LPJ_T0022048.1 MGP_LPJ_G0016400.1 mouse_genomes_project 1 138142266 138145933 + Plekha6 protein_coding retained_intron MGP_LPJ_T0000791.1 MGP_LPJ_G0000724.1 mouse_genomes_project 1 184583348 184584144 - TEC TEC MGP_LPJ_T0024252.1 MGP_LPJ_G0016877.1 mouse_genomes_project 1 201474589 201475828 + Lamb3 protein_coding retained_intron MGP_LPJ_T0024253.1 MGP_LPJ_G0016877.1 mouse_genomes_project 1 201474615 201620026 + MGP_LPJ_P0024253 Lamb3 protein_coding protein_coding MGP_LPJ_T0024254.1 MGP_LPJ_G0016877.1 mouse_genomes_project 1 201474622 201601116 + MGP_LPJ_P0024254 Lamb3 protein_coding protein_coding MGP_LPJ_T0024255.1 MGP_LPJ_G0016877.1 mouse_genomes_project 1 201474640 201522996 + Lamb3 protein_coding processed_transcript MGP_LPJ_T0024263.1 MGP_LPJ_G0016877.1 mouse_genomes_project 1 201543841 201555839 + Lamb3 protein_coding processed_transcript MGP_LPJ_T0024265.1 MGP_LPJ_G0016877.1 mouse_genomes_project 1 201577160 201620026 + MGP_LPJ_P0024265 Lamb3 protein_coding protein_coding MGP_LPJ_T0024266.1 MGP_LPJ_G0016877.1 mouse_genomes_project 1 201577388 201578543 + Lamb3 protein_coding processed_transcript MGP_LPJ_T0024267.1 MGP_LPJ_G0016877.1 mouse_genomes_project 1 201577410 201620023 + MGP_LPJ_P0024267 Lamb3 protein_coding protein_coding MGP_LPJ_T0024268.1 MGP_LPJ_G0016877.1 mouse_genomes_project 1 201595818 201601115 + Lamb3 protein_coding processed_transcript MGP_LPJ_T0022647.1 MGP_LPJ_G0016528.1 mouse_genomes_project 1 161179489 161202586 - MGP_LPJ_P0022647 Mr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0022648.1 MGP_LPJ_G0016528.1 mouse_genomes_project 1 161180089 161187513 - Mr1 protein_coding retained_intron MGP_LPJ_T0022649.1 MGP_LPJ_G0016528.1 mouse_genomes_project 1 161180093 161202565 - MGP_LPJ_P0022649 Mr1 protein_coding protein_coding MGP_LPJ_T0022650.1 MGP_LPJ_G0016528.1 mouse_genomes_project 1 161182331 161202586 - MGP_LPJ_P0022650 Mr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0022651.1 MGP_LPJ_G0016528.1 mouse_genomes_project 1 161189281 161202596 - Mr1 protein_coding retained_intron MGP_LPJ_T0012165.1 MGP_LPJ_G0010256.1 mouse_genomes_project 1 107804048 107804516 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023594.1 MGP_LPJ_G0016738.1 mouse_genomes_project 1 181200616 181201570 + MGP_LPJ_P0023594 Olfr430 protein_coding protein_coding MGP_LPJ_T0024021.1 MGP_LPJ_G0016835.1 mouse_genomes_project 1 194582423 194674478 - MGP_LPJ_P0024021 Tgfb2 protein_coding protein_coding MGP_LPJ_T0024022.1 MGP_LPJ_G0016835.1 mouse_genomes_project 1 194583850 194674189 - MGP_LPJ_P0024022 Tgfb2 protein_coding protein_coding MGP_LPJ_T0024023.1 MGP_LPJ_G0016835.1 mouse_genomes_project 1 194585211 194613953 - Tgfb2 protein_coding retained_intron MGP_LPJ_T0024024.1 MGP_LPJ_G0016835.1 mouse_genomes_project 1 194590077 194614019 - Tgfb2 protein_coding retained_intron MGP_LPJ_T0024025.1 MGP_LPJ_G0016835.1 mouse_genomes_project 1 194593955 194633222 - Tgfb2 protein_coding processed_transcript MGP_LPJ_T0024026.1 MGP_LPJ_G0016835.1 mouse_genomes_project 1 194656896 194672822 - Tgfb2 protein_coding processed_transcript MGP_LPJ_T0002991.1 MGP_LPJ_G0002808.1 mouse_genomes_project 1 190308231 190317011 + Gm37885 antisense antisense MGP_LPJ_T0002992.1 MGP_LPJ_G0002808.1 mouse_genomes_project 1 190314566 190316139 + Gm37885 antisense antisense MGP_LPJ_T0011995.1 MGP_LPJ_G0010086.1 mouse_genomes_project 1 43373415 43373595 - processed_pseudogene processed_pseudogene MGP_LPJ_T0019620.1 MGP_LPJ_G0015914.1 mouse_genomes_project 1 50066244 50066862 - MGP_LPJ_P0019620 protein_coding protein_coding MGP_LPJ_T0012027.1 MGP_LPJ_G0010118.1 mouse_genomes_project 1 50066136 50066862 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023851.1 MGP_LPJ_G0016798.1 mouse_genomes_project 1 188829841 188890863 - MGP_LPJ_P0023851 Nvl protein_coding protein_coding MGP_LPJ_T0023852.1 MGP_LPJ_G0016798.1 mouse_genomes_project 1 188834450 188836639 - Nvl protein_coding processed_transcript MGP_LPJ_T0023853.1 MGP_LPJ_G0016798.1 mouse_genomes_project 1 188836129 188838471 - Nvl protein_coding retained_intron MGP_LPJ_T0023854.1 MGP_LPJ_G0016798.1 mouse_genomes_project 1 188838927 188849672 - Nvl protein_coding retained_intron MGP_LPJ_T0023855.1 MGP_LPJ_G0016798.1 mouse_genomes_project 1 188882449 188884932 - Nvl protein_coding retained_intron MGP_LPJ_T0021843.1 MGP_LPJ_G0016356.1 mouse_genomes_project 1 135377066 135425692 - MGP_LPJ_P0021843 Gm29427 protein_coding nonsense_mediated_decay MGP_LPJ_T0099974.1 MGP_LPJ_G0038237.1 mouse_genomes_project 1 42168382 42168516 - Gm23126 snoRNA snoRNA MGP_LPJ_T0002955.1 MGP_LPJ_G0002779.1 mouse_genomes_project 1 168655119 168663033 + Dnm3os antisense antisense MGP_LPJ_T0002956.1 MGP_LPJ_G0002779.1 mouse_genomes_project 1 168655119 168663031 + Dnm3os antisense antisense MGP_LPJ_T0002957.1 MGP_LPJ_G0002779.1 mouse_genomes_project 1 168655160 168659596 + Dnm3os antisense antisense MGP_LPJ_T0098796.1 MGP_LPJ_G0037059.1 mouse_genomes_project 1 176529016 176529123 - Gm22114 snRNA snRNA MGP_LPJ_T0000579.1 MGP_LPJ_G0000514.1 mouse_genomes_project 1 86901284 86903312 - TEC TEC MGP_LPJ_T0009481.1 MGP_LPJ_G0007599.1 mouse_genomes_project 1 5975866 5975976 - Gm23358 miRNA miRNA MGP_LPJ_T0000739.1 MGP_LPJ_G0000672.1 mouse_genomes_project 1 164755968 164759079 - TEC TEC MGP_LPJ_T0022278.1 MGP_LPJ_G0016452.1 mouse_genomes_project 1 141032371 141061344 + MGP_LPJ_P0022278 Tmem9 protein_coding protein_coding MGP_LPJ_T0022279.1 MGP_LPJ_G0016452.1 mouse_genomes_project 1 141043865 141062419 + MGP_LPJ_P0022279 Tmem9 protein_coding protein_coding MGP_LPJ_T0022280.1 MGP_LPJ_G0016452.1 mouse_genomes_project 1 141043960 141061369 + MGP_LPJ_P0022280 Tmem9 protein_coding protein_coding MGP_LPJ_T0022281.1 MGP_LPJ_G0016452.1 mouse_genomes_project 1 141052776 141061476 + Tmem9 protein_coding retained_intron MGP_LPJ_T0022282.1 MGP_LPJ_G0016452.1 mouse_genomes_project 1 141060344 141061857 + Tmem9 protein_coding processed_transcript MGP_LPJ_T0012281.1 MGP_LPJ_G0010372.1 mouse_genomes_project 1 155792071 155792673 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009531.1 MGP_LPJ_G0007649.1 mouse_genomes_project 1 90446768 90446878 + Gm25198 miRNA miRNA MGP_LPJ_T0023588.1 MGP_LPJ_G0016733.1 mouse_genomes_project 1 181069602 181089115 - MGP_LPJ_P0023588 Ifi202b protein_coding protein_coding MGP_LPJ_T0012082.1 MGP_LPJ_G0010173.1 mouse_genomes_project 1 66587121 66587429 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098759.1 MGP_LPJ_G0037022.1 mouse_genomes_project 1 75897275 75897382 + Gm25524 snRNA snRNA MGP_LPJ_T0000813.1 MGP_LPJ_G0000744.1 mouse_genomes_project 1 192272542 192273297 + TEC TEC MGP_LPJ_T0024287.1 MGP_LPJ_G0016884.1 mouse_genomes_project 1 203406639 203444588 - MGP_LPJ_P0024287 Cr1l protein_coding protein_coding MGP_LPJ_T0024288.1 MGP_LPJ_G0016884.1 mouse_genomes_project 1 203407916 203444567 - MGP_LPJ_P0024288 Cr1l protein_coding protein_coding MGP_LPJ_T0024289.1 MGP_LPJ_G0016884.1 mouse_genomes_project 1 203414619 203419357 - Cr1l protein_coding retained_intron MGP_LPJ_T0024290.1 MGP_LPJ_G0016884.1 mouse_genomes_project 1 203414715 203444805 - MGP_LPJ_P0024290 Cr1l protein_coding protein_coding MGP_LPJ_T0024291.1 MGP_LPJ_G0016884.1 mouse_genomes_project 1 203414721 203430885 - MGP_LPJ_P0024291 Cr1l protein_coding protein_coding MGP_LPJ_T0024292.1 MGP_LPJ_G0016884.1 mouse_genomes_project 1 203427898 203442706 - Cr1l protein_coding retained_intron MGP_LPJ_T0024293.1 MGP_LPJ_G0016884.1 mouse_genomes_project 1 203428025 203444830 - MGP_LPJ_P0024293 Cr1l protein_coding protein_coding MGP_LPJ_T0024294.1 MGP_LPJ_G0016884.1 mouse_genomes_project 1 203439158 203444778 - Cr1l protein_coding retained_intron MGP_LPJ_T0024295.1 MGP_LPJ_G0016884.1 mouse_genomes_project 1 203442437 203444574 - MGP_LPJ_P0024295 Cr1l protein_coding nonsense_mediated_decay MGP_LPJ_T0024296.1 MGP_LPJ_G0016884.1 mouse_genomes_project 1 203442889 203444599 - Cr1l protein_coding retained_intron MGP_LPJ_T0022327.1 MGP_LPJ_G0016462.1 mouse_genomes_project 1 141682649 141687802 + MGP_LPJ_P0022327 Zfp281 protein_coding protein_coding MGP_LPJ_T0022328.1 MGP_LPJ_G0016462.1 mouse_genomes_project 1 141682649 141687802 + MGP_LPJ_P0022328 Zfp281 protein_coding protein_coding MGP_LPJ_T0022121.1 MGP_LPJ_G0016419.1 mouse_genomes_project 1 139115257 139123041 + MGP_LPJ_P0022121 Mybph protein_coding protein_coding MGP_LPJ_T0022122.1 MGP_LPJ_G0016419.1 mouse_genomes_project 1 139115266 139123042 + MGP_LPJ_P0022122 Mybph protein_coding protein_coding MGP_LPJ_T0020533.1 MGP_LPJ_G0016088.1 mouse_genomes_project 1 76854812 76857792 + Zfand2b protein_coding retained_intron MGP_LPJ_T0020534.1 MGP_LPJ_G0016088.1 mouse_genomes_project 1 76854812 76857796 + MGP_LPJ_P0020534 Zfand2b protein_coding protein_coding MGP_LPJ_T0020535.1 MGP_LPJ_G0016088.1 mouse_genomes_project 1 76854812 76856919 + MGP_LPJ_P0020535 Zfand2b protein_coding protein_coding MGP_LPJ_T0020536.1 MGP_LPJ_G0016088.1 mouse_genomes_project 1 76854821 76857792 + MGP_LPJ_P0020536 Zfand2b protein_coding protein_coding MGP_LPJ_T0020537.1 MGP_LPJ_G0016088.1 mouse_genomes_project 1 76854824 76856059 + Zfand2b protein_coding retained_intron MGP_LPJ_T0020538.1 MGP_LPJ_G0016088.1 mouse_genomes_project 1 76854832 76855798 + Zfand2b protein_coding retained_intron MGP_LPJ_T0020539.1 MGP_LPJ_G0016088.1 mouse_genomes_project 1 76854867 76856736 + Zfand2b protein_coding retained_intron MGP_LPJ_T0020540.1 MGP_LPJ_G0016088.1 mouse_genomes_project 1 76854944 76856854 + Zfand2b protein_coding retained_intron MGP_LPJ_T0020541.1 MGP_LPJ_G0016088.1 mouse_genomes_project 1 76855094 76857569 + MGP_LPJ_P0020541 Zfand2b protein_coding protein_coding MGP_LPJ_T0000461.1 MGP_LPJ_G0000397.1 mouse_genomes_project 1 29322844 29325727 - TEC TEC MGP_LPJ_T0021912.1 MGP_LPJ_G0016373.1 mouse_genomes_project 1 136271686 136283658 + MGP_LPJ_P0021912 Fam72a protein_coding protein_coding MGP_LPJ_T0023235.1 MGP_LPJ_G0016642.1 mouse_genomes_project 1 176886092 176922621 - MGP_LPJ_P0023235 Uap1 protein_coding protein_coding MGP_LPJ_T0023236.1 MGP_LPJ_G0016642.1 mouse_genomes_project 1 176886157 176922610 - MGP_LPJ_P0023236 Uap1 protein_coding protein_coding MGP_LPJ_T0023237.1 MGP_LPJ_G0016642.1 mouse_genomes_project 1 176886158 176922610 - MGP_LPJ_P0023237 Uap1 protein_coding protein_coding MGP_LPJ_T0023238.1 MGP_LPJ_G0016642.1 mouse_genomes_project 1 176886189 176887869 - Uap1 protein_coding retained_intron MGP_LPJ_T0023239.1 MGP_LPJ_G0016642.1 mouse_genomes_project 1 176893797 176922456 - Uap1 protein_coding retained_intron MGP_LPJ_T0023240.1 MGP_LPJ_G0016642.1 mouse_genomes_project 1 176906357 176906933 - Uap1 protein_coding processed_transcript MGP_LPJ_T0023241.1 MGP_LPJ_G0016642.1 mouse_genomes_project 1 176906375 176922430 - Uap1 protein_coding processed_transcript MGP_LPJ_T0023242.1 MGP_LPJ_G0016642.1 mouse_genomes_project 1 176911310 176922453 - Uap1 protein_coding retained_intron MGP_LPJ_T0023243.1 MGP_LPJ_G0016642.1 mouse_genomes_project 1 176916689 176922550 - Uap1 protein_coding processed_transcript MGP_LPJ_T0006001.1 MGP_LPJ_G0005027.1 mouse_genomes_project 1 172285585 172286848 + Gm37073 lincRNA lincRNA MGP_LPJ_T0022189.1 MGP_LPJ_G0016434.1 mouse_genomes_project 1 139955127 140084021 - MGP_LPJ_P0022189 Lgr6 protein_coding protein_coding MGP_LPJ_T0022190.1 MGP_LPJ_G0016434.1 mouse_genomes_project 1 139958762 140083747 - MGP_LPJ_P0022190 Lgr6 protein_coding protein_coding MGP_LPJ_T0022191.1 MGP_LPJ_G0016434.1 mouse_genomes_project 1 139974949 139993765 - Lgr6 protein_coding processed_transcript MGP_LPJ_T0011885.1 MGP_LPJ_G0009976.1 mouse_genomes_project 1 4971336 4973432 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005810.1 MGP_LPJ_G0004874.1 mouse_genomes_project 1 75162792 75166323 - C530043A13Rik lincRNA lincRNA MGP_LPJ_T0005811.1 MGP_LPJ_G0004874.1 mouse_genomes_project 1 75162794 75166156 - C530043A13Rik lincRNA lincRNA MGP_LPJ_T0005812.1 MGP_LPJ_G0004874.1 mouse_genomes_project 1 75163894 75170489 - C530043A13Rik lincRNA lincRNA MGP_LPJ_T0000400.1 MGP_LPJ_G0000338.1 mouse_genomes_project 1 5827795 5830329 - TEC TEC MGP_LPJ_T0023124.1 MGP_LPJ_G0016616.1 mouse_genomes_project 1 172349297 172446662 + MGP_LPJ_P0023124 Cd247 protein_coding protein_coding MGP_LPJ_T0023125.1 MGP_LPJ_G0016616.1 mouse_genomes_project 1 172349297 172446662 + MGP_LPJ_P0023125 Cd247 protein_coding protein_coding MGP_LPJ_T0023126.1 MGP_LPJ_G0016616.1 mouse_genomes_project 1 172349297 172446662 + MGP_LPJ_P0023126 Cd247 protein_coding protein_coding MGP_LPJ_T0023127.1 MGP_LPJ_G0016616.1 mouse_genomes_project 1 172349305 172435964 + MGP_LPJ_P0023127 Cd247 protein_coding protein_coding MGP_LPJ_T0023128.1 MGP_LPJ_G0016616.1 mouse_genomes_project 1 172349339 172442945 + MGP_LPJ_P0023128 Cd247 protein_coding protein_coding MGP_LPJ_T0023129.1 MGP_LPJ_G0016616.1 mouse_genomes_project 1 172349381 172444603 + MGP_LPJ_P0023129 Cd247 protein_coding nonsense_mediated_decay MGP_LPJ_T0023130.1 MGP_LPJ_G0016616.1 mouse_genomes_project 1 172349381 172445758 + MGP_LPJ_P0023130 Cd247 protein_coding protein_coding MGP_LPJ_T0023131.1 MGP_LPJ_G0016616.1 mouse_genomes_project 1 172432113 172435453 + Cd247 protein_coding retained_intron MGP_LPJ_T0023132.1 MGP_LPJ_G0016616.1 mouse_genomes_project 1 172440163 172452784 + Cd247 protein_coding processed_transcript MGP_LPJ_T0011942.1 MGP_LPJ_G0010033.1 mouse_genomes_project 1 24622479 24623130 + processed_pseudogene processed_pseudogene MGP_LPJ_T0022605.1 MGP_LPJ_G0016517.1 mouse_genomes_project 1 159611892 159666246 + MGP_LPJ_P0022605 Rgs8 protein_coding protein_coding MGP_LPJ_T0022606.1 MGP_LPJ_G0016517.1 mouse_genomes_project 1 159620997 159657010 + MGP_LPJ_P0022606 Rgs8 protein_coding protein_coding MGP_LPJ_T0022607.1 MGP_LPJ_G0016517.1 mouse_genomes_project 1 159625638 159658939 + MGP_LPJ_P0022607 Rgs8 protein_coding protein_coding MGP_LPJ_T0022608.1 MGP_LPJ_G0016517.1 mouse_genomes_project 1 159627575 159658731 + MGP_LPJ_P0022608 Rgs8 protein_coding protein_coding MGP_LPJ_T0022609.1 MGP_LPJ_G0016517.1 mouse_genomes_project 1 159627613 159661489 + MGP_LPJ_P0022609 Rgs8 protein_coding protein_coding MGP_LPJ_T0022610.1 MGP_LPJ_G0016517.1 mouse_genomes_project 1 159627894 159657060 + MGP_LPJ_P0022610 Rgs8 protein_coding protein_coding MGP_LPJ_T0022611.1 MGP_LPJ_G0016517.1 mouse_genomes_project 1 159627958 159657065 + MGP_LPJ_P0022611 Rgs8 protein_coding protein_coding MGP_LPJ_T0022612.1 MGP_LPJ_G0016517.1 mouse_genomes_project 1 159627974 159658900 + MGP_LPJ_P0022612 Rgs8 protein_coding protein_coding MGP_LPJ_T0022613.1 MGP_LPJ_G0016517.1 mouse_genomes_project 1 159628010 159663590 + MGP_LPJ_P0022613 Rgs8 protein_coding protein_coding MGP_LPJ_T0022614.1 MGP_LPJ_G0016517.1 mouse_genomes_project 1 159629787 159634265 + Rgs8 protein_coding processed_transcript MGP_LPJ_T0023955.1 MGP_LPJ_G0016819.1 mouse_genomes_project 1 191165573 191185066 - MGP_LPJ_P0023955 protein_coding protein_coding MGP_LPJ_T0023956.1 MGP_LPJ_G0016819.1 mouse_genomes_project 1 191165675 191173295 - MGP_LPJ_P0023956 protein_coding protein_coding MGP_LPJ_T0023957.1 MGP_LPJ_G0016819.1 mouse_genomes_project 1 191166044 191185066 - MGP_LPJ_P0023957 protein_coding unknown_likely_coding MGP_LPJ_T0023958.1 MGP_LPJ_G0016819.1 mouse_genomes_project 1 191174287 191177937 - MGP_LPJ_P0023958 protein_coding protein_coding MGP_LPJ_T0023959.1 MGP_LPJ_G0016819.1 mouse_genomes_project 1 191183501 191190878 - protein_coding retained_intron MGP_LPJ_T0023960.1 MGP_LPJ_G0016819.1 mouse_genomes_project 1 191183997 191190856 - MGP_LPJ_P0023960 protein_coding protein_coding MGP_LPJ_T0023961.1 MGP_LPJ_G0016819.1 mouse_genomes_project 1 191190510 191209166 - MGP_LPJ_P0023961 protein_coding unknown_likely_coding MGP_LPJ_T0023962.1 MGP_LPJ_G0016819.1 mouse_genomes_project 1 191198235 191209190 - MGP_LPJ_P0023962 protein_coding protein_coding MGP_LPJ_T0000572.1 MGP_LPJ_G0000507.1 mouse_genomes_project 1 84844086 84845132 - TEC TEC MGP_LPJ_T0099979.1 MGP_LPJ_G0038242.1 mouse_genomes_project 1 58137177 58137307 - Gm22371 snoRNA snoRNA MGP_LPJ_T0024218.1 MGP_LPJ_G0016873.1 mouse_genomes_project 1 201353111 201376727 - MGP_LPJ_P0024218 Diexf protein_coding protein_coding MGP_LPJ_T0024219.1 MGP_LPJ_G0016873.1 mouse_genomes_project 1 201354573 201379609 - MGP_LPJ_P0024219 Diexf protein_coding protein_coding MGP_LPJ_T0024220.1 MGP_LPJ_G0016873.1 mouse_genomes_project 1 201366453 201394759 - MGP_LPJ_P0024220 Diexf protein_coding protein_coding MGP_LPJ_T0024221.1 MGP_LPJ_G0016873.1 mouse_genomes_project 1 201366469 201394731 - MGP_LPJ_P0024221 Diexf protein_coding nonsense_mediated_decay MGP_LPJ_T0024222.1 MGP_LPJ_G0016873.1 mouse_genomes_project 1 201369804 201377430 - Diexf protein_coding retained_intron MGP_LPJ_T0024223.1 MGP_LPJ_G0016873.1 mouse_genomes_project 1 201382529 201384523 - Diexf protein_coding retained_intron MGP_LPJ_T0024224.1 MGP_LPJ_G0016873.1 mouse_genomes_project 1 201382694 201392832 - Diexf protein_coding processed_transcript MGP_LPJ_T0024225.1 MGP_LPJ_G0016873.1 mouse_genomes_project 1 201384093 201394694 - MGP_LPJ_P0024225 Diexf protein_coding nonsense_mediated_decay MGP_LPJ_T0024226.1 MGP_LPJ_G0016873.1 mouse_genomes_project 1 201384111 201385860 - Diexf protein_coding processed_transcript MGP_LPJ_T0011951.1 MGP_LPJ_G0010042.1 mouse_genomes_project 1 29471504 29472263 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023073.1 MGP_LPJ_G0016604.1 mouse_genomes_project 1 171338100 171365684 + MGP_LPJ_P0023073 Dpt protein_coding protein_coding MGP_LPJ_T0012211.1 MGP_LPJ_G0010302.1 mouse_genomes_project 1 123899080 123899790 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000453.1 MGP_LPJ_G0000389.1 mouse_genomes_project 1 23865484 23868894 - TEC TEC MGP_LPJ_T0100041.1 MGP_LPJ_G0038304.1 mouse_genomes_project 1 169518079 169518213 - Gm22671 snoRNA snoRNA MGP_LPJ_T0098465.1 MGP_LPJ_G0036745.1 mouse_genomes_project 1 171995516 171998591 - Gm37864 sense_intronic sense_intronic MGP_LPJ_T0009574.1 MGP_LPJ_G0007692.1 mouse_genomes_project 1 192676503 192676585 - Mir1981 miRNA miRNA MGP_LPJ_T0023509.1 MGP_LPJ_G0016701.1 mouse_genomes_project 1 179270543 179279211 - MGP_LPJ_P0023509 Kcnj9 protein_coding protein_coding MGP_LPJ_T0023510.1 MGP_LPJ_G0016701.1 mouse_genomes_project 1 179272142 179279175 - MGP_LPJ_P0023510 Kcnj9 protein_coding protein_coding MGP_LPJ_T0023511.1 MGP_LPJ_G0016701.1 mouse_genomes_project 1 179275198 179278000 - Kcnj9 protein_coding retained_intron MGP_LPJ_T0002893.1 MGP_LPJ_G0002731.1 mouse_genomes_project 1 109961880 109978927 + D630008O14Rik antisense antisense MGP_LPJ_T0002894.1 MGP_LPJ_G0002731.1 mouse_genomes_project 1 109961880 109995410 + D630008O14Rik antisense antisense MGP_LPJ_T0000563.1 MGP_LPJ_G0000498.1 mouse_genomes_project 1 82209359 82210526 - TEC TEC MGP_LPJ_T0100006.1 MGP_LPJ_G0038269.1 mouse_genomes_project 1 106477947 106478089 - Gm23965 snoRNA snoRNA MGP_LPJ_T0000758.1 MGP_LPJ_G0000691.1 mouse_genomes_project 1 168924867 168927131 + TEC TEC MGP_LPJ_T0098097.1 MGP_LPJ_G0036378.1 mouse_genomes_project 1 167928285 167928403 - Gm25488 rRNA rRNA MGP_LPJ_T0002820.1 MGP_LPJ_G0002676.1 mouse_genomes_project 1 39934061 39948896 + Gm37915 antisense antisense MGP_LPJ_T0000801.1 MGP_LPJ_G0000733.1 mouse_genomes_project 1 188167502 188171235 - TEC TEC MGP_LPJ_T0005775.1 MGP_LPJ_G0004849.1 mouse_genomes_project 1 62443811 62444889 + Gm28449 lincRNA lincRNA MGP_LPJ_T0005720.1 MGP_LPJ_G0004813.1 mouse_genomes_project 1 41486460 41487843 + Gm9915 lincRNA lincRNA MGP_LPJ_T0005721.1 MGP_LPJ_G0004813.1 mouse_genomes_project 1 41486461 41487843 + Gm9915 lincRNA lincRNA MGP_LPJ_T0020423.1 MGP_LPJ_G0016066.1 mouse_genomes_project 1 76115364 76143663 + MGP_LPJ_P0020423 Vil1 protein_coding protein_coding MGP_LPJ_T0020424.1 MGP_LPJ_G0016066.1 mouse_genomes_project 1 76127082 76131047 + MGP_LPJ_P0020424 Vil1 protein_coding protein_coding MGP_LPJ_T0020425.1 MGP_LPJ_G0016066.1 mouse_genomes_project 1 76129445 76131040 + Vil1 protein_coding retained_intron MGP_LPJ_T0020426.1 MGP_LPJ_G0016066.1 mouse_genomes_project 1 76131710 76133990 + Vil1 protein_coding retained_intron MGP_LPJ_T0023637.1 MGP_LPJ_G0016756.1 mouse_genomes_project 1 182977268 182983851 - MGP_LPJ_P0023637 Chml protein_coding protein_coding MGP_LPJ_T0000840.1 MGP_LPJ_G0000770.1 mouse_genomes_project 1 203045489 203046021 + TEC TEC MGP_LPJ_T0021669.1 MGP_LPJ_G0016318.1 mouse_genomes_project 1 124024784 124030102 - MGP_LPJ_P0021669 Tmem177 protein_coding protein_coding MGP_LPJ_T0002899.1 MGP_LPJ_G0002735.1 mouse_genomes_project 1 132324576 132346223 - 2900009J06Rik antisense antisense MGP_LPJ_T0002900.1 MGP_LPJ_G0002735.1 mouse_genomes_project 1 132324576 132346261 - 2900009J06Rik antisense antisense MGP_LPJ_T0011267.1 MGP_LPJ_G0009385.1 mouse_genomes_project 1 88100751 88101002 + Gm22906 misc_RNA misc_RNA MGP_LPJ_T0098081.1 MGP_LPJ_G0036362.1 mouse_genomes_project 1 35941037 35941156 + n-R5s210 rRNA rRNA MGP_LPJ_T0012250.1 MGP_LPJ_G0010341.1 mouse_genomes_project 1 143299295 143299779 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000478.1 MGP_LPJ_G0000413.1 mouse_genomes_project 1 33598178 33601210 + TEC TEC MGP_LPJ_T0100004.1 MGP_LPJ_G0038267.1 mouse_genomes_project 1 105632640 105632739 - Gm23036 snoRNA snoRNA MGP_LPJ_T0021262.1 MGP_LPJ_G0016229.1 mouse_genomes_project 1 94526324 94576145 + MGP_LPJ_P0021262 Twist2 protein_coding protein_coding MGP_LPJ_T0021263.1 MGP_LPJ_G0016229.1 mouse_genomes_project 1 94526333 94528858 + MGP_LPJ_P0021263 Twist2 protein_coding protein_coding MGP_LPJ_T0000515.1 MGP_LPJ_G0000450.1 mouse_genomes_project 1 60310715 60312353 - TEC TEC MGP_LPJ_T0023329.1 MGP_LPJ_G0016666.1 mouse_genomes_project 1 178136578 178137270 - Ndufs2 protein_coding retained_intron MGP_LPJ_T0023330.1 MGP_LPJ_G0016666.1 mouse_genomes_project 1 178136578 178151416 - Ndufs2 protein_coding retained_intron MGP_LPJ_T0023331.1 MGP_LPJ_G0016666.1 mouse_genomes_project 1 178136578 178139256 - Ndufs2 protein_coding processed_transcript MGP_LPJ_T0023332.1 MGP_LPJ_G0016666.1 mouse_genomes_project 1 178136578 178151416 - MGP_LPJ_P0023332 Ndufs2 protein_coding protein_coding MGP_LPJ_T0023333.1 MGP_LPJ_G0016666.1 mouse_genomes_project 1 178136578 178151416 - MGP_LPJ_P0023333 Ndufs2 protein_coding protein_coding MGP_LPJ_T0023334.1 MGP_LPJ_G0016666.1 mouse_genomes_project 1 178138872 178141772 - Ndufs2 protein_coding processed_transcript MGP_LPJ_T0023335.1 MGP_LPJ_G0016666.1 mouse_genomes_project 1 178140247 178155497 - MGP_LPJ_P0023335 Ndufs2 protein_coding protein_coding MGP_LPJ_T0023336.1 MGP_LPJ_G0016666.1 mouse_genomes_project 1 178140465 178155634 - MGP_LPJ_P0023336 Ndufs2 protein_coding protein_coding MGP_LPJ_T0021810.1 MGP_LPJ_G0016347.1 mouse_genomes_project 1 132870894 132916822 - MGP_LPJ_P0021810 Lct protein_coding protein_coding MGP_LPJ_T0021811.1 MGP_LPJ_G0016347.1 mouse_genomes_project 1 132873710 132878398 - Lct protein_coding retained_intron MGP_LPJ_T0022652.1 MGP_LPJ_G0016529.1 mouse_genomes_project 1 161216960 161270075 + MGP_LPJ_P0022652 Stx6 protein_coding protein_coding MGP_LPJ_T0022653.1 MGP_LPJ_G0016529.1 mouse_genomes_project 1 161216964 161266357 + MGP_LPJ_P0022653 Stx6 protein_coding nonsense_mediated_decay MGP_LPJ_T0022654.1 MGP_LPJ_G0016529.1 mouse_genomes_project 1 161216993 161262665 + MGP_LPJ_P0022654 Stx6 protein_coding protein_coding MGP_LPJ_T0022655.1 MGP_LPJ_G0016529.1 mouse_genomes_project 1 161217016 161255952 + Stx6 protein_coding processed_transcript MGP_LPJ_T0022656.1 MGP_LPJ_G0016529.1 mouse_genomes_project 1 161217044 161241731 + Stx6 protein_coding retained_intron MGP_LPJ_T0022657.1 MGP_LPJ_G0016529.1 mouse_genomes_project 1 161248600 161252766 + Stx6 protein_coding retained_intron MGP_LPJ_T0022658.1 MGP_LPJ_G0016529.1 mouse_genomes_project 1 161251808 161266435 + Stx6 protein_coding retained_intron MGP_LPJ_T0022659.1 MGP_LPJ_G0016529.1 mouse_genomes_project 1 161252205 161272669 + MGP_LPJ_P0022659 Stx6 protein_coding protein_coding MGP_LPJ_T0022660.1 MGP_LPJ_G0016529.1 mouse_genomes_project 1 161252253 161258175 + Stx6 protein_coding retained_intron MGP_LPJ_T0022661.1 MGP_LPJ_G0016529.1 mouse_genomes_project 1 161259437 161266660 + Stx6 protein_coding processed_transcript MGP_LPJ_T0009510.1 MGP_LPJ_G0007628.1 mouse_genomes_project 1 64226053 64227659 + miRNA miRNA MGP_LPJ_T0016953.1 MGP_LPJ_G0015020.1 mouse_genomes_project 1 90479949 90703196 - processed_transcript processed_transcript MGP_LPJ_T0016954.1 MGP_LPJ_G0015020.1 mouse_genomes_project 1 90694564 90703166 - processed_transcript processed_transcript MGP_LPJ_T0000702.1 MGP_LPJ_G0000635.1 mouse_genomes_project 1 146929768 146931040 + TEC TEC MGP_LPJ_T0012133.1 MGP_LPJ_G0010224.1 mouse_genomes_project 1 90452632 90454214 + processed_pseudogene processed_pseudogene MGP_LPJ_T0019398.1 MGP_LPJ_G0015865.1 mouse_genomes_project 1 37837429 37862604 - MGP_LPJ_P0019398 Lonrf2 protein_coding protein_coding MGP_LPJ_T0019399.1 MGP_LPJ_G0015865.1 mouse_genomes_project 1 37841272 37877815 - MGP_LPJ_P0019399 Lonrf2 protein_coding protein_coding MGP_LPJ_T0019400.1 MGP_LPJ_G0015865.1 mouse_genomes_project 1 37876583 37877761 - Lonrf2 protein_coding retained_intron MGP_LPJ_T0020083.1 MGP_LPJ_G0015998.1 mouse_genomes_project 1 63709573 63748561 + Nrp2 protein_coding retained_intron MGP_LPJ_T0020084.1 MGP_LPJ_G0015998.1 mouse_genomes_project 1 63709573 63830727 + MGP_LPJ_P0020084 Nrp2 protein_coding protein_coding MGP_LPJ_T0020085.1 MGP_LPJ_G0015998.1 mouse_genomes_project 1 63709573 63830727 + MGP_LPJ_P0020085 Nrp2 protein_coding protein_coding MGP_LPJ_T0020086.1 MGP_LPJ_G0015998.1 mouse_genomes_project 1 63709990 63830727 + MGP_LPJ_P0020086 Nrp2 protein_coding protein_coding MGP_LPJ_T0020087.1 MGP_LPJ_G0015998.1 mouse_genomes_project 1 63709990 63830727 + MGP_LPJ_P0020087 Nrp2 protein_coding protein_coding MGP_LPJ_T0020088.1 MGP_LPJ_G0015998.1 mouse_genomes_project 1 63709990 63807248 + MGP_LPJ_P0020088 Nrp2 protein_coding protein_coding MGP_LPJ_T0020089.1 MGP_LPJ_G0015998.1 mouse_genomes_project 1 63709990 63809575 + MGP_LPJ_P0020089 Nrp2 protein_coding protein_coding MGP_LPJ_T0098738.1 MGP_LPJ_G0037001.1 mouse_genomes_project 1 32698678 32698771 - Gm23792 snRNA snRNA MGP_LPJ_T0020420.1 MGP_LPJ_G0016065.1 mouse_genomes_project 1 76094456 76101502 + MGP_LPJ_P0020420 Ctdsp1 protein_coding protein_coding MGP_LPJ_T0020421.1 MGP_LPJ_G0016065.1 mouse_genomes_project 1 76094742 76101499 + Ctdsp1 protein_coding retained_intron MGP_LPJ_T0020422.1 MGP_LPJ_G0016065.1 mouse_genomes_project 1 76095109 76097017 + MGP_LPJ_P0020422 Ctdsp1 protein_coding protein_coding MGP_LPJ_T0023723.1 MGP_LPJ_G0016774.1 mouse_genomes_project 1 187171542 187191240 - MGP_LPJ_P0023723 Tfb2m protein_coding protein_coding MGP_LPJ_T0023725.1 MGP_LPJ_G0016774.1 mouse_genomes_project 1 187172493 187178131 - Tfb2m protein_coding processed_transcript MGP_LPJ_T0023726.1 MGP_LPJ_G0016774.1 mouse_genomes_project 1 187172854 187178276 - Tfb2m protein_coding processed_transcript MGP_LPJ_T0023727.1 MGP_LPJ_G0016774.1 mouse_genomes_project 1 187175791 187191190 - Tfb2m protein_coding processed_transcript MGP_LPJ_T0023728.1 MGP_LPJ_G0016774.1 mouse_genomes_project 1 187178118 187190753 - Tfb2m protein_coding processed_transcript MGP_LPJ_T0022065.1 MGP_LPJ_G0016406.1 mouse_genomes_project 1 138244849 138255765 - MGP_LPJ_P0022065 Sox13 protein_coding protein_coding MGP_LPJ_T0022066.1 MGP_LPJ_G0016406.1 mouse_genomes_project 1 138244849 138288878 - MGP_LPJ_P0022066 Sox13 protein_coding protein_coding MGP_LPJ_T0022067.1 MGP_LPJ_G0016406.1 mouse_genomes_project 1 138246197 138255817 - MGP_LPJ_P0022067 Sox13 protein_coding protein_coding MGP_LPJ_T0022068.1 MGP_LPJ_G0016406.1 mouse_genomes_project 1 138246524 138248073 - Sox13 protein_coding retained_intron MGP_LPJ_T0022069.1 MGP_LPJ_G0016406.1 mouse_genomes_project 1 138247083 138248981 - Sox13 protein_coding retained_intron MGP_LPJ_T0000569.1 MGP_LPJ_G0000504.1 mouse_genomes_project 1 83526252 83528257 - TEC TEC MGP_LPJ_T0005705.1 MGP_LPJ_G0004802.1 mouse_genomes_project 1 34873317 34881377 - Gm33222 lincRNA lincRNA MGP_LPJ_T0005706.1 MGP_LPJ_G0004802.1 mouse_genomes_project 1 34873400 34881323 - Gm33222 lincRNA lincRNA MGP_LPJ_T0099966.1 MGP_LPJ_G0038229.1 mouse_genomes_project 1 22600704 22600841 - Gm26418 snoRNA snoRNA MGP_LPJ_T0000538.1 MGP_LPJ_G0000473.1 mouse_genomes_project 1 68004652 68005791 - TEC TEC MGP_LPJ_T0012375.1 MGP_LPJ_G0010466.1 mouse_genomes_project 1 201757095 201757498 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005907.1 MGP_LPJ_G0004954.1 mouse_genomes_project 1 125032116 125033451 + Gm29347 lincRNA lincRNA MGP_LPJ_T0011972.1 MGP_LPJ_G0010063.1 mouse_genomes_project 1 33401210 33401856 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006054.1 MGP_LPJ_G0005067.1 mouse_genomes_project 1 192557031 192563512 + 4930488B22Rik lincRNA lincRNA MGP_LPJ_T0020993.1 MGP_LPJ_G0016172.1 mouse_genomes_project 1 89526694 89533309 + Akp3 protein_coding retained_intron MGP_LPJ_T0020994.1 MGP_LPJ_G0016172.1 mouse_genomes_project 1 89526729 89534073 + MGP_LPJ_P0020994 Akp3 protein_coding protein_coding MGP_LPJ_T0019935.1 MGP_LPJ_G0015973.1 mouse_genomes_project 1 59611287 59668402 + MGP_LPJ_P0019935 Casp8 protein_coding protein_coding MGP_LPJ_T0019936.1 MGP_LPJ_G0015973.1 mouse_genomes_project 1 59611390 59667653 + MGP_LPJ_P0019936 Casp8 protein_coding protein_coding MGP_LPJ_T0019937.1 MGP_LPJ_G0015973.1 mouse_genomes_project 1 59623272 59667907 + MGP_LPJ_P0019937 Casp8 protein_coding protein_coding MGP_LPJ_T0019938.1 MGP_LPJ_G0015973.1 mouse_genomes_project 1 59623423 59667653 + MGP_LPJ_P0019938 Casp8 protein_coding protein_coding MGP_LPJ_T0000648.1 MGP_LPJ_G0000583.1 mouse_genomes_project 1 132673833 132677716 - TEC TEC MGP_LPJ_T0024029.1 MGP_LPJ_G0016837.1 mouse_genomes_project 1 194947880 194951092 + MGP_LPJ_P0024029 D1Pas1 protein_coding protein_coding MGP_LPJ_T0099978.1 MGP_LPJ_G0038241.1 mouse_genomes_project 1 53062308 53062409 + Gm24349 snoRNA snoRNA MGP_LPJ_T0101715.1 MGP_LPJ_G0039753.1 mouse_genomes_project 1 135377118 135392037 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0000424.1 MGP_LPJ_G0000362.1 mouse_genomes_project 1 12423391 12427713 + TEC TEC MGP_LPJ_T0011876.1 MGP_LPJ_G0009967.1 mouse_genomes_project 1 4225454 4225484 + processed_pseudogene processed_pseudogene MGP_LPJ_T0020775.1 MGP_LPJ_G0016125.1 mouse_genomes_project 1 82150562 82167873 - MGP_LPJ_P0020775 Fam124b protein_coding protein_coding MGP_LPJ_T0020776.1 MGP_LPJ_G0016125.1 mouse_genomes_project 1 82152181 82172405 - Fam124b protein_coding processed_transcript MGP_LPJ_T0000698.1 MGP_LPJ_G0000631.1 mouse_genomes_project 1 144301427 144304024 + TEC TEC MGP_LPJ_T0021816.1 MGP_LPJ_G0016349.1 mouse_genomes_project 1 132956368 133010823 - MGP_LPJ_P0021816 Dars protein_coding protein_coding MGP_LPJ_T0021817.1 MGP_LPJ_G0016349.1 mouse_genomes_project 1 132967295 132971818 - Dars protein_coding retained_intron MGP_LPJ_T0021818.1 MGP_LPJ_G0016349.1 mouse_genomes_project 1 133005408 133010832 - MGP_LPJ_P0021818 Dars protein_coding protein_coding MGP_LPJ_T0022447.1 MGP_LPJ_G0016489.1 mouse_genomes_project 1 151923176 152358047 + MGP_LPJ_P0022447 Brinp3 protein_coding protein_coding MGP_LPJ_T0022448.1 MGP_LPJ_G0016489.1 mouse_genomes_project 1 151926032 152207869 + MGP_LPJ_P0022448 Brinp3 protein_coding protein_coding MGP_LPJ_T0022449.1 MGP_LPJ_G0016489.1 mouse_genomes_project 1 151926105 152358048 + MGP_LPJ_P0022449 Brinp3 protein_coding protein_coding MGP_LPJ_T0022450.1 MGP_LPJ_G0016489.1 mouse_genomes_project 1 151926122 152358042 + MGP_LPJ_P0022450 Brinp3 protein_coding nonsense_mediated_decay MGP_LPJ_T0022451.1 MGP_LPJ_G0016489.1 mouse_genomes_project 1 151926156 151946766 + Brinp3 protein_coding retained_intron MGP_LPJ_T0009551.1 MGP_LPJ_G0007669.1 mouse_genomes_project 1 143076795 143076882 + Mir181a-1 miRNA miRNA MGP_LPJ_T0000703.1 MGP_LPJ_G0000636.1 mouse_genomes_project 1 148176332 148176466 + TEC TEC MGP_LPJ_T0012130.1 MGP_LPJ_G0010221.1 mouse_genomes_project 1 89168063 89168485 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011950.1 MGP_LPJ_G0010041.1 mouse_genomes_project 1 29471504 29472264 - processed_pseudogene processed_pseudogene MGP_LPJ_T0022240.1 MGP_LPJ_G0016445.1 mouse_genomes_project 1 140735605 140768975 + MGP_LPJ_P0022240 Csrp1 protein_coding protein_coding MGP_LPJ_T0022241.1 MGP_LPJ_G0016445.1 mouse_genomes_project 1 140744682 140768975 + MGP_LPJ_P0022241 Csrp1 protein_coding protein_coding MGP_LPJ_T0000573.1 MGP_LPJ_G0000508.1 mouse_genomes_project 1 85129830 85130923 - TEC TEC MGP_LPJ_T0000475.1 MGP_LPJ_G0000410.1 mouse_genomes_project 1 32750229 32751893 + TEC TEC MGP_LPJ_T0023868.1 MGP_LPJ_G0016801.1 mouse_genomes_project 1 189116734 189230837 + MGP_LPJ_P0023868 Cnih3 protein_coding protein_coding MGP_LPJ_T0023869.1 MGP_LPJ_G0016801.1 mouse_genomes_project 1 189116736 189231569 + MGP_LPJ_P0023869 Cnih3 protein_coding protein_coding MGP_LPJ_T0023870.1 MGP_LPJ_G0016801.1 mouse_genomes_project 1 189117304 189230215 + MGP_LPJ_P0023870 Cnih3 protein_coding protein_coding MGP_LPJ_T0012364.1 MGP_LPJ_G0010455.1 mouse_genomes_project 1 197932155 197932417 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021290.1 MGP_LPJ_G0016236.1 mouse_genomes_project 1 95366699 95367790 + MGP_LPJ_P0021290 Olfr1412 protein_coding protein_coding MGP_LPJ_T0000769.1 MGP_LPJ_G0000702.1 mouse_genomes_project 1 173051365 173052271 - TEC TEC MGP_LPJ_T0098722.1 MGP_LPJ_G0036985.1 mouse_genomes_project 1 1934848 1934951 - Gm25493 snRNA snRNA MGP_LPJ_T0000406.1 MGP_LPJ_G0000344.1 mouse_genomes_project 1 7538229 7539149 - TEC TEC MGP_LPJ_T0012114.1 MGP_LPJ_G0010205.1 mouse_genomes_project 1 82946234 82946701 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000593.1 MGP_LPJ_G0000528.1 mouse_genomes_project 1 90322635 90325626 + TEC TEC MGP_LPJ_T0019381.1 MGP_LPJ_G0015863.1 mouse_genomes_project 1 37061561 37140892 - MGP_LPJ_P0019381 Rev1 protein_coding protein_coding MGP_LPJ_T0019382.1 MGP_LPJ_G0015863.1 mouse_genomes_project 1 37061571 37098084 - Rev1 protein_coding retained_intron MGP_LPJ_T0019383.1 MGP_LPJ_G0015863.1 mouse_genomes_project 1 37062075 37063026 - Rev1 protein_coding retained_intron MGP_LPJ_T0019384.1 MGP_LPJ_G0015863.1 mouse_genomes_project 1 37065270 37066454 - Rev1 protein_coding retained_intron MGP_LPJ_T0019385.1 MGP_LPJ_G0015863.1 mouse_genomes_project 1 37076303 37093708 - MGP_LPJ_P0019385 Rev1 protein_coding nonsense_mediated_decay MGP_LPJ_T0019386.1 MGP_LPJ_G0015863.1 mouse_genomes_project 1 37081350 37095579 - MGP_LPJ_P0019386 Rev1 protein_coding nonsense_mediated_decay MGP_LPJ_T0019387.1 MGP_LPJ_G0015863.1 mouse_genomes_project 1 37084574 37091286 - Rev1 protein_coding processed_transcript MGP_LPJ_T0019388.1 MGP_LPJ_G0015863.1 mouse_genomes_project 1 37089002 37093774 - Rev1 protein_coding retained_intron MGP_LPJ_T0019389.1 MGP_LPJ_G0015863.1 mouse_genomes_project 1 37104050 37139531 - MGP_LPJ_P0019389 Rev1 protein_coding protein_coding MGP_LPJ_T0019390.1 MGP_LPJ_G0015863.1 mouse_genomes_project 1 37110125 37139547 - MGP_LPJ_P0019390 Rev1 protein_coding protein_coding MGP_LPJ_T0019391.1 MGP_LPJ_G0015863.1 mouse_genomes_project 1 37118899 37141031 - MGP_LPJ_P0019391 Rev1 protein_coding protein_coding MGP_LPJ_T0012283.1 MGP_LPJ_G0010374.1 mouse_genomes_project 1 156827818 156828729 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000705.1 MGP_LPJ_G0000638.1 mouse_genomes_project 1 151905953 151911264 - TEC TEC MGP_LPJ_T0017027.1 MGP_LPJ_G0015040.1 mouse_genomes_project 1 179492878 179506982 - 4933439K11Rik processed_transcript lincRNA MGP_LPJ_T0017028.1 MGP_LPJ_G0015040.1 mouse_genomes_project 1 179496392 179507119 - 4933439K11Rik processed_transcript lincRNA MGP_LPJ_T0017029.1 MGP_LPJ_G0015040.1 mouse_genomes_project 1 179505562 179514410 - 4933439K11Rik processed_transcript antisense MGP_LPJ_T0020505.1 MGP_LPJ_G0016081.1 mouse_genomes_project 1 76625234 76628434 - MGP_LPJ_P0020505 Cryba2 protein_coding protein_coding MGP_LPJ_T0020506.1 MGP_LPJ_G0016081.1 mouse_genomes_project 1 76625833 76628183 - MGP_LPJ_P0020506 Cryba2 protein_coding nonsense_mediated_decay MGP_LPJ_T0021228.1 MGP_LPJ_G0016221.1 mouse_genomes_project 1 94021519 94048321 + MGP_LPJ_P0021228 Espnl protein_coding protein_coding MGP_LPJ_T0021229.1 MGP_LPJ_G0016221.1 mouse_genomes_project 1 94021577 94045951 + MGP_LPJ_P0021229 Espnl protein_coding protein_coding MGP_LPJ_T0000469.1 MGP_LPJ_G0000405.1 mouse_genomes_project 1 32372059 32372948 + TEC TEC MGP_LPJ_T0000470.1 MGP_LPJ_G0000405.1 mouse_genomes_project 1 32372078 32372948 + TEC TEC MGP_LPJ_T0009532.1 MGP_LPJ_G0007650.1 mouse_genomes_project 1 95226605 95226665 - Mir6900 miRNA miRNA MGP_LPJ_T0005770.1 MGP_LPJ_G0004844.1 mouse_genomes_project 1 61733350 61756055 + 2310016D23Rik lincRNA lincRNA MGP_LPJ_T0000481.1 MGP_LPJ_G0000416.1 mouse_genomes_project 1 35805416 35805559 - TEC TEC MGP_LPJ_T0012210.1 MGP_LPJ_G0010301.1 mouse_genomes_project 1 123588271 123588664 + processed_pseudogene processed_pseudogene MGP_LPJ_T0023653.1 MGP_LPJ_G0016759.1 mouse_genomes_project 1 183210801 183212698 + MGP_LPJ_P0023653 Gm38100 protein_coding protein_coding MGP_LPJ_T0023654.1 MGP_LPJ_G0016759.1 mouse_genomes_project 1 183210842 183212171 + MGP_LPJ_P0023654 Gm38100 protein_coding protein_coding MGP_LPJ_T0005801.1 MGP_LPJ_G0004868.1 mouse_genomes_project 1 73520586 73576585 - 4930556G22Rik lincRNA lincRNA MGP_LPJ_T0011275.1 MGP_LPJ_G0009393.1 mouse_genomes_project 1 184132733 184132998 + Gm25288 misc_RNA misc_RNA MGP_LPJ_T0019754.1 MGP_LPJ_G0015941.1 mouse_genomes_project 1 54974402 55064817 - MGP_LPJ_P0019754 Pgap1 protein_coding protein_coding MGP_LPJ_T0019755.1 MGP_LPJ_G0015941.1 mouse_genomes_project 1 55028554 55064819 - Pgap1 protein_coding retained_intron MGP_LPJ_T0019756.1 MGP_LPJ_G0015941.1 mouse_genomes_project 1 55030972 55034219 - Pgap1 protein_coding retained_intron MGP_LPJ_T0019757.1 MGP_LPJ_G0015941.1 mouse_genomes_project 1 55061737 55064762 - Pgap1 protein_coding retained_intron MGP_LPJ_T0005692.1 MGP_LPJ_G0004790.1 mouse_genomes_project 1 26121514 26140465 + Gm5524 lincRNA lincRNA MGP_LPJ_T0011279.1 MGP_LPJ_G0009397.1 mouse_genomes_project 1 201256235 201256524 - Gm23583 misc_RNA misc_RNA MGP_LPJ_T0019489.1 MGP_LPJ_G0015886.1 mouse_genomes_project 1 39934714 39954216 - MGP_LPJ_P0019489 Mfsd9 protein_coding protein_coding MGP_LPJ_T0019490.1 MGP_LPJ_G0015886.1 mouse_genomes_project 1 39934717 39954240 - MGP_LPJ_P0019490 Mfsd9 protein_coding nonsense_mediated_decay MGP_LPJ_T0019491.1 MGP_LPJ_G0015886.1 mouse_genomes_project 1 39943831 39954210 - Mfsd9 protein_coding retained_intron MGP_LPJ_T0021676.1 MGP_LPJ_G0016322.1 mouse_genomes_project 1 124244954 124252581 - MGP_LPJ_P0021676 Dbi protein_coding protein_coding MGP_LPJ_T0021677.1 MGP_LPJ_G0016322.1 mouse_genomes_project 1 124244958 124252645 - MGP_LPJ_P0021677 Dbi protein_coding nonsense_mediated_decay MGP_LPJ_T0021678.1 MGP_LPJ_G0016322.1 mouse_genomes_project 1 124245037 124251798 - Dbi protein_coding processed_transcript MGP_LPJ_T0021679.1 MGP_LPJ_G0016322.1 mouse_genomes_project 1 124245068 124252565 - MGP_LPJ_P0021679 Dbi protein_coding protein_coding MGP_LPJ_T0021680.1 MGP_LPJ_G0016322.1 mouse_genomes_project 1 124247678 124252675 - Dbi protein_coding retained_intron MGP_LPJ_T0021681.1 MGP_LPJ_G0016322.1 mouse_genomes_project 1 124251385 124252642 - Dbi protein_coding retained_intron MGP_LPJ_T0100029.1 MGP_LPJ_G0038292.1 mouse_genomes_project 1 166968451 166968583 + Gm23528 snoRNA snoRNA MGP_LPJ_T0000704.1 MGP_LPJ_G0000637.1 mouse_genomes_project 1 150726163 150730647 - TEC TEC MGP_LPJ_T0005847.1 MGP_LPJ_G0004903.1 mouse_genomes_project 1 91447586 91458070 - Gm29337 lincRNA lincRNA MGP_LPJ_T0003002.1 MGP_LPJ_G0002818.1 mouse_genomes_project 1 196026900 196029317 - 9330162B11Rik antisense antisense MGP_LPJ_T0022253.1 MGP_LPJ_G0016448.1 mouse_genomes_project 1 140837839 140852392 + MGP_LPJ_P0022253 Lad1 protein_coding protein_coding MGP_LPJ_T0022254.1 MGP_LPJ_G0016448.1 mouse_genomes_project 1 140849044 140851757 + Lad1 protein_coding processed_transcript MGP_LPJ_T0022255.1 MGP_LPJ_G0016448.1 mouse_genomes_project 1 140849583 140851512 + Lad1 protein_coding processed_transcript MGP_LPJ_T0021558.1 MGP_LPJ_G0016296.1 mouse_genomes_project 1 110443286 110449284 - MGP_LPJ_P0021558 Serpinb3a protein_coding protein_coding MGP_LPJ_T0021559.1 MGP_LPJ_G0016296.1 mouse_genomes_project 1 110443304 110449898 - MGP_LPJ_P0021559 Serpinb3a protein_coding protein_coding MGP_LPJ_T0012358.1 MGP_LPJ_G0010449.1 mouse_genomes_project 1 192461690 192462170 + processed_pseudogene processed_pseudogene MGP_LPJ_T0019162.1 MGP_LPJ_G0015823.1 mouse_genomes_project 1 33186055 33187350 + Ptpn18 protein_coding retained_intron MGP_LPJ_T0019163.1 MGP_LPJ_G0015823.1 mouse_genomes_project 1 33186058 33204681 + MGP_LPJ_P0019163 Ptpn18 protein_coding protein_coding MGP_LPJ_T0019164.1 MGP_LPJ_G0015823.1 mouse_genomes_project 1 33186070 33202848 + MGP_LPJ_P0019164 Ptpn18 protein_coding protein_coding MGP_LPJ_T0019165.1 MGP_LPJ_G0015823.1 mouse_genomes_project 1 33186085 33202847 + Ptpn18 protein_coding retained_intron MGP_LPJ_T0019166.1 MGP_LPJ_G0015823.1 mouse_genomes_project 1 33189563 33193565 + Ptpn18 protein_coding retained_intron MGP_LPJ_T0019167.1 MGP_LPJ_G0015823.1 mouse_genomes_project 1 33203616 33206630 + MGP_LPJ_P0019167 Ptpn18 protein_coding protein_coding MGP_LPJ_T0019168.1 MGP_LPJ_G0015823.1 mouse_genomes_project 1 33205395 33206630 + Ptpn18 protein_coding processed_transcript MGP_LPJ_T0020075.1 MGP_LPJ_G0015996.1 mouse_genomes_project 1 61941742 61958634 + MGP_LPJ_P0020075 Icos protein_coding protein_coding MGP_LPJ_T0020076.1 MGP_LPJ_G0015996.1 mouse_genomes_project 1 61941742 61963131 + MGP_LPJ_P0020076 Icos protein_coding protein_coding MGP_LPJ_T0002876.1 MGP_LPJ_G0002718.1 mouse_genomes_project 1 94001915 94020546 - Gm17090 antisense antisense MGP_LPJ_T0000498.1 MGP_LPJ_G0000433.1 mouse_genomes_project 1 43939359 43943760 + TEC TEC MGP_LPJ_T0020499.1 MGP_LPJ_G0016078.1 mouse_genomes_project 1 76519472 76532026 + MGP_LPJ_P0020499 Wnt10a protein_coding protein_coding MGP_LPJ_T0020500.1 MGP_LPJ_G0016078.1 mouse_genomes_project 1 76521245 76531342 + MGP_LPJ_P0020500 Wnt10a protein_coding protein_coding MGP_LPJ_T0101738.1 MGP_LPJ_G0039776.1 mouse_genomes_project 1 185218876 185395346 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002973.1 MGP_LPJ_G0002792.1 mouse_genomes_project 1 178540093 178541244 + Gm37787 antisense antisense MGP_LPJ_T0018898.1 MGP_LPJ_G0015766.1 mouse_genomes_project 1 13534168 13569405 - MGP_LPJ_P0018898 Sbspon protein_coding protein_coding MGP_LPJ_T0011955.1 MGP_LPJ_G0010046.1 mouse_genomes_project 1 29788714 29789278 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021135.1 MGP_LPJ_G0016202.1 mouse_genomes_project 1 90969138 90988412 + MGP_LPJ_P0021135 Spp2 protein_coding protein_coding MGP_LPJ_T0021136.1 MGP_LPJ_G0016202.1 mouse_genomes_project 1 90969394 90988408 + MGP_LPJ_P0021136 Spp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0012118.1 MGP_LPJ_G0010209.1 mouse_genomes_project 1 84814841 84815024 - processed_pseudogene processed_pseudogene MGP_LPJ_T0020512.1 MGP_LPJ_G0016084.1 mouse_genomes_project 1 76703417 76793858 - MGP_LPJ_P0020512 Nhej1 protein_coding protein_coding MGP_LPJ_T0020513.1 MGP_LPJ_G0016084.1 mouse_genomes_project 1 76703972 76810009 - MGP_LPJ_P0020513 Nhej1 protein_coding unknown_likely_coding MGP_LPJ_T0020514.1 MGP_LPJ_G0016084.1 mouse_genomes_project 1 76809883 76809948 - Nhej1 protein_coding processed_transcript MGP_LPJ_T0100018.1 MGP_LPJ_G0038281.1 mouse_genomes_project 1 138478926 138479059 + Gm23939 snoRNA snoRNA MGP_LPJ_T0000488.1 MGP_LPJ_G0000423.1 mouse_genomes_project 1 37808134 37808668 + TEC TEC MGP_LPJ_T0023080.1 MGP_LPJ_G0016608.1 mouse_genomes_project 1 171757294 171781567 - MGP_LPJ_P0023080 Tiprl protein_coding protein_coding MGP_LPJ_T0023081.1 MGP_LPJ_G0016608.1 mouse_genomes_project 1 171760590 171761536 - Tiprl protein_coding retained_intron MGP_LPJ_T0023082.1 MGP_LPJ_G0016608.1 mouse_genomes_project 1 171760734 171781620 - MGP_LPJ_P0023082 Tiprl protein_coding nonsense_mediated_decay MGP_LPJ_T0023083.1 MGP_LPJ_G0016608.1 mouse_genomes_project 1 171767330 171781546 - Tiprl protein_coding processed_transcript MGP_LPJ_T0023084.1 MGP_LPJ_G0016608.1 mouse_genomes_project 1 171772155 171781137 - MGP_LPJ_P0023084 Tiprl protein_coding protein_coding MGP_LPJ_T0023085.1 MGP_LPJ_G0016608.1 mouse_genomes_project 1 171773014 171781556 - Tiprl protein_coding processed_transcript MGP_LPJ_T0023022.1 MGP_LPJ_G0016592.1 mouse_genomes_project 1 170418747 170444346 + MGP_LPJ_P0023022 Scyl3 protein_coding protein_coding MGP_LPJ_T0023023.1 MGP_LPJ_G0016592.1 mouse_genomes_project 1 170419408 170444770 + MGP_LPJ_P0023023 Scyl3 protein_coding protein_coding MGP_LPJ_T0023024.1 MGP_LPJ_G0016592.1 mouse_genomes_project 1 170419433 170444754 + MGP_LPJ_P0023024 Scyl3 protein_coding protein_coding MGP_LPJ_T0023025.1 MGP_LPJ_G0016592.1 mouse_genomes_project 1 170419448 170444753 + MGP_LPJ_P0023025 Scyl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0023026.1 MGP_LPJ_G0016592.1 mouse_genomes_project 1 170430758 170444758 + MGP_LPJ_P0023026 Scyl3 protein_coding protein_coding MGP_LPJ_T0023027.1 MGP_LPJ_G0016592.1 mouse_genomes_project 1 170433414 170434488 + Scyl3 protein_coding processed_transcript MGP_LPJ_T0023029.1 MGP_LPJ_G0016592.1 mouse_genomes_project 1 170440856 170443446 + Scyl3 protein_coding retained_intron MGP_LPJ_T0098445.1 MGP_LPJ_G0036726.1 mouse_genomes_project 1 70495174 70511849 - Gm16076 sense_intronic sense_intronic MGP_LPJ_T0019208.1 MGP_LPJ_G0015834.1 mouse_genomes_project 1 35200034 35212027 + MGP_LPJ_P0019208 Arid5a protein_coding protein_coding MGP_LPJ_T0019209.1 MGP_LPJ_G0015834.1 mouse_genomes_project 1 35200055 35211112 + Arid5a protein_coding retained_intron MGP_LPJ_T0019210.1 MGP_LPJ_G0015834.1 mouse_genomes_project 1 35200055 35212038 + Arid5a protein_coding processed_transcript MGP_LPJ_T0019211.1 MGP_LPJ_G0015834.1 mouse_genomes_project 1 35200055 35212711 + Arid5a protein_coding retained_intron MGP_LPJ_T0019212.1 MGP_LPJ_G0015834.1 mouse_genomes_project 1 35200055 35213352 + MGP_LPJ_P0019212 Arid5a protein_coding nonsense_mediated_decay MGP_LPJ_T0019213.1 MGP_LPJ_G0015834.1 mouse_genomes_project 1 35200055 35216853 + MGP_LPJ_P0019213 Arid5a protein_coding protein_coding MGP_LPJ_T0019214.1 MGP_LPJ_G0015834.1 mouse_genomes_project 1 35200055 35213895 + MGP_LPJ_P0019214 Arid5a protein_coding protein_coding MGP_LPJ_T0019215.1 MGP_LPJ_G0015834.1 mouse_genomes_project 1 35200055 35213350 + MGP_LPJ_P0019215 Arid5a protein_coding protein_coding MGP_LPJ_T0019216.1 MGP_LPJ_G0015834.1 mouse_genomes_project 1 35200055 35210266 + MGP_LPJ_P0019216 Arid5a protein_coding protein_coding MGP_LPJ_T0019217.1 MGP_LPJ_G0015834.1 mouse_genomes_project 1 35200059 35205600 + Arid5a protein_coding retained_intron MGP_LPJ_T0019218.1 MGP_LPJ_G0015834.1 mouse_genomes_project 1 35200080 35209402 + Arid5a protein_coding retained_intron MGP_LPJ_T0019219.1 MGP_LPJ_G0015834.1 mouse_genomes_project 1 35200134 35213350 + MGP_LPJ_P0019219 Arid5a protein_coding protein_coding MGP_LPJ_T0019220.1 MGP_LPJ_G0015834.1 mouse_genomes_project 1 35208815 35210960 + Arid5a protein_coding retained_intron MGP_LPJ_T0019221.1 MGP_LPJ_G0015834.1 mouse_genomes_project 1 35209850 35210956 + Arid5a protein_coding retained_intron MGP_LPJ_T0016931.1 MGP_LPJ_G0015010.1 mouse_genomes_project 1 43449867 43469464 - Gm29247 processed_transcript processed_transcript MGP_LPJ_T0016932.1 MGP_LPJ_G0015010.1 mouse_genomes_project 1 43449968 43470209 - Gm29247 processed_transcript processed_transcript MGP_LPJ_T0011933.1 MGP_LPJ_G0010024.1 mouse_genomes_project 1 20942271 20945577 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012236.1 MGP_LPJ_G0010327.1 mouse_genomes_project 1 134471783 134473364 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000422.1 MGP_LPJ_G0000360.1 mouse_genomes_project 1 11709589 11713190 - TEC TEC MGP_LPJ_T0020332.1 MGP_LPJ_G0016045.1 mouse_genomes_project 1 73842431 73862306 + MGP_LPJ_P0020332 Tmem169 protein_coding protein_coding MGP_LPJ_T0020333.1 MGP_LPJ_G0016045.1 mouse_genomes_project 1 73842457 73859975 + MGP_LPJ_P0020333 Tmem169 protein_coding protein_coding MGP_LPJ_T0012202.1 MGP_LPJ_G0010293.1 mouse_genomes_project 1 121386238 121387514 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000544.1 MGP_LPJ_G0000479.1 mouse_genomes_project 1 69993537 69994903 - TEC TEC MGP_LPJ_T0000552.1 MGP_LPJ_G0000487.1 mouse_genomes_project 1 75980812 75981131 - TEC TEC MGP_LPJ_T0000651.1 MGP_LPJ_G0000586.1 mouse_genomes_project 1 132740671 132741986 + TEC TEC MGP_LPJ_T0009553.1 MGP_LPJ_G0007671.1 mouse_genomes_project 1 155696354 155696466 - Gm44329 miRNA miRNA MGP_LPJ_T0023676.1 MGP_LPJ_G0016762.1 mouse_genomes_project 1 184154951 184293983 + Sdccag8 protein_coding retained_intron MGP_LPJ_T0023677.1 MGP_LPJ_G0016762.1 mouse_genomes_project 1 184154951 184187627 + Sdccag8 protein_coding retained_intron MGP_LPJ_T0023678.1 MGP_LPJ_G0016762.1 mouse_genomes_project 1 184154951 184199024 + MGP_LPJ_P0023678 Sdccag8 protein_coding protein_coding MGP_LPJ_T0023679.1 MGP_LPJ_G0016762.1 mouse_genomes_project 1 184154951 184368488 + MGP_LPJ_P0023679 Sdccag8 protein_coding nonsense_mediated_decay MGP_LPJ_T0023680.1 MGP_LPJ_G0016762.1 mouse_genomes_project 1 184154951 184368488 + MGP_LPJ_P0023680 Sdccag8 protein_coding protein_coding MGP_LPJ_T0023681.1 MGP_LPJ_G0016762.1 mouse_genomes_project 1 184338956 184368488 + Sdccag8 protein_coding processed_transcript MGP_LPJ_T0005737.1 MGP_LPJ_G0004818.1 mouse_genomes_project 1 42046928 42049098 + Dalir lincRNA lincRNA MGP_LPJ_T0022750.1 MGP_LPJ_G0016544.1 mouse_genomes_project 1 162749339 162774872 - MGP_LPJ_P0022750 Tor3a protein_coding protein_coding MGP_LPJ_T0022751.1 MGP_LPJ_G0016544.1 mouse_genomes_project 1 162749339 162774872 - MGP_LPJ_P0022751 Tor3a protein_coding nonsense_mediated_decay MGP_LPJ_T0022752.1 MGP_LPJ_G0016544.1 mouse_genomes_project 1 162749339 162774841 - MGP_LPJ_P0022752 Tor3a protein_coding nonsense_mediated_decay MGP_LPJ_T0022753.1 MGP_LPJ_G0016544.1 mouse_genomes_project 1 162750745 162774830 - MGP_LPJ_P0022753 Tor3a protein_coding protein_coding MGP_LPJ_T0022754.1 MGP_LPJ_G0016544.1 mouse_genomes_project 1 162751394 162754181 - Tor3a protein_coding processed_transcript MGP_LPJ_T0022755.1 MGP_LPJ_G0016544.1 mouse_genomes_project 1 162759272 162767250 - Tor3a protein_coding processed_transcript MGP_LPJ_T0022756.1 MGP_LPJ_G0016544.1 mouse_genomes_project 1 162767211 162774851 - MGP_LPJ_P0022756 Tor3a protein_coding protein_coding MGP_LPJ_T0023185.1 MGP_LPJ_G0016628.1 mouse_genomes_project 1 173850421 173919114 - MGP_LPJ_P0023185 Uck2 protein_coding protein_coding MGP_LPJ_T0023186.1 MGP_LPJ_G0016628.1 mouse_genomes_project 1 173853389 173918678 - MGP_LPJ_P0023186 Uck2 protein_coding nonsense_mediated_decay MGP_LPJ_T0023187.1 MGP_LPJ_G0016628.1 mouse_genomes_project 1 173853775 173864370 - MGP_LPJ_P0023187 Uck2 protein_coding protein_coding MGP_LPJ_T0023188.1 MGP_LPJ_G0016628.1 mouse_genomes_project 1 173853880 173873289 - MGP_LPJ_P0023188 Uck2 protein_coding protein_coding MGP_LPJ_T0023189.1 MGP_LPJ_G0016628.1 mouse_genomes_project 1 173857427 173918395 - MGP_LPJ_P0023189 Uck2 protein_coding protein_coding MGP_LPJ_T0023190.1 MGP_LPJ_G0016628.1 mouse_genomes_project 1 173862226 173918672 - MGP_LPJ_P0023190 Uck2 protein_coding nonsense_mediated_decay MGP_LPJ_T0023191.1 MGP_LPJ_G0016628.1 mouse_genomes_project 1 173865016 173918501 - Uck2 protein_coding processed_transcript MGP_LPJ_T0005817.1 MGP_LPJ_G0004878.1 mouse_genomes_project 1 77761379 77763478 - Gm29065 lincRNA lincRNA MGP_LPJ_T0005865.1 MGP_LPJ_G0004921.1 mouse_genomes_project 1 95545220 95546488 - Gm29482 lincRNA lincRNA MGP_LPJ_T0012313.1 MGP_LPJ_G0010404.1 mouse_genomes_project 1 171018194 171018510 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021735.1 MGP_LPJ_G0016335.1 mouse_genomes_project 1 130117684 130329028 + MGP_LPJ_P0021735 Gpr39 protein_coding protein_coding MGP_LPJ_T0021736.1 MGP_LPJ_G0016335.1 mouse_genomes_project 1 130293709 130328339 + Gpr39 protein_coding processed_transcript MGP_LPJ_T0016958.1 MGP_LPJ_G0015022.1 mouse_genomes_project 1 92529878 92531507 + D130058E05Rik processed_transcript antisense MGP_LPJ_T0016959.1 MGP_LPJ_G0015022.1 mouse_genomes_project 1 92529905 92532934 + D130058E05Rik processed_transcript retained_intron MGP_LPJ_T0005806.1 MGP_LPJ_G0004871.1 mouse_genomes_project 1 74896221 74936582 + Gm29185 lincRNA lincRNA MGP_LPJ_T0020640.1 MGP_LPJ_G0016100.1 mouse_genomes_project 1 77054178 77062420 + MGP_LPJ_P0020640 Des protein_coding protein_coding MGP_LPJ_T0020641.1 MGP_LPJ_G0016100.1 mouse_genomes_project 1 77055366 77056244 + Des protein_coding retained_intron MGP_LPJ_T0020642.1 MGP_LPJ_G0016100.1 mouse_genomes_project 1 77055870 77057479 + Des protein_coding retained_intron MGP_LPJ_T0022003.1 MGP_LPJ_G0016394.1 mouse_genomes_project 1 137305854 137321005 - MGP_LPJ_P0022003 Cntn2 protein_coding nonsense_mediated_decay MGP_LPJ_T0022004.1 MGP_LPJ_G0016394.1 mouse_genomes_project 1 137305854 137312065 - MGP_LPJ_P0022004 Cntn2 protein_coding nonsense_mediated_decay MGP_LPJ_T0022005.1 MGP_LPJ_G0016394.1 mouse_genomes_project 1 137308205 137344169 - Cntn2 protein_coding retained_intron MGP_LPJ_T0022006.1 MGP_LPJ_G0016394.1 mouse_genomes_project 1 137308209 137344218 - MGP_LPJ_P0022006 Cntn2 protein_coding protein_coding MGP_LPJ_T0022007.1 MGP_LPJ_G0016394.1 mouse_genomes_project 1 137308219 137344144 - Cntn2 protein_coding retained_intron MGP_LPJ_T0022008.1 MGP_LPJ_G0016394.1 mouse_genomes_project 1 137313428 137316865 - Cntn2 protein_coding retained_intron MGP_LPJ_T0022009.1 MGP_LPJ_G0016394.1 mouse_genomes_project 1 137326610 137331496 - MGP_LPJ_P0022009 Cntn2 protein_coding protein_coding MGP_LPJ_T0022010.1 MGP_LPJ_G0016394.1 mouse_genomes_project 1 137331268 137344535 - MGP_LPJ_P0022010 Cntn2 protein_coding protein_coding MGP_LPJ_T0101724.1 MGP_LPJ_G0039762.1 mouse_genomes_project 1 180001309 180002168 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0000384.1 MGP_LPJ_G0000322.1 mouse_genomes_project 1 243086 244156 + TEC TEC MGP_LPJ_T0019003.1 MGP_LPJ_G0015794.1 mouse_genomes_project 1 19301269 19303623 + MGP_LPJ_P0019003 protein_coding protein_coding MGP_LPJ_T0100020.1 MGP_LPJ_G0038283.1 mouse_genomes_project 1 142467032 142467129 - Gm23534 snoRNA snoRNA MGP_LPJ_T0000590.1 MGP_LPJ_G0000525.1 mouse_genomes_project 1 89392096 89392744 + TEC TEC MGP_LPJ_T0021941.1 MGP_LPJ_G0016382.1 mouse_genomes_project 1 136728903 136748907 + MGP_LPJ_P0021941 Slc45a3 protein_coding protein_coding MGP_LPJ_T0021942.1 MGP_LPJ_G0016382.1 mouse_genomes_project 1 136736546 136748902 + MGP_LPJ_P0021942 Slc45a3 protein_coding protein_coding MGP_LPJ_T0021943.1 MGP_LPJ_G0016382.1 mouse_genomes_project 1 136742656 136743883 + MGP_LPJ_P0021943 Slc45a3 protein_coding protein_coding MGP_LPJ_T0021944.1 MGP_LPJ_G0016382.1 mouse_genomes_project 1 136744901 136747844 + Slc45a3 protein_coding processed_transcript MGP_LPJ_T0012023.1 MGP_LPJ_G0010114.1 mouse_genomes_project 1 49203337 49205043 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101700.1 MGP_LPJ_G0039738.1 mouse_genomes_project 1 90671404 90672187 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0020735.1 MGP_LPJ_G0016114.1 mouse_genomes_project 1 80358907 80365221 - protein_coding processed_transcript MGP_LPJ_T0000526.1 MGP_LPJ_G0000461.1 mouse_genomes_project 1 62615183 62617919 + TEC TEC MGP_LPJ_T0009545.1 MGP_LPJ_G0007663.1 mouse_genomes_project 1 136242568 136242732 - Gm24273 miRNA miRNA MGP_LPJ_T0023899.1 MGP_LPJ_G0016806.1 mouse_genomes_project 1 189938021 189945994 + MGP_LPJ_P0023899 Srp9 protein_coding protein_coding MGP_LPJ_T0023900.1 MGP_LPJ_G0016806.1 mouse_genomes_project 1 189938034 189946482 + MGP_LPJ_P0023900 Srp9 protein_coding protein_coding MGP_LPJ_T0023901.1 MGP_LPJ_G0016806.1 mouse_genomes_project 1 189938065 189941780 + Srp9 protein_coding retained_intron MGP_LPJ_T0023902.1 MGP_LPJ_G0016806.1 mouse_genomes_project 1 189944824 189945880 + Srp9 protein_coding retained_intron MGP_LPJ_T0019939.1 MGP_LPJ_G0015974.1 mouse_genomes_project 1 59735233 59799465 - MGP_LPJ_P0019939 Trak2 protein_coding protein_coding MGP_LPJ_T0019940.1 MGP_LPJ_G0015974.1 mouse_genomes_project 1 59738290 59772314 - MGP_LPJ_P0019940 Trak2 protein_coding protein_coding MGP_LPJ_T0019941.1 MGP_LPJ_G0015974.1 mouse_genomes_project 1 59738458 59741929 - Trak2 protein_coding retained_intron MGP_LPJ_T0019942.1 MGP_LPJ_G0015974.1 mouse_genomes_project 1 59755642 59757444 - Trak2 protein_coding processed_transcript MGP_LPJ_T0019943.1 MGP_LPJ_G0015974.1 mouse_genomes_project 1 59761609 59799464 - MGP_LPJ_P0019943 Trak2 protein_coding protein_coding MGP_LPJ_T0019944.1 MGP_LPJ_G0015974.1 mouse_genomes_project 1 59771878 59799465 - Trak2 protein_coding retained_intron MGP_LPJ_T0021162.1 MGP_LPJ_G0016211.1 mouse_genomes_project 1 93252711 93262591 + MGP_LPJ_P0021162 Cops8 protein_coding protein_coding MGP_LPJ_T0021163.1 MGP_LPJ_G0016211.1 mouse_genomes_project 1 93252742 93262373 + Cops8 protein_coding retained_intron MGP_LPJ_T0021164.1 MGP_LPJ_G0016211.1 mouse_genomes_project 1 93252744 93260716 + Cops8 protein_coding retained_intron MGP_LPJ_T0021165.1 MGP_LPJ_G0016211.1 mouse_genomes_project 1 93252765 93254908 + Cops8 protein_coding retained_intron MGP_LPJ_T0021166.1 MGP_LPJ_G0016211.1 mouse_genomes_project 1 93252765 93260287 + Cops8 protein_coding processed_transcript MGP_LPJ_T0021167.1 MGP_LPJ_G0016211.1 mouse_genomes_project 1 93252794 93261430 + MGP_LPJ_P0021167 Cops8 protein_coding protein_coding MGP_LPJ_T0021168.1 MGP_LPJ_G0016211.1 mouse_genomes_project 1 93258903 93260578 + Cops8 protein_coding retained_intron MGP_LPJ_T0021169.1 MGP_LPJ_G0016211.1 mouse_genomes_project 1 93260595 93261643 + Cops8 protein_coding retained_intron MGP_LPJ_T0000393.1 MGP_LPJ_G0000331.1 mouse_genomes_project 1 1991996 1993154 - TEC TEC MGP_LPJ_T0020328.1 MGP_LPJ_G0016044.1 mouse_genomes_project 1 73815167 73842322 - MGP_LPJ_P0020328 Pecr protein_coding nonsense_mediated_decay MGP_LPJ_T0020329.1 MGP_LPJ_G0016044.1 mouse_genomes_project 1 73815172 73842376 - MGP_LPJ_P0020329 Pecr protein_coding nonsense_mediated_decay MGP_LPJ_T0020330.1 MGP_LPJ_G0016044.1 mouse_genomes_project 1 73815172 73842377 - MGP_LPJ_P0020330 Pecr protein_coding protein_coding MGP_LPJ_T0020331.1 MGP_LPJ_G0016044.1 mouse_genomes_project 1 73822996 73842322 - MGP_LPJ_P0020331 Pecr protein_coding protein_coding MGP_LPJ_T0000418.1 MGP_LPJ_G0000356.1 mouse_genomes_project 1 10903714 10908287 - TEC TEC MGP_LPJ_T0000640.1 MGP_LPJ_G0000575.1 mouse_genomes_project 1 129228226 129231258 - TEC TEC MGP_LPJ_T0023693.1 MGP_LPJ_G0016766.1 mouse_genomes_project 1 185152424 185187358 - MGP_LPJ_P0023693 Adss protein_coding protein_coding MGP_LPJ_T0023694.1 MGP_LPJ_G0016766.1 mouse_genomes_project 1 185152638 185158064 - Adss protein_coding retained_intron MGP_LPJ_T0023695.1 MGP_LPJ_G0016766.1 mouse_genomes_project 1 185164080 185187348 - Adss protein_coding retained_intron MGP_LPJ_T0023370.1 MGP_LPJ_G0016671.1 mouse_genomes_project 1 178195324 178203024 - MGP_LPJ_P0023370 Ufc1 protein_coding protein_coding MGP_LPJ_T0023371.1 MGP_LPJ_G0016671.1 mouse_genomes_project 1 178195326 178197175 - Ufc1 protein_coding retained_intron MGP_LPJ_T0023372.1 MGP_LPJ_G0016671.1 mouse_genomes_project 1 178195455 178202941 - MGP_LPJ_P0023372 Ufc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0023373.1 MGP_LPJ_G0016671.1 mouse_genomes_project 1 178195473 178202987 - MGP_LPJ_P0023373 Ufc1 protein_coding protein_coding MGP_LPJ_T0023374.1 MGP_LPJ_G0016671.1 mouse_genomes_project 1 178195538 178202940 - Ufc1 protein_coding retained_intron MGP_LPJ_T0098728.1 MGP_LPJ_G0036991.1 mouse_genomes_project 1 10894329 10894441 - Gm23169 snRNA snRNA MGP_LPJ_T0024176.1 MGP_LPJ_G0016865.1 mouse_genomes_project 1 200173723 200180201 + MGP_LPJ_P0024176 Slc30a1 protein_coding protein_coding MGP_LPJ_T0024177.1 MGP_LPJ_G0016865.1 mouse_genomes_project 1 200174212 200176131 + MGP_LPJ_P0024177 Slc30a1 protein_coding protein_coding MGP_LPJ_T0012012.1 MGP_LPJ_G0010103.1 mouse_genomes_project 1 45412990 45414064 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000823.1 MGP_LPJ_G0000754.1 mouse_genomes_project 1 196189019 196191456 + TEC TEC MGP_LPJ_T0022171.1 MGP_LPJ_G0016431.1 mouse_genomes_project 1 139599047 139700041 + MGP_LPJ_P0022171 Syt2 protein_coding protein_coding MGP_LPJ_T0022172.1 MGP_LPJ_G0016431.1 mouse_genomes_project 1 139599051 139709424 + MGP_LPJ_P0022172 Syt2 protein_coding protein_coding MGP_LPJ_T0022173.1 MGP_LPJ_G0016431.1 mouse_genomes_project 1 139666920 139713156 + MGP_LPJ_P0022173 Syt2 protein_coding protein_coding MGP_LPJ_T0022174.1 MGP_LPJ_G0016431.1 mouse_genomes_project 1 139708583 139722600 + Syt2 protein_coding processed_transcript MGP_LPJ_T0021938.1 MGP_LPJ_G0016381.1 mouse_genomes_project 1 136672585 136699222 + MGP_LPJ_P0021938 Nucks1 protein_coding protein_coding MGP_LPJ_T0021939.1 MGP_LPJ_G0016381.1 mouse_genomes_project 1 136672607 136702864 + MGP_LPJ_P0021939 Nucks1 protein_coding protein_coding MGP_LPJ_T0021940.1 MGP_LPJ_G0016381.1 mouse_genomes_project 1 136695705 136696614 + Nucks1 protein_coding retained_intron MGP_LPJ_T0000710.1 MGP_LPJ_G0000643.1 mouse_genomes_project 1 155008922 155010379 - TEC TEC MGP_LPJ_T0006052.1 MGP_LPJ_G0005066.1 mouse_genomes_project 1 192453889 192473902 - Gm37800 lincRNA lincRNA MGP_LPJ_T0006053.1 MGP_LPJ_G0005066.1 mouse_genomes_project 1 192454527 192462414 - Gm37800 lincRNA lincRNA MGP_LPJ_T0023121.1 MGP_LPJ_G0016615.1 mouse_genomes_project 1 172324717 172335925 + MGP_LPJ_P0023121 Creg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0023122.1 MGP_LPJ_G0016615.1 mouse_genomes_project 1 172324717 172335925 + MGP_LPJ_P0023122 Creg1 protein_coding protein_coding MGP_LPJ_T0023123.1 MGP_LPJ_G0016615.1 mouse_genomes_project 1 172330051 172334535 + MGP_LPJ_P0023123 Creg1 protein_coding protein_coding MGP_LPJ_T0000410.1 MGP_LPJ_G0000348.1 mouse_genomes_project 1 8884690 8887729 - TEC TEC MGP_LPJ_T0006006.1 MGP_LPJ_G0005032.1 mouse_genomes_project 1 173587371 173606655 - Gm16701 lincRNA lincRNA MGP_LPJ_T0100012.1 MGP_LPJ_G0038275.1 mouse_genomes_project 1 122492744 122492875 - Gm26080 snoRNA snoRNA MGP_LPJ_T0021416.1 MGP_LPJ_G0016263.1 mouse_genomes_project 1 96519465 96579402 - MGP_LPJ_P0021416 Thap4 protein_coding protein_coding MGP_LPJ_T0021417.1 MGP_LPJ_G0016263.1 mouse_genomes_project 1 96522930 96548943 - MGP_LPJ_P0021417 Thap4 protein_coding protein_coding MGP_LPJ_T0021418.1 MGP_LPJ_G0016263.1 mouse_genomes_project 1 96522933 96579486 - MGP_LPJ_P0021418 Thap4 protein_coding nonsense_mediated_decay MGP_LPJ_T0021419.1 MGP_LPJ_G0016263.1 mouse_genomes_project 1 96522934 96532356 - MGP_LPJ_P0021419 Thap4 protein_coding nonsense_mediated_decay MGP_LPJ_T0021420.1 MGP_LPJ_G0016263.1 mouse_genomes_project 1 96532153 96572725 - MGP_LPJ_P0021420 Thap4 protein_coding protein_coding MGP_LPJ_T0021421.1 MGP_LPJ_G0016263.1 mouse_genomes_project 1 96541630 96579272 - Thap4 protein_coding retained_intron MGP_LPJ_T0011989.1 MGP_LPJ_G0010080.1 mouse_genomes_project 1 41350123 41351168 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012245.1 MGP_LPJ_G0010336.1 mouse_genomes_project 1 139026270 139026626 + processed_pseudogene processed_pseudogene MGP_LPJ_T0023037.1 MGP_LPJ_G0016595.1 mouse_genomes_project 1 170542278 170551728 + MGP_LPJ_P0023037 Sele protein_coding protein_coding MGP_LPJ_T0021231.1 MGP_LPJ_G0016223.1 mouse_genomes_project 1 94066843 94074615 + MGP_LPJ_P0021231 Fam132b protein_coding protein_coding MGP_LPJ_T0021232.1 MGP_LPJ_G0016223.1 mouse_genomes_project 1 94071107 94074490 + MGP_LPJ_P0021232 Fam132b protein_coding protein_coding MGP_LPJ_T0011974.1 MGP_LPJ_G0010065.1 mouse_genomes_project 1 33515756 33516111 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098764.1 MGP_LPJ_G0037027.1 mouse_genomes_project 1 96160909 96161012 + Gm26446 snRNA snRNA MGP_LPJ_T0012206.1 MGP_LPJ_G0010297.1 mouse_genomes_project 1 122704286 122704600 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023593.1 MGP_LPJ_G0016737.1 mouse_genomes_project 1 181182341 181183280 + MGP_LPJ_P0023593 Olfr432 protein_coding protein_coding MGP_LPJ_T0012160.1 MGP_LPJ_G0010251.1 mouse_genomes_project 1 104568443 104569161 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000684.1 MGP_LPJ_G0000618.1 mouse_genomes_project 1 143034274 143036203 + TEC TEC MGP_LPJ_T0022762.1 MGP_LPJ_G0016546.1 mouse_genomes_project 1 162906406 163046576 - MGP_LPJ_P0022762 Ralgps2 protein_coding protein_coding MGP_LPJ_T0022763.1 MGP_LPJ_G0016546.1 mouse_genomes_project 1 162909000 163046517 - MGP_LPJ_P0022763 Ralgps2 protein_coding protein_coding MGP_LPJ_T0022764.1 MGP_LPJ_G0016546.1 mouse_genomes_project 1 162909000 163046573 - MGP_LPJ_P0022764 Ralgps2 protein_coding nonsense_mediated_decay MGP_LPJ_T0022765.1 MGP_LPJ_G0016546.1 mouse_genomes_project 1 162909948 163046361 - MGP_LPJ_P0022765 Ralgps2 protein_coding protein_coding MGP_LPJ_T0022766.1 MGP_LPJ_G0016546.1 mouse_genomes_project 1 162910354 163046505 - MGP_LPJ_P0022766 Ralgps2 protein_coding protein_coding MGP_LPJ_T0022767.1 MGP_LPJ_G0016546.1 mouse_genomes_project 1 162910360 163046582 - MGP_LPJ_P0022767 Ralgps2 protein_coding protein_coding MGP_LPJ_T0022768.1 MGP_LPJ_G0016546.1 mouse_genomes_project 1 162911068 162917424 - Ralgps2 protein_coding retained_intron MGP_LPJ_T0022769.1 MGP_LPJ_G0016546.1 mouse_genomes_project 1 162916936 163046600 - MGP_LPJ_P0022769 Ralgps2 protein_coding protein_coding MGP_LPJ_T0022770.1 MGP_LPJ_G0016546.1 mouse_genomes_project 1 162920355 163046541 - MGP_LPJ_P0022770 Ralgps2 protein_coding protein_coding MGP_LPJ_T0022771.1 MGP_LPJ_G0016546.1 mouse_genomes_project 1 162922711 163046567 - MGP_LPJ_P0022771 Ralgps2 protein_coding protein_coding MGP_LPJ_T0022772.1 MGP_LPJ_G0016546.1 mouse_genomes_project 1 162922730 163045792 - MGP_LPJ_P0022772 Ralgps2 protein_coding protein_coding MGP_LPJ_T0022773.1 MGP_LPJ_G0016546.1 mouse_genomes_project 1 162932341 162934691 - Ralgps2 protein_coding retained_intron MGP_LPJ_T0022774.1 MGP_LPJ_G0016546.1 mouse_genomes_project 1 162932395 162936535 - Ralgps2 protein_coding retained_intron MGP_LPJ_T0022777.1 MGP_LPJ_G0016546.1 mouse_genomes_project 1 162992303 163046108 - MGP_LPJ_P0022777 Ralgps2 protein_coding protein_coding MGP_LPJ_T0022778.1 MGP_LPJ_G0016546.1 mouse_genomes_project 1 163006091 163045755 - MGP_LPJ_P0022778 Ralgps2 protein_coding protein_coding MGP_LPJ_T0002844.1 MGP_LPJ_G0002694.1 mouse_genomes_project 1 63116040 63120955 - Pard3bos2 antisense antisense MGP_LPJ_T0023729.1 MGP_LPJ_G0016776.1 mouse_genomes_project 1 187191342 187273634 + MGP_LPJ_P0023729 Cnst protein_coding protein_coding MGP_LPJ_T0023730.1 MGP_LPJ_G0016776.1 mouse_genomes_project 1 187191471 187228040 + Cnst protein_coding retained_intron MGP_LPJ_T0023731.1 MGP_LPJ_G0016776.1 mouse_genomes_project 1 187191481 187247800 + Cnst protein_coding retained_intron MGP_LPJ_T0023732.1 MGP_LPJ_G0016776.1 mouse_genomes_project 1 187238493 187250185 + Cnst protein_coding processed_transcript MGP_LPJ_T0006086.1 MGP_LPJ_G0005095.1 mouse_genomes_project 1 203340969 203341320 - Gm37027 lincRNA lincRNA MGP_LPJ_T0012119.1 MGP_LPJ_G0010210.1 mouse_genomes_project 1 84861943 84862334 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098464.1 MGP_LPJ_G0036744.1 mouse_genomes_project 1 171775021 171779749 - Gm38190 sense_intronic sense_intronic MGP_LPJ_T0021952.1 MGP_LPJ_G0016384.1 mouse_genomes_project 1 136792253 136838012 - MGP_LPJ_P0021952 Mfsd4a protein_coding protein_coding MGP_LPJ_T0021953.1 MGP_LPJ_G0016384.1 mouse_genomes_project 1 136792696 136798433 - Mfsd4a protein_coding retained_intron MGP_LPJ_T0021954.1 MGP_LPJ_G0016384.1 mouse_genomes_project 1 136796058 136838066 - MGP_LPJ_P0021954 Mfsd4a protein_coding protein_coding MGP_LPJ_T0021955.1 MGP_LPJ_G0016384.1 mouse_genomes_project 1 136796207 136837927 - MGP_LPJ_P0021955 Mfsd4a protein_coding protein_coding MGP_LPJ_T0021956.1 MGP_LPJ_G0016384.1 mouse_genomes_project 1 136796207 136838064 - MGP_LPJ_P0021956 Mfsd4a protein_coding protein_coding MGP_LPJ_T0021957.1 MGP_LPJ_G0016384.1 mouse_genomes_project 1 136796234 136838163 - MGP_LPJ_P0021957 Mfsd4a protein_coding nonsense_mediated_decay MGP_LPJ_T0021958.1 MGP_LPJ_G0016384.1 mouse_genomes_project 1 136806171 136837993 - MGP_LPJ_P0021958 Mfsd4a protein_coding protein_coding MGP_LPJ_T0021959.1 MGP_LPJ_G0016384.1 mouse_genomes_project 1 136806180 136838034 - MGP_LPJ_P0021959 Mfsd4a protein_coding protein_coding MGP_LPJ_T0021960.1 MGP_LPJ_G0016384.1 mouse_genomes_project 1 136808214 136811283 - Mfsd4a protein_coding processed_transcript MGP_LPJ_T0021961.1 MGP_LPJ_G0016384.1 mouse_genomes_project 1 136808318 136838001 - MGP_LPJ_P0021961 Mfsd4a protein_coding protein_coding MGP_LPJ_T0021962.1 MGP_LPJ_G0016384.1 mouse_genomes_project 1 136810045 136815962 - Mfsd4a protein_coding retained_intron MGP_LPJ_T0021963.1 MGP_LPJ_G0016384.1 mouse_genomes_project 1 136815839 136824251 - MGP_LPJ_P0021963 Mfsd4a protein_coding nonsense_mediated_decay MGP_LPJ_T0019364.1 MGP_LPJ_G0015859.1 mouse_genomes_project 1 36904299 36914713 - MGP_LPJ_P0019364 Lyg2 protein_coding protein_coding MGP_LPJ_T0019971.1 MGP_LPJ_G0015979.1 mouse_genomes_project 1 59991136 60073787 - MGP_LPJ_P0019971 Als2 protein_coding protein_coding MGP_LPJ_T0019972.1 MGP_LPJ_G0015979.1 mouse_genomes_project 1 59992268 60073649 - MGP_LPJ_P0019972 Als2 protein_coding protein_coding MGP_LPJ_T0019973.1 MGP_LPJ_G0015979.1 mouse_genomes_project 1 60022675 60073787 - Als2 protein_coding retained_intron MGP_LPJ_T0019974.1 MGP_LPJ_G0015979.1 mouse_genomes_project 1 60048516 60073782 - MGP_LPJ_P0019974 Als2 protein_coding protein_coding MGP_LPJ_T0019975.1 MGP_LPJ_G0015979.1 mouse_genomes_project 1 60049209 60051992 - Als2 protein_coding retained_intron MGP_LPJ_T0000774.1 MGP_LPJ_G0000707.1 mouse_genomes_project 1 178594393 178599078 + TEC TEC MGP_LPJ_T0002979.1 MGP_LPJ_G0002798.1 mouse_genomes_project 1 184091656 184095964 + Gm36992 antisense antisense MGP_LPJ_T0018878.1 MGP_LPJ_G0015761.1 mouse_genomes_project 1 11764813 11914488 - MGP_LPJ_P0018878 Eya1 protein_coding protein_coding MGP_LPJ_T0018879.1 MGP_LPJ_G0015761.1 mouse_genomes_project 1 11764817 11914523 - MGP_LPJ_P0018879 Eya1 protein_coding protein_coding MGP_LPJ_T0018880.1 MGP_LPJ_G0015761.1 mouse_genomes_project 1 11765525 11914407 - MGP_LPJ_P0018880 Eya1 protein_coding protein_coding MGP_LPJ_T0018881.1 MGP_LPJ_G0015761.1 mouse_genomes_project 1 11766494 11908840 - MGP_LPJ_P0018881 Eya1 protein_coding protein_coding MGP_LPJ_T0018882.1 MGP_LPJ_G0015761.1 mouse_genomes_project 1 11808495 11832919 - MGP_LPJ_P0018882 Eya1 protein_coding protein_coding MGP_LPJ_T0018883.1 MGP_LPJ_G0015761.1 mouse_genomes_project 1 11855611 11908889 - MGP_LPJ_P0018883 Eya1 protein_coding protein_coding MGP_LPJ_T0018884.1 MGP_LPJ_G0015761.1 mouse_genomes_project 1 11875777 11908898 - MGP_LPJ_P0018884 Eya1 protein_coding protein_coding MGP_LPJ_T0018885.1 MGP_LPJ_G0015761.1 mouse_genomes_project 1 11875845 11914124 - MGP_LPJ_P0018885 Eya1 protein_coding protein_coding MGP_LPJ_T0018886.1 MGP_LPJ_G0015761.1 mouse_genomes_project 1 11905480 11914339 - Eya1 protein_coding retained_intron MGP_LPJ_T0012263.1 MGP_LPJ_G0010354.1 mouse_genomes_project 1 148147545 148149664 + processed_pseudogene processed_pseudogene MGP_LPJ_T0019577.1 MGP_LPJ_G0015905.1 mouse_genomes_project 1 43930219 44177706 + MGP_LPJ_P0019577 Gulp1 protein_coding protein_coding MGP_LPJ_T0019578.1 MGP_LPJ_G0015905.1 mouse_genomes_project 1 43930401 44168946 + MGP_LPJ_P0019578 Gulp1 protein_coding protein_coding MGP_LPJ_T0019579.1 MGP_LPJ_G0015905.1 mouse_genomes_project 1 43930401 44177694 + MGP_LPJ_P0019579 Gulp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0019580.1 MGP_LPJ_G0015905.1 mouse_genomes_project 1 43930435 44163152 + Gulp1 protein_coding processed_transcript MGP_LPJ_T0019581.1 MGP_LPJ_G0015905.1 mouse_genomes_project 1 43931305 44077371 + MGP_LPJ_P0019581 Gulp1 protein_coding protein_coding MGP_LPJ_T0019582.1 MGP_LPJ_G0015905.1 mouse_genomes_project 1 44064515 44177693 + MGP_LPJ_P0019582 Gulp1 protein_coding protein_coding MGP_LPJ_T0021878.1 MGP_LPJ_G0016367.1 mouse_genomes_project 1 135774942 135823860 - MGP_LPJ_P0021878 Mapkapk2 protein_coding protein_coding MGP_LPJ_T0021879.1 MGP_LPJ_G0016367.1 mouse_genomes_project 1 135778113 135797456 - MGP_LPJ_P0021879 Mapkapk2 protein_coding protein_coding MGP_LPJ_T0023860.1 MGP_LPJ_G0016800.1 mouse_genomes_project 1 188922120 188966776 - MGP_LPJ_P0023860 Wdr26 protein_coding protein_coding MGP_LPJ_T0023861.1 MGP_LPJ_G0016800.1 mouse_genomes_project 1 188922124 188966689 - MGP_LPJ_P0023861 Wdr26 protein_coding protein_coding MGP_LPJ_T0023862.1 MGP_LPJ_G0016800.1 mouse_genomes_project 1 188926050 188966650 - MGP_LPJ_P0023862 Wdr26 protein_coding nonsense_mediated_decay MGP_LPJ_T0023863.1 MGP_LPJ_G0016800.1 mouse_genomes_project 1 188926628 188933220 - MGP_LPJ_P0023863 Wdr26 protein_coding nonsense_mediated_decay MGP_LPJ_T0023864.1 MGP_LPJ_G0016800.1 mouse_genomes_project 1 188929360 188932693 - MGP_LPJ_P0023864 Wdr26 protein_coding protein_coding MGP_LPJ_T0023865.1 MGP_LPJ_G0016800.1 mouse_genomes_project 1 188931260 188933350 - Wdr26 protein_coding processed_transcript MGP_LPJ_T0023866.1 MGP_LPJ_G0016800.1 mouse_genomes_project 1 188937610 188942460 - Wdr26 protein_coding retained_intron MGP_LPJ_T0023867.1 MGP_LPJ_G0016800.1 mouse_genomes_project 1 188952762 188957288 - Wdr26 protein_coding retained_intron MGP_LPJ_T0012161.1 MGP_LPJ_G0010252.1 mouse_genomes_project 1 104957742 104958472 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005854.1 MGP_LPJ_G0004910.1 mouse_genomes_project 1 93094291 93095399 - Gm28722 lincRNA lincRNA MGP_LPJ_T0005842.1 MGP_LPJ_G0004899.1 mouse_genomes_project 1 91023864 91029719 + Gm28888 lincRNA lincRNA MGP_LPJ_T0002967.1 MGP_LPJ_G0002788.1 mouse_genomes_project 1 173872587 173882535 + Gm37982 antisense antisense MGP_LPJ_T0021969.1 MGP_LPJ_G0016386.1 mouse_genomes_project 1 136968310 137043315 + MGP_LPJ_P0021969 Lemd1 protein_coding protein_coding MGP_LPJ_T0021970.1 MGP_LPJ_G0016386.1 mouse_genomes_project 1 136968334 137041470 + MGP_LPJ_P0021970 Lemd1 protein_coding protein_coding MGP_LPJ_T0021971.1 MGP_LPJ_G0016386.1 mouse_genomes_project 1 136968336 136986478 + Lemd1 protein_coding processed_transcript MGP_LPJ_T0021972.1 MGP_LPJ_G0016386.1 mouse_genomes_project 1 136977842 136982715 + Lemd1 protein_coding processed_transcript MGP_LPJ_T0021973.1 MGP_LPJ_G0016386.1 mouse_genomes_project 1 136980783 136981441 + Lemd1 protein_coding processed_transcript MGP_LPJ_T0021974.1 MGP_LPJ_G0016386.1 mouse_genomes_project 1 137001910 137041277 + MGP_LPJ_P0021974 Lemd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0021975.1 MGP_LPJ_G0016386.1 mouse_genomes_project 1 137001939 137041097 + MGP_LPJ_P0021975 Lemd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0021976.1 MGP_LPJ_G0016386.1 mouse_genomes_project 1 137005696 137007131 + Lemd1 protein_coding retained_intron MGP_LPJ_T0021977.1 MGP_LPJ_G0016386.1 mouse_genomes_project 1 137005696 137041122 + MGP_LPJ_P0021977 Lemd1 protein_coding protein_coding MGP_LPJ_T0012180.1 MGP_LPJ_G0010271.1 mouse_genomes_project 1 111941023 111943495 - processed_pseudogene processed_pseudogene MGP_LPJ_T0022202.1 MGP_LPJ_G0016439.1 mouse_genomes_project 1 140254679 140275907 - MGP_LPJ_P0022202 Rnpep protein_coding protein_coding MGP_LPJ_T0022203.1 MGP_LPJ_G0016439.1 mouse_genomes_project 1 140254679 140275907 - MGP_LPJ_P0022203 Rnpep protein_coding protein_coding MGP_LPJ_T0022204.1 MGP_LPJ_G0016439.1 mouse_genomes_project 1 140257161 140259370 - Rnpep protein_coding retained_intron MGP_LPJ_T0022205.1 MGP_LPJ_G0016439.1 mouse_genomes_project 1 140258998 140263555 - Rnpep protein_coding processed_transcript MGP_LPJ_T0022206.1 MGP_LPJ_G0016439.1 mouse_genomes_project 1 140263466 140266624 - Rnpep protein_coding processed_transcript MGP_LPJ_T0022207.1 MGP_LPJ_G0016439.1 mouse_genomes_project 1 140263468 140264850 - Rnpep protein_coding retained_intron MGP_LPJ_T0022208.1 MGP_LPJ_G0016439.1 mouse_genomes_project 1 140267714 140269241 - Rnpep protein_coding retained_intron MGP_LPJ_T0022209.1 MGP_LPJ_G0016439.1 mouse_genomes_project 1 140269171 140270935 - Rnpep protein_coding retained_intron MGP_LPJ_T0022210.1 MGP_LPJ_G0016439.1 mouse_genomes_project 1 140269464 140271738 - Rnpep protein_coding retained_intron MGP_LPJ_T0002860.1 MGP_LPJ_G0002703.1 mouse_genomes_project 1 76501772 76504231 - Gm29539 antisense antisense MGP_LPJ_T0011931.1 MGP_LPJ_G0010022.1 mouse_genomes_project 1 20191799 20192246 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098770.1 MGP_LPJ_G0037033.1 mouse_genomes_project 1 111306608 111306715 - Gm24267 snRNA snRNA MGP_LPJ_T0099972.1 MGP_LPJ_G0038235.1 mouse_genomes_project 1 38633743 38633853 - Snord89 snoRNA snoRNA MGP_LPJ_T0020188.1 MGP_LPJ_G0016021.1 mouse_genomes_project 1 66196785 66215785 - MGP_LPJ_P0020188 Gm28845 protein_coding protein_coding MGP_LPJ_T0000692.1 MGP_LPJ_G0000625.1 mouse_genomes_project 1 143693269 143695673 - TEC TEC MGP_LPJ_T0023810.1 MGP_LPJ_G0016787.1 mouse_genomes_project 1 188344412 188395339 + MGP_LPJ_P0023810 Lin9 protein_coding protein_coding MGP_LPJ_T0023811.1 MGP_LPJ_G0016787.1 mouse_genomes_project 1 188344596 188395346 + MGP_LPJ_P0023811 Lin9 protein_coding protein_coding MGP_LPJ_T0023812.1 MGP_LPJ_G0016787.1 mouse_genomes_project 1 188344615 188386215 + Lin9 protein_coding retained_intron MGP_LPJ_T0023813.1 MGP_LPJ_G0016787.1 mouse_genomes_project 1 188344617 188352456 + Lin9 protein_coding processed_transcript MGP_LPJ_T0023814.1 MGP_LPJ_G0016787.1 mouse_genomes_project 1 188344622 188395339 + MGP_LPJ_P0023814 Lin9 protein_coding nonsense_mediated_decay MGP_LPJ_T0023815.1 MGP_LPJ_G0016787.1 mouse_genomes_project 1 188344628 188378675 + Lin9 protein_coding retained_intron MGP_LPJ_T0023816.1 MGP_LPJ_G0016787.1 mouse_genomes_project 1 188364485 188377727 + MGP_LPJ_P0023816 Lin9 protein_coding nonsense_mediated_decay MGP_LPJ_T0023817.1 MGP_LPJ_G0016787.1 mouse_genomes_project 1 188384044 188393471 + Lin9 protein_coding retained_intron MGP_LPJ_T0023818.1 MGP_LPJ_G0016787.1 mouse_genomes_project 1 188385475 188395339 + Lin9 protein_coding retained_intron MGP_LPJ_T0024297.1 MGP_LPJ_G0016885.1 mouse_genomes_project 1 203449936 203494844 - MGP_LPJ_P0024297 Cr2 protein_coding protein_coding MGP_LPJ_T0024298.1 MGP_LPJ_G0016885.1 mouse_genomes_project 1 203449936 203494845 - MGP_LPJ_P0024298 Cr2 protein_coding protein_coding MGP_LPJ_T0024299.1 MGP_LPJ_G0016885.1 mouse_genomes_project 1 203449942 203476939 - MGP_LPJ_P0024299 Cr2 protein_coding nonsense_mediated_decay MGP_LPJ_T0024300.1 MGP_LPJ_G0016885.1 mouse_genomes_project 1 203452445 203465600 - Cr2 protein_coding retained_intron MGP_LPJ_T0024301.1 MGP_LPJ_G0016885.1 mouse_genomes_project 1 203452792 203462953 - MGP_LPJ_P0024301 Cr2 protein_coding protein_coding MGP_LPJ_T0024302.1 MGP_LPJ_G0016885.1 mouse_genomes_project 1 203452812 203494777 - MGP_LPJ_P0024302 Cr2 protein_coding protein_coding MGP_LPJ_T0024303.1 MGP_LPJ_G0016885.1 mouse_genomes_project 1 203453885 203465691 - Cr2 protein_coding retained_intron MGP_LPJ_T0024304.1 MGP_LPJ_G0016885.1 mouse_genomes_project 1 203454224 203494739 - MGP_LPJ_P0024304 Cr2 protein_coding unknown_likely_coding MGP_LPJ_T0024305.1 MGP_LPJ_G0016885.1 mouse_genomes_project 1 203480150 203486542 - Cr2 protein_coding processed_transcript MGP_LPJ_T0024306.1 MGP_LPJ_G0016885.1 mouse_genomes_project 1 203482697 203489293 - MGP_LPJ_P0024306 Cr2 protein_coding protein_coding MGP_LPJ_T0024307.1 MGP_LPJ_G0016885.1 mouse_genomes_project 1 203482784 203494844 - Cr2 protein_coding processed_transcript MGP_LPJ_T0024308.1 MGP_LPJ_G0016885.1 mouse_genomes_project 1 203488769 203494844 - Cr2 protein_coding processed_transcript MGP_LPJ_T0019870.1 MGP_LPJ_G0015964.1 mouse_genomes_project 1 59151154 59167257 + MGP_LPJ_P0019870 Bzw1 protein_coding protein_coding MGP_LPJ_T0019871.1 MGP_LPJ_G0015964.1 mouse_genomes_project 1 59151314 59161199 + MGP_LPJ_P0019871 Bzw1 protein_coding protein_coding MGP_LPJ_T0019872.1 MGP_LPJ_G0015964.1 mouse_genomes_project 1 59151322 59165032 + MGP_LPJ_P0019872 Bzw1 protein_coding nonsense_mediated_decay MGP_LPJ_T0019873.1 MGP_LPJ_G0015964.1 mouse_genomes_project 1 59151660 59164895 + MGP_LPJ_P0019873 Bzw1 protein_coding protein_coding MGP_LPJ_T0101473.1 MGP_LPJ_G0039623.1 mouse_genomes_project 1 180742908 180747146 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0101474.1 MGP_LPJ_G0039623.1 mouse_genomes_project 1 180743237 180749445 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0002889.1 MGP_LPJ_G0002729.1 mouse_genomes_project 1 108271372 108272295 - Gm15699 antisense antisense MGP_LPJ_T0012287.1 MGP_LPJ_G0010378.1 mouse_genomes_project 1 157971428 157972233 + processed_pseudogene processed_pseudogene MGP_LPJ_T0023290.1 MGP_LPJ_G0016658.1 mouse_genomes_project 1 178009350 178024122 + MGP_LPJ_P0023290 Cfap126 protein_coding protein_coding MGP_LPJ_T0023291.1 MGP_LPJ_G0016658.1 mouse_genomes_project 1 178009421 178024072 + MGP_LPJ_P0023291 Cfap126 protein_coding protein_coding MGP_LPJ_T0023292.1 MGP_LPJ_G0016658.1 mouse_genomes_project 1 178018453 178024260 + MGP_LPJ_P0023292 Cfap126 protein_coding protein_coding MGP_LPJ_T0023293.1 MGP_LPJ_G0016658.1 mouse_genomes_project 1 178018456 178019931 + Cfap126 protein_coding processed_transcript MGP_LPJ_T0023294.1 MGP_LPJ_G0016658.1 mouse_genomes_project 1 178019451 178022858 + MGP_LPJ_P0023294 Cfap126 protein_coding protein_coding MGP_LPJ_T0023295.1 MGP_LPJ_G0016658.1 mouse_genomes_project 1 178019924 178024235 + MGP_LPJ_P0023295 Cfap126 protein_coding nonsense_mediated_decay MGP_LPJ_T0023296.1 MGP_LPJ_G0016658.1 mouse_genomes_project 1 178019948 178022902 + MGP_LPJ_P0023296 Cfap126 protein_coding nonsense_mediated_decay MGP_LPJ_T0023297.1 MGP_LPJ_G0016658.1 mouse_genomes_project 1 178021876 178023952 + MGP_LPJ_P0023297 Cfap126 protein_coding protein_coding MGP_LPJ_T0101689.1 MGP_LPJ_G0039727.1 mouse_genomes_project 1 77199012 77201148 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0009533.1 MGP_LPJ_G0007651.1 mouse_genomes_project 1 95637815 95637881 + Mir149 miRNA miRNA MGP_LPJ_T0020938.1 MGP_LPJ_G0016158.1 mouse_genomes_project 1 88442565 88455509 - MGP_LPJ_P0020938 Htr2b protein_coding protein_coding MGP_LPJ_T0020939.1 MGP_LPJ_G0016158.1 mouse_genomes_project 1 88443640 88454211 - MGP_LPJ_P0020939 Htr2b protein_coding protein_coding MGP_LPJ_T0099996.1 MGP_LPJ_G0038259.1 mouse_genomes_project 1 88709521 88709654 - Snora75 snoRNA snoRNA MGP_LPJ_T0098746.1 MGP_LPJ_G0037009.1 mouse_genomes_project 1 62439301 62439404 + Gm25839 snRNA snRNA MGP_LPJ_T0018994.1 MGP_LPJ_G0015790.1 mouse_genomes_project 1 18863985 18949543 - MGP_LPJ_P0018994 Tram2 protein_coding protein_coding MGP_LPJ_T0018995.1 MGP_LPJ_G0015790.1 mouse_genomes_project 1 18871966 18910904 - Tram2 protein_coding processed_transcript MGP_LPJ_T0006015.1 MGP_LPJ_G0005040.1 mouse_genomes_project 1 178335223 178350167 - Gm26641 lincRNA lincRNA MGP_LPJ_T0000537.1 MGP_LPJ_G0000472.1 mouse_genomes_project 1 67984484 67989074 + TEC TEC MGP_LPJ_T0100007.1 MGP_LPJ_G0038270.1 mouse_genomes_project 1 110960749 110960880 - Gm24553 snoRNA snoRNA MGP_LPJ_T0009547.1 MGP_LPJ_G0007665.1 mouse_genomes_project 1 137745674 137745795 - Gm44300 miRNA miRNA MGP_LPJ_T0022314.1 MGP_LPJ_G0016460.1 mouse_genomes_project 1 141449619 141452141 + Ddx59 protein_coding retained_intron MGP_LPJ_T0022315.1 MGP_LPJ_G0016460.1 mouse_genomes_project 1 141449619 141482079 + MGP_LPJ_P0022315 Ddx59 protein_coding protein_coding MGP_LPJ_T0022316.1 MGP_LPJ_G0016460.1 mouse_genomes_project 1 141449757 141481937 + MGP_LPJ_P0022316 Ddx59 protein_coding unknown_likely_coding MGP_LPJ_T0022317.1 MGP_LPJ_G0016460.1 mouse_genomes_project 1 141472094 141474337 + Ddx59 protein_coding processed_transcript MGP_LPJ_T0022318.1 MGP_LPJ_G0016460.1 mouse_genomes_project 1 141474313 141475987 + Ddx59 protein_coding retained_intron MGP_LPJ_T0023301.1 MGP_LPJ_G0016660.1 mouse_genomes_project 1 178050787 178062582 + MGP_LPJ_P0023301 Mpz protein_coding protein_coding MGP_LPJ_T0023302.1 MGP_LPJ_G0016660.1 mouse_genomes_project 1 178055560 178060547 + MGP_LPJ_P0023302 Mpz protein_coding protein_coding MGP_LPJ_T0023303.1 MGP_LPJ_G0016660.1 mouse_genomes_project 1 178059633 178060270 + Mpz protein_coding processed_transcript MGP_LPJ_T0023304.1 MGP_LPJ_G0016660.1 mouse_genomes_project 1 178059742 178060285 + Mpz protein_coding processed_transcript MGP_LPJ_T0022380.1 MGP_LPJ_G0016472.1 mouse_genomes_project 1 144622332 144661593 + MGP_LPJ_P0022380 Aspm protein_coding protein_coding MGP_LPJ_T0022381.1 MGP_LPJ_G0016472.1 mouse_genomes_project 1 144622333 144641839 + Aspm protein_coding retained_intron MGP_LPJ_T0022382.1 MGP_LPJ_G0016472.1 mouse_genomes_project 1 144622335 144661596 + MGP_LPJ_P0022382 Aspm protein_coding protein_coding MGP_LPJ_T0022383.1 MGP_LPJ_G0016472.1 mouse_genomes_project 1 144622379 144624695 + Aspm protein_coding retained_intron MGP_LPJ_T0022384.1 MGP_LPJ_G0016472.1 mouse_genomes_project 1 144651030 144654901 + Aspm protein_coding processed_transcript MGP_LPJ_T0012230.1 MGP_LPJ_G0010321.1 mouse_genomes_project 1 130108648 130109277 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012215.1 MGP_LPJ_G0010306.1 mouse_genomes_project 1 124109340 124109860 + processed_pseudogene processed_pseudogene MGP_LPJ_T0020774.1 MGP_LPJ_G0016124.1 mouse_genomes_project 1 81878417 81879592 - protein_coding retained_intron MGP_LPJ_T0012282.1 MGP_LPJ_G0010373.1 mouse_genomes_project 1 156229496 156229856 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012125.1 MGP_LPJ_G0010216.1 mouse_genomes_project 1 85387120 85387908 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101707.1 MGP_LPJ_G0039745.1 mouse_genomes_project 1 106414202 106511206 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0019132.1 MGP_LPJ_G0015820.1 mouse_genomes_project 1 32625795 33034421 + MGP_LPJ_P0019132 Dst protein_coding protein_coding MGP_LPJ_T0019133.1 MGP_LPJ_G0015820.1 mouse_genomes_project 1 32625842 33035422 + MGP_LPJ_P0019133 Dst protein_coding unknown_likely_coding MGP_LPJ_T0019134.1 MGP_LPJ_G0015820.1 mouse_genomes_project 1 32724261 32898953 + MGP_LPJ_P0019134 Dst protein_coding protein_coding MGP_LPJ_T0019135.1 MGP_LPJ_G0015820.1 mouse_genomes_project 1 32724263 32859588 + MGP_LPJ_P0019135 Dst protein_coding protein_coding MGP_LPJ_T0019136.1 MGP_LPJ_G0015820.1 mouse_genomes_project 1 32724507 32859589 + MGP_LPJ_P0019136 Dst protein_coding protein_coding MGP_LPJ_T0019137.1 MGP_LPJ_G0015820.1 mouse_genomes_project 1 32724561 32888008 + Dst protein_coding retained_intron MGP_LPJ_T0019138.1 MGP_LPJ_G0015820.1 mouse_genomes_project 1 32729995 33035478 + MGP_LPJ_P0019138 Dst protein_coding protein_coding MGP_LPJ_T0019139.1 MGP_LPJ_G0015820.1 mouse_genomes_project 1 32730008 33035480 + MGP_LPJ_P0019139 Dst protein_coding protein_coding MGP_LPJ_T0019140.1 MGP_LPJ_G0015820.1 mouse_genomes_project 1 32730020 33035489 + MGP_LPJ_P0019140 Dst protein_coding protein_coding MGP_LPJ_T0019141.1 MGP_LPJ_G0015820.1 mouse_genomes_project 1 32807228 32841526 + Dst protein_coding retained_intron MGP_LPJ_T0019142.1 MGP_LPJ_G0015820.1 mouse_genomes_project 1 32843956 32877705 + Dst protein_coding processed_transcript MGP_LPJ_T0019143.1 MGP_LPJ_G0015820.1 mouse_genomes_project 1 32883609 32908065 + MGP_LPJ_P0019143 Dst protein_coding protein_coding MGP_LPJ_T0019144.1 MGP_LPJ_G0015820.1 mouse_genomes_project 1 32883609 33035232 + MGP_LPJ_P0019144 Dst protein_coding protein_coding MGP_LPJ_T0019145.1 MGP_LPJ_G0015820.1 mouse_genomes_project 1 32883609 32917438 + MGP_LPJ_P0019145 Dst protein_coding protein_coding MGP_LPJ_T0019146.1 MGP_LPJ_G0015820.1 mouse_genomes_project 1 32885197 32888718 + Dst protein_coding retained_intron MGP_LPJ_T0019147.1 MGP_LPJ_G0015820.1 mouse_genomes_project 1 32903070 32907409 + Dst protein_coding retained_intron MGP_LPJ_T0019148.1 MGP_LPJ_G0015820.1 mouse_genomes_project 1 32983746 33035232 + MGP_LPJ_P0019148 Dst protein_coding protein_coding MGP_LPJ_T0019149.1 MGP_LPJ_G0015820.1 mouse_genomes_project 1 32996526 32999116 + Dst protein_coding retained_intron MGP_LPJ_T0019150.1 MGP_LPJ_G0015820.1 mouse_genomes_project 1 33020286 33030286 + MGP_LPJ_P0019150 Dst protein_coding protein_coding MGP_LPJ_T0019151.1 MGP_LPJ_G0015820.1 mouse_genomes_project 1 33021277 33033474 + MGP_LPJ_P0019151 Dst protein_coding protein_coding MGP_LPJ_T0006041.1 MGP_LPJ_G0005060.1 mouse_genomes_project 1 191359100 191359634 + Gm33973 lincRNA lincRNA MGP_LPJ_T0009554.1 MGP_LPJ_G0007672.1 mouse_genomes_project 1 157223736 157223794 + Mir7682 miRNA miRNA MGP_LPJ_T0021717.1 MGP_LPJ_G0016332.1 mouse_genomes_project 1 127602474 128378096 - MGP_LPJ_P0021717 Dpp10 protein_coding protein_coding MGP_LPJ_T0021718.1 MGP_LPJ_G0016332.1 mouse_genomes_project 1 127614321 128377699 - MGP_LPJ_P0021718 Dpp10 protein_coding protein_coding MGP_LPJ_T0021719.1 MGP_LPJ_G0016332.1 mouse_genomes_project 1 127912475 127966758 - Dpp10 protein_coding processed_transcript MGP_LPJ_T0021720.1 MGP_LPJ_G0016332.1 mouse_genomes_project 1 127935348 128377791 - Dpp10 protein_coding processed_transcript MGP_LPJ_T0012337.1 MGP_LPJ_G0010428.1 mouse_genomes_project 1 183977383 183979743 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012336.1 MGP_LPJ_G0010427.1 mouse_genomes_project 1 183664657 183665174 - processed_pseudogene processed_pseudogene MGP_LPJ_T0024146.1 MGP_LPJ_G0016858.1 mouse_genomes_project 1 199523449 199537268 - MGP_LPJ_P0024146 Nenf protein_coding protein_coding MGP_LPJ_T0098731.1 MGP_LPJ_G0036994.1 mouse_genomes_project 1 23557710 23557814 + Gm25294 snRNA snRNA MGP_LPJ_T0023998.1 MGP_LPJ_G0016830.1 mouse_genomes_project 1 193160304 193203854 - MGP_LPJ_P0023998 Iars2 protein_coding protein_coding MGP_LPJ_T0023999.1 MGP_LPJ_G0016830.1 mouse_genomes_project 1 193161143 193163822 - Iars2 protein_coding processed_transcript MGP_LPJ_T0024000.1 MGP_LPJ_G0016830.1 mouse_genomes_project 1 193170979 193203854 - MGP_LPJ_P0024000 Iars2 protein_coding protein_coding MGP_LPJ_T0024001.1 MGP_LPJ_G0016830.1 mouse_genomes_project 1 193185281 193203854 - MGP_LPJ_P0024001 Iars2 protein_coding protein_coding MGP_LPJ_T0024002.1 MGP_LPJ_G0016830.1 mouse_genomes_project 1 193195438 193203854 - Iars2 protein_coding retained_intron MGP_LPJ_T0023176.1 MGP_LPJ_G0016625.1 mouse_genomes_project 1 173223053 173245917 - MGP_LPJ_P0023176 Gm4847 protein_coding protein_coding MGP_LPJ_T0098766.1 MGP_LPJ_G0037029.1 mouse_genomes_project 1 99612211 99612318 + Gm26245 snRNA snRNA MGP_LPJ_T0011986.1 MGP_LPJ_G0010077.1 mouse_genomes_project 1 38345778 38346061 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023828.1 MGP_LPJ_G0016791.1 mouse_genomes_project 1 188575120 188596869 + MGP_LPJ_P0023828 Sde2 protein_coding protein_coding MGP_LPJ_T0023829.1 MGP_LPJ_G0016791.1 mouse_genomes_project 1 188590855 188595009 + Sde2 protein_coding retained_intron MGP_LPJ_T0009541.1 MGP_LPJ_G0007659.1 mouse_genomes_project 1 109966427 109966563 - Mir3473f miRNA miRNA MGP_LPJ_T0005862.1 MGP_LPJ_G0004918.1 mouse_genomes_project 1 95076806 95082568 + Gm29099 lincRNA lincRNA MGP_LPJ_T0005879.1 MGP_LPJ_G0004932.1 mouse_genomes_project 1 105096462 105098588 - Gm28187 lincRNA lincRNA MGP_LPJ_T0005809.1 MGP_LPJ_G0004873.1 mouse_genomes_project 1 75030004 75064365 + D530049I02Rik lincRNA lincRNA MGP_LPJ_T0019738.1 MGP_LPJ_G0015937.1 mouse_genomes_project 1 54244164 54264401 - MGP_LPJ_P0019738 Stk17b protein_coding protein_coding MGP_LPJ_T0019739.1 MGP_LPJ_G0015937.1 mouse_genomes_project 1 54248343 54250464 - Stk17b protein_coding retained_intron MGP_LPJ_T0019603.1 MGP_LPJ_G0015909.1 mouse_genomes_project 1 45268336 45269085 - Gm5269 protein_coding translated_processed_pseudogene MGP_LPJ_T0019604.1 MGP_LPJ_G0015909.1 mouse_genomes_project 1 45268752 45268890 - MGP_LPJ_P0019604 Gm5269 protein_coding protein_coding MGP_LPJ_T0000435.1 MGP_LPJ_G0000373.1 mouse_genomes_project 1 21237599 21238322 - TEC TEC MGP_LPJ_T0000436.1 MGP_LPJ_G0000373.1 mouse_genomes_project 1 21237901 21238321 - TEC TEC MGP_LPJ_T0000723.1 MGP_LPJ_G0000656.1 mouse_genomes_project 1 161876846 161877081 + TEC TEC MGP_LPJ_T0098727.1 MGP_LPJ_G0036990.1 mouse_genomes_project 1 9889845 9889952 + Gm22633 snRNA snRNA MGP_LPJ_T0012000.1 MGP_LPJ_G0010091.1 mouse_genomes_project 1 44217920 44218381 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099965.1 MGP_LPJ_G0038228.1 mouse_genomes_project 1 21227153 21227274 + Gm24176 snoRNA snoRNA MGP_LPJ_T0012124.1 MGP_LPJ_G0010215.1 mouse_genomes_project 1 85296073 85296914 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012344.1 MGP_LPJ_G0010435.1 mouse_genomes_project 1 187182995 187183514 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011893.1 MGP_LPJ_G0009984.1 mouse_genomes_project 1 6887151 6888321 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000444.1 MGP_LPJ_G0000380.1 mouse_genomes_project 1 23424947 23427478 - TEC TEC MGP_LPJ_T0024178.1 MGP_LPJ_G0016866.1 mouse_genomes_project 1 200237368 200248409 + MGP_LPJ_P0024178 Rd3 protein_coding protein_coding MGP_LPJ_T0024179.1 MGP_LPJ_G0016866.1 mouse_genomes_project 1 200237371 200246391 + MGP_LPJ_P0024179 Rd3 protein_coding protein_coding MGP_LPJ_T0024180.1 MGP_LPJ_G0016866.1 mouse_genomes_project 1 200238249 200246390 + MGP_LPJ_P0024180 Rd3 protein_coding protein_coding MGP_LPJ_T0024181.1 MGP_LPJ_G0016866.1 mouse_genomes_project 1 200244168 200246391 + Rd3 protein_coding retained_intron MGP_LPJ_T0011921.1 MGP_LPJ_G0010012.1 mouse_genomes_project 1 17138694 17139166 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012304.1 MGP_LPJ_G0010395.1 mouse_genomes_project 1 167222895 167223360 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021067.1 MGP_LPJ_G0016185.1 mouse_genomes_project 1 90166176 90191632 + MGP_LPJ_P0021067 Atg16l1 protein_coding protein_coding MGP_LPJ_T0021068.1 MGP_LPJ_G0016185.1 mouse_genomes_project 1 90166319 90216600 + MGP_LPJ_P0021068 Atg16l1 protein_coding protein_coding MGP_LPJ_T0021069.1 MGP_LPJ_G0016185.1 mouse_genomes_project 1 90166362 90189699 + Atg16l1 protein_coding retained_intron MGP_LPJ_T0021070.1 MGP_LPJ_G0016185.1 mouse_genomes_project 1 90166382 90210372 + Atg16l1 protein_coding retained_intron MGP_LPJ_T0021071.1 MGP_LPJ_G0016185.1 mouse_genomes_project 1 90166382 90216594 + MGP_LPJ_P0021071 Atg16l1 protein_coding protein_coding MGP_LPJ_T0021072.1 MGP_LPJ_G0016185.1 mouse_genomes_project 1 90166392 90216597 + MGP_LPJ_P0021072 Atg16l1 protein_coding protein_coding MGP_LPJ_T0021073.1 MGP_LPJ_G0016185.1 mouse_genomes_project 1 90166394 90216597 + Atg16l1 protein_coding retained_intron MGP_LPJ_T0021074.1 MGP_LPJ_G0016185.1 mouse_genomes_project 1 90166399 90183876 + Atg16l1 protein_coding retained_intron MGP_LPJ_T0021075.1 MGP_LPJ_G0016185.1 mouse_genomes_project 1 90182793 90199365 + Atg16l1 protein_coding retained_intron MGP_LPJ_T0021076.1 MGP_LPJ_G0016185.1 mouse_genomes_project 1 90199787 90203183 + Atg16l1 protein_coding retained_intron MGP_LPJ_T0021077.1 MGP_LPJ_G0016185.1 mouse_genomes_project 1 90202682 90212734 + Atg16l1 protein_coding retained_intron MGP_LPJ_T0019494.1 MGP_LPJ_G0015889.1 mouse_genomes_project 1 42149868 42208353 + MGP_LPJ_P0019494 Mrps9 protein_coding protein_coding MGP_LPJ_T0019495.1 MGP_LPJ_G0015889.1 mouse_genomes_project 1 42149870 42202343 + Mrps9 protein_coding processed_transcript MGP_LPJ_T0019496.1 MGP_LPJ_G0015889.1 mouse_genomes_project 1 42149870 42204677 + Mrps9 protein_coding processed_transcript MGP_LPJ_T0019497.1 MGP_LPJ_G0015889.1 mouse_genomes_project 1 42149879 42183629 + Mrps9 protein_coding retained_intron MGP_LPJ_T0019498.1 MGP_LPJ_G0015889.1 mouse_genomes_project 1 42162951 42201792 + Mrps9 protein_coding retained_intron MGP_LPJ_T0019499.1 MGP_LPJ_G0015889.1 mouse_genomes_project 1 42190400 42208347 + MGP_LPJ_P0019499 Mrps9 protein_coding nonsense_mediated_decay MGP_LPJ_T0019500.1 MGP_LPJ_G0015889.1 mouse_genomes_project 1 42205720 42208347 + Mrps9 protein_coding retained_intron MGP_LPJ_T0002946.1 MGP_LPJ_G0002772.1 mouse_genomes_project 1 166215132 166218476 - Gm38039 antisense antisense MGP_LPJ_T0099977.1 MGP_LPJ_G0038240.1 mouse_genomes_project 1 51922123 51922245 - Gm27607 snoRNA snoRNA MGP_LPJ_T0011968.1 MGP_LPJ_G0010059.1 mouse_genomes_project 1 33282411 33282886 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100030.1 MGP_LPJ_G0038293.1 mouse_genomes_project 1 167206074 167206195 - Gm24988 snoRNA snoRNA MGP_LPJ_T0000845.1 MGP_LPJ_G0000775.1 mouse_genomes_project 1 203537187 203539903 - TEC TEC MGP_LPJ_T0006069.1 MGP_LPJ_G0005080.1 mouse_genomes_project 1 196279885 196292642 + Gm38064 lincRNA lincRNA MGP_LPJ_T0002981.1 MGP_LPJ_G0002800.1 mouse_genomes_project 1 184793621 184794368 - Gm26801 antisense antisense MGP_LPJ_T0002982.1 MGP_LPJ_G0002800.1 mouse_genomes_project 1 184794330 184809509 - Gm26801 antisense antisense MGP_LPJ_T0000659.1 MGP_LPJ_G0000594.1 mouse_genomes_project 1 135178962 135180490 + TEC TEC MGP_LPJ_T0011993.1 MGP_LPJ_G0010084.1 mouse_genomes_project 1 43242410 43242955 + processed_pseudogene processed_pseudogene MGP_LPJ_T0022954.1 MGP_LPJ_G0016577.1 mouse_genomes_project 1 168986299 169008625 - MGP_LPJ_P0022954 Mettl13 protein_coding protein_coding MGP_LPJ_T0022955.1 MGP_LPJ_G0016577.1 mouse_genomes_project 1 168987851 169008596 - MGP_LPJ_P0022955 Mettl13 protein_coding nonsense_mediated_decay MGP_LPJ_T0022956.1 MGP_LPJ_G0016577.1 mouse_genomes_project 1 168990014 169004436 - MGP_LPJ_P0022956 Mettl13 protein_coding protein_coding MGP_LPJ_T0022957.1 MGP_LPJ_G0016577.1 mouse_genomes_project 1 168991315 169008330 - Mettl13 protein_coding processed_transcript MGP_LPJ_T0022958.1 MGP_LPJ_G0016577.1 mouse_genomes_project 1 168998992 169006601 - MGP_LPJ_P0022958 Mettl13 protein_coding nonsense_mediated_decay MGP_LPJ_T0022959.1 MGP_LPJ_G0016577.1 mouse_genomes_project 1 169001522 169008612 - Mettl13 protein_coding retained_intron MGP_LPJ_T0022960.1 MGP_LPJ_G0016577.1 mouse_genomes_project 1 169003709 169008602 - Mettl13 protein_coding retained_intron MGP_LPJ_T0022961.1 MGP_LPJ_G0016577.1 mouse_genomes_project 1 169006901 169008603 - Mettl13 protein_coding retained_intron MGP_LPJ_T0021587.1 MGP_LPJ_G0016306.1 mouse_genomes_project 1 115598687 115604753 - Dsel protein_coding processed_transcript MGP_LPJ_T0021588.1 MGP_LPJ_G0016306.1 mouse_genomes_project 1 115598691 115604903 - MGP_LPJ_P0021588 Dsel protein_coding protein_coding MGP_LPJ_T0021589.1 MGP_LPJ_G0016306.1 mouse_genomes_project 1 115603308 115604868 - Dsel protein_coding processed_transcript MGP_LPJ_T0021590.1 MGP_LPJ_G0016306.1 mouse_genomes_project 1 115604080 115604865 - Dsel protein_coding processed_transcript MGP_LPJ_T0012325.1 MGP_LPJ_G0010416.1 mouse_genomes_project 1 176142005 176142444 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005843.1 MGP_LPJ_G0004900.1 mouse_genomes_project 1 91119984 91131480 + Gm19589 lincRNA lincRNA MGP_LPJ_T0012363.1 MGP_LPJ_G0010454.1 mouse_genomes_project 1 197779744 197779885 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021540.1 MGP_LPJ_G0016291.1 mouse_genomes_project 1 110141897 110178521 - MGP_LPJ_P0021540 Kdsr protein_coding protein_coding MGP_LPJ_T0021541.1 MGP_LPJ_G0016291.1 mouse_genomes_project 1 110166343 110178493 - Kdsr protein_coding retained_intron MGP_LPJ_T0021542.1 MGP_LPJ_G0016291.1 mouse_genomes_project 1 110175895 110178477 - Kdsr protein_coding retained_intron MGP_LPJ_T0000480.1 MGP_LPJ_G0000415.1 mouse_genomes_project 1 35373941 35376100 + TEC TEC MGP_LPJ_T0002815.1 MGP_LPJ_G0002672.1 mouse_genomes_project 1 38743549 38750811 + D930019O06Rik antisense antisense MGP_LPJ_T0101220.1 MGP_LPJ_G0039481.1 mouse_genomes_project 1 45399143 45414206 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101221.1 MGP_LPJ_G0039481.1 mouse_genomes_project 1 45399486 45414174 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101222.1 MGP_LPJ_G0039481.1 mouse_genomes_project 1 45399486 45414174 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101223.1 MGP_LPJ_G0039481.1 mouse_genomes_project 1 45413367 45413983 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0000568.1 MGP_LPJ_G0000503.1 mouse_genomes_project 1 82729888 82731721 - TEC TEC MGP_LPJ_T0099986.1 MGP_LPJ_G0038249.1 mouse_genomes_project 1 64044134 64044248 + Gm24942 snoRNA snoRNA MGP_LPJ_T0011909.1 MGP_LPJ_G0010000.1 mouse_genomes_project 1 14382474 14383157 - processed_pseudogene processed_pseudogene MGP_LPJ_T0019463.1 MGP_LPJ_G0015880.1 mouse_genomes_project 1 39445301 39450133 + Il1rl2 protein_coding retained_intron MGP_LPJ_T0019464.1 MGP_LPJ_G0015880.1 mouse_genomes_project 1 39445318 39487559 + MGP_LPJ_P0019464 Il1rl2 protein_coding protein_coding MGP_LPJ_T0019465.1 MGP_LPJ_G0015880.1 mouse_genomes_project 1 39445381 39489650 + MGP_LPJ_P0019465 Il1rl2 protein_coding protein_coding MGP_LPJ_T0019466.1 MGP_LPJ_G0015880.1 mouse_genomes_project 1 39446302 39449863 + MGP_LPJ_P0019466 Il1rl2 protein_coding protein_coding MGP_LPJ_T0000484.1 MGP_LPJ_G0000419.1 mouse_genomes_project 1 36291874 36292408 - TEC TEC MGP_LPJ_T0012331.1 MGP_LPJ_G0010422.1 mouse_genomes_project 1 178446652 178446822 + processed_pseudogene processed_pseudogene MGP_LPJ_T0019945.1 MGP_LPJ_G0015975.1 mouse_genomes_project 1 59799556 59807291 + Stradb protein_coding retained_intron MGP_LPJ_T0019946.1 MGP_LPJ_G0015975.1 mouse_genomes_project 1 59799556 59813669 + Stradb protein_coding retained_intron MGP_LPJ_T0019947.1 MGP_LPJ_G0015975.1 mouse_genomes_project 1 59799556 59819061 + MGP_LPJ_P0019947 Stradb protein_coding protein_coding MGP_LPJ_T0019948.1 MGP_LPJ_G0015975.1 mouse_genomes_project 1 59799556 59823218 + MGP_LPJ_P0019948 Stradb protein_coding protein_coding MGP_LPJ_T0019949.1 MGP_LPJ_G0015975.1 mouse_genomes_project 1 59799556 59822625 + MGP_LPJ_P0019949 Stradb protein_coding nonsense_mediated_decay MGP_LPJ_T0019950.1 MGP_LPJ_G0015975.1 mouse_genomes_project 1 59799556 59822500 + MGP_LPJ_P0019950 Stradb protein_coding nonsense_mediated_decay MGP_LPJ_T0019951.1 MGP_LPJ_G0015975.1 mouse_genomes_project 1 59816852 59821862 + MGP_LPJ_P0019951 Stradb protein_coding protein_coding MGP_LPJ_T0000790.1 MGP_LPJ_G0000723.1 mouse_genomes_project 1 184528511 184531276 - TEC TEC MGP_LPJ_T0022185.1 MGP_LPJ_G0016433.1 mouse_genomes_project 1 139931963 139944833 + MGP_LPJ_P0022185 Ube2t protein_coding protein_coding MGP_LPJ_T0022186.1 MGP_LPJ_G0016433.1 mouse_genomes_project 1 139931989 139935233 + Ube2t protein_coding retained_intron MGP_LPJ_T0022187.1 MGP_LPJ_G0016433.1 mouse_genomes_project 1 139940677 139944830 + MGP_LPJ_P0022187 Ube2t protein_coding protein_coding MGP_LPJ_T0022188.1 MGP_LPJ_G0016433.1 mouse_genomes_project 1 139942626 139943528 + Ube2t protein_coding retained_intron MGP_LPJ_T0019740.1 MGP_LPJ_G0015938.1 mouse_genomes_project 1 54294526 54698133 - MGP_LPJ_P0019740 Hecw2 protein_coding protein_coding MGP_LPJ_T0019741.1 MGP_LPJ_G0015938.1 mouse_genomes_project 1 54294532 54699119 - MGP_LPJ_P0019741 Hecw2 protein_coding protein_coding MGP_LPJ_T0019742.1 MGP_LPJ_G0015938.1 mouse_genomes_project 1 54325935 54334291 - Hecw2 protein_coding processed_transcript MGP_LPJ_T0019743.1 MGP_LPJ_G0015938.1 mouse_genomes_project 1 54332136 54364954 - Hecw2 protein_coding processed_transcript MGP_LPJ_T0019744.1 MGP_LPJ_G0015938.1 mouse_genomes_project 1 54425574 54699119 - MGP_LPJ_P0019744 Hecw2 protein_coding protein_coding MGP_LPJ_T0019745.1 MGP_LPJ_G0015938.1 mouse_genomes_project 1 54436262 54699253 - Hecw2 protein_coding retained_intron MGP_LPJ_T0023339.1 MGP_LPJ_G0016668.1 mouse_genomes_project 1 178177099 178183631 + MGP_LPJ_P0023339 B4galt3 protein_coding protein_coding MGP_LPJ_T0023340.1 MGP_LPJ_G0016668.1 mouse_genomes_project 1 178177110 178181050 + MGP_LPJ_P0023340 B4galt3 protein_coding protein_coding MGP_LPJ_T0023341.1 MGP_LPJ_G0016668.1 mouse_genomes_project 1 178177114 178183632 + MGP_LPJ_P0023341 B4galt3 protein_coding protein_coding MGP_LPJ_T0023342.1 MGP_LPJ_G0016668.1 mouse_genomes_project 1 178177114 178178701 + MGP_LPJ_P0023342 B4galt3 protein_coding protein_coding MGP_LPJ_T0023343.1 MGP_LPJ_G0016668.1 mouse_genomes_project 1 178177125 178178802 + B4galt3 protein_coding retained_intron MGP_LPJ_T0023344.1 MGP_LPJ_G0016668.1 mouse_genomes_project 1 178177136 178183631 + MGP_LPJ_P0023344 B4galt3 protein_coding protein_coding MGP_LPJ_T0023345.1 MGP_LPJ_G0016668.1 mouse_genomes_project 1 178177145 178183632 + B4galt3 protein_coding retained_intron MGP_LPJ_T0023346.1 MGP_LPJ_G0016668.1 mouse_genomes_project 1 178177179 178178131 + B4galt3 protein_coding processed_transcript MGP_LPJ_T0023347.1 MGP_LPJ_G0016668.1 mouse_genomes_project 1 178177589 178178404 + B4galt3 protein_coding retained_intron MGP_LPJ_T0023348.1 MGP_LPJ_G0016668.1 mouse_genomes_project 1 178178401 178179366 + MGP_LPJ_P0023348 B4galt3 protein_coding protein_coding MGP_LPJ_T0023349.1 MGP_LPJ_G0016668.1 mouse_genomes_project 1 178180277 178183630 + B4galt3 protein_coding retained_intron MGP_LPJ_T0020807.1 MGP_LPJ_G0016133.1 mouse_genomes_project 1 84620807 84678392 + Col4a3 protein_coding retained_intron MGP_LPJ_T0020808.1 MGP_LPJ_G0016133.1 mouse_genomes_project 1 84620862 84758670 + MGP_LPJ_P0020808 Col4a3 protein_coding protein_coding MGP_LPJ_T0020809.1 MGP_LPJ_G0016133.1 mouse_genomes_project 1 84750214 84754592 + MGP_LPJ_P0020809 Col4a3 protein_coding protein_coding MGP_LPJ_T0020810.1 MGP_LPJ_G0016133.1 mouse_genomes_project 1 84750214 84753783 + MGP_LPJ_P0020810 Col4a3 protein_coding nonsense_mediated_decay MGP_LPJ_T0018932.1 MGP_LPJ_G0015772.1 mouse_genomes_project 1 14361202 14376378 - MGP_LPJ_P0018932 Tceb1 protein_coding protein_coding MGP_LPJ_T0018933.1 MGP_LPJ_G0015772.1 mouse_genomes_project 1 14362244 14376536 - MGP_LPJ_P0018933 Tceb1 protein_coding protein_coding MGP_LPJ_T0018934.1 MGP_LPJ_G0015772.1 mouse_genomes_project 1 14362619 14376512 - MGP_LPJ_P0018934 Tceb1 protein_coding protein_coding MGP_LPJ_T0018935.1 MGP_LPJ_G0015772.1 mouse_genomes_project 1 14362646 14376532 - MGP_LPJ_P0018935 Tceb1 protein_coding protein_coding MGP_LPJ_T0018936.1 MGP_LPJ_G0015772.1 mouse_genomes_project 1 14362668 14376408 - MGP_LPJ_P0018936 Tceb1 protein_coding protein_coding MGP_LPJ_T0018937.1 MGP_LPJ_G0015772.1 mouse_genomes_project 1 14362819 14367537 - MGP_LPJ_P0018937 Tceb1 protein_coding protein_coding MGP_LPJ_T0018938.1 MGP_LPJ_G0015772.1 mouse_genomes_project 1 14362949 14376119 - MGP_LPJ_P0018938 Tceb1 protein_coding protein_coding MGP_LPJ_T0018939.1 MGP_LPJ_G0015772.1 mouse_genomes_project 1 14366333 14376394 - Tceb1 protein_coding retained_intron MGP_LPJ_T0018940.1 MGP_LPJ_G0015772.1 mouse_genomes_project 1 14366452 14376409 - Tceb1 protein_coding retained_intron MGP_LPJ_T0018941.1 MGP_LPJ_G0015772.1 mouse_genomes_project 1 14367178 14376372 - Tceb1 protein_coding retained_intron MGP_LPJ_T0018942.1 MGP_LPJ_G0015772.1 mouse_genomes_project 1 14367233 14376536 - Tceb1 protein_coding retained_intron MGP_LPJ_T0023200.1 MGP_LPJ_G0016631.1 mouse_genomes_project 1 174009962 174031968 - MGP_LPJ_P0023200 Mgst3 protein_coding protein_coding MGP_LPJ_T0011902.1 MGP_LPJ_G0009993.1 mouse_genomes_project 1 9630200 9631073 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100038.1 MGP_LPJ_G0038301.1 mouse_genomes_project 1 167378510 167378587 + Snord80 snoRNA snoRNA MGP_LPJ_T0000500.1 MGP_LPJ_G0000435.1 mouse_genomes_project 1 46635315 46639185 - TEC TEC MGP_LPJ_T0019590.1 MGP_LPJ_G0015907.1 mouse_genomes_project 1 44763930 44896971 - MGP_LPJ_P0019590 Col5a2 protein_coding protein_coding MGP_LPJ_T0019591.1 MGP_LPJ_G0015907.1 mouse_genomes_project 1 44779696 44784298 - Col5a2 protein_coding retained_intron MGP_LPJ_T0019592.1 MGP_LPJ_G0015907.1 mouse_genomes_project 1 44805321 44896971 - Col5a2 protein_coding retained_intron MGP_LPJ_T0019593.1 MGP_LPJ_G0015907.1 mouse_genomes_project 1 44809613 44814615 - Col5a2 protein_coding retained_intron MGP_LPJ_T0101711.1 MGP_LPJ_G0039749.1 mouse_genomes_project 1 110690009 110691952 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0021351.1 MGP_LPJ_G0016251.1 mouse_genomes_project 1 95942635 95952236 - MGP_LPJ_P0021351 2310007B03Rik protein_coding protein_coding MGP_LPJ_T0021352.1 MGP_LPJ_G0016251.1 mouse_genomes_project 1 95942869 95952158 - MGP_LPJ_P0021352 2310007B03Rik protein_coding protein_coding MGP_LPJ_T0005745.1 MGP_LPJ_G0004825.1 mouse_genomes_project 1 50291037 50291565 - Gm29665 lincRNA lincRNA MGP_LPJ_T0022070.1 MGP_LPJ_G0016407.1 mouse_genomes_project 1 138481599 138488768 - MGP_LPJ_P0022070 Snrpe protein_coding nonsense_mediated_decay MGP_LPJ_T0022071.1 MGP_LPJ_G0016407.1 mouse_genomes_project 1 138481724 138488938 - MGP_LPJ_P0022071 Snrpe protein_coding protein_coding MGP_LPJ_T0022072.1 MGP_LPJ_G0016407.1 mouse_genomes_project 1 138483790 138488970 - MGP_LPJ_P0022072 Snrpe protein_coding protein_coding MGP_LPJ_T0022073.1 MGP_LPJ_G0016407.1 mouse_genomes_project 1 138484226 138488646 - MGP_LPJ_P0022073 Snrpe protein_coding protein_coding MGP_LPJ_T0022074.1 MGP_LPJ_G0016407.1 mouse_genomes_project 1 138487581 138488936 - MGP_LPJ_P0022074 Snrpe protein_coding protein_coding MGP_LPJ_T0006040.1 MGP_LPJ_G0005059.1 mouse_genomes_project 1 191258496 191258879 + Gm37986 lincRNA lincRNA MGP_LPJ_T0023440.1 MGP_LPJ_G0016688.1 mouse_genomes_project 1 178810335 178816157 + MGP_LPJ_P0023440 Gm10521 protein_coding protein_coding MGP_LPJ_T0005856.1 MGP_LPJ_G0004912.1 mouse_genomes_project 1 93669901 93670709 - Gm28199 lincRNA lincRNA MGP_LPJ_T0012079.1 MGP_LPJ_G0010170.1 mouse_genomes_project 1 66026106 66026485 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005742.1 MGP_LPJ_G0004823.1 mouse_genomes_project 1 46890410 46929877 + Gm28826 lincRNA lincRNA MGP_LPJ_T0019811.1 MGP_LPJ_G0015951.1 mouse_genomes_project 1 55974240 56349172 + MGP_LPJ_P0019811 Plcl1 protein_coding protein_coding MGP_LPJ_T0019812.1 MGP_LPJ_G0015951.1 mouse_genomes_project 1 56292792 56329558 + Plcl1 protein_coding processed_transcript MGP_LPJ_T0011280.1 MGP_LPJ_G0009398.1 mouse_genomes_project 1 203179518 203179812 + Gm23885 misc_RNA misc_RNA MGP_LPJ_T0022580.1 MGP_LPJ_G0016512.1 mouse_genomes_project 1 159035910 159103914 - MGP_LPJ_P0022580 Lamc2 protein_coding protein_coding MGP_LPJ_T0022581.1 MGP_LPJ_G0016512.1 mouse_genomes_project 1 159035910 159103514 - MGP_LPJ_P0022581 Lamc2 protein_coding protein_coding MGP_LPJ_T0022582.1 MGP_LPJ_G0016512.1 mouse_genomes_project 1 159037327 159040389 - Lamc2 protein_coding retained_intron MGP_LPJ_T0022583.1 MGP_LPJ_G0016512.1 mouse_genomes_project 1 159039252 159042157 - MGP_LPJ_P0022583 Lamc2 protein_coding protein_coding MGP_LPJ_T0022584.1 MGP_LPJ_G0016512.1 mouse_genomes_project 1 159064251 159066138 - Lamc2 protein_coding retained_intron MGP_LPJ_T0022585.1 MGP_LPJ_G0016512.1 mouse_genomes_project 1 159071362 159103914 - Lamc2 protein_coding retained_intron MGP_LPJ_T0021538.1 MGP_LPJ_G0016290.1 mouse_genomes_project 1 109958127 110135746 - MGP_LPJ_P0021538 Bcl2 protein_coding protein_coding MGP_LPJ_T0021539.1 MGP_LPJ_G0016290.1 mouse_genomes_project 1 110131828 110134651 - MGP_LPJ_P0021539 Bcl2 protein_coding protein_coding MGP_LPJ_T0002831.1 MGP_LPJ_G0002685.1 mouse_genomes_project 1 55780043 55792193 + Gm10561 antisense antisense MGP_LPJ_T0023989.1 MGP_LPJ_G0016827.1 mouse_genomes_project 1 192727270 192738471 - MGP_LPJ_P0023989 C130074G19Rik protein_coding protein_coding MGP_LPJ_T0012334.1 MGP_LPJ_G0010425.1 mouse_genomes_project 1 179024903 179025233 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011908.1 MGP_LPJ_G0009999.1 mouse_genomes_project 1 13732194 13732747 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000839.1 MGP_LPJ_G0000769.1 mouse_genomes_project 1 202987528 202991092 + TEC TEC MGP_LPJ_T0000583.1 MGP_LPJ_G0000518.1 mouse_genomes_project 1 89027462 89029716 + TEC TEC MGP_LPJ_T0023150.1 MGP_LPJ_G0016618.1 mouse_genomes_project 1 172697573 172730602 - MGP_LPJ_P0023150 Dusp27 protein_coding protein_coding MGP_LPJ_T0023151.1 MGP_LPJ_G0016618.1 mouse_genomes_project 1 172697578 172730576 - MGP_LPJ_P0023151 Dusp27 protein_coding protein_coding MGP_LPJ_T0005929.1 MGP_LPJ_G0004972.1 mouse_genomes_project 1 139372634 139376604 + Platr1 lincRNA lincRNA MGP_LPJ_T0002928.1 MGP_LPJ_G0002757.1 mouse_genomes_project 1 145877499 145974372 - 4930590L20Rik antisense antisense MGP_LPJ_T0098810.1 MGP_LPJ_G0037073.1 mouse_genomes_project 1 189603149 189603243 - Gm23690 snRNA snRNA MGP_LPJ_T0000618.1 MGP_LPJ_G0000553.1 mouse_genomes_project 1 109621711 109626664 + TEC TEC MGP_LPJ_T0000755.1 MGP_LPJ_G0000688.1 mouse_genomes_project 1 167324705 167325873 + TEC TEC MGP_LPJ_T0012350.1 MGP_LPJ_G0010441.1 mouse_genomes_project 1 189169611 189169904 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023322.1 MGP_LPJ_G0016664.1 mouse_genomes_project 1 178126939 178128264 + MGP_LPJ_P0023322 Apoa2 protein_coding protein_coding MGP_LPJ_T0023323.1 MGP_LPJ_G0016664.1 mouse_genomes_project 1 178126967 178128263 + MGP_LPJ_P0023323 Apoa2 protein_coding protein_coding MGP_LPJ_T0023324.1 MGP_LPJ_G0016664.1 mouse_genomes_project 1 178126969 178128258 + MGP_LPJ_P0023324 Apoa2 protein_coding protein_coding MGP_LPJ_T0023325.1 MGP_LPJ_G0016664.1 mouse_genomes_project 1 178126976 178128222 + MGP_LPJ_P0023325 Apoa2 protein_coding protein_coding MGP_LPJ_T0022109.1 MGP_LPJ_G0016416.1 mouse_genomes_project 1 138991705 138995656 - MGP_LPJ_P0022109 Btg2 protein_coding protein_coding MGP_LPJ_T0022090.1 MGP_LPJ_G0016411.1 mouse_genomes_project 1 138563401 138574403 - MGP_LPJ_P0022090 Lax1 protein_coding protein_coding MGP_LPJ_T0022091.1 MGP_LPJ_G0016411.1 mouse_genomes_project 1 138564770 138574381 - MGP_LPJ_P0022091 Lax1 protein_coding protein_coding MGP_LPJ_T0019646.1 MGP_LPJ_G0015919.1 mouse_genomes_project 1 51972148 52112981 + MGP_LPJ_P0019646 Stat4 protein_coding protein_coding MGP_LPJ_T0019647.1 MGP_LPJ_G0015919.1 mouse_genomes_project 1 52009692 52112976 + MGP_LPJ_P0019647 Stat4 protein_coding protein_coding MGP_LPJ_T0019648.1 MGP_LPJ_G0015919.1 mouse_genomes_project 1 52010075 52075839 + Stat4 protein_coding retained_intron MGP_LPJ_T0019649.1 MGP_LPJ_G0015919.1 mouse_genomes_project 1 52111248 52112980 + Stat4 protein_coding retained_intron MGP_LPJ_T0024137.1 MGP_LPJ_G0016855.1 mouse_genomes_project 1 199295435 199309790 + Batf3 protein_coding processed_transcript MGP_LPJ_T0024138.1 MGP_LPJ_G0016855.1 mouse_genomes_project 1 199295468 199310249 + Batf3 protein_coding processed_transcript MGP_LPJ_T0024139.1 MGP_LPJ_G0016855.1 mouse_genomes_project 1 199296274 199310247 + MGP_LPJ_P0024139 Batf3 protein_coding protein_coding MGP_LPJ_T0024140.1 MGP_LPJ_G0016855.1 mouse_genomes_project 1 199296332 199309790 + Batf3 protein_coding processed_transcript MGP_LPJ_T0024141.1 MGP_LPJ_G0016855.1 mouse_genomes_project 1 199298407 199310213 + Batf3 protein_coding retained_intron MGP_LPJ_T0011865.1 MGP_LPJ_G0009956.1 mouse_genomes_project 1 1899222 1900428 - processed_pseudogene processed_pseudogene MGP_LPJ_T0021143.1 MGP_LPJ_G0016206.1 mouse_genomes_project 1 92045069 92498243 + MGP_LPJ_P0021143 Agap1 protein_coding protein_coding MGP_LPJ_T0021144.1 MGP_LPJ_G0016206.1 mouse_genomes_project 1 92045137 92490627 + MGP_LPJ_P0021144 Agap1 protein_coding protein_coding MGP_LPJ_T0021145.1 MGP_LPJ_G0016206.1 mouse_genomes_project 1 92045519 92049904 + Agap1 protein_coding retained_intron MGP_LPJ_T0021146.1 MGP_LPJ_G0016206.1 mouse_genomes_project 1 92174349 92495903 + MGP_LPJ_P0021146 Agap1 protein_coding protein_coding MGP_LPJ_T0021147.1 MGP_LPJ_G0016206.1 mouse_genomes_project 1 92174860 92490610 + MGP_LPJ_P0021147 Agap1 protein_coding unknown_likely_coding MGP_LPJ_T0020800.1 MGP_LPJ_G0016130.1 mouse_genomes_project 1 84271289 84274111 + MGP_LPJ_P0020800 Gm9747 protein_coding protein_coding MGP_LPJ_T0000396.1 MGP_LPJ_G0000334.1 mouse_genomes_project 1 2625171 2627203 + TEC TEC MGP_LPJ_T0098453.1 MGP_LPJ_G0036733.1 mouse_genomes_project 1 108947865 108948318 - Gm28404 sense_intronic sense_intronic MGP_LPJ_T0098742.1 MGP_LPJ_G0037005.1 mouse_genomes_project 1 52437711 52437820 - Gm23460 snRNA snRNA MGP_LPJ_T0006022.1 MGP_LPJ_G0005047.1 mouse_genomes_project 1 187879722 187889714 - Gm37336 lincRNA lincRNA MGP_LPJ_T0006023.1 MGP_LPJ_G0005047.1 mouse_genomes_project 1 187889311 187889779 - Gm37336 lincRNA lincRNA MGP_LPJ_T0012223.1 MGP_LPJ_G0010314.1 mouse_genomes_project 1 127409248 127410546 - processed_pseudogene processed_pseudogene MGP_LPJ_T0021362.1 MGP_LPJ_G0016254.1 mouse_genomes_project 1 96096080 96102733 - MGP_LPJ_P0021362 Mterf4 protein_coding protein_coding MGP_LPJ_T0021363.1 MGP_LPJ_G0016254.1 mouse_genomes_project 1 96098084 96102785 - MGP_LPJ_P0021363 Mterf4 protein_coding protein_coding MGP_LPJ_T0021364.1 MGP_LPJ_G0016254.1 mouse_genomes_project 1 96098307 96099773 - Mterf4 protein_coding processed_transcript MGP_LPJ_T0021365.1 MGP_LPJ_G0016254.1 mouse_genomes_project 1 96098796 96102734 - MGP_LPJ_P0021365 Mterf4 protein_coding protein_coding MGP_LPJ_T0021366.1 MGP_LPJ_G0016254.1 mouse_genomes_project 1 96100368 96102749 - Mterf4 protein_coding retained_intron MGP_LPJ_T0019045.1 MGP_LPJ_G0015803.1 mouse_genomes_project 1 22209979 22289568 + MGP_LPJ_P0019045 Col9a1 protein_coding protein_coding MGP_LPJ_T0019046.1 MGP_LPJ_G0015803.1 mouse_genomes_project 1 22229837 22289568 + MGP_LPJ_P0019046 Col9a1 protein_coding protein_coding MGP_LPJ_T0019047.1 MGP_LPJ_G0015803.1 mouse_genomes_project 1 22231667 22256724 + Col9a1 protein_coding processed_transcript MGP_LPJ_T0019048.1 MGP_LPJ_G0015803.1 mouse_genomes_project 1 22265455 22266894 + Col9a1 protein_coding processed_transcript MGP_LPJ_T0000570.1 MGP_LPJ_G0000505.1 mouse_genomes_project 1 84135899 84137703 + TEC TEC MGP_LPJ_T0005855.1 MGP_LPJ_G0004911.1 mouse_genomes_project 1 93325807 93330432 + Gm9991 lincRNA lincRNA MGP_LPJ_T0019118.1 MGP_LPJ_G0015818.1 mouse_genomes_project 1 32472316 32525622 - MGP_LPJ_P0019118 Zfp451 protein_coding nonsense_mediated_decay MGP_LPJ_T0019119.1 MGP_LPJ_G0015818.1 mouse_genomes_project 1 32472316 32525764 - MGP_LPJ_P0019119 Zfp451 protein_coding protein_coding MGP_LPJ_T0019120.1 MGP_LPJ_G0015818.1 mouse_genomes_project 1 32488240 32516626 - MGP_LPJ_P0019120 Zfp451 protein_coding protein_coding MGP_LPJ_T0019121.1 MGP_LPJ_G0015818.1 mouse_genomes_project 1 32489748 32494631 - MGP_LPJ_P0019121 Zfp451 protein_coding nonsense_mediated_decay MGP_LPJ_T0019122.1 MGP_LPJ_G0015818.1 mouse_genomes_project 1 32489881 32525663 - MGP_LPJ_P0019122 Zfp451 protein_coding protein_coding MGP_LPJ_T0019123.1 MGP_LPJ_G0015818.1 mouse_genomes_project 1 32492871 32525448 - Zfp451 protein_coding processed_transcript MGP_LPJ_T0019124.1 MGP_LPJ_G0015818.1 mouse_genomes_project 1 32497141 32511995 - Zfp451 protein_coding processed_transcript MGP_LPJ_T0019125.1 MGP_LPJ_G0015818.1 mouse_genomes_project 1 32503387 32525807 - MGP_LPJ_P0019125 Zfp451 protein_coding protein_coding MGP_LPJ_T0019126.1 MGP_LPJ_G0015818.1 mouse_genomes_project 1 32524763 32525832 - Zfp451 protein_coding retained_intron MGP_LPJ_T0023949.1 MGP_LPJ_G0016818.1 mouse_genomes_project 1 191131236 191162462 + MGP_LPJ_P0023949 Aida protein_coding protein_coding MGP_LPJ_T0023950.1 MGP_LPJ_G0016818.1 mouse_genomes_project 1 191131241 191156947 + MGP_LPJ_P0023950 Aida protein_coding unknown_likely_coding MGP_LPJ_T0023951.1 MGP_LPJ_G0016818.1 mouse_genomes_project 1 191131292 191151763 + MGP_LPJ_P0023951 Aida protein_coding nonsense_mediated_decay MGP_LPJ_T0023952.1 MGP_LPJ_G0016818.1 mouse_genomes_project 1 191137570 191156674 + Aida protein_coding retained_intron MGP_LPJ_T0023953.1 MGP_LPJ_G0016818.1 mouse_genomes_project 1 191139369 191152057 + Aida protein_coding retained_intron MGP_LPJ_T0023954.1 MGP_LPJ_G0016818.1 mouse_genomes_project 1 191156474 191159170 + Aida protein_coding retained_intron MGP_LPJ_T0022244.1 MGP_LPJ_G0016447.1 mouse_genomes_project 1 140796110 140801777 + Tnni1 protein_coding processed_transcript MGP_LPJ_T0022245.1 MGP_LPJ_G0016447.1 mouse_genomes_project 1 140799741 140824862 + MGP_LPJ_P0022245 Tnni1 protein_coding protein_coding MGP_LPJ_T0022246.1 MGP_LPJ_G0016447.1 mouse_genomes_project 1 140817585 140830228 + MGP_LPJ_P0022246 Tnni1 protein_coding protein_coding MGP_LPJ_T0022247.1 MGP_LPJ_G0016447.1 mouse_genomes_project 1 140817604 140829873 + Tnni1 protein_coding processed_transcript MGP_LPJ_T0022248.1 MGP_LPJ_G0016447.1 mouse_genomes_project 1 140817604 140830228 + MGP_LPJ_P0022248 Tnni1 protein_coding protein_coding MGP_LPJ_T0022249.1 MGP_LPJ_G0016447.1 mouse_genomes_project 1 140817694 140829939 + MGP_LPJ_P0022249 Tnni1 protein_coding protein_coding MGP_LPJ_T0022250.1 MGP_LPJ_G0016447.1 mouse_genomes_project 1 140817702 140828975 + MGP_LPJ_P0022250 Tnni1 protein_coding protein_coding MGP_LPJ_T0022251.1 MGP_LPJ_G0016447.1 mouse_genomes_project 1 140818016 140830228 + MGP_LPJ_P0022251 Tnni1 protein_coding protein_coding MGP_LPJ_T0022252.1 MGP_LPJ_G0016447.1 mouse_genomes_project 1 140824296 140829149 + MGP_LPJ_P0022252 Tnni1 protein_coding protein_coding MGP_LPJ_T0000775.1 MGP_LPJ_G0000708.1 mouse_genomes_project 1 179340546 179343280 - TEC TEC MGP_LPJ_T0098099.1 MGP_LPJ_G0036380.1 mouse_genomes_project 1 189629836 189629952 - Gm26004 rRNA rRNA MGP_LPJ_T0019732.1 MGP_LPJ_G0015934.1 mouse_genomes_project 1 53291955 53329837 - MGP_LPJ_P0019732 Gm28551 protein_coding nonsense_mediated_decay MGP_LPJ_T0011894.1 MGP_LPJ_G0009985.1 mouse_genomes_project 1 6938253 6940438 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003026.1 MGP_LPJ_G0002834.1 mouse_genomes_project 1 201564932 201566056 - Gm37650 antisense antisense MGP_LPJ_T0005834.1 MGP_LPJ_G0004892.1 mouse_genomes_project 1 85111954 85112911 - Krtap28-10 lincRNA lincRNA MGP_LPJ_T0005776.1 MGP_LPJ_G0004850.1 mouse_genomes_project 1 62574195 62580409 - 4930587A21Rik lincRNA lincRNA MGP_LPJ_T0005764.1 MGP_LPJ_G0004840.1 mouse_genomes_project 1 59270592 59278055 + Gm15834 lincRNA lincRNA MGP_LPJ_T0005765.1 MGP_LPJ_G0004840.1 mouse_genomes_project 1 59270596 59284196 + Gm15834 lincRNA lincRNA MGP_LPJ_T0005766.1 MGP_LPJ_G0004840.1 mouse_genomes_project 1 59270599 59290568 + Gm15834 lincRNA lincRNA MGP_LPJ_T0000476.1 MGP_LPJ_G0000411.1 mouse_genomes_project 1 32961287 32963512 + TEC TEC MGP_LPJ_T0000620.1 MGP_LPJ_G0000555.1 mouse_genomes_project 1 111973511 111975844 + TEC TEC MGP_LPJ_T0012155.1 MGP_LPJ_G0010246.1 mouse_genomes_project 1 103471195 103471510 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012305.1 MGP_LPJ_G0010396.1 mouse_genomes_project 1 167658530 167659727 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023599.1 MGP_LPJ_G0016742.1 mouse_genomes_project 1 181287514 181288461 + MGP_LPJ_P0023599 Olfr424 protein_coding protein_coding MGP_LPJ_T0000804.1 MGP_LPJ_G0000736.1 mouse_genomes_project 1 189746786 189750030 - TEC TEC MGP_LPJ_T0101729.1 MGP_LPJ_G0039767.1 mouse_genomes_project 1 180889666 180892108 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002947.1 MGP_LPJ_G0002773.1 mouse_genomes_project 1 166573111 166754723 + Gm36975 antisense antisense MGP_LPJ_T0012368.1 MGP_LPJ_G0010459.1 mouse_genomes_project 1 199706973 199707438 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000403.1 MGP_LPJ_G0000341.1 mouse_genomes_project 1 6600860 6601912 - TEC TEC MGP_LPJ_T0012056.1 MGP_LPJ_G0010147.1 mouse_genomes_project 1 61475137 61475383 - processed_pseudogene processed_pseudogene MGP_LPJ_T0020469.1 MGP_LPJ_G0016073.1 mouse_genomes_project 1 76319401 76357137 + MGP_LPJ_P0020469 Stk36 protein_coding protein_coding MGP_LPJ_T0020470.1 MGP_LPJ_G0016073.1 mouse_genomes_project 1 76319436 76357134 + Stk36 protein_coding retained_intron MGP_LPJ_T0020471.1 MGP_LPJ_G0016073.1 mouse_genomes_project 1 76319459 76354343 + MGP_LPJ_P0020471 Stk36 protein_coding protein_coding MGP_LPJ_T0020472.1 MGP_LPJ_G0016073.1 mouse_genomes_project 1 76319470 76323486 + MGP_LPJ_P0020472 Stk36 protein_coding protein_coding MGP_LPJ_T0020473.1 MGP_LPJ_G0016073.1 mouse_genomes_project 1 76319595 76356286 + MGP_LPJ_P0020473 Stk36 protein_coding protein_coding MGP_LPJ_T0020474.1 MGP_LPJ_G0016073.1 mouse_genomes_project 1 76321170 76326373 + MGP_LPJ_P0020474 Stk36 protein_coding nonsense_mediated_decay MGP_LPJ_T0020475.1 MGP_LPJ_G0016073.1 mouse_genomes_project 1 76342612 76346172 + Stk36 protein_coding retained_intron MGP_LPJ_T0020476.1 MGP_LPJ_G0016073.1 mouse_genomes_project 1 76343089 76356329 + Stk36 protein_coding processed_transcript MGP_LPJ_T0020477.1 MGP_LPJ_G0016073.1 mouse_genomes_project 1 76346725 76357137 + Stk36 protein_coding retained_intron MGP_LPJ_T0023015.1 MGP_LPJ_G0016589.1 mouse_genomes_project 1 169868154 169886890 - MGP_LPJ_P0023015 Gorab protein_coding protein_coding MGP_LPJ_T0023016.1 MGP_LPJ_G0016589.1 mouse_genomes_project 1 169868158 169886877 - MGP_LPJ_P0023016 Gorab protein_coding nonsense_mediated_decay MGP_LPJ_T0023017.1 MGP_LPJ_G0016589.1 mouse_genomes_project 1 169877636 169886832 - Gorab protein_coding retained_intron MGP_LPJ_T0012065.1 MGP_LPJ_G0010156.1 mouse_genomes_project 1 62164083 62164785 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012143.1 MGP_LPJ_G0010234.1 mouse_genomes_project 1 95788623 95791999 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016935.1 MGP_LPJ_G0015013.1 mouse_genomes_project 1 57657863 57664036 + 9130024F11Rik processed_transcript antisense MGP_LPJ_T0016936.1 MGP_LPJ_G0015013.1 mouse_genomes_project 1 57659051 57661182 + 9130024F11Rik processed_transcript antisense MGP_LPJ_T0016937.1 MGP_LPJ_G0015013.1 mouse_genomes_project 1 57659053 57739694 + 9130024F11Rik processed_transcript antisense MGP_LPJ_T0016938.1 MGP_LPJ_G0015013.1 mouse_genomes_project 1 57659905 57664032 + 9130024F11Rik processed_transcript TEC MGP_LPJ_T0016939.1 MGP_LPJ_G0015013.1 mouse_genomes_project 1 57737571 57747263 + 9130024F11Rik processed_transcript antisense MGP_LPJ_T0021632.1 MGP_LPJ_G0016311.1 mouse_genomes_project 1 122672924 122686678 + Tfcp2l1 protein_coding processed_transcript MGP_LPJ_T0021633.1 MGP_LPJ_G0016311.1 mouse_genomes_project 1 122672925 122743906 + MGP_LPJ_P0021633 Tfcp2l1 protein_coding protein_coding MGP_LPJ_T0011256.1 MGP_LPJ_G0009374.1 mouse_genomes_project 1 27670861 27670973 - Gm25586 misc_RNA misc_RNA MGP_LPJ_T0019790.1 MGP_LPJ_G0015947.1 mouse_genomes_project 1 55678440 55705923 + MGP_LPJ_P0019790 Mob4 protein_coding protein_coding MGP_LPJ_T0019791.1 MGP_LPJ_G0015947.1 mouse_genomes_project 1 55678440 55703643 + MGP_LPJ_P0019791 Mob4 protein_coding protein_coding MGP_LPJ_T0019792.1 MGP_LPJ_G0015947.1 mouse_genomes_project 1 55678469 55705922 + Mob4 protein_coding retained_intron MGP_LPJ_T0019793.1 MGP_LPJ_G0015947.1 mouse_genomes_project 1 55678491 55702704 + MGP_LPJ_P0019793 Mob4 protein_coding protein_coding MGP_LPJ_T0019794.1 MGP_LPJ_G0015947.1 mouse_genomes_project 1 55678496 55703064 + MGP_LPJ_P0019794 Mob4 protein_coding nonsense_mediated_decay MGP_LPJ_T0019795.1 MGP_LPJ_G0015947.1 mouse_genomes_project 1 55678529 55702488 + MGP_LPJ_P0019795 Mob4 protein_coding protein_coding MGP_LPJ_T0019796.1 MGP_LPJ_G0015947.1 mouse_genomes_project 1 55678535 55695102 + Mob4 protein_coding retained_intron MGP_LPJ_T0019797.1 MGP_LPJ_G0015947.1 mouse_genomes_project 1 55697330 55698218 + Mob4 protein_coding retained_intron MGP_LPJ_T0020478.1 MGP_LPJ_G0016074.1 mouse_genomes_project 1 76381153 76423697 + MGP_LPJ_P0020478 Ttll4 protein_coding protein_coding MGP_LPJ_T0020479.1 MGP_LPJ_G0016074.1 mouse_genomes_project 1 76381158 76405346 + MGP_LPJ_P0020479 Ttll4 protein_coding protein_coding MGP_LPJ_T0020480.1 MGP_LPJ_G0016074.1 mouse_genomes_project 1 76381225 76392677 + Ttll4 protein_coding retained_intron MGP_LPJ_T0020481.1 MGP_LPJ_G0016074.1 mouse_genomes_project 1 76381225 76402022 + MGP_LPJ_P0020481 Ttll4 protein_coding protein_coding MGP_LPJ_T0020482.1 MGP_LPJ_G0016074.1 mouse_genomes_project 1 76399128 76417941 + MGP_LPJ_P0020482 Ttll4 protein_coding protein_coding MGP_LPJ_T0020483.1 MGP_LPJ_G0016074.1 mouse_genomes_project 1 76405314 76408617 + Ttll4 protein_coding processed_transcript MGP_LPJ_T0020484.1 MGP_LPJ_G0016074.1 mouse_genomes_project 1 76405944 76408639 + Ttll4 protein_coding processed_transcript MGP_LPJ_T0020485.1 MGP_LPJ_G0016074.1 mouse_genomes_project 1 76409411 76410667 + Ttll4 protein_coding retained_intron MGP_LPJ_T0020486.1 MGP_LPJ_G0016074.1 mouse_genomes_project 1 76410061 76421796 + Ttll4 protein_coding processed_transcript MGP_LPJ_T0020487.1 MGP_LPJ_G0016074.1 mouse_genomes_project 1 76415176 76419842 + Ttll4 protein_coding retained_intron MGP_LPJ_T0020488.1 MGP_LPJ_G0016074.1 mouse_genomes_project 1 76415697 76417805 + Ttll4 protein_coding processed_transcript MGP_LPJ_T0012243.1 MGP_LPJ_G0010334.1 mouse_genomes_project 1 138941721 138942659 - processed_pseudogene processed_pseudogene MGP_LPJ_T0022348.1 MGP_LPJ_G0016465.1 mouse_genomes_project 1 143402679 143418404 + MGP_LPJ_P0022348 Atp6v1g3 protein_coding protein_coding MGP_LPJ_T0023086.1 MGP_LPJ_G0016609.1 mouse_genomes_project 1 171836930 171865622 + MGP_LPJ_P0023086 Gpr161 protein_coding protein_coding MGP_LPJ_T0023087.1 MGP_LPJ_G0016609.1 mouse_genomes_project 1 171843786 171870556 + MGP_LPJ_P0023087 Gpr161 protein_coding protein_coding MGP_LPJ_T0011939.1 MGP_LPJ_G0010030.1 mouse_genomes_project 1 23308908 23309461 + processed_pseudogene processed_pseudogene MGP_LPJ_T0021292.1 MGP_LPJ_G0016238.1 mouse_genomes_project 1 95387361 95388370 + MGP_LPJ_P0021292 Olfr1410 protein_coding protein_coding MGP_LPJ_T0021293.1 MGP_LPJ_G0016238.1 mouse_genomes_project 1 95387361 95388330 + MGP_LPJ_P0021293 Olfr1410 protein_coding protein_coding MGP_LPJ_T0022296.1 MGP_LPJ_G0016456.1 mouse_genomes_project 1 141216774 141242352 - MGP_LPJ_P0022296 Mroh3 protein_coding protein_coding MGP_LPJ_T0022297.1 MGP_LPJ_G0016456.1 mouse_genomes_project 1 141216952 141225992 - MGP_LPJ_P0022297 Mroh3 protein_coding protein_coding MGP_LPJ_T0022298.1 MGP_LPJ_G0016456.1 mouse_genomes_project 1 141216962 141218219 - Mroh3 protein_coding retained_intron MGP_LPJ_T0022299.1 MGP_LPJ_G0016456.1 mouse_genomes_project 1 141217086 141246631 - MGP_LPJ_P0022299 Mroh3 protein_coding unknown_likely_coding MGP_LPJ_T0022300.1 MGP_LPJ_G0016456.1 mouse_genomes_project 1 141226064 141234853 - MGP_LPJ_P0022300 Mroh3 protein_coding protein_coding MGP_LPJ_T0005830.1 MGP_LPJ_G0004889.1 mouse_genomes_project 1 82344916 82348350 + Gm29125 lincRNA lincRNA MGP_LPJ_T0000467.1 MGP_LPJ_G0000403.1 mouse_genomes_project 1 31629709 31634715 - TEC TEC MGP_LPJ_T0012352.1 MGP_LPJ_G0010443.1 mouse_genomes_project 1 189940686 189941470 - processed_pseudogene processed_pseudogene MGP_LPJ_T0021602.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122427599 122651688 + MGP_LPJ_P0021602 Clasp1 protein_coding protein_coding MGP_LPJ_T0021603.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122427599 122651688 + MGP_LPJ_P0021603 Clasp1 protein_coding protein_coding MGP_LPJ_T0021604.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122427599 122651688 + MGP_LPJ_P0021604 Clasp1 protein_coding protein_coding MGP_LPJ_T0021605.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122427599 122651753 + MGP_LPJ_P0021605 Clasp1 protein_coding protein_coding MGP_LPJ_T0021606.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122427885 122543658 + Clasp1 protein_coding retained_intron MGP_LPJ_T0021607.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122428034 122649455 + MGP_LPJ_P0021607 Clasp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0021608.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122428043 122651747 + MGP_LPJ_P0021608 Clasp1 protein_coding protein_coding MGP_LPJ_T0021609.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122428043 122649872 + MGP_LPJ_P0021609 Clasp1 protein_coding protein_coding MGP_LPJ_T0021610.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122428043 122649872 + MGP_LPJ_P0021610 Clasp1 protein_coding protein_coding MGP_LPJ_T0021611.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122428044 122650029 + MGP_LPJ_P0021611 Clasp1 protein_coding protein_coding MGP_LPJ_T0021612.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122428045 122548028 + Clasp1 protein_coding retained_intron MGP_LPJ_T0021613.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122428061 122649455 + MGP_LPJ_P0021613 Clasp1 protein_coding protein_coding MGP_LPJ_T0021614.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122428105 122651496 + MGP_LPJ_P0021614 Clasp1 protein_coding protein_coding MGP_LPJ_T0021615.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122459156 122651756 + MGP_LPJ_P0021615 Clasp1 protein_coding protein_coding MGP_LPJ_T0021616.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122459285 122653234 + MGP_LPJ_P0021616 Clasp1 protein_coding protein_coding MGP_LPJ_T0021617.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122459320 122649402 + MGP_LPJ_P0021617 Clasp1 protein_coding protein_coding MGP_LPJ_T0021618.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122498977 122538225 + Clasp1 protein_coding retained_intron MGP_LPJ_T0021619.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122510034 122649389 + Clasp1 protein_coding processed_transcript MGP_LPJ_T0021620.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122510089 122544342 + Clasp1 protein_coding processed_transcript MGP_LPJ_T0021621.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122510850 122541835 + Clasp1 protein_coding processed_transcript MGP_LPJ_T0021622.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122512035 122545408 + MGP_LPJ_P0021622 Clasp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0021623.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122524093 122649427 + MGP_LPJ_P0021623 Clasp1 protein_coding protein_coding MGP_LPJ_T0021624.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122550689 122570985 + Clasp1 protein_coding retained_intron MGP_LPJ_T0021625.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122553169 122594088 + MGP_LPJ_P0021625 Clasp1 protein_coding protein_coding MGP_LPJ_T0021626.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122577196 122651713 + MGP_LPJ_P0021626 Clasp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0021627.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122579883 122582608 + Clasp1 protein_coding retained_intron MGP_LPJ_T0021628.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122593387 122594107 + Clasp1 protein_coding retained_intron MGP_LPJ_T0021629.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122594153 122628316 + MGP_LPJ_P0021629 Clasp1 protein_coding protein_coding MGP_LPJ_T0021630.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122600995 122604830 + Clasp1 protein_coding retained_intron MGP_LPJ_T0021631.1 MGP_LPJ_G0016310.1 mouse_genomes_project 1 122646998 122651688 + Clasp1 protein_coding retained_intron MGP_LPJ_T0012271.1 MGP_LPJ_G0010362.1 mouse_genomes_project 1 151854103 151854704 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099967.1 MGP_LPJ_G0038230.1 mouse_genomes_project 1 24727309 24727415 + Gm24064 snoRNA snoRNA MGP_LPJ_T0098794.1 MGP_LPJ_G0037057.1 mouse_genomes_project 1 172370255 172370362 - Gm23402 snRNA snRNA MGP_LPJ_T0012144.1 MGP_LPJ_G0010235.1 mouse_genomes_project 1 96103563 96104109 - processed_pseudogene processed_pseudogene MGP_LPJ_T0021923.1 MGP_LPJ_G0016377.1 mouse_genomes_project 1 136496427 136523884 + MGP_LPJ_P0021923 Slc26a9 protein_coding protein_coding MGP_LPJ_T0021924.1 MGP_LPJ_G0016377.1 mouse_genomes_project 1 136496443 136516387 + MGP_LPJ_P0021924 Slc26a9 protein_coding nonsense_mediated_decay MGP_LPJ_T0021925.1 MGP_LPJ_G0016377.1 mouse_genomes_project 1 136502788 136503493 + Slc26a9 protein_coding retained_intron MGP_LPJ_T0021926.1 MGP_LPJ_G0016377.1 mouse_genomes_project 1 136502896 136506389 + MGP_LPJ_P0021926 Slc26a9 protein_coding protein_coding MGP_LPJ_T0020164.1 MGP_LPJ_G0016013.1 mouse_genomes_project 1 65813640 65822099 - MGP_LPJ_P0020164 Fzd5 protein_coding protein_coding MGP_LPJ_T0020165.1 MGP_LPJ_G0016013.1 mouse_genomes_project 1 65817553 65822097 - MGP_LPJ_P0020165 Fzd5 protein_coding protein_coding MGP_LPJ_T0009557.1 MGP_LPJ_G0007675.1 mouse_genomes_project 1 164712212 164712321 + Mir488 miRNA miRNA MGP_LPJ_T0005931.1 MGP_LPJ_G0004974.1 mouse_genomes_project 1 140613000 140698365 - Gm38399 lincRNA lincRNA MGP_LPJ_T0012084.1 MGP_LPJ_G0010175.1 mouse_genomes_project 1 66671384 66672158 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012083.1 MGP_LPJ_G0010174.1 mouse_genomes_project 1 66644708 66645113 - processed_pseudogene processed_pseudogene MGP_LPJ_T0023903.1 MGP_LPJ_G0016807.1 mouse_genomes_project 1 189974118 189975294 - MGP_LPJ_P0023903 Vmn1r1 protein_coding protein_coding MGP_LPJ_T0012074.1 MGP_LPJ_G0010165.1 mouse_genomes_project 1 64406986 64407584 - processed_pseudogene processed_pseudogene MGP_LPJ_T0024182.1 MGP_LPJ_G0016867.1 mouse_genomes_project 1 200258496 200259910 - Traf5 protein_coding retained_intron MGP_LPJ_T0024183.1 MGP_LPJ_G0016867.1 mouse_genomes_project 1 200258496 200261264 - MGP_LPJ_P0024183 Traf5 protein_coding protein_coding MGP_LPJ_T0024184.1 MGP_LPJ_G0016867.1 mouse_genomes_project 1 200258721 200286787 - MGP_LPJ_P0024184 Traf5 protein_coding unknown_likely_coding MGP_LPJ_T0024185.1 MGP_LPJ_G0016867.1 mouse_genomes_project 1 200258721 200309965 - MGP_LPJ_P0024185 Traf5 protein_coding protein_coding MGP_LPJ_T0024186.1 MGP_LPJ_G0016867.1 mouse_genomes_project 1 200268094 200272672 - MGP_LPJ_P0024186 Traf5 protein_coding protein_coding MGP_LPJ_T0024187.1 MGP_LPJ_G0016867.1 mouse_genomes_project 1 200269121 200272672 - Traf5 protein_coding retained_intron MGP_LPJ_T0022628.1 MGP_LPJ_G0016521.1 mouse_genomes_project 1 159846978 159906973 - MGP_LPJ_P0022628 Teddm2 protein_coding protein_coding MGP_LPJ_T0022629.1 MGP_LPJ_G0016521.1 mouse_genomes_project 1 159846978 159848634 - MGP_LPJ_P0022629 Teddm2 protein_coding protein_coding MGP_LPJ_T0022632.1 MGP_LPJ_G0016521.1 mouse_genomes_project 1 159903854 159906993 - Teddm2 protein_coding retained_intron MGP_LPJ_T0022396.1 MGP_LPJ_G0016478.1 mouse_genomes_project 1 145539172 145928532 + MGP_LPJ_P0022396 Kcnt2 protein_coding protein_coding MGP_LPJ_T0022397.1 MGP_LPJ_G0016478.1 mouse_genomes_project 1 145539209 145925998 + MGP_LPJ_P0022397 Kcnt2 protein_coding protein_coding MGP_LPJ_T0022398.1 MGP_LPJ_G0016478.1 mouse_genomes_project 1 145539221 145926295 + MGP_LPJ_P0022398 Kcnt2 protein_coding protein_coding MGP_LPJ_T0022399.1 MGP_LPJ_G0016478.1 mouse_genomes_project 1 145744120 145745132 + Kcnt2 protein_coding retained_intron MGP_LPJ_T0022400.1 MGP_LPJ_G0016478.1 mouse_genomes_project 1 145744285 145831790 + Kcnt2 protein_coding processed_transcript MGP_LPJ_T0022401.1 MGP_LPJ_G0016478.1 mouse_genomes_project 1 145824032 145882994 + MGP_LPJ_P0022401 Kcnt2 protein_coding nonsense_mediated_decay MGP_LPJ_T0101691.1 MGP_LPJ_G0039729.1 mouse_genomes_project 1 89473480 89476451 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0023077.1 MGP_LPJ_G0016607.1 mouse_genomes_project 1 171719989 171740089 - MGP_LPJ_P0023077 Sft2d2 protein_coding protein_coding MGP_LPJ_T0023078.1 MGP_LPJ_G0016607.1 mouse_genomes_project 1 171721523 171739972 - MGP_LPJ_P0023078 Sft2d2 protein_coding nonsense_mediated_decay MGP_LPJ_T0023079.1 MGP_LPJ_G0016607.1 mouse_genomes_project 1 171724890 171739968 - MGP_LPJ_P0023079 Sft2d2 protein_coding nonsense_mediated_decay MGP_LPJ_T0000696.1 MGP_LPJ_G0000629.1 mouse_genomes_project 1 144219564 144222036 + TEC TEC MGP_LPJ_T0022105.1 MGP_LPJ_G0016414.1 mouse_genomes_project 1 138812268 138823379 - MGP_LPJ_P0022105 Prelp protein_coding protein_coding MGP_LPJ_T0022106.1 MGP_LPJ_G0016414.1 mouse_genomes_project 1 138814684 138823376 - Prelp protein_coding processed_transcript MGP_LPJ_T0024117.1 MGP_LPJ_G0016851.1 mouse_genomes_project 1 199192300 199202189 - Mfsd7b protein_coding retained_intron MGP_LPJ_T0024118.1 MGP_LPJ_G0016851.1 mouse_genomes_project 1 199192300 199217931 - MGP_LPJ_P0024118 Mfsd7b protein_coding protein_coding MGP_LPJ_T0024119.1 MGP_LPJ_G0016851.1 mouse_genomes_project 1 199192302 199217740 - MGP_LPJ_P0024119 Mfsd7b protein_coding nonsense_mediated_decay MGP_LPJ_T0024120.1 MGP_LPJ_G0016851.1 mouse_genomes_project 1 199192303 199194909 - Mfsd7b protein_coding retained_intron MGP_LPJ_T0024121.1 MGP_LPJ_G0016851.1 mouse_genomes_project 1 199203257 199205525 - Mfsd7b protein_coding retained_intron MGP_LPJ_T0024122.1 MGP_LPJ_G0016851.1 mouse_genomes_project 1 199216681 199217897 - MGP_LPJ_P0024122 Mfsd7b protein_coding protein_coding MGP_LPJ_T0019020.1 MGP_LPJ_G0015797.1 mouse_genomes_project 1 21064460 21066241 - MGP_LPJ_P0019020 4933415F23Rik protein_coding protein_coding MGP_LPJ_T0100035.1 MGP_LPJ_G0038298.1 mouse_genomes_project 1 167377893 167377959 + Snord78 snoRNA snoRNA MGP_LPJ_T0018699.1 MGP_LPJ_G0015734.1 mouse_genomes_project 1 3156883 3160575 - MGP_LPJ_P0018699 Npbwr1 protein_coding protein_coding MGP_LPJ_T0098776.1 MGP_LPJ_G0037039.1 mouse_genomes_project 1 128870135 128870239 + Gm25578 snRNA snRNA MGP_LPJ_T0012328.1 MGP_LPJ_G0010419.1 mouse_genomes_project 1 177794996 177795332 - processed_pseudogene processed_pseudogene MGP_LPJ_T0020351.1 MGP_LPJ_G0016053.1 mouse_genomes_project 1 74624827 74625663 - MGP_LPJ_P0020351 Tnp1 protein_coding protein_coding MGP_LPJ_T0000430.1 MGP_LPJ_G0000368.1 mouse_genomes_project 1 17457783 17461401 + TEC TEC MGP_LPJ_T0012372.1 MGP_LPJ_G0010463.1 mouse_genomes_project 1 201070389 201070843 - processed_pseudogene processed_pseudogene MGP_LPJ_T0019919.1 MGP_LPJ_G0015971.1 mouse_genomes_project 1 59443367 59720149 - MGP_LPJ_P0019919 protein_coding protein_coding MGP_LPJ_T0019920.1 MGP_LPJ_G0015971.1 mouse_genomes_project 1 59443367 59497790 - MGP_LPJ_P0019920 protein_coding protein_coding MGP_LPJ_T0019921.1 MGP_LPJ_G0015971.1 mouse_genomes_project 1 59443610 59497790 - MGP_LPJ_P0019921 protein_coding nonsense_mediated_decay MGP_LPJ_T0019922.1 MGP_LPJ_G0015971.1 mouse_genomes_project 1 59453144 59721634 - protein_coding retained_intron MGP_LPJ_T0000528.1 MGP_LPJ_G0000463.1 mouse_genomes_project 1 62658876 62660241 + TEC TEC MGP_LPJ_T0000553.1 MGP_LPJ_G0000488.1 mouse_genomes_project 1 76001059 76004139 + TEC TEC MGP_LPJ_T0012264.1 MGP_LPJ_G0010355.1 mouse_genomes_project 1 148527088 148528358 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000748.1 MGP_LPJ_G0000681.1 mouse_genomes_project 1 166931865 166935360 - TEC TEC MGP_LPJ_T0098439.1 MGP_LPJ_G0036720.1 mouse_genomes_project 1 35847113 35850055 - Gm38115 sense_intronic sense_intronic MGP_LPJ_T0020542.1 MGP_LPJ_G0016089.1 mouse_genomes_project 1 76857883 76866557 - MGP_LPJ_P0020542 Abcb6 protein_coding protein_coding MGP_LPJ_T0020543.1 MGP_LPJ_G0016089.1 mouse_genomes_project 1 76857885 76866451 - Abcb6 protein_coding retained_intron MGP_LPJ_T0020544.1 MGP_LPJ_G0016089.1 mouse_genomes_project 1 76857924 76859036 - MGP_LPJ_P0020544 Abcb6 protein_coding protein_coding MGP_LPJ_T0020545.1 MGP_LPJ_G0016089.1 mouse_genomes_project 1 76858886 76866451 - Abcb6 protein_coding retained_intron MGP_LPJ_T0020546.1 MGP_LPJ_G0016089.1 mouse_genomes_project 1 76861717 76865114 - Abcb6 protein_coding retained_intron MGP_LPJ_T0020547.1 MGP_LPJ_G0016089.1 mouse_genomes_project 1 76864074 76866541 - Abcb6 protein_coding retained_intron MGP_LPJ_T0000606.1 MGP_LPJ_G0000541.1 mouse_genomes_project 1 98612467 98614202 - TEC TEC MGP_LPJ_T0022192.1 MGP_LPJ_G0016435.1 mouse_genomes_project 1 140112174 140125169 + MGP_LPJ_P0022192 Ptpn7 protein_coding unknown_likely_coding MGP_LPJ_T0022193.1 MGP_LPJ_G0016435.1 mouse_genomes_project 1 140113580 140121905 + Ptpn7 protein_coding retained_intron MGP_LPJ_T0000807.1 MGP_LPJ_G0000739.1 mouse_genomes_project 1 189803564 189805812 - TEC TEC MGP_LPJ_T0012326.1 MGP_LPJ_G0010417.1 mouse_genomes_project 1 176282765 176283349 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002968.1 MGP_LPJ_G0002789.1 mouse_genomes_project 1 176716352 176719350 + 3110045C21Rik antisense antisense MGP_LPJ_T0002969.1 MGP_LPJ_G0002789.1 mouse_genomes_project 1 176716395 176719324 + 3110045C21Rik antisense antisense MGP_LPJ_T0012183.1 MGP_LPJ_G0010274.1 mouse_genomes_project 1 112579563 112580690 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002823.1 MGP_LPJ_G0002679.1 mouse_genomes_project 1 43085381 43087316 - Gm29155 antisense antisense MGP_LPJ_T0002824.1 MGP_LPJ_G0002679.1 mouse_genomes_project 1 43087004 43087273 - Gm29155 antisense antisense MGP_LPJ_T0000679.1 MGP_LPJ_G0000613.1 mouse_genomes_project 1 142352795 142354711 + TEC TEC MGP_LPJ_T0000567.1 MGP_LPJ_G0000502.1 mouse_genomes_project 1 82710448 82712304 - TEC TEC MGP_LPJ_T0012115.1 MGP_LPJ_G0010206.1 mouse_genomes_project 1 83561494 83564563 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000664.1 MGP_LPJ_G0000599.1 mouse_genomes_project 1 136699006 136699513 - TEC TEC MGP_LPJ_T0002966.1 MGP_LPJ_G0002787.1 mouse_genomes_project 1 172988040 172988695 - Gm15853 antisense antisense MGP_LPJ_T0024046.1 MGP_LPJ_G0016840.1 mouse_genomes_project 1 195604455 196070199 + MGP_LPJ_P0024046 Esrrg protein_coding protein_coding MGP_LPJ_T0024047.1 MGP_LPJ_G0016840.1 mouse_genomes_project 1 195604693 196244568 + MGP_LPJ_P0024047 Esrrg protein_coding protein_coding MGP_LPJ_T0024048.1 MGP_LPJ_G0016840.1 mouse_genomes_project 1 195605359 195799991 + Esrrg protein_coding processed_transcript MGP_LPJ_T0024049.1 MGP_LPJ_G0016840.1 mouse_genomes_project 1 196015432 196245067 + MGP_LPJ_P0024049 Esrrg protein_coding protein_coding MGP_LPJ_T0024050.1 MGP_LPJ_G0016840.1 mouse_genomes_project 1 196015473 196245066 + MGP_LPJ_P0024050 Esrrg protein_coding protein_coding MGP_LPJ_T0000788.1 MGP_LPJ_G0000721.1 mouse_genomes_project 1 184430471 184431772 - TEC TEC MGP_LPJ_T0000621.1 MGP_LPJ_G0000556.1 mouse_genomes_project 1 114604799 114607709 - TEC TEC MGP_LPJ_T0022134.1 MGP_LPJ_G0016423.1 mouse_genomes_project 1 139279412 139294929 - MGP_LPJ_P0022134 Tmem183a protein_coding protein_coding MGP_LPJ_T0022135.1 MGP_LPJ_G0016423.1 mouse_genomes_project 1 139280997 139294891 - MGP_LPJ_P0022135 Tmem183a protein_coding nonsense_mediated_decay MGP_LPJ_T0022136.1 MGP_LPJ_G0016423.1 mouse_genomes_project 1 139281225 139283328 - Tmem183a protein_coding retained_intron MGP_LPJ_T0022137.1 MGP_LPJ_G0016423.1 mouse_genomes_project 1 139288464 139294903 - Tmem183a protein_coding retained_intron MGP_LPJ_T0022138.1 MGP_LPJ_G0016423.1 mouse_genomes_project 1 139288730 139294640 - MGP_LPJ_P0022138 Tmem183a protein_coding protein_coding MGP_LPJ_T0005944.1 MGP_LPJ_G0004984.1 mouse_genomes_project 1 143038212 143079581 - Gm26936 lincRNA lincRNA MGP_LPJ_T0005945.1 MGP_LPJ_G0004984.1 mouse_genomes_project 1 143073883 143079556 - Gm26936 lincRNA lincRNA MGP_LPJ_T0009488.1 MGP_LPJ_G0007606.1 mouse_genomes_project 1 21254174 21254245 + Mir30a miRNA miRNA MGP_LPJ_T0009489.1 MGP_LPJ_G0007607.1 mouse_genomes_project 1 21274859 21274943 + Mir30c-2 miRNA miRNA MGP_LPJ_T0019751.1 MGP_LPJ_G0015940.1 mouse_genomes_project 1 54902013 54939900 - MGP_LPJ_P0019751 Gtf3c3 protein_coding protein_coding MGP_LPJ_T0019752.1 MGP_LPJ_G0015940.1 mouse_genomes_project 1 54921136 54925076 - Gtf3c3 protein_coding retained_intron MGP_LPJ_T0019753.1 MGP_LPJ_G0015940.1 mouse_genomes_project 1 54928325 54929933 - Gtf3c3 protein_coding retained_intron MGP_LPJ_T0000455.1 MGP_LPJ_G0000391.1 mouse_genomes_project 1 23910267 23913864 - TEC TEC MGP_LPJ_T0000715.1 MGP_LPJ_G0000648.1 mouse_genomes_project 1 157226626 157229115 + TEC TEC MGP_LPJ_T0012167.1 MGP_LPJ_G0010258.1 mouse_genomes_project 1 107975533 107976342 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005789.1 MGP_LPJ_G0004859.1 mouse_genomes_project 1 65733446 65736266 + Gm29152 lincRNA lincRNA MGP_LPJ_T0011861.1 MGP_LPJ_G0009952.1 mouse_genomes_project 1 1736328 1739746 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000657.1 MGP_LPJ_G0000592.1 mouse_genomes_project 1 134628599 134631471 + TEC TEC MGP_LPJ_T0000738.1 MGP_LPJ_G0000671.1 mouse_genomes_project 1 164741969 164744575 + TEC TEC MGP_LPJ_T0023739.1 MGP_LPJ_G0016778.1 mouse_genomes_project 1 187343013 187402105 - MGP_LPJ_P0023739 Gm1305 protein_coding protein_coding MGP_LPJ_T0012098.1 MGP_LPJ_G0010189.1 mouse_genomes_project 1 73216618 73216967 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002932.1 MGP_LPJ_G0002760.1 mouse_genomes_project 1 156005299 156026448 - 2310030A07Rik antisense antisense MGP_LPJ_T0022926.1 MGP_LPJ_G0016572.1 mouse_genomes_project 1 168190356 168199136 - MGP_LPJ_P0022926 Fasl protein_coding protein_coding MGP_LPJ_T0022927.1 MGP_LPJ_G0016572.1 mouse_genomes_project 1 168191089 168198999 - MGP_LPJ_P0022927 Fasl protein_coding protein_coding MGP_LPJ_T0018877.1 MGP_LPJ_G0015760.1 mouse_genomes_project 1 11234633 11276019 + MGP_LPJ_P0018877 Xkr9 protein_coding protein_coding MGP_LPJ_T0020501.1 MGP_LPJ_G0016079.1 mouse_genomes_project 1 76586104 76588903 + MGP_LPJ_P0020501 Cdk5r2 protein_coding protein_coding MGP_LPJ_T0098082.1 MGP_LPJ_G0036363.1 mouse_genomes_project 1 75409228 75409354 + Gm25329 rRNA rRNA MGP_LPJ_T0000433.1 MGP_LPJ_G0000371.1 mouse_genomes_project 1 19402411 19404738 - TEC TEC MGP_LPJ_T0021116.1 MGP_LPJ_G0016194.1 mouse_genomes_project 1 90645769 90703609 + MGP_LPJ_P0021116 Ugt1a5 protein_coding protein_coding MGP_LPJ_T0020136.1 MGP_LPJ_G0016006.1 mouse_genomes_project 1 64760839 64792307 - MGP_LPJ_P0020136 Mdh1b protein_coding protein_coding MGP_LPJ_T0022407.1 MGP_LPJ_G0016481.1 mouse_genomes_project 1 149088454 149116288 + Glrx2 protein_coding retained_intron MGP_LPJ_T0022408.1 MGP_LPJ_G0016481.1 mouse_genomes_project 1 149107919 149116290 + MGP_LPJ_P0022408 Glrx2 protein_coding protein_coding MGP_LPJ_T0022409.1 MGP_LPJ_G0016481.1 mouse_genomes_project 1 149108447 149112253 + Glrx2 protein_coding processed_transcript MGP_LPJ_T0022410.1 MGP_LPJ_G0016481.1 mouse_genomes_project 1 149108447 149119821 + MGP_LPJ_P0022410 Glrx2 protein_coding protein_coding MGP_LPJ_T0022411.1 MGP_LPJ_G0016481.1 mouse_genomes_project 1 149108456 149112619 + Glrx2 protein_coding retained_intron MGP_LPJ_T0022412.1 MGP_LPJ_G0016481.1 mouse_genomes_project 1 149108500 149112356 + Glrx2 protein_coding processed_transcript MGP_LPJ_T0022413.1 MGP_LPJ_G0016481.1 mouse_genomes_project 1 149108505 149116290 + MGP_LPJ_P0022413 Glrx2 protein_coding protein_coding MGP_LPJ_T0022414.1 MGP_LPJ_G0016481.1 mouse_genomes_project 1 149108508 149115113 + MGP_LPJ_P0022414 Glrx2 protein_coding protein_coding MGP_LPJ_T0022415.1 MGP_LPJ_G0016481.1 mouse_genomes_project 1 149108536 149116823 + MGP_LPJ_P0022415 Glrx2 protein_coding nonsense_mediated_decay MGP_LPJ_T0022416.1 MGP_LPJ_G0016481.1 mouse_genomes_project 1 149109265 149120122 + MGP_LPJ_P0022416 Glrx2 protein_coding protein_coding MGP_LPJ_T0022417.1 MGP_LPJ_G0016481.1 mouse_genomes_project 1 149112928 149115178 + Glrx2 protein_coding retained_intron MGP_LPJ_T0022418.1 MGP_LPJ_G0016481.1 mouse_genomes_project 1 149114496 149116200 + Glrx2 protein_coding retained_intron MGP_LPJ_T0022419.1 MGP_LPJ_G0016481.1 mouse_genomes_project 1 149115484 149116289 + Glrx2 protein_coding processed_transcript MGP_LPJ_T0016955.1 MGP_LPJ_G0015021.1 mouse_genomes_project 1 92250360 92285145 - 4933400F21Rik processed_transcript antisense MGP_LPJ_T0016956.1 MGP_LPJ_G0015021.1 mouse_genomes_project 1 92278688 92285131 - 4933400F21Rik processed_transcript antisense MGP_LPJ_T0016957.1 MGP_LPJ_G0015021.1 mouse_genomes_project 1 92282286 92285125 - 4933400F21Rik processed_transcript retained_intron MGP_LPJ_T0011923.1 MGP_LPJ_G0010014.1 mouse_genomes_project 1 18281505 18282058 - processed_pseudogene processed_pseudogene MGP_LPJ_T0019874.1 MGP_LPJ_G0015965.1 mouse_genomes_project 1 59170099 59183982 - Clk1 protein_coding retained_intron MGP_LPJ_T0019875.1 MGP_LPJ_G0015965.1 mouse_genomes_project 1 59171910 59172772 - Clk1 protein_coding processed_transcript MGP_LPJ_T0019876.1 MGP_LPJ_G0015965.1 mouse_genomes_project 1 59171910 59173348 - Clk1 protein_coding processed_transcript MGP_LPJ_T0019877.1 MGP_LPJ_G0015965.1 mouse_genomes_project 1 59171910 59176684 - Clk1 protein_coding retained_intron MGP_LPJ_T0019878.1 MGP_LPJ_G0015965.1 mouse_genomes_project 1 59171910 59183982 - MGP_LPJ_P0019878 Clk1 protein_coding protein_coding MGP_LPJ_T0019879.1 MGP_LPJ_G0015965.1 mouse_genomes_project 1 59171910 59183982 - MGP_LPJ_P0019879 Clk1 protein_coding nonsense_mediated_decay MGP_LPJ_T0019880.1 MGP_LPJ_G0015965.1 mouse_genomes_project 1 59171910 59183982 - MGP_LPJ_P0019880 Clk1 protein_coding nonsense_mediated_decay MGP_LPJ_T0019881.1 MGP_LPJ_G0015965.1 mouse_genomes_project 1 59172226 59173736 - Clk1 protein_coding processed_transcript MGP_LPJ_T0019882.1 MGP_LPJ_G0015965.1 mouse_genomes_project 1 59174500 59180302 - Clk1 protein_coding retained_intron MGP_LPJ_T0019883.1 MGP_LPJ_G0015965.1 mouse_genomes_project 1 59174525 59181163 - Clk1 protein_coding retained_intron MGP_LPJ_T0019884.1 MGP_LPJ_G0015965.1 mouse_genomes_project 1 59176060 59183982 - Clk1 protein_coding retained_intron MGP_LPJ_T0019885.1 MGP_LPJ_G0015965.1 mouse_genomes_project 1 59176828 59177345 - Clk1 protein_coding retained_intron MGP_LPJ_T0019886.1 MGP_LPJ_G0015965.1 mouse_genomes_project 1 59181528 59183982 - Clk1 protein_coding retained_intron MGP_LPJ_T0098763.1 MGP_LPJ_G0037026.1 mouse_genomes_project 1 89840847 89840942 - Gm23504 snRNA snRNA MGP_LPJ_T0012329.1 MGP_LPJ_G0010420.1 mouse_genomes_project 1 177809256 177809551 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098782.1 MGP_LPJ_G0037045.1 mouse_genomes_project 1 139207137 139207244 - Gm24517 snRNA snRNA MGP_LPJ_T0006058.1 MGP_LPJ_G0005071.1 mouse_genomes_project 1 192956930 192964441 + Gm37662 lincRNA lincRNA MGP_LPJ_T0019189.1 MGP_LPJ_G0015830.1 mouse_genomes_project 1 33637562 33667973 + MGP_LPJ_P0019189 Plekhb2 protein_coding protein_coding MGP_LPJ_T0019190.1 MGP_LPJ_G0015830.1 mouse_genomes_project 1 33637578 33673565 + MGP_LPJ_P0019190 Plekhb2 protein_coding protein_coding MGP_LPJ_T0019191.1 MGP_LPJ_G0015830.1 mouse_genomes_project 1 33642807 33655114 + MGP_LPJ_P0019191 Plekhb2 protein_coding protein_coding MGP_LPJ_T0019192.1 MGP_LPJ_G0015830.1 mouse_genomes_project 1 33671640 33673562 + Plekhb2 protein_coding processed_transcript MGP_LPJ_T0000658.1 MGP_LPJ_G0000593.1 mouse_genomes_project 1 135173376 135175629 + TEC TEC MGP_LPJ_T0005956.1 MGP_LPJ_G0004993.1 mouse_genomes_project 1 155804528 155810450 - Ptgs2os2 lincRNA lincRNA MGP_LPJ_T0098462.1 MGP_LPJ_G0036742.1 mouse_genomes_project 1 166634542 166642668 - Gm37529 sense_intronic sense_intronic MGP_LPJ_T0022757.1 MGP_LPJ_G0016545.1 mouse_genomes_project 1 162779036 162820371 - MGP_LPJ_P0022757 Fam20b protein_coding protein_coding MGP_LPJ_T0022758.1 MGP_LPJ_G0016545.1 mouse_genomes_project 1 162779075 162820385 - MGP_LPJ_P0022758 Fam20b protein_coding protein_coding MGP_LPJ_T0022759.1 MGP_LPJ_G0016545.1 mouse_genomes_project 1 162786572 162799201 - Fam20b protein_coding retained_intron MGP_LPJ_T0022760.1 MGP_LPJ_G0016545.1 mouse_genomes_project 1 162799046 162804111 - Fam20b protein_coding processed_transcript MGP_LPJ_T0022761.1 MGP_LPJ_G0016545.1 mouse_genomes_project 1 162801956 162818259 - Fam20b protein_coding retained_intron MGP_LPJ_T0019357.1 MGP_LPJ_G0015858.1 mouse_genomes_project 1 36887240 36896331 + MGP_LPJ_P0019357 Mrpl30 protein_coding protein_coding MGP_LPJ_T0019358.1 MGP_LPJ_G0015858.1 mouse_genomes_project 1 36887295 36896160 + MGP_LPJ_P0019358 Mrpl30 protein_coding protein_coding MGP_LPJ_T0019359.1 MGP_LPJ_G0015858.1 mouse_genomes_project 1 36887296 36890010 + Mrpl30 protein_coding retained_intron MGP_LPJ_T0019360.1 MGP_LPJ_G0015858.1 mouse_genomes_project 1 36887306 36890748 + MGP_LPJ_P0019360 Mrpl30 protein_coding protein_coding MGP_LPJ_T0019361.1 MGP_LPJ_G0015858.1 mouse_genomes_project 1 36889696 36895961 + MGP_LPJ_P0019361 Mrpl30 protein_coding protein_coding MGP_LPJ_T0019362.1 MGP_LPJ_G0015858.1 mouse_genomes_project 1 36890698 36896134 + MGP_LPJ_P0019362 Mrpl30 protein_coding protein_coding MGP_LPJ_T0019363.1 MGP_LPJ_G0015858.1 mouse_genomes_project 1 36895051 36895921 + Mrpl30 protein_coding retained_intron MGP_LPJ_T0023413.1 MGP_LPJ_G0016679.1 mouse_genomes_project 1 178330889 178331384 + Tstd1 protein_coding processed_transcript MGP_LPJ_T0023414.1 MGP_LPJ_G0016679.1 mouse_genomes_project 1 178331050 178332370 + MGP_LPJ_P0023414 Tstd1 protein_coding protein_coding MGP_LPJ_T0023415.1 MGP_LPJ_G0016679.1 mouse_genomes_project 1 178331736 178332369 + Tstd1 protein_coding retained_intron MGP_LPJ_T0056099.1 MGP_LPJ_G0026105.1 mouse_genomes_project 2 94009264 94010330 + 1700029I15Rik protein_coding retained_intron MGP_LPJ_T0056100.1 MGP_LPJ_G0026105.1 mouse_genomes_project 2 94009644 94010330 + MGP_LPJ_P0056100 1700029I15Rik protein_coding protein_coding MGP_LPJ_T0056101.1 MGP_LPJ_G0026105.1 mouse_genomes_project 2 94009644 94012435 + MGP_LPJ_P0056101 1700029I15Rik protein_coding protein_coding MGP_LPJ_T0056102.1 MGP_LPJ_G0026105.1 mouse_genomes_project 2 94009644 94010316 + MGP_LPJ_P0056102 1700029I15Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0052349.1 MGP_LPJ_G0025265.1 mouse_genomes_project 2 7093471 7099955 - 9230102O04Rik protein_coding processed_transcript MGP_LPJ_T0052350.1 MGP_LPJ_G0025265.1 mouse_genomes_project 2 7093472 7094424 - MGP_LPJ_P0052350 9230102O04Rik protein_coding protein_coding MGP_LPJ_T0055651.1 MGP_LPJ_G0025934.1 mouse_genomes_project 2 88091101 88092040 - MGP_LPJ_P0055651 Olfr1109 protein_coding protein_coding MGP_LPJ_T0011523.1 MGP_LPJ_G0009641.1 mouse_genomes_project 2 107385989 107386259 - Gm27308 misc_RNA misc_RNA MGP_LPJ_T0017826.1 MGP_LPJ_G0015391.1 mouse_genomes_project 2 150007368 150059801 + BC039771 processed_transcript processed_transcript MGP_LPJ_T0017827.1 MGP_LPJ_G0015391.1 mouse_genomes_project 2 150040939 150101852 + BC039771 processed_transcript processed_transcript MGP_LPJ_T0100603.1 MGP_LPJ_G0038866.1 mouse_genomes_project 2 106400026 106400153 - Gm22501 snoRNA snoRNA MGP_LPJ_T0007188.1 MGP_LPJ_G0005897.1 mouse_genomes_project 2 32405722 32412048 - Gm13403 lincRNA lincRNA MGP_LPJ_T0007189.1 MGP_LPJ_G0005897.1 mouse_genomes_project 2 32407829 32412080 - Gm13403 lincRNA lincRNA MGP_LPJ_T0004156.1 MGP_LPJ_G0003677.1 mouse_genomes_project 2 161340150 161347178 - Gm14252 antisense antisense MGP_LPJ_T0100598.1 MGP_LPJ_G0038861.1 mouse_genomes_project 2 96368727 96368858 + Gm24318 snoRNA snoRNA MGP_LPJ_T0007134.1 MGP_LPJ_G0005856.1 mouse_genomes_project 2 865418 885235 + Gm13180 lincRNA lincRNA MGP_LPJ_T0010509.1 MGP_LPJ_G0008627.1 mouse_genomes_project 2 186686754 186686823 - Mir7005 miRNA miRNA MGP_LPJ_T0098023.1 MGP_LPJ_G0036304.1 mouse_genomes_project 2 20563659 20564075 - pseudogene pseudogene MGP_LPJ_T0013826.1 MGP_LPJ_G0011917.1 mouse_genomes_project 2 173285073 173285350 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013687.1 MGP_LPJ_G0011778.1 mouse_genomes_project 2 114571448 114573201 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099359.1 MGP_LPJ_G0037622.1 mouse_genomes_project 2 139956319 139956420 - Gm26227 snRNA snRNA MGP_LPJ_T0058888.1 MGP_LPJ_G0026755.1 mouse_genomes_project 2 168806920 168873894 - MGP_LPJ_P0058888 Jph2 protein_coding protein_coding MGP_LPJ_T0058889.1 MGP_LPJ_G0026755.1 mouse_genomes_project 2 168806920 168873938 - MGP_LPJ_P0058889 Jph2 protein_coding protein_coding MGP_LPJ_T0055419.1 MGP_LPJ_G0025820.1 mouse_genomes_project 2 81099085 81121144 + MGP_LPJ_P0055419 Nup35 protein_coding protein_coding MGP_LPJ_T0007261.1 MGP_LPJ_G0005957.1 mouse_genomes_project 2 78577496 78647669 + Gm14461 lincRNA lincRNA MGP_LPJ_T0007262.1 MGP_LPJ_G0005957.1 mouse_genomes_project 2 78647130 78647439 + Gm14461 lincRNA lincRNA MGP_LPJ_T0053178.1 MGP_LPJ_G0025415.1 mouse_genomes_project 2 24246904 24254557 - MGP_LPJ_P0053178 Card9 protein_coding protein_coding MGP_LPJ_T0053179.1 MGP_LPJ_G0025415.1 mouse_genomes_project 2 24246915 24247516 - Card9 protein_coding processed_transcript MGP_LPJ_T0053180.1 MGP_LPJ_G0025415.1 mouse_genomes_project 2 24246915 24255728 - MGP_LPJ_P0053180 Card9 protein_coding protein_coding MGP_LPJ_T0052402.1 MGP_LPJ_G0025274.1 mouse_genomes_project 2 8914007 8934074 - MGP_LPJ_P0052402 Rbm17 protein_coding protein_coding MGP_LPJ_T0052403.1 MGP_LPJ_G0025274.1 mouse_genomes_project 2 8914009 8914561 - Rbm17 protein_coding retained_intron MGP_LPJ_T0052404.1 MGP_LPJ_G0025274.1 mouse_genomes_project 2 8914011 8915739 - Rbm17 protein_coding retained_intron MGP_LPJ_T0052405.1 MGP_LPJ_G0025274.1 mouse_genomes_project 2 8915961 8917552 - Rbm17 protein_coding retained_intron MGP_LPJ_T0052406.1 MGP_LPJ_G0025274.1 mouse_genomes_project 2 8917485 8919429 - Rbm17 protein_coding retained_intron MGP_LPJ_T0052407.1 MGP_LPJ_G0025274.1 mouse_genomes_project 2 8927493 8934963 - MGP_LPJ_P0052407 Rbm17 protein_coding protein_coding MGP_LPJ_T0057374.1 MGP_LPJ_G0026400.1 mouse_genomes_project 2 131061727 131076680 - MGP_LPJ_P0057374 Prom2 protein_coding protein_coding MGP_LPJ_T0057375.1 MGP_LPJ_G0026400.1 mouse_genomes_project 2 131062209 131076598 - MGP_LPJ_P0057375 Prom2 protein_coding protein_coding MGP_LPJ_T0057376.1 MGP_LPJ_G0026400.1 mouse_genomes_project 2 131069978 131070410 - Prom2 protein_coding processed_transcript MGP_LPJ_T0057377.1 MGP_LPJ_G0026400.1 mouse_genomes_project 2 131075451 131076627 - Prom2 protein_coding retained_intron MGP_LPJ_T0057678.1 MGP_LPJ_G0026471.1 mouse_genomes_project 2 135625988 135632125 - MGP_LPJ_P0057678 Erv3 protein_coding protein_coding MGP_LPJ_T0055703.1 MGP_LPJ_G0025976.1 mouse_genomes_project 2 89130973 89132305 - MGP_LPJ_P0055703 protein_coding protein_coding MGP_LPJ_T0056513.1 MGP_LPJ_G0026200.1 mouse_genomes_project 2 113968868 113969815 + MGP_LPJ_P0056513 protein_coding protein_coding MGP_LPJ_T0056477.1 MGP_LPJ_G0026181.1 mouse_genomes_project 2 112457002 112557052 + MGP_LPJ_P0056477 Lgr4 protein_coding protein_coding MGP_LPJ_T0056478.1 MGP_LPJ_G0026181.1 mouse_genomes_project 2 112457002 112557052 + MGP_LPJ_P0056478 Lgr4 protein_coding protein_coding MGP_LPJ_T0056479.1 MGP_LPJ_G0026181.1 mouse_genomes_project 2 112517416 112539513 + Lgr4 protein_coding processed_transcript MGP_LPJ_T0056480.1 MGP_LPJ_G0026181.1 mouse_genomes_project 2 112543330 112544263 + Lgr4 protein_coding retained_intron MGP_LPJ_T0098027.1 MGP_LPJ_G0036308.1 mouse_genomes_project 2 95672521 95673270 - pseudogene pseudogene MGP_LPJ_T0100596.1 MGP_LPJ_G0038859.1 mouse_genomes_project 2 85955761 85955905 + Gm23716 snoRNA snoRNA MGP_LPJ_T0056969.1 MGP_LPJ_G0026313.1 mouse_genomes_project 2 124146088 124152784 + MGP_LPJ_P0056969 Ccndbp1 protein_coding protein_coding MGP_LPJ_T0056970.1 MGP_LPJ_G0026313.1 mouse_genomes_project 2 124146123 124150600 + Ccndbp1 protein_coding processed_transcript MGP_LPJ_T0056971.1 MGP_LPJ_G0026313.1 mouse_genomes_project 2 124146128 124154161 + MGP_LPJ_P0056971 Ccndbp1 protein_coding protein_coding MGP_LPJ_T0056972.1 MGP_LPJ_G0026313.1 mouse_genomes_project 2 124146166 124154545 + MGP_LPJ_P0056972 Ccndbp1 protein_coding protein_coding MGP_LPJ_T0056973.1 MGP_LPJ_G0026313.1 mouse_genomes_project 2 124146360 124148231 + Ccndbp1 protein_coding retained_intron MGP_LPJ_T0056974.1 MGP_LPJ_G0026313.1 mouse_genomes_project 2 124148706 124149408 + Ccndbp1 protein_coding retained_intron MGP_LPJ_T0056975.1 MGP_LPJ_G0026313.1 mouse_genomes_project 2 124150142 124150612 + Ccndbp1 protein_coding processed_transcript MGP_LPJ_T0054272.1 MGP_LPJ_G0025583.1 mouse_genomes_project 2 33872209 33895198 - MGP_LPJ_P0054272 Stom protein_coding protein_coding MGP_LPJ_T0054273.1 MGP_LPJ_G0025583.1 mouse_genomes_project 2 33873562 33878727 - Stom protein_coding retained_intron MGP_LPJ_T0052698.1 MGP_LPJ_G0025324.1 mouse_genomes_project 2 20563860 20583641 + Pdss1 protein_coding processed_transcript MGP_LPJ_T0052699.1 MGP_LPJ_G0025324.1 mouse_genomes_project 2 20563860 20610339 + MGP_LPJ_P0052699 Pdss1 protein_coding protein_coding MGP_LPJ_T0052700.1 MGP_LPJ_G0025324.1 mouse_genomes_project 2 20563933 20587155 + MGP_LPJ_P0052700 Pdss1 protein_coding protein_coding MGP_LPJ_T0052701.1 MGP_LPJ_G0025324.1 mouse_genomes_project 2 20563957 20570880 + MGP_LPJ_P0052701 Pdss1 protein_coding nonsense_mediated_decay MGP_LPJ_T0052702.1 MGP_LPJ_G0025324.1 mouse_genomes_project 2 20564386 20577766 + MGP_LPJ_P0052702 Pdss1 protein_coding protein_coding MGP_LPJ_T0052703.1 MGP_LPJ_G0025324.1 mouse_genomes_project 2 20604192 20610328 + Pdss1 protein_coding retained_intron MGP_LPJ_T0052704.1 MGP_LPJ_G0025324.1 mouse_genomes_project 2 20605628 20610315 + MGP_LPJ_P0052704 Pdss1 protein_coding nonsense_mediated_decay MGP_LPJ_T0013478.1 MGP_LPJ_G0011569.1 mouse_genomes_project 2 39684632 39685596 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004011.1 MGP_LPJ_G0003577.1 mouse_genomes_project 2 70394081 70399808 - Erich2os antisense antisense MGP_LPJ_T0004030.1 MGP_LPJ_G0003590.1 mouse_genomes_project 2 74881554 74890260 - Hoxd3os1 antisense antisense MGP_LPJ_T0004031.1 MGP_LPJ_G0003590.1 mouse_genomes_project 2 74888317 74890732 - Hoxd3os1 antisense antisense MGP_LPJ_T0004032.1 MGP_LPJ_G0003590.1 mouse_genomes_project 2 74888467 74894199 - Hoxd3os1 antisense antisense MGP_LPJ_T0004033.1 MGP_LPJ_G0003590.1 mouse_genomes_project 2 74891331 74894333 - Hoxd3os1 antisense antisense MGP_LPJ_T0058928.1 MGP_LPJ_G0026765.1 mouse_genomes_project 2 169301747 169309881 + Wisp2 protein_coding processed_transcript MGP_LPJ_T0058929.1 MGP_LPJ_G0026765.1 mouse_genomes_project 2 169301775 169314009 + MGP_LPJ_P0058929 Wisp2 protein_coding protein_coding MGP_LPJ_T0007430.1 MGP_LPJ_G0006095.1 mouse_genomes_project 2 175424420 175449457 + Gm14249 lincRNA lincRNA MGP_LPJ_T0053220.1 MGP_LPJ_G0025420.1 mouse_genomes_project 2 24303643 24343186 - MGP_LPJ_P0053220 Sec16a protein_coding protein_coding MGP_LPJ_T0053221.1 MGP_LPJ_G0025420.1 mouse_genomes_project 2 24303643 24325586 - MGP_LPJ_P0053221 Sec16a protein_coding protein_coding MGP_LPJ_T0053222.1 MGP_LPJ_G0025420.1 mouse_genomes_project 2 24303645 24343188 - MGP_LPJ_P0053222 Sec16a protein_coding protein_coding MGP_LPJ_T0053223.1 MGP_LPJ_G0025420.1 mouse_genomes_project 2 24304501 24307583 - Sec16a protein_coding processed_transcript MGP_LPJ_T0053224.1 MGP_LPJ_G0025420.1 mouse_genomes_project 2 24304931 24311996 - Sec16a protein_coding processed_transcript MGP_LPJ_T0053225.1 MGP_LPJ_G0025420.1 mouse_genomes_project 2 24310144 24315893 - Sec16a protein_coding processed_transcript MGP_LPJ_T0053226.1 MGP_LPJ_G0025420.1 mouse_genomes_project 2 24332672 24337727 - MGP_LPJ_P0053226 Sec16a protein_coding protein_coding MGP_LPJ_T0053227.1 MGP_LPJ_G0025420.1 mouse_genomes_project 2 24339935 24343172 - Sec16a protein_coding processed_transcript MGP_LPJ_T0059043.1 MGP_LPJ_G0026812.1 mouse_genomes_project 2 170389058 170391198 - Spata25 protein_coding processed_transcript MGP_LPJ_T0059044.1 MGP_LPJ_G0026812.1 mouse_genomes_project 2 170390051 170391207 - MGP_LPJ_P0059044 Spata25 protein_coding protein_coding MGP_LPJ_T0017745.1 MGP_LPJ_G0015355.1 mouse_genomes_project 2 90044794 90048876 - Gm13760 processed_transcript processed_transcript MGP_LPJ_T0017746.1 MGP_LPJ_G0015355.1 mouse_genomes_project 2 90045104 90049348 - Gm13760 processed_transcript processed_transcript MGP_LPJ_T0055677.1 MGP_LPJ_G0025952.1 mouse_genomes_project 2 88629844 88631146 - MGP_LPJ_P0055677 protein_coding protein_coding MGP_LPJ_T0100560.1 MGP_LPJ_G0038823.1 mouse_genomes_project 2 8304414 8304543 - Gm23877 snoRNA snoRNA MGP_LPJ_T0056956.1 MGP_LPJ_G0026311.1 mouse_genomes_project 2 123989676 124105375 - MGP_LPJ_P0056956 Ubr1 protein_coding protein_coding MGP_LPJ_T0056957.1 MGP_LPJ_G0026311.1 mouse_genomes_project 2 123991981 124001643 - Ubr1 protein_coding processed_transcript MGP_LPJ_T0056958.1 MGP_LPJ_G0026311.1 mouse_genomes_project 2 124003166 124021836 - Ubr1 protein_coding processed_transcript MGP_LPJ_T0056959.1 MGP_LPJ_G0026311.1 mouse_genomes_project 2 124033600 124046314 - Ubr1 protein_coding processed_transcript MGP_LPJ_T0056960.1 MGP_LPJ_G0026311.1 mouse_genomes_project 2 124053655 124062264 - Ubr1 protein_coding processed_transcript MGP_LPJ_T0056961.1 MGP_LPJ_G0026311.1 mouse_genomes_project 2 124078367 124105273 - Ubr1 protein_coding retained_intron MGP_LPJ_T0056962.1 MGP_LPJ_G0026311.1 mouse_genomes_project 2 124096814 124105352 - Ubr1 protein_coding retained_intron MGP_LPJ_T0004021.1 MGP_LPJ_G0003583.1 mouse_genomes_project 2 73519421 73527802 + Gm13709 antisense antisense MGP_LPJ_T0052428.1 MGP_LPJ_G0025278.1 mouse_genomes_project 2 9085566 9086645 - Fbxo18 protein_coding processed_transcript MGP_LPJ_T0052429.1 MGP_LPJ_G0025278.1 mouse_genomes_project 2 9085568 9123988 - MGP_LPJ_P0052429 Fbxo18 protein_coding protein_coding MGP_LPJ_T0052430.1 MGP_LPJ_G0025278.1 mouse_genomes_project 2 9086660 9091900 - Fbxo18 protein_coding retained_intron MGP_LPJ_T0052431.1 MGP_LPJ_G0025278.1 mouse_genomes_project 2 9090520 9123913 - Fbxo18 protein_coding retained_intron MGP_LPJ_T0052432.1 MGP_LPJ_G0025278.1 mouse_genomes_project 2 9091107 9098948 - MGP_LPJ_P0052432 Fbxo18 protein_coding protein_coding MGP_LPJ_T0052433.1 MGP_LPJ_G0025278.1 mouse_genomes_project 2 9092125 9094437 - Fbxo18 protein_coding retained_intron MGP_LPJ_T0052434.1 MGP_LPJ_G0025278.1 mouse_genomes_project 2 9094346 9099865 - Fbxo18 protein_coding retained_intron MGP_LPJ_T0052435.1 MGP_LPJ_G0025278.1 mouse_genomes_project 2 9104323 9123956 - Fbxo18 protein_coding processed_transcript MGP_LPJ_T0052436.1 MGP_LPJ_G0025278.1 mouse_genomes_project 2 9105616 9123954 - Fbxo18 protein_coding processed_transcript MGP_LPJ_T0052437.1 MGP_LPJ_G0025278.1 mouse_genomes_project 2 9108886 9123913 - Fbxo18 protein_coding processed_transcript MGP_LPJ_T0059002.1 MGP_LPJ_G0026794.1 mouse_genomes_project 2 170137881 170143135 - MGP_LPJ_P0059002 Eppin protein_coding protein_coding MGP_LPJ_T0054592.1 MGP_LPJ_G0025659.1 mouse_genomes_project 2 50796489 50797387 + MGP_LPJ_P0054592 Tas2r134 protein_coding protein_coding MGP_LPJ_T0053556.1 MGP_LPJ_G0025479.1 mouse_genomes_project 2 28033836 28064606 + MGP_LPJ_P0053556 Gle1 protein_coding protein_coding MGP_LPJ_T0053557.1 MGP_LPJ_G0025479.1 mouse_genomes_project 2 28033838 28038738 + Gle1 protein_coding retained_intron MGP_LPJ_T0053558.1 MGP_LPJ_G0025479.1 mouse_genomes_project 2 28033933 28039278 + Gle1 protein_coding retained_intron MGP_LPJ_T0053559.1 MGP_LPJ_G0025479.1 mouse_genomes_project 2 28043133 28044559 + Gle1 protein_coding retained_intron MGP_LPJ_T0053560.1 MGP_LPJ_G0025479.1 mouse_genomes_project 2 28043496 28045536 + Gle1 protein_coding retained_intron MGP_LPJ_T0053561.1 MGP_LPJ_G0025479.1 mouse_genomes_project 2 28049821 28051443 + Gle1 protein_coding retained_intron MGP_LPJ_T0053562.1 MGP_LPJ_G0025479.1 mouse_genomes_project 2 28059746 28062452 + Gle1 protein_coding retained_intron MGP_LPJ_T0003938.1 MGP_LPJ_G0003521.1 mouse_genomes_project 2 24275823 24281556 + Gm13563 antisense antisense MGP_LPJ_T0003939.1 MGP_LPJ_G0003521.1 mouse_genomes_project 2 24279849 24282092 + Gm13563 antisense antisense MGP_LPJ_T0003940.1 MGP_LPJ_G0003521.1 mouse_genomes_project 2 24281754 24283316 + Gm13563 antisense antisense MGP_LPJ_T0058072.1 MGP_LPJ_G0026572.1 mouse_genomes_project 2 155629256 155639050 - MGP_LPJ_P0058072 Gm6741 protein_coding protein_coding MGP_LPJ_T0058074.1 MGP_LPJ_G0026572.1 mouse_genomes_project 2 155630328 155639014 - Gm6741 protein_coding processed_transcript MGP_LPJ_T0007302.1 MGP_LPJ_G0005990.1 mouse_genomes_project 2 110643042 110755573 - Gm13912 lincRNA lincRNA MGP_LPJ_T0059453.1 MGP_LPJ_G0026899.1 mouse_genomes_project 2 180586775 180606521 - MGP_LPJ_P0059453 Gm20721 protein_coding protein_coding MGP_LPJ_T0007154.1 MGP_LPJ_G0005872.1 mouse_genomes_project 2 8655331 8659955 + Gm13293 lincRNA lincRNA MGP_LPJ_T0054589.1 MGP_LPJ_G0025658.1 mouse_genomes_project 2 50300815 50321325 - MGP_LPJ_P0054589 Rnd3 protein_coding protein_coding MGP_LPJ_T0054590.1 MGP_LPJ_G0025658.1 mouse_genomes_project 2 50302212 50321323 - MGP_LPJ_P0054590 Rnd3 protein_coding protein_coding MGP_LPJ_T0054591.1 MGP_LPJ_G0025658.1 mouse_genomes_project 2 50307446 50321307 - Rnd3 protein_coding retained_intron MGP_LPJ_T0007357.1 MGP_LPJ_G0006035.1 mouse_genomes_project 2 148405304 148422093 - lincRNA lincRNA MGP_LPJ_T0007358.1 MGP_LPJ_G0006035.1 mouse_genomes_project 2 148406486 148411850 - lincRNA lincRNA MGP_LPJ_T0010353.1 MGP_LPJ_G0008471.1 mouse_genomes_project 2 7725481 7725575 + Mir466f-1 miRNA miRNA MGP_LPJ_T0059136.1 MGP_LPJ_G0026826.1 mouse_genomes_project 2 170953853 170973285 - MGP_LPJ_P0059136 Zfp663 protein_coding protein_coding MGP_LPJ_T0059137.1 MGP_LPJ_G0026826.1 mouse_genomes_project 2 170953854 170964153 - MGP_LPJ_P0059137 Zfp663 protein_coding protein_coding MGP_LPJ_T0059138.1 MGP_LPJ_G0026826.1 mouse_genomes_project 2 170956367 170963422 - Zfp663 protein_coding processed_transcript MGP_LPJ_T0059139.1 MGP_LPJ_G0026826.1 mouse_genomes_project 2 170956600 170973279 - MGP_LPJ_P0059139 Zfp663 protein_coding protein_coding MGP_LPJ_T0013427.1 MGP_LPJ_G0011518.1 mouse_genomes_project 2 21226202 21226650 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007136.1 MGP_LPJ_G0005858.1 mouse_genomes_project 2 1153741 1160843 + Gm13189 lincRNA lincRNA MGP_LPJ_T0013813.1 MGP_LPJ_G0011904.1 mouse_genomes_project 2 166821076 166822602 - processed_pseudogene processed_pseudogene MGP_LPJ_T0059552.1 MGP_LPJ_G0026925.1 mouse_genomes_project 2 186847079 186856691 - MGP_LPJ_P0059552 Gata5 protein_coding protein_coding MGP_LPJ_T0001067.1 MGP_LPJ_G0000992.1 mouse_genomes_project 2 10376403 10379639 + TEC TEC MGP_LPJ_T0001134.1 MGP_LPJ_G0001058.1 mouse_genomes_project 2 161894521 161897869 - TEC TEC MGP_LPJ_T0053303.1 MGP_LPJ_G0025433.1 mouse_genomes_project 2 24837327 24851005 - MGP_LPJ_P0053303 Surf4 protein_coding protein_coding MGP_LPJ_T0053304.1 MGP_LPJ_G0025433.1 mouse_genomes_project 2 24839249 24850671 - MGP_LPJ_P0053304 Surf4 protein_coding nonsense_mediated_decay MGP_LPJ_T0053305.1 MGP_LPJ_G0025433.1 mouse_genomes_project 2 24842257 24850858 - MGP_LPJ_P0053305 Surf4 protein_coding protein_coding MGP_LPJ_T0013490.1 MGP_LPJ_G0011581.1 mouse_genomes_project 2 48270910 48271339 + processed_pseudogene processed_pseudogene MGP_LPJ_T0055702.1 MGP_LPJ_G0025975.1 mouse_genomes_project 2 89096182 89097139 - MGP_LPJ_P0055702 Olfr74 protein_coding protein_coding MGP_LPJ_T0055659.1 MGP_LPJ_G0025942.1 mouse_genomes_project 2 88371515 88372439 + MGP_LPJ_P0055659 Olfr1118 protein_coding protein_coding MGP_LPJ_T0059288.1 MGP_LPJ_G0026855.1 mouse_genomes_project 2 173902570 173924495 + MGP_LPJ_P0059288 Pard6b protein_coding protein_coding MGP_LPJ_T0003979.1 MGP_LPJ_G0003553.1 mouse_genomes_project 2 37478394 37494601 + Nr6a1os antisense antisense MGP_LPJ_T0003980.1 MGP_LPJ_G0003553.1 mouse_genomes_project 2 37478470 37509192 + Nr6a1os antisense antisense MGP_LPJ_T0059526.1 MGP_LPJ_G0026919.1 mouse_genomes_project 2 186611742 186659200 + MGP_LPJ_P0059526 Osbpl2 protein_coding protein_coding MGP_LPJ_T0059527.1 MGP_LPJ_G0026919.1 mouse_genomes_project 2 186611771 186630760 + Osbpl2 protein_coding processed_transcript MGP_LPJ_T0059528.1 MGP_LPJ_G0026919.1 mouse_genomes_project 2 186611840 186654177 + Osbpl2 protein_coding retained_intron MGP_LPJ_T0059529.1 MGP_LPJ_G0026919.1 mouse_genomes_project 2 186643036 186645066 + Osbpl2 protein_coding retained_intron MGP_LPJ_T0059181.1 MGP_LPJ_G0026834.1 mouse_genomes_project 2 171721645 171808832 - Sulf2 protein_coding processed_transcript MGP_LPJ_T0059182.1 MGP_LPJ_G0026834.1 mouse_genomes_project 2 171722165 171723512 - Sulf2 protein_coding retained_intron MGP_LPJ_T0059183.1 MGP_LPJ_G0026834.1 mouse_genomes_project 2 171722281 171808063 - MGP_LPJ_P0059183 Sulf2 protein_coding protein_coding MGP_LPJ_T0059184.1 MGP_LPJ_G0026834.1 mouse_genomes_project 2 171722308 171725612 - Sulf2 protein_coding processed_transcript MGP_LPJ_T0059185.1 MGP_LPJ_G0026834.1 mouse_genomes_project 2 171743440 171808033 - Sulf2 protein_coding processed_transcript MGP_LPJ_T0059186.1 MGP_LPJ_G0026834.1 mouse_genomes_project 2 171784346 171807650 - Sulf2 protein_coding processed_transcript MGP_LPJ_T0013480.1 MGP_LPJ_G0011571.1 mouse_genomes_project 2 40879162 40879395 + processed_pseudogene processed_pseudogene MGP_LPJ_T0053394.1 MGP_LPJ_G0025452.1 mouse_genomes_project 2 26472285 26476117 - 1700007K13Rik protein_coding processed_transcript MGP_LPJ_T0053395.1 MGP_LPJ_G0025452.1 mouse_genomes_project 2 26472285 26476639 - MGP_LPJ_P0053395 1700007K13Rik protein_coding protein_coding MGP_LPJ_T0053396.1 MGP_LPJ_G0025452.1 mouse_genomes_project 2 26472632 26476623 - MGP_LPJ_P0053396 1700007K13Rik protein_coding protein_coding MGP_LPJ_T0056732.1 MGP_LPJ_G0026269.1 mouse_genomes_project 2 122216748 122221070 + MGP_LPJ_P0056732 Gchfr protein_coding protein_coding MGP_LPJ_T0058323.1 MGP_LPJ_G0026649.1 mouse_genomes_project 2 159131779 159158030 + MGP_LPJ_P0058323 protein_coding protein_coding MGP_LPJ_T0100615.1 MGP_LPJ_G0038878.1 mouse_genomes_project 2 133983279 133983347 + Snord110 snoRNA snoRNA MGP_LPJ_T0055767.1 MGP_LPJ_G0026034.1 mouse_genomes_project 2 90657635 90658580 - MGP_LPJ_P0055767 Olfr1234 protein_coding protein_coding MGP_LPJ_T0055768.1 MGP_LPJ_G0026034.1 mouse_genomes_project 2 90657635 90660014 - MGP_LPJ_P0055768 Olfr1234 protein_coding protein_coding MGP_LPJ_T0055769.1 MGP_LPJ_G0026034.1 mouse_genomes_project 2 90658716 90660018 - Olfr1234 protein_coding processed_transcript MGP_LPJ_T0055795.1 MGP_LPJ_G0026053.1 mouse_genomes_project 2 91240209 91243523 + MGP_LPJ_P0055795 Olfr1257 protein_coding protein_coding MGP_LPJ_T0055796.1 MGP_LPJ_G0026053.1 mouse_genomes_project 2 91242559 91243575 + MGP_LPJ_P0055796 Olfr1257 protein_coding protein_coding MGP_LPJ_T0102058.1 MGP_LPJ_G0040095.1 mouse_genomes_project 2 91687952 91688877 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0101308.1 MGP_LPJ_G0039528.1 mouse_genomes_project 2 107834100 107834490 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0013789.1 MGP_LPJ_G0011880.1 mouse_genomes_project 2 160430859 160432251 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055626.1 MGP_LPJ_G0025910.1 mouse_genomes_project 2 87266231 87267173 - MGP_LPJ_P0055626 Olfr1061 protein_coding protein_coding MGP_LPJ_T0055014.1 MGP_LPJ_G0025739.1 mouse_genomes_project 2 69720138 69730363 + MGP_LPJ_P0055014 Ssb protein_coding protein_coding MGP_LPJ_T0055015.1 MGP_LPJ_G0025739.1 mouse_genomes_project 2 69720138 69730423 + MGP_LPJ_P0055015 Ssb protein_coding protein_coding MGP_LPJ_T0055016.1 MGP_LPJ_G0025739.1 mouse_genomes_project 2 69720199 69730087 + MGP_LPJ_P0055016 Ssb protein_coding nonsense_mediated_decay MGP_LPJ_T0055017.1 MGP_LPJ_G0025739.1 mouse_genomes_project 2 69720262 69726126 + MGP_LPJ_P0055017 Ssb protein_coding protein_coding MGP_LPJ_T0055018.1 MGP_LPJ_G0025739.1 mouse_genomes_project 2 69721865 69727724 + Ssb protein_coding processed_transcript MGP_LPJ_T0055019.1 MGP_LPJ_G0025739.1 mouse_genomes_project 2 69727352 69730087 + MGP_LPJ_P0055019 Ssb protein_coding protein_coding MGP_LPJ_T0052553.1 MGP_LPJ_G0025297.1 mouse_genomes_project 2 12976469 13732292 + MGP_LPJ_P0052553 Malrd1 protein_coding protein_coding MGP_LPJ_T0053277.1 MGP_LPJ_G0025429.1 mouse_genomes_project 2 24821063 24826479 - MGP_LPJ_P0053277 Med22 protein_coding protein_coding MGP_LPJ_T0053278.1 MGP_LPJ_G0025429.1 mouse_genomes_project 2 24821389 24826371 - MGP_LPJ_P0053278 Med22 protein_coding protein_coding MGP_LPJ_T0053279.1 MGP_LPJ_G0025429.1 mouse_genomes_project 2 24823910 24826380 - MGP_LPJ_P0053279 Med22 protein_coding protein_coding MGP_LPJ_T0013526.1 MGP_LPJ_G0011617.1 mouse_genomes_project 2 58782252 58783048 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055717.1 MGP_LPJ_G0025989.1 mouse_genomes_project 2 89661623 89662553 - MGP_LPJ_P0055717 Olfr1180 protein_coding protein_coding MGP_LPJ_T0057859.1 MGP_LPJ_G0026515.1 mouse_genomes_project 2 148139777 148168284 + MGP_LPJ_P0057859 Dstn protein_coding protein_coding MGP_LPJ_T0013387.1 MGP_LPJ_G0011478.1 mouse_genomes_project 2 8183463 8184274 + processed_pseudogene processed_pseudogene MGP_LPJ_T0053105.1 MGP_LPJ_G0025401.1 mouse_genomes_project 2 23634168 23637431 + MGP_LPJ_P0053105 Lcn11 protein_coding protein_coding MGP_LPJ_T0100604.1 MGP_LPJ_G0038867.1 mouse_genomes_project 2 106802171 106802303 + Gm22439 snoRNA snoRNA MGP_LPJ_T0058325.1 MGP_LPJ_G0026650.1 mouse_genomes_project 2 159195212 159229671 - MGP_LPJ_P0058325 Cdk5rap1 protein_coding protein_coding MGP_LPJ_T0058326.1 MGP_LPJ_G0026650.1 mouse_genomes_project 2 159195218 159229281 - MGP_LPJ_P0058326 Cdk5rap1 protein_coding protein_coding MGP_LPJ_T0058327.1 MGP_LPJ_G0026650.1 mouse_genomes_project 2 159202099 159229323 - Cdk5rap1 protein_coding processed_transcript MGP_LPJ_T0058328.1 MGP_LPJ_G0026650.1 mouse_genomes_project 2 159210739 159214477 - Cdk5rap1 protein_coding retained_intron MGP_LPJ_T0058329.1 MGP_LPJ_G0026650.1 mouse_genomes_project 2 159216131 159229293 - MGP_LPJ_P0058329 Cdk5rap1 protein_coding protein_coding MGP_LPJ_T0058330.1 MGP_LPJ_G0026650.1 mouse_genomes_project 2 159222407 159227348 - Cdk5rap1 protein_coding processed_transcript MGP_LPJ_T0058331.1 MGP_LPJ_G0026650.1 mouse_genomes_project 2 159227240 159229253 - Cdk5rap1 protein_coding processed_transcript MGP_LPJ_T0054684.1 MGP_LPJ_G0025679.1 mouse_genomes_project 2 57670780 57763527 - MGP_LPJ_P0054684 Acvr1c protein_coding protein_coding MGP_LPJ_T0054685.1 MGP_LPJ_G0025679.1 mouse_genomes_project 2 57670780 57763527 - MGP_LPJ_P0054685 Acvr1c protein_coding protein_coding MGP_LPJ_T0054686.1 MGP_LPJ_G0025679.1 mouse_genomes_project 2 57670963 57763455 - MGP_LPJ_P0054686 Acvr1c protein_coding protein_coding MGP_LPJ_T0054687.1 MGP_LPJ_G0025679.1 mouse_genomes_project 2 57695028 57725591 - MGP_LPJ_P0054687 Acvr1c protein_coding protein_coding MGP_LPJ_T0001082.1 MGP_LPJ_G0001007.1 mouse_genomes_project 2 12392836 12394773 + TEC TEC MGP_LPJ_T0013741.1 MGP_LPJ_G0011832.1 mouse_genomes_project 2 144146340 144146778 - processed_pseudogene processed_pseudogene MGP_LPJ_T0053082.1 MGP_LPJ_G0025391.1 mouse_genomes_project 2 23461339 23463278 - MGP_LPJ_P0053082 Tmem141 protein_coding protein_coding MGP_LPJ_T0053083.1 MGP_LPJ_G0025391.1 mouse_genomes_project 2 23461339 23463258 - MGP_LPJ_P0053083 Tmem141 protein_coding protein_coding MGP_LPJ_T0053084.1 MGP_LPJ_G0025391.1 mouse_genomes_project 2 23461376 23463236 - Tmem141 protein_coding processed_transcript MGP_LPJ_T0053085.1 MGP_LPJ_G0025391.1 mouse_genomes_project 2 23461599 23463053 - Tmem141 protein_coding processed_transcript MGP_LPJ_T0053086.1 MGP_LPJ_G0025391.1 mouse_genomes_project 2 23462319 23463244 - Tmem141 protein_coding processed_transcript MGP_LPJ_T0053087.1 MGP_LPJ_G0025391.1 mouse_genomes_project 2 23462319 23463241 - Tmem141 protein_coding processed_transcript MGP_LPJ_T0053088.1 MGP_LPJ_G0025391.1 mouse_genomes_project 2 23462766 23463180 - Tmem141 protein_coding processed_transcript MGP_LPJ_T0057211.1 MGP_LPJ_G0026361.1 mouse_genomes_project 2 128488646 128493010 - Myef2 protein_coding processed_transcript MGP_LPJ_T0057212.1 MGP_LPJ_G0026361.1 mouse_genomes_project 2 128490288 128528690 - MGP_LPJ_P0057212 Myef2 protein_coding nonsense_mediated_decay MGP_LPJ_T0057213.1 MGP_LPJ_G0026361.1 mouse_genomes_project 2 128490585 128528721 - MGP_LPJ_P0057213 Myef2 protein_coding protein_coding MGP_LPJ_T0057214.1 MGP_LPJ_G0026361.1 mouse_genomes_project 2 128491758 128528718 - MGP_LPJ_P0057214 Myef2 protein_coding protein_coding MGP_LPJ_T0057215.1 MGP_LPJ_G0026361.1 mouse_genomes_project 2 128491759 128528756 - MGP_LPJ_P0057215 Myef2 protein_coding protein_coding MGP_LPJ_T0057216.1 MGP_LPJ_G0026361.1 mouse_genomes_project 2 128491759 128528755 - MGP_LPJ_P0057216 Myef2 protein_coding protein_coding MGP_LPJ_T0057217.1 MGP_LPJ_G0026361.1 mouse_genomes_project 2 128492832 128521966 - MGP_LPJ_P0057217 Myef2 protein_coding protein_coding MGP_LPJ_T0057218.1 MGP_LPJ_G0026361.1 mouse_genomes_project 2 128499329 128528509 - MGP_LPJ_P0057218 Myef2 protein_coding protein_coding MGP_LPJ_T0057220.1 MGP_LPJ_G0026361.1 mouse_genomes_project 2 128503248 128528670 - Myef2 protein_coding retained_intron MGP_LPJ_T0017718.1 MGP_LPJ_G0015333.1 mouse_genomes_project 2 37317989 37321999 + Gm13587 processed_transcript processed_transcript MGP_LPJ_T0010481.1 MGP_LPJ_G0008599.1 mouse_genomes_project 2 134782459 134782539 - Mir6973b miRNA miRNA MGP_LPJ_T0003905.1 MGP_LPJ_G0003494.1 mouse_genomes_project 2 3292833 3423070 + A230108P19Rik antisense antisense MGP_LPJ_T0017700.1 MGP_LPJ_G0015322.1 mouse_genomes_project 2 25845831 25849958 - 2810430I11Rik processed_transcript processed_transcript MGP_LPJ_T0052639.1 MGP_LPJ_G0025316.1 mouse_genomes_project 2 17496584 18371284 + MGP_LPJ_P0052639 Etl4 protein_coding protein_coding MGP_LPJ_T0052640.1 MGP_LPJ_G0025316.1 mouse_genomes_project 2 17890110 18284940 + MGP_LPJ_P0052640 Etl4 protein_coding protein_coding MGP_LPJ_T0052641.1 MGP_LPJ_G0025316.1 mouse_genomes_project 2 17890110 18436419 + MGP_LPJ_P0052641 Etl4 protein_coding protein_coding MGP_LPJ_T0052642.1 MGP_LPJ_G0025316.1 mouse_genomes_project 2 17943939 18284806 + MGP_LPJ_P0052642 Etl4 protein_coding protein_coding MGP_LPJ_T0052643.1 MGP_LPJ_G0025316.1 mouse_genomes_project 2 18126684 18436408 + MGP_LPJ_P0052643 Etl4 protein_coding protein_coding MGP_LPJ_T0052644.1 MGP_LPJ_G0025316.1 mouse_genomes_project 2 18126684 18436408 + MGP_LPJ_P0052644 Etl4 protein_coding protein_coding MGP_LPJ_T0052645.1 MGP_LPJ_G0025316.1 mouse_genomes_project 2 18135847 18435769 + MGP_LPJ_P0052645 Etl4 protein_coding protein_coding MGP_LPJ_T0052646.1 MGP_LPJ_G0025316.1 mouse_genomes_project 2 18135867 18336222 + Etl4 protein_coding retained_intron MGP_LPJ_T0052647.1 MGP_LPJ_G0025316.1 mouse_genomes_project 2 18135884 18436420 + MGP_LPJ_P0052647 Etl4 protein_coding protein_coding MGP_LPJ_T0052648.1 MGP_LPJ_G0025316.1 mouse_genomes_project 2 18165113 18333892 + Etl4 protein_coding processed_transcript MGP_LPJ_T0052649.1 MGP_LPJ_G0025316.1 mouse_genomes_project 2 18165155 18285204 + Etl4 protein_coding processed_transcript MGP_LPJ_T0052650.1 MGP_LPJ_G0025316.1 mouse_genomes_project 2 18176931 18333982 + Etl4 protein_coding processed_transcript MGP_LPJ_T0052651.1 MGP_LPJ_G0025316.1 mouse_genomes_project 2 18337654 18370454 + Etl4 protein_coding processed_transcript MGP_LPJ_T0052652.1 MGP_LPJ_G0025316.1 mouse_genomes_project 2 18346718 18429314 + Etl4 protein_coding retained_intron MGP_LPJ_T0052653.1 MGP_LPJ_G0025316.1 mouse_genomes_project 2 18346718 18413485 + Etl4 protein_coding retained_intron MGP_LPJ_T0052654.1 MGP_LPJ_G0025316.1 mouse_genomes_project 2 18346965 18434074 + MGP_LPJ_P0052654 Etl4 protein_coding protein_coding MGP_LPJ_T0052655.1 MGP_LPJ_G0025316.1 mouse_genomes_project 2 18363040 18436597 + MGP_LPJ_P0052655 Etl4 protein_coding protein_coding MGP_LPJ_T0052656.1 MGP_LPJ_G0025316.1 mouse_genomes_project 2 18363040 18436238 + MGP_LPJ_P0052656 Etl4 protein_coding protein_coding MGP_LPJ_T0052657.1 MGP_LPJ_G0025316.1 mouse_genomes_project 2 18424597 18434765 + Etl4 protein_coding processed_transcript MGP_LPJ_T0052658.1 MGP_LPJ_G0025316.1 mouse_genomes_project 2 18433337 18436408 + Etl4 protein_coding retained_intron MGP_LPJ_T0055197.1 MGP_LPJ_G0025773.1 mouse_genomes_project 2 73989432 74072669 - MGP_LPJ_P0055197 protein_coding protein_coding MGP_LPJ_T0055198.1 MGP_LPJ_G0025773.1 mouse_genomes_project 2 73989432 74072574 - MGP_LPJ_P0055198 protein_coding protein_coding MGP_LPJ_T0055199.1 MGP_LPJ_G0025773.1 mouse_genomes_project 2 73989432 74072650 - MGP_LPJ_P0055199 protein_coding protein_coding MGP_LPJ_T0055200.1 MGP_LPJ_G0025773.1 mouse_genomes_project 2 73989432 74072677 - MGP_LPJ_P0055200 protein_coding protein_coding MGP_LPJ_T0055201.1 MGP_LPJ_G0025773.1 mouse_genomes_project 2 73989432 74072652 - MGP_LPJ_P0055201 protein_coding protein_coding MGP_LPJ_T0055202.1 MGP_LPJ_G0025773.1 mouse_genomes_project 2 73989432 74020535 - MGP_LPJ_P0055202 protein_coding protein_coding MGP_LPJ_T0055203.1 MGP_LPJ_G0025773.1 mouse_genomes_project 2 73989443 74072666 - protein_coding processed_transcript MGP_LPJ_T0055204.1 MGP_LPJ_G0025773.1 mouse_genomes_project 2 73989447 74040396 - MGP_LPJ_P0055204 protein_coding protein_coding MGP_LPJ_T0055205.1 MGP_LPJ_G0025773.1 mouse_genomes_project 2 73991182 74072593 - MGP_LPJ_P0055205 protein_coding protein_coding MGP_LPJ_T0055206.1 MGP_LPJ_G0025773.1 mouse_genomes_project 2 73991738 74040344 - MGP_LPJ_P0055206 protein_coding nonsense_mediated_decay MGP_LPJ_T0055207.1 MGP_LPJ_G0025773.1 mouse_genomes_project 2 73991939 74072298 - MGP_LPJ_P0055207 protein_coding unknown_likely_coding MGP_LPJ_T0055208.1 MGP_LPJ_G0025773.1 mouse_genomes_project 2 74000520 74072651 - protein_coding processed_transcript MGP_LPJ_T0055209.1 MGP_LPJ_G0025773.1 mouse_genomes_project 2 74003962 74072568 - MGP_LPJ_P0055209 protein_coding protein_coding MGP_LPJ_T0055210.1 MGP_LPJ_G0025773.1 mouse_genomes_project 2 74019898 74072666 - protein_coding processed_transcript MGP_LPJ_T0055211.1 MGP_LPJ_G0025773.1 mouse_genomes_project 2 74020468 74072631 - MGP_LPJ_P0055211 protein_coding protein_coding MGP_LPJ_T0055212.1 MGP_LPJ_G0025773.1 mouse_genomes_project 2 74020469 74072591 - MGP_LPJ_P0055212 protein_coding protein_coding MGP_LPJ_T0055213.1 MGP_LPJ_G0025773.1 mouse_genomes_project 2 74020763 74026965 - protein_coding processed_transcript MGP_LPJ_T0055214.1 MGP_LPJ_G0025773.1 mouse_genomes_project 2 74039981 74072632 - protein_coding processed_transcript MGP_LPJ_T0055215.1 MGP_LPJ_G0025773.1 mouse_genomes_project 2 74040074 74072666 - protein_coding processed_transcript MGP_LPJ_T0055216.1 MGP_LPJ_G0025773.1 mouse_genomes_project 2 74052703 74072588 - protein_coding processed_transcript MGP_LPJ_T0054693.1 MGP_LPJ_G0025682.1 mouse_genomes_project 2 57985256 58058171 + Upp2 protein_coding processed_transcript MGP_LPJ_T0054694.1 MGP_LPJ_G0025682.1 mouse_genomes_project 2 57985276 58003344 + Upp2 protein_coding processed_transcript MGP_LPJ_T0054695.1 MGP_LPJ_G0025682.1 mouse_genomes_project 2 57985345 58214298 + MGP_LPJ_P0054695 Upp2 protein_coding protein_coding MGP_LPJ_T0054696.1 MGP_LPJ_G0025682.1 mouse_genomes_project 2 58175914 58212569 + MGP_LPJ_P0054696 Upp2 protein_coding protein_coding MGP_LPJ_T0054697.1 MGP_LPJ_G0025682.1 mouse_genomes_project 2 58176152 58211995 + MGP_LPJ_P0054697 Upp2 protein_coding protein_coding MGP_LPJ_T0054698.1 MGP_LPJ_G0025682.1 mouse_genomes_project 2 58186673 58211629 + Upp2 protein_coding processed_transcript MGP_LPJ_T0055622.1 MGP_LPJ_G0025906.1 mouse_genomes_project 2 87166034 87166976 - MGP_LPJ_P0055622 Olfr1056 protein_coding protein_coding MGP_LPJ_T0013781.1 MGP_LPJ_G0011872.1 mouse_genomes_project 2 157162447 157162755 + processed_pseudogene processed_pseudogene MGP_LPJ_T0055285.1 MGP_LPJ_G0025798.1 mouse_genomes_project 2 76908020 76926748 - MGP_LPJ_P0055285 Prkra protein_coding protein_coding MGP_LPJ_T0055286.1 MGP_LPJ_G0025798.1 mouse_genomes_project 2 76914738 76918677 - Prkra protein_coding processed_transcript MGP_LPJ_T0100599.1 MGP_LPJ_G0038862.1 mouse_genomes_project 2 96559407 96559539 - Gm26396 snoRNA snoRNA MGP_LPJ_T0053909.1 MGP_LPJ_G0025531.1 mouse_genomes_project 2 30597089 30606432 - MGP_LPJ_P0053909 Swi5 protein_coding protein_coding MGP_LPJ_T0053910.1 MGP_LPJ_G0025531.1 mouse_genomes_project 2 30597089 30601138 - MGP_LPJ_P0053910 Swi5 protein_coding protein_coding MGP_LPJ_T0053911.1 MGP_LPJ_G0025531.1 mouse_genomes_project 2 30597089 30606369 - MGP_LPJ_P0053911 Swi5 protein_coding nonsense_mediated_decay MGP_LPJ_T0053912.1 MGP_LPJ_G0025531.1 mouse_genomes_project 2 30597089 30606299 - MGP_LPJ_P0053912 Swi5 protein_coding nonsense_mediated_decay MGP_LPJ_T0053913.1 MGP_LPJ_G0025531.1 mouse_genomes_project 2 30597089 30606439 - MGP_LPJ_P0053913 Swi5 protein_coding protein_coding MGP_LPJ_T0053914.1 MGP_LPJ_G0025531.1 mouse_genomes_project 2 30597191 30606433 - MGP_LPJ_P0053914 Swi5 protein_coding protein_coding MGP_LPJ_T0053915.1 MGP_LPJ_G0025531.1 mouse_genomes_project 2 30601554 30606395 - Swi5 protein_coding retained_intron MGP_LPJ_T0101657.1 MGP_LPJ_G0039709.1 mouse_genomes_project 2 148712314 148720716 + unitary_pseudogene processed_transcript MGP_LPJ_T0101658.1 MGP_LPJ_G0039709.1 mouse_genomes_project 2 148717325 148753056 + unitary_pseudogene processed_transcript MGP_LPJ_T0101659.1 MGP_LPJ_G0039709.1 mouse_genomes_project 2 148717390 148719654 + unitary_pseudogene unitary_pseudogene MGP_LPJ_T0101660.1 MGP_LPJ_G0039709.1 mouse_genomes_project 2 148718105 148719661 + unitary_pseudogene processed_transcript MGP_LPJ_T0007289.1 MGP_LPJ_G0005980.1 mouse_genomes_project 2 105280717 105285815 + Gm13874 lincRNA lincRNA MGP_LPJ_T0007290.1 MGP_LPJ_G0005980.1 mouse_genomes_project 2 105281101 105285815 + Gm13874 lincRNA lincRNA MGP_LPJ_T0007291.1 MGP_LPJ_G0005980.1 mouse_genomes_project 2 105285148 105289610 + Gm13874 lincRNA lincRNA MGP_LPJ_T0099351.1 MGP_LPJ_G0037614.1 mouse_genomes_project 2 128508611 128508718 + Gm22352 snRNA snRNA MGP_LPJ_T0055160.1 MGP_LPJ_G0025764.1 mouse_genomes_project 2 73088060 73103936 - MGP_LPJ_P0055160 Gm11084 protein_coding protein_coding MGP_LPJ_T0001077.1 MGP_LPJ_G0001002.1 mouse_genomes_project 2 11610755 11616652 - TEC TEC MGP_LPJ_T0058073.1 MGP_LPJ_G0026573.1 mouse_genomes_project 2 155629272 155630528 - MGP_LPJ_P0058073 protein_coding protein_coding MGP_LPJ_T0054816.1 MGP_LPJ_G0025699.1 mouse_genomes_project 2 61552709 61836929 + MGP_LPJ_P0054816 Slc4a10 protein_coding protein_coding MGP_LPJ_T0054817.1 MGP_LPJ_G0025699.1 mouse_genomes_project 2 61552832 61835022 + Slc4a10 protein_coding processed_transcript MGP_LPJ_T0054818.1 MGP_LPJ_G0025699.1 mouse_genomes_project 2 61552832 61836929 + MGP_LPJ_P0054818 Slc4a10 protein_coding protein_coding MGP_LPJ_T0054819.1 MGP_LPJ_G0025699.1 mouse_genomes_project 2 61552892 61836929 + MGP_LPJ_P0054819 Slc4a10 protein_coding protein_coding MGP_LPJ_T0054820.1 MGP_LPJ_G0025699.1 mouse_genomes_project 2 61662355 61672714 + Slc4a10 protein_coding processed_transcript MGP_LPJ_T0054821.1 MGP_LPJ_G0025699.1 mouse_genomes_project 2 61774831 61776567 + Slc4a10 protein_coding processed_transcript MGP_LPJ_T0054822.1 MGP_LPJ_G0025699.1 mouse_genomes_project 2 61825884 61835576 + Slc4a10 protein_coding processed_transcript MGP_LPJ_T0058810.1 MGP_LPJ_G0026740.1 mouse_genomes_project 2 165942866 166029532 + MGP_LPJ_P0058810 Top1 protein_coding protein_coding MGP_LPJ_T0058811.1 MGP_LPJ_G0026740.1 mouse_genomes_project 2 165942958 165947086 + Top1 protein_coding processed_transcript MGP_LPJ_T0058812.1 MGP_LPJ_G0026740.1 mouse_genomes_project 2 165975632 165990443 + Top1 protein_coding retained_intron MGP_LPJ_T0058813.1 MGP_LPJ_G0026740.1 mouse_genomes_project 2 165991160 165999859 + Top1 protein_coding retained_intron MGP_LPJ_T0058814.1 MGP_LPJ_G0026740.1 mouse_genomes_project 2 166009004 166010541 + Top1 protein_coding processed_transcript MGP_LPJ_T0058815.1 MGP_LPJ_G0026740.1 mouse_genomes_project 2 166024306 166028152 + Top1 protein_coding retained_intron MGP_LPJ_T0007216.1 MGP_LPJ_G0005919.1 mouse_genomes_project 2 50825923 50901257 - Gm13490 lincRNA lincRNA MGP_LPJ_T0055709.1 MGP_LPJ_G0025981.1 mouse_genomes_project 2 89194716 89195667 - MGP_LPJ_P0055709 Olfr1163 protein_coding protein_coding MGP_LPJ_T0059014.1 MGP_LPJ_G0026802.1 mouse_genomes_project 2 170253240 170257187 + MGP_LPJ_P0059014 Spint4 protein_coding protein_coding MGP_LPJ_T0059366.1 MGP_LPJ_G0026876.1 mouse_genomes_project 2 178457176 178471521 - MGP_LPJ_P0059366 Aurka protein_coding protein_coding MGP_LPJ_T0059367.1 MGP_LPJ_G0026876.1 mouse_genomes_project 2 178457182 178471492 - MGP_LPJ_P0059367 Aurka protein_coding protein_coding MGP_LPJ_T0059368.1 MGP_LPJ_G0026876.1 mouse_genomes_project 2 178457381 178471688 - MGP_LPJ_P0059368 Aurka protein_coding unknown_likely_coding MGP_LPJ_T0059369.1 MGP_LPJ_G0026876.1 mouse_genomes_project 2 178458152 178464085 - Aurka protein_coding retained_intron MGP_LPJ_T0059370.1 MGP_LPJ_G0026876.1 mouse_genomes_project 2 178467555 178471507 - Aurka protein_coding retained_intron MGP_LPJ_T0013602.1 MGP_LPJ_G0011693.1 mouse_genomes_project 2 85766510 85766731 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017729.1 MGP_LPJ_G0015340.1 mouse_genomes_project 2 66093160 66107467 + Gm13630 processed_transcript processed_transcript MGP_LPJ_T0055607.1 MGP_LPJ_G0025891.1 mouse_genomes_project 2 86919163 86920123 - MGP_LPJ_P0055607 protein_coding protein_coding MGP_LPJ_T0058160.1 MGP_LPJ_G0026596.1 mouse_genomes_project 2 157115124 157146812 + MGP_LPJ_P0058160 6820408C15Rik protein_coding protein_coding MGP_LPJ_T0058161.1 MGP_LPJ_G0026596.1 mouse_genomes_project 2 157129269 157146811 + MGP_LPJ_P0058161 6820408C15Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0058162.1 MGP_LPJ_G0026596.1 mouse_genomes_project 2 157129296 157142122 + MGP_LPJ_P0058162 6820408C15Rik protein_coding protein_coding MGP_LPJ_T0013550.1 MGP_LPJ_G0011641.1 mouse_genomes_project 2 69132905 69133407 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017713.1 MGP_LPJ_G0015331.1 mouse_genomes_project 2 34118455 34127642 - Gm13446 processed_transcript processed_transcript MGP_LPJ_T0017714.1 MGP_LPJ_G0015331.1 mouse_genomes_project 2 34123766 34127425 - Gm13446 processed_transcript processed_transcript MGP_LPJ_T0004183.1 MGP_LPJ_G0003696.1 mouse_genomes_project 2 170749602 170754149 + Gm14397 antisense antisense MGP_LPJ_T0017686.1 MGP_LPJ_G0015315.1 mouse_genomes_project 2 17010405 17011729 + 1810010K12Rik processed_transcript processed_transcript MGP_LPJ_T0017687.1 MGP_LPJ_G0015315.1 mouse_genomes_project 2 17011047 17013573 + 1810010K12Rik processed_transcript processed_transcript MGP_LPJ_T0056733.1 MGP_LPJ_G0026270.1 mouse_genomes_project 2 122221171 122235252 - MGP_LPJ_P0056733 Dnajc17 protein_coding unknown_likely_coding MGP_LPJ_T0056734.1 MGP_LPJ_G0026270.1 mouse_genomes_project 2 122221179 122259393 - MGP_LPJ_P0056734 Dnajc17 protein_coding protein_coding MGP_LPJ_T0056736.1 MGP_LPJ_G0026270.1 mouse_genomes_project 2 122228119 122232352 - Dnajc17 protein_coding processed_transcript MGP_LPJ_T0056737.1 MGP_LPJ_G0026270.1 mouse_genomes_project 2 122232389 122259380 - Dnajc17 protein_coding retained_intron MGP_LPJ_T0054691.1 MGP_LPJ_G0025681.1 mouse_genomes_project 2 57887372 57888334 + MGP_LPJ_P0054691 Gm17409 protein_coding protein_coding MGP_LPJ_T0058087.1 MGP_LPJ_G0026576.1 mouse_genomes_project 2 156196953 156216158 + MGP_LPJ_P0058087 Fkbp1a protein_coding protein_coding MGP_LPJ_T0058088.1 MGP_LPJ_G0026576.1 mouse_genomes_project 2 156197055 156215294 + Fkbp1a protein_coding processed_transcript MGP_LPJ_T0058089.1 MGP_LPJ_G0026576.1 mouse_genomes_project 2 156197064 156214086 + Fkbp1a protein_coding processed_transcript MGP_LPJ_T0058090.1 MGP_LPJ_G0026576.1 mouse_genomes_project 2 156197064 156199148 + Fkbp1a protein_coding retained_intron MGP_LPJ_T0058091.1 MGP_LPJ_G0026576.1 mouse_genomes_project 2 156197085 156214294 + Fkbp1a protein_coding retained_intron MGP_LPJ_T0058092.1 MGP_LPJ_G0026576.1 mouse_genomes_project 2 156197091 156215408 + Fkbp1a protein_coding processed_transcript MGP_LPJ_T0058093.1 MGP_LPJ_G0026576.1 mouse_genomes_project 2 156197166 156211940 + Fkbp1a protein_coding processed_transcript MGP_LPJ_T0058094.1 MGP_LPJ_G0026576.1 mouse_genomes_project 2 156197207 156215119 + Fkbp1a protein_coding processed_transcript MGP_LPJ_T0058095.1 MGP_LPJ_G0026576.1 mouse_genomes_project 2 156198369 156216156 + MGP_LPJ_P0058095 Fkbp1a protein_coding protein_coding MGP_LPJ_T0058096.1 MGP_LPJ_G0026576.1 mouse_genomes_project 2 156199880 156215179 + Fkbp1a protein_coding processed_transcript MGP_LPJ_T0013600.1 MGP_LPJ_G0011691.1 mouse_genomes_project 2 84240654 84241907 - processed_pseudogene processed_pseudogene MGP_LPJ_T0057565.1 MGP_LPJ_G0026453.1 mouse_genomes_project 2 134400086 134413450 - MGP_LPJ_P0057565 protein_coding unknown_likely_coding MGP_LPJ_T0057566.1 MGP_LPJ_G0026453.1 mouse_genomes_project 2 134400087 134404539 - protein_coding retained_intron MGP_LPJ_T0057567.1 MGP_LPJ_G0026453.1 mouse_genomes_project 2 134402551 134413640 - protein_coding retained_intron MGP_LPJ_T0057568.1 MGP_LPJ_G0026453.1 mouse_genomes_project 2 134406654 134407804 - protein_coding retained_intron MGP_LPJ_T0057569.1 MGP_LPJ_G0026453.1 mouse_genomes_project 2 134407370 134413640 - MGP_LPJ_P0057569 protein_coding protein_coding MGP_LPJ_T0052727.1 MGP_LPJ_G0025327.1 mouse_genomes_project 2 20786339 20837577 - MGP_LPJ_P0052727 Mastl protein_coding protein_coding MGP_LPJ_T0052728.1 MGP_LPJ_G0025327.1 mouse_genomes_project 2 20812320 20837450 - Mastl protein_coding processed_transcript MGP_LPJ_T0055125.1 MGP_LPJ_G0025759.1 mouse_genomes_project 2 71920072 71951023 + MGP_LPJ_P0055125 Pdk1 protein_coding protein_coding MGP_LPJ_T0055126.1 MGP_LPJ_G0025759.1 mouse_genomes_project 2 71920168 71931004 + Pdk1 protein_coding processed_transcript MGP_LPJ_T0055127.1 MGP_LPJ_G0025759.1 mouse_genomes_project 2 71920174 71933426 + Pdk1 protein_coding processed_transcript MGP_LPJ_T0055128.1 MGP_LPJ_G0025759.1 mouse_genomes_project 2 71920194 71949132 + Pdk1 protein_coding processed_transcript MGP_LPJ_T0055129.1 MGP_LPJ_G0025759.1 mouse_genomes_project 2 71920393 71931255 + Pdk1 protein_coding processed_transcript MGP_LPJ_T0055130.1 MGP_LPJ_G0025759.1 mouse_genomes_project 2 71920585 71936079 + Pdk1 protein_coding processed_transcript MGP_LPJ_T0055131.1 MGP_LPJ_G0025759.1 mouse_genomes_project 2 71921939 71930683 + Pdk1 protein_coding processed_transcript MGP_LPJ_T0055132.1 MGP_LPJ_G0025759.1 mouse_genomes_project 2 71934542 71943618 + Pdk1 protein_coding processed_transcript MGP_LPJ_T0055514.1 MGP_LPJ_G0025843.1 mouse_genomes_project 2 85321568 85324777 + MGP_LPJ_P0055514 Timm10 protein_coding protein_coding MGP_LPJ_T0055515.1 MGP_LPJ_G0025843.1 mouse_genomes_project 2 85321955 85324677 + MGP_LPJ_P0055515 Timm10 protein_coding protein_coding MGP_LPJ_T0057628.1 MGP_LPJ_G0026464.1 mouse_genomes_project 2 134929083 134940603 + MGP_LPJ_P0057628 Cdc25b protein_coding protein_coding MGP_LPJ_T0057629.1 MGP_LPJ_G0026464.1 mouse_genomes_project 2 134929092 134940605 + MGP_LPJ_P0057629 Cdc25b protein_coding protein_coding MGP_LPJ_T0057630.1 MGP_LPJ_G0026464.1 mouse_genomes_project 2 134930292 134934065 + Cdc25b protein_coding retained_intron MGP_LPJ_T0057631.1 MGP_LPJ_G0026464.1 mouse_genomes_project 2 134933496 134934249 + Cdc25b protein_coding retained_intron MGP_LPJ_T0057632.1 MGP_LPJ_G0026464.1 mouse_genomes_project 2 134933889 134935539 + Cdc25b protein_coding retained_intron MGP_LPJ_T0057633.1 MGP_LPJ_G0026464.1 mouse_genomes_project 2 134933959 134935426 + Cdc25b protein_coding retained_intron MGP_LPJ_T0057634.1 MGP_LPJ_G0026464.1 mouse_genomes_project 2 134935020 134936553 + Cdc25b protein_coding retained_intron MGP_LPJ_T0055910.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92653107 92697426 - MGP_LPJ_P0055910 Madd protein_coding protein_coding MGP_LPJ_T0055911.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92653115 92699553 - MGP_LPJ_P0055911 Madd protein_coding protein_coding MGP_LPJ_T0055912.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92653115 92704077 - MGP_LPJ_P0055912 Madd protein_coding protein_coding MGP_LPJ_T0055913.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92653115 92704077 - MGP_LPJ_P0055913 Madd protein_coding protein_coding MGP_LPJ_T0055914.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92653115 92704077 - MGP_LPJ_P0055914 Madd protein_coding protein_coding MGP_LPJ_T0055915.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92653115 92699559 - MGP_LPJ_P0055915 Madd protein_coding protein_coding MGP_LPJ_T0055916.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92653115 92699555 - MGP_LPJ_P0055916 Madd protein_coding protein_coding MGP_LPJ_T0055917.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92653115 92699564 - MGP_LPJ_P0055917 Madd protein_coding protein_coding MGP_LPJ_T0055918.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92653115 92704077 - MGP_LPJ_P0055918 Madd protein_coding protein_coding MGP_LPJ_T0055919.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92653115 92703147 - MGP_LPJ_P0055919 Madd protein_coding protein_coding MGP_LPJ_T0055920.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92653115 92704077 - MGP_LPJ_P0055920 Madd protein_coding protein_coding MGP_LPJ_T0055921.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92653116 92704077 - Madd protein_coding processed_transcript MGP_LPJ_T0055922.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92653116 92704077 - Madd protein_coding processed_transcript MGP_LPJ_T0055923.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92653116 92704077 - Madd protein_coding processed_transcript MGP_LPJ_T0055924.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92653116 92704077 - Madd protein_coding processed_transcript MGP_LPJ_T0055925.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92653116 92704077 - Madd protein_coding processed_transcript MGP_LPJ_T0055926.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92653116 92704077 - MGP_LPJ_P0055926 Madd protein_coding protein_coding MGP_LPJ_T0055927.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92654091 92654998 - Madd protein_coding retained_intron MGP_LPJ_T0055928.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92658683 92667857 - Madd protein_coding retained_intron MGP_LPJ_T0055929.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92658873 92670320 - Madd protein_coding retained_intron MGP_LPJ_T0055930.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92667512 92670164 - Madd protein_coding retained_intron MGP_LPJ_T0055931.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92670926 92675704 - Madd protein_coding retained_intron MGP_LPJ_T0055932.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92676392 92703285 - Madd protein_coding retained_intron MGP_LPJ_T0055933.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92676739 92703306 - MGP_LPJ_P0055933 Madd protein_coding protein_coding MGP_LPJ_T0055934.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92683147 92692580 - MGP_LPJ_P0055934 Madd protein_coding protein_coding MGP_LPJ_T0055935.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92695826 92704096 - Madd protein_coding retained_intron MGP_LPJ_T0055936.1 MGP_LPJ_G0026082.1 mouse_genomes_project 2 92698686 92703298 - Madd protein_coding processed_transcript MGP_LPJ_T0099314.1 MGP_LPJ_G0037577.1 mouse_genomes_project 2 8393765 8393898 - Gm26478 snRNA snRNA MGP_LPJ_T0013725.1 MGP_LPJ_G0011816.1 mouse_genomes_project 2 135210683 135211196 - processed_pseudogene processed_pseudogene MGP_LPJ_T0054581.1 MGP_LPJ_G0025657.1 mouse_genomes_project 2 49417146 49433964 - Mmadhc protein_coding processed_transcript MGP_LPJ_T0054582.1 MGP_LPJ_G0025657.1 mouse_genomes_project 2 49417146 49433986 - MGP_LPJ_P0054582 Mmadhc protein_coding protein_coding MGP_LPJ_T0054583.1 MGP_LPJ_G0025657.1 mouse_genomes_project 2 49417615 49433956 - Mmadhc protein_coding processed_transcript MGP_LPJ_T0054584.1 MGP_LPJ_G0025657.1 mouse_genomes_project 2 49418406 49433950 - MGP_LPJ_P0054584 Mmadhc protein_coding protein_coding MGP_LPJ_T0054585.1 MGP_LPJ_G0025657.1 mouse_genomes_project 2 49418419 49433692 - Mmadhc protein_coding processed_transcript MGP_LPJ_T0054586.1 MGP_LPJ_G0025657.1 mouse_genomes_project 2 49418431 49426459 - Mmadhc protein_coding processed_transcript MGP_LPJ_T0054587.1 MGP_LPJ_G0025657.1 mouse_genomes_project 2 49425112 49433945 - Mmadhc protein_coding processed_transcript MGP_LPJ_T0054588.1 MGP_LPJ_G0025657.1 mouse_genomes_project 2 49425125 49434070 - MGP_LPJ_P0054588 Mmadhc protein_coding protein_coding MGP_LPJ_T0058212.1 MGP_LPJ_G0026619.1 mouse_genomes_project 2 157714566 157763654 + MGP_LPJ_P0058212 Ttll9 protein_coding protein_coding MGP_LPJ_T0058213.1 MGP_LPJ_G0026619.1 mouse_genomes_project 2 157714587 157759518 + MGP_LPJ_P0058213 Ttll9 protein_coding nonsense_mediated_decay MGP_LPJ_T0058214.1 MGP_LPJ_G0026619.1 mouse_genomes_project 2 157714587 157759525 + MGP_LPJ_P0058214 Ttll9 protein_coding nonsense_mediated_decay MGP_LPJ_T0058215.1 MGP_LPJ_G0026619.1 mouse_genomes_project 2 157714587 157759569 + MGP_LPJ_P0058215 Ttll9 protein_coding protein_coding MGP_LPJ_T0058216.1 MGP_LPJ_G0026619.1 mouse_genomes_project 2 157714592 157763285 + MGP_LPJ_P0058216 Ttll9 protein_coding nonsense_mediated_decay MGP_LPJ_T0058217.1 MGP_LPJ_G0026619.1 mouse_genomes_project 2 157727943 157763654 + MGP_LPJ_P0058217 Ttll9 protein_coding nonsense_mediated_decay MGP_LPJ_T0058218.1 MGP_LPJ_G0026619.1 mouse_genomes_project 2 157729220 157739946 + MGP_LPJ_P0058218 Ttll9 protein_coding protein_coding MGP_LPJ_T0058219.1 MGP_LPJ_G0026619.1 mouse_genomes_project 2 157745063 157754964 + Ttll9 protein_coding retained_intron MGP_LPJ_T0058220.1 MGP_LPJ_G0026619.1 mouse_genomes_project 2 157759119 157764796 + Ttll9 protein_coding retained_intron MGP_LPJ_T0010513.1 MGP_LPJ_G0008631.1 mouse_genomes_project 2 187466664 187466732 + Mir124a-3 miRNA miRNA MGP_LPJ_T0098520.1 MGP_LPJ_G0036795.1 mouse_genomes_project 2 1194616 1197170 + Gm37107 sense_intronic sense_intronic MGP_LPJ_T0059711.1 MGP_LPJ_G0026954.1 mouse_genomes_project 2 187993124 187996162 + MGP_LPJ_P0059711 Lime1 protein_coding protein_coding MGP_LPJ_T0059712.1 MGP_LPJ_G0026954.1 mouse_genomes_project 2 187994281 187996675 + MGP_LPJ_P0059712 Lime1 protein_coding protein_coding MGP_LPJ_T0059713.1 MGP_LPJ_G0026954.1 mouse_genomes_project 2 187994404 187996601 + Lime1 protein_coding retained_intron MGP_LPJ_T0059714.1 MGP_LPJ_G0026954.1 mouse_genomes_project 2 187994404 187996001 + Lime1 protein_coding retained_intron MGP_LPJ_T0059715.1 MGP_LPJ_G0026954.1 mouse_genomes_project 2 187994404 187996670 + MGP_LPJ_P0059715 Lime1 protein_coding protein_coding MGP_LPJ_T0059717.1 MGP_LPJ_G0026954.1 mouse_genomes_project 2 187994918 187996675 + MGP_LPJ_P0059717 Lime1 protein_coding protein_coding MGP_LPJ_T0059718.1 MGP_LPJ_G0026954.1 mouse_genomes_project 2 187995532 187996360 + Lime1 protein_coding retained_intron MGP_LPJ_T0052367.1 MGP_LPJ_G0025270.1 mouse_genomes_project 2 7385460 7488313 + MGP_LPJ_P0052367 Itih5 protein_coding protein_coding MGP_LPJ_T0053359.1 MGP_LPJ_G0025445.1 mouse_genomes_project 2 25378358 25408412 - MGP_LPJ_P0053359 Brd3 protein_coding protein_coding MGP_LPJ_T0053360.1 MGP_LPJ_G0025445.1 mouse_genomes_project 2 25378358 25408700 - MGP_LPJ_P0053360 Brd3 protein_coding protein_coding MGP_LPJ_T0053361.1 MGP_LPJ_G0025445.1 mouse_genomes_project 2 25378379 25408687 - MGP_LPJ_P0053361 Brd3 protein_coding protein_coding MGP_LPJ_T0053362.1 MGP_LPJ_G0025445.1 mouse_genomes_project 2 25380622 25397097 - MGP_LPJ_P0053362 Brd3 protein_coding protein_coding MGP_LPJ_T0053363.1 MGP_LPJ_G0025445.1 mouse_genomes_project 2 25382250 25444609 - MGP_LPJ_P0053363 Brd3 protein_coding protein_coding MGP_LPJ_T0053364.1 MGP_LPJ_G0025445.1 mouse_genomes_project 2 25382250 25408668 - MGP_LPJ_P0053364 Brd3 protein_coding protein_coding MGP_LPJ_T0053365.1 MGP_LPJ_G0025445.1 mouse_genomes_project 2 25385976 25408667 - Brd3 protein_coding processed_transcript MGP_LPJ_T0053366.1 MGP_LPJ_G0025445.1 mouse_genomes_project 2 25396511 25408621 - MGP_LPJ_P0053366 Brd3 protein_coding protein_coding MGP_LPJ_T0053367.1 MGP_LPJ_G0025445.1 mouse_genomes_project 2 25396872 25397563 - Brd3 protein_coding processed_transcript MGP_LPJ_T0053368.1 MGP_LPJ_G0025445.1 mouse_genomes_project 2 25396979 25408195 - Brd3 protein_coding processed_transcript MGP_LPJ_T0057687.1 MGP_LPJ_G0026475.1 mouse_genomes_project 2 135752767 135792907 - MGP_LPJ_P0057687 Rassf2 protein_coding protein_coding MGP_LPJ_T0057688.1 MGP_LPJ_G0026475.1 mouse_genomes_project 2 135756145 135793107 - MGP_LPJ_P0057688 Rassf2 protein_coding protein_coding MGP_LPJ_T0057689.1 MGP_LPJ_G0026475.1 mouse_genomes_project 2 135763886 135784079 - Rassf2 protein_coding retained_intron MGP_LPJ_T0057690.1 MGP_LPJ_G0026475.1 mouse_genomes_project 2 135765869 135793163 - MGP_LPJ_P0057690 Rassf2 protein_coding protein_coding MGP_LPJ_T0057691.1 MGP_LPJ_G0026475.1 mouse_genomes_project 2 135772677 135792072 - MGP_LPJ_P0057691 Rassf2 protein_coding protein_coding MGP_LPJ_T0007273.1 MGP_LPJ_G0005968.1 mouse_genomes_project 2 94115450 94162517 + Gm13814 lincRNA lincRNA MGP_LPJ_T0010370.1 MGP_LPJ_G0008488.1 mouse_genomes_project 2 7779973 7780100 + Gm22091 miRNA miRNA MGP_LPJ_T0053103.1 MGP_LPJ_G0025399.1 mouse_genomes_project 2 23583517 23586592 + MGP_LPJ_P0053103 Obp2b protein_coding protein_coding MGP_LPJ_T0004136.1 MGP_LPJ_G0003659.1 mouse_genomes_project 2 151580628 151742634 + antisense antisense MGP_LPJ_T0013775.1 MGP_LPJ_G0011866.1 mouse_genomes_project 2 155056780 155057535 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055863.1 MGP_LPJ_G0026075.1 mouse_genomes_project 2 92406139 92411874 + MGP_LPJ_P0055863 Kbtbd4 protein_coding protein_coding MGP_LPJ_T0055864.1 MGP_LPJ_G0026075.1 mouse_genomes_project 2 92406142 92411874 + MGP_LPJ_P0055864 Kbtbd4 protein_coding protein_coding MGP_LPJ_T0055865.1 MGP_LPJ_G0026075.1 mouse_genomes_project 2 92406168 92407007 + Kbtbd4 protein_coding processed_transcript MGP_LPJ_T0055866.1 MGP_LPJ_G0026075.1 mouse_genomes_project 2 92406464 92407443 + Kbtbd4 protein_coding processed_transcript MGP_LPJ_T0055867.1 MGP_LPJ_G0026075.1 mouse_genomes_project 2 92410476 92412939 + Kbtbd4 protein_coding processed_transcript MGP_LPJ_T0058754.1 MGP_LPJ_G0026726.1 mouse_genomes_project 2 163412610 163444539 + MGP_LPJ_P0058754 Bpi protein_coding protein_coding MGP_LPJ_T0058755.1 MGP_LPJ_G0026726.1 mouse_genomes_project 2 163412610 163444403 + MGP_LPJ_P0058755 Bpi protein_coding protein_coding MGP_LPJ_T0058756.1 MGP_LPJ_G0026726.1 mouse_genomes_project 2 163412610 163444542 + MGP_LPJ_P0058756 Bpi protein_coding protein_coding MGP_LPJ_T0013743.1 MGP_LPJ_G0011834.1 mouse_genomes_project 2 145057508 145057993 - processed_pseudogene processed_pseudogene MGP_LPJ_T0058130.1 MGP_LPJ_G0026587.1 mouse_genomes_project 2 156787091 156790911 + Srxn1 protein_coding processed_transcript MGP_LPJ_T0058131.1 MGP_LPJ_G0026587.1 mouse_genomes_project 2 156787091 156790800 + Srxn1 protein_coding processed_transcript MGP_LPJ_T0058132.1 MGP_LPJ_G0026587.1 mouse_genomes_project 2 156787099 156792965 + MGP_LPJ_P0058132 Srxn1 protein_coding protein_coding MGP_LPJ_T0055773.1 MGP_LPJ_G0026038.1 mouse_genomes_project 2 90787646 90788591 - MGP_LPJ_P0055773 Olfr1241 protein_coding protein_coding MGP_LPJ_T0055763.1 MGP_LPJ_G0026030.1 mouse_genomes_project 2 90589142 90590060 - MGP_LPJ_P0055763 Olfr1230 protein_coding protein_coding MGP_LPJ_T0055296.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 76982735 77284279 - MGP_LPJ_P0055296 Ttn protein_coding protein_coding MGP_LPJ_T0055297.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 76982735 77284279 - MGP_LPJ_P0055297 Ttn protein_coding protein_coding MGP_LPJ_T0055298.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 76982739 77284371 - MGP_LPJ_P0055298 Ttn protein_coding protein_coding MGP_LPJ_T0055299.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 76983786 77282006 - MGP_LPJ_P0055299 Ttn protein_coding protein_coding MGP_LPJ_T0055300.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 76983786 77282006 - MGP_LPJ_P0055300 Ttn protein_coding unknown_likely_coding MGP_LPJ_T0055301.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 77095414 77237971 - MGP_LPJ_P0055301 Ttn protein_coding protein_coding MGP_LPJ_T0055302.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 77096084 77181493 - MGP_LPJ_P0055302 Ttn protein_coding protein_coding MGP_LPJ_T0055303.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 77096118 77155061 - MGP_LPJ_P0055303 Ttn protein_coding protein_coding MGP_LPJ_T0055304.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 77096119 77155061 - MGP_LPJ_P0055304 Ttn protein_coding protein_coding MGP_LPJ_T0055305.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 77096119 77155061 - MGP_LPJ_P0055305 Ttn protein_coding protein_coding MGP_LPJ_T0055306.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 77096119 77155061 - MGP_LPJ_P0055306 Ttn protein_coding protein_coding MGP_LPJ_T0055307.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 77096137 77155061 - MGP_LPJ_P0055307 Ttn protein_coding protein_coding MGP_LPJ_T0055308.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 77103107 77108519 - MGP_LPJ_P0055308 Ttn protein_coding protein_coding MGP_LPJ_T0055309.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 77104506 77127838 - MGP_LPJ_P0055309 Ttn protein_coding protein_coding MGP_LPJ_T0055310.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 77117350 77118274 - MGP_LPJ_P0055310 Ttn protein_coding protein_coding MGP_LPJ_T0055311.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 77118125 77119792 - MGP_LPJ_P0055311 Ttn protein_coding protein_coding MGP_LPJ_T0055312.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 77122649 77125581 - MGP_LPJ_P0055312 Ttn protein_coding protein_coding MGP_LPJ_T0055313.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 77122649 77123499 - MGP_LPJ_P0055313 Ttn protein_coding protein_coding MGP_LPJ_T0055314.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 77130915 77133850 - MGP_LPJ_P0055314 Ttn protein_coding protein_coding MGP_LPJ_T0055315.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 77135950 77162182 - MGP_LPJ_P0055315 Ttn protein_coding protein_coding MGP_LPJ_T0055316.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 77180318 77181075 - Ttn protein_coding processed_transcript MGP_LPJ_T0055317.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 77199058 77284279 - MGP_LPJ_P0055317 Ttn protein_coding protein_coding MGP_LPJ_T0055318.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 77241588 77244189 - Ttn protein_coding retained_intron MGP_LPJ_T0055319.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 77264898 77284371 - Ttn protein_coding retained_intron MGP_LPJ_T0055320.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 77265704 77284371 - MGP_LPJ_P0055320 Ttn protein_coding protein_coding MGP_LPJ_T0055321.1 MGP_LPJ_G0025802.1 mouse_genomes_project 2 77273663 77284371 - Ttn protein_coding retained_intron MGP_LPJ_T0056933.1 MGP_LPJ_G0026308.1 mouse_genomes_project 2 123766235 123817796 + MGP_LPJ_P0056933 protein_coding protein_coding MGP_LPJ_T0056934.1 MGP_LPJ_G0026308.1 mouse_genomes_project 2 123766333 123854285 + MGP_LPJ_P0056934 protein_coding protein_coding MGP_LPJ_T0056935.1 MGP_LPJ_G0026308.1 mouse_genomes_project 2 123766333 123852863 + MGP_LPJ_P0056935 protein_coding unknown_likely_coding MGP_LPJ_T0056936.1 MGP_LPJ_G0026308.1 mouse_genomes_project 2 123820709 123854285 + MGP_LPJ_P0056936 protein_coding protein_coding MGP_LPJ_T0056937.1 MGP_LPJ_G0026308.1 mouse_genomes_project 2 123837282 123854035 + MGP_LPJ_P0056937 protein_coding protein_coding MGP_LPJ_T0056938.1 MGP_LPJ_G0026308.1 mouse_genomes_project 2 123840533 123870810 + MGP_LPJ_P0056938 protein_coding nonsense_mediated_decay MGP_LPJ_T0056939.1 MGP_LPJ_G0026308.1 mouse_genomes_project 2 123851916 123854083 + protein_coding retained_intron MGP_LPJ_T0056940.1 MGP_LPJ_G0026308.1 mouse_genomes_project 2 123853470 123868280 + protein_coding processed_transcript MGP_LPJ_T0010427.1 MGP_LPJ_G0008545.1 mouse_genomes_project 2 31770914 31770967 - Gm25998 miRNA miRNA MGP_LPJ_T0017715.1 MGP_LPJ_G0015332.1 mouse_genomes_project 2 34816002 34817911 + Gm13429 processed_transcript processed_transcript MGP_LPJ_T0017716.1 MGP_LPJ_G0015332.1 mouse_genomes_project 2 34816473 34826534 + Gm13429 processed_transcript processed_transcript MGP_LPJ_T0017717.1 MGP_LPJ_G0015332.1 mouse_genomes_project 2 34824402 34826533 + Gm13429 processed_transcript processed_transcript MGP_LPJ_T0054599.1 MGP_LPJ_G0025661.1 mouse_genomes_project 2 51134132 51163533 - MGP_LPJ_P0054599 Nmi protein_coding protein_coding MGP_LPJ_T0054600.1 MGP_LPJ_G0025661.1 mouse_genomes_project 2 51134146 51163313 - MGP_LPJ_P0054600 Nmi protein_coding protein_coding MGP_LPJ_T0054601.1 MGP_LPJ_G0025661.1 mouse_genomes_project 2 51134150 51163325 - MGP_LPJ_P0054601 Nmi protein_coding protein_coding MGP_LPJ_T0054602.1 MGP_LPJ_G0025661.1 mouse_genomes_project 2 51134170 51138223 - MGP_LPJ_P0054602 Nmi protein_coding protein_coding MGP_LPJ_T0054603.1 MGP_LPJ_G0025661.1 mouse_genomes_project 2 51141514 51163803 - MGP_LPJ_P0054603 Nmi protein_coding protein_coding MGP_LPJ_T0054604.1 MGP_LPJ_G0025661.1 mouse_genomes_project 2 51145706 51163279 - Nmi protein_coding retained_intron MGP_LPJ_T0053054.1 MGP_LPJ_G0025385.1 mouse_genomes_project 2 23395897 23400133 + MGP_LPJ_P0053054 Edf1 protein_coding protein_coding MGP_LPJ_T0053055.1 MGP_LPJ_G0025385.1 mouse_genomes_project 2 23395921 23399412 + Edf1 protein_coding processed_transcript MGP_LPJ_T0053056.1 MGP_LPJ_G0025385.1 mouse_genomes_project 2 23395947 23399315 + Edf1 protein_coding processed_transcript MGP_LPJ_T0053057.1 MGP_LPJ_G0025385.1 mouse_genomes_project 2 23396189 23399912 + Edf1 protein_coding processed_transcript MGP_LPJ_T0053058.1 MGP_LPJ_G0025385.1 mouse_genomes_project 2 23398635 23400133 + Edf1 protein_coding processed_transcript MGP_LPJ_T0102061.1 MGP_LPJ_G0040098.1 mouse_genomes_project 2 91890044 91893913 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0055587.1 MGP_LPJ_G0025872.1 mouse_genomes_project 2 86517092 86518028 - MGP_LPJ_P0055587 Olfr1012 protein_coding protein_coding MGP_LPJ_T0102038.1 MGP_LPJ_G0040075.1 mouse_genomes_project 2 87401531 87403068 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0007175.1 MGP_LPJ_G0005887.1 mouse_genomes_project 2 24073842 24078792 - Gm13553 lincRNA lincRNA MGP_LPJ_T0013639.1 MGP_LPJ_G0011730.1 mouse_genomes_project 2 97918464 97918624 + processed_pseudogene processed_pseudogene MGP_LPJ_T0055877.1 MGP_LPJ_G0026077.1 mouse_genomes_project 2 92543125 92554054 + MGP_LPJ_P0055877 Rapsn protein_coding protein_coding MGP_LPJ_T0055878.1 MGP_LPJ_G0026077.1 mouse_genomes_project 2 92543132 92554051 + MGP_LPJ_P0055878 Rapsn protein_coding protein_coding MGP_LPJ_T0055879.1 MGP_LPJ_G0026077.1 mouse_genomes_project 2 92543146 92554054 + MGP_LPJ_P0055879 Rapsn protein_coding protein_coding MGP_LPJ_T0055880.1 MGP_LPJ_G0026077.1 mouse_genomes_project 2 92551113 92553805 + Rapsn protein_coding retained_intron MGP_LPJ_T0013651.1 MGP_LPJ_G0011742.1 mouse_genomes_project 2 104235580 104236019 + processed_pseudogene processed_pseudogene MGP_LPJ_T0052892.1 MGP_LPJ_G0025357.1 mouse_genomes_project 2 23032322 23035274 - MGP_LPJ_P0052892 protein_coding protein_coding MGP_LPJ_T0052893.1 MGP_LPJ_G0025357.1 mouse_genomes_project 2 23034094 23035226 - protein_coding processed_transcript MGP_LPJ_T0057488.1 MGP_LPJ_G0026431.1 mouse_genomes_project 2 133692892 133734336 + MGP_LPJ_P0057488 Tgm3 protein_coding protein_coding MGP_LPJ_T0100591.1 MGP_LPJ_G0038854.1 mouse_genomes_project 2 62343981 62344117 - Gm22020 snoRNA snoRNA MGP_LPJ_T0055631.1 MGP_LPJ_G0025914.1 mouse_genomes_project 2 87479564 87572989 - MGP_LPJ_P0055631 Olfr1082 protein_coding protein_coding MGP_LPJ_T0004057.1 MGP_LPJ_G0003607.1 mouse_genomes_project 2 104817678 104826531 - Gm13872 antisense antisense MGP_LPJ_T0004058.1 MGP_LPJ_G0003607.1 mouse_genomes_project 2 104823422 104826518 - Gm13872 antisense antisense MGP_LPJ_T0004059.1 MGP_LPJ_G0003607.1 mouse_genomes_project 2 104824409 104826532 - Gm13872 antisense antisense MGP_LPJ_T0059787.1 MGP_LPJ_G0026966.1 mouse_genomes_project 2 188328671 188334169 - MGP_LPJ_P0059787 Rgs19 protein_coding protein_coding MGP_LPJ_T0059788.1 MGP_LPJ_G0026966.1 mouse_genomes_project 2 188328677 188329759 - MGP_LPJ_P0059788 Rgs19 protein_coding protein_coding MGP_LPJ_T0059789.1 MGP_LPJ_G0026966.1 mouse_genomes_project 2 188328680 188334179 - MGP_LPJ_P0059789 Rgs19 protein_coding protein_coding MGP_LPJ_T0059790.1 MGP_LPJ_G0026966.1 mouse_genomes_project 2 188328762 188332076 - MGP_LPJ_P0059790 Rgs19 protein_coding protein_coding MGP_LPJ_T0059791.1 MGP_LPJ_G0026966.1 mouse_genomes_project 2 188328765 188334189 - MGP_LPJ_P0059791 Rgs19 protein_coding protein_coding MGP_LPJ_T0059792.1 MGP_LPJ_G0026966.1 mouse_genomes_project 2 188329593 188333890 - Rgs19 protein_coding processed_transcript MGP_LPJ_T0059793.1 MGP_LPJ_G0026966.1 mouse_genomes_project 2 188329678 188334208 - Rgs19 protein_coding processed_transcript MGP_LPJ_T0059794.1 MGP_LPJ_G0026966.1 mouse_genomes_project 2 188329920 188334166 - Rgs19 protein_coding processed_transcript MGP_LPJ_T0013369.1 MGP_LPJ_G0011460.1 mouse_genomes_project 2 509302 509618 + processed_pseudogene processed_pseudogene MGP_LPJ_T0057812.1 MGP_LPJ_G0026502.1 mouse_genomes_project 2 143716212 143807564 + MGP_LPJ_P0057812 Ism1 protein_coding protein_coding MGP_LPJ_T0057813.1 MGP_LPJ_G0026502.1 mouse_genomes_project 2 143716212 143807565 + MGP_LPJ_P0057813 Ism1 protein_coding protein_coding MGP_LPJ_T0055693.1 MGP_LPJ_G0025966.1 mouse_genomes_project 2 88916392 88917337 + MGP_LPJ_P0055693 Olfr1143 protein_coding protein_coding MGP_LPJ_T0007220.1 MGP_LPJ_G0005922.1 mouse_genomes_project 2 54760938 54765279 - Gm26794 lincRNA lincRNA MGP_LPJ_T0100597.1 MGP_LPJ_G0038860.1 mouse_genomes_project 2 93159328 93159439 + Snord67 snoRNA snoRNA MGP_LPJ_T0058809.1 MGP_LPJ_G0026739.1 mouse_genomes_project 2 165865227 165920297 - MGP_LPJ_P0058809 protein_coding protein_coding MGP_LPJ_T0057922.1 MGP_LPJ_G0026530.1 mouse_genomes_project 2 149464577 149964426 + MGP_LPJ_P0057922 Slc24a3 protein_coding protein_coding MGP_LPJ_T0057923.1 MGP_LPJ_G0026530.1 mouse_genomes_project 2 149464742 149826818 + Slc24a3 protein_coding processed_transcript MGP_LPJ_T0057924.1 MGP_LPJ_G0026530.1 mouse_genomes_project 2 149541582 149964426 + Slc24a3 protein_coding processed_transcript MGP_LPJ_T0057925.1 MGP_LPJ_G0026530.1 mouse_genomes_project 2 149541593 149962616 + MGP_LPJ_P0057925 Slc24a3 protein_coding protein_coding MGP_LPJ_T0057926.1 MGP_LPJ_G0026530.1 mouse_genomes_project 2 149928311 149935699 + Slc24a3 protein_coding processed_transcript MGP_LPJ_T0056963.1 MGP_LPJ_G0026312.1 mouse_genomes_project 2 124113768 124145511 + MGP_LPJ_P0056963 Tmem62 protein_coding nonsense_mediated_decay MGP_LPJ_T0056964.1 MGP_LPJ_G0026312.1 mouse_genomes_project 2 124114050 124145503 + MGP_LPJ_P0056964 Tmem62 protein_coding protein_coding MGP_LPJ_T0056965.1 MGP_LPJ_G0026312.1 mouse_genomes_project 2 124114421 124117273 + Tmem62 protein_coding retained_intron MGP_LPJ_T0056966.1 MGP_LPJ_G0026312.1 mouse_genomes_project 2 124117735 124128081 + Tmem62 protein_coding processed_transcript MGP_LPJ_T0056967.1 MGP_LPJ_G0026312.1 mouse_genomes_project 2 124121025 124123615 + Tmem62 protein_coding processed_transcript MGP_LPJ_T0056968.1 MGP_LPJ_G0026312.1 mouse_genomes_project 2 124133986 124144702 + Tmem62 protein_coding retained_intron MGP_LPJ_T0055501.1 MGP_LPJ_G0025838.1 mouse_genomes_project 2 85222242 85226833 + MGP_LPJ_P0055501 Ypel4 protein_coding protein_coding MGP_LPJ_T0055502.1 MGP_LPJ_G0025838.1 mouse_genomes_project 2 85222282 85226833 + MGP_LPJ_P0055502 Ypel4 protein_coding nonsense_mediated_decay MGP_LPJ_T0055503.1 MGP_LPJ_G0025838.1 mouse_genomes_project 2 85222307 85223803 + Ypel4 protein_coding processed_transcript MGP_LPJ_T0055504.1 MGP_LPJ_G0025838.1 mouse_genomes_project 2 85222411 85226827 + Ypel4 protein_coding retained_intron MGP_LPJ_T0053856.1 MGP_LPJ_G0025524.1 mouse_genomes_project 2 30235680 30258884 + MGP_LPJ_P0053856 Aif1l protein_coding protein_coding MGP_LPJ_T0053857.1 MGP_LPJ_G0025524.1 mouse_genomes_project 2 30235815 30255189 + MGP_LPJ_P0053857 Aif1l protein_coding protein_coding MGP_LPJ_T0053858.1 MGP_LPJ_G0025524.1 mouse_genomes_project 2 30235875 30256674 + MGP_LPJ_P0053858 Aif1l protein_coding protein_coding MGP_LPJ_T0053859.1 MGP_LPJ_G0025524.1 mouse_genomes_project 2 30236004 30255192 + Aif1l protein_coding retained_intron MGP_LPJ_T0053860.1 MGP_LPJ_G0025524.1 mouse_genomes_project 2 30236058 30256780 + Aif1l protein_coding retained_intron MGP_LPJ_T0053861.1 MGP_LPJ_G0025524.1 mouse_genomes_project 2 30245875 30256466 + Aif1l protein_coding processed_transcript MGP_LPJ_T0053862.1 MGP_LPJ_G0025524.1 mouse_genomes_project 2 30246856 30255188 + Aif1l protein_coding processed_transcript MGP_LPJ_T0053863.1 MGP_LPJ_G0025524.1 mouse_genomes_project 2 30247446 30256390 + Aif1l protein_coding retained_intron MGP_LPJ_T0053864.1 MGP_LPJ_G0025524.1 mouse_genomes_project 2 30248806 30256437 + Aif1l protein_coding processed_transcript MGP_LPJ_T0053865.1 MGP_LPJ_G0025524.1 mouse_genomes_project 2 30254761 30256597 + Aif1l protein_coding retained_intron MGP_LPJ_T0102057.1 MGP_LPJ_G0040094.1 mouse_genomes_project 2 91590479 91591519 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0017869.1 MGP_LPJ_G0015411.1 mouse_genomes_project 2 179203073 179203526 - Gm20490 processed_transcript processed_transcript MGP_LPJ_T0056245.1 MGP_LPJ_G0026135.1 mouse_genomes_project 2 104522344 104525730 - MGP_LPJ_P0056245 Fjx1 protein_coding protein_coding MGP_LPJ_T0013767.1 MGP_LPJ_G0011858.1 mouse_genomes_project 2 152071614 152071944 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007344.1 MGP_LPJ_G0006023.1 mouse_genomes_project 2 136419349 136495266 + AU019990 lincRNA lincRNA MGP_LPJ_T0007345.1 MGP_LPJ_G0006023.1 mouse_genomes_project 2 136419349 136498132 + AU019990 lincRNA lincRNA MGP_LPJ_T0053672.1 MGP_LPJ_G0025497.1 mouse_genomes_project 2 28495170 28518754 + MGP_LPJ_P0053672 Fam73b protein_coding protein_coding MGP_LPJ_T0053673.1 MGP_LPJ_G0025497.1 mouse_genomes_project 2 28495182 28499647 + Fam73b protein_coding processed_transcript MGP_LPJ_T0053674.1 MGP_LPJ_G0025497.1 mouse_genomes_project 2 28495191 28510035 + MGP_LPJ_P0053674 Fam73b protein_coding protein_coding MGP_LPJ_T0053675.1 MGP_LPJ_G0025497.1 mouse_genomes_project 2 28495203 28500254 + Fam73b protein_coding retained_intron MGP_LPJ_T0053676.1 MGP_LPJ_G0025497.1 mouse_genomes_project 2 28495230 28501355 + MGP_LPJ_P0053676 Fam73b protein_coding protein_coding MGP_LPJ_T0053677.1 MGP_LPJ_G0025497.1 mouse_genomes_project 2 28495233 28518752 + MGP_LPJ_P0053677 Fam73b protein_coding protein_coding MGP_LPJ_T0053678.1 MGP_LPJ_G0025497.1 mouse_genomes_project 2 28498632 28500255 + Fam73b protein_coding retained_intron MGP_LPJ_T0053679.1 MGP_LPJ_G0025497.1 mouse_genomes_project 2 28499364 28502152 + MGP_LPJ_P0053679 Fam73b protein_coding protein_coding MGP_LPJ_T0053680.1 MGP_LPJ_G0025497.1 mouse_genomes_project 2 28502231 28507600 + Fam73b protein_coding retained_intron MGP_LPJ_T0053681.1 MGP_LPJ_G0025497.1 mouse_genomes_project 2 28509175 28515240 + Fam73b protein_coding retained_intron MGP_LPJ_T0053682.1 MGP_LPJ_G0025497.1 mouse_genomes_project 2 28514945 28517333 + MGP_LPJ_P0053682 Fam73b protein_coding protein_coding MGP_LPJ_T0053683.1 MGP_LPJ_G0025497.1 mouse_genomes_project 2 28515176 28517439 + MGP_LPJ_P0053683 Fam73b protein_coding protein_coding MGP_LPJ_T0013551.1 MGP_LPJ_G0011642.1 mouse_genomes_project 2 69577554 69577987 - processed_pseudogene processed_pseudogene MGP_LPJ_T0056440.1 MGP_LPJ_G0026173.1 mouse_genomes_project 2 109098297 109281270 + MGP_LPJ_P0056440 Mpped2 protein_coding protein_coding MGP_LPJ_T0056441.1 MGP_LPJ_G0026173.1 mouse_genomes_project 2 109100249 109152517 + MGP_LPJ_P0056441 Mpped2 protein_coding protein_coding MGP_LPJ_T0056442.1 MGP_LPJ_G0026173.1 mouse_genomes_project 2 109100630 109280120 + MGP_LPJ_P0056442 Mpped2 protein_coding protein_coding MGP_LPJ_T0056443.1 MGP_LPJ_G0026173.1 mouse_genomes_project 2 109100652 109192285 + Mpped2 protein_coding processed_transcript MGP_LPJ_T0056444.1 MGP_LPJ_G0026173.1 mouse_genomes_project 2 109100883 109279949 + MGP_LPJ_P0056444 Mpped2 protein_coding protein_coding MGP_LPJ_T0056445.1 MGP_LPJ_G0026173.1 mouse_genomes_project 2 109138153 109192404 + Mpped2 protein_coding processed_transcript MGP_LPJ_T0001121.1 MGP_LPJ_G0001046.1 mouse_genomes_project 2 86419074 86420571 - TEC TEC MGP_LPJ_T0059464.1 MGP_LPJ_G0026903.1 mouse_genomes_project 2 180733222 180736258 - MGP_LPJ_P0059464 Atp5e protein_coding protein_coding MGP_LPJ_T0059465.1 MGP_LPJ_G0026903.1 mouse_genomes_project 2 180733225 180736202 - Atp5e protein_coding retained_intron MGP_LPJ_T0059466.1 MGP_LPJ_G0026903.1 mouse_genomes_project 2 180734671 180736242 - Atp5e protein_coding retained_intron MGP_LPJ_T0052876.1 MGP_LPJ_G0025354.1 mouse_genomes_project 2 23009890 23021668 - MGP_LPJ_P0052876 Nelfb protein_coding protein_coding MGP_LPJ_T0052877.1 MGP_LPJ_G0025354.1 mouse_genomes_project 2 23009891 23021668 - MGP_LPJ_P0052877 Nelfb protein_coding protein_coding MGP_LPJ_T0052878.1 MGP_LPJ_G0025354.1 mouse_genomes_project 2 23009894 23021560 - Nelfb protein_coding retained_intron MGP_LPJ_T0052879.1 MGP_LPJ_G0025354.1 mouse_genomes_project 2 23010216 23013972 - Nelfb protein_coding retained_intron MGP_LPJ_T0052880.1 MGP_LPJ_G0025354.1 mouse_genomes_project 2 23010863 23014100 - MGP_LPJ_P0052880 Nelfb protein_coding protein_coding MGP_LPJ_T0052881.1 MGP_LPJ_G0025354.1 mouse_genomes_project 2 23011332 23013780 - Nelfb protein_coding retained_intron MGP_LPJ_T0052882.1 MGP_LPJ_G0025354.1 mouse_genomes_project 2 23014069 23020905 - MGP_LPJ_P0052882 Nelfb protein_coding protein_coding MGP_LPJ_T0052883.1 MGP_LPJ_G0025354.1 mouse_genomes_project 2 23014129 23020253 - Nelfb protein_coding processed_transcript MGP_LPJ_T0052884.1 MGP_LPJ_G0025354.1 mouse_genomes_project 2 23015345 23020879 - Nelfb protein_coding retained_intron MGP_LPJ_T0054605.1 MGP_LPJ_G0025662.1 mouse_genomes_project 2 51238294 51257085 + MGP_LPJ_P0054605 Tnfaip6 protein_coding protein_coding MGP_LPJ_T0057934.1 MGP_LPJ_G0026532.1 mouse_genomes_project 2 150262756 150276882 + MGP_LPJ_P0057934 Naa20 protein_coding protein_coding MGP_LPJ_T0057935.1 MGP_LPJ_G0026532.1 mouse_genomes_project 2 150262768 150276153 + MGP_LPJ_P0057935 Naa20 protein_coding nonsense_mediated_decay MGP_LPJ_T0057936.1 MGP_LPJ_G0026532.1 mouse_genomes_project 2 150262772 150276159 + MGP_LPJ_P0057936 Naa20 protein_coding protein_coding MGP_LPJ_T0057937.1 MGP_LPJ_G0026532.1 mouse_genomes_project 2 150262777 150276233 + MGP_LPJ_P0057937 Naa20 protein_coding nonsense_mediated_decay MGP_LPJ_T0057938.1 MGP_LPJ_G0026532.1 mouse_genomes_project 2 150262792 150276491 + MGP_LPJ_P0057938 Naa20 protein_coding protein_coding MGP_LPJ_T0057939.1 MGP_LPJ_G0026532.1 mouse_genomes_project 2 150262809 150271006 + MGP_LPJ_P0057939 Naa20 protein_coding protein_coding MGP_LPJ_T0057940.1 MGP_LPJ_G0026532.1 mouse_genomes_project 2 150262812 150272600 + Naa20 protein_coding retained_intron MGP_LPJ_T0057941.1 MGP_LPJ_G0026532.1 mouse_genomes_project 2 150272501 150276336 + Naa20 protein_coding retained_intron MGP_LPJ_T0004094.1 MGP_LPJ_G0003632.1 mouse_genomes_project 2 132332037 132334472 - Gm14011 antisense antisense MGP_LPJ_T0055645.1 MGP_LPJ_G0025928.1 mouse_genomes_project 2 87977748 87978681 - MGP_LPJ_P0055645 Olfr1101 protein_coding protein_coding MGP_LPJ_T0055336.1 MGP_LPJ_G0025805.1 mouse_genomes_project 2 77732468 78047713 - MGP_LPJ_P0055336 Zfp385b protein_coding protein_coding MGP_LPJ_T0055337.1 MGP_LPJ_G0025805.1 mouse_genomes_project 2 77732468 77844319 - MGP_LPJ_P0055337 Zfp385b protein_coding protein_coding MGP_LPJ_T0055338.1 MGP_LPJ_G0025805.1 mouse_genomes_project 2 77732468 78030902 - MGP_LPJ_P0055338 Zfp385b protein_coding protein_coding MGP_LPJ_T0055339.1 MGP_LPJ_G0025805.1 mouse_genomes_project 2 77732934 78145490 - MGP_LPJ_P0055339 Zfp385b protein_coding protein_coding MGP_LPJ_T0055340.1 MGP_LPJ_G0025805.1 mouse_genomes_project 2 77737748 77844315 - Zfp385b protein_coding processed_transcript MGP_LPJ_T0055341.1 MGP_LPJ_G0025805.1 mouse_genomes_project 2 77773461 78030902 - Zfp385b protein_coding processed_transcript MGP_LPJ_T0055342.1 MGP_LPJ_G0025805.1 mouse_genomes_project 2 77795079 77844236 - Zfp385b protein_coding processed_transcript MGP_LPJ_T0055343.1 MGP_LPJ_G0025805.1 mouse_genomes_project 2 77826388 78031009 - Zfp385b protein_coding processed_transcript MGP_LPJ_T0055344.1 MGP_LPJ_G0025805.1 mouse_genomes_project 2 77851991 78145933 - MGP_LPJ_P0055344 Zfp385b protein_coding protein_coding MGP_LPJ_T0055345.1 MGP_LPJ_G0025805.1 mouse_genomes_project 2 77852742 77891921 - Zfp385b protein_coding processed_transcript MGP_LPJ_T0055346.1 MGP_LPJ_G0025805.1 mouse_genomes_project 2 78145910 78148289 - Zfp385b protein_coding processed_transcript MGP_LPJ_T0054486.1 MGP_LPJ_G0025646.1 mouse_genomes_project 2 42366126 42375197 + Kynu protein_coding processed_transcript MGP_LPJ_T0054487.1 MGP_LPJ_G0025646.1 mouse_genomes_project 2 42366126 42500991 + MGP_LPJ_P0054487 Kynu protein_coding protein_coding MGP_LPJ_T0054488.1 MGP_LPJ_G0025646.1 mouse_genomes_project 2 42366139 42498576 + MGP_LPJ_P0054488 Kynu protein_coding protein_coding MGP_LPJ_T0054489.1 MGP_LPJ_G0025646.1 mouse_genomes_project 2 42366151 42453314 + MGP_LPJ_P0054489 Kynu protein_coding protein_coding MGP_LPJ_T0054490.1 MGP_LPJ_G0025646.1 mouse_genomes_project 2 42413892 42420513 + Kynu protein_coding processed_transcript MGP_LPJ_T0054491.1 MGP_LPJ_G0025646.1 mouse_genomes_project 2 42486476 42499784 + Kynu protein_coding processed_transcript MGP_LPJ_T0059568.1 MGP_LPJ_G0026930.1 mouse_genomes_project 2 187136475 187164596 + MGP_LPJ_P0059568 Col9a3 protein_coding protein_coding MGP_LPJ_T0059569.1 MGP_LPJ_G0026930.1 mouse_genomes_project 2 187136907 187164592 + MGP_LPJ_P0059569 Col9a3 protein_coding protein_coding MGP_LPJ_T0059570.1 MGP_LPJ_G0026930.1 mouse_genomes_project 2 187137491 187146127 + Col9a3 protein_coding retained_intron MGP_LPJ_T0059571.1 MGP_LPJ_G0026930.1 mouse_genomes_project 2 187143534 187153769 + Col9a3 protein_coding retained_intron MGP_LPJ_T0059572.1 MGP_LPJ_G0026930.1 mouse_genomes_project 2 187154468 187163705 + Col9a3 protein_coding retained_intron MGP_LPJ_T0059573.1 MGP_LPJ_G0026930.1 mouse_genomes_project 2 187156621 187164009 + Col9a3 protein_coding retained_intron MGP_LPJ_T0007447.1 MGP_LPJ_G0006110.1 mouse_genomes_project 2 186892590 186907860 - B230312C02Rik lincRNA lincRNA MGP_LPJ_T0013404.1 MGP_LPJ_G0011495.1 mouse_genomes_project 2 14472147 14473158 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055619.1 MGP_LPJ_G0025903.1 mouse_genomes_project 2 87127202 87128144 - MGP_LPJ_P0055619 Olfr1053 protein_coding protein_coding MGP_LPJ_T0098229.1 MGP_LPJ_G0036510.1 mouse_genomes_project 2 75123256 75123356 - n-R5s198 rRNA rRNA MGP_LPJ_T0054474.1 MGP_LPJ_G0025645.1 mouse_genomes_project 2 39308367 39330856 - Lrp1b protein_coding processed_transcript MGP_LPJ_T0054475.1 MGP_LPJ_G0025645.1 mouse_genomes_project 2 39308369 41427578 - MGP_LPJ_P0054475 Lrp1b protein_coding protein_coding MGP_LPJ_T0054476.1 MGP_LPJ_G0025645.1 mouse_genomes_project 2 39308655 39346012 - MGP_LPJ_P0054476 Lrp1b protein_coding protein_coding MGP_LPJ_T0054477.1 MGP_LPJ_G0025645.1 mouse_genomes_project 2 39308655 39434566 - MGP_LPJ_P0054477 Lrp1b protein_coding protein_coding MGP_LPJ_T0054478.1 MGP_LPJ_G0025645.1 mouse_genomes_project 2 39315444 39376833 - MGP_LPJ_P0054478 Lrp1b protein_coding protein_coding MGP_LPJ_T0054479.1 MGP_LPJ_G0025645.1 mouse_genomes_project 2 39407848 39431542 - Lrp1b protein_coding retained_intron MGP_LPJ_T0054480.1 MGP_LPJ_G0025645.1 mouse_genomes_project 2 39529960 40532294 - MGP_LPJ_P0054480 Lrp1b protein_coding protein_coding MGP_LPJ_T0054481.1 MGP_LPJ_G0025645.1 mouse_genomes_project 2 40022507 41427010 - MGP_LPJ_P0054481 Lrp1b protein_coding protein_coding MGP_LPJ_T0054482.1 MGP_LPJ_G0025645.1 mouse_genomes_project 2 40243289 41427026 - Lrp1b protein_coding retained_intron MGP_LPJ_T0054483.1 MGP_LPJ_G0025645.1 mouse_genomes_project 2 40816325 41426879 - MGP_LPJ_P0054483 Lrp1b protein_coding protein_coding MGP_LPJ_T0054484.1 MGP_LPJ_G0025645.1 mouse_genomes_project 2 41082008 41427209 - Lrp1b protein_coding retained_intron MGP_LPJ_T0054485.1 MGP_LPJ_G0025645.1 mouse_genomes_project 2 41422751 41426968 - MGP_LPJ_P0054485 Lrp1b protein_coding protein_coding MGP_LPJ_T0010449.1 MGP_LPJ_G0008567.1 mouse_genomes_project 2 92947635 92947730 - Gm22071 miRNA miRNA MGP_LPJ_T0056366.1 MGP_LPJ_G0026158.1 mouse_genomes_project 2 106888332 106916743 - Tcp11l1 protein_coding processed_transcript MGP_LPJ_T0056369.1 MGP_LPJ_G0026158.1 mouse_genomes_project 2 106910459 106943426 - MGP_LPJ_P0056369 Tcp11l1 protein_coding protein_coding MGP_LPJ_T0056370.1 MGP_LPJ_G0026158.1 mouse_genomes_project 2 106912419 106943432 - MGP_LPJ_P0056370 Tcp11l1 protein_coding protein_coding MGP_LPJ_T0056371.1 MGP_LPJ_G0026158.1 mouse_genomes_project 2 106914206 106943283 - MGP_LPJ_P0056371 Tcp11l1 protein_coding unknown_likely_coding MGP_LPJ_T0056372.1 MGP_LPJ_G0026158.1 mouse_genomes_project 2 106917256 106943439 - Tcp11l1 protein_coding retained_intron MGP_LPJ_T0056373.1 MGP_LPJ_G0026158.1 mouse_genomes_project 2 106927050 106937698 - Tcp11l1 protein_coding processed_transcript MGP_LPJ_T0056374.1 MGP_LPJ_G0026158.1 mouse_genomes_project 2 106928596 106943363 - Tcp11l1 protein_coding processed_transcript MGP_LPJ_T0056375.1 MGP_LPJ_G0026158.1 mouse_genomes_project 2 106936057 106943436 - Tcp11l1 protein_coding processed_transcript MGP_LPJ_T0003929.1 MGP_LPJ_G0003516.1 mouse_genomes_project 2 23449452 23476907 + Fcnaos antisense antisense MGP_LPJ_T0003930.1 MGP_LPJ_G0003516.1 mouse_genomes_project 2 23457285 23476907 + Fcnaos antisense antisense MGP_LPJ_T0003931.1 MGP_LPJ_G0003516.1 mouse_genomes_project 2 23470231 23476908 + Fcnaos antisense antisense MGP_LPJ_T0003932.1 MGP_LPJ_G0003516.1 mouse_genomes_project 2 23475794 23476910 + Fcnaos antisense antisense MGP_LPJ_T0001096.1 MGP_LPJ_G0001021.1 mouse_genomes_project 2 34349716 34352731 - TEC TEC MGP_LPJ_T0007275.1 MGP_LPJ_G0005970.1 mouse_genomes_project 2 94394020 94412247 + Gm13816 lincRNA lincRNA MGP_LPJ_T0004145.1 MGP_LPJ_G0003667.1 mouse_genomes_project 2 157258802 157263035 - Gm14161 antisense antisense MGP_LPJ_T0007207.1 MGP_LPJ_G0005911.1 mouse_genomes_project 2 45356274 45384407 - Gm13470 lincRNA lincRNA MGP_LPJ_T0004160.1 MGP_LPJ_G0003681.1 mouse_genomes_project 2 163341200 163344951 + 1700060C20Rik antisense antisense MGP_LPJ_T0013461.1 MGP_LPJ_G0011552.1 mouse_genomes_project 2 36075276 36076046 + processed_pseudogene processed_pseudogene MGP_LPJ_T0053650.1 MGP_LPJ_G0025494.1 mouse_genomes_project 2 28411487 28413591 - MGP_LPJ_P0053650 Dolk protein_coding protein_coding MGP_LPJ_T0007201.1 MGP_LPJ_G0005906.1 mouse_genomes_project 2 44032518 44045661 + Gm28643 lincRNA lincRNA MGP_LPJ_T0013715.1 MGP_LPJ_G0011806.1 mouse_genomes_project 2 132548961 132549440 - processed_pseudogene processed_pseudogene MGP_LPJ_T0056671.1 MGP_LPJ_G0026255.1 mouse_genomes_project 2 121727379 121732240 - MGP_LPJ_P0056671 Ankrd63 protein_coding protein_coding MGP_LPJ_T0057489.1 MGP_LPJ_G0026432.1 mouse_genomes_project 2 133793154 133836353 + Tgm6 protein_coding processed_transcript MGP_LPJ_T0057490.1 MGP_LPJ_G0026432.1 mouse_genomes_project 2 133803713 133836353 + Tgm6 protein_coding processed_transcript MGP_LPJ_T0057491.1 MGP_LPJ_G0026432.1 mouse_genomes_project 2 133803713 133836353 + MGP_LPJ_P0057491 Tgm6 protein_coding protein_coding MGP_LPJ_T0057703.1 MGP_LPJ_G0026478.1 mouse_genomes_project 2 136035769 136090702 + MGP_LPJ_P0057703 Cds2 protein_coding protein_coding MGP_LPJ_T0057704.1 MGP_LPJ_G0026478.1 mouse_genomes_project 2 136035769 136074996 + MGP_LPJ_P0057704 Cds2 protein_coding protein_coding MGP_LPJ_T0057705.1 MGP_LPJ_G0026478.1 mouse_genomes_project 2 136035868 136076096 + MGP_LPJ_P0057705 Cds2 protein_coding nonsense_mediated_decay MGP_LPJ_T0057706.1 MGP_LPJ_G0026478.1 mouse_genomes_project 2 136060751 136074424 + MGP_LPJ_P0057706 Cds2 protein_coding protein_coding MGP_LPJ_T0057707.1 MGP_LPJ_G0026478.1 mouse_genomes_project 2 136061514 136090702 + MGP_LPJ_P0057707 Cds2 protein_coding protein_coding MGP_LPJ_T0057708.1 MGP_LPJ_G0026478.1 mouse_genomes_project 2 136080116 136084120 + MGP_LPJ_P0057708 Cds2 protein_coding protein_coding MGP_LPJ_T0058033.1 MGP_LPJ_G0026563.1 mouse_genomes_project 2 155158690 155167218 + MGP_LPJ_P0058033 Cst7 protein_coding protein_coding MGP_LPJ_T0052820.1 MGP_LPJ_G0025346.1 mouse_genomes_project 2 22751575 22761268 + MGP_LPJ_P0052820 Dph7 protein_coding protein_coding MGP_LPJ_T0052821.1 MGP_LPJ_G0025346.1 mouse_genomes_project 2 22751597 22761266 + MGP_LPJ_P0052821 Dph7 protein_coding nonsense_mediated_decay MGP_LPJ_T0052822.1 MGP_LPJ_G0025346.1 mouse_genomes_project 2 22751598 22758023 + MGP_LPJ_P0052822 Dph7 protein_coding nonsense_mediated_decay MGP_LPJ_T0052823.1 MGP_LPJ_G0025346.1 mouse_genomes_project 2 22751616 22755743 + MGP_LPJ_P0052823 Dph7 protein_coding nonsense_mediated_decay MGP_LPJ_T0052824.1 MGP_LPJ_G0025346.1 mouse_genomes_project 2 22751627 22755698 + MGP_LPJ_P0052824 Dph7 protein_coding nonsense_mediated_decay MGP_LPJ_T0052825.1 MGP_LPJ_G0025346.1 mouse_genomes_project 2 22751641 22761268 + Dph7 protein_coding retained_intron MGP_LPJ_T0052826.1 MGP_LPJ_G0025346.1 mouse_genomes_project 2 22751648 22758776 + MGP_LPJ_P0052826 Dph7 protein_coding nonsense_mediated_decay MGP_LPJ_T0058165.1 MGP_LPJ_G0026599.1 mouse_genomes_project 2 157192545 157197043 - MGP_LPJ_P0058165 Defb22 protein_coding protein_coding MGP_LPJ_T0056376.1 MGP_LPJ_G0026159.1 mouse_genomes_project 2 106945195 106947655 - MGP_LPJ_P0056376 Pin1rt1 protein_coding protein_coding MGP_LPJ_T0017835.1 MGP_LPJ_G0015396.1 mouse_genomes_project 2 161637701 161641903 - Gm14169 processed_transcript processed_transcript MGP_LPJ_T0017836.1 MGP_LPJ_G0015397.1 mouse_genomes_project 2 161753609 161759973 - 4930405A21Rik processed_transcript processed_transcript MGP_LPJ_T0017837.1 MGP_LPJ_G0015397.1 mouse_genomes_project 2 161755021 161759890 - 4930405A21Rik processed_transcript retained_intron MGP_LPJ_T0099361.1 MGP_LPJ_G0037624.1 mouse_genomes_project 2 144528266 144528373 - Gm23846 snRNA snRNA MGP_LPJ_T0053334.1 MGP_LPJ_G0025440.1 mouse_genomes_project 2 24996138 25026912 + MGP_LPJ_P0053334 Adamtsl2 protein_coding protein_coding MGP_LPJ_T0053335.1 MGP_LPJ_G0025440.1 mouse_genomes_project 2 25015170 25026906 + Adamtsl2 protein_coding retained_intron MGP_LPJ_T0053336.1 MGP_LPJ_G0025440.1 mouse_genomes_project 2 25015917 25016533 + Adamtsl2 protein_coding processed_transcript MGP_LPJ_T0053337.1 MGP_LPJ_G0025440.1 mouse_genomes_project 2 25021658 25025281 + Adamtsl2 protein_coding retained_intron MGP_LPJ_T0053338.1 MGP_LPJ_G0025440.1 mouse_genomes_project 2 25022535 25026912 + Adamtsl2 protein_coding retained_intron MGP_LPJ_T0053599.1 MGP_LPJ_G0025485.1 mouse_genomes_project 2 28218747 28246040 - MGP_LPJ_P0053599 Zer1 protein_coding protein_coding MGP_LPJ_T0053600.1 MGP_LPJ_G0025485.1 mouse_genomes_project 2 28218747 28245893 - MGP_LPJ_P0053600 Zer1 protein_coding protein_coding MGP_LPJ_T0053601.1 MGP_LPJ_G0025485.1 mouse_genomes_project 2 28221250 28223221 - Zer1 protein_coding retained_intron MGP_LPJ_T0053602.1 MGP_LPJ_G0025485.1 mouse_genomes_project 2 28221906 28224190 - Zer1 protein_coding retained_intron MGP_LPJ_T0053603.1 MGP_LPJ_G0025485.1 mouse_genomes_project 2 28226744 28246043 - Zer1 protein_coding retained_intron MGP_LPJ_T0053604.1 MGP_LPJ_G0025485.1 mouse_genomes_project 2 28227005 28246037 - Zer1 protein_coding retained_intron MGP_LPJ_T0053605.1 MGP_LPJ_G0025485.1 mouse_genomes_project 2 28228236 28232210 - Zer1 protein_coding retained_intron MGP_LPJ_T0053606.1 MGP_LPJ_G0025485.1 mouse_genomes_project 2 28228613 28229079 - Zer1 protein_coding processed_transcript MGP_LPJ_T0053607.1 MGP_LPJ_G0025485.1 mouse_genomes_project 2 28228951 28229979 - Zer1 protein_coding retained_intron MGP_LPJ_T0057647.1 MGP_LPJ_G0026467.1 mouse_genomes_project 2 135010489 135032301 + Pank2 protein_coding processed_transcript MGP_LPJ_T0057648.1 MGP_LPJ_G0026467.1 mouse_genomes_project 2 135010494 135051034 + MGP_LPJ_P0057648 Pank2 protein_coding protein_coding MGP_LPJ_T0057649.1 MGP_LPJ_G0026467.1 mouse_genomes_project 2 135010519 135046978 + MGP_LPJ_P0057649 Pank2 protein_coding nonsense_mediated_decay MGP_LPJ_T0057650.1 MGP_LPJ_G0026467.1 mouse_genomes_project 2 135010562 135051032 + MGP_LPJ_P0057650 Pank2 protein_coding nonsense_mediated_decay MGP_LPJ_T0057651.1 MGP_LPJ_G0026467.1 mouse_genomes_project 2 135010790 135046821 + MGP_LPJ_P0057651 Pank2 protein_coding protein_coding MGP_LPJ_T0057652.1 MGP_LPJ_G0026467.1 mouse_genomes_project 2 135010833 135047181 + Pank2 protein_coding processed_transcript MGP_LPJ_T0057653.1 MGP_LPJ_G0026467.1 mouse_genomes_project 2 135022942 135044005 + MGP_LPJ_P0057653 Pank2 protein_coding nonsense_mediated_decay MGP_LPJ_T0057654.1 MGP_LPJ_G0026467.1 mouse_genomes_project 2 135023050 135046798 + MGP_LPJ_P0057654 Pank2 protein_coding nonsense_mediated_decay MGP_LPJ_T0059553.1 MGP_LPJ_G0026926.1 mouse_genomes_project 2 186978820 186997519 + MGP_LPJ_P0059553 Slco4a1 protein_coding protein_coding MGP_LPJ_T0059554.1 MGP_LPJ_G0026926.1 mouse_genomes_project 2 186978909 186997497 + Slco4a1 protein_coding processed_transcript MGP_LPJ_T0059555.1 MGP_LPJ_G0026926.1 mouse_genomes_project 2 186983569 186997519 + MGP_LPJ_P0059555 Slco4a1 protein_coding protein_coding MGP_LPJ_T0059556.1 MGP_LPJ_G0026926.1 mouse_genomes_project 2 186989675 186990998 + Slco4a1 protein_coding retained_intron MGP_LPJ_T0059557.1 MGP_LPJ_G0026926.1 mouse_genomes_project 2 186995054 186997504 + Slco4a1 protein_coding retained_intron MGP_LPJ_T0007195.1 MGP_LPJ_G0005902.1 mouse_genomes_project 2 34078601 34081161 + Gm35202 lincRNA lincRNA MGP_LPJ_T0013843.1 MGP_LPJ_G0011934.1 mouse_genomes_project 2 188366112 188367013 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001073.1 MGP_LPJ_G0000998.1 mouse_genomes_project 2 10633404 10635093 - TEC TEC MGP_LPJ_T0055184.1 MGP_LPJ_G0025770.1 mouse_genomes_project 2 73582089 73605278 - MGP_LPJ_P0055184 protein_coding unknown_likely_coding MGP_LPJ_T0055185.1 MGP_LPJ_G0025770.1 mouse_genomes_project 2 73588049 73638271 - MGP_LPJ_P0055185 protein_coding protein_coding MGP_LPJ_T0055186.1 MGP_LPJ_G0025770.1 mouse_genomes_project 2 73595025 73603178 - MGP_LPJ_P0055186 protein_coding protein_coding MGP_LPJ_T0055187.1 MGP_LPJ_G0025770.1 mouse_genomes_project 2 73595085 73684286 - protein_coding processed_transcript MGP_LPJ_T0055188.1 MGP_LPJ_G0025770.1 mouse_genomes_project 2 73598495 73684189 - protein_coding processed_transcript MGP_LPJ_T0052411.1 MGP_LPJ_G0025277.1 mouse_genomes_project 2 9006102 9076247 + MGP_LPJ_P0052411 protein_coding protein_coding MGP_LPJ_T0052413.1 MGP_LPJ_G0025277.1 mouse_genomes_project 2 9039716 9076623 + protein_coding processed_transcript MGP_LPJ_T0052414.1 MGP_LPJ_G0025277.1 mouse_genomes_project 2 9039762 9061781 + protein_coding retained_intron MGP_LPJ_T0052415.1 MGP_LPJ_G0025277.1 mouse_genomes_project 2 9039774 9076966 + protein_coding processed_transcript MGP_LPJ_T0052416.1 MGP_LPJ_G0025277.1 mouse_genomes_project 2 9039830 9076980 + MGP_LPJ_P0052416 protein_coding protein_coding MGP_LPJ_T0052417.1 MGP_LPJ_G0025277.1 mouse_genomes_project 2 9039939 9076399 + protein_coding processed_transcript MGP_LPJ_T0052418.1 MGP_LPJ_G0025277.1 mouse_genomes_project 2 9040099 9063320 + MGP_LPJ_P0052418 protein_coding protein_coding MGP_LPJ_T0052419.1 MGP_LPJ_G0025277.1 mouse_genomes_project 2 9040146 9063607 + protein_coding retained_intron MGP_LPJ_T0052420.1 MGP_LPJ_G0025277.1 mouse_genomes_project 2 9040164 9076984 + MGP_LPJ_P0052420 protein_coding protein_coding MGP_LPJ_T0052421.1 MGP_LPJ_G0025277.1 mouse_genomes_project 2 9040197 9077315 + MGP_LPJ_P0052421 protein_coding protein_coding MGP_LPJ_T0052422.1 MGP_LPJ_G0025277.1 mouse_genomes_project 2 9040197 9076399 + MGP_LPJ_P0052422 protein_coding protein_coding MGP_LPJ_T0052423.1 MGP_LPJ_G0025277.1 mouse_genomes_project 2 9040198 9076399 + MGP_LPJ_P0052423 protein_coding protein_coding MGP_LPJ_T0052424.1 MGP_LPJ_G0025277.1 mouse_genomes_project 2 9040235 9076247 + MGP_LPJ_P0052424 protein_coding protein_coding MGP_LPJ_T0052425.1 MGP_LPJ_G0025277.1 mouse_genomes_project 2 9061541 9063501 + protein_coding retained_intron MGP_LPJ_T0052426.1 MGP_LPJ_G0025277.1 mouse_genomes_project 2 9061645 9076415 + MGP_LPJ_P0052426 protein_coding protein_coding MGP_LPJ_T0052427.1 MGP_LPJ_G0025277.1 mouse_genomes_project 2 9066378 9076966 + protein_coding retained_intron MGP_LPJ_T0013378.1 MGP_LPJ_G0011469.1 mouse_genomes_project 2 2242200 2243025 + processed_pseudogene processed_pseudogene MGP_LPJ_T0054688.1 MGP_LPJ_G0025680.1 mouse_genomes_project 2 57799504 57934230 - Acvr1 protein_coding processed_transcript MGP_LPJ_T0054689.1 MGP_LPJ_G0025680.1 mouse_genomes_project 2 57862915 57946254 - MGP_LPJ_P0054689 Acvr1 protein_coding protein_coding MGP_LPJ_T0054690.1 MGP_LPJ_G0025680.1 mouse_genomes_project 2 57862924 57984785 - MGP_LPJ_P0054690 Acvr1 protein_coding protein_coding MGP_LPJ_T0054692.1 MGP_LPJ_G0025680.1 mouse_genomes_project 2 57895006 57956459 - MGP_LPJ_P0054692 Acvr1 protein_coding protein_coding MGP_LPJ_T0098375.1 MGP_LPJ_G0036656.1 mouse_genomes_project 2 135164991 135165293 - Gm22902 ribozyme ribozyme MGP_LPJ_T0056627.1 MGP_LPJ_G0026245.1 mouse_genomes_project 2 120205996 120216611 + Fam98b protein_coding retained_intron MGP_LPJ_T0056628.1 MGP_LPJ_G0026245.1 mouse_genomes_project 2 120205996 120228664 + MGP_LPJ_P0056628 Fam98b protein_coding protein_coding MGP_LPJ_T0056629.1 MGP_LPJ_G0026245.1 mouse_genomes_project 2 120215120 120216609 + Fam98b protein_coding processed_transcript MGP_LPJ_T0003965.1 MGP_LPJ_G0003542.1 mouse_genomes_project 2 31576565 31580634 + Gm13528 antisense antisense MGP_LPJ_T0055688.1 MGP_LPJ_G0025962.1 mouse_genomes_project 2 88857432 88858368 - MGP_LPJ_P0055688 Olfr1138 protein_coding protein_coding MGP_LPJ_T0055653.1 MGP_LPJ_G0025936.1 mouse_genomes_project 2 88143084 88144023 - MGP_LPJ_P0055653 Olfr1110 protein_coding protein_coding MGP_LPJ_T0056759.1 MGP_LPJ_G0026277.1 mouse_genomes_project 2 122392151 122402140 + MGP_LPJ_P0056759 Dll4 protein_coding protein_coding MGP_LPJ_T0056760.1 MGP_LPJ_G0026277.1 mouse_genomes_project 2 122394742 122398497 + Dll4 protein_coding processed_transcript MGP_LPJ_T0058654.1 MGP_LPJ_G0026704.1 mouse_genomes_project 2 161818214 161825209 + MGP_LPJ_P0058654 Myl9 protein_coding protein_coding MGP_LPJ_T0058655.1 MGP_LPJ_G0026704.1 mouse_genomes_project 2 161818248 161824912 + Myl9 protein_coding processed_transcript MGP_LPJ_T0058656.1 MGP_LPJ_G0026704.1 mouse_genomes_project 2 161818251 161824085 + Myl9 protein_coding processed_transcript MGP_LPJ_T0058657.1 MGP_LPJ_G0026704.1 mouse_genomes_project 2 161822067 161824715 + Myl9 protein_coding processed_transcript MGP_LPJ_T0013753.1 MGP_LPJ_G0011844.1 mouse_genomes_project 2 148100859 148101192 + processed_pseudogene processed_pseudogene MGP_LPJ_T0055738.1 MGP_LPJ_G0026009.1 mouse_genomes_project 2 90145587 90146517 + MGP_LPJ_P0055738 Olfr1204 protein_coding protein_coding MGP_LPJ_T0013632.1 MGP_LPJ_G0011723.1 mouse_genomes_project 2 94197379 94197791 + processed_pseudogene processed_pseudogene MGP_LPJ_T0055663.1 MGP_LPJ_G0025946.1 mouse_genomes_project 2 88481279 88482251 + MGP_LPJ_P0055663 Olfr1123 protein_coding protein_coding MGP_LPJ_T0099339.1 MGP_LPJ_G0037602.1 mouse_genomes_project 2 81485552 81485659 - Gm23452 snRNA snRNA MGP_LPJ_T0058873.1 MGP_LPJ_G0026751.1 mouse_genomes_project 2 168448789 168478691 + MGP_LPJ_P0058873 Ift52 protein_coding protein_coding MGP_LPJ_T0058874.1 MGP_LPJ_G0026751.1 mouse_genomes_project 2 168448926 168464453 + MGP_LPJ_P0058874 Ift52 protein_coding protein_coding MGP_LPJ_T0058875.1 MGP_LPJ_G0026751.1 mouse_genomes_project 2 168448954 168454956 + Ift52 protein_coding processed_transcript MGP_LPJ_T0058876.1 MGP_LPJ_G0026751.1 mouse_genomes_project 2 168453857 168461625 + Ift52 protein_coding processed_transcript MGP_LPJ_T0052906.1 MGP_LPJ_G0025361.1 mouse_genomes_project 2 23053105 23054248 + MGP_LPJ_P0052906 Rnf208 protein_coding protein_coding MGP_LPJ_T0052907.1 MGP_LPJ_G0025361.1 mouse_genomes_project 2 23053184 23055112 + MGP_LPJ_P0052907 Rnf208 protein_coding protein_coding MGP_LPJ_T0052908.1 MGP_LPJ_G0025361.1 mouse_genomes_project 2 23053788 23055113 + MGP_LPJ_P0052908 Rnf208 protein_coding protein_coding MGP_LPJ_T0059422.1 MGP_LPJ_G0026894.1 mouse_genomes_project 2 179940129 179942810 + MGP_LPJ_P0059422 1700010B08Rik protein_coding protein_coding MGP_LPJ_T0013521.1 MGP_LPJ_G0011612.1 mouse_genomes_project 2 58161603 58162466 + processed_pseudogene processed_pseudogene MGP_LPJ_T0052226.1 MGP_LPJ_G0025244.1 mouse_genomes_project 2 1653579 1689927 - MGP_LPJ_P0052226 Prpf18 protein_coding protein_coding MGP_LPJ_T0052227.1 MGP_LPJ_G0025244.1 mouse_genomes_project 2 1653745 1689822 - MGP_LPJ_P0052227 Prpf18 protein_coding unknown_likely_coding MGP_LPJ_T0052228.1 MGP_LPJ_G0025244.1 mouse_genomes_project 2 1655455 1689947 - Prpf18 protein_coding processed_transcript MGP_LPJ_T0052229.1 MGP_LPJ_G0025244.1 mouse_genomes_project 2 1655546 1689954 - MGP_LPJ_P0052229 Prpf18 protein_coding protein_coding MGP_LPJ_T0052230.1 MGP_LPJ_G0025244.1 mouse_genomes_project 2 1671367 1689922 - MGP_LPJ_P0052230 Prpf18 protein_coding protein_coding MGP_LPJ_T0052231.1 MGP_LPJ_G0025244.1 mouse_genomes_project 2 1671391 1689928 - Prpf18 protein_coding processed_transcript MGP_LPJ_T0052232.1 MGP_LPJ_G0025244.1 mouse_genomes_project 2 1681214 1689944 - Prpf18 protein_coding processed_transcript MGP_LPJ_T0058915.1 MGP_LPJ_G0026762.1 mouse_genomes_project 2 169104128 169126773 - MGP_LPJ_P0058915 Serinc3 protein_coding protein_coding MGP_LPJ_T0058916.1 MGP_LPJ_G0026762.1 mouse_genomes_project 2 169118719 169126767 - Serinc3 protein_coding processed_transcript MGP_LPJ_T0004122.1 MGP_LPJ_G0003649.1 mouse_genomes_project 2 145349053 145355078 - Macrod2os2 antisense antisense MGP_LPJ_T0004124.1 MGP_LPJ_G0003649.1 mouse_genomes_project 2 145351367 145351754 - Macrod2os2 antisense antisense MGP_LPJ_T0013786.1 MGP_LPJ_G0011877.1 mouse_genomes_project 2 159603073 159603294 - processed_pseudogene processed_pseudogene MGP_LPJ_T0056791.1 MGP_LPJ_G0026288.1 mouse_genomes_project 2 122858625 122882037 - MGP_LPJ_P0056791 Rpap1 protein_coding protein_coding MGP_LPJ_T0056792.1 MGP_LPJ_G0026288.1 mouse_genomes_project 2 122859279 122882061 - MGP_LPJ_P0056792 Rpap1 protein_coding protein_coding MGP_LPJ_T0056793.1 MGP_LPJ_G0026288.1 mouse_genomes_project 2 122859280 122882070 - MGP_LPJ_P0056793 Rpap1 protein_coding protein_coding MGP_LPJ_T0056794.1 MGP_LPJ_G0026288.1 mouse_genomes_project 2 122859283 122882033 - MGP_LPJ_P0056794 Rpap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0056795.1 MGP_LPJ_G0026288.1 mouse_genomes_project 2 122859286 122882053 - MGP_LPJ_P0056795 Rpap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0056796.1 MGP_LPJ_G0026288.1 mouse_genomes_project 2 122861980 122882052 - Rpap1 protein_coding retained_intron MGP_LPJ_T0056797.1 MGP_LPJ_G0026288.1 mouse_genomes_project 2 122872685 122882047 - Rpap1 protein_coding retained_intron MGP_LPJ_T0056798.1 MGP_LPJ_G0026288.1 mouse_genomes_project 2 122872899 122875052 - Rpap1 protein_coding retained_intron MGP_LPJ_T0056799.1 MGP_LPJ_G0026288.1 mouse_genomes_project 2 122873242 122882062 - Rpap1 protein_coding processed_transcript MGP_LPJ_T0007281.1 MGP_LPJ_G0005973.1 mouse_genomes_project 2 95984910 96002038 - lincRNA lincRNA MGP_LPJ_T0007282.1 MGP_LPJ_G0005973.1 mouse_genomes_project 2 95993970 96002057 - lincRNA lincRNA MGP_LPJ_T0011537.1 MGP_LPJ_G0009655.1 mouse_genomes_project 2 172381035 172381382 + Gm25265 misc_RNA misc_RNA MGP_LPJ_T0001094.1 MGP_LPJ_G0001019.1 mouse_genomes_project 2 33838615 33840236 + TEC TEC MGP_LPJ_T0013386.1 MGP_LPJ_G0011477.1 mouse_genomes_project 2 6756029 6756537 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001078.1 MGP_LPJ_G0001003.1 mouse_genomes_project 2 12047280 12049901 + TEC TEC MGP_LPJ_T0059155.1 MGP_LPJ_G0026832.1 mouse_genomes_project 2 171400326 171512293 - MGP_LPJ_P0059155 Zmynd8 protein_coding protein_coding MGP_LPJ_T0059156.1 MGP_LPJ_G0026832.1 mouse_genomes_project 2 171400326 171482861 - MGP_LPJ_P0059156 Zmynd8 protein_coding protein_coding MGP_LPJ_T0059157.1 MGP_LPJ_G0026832.1 mouse_genomes_project 2 171400329 171509831 - MGP_LPJ_P0059157 Zmynd8 protein_coding protein_coding MGP_LPJ_T0059158.1 MGP_LPJ_G0026832.1 mouse_genomes_project 2 171400329 171509831 - MGP_LPJ_P0059158 Zmynd8 protein_coding protein_coding MGP_LPJ_T0059159.1 MGP_LPJ_G0026832.1 mouse_genomes_project 2 171401455 171512314 - MGP_LPJ_P0059159 Zmynd8 protein_coding protein_coding MGP_LPJ_T0059160.1 MGP_LPJ_G0026832.1 mouse_genomes_project 2 171401482 171512190 - Zmynd8 protein_coding processed_transcript MGP_LPJ_T0059161.1 MGP_LPJ_G0026832.1 mouse_genomes_project 2 171401482 171504516 - MGP_LPJ_P0059161 Zmynd8 protein_coding protein_coding MGP_LPJ_T0059162.1 MGP_LPJ_G0026832.1 mouse_genomes_project 2 171401695 171512416 - MGP_LPJ_P0059162 Zmynd8 protein_coding protein_coding MGP_LPJ_T0059163.1 MGP_LPJ_G0026832.1 mouse_genomes_project 2 171446169 171501865 - MGP_LPJ_P0059163 Zmynd8 protein_coding protein_coding MGP_LPJ_T0059164.1 MGP_LPJ_G0026832.1 mouse_genomes_project 2 171446224 171527309 - MGP_LPJ_P0059164 Zmynd8 protein_coding protein_coding MGP_LPJ_T0059165.1 MGP_LPJ_G0026832.1 mouse_genomes_project 2 171452198 171482861 - Zmynd8 protein_coding processed_transcript MGP_LPJ_T0059166.1 MGP_LPJ_G0026832.1 mouse_genomes_project 2 171462538 171529084 - MGP_LPJ_P0059166 Zmynd8 protein_coding protein_coding MGP_LPJ_T0059167.1 MGP_LPJ_G0026832.1 mouse_genomes_project 2 171465275 171486694 - Zmynd8 protein_coding processed_transcript MGP_LPJ_T0059168.1 MGP_LPJ_G0026832.1 mouse_genomes_project 2 171468237 171474608 - Zmynd8 protein_coding processed_transcript MGP_LPJ_T0059169.1 MGP_LPJ_G0026832.1 mouse_genomes_project 2 171474518 171502687 - Zmynd8 protein_coding processed_transcript MGP_LPJ_T0059170.1 MGP_LPJ_G0026832.1 mouse_genomes_project 2 171474518 171502495 - MGP_LPJ_P0059170 Zmynd8 protein_coding protein_coding MGP_LPJ_T0059171.1 MGP_LPJ_G0026832.1 mouse_genomes_project 2 171474519 171505932 - Zmynd8 protein_coding processed_transcript MGP_LPJ_T0059172.1 MGP_LPJ_G0026832.1 mouse_genomes_project 2 171499084 171511752 - Zmynd8 protein_coding processed_transcript MGP_LPJ_T0059173.1 MGP_LPJ_G0026832.1 mouse_genomes_project 2 171500958 171511781 - Zmynd8 protein_coding retained_intron MGP_LPJ_T0059174.1 MGP_LPJ_G0026832.1 mouse_genomes_project 2 171501236 171502278 - Zmynd8 protein_coding retained_intron MGP_LPJ_T0059175.1 MGP_LPJ_G0026832.1 mouse_genomes_project 2 171501344 171512293 - Zmynd8 protein_coding retained_intron MGP_LPJ_T0055652.1 MGP_LPJ_G0025935.1 mouse_genomes_project 2 88108400 88109339 - MGP_LPJ_P0055652 Olfr259 protein_coding protein_coding MGP_LPJ_T0013372.1 MGP_LPJ_G0011463.1 mouse_genomes_project 2 1058019 1059316 - processed_pseudogene processed_pseudogene MGP_LPJ_T0057080.1 MGP_LPJ_G0026329.1 mouse_genomes_project 2 124588473 124606960 - MGP_LPJ_P0057080 Serinc4 protein_coding nonsense_mediated_decay MGP_LPJ_T0057088.1 MGP_LPJ_G0026329.1 mouse_genomes_project 2 124602455 124607911 - MGP_LPJ_P0057088 Serinc4 protein_coding protein_coding MGP_LPJ_T0057089.1 MGP_LPJ_G0026329.1 mouse_genomes_project 2 124602455 124607823 - MGP_LPJ_P0057089 Serinc4 protein_coding protein_coding MGP_LPJ_T0057090.1 MGP_LPJ_G0026329.1 mouse_genomes_project 2 124602467 124606960 - MGP_LPJ_P0057090 Serinc4 protein_coding nonsense_mediated_decay MGP_LPJ_T0057091.1 MGP_LPJ_G0026329.1 mouse_genomes_project 2 124602525 124606954 - MGP_LPJ_P0057091 Serinc4 protein_coding nonsense_mediated_decay MGP_LPJ_T0057092.1 MGP_LPJ_G0026329.1 mouse_genomes_project 2 124603253 124604853 - Serinc4 protein_coding retained_intron MGP_LPJ_T0058718.1 MGP_LPJ_G0026719.1 mouse_genomes_project 2 162664536 162666875 + MGP_LPJ_P0058718 Nnat protein_coding protein_coding MGP_LPJ_T0058719.1 MGP_LPJ_G0026719.1 mouse_genomes_project 2 162664565 162666609 + MGP_LPJ_P0058719 Nnat protein_coding protein_coding MGP_LPJ_T0058720.1 MGP_LPJ_G0026719.1 mouse_genomes_project 2 162664568 162666893 + MGP_LPJ_P0058720 Nnat protein_coding protein_coding MGP_LPJ_T0058721.1 MGP_LPJ_G0026719.1 mouse_genomes_project 2 162664574 162666875 + MGP_LPJ_P0058721 Nnat protein_coding protein_coding MGP_LPJ_T0058722.1 MGP_LPJ_G0026719.1 mouse_genomes_project 2 162664579 162666363 + MGP_LPJ_P0058722 Nnat protein_coding protein_coding MGP_LPJ_T0058723.1 MGP_LPJ_G0026719.1 mouse_genomes_project 2 162664581 162665743 + MGP_LPJ_P0058723 Nnat protein_coding protein_coding MGP_LPJ_T0058724.1 MGP_LPJ_G0026719.1 mouse_genomes_project 2 162664582 162666153 + MGP_LPJ_P0058724 Nnat protein_coding protein_coding MGP_LPJ_T0058725.1 MGP_LPJ_G0026719.1 mouse_genomes_project 2 162664588 162666151 + MGP_LPJ_P0058725 Nnat protein_coding protein_coding MGP_LPJ_T0058726.1 MGP_LPJ_G0026719.1 mouse_genomes_project 2 162664598 162666888 + Nnat protein_coding retained_intron MGP_LPJ_T0058727.1 MGP_LPJ_G0026719.1 mouse_genomes_project 2 162665379 162666226 + Nnat protein_coding retained_intron MGP_LPJ_T0100602.1 MGP_LPJ_G0038865.1 mouse_genomes_project 2 99077934 99078063 - Gm23317 snoRNA snoRNA MGP_LPJ_T0057143.1 MGP_LPJ_G0026344.1 mouse_genomes_project 2 125395506 125421294 + MGP_LPJ_P0057143 Trim69 protein_coding protein_coding MGP_LPJ_T0057144.1 MGP_LPJ_G0026344.1 mouse_genomes_project 2 125395608 125421291 + Trim69 protein_coding processed_transcript MGP_LPJ_T0001080.1 MGP_LPJ_G0001005.1 mouse_genomes_project 2 12146218 12148892 + TEC TEC MGP_LPJ_T0010351.1 MGP_LPJ_G0008469.1 mouse_genomes_project 2 7724297 7724405 + Gm22677 miRNA miRNA MGP_LPJ_T0056349.1 MGP_LPJ_G0026155.1 mouse_genomes_project 2 106311256 106612573 - MGP_LPJ_P0056349 D430041D05Rik protein_coding protein_coding MGP_LPJ_T0056350.1 MGP_LPJ_G0026155.1 mouse_genomes_project 2 106315223 106402483 - D430041D05Rik protein_coding retained_intron MGP_LPJ_T0056351.1 MGP_LPJ_G0026155.1 mouse_genomes_project 2 106316954 106430763 - MGP_LPJ_P0056351 D430041D05Rik protein_coding protein_coding MGP_LPJ_T0056352.1 MGP_LPJ_G0026155.1 mouse_genomes_project 2 106320350 106327864 - D430041D05Rik protein_coding retained_intron MGP_LPJ_T0056353.1 MGP_LPJ_G0026155.1 mouse_genomes_project 2 106353989 106413092 - D430041D05Rik protein_coding retained_intron MGP_LPJ_T0056354.1 MGP_LPJ_G0026155.1 mouse_genomes_project 2 106378065 106429929 - D430041D05Rik protein_coding retained_intron MGP_LPJ_T0056355.1 MGP_LPJ_G0026155.1 mouse_genomes_project 2 106427066 106612231 - MGP_LPJ_P0056355 D430041D05Rik protein_coding protein_coding MGP_LPJ_T0056356.1 MGP_LPJ_G0026155.1 mouse_genomes_project 2 106427359 106612232 - MGP_LPJ_P0056356 D430041D05Rik protein_coding protein_coding MGP_LPJ_T0011507.1 MGP_LPJ_G0009625.1 mouse_genomes_project 2 32265817 32266187 + Nron misc_RNA misc_RNA MGP_LPJ_T0058996.1 MGP_LPJ_G0026792.1 mouse_genomes_project 2 170102351 170103489 + Wfdc2 protein_coding processed_transcript MGP_LPJ_T0058997.1 MGP_LPJ_G0026792.1 mouse_genomes_project 2 170102517 170108446 + MGP_LPJ_P0058997 Wfdc2 protein_coding protein_coding MGP_LPJ_T0058998.1 MGP_LPJ_G0026792.1 mouse_genomes_project 2 170102637 170108446 + MGP_LPJ_P0058998 Wfdc2 protein_coding protein_coding MGP_LPJ_T0058999.1 MGP_LPJ_G0026792.1 mouse_genomes_project 2 170102652 170108446 + MGP_LPJ_P0058999 Wfdc2 protein_coding protein_coding MGP_LPJ_T0059000.1 MGP_LPJ_G0026792.1 mouse_genomes_project 2 170102957 170104122 + MGP_LPJ_P0059000 Wfdc2 protein_coding protein_coding MGP_LPJ_T0056976.1 MGP_LPJ_G0026314.1 mouse_genomes_project 2 124156985 124177447 - MGP_LPJ_P0056976 Epb42 protein_coding protein_coding MGP_LPJ_T0056977.1 MGP_LPJ_G0026314.1 mouse_genomes_project 2 124157313 124167634 - Epb42 protein_coding processed_transcript MGP_LPJ_T0056978.1 MGP_LPJ_G0026314.1 mouse_genomes_project 2 124157313 124161897 - Epb42 protein_coding processed_transcript MGP_LPJ_T0056979.1 MGP_LPJ_G0026314.1 mouse_genomes_project 2 124158498 124161107 - Epb42 protein_coding retained_intron MGP_LPJ_T0056980.1 MGP_LPJ_G0026314.1 mouse_genomes_project 2 124162739 124177210 - MGP_LPJ_P0056980 Epb42 protein_coding protein_coding MGP_LPJ_T0056981.1 MGP_LPJ_G0026314.1 mouse_genomes_project 2 124168080 124177056 - Epb42 protein_coding processed_transcript MGP_LPJ_T0056982.1 MGP_LPJ_G0026314.1 mouse_genomes_project 2 124173777 124177120 - Epb42 protein_coding processed_transcript MGP_LPJ_T0058972.1 MGP_LPJ_G0026785.1 mouse_genomes_project 2 169925413 169936980 + Rbpjl protein_coding retained_intron MGP_LPJ_T0058973.1 MGP_LPJ_G0026785.1 mouse_genomes_project 2 169925466 169937637 + MGP_LPJ_P0058973 Rbpjl protein_coding protein_coding MGP_LPJ_T0058974.1 MGP_LPJ_G0026785.1 mouse_genomes_project 2 169925481 169933621 + Rbpjl protein_coding processed_transcript MGP_LPJ_T0013831.1 MGP_LPJ_G0011922.1 mouse_genomes_project 2 176991802 176992548 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055556.1 MGP_LPJ_G0025852.1 mouse_genomes_project 2 85628713 85632415 + MGP_LPJ_P0055556 Aplnr protein_coding protein_coding MGP_LPJ_T0055557.1 MGP_LPJ_G0025852.1 mouse_genomes_project 2 85629881 85632413 + MGP_LPJ_P0055557 Aplnr protein_coding protein_coding MGP_LPJ_T0056538.1 MGP_LPJ_G0026222.1 mouse_genomes_project 2 114990653 114991999 + MGP_LPJ_P0056538 Nop10 protein_coding protein_coding MGP_LPJ_T0054676.1 MGP_LPJ_G0025678.1 mouse_genomes_project 2 57528788 57563209 - MGP_LPJ_P0054676 Cytip protein_coding protein_coding MGP_LPJ_T0054677.1 MGP_LPJ_G0025678.1 mouse_genomes_project 2 57534689 57600238 - Cytip protein_coding processed_transcript MGP_LPJ_T0054678.1 MGP_LPJ_G0025678.1 mouse_genomes_project 2 57534774 57600248 - Cytip protein_coding processed_transcript MGP_LPJ_T0054679.1 MGP_LPJ_G0025678.1 mouse_genomes_project 2 57534906 57559511 - Cytip protein_coding processed_transcript MGP_LPJ_T0054680.1 MGP_LPJ_G0025678.1 mouse_genomes_project 2 57549935 57562833 - Cytip protein_coding processed_transcript MGP_LPJ_T0054681.1 MGP_LPJ_G0025678.1 mouse_genomes_project 2 57550110 57600249 - Cytip protein_coding processed_transcript MGP_LPJ_T0054682.1 MGP_LPJ_G0025678.1 mouse_genomes_project 2 57562689 57600253 - Cytip protein_coding processed_transcript MGP_LPJ_T0054683.1 MGP_LPJ_G0025678.1 mouse_genomes_project 2 57562750 57563371 - Cytip protein_coding processed_transcript MGP_LPJ_T0007396.1 MGP_LPJ_G0006066.1 mouse_genomes_project 2 168079026 168080101 + Gm14246 lincRNA lincRNA MGP_LPJ_T0010384.1 MGP_LPJ_G0008502.1 mouse_genomes_project 2 7786115 7786209 + Mir466n miRNA miRNA MGP_LPJ_T0058006.1 MGP_LPJ_G0026552.1 mouse_genomes_project 2 153276716 153280793 + MGP_LPJ_P0058006 Cst12 protein_coding protein_coding MGP_LPJ_T0058007.1 MGP_LPJ_G0026552.1 mouse_genomes_project 2 153276727 153280902 + MGP_LPJ_P0058007 Cst12 protein_coding protein_coding MGP_LPJ_T0007359.1 MGP_LPJ_G0006036.1 mouse_genomes_project 2 150921426 150924604 + 4933406D12Rik lincRNA lincRNA MGP_LPJ_T0007150.1 MGP_LPJ_G0005868.1 mouse_genomes_project 2 6772226 6781519 - Gm13218 lincRNA lincRNA MGP_LPJ_T0054254.1 MGP_LPJ_G0025581.1 mouse_genomes_project 2 33732086 33753481 - MGP_LPJ_P0054254 Rab14 protein_coding protein_coding MGP_LPJ_T0054255.1 MGP_LPJ_G0025581.1 mouse_genomes_project 2 33732086 33753481 - MGP_LPJ_P0054255 Rab14 protein_coding protein_coding MGP_LPJ_T0054256.1 MGP_LPJ_G0025581.1 mouse_genomes_project 2 33734489 33736411 - Rab14 protein_coding processed_transcript MGP_LPJ_T0054257.1 MGP_LPJ_G0025581.1 mouse_genomes_project 2 33735550 33736509 - Rab14 protein_coding processed_transcript MGP_LPJ_T0054258.1 MGP_LPJ_G0025581.1 mouse_genomes_project 2 33735963 33753333 - Rab14 protein_coding retained_intron MGP_LPJ_T0054259.1 MGP_LPJ_G0025581.1 mouse_genomes_project 2 33738645 33745024 - Rab14 protein_coding processed_transcript MGP_LPJ_T0054260.1 MGP_LPJ_G0025581.1 mouse_genomes_project 2 33740066 33743783 - Rab14 protein_coding retained_intron MGP_LPJ_T0054261.1 MGP_LPJ_G0025581.1 mouse_genomes_project 2 33742260 33753150 - Rab14 protein_coding processed_transcript MGP_LPJ_T0054262.1 MGP_LPJ_G0025581.1 mouse_genomes_project 2 33743881 33745204 - Rab14 protein_coding processed_transcript MGP_LPJ_T0054263.1 MGP_LPJ_G0025581.1 mouse_genomes_project 2 33748340 33753343 - Rab14 protein_coding retained_intron MGP_LPJ_T0054264.1 MGP_LPJ_G0025581.1 mouse_genomes_project 2 33752234 33753339 - Rab14 protein_coding processed_transcript MGP_LPJ_T0013518.1 MGP_LPJ_G0011609.1 mouse_genomes_project 2 56805217 56805760 - processed_pseudogene processed_pseudogene MGP_LPJ_T0058190.1 MGP_LPJ_G0026614.1 mouse_genomes_project 2 157518013 157569648 - MGP_LPJ_P0058190 Bcl2l1 protein_coding protein_coding MGP_LPJ_T0058191.1 MGP_LPJ_G0026614.1 mouse_genomes_project 2 157518017 157568586 - MGP_LPJ_P0058191 Bcl2l1 protein_coding protein_coding MGP_LPJ_T0058192.1 MGP_LPJ_G0026614.1 mouse_genomes_project 2 157518756 157566459 - Bcl2l1 protein_coding processed_transcript MGP_LPJ_T0058193.1 MGP_LPJ_G0026614.1 mouse_genomes_project 2 157566050 157568561 - MGP_LPJ_P0058193 Bcl2l1 protein_coding protein_coding MGP_LPJ_T0058194.1 MGP_LPJ_G0026614.1 mouse_genomes_project 2 157566285 157568234 - MGP_LPJ_P0058194 Bcl2l1 protein_coding protein_coding MGP_LPJ_T0058195.1 MGP_LPJ_G0026614.1 mouse_genomes_project 2 157567350 157569032 - MGP_LPJ_P0058195 Bcl2l1 protein_coding protein_coding MGP_LPJ_T0058196.1 MGP_LPJ_G0026614.1 mouse_genomes_project 2 157567452 157568572 - MGP_LPJ_P0058196 Bcl2l1 protein_coding protein_coding MGP_LPJ_T0058197.1 MGP_LPJ_G0026614.1 mouse_genomes_project 2 157567624 157568538 - MGP_LPJ_P0058197 Bcl2l1 protein_coding protein_coding MGP_LPJ_T0058198.1 MGP_LPJ_G0026614.1 mouse_genomes_project 2 157567680 157569630 - MGP_LPJ_P0058198 Bcl2l1 protein_coding protein_coding MGP_LPJ_T0055694.1 MGP_LPJ_G0025967.1 mouse_genomes_project 2 88931521 88932499 + MGP_LPJ_P0055694 Olfr1145 protein_coding protein_coding MGP_LPJ_T0099350.1 MGP_LPJ_G0037613.1 mouse_genomes_project 2 125632610 125632764 - Gm24409 snRNA snRNA MGP_LPJ_T0056924.1 MGP_LPJ_G0026306.1 mouse_genomes_project 2 123737639 123742931 - MGP_LPJ_P0056924 Lrrc57 protein_coding protein_coding MGP_LPJ_T0056925.1 MGP_LPJ_G0026306.1 mouse_genomes_project 2 123737639 123742766 - MGP_LPJ_P0056925 Lrrc57 protein_coding protein_coding MGP_LPJ_T0056926.1 MGP_LPJ_G0026306.1 mouse_genomes_project 2 123737639 123742921 - MGP_LPJ_P0056926 Lrrc57 protein_coding protein_coding MGP_LPJ_T0056927.1 MGP_LPJ_G0026306.1 mouse_genomes_project 2 123737639 123742726 - MGP_LPJ_P0056927 Lrrc57 protein_coding protein_coding MGP_LPJ_T0056928.1 MGP_LPJ_G0026306.1 mouse_genomes_project 2 123738221 123741383 - MGP_LPJ_P0056928 Lrrc57 protein_coding protein_coding MGP_LPJ_T0056929.1 MGP_LPJ_G0026306.1 mouse_genomes_project 2 123739394 123742919 - MGP_LPJ_P0056929 Lrrc57 protein_coding protein_coding MGP_LPJ_T0056930.1 MGP_LPJ_G0026306.1 mouse_genomes_project 2 123742228 123742713 - Lrrc57 protein_coding retained_intron MGP_LPJ_T0102021.1 MGP_LPJ_G0040058.1 mouse_genomes_project 2 84797851 84798824 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013754.1 MGP_LPJ_G0011845.1 mouse_genomes_project 2 148496408 148496716 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017864.1 MGP_LPJ_G0015408.1 mouse_genomes_project 2 174649677 174651644 + Gm14261 processed_transcript processed_transcript MGP_LPJ_T0059471.1 MGP_LPJ_G0026905.1 mouse_genomes_project 2 180928041 180998308 + MGP_LPJ_P0059471 Zfp831 protein_coding protein_coding MGP_LPJ_T0013450.1 MGP_LPJ_G0011541.1 mouse_genomes_project 2 32905815 32906175 - processed_pseudogene processed_pseudogene MGP_LPJ_T0058167.1 MGP_LPJ_G0026601.1 mouse_genomes_project 2 157226230 157229419 + MGP_LPJ_P0058167 Defb28 protein_coding protein_coding MGP_LPJ_T0052635.1 MGP_LPJ_G0025313.1 mouse_genomes_project 2 17004230 17006069 + MGP_LPJ_P0052635 Ptf1a protein_coding protein_coding MGP_LPJ_T0098529.1 MGP_LPJ_G0036804.1 mouse_genomes_project 2 139583946 139584919 + Gm14209 sense_intronic sense_intronic MGP_LPJ_T0052485.1 MGP_LPJ_G0025284.1 mouse_genomes_project 2 10461511 10666786 - MGP_LPJ_P0052485 Rsu1 protein_coding protein_coding MGP_LPJ_T0052486.1 MGP_LPJ_G0025284.1 mouse_genomes_project 2 10461702 10666868 - MGP_LPJ_P0052486 Rsu1 protein_coding protein_coding MGP_LPJ_T0052487.1 MGP_LPJ_G0025284.1 mouse_genomes_project 2 10461885 10666847 - MGP_LPJ_P0052487 Rsu1 protein_coding protein_coding MGP_LPJ_T0052488.1 MGP_LPJ_G0025284.1 mouse_genomes_project 2 10559679 10666761 - Rsu1 protein_coding retained_intron MGP_LPJ_T0052489.1 MGP_LPJ_G0025284.1 mouse_genomes_project 2 10610515 10666786 - Rsu1 protein_coding retained_intron MGP_LPJ_T0052490.1 MGP_LPJ_G0025284.1 mouse_genomes_project 2 10611285 10666723 - MGP_LPJ_P0052490 Rsu1 protein_coding nonsense_mediated_decay MGP_LPJ_T0052491.1 MGP_LPJ_G0025284.1 mouse_genomes_project 2 10613108 10666674 - Rsu1 protein_coding retained_intron MGP_LPJ_T0052492.1 MGP_LPJ_G0025284.1 mouse_genomes_project 2 10613621 10666744 - MGP_LPJ_P0052492 Rsu1 protein_coding protein_coding MGP_LPJ_T0052493.1 MGP_LPJ_G0025284.1 mouse_genomes_project 2 10662913 10666764 - Rsu1 protein_coding retained_intron MGP_LPJ_T0052494.1 MGP_LPJ_G0025284.1 mouse_genomes_project 2 10666212 10666749 - Rsu1 protein_coding retained_intron MGP_LPJ_T0057266.1 MGP_LPJ_G0026377.1 mouse_genomes_project 2 129781180 129971517 - MGP_LPJ_P0057266 Atp8b4 protein_coding protein_coding MGP_LPJ_T0057267.1 MGP_LPJ_G0026377.1 mouse_genomes_project 2 129782743 129963255 - MGP_LPJ_P0057267 Atp8b4 protein_coding protein_coding MGP_LPJ_T0057268.1 MGP_LPJ_G0026377.1 mouse_genomes_project 2 129831514 129963235 - Atp8b4 protein_coding retained_intron MGP_LPJ_T0057269.1 MGP_LPJ_G0026377.1 mouse_genomes_project 2 129831560 129971659 - MGP_LPJ_P0057269 Atp8b4 protein_coding nonsense_mediated_decay MGP_LPJ_T0057270.1 MGP_LPJ_G0026377.1 mouse_genomes_project 2 129855169 129972344 - MGP_LPJ_P0057270 Atp8b4 protein_coding protein_coding MGP_LPJ_T0056682.1 MGP_LPJ_G0026259.1 mouse_genomes_project 2 121811502 121845344 + MGP_LPJ_P0056682 Disp2 protein_coding protein_coding MGP_LPJ_T0056683.1 MGP_LPJ_G0026259.1 mouse_genomes_project 2 121811505 121828062 + MGP_LPJ_P0056683 Disp2 protein_coding protein_coding MGP_LPJ_T0056684.1 MGP_LPJ_G0026259.1 mouse_genomes_project 2 121811522 121845463 + MGP_LPJ_P0056684 Disp2 protein_coding protein_coding MGP_LPJ_T0056685.1 MGP_LPJ_G0026259.1 mouse_genomes_project 2 121811525 121822933 + MGP_LPJ_P0056685 Disp2 protein_coding protein_coding MGP_LPJ_T0056686.1 MGP_LPJ_G0026259.1 mouse_genomes_project 2 121811542 121822932 + Disp2 protein_coding retained_intron MGP_LPJ_T0055988.1 MGP_LPJ_G0026090.1 mouse_genomes_project 2 93072510 93185612 + MGP_LPJ_P0055988 Ckap5 protein_coding protein_coding MGP_LPJ_T0055989.1 MGP_LPJ_G0026090.1 mouse_genomes_project 2 93072726 93109921 + Ckap5 protein_coding processed_transcript MGP_LPJ_T0055990.1 MGP_LPJ_G0026090.1 mouse_genomes_project 2 93100867 93128426 + Ckap5 protein_coding retained_intron MGP_LPJ_T0055991.1 MGP_LPJ_G0026090.1 mouse_genomes_project 2 93100869 93185610 + MGP_LPJ_P0055991 Ckap5 protein_coding protein_coding MGP_LPJ_T0055992.1 MGP_LPJ_G0026090.1 mouse_genomes_project 2 93100869 93185610 + MGP_LPJ_P0055992 Ckap5 protein_coding protein_coding MGP_LPJ_T0055993.1 MGP_LPJ_G0026090.1 mouse_genomes_project 2 93100880 93185611 + MGP_LPJ_P0055993 Ckap5 protein_coding protein_coding MGP_LPJ_T0055994.1 MGP_LPJ_G0026090.1 mouse_genomes_project 2 93109796 93128429 + Ckap5 protein_coding retained_intron MGP_LPJ_T0055995.1 MGP_LPJ_G0026090.1 mouse_genomes_project 2 93158023 93173039 + Ckap5 protein_coding processed_transcript MGP_LPJ_T0055996.1 MGP_LPJ_G0026090.1 mouse_genomes_project 2 93159346 93163947 + Ckap5 protein_coding retained_intron MGP_LPJ_T0098025.1 MGP_LPJ_G0036306.1 mouse_genomes_project 2 92418965 92419238 + pseudogene pseudogene MGP_LPJ_T0054331.1 MGP_LPJ_G0025596.1 mouse_genomes_project 2 35024883 35025813 + MGP_LPJ_P0054331 Olfr339 protein_coding protein_coding MGP_LPJ_T0055628.1 MGP_LPJ_G0025912.1 mouse_genomes_project 2 87378348 87379290 + MGP_LPJ_P0055628 Olfr1076 protein_coding protein_coding MGP_LPJ_T0003910.1 MGP_LPJ_G0003499.1 mouse_genomes_project 2 8848269 8859750 + Gm10851 antisense antisense MGP_LPJ_T0058388.1 MGP_LPJ_G0026666.1 mouse_genomes_project 2 160069730 160075458 + Itch protein_coding retained_intron MGP_LPJ_T0058389.1 MGP_LPJ_G0026666.1 mouse_genomes_project 2 160069730 160111315 + Itch protein_coding retained_intron MGP_LPJ_T0058390.1 MGP_LPJ_G0026666.1 mouse_genomes_project 2 160069730 160164608 + MGP_LPJ_P0058390 Itch protein_coding protein_coding MGP_LPJ_T0058391.1 MGP_LPJ_G0026666.1 mouse_genomes_project 2 160069745 160114777 + Itch protein_coding retained_intron MGP_LPJ_T0058392.1 MGP_LPJ_G0026666.1 mouse_genomes_project 2 160069752 160140301 + Itch protein_coding processed_transcript MGP_LPJ_T0058393.1 MGP_LPJ_G0026666.1 mouse_genomes_project 2 160069780 160164606 + MGP_LPJ_P0058393 Itch protein_coding protein_coding MGP_LPJ_T0058394.1 MGP_LPJ_G0026666.1 mouse_genomes_project 2 160069782 160150847 + Itch protein_coding retained_intron MGP_LPJ_T0004201.1 MGP_LPJ_G0003711.1 mouse_genomes_project 2 179473765 179475496 + Pmepa1os antisense antisense MGP_LPJ_T0056824.1 MGP_LPJ_G0026291.1 mouse_genomes_project 2 123084910 123141094 + MGP_LPJ_P0056824 Mapkbp1 protein_coding protein_coding MGP_LPJ_T0056825.1 MGP_LPJ_G0026291.1 mouse_genomes_project 2 123085265 123141088 + MGP_LPJ_P0056825 Mapkbp1 protein_coding unknown_likely_coding MGP_LPJ_T0056826.1 MGP_LPJ_G0026291.1 mouse_genomes_project 2 123123635 123125044 + Mapkbp1 protein_coding retained_intron MGP_LPJ_T0056827.1 MGP_LPJ_G0026291.1 mouse_genomes_project 2 123124992 123127591 + Mapkbp1 protein_coding retained_intron MGP_LPJ_T0056828.1 MGP_LPJ_G0026291.1 mouse_genomes_project 2 123135761 123136735 + Mapkbp1 protein_coding retained_intron MGP_LPJ_T0007229.1 MGP_LPJ_G0005931.1 mouse_genomes_project 2 66886966 66899310 + Gm1322 lincRNA lincRNA MGP_LPJ_T0001113.1 MGP_LPJ_G0001038.1 mouse_genomes_project 2 68748363 68749857 + TEC TEC MGP_LPJ_T0013562.1 MGP_LPJ_G0011653.1 mouse_genomes_project 2 73254914 73255436 + processed_pseudogene processed_pseudogene MGP_LPJ_T0058291.1 MGP_LPJ_G0026636.1 mouse_genomes_project 2 158686421 158700815 - MGP_LPJ_P0058291 Sun5 protein_coding protein_coding MGP_LPJ_T0058292.1 MGP_LPJ_G0026636.1 mouse_genomes_project 2 158691012 158700815 - Sun5 protein_coding processed_transcript MGP_LPJ_T0058293.1 MGP_LPJ_G0026636.1 mouse_genomes_project 2 158694899 158700815 - Sun5 protein_coding processed_transcript MGP_LPJ_T0004130.1 MGP_LPJ_G0003654.1 mouse_genomes_project 2 148291719 148301413 - Banf2os antisense antisense MGP_LPJ_T0004131.1 MGP_LPJ_G0003654.1 mouse_genomes_project 2 148292149 148301390 - Banf2os antisense antisense MGP_LPJ_T0100582.1 MGP_LPJ_G0038845.1 mouse_genomes_project 2 45241275 45241398 + Gm23072 snoRNA snoRNA MGP_LPJ_T0055720.1 MGP_LPJ_G0025992.1 mouse_genomes_project 2 89675635 89682262 - MGP_LPJ_P0055720 protein_coding protein_coding MGP_LPJ_T0010424.1 MGP_LPJ_G0008542.1 mouse_genomes_project 2 31042848 31042985 - Mir8093 miRNA miRNA MGP_LPJ_T0054919.1 MGP_LPJ_G0025716.1 mouse_genomes_project 2 66163939 66324362 - MGP_LPJ_P0054919 Scn9a protein_coding protein_coding MGP_LPJ_T0054920.1 MGP_LPJ_G0025716.1 mouse_genomes_project 2 66163939 66324362 - MGP_LPJ_P0054920 Scn9a protein_coding protein_coding MGP_LPJ_T0054921.1 MGP_LPJ_G0025716.1 mouse_genomes_project 2 66165950 66324063 - MGP_LPJ_P0054921 Scn9a protein_coding protein_coding MGP_LPJ_T0054922.1 MGP_LPJ_G0025716.1 mouse_genomes_project 2 66165950 66324063 - MGP_LPJ_P0054922 Scn9a protein_coding protein_coding MGP_LPJ_T0054923.1 MGP_LPJ_G0025716.1 mouse_genomes_project 2 66166976 66324063 - MGP_LPJ_P0054923 Scn9a protein_coding protein_coding MGP_LPJ_T0054924.1 MGP_LPJ_G0025716.1 mouse_genomes_project 2 66226379 66229540 - Scn9a protein_coding retained_intron MGP_LPJ_T0054925.1 MGP_LPJ_G0025716.1 mouse_genomes_project 2 66250940 66324372 - Scn9a protein_coding retained_intron MGP_LPJ_T0013585.1 MGP_LPJ_G0011676.1 mouse_genomes_project 2 80560196 80561019 + processed_pseudogene processed_pseudogene MGP_LPJ_T0054593.1 MGP_LPJ_G0025660.1 mouse_genomes_project 2 51108550 51119733 - MGP_LPJ_P0054593 Rbm43 protein_coding protein_coding MGP_LPJ_T0054594.1 MGP_LPJ_G0025660.1 mouse_genomes_project 2 51108550 51119889 - MGP_LPJ_P0054594 Rbm43 protein_coding protein_coding MGP_LPJ_T0054595.1 MGP_LPJ_G0025660.1 mouse_genomes_project 2 51108553 51119370 - MGP_LPJ_P0054595 Rbm43 protein_coding protein_coding MGP_LPJ_T0054596.1 MGP_LPJ_G0025660.1 mouse_genomes_project 2 51109490 51111129 - Rbm43 protein_coding processed_transcript MGP_LPJ_T0054597.1 MGP_LPJ_G0025660.1 mouse_genomes_project 2 51109755 51117438 - Rbm43 protein_coding processed_transcript MGP_LPJ_T0054598.1 MGP_LPJ_G0025660.1 mouse_genomes_project 2 51109974 51119400 - Rbm43 protein_coding processed_transcript MGP_LPJ_T0099315.1 MGP_LPJ_G0037578.1 mouse_genomes_project 2 15713675 15713780 + Gm25147 snRNA snRNA MGP_LPJ_T0004038.1 MGP_LPJ_G0003594.1 mouse_genomes_project 2 80837273 80844448 + Gm13752 antisense antisense MGP_LPJ_T0057074.1 MGP_LPJ_G0026327.1 mouse_genomes_project 2 124561459 124588084 + MGP_LPJ_P0057074 Pdia3 protein_coding protein_coding MGP_LPJ_T0057075.1 MGP_LPJ_G0026327.1 mouse_genomes_project 2 124561567 124572373 + Pdia3 protein_coding processed_transcript MGP_LPJ_T0057076.1 MGP_LPJ_G0026327.1 mouse_genomes_project 2 124561792 124581466 + MGP_LPJ_P0057076 Pdia3 protein_coding nonsense_mediated_decay MGP_LPJ_T0057077.1 MGP_LPJ_G0026327.1 mouse_genomes_project 2 124572401 124579913 + Pdia3 protein_coding retained_intron MGP_LPJ_T0055484.1 MGP_LPJ_G0025833.1 mouse_genomes_project 2 85155111 85156667 - MGP_LPJ_P0055484 2700094K13Rik protein_coding protein_coding MGP_LPJ_T0055485.1 MGP_LPJ_G0025833.1 mouse_genomes_project 2 85155117 85156605 - MGP_LPJ_P0055485 2700094K13Rik protein_coding protein_coding MGP_LPJ_T0055486.1 MGP_LPJ_G0025833.1 mouse_genomes_project 2 85155203 85156573 - MGP_LPJ_P0055486 2700094K13Rik protein_coding protein_coding MGP_LPJ_T0055487.1 MGP_LPJ_G0025833.1 mouse_genomes_project 2 85155591 85156594 - MGP_LPJ_P0055487 2700094K13Rik protein_coding protein_coding MGP_LPJ_T0055488.1 MGP_LPJ_G0025833.1 mouse_genomes_project 2 85155846 85156573 - 2700094K13Rik protein_coding retained_intron MGP_LPJ_T0055489.1 MGP_LPJ_G0025833.1 mouse_genomes_project 2 85155913 85156551 - MGP_LPJ_P0055489 2700094K13Rik protein_coding protein_coding MGP_LPJ_T0057176.1 MGP_LPJ_G0026355.1 mouse_genomes_project 2 125919028 125922780 + MGP_LPJ_P0057176 AA467197 protein_coding protein_coding MGP_LPJ_T0057177.1 MGP_LPJ_G0026355.1 mouse_genomes_project 2 125919893 125923244 + MGP_LPJ_P0057177 AA467197 protein_coding protein_coding MGP_LPJ_T0057178.1 MGP_LPJ_G0026355.1 mouse_genomes_project 2 125919958 125922994 + AA467197 protein_coding processed_transcript MGP_LPJ_T0057179.1 MGP_LPJ_G0026355.1 mouse_genomes_project 2 125919958 125923136 + MGP_LPJ_P0057179 AA467197 protein_coding protein_coding MGP_LPJ_T0054009.1 MGP_LPJ_G0025545.1 mouse_genomes_project 2 30951528 30971421 + MGP_LPJ_P0054009 St6galnac6 protein_coding protein_coding MGP_LPJ_T0054010.1 MGP_LPJ_G0025545.1 mouse_genomes_project 2 30951545 30970474 + MGP_LPJ_P0054010 St6galnac6 protein_coding protein_coding MGP_LPJ_T0054011.1 MGP_LPJ_G0025545.1 mouse_genomes_project 2 30958845 30972698 + MGP_LPJ_P0054011 St6galnac6 protein_coding protein_coding MGP_LPJ_T0054012.1 MGP_LPJ_G0025545.1 mouse_genomes_project 2 30958859 30972698 + MGP_LPJ_P0054012 St6galnac6 protein_coding nonsense_mediated_decay MGP_LPJ_T0054013.1 MGP_LPJ_G0025545.1 mouse_genomes_project 2 30959890 30972696 + MGP_LPJ_P0054013 St6galnac6 protein_coding protein_coding MGP_LPJ_T0054014.1 MGP_LPJ_G0025545.1 mouse_genomes_project 2 30959904 30968683 + St6galnac6 protein_coding retained_intron MGP_LPJ_T0054015.1 MGP_LPJ_G0025545.1 mouse_genomes_project 2 30960283 30972696 + MGP_LPJ_P0054015 St6galnac6 protein_coding protein_coding MGP_LPJ_T0054016.1 MGP_LPJ_G0025545.1 mouse_genomes_project 2 30960536 30964205 + MGP_LPJ_P0054016 St6galnac6 protein_coding protein_coding MGP_LPJ_T0054017.1 MGP_LPJ_G0025545.1 mouse_genomes_project 2 30960832 30966796 + MGP_LPJ_P0054017 St6galnac6 protein_coding protein_coding MGP_LPJ_T0054018.1 MGP_LPJ_G0025545.1 mouse_genomes_project 2 30960862 30966816 + MGP_LPJ_P0054018 St6galnac6 protein_coding protein_coding MGP_LPJ_T0054019.1 MGP_LPJ_G0025545.1 mouse_genomes_project 2 30961121 30972705 + MGP_LPJ_P0054019 St6galnac6 protein_coding protein_coding MGP_LPJ_T0059090.1 MGP_LPJ_G0026820.1 mouse_genomes_project 2 170577066 170611333 - MGP_LPJ_P0059090 Ncoa5 protein_coding protein_coding MGP_LPJ_T0059091.1 MGP_LPJ_G0026820.1 mouse_genomes_project 2 170577069 170611283 - MGP_LPJ_P0059091 Ncoa5 protein_coding protein_coding MGP_LPJ_T0059092.1 MGP_LPJ_G0026820.1 mouse_genomes_project 2 170577072 170611254 - MGP_LPJ_P0059092 Ncoa5 protein_coding protein_coding MGP_LPJ_T0059093.1 MGP_LPJ_G0026820.1 mouse_genomes_project 2 170579390 170581373 - Ncoa5 protein_coding retained_intron MGP_LPJ_T0059094.1 MGP_LPJ_G0026820.1 mouse_genomes_project 2 170586816 170611269 - Ncoa5 protein_coding retained_intron MGP_LPJ_T0059095.1 MGP_LPJ_G0026820.1 mouse_genomes_project 2 170589695 170611295 - MGP_LPJ_P0059095 Ncoa5 protein_coding protein_coding MGP_LPJ_T0059096.1 MGP_LPJ_G0026820.1 mouse_genomes_project 2 170599363 170599905 - Ncoa5 protein_coding processed_transcript MGP_LPJ_T0059097.1 MGP_LPJ_G0026820.1 mouse_genomes_project 2 170599633 170611253 - Ncoa5 protein_coding retained_intron MGP_LPJ_T0055370.1 MGP_LPJ_G0025809.1 mouse_genomes_project 2 79716867 79725759 - MGP_LPJ_P0055370 Cerkl protein_coding protein_coding MGP_LPJ_T0055371.1 MGP_LPJ_G0025809.1 mouse_genomes_project 2 79718076 79831193 - Cerkl protein_coding processed_transcript MGP_LPJ_T0055372.1 MGP_LPJ_G0025809.1 mouse_genomes_project 2 79718826 79720853 - Cerkl protein_coding processed_transcript MGP_LPJ_T0055373.1 MGP_LPJ_G0025809.1 mouse_genomes_project 2 79718854 79831130 - MGP_LPJ_P0055373 Cerkl protein_coding protein_coding MGP_LPJ_T0055374.1 MGP_LPJ_G0025809.1 mouse_genomes_project 2 79718917 79831146 - Cerkl protein_coding processed_transcript MGP_LPJ_T0055375.1 MGP_LPJ_G0025809.1 mouse_genomes_project 2 79718917 79831130 - Cerkl protein_coding processed_transcript MGP_LPJ_T0055376.1 MGP_LPJ_G0025809.1 mouse_genomes_project 2 79718919 79831236 - Cerkl protein_coding processed_transcript MGP_LPJ_T0055377.1 MGP_LPJ_G0025809.1 mouse_genomes_project 2 79725724 79855209 - Cerkl protein_coding processed_transcript MGP_LPJ_T0055378.1 MGP_LPJ_G0025809.1 mouse_genomes_project 2 79730795 79759764 - Cerkl protein_coding processed_transcript MGP_LPJ_T0055379.1 MGP_LPJ_G0025809.1 mouse_genomes_project 2 79742373 79759789 - Cerkl protein_coding processed_transcript MGP_LPJ_T0055380.1 MGP_LPJ_G0025809.1 mouse_genomes_project 2 79776592 79780218 - Cerkl protein_coding processed_transcript MGP_LPJ_T0055381.1 MGP_LPJ_G0025809.1 mouse_genomes_project 2 79777926 79782147 - Cerkl protein_coding processed_transcript MGP_LPJ_T0059777.1 MGP_LPJ_G0026964.1 mouse_genomes_project 2 188310016 188311821 - MGP_LPJ_P0059777 Sox18 protein_coding protein_coding MGP_LPJ_T0053239.1 MGP_LPJ_G0025422.1 mouse_genomes_project 2 24480250 24494236 + MGP_LPJ_P0053239 Egfl7 protein_coding protein_coding MGP_LPJ_T0053240.1 MGP_LPJ_G0025422.1 mouse_genomes_project 2 24481292 24497536 + MGP_LPJ_P0053240 Egfl7 protein_coding protein_coding MGP_LPJ_T0053241.1 MGP_LPJ_G0025422.1 mouse_genomes_project 2 24486747 24497533 + MGP_LPJ_P0053241 Egfl7 protein_coding protein_coding MGP_LPJ_T0053242.1 MGP_LPJ_G0025422.1 mouse_genomes_project 2 24486763 24497534 + MGP_LPJ_P0053242 Egfl7 protein_coding protein_coding MGP_LPJ_T0053243.1 MGP_LPJ_G0025422.1 mouse_genomes_project 2 24486788 24497972 + MGP_LPJ_P0053243 Egfl7 protein_coding nonsense_mediated_decay MGP_LPJ_T0053244.1 MGP_LPJ_G0025422.1 mouse_genomes_project 2 24491478 24497533 + MGP_LPJ_P0053244 Egfl7 protein_coding protein_coding MGP_LPJ_T0053246.1 MGP_LPJ_G0025422.1 mouse_genomes_project 2 24491509 24495760 + Egfl7 protein_coding processed_transcript MGP_LPJ_T0053247.1 MGP_LPJ_G0025422.1 mouse_genomes_project 2 24491520 24495791 + MGP_LPJ_P0053247 Egfl7 protein_coding protein_coding MGP_LPJ_T0053248.1 MGP_LPJ_G0025422.1 mouse_genomes_project 2 24491537 24495341 + MGP_LPJ_P0053248 Egfl7 protein_coding protein_coding MGP_LPJ_T0053249.1 MGP_LPJ_G0025422.1 mouse_genomes_project 2 24493394 24497295 + MGP_LPJ_P0053249 Egfl7 protein_coding protein_coding MGP_LPJ_T0053250.1 MGP_LPJ_G0025422.1 mouse_genomes_project 2 24494186 24496415 + Egfl7 protein_coding retained_intron MGP_LPJ_T0053251.1 MGP_LPJ_G0025422.1 mouse_genomes_project 2 24495371 24495824 + Egfl7 protein_coding retained_intron MGP_LPJ_T0053252.1 MGP_LPJ_G0025422.1 mouse_genomes_project 2 24495816 24497528 + MGP_LPJ_P0053252 Egfl7 protein_coding protein_coding MGP_LPJ_T0053253.1 MGP_LPJ_G0025422.1 mouse_genomes_project 2 24495880 24497534 + MGP_LPJ_P0053253 Egfl7 protein_coding protein_coding MGP_LPJ_T0053254.1 MGP_LPJ_G0025422.1 mouse_genomes_project 2 24496285 24497534 + MGP_LPJ_P0053254 Egfl7 protein_coding protein_coding MGP_LPJ_T0053255.1 MGP_LPJ_G0025422.1 mouse_genomes_project 2 24496286 24497534 + MGP_LPJ_P0053255 Egfl7 protein_coding protein_coding MGP_LPJ_T0053256.1 MGP_LPJ_G0025422.1 mouse_genomes_project 2 24496297 24497142 + Egfl7 protein_coding retained_intron MGP_LPJ_T0053257.1 MGP_LPJ_G0025422.1 mouse_genomes_project 2 24496874 24497533 + Egfl7 protein_coding processed_transcript MGP_LPJ_T0053258.1 MGP_LPJ_G0025422.1 mouse_genomes_project 2 24496998 24497534 + Egfl7 protein_coding retained_intron MGP_LPJ_T0010422.1 MGP_LPJ_G0008540.1 mouse_genomes_project 2 31007338 31007424 + Mir1954 miRNA miRNA MGP_LPJ_T0059244.1 MGP_LPJ_G0026845.1 mouse_genomes_project 2 173037153 173093942 - MGP_LPJ_P0059244 B4galt5 protein_coding protein_coding MGP_LPJ_T0059245.1 MGP_LPJ_G0026845.1 mouse_genomes_project 2 173039901 173044430 - MGP_LPJ_P0059245 B4galt5 protein_coding protein_coding MGP_LPJ_T0059246.1 MGP_LPJ_G0026845.1 mouse_genomes_project 2 173046341 173058575 - B4galt5 protein_coding processed_transcript MGP_LPJ_T0059247.1 MGP_LPJ_G0026845.1 mouse_genomes_project 2 173046341 173058620 - B4galt5 protein_coding processed_transcript MGP_LPJ_T0058249.1 MGP_LPJ_G0026627.1 mouse_genomes_project 2 158008387 158040838 + MGP_LPJ_P0058249 Pofut1 protein_coding protein_coding MGP_LPJ_T0058250.1 MGP_LPJ_G0026627.1 mouse_genomes_project 2 158008395 158036564 + MGP_LPJ_P0058250 Pofut1 protein_coding nonsense_mediated_decay MGP_LPJ_T0058251.1 MGP_LPJ_G0026627.1 mouse_genomes_project 2 158008395 158036564 + MGP_LPJ_P0058251 Pofut1 protein_coding nonsense_mediated_decay MGP_LPJ_T0058252.1 MGP_LPJ_G0026627.1 mouse_genomes_project 2 158008405 158031217 + MGP_LPJ_P0058252 Pofut1 protein_coding protein_coding MGP_LPJ_T0058253.1 MGP_LPJ_G0026627.1 mouse_genomes_project 2 158008423 158018777 + Pofut1 protein_coding retained_intron MGP_LPJ_T0058254.1 MGP_LPJ_G0026627.1 mouse_genomes_project 2 158008432 158037094 + MGP_LPJ_P0058254 Pofut1 protein_coding protein_coding MGP_LPJ_T0058255.1 MGP_LPJ_G0026627.1 mouse_genomes_project 2 158026792 158037877 + MGP_LPJ_P0058255 Pofut1 protein_coding protein_coding MGP_LPJ_T0058256.1 MGP_LPJ_G0026627.1 mouse_genomes_project 2 158026882 158038654 + MGP_LPJ_P0058256 Pofut1 protein_coding protein_coding MGP_LPJ_T0053145.1 MGP_LPJ_G0025408.1 mouse_genomes_project 2 23931105 23970668 - MGP_LPJ_P0053145 Nacc2 protein_coding protein_coding MGP_LPJ_T0053146.1 MGP_LPJ_G0025408.1 mouse_genomes_project 2 23931105 24003786 - MGP_LPJ_P0053146 Nacc2 protein_coding protein_coding MGP_LPJ_T0053147.1 MGP_LPJ_G0025408.1 mouse_genomes_project 2 23937727 23939154 - Nacc2 protein_coding processed_transcript MGP_LPJ_T0053148.1 MGP_LPJ_G0025408.1 mouse_genomes_project 2 23941033 23970310 - Nacc2 protein_coding processed_transcript MGP_LPJ_T0053149.1 MGP_LPJ_G0025408.1 mouse_genomes_project 2 23941155 23968866 - Nacc2 protein_coding processed_transcript MGP_LPJ_T0053150.1 MGP_LPJ_G0025408.1 mouse_genomes_project 2 23968297 24004188 - Nacc2 protein_coding processed_transcript MGP_LPJ_T0053151.1 MGP_LPJ_G0025408.1 mouse_genomes_project 2 23968576 24003751 - MGP_LPJ_P0053151 Nacc2 protein_coding protein_coding MGP_LPJ_T0053152.1 MGP_LPJ_G0025408.1 mouse_genomes_project 2 23968818 24003756 - Nacc2 protein_coding processed_transcript MGP_LPJ_T0052381.1 MGP_LPJ_G0025273.1 mouse_genomes_project 2 8790025 8883734 - MGP_LPJ_P0052381 Pfkfb3 protein_coding protein_coding MGP_LPJ_T0052382.1 MGP_LPJ_G0025273.1 mouse_genomes_project 2 8790383 8822284 - MGP_LPJ_P0052382 Pfkfb3 protein_coding protein_coding MGP_LPJ_T0052383.1 MGP_LPJ_G0025273.1 mouse_genomes_project 2 8790416 8822284 - MGP_LPJ_P0052383 Pfkfb3 protein_coding protein_coding MGP_LPJ_T0052384.1 MGP_LPJ_G0025273.1 mouse_genomes_project 2 8790418 8883579 - MGP_LPJ_P0052384 Pfkfb3 protein_coding nonsense_mediated_decay MGP_LPJ_T0052385.1 MGP_LPJ_G0025273.1 mouse_genomes_project 2 8790418 8822284 - MGP_LPJ_P0052385 Pfkfb3 protein_coding protein_coding MGP_LPJ_T0052386.1 MGP_LPJ_G0025273.1 mouse_genomes_project 2 8790420 8818562 - Pfkfb3 protein_coding processed_transcript MGP_LPJ_T0052387.1 MGP_LPJ_G0025273.1 mouse_genomes_project 2 8792999 8822284 - MGP_LPJ_P0052387 Pfkfb3 protein_coding protein_coding MGP_LPJ_T0052388.1 MGP_LPJ_G0025273.1 mouse_genomes_project 2 8792999 8822284 - MGP_LPJ_P0052388 Pfkfb3 protein_coding protein_coding MGP_LPJ_T0052389.1 MGP_LPJ_G0025273.1 mouse_genomes_project 2 8792999 8821883 - MGP_LPJ_P0052389 Pfkfb3 protein_coding protein_coding MGP_LPJ_T0052390.1 MGP_LPJ_G0025273.1 mouse_genomes_project 2 8792999 8822284 - MGP_LPJ_P0052390 Pfkfb3 protein_coding protein_coding MGP_LPJ_T0052391.1 MGP_LPJ_G0025273.1 mouse_genomes_project 2 8794356 8822273 - MGP_LPJ_P0052391 Pfkfb3 protein_coding protein_coding MGP_LPJ_T0052392.1 MGP_LPJ_G0025273.1 mouse_genomes_project 2 8794356 8822273 - MGP_LPJ_P0052392 Pfkfb3 protein_coding protein_coding MGP_LPJ_T0052393.1 MGP_LPJ_G0025273.1 mouse_genomes_project 2 8796547 8822284 - MGP_LPJ_P0052393 Pfkfb3 protein_coding protein_coding MGP_LPJ_T0052394.1 MGP_LPJ_G0025273.1 mouse_genomes_project 2 8796559 8822284 - MGP_LPJ_P0052394 Pfkfb3 protein_coding protein_coding MGP_LPJ_T0052395.1 MGP_LPJ_G0025273.1 mouse_genomes_project 2 8799703 8822258 - Pfkfb3 protein_coding retained_intron MGP_LPJ_T0052396.1 MGP_LPJ_G0025273.1 mouse_genomes_project 2 8801180 8802282 - Pfkfb3 protein_coding retained_intron MGP_LPJ_T0052397.1 MGP_LPJ_G0025273.1 mouse_genomes_project 2 8810517 8822200 - Pfkfb3 protein_coding processed_transcript MGP_LPJ_T0052398.1 MGP_LPJ_G0025273.1 mouse_genomes_project 2 8812486 8821980 - Pfkfb3 protein_coding retained_intron MGP_LPJ_T0052399.1 MGP_LPJ_G0025273.1 mouse_genomes_project 2 8812786 8818528 - Pfkfb3 protein_coding processed_transcript MGP_LPJ_T0052400.1 MGP_LPJ_G0025273.1 mouse_genomes_project 2 8812813 8821479 - Pfkfb3 protein_coding retained_intron MGP_LPJ_T0052401.1 MGP_LPJ_G0025273.1 mouse_genomes_project 2 8814082 8821046 - Pfkfb3 protein_coding processed_transcript MGP_LPJ_T0055505.1 MGP_LPJ_G0025839.1 mouse_genomes_project 2 85230350 85231837 - MGP_LPJ_P0055505 Gm19426 protein_coding protein_coding MGP_LPJ_T0058125.1 MGP_LPJ_G0026585.1 mouse_genomes_project 2 156673992 156689094 + MGP_LPJ_P0058125 Slc52a3 protein_coding protein_coding MGP_LPJ_T0058126.1 MGP_LPJ_G0026585.1 mouse_genomes_project 2 156674016 156689095 + MGP_LPJ_P0058126 Slc52a3 protein_coding protein_coding MGP_LPJ_T0058127.1 MGP_LPJ_G0026585.1 mouse_genomes_project 2 156677345 156689059 + MGP_LPJ_P0058127 Slc52a3 protein_coding protein_coding MGP_LPJ_T0058128.1 MGP_LPJ_G0026585.1 mouse_genomes_project 2 156677377 156689083 + MGP_LPJ_P0058128 Slc52a3 protein_coding protein_coding MGP_LPJ_T0059542.1 MGP_LPJ_G0026922.1 mouse_genomes_project 2 186766536 186767605 + MGP_LPJ_P0059542 Rps21 protein_coding protein_coding MGP_LPJ_T0059543.1 MGP_LPJ_G0026922.1 mouse_genomes_project 2 186766538 186767602 + Rps21 protein_coding retained_intron MGP_LPJ_T0059544.1 MGP_LPJ_G0026922.1 mouse_genomes_project 2 186766577 186767154 + Rps21 protein_coding retained_intron MGP_LPJ_T0059545.1 MGP_LPJ_G0026922.1 mouse_genomes_project 2 186766577 186767303 + Rps21 protein_coding retained_intron MGP_LPJ_T0058977.1 MGP_LPJ_G0026787.1 mouse_genomes_project 2 169981204 169988835 + Sys1 protein_coding processed_transcript MGP_LPJ_T0058978.1 MGP_LPJ_G0026787.1 mouse_genomes_project 2 169981216 169993404 + MGP_LPJ_P0058978 Sys1 protein_coding protein_coding MGP_LPJ_T0058979.1 MGP_LPJ_G0026787.1 mouse_genomes_project 2 169981328 169989207 + Sys1 protein_coding processed_transcript MGP_LPJ_T0058981.1 MGP_LPJ_G0026787.1 mouse_genomes_project 2 169988869 169993400 + MGP_LPJ_P0058981 Sys1 protein_coding protein_coding MGP_LPJ_T0058982.1 MGP_LPJ_G0026787.1 mouse_genomes_project 2 169988898 170002335 + MGP_LPJ_P0058982 Sys1 protein_coding nonsense_mediated_decay MGP_LPJ_T0058983.1 MGP_LPJ_G0026787.1 mouse_genomes_project 2 169988951 170005610 + MGP_LPJ_P0058983 Sys1 protein_coding nonsense_mediated_decay MGP_LPJ_T0058984.1 MGP_LPJ_G0026787.1 mouse_genomes_project 2 169989207 170002335 + MGP_LPJ_P0058984 Sys1 protein_coding nonsense_mediated_decay MGP_LPJ_T0057570.1 MGP_LPJ_G0026454.1 mouse_genomes_project 2 134426150 134569039 - MGP_LPJ_P0057570 4930402H24Rik protein_coding protein_coding MGP_LPJ_T0057571.1 MGP_LPJ_G0026454.1 mouse_genomes_project 2 134430741 134443388 - MGP_LPJ_P0057571 4930402H24Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0057572.1 MGP_LPJ_G0026454.1 mouse_genomes_project 2 134432209 134456832 - MGP_LPJ_P0057572 4930402H24Rik protein_coding protein_coding MGP_LPJ_T0057573.1 MGP_LPJ_G0026454.1 mouse_genomes_project 2 134443297 134457099 - 4930402H24Rik protein_coding processed_transcript MGP_LPJ_T0057574.1 MGP_LPJ_G0026454.1 mouse_genomes_project 2 134461901 134464881 - 4930402H24Rik protein_coding retained_intron MGP_LPJ_T0057575.1 MGP_LPJ_G0026454.1 mouse_genomes_project 2 134464380 134482554 - 4930402H24Rik protein_coding processed_transcript MGP_LPJ_T0057576.1 MGP_LPJ_G0026454.1 mouse_genomes_project 2 134464391 134495922 - MGP_LPJ_P0057576 4930402H24Rik protein_coding protein_coding MGP_LPJ_T0057577.1 MGP_LPJ_G0026454.1 mouse_genomes_project 2 134473790 134569125 - 4930402H24Rik protein_coding retained_intron MGP_LPJ_T0057578.1 MGP_LPJ_G0026454.1 mouse_genomes_project 2 134502405 134503482 - 4930402H24Rik protein_coding processed_transcript MGP_LPJ_T0057579.1 MGP_LPJ_G0026454.1 mouse_genomes_project 2 134502602 134534534 - 4930402H24Rik protein_coding processed_transcript MGP_LPJ_T0057580.1 MGP_LPJ_G0026454.1 mouse_genomes_project 2 134508508 134569104 - 4930402H24Rik protein_coding retained_intron MGP_LPJ_T0057581.1 MGP_LPJ_G0026454.1 mouse_genomes_project 2 134527468 134537937 - 4930402H24Rik protein_coding processed_transcript MGP_LPJ_T0057582.1 MGP_LPJ_G0026454.1 mouse_genomes_project 2 134529398 134569138 - MGP_LPJ_P0057582 4930402H24Rik protein_coding protein_coding MGP_LPJ_T0057583.1 MGP_LPJ_G0026454.1 mouse_genomes_project 2 134534501 134569130 - MGP_LPJ_P0057583 4930402H24Rik protein_coding protein_coding MGP_LPJ_T0057584.1 MGP_LPJ_G0026454.1 mouse_genomes_project 2 134534536 134569127 - MGP_LPJ_P0057584 4930402H24Rik protein_coding protein_coding MGP_LPJ_T0057585.1 MGP_LPJ_G0026454.1 mouse_genomes_project 2 134536510 134640076 - MGP_LPJ_P0057585 4930402H24Rik protein_coding protein_coding MGP_LPJ_T0055416.1 MGP_LPJ_G0025819.1 mouse_genomes_project 2 81070039 81121146 + Gm4353 protein_coding retained_intron MGP_LPJ_T0055418.1 MGP_LPJ_G0025819.1 mouse_genomes_project 2 81099078 81121142 + MGP_LPJ_P0055418 Gm4353 protein_coding protein_coding MGP_LPJ_T0055420.1 MGP_LPJ_G0025819.1 mouse_genomes_project 2 81099094 81118245 + MGP_LPJ_P0055420 Gm4353 protein_coding protein_coding MGP_LPJ_T0055421.1 MGP_LPJ_G0025819.1 mouse_genomes_project 2 81099530 81108575 + Gm4353 protein_coding processed_transcript MGP_LPJ_T0055422.1 MGP_LPJ_G0025819.1 mouse_genomes_project 2 81106313 81115659 + Gm4353 protein_coding processed_transcript MGP_LPJ_T0054342.1 MGP_LPJ_G0025606.1 mouse_genomes_project 2 35396246 35397188 - MGP_LPJ_P0054342 Olfr3 protein_coding protein_coding MGP_LPJ_T0001064.1 MGP_LPJ_G0000989.1 mouse_genomes_project 2 9704819 9706221 - TEC TEC MGP_LPJ_T0007274.1 MGP_LPJ_G0005969.1 mouse_genomes_project 2 94162401 94174799 - Gm13817 lincRNA lincRNA MGP_LPJ_T0054417.1 MGP_LPJ_G0025633.1 mouse_genomes_project 2 37148430 37232548 + MGP_LPJ_P0054417 Nek6 protein_coding protein_coding MGP_LPJ_T0054418.1 MGP_LPJ_G0025633.1 mouse_genomes_project 2 37148455 37223916 + MGP_LPJ_P0054418 Nek6 protein_coding protein_coding MGP_LPJ_T0054419.1 MGP_LPJ_G0025633.1 mouse_genomes_project 2 37148601 37222207 + MGP_LPJ_P0054419 Nek6 protein_coding protein_coding MGP_LPJ_T0054420.1 MGP_LPJ_G0025633.1 mouse_genomes_project 2 37151368 37196613 + MGP_LPJ_P0054420 Nek6 protein_coding protein_coding MGP_LPJ_T0054421.1 MGP_LPJ_G0025633.1 mouse_genomes_project 2 37151413 37199693 + MGP_LPJ_P0054421 Nek6 protein_coding protein_coding MGP_LPJ_T0004069.1 MGP_LPJ_G0003612.1 mouse_genomes_project 2 112568659 112592384 - Ccdc34os antisense antisense MGP_LPJ_T0004070.1 MGP_LPJ_G0003612.1 mouse_genomes_project 2 112568660 112592387 - Ccdc34os antisense antisense MGP_LPJ_T0007338.1 MGP_LPJ_G0006019.1 mouse_genomes_project 2 131996493 131997595 + Gm14010 lincRNA lincRNA MGP_LPJ_T0013642.1 MGP_LPJ_G0011733.1 mouse_genomes_project 2 100164638 100164810 + processed_pseudogene processed_pseudogene MGP_LPJ_T0058762.1 MGP_LPJ_G0026728.1 mouse_genomes_project 2 163539122 163549614 + MGP_LPJ_P0058762 Snhg11 protein_coding protein_coding MGP_LPJ_T0058763.1 MGP_LPJ_G0026728.1 mouse_genomes_project 2 163539145 163540691 + Snhg11 protein_coding retained_intron MGP_LPJ_T0058764.1 MGP_LPJ_G0026728.1 mouse_genomes_project 2 163539182 163545074 + MGP_LPJ_P0058764 Snhg11 protein_coding nonsense_mediated_decay MGP_LPJ_T0058765.1 MGP_LPJ_G0026728.1 mouse_genomes_project 2 163539199 163542547 + Snhg11 protein_coding retained_intron MGP_LPJ_T0058766.1 MGP_LPJ_G0026728.1 mouse_genomes_project 2 163539209 163544547 + MGP_LPJ_P0058766 Snhg11 protein_coding nonsense_mediated_decay MGP_LPJ_T0056554.1 MGP_LPJ_G0026229.1 mouse_genomes_project 2 115239408 115381714 + MGP_LPJ_P0056554 Aven protein_coding protein_coding MGP_LPJ_T0056555.1 MGP_LPJ_G0026229.1 mouse_genomes_project 2 115305318 115377268 + Aven protein_coding processed_transcript MGP_LPJ_T0056556.1 MGP_LPJ_G0026229.1 mouse_genomes_project 2 115305670 115378103 + MGP_LPJ_P0056556 Aven protein_coding protein_coding MGP_LPJ_T0004083.1 MGP_LPJ_G0003621.1 mouse_genomes_project 2 121778056 121781099 + Inafm2 antisense antisense MGP_LPJ_T0001056.1 MGP_LPJ_G0000981.1 mouse_genomes_project 2 8483200 8484129 + TEC TEC MGP_LPJ_T0056342.1 MGP_LPJ_G0026150.1 mouse_genomes_project 2 106205970 106207523 + MGP_LPJ_P0056342 protein_coding protein_coding MGP_LPJ_T0057986.1 MGP_LPJ_G0026542.1 mouse_genomes_project 2 152487696 152490768 - MGP_LPJ_P0057986 Foxa2 protein_coding protein_coding MGP_LPJ_T0057987.1 MGP_LPJ_G0026542.1 mouse_genomes_project 2 152487696 152491789 - MGP_LPJ_P0057987 Foxa2 protein_coding protein_coding MGP_LPJ_T0057988.1 MGP_LPJ_G0026542.1 mouse_genomes_project 2 152488361 152491716 - MGP_LPJ_P0057988 Foxa2 protein_coding protein_coding MGP_LPJ_T0057989.1 MGP_LPJ_G0026542.1 mouse_genomes_project 2 152489059 152490284 - Foxa2 protein_coding processed_transcript MGP_LPJ_T0055513.1 MGP_LPJ_G0025842.1 mouse_genomes_project 2 85305548 85317215 - MGP_LPJ_P0055513 Smtnl1 protein_coding protein_coding MGP_LPJ_T0013665.1 MGP_LPJ_G0011756.1 mouse_genomes_project 2 107123303 107123647 + processed_pseudogene processed_pseudogene MGP_LPJ_T0052572.1 MGP_LPJ_G0025300.1 mouse_genomes_project 2 15536889 15537431 - MGP_LPJ_P0052572 H2afb1 protein_coding protein_coding MGP_LPJ_T0001088.1 MGP_LPJ_G0001013.1 mouse_genomes_project 2 21954909 21957019 + TEC TEC MGP_LPJ_T0052997.1 MGP_LPJ_G0025376.1 mouse_genomes_project 2 23253050 23254967 + MGP_LPJ_P0052997 Fut7 protein_coding protein_coding MGP_LPJ_T0052998.1 MGP_LPJ_G0025376.1 mouse_genomes_project 2 23253162 23256155 + MGP_LPJ_P0052998 Fut7 protein_coding protein_coding MGP_LPJ_T0052999.1 MGP_LPJ_G0025376.1 mouse_genomes_project 2 23253336 23256158 + MGP_LPJ_P0052999 Fut7 protein_coding protein_coding MGP_LPJ_T0053000.1 MGP_LPJ_G0025376.1 mouse_genomes_project 2 23253477 23256158 + MGP_LPJ_P0053000 Fut7 protein_coding protein_coding MGP_LPJ_T0053001.1 MGP_LPJ_G0025376.1 mouse_genomes_project 2 23254431 23254875 + Fut7 protein_coding processed_transcript MGP_LPJ_T0004048.1 MGP_LPJ_G0003600.1 mouse_genomes_project 2 86399850 86420315 - Gm27175 antisense antisense MGP_LPJ_T0013515.1 MGP_LPJ_G0011606.1 mouse_genomes_project 2 56441961 56442652 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011530.1 MGP_LPJ_G0009648.1 mouse_genomes_project 2 149795689 149796014 - Gm22390 misc_RNA misc_RNA MGP_LPJ_T0055655.1 MGP_LPJ_G0025938.1 mouse_genomes_project 2 88200995 88201952 + MGP_LPJ_P0055655 Olfr1112 protein_coding protein_coding MGP_LPJ_T0013389.1 MGP_LPJ_G0011480.1 mouse_genomes_project 2 8242817 8243655 - processed_pseudogene processed_pseudogene MGP_LPJ_T0056553.1 MGP_LPJ_G0026228.1 mouse_genomes_project 2 115225062 115226661 - MGP_LPJ_P0056553 Chrm5 protein_coding protein_coding MGP_LPJ_T0057150.1 MGP_LPJ_G0026348.1 mouse_genomes_project 2 125545849 125549856 + MGP_LPJ_P0057150 Duoxa2 protein_coding protein_coding MGP_LPJ_T0058444.1 MGP_LPJ_G0026675.1 mouse_genomes_project 2 160589779 160614427 + MGP_LPJ_P0058444 Myh7b protein_coding protein_coding MGP_LPJ_T0058445.1 MGP_LPJ_G0026675.1 mouse_genomes_project 2 160607685 160610501 + Myh7b protein_coding processed_transcript MGP_LPJ_T0058446.1 MGP_LPJ_G0026675.1 mouse_genomes_project 2 160613570 160614323 + Myh7b protein_coding retained_intron MGP_LPJ_T0013493.1 MGP_LPJ_G0011584.1 mouse_genomes_project 2 49553952 49554234 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007152.1 MGP_LPJ_G0005870.1 mouse_genomes_project 2 8630446 8634953 - Gm38171 lincRNA lincRNA MGP_LPJ_T0007267.1 MGP_LPJ_G0005962.1 mouse_genomes_project 2 85731820 85742031 + Gm13715 lincRNA lincRNA MGP_LPJ_T0004125.1 MGP_LPJ_G0003651.1 mouse_genomes_project 2 147091320 147091928 + Kif16bos antisense antisense MGP_LPJ_T0053802.1 MGP_LPJ_G0025513.1 mouse_genomes_project 2 29373472 29441531 + MGP_LPJ_P0053802 Gpr107 protein_coding protein_coding MGP_LPJ_T0053803.1 MGP_LPJ_G0025513.1 mouse_genomes_project 2 29373489 29391961 + Gpr107 protein_coding retained_intron MGP_LPJ_T0053804.1 MGP_LPJ_G0025513.1 mouse_genomes_project 2 29373507 29414855 + Gpr107 protein_coding retained_intron MGP_LPJ_T0053805.1 MGP_LPJ_G0025513.1 mouse_genomes_project 2 29373507 29376758 + Gpr107 protein_coding retained_intron MGP_LPJ_T0053806.1 MGP_LPJ_G0025513.1 mouse_genomes_project 2 29395071 29407603 + Gpr107 protein_coding processed_transcript MGP_LPJ_T0053807.1 MGP_LPJ_G0025513.1 mouse_genomes_project 2 29408028 29431914 + Gpr107 protein_coding retained_intron MGP_LPJ_T0053808.1 MGP_LPJ_G0025513.1 mouse_genomes_project 2 29408358 29411492 + Gpr107 protein_coding processed_transcript MGP_LPJ_T0053809.1 MGP_LPJ_G0025513.1 mouse_genomes_project 2 29411510 29432096 + Gpr107 protein_coding retained_intron MGP_LPJ_T0053810.1 MGP_LPJ_G0025513.1 mouse_genomes_project 2 29419651 29430463 + Gpr107 protein_coding processed_transcript MGP_LPJ_T0053811.1 MGP_LPJ_G0025513.1 mouse_genomes_project 2 29429387 29432818 + Gpr107 protein_coding retained_intron MGP_LPJ_T0053812.1 MGP_LPJ_G0025513.1 mouse_genomes_project 2 29432855 29437322 + Gpr107 protein_coding retained_intron MGP_LPJ_T0013606.1 MGP_LPJ_G0011697.1 mouse_genomes_project 2 88131888 88132423 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013451.1 MGP_LPJ_G0011542.1 mouse_genomes_project 2 32932734 32932990 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013572.1 MGP_LPJ_G0011663.1 mouse_genomes_project 2 77564651 77565084 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013747.1 MGP_LPJ_G0011838.1 mouse_genomes_project 2 147326189 147326809 - processed_pseudogene processed_pseudogene MGP_LPJ_T0058575.1 MGP_LPJ_G0026696.1 mouse_genomes_project 2 161140219 161141978 + MGP_LPJ_P0058575 Romo1 protein_coding protein_coding MGP_LPJ_T0058576.1 MGP_LPJ_G0026696.1 mouse_genomes_project 2 161140413 161141975 + MGP_LPJ_P0058576 Romo1 protein_coding protein_coding MGP_LPJ_T0058577.1 MGP_LPJ_G0026696.1 mouse_genomes_project 2 161140417 161141964 + MGP_LPJ_P0058577 Romo1 protein_coding protein_coding MGP_LPJ_T0058578.1 MGP_LPJ_G0026696.1 mouse_genomes_project 2 161140420 161141975 + MGP_LPJ_P0058578 Romo1 protein_coding protein_coding MGP_LPJ_T0059597.1 MGP_LPJ_G0026937.1 mouse_genomes_project 2 187503997 187508989 + Birc7 protein_coding retained_intron MGP_LPJ_T0059598.1 MGP_LPJ_G0026937.1 mouse_genomes_project 2 187503997 187508992 + MGP_LPJ_P0059598 Birc7 protein_coding protein_coding MGP_LPJ_T0056859.1 MGP_LPJ_G0026300.1 mouse_genomes_project 2 123437038 123476159 - MGP_LPJ_P0056859 Vps39 protein_coding protein_coding MGP_LPJ_T0056860.1 MGP_LPJ_G0026300.1 mouse_genomes_project 2 123437038 123476147 - MGP_LPJ_P0056860 Vps39 protein_coding protein_coding MGP_LPJ_T0056861.1 MGP_LPJ_G0026300.1 mouse_genomes_project 2 123437403 123476143 - Vps39 protein_coding processed_transcript MGP_LPJ_T0056862.1 MGP_LPJ_G0026300.1 mouse_genomes_project 2 123438620 123440168 - Vps39 protein_coding retained_intron MGP_LPJ_T0056863.1 MGP_LPJ_G0026300.1 mouse_genomes_project 2 123440431 123445423 - Vps39 protein_coding retained_intron MGP_LPJ_T0056864.1 MGP_LPJ_G0026300.1 mouse_genomes_project 2 123443785 123476131 - Vps39 protein_coding retained_intron MGP_LPJ_T0056865.1 MGP_LPJ_G0026300.1 mouse_genomes_project 2 123447789 123456242 - Vps39 protein_coding retained_intron MGP_LPJ_T0056866.1 MGP_LPJ_G0026300.1 mouse_genomes_project 2 123461495 123467180 - Vps39 protein_coding processed_transcript MGP_LPJ_T0056867.1 MGP_LPJ_G0026300.1 mouse_genomes_project 2 123466226 123476143 - Vps39 protein_coding processed_transcript MGP_LPJ_T0056868.1 MGP_LPJ_G0026300.1 mouse_genomes_project 2 123471450 123476147 - Vps39 protein_coding processed_transcript MGP_LPJ_T0010378.1 MGP_LPJ_G0008496.1 mouse_genomes_project 2 7783788 7783884 + Gm23542 miRNA miRNA MGP_LPJ_T0007366.1 MGP_LPJ_G0006041.1 mouse_genomes_project 2 152926406 152936392 + Gm14120 lincRNA lincRNA MGP_LPJ_T0007363.1 MGP_LPJ_G0006040.1 mouse_genomes_project 2 152384646 152418566 - 9030622O22Rik lincRNA lincRNA MGP_LPJ_T0007364.1 MGP_LPJ_G0006040.1 mouse_genomes_project 2 152415104 152485024 - 9030622O22Rik lincRNA lincRNA MGP_LPJ_T0007365.1 MGP_LPJ_G0006040.1 mouse_genomes_project 2 152415258 152483091 - 9030622O22Rik lincRNA lincRNA MGP_LPJ_T0004196.1 MGP_LPJ_G0003709.1 mouse_genomes_project 2 179206254 179215148 - Gm14453 antisense antisense MGP_LPJ_T0057428.1 MGP_LPJ_G0026413.1 mouse_genomes_project 2 132276485 132386006 + MGP_LPJ_P0057428 Mertk protein_coding protein_coding MGP_LPJ_T0057429.1 MGP_LPJ_G0026413.1 mouse_genomes_project 2 132353999 132385788 + Mertk protein_coding processed_transcript MGP_LPJ_T0058933.1 MGP_LPJ_G0026768.1 mouse_genomes_project 2 169475164 169498710 + MGP_LPJ_P0058933 Ywhab protein_coding protein_coding MGP_LPJ_T0058934.1 MGP_LPJ_G0026768.1 mouse_genomes_project 2 169475713 169495403 + MGP_LPJ_P0058934 Ywhab protein_coding protein_coding MGP_LPJ_T0013549.1 MGP_LPJ_G0011640.1 mouse_genomes_project 2 68616851 68617241 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001101.1 MGP_LPJ_G0001026.1 mouse_genomes_project 2 36644963 36650310 + TEC TEC MGP_LPJ_T0013581.1 MGP_LPJ_G0011672.1 mouse_genomes_project 2 79402373 79402824 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055588.1 MGP_LPJ_G0025873.1 mouse_genomes_project 2 86536841 86537981 + MGP_LPJ_P0055588 Olfr1014 protein_coding protein_coding MGP_LPJ_T0101307.1 MGP_LPJ_G0039527.1 mouse_genomes_project 2 75040617 75041223 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0010446.1 MGP_LPJ_G0008564.1 mouse_genomes_project 2 76748651 76748754 + Gm23164 miRNA miRNA MGP_LPJ_T0007253.1 MGP_LPJ_G0005950.1 mouse_genomes_project 2 75352560 75383106 - A330043C09Rik lincRNA lincRNA MGP_LPJ_T0013810.1 MGP_LPJ_G0011901.1 mouse_genomes_project 2 166151996 166152854 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003997.1 MGP_LPJ_G0003565.1 mouse_genomes_project 2 64845342 64846262 + Gm13594 antisense antisense MGP_LPJ_T0013800.1 MGP_LPJ_G0011891.1 mouse_genomes_project 2 161892351 161901791 + processed_pseudogene processed_pseudogene MGP_LPJ_T0055591.1 MGP_LPJ_G0025876.1 mouse_genomes_project 2 86587700 86588636 + MGP_LPJ_P0055591 Olfr1018 protein_coding protein_coding MGP_LPJ_T0055495.1 MGP_LPJ_G0025836.1 mouse_genomes_project 2 85172660 85200794 - MGP_LPJ_P0055495 Zdhhc5 protein_coding protein_coding MGP_LPJ_T0055496.1 MGP_LPJ_G0025836.1 mouse_genomes_project 2 85196778 85200300 - Zdhhc5 protein_coding processed_transcript MGP_LPJ_T0055497.1 MGP_LPJ_G0025836.1 mouse_genomes_project 2 85196927 85200650 - Zdhhc5 protein_coding processed_transcript MGP_LPJ_T0013734.1 MGP_LPJ_G0011825.1 mouse_genomes_project 2 138607492 138607805 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055644.1 MGP_LPJ_G0025927.1 mouse_genomes_project 2 87969765 87970731 - MGP_LPJ_P0055644 Olfr1100 protein_coding protein_coding MGP_LPJ_T0056784.1 MGP_LPJ_G0026286.1 mouse_genomes_project 2 122837760 122846691 + MGP_LPJ_P0056784 Itpka protein_coding protein_coding MGP_LPJ_T0011512.1 MGP_LPJ_G0009630.1 mouse_genomes_project 2 43984910 43984987 + Gm27645 misc_RNA misc_RNA MGP_LPJ_T0059661.1 MGP_LPJ_G0026948.1 mouse_genomes_project 2 187817083 187832839 - MGP_LPJ_P0059661 Helz2 protein_coding protein_coding MGP_LPJ_T0059662.1 MGP_LPJ_G0026948.1 mouse_genomes_project 2 187817084 187832837 - MGP_LPJ_P0059662 Helz2 protein_coding protein_coding MGP_LPJ_T0059663.1 MGP_LPJ_G0026948.1 mouse_genomes_project 2 187817087 187832775 - MGP_LPJ_P0059663 Helz2 protein_coding protein_coding MGP_LPJ_T0059664.1 MGP_LPJ_G0026948.1 mouse_genomes_project 2 187817090 187826566 - Helz2 protein_coding retained_intron MGP_LPJ_T0059665.1 MGP_LPJ_G0026948.1 mouse_genomes_project 2 187827968 187832837 - Helz2 protein_coding retained_intron MGP_LPJ_T0054337.1 MGP_LPJ_G0025602.1 mouse_genomes_project 2 35272286 35273216 + MGP_LPJ_P0054337 Olfr346 protein_coding protein_coding MGP_LPJ_T0056382.1 MGP_LPJ_G0026163.1 mouse_genomes_project 2 107115676 107202641 + MGP_LPJ_P0056382 protein_coding protein_coding MGP_LPJ_T0056383.1 MGP_LPJ_G0026163.1 mouse_genomes_project 2 107136900 107251788 + MGP_LPJ_P0056383 protein_coding protein_coding MGP_LPJ_T0056384.1 MGP_LPJ_G0026163.1 mouse_genomes_project 2 107158931 107242046 + MGP_LPJ_P0056384 protein_coding protein_coding MGP_LPJ_T0056385.1 MGP_LPJ_G0026163.1 mouse_genomes_project 2 107244202 107273230 + MGP_LPJ_P0056385 protein_coding protein_coding MGP_LPJ_T0056391.1 MGP_LPJ_G0026163.1 mouse_genomes_project 2 107272506 107273283 + protein_coding processed_transcript MGP_LPJ_T0007367.1 MGP_LPJ_G0006042.1 mouse_genomes_project 2 153778134 153783003 + Gm14135 lincRNA lincRNA MGP_LPJ_T0013452.1 MGP_LPJ_G0011543.1 mouse_genomes_project 2 33506016 33506183 - processed_pseudogene processed_pseudogene MGP_LPJ_T0054338.1 MGP_LPJ_G0025603.1 mouse_genomes_project 2 35319683 35320622 + MGP_LPJ_P0054338 Olfr347 protein_coding protein_coding MGP_LPJ_T0055082.1 MGP_LPJ_G0025751.1 mouse_genomes_project 2 71056966 71085366 + MGP_LPJ_P0055082 Cybrd1 protein_coding protein_coding MGP_LPJ_T0055642.1 MGP_LPJ_G0025925.1 mouse_genomes_project 2 87839946 87869203 - MGP_LPJ_P0055642 Olfr1098 protein_coding protein_coding MGP_LPJ_T0053520.1 MGP_LPJ_G0025476.1 mouse_genomes_project 2 27910636 27933499 + Urm1 protein_coding processed_transcript MGP_LPJ_T0053521.1 MGP_LPJ_G0025476.1 mouse_genomes_project 2 27917790 27933728 + Urm1 protein_coding processed_transcript MGP_LPJ_T0053522.1 MGP_LPJ_G0025476.1 mouse_genomes_project 2 27917790 27935356 + MGP_LPJ_P0053522 Urm1 protein_coding protein_coding MGP_LPJ_T0053523.1 MGP_LPJ_G0025476.1 mouse_genomes_project 2 27917809 27933775 + Urm1 protein_coding processed_transcript MGP_LPJ_T0053524.1 MGP_LPJ_G0025476.1 mouse_genomes_project 2 27917843 27924068 + Urm1 protein_coding retained_intron MGP_LPJ_T0053525.1 MGP_LPJ_G0025476.1 mouse_genomes_project 2 27932001 27934418 + Urm1 protein_coding retained_intron MGP_LPJ_T0055599.1 MGP_LPJ_G0025883.1 mouse_genomes_project 2 86700333 86701257 + MGP_LPJ_P0055599 Olfr1026 protein_coding protein_coding MGP_LPJ_T0055635.1 MGP_LPJ_G0025918.1 mouse_genomes_project 2 87631478 87632420 - MGP_LPJ_P0055635 Olfr1087 protein_coding protein_coding MGP_LPJ_T0053834.1 MGP_LPJ_G0025518.1 mouse_genomes_project 2 29888438 29904171 + MGP_LPJ_P0053834 Prdm12 protein_coding protein_coding MGP_LPJ_T0013620.1 MGP_LPJ_G0011711.1 mouse_genomes_project 2 88761913 88762370 - processed_pseudogene processed_pseudogene MGP_LPJ_T0056022.1 MGP_LPJ_G0026095.1 mouse_genomes_project 2 93280570 93282046 + MGP_LPJ_P0056022 Harbi1 protein_coding protein_coding MGP_LPJ_T0056023.1 MGP_LPJ_G0026095.1 mouse_genomes_project 2 93280571 93282444 + MGP_LPJ_P0056023 Harbi1 protein_coding protein_coding MGP_LPJ_T0056024.1 MGP_LPJ_G0026095.1 mouse_genomes_project 2 93280635 93286215 + MGP_LPJ_P0056024 Harbi1 protein_coding protein_coding MGP_LPJ_T0056025.1 MGP_LPJ_G0026095.1 mouse_genomes_project 2 93280640 93292434 + MGP_LPJ_P0056025 Harbi1 protein_coding protein_coding MGP_LPJ_T0056026.1 MGP_LPJ_G0026095.1 mouse_genomes_project 2 93281913 93290176 + MGP_LPJ_P0056026 Harbi1 protein_coding protein_coding MGP_LPJ_T0017736.1 MGP_LPJ_G0015346.1 mouse_genomes_project 2 74861752 74872503 + Gm28309 processed_transcript processed_transcript MGP_LPJ_T0100572.1 MGP_LPJ_G0038835.1 mouse_genomes_project 2 30530534 30530619 + Gm22192 snoRNA snoRNA MGP_LPJ_T0058943.1 MGP_LPJ_G0026771.1 mouse_genomes_project 2 169557423 169574795 + MGP_LPJ_P0058943 Stk4 protein_coding protein_coding MGP_LPJ_T0058944.1 MGP_LPJ_G0026771.1 mouse_genomes_project 2 169562295 169647453 + MGP_LPJ_P0058944 Stk4 protein_coding protein_coding MGP_LPJ_T0058945.1 MGP_LPJ_G0026771.1 mouse_genomes_project 2 169569998 169585078 + Stk4 protein_coding processed_transcript MGP_LPJ_T0058946.1 MGP_LPJ_G0026771.1 mouse_genomes_project 2 169587757 169608728 + MGP_LPJ_P0058946 Stk4 protein_coding protein_coding MGP_LPJ_T0058947.1 MGP_LPJ_G0026771.1 mouse_genomes_project 2 169600622 169647453 + MGP_LPJ_P0058947 Stk4 protein_coding protein_coding MGP_LPJ_T0058234.1 MGP_LPJ_G0026623.1 mouse_genomes_project 2 157863007 157907834 + MGP_LPJ_P0058234 Hck protein_coding protein_coding MGP_LPJ_T0058235.1 MGP_LPJ_G0026623.1 mouse_genomes_project 2 157863007 157907836 + MGP_LPJ_P0058235 Hck protein_coding protein_coding MGP_LPJ_T0100641.1 MGP_LPJ_G0038904.1 mouse_genomes_project 2 168167979 168168105 + Gm22936 snoRNA snoRNA MGP_LPJ_T0058015.1 MGP_LPJ_G0026557.1 mouse_genomes_project 2 153363528 153367383 - MGP_LPJ_P0058015 Cst3 protein_coding protein_coding MGP_LPJ_T0058016.1 MGP_LPJ_G0026557.1 mouse_genomes_project 2 153364278 153367258 - Cst3 protein_coding processed_transcript MGP_LPJ_T0058017.1 MGP_LPJ_G0026557.1 mouse_genomes_project 2 153364654 153367499 - MGP_LPJ_P0058017 Cst3 protein_coding protein_coding MGP_LPJ_T0054729.1 MGP_LPJ_G0025688.1 mouse_genomes_project 2 59260257 59298775 - MGP_LPJ_P0054729 Wdsub1 protein_coding protein_coding MGP_LPJ_T0054730.1 MGP_LPJ_G0025688.1 mouse_genomes_project 2 59264330 59298738 - MGP_LPJ_P0054730 Wdsub1 protein_coding protein_coding MGP_LPJ_T0054731.1 MGP_LPJ_G0025688.1 mouse_genomes_project 2 59270553 59271956 - Wdsub1 protein_coding processed_transcript MGP_LPJ_T0054732.1 MGP_LPJ_G0025688.1 mouse_genomes_project 2 59270562 59270910 - Wdsub1 protein_coding processed_transcript MGP_LPJ_T0054733.1 MGP_LPJ_G0025688.1 mouse_genomes_project 2 59270790 59293033 - MGP_LPJ_P0054733 Wdsub1 protein_coding protein_coding MGP_LPJ_T0054734.1 MGP_LPJ_G0025688.1 mouse_genomes_project 2 59270917 59272791 - Wdsub1 protein_coding processed_transcript MGP_LPJ_T0054735.1 MGP_LPJ_G0025688.1 mouse_genomes_project 2 59271902 59298748 - Wdsub1 protein_coding processed_transcript MGP_LPJ_T0054736.1 MGP_LPJ_G0025688.1 mouse_genomes_project 2 59286521 59294355 - MGP_LPJ_P0054736 Wdsub1 protein_coding protein_coding MGP_LPJ_T0054737.1 MGP_LPJ_G0025688.1 mouse_genomes_project 2 59289225 59294537 - Wdsub1 protein_coding processed_transcript MGP_LPJ_T0054738.1 MGP_LPJ_G0025688.1 mouse_genomes_project 2 59292857 59298777 - MGP_LPJ_P0054738 Wdsub1 protein_coding protein_coding MGP_LPJ_T0054739.1 MGP_LPJ_G0025688.1 mouse_genomes_project 2 59292858 59298765 - MGP_LPJ_P0054739 Wdsub1 protein_coding protein_coding MGP_LPJ_T0054740.1 MGP_LPJ_G0025688.1 mouse_genomes_project 2 59294522 59298782 - Wdsub1 protein_coding processed_transcript MGP_LPJ_T0013595.1 MGP_LPJ_G0011686.1 mouse_genomes_project 2 83131536 83131876 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007406.1 MGP_LPJ_G0006076.1 mouse_genomes_project 2 172050564 172071774 - Gm14268 lincRNA lincRNA MGP_LPJ_T0007407.1 MGP_LPJ_G0006076.1 mouse_genomes_project 2 172050850 172071804 - Gm14268 lincRNA lincRNA MGP_LPJ_T0054308.1 MGP_LPJ_G0025591.1 mouse_genomes_project 2 34684122 34707168 - MGP_LPJ_P0054308 Lhx6 protein_coding protein_coding MGP_LPJ_T0054309.1 MGP_LPJ_G0025591.1 mouse_genomes_project 2 34684122 34708378 - MGP_LPJ_P0054309 Lhx6 protein_coding protein_coding MGP_LPJ_T0054310.1 MGP_LPJ_G0025591.1 mouse_genomes_project 2 34684122 34708515 - MGP_LPJ_P0054310 Lhx6 protein_coding protein_coding MGP_LPJ_T0054311.1 MGP_LPJ_G0025591.1 mouse_genomes_project 2 34684122 34707168 - MGP_LPJ_P0054311 Lhx6 protein_coding protein_coding MGP_LPJ_T0054312.1 MGP_LPJ_G0025591.1 mouse_genomes_project 2 34684123 34708515 - MGP_LPJ_P0054312 Lhx6 protein_coding protein_coding MGP_LPJ_T0054313.1 MGP_LPJ_G0025591.1 mouse_genomes_project 2 34685854 34696444 - MGP_LPJ_P0054313 Lhx6 protein_coding protein_coding MGP_LPJ_T0054314.1 MGP_LPJ_G0025591.1 mouse_genomes_project 2 34685857 34707998 - MGP_LPJ_P0054314 Lhx6 protein_coding protein_coding MGP_LPJ_T0054315.1 MGP_LPJ_G0025591.1 mouse_genomes_project 2 34696395 34706700 - Lhx6 protein_coding retained_intron MGP_LPJ_T0054316.1 MGP_LPJ_G0025591.1 mouse_genomes_project 2 34703562 34708362 - Lhx6 protein_coding processed_transcript MGP_LPJ_T0013820.1 MGP_LPJ_G0011911.1 mouse_genomes_project 2 171597215 171597777 + processed_pseudogene processed_pseudogene MGP_LPJ_T0054169.1 MGP_LPJ_G0025570.1 mouse_genomes_project 2 33185718 33275332 - MGP_LPJ_P0054169 Gapvd1 protein_coding protein_coding MGP_LPJ_T0054170.1 MGP_LPJ_G0025570.1 mouse_genomes_project 2 33187300 33274571 - MGP_LPJ_P0054170 Gapvd1 protein_coding protein_coding MGP_LPJ_T0054171.1 MGP_LPJ_G0025570.1 mouse_genomes_project 2 33188109 33274678 - MGP_LPJ_P0054171 Gapvd1 protein_coding protein_coding MGP_LPJ_T0054172.1 MGP_LPJ_G0025570.1 mouse_genomes_project 2 33188109 33274678 - MGP_LPJ_P0054172 Gapvd1 protein_coding protein_coding MGP_LPJ_T0054173.1 MGP_LPJ_G0025570.1 mouse_genomes_project 2 33188607 33219730 - MGP_LPJ_P0054173 Gapvd1 protein_coding protein_coding MGP_LPJ_T0054174.1 MGP_LPJ_G0025570.1 mouse_genomes_project 2 33189018 33195848 - MGP_LPJ_P0054174 Gapvd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0054175.1 MGP_LPJ_G0025570.1 mouse_genomes_project 2 33207745 33219990 - Gapvd1 protein_coding processed_transcript MGP_LPJ_T0054176.1 MGP_LPJ_G0025570.1 mouse_genomes_project 2 33212009 33216380 - Gapvd1 protein_coding retained_intron MGP_LPJ_T0054177.1 MGP_LPJ_G0025570.1 mouse_genomes_project 2 33215150 33246442 - MGP_LPJ_P0054177 Gapvd1 protein_coding protein_coding MGP_LPJ_T0054178.1 MGP_LPJ_G0025570.1 mouse_genomes_project 2 33215171 33246345 - MGP_LPJ_P0054178 Gapvd1 protein_coding protein_coding MGP_LPJ_T0054179.1 MGP_LPJ_G0025570.1 mouse_genomes_project 2 33219646 33227668 - MGP_LPJ_P0054179 Gapvd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0054180.1 MGP_LPJ_G0025570.1 mouse_genomes_project 2 33219690 33227783 - Gapvd1 protein_coding processed_transcript MGP_LPJ_T0054181.1 MGP_LPJ_G0025570.1 mouse_genomes_project 2 33224631 33228179 - Gapvd1 protein_coding retained_intron MGP_LPJ_T0054182.1 MGP_LPJ_G0025570.1 mouse_genomes_project 2 33242901 33274542 - Gapvd1 protein_coding retained_intron MGP_LPJ_T0054183.1 MGP_LPJ_G0025570.1 mouse_genomes_project 2 33246415 33274528 - MGP_LPJ_P0054183 Gapvd1 protein_coding protein_coding MGP_LPJ_T0100574.1 MGP_LPJ_G0038837.1 mouse_genomes_project 2 31030282 31030419 + Gm26236 snoRNA snoRNA MGP_LPJ_T0013494.1 MGP_LPJ_G0011585.1 mouse_genomes_project 2 49666890 49667069 - processed_pseudogene processed_pseudogene MGP_LPJ_T0056539.1 MGP_LPJ_G0026223.1 mouse_genomes_project 2 114994554 115086231 + MGP_LPJ_P0056539 Slc12a6 protein_coding protein_coding MGP_LPJ_T0056541.1 MGP_LPJ_G0026223.1 mouse_genomes_project 2 114995471 115083133 + MGP_LPJ_P0056541 Slc12a6 protein_coding protein_coding MGP_LPJ_T0056542.1 MGP_LPJ_G0026223.1 mouse_genomes_project 2 114995548 115091085 + MGP_LPJ_P0056542 Slc12a6 protein_coding protein_coding MGP_LPJ_T0056543.1 MGP_LPJ_G0026223.1 mouse_genomes_project 2 115014573 115091085 + MGP_LPJ_P0056543 Slc12a6 protein_coding protein_coding MGP_LPJ_T0056544.1 MGP_LPJ_G0026223.1 mouse_genomes_project 2 115071992 115076714 + Slc12a6 protein_coding processed_transcript MGP_LPJ_T0056545.1 MGP_LPJ_G0026223.1 mouse_genomes_project 2 115079629 115081342 + Slc12a6 protein_coding processed_transcript MGP_LPJ_T0056546.1 MGP_LPJ_G0026223.1 mouse_genomes_project 2 115081305 115083991 + Slc12a6 protein_coding processed_transcript MGP_LPJ_T0056547.1 MGP_LPJ_G0026223.1 mouse_genomes_project 2 115083298 115091092 + Slc12a6 protein_coding retained_intron MGP_LPJ_T0056000.1 MGP_LPJ_G0026092.1 mouse_genomes_project 2 93210561 93216684 - MGP_LPJ_P0056000 Zfp408 protein_coding protein_coding MGP_LPJ_T0056001.1 MGP_LPJ_G0026092.1 mouse_genomes_project 2 93210581 93216696 - MGP_LPJ_P0056001 Zfp408 protein_coding protein_coding MGP_LPJ_T0056002.1 MGP_LPJ_G0026092.1 mouse_genomes_project 2 93213183 93215141 - Zfp408 protein_coding retained_intron MGP_LPJ_T0056003.1 MGP_LPJ_G0026092.1 mouse_genomes_project 2 93214573 93216664 - MGP_LPJ_P0056003 Zfp408 protein_coding nonsense_mediated_decay MGP_LPJ_T0056004.1 MGP_LPJ_G0026092.1 mouse_genomes_project 2 93214921 93216648 - Zfp408 protein_coding processed_transcript MGP_LPJ_T0056005.1 MGP_LPJ_G0026092.1 mouse_genomes_project 2 93215840 93216665 - Zfp408 protein_coding processed_transcript MGP_LPJ_T0017705.1 MGP_LPJ_G0015326.1 mouse_genomes_project 2 28433684 28453815 - Gm14471 processed_transcript processed_transcript MGP_LPJ_T0013571.1 MGP_LPJ_G0011662.1 mouse_genomes_project 2 76053858 76054624 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013717.1 MGP_LPJ_G0011808.1 mouse_genomes_project 2 133419575 133420092 + processed_pseudogene processed_pseudogene MGP_LPJ_T0059377.1 MGP_LPJ_G0026879.1 mouse_genomes_project 2 178544858 178575528 + MGP_LPJ_P0059377 Rtfdc1 protein_coding protein_coding MGP_LPJ_T0059378.1 MGP_LPJ_G0026879.1 mouse_genomes_project 2 178544904 178572276 + Rtfdc1 protein_coding retained_intron MGP_LPJ_T0059381.1 MGP_LPJ_G0026879.1 mouse_genomes_project 2 178557376 178575528 + Rtfdc1 protein_coding processed_transcript MGP_LPJ_T0013727.1 MGP_LPJ_G0011818.1 mouse_genomes_project 2 135677742 135678616 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013736.1 MGP_LPJ_G0011827.1 mouse_genomes_project 2 140348315 140349019 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004148.1 MGP_LPJ_G0003670.1 mouse_genomes_project 2 158453292 158454889 - Dnmt3bos antisense antisense MGP_LPJ_T0013568.1 MGP_LPJ_G0011659.1 mouse_genomes_project 2 75071603 75072238 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017787.1 MGP_LPJ_G0015373.1 mouse_genomes_project 2 120843846 121105145 - Gm13986 processed_transcript processed_transcript MGP_LPJ_T0017788.1 MGP_LPJ_G0015373.1 mouse_genomes_project 2 121062126 121105034 - Gm13986 processed_transcript processed_transcript MGP_LPJ_T0013697.1 MGP_LPJ_G0011788.1 mouse_genomes_project 2 122583820 122584495 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007448.1 MGP_LPJ_G0006111.1 mouse_genomes_project 2 187378459 187387455 - Gm14340 lincRNA lincRNA MGP_LPJ_T0013473.1 MGP_LPJ_G0011564.1 mouse_genomes_project 2 38266046 38267143 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017843.1 MGP_LPJ_G0015400.1 mouse_genomes_project 2 163516398 163519542 - Snhg17 processed_transcript lincRNA MGP_LPJ_T0017844.1 MGP_LPJ_G0015400.1 mouse_genomes_project 2 163518005 163524210 - Snhg17 processed_transcript lincRNA MGP_LPJ_T0017845.1 MGP_LPJ_G0015400.1 mouse_genomes_project 2 163518463 163524219 - Snhg17 processed_transcript lincRNA MGP_LPJ_T0017846.1 MGP_LPJ_G0015400.1 mouse_genomes_project 2 163518463 163524280 - Snhg17 processed_transcript lincRNA MGP_LPJ_T0017847.1 MGP_LPJ_G0015400.1 mouse_genomes_project 2 163518463 163524222 - Snhg17 processed_transcript retained_intron MGP_LPJ_T0017848.1 MGP_LPJ_G0015400.1 mouse_genomes_project 2 163518483 163524213 - Snhg17 processed_transcript retained_intron MGP_LPJ_T0017849.1 MGP_LPJ_G0015400.1 mouse_genomes_project 2 163518720 163521164 - Snhg17 processed_transcript lincRNA MGP_LPJ_T0017850.1 MGP_LPJ_G0015400.1 mouse_genomes_project 2 163521938 163524175 - Snhg17 processed_transcript lincRNA MGP_LPJ_T0017851.1 MGP_LPJ_G0015400.1 mouse_genomes_project 2 163523566 163524242 - Snhg17 processed_transcript lincRNA MGP_LPJ_T0013390.1 MGP_LPJ_G0011481.1 mouse_genomes_project 2 8396759 8397693 + processed_pseudogene processed_pseudogene MGP_LPJ_T0053071.1 MGP_LPJ_G0025389.1 mouse_genomes_project 2 23423323 23450082 - MGP_LPJ_P0053071 Rabl6 protein_coding protein_coding MGP_LPJ_T0053072.1 MGP_LPJ_G0025389.1 mouse_genomes_project 2 23424416 23430716 - Rabl6 protein_coding processed_transcript MGP_LPJ_T0053073.1 MGP_LPJ_G0025389.1 mouse_genomes_project 2 23424416 23450026 - Rabl6 protein_coding processed_transcript MGP_LPJ_T0053074.1 MGP_LPJ_G0025389.1 mouse_genomes_project 2 23424440 23425366 - Rabl6 protein_coding processed_transcript MGP_LPJ_T0053075.1 MGP_LPJ_G0025389.1 mouse_genomes_project 2 23425494 23426129 - Rabl6 protein_coding processed_transcript MGP_LPJ_T0053076.1 MGP_LPJ_G0025389.1 mouse_genomes_project 2 23425979 23427651 - Rabl6 protein_coding processed_transcript MGP_LPJ_T0053077.1 MGP_LPJ_G0025389.1 mouse_genomes_project 2 23427788 23429503 - Rabl6 protein_coding processed_transcript MGP_LPJ_T0053078.1 MGP_LPJ_G0025389.1 mouse_genomes_project 2 23427870 23450046 - Rabl6 protein_coding processed_transcript MGP_LPJ_T0053079.1 MGP_LPJ_G0025389.1 mouse_genomes_project 2 23438133 23450017 - Rabl6 protein_coding processed_transcript MGP_LPJ_T0058883.1 MGP_LPJ_G0026754.1 mouse_genomes_project 2 168664663 168794936 + MGP_LPJ_P0058883 Tox2 protein_coding protein_coding MGP_LPJ_T0058884.1 MGP_LPJ_G0026754.1 mouse_genomes_project 2 168666091 168740805 + MGP_LPJ_P0058884 Tox2 protein_coding protein_coding MGP_LPJ_T0058885.1 MGP_LPJ_G0026754.1 mouse_genomes_project 2 168688646 168794068 + MGP_LPJ_P0058885 Tox2 protein_coding protein_coding MGP_LPJ_T0058886.1 MGP_LPJ_G0026754.1 mouse_genomes_project 2 168688737 168793868 + MGP_LPJ_P0058886 Tox2 protein_coding protein_coding MGP_LPJ_T0058887.1 MGP_LPJ_G0026754.1 mouse_genomes_project 2 168791143 168793868 + MGP_LPJ_P0058887 Tox2 protein_coding protein_coding MGP_LPJ_T0013748.1 MGP_LPJ_G0011839.1 mouse_genomes_project 2 147343248 147344049 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055260.1 MGP_LPJ_G0025789.1 mouse_genomes_project 2 75891258 75923726 - MGP_LPJ_P0055260 Nfe2l2 protein_coding protein_coding MGP_LPJ_T0055261.1 MGP_LPJ_G0025789.1 mouse_genomes_project 2 75910136 75923574 - Nfe2l2 protein_coding processed_transcript MGP_LPJ_T0004138.1 MGP_LPJ_G0003661.1 mouse_genomes_project 2 151773344 151774213 - AI646519 antisense antisense MGP_LPJ_T0099323.1 MGP_LPJ_G0037586.1 mouse_genomes_project 2 28029833 28029930 - Gm23865 snRNA snRNA MGP_LPJ_T0017747.1 MGP_LPJ_G0015356.1 mouse_genomes_project 2 92410028 92419181 - Ptpmt1 processed_transcript processed_transcript MGP_LPJ_T0017748.1 MGP_LPJ_G0015356.1 mouse_genomes_project 2 92412025 92419374 - Ptpmt1 processed_transcript processed_transcript MGP_LPJ_T0017749.1 MGP_LPJ_G0015356.1 mouse_genomes_project 2 92412025 92419582 - Ptpmt1 processed_transcript processed_transcript MGP_LPJ_T0017750.1 MGP_LPJ_G0015356.1 mouse_genomes_project 2 92412306 92418919 - Ptpmt1 processed_transcript processed_transcript MGP_LPJ_T0017751.1 MGP_LPJ_G0015356.1 mouse_genomes_project 2 92415350 92418992 - Ptpmt1 processed_transcript processed_transcript MGP_LPJ_T0055807.1 MGP_LPJ_G0026057.1 mouse_genomes_project 2 91377470 91380845 + MGP_LPJ_P0055807 Olfr1263 protein_coding protein_coding MGP_LPJ_T0055732.1 MGP_LPJ_G0026003.1 mouse_genomes_project 2 90034546 90035473 - MGP_LPJ_P0055732 Olfr1198 protein_coding protein_coding MGP_LPJ_T0057855.1 MGP_LPJ_G0026513.1 mouse_genomes_project 2 147753304 148028367 + MGP_LPJ_P0057855 Pcsk2 protein_coding protein_coding MGP_LPJ_T0057856.1 MGP_LPJ_G0026513.1 mouse_genomes_project 2 147753419 147785382 + Pcsk2 protein_coding processed_transcript MGP_LPJ_T0058784.1 MGP_LPJ_G0026733.1 mouse_genomes_project 2 163803824 163819910 + Actr5 protein_coding retained_intron MGP_LPJ_T0058785.1 MGP_LPJ_G0026733.1 mouse_genomes_project 2 163803824 163808094 + Actr5 protein_coding retained_intron MGP_LPJ_T0058786.1 MGP_LPJ_G0026733.1 mouse_genomes_project 2 163803824 163819910 + MGP_LPJ_P0058786 Actr5 protein_coding nonsense_mediated_decay MGP_LPJ_T0058787.1 MGP_LPJ_G0026733.1 mouse_genomes_project 2 163803824 163819923 + MGP_LPJ_P0058787 Actr5 protein_coding protein_coding MGP_LPJ_T0058788.1 MGP_LPJ_G0026733.1 mouse_genomes_project 2 163810565 163817409 + Actr5 protein_coding processed_transcript MGP_LPJ_T0055560.1 MGP_LPJ_G0025854.1 mouse_genomes_project 2 85885514 85903087 - MGP_LPJ_P0055560 protein_coding protein_coding MGP_LPJ_T0098409.1 MGP_LPJ_G0036690.1 mouse_genomes_project 2 50672290 50672420 - Gm23505 scaRNA scaRNA MGP_LPJ_T0013656.1 MGP_LPJ_G0011747.1 mouse_genomes_project 2 105940235 105940967 - processed_pseudogene processed_pseudogene MGP_LPJ_T0058940.1 MGP_LPJ_G0026770.1 mouse_genomes_project 2 169540151 169552869 - Tomm34 protein_coding retained_intron MGP_LPJ_T0058941.1 MGP_LPJ_G0026770.1 mouse_genomes_project 2 169540151 169558271 - MGP_LPJ_P0058941 Tomm34 protein_coding protein_coding MGP_LPJ_T0058942.1 MGP_LPJ_G0026770.1 mouse_genomes_project 2 169540151 169558204 - MGP_LPJ_P0058942 Tomm34 protein_coding protein_coding MGP_LPJ_T0010371.1 MGP_LPJ_G0008489.1 mouse_genomes_project 2 7780536 7780634 + Mir297c miRNA miRNA MGP_LPJ_T0058777.1 MGP_LPJ_G0026730.1 mouse_genomes_project 2 163671024 163676608 + MGP_LPJ_P0058777 Adig protein_coding protein_coding MGP_LPJ_T0058778.1 MGP_LPJ_G0026730.1 mouse_genomes_project 2 163671065 163676608 + MGP_LPJ_P0058778 Adig protein_coding protein_coding MGP_LPJ_T0058779.1 MGP_LPJ_G0026730.1 mouse_genomes_project 2 163671151 163674320 + Adig protein_coding processed_transcript MGP_LPJ_T0053708.1 MGP_LPJ_G0025500.1 mouse_genomes_project 2 28549757 28585179 + MGP_LPJ_P0053708 Ptpa protein_coding protein_coding MGP_LPJ_T0053709.1 MGP_LPJ_G0025500.1 mouse_genomes_project 2 28549849 28585180 + MGP_LPJ_P0053709 Ptpa protein_coding protein_coding MGP_LPJ_T0053710.1 MGP_LPJ_G0025500.1 mouse_genomes_project 2 28549855 28568333 + MGP_LPJ_P0053710 Ptpa protein_coding nonsense_mediated_decay MGP_LPJ_T0053711.1 MGP_LPJ_G0025500.1 mouse_genomes_project 2 28549860 28584991 + MGP_LPJ_P0053711 Ptpa protein_coding protein_coding MGP_LPJ_T0053712.1 MGP_LPJ_G0025500.1 mouse_genomes_project 2 28549914 28585178 + Ptpa protein_coding retained_intron MGP_LPJ_T0053713.1 MGP_LPJ_G0025500.1 mouse_genomes_project 2 28550020 28564723 + Ptpa protein_coding processed_transcript MGP_LPJ_T0053714.1 MGP_LPJ_G0025500.1 mouse_genomes_project 2 28564674 28575475 + Ptpa protein_coding retained_intron MGP_LPJ_T0053715.1 MGP_LPJ_G0025500.1 mouse_genomes_project 2 28575602 28584324 + MGP_LPJ_P0053715 Ptpa protein_coding nonsense_mediated_decay MGP_LPJ_T0053716.1 MGP_LPJ_G0025500.1 mouse_genomes_project 2 28579226 28584505 + MGP_LPJ_P0053716 Ptpa protein_coding protein_coding MGP_LPJ_T0053717.1 MGP_LPJ_G0025500.1 mouse_genomes_project 2 28580108 28584180 + MGP_LPJ_P0053717 Ptpa protein_coding protein_coding MGP_LPJ_T0053718.1 MGP_LPJ_G0025500.1 mouse_genomes_project 2 28580592 28584273 + Ptpa protein_coding processed_transcript MGP_LPJ_T0053719.1 MGP_LPJ_G0025500.1 mouse_genomes_project 2 28583029 28584448 + Ptpa protein_coding processed_transcript MGP_LPJ_T0053720.1 MGP_LPJ_G0025500.1 mouse_genomes_project 2 28583089 28584150 + Ptpa protein_coding processed_transcript MGP_LPJ_T0099371.1 MGP_LPJ_G0037634.1 mouse_genomes_project 2 187770548 187770652 + Gm24892 snRNA snRNA MGP_LPJ_T0003908.1 MGP_LPJ_G0003497.1 mouse_genomes_project 2 7087687 7089300 + Gm13256 antisense antisense MGP_LPJ_T0001130.1 MGP_LPJ_G0001054.1 mouse_genomes_project 2 132817734 132819677 - TEC TEC MGP_LPJ_T0054887.1 MGP_LPJ_G0025711.1 mouse_genomes_project 2 65261808 65410467 + MGP_LPJ_P0054887 Scn2a1 protein_coding protein_coding MGP_LPJ_T0054888.1 MGP_LPJ_G0025711.1 mouse_genomes_project 2 65261808 65331439 + MGP_LPJ_P0054888 Scn2a1 protein_coding protein_coding MGP_LPJ_T0054889.1 MGP_LPJ_G0025711.1 mouse_genomes_project 2 65261848 65264304 + Scn2a1 protein_coding retained_intron MGP_LPJ_T0054890.1 MGP_LPJ_G0025711.1 mouse_genomes_project 2 65309923 65313035 + Scn2a1 protein_coding retained_intron MGP_LPJ_T0054891.1 MGP_LPJ_G0025711.1 mouse_genomes_project 2 65311682 65410467 + MGP_LPJ_P0054891 Scn2a1 protein_coding protein_coding MGP_LPJ_T0054892.1 MGP_LPJ_G0025711.1 mouse_genomes_project 2 65322316 65410475 + MGP_LPJ_P0054892 Scn2a1 protein_coding protein_coding MGP_LPJ_T0054893.1 MGP_LPJ_G0025711.1 mouse_genomes_project 2 65323543 65325130 + Scn2a1 protein_coding retained_intron MGP_LPJ_T0054894.1 MGP_LPJ_G0025711.1 mouse_genomes_project 2 65361653 65372542 + MGP_LPJ_P0054894 Scn2a1 protein_coding nonsense_mediated_decay MGP_LPJ_T0054895.1 MGP_LPJ_G0025711.1 mouse_genomes_project 2 65361676 65372493 + MGP_LPJ_P0054895 Scn2a1 protein_coding nonsense_mediated_decay MGP_LPJ_T0007384.1 MGP_LPJ_G0006056.1 mouse_genomes_project 2 161642927 161643929 - Gm14174 lincRNA lincRNA MGP_LPJ_T0007401.1 MGP_LPJ_G0006071.1 mouse_genomes_project 2 171617881 171627732 - Platr29 lincRNA lincRNA MGP_LPJ_T0004175.1 MGP_LPJ_G0003692.1 mouse_genomes_project 2 169670428 169692722 + A730032A03Rik antisense antisense MGP_LPJ_T0004176.1 MGP_LPJ_G0003692.1 mouse_genomes_project 2 169688922 169692722 + A730032A03Rik antisense antisense MGP_LPJ_T0003996.1 MGP_LPJ_G0003564.1 mouse_genomes_project 2 62350651 62352155 + Gm13569 antisense antisense MGP_LPJ_T0101304.1 MGP_LPJ_G0039525.1 mouse_genomes_project 2 37838683 37843433 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101305.1 MGP_LPJ_G0039525.1 mouse_genomes_project 2 37842414 37843187 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0055700.1 MGP_LPJ_G0025973.1 mouse_genomes_project 2 89069517 89070490 - MGP_LPJ_P0055700 Olfr1156 protein_coding protein_coding MGP_LPJ_T0059760.1 MGP_LPJ_G0026961.1 mouse_genomes_project 2 188211383 188225882 - MGP_LPJ_P0059760 Zfp512b protein_coding protein_coding MGP_LPJ_T0059761.1 MGP_LPJ_G0026961.1 mouse_genomes_project 2 188211385 188223999 - MGP_LPJ_P0059761 Zfp512b protein_coding protein_coding MGP_LPJ_T0059762.1 MGP_LPJ_G0026961.1 mouse_genomes_project 2 188217656 188219470 - Zfp512b protein_coding retained_intron MGP_LPJ_T0059763.1 MGP_LPJ_G0026961.1 mouse_genomes_project 2 188218244 188219376 - MGP_LPJ_P0059763 Zfp512b protein_coding protein_coding MGP_LPJ_T0059764.1 MGP_LPJ_G0026961.1 mouse_genomes_project 2 188218250 188219428 - MGP_LPJ_P0059764 Zfp512b protein_coding protein_coding MGP_LPJ_T0059765.1 MGP_LPJ_G0026961.1 mouse_genomes_project 2 188219787 188220725 - Zfp512b protein_coding retained_intron MGP_LPJ_T0059766.1 MGP_LPJ_G0026961.1 mouse_genomes_project 2 188220183 188221819 - MGP_LPJ_P0059766 Zfp512b protein_coding nonsense_mediated_decay MGP_LPJ_T0059767.1 MGP_LPJ_G0026961.1 mouse_genomes_project 2 188221145 188222366 - Zfp512b protein_coding processed_transcript MGP_LPJ_T0059768.1 MGP_LPJ_G0026961.1 mouse_genomes_project 2 188223102 188225837 - Zfp512b protein_coding processed_transcript MGP_LPJ_T0059769.1 MGP_LPJ_G0026961.1 mouse_genomes_project 2 188223601 188225882 - MGP_LPJ_P0059769 Zfp512b protein_coding protein_coding MGP_LPJ_T0001074.1 MGP_LPJ_G0000999.1 mouse_genomes_project 2 11439300 11443264 - TEC TEC MGP_LPJ_T0010436.1 MGP_LPJ_G0008554.1 mouse_genomes_project 2 56146589 56146686 + Mir195b miRNA miRNA MGP_LPJ_T0057857.1 MGP_LPJ_G0026514.1 mouse_genomes_project 2 148040722 148081500 - MGP_LPJ_P0057857 Bfsp1 protein_coding protein_coding MGP_LPJ_T0057858.1 MGP_LPJ_G0026514.1 mouse_genomes_project 2 148040722 148081270 - MGP_LPJ_P0057858 Bfsp1 protein_coding protein_coding MGP_LPJ_T0056524.1 MGP_LPJ_G0026211.1 mouse_genomes_project 2 114601109 114602072 - MGP_LPJ_P0056524 Olfr1308 protein_coding protein_coding MGP_LPJ_T0100576.1 MGP_LPJ_G0038839.1 mouse_genomes_project 2 31350666 31350796 + Snora65 snoRNA snoRNA MGP_LPJ_T0052296.1 MGP_LPJ_G0025257.1 mouse_genomes_project 2 2975080 3025836 - MGP_LPJ_P0052296 Dhtkd1 protein_coding protein_coding MGP_LPJ_T0052297.1 MGP_LPJ_G0025257.1 mouse_genomes_project 2 2976190 3025787 - MGP_LPJ_P0052297 Dhtkd1 protein_coding protein_coding MGP_LPJ_T0052298.1 MGP_LPJ_G0025257.1 mouse_genomes_project 2 2984414 2995502 - Dhtkd1 protein_coding processed_transcript MGP_LPJ_T0100622.1 MGP_LPJ_G0038885.1 mouse_genomes_project 2 148501163 148501401 - Snord17 snoRNA snoRNA MGP_LPJ_T0055233.1 MGP_LPJ_G0025776.1 mouse_genomes_project 2 74831466 74838050 - MGP_LPJ_P0055233 Evx2 protein_coding protein_coding MGP_LPJ_T0055234.1 MGP_LPJ_G0025776.1 mouse_genomes_project 2 74834109 74837912 - MGP_LPJ_P0055234 Evx2 protein_coding protein_coding MGP_LPJ_T0059063.1 MGP_LPJ_G0026815.1 mouse_genomes_project 2 170406021 170423930 - MGP_LPJ_P0059063 Pltp protein_coding protein_coding MGP_LPJ_T0059064.1 MGP_LPJ_G0026815.1 mouse_genomes_project 2 170406021 170424008 - MGP_LPJ_P0059064 Pltp protein_coding protein_coding MGP_LPJ_T0059065.1 MGP_LPJ_G0026815.1 mouse_genomes_project 2 170406021 170423839 - MGP_LPJ_P0059065 Pltp protein_coding protein_coding MGP_LPJ_T0059066.1 MGP_LPJ_G0026815.1 mouse_genomes_project 2 170413147 170423093 - Pltp protein_coding retained_intron MGP_LPJ_T0059067.1 MGP_LPJ_G0026815.1 mouse_genomes_project 2 170418780 170423923 - Pltp protein_coding processed_transcript MGP_LPJ_T0059068.1 MGP_LPJ_G0026815.1 mouse_genomes_project 2 170418917 170423917 - MGP_LPJ_P0059068 Pltp protein_coding protein_coding MGP_LPJ_T0059069.1 MGP_LPJ_G0026815.1 mouse_genomes_project 2 170420612 170423927 - MGP_LPJ_P0059069 Pltp protein_coding protein_coding MGP_LPJ_T0059551.1 MGP_LPJ_G0026924.1 mouse_genomes_project 2 186791865 186804128 - MGP_LPJ_P0059551 Rbbp8nl protein_coding protein_coding MGP_LPJ_T0055840.1 MGP_LPJ_G0026071.1 mouse_genomes_project 2 92266959 92306019 + MGP_LPJ_P0055840 Agbl2 protein_coding protein_coding MGP_LPJ_T0055841.1 MGP_LPJ_G0026071.1 mouse_genomes_project 2 92266959 92325889 + MGP_LPJ_P0055841 Agbl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0055842.1 MGP_LPJ_G0026071.1 mouse_genomes_project 2 92266960 92299443 + MGP_LPJ_P0055842 Agbl2 protein_coding protein_coding MGP_LPJ_T0055843.1 MGP_LPJ_G0026071.1 mouse_genomes_project 2 92266976 92305006 + MGP_LPJ_P0055843 Agbl2 protein_coding protein_coding MGP_LPJ_T0055844.1 MGP_LPJ_G0026071.1 mouse_genomes_project 2 92268154 92303043 + MGP_LPJ_P0055844 Agbl2 protein_coding protein_coding MGP_LPJ_T0055845.1 MGP_LPJ_G0026071.1 mouse_genomes_project 2 92268181 92319399 + Agbl2 protein_coding processed_transcript MGP_LPJ_T0055846.1 MGP_LPJ_G0026071.1 mouse_genomes_project 2 92268489 92305006 + MGP_LPJ_P0055846 Agbl2 protein_coding protein_coding MGP_LPJ_T0055847.1 MGP_LPJ_G0026071.1 mouse_genomes_project 2 92268942 92304287 + MGP_LPJ_P0055847 Agbl2 protein_coding unknown_likely_coding MGP_LPJ_T0055848.1 MGP_LPJ_G0026071.1 mouse_genomes_project 2 92268976 92286219 + Agbl2 protein_coding processed_transcript MGP_LPJ_T0007244.1 MGP_LPJ_G0005943.1 mouse_genomes_project 2 74326545 74341165 + Gm13667 lincRNA lincRNA MGP_LPJ_T0013428.1 MGP_LPJ_G0011519.1 mouse_genomes_project 2 21403019 21403923 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007355.1 MGP_LPJ_G0006033.1 mouse_genomes_project 2 141851161 141857947 - Gm14062 lincRNA lincRNA MGP_LPJ_T0056750.1 MGP_LPJ_G0026274.1 mouse_genomes_project 2 122289641 122301739 + MGP_LPJ_P0056750 Spint1 protein_coding protein_coding MGP_LPJ_T0056751.1 MGP_LPJ_G0026274.1 mouse_genomes_project 2 122289756 122301420 + MGP_LPJ_P0056751 Spint1 protein_coding protein_coding MGP_LPJ_T0056752.1 MGP_LPJ_G0026274.1 mouse_genomes_project 2 122289832 122301752 + MGP_LPJ_P0056752 Spint1 protein_coding protein_coding MGP_LPJ_T0056753.1 MGP_LPJ_G0026274.1 mouse_genomes_project 2 122298592 122301127 + Spint1 protein_coding retained_intron MGP_LPJ_T0056754.1 MGP_LPJ_G0026274.1 mouse_genomes_project 2 122300429 122301274 + Spint1 protein_coding retained_intron MGP_LPJ_T0054241.1 MGP_LPJ_G0025580.1 mouse_genomes_project 2 33658220 33680805 + MGP_LPJ_P0054241 Cntrl protein_coding protein_coding MGP_LPJ_T0054242.1 MGP_LPJ_G0025580.1 mouse_genomes_project 2 33658220 33729992 + MGP_LPJ_P0054242 Cntrl protein_coding protein_coding MGP_LPJ_T0054243.1 MGP_LPJ_G0025580.1 mouse_genomes_project 2 33658220 33730704 + MGP_LPJ_P0054243 Cntrl protein_coding protein_coding MGP_LPJ_T0054244.1 MGP_LPJ_G0025580.1 mouse_genomes_project 2 33658347 33730304 + MGP_LPJ_P0054244 Cntrl protein_coding protein_coding MGP_LPJ_T0054245.1 MGP_LPJ_G0025580.1 mouse_genomes_project 2 33675648 33699523 + MGP_LPJ_P0054245 Cntrl protein_coding protein_coding MGP_LPJ_T0054246.1 MGP_LPJ_G0025580.1 mouse_genomes_project 2 33682311 33730704 + MGP_LPJ_P0054246 Cntrl protein_coding protein_coding MGP_LPJ_T0054247.1 MGP_LPJ_G0025580.1 mouse_genomes_project 2 33682311 33712488 + MGP_LPJ_P0054247 Cntrl protein_coding protein_coding MGP_LPJ_T0054248.1 MGP_LPJ_G0025580.1 mouse_genomes_project 2 33682335 33699523 + MGP_LPJ_P0054248 Cntrl protein_coding protein_coding MGP_LPJ_T0054249.1 MGP_LPJ_G0025580.1 mouse_genomes_project 2 33682335 33687759 + MGP_LPJ_P0054249 Cntrl protein_coding protein_coding MGP_LPJ_T0054250.1 MGP_LPJ_G0025580.1 mouse_genomes_project 2 33696947 33699523 + MGP_LPJ_P0054250 Cntrl protein_coding protein_coding MGP_LPJ_T0054251.1 MGP_LPJ_G0025580.1 mouse_genomes_project 2 33712159 33717612 + MGP_LPJ_P0054251 Cntrl protein_coding nonsense_mediated_decay MGP_LPJ_T0054252.1 MGP_LPJ_G0025580.1 mouse_genomes_project 2 33713569 33718040 + Cntrl protein_coding retained_intron MGP_LPJ_T0054253.1 MGP_LPJ_G0025580.1 mouse_genomes_project 2 33727129 33730693 + Cntrl protein_coding retained_intron MGP_LPJ_T0054360.1 MGP_LPJ_G0025623.1 mouse_genomes_project 2 35930908 35940571 - MGP_LPJ_P0054360 Pdcl protein_coding protein_coding MGP_LPJ_T0054361.1 MGP_LPJ_G0025623.1 mouse_genomes_project 2 35931422 35940492 - MGP_LPJ_P0054361 Pdcl protein_coding protein_coding MGP_LPJ_T0054362.1 MGP_LPJ_G0025623.1 mouse_genomes_project 2 35932953 35940428 - MGP_LPJ_P0054362 Pdcl protein_coding nonsense_mediated_decay MGP_LPJ_T0054363.1 MGP_LPJ_G0025623.1 mouse_genomes_project 2 35932992 35940435 - MGP_LPJ_P0054363 Pdcl protein_coding protein_coding MGP_LPJ_T0013772.1 MGP_LPJ_G0011863.1 mouse_genomes_project 2 153872191 153872910 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100580.1 MGP_LPJ_G0038843.1 mouse_genomes_project 2 41608839 41608972 + Gm24350 snoRNA snoRNA MGP_LPJ_T0052747.1 MGP_LPJ_G0025333.1 mouse_genomes_project 2 21780748 21809008 - MGP_LPJ_P0052747 Tbpl2 protein_coding protein_coding MGP_LPJ_T0052748.1 MGP_LPJ_G0025333.1 mouse_genomes_project 2 21780942 21808945 - MGP_LPJ_P0052748 Tbpl2 protein_coding protein_coding MGP_LPJ_T0013419.1 MGP_LPJ_G0011510.1 mouse_genomes_project 2 17622187 17622986 - processed_pseudogene processed_pseudogene MGP_LPJ_T0057405.1 MGP_LPJ_G0026409.1 mouse_genomes_project 2 131682222 131686200 + Bcl2l11 protein_coding processed_transcript MGP_LPJ_T0057406.1 MGP_LPJ_G0026409.1 mouse_genomes_project 2 131682222 131687680 + MGP_LPJ_P0057406 Bcl2l11 protein_coding protein_coding MGP_LPJ_T0057407.1 MGP_LPJ_G0026409.1 mouse_genomes_project 2 131682222 131717026 + MGP_LPJ_P0057407 Bcl2l11 protein_coding protein_coding MGP_LPJ_T0057408.1 MGP_LPJ_G0026409.1 mouse_genomes_project 2 131682223 131718612 + MGP_LPJ_P0057408 Bcl2l11 protein_coding protein_coding MGP_LPJ_T0057409.1 MGP_LPJ_G0026409.1 mouse_genomes_project 2 131682224 131714519 + MGP_LPJ_P0057409 Bcl2l11 protein_coding protein_coding MGP_LPJ_T0057410.1 MGP_LPJ_G0026409.1 mouse_genomes_project 2 131682234 131717293 + MGP_LPJ_P0057410 Bcl2l11 protein_coding protein_coding MGP_LPJ_T0057411.1 MGP_LPJ_G0026409.1 mouse_genomes_project 2 131683759 131686330 + Bcl2l11 protein_coding processed_transcript MGP_LPJ_T0057412.1 MGP_LPJ_G0026409.1 mouse_genomes_project 2 131684315 131684922 + Bcl2l11 protein_coding processed_transcript MGP_LPJ_T0007202.1 MGP_LPJ_G0005907.1 mouse_genomes_project 2 44252065 44299862 + Gm13479 lincRNA lincRNA MGP_LPJ_T0013402.1 MGP_LPJ_G0011493.1 mouse_genomes_project 2 12928645 12929075 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013756.1 MGP_LPJ_G0011847.1 mouse_genomes_project 2 149018876 149021127 + processed_pseudogene processed_pseudogene MGP_LPJ_T0059187.1 MGP_LPJ_G0026835.1 mouse_genomes_project 2 172254158 172416111 - MGP_LPJ_P0059187 Prex1 protein_coding protein_coding MGP_LPJ_T0059188.1 MGP_LPJ_G0026835.1 mouse_genomes_project 2 172254776 172329009 - MGP_LPJ_P0059188 Prex1 protein_coding protein_coding MGP_LPJ_T0059189.1 MGP_LPJ_G0026835.1 mouse_genomes_project 2 172254782 172271278 - MGP_LPJ_P0059189 Prex1 protein_coding protein_coding MGP_LPJ_T0059190.1 MGP_LPJ_G0026835.1 mouse_genomes_project 2 172256133 172262163 - Prex1 protein_coding processed_transcript MGP_LPJ_T0059191.1 MGP_LPJ_G0026835.1 mouse_genomes_project 2 172291156 172294488 - Prex1 protein_coding retained_intron MGP_LPJ_T0059192.1 MGP_LPJ_G0026835.1 mouse_genomes_project 2 172323504 172404185 - Prex1 protein_coding processed_transcript MGP_LPJ_T0059193.1 MGP_LPJ_G0026835.1 mouse_genomes_project 2 172335047 172416070 - Prex1 protein_coding retained_intron MGP_LPJ_T0059194.1 MGP_LPJ_G0026835.1 mouse_genomes_project 2 172335260 172415881 - Prex1 protein_coding retained_intron MGP_LPJ_T0007199.1 MGP_LPJ_G0005904.1 mouse_genomes_project 2 35678751 35679628 - Gm13434 lincRNA lincRNA MGP_LPJ_T0055509.1 MGP_LPJ_G0025841.1 mouse_genomes_project 2 85290330 85304551 + MGP_LPJ_P0055509 Ube2l6 protein_coding protein_coding MGP_LPJ_T0055510.1 MGP_LPJ_G0025841.1 mouse_genomes_project 2 85290336 85301024 + MGP_LPJ_P0055510 Ube2l6 protein_coding protein_coding MGP_LPJ_T0055511.1 MGP_LPJ_G0025841.1 mouse_genomes_project 2 85297332 85304708 + Ube2l6 protein_coding processed_transcript MGP_LPJ_T0055512.1 MGP_LPJ_G0025841.1 mouse_genomes_project 2 85300861 85303755 + Ube2l6 protein_coding retained_intron MGP_LPJ_T0055650.1 MGP_LPJ_G0025933.1 mouse_genomes_project 2 88069955 88070894 - MGP_LPJ_P0055650 Olfr1107 protein_coding protein_coding MGP_LPJ_T0010376.1 MGP_LPJ_G0008494.1 mouse_genomes_project 2 7782879 7782982 + Gm22239 miRNA miRNA MGP_LPJ_T0013618.1 MGP_LPJ_G0011709.1 mouse_genomes_project 2 88645190 88646040 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098242.1 MGP_LPJ_G0036523.1 mouse_genomes_project 2 171848708 171848813 + Gm22687 rRNA rRNA MGP_LPJ_T0010404.1 MGP_LPJ_G0008522.1 mouse_genomes_project 2 23272562 23272618 + Mir3087 miRNA miRNA MGP_LPJ_T0099320.1 MGP_LPJ_G0037583.1 mouse_genomes_project 2 23158288 23158383 + Gm25220 snRNA snRNA MGP_LPJ_T0013470.1 MGP_LPJ_G0011561.1 mouse_genomes_project 2 37957873 37958638 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003985.1 MGP_LPJ_G0003557.1 mouse_genomes_project 2 51595621 51597966 + antisense antisense MGP_LPJ_T0058320.1 MGP_LPJ_G0026647.1 mouse_genomes_project 2 159038494 159055140 + MGP_LPJ_P0058320 Bpifb5 protein_coding protein_coding MGP_LPJ_T0010510.1 MGP_LPJ_G0008628.1 mouse_genomes_project 2 186766695 186766771 + Mir3091 miRNA miRNA MGP_LPJ_T0054265.1 MGP_LPJ_G0025582.1 mouse_genomes_project 2 33814799 33866114 + MGP_LPJ_P0054265 Gsn protein_coding protein_coding MGP_LPJ_T0054266.1 MGP_LPJ_G0025582.1 mouse_genomes_project 2 33814803 33861475 + MGP_LPJ_P0054266 Gsn protein_coding protein_coding MGP_LPJ_T0054267.1 MGP_LPJ_G0025582.1 mouse_genomes_project 2 33814815 33851793 + MGP_LPJ_P0054267 Gsn protein_coding protein_coding MGP_LPJ_T0054268.1 MGP_LPJ_G0025582.1 mouse_genomes_project 2 33814828 33851791 + MGP_LPJ_P0054268 Gsn protein_coding protein_coding MGP_LPJ_T0054269.1 MGP_LPJ_G0025582.1 mouse_genomes_project 2 33814868 33848671 + MGP_LPJ_P0054269 Gsn protein_coding protein_coding MGP_LPJ_T0054270.1 MGP_LPJ_G0025582.1 mouse_genomes_project 2 33840605 33866116 + MGP_LPJ_P0054270 Gsn protein_coding protein_coding MGP_LPJ_T0054271.1 MGP_LPJ_G0025582.1 mouse_genomes_project 2 33840738 33843251 + Gsn protein_coding retained_intron MGP_LPJ_T0013730.1 MGP_LPJ_G0011821.1 mouse_genomes_project 2 136524775 136525635 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007211.1 MGP_LPJ_G0005915.1 mouse_genomes_project 2 50392429 50392910 + Gm28639 lincRNA lincRNA MGP_LPJ_T0056768.1 MGP_LPJ_G0026281.1 mouse_genomes_project 2 122622856 122663192 + MGP_LPJ_P0056768 Chp1 protein_coding protein_coding MGP_LPJ_T0056769.1 MGP_LPJ_G0026281.1 mouse_genomes_project 2 122622947 122646958 + Chp1 protein_coding retained_intron MGP_LPJ_T0056770.1 MGP_LPJ_G0026281.1 mouse_genomes_project 2 122622986 122660192 + MGP_LPJ_P0056770 Chp1 protein_coding protein_coding MGP_LPJ_T0056771.1 MGP_LPJ_G0026281.1 mouse_genomes_project 2 122641824 122660448 + Chp1 protein_coding retained_intron MGP_LPJ_T0053442.1 MGP_LPJ_G0025462.1 mouse_genomes_project 2 26723536 26840230 + MGP_LPJ_P0053442 Ak8 protein_coding protein_coding MGP_LPJ_T0053443.1 MGP_LPJ_G0025462.1 mouse_genomes_project 2 26723579 26759511 + Ak8 protein_coding processed_transcript MGP_LPJ_T0053444.1 MGP_LPJ_G0025462.1 mouse_genomes_project 2 26768347 26786226 + Ak8 protein_coding processed_transcript MGP_LPJ_T0055641.1 MGP_LPJ_G0025924.1 mouse_genomes_project 2 87799077 87800067 - MGP_LPJ_P0055641 protein_coding protein_coding MGP_LPJ_T0102005.1 MGP_LPJ_G0040042.1 mouse_genomes_project 2 20238954 20243145 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0007241.1 MGP_LPJ_G0005940.1 mouse_genomes_project 2 74073033 74082124 + Gm10822 lincRNA lincRNA MGP_LPJ_T0100637.1 MGP_LPJ_G0038900.1 mouse_genomes_project 2 163541706 163541839 + Gm25187 snoRNA snoRNA MGP_LPJ_T0056006.1 MGP_LPJ_G0026093.1 mouse_genomes_project 2 93216764 93239550 + MGP_LPJ_P0056006 Arhgap1 protein_coding protein_coding MGP_LPJ_T0056007.1 MGP_LPJ_G0026093.1 mouse_genomes_project 2 93217022 93239550 + MGP_LPJ_P0056007 Arhgap1 protein_coding protein_coding MGP_LPJ_T0056008.1 MGP_LPJ_G0026093.1 mouse_genomes_project 2 93217126 93239550 + MGP_LPJ_P0056008 Arhgap1 protein_coding protein_coding MGP_LPJ_T0056009.1 MGP_LPJ_G0026093.1 mouse_genomes_project 2 93218402 93221435 + Arhgap1 protein_coding processed_transcript MGP_LPJ_T0056010.1 MGP_LPJ_G0026093.1 mouse_genomes_project 2 93218402 93221437 + Arhgap1 protein_coding processed_transcript MGP_LPJ_T0056011.1 MGP_LPJ_G0026093.1 mouse_genomes_project 2 93218651 93235202 + Arhgap1 protein_coding processed_transcript MGP_LPJ_T0056012.1 MGP_LPJ_G0026093.1 mouse_genomes_project 2 93220112 93239526 + MGP_LPJ_P0056012 Arhgap1 protein_coding protein_coding MGP_LPJ_T0056013.1 MGP_LPJ_G0026093.1 mouse_genomes_project 2 93235409 93239165 + Arhgap1 protein_coding processed_transcript MGP_LPJ_T0056014.1 MGP_LPJ_G0026093.1 mouse_genomes_project 2 93236824 93237941 + Arhgap1 protein_coding processed_transcript MGP_LPJ_T0055745.1 MGP_LPJ_G0026016.1 mouse_genomes_project 2 90282557 90290223 - MGP_LPJ_P0055745 protein_coding protein_coding MGP_LPJ_T0055746.1 MGP_LPJ_G0026016.1 mouse_genomes_project 2 90283056 90290198 - protein_coding processed_transcript MGP_LPJ_T0055747.1 MGP_LPJ_G0026016.1 mouse_genomes_project 2 90283273 90290217 - protein_coding processed_transcript MGP_LPJ_T0013545.1 MGP_LPJ_G0011636.1 mouse_genomes_project 2 66556794 66558308 + processed_pseudogene processed_pseudogene MGP_LPJ_T0059828.1 MGP_LPJ_G0026972.1 mouse_genomes_project 2 188553251 188554562 + MGP_LPJ_P0059828 protein_coding protein_coding MGP_LPJ_T0013807.1 MGP_LPJ_G0011898.1 mouse_genomes_project 2 163636264 163636456 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013496.1 MGP_LPJ_G0011587.1 mouse_genomes_project 2 49813520 49813932 - processed_pseudogene processed_pseudogene MGP_LPJ_T0052577.1 MGP_LPJ_G0025303.1 mouse_genomes_project 2 15583612 15587509 - Skida1 protein_coding processed_transcript MGP_LPJ_T0052578.1 MGP_LPJ_G0025303.1 mouse_genomes_project 2 15587019 15591979 - MGP_LPJ_P0052578 Skida1 protein_coding protein_coding MGP_LPJ_T0052579.1 MGP_LPJ_G0025303.1 mouse_genomes_project 2 15588189 15591388 - MGP_LPJ_P0052579 Skida1 protein_coding protein_coding MGP_LPJ_T0052580.1 MGP_LPJ_G0025303.1 mouse_genomes_project 2 15590654 15591712 - MGP_LPJ_P0052580 Skida1 protein_coding protein_coding MGP_LPJ_T0052581.1 MGP_LPJ_G0025303.1 mouse_genomes_project 2 15591082 15591959 - MGP_LPJ_P0052581 Skida1 protein_coding protein_coding MGP_LPJ_T0004091.1 MGP_LPJ_G0003629.1 mouse_genomes_project 2 128689462 128692051 + A530010F05Rik antisense antisense MGP_LPJ_T0055766.1 MGP_LPJ_G0026033.1 mouse_genomes_project 2 90633077 90633995 - MGP_LPJ_P0055766 Olfr1233 protein_coding protein_coding MGP_LPJ_T0056361.1 MGP_LPJ_G0026157.1 mouse_genomes_project 2 106814790 106896478 + MGP_LPJ_P0056361 Cstf3 protein_coding protein_coding MGP_LPJ_T0056362.1 MGP_LPJ_G0026157.1 mouse_genomes_project 2 106814799 106839026 + Cstf3 protein_coding retained_intron MGP_LPJ_T0056363.1 MGP_LPJ_G0026157.1 mouse_genomes_project 2 106814909 106837033 + Cstf3 protein_coding retained_intron MGP_LPJ_T0056364.1 MGP_LPJ_G0026157.1 mouse_genomes_project 2 106852363 106895968 + MGP_LPJ_P0056364 Cstf3 protein_coding unknown_likely_coding MGP_LPJ_T0056365.1 MGP_LPJ_G0026157.1 mouse_genomes_project 2 106886726 106894487 + Cstf3 protein_coding processed_transcript MGP_LPJ_T0056367.1 MGP_LPJ_G0026157.1 mouse_genomes_project 2 106894186 106895228 + Cstf3 protein_coding processed_transcript MGP_LPJ_T0056368.1 MGP_LPJ_G0026157.1 mouse_genomes_project 2 106894714 106895788 + Cstf3 protein_coding processed_transcript MGP_LPJ_T0010417.1 MGP_LPJ_G0008535.1 mouse_genomes_project 2 29861135 29861199 + Mir6998 miRNA miRNA MGP_LPJ_T0055744.1 MGP_LPJ_G0026015.1 mouse_genomes_project 2 90282557 90283493 - MGP_LPJ_P0055744 protein_coding protein_coding MGP_LPJ_T0058541.1 MGP_LPJ_G0026692.1 mouse_genomes_project 2 161069841 161111946 - MGP_LPJ_P0058541 Cpne1 protein_coding protein_coding MGP_LPJ_T0058542.1 MGP_LPJ_G0026692.1 mouse_genomes_project 2 161069844 161111899 - Cpne1 protein_coding retained_intron MGP_LPJ_T0058543.1 MGP_LPJ_G0026692.1 mouse_genomes_project 2 161069844 161111950 - MGP_LPJ_P0058543 Cpne1 protein_coding protein_coding MGP_LPJ_T0058546.1 MGP_LPJ_G0026692.1 mouse_genomes_project 2 161069846 161111954 - MGP_LPJ_P0058546 Cpne1 protein_coding protein_coding MGP_LPJ_T0058547.1 MGP_LPJ_G0026692.1 mouse_genomes_project 2 161071334 161072297 - Cpne1 protein_coding processed_transcript MGP_LPJ_T0058548.1 MGP_LPJ_G0026692.1 mouse_genomes_project 2 161071356 161111912 - MGP_LPJ_P0058548 Cpne1 protein_coding protein_coding MGP_LPJ_T0058549.1 MGP_LPJ_G0026692.1 mouse_genomes_project 2 161071390 161074252 - MGP_LPJ_P0058549 Cpne1 protein_coding protein_coding MGP_LPJ_T0058550.1 MGP_LPJ_G0026692.1 mouse_genomes_project 2 161071395 161074277 - Cpne1 protein_coding retained_intron MGP_LPJ_T0058551.1 MGP_LPJ_G0026692.1 mouse_genomes_project 2 161071509 161111915 - MGP_LPJ_P0058551 Cpne1 protein_coding nonsense_mediated_decay MGP_LPJ_T0058552.1 MGP_LPJ_G0026692.1 mouse_genomes_project 2 161071514 161076161 - MGP_LPJ_P0058552 Cpne1 protein_coding nonsense_mediated_decay MGP_LPJ_T0058553.1 MGP_LPJ_G0026692.1 mouse_genomes_project 2 161072099 161074553 - Cpne1 protein_coding retained_intron MGP_LPJ_T0058554.1 MGP_LPJ_G0026692.1 mouse_genomes_project 2 161072202 161111976 - MGP_LPJ_P0058554 Cpne1 protein_coding protein_coding MGP_LPJ_T0058555.1 MGP_LPJ_G0026692.1 mouse_genomes_project 2 161075399 161111920 - MGP_LPJ_P0058555 Cpne1 protein_coding protein_coding MGP_LPJ_T0058556.1 MGP_LPJ_G0026692.1 mouse_genomes_project 2 161075420 161076592 - Cpne1 protein_coding retained_intron MGP_LPJ_T0058557.1 MGP_LPJ_G0026692.1 mouse_genomes_project 2 161076167 161111970 - MGP_LPJ_P0058557 Cpne1 protein_coding protein_coding MGP_LPJ_T0058558.1 MGP_LPJ_G0026692.1 mouse_genomes_project 2 161076574 161111920 - MGP_LPJ_P0058558 Cpne1 protein_coding protein_coding MGP_LPJ_T0058559.1 MGP_LPJ_G0026692.1 mouse_genomes_project 2 161076900 161111874 - MGP_LPJ_P0058559 Cpne1 protein_coding protein_coding MGP_LPJ_T0007163.1 MGP_LPJ_G0005879.1 mouse_genomes_project 2 20422314 20430289 + 1700092C17Rik lincRNA lincRNA MGP_LPJ_T0007164.1 MGP_LPJ_G0005879.1 mouse_genomes_project 2 20429987 20430257 + 1700092C17Rik lincRNA lincRNA MGP_LPJ_T0003962.1 MGP_LPJ_G0003539.1 mouse_genomes_project 2 30542170 30545771 - Gm13610 antisense antisense MGP_LPJ_T0017777.1 MGP_LPJ_G0015370.1 mouse_genomes_project 2 116791630 116850312 + A530058N18Rik processed_transcript antisense MGP_LPJ_T0017778.1 MGP_LPJ_G0015370.1 mouse_genomes_project 2 116791634 116842979 + A530058N18Rik processed_transcript processed_transcript MGP_LPJ_T0056696.1 MGP_LPJ_G0026261.1 mouse_genomes_project 2 121895240 121918036 + MGP_LPJ_P0056696 Ivd protein_coding protein_coding MGP_LPJ_T0056697.1 MGP_LPJ_G0026261.1 mouse_genomes_project 2 121895314 121903742 + Ivd protein_coding retained_intron MGP_LPJ_T0056698.1 MGP_LPJ_G0026261.1 mouse_genomes_project 2 121904722 121905592 + Ivd protein_coding processed_transcript MGP_LPJ_T0056699.1 MGP_LPJ_G0026261.1 mouse_genomes_project 2 121905617 121910275 + Ivd protein_coding processed_transcript MGP_LPJ_T0056700.1 MGP_LPJ_G0026261.1 mouse_genomes_project 2 121906083 121908083 + Ivd protein_coding retained_intron MGP_LPJ_T0056701.1 MGP_LPJ_G0026261.1 mouse_genomes_project 2 121907626 121915658 + Ivd protein_coding processed_transcript MGP_LPJ_T0056702.1 MGP_LPJ_G0026261.1 mouse_genomes_project 2 121909020 121916093 + Ivd protein_coding processed_transcript MGP_LPJ_T0056703.1 MGP_LPJ_G0026261.1 mouse_genomes_project 2 121909748 121913016 + Ivd protein_coding processed_transcript MGP_LPJ_T0058805.1 MGP_LPJ_G0026737.1 mouse_genomes_project 2 165592795 165595030 - MGP_LPJ_P0058805 Gm826 protein_coding protein_coding MGP_LPJ_T0058806.1 MGP_LPJ_G0026737.1 mouse_genomes_project 2 165593146 165616307 - Gm826 protein_coding processed_transcript MGP_LPJ_T0058807.1 MGP_LPJ_G0026737.1 mouse_genomes_project 2 165593263 165608729 - MGP_LPJ_P0058807 Gm826 protein_coding protein_coding MGP_LPJ_T0052705.1 MGP_LPJ_G0025325.1 mouse_genomes_project 2 20610145 20711536 - MGP_LPJ_P0052705 Abi1 protein_coding protein_coding MGP_LPJ_T0052706.1 MGP_LPJ_G0025325.1 mouse_genomes_project 2 20610145 20711582 - MGP_LPJ_P0052706 Abi1 protein_coding protein_coding MGP_LPJ_T0052707.1 MGP_LPJ_G0025325.1 mouse_genomes_project 2 20610158 20711582 - MGP_LPJ_P0052707 Abi1 protein_coding protein_coding MGP_LPJ_T0052708.1 MGP_LPJ_G0025325.1 mouse_genomes_project 2 20610380 20711463 - MGP_LPJ_P0052708 Abi1 protein_coding protein_coding MGP_LPJ_T0052709.1 MGP_LPJ_G0025325.1 mouse_genomes_project 2 20610436 20711528 - MGP_LPJ_P0052709 Abi1 protein_coding protein_coding MGP_LPJ_T0052710.1 MGP_LPJ_G0025325.1 mouse_genomes_project 2 20610436 20711445 - MGP_LPJ_P0052710 Abi1 protein_coding protein_coding MGP_LPJ_T0052711.1 MGP_LPJ_G0025325.1 mouse_genomes_project 2 20610436 20711478 - MGP_LPJ_P0052711 Abi1 protein_coding protein_coding MGP_LPJ_T0052712.1 MGP_LPJ_G0025325.1 mouse_genomes_project 2 20610441 20711526 - MGP_LPJ_P0052712 Abi1 protein_coding protein_coding MGP_LPJ_T0052713.1 MGP_LPJ_G0025325.1 mouse_genomes_project 2 20610441 20711571 - MGP_LPJ_P0052713 Abi1 protein_coding protein_coding MGP_LPJ_T0052714.1 MGP_LPJ_G0025325.1 mouse_genomes_project 2 20610964 20711481 - MGP_LPJ_P0052714 Abi1 protein_coding protein_coding MGP_LPJ_T0052715.1 MGP_LPJ_G0025325.1 mouse_genomes_project 2 20611305 20711560 - MGP_LPJ_P0052715 Abi1 protein_coding protein_coding MGP_LPJ_T0052716.1 MGP_LPJ_G0025325.1 mouse_genomes_project 2 20611880 20617131 - Abi1 protein_coding retained_intron MGP_LPJ_T0052717.1 MGP_LPJ_G0025325.1 mouse_genomes_project 2 20611884 20620203 - Abi1 protein_coding retained_intron MGP_LPJ_T0052718.1 MGP_LPJ_G0025325.1 mouse_genomes_project 2 20616603 20630745 - Abi1 protein_coding retained_intron MGP_LPJ_T0052719.1 MGP_LPJ_G0025325.1 mouse_genomes_project 2 20620126 20632504 - Abi1 protein_coding retained_intron MGP_LPJ_T0007333.1 MGP_LPJ_G0006014.1 mouse_genomes_project 2 128104746 128107225 + Gm13994 lincRNA lincRNA MGP_LPJ_T0007223.1 MGP_LPJ_G0005925.1 mouse_genomes_project 2 60420051 60431860 - Gm13582 lincRNA lincRNA MGP_LPJ_T0054384.1 MGP_LPJ_G0025628.1 mouse_genomes_project 2 36070016 36249510 - MGP_LPJ_P0054384 protein_coding nonsense_mediated_decay MGP_LPJ_T0054390.1 MGP_LPJ_G0025628.1 mouse_genomes_project 2 36158942 36182860 - protein_coding processed_transcript MGP_LPJ_T0054391.1 MGP_LPJ_G0025628.1 mouse_genomes_project 2 36168480 36175445 - MGP_LPJ_P0054391 protein_coding nonsense_mediated_decay MGP_LPJ_T0054392.1 MGP_LPJ_G0025628.1 mouse_genomes_project 2 36172972 36251750 - MGP_LPJ_P0054392 protein_coding unknown_likely_coding MGP_LPJ_T0054393.1 MGP_LPJ_G0025628.1 mouse_genomes_project 2 36234235 36309837 - protein_coding processed_transcript MGP_LPJ_T0054394.1 MGP_LPJ_G0025628.1 mouse_genomes_project 2 36234764 36261123 - MGP_LPJ_P0054394 protein_coding protein_coding MGP_LPJ_T0054395.1 MGP_LPJ_G0025628.1 mouse_genomes_project 2 36240027 36310348 - MGP_LPJ_P0054395 protein_coding protein_coding MGP_LPJ_T0054396.1 MGP_LPJ_G0025628.1 mouse_genomes_project 2 36249410 36309638 - protein_coding processed_transcript MGP_LPJ_T0057117.1 MGP_LPJ_G0026336.1 mouse_genomes_project 2 125079199 125150692 + MGP_LPJ_P0057117 Casc4 protein_coding protein_coding MGP_LPJ_T0057118.1 MGP_LPJ_G0026336.1 mouse_genomes_project 2 125079199 125150692 + MGP_LPJ_P0057118 Casc4 protein_coding protein_coding MGP_LPJ_T0057119.1 MGP_LPJ_G0026336.1 mouse_genomes_project 2 125079358 125114438 + Casc4 protein_coding retained_intron MGP_LPJ_T0057120.1 MGP_LPJ_G0026336.1 mouse_genomes_project 2 125079359 125120384 + Casc4 protein_coding retained_intron MGP_LPJ_T0057121.1 MGP_LPJ_G0026336.1 mouse_genomes_project 2 125079359 125150589 + MGP_LPJ_P0057121 Casc4 protein_coding protein_coding MGP_LPJ_T0057122.1 MGP_LPJ_G0026336.1 mouse_genomes_project 2 125079359 125150559 + MGP_LPJ_P0057122 Casc4 protein_coding protein_coding MGP_LPJ_T0057123.1 MGP_LPJ_G0026336.1 mouse_genomes_project 2 125079934 125148191 + Casc4 protein_coding processed_transcript MGP_LPJ_T0057124.1 MGP_LPJ_G0026336.1 mouse_genomes_project 2 125113034 125148156 + MGP_LPJ_P0057124 Casc4 protein_coding protein_coding MGP_LPJ_T0054354.1 MGP_LPJ_G0025617.1 mouse_genomes_project 2 35675241 35676210 - MGP_LPJ_P0054354 Olfr361 protein_coding protein_coding MGP_LPJ_T0007248.1 MGP_LPJ_G0005946.1 mouse_genomes_project 2 74926649 74928734 - Haglr lincRNA lincRNA MGP_LPJ_T0007249.1 MGP_LPJ_G0005946.1 mouse_genomes_project 2 74928660 74941232 - Haglr lincRNA lincRNA MGP_LPJ_T0013414.1 MGP_LPJ_G0011505.1 mouse_genomes_project 2 16316462 16317243 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004068.1 MGP_LPJ_G0003611.1 mouse_genomes_project 2 108017083 108018183 + Gm13954 antisense antisense MGP_LPJ_T0007209.1 MGP_LPJ_G0005913.1 mouse_genomes_project 2 48932391 48939362 - Gm13480 lincRNA lincRNA MGP_LPJ_T0054929.1 MGP_LPJ_G0025720.1 mouse_genomes_project 2 67172530 67253662 + MGP_LPJ_P0054929 Xirp2 protein_coding protein_coding MGP_LPJ_T0054930.1 MGP_LPJ_G0025720.1 mouse_genomes_project 2 67172530 67253670 + MGP_LPJ_P0054930 Xirp2 protein_coding protein_coding MGP_LPJ_T0053160.1 MGP_LPJ_G0025412.1 mouse_genomes_project 2 24141242 24147037 - MGP_LPJ_P0053160 C030048H21Rik protein_coding protein_coding MGP_LPJ_T0056036.1 MGP_LPJ_G0026097.1 mouse_genomes_project 2 93507403 93508843 + MGP_LPJ_P0056036 Chrm4 protein_coding protein_coding MGP_LPJ_T0055576.1 MGP_LPJ_G0025867.1 mouse_genomes_project 2 86335305 86364574 - MGP_LPJ_P0055576 protein_coding unknown_likely_coding MGP_LPJ_T0055578.1 MGP_LPJ_G0025867.1 mouse_genomes_project 2 86336280 86354353 - MGP_LPJ_P0055578 protein_coding protein_coding MGP_LPJ_T0004150.1 MGP_LPJ_G0003672.1 mouse_genomes_project 2 160521453 160531355 - Acss2os antisense antisense MGP_LPJ_T0054349.1 MGP_LPJ_G0025613.1 mouse_genomes_project 2 35525865 35526813 + MGP_LPJ_P0054349 Olfr356 protein_coding protein_coding MGP_LPJ_T0055052.1 MGP_LPJ_G0025746.1 mouse_genomes_project 2 70568899 70569760 - MGP_LPJ_P0055052 Gm26558 protein_coding protein_coding MGP_LPJ_T0100570.1 MGP_LPJ_G0038833.1 mouse_genomes_project 2 24828331 24828402 + Gm24134 snoRNA snoRNA MGP_LPJ_T0055522.1 MGP_LPJ_G0025845.1 mouse_genomes_project 2 85366797 85382694 - MGP_LPJ_P0055522 Rtn4rl2 protein_coding protein_coding MGP_LPJ_T0055523.1 MGP_LPJ_G0025845.1 mouse_genomes_project 2 85366819 85382676 - MGP_LPJ_P0055523 Rtn4rl2 protein_coding protein_coding MGP_LPJ_T0055524.1 MGP_LPJ_G0025845.1 mouse_genomes_project 2 85375389 85382460 - Rtn4rl2 protein_coding processed_transcript MGP_LPJ_T0017828.1 MGP_LPJ_G0015392.1 mouse_genomes_project 2 155195136 155199158 + Gm14123 processed_transcript processed_transcript MGP_LPJ_T0003964.1 MGP_LPJ_G0003541.1 mouse_genomes_project 2 31252081 31254328 - Gm13523 antisense antisense MGP_LPJ_T0055756.1 MGP_LPJ_G0026024.1 mouse_genomes_project 2 90468720 90469656 - MGP_LPJ_P0055756 Olfr1223 protein_coding protein_coding MGP_LPJ_T0001120.1 MGP_LPJ_G0001045.1 mouse_genomes_project 2 86303773 86306101 + TEC TEC MGP_LPJ_T0013806.1 MGP_LPJ_G0011897.1 mouse_genomes_project 2 163572646 163572957 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100625.1 MGP_LPJ_G0038888.1 mouse_genomes_project 2 154070420 154070512 - Gm24551 snoRNA snoRNA MGP_LPJ_T0055689.1 MGP_LPJ_G0025963.1 mouse_genomes_project 2 88865881 88866817 + MGP_LPJ_P0055689 Olfr1140 protein_coding protein_coding MGP_LPJ_T0013809.1 MGP_LPJ_G0011900.1 mouse_genomes_project 2 165114828 165115694 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102076.1 MGP_LPJ_G0040113.1 mouse_genomes_project 2 180027660 180085138 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0054343.1 MGP_LPJ_G0025607.1 mouse_genomes_project 2 35434898 35435837 + MGP_LPJ_P0054343 Olfr350 protein_coding protein_coding MGP_LPJ_T0056235.1 MGP_LPJ_G0026132.1 mouse_genomes_project 2 103936847 103947547 + Commd9 protein_coding processed_transcript MGP_LPJ_T0056236.1 MGP_LPJ_G0026132.1 mouse_genomes_project 2 103936853 103952253 + MGP_LPJ_P0056236 Commd9 protein_coding protein_coding MGP_LPJ_T0056237.1 MGP_LPJ_G0026132.1 mouse_genomes_project 2 103936860 103947813 + Commd9 protein_coding retained_intron MGP_LPJ_T0056238.1 MGP_LPJ_G0026132.1 mouse_genomes_project 2 103936863 103946006 + Commd9 protein_coding retained_intron MGP_LPJ_T0059724.1 MGP_LPJ_G0026957.1 mouse_genomes_project 2 188114318 188116093 + MGP_LPJ_P0059724 Abhd16b protein_coding protein_coding MGP_LPJ_T0056170.1 MGP_LPJ_G0026119.1 mouse_genomes_project 2 95567382 95581165 - MGP_LPJ_P0056170 Accsl protein_coding protein_coding MGP_LPJ_T0056171.1 MGP_LPJ_G0026119.1 mouse_genomes_project 2 95567383 95569043 - MGP_LPJ_P0056171 Accsl protein_coding protein_coding MGP_LPJ_T0056172.1 MGP_LPJ_G0026119.1 mouse_genomes_project 2 95567388 95568755 - Accsl protein_coding processed_transcript MGP_LPJ_T0056173.1 MGP_LPJ_G0026119.1 mouse_genomes_project 2 95573066 95576818 - Accsl protein_coding processed_transcript MGP_LPJ_T0056174.1 MGP_LPJ_G0026119.1 mouse_genomes_project 2 95573780 95581165 - Accsl protein_coding processed_transcript MGP_LPJ_T0056175.1 MGP_LPJ_G0026119.1 mouse_genomes_project 2 95577876 95581080 - MGP_LPJ_P0056175 Accsl protein_coding protein_coding MGP_LPJ_T0056176.1 MGP_LPJ_G0026119.1 mouse_genomes_project 2 95577876 95581090 - MGP_LPJ_P0056176 Accsl protein_coding protein_coding MGP_LPJ_T0056177.1 MGP_LPJ_G0026119.1 mouse_genomes_project 2 95578028 95580701 - Accsl protein_coding processed_transcript MGP_LPJ_T0102064.1 MGP_LPJ_G0040101.1 mouse_genomes_project 2 122343526 122343767 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0055189.1 MGP_LPJ_G0025771.1 mouse_genomes_project 2 73720676 73739281 - MGP_LPJ_P0055189 Chrna1 protein_coding protein_coding MGP_LPJ_T0058206.1 MGP_LPJ_G0026616.1 mouse_genomes_project 2 157647177 157670898 + MGP_LPJ_P0058206 Mylk2 protein_coding protein_coding MGP_LPJ_T0054374.1 MGP_LPJ_G0025626.1 mouse_genomes_project 2 36018275 36029238 - MGP_LPJ_P0054374 Zbtb26 protein_coding protein_coding MGP_LPJ_T0054375.1 MGP_LPJ_G0025626.1 mouse_genomes_project 2 36021125 36029237 - MGP_LPJ_P0054375 Zbtb26 protein_coding protein_coding MGP_LPJ_T0054376.1 MGP_LPJ_G0025626.1 mouse_genomes_project 2 36024585 36029252 - Zbtb26 protein_coding processed_transcript MGP_LPJ_T0013398.1 MGP_LPJ_G0011489.1 mouse_genomes_project 2 12579969 12581053 + processed_pseudogene processed_pseudogene MGP_LPJ_T0057335.1 MGP_LPJ_G0026390.1 mouse_genomes_project 2 130718390 130733340 + Snrnp200 protein_coding retained_intron MGP_LPJ_T0057336.1 MGP_LPJ_G0026390.1 mouse_genomes_project 2 130718403 130750965 + MGP_LPJ_P0057336 Snrnp200 protein_coding protein_coding MGP_LPJ_T0057337.1 MGP_LPJ_G0026390.1 mouse_genomes_project 2 130732317 130735779 + Snrnp200 protein_coding processed_transcript MGP_LPJ_T0057338.1 MGP_LPJ_G0026390.1 mouse_genomes_project 2 130747430 130748815 + Snrnp200 protein_coding retained_intron MGP_LPJ_T0057339.1 MGP_LPJ_G0026390.1 mouse_genomes_project 2 130748580 130750474 + Snrnp200 protein_coding retained_intron MGP_LPJ_T0003956.1 MGP_LPJ_G0003533.1 mouse_genomes_project 2 29432225 29434103 - Gm13405 antisense antisense MGP_LPJ_T0004025.1 MGP_LPJ_G0003586.1 mouse_genomes_project 2 73757373 73777930 + Chn1os3 antisense antisense MGP_LPJ_T0004026.1 MGP_LPJ_G0003586.1 mouse_genomes_project 2 73757671 73760048 + Chn1os3 antisense antisense MGP_LPJ_T0053583.1 MGP_LPJ_G0025482.1 mouse_genomes_project 2 28170901 28188142 + MGP_LPJ_P0053583 Set protein_coding protein_coding MGP_LPJ_T0053584.1 MGP_LPJ_G0025482.1 mouse_genomes_project 2 28176293 28187396 + MGP_LPJ_P0053584 Set protein_coding protein_coding MGP_LPJ_T0053585.1 MGP_LPJ_G0025482.1 mouse_genomes_project 2 28184294 28188572 + MGP_LPJ_P0053585 Set protein_coding protein_coding MGP_LPJ_T0053586.1 MGP_LPJ_G0025482.1 mouse_genomes_project 2 28185031 28187469 + Set protein_coding processed_transcript MGP_LPJ_T0056436.1 MGP_LPJ_G0026172.1 mouse_genomes_project 2 108313739 108353384 - Dnajc24 protein_coding processed_transcript MGP_LPJ_T0056437.1 MGP_LPJ_G0026172.1 mouse_genomes_project 2 108313919 108353340 - MGP_LPJ_P0056437 Dnajc24 protein_coding protein_coding MGP_LPJ_T0056438.1 MGP_LPJ_G0026172.1 mouse_genomes_project 2 108313967 108353323 - Dnajc24 protein_coding processed_transcript MGP_LPJ_T0056439.1 MGP_LPJ_G0026172.1 mouse_genomes_project 2 108317442 108352138 - Dnajc24 protein_coding processed_transcript MGP_LPJ_T0010390.1 MGP_LPJ_G0008508.1 mouse_genomes_project 2 7789424 7789522 + Mir297a-4 miRNA miRNA MGP_LPJ_T0059070.1 MGP_LPJ_G0026816.1 mouse_genomes_project 2 170447146 170450886 + Pcif1 protein_coding retained_intron MGP_LPJ_T0059071.1 MGP_LPJ_G0026816.1 mouse_genomes_project 2 170447207 170462148 + MGP_LPJ_P0059071 Pcif1 protein_coding protein_coding MGP_LPJ_T0059072.1 MGP_LPJ_G0026816.1 mouse_genomes_project 2 170447894 170450797 + Pcif1 protein_coding retained_intron MGP_LPJ_T0059073.1 MGP_LPJ_G0026816.1 mouse_genomes_project 2 170451619 170452381 + Pcif1 protein_coding retained_intron MGP_LPJ_T0099321.1 MGP_LPJ_G0037584.1 mouse_genomes_project 2 25478098 25478224 - Gm25541 snRNA snRNA MGP_LPJ_T0017830.1 MGP_LPJ_G0015394.1 mouse_genomes_project 2 157042365 157072389 + Gm14164 processed_transcript processed_transcript MGP_LPJ_T0017831.1 MGP_LPJ_G0015394.1 mouse_genomes_project 2 157071812 157072214 + Gm14164 processed_transcript processed_transcript MGP_LPJ_T0052844.1 MGP_LPJ_G0025349.1 mouse_genomes_project 2 22855466 22863989 + MGP_LPJ_P0052844 Nsmf protein_coding protein_coding MGP_LPJ_T0052845.1 MGP_LPJ_G0025349.1 mouse_genomes_project 2 22855484 22861670 + MGP_LPJ_P0052845 Nsmf protein_coding protein_coding MGP_LPJ_T0052846.1 MGP_LPJ_G0025349.1 mouse_genomes_project 2 22855490 22863988 + MGP_LPJ_P0052846 Nsmf protein_coding protein_coding MGP_LPJ_T0052847.1 MGP_LPJ_G0025349.1 mouse_genomes_project 2 22855495 22863989 + MGP_LPJ_P0052847 Nsmf protein_coding protein_coding MGP_LPJ_T0052848.1 MGP_LPJ_G0025349.1 mouse_genomes_project 2 22855514 22857987 + Nsmf protein_coding retained_intron MGP_LPJ_T0052849.1 MGP_LPJ_G0025349.1 mouse_genomes_project 2 22855518 22856208 + Nsmf protein_coding retained_intron MGP_LPJ_T0052850.1 MGP_LPJ_G0025349.1 mouse_genomes_project 2 22855524 22863989 + MGP_LPJ_P0052850 Nsmf protein_coding protein_coding MGP_LPJ_T0052851.1 MGP_LPJ_G0025349.1 mouse_genomes_project 2 22855524 22863989 + MGP_LPJ_P0052851 Nsmf protein_coding protein_coding MGP_LPJ_T0052852.1 MGP_LPJ_G0025349.1 mouse_genomes_project 2 22855536 22860164 + MGP_LPJ_P0052852 Nsmf protein_coding protein_coding MGP_LPJ_T0052853.1 MGP_LPJ_G0025349.1 mouse_genomes_project 2 22855546 22863989 + MGP_LPJ_P0052853 Nsmf protein_coding protein_coding MGP_LPJ_T0052854.1 MGP_LPJ_G0025349.1 mouse_genomes_project 2 22855567 22863989 + MGP_LPJ_P0052854 Nsmf protein_coding protein_coding MGP_LPJ_T0052855.1 MGP_LPJ_G0025349.1 mouse_genomes_project 2 22855579 22863989 + MGP_LPJ_P0052855 Nsmf protein_coding protein_coding MGP_LPJ_T0052856.1 MGP_LPJ_G0025349.1 mouse_genomes_project 2 22855579 22863736 + MGP_LPJ_P0052856 Nsmf protein_coding nonsense_mediated_decay MGP_LPJ_T0052857.1 MGP_LPJ_G0025349.1 mouse_genomes_project 2 22856991 22858455 + Nsmf protein_coding retained_intron MGP_LPJ_T0052858.1 MGP_LPJ_G0025349.1 mouse_genomes_project 2 22858254 22863989 + MGP_LPJ_P0052858 Nsmf protein_coding protein_coding MGP_LPJ_T0052859.1 MGP_LPJ_G0025349.1 mouse_genomes_project 2 22858683 22860767 + Nsmf protein_coding retained_intron MGP_LPJ_T0052860.1 MGP_LPJ_G0025349.1 mouse_genomes_project 2 22861243 22862215 + Nsmf protein_coding retained_intron MGP_LPJ_T0052861.1 MGP_LPJ_G0025349.1 mouse_genomes_project 2 22861936 22862817 + Nsmf protein_coding retained_intron MGP_LPJ_T0058229.1 MGP_LPJ_G0026621.1 mouse_genomes_project 2 157788789 157812697 + MGP_LPJ_P0058229 Xkr7 protein_coding protein_coding MGP_LPJ_T0013663.1 MGP_LPJ_G0011754.1 mouse_genomes_project 2 106807046 106807233 - processed_pseudogene processed_pseudogene MGP_LPJ_T0058949.1 MGP_LPJ_G0026773.1 mouse_genomes_project 2 169669145 169677464 - MGP_LPJ_P0058949 Wfdc5 protein_coding protein_coding MGP_LPJ_T0058950.1 MGP_LPJ_G0026773.1 mouse_genomes_project 2 169670311 169677320 - MGP_LPJ_P0058950 Wfdc5 protein_coding protein_coding MGP_LPJ_T0102051.1 MGP_LPJ_G0040088.1 mouse_genomes_project 2 89531107 89533388 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0004143.1 MGP_LPJ_G0003665.1 mouse_genomes_project 2 156624553 156627904 - Gm14154 antisense antisense MGP_LPJ_T0056221.1 MGP_LPJ_G0026130.1 mouse_genomes_project 2 103713069 103720848 + Traf6 protein_coding processed_transcript MGP_LPJ_T0056222.1 MGP_LPJ_G0026130.1 mouse_genomes_project 2 103713080 103736312 + MGP_LPJ_P0056222 Traf6 protein_coding protein_coding MGP_LPJ_T0056223.1 MGP_LPJ_G0026130.1 mouse_genomes_project 2 103713207 103735022 + MGP_LPJ_P0056223 Traf6 protein_coding unknown_likely_coding MGP_LPJ_T0056224.1 MGP_LPJ_G0026130.1 mouse_genomes_project 2 103718827 103724704 + Traf6 protein_coding processed_transcript MGP_LPJ_T0007224.1 MGP_LPJ_G0005926.1 mouse_genomes_project 2 61955158 61959397 - Gm13565 lincRNA lincRNA MGP_LPJ_T0058012.1 MGP_LPJ_G0026555.1 mouse_genomes_project 2 153324283 153327875 + MGP_LPJ_P0058012 Cst9 protein_coding protein_coding MGP_LPJ_T0003951.1 MGP_LPJ_G0003529.1 mouse_genomes_project 2 27958648 27960247 - 2600006K01Rik antisense antisense MGP_LPJ_T0011525.1 MGP_LPJ_G0009643.1 mouse_genomes_project 2 119903183 119903496 + Gm24914 misc_RNA misc_RNA MGP_LPJ_T0057297.1 MGP_LPJ_G0026383.1 mouse_genomes_project 2 130280145 130366565 - MGP_LPJ_P0057297 Trpm7 protein_coding protein_coding MGP_LPJ_T0057298.1 MGP_LPJ_G0026383.1 mouse_genomes_project 2 130280151 130366452 - MGP_LPJ_P0057298 Trpm7 protein_coding protein_coding MGP_LPJ_T0057299.1 MGP_LPJ_G0026383.1 mouse_genomes_project 2 130280164 130284117 - Trpm7 protein_coding retained_intron MGP_LPJ_T0057300.1 MGP_LPJ_G0026383.1 mouse_genomes_project 2 130281407 130291206 - Trpm7 protein_coding retained_intron MGP_LPJ_T0057301.1 MGP_LPJ_G0026383.1 mouse_genomes_project 2 130281478 130286427 - MGP_LPJ_P0057301 Trpm7 protein_coding protein_coding MGP_LPJ_T0057302.1 MGP_LPJ_G0026383.1 mouse_genomes_project 2 130285574 130286410 - Trpm7 protein_coding retained_intron MGP_LPJ_T0057303.1 MGP_LPJ_G0026383.1 mouse_genomes_project 2 130285863 130293642 - Trpm7 protein_coding processed_transcript MGP_LPJ_T0057304.1 MGP_LPJ_G0026383.1 mouse_genomes_project 2 130302777 130307232 - Trpm7 protein_coding retained_intron MGP_LPJ_T0057305.1 MGP_LPJ_G0026383.1 mouse_genomes_project 2 130318789 130323370 - Trpm7 protein_coding retained_intron MGP_LPJ_T0057306.1 MGP_LPJ_G0026383.1 mouse_genomes_project 2 130320362 130366521 - Trpm7 protein_coding retained_intron MGP_LPJ_T0057307.1 MGP_LPJ_G0026383.1 mouse_genomes_project 2 130320365 130323709 - Trpm7 protein_coding retained_intron MGP_LPJ_T0013499.1 MGP_LPJ_G0011590.1 mouse_genomes_project 2 50721478 50722574 + processed_pseudogene processed_pseudogene MGP_LPJ_T0059015.1 MGP_LPJ_G0026803.1 mouse_genomes_project 2 170268590 170271290 + MGP_LPJ_P0059015 Spint5 protein_coding protein_coding MGP_LPJ_T0059016.1 MGP_LPJ_G0026803.1 mouse_genomes_project 2 170268590 170271290 + MGP_LPJ_P0059016 Spint5 protein_coding protein_coding MGP_LPJ_T0102071.1 MGP_LPJ_G0040108.1 mouse_genomes_project 2 153420694 153424667 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0102028.1 MGP_LPJ_G0040065.1 mouse_genomes_project 2 86216389 86216843 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0007146.1 MGP_LPJ_G0005866.1 mouse_genomes_project 2 6358818 6366545 + 1700061F12Rik lincRNA lincRNA MGP_LPJ_T0059308.1 MGP_LPJ_G0026861.1 mouse_genomes_project 2 174336173 174454963 - MGP_LPJ_P0059308 Nfatc2 protein_coding protein_coding MGP_LPJ_T0059309.1 MGP_LPJ_G0026861.1 mouse_genomes_project 2 174336173 174454858 - MGP_LPJ_P0059309 Nfatc2 protein_coding protein_coding MGP_LPJ_T0059310.1 MGP_LPJ_G0026861.1 mouse_genomes_project 2 174336176 174415531 - Nfatc2 protein_coding processed_transcript MGP_LPJ_T0059311.1 MGP_LPJ_G0026861.1 mouse_genomes_project 2 174378600 174467031 - Nfatc2 protein_coding processed_transcript MGP_LPJ_T0059312.1 MGP_LPJ_G0026861.1 mouse_genomes_project 2 174379504 174467056 - MGP_LPJ_P0059312 Nfatc2 protein_coding protein_coding MGP_LPJ_T0059313.1 MGP_LPJ_G0026861.1 mouse_genomes_project 2 174379790 174454789 - MGP_LPJ_P0059313 Nfatc2 protein_coding protein_coding MGP_LPJ_T0059314.1 MGP_LPJ_G0026861.1 mouse_genomes_project 2 174393865 174454929 - Nfatc2 protein_coding retained_intron MGP_LPJ_T0059315.1 MGP_LPJ_G0026861.1 mouse_genomes_project 2 174429709 174454963 - Nfatc2 protein_coding retained_intron MGP_LPJ_T0011534.1 MGP_LPJ_G0009652.1 mouse_genomes_project 2 161908197 161908441 + Gm27651 misc_RNA misc_RNA MGP_LPJ_T0055171.1 MGP_LPJ_G0025768.1 mouse_genomes_project 2 73458646 73487051 + MGP_LPJ_P0055171 Scrn3 protein_coding protein_coding MGP_LPJ_T0055172.1 MGP_LPJ_G0025768.1 mouse_genomes_project 2 73458699 73468054 + MGP_LPJ_P0055172 Scrn3 protein_coding protein_coding MGP_LPJ_T0055173.1 MGP_LPJ_G0025768.1 mouse_genomes_project 2 73458704 73461834 + Scrn3 protein_coding processed_transcript MGP_LPJ_T0055174.1 MGP_LPJ_G0025768.1 mouse_genomes_project 2 73458704 73479035 + Scrn3 protein_coding processed_transcript MGP_LPJ_T0055175.1 MGP_LPJ_G0025768.1 mouse_genomes_project 2 73458721 73469280 + Scrn3 protein_coding processed_transcript MGP_LPJ_T0055176.1 MGP_LPJ_G0025768.1 mouse_genomes_project 2 73466657 73485532 + Scrn3 protein_coding processed_transcript MGP_LPJ_T0052409.1 MGP_LPJ_G0025276.1 mouse_genomes_project 2 8976215 9026473 + MGP_LPJ_P0052409 Il2ra protein_coding protein_coding MGP_LPJ_T0052410.1 MGP_LPJ_G0025276.1 mouse_genomes_project 2 8976257 8982163 + MGP_LPJ_P0052410 Il2ra protein_coding protein_coding MGP_LPJ_T0052412.1 MGP_LPJ_G0025276.1 mouse_genomes_project 2 9012292 9012794 + Il2ra protein_coding retained_intron MGP_LPJ_T0057524.1 MGP_LPJ_G0026441.1 mouse_genomes_project 2 134117520 134118984 + MGP_LPJ_P0057524 Tmem239 protein_coding protein_coding MGP_LPJ_T0058636.1 MGP_LPJ_G0026702.1 mouse_genomes_project 2 161570253 161592754 + MGP_LPJ_P0058636 Aar2 protein_coding protein_coding MGP_LPJ_T0058637.1 MGP_LPJ_G0026702.1 mouse_genomes_project 2 161570265 161593571 + MGP_LPJ_P0058637 Aar2 protein_coding protein_coding MGP_LPJ_T0058638.1 MGP_LPJ_G0026702.1 mouse_genomes_project 2 161570277 161573363 + Aar2 protein_coding processed_transcript MGP_LPJ_T0058639.1 MGP_LPJ_G0026702.1 mouse_genomes_project 2 161570279 161573744 + MGP_LPJ_P0058639 Aar2 protein_coding protein_coding MGP_LPJ_T0058640.1 MGP_LPJ_G0026702.1 mouse_genomes_project 2 161570293 161573497 + MGP_LPJ_P0058640 Aar2 protein_coding protein_coding MGP_LPJ_T0013686.1 MGP_LPJ_G0011777.1 mouse_genomes_project 2 114395509 114396251 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102054.1 MGP_LPJ_G0040091.1 mouse_genomes_project 2 90681921 90687716 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0057550.1 MGP_LPJ_G0026449.1 mouse_genomes_project 2 134324747 134340714 - MGP_LPJ_P0057550 Fastkd5 protein_coding protein_coding MGP_LPJ_T0057551.1 MGP_LPJ_G0026449.1 mouse_genomes_project 2 134325152 134327576 - MGP_LPJ_P0057551 Fastkd5 protein_coding protein_coding MGP_LPJ_T0004009.1 MGP_LPJ_G0003576.1 mouse_genomes_project 2 70380282 70459790 - Gad1os antisense antisense MGP_LPJ_T0004010.1 MGP_LPJ_G0003576.1 mouse_genomes_project 2 70380589 70381813 - Gad1os antisense antisense MGP_LPJ_T0100586.1 MGP_LPJ_G0038849.1 mouse_genomes_project 2 53364989 53365122 + Gm22298 snoRNA snoRNA MGP_LPJ_T0057222.1 MGP_LPJ_G0026364.1 mouse_genomes_project 2 128558218 128639605 + MGP_LPJ_P0057222 Slc12a1 protein_coding protein_coding MGP_LPJ_T0057223.1 MGP_LPJ_G0026364.1 mouse_genomes_project 2 128558293 128574556 + Slc12a1 protein_coding retained_intron MGP_LPJ_T0057224.1 MGP_LPJ_G0026364.1 mouse_genomes_project 2 128558313 128639605 + MGP_LPJ_P0057224 Slc12a1 protein_coding protein_coding MGP_LPJ_T0057225.1 MGP_LPJ_G0026364.1 mouse_genomes_project 2 128558313 128639602 + MGP_LPJ_P0057225 Slc12a1 protein_coding protein_coding MGP_LPJ_T0056581.1 MGP_LPJ_G0026236.1 mouse_genomes_project 2 116787668 116791687 - MGP_LPJ_P0056581 Gjd2 protein_coding protein_coding MGP_LPJ_T0059013.1 MGP_LPJ_G0026801.1 mouse_genomes_project 2 170237278 170240446 + MGP_LPJ_P0059013 Wfdc13 protein_coding protein_coding MGP_LPJ_T0013700.1 MGP_LPJ_G0011791.1 mouse_genomes_project 2 124190645 124191412 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004062.1 MGP_LPJ_G0003609.1 mouse_genomes_project 2 107334315 107347626 - Wt1os antisense antisense MGP_LPJ_T0004063.1 MGP_LPJ_G0003609.1 mouse_genomes_project 2 107334638 107387315 - Wt1os antisense antisense MGP_LPJ_T0004064.1 MGP_LPJ_G0003609.1 mouse_genomes_project 2 107335688 107335889 - Wt1os antisense antisense MGP_LPJ_T0004065.1 MGP_LPJ_G0003609.1 mouse_genomes_project 2 107351477 107387208 - Wt1os antisense antisense MGP_LPJ_T0013705.1 MGP_LPJ_G0011796.1 mouse_genomes_project 2 124919838 124920517 + processed_pseudogene processed_pseudogene MGP_LPJ_T0053968.1 MGP_LPJ_G0025536.1 mouse_genomes_project 2 30712615 30715705 - Lcn2 protein_coding processed_transcript MGP_LPJ_T0053969.1 MGP_LPJ_G0025536.1 mouse_genomes_project 2 30712615 30715780 - MGP_LPJ_P0053969 Lcn2 protein_coding protein_coding MGP_LPJ_T0053970.1 MGP_LPJ_G0025536.1 mouse_genomes_project 2 30712621 30713982 - Lcn2 protein_coding retained_intron MGP_LPJ_T0053971.1 MGP_LPJ_G0025536.1 mouse_genomes_project 2 30713165 30714090 - Lcn2 protein_coding retained_intron MGP_LPJ_T0053972.1 MGP_LPJ_G0025536.1 mouse_genomes_project 2 30713427 30716235 - MGP_LPJ_P0053972 Lcn2 protein_coding protein_coding MGP_LPJ_T0053973.1 MGP_LPJ_G0025536.1 mouse_genomes_project 2 30714538 30715742 - Lcn2 protein_coding retained_intron MGP_LPJ_T0102065.1 MGP_LPJ_G0040102.1 mouse_genomes_project 2 124662479 124713496 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0007397.1 MGP_LPJ_G0006067.1 mouse_genomes_project 2 168572109 168593300 + Gm11454 lincRNA lincRNA MGP_LPJ_T0013758.1 MGP_LPJ_G0011849.1 mouse_genomes_project 2 149818071 149818535 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055161.1 MGP_LPJ_G0025765.1 mouse_genomes_project 2 73229319 73358041 - MGP_LPJ_P0055161 Ola1 protein_coding protein_coding MGP_LPJ_T0055162.1 MGP_LPJ_G0025765.1 mouse_genomes_project 2 73229718 73358020 - Ola1 protein_coding processed_transcript MGP_LPJ_T0055163.1 MGP_LPJ_G0025765.1 mouse_genomes_project 2 73229720 73356554 - MGP_LPJ_P0055163 Ola1 protein_coding protein_coding MGP_LPJ_T0055164.1 MGP_LPJ_G0025765.1 mouse_genomes_project 2 73277594 73357927 - MGP_LPJ_P0055164 Ola1 protein_coding protein_coding MGP_LPJ_T0055165.1 MGP_LPJ_G0025765.1 mouse_genomes_project 2 73342306 73358006 - Ola1 protein_coding processed_transcript MGP_LPJ_T0055166.1 MGP_LPJ_G0025765.1 mouse_genomes_project 2 73356464 73362518 - Ola1 protein_coding processed_transcript MGP_LPJ_T0010467.1 MGP_LPJ_G0008585.1 mouse_genomes_project 2 118499105 118499194 + Mir1951 miRNA miRNA MGP_LPJ_T0057615.1 MGP_LPJ_G0026459.1 mouse_genomes_project 2 134868655 134887629 + MGP_LPJ_P0057615 Hspa12b protein_coding protein_coding MGP_LPJ_T0057616.1 MGP_LPJ_G0026459.1 mouse_genomes_project 2 134868817 134878701 + MGP_LPJ_P0057616 Hspa12b protein_coding protein_coding MGP_LPJ_T0057617.1 MGP_LPJ_G0026459.1 mouse_genomes_project 2 134868869 134886535 + MGP_LPJ_P0057617 Hspa12b protein_coding nonsense_mediated_decay MGP_LPJ_T0007410.1 MGP_LPJ_G0006079.1 mouse_genomes_project 2 172823613 172826644 - lincRNA lincRNA MGP_LPJ_T0007411.1 MGP_LPJ_G0006079.1 mouse_genomes_project 2 172824504 172825990 - lincRNA lincRNA MGP_LPJ_T0010464.1 MGP_LPJ_G0008582.1 mouse_genomes_project 2 108340246 108340371 + Gm22002 miRNA miRNA MGP_LPJ_T0052753.1 MGP_LPJ_G0025337.1 mouse_genomes_project 2 22002791 22006686 + MGP_LPJ_P0052753 Il1f5 protein_coding protein_coding MGP_LPJ_T0052754.1 MGP_LPJ_G0025337.1 mouse_genomes_project 2 22003048 22004856 + Il1f5 protein_coding retained_intron MGP_LPJ_T0052755.1 MGP_LPJ_G0025337.1 mouse_genomes_project 2 22003059 22007407 + Il1f5 protein_coding processed_transcript MGP_LPJ_T0052756.1 MGP_LPJ_G0025337.1 mouse_genomes_project 2 22003276 22007150 + MGP_LPJ_P0052756 Il1f5 protein_coding protein_coding MGP_LPJ_T0054411.1 MGP_LPJ_G0025632.1 mouse_genomes_project 2 36969795 36983964 + Lhx2 protein_coding retained_intron MGP_LPJ_T0054412.1 MGP_LPJ_G0025632.1 mouse_genomes_project 2 36971403 36985096 + MGP_LPJ_P0054412 Lhx2 protein_coding protein_coding MGP_LPJ_T0054413.1 MGP_LPJ_G0025632.1 mouse_genomes_project 2 36982038 36984902 + MGP_LPJ_P0054413 Lhx2 protein_coding nonsense_mediated_decay MGP_LPJ_T0054414.1 MGP_LPJ_G0025632.1 mouse_genomes_project 2 36982044 37001060 + MGP_LPJ_P0054414 Lhx2 protein_coding protein_coding MGP_LPJ_T0054415.1 MGP_LPJ_G0025632.1 mouse_genomes_project 2 36982802 36984844 + MGP_LPJ_P0054415 Lhx2 protein_coding protein_coding MGP_LPJ_T0054416.1 MGP_LPJ_G0025632.1 mouse_genomes_project 2 36984072 36990363 + Lhx2 protein_coding retained_intron MGP_LPJ_T0007235.1 MGP_LPJ_G0005937.1 mouse_genomes_project 2 72798993 72829839 + 8430437L04Rik lincRNA lincRNA MGP_LPJ_T0059797.1 MGP_LPJ_G0026968.1 mouse_genomes_project 2 188357086 188363056 + MGP_LPJ_P0059797 Oprl1 protein_coding protein_coding MGP_LPJ_T0059798.1 MGP_LPJ_G0026968.1 mouse_genomes_project 2 188357112 188363046 + MGP_LPJ_P0059798 Oprl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0059799.1 MGP_LPJ_G0026968.1 mouse_genomes_project 2 188357116 188360661 + MGP_LPJ_P0059799 Oprl1 protein_coding protein_coding MGP_LPJ_T0059800.1 MGP_LPJ_G0026968.1 mouse_genomes_project 2 188357137 188363045 + MGP_LPJ_P0059800 Oprl1 protein_coding protein_coding MGP_LPJ_T0059801.1 MGP_LPJ_G0026968.1 mouse_genomes_project 2 188357153 188363043 + MGP_LPJ_P0059801 Oprl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0059802.1 MGP_LPJ_G0026968.1 mouse_genomes_project 2 188357164 188363045 + Oprl1 protein_coding processed_transcript MGP_LPJ_T0059803.1 MGP_LPJ_G0026968.1 mouse_genomes_project 2 188357171 188358449 + Oprl1 protein_coding processed_transcript MGP_LPJ_T0059804.1 MGP_LPJ_G0026968.1 mouse_genomes_project 2 188357418 188363043 + MGP_LPJ_P0059804 Oprl1 protein_coding protein_coding MGP_LPJ_T0059805.1 MGP_LPJ_G0026968.1 mouse_genomes_project 2 188357663 188361422 + MGP_LPJ_P0059805 Oprl1 protein_coding protein_coding MGP_LPJ_T0059806.1 MGP_LPJ_G0026968.1 mouse_genomes_project 2 188357772 188361443 + MGP_LPJ_P0059806 Oprl1 protein_coding protein_coding MGP_LPJ_T0059807.1 MGP_LPJ_G0026968.1 mouse_genomes_project 2 188357773 188361443 + MGP_LPJ_P0059807 Oprl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0058616.1 MGP_LPJ_G0026699.1 mouse_genomes_project 2 161315710 161316568 - MGP_LPJ_P0058616 Scand1 protein_coding protein_coding MGP_LPJ_T0055742.1 MGP_LPJ_G0026013.1 mouse_genomes_project 2 90234407 90235343 - MGP_LPJ_P0055742 Olfr1211 protein_coding protein_coding MGP_LPJ_T0052680.1 MGP_LPJ_G0025319.1 mouse_genomes_project 2 18854247 18863545 + MGP_LPJ_P0052680 Thnsl1 protein_coding protein_coding MGP_LPJ_T0052681.1 MGP_LPJ_G0025319.1 mouse_genomes_project 2 18854262 18862912 + MGP_LPJ_P0052681 Thnsl1 protein_coding protein_coding MGP_LPJ_T0052682.1 MGP_LPJ_G0025319.1 mouse_genomes_project 2 18854282 18861815 + MGP_LPJ_P0052682 Thnsl1 protein_coding protein_coding MGP_LPJ_T0052683.1 MGP_LPJ_G0025319.1 mouse_genomes_project 2 18854296 18860078 + MGP_LPJ_P0052683 Thnsl1 protein_coding protein_coding MGP_LPJ_T0052684.1 MGP_LPJ_G0025319.1 mouse_genomes_project 2 18854310 18862844 + MGP_LPJ_P0052684 Thnsl1 protein_coding protein_coding MGP_LPJ_T0010428.1 MGP_LPJ_G0008546.1 mouse_genomes_project 2 36292311 36292395 - Mir5128 miRNA miRNA MGP_LPJ_T0056103.1 MGP_LPJ_G0026106.1 mouse_genomes_project 2 94010402 94019449 - MGP_LPJ_P0056103 Mapk8ip1 protein_coding protein_coding MGP_LPJ_T0056104.1 MGP_LPJ_G0026106.1 mouse_genomes_project 2 94010406 94028137 - MGP_LPJ_P0056104 Mapk8ip1 protein_coding protein_coding MGP_LPJ_T0056105.1 MGP_LPJ_G0026106.1 mouse_genomes_project 2 94016619 94019450 - Mapk8ip1 protein_coding processed_transcript MGP_LPJ_T0055715.1 MGP_LPJ_G0025987.1 mouse_genomes_project 2 89615947 89616919 + MGP_LPJ_P0055715 Olfr1178 protein_coding protein_coding MGP_LPJ_T0057942.1 MGP_LPJ_G0026533.1 mouse_genomes_project 2 150277935 150295319 - MGP_LPJ_P0057942 Crnkl1 protein_coding protein_coding MGP_LPJ_T0057943.1 MGP_LPJ_G0026533.1 mouse_genomes_project 2 150290693 150291693 - Crnkl1 protein_coding retained_intron MGP_LPJ_T0057944.1 MGP_LPJ_G0026533.1 mouse_genomes_project 2 150292273 150295019 - Crnkl1 protein_coding retained_intron MGP_LPJ_T0057464.1 MGP_LPJ_G0026425.1 mouse_genomes_project 2 132926244 132936425 - MGP_LPJ_P0057464 Il1a protein_coding protein_coding MGP_LPJ_T0013707.1 MGP_LPJ_G0011798.1 mouse_genomes_project 2 125702837 125703430 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013673.1 MGP_LPJ_G0011764.1 mouse_genomes_project 2 110925459 110926087 - processed_pseudogene processed_pseudogene MGP_LPJ_T0053966.1 MGP_LPJ_G0025535.1 mouse_genomes_project 2 30704022 30709728 - MGP_LPJ_P0053966 1110008P14Rik protein_coding protein_coding MGP_LPJ_T0053967.1 MGP_LPJ_G0025535.1 mouse_genomes_project 2 30706966 30709804 - MGP_LPJ_P0053967 1110008P14Rik protein_coding protein_coding MGP_LPJ_T0059476.1 MGP_LPJ_G0026907.1 mouse_genomes_project 2 184490010 184719398 + MGP_LPJ_P0059476 Phactr3 protein_coding protein_coding MGP_LPJ_T0059477.1 MGP_LPJ_G0026907.1 mouse_genomes_project 2 184490214 184717397 + MGP_LPJ_P0059477 Phactr3 protein_coding protein_coding MGP_LPJ_T0059478.1 MGP_LPJ_G0026907.1 mouse_genomes_project 2 184515247 184716427 + MGP_LPJ_P0059478 Phactr3 protein_coding protein_coding MGP_LPJ_T0059479.1 MGP_LPJ_G0026907.1 mouse_genomes_project 2 184549362 184717397 + MGP_LPJ_P0059479 Phactr3 protein_coding protein_coding MGP_LPJ_T0059480.1 MGP_LPJ_G0026907.1 mouse_genomes_project 2 184708461 184712672 + Phactr3 protein_coding retained_intron MGP_LPJ_T0059481.1 MGP_LPJ_G0026907.1 mouse_genomes_project 2 184708697 184713736 + Phactr3 protein_coding retained_intron MGP_LPJ_T0054351.1 MGP_LPJ_G0025615.1 mouse_genomes_project 2 35591200 35592193 - MGP_LPJ_P0054351 Olfr358 protein_coding protein_coding MGP_LPJ_T0053990.1 MGP_LPJ_G0025540.1 mouse_genomes_project 2 30877171 30919963 + Fam102a protein_coding retained_intron MGP_LPJ_T0053991.1 MGP_LPJ_G0025540.1 mouse_genomes_project 2 30877172 30878030 + MGP_LPJ_P0053991 Fam102a protein_coding protein_coding MGP_LPJ_T0053992.1 MGP_LPJ_G0025540.1 mouse_genomes_project 2 30877198 30919969 + MGP_LPJ_P0053992 Fam102a protein_coding protein_coding MGP_LPJ_T0053993.1 MGP_LPJ_G0025540.1 mouse_genomes_project 2 30877572 30900218 + MGP_LPJ_P0053993 Fam102a protein_coding protein_coding MGP_LPJ_T0053994.1 MGP_LPJ_G0025540.1 mouse_genomes_project 2 30882077 30902256 + Fam102a protein_coding processed_transcript MGP_LPJ_T0055615.1 MGP_LPJ_G0025899.1 mouse_genomes_project 2 87018508 87019468 - MGP_LPJ_P0055615 Olfr1047 protein_coding protein_coding MGP_LPJ_T0013681.1 MGP_LPJ_G0011772.1 mouse_genomes_project 2 113740689 113745459 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013593.1 MGP_LPJ_G0011684.1 mouse_genomes_project 2 83000918 83001447 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010349.1 MGP_LPJ_G0008467.1 mouse_genomes_project 2 6402435 6402512 - Gm23963 miRNA miRNA MGP_LPJ_T0054356.1 MGP_LPJ_G0025619.1 mouse_genomes_project 2 35725357 35733415 + MGP_LPJ_P0054356 protein_coding protein_coding MGP_LPJ_T0011511.1 MGP_LPJ_G0009629.1 mouse_genomes_project 2 43981342 43981403 + Gm27676 misc_RNA misc_RNA MGP_LPJ_T0056988.1 MGP_LPJ_G0026318.1 mouse_genomes_project 2 124281887 124286575 + Adal protein_coding retained_intron MGP_LPJ_T0056989.1 MGP_LPJ_G0026318.1 mouse_genomes_project 2 124281898 124299931 + MGP_LPJ_P0056989 Adal protein_coding protein_coding MGP_LPJ_T0056990.1 MGP_LPJ_G0026318.1 mouse_genomes_project 2 124281903 124286573 + Adal protein_coding retained_intron MGP_LPJ_T0056991.1 MGP_LPJ_G0026318.1 mouse_genomes_project 2 124281912 124293549 + Adal protein_coding processed_transcript MGP_LPJ_T0056992.1 MGP_LPJ_G0026318.1 mouse_genomes_project 2 124281958 124298842 + MGP_LPJ_P0056992 Adal protein_coding protein_coding MGP_LPJ_T0056993.1 MGP_LPJ_G0026318.1 mouse_genomes_project 2 124281980 124293737 + Adal protein_coding retained_intron MGP_LPJ_T0056994.1 MGP_LPJ_G0026318.1 mouse_genomes_project 2 124283327 124299937 + MGP_LPJ_P0056994 Adal protein_coding protein_coding MGP_LPJ_T0056995.1 MGP_LPJ_G0026318.1 mouse_genomes_project 2 124293312 124299592 + Adal protein_coding retained_intron MGP_LPJ_T0010350.1 MGP_LPJ_G0008468.1 mouse_genomes_project 2 7723824 7723945 + Gm22072 miRNA miRNA MGP_LPJ_T0007240.1 MGP_LPJ_G0005939.1 mouse_genomes_project 2 73611523 73629404 + Gm13708 lincRNA lincRNA MGP_LPJ_T0099330.1 MGP_LPJ_G0037593.1 mouse_genomes_project 2 52570716 52570822 - Gm25898 snRNA snRNA MGP_LPJ_T0058808.1 MGP_LPJ_G0026738.1 mouse_genomes_project 2 165647114 165650479 - MGP_LPJ_P0058808 Mafb protein_coding protein_coding MGP_LPJ_T0099325.1 MGP_LPJ_G0037588.1 mouse_genomes_project 2 33456330 33456434 + Gm24905 snRNA snRNA MGP_LPJ_T0102043.1 MGP_LPJ_G0040080.1 mouse_genomes_project 2 88929452 88929765 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013448.1 MGP_LPJ_G0011539.1 mouse_genomes_project 2 31726658 31729103 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102044.1 MGP_LPJ_G0040081.1 mouse_genomes_project 2 88946364 88947286 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0058363.1 MGP_LPJ_G0026660.1 mouse_genomes_project 2 159535445 159584961 + Chmp4b protein_coding processed_transcript MGP_LPJ_T0058364.1 MGP_LPJ_G0026660.1 mouse_genomes_project 2 159540557 159584966 + MGP_LPJ_P0058364 Chmp4b protein_coding protein_coding MGP_LPJ_T0055399.1 MGP_LPJ_G0025814.1 mouse_genomes_project 2 80728743 80731628 + MGP_LPJ_P0055399 Prdx6b protein_coding protein_coding MGP_LPJ_T0010357.1 MGP_LPJ_G0008475.1 mouse_genomes_project 2 7726606 7726710 + Gm23578 miRNA miRNA MGP_LPJ_T0102048.1 MGP_LPJ_G0040085.1 mouse_genomes_project 2 89122578 89123470 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013783.1 MGP_LPJ_G0011874.1 mouse_genomes_project 2 157324538 157324755 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003974.1 MGP_LPJ_G0003548.1 mouse_genomes_project 2 34411708 34415904 + 9030204H09Rik antisense antisense MGP_LPJ_T0057396.1 MGP_LPJ_G0026406.1 mouse_genomes_project 2 131334167 131335269 - MGP_LPJ_P0057396 1500011K16Rik protein_coding protein_coding MGP_LPJ_T0013553.1 MGP_LPJ_G0011644.1 mouse_genomes_project 2 70526531 70526780 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013544.1 MGP_LPJ_G0011635.1 mouse_genomes_project 2 66216097 66217264 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055605.1 MGP_LPJ_G0025889.1 mouse_genomes_project 2 86826703 86827614 + MGP_LPJ_P0055605 Olfr1033 protein_coding protein_coding MGP_LPJ_T0010366.1 MGP_LPJ_G0008484.1 mouse_genomes_project 2 7733216 7733313 + Mir467c miRNA miRNA MGP_LPJ_T0007354.1 MGP_LPJ_G0006032.1 mouse_genomes_project 2 141630961 141807818 + Gm14064 lincRNA lincRNA MGP_LPJ_T0102030.1 MGP_LPJ_G0040067.1 mouse_genomes_project 2 86712062 86713404 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0057810.1 MGP_LPJ_G0026501.1 mouse_genomes_project 2 143529927 143671788 + MGP_LPJ_P0057810 Sptlc3 protein_coding protein_coding MGP_LPJ_T0057811.1 MGP_LPJ_G0026501.1 mouse_genomes_project 2 143529934 143672406 + MGP_LPJ_P0057811 Sptlc3 protein_coding protein_coding MGP_LPJ_T0017821.1 MGP_LPJ_G0015388.1 mouse_genomes_project 2 135049034 135051681 + processed_transcript processed_transcript MGP_LPJ_T0013411.1 MGP_LPJ_G0011502.1 mouse_genomes_project 2 16102882 16102955 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007315.1 MGP_LPJ_G0006001.1 mouse_genomes_project 2 118940078 118959740 + G630016G05Rik lincRNA lincRNA MGP_LPJ_T0007316.1 MGP_LPJ_G0006001.1 mouse_genomes_project 2 118940735 118959739 + G630016G05Rik lincRNA lincRNA MGP_LPJ_T0055754.1 MGP_LPJ_G0026023.1 mouse_genomes_project 2 90442349 90443285 - MGP_LPJ_P0055754 Olfr1222 protein_coding protein_coding MGP_LPJ_T0055755.1 MGP_LPJ_G0026023.1 mouse_genomes_project 2 90442634 90443287 - MGP_LPJ_P0055755 Olfr1222 protein_coding protein_coding MGP_LPJ_T0100627.1 MGP_LPJ_G0038890.1 mouse_genomes_project 2 155652700 155652829 + Gm22187 snoRNA snoRNA MGP_LPJ_T0057430.1 MGP_LPJ_G0026414.1 mouse_genomes_project 2 132404049 132443375 + MGP_LPJ_P0057430 Tmem87b protein_coding protein_coding MGP_LPJ_T0057431.1 MGP_LPJ_G0026414.1 mouse_genomes_project 2 132404270 132443378 + MGP_LPJ_P0057431 Tmem87b protein_coding unknown_likely_coding MGP_LPJ_T0057432.1 MGP_LPJ_G0026414.1 mouse_genomes_project 2 132404315 132440906 + MGP_LPJ_P0057432 Tmem87b protein_coding protein_coding MGP_LPJ_T0057433.1 MGP_LPJ_G0026414.1 mouse_genomes_project 2 132419240 132439430 + Tmem87b protein_coding processed_transcript MGP_LPJ_T0057434.1 MGP_LPJ_G0026414.1 mouse_genomes_project 2 132428771 132438839 + Tmem87b protein_coding retained_intron MGP_LPJ_T0057435.1 MGP_LPJ_G0026414.1 mouse_genomes_project 2 132439073 132440525 + Tmem87b protein_coding processed_transcript MGP_LPJ_T0001119.1 MGP_LPJ_G0001044.1 mouse_genomes_project 2 79353534 79476705 + TEC TEC MGP_LPJ_T0055382.1 MGP_LPJ_G0025810.1 mouse_genomes_project 2 79850945 79855175 - MGP_LPJ_P0055382 Neurod1 protein_coding protein_coding MGP_LPJ_T0056246.1 MGP_LPJ_G0026136.1 mouse_genomes_project 2 104627201 104715886 + MGP_LPJ_P0056246 Pamr1 protein_coding protein_coding MGP_LPJ_T0056247.1 MGP_LPJ_G0026136.1 mouse_genomes_project 2 104627338 104708541 + Pamr1 protein_coding retained_intron MGP_LPJ_T0056248.1 MGP_LPJ_G0026136.1 mouse_genomes_project 2 104708917 104713625 + Pamr1 protein_coding retained_intron MGP_LPJ_T0052827.1 MGP_LPJ_G0025347.1 mouse_genomes_project 2 22763221 22764202 - MGP_LPJ_P0052827 protein_coding protein_coding MGP_LPJ_T0052828.1 MGP_LPJ_G0025347.1 mouse_genomes_project 2 22763598 22764093 - MGP_LPJ_P0052828 protein_coding protein_coding MGP_LPJ_T0013577.1 MGP_LPJ_G0011668.1 mouse_genomes_project 2 78855656 78856295 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013698.1 MGP_LPJ_G0011789.1 mouse_genomes_project 2 122757235 122758690 + processed_pseudogene processed_pseudogene MGP_LPJ_T0054959.1 MGP_LPJ_G0025727.1 mouse_genomes_project 2 68988801 69003233 - MGP_LPJ_P0054959 Spc25 protein_coding protein_coding MGP_LPJ_T0054960.1 MGP_LPJ_G0025727.1 mouse_genomes_project 2 68989327 69002240 - MGP_LPJ_P0054960 Spc25 protein_coding protein_coding MGP_LPJ_T0054961.1 MGP_LPJ_G0025727.1 mouse_genomes_project 2 68992053 69002206 - MGP_LPJ_P0054961 Spc25 protein_coding protein_coding MGP_LPJ_T0054962.1 MGP_LPJ_G0025727.1 mouse_genomes_project 2 68992096 69003256 - MGP_LPJ_P0054962 Spc25 protein_coding protein_coding MGP_LPJ_T0054963.1 MGP_LPJ_G0025727.1 mouse_genomes_project 2 68993540 69003199 - Spc25 protein_coding processed_transcript MGP_LPJ_T0054964.1 MGP_LPJ_G0025727.1 mouse_genomes_project 2 68994816 69002291 - Spc25 protein_coding processed_transcript MGP_LPJ_T0054965.1 MGP_LPJ_G0025727.1 mouse_genomes_project 2 69002713 69003255 - Spc25 protein_coding processed_transcript MGP_LPJ_T0007360.1 MGP_LPJ_G0006037.1 mouse_genomes_project 2 151220722 151232128 - Gm14114 lincRNA lincRNA MGP_LPJ_T0057138.1 MGP_LPJ_G0026341.1 mouse_genomes_project 2 125279891 125348871 - MGP_LPJ_P0057138 Spg11 protein_coding protein_coding MGP_LPJ_T0057139.1 MGP_LPJ_G0026341.1 mouse_genomes_project 2 125318476 125348781 - Spg11 protein_coding processed_transcript MGP_LPJ_T0057140.1 MGP_LPJ_G0026341.1 mouse_genomes_project 2 125334267 125348860 - Spg11 protein_coding processed_transcript MGP_LPJ_T0013445.1 MGP_LPJ_G0011536.1 mouse_genomes_project 2 30270485 30271891 + processed_pseudogene processed_pseudogene MGP_LPJ_T0058566.1 MGP_LPJ_G0026694.1 mouse_genomes_project 2 161089952 161111967 - MGP_LPJ_P0058566 Rbm12 protein_coding protein_coding MGP_LPJ_T0058567.1 MGP_LPJ_G0026694.1 mouse_genomes_project 2 161089952 161111967 - MGP_LPJ_P0058567 Rbm12 protein_coding protein_coding MGP_LPJ_T0058568.1 MGP_LPJ_G0026694.1 mouse_genomes_project 2 161095509 161111927 - MGP_LPJ_P0058568 Rbm12 protein_coding protein_coding MGP_LPJ_T0058569.1 MGP_LPJ_G0026694.1 mouse_genomes_project 2 161095945 161111989 - MGP_LPJ_P0058569 Rbm12 protein_coding protein_coding MGP_LPJ_T0058570.1 MGP_LPJ_G0026694.1 mouse_genomes_project 2 161095974 161111972 - MGP_LPJ_P0058570 Rbm12 protein_coding protein_coding MGP_LPJ_T0056377.1 MGP_LPJ_G0026160.1 mouse_genomes_project 2 106953178 106976771 - MGP_LPJ_P0056377 Depdc7 protein_coding protein_coding MGP_LPJ_T0056378.1 MGP_LPJ_G0026160.1 mouse_genomes_project 2 106953975 106954550 - Depdc7 protein_coding retained_intron MGP_LPJ_T0100648.1 MGP_LPJ_G0038911.1 mouse_genomes_project 2 174780418 174780547 - Gm25214 snoRNA snoRNA MGP_LPJ_T0055483.1 MGP_LPJ_G0025832.1 mouse_genomes_project 2 85142915 85145279 + protein_coding processed_transcript MGP_LPJ_T0057151.1 MGP_LPJ_G0026349.1 mouse_genomes_project 2 125549160 125553818 - MGP_LPJ_P0057151 Duoxa1 protein_coding protein_coding MGP_LPJ_T0057152.1 MGP_LPJ_G0026349.1 mouse_genomes_project 2 125550519 125560556 - MGP_LPJ_P0057152 Duoxa1 protein_coding protein_coding MGP_LPJ_T0057153.1 MGP_LPJ_G0026349.1 mouse_genomes_project 2 125550522 125552681 - Duoxa1 protein_coding processed_transcript MGP_LPJ_T0057154.1 MGP_LPJ_G0026349.1 mouse_genomes_project 2 125550714 125553796 - MGP_LPJ_P0057154 Duoxa1 protein_coding protein_coding MGP_LPJ_T0057155.1 MGP_LPJ_G0026349.1 mouse_genomes_project 2 125551738 125560593 - MGP_LPJ_P0057155 Duoxa1 protein_coding protein_coding MGP_LPJ_T0057156.1 MGP_LPJ_G0026349.1 mouse_genomes_project 2 125552184 125560507 - MGP_LPJ_P0057156 Duoxa1 protein_coding protein_coding MGP_LPJ_T0057157.1 MGP_LPJ_G0026349.1 mouse_genomes_project 2 125552563 125560514 - MGP_LPJ_P0057157 Duoxa1 protein_coding protein_coding MGP_LPJ_T0055735.1 MGP_LPJ_G0026006.1 mouse_genomes_project 2 90088206 90090590 + MGP_LPJ_P0055735 Olfr1201 protein_coding protein_coding MGP_LPJ_T0058272.1 MGP_LPJ_G0026633.1 mouse_genomes_project 2 158454052 158497310 + MGP_LPJ_P0058272 Dnmt3b protein_coding protein_coding MGP_LPJ_T0058273.1 MGP_LPJ_G0026633.1 mouse_genomes_project 2 158454052 158497310 + MGP_LPJ_P0058273 Dnmt3b protein_coding protein_coding MGP_LPJ_T0058274.1 MGP_LPJ_G0026633.1 mouse_genomes_project 2 158454055 158497310 + MGP_LPJ_P0058274 Dnmt3b protein_coding protein_coding MGP_LPJ_T0058275.1 MGP_LPJ_G0026633.1 mouse_genomes_project 2 158454055 158497310 + MGP_LPJ_P0058275 Dnmt3b protein_coding protein_coding MGP_LPJ_T0058276.1 MGP_LPJ_G0026633.1 mouse_genomes_project 2 158454055 158497310 + MGP_LPJ_P0058276 Dnmt3b protein_coding protein_coding MGP_LPJ_T0058277.1 MGP_LPJ_G0026633.1 mouse_genomes_project 2 158454056 158497310 + MGP_LPJ_P0058277 Dnmt3b protein_coding protein_coding MGP_LPJ_T0058278.1 MGP_LPJ_G0026633.1 mouse_genomes_project 2 158454056 158497310 + MGP_LPJ_P0058278 Dnmt3b protein_coding protein_coding MGP_LPJ_T0058279.1 MGP_LPJ_G0026633.1 mouse_genomes_project 2 158454056 158497310 + MGP_LPJ_P0058279 Dnmt3b protein_coding protein_coding MGP_LPJ_T0058280.1 MGP_LPJ_G0026633.1 mouse_genomes_project 2 158454056 158497306 + MGP_LPJ_P0058280 Dnmt3b protein_coding protein_coding MGP_LPJ_T0058281.1 MGP_LPJ_G0026633.1 mouse_genomes_project 2 158454219 158496896 + MGP_LPJ_P0058281 Dnmt3b protein_coding protein_coding MGP_LPJ_T0058282.1 MGP_LPJ_G0026633.1 mouse_genomes_project 2 158468493 158495979 + MGP_LPJ_P0058282 Dnmt3b protein_coding unknown_likely_coding MGP_LPJ_T0058283.1 MGP_LPJ_G0026633.1 mouse_genomes_project 2 158474022 158476180 + Dnmt3b protein_coding retained_intron MGP_LPJ_T0058284.1 MGP_LPJ_G0026633.1 mouse_genomes_project 2 158477590 158478637 + Dnmt3b protein_coding retained_intron MGP_LPJ_T0056239.1 MGP_LPJ_G0026133.1 mouse_genomes_project 2 104003902 104247580 - MGP_LPJ_P0056239 Ldlrad3 protein_coding protein_coding MGP_LPJ_T0056240.1 MGP_LPJ_G0026133.1 mouse_genomes_project 2 104003902 104247553 - MGP_LPJ_P0056240 Ldlrad3 protein_coding protein_coding MGP_LPJ_T0056241.1 MGP_LPJ_G0026133.1 mouse_genomes_project 2 104170790 104197765 - Ldlrad3 protein_coding processed_transcript MGP_LPJ_T0013456.1 MGP_LPJ_G0011547.1 mouse_genomes_project 2 35345798 35346371 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007310.1 MGP_LPJ_G0005998.1 mouse_genomes_project 2 118196151 118198735 + Gm13976 lincRNA lincRNA MGP_LPJ_T0100646.1 MGP_LPJ_G0038909.1 mouse_genomes_project 2 172788460 172788550 + Snord12 snoRNA snoRNA MGP_LPJ_T0057745.1 MGP_LPJ_G0026487.1 mouse_genomes_project 2 136758237 136804571 - Fermt1 protein_coding retained_intron MGP_LPJ_T0057746.1 MGP_LPJ_G0026487.1 mouse_genomes_project 2 136758237 136804848 - MGP_LPJ_P0057746 Fermt1 protein_coding protein_coding MGP_LPJ_T0057747.1 MGP_LPJ_G0026487.1 mouse_genomes_project 2 136795033 136801027 - Fermt1 protein_coding processed_transcript MGP_LPJ_T0057748.1 MGP_LPJ_G0026487.1 mouse_genomes_project 2 136798016 136800893 - Fermt1 protein_coding processed_transcript MGP_LPJ_T0010494.1 MGP_LPJ_G0008612.1 mouse_genomes_project 2 163934115 163934241 + Gm26141 miRNA miRNA MGP_LPJ_T0013574.1 MGP_LPJ_G0011665.1 mouse_genomes_project 2 77600131 77606434 + processed_pseudogene processed_pseudogene MGP_LPJ_T0053403.1 MGP_LPJ_G0025455.1 mouse_genomes_project 2 26519183 26519605 + MGP_LPJ_P0053403 protein_coding protein_coding MGP_LPJ_T0100578.1 MGP_LPJ_G0038841.1 mouse_genomes_project 2 35983917 35984028 - Snord90 snoRNA snoRNA MGP_LPJ_T0013567.1 MGP_LPJ_G0011658.1 mouse_genomes_project 2 74810362 74810821 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007140.1 MGP_LPJ_G0005861.1 mouse_genomes_project 2 3355686 3357759 - Gm13383 lincRNA lincRNA MGP_LPJ_T0054904.1 MGP_LPJ_G0025713.1 mouse_genomes_project 2 65745600 65791931 - MGP_LPJ_P0054904 Galnt3 protein_coding protein_coding MGP_LPJ_T0054905.1 MGP_LPJ_G0025713.1 mouse_genomes_project 2 65746920 65760283 - Galnt3 protein_coding processed_transcript MGP_LPJ_T0054906.1 MGP_LPJ_G0025713.1 mouse_genomes_project 2 65756220 65759130 - Galnt3 protein_coding processed_transcript MGP_LPJ_T0054907.1 MGP_LPJ_G0025713.1 mouse_genomes_project 2 65760699 65767528 - Galnt3 protein_coding processed_transcript MGP_LPJ_T0013622.1 MGP_LPJ_G0011713.1 mouse_genomes_project 2 89837203 89846677 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007350.1 MGP_LPJ_G0006028.1 mouse_genomes_project 2 139599959 139606641 - Gm14211 lincRNA lincRNA MGP_LPJ_T0055740.1 MGP_LPJ_G0026011.1 mouse_genomes_project 2 90194741 90195668 - MGP_LPJ_P0055740 Olfr1208 protein_coding protein_coding MGP_LPJ_T0052774.1 MGP_LPJ_G0025341.1 mouse_genomes_project 2 22169127 22224234 - MGP_LPJ_P0052774 Pax8 protein_coding protein_coding MGP_LPJ_T0052775.1 MGP_LPJ_G0025341.1 mouse_genomes_project 2 22169961 22171650 - Pax8 protein_coding retained_intron MGP_LPJ_T0052776.1 MGP_LPJ_G0025341.1 mouse_genomes_project 2 22170087 22223732 - MGP_LPJ_P0052776 Pax8 protein_coding protein_coding MGP_LPJ_T0052777.1 MGP_LPJ_G0025341.1 mouse_genomes_project 2 22170098 22224199 - MGP_LPJ_P0052777 Pax8 protein_coding protein_coding MGP_LPJ_T0052778.1 MGP_LPJ_G0025341.1 mouse_genomes_project 2 22178080 22224209 - MGP_LPJ_P0052778 Pax8 protein_coding protein_coding MGP_LPJ_T0052779.1 MGP_LPJ_G0025341.1 mouse_genomes_project 2 22189993 22223850 - MGP_LPJ_P0052779 Pax8 protein_coding protein_coding MGP_LPJ_T0052780.1 MGP_LPJ_G0025341.1 mouse_genomes_project 2 22191814 22194717 - Pax8 protein_coding processed_transcript MGP_LPJ_T0052781.1 MGP_LPJ_G0025341.1 mouse_genomes_project 2 22220522 22224209 - Pax8 protein_coding retained_intron MGP_LPJ_T0010456.1 MGP_LPJ_G0008574.1 mouse_genomes_project 2 95910287 95910391 - Gm23630 miRNA miRNA MGP_LPJ_T0057993.1 MGP_LPJ_G0026546.1 mouse_genomes_project 2 153153492 153156919 + MGP_LPJ_P0057993 Nxt1 protein_coding protein_coding MGP_LPJ_T0057994.1 MGP_LPJ_G0026546.1 mouse_genomes_project 2 153153517 153156919 + MGP_LPJ_P0057994 Nxt1 protein_coding protein_coding MGP_LPJ_T0007450.1 MGP_LPJ_G0006113.1 mouse_genomes_project 2 187401535 187416018 + Gm14344 lincRNA lincRNA MGP_LPJ_T0054639.1 MGP_LPJ_G0025668.1 mouse_genomes_project 2 52124678 52422713 + MGP_LPJ_P0054639 Fmnl2 protein_coding protein_coding MGP_LPJ_T0054640.1 MGP_LPJ_G0025668.1 mouse_genomes_project 2 52124686 52423111 + MGP_LPJ_P0054640 Fmnl2 protein_coding protein_coding MGP_LPJ_T0054641.1 MGP_LPJ_G0025668.1 mouse_genomes_project 2 52124686 52420787 + MGP_LPJ_P0054641 Fmnl2 protein_coding protein_coding MGP_LPJ_T0054642.1 MGP_LPJ_G0025668.1 mouse_genomes_project 2 52124961 52422720 + MGP_LPJ_P0054642 Fmnl2 protein_coding unknown_likely_coding MGP_LPJ_T0054643.1 MGP_LPJ_G0025668.1 mouse_genomes_project 2 52402057 52422713 + MGP_LPJ_P0054643 Fmnl2 protein_coding protein_coding MGP_LPJ_T0054644.1 MGP_LPJ_G0025668.1 mouse_genomes_project 2 52407731 52422713 + MGP_LPJ_P0054644 Fmnl2 protein_coding protein_coding MGP_LPJ_T0054645.1 MGP_LPJ_G0025668.1 mouse_genomes_project 2 52414930 52421112 + MGP_LPJ_P0054645 Fmnl2 protein_coding protein_coding MGP_LPJ_T0010361.1 MGP_LPJ_G0008479.1 mouse_genomes_project 2 7730181 7730267 + Mir669d-2 miRNA miRNA MGP_LPJ_T0054701.1 MGP_LPJ_G0025684.1 mouse_genomes_project 2 58281212 58331226 + MGP_LPJ_P0054701 Gm11099 protein_coding protein_coding MGP_LPJ_T0100626.1 MGP_LPJ_G0038889.1 mouse_genomes_project 2 155473163 155473307 + Gm23598 snoRNA snoRNA MGP_LPJ_T0056592.1 MGP_LPJ_G0026239.1 mouse_genomes_project 2 116972110 116980118 - MGP_LPJ_P0056592 Zfp770 protein_coding protein_coding MGP_LPJ_T0056593.1 MGP_LPJ_G0026239.1 mouse_genomes_project 2 116977209 116980089 - Zfp770 protein_coding processed_transcript MGP_LPJ_T0017701.1 MGP_LPJ_G0015323.1 mouse_genomes_project 2 25994768 26000228 - Gm13372 processed_transcript processed_transcript MGP_LPJ_T0013429.1 MGP_LPJ_G0011520.1 mouse_genomes_project 2 21899337 21900821 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013453.1 MGP_LPJ_G0011544.1 mouse_genomes_project 2 34055438 34055960 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013643.1 MGP_LPJ_G0011734.1 mouse_genomes_project 2 100496443 100496768 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007353.1 MGP_LPJ_G0006031.1 mouse_genomes_project 2 141255097 141298834 + Gm14055 lincRNA lincRNA MGP_LPJ_T0055661.1 MGP_LPJ_G0025944.1 mouse_genomes_project 2 88426252 88427197 + MGP_LPJ_P0055661 Olfr1121 protein_coding protein_coding MGP_LPJ_T0059363.1 MGP_LPJ_G0026873.1 mouse_genomes_project 2 178104624 178111854 - MGP_LPJ_P0059363 Cbln4 protein_coding protein_coding MGP_LPJ_T0059651.1 MGP_LPJ_G0026944.1 mouse_genomes_project 2 187774283 187775808 + MGP_LPJ_P0059651 Ppdpf protein_coding protein_coding MGP_LPJ_T0059652.1 MGP_LPJ_G0026944.1 mouse_genomes_project 2 187774332 187775778 + Ppdpf protein_coding retained_intron MGP_LPJ_T0059653.1 MGP_LPJ_G0026944.1 mouse_genomes_project 2 187774372 187775541 + MGP_LPJ_P0059653 Ppdpf protein_coding protein_coding MGP_LPJ_T0059654.1 MGP_LPJ_G0026944.1 mouse_genomes_project 2 187774383 187775541 + Ppdpf protein_coding retained_intron MGP_LPJ_T0059655.1 MGP_LPJ_G0026944.1 mouse_genomes_project 2 187774572 187775541 + Ppdpf protein_coding retained_intron MGP_LPJ_T0059656.1 MGP_LPJ_G0026944.1 mouse_genomes_project 2 187774950 187775541 + Ppdpf protein_coding retained_intron MGP_LPJ_T0098528.1 MGP_LPJ_G0036803.1 mouse_genomes_project 2 133146004 133173750 - Gm14040 sense_intronic sense_intronic MGP_LPJ_T0099352.1 MGP_LPJ_G0037615.1 mouse_genomes_project 2 130118850 130118999 - Gm23753 snRNA snRNA MGP_LPJ_T0013648.1 MGP_LPJ_G0011739.1 mouse_genomes_project 2 102397001 102398348 - processed_pseudogene processed_pseudogene MGP_LPJ_T0057148.1 MGP_LPJ_G0026347.1 mouse_genomes_project 2 125526551 125545216 - MGP_LPJ_P0057148 Duox2 protein_coding protein_coding MGP_LPJ_T0057149.1 MGP_LPJ_G0026347.1 mouse_genomes_project 2 125530007 125532889 - Duox2 protein_coding processed_transcript MGP_LPJ_T0003982.1 MGP_LPJ_G0003555.1 mouse_genomes_project 2 42894974 42901057 - Arhgap15os antisense antisense MGP_LPJ_T0058433.1 MGP_LPJ_G0026674.1 mouse_genomes_project 2 160537669 160571370 - MGP_LPJ_P0058433 Gss protein_coding protein_coding MGP_LPJ_T0058434.1 MGP_LPJ_G0026674.1 mouse_genomes_project 2 160537677 160571274 - MGP_LPJ_P0058434 Gss protein_coding protein_coding MGP_LPJ_T0058435.1 MGP_LPJ_G0026674.1 mouse_genomes_project 2 160537977 160548394 - MGP_LPJ_P0058435 Gss protein_coding protein_coding MGP_LPJ_T0058436.1 MGP_LPJ_G0026674.1 mouse_genomes_project 2 160538699 160549779 - Gss protein_coding retained_intron MGP_LPJ_T0058439.1 MGP_LPJ_G0026674.1 mouse_genomes_project 2 160548354 160558145 - MGP_LPJ_P0058439 Gss protein_coding protein_coding MGP_LPJ_T0058440.1 MGP_LPJ_G0026674.1 mouse_genomes_project 2 160552184 160571287 - Gss protein_coding processed_transcript MGP_LPJ_T0058441.1 MGP_LPJ_G0026674.1 mouse_genomes_project 2 160552920 160563087 - Gss protein_coding retained_intron MGP_LPJ_T0058442.1 MGP_LPJ_G0026674.1 mouse_genomes_project 2 160552991 160571127 - MGP_LPJ_P0058442 Gss protein_coding protein_coding MGP_LPJ_T0058443.1 MGP_LPJ_G0026674.1 mouse_genomes_project 2 160553703 160558137 - Gss protein_coding processed_transcript MGP_LPJ_T0058022.1 MGP_LPJ_G0026560.1 mouse_genomes_project 2 154340019 154413264 + MGP_LPJ_P0058022 Syndig1 protein_coding protein_coding MGP_LPJ_T0058024.1 MGP_LPJ_G0026560.1 mouse_genomes_project 2 154341596 154518286 + MGP_LPJ_P0058024 Syndig1 protein_coding protein_coding MGP_LPJ_T0058025.1 MGP_LPJ_G0026560.1 mouse_genomes_project 2 154341677 154413305 + MGP_LPJ_P0058025 Syndig1 protein_coding protein_coding MGP_LPJ_T0058026.1 MGP_LPJ_G0026560.1 mouse_genomes_project 2 154341709 154413301 + MGP_LPJ_P0058026 Syndig1 protein_coding protein_coding MGP_LPJ_T0058027.1 MGP_LPJ_G0026560.1 mouse_genomes_project 2 154341730 154413431 + MGP_LPJ_P0058027 Syndig1 protein_coding protein_coding MGP_LPJ_T0058028.1 MGP_LPJ_G0026560.1 mouse_genomes_project 2 154410006 154518286 + MGP_LPJ_P0058028 Syndig1 protein_coding protein_coding MGP_LPJ_T0010429.1 MGP_LPJ_G0008547.1 mouse_genomes_project 2 36846042 36846124 - Gm44455 miRNA miRNA MGP_LPJ_T0013842.1 MGP_LPJ_G0011933.1 mouse_genomes_project 2 187897238 187897877 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100563.1 MGP_LPJ_G0038826.1 mouse_genomes_project 2 19453485 19453608 - Gm24886 snoRNA snoRNA MGP_LPJ_T0013384.1 MGP_LPJ_G0011475.1 mouse_genomes_project 2 5786481 5787028 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017875.1 MGP_LPJ_G0015414.1 mouse_genomes_project 2 187321869 187332500 - Gm14343 processed_transcript processed_transcript MGP_LPJ_T0003946.1 MGP_LPJ_G0003525.1 mouse_genomes_project 2 25106253 25157284 + Sardhos antisense antisense MGP_LPJ_T0052782.1 MGP_LPJ_G0025342.1 mouse_genomes_project 2 22365271 22532187 - MGP_LPJ_P0052782 Cacna1b protein_coding protein_coding MGP_LPJ_T0052783.1 MGP_LPJ_G0025342.1 mouse_genomes_project 2 22365278 22532164 - MGP_LPJ_P0052783 Cacna1b protein_coding protein_coding MGP_LPJ_T0052784.1 MGP_LPJ_G0025342.1 mouse_genomes_project 2 22367759 22532082 - MGP_LPJ_P0052784 Cacna1b protein_coding protein_coding MGP_LPJ_T0052785.1 MGP_LPJ_G0025342.1 mouse_genomes_project 2 22367763 22368919 - MGP_LPJ_P0052785 Cacna1b protein_coding protein_coding MGP_LPJ_T0052786.1 MGP_LPJ_G0025342.1 mouse_genomes_project 2 22367954 22532082 - MGP_LPJ_P0052786 Cacna1b protein_coding protein_coding MGP_LPJ_T0052787.1 MGP_LPJ_G0025342.1 mouse_genomes_project 2 22367954 22532082 - MGP_LPJ_P0052787 Cacna1b protein_coding protein_coding MGP_LPJ_T0052788.1 MGP_LPJ_G0025342.1 mouse_genomes_project 2 22369375 22379706 - MGP_LPJ_P0052788 Cacna1b protein_coding protein_coding MGP_LPJ_T0052789.1 MGP_LPJ_G0025342.1 mouse_genomes_project 2 22371316 22399911 - MGP_LPJ_P0052789 Cacna1b protein_coding nonsense_mediated_decay MGP_LPJ_T0052790.1 MGP_LPJ_G0025342.1 mouse_genomes_project 2 22383981 22393372 - MGP_LPJ_P0052790 Cacna1b protein_coding protein_coding MGP_LPJ_T0052791.1 MGP_LPJ_G0025342.1 mouse_genomes_project 2 22442984 22449353 - MGP_LPJ_P0052791 Cacna1b protein_coding protein_coding MGP_LPJ_T0058159.1 MGP_LPJ_G0026595.1 mouse_genomes_project 2 157111499 157114565 - MGP_LPJ_P0058159 Zcchc3 protein_coding protein_coding MGP_LPJ_T0056507.1 MGP_LPJ_G0026194.1 mouse_genomes_project 2 113857772 113858779 + MGP_LPJ_P0056507 Olfr1278 protein_coding protein_coding MGP_LPJ_T0007436.1 MGP_LPJ_G0006100.1 mouse_genomes_project 2 177231334 177307675 + Gm14266 lincRNA lincRNA MGP_LPJ_T0007439.1 MGP_LPJ_G0006100.1 mouse_genomes_project 2 177291777 177309819 + Gm14266 lincRNA lincRNA MGP_LPJ_T0056291.1 MGP_LPJ_G0026143.1 mouse_genomes_project 2 105571709 105602987 - MGP_LPJ_P0056291 Cat protein_coding protein_coding MGP_LPJ_T0056292.1 MGP_LPJ_G0026143.1 mouse_genomes_project 2 105572454 105602952 - MGP_LPJ_P0056292 Cat protein_coding protein_coding MGP_LPJ_T0059808.1 MGP_LPJ_G0026969.1 mouse_genomes_project 2 188404685 188476939 + MGP_LPJ_P0059808 Myt1 protein_coding protein_coding MGP_LPJ_T0059809.1 MGP_LPJ_G0026969.1 mouse_genomes_project 2 188404749 188474519 + MGP_LPJ_P0059809 Myt1 protein_coding protein_coding MGP_LPJ_T0059810.1 MGP_LPJ_G0026969.1 mouse_genomes_project 2 188408382 188442612 + Myt1 protein_coding processed_transcript MGP_LPJ_T0059811.1 MGP_LPJ_G0026969.1 mouse_genomes_project 2 188408742 188452902 + MGP_LPJ_P0059811 Myt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0059812.1 MGP_LPJ_G0026969.1 mouse_genomes_project 2 188428021 188463505 + MGP_LPJ_P0059812 Myt1 protein_coding protein_coding MGP_LPJ_T0059813.1 MGP_LPJ_G0026969.1 mouse_genomes_project 2 188443026 188476874 + Myt1 protein_coding retained_intron MGP_LPJ_T0059814.1 MGP_LPJ_G0026969.1 mouse_genomes_project 2 188444317 188454433 + Myt1 protein_coding processed_transcript MGP_LPJ_T0059815.1 MGP_LPJ_G0026969.1 mouse_genomes_project 2 188459090 188467991 + MGP_LPJ_P0059815 Myt1 protein_coding protein_coding MGP_LPJ_T0059816.1 MGP_LPJ_G0026969.1 mouse_genomes_project 2 188467450 188469889 + Myt1 protein_coding retained_intron MGP_LPJ_T0056401.1 MGP_LPJ_G0026167.1 mouse_genomes_project 2 107492848 107660812 + MGP_LPJ_P0056401 Them7 protein_coding protein_coding MGP_LPJ_T0056402.1 MGP_LPJ_G0026167.1 mouse_genomes_project 2 107492870 107660052 + Them7 protein_coding processed_transcript MGP_LPJ_T0007361.1 MGP_LPJ_G0006038.1 mouse_genomes_project 2 151734612 151736127 - Gm14110 lincRNA lincRNA MGP_LPJ_T0057548.1 MGP_LPJ_G0026448.1 mouse_genomes_project 2 134301211 134340725 - MGP_LPJ_P0057548 Ubox5 protein_coding protein_coding MGP_LPJ_T0057549.1 MGP_LPJ_G0026448.1 mouse_genomes_project 2 134310830 134340714 - MGP_LPJ_P0057549 Ubox5 protein_coding nonsense_mediated_decay MGP_LPJ_T0059456.1 MGP_LPJ_G0026900.1 mouse_genomes_project 2 180682211 180695143 + MGP_LPJ_P0059456 Nelfcd protein_coding protein_coding MGP_LPJ_T0059457.1 MGP_LPJ_G0026900.1 mouse_genomes_project 2 180682258 180695143 + MGP_LPJ_P0059457 Nelfcd protein_coding protein_coding MGP_LPJ_T0059458.1 MGP_LPJ_G0026900.1 mouse_genomes_project 2 180682287 180690302 + Nelfcd protein_coding processed_transcript MGP_LPJ_T0059459.1 MGP_LPJ_G0026900.1 mouse_genomes_project 2 180691021 180692553 + Nelfcd protein_coding retained_intron MGP_LPJ_T0059460.1 MGP_LPJ_G0026900.1 mouse_genomes_project 2 180692319 180693589 + Nelfcd protein_coding retained_intron MGP_LPJ_T0059461.1 MGP_LPJ_G0026900.1 mouse_genomes_project 2 180694002 180695038 + Nelfcd protein_coding retained_intron MGP_LPJ_T0003921.1 MGP_LPJ_G0003508.1 mouse_genomes_project 2 17212830 17215783 - Gm13348 antisense antisense MGP_LPJ_T0054896.1 MGP_LPJ_G0025712.1 mouse_genomes_project 2 65496865 65692971 + MGP_LPJ_P0054896 Csrnp3 protein_coding protein_coding MGP_LPJ_T0054897.1 MGP_LPJ_G0025712.1 mouse_genomes_project 2 65496940 65687031 + MGP_LPJ_P0054897 Csrnp3 protein_coding protein_coding MGP_LPJ_T0054898.1 MGP_LPJ_G0025712.1 mouse_genomes_project 2 65496943 65531765 + Csrnp3 protein_coding retained_intron MGP_LPJ_T0054899.1 MGP_LPJ_G0025712.1 mouse_genomes_project 2 65496953 65684704 + MGP_LPJ_P0054899 Csrnp3 protein_coding nonsense_mediated_decay MGP_LPJ_T0054900.1 MGP_LPJ_G0025712.1 mouse_genomes_project 2 65512669 65607443 + Csrnp3 protein_coding retained_intron MGP_LPJ_T0054901.1 MGP_LPJ_G0025712.1 mouse_genomes_project 2 65586529 65685371 + MGP_LPJ_P0054901 Csrnp3 protein_coding protein_coding MGP_LPJ_T0054902.1 MGP_LPJ_G0025712.1 mouse_genomes_project 2 65588784 65684909 + MGP_LPJ_P0054902 Csrnp3 protein_coding protein_coding MGP_LPJ_T0054903.1 MGP_LPJ_G0025712.1 mouse_genomes_project 2 65606952 65684478 + MGP_LPJ_P0054903 Csrnp3 protein_coding protein_coding MGP_LPJ_T0010434.1 MGP_LPJ_G0008552.1 mouse_genomes_project 2 43890346 43890424 - Mir5129 miRNA miRNA MGP_LPJ_T0059305.1 MGP_LPJ_G0026860.1 mouse_genomes_project 2 174099026 174120689 - MGP_LPJ_P0059305 Kcng1 protein_coding protein_coding MGP_LPJ_T0059306.1 MGP_LPJ_G0026860.1 mouse_genomes_project 2 174100607 174109016 - MGP_LPJ_P0059306 Kcng1 protein_coding protein_coding MGP_LPJ_T0059307.1 MGP_LPJ_G0026860.1 mouse_genomes_project 2 174108783 174122713 - MGP_LPJ_P0059307 Kcng1 protein_coding protein_coding MGP_LPJ_T0007196.1 MGP_LPJ_G0005903.1 mouse_genomes_project 2 34830406 34831132 + Gm13431 lincRNA lincRNA MGP_LPJ_T0007197.1 MGP_LPJ_G0005903.1 mouse_genomes_project 2 34830454 34836580 + Gm13431 lincRNA lincRNA MGP_LPJ_T0007198.1 MGP_LPJ_G0005903.1 mouse_genomes_project 2 34834124 34836512 + Gm13431 lincRNA lincRNA MGP_LPJ_T0007283.1 MGP_LPJ_G0005974.1 mouse_genomes_project 2 96494732 96496458 - Gm13793 lincRNA lincRNA MGP_LPJ_T0053974.1 MGP_LPJ_G0025537.1 mouse_genomes_project 2 30726621 30739361 + MGP_LPJ_P0053974 Ptges2 protein_coding protein_coding MGP_LPJ_T0053975.1 MGP_LPJ_G0025537.1 mouse_genomes_project 2 30727165 30734510 + MGP_LPJ_P0053975 Ptges2 protein_coding nonsense_mediated_decay MGP_LPJ_T0053976.1 MGP_LPJ_G0025537.1 mouse_genomes_project 2 30728245 30735063 + Ptges2 protein_coding retained_intron MGP_LPJ_T0055177.1 MGP_LPJ_G0025769.1 mouse_genomes_project 2 73489181 73534848 - MGP_LPJ_P0055177 Gpr155 protein_coding unknown_likely_coding MGP_LPJ_T0055178.1 MGP_LPJ_G0025769.1 mouse_genomes_project 2 73489636 73534917 - MGP_LPJ_P0055178 Gpr155 protein_coding protein_coding MGP_LPJ_T0055179.1 MGP_LPJ_G0025769.1 mouse_genomes_project 2 73495325 73511024 - MGP_LPJ_P0055179 Gpr155 protein_coding protein_coding MGP_LPJ_T0055180.1 MGP_LPJ_G0025769.1 mouse_genomes_project 2 73498570 73534903 - Gpr155 protein_coding processed_transcript MGP_LPJ_T0055181.1 MGP_LPJ_G0025769.1 mouse_genomes_project 2 73498570 73534903 - Gpr155 protein_coding retained_intron MGP_LPJ_T0055182.1 MGP_LPJ_G0025769.1 mouse_genomes_project 2 73510932 73518642 - Gpr155 protein_coding processed_transcript MGP_LPJ_T0055183.1 MGP_LPJ_G0025769.1 mouse_genomes_project 2 73529910 73534916 - Gpr155 protein_coding retained_intron MGP_LPJ_T0053445.1 MGP_LPJ_G0025463.1 mouse_genomes_project 2 26849209 26867615 - MGP_LPJ_P0053445 Gtf3c4 protein_coding protein_coding MGP_LPJ_T0053446.1 MGP_LPJ_G0025463.1 mouse_genomes_project 2 26849215 26867541 - MGP_LPJ_P0053446 Gtf3c4 protein_coding protein_coding MGP_LPJ_T0053447.1 MGP_LPJ_G0025463.1 mouse_genomes_project 2 26862458 26867541 - Gtf3c4 protein_coding processed_transcript MGP_LPJ_T0053448.1 MGP_LPJ_G0025463.1 mouse_genomes_project 2 26862558 26867607 - Gtf3c4 protein_coding processed_transcript MGP_LPJ_T0001095.1 MGP_LPJ_G0001020.1 mouse_genomes_project 2 33994056 33995047 - TEC TEC MGP_LPJ_T0007221.1 MGP_LPJ_G0005923.1 mouse_genomes_project 2 59461077 59462774 + Gm13572 lincRNA lincRNA MGP_LPJ_T0013671.1 MGP_LPJ_G0011762.1 mouse_genomes_project 2 109418722 109419220 + processed_pseudogene processed_pseudogene MGP_LPJ_T0056210.1 MGP_LPJ_G0026127.1 mouse_genomes_project 2 103590298 103659237 - MGP_LPJ_P0056210 B230118H07Rik protein_coding protein_coding MGP_LPJ_T0056211.1 MGP_LPJ_G0026127.1 mouse_genomes_project 2 103590307 103604058 - MGP_LPJ_P0056211 B230118H07Rik protein_coding protein_coding MGP_LPJ_T0056212.1 MGP_LPJ_G0026127.1 mouse_genomes_project 2 103590408 103659278 - MGP_LPJ_P0056212 B230118H07Rik protein_coding protein_coding MGP_LPJ_T0056213.1 MGP_LPJ_G0026127.1 mouse_genomes_project 2 103590412 103614559 - B230118H07Rik protein_coding processed_transcript MGP_LPJ_T0056214.1 MGP_LPJ_G0026127.1 mouse_genomes_project 2 103603967 103658639 - MGP_LPJ_P0056214 B230118H07Rik protein_coding protein_coding MGP_LPJ_T0056215.1 MGP_LPJ_G0026127.1 mouse_genomes_project 2 103639696 103659345 - B230118H07Rik protein_coding retained_intron MGP_LPJ_T0056216.1 MGP_LPJ_G0026127.1 mouse_genomes_project 2 103640222 103651405 - B230118H07Rik protein_coding retained_intron MGP_LPJ_T0056217.1 MGP_LPJ_G0026127.1 mouse_genomes_project 2 103640732 103679891 - B230118H07Rik protein_coding retained_intron MGP_LPJ_T0010397.1 MGP_LPJ_G0008515.1 mouse_genomes_project 2 15602454 15602512 + Mir7655 miRNA miRNA MGP_LPJ_T0057677.1 MGP_LPJ_G0026470.1 mouse_genomes_project 2 135308468 135324924 - MGP_LPJ_P0057677 Adra1d protein_coding protein_coding MGP_LPJ_T0007322.1 MGP_LPJ_G0006005.1 mouse_genomes_project 2 120791559 120793105 - Gm28183 lincRNA lincRNA MGP_LPJ_T0054052.1 MGP_LPJ_G0025551.1 mouse_genomes_project 2 31096776 31099257 - 6330409D20Rik protein_coding processed_transcript MGP_LPJ_T0054053.1 MGP_LPJ_G0025551.1 mouse_genomes_project 2 31096776 31106949 - MGP_LPJ_P0054053 6330409D20Rik protein_coding protein_coding MGP_LPJ_T0057740.1 MGP_LPJ_G0026485.1 mouse_genomes_project 2 136705286 136723849 + MGP_LPJ_P0057740 Crls1 protein_coding protein_coding MGP_LPJ_T0057741.1 MGP_LPJ_G0026485.1 mouse_genomes_project 2 136705298 136726493 + MGP_LPJ_P0057741 Crls1 protein_coding nonsense_mediated_decay MGP_LPJ_T0057742.1 MGP_LPJ_G0026485.1 mouse_genomes_project 2 136705427 136726488 + MGP_LPJ_P0057742 Crls1 protein_coding protein_coding MGP_LPJ_T0057743.1 MGP_LPJ_G0026485.1 mouse_genomes_project 2 136706348 136725601 + MGP_LPJ_P0057743 Crls1 protein_coding protein_coding MGP_LPJ_T0013547.1 MGP_LPJ_G0011638.1 mouse_genomes_project 2 67504393 67504476 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010420.1 MGP_LPJ_G0008538.1 mouse_genomes_project 2 30638226 30638305 + Gm23363 miRNA miRNA MGP_LPJ_T0057232.1 MGP_LPJ_G0026367.1 mouse_genomes_project 2 128923586 128926379 + MGP_LPJ_P0057232 Gm9913 protein_coding protein_coding MGP_LPJ_T0054931.1 MGP_LPJ_G0025721.1 mouse_genomes_project 2 67294788 67552877 + B3galt1 protein_coding processed_transcript MGP_LPJ_T0054932.1 MGP_LPJ_G0025721.1 mouse_genomes_project 2 67486483 67872537 + MGP_LPJ_P0054932 B3galt1 protein_coding protein_coding MGP_LPJ_T0054933.1 MGP_LPJ_G0025721.1 mouse_genomes_project 2 67859083 67874901 + MGP_LPJ_P0054933 B3galt1 protein_coding protein_coding MGP_LPJ_T0054934.1 MGP_LPJ_G0025721.1 mouse_genomes_project 2 67872099 67877076 + MGP_LPJ_P0054934 B3galt1 protein_coding protein_coding MGP_LPJ_T0059327.1 MGP_LPJ_G0026863.1 mouse_genomes_project 2 174629360 174650737 - MGP_LPJ_P0059327 Sall4 protein_coding protein_coding MGP_LPJ_T0059328.1 MGP_LPJ_G0026863.1 mouse_genomes_project 2 174629360 174650737 - MGP_LPJ_P0059328 Sall4 protein_coding protein_coding MGP_LPJ_T0059329.1 MGP_LPJ_G0026863.1 mouse_genomes_project 2 174629360 174650565 - MGP_LPJ_P0059329 Sall4 protein_coding protein_coding MGP_LPJ_T0059330.1 MGP_LPJ_G0026863.1 mouse_genomes_project 2 174635978 174637007 - MGP_LPJ_P0059330 Sall4 protein_coding protein_coding MGP_LPJ_T0059331.1 MGP_LPJ_G0026863.1 mouse_genomes_project 2 174637244 174648782 - MGP_LPJ_P0059331 Sall4 protein_coding protein_coding MGP_LPJ_T0059332.1 MGP_LPJ_G0026863.1 mouse_genomes_project 2 174637677 174651479 - Sall4 protein_coding processed_transcript MGP_LPJ_T0059333.1 MGP_LPJ_G0026863.1 mouse_genomes_project 2 174637816 174650653 - Sall4 protein_coding processed_transcript MGP_LPJ_T0056269.1 MGP_LPJ_G0026139.1 mouse_genomes_project 2 105119731 105174561 - MGP_LPJ_P0056269 Pdhx protein_coding protein_coding MGP_LPJ_T0056270.1 MGP_LPJ_G0026139.1 mouse_genomes_project 2 105131936 105174383 - MGP_LPJ_P0056270 Pdhx protein_coding protein_coding MGP_LPJ_T0056271.1 MGP_LPJ_G0026139.1 mouse_genomes_project 2 105139075 105174510 - MGP_LPJ_P0056271 Pdhx protein_coding protein_coding MGP_LPJ_T0001114.1 MGP_LPJ_G0001039.1 mouse_genomes_project 2 68777493 68781496 + TEC TEC MGP_LPJ_T0001132.1 MGP_LPJ_G0001056.1 mouse_genomes_project 2 153382640 153383005 - TEC TEC MGP_LPJ_T0099366.1 MGP_LPJ_G0037629.1 mouse_genomes_project 2 168230121 168230279 - Gm24478 snRNA snRNA MGP_LPJ_T0055271.1 MGP_LPJ_G0025793.1 mouse_genomes_project 2 76202294 76207759 - MGP_LPJ_P0055271 protein_coding protein_coding MGP_LPJ_T0057135.1 MGP_LPJ_G0026339.1 mouse_genomes_project 2 125250968 125282971 + MGP_LPJ_P0057135 Eif3j1 protein_coding protein_coding MGP_LPJ_T0057137.1 MGP_LPJ_G0026339.1 mouse_genomes_project 2 125251074 125251757 + Eif3j1 protein_coding processed_transcript MGP_LPJ_T0098516.1 MGP_LPJ_G0036791.1 mouse_genomes_project 2 327503 330351 - Gm37525 sense_intronic sense_intronic MGP_LPJ_T0057830.1 MGP_LPJ_G0026508.1 mouse_genomes_project 2 144470719 146564137 + MGP_LPJ_P0057830 Macrod2 protein_coding protein_coding MGP_LPJ_T0057831.1 MGP_LPJ_G0026508.1 mouse_genomes_project 2 144470766 144796529 + MGP_LPJ_P0057831 Macrod2 protein_coding protein_coding MGP_LPJ_T0057832.1 MGP_LPJ_G0026508.1 mouse_genomes_project 2 144470766 146564137 + MGP_LPJ_P0057832 Macrod2 protein_coding protein_coding MGP_LPJ_T0057833.1 MGP_LPJ_G0026508.1 mouse_genomes_project 2 144470840 144508681 + MGP_LPJ_P0057833 Macrod2 protein_coding protein_coding MGP_LPJ_T0057834.1 MGP_LPJ_G0026508.1 mouse_genomes_project 2 144470843 144915380 + Macrod2 protein_coding retained_intron MGP_LPJ_T0057835.1 MGP_LPJ_G0026508.1 mouse_genomes_project 2 144470845 144508684 + MGP_LPJ_P0057835 Macrod2 protein_coding protein_coding MGP_LPJ_T0057836.1 MGP_LPJ_G0026508.1 mouse_genomes_project 2 144470845 146555579 + MGP_LPJ_P0057836 Macrod2 protein_coding protein_coding MGP_LPJ_T0057837.1 MGP_LPJ_G0026508.1 mouse_genomes_project 2 144470852 144599716 + Macrod2 protein_coding processed_transcript MGP_LPJ_T0057838.1 MGP_LPJ_G0026508.1 mouse_genomes_project 2 144470866 144735956 + Macrod2 protein_coding processed_transcript MGP_LPJ_T0057839.1 MGP_LPJ_G0026508.1 mouse_genomes_project 2 144470870 144506225 + Macrod2 protein_coding processed_transcript MGP_LPJ_T0057840.1 MGP_LPJ_G0026508.1 mouse_genomes_project 2 144471005 144506225 + MGP_LPJ_P0057840 Macrod2 protein_coding protein_coding MGP_LPJ_T0057844.1 MGP_LPJ_G0026508.1 mouse_genomes_project 2 145133227 145266319 + Macrod2 protein_coding processed_transcript MGP_LPJ_T0057845.1 MGP_LPJ_G0026508.1 mouse_genomes_project 2 145690318 146564137 + Macrod2 protein_coding processed_transcript MGP_LPJ_T0057846.1 MGP_LPJ_G0026508.1 mouse_genomes_project 2 146342594 146395382 + MGP_LPJ_P0057846 Macrod2 protein_coding protein_coding MGP_LPJ_T0055039.1 MGP_LPJ_G0025744.1 mouse_genomes_project 2 70399427 70436683 + MGP_LPJ_P0055039 Erich2 protein_coding protein_coding MGP_LPJ_T0055040.1 MGP_LPJ_G0025744.1 mouse_genomes_project 2 70399439 70436683 + MGP_LPJ_P0055040 Erich2 protein_coding protein_coding MGP_LPJ_T0055041.1 MGP_LPJ_G0025744.1 mouse_genomes_project 2 70400068 70433029 + Erich2 protein_coding retained_intron MGP_LPJ_T0055042.1 MGP_LPJ_G0025744.1 mouse_genomes_project 2 70400068 70417474 + Erich2 protein_coding retained_intron MGP_LPJ_T0055043.1 MGP_LPJ_G0025744.1 mouse_genomes_project 2 70400105 70422367 + MGP_LPJ_P0055043 Erich2 protein_coding protein_coding MGP_LPJ_T0013507.1 MGP_LPJ_G0011598.1 mouse_genomes_project 2 52836672 52837118 + processed_pseudogene processed_pseudogene MGP_LPJ_T0054215.1 MGP_LPJ_G0025575.1 mouse_genomes_project 2 33409023 33418715 + Cutal protein_coding retained_intron MGP_LPJ_T0054216.1 MGP_LPJ_G0025575.1 mouse_genomes_project 2 33409090 33426646 + MGP_LPJ_P0054216 Cutal protein_coding protein_coding MGP_LPJ_T0056505.1 MGP_LPJ_G0026192.1 mouse_genomes_project 2 113825766 113826705 + MGP_LPJ_P0056505 Olfr1276 protein_coding protein_coding MGP_LPJ_T0010465.1 MGP_LPJ_G0008583.1 mouse_genomes_project 2 115358877 115359017 + Gm44374 miRNA miRNA MGP_LPJ_T0057347.1 MGP_LPJ_G0026393.1 mouse_genomes_project 2 130784117 130800890 + Stard7 protein_coding processed_transcript MGP_LPJ_T0057348.1 MGP_LPJ_G0026393.1 mouse_genomes_project 2 130784481 130816212 + MGP_LPJ_P0057348 Stard7 protein_coding protein_coding MGP_LPJ_T0057349.1 MGP_LPJ_G0026393.1 mouse_genomes_project 2 130784603 130816205 + MGP_LPJ_P0057349 Stard7 protein_coding protein_coding MGP_LPJ_T0057350.1 MGP_LPJ_G0026393.1 mouse_genomes_project 2 130800539 130813115 + Stard7 protein_coding retained_intron MGP_LPJ_T0057351.1 MGP_LPJ_G0026393.1 mouse_genomes_project 2 130806316 130814586 + Stard7 protein_coding retained_intron MGP_LPJ_T0057352.1 MGP_LPJ_G0026393.1 mouse_genomes_project 2 130809381 130814611 + Stard7 protein_coding processed_transcript MGP_LPJ_T0057353.1 MGP_LPJ_G0026393.1 mouse_genomes_project 2 130809383 130814640 + Stard7 protein_coding processed_transcript MGP_LPJ_T0017790.1 MGP_LPJ_G0015375.1 mouse_genomes_project 2 122384970 122392562 - Gm14207 processed_transcript processed_transcript MGP_LPJ_T0017791.1 MGP_LPJ_G0015375.1 mouse_genomes_project 2 122384970 122391911 - Gm14207 processed_transcript processed_transcript MGP_LPJ_T0017792.1 MGP_LPJ_G0015375.1 mouse_genomes_project 2 122385129 122391932 - Gm14207 processed_transcript processed_transcript MGP_LPJ_T0052375.1 MGP_LPJ_G0025272.1 mouse_genomes_project 2 8474390 8570775 + Prkcq protein_coding retained_intron MGP_LPJ_T0052376.1 MGP_LPJ_G0025272.1 mouse_genomes_project 2 8474588 8597756 + Prkcq protein_coding retained_intron MGP_LPJ_T0052377.1 MGP_LPJ_G0025272.1 mouse_genomes_project 2 8527723 8614073 + MGP_LPJ_P0052377 Prkcq protein_coding protein_coding MGP_LPJ_T0052378.1 MGP_LPJ_G0025272.1 mouse_genomes_project 2 8531625 8613491 + MGP_LPJ_P0052378 Prkcq protein_coding protein_coding MGP_LPJ_T0052379.1 MGP_LPJ_G0025272.1 mouse_genomes_project 2 8552319 8558117 + Prkcq protein_coding retained_intron MGP_LPJ_T0052380.1 MGP_LPJ_G0025272.1 mouse_genomes_project 2 8554690 8614070 + Prkcq protein_coding processed_transcript MGP_LPJ_T0057442.1 MGP_LPJ_G0026419.1 mouse_genomes_project 2 132645644 132655661 - MGP_LPJ_P0057442 protein_coding protein_coding MGP_LPJ_T0055707.1 MGP_LPJ_G0025980.1 mouse_genomes_project 2 89172196 89173141 - MGP_LPJ_P0055707 protein_coding protein_coding MGP_LPJ_T0055708.1 MGP_LPJ_G0025980.1 mouse_genomes_project 2 89172196 89173631 - MGP_LPJ_P0055708 protein_coding protein_coding MGP_LPJ_T0013527.1 MGP_LPJ_G0011618.1 mouse_genomes_project 2 59412552 59412946 - processed_pseudogene processed_pseudogene MGP_LPJ_T0056296.1 MGP_LPJ_G0026145.1 mouse_genomes_project 2 105843386 105887573 - MGP_LPJ_P0056296 Nat10 protein_coding protein_coding MGP_LPJ_T0056297.1 MGP_LPJ_G0026145.1 mouse_genomes_project 2 105843390 105887544 - Nat10 protein_coding retained_intron MGP_LPJ_T0056298.1 MGP_LPJ_G0026145.1 mouse_genomes_project 2 105843390 105887544 - Nat10 protein_coding retained_intron MGP_LPJ_T0056299.1 MGP_LPJ_G0026145.1 mouse_genomes_project 2 105843390 105887500 - Nat10 protein_coding retained_intron MGP_LPJ_T0056300.1 MGP_LPJ_G0026145.1 mouse_genomes_project 2 105843791 105846560 - Nat10 protein_coding retained_intron MGP_LPJ_T0056301.1 MGP_LPJ_G0026145.1 mouse_genomes_project 2 105844057 105887507 - Nat10 protein_coding retained_intron MGP_LPJ_T0056302.1 MGP_LPJ_G0026145.1 mouse_genomes_project 2 105853938 105856610 - Nat10 protein_coding retained_intron MGP_LPJ_T0056303.1 MGP_LPJ_G0026145.1 mouse_genomes_project 2 105854133 105855376 - Nat10 protein_coding retained_intron MGP_LPJ_T0056304.1 MGP_LPJ_G0026145.1 mouse_genomes_project 2 105856455 105866984 - Nat10 protein_coding retained_intron MGP_LPJ_T0056305.1 MGP_LPJ_G0026145.1 mouse_genomes_project 2 105863183 105887573 - Nat10 protein_coding retained_intron MGP_LPJ_T0056306.1 MGP_LPJ_G0026145.1 mouse_genomes_project 2 105874922 105887229 - MGP_LPJ_P0056306 Nat10 protein_coding protein_coding MGP_LPJ_T0056307.1 MGP_LPJ_G0026145.1 mouse_genomes_project 2 105877771 105887564 - Nat10 protein_coding retained_intron MGP_LPJ_T0056308.1 MGP_LPJ_G0026145.1 mouse_genomes_project 2 105881899 105887498 - Nat10 protein_coding retained_intron MGP_LPJ_T0056309.1 MGP_LPJ_G0026145.1 mouse_genomes_project 2 105882036 105883277 - MGP_LPJ_P0056309 Nat10 protein_coding protein_coding MGP_LPJ_T0056532.1 MGP_LPJ_G0026219.1 mouse_genomes_project 2 114835345 114836521 + MGP_LPJ_P0056532 Olfr1317 protein_coding protein_coding MGP_LPJ_T0017764.1 MGP_LPJ_G0015364.1 mouse_genomes_project 2 105932570 105939972 - 4930547E08Rik processed_transcript processed_transcript MGP_LPJ_T0059492.1 MGP_LPJ_G0026912.1 mouse_genomes_project 2 185888906 186371432 + MGP_LPJ_P0059492 Cdh4 protein_coding protein_coding MGP_LPJ_T0059493.1 MGP_LPJ_G0026912.1 mouse_genomes_project 2 185889097 186319386 + MGP_LPJ_P0059493 Cdh4 protein_coding protein_coding MGP_LPJ_T0059494.1 MGP_LPJ_G0026912.1 mouse_genomes_project 2 185890750 186249139 + Cdh4 protein_coding processed_transcript MGP_LPJ_T0059495.1 MGP_LPJ_G0026912.1 mouse_genomes_project 2 186245157 186268346 + Cdh4 protein_coding processed_transcript MGP_LPJ_T0059496.1 MGP_LPJ_G0026912.1 mouse_genomes_project 2 186365936 186368200 + Cdh4 protein_coding retained_intron MGP_LPJ_T0059497.1 MGP_LPJ_G0026912.1 mouse_genomes_project 2 186365961 186366744 + MGP_LPJ_P0059497 Cdh4 protein_coding protein_coding MGP_LPJ_T0056950.1 MGP_LPJ_G0026310.1 mouse_genomes_project 2 123871739 123978909 - MGP_LPJ_P0056950 Ttbk2 protein_coding protein_coding MGP_LPJ_T0056951.1 MGP_LPJ_G0026310.1 mouse_genomes_project 2 123871739 123978723 - MGP_LPJ_P0056951 Ttbk2 protein_coding protein_coding MGP_LPJ_T0056952.1 MGP_LPJ_G0026310.1 mouse_genomes_project 2 123871739 123978711 - MGP_LPJ_P0056952 Ttbk2 protein_coding protein_coding MGP_LPJ_T0056953.1 MGP_LPJ_G0026310.1 mouse_genomes_project 2 123884586 123978695 - MGP_LPJ_P0056953 Ttbk2 protein_coding protein_coding MGP_LPJ_T0056954.1 MGP_LPJ_G0026310.1 mouse_genomes_project 2 123889809 123978669 - MGP_LPJ_P0056954 Ttbk2 protein_coding protein_coding MGP_LPJ_T0056955.1 MGP_LPJ_G0026310.1 mouse_genomes_project 2 123929984 123978740 - Ttbk2 protein_coding processed_transcript MGP_LPJ_T0058959.1 MGP_LPJ_G0026779.1 mouse_genomes_project 2 169750490 169751615 - MGP_LPJ_P0058959 Svs3a protein_coding protein_coding MGP_LPJ_T0058407.1 MGP_LPJ_G0026670.1 mouse_genomes_project 2 160339513 160344554 + MGP_LPJ_P0058407 Trp53inp2 protein_coding protein_coding MGP_LPJ_T0058408.1 MGP_LPJ_G0026670.1 mouse_genomes_project 2 160340268 160348274 + MGP_LPJ_P0058408 Trp53inp2 protein_coding protein_coding MGP_LPJ_T0058409.1 MGP_LPJ_G0026670.1 mouse_genomes_project 2 160340294 160345178 + MGP_LPJ_P0058409 Trp53inp2 protein_coding protein_coding MGP_LPJ_T0058410.1 MGP_LPJ_G0026670.1 mouse_genomes_project 2 160340314 160344453 + Trp53inp2 protein_coding retained_intron MGP_LPJ_T0058411.1 MGP_LPJ_G0026670.1 mouse_genomes_project 2 160340656 160344465 + MGP_LPJ_P0058411 Trp53inp2 protein_coding protein_coding MGP_LPJ_T0055568.1 MGP_LPJ_G0025862.1 mouse_genomes_project 2 86206063 86208871 - MGP_LPJ_P0055568 protein_coding protein_coding MGP_LPJ_T0013502.1 MGP_LPJ_G0011593.1 mouse_genomes_project 2 51122858 51123395 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010441.1 MGP_LPJ_G0008559.1 mouse_genomes_project 2 73065852 73065977 - Gm25960 miRNA miRNA MGP_LPJ_T0013498.1 MGP_LPJ_G0011589.1 mouse_genomes_project 2 50405034 50405858 + processed_pseudogene processed_pseudogene MGP_LPJ_T0058175.1 MGP_LPJ_G0026608.1 mouse_genomes_project 2 157343269 157343983 - MGP_LPJ_P0058175 Defb25 protein_coding protein_coding MGP_LPJ_T0056520.1 MGP_LPJ_G0026207.1 mouse_genomes_project 2 114316798 114317737 + MGP_LPJ_P0056520 protein_coding protein_coding MGP_LPJ_T0053228.1 MGP_LPJ_G0025421.1 mouse_genomes_project 2 24355908 24401784 - MGP_LPJ_P0053228 Notch1 protein_coding protein_coding MGP_LPJ_T0053229.1 MGP_LPJ_G0025421.1 mouse_genomes_project 2 24360223 24360753 - Notch1 protein_coding processed_transcript MGP_LPJ_T0053230.1 MGP_LPJ_G0025421.1 mouse_genomes_project 2 24363476 24365619 - Notch1 protein_coding processed_transcript MGP_LPJ_T0053231.1 MGP_LPJ_G0025421.1 mouse_genomes_project 2 24363476 24364660 - Notch1 protein_coding processed_transcript MGP_LPJ_T0053232.1 MGP_LPJ_G0025421.1 mouse_genomes_project 2 24363476 24364373 - Notch1 protein_coding processed_transcript MGP_LPJ_T0053233.1 MGP_LPJ_G0025421.1 mouse_genomes_project 2 24363476 24364800 - Notch1 protein_coding processed_transcript MGP_LPJ_T0053234.1 MGP_LPJ_G0025421.1 mouse_genomes_project 2 24363476 24364169 - Notch1 protein_coding processed_transcript MGP_LPJ_T0053235.1 MGP_LPJ_G0025421.1 mouse_genomes_project 2 24366548 24367755 - Notch1 protein_coding processed_transcript MGP_LPJ_T0053236.1 MGP_LPJ_G0025421.1 mouse_genomes_project 2 24367830 24368504 - Notch1 protein_coding processed_transcript MGP_LPJ_T0053237.1 MGP_LPJ_G0025421.1 mouse_genomes_project 2 24369281 24416225 - MGP_LPJ_P0053237 Notch1 protein_coding protein_coding MGP_LPJ_T0053238.1 MGP_LPJ_G0025421.1 mouse_genomes_project 2 24396114 24401786 - Notch1 protein_coding retained_intron MGP_LPJ_T0013575.1 MGP_LPJ_G0011666.1 mouse_genomes_project 2 77651200 77651806 + processed_pseudogene processed_pseudogene MGP_LPJ_T0056531.1 MGP_LPJ_G0026218.1 mouse_genomes_project 2 114800256 114800968 - MGP_LPJ_P0056531 protein_coding protein_coding MGP_LPJ_T0057731.1 MGP_LPJ_G0026483.1 mouse_genomes_project 2 136660290 136666711 - Trmt6 protein_coding retained_intron MGP_LPJ_T0057732.1 MGP_LPJ_G0026483.1 mouse_genomes_project 2 136660290 136672136 - Trmt6 protein_coding processed_transcript MGP_LPJ_T0057733.1 MGP_LPJ_G0026483.1 mouse_genomes_project 2 136660290 136672135 - MGP_LPJ_P0057733 Trmt6 protein_coding protein_coding MGP_LPJ_T0057734.1 MGP_LPJ_G0026483.1 mouse_genomes_project 2 136666492 136671839 - Trmt6 protein_coding processed_transcript MGP_LPJ_T0057735.1 MGP_LPJ_G0026483.1 mouse_genomes_project 2 136666517 136668587 - Trmt6 protein_coding processed_transcript MGP_LPJ_T0057736.1 MGP_LPJ_G0026483.1 mouse_genomes_project 2 136667845 136672094 - Trmt6 protein_coding processed_transcript MGP_LPJ_T0052484.1 MGP_LPJ_G0025283.1 mouse_genomes_project 2 10375495 10383837 - MGP_LPJ_P0052484 C1ql3 protein_coding protein_coding MGP_LPJ_T0058129.1 MGP_LPJ_G0026586.1 mouse_genomes_project 2 156763212 156777481 + MGP_LPJ_P0058129 Scrt2 protein_coding protein_coding MGP_LPJ_T0054943.1 MGP_LPJ_G0025723.1 mouse_genomes_project 2 68359057 68395638 + MGP_LPJ_P0054943 4933409G03Rik protein_coding protein_coding MGP_LPJ_T0054944.1 MGP_LPJ_G0025723.1 mouse_genomes_project 2 68372172 68393956 + MGP_LPJ_P0054944 4933409G03Rik protein_coding protein_coding MGP_LPJ_T0099319.1 MGP_LPJ_G0037582.1 mouse_genomes_project 2 23018801 23018906 + Gm22572 snRNA snRNA MGP_LPJ_T0013524.1 MGP_LPJ_G0011615.1 mouse_genomes_project 2 58524588 58525113 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004190.1 MGP_LPJ_G0003703.1 mouse_genomes_project 2 176349947 176373281 + Bcas1os2 antisense antisense MGP_LPJ_T0054565.1 MGP_LPJ_G0025653.1 mouse_genomes_project 2 48559973 48663889 + MGP_LPJ_P0054565 Epc2 protein_coding protein_coding MGP_LPJ_T0054566.1 MGP_LPJ_G0025653.1 mouse_genomes_project 2 48640773 48648980 + MGP_LPJ_P0054566 Epc2 protein_coding protein_coding MGP_LPJ_T0054334.1 MGP_LPJ_G0025599.1 mouse_genomes_project 2 35119582 35120521 + MGP_LPJ_P0054334 Olfr342 protein_coding protein_coding MGP_LPJ_T0013693.1 MGP_LPJ_G0011784.1 mouse_genomes_project 2 120195875 120196434 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099311.1 MGP_LPJ_G0037574.1 mouse_genomes_project 2 1401219 1401326 - Gm23691 snRNA snRNA MGP_LPJ_T0058335.1 MGP_LPJ_G0026652.1 mouse_genomes_project 2 159299651 159412846 + MGP_LPJ_P0058335 Cbfa2t2 protein_coding protein_coding MGP_LPJ_T0058336.1 MGP_LPJ_G0026652.1 mouse_genomes_project 2 159299654 159400173 + MGP_LPJ_P0058336 Cbfa2t2 protein_coding protein_coding MGP_LPJ_T0058337.1 MGP_LPJ_G0026652.1 mouse_genomes_project 2 159299665 159412846 + MGP_LPJ_P0058337 Cbfa2t2 protein_coding protein_coding MGP_LPJ_T0058338.1 MGP_LPJ_G0026652.1 mouse_genomes_project 2 159299705 159391574 + MGP_LPJ_P0058338 Cbfa2t2 protein_coding protein_coding MGP_LPJ_T0058339.1 MGP_LPJ_G0026652.1 mouse_genomes_project 2 159300012 159376859 + MGP_LPJ_P0058339 Cbfa2t2 protein_coding protein_coding MGP_LPJ_T0058340.1 MGP_LPJ_G0026652.1 mouse_genomes_project 2 159384299 159412846 + MGP_LPJ_P0058340 Cbfa2t2 protein_coding protein_coding MGP_LPJ_T0058341.1 MGP_LPJ_G0026652.1 mouse_genomes_project 2 159389711 159391802 + Cbfa2t2 protein_coding retained_intron MGP_LPJ_T0058342.1 MGP_LPJ_G0026652.1 mouse_genomes_project 2 159397743 159405311 + Cbfa2t2 protein_coding retained_intron MGP_LPJ_T0058343.1 MGP_LPJ_G0026652.1 mouse_genomes_project 2 159404750 159408466 + Cbfa2t2 protein_coding retained_intron MGP_LPJ_T0057180.1 MGP_LPJ_G0026356.1 mouse_genomes_project 2 125962445 125987879 - MGP_LPJ_P0057180 Slc30a4 protein_coding protein_coding MGP_LPJ_T0057181.1 MGP_LPJ_G0026356.1 mouse_genomes_project 2 125967668 125987903 - MGP_LPJ_P0057181 Slc30a4 protein_coding protein_coding MGP_LPJ_T0017677.1 MGP_LPJ_G0015310.1 mouse_genomes_project 2 10667053 10721825 + Gm13270 processed_transcript antisense MGP_LPJ_T0017678.1 MGP_LPJ_G0015310.1 mouse_genomes_project 2 10667054 10669818 + Gm13270 processed_transcript retained_intron MGP_LPJ_T0053771.1 MGP_LPJ_G0025510.1 mouse_genomes_project 2 29176935 29187766 - MGP_LPJ_P0053771 BC005624 protein_coding protein_coding MGP_LPJ_T0053772.1 MGP_LPJ_G0025510.1 mouse_genomes_project 2 29181151 29186331 - BC005624 protein_coding retained_intron MGP_LPJ_T0053773.1 MGP_LPJ_G0025510.1 mouse_genomes_project 2 29186727 29188026 - BC005624 protein_coding retained_intron MGP_LPJ_T0052508.1 MGP_LPJ_G0025288.1 mouse_genomes_project 2 11064614 11219936 - MGP_LPJ_P0052508 St8sia6 protein_coding protein_coding MGP_LPJ_T0052509.1 MGP_LPJ_G0025288.1 mouse_genomes_project 2 11070747 11219165 - St8sia6 protein_coding processed_transcript MGP_LPJ_T0017786.1 MGP_LPJ_G0015372.1 mouse_genomes_project 2 117444722 117493344 + Gm13972 processed_transcript processed_transcript MGP_LPJ_T0013803.1 MGP_LPJ_G0011894.1 mouse_genomes_project 2 162058478 162059198 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013719.1 MGP_LPJ_G0011810.1 mouse_genomes_project 2 134111485 134112318 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101306.1 MGP_LPJ_G0039526.1 mouse_genomes_project 2 51983229 51983614 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0007378.1 MGP_LPJ_G0006051.1 mouse_genomes_project 2 159613744 159615043 - Gm14216 lincRNA lincRNA MGP_LPJ_T0007379.1 MGP_LPJ_G0006051.1 mouse_genomes_project 2 159613762 159631784 - Gm14216 lincRNA lincRNA MGP_LPJ_T0010478.1 MGP_LPJ_G0008596.1 mouse_genomes_project 2 132519725 132519843 - Gm22859 miRNA miRNA MGP_LPJ_T0017734.1 MGP_LPJ_G0015344.1 mouse_genomes_project 2 71794113 71804031 + Gm13662 processed_transcript processed_transcript MGP_LPJ_T0001054.1 MGP_LPJ_G0000979.1 mouse_genomes_project 2 7273400 7275082 + TEC TEC MGP_LPJ_T0004072.1 MGP_LPJ_G0003614.1 mouse_genomes_project 2 116216959 116218583 - Gm13966 antisense antisense MGP_LPJ_T0059140.1 MGP_LPJ_G0026827.1 mouse_genomes_project 2 170978875 170994459 - MGP_LPJ_P0059140 Zfp334 protein_coding protein_coding MGP_LPJ_T0013655.1 MGP_LPJ_G0011746.1 mouse_genomes_project 2 105663104 105663534 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001053.1 MGP_LPJ_G0000978.1 mouse_genomes_project 2 6821547 6822243 - TEC TEC MGP_LPJ_T0052278.1 MGP_LPJ_G0025254.1 mouse_genomes_project 2 2924465 2951092 + MGP_LPJ_P0052278 Nudt5 protein_coding protein_coding MGP_LPJ_T0052279.1 MGP_LPJ_G0025254.1 mouse_genomes_project 2 2924480 2947945 + MGP_LPJ_P0052279 Nudt5 protein_coding protein_coding MGP_LPJ_T0052280.1 MGP_LPJ_G0025254.1 mouse_genomes_project 2 2924699 2936651 + Nudt5 protein_coding retained_intron MGP_LPJ_T0052281.1 MGP_LPJ_G0025254.1 mouse_genomes_project 2 2924699 2943679 + MGP_LPJ_P0052281 Nudt5 protein_coding protein_coding MGP_LPJ_T0052282.1 MGP_LPJ_G0025254.1 mouse_genomes_project 2 2924736 2941619 + MGP_LPJ_P0052282 Nudt5 protein_coding protein_coding MGP_LPJ_T0052283.1 MGP_LPJ_G0025254.1 mouse_genomes_project 2 2927575 2940466 + Nudt5 protein_coding processed_transcript MGP_LPJ_T0053092.1 MGP_LPJ_G0025394.1 mouse_genomes_project 2 23507265 23510815 + MGP_LPJ_P0053092 Lcn5 protein_coding protein_coding MGP_LPJ_T0053093.1 MGP_LPJ_G0025394.1 mouse_genomes_project 2 23507268 23510959 + MGP_LPJ_P0053093 Lcn5 protein_coding protein_coding MGP_LPJ_T0053094.1 MGP_LPJ_G0025394.1 mouse_genomes_project 2 23507268 23511291 + MGP_LPJ_P0053094 Lcn5 protein_coding protein_coding MGP_LPJ_T0053095.1 MGP_LPJ_G0025394.1 mouse_genomes_project 2 23510235 23510955 + Lcn5 protein_coding processed_transcript MGP_LPJ_T0007246.1 MGP_LPJ_G0005945.1 mouse_genomes_project 2 74873828 74875668 + Gm14396 lincRNA lincRNA MGP_LPJ_T0007247.1 MGP_LPJ_G0005945.1 mouse_genomes_project 2 74873909 74875668 + Gm14396 lincRNA lincRNA MGP_LPJ_T0013532.1 MGP_LPJ_G0011623.1 mouse_genomes_project 2 60026275 60027417 + processed_pseudogene processed_pseudogene MGP_LPJ_T0058063.1 MGP_LPJ_G0026571.1 mouse_genomes_project 2 155529803 155609303 - MGP_LPJ_P0058063 Ninl protein_coding protein_coding MGP_LPJ_T0058064.1 MGP_LPJ_G0026571.1 mouse_genomes_project 2 155532310 155535164 - Ninl protein_coding processed_transcript MGP_LPJ_T0058065.1 MGP_LPJ_G0026571.1 mouse_genomes_project 2 155532824 155548663 - MGP_LPJ_P0058065 Ninl protein_coding protein_coding MGP_LPJ_T0058066.1 MGP_LPJ_G0026571.1 mouse_genomes_project 2 155548361 155549795 - Ninl protein_coding retained_intron MGP_LPJ_T0058067.1 MGP_LPJ_G0026571.1 mouse_genomes_project 2 155554427 155567317 - MGP_LPJ_P0058067 Ninl protein_coding protein_coding MGP_LPJ_T0058068.1 MGP_LPJ_G0026571.1 mouse_genomes_project 2 155559594 155567451 - Ninl protein_coding processed_transcript MGP_LPJ_T0058069.1 MGP_LPJ_G0026571.1 mouse_genomes_project 2 155559686 155609237 - Ninl protein_coding processed_transcript MGP_LPJ_T0058070.1 MGP_LPJ_G0026571.1 mouse_genomes_project 2 155562407 155609281 - Ninl protein_coding processed_transcript MGP_LPJ_T0058071.1 MGP_LPJ_G0026571.1 mouse_genomes_project 2 155570359 155639034 - MGP_LPJ_P0058071 Ninl protein_coding protein_coding MGP_LPJ_T0055733.1 MGP_LPJ_G0026004.1 mouse_genomes_project 2 90044194 90045127 - MGP_LPJ_P0055733 Olfr1199 protein_coding protein_coding MGP_LPJ_T0055490.1 MGP_LPJ_G0025834.1 mouse_genomes_project 2 85157208 85163763 - MGP_LPJ_P0055490 Tmx2 protein_coding protein_coding MGP_LPJ_T0055491.1 MGP_LPJ_G0025834.1 mouse_genomes_project 2 85157400 85162978 - Tmx2 protein_coding processed_transcript MGP_LPJ_T0055492.1 MGP_LPJ_G0025834.1 mouse_genomes_project 2 85161050 85164075 - MGP_LPJ_P0055492 Tmx2 protein_coding protein_coding MGP_LPJ_T0057635.1 MGP_LPJ_G0026465.1 mouse_genomes_project 2 134949175 134954961 + Ap5s1 protein_coding processed_transcript MGP_LPJ_T0057636.1 MGP_LPJ_G0026465.1 mouse_genomes_project 2 134949183 134956294 + MGP_LPJ_P0057636 Ap5s1 protein_coding protein_coding MGP_LPJ_T0057637.1 MGP_LPJ_G0026465.1 mouse_genomes_project 2 134953883 134956560 + Ap5s1 protein_coding processed_transcript MGP_LPJ_T0057638.1 MGP_LPJ_G0026465.1 mouse_genomes_project 2 134953910 134956152 + Ap5s1 protein_coding processed_transcript MGP_LPJ_T0057639.1 MGP_LPJ_G0026465.1 mouse_genomes_project 2 134953937 134957069 + MGP_LPJ_P0057639 Ap5s1 protein_coding protein_coding MGP_LPJ_T0057640.1 MGP_LPJ_G0026465.1 mouse_genomes_project 2 134953953 134957072 + MGP_LPJ_P0057640 Ap5s1 protein_coding protein_coding MGP_LPJ_T0057641.1 MGP_LPJ_G0026465.1 mouse_genomes_project 2 134953953 134957072 + MGP_LPJ_P0057641 Ap5s1 protein_coding protein_coding MGP_LPJ_T0057642.1 MGP_LPJ_G0026465.1 mouse_genomes_project 2 134954117 134956422 + MGP_LPJ_P0057642 Ap5s1 protein_coding protein_coding MGP_LPJ_T0056983.1 MGP_LPJ_G0026315.1 mouse_genomes_project 2 124187178 124225682 - MGP_LPJ_P0056983 Tgm5 protein_coding protein_coding MGP_LPJ_T0056984.1 MGP_LPJ_G0026315.1 mouse_genomes_project 2 124214515 124225663 - Tgm5 protein_coding retained_intron MGP_LPJ_T0007331.1 MGP_LPJ_G0006012.1 mouse_genomes_project 2 127499669 127505976 - 4930517E11Rik lincRNA lincRNA MGP_LPJ_T0052729.1 MGP_LPJ_G0025328.1 mouse_genomes_project 2 20837921 20882682 + MGP_LPJ_P0052729 Yme1l1 protein_coding protein_coding MGP_LPJ_T0052730.1 MGP_LPJ_G0025328.1 mouse_genomes_project 2 20838070 20859078 + Yme1l1 protein_coding processed_transcript MGP_LPJ_T0052731.1 MGP_LPJ_G0025328.1 mouse_genomes_project 2 20838080 20842168 + Yme1l1 protein_coding processed_transcript MGP_LPJ_T0052732.1 MGP_LPJ_G0025328.1 mouse_genomes_project 2 20838385 20846584 + Yme1l1 protein_coding processed_transcript MGP_LPJ_T0052733.1 MGP_LPJ_G0025328.1 mouse_genomes_project 2 20850379 20855606 + Yme1l1 protein_coding processed_transcript MGP_LPJ_T0052734.1 MGP_LPJ_G0025328.1 mouse_genomes_project 2 20876705 20878942 + Yme1l1 protein_coding processed_transcript MGP_LPJ_T0053163.1 MGP_LPJ_G0025413.1 mouse_genomes_project 2 24213851 24242975 + MGP_LPJ_P0053163 Gpsm1 protein_coding protein_coding MGP_LPJ_T0053164.1 MGP_LPJ_G0025413.1 mouse_genomes_project 2 24213928 24242975 + MGP_LPJ_P0053164 Gpsm1 protein_coding protein_coding MGP_LPJ_T0053165.1 MGP_LPJ_G0025413.1 mouse_genomes_project 2 24219527 24242975 + MGP_LPJ_P0053165 Gpsm1 protein_coding protein_coding MGP_LPJ_T0053166.1 MGP_LPJ_G0025413.1 mouse_genomes_project 2 24223355 24242975 + MGP_LPJ_P0053166 Gpsm1 protein_coding protein_coding MGP_LPJ_T0053167.1 MGP_LPJ_G0025413.1 mouse_genomes_project 2 24225097 24227451 + Gpsm1 protein_coding processed_transcript MGP_LPJ_T0053168.1 MGP_LPJ_G0025413.1 mouse_genomes_project 2 24225608 24235156 + Gpsm1 protein_coding processed_transcript MGP_LPJ_T0053169.1 MGP_LPJ_G0025413.1 mouse_genomes_project 2 24225798 24234626 + Gpsm1 protein_coding processed_transcript MGP_LPJ_T0053170.1 MGP_LPJ_G0025413.1 mouse_genomes_project 2 24230143 24242975 + MGP_LPJ_P0053170 Gpsm1 protein_coding protein_coding MGP_LPJ_T0053171.1 MGP_LPJ_G0025413.1 mouse_genomes_project 2 24230186 24235237 + MGP_LPJ_P0053171 Gpsm1 protein_coding protein_coding MGP_LPJ_T0053172.1 MGP_LPJ_G0025413.1 mouse_genomes_project 2 24234136 24240070 + Gpsm1 protein_coding processed_transcript MGP_LPJ_T0053173.1 MGP_LPJ_G0025413.1 mouse_genomes_project 2 24234153 24239463 + Gpsm1 protein_coding processed_transcript MGP_LPJ_T0053174.1 MGP_LPJ_G0025413.1 mouse_genomes_project 2 24237024 24242011 + Gpsm1 protein_coding processed_transcript MGP_LPJ_T0053175.1 MGP_LPJ_G0025413.1 mouse_genomes_project 2 24238976 24241646 + Gpsm1 protein_coding processed_transcript MGP_LPJ_T0007296.1 MGP_LPJ_G0005984.1 mouse_genomes_project 2 106046365 106054922 + Gm13881 lincRNA lincRNA MGP_LPJ_T0004080.1 MGP_LPJ_G0003618.1 mouse_genomes_project 2 118414292 118442132 - Gm13977 antisense antisense MGP_LPJ_T0058469.1 MGP_LPJ_G0026682.1 mouse_genomes_project 2 160806476 160814598 - MGP_LPJ_P0058469 Eif6 protein_coding protein_coding MGP_LPJ_T0058470.1 MGP_LPJ_G0026682.1 mouse_genomes_project 2 160806481 160809111 - Eif6 protein_coding processed_transcript MGP_LPJ_T0058471.1 MGP_LPJ_G0026682.1 mouse_genomes_project 2 160806677 160814109 - MGP_LPJ_P0058471 Eif6 protein_coding nonsense_mediated_decay MGP_LPJ_T0058472.1 MGP_LPJ_G0026682.1 mouse_genomes_project 2 160809467 160814109 - Eif6 protein_coding retained_intron MGP_LPJ_T0058473.1 MGP_LPJ_G0026682.1 mouse_genomes_project 2 160809467 160814109 - MGP_LPJ_P0058473 Eif6 protein_coding nonsense_mediated_decay MGP_LPJ_T0058474.1 MGP_LPJ_G0026682.1 mouse_genomes_project 2 160810409 160814439 - MGP_LPJ_P0058474 Eif6 protein_coding protein_coding MGP_LPJ_T0058475.1 MGP_LPJ_G0026682.1 mouse_genomes_project 2 160812831 160814336 - MGP_LPJ_P0058475 Eif6 protein_coding protein_coding MGP_LPJ_T0058172.1 MGP_LPJ_G0026606.1 mouse_genomes_project 2 157306827 157313073 - Defb45 protein_coding processed_transcript MGP_LPJ_T0058173.1 MGP_LPJ_G0026606.1 mouse_genomes_project 2 157306827 157310156 - MGP_LPJ_P0058173 Defb45 protein_coding protein_coding MGP_LPJ_T0013680.1 MGP_LPJ_G0011771.1 mouse_genomes_project 2 112973561 112975107 - processed_pseudogene processed_pseudogene MGP_LPJ_T0058042.1 MGP_LPJ_G0026566.1 mouse_genomes_project 2 155269990 155278649 - MGP_LPJ_P0058042 Vsx1 protein_coding protein_coding MGP_LPJ_T0058037.1 MGP_LPJ_G0026565.1 mouse_genomes_project 2 155207008 155257567 - MGP_LPJ_P0058037 Acss1 protein_coding protein_coding MGP_LPJ_T0058038.1 MGP_LPJ_G0026565.1 mouse_genomes_project 2 155217231 155226307 - Acss1 protein_coding processed_transcript MGP_LPJ_T0058039.1 MGP_LPJ_G0026565.1 mouse_genomes_project 2 155217311 155226305 - Acss1 protein_coding processed_transcript MGP_LPJ_T0058040.1 MGP_LPJ_G0026565.1 mouse_genomes_project 2 155226171 155257809 - Acss1 protein_coding processed_transcript MGP_LPJ_T0058041.1 MGP_LPJ_G0026565.1 mouse_genomes_project 2 155248925 155257523 - Acss1 protein_coding retained_intron MGP_LPJ_T0054344.1 MGP_LPJ_G0025608.1 mouse_genomes_project 2 35445396 35446329 - MGP_LPJ_P0054344 Olfr351 protein_coding protein_coding MGP_LPJ_T0017741.1 MGP_LPJ_G0015351.1 mouse_genomes_project 2 85577127 85584789 - processed_transcript processed_transcript MGP_LPJ_T0001063.1 MGP_LPJ_G0000988.1 mouse_genomes_project 2 9015710 9016131 + TEC TEC MGP_LPJ_T0055632.1 MGP_LPJ_G0025915.1 mouse_genomes_project 2 87494370 87509816 - MGP_LPJ_P0055632 Olfr1085 protein_coding protein_coding MGP_LPJ_T0056672.1 MGP_LPJ_G0026256.1 mouse_genomes_project 2 121735785 121756576 - MGP_LPJ_P0056672 Plcb2 protein_coding protein_coding MGP_LPJ_T0056673.1 MGP_LPJ_G0026256.1 mouse_genomes_project 2 121736264 121756497 - MGP_LPJ_P0056673 Plcb2 protein_coding protein_coding MGP_LPJ_T0056674.1 MGP_LPJ_G0026256.1 mouse_genomes_project 2 121736448 121739639 - Plcb2 protein_coding retained_intron MGP_LPJ_T0056675.1 MGP_LPJ_G0026256.1 mouse_genomes_project 2 121736967 121738010 - Plcb2 protein_coding retained_intron MGP_LPJ_T0056676.1 MGP_LPJ_G0026256.1 mouse_genomes_project 2 121739085 121742378 - Plcb2 protein_coding retained_intron MGP_LPJ_T0056677.1 MGP_LPJ_G0026256.1 mouse_genomes_project 2 121742506 121756529 - Plcb2 protein_coding retained_intron MGP_LPJ_T0058285.1 MGP_LPJ_G0026634.1 mouse_genomes_project 2 158560618 158592266 + MGP_LPJ_P0058285 Mapre1 protein_coding protein_coding MGP_LPJ_T0058286.1 MGP_LPJ_G0026634.1 mouse_genomes_project 2 158560946 158577048 + Mapre1 protein_coding processed_transcript MGP_LPJ_T0058287.1 MGP_LPJ_G0026634.1 mouse_genomes_project 2 158564741 158575041 + Mapre1 protein_coding processed_transcript MGP_LPJ_T0013658.1 MGP_LPJ_G0011749.1 mouse_genomes_project 2 105973975 105974392 - processed_pseudogene processed_pseudogene MGP_LPJ_T0053977.1 MGP_LPJ_G0025538.1 mouse_genomes_project 2 30750476 30787497 - MGP_LPJ_P0053977 Slc25a25 protein_coding protein_coding MGP_LPJ_T0053978.1 MGP_LPJ_G0025538.1 mouse_genomes_project 2 30750476 30767092 - MGP_LPJ_P0053978 Slc25a25 protein_coding protein_coding MGP_LPJ_T0053979.1 MGP_LPJ_G0025538.1 mouse_genomes_project 2 30750479 30787520 - MGP_LPJ_P0053979 Slc25a25 protein_coding protein_coding MGP_LPJ_T0053980.1 MGP_LPJ_G0025538.1 mouse_genomes_project 2 30750959 30766725 - MGP_LPJ_P0053980 Slc25a25 protein_coding protein_coding MGP_LPJ_T0053981.1 MGP_LPJ_G0025538.1 mouse_genomes_project 2 30751049 30759995 - MGP_LPJ_P0053981 Slc25a25 protein_coding protein_coding MGP_LPJ_T0053982.1 MGP_LPJ_G0025538.1 mouse_genomes_project 2 30752198 30752561 - Slc25a25 protein_coding retained_intron MGP_LPJ_T0053983.1 MGP_LPJ_G0025538.1 mouse_genomes_project 2 30753081 30756440 - Slc25a25 protein_coding retained_intron MGP_LPJ_T0053984.1 MGP_LPJ_G0025538.1 mouse_genomes_project 2 30753161 30753820 - Slc25a25 protein_coding retained_intron MGP_LPJ_T0053985.1 MGP_LPJ_G0025538.1 mouse_genomes_project 2 30753407 30767078 - MGP_LPJ_P0053985 Slc25a25 protein_coding protein_coding MGP_LPJ_T0053986.1 MGP_LPJ_G0025538.1 mouse_genomes_project 2 30755037 30757970 - MGP_LPJ_P0053986 Slc25a25 protein_coding protein_coding MGP_LPJ_T0053987.1 MGP_LPJ_G0025538.1 mouse_genomes_project 2 30755119 30767077 - MGP_LPJ_P0053987 Slc25a25 protein_coding protein_coding MGP_LPJ_T0053988.1 MGP_LPJ_G0025538.1 mouse_genomes_project 2 30763321 30767142 - Slc25a25 protein_coding retained_intron MGP_LPJ_T0013728.1 MGP_LPJ_G0011819.1 mouse_genomes_project 2 136507431 136507886 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101314.1 MGP_LPJ_G0039533.1 mouse_genomes_project 2 165240084 165240532 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0058757.1 MGP_LPJ_G0026727.1 mouse_genomes_project 2 163463083 163482100 + Lbp protein_coding processed_transcript MGP_LPJ_T0058758.1 MGP_LPJ_G0026727.1 mouse_genomes_project 2 163463083 163466982 + MGP_LPJ_P0058758 Lbp protein_coding protein_coding MGP_LPJ_T0058759.1 MGP_LPJ_G0026727.1 mouse_genomes_project 2 163463083 163494771 + MGP_LPJ_P0058759 Lbp protein_coding protein_coding MGP_LPJ_T0058760.1 MGP_LPJ_G0026727.1 mouse_genomes_project 2 163463202 163478595 + Lbp protein_coding retained_intron MGP_LPJ_T0058761.1 MGP_LPJ_G0026727.1 mouse_genomes_project 2 163472938 163485783 + MGP_LPJ_P0058761 Lbp protein_coding protein_coding MGP_LPJ_T0100623.1 MGP_LPJ_G0038886.1 mouse_genomes_project 2 152604283 152604596 + Gm24221 snoRNA snoRNA MGP_LPJ_T0055169.1 MGP_LPJ_G0025767.1 mouse_genomes_project 2 73429593 73458534 - MGP_LPJ_P0055169 Cir1 protein_coding unknown_likely_coding MGP_LPJ_T0055170.1 MGP_LPJ_G0025767.1 mouse_genomes_project 2 73451632 73458612 - Cir1 protein_coding processed_transcript MGP_LPJ_T0053724.1 MGP_LPJ_G0025503.1 mouse_genomes_project 2 28981957 28990816 - 1700001O22Rik protein_coding processed_transcript MGP_LPJ_T0053725.1 MGP_LPJ_G0025503.1 mouse_genomes_project 2 28982489 28988892 - MGP_LPJ_P0053725 1700001O22Rik protein_coding protein_coding MGP_LPJ_T0053726.1 MGP_LPJ_G0025503.1 mouse_genomes_project 2 28982656 28983853 - 1700001O22Rik protein_coding processed_transcript MGP_LPJ_T0053727.1 MGP_LPJ_G0025503.1 mouse_genomes_project 2 28982751 28990842 - 1700001O22Rik protein_coding processed_transcript MGP_LPJ_T0053728.1 MGP_LPJ_G0025503.1 mouse_genomes_project 2 28982754 28990825 - 1700001O22Rik protein_coding processed_transcript MGP_LPJ_T0053729.1 MGP_LPJ_G0025503.1 mouse_genomes_project 2 28982761 28988186 - 1700001O22Rik protein_coding processed_transcript MGP_LPJ_T0053730.1 MGP_LPJ_G0025503.1 mouse_genomes_project 2 28982768 28990838 - 1700001O22Rik protein_coding processed_transcript MGP_LPJ_T0053731.1 MGP_LPJ_G0025503.1 mouse_genomes_project 2 28982792 28990824 - 1700001O22Rik protein_coding processed_transcript MGP_LPJ_T0053732.1 MGP_LPJ_G0025503.1 mouse_genomes_project 2 28982845 28990825 - 1700001O22Rik protein_coding processed_transcript MGP_LPJ_T0053733.1 MGP_LPJ_G0025503.1 mouse_genomes_project 2 28982862 28984064 - 1700001O22Rik protein_coding processed_transcript MGP_LPJ_T0053734.1 MGP_LPJ_G0025503.1 mouse_genomes_project 2 28983296 28990825 - 1700001O22Rik protein_coding processed_transcript MGP_LPJ_T0053735.1 MGP_LPJ_G0025503.1 mouse_genomes_project 2 28983370 28990825 - 1700001O22Rik protein_coding processed_transcript MGP_LPJ_T0053736.1 MGP_LPJ_G0025503.1 mouse_genomes_project 2 28984441 28990804 - 1700001O22Rik protein_coding processed_transcript MGP_LPJ_T0055586.1 MGP_LPJ_G0025871.1 mouse_genomes_project 2 86483195 86484140 + MGP_LPJ_P0055586 Olfr1009 protein_coding protein_coding MGP_LPJ_T0055425.1 MGP_LPJ_G0025822.1 mouse_genomes_project 2 83455456 83524401 + MGP_LPJ_P0055425 Fsip2 protein_coding protein_coding MGP_LPJ_T0055426.1 MGP_LPJ_G0025822.1 mouse_genomes_project 2 83461767 83480257 + MGP_LPJ_P0055426 Fsip2 protein_coding nonsense_mediated_decay MGP_LPJ_T0055427.1 MGP_LPJ_G0025822.1 mouse_genomes_project 2 83494927 83524401 + MGP_LPJ_P0055427 Fsip2 protein_coding nonsense_mediated_decay MGP_LPJ_T0017776.1 MGP_LPJ_G0015369.1 mouse_genomes_project 2 116171164 116185769 + Gm13965 processed_transcript processed_transcript MGP_LPJ_T0003941.1 MGP_LPJ_G0003522.1 mouse_genomes_project 2 24546439 24556194 + antisense antisense MGP_LPJ_T0003942.1 MGP_LPJ_G0003522.1 mouse_genomes_project 2 24553564 24556194 + antisense antisense MGP_LPJ_T0003943.1 MGP_LPJ_G0003522.1 mouse_genomes_project 2 24554138 24556194 + antisense antisense MGP_LPJ_T0102066.1 MGP_LPJ_G0040103.1 mouse_genomes_project 2 125280251 125282605 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0100568.1 MGP_LPJ_G0038831.1 mouse_genomes_project 2 24827062 24827136 + Gm23969 snoRNA snoRNA MGP_LPJ_T0007304.1 MGP_LPJ_G0005992.1 mouse_genomes_project 2 113615229 113621752 - Gm13942 lincRNA lincRNA MGP_LPJ_T0057188.1 MGP_LPJ_G0026358.1 mouse_genomes_project 2 126054741 126103375 + MGP_LPJ_P0057188 Sqrdl protein_coding protein_coding MGP_LPJ_T0057189.1 MGP_LPJ_G0026358.1 mouse_genomes_project 2 126054893 126076083 + MGP_LPJ_P0057189 Sqrdl protein_coding protein_coding MGP_LPJ_T0057190.1 MGP_LPJ_G0026358.1 mouse_genomes_project 2 126054895 126076090 + MGP_LPJ_P0057190 Sqrdl protein_coding protein_coding MGP_LPJ_T0057191.1 MGP_LPJ_G0026358.1 mouse_genomes_project 2 126054913 126058053 + Sqrdl protein_coding processed_transcript MGP_LPJ_T0057192.1 MGP_LPJ_G0026358.1 mouse_genomes_project 2 126062395 126093296 + Sqrdl protein_coding retained_intron MGP_LPJ_T0057193.1 MGP_LPJ_G0026358.1 mouse_genomes_project 2 126072982 126103359 + MGP_LPJ_P0057193 Sqrdl protein_coding protein_coding MGP_LPJ_T0057194.1 MGP_LPJ_G0026358.1 mouse_genomes_project 2 126075938 126078958 + Sqrdl protein_coding processed_transcript MGP_LPJ_T0057195.1 MGP_LPJ_G0026358.1 mouse_genomes_project 2 126075955 126103144 + MGP_LPJ_P0057195 Sqrdl protein_coding nonsense_mediated_decay MGP_LPJ_T0057196.1 MGP_LPJ_G0026358.1 mouse_genomes_project 2 126090961 126103365 + MGP_LPJ_P0057196 Sqrdl protein_coding protein_coding MGP_LPJ_T0004161.1 MGP_LPJ_G0003682.1 mouse_genomes_project 2 163788005 163788916 - Gm14205 antisense antisense MGP_LPJ_T0055083.1 MGP_LPJ_G0025752.1 mouse_genomes_project 2 71157073 71214314 + MGP_LPJ_P0055083 Dync1i2 protein_coding protein_coding MGP_LPJ_T0055084.1 MGP_LPJ_G0025752.1 mouse_genomes_project 2 71157108 71214310 + MGP_LPJ_P0055084 Dync1i2 protein_coding protein_coding MGP_LPJ_T0055085.1 MGP_LPJ_G0025752.1 mouse_genomes_project 2 71157108 71214319 + MGP_LPJ_P0055085 Dync1i2 protein_coding protein_coding MGP_LPJ_T0055086.1 MGP_LPJ_G0025752.1 mouse_genomes_project 2 71157125 71214307 + MGP_LPJ_P0055086 Dync1i2 protein_coding protein_coding MGP_LPJ_T0055087.1 MGP_LPJ_G0025752.1 mouse_genomes_project 2 71157173 71196452 + Dync1i2 protein_coding processed_transcript MGP_LPJ_T0055088.1 MGP_LPJ_G0025752.1 mouse_genomes_project 2 71157201 71214319 + MGP_LPJ_P0055088 Dync1i2 protein_coding protein_coding MGP_LPJ_T0055089.1 MGP_LPJ_G0025752.1 mouse_genomes_project 2 71157339 71214313 + MGP_LPJ_P0055089 Dync1i2 protein_coding protein_coding MGP_LPJ_T0055090.1 MGP_LPJ_G0025752.1 mouse_genomes_project 2 71157351 71213875 + MGP_LPJ_P0055090 Dync1i2 protein_coding protein_coding MGP_LPJ_T0055091.1 MGP_LPJ_G0025752.1 mouse_genomes_project 2 71157359 71214319 + MGP_LPJ_P0055091 Dync1i2 protein_coding protein_coding MGP_LPJ_T0055092.1 MGP_LPJ_G0025752.1 mouse_genomes_project 2 71157371 71177972 + Dync1i2 protein_coding retained_intron MGP_LPJ_T0055093.1 MGP_LPJ_G0025752.1 mouse_genomes_project 2 71184234 71211459 + Dync1i2 protein_coding retained_intron MGP_LPJ_T0055094.1 MGP_LPJ_G0025752.1 mouse_genomes_project 2 71211562 71214074 + Dync1i2 protein_coding retained_intron MGP_LPJ_T0010474.1 MGP_LPJ_G0008592.1 mouse_genomes_project 2 125922853 125922932 + Mir147 miRNA miRNA MGP_LPJ_T0001058.1 MGP_LPJ_G0000983.1 mouse_genomes_project 2 8532051 8534616 + TEC TEC MGP_LPJ_T0059040.1 MGP_LPJ_G0026810.1 mouse_genomes_project 2 170365466 170384800 + MGP_LPJ_P0059040 Zswim3 protein_coding protein_coding MGP_LPJ_T0017704.1 MGP_LPJ_G0015325.1 mouse_genomes_project 2 27830255 27832589 - processed_transcript processed_transcript MGP_LPJ_T0007252.1 MGP_LPJ_G0005949.1 mouse_genomes_project 2 75323074 75339660 - Gm13652 lincRNA lincRNA MGP_LPJ_T0055710.1 MGP_LPJ_G0025982.1 mouse_genomes_project 2 89223230 89224211 - MGP_LPJ_P0055710 Olfr1164 protein_coding protein_coding MGP_LPJ_T0007395.1 MGP_LPJ_G0006065.1 mouse_genomes_project 2 166672771 166673711 + Gm14241 lincRNA lincRNA MGP_LPJ_T0058052.1 MGP_LPJ_G0026569.1 mouse_genomes_project 2 155422455 155432558 - Abhd12 protein_coding processed_transcript MGP_LPJ_T0058053.1 MGP_LPJ_G0026569.1 mouse_genomes_project 2 155422455 155495601 - MGP_LPJ_P0058053 Abhd12 protein_coding protein_coding MGP_LPJ_T0058054.1 MGP_LPJ_G0026569.1 mouse_genomes_project 2 155422479 155495591 - MGP_LPJ_P0058054 Abhd12 protein_coding nonsense_mediated_decay MGP_LPJ_T0058055.1 MGP_LPJ_G0026569.1 mouse_genomes_project 2 155423078 155429703 - MGP_LPJ_P0058055 Abhd12 protein_coding nonsense_mediated_decay MGP_LPJ_T0058056.1 MGP_LPJ_G0026569.1 mouse_genomes_project 2 155427321 155495522 - Abhd12 protein_coding processed_transcript MGP_LPJ_T0058057.1 MGP_LPJ_G0026569.1 mouse_genomes_project 2 155433025 155441484 - Abhd12 protein_coding retained_intron MGP_LPJ_T0058058.1 MGP_LPJ_G0026569.1 mouse_genomes_project 2 155436313 155495507 - MGP_LPJ_P0058058 Abhd12 protein_coding nonsense_mediated_decay MGP_LPJ_T0007385.1 MGP_LPJ_G0006057.1 mouse_genomes_project 2 161881177 161888000 - Gm14230 lincRNA lincRNA MGP_LPJ_T0007386.1 MGP_LPJ_G0006057.1 mouse_genomes_project 2 161886001 161888072 - Gm14230 lincRNA lincRNA MGP_LPJ_T0007387.1 MGP_LPJ_G0006057.1 mouse_genomes_project 2 161886651 161887980 - Gm14230 lincRNA lincRNA MGP_LPJ_T0010400.1 MGP_LPJ_G0008518.1 mouse_genomes_project 2 20326199 20326294 + Gm23636 miRNA miRNA MGP_LPJ_T0013714.1 MGP_LPJ_G0011805.1 mouse_genomes_project 2 132182184 132182394 + processed_pseudogene processed_pseudogene MGP_LPJ_T0054966.1 MGP_LPJ_G0025728.1 mouse_genomes_project 2 69008121 69025125 + G6pc2 protein_coding processed_transcript MGP_LPJ_T0054967.1 MGP_LPJ_G0025728.1 mouse_genomes_project 2 69018411 69026282 + MGP_LPJ_P0054967 G6pc2 protein_coding protein_coding MGP_LPJ_T0054968.1 MGP_LPJ_G0025728.1 mouse_genomes_project 2 69018438 69026282 + MGP_LPJ_P0054968 G6pc2 protein_coding protein_coding MGP_LPJ_T0054969.1 MGP_LPJ_G0025728.1 mouse_genomes_project 2 69018468 69025277 + G6pc2 protein_coding processed_transcript MGP_LPJ_T0013763.1 MGP_LPJ_G0011854.1 mouse_genomes_project 2 151539086 151539891 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055613.1 MGP_LPJ_G0025897.1 mouse_genomes_project 2 86977104 86978052 - MGP_LPJ_P0055613 Olfr1045 protein_coding protein_coding MGP_LPJ_T0058258.1 MGP_LPJ_G0026629.1 mouse_genomes_project 2 158131452 158195777 + MGP_LPJ_P0058258 Asxl1 protein_coding protein_coding MGP_LPJ_T0058259.1 MGP_LPJ_G0026629.1 mouse_genomes_project 2 158131941 158194566 + MGP_LPJ_P0058259 Asxl1 protein_coding unknown_likely_coding MGP_LPJ_T0058260.1 MGP_LPJ_G0026629.1 mouse_genomes_project 2 158133282 158143786 + Asxl1 protein_coding processed_transcript MGP_LPJ_T0058261.1 MGP_LPJ_G0026629.1 mouse_genomes_project 2 158133410 158182315 + Asxl1 protein_coding processed_transcript MGP_LPJ_T0058262.1 MGP_LPJ_G0026629.1 mouse_genomes_project 2 158183580 158187558 + Asxl1 protein_coding retained_intron MGP_LPJ_T0054437.1 MGP_LPJ_G0025637.1 mouse_genomes_project 2 37596411 37633839 + MGP_LPJ_P0054437 Olfml2a protein_coding protein_coding MGP_LPJ_T0052735.1 MGP_LPJ_G0025329.1 mouse_genomes_project 2 20890888 20951955 + MGP_LPJ_P0052735 4931423N10Rik protein_coding protein_coding MGP_LPJ_T0052736.1 MGP_LPJ_G0025329.1 mouse_genomes_project 2 20890909 20949458 + MGP_LPJ_P0052736 4931423N10Rik protein_coding protein_coding MGP_LPJ_T0053944.1 MGP_LPJ_G0025534.1 mouse_genomes_project 2 30677489 30705223 + MGP_LPJ_P0053944 Ciz1 protein_coding protein_coding MGP_LPJ_T0053945.1 MGP_LPJ_G0025534.1 mouse_genomes_project 2 30688162 30692560 + Ciz1 protein_coding processed_transcript MGP_LPJ_T0053946.1 MGP_LPJ_G0025534.1 mouse_genomes_project 2 30688162 30692681 + MGP_LPJ_P0053946 Ciz1 protein_coding protein_coding MGP_LPJ_T0053947.1 MGP_LPJ_G0025534.1 mouse_genomes_project 2 30688213 30695630 + MGP_LPJ_P0053947 Ciz1 protein_coding protein_coding MGP_LPJ_T0053948.1 MGP_LPJ_G0025534.1 mouse_genomes_project 2 30688350 30705229 + MGP_LPJ_P0053948 Ciz1 protein_coding protein_coding MGP_LPJ_T0053949.1 MGP_LPJ_G0025534.1 mouse_genomes_project 2 30688350 30705223 + MGP_LPJ_P0053949 Ciz1 protein_coding protein_coding MGP_LPJ_T0053950.1 MGP_LPJ_G0025534.1 mouse_genomes_project 2 30688505 30708836 + Ciz1 protein_coding retained_intron MGP_LPJ_T0053951.1 MGP_LPJ_G0025534.1 mouse_genomes_project 2 30688585 30691004 + Ciz1 protein_coding processed_transcript MGP_LPJ_T0053952.1 MGP_LPJ_G0025534.1 mouse_genomes_project 2 30688706 30695831 + MGP_LPJ_P0053952 Ciz1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053953.1 MGP_LPJ_G0025534.1 mouse_genomes_project 2 30688908 30690140 + Ciz1 protein_coding retained_intron MGP_LPJ_T0053954.1 MGP_LPJ_G0025534.1 mouse_genomes_project 2 30688957 30705229 + MGP_LPJ_P0053954 Ciz1 protein_coding protein_coding MGP_LPJ_T0053955.1 MGP_LPJ_G0025534.1 mouse_genomes_project 2 30688962 30705224 + MGP_LPJ_P0053955 Ciz1 protein_coding protein_coding MGP_LPJ_T0053956.1 MGP_LPJ_G0025534.1 mouse_genomes_project 2 30690497 30692667 + Ciz1 protein_coding retained_intron MGP_LPJ_T0053957.1 MGP_LPJ_G0025534.1 mouse_genomes_project 2 30692564 30696801 + MGP_LPJ_P0053957 Ciz1 protein_coding protein_coding MGP_LPJ_T0053958.1 MGP_LPJ_G0025534.1 mouse_genomes_project 2 30692624 30697813 + MGP_LPJ_P0053958 Ciz1 protein_coding protein_coding MGP_LPJ_T0053959.1 MGP_LPJ_G0025534.1 mouse_genomes_project 2 30695569 30697258 + Ciz1 protein_coding processed_transcript MGP_LPJ_T0053960.1 MGP_LPJ_G0025534.1 mouse_genomes_project 2 30696416 30702464 + MGP_LPJ_P0053960 Ciz1 protein_coding protein_coding MGP_LPJ_T0053961.1 MGP_LPJ_G0025534.1 mouse_genomes_project 2 30697342 30701482 + Ciz1 protein_coding retained_intron MGP_LPJ_T0053962.1 MGP_LPJ_G0025534.1 mouse_genomes_project 2 30697824 30701926 + Ciz1 protein_coding retained_intron MGP_LPJ_T0053963.1 MGP_LPJ_G0025534.1 mouse_genomes_project 2 30701134 30705225 + Ciz1 protein_coding retained_intron MGP_LPJ_T0053964.1 MGP_LPJ_G0025534.1 mouse_genomes_project 2 30702033 30703316 + Ciz1 protein_coding retained_intron MGP_LPJ_T0053965.1 MGP_LPJ_G0025534.1 mouse_genomes_project 2 30702414 30708092 + MGP_LPJ_P0053965 Ciz1 protein_coding protein_coding MGP_LPJ_T0007352.1 MGP_LPJ_G0006030.1 mouse_genomes_project 2 141158549 141159299 + Gm28214 lincRNA lincRNA MGP_LPJ_T0013534.1 MGP_LPJ_G0011625.1 mouse_genomes_project 2 60495188 60495808 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099348.1 MGP_LPJ_G0037611.1 mouse_genomes_project 2 121070112 121070270 - Gm25308 snRNA snRNA MGP_LPJ_T0007424.1 MGP_LPJ_G0006090.1 mouse_genomes_project 2 174929209 174930570 + Gm9873 lincRNA lincRNA MGP_LPJ_T0007425.1 MGP_LPJ_G0006090.1 mouse_genomes_project 2 174929454 174930551 + Gm9873 lincRNA lincRNA MGP_LPJ_T0056704.1 MGP_LPJ_G0026262.1 mouse_genomes_project 2 121936560 121952651 + MGP_LPJ_P0056704 Bahd1 protein_coding protein_coding MGP_LPJ_T0056705.1 MGP_LPJ_G0026262.1 mouse_genomes_project 2 121937636 121960718 + MGP_LPJ_P0056705 Bahd1 protein_coding protein_coding MGP_LPJ_T0057036.1 MGP_LPJ_G0026323.1 mouse_genomes_project 2 124455742 124501873 - MGP_LPJ_P0057036 Ppip5k1 protein_coding protein_coding MGP_LPJ_T0057037.1 MGP_LPJ_G0026323.1 mouse_genomes_project 2 124455742 124497540 - MGP_LPJ_P0057037 Ppip5k1 protein_coding protein_coding MGP_LPJ_T0057038.1 MGP_LPJ_G0026323.1 mouse_genomes_project 2 124455742 124501870 - MGP_LPJ_P0057038 Ppip5k1 protein_coding protein_coding MGP_LPJ_T0057039.1 MGP_LPJ_G0026323.1 mouse_genomes_project 2 124456070 124497508 - MGP_LPJ_P0057039 Ppip5k1 protein_coding protein_coding MGP_LPJ_T0057040.1 MGP_LPJ_G0026323.1 mouse_genomes_project 2 124456076 124501936 - MGP_LPJ_P0057040 Ppip5k1 protein_coding protein_coding MGP_LPJ_T0057041.1 MGP_LPJ_G0026323.1 mouse_genomes_project 2 124466803 124483713 - MGP_LPJ_P0057041 Ppip5k1 protein_coding protein_coding MGP_LPJ_T0057042.1 MGP_LPJ_G0026323.1 mouse_genomes_project 2 124466838 124481301 - MGP_LPJ_P0057042 Ppip5k1 protein_coding protein_coding MGP_LPJ_T0057043.1 MGP_LPJ_G0026323.1 mouse_genomes_project 2 124466916 124483283 - MGP_LPJ_P0057043 Ppip5k1 protein_coding protein_coding MGP_LPJ_T0057044.1 MGP_LPJ_G0026323.1 mouse_genomes_project 2 124472783 124483709 - MGP_LPJ_P0057044 Ppip5k1 protein_coding protein_coding MGP_LPJ_T0057045.1 MGP_LPJ_G0026323.1 mouse_genomes_project 2 124473564 124483573 - Ppip5k1 protein_coding retained_intron MGP_LPJ_T0057046.1 MGP_LPJ_G0026323.1 mouse_genomes_project 2 124478921 124501617 - Ppip5k1 protein_coding retained_intron MGP_LPJ_T0057047.1 MGP_LPJ_G0026323.1 mouse_genomes_project 2 124481041 124488529 - Ppip5k1 protein_coding retained_intron MGP_LPJ_T0057048.1 MGP_LPJ_G0026323.1 mouse_genomes_project 2 124486914 124501851 - Ppip5k1 protein_coding retained_intron MGP_LPJ_T0057049.1 MGP_LPJ_G0026323.1 mouse_genomes_project 2 124490079 124495314 - MGP_LPJ_P0057049 Ppip5k1 protein_coding nonsense_mediated_decay MGP_LPJ_T0057050.1 MGP_LPJ_G0026323.1 mouse_genomes_project 2 124493129 124501870 - Ppip5k1 protein_coding retained_intron MGP_LPJ_T0057051.1 MGP_LPJ_G0026323.1 mouse_genomes_project 2 124493550 124501615 - Ppip5k1 protein_coding retained_intron MGP_LPJ_T0057052.1 MGP_LPJ_G0026323.1 mouse_genomes_project 2 124494714 124501612 - Ppip5k1 protein_coding retained_intron MGP_LPJ_T0057053.1 MGP_LPJ_G0026323.1 mouse_genomes_project 2 124496999 124501824 - MGP_LPJ_P0057053 Ppip5k1 protein_coding protein_coding MGP_LPJ_T0013590.1 MGP_LPJ_G0011681.1 mouse_genomes_project 2 81377350 81391374 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100564.1 MGP_LPJ_G0038827.1 mouse_genomes_project 2 20573329 20573449 + Gm25544 snoRNA snoRNA MGP_LPJ_T0058001.1 MGP_LPJ_G0026549.1 mouse_genomes_project 2 153238950 153244053 + MGP_LPJ_P0058001 Cstl1 protein_coding protein_coding MGP_LPJ_T0058002.1 MGP_LPJ_G0026549.1 mouse_genomes_project 2 153238953 153243998 + MGP_LPJ_P0058002 Cstl1 protein_coding protein_coding MGP_LPJ_T0058003.1 MGP_LPJ_G0026549.1 mouse_genomes_project 2 153238988 153243998 + MGP_LPJ_P0058003 Cstl1 protein_coding protein_coding MGP_LPJ_T0055609.1 MGP_LPJ_G0025893.1 mouse_genomes_project 2 86932774 86935189 - MGP_LPJ_P0055609 Olfr1042 protein_coding protein_coding MGP_LPJ_T0102074.1 MGP_LPJ_G0040111.1 mouse_genomes_project 2 158871831 158876194 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0057182.1 MGP_LPJ_G0026357.1 mouse_genomes_project 2 126028114 126039134 + MGP_LPJ_P0057182 Bloc1s6 protein_coding protein_coding MGP_LPJ_T0057183.1 MGP_LPJ_G0026357.1 mouse_genomes_project 2 126028124 126035636 + Bloc1s6 protein_coding processed_transcript MGP_LPJ_T0057184.1 MGP_LPJ_G0026357.1 mouse_genomes_project 2 126028130 126037757 + Bloc1s6 protein_coding processed_transcript MGP_LPJ_T0057185.1 MGP_LPJ_G0026357.1 mouse_genomes_project 2 126028138 126028768 + Bloc1s6 protein_coding processed_transcript MGP_LPJ_T0057186.1 MGP_LPJ_G0026357.1 mouse_genomes_project 2 126028141 126035702 + Bloc1s6 protein_coding processed_transcript MGP_LPJ_T0057187.1 MGP_LPJ_G0026357.1 mouse_genomes_project 2 126028170 126036662 + Bloc1s6 protein_coding processed_transcript MGP_LPJ_T0056487.1 MGP_LPJ_G0026183.1 mouse_genomes_project 2 112807457 112852752 - MGP_LPJ_P0056487 Bbox1 protein_coding protein_coding MGP_LPJ_T0056488.1 MGP_LPJ_G0026183.1 mouse_genomes_project 2 112839857 112862258 - MGP_LPJ_P0056488 Bbox1 protein_coding protein_coding MGP_LPJ_T0055721.1 MGP_LPJ_G0025993.1 mouse_genomes_project 2 89715170 89716082 + MGP_LPJ_P0055721 Olfr1183 protein_coding protein_coding MGP_LPJ_T0055593.1 MGP_LPJ_G0025878.1 mouse_genomes_project 2 86609454 86615933 + MGP_LPJ_P0055593 Olfr1020 protein_coding protein_coding MGP_LPJ_T0054497.1 MGP_LPJ_G0025648.1 mouse_genomes_project 2 43401910 43614969 - MGP_LPJ_P0054497 Gtdc1 protein_coding protein_coding MGP_LPJ_T0054498.1 MGP_LPJ_G0025648.1 mouse_genomes_project 2 43402628 43410143 - Gtdc1 protein_coding processed_transcript MGP_LPJ_T0054499.1 MGP_LPJ_G0025648.1 mouse_genomes_project 2 43402946 43731189 - MGP_LPJ_P0054499 Gtdc1 protein_coding protein_coding MGP_LPJ_T0054500.1 MGP_LPJ_G0025648.1 mouse_genomes_project 2 43409165 43410510 - Gtdc1 protein_coding processed_transcript MGP_LPJ_T0054501.1 MGP_LPJ_G0025648.1 mouse_genomes_project 2 43414273 43790556 - MGP_LPJ_P0054501 Gtdc1 protein_coding protein_coding MGP_LPJ_T0054502.1 MGP_LPJ_G0025648.1 mouse_genomes_project 2 43491540 43790614 - Gtdc1 protein_coding processed_transcript MGP_LPJ_T0054503.1 MGP_LPJ_G0025648.1 mouse_genomes_project 2 43493675 43791007 - MGP_LPJ_P0054503 Gtdc1 protein_coding protein_coding MGP_LPJ_T0054504.1 MGP_LPJ_G0025648.1 mouse_genomes_project 2 43610426 43683623 - Gtdc1 protein_coding processed_transcript MGP_LPJ_T0054505.1 MGP_LPJ_G0025648.1 mouse_genomes_project 2 43643095 43790569 - MGP_LPJ_P0054505 Gtdc1 protein_coding protein_coding MGP_LPJ_T0054506.1 MGP_LPJ_G0025648.1 mouse_genomes_project 2 43646008 43790569 - Gtdc1 protein_coding processed_transcript MGP_LPJ_T0054507.1 MGP_LPJ_G0025648.1 mouse_genomes_project 2 43648473 43790544 - Gtdc1 protein_coding processed_transcript MGP_LPJ_T0052885.1 MGP_LPJ_G0025355.1 mouse_genomes_project 2 23022385 23023830 - Stpg3 protein_coding processed_transcript MGP_LPJ_T0052886.1 MGP_LPJ_G0025355.1 mouse_genomes_project 2 23022386 23024810 - Stpg3 protein_coding processed_transcript MGP_LPJ_T0052887.1 MGP_LPJ_G0025355.1 mouse_genomes_project 2 23022737 23024809 - MGP_LPJ_P0052887 Stpg3 protein_coding protein_coding MGP_LPJ_T0052888.1 MGP_LPJ_G0025355.1 mouse_genomes_project 2 23022940 23024816 - MGP_LPJ_P0052888 Stpg3 protein_coding protein_coding MGP_LPJ_T0052889.1 MGP_LPJ_G0025355.1 mouse_genomes_project 2 23023096 23024770 - Stpg3 protein_coding processed_transcript MGP_LPJ_T0056113.1 MGP_LPJ_G0026109.1 mouse_genomes_project 2 94240651 94256202 + MGP_LPJ_P0056113 Chst1 protein_coding protein_coding MGP_LPJ_T0053089.1 MGP_LPJ_G0025392.1 mouse_genomes_project 2 23467227 23470592 - MGP_LPJ_P0053089 Fcna protein_coding protein_coding MGP_LPJ_T0053090.1 MGP_LPJ_G0025392.1 mouse_genomes_project 2 23467526 23469850 - Fcna protein_coding processed_transcript MGP_LPJ_T0055612.1 MGP_LPJ_G0025896.1 mouse_genomes_project 2 86957575 86958535 - MGP_LPJ_P0055612 Olfr52 protein_coding protein_coding MGP_LPJ_T0100569.1 MGP_LPJ_G0038832.1 mouse_genomes_project 2 24828019 24828093 + Gm22879 snoRNA snoRNA MGP_LPJ_T0059695.1 MGP_LPJ_G0026952.1 mouse_genomes_project 2 187970769 187978361 - MGP_LPJ_P0059695 Arfrp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0059696.1 MGP_LPJ_G0026952.1 mouse_genomes_project 2 187970825 187973081 - Arfrp1 protein_coding retained_intron MGP_LPJ_T0059697.1 MGP_LPJ_G0026952.1 mouse_genomes_project 2 187972255 187978353 - Arfrp1 protein_coding retained_intron MGP_LPJ_T0059698.1 MGP_LPJ_G0026952.1 mouse_genomes_project 2 187972368 187978339 - Arfrp1 protein_coding retained_intron MGP_LPJ_T0059699.1 MGP_LPJ_G0026952.1 mouse_genomes_project 2 187972414 187978279 - MGP_LPJ_P0059699 Arfrp1 protein_coding protein_coding MGP_LPJ_T0059700.1 MGP_LPJ_G0026952.1 mouse_genomes_project 2 187972442 187977830 - Arfrp1 protein_coding retained_intron MGP_LPJ_T0059701.1 MGP_LPJ_G0026952.1 mouse_genomes_project 2 187972649 187978380 - Arfrp1 protein_coding retained_intron MGP_LPJ_T0059702.1 MGP_LPJ_G0026952.1 mouse_genomes_project 2 187972655 187978357 - MGP_LPJ_P0059702 Arfrp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0059703.1 MGP_LPJ_G0026952.1 mouse_genomes_project 2 187974389 187978286 - Arfrp1 protein_coding processed_transcript MGP_LPJ_T0059704.1 MGP_LPJ_G0026952.1 mouse_genomes_project 2 187977308 187978370 - Arfrp1 protein_coding retained_intron MGP_LPJ_T0013489.1 MGP_LPJ_G0011580.1 mouse_genomes_project 2 47871178 47872149 - processed_pseudogene processed_pseudogene MGP_LPJ_T0058767.1 MGP_LPJ_G0026729.1 mouse_genomes_project 2 163575986 163667666 + MGP_LPJ_P0058767 Ralgapb protein_coding protein_coding MGP_LPJ_T0058768.1 MGP_LPJ_G0026729.1 mouse_genomes_project 2 163575991 163667666 + MGP_LPJ_P0058768 Ralgapb protein_coding protein_coding MGP_LPJ_T0058769.1 MGP_LPJ_G0026729.1 mouse_genomes_project 2 163576014 163594165 + Ralgapb protein_coding retained_intron MGP_LPJ_T0058770.1 MGP_LPJ_G0026729.1 mouse_genomes_project 2 163576017 163605745 + Ralgapb protein_coding retained_intron MGP_LPJ_T0058771.1 MGP_LPJ_G0026729.1 mouse_genomes_project 2 163576020 163609391 + Ralgapb protein_coding processed_transcript MGP_LPJ_T0058772.1 MGP_LPJ_G0026729.1 mouse_genomes_project 2 163576089 163666059 + MGP_LPJ_P0058772 Ralgapb protein_coding protein_coding MGP_LPJ_T0058773.1 MGP_LPJ_G0026729.1 mouse_genomes_project 2 163576240 163587013 + MGP_LPJ_P0058773 Ralgapb protein_coding protein_coding MGP_LPJ_T0058774.1 MGP_LPJ_G0026729.1 mouse_genomes_project 2 163602652 163667666 + MGP_LPJ_P0058774 Ralgapb protein_coding protein_coding MGP_LPJ_T0058775.1 MGP_LPJ_G0026729.1 mouse_genomes_project 2 163634509 163641498 + Ralgapb protein_coding retained_intron MGP_LPJ_T0058776.1 MGP_LPJ_G0026729.1 mouse_genomes_project 2 163645803 163652778 + Ralgapb protein_coding processed_transcript MGP_LPJ_T0001066.1 MGP_LPJ_G0000991.1 mouse_genomes_project 2 9740794 9743406 - TEC TEC MGP_LPJ_T0007403.1 MGP_LPJ_G0006073.1 mouse_genomes_project 2 171848804 171849874 - Gm11466 lincRNA lincRNA MGP_LPJ_T0013587.1 MGP_LPJ_G0011678.1 mouse_genomes_project 2 80997893 80998578 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013435.1 MGP_LPJ_G0011526.1 mouse_genomes_project 2 23868446 23869083 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013771.1 MGP_LPJ_G0011862.1 mouse_genomes_project 2 153843341 153845060 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055657.1 MGP_LPJ_G0025940.1 mouse_genomes_project 2 88271223 88272272 + MGP_LPJ_P0055657 protein_coding protein_coding MGP_LPJ_T0059530.1 MGP_LPJ_G0026920.1 mouse_genomes_project 2 186668011 186683286 + MGP_LPJ_P0059530 Adrm1 protein_coding protein_coding MGP_LPJ_T0059531.1 MGP_LPJ_G0026920.1 mouse_genomes_project 2 186668121 186668965 + Adrm1 protein_coding retained_intron MGP_LPJ_T0059532.1 MGP_LPJ_G0026920.1 mouse_genomes_project 2 186668132 186683284 + Adrm1 protein_coding retained_intron MGP_LPJ_T0059533.1 MGP_LPJ_G0026920.1 mouse_genomes_project 2 186668132 186669908 + Adrm1 protein_coding retained_intron MGP_LPJ_T0059534.1 MGP_LPJ_G0026920.1 mouse_genomes_project 2 186668140 186677423 + Adrm1 protein_coding retained_intron MGP_LPJ_T0059535.1 MGP_LPJ_G0026920.1 mouse_genomes_project 2 186668185 186683286 + Adrm1 protein_coding processed_transcript MGP_LPJ_T0059536.1 MGP_LPJ_G0026920.1 mouse_genomes_project 2 186668679 186683284 + Adrm1 protein_coding retained_intron MGP_LPJ_T0059537.1 MGP_LPJ_G0026920.1 mouse_genomes_project 2 186676597 186683282 + Adrm1 protein_coding retained_intron MGP_LPJ_T0011502.1 MGP_LPJ_G0009620.1 mouse_genomes_project 2 10621293 10621480 + Gm27540 misc_RNA misc_RNA MGP_LPJ_T0057362.1 MGP_LPJ_G0026397.1 mouse_genomes_project 2 130945409 130956290 + MGP_LPJ_P0057362 Gpat2 protein_coding protein_coding MGP_LPJ_T0057197.1 MGP_LPJ_G0026359.1 mouse_genomes_project 2 127466005 127520015 + Sema6d protein_coding retained_intron MGP_LPJ_T0057198.1 MGP_LPJ_G0026359.1 mouse_genomes_project 2 127466005 128059333 + MGP_LPJ_P0057198 Sema6d protein_coding protein_coding MGP_LPJ_T0057199.1 MGP_LPJ_G0026359.1 mouse_genomes_project 2 127519666 127895493 + Sema6d protein_coding processed_transcript MGP_LPJ_T0057200.1 MGP_LPJ_G0026359.1 mouse_genomes_project 2 128001009 128053699 + Sema6d protein_coding retained_intron MGP_LPJ_T0057201.1 MGP_LPJ_G0026359.1 mouse_genomes_project 2 128001199 128056763 + MGP_LPJ_P0057201 Sema6d protein_coding protein_coding MGP_LPJ_T0057202.1 MGP_LPJ_G0026359.1 mouse_genomes_project 2 128001199 128058027 + MGP_LPJ_P0057202 Sema6d protein_coding protein_coding MGP_LPJ_T0057203.1 MGP_LPJ_G0026359.1 mouse_genomes_project 2 128001199 128058027 + MGP_LPJ_P0057203 Sema6d protein_coding protein_coding MGP_LPJ_T0057204.1 MGP_LPJ_G0026359.1 mouse_genomes_project 2 128001199 128058027 + MGP_LPJ_P0057204 Sema6d protein_coding protein_coding MGP_LPJ_T0057205.1 MGP_LPJ_G0026359.1 mouse_genomes_project 2 128001476 128058024 + MGP_LPJ_P0057205 Sema6d protein_coding protein_coding MGP_LPJ_T0057206.1 MGP_LPJ_G0026359.1 mouse_genomes_project 2 128001504 128056763 + MGP_LPJ_P0057206 Sema6d protein_coding protein_coding MGP_LPJ_T0057207.1 MGP_LPJ_G0026359.1 mouse_genomes_project 2 128044446 128056127 + MGP_LPJ_P0057207 Sema6d protein_coding protein_coding MGP_LPJ_T0007214.1 MGP_LPJ_G0005918.1 mouse_genomes_project 2 50605596 50623510 - 1700057H21Rik lincRNA lincRNA MGP_LPJ_T0007215.1 MGP_LPJ_G0005918.1 mouse_genomes_project 2 50605662 50622625 - 1700057H21Rik lincRNA lincRNA MGP_LPJ_T0013769.1 MGP_LPJ_G0011860.1 mouse_genomes_project 2 152519893 152520387 - processed_pseudogene processed_pseudogene MGP_LPJ_T0059199.1 MGP_LPJ_G0026838.1 mouse_genomes_project 2 172619137 172660902 + Cse1l protein_coding processed_transcript MGP_LPJ_T0059200.1 MGP_LPJ_G0026838.1 mouse_genomes_project 2 172619156 172664640 + MGP_LPJ_P0059200 Cse1l protein_coding protein_coding MGP_LPJ_T0059201.1 MGP_LPJ_G0026838.1 mouse_genomes_project 2 172619208 172664352 + MGP_LPJ_P0059201 Cse1l protein_coding nonsense_mediated_decay MGP_LPJ_T0059202.1 MGP_LPJ_G0026838.1 mouse_genomes_project 2 172630488 172662150 + MGP_LPJ_P0059202 Cse1l protein_coding protein_coding MGP_LPJ_T0059203.1 MGP_LPJ_G0026838.1 mouse_genomes_project 2 172643812 172662165 + MGP_LPJ_P0059203 Cse1l protein_coding protein_coding MGP_LPJ_T0059204.1 MGP_LPJ_G0026838.1 mouse_genomes_project 2 172643847 172648668 + Cse1l protein_coding retained_intron MGP_LPJ_T0059205.1 MGP_LPJ_G0026838.1 mouse_genomes_project 2 172644006 172651351 + Cse1l protein_coding retained_intron MGP_LPJ_T0059206.1 MGP_LPJ_G0026838.1 mouse_genomes_project 2 172644050 172653690 + Cse1l protein_coding processed_transcript MGP_LPJ_T0059207.1 MGP_LPJ_G0026838.1 mouse_genomes_project 2 172651018 172661205 + Cse1l protein_coding retained_intron MGP_LPJ_T0059208.1 MGP_LPJ_G0026838.1 mouse_genomes_project 2 172651045 172657727 + MGP_LPJ_P0059208 Cse1l protein_coding nonsense_mediated_decay MGP_LPJ_T0059209.1 MGP_LPJ_G0026838.1 mouse_genomes_project 2 172653361 172657523 + Cse1l protein_coding retained_intron MGP_LPJ_T0059210.1 MGP_LPJ_G0026838.1 mouse_genomes_project 2 172657105 172658091 + Cse1l protein_coding retained_intron MGP_LPJ_T0054377.1 MGP_LPJ_G0025627.1 mouse_genomes_project 2 36029395 36082186 + MGP_LPJ_P0054377 Rabgap1 protein_coding protein_coding MGP_LPJ_T0054378.1 MGP_LPJ_G0025627.1 mouse_genomes_project 2 36029401 36155360 + MGP_LPJ_P0054378 Rabgap1 protein_coding protein_coding MGP_LPJ_T0054379.1 MGP_LPJ_G0025627.1 mouse_genomes_project 2 36029412 36074948 + Rabgap1 protein_coding retained_intron MGP_LPJ_T0054380.1 MGP_LPJ_G0025627.1 mouse_genomes_project 2 36037749 36039902 + Rabgap1 protein_coding processed_transcript MGP_LPJ_T0054381.1 MGP_LPJ_G0025627.1 mouse_genomes_project 2 36038358 36062150 + MGP_LPJ_P0054381 Rabgap1 protein_coding protein_coding MGP_LPJ_T0054382.1 MGP_LPJ_G0025627.1 mouse_genomes_project 2 36038358 36134154 + MGP_LPJ_P0054382 Rabgap1 protein_coding protein_coding MGP_LPJ_T0054383.1 MGP_LPJ_G0025627.1 mouse_genomes_project 2 36038380 36155377 + MGP_LPJ_P0054383 Rabgap1 protein_coding protein_coding MGP_LPJ_T0054385.1 MGP_LPJ_G0025627.1 mouse_genomes_project 2 36077466 36080543 + Rabgap1 protein_coding retained_intron MGP_LPJ_T0054386.1 MGP_LPJ_G0025627.1 mouse_genomes_project 2 36078527 36097460 + Rabgap1 protein_coding processed_transcript MGP_LPJ_T0054388.1 MGP_LPJ_G0025627.1 mouse_genomes_project 2 36105678 36153976 + Rabgap1 protein_coding processed_transcript MGP_LPJ_T0056576.1 MGP_LPJ_G0026233.1 mouse_genomes_project 2 116524610 116539389 - MGP_LPJ_P0056576 Grem1 protein_coding protein_coding MGP_LPJ_T0057100.1 MGP_LPJ_G0026334.1 mouse_genomes_project 2 124684396 124727857 + MGP_LPJ_P0057100 Wdr76 protein_coding protein_coding MGP_LPJ_T0057101.1 MGP_LPJ_G0026334.1 mouse_genomes_project 2 124684428 124716299 + Wdr76 protein_coding retained_intron MGP_LPJ_T0057102.1 MGP_LPJ_G0026334.1 mouse_genomes_project 2 124684445 124715721 + MGP_LPJ_P0057102 Wdr76 protein_coding protein_coding MGP_LPJ_T0057103.1 MGP_LPJ_G0026334.1 mouse_genomes_project 2 124684456 124729332 + MGP_LPJ_P0057103 Wdr76 protein_coding protein_coding MGP_LPJ_T0057104.1 MGP_LPJ_G0026334.1 mouse_genomes_project 2 124687547 124727462 + MGP_LPJ_P0057104 Wdr76 protein_coding protein_coding MGP_LPJ_T0013464.1 MGP_LPJ_G0011555.1 mouse_genomes_project 2 37124691 37124826 + processed_pseudogene processed_pseudogene MGP_LPJ_T0052201.1 MGP_LPJ_G0025242.1 mouse_genomes_project 2 603104 789744 + MGP_LPJ_P0052201 Fam107b protein_coding protein_coding MGP_LPJ_T0052202.1 MGP_LPJ_G0025242.1 mouse_genomes_project 2 710838 792076 + MGP_LPJ_P0052202 Fam107b protein_coding protein_coding MGP_LPJ_T0052203.1 MGP_LPJ_G0025242.1 mouse_genomes_project 2 710858 789878 + MGP_LPJ_P0052203 Fam107b protein_coding nonsense_mediated_decay MGP_LPJ_T0052204.1 MGP_LPJ_G0025242.1 mouse_genomes_project 2 778209 780473 + MGP_LPJ_P0052204 Fam107b protein_coding protein_coding MGP_LPJ_T0052205.1 MGP_LPJ_G0025242.1 mouse_genomes_project 2 778235 792074 + MGP_LPJ_P0052205 Fam107b protein_coding protein_coding MGP_LPJ_T0052206.1 MGP_LPJ_G0025242.1 mouse_genomes_project 2 781447 789582 + MGP_LPJ_P0052206 Fam107b protein_coding protein_coding MGP_LPJ_T0055804.1 MGP_LPJ_G0026056.1 mouse_genomes_project 2 91363549 91368211 + MGP_LPJ_P0055804 Olfr1262 protein_coding protein_coding MGP_LPJ_T0055805.1 MGP_LPJ_G0026056.1 mouse_genomes_project 2 91363574 91368015 + MGP_LPJ_P0055805 Olfr1262 protein_coding protein_coding MGP_LPJ_T0055806.1 MGP_LPJ_G0026056.1 mouse_genomes_project 2 91365811 91368211 + MGP_LPJ_P0055806 Olfr1262 protein_coding protein_coding MGP_LPJ_T0004191.1 MGP_LPJ_G0003704.1 mouse_genomes_project 2 176398134 176400114 + Bcas1os1 antisense antisense MGP_LPJ_T0100589.1 MGP_LPJ_G0038852.1 mouse_genomes_project 2 60760632 60760764 + Gm26422 snoRNA snoRNA MGP_LPJ_T0007433.1 MGP_LPJ_G0006097.1 mouse_genomes_project 2 176047701 176057233 - A630075F10Rik lincRNA lincRNA MGP_LPJ_T0055654.1 MGP_LPJ_G0025937.1 mouse_genomes_project 2 88157338 88158277 - MGP_LPJ_P0055654 Olfr1111 protein_coding protein_coding MGP_LPJ_T0007381.1 MGP_LPJ_G0006053.1 mouse_genomes_project 2 161461508 161464074 - Gm14225 lincRNA lincRNA MGP_LPJ_T0102059.1 MGP_LPJ_G0040096.1 mouse_genomes_project 2 91855544 91888041 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0057440.1 MGP_LPJ_G0026418.1 mouse_genomes_project 2 132556570 132625204 + MGP_LPJ_P0057440 Zc3h6 protein_coding protein_coding MGP_LPJ_T0057441.1 MGP_LPJ_G0026418.1 mouse_genomes_project 2 132556577 132584047 + MGP_LPJ_P0057441 Zc3h6 protein_coding protein_coding MGP_LPJ_T0054286.1 MGP_LPJ_G0025587.1 mouse_genomes_project 2 34127205 34308540 + MGP_LPJ_P0054286 Dab2ip protein_coding protein_coding MGP_LPJ_T0054287.1 MGP_LPJ_G0025587.1 mouse_genomes_project 2 34151769 34308538 + MGP_LPJ_P0054287 Dab2ip protein_coding protein_coding MGP_LPJ_T0054288.1 MGP_LPJ_G0025587.1 mouse_genomes_project 2 34190885 34308538 + MGP_LPJ_P0054288 Dab2ip protein_coding nonsense_mediated_decay MGP_LPJ_T0054289.1 MGP_LPJ_G0025587.1 mouse_genomes_project 2 34191064 34308542 + MGP_LPJ_P0054289 Dab2ip protein_coding protein_coding MGP_LPJ_T0054290.1 MGP_LPJ_G0025587.1 mouse_genomes_project 2 34191064 34308538 + MGP_LPJ_P0054290 Dab2ip protein_coding protein_coding MGP_LPJ_T0054291.1 MGP_LPJ_G0025587.1 mouse_genomes_project 2 34232497 34286421 + Dab2ip protein_coding retained_intron MGP_LPJ_T0054292.1 MGP_LPJ_G0025587.1 mouse_genomes_project 2 34237497 34308540 + MGP_LPJ_P0054292 Dab2ip protein_coding nonsense_mediated_decay MGP_LPJ_T0054293.1 MGP_LPJ_G0025587.1 mouse_genomes_project 2 34237575 34287507 + Dab2ip protein_coding processed_transcript MGP_LPJ_T0054294.1 MGP_LPJ_G0025587.1 mouse_genomes_project 2 34269571 34308538 + MGP_LPJ_P0054294 Dab2ip protein_coding protein_coding MGP_LPJ_T0054295.1 MGP_LPJ_G0025587.1 mouse_genomes_project 2 34269910 34306495 + MGP_LPJ_P0054295 Dab2ip protein_coding protein_coding MGP_LPJ_T0054296.1 MGP_LPJ_G0025587.1 mouse_genomes_project 2 34287900 34308540 + MGP_LPJ_P0054296 Dab2ip protein_coding protein_coding MGP_LPJ_T0052355.1 MGP_LPJ_G0025267.1 mouse_genomes_project 2 7284343 7310233 - MGP_LPJ_P0052355 Atp5c1 protein_coding protein_coding MGP_LPJ_T0052356.1 MGP_LPJ_G0025267.1 mouse_genomes_project 2 7284353 7310286 - MGP_LPJ_P0052356 Atp5c1 protein_coding protein_coding MGP_LPJ_T0052357.1 MGP_LPJ_G0025267.1 mouse_genomes_project 2 7284357 7310250 - MGP_LPJ_P0052357 Atp5c1 protein_coding protein_coding MGP_LPJ_T0052358.1 MGP_LPJ_G0025267.1 mouse_genomes_project 2 7293149 7309665 - MGP_LPJ_P0052358 Atp5c1 protein_coding protein_coding MGP_LPJ_T0052359.1 MGP_LPJ_G0025267.1 mouse_genomes_project 2 7293293 7309982 - MGP_LPJ_P0052359 Atp5c1 protein_coding protein_coding MGP_LPJ_T0052360.1 MGP_LPJ_G0025267.1 mouse_genomes_project 2 7293971 7309861 - MGP_LPJ_P0052360 Atp5c1 protein_coding protein_coding MGP_LPJ_T0057618.1 MGP_LPJ_G0026460.1 mouse_genomes_project 2 134874862 134875581 + MGP_LPJ_P0057618 Gm11037 protein_coding protein_coding MGP_LPJ_T0007187.1 MGP_LPJ_G0005896.1 mouse_genomes_project 2 32164557 32167133 - 9430024E24Rik lincRNA lincRNA MGP_LPJ_T0056128.1 MGP_LPJ_G0026113.1 mouse_genomes_project 2 94893611 95036455 - MGP_LPJ_P0056128 Tspan18 protein_coding protein_coding MGP_LPJ_T0056129.1 MGP_LPJ_G0026113.1 mouse_genomes_project 2 94896094 94920745 - MGP_LPJ_P0056129 Tspan18 protein_coding protein_coding MGP_LPJ_T0056130.1 MGP_LPJ_G0026113.1 mouse_genomes_project 2 95012176 95036473 - Tspan18 protein_coding processed_transcript MGP_LPJ_T0056131.1 MGP_LPJ_G0026113.1 mouse_genomes_project 2 95012176 95013429 - Tspan18 protein_coding processed_transcript MGP_LPJ_T0052921.1 MGP_LPJ_G0025363.1 mouse_genomes_project 2 23066289 23067143 + MGP_LPJ_P0052921 Tmem203 protein_coding protein_coding MGP_LPJ_T0010418.1 MGP_LPJ_G0008536.1 mouse_genomes_project 2 30340788 30340851 + Mir7674 miRNA miRNA MGP_LPJ_T0055706.1 MGP_LPJ_G0025979.1 mouse_genomes_project 2 89154640 89155582 - MGP_LPJ_P0055706 Olfr73 protein_coding protein_coding MGP_LPJ_T0013432.1 MGP_LPJ_G0011523.1 mouse_genomes_project 2 22438185 22438831 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007177.1 MGP_LPJ_G0005889.1 mouse_genomes_project 2 26068282 26100695 + F730016J06Rik lincRNA lincRNA MGP_LPJ_T0007178.1 MGP_LPJ_G0005889.1 mouse_genomes_project 2 26068288 26086849 + F730016J06Rik lincRNA lincRNA MGP_LPJ_T0007179.1 MGP_LPJ_G0005889.1 mouse_genomes_project 2 26091204 26098185 + F730016J06Rik lincRNA lincRNA MGP_LPJ_T0007418.1 MGP_LPJ_G0006084.1 mouse_genomes_project 2 173655671 173659630 + Gm14319 lincRNA lincRNA MGP_LPJ_T0054335.1 MGP_LPJ_G0025600.1 mouse_genomes_project 2 35161821 35162751 + MGP_LPJ_P0054335 Olfr344 protein_coding protein_coding MGP_LPJ_T0010459.1 MGP_LPJ_G0008577.1 mouse_genomes_project 2 95994304 95994404 - Mir670 miRNA miRNA MGP_LPJ_T0013674.1 MGP_LPJ_G0011765.1 mouse_genomes_project 2 111043484 111044415 + processed_pseudogene processed_pseudogene MGP_LPJ_T0053617.1 MGP_LPJ_G0025488.1 mouse_genomes_project 2 28300568 28305545 - D2Wsu81e protein_coding retained_intron MGP_LPJ_T0053618.1 MGP_LPJ_G0025488.1 mouse_genomes_project 2 28300568 28305558 - D2Wsu81e protein_coding retained_intron MGP_LPJ_T0053619.1 MGP_LPJ_G0025488.1 mouse_genomes_project 2 28300583 28304621 - D2Wsu81e protein_coding retained_intron MGP_LPJ_T0053620.1 MGP_LPJ_G0025488.1 mouse_genomes_project 2 28300586 28305100 - D2Wsu81e protein_coding retained_intron MGP_LPJ_T0053621.1 MGP_LPJ_G0025488.1 mouse_genomes_project 2 28300586 28305566 - MGP_LPJ_P0053621 D2Wsu81e protein_coding protein_coding MGP_LPJ_T0053622.1 MGP_LPJ_G0025488.1 mouse_genomes_project 2 28300588 28305575 - D2Wsu81e protein_coding retained_intron MGP_LPJ_T0053623.1 MGP_LPJ_G0025488.1 mouse_genomes_project 2 28302046 28305081 - D2Wsu81e protein_coding processed_transcript MGP_LPJ_T0053624.1 MGP_LPJ_G0025488.1 mouse_genomes_project 2 28303478 28305571 - D2Wsu81e protein_coding retained_intron MGP_LPJ_T0001071.1 MGP_LPJ_G0000996.1 mouse_genomes_project 2 10510084 10512344 - TEC TEC MGP_LPJ_T0057078.1 MGP_LPJ_G0026328.1 mouse_genomes_project 2 124588424 124593694 - MGP_LPJ_P0057078 Ell3 protein_coding protein_coding MGP_LPJ_T0057079.1 MGP_LPJ_G0026328.1 mouse_genomes_project 2 124588441 124592017 - MGP_LPJ_P0057079 Ell3 protein_coding protein_coding MGP_LPJ_T0057081.1 MGP_LPJ_G0026328.1 mouse_genomes_project 2 124589394 124590567 - Ell3 protein_coding retained_intron MGP_LPJ_T0010507.1 MGP_LPJ_G0008625.1 mouse_genomes_project 2 180523486 180523565 - Mir296 miRNA miRNA MGP_LPJ_T0100562.1 MGP_LPJ_G0038825.1 mouse_genomes_project 2 17521688 17521779 + Gm25859 snoRNA snoRNA MGP_LPJ_T0058367.1 MGP_LPJ_G0026662.1 mouse_genomes_project 2 159691559 159773845 + MGP_LPJ_P0058367 Raly protein_coding protein_coding MGP_LPJ_T0058368.1 MGP_LPJ_G0026662.1 mouse_genomes_project 2 159691569 159770350 + MGP_LPJ_P0058368 Raly protein_coding protein_coding MGP_LPJ_T0058369.1 MGP_LPJ_G0026662.1 mouse_genomes_project 2 159691573 159773861 + MGP_LPJ_P0058369 Raly protein_coding protein_coding MGP_LPJ_T0058370.1 MGP_LPJ_G0026662.1 mouse_genomes_project 2 159691581 159768450 + MGP_LPJ_P0058370 Raly protein_coding protein_coding MGP_LPJ_T0058371.1 MGP_LPJ_G0026662.1 mouse_genomes_project 2 159691596 159773844 + MGP_LPJ_P0058371 Raly protein_coding protein_coding MGP_LPJ_T0058372.1 MGP_LPJ_G0026662.1 mouse_genomes_project 2 159691620 159773861 + MGP_LPJ_P0058372 Raly protein_coding protein_coding MGP_LPJ_T0058373.1 MGP_LPJ_G0026662.1 mouse_genomes_project 2 159691815 159770563 + MGP_LPJ_P0058373 Raly protein_coding protein_coding MGP_LPJ_T0058374.1 MGP_LPJ_G0026662.1 mouse_genomes_project 2 159691817 159754979 + Raly protein_coding processed_transcript MGP_LPJ_T0058375.1 MGP_LPJ_G0026662.1 mouse_genomes_project 2 159691832 159763854 + Raly protein_coding processed_transcript MGP_LPJ_T0058377.1 MGP_LPJ_G0026662.1 mouse_genomes_project 2 159692176 159763967 + Raly protein_coding processed_transcript MGP_LPJ_T0013468.1 MGP_LPJ_G0011559.1 mouse_genomes_project 2 37900109 37900472 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007206.1 MGP_LPJ_G0005910.1 mouse_genomes_project 2 44659942 44664685 - Gm13467 lincRNA lincRNA MGP_LPJ_T0013385.1 MGP_LPJ_G0011476.1 mouse_genomes_project 2 6433839 6434269 - processed_pseudogene processed_pseudogene MGP_LPJ_T0056777.1 MGP_LPJ_G0026284.1 mouse_genomes_project 2 122741426 122749747 - MGP_LPJ_P0056777 Ndufaf1 protein_coding protein_coding MGP_LPJ_T0056778.1 MGP_LPJ_G0026284.1 mouse_genomes_project 2 122747307 122749721 - Ndufaf1 protein_coding processed_transcript MGP_LPJ_T0056779.1 MGP_LPJ_G0026284.1 mouse_genomes_project 2 122747487 122749736 - Ndufaf1 protein_coding processed_transcript MGP_LPJ_T0058517.1 MGP_LPJ_G0026689.1 mouse_genomes_project 2 161007184 161017296 + MGP_LPJ_P0058517 Ergic3 protein_coding protein_coding MGP_LPJ_T0058518.1 MGP_LPJ_G0026689.1 mouse_genomes_project 2 161007245 161017296 + MGP_LPJ_P0058518 Ergic3 protein_coding protein_coding MGP_LPJ_T0058519.1 MGP_LPJ_G0026689.1 mouse_genomes_project 2 161007362 161010362 + Ergic3 protein_coding retained_intron MGP_LPJ_T0058520.1 MGP_LPJ_G0026689.1 mouse_genomes_project 2 161007758 161016655 + MGP_LPJ_P0058520 Ergic3 protein_coding protein_coding MGP_LPJ_T0058521.1 MGP_LPJ_G0026689.1 mouse_genomes_project 2 161009577 161017104 + MGP_LPJ_P0058521 Ergic3 protein_coding protein_coding MGP_LPJ_T0058522.1 MGP_LPJ_G0026689.1 mouse_genomes_project 2 161015525 161017167 + Ergic3 protein_coding processed_transcript MGP_LPJ_T0058523.1 MGP_LPJ_G0026689.1 mouse_genomes_project 2 161016231 161017113 + Ergic3 protein_coding processed_transcript MGP_LPJ_T0058524.1 MGP_LPJ_G0026689.1 mouse_genomes_project 2 161016510 161017296 + Ergic3 protein_coding retained_intron MGP_LPJ_T0058525.1 MGP_LPJ_G0026689.1 mouse_genomes_project 2 161016562 161017296 + Ergic3 protein_coding retained_intron MGP_LPJ_T0058526.1 MGP_LPJ_G0026689.1 mouse_genomes_project 2 161016664 161017294 + Ergic3 protein_coding retained_intron MGP_LPJ_T0003907.1 MGP_LPJ_G0003496.1 mouse_genomes_project 2 4011038 4013641 + Gm13389 antisense antisense MGP_LPJ_T0054767.1 MGP_LPJ_G0025692.1 mouse_genomes_project 2 59726527 59819695 - MGP_LPJ_P0054767 Ly75 protein_coding protein_coding MGP_LPJ_T0054768.1 MGP_LPJ_G0025692.1 mouse_genomes_project 2 59728184 59819623 - MGP_LPJ_P0054768 Ly75 protein_coding protein_coding MGP_LPJ_T0013830.1 MGP_LPJ_G0011921.1 mouse_genomes_project 2 176456647 176456999 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100624.1 MGP_LPJ_G0038887.1 mouse_genomes_project 2 153101689 153101801 + Gm25866 snoRNA snoRNA MGP_LPJ_T0001111.1 MGP_LPJ_G0001036.1 mouse_genomes_project 2 68676029 68679648 + TEC TEC MGP_LPJ_T0052659.1 MGP_LPJ_G0025317.1 mouse_genomes_project 2 18475183 18597074 - MGP_LPJ_P0052659 Arhgap21 protein_coding protein_coding MGP_LPJ_T0052660.1 MGP_LPJ_G0025317.1 mouse_genomes_project 2 18475183 18595914 - MGP_LPJ_P0052660 Arhgap21 protein_coding protein_coding MGP_LPJ_T0052661.1 MGP_LPJ_G0025317.1 mouse_genomes_project 2 18475204 18595913 - MGP_LPJ_P0052661 Arhgap21 protein_coding protein_coding MGP_LPJ_T0052662.1 MGP_LPJ_G0025317.1 mouse_genomes_project 2 18475858 18596719 - MGP_LPJ_P0052662 Arhgap21 protein_coding protein_coding MGP_LPJ_T0052663.1 MGP_LPJ_G0025317.1 mouse_genomes_project 2 18477216 18480512 - Arhgap21 protein_coding retained_intron MGP_LPJ_T0052664.1 MGP_LPJ_G0025317.1 mouse_genomes_project 2 18477307 18510585 - MGP_LPJ_P0052664 Arhgap21 protein_coding nonsense_mediated_decay MGP_LPJ_T0052665.1 MGP_LPJ_G0025317.1 mouse_genomes_project 2 18477508 18487153 - Arhgap21 protein_coding retained_intron MGP_LPJ_T0052666.1 MGP_LPJ_G0025317.1 mouse_genomes_project 2 18477644 18481896 - Arhgap21 protein_coding retained_intron MGP_LPJ_T0052667.1 MGP_LPJ_G0025317.1 mouse_genomes_project 2 18480305 18482970 - Arhgap21 protein_coding processed_transcript MGP_LPJ_T0052668.1 MGP_LPJ_G0025317.1 mouse_genomes_project 2 18480306 18487146 - Arhgap21 protein_coding processed_transcript MGP_LPJ_T0052669.1 MGP_LPJ_G0025317.1 mouse_genomes_project 2 18486179 18498984 - MGP_LPJ_P0052669 Arhgap21 protein_coding protein_coding MGP_LPJ_T0052670.1 MGP_LPJ_G0025317.1 mouse_genomes_project 2 18486693 18488367 - Arhgap21 protein_coding retained_intron MGP_LPJ_T0052671.1 MGP_LPJ_G0025317.1 mouse_genomes_project 2 18513713 18542909 - Arhgap21 protein_coding processed_transcript MGP_LPJ_T0052672.1 MGP_LPJ_G0025317.1 mouse_genomes_project 2 18517255 18571584 - MGP_LPJ_P0052672 Arhgap21 protein_coding protein_coding MGP_LPJ_T0052673.1 MGP_LPJ_G0025317.1 mouse_genomes_project 2 18543014 18596818 - MGP_LPJ_P0052673 Arhgap21 protein_coding protein_coding MGP_LPJ_T0052674.1 MGP_LPJ_G0025317.1 mouse_genomes_project 2 18595790 18596677 - Arhgap21 protein_coding processed_transcript MGP_LPJ_T0052675.1 MGP_LPJ_G0025317.1 mouse_genomes_project 2 18595815 18597025 - Arhgap21 protein_coding processed_transcript MGP_LPJ_T0052676.1 MGP_LPJ_G0025317.1 mouse_genomes_project 2 18595882 18597073 - Arhgap21 protein_coding processed_transcript MGP_LPJ_T0013516.1 MGP_LPJ_G0011607.1 mouse_genomes_project 2 56590201 56590390 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013614.1 MGP_LPJ_G0011705.1 mouse_genomes_project 2 88388155 88388351 + processed_pseudogene processed_pseudogene MGP_LPJ_T0053875.1 MGP_LPJ_G0025526.1 mouse_genomes_project 2 30339897 30382230 - MGP_LPJ_P0053875 Fam78a protein_coding nonsense_mediated_decay MGP_LPJ_T0053878.1 MGP_LPJ_G0025526.1 mouse_genomes_project 2 30361501 30381344 - MGP_LPJ_P0053878 Fam78a protein_coding protein_coding MGP_LPJ_T0053879.1 MGP_LPJ_G0025526.1 mouse_genomes_project 2 30364054 30376913 - Fam78a protein_coding processed_transcript MGP_LPJ_T0053880.1 MGP_LPJ_G0025526.1 mouse_genomes_project 2 30380832 30382418 - Fam78a protein_coding processed_transcript MGP_LPJ_T0007377.1 MGP_LPJ_G0006050.1 mouse_genomes_project 2 157424562 157426521 - Gm26841 lincRNA lincRNA MGP_LPJ_T0058113.1 MGP_LPJ_G0026581.1 mouse_genomes_project 2 156380361 156406658 - MGP_LPJ_P0058113 Psmf1 protein_coding protein_coding MGP_LPJ_T0058114.1 MGP_LPJ_G0026581.1 mouse_genomes_project 2 156380611 156385559 - Psmf1 protein_coding retained_intron MGP_LPJ_T0058115.1 MGP_LPJ_G0026581.1 mouse_genomes_project 2 156380611 156406641 - MGP_LPJ_P0058115 Psmf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0058116.1 MGP_LPJ_G0026581.1 mouse_genomes_project 2 156382814 156409534 - MGP_LPJ_P0058116 Psmf1 protein_coding protein_coding MGP_LPJ_T0058117.1 MGP_LPJ_G0026581.1 mouse_genomes_project 2 156384034 156394474 - Psmf1 protein_coding retained_intron MGP_LPJ_T0058118.1 MGP_LPJ_G0026581.1 mouse_genomes_project 2 156392045 156406641 - Psmf1 protein_coding retained_intron MGP_LPJ_T0057240.1 MGP_LPJ_G0026371.1 mouse_genomes_project 2 129168791 129216009 - MGP_LPJ_P0057240 Secisbp2l protein_coding protein_coding MGP_LPJ_T0057241.1 MGP_LPJ_G0026371.1 mouse_genomes_project 2 129176446 129191986 - MGP_LPJ_P0057241 Secisbp2l protein_coding protein_coding MGP_LPJ_T0057242.1 MGP_LPJ_G0026371.1 mouse_genomes_project 2 129182052 129183938 - Secisbp2l protein_coding retained_intron MGP_LPJ_T0017737.1 MGP_LPJ_G0015347.1 mouse_genomes_project 2 75923854 75929110 + E030042O20Rik processed_transcript processed_transcript MGP_LPJ_T0100606.1 MGP_LPJ_G0038869.1 mouse_genomes_project 2 110528815 110528946 - Gm23749 snoRNA snoRNA MGP_LPJ_T0010368.1 MGP_LPJ_G0008486.1 mouse_genomes_project 2 7748282 7748409 + Gm26398 miRNA miRNA MGP_LPJ_T0054970.1 MGP_LPJ_G0025729.1 mouse_genomes_project 2 69036697 69145365 - MGP_LPJ_P0054970 Abcb11 protein_coding protein_coding MGP_LPJ_T0054971.1 MGP_LPJ_G0025729.1 mouse_genomes_project 2 69036704 69145367 - MGP_LPJ_P0054971 Abcb11 protein_coding protein_coding MGP_LPJ_T0054972.1 MGP_LPJ_G0025729.1 mouse_genomes_project 2 69036704 69145351 - MGP_LPJ_P0054972 Abcb11 protein_coding protein_coding MGP_LPJ_T0054973.1 MGP_LPJ_G0025729.1 mouse_genomes_project 2 69036725 69037494 - Abcb11 protein_coding processed_transcript MGP_LPJ_T0013407.1 MGP_LPJ_G0011498.1 mouse_genomes_project 2 15538603 15538868 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007210.1 MGP_LPJ_G0005914.1 mouse_genomes_project 2 49695737 49700082 + Gm13485 lincRNA lincRNA MGP_LPJ_T0007162.1 MGP_LPJ_G0005878.1 mouse_genomes_project 2 18740600 18764085 + Gm13376 lincRNA lincRNA MGP_LPJ_T0055244.1 MGP_LPJ_G0025783.1 mouse_genomes_project 2 74890132 74926499 + MGP_LPJ_P0055244 Hoxd3 protein_coding protein_coding MGP_LPJ_T0055249.1 MGP_LPJ_G0025783.1 mouse_genomes_project 2 74911061 74922442 + MGP_LPJ_P0055249 Hoxd3 protein_coding protein_coding MGP_LPJ_T0055250.1 MGP_LPJ_G0025783.1 mouse_genomes_project 2 74914607 74926143 + MGP_LPJ_P0055250 Hoxd3 protein_coding protein_coding MGP_LPJ_T0055251.1 MGP_LPJ_G0025783.1 mouse_genomes_project 2 74917710 74926128 + MGP_LPJ_P0055251 Hoxd3 protein_coding protein_coding MGP_LPJ_T0055252.1 MGP_LPJ_G0025783.1 mouse_genomes_project 2 74923901 74924824 + MGP_LPJ_P0055252 Hoxd3 protein_coding protein_coding MGP_LPJ_T0055253.1 MGP_LPJ_G0025783.1 mouse_genomes_project 2 74923949 74926670 + Hoxd3 protein_coding retained_intron MGP_LPJ_T0017799.1 MGP_LPJ_G0015379.1 mouse_genomes_project 2 125987285 126003212 + 4930417H01Rik processed_transcript processed_transcript MGP_LPJ_T0017800.1 MGP_LPJ_G0015379.1 mouse_genomes_project 2 125988145 126005688 + 4930417H01Rik processed_transcript processed_transcript MGP_LPJ_T0017801.1 MGP_LPJ_G0015379.1 mouse_genomes_project 2 125988147 126003212 + 4930417H01Rik processed_transcript processed_transcript MGP_LPJ_T0017802.1 MGP_LPJ_G0015379.1 mouse_genomes_project 2 125989489 126005689 + 4930417H01Rik processed_transcript processed_transcript MGP_LPJ_T0017803.1 MGP_LPJ_G0015379.1 mouse_genomes_project 2 125989491 126003323 + 4930417H01Rik processed_transcript processed_transcript MGP_LPJ_T0017804.1 MGP_LPJ_G0015379.1 mouse_genomes_project 2 125993296 126006548 + 4930417H01Rik processed_transcript processed_transcript MGP_LPJ_T0052694.1 MGP_LPJ_G0025323.1 mouse_genomes_project 2 20443366 20507937 + Apbb1ip protein_coding processed_transcript MGP_LPJ_T0052695.1 MGP_LPJ_G0025323.1 mouse_genomes_project 2 20443366 20547809 + MGP_LPJ_P0052695 Apbb1ip protein_coding protein_coding MGP_LPJ_T0052696.1 MGP_LPJ_G0025323.1 mouse_genomes_project 2 20443662 20524178 + Apbb1ip protein_coding processed_transcript MGP_LPJ_T0052697.1 MGP_LPJ_G0025323.1 mouse_genomes_project 2 20443717 20500365 + Apbb1ip protein_coding retained_intron MGP_LPJ_T0013403.1 MGP_LPJ_G0011494.1 mouse_genomes_project 2 13430971 13431584 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003948.1 MGP_LPJ_G0003527.1 mouse_genomes_project 2 26579082 26593206 + Gm13381 antisense antisense MGP_LPJ_T0003949.1 MGP_LPJ_G0003527.1 mouse_genomes_project 2 26579413 26593488 + Gm13381 antisense antisense MGP_LPJ_T0102027.1 MGP_LPJ_G0040064.1 mouse_genomes_project 2 86213452 86214178 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0003952.1 MGP_LPJ_G0003530.1 mouse_genomes_project 2 28363144 28364574 - 1700084E18Rik antisense antisense MGP_LPJ_T0003953.1 MGP_LPJ_G0003530.1 mouse_genomes_project 2 28363842 28364574 - 1700084E18Rik antisense pseudogene MGP_LPJ_T0058605.1 MGP_LPJ_G0026698.1 mouse_genomes_project 2 161198543 161255235 + MGP_LPJ_P0058605 Phf20 protein_coding protein_coding MGP_LPJ_T0058606.1 MGP_LPJ_G0026698.1 mouse_genomes_project 2 161198719 161313711 + MGP_LPJ_P0058606 Phf20 protein_coding protein_coding MGP_LPJ_T0058607.1 MGP_LPJ_G0026698.1 mouse_genomes_project 2 161198811 161313709 + Phf20 protein_coding processed_transcript MGP_LPJ_T0058608.1 MGP_LPJ_G0026698.1 mouse_genomes_project 2 161198831 161226174 + Phf20 protein_coding retained_intron MGP_LPJ_T0058609.1 MGP_LPJ_G0026698.1 mouse_genomes_project 2 161198833 161255437 + Phf20 protein_coding retained_intron MGP_LPJ_T0058610.1 MGP_LPJ_G0026698.1 mouse_genomes_project 2 161225139 161252762 + Phf20 protein_coding processed_transcript MGP_LPJ_T0058611.1 MGP_LPJ_G0026698.1 mouse_genomes_project 2 161265195 161275540 + Phf20 protein_coding processed_transcript MGP_LPJ_T0058612.1 MGP_LPJ_G0026698.1 mouse_genomes_project 2 161285741 161295576 + Phf20 protein_coding processed_transcript MGP_LPJ_T0058613.1 MGP_LPJ_G0026698.1 mouse_genomes_project 2 161296796 161301655 + Phf20 protein_coding retained_intron MGP_LPJ_T0058614.1 MGP_LPJ_G0026698.1 mouse_genomes_project 2 161299080 161301747 + Phf20 protein_coding processed_transcript MGP_LPJ_T0058615.1 MGP_LPJ_G0026698.1 mouse_genomes_project 2 161299456 161307560 + Phf20 protein_coding processed_transcript MGP_LPJ_T0055718.1 MGP_LPJ_G0025990.1 mouse_genomes_project 2 89675617 89676402 - MGP_LPJ_P0055718 protein_coding protein_coding MGP_LPJ_T0099368.1 MGP_LPJ_G0037631.1 mouse_genomes_project 2 170151541 170151648 + Gm25512 snRNA snRNA MGP_LPJ_T0057145.1 MGP_LPJ_G0026345.1 mouse_genomes_project 2 125428503 125448106 + MGP_LPJ_P0057145 Terb2 protein_coding protein_coding MGP_LPJ_T0057146.1 MGP_LPJ_G0026345.1 mouse_genomes_project 2 125428705 125446672 + Terb2 protein_coding processed_transcript MGP_LPJ_T0101309.1 MGP_LPJ_G0039529.1 mouse_genomes_project 2 114635864 114636989 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0054144.1 MGP_LPJ_G0025566.1 mouse_genomes_project 2 31996005 32082373 - MGP_LPJ_P0054144 Lmx1b protein_coding protein_coding MGP_LPJ_T0054145.1 MGP_LPJ_G0025566.1 mouse_genomes_project 2 31996316 32082491 - MGP_LPJ_P0054145 Lmx1b protein_coding protein_coding MGP_LPJ_T0054146.1 MGP_LPJ_G0025566.1 mouse_genomes_project 2 31998868 32074235 - Lmx1b protein_coding processed_transcript MGP_LPJ_T0054277.1 MGP_LPJ_G0025586.1 mouse_genomes_project 2 33957127 33990369 - MGP_LPJ_P0054277 Ggta1 protein_coding protein_coding MGP_LPJ_T0054278.1 MGP_LPJ_G0025586.1 mouse_genomes_project 2 33957127 34032115 - MGP_LPJ_P0054278 Ggta1 protein_coding protein_coding MGP_LPJ_T0054279.1 MGP_LPJ_G0025586.1 mouse_genomes_project 2 33957131 34032298 - MGP_LPJ_P0054279 Ggta1 protein_coding protein_coding MGP_LPJ_T0054280.1 MGP_LPJ_G0025586.1 mouse_genomes_project 2 33957131 34032098 - MGP_LPJ_P0054280 Ggta1 protein_coding protein_coding MGP_LPJ_T0054281.1 MGP_LPJ_G0025586.1 mouse_genomes_project 2 33959057 33980260 - MGP_LPJ_P0054281 Ggta1 protein_coding protein_coding MGP_LPJ_T0054282.1 MGP_LPJ_G0025586.1 mouse_genomes_project 2 33959057 33980260 - MGP_LPJ_P0054282 Ggta1 protein_coding protein_coding MGP_LPJ_T0054283.1 MGP_LPJ_G0025586.1 mouse_genomes_project 2 33964893 34000322 - MGP_LPJ_P0054283 Ggta1 protein_coding protein_coding MGP_LPJ_T0054284.1 MGP_LPJ_G0025586.1 mouse_genomes_project 2 33980261 34003983 - Ggta1 protein_coding processed_transcript MGP_LPJ_T0054285.1 MGP_LPJ_G0025586.1 mouse_genomes_project 2 33990249 34033922 - Ggta1 protein_coding processed_transcript MGP_LPJ_T0010455.1 MGP_LPJ_G0008573.1 mouse_genomes_project 2 95126741 95126820 - Mir7001 miRNA miRNA MGP_LPJ_T0053176.1 MGP_LPJ_G0025414.1 mouse_genomes_project 2 24242858 24246829 - Dnlz protein_coding processed_transcript MGP_LPJ_T0053177.1 MGP_LPJ_G0025414.1 mouse_genomes_project 2 24242858 24246839 - MGP_LPJ_P0053177 Dnlz protein_coding protein_coding MGP_LPJ_T0059026.1 MGP_LPJ_G0026807.1 mouse_genomes_project 2 170332857 170335438 - MGP_LPJ_P0059026 Tnnc2 protein_coding protein_coding MGP_LPJ_T0059027.1 MGP_LPJ_G0026807.1 mouse_genomes_project 2 170333640 170335664 - Tnnc2 protein_coding processed_transcript MGP_LPJ_T0007334.1 MGP_LPJ_G0006015.1 mouse_genomes_project 2 128697582 128698874 - Gm14003 lincRNA lincRNA MGP_LPJ_T0052177.1 MGP_LPJ_G0025238.1 mouse_genomes_project 2 397640 436008 + MGP_LPJ_P0052177 Dclre1c protein_coding protein_coding MGP_LPJ_T0052178.1 MGP_LPJ_G0025238.1 mouse_genomes_project 2 397640 439071 + MGP_LPJ_P0052178 Dclre1c protein_coding protein_coding MGP_LPJ_T0052179.1 MGP_LPJ_G0025238.1 mouse_genomes_project 2 397659 412008 + Dclre1c protein_coding processed_transcript MGP_LPJ_T0052180.1 MGP_LPJ_G0025238.1 mouse_genomes_project 2 397659 428952 + MGP_LPJ_P0052180 Dclre1c protein_coding protein_coding MGP_LPJ_T0052181.1 MGP_LPJ_G0025238.1 mouse_genomes_project 2 397674 412046 + Dclre1c protein_coding processed_transcript MGP_LPJ_T0052182.1 MGP_LPJ_G0025238.1 mouse_genomes_project 2 397674 436000 + MGP_LPJ_P0052182 Dclre1c protein_coding protein_coding MGP_LPJ_T0052183.1 MGP_LPJ_G0025238.1 mouse_genomes_project 2 397711 417117 + Dclre1c protein_coding retained_intron MGP_LPJ_T0052184.1 MGP_LPJ_G0025238.1 mouse_genomes_project 2 415739 433818 + MGP_LPJ_P0052184 Dclre1c protein_coding protein_coding MGP_LPJ_T0052185.1 MGP_LPJ_G0025238.1 mouse_genomes_project 2 427808 428727 + Dclre1c protein_coding processed_transcript MGP_LPJ_T0056708.1 MGP_LPJ_G0026264.1 mouse_genomes_project 2 122059802 122071848 - MGP_LPJ_P0056708 Ccdc32 protein_coding protein_coding MGP_LPJ_T0056709.1 MGP_LPJ_G0026264.1 mouse_genomes_project 2 122063739 122071848 - MGP_LPJ_P0056709 Ccdc32 protein_coding protein_coding MGP_LPJ_T0056710.1 MGP_LPJ_G0026264.1 mouse_genomes_project 2 122063810 122071832 - MGP_LPJ_P0056710 Ccdc32 protein_coding protein_coding MGP_LPJ_T0013505.1 MGP_LPJ_G0011596.1 mouse_genomes_project 2 51862996 51863428 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011539.1 MGP_LPJ_G0009657.1 mouse_genomes_project 2 180543034 180543098 + Gm27899 misc_RNA misc_RNA MGP_LPJ_T0057655.1 MGP_LPJ_G0026468.1 mouse_genomes_project 2 135048553 135104257 - MGP_LPJ_P0057655 Rnf24 protein_coding protein_coding MGP_LPJ_T0057656.1 MGP_LPJ_G0026468.1 mouse_genomes_project 2 135048554 135064830 - MGP_LPJ_P0057656 Rnf24 protein_coding protein_coding MGP_LPJ_T0057657.1 MGP_LPJ_G0026468.1 mouse_genomes_project 2 135048556 135080373 - MGP_LPJ_P0057657 Rnf24 protein_coding protein_coding MGP_LPJ_T0057658.1 MGP_LPJ_G0026468.1 mouse_genomes_project 2 135054491 135104238 - MGP_LPJ_P0057658 Rnf24 protein_coding nonsense_mediated_decay MGP_LPJ_T0057659.1 MGP_LPJ_G0026468.1 mouse_genomes_project 2 135064072 135104268 - Rnf24 protein_coding retained_intron MGP_LPJ_T0053033.1 MGP_LPJ_G0025381.1 mouse_genomes_project 2 23321635 23324702 - MGP_LPJ_P0053033 Lcn12 protein_coding protein_coding MGP_LPJ_T0053034.1 MGP_LPJ_G0025381.1 mouse_genomes_project 2 23321637 23324223 - MGP_LPJ_P0053034 Lcn12 protein_coding protein_coding MGP_LPJ_T0013825.1 MGP_LPJ_G0011916.1 mouse_genomes_project 2 173027504 173027863 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007416.1 MGP_LPJ_G0006082.1 mouse_genomes_project 2 173569272 173570708 + 9230111E07Rik lincRNA lincRNA MGP_LPJ_T0053759.1 MGP_LPJ_G0025508.1 mouse_genomes_project 2 29156759 29162816 + MGP_LPJ_P0053759 Tor1b protein_coding protein_coding MGP_LPJ_T0053760.1 MGP_LPJ_G0025508.1 mouse_genomes_project 2 29156779 29162812 + Tor1b protein_coding retained_intron MGP_LPJ_T0053761.1 MGP_LPJ_G0025508.1 mouse_genomes_project 2 29156791 29160295 + MGP_LPJ_P0053761 Tor1b protein_coding nonsense_mediated_decay MGP_LPJ_T0053762.1 MGP_LPJ_G0025508.1 mouse_genomes_project 2 29156972 29160786 + Tor1b protein_coding retained_intron MGP_LPJ_T0053763.1 MGP_LPJ_G0025508.1 mouse_genomes_project 2 29156987 29162813 + MGP_LPJ_P0053763 Tor1b protein_coding nonsense_mediated_decay MGP_LPJ_T0053764.1 MGP_LPJ_G0025508.1 mouse_genomes_project 2 29157552 29160674 + MGP_LPJ_P0053764 Tor1b protein_coding nonsense_mediated_decay MGP_LPJ_T0053765.1 MGP_LPJ_G0025508.1 mouse_genomes_project 2 29159053 29160913 + Tor1b protein_coding processed_transcript MGP_LPJ_T0100645.1 MGP_LPJ_G0038908.1 mouse_genomes_project 2 172788182 172788271 + Gm23201 snoRNA snoRNA MGP_LPJ_T0007294.1 MGP_LPJ_G0005983.1 mouse_genomes_project 2 105492996 105504290 - BC016548 lincRNA lincRNA MGP_LPJ_T0007295.1 MGP_LPJ_G0005983.1 mouse_genomes_project 2 105499242 105504288 - BC016548 lincRNA lincRNA MGP_LPJ_T0056637.1 MGP_LPJ_G0026247.1 mouse_genomes_project 2 121107892 121123110 + MGP_LPJ_P0056637 Thbs1 protein_coding protein_coding MGP_LPJ_T0056638.1 MGP_LPJ_G0026247.1 mouse_genomes_project 2 121118919 121119744 + Thbs1 protein_coding processed_transcript MGP_LPJ_T0059008.1 MGP_LPJ_G0026798.1 mouse_genomes_project 2 170202088 170209043 - MGP_LPJ_P0059008 Wfdc9 protein_coding protein_coding MGP_LPJ_T0059009.1 MGP_LPJ_G0026798.1 mouse_genomes_project 2 170202244 170204222 - MGP_LPJ_P0059009 Wfdc9 protein_coding protein_coding MGP_LPJ_T0058134.1 MGP_LPJ_G0026589.1 mouse_genomes_project 2 156926549 156978611 + MGP_LPJ_P0058134 Csnk2a1 protein_coding unknown_likely_coding MGP_LPJ_T0058135.1 MGP_LPJ_G0026589.1 mouse_genomes_project 2 156926606 156978608 + MGP_LPJ_P0058135 Csnk2a1 protein_coding protein_coding MGP_LPJ_T0058136.1 MGP_LPJ_G0026589.1 mouse_genomes_project 2 156926643 156969377 + Csnk2a1 protein_coding retained_intron MGP_LPJ_T0058137.1 MGP_LPJ_G0026589.1 mouse_genomes_project 2 156926663 156961378 + MGP_LPJ_P0058137 Csnk2a1 protein_coding protein_coding MGP_LPJ_T0058138.1 MGP_LPJ_G0026589.1 mouse_genomes_project 2 156926675 156957945 + MGP_LPJ_P0058138 Csnk2a1 protein_coding protein_coding MGP_LPJ_T0058139.1 MGP_LPJ_G0026589.1 mouse_genomes_project 2 156926680 156953617 + Csnk2a1 protein_coding retained_intron MGP_LPJ_T0052636.1 MGP_LPJ_G0025314.1 mouse_genomes_project 2 17022424 17122739 - MGP_LPJ_P0052636 4921504E06Rik protein_coding protein_coding MGP_LPJ_T0052637.1 MGP_LPJ_G0025314.1 mouse_genomes_project 2 17058460 17122739 - 4921504E06Rik protein_coding retained_intron MGP_LPJ_T0007285.1 MGP_LPJ_G0005976.1 mouse_genomes_project 2 97612939 97615445 + Gm13799 lincRNA lincRNA MGP_LPJ_T0058952.1 MGP_LPJ_G0026775.1 mouse_genomes_project 2 169695017 169696285 - MGP_LPJ_P0058952 Wfdc15a protein_coding protein_coding MGP_LPJ_T0056678.1 MGP_LPJ_G0026257.1 mouse_genomes_project 2 121786158 121794656 - MGP_LPJ_P0056678 protein_coding protein_coding MGP_LPJ_T0056679.1 MGP_LPJ_G0026257.1 mouse_genomes_project 2 121789492 121794620 - protein_coding retained_intron MGP_LPJ_T0003958.1 MGP_LPJ_G0003535.1 mouse_genomes_project 2 29924776 29936825 - Gm13427 antisense antisense MGP_LPJ_T0056055.1 MGP_LPJ_G0026101.1 mouse_genomes_project 2 93570316 93618652 - MGP_LPJ_P0056055 Creb3l1 protein_coding protein_coding MGP_LPJ_T0007444.1 MGP_LPJ_G0006107.1 mouse_genomes_project 2 181136441 181148704 - Gm14618 lincRNA lincRNA MGP_LPJ_T0013579.1 MGP_LPJ_G0011670.1 mouse_genomes_project 2 79025922 79026420 + processed_pseudogene processed_pseudogene MGP_LPJ_T0054823.1 MGP_LPJ_G0025700.1 mouse_genomes_project 2 61840271 61927542 - MGP_LPJ_P0054823 Dpp4 protein_coding protein_coding MGP_LPJ_T0054824.1 MGP_LPJ_G0025700.1 mouse_genomes_project 2 61844658 61856690 - Dpp4 protein_coding retained_intron MGP_LPJ_T0054825.1 MGP_LPJ_G0025700.1 mouse_genomes_project 2 61865187 61870640 - Dpp4 protein_coding processed_transcript MGP_LPJ_T0054826.1 MGP_LPJ_G0025700.1 mouse_genomes_project 2 61878270 61892579 - Dpp4 protein_coding retained_intron MGP_LPJ_T0054827.1 MGP_LPJ_G0025700.1 mouse_genomes_project 2 61887809 61927332 - Dpp4 protein_coding retained_intron MGP_LPJ_T0054828.1 MGP_LPJ_G0025700.1 mouse_genomes_project 2 61923026 61927170 - Dpp4 protein_coding processed_transcript MGP_LPJ_T0059817.1 MGP_LPJ_G0026970.1 mouse_genomes_project 2 188487062 188508920 + MGP_LPJ_P0059817 Pcmtd2 protein_coding protein_coding MGP_LPJ_T0059818.1 MGP_LPJ_G0026970.1 mouse_genomes_project 2 188487121 188508905 + MGP_LPJ_P0059818 Pcmtd2 protein_coding protein_coding MGP_LPJ_T0059819.1 MGP_LPJ_G0026970.1 mouse_genomes_project 2 188491541 188497349 + MGP_LPJ_P0059819 Pcmtd2 protein_coding protein_coding MGP_LPJ_T0059820.1 MGP_LPJ_G0026970.1 mouse_genomes_project 2 188493162 188497403 + Pcmtd2 protein_coding retained_intron MGP_LPJ_T0059821.1 MGP_LPJ_G0026970.1 mouse_genomes_project 2 188495191 188506797 + MGP_LPJ_P0059821 Pcmtd2 protein_coding protein_coding MGP_LPJ_T0059822.1 MGP_LPJ_G0026970.1 mouse_genomes_project 2 188502416 188507061 + Pcmtd2 protein_coding processed_transcript MGP_LPJ_T0059823.1 MGP_LPJ_G0026970.1 mouse_genomes_project 2 188502424 188506936 + Pcmtd2 protein_coding processed_transcript MGP_LPJ_T0059824.1 MGP_LPJ_G0026970.1 mouse_genomes_project 2 188502458 188506714 + Pcmtd2 protein_coding processed_transcript MGP_LPJ_T0059825.1 MGP_LPJ_G0026970.1 mouse_genomes_project 2 188503021 188506964 + Pcmtd2 protein_coding retained_intron MGP_LPJ_T0055770.1 MGP_LPJ_G0026035.1 mouse_genomes_project 2 90704669 90705617 - MGP_LPJ_P0055770 Olfr1238 protein_coding protein_coding MGP_LPJ_T0053009.1 MGP_LPJ_G0025378.1 mouse_genomes_project 2 23284922 23290734 - BC029214 protein_coding processed_transcript MGP_LPJ_T0053010.1 MGP_LPJ_G0025378.1 mouse_genomes_project 2 23284922 23289982 - BC029214 protein_coding processed_transcript MGP_LPJ_T0053017.1 MGP_LPJ_G0025378.1 mouse_genomes_project 2 23289231 23290099 - BC029214 protein_coding processed_transcript MGP_LPJ_T0053018.1 MGP_LPJ_G0025378.1 mouse_genomes_project 2 23289263 23290876 - MGP_LPJ_P0053018 BC029214 protein_coding protein_coding MGP_LPJ_T0053019.1 MGP_LPJ_G0025378.1 mouse_genomes_project 2 23289265 23290854 - BC029214 protein_coding processed_transcript MGP_LPJ_T0053020.1 MGP_LPJ_G0025378.1 mouse_genomes_project 2 23289266 23290061 - BC029214 protein_coding processed_transcript MGP_LPJ_T0053021.1 MGP_LPJ_G0025378.1 mouse_genomes_project 2 23289266 23290446 - BC029214 protein_coding processed_transcript MGP_LPJ_T0053022.1 MGP_LPJ_G0025378.1 mouse_genomes_project 2 23289312 23290790 - BC029214 protein_coding processed_transcript MGP_LPJ_T0053023.1 MGP_LPJ_G0025378.1 mouse_genomes_project 2 23289342 23290747 - BC029214 protein_coding processed_transcript MGP_LPJ_T0053024.1 MGP_LPJ_G0025378.1 mouse_genomes_project 2 23289596 23290813 - MGP_LPJ_P0053024 BC029214 protein_coding protein_coding MGP_LPJ_T0053025.1 MGP_LPJ_G0025378.1 mouse_genomes_project 2 23289793 23290805 - BC029214 protein_coding processed_transcript MGP_LPJ_T0053026.1 MGP_LPJ_G0025378.1 mouse_genomes_project 2 23289809 23290709 - BC029214 protein_coding processed_transcript MGP_LPJ_T0053027.1 MGP_LPJ_G0025378.1 mouse_genomes_project 2 23290040 23290730 - BC029214 protein_coding processed_transcript MGP_LPJ_T0102072.1 MGP_LPJ_G0040109.1 mouse_genomes_project 2 157988464 157989132 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0055322.1 MGP_LPJ_G0025803.1 mouse_genomes_project 2 77310710 77477475 - MGP_LPJ_P0055322 Ccdc141 protein_coding protein_coding MGP_LPJ_T0055323.1 MGP_LPJ_G0025803.1 mouse_genomes_project 2 77310803 77477457 - MGP_LPJ_P0055323 Ccdc141 protein_coding protein_coding MGP_LPJ_T0055324.1 MGP_LPJ_G0025803.1 mouse_genomes_project 2 77312355 77320789 - MGP_LPJ_P0055324 Ccdc141 protein_coding protein_coding MGP_LPJ_T0055325.1 MGP_LPJ_G0025803.1 mouse_genomes_project 2 77315847 77323568 - Ccdc141 protein_coding processed_transcript MGP_LPJ_T0055326.1 MGP_LPJ_G0025803.1 mouse_genomes_project 2 77324258 77331522 - Ccdc141 protein_coding retained_intron MGP_LPJ_T0055327.1 MGP_LPJ_G0025803.1 mouse_genomes_project 2 77331519 77346744 - Ccdc141 protein_coding retained_intron MGP_LPJ_T0055328.1 MGP_LPJ_G0025803.1 mouse_genomes_project 2 77331519 77347394 - MGP_LPJ_P0055328 Ccdc141 protein_coding protein_coding MGP_LPJ_T0055329.1 MGP_LPJ_G0025803.1 mouse_genomes_project 2 77347634 77477476 - Ccdc141 protein_coding retained_intron MGP_LPJ_T0055330.1 MGP_LPJ_G0025803.1 mouse_genomes_project 2 77377322 77477450 - Ccdc141 protein_coding retained_intron MGP_LPJ_T0055331.1 MGP_LPJ_G0025803.1 mouse_genomes_project 2 77436810 77477440 - MGP_LPJ_P0055331 Ccdc141 protein_coding nonsense_mediated_decay MGP_LPJ_T0055332.1 MGP_LPJ_G0025803.1 mouse_genomes_project 2 77468820 77477416 - MGP_LPJ_P0055332 Ccdc141 protein_coding protein_coding MGP_LPJ_T0007412.1 MGP_LPJ_G0006080.1 mouse_genomes_project 2 173473793 173514195 + A530013C23Rik lincRNA lincRNA MGP_LPJ_T0007413.1 MGP_LPJ_G0006080.1 mouse_genomes_project 2 173473797 173480411 + A530013C23Rik lincRNA lincRNA MGP_LPJ_T0059304.1 MGP_LPJ_G0026859.1 mouse_genomes_project 2 174065473 174067434 + MGP_LPJ_P0059304 Mocs3 protein_coding protein_coding MGP_LPJ_T0013475.1 MGP_LPJ_G0011566.1 mouse_genomes_project 2 38882598 38883980 + processed_pseudogene processed_pseudogene MGP_LPJ_T0053881.1 MGP_LPJ_G0025527.1 mouse_genomes_project 2 30394685 30410256 + MGP_LPJ_P0053881 Plpp7 protein_coding protein_coding MGP_LPJ_T0053882.1 MGP_LPJ_G0025527.1 mouse_genomes_project 2 30394722 30409562 + MGP_LPJ_P0053882 Plpp7 protein_coding protein_coding MGP_LPJ_T0053883.1 MGP_LPJ_G0025527.1 mouse_genomes_project 2 30395312 30410244 + MGP_LPJ_P0053883 Plpp7 protein_coding protein_coding MGP_LPJ_T0001070.1 MGP_LPJ_G0000995.1 mouse_genomes_project 2 10412629 10416586 + TEC TEC MGP_LPJ_T0098243.1 MGP_LPJ_G0036524.1 mouse_genomes_project 2 172349929 172350045 - Gm23152 rRNA rRNA MGP_LPJ_T0058133.1 MGP_LPJ_G0026588.1 mouse_genomes_project 2 156827013 156832549 + MGP_LPJ_P0058133 Tcf15 protein_coding protein_coding MGP_LPJ_T0055388.1 MGP_LPJ_G0025812.1 mouse_genomes_project 2 80106005 80216369 + MGP_LPJ_P0055388 Ppp1r1c protein_coding protein_coding MGP_LPJ_T0055389.1 MGP_LPJ_G0025812.1 mouse_genomes_project 2 80106147 80214606 + MGP_LPJ_P0055389 Ppp1r1c protein_coding protein_coding MGP_LPJ_T0055390.1 MGP_LPJ_G0025812.1 mouse_genomes_project 2 80106148 80221649 + MGP_LPJ_P0055390 Ppp1r1c protein_coding protein_coding MGP_LPJ_T0055391.1 MGP_LPJ_G0025812.1 mouse_genomes_project 2 80106287 80224552 + Ppp1r1c protein_coding processed_transcript MGP_LPJ_T0055392.1 MGP_LPJ_G0025812.1 mouse_genomes_project 2 80190227 80215362 + Ppp1r1c protein_coding processed_transcript MGP_LPJ_T0098239.1 MGP_LPJ_G0036520.1 mouse_genomes_project 2 125105000 125105114 - Gm23983 rRNA rRNA MGP_LPJ_T0100638.1 MGP_LPJ_G0038901.1 mouse_genomes_project 2 163543018 163543151 + Gm25129 snoRNA snoRNA MGP_LPJ_T0007218.1 MGP_LPJ_G0005921.1 mouse_genomes_project 2 54739266 54748775 + Gm14033 lincRNA lincRNA MGP_LPJ_T0007219.1 MGP_LPJ_G0005921.1 mouse_genomes_project 2 54739291 54760860 + Gm14033 lincRNA lincRNA MGP_LPJ_T0098374.1 MGP_LPJ_G0036655.1 mouse_genomes_project 2 109517455 109517725 - Gm24885 ribozyme ribozyme MGP_LPJ_T0057820.1 MGP_LPJ_G0026505.1 mouse_genomes_project 2 144228725 144230252 + MGP_LPJ_P0057820 Gm17374 protein_coding protein_coding MGP_LPJ_T0055262.1 MGP_LPJ_G0025790.1 mouse_genomes_project 2 76063971 76174265 + MGP_LPJ_P0055262 Agps protein_coding protein_coding MGP_LPJ_T0055263.1 MGP_LPJ_G0025790.1 mouse_genomes_project 2 76063983 76131459 + MGP_LPJ_P0055263 Agps protein_coding protein_coding MGP_LPJ_T0055264.1 MGP_LPJ_G0025790.1 mouse_genomes_project 2 76064299 76162297 + MGP_LPJ_P0055264 Agps protein_coding protein_coding MGP_LPJ_T0055265.1 MGP_LPJ_G0025790.1 mouse_genomes_project 2 76101318 76111537 + MGP_LPJ_P0055265 Agps protein_coding protein_coding MGP_LPJ_T0055266.1 MGP_LPJ_G0025790.1 mouse_genomes_project 2 76107816 76126986 + Agps protein_coding processed_transcript MGP_LPJ_T0055267.1 MGP_LPJ_G0025790.1 mouse_genomes_project 2 76129304 76162367 + MGP_LPJ_P0055267 Agps protein_coding nonsense_mediated_decay MGP_LPJ_T0055268.1 MGP_LPJ_G0025790.1 mouse_genomes_project 2 76145406 76147905 + Agps protein_coding retained_intron MGP_LPJ_T0057208.1 MGP_LPJ_G0026360.1 mouse_genomes_project 2 128472288 128492695 + MGP_LPJ_P0057208 Slc24a5 protein_coding protein_coding MGP_LPJ_T0057209.1 MGP_LPJ_G0026360.1 mouse_genomes_project 2 128473408 128487245 + Slc24a5 protein_coding processed_transcript MGP_LPJ_T0057210.1 MGP_LPJ_G0026360.1 mouse_genomes_project 2 128484521 128487098 + Slc24a5 protein_coding retained_intron MGP_LPJ_T0059650.1 MGP_LPJ_G0026943.1 mouse_genomes_project 2 187733797 187743223 - MGP_LPJ_P0059650 Eef1a2 protein_coding protein_coding MGP_LPJ_T0054927.1 MGP_LPJ_G0025718.1 mouse_genomes_project 2 67141247 67156903 + MGP_LPJ_P0054927 Gm21830 protein_coding protein_coding MGP_LPJ_T0007443.1 MGP_LPJ_G0006106.1 mouse_genomes_project 2 179601015 179602170 + Gm14642 lincRNA lincRNA MGP_LPJ_T0055676.1 MGP_LPJ_G0025951.1 mouse_genomes_project 2 88615900 88616813 + MGP_LPJ_P0055676 Olfr153 protein_coding protein_coding MGP_LPJ_T0056458.1 MGP_LPJ_G0026178.1 mouse_genomes_project 2 111782793 111845380 + MGP_LPJ_P0056458 Kif18a protein_coding protein_coding MGP_LPJ_T0056459.1 MGP_LPJ_G0026178.1 mouse_genomes_project 2 111782881 111798142 + Kif18a protein_coding retained_intron MGP_LPJ_T0056460.1 MGP_LPJ_G0026178.1 mouse_genomes_project 2 111782895 111810544 + Kif18a protein_coding retained_intron MGP_LPJ_T0056461.1 MGP_LPJ_G0026178.1 mouse_genomes_project 2 111782907 111813877 + Kif18a protein_coding retained_intron MGP_LPJ_T0056462.1 MGP_LPJ_G0026178.1 mouse_genomes_project 2 111782924 111797877 + Kif18a protein_coding retained_intron MGP_LPJ_T0056463.1 MGP_LPJ_G0026178.1 mouse_genomes_project 2 111794107 111798142 + Kif18a protein_coding retained_intron MGP_LPJ_T0055604.1 MGP_LPJ_G0025888.1 mouse_genomes_project 2 86800145 86801078 + MGP_LPJ_P0055604 Olfr1032 protein_coding protein_coding MGP_LPJ_T0058121.1 MGP_LPJ_G0026584.1 mouse_genomes_project 2 156647004 156657813 - MGP_LPJ_P0058121 Fam110a protein_coding protein_coding MGP_LPJ_T0058122.1 MGP_LPJ_G0026584.1 mouse_genomes_project 2 156647004 156651524 - MGP_LPJ_P0058122 Fam110a protein_coding protein_coding MGP_LPJ_T0058123.1 MGP_LPJ_G0026584.1 mouse_genomes_project 2 156647004 156651555 - MGP_LPJ_P0058123 Fam110a protein_coding protein_coding MGP_LPJ_T0058124.1 MGP_LPJ_G0026584.1 mouse_genomes_project 2 156647343 156651005 - MGP_LPJ_P0058124 Fam110a protein_coding protein_coding MGP_LPJ_T0001081.1 MGP_LPJ_G0001006.1 mouse_genomes_project 2 12172195 12174575 - TEC TEC MGP_LPJ_T0053989.1 MGP_LPJ_G0025539.1 mouse_genomes_project 2 30786531 30793028 + MGP_LPJ_P0053989 Naif1 protein_coding protein_coding MGP_LPJ_T0054646.1 MGP_LPJ_G0025669.1 mouse_genomes_project 2 52423612 52484378 - MGP_LPJ_P0054646 Prpf40a protein_coding protein_coding MGP_LPJ_T0054647.1 MGP_LPJ_G0025669.1 mouse_genomes_project 2 52429699 52435837 - Prpf40a protein_coding processed_transcript MGP_LPJ_T0054648.1 MGP_LPJ_G0025669.1 mouse_genomes_project 2 52443571 52484437 - MGP_LPJ_P0054648 Prpf40a protein_coding protein_coding MGP_LPJ_T0054649.1 MGP_LPJ_G0025669.1 mouse_genomes_project 2 52465630 52484357 - Prpf40a protein_coding processed_transcript MGP_LPJ_T0054650.1 MGP_LPJ_G0025669.1 mouse_genomes_project 2 52469320 52484378 - Prpf40a protein_coding processed_transcript MGP_LPJ_T0052502.1 MGP_LPJ_G0025287.1 mouse_genomes_project 2 10991031 10991938 + MGP_LPJ_P0052502 Vim protein_coding protein_coding MGP_LPJ_T0052503.1 MGP_LPJ_G0025287.1 mouse_genomes_project 2 10991056 10999920 + MGP_LPJ_P0052503 Vim protein_coding protein_coding MGP_LPJ_T0052504.1 MGP_LPJ_G0025287.1 mouse_genomes_project 2 10991385 10999919 + MGP_LPJ_P0052504 Vim protein_coding protein_coding MGP_LPJ_T0052505.1 MGP_LPJ_G0025287.1 mouse_genomes_project 2 10991426 10995709 + Vim protein_coding retained_intron MGP_LPJ_T0052506.1 MGP_LPJ_G0025287.1 mouse_genomes_project 2 10991627 10994553 + Vim protein_coding retained_intron MGP_LPJ_T0052507.1 MGP_LPJ_G0025287.1 mouse_genomes_project 2 10996467 10999572 + Vim protein_coding retained_intron MGP_LPJ_T0059001.1 MGP_LPJ_G0026793.1 mouse_genomes_project 2 170109626 170113496 - MGP_LPJ_P0059001 Spint3 protein_coding protein_coding MGP_LPJ_T0057797.1 MGP_LPJ_G0026497.1 mouse_genomes_project 2 140831881 140849363 - MGP_LPJ_P0057797 Mkks protein_coding protein_coding MGP_LPJ_T0057798.1 MGP_LPJ_G0026497.1 mouse_genomes_project 2 140831881 140849370 - MGP_LPJ_P0057798 Mkks protein_coding protein_coding MGP_LPJ_T0057799.1 MGP_LPJ_G0026497.1 mouse_genomes_project 2 140838741 140849135 - MGP_LPJ_P0057799 Mkks protein_coding protein_coding MGP_LPJ_T0017735.1 MGP_LPJ_G0015345.1 mouse_genomes_project 2 73535474 73570194 + D230022J07Rik processed_transcript processed_transcript MGP_LPJ_T0004075.1 MGP_LPJ_G0003617.1 mouse_genomes_project 2 116832878 116842944 + C130080G10Rik antisense antisense MGP_LPJ_T0004076.1 MGP_LPJ_G0003617.1 mouse_genomes_project 2 116832939 116842921 + C130080G10Rik antisense antisense MGP_LPJ_T0004077.1 MGP_LPJ_G0003617.1 mouse_genomes_project 2 116833790 116842423 + C130080G10Rik antisense antisense MGP_LPJ_T0004078.1 MGP_LPJ_G0003617.1 mouse_genomes_project 2 116834831 116842729 + C130080G10Rik antisense antisense MGP_LPJ_T0004079.1 MGP_LPJ_G0003617.1 mouse_genomes_project 2 116834856 116847638 + C130080G10Rik antisense antisense MGP_LPJ_T0055038.1 MGP_LPJ_G0025743.1 mouse_genomes_project 2 70363499 70366265 + MGP_LPJ_P0055038 Sp5 protein_coding protein_coding MGP_LPJ_T0058964.1 MGP_LPJ_G0026783.1 mouse_genomes_project 2 169869740 169872178 - MGP_LPJ_P0058964 Slpi protein_coding protein_coding MGP_LPJ_T0058965.1 MGP_LPJ_G0026783.1 mouse_genomes_project 2 169869832 169871738 - MGP_LPJ_P0058965 Slpi protein_coding protein_coding MGP_LPJ_T0058966.1 MGP_LPJ_G0026783.1 mouse_genomes_project 2 169871265 169912140 - MGP_LPJ_P0058966 Slpi protein_coding protein_coding MGP_LPJ_T0053384.1 MGP_LPJ_G0025450.1 mouse_genomes_project 2 26174166 26195474 + Olfm1 protein_coding processed_transcript MGP_LPJ_T0053385.1 MGP_LPJ_G0025450.1 mouse_genomes_project 2 26174166 26213567 + MGP_LPJ_P0053385 Olfm1 protein_coding protein_coding MGP_LPJ_T0053386.1 MGP_LPJ_G0025450.1 mouse_genomes_project 2 26174267 26213841 + MGP_LPJ_P0053386 Olfm1 protein_coding protein_coding MGP_LPJ_T0053387.1 MGP_LPJ_G0025450.1 mouse_genomes_project 2 26186811 26195474 + MGP_LPJ_P0053387 Olfm1 protein_coding protein_coding MGP_LPJ_T0053388.1 MGP_LPJ_G0025450.1 mouse_genomes_project 2 26186811 26213841 + MGP_LPJ_P0053388 Olfm1 protein_coding protein_coding MGP_LPJ_T0007427.1 MGP_LPJ_G0006092.1 mouse_genomes_project 2 175168196 175170950 + 9430093N23Rik lincRNA lincRNA MGP_LPJ_T0058174.1 MGP_LPJ_G0026607.1 mouse_genomes_project 2 157319696 157333430 + MGP_LPJ_P0058174 Defb36 protein_coding protein_coding MGP_LPJ_T0056078.1 MGP_LPJ_G0026103.1 mouse_genomes_project 2 93991774 93997784 - MGP_LPJ_P0056078 Gyltl1b protein_coding protein_coding MGP_LPJ_T0056079.1 MGP_LPJ_G0026103.1 mouse_genomes_project 2 93991774 93997713 - MGP_LPJ_P0056079 Gyltl1b protein_coding protein_coding MGP_LPJ_T0056080.1 MGP_LPJ_G0026103.1 mouse_genomes_project 2 93991775 93997763 - Gyltl1b protein_coding retained_intron MGP_LPJ_T0056081.1 MGP_LPJ_G0026103.1 mouse_genomes_project 2 93991779 93997745 - MGP_LPJ_P0056081 Gyltl1b protein_coding nonsense_mediated_decay MGP_LPJ_T0056082.1 MGP_LPJ_G0026103.1 mouse_genomes_project 2 93991780 93997738 - MGP_LPJ_P0056082 Gyltl1b protein_coding nonsense_mediated_decay MGP_LPJ_T0056083.1 MGP_LPJ_G0026103.1 mouse_genomes_project 2 93991788 93997755 - MGP_LPJ_P0056083 Gyltl1b protein_coding protein_coding MGP_LPJ_T0056084.1 MGP_LPJ_G0026103.1 mouse_genomes_project 2 93991788 93998694 - MGP_LPJ_P0056084 Gyltl1b protein_coding protein_coding MGP_LPJ_T0056085.1 MGP_LPJ_G0026103.1 mouse_genomes_project 2 93991799 93997760 - MGP_LPJ_P0056085 Gyltl1b protein_coding protein_coding MGP_LPJ_T0056086.1 MGP_LPJ_G0026103.1 mouse_genomes_project 2 93992520 93993250 - Gyltl1b protein_coding retained_intron MGP_LPJ_T0056087.1 MGP_LPJ_G0026103.1 mouse_genomes_project 2 93992703 93993505 - Gyltl1b protein_coding retained_intron MGP_LPJ_T0056088.1 MGP_LPJ_G0026103.1 mouse_genomes_project 2 93993746 93996203 - Gyltl1b protein_coding retained_intron MGP_LPJ_T0056089.1 MGP_LPJ_G0026103.1 mouse_genomes_project 2 93994042 93996390 - Gyltl1b protein_coding processed_transcript MGP_LPJ_T0056090.1 MGP_LPJ_G0026103.1 mouse_genomes_project 2 93994115 93996800 - Gyltl1b protein_coding retained_intron MGP_LPJ_T0056091.1 MGP_LPJ_G0026103.1 mouse_genomes_project 2 93994797 93997760 - Gyltl1b protein_coding retained_intron MGP_LPJ_T0056092.1 MGP_LPJ_G0026103.1 mouse_genomes_project 2 93996434 93997745 - Gyltl1b protein_coding retained_intron MGP_LPJ_T0056093.1 MGP_LPJ_G0026103.1 mouse_genomes_project 2 93996661 94001596 - MGP_LPJ_P0056093 Gyltl1b protein_coding protein_coding MGP_LPJ_T0056094.1 MGP_LPJ_G0026103.1 mouse_genomes_project 2 93996711 93998672 - Gyltl1b protein_coding retained_intron MGP_LPJ_T0010408.1 MGP_LPJ_G0008526.1 mouse_genomes_project 2 25329794 25329894 + Gm24049 miRNA miRNA MGP_LPJ_T0056602.1 MGP_LPJ_G0026242.1 mouse_genomes_project 2 118732424 118936765 - MGP_LPJ_P0056602 Meis2 protein_coding protein_coding MGP_LPJ_T0056603.1 MGP_LPJ_G0026242.1 mouse_genomes_project 2 118732424 118937563 - MGP_LPJ_P0056603 Meis2 protein_coding protein_coding MGP_LPJ_T0056604.1 MGP_LPJ_G0026242.1 mouse_genomes_project 2 118732424 118937563 - MGP_LPJ_P0056604 Meis2 protein_coding protein_coding MGP_LPJ_T0056605.1 MGP_LPJ_G0026242.1 mouse_genomes_project 2 118732424 118936765 - MGP_LPJ_P0056605 Meis2 protein_coding protein_coding MGP_LPJ_T0056606.1 MGP_LPJ_G0026242.1 mouse_genomes_project 2 118732505 118936439 - MGP_LPJ_P0056606 Meis2 protein_coding protein_coding MGP_LPJ_T0056607.1 MGP_LPJ_G0026242.1 mouse_genomes_project 2 118732661 118936223 - MGP_LPJ_P0056607 Meis2 protein_coding protein_coding MGP_LPJ_T0056608.1 MGP_LPJ_G0026242.1 mouse_genomes_project 2 118733266 118742313 - Meis2 protein_coding processed_transcript MGP_LPJ_T0056609.1 MGP_LPJ_G0026242.1 mouse_genomes_project 2 118733589 118738227 - Meis2 protein_coding retained_intron MGP_LPJ_T0056610.1 MGP_LPJ_G0026242.1 mouse_genomes_project 2 118733635 118913894 - Meis2 protein_coding processed_transcript MGP_LPJ_T0056611.1 MGP_LPJ_G0026242.1 mouse_genomes_project 2 118733680 118742224 - Meis2 protein_coding processed_transcript MGP_LPJ_T0056612.1 MGP_LPJ_G0026242.1 mouse_genomes_project 2 118733821 118742313 - Meis2 protein_coding processed_transcript MGP_LPJ_T0056613.1 MGP_LPJ_G0026242.1 mouse_genomes_project 2 118734229 118742332 - Meis2 protein_coding retained_intron MGP_LPJ_T0056614.1 MGP_LPJ_G0026242.1 mouse_genomes_project 2 118736235 118742316 - Meis2 protein_coding processed_transcript MGP_LPJ_T0056615.1 MGP_LPJ_G0026242.1 mouse_genomes_project 2 118791936 118921529 - Meis2 protein_coding processed_transcript MGP_LPJ_T0056616.1 MGP_LPJ_G0026242.1 mouse_genomes_project 2 118868345 118934230 - Meis2 protein_coding retained_intron MGP_LPJ_T0056617.1 MGP_LPJ_G0026242.1 mouse_genomes_project 2 118910623 118921061 - Meis2 protein_coding retained_intron MGP_LPJ_T0056618.1 MGP_LPJ_G0026242.1 mouse_genomes_project 2 118920932 118935290 - Meis2 protein_coding processed_transcript MGP_LPJ_T0056619.1 MGP_LPJ_G0026242.1 mouse_genomes_project 2 118920932 118934400 - Meis2 protein_coding processed_transcript MGP_LPJ_T0056620.1 MGP_LPJ_G0026242.1 mouse_genomes_project 2 118920955 118930699 - Meis2 protein_coding retained_intron MGP_LPJ_T0056272.1 MGP_LPJ_G0026140.1 mouse_genomes_project 2 105174722 105194739 + MGP_LPJ_P0056272 Apip protein_coding protein_coding MGP_LPJ_T0056273.1 MGP_LPJ_G0026140.1 mouse_genomes_project 2 105174742 105194726 + Apip protein_coding processed_transcript MGP_LPJ_T0056274.1 MGP_LPJ_G0026140.1 mouse_genomes_project 2 105184021 105193884 + Apip protein_coding processed_transcript MGP_LPJ_T0056275.1 MGP_LPJ_G0026140.1 mouse_genomes_project 2 105193929 105194733 + Apip protein_coding processed_transcript MGP_LPJ_T0054576.1 MGP_LPJ_G0025656.1 mouse_genomes_project 2 49199744 49331549 + MGP_LPJ_P0054576 Lypd6 protein_coding protein_coding MGP_LPJ_T0054577.1 MGP_LPJ_G0025656.1 mouse_genomes_project 2 49199777 49328650 + MGP_LPJ_P0054577 Lypd6 protein_coding protein_coding MGP_LPJ_T0054578.1 MGP_LPJ_G0025656.1 mouse_genomes_project 2 49199779 49331544 + MGP_LPJ_P0054578 Lypd6 protein_coding protein_coding MGP_LPJ_T0054579.1 MGP_LPJ_G0025656.1 mouse_genomes_project 2 49262953 49331543 + MGP_LPJ_P0054579 Lypd6 protein_coding protein_coding MGP_LPJ_T0054580.1 MGP_LPJ_G0025656.1 mouse_genomes_project 2 49302395 49310966 + MGP_LPJ_P0054580 Lypd6 protein_coding protein_coding MGP_LPJ_T0052677.1 MGP_LPJ_G0025318.1 mouse_genomes_project 2 18828842 18853889 - MGP_LPJ_P0052677 Enkur protein_coding protein_coding MGP_LPJ_T0052678.1 MGP_LPJ_G0025318.1 mouse_genomes_project 2 18841838 18853763 - Enkur protein_coding processed_transcript MGP_LPJ_T0052679.1 MGP_LPJ_G0025318.1 mouse_genomes_project 2 18845008 18853876 - Enkur protein_coding processed_transcript MGP_LPJ_T0013731.1 MGP_LPJ_G0011822.1 mouse_genomes_project 2 136838240 136839242 - processed_pseudogene processed_pseudogene MGP_LPJ_T0058005.1 MGP_LPJ_G0026551.1 mouse_genomes_project 2 153269361 153273290 + MGP_LPJ_P0058005 8030411F24Rik protein_coding protein_coding MGP_LPJ_T0052477.1 MGP_LPJ_G0025282.1 mouse_genomes_project 2 10289604 10373019 + MGP_LPJ_P0052477 Pter protein_coding protein_coding MGP_LPJ_T0052478.1 MGP_LPJ_G0025282.1 mouse_genomes_project 2 10289625 10351453 + Pter protein_coding processed_transcript MGP_LPJ_T0052479.1 MGP_LPJ_G0025282.1 mouse_genomes_project 2 10289632 10373020 + MGP_LPJ_P0052479 Pter protein_coding protein_coding MGP_LPJ_T0052480.1 MGP_LPJ_G0025282.1 mouse_genomes_project 2 10289655 10375494 + MGP_LPJ_P0052480 Pter protein_coding protein_coding MGP_LPJ_T0052481.1 MGP_LPJ_G0025282.1 mouse_genomes_project 2 10289663 10373653 + MGP_LPJ_P0052481 Pter protein_coding protein_coding MGP_LPJ_T0052482.1 MGP_LPJ_G0025282.1 mouse_genomes_project 2 10289664 10352895 + Pter protein_coding processed_transcript MGP_LPJ_T0052483.1 MGP_LPJ_G0025282.1 mouse_genomes_project 2 10348862 10373898 + Pter protein_coding retained_intron MGP_LPJ_T0001099.1 MGP_LPJ_G0001024.1 mouse_genomes_project 2 34862238 34864246 - TEC TEC MGP_LPJ_T0053268.1 MGP_LPJ_G0025427.1 mouse_genomes_project 2 24755649 24771988 - MGP_LPJ_P0053268 Abo protein_coding protein_coding MGP_LPJ_T0053269.1 MGP_LPJ_G0025427.1 mouse_genomes_project 2 24755649 24779935 - MGP_LPJ_P0053269 Abo protein_coding protein_coding MGP_LPJ_T0052306.1 MGP_LPJ_G0025260.1 mouse_genomes_project 2 3288047 3309919 - MGP_LPJ_P0052306 Echdc3 protein_coding protein_coding MGP_LPJ_T0052307.1 MGP_LPJ_G0025260.1 mouse_genomes_project 2 3289091 3295791 - Echdc3 protein_coding processed_transcript MGP_LPJ_T0052308.1 MGP_LPJ_G0025260.1 mouse_genomes_project 2 3302891 3309865 - Echdc3 protein_coding retained_intron MGP_LPJ_T0099327.1 MGP_LPJ_G0037590.1 mouse_genomes_project 2 37703743 37703850 + Gm26127 snRNA snRNA MGP_LPJ_T0001087.1 MGP_LPJ_G0001012.1 mouse_genomes_project 2 21210254 21211772 + TEC TEC MGP_LPJ_T0013624.1 MGP_LPJ_G0011715.1 mouse_genomes_project 2 91513418 91513888 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013649.1 MGP_LPJ_G0011740.1 mouse_genomes_project 2 103598602 103598813 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017813.1 MGP_LPJ_G0015382.1 mouse_genomes_project 2 132623592 132628416 + Gm14027 processed_transcript processed_transcript MGP_LPJ_T0058902.1 MGP_LPJ_G0026759.1 mouse_genomes_project 2 168974076 168984360 + MGP_LPJ_P0058902 R3hdml protein_coding protein_coding MGP_LPJ_T0054152.1 MGP_LPJ_G0025568.1 mouse_genomes_project 2 32649154 32861985 - MGP_LPJ_P0054152 Pbx3 protein_coding protein_coding MGP_LPJ_T0054153.1 MGP_LPJ_G0025568.1 mouse_genomes_project 2 32650569 32773910 - Pbx3 protein_coding processed_transcript MGP_LPJ_T0054154.1 MGP_LPJ_G0025568.1 mouse_genomes_project 2 32650577 32861985 - MGP_LPJ_P0054154 Pbx3 protein_coding nonsense_mediated_decay MGP_LPJ_T0054155.1 MGP_LPJ_G0025568.1 mouse_genomes_project 2 32650577 32861985 - MGP_LPJ_P0054155 Pbx3 protein_coding nonsense_mediated_decay MGP_LPJ_T0054156.1 MGP_LPJ_G0025568.1 mouse_genomes_project 2 32654555 32860911 - MGP_LPJ_P0054156 Pbx3 protein_coding nonsense_mediated_decay MGP_LPJ_T0054157.1 MGP_LPJ_G0025568.1 mouse_genomes_project 2 32696037 32864357 - MGP_LPJ_P0054157 Pbx3 protein_coding protein_coding MGP_LPJ_T0054158.1 MGP_LPJ_G0025568.1 mouse_genomes_project 2 32707186 32861318 - MGP_LPJ_P0054158 Pbx3 protein_coding protein_coding MGP_LPJ_T0054159.1 MGP_LPJ_G0025568.1 mouse_genomes_project 2 32707313 32861215 - MGP_LPJ_P0054159 Pbx3 protein_coding protein_coding MGP_LPJ_T0054160.1 MGP_LPJ_G0025568.1 mouse_genomes_project 2 32858176 32861857 - Pbx3 protein_coding retained_intron MGP_LPJ_T0054979.1 MGP_LPJ_G0025732.1 mouse_genomes_project 2 69476441 69498714 + MGP_LPJ_P0054979 Bbs5 protein_coding nonsense_mediated_decay MGP_LPJ_T0054980.1 MGP_LPJ_G0025732.1 mouse_genomes_project 2 69476478 69498967 + MGP_LPJ_P0054980 Bbs5 protein_coding protein_coding MGP_LPJ_T0054981.1 MGP_LPJ_G0025732.1 mouse_genomes_project 2 69476486 69498967 + MGP_LPJ_P0054981 Bbs5 protein_coding protein_coding MGP_LPJ_T0054982.1 MGP_LPJ_G0025732.1 mouse_genomes_project 2 69476500 69478844 + Bbs5 protein_coding retained_intron MGP_LPJ_T0054983.1 MGP_LPJ_G0025732.1 mouse_genomes_project 2 69476523 69483472 + Bbs5 protein_coding retained_intron MGP_LPJ_T0054984.1 MGP_LPJ_G0025732.1 mouse_genomes_project 2 69476533 69482314 + Bbs5 protein_coding retained_intron MGP_LPJ_T0054985.1 MGP_LPJ_G0025732.1 mouse_genomes_project 2 69484647 69496424 + Bbs5 protein_coding retained_intron MGP_LPJ_T0054986.1 MGP_LPJ_G0025732.1 mouse_genomes_project 2 69488066 69498967 + MGP_LPJ_P0054986 Bbs5 protein_coding protein_coding MGP_LPJ_T0010443.1 MGP_LPJ_G0008561.1 mouse_genomes_project 2 74904220 74904288 + Mir10b miRNA miRNA MGP_LPJ_T0055444.1 MGP_LPJ_G0025825.1 mouse_genomes_project 2 84326204 84400257 + MGP_LPJ_P0055444 Fam171b protein_coding protein_coding MGP_LPJ_T0055445.1 MGP_LPJ_G0025825.1 mouse_genomes_project 2 84373638 84376016 + Fam171b protein_coding processed_transcript MGP_LPJ_T0013466.1 MGP_LPJ_G0011557.1 mouse_genomes_project 2 37603621 37604224 + processed_pseudogene processed_pseudogene MGP_LPJ_T0055059.1 MGP_LPJ_G0025748.1 mouse_genomes_project 2 70620794 70738864 - Tlk1 protein_coding processed_transcript MGP_LPJ_T0055060.1 MGP_LPJ_G0025748.1 mouse_genomes_project 2 70620794 70739195 - MGP_LPJ_P0055060 Tlk1 protein_coding protein_coding MGP_LPJ_T0055061.1 MGP_LPJ_G0025748.1 mouse_genomes_project 2 70622528 70626612 - Tlk1 protein_coding processed_transcript MGP_LPJ_T0055062.1 MGP_LPJ_G0025748.1 mouse_genomes_project 2 70624699 70626292 - Tlk1 protein_coding processed_transcript MGP_LPJ_T0055063.1 MGP_LPJ_G0025748.1 mouse_genomes_project 2 70654372 70738790 - Tlk1 protein_coding processed_transcript MGP_LPJ_T0055064.1 MGP_LPJ_G0025748.1 mouse_genomes_project 2 70657606 70738778 - Tlk1 protein_coding processed_transcript MGP_LPJ_T0055065.1 MGP_LPJ_G0025748.1 mouse_genomes_project 2 70660710 70738695 - Tlk1 protein_coding processed_transcript MGP_LPJ_T0054538.1 MGP_LPJ_G0025651.1 mouse_genomes_project 2 47963584 48015104 - MGP_LPJ_P0054538 Orc4 protein_coding protein_coding MGP_LPJ_T0054539.1 MGP_LPJ_G0025651.1 mouse_genomes_project 2 47965640 47971221 - Orc4 protein_coding processed_transcript MGP_LPJ_T0054540.1 MGP_LPJ_G0025651.1 mouse_genomes_project 2 47966076 48015059 - Orc4 protein_coding processed_transcript MGP_LPJ_T0054541.1 MGP_LPJ_G0025651.1 mouse_genomes_project 2 47966139 47971876 - Orc4 protein_coding processed_transcript MGP_LPJ_T0054542.1 MGP_LPJ_G0025651.1 mouse_genomes_project 2 47966174 47973783 - Orc4 protein_coding processed_transcript MGP_LPJ_T0054543.1 MGP_LPJ_G0025651.1 mouse_genomes_project 2 47972611 48015062 - Orc4 protein_coding processed_transcript MGP_LPJ_T0054544.1 MGP_LPJ_G0025651.1 mouse_genomes_project 2 47978412 48015867 - MGP_LPJ_P0054544 Orc4 protein_coding protein_coding MGP_LPJ_T0054545.1 MGP_LPJ_G0025651.1 mouse_genomes_project 2 47992768 48003939 - Orc4 protein_coding processed_transcript MGP_LPJ_T0054546.1 MGP_LPJ_G0025651.1 mouse_genomes_project 2 47995100 48015062 - MGP_LPJ_P0054546 Orc4 protein_coding protein_coding MGP_LPJ_T0054547.1 MGP_LPJ_G0025651.1 mouse_genomes_project 2 48000052 48015060 - Orc4 protein_coding processed_transcript MGP_LPJ_T0054548.1 MGP_LPJ_G0025651.1 mouse_genomes_project 2 48000348 48015069 - MGP_LPJ_P0054548 Orc4 protein_coding protein_coding MGP_LPJ_T0054549.1 MGP_LPJ_G0025651.1 mouse_genomes_project 2 48000419 48016105 - MGP_LPJ_P0054549 Orc4 protein_coding protein_coding MGP_LPJ_T0013669.1 MGP_LPJ_G0011760.1 mouse_genomes_project 2 109330136 109330604 + processed_pseudogene processed_pseudogene MGP_LPJ_T0056490.1 MGP_LPJ_G0026185.1 mouse_genomes_project 2 113127869 113167580 + Slc5a12 protein_coding retained_intron MGP_LPJ_T0056491.1 MGP_LPJ_G0026185.1 mouse_genomes_project 2 113128052 113191207 + MGP_LPJ_P0056491 Slc5a12 protein_coding protein_coding MGP_LPJ_T0056492.1 MGP_LPJ_G0026185.1 mouse_genomes_project 2 113128174 113146034 + Slc5a12 protein_coding processed_transcript MGP_LPJ_T0056493.1 MGP_LPJ_G0026185.1 mouse_genomes_project 2 113145968 113191375 + Slc5a12 protein_coding processed_transcript MGP_LPJ_T0013569.1 MGP_LPJ_G0011660.1 mouse_genomes_project 2 75847659 75849662 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007383.1 MGP_LPJ_G0006055.1 mouse_genomes_project 2 161596406 161603331 + Gm14168 lincRNA lincRNA MGP_LPJ_T0004008.1 MGP_LPJ_G0003575.1 mouse_genomes_project 2 69746889 69749199 + Mettl5os antisense antisense MGP_LPJ_T0056765.1 MGP_LPJ_G0026280.1 mouse_genomes_project 2 122591442 122622763 - MGP_LPJ_P0056765 Exd1 protein_coding protein_coding MGP_LPJ_T0056766.1 MGP_LPJ_G0026280.1 mouse_genomes_project 2 122591448 122616841 - MGP_LPJ_P0056766 Exd1 protein_coding protein_coding MGP_LPJ_T0056767.1 MGP_LPJ_G0026280.1 mouse_genomes_project 2 122614168 122622330 - MGP_LPJ_P0056767 Exd1 protein_coding protein_coding MGP_LPJ_T0100583.1 MGP_LPJ_G0038846.1 mouse_genomes_project 2 45548210 45548327 - Gm25264 snoRNA snoRNA MGP_LPJ_T0013817.1 MGP_LPJ_G0011908.1 mouse_genomes_project 2 170195492 170195748 - processed_pseudogene processed_pseudogene MGP_LPJ_T0058294.1 MGP_LPJ_G0026637.1 mouse_genomes_project 2 158704050 158723153 + MGP_LPJ_P0058294 Bpifb2 protein_coding protein_coding MGP_LPJ_T0058295.1 MGP_LPJ_G0026637.1 mouse_genomes_project 2 158704080 158705391 + Bpifb2 protein_coding retained_intron MGP_LPJ_T0053462.1 MGP_LPJ_G0025467.1 mouse_genomes_project 2 27100842 27134903 + MGP_LPJ_P0053462 Ttf1 protein_coding protein_coding MGP_LPJ_T0053463.1 MGP_LPJ_G0025467.1 mouse_genomes_project 2 27100846 27134863 + Ttf1 protein_coding retained_intron MGP_LPJ_T0053464.1 MGP_LPJ_G0025467.1 mouse_genomes_project 2 27115228 27121586 + Ttf1 protein_coding retained_intron MGP_LPJ_T0053465.1 MGP_LPJ_G0025467.1 mouse_genomes_project 2 27123397 27131723 + Ttf1 protein_coding retained_intron MGP_LPJ_T0013514.1 MGP_LPJ_G0011605.1 mouse_genomes_project 2 55367112 55367345 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013560.1 MGP_LPJ_G0011651.1 mouse_genomes_project 2 72722328 72723485 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007258.1 MGP_LPJ_G0005955.1 mouse_genomes_project 2 78171171 78173491 + Gm13661 lincRNA lincRNA MGP_LPJ_T0054769.1 MGP_LPJ_G0025693.1 mouse_genomes_project 2 59857272 59999024 - MGP_LPJ_P0054769 Pla2r1 protein_coding protein_coding MGP_LPJ_T0054770.1 MGP_LPJ_G0025693.1 mouse_genomes_project 2 59859754 59864862 - Pla2r1 protein_coding processed_transcript MGP_LPJ_T0054771.1 MGP_LPJ_G0025693.1 mouse_genomes_project 2 59883302 59885838 - Pla2r1 protein_coding retained_intron MGP_LPJ_T0054772.1 MGP_LPJ_G0025693.1 mouse_genomes_project 2 59893469 59999024 - Pla2r1 protein_coding retained_intron MGP_LPJ_T0054773.1 MGP_LPJ_G0025693.1 mouse_genomes_project 2 59894334 59897597 - Pla2r1 protein_coding retained_intron MGP_LPJ_T0054774.1 MGP_LPJ_G0025693.1 mouse_genomes_project 2 59976953 59999024 - Pla2r1 protein_coding retained_intron MGP_LPJ_T0013801.1 MGP_LPJ_G0011892.1 mouse_genomes_project 2 161949226 161949770 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007251.1 MGP_LPJ_G0005948.1 mouse_genomes_project 2 74932687 74933330 + Gm14426 lincRNA lincRNA MGP_LPJ_T0098233.1 MGP_LPJ_G0036514.1 mouse_genomes_project 2 106464369 106464482 + Gm25554 rRNA rRNA MGP_LPJ_T0055024.1 MGP_LPJ_G0025741.1 mouse_genomes_project 2 69757953 69892821 + MGP_LPJ_P0055024 Ubr3 protein_coding protein_coding MGP_LPJ_T0055025.1 MGP_LPJ_G0025741.1 mouse_genomes_project 2 69757953 69892821 + MGP_LPJ_P0055025 Ubr3 protein_coding protein_coding MGP_LPJ_T0055026.1 MGP_LPJ_G0025741.1 mouse_genomes_project 2 69758010 69801231 + MGP_LPJ_P0055026 Ubr3 protein_coding protein_coding MGP_LPJ_T0055027.1 MGP_LPJ_G0025741.1 mouse_genomes_project 2 69797989 69807872 + Ubr3 protein_coding processed_transcript MGP_LPJ_T0055028.1 MGP_LPJ_G0025741.1 mouse_genomes_project 2 69853760 69876501 + MGP_LPJ_P0055028 Ubr3 protein_coding protein_coding MGP_LPJ_T0055029.1 MGP_LPJ_G0025741.1 mouse_genomes_project 2 69858732 69891353 + Ubr3 protein_coding processed_transcript MGP_LPJ_T0055030.1 MGP_LPJ_G0025741.1 mouse_genomes_project 2 69865493 69876639 + Ubr3 protein_coding processed_transcript MGP_LPJ_T0055031.1 MGP_LPJ_G0025741.1 mouse_genomes_project 2 69876319 69885273 + Ubr3 protein_coding processed_transcript MGP_LPJ_T0055032.1 MGP_LPJ_G0025741.1 mouse_genomes_project 2 69888935 69889994 + Ubr3 protein_coding processed_transcript MGP_LPJ_T0055033.1 MGP_LPJ_G0025741.1 mouse_genomes_project 2 69889319 69891028 + Ubr3 protein_coding processed_transcript MGP_LPJ_T0055757.1 MGP_LPJ_G0026025.1 mouse_genomes_project 2 90479927 90480863 - MGP_LPJ_P0055757 Olfr1224-ps1 protein_coding protein_coding MGP_LPJ_T0053658.1 MGP_LPJ_G0025496.1 mouse_genomes_project 2 28475725 28489970 - MGP_LPJ_P0053658 Sh3glb2 protein_coding protein_coding MGP_LPJ_T0053659.1 MGP_LPJ_G0025496.1 mouse_genomes_project 2 28475725 28490046 - MGP_LPJ_P0053659 Sh3glb2 protein_coding protein_coding MGP_LPJ_T0053660.1 MGP_LPJ_G0025496.1 mouse_genomes_project 2 28475727 28490019 - MGP_LPJ_P0053660 Sh3glb2 protein_coding protein_coding MGP_LPJ_T0053661.1 MGP_LPJ_G0025496.1 mouse_genomes_project 2 28475727 28489995 - MGP_LPJ_P0053661 Sh3glb2 protein_coding protein_coding MGP_LPJ_T0053662.1 MGP_LPJ_G0025496.1 mouse_genomes_project 2 28475727 28490062 - MGP_LPJ_P0053662 Sh3glb2 protein_coding protein_coding MGP_LPJ_T0053663.1 MGP_LPJ_G0025496.1 mouse_genomes_project 2 28476051 28490035 - Sh3glb2 protein_coding retained_intron MGP_LPJ_T0053664.1 MGP_LPJ_G0025496.1 mouse_genomes_project 2 28476057 28477018 - Sh3glb2 protein_coding processed_transcript MGP_LPJ_T0053665.1 MGP_LPJ_G0025496.1 mouse_genomes_project 2 28476736 28490067 - Sh3glb2 protein_coding processed_transcript MGP_LPJ_T0053666.1 MGP_LPJ_G0025496.1 mouse_genomes_project 2 28476802 28478573 - Sh3glb2 protein_coding retained_intron MGP_LPJ_T0053667.1 MGP_LPJ_G0025496.1 mouse_genomes_project 2 28477024 28478504 - Sh3glb2 protein_coding retained_intron MGP_LPJ_T0053668.1 MGP_LPJ_G0025496.1 mouse_genomes_project 2 28478984 28486094 - Sh3glb2 protein_coding retained_intron MGP_LPJ_T0053669.1 MGP_LPJ_G0025496.1 mouse_genomes_project 2 28479006 28485609 - Sh3glb2 protein_coding retained_intron MGP_LPJ_T0053670.1 MGP_LPJ_G0025496.1 mouse_genomes_project 2 28480399 28489975 - Sh3glb2 protein_coding processed_transcript MGP_LPJ_T0053671.1 MGP_LPJ_G0025496.1 mouse_genomes_project 2 28480656 28489990 - Sh3glb2 protein_coding retained_intron MGP_LPJ_T0004000.1 MGP_LPJ_G0003568.1 mouse_genomes_project 2 65601217 65612714 - Gm13617 antisense antisense MGP_LPJ_T0007419.1 MGP_LPJ_G0006085.1 mouse_genomes_project 2 173977810 173983157 - Gm14235 lincRNA lincRNA MGP_LPJ_T0102036.1 MGP_LPJ_G0040073.1 mouse_genomes_project 2 87359569 87360456 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0058496.1 MGP_LPJ_G0026685.1 mouse_genomes_project 2 160939131 160941153 + MGP_LPJ_P0058496 Gm15557 protein_coding protein_coding MGP_LPJ_T0053471.1 MGP_LPJ_G0025469.1 mouse_genomes_project 2 27248877 27314588 - MGP_LPJ_P0053471 Ntng2 protein_coding nonsense_mediated_decay MGP_LPJ_T0053472.1 MGP_LPJ_G0025469.1 mouse_genomes_project 2 27249130 27314562 - MGP_LPJ_P0053472 Ntng2 protein_coding protein_coding MGP_LPJ_T0053473.1 MGP_LPJ_G0025469.1 mouse_genomes_project 2 27249157 27314503 - MGP_LPJ_P0053473 Ntng2 protein_coding protein_coding MGP_LPJ_T0053474.1 MGP_LPJ_G0025469.1 mouse_genomes_project 2 27249157 27314503 - MGP_LPJ_P0053474 Ntng2 protein_coding protein_coding MGP_LPJ_T0053475.1 MGP_LPJ_G0025469.1 mouse_genomes_project 2 27249157 27314503 - MGP_LPJ_P0053475 Ntng2 protein_coding protein_coding MGP_LPJ_T0053476.1 MGP_LPJ_G0025469.1 mouse_genomes_project 2 27252804 27258361 - Ntng2 protein_coding processed_transcript MGP_LPJ_T0053477.1 MGP_LPJ_G0025469.1 mouse_genomes_project 2 27252977 27259259 - Ntng2 protein_coding processed_transcript MGP_LPJ_T0053478.1 MGP_LPJ_G0025469.1 mouse_genomes_project 2 27254898 27258361 - Ntng2 protein_coding processed_transcript MGP_LPJ_T0053479.1 MGP_LPJ_G0025469.1 mouse_genomes_project 2 27255012 27259259 - Ntng2 protein_coding processed_transcript MGP_LPJ_T0053480.1 MGP_LPJ_G0025469.1 mouse_genomes_project 2 27258158 27319467 - MGP_LPJ_P0053480 Ntng2 protein_coding protein_coding MGP_LPJ_T0053481.1 MGP_LPJ_G0025469.1 mouse_genomes_project 2 27288926 27314595 - Ntng2 protein_coding processed_transcript MGP_LPJ_T0052792.1 MGP_LPJ_G0025343.1 mouse_genomes_project 2 22565134 22677174 - MGP_LPJ_P0052792 Ehmt1 protein_coding protein_coding MGP_LPJ_T0052793.1 MGP_LPJ_G0025343.1 mouse_genomes_project 2 22565482 22707470 - MGP_LPJ_P0052793 Ehmt1 protein_coding protein_coding MGP_LPJ_T0052794.1 MGP_LPJ_G0025343.1 mouse_genomes_project 2 22565482 22580716 - MGP_LPJ_P0052794 Ehmt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0052795.1 MGP_LPJ_G0025343.1 mouse_genomes_project 2 22565482 22707470 - MGP_LPJ_P0052795 Ehmt1 protein_coding protein_coding MGP_LPJ_T0052796.1 MGP_LPJ_G0025343.1 mouse_genomes_project 2 22566289 22707512 - MGP_LPJ_P0052796 Ehmt1 protein_coding protein_coding MGP_LPJ_T0052797.1 MGP_LPJ_G0025343.1 mouse_genomes_project 2 22579593 22600486 - Ehmt1 protein_coding retained_intron MGP_LPJ_T0052798.1 MGP_LPJ_G0025343.1 mouse_genomes_project 2 22580630 22619198 - MGP_LPJ_P0052798 Ehmt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0052799.1 MGP_LPJ_G0025343.1 mouse_genomes_project 2 22580688 22581643 - Ehmt1 protein_coding processed_transcript MGP_LPJ_T0052800.1 MGP_LPJ_G0025343.1 mouse_genomes_project 2 22598422 22707486 - MGP_LPJ_P0052800 Ehmt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0052801.1 MGP_LPJ_G0025343.1 mouse_genomes_project 2 22600066 22633831 - MGP_LPJ_P0052801 Ehmt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0052802.1 MGP_LPJ_G0025343.1 mouse_genomes_project 2 22614708 22707475 - Ehmt1 protein_coding retained_intron MGP_LPJ_T0052803.1 MGP_LPJ_G0025343.1 mouse_genomes_project 2 22627633 22661025 - MGP_LPJ_P0052803 Ehmt1 protein_coding protein_coding MGP_LPJ_T0052804.1 MGP_LPJ_G0025343.1 mouse_genomes_project 2 22647074 22669059 - MGP_LPJ_P0052804 Ehmt1 protein_coding protein_coding MGP_LPJ_T0052805.1 MGP_LPJ_G0025343.1 mouse_genomes_project 2 22647143 22707503 - MGP_LPJ_P0052805 Ehmt1 protein_coding protein_coding MGP_LPJ_T0052806.1 MGP_LPJ_G0025343.1 mouse_genomes_project 2 22647740 22707494 - MGP_LPJ_P0052806 Ehmt1 protein_coding protein_coding MGP_LPJ_T0056293.1 MGP_LPJ_G0026144.1 mouse_genomes_project 2 105682962 105840653 + MGP_LPJ_P0056293 Abtb2 protein_coding protein_coding MGP_LPJ_T0056294.1 MGP_LPJ_G0026144.1 mouse_genomes_project 2 105837264 105839447 + Abtb2 protein_coding processed_transcript MGP_LPJ_T0056295.1 MGP_LPJ_G0026144.1 mouse_genomes_project 2 105837310 105840653 + Abtb2 protein_coding processed_transcript MGP_LPJ_T0053737.1 MGP_LPJ_G0025504.1 mouse_genomes_project 2 28994828 29012577 + MGP_LPJ_P0053737 Ntmt1 protein_coding protein_coding MGP_LPJ_T0053738.1 MGP_LPJ_G0025504.1 mouse_genomes_project 2 28994943 29012561 + MGP_LPJ_P0053738 Ntmt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053739.1 MGP_LPJ_G0025504.1 mouse_genomes_project 2 28994944 29011929 + MGP_LPJ_P0053739 Ntmt1 protein_coding protein_coding MGP_LPJ_T0053740.1 MGP_LPJ_G0025504.1 mouse_genomes_project 2 28994959 29004654 + Ntmt1 protein_coding processed_transcript MGP_LPJ_T0053741.1 MGP_LPJ_G0025504.1 mouse_genomes_project 2 28994996 29005118 + Ntmt1 protein_coding processed_transcript MGP_LPJ_T0053742.1 MGP_LPJ_G0025504.1 mouse_genomes_project 2 28995115 29012096 + MGP_LPJ_P0053742 Ntmt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053743.1 MGP_LPJ_G0025504.1 mouse_genomes_project 2 28995192 29009592 + MGP_LPJ_P0053743 Ntmt1 protein_coding protein_coding MGP_LPJ_T0053744.1 MGP_LPJ_G0025504.1 mouse_genomes_project 2 29007039 29009712 + MGP_LPJ_P0053744 Ntmt1 protein_coding protein_coding MGP_LPJ_T0053745.1 MGP_LPJ_G0025504.1 mouse_genomes_project 2 29008745 29012103 + MGP_LPJ_P0053745 Ntmt1 protein_coding protein_coding MGP_LPJ_T0007226.1 MGP_LPJ_G0005928.1 mouse_genomes_project 2 63961046 63972939 - Gm13575 lincRNA lincRNA MGP_LPJ_T0053342.1 MGP_LPJ_G0025443.1 mouse_genomes_project 2 25105264 25155271 - Sardh protein_coding processed_transcript MGP_LPJ_T0053343.1 MGP_LPJ_G0025443.1 mouse_genomes_project 2 25105264 25169724 - MGP_LPJ_P0053343 Sardh protein_coding protein_coding MGP_LPJ_T0053344.1 MGP_LPJ_G0025443.1 mouse_genomes_project 2 25106068 25109140 - Sardh protein_coding retained_intron MGP_LPJ_T0053345.1 MGP_LPJ_G0025443.1 mouse_genomes_project 2 25106253 25129740 - Sardh protein_coding processed_transcript MGP_LPJ_T0053346.1 MGP_LPJ_G0025443.1 mouse_genomes_project 2 25113562 25140318 - Sardh protein_coding retained_intron MGP_LPJ_T0053347.1 MGP_LPJ_G0025443.1 mouse_genomes_project 2 25130851 25135428 - Sardh protein_coding processed_transcript MGP_LPJ_T0053348.1 MGP_LPJ_G0025443.1 mouse_genomes_project 2 25130887 25147778 - Sardh protein_coding retained_intron MGP_LPJ_T0053349.1 MGP_LPJ_G0025443.1 mouse_genomes_project 2 25164040 25169306 - MGP_LPJ_P0053349 Sardh protein_coding protein_coding MGP_LPJ_T0053350.1 MGP_LPJ_G0025443.1 mouse_genomes_project 2 25164058 25170795 - MGP_LPJ_P0053350 Sardh protein_coding protein_coding MGP_LPJ_T0053351.1 MGP_LPJ_G0025443.1 mouse_genomes_project 2 25166857 25169872 - MGP_LPJ_P0053351 Sardh protein_coding protein_coding MGP_LPJ_T0058544.1 MGP_LPJ_G0026693.1 mouse_genomes_project 2 161069844 161111912 - MGP_LPJ_P0058544 Gm28036 protein_coding nonsense_mediated_decay MGP_LPJ_T0058545.1 MGP_LPJ_G0026693.1 mouse_genomes_project 2 161069844 161096110 - MGP_LPJ_P0058545 Gm28036 protein_coding nonsense_mediated_decay MGP_LPJ_T0058560.1 MGP_LPJ_G0026693.1 mouse_genomes_project 2 161076929 161122566 - MGP_LPJ_P0058560 Gm28036 protein_coding nonsense_mediated_decay MGP_LPJ_T0058561.1 MGP_LPJ_G0026693.1 mouse_genomes_project 2 161076929 161122566 - MGP_LPJ_P0058561 Gm28036 protein_coding nonsense_mediated_decay MGP_LPJ_T0058562.1 MGP_LPJ_G0026693.1 mouse_genomes_project 2 161076929 161122566 - MGP_LPJ_P0058562 Gm28036 protein_coding nonsense_mediated_decay MGP_LPJ_T0058563.1 MGP_LPJ_G0026693.1 mouse_genomes_project 2 161077091 161111937 - MGP_LPJ_P0058563 Gm28036 protein_coding nonsense_mediated_decay MGP_LPJ_T0058564.1 MGP_LPJ_G0026693.1 mouse_genomes_project 2 161077097 161094953 - MGP_LPJ_P0058564 Gm28036 protein_coding nonsense_mediated_decay MGP_LPJ_T0058565.1 MGP_LPJ_G0026693.1 mouse_genomes_project 2 161077424 161111942 - MGP_LPJ_P0058565 Gm28036 protein_coding protein_coding MGP_LPJ_T0100565.1 MGP_LPJ_G0038828.1 mouse_genomes_project 2 24543897 24544036 - Snhg7 snoRNA snoRNA MGP_LPJ_T0099346.1 MGP_LPJ_G0037609.1 mouse_genomes_project 2 119907963 119908098 - Gm25514 snRNA snRNA MGP_LPJ_T0013599.1 MGP_LPJ_G0011690.1 mouse_genomes_project 2 84052790 84052931 - processed_pseudogene processed_pseudogene MGP_LPJ_T0052351.1 MGP_LPJ_G0025266.1 mouse_genomes_project 2 7127807 7158445 - Taf3 protein_coding processed_transcript MGP_LPJ_T0052352.1 MGP_LPJ_G0025266.1 mouse_genomes_project 2 7128111 7273963 - MGP_LPJ_P0052352 Taf3 protein_coding protein_coding MGP_LPJ_T0052353.1 MGP_LPJ_G0025266.1 mouse_genomes_project 2 7128592 7131351 - MGP_LPJ_P0052353 Taf3 protein_coding protein_coding MGP_LPJ_T0052354.1 MGP_LPJ_G0025266.1 mouse_genomes_project 2 7128594 7130925 - MGP_LPJ_P0052354 Taf3 protein_coding protein_coding MGP_LPJ_T0013580.1 MGP_LPJ_G0011671.1 mouse_genomes_project 2 79220498 79220666 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013440.1 MGP_LPJ_G0011531.1 mouse_genomes_project 2 26834903 26835027 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017818.1 MGP_LPJ_G0015386.1 mouse_genomes_project 2 134255108 134274937 - 4930473A02Rik processed_transcript processed_transcript MGP_LPJ_T0007431.1 MGP_LPJ_G0006096.1 mouse_genomes_project 2 175587706 175864188 - lincRNA lincRNA MGP_LPJ_T0007432.1 MGP_LPJ_G0006096.1 mouse_genomes_project 2 175587736 175864188 - lincRNA lincRNA MGP_LPJ_T0013664.1 MGP_LPJ_G0011755.1 mouse_genomes_project 2 107060655 107062825 + processed_pseudogene processed_pseudogene MGP_LPJ_T0058961.1 MGP_LPJ_G0026781.1 mouse_genomes_project 2 169828252 169829955 + MGP_LPJ_P0058961 Svs6 protein_coding protein_coding MGP_LPJ_T0055383.1 MGP_LPJ_G0025811.1 mouse_genomes_project 2 80031416 80068873 + MGP_LPJ_P0055383 Ssfa2 protein_coding protein_coding MGP_LPJ_T0055384.1 MGP_LPJ_G0025811.1 mouse_genomes_project 2 80031490 80068873 + MGP_LPJ_P0055384 Ssfa2 protein_coding protein_coding MGP_LPJ_T0055385.1 MGP_LPJ_G0025811.1 mouse_genomes_project 2 80031519 80068873 + MGP_LPJ_P0055385 Ssfa2 protein_coding protein_coding MGP_LPJ_T0055386.1 MGP_LPJ_G0025811.1 mouse_genomes_project 2 80031525 80032510 + Ssfa2 protein_coding processed_transcript MGP_LPJ_T0055387.1 MGP_LPJ_G0025811.1 mouse_genomes_project 2 80035202 80068873 + Ssfa2 protein_coding processed_transcript MGP_LPJ_T0056996.1 MGP_LPJ_G0026319.1 mouse_genomes_project 2 124304285 124314621 - MGP_LPJ_P0056996 Zscan29 protein_coding protein_coding MGP_LPJ_T0056997.1 MGP_LPJ_G0026319.1 mouse_genomes_project 2 124304285 124313620 - MGP_LPJ_P0056997 Zscan29 protein_coding protein_coding MGP_LPJ_T0056998.1 MGP_LPJ_G0026319.1 mouse_genomes_project 2 124305071 124308010 - Zscan29 protein_coding retained_intron MGP_LPJ_T0102049.1 MGP_LPJ_G0040086.1 mouse_genomes_project 2 89232011 89232962 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0057827.1 MGP_LPJ_G0026507.1 mouse_genomes_project 2 144311427 144465115 - MGP_LPJ_P0057827 Sel1l2 protein_coding protein_coding MGP_LPJ_T0057828.1 MGP_LPJ_G0026507.1 mouse_genomes_project 2 144378351 144380783 - Sel1l2 protein_coding processed_transcript MGP_LPJ_T0057829.1 MGP_LPJ_G0026507.1 mouse_genomes_project 2 144378356 144465117 - MGP_LPJ_P0057829 Sel1l2 protein_coding protein_coding MGP_LPJ_T0003936.1 MGP_LPJ_G0003519.1 mouse_genomes_project 2 23935707 23936939 + Gm13554 antisense antisense MGP_LPJ_T0055272.1 MGP_LPJ_G0025794.1 mouse_genomes_project 2 76247981 76264910 - MGP_LPJ_P0055272 Pde11a protein_coding protein_coding MGP_LPJ_T0055273.1 MGP_LPJ_G0025794.1 mouse_genomes_project 2 76248745 76613051 - MGP_LPJ_P0055273 Pde11a protein_coding protein_coding MGP_LPJ_T0055274.1 MGP_LPJ_G0025794.1 mouse_genomes_project 2 76288424 76486916 - MGP_LPJ_P0055274 Pde11a protein_coding protein_coding MGP_LPJ_T0013417.1 MGP_LPJ_G0011508.1 mouse_genomes_project 2 17230968 17231073 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013605.1 MGP_LPJ_G0011696.1 mouse_genomes_project 2 87138290 87144347 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013808.1 MGP_LPJ_G0011899.1 mouse_genomes_project 2 165036788 165037308 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013795.1 MGP_LPJ_G0011886.1 mouse_genomes_project 2 161327116 161328805 + processed_pseudogene processed_pseudogene MGP_LPJ_T0055686.1 MGP_LPJ_G0025960.1 mouse_genomes_project 2 88824892 88825825 - MGP_LPJ_P0055686 Olfr1136 protein_coding protein_coding MGP_LPJ_T0100588.1 MGP_LPJ_G0038851.1 mouse_genomes_project 2 57044646 57044797 - Gm25388 snoRNA snoRNA MGP_LPJ_T0059419.1 MGP_LPJ_G0026893.1 mouse_genomes_project 2 179880293 179928369 + MGP_LPJ_P0059419 Rab22a protein_coding protein_coding MGP_LPJ_T0059420.1 MGP_LPJ_G0026893.1 mouse_genomes_project 2 179880293 179928341 + MGP_LPJ_P0059420 Rab22a protein_coding nonsense_mediated_decay MGP_LPJ_T0059421.1 MGP_LPJ_G0026893.1 mouse_genomes_project 2 179880389 179922180 + MGP_LPJ_P0059421 Rab22a protein_coding protein_coding MGP_LPJ_T0010396.1 MGP_LPJ_G0008514.1 mouse_genomes_project 2 15079676 15079789 + Mir6419 miRNA miRNA MGP_LPJ_T0013790.1 MGP_LPJ_G0011881.1 mouse_genomes_project 2 160457782 160458108 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055779.1 MGP_LPJ_G0026041.1 mouse_genomes_project 2 90884214 90885138 - MGP_LPJ_P0055779 Olfr1245 protein_coding protein_coding MGP_LPJ_T0052259.1 MGP_LPJ_G0025250.1 mouse_genomes_project 2 2092607 2111936 - Optn protein_coding processed_transcript MGP_LPJ_T0052260.1 MGP_LPJ_G0025250.1 mouse_genomes_project 2 2092607 2143134 - MGP_LPJ_P0052260 Optn protein_coding protein_coding MGP_LPJ_T0052261.1 MGP_LPJ_G0025250.1 mouse_genomes_project 2 2092609 2143027 - MGP_LPJ_P0052261 Optn protein_coding protein_coding MGP_LPJ_T0052262.1 MGP_LPJ_G0025250.1 mouse_genomes_project 2 2093266 2113230 - Optn protein_coding processed_transcript MGP_LPJ_T0052263.1 MGP_LPJ_G0025250.1 mouse_genomes_project 2 2124878 2143140 - Optn protein_coding processed_transcript MGP_LPJ_T0100601.1 MGP_LPJ_G0038864.1 mouse_genomes_project 2 99050583 99050712 + Gm22313 snoRNA snoRNA MGP_LPJ_T0013609.1 MGP_LPJ_G0011700.1 mouse_genomes_project 2 88255312 88255982 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013755.1 MGP_LPJ_G0011846.1 mouse_genomes_project 2 148594711 148595114 + processed_pseudogene processed_pseudogene MGP_LPJ_T0052558.1 MGP_LPJ_G0025299.1 mouse_genomes_project 2 14842651 15252020 - MGP_LPJ_P0052558 protein_coding protein_coding MGP_LPJ_T0052559.1 MGP_LPJ_G0025299.1 mouse_genomes_project 2 14842796 14972820 - MGP_LPJ_P0052559 protein_coding protein_coding MGP_LPJ_T0052560.1 MGP_LPJ_G0025299.1 mouse_genomes_project 2 14847436 14863221 - protein_coding processed_transcript MGP_LPJ_T0052561.1 MGP_LPJ_G0025299.1 mouse_genomes_project 2 14847436 14972426 - MGP_LPJ_P0052561 protein_coding unknown_likely_coding MGP_LPJ_T0052562.1 MGP_LPJ_G0025299.1 mouse_genomes_project 2 14849497 15044170 - MGP_LPJ_P0052562 protein_coding protein_coding MGP_LPJ_T0052563.1 MGP_LPJ_G0025299.1 mouse_genomes_project 2 14878343 14895176 - protein_coding processed_transcript MGP_LPJ_T0052564.1 MGP_LPJ_G0025299.1 mouse_genomes_project 2 14879957 14895219 - protein_coding processed_transcript MGP_LPJ_T0052565.1 MGP_LPJ_G0025299.1 mouse_genomes_project 2 14880214 14895245 - MGP_LPJ_P0052565 protein_coding protein_coding MGP_LPJ_T0052566.1 MGP_LPJ_G0025299.1 mouse_genomes_project 2 14882934 14895206 - protein_coding processed_transcript MGP_LPJ_T0052567.1 MGP_LPJ_G0025299.1 mouse_genomes_project 2 14897139 14974675 - MGP_LPJ_P0052567 protein_coding protein_coding MGP_LPJ_T0052568.1 MGP_LPJ_G0025299.1 mouse_genomes_project 2 14897142 14974677 - MGP_LPJ_P0052568 protein_coding protein_coding MGP_LPJ_T0052569.1 MGP_LPJ_G0025299.1 mouse_genomes_project 2 14902588 14972509 - MGP_LPJ_P0052569 protein_coding protein_coding MGP_LPJ_T0052570.1 MGP_LPJ_G0025299.1 mouse_genomes_project 2 14941886 15042514 - protein_coding processed_transcript MGP_LPJ_T0052571.1 MGP_LPJ_G0025299.1 mouse_genomes_project 2 15248362 15252441 - protein_coding processed_transcript MGP_LPJ_T0007371.1 MGP_LPJ_G0006045.1 mouse_genomes_project 2 155337092 155339574 - Gm26681 lincRNA lincRNA MGP_LPJ_T0013672.1 MGP_LPJ_G0011763.1 mouse_genomes_project 2 109429807 109430752 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100571.1 MGP_LPJ_G0038834.1 mouse_genomes_project 2 29412432 29412556 + Gm22516 snoRNA snoRNA MGP_LPJ_T0099347.1 MGP_LPJ_G0037610.1 mouse_genomes_project 2 120204508 120204672 + Gm25189 snRNA snRNA MGP_LPJ_T0013368.1 MGP_LPJ_G0011459.1 mouse_genomes_project 2 23366 23882 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102012.1 MGP_LPJ_G0040049.1 mouse_genomes_project 2 34926095 34927034 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0010504.1 MGP_LPJ_G0008622.1 mouse_genomes_project 2 179032978 179033056 - Gm22773 miRNA miRNA MGP_LPJ_T0004139.1 MGP_LPJ_G0003662.1 mouse_genomes_project 2 156195201 156196819 - Gm14167 antisense antisense MGP_LPJ_T0052524.1 MGP_LPJ_G0025293.1 mouse_genomes_project 2 11826449 11927245 + MGP_LPJ_P0052524 Slc39a12 protein_coding protein_coding MGP_LPJ_T0052525.1 MGP_LPJ_G0025293.1 mouse_genomes_project 2 11826637 11827665 + MGP_LPJ_P0052525 Slc39a12 protein_coding protein_coding MGP_LPJ_T0054424.1 MGP_LPJ_G0025635.1 mouse_genomes_project 2 37341010 37358697 - MGP_LPJ_P0054424 Nr5a1 protein_coding unknown_likely_coding MGP_LPJ_T0054425.1 MGP_LPJ_G0025635.1 mouse_genomes_project 2 37348306 37358155 - Nr5a1 protein_coding retained_intron MGP_LPJ_T0053315.1 MGP_LPJ_G0025436.1 mouse_genomes_project 2 24894099 24919667 + MGP_LPJ_P0053315 Adamts13 protein_coding protein_coding MGP_LPJ_T0053316.1 MGP_LPJ_G0025436.1 mouse_genomes_project 2 24894176 24925633 + MGP_LPJ_P0053316 Adamts13 protein_coding protein_coding MGP_LPJ_T0053317.1 MGP_LPJ_G0025436.1 mouse_genomes_project 2 24921836 24925450 + Adamts13 protein_coding processed_transcript MGP_LPJ_T0007339.1 MGP_LPJ_G0006020.1 mouse_genomes_project 2 132841552 132858885 + A730036I17Rik lincRNA lincRNA MGP_LPJ_T0007340.1 MGP_LPJ_G0006020.1 mouse_genomes_project 2 132841611 132856552 + A730036I17Rik lincRNA lincRNA MGP_LPJ_T0007341.1 MGP_LPJ_G0006020.1 mouse_genomes_project 2 132851324 132855269 + A730036I17Rik lincRNA lincRNA MGP_LPJ_T0056706.1 MGP_LPJ_G0026263.1 mouse_genomes_project 2 121962696 121964786 + MGP_LPJ_P0056706 Chst14 protein_coding protein_coding MGP_LPJ_T0056707.1 MGP_LPJ_G0026263.1 mouse_genomes_project 2 121962714 121964780 + MGP_LPJ_P0056707 Chst14 protein_coding protein_coding MGP_LPJ_T0057714.1 MGP_LPJ_G0026480.1 mouse_genomes_project 2 136343810 136398919 - MGP_LPJ_P0057714 Gpcpd1 protein_coding protein_coding MGP_LPJ_T0057715.1 MGP_LPJ_G0026480.1 mouse_genomes_project 2 136343817 136356767 - Gpcpd1 protein_coding retained_intron MGP_LPJ_T0057716.1 MGP_LPJ_G0026480.1 mouse_genomes_project 2 136343817 136399073 - MGP_LPJ_P0057716 Gpcpd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0057717.1 MGP_LPJ_G0026480.1 mouse_genomes_project 2 136343817 136399060 - MGP_LPJ_P0057717 Gpcpd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0057718.1 MGP_LPJ_G0026480.1 mouse_genomes_project 2 136343817 136399058 - MGP_LPJ_P0057718 Gpcpd1 protein_coding protein_coding MGP_LPJ_T0057719.1 MGP_LPJ_G0026480.1 mouse_genomes_project 2 136343817 136399003 - MGP_LPJ_P0057719 Gpcpd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0057720.1 MGP_LPJ_G0026480.1 mouse_genomes_project 2 136343818 136399073 - MGP_LPJ_P0057720 Gpcpd1 protein_coding protein_coding MGP_LPJ_T0057721.1 MGP_LPJ_G0026480.1 mouse_genomes_project 2 136348887 136352863 - MGP_LPJ_P0057721 Gpcpd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0057722.1 MGP_LPJ_G0026480.1 mouse_genomes_project 2 136365193 136399012 - MGP_LPJ_P0057722 Gpcpd1 protein_coding protein_coding MGP_LPJ_T0057723.1 MGP_LPJ_G0026480.1 mouse_genomes_project 2 136371607 136408555 - MGP_LPJ_P0057723 Gpcpd1 protein_coding protein_coding MGP_LPJ_T0057724.1 MGP_LPJ_G0026480.1 mouse_genomes_project 2 136371719 136399042 - Gpcpd1 protein_coding processed_transcript MGP_LPJ_T0057725.1 MGP_LPJ_G0026480.1 mouse_genomes_project 2 136384696 136399071 - Gpcpd1 protein_coding processed_transcript MGP_LPJ_T0101522.1 MGP_LPJ_G0039647.1 mouse_genomes_project 2 89254150 89453067 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0055611.1 MGP_LPJ_G0025895.1 mouse_genomes_project 2 86947386 86948331 - MGP_LPJ_P0055611 Olfr1044 protein_coding protein_coding MGP_LPJ_T0054441.1 MGP_LPJ_G0025639.1 mouse_genomes_project 2 37676011 37680860 - MGP_LPJ_P0054441 Rpl35 protein_coding protein_coding MGP_LPJ_T0054442.1 MGP_LPJ_G0025639.1 mouse_genomes_project 2 37676050 37680279 - Rpl35 protein_coding processed_transcript MGP_LPJ_T0054443.1 MGP_LPJ_G0025639.1 mouse_genomes_project 2 37679847 37680358 - Rpl35 protein_coding processed_transcript MGP_LPJ_T0017721.1 MGP_LPJ_G0015335.1 mouse_genomes_project 2 51637831 51647697 + A430018G15Rik processed_transcript processed_transcript MGP_LPJ_T0017722.1 MGP_LPJ_G0015335.1 mouse_genomes_project 2 51637831 51644705 + A430018G15Rik processed_transcript processed_transcript MGP_LPJ_T0013392.1 MGP_LPJ_G0011483.1 mouse_genomes_project 2 8941814 8943078 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013442.1 MGP_LPJ_G0011533.1 mouse_genomes_project 2 29122455 29122835 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055498.1 MGP_LPJ_G0025837.1 mouse_genomes_project 2 85208377 85213259 - MGP_LPJ_P0055498 Clp1 protein_coding protein_coding MGP_LPJ_T0055499.1 MGP_LPJ_G0025837.1 mouse_genomes_project 2 85209136 85213367 - MGP_LPJ_P0055499 Clp1 protein_coding protein_coding MGP_LPJ_T0055500.1 MGP_LPJ_G0025837.1 mouse_genomes_project 2 85209138 85213293 - Clp1 protein_coding processed_transcript MGP_LPJ_T0004040.1 MGP_LPJ_G0003596.1 mouse_genomes_project 2 85653638 85691445 + Gm13713 antisense antisense MGP_LPJ_T0004041.1 MGP_LPJ_G0003596.1 mouse_genomes_project 2 85653638 85666779 + Gm13713 antisense antisense MGP_LPJ_T0099322.1 MGP_LPJ_G0037585.1 mouse_genomes_project 2 26611665 26611769 + Gm22675 snRNA snRNA MGP_LPJ_T0100634.1 MGP_LPJ_G0038897.1 mouse_genomes_project 2 163519122 163519253 - Gm24411 snoRNA snoRNA MGP_LPJ_T0004187.1 MGP_LPJ_G0003700.1 mouse_genomes_project 2 172933924 172935148 + Gm14291 antisense antisense MGP_LPJ_T0055601.1 MGP_LPJ_G0025885.1 mouse_genomes_project 2 86733922 86734767 + MGP_LPJ_P0055601 protein_coding protein_coding MGP_LPJ_T0007191.1 MGP_LPJ_G0005899.1 mouse_genomes_project 2 32488619 32583073 - C230014O12Rik lincRNA lincRNA MGP_LPJ_T0007193.1 MGP_LPJ_G0005899.1 mouse_genomes_project 2 32575387 32583079 - C230014O12Rik lincRNA lincRNA MGP_LPJ_T0017859.1 MGP_LPJ_G0015405.1 mouse_genomes_project 2 171482371 171483721 + BC046401 processed_transcript processed_transcript MGP_LPJ_T0010476.1 MGP_LPJ_G0008594.1 mouse_genomes_project 2 130544540 130544665 + Gm24081 miRNA miRNA MGP_LPJ_T0098412.1 MGP_LPJ_G0036693.1 mouse_genomes_project 2 109218994 109219117 + Gm22813 scaRNA scaRNA MGP_LPJ_T0100636.1 MGP_LPJ_G0038899.1 mouse_genomes_project 2 163522497 163522629 - Gm23925 snoRNA snoRNA MGP_LPJ_T0010463.1 MGP_LPJ_G0008581.1 mouse_genomes_project 2 106633107 106633187 - Mir1902 miRNA miRNA MGP_LPJ_T0007228.1 MGP_LPJ_G0005930.1 mouse_genomes_project 2 66864147 66908506 - Gm13598 lincRNA lincRNA MGP_LPJ_T0004168.1 MGP_LPJ_G0003688.1 mouse_genomes_project 2 168975563 169017853 - Hnf4aos antisense antisense MGP_LPJ_T0004169.1 MGP_LPJ_G0003688.1 mouse_genomes_project 2 168975563 169017853 - Hnf4aos antisense antisense MGP_LPJ_T0004170.1 MGP_LPJ_G0003688.1 mouse_genomes_project 2 168975950 169017825 - Hnf4aos antisense antisense MGP_LPJ_T0007394.1 MGP_LPJ_G0006064.1 mouse_genomes_project 2 166532103 166532695 - Gm14242 lincRNA lincRNA MGP_LPJ_T0056625.1 MGP_LPJ_G0026244.1 mouse_genomes_project 2 120072638 120135303 + MGP_LPJ_P0056625 Spred1 protein_coding protein_coding MGP_LPJ_T0056626.1 MGP_LPJ_G0026244.1 mouse_genomes_project 2 120072902 120125896 + MGP_LPJ_P0056626 Spred1 protein_coding protein_coding MGP_LPJ_T0057141.1 MGP_LPJ_G0026342.1 mouse_genomes_project 2 125351637 125428421 - MGP_LPJ_P0057141 Patl2 protein_coding protein_coding MGP_LPJ_T0059659.1 MGP_LPJ_G0026947.1 mouse_genomes_project 2 187809440 187812323 + MGP_LPJ_P0059659 BC051628 protein_coding protein_coding MGP_LPJ_T0059660.1 MGP_LPJ_G0026947.1 mouse_genomes_project 2 187809464 187811918 + MGP_LPJ_P0059660 BC051628 protein_coding protein_coding MGP_LPJ_T0054473.1 MGP_LPJ_G0025644.1 mouse_genomes_project 2 38884718 38885143 - MGP_LPJ_P0054473 protein_coding protein_coding MGP_LPJ_T0010445.1 MGP_LPJ_G0008563.1 mouse_genomes_project 2 76589639 76589753 + Gm44337 miRNA miRNA MGP_LPJ_T0055719.1 MGP_LPJ_G0025991.1 mouse_genomes_project 2 89675635 89676402 - MGP_LPJ_P0055719 protein_coding protein_coding MGP_LPJ_T0058011.1 MGP_LPJ_G0026554.1 mouse_genomes_project 2 153307911 153318725 + MGP_LPJ_P0058011 Cst13 protein_coding protein_coding MGP_LPJ_T0013738.1 MGP_LPJ_G0011829.1 mouse_genomes_project 2 142927071 142927385 - processed_pseudogene processed_pseudogene MGP_LPJ_T0052625.1 MGP_LPJ_G0025309.1 mouse_genomes_project 2 16408015 16569494 - MGP_LPJ_P0052625 Pip4k2a protein_coding protein_coding MGP_LPJ_T0052626.1 MGP_LPJ_G0025309.1 mouse_genomes_project 2 16410131 16438909 - MGP_LPJ_P0052626 Pip4k2a protein_coding protein_coding MGP_LPJ_T0052627.1 MGP_LPJ_G0025309.1 mouse_genomes_project 2 16413257 16474172 - MGP_LPJ_P0052627 Pip4k2a protein_coding protein_coding MGP_LPJ_T0053438.1 MGP_LPJ_G0025461.1 mouse_genomes_project 2 26714640 26723024 - MGP_LPJ_P0053438 Spaca9 protein_coding protein_coding MGP_LPJ_T0053439.1 MGP_LPJ_G0025461.1 mouse_genomes_project 2 26714644 26723056 - MGP_LPJ_P0053439 Spaca9 protein_coding protein_coding MGP_LPJ_T0053440.1 MGP_LPJ_G0025461.1 mouse_genomes_project 2 26715572 26723100 - Spaca9 protein_coding processed_transcript MGP_LPJ_T0053441.1 MGP_LPJ_G0025461.1 mouse_genomes_project 2 26716260 26723047 - Spaca9 protein_coding processed_transcript MGP_LPJ_T0057521.1 MGP_LPJ_G0026440.1 mouse_genomes_project 2 134116301 134117113 + MGP_LPJ_P0057521 1700020A23Rik protein_coding protein_coding MGP_LPJ_T0057522.1 MGP_LPJ_G0026440.1 mouse_genomes_project 2 134116307 134117061 + MGP_LPJ_P0057522 1700020A23Rik protein_coding protein_coding MGP_LPJ_T0057523.1 MGP_LPJ_G0026440.1 mouse_genomes_project 2 134116328 134117117 + MGP_LPJ_P0057523 1700020A23Rik protein_coding protein_coding MGP_LPJ_T0003967.1 MGP_LPJ_G0003544.1 mouse_genomes_project 2 32085586 32086987 + C130021I20Rik antisense antisense MGP_LPJ_T0003968.1 MGP_LPJ_G0003544.1 mouse_genomes_project 2 32085724 32090748 + C130021I20Rik antisense antisense MGP_LPJ_T0053318.1 MGP_LPJ_G0025437.1 mouse_genomes_project 2 24925930 24932854 + MGP_LPJ_P0053318 Cacfd1 protein_coding protein_coding MGP_LPJ_T0053319.1 MGP_LPJ_G0025437.1 mouse_genomes_project 2 24925930 24933429 + MGP_LPJ_P0053319 Cacfd1 protein_coding protein_coding MGP_LPJ_T0053320.1 MGP_LPJ_G0025437.1 mouse_genomes_project 2 24925930 24937325 + MGP_LPJ_P0053320 Cacfd1 protein_coding protein_coding MGP_LPJ_T0053321.1 MGP_LPJ_G0025437.1 mouse_genomes_project 2 24925930 24937325 + MGP_LPJ_P0053321 Cacfd1 protein_coding protein_coding MGP_LPJ_T0053322.1 MGP_LPJ_G0025437.1 mouse_genomes_project 2 24926017 24934426 + Cacfd1 protein_coding processed_transcript MGP_LPJ_T0053323.1 MGP_LPJ_G0025437.1 mouse_genomes_project 2 24926086 24931908 + MGP_LPJ_P0053323 Cacfd1 protein_coding protein_coding MGP_LPJ_T0053324.1 MGP_LPJ_G0025437.1 mouse_genomes_project 2 24926597 24936534 + MGP_LPJ_P0053324 Cacfd1 protein_coding protein_coding MGP_LPJ_T0053325.1 MGP_LPJ_G0025437.1 mouse_genomes_project 2 24931587 24933440 + Cacfd1 protein_coding retained_intron MGP_LPJ_T0004023.1 MGP_LPJ_G0003585.1 mouse_genomes_project 2 73743816 73748973 + Chrna1os antisense antisense MGP_LPJ_T0004024.1 MGP_LPJ_G0003585.1 mouse_genomes_project 2 73743826 73748994 + Chrna1os antisense antisense MGP_LPJ_T0058457.1 MGP_LPJ_G0026677.1 mouse_genomes_project 2 160683616 160711305 - MGP_LPJ_P0058457 Edem2 protein_coding protein_coding MGP_LPJ_T0058458.1 MGP_LPJ_G0026677.1 mouse_genomes_project 2 160687654 160695261 - Edem2 protein_coding processed_transcript MGP_LPJ_T0058459.1 MGP_LPJ_G0026677.1 mouse_genomes_project 2 160690492 160692935 - Edem2 protein_coding retained_intron MGP_LPJ_T0058460.1 MGP_LPJ_G0026677.1 mouse_genomes_project 2 160690948 160698345 - Edem2 protein_coding retained_intron MGP_LPJ_T0055649.1 MGP_LPJ_G0025932.1 mouse_genomes_project 2 88047821 88048760 - MGP_LPJ_P0055649 Olfr1106 protein_coding protein_coding MGP_LPJ_T0055583.1 MGP_LPJ_G0025869.1 mouse_genomes_project 2 86410643 86414546 + MGP_LPJ_P0055583 protein_coding protein_coding MGP_LPJ_T0004101.1 MGP_LPJ_G0003636.1 mouse_genomes_project 2 132997150 133002998 + Il1bos antisense antisense MGP_LPJ_T0004102.1 MGP_LPJ_G0003636.1 mouse_genomes_project 2 132997155 133002983 + Il1bos antisense antisense MGP_LPJ_T0004103.1 MGP_LPJ_G0003636.1 mouse_genomes_project 2 133000378 133002327 + Il1bos antisense antisense MGP_LPJ_T0056755.1 MGP_LPJ_G0026275.1 mouse_genomes_project 2 122326405 122328477 - MGP_LPJ_P0056755 Rhov protein_coding protein_coding MGP_LPJ_T0055531.1 MGP_LPJ_G0025847.1 mouse_genomes_project 2 85476785 85479967 + MGP_LPJ_P0055531 Prg2 protein_coding protein_coding MGP_LPJ_T0013439.1 MGP_LPJ_G0011530.1 mouse_genomes_project 2 26819273 26819493 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055637.1 MGP_LPJ_G0025920.1 mouse_genomes_project 2 87697977 87698919 - MGP_LPJ_P0055637 Olfr1090 protein_coding protein_coding MGP_LPJ_T0013757.1 MGP_LPJ_G0011848.1 mouse_genomes_project 2 149210792 149211613 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003977.1 MGP_LPJ_G0003551.1 mouse_genomes_project 2 36989853 36994254 - Gm13584 antisense antisense MGP_LPJ_T0059371.1 MGP_LPJ_G0026877.1 mouse_genomes_project 2 178471666 178477045 + MGP_LPJ_P0059371 Cstf1 protein_coding protein_coding MGP_LPJ_T0059372.1 MGP_LPJ_G0026877.1 mouse_genomes_project 2 178471719 178483386 + MGP_LPJ_P0059372 Cstf1 protein_coding protein_coding MGP_LPJ_T0052265.1 MGP_LPJ_G0025252.1 mouse_genomes_project 2 2384737 2798759 - MGP_LPJ_P0052265 Camk1d protein_coding protein_coding MGP_LPJ_T0052266.1 MGP_LPJ_G0025252.1 mouse_genomes_project 2 2390165 2767575 - MGP_LPJ_P0052266 Camk1d protein_coding protein_coding MGP_LPJ_T0052267.1 MGP_LPJ_G0025252.1 mouse_genomes_project 2 2538789 2767929 - Camk1d protein_coding processed_transcript MGP_LPJ_T0052268.1 MGP_LPJ_G0025252.1 mouse_genomes_project 2 2656481 2798747 - Camk1d protein_coding processed_transcript MGP_LPJ_T0007421.1 MGP_LPJ_G0006087.1 mouse_genomes_project 2 174131947 174138053 - Gm14262 lincRNA lincRNA MGP_LPJ_T0059826.1 MGP_LPJ_G0026971.1 mouse_genomes_project 2 188516159 188522653 + MGP_LPJ_P0059826 Polr3k protein_coding protein_coding MGP_LPJ_T0059827.1 MGP_LPJ_G0026971.1 mouse_genomes_project 2 188516182 188518032 + Polr3k protein_coding retained_intron MGP_LPJ_T0057544.1 MGP_LPJ_G0026445.1 mouse_genomes_project 2 134274929 134276583 + Mrps26 protein_coding retained_intron MGP_LPJ_T0057545.1 MGP_LPJ_G0026445.1 mouse_genomes_project 2 134274929 134279849 + MGP_LPJ_P0057545 Mrps26 protein_coding protein_coding MGP_LPJ_T0013621.1 MGP_LPJ_G0011712.1 mouse_genomes_project 2 89019674 89020201 + processed_pseudogene processed_pseudogene MGP_LPJ_T0053110.1 MGP_LPJ_G0025405.1 mouse_genomes_project 2 23729233 23782504 + MGP_LPJ_P0053110 Kcnt1 protein_coding protein_coding MGP_LPJ_T0053111.1 MGP_LPJ_G0025405.1 mouse_genomes_project 2 23729294 23754407 + Kcnt1 protein_coding retained_intron MGP_LPJ_T0053112.1 MGP_LPJ_G0025405.1 mouse_genomes_project 2 23729353 23781576 + MGP_LPJ_P0053112 Kcnt1 protein_coding protein_coding MGP_LPJ_T0053113.1 MGP_LPJ_G0025405.1 mouse_genomes_project 2 23729467 23781576 + MGP_LPJ_P0053113 Kcnt1 protein_coding protein_coding MGP_LPJ_T0053114.1 MGP_LPJ_G0025405.1 mouse_genomes_project 2 23743248 23783022 + MGP_LPJ_P0053114 Kcnt1 protein_coding protein_coding MGP_LPJ_T0053115.1 MGP_LPJ_G0025405.1 mouse_genomes_project 2 23743322 23760640 + Kcnt1 protein_coding retained_intron MGP_LPJ_T0053116.1 MGP_LPJ_G0025405.1 mouse_genomes_project 2 23743328 23782070 + MGP_LPJ_P0053116 Kcnt1 protein_coding protein_coding MGP_LPJ_T0053117.1 MGP_LPJ_G0025405.1 mouse_genomes_project 2 23743335 23782539 + Kcnt1 protein_coding retained_intron MGP_LPJ_T0053118.1 MGP_LPJ_G0025405.1 mouse_genomes_project 2 23743338 23783732 + MGP_LPJ_P0053118 Kcnt1 protein_coding protein_coding MGP_LPJ_T0053119.1 MGP_LPJ_G0025405.1 mouse_genomes_project 2 23743346 23781576 + MGP_LPJ_P0053119 Kcnt1 protein_coding protein_coding MGP_LPJ_T0053120.1 MGP_LPJ_G0025405.1 mouse_genomes_project 2 23759807 23782051 + Kcnt1 protein_coding retained_intron MGP_LPJ_T0053121.1 MGP_LPJ_G0025405.1 mouse_genomes_project 2 23766355 23768860 + MGP_LPJ_P0053121 Kcnt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053122.1 MGP_LPJ_G0025405.1 mouse_genomes_project 2 23768966 23775368 + MGP_LPJ_P0053122 Kcnt1 protein_coding protein_coding MGP_LPJ_T0053123.1 MGP_LPJ_G0025405.1 mouse_genomes_project 2 23773521 23782382 + Kcnt1 protein_coding retained_intron MGP_LPJ_T0053124.1 MGP_LPJ_G0025405.1 mouse_genomes_project 2 23776352 23781699 + Kcnt1 protein_coding retained_intron MGP_LPJ_T0058533.1 MGP_LPJ_G0026691.1 mouse_genomes_project 2 161063091 161067428 + Spag4 protein_coding retained_intron MGP_LPJ_T0058534.1 MGP_LPJ_G0026691.1 mouse_genomes_project 2 161063114 161068558 + Spag4 protein_coding retained_intron MGP_LPJ_T0058535.1 MGP_LPJ_G0026691.1 mouse_genomes_project 2 161063143 161067151 + Spag4 protein_coding retained_intron MGP_LPJ_T0058536.1 MGP_LPJ_G0026691.1 mouse_genomes_project 2 161063160 161067428 + MGP_LPJ_P0058536 Spag4 protein_coding protein_coding MGP_LPJ_T0058537.1 MGP_LPJ_G0026691.1 mouse_genomes_project 2 161063353 161065252 + MGP_LPJ_P0058537 Spag4 protein_coding nonsense_mediated_decay MGP_LPJ_T0058538.1 MGP_LPJ_G0026691.1 mouse_genomes_project 2 161063469 161065459 + MGP_LPJ_P0058538 Spag4 protein_coding nonsense_mediated_decay MGP_LPJ_T0058539.1 MGP_LPJ_G0026691.1 mouse_genomes_project 2 161063658 161065967 + MGP_LPJ_P0058539 Spag4 protein_coding protein_coding MGP_LPJ_T0058540.1 MGP_LPJ_G0026691.1 mouse_genomes_project 2 161064652 161067305 + Spag4 protein_coding processed_transcript MGP_LPJ_T0054567.1 MGP_LPJ_G0025654.1 mouse_genomes_project 2 48733779 48896767 + MGP_LPJ_P0054567 Kif5c protein_coding protein_coding MGP_LPJ_T0054568.1 MGP_LPJ_G0025654.1 mouse_genomes_project 2 48818125 48850715 + MGP_LPJ_P0054568 Kif5c protein_coding protein_coding MGP_LPJ_T0054569.1 MGP_LPJ_G0025654.1 mouse_genomes_project 2 48843030 48856048 + Kif5c protein_coding processed_transcript MGP_LPJ_T0054570.1 MGP_LPJ_G0025654.1 mouse_genomes_project 2 48853074 48856039 + Kif5c protein_coding processed_transcript MGP_LPJ_T0054571.1 MGP_LPJ_G0025654.1 mouse_genomes_project 2 48864988 48877851 + Kif5c protein_coding processed_transcript MGP_LPJ_T0054572.1 MGP_LPJ_G0025654.1 mouse_genomes_project 2 48872653 48879372 + Kif5c protein_coding processed_transcript MGP_LPJ_T0003906.1 MGP_LPJ_G0003495.1 mouse_genomes_project 2 3539169 3543417 - Gm13388 antisense antisense MGP_LPJ_T0052819.1 MGP_LPJ_G0025345.1 mouse_genomes_project 2 22739299 22748237 + MGP_LPJ_P0052819 Zmynd19 protein_coding protein_coding MGP_LPJ_T0004002.1 MGP_LPJ_G0003570.1 mouse_genomes_project 2 66124565 66232391 + Gm13629 antisense antisense MGP_LPJ_T0004003.1 MGP_LPJ_G0003570.1 mouse_genomes_project 2 66124581 66197231 + Gm13629 antisense antisense MGP_LPJ_T0010448.1 MGP_LPJ_G0008566.1 mouse_genomes_project 2 85229296 85229360 - Mir130a miRNA miRNA MGP_LPJ_T0001112.1 MGP_LPJ_G0001037.1 mouse_genomes_project 2 68696861 68700090 + TEC TEC MGP_LPJ_T0013740.1 MGP_LPJ_G0011831.1 mouse_genomes_project 2 143925320 143925748 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010367.1 MGP_LPJ_G0008485.1 mouse_genomes_project 2 7747737 7747817 + miRNA miRNA MGP_LPJ_T0055739.1 MGP_LPJ_G0026010.1 mouse_genomes_project 2 90156907 90160883 + MGP_LPJ_P0055739 Olfr1206 protein_coding protein_coding MGP_LPJ_T0053821.1 MGP_LPJ_G0025516.1 mouse_genomes_project 2 29699862 29760734 + MGP_LPJ_P0053821 Ass1 protein_coding protein_coding MGP_LPJ_T0053822.1 MGP_LPJ_G0025516.1 mouse_genomes_project 2 29758806 29760848 + Ass1 protein_coding retained_intron MGP_LPJ_T0052237.1 MGP_LPJ_G0025246.1 mouse_genomes_project 2 1935147 1967880 + MGP_LPJ_P0052237 Sephs1 protein_coding protein_coding MGP_LPJ_T0052238.1 MGP_LPJ_G0025246.1 mouse_genomes_project 2 1935826 1965460 + MGP_LPJ_P0052238 Sephs1 protein_coding protein_coding MGP_LPJ_T0052239.1 MGP_LPJ_G0025246.1 mouse_genomes_project 2 1937638 1943224 + Sephs1 protein_coding processed_transcript MGP_LPJ_T0052240.1 MGP_LPJ_G0025246.1 mouse_genomes_project 2 1937965 1962856 + Sephs1 protein_coding processed_transcript MGP_LPJ_T0010447.1 MGP_LPJ_G0008565.1 mouse_genomes_project 2 77376832 77376914 - Gm44360 miRNA miRNA MGP_LPJ_T0010348.1 MGP_LPJ_G0008466.1 mouse_genomes_project 2 2694627 2694707 + Gm27506 miRNA miRNA MGP_LPJ_T0004128.1 MGP_LPJ_G0003653.1 mouse_genomes_project 2 147962500 148000273 - Pcsk2os2 antisense antisense MGP_LPJ_T0004129.1 MGP_LPJ_G0003653.1 mouse_genomes_project 2 147964081 148007044 - Pcsk2os2 antisense antisense MGP_LPJ_T0053999.1 MGP_LPJ_G0025542.1 mouse_genomes_project 2 30924396 30925897 - MGP_LPJ_P0053999 9430097D07Rik protein_coding protein_coding MGP_LPJ_T0003920.1 MGP_LPJ_G0003507.1 mouse_genomes_project 2 17000136 17005242 - Ptf1aos antisense antisense MGP_LPJ_T0059538.1 MGP_LPJ_G0026921.1 mouse_genomes_project 2 186683372 186686643 - Lama5 protein_coding processed_transcript MGP_LPJ_T0059539.1 MGP_LPJ_G0026921.1 mouse_genomes_project 2 186683372 186733675 - MGP_LPJ_P0059539 Lama5 protein_coding protein_coding MGP_LPJ_T0059540.1 MGP_LPJ_G0026921.1 mouse_genomes_project 2 186683453 186684587 - Lama5 protein_coding processed_transcript MGP_LPJ_T0059541.1 MGP_LPJ_G0026921.1 mouse_genomes_project 2 186684167 186685403 - Lama5 protein_coding processed_transcript MGP_LPJ_T0017725.1 MGP_LPJ_G0015338.1 mouse_genomes_project 2 56604800 56607082 - A930012O16Rik processed_transcript processed_transcript MGP_LPJ_T0017726.1 MGP_LPJ_G0015338.1 mouse_genomes_project 2 56604800 56607082 - A930012O16Rik processed_transcript processed_transcript MGP_LPJ_T0053841.1 MGP_LPJ_G0025520.1 mouse_genomes_project 2 29936731 29950066 + Abl1 protein_coding retained_intron MGP_LPJ_T0053842.1 MGP_LPJ_G0025520.1 mouse_genomes_project 2 29936892 29958782 + Abl1 protein_coding processed_transcript MGP_LPJ_T0053843.1 MGP_LPJ_G0025520.1 mouse_genomes_project 2 29936906 30056202 + MGP_LPJ_P0053843 Abl1 protein_coding protein_coding MGP_LPJ_T0053844.1 MGP_LPJ_G0025520.1 mouse_genomes_project 2 29936907 30053000 + MGP_LPJ_P0053844 Abl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053845.1 MGP_LPJ_G0025520.1 mouse_genomes_project 2 29937820 30030908 + MGP_LPJ_P0053845 Abl1 protein_coding protein_coding MGP_LPJ_T0053846.1 MGP_LPJ_G0025520.1 mouse_genomes_project 2 29937966 30031540 + MGP_LPJ_P0053846 Abl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053847.1 MGP_LPJ_G0025520.1 mouse_genomes_project 2 30012513 30056888 + MGP_LPJ_P0053847 Abl1 protein_coding protein_coding MGP_LPJ_T0053848.1 MGP_LPJ_G0025520.1 mouse_genomes_project 2 30012743 30031540 + MGP_LPJ_P0053848 Abl1 protein_coding protein_coding MGP_LPJ_T0053849.1 MGP_LPJ_G0025520.1 mouse_genomes_project 2 30042665 30047231 + Abl1 protein_coding retained_intron MGP_LPJ_T0053850.1 MGP_LPJ_G0025520.1 mouse_genomes_project 2 30049306 30050653 + Abl1 protein_coding retained_intron MGP_LPJ_T0057221.1 MGP_LPJ_G0026363.1 mouse_genomes_project 2 128541446 128553375 + MGP_LPJ_P0057221 Ctxn2 protein_coding protein_coding MGP_LPJ_T0102025.1 MGP_LPJ_G0040062.1 mouse_genomes_project 2 86153060 86153990 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0054336.1 MGP_LPJ_G0025601.1 mouse_genomes_project 2 35235169 35236105 + MGP_LPJ_P0054336 Olfr345 protein_coding protein_coding MGP_LPJ_T0052744.1 MGP_LPJ_G0025332.1 mouse_genomes_project 2 21709596 21757196 - MGP_LPJ_P0052744 Hnmt protein_coding protein_coding MGP_LPJ_T0052745.1 MGP_LPJ_G0025332.1 mouse_genomes_project 2 21709626 21756856 - MGP_LPJ_P0052745 Hnmt protein_coding protein_coding MGP_LPJ_T0052746.1 MGP_LPJ_G0025332.1 mouse_genomes_project 2 21710215 21756643 - MGP_LPJ_P0052746 Hnmt protein_coding protein_coding MGP_LPJ_T0102067.1 MGP_LPJ_G0040104.1 mouse_genomes_project 2 125720491 125720767 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0058690.1 MGP_LPJ_G0026713.1 mouse_genomes_project 2 162168597 162209715 - MGP_LPJ_P0058690 Samhd1 protein_coding protein_coding MGP_LPJ_T0058691.1 MGP_LPJ_G0026713.1 mouse_genomes_project 2 162170412 162209570 - MGP_LPJ_P0058691 Samhd1 protein_coding protein_coding MGP_LPJ_T0058692.1 MGP_LPJ_G0026713.1 mouse_genomes_project 2 162170412 162209543 - MGP_LPJ_P0058692 Samhd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0058693.1 MGP_LPJ_G0026713.1 mouse_genomes_project 2 162172371 162209672 - MGP_LPJ_P0058693 Samhd1 protein_coding protein_coding MGP_LPJ_T0058694.1 MGP_LPJ_G0026713.1 mouse_genomes_project 2 162172705 162183987 - Samhd1 protein_coding retained_intron MGP_LPJ_T0058695.1 MGP_LPJ_G0026713.1 mouse_genomes_project 2 162175458 162209656 - MGP_LPJ_P0058695 Samhd1 protein_coding protein_coding MGP_LPJ_T0058696.1 MGP_LPJ_G0026713.1 mouse_genomes_project 2 162182654 162183986 - Samhd1 protein_coding retained_intron MGP_LPJ_T0058697.1 MGP_LPJ_G0026713.1 mouse_genomes_project 2 162193691 162209387 - Samhd1 protein_coding retained_intron MGP_LPJ_T0058698.1 MGP_LPJ_G0026713.1 mouse_genomes_project 2 162195974 162204185 - Samhd1 protein_coding retained_intron MGP_LPJ_T0057915.1 MGP_LPJ_G0026527.1 mouse_genomes_project 2 148850054 148851367 + MGP_LPJ_P0057915 Gm561 protein_coding protein_coding MGP_LPJ_T0013495.1 MGP_LPJ_G0011586.1 mouse_genomes_project 2 49667332 49668196 - processed_pseudogene processed_pseudogene MGP_LPJ_T0052638.1 MGP_LPJ_G0025315.1 mouse_genomes_project 2 17236476 17239308 + MGP_LPJ_P0052638 Otud1 protein_coding protein_coding MGP_LPJ_T0007409.1 MGP_LPJ_G0006078.1 mouse_genomes_project 2 172182841 172186316 - Gm14267 lincRNA lincRNA MGP_LPJ_T0011508.1 MGP_LPJ_G0009626.1 mouse_genomes_project 2 34689526 34689669 - Gm27953 misc_RNA misc_RNA MGP_LPJ_T0056249.1 MGP_LPJ_G0026137.1 mouse_genomes_project 2 104733840 104870498 + MGP_LPJ_P0056249 Slc1a2 protein_coding protein_coding MGP_LPJ_T0056250.1 MGP_LPJ_G0026137.1 mouse_genomes_project 2 104734404 104815734 + Slc1a2 protein_coding processed_transcript MGP_LPJ_T0056251.1 MGP_LPJ_G0026137.1 mouse_genomes_project 2 104734439 104815731 + Slc1a2 protein_coding processed_transcript MGP_LPJ_T0056252.1 MGP_LPJ_G0026137.1 mouse_genomes_project 2 104734462 104857860 + MGP_LPJ_P0056252 Slc1a2 protein_coding protein_coding MGP_LPJ_T0056253.1 MGP_LPJ_G0026137.1 mouse_genomes_project 2 104751110 104815731 + Slc1a2 protein_coding processed_transcript MGP_LPJ_T0056254.1 MGP_LPJ_G0026137.1 mouse_genomes_project 2 104786152 104819648 + MGP_LPJ_P0056254 Slc1a2 protein_coding protein_coding MGP_LPJ_T0056255.1 MGP_LPJ_G0026137.1 mouse_genomes_project 2 104786234 104861496 + MGP_LPJ_P0056255 Slc1a2 protein_coding protein_coding MGP_LPJ_T0056256.1 MGP_LPJ_G0026137.1 mouse_genomes_project 2 104786234 104857869 + MGP_LPJ_P0056256 Slc1a2 protein_coding protein_coding MGP_LPJ_T0056257.1 MGP_LPJ_G0026137.1 mouse_genomes_project 2 104798754 104815727 + Slc1a2 protein_coding processed_transcript MGP_LPJ_T0056258.1 MGP_LPJ_G0026137.1 mouse_genomes_project 2 104835682 104857347 + MGP_LPJ_P0056258 Slc1a2 protein_coding protein_coding MGP_LPJ_T0056259.1 MGP_LPJ_G0026137.1 mouse_genomes_project 2 104840944 104861310 + MGP_LPJ_P0056259 Slc1a2 protein_coding protein_coding MGP_LPJ_T0099365.1 MGP_LPJ_G0037628.1 mouse_genomes_project 2 162837868 162837967 + Gm23463 snRNA snRNA MGP_LPJ_T0056506.1 MGP_LPJ_G0026193.1 mouse_genomes_project 2 113839777 113840689 - MGP_LPJ_P0056506 Olfr1277 protein_coding protein_coding MGP_LPJ_T0003988.1 MGP_LPJ_G0003559.1 mouse_genomes_project 2 57674092 57684705 + Gm13544 antisense antisense MGP_LPJ_T0010403.1 MGP_LPJ_G0008521.1 mouse_genomes_project 2 22860918 22860981 + Mir7664 miRNA miRNA MGP_LPJ_T0011513.1 MGP_LPJ_G0009631.1 mouse_genomes_project 2 44161724 44161925 + Vis1 misc_RNA misc_RNA MGP_LPJ_T0004165.1 MGP_LPJ_G0003686.1 mouse_genomes_project 2 168899632 168900199 + 2900093K20Rik antisense antisense MGP_LPJ_T0059195.1 MGP_LPJ_G0026836.1 mouse_genomes_project 2 172503403 172505263 + MGP_LPJ_P0059195 protein_coding protein_coding MGP_LPJ_T0059196.1 MGP_LPJ_G0026836.1 mouse_genomes_project 2 172504641 172510885 + MGP_LPJ_P0059196 protein_coding protein_coding MGP_LPJ_T0054333.1 MGP_LPJ_G0025598.1 mouse_genomes_project 2 35077474 35078416 - MGP_LPJ_P0054333 Olfr341 protein_coding protein_coding MGP_LPJ_T0055633.1 MGP_LPJ_G0025916.1 mouse_genomes_project 2 87572000 87574542 - MGP_LPJ_P0055633 Olfr1084 protein_coding protein_coding MGP_LPJ_T0013436.1 MGP_LPJ_G0011527.1 mouse_genomes_project 2 24459005 24459574 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013635.1 MGP_LPJ_G0011726.1 mouse_genomes_project 2 95656460 95657040 - processed_pseudogene processed_pseudogene MGP_LPJ_T0057233.1 MGP_LPJ_G0026368.1 mouse_genomes_project 2 128986584 129051817 - MGP_LPJ_P0057233 Cep152 protein_coding protein_coding MGP_LPJ_T0057234.1 MGP_LPJ_G0026368.1 mouse_genomes_project 2 128986896 129047953 - MGP_LPJ_P0057234 Cep152 protein_coding unknown_likely_coding MGP_LPJ_T0056540.1 MGP_LPJ_G0026224.1 mouse_genomes_project 2 114995043 115140731 + MGP_LPJ_P0056540 Gm21985 protein_coding nonsense_mediated_decay MGP_LPJ_T0057125.1 MGP_LPJ_G0026337.1 mouse_genomes_project 2 125169019 125171543 - MGP_LPJ_P0057125 protein_coding protein_coding MGP_LPJ_T0013511.1 MGP_LPJ_G0011602.1 mouse_genomes_project 2 54616569 54617595 + processed_pseudogene processed_pseudogene MGP_LPJ_T0054987.1 MGP_LPJ_G0025733.1 mouse_genomes_project 2 69501515 69517219 + MGP_LPJ_P0054987 Klhl41 protein_coding protein_coding MGP_LPJ_T0054469.1 MGP_LPJ_G0025643.1 mouse_genomes_project 2 37876701 37910599 - MGP_LPJ_P0054469 Ppp6c protein_coding protein_coding MGP_LPJ_T0054470.1 MGP_LPJ_G0025643.1 mouse_genomes_project 2 37879081 37910430 - MGP_LPJ_P0054470 Ppp6c protein_coding nonsense_mediated_decay MGP_LPJ_T0054471.1 MGP_LPJ_G0025643.1 mouse_genomes_project 2 37879124 37910468 - MGP_LPJ_P0054471 Ppp6c protein_coding protein_coding MGP_LPJ_T0054472.1 MGP_LPJ_G0025643.1 mouse_genomes_project 2 37879844 37883338 - Ppp6c protein_coding processed_transcript MGP_LPJ_T0013396.1 MGP_LPJ_G0011487.1 mouse_genomes_project 2 12129754 12130089 - processed_pseudogene processed_pseudogene MGP_LPJ_T0059658.1 MGP_LPJ_G0026946.1 mouse_genomes_project 2 187793784 187801527 - MGP_LPJ_P0059658 Srms protein_coding protein_coding MGP_LPJ_T0007422.1 MGP_LPJ_G0006088.1 mouse_genomes_project 2 174884417 174885056 + 1700017J07Rik lincRNA lincRNA MGP_LPJ_T0058355.1 MGP_LPJ_G0026656.1 mouse_genomes_project 2 159433213 159444379 - MGP_LPJ_P0058355 E2f1 protein_coding protein_coding MGP_LPJ_T0058356.1 MGP_LPJ_G0026656.1 mouse_genomes_project 2 159433440 159444207 - MGP_LPJ_P0058356 E2f1 protein_coding protein_coding MGP_LPJ_T0056773.1 MGP_LPJ_G0026283.1 mouse_genomes_project 2 122698933 122734278 + MGP_LPJ_P0056773 Nusap1 protein_coding protein_coding MGP_LPJ_T0056774.1 MGP_LPJ_G0026283.1 mouse_genomes_project 2 122699329 122718709 + Nusap1 protein_coding processed_transcript MGP_LPJ_T0056775.1 MGP_LPJ_G0026283.1 mouse_genomes_project 2 122699352 122735692 + MGP_LPJ_P0056775 Nusap1 protein_coding protein_coding MGP_LPJ_T0056776.1 MGP_LPJ_G0026283.1 mouse_genomes_project 2 122699364 122713335 + Nusap1 protein_coding processed_transcript MGP_LPJ_T0003960.1 MGP_LPJ_G0003537.1 mouse_genomes_project 2 30247217 30248075 - Gm13442 antisense antisense MGP_LPJ_T0058789.1 MGP_LPJ_G0026734.1 mouse_genomes_project 2 163850809 163953427 + Ppp1r16b protein_coding retained_intron MGP_LPJ_T0058790.1 MGP_LPJ_G0026734.1 mouse_genomes_project 2 163850809 163961760 + MGP_LPJ_P0058790 Ppp1r16b protein_coding protein_coding MGP_LPJ_T0058791.1 MGP_LPJ_G0026734.1 mouse_genomes_project 2 163852144 163961760 + MGP_LPJ_P0058791 Ppp1r16b protein_coding protein_coding MGP_LPJ_T0058792.1 MGP_LPJ_G0026734.1 mouse_genomes_project 2 163852530 163961760 + MGP_LPJ_P0058792 Ppp1r16b protein_coding protein_coding MGP_LPJ_T0058793.1 MGP_LPJ_G0026734.1 mouse_genomes_project 2 163884987 163961760 + MGP_LPJ_P0058793 Ppp1r16b protein_coding protein_coding MGP_LPJ_T0013397.1 MGP_LPJ_G0011488.1 mouse_genomes_project 2 12159644 12160635 + processed_pseudogene processed_pseudogene MGP_LPJ_T0052615.1 MGP_LPJ_G0025307.1 mouse_genomes_project 2 16225459 16234360 + Bmi1 protein_coding processed_transcript MGP_LPJ_T0052616.1 MGP_LPJ_G0025307.1 mouse_genomes_project 2 16225484 16236476 + MGP_LPJ_P0052616 Bmi1 protein_coding unknown_likely_coding MGP_LPJ_T0052617.1 MGP_LPJ_G0025307.1 mouse_genomes_project 2 16229810 16235671 + MGP_LPJ_P0052617 Bmi1 protein_coding protein_coding MGP_LPJ_T0052618.1 MGP_LPJ_G0025307.1 mouse_genomes_project 2 16232373 16236008 + MGP_LPJ_P0052618 Bmi1 protein_coding protein_coding MGP_LPJ_T0052619.1 MGP_LPJ_G0025307.1 mouse_genomes_project 2 16232988 16235025 + MGP_LPJ_P0052619 Bmi1 protein_coding protein_coding MGP_LPJ_T0052620.1 MGP_LPJ_G0025307.1 mouse_genomes_project 2 16233101 16234851 + MGP_LPJ_P0052620 Bmi1 protein_coding protein_coding MGP_LPJ_T0057854.1 MGP_LPJ_G0026512.1 mouse_genomes_project 2 147272389 147275630 + MGP_LPJ_P0057854 Otor protein_coding protein_coding MGP_LPJ_T0055539.1 MGP_LPJ_G0025850.1 mouse_genomes_project 2 85536733 85546449 + MGP_LPJ_P0055539 Ssrp1 protein_coding protein_coding MGP_LPJ_T0055540.1 MGP_LPJ_G0025850.1 mouse_genomes_project 2 85536950 85546446 + MGP_LPJ_P0055540 Ssrp1 protein_coding protein_coding MGP_LPJ_T0055541.1 MGP_LPJ_G0025850.1 mouse_genomes_project 2 85536952 85538588 + Ssrp1 protein_coding processed_transcript MGP_LPJ_T0055542.1 MGP_LPJ_G0025850.1 mouse_genomes_project 2 85536954 85545112 + MGP_LPJ_P0055542 Ssrp1 protein_coding protein_coding MGP_LPJ_T0055543.1 MGP_LPJ_G0025850.1 mouse_genomes_project 2 85537032 85539772 + Ssrp1 protein_coding processed_transcript MGP_LPJ_T0055544.1 MGP_LPJ_G0025850.1 mouse_genomes_project 2 85539428 85540339 + Ssrp1 protein_coding processed_transcript MGP_LPJ_T0055545.1 MGP_LPJ_G0025850.1 mouse_genomes_project 2 85540490 85541638 + Ssrp1 protein_coding processed_transcript MGP_LPJ_T0055546.1 MGP_LPJ_G0025850.1 mouse_genomes_project 2 85544590 85546058 + Ssrp1 protein_coding processed_transcript MGP_LPJ_T0055547.1 MGP_LPJ_G0025850.1 mouse_genomes_project 2 85544694 85545625 + Ssrp1 protein_coding processed_transcript MGP_LPJ_T0055454.1 MGP_LPJ_G0025829.1 mouse_genomes_project 2 84914316 84958442 - MGP_LPJ_P0055454 Tfpi protein_coding protein_coding MGP_LPJ_T0055455.1 MGP_LPJ_G0025829.1 mouse_genomes_project 2 84914316 84959937 - MGP_LPJ_P0055455 Tfpi protein_coding protein_coding MGP_LPJ_T0055456.1 MGP_LPJ_G0025829.1 mouse_genomes_project 2 84914321 84916174 - Tfpi protein_coding processed_transcript MGP_LPJ_T0055457.1 MGP_LPJ_G0025829.1 mouse_genomes_project 2 84914321 84958832 - MGP_LPJ_P0055457 Tfpi protein_coding protein_coding MGP_LPJ_T0055458.1 MGP_LPJ_G0025829.1 mouse_genomes_project 2 84921719 84961406 - MGP_LPJ_P0055458 Tfpi protein_coding protein_coding MGP_LPJ_T0055459.1 MGP_LPJ_G0025829.1 mouse_genomes_project 2 84921719 84961418 - MGP_LPJ_P0055459 Tfpi protein_coding protein_coding MGP_LPJ_T0055460.1 MGP_LPJ_G0025829.1 mouse_genomes_project 2 84921719 84961391 - MGP_LPJ_P0055460 Tfpi protein_coding protein_coding MGP_LPJ_T0055461.1 MGP_LPJ_G0025829.1 mouse_genomes_project 2 84921719 84942118 - MGP_LPJ_P0055461 Tfpi protein_coding protein_coding MGP_LPJ_T0055462.1 MGP_LPJ_G0025829.1 mouse_genomes_project 2 84922302 84958461 - MGP_LPJ_P0055462 Tfpi protein_coding protein_coding MGP_LPJ_T0055463.1 MGP_LPJ_G0025829.1 mouse_genomes_project 2 84925648 84958457 - Tfpi protein_coding processed_transcript MGP_LPJ_T0101303.1 MGP_LPJ_G0039524.1 mouse_genomes_project 2 22232080 22232666 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0004194.1 MGP_LPJ_G0003707.1 mouse_genomes_project 2 178114913 178118752 + Gm14271 antisense antisense MGP_LPJ_T0007441.1 MGP_LPJ_G0006104.1 mouse_genomes_project 2 178068319 178077702 - Gm14641 lincRNA lincRNA MGP_LPJ_T0056869.1 MGP_LPJ_G0026301.1 mouse_genomes_project 2 123478895 123526673 - MGP_LPJ_P0056869 Tmem87a protein_coding protein_coding MGP_LPJ_T0056870.1 MGP_LPJ_G0026301.1 mouse_genomes_project 2 123478895 123526693 - MGP_LPJ_P0056870 Tmem87a protein_coding protein_coding MGP_LPJ_T0056871.1 MGP_LPJ_G0026301.1 mouse_genomes_project 2 123478899 123526699 - Tmem87a protein_coding processed_transcript MGP_LPJ_T0056872.1 MGP_LPJ_G0026301.1 mouse_genomes_project 2 123479533 123526681 - Tmem87a protein_coding processed_transcript MGP_LPJ_T0056873.1 MGP_LPJ_G0026301.1 mouse_genomes_project 2 123486837 123526682 - MGP_LPJ_P0056873 Tmem87a protein_coding protein_coding MGP_LPJ_T0056874.1 MGP_LPJ_G0026301.1 mouse_genomes_project 2 123503393 123526717 - Tmem87a protein_coding processed_transcript MGP_LPJ_T0056875.1 MGP_LPJ_G0026301.1 mouse_genomes_project 2 123503898 123526685 - Tmem87a protein_coding retained_intron MGP_LPJ_T0010451.1 MGP_LPJ_G0008569.1 mouse_genomes_project 2 93805053 93805151 + Mir1955 miRNA miRNA MGP_LPJ_T0058395.1 MGP_LPJ_G0026667.1 mouse_genomes_project 2 160178621 160192568 + Dynlrb1 protein_coding processed_transcript MGP_LPJ_T0058396.1 MGP_LPJ_G0026667.1 mouse_genomes_project 2 160178623 160192573 + MGP_LPJ_P0058396 Dynlrb1 protein_coding protein_coding MGP_LPJ_T0058397.1 MGP_LPJ_G0026667.1 mouse_genomes_project 2 160178696 160192431 + MGP_LPJ_P0058397 Dynlrb1 protein_coding protein_coding MGP_LPJ_T0058398.1 MGP_LPJ_G0026667.1 mouse_genomes_project 2 160178899 160192376 + Dynlrb1 protein_coding processed_transcript MGP_LPJ_T0017752.1 MGP_LPJ_G0015357.1 mouse_genomes_project 2 92552416 92561751 - Gm13778 processed_transcript processed_transcript MGP_LPJ_T0017753.1 MGP_LPJ_G0015357.1 mouse_genomes_project 2 92552719 92561766 - Gm13778 processed_transcript processed_transcript MGP_LPJ_T0059393.1 MGP_LPJ_G0026885.1 mouse_genomes_project 2 179178652 179196313 + MGP_LPJ_P0059393 Rae1 protein_coding protein_coding MGP_LPJ_T0059394.1 MGP_LPJ_G0026885.1 mouse_genomes_project 2 179178659 179190009 + MGP_LPJ_P0059394 Rae1 protein_coding protein_coding MGP_LPJ_T0059395.1 MGP_LPJ_G0026885.1 mouse_genomes_project 2 179187194 179190008 + Rae1 protein_coding retained_intron MGP_LPJ_T0059396.1 MGP_LPJ_G0026885.1 mouse_genomes_project 2 179192224 179193383 + Rae1 protein_coding retained_intron MGP_LPJ_T0059397.1 MGP_LPJ_G0026885.1 mouse_genomes_project 2 179193022 179196001 + Rae1 protein_coding retained_intron MGP_LPJ_T0013816.1 MGP_LPJ_G0011907.1 mouse_genomes_project 2 168330291 168330981 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017822.1 MGP_LPJ_G0015389.1 mouse_genomes_project 2 135588619 135617759 - 5330413P13Rik processed_transcript processed_transcript MGP_LPJ_T0017823.1 MGP_LPJ_G0015389.1 mouse_genomes_project 2 135612069 135617764 - 5330413P13Rik processed_transcript processed_transcript MGP_LPJ_T0017824.1 MGP_LPJ_G0015389.1 mouse_genomes_project 2 135612286 135617727 - 5330413P13Rik processed_transcript processed_transcript MGP_LPJ_T0013486.1 MGP_LPJ_G0011577.1 mouse_genomes_project 2 47175832 47176265 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003989.1 MGP_LPJ_G0003560.1 mouse_genomes_project 2 59775534 59808414 + Gm13571 antisense antisense MGP_LPJ_T0003990.1 MGP_LPJ_G0003560.1 mouse_genomes_project 2 59792707 59801038 + Gm13571 antisense antisense MGP_LPJ_T0055564.1 MGP_LPJ_G0025858.1 mouse_genomes_project 2 85973371 85974484 - MGP_LPJ_P0055564 Olfr995 protein_coding protein_coding MGP_LPJ_T0058908.1 MGP_LPJ_G0026761.1 mouse_genomes_project 2 169083413 169099860 + MGP_LPJ_P0058908 Ttpal protein_coding protein_coding MGP_LPJ_T0058909.1 MGP_LPJ_G0026761.1 mouse_genomes_project 2 169083421 169097352 + MGP_LPJ_P0058909 Ttpal protein_coding protein_coding MGP_LPJ_T0058910.1 MGP_LPJ_G0026761.1 mouse_genomes_project 2 169083448 169093708 + Ttpal protein_coding retained_intron MGP_LPJ_T0058911.1 MGP_LPJ_G0026761.1 mouse_genomes_project 2 169083448 169088352 + MGP_LPJ_P0058911 Ttpal protein_coding protein_coding MGP_LPJ_T0058912.1 MGP_LPJ_G0026761.1 mouse_genomes_project 2 169083450 169099861 + MGP_LPJ_P0058912 Ttpal protein_coding nonsense_mediated_decay MGP_LPJ_T0058913.1 MGP_LPJ_G0026761.1 mouse_genomes_project 2 169083662 169092753 + MGP_LPJ_P0058913 Ttpal protein_coding protein_coding MGP_LPJ_T0058914.1 MGP_LPJ_G0026761.1 mouse_genomes_project 2 169092345 169096275 + Ttpal protein_coding retained_intron MGP_LPJ_T0057907.1 MGP_LPJ_G0026526.1 mouse_genomes_project 2 148810078 148824185 + MGP_LPJ_P0057907 Sec23b protein_coding protein_coding MGP_LPJ_T0057908.1 MGP_LPJ_G0026526.1 mouse_genomes_project 2 148810105 148846820 + MGP_LPJ_P0057908 Sec23b protein_coding protein_coding MGP_LPJ_T0057909.1 MGP_LPJ_G0026526.1 mouse_genomes_project 2 148810130 148813473 + MGP_LPJ_P0057909 Sec23b protein_coding protein_coding MGP_LPJ_T0057910.1 MGP_LPJ_G0026526.1 mouse_genomes_project 2 148810161 148813581 + Sec23b protein_coding processed_transcript MGP_LPJ_T0057911.1 MGP_LPJ_G0026526.1 mouse_genomes_project 2 148810168 148822975 + MGP_LPJ_P0057911 Sec23b protein_coding protein_coding MGP_LPJ_T0057912.1 MGP_LPJ_G0026526.1 mouse_genomes_project 2 148810183 148820824 + MGP_LPJ_P0057912 Sec23b protein_coding protein_coding MGP_LPJ_T0057913.1 MGP_LPJ_G0026526.1 mouse_genomes_project 2 148821070 148846820 + Sec23b protein_coding processed_transcript MGP_LPJ_T0057914.1 MGP_LPJ_G0026526.1 mouse_genomes_project 2 148833309 148837188 + Sec23b protein_coding processed_transcript MGP_LPJ_T0052750.1 MGP_LPJ_G0025335.1 mouse_genomes_project 2 21934058 21948772 + MGP_LPJ_P0052750 Il1f6 protein_coding protein_coding MGP_LPJ_T0052751.1 MGP_LPJ_G0025335.1 mouse_genomes_project 2 21934145 21948595 + Il1f6 protein_coding processed_transcript MGP_LPJ_T0052510.1 MGP_LPJ_G0025289.1 mouse_genomes_project 2 11453756 11483604 - MGP_LPJ_P0052510 Hacd1 protein_coding protein_coding MGP_LPJ_T0007308.1 MGP_LPJ_G0005996.1 mouse_genomes_project 2 117987729 117989966 + Gm28493 lincRNA lincRNA MGP_LPJ_T0013483.1 MGP_LPJ_G0011574.1 mouse_genomes_project 2 44558984 44559397 + processed_pseudogene processed_pseudogene MGP_LPJ_T0054884.1 MGP_LPJ_G0025710.1 mouse_genomes_project 2 65081546 65176203 - MGP_LPJ_P0054884 protein_coding unknown_likely_coding MGP_LPJ_T0054885.1 MGP_LPJ_G0025710.1 mouse_genomes_project 2 65130719 65137333 - protein_coding processed_transcript MGP_LPJ_T0054886.1 MGP_LPJ_G0025710.1 mouse_genomes_project 2 65164276 65168931 - MGP_LPJ_P0054886 protein_coding protein_coding MGP_LPJ_T0003937.1 MGP_LPJ_G0003520.1 mouse_genomes_project 2 24093814 24096395 + Gm27196 antisense antisense MGP_LPJ_T0054651.1 MGP_LPJ_G0025670.1 mouse_genomes_project 2 52484878 52515468 + Arl6ip6 protein_coding processed_transcript MGP_LPJ_T0054652.1 MGP_LPJ_G0025670.1 mouse_genomes_project 2 52485240 52517154 + MGP_LPJ_P0054652 Arl6ip6 protein_coding protein_coding MGP_LPJ_T0057158.1 MGP_LPJ_G0026350.1 mouse_genomes_project 2 125562533 125595344 + MGP_LPJ_P0057158 protein_coding protein_coding MGP_LPJ_T0054077.1 MGP_LPJ_G0025556.1 mouse_genomes_project 2 31154592 31220483 - MGP_LPJ_P0054077 Stxbp1 protein_coding protein_coding MGP_LPJ_T0054078.1 MGP_LPJ_G0025556.1 mouse_genomes_project 2 31154597 31185534 - Stxbp1 protein_coding processed_transcript MGP_LPJ_T0054079.1 MGP_LPJ_G0025556.1 mouse_genomes_project 2 31154951 31220440 - MGP_LPJ_P0054079 Stxbp1 protein_coding protein_coding MGP_LPJ_T0054080.1 MGP_LPJ_G0025556.1 mouse_genomes_project 2 31184857 31185940 - Stxbp1 protein_coding retained_intron MGP_LPJ_T0054812.1 MGP_LPJ_G0025698.1 mouse_genomes_project 2 61306708 61308333 + Tbr1 protein_coding processed_transcript MGP_LPJ_T0054813.1 MGP_LPJ_G0025698.1 mouse_genomes_project 2 61308227 61317878 + MGP_LPJ_P0054813 Tbr1 protein_coding protein_coding MGP_LPJ_T0054814.1 MGP_LPJ_G0025698.1 mouse_genomes_project 2 61310036 61316295 + MGP_LPJ_P0054814 Tbr1 protein_coding protein_coding MGP_LPJ_T0054815.1 MGP_LPJ_G0025698.1 mouse_genomes_project 2 61310047 61315565 + Tbr1 protein_coding processed_transcript MGP_LPJ_T0013832.1 MGP_LPJ_G0011923.1 mouse_genomes_project 2 178177230 178177845 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007388.1 MGP_LPJ_G0006058.1 mouse_genomes_project 2 162701607 162703345 - Platr27 lincRNA lincRNA MGP_LPJ_T0057814.1 MGP_LPJ_G0026503.1 mouse_genomes_project 2 143893591 144139361 - MGP_LPJ_P0057814 Tasp1 protein_coding protein_coding MGP_LPJ_T0057815.1 MGP_LPJ_G0026503.1 mouse_genomes_project 2 143893591 144139336 - MGP_LPJ_P0057815 Tasp1 protein_coding protein_coding MGP_LPJ_T0057816.1 MGP_LPJ_G0026503.1 mouse_genomes_project 2 143893591 144139381 - MGP_LPJ_P0057816 Tasp1 protein_coding protein_coding MGP_LPJ_T0057817.1 MGP_LPJ_G0026503.1 mouse_genomes_project 2 144036390 144111416 - Tasp1 protein_coding retained_intron MGP_LPJ_T0054756.1 MGP_LPJ_G0025690.1 mouse_genomes_project 2 59642736 59681993 + MGP_LPJ_P0054756 March7 protein_coding protein_coding MGP_LPJ_T0054757.1 MGP_LPJ_G0025690.1 mouse_genomes_project 2 59642762 59683458 + March7 protein_coding processed_transcript MGP_LPJ_T0054758.1 MGP_LPJ_G0025690.1 mouse_genomes_project 2 59642922 59680755 + MGP_LPJ_P0054758 March7 protein_coding protein_coding MGP_LPJ_T0054759.1 MGP_LPJ_G0025690.1 mouse_genomes_project 2 59657536 59680738 + MGP_LPJ_P0054759 March7 protein_coding protein_coding MGP_LPJ_T0054760.1 MGP_LPJ_G0025690.1 mouse_genomes_project 2 59664879 59667168 + March7 protein_coding processed_transcript MGP_LPJ_T0054761.1 MGP_LPJ_G0025690.1 mouse_genomes_project 2 59669537 59680738 + MGP_LPJ_P0054761 March7 protein_coding protein_coding MGP_LPJ_T0054762.1 MGP_LPJ_G0025690.1 mouse_genomes_project 2 59669671 59675917 + March7 protein_coding processed_transcript MGP_LPJ_T0054763.1 MGP_LPJ_G0025690.1 mouse_genomes_project 2 59675852 59680736 + March7 protein_coding processed_transcript MGP_LPJ_T0054764.1 MGP_LPJ_G0025690.1 mouse_genomes_project 2 59680123 59680738 + March7 protein_coding processed_transcript MGP_LPJ_T0057414.1 MGP_LPJ_G0026411.1 mouse_genomes_project 2 132164960 132167243 + MGP_LPJ_P0057414 protein_coding protein_coding MGP_LPJ_T0057415.1 MGP_LPJ_G0026411.1 mouse_genomes_project 2 132165023 132172792 + MGP_LPJ_P0057415 protein_coding nonsense_mediated_decay MGP_LPJ_T0057416.1 MGP_LPJ_G0026411.1 mouse_genomes_project 2 132167563 132170220 + MGP_LPJ_P0057416 protein_coding protein_coding MGP_LPJ_T0058344.1 MGP_LPJ_G0026653.1 mouse_genomes_project 2 159417890 159432658 - MGP_LPJ_P0058344 Necab3 protein_coding protein_coding MGP_LPJ_T0058345.1 MGP_LPJ_G0026653.1 mouse_genomes_project 2 159417890 159432673 - MGP_LPJ_P0058345 Necab3 protein_coding protein_coding MGP_LPJ_T0058346.1 MGP_LPJ_G0026653.1 mouse_genomes_project 2 159418536 159420286 - Necab3 protein_coding retained_intron MGP_LPJ_T0058347.1 MGP_LPJ_G0026653.1 mouse_genomes_project 2 159420537 159432697 - MGP_LPJ_P0058347 Necab3 protein_coding protein_coding MGP_LPJ_T0058349.1 MGP_LPJ_G0026653.1 mouse_genomes_project 2 159420632 159432651 - Necab3 protein_coding processed_transcript MGP_LPJ_T0058353.1 MGP_LPJ_G0026653.1 mouse_genomes_project 2 159428099 159432659 - Necab3 protein_coding retained_intron MGP_LPJ_T0058354.1 MGP_LPJ_G0026653.1 mouse_genomes_project 2 159428477 159431086 - Necab3 protein_coding retained_intron MGP_LPJ_T0013709.1 MGP_LPJ_G0011800.1 mouse_genomes_project 2 131106111 131106961 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102069.1 MGP_LPJ_G0040106.1 mouse_genomes_project 2 142881446 142882031 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013501.1 MGP_LPJ_G0011592.1 mouse_genomes_project 2 50992377 50993042 - processed_pseudogene processed_pseudogene MGP_LPJ_T0052408.1 MGP_LPJ_G0025275.1 mouse_genomes_project 2 8959451 8960110 - MGP_LPJ_P0052408 Gm17490 protein_coding protein_coding MGP_LPJ_T0001136.1 MGP_LPJ_G0001060.1 mouse_genomes_project 2 175944261 175945434 - TEC TEC MGP_LPJ_T0001137.1 MGP_LPJ_G0001060.1 mouse_genomes_project 2 175944374 175945234 - TEC TEC MGP_LPJ_T0057749.1 MGP_LPJ_G0026488.1 mouse_genomes_project 2 137440578 137451631 + MGP_LPJ_P0057749 Bmp2 protein_coding protein_coding MGP_LPJ_T0010392.1 MGP_LPJ_G0008510.1 mouse_genomes_project 2 7789961 7790088 + Mir669i miRNA miRNA MGP_LPJ_T0057978.1 MGP_LPJ_G0026539.1 mouse_genomes_project 2 151474610 151476740 - MGP_LPJ_P0057978 Nkx2-4 protein_coding protein_coding MGP_LPJ_T0007435.1 MGP_LPJ_G0006099.1 mouse_genomes_project 2 176669274 176679656 - Gm14264 lincRNA lincRNA MGP_LPJ_T0055614.1 MGP_LPJ_G0025898.1 mouse_genomes_project 2 87003774 87004718 - MGP_LPJ_P0055614 Olfr1046 protein_coding protein_coding MGP_LPJ_T0013471.1 MGP_LPJ_G0011562.1 mouse_genomes_project 2 38221138 38221621 - processed_pseudogene processed_pseudogene MGP_LPJ_T0058932.1 MGP_LPJ_G0026767.1 mouse_genomes_project 2 169335233 169399696 - MGP_LPJ_P0058932 Rims4 protein_coding protein_coding MGP_LPJ_T0058863.1 MGP_LPJ_G0026749.1 mouse_genomes_project 2 168374001 168404721 + L3mbtl1 protein_coding retained_intron MGP_LPJ_T0058864.1 MGP_LPJ_G0026749.1 mouse_genomes_project 2 168374003 168407171 + MGP_LPJ_P0058864 L3mbtl1 protein_coding protein_coding MGP_LPJ_T0058865.1 MGP_LPJ_G0026749.1 mouse_genomes_project 2 168374004 168380054 + L3mbtl1 protein_coding processed_transcript MGP_LPJ_T0058866.1 MGP_LPJ_G0026749.1 mouse_genomes_project 2 168374004 168380054 + MGP_LPJ_P0058866 L3mbtl1 protein_coding protein_coding MGP_LPJ_T0058867.1 MGP_LPJ_G0026749.1 mouse_genomes_project 2 168374029 168378412 + L3mbtl1 protein_coding processed_transcript MGP_LPJ_T0058868.1 MGP_LPJ_G0026749.1 mouse_genomes_project 2 168379171 168380718 + L3mbtl1 protein_coding processed_transcript MGP_LPJ_T0058869.1 MGP_LPJ_G0026749.1 mouse_genomes_project 2 168379171 168380718 + MGP_LPJ_P0058869 L3mbtl1 protein_coding protein_coding MGP_LPJ_T0055294.1 MGP_LPJ_G0025801.1 mouse_genomes_project 2 76954016 76975584 + MGP_LPJ_P0055294 Plekha3 protein_coding protein_coding MGP_LPJ_T0055295.1 MGP_LPJ_G0025801.1 mouse_genomes_project 2 76968602 76971520 + Plekha3 protein_coding processed_transcript MGP_LPJ_T0054908.1 MGP_LPJ_G0025714.1 mouse_genomes_project 2 65853852 65930942 - MGP_LPJ_P0054908 Ttc21b protein_coding protein_coding MGP_LPJ_T0054909.1 MGP_LPJ_G0025714.1 mouse_genomes_project 2 65890097 65908612 - Ttc21b protein_coding retained_intron MGP_LPJ_T0054910.1 MGP_LPJ_G0025714.1 mouse_genomes_project 2 65904589 65923818 - Ttc21b protein_coding retained_intron MGP_LPJ_T0004185.1 MGP_LPJ_G0003698.1 mouse_genomes_project 2 171506054 171509609 + antisense antisense MGP_LPJ_T0102026.1 MGP_LPJ_G0040063.1 mouse_genomes_project 2 86194885 86195830 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0099310.1 MGP_LPJ_G0037573.1 mouse_genomes_project 2 262104 262245 - Gm22005 snRNA snRNA MGP_LPJ_T0001055.1 MGP_LPJ_G0000980.1 mouse_genomes_project 2 8303433 8303544 - TEC TEC MGP_LPJ_T0057330.1 MGP_LPJ_G0026388.1 mouse_genomes_project 2 130648853 130653536 - MGP_LPJ_P0057330 Itpripl1 protein_coding protein_coding MGP_LPJ_T0057331.1 MGP_LPJ_G0026388.1 mouse_genomes_project 2 130650502 130653400 - MGP_LPJ_P0057331 Itpripl1 protein_coding protein_coding MGP_LPJ_T0057332.1 MGP_LPJ_G0026388.1 mouse_genomes_project 2 130650622 130652684 - MGP_LPJ_P0057332 Itpripl1 protein_coding protein_coding MGP_LPJ_T0055623.1 MGP_LPJ_G0025907.1 mouse_genomes_project 2 87198717 87201084 - MGP_LPJ_P0055623 protein_coding protein_coding MGP_LPJ_T0057880.1 MGP_LPJ_G0026520.1 mouse_genomes_project 2 148544472 148571017 - MGP_LPJ_P0057880 Ovol2 protein_coding protein_coding MGP_LPJ_T0057881.1 MGP_LPJ_G0026520.1 mouse_genomes_project 2 148544472 148571468 - MGP_LPJ_P0057881 Ovol2 protein_coding protein_coding MGP_LPJ_T0057882.1 MGP_LPJ_G0026520.1 mouse_genomes_project 2 148557107 148570647 - Ovol2 protein_coding processed_transcript MGP_LPJ_T0004189.1 MGP_LPJ_G0003702.1 mouse_genomes_project 2 173818923 173819901 + Gm14236 antisense antisense MGP_LPJ_T0052368.1 MGP_LPJ_G0025271.1 mouse_genomes_project 2 7613212 7697480 + MGP_LPJ_P0052368 Sfmbt2 protein_coding protein_coding MGP_LPJ_T0052369.1 MGP_LPJ_G0025271.1 mouse_genomes_project 2 7613213 7697480 + MGP_LPJ_P0052369 Sfmbt2 protein_coding protein_coding MGP_LPJ_T0052370.1 MGP_LPJ_G0025271.1 mouse_genomes_project 2 7613220 7659868 + Sfmbt2 protein_coding processed_transcript MGP_LPJ_T0052371.1 MGP_LPJ_G0025271.1 mouse_genomes_project 2 7615085 7697480 + MGP_LPJ_P0052371 Sfmbt2 protein_coding protein_coding MGP_LPJ_T0052372.1 MGP_LPJ_G0025271.1 mouse_genomes_project 2 7615085 7868185 + MGP_LPJ_P0052372 Sfmbt2 protein_coding protein_coding MGP_LPJ_T0052373.1 MGP_LPJ_G0025271.1 mouse_genomes_project 2 7615097 7648680 + Sfmbt2 protein_coding processed_transcript MGP_LPJ_T0052374.1 MGP_LPJ_G0025271.1 mouse_genomes_project 2 7615099 7868197 + MGP_LPJ_P0052374 Sfmbt2 protein_coding protein_coding MGP_LPJ_T0059673.1 MGP_LPJ_G0026951.1 mouse_genomes_project 2 187928761 187969557 + MGP_LPJ_P0059673 Rtel1 protein_coding protein_coding MGP_LPJ_T0059674.1 MGP_LPJ_G0026951.1 mouse_genomes_project 2 187928775 187960399 + Rtel1 protein_coding retained_intron MGP_LPJ_T0059675.1 MGP_LPJ_G0026951.1 mouse_genomes_project 2 187928784 187969519 + Rtel1 protein_coding retained_intron MGP_LPJ_T0059676.1 MGP_LPJ_G0026951.1 mouse_genomes_project 2 187928784 187969557 + MGP_LPJ_P0059676 Rtel1 protein_coding protein_coding MGP_LPJ_T0059677.1 MGP_LPJ_G0026951.1 mouse_genomes_project 2 187928807 187969519 + MGP_LPJ_P0059677 Rtel1 protein_coding protein_coding MGP_LPJ_T0059678.1 MGP_LPJ_G0026951.1 mouse_genomes_project 2 187928807 187969557 + MGP_LPJ_P0059678 Rtel1 protein_coding protein_coding MGP_LPJ_T0059679.1 MGP_LPJ_G0026951.1 mouse_genomes_project 2 187928807 187969557 + MGP_LPJ_P0059679 Rtel1 protein_coding protein_coding MGP_LPJ_T0059680.1 MGP_LPJ_G0026951.1 mouse_genomes_project 2 187928819 187969564 + MGP_LPJ_P0059680 Rtel1 protein_coding unknown_likely_coding MGP_LPJ_T0059681.1 MGP_LPJ_G0026951.1 mouse_genomes_project 2 187928985 187932828 + MGP_LPJ_P0059681 Rtel1 protein_coding protein_coding MGP_LPJ_T0059682.1 MGP_LPJ_G0026951.1 mouse_genomes_project 2 187937750 187969557 + MGP_LPJ_P0059682 Rtel1 protein_coding protein_coding MGP_LPJ_T0059683.1 MGP_LPJ_G0026951.1 mouse_genomes_project 2 187946968 187959989 + MGP_LPJ_P0059683 Rtel1 protein_coding nonsense_mediated_decay MGP_LPJ_T0059684.1 MGP_LPJ_G0026951.1 mouse_genomes_project 2 187950183 187959972 + Rtel1 protein_coding retained_intron MGP_LPJ_T0059685.1 MGP_LPJ_G0026951.1 mouse_genomes_project 2 187962395 187962896 + Rtel1 protein_coding retained_intron MGP_LPJ_T0059686.1 MGP_LPJ_G0026951.1 mouse_genomes_project 2 187962958 187965004 + Rtel1 protein_coding retained_intron MGP_LPJ_T0059687.1 MGP_LPJ_G0026951.1 mouse_genomes_project 2 187963068 187964096 + Rtel1 protein_coding retained_intron MGP_LPJ_T0059688.1 MGP_LPJ_G0026951.1 mouse_genomes_project 2 187965022 187968493 + Rtel1 protein_coding retained_intron MGP_LPJ_T0059689.1 MGP_LPJ_G0026951.1 mouse_genomes_project 2 187967340 187968754 + Rtel1 protein_coding processed_transcript MGP_LPJ_T0059690.1 MGP_LPJ_G0026951.1 mouse_genomes_project 2 187968143 187968958 + Rtel1 protein_coding retained_intron MGP_LPJ_T0059691.1 MGP_LPJ_G0026951.1 mouse_genomes_project 2 187968634 187969556 + Rtel1 protein_coding processed_transcript MGP_LPJ_T0059692.1 MGP_LPJ_G0026951.1 mouse_genomes_project 2 187968705 187969555 + MGP_LPJ_P0059692 Rtel1 protein_coding protein_coding MGP_LPJ_T0059693.1 MGP_LPJ_G0026951.1 mouse_genomes_project 2 187968910 187969557 + MGP_LPJ_P0059693 Rtel1 protein_coding protein_coding MGP_LPJ_T0059694.1 MGP_LPJ_G0026951.1 mouse_genomes_project 2 187968910 187969557 + MGP_LPJ_P0059694 Rtel1 protein_coding protein_coding MGP_LPJ_T0017815.1 MGP_LPJ_G0015384.1 mouse_genomes_project 2 132828493 132849981 - 9830144P21Rik processed_transcript processed_transcript MGP_LPJ_T0017816.1 MGP_LPJ_G0015384.1 mouse_genomes_project 2 132847726 132853879 - 9830144P21Rik processed_transcript processed_transcript MGP_LPJ_T0055752.1 MGP_LPJ_G0026021.1 mouse_genomes_project 2 90413348 90414284 - MGP_LPJ_P0055752 Olfr1220 protein_coding protein_coding MGP_LPJ_T0058658.1 MGP_LPJ_G0026705.1 mouse_genomes_project 2 161888186 161903697 + MGP_LPJ_P0058658 Tgif2 protein_coding protein_coding MGP_LPJ_T0058659.1 MGP_LPJ_G0026705.1 mouse_genomes_project 2 161888279 161903697 + MGP_LPJ_P0058659 Tgif2 protein_coding protein_coding MGP_LPJ_T0058660.1 MGP_LPJ_G0026705.1 mouse_genomes_project 2 161889187 161895830 + MGP_LPJ_P0058660 Tgif2 protein_coding nonsense_mediated_decay MGP_LPJ_T0058661.1 MGP_LPJ_G0026705.1 mouse_genomes_project 2 161898109 161901337 + Tgif2 protein_coding processed_transcript MGP_LPJ_T0058662.1 MGP_LPJ_G0026705.1 mouse_genomes_project 2 161898989 161901691 + Tgif2 protein_coding processed_transcript MGP_LPJ_T0058498.1 MGP_LPJ_G0026687.1 mouse_genomes_project 2 160954298 160985699 + Cep250 protein_coding retained_intron MGP_LPJ_T0058499.1 MGP_LPJ_G0026687.1 mouse_genomes_project 2 160954403 160998014 + MGP_LPJ_P0058499 Cep250 protein_coding protein_coding MGP_LPJ_T0058500.1 MGP_LPJ_G0026687.1 mouse_genomes_project 2 160954403 160998014 + MGP_LPJ_P0058500 Cep250 protein_coding protein_coding MGP_LPJ_T0058501.1 MGP_LPJ_G0026687.1 mouse_genomes_project 2 160954403 160998014 + MGP_LPJ_P0058501 Cep250 protein_coding protein_coding MGP_LPJ_T0058502.1 MGP_LPJ_G0026687.1 mouse_genomes_project 2 160954417 160972387 + MGP_LPJ_P0058502 Cep250 protein_coding protein_coding MGP_LPJ_T0058503.1 MGP_LPJ_G0026687.1 mouse_genomes_project 2 160954439 160965450 + MGP_LPJ_P0058503 Cep250 protein_coding protein_coding MGP_LPJ_T0058505.1 MGP_LPJ_G0026687.1 mouse_genomes_project 2 160974319 160998014 + Cep250 protein_coding retained_intron MGP_LPJ_T0058506.1 MGP_LPJ_G0026687.1 mouse_genomes_project 2 160977459 160979349 + Cep250 protein_coding retained_intron MGP_LPJ_T0058507.1 MGP_LPJ_G0026687.1 mouse_genomes_project 2 160984968 160988679 + MGP_LPJ_P0058507 Cep250 protein_coding protein_coding MGP_LPJ_T0058508.1 MGP_LPJ_G0026687.1 mouse_genomes_project 2 160985000 160989672 + MGP_LPJ_P0058508 Cep250 protein_coding nonsense_mediated_decay MGP_LPJ_T0013607.1 MGP_LPJ_G0011698.1 mouse_genomes_project 2 88170675 88172338 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013583.1 MGP_LPJ_G0011674.1 mouse_genomes_project 2 79539661 79540224 - processed_pseudogene processed_pseudogene MGP_LPJ_T0058958.1 MGP_LPJ_G0026778.1 mouse_genomes_project 2 169749287 169751569 - MGP_LPJ_P0058958 protein_coding protein_coding MGP_LPJ_T0055758.1 MGP_LPJ_G0026026.1 mouse_genomes_project 2 90494259 90495195 - MGP_LPJ_P0055758 Olfr1225 protein_coding protein_coding MGP_LPJ_T0059364.1 MGP_LPJ_G0026874.1 mouse_genomes_project 2 178344017 178346640 + MGP_LPJ_P0059364 Mc3r protein_coding protein_coding MGP_LPJ_T0013716.1 MGP_LPJ_G0011807.1 mouse_genomes_project 2 132990017 132990118 - processed_pseudogene processed_pseudogene MGP_LPJ_T0053106.1 MGP_LPJ_G0025402.1 mouse_genomes_project 2 23650855 23671997 - MGP_LPJ_P0053106 Glt6d1 protein_coding protein_coding MGP_LPJ_T0053107.1 MGP_LPJ_G0025402.1 mouse_genomes_project 2 23652210 23671980 - Glt6d1 protein_coding processed_transcript MGP_LPJ_T0102031.1 MGP_LPJ_G0040068.1 mouse_genomes_project 2 86869460 86870385 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0058897.1 MGP_LPJ_G0026757.1 mouse_genomes_project 2 168919229 168936096 + MGP_LPJ_P0058897 Gdap1l1 protein_coding protein_coding MGP_LPJ_T0058898.1 MGP_LPJ_G0026757.1 mouse_genomes_project 2 168919231 168935747 + MGP_LPJ_P0058898 Gdap1l1 protein_coding protein_coding MGP_LPJ_T0058899.1 MGP_LPJ_G0026757.1 mouse_genomes_project 2 168919231 168934727 + MGP_LPJ_P0058899 Gdap1l1 protein_coding protein_coding MGP_LPJ_T0058900.1 MGP_LPJ_G0026757.1 mouse_genomes_project 2 168919286 168934569 + MGP_LPJ_P0058900 Gdap1l1 protein_coding protein_coding MGP_LPJ_T0013423.1 MGP_LPJ_G0011514.1 mouse_genomes_project 2 20430759 20431094 - processed_pseudogene processed_pseudogene MGP_LPJ_T0059505.1 MGP_LPJ_G0026915.1 mouse_genomes_project 2 186521777 186522789 - Psma7 protein_coding retained_intron MGP_LPJ_T0059506.1 MGP_LPJ_G0026915.1 mouse_genomes_project 2 186521778 186527756 - Psma7 protein_coding retained_intron MGP_LPJ_T0059507.1 MGP_LPJ_G0026915.1 mouse_genomes_project 2 186521778 186527794 - MGP_LPJ_P0059507 Psma7 protein_coding protein_coding MGP_LPJ_T0059508.1 MGP_LPJ_G0026915.1 mouse_genomes_project 2 186522223 186522893 - Psma7 protein_coding retained_intron MGP_LPJ_T0059509.1 MGP_LPJ_G0026915.1 mouse_genomes_project 2 186523412 186525489 - Psma7 protein_coding retained_intron MGP_LPJ_T0059510.1 MGP_LPJ_G0026915.1 mouse_genomes_project 2 186524639 186527746 - Psma7 protein_coding processed_transcript MGP_LPJ_T0057619.1 MGP_LPJ_G0026461.1 mouse_genomes_project 2 134887631 134902182 - MGP_LPJ_P0057619 1700037H04Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0057620.1 MGP_LPJ_G0026461.1 mouse_genomes_project 2 134887632 134890336 - 1700037H04Rik protein_coding retained_intron MGP_LPJ_T0057621.1 MGP_LPJ_G0026461.1 mouse_genomes_project 2 134887632 134902168 - MGP_LPJ_P0057621 1700037H04Rik protein_coding protein_coding MGP_LPJ_T0057622.1 MGP_LPJ_G0026461.1 mouse_genomes_project 2 134888101 134902172 - MGP_LPJ_P0057622 1700037H04Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0057623.1 MGP_LPJ_G0026461.1 mouse_genomes_project 2 134888111 134902229 - MGP_LPJ_P0057623 1700037H04Rik protein_coding protein_coding MGP_LPJ_T0057624.1 MGP_LPJ_G0026461.1 mouse_genomes_project 2 134888468 134902190 - MGP_LPJ_P0057624 1700037H04Rik protein_coding protein_coding MGP_LPJ_T0057625.1 MGP_LPJ_G0026461.1 mouse_genomes_project 2 134889588 134902190 - 1700037H04Rik protein_coding processed_transcript MGP_LPJ_T0056481.1 MGP_LPJ_G0026182.1 mouse_genomes_project 2 112560614 112587209 + MGP_LPJ_P0056481 Ccdc34 protein_coding protein_coding MGP_LPJ_T0056482.1 MGP_LPJ_G0026182.1 mouse_genomes_project 2 112560759 112704933 + MGP_LPJ_P0056482 Ccdc34 protein_coding protein_coding MGP_LPJ_T0056483.1 MGP_LPJ_G0026182.1 mouse_genomes_project 2 112560777 112587215 + MGP_LPJ_P0056483 Ccdc34 protein_coding nonsense_mediated_decay MGP_LPJ_T0056484.1 MGP_LPJ_G0026182.1 mouse_genomes_project 2 112564770 112583156 + Ccdc34 protein_coding retained_intron MGP_LPJ_T0056485.1 MGP_LPJ_G0026182.1 mouse_genomes_project 2 112579919 112586742 + Ccdc34 protein_coding retained_intron MGP_LPJ_T0056486.1 MGP_LPJ_G0026182.1 mouse_genomes_project 2 112582787 112586557 + Ccdc34 protein_coding retained_intron MGP_LPJ_T0055714.1 MGP_LPJ_G0025986.1 mouse_genomes_project 2 89555274 89556222 + MGP_LPJ_P0055714 Olfr1176 protein_coding protein_coding MGP_LPJ_T0052936.1 MGP_LPJ_G0025368.1 mouse_genomes_project 2 23102324 23103590 + MGP_LPJ_P0052936 Lrrc26 protein_coding protein_coding MGP_LPJ_T0100593.1 MGP_LPJ_G0038856.1 mouse_genomes_project 2 67142430 67142562 + Gm23328 snoRNA snoRNA MGP_LPJ_T0056985.1 MGP_LPJ_G0026316.1 mouse_genomes_project 2 124235222 124251019 - MGP_LPJ_P0056985 Tgm7 protein_coding protein_coding MGP_LPJ_T0056829.1 MGP_LPJ_G0026292.1 mouse_genomes_project 2 123141168 123146132 + MGP_LPJ_P0056829 Jmjd7 protein_coding protein_coding MGP_LPJ_T0056831.1 MGP_LPJ_G0026292.1 mouse_genomes_project 2 123141189 123144076 + MGP_LPJ_P0056831 Jmjd7 protein_coding nonsense_mediated_decay MGP_LPJ_T0056834.1 MGP_LPJ_G0026292.1 mouse_genomes_project 2 123141201 123145414 + Jmjd7 protein_coding processed_transcript MGP_LPJ_T0056835.1 MGP_LPJ_G0026292.1 mouse_genomes_project 2 123141242 123144931 + Jmjd7 protein_coding processed_transcript MGP_LPJ_T0056836.1 MGP_LPJ_G0026292.1 mouse_genomes_project 2 123141279 123143923 + MGP_LPJ_P0056836 Jmjd7 protein_coding nonsense_mediated_decay MGP_LPJ_T0013675.1 MGP_LPJ_G0011766.1 mouse_genomes_project 2 111049020 111049280 - processed_pseudogene processed_pseudogene MGP_LPJ_T0057679.1 MGP_LPJ_G0026472.1 mouse_genomes_project 2 135683584 135701901 + MGP_LPJ_P0057679 Prnp protein_coding protein_coding MGP_LPJ_T0057680.1 MGP_LPJ_G0026472.1 mouse_genomes_project 2 135683598 135691816 + Prnp protein_coding processed_transcript MGP_LPJ_T0013430.1 MGP_LPJ_G0011521.1 mouse_genomes_project 2 22244703 22245647 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013623.1 MGP_LPJ_G0011714.1 mouse_genomes_project 2 90507005 90507812 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099372.1 MGP_LPJ_G0037635.1 mouse_genomes_project 2 188039310 188039413 - Gm22708 snRNA snRNA MGP_LPJ_T0013827.1 MGP_LPJ_G0011918.1 mouse_genomes_project 2 173357176 173357652 + processed_pseudogene processed_pseudogene MGP_LPJ_T0054341.1 MGP_LPJ_G0025605.1 mouse_genomes_project 2 35375970 35376909 + MGP_LPJ_P0054341 Olfr50 protein_coding protein_coding MGP_LPJ_T0100613.1 MGP_LPJ_G0038876.1 mouse_genomes_project 2 133748972 133749059 + Gm22424 snoRNA snoRNA MGP_LPJ_T0052309.1 MGP_LPJ_G0025261.1 mouse_genomes_project 2 3424125 3553774 + MGP_LPJ_P0052309 Usp6nl protein_coding protein_coding MGP_LPJ_T0052310.1 MGP_LPJ_G0025261.1 mouse_genomes_project 2 3424230 3528396 + Usp6nl protein_coding processed_transcript MGP_LPJ_T0052311.1 MGP_LPJ_G0025261.1 mouse_genomes_project 2 3453177 3550878 + MGP_LPJ_P0052311 Usp6nl protein_coding protein_coding MGP_LPJ_T0052312.1 MGP_LPJ_G0025261.1 mouse_genomes_project 2 3528305 3532219 + Usp6nl protein_coding processed_transcript MGP_LPJ_T0058859.1 MGP_LPJ_G0026748.1 mouse_genomes_project 2 168358718 168362395 + Srsf6 protein_coding retained_intron MGP_LPJ_T0058860.1 MGP_LPJ_G0026748.1 mouse_genomes_project 2 168358718 168364311 + MGP_LPJ_P0058860 Srsf6 protein_coding protein_coding MGP_LPJ_T0058861.1 MGP_LPJ_G0026748.1 mouse_genomes_project 2 168358752 168362213 + MGP_LPJ_P0058861 Srsf6 protein_coding nonsense_mediated_decay MGP_LPJ_T0058862.1 MGP_LPJ_G0026748.1 mouse_genomes_project 2 168358851 168360696 + MGP_LPJ_P0058862 Srsf6 protein_coding protein_coding MGP_LPJ_T0059546.1 MGP_LPJ_G0026923.1 mouse_genomes_project 2 186767699 186787720 - MGP_LPJ_P0059546 Cables2 protein_coding protein_coding MGP_LPJ_T0059547.1 MGP_LPJ_G0026923.1 mouse_genomes_project 2 186767702 186787687 - Cables2 protein_coding retained_intron MGP_LPJ_T0059548.1 MGP_LPJ_G0026923.1 mouse_genomes_project 2 186771318 186775788 - Cables2 protein_coding retained_intron MGP_LPJ_T0059549.1 MGP_LPJ_G0026923.1 mouse_genomes_project 2 186776154 186787720 - Cables2 protein_coding retained_intron MGP_LPJ_T0059550.1 MGP_LPJ_G0026923.1 mouse_genomes_project 2 186776877 186787670 - Cables2 protein_coding retained_intron MGP_LPJ_T0007243.1 MGP_LPJ_G0005942.1 mouse_genomes_project 2 74320969 74321519 + Gm28640 lincRNA lincRNA MGP_LPJ_T0054975.1 MGP_LPJ_G0025731.1 mouse_genomes_project 2 69236590 69409399 - MGP_LPJ_P0054975 Lrp2 protein_coding protein_coding MGP_LPJ_T0054976.1 MGP_LPJ_G0025731.1 mouse_genomes_project 2 69321410 69409363 - MGP_LPJ_P0054976 Lrp2 protein_coding protein_coding MGP_LPJ_T0054977.1 MGP_LPJ_G0025731.1 mouse_genomes_project 2 69322829 69324352 - Lrp2 protein_coding processed_transcript MGP_LPJ_T0054978.1 MGP_LPJ_G0025731.1 mouse_genomes_project 2 69342898 69409363 - MGP_LPJ_P0054978 Lrp2 protein_coding protein_coding MGP_LPJ_T0007417.1 MGP_LPJ_G0006083.1 mouse_genomes_project 2 173621490 173628939 - 1200007C13Rik lincRNA lincRNA MGP_LPJ_T0017756.1 MGP_LPJ_G0015360.1 mouse_genomes_project 2 94519397 94578558 - Gm13791 processed_transcript processed_transcript MGP_LPJ_T0052592.1 MGP_LPJ_G0025305.1 mouse_genomes_project 2 15752435 15776260 - MGP_LPJ_P0052592 Dnajc1 protein_coding protein_coding MGP_LPJ_T0052593.1 MGP_LPJ_G0025305.1 mouse_genomes_project 2 15763114 15949979 - MGP_LPJ_P0052593 Dnajc1 protein_coding protein_coding MGP_LPJ_T0052594.1 MGP_LPJ_G0025305.1 mouse_genomes_project 2 15766010 15773605 - Dnajc1 protein_coding processed_transcript MGP_LPJ_T0052595.1 MGP_LPJ_G0025305.1 mouse_genomes_project 2 15770451 15949998 - MGP_LPJ_P0052595 Dnajc1 protein_coding protein_coding MGP_LPJ_T0052596.1 MGP_LPJ_G0025305.1 mouse_genomes_project 2 15773837 15949810 - MGP_LPJ_P0052596 Dnajc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0052597.1 MGP_LPJ_G0025305.1 mouse_genomes_project 2 15773837 15949588 - MGP_LPJ_P0052597 Dnajc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0052598.1 MGP_LPJ_G0025305.1 mouse_genomes_project 2 15773857 15949589 - MGP_LPJ_P0052598 Dnajc1 protein_coding protein_coding MGP_LPJ_T0052599.1 MGP_LPJ_G0025305.1 mouse_genomes_project 2 15776233 15857483 - MGP_LPJ_P0052599 Dnajc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0052600.1 MGP_LPJ_G0025305.1 mouse_genomes_project 2 15857104 15860725 - Dnajc1 protein_coding retained_intron MGP_LPJ_T0052601.1 MGP_LPJ_G0025305.1 mouse_genomes_project 2 15859051 15949992 - Dnajc1 protein_coding processed_transcript MGP_LPJ_T0052602.1 MGP_LPJ_G0025305.1 mouse_genomes_project 2 15868226 15949998 - Dnajc1 protein_coding retained_intron MGP_LPJ_T0056904.1 MGP_LPJ_G0026304.1 mouse_genomes_project 2 123634508 123694917 - MGP_LPJ_P0056904 Zfp106 protein_coding protein_coding MGP_LPJ_T0056905.1 MGP_LPJ_G0026304.1 mouse_genomes_project 2 123639240 123671359 - MGP_LPJ_P0056905 Zfp106 protein_coding protein_coding MGP_LPJ_T0056906.1 MGP_LPJ_G0026304.1 mouse_genomes_project 2 123639957 123642474 - Zfp106 protein_coding retained_intron MGP_LPJ_T0056907.1 MGP_LPJ_G0026304.1 mouse_genomes_project 2 123648489 123652207 - Zfp106 protein_coding retained_intron MGP_LPJ_T0056908.1 MGP_LPJ_G0026304.1 mouse_genomes_project 2 123654378 123656305 - MGP_LPJ_P0056908 Zfp106 protein_coding protein_coding MGP_LPJ_T0056909.1 MGP_LPJ_G0026304.1 mouse_genomes_project 2 123657955 123694924 - Zfp106 protein_coding retained_intron MGP_LPJ_T0056910.1 MGP_LPJ_G0026304.1 mouse_genomes_project 2 123658745 123660545 - Zfp106 protein_coding retained_intron MGP_LPJ_T0056911.1 MGP_LPJ_G0026304.1 mouse_genomes_project 2 123660369 123664085 - MGP_LPJ_P0056911 Zfp106 protein_coding nonsense_mediated_decay MGP_LPJ_T0056912.1 MGP_LPJ_G0026304.1 mouse_genomes_project 2 123663912 123694953 - MGP_LPJ_P0056912 Zfp106 protein_coding protein_coding MGP_LPJ_T0056913.1 MGP_LPJ_G0026304.1 mouse_genomes_project 2 123667135 123685300 - MGP_LPJ_P0056913 Zfp106 protein_coding protein_coding MGP_LPJ_T0056914.1 MGP_LPJ_G0026304.1 mouse_genomes_project 2 123667268 123694944 - Zfp106 protein_coding processed_transcript MGP_LPJ_T0001092.1 MGP_LPJ_G0001017.1 mouse_genomes_project 2 31388476 31393529 - TEC TEC MGP_LPJ_T0055405.1 MGP_LPJ_G0025816.1 mouse_genomes_project 2 80857146 80895550 - MGP_LPJ_P0055405 Frzb protein_coding protein_coding MGP_LPJ_T0055406.1 MGP_LPJ_G0025816.1 mouse_genomes_project 2 80858289 80886647 - Frzb protein_coding processed_transcript MGP_LPJ_T0055167.1 MGP_LPJ_G0025766.1 mouse_genomes_project 2 73417609 73423156 + MGP_LPJ_P0055167 Sp9 protein_coding protein_coding MGP_LPJ_T0055168.1 MGP_LPJ_G0025766.1 mouse_genomes_project 2 73417650 73430493 + Sp9 protein_coding processed_transcript MGP_LPJ_T0004028.1 MGP_LPJ_G0003588.1 mouse_genomes_project 2 74754550 74760009 + 4930445N08Rik antisense antisense MGP_LPJ_T0001068.1 MGP_LPJ_G0000993.1 mouse_genomes_project 2 10381916 10384517 + TEC TEC MGP_LPJ_T0055790.1 MGP_LPJ_G0026050.1 mouse_genomes_project 2 91146442 91151253 - MGP_LPJ_P0055790 Olfr1254 protein_coding protein_coding MGP_LPJ_T0055791.1 MGP_LPJ_G0026050.1 mouse_genomes_project 2 91146442 91147387 - MGP_LPJ_P0055791 Olfr1254 protein_coding protein_coding MGP_LPJ_T0013787.1 MGP_LPJ_G0011878.1 mouse_genomes_project 2 159779241 159799501 - processed_pseudogene processed_pseudogene MGP_LPJ_T0053125.1 MGP_LPJ_G0025406.1 mouse_genomes_project 2 23794310 23839047 - MGP_LPJ_P0053125 Camsap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053126.1 MGP_LPJ_G0025406.1 mouse_genomes_project 2 23795720 23857133 - MGP_LPJ_P0053126 Camsap1 protein_coding protein_coding MGP_LPJ_T0053127.1 MGP_LPJ_G0025406.1 mouse_genomes_project 2 23796539 23805916 - MGP_LPJ_P0053127 Camsap1 protein_coding unknown_likely_coding MGP_LPJ_T0053128.1 MGP_LPJ_G0025406.1 mouse_genomes_project 2 23796539 23805916 - MGP_LPJ_P0053128 Camsap1 protein_coding unknown_likely_coding MGP_LPJ_T0053129.1 MGP_LPJ_G0025406.1 mouse_genomes_project 2 23796745 23802375 - Camsap1 protein_coding processed_transcript MGP_LPJ_T0053130.1 MGP_LPJ_G0025406.1 mouse_genomes_project 2 23796756 23801428 - Camsap1 protein_coding processed_transcript MGP_LPJ_T0053131.1 MGP_LPJ_G0025406.1 mouse_genomes_project 2 23815331 23839176 - MGP_LPJ_P0053131 Camsap1 protein_coding protein_coding MGP_LPJ_T0053132.1 MGP_LPJ_G0025406.1 mouse_genomes_project 2 23815350 23836777 - MGP_LPJ_P0053132 Camsap1 protein_coding protein_coding MGP_LPJ_T0053133.1 MGP_LPJ_G0025406.1 mouse_genomes_project 2 23815524 23839084 - MGP_LPJ_P0053133 Camsap1 protein_coding protein_coding MGP_LPJ_T0053134.1 MGP_LPJ_G0025406.1 mouse_genomes_project 2 23827301 23857059 - MGP_LPJ_P0053134 Camsap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053135.1 MGP_LPJ_G0025406.1 mouse_genomes_project 2 23836770 23856907 - MGP_LPJ_P0053135 Camsap1 protein_coding protein_coding MGP_LPJ_T0055254.1 MGP_LPJ_G0025786.1 mouse_genomes_project 2 74941315 74943477 + MGP_LPJ_P0055254 Hoxd1 protein_coding protein_coding MGP_LPJ_T0017842.1 MGP_LPJ_G0015399.1 mouse_genomes_project 2 163257265 163258017 + Gm20412 processed_transcript processed_transcript MGP_LPJ_T0004173.1 MGP_LPJ_G0003690.1 mouse_genomes_project 2 169166866 169174105 - Gm16316 antisense antisense MGP_LPJ_T0098410.1 MGP_LPJ_G0036691.1 mouse_genomes_project 2 106181369 106181508 + Gm24644 scaRNA scaRNA MGP_LPJ_T0055737.1 MGP_LPJ_G0026008.1 mouse_genomes_project 2 90124263 90126679 + MGP_LPJ_P0055737 Olfr1205 protein_coding protein_coding MGP_LPJ_T0004171.1 MGP_LPJ_G0003689.1 mouse_genomes_project 2 169126491 169129655 + antisense antisense MGP_LPJ_T0004172.1 MGP_LPJ_G0003689.1 mouse_genomes_project 2 169126491 169129654 + antisense antisense MGP_LPJ_T0013627.1 MGP_LPJ_G0011718.1 mouse_genomes_project 2 93069329 93069634 - processed_pseudogene processed_pseudogene MGP_LPJ_T0053786.1 MGP_LPJ_G0025512.1 mouse_genomes_project 2 29235042 29361460 - MGP_LPJ_P0053786 Fnbp1 protein_coding protein_coding MGP_LPJ_T0053787.1 MGP_LPJ_G0025512.1 mouse_genomes_project 2 29235043 29311925 - MGP_LPJ_P0053787 Fnbp1 protein_coding protein_coding MGP_LPJ_T0053788.1 MGP_LPJ_G0025512.1 mouse_genomes_project 2 29235043 29361666 - MGP_LPJ_P0053788 Fnbp1 protein_coding protein_coding MGP_LPJ_T0053789.1 MGP_LPJ_G0025512.1 mouse_genomes_project 2 29235044 29361654 - MGP_LPJ_P0053789 Fnbp1 protein_coding protein_coding MGP_LPJ_T0053790.1 MGP_LPJ_G0025512.1 mouse_genomes_project 2 29235631 29361615 - MGP_LPJ_P0053790 Fnbp1 protein_coding protein_coding MGP_LPJ_T0053791.1 MGP_LPJ_G0025512.1 mouse_genomes_project 2 29237031 29311925 - Fnbp1 protein_coding processed_transcript MGP_LPJ_T0053792.1 MGP_LPJ_G0025512.1 mouse_genomes_project 2 29241537 29322071 - MGP_LPJ_P0053792 Fnbp1 protein_coding protein_coding MGP_LPJ_T0053793.1 MGP_LPJ_G0025512.1 mouse_genomes_project 2 29241842 29361460 - MGP_LPJ_P0053793 Fnbp1 protein_coding protein_coding MGP_LPJ_T0053794.1 MGP_LPJ_G0025512.1 mouse_genomes_project 2 29241853 29361460 - MGP_LPJ_P0053794 Fnbp1 protein_coding protein_coding MGP_LPJ_T0053795.1 MGP_LPJ_G0025512.1 mouse_genomes_project 2 29241853 29361460 - MGP_LPJ_P0053795 Fnbp1 protein_coding protein_coding MGP_LPJ_T0053796.1 MGP_LPJ_G0025512.1 mouse_genomes_project 2 29241853 29361460 - MGP_LPJ_P0053796 Fnbp1 protein_coding protein_coding MGP_LPJ_T0053797.1 MGP_LPJ_G0025512.1 mouse_genomes_project 2 29241934 29265622 - MGP_LPJ_P0053797 Fnbp1 protein_coding protein_coding MGP_LPJ_T0053798.1 MGP_LPJ_G0025512.1 mouse_genomes_project 2 29263458 29361597 - MGP_LPJ_P0053798 Fnbp1 protein_coding protein_coding MGP_LPJ_T0053799.1 MGP_LPJ_G0025512.1 mouse_genomes_project 2 29265744 29361613 - MGP_LPJ_P0053799 Fnbp1 protein_coding protein_coding MGP_LPJ_T0053800.1 MGP_LPJ_G0025512.1 mouse_genomes_project 2 29269121 29332975 - MGP_LPJ_P0053800 Fnbp1 protein_coding protein_coding MGP_LPJ_T0053801.1 MGP_LPJ_G0025512.1 mouse_genomes_project 2 29311515 29322169 - Fnbp1 protein_coding processed_transcript MGP_LPJ_T0010466.1 MGP_LPJ_G0008584.1 mouse_genomes_project 2 116933716 116933771 - Mir7002 miRNA miRNA MGP_LPJ_T0053866.1 MGP_LPJ_G0025525.1 mouse_genomes_project 2 30259877 30342214 + MGP_LPJ_P0053866 Nup214 protein_coding protein_coding MGP_LPJ_T0053867.1 MGP_LPJ_G0025525.1 mouse_genomes_project 2 30259927 30265383 + Nup214 protein_coding retained_intron MGP_LPJ_T0053868.1 MGP_LPJ_G0025525.1 mouse_genomes_project 2 30265198 30276788 + Nup214 protein_coding processed_transcript MGP_LPJ_T0053869.1 MGP_LPJ_G0025525.1 mouse_genomes_project 2 30280215 30284092 + Nup214 protein_coding processed_transcript MGP_LPJ_T0053870.1 MGP_LPJ_G0025525.1 mouse_genomes_project 2 30283355 30290389 + MGP_LPJ_P0053870 Nup214 protein_coding protein_coding MGP_LPJ_T0053871.1 MGP_LPJ_G0025525.1 mouse_genomes_project 2 30298436 30299810 + Nup214 protein_coding processed_transcript MGP_LPJ_T0053872.1 MGP_LPJ_G0025525.1 mouse_genomes_project 2 30313462 30321626 + Nup214 protein_coding processed_transcript MGP_LPJ_T0053873.1 MGP_LPJ_G0025525.1 mouse_genomes_project 2 30323879 30345097 + MGP_LPJ_P0053873 Nup214 protein_coding protein_coding MGP_LPJ_T0053874.1 MGP_LPJ_G0025525.1 mouse_genomes_project 2 30332421 30342210 + MGP_LPJ_P0053874 Nup214 protein_coding protein_coding MGP_LPJ_T0053876.1 MGP_LPJ_G0025525.1 mouse_genomes_project 2 30340837 30342697 + Nup214 protein_coding retained_intron MGP_LPJ_T0053877.1 MGP_LPJ_G0025525.1 mouse_genomes_project 2 30341534 30342208 + Nup214 protein_coding retained_intron MGP_LPJ_T0058157.1 MGP_LPJ_G0026594.1 mouse_genomes_project 2 157092604 157097057 - MGP_LPJ_P0058157 Sox12 protein_coding protein_coding MGP_LPJ_T0058158.1 MGP_LPJ_G0026594.1 mouse_genomes_project 2 157092607 157097040 - MGP_LPJ_P0058158 Sox12 protein_coding protein_coding MGP_LPJ_T0055723.1 MGP_LPJ_G0025995.1 mouse_genomes_project 2 89792528 89793440 + MGP_LPJ_P0055723 Olfr1186 protein_coding protein_coding MGP_LPJ_T0053195.1 MGP_LPJ_G0025417.1 mouse_genomes_project 2 24277099 24283614 - MGP_LPJ_P0053195 Sdccag3 protein_coding protein_coding MGP_LPJ_T0053196.1 MGP_LPJ_G0025417.1 mouse_genomes_project 2 24277099 24283589 - MGP_LPJ_P0053196 Sdccag3 protein_coding protein_coding MGP_LPJ_T0053197.1 MGP_LPJ_G0025417.1 mouse_genomes_project 2 24277099 24283595 - MGP_LPJ_P0053197 Sdccag3 protein_coding protein_coding MGP_LPJ_T0053198.1 MGP_LPJ_G0025417.1 mouse_genomes_project 2 24277099 24283602 - MGP_LPJ_P0053198 Sdccag3 protein_coding protein_coding MGP_LPJ_T0053199.1 MGP_LPJ_G0025417.1 mouse_genomes_project 2 24277100 24281879 - Sdccag3 protein_coding processed_transcript MGP_LPJ_T0053200.1 MGP_LPJ_G0025417.1 mouse_genomes_project 2 24277852 24279511 - Sdccag3 protein_coding processed_transcript MGP_LPJ_T0053201.1 MGP_LPJ_G0025417.1 mouse_genomes_project 2 24277861 24279907 - Sdccag3 protein_coding processed_transcript MGP_LPJ_T0053202.1 MGP_LPJ_G0025417.1 mouse_genomes_project 2 24280952 24283604 - Sdccag3 protein_coding processed_transcript MGP_LPJ_T0053203.1 MGP_LPJ_G0025417.1 mouse_genomes_project 2 24280952 24283581 - Sdccag3 protein_coding processed_transcript MGP_LPJ_T0053204.1 MGP_LPJ_G0025417.1 mouse_genomes_project 2 24281310 24283593 - Sdccag3 protein_coding processed_transcript MGP_LPJ_T0053205.1 MGP_LPJ_G0025417.1 mouse_genomes_project 2 24281402 24282992 - MGP_LPJ_P0053205 Sdccag3 protein_coding protein_coding MGP_LPJ_T0053206.1 MGP_LPJ_G0025417.1 mouse_genomes_project 2 24281423 24283565 - Sdccag3 protein_coding processed_transcript MGP_LPJ_T0053207.1 MGP_LPJ_G0025417.1 mouse_genomes_project 2 24281853 24283463 - Sdccag3 protein_coding processed_transcript MGP_LPJ_T0052872.1 MGP_LPJ_G0025352.1 mouse_genomes_project 2 22991032 22993614 + MGP_LPJ_P0052872 Nrarp protein_coding protein_coding MGP_LPJ_T0053035.1 MGP_LPJ_G0025382.1 mouse_genomes_project 2 23330359 23333899 - MGP_LPJ_P0053035 C8g protein_coding protein_coding MGP_LPJ_T0053036.1 MGP_LPJ_G0025382.1 mouse_genomes_project 2 23330359 23332322 - MGP_LPJ_P0053036 C8g protein_coding protein_coding MGP_LPJ_T0053037.1 MGP_LPJ_G0025382.1 mouse_genomes_project 2 23330364 23331964 - C8g protein_coding processed_transcript MGP_LPJ_T0053038.1 MGP_LPJ_G0025382.1 mouse_genomes_project 2 23330364 23331211 - C8g protein_coding processed_transcript MGP_LPJ_T0053039.1 MGP_LPJ_G0025382.1 mouse_genomes_project 2 23330364 23331944 - C8g protein_coding processed_transcript MGP_LPJ_T0053040.1 MGP_LPJ_G0025382.1 mouse_genomes_project 2 23330366 23331952 - C8g protein_coding processed_transcript MGP_LPJ_T0053041.1 MGP_LPJ_G0025382.1 mouse_genomes_project 2 23330605 23331823 - C8g protein_coding processed_transcript MGP_LPJ_T0013455.1 MGP_LPJ_G0011546.1 mouse_genomes_project 2 34742097 34742462 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098236.1 MGP_LPJ_G0036517.1 mouse_genomes_project 2 121353951 121354045 + Gm22651 rRNA rRNA MGP_LPJ_T0004095.1 MGP_LPJ_G0003633.1 mouse_genomes_project 2 132776660 132800454 - AI847159 antisense antisense MGP_LPJ_T0004096.1 MGP_LPJ_G0003633.1 mouse_genomes_project 2 132797967 132800454 - AI847159 antisense antisense MGP_LPJ_T0004097.1 MGP_LPJ_G0003633.1 mouse_genomes_project 2 132797971 132798361 - AI847159 antisense antisense MGP_LPJ_T0004098.1 MGP_LPJ_G0003633.1 mouse_genomes_project 2 132798015 132800489 - AI847159 antisense antisense MGP_LPJ_T0099357.1 MGP_LPJ_G0037620.1 mouse_genomes_project 2 137212339 137212398 + Gm27449 snRNA snRNA MGP_LPJ_T0059142.1 MGP_LPJ_G0026829.1 mouse_genomes_project 2 171012457 171082400 - MGP_LPJ_P0059142 Slc13a3 protein_coding protein_coding MGP_LPJ_T0059143.1 MGP_LPJ_G0026829.1 mouse_genomes_project 2 171012724 171082400 - MGP_LPJ_P0059143 Slc13a3 protein_coding protein_coding MGP_LPJ_T0059144.1 MGP_LPJ_G0026829.1 mouse_genomes_project 2 171014134 171016494 - Slc13a3 protein_coding retained_intron MGP_LPJ_T0059145.1 MGP_LPJ_G0026829.1 mouse_genomes_project 2 171019310 171027714 - Slc13a3 protein_coding retained_intron MGP_LPJ_T0059146.1 MGP_LPJ_G0026829.1 mouse_genomes_project 2 171050596 171082369 - Slc13a3 protein_coding retained_intron MGP_LPJ_T0055950.1 MGP_LPJ_G0026085.1 mouse_genomes_project 2 92736329 92764526 - Ddb2 protein_coding processed_transcript MGP_LPJ_T0055951.1 MGP_LPJ_G0026085.1 mouse_genomes_project 2 92736345 92765932 - Ddb2 protein_coding processed_transcript MGP_LPJ_T0055952.1 MGP_LPJ_G0026085.1 mouse_genomes_project 2 92736360 92765910 - MGP_LPJ_P0055952 Ddb2 protein_coding protein_coding MGP_LPJ_T0055953.1 MGP_LPJ_G0026085.1 mouse_genomes_project 2 92736378 92765985 - Ddb2 protein_coding processed_transcript MGP_LPJ_T0055954.1 MGP_LPJ_G0026085.1 mouse_genomes_project 2 92736613 92766007 - MGP_LPJ_P0055954 Ddb2 protein_coding protein_coding MGP_LPJ_T0056772.1 MGP_LPJ_G0026282.1 mouse_genomes_project 2 122687645 122699105 - MGP_LPJ_P0056772 Oip5 protein_coding protein_coding MGP_LPJ_T0001103.1 MGP_LPJ_G0001028.1 mouse_genomes_project 2 37136895 37141752 + TEC TEC MGP_LPJ_T0053326.1 MGP_LPJ_G0025438.1 mouse_genomes_project 2 24937598 24944158 - Slc2a6 protein_coding processed_transcript MGP_LPJ_T0053327.1 MGP_LPJ_G0025438.1 mouse_genomes_project 2 24937598 24944182 - Slc2a6 protein_coding processed_transcript MGP_LPJ_T0053328.1 MGP_LPJ_G0025438.1 mouse_genomes_project 2 24937598 24944145 - MGP_LPJ_P0053328 Slc2a6 protein_coding protein_coding MGP_LPJ_T0053329.1 MGP_LPJ_G0025438.1 mouse_genomes_project 2 24937598 24944234 - MGP_LPJ_P0053329 Slc2a6 protein_coding protein_coding MGP_LPJ_T0053330.1 MGP_LPJ_G0025438.1 mouse_genomes_project 2 24940303 24942227 - Slc2a6 protein_coding processed_transcript MGP_LPJ_T0053331.1 MGP_LPJ_G0025438.1 mouse_genomes_project 2 24942323 24944227 - MGP_LPJ_P0053331 Slc2a6 protein_coding protein_coding MGP_LPJ_T0058179.1 MGP_LPJ_G0026610.1 mouse_genomes_project 2 157396422 157438239 + MGP_LPJ_P0058179 H13 protein_coding protein_coding MGP_LPJ_T0058180.1 MGP_LPJ_G0026610.1 mouse_genomes_project 2 157396447 157410320 + H13 protein_coding retained_intron MGP_LPJ_T0058181.1 MGP_LPJ_G0026610.1 mouse_genomes_project 2 157396449 157434841 + MGP_LPJ_P0058181 H13 protein_coding protein_coding MGP_LPJ_T0058182.1 MGP_LPJ_G0026610.1 mouse_genomes_project 2 157396449 157413585 + MGP_LPJ_P0058182 H13 protein_coding protein_coding MGP_LPJ_T0058183.1 MGP_LPJ_G0026610.1 mouse_genomes_project 2 157396495 157433933 + MGP_LPJ_P0058183 H13 protein_coding protein_coding MGP_LPJ_T0058185.1 MGP_LPJ_G0026610.1 mouse_genomes_project 2 157421649 157426070 + H13 protein_coding retained_intron MGP_LPJ_T0010411.1 MGP_LPJ_G0008529.1 mouse_genomes_project 2 27535900 27535980 - Mir133c miRNA miRNA MGP_LPJ_T0054147.1 MGP_LPJ_G0025567.1 mouse_genomes_project 2 32178385 32343161 - MGP_LPJ_P0054147 Mvb12b protein_coding protein_coding MGP_LPJ_T0054148.1 MGP_LPJ_G0025567.1 mouse_genomes_project 2 32237923 32241426 - Mvb12b protein_coding retained_intron MGP_LPJ_T0054149.1 MGP_LPJ_G0025567.1 mouse_genomes_project 2 32239780 32342060 - Mvb12b protein_coding processed_transcript MGP_LPJ_T0054150.1 MGP_LPJ_G0025567.1 mouse_genomes_project 2 32278040 32342060 - MGP_LPJ_P0054150 Mvb12b protein_coding protein_coding MGP_LPJ_T0054151.1 MGP_LPJ_G0025567.1 mouse_genomes_project 2 32328508 32342697 - Mvb12b protein_coding processed_transcript MGP_LPJ_T0053287.1 MGP_LPJ_G0025431.1 mouse_genomes_project 2 24830668 24832047 - Surf1 protein_coding retained_intron MGP_LPJ_T0053288.1 MGP_LPJ_G0025431.1 mouse_genomes_project 2 24830670 24833588 - MGP_LPJ_P0053288 Surf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053289.1 MGP_LPJ_G0025431.1 mouse_genomes_project 2 24830670 24833756 - MGP_LPJ_P0053289 Surf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053290.1 MGP_LPJ_G0025431.1 mouse_genomes_project 2 24830670 24833818 - MGP_LPJ_P0053290 Surf1 protein_coding protein_coding MGP_LPJ_T0053291.1 MGP_LPJ_G0025431.1 mouse_genomes_project 2 24830864 24833608 - MGP_LPJ_P0053291 Surf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053292.1 MGP_LPJ_G0025431.1 mouse_genomes_project 2 24830864 24833633 - MGP_LPJ_P0053292 Surf1 protein_coding protein_coding MGP_LPJ_T0053293.1 MGP_LPJ_G0025431.1 mouse_genomes_project 2 24831518 24833599 - Surf1 protein_coding retained_intron MGP_LPJ_T0053294.1 MGP_LPJ_G0025431.1 mouse_genomes_project 2 24831762 24832780 - Surf1 protein_coding retained_intron MGP_LPJ_T0053295.1 MGP_LPJ_G0025431.1 mouse_genomes_project 2 24832145 24833620 - MGP_LPJ_P0053295 Surf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053296.1 MGP_LPJ_G0025431.1 mouse_genomes_project 2 24832744 24833633 - MGP_LPJ_P0053296 Surf1 protein_coding protein_coding MGP_LPJ_T0057681.1 MGP_LPJ_G0026473.1 mouse_genomes_project 2 135683613 135719627 + MGP_LPJ_P0057681 Prn protein_coding protein_coding MGP_LPJ_T0057682.1 MGP_LPJ_G0026473.1 mouse_genomes_project 2 135683613 135719627 + MGP_LPJ_P0057682 Prn protein_coding protein_coding MGP_LPJ_T0054666.1 MGP_LPJ_G0025675.1 mouse_genomes_project 2 56606208 56744548 + Gpd2 protein_coding processed_transcript MGP_LPJ_T0054667.1 MGP_LPJ_G0025675.1 mouse_genomes_project 2 56606251 56747414 + MGP_LPJ_P0054667 Gpd2 protein_coding protein_coding MGP_LPJ_T0054668.1 MGP_LPJ_G0025675.1 mouse_genomes_project 2 56606870 56747414 + MGP_LPJ_P0054668 Gpd2 protein_coding protein_coding MGP_LPJ_T0054669.1 MGP_LPJ_G0025675.1 mouse_genomes_project 2 56606955 56747414 + MGP_LPJ_P0054669 Gpd2 protein_coding protein_coding MGP_LPJ_T0054670.1 MGP_LPJ_G0025675.1 mouse_genomes_project 2 56613705 56679885 + Gpd2 protein_coding processed_transcript MGP_LPJ_T0054671.1 MGP_LPJ_G0025675.1 mouse_genomes_project 2 56635682 56638656 + Gpd2 protein_coding processed_transcript MGP_LPJ_T0054672.1 MGP_LPJ_G0025675.1 mouse_genomes_project 2 56637924 56638656 + Gpd2 protein_coding processed_transcript MGP_LPJ_T0059415.1 MGP_LPJ_G0026891.1 mouse_genomes_project 2 179737763 179744934 + MGP_LPJ_P0059415 1700021F07Rik protein_coding protein_coding MGP_LPJ_T0004155.1 MGP_LPJ_G0003676.1 mouse_genomes_project 2 160814460 160815624 + Gm16098 antisense antisense MGP_LPJ_T0055772.1 MGP_LPJ_G0026037.1 mouse_genomes_project 2 90747534 90748479 - MGP_LPJ_P0055772 Olfr1240 protein_coding protein_coding MGP_LPJ_T0054864.1 MGP_LPJ_G0025708.1 mouse_genomes_project 2 64689111 64845213 - MGP_LPJ_P0054864 Cobll1 protein_coding protein_coding MGP_LPJ_T0054865.1 MGP_LPJ_G0025708.1 mouse_genomes_project 2 64689122 64845213 - MGP_LPJ_P0054865 Cobll1 protein_coding protein_coding MGP_LPJ_T0054866.1 MGP_LPJ_G0025708.1 mouse_genomes_project 2 64689122 64845213 - MGP_LPJ_P0054866 Cobll1 protein_coding protein_coding MGP_LPJ_T0054867.1 MGP_LPJ_G0025708.1 mouse_genomes_project 2 64689122 64845160 - MGP_LPJ_P0054867 Cobll1 protein_coding protein_coding MGP_LPJ_T0054868.1 MGP_LPJ_G0025708.1 mouse_genomes_project 2 64689122 64845308 - MGP_LPJ_P0054868 Cobll1 protein_coding protein_coding MGP_LPJ_T0054869.1 MGP_LPJ_G0025708.1 mouse_genomes_project 2 64699949 64706620 - Cobll1 protein_coding processed_transcript MGP_LPJ_T0054870.1 MGP_LPJ_G0025708.1 mouse_genomes_project 2 64729107 64845631 - MGP_LPJ_P0054870 Cobll1 protein_coding protein_coding MGP_LPJ_T0054871.1 MGP_LPJ_G0025708.1 mouse_genomes_project 2 64736915 64845683 - MGP_LPJ_P0054871 Cobll1 protein_coding protein_coding MGP_LPJ_T0054872.1 MGP_LPJ_G0025708.1 mouse_genomes_project 2 64739485 64842595 - Cobll1 protein_coding processed_transcript MGP_LPJ_T0054873.1 MGP_LPJ_G0025708.1 mouse_genomes_project 2 64739518 64845160 - MGP_LPJ_P0054873 Cobll1 protein_coding protein_coding MGP_LPJ_T0054874.1 MGP_LPJ_G0025708.1 mouse_genomes_project 2 64752738 64845634 - Cobll1 protein_coding processed_transcript MGP_LPJ_T0054875.1 MGP_LPJ_G0025708.1 mouse_genomes_project 2 64755295 64845990 - Cobll1 protein_coding processed_transcript MGP_LPJ_T0054876.1 MGP_LPJ_G0025708.1 mouse_genomes_project 2 64755459 64845061 - Cobll1 protein_coding processed_transcript MGP_LPJ_T0013766.1 MGP_LPJ_G0011857.1 mouse_genomes_project 2 151818070 151818379 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011536.1 MGP_LPJ_G0009654.1 mouse_genomes_project 2 170316845 170317161 + Gm22596 misc_RNA misc_RNA MGP_LPJ_T0056386.1 MGP_LPJ_G0026164.1 mouse_genomes_project 2 107251706 107261085 - Eif3m protein_coding retained_intron MGP_LPJ_T0056387.1 MGP_LPJ_G0026164.1 mouse_genomes_project 2 107251706 107272466 - MGP_LPJ_P0056387 Eif3m protein_coding protein_coding MGP_LPJ_T0056388.1 MGP_LPJ_G0026164.1 mouse_genomes_project 2 107251709 107260639 - MGP_LPJ_P0056388 Eif3m protein_coding protein_coding MGP_LPJ_T0056389.1 MGP_LPJ_G0026164.1 mouse_genomes_project 2 107251739 107272429 - MGP_LPJ_P0056389 Eif3m protein_coding protein_coding MGP_LPJ_T0056390.1 MGP_LPJ_G0026164.1 mouse_genomes_project 2 107251771 107272416 - MGP_LPJ_P0056390 Eif3m protein_coding unknown_likely_coding MGP_LPJ_T0055699.1 MGP_LPJ_G0025972.1 mouse_genomes_project 2 89051292 89052237 - MGP_LPJ_P0055699 Olfr1155 protein_coding protein_coding MGP_LPJ_T0003975.1 MGP_LPJ_G0003549.1 mouse_genomes_project 2 36910589 36912574 + Gm13556 antisense antisense MGP_LPJ_T0052511.1 MGP_LPJ_G0025290.1 mouse_genomes_project 2 11510849 11568593 + MGP_LPJ_P0052511 Stam protein_coding protein_coding MGP_LPJ_T0052512.1 MGP_LPJ_G0025290.1 mouse_genomes_project 2 11510859 11547598 + Stam protein_coding processed_transcript MGP_LPJ_T0052513.1 MGP_LPJ_G0025290.1 mouse_genomes_project 2 11510940 11563324 + MGP_LPJ_P0052513 Stam protein_coding protein_coding MGP_LPJ_T0052514.1 MGP_LPJ_G0025290.1 mouse_genomes_project 2 11510973 11566499 + MGP_LPJ_P0052514 Stam protein_coding nonsense_mediated_decay MGP_LPJ_T0052515.1 MGP_LPJ_G0025290.1 mouse_genomes_project 2 11511178 11548058 + MGP_LPJ_P0052515 Stam protein_coding protein_coding MGP_LPJ_T0052516.1 MGP_LPJ_G0025290.1 mouse_genomes_project 2 11547321 11548153 + Stam protein_coding retained_intron MGP_LPJ_T0052517.1 MGP_LPJ_G0025290.1 mouse_genomes_project 2 11548031 11550375 + Stam protein_coding processed_transcript MGP_LPJ_T0052518.1 MGP_LPJ_G0025290.1 mouse_genomes_project 2 11549828 11558141 + Stam protein_coding retained_intron MGP_LPJ_T0052519.1 MGP_LPJ_G0025290.1 mouse_genomes_project 2 11553106 11558083 + Stam protein_coding retained_intron MGP_LPJ_T0010416.1 MGP_LPJ_G0008534.1 mouse_genomes_project 2 28905866 28905950 + Mir3089 miRNA miRNA MGP_LPJ_T0055685.1 MGP_LPJ_G0025959.1 mouse_genomes_project 2 88803882 88804815 - MGP_LPJ_P0055685 Olfr1135 protein_coding protein_coding MGP_LPJ_T0010493.1 MGP_LPJ_G0008611.1 mouse_genomes_project 2 163819294 163819352 + Mir3474 miRNA miRNA MGP_LPJ_T0055255.1 MGP_LPJ_G0025787.1 mouse_genomes_project 2 75010637 75063362 + MGP_LPJ_P0055255 Mtx2 protein_coding protein_coding MGP_LPJ_T0055256.1 MGP_LPJ_G0025787.1 mouse_genomes_project 2 75010664 75053741 + Mtx2 protein_coding retained_intron MGP_LPJ_T0055257.1 MGP_LPJ_G0025787.1 mouse_genomes_project 2 75053907 75061435 + Mtx2 protein_coding retained_intron MGP_LPJ_T0057243.1 MGP_LPJ_G0026372.1 mouse_genomes_project 2 129265941 129295687 - MGP_LPJ_P0057243 Cops2 protein_coding protein_coding MGP_LPJ_T0057244.1 MGP_LPJ_G0026372.1 mouse_genomes_project 2 129267236 129295587 - MGP_LPJ_P0057244 Cops2 protein_coding protein_coding MGP_LPJ_T0057245.1 MGP_LPJ_G0026372.1 mouse_genomes_project 2 129267239 129295687 - MGP_LPJ_P0057245 Cops2 protein_coding protein_coding MGP_LPJ_T0057246.1 MGP_LPJ_G0026372.1 mouse_genomes_project 2 129279388 129295544 - Cops2 protein_coding processed_transcript MGP_LPJ_T0057247.1 MGP_LPJ_G0026372.1 mouse_genomes_project 2 129286299 129295611 - Cops2 protein_coding processed_transcript MGP_LPJ_T0055724.1 MGP_LPJ_G0025996.1 mouse_genomes_project 2 89801781 89802168 - MGP_LPJ_P0055724 Olfr1187-ps1 protein_coding protein_coding MGP_LPJ_T0055725.1 MGP_LPJ_G0025996.1 mouse_genomes_project 2 89801784 89802087 - MGP_LPJ_P0055725 Olfr1187-ps1 protein_coding protein_coding MGP_LPJ_T0100616.1 MGP_LPJ_G0038879.1 mouse_genomes_project 2 133984010 133984143 + Gm24451 snoRNA snoRNA MGP_LPJ_T0058926.1 MGP_LPJ_G0026764.1 mouse_genomes_project 2 169208336 169233034 - MGP_LPJ_P0058926 Ada protein_coding protein_coding MGP_LPJ_T0058927.1 MGP_LPJ_G0026764.1 mouse_genomes_project 2 169211807 169212659 - Ada protein_coding processed_transcript MGP_LPJ_T0053181.1 MGP_LPJ_G0025416.1 mouse_genomes_project 2 24257577 24275413 - MGP_LPJ_P0053181 Snapc4 protein_coding protein_coding MGP_LPJ_T0053182.1 MGP_LPJ_G0025416.1 mouse_genomes_project 2 24257579 24259837 - Snapc4 protein_coding processed_transcript MGP_LPJ_T0053183.1 MGP_LPJ_G0025416.1 mouse_genomes_project 2 24257586 24275417 - MGP_LPJ_P0053183 Snapc4 protein_coding protein_coding MGP_LPJ_T0053184.1 MGP_LPJ_G0025416.1 mouse_genomes_project 2 24257588 24275396 - Snapc4 protein_coding processed_transcript MGP_LPJ_T0053185.1 MGP_LPJ_G0025416.1 mouse_genomes_project 2 24261426 24262583 - Snapc4 protein_coding processed_transcript MGP_LPJ_T0053186.1 MGP_LPJ_G0025416.1 mouse_genomes_project 2 24264269 24268482 - MGP_LPJ_P0053186 Snapc4 protein_coding protein_coding MGP_LPJ_T0053187.1 MGP_LPJ_G0025416.1 mouse_genomes_project 2 24264298 24268462 - Snapc4 protein_coding processed_transcript MGP_LPJ_T0053188.1 MGP_LPJ_G0025416.1 mouse_genomes_project 2 24264319 24265956 - Snapc4 protein_coding processed_transcript MGP_LPJ_T0053189.1 MGP_LPJ_G0025416.1 mouse_genomes_project 2 24264796 24268979 - Snapc4 protein_coding processed_transcript MGP_LPJ_T0053190.1 MGP_LPJ_G0025416.1 mouse_genomes_project 2 24265645 24268206 - Snapc4 protein_coding processed_transcript MGP_LPJ_T0053191.1 MGP_LPJ_G0025416.1 mouse_genomes_project 2 24265645 24275399 - Snapc4 protein_coding processed_transcript MGP_LPJ_T0053192.1 MGP_LPJ_G0025416.1 mouse_genomes_project 2 24268412 24269589 - Snapc4 protein_coding processed_transcript MGP_LPJ_T0053193.1 MGP_LPJ_G0025416.1 mouse_genomes_project 2 24272489 24275417 - Snapc4 protein_coding processed_transcript MGP_LPJ_T0053194.1 MGP_LPJ_G0025416.1 mouse_genomes_project 2 24273194 24275390 - Snapc4 protein_coding processed_transcript MGP_LPJ_T0054387.1 MGP_LPJ_G0025629.1 mouse_genomes_project 2 36105491 36106331 + Gpr21 protein_coding processed_transcript MGP_LPJ_T0054389.1 MGP_LPJ_G0025629.1 mouse_genomes_project 2 36105785 36109763 + MGP_LPJ_P0054389 Gpr21 protein_coding protein_coding MGP_LPJ_T0010355.1 MGP_LPJ_G0008473.1 mouse_genomes_project 2 7726032 7726151 + Mir669e miRNA miRNA MGP_LPJ_T0058168.1 MGP_LPJ_G0026602.1 mouse_genomes_project 2 157247792 157249177 - MGP_LPJ_P0058168 Defb29 protein_coding protein_coding MGP_LPJ_T0056838.1 MGP_LPJ_G0026294.1 mouse_genomes_project 2 123146954 123155489 + protein_coding retained_intron MGP_LPJ_T0056839.1 MGP_LPJ_G0026294.1 mouse_genomes_project 2 123146970 123156550 + protein_coding retained_intron MGP_LPJ_T0056840.1 MGP_LPJ_G0026294.1 mouse_genomes_project 2 123146970 123155488 + MGP_LPJ_P0056840 protein_coding protein_coding MGP_LPJ_T0056841.1 MGP_LPJ_G0026294.1 mouse_genomes_project 2 123148080 123149655 + protein_coding retained_intron MGP_LPJ_T0056842.1 MGP_LPJ_G0026294.1 mouse_genomes_project 2 123152392 123153972 + protein_coding retained_intron MGP_LPJ_T0056843.1 MGP_LPJ_G0026294.1 mouse_genomes_project 2 123154493 123155214 + protein_coding retained_intron MGP_LPJ_T0013394.1 MGP_LPJ_G0011485.1 mouse_genomes_project 2 9774965 9775365 - processed_pseudogene processed_pseudogene MGP_LPJ_T0056594.1 MGP_LPJ_G0026240.1 mouse_genomes_project 2 117309177 117445185 - MGP_LPJ_P0056594 Dph6 protein_coding protein_coding MGP_LPJ_T0056595.1 MGP_LPJ_G0026240.1 mouse_genomes_project 2 117311351 117341219 - Dph6 protein_coding processed_transcript MGP_LPJ_T0056596.1 MGP_LPJ_G0026240.1 mouse_genomes_project 2 117311445 117445151 - MGP_LPJ_P0056596 Dph6 protein_coding protein_coding MGP_LPJ_T0056597.1 MGP_LPJ_G0026240.1 mouse_genomes_project 2 117314433 117445262 - Dph6 protein_coding retained_intron MGP_LPJ_T0056598.1 MGP_LPJ_G0026240.1 mouse_genomes_project 2 117430239 117445203 - Dph6 protein_coding retained_intron MGP_LPJ_T0007143.1 MGP_LPJ_G0005863.1 mouse_genomes_project 2 4219574 4223764 + Gm26565 lincRNA lincRNA MGP_LPJ_T0011509.1 MGP_LPJ_G0009627.1 mouse_genomes_project 2 39313535 39313705 - Gm27348 misc_RNA misc_RNA MGP_LPJ_T0058018.1 MGP_LPJ_G0026558.1 mouse_genomes_project 2 153509305 153510242 - MGP_LPJ_P0058018 protein_coding protein_coding MGP_LPJ_T0013815.1 MGP_LPJ_G0011906.1 mouse_genomes_project 2 168321251 168321881 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013701.1 MGP_LPJ_G0011792.1 mouse_genomes_project 2 124547026 124547273 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003918.1 MGP_LPJ_G0003505.1 mouse_genomes_project 2 15575476 15582570 + Gm13330 antisense antisense MGP_LPJ_T0054673.1 MGP_LPJ_G0025676.1 mouse_genomes_project 2 57406427 57453318 + MGP_LPJ_P0054673 Galnt5 protein_coding protein_coding MGP_LPJ_T0054674.1 MGP_LPJ_G0025676.1 mouse_genomes_project 2 57406427 57447299 + MGP_LPJ_P0054674 Galnt5 protein_coding protein_coding MGP_LPJ_T0056852.1 MGP_LPJ_G0026297.1 mouse_genomes_project 2 123281702 123307253 - Pla2g4e protein_coding retained_intron MGP_LPJ_T0056853.1 MGP_LPJ_G0026297.1 mouse_genomes_project 2 123281702 123359977 - MGP_LPJ_P0056853 Pla2g4e protein_coding protein_coding MGP_LPJ_T0056854.1 MGP_LPJ_G0026297.1 mouse_genomes_project 2 123287480 123359730 - Pla2g4e protein_coding retained_intron MGP_LPJ_T0056855.1 MGP_LPJ_G0026297.1 mouse_genomes_project 2 123305457 123359756 - Pla2g4e protein_coding processed_transcript MGP_LPJ_T0058184.1 MGP_LPJ_G0026611.1 mouse_genomes_project 2 157413927 157417760 + MGP_LPJ_P0058184 Mcts2 protein_coding protein_coding MGP_LPJ_T0058269.1 MGP_LPJ_G0026632.1 mouse_genomes_project 2 158422758 158438494 - MGP_LPJ_P0058269 Commd7 protein_coding protein_coding MGP_LPJ_T0058270.1 MGP_LPJ_G0026632.1 mouse_genomes_project 2 158424555 158438444 - Commd7 protein_coding retained_intron MGP_LPJ_T0058271.1 MGP_LPJ_G0026632.1 mouse_genomes_project 2 158424555 158438453 - MGP_LPJ_P0058271 Commd7 protein_coding protein_coding MGP_LPJ_T0013688.1 MGP_LPJ_G0011779.1 mouse_genomes_project 2 115122274 115122575 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013644.1 MGP_LPJ_G0011735.1 mouse_genomes_project 2 101461008 101461636 + processed_pseudogene processed_pseudogene MGP_LPJ_T0058236.1 MGP_LPJ_G0026624.1 mouse_genomes_project 2 157918596 157968784 + Tm9sf4 protein_coding processed_transcript MGP_LPJ_T0058237.1 MGP_LPJ_G0026624.1 mouse_genomes_project 2 157918596 157974403 + MGP_LPJ_P0058237 Tm9sf4 protein_coding protein_coding MGP_LPJ_T0058238.1 MGP_LPJ_G0026624.1 mouse_genomes_project 2 157918834 157951394 + Tm9sf4 protein_coding processed_transcript MGP_LPJ_T0058239.1 MGP_LPJ_G0026624.1 mouse_genomes_project 2 157918841 157955869 + Tm9sf4 protein_coding retained_intron MGP_LPJ_T0058240.1 MGP_LPJ_G0026624.1 mouse_genomes_project 2 157952732 157954521 + Tm9sf4 protein_coding retained_intron MGP_LPJ_T0058241.1 MGP_LPJ_G0026624.1 mouse_genomes_project 2 157953259 157964915 + Tm9sf4 protein_coding processed_transcript MGP_LPJ_T0058242.1 MGP_LPJ_G0026624.1 mouse_genomes_project 2 157956674 157967824 + Tm9sf4 protein_coding processed_transcript MGP_LPJ_T0058243.1 MGP_LPJ_G0026624.1 mouse_genomes_project 2 157957863 157963069 + Tm9sf4 protein_coding processed_transcript MGP_LPJ_T0058244.1 MGP_LPJ_G0026624.1 mouse_genomes_project 2 157964401 157974403 + Tm9sf4 protein_coding retained_intron MGP_LPJ_T0058245.1 MGP_LPJ_G0026624.1 mouse_genomes_project 2 157966057 157974403 + Tm9sf4 protein_coding retained_intron MGP_LPJ_T0058109.1 MGP_LPJ_G0026579.1 mouse_genomes_project 2 156305481 156330071 - MGP_LPJ_P0058109 Rad21l protein_coding protein_coding MGP_LPJ_T0058110.1 MGP_LPJ_G0026579.1 mouse_genomes_project 2 156305481 156330071 - MGP_LPJ_P0058110 Rad21l protein_coding protein_coding MGP_LPJ_T0055217.1 MGP_LPJ_G0025774.1 mouse_genomes_project 2 74089688 74092568 - MGP_LPJ_P0055217 Atp5g3 protein_coding protein_coding MGP_LPJ_T0055218.1 MGP_LPJ_G0025774.1 mouse_genomes_project 2 74089688 74092567 - MGP_LPJ_P0055218 Atp5g3 protein_coding protein_coding MGP_LPJ_T0055219.1 MGP_LPJ_G0025774.1 mouse_genomes_project 2 74089972 74092524 - Atp5g3 protein_coding processed_transcript MGP_LPJ_T0055220.1 MGP_LPJ_G0025774.1 mouse_genomes_project 2 74090424 74091701 - Atp5g3 protein_coding processed_transcript MGP_LPJ_T0055221.1 MGP_LPJ_G0025774.1 mouse_genomes_project 2 74090559 74092533 - Atp5g3 protein_coding processed_transcript MGP_LPJ_T0053905.1 MGP_LPJ_G0025530.1 mouse_genomes_project 2 30564391 30570915 - MGP_LPJ_P0053905 Uck1 protein_coding protein_coding MGP_LPJ_T0053906.1 MGP_LPJ_G0025530.1 mouse_genomes_project 2 30566645 30570021 - MGP_LPJ_P0053906 Uck1 protein_coding protein_coding MGP_LPJ_T0053907.1 MGP_LPJ_G0025530.1 mouse_genomes_project 2 30568223 30570010 - Uck1 protein_coding retained_intron MGP_LPJ_T0053908.1 MGP_LPJ_G0025530.1 mouse_genomes_project 2 30568472 30575087 - Uck1 protein_coding retained_intron MGP_LPJ_T0011542.1 MGP_LPJ_G0009660.1 mouse_genomes_project 2 187402894 187403012 + Gm22842 misc_RNA misc_RNA MGP_LPJ_T0052573.1 MGP_LPJ_G0025301.1 mouse_genomes_project 2 15536890 15537416 - MGP_LPJ_P0052573 Gm14501 protein_coding protein_coding MGP_LPJ_T0004090.1 MGP_LPJ_G0003628.1 mouse_genomes_project 2 128617227 128627194 - Gm14002 antisense antisense MGP_LPJ_T0010391.1 MGP_LPJ_G0008509.1 mouse_genomes_project 2 7789694 7789784 + Gm24806 miRNA miRNA MGP_LPJ_T0056494.1 MGP_LPJ_G0026186.1 mouse_genomes_project 2 113200588 113521121 - MGP_LPJ_P0056494 Ano3 protein_coding protein_coding MGP_LPJ_T0056495.1 MGP_LPJ_G0026186.1 mouse_genomes_project 2 113235818 113520571 - Ano3 protein_coding retained_intron MGP_LPJ_T0056496.1 MGP_LPJ_G0026186.1 mouse_genomes_project 2 113260581 113316117 - MGP_LPJ_P0056496 Ano3 protein_coding protein_coding MGP_LPJ_T0055565.1 MGP_LPJ_G0025859.1 mouse_genomes_project 2 86017001 86055606 - MGP_LPJ_P0055565 4833423E24Rik protein_coding protein_coding MGP_LPJ_T0013794.1 MGP_LPJ_G0011885.1 mouse_genomes_project 2 161327116 161328806 + processed_pseudogene processed_pseudogene MGP_LPJ_T0058176.1 MGP_LPJ_G0026609.1 mouse_genomes_project 2 157347932 157361581 + MGP_LPJ_P0058176 Rem1 protein_coding protein_coding MGP_LPJ_T0058177.1 MGP_LPJ_G0026609.1 mouse_genomes_project 2 157347934 157349283 + MGP_LPJ_P0058177 Rem1 protein_coding protein_coding MGP_LPJ_T0058178.1 MGP_LPJ_G0026609.1 mouse_genomes_project 2 157353938 157361585 + Rem1 protein_coding retained_intron MGP_LPJ_T0052980.1 MGP_LPJ_G0025374.1 mouse_genomes_project 2 23223744 23229192 + MGP_LPJ_P0052980 Entpd2 protein_coding protein_coding MGP_LPJ_T0052981.1 MGP_LPJ_G0025374.1 mouse_genomes_project 2 23223786 23229163 + Entpd2 protein_coding processed_transcript MGP_LPJ_T0052982.1 MGP_LPJ_G0025374.1 mouse_genomes_project 2 23226623 23227720 + Entpd2 protein_coding processed_transcript MGP_LPJ_T0004092.1 MGP_LPJ_G0003630.1 mouse_genomes_project 2 130162243 130170016 + Gm27003 antisense antisense MGP_LPJ_T0054573.1 MGP_LPJ_G0025655.1 mouse_genomes_project 2 48910493 49076916 + MGP_LPJ_P0054573 Lypd6b protein_coding protein_coding MGP_LPJ_T0054574.1 MGP_LPJ_G0025655.1 mouse_genomes_project 2 48910536 48993444 + Lypd6b protein_coding processed_transcript MGP_LPJ_T0054575.1 MGP_LPJ_G0025655.1 mouse_genomes_project 2 48968444 49068761 + Lypd6b protein_coding processed_transcript MGP_LPJ_T0055235.1 MGP_LPJ_G0025777.1 mouse_genomes_project 2 74846645 74849933 + MGP_LPJ_P0055235 Hoxd13 protein_coding protein_coding MGP_LPJ_T0055648.1 MGP_LPJ_G0025931.1 mouse_genomes_project 2 88032545 88033484 - MGP_LPJ_P0055648 Olfr1105 protein_coding protein_coding MGP_LPJ_T0054935.1 MGP_LPJ_G0025722.1 mouse_genomes_project 2 67969312 68246238 - MGP_LPJ_P0054935 Stk39 protein_coding protein_coding MGP_LPJ_T0054936.1 MGP_LPJ_G0025722.1 mouse_genomes_project 2 67969315 68133371 - Stk39 protein_coding retained_intron MGP_LPJ_T0054937.1 MGP_LPJ_G0025722.1 mouse_genomes_project 2 67970607 67983801 - Stk39 protein_coding processed_transcript MGP_LPJ_T0054938.1 MGP_LPJ_G0025722.1 mouse_genomes_project 2 67970607 68012290 - Stk39 protein_coding processed_transcript MGP_LPJ_T0054939.1 MGP_LPJ_G0025722.1 mouse_genomes_project 2 67970607 68012295 - Stk39 protein_coding processed_transcript MGP_LPJ_T0054940.1 MGP_LPJ_G0025722.1 mouse_genomes_project 2 67970614 68012268 - Stk39 protein_coding processed_transcript MGP_LPJ_T0054941.1 MGP_LPJ_G0025722.1 mouse_genomes_project 2 68024868 68245910 - Stk39 protein_coding retained_intron MGP_LPJ_T0054942.1 MGP_LPJ_G0025722.1 mouse_genomes_project 2 68124277 68154628 - Stk39 protein_coding processed_transcript MGP_LPJ_T0017865.1 MGP_LPJ_G0015409.1 mouse_genomes_project 2 178028559 178035569 - 1700028P15Rik processed_transcript lincRNA MGP_LPJ_T0017866.1 MGP_LPJ_G0015409.1 mouse_genomes_project 2 178029866 178034904 - 1700028P15Rik processed_transcript lincRNA MGP_LPJ_T0017867.1 MGP_LPJ_G0015409.1 mouse_genomes_project 2 178029867 178035594 - 1700028P15Rik processed_transcript retained_intron MGP_LPJ_T0004107.1 MGP_LPJ_G0003640.1 mouse_genomes_project 2 135418922 135491958 - Gm14280 antisense antisense MGP_LPJ_T0059462.1 MGP_LPJ_G0026901.1 mouse_genomes_project 2 180695133 180707930 - MGP_LPJ_P0059462 Ctsz protein_coding protein_coding MGP_LPJ_T0003911.1 MGP_LPJ_G0003500.1 mouse_genomes_project 2 9646130 9657965 + E030013I19Rik antisense antisense MGP_LPJ_T0003912.1 MGP_LPJ_G0003500.1 mouse_genomes_project 2 9646503 9658980 + E030013I19Rik antisense antisense MGP_LPJ_T0010477.1 MGP_LPJ_G0008595.1 mouse_genomes_project 2 131432330 131432456 + Gm22411 miRNA miRNA MGP_LPJ_T0010442.1 MGP_LPJ_G0008560.1 mouse_genomes_project 2 74879312 74879449 - Gm44463 miRNA miRNA MGP_LPJ_T0053835.1 MGP_LPJ_G0025519.1 mouse_genomes_project 2 29918802 29929708 + MGP_LPJ_P0053835 Exosc2 protein_coding protein_coding MGP_LPJ_T0053836.1 MGP_LPJ_G0025519.1 mouse_genomes_project 2 29918806 29929395 + Exosc2 protein_coding retained_intron MGP_LPJ_T0053837.1 MGP_LPJ_G0025519.1 mouse_genomes_project 2 29918821 29928934 + MGP_LPJ_P0053837 Exosc2 protein_coding protein_coding MGP_LPJ_T0053838.1 MGP_LPJ_G0025519.1 mouse_genomes_project 2 29918830 29926882 + MGP_LPJ_P0053838 Exosc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0053839.1 MGP_LPJ_G0025519.1 mouse_genomes_project 2 29921668 29926955 + Exosc2 protein_coding processed_transcript MGP_LPJ_T0053840.1 MGP_LPJ_G0025519.1 mouse_genomes_project 2 29926705 29928927 + Exosc2 protein_coding retained_intron MGP_LPJ_T0099369.1 MGP_LPJ_G0037632.1 mouse_genomes_project 2 172475993 172476096 + Gm24477 snRNA snRNA MGP_LPJ_T0056986.1 MGP_LPJ_G0026317.1 mouse_genomes_project 2 124269513 124281838 - MGP_LPJ_P0056986 Lcmt2 protein_coding protein_coding MGP_LPJ_T0056987.1 MGP_LPJ_G0026317.1 mouse_genomes_project 2 124279057 124282113 - MGP_LPJ_P0056987 Lcmt2 protein_coding protein_coding MGP_LPJ_T0001135.1 MGP_LPJ_G0001059.1 mouse_genomes_project 2 175576791 175581054 - TEC TEC MGP_LPJ_T0054184.1 MGP_LPJ_G0025571.1 mouse_genomes_project 2 33294940 33300518 + MGP_LPJ_P0054184 Hspa5 protein_coding protein_coding MGP_LPJ_T0054185.1 MGP_LPJ_G0025571.1 mouse_genomes_project 2 33295065 33299502 + MGP_LPJ_P0054185 Hspa5 protein_coding protein_coding MGP_LPJ_T0054186.1 MGP_LPJ_G0025571.1 mouse_genomes_project 2 33295069 33296278 + MGP_LPJ_P0054186 Hspa5 protein_coding nonsense_mediated_decay MGP_LPJ_T0054187.1 MGP_LPJ_G0025571.1 mouse_genomes_project 2 33295551 33297163 + Hspa5 protein_coding retained_intron MGP_LPJ_T0054188.1 MGP_LPJ_G0025571.1 mouse_genomes_project 2 33296636 33297304 + Hspa5 protein_coding retained_intron MGP_LPJ_T0054189.1 MGP_LPJ_G0025571.1 mouse_genomes_project 2 33297817 33298586 + Hspa5 protein_coding retained_intron MGP_LPJ_T0058667.1 MGP_LPJ_G0026708.1 mouse_genomes_project 2 161920091 161940926 - MGP_LPJ_P0058667 Sla2 protein_coding protein_coding MGP_LPJ_T0058669.1 MGP_LPJ_G0026708.1 mouse_genomes_project 2 161920556 161941040 - MGP_LPJ_P0058669 Sla2 protein_coding protein_coding MGP_LPJ_T0001089.1 MGP_LPJ_G0001014.1 mouse_genomes_project 2 22658040 22659838 - TEC TEC MGP_LPJ_T0055771.1 MGP_LPJ_G0026036.1 mouse_genomes_project 2 90717259 90718177 - MGP_LPJ_P0055771 Olfr1239 protein_coding protein_coding MGP_LPJ_T0055627.1 MGP_LPJ_G0025911.1 mouse_genomes_project 2 87353785 87354754 - MGP_LPJ_P0055627 Olfr228 protein_coding protein_coding MGP_LPJ_T0013446.1 MGP_LPJ_G0011537.1 mouse_genomes_project 2 30588760 30589078 + processed_pseudogene processed_pseudogene MGP_LPJ_T0059373.1 MGP_LPJ_G0026878.1 mouse_genomes_project 2 178496042 178533817 + MGP_LPJ_P0059373 Cass4 protein_coding protein_coding MGP_LPJ_T0059374.1 MGP_LPJ_G0026878.1 mouse_genomes_project 2 178496069 178538017 + MGP_LPJ_P0059374 Cass4 protein_coding protein_coding MGP_LPJ_T0059375.1 MGP_LPJ_G0026878.1 mouse_genomes_project 2 178496148 178537121 + MGP_LPJ_P0059375 Cass4 protein_coding protein_coding MGP_LPJ_T0059376.1 MGP_LPJ_G0026878.1 mouse_genomes_project 2 178496218 178536904 + MGP_LPJ_P0059376 Cass4 protein_coding unknown_likely_coding MGP_LPJ_T0057992.1 MGP_LPJ_G0026545.1 mouse_genomes_project 2 152895110 152902026 - MGP_LPJ_P0057992 Cd93 protein_coding protein_coding MGP_LPJ_T0054426.1 MGP_LPJ_G0025636.1 mouse_genomes_project 2 37370285 37590565 - MGP_LPJ_P0054426 Nr6a1 protein_coding protein_coding MGP_LPJ_T0054427.1 MGP_LPJ_G0025636.1 mouse_genomes_project 2 37370289 37589120 - MGP_LPJ_P0054427 Nr6a1 protein_coding protein_coding MGP_LPJ_T0054428.1 MGP_LPJ_G0025636.1 mouse_genomes_project 2 37370289 37435528 - MGP_LPJ_P0054428 Nr6a1 protein_coding protein_coding MGP_LPJ_T0054429.1 MGP_LPJ_G0025636.1 mouse_genomes_project 2 37385925 37388793 - Nr6a1 protein_coding processed_transcript MGP_LPJ_T0054430.1 MGP_LPJ_G0025636.1 mouse_genomes_project 2 37387055 37391286 - Nr6a1 protein_coding processed_transcript MGP_LPJ_T0054431.1 MGP_LPJ_G0025636.1 mouse_genomes_project 2 37387463 37435533 - MGP_LPJ_P0054431 Nr6a1 protein_coding protein_coding MGP_LPJ_T0054432.1 MGP_LPJ_G0025636.1 mouse_genomes_project 2 37388752 37436124 - Nr6a1 protein_coding processed_transcript MGP_LPJ_T0054433.1 MGP_LPJ_G0025636.1 mouse_genomes_project 2 37388871 37589178 - MGP_LPJ_P0054433 Nr6a1 protein_coding protein_coding MGP_LPJ_T0054434.1 MGP_LPJ_G0025636.1 mouse_genomes_project 2 37390769 37435482 - Nr6a1 protein_coding processed_transcript MGP_LPJ_T0054435.1 MGP_LPJ_G0025636.1 mouse_genomes_project 2 37391285 37414145 - Nr6a1 protein_coding retained_intron MGP_LPJ_T0054436.1 MGP_LPJ_G0025636.1 mouse_genomes_project 2 37432941 37435482 - Nr6a1 protein_coding processed_transcript MGP_LPJ_T0055446.1 MGP_LPJ_G0025826.1 mouse_genomes_project 2 84432225 84455714 - MGP_LPJ_P0055446 Zswim2 protein_coding protein_coding MGP_LPJ_T0055447.1 MGP_LPJ_G0025826.1 mouse_genomes_project 2 84433915 84455716 - MGP_LPJ_P0055447 Zswim2 protein_coding protein_coding MGP_LPJ_T0055448.1 MGP_LPJ_G0025826.1 mouse_genomes_project 2 84440202 84442119 - Zswim2 protein_coding processed_transcript MGP_LPJ_T0053259.1 MGP_LPJ_G0025424.1 mouse_genomes_project 2 24497908 24508991 - Agpat2 protein_coding processed_transcript MGP_LPJ_T0053260.1 MGP_LPJ_G0025424.1 mouse_genomes_project 2 24497908 24509112 - MGP_LPJ_P0053260 Agpat2 protein_coding protein_coding MGP_LPJ_T0053261.1 MGP_LPJ_G0025424.1 mouse_genomes_project 2 24499354 24509197 - Agpat2 protein_coding processed_transcript MGP_LPJ_T0053262.1 MGP_LPJ_G0025424.1 mouse_genomes_project 2 24500969 24508496 - Agpat2 protein_coding processed_transcript MGP_LPJ_T0053263.1 MGP_LPJ_G0025424.1 mouse_genomes_project 2 24501292 24508706 - MGP_LPJ_P0053263 Agpat2 protein_coding protein_coding MGP_LPJ_T0007440.1 MGP_LPJ_G0006103.1 mouse_genomes_project 2 178060890 178061891 - Gm14272 lincRNA lincRNA MGP_LPJ_T0055400.1 MGP_LPJ_G0025815.1 mouse_genomes_project 2 80750326 80759666 + Dnajc10 protein_coding processed_transcript MGP_LPJ_T0055401.1 MGP_LPJ_G0025815.1 mouse_genomes_project 2 80750326 80789566 + MGP_LPJ_P0055401 Dnajc10 protein_coding protein_coding MGP_LPJ_T0055402.1 MGP_LPJ_G0025815.1 mouse_genomes_project 2 80766919 80769280 + Dnajc10 protein_coding processed_transcript MGP_LPJ_T0055403.1 MGP_LPJ_G0025815.1 mouse_genomes_project 2 80769179 80776439 + Dnajc10 protein_coding processed_transcript MGP_LPJ_T0055404.1 MGP_LPJ_G0025815.1 mouse_genomes_project 2 80783212 80786500 + Dnajc10 protein_coding processed_transcript MGP_LPJ_T0102075.1 MGP_LPJ_G0040112.1 mouse_genomes_project 2 161327117 161328848 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013584.1 MGP_LPJ_G0011675.1 mouse_genomes_project 2 79747913 79748444 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001106.1 MGP_LPJ_G0001031.1 mouse_genomes_project 2 37509799 37512969 - TEC TEC MGP_LPJ_T0013459.1 MGP_LPJ_G0011550.1 mouse_genomes_project 2 35662143 35672919 - processed_pseudogene processed_pseudogene MGP_LPJ_T0054345.1 MGP_LPJ_G0025609.1 mouse_genomes_project 2 35455420 35456368 + MGP_LPJ_P0054345 Olfr352 protein_coding protein_coding MGP_LPJ_T0100559.1 MGP_LPJ_G0038822.1 mouse_genomes_project 2 7305460 7305588 - Gm23608 snoRNA snoRNA MGP_LPJ_T0053755.1 MGP_LPJ_G0025507.1 mouse_genomes_project 2 29084333 29099395 - MGP_LPJ_P0053755 Ptges protein_coding protein_coding MGP_LPJ_T0053756.1 MGP_LPJ_G0025507.1 mouse_genomes_project 2 29087144 29097891 - Ptges protein_coding processed_transcript MGP_LPJ_T0053757.1 MGP_LPJ_G0025507.1 mouse_genomes_project 2 29087158 29128341 - Ptges protein_coding processed_transcript MGP_LPJ_T0053758.1 MGP_LPJ_G0025507.1 mouse_genomes_project 2 29087350 29092330 - Ptges protein_coding processed_transcript MGP_LPJ_T0007147.1 MGP_LPJ_G0005867.1 mouse_genomes_project 2 6529387 6586014 + Gm13219 lincRNA lincRNA MGP_LPJ_T0007148.1 MGP_LPJ_G0005867.1 mouse_genomes_project 2 6529446 6624638 + Gm13219 lincRNA lincRNA MGP_LPJ_T0007149.1 MGP_LPJ_G0005867.1 mouse_genomes_project 2 6529476 6587375 + Gm13219 lincRNA lincRNA MGP_LPJ_T0001075.1 MGP_LPJ_G0001000.1 mouse_genomes_project 2 11459564 11462163 - TEC TEC MGP_LPJ_T0054856.1 MGP_LPJ_G0025707.1 mouse_genomes_project 2 64502316 64504879 - Grb14 protein_coding processed_transcript MGP_LPJ_T0054857.1 MGP_LPJ_G0025707.1 mouse_genomes_project 2 64502316 64507175 - MGP_LPJ_P0054857 Grb14 protein_coding protein_coding MGP_LPJ_T0054858.1 MGP_LPJ_G0025707.1 mouse_genomes_project 2 64502316 64620048 - MGP_LPJ_P0054858 Grb14 protein_coding protein_coding MGP_LPJ_T0054859.1 MGP_LPJ_G0025707.1 mouse_genomes_project 2 64502316 64507100 - MGP_LPJ_P0054859 Grb14 protein_coding protein_coding MGP_LPJ_T0054860.1 MGP_LPJ_G0025707.1 mouse_genomes_project 2 64519301 64525015 - Grb14 protein_coding processed_transcript MGP_LPJ_T0054861.1 MGP_LPJ_G0025707.1 mouse_genomes_project 2 64520767 64568802 - MGP_LPJ_P0054861 Grb14 protein_coding protein_coding MGP_LPJ_T0054862.1 MGP_LPJ_G0025707.1 mouse_genomes_project 2 64526863 64568779 - Grb14 protein_coding processed_transcript MGP_LPJ_T0054863.1 MGP_LPJ_G0025707.1 mouse_genomes_project 2 64619933 64625350 - Grb14 protein_coding processed_transcript MGP_LPJ_T0055275.1 MGP_LPJ_G0025795.1 mouse_genomes_project 2 76630201 76636811 - MGP_LPJ_P0055275 Cyct protein_coding protein_coding MGP_LPJ_T0013573.1 MGP_LPJ_G0011664.1 mouse_genomes_project 2 77564651 77565065 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003998.1 MGP_LPJ_G0003566.1 mouse_genomes_project 2 65148827 65152170 + Gm13595 antisense antisense MGP_LPJ_T0013630.1 MGP_LPJ_G0011721.1 mouse_genomes_project 2 93851159 93851492 + processed_pseudogene processed_pseudogene MGP_LPJ_T0058852.1 MGP_LPJ_G0026746.1 mouse_genomes_project 2 166862774 168059651 - MGP_LPJ_P0058852 Ptprt protein_coding protein_coding MGP_LPJ_T0058853.1 MGP_LPJ_G0026746.1 mouse_genomes_project 2 166862774 168059651 - MGP_LPJ_P0058853 Ptprt protein_coding protein_coding MGP_LPJ_T0058854.1 MGP_LPJ_G0026746.1 mouse_genomes_project 2 166869368 168059598 - MGP_LPJ_P0058854 Ptprt protein_coding protein_coding MGP_LPJ_T0058855.1 MGP_LPJ_G0026746.1 mouse_genomes_project 2 166870541 168059651 - MGP_LPJ_P0058855 Ptprt protein_coding protein_coding MGP_LPJ_T0058856.1 MGP_LPJ_G0026746.1 mouse_genomes_project 2 167042310 167156779 - Ptprt protein_coding processed_transcript MGP_LPJ_T0058857.1 MGP_LPJ_G0026746.1 mouse_genomes_project 2 167382626 167515661 - Ptprt protein_coding processed_transcript MGP_LPJ_T0058706.1 MGP_LPJ_G0026717.1 mouse_genomes_project 2 162509993 162568913 + MGP_LPJ_P0058706 Src protein_coding protein_coding MGP_LPJ_T0058707.1 MGP_LPJ_G0026717.1 mouse_genomes_project 2 162515664 162552170 + Src protein_coding processed_transcript MGP_LPJ_T0058708.1 MGP_LPJ_G0026717.1 mouse_genomes_project 2 162515828 162568940 + MGP_LPJ_P0058708 Src protein_coding protein_coding MGP_LPJ_T0058709.1 MGP_LPJ_G0026717.1 mouse_genomes_project 2 162515841 162568916 + MGP_LPJ_P0058709 Src protein_coding protein_coding MGP_LPJ_T0058710.1 MGP_LPJ_G0026717.1 mouse_genomes_project 2 162515940 162555679 + Src protein_coding processed_transcript MGP_LPJ_T0058711.1 MGP_LPJ_G0026717.1 mouse_genomes_project 2 162515940 162552069 + Src protein_coding processed_transcript MGP_LPJ_T0058712.1 MGP_LPJ_G0026717.1 mouse_genomes_project 2 162552133 162568916 + MGP_LPJ_P0058712 Src protein_coding protein_coding MGP_LPJ_T0058713.1 MGP_LPJ_G0026717.1 mouse_genomes_project 2 162553555 162567436 + MGP_LPJ_P0058713 Src protein_coding protein_coding MGP_LPJ_T0013712.1 MGP_LPJ_G0011803.1 mouse_genomes_project 2 132131620 132132601 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055003.1 MGP_LPJ_G0025736.1 mouse_genomes_project 2 69597858 69630433 - MGP_LPJ_P0055003 Ccdc173 protein_coding protein_coding MGP_LPJ_T0055004.1 MGP_LPJ_G0025736.1 mouse_genomes_project 2 69621758 69622816 - Ccdc173 protein_coding processed_transcript MGP_LPJ_T0013833.1 MGP_LPJ_G0011924.1 mouse_genomes_project 2 180234291 180234501 - processed_pseudogene processed_pseudogene MGP_LPJ_T0059176.1 MGP_LPJ_G0026833.1 mouse_genomes_project 2 171634461 171718005 + MGP_LPJ_P0059176 Ncoa3 protein_coding protein_coding MGP_LPJ_T0059177.1 MGP_LPJ_G0026833.1 mouse_genomes_project 2 171634462 171720738 + MGP_LPJ_P0059177 Ncoa3 protein_coding protein_coding MGP_LPJ_T0059178.1 MGP_LPJ_G0026833.1 mouse_genomes_project 2 171693480 171697943 + Ncoa3 protein_coding processed_transcript MGP_LPJ_T0059179.1 MGP_LPJ_G0026833.1 mouse_genomes_project 2 171706337 171711711 + Ncoa3 protein_coding retained_intron MGP_LPJ_T0059180.1 MGP_LPJ_G0026833.1 mouse_genomes_project 2 171712958 171716738 + Ncoa3 protein_coding retained_intron MGP_LPJ_T0007141.1 MGP_LPJ_G0005862.1 mouse_genomes_project 2 3581244 3587864 + Gm13391 lincRNA lincRNA MGP_LPJ_T0007142.1 MGP_LPJ_G0005862.1 mouse_genomes_project 2 3581515 3582356 + Gm13391 lincRNA lincRNA MGP_LPJ_T0098527.1 MGP_LPJ_G0036802.1 mouse_genomes_project 2 117772986 117774005 + Gm28492 sense_intronic sense_intronic MGP_LPJ_T0059725.1 MGP_LPJ_G0026958.1 mouse_genomes_project 2 188119843 188137889 + MGP_LPJ_P0059725 Tpd52l2 protein_coding nonsense_mediated_decay MGP_LPJ_T0059726.1 MGP_LPJ_G0026958.1 mouse_genomes_project 2 188119865 188131025 + Tpd52l2 protein_coding processed_transcript MGP_LPJ_T0059727.1 MGP_LPJ_G0026958.1 mouse_genomes_project 2 188119866 188140740 + MGP_LPJ_P0059727 Tpd52l2 protein_coding protein_coding MGP_LPJ_T0059728.1 MGP_LPJ_G0026958.1 mouse_genomes_project 2 188119882 188140145 + MGP_LPJ_P0059728 Tpd52l2 protein_coding protein_coding MGP_LPJ_T0059729.1 MGP_LPJ_G0026958.1 mouse_genomes_project 2 188119884 188137900 + MGP_LPJ_P0059729 Tpd52l2 protein_coding protein_coding MGP_LPJ_T0059730.1 MGP_LPJ_G0026958.1 mouse_genomes_project 2 188119888 188140736 + MGP_LPJ_P0059730 Tpd52l2 protein_coding protein_coding MGP_LPJ_T0059731.1 MGP_LPJ_G0026958.1 mouse_genomes_project 2 188119900 188139030 + MGP_LPJ_P0059731 Tpd52l2 protein_coding protein_coding MGP_LPJ_T0059732.1 MGP_LPJ_G0026958.1 mouse_genomes_project 2 188119930 188125377 + Tpd52l2 protein_coding retained_intron MGP_LPJ_T0059733.1 MGP_LPJ_G0026958.1 mouse_genomes_project 2 188119932 188138161 + MGP_LPJ_P0059733 Tpd52l2 protein_coding protein_coding MGP_LPJ_T0059734.1 MGP_LPJ_G0026958.1 mouse_genomes_project 2 188122669 188135820 + MGP_LPJ_P0059734 Tpd52l2 protein_coding protein_coding MGP_LPJ_T0059735.1 MGP_LPJ_G0026958.1 mouse_genomes_project 2 188122690 188125973 + Tpd52l2 protein_coding retained_intron MGP_LPJ_T0059736.1 MGP_LPJ_G0026958.1 mouse_genomes_project 2 188135341 188138107 + Tpd52l2 protein_coding retained_intron MGP_LPJ_T0054332.1 MGP_LPJ_G0025597.1 mouse_genomes_project 2 35052526 35053465 + MGP_LPJ_P0054332 Olfr340 protein_coding protein_coding MGP_LPJ_T0054099.1 MGP_LPJ_G0025559.1 mouse_genomes_project 2 31347838 31351934 + MGP_LPJ_P0054099 Rpl12 protein_coding protein_coding MGP_LPJ_T0054100.1 MGP_LPJ_G0025559.1 mouse_genomes_project 2 31347999 31352783 + Rpl12 protein_coding retained_intron MGP_LPJ_T0054101.1 MGP_LPJ_G0025559.1 mouse_genomes_project 2 31348008 31351483 + Rpl12 protein_coding retained_intron MGP_LPJ_T0054102.1 MGP_LPJ_G0025559.1 mouse_genomes_project 2 31348011 31349341 + Rpl12 protein_coding retained_intron MGP_LPJ_T0054103.1 MGP_LPJ_G0025559.1 mouse_genomes_project 2 31348019 31350687 + Rpl12 protein_coding retained_intron MGP_LPJ_T0054104.1 MGP_LPJ_G0025559.1 mouse_genomes_project 2 31348019 31351481 + MGP_LPJ_P0054104 Rpl12 protein_coding nonsense_mediated_decay MGP_LPJ_T0054105.1 MGP_LPJ_G0025559.1 mouse_genomes_project 2 31348545 31349469 + Rpl12 protein_coding retained_intron MGP_LPJ_T0055662.1 MGP_LPJ_G0025945.1 mouse_genomes_project 2 88443761 88444742 + MGP_LPJ_P0055662 Olfr1122 protein_coding protein_coding MGP_LPJ_T0007323.1 MGP_LPJ_G0006006.1 mouse_genomes_project 2 120796137 120801816 - Gm13985 lincRNA lincRNA MGP_LPJ_T0057486.1 MGP_LPJ_G0026430.1 mouse_genomes_project 2 133476608 133505210 + MGP_LPJ_P0057486 Stk35 protein_coding protein_coding MGP_LPJ_T0057487.1 MGP_LPJ_G0026430.1 mouse_genomes_project 2 133476608 133508532 + MGP_LPJ_P0057487 Stk35 protein_coding protein_coding MGP_LPJ_T0017698.1 MGP_LPJ_G0015321.1 mouse_genomes_project 2 25478719 25481656 + Gm13421 processed_transcript processed_transcript MGP_LPJ_T0017699.1 MGP_LPJ_G0015321.1 mouse_genomes_project 2 25478722 25481479 + Gm13421 processed_transcript processed_transcript MGP_LPJ_T0010382.1 MGP_LPJ_G0008500.1 mouse_genomes_project 2 7785208 7785306 + Mir669m-1 miRNA miRNA MGP_LPJ_T0102023.1 MGP_LPJ_G0040060.1 mouse_genomes_project 2 85922743 85923639 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013798.1 MGP_LPJ_G0011889.1 mouse_genomes_project 2 161664511 161665151 - processed_pseudogene processed_pseudogene MGP_LPJ_T0058730.1 MGP_LPJ_G0026720.1 mouse_genomes_project 2 162850895 163011917 + MGP_LPJ_P0058730 Ctnnbl1 protein_coding protein_coding MGP_LPJ_T0058731.1 MGP_LPJ_G0026720.1 mouse_genomes_project 2 162902649 162921042 + Ctnnbl1 protein_coding processed_transcript MGP_LPJ_T0058732.1 MGP_LPJ_G0026720.1 mouse_genomes_project 2 162904065 162932540 + Ctnnbl1 protein_coding processed_transcript MGP_LPJ_T0058733.1 MGP_LPJ_G0026720.1 mouse_genomes_project 2 162904098 162951071 + Ctnnbl1 protein_coding processed_transcript MGP_LPJ_T0057520.1 MGP_LPJ_G0026439.1 mouse_genomes_project 2 134116281 134119338 + MGP_LPJ_P0057520 Gm28372 protein_coding protein_coding MGP_LPJ_T0001059.1 MGP_LPJ_G0000984.1 mouse_genomes_project 2 8648696 8649585 + TEC TEC MGP_LPJ_T0013685.1 MGP_LPJ_G0011776.1 mouse_genomes_project 2 114354512 114354668 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007245.1 MGP_LPJ_G0005944.1 mouse_genomes_project 2 74493834 74502586 - 4930441J16Rik lincRNA lincRNA MGP_LPJ_T0013662.1 MGP_LPJ_G0011753.1 mouse_genomes_project 2 106757894 106758917 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100577.1 MGP_LPJ_G0038840.1 mouse_genomes_project 2 31611084 31611221 - Gm23546 snoRNA snoRNA MGP_LPJ_T0013779.1 MGP_LPJ_G0011870.1 mouse_genomes_project 2 156363863 156364315 - processed_pseudogene processed_pseudogene MGP_LPJ_T0054945.1 MGP_LPJ_G0025724.1 mouse_genomes_project 2 68437270 68470018 + MGP_LPJ_P0054945 4932414N04Rik protein_coding protein_coding MGP_LPJ_T0054946.1 MGP_LPJ_G0025724.1 mouse_genomes_project 2 68438657 68527790 + MGP_LPJ_P0054946 4932414N04Rik protein_coding protein_coding MGP_LPJ_T0054947.1 MGP_LPJ_G0025724.1 mouse_genomes_project 2 68438686 68450245 + 4932414N04Rik protein_coding processed_transcript MGP_LPJ_T0054948.1 MGP_LPJ_G0025724.1 mouse_genomes_project 2 68441297 68527788 + MGP_LPJ_P0054948 4932414N04Rik protein_coding protein_coding MGP_LPJ_T0054949.1 MGP_LPJ_G0025724.1 mouse_genomes_project 2 68501378 68502388 + 4932414N04Rik protein_coding retained_intron MGP_LPJ_T0055053.1 MGP_LPJ_G0025747.1 mouse_genomes_project 2 70569227 70621024 + MGP_LPJ_P0055053 Gorasp2 protein_coding protein_coding MGP_LPJ_T0055054.1 MGP_LPJ_G0025747.1 mouse_genomes_project 2 70569227 70599383 + MGP_LPJ_P0055054 Gorasp2 protein_coding protein_coding MGP_LPJ_T0055055.1 MGP_LPJ_G0025747.1 mouse_genomes_project 2 70569227 70599365 + MGP_LPJ_P0055055 Gorasp2 protein_coding protein_coding MGP_LPJ_T0055056.1 MGP_LPJ_G0025747.1 mouse_genomes_project 2 70569241 70597000 + MGP_LPJ_P0055056 Gorasp2 protein_coding protein_coding MGP_LPJ_T0055057.1 MGP_LPJ_G0025747.1 mouse_genomes_project 2 70569851 70585590 + Gorasp2 protein_coding processed_transcript MGP_LPJ_T0055058.1 MGP_LPJ_G0025747.1 mouse_genomes_project 2 70595452 70599361 + Gorasp2 protein_coding processed_transcript MGP_LPJ_T0099326.1 MGP_LPJ_G0037589.1 mouse_genomes_project 2 37114935 37115043 + Gm25081 snRNA snRNA MGP_LPJ_T0007250.1 MGP_LPJ_G0005947.1 mouse_genomes_project 2 74930916 74931977 + Gm14424 lincRNA lincRNA MGP_LPJ_T0101310.1 MGP_LPJ_G0039530.1 mouse_genomes_project 2 134527223 134527705 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0099317.1 MGP_LPJ_G0037580.1 mouse_genomes_project 2 22799176 22799283 - Gm25518 snRNA snRNA MGP_LPJ_T0052450.1 MGP_LPJ_G0025280.1 mouse_genomes_project 2 9450459 9647107 - MGP_LPJ_P0052450 Itga8 protein_coding protein_coding MGP_LPJ_T0052451.1 MGP_LPJ_G0025280.1 mouse_genomes_project 2 9451306 9647077 - MGP_LPJ_P0052451 Itga8 protein_coding nonsense_mediated_decay MGP_LPJ_T0052452.1 MGP_LPJ_G0025280.1 mouse_genomes_project 2 9452897 9476354 - MGP_LPJ_P0052452 Itga8 protein_coding protein_coding MGP_LPJ_T0052453.1 MGP_LPJ_G0025280.1 mouse_genomes_project 2 9523415 9534053 - Itga8 protein_coding retained_intron MGP_LPJ_T0052454.1 MGP_LPJ_G0025280.1 mouse_genomes_project 2 9563503 9587475 - Itga8 protein_coding processed_transcript MGP_LPJ_T0052455.1 MGP_LPJ_G0025280.1 mouse_genomes_project 2 9594814 9647107 - Itga8 protein_coding retained_intron MGP_LPJ_T0052456.1 MGP_LPJ_G0025280.1 mouse_genomes_project 2 9632148 9646773 - Itga8 protein_coding processed_transcript MGP_LPJ_T0056530.1 MGP_LPJ_G0026217.1 mouse_genomes_project 2 114737244 114738183 - MGP_LPJ_P0056530 Olfr1314 protein_coding protein_coding MGP_LPJ_T0052951.1 MGP_LPJ_G0025370.1 mouse_genomes_project 2 23151027 23161804 + MGP_LPJ_P0052951 Man1b1 protein_coding protein_coding MGP_LPJ_T0052952.1 MGP_LPJ_G0025370.1 mouse_genomes_project 2 23151418 23171785 + MGP_LPJ_P0052952 Man1b1 protein_coding protein_coding MGP_LPJ_T0052953.1 MGP_LPJ_G0025370.1 mouse_genomes_project 2 23151451 23163072 + Man1b1 protein_coding processed_transcript MGP_LPJ_T0052954.1 MGP_LPJ_G0025370.1 mouse_genomes_project 2 23151462 23156859 + Man1b1 protein_coding processed_transcript MGP_LPJ_T0052955.1 MGP_LPJ_G0025370.1 mouse_genomes_project 2 23156802 23163786 + Man1b1 protein_coding processed_transcript MGP_LPJ_T0052956.1 MGP_LPJ_G0025370.1 mouse_genomes_project 2 23163520 23164224 + Man1b1 protein_coding processed_transcript MGP_LPJ_T0001129.1 MGP_LPJ_G0001053.1 mouse_genomes_project 2 132816568 132817609 - TEC TEC MGP_LPJ_T0057483.1 MGP_LPJ_G0026429.1 mouse_genomes_project 2 133350577 133363858 - MGP_LPJ_P0057483 Pdyn protein_coding protein_coding MGP_LPJ_T0057484.1 MGP_LPJ_G0026429.1 mouse_genomes_project 2 133352508 133362683 - MGP_LPJ_P0057484 Pdyn protein_coding protein_coding MGP_LPJ_T0057485.1 MGP_LPJ_G0026429.1 mouse_genomes_project 2 133362010 133363869 - Pdyn protein_coding retained_intron MGP_LPJ_T0055629.1 MGP_LPJ_G0025913.1 mouse_genomes_project 2 87410705 87411653 - MGP_LPJ_P0055629 Olfr1079 protein_coding protein_coding MGP_LPJ_T0055630.1 MGP_LPJ_G0025913.1 mouse_genomes_project 2 87410705 87416091 - MGP_LPJ_P0055630 Olfr1079 protein_coding protein_coding MGP_LPJ_T0053499.1 MGP_LPJ_G0025472.1 mouse_genomes_project 2 27847823 27852064 + Gm13547 protein_coding processed_transcript MGP_LPJ_T0053501.1 MGP_LPJ_G0025472.1 mouse_genomes_project 2 27850150 27852714 + MGP_LPJ_P0053501 Gm13547 protein_coding protein_coding MGP_LPJ_T0053502.1 MGP_LPJ_G0025472.1 mouse_genomes_project 2 27850185 27852592 + MGP_LPJ_P0053502 Gm13547 protein_coding protein_coding MGP_LPJ_T0058461.1 MGP_LPJ_G0026678.1 mouse_genomes_project 2 160717426 160717483 - MGP_LPJ_P0058461 Gm17581 protein_coding protein_coding MGP_LPJ_T0058975.1 MGP_LPJ_G0026786.1 mouse_genomes_project 2 169948437 169967385 - MGP_LPJ_P0058975 Sdc4 protein_coding protein_coding MGP_LPJ_T0058976.1 MGP_LPJ_G0026786.1 mouse_genomes_project 2 169950102 169968086 - Sdc4 protein_coding processed_transcript MGP_LPJ_T0007153.1 MGP_LPJ_G0005871.1 mouse_genomes_project 2 8654209 8710337 - 8030442B05Rik lincRNA lincRNA MGP_LPJ_T0054355.1 MGP_LPJ_G0025618.1 mouse_genomes_project 2 35696865 35697819 - MGP_LPJ_P0054355 Olfr362 protein_coding protein_coding MGP_LPJ_T0055765.1 MGP_LPJ_G0026032.1 mouse_genomes_project 2 90619023 90619959 - MGP_LPJ_P0055765 Olfr1232 protein_coding protein_coding MGP_LPJ_T0058839.1 MGP_LPJ_G0026744.1 mouse_genomes_project 2 166215504 166221386 - MGP_LPJ_P0058839 Emilin3 protein_coding protein_coding MGP_LPJ_T0058840.1 MGP_LPJ_G0026744.1 mouse_genomes_project 2 166215505 166221397 - MGP_LPJ_P0058840 Emilin3 protein_coding protein_coding MGP_LPJ_T0056548.1 MGP_LPJ_G0026225.1 mouse_genomes_project 2 115090945 115109282 - MGP_LPJ_P0056548 Emc4 protein_coding unknown_likely_coding MGP_LPJ_T0056549.1 MGP_LPJ_G0026225.1 mouse_genomes_project 2 115091721 115095949 - Emc4 protein_coding processed_transcript MGP_LPJ_T0056197.1 MGP_LPJ_G0026124.1 mouse_genomes_project 2 96037984 96147768 - MGP_LPJ_P0056197 Ttc17 protein_coding protein_coding MGP_LPJ_T0056198.1 MGP_LPJ_G0026124.1 mouse_genomes_project 2 96037986 96147782 - MGP_LPJ_P0056198 Ttc17 protein_coding protein_coding MGP_LPJ_T0056199.1 MGP_LPJ_G0026124.1 mouse_genomes_project 2 96066120 96147791 - MGP_LPJ_P0056199 Ttc17 protein_coding protein_coding MGP_LPJ_T0056200.1 MGP_LPJ_G0026124.1 mouse_genomes_project 2 96092708 96100523 - Ttc17 protein_coding processed_transcript MGP_LPJ_T0056201.1 MGP_LPJ_G0026124.1 mouse_genomes_project 2 96118016 96146104 - Ttc17 protein_coding processed_transcript MGP_LPJ_T0057443.1 MGP_LPJ_G0026420.1 mouse_genomes_project 2 132675683 132708022 + MGP_LPJ_P0057443 Ttl protein_coding protein_coding MGP_LPJ_T0057444.1 MGP_LPJ_G0026420.1 mouse_genomes_project 2 132675726 132677847 + Ttl protein_coding processed_transcript MGP_LPJ_T0057445.1 MGP_LPJ_G0026420.1 mouse_genomes_project 2 132685793 132700544 + MGP_LPJ_P0057445 Ttl protein_coding protein_coding MGP_LPJ_T0055666.1 MGP_LPJ_G0025949.1 mouse_genomes_project 2 88559121 88562461 - MGP_LPJ_P0055666 Pramel7 protein_coding protein_coding MGP_LPJ_T0055667.1 MGP_LPJ_G0025949.1 mouse_genomes_project 2 88560926 88568095 - Pramel7 protein_coding processed_transcript MGP_LPJ_T0055668.1 MGP_LPJ_G0025949.1 mouse_genomes_project 2 88561020 88568469 - Pramel7 protein_coding processed_transcript MGP_LPJ_T0055669.1 MGP_LPJ_G0025949.1 mouse_genomes_project 2 88561162 88568104 - Pramel7 protein_coding processed_transcript MGP_LPJ_T0052687.1 MGP_LPJ_G0025321.1 mouse_genomes_project 2 19850100 20275571 + MGP_LPJ_P0052687 protein_coding protein_coding MGP_LPJ_T0052688.1 MGP_LPJ_G0025321.1 mouse_genomes_project 2 19850102 19931386 + protein_coding processed_transcript MGP_LPJ_T0052689.1 MGP_LPJ_G0025321.1 mouse_genomes_project 2 19850102 19919333 + protein_coding processed_transcript MGP_LPJ_T0052690.1 MGP_LPJ_G0025321.1 mouse_genomes_project 2 19863725 20050524 + MGP_LPJ_P0052690 protein_coding protein_coding MGP_LPJ_T0052691.1 MGP_LPJ_G0025321.1 mouse_genomes_project 2 20224927 20263032 + protein_coding processed_transcript MGP_LPJ_T0013818.1 MGP_LPJ_G0011909.1 mouse_genomes_project 2 171277801 171278162 - processed_pseudogene processed_pseudogene MGP_LPJ_T0056725.1 MGP_LPJ_G0026268.1 mouse_genomes_project 2 122183155 122204285 - MGP_LPJ_P0056725 Rmdn3 protein_coding protein_coding MGP_LPJ_T0056726.1 MGP_LPJ_G0026268.1 mouse_genomes_project 2 122185209 122187030 - Rmdn3 protein_coding retained_intron MGP_LPJ_T0056727.1 MGP_LPJ_G0026268.1 mouse_genomes_project 2 122188572 122194694 - Rmdn3 protein_coding retained_intron MGP_LPJ_T0056728.1 MGP_LPJ_G0026268.1 mouse_genomes_project 2 122193409 122194703 - Rmdn3 protein_coding retained_intron MGP_LPJ_T0056729.1 MGP_LPJ_G0026268.1 mouse_genomes_project 2 122201282 122204075 - MGP_LPJ_P0056729 Rmdn3 protein_coding protein_coding MGP_LPJ_T0056730.1 MGP_LPJ_G0026268.1 mouse_genomes_project 2 122201312 122204199 - MGP_LPJ_P0056730 Rmdn3 protein_coding protein_coding MGP_LPJ_T0056731.1 MGP_LPJ_G0026268.1 mouse_genomes_project 2 122201322 122204215 - MGP_LPJ_P0056731 Rmdn3 protein_coding protein_coding MGP_LPJ_T0007277.1 MGP_LPJ_G0005972.1 mouse_genomes_project 2 95157179 95174237 + Gm10804 lincRNA lincRNA MGP_LPJ_T0007278.1 MGP_LPJ_G0005972.1 mouse_genomes_project 2 95157180 95161088 + Gm10804 lincRNA lincRNA MGP_LPJ_T0007279.1 MGP_LPJ_G0005972.1 mouse_genomes_project 2 95157181 95170764 + Gm10804 lincRNA lincRNA MGP_LPJ_T0007280.1 MGP_LPJ_G0005972.1 mouse_genomes_project 2 95172803 95173040 + Gm10804 lincRNA lincRNA MGP_LPJ_T0013603.1 MGP_LPJ_G0011694.1 mouse_genomes_project 2 86511028 86511960 + processed_pseudogene processed_pseudogene MGP_LPJ_T0052198.1 MGP_LPJ_G0025241.1 mouse_genomes_project 2 491280 502033 + Cdnf protein_coding processed_transcript MGP_LPJ_T0052199.1 MGP_LPJ_G0025241.1 mouse_genomes_project 2 491315 504602 + MGP_LPJ_P0052199 Cdnf protein_coding protein_coding MGP_LPJ_T0052200.1 MGP_LPJ_G0025241.1 mouse_genomes_project 2 492134 502111 + Cdnf protein_coding processed_transcript MGP_LPJ_T0013421.1 MGP_LPJ_G0011512.1 mouse_genomes_project 2 19102561 19103182 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001057.1 MGP_LPJ_G0000982.1 mouse_genomes_project 2 8493786 8496458 - TEC TEC MGP_LPJ_T0058739.1 MGP_LPJ_G0026723.1 mouse_genomes_project 2 163158813 163211667 + MGP_LPJ_P0058739 Rprd1b protein_coding protein_coding MGP_LPJ_T0058740.1 MGP_LPJ_G0026723.1 mouse_genomes_project 2 163158824 163180903 + Rprd1b protein_coding retained_intron MGP_LPJ_T0058741.1 MGP_LPJ_G0026723.1 mouse_genomes_project 2 163159008 163211667 + Rprd1b protein_coding processed_transcript MGP_LPJ_T0058742.1 MGP_LPJ_G0026723.1 mouse_genomes_project 2 163159017 163211667 + MGP_LPJ_P0058742 Rprd1b protein_coding protein_coding MGP_LPJ_T0058743.1 MGP_LPJ_G0026723.1 mouse_genomes_project 2 163159037 163211667 + MGP_LPJ_P0058743 Rprd1b protein_coding protein_coding MGP_LPJ_T0058744.1 MGP_LPJ_G0026723.1 mouse_genomes_project 2 163159115 163273509 + MGP_LPJ_P0058744 Rprd1b protein_coding protein_coding MGP_LPJ_T0058745.1 MGP_LPJ_G0026723.1 mouse_genomes_project 2 163175597 163208532 + MGP_LPJ_P0058745 Rprd1b protein_coding protein_coding MGP_LPJ_T0058746.1 MGP_LPJ_G0026723.1 mouse_genomes_project 2 163180151 163203975 + MGP_LPJ_P0058746 Rprd1b protein_coding protein_coding MGP_LPJ_T0013729.1 MGP_LPJ_G0011820.1 mouse_genomes_project 2 136518846 136519451 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013566.1 MGP_LPJ_G0011657.1 mouse_genomes_project 2 74142336 74143337 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017732.1 MGP_LPJ_G0015343.1 mouse_genomes_project 2 71791701 71794388 + Gm13663 processed_transcript processed_transcript MGP_LPJ_T0017733.1 MGP_LPJ_G0015343.1 mouse_genomes_project 2 71792658 71794348 + Gm13663 processed_transcript processed_transcript MGP_LPJ_T0007155.1 MGP_LPJ_G0005873.1 mouse_genomes_project 2 8695851 8697873 + Gm13291 lincRNA lincRNA MGP_LPJ_T0013454.1 MGP_LPJ_G0011545.1 mouse_genomes_project 2 34064967 34065274 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055751.1 MGP_LPJ_G0026020.1 mouse_genomes_project 2 90369263 90370199 - MGP_LPJ_P0055751 Olfr1218 protein_coding protein_coding MGP_LPJ_T0003983.1 MGP_LPJ_G0003556.1 mouse_genomes_project 2 43979994 43985090 + antisense antisense MGP_LPJ_T0003984.1 MGP_LPJ_G0003556.1 mouse_genomes_project 2 43981114 43985090 + antisense antisense MGP_LPJ_T0013829.1 MGP_LPJ_G0011920.1 mouse_genomes_project 2 174276412 174277257 - processed_pseudogene processed_pseudogene MGP_LPJ_T0059771.1 MGP_LPJ_G0026963.1 mouse_genomes_project 2 188228298 188232293 - MGP_LPJ_P0059771 Samd10 protein_coding protein_coding MGP_LPJ_T0059772.1 MGP_LPJ_G0026963.1 mouse_genomes_project 2 188228301 188232279 - MGP_LPJ_P0059772 Samd10 protein_coding nonsense_mediated_decay MGP_LPJ_T0059773.1 MGP_LPJ_G0026963.1 mouse_genomes_project 2 188229872 188230687 - Samd10 protein_coding retained_intron MGP_LPJ_T0013835.1 MGP_LPJ_G0011926.1 mouse_genomes_project 2 180711283 180711644 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102017.1 MGP_LPJ_G0040054.1 mouse_genomes_project 2 35698427 35698681 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0100587.1 MGP_LPJ_G0038850.1 mouse_genomes_project 2 53852601 53852740 - Gm24549 snoRNA snoRNA MGP_LPJ_T0057841.1 MGP_LPJ_G0026509.1 mouse_genomes_project 2 144741121 144761649 - Flrt3 protein_coding processed_transcript MGP_LPJ_T0057842.1 MGP_LPJ_G0026509.1 mouse_genomes_project 2 144748405 144761668 - MGP_LPJ_P0057842 Flrt3 protein_coding protein_coding MGP_LPJ_T0057843.1 MGP_LPJ_G0026509.1 mouse_genomes_project 2 144749525 144761599 - MGP_LPJ_P0057843 Flrt3 protein_coding protein_coding MGP_LPJ_T0007242.1 MGP_LPJ_G0005941.1 mouse_genomes_project 2 74288739 74290159 - A630050E04Rik lincRNA lincRNA MGP_LPJ_T0001110.1 MGP_LPJ_G0001035.1 mouse_genomes_project 2 67644899 67649804 + TEC TEC MGP_LPJ_T0007429.1 MGP_LPJ_G0006094.1 mouse_genomes_project 2 175343533 175351213 - 4930529I22Rik lincRNA lincRNA MGP_LPJ_T0057142.1 MGP_LPJ_G0026343.1 mouse_genomes_project 2 125381839 125387229 + MGP_LPJ_P0057142 B2m protein_coding protein_coding MGP_LPJ_T0054072.1 MGP_LPJ_G0025554.1 mouse_genomes_project 2 31142635 31144447 + MGP_LPJ_P0054072 Ptrh1 protein_coding protein_coding MGP_LPJ_T0054073.1 MGP_LPJ_G0025554.1 mouse_genomes_project 2 31142665 31143605 + Ptrh1 protein_coding processed_transcript MGP_LPJ_T0054074.1 MGP_LPJ_G0025554.1 mouse_genomes_project 2 31142714 31144299 + Ptrh1 protein_coding retained_intron MGP_LPJ_T0052168.1 MGP_LPJ_G0025236.1 mouse_genomes_project 2 315853 343612 - MGP_LPJ_P0052168 Olah protein_coding protein_coding MGP_LPJ_T0052169.1 MGP_LPJ_G0025236.1 mouse_genomes_project 2 315858 368410 - MGP_LPJ_P0052169 Olah protein_coding protein_coding MGP_LPJ_T0052170.1 MGP_LPJ_G0025236.1 mouse_genomes_project 2 315888 343590 - MGP_LPJ_P0052170 Olah protein_coding protein_coding MGP_LPJ_T0059463.1 MGP_LPJ_G0026902.1 mouse_genomes_project 2 180721035 180730039 + MGP_LPJ_P0059463 Tubb1 protein_coding protein_coding MGP_LPJ_T0053649.1 MGP_LPJ_G0025493.1 mouse_genomes_project 2 28408302 28428720 + MGP_LPJ_P0053649 protein_coding protein_coding MGP_LPJ_T0052901.1 MGP_LPJ_G0025359.1 mouse_genomes_project 2 23045326 23047638 - MGP_LPJ_P0052901 Rnf224 protein_coding protein_coding MGP_LPJ_T0052902.1 MGP_LPJ_G0025359.1 mouse_genomes_project 2 23045833 23047540 - MGP_LPJ_P0052902 Rnf224 protein_coding protein_coding MGP_LPJ_T0056662.1 MGP_LPJ_G0026253.1 mouse_genomes_project 2 121612620 121664301 + MGP_LPJ_P0056662 Bub1b protein_coding protein_coding MGP_LPJ_T0056663.1 MGP_LPJ_G0026253.1 mouse_genomes_project 2 121618921 121628575 + Bub1b protein_coding retained_intron MGP_LPJ_T0056664.1 MGP_LPJ_G0026253.1 mouse_genomes_project 2 121649943 121651173 + Bub1b protein_coding retained_intron MGP_LPJ_T0056665.1 MGP_LPJ_G0026253.1 mouse_genomes_project 2 121650878 121659460 + Bub1b protein_coding retained_intron MGP_LPJ_T0011538.1 MGP_LPJ_G0009656.1 mouse_genomes_project 2 172786406 172786595 + Gm27494 misc_RNA misc_RNA MGP_LPJ_T0007212.1 MGP_LPJ_G0005916.1 mouse_genomes_project 2 50417619 50476476 + Gm13497 lincRNA lincRNA MGP_LPJ_T0058780.1 MGP_LPJ_G0026731.1 mouse_genomes_project 2 163681004 163722870 + MGP_LPJ_P0058780 Arhgap40 protein_coding protein_coding MGP_LPJ_T0058781.1 MGP_LPJ_G0026731.1 mouse_genomes_project 2 163681004 163723004 + MGP_LPJ_P0058781 Arhgap40 protein_coding protein_coding MGP_LPJ_T0058782.1 MGP_LPJ_G0026731.1 mouse_genomes_project 2 163713311 163723004 + Arhgap40 protein_coding retained_intron MGP_LPJ_T0059362.1 MGP_LPJ_G0026872.1 mouse_genomes_project 2 176752799 176912015 + MGP_LPJ_P0059362 Dok5 protein_coding protein_coding MGP_LPJ_T0052249.1 MGP_LPJ_G0025249.1 mouse_genomes_project 2 2059027 2082235 - MGP_LPJ_P0052249 Mcm10 protein_coding protein_coding MGP_LPJ_T0052250.1 MGP_LPJ_G0025249.1 mouse_genomes_project 2 2060037 2065132 - Mcm10 protein_coding retained_intron MGP_LPJ_T0052251.1 MGP_LPJ_G0025249.1 mouse_genomes_project 2 2060037 2070792 - Mcm10 protein_coding retained_intron MGP_LPJ_T0052252.1 MGP_LPJ_G0025249.1 mouse_genomes_project 2 2060037 2082677 - MGP_LPJ_P0052252 Mcm10 protein_coding protein_coding MGP_LPJ_T0052253.1 MGP_LPJ_G0025249.1 mouse_genomes_project 2 2060344 2062495 - Mcm10 protein_coding retained_intron MGP_LPJ_T0052254.1 MGP_LPJ_G0025249.1 mouse_genomes_project 2 2060573 2064076 - Mcm10 protein_coding retained_intron MGP_LPJ_T0052255.1 MGP_LPJ_G0025249.1 mouse_genomes_project 2 2068254 2074333 - Mcm10 protein_coding retained_intron MGP_LPJ_T0052256.1 MGP_LPJ_G0025249.1 mouse_genomes_project 2 2073275 2074553 - Mcm10 protein_coding retained_intron MGP_LPJ_T0052257.1 MGP_LPJ_G0025249.1 mouse_genomes_project 2 2075744 2082639 - Mcm10 protein_coding processed_transcript MGP_LPJ_T0052258.1 MGP_LPJ_G0025249.1 mouse_genomes_project 2 2076231 2082601 - Mcm10 protein_coding retained_intron MGP_LPJ_T0007172.1 MGP_LPJ_G0005885.1 mouse_genomes_project 2 24020836 24024532 - C330006A16Rik lincRNA lincRNA MGP_LPJ_T0007173.1 MGP_LPJ_G0005885.1 mouse_genomes_project 2 24022393 24022813 - C330006A16Rik lincRNA lincRNA MGP_LPJ_T0100608.1 MGP_LPJ_G0038871.1 mouse_genomes_project 2 115247471 115247600 + Gm22676 snoRNA snoRNA MGP_LPJ_T0059147.1 MGP_LPJ_G0026830.1 mouse_genomes_project 2 171111421 171127016 + MGP_LPJ_P0059147 Slc2a10 protein_coding protein_coding MGP_LPJ_T0059148.1 MGP_LPJ_G0026830.1 mouse_genomes_project 2 171116140 171121854 + Slc2a10 protein_coding processed_transcript MGP_LPJ_T0010409.1 MGP_LPJ_G0008527.1 mouse_genomes_project 2 25383530 25383612 - Mir7578 miRNA miRNA MGP_LPJ_T0057800.1 MGP_LPJ_G0026498.1 mouse_genomes_project 2 140849198 141021813 + MGP_LPJ_P0057800 Slx4ip protein_coding protein_coding MGP_LPJ_T0057801.1 MGP_LPJ_G0026498.1 mouse_genomes_project 2 140849481 140958402 + MGP_LPJ_P0057801 Slx4ip protein_coding protein_coding MGP_LPJ_T0057802.1 MGP_LPJ_G0026498.1 mouse_genomes_project 2 140849556 141020495 + MGP_LPJ_P0057802 Slx4ip protein_coding unknown_likely_coding MGP_LPJ_T0057803.1 MGP_LPJ_G0026498.1 mouse_genomes_project 2 140850146 141020438 + Slx4ip protein_coding processed_transcript MGP_LPJ_T0057804.1 MGP_LPJ_G0026498.1 mouse_genomes_project 2 140864584 141021942 + MGP_LPJ_P0057804 Slx4ip protein_coding protein_coding MGP_LPJ_T0057099.1 MGP_LPJ_G0026333.1 mouse_genomes_project 2 124632240 124642435 - MGP_LPJ_P0057099 protein_coding protein_coding MGP_LPJ_T0056464.1 MGP_LPJ_G0026179.1 mouse_genomes_project 2 112197196 112250630 + MGP_LPJ_P0056464 Bdnf protein_coding protein_coding MGP_LPJ_T0056465.1 MGP_LPJ_G0026179.1 mouse_genomes_project 2 112198393 112250630 + MGP_LPJ_P0056465 Bdnf protein_coding protein_coding MGP_LPJ_T0056466.1 MGP_LPJ_G0026179.1 mouse_genomes_project 2 112198393 112250630 + MGP_LPJ_P0056466 Bdnf protein_coding protein_coding MGP_LPJ_T0056467.1 MGP_LPJ_G0026179.1 mouse_genomes_project 2 112198393 112250630 + MGP_LPJ_P0056467 Bdnf protein_coding protein_coding MGP_LPJ_T0056468.1 MGP_LPJ_G0026179.1 mouse_genomes_project 2 112199528 112250630 + MGP_LPJ_P0056468 Bdnf protein_coding protein_coding MGP_LPJ_T0056469.1 MGP_LPJ_G0026179.1 mouse_genomes_project 2 112214939 112250630 + MGP_LPJ_P0056469 Bdnf protein_coding protein_coding MGP_LPJ_T0056470.1 MGP_LPJ_G0026179.1 mouse_genomes_project 2 112215529 112250630 + MGP_LPJ_P0056470 Bdnf protein_coding protein_coding MGP_LPJ_T0056471.1 MGP_LPJ_G0026179.1 mouse_genomes_project 2 112216045 112250630 + MGP_LPJ_P0056471 Bdnf protein_coding protein_coding MGP_LPJ_T0056472.1 MGP_LPJ_G0026179.1 mouse_genomes_project 2 112216891 112250630 + MGP_LPJ_P0056472 Bdnf protein_coding protein_coding MGP_LPJ_T0056473.1 MGP_LPJ_G0026179.1 mouse_genomes_project 2 112216951 112250630 + MGP_LPJ_P0056473 Bdnf protein_coding protein_coding MGP_LPJ_T0056474.1 MGP_LPJ_G0026179.1 mouse_genomes_project 2 112233038 112250630 + MGP_LPJ_P0056474 Bdnf protein_coding protein_coding MGP_LPJ_T0055287.1 MGP_LPJ_G0025799.1 mouse_genomes_project 2 76927208 76930158 + MGP_LPJ_P0055287 Dfnb59 protein_coding protein_coding MGP_LPJ_T0055288.1 MGP_LPJ_G0025799.1 mouse_genomes_project 2 76927231 76934547 + MGP_LPJ_P0055288 Dfnb59 protein_coding protein_coding MGP_LPJ_T0055289.1 MGP_LPJ_G0025799.1 mouse_genomes_project 2 76929005 76937302 + MGP_LPJ_P0055289 Dfnb59 protein_coding protein_coding MGP_LPJ_T0057446.1 MGP_LPJ_G0026421.1 mouse_genomes_project 2 132713990 132743543 + MGP_LPJ_P0057446 Polr1b protein_coding protein_coding MGP_LPJ_T0057447.1 MGP_LPJ_G0026421.1 mouse_genomes_project 2 132714022 132737086 + MGP_LPJ_P0057447 Polr1b protein_coding protein_coding MGP_LPJ_T0057448.1 MGP_LPJ_G0026421.1 mouse_genomes_project 2 132731115 132733935 + Polr1b protein_coding processed_transcript MGP_LPJ_T0057449.1 MGP_LPJ_G0026421.1 mouse_genomes_project 2 132734099 132739448 + Polr1b protein_coding processed_transcript MGP_LPJ_T0057450.1 MGP_LPJ_G0026421.1 mouse_genomes_project 2 132738028 132740148 + Polr1b protein_coding processed_transcript MGP_LPJ_T0054049.1 MGP_LPJ_G0025550.1 mouse_genomes_project 2 31082939 31120919 + MGP_LPJ_P0054049 Sh2d3c protein_coding protein_coding MGP_LPJ_T0054050.1 MGP_LPJ_G0025550.1 mouse_genomes_project 2 31091777 31110777 + Sh2d3c protein_coding processed_transcript MGP_LPJ_T0054051.1 MGP_LPJ_G0025550.1 mouse_genomes_project 2 31091777 31121491 + MGP_LPJ_P0054051 Sh2d3c protein_coding protein_coding MGP_LPJ_T0054054.1 MGP_LPJ_G0025550.1 mouse_genomes_project 2 31099659 31107254 + Sh2d3c protein_coding processed_transcript MGP_LPJ_T0054055.1 MGP_LPJ_G0025550.1 mouse_genomes_project 2 31107422 31112997 + Sh2d3c protein_coding processed_transcript MGP_LPJ_T0054056.1 MGP_LPJ_G0025550.1 mouse_genomes_project 2 31107424 31109609 + Sh2d3c protein_coding processed_transcript MGP_LPJ_T0054057.1 MGP_LPJ_G0025550.1 mouse_genomes_project 2 31107519 31120927 + MGP_LPJ_P0054057 Sh2d3c protein_coding unknown_likely_coding MGP_LPJ_T0057763.1 MGP_LPJ_G0026492.1 mouse_genomes_project 2 139571476 139657278 + Plcb4 protein_coding processed_transcript MGP_LPJ_T0057764.1 MGP_LPJ_G0026492.1 mouse_genomes_project 2 139572019 139657365 + Plcb4 protein_coding processed_transcript MGP_LPJ_T0057765.1 MGP_LPJ_G0026492.1 mouse_genomes_project 2 139574126 139798144 + Plcb4 protein_coding retained_intron MGP_LPJ_T0057766.1 MGP_LPJ_G0026492.1 mouse_genomes_project 2 139574222 139908784 + MGP_LPJ_P0057766 Plcb4 protein_coding protein_coding MGP_LPJ_T0057767.1 MGP_LPJ_G0026492.1 mouse_genomes_project 2 139656356 139831230 + Plcb4 protein_coding retained_intron MGP_LPJ_T0057768.1 MGP_LPJ_G0026492.1 mouse_genomes_project 2 139656356 139944369 + MGP_LPJ_P0057768 Plcb4 protein_coding nonsense_mediated_decay MGP_LPJ_T0057769.1 MGP_LPJ_G0026492.1 mouse_genomes_project 2 139682326 139829154 + Plcb4 protein_coding processed_transcript MGP_LPJ_T0057770.1 MGP_LPJ_G0026492.1 mouse_genomes_project 2 139724681 139944168 + MGP_LPJ_P0057770 Plcb4 protein_coding protein_coding MGP_LPJ_T0057771.1 MGP_LPJ_G0026492.1 mouse_genomes_project 2 139791640 139945686 + MGP_LPJ_P0057771 Plcb4 protein_coding protein_coding MGP_LPJ_T0057772.1 MGP_LPJ_G0026492.1 mouse_genomes_project 2 139808015 139863753 + Plcb4 protein_coding processed_transcript MGP_LPJ_T0057773.1 MGP_LPJ_G0026492.1 mouse_genomes_project 2 139866519 139874800 + Plcb4 protein_coding processed_transcript MGP_LPJ_T0057774.1 MGP_LPJ_G0026492.1 mouse_genomes_project 2 139870917 139874753 + Plcb4 protein_coding processed_transcript MGP_LPJ_T0057775.1 MGP_LPJ_G0026492.1 mouse_genomes_project 2 139908799 139913963 + Plcb4 protein_coding processed_transcript MGP_LPJ_T0057776.1 MGP_LPJ_G0026492.1 mouse_genomes_project 2 139913642 139945677 + MGP_LPJ_P0057776 Plcb4 protein_coding protein_coding MGP_LPJ_T0057777.1 MGP_LPJ_G0026492.1 mouse_genomes_project 2 139938329 139939143 + Plcb4 protein_coding processed_transcript MGP_LPJ_T0010480.1 MGP_LPJ_G0008598.1 mouse_genomes_project 2 134243022 134243081 - Gm23876 miRNA miRNA MGP_LPJ_T0055290.1 MGP_LPJ_G0025800.1 mouse_genomes_project 2 76941792 76951806 - MGP_LPJ_P0055290 Fkbp7 protein_coding protein_coding MGP_LPJ_T0055291.1 MGP_LPJ_G0025800.1 mouse_genomes_project 2 76941811 76943992 - Fkbp7 protein_coding processed_transcript MGP_LPJ_T0055292.1 MGP_LPJ_G0025800.1 mouse_genomes_project 2 76944455 76951852 - MGP_LPJ_P0055292 Fkbp7 protein_coding nonsense_mediated_decay MGP_LPJ_T0055293.1 MGP_LPJ_G0025800.1 mouse_genomes_project 2 76950097 76951821 - Fkbp7 protein_coding retained_intron MGP_LPJ_T0056528.1 MGP_LPJ_G0026215.1 mouse_genomes_project 2 114686384 114687338 - MGP_LPJ_P0056528 Olfr1312 protein_coding protein_coding MGP_LPJ_T0007446.1 MGP_LPJ_G0006109.1 mouse_genomes_project 2 185861086 185863095 + 4930591A17Rik lincRNA lincRNA MGP_LPJ_T0057599.1 MGP_LPJ_G0026457.1 mouse_genomes_project 2 134793567 134797013 - Adam33 protein_coding retained_intron MGP_LPJ_T0057600.1 MGP_LPJ_G0026457.1 mouse_genomes_project 2 134793793 134808009 - MGP_LPJ_P0057600 Adam33 protein_coding protein_coding MGP_LPJ_T0057601.1 MGP_LPJ_G0026457.1 mouse_genomes_project 2 134793801 134807764 - Adam33 protein_coding retained_intron MGP_LPJ_T0057602.1 MGP_LPJ_G0026457.1 mouse_genomes_project 2 134793839 134799340 - MGP_LPJ_P0057602 Adam33 protein_coding protein_coding MGP_LPJ_T0057603.1 MGP_LPJ_G0026457.1 mouse_genomes_project 2 134793851 134807740 - MGP_LPJ_P0057603 Adam33 protein_coding nonsense_mediated_decay MGP_LPJ_T0057604.1 MGP_LPJ_G0026457.1 mouse_genomes_project 2 134794085 134808009 - MGP_LPJ_P0057604 Adam33 protein_coding protein_coding MGP_LPJ_T0057605.1 MGP_LPJ_G0026457.1 mouse_genomes_project 2 134794086 134799454 - Adam33 protein_coding retained_intron MGP_LPJ_T0057606.1 MGP_LPJ_G0026457.1 mouse_genomes_project 2 134796018 134797503 - MGP_LPJ_P0057606 Adam33 protein_coding nonsense_mediated_decay MGP_LPJ_T0057607.1 MGP_LPJ_G0026457.1 mouse_genomes_project 2 134796066 134797493 - Adam33 protein_coding processed_transcript MGP_LPJ_T0057608.1 MGP_LPJ_G0026457.1 mouse_genomes_project 2 134796197 134797036 - Adam33 protein_coding processed_transcript MGP_LPJ_T0057609.1 MGP_LPJ_G0026457.1 mouse_genomes_project 2 134796498 134797506 - Adam33 protein_coding retained_intron MGP_LPJ_T0057610.1 MGP_LPJ_G0026457.1 mouse_genomes_project 2 134800609 134807708 - MGP_LPJ_P0057610 Adam33 protein_coding protein_coding MGP_LPJ_T0057611.1 MGP_LPJ_G0026457.1 mouse_genomes_project 2 134805128 134807738 - Adam33 protein_coding retained_intron MGP_LPJ_T0007192.1 MGP_LPJ_G0005900.1 mouse_genomes_project 2 32572740 32586788 - Gm38389 lincRNA lincRNA MGP_LPJ_T0055984.1 MGP_LPJ_G0026089.1 mouse_genomes_project 2 93002603 93024370 + Lrp4 protein_coding processed_transcript MGP_LPJ_T0055985.1 MGP_LPJ_G0026089.1 mouse_genomes_project 2 93002603 93059578 + MGP_LPJ_P0055985 Lrp4 protein_coding protein_coding MGP_LPJ_T0055986.1 MGP_LPJ_G0026089.1 mouse_genomes_project 2 93021338 93025949 + Lrp4 protein_coding processed_transcript MGP_LPJ_T0055987.1 MGP_LPJ_G0026089.1 mouse_genomes_project 2 93021401 93023925 + Lrp4 protein_coding processed_transcript MGP_LPJ_T0007284.1 MGP_LPJ_G0005975.1 mouse_genomes_project 2 97152984 97156121 + Gm13794 lincRNA lincRNA MGP_LPJ_T0017765.1 MGP_LPJ_G0015365.1 mouse_genomes_project 2 106780732 106789777 + Platr14 processed_transcript processed_transcript MGP_LPJ_T0017766.1 MGP_LPJ_G0015365.1 mouse_genomes_project 2 106780748 106789774 + Platr14 processed_transcript processed_transcript MGP_LPJ_T0017767.1 MGP_LPJ_G0015365.1 mouse_genomes_project 2 106780753 106793150 + Platr14 processed_transcript processed_transcript MGP_LPJ_T0017768.1 MGP_LPJ_G0015365.1 mouse_genomes_project 2 106780761 106789850 + Platr14 processed_transcript processed_transcript MGP_LPJ_T0017769.1 MGP_LPJ_G0015365.1 mouse_genomes_project 2 106781028 106789771 + Platr14 processed_transcript processed_transcript MGP_LPJ_T0017770.1 MGP_LPJ_G0015365.1 mouse_genomes_project 2 106788917 106790553 + Platr14 processed_transcript processed_transcript MGP_LPJ_T0058221.1 MGP_LPJ_G0026620.1 mouse_genomes_project 2 157765203 157771741 - MGP_LPJ_P0058221 Pdrg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0058222.1 MGP_LPJ_G0026620.1 mouse_genomes_project 2 157765203 157771741 - MGP_LPJ_P0058222 Pdrg1 protein_coding protein_coding MGP_LPJ_T0058223.1 MGP_LPJ_G0026620.1 mouse_genomes_project 2 157765783 157768804 - Pdrg1 protein_coding retained_intron MGP_LPJ_T0058224.1 MGP_LPJ_G0026620.1 mouse_genomes_project 2 157766606 157771680 - MGP_LPJ_P0058224 Pdrg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0058225.1 MGP_LPJ_G0026620.1 mouse_genomes_project 2 157768526 157771660 - Pdrg1 protein_coding retained_intron MGP_LPJ_T0058226.1 MGP_LPJ_G0026620.1 mouse_genomes_project 2 157768696 157771676 - MGP_LPJ_P0058226 Pdrg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0058227.1 MGP_LPJ_G0026620.1 mouse_genomes_project 2 157769664 157771691 - Pdrg1 protein_coding retained_intron MGP_LPJ_T0058228.1 MGP_LPJ_G0026620.1 mouse_genomes_project 2 157770328 157771656 - Pdrg1 protein_coding processed_transcript MGP_LPJ_T0054444.1 MGP_LPJ_G0025640.1 mouse_genomes_project 2 37680583 37690484 + Arpc5l protein_coding processed_transcript MGP_LPJ_T0054445.1 MGP_LPJ_G0025640.1 mouse_genomes_project 2 37683303 37691035 + MGP_LPJ_P0054445 Arpc5l protein_coding protein_coding MGP_LPJ_T0054446.1 MGP_LPJ_G0025640.1 mouse_genomes_project 2 37683368 37689057 + Arpc5l protein_coding processed_transcript MGP_LPJ_T0054447.1 MGP_LPJ_G0025640.1 mouse_genomes_project 2 37683384 37690551 + MGP_LPJ_P0054447 Arpc5l protein_coding nonsense_mediated_decay MGP_LPJ_T0054448.1 MGP_LPJ_G0025640.1 mouse_genomes_project 2 37685245 37691035 + Arpc5l protein_coding processed_transcript MGP_LPJ_T0013465.1 MGP_LPJ_G0011556.1 mouse_genomes_project 2 37428138 37428744 + processed_pseudogene processed_pseudogene MGP_LPJ_T0055117.1 MGP_LPJ_G0025757.1 mouse_genomes_project 2 71522496 71525843 - MGP_LPJ_P0055117 Dlx2 protein_coding protein_coding MGP_LPJ_T0055118.1 MGP_LPJ_G0025757.1 mouse_genomes_project 2 71523954 71525039 - Dlx2 protein_coding retained_intron MGP_LPJ_T0013638.1 MGP_LPJ_G0011729.1 mouse_genomes_project 2 97452056 97452195 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007451.1 MGP_LPJ_G0006114.1 mouse_genomes_project 2 187414794 187416150 + Gm14339 lincRNA lincRNA MGP_LPJ_T0003896.1 MGP_LPJ_G0003489.1 mouse_genomes_project 2 1143177 1157121 - 1700080N15Rik antisense antisense MGP_LPJ_T0003897.1 MGP_LPJ_G0003489.1 mouse_genomes_project 2 1143179 1157121 - 1700080N15Rik antisense antisense MGP_LPJ_T0003898.1 MGP_LPJ_G0003489.1 mouse_genomes_project 2 1148573 1157119 - 1700080N15Rik antisense antisense MGP_LPJ_T0007336.1 MGP_LPJ_G0006017.1 mouse_genomes_project 2 131748735 131764828 + Gm14009 lincRNA lincRNA MGP_LPJ_T0017679.1 MGP_LPJ_G0015311.1 mouse_genomes_project 2 11507083 11510686 - Stamos processed_transcript antisense MGP_LPJ_T0017680.1 MGP_LPJ_G0015311.1 mouse_genomes_project 2 11509239 11510600 - Stamos processed_transcript retained_intron MGP_LPJ_T0053512.1 MGP_LPJ_G0025474.1 mouse_genomes_project 2 27876026 27888932 + MGP_LPJ_P0053512 Coq4 protein_coding nonsense_mediated_decay MGP_LPJ_T0053513.1 MGP_LPJ_G0025474.1 mouse_genomes_project 2 27876753 27886493 + MGP_LPJ_P0053513 Coq4 protein_coding nonsense_mediated_decay MGP_LPJ_T0053514.1 MGP_LPJ_G0025474.1 mouse_genomes_project 2 27876792 27887634 + MGP_LPJ_P0053514 Coq4 protein_coding protein_coding MGP_LPJ_T0053515.1 MGP_LPJ_G0025474.1 mouse_genomes_project 2 27876804 27885893 + MGP_LPJ_P0053515 Coq4 protein_coding protein_coding MGP_LPJ_T0053516.1 MGP_LPJ_G0025474.1 mouse_genomes_project 2 27878510 27879182 + Coq4 protein_coding retained_intron MGP_LPJ_T0053517.1 MGP_LPJ_G0025474.1 mouse_genomes_project 2 27885455 27886877 + Coq4 protein_coding retained_intron MGP_LPJ_T0007442.1 MGP_LPJ_G0006105.1 mouse_genomes_project 2 178383436 178385824 + Gm14275 lincRNA lincRNA MGP_LPJ_T0057730.1 MGP_LPJ_G0026482.1 mouse_genomes_project 2 136636758 136650392 + MGP_LPJ_P0057730 Chgb protein_coding protein_coding MGP_LPJ_T0057438.1 MGP_LPJ_G0026416.1 mouse_genomes_project 2 132520418 132540067 - MGP_LPJ_P0057438 Zc3h8 protein_coding protein_coding MGP_LPJ_T0055119.1 MGP_LPJ_G0025758.1 mouse_genomes_project 2 71789829 71865522 + Itga6 protein_coding processed_transcript MGP_LPJ_T0055120.1 MGP_LPJ_G0025758.1 mouse_genomes_project 2 71832410 71866211 + Itga6 protein_coding processed_transcript MGP_LPJ_T0055121.1 MGP_LPJ_G0025758.1 mouse_genomes_project 2 71832421 71901959 + MGP_LPJ_P0055121 Itga6 protein_coding protein_coding MGP_LPJ_T0055122.1 MGP_LPJ_G0025758.1 mouse_genomes_project 2 71832620 71903411 + MGP_LPJ_P0055122 Itga6 protein_coding protein_coding MGP_LPJ_T0055123.1 MGP_LPJ_G0025758.1 mouse_genomes_project 2 71883538 71884373 + Itga6 protein_coding processed_transcript MGP_LPJ_T0055124.1 MGP_LPJ_G0025758.1 mouse_genomes_project 2 71894568 71903594 + Itga6 protein_coding processed_transcript MGP_LPJ_T0056348.1 MGP_LPJ_G0026154.1 mouse_genomes_project 2 106285935 106287919 + MGP_LPJ_P0056348 A930018P22Rik protein_coding protein_coding MGP_LPJ_T0056218.1 MGP_LPJ_G0026128.1 mouse_genomes_project 2 103655078 103662865 + MGP_LPJ_P0056218 Rag2 protein_coding protein_coding MGP_LPJ_T0056219.1 MGP_LPJ_G0026128.1 mouse_genomes_project 2 103655106 103661389 + MGP_LPJ_P0056219 Rag2 protein_coding protein_coding MGP_LPJ_T0013529.1 MGP_LPJ_G0011620.1 mouse_genomes_project 2 59560789 59561784 + processed_pseudogene processed_pseudogene MGP_LPJ_T0057807.1 MGP_LPJ_G0026500.1 mouse_genomes_project 2 142247158 142531289 + Btbd3 protein_coding processed_transcript MGP_LPJ_T0057808.1 MGP_LPJ_G0026500.1 mouse_genomes_project 2 142247166 142583233 + Btbd3 protein_coding processed_transcript MGP_LPJ_T0057809.1 MGP_LPJ_G0026500.1 mouse_genomes_project 2 142269392 142274975 + MGP_LPJ_P0057809 Btbd3 protein_coding protein_coding MGP_LPJ_T0004060.1 MGP_LPJ_G0003608.1 mouse_genomes_project 2 106428616 106449768 + Gm13883 antisense antisense MGP_LPJ_T0004061.1 MGP_LPJ_G0003608.1 mouse_genomes_project 2 106428616 106432487 + Gm13883 antisense antisense MGP_LPJ_T0055144.1 MGP_LPJ_G0025761.1 mouse_genomes_project 2 72348638 72511714 + MGP_LPJ_P0055144 Zak protein_coding protein_coding MGP_LPJ_T0055145.1 MGP_LPJ_G0025761.1 mouse_genomes_project 2 72348729 72476163 + MGP_LPJ_P0055145 Zak protein_coding protein_coding MGP_LPJ_T0055146.1 MGP_LPJ_G0025761.1 mouse_genomes_project 2 72348765 72467903 + Zak protein_coding retained_intron MGP_LPJ_T0055147.1 MGP_LPJ_G0025761.1 mouse_genomes_project 2 72348778 72458538 + Zak protein_coding retained_intron MGP_LPJ_T0055148.1 MGP_LPJ_G0025761.1 mouse_genomes_project 2 72348795 72433104 + Zak protein_coding retained_intron MGP_LPJ_T0055149.1 MGP_LPJ_G0025761.1 mouse_genomes_project 2 72362430 72423883 + MGP_LPJ_P0055149 Zak protein_coding protein_coding MGP_LPJ_T0056475.1 MGP_LPJ_G0026180.1 mouse_genomes_project 2 112430205 112440354 + MGP_LPJ_P0056475 Lin7c protein_coding protein_coding MGP_LPJ_T0056476.1 MGP_LPJ_G0026180.1 mouse_genomes_project 2 112430222 112436087 + Lin7c protein_coding retained_intron MGP_LPJ_T0054720.1 MGP_LPJ_G0025687.1 mouse_genomes_project 2 59012731 59254281 + MGP_LPJ_P0054720 Tanc1 protein_coding protein_coding MGP_LPJ_T0054721.1 MGP_LPJ_G0025687.1 mouse_genomes_project 2 59047358 59253849 + MGP_LPJ_P0054721 Tanc1 protein_coding protein_coding MGP_LPJ_T0054722.1 MGP_LPJ_G0025687.1 mouse_genomes_project 2 59087231 59253857 + MGP_LPJ_P0054722 Tanc1 protein_coding protein_coding MGP_LPJ_T0054723.1 MGP_LPJ_G0025687.1 mouse_genomes_project 2 59110782 59128490 + Tanc1 protein_coding processed_transcript MGP_LPJ_T0054724.1 MGP_LPJ_G0025687.1 mouse_genomes_project 2 59147431 59228507 + Tanc1 protein_coding retained_intron MGP_LPJ_T0054725.1 MGP_LPJ_G0025687.1 mouse_genomes_project 2 59175064 59178154 + Tanc1 protein_coding processed_transcript MGP_LPJ_T0054726.1 MGP_LPJ_G0025687.1 mouse_genomes_project 2 59186773 59192567 + Tanc1 protein_coding processed_transcript MGP_LPJ_T0054727.1 MGP_LPJ_G0025687.1 mouse_genomes_project 2 59213168 59216607 + Tanc1 protein_coding retained_intron MGP_LPJ_T0054728.1 MGP_LPJ_G0025687.1 mouse_genomes_project 2 59249871 59253847 + Tanc1 protein_coding retained_intron MGP_LPJ_T0007445.1 MGP_LPJ_G0006108.1 mouse_genomes_project 2 181151640 181161851 + Gm14616 lincRNA lincRNA MGP_LPJ_T0053853.1 MGP_LPJ_G0025523.1 mouse_genomes_project 2 30150887 30216984 + MGP_LPJ_P0053853 Lamc3 protein_coding protein_coding MGP_LPJ_T0053854.1 MGP_LPJ_G0025523.1 mouse_genomes_project 2 30150940 30218277 + MGP_LPJ_P0053854 Lamc3 protein_coding protein_coding MGP_LPJ_T0053855.1 MGP_LPJ_G0025523.1 mouse_genomes_project 2 30192108 30192747 + Lamc3 protein_coding processed_transcript MGP_LPJ_T0055602.1 MGP_LPJ_G0025886.1 mouse_genomes_project 2 86768483 86769440 + MGP_LPJ_P0055602 Olfr1030 protein_coding protein_coding MGP_LPJ_T0055155.1 MGP_LPJ_G0025763.1 mouse_genomes_project 2 73049473 73097102 - MGP_LPJ_P0055155 protein_coding protein_coding MGP_LPJ_T0055156.1 MGP_LPJ_G0025763.1 mouse_genomes_project 2 73049694 73097082 - MGP_LPJ_P0055156 protein_coding protein_coding MGP_LPJ_T0055157.1 MGP_LPJ_G0025763.1 mouse_genomes_project 2 73049698 73095799 - protein_coding processed_transcript MGP_LPJ_T0055158.1 MGP_LPJ_G0025763.1 mouse_genomes_project 2 73051294 73054099 - protein_coding processed_transcript MGP_LPJ_T0055159.1 MGP_LPJ_G0025763.1 mouse_genomes_project 2 73059429 73086979 - protein_coding processed_transcript MGP_LPJ_T0057064.1 MGP_LPJ_G0026325.1 mouse_genomes_project 2 124510381 124527497 - MGP_LPJ_P0057064 Strc protein_coding protein_coding MGP_LPJ_T0057065.1 MGP_LPJ_G0026325.1 mouse_genomes_project 2 124515076 124521694 - MGP_LPJ_P0057065 Strc protein_coding nonsense_mediated_decay MGP_LPJ_T0057066.1 MGP_LPJ_G0026325.1 mouse_genomes_project 2 124519553 124521678 - Strc protein_coding processed_transcript MGP_LPJ_T0057067.1 MGP_LPJ_G0026325.1 mouse_genomes_project 2 124519632 124521457 - Strc protein_coding retained_intron MGP_LPJ_T0057068.1 MGP_LPJ_G0026325.1 mouse_genomes_project 2 124523010 124533455 - Strc protein_coding retained_intron MGP_LPJ_T0007287.1 MGP_LPJ_G0005978.1 mouse_genomes_project 2 101265565 101266050 - Gm29235 lincRNA lincRNA MGP_LPJ_T0013416.1 MGP_LPJ_G0011507.1 mouse_genomes_project 2 17069103 17069331 - processed_pseudogene processed_pseudogene MGP_LPJ_T0058688.1 MGP_LPJ_G0026712.1 mouse_genomes_project 2 162157933 162167544 + MGP_LPJ_P0058688 Tldc2 protein_coding unknown_likely_coding MGP_LPJ_T0058689.1 MGP_LPJ_G0026712.1 mouse_genomes_project 2 162159521 162167545 + MGP_LPJ_P0058689 Tldc2 protein_coding protein_coding MGP_LPJ_T0004121.1 MGP_LPJ_G0003648.1 mouse_genomes_project 2 140070884 140075120 + Gm14218 antisense antisense MGP_LPJ_T0100595.1 MGP_LPJ_G0038858.1 mouse_genomes_project 2 81325840 81325971 + Gm22652 snoRNA snoRNA MGP_LPJ_T0055664.1 MGP_LPJ_G0025947.1 mouse_genomes_project 2 88504791 88505748 + MGP_LPJ_P0055664 Olfr1124 protein_coding protein_coding MGP_LPJ_T0055712.1 MGP_LPJ_G0025984.1 mouse_genomes_project 2 89305086 89306163 - MGP_LPJ_P0055712 Olfr1167 protein_coding protein_coding MGP_LPJ_T0007382.1 MGP_LPJ_G0006054.1 mouse_genomes_project 2 161471595 161476665 - Gm14224 lincRNA lincRNA MGP_LPJ_T0059003.1 MGP_LPJ_G0026795.1 mouse_genomes_project 2 170146079 170165316 - MGP_LPJ_P0059003 Wfdc8 protein_coding protein_coding MGP_LPJ_T0059004.1 MGP_LPJ_G0026795.1 mouse_genomes_project 2 170146087 170165076 - MGP_LPJ_P0059004 Wfdc8 protein_coding protein_coding MGP_LPJ_T0059005.1 MGP_LPJ_G0026795.1 mouse_genomes_project 2 170146834 170165316 - MGP_LPJ_P0059005 Wfdc8 protein_coding protein_coding MGP_LPJ_T0013696.1 MGP_LPJ_G0011787.1 mouse_genomes_project 2 122236066 122237146 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013661.1 MGP_LPJ_G0011752.1 mouse_genomes_project 2 106021060 106021321 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011503.1 MGP_LPJ_G0009621.1 mouse_genomes_project 2 18176800 18176889 + Gm27446 misc_RNA misc_RNA MGP_LPJ_T0059594.1 MGP_LPJ_G0026936.1 mouse_genomes_project 2 187477060 187495181 - MGP_LPJ_P0059594 Ythdf1 protein_coding protein_coding MGP_LPJ_T0059595.1 MGP_LPJ_G0026936.1 mouse_genomes_project 2 187478056 187495181 - MGP_LPJ_P0059595 Ythdf1 protein_coding protein_coding MGP_LPJ_T0059596.1 MGP_LPJ_G0026936.1 mouse_genomes_project 2 187485952 187494619 - MGP_LPJ_P0059596 Ythdf1 protein_coding protein_coding MGP_LPJ_T0013634.1 MGP_LPJ_G0011725.1 mouse_genomes_project 2 95510743 95511254 + processed_pseudogene processed_pseudogene MGP_LPJ_T0055729.1 MGP_LPJ_G0026000.1 mouse_genomes_project 2 89972487 89973414 - MGP_LPJ_P0055729 Olfr1195 protein_coding protein_coding MGP_LPJ_T0056641.1 MGP_LPJ_G0026249.1 mouse_genomes_project 2 121275860 121376632 - MGP_LPJ_P0056641 Gpr176 protein_coding protein_coding MGP_LPJ_T0004209.1 MGP_LPJ_G0003716.1 mouse_genomes_project 2 187535640 187549831 + Gm14341 antisense antisense MGP_LPJ_T0058305.1 MGP_LPJ_G0026641.1 mouse_genomes_project 2 158802820 158828362 + MGP_LPJ_P0058305 Bpifa6 protein_coding protein_coding MGP_LPJ_T0055881.1 MGP_LPJ_G0026078.1 mouse_genomes_project 2 92561841 92567275 + MGP_LPJ_P0055881 Psmc3 protein_coding protein_coding MGP_LPJ_T0055882.1 MGP_LPJ_G0026078.1 mouse_genomes_project 2 92561887 92574202 + MGP_LPJ_P0055882 Psmc3 protein_coding protein_coding MGP_LPJ_T0055883.1 MGP_LPJ_G0026078.1 mouse_genomes_project 2 92561927 92563768 + Psmc3 protein_coding processed_transcript MGP_LPJ_T0055884.1 MGP_LPJ_G0026078.1 mouse_genomes_project 2 92561932 92567275 + MGP_LPJ_P0055884 Psmc3 protein_coding protein_coding MGP_LPJ_T0055885.1 MGP_LPJ_G0026078.1 mouse_genomes_project 2 92562110 92565678 + MGP_LPJ_P0055885 Psmc3 protein_coding protein_coding MGP_LPJ_T0055886.1 MGP_LPJ_G0026078.1 mouse_genomes_project 2 92562133 92564829 + MGP_LPJ_P0055886 Psmc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0055887.1 MGP_LPJ_G0026078.1 mouse_genomes_project 2 92562214 92563551 + Psmc3 protein_coding processed_transcript MGP_LPJ_T0055888.1 MGP_LPJ_G0026078.1 mouse_genomes_project 2 92562310 92563386 + Psmc3 protein_coding processed_transcript MGP_LPJ_T0055889.1 MGP_LPJ_G0026078.1 mouse_genomes_project 2 92562405 92563761 + Psmc3 protein_coding processed_transcript MGP_LPJ_T0055890.1 MGP_LPJ_G0026078.1 mouse_genomes_project 2 92565941 92567277 + Psmc3 protein_coding processed_transcript MGP_LPJ_T0057998.1 MGP_LPJ_G0026548.1 mouse_genomes_project 2 153177180 153219170 - MGP_LPJ_P0057998 Napb protein_coding nonsense_mediated_decay MGP_LPJ_T0057999.1 MGP_LPJ_G0026548.1 mouse_genomes_project 2 153177180 153219224 - MGP_LPJ_P0057999 Napb protein_coding protein_coding MGP_LPJ_T0058000.1 MGP_LPJ_G0026548.1 mouse_genomes_project 2 153189613 153219148 - Napb protein_coding retained_intron MGP_LPJ_T0010498.1 MGP_LPJ_G0008616.1 mouse_genomes_project 2 169869983 169870054 - Mir7678 miRNA miRNA MGP_LPJ_T0007356.1 MGP_LPJ_G0006034.1 mouse_genomes_project 2 142583332 142653602 + Gm14061 lincRNA lincRNA MGP_LPJ_T0010499.1 MGP_LPJ_G0008617.1 mouse_genomes_project 2 173419556 173419652 - Gm22355 miRNA miRNA MGP_LPJ_T0013684.1 MGP_LPJ_G0011775.1 mouse_genomes_project 2 114346762 114347696 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099338.1 MGP_LPJ_G0037601.1 mouse_genomes_project 2 81008702 81008805 + Gm24461 snRNA snRNA MGP_LPJ_T0052873.1 MGP_LPJ_G0025353.1 mouse_genomes_project 2 23003149 23007070 - MGP_LPJ_P0052873 Tor4a protein_coding protein_coding MGP_LPJ_T0052874.1 MGP_LPJ_G0025353.1 mouse_genomes_project 2 23005240 23006943 - MGP_LPJ_P0052874 Tor4a protein_coding protein_coding MGP_LPJ_T0052875.1 MGP_LPJ_G0025353.1 mouse_genomes_project 2 23005975 23006955 - MGP_LPJ_P0052875 Tor4a protein_coding protein_coding MGP_LPJ_T0058359.1 MGP_LPJ_G0026658.1 mouse_genomes_project 2 159489769 159490270 - MGP_LPJ_P0058359 4930519P11Rik protein_coding protein_coding MGP_LPJ_T0052269.1 MGP_LPJ_G0025253.1 mouse_genomes_project 2 2873312 2924611 - MGP_LPJ_P0052269 Cdc123 protein_coding protein_coding MGP_LPJ_T0052270.1 MGP_LPJ_G0025253.1 mouse_genomes_project 2 2873683 2877617 - Cdc123 protein_coding processed_transcript MGP_LPJ_T0052271.1 MGP_LPJ_G0025253.1 mouse_genomes_project 2 2877379 2883386 - Cdc123 protein_coding retained_intron MGP_LPJ_T0052272.1 MGP_LPJ_G0025253.1 mouse_genomes_project 2 2883843 2889753 - Cdc123 protein_coding processed_transcript MGP_LPJ_T0052273.1 MGP_LPJ_G0025253.1 mouse_genomes_project 2 2883962 2912948 - Cdc123 protein_coding retained_intron MGP_LPJ_T0052274.1 MGP_LPJ_G0025253.1 mouse_genomes_project 2 2888485 2913443 - MGP_LPJ_P0052274 Cdc123 protein_coding protein_coding MGP_LPJ_T0052275.1 MGP_LPJ_G0025253.1 mouse_genomes_project 2 2889648 2924388 - Cdc123 protein_coding retained_intron MGP_LPJ_T0052276.1 MGP_LPJ_G0025253.1 mouse_genomes_project 2 2899070 2901065 - Cdc123 protein_coding retained_intron MGP_LPJ_T0052277.1 MGP_LPJ_G0025253.1 mouse_genomes_project 2 2900761 2924298 - Cdc123 protein_coding processed_transcript MGP_LPJ_T0053159.1 MGP_LPJ_G0025411.1 mouse_genomes_project 2 24135818 24190344 - MGP_LPJ_P0053159 Ccdc187 protein_coding unknown_likely_coding MGP_LPJ_T0053161.1 MGP_LPJ_G0025411.1 mouse_genomes_project 2 24163413 24190518 - MGP_LPJ_P0053161 Ccdc187 protein_coding protein_coding MGP_LPJ_T0053162.1 MGP_LPJ_G0025411.1 mouse_genomes_project 2 24177401 24184103 - MGP_LPJ_P0053162 Ccdc187 protein_coding protein_coding MGP_LPJ_T0058023.1 MGP_LPJ_G0026561.1 mouse_genomes_project 2 154341332 154342022 - MGP_LPJ_P0058023 C530025M09Rik protein_coding protein_coding MGP_LPJ_T0102034.1 MGP_LPJ_G0040071.1 mouse_genomes_project 2 87283996 87284970 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0053352.1 MGP_LPJ_G0025444.1 mouse_genomes_project 2 25185040 25356654 - MGP_LPJ_P0053352 Vav2 protein_coding protein_coding MGP_LPJ_T0053353.1 MGP_LPJ_G0025444.1 mouse_genomes_project 2 25185040 25356533 - MGP_LPJ_P0053353 Vav2 protein_coding nonsense_mediated_decay MGP_LPJ_T0053354.1 MGP_LPJ_G0025444.1 mouse_genomes_project 2 25191391 25199952 - Vav2 protein_coding processed_transcript MGP_LPJ_T0053355.1 MGP_LPJ_G0025444.1 mouse_genomes_project 2 25191855 25201490 - Vav2 protein_coding processed_transcript MGP_LPJ_T0053356.1 MGP_LPJ_G0025444.1 mouse_genomes_project 2 25192517 25194735 - Vav2 protein_coding processed_transcript MGP_LPJ_T0053357.1 MGP_LPJ_G0025444.1 mouse_genomes_project 2 25192517 25194812 - Vav2 protein_coding processed_transcript MGP_LPJ_T0053358.1 MGP_LPJ_G0025444.1 mouse_genomes_project 2 25224615 25269386 - Vav2 protein_coding processed_transcript MGP_LPJ_T0013497.1 MGP_LPJ_G0011588.1 mouse_genomes_project 2 50064671 50066837 + processed_pseudogene processed_pseudogene MGP_LPJ_T0052545.1 MGP_LPJ_G0025296.1 mouse_genomes_project 2 12500793 12535168 + MGP_LPJ_P0052545 Arl5b protein_coding protein_coding MGP_LPJ_T0052547.1 MGP_LPJ_G0025296.1 mouse_genomes_project 2 12506638 12535172 + MGP_LPJ_P0052547 Arl5b protein_coding protein_coding MGP_LPJ_T0052548.1 MGP_LPJ_G0025296.1 mouse_genomes_project 2 12506685 12529327 + MGP_LPJ_P0052548 Arl5b protein_coding nonsense_mediated_decay MGP_LPJ_T0052549.1 MGP_LPJ_G0025296.1 mouse_genomes_project 2 12506745 12530287 + MGP_LPJ_P0052549 Arl5b protein_coding protein_coding MGP_LPJ_T0052550.1 MGP_LPJ_G0025296.1 mouse_genomes_project 2 12520870 12529337 + MGP_LPJ_P0052550 Arl5b protein_coding nonsense_mediated_decay MGP_LPJ_T0052551.1 MGP_LPJ_G0025296.1 mouse_genomes_project 2 12522693 12525903 + Arl5b protein_coding retained_intron MGP_LPJ_T0052552.1 MGP_LPJ_G0025296.1 mouse_genomes_project 2 12527730 12535168 + MGP_LPJ_P0052552 Arl5b protein_coding protein_coding MGP_LPJ_T0058425.1 MGP_LPJ_G0026673.1 mouse_genomes_project 2 160489626 160537235 + MGP_LPJ_P0058425 Acss2 protein_coding protein_coding MGP_LPJ_T0058426.1 MGP_LPJ_G0026673.1 mouse_genomes_project 2 160489711 160496927 + Acss2 protein_coding retained_intron MGP_LPJ_T0058427.1 MGP_LPJ_G0026673.1 mouse_genomes_project 2 160489735 160561203 + MGP_LPJ_P0058427 Acss2 protein_coding protein_coding MGP_LPJ_T0058428.1 MGP_LPJ_G0026673.1 mouse_genomes_project 2 160489747 160526822 + Acss2 protein_coding retained_intron MGP_LPJ_T0058429.1 MGP_LPJ_G0026673.1 mouse_genomes_project 2 160489785 160536569 + MGP_LPJ_P0058429 Acss2 protein_coding protein_coding MGP_LPJ_T0058430.1 MGP_LPJ_G0026673.1 mouse_genomes_project 2 160489785 160536569 + MGP_LPJ_P0058430 Acss2 protein_coding nonsense_mediated_decay MGP_LPJ_T0058431.1 MGP_LPJ_G0026673.1 mouse_genomes_project 2 160523654 160524292 + Acss2 protein_coding retained_intron MGP_LPJ_T0058432.1 MGP_LPJ_G0026673.1 mouse_genomes_project 2 160523665 160531789 + MGP_LPJ_P0058432 Acss2 protein_coding protein_coding MGP_LPJ_T0058437.1 MGP_LPJ_G0026673.1 mouse_genomes_project 2 160543061 160560745 + Acss2 protein_coding processed_transcript MGP_LPJ_T0058438.1 MGP_LPJ_G0026673.1 mouse_genomes_project 2 160548251 160552379 + Acss2 protein_coding retained_intron MGP_LPJ_T0055516.1 MGP_LPJ_G0025844.1 mouse_genomes_project 2 85333688 85358449 + MGP_LPJ_P0055516 Slc43a1 protein_coding protein_coding MGP_LPJ_T0055517.1 MGP_LPJ_G0025844.1 mouse_genomes_project 2 85334233 85344967 + MGP_LPJ_P0055517 Slc43a1 protein_coding protein_coding MGP_LPJ_T0055518.1 MGP_LPJ_G0025844.1 mouse_genomes_project 2 85334246 85358457 + MGP_LPJ_P0055518 Slc43a1 protein_coding protein_coding MGP_LPJ_T0055519.1 MGP_LPJ_G0025844.1 mouse_genomes_project 2 85334255 85357259 + Slc43a1 protein_coding retained_intron MGP_LPJ_T0055520.1 MGP_LPJ_G0025844.1 mouse_genomes_project 2 85335036 85358452 + MGP_LPJ_P0055520 Slc43a1 protein_coding protein_coding MGP_LPJ_T0055521.1 MGP_LPJ_G0025844.1 mouse_genomes_project 2 85335462 85358465 + MGP_LPJ_P0055521 Slc43a1 protein_coding protein_coding MGP_LPJ_T0098234.1 MGP_LPJ_G0036515.1 mouse_genomes_project 2 108344539 108344655 + n-R5s201 rRNA rRNA MGP_LPJ_T0055358.1 MGP_LPJ_G0025807.1 mouse_genomes_project 2 79248086 79252935 + MGP_LPJ_P0055358 Ube2e3 protein_coding protein_coding MGP_LPJ_T0055359.1 MGP_LPJ_G0025807.1 mouse_genomes_project 2 79248200 79299806 + MGP_LPJ_P0055359 Ube2e3 protein_coding protein_coding MGP_LPJ_T0055360.1 MGP_LPJ_G0025807.1 mouse_genomes_project 2 79249919 79308875 + MGP_LPJ_P0055360 Ube2e3 protein_coding protein_coding MGP_LPJ_T0055361.1 MGP_LPJ_G0025807.1 mouse_genomes_project 2 79250112 79300618 + Ube2e3 protein_coding retained_intron MGP_LPJ_T0055362.1 MGP_LPJ_G0025807.1 mouse_genomes_project 2 79250206 79255087 + Ube2e3 protein_coding retained_intron MGP_LPJ_T0055363.1 MGP_LPJ_G0025807.1 mouse_genomes_project 2 79250550 79307879 + MGP_LPJ_P0055363 Ube2e3 protein_coding protein_coding MGP_LPJ_T0055364.1 MGP_LPJ_G0025807.1 mouse_genomes_project 2 79305416 79307634 + Ube2e3 protein_coding retained_intron MGP_LPJ_T0001084.1 MGP_LPJ_G0001009.1 mouse_genomes_project 2 12483193 12485577 - TEC TEC MGP_LPJ_T0010512.1 MGP_LPJ_G0008630.1 mouse_genomes_project 2 186920501 186920605 + Mir133a-2 miRNA miRNA MGP_LPJ_T0004036.1 MGP_LPJ_G0003593.1 mouse_genomes_project 2 77785903 77804814 + Gm13944 antisense antisense MGP_LPJ_T0004037.1 MGP_LPJ_G0003593.1 mouse_genomes_project 2 77785911 77805159 + Gm13944 antisense antisense MGP_LPJ_T0055891.1 MGP_LPJ_G0026079.1 mouse_genomes_project 2 92569624 92582039 - MGP_LPJ_P0055891 Slc39a13 protein_coding protein_coding MGP_LPJ_T0055892.1 MGP_LPJ_G0026079.1 mouse_genomes_project 2 92569624 92581851 - MGP_LPJ_P0055892 Slc39a13 protein_coding protein_coding MGP_LPJ_T0055893.1 MGP_LPJ_G0026079.1 mouse_genomes_project 2 92570706 92581905 - MGP_LPJ_P0055893 Slc39a13 protein_coding protein_coding MGP_LPJ_T0055894.1 MGP_LPJ_G0026079.1 mouse_genomes_project 2 92570954 92573279 - Slc39a13 protein_coding processed_transcript MGP_LPJ_T0055895.1 MGP_LPJ_G0026079.1 mouse_genomes_project 2 92570957 92572219 - Slc39a13 protein_coding processed_transcript MGP_LPJ_T0055896.1 MGP_LPJ_G0026079.1 mouse_genomes_project 2 92571237 92581920 - Slc39a13 protein_coding processed_transcript MGP_LPJ_T0055897.1 MGP_LPJ_G0026079.1 mouse_genomes_project 2 92572473 92574009 - Slc39a13 protein_coding processed_transcript MGP_LPJ_T0055898.1 MGP_LPJ_G0026079.1 mouse_genomes_project 2 92573413 92581861 - Slc39a13 protein_coding processed_transcript MGP_LPJ_T0055899.1 MGP_LPJ_G0026079.1 mouse_genomes_project 2 92573878 92581809 - MGP_LPJ_P0055899 Slc39a13 protein_coding protein_coding MGP_LPJ_T0055900.1 MGP_LPJ_G0026079.1 mouse_genomes_project 2 92580052 92580493 - Slc39a13 protein_coding processed_transcript MGP_LPJ_T0055901.1 MGP_LPJ_G0026079.1 mouse_genomes_project 2 92580739 92581861 - Slc39a13 protein_coding processed_transcript MGP_LPJ_T0100628.1 MGP_LPJ_G0038891.1 mouse_genomes_project 2 155721311 155721447 + snoRNA snoRNA MGP_LPJ_T0055726.1 MGP_LPJ_G0025997.1 mouse_genomes_project 2 89821471 89822410 + MGP_LPJ_P0055726 Olfr1188 protein_coding protein_coding MGP_LPJ_T0007263.1 MGP_LPJ_G0005958.1 mouse_genomes_project 2 79852409 79859568 + Gm26755 lincRNA lincRNA MGP_LPJ_T0056931.1 MGP_LPJ_G0026307.1 mouse_genomes_project 2 123742793 123755511 + MGP_LPJ_P0056931 Haus2 protein_coding nonsense_mediated_decay MGP_LPJ_T0056932.1 MGP_LPJ_G0026307.1 mouse_genomes_project 2 123742863 123754823 + MGP_LPJ_P0056932 Haus2 protein_coding protein_coding MGP_LPJ_T0055788.1 MGP_LPJ_G0026048.1 mouse_genomes_project 2 91082844 91083789 - MGP_LPJ_P0055788 Olfr1252 protein_coding protein_coding MGP_LPJ_T0100609.1 MGP_LPJ_G0038872.1 mouse_genomes_project 2 122836251 122836380 - Gm25857 snoRNA snoRNA MGP_LPJ_T0053404.1 MGP_LPJ_G0025456.1 mouse_genomes_project 2 26526250 26559440 + MGP_LPJ_P0053404 Ralgds protein_coding protein_coding MGP_LPJ_T0053405.1 MGP_LPJ_G0025456.1 mouse_genomes_project 2 26526451 26569963 + MGP_LPJ_P0053405 Ralgds protein_coding protein_coding MGP_LPJ_T0053406.1 MGP_LPJ_G0025456.1 mouse_genomes_project 2 26548722 26569948 + MGP_LPJ_P0053406 Ralgds protein_coding protein_coding MGP_LPJ_T0053407.1 MGP_LPJ_G0025456.1 mouse_genomes_project 2 26548909 26569518 + MGP_LPJ_P0053407 Ralgds protein_coding protein_coding MGP_LPJ_T0053408.1 MGP_LPJ_G0025456.1 mouse_genomes_project 2 26548916 26569952 + Ralgds protein_coding retained_intron MGP_LPJ_T0053409.1 MGP_LPJ_G0025456.1 mouse_genomes_project 2 26556065 26559392 + Ralgds protein_coding retained_intron MGP_LPJ_T0053410.1 MGP_LPJ_G0025456.1 mouse_genomes_project 2 26558822 26561958 + MGP_LPJ_P0053410 Ralgds protein_coding nonsense_mediated_decay MGP_LPJ_T0053411.1 MGP_LPJ_G0025456.1 mouse_genomes_project 2 26562174 26564102 + Ralgds protein_coding retained_intron MGP_LPJ_T0053412.1 MGP_LPJ_G0025456.1 mouse_genomes_project 2 26564431 26565858 + Ralgds protein_coding retained_intron MGP_LPJ_T0053413.1 MGP_LPJ_G0025456.1 mouse_genomes_project 2 26565939 26569207 + MGP_LPJ_P0053413 Ralgds protein_coding protein_coding MGP_LPJ_T0102073.1 MGP_LPJ_G0040110.1 mouse_genomes_project 2 158505276 158547401 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013420.1 MGP_LPJ_G0011511.1 mouse_genomes_project 2 18892550 18892886 + processed_pseudogene processed_pseudogene MGP_LPJ_T0055955.1 MGP_LPJ_G0026086.1 mouse_genomes_project 2 92785088 92790714 + MGP_LPJ_P0055955 Pacsin3 protein_coding protein_coding MGP_LPJ_T0055956.1 MGP_LPJ_G0026086.1 mouse_genomes_project 2 92785249 92786263 + Pacsin3 protein_coding retained_intron MGP_LPJ_T0055957.1 MGP_LPJ_G0026086.1 mouse_genomes_project 2 92785278 92789686 + MGP_LPJ_P0055957 Pacsin3 protein_coding protein_coding MGP_LPJ_T0055958.1 MGP_LPJ_G0026086.1 mouse_genomes_project 2 92785296 92793804 + MGP_LPJ_P0055958 Pacsin3 protein_coding protein_coding MGP_LPJ_T0055959.1 MGP_LPJ_G0026086.1 mouse_genomes_project 2 92785947 92790391 + MGP_LPJ_P0055959 Pacsin3 protein_coding protein_coding MGP_LPJ_T0055960.1 MGP_LPJ_G0026086.1 mouse_genomes_project 2 92785947 92793803 + MGP_LPJ_P0055960 Pacsin3 protein_coding protein_coding MGP_LPJ_T0055961.1 MGP_LPJ_G0026086.1 mouse_genomes_project 2 92785947 92793804 + MGP_LPJ_P0055961 Pacsin3 protein_coding protein_coding MGP_LPJ_T0055962.1 MGP_LPJ_G0026086.1 mouse_genomes_project 2 92785972 92790480 + MGP_LPJ_P0055962 Pacsin3 protein_coding protein_coding MGP_LPJ_T0055963.1 MGP_LPJ_G0026086.1 mouse_genomes_project 2 92786463 92793804 + MGP_LPJ_P0055963 Pacsin3 protein_coding protein_coding MGP_LPJ_T0055964.1 MGP_LPJ_G0026086.1 mouse_genomes_project 2 92786469 92790446 + MGP_LPJ_P0055964 Pacsin3 protein_coding protein_coding MGP_LPJ_T0055965.1 MGP_LPJ_G0026086.1 mouse_genomes_project 2 92788350 92789374 + Pacsin3 protein_coding processed_transcript MGP_LPJ_T0055966.1 MGP_LPJ_G0026086.1 mouse_genomes_project 2 92788973 92790743 + MGP_LPJ_P0055966 Pacsin3 protein_coding protein_coding MGP_LPJ_T0055967.1 MGP_LPJ_G0026086.1 mouse_genomes_project 2 92789949 92790814 + Pacsin3 protein_coding retained_intron MGP_LPJ_T0055968.1 MGP_LPJ_G0026086.1 mouse_genomes_project 2 92792037 92792658 + Pacsin3 protein_coding retained_intron MGP_LPJ_T0055969.1 MGP_LPJ_G0026086.1 mouse_genomes_project 2 92792230 92793484 + MGP_LPJ_P0055969 Pacsin3 protein_coding protein_coding MGP_LPJ_T0013694.1 MGP_LPJ_G0011785.1 mouse_genomes_project 2 121494102 121494961 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010394.1 MGP_LPJ_G0008512.1 mouse_genomes_project 2 11701063 11701142 + Mir511 miRNA miRNA MGP_LPJ_T0017742.1 MGP_LPJ_G0015352.1 mouse_genomes_project 2 87821246 87822566 - Gm13723 processed_transcript processed_transcript MGP_LPJ_T0056192.1 MGP_LPJ_G0026123.1 mouse_genomes_project 2 95750004 95787497 - Hsd17b12 protein_coding processed_transcript MGP_LPJ_T0056193.1 MGP_LPJ_G0026123.1 mouse_genomes_project 2 95750004 95883593 - MGP_LPJ_P0056193 Hsd17b12 protein_coding protein_coding MGP_LPJ_T0056194.1 MGP_LPJ_G0026123.1 mouse_genomes_project 2 95750017 95883537 - Hsd17b12 protein_coding processed_transcript MGP_LPJ_T0056195.1 MGP_LPJ_G0026123.1 mouse_genomes_project 2 95750837 95787792 - Hsd17b12 protein_coding processed_transcript MGP_LPJ_T0056196.1 MGP_LPJ_G0026123.1 mouse_genomes_project 2 95838879 95883521 - Hsd17b12 protein_coding processed_transcript MGP_LPJ_T0010426.1 MGP_LPJ_G0008544.1 mouse_genomes_project 2 31070518 31070591 - Mir3960 miRNA miRNA MGP_LPJ_T0007301.1 MGP_LPJ_G0005989.1 mouse_genomes_project 2 108975578 108981627 - Gm14014 lincRNA lincRNA MGP_LPJ_T0010365.1 MGP_LPJ_G0008483.1 mouse_genomes_project 2 7731888 7732015 + Gm26073 miRNA miRNA MGP_LPJ_T0102004.1 MGP_LPJ_G0040041.1 mouse_genomes_project 2 18679376 18786094 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013838.1 MGP_LPJ_G0011929.1 mouse_genomes_project 2 185676267 185676854 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001117.1 MGP_LPJ_G0001042.1 mouse_genomes_project 2 70416999 70417720 - TEC TEC MGP_LPJ_T0054449.1 MGP_LPJ_G0025641.1 mouse_genomes_project 2 37691312 37743979 - MGP_LPJ_P0054449 Golga1 protein_coding protein_coding MGP_LPJ_T0054450.1 MGP_LPJ_G0025641.1 mouse_genomes_project 2 37691418 37743926 - MGP_LPJ_P0054450 Golga1 protein_coding protein_coding MGP_LPJ_T0054451.1 MGP_LPJ_G0025641.1 mouse_genomes_project 2 37691660 37730846 - MGP_LPJ_P0054451 Golga1 protein_coding nonsense_mediated_decay MGP_LPJ_T0054452.1 MGP_LPJ_G0025641.1 mouse_genomes_project 2 37691936 37693564 - Golga1 protein_coding processed_transcript MGP_LPJ_T0054453.1 MGP_LPJ_G0025641.1 mouse_genomes_project 2 37692810 37693724 - Golga1 protein_coding retained_intron MGP_LPJ_T0054454.1 MGP_LPJ_G0025641.1 mouse_genomes_project 2 37692810 37743926 - MGP_LPJ_P0054454 Golga1 protein_coding nonsense_mediated_decay MGP_LPJ_T0054455.1 MGP_LPJ_G0025641.1 mouse_genomes_project 2 37692970 37694719 - MGP_LPJ_P0054455 Golga1 protein_coding nonsense_mediated_decay MGP_LPJ_T0054456.1 MGP_LPJ_G0025641.1 mouse_genomes_project 2 37693311 37694399 - Golga1 protein_coding retained_intron MGP_LPJ_T0054457.1 MGP_LPJ_G0025641.1 mouse_genomes_project 2 37697869 37743926 - Golga1 protein_coding retained_intron MGP_LPJ_T0054458.1 MGP_LPJ_G0025641.1 mouse_genomes_project 2 37718608 37733954 - MGP_LPJ_P0054458 Golga1 protein_coding protein_coding MGP_LPJ_T0054459.1 MGP_LPJ_G0025641.1 mouse_genomes_project 2 37724086 37743923 - Golga1 protein_coding retained_intron MGP_LPJ_T0057402.1 MGP_LPJ_G0026408.1 mouse_genomes_project 2 131377236 131418151 + Acoxl protein_coding processed_transcript MGP_LPJ_T0057403.1 MGP_LPJ_G0026408.1 mouse_genomes_project 2 131394439 131680058 + MGP_LPJ_P0057403 Acoxl protein_coding protein_coding MGP_LPJ_T0057404.1 MGP_LPJ_G0026408.1 mouse_genomes_project 2 131450120 131679693 + MGP_LPJ_P0057404 Acoxl protein_coding protein_coding MGP_LPJ_T0013733.1 MGP_LPJ_G0011824.1 mouse_genomes_project 2 137077890 137078500 + processed_pseudogene processed_pseudogene MGP_LPJ_T0056489.1 MGP_LPJ_G0026184.1 mouse_genomes_project 2 112910982 112913249 - MGP_LPJ_P0056489 Fibin protein_coding protein_coding MGP_LPJ_T0004027.1 MGP_LPJ_G0003587.1 mouse_genomes_project 2 73818640 73820634 + Chn1os1 antisense antisense MGP_LPJ_T0007213.1 MGP_LPJ_G0005917.1 mouse_genomes_project 2 50546397 50548311 - Gm13499 lincRNA lincRNA MGP_LPJ_T0013745.1 MGP_LPJ_G0011836.1 mouse_genomes_project 2 145988229 145989774 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010470.1 MGP_LPJ_G0008588.1 mouse_genomes_project 2 123131126 123131189 + Mir7665 miRNA miRNA MGP_LPJ_T0013578.1 MGP_LPJ_G0011669.1 mouse_genomes_project 2 78960678 78961931 + processed_pseudogene processed_pseudogene MGP_LPJ_T0057454.1 MGP_LPJ_G0026423.1 mouse_genomes_project 2 132819246 132834152 + MGP_LPJ_P0057454 Slc20a1 protein_coding protein_coding MGP_LPJ_T0057455.1 MGP_LPJ_G0026423.1 mouse_genomes_project 2 132819281 132826848 + MGP_LPJ_P0057455 Slc20a1 protein_coding unknown_likely_coding MGP_LPJ_T0057456.1 MGP_LPJ_G0026423.1 mouse_genomes_project 2 132819283 132823716 + Slc20a1 protein_coding retained_intron MGP_LPJ_T0057457.1 MGP_LPJ_G0026423.1 mouse_genomes_project 2 132819285 132827639 + Slc20a1 protein_coding processed_transcript MGP_LPJ_T0057458.1 MGP_LPJ_G0026423.1 mouse_genomes_project 2 132819285 132823714 + Slc20a1 protein_coding retained_intron MGP_LPJ_T0057459.1 MGP_LPJ_G0026423.1 mouse_genomes_project 2 132819626 132822354 + MGP_LPJ_P0057459 Slc20a1 protein_coding protein_coding MGP_LPJ_T0057460.1 MGP_LPJ_G0026423.1 mouse_genomes_project 2 132819792 132834145 + MGP_LPJ_P0057460 Slc20a1 protein_coding protein_coding MGP_LPJ_T0057461.1 MGP_LPJ_G0026423.1 mouse_genomes_project 2 132828855 132830794 + Slc20a1 protein_coding retained_intron MGP_LPJ_T0057462.1 MGP_LPJ_G0026423.1 mouse_genomes_project 2 132829895 132830562 + Slc20a1 protein_coding retained_intron MGP_LPJ_T0053096.1 MGP_LPJ_G0025395.1 mouse_genomes_project 2 23524431 23529254 + MGP_LPJ_P0053096 Lcn6 protein_coding protein_coding MGP_LPJ_T0053097.1 MGP_LPJ_G0025395.1 mouse_genomes_project 2 23526911 23529251 + MGP_LPJ_P0053097 Lcn6 protein_coding protein_coding MGP_LPJ_T0053098.1 MGP_LPJ_G0025395.1 mouse_genomes_project 2 23527606 23529247 + MGP_LPJ_P0053098 Lcn6 protein_coding protein_coding MGP_LPJ_T0053099.1 MGP_LPJ_G0025395.1 mouse_genomes_project 2 23527758 23529247 + Lcn6 protein_coding processed_transcript MGP_LPJ_T0057360.1 MGP_LPJ_G0026396.1 mouse_genomes_project 2 130881871 130885910 + MGP_LPJ_P0057360 Adra2b protein_coding protein_coding MGP_LPJ_T0057361.1 MGP_LPJ_G0026396.1 mouse_genomes_project 2 130881949 130885910 + MGP_LPJ_P0057361 Adra2b protein_coding protein_coding MGP_LPJ_T0010491.1 MGP_LPJ_G0008609.1 mouse_genomes_project 2 162666731 162666818 - Gm23134 miRNA miRNA MGP_LPJ_T0056405.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107971653 108004188 + MGP_LPJ_P0056405 Pax6 protein_coding protein_coding MGP_LPJ_T0056406.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107971653 108004188 + MGP_LPJ_P0056406 Pax6 protein_coding protein_coding MGP_LPJ_T0056407.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107971673 108003286 + Pax6 protein_coding processed_transcript MGP_LPJ_T0056408.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107971688 107988960 + MGP_LPJ_P0056408 Pax6 protein_coding protein_coding MGP_LPJ_T0056409.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107974698 108004066 + MGP_LPJ_P0056409 Pax6 protein_coding protein_coding MGP_LPJ_T0056410.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107976799 107978758 + Pax6 protein_coding processed_transcript MGP_LPJ_T0056411.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107977990 107978900 + Pax6 protein_coding processed_transcript MGP_LPJ_T0056412.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107978072 107978704 + Pax6 protein_coding retained_intron MGP_LPJ_T0056413.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107978072 108004066 + MGP_LPJ_P0056413 Pax6 protein_coding protein_coding MGP_LPJ_T0056414.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107978314 108004168 + MGP_LPJ_P0056414 Pax6 protein_coding protein_coding MGP_LPJ_T0056415.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107978394 108004185 + MGP_LPJ_P0056415 Pax6 protein_coding protein_coding MGP_LPJ_T0056416.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107978408 108003895 + MGP_LPJ_P0056416 Pax6 protein_coding protein_coding MGP_LPJ_T0056417.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107979055 108003895 + MGP_LPJ_P0056417 Pax6 protein_coding protein_coding MGP_LPJ_T0056418.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107979056 108004185 + MGP_LPJ_P0056418 Pax6 protein_coding protein_coding MGP_LPJ_T0056419.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107982685 107990966 + MGP_LPJ_P0056419 Pax6 protein_coding protein_coding MGP_LPJ_T0056420.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107984161 107999055 + Pax6 protein_coding processed_transcript MGP_LPJ_T0056421.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107986827 107990153 + Pax6 protein_coding retained_intron MGP_LPJ_T0056422.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107987578 107999066 + Pax6 protein_coding processed_transcript MGP_LPJ_T0056423.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107987623 107999098 + Pax6 protein_coding processed_transcript MGP_LPJ_T0056424.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107987650 108003177 + Pax6 protein_coding retained_intron MGP_LPJ_T0056425.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107987652 107998485 + Pax6 protein_coding processed_transcript MGP_LPJ_T0056426.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107987662 107999076 + Pax6 protein_coding processed_transcript MGP_LPJ_T0056427.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107987752 107998456 + Pax6 protein_coding processed_transcript MGP_LPJ_T0056428.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107988843 107990114 + Pax6 protein_coding retained_intron MGP_LPJ_T0056429.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107990492 108004188 + Pax6 protein_coding processed_transcript MGP_LPJ_T0056430.1 MGP_LPJ_G0026169.1 mouse_genomes_project 2 107999315 107999958 + Pax6 protein_coding retained_intron MGP_LPJ_T0059431.1 MGP_LPJ_G0026897.1 mouse_genomes_project 2 180362850 180375575 + MGP_LPJ_P0059431 Npepl1 protein_coding protein_coding MGP_LPJ_T0059432.1 MGP_LPJ_G0026897.1 mouse_genomes_project 2 180363655 180372884 + MGP_LPJ_P0059432 Npepl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0059433.1 MGP_LPJ_G0026897.1 mouse_genomes_project 2 180363681 180375204 + Npepl1 protein_coding retained_intron MGP_LPJ_T0059434.1 MGP_LPJ_G0026897.1 mouse_genomes_project 2 180364074 180368605 + Npepl1 protein_coding retained_intron MGP_LPJ_T0055237.1 MGP_LPJ_G0025779.1 mouse_genomes_project 2 74857854 74865354 + Hoxd11 protein_coding processed_transcript MGP_LPJ_T0055238.1 MGP_LPJ_G0025779.1 mouse_genomes_project 2 74860620 74862477 + MGP_LPJ_P0055238 Hoxd11 protein_coding protein_coding MGP_LPJ_T0057794.1 MGP_LPJ_G0026496.1 mouse_genomes_project 2 140672847 140743996 + MGP_LPJ_P0057794 Snap25 protein_coding protein_coding MGP_LPJ_T0057795.1 MGP_LPJ_G0026496.1 mouse_genomes_project 2 140672848 140724550 + Snap25 protein_coding retained_intron MGP_LPJ_T0057796.1 MGP_LPJ_G0026496.1 mouse_genomes_project 2 140672872 140742918 + MGP_LPJ_P0057796 Snap25 protein_coding protein_coding MGP_LPJ_T0057894.1 MGP_LPJ_G0026523.1 mouse_genomes_project 2 148723477 148780494 - MGP_LPJ_P0057894 Dzank1 protein_coding protein_coding MGP_LPJ_T0057895.1 MGP_LPJ_G0026523.1 mouse_genomes_project 2 148723479 148780510 - MGP_LPJ_P0057895 Dzank1 protein_coding protein_coding MGP_LPJ_T0057896.1 MGP_LPJ_G0026523.1 mouse_genomes_project 2 148761709 148780460 - Dzank1 protein_coding retained_intron MGP_LPJ_T0057897.1 MGP_LPJ_G0026523.1 mouse_genomes_project 2 148775564 148779743 - Dzank1 protein_coding processed_transcript MGP_LPJ_T0053264.1 MGP_LPJ_G0025425.1 mouse_genomes_project 2 24534509 24542550 + MGP_LPJ_P0053264 Fam69b protein_coding protein_coding MGP_LPJ_T0053265.1 MGP_LPJ_G0025425.1 mouse_genomes_project 2 24534546 24539060 + Fam69b protein_coding processed_transcript MGP_LPJ_T0053266.1 MGP_LPJ_G0025425.1 mouse_genomes_project 2 24540255 24541078 + Fam69b protein_coding processed_transcript MGP_LPJ_T0099324.1 MGP_LPJ_G0037587.1 mouse_genomes_project 2 30945288 30945393 - Gm23369 snRNA snRNA MGP_LPJ_T0013598.1 MGP_LPJ_G0011689.1 mouse_genomes_project 2 83962259 83962469 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013653.1 MGP_LPJ_G0011744.1 mouse_genomes_project 2 104377730 104378024 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010413.1 MGP_LPJ_G0008531.1 mouse_genomes_project 2 27936000 27936065 + Mir219b miRNA miRNA MGP_LPJ_T0052890.1 MGP_LPJ_G0025356.1 mouse_genomes_project 2 23028907 23032409 + MGP_LPJ_P0052890 Fam166a protein_coding protein_coding MGP_LPJ_T0052891.1 MGP_LPJ_G0025356.1 mouse_genomes_project 2 23031520 23032409 + Fam166a protein_coding processed_transcript MGP_LPJ_T0053340.1 MGP_LPJ_G0025442.1 mouse_genomes_project 2 25082456 25100072 + MGP_LPJ_P0053340 Dbh protein_coding protein_coding MGP_LPJ_T0053341.1 MGP_LPJ_G0025442.1 mouse_genomes_project 2 25093964 25094244 + Dbh protein_coding processed_transcript MGP_LPJ_T0054400.1 MGP_LPJ_G0025631.1 mouse_genomes_project 2 36410788 36912658 - MGP_LPJ_P0054400 Dennd1a protein_coding protein_coding MGP_LPJ_T0054401.1 MGP_LPJ_G0025631.1 mouse_genomes_project 2 36412869 36465536 - MGP_LPJ_P0054401 Dennd1a protein_coding protein_coding MGP_LPJ_T0054402.1 MGP_LPJ_G0025631.1 mouse_genomes_project 2 36429920 36912673 - MGP_LPJ_P0054402 Dennd1a protein_coding nonsense_mediated_decay MGP_LPJ_T0054403.1 MGP_LPJ_G0025631.1 mouse_genomes_project 2 36551048 36912660 - MGP_LPJ_P0054403 Dennd1a protein_coding nonsense_mediated_decay MGP_LPJ_T0054404.1 MGP_LPJ_G0025631.1 mouse_genomes_project 2 36551093 36912471 - MGP_LPJ_P0054404 Dennd1a protein_coding protein_coding MGP_LPJ_T0054405.1 MGP_LPJ_G0025631.1 mouse_genomes_project 2 36640434 36783774 - Dennd1a protein_coding retained_intron MGP_LPJ_T0054406.1 MGP_LPJ_G0025631.1 mouse_genomes_project 2 36662259 36912641 - MGP_LPJ_P0054406 Dennd1a protein_coding nonsense_mediated_decay MGP_LPJ_T0054407.1 MGP_LPJ_G0025631.1 mouse_genomes_project 2 36742687 36912501 - MGP_LPJ_P0054407 Dennd1a protein_coding nonsense_mediated_decay MGP_LPJ_T0054408.1 MGP_LPJ_G0025631.1 mouse_genomes_project 2 36776943 36866134 - Dennd1a protein_coding retained_intron MGP_LPJ_T0054409.1 MGP_LPJ_G0025631.1 mouse_genomes_project 2 36781430 36785512 - Dennd1a protein_coding retained_intron MGP_LPJ_T0054410.1 MGP_LPJ_G0025631.1 mouse_genomes_project 2 36858474 36912497 - Dennd1a protein_coding retained_intron MGP_LPJ_T0055407.1 MGP_LPJ_G0025817.1 mouse_genomes_project 2 80942318 81031801 - MGP_LPJ_P0055407 Nckap1 protein_coding protein_coding MGP_LPJ_T0055408.1 MGP_LPJ_G0025817.1 mouse_genomes_project 2 80942324 81031917 - MGP_LPJ_P0055408 Nckap1 protein_coding protein_coding MGP_LPJ_T0055409.1 MGP_LPJ_G0025817.1 mouse_genomes_project 2 80949527 80969413 - Nckap1 protein_coding processed_transcript MGP_LPJ_T0055410.1 MGP_LPJ_G0025817.1 mouse_genomes_project 2 80993295 81005145 - Nckap1 protein_coding processed_transcript MGP_LPJ_T0055411.1 MGP_LPJ_G0025817.1 mouse_genomes_project 2 80997113 81004865 - Nckap1 protein_coding processed_transcript MGP_LPJ_T0056114.1 MGP_LPJ_G0026110.1 mouse_genomes_project 2 94579992 94621465 + MGP_LPJ_P0056114 Syt13 protein_coding protein_coding MGP_LPJ_T0059081.1 MGP_LPJ_G0026819.1 mouse_genomes_project 2 170533945 170535857 + MGP_LPJ_P0059081 Slc12a5 protein_coding nonsense_mediated_decay MGP_LPJ_T0059082.1 MGP_LPJ_G0026819.1 mouse_genomes_project 2 170533959 170547552 + Slc12a5 protein_coding processed_transcript MGP_LPJ_T0059083.1 MGP_LPJ_G0026819.1 mouse_genomes_project 2 170533967 170574291 + MGP_LPJ_P0059083 Slc12a5 protein_coding protein_coding MGP_LPJ_T0059084.1 MGP_LPJ_G0026819.1 mouse_genomes_project 2 170533989 170576432 + MGP_LPJ_P0059084 Slc12a5 protein_coding protein_coding MGP_LPJ_T0059085.1 MGP_LPJ_G0026819.1 mouse_genomes_project 2 170541047 170576441 + MGP_LPJ_P0059085 Slc12a5 protein_coding protein_coding MGP_LPJ_T0059086.1 MGP_LPJ_G0026819.1 mouse_genomes_project 2 170541302 170576437 + MGP_LPJ_P0059086 Slc12a5 protein_coding protein_coding MGP_LPJ_T0059087.1 MGP_LPJ_G0026819.1 mouse_genomes_project 2 170541344 170564450 + MGP_LPJ_P0059087 Slc12a5 protein_coding nonsense_mediated_decay MGP_LPJ_T0059088.1 MGP_LPJ_G0026819.1 mouse_genomes_project 2 170556596 170560820 + Slc12a5 protein_coding retained_intron MGP_LPJ_T0059089.1 MGP_LPJ_G0026819.1 mouse_genomes_project 2 170573329 170576432 + Slc12a5 protein_coding retained_intron MGP_LPJ_T0017838.1 MGP_LPJ_G0015398.1 mouse_genomes_project 2 161892512 161910666 - 5430405H02Rik processed_transcript antisense MGP_LPJ_T0017839.1 MGP_LPJ_G0015398.1 mouse_genomes_project 2 161900580 161910597 - 5430405H02Rik processed_transcript antisense MGP_LPJ_T0017840.1 MGP_LPJ_G0015398.1 mouse_genomes_project 2 161900580 161910648 - 5430405H02Rik processed_transcript antisense MGP_LPJ_T0017841.1 MGP_LPJ_G0015398.1 mouse_genomes_project 2 161902259 161904010 - 5430405H02Rik processed_transcript retained_intron MGP_LPJ_T0058257.1 MGP_LPJ_G0026628.1 mouse_genomes_project 2 158071700 158118800 + MGP_LPJ_P0058257 Kif3b protein_coding protein_coding MGP_LPJ_T0053400.1 MGP_LPJ_G0025454.1 mouse_genomes_project 2 26509985 26516351 + Gbgt1 protein_coding processed_transcript MGP_LPJ_T0053401.1 MGP_LPJ_G0025454.1 mouse_genomes_project 2 26509985 26518504 + MGP_LPJ_P0053401 Gbgt1 protein_coding protein_coding MGP_LPJ_T0053402.1 MGP_LPJ_G0025454.1 mouse_genomes_project 2 26510826 26518504 + MGP_LPJ_P0053402 Gbgt1 protein_coding protein_coding MGP_LPJ_T0055860.1 MGP_LPJ_G0026074.1 mouse_genomes_project 2 92392667 92406227 - MGP_LPJ_P0055860 Ndufs3 protein_coding protein_coding MGP_LPJ_T0055861.1 MGP_LPJ_G0026074.1 mouse_genomes_project 2 92396401 92406042 - Ndufs3 protein_coding processed_transcript MGP_LPJ_T0055862.1 MGP_LPJ_G0026074.1 mouse_genomes_project 2 92405222 92406102 - Ndufs3 protein_coding processed_transcript MGP_LPJ_T0004034.1 MGP_LPJ_G0003591.1 mouse_genomes_project 2 75340702 75528316 + 2600014E21Rik antisense antisense MGP_LPJ_T0058385.1 MGP_LPJ_G0026665.1 mouse_genomes_project 2 159995694 160013062 - MGP_LPJ_P0058385 Gm4737 protein_coding protein_coding MGP_LPJ_T0058386.1 MGP_LPJ_G0026665.1 mouse_genomes_project 2 160002076 160013012 - MGP_LPJ_P0058386 Gm4737 protein_coding protein_coding MGP_LPJ_T0058387.1 MGP_LPJ_G0026665.1 mouse_genomes_project 2 160004870 160013012 - Gm4737 protein_coding retained_intron MGP_LPJ_T0013458.1 MGP_LPJ_G0011549.1 mouse_genomes_project 2 35621191 35621600 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100573.1 MGP_LPJ_G0038836.1 mouse_genomes_project 2 30534219 30534304 + Gm25632 snoRNA snoRNA MGP_LPJ_T0013677.1 MGP_LPJ_G0011768.1 mouse_genomes_project 2 111972746 111973232 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055683.1 MGP_LPJ_G0025958.1 mouse_genomes_project 2 88766735 88785531 - MGP_LPJ_P0055683 protein_coding protein_coding MGP_LPJ_T0055684.1 MGP_LPJ_G0025958.1 mouse_genomes_project 2 88783679 88785531 - protein_coding processed_transcript MGP_LPJ_T0056666.1 MGP_LPJ_G0026254.1 mouse_genomes_project 2 121690971 121726618 + MGP_LPJ_P0056666 Pak6 protein_coding protein_coding MGP_LPJ_T0056667.1 MGP_LPJ_G0026254.1 mouse_genomes_project 2 121691430 121692624 + Pak6 protein_coding retained_intron MGP_LPJ_T0056668.1 MGP_LPJ_G0026254.1 mouse_genomes_project 2 121691732 121705231 + Pak6 protein_coding processed_transcript MGP_LPJ_T0056669.1 MGP_LPJ_G0026254.1 mouse_genomes_project 2 121704689 121726616 + MGP_LPJ_P0056669 Pak6 protein_coding protein_coding MGP_LPJ_T0056670.1 MGP_LPJ_G0026254.1 mouse_genomes_project 2 121704723 121725765 + Pak6 protein_coding retained_intron MGP_LPJ_T0053492.1 MGP_LPJ_G0025471.1 mouse_genomes_project 2 27694519 27825692 + MGP_LPJ_P0053492 Rapgef1 protein_coding protein_coding MGP_LPJ_T0053493.1 MGP_LPJ_G0025471.1 mouse_genomes_project 2 27694540 27825702 + MGP_LPJ_P0053493 Rapgef1 protein_coding protein_coding MGP_LPJ_T0053494.1 MGP_LPJ_G0025471.1 mouse_genomes_project 2 27694569 27826321 + MGP_LPJ_P0053494 Rapgef1 protein_coding protein_coding MGP_LPJ_T0053495.1 MGP_LPJ_G0025471.1 mouse_genomes_project 2 27696690 27823666 + MGP_LPJ_P0053495 Rapgef1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053496.1 MGP_LPJ_G0025471.1 mouse_genomes_project 2 27785847 27825702 + MGP_LPJ_P0053496 Rapgef1 protein_coding protein_coding MGP_LPJ_T0053497.1 MGP_LPJ_G0025471.1 mouse_genomes_project 2 27814704 27821187 + Rapgef1 protein_coding processed_transcript MGP_LPJ_T0053498.1 MGP_LPJ_G0025471.1 mouse_genomes_project 2 27816664 27818327 + Rapgef1 protein_coding retained_intron MGP_LPJ_T0013640.1 MGP_LPJ_G0011731.1 mouse_genomes_project 2 98821534 98822204 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010454.1 MGP_LPJ_G0008572.1 mouse_genomes_project 2 94235793 94235868 + Mir7222 miRNA miRNA MGP_LPJ_T0017832.1 MGP_LPJ_G0015395.1 mouse_genomes_project 2 158126627 158131418 - 2500004C02Rik processed_transcript processed_transcript MGP_LPJ_T0017833.1 MGP_LPJ_G0015395.1 mouse_genomes_project 2 158128130 158128837 - 2500004C02Rik processed_transcript processed_transcript MGP_LPJ_T0017834.1 MGP_LPJ_G0015395.1 mouse_genomes_project 2 158128250 158131681 - 2500004C02Rik processed_transcript processed_transcript MGP_LPJ_T0099355.1 MGP_LPJ_G0037618.1 mouse_genomes_project 2 136569819 136569922 + Gm22245 snRNA snRNA MGP_LPJ_T0058617.1 MGP_LPJ_G0026700.1 mouse_genomes_project 2 161316162 161379352 + MGP_LPJ_P0058617 Cnbd2 protein_coding protein_coding MGP_LPJ_T0058618.1 MGP_LPJ_G0026700.1 mouse_genomes_project 2 161316441 161346461 + Cnbd2 protein_coding processed_transcript MGP_LPJ_T0058619.1 MGP_LPJ_G0026700.1 mouse_genomes_project 2 161316480 161325839 + Cnbd2 protein_coding retained_intron MGP_LPJ_T0058620.1 MGP_LPJ_G0026700.1 mouse_genomes_project 2 161316496 161379355 + MGP_LPJ_P0058620 Cnbd2 protein_coding protein_coding MGP_LPJ_T0058621.1 MGP_LPJ_G0026700.1 mouse_genomes_project 2 161341685 161347063 + Cnbd2 protein_coding processed_transcript MGP_LPJ_T0059098.1 MGP_LPJ_G0026821.1 mouse_genomes_project 2 170633724 170641738 + MGP_LPJ_P0059098 Cd40 protein_coding nonsense_mediated_decay MGP_LPJ_T0059099.1 MGP_LPJ_G0026821.1 mouse_genomes_project 2 170633724 170654117 + MGP_LPJ_P0059099 Cd40 protein_coding protein_coding MGP_LPJ_T0059100.1 MGP_LPJ_G0026821.1 mouse_genomes_project 2 170633733 170652050 + MGP_LPJ_P0059100 Cd40 protein_coding protein_coding MGP_LPJ_T0059101.1 MGP_LPJ_G0026821.1 mouse_genomes_project 2 170633777 170651141 + MGP_LPJ_P0059101 Cd40 protein_coding protein_coding MGP_LPJ_T0059102.1 MGP_LPJ_G0026821.1 mouse_genomes_project 2 170633778 170641795 + MGP_LPJ_P0059102 Cd40 protein_coding protein_coding MGP_LPJ_T0059103.1 MGP_LPJ_G0026821.1 mouse_genomes_project 2 170633801 170651396 + MGP_LPJ_P0059103 Cd40 protein_coding nonsense_mediated_decay MGP_LPJ_T0059104.1 MGP_LPJ_G0026821.1 mouse_genomes_project 2 170641690 170645689 + Cd40 protein_coding retained_intron MGP_LPJ_T0007408.1 MGP_LPJ_G0006077.1 mouse_genomes_project 2 172124055 172136959 + 5031425F14Rik lincRNA lincRNA MGP_LPJ_T0010414.1 MGP_LPJ_G0008532.1 mouse_genomes_project 2 28101364 28101435 + Mir6997 miRNA miRNA MGP_LPJ_T0013682.1 MGP_LPJ_G0011773.1 mouse_genomes_project 2 114179607 114180578 + processed_pseudogene processed_pseudogene MGP_LPJ_T0059770.1 MGP_LPJ_G0026962.1 mouse_genomes_project 2 188224946 188251323 + MGP_LPJ_P0059770 Prpf6 protein_coding protein_coding MGP_LPJ_T0059774.1 MGP_LPJ_G0026962.1 mouse_genomes_project 2 188234398 188294690 + MGP_LPJ_P0059774 Prpf6 protein_coding protein_coding MGP_LPJ_T0059775.1 MGP_LPJ_G0026962.1 mouse_genomes_project 2 188234401 188294699 + MGP_LPJ_P0059775 Prpf6 protein_coding protein_coding MGP_LPJ_T0059776.1 MGP_LPJ_G0026962.1 mouse_genomes_project 2 188234455 188279074 + Prpf6 protein_coding retained_intron MGP_LPJ_T0059518.1 MGP_LPJ_G0026918.1 mouse_genomes_project 2 186591670 186596694 - MGP_LPJ_P0059518 Hrh3 protein_coding protein_coding MGP_LPJ_T0059519.1 MGP_LPJ_G0026918.1 mouse_genomes_project 2 186591856 186596357 - MGP_LPJ_P0059519 Hrh3 protein_coding protein_coding MGP_LPJ_T0059520.1 MGP_LPJ_G0026918.1 mouse_genomes_project 2 186592083 186596357 - MGP_LPJ_P0059520 Hrh3 protein_coding protein_coding MGP_LPJ_T0059521.1 MGP_LPJ_G0026918.1 mouse_genomes_project 2 186592083 186596357 - MGP_LPJ_P0059521 Hrh3 protein_coding protein_coding MGP_LPJ_T0059522.1 MGP_LPJ_G0026918.1 mouse_genomes_project 2 186592484 186596380 - MGP_LPJ_P0059522 Hrh3 protein_coding nonsense_mediated_decay MGP_LPJ_T0059523.1 MGP_LPJ_G0026918.1 mouse_genomes_project 2 186592701 186596357 - MGP_LPJ_P0059523 Hrh3 protein_coding protein_coding MGP_LPJ_T0059524.1 MGP_LPJ_G0026918.1 mouse_genomes_project 2 186592701 186596357 - MGP_LPJ_P0059524 Hrh3 protein_coding protein_coding MGP_LPJ_T0059525.1 MGP_LPJ_G0026918.1 mouse_genomes_project 2 186593189 186595541 - Hrh3 protein_coding retained_intron MGP_LPJ_T0013412.1 MGP_LPJ_G0011503.1 mouse_genomes_project 2 16180679 16180996 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004207.1 MGP_LPJ_G0003714.1 mouse_genomes_project 2 186592118 186593708 + Gm17180 antisense antisense MGP_LPJ_T0098232.1 MGP_LPJ_G0036513.1 mouse_genomes_project 2 95092245 95092348 - Gm23380 rRNA rRNA MGP_LPJ_T0052752.1 MGP_LPJ_G0025336.1 mouse_genomes_project 2 21989051 21995450 - MGP_LPJ_P0052752 protein_coding protein_coding MGP_LPJ_T0059560.1 MGP_LPJ_G0026928.1 mouse_genomes_project 2 187117900 187122231 + MGP_LPJ_P0059560 Mrgbp protein_coding protein_coding MGP_LPJ_T0059561.1 MGP_LPJ_G0026928.1 mouse_genomes_project 2 187119308 187122884 + MGP_LPJ_P0059561 Mrgbp protein_coding protein_coding MGP_LPJ_T0059562.1 MGP_LPJ_G0026928.1 mouse_genomes_project 2 187119319 187122901 + Mrgbp protein_coding retained_intron MGP_LPJ_T0059563.1 MGP_LPJ_G0026928.1 mouse_genomes_project 2 187119322 187122901 + Mrgbp protein_coding retained_intron MGP_LPJ_T0059564.1 MGP_LPJ_G0026928.1 mouse_genomes_project 2 187119328 187122901 + Mrgbp protein_coding retained_intron MGP_LPJ_T0059565.1 MGP_LPJ_G0026928.1 mouse_genomes_project 2 187119354 187122901 + Mrgbp protein_coding retained_intron MGP_LPJ_T0054659.1 MGP_LPJ_G0025673.1 mouse_genomes_project 2 54763394 54936454 + MGP_LPJ_P0054659 Kcnj3 protein_coding protein_coding MGP_LPJ_T0054660.1 MGP_LPJ_G0025673.1 mouse_genomes_project 2 54764574 54933833 + MGP_LPJ_P0054660 Kcnj3 protein_coding protein_coding MGP_LPJ_T0054661.1 MGP_LPJ_G0025673.1 mouse_genomes_project 2 54764583 54936448 + MGP_LPJ_P0054661 Kcnj3 protein_coding protein_coding MGP_LPJ_T0007271.1 MGP_LPJ_G0005966.1 mouse_genomes_project 2 93640952 93695876 - lincRNA lincRNA MGP_LPJ_T0054139.1 MGP_LPJ_G0025565.1 mouse_genomes_project 2 31874475 31887605 - MGP_LPJ_P0054139 Zbtb43 protein_coding protein_coding MGP_LPJ_T0054140.1 MGP_LPJ_G0025565.1 mouse_genomes_project 2 31874475 31893845 - MGP_LPJ_P0054140 Zbtb43 protein_coding protein_coding MGP_LPJ_T0054141.1 MGP_LPJ_G0025565.1 mouse_genomes_project 2 31877710 31893818 - MGP_LPJ_P0054141 Zbtb43 protein_coding protein_coding MGP_LPJ_T0054142.1 MGP_LPJ_G0025565.1 mouse_genomes_project 2 31878807 31890395 - MGP_LPJ_P0054142 Zbtb43 protein_coding protein_coding MGP_LPJ_T0054143.1 MGP_LPJ_G0025565.1 mouse_genomes_project 2 31879076 31893872 - MGP_LPJ_P0054143 Zbtb43 protein_coding protein_coding MGP_LPJ_T0053823.1 MGP_LPJ_G0025517.1 mouse_genomes_project 2 29820330 29866241 + MGP_LPJ_P0053823 Fubp3 protein_coding protein_coding MGP_LPJ_T0053824.1 MGP_LPJ_G0025517.1 mouse_genomes_project 2 29820470 29842935 + MGP_LPJ_P0053824 Fubp3 protein_coding protein_coding MGP_LPJ_T0053825.1 MGP_LPJ_G0025517.1 mouse_genomes_project 2 29820471 29832581 + Fubp3 protein_coding retained_intron MGP_LPJ_T0053826.1 MGP_LPJ_G0025517.1 mouse_genomes_project 2 29820493 29846226 + MGP_LPJ_P0053826 Fubp3 protein_coding protein_coding MGP_LPJ_T0053827.1 MGP_LPJ_G0025517.1 mouse_genomes_project 2 29820496 29866234 + MGP_LPJ_P0053827 Fubp3 protein_coding protein_coding MGP_LPJ_T0053828.1 MGP_LPJ_G0025517.1 mouse_genomes_project 2 29820506 29846212 + MGP_LPJ_P0053828 Fubp3 protein_coding nonsense_mediated_decay MGP_LPJ_T0053829.1 MGP_LPJ_G0025517.1 mouse_genomes_project 2 29850934 29861822 + MGP_LPJ_P0053829 Fubp3 protein_coding nonsense_mediated_decay MGP_LPJ_T0053830.1 MGP_LPJ_G0025517.1 mouse_genomes_project 2 29853481 29864647 + MGP_LPJ_P0053830 Fubp3 protein_coding protein_coding MGP_LPJ_T0053831.1 MGP_LPJ_G0025517.1 mouse_genomes_project 2 29861245 29865431 + MGP_LPJ_P0053831 Fubp3 protein_coding protein_coding MGP_LPJ_T0053832.1 MGP_LPJ_G0025517.1 mouse_genomes_project 2 29863475 29866233 + MGP_LPJ_P0053832 Fubp3 protein_coding protein_coding MGP_LPJ_T0053833.1 MGP_LPJ_G0025517.1 mouse_genomes_project 2 29863893 29866235 + Fubp3 protein_coding retained_intron MGP_LPJ_T0013782.1 MGP_LPJ_G0011873.1 mouse_genomes_project 2 157174300 157174783 + processed_pseudogene processed_pseudogene MGP_LPJ_T0058008.1 MGP_LPJ_G0026553.1 mouse_genomes_project 2 153286142 153292953 + MGP_LPJ_P0058008 Cst8 protein_coding protein_coding MGP_LPJ_T0058009.1 MGP_LPJ_G0026553.1 mouse_genomes_project 2 153286191 153292953 + MGP_LPJ_P0058009 Cst8 protein_coding protein_coding MGP_LPJ_T0058010.1 MGP_LPJ_G0026553.1 mouse_genomes_project 2 153286260 153292953 + Cst8 protein_coding processed_transcript MGP_LPJ_T0052162.1 MGP_LPJ_G0025233.1 mouse_genomes_project 2 253515 299927 + MGP_LPJ_P0052162 Nmt2 protein_coding protein_coding MGP_LPJ_T0052163.1 MGP_LPJ_G0025233.1 mouse_genomes_project 2 253539 279213 + Nmt2 protein_coding processed_transcript MGP_LPJ_T0052164.1 MGP_LPJ_G0025233.1 mouse_genomes_project 2 253555 302074 + MGP_LPJ_P0052164 Nmt2 protein_coding protein_coding MGP_LPJ_T0054317.1 MGP_LPJ_G0025592.1 mouse_genomes_project 2 34719118 34741329 - MGP_LPJ_P0054317 Rbm18 protein_coding protein_coding MGP_LPJ_T0054318.1 MGP_LPJ_G0025592.1 mouse_genomes_project 2 34720639 34741336 - MGP_LPJ_P0054318 Rbm18 protein_coding nonsense_mediated_decay MGP_LPJ_T0054319.1 MGP_LPJ_G0025592.1 mouse_genomes_project 2 34720814 34741375 - MGP_LPJ_P0054319 Rbm18 protein_coding nonsense_mediated_decay MGP_LPJ_T0054320.1 MGP_LPJ_G0025592.1 mouse_genomes_project 2 34730955 34741371 - Rbm18 protein_coding retained_intron MGP_LPJ_T0054775.1 MGP_LPJ_G0025694.1 mouse_genomes_project 2 60044338 60119223 - MGP_LPJ_P0054775 Itgb6 protein_coding protein_coding MGP_LPJ_T0054776.1 MGP_LPJ_G0025694.1 mouse_genomes_project 2 60046208 60169793 - MGP_LPJ_P0054776 Itgb6 protein_coding protein_coding MGP_LPJ_T0054777.1 MGP_LPJ_G0025694.1 mouse_genomes_project 2 60050222 60169793 - MGP_LPJ_P0054777 Itgb6 protein_coding protein_coding MGP_LPJ_T0054778.1 MGP_LPJ_G0025694.1 mouse_genomes_project 2 60051116 60119238 - MGP_LPJ_P0054778 Itgb6 protein_coding protein_coding MGP_LPJ_T0054779.1 MGP_LPJ_G0025694.1 mouse_genomes_project 2 60079935 60119205 - Itgb6 protein_coding processed_transcript MGP_LPJ_T0054780.1 MGP_LPJ_G0025694.1 mouse_genomes_project 2 60098624 60119266 - Itgb6 protein_coding processed_transcript MGP_LPJ_T0054781.1 MGP_LPJ_G0025694.1 mouse_genomes_project 2 60114771 60119215 - Itgb6 protein_coding processed_transcript MGP_LPJ_T0054782.1 MGP_LPJ_G0025694.1 mouse_genomes_project 2 60120154 60152266 - Itgb6 protein_coding processed_transcript MGP_LPJ_T0054783.1 MGP_LPJ_G0025694.1 mouse_genomes_project 2 60140119 60152243 - Itgb6 protein_coding processed_transcript MGP_LPJ_T0004158.1 MGP_LPJ_G0003679.1 mouse_genomes_project 2 162637002 162638206 - Gm14286 antisense antisense MGP_LPJ_T0013744.1 MGP_LPJ_G0011835.1 mouse_genomes_project 2 145243869 145244655 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010485.1 MGP_LPJ_G0008603.1 mouse_genomes_project 2 150236192 150236380 + Gm25026 miRNA miRNA MGP_LPJ_T0003957.1 MGP_LPJ_G0003534.1 mouse_genomes_project 2 29881854 29888991 - Gm13425 antisense antisense MGP_LPJ_T0010496.1 MGP_LPJ_G0008614.1 mouse_genomes_project 2 168508742 168508808 + Mir7003 miRNA miRNA MGP_LPJ_T0057292.1 MGP_LPJ_G0026382.1 mouse_genomes_project 2 130193834 130271952 - MGP_LPJ_P0057292 Usp50 protein_coding nonsense_mediated_decay MGP_LPJ_T0057293.1 MGP_LPJ_G0026382.1 mouse_genomes_project 2 130248649 130258130 - Usp50 protein_coding processed_transcript MGP_LPJ_T0057294.1 MGP_LPJ_G0026382.1 mouse_genomes_project 2 130249020 130271958 - MGP_LPJ_P0057294 Usp50 protein_coding protein_coding MGP_LPJ_T0057295.1 MGP_LPJ_G0026382.1 mouse_genomes_project 2 130264237 130271951 - MGP_LPJ_P0057295 Usp50 protein_coding protein_coding MGP_LPJ_T0057296.1 MGP_LPJ_G0026382.1 mouse_genomes_project 2 130266172 130271972 - Usp50 protein_coding retained_intron MGP_LPJ_T0004043.1 MGP_LPJ_G0003598.1 mouse_genomes_project 2 86269142 86276450 + antisense antisense MGP_LPJ_T0004044.1 MGP_LPJ_G0003598.1 mouse_genomes_project 2 86273707 86328189 + antisense antisense MGP_LPJ_T0004045.1 MGP_LPJ_G0003598.1 mouse_genomes_project 2 86273707 86336895 + antisense antisense MGP_LPJ_T0004046.1 MGP_LPJ_G0003598.1 mouse_genomes_project 2 86273707 86338069 + antisense antisense MGP_LPJ_T0054339.1 MGP_LPJ_G0025604.1 mouse_genomes_project 2 35366368 35369560 + MGP_LPJ_P0054339 Olfr348 protein_coding protein_coding MGP_LPJ_T0054340.1 MGP_LPJ_G0025604.1 mouse_genomes_project 2 35368618 35369560 + MGP_LPJ_P0054340 Olfr348 protein_coding protein_coding MGP_LPJ_T0055682.1 MGP_LPJ_G0025957.1 mouse_genomes_project 2 88766687 88784205 - MGP_LPJ_P0055682 protein_coding protein_coding MGP_LPJ_T0013799.1 MGP_LPJ_G0011890.1 mouse_genomes_project 2 161833368 161833960 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010460.1 MGP_LPJ_G0008578.1 mouse_genomes_project 2 96287060 96287141 - Gm44461 miRNA miRNA MGP_LPJ_T0056915.1 MGP_LPJ_G0026305.1 mouse_genomes_project 2 123700363 123734649 + MGP_LPJ_P0056915 Snap23 protein_coding protein_coding MGP_LPJ_T0056916.1 MGP_LPJ_G0026305.1 mouse_genomes_project 2 123700383 123734649 + MGP_LPJ_P0056916 Snap23 protein_coding protein_coding MGP_LPJ_T0056917.1 MGP_LPJ_G0026305.1 mouse_genomes_project 2 123700389 123734649 + MGP_LPJ_P0056917 Snap23 protein_coding protein_coding MGP_LPJ_T0056918.1 MGP_LPJ_G0026305.1 mouse_genomes_project 2 123700413 123730160 + MGP_LPJ_P0056918 Snap23 protein_coding nonsense_mediated_decay MGP_LPJ_T0056919.1 MGP_LPJ_G0026305.1 mouse_genomes_project 2 123700415 123718567 + Snap23 protein_coding retained_intron MGP_LPJ_T0056920.1 MGP_LPJ_G0026305.1 mouse_genomes_project 2 123700415 123719889 + MGP_LPJ_P0056920 Snap23 protein_coding protein_coding MGP_LPJ_T0056921.1 MGP_LPJ_G0026305.1 mouse_genomes_project 2 123700430 123730073 + MGP_LPJ_P0056921 Snap23 protein_coding protein_coding MGP_LPJ_T0056922.1 MGP_LPJ_G0026305.1 mouse_genomes_project 2 123719862 123728792 + Snap23 protein_coding retained_intron MGP_LPJ_T0056923.1 MGP_LPJ_G0026305.1 mouse_genomes_project 2 123723906 123730155 + Snap23 protein_coding processed_transcript MGP_LPJ_T0056526.1 MGP_LPJ_G0026213.1 mouse_genomes_project 2 114647227 114648166 - MGP_LPJ_P0056526 protein_coding protein_coding MGP_LPJ_T0010458.1 MGP_LPJ_G0008576.1 mouse_genomes_project 2 95974359 95974424 + Mir129b miRNA miRNA MGP_LPJ_T0007309.1 MGP_LPJ_G0005997.1 mouse_genomes_project 2 118180882 118196047 - 4930528P14Rik lincRNA lincRNA MGP_LPJ_T0058462.1 MGP_LPJ_G0026679.1 mouse_genomes_project 2 160734994 160739295 + MGP_LPJ_P0058462 Procr protein_coding protein_coding MGP_LPJ_T0058463.1 MGP_LPJ_G0026679.1 mouse_genomes_project 2 160735000 160738153 + MGP_LPJ_P0058463 Procr protein_coding protein_coding MGP_LPJ_T0058464.1 MGP_LPJ_G0026679.1 mouse_genomes_project 2 160735027 160737620 + Procr protein_coding retained_intron MGP_LPJ_T0058465.1 MGP_LPJ_G0026679.1 mouse_genomes_project 2 160735220 160739292 + Procr protein_coding processed_transcript MGP_LPJ_T0059489.1 MGP_LPJ_G0026911.1 mouse_genomes_project 2 184830060 184837723 + MGP_LPJ_P0059489 Fam217b protein_coding protein_coding MGP_LPJ_T0059490.1 MGP_LPJ_G0026911.1 mouse_genomes_project 2 184830118 184835608 + Fam217b protein_coding processed_transcript MGP_LPJ_T0010483.1 MGP_LPJ_G0008601.1 mouse_genomes_project 2 137453453 137453540 + Mir3090 miRNA miRNA MGP_LPJ_T0013721.1 MGP_LPJ_G0011812.1 mouse_genomes_project 2 134725508 134726443 + processed_pseudogene processed_pseudogene MGP_LPJ_T0056502.1 MGP_LPJ_G0026190.1 mouse_genomes_project 2 113729366 113770057 - MGP_LPJ_P0056502 4930430A15Rik protein_coding protein_coding MGP_LPJ_T0056503.1 MGP_LPJ_G0026190.1 mouse_genomes_project 2 113757333 113796003 - MGP_LPJ_P0056503 4930430A15Rik protein_coding protein_coding MGP_LPJ_T0058985.1 MGP_LPJ_G0026789.1 mouse_genomes_project 2 169998190 170001592 - MGP_LPJ_P0058985 Trp53tg5 protein_coding protein_coding MGP_LPJ_T0059719.1 MGP_LPJ_G0026956.1 mouse_genomes_project 2 188000905 188077207 - MGP_LPJ_P0059719 Zbtb46 protein_coding protein_coding MGP_LPJ_T0059720.1 MGP_LPJ_G0026956.1 mouse_genomes_project 2 188004029 188037764 - MGP_LPJ_P0059720 Zbtb46 protein_coding protein_coding MGP_LPJ_T0059721.1 MGP_LPJ_G0026956.1 mouse_genomes_project 2 188023676 188077207 - MGP_LPJ_P0059721 Zbtb46 protein_coding protein_coding MGP_LPJ_T0059722.1 MGP_LPJ_G0026956.1 mouse_genomes_project 2 188034929 188077207 - Zbtb46 protein_coding retained_intron MGP_LPJ_T0059723.1 MGP_LPJ_G0026956.1 mouse_genomes_project 2 188037603 188077160 - MGP_LPJ_P0059723 Zbtb46 protein_coding protein_coding MGP_LPJ_T0052909.1 MGP_LPJ_G0025362.1 mouse_genomes_project 2 23055671 23066234 - MGP_LPJ_P0052909 Ndor1 protein_coding protein_coding MGP_LPJ_T0052910.1 MGP_LPJ_G0025362.1 mouse_genomes_project 2 23055713 23066237 - MGP_LPJ_P0052910 Ndor1 protein_coding nonsense_mediated_decay MGP_LPJ_T0052911.1 MGP_LPJ_G0025362.1 mouse_genomes_project 2 23056420 23058837 - Ndor1 protein_coding processed_transcript MGP_LPJ_T0052912.1 MGP_LPJ_G0025362.1 mouse_genomes_project 2 23058079 23066260 - MGP_LPJ_P0052912 Ndor1 protein_coding protein_coding MGP_LPJ_T0052913.1 MGP_LPJ_G0025362.1 mouse_genomes_project 2 23058278 23066237 - MGP_LPJ_P0052913 Ndor1 protein_coding nonsense_mediated_decay MGP_LPJ_T0052914.1 MGP_LPJ_G0025362.1 mouse_genomes_project 2 23058437 23059322 - Ndor1 protein_coding retained_intron MGP_LPJ_T0052915.1 MGP_LPJ_G0025362.1 mouse_genomes_project 2 23060322 23066197 - MGP_LPJ_P0052915 Ndor1 protein_coding protein_coding MGP_LPJ_T0052916.1 MGP_LPJ_G0025362.1 mouse_genomes_project 2 23060350 23061193 - Ndor1 protein_coding retained_intron MGP_LPJ_T0052917.1 MGP_LPJ_G0025362.1 mouse_genomes_project 2 23060974 23066267 - MGP_LPJ_P0052917 Ndor1 protein_coding protein_coding MGP_LPJ_T0052918.1 MGP_LPJ_G0025362.1 mouse_genomes_project 2 23061025 23066219 - Ndor1 protein_coding processed_transcript MGP_LPJ_T0052919.1 MGP_LPJ_G0025362.1 mouse_genomes_project 2 23062338 23066112 - Ndor1 protein_coding retained_intron MGP_LPJ_T0052920.1 MGP_LPJ_G0025362.1 mouse_genomes_project 2 23062598 23066873 - MGP_LPJ_P0052920 Ndor1 protein_coding nonsense_mediated_decay MGP_LPJ_T0055705.1 MGP_LPJ_G0025978.1 mouse_genomes_project 2 89147107 89148073 + MGP_LPJ_P0055705 Olfr1161 protein_coding protein_coding MGP_LPJ_T0056325.1 MGP_LPJ_G0026147.1 mouse_genomes_project 2 106094319 106118915 + MGP_LPJ_P0056325 Lmo2 protein_coding protein_coding MGP_LPJ_T0056326.1 MGP_LPJ_G0026147.1 mouse_genomes_project 2 106094328 106119743 + MGP_LPJ_P0056326 Lmo2 protein_coding protein_coding MGP_LPJ_T0056328.1 MGP_LPJ_G0026147.1 mouse_genomes_project 2 106107057 106118957 + MGP_LPJ_P0056328 Lmo2 protein_coding protein_coding MGP_LPJ_T0056329.1 MGP_LPJ_G0026147.1 mouse_genomes_project 2 106107751 106119720 + MGP_LPJ_P0056329 Lmo2 protein_coding protein_coding MGP_LPJ_T0056330.1 MGP_LPJ_G0026147.1 mouse_genomes_project 2 106107763 106113887 + MGP_LPJ_P0056330 Lmo2 protein_coding protein_coding MGP_LPJ_T0056331.1 MGP_LPJ_G0026147.1 mouse_genomes_project 2 106107845 106119739 + MGP_LPJ_P0056331 Lmo2 protein_coding protein_coding MGP_LPJ_T0056332.1 MGP_LPJ_G0026147.1 mouse_genomes_project 2 106107866 106119704 + MGP_LPJ_P0056332 Lmo2 protein_coding protein_coding MGP_LPJ_T0056333.1 MGP_LPJ_G0026147.1 mouse_genomes_project 2 106108801 106118781 + Lmo2 protein_coding processed_transcript MGP_LPJ_T0007145.1 MGP_LPJ_G0005865.1 mouse_genomes_project 2 4813726 4890924 - Gm13211 lincRNA lincRNA MGP_LPJ_T0099318.1 MGP_LPJ_G0037581.1 mouse_genomes_project 2 22829312 22829416 - Gm24875 snRNA snRNA MGP_LPJ_T0055451.1 MGP_LPJ_G0025828.1 mouse_genomes_project 2 84808756 84906912 - MGP_LPJ_P0055451 Calcrl protein_coding protein_coding MGP_LPJ_T0055452.1 MGP_LPJ_G0025828.1 mouse_genomes_project 2 84808789 84855186 - MGP_LPJ_P0055452 Calcrl protein_coding protein_coding MGP_LPJ_T0055453.1 MGP_LPJ_G0025828.1 mouse_genomes_project 2 84855122 84906767 - Calcrl protein_coding processed_transcript MGP_LPJ_T0057927.1 MGP_LPJ_G0026531.1 mouse_genomes_project 2 150137729 150178496 + MGP_LPJ_P0057927 Rin2 protein_coding protein_coding MGP_LPJ_T0057928.1 MGP_LPJ_G0026531.1 mouse_genomes_project 2 150139279 150245519 + MGP_LPJ_P0057928 Rin2 protein_coding protein_coding MGP_LPJ_T0057929.1 MGP_LPJ_G0026531.1 mouse_genomes_project 2 150139415 150245519 + MGP_LPJ_P0057929 Rin2 protein_coding protein_coding MGP_LPJ_T0057930.1 MGP_LPJ_G0026531.1 mouse_genomes_project 2 150139461 150178898 + MGP_LPJ_P0057930 Rin2 protein_coding nonsense_mediated_decay MGP_LPJ_T0057931.1 MGP_LPJ_G0026531.1 mouse_genomes_project 2 150178343 150202780 + Rin2 protein_coding processed_transcript MGP_LPJ_T0057932.1 MGP_LPJ_G0026531.1 mouse_genomes_project 2 150178482 150203049 + Rin2 protein_coding processed_transcript MGP_LPJ_T0057933.1 MGP_LPJ_G0026531.1 mouse_genomes_project 2 150220562 150236881 + Rin2 protein_coding processed_transcript MGP_LPJ_T0053852.1 MGP_LPJ_G0025522.1 mouse_genomes_project 2 30067414 30103767 - MGP_LPJ_P0053852 Fibcd1 protein_coding protein_coding MGP_LPJ_T0003926.1 MGP_LPJ_G0003513.1 mouse_genomes_project 2 18991326 19030586 - Gm13327 antisense antisense MGP_LPJ_T0007335.1 MGP_LPJ_G0006016.1 mouse_genomes_project 2 129995987 130032767 - Gm26697 lincRNA lincRNA MGP_LPJ_T0055592.1 MGP_LPJ_G0025877.1 mouse_genomes_project 2 86606490 86607423 - MGP_LPJ_P0055592 Olfr1019 protein_coding protein_coding MGP_LPJ_T0100633.1 MGP_LPJ_G0038896.1 mouse_genomes_project 2 162820797 162820931 - Gm25407 snoRNA snoRNA MGP_LPJ_T0004081.1 MGP_LPJ_G0003619.1 mouse_genomes_project 2 119780527 119811624 - Gm13990 antisense antisense MGP_LPJ_T0102024.1 MGP_LPJ_G0040061.1 mouse_genomes_project 2 86126493 86127414 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013676.1 MGP_LPJ_G0011767.1 mouse_genomes_project 2 111202563 111203554 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098026.1 MGP_LPJ_G0036307.1 mouse_genomes_project 2 93500676 93501077 - pseudogene pseudogene MGP_LPJ_T0056533.1 MGP_LPJ_G0026220.1 mouse_genomes_project 2 114963314 114971758 + MGP_LPJ_P0056533 Lpcat4 protein_coding protein_coding MGP_LPJ_T0056534.1 MGP_LPJ_G0026220.1 mouse_genomes_project 2 114965329 114967886 + Lpcat4 protein_coding processed_transcript MGP_LPJ_T0056535.1 MGP_LPJ_G0026220.1 mouse_genomes_project 2 114965800 114966590 + Lpcat4 protein_coding processed_transcript MGP_LPJ_T0056536.1 MGP_LPJ_G0026220.1 mouse_genomes_project 2 114968410 114970802 + Lpcat4 protein_coding processed_transcript MGP_LPJ_T0017806.1 MGP_LPJ_G0015381.1 mouse_genomes_project 2 131754731 132002169 - Gm14005 processed_transcript processed_transcript MGP_LPJ_T0017807.1 MGP_LPJ_G0015381.1 mouse_genomes_project 2 131862655 132002351 - Gm14005 processed_transcript processed_transcript MGP_LPJ_T0017808.1 MGP_LPJ_G0015381.1 mouse_genomes_project 2 131880444 132002377 - Gm14005 processed_transcript processed_transcript MGP_LPJ_T0017809.1 MGP_LPJ_G0015381.1 mouse_genomes_project 2 131880620 132002199 - Gm14005 processed_transcript processed_transcript MGP_LPJ_T0017810.1 MGP_LPJ_G0015381.1 mouse_genomes_project 2 131911520 132002269 - Gm14005 processed_transcript processed_transcript MGP_LPJ_T0017811.1 MGP_LPJ_G0015381.1 mouse_genomes_project 2 131941713 132002215 - Gm14005 processed_transcript processed_transcript MGP_LPJ_T0017812.1 MGP_LPJ_G0015381.1 mouse_genomes_project 2 131941714 132001920 - Gm14005 processed_transcript processed_transcript MGP_LPJ_T0007227.1 MGP_LPJ_G0005929.1 mouse_genomes_project 2 65792253 65844714 + Gm28638 lincRNA lincRNA MGP_LPJ_T0010352.1 MGP_LPJ_G0008470.1 mouse_genomes_project 2 7725200 7725284 + Mir466m miRNA miRNA MGP_LPJ_T0058332.1 MGP_LPJ_G0026651.1 mouse_genomes_project 2 159232967 159268038 - MGP_LPJ_P0058332 Snta1 protein_coding protein_coding MGP_LPJ_T0058333.1 MGP_LPJ_G0026651.1 mouse_genomes_project 2 159232967 159268020 - MGP_LPJ_P0058333 Snta1 protein_coding protein_coding MGP_LPJ_T0058334.1 MGP_LPJ_G0026651.1 mouse_genomes_project 2 159257377 159267919 - Snta1 protein_coding processed_transcript MGP_LPJ_T0059211.1 MGP_LPJ_G0026839.1 mouse_genomes_project 2 172665807 172717310 - MGP_LPJ_P0059211 Stau1 protein_coding protein_coding MGP_LPJ_T0059212.1 MGP_LPJ_G0026839.1 mouse_genomes_project 2 172666404 172673641 - Stau1 protein_coding retained_intron MGP_LPJ_T0059213.1 MGP_LPJ_G0026839.1 mouse_genomes_project 2 172666404 172717297 - MGP_LPJ_P0059213 Stau1 protein_coding protein_coding MGP_LPJ_T0059214.1 MGP_LPJ_G0026839.1 mouse_genomes_project 2 172666404 172717135 - MGP_LPJ_P0059214 Stau1 protein_coding protein_coding MGP_LPJ_T0059215.1 MGP_LPJ_G0026839.1 mouse_genomes_project 2 172666530 172717331 - MGP_LPJ_P0059215 Stau1 protein_coding protein_coding MGP_LPJ_T0059216.1 MGP_LPJ_G0026839.1 mouse_genomes_project 2 172667503 172669489 - Stau1 protein_coding retained_intron MGP_LPJ_T0059217.1 MGP_LPJ_G0026839.1 mouse_genomes_project 2 172667549 172682928 - MGP_LPJ_P0059217 Stau1 protein_coding nonsense_mediated_decay MGP_LPJ_T0059218.1 MGP_LPJ_G0026839.1 mouse_genomes_project 2 172667951 172669214 - Stau1 protein_coding retained_intron MGP_LPJ_T0059219.1 MGP_LPJ_G0026839.1 mouse_genomes_project 2 172670561 172678574 - Stau1 protein_coding retained_intron MGP_LPJ_T0059220.1 MGP_LPJ_G0026839.1 mouse_genomes_project 2 172671165 172681653 - Stau1 protein_coding retained_intron MGP_LPJ_T0059221.1 MGP_LPJ_G0026839.1 mouse_genomes_project 2 172681718 172696014 - Stau1 protein_coding processed_transcript MGP_LPJ_T0057082.1 MGP_LPJ_G0026330.1 mouse_genomes_project 2 124599885 124604520 + MGP_LPJ_P0057082 Serf2 protein_coding protein_coding MGP_LPJ_T0057083.1 MGP_LPJ_G0026330.1 mouse_genomes_project 2 124600058 124604105 + Serf2 protein_coding retained_intron MGP_LPJ_T0057084.1 MGP_LPJ_G0026330.1 mouse_genomes_project 2 124600068 124602569 + MGP_LPJ_P0057084 Serf2 protein_coding protein_coding MGP_LPJ_T0057085.1 MGP_LPJ_G0026330.1 mouse_genomes_project 2 124600073 124602333 + MGP_LPJ_P0057085 Serf2 protein_coding protein_coding MGP_LPJ_T0057086.1 MGP_LPJ_G0026330.1 mouse_genomes_project 2 124600102 124609443 + MGP_LPJ_P0057086 Serf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0057087.1 MGP_LPJ_G0026330.1 mouse_genomes_project 2 124600102 124609441 + MGP_LPJ_P0057087 Serf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0010492.1 MGP_LPJ_G0008610.1 mouse_genomes_project 2 163394787 163394849 - Mir7685 miRNA miRNA MGP_LPJ_T0010393.1 MGP_LPJ_G0008511.1 mouse_genomes_project 2 7790512 7790637 + Mir669h miRNA miRNA MGP_LPJ_T0013491.1 MGP_LPJ_G0011582.1 mouse_genomes_project 2 48430306 48431081 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055095.1 MGP_LPJ_G0025753.1 mouse_genomes_project 2 71222078 71328889 - MGP_LPJ_P0055095 Slc25a12 protein_coding protein_coding MGP_LPJ_T0055096.1 MGP_LPJ_G0025753.1 mouse_genomes_project 2 71225705 71328673 - MGP_LPJ_P0055096 Slc25a12 protein_coding nonsense_mediated_decay MGP_LPJ_T0055097.1 MGP_LPJ_G0025753.1 mouse_genomes_project 2 71226092 71245671 - Slc25a12 protein_coding processed_transcript MGP_LPJ_T0055098.1 MGP_LPJ_G0025753.1 mouse_genomes_project 2 71230614 71233843 - Slc25a12 protein_coding retained_intron MGP_LPJ_T0055099.1 MGP_LPJ_G0025753.1 mouse_genomes_project 2 71267216 71284744 - Slc25a12 protein_coding processed_transcript MGP_LPJ_T0055100.1 MGP_LPJ_G0025753.1 mouse_genomes_project 2 71285643 71301797 - Slc25a12 protein_coding processed_transcript MGP_LPJ_T0055101.1 MGP_LPJ_G0025753.1 mouse_genomes_project 2 71301654 71305593 - Slc25a12 protein_coding processed_transcript MGP_LPJ_T0100585.1 MGP_LPJ_G0038848.1 mouse_genomes_project 2 52964248 52964357 - Gm23315 snoRNA snoRNA MGP_LPJ_T0004050.1 MGP_LPJ_G0003602.1 mouse_genomes_project 2 90235979 90244610 - Gm13763 antisense antisense MGP_LPJ_T0017724.1 MGP_LPJ_G0015337.1 mouse_genomes_project 2 56552187 56559443 + 4930555B11Rik processed_transcript processed_transcript MGP_LPJ_T0054321.1 MGP_LPJ_G0025593.1 mouse_genomes_project 2 34741148 34803197 + MGP_LPJ_P0054321 Mrrf protein_coding protein_coding MGP_LPJ_T0054322.1 MGP_LPJ_G0025593.1 mouse_genomes_project 2 34741157 34743576 + Mrrf protein_coding retained_intron MGP_LPJ_T0054323.1 MGP_LPJ_G0025593.1 mouse_genomes_project 2 34741393 34754274 + MGP_LPJ_P0054323 Mrrf protein_coding nonsense_mediated_decay MGP_LPJ_T0054324.1 MGP_LPJ_G0025593.1 mouse_genomes_project 2 34753457 34766014 + Mrrf protein_coding processed_transcript MGP_LPJ_T0059558.1 MGP_LPJ_G0026927.1 mouse_genomes_project 2 187024363 187075160 + MGP_LPJ_P0059558 Ntsr1 protein_coding protein_coding MGP_LPJ_T0059559.1 MGP_LPJ_G0026927.1 mouse_genomes_project 2 187024614 187074399 + MGP_LPJ_P0059559 Ntsr1 protein_coding protein_coding MGP_LPJ_T0053766.1 MGP_LPJ_G0025509.1 mouse_genomes_project 2 29164429 29171736 - MGP_LPJ_P0053766 Tor1a protein_coding protein_coding MGP_LPJ_T0053767.1 MGP_LPJ_G0025509.1 mouse_genomes_project 2 29164482 29171675 - Tor1a protein_coding retained_intron MGP_LPJ_T0053768.1 MGP_LPJ_G0025509.1 mouse_genomes_project 2 29164814 29167651 - Tor1a protein_coding retained_intron MGP_LPJ_T0053769.1 MGP_LPJ_G0025509.1 mouse_genomes_project 2 29164855 29167678 - Tor1a protein_coding retained_intron MGP_LPJ_T0053770.1 MGP_LPJ_G0025509.1 mouse_genomes_project 2 29170713 29171691 - Tor1a protein_coding retained_intron MGP_LPJ_T0055727.1 MGP_LPJ_G0025998.1 mouse_genomes_project 2 89862896 89863817 + MGP_LPJ_P0055727 Olfr1189 protein_coding protein_coding MGP_LPJ_T0102055.1 MGP_LPJ_G0040092.1 mouse_genomes_project 2 91458704 91459634 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013610.1 MGP_LPJ_G0011701.1 mouse_genomes_project 2 88307255 88307655 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099343.1 MGP_LPJ_G0037606.1 mouse_genomes_project 2 104982899 104983006 + Gm23731 snRNA snRNA MGP_LPJ_T0013764.1 MGP_LPJ_G0011855.1 mouse_genomes_project 2 151689950 151690432 - processed_pseudogene processed_pseudogene MGP_LPJ_T0056220.1 MGP_LPJ_G0026129.1 mouse_genomes_project 2 103668614 103679860 - MGP_LPJ_P0056220 Rag1 protein_coding protein_coding MGP_LPJ_T0007166.1 MGP_LPJ_G0005881.1 mouse_genomes_project 2 22301429 22324250 - Gm13417 lincRNA lincRNA MGP_LPJ_T0056552.1 MGP_LPJ_G0026227.1 mouse_genomes_project 2 115192074 115215090 + MGP_LPJ_P0056552 Emc7 protein_coding protein_coding MGP_LPJ_T0011531.1 MGP_LPJ_G0009649.1 mouse_genomes_project 2 151658305 151658629 - Gm22261 misc_RNA misc_RNA MGP_LPJ_T0058664.1 MGP_LPJ_G0026707.1 mouse_genomes_project 2 161910830 161921198 + MGP_LPJ_P0058664 1110008F13Rik protein_coding protein_coding MGP_LPJ_T0058665.1 MGP_LPJ_G0026707.1 mouse_genomes_project 2 161910841 161921033 + 1110008F13Rik protein_coding processed_transcript MGP_LPJ_T0058666.1 MGP_LPJ_G0026707.1 mouse_genomes_project 2 161910847 161914618 + 1110008F13Rik protein_coding retained_intron MGP_LPJ_T0058668.1 MGP_LPJ_G0026707.1 mouse_genomes_project 2 161920176 161921031 + 1110008F13Rik protein_coding processed_transcript MGP_LPJ_T0056517.1 MGP_LPJ_G0026204.1 mouse_genomes_project 2 114215506 114216445 - MGP_LPJ_P0056517 protein_coding protein_coding MGP_LPJ_T0058076.1 MGP_LPJ_G0026575.1 mouse_genomes_project 2 156128874 156164378 + MGP_LPJ_P0058076 Nsfl1c protein_coding protein_coding MGP_LPJ_T0058077.1 MGP_LPJ_G0026575.1 mouse_genomes_project 2 156128881 156159460 + Nsfl1c protein_coding retained_intron MGP_LPJ_T0058078.1 MGP_LPJ_G0026575.1 mouse_genomes_project 2 156128982 156153592 + Nsfl1c protein_coding retained_intron MGP_LPJ_T0058079.1 MGP_LPJ_G0026575.1 mouse_genomes_project 2 156128985 156164373 + MGP_LPJ_P0058079 Nsfl1c protein_coding protein_coding MGP_LPJ_T0058080.1 MGP_LPJ_G0026575.1 mouse_genomes_project 2 156128996 156164482 + MGP_LPJ_P0058080 Nsfl1c protein_coding protein_coding MGP_LPJ_T0058081.1 MGP_LPJ_G0026575.1 mouse_genomes_project 2 156129000 156164374 + MGP_LPJ_P0058081 Nsfl1c protein_coding unknown_likely_coding MGP_LPJ_T0058082.1 MGP_LPJ_G0026575.1 mouse_genomes_project 2 156129003 156155778 + Nsfl1c protein_coding retained_intron MGP_LPJ_T0058083.1 MGP_LPJ_G0026575.1 mouse_genomes_project 2 156154681 156162730 + Nsfl1c protein_coding processed_transcript MGP_LPJ_T0058084.1 MGP_LPJ_G0026575.1 mouse_genomes_project 2 156155334 156164057 + Nsfl1c protein_coding retained_intron MGP_LPJ_T0058085.1 MGP_LPJ_G0026575.1 mouse_genomes_project 2 156156091 156162760 + Nsfl1c protein_coding retained_intron MGP_LPJ_T0058086.1 MGP_LPJ_G0026575.1 mouse_genomes_project 2 156162167 156164330 + Nsfl1c protein_coding retained_intron MGP_LPJ_T0054350.1 MGP_LPJ_G0025614.1 mouse_genomes_project 2 35582579 35583506 + MGP_LPJ_P0054350 Olfr357 protein_coding protein_coding MGP_LPJ_T0059077.1 MGP_LPJ_G0026818.1 mouse_genomes_project 2 170513967 170522059 + MGP_LPJ_P0059077 Mmp9 protein_coding protein_coding MGP_LPJ_T0059078.1 MGP_LPJ_G0026818.1 mouse_genomes_project 2 170521383 170529015 + MGP_LPJ_P0059078 Mmp9 protein_coding protein_coding MGP_LPJ_T0059079.1 MGP_LPJ_G0026818.1 mouse_genomes_project 2 170523860 170524427 + Mmp9 protein_coding retained_intron MGP_LPJ_T0059080.1 MGP_LPJ_G0026818.1 mouse_genomes_project 2 170527550 170529015 + Mmp9 protein_coding processed_transcript MGP_LPJ_T0013528.1 MGP_LPJ_G0011619.1 mouse_genomes_project 2 59525249 59525558 - processed_pseudogene processed_pseudogene MGP_LPJ_T0056512.1 MGP_LPJ_G0026199.1 mouse_genomes_project 2 113907152 113908310 + MGP_LPJ_P0056512 protein_coding protein_coding MGP_LPJ_T0056284.1 MGP_LPJ_G0026142.1 mouse_genomes_project 2 105528545 105568848 + MGP_LPJ_P0056284 Elf5 protein_coding protein_coding MGP_LPJ_T0056285.1 MGP_LPJ_G0026142.1 mouse_genomes_project 2 105528570 105562030 + Elf5 protein_coding retained_intron MGP_LPJ_T0056286.1 MGP_LPJ_G0026142.1 mouse_genomes_project 2 105540921 105568851 + MGP_LPJ_P0056286 Elf5 protein_coding protein_coding MGP_LPJ_T0056287.1 MGP_LPJ_G0026142.1 mouse_genomes_project 2 105540985 105567703 + MGP_LPJ_P0056287 Elf5 protein_coding protein_coding MGP_LPJ_T0056288.1 MGP_LPJ_G0026142.1 mouse_genomes_project 2 105541686 105566893 + MGP_LPJ_P0056288 Elf5 protein_coding protein_coding MGP_LPJ_T0056289.1 MGP_LPJ_G0026142.1 mouse_genomes_project 2 105563622 105566877 + Elf5 protein_coding processed_transcript MGP_LPJ_T0056290.1 MGP_LPJ_G0026142.1 mouse_genomes_project 2 105566599 105567685 + Elf5 protein_coding processed_transcript MGP_LPJ_T0058043.1 MGP_LPJ_G0026567.1 mouse_genomes_project 2 155337853 155360761 + MGP_LPJ_P0058043 Entpd6 protein_coding protein_coding MGP_LPJ_T0058044.1 MGP_LPJ_G0026567.1 mouse_genomes_project 2 155337892 155352085 + Entpd6 protein_coding retained_intron MGP_LPJ_T0058045.1 MGP_LPJ_G0026567.1 mouse_genomes_project 2 155337903 155352898 + Entpd6 protein_coding processed_transcript MGP_LPJ_T0058046.1 MGP_LPJ_G0026567.1 mouse_genomes_project 2 155337982 155342036 + Entpd6 protein_coding processed_transcript MGP_LPJ_T0003950.1 MGP_LPJ_G0003528.1 mouse_genomes_project 2 27406500 27453738 - Gm13402 antisense antisense MGP_LPJ_T0007182.1 MGP_LPJ_G0005892.1 mouse_genomes_project 2 28798311 28862065 + 9330198N18Rik lincRNA lincRNA MGP_LPJ_T0057136.1 MGP_LPJ_G0026340.1 mouse_genomes_project 2 125251045 125280003 + MGP_LPJ_P0057136 Eif3j2 protein_coding protein_coding MGP_LPJ_T0007404.1 MGP_LPJ_G0006074.1 mouse_genomes_project 2 171867794 171869192 - Gm11467 lincRNA lincRNA MGP_LPJ_T0057627.1 MGP_LPJ_G0026463.1 mouse_genomes_project 2 134917312 134922198 - MGP_LPJ_P0057627 Cenpb protein_coding protein_coding MGP_LPJ_T0013759.1 MGP_LPJ_G0011850.1 mouse_genomes_project 2 150041158 150041468 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055660.1 MGP_LPJ_G0025943.1 mouse_genomes_project 2 88411849 88412794 + MGP_LPJ_P0055660 Olfr1120 protein_coding protein_coding MGP_LPJ_T0058948.1 MGP_LPJ_G0026772.1 mouse_genomes_project 2 169656520 169664007 - MGP_LPJ_P0058948 Kcns1 protein_coding protein_coding MGP_LPJ_T0013770.1 MGP_LPJ_G0011861.1 mouse_genomes_project 2 152877502 152877737 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013692.1 MGP_LPJ_G0011783.1 mouse_genomes_project 2 117876419 117877313 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010437.1 MGP_LPJ_G0008555.1 mouse_genomes_project 2 61263831 61263915 - Gm22403 miRNA miRNA MGP_LPJ_T0056735.1 MGP_LPJ_G0026271.1 mouse_genomes_project 2 122223236 122226312 + MGP_LPJ_P0056735 Gm14137 protein_coding protein_coding MGP_LPJ_T0053531.1 MGP_LPJ_G0025478.1 mouse_genomes_project 2 27984326 27996260 + MGP_LPJ_P0053531 Odf2 protein_coding protein_coding MGP_LPJ_T0053532.1 MGP_LPJ_G0025478.1 mouse_genomes_project 2 27984339 27987682 + Odf2 protein_coding retained_intron MGP_LPJ_T0053533.1 MGP_LPJ_G0025478.1 mouse_genomes_project 2 27984825 28020945 + MGP_LPJ_P0053533 Odf2 protein_coding protein_coding MGP_LPJ_T0053534.1 MGP_LPJ_G0025478.1 mouse_genomes_project 2 27984890 28020945 + MGP_LPJ_P0053534 Odf2 protein_coding protein_coding MGP_LPJ_T0053535.1 MGP_LPJ_G0025478.1 mouse_genomes_project 2 27984900 28029502 + MGP_LPJ_P0053535 Odf2 protein_coding protein_coding MGP_LPJ_T0053536.1 MGP_LPJ_G0025478.1 mouse_genomes_project 2 27984900 28030152 + MGP_LPJ_P0053536 Odf2 protein_coding protein_coding MGP_LPJ_T0053537.1 MGP_LPJ_G0025478.1 mouse_genomes_project 2 27984903 28029502 + MGP_LPJ_P0053537 Odf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0053538.1 MGP_LPJ_G0025478.1 mouse_genomes_project 2 27984916 27997429 + Odf2 protein_coding processed_transcript MGP_LPJ_T0053539.1 MGP_LPJ_G0025478.1 mouse_genomes_project 2 27984920 27997399 + MGP_LPJ_P0053539 Odf2 protein_coding protein_coding MGP_LPJ_T0053540.1 MGP_LPJ_G0025478.1 mouse_genomes_project 2 27984922 28030152 + MGP_LPJ_P0053540 Odf2 protein_coding protein_coding MGP_LPJ_T0053541.1 MGP_LPJ_G0025478.1 mouse_genomes_project 2 27984923 28020945 + MGP_LPJ_P0053541 Odf2 protein_coding protein_coding MGP_LPJ_T0053542.1 MGP_LPJ_G0025478.1 mouse_genomes_project 2 27984930 27996646 + Odf2 protein_coding retained_intron MGP_LPJ_T0053543.1 MGP_LPJ_G0025478.1 mouse_genomes_project 2 27984939 27999228 + MGP_LPJ_P0053543 Odf2 protein_coding protein_coding MGP_LPJ_T0053544.1 MGP_LPJ_G0025478.1 mouse_genomes_project 2 27985000 28030153 + MGP_LPJ_P0053544 Odf2 protein_coding protein_coding MGP_LPJ_T0053545.1 MGP_LPJ_G0025478.1 mouse_genomes_project 2 27985168 28020945 + MGP_LPJ_P0053545 Odf2 protein_coding protein_coding MGP_LPJ_T0053546.1 MGP_LPJ_G0025478.1 mouse_genomes_project 2 27985188 27986096 + Odf2 protein_coding processed_transcript MGP_LPJ_T0053547.1 MGP_LPJ_G0025478.1 mouse_genomes_project 2 27985248 28020945 + MGP_LPJ_P0053547 Odf2 protein_coding protein_coding MGP_LPJ_T0053548.1 MGP_LPJ_G0025478.1 mouse_genomes_project 2 27985261 28029502 + MGP_LPJ_P0053548 Odf2 protein_coding protein_coding MGP_LPJ_T0053549.1 MGP_LPJ_G0025478.1 mouse_genomes_project 2 27985645 28020942 + MGP_LPJ_P0053549 Odf2 protein_coding protein_coding MGP_LPJ_T0053550.1 MGP_LPJ_G0025478.1 mouse_genomes_project 2 27987101 27996274 + Odf2 protein_coding processed_transcript MGP_LPJ_T0053551.1 MGP_LPJ_G0025478.1 mouse_genomes_project 2 27998692 28013279 + Odf2 protein_coding processed_transcript MGP_LPJ_T0053552.1 MGP_LPJ_G0025478.1 mouse_genomes_project 2 27998723 28013720 + Odf2 protein_coding processed_transcript MGP_LPJ_T0053553.1 MGP_LPJ_G0025478.1 mouse_genomes_project 2 28011033 28013683 + Odf2 protein_coding retained_intron MGP_LPJ_T0053554.1 MGP_LPJ_G0025478.1 mouse_genomes_project 2 28012799 28017601 + Odf2 protein_coding retained_intron MGP_LPJ_T0053555.1 MGP_LPJ_G0025478.1 mouse_genomes_project 2 28023877 28025151 + Odf2 protein_coding retained_intron MGP_LPJ_T0010439.1 MGP_LPJ_G0008557.1 mouse_genomes_project 2 67412225 67412285 + Mir7224 miRNA miRNA MGP_LPJ_T0053449.1 MGP_LPJ_G0025464.1 mouse_genomes_project 2 26867660 26874762 + Ddx31 protein_coding processed_transcript MGP_LPJ_T0053450.1 MGP_LPJ_G0025464.1 mouse_genomes_project 2 26867713 26933981 + MGP_LPJ_P0053450 Ddx31 protein_coding protein_coding MGP_LPJ_T0053451.1 MGP_LPJ_G0025464.1 mouse_genomes_project 2 26872152 26883466 + Ddx31 protein_coding processed_transcript MGP_LPJ_T0053452.1 MGP_LPJ_G0025464.1 mouse_genomes_project 2 26884375 26887311 + Ddx31 protein_coding processed_transcript MGP_LPJ_T0013633.1 MGP_LPJ_G0011724.1 mouse_genomes_project 2 94537811 94538234 - processed_pseudogene processed_pseudogene MGP_LPJ_T0057391.1 MGP_LPJ_G0026404.1 mouse_genomes_project 2 131243759 131270590 - MGP_LPJ_P0057391 Mall protein_coding protein_coding MGP_LPJ_T0059291.1 MGP_LPJ_G0026857.1 mouse_genomes_project 2 174015082 174065216 - MGP_LPJ_P0059291 protein_coding nonsense_mediated_decay MGP_LPJ_T0054662.1 MGP_LPJ_G0025674.1 mouse_genomes_project 2 56473901 56494231 - MGP_LPJ_P0054662 Nr4a2 protein_coding nonsense_mediated_decay MGP_LPJ_T0054663.1 MGP_LPJ_G0025674.1 mouse_genomes_project 2 56475227 56481734 - MGP_LPJ_P0054663 Nr4a2 protein_coding protein_coding MGP_LPJ_T0054664.1 MGP_LPJ_G0025674.1 mouse_genomes_project 2 56479074 56482111 - Nr4a2 protein_coding processed_transcript MGP_LPJ_T0054665.1 MGP_LPJ_G0025674.1 mouse_genomes_project 2 56480061 56481446 - Nr4a2 protein_coding processed_transcript MGP_LPJ_T0055859.1 MGP_LPJ_G0026073.1 mouse_genomes_project 2 92381970 92386636 + MGP_LPJ_P0055859 C1qtnf4 protein_coding protein_coding MGP_LPJ_T0053633.1 MGP_LPJ_G0025490.1 mouse_genomes_project 2 28364064 28390145 + MGP_LPJ_P0053633 protein_coding protein_coding MGP_LPJ_T0053634.1 MGP_LPJ_G0025490.1 mouse_genomes_project 2 28364071 28390150 + MGP_LPJ_P0053634 protein_coding protein_coding MGP_LPJ_T0058579.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161143421 161178603 - MGP_LPJ_P0058579 Rbm39 protein_coding protein_coding MGP_LPJ_T0058580.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161143422 161171492 - MGP_LPJ_P0058580 Rbm39 protein_coding unknown_likely_coding MGP_LPJ_T0058581.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161143425 161177945 - MGP_LPJ_P0058581 Rbm39 protein_coding protein_coding MGP_LPJ_T0058582.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161143428 161178514 - MGP_LPJ_P0058582 Rbm39 protein_coding nonsense_mediated_decay MGP_LPJ_T0058583.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161143428 161178532 - MGP_LPJ_P0058583 Rbm39 protein_coding protein_coding MGP_LPJ_T0058584.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161144119 161178541 - MGP_LPJ_P0058584 Rbm39 protein_coding nonsense_mediated_decay MGP_LPJ_T0058585.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161144119 161178549 - MGP_LPJ_P0058585 Rbm39 protein_coding nonsense_mediated_decay MGP_LPJ_T0058586.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161145408 161161416 - MGP_LPJ_P0058586 Rbm39 protein_coding protein_coding MGP_LPJ_T0058587.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161158033 161178507 - MGP_LPJ_P0058587 Rbm39 protein_coding protein_coding MGP_LPJ_T0058588.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161158035 161161705 - Rbm39 protein_coding retained_intron MGP_LPJ_T0058589.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161159017 161166523 - Rbm39 protein_coding processed_transcript MGP_LPJ_T0058590.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161160481 161165434 - Rbm39 protein_coding retained_intron MGP_LPJ_T0058591.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161161298 161178524 - MGP_LPJ_P0058591 Rbm39 protein_coding protein_coding MGP_LPJ_T0058592.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161161412 161171304 - Rbm39 protein_coding processed_transcript MGP_LPJ_T0058593.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161164823 161176096 - Rbm39 protein_coding retained_intron MGP_LPJ_T0058594.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161167118 161175745 - Rbm39 protein_coding processed_transcript MGP_LPJ_T0058595.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161171175 161178526 - MGP_LPJ_P0058595 Rbm39 protein_coding nonsense_mediated_decay MGP_LPJ_T0058596.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161171274 161178512 - MGP_LPJ_P0058596 Rbm39 protein_coding nonsense_mediated_decay MGP_LPJ_T0058597.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161171296 161176266 - Rbm39 protein_coding retained_intron MGP_LPJ_T0058598.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161173043 161178277 - MGP_LPJ_P0058598 Rbm39 protein_coding nonsense_mediated_decay MGP_LPJ_T0058599.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161173047 161178521 - MGP_LPJ_P0058599 Rbm39 protein_coding nonsense_mediated_decay MGP_LPJ_T0058600.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161173132 161178603 - MGP_LPJ_P0058600 Rbm39 protein_coding protein_coding MGP_LPJ_T0058601.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161175522 161178561 - Rbm39 protein_coding retained_intron MGP_LPJ_T0058602.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161175722 161178514 - MGP_LPJ_P0058602 Rbm39 protein_coding nonsense_mediated_decay MGP_LPJ_T0058603.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161176923 161178577 - Rbm39 protein_coding retained_intron MGP_LPJ_T0058604.1 MGP_LPJ_G0026697.1 mouse_genomes_project 2 161176925 161178510 - Rbm39 protein_coding retained_intron MGP_LPJ_T0058699.1 MGP_LPJ_G0026714.1 mouse_genomes_project 2 162221061 162291262 - MGP_LPJ_P0058699 Rbl1 protein_coding protein_coding MGP_LPJ_T0058700.1 MGP_LPJ_G0026714.1 mouse_genomes_project 2 162245046 162291284 - Rbl1 protein_coding retained_intron MGP_LPJ_T0058701.1 MGP_LPJ_G0026714.1 mouse_genomes_project 2 162254270 162291276 - Rbl1 protein_coding retained_intron MGP_LPJ_T0058702.1 MGP_LPJ_G0026714.1 mouse_genomes_project 2 162275370 162279491 - Rbl1 protein_coding retained_intron MGP_LPJ_T0102015.1 MGP_LPJ_G0040052.1 mouse_genomes_project 2 35427433 35428015 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013596.1 MGP_LPJ_G0011687.1 mouse_genomes_project 2 83925706 83926190 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004039.1 MGP_LPJ_G0003595.1 mouse_genomes_project 2 84195285 84195745 - Gm13686 antisense antisense MGP_LPJ_T0055814.1 MGP_LPJ_G0026063.1 mouse_genomes_project 2 91514089 91515004 - MGP_LPJ_P0055814 Olfr1270 protein_coding protein_coding MGP_LPJ_T0010487.1 MGP_LPJ_G0008605.1 mouse_genomes_project 2 156645135 156645224 - Mir1953 miRNA miRNA MGP_LPJ_T0055236.1 MGP_LPJ_G0025778.1 mouse_genomes_project 2 74853352 74856003 + MGP_LPJ_P0055236 Hoxd12 protein_coding protein_coding MGP_LPJ_T0053051.1 MGP_LPJ_G0025384.1 mouse_genomes_project 2 23349616 23383803 - MGP_LPJ_P0053051 Traf2 protein_coding protein_coding MGP_LPJ_T0053052.1 MGP_LPJ_G0025384.1 mouse_genomes_project 2 23350500 23375984 - Traf2 protein_coding retained_intron MGP_LPJ_T0053053.1 MGP_LPJ_G0025384.1 mouse_genomes_project 2 23350500 23383773 - MGP_LPJ_P0053053 Traf2 protein_coding protein_coding MGP_LPJ_T0058140.1 MGP_LPJ_G0026590.1 mouse_genomes_project 2 156990585 157010884 + MGP_LPJ_P0058140 Tbc1d20 protein_coding protein_coding MGP_LPJ_T0058141.1 MGP_LPJ_G0026590.1 mouse_genomes_project 2 156990608 157004975 + MGP_LPJ_P0058141 Tbc1d20 protein_coding protein_coding MGP_LPJ_T0058142.1 MGP_LPJ_G0026590.1 mouse_genomes_project 2 156990629 157010884 + Tbc1d20 protein_coding retained_intron MGP_LPJ_T0058143.1 MGP_LPJ_G0026590.1 mouse_genomes_project 2 156990937 157005321 + MGP_LPJ_P0058143 Tbc1d20 protein_coding protein_coding MGP_LPJ_T0058144.1 MGP_LPJ_G0026590.1 mouse_genomes_project 2 157005091 157007696 + Tbc1d20 protein_coding retained_intron MGP_LPJ_T0007414.1 MGP_LPJ_G0006081.1 mouse_genomes_project 2 173564686 173569789 + Gm14321 lincRNA lincRNA MGP_LPJ_T0007415.1 MGP_LPJ_G0006081.1 mouse_genomes_project 2 173564755 173569346 + Gm14321 lincRNA lincRNA MGP_LPJ_T0055393.1 MGP_LPJ_G0025813.1 mouse_genomes_project 2 80241882 80557495 - MGP_LPJ_P0055393 Pde1a protein_coding protein_coding MGP_LPJ_T0055394.1 MGP_LPJ_G0025813.1 mouse_genomes_project 2 80262041 80315376 - MGP_LPJ_P0055394 Pde1a protein_coding protein_coding MGP_LPJ_T0055395.1 MGP_LPJ_G0025813.1 mouse_genomes_project 2 80262041 80315376 - MGP_LPJ_P0055395 Pde1a protein_coding protein_coding MGP_LPJ_T0055396.1 MGP_LPJ_G0025813.1 mouse_genomes_project 2 80268042 80335367 - MGP_LPJ_P0055396 Pde1a protein_coding protein_coding MGP_LPJ_T0055397.1 MGP_LPJ_G0025813.1 mouse_genomes_project 2 80312945 80451587 - Pde1a protein_coding processed_transcript MGP_LPJ_T0055398.1 MGP_LPJ_G0025813.1 mouse_genomes_project 2 80321061 80557745 - Pde1a protein_coding processed_transcript MGP_LPJ_T0059106.1 MGP_LPJ_G0026823.1 mouse_genomes_project 2 170700107 170830862 - MGP_LPJ_P0059106 Cdh22 protein_coding protein_coding MGP_LPJ_T0059107.1 MGP_LPJ_G0026823.1 mouse_genomes_project 2 170700927 170773937 - MGP_LPJ_P0059107 Cdh22 protein_coding nonsense_mediated_decay MGP_LPJ_T0056857.1 MGP_LPJ_G0026299.1 mouse_genomes_project 2 123419543 123431937 - Pla2g4f protein_coding retained_intron MGP_LPJ_T0056858.1 MGP_LPJ_G0026299.1 mouse_genomes_project 2 123419552 123434771 - MGP_LPJ_P0056858 Pla2g4f protein_coding protein_coding MGP_LPJ_T0100611.1 MGP_LPJ_G0038874.1 mouse_genomes_project 2 131216303 131216361 + Gm22889 snoRNA snoRNA MGP_LPJ_T0007231.1 MGP_LPJ_G0005933.1 mouse_genomes_project 2 71762634 71775486 + Platr26 lincRNA lincRNA MGP_LPJ_T0100605.1 MGP_LPJ_G0038868.1 mouse_genomes_project 2 110323264 110323396 - Gm23439 snoRNA snoRNA MGP_LPJ_T0007268.1 MGP_LPJ_G0005963.1 mouse_genomes_project 2 86364672 86373748 + Gm27174 lincRNA lincRNA MGP_LPJ_T0059599.1 MGP_LPJ_G0026938.1 mouse_genomes_project 2 187509753 187535876 - MGP_LPJ_P0059599 Nkain4 protein_coding protein_coding MGP_LPJ_T0059600.1 MGP_LPJ_G0026938.1 mouse_genomes_project 2 187509753 187518283 - MGP_LPJ_P0059600 Nkain4 protein_coding protein_coding MGP_LPJ_T0059601.1 MGP_LPJ_G0026938.1 mouse_genomes_project 2 187509753 187535876 - MGP_LPJ_P0059601 Nkain4 protein_coding protein_coding MGP_LPJ_T0059602.1 MGP_LPJ_G0026938.1 mouse_genomes_project 2 187510971 187535797 - MGP_LPJ_P0059602 Nkain4 protein_coding protein_coding MGP_LPJ_T0059603.1 MGP_LPJ_G0026938.1 mouse_genomes_project 2 187512167 187535871 - MGP_LPJ_P0059603 Nkain4 protein_coding protein_coding MGP_LPJ_T0059604.1 MGP_LPJ_G0026938.1 mouse_genomes_project 2 187518369 187535496 - Nkain4 protein_coding processed_transcript MGP_LPJ_T0059605.1 MGP_LPJ_G0026938.1 mouse_genomes_project 2 187518946 187524791 - MGP_LPJ_P0059605 Nkain4 protein_coding protein_coding MGP_LPJ_T0013822.1 MGP_LPJ_G0011913.1 mouse_genomes_project 2 172728921 172730618 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001133.1 MGP_LPJ_G0001057.1 mouse_genomes_project 2 161082606 161084282 - TEC TEC MGP_LPJ_T0004202.1 MGP_LPJ_G0003712.1 mouse_genomes_project 2 180377542 180436165 - Gm10714 antisense antisense MGP_LPJ_T0004203.1 MGP_LPJ_G0003712.1 mouse_genomes_project 2 180378064 180378393 - Gm10714 antisense antisense MGP_LPJ_T0057344.1 MGP_LPJ_G0026392.1 mouse_genomes_project 2 130758428 130773600 + MGP_LPJ_P0057344 Tmem127 protein_coding protein_coding MGP_LPJ_T0057345.1 MGP_LPJ_G0026392.1 mouse_genomes_project 2 130758489 130767696 + MGP_LPJ_P0057345 Tmem127 protein_coding protein_coding MGP_LPJ_T0057346.1 MGP_LPJ_G0026392.1 mouse_genomes_project 2 130758493 130768068 + MGP_LPJ_P0057346 Tmem127 protein_coding protein_coding MGP_LPJ_T0003903.1 MGP_LPJ_G0003493.1 mouse_genomes_project 2 2974475 2979123 + Gm13267 antisense antisense MGP_LPJ_T0003904.1 MGP_LPJ_G0003493.1 mouse_genomes_project 2 2974565 2977897 + Gm13267 antisense antisense MGP_LPJ_T0013424.1 MGP_LPJ_G0011515.1 mouse_genomes_project 2 20584234 20584774 - processed_pseudogene processed_pseudogene MGP_LPJ_T0054357.1 MGP_LPJ_G0025620.1 mouse_genomes_project 2 35731010 35733508 + MGP_LPJ_P0054357 protein_coding protein_coding MGP_LPJ_T0013713.1 MGP_LPJ_G0011804.1 mouse_genomes_project 2 132161638 132161912 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013375.1 MGP_LPJ_G0011466.1 mouse_genomes_project 2 1887782 1888259 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013482.1 MGP_LPJ_G0011573.1 mouse_genomes_project 2 44222552 44222786 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011535.1 MGP_LPJ_G0009653.1 mouse_genomes_project 2 163655680 163655766 + Gm24379 misc_RNA misc_RNA MGP_LPJ_T0013737.1 MGP_LPJ_G0011828.1 mouse_genomes_project 2 140705857 140706327 - processed_pseudogene processed_pseudogene MGP_LPJ_T0057333.1 MGP_LPJ_G0026389.1 mouse_genomes_project 2 130696433 130718285 - MGP_LPJ_P0057333 1810024B03Rik protein_coding protein_coding MGP_LPJ_T0057334.1 MGP_LPJ_G0026389.1 mouse_genomes_project 2 130712652 130718259 - 1810024B03Rik protein_coding processed_transcript MGP_LPJ_T0054832.1 MGP_LPJ_G0025702.1 mouse_genomes_project 2 62020804 62094776 - MGP_LPJ_P0054832 Fap protein_coding protein_coding MGP_LPJ_T0054833.1 MGP_LPJ_G0025702.1 mouse_genomes_project 2 62020974 62094681 - Fap protein_coding processed_transcript MGP_LPJ_T0054834.1 MGP_LPJ_G0025702.1 mouse_genomes_project 2 62020984 62023286 - MGP_LPJ_P0054834 Fap protein_coding nonsense_mediated_decay MGP_LPJ_T0054835.1 MGP_LPJ_G0025702.1 mouse_genomes_project 2 62021045 62094552 - MGP_LPJ_P0054835 Fap protein_coding protein_coding MGP_LPJ_T0054836.1 MGP_LPJ_G0025702.1 mouse_genomes_project 2 62021045 62094552 - MGP_LPJ_P0054836 Fap protein_coding protein_coding MGP_LPJ_T0054837.1 MGP_LPJ_G0025702.1 mouse_genomes_project 2 62021045 62094552 - MGP_LPJ_P0054837 Fap protein_coding protein_coding MGP_LPJ_T0054838.1 MGP_LPJ_G0025702.1 mouse_genomes_project 2 62047016 62084562 - Fap protein_coding retained_intron MGP_LPJ_T0054839.1 MGP_LPJ_G0025702.1 mouse_genomes_project 2 62055450 62094624 - Fap protein_coding retained_intron MGP_LPJ_T0054840.1 MGP_LPJ_G0025702.1 mouse_genomes_project 2 62069196 62094261 - MGP_LPJ_P0054840 Fap protein_coding protein_coding MGP_LPJ_T0054606.1 MGP_LPJ_G0025663.1 mouse_genomes_project 2 51274053 51324322 + MGP_LPJ_P0054606 Rif1 protein_coding protein_coding MGP_LPJ_T0054607.1 MGP_LPJ_G0025663.1 mouse_genomes_project 2 51274058 51324324 + MGP_LPJ_P0054607 Rif1 protein_coding protein_coding MGP_LPJ_T0054608.1 MGP_LPJ_G0025663.1 mouse_genomes_project 2 51274288 51277422 + Rif1 protein_coding processed_transcript MGP_LPJ_T0054609.1 MGP_LPJ_G0025663.1 mouse_genomes_project 2 51274366 51323144 + MGP_LPJ_P0054609 Rif1 protein_coding unknown_likely_coding MGP_LPJ_T0054610.1 MGP_LPJ_G0025663.1 mouse_genomes_project 2 51290772 51309117 + Rif1 protein_coding processed_transcript MGP_LPJ_T0054611.1 MGP_LPJ_G0025663.1 mouse_genomes_project 2 51294392 51299642 + Rif1 protein_coding processed_transcript MGP_LPJ_T0054612.1 MGP_LPJ_G0025663.1 mouse_genomes_project 2 51312322 51323997 + Rif1 protein_coding processed_transcript MGP_LPJ_T0054613.1 MGP_LPJ_G0025663.1 mouse_genomes_project 2 51312799 51324050 + Rif1 protein_coding processed_transcript MGP_LPJ_T0054614.1 MGP_LPJ_G0025663.1 mouse_genomes_project 2 51313471 51324322 + Rif1 protein_coding processed_transcript MGP_LPJ_T0052347.1 MGP_LPJ_G0025264.1 mouse_genomes_project 2 7091682 7094352 + MGP_LPJ_P0052347 4930412O13Rik protein_coding protein_coding MGP_LPJ_T0052348.1 MGP_LPJ_G0025264.1 mouse_genomes_project 2 7093066 7093766 + MGP_LPJ_P0052348 4930412O13Rik protein_coding protein_coding MGP_LPJ_T0052264.1 MGP_LPJ_G0025251.1 mouse_genomes_project 2 2222211 2318414 + MGP_LPJ_P0052264 Ccdc3 protein_coding protein_coding MGP_LPJ_T0055493.1 MGP_LPJ_G0025835.1 mouse_genomes_project 2 85163336 85172906 + MGP_LPJ_P0055493 Med19 protein_coding protein_coding MGP_LPJ_T0055494.1 MGP_LPJ_G0025835.1 mouse_genomes_project 2 85170323 85172190 + Med19 protein_coding processed_transcript MGP_LPJ_T0053309.1 MGP_LPJ_G0025435.1 mouse_genomes_project 2 24872549 24882229 - MGP_LPJ_P0053309 Rexo4 protein_coding protein_coding MGP_LPJ_T0053310.1 MGP_LPJ_G0025435.1 mouse_genomes_project 2 24872761 24882122 - MGP_LPJ_P0053310 Rexo4 protein_coding protein_coding MGP_LPJ_T0053311.1 MGP_LPJ_G0025435.1 mouse_genomes_project 2 24873166 24874485 - Rexo4 protein_coding processed_transcript MGP_LPJ_T0053312.1 MGP_LPJ_G0025435.1 mouse_genomes_project 2 24874498 24882121 - Rexo4 protein_coding processed_transcript MGP_LPJ_T0053313.1 MGP_LPJ_G0025435.1 mouse_genomes_project 2 24876201 24878109 - Rexo4 protein_coding processed_transcript MGP_LPJ_T0053314.1 MGP_LPJ_G0025435.1 mouse_genomes_project 2 24880721 24882167 - Rexo4 protein_coding processed_transcript MGP_LPJ_T0058796.1 MGP_LPJ_G0026736.1 mouse_genomes_project 2 163990234 164054458 + MGP_LPJ_P0058796 Dhx35 protein_coding protein_coding MGP_LPJ_T0058797.1 MGP_LPJ_G0026736.1 mouse_genomes_project 2 163990234 164054458 + MGP_LPJ_P0058797 Dhx35 protein_coding protein_coding MGP_LPJ_T0058798.1 MGP_LPJ_G0026736.1 mouse_genomes_project 2 163990289 164054458 + Dhx35 protein_coding processed_transcript MGP_LPJ_T0058799.1 MGP_LPJ_G0026736.1 mouse_genomes_project 2 163990292 164042793 + Dhx35 protein_coding retained_intron MGP_LPJ_T0058800.1 MGP_LPJ_G0026736.1 mouse_genomes_project 2 163990312 164025585 + MGP_LPJ_P0058800 Dhx35 protein_coding protein_coding MGP_LPJ_T0058801.1 MGP_LPJ_G0026736.1 mouse_genomes_project 2 163990318 164014397 + Dhx35 protein_coding processed_transcript MGP_LPJ_T0058802.1 MGP_LPJ_G0026736.1 mouse_genomes_project 2 163991350 163996942 + Dhx35 protein_coding processed_transcript MGP_LPJ_T0058803.1 MGP_LPJ_G0026736.1 mouse_genomes_project 2 164023411 164030936 + Dhx35 protein_coding processed_transcript MGP_LPJ_T0058804.1 MGP_LPJ_G0026736.1 mouse_genomes_project 2 164046455 164053608 + Dhx35 protein_coding processed_transcript MGP_LPJ_T0055608.1 MGP_LPJ_G0025892.1 mouse_genomes_project 2 86919181 86920123 - MGP_LPJ_P0055608 protein_coding protein_coding MGP_LPJ_T0010450.1 MGP_LPJ_G0008568.1 mouse_genomes_project 2 93526307 93526368 - Mir6999 miRNA miRNA MGP_LPJ_T0013706.1 MGP_LPJ_G0011797.1 mouse_genomes_project 2 125449636 125449982 + processed_pseudogene processed_pseudogene MGP_LPJ_T0052495.1 MGP_LPJ_G0025285.1 mouse_genomes_project 2 10672670 10894493 - MGP_LPJ_P0052495 Cubn protein_coding protein_coding MGP_LPJ_T0052496.1 MGP_LPJ_G0025285.1 mouse_genomes_project 2 10673060 10894493 - MGP_LPJ_P0052496 Cubn protein_coding unknown_likely_coding MGP_LPJ_T0052497.1 MGP_LPJ_G0025285.1 mouse_genomes_project 2 10820261 10856931 - Cubn protein_coding retained_intron MGP_LPJ_T0052498.1 MGP_LPJ_G0025285.1 mouse_genomes_project 2 10857943 10860784 - Cubn protein_coding retained_intron MGP_LPJ_T0001116.1 MGP_LPJ_G0001041.1 mouse_genomes_project 2 68807878 68811651 + TEC TEC MGP_LPJ_T0059388.1 MGP_LPJ_G0026884.1 mouse_genomes_project 2 179154984 179172258 + Spo11 protein_coding retained_intron MGP_LPJ_T0059389.1 MGP_LPJ_G0026884.1 mouse_genomes_project 2 179157097 179172252 + MGP_LPJ_P0059389 Spo11 protein_coding protein_coding MGP_LPJ_T0059390.1 MGP_LPJ_G0026884.1 mouse_genomes_project 2 179157104 179172254 + MGP_LPJ_P0059390 Spo11 protein_coding protein_coding MGP_LPJ_T0059391.1 MGP_LPJ_G0026884.1 mouse_genomes_project 2 179157104 179172263 + MGP_LPJ_P0059391 Spo11 protein_coding protein_coding MGP_LPJ_T0059392.1 MGP_LPJ_G0026884.1 mouse_genomes_project 2 179164545 179170729 + Spo11 protein_coding processed_transcript MGP_LPJ_T0003954.1 MGP_LPJ_G0003531.1 mouse_genomes_project 2 28547434 28549057 + Gm16323 antisense antisense MGP_LPJ_T0102052.1 MGP_LPJ_G0040089.1 mouse_genomes_project 2 89564950 89565886 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0054848.1 MGP_LPJ_G0025705.1 mouse_genomes_project 2 62221151 62739462 - MGP_LPJ_P0054848 Kcnh7 protein_coding protein_coding MGP_LPJ_T0054849.1 MGP_LPJ_G0025705.1 mouse_genomes_project 2 62325491 62739471 - MGP_LPJ_P0054849 Kcnh7 protein_coding protein_coding MGP_LPJ_T0054850.1 MGP_LPJ_G0025705.1 mouse_genomes_project 2 62325575 62739354 - MGP_LPJ_P0054850 Kcnh7 protein_coding protein_coding MGP_LPJ_T0054851.1 MGP_LPJ_G0025705.1 mouse_genomes_project 2 62736652 62739446 - Kcnh7 protein_coding processed_transcript MGP_LPJ_T0013625.1 MGP_LPJ_G0011716.1 mouse_genomes_project 2 92537948 92538293 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010401.1 MGP_LPJ_G0008519.1 mouse_genomes_project 2 22725183 22725309 + Gm22875 miRNA miRNA MGP_LPJ_T0102032.1 MGP_LPJ_G0040069.1 mouse_genomes_project 2 86905156 86906113 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0017797.1 MGP_LPJ_G0015378.1 mouse_genomes_project 2 125901510 125903637 + processed_transcript processed_transcript MGP_LPJ_T0017798.1 MGP_LPJ_G0015378.1 mouse_genomes_project 2 125901531 125915007 + processed_transcript processed_transcript MGP_LPJ_T0059334.1 MGP_LPJ_G0026864.1 mouse_genomes_project 2 174792191 174859535 - MGP_LPJ_P0059334 Zfp64 protein_coding protein_coding MGP_LPJ_T0059335.1 MGP_LPJ_G0026864.1 mouse_genomes_project 2 174809182 174814981 - MGP_LPJ_P0059335 Zfp64 protein_coding protein_coding MGP_LPJ_T0059336.1 MGP_LPJ_G0026864.1 mouse_genomes_project 2 174827966 174859220 - MGP_LPJ_P0059336 Zfp64 protein_coding protein_coding MGP_LPJ_T0059337.1 MGP_LPJ_G0026864.1 mouse_genomes_project 2 174838983 174859237 - MGP_LPJ_P0059337 Zfp64 protein_coding protein_coding MGP_LPJ_T0059338.1 MGP_LPJ_G0026864.1 mouse_genomes_project 2 174854469 174859214 - Zfp64 protein_coding retained_intron MGP_LPJ_T0007234.1 MGP_LPJ_G0005936.1 mouse_genomes_project 2 72006183 72007513 + Gm13746 lincRNA lincRNA MGP_LPJ_T0003925.1 MGP_LPJ_G0003512.1 mouse_genomes_project 2 18597246 18598190 + Gm13375 antisense antisense MGP_LPJ_T0013762.1 MGP_LPJ_G0011853.1 mouse_genomes_project 2 151275425 151276265 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017863.1 MGP_LPJ_G0015407.1 mouse_genomes_project 2 173311874 173375028 + Gm11476 processed_transcript processed_transcript MGP_LPJ_T0013805.1 MGP_LPJ_G0011896.1 mouse_genomes_project 2 163568869 163569158 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055759.1 MGP_LPJ_G0026027.1 mouse_genomes_project 2 90518340 90519273 - MGP_LPJ_P0055759 Olfr1226 protein_coding protein_coding MGP_LPJ_T0017731.1 MGP_LPJ_G0015342.1 mouse_genomes_project 2 69907660 69911155 + Gm13631 processed_transcript processed_transcript MGP_LPJ_T0004181.1 MGP_LPJ_G0003695.1 mouse_genomes_project 2 170480859 170493041 + Zfp335os antisense antisense MGP_LPJ_T0004182.1 MGP_LPJ_G0003695.1 mouse_genomes_project 2 170485622 170492647 + Zfp335os antisense antisense MGP_LPJ_T0052603.1 MGP_LPJ_G0025306.1 mouse_genomes_project 2 16220924 16224728 + MGP_LPJ_P0052603 Commd3 protein_coding protein_coding MGP_LPJ_T0052604.1 MGP_LPJ_G0025306.1 mouse_genomes_project 2 16220963 16224729 + MGP_LPJ_P0052604 Commd3 protein_coding protein_coding MGP_LPJ_T0052605.1 MGP_LPJ_G0025306.1 mouse_genomes_project 2 16220973 16223190 + Commd3 protein_coding processed_transcript MGP_LPJ_T0052606.1 MGP_LPJ_G0025306.1 mouse_genomes_project 2 16220975 16223133 + Commd3 protein_coding processed_transcript MGP_LPJ_T0052607.1 MGP_LPJ_G0025306.1 mouse_genomes_project 2 16220976 16223010 + Commd3 protein_coding processed_transcript MGP_LPJ_T0052608.1 MGP_LPJ_G0025306.1 mouse_genomes_project 2 16221063 16222898 + Commd3 protein_coding processed_transcript MGP_LPJ_T0052609.1 MGP_LPJ_G0025306.1 mouse_genomes_project 2 16222155 16222895 + Commd3 protein_coding processed_transcript MGP_LPJ_T0052610.1 MGP_LPJ_G0025306.1 mouse_genomes_project 2 16222458 16224426 + Commd3 protein_coding processed_transcript MGP_LPJ_T0052611.1 MGP_LPJ_G0025306.1 mouse_genomes_project 2 16222582 16224479 + Commd3 protein_coding processed_transcript MGP_LPJ_T0052612.1 MGP_LPJ_G0025306.1 mouse_genomes_project 2 16222844 16224421 + Commd3 protein_coding processed_transcript MGP_LPJ_T0052613.1 MGP_LPJ_G0025306.1 mouse_genomes_project 2 16222921 16223504 + Commd3 protein_coding processed_transcript MGP_LPJ_T0052614.1 MGP_LPJ_G0025306.1 mouse_genomes_project 2 16223146 16223999 + Commd3 protein_coding processed_transcript MGP_LPJ_T0013631.1 MGP_LPJ_G0011722.1 mouse_genomes_project 2 93936050 93936740 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007390.1 MGP_LPJ_G0006060.1 mouse_genomes_project 2 165170821 165205694 - Gm14223 lincRNA lincRNA MGP_LPJ_T0102068.1 MGP_LPJ_G0040105.1 mouse_genomes_project 2 133006034 133017047 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0059074.1 MGP_LPJ_G0026817.1 mouse_genomes_project 2 170459575 170481263 - MGP_LPJ_P0059074 Zfp335 protein_coding protein_coding MGP_LPJ_T0059075.1 MGP_LPJ_G0026817.1 mouse_genomes_project 2 170459575 170481263 - MGP_LPJ_P0059075 Zfp335 protein_coding nonsense_mediated_decay MGP_LPJ_T0059076.1 MGP_LPJ_G0026817.1 mouse_genomes_project 2 170472012 170477171 - MGP_LPJ_P0059076 Zfp335 protein_coding nonsense_mediated_decay MGP_LPJ_T0099316.1 MGP_LPJ_G0037579.1 mouse_genomes_project 2 17880705 17880812 + Gm23970 snRNA snRNA MGP_LPJ_T0055570.1 MGP_LPJ_G0025864.1 mouse_genomes_project 2 86234870 86239417 - MGP_LPJ_P0055570 Olfr1006 protein_coding protein_coding MGP_LPJ_T0055571.1 MGP_LPJ_G0025864.1 mouse_genomes_project 2 86234870 86235833 - MGP_LPJ_P0055571 Olfr1006 protein_coding protein_coding MGP_LPJ_T0055618.1 MGP_LPJ_G0025902.1 mouse_genomes_project 2 87108369 87109308 + MGP_LPJ_P0055618 Olfr1052 protein_coding protein_coding MGP_LPJ_T0054397.1 MGP_LPJ_G0025630.1 mouse_genomes_project 2 36388050 36410901 + MGP_LPJ_P0054397 Crb2 protein_coding protein_coding MGP_LPJ_T0054398.1 MGP_LPJ_G0025630.1 mouse_genomes_project 2 36402991 36405344 + MGP_LPJ_P0054398 Crb2 protein_coding nonsense_mediated_decay MGP_LPJ_T0054399.1 MGP_LPJ_G0025630.1 mouse_genomes_project 2 36406963 36408414 + Crb2 protein_coding processed_transcript MGP_LPJ_T0056712.1 MGP_LPJ_G0026266.1 mouse_genomes_project 2 122089609 122114508 + MGP_LPJ_P0056712 Casc5 protein_coding protein_coding MGP_LPJ_T0056713.1 MGP_LPJ_G0026266.1 mouse_genomes_project 2 122089609 122151965 + MGP_LPJ_P0056713 Casc5 protein_coding protein_coding MGP_LPJ_T0056714.1 MGP_LPJ_G0026266.1 mouse_genomes_project 2 122089637 122111206 + MGP_LPJ_P0056714 Casc5 protein_coding protein_coding MGP_LPJ_T0056715.1 MGP_LPJ_G0026266.1 mouse_genomes_project 2 122089640 122118155 + MGP_LPJ_P0056715 Casc5 protein_coding protein_coding MGP_LPJ_T0056716.1 MGP_LPJ_G0026266.1 mouse_genomes_project 2 122101280 122153341 + MGP_LPJ_P0056716 Casc5 protein_coding protein_coding MGP_LPJ_T0058680.1 MGP_LPJ_G0026710.1 mouse_genomes_project 2 162060063 162072474 - MGP_LPJ_P0058680 Dsn1 protein_coding protein_coding MGP_LPJ_T0058681.1 MGP_LPJ_G0026710.1 mouse_genomes_project 2 162060075 162072553 - MGP_LPJ_P0058681 Dsn1 protein_coding protein_coding MGP_LPJ_T0058682.1 MGP_LPJ_G0026710.1 mouse_genomes_project 2 162062522 162072429 - MGP_LPJ_P0058682 Dsn1 protein_coding protein_coding MGP_LPJ_T0058683.1 MGP_LPJ_G0026710.1 mouse_genomes_project 2 162067503 162071700 - MGP_LPJ_P0058683 Dsn1 protein_coding protein_coding MGP_LPJ_T0058684.1 MGP_LPJ_G0026710.1 mouse_genomes_project 2 162070718 162071973 - MGP_LPJ_P0058684 Dsn1 protein_coding protein_coding MGP_LPJ_T0058098.1 MGP_LPJ_G0026578.1 mouse_genomes_project 2 156247830 156291134 - MGP_LPJ_P0058098 Snph protein_coding protein_coding MGP_LPJ_T0058099.1 MGP_LPJ_G0026578.1 mouse_genomes_project 2 156247830 156291158 - MGP_LPJ_P0058099 Snph protein_coding protein_coding MGP_LPJ_T0058100.1 MGP_LPJ_G0026578.1 mouse_genomes_project 2 156247845 156291152 - MGP_LPJ_P0058100 Snph protein_coding protein_coding MGP_LPJ_T0058101.1 MGP_LPJ_G0026578.1 mouse_genomes_project 2 156249012 156291178 - MGP_LPJ_P0058101 Snph protein_coding protein_coding MGP_LPJ_T0058102.1 MGP_LPJ_G0026578.1 mouse_genomes_project 2 156254442 156291056 - MGP_LPJ_P0058102 Snph protein_coding protein_coding MGP_LPJ_T0058103.1 MGP_LPJ_G0026578.1 mouse_genomes_project 2 156258103 156291111 - Snph protein_coding retained_intron MGP_LPJ_T0058104.1 MGP_LPJ_G0026578.1 mouse_genomes_project 2 156258266 156291125 - MGP_LPJ_P0058104 Snph protein_coding protein_coding MGP_LPJ_T0058105.1 MGP_LPJ_G0026578.1 mouse_genomes_project 2 156258283 156291146 - MGP_LPJ_P0058105 Snph protein_coding protein_coding MGP_LPJ_T0058106.1 MGP_LPJ_G0026578.1 mouse_genomes_project 2 156258491 156291158 - Snph protein_coding processed_transcript MGP_LPJ_T0058107.1 MGP_LPJ_G0026578.1 mouse_genomes_project 2 156278381 156291152 - Snph protein_coding processed_transcript MGP_LPJ_T0058108.1 MGP_LPJ_G0026578.1 mouse_genomes_project 2 156290317 156291138 - Snph protein_coding retained_intron MGP_LPJ_T0003978.1 MGP_LPJ_G0003552.1 mouse_genomes_project 2 37359638 37367554 + Nr5a1os antisense antisense MGP_LPJ_T0058917.1 MGP_LPJ_G0026763.1 mouse_genomes_project 2 169137603 169205512 + Pkig protein_coding retained_intron MGP_LPJ_T0058918.1 MGP_LPJ_G0026763.1 mouse_genomes_project 2 169137603 169207912 + MGP_LPJ_P0058918 Pkig protein_coding protein_coding MGP_LPJ_T0058919.1 MGP_LPJ_G0026763.1 mouse_genomes_project 2 169137616 169207908 + MGP_LPJ_P0058919 Pkig protein_coding protein_coding MGP_LPJ_T0058920.1 MGP_LPJ_G0026763.1 mouse_genomes_project 2 169137632 169207442 + MGP_LPJ_P0058920 Pkig protein_coding protein_coding MGP_LPJ_T0058921.1 MGP_LPJ_G0026763.1 mouse_genomes_project 2 169137675 169202776 + MGP_LPJ_P0058921 Pkig protein_coding protein_coding MGP_LPJ_T0058922.1 MGP_LPJ_G0026763.1 mouse_genomes_project 2 169137694 169207545 + MGP_LPJ_P0058922 Pkig protein_coding protein_coding MGP_LPJ_T0058923.1 MGP_LPJ_G0026763.1 mouse_genomes_project 2 169137697 169207272 + MGP_LPJ_P0058923 Pkig protein_coding protein_coding MGP_LPJ_T0058924.1 MGP_LPJ_G0026763.1 mouse_genomes_project 2 169140718 169207227 + MGP_LPJ_P0058924 Pkig protein_coding protein_coding MGP_LPJ_T0058925.1 MGP_LPJ_G0026763.1 mouse_genomes_project 2 169175867 169207906 + MGP_LPJ_P0058925 Pkig protein_coding protein_coding MGP_LPJ_T0053721.1 MGP_LPJ_G0025501.1 mouse_genomes_project 2 28611430 28614114 - MGP_LPJ_P0053721 Ier5l protein_coding protein_coding MGP_LPJ_T0059269.1 MGP_LPJ_G0026849.1 mouse_genomes_project 2 173288097 173293983 + MGP_LPJ_P0059269 Snai1 protein_coding protein_coding MGP_LPJ_T0055563.1 MGP_LPJ_G0025857.1 mouse_genomes_project 2 85965655 85966600 - MGP_LPJ_P0055563 Olfr994 protein_coding protein_coding MGP_LPJ_T0052807.1 MGP_LPJ_G0025344.1 mouse_genomes_project 2 22713236 22723516 - MGP_LPJ_P0052807 Arrdc1 protein_coding protein_coding MGP_LPJ_T0052808.1 MGP_LPJ_G0025344.1 mouse_genomes_project 2 22713236 22723605 - MGP_LPJ_P0052808 Arrdc1 protein_coding protein_coding MGP_LPJ_T0052809.1 MGP_LPJ_G0025344.1 mouse_genomes_project 2 22713239 22723498 - Arrdc1 protein_coding retained_intron MGP_LPJ_T0052810.1 MGP_LPJ_G0025344.1 mouse_genomes_project 2 22713873 22723520 - MGP_LPJ_P0052810 Arrdc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0052811.1 MGP_LPJ_G0025344.1 mouse_genomes_project 2 22713939 22723498 - Arrdc1 protein_coding retained_intron MGP_LPJ_T0052812.1 MGP_LPJ_G0025344.1 mouse_genomes_project 2 22714042 22723495 - MGP_LPJ_P0052812 Arrdc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0052813.1 MGP_LPJ_G0025344.1 mouse_genomes_project 2 22714067 22715085 - Arrdc1 protein_coding retained_intron MGP_LPJ_T0052814.1 MGP_LPJ_G0025344.1 mouse_genomes_project 2 22714207 22723527 - MGP_LPJ_P0052814 Arrdc1 protein_coding protein_coding MGP_LPJ_T0052815.1 MGP_LPJ_G0025344.1 mouse_genomes_project 2 22714556 22715788 - Arrdc1 protein_coding retained_intron MGP_LPJ_T0052816.1 MGP_LPJ_G0025344.1 mouse_genomes_project 2 22714796 22723407 - MGP_LPJ_P0052816 Arrdc1 protein_coding protein_coding MGP_LPJ_T0052817.1 MGP_LPJ_G0025344.1 mouse_genomes_project 2 22714879 22716016 - Arrdc1 protein_coding processed_transcript MGP_LPJ_T0052818.1 MGP_LPJ_G0025344.1 mouse_genomes_project 2 22715168 22723541 - Arrdc1 protein_coding retained_intron MGP_LPJ_T0013749.1 MGP_LPJ_G0011840.1 mouse_genomes_project 2 147553840 147553990 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004177.1 MGP_LPJ_G0003693.1 mouse_genomes_project 2 169985745 169988854 - antisense antisense MGP_LPJ_T0059028.1 MGP_LPJ_G0026808.1 mouse_genomes_project 2 170346379 170353007 + MGP_LPJ_P0059028 Snx21 protein_coding protein_coding MGP_LPJ_T0059029.1 MGP_LPJ_G0026808.1 mouse_genomes_project 2 170346547 170354330 + MGP_LPJ_P0059029 Snx21 protein_coding protein_coding MGP_LPJ_T0059030.1 MGP_LPJ_G0026808.1 mouse_genomes_project 2 170346547 170353572 + MGP_LPJ_P0059030 Snx21 protein_coding protein_coding MGP_LPJ_T0059031.1 MGP_LPJ_G0026808.1 mouse_genomes_project 2 170346573 170348169 + MGP_LPJ_P0059031 Snx21 protein_coding protein_coding MGP_LPJ_T0059032.1 MGP_LPJ_G0026808.1 mouse_genomes_project 2 170347330 170353144 + MGP_LPJ_P0059032 Snx21 protein_coding protein_coding MGP_LPJ_T0059033.1 MGP_LPJ_G0026808.1 mouse_genomes_project 2 170350930 170354336 + Snx21 protein_coding retained_intron MGP_LPJ_T0059034.1 MGP_LPJ_G0026808.1 mouse_genomes_project 2 170352171 170354328 + Snx21 protein_coding processed_transcript MGP_LPJ_T0013374.1 MGP_LPJ_G0011465.1 mouse_genomes_project 2 1744045 1744426 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013487.1 MGP_LPJ_G0011578.1 mouse_genomes_project 2 47343872 47344126 + processed_pseudogene processed_pseudogene MGP_LPJ_T0056115.1 MGP_LPJ_G0026111.1 mouse_genomes_project 2 94630506 94718805 - MGP_LPJ_P0056115 Prdm11 protein_coding protein_coding MGP_LPJ_T0056116.1 MGP_LPJ_G0026111.1 mouse_genomes_project 2 94643047 94719378 - MGP_LPJ_P0056116 Prdm11 protein_coding protein_coding MGP_LPJ_T0056117.1 MGP_LPJ_G0026111.1 mouse_genomes_project 2 94654371 94683364 - MGP_LPJ_P0056117 Prdm11 protein_coding protein_coding MGP_LPJ_T0056118.1 MGP_LPJ_G0026111.1 mouse_genomes_project 2 94679062 94682511 - Prdm11 protein_coding processed_transcript MGP_LPJ_T0056119.1 MGP_LPJ_G0026111.1 mouse_genomes_project 2 94681227 94719401 - MGP_LPJ_P0056119 Prdm11 protein_coding protein_coding MGP_LPJ_T0102047.1 MGP_LPJ_G0040084.1 mouse_genomes_project 2 88986891 88987829 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013382.1 MGP_LPJ_G0011473.1 mouse_genomes_project 2 3226684 3229515 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013488.1 MGP_LPJ_G0011579.1 mouse_genomes_project 2 47435827 47436141 + processed_pseudogene processed_pseudogene MGP_LPJ_T0055808.1 MGP_LPJ_G0026058.1 mouse_genomes_project 2 91377471 91380845 + MGP_LPJ_P0055808 Olfr1261 protein_coding protein_coding MGP_LPJ_T0013558.1 MGP_LPJ_G0011649.1 mouse_genomes_project 2 72623044 72623445 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099329.1 MGP_LPJ_G0037592.1 mouse_genomes_project 2 47432009 47432129 - Gm25338 snRNA snRNA MGP_LPJ_T0055698.1 MGP_LPJ_G0025971.1 mouse_genomes_project 2 89039123 89041169 - MGP_LPJ_P0055698 Olfr1154 protein_coding protein_coding MGP_LPJ_T0010457.1 MGP_LPJ_G0008575.1 mouse_genomes_project 2 95974345 95974435 - Mir129-2 miRNA miRNA MGP_LPJ_T0054492.1 MGP_LPJ_G0025647.1 mouse_genomes_project 2 42571870 43224146 + MGP_LPJ_P0054492 Arhgap15 protein_coding protein_coding MGP_LPJ_T0054493.1 MGP_LPJ_G0025647.1 mouse_genomes_project 2 42571880 43216144 + MGP_LPJ_P0054493 Arhgap15 protein_coding nonsense_mediated_decay MGP_LPJ_T0054494.1 MGP_LPJ_G0025647.1 mouse_genomes_project 2 42571915 42726601 + Arhgap15 protein_coding processed_transcript MGP_LPJ_T0054495.1 MGP_LPJ_G0025647.1 mouse_genomes_project 2 42571916 43216148 + MGP_LPJ_P0054495 Arhgap15 protein_coding protein_coding MGP_LPJ_T0054496.1 MGP_LPJ_G0025647.1 mouse_genomes_project 2 42900773 42982302 + Arhgap15 protein_coding processed_transcript MGP_LPJ_T0059472.1 MGP_LPJ_G0026906.1 mouse_genomes_project 2 181050935 181074305 + MGP_LPJ_P0059472 Edn3 protein_coding protein_coding MGP_LPJ_T0059473.1 MGP_LPJ_G0026906.1 mouse_genomes_project 2 181051115 181072243 + MGP_LPJ_P0059473 Edn3 protein_coding protein_coding MGP_LPJ_T0059474.1 MGP_LPJ_G0026906.1 mouse_genomes_project 2 181051368 181072848 + Edn3 protein_coding retained_intron MGP_LPJ_T0059475.1 MGP_LPJ_G0026906.1 mouse_genomes_project 2 181060238 181072803 + Edn3 protein_coding processed_transcript MGP_LPJ_T0001062.1 MGP_LPJ_G0000987.1 mouse_genomes_project 2 8861405 8863508 - TEC TEC MGP_LPJ_T0004029.1 MGP_LPJ_G0003589.1 mouse_genomes_project 2 74875070 74875893 - Gm28793 antisense antisense MGP_LPJ_T0007391.1 MGP_LPJ_G0006061.1 mouse_genomes_project 2 165278307 165306146 + 9130015L21Rik lincRNA lincRNA MGP_LPJ_T0053267.1 MGP_LPJ_G0025426.1 mouse_genomes_project 2 24582537 24586146 - MGP_LPJ_P0053267 Lcn4 protein_coding protein_coding MGP_LPJ_T0056808.1 MGP_LPJ_G0026290.1 mouse_genomes_project 2 123006677 123075976 + MGP_LPJ_P0056808 Mga protein_coding unknown_likely_coding MGP_LPJ_T0056809.1 MGP_LPJ_G0026290.1 mouse_genomes_project 2 123006699 123079972 + MGP_LPJ_P0056809 Mga protein_coding protein_coding MGP_LPJ_T0056810.1 MGP_LPJ_G0026290.1 mouse_genomes_project 2 123006699 123081794 + MGP_LPJ_P0056810 Mga protein_coding protein_coding MGP_LPJ_T0056811.1 MGP_LPJ_G0026290.1 mouse_genomes_project 2 123006699 123081794 + MGP_LPJ_P0056811 Mga protein_coding protein_coding MGP_LPJ_T0056812.1 MGP_LPJ_G0026290.1 mouse_genomes_project 2 123006699 123081794 + MGP_LPJ_P0056812 Mga protein_coding protein_coding MGP_LPJ_T0056813.1 MGP_LPJ_G0026290.1 mouse_genomes_project 2 123006703 123027754 + Mga protein_coding retained_intron MGP_LPJ_T0056814.1 MGP_LPJ_G0026290.1 mouse_genomes_project 2 123006719 123036458 + Mga protein_coding processed_transcript MGP_LPJ_T0056815.1 MGP_LPJ_G0026290.1 mouse_genomes_project 2 123006776 123071767 + MGP_LPJ_P0056815 Mga protein_coding protein_coding MGP_LPJ_T0056816.1 MGP_LPJ_G0026290.1 mouse_genomes_project 2 123031444 123033852 + Mga protein_coding retained_intron MGP_LPJ_T0056817.1 MGP_LPJ_G0026290.1 mouse_genomes_project 2 123044926 123048502 + Mga protein_coding processed_transcript MGP_LPJ_T0056818.1 MGP_LPJ_G0026290.1 mouse_genomes_project 2 123045095 123057593 + Mga protein_coding processed_transcript MGP_LPJ_T0056819.1 MGP_LPJ_G0026290.1 mouse_genomes_project 2 123045190 123052677 + Mga protein_coding processed_transcript MGP_LPJ_T0056820.1 MGP_LPJ_G0026290.1 mouse_genomes_project 2 123052386 123058262 + Mga protein_coding processed_transcript MGP_LPJ_T0056821.1 MGP_LPJ_G0026290.1 mouse_genomes_project 2 123052890 123058055 + Mga protein_coding processed_transcript MGP_LPJ_T0056822.1 MGP_LPJ_G0026290.1 mouse_genomes_project 2 123069281 123076376 + Mga protein_coding processed_transcript MGP_LPJ_T0056823.1 MGP_LPJ_G0026290.1 mouse_genomes_project 2 123071377 123073197 + Mga protein_coding retained_intron MGP_LPJ_T0100632.1 MGP_LPJ_G0038895.1 mouse_genomes_project 2 160633186 160633319 - Gm22334 snoRNA snoRNA MGP_LPJ_T0056780.1 MGP_LPJ_G0026285.1 mouse_genomes_project 2 122764161 122830120 + MGP_LPJ_P0056780 Rtf1 protein_coding protein_coding MGP_LPJ_T0056781.1 MGP_LPJ_G0026285.1 mouse_genomes_project 2 122764190 122784438 + Rtf1 protein_coding processed_transcript MGP_LPJ_T0056782.1 MGP_LPJ_G0026285.1 mouse_genomes_project 2 122804251 122805645 + Rtf1 protein_coding retained_intron MGP_LPJ_T0056783.1 MGP_LPJ_G0026285.1 mouse_genomes_project 2 122821366 122822329 + Rtf1 protein_coding retained_intron MGP_LPJ_T0017779.1 MGP_LPJ_G0015371.1 mouse_genomes_project 2 116791669 116806119 + A530058N18Rik processed_transcript antisense MGP_LPJ_T0017780.1 MGP_LPJ_G0015371.1 mouse_genomes_project 2 116791777 116810357 + A530058N18Rik processed_transcript antisense MGP_LPJ_T0017781.1 MGP_LPJ_G0015371.1 mouse_genomes_project 2 116791778 116809648 + A530058N18Rik processed_transcript antisense MGP_LPJ_T0017782.1 MGP_LPJ_G0015371.1 mouse_genomes_project 2 116791780 116810170 + A530058N18Rik processed_transcript antisense MGP_LPJ_T0017783.1 MGP_LPJ_G0015371.1 mouse_genomes_project 2 116791793 116798741 + A530058N18Rik processed_transcript retained_intron MGP_LPJ_T0017784.1 MGP_LPJ_G0015371.1 mouse_genomes_project 2 116791811 116795581 + A530058N18Rik processed_transcript antisense MGP_LPJ_T0017785.1 MGP_LPJ_G0015371.1 mouse_genomes_project 2 116791812 116809516 + A530058N18Rik processed_transcript antisense MGP_LPJ_T0004049.1 MGP_LPJ_G0003601.1 mouse_genomes_project 2 86447406 86450253 - Gm27222 antisense antisense MGP_LPJ_T0011504.1 MGP_LPJ_G0009622.1 mouse_genomes_project 2 18846240 18846417 - Gm23007 misc_RNA misc_RNA MGP_LPJ_T0011528.1 MGP_LPJ_G0009646.1 mouse_genomes_project 2 134425283 134425652 - Gm24893 misc_RNA misc_RNA MGP_LPJ_T0054352.1 MGP_LPJ_G0025616.1 mouse_genomes_project 2 35653535 35657047 + MGP_LPJ_P0054352 Olfr360 protein_coding protein_coding MGP_LPJ_T0054353.1 MGP_LPJ_G0025616.1 mouse_genomes_project 2 35656093 35657047 + MGP_LPJ_P0054353 Olfr360 protein_coding protein_coding MGP_LPJ_T0003913.1 MGP_LPJ_G0003501.1 mouse_genomes_project 2 11079423 11081342 + Gm37126 antisense antisense MGP_LPJ_T0059017.1 MGP_LPJ_G0026804.1 mouse_genomes_project 2 170286586 170301103 - MGP_LPJ_P0059017 Wfdc3 protein_coding protein_coding MGP_LPJ_T0059018.1 MGP_LPJ_G0026804.1 mouse_genomes_project 2 170286586 170298485 - MGP_LPJ_P0059018 Wfdc3 protein_coding protein_coding MGP_LPJ_T0059019.1 MGP_LPJ_G0026804.1 mouse_genomes_project 2 170298736 170301103 - Wfdc3 protein_coding processed_transcript MGP_LPJ_T0055831.1 MGP_LPJ_G0026070.1 mouse_genomes_project 2 92226709 92265254 + MGP_LPJ_P0055831 Fnbp4 protein_coding protein_coding MGP_LPJ_T0055832.1 MGP_LPJ_G0026070.1 mouse_genomes_project 2 92226943 92259513 + Fnbp4 protein_coding processed_transcript MGP_LPJ_T0055833.1 MGP_LPJ_G0026070.1 mouse_genomes_project 2 92233235 92239281 + Fnbp4 protein_coding processed_transcript MGP_LPJ_T0055834.1 MGP_LPJ_G0026070.1 mouse_genomes_project 2 92239430 92245602 + Fnbp4 protein_coding processed_transcript MGP_LPJ_T0055835.1 MGP_LPJ_G0026070.1 mouse_genomes_project 2 92240233 92249673 + Fnbp4 protein_coding processed_transcript MGP_LPJ_T0055836.1 MGP_LPJ_G0026070.1 mouse_genomes_project 2 92245289 92249894 + Fnbp4 protein_coding processed_transcript MGP_LPJ_T0055837.1 MGP_LPJ_G0026070.1 mouse_genomes_project 2 92249922 92259407 + Fnbp4 protein_coding processed_transcript MGP_LPJ_T0055838.1 MGP_LPJ_G0026070.1 mouse_genomes_project 2 92250479 92259496 + Fnbp4 protein_coding processed_transcript MGP_LPJ_T0055839.1 MGP_LPJ_G0026070.1 mouse_genomes_project 2 92258580 92259404 + Fnbp4 protein_coding processed_transcript MGP_LPJ_T0007343.1 MGP_LPJ_G0006022.1 mouse_genomes_project 2 136294422 136312335 - Gm14095 lincRNA lincRNA MGP_LPJ_T0010406.1 MGP_LPJ_G0008524.1 mouse_genomes_project 2 24496208 24496281 + Mir126a miRNA miRNA MGP_LPJ_T0052166.1 MGP_LPJ_G0025235.1 mouse_genomes_project 2 306276 314643 + MGP_LPJ_P0052166 Acbd7 protein_coding unknown_likely_coding MGP_LPJ_T0052167.1 MGP_LPJ_G0025235.1 mouse_genomes_project 2 310045 314865 + MGP_LPJ_P0052167 Acbd7 protein_coding protein_coding MGP_LPJ_T0010511.1 MGP_LPJ_G0008629.1 mouse_genomes_project 2 186911072 186911149 + Mir1a-1 miRNA miRNA MGP_LPJ_T0058230.1 MGP_LPJ_G0026622.1 mouse_genomes_project 2 157822874 157841166 + Ccm2l protein_coding processed_transcript MGP_LPJ_T0058231.1 MGP_LPJ_G0026622.1 mouse_genomes_project 2 157822903 157828061 + Ccm2l protein_coding processed_transcript MGP_LPJ_T0058232.1 MGP_LPJ_G0026622.1 mouse_genomes_project 2 157822917 157827868 + MGP_LPJ_P0058232 Ccm2l protein_coding protein_coding MGP_LPJ_T0058233.1 MGP_LPJ_G0026622.1 mouse_genomes_project 2 157822926 157840644 + MGP_LPJ_P0058233 Ccm2l protein_coding protein_coding MGP_LPJ_T0098530.1 MGP_LPJ_G0036805.1 mouse_genomes_project 2 149638233 149684318 + Gm14093 sense_intronic sense_intronic MGP_LPJ_T0052957.1 MGP_LPJ_G0025371.1 mouse_genomes_project 2 23171848 23175918 - Dpp7 protein_coding processed_transcript MGP_LPJ_T0052958.1 MGP_LPJ_G0025371.1 mouse_genomes_project 2 23171859 23175904 - Dpp7 protein_coding processed_transcript MGP_LPJ_T0052959.1 MGP_LPJ_G0025371.1 mouse_genomes_project 2 23171862 23172447 - Dpp7 protein_coding processed_transcript MGP_LPJ_T0052960.1 MGP_LPJ_G0025371.1 mouse_genomes_project 2 23171862 23175932 - MGP_LPJ_P0052960 Dpp7 protein_coding protein_coding MGP_LPJ_T0052961.1 MGP_LPJ_G0025371.1 mouse_genomes_project 2 23172726 23175631 - Dpp7 protein_coding processed_transcript MGP_LPJ_T0052962.1 MGP_LPJ_G0025371.1 mouse_genomes_project 2 23172932 23175870 - Dpp7 protein_coding processed_transcript MGP_LPJ_T0052963.1 MGP_LPJ_G0025371.1 mouse_genomes_project 2 23174040 23175870 - Dpp7 protein_coding processed_transcript MGP_LPJ_T0052964.1 MGP_LPJ_G0025371.1 mouse_genomes_project 2 23174569 23175926 - Dpp7 protein_coding processed_transcript MGP_LPJ_T0052965.1 MGP_LPJ_G0025371.1 mouse_genomes_project 2 23175014 23175919 - Dpp7 protein_coding processed_transcript MGP_LPJ_T0052966.1 MGP_LPJ_G0025371.1 mouse_genomes_project 2 23175275 23175905 - Dpp7 protein_coding processed_transcript MGP_LPJ_T0058348.1 MGP_LPJ_G0026654.1 mouse_genomes_project 2 159420576 159423624 + 1700003F12Rik protein_coding retained_intron MGP_LPJ_T0058350.1 MGP_LPJ_G0026654.1 mouse_genomes_project 2 159422693 159423809 + MGP_LPJ_P0058350 1700003F12Rik protein_coding protein_coding MGP_LPJ_T0058351.1 MGP_LPJ_G0026654.1 mouse_genomes_project 2 159422732 159423809 + MGP_LPJ_P0058351 1700003F12Rik protein_coding protein_coding MGP_LPJ_T0003992.1 MGP_LPJ_G0003562.1 mouse_genomes_project 2 59996477 59999639 + Gm13583 antisense antisense MGP_LPJ_T0003993.1 MGP_LPJ_G0003562.1 mouse_genomes_project 2 59996479 59996602 + Gm13583 antisense antisense MGP_LPJ_T0003994.1 MGP_LPJ_G0003562.1 mouse_genomes_project 2 59998070 59998990 + Gm13583 antisense antisense MGP_LPJ_T0013619.1 MGP_LPJ_G0011710.1 mouse_genomes_project 2 88651754 88652478 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007230.1 MGP_LPJ_G0005932.1 mouse_genomes_project 2 67413799 67424051 - Gm26743 lincRNA lincRNA MGP_LPJ_T0007438.1 MGP_LPJ_G0006102.1 mouse_genomes_project 2 177273444 177278427 + 1700007M16Rik lincRNA lincRNA MGP_LPJ_T0010431.1 MGP_LPJ_G0008549.1 mouse_genomes_project 2 37509556 37509632 + Mir181a-2 miRNA miRNA MGP_LPJ_T0058663.1 MGP_LPJ_G0026706.1 mouse_genomes_project 2 161904510 161905846 - MGP_LPJ_P0058663 4930518I15Rik protein_coding protein_coding MGP_LPJ_T0056516.1 MGP_LPJ_G0026203.1 mouse_genomes_project 2 114194157 114195096 - MGP_LPJ_P0056516 protein_coding protein_coding MGP_LPJ_T0057354.1 MGP_LPJ_G0026394.1 mouse_genomes_project 2 130854833 130857051 + MGP_LPJ_P0057354 Dusp2 protein_coding protein_coding MGP_LPJ_T0057355.1 MGP_LPJ_G0026394.1 mouse_genomes_project 2 130855284 130856179 + Dusp2 protein_coding retained_intron MGP_LPJ_T0013732.1 MGP_LPJ_G0011823.1 mouse_genomes_project 2 136916519 136916885 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099334.1 MGP_LPJ_G0037597.1 mouse_genomes_project 2 71471393 71471497 + Gm23253 snRNA snRNA MGP_LPJ_T0053894.1 MGP_LPJ_G0025529.1 mouse_genomes_project 2 30545978 30564388 + MGP_LPJ_P0053894 Pomt1 protein_coding protein_coding MGP_LPJ_T0053895.1 MGP_LPJ_G0025529.1 mouse_genomes_project 2 30546031 30547089 + Pomt1 protein_coding retained_intron MGP_LPJ_T0053896.1 MGP_LPJ_G0025529.1 mouse_genomes_project 2 30546060 30553386 + Pomt1 protein_coding retained_intron MGP_LPJ_T0053897.1 MGP_LPJ_G0025529.1 mouse_genomes_project 2 30546073 30564388 + Pomt1 protein_coding retained_intron MGP_LPJ_T0053898.1 MGP_LPJ_G0025529.1 mouse_genomes_project 2 30546425 30553011 + MGP_LPJ_P0053898 Pomt1 protein_coding protein_coding MGP_LPJ_T0053899.1 MGP_LPJ_G0025529.1 mouse_genomes_project 2 30546727 30553101 + MGP_LPJ_P0053899 Pomt1 protein_coding protein_coding MGP_LPJ_T0053900.1 MGP_LPJ_G0025529.1 mouse_genomes_project 2 30553747 30560298 + MGP_LPJ_P0053900 Pomt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053901.1 MGP_LPJ_G0025529.1 mouse_genomes_project 2 30554678 30558080 + Pomt1 protein_coding retained_intron MGP_LPJ_T0053902.1 MGP_LPJ_G0025529.1 mouse_genomes_project 2 30556961 30561160 + Pomt1 protein_coding retained_intron MGP_LPJ_T0053903.1 MGP_LPJ_G0025529.1 mouse_genomes_project 2 30558051 30563181 + MGP_LPJ_P0053903 Pomt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053904.1 MGP_LPJ_G0025529.1 mouse_genomes_project 2 30560661 30562081 + Pomt1 protein_coding retained_intron MGP_LPJ_T0011515.1 MGP_LPJ_G0009633.1 mouse_genomes_project 2 66289507 66289791 + Gm23046 misc_RNA misc_RNA MGP_LPJ_T0010440.1 MGP_LPJ_G0008558.1 mouse_genomes_project 2 67521300 67521398 + Mir6335 miRNA miRNA MGP_LPJ_T0013636.1 MGP_LPJ_G0011727.1 mouse_genomes_project 2 96125390 96125987 - processed_pseudogene processed_pseudogene MGP_LPJ_T0052749.1 MGP_LPJ_G0025334.1 mouse_genomes_project 2 21906844 21913657 + MGP_LPJ_P0052749 Il1f9 protein_coding protein_coding MGP_LPJ_T0053563.1 MGP_LPJ_G0025480.1 mouse_genomes_project 2 28069787 28139703 + MGP_LPJ_P0053563 Sptan1 protein_coding protein_coding MGP_LPJ_T0053564.1 MGP_LPJ_G0025480.1 mouse_genomes_project 2 28069787 28139706 + MGP_LPJ_P0053564 Sptan1 protein_coding protein_coding MGP_LPJ_T0053565.1 MGP_LPJ_G0025480.1 mouse_genomes_project 2 28069904 28099435 + Sptan1 protein_coding retained_intron MGP_LPJ_T0053566.1 MGP_LPJ_G0025480.1 mouse_genomes_project 2 28069906 28071377 + Sptan1 protein_coding retained_intron MGP_LPJ_T0053567.1 MGP_LPJ_G0025480.1 mouse_genomes_project 2 28069907 28139700 + MGP_LPJ_P0053567 Sptan1 protein_coding protein_coding MGP_LPJ_T0053568.1 MGP_LPJ_G0025480.1 mouse_genomes_project 2 28069907 28139706 + MGP_LPJ_P0053568 Sptan1 protein_coding protein_coding MGP_LPJ_T0053569.1 MGP_LPJ_G0025480.1 mouse_genomes_project 2 28069907 28089088 + MGP_LPJ_P0053569 Sptan1 protein_coding protein_coding MGP_LPJ_T0053570.1 MGP_LPJ_G0025480.1 mouse_genomes_project 2 28069910 28139706 + MGP_LPJ_P0053570 Sptan1 protein_coding protein_coding MGP_LPJ_T0053571.1 MGP_LPJ_G0025480.1 mouse_genomes_project 2 28082601 28139439 + MGP_LPJ_P0053571 Sptan1 protein_coding protein_coding MGP_LPJ_T0053572.1 MGP_LPJ_G0025480.1 mouse_genomes_project 2 28097353 28099428 + Sptan1 protein_coding retained_intron MGP_LPJ_T0053573.1 MGP_LPJ_G0025480.1 mouse_genomes_project 2 28107303 28113524 + Sptan1 protein_coding retained_intron MGP_LPJ_T0053574.1 MGP_LPJ_G0025480.1 mouse_genomes_project 2 28109507 28112068 + Sptan1 protein_coding retained_intron MGP_LPJ_T0053575.1 MGP_LPJ_G0025480.1 mouse_genomes_project 2 28130075 28133238 + Sptan1 protein_coding retained_intron MGP_LPJ_T0053576.1 MGP_LPJ_G0025480.1 mouse_genomes_project 2 28135818 28138772 + Sptan1 protein_coding retained_intron MGP_LPJ_T0053577.1 MGP_LPJ_G0025480.1 mouse_genomes_project 2 28135851 28138756 + Sptan1 protein_coding retained_intron MGP_LPJ_T0053578.1 MGP_LPJ_G0025480.1 mouse_genomes_project 2 28138563 28139430 + Sptan1 protein_coding retained_intron MGP_LPJ_T0057032.1 MGP_LPJ_G0026322.1 mouse_genomes_project 2 124434423 124456011 + MGP_LPJ_P0057032 Map1a protein_coding protein_coding MGP_LPJ_T0057033.1 MGP_LPJ_G0026322.1 mouse_genomes_project 2 124434593 124435867 + Map1a protein_coding processed_transcript MGP_LPJ_T0057034.1 MGP_LPJ_G0026322.1 mouse_genomes_project 2 124440274 124454609 + MGP_LPJ_P0057034 Map1a protein_coding protein_coding MGP_LPJ_T0057035.1 MGP_LPJ_G0026322.1 mouse_genomes_project 2 124440283 124452792 + Map1a protein_coding processed_transcript MGP_LPJ_T0010407.1 MGP_LPJ_G0008525.1 mouse_genomes_project 2 24496214 24496272 - Mir126b miRNA miRNA MGP_LPJ_T0007269.1 MGP_LPJ_G0005964.1 mouse_genomes_project 2 92766170 92767376 + A330069E16Rik lincRNA lincRNA MGP_LPJ_T0055190.1 MGP_LPJ_G0025772.1 mouse_genomes_project 2 73772574 73820302 - MGP_LPJ_P0055190 Chn1 protein_coding protein_coding MGP_LPJ_T0055191.1 MGP_LPJ_G0025772.1 mouse_genomes_project 2 73772582 73938521 - MGP_LPJ_P0055191 Chn1 protein_coding protein_coding MGP_LPJ_T0055192.1 MGP_LPJ_G0025772.1 mouse_genomes_project 2 73772582 73938521 - MGP_LPJ_P0055192 Chn1 protein_coding protein_coding MGP_LPJ_T0055193.1 MGP_LPJ_G0025772.1 mouse_genomes_project 2 73775006 73879858 - MGP_LPJ_P0055193 Chn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0055194.1 MGP_LPJ_G0025772.1 mouse_genomes_project 2 73786057 73815429 - MGP_LPJ_P0055194 Chn1 protein_coding protein_coding MGP_LPJ_T0055195.1 MGP_LPJ_G0025772.1 mouse_genomes_project 2 73786775 73938501 - MGP_LPJ_P0055195 Chn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0055196.1 MGP_LPJ_G0025772.1 mouse_genomes_project 2 73838639 73938248 - MGP_LPJ_P0055196 Chn1 protein_coding protein_coding MGP_LPJ_T0057498.1 MGP_LPJ_G0026435.1 mouse_genomes_project 2 133982203 133992541 + MGP_LPJ_P0057498 Nop56 protein_coding protein_coding MGP_LPJ_T0057499.1 MGP_LPJ_G0026435.1 mouse_genomes_project 2 133982217 133992540 + Nop56 protein_coding retained_intron MGP_LPJ_T0057500.1 MGP_LPJ_G0026435.1 mouse_genomes_project 2 133982219 133992087 + Nop56 protein_coding retained_intron MGP_LPJ_T0057501.1 MGP_LPJ_G0026435.1 mouse_genomes_project 2 133982228 133985311 + MGP_LPJ_P0057501 Nop56 protein_coding protein_coding MGP_LPJ_T0057502.1 MGP_LPJ_G0026435.1 mouse_genomes_project 2 133982265 133983872 + MGP_LPJ_P0057502 Nop56 protein_coding protein_coding MGP_LPJ_T0057503.1 MGP_LPJ_G0026435.1 mouse_genomes_project 2 133982604 133983470 + Nop56 protein_coding retained_intron MGP_LPJ_T0057504.1 MGP_LPJ_G0026435.1 mouse_genomes_project 2 133983569 133984040 + Nop56 protein_coding retained_intron MGP_LPJ_T0057505.1 MGP_LPJ_G0026435.1 mouse_genomes_project 2 133984438 133985056 + Nop56 protein_coding retained_intron MGP_LPJ_T0057506.1 MGP_LPJ_G0026435.1 mouse_genomes_project 2 133984490 133992481 + MGP_LPJ_P0057506 Nop56 protein_coding protein_coding MGP_LPJ_T0057507.1 MGP_LPJ_G0026435.1 mouse_genomes_project 2 133986200 133992508 + Nop56 protein_coding retained_intron MGP_LPJ_T0055449.1 MGP_LPJ_G0025827.1 mouse_genomes_project 2 84504678 84508165 + MGP_LPJ_P0055449 protein_coding protein_coding MGP_LPJ_T0055450.1 MGP_LPJ_G0025827.1 mouse_genomes_project 2 84505123 84506314 + MGP_LPJ_P0055450 protein_coding protein_coding MGP_LPJ_T0053102.1 MGP_LPJ_G0025398.1 mouse_genomes_project 2 23557968 23558951 + MGP_LPJ_P0053102 Bmyc protein_coding protein_coding MGP_LPJ_T0013476.1 MGP_LPJ_G0011567.1 mouse_genomes_project 2 38884790 38885157 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102022.1 MGP_LPJ_G0040059.1 mouse_genomes_project 2 85648958 85651500 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0053813.1 MGP_LPJ_G0025514.1 mouse_genomes_project 2 29469014 29519932 + MGP_LPJ_P0053813 Ncs1 protein_coding protein_coding MGP_LPJ_T0053814.1 MGP_LPJ_G0025514.1 mouse_genomes_project 2 29469357 29516262 + MGP_LPJ_P0053814 Ncs1 protein_coding nonsense_mediated_decay MGP_LPJ_T0059294.1 MGP_LPJ_G0026858.1 mouse_genomes_project 2 174044380 174065231 - MGP_LPJ_P0059294 protein_coding protein_coding MGP_LPJ_T0059295.1 MGP_LPJ_G0026858.1 mouse_genomes_project 2 174045613 174053034 - protein_coding retained_intron MGP_LPJ_T0059296.1 MGP_LPJ_G0026858.1 mouse_genomes_project 2 174045613 174065443 - MGP_LPJ_P0059296 protein_coding protein_coding MGP_LPJ_T0059297.1 MGP_LPJ_G0026858.1 mouse_genomes_project 2 174045614 174051295 - protein_coding retained_intron MGP_LPJ_T0059298.1 MGP_LPJ_G0026858.1 mouse_genomes_project 2 174045848 174048583 - protein_coding retained_intron MGP_LPJ_T0059299.1 MGP_LPJ_G0026858.1 mouse_genomes_project 2 174045874 174065180 - MGP_LPJ_P0059299 protein_coding nonsense_mediated_decay MGP_LPJ_T0059300.1 MGP_LPJ_G0026858.1 mouse_genomes_project 2 174045920 174058159 - protein_coding retained_intron MGP_LPJ_T0059301.1 MGP_LPJ_G0026858.1 mouse_genomes_project 2 174046716 174064928 - protein_coding processed_transcript MGP_LPJ_T0059302.1 MGP_LPJ_G0026858.1 mouse_genomes_project 2 174052946 174065082 - protein_coding retained_intron MGP_LPJ_T0059303.1 MGP_LPJ_G0026858.1 mouse_genomes_project 2 174054808 174065214 - protein_coding retained_intron MGP_LPJ_T0013711.1 MGP_LPJ_G0011802.1 mouse_genomes_project 2 131227760 131229603 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098707.1 MGP_LPJ_G0036972.1 mouse_genomes_project 2 187567057 187570474 + 9230112E08Rik sense_overlapping sense_overlapping MGP_LPJ_T0098708.1 MGP_LPJ_G0036972.1 mouse_genomes_project 2 187567364 187568727 + 9230112E08Rik sense_overlapping sense_overlapping MGP_LPJ_T0052862.1 MGP_LPJ_G0025350.1 mouse_genomes_project 2 22881037 22882849 + Entpd8 protein_coding retained_intron MGP_LPJ_T0052863.1 MGP_LPJ_G0025350.1 mouse_genomes_project 2 22881055 22886450 + MGP_LPJ_P0052863 Entpd8 protein_coding protein_coding MGP_LPJ_T0052864.1 MGP_LPJ_G0025350.1 mouse_genomes_project 2 22881058 22886450 + MGP_LPJ_P0052864 Entpd8 protein_coding protein_coding MGP_LPJ_T0052865.1 MGP_LPJ_G0025350.1 mouse_genomes_project 2 22881242 22886449 + Entpd8 protein_coding retained_intron MGP_LPJ_T0052866.1 MGP_LPJ_G0025350.1 mouse_genomes_project 2 22882544 22885886 + Entpd8 protein_coding retained_intron MGP_LPJ_T0052867.1 MGP_LPJ_G0025350.1 mouse_genomes_project 2 22882551 22886450 + MGP_LPJ_P0052867 Entpd8 protein_coding protein_coding MGP_LPJ_T0052868.1 MGP_LPJ_G0025350.1 mouse_genomes_project 2 22882766 22884468 + MGP_LPJ_P0052868 Entpd8 protein_coding nonsense_mediated_decay MGP_LPJ_T0052869.1 MGP_LPJ_G0025350.1 mouse_genomes_project 2 22885410 22886308 + Entpd8 protein_coding retained_intron MGP_LPJ_T0053500.1 MGP_LPJ_G0025473.1 mouse_genomes_project 2 27849846 27876182 - MGP_LPJ_P0053500 Trub2 protein_coding protein_coding MGP_LPJ_T0053503.1 MGP_LPJ_G0025473.1 mouse_genomes_project 2 27863486 27876194 - MGP_LPJ_P0053503 Trub2 protein_coding nonsense_mediated_decay MGP_LPJ_T0053504.1 MGP_LPJ_G0025473.1 mouse_genomes_project 2 27864880 27877036 - MGP_LPJ_P0053504 Trub2 protein_coding protein_coding MGP_LPJ_T0053505.1 MGP_LPJ_G0025473.1 mouse_genomes_project 2 27866263 27876168 - MGP_LPJ_P0053505 Trub2 protein_coding nonsense_mediated_decay MGP_LPJ_T0053506.1 MGP_LPJ_G0025473.1 mouse_genomes_project 2 27866332 27876156 - MGP_LPJ_P0053506 Trub2 protein_coding protein_coding MGP_LPJ_T0053507.1 MGP_LPJ_G0025473.1 mouse_genomes_project 2 27867169 27876205 - MGP_LPJ_P0053507 Trub2 protein_coding nonsense_mediated_decay MGP_LPJ_T0053508.1 MGP_LPJ_G0025473.1 mouse_genomes_project 2 27867328 27870887 - Trub2 protein_coding retained_intron MGP_LPJ_T0053509.1 MGP_LPJ_G0025473.1 mouse_genomes_project 2 27867785 27870741 - Trub2 protein_coding retained_intron MGP_LPJ_T0053510.1 MGP_LPJ_G0025473.1 mouse_genomes_project 2 27871763 27876164 - Trub2 protein_coding retained_intron MGP_LPJ_T0053511.1 MGP_LPJ_G0025473.1 mouse_genomes_project 2 27873456 27876167 - Trub2 protein_coding retained_intron MGP_LPJ_T0013477.1 MGP_LPJ_G0011568.1 mouse_genomes_project 2 39001830 39002347 + processed_pseudogene processed_pseudogene MGP_LPJ_T0053011.1 MGP_LPJ_G0025379.1 mouse_genomes_project 2 23286619 23288458 + Clic3 protein_coding processed_transcript MGP_LPJ_T0053012.1 MGP_LPJ_G0025379.1 mouse_genomes_project 2 23286619 23288558 + MGP_LPJ_P0053012 Clic3 protein_coding protein_coding MGP_LPJ_T0053013.1 MGP_LPJ_G0025379.1 mouse_genomes_project 2 23286630 23288558 + MGP_LPJ_P0053013 Clic3 protein_coding protein_coding MGP_LPJ_T0053014.1 MGP_LPJ_G0025379.1 mouse_genomes_project 2 23286672 23288558 + Clic3 protein_coding processed_transcript MGP_LPJ_T0053015.1 MGP_LPJ_G0025379.1 mouse_genomes_project 2 23286678 23288465 + Clic3 protein_coding processed_transcript MGP_LPJ_T0053016.1 MGP_LPJ_G0025379.1 mouse_genomes_project 2 23287417 23287997 + Clic3 protein_coding processed_transcript MGP_LPJ_T0055997.1 MGP_LPJ_G0026091.1 mouse_genomes_project 2 93190533 93201623 - MGP_LPJ_P0055997 F2 protein_coding protein_coding MGP_LPJ_T0055998.1 MGP_LPJ_G0026091.1 mouse_genomes_project 2 93190542 93201616 - MGP_LPJ_P0055998 F2 protein_coding protein_coding MGP_LPJ_T0055999.1 MGP_LPJ_G0026091.1 mouse_genomes_project 2 93196383 93201604 - F2 protein_coding processed_transcript MGP_LPJ_T0013660.1 MGP_LPJ_G0011751.1 mouse_genomes_project 2 105980401 105980640 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004146.1 MGP_LPJ_G0003668.1 mouse_genomes_project 2 157380201 157381640 - 1700030C14Rik antisense antisense MGP_LPJ_T0055044.1 MGP_LPJ_G0025745.1 mouse_genomes_project 2 70449815 70465273 + MGP_LPJ_P0055044 Gad1 protein_coding protein_coding MGP_LPJ_T0055045.1 MGP_LPJ_G0025745.1 mouse_genomes_project 2 70458476 70502855 + MGP_LPJ_P0055045 Gad1 protein_coding protein_coding MGP_LPJ_T0055046.1 MGP_LPJ_G0025745.1 mouse_genomes_project 2 70458476 70485073 + MGP_LPJ_P0055046 Gad1 protein_coding nonsense_mediated_decay MGP_LPJ_T0055047.1 MGP_LPJ_G0025745.1 mouse_genomes_project 2 70458597 70475145 + Gad1 protein_coding retained_intron MGP_LPJ_T0055048.1 MGP_LPJ_G0025745.1 mouse_genomes_project 2 70458630 70482617 + MGP_LPJ_P0055048 Gad1 protein_coding protein_coding MGP_LPJ_T0055049.1 MGP_LPJ_G0025745.1 mouse_genomes_project 2 70459331 70483138 + MGP_LPJ_P0055049 Gad1 protein_coding protein_coding MGP_LPJ_T0055050.1 MGP_LPJ_G0025745.1 mouse_genomes_project 2 70459874 70483963 + MGP_LPJ_P0055050 Gad1 protein_coding protein_coding MGP_LPJ_T0055051.1 MGP_LPJ_G0025745.1 mouse_genomes_project 2 70464418 70502853 + Gad1 protein_coding processed_transcript MGP_LPJ_T0053297.1 MGP_LPJ_G0025432.1 mouse_genomes_project 2 24833654 24837471 + MGP_LPJ_P0053297 Surf2 protein_coding protein_coding MGP_LPJ_T0053298.1 MGP_LPJ_G0025432.1 mouse_genomes_project 2 24833668 24837460 + Surf2 protein_coding processed_transcript MGP_LPJ_T0053299.1 MGP_LPJ_G0025432.1 mouse_genomes_project 2 24833956 24837109 + Surf2 protein_coding processed_transcript MGP_LPJ_T0053300.1 MGP_LPJ_G0025432.1 mouse_genomes_project 2 24833956 24837454 + Surf2 protein_coding retained_intron MGP_LPJ_T0053301.1 MGP_LPJ_G0025432.1 mouse_genomes_project 2 24834100 24837241 + Surf2 protein_coding processed_transcript MGP_LPJ_T0053302.1 MGP_LPJ_G0025432.1 mouse_genomes_project 2 24834715 24837123 + Surf2 protein_coding processed_transcript MGP_LPJ_T0055691.1 MGP_LPJ_G0025965.1 mouse_genomes_project 2 88899515 88900466 + MGP_LPJ_P0055691 Olfr152 protein_coding protein_coding MGP_LPJ_T0055692.1 MGP_LPJ_G0025965.1 mouse_genomes_project 2 88899521 88900466 + MGP_LPJ_P0055692 Olfr152 protein_coding protein_coding MGP_LPJ_T0013823.1 MGP_LPJ_G0011914.1 mouse_genomes_project 2 172811689 172812245 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011520.1 MGP_LPJ_G0009638.1 mouse_genomes_project 2 107382544 107382804 - Gm27715 misc_RNA misc_RNA MGP_LPJ_T0057172.1 MGP_LPJ_G0026354.1 mouse_genomes_project 2 125865808 125882200 - MGP_LPJ_P0057172 Gatm protein_coding protein_coding MGP_LPJ_T0057173.1 MGP_LPJ_G0026354.1 mouse_genomes_project 2 125866753 125869775 - Gatm protein_coding processed_transcript MGP_LPJ_T0057174.1 MGP_LPJ_G0026354.1 mouse_genomes_project 2 125866870 125870053 - Gatm protein_coding retained_intron MGP_LPJ_T0013691.1 MGP_LPJ_G0011782.1 mouse_genomes_project 2 117503476 117504258 + processed_pseudogene processed_pseudogene MGP_LPJ_T0054741.1 MGP_LPJ_G0025689.1 mouse_genomes_project 2 59315585 59552404 - MGP_LPJ_P0054741 Baz2b protein_coding protein_coding MGP_LPJ_T0054742.1 MGP_LPJ_G0025689.1 mouse_genomes_project 2 59315667 59427765 - MGP_LPJ_P0054742 Baz2b protein_coding protein_coding MGP_LPJ_T0054743.1 MGP_LPJ_G0025689.1 mouse_genomes_project 2 59316875 59431666 - MGP_LPJ_P0054743 Baz2b protein_coding unknown_likely_coding MGP_LPJ_T0054744.1 MGP_LPJ_G0025689.1 mouse_genomes_project 2 59319411 59328774 - MGP_LPJ_P0054744 Baz2b protein_coding protein_coding MGP_LPJ_T0054745.1 MGP_LPJ_G0025689.1 mouse_genomes_project 2 59330417 59340185 - Baz2b protein_coding processed_transcript MGP_LPJ_T0054746.1 MGP_LPJ_G0025689.1 mouse_genomes_project 2 59333163 59336804 - Baz2b protein_coding processed_transcript MGP_LPJ_T0054747.1 MGP_LPJ_G0025689.1 mouse_genomes_project 2 59340974 59366817 - MGP_LPJ_P0054747 Baz2b protein_coding protein_coding MGP_LPJ_T0054748.1 MGP_LPJ_G0025689.1 mouse_genomes_project 2 59372062 59378643 - Baz2b protein_coding processed_transcript MGP_LPJ_T0054749.1 MGP_LPJ_G0025689.1 mouse_genomes_project 2 59398145 59552447 - Baz2b protein_coding processed_transcript MGP_LPJ_T0054750.1 MGP_LPJ_G0025689.1 mouse_genomes_project 2 59404387 59516331 - Baz2b protein_coding processed_transcript MGP_LPJ_T0054751.1 MGP_LPJ_G0025689.1 mouse_genomes_project 2 59426126 59552299 - Baz2b protein_coding processed_transcript MGP_LPJ_T0054752.1 MGP_LPJ_G0025689.1 mouse_genomes_project 2 59502285 59642689 - Baz2b protein_coding processed_transcript MGP_LPJ_T0054753.1 MGP_LPJ_G0025689.1 mouse_genomes_project 2 59637876 59642651 - Baz2b protein_coding processed_transcript MGP_LPJ_T0054754.1 MGP_LPJ_G0025689.1 mouse_genomes_project 2 59638343 59642009 - Baz2b protein_coding processed_transcript MGP_LPJ_T0054755.1 MGP_LPJ_G0025689.1 mouse_genomes_project 2 59638344 59642598 - Baz2b protein_coding processed_transcript MGP_LPJ_T0059284.1 MGP_LPJ_G0026854.1 mouse_genomes_project 2 173784264 173819013 - Fam65c protein_coding processed_transcript MGP_LPJ_T0059285.1 MGP_LPJ_G0026854.1 mouse_genomes_project 2 173784266 173819013 - MGP_LPJ_P0059285 Fam65c protein_coding protein_coding MGP_LPJ_T0059286.1 MGP_LPJ_G0026854.1 mouse_genomes_project 2 173789212 173790910 - Fam65c protein_coding retained_intron MGP_LPJ_T0059287.1 MGP_LPJ_G0026854.1 mouse_genomes_project 2 173792939 173795485 - Fam65c protein_coding retained_intron MGP_LPJ_T0004174.1 MGP_LPJ_G0003691.1 mouse_genomes_project 2 169627434 169632333 + Gm11455 antisense antisense MGP_LPJ_T0011533.1 MGP_LPJ_G0009651.1 mouse_genomes_project 2 161392315 161392531 + Gm22316 misc_RNA misc_RNA MGP_LPJ_T0007426.1 MGP_LPJ_G0006091.1 mouse_genomes_project 2 175022639 175027017 + Gm14258 lincRNA lincRNA MGP_LPJ_T0059035.1 MGP_LPJ_G0026809.1 mouse_genomes_project 2 170353287 170356968 - Acot8 protein_coding retained_intron MGP_LPJ_T0059036.1 MGP_LPJ_G0026809.1 mouse_genomes_project 2 170353287 170365251 - MGP_LPJ_P0059036 Acot8 protein_coding protein_coding MGP_LPJ_T0059037.1 MGP_LPJ_G0026809.1 mouse_genomes_project 2 170353287 170365251 - MGP_LPJ_P0059037 Acot8 protein_coding protein_coding MGP_LPJ_T0059038.1 MGP_LPJ_G0026809.1 mouse_genomes_project 2 170356286 170365250 - MGP_LPJ_P0059038 Acot8 protein_coding nonsense_mediated_decay MGP_LPJ_T0059039.1 MGP_LPJ_G0026809.1 mouse_genomes_project 2 170359938 170365191 - Acot8 protein_coding retained_intron MGP_LPJ_T0055566.1 MGP_LPJ_G0025860.1 mouse_genomes_project 2 86121538 86131801 + MGP_LPJ_P0055566 Olfr1000 protein_coding protein_coding MGP_LPJ_T0055820.1 MGP_LPJ_G0026068.1 mouse_genomes_project 2 91855522 91856215 - Ptprj protein_coding processed_transcript MGP_LPJ_T0055821.1 MGP_LPJ_G0026068.1 mouse_genomes_project 2 91855524 91931829 - MGP_LPJ_P0055821 Ptprj protein_coding protein_coding MGP_LPJ_T0055822.1 MGP_LPJ_G0026068.1 mouse_genomes_project 2 91859268 92039435 - MGP_LPJ_P0055822 Ptprj protein_coding protein_coding MGP_LPJ_T0055823.1 MGP_LPJ_G0026068.1 mouse_genomes_project 2 91864896 91931778 - MGP_LPJ_P0055823 Ptprj protein_coding protein_coding MGP_LPJ_T0007392.1 MGP_LPJ_G0006062.1 mouse_genomes_project 2 166235475 166236583 - Gm14228 lincRNA lincRNA MGP_LPJ_T0056027.1 MGP_LPJ_G0026096.1 mouse_genomes_project 2 93304428 93499013 + MGP_LPJ_P0056027 Ambra1 protein_coding protein_coding MGP_LPJ_T0056028.1 MGP_LPJ_G0026096.1 mouse_genomes_project 2 93304432 93499012 + MGP_LPJ_P0056028 Ambra1 protein_coding protein_coding MGP_LPJ_T0056029.1 MGP_LPJ_G0026096.1 mouse_genomes_project 2 93304476 93384867 + Ambra1 protein_coding processed_transcript MGP_LPJ_T0056030.1 MGP_LPJ_G0026096.1 mouse_genomes_project 2 93304476 93384867 + Ambra1 protein_coding processed_transcript MGP_LPJ_T0056031.1 MGP_LPJ_G0026096.1 mouse_genomes_project 2 93304478 93499012 + MGP_LPJ_P0056031 Ambra1 protein_coding protein_coding MGP_LPJ_T0056032.1 MGP_LPJ_G0026096.1 mouse_genomes_project 2 93304519 93499013 + MGP_LPJ_P0056032 Ambra1 protein_coding protein_coding MGP_LPJ_T0056033.1 MGP_LPJ_G0026096.1 mouse_genomes_project 2 93341323 93499013 + MGP_LPJ_P0056033 Ambra1 protein_coding protein_coding MGP_LPJ_T0056034.1 MGP_LPJ_G0026096.1 mouse_genomes_project 2 93350132 93399637 + Ambra1 protein_coding processed_transcript MGP_LPJ_T0056035.1 MGP_LPJ_G0026096.1 mouse_genomes_project 2 93385565 93400470 + Ambra1 protein_coding processed_transcript MGP_LPJ_T0007389.1 MGP_LPJ_G0006059.1 mouse_genomes_project 2 163522496 163522628 - Gm23925 lincRNA lincRNA MGP_LPJ_T0004001.1 MGP_LPJ_G0003569.1 mouse_genomes_project 2 65857369 65862347 + Gm13618 antisense antisense MGP_LPJ_T0013592.1 MGP_LPJ_G0011683.1 mouse_genomes_project 2 82668895 82669490 - processed_pseudogene processed_pseudogene MGP_LPJ_T0056357.1 MGP_LPJ_G0026156.1 mouse_genomes_project 2 106630727 106704370 - MGP_LPJ_P0056357 Hipk3 protein_coding protein_coding MGP_LPJ_T0056358.1 MGP_LPJ_G0026156.1 mouse_genomes_project 2 106634026 106703614 - MGP_LPJ_P0056358 Hipk3 protein_coding protein_coding MGP_LPJ_T0056359.1 MGP_LPJ_G0026156.1 mouse_genomes_project 2 106634100 106703878 - MGP_LPJ_P0056359 Hipk3 protein_coding protein_coding MGP_LPJ_T0056360.1 MGP_LPJ_G0026156.1 mouse_genomes_project 2 106638002 106643457 - Hipk3 protein_coding processed_transcript MGP_LPJ_T0057465.1 MGP_LPJ_G0026426.1 mouse_genomes_project 2 132991822 132998389 - MGP_LPJ_P0057465 Il1b protein_coding protein_coding MGP_LPJ_T0057466.1 MGP_LPJ_G0026426.1 mouse_genomes_project 2 132992374 132994605 - Il1b protein_coding processed_transcript MGP_LPJ_T0057467.1 MGP_LPJ_G0026426.1 mouse_genomes_project 2 132996982 132998389 - Il1b protein_coding retained_intron MGP_LPJ_T0011510.1 MGP_LPJ_G0009628.1 mouse_genomes_project 2 43980027 43980158 + Gm27761 misc_RNA misc_RNA MGP_LPJ_T0052302.1 MGP_LPJ_G0025259.1 mouse_genomes_project 2 3191413 3224680 - MGP_LPJ_P0052302 Proser2 protein_coding protein_coding MGP_LPJ_T0052303.1 MGP_LPJ_G0025259.1 mouse_genomes_project 2 3193832 3224615 - MGP_LPJ_P0052303 Proser2 protein_coding protein_coding MGP_LPJ_T0052304.1 MGP_LPJ_G0025259.1 mouse_genomes_project 2 3194913 3224608 - MGP_LPJ_P0052304 Proser2 protein_coding protein_coding MGP_LPJ_T0052305.1 MGP_LPJ_G0025259.1 mouse_genomes_project 2 3219275 3224650 - Proser2 protein_coding processed_transcript MGP_LPJ_T0100584.1 MGP_LPJ_G0038847.1 mouse_genomes_project 2 48505202 48505323 - Gm25215 snoRNA snoRNA MGP_LPJ_T0007151.1 MGP_LPJ_G0005869.1 mouse_genomes_project 2 8329669 8360882 + Gm13264 lincRNA lincRNA MGP_LPJ_T0099367.1 MGP_LPJ_G0037630.1 mouse_genomes_project 2 168997181 168997284 + Gm25881 snRNA snRNA MGP_LPJ_T0058316.1 MGP_LPJ_G0026645.1 mouse_genomes_project 2 158982894 158988810 + MGP_LPJ_P0058316 Bpifa5 protein_coding protein_coding MGP_LPJ_T0001090.1 MGP_LPJ_G0001015.1 mouse_genomes_project 2 22674922 22679914 - TEC TEC MGP_LPJ_T0052737.1 MGP_LPJ_G0025330.1 mouse_genomes_project 2 21025510 21111038 + MGP_LPJ_P0052737 Nxph2 protein_coding protein_coding MGP_LPJ_T0101518.1 MGP_LPJ_G0039644.1 mouse_genomes_project 2 35848612 35852503 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101519.1 MGP_LPJ_G0039644.1 mouse_genomes_project 2 35852071 35853016 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0057257.1 MGP_LPJ_G0026374.1 mouse_genomes_project 2 129421158 129596011 - MGP_LPJ_P0057257 Fam227b protein_coding protein_coding MGP_LPJ_T0057258.1 MGP_LPJ_G0026374.1 mouse_genomes_project 2 129421305 129595991 - MGP_LPJ_P0057258 Fam227b protein_coding protein_coding MGP_LPJ_T0057259.1 MGP_LPJ_G0026374.1 mouse_genomes_project 2 129421305 129589385 - MGP_LPJ_P0057259 Fam227b protein_coding protein_coding MGP_LPJ_T0057260.1 MGP_LPJ_G0026374.1 mouse_genomes_project 2 129440059 129596011 - Fam227b protein_coding retained_intron MGP_LPJ_T0055784.1 MGP_LPJ_G0026044.1 mouse_genomes_project 2 90935185 90936251 - MGP_LPJ_P0055784 protein_coding protein_coding MGP_LPJ_T0058882.1 MGP_LPJ_G0026753.1 mouse_genomes_project 2 168535120 168535942 - MGP_LPJ_P0058882 Gtsf1l protein_coding protein_coding MGP_LPJ_T0058378.1 MGP_LPJ_G0026664.1 mouse_genomes_project 2 159779237 159799501 - MGP_LPJ_P0058378 Eif2s2 protein_coding protein_coding MGP_LPJ_T0058379.1 MGP_LPJ_G0026664.1 mouse_genomes_project 2 159791091 159799628 - Eif2s2 protein_coding retained_intron MGP_LPJ_T0058380.1 MGP_LPJ_G0026664.1 mouse_genomes_project 2 159791126 159799605 - Eif2s2 protein_coding retained_intron MGP_LPJ_T0013695.1 MGP_LPJ_G0011786.1 mouse_genomes_project 2 122046641 122046910 + processed_pseudogene processed_pseudogene MGP_LPJ_T0058119.1 MGP_LPJ_G0026582.1 mouse_genomes_project 2 156518053 156551245 + MGP_LPJ_P0058119 Rspo4 protein_coding protein_coding MGP_LPJ_T0001091.1 MGP_LPJ_G0001016.1 mouse_genomes_project 2 30827144 30831427 + TEC TEC MGP_LPJ_T0013474.1 MGP_LPJ_G0011565.1 mouse_genomes_project 2 38348824 38348944 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001085.1 MGP_LPJ_G0001010.1 mouse_genomes_project 2 12508125 12510886 + TEC TEC MGP_LPJ_T0004162.1 MGP_LPJ_G0003683.1 mouse_genomes_project 2 166051210 166059193 - Gm27206 antisense antisense MGP_LPJ_T0013535.1 MGP_LPJ_G0011626.1 mouse_genomes_project 2 60701818 60702109 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013509.1 MGP_LPJ_G0011600.1 mouse_genomes_project 2 53555630 53557105 + processed_pseudogene processed_pseudogene MGP_LPJ_T0055276.1 MGP_LPJ_G0025796.1 mouse_genomes_project 2 76644726 76660190 + MGP_LPJ_P0055276 Rbm45 protein_coding protein_coding MGP_LPJ_T0013393.1 MGP_LPJ_G0011484.1 mouse_genomes_project 2 9426458 9427675 - processed_pseudogene processed_pseudogene MGP_LPJ_T0057726.1 MGP_LPJ_G0026481.1 mouse_genomes_project 2 136535830 136603866 + MGP_LPJ_P0057726 1110034G24Rik protein_coding protein_coding MGP_LPJ_T0057727.1 MGP_LPJ_G0026481.1 mouse_genomes_project 2 136539057 136603314 + MGP_LPJ_P0057727 1110034G24Rik protein_coding protein_coding MGP_LPJ_T0057728.1 MGP_LPJ_G0026481.1 mouse_genomes_project 2 136539183 136603866 + MGP_LPJ_P0057728 1110034G24Rik protein_coding protein_coding MGP_LPJ_T0057729.1 MGP_LPJ_G0026481.1 mouse_genomes_project 2 136549706 136603393 + 1110034G24Rik protein_coding processed_transcript MGP_LPJ_T0013601.1 MGP_LPJ_G0011692.1 mouse_genomes_project 2 84546540 84546911 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013647.1 MGP_LPJ_G0011738.1 mouse_genomes_project 2 102345105 102345892 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013761.1 MGP_LPJ_G0011852.1 mouse_genomes_project 2 150676332 150677289 + processed_pseudogene processed_pseudogene MGP_LPJ_T0053927.1 MGP_LPJ_G0025533.1 mouse_genomes_project 2 30628085 30678465 - MGP_LPJ_P0053927 Dnm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053928.1 MGP_LPJ_G0025533.1 mouse_genomes_project 2 30628085 30678466 - MGP_LPJ_P0053928 Dnm1 protein_coding protein_coding MGP_LPJ_T0053929.1 MGP_LPJ_G0025533.1 mouse_genomes_project 2 30628085 30678472 - MGP_LPJ_P0053929 Dnm1 protein_coding protein_coding MGP_LPJ_T0053930.1 MGP_LPJ_G0025533.1 mouse_genomes_project 2 30628085 30678484 - MGP_LPJ_P0053930 Dnm1 protein_coding protein_coding MGP_LPJ_T0053931.1 MGP_LPJ_G0025533.1 mouse_genomes_project 2 30628085 30678445 - MGP_LPJ_P0053931 Dnm1 protein_coding protein_coding MGP_LPJ_T0053932.1 MGP_LPJ_G0025533.1 mouse_genomes_project 2 30628085 30678520 - MGP_LPJ_P0053932 Dnm1 protein_coding protein_coding MGP_LPJ_T0053933.1 MGP_LPJ_G0025533.1 mouse_genomes_project 2 30628092 30678416 - MGP_LPJ_P0053933 Dnm1 protein_coding protein_coding MGP_LPJ_T0053934.1 MGP_LPJ_G0025533.1 mouse_genomes_project 2 30628111 30640636 - MGP_LPJ_P0053934 Dnm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053935.1 MGP_LPJ_G0025533.1 mouse_genomes_project 2 30628455 30678452 - MGP_LPJ_P0053935 Dnm1 protein_coding protein_coding MGP_LPJ_T0053936.1 MGP_LPJ_G0025533.1 mouse_genomes_project 2 30628538 30630250 - Dnm1 protein_coding retained_intron MGP_LPJ_T0053937.1 MGP_LPJ_G0025533.1 mouse_genomes_project 2 30629089 30632538 - MGP_LPJ_P0053937 Dnm1 protein_coding protein_coding MGP_LPJ_T0053938.1 MGP_LPJ_G0025533.1 mouse_genomes_project 2 30629093 30678484 - MGP_LPJ_P0053938 Dnm1 protein_coding protein_coding MGP_LPJ_T0053939.1 MGP_LPJ_G0025533.1 mouse_genomes_project 2 30629464 30632508 - MGP_LPJ_P0053939 Dnm1 protein_coding protein_coding MGP_LPJ_T0053940.1 MGP_LPJ_G0025533.1 mouse_genomes_project 2 30629877 30632504 - MGP_LPJ_P0053940 Dnm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053941.1 MGP_LPJ_G0025533.1 mouse_genomes_project 2 30631841 30637293 - Dnm1 protein_coding processed_transcript MGP_LPJ_T0053942.1 MGP_LPJ_G0025533.1 mouse_genomes_project 2 30631856 30632692 - Dnm1 protein_coding retained_intron MGP_LPJ_T0053943.1 MGP_LPJ_G0025533.1 mouse_genomes_project 2 30661221 30678433 - MGP_LPJ_P0053943 Dnm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0057324.1 MGP_LPJ_G0026387.1 mouse_genomes_project 2 130608079 130642264 - MGP_LPJ_P0057324 Ncaph protein_coding protein_coding MGP_LPJ_T0057325.1 MGP_LPJ_G0026387.1 mouse_genomes_project 2 130608097 130620811 - Ncaph protein_coding retained_intron MGP_LPJ_T0057326.1 MGP_LPJ_G0026387.1 mouse_genomes_project 2 130608220 130642212 - MGP_LPJ_P0057326 Ncaph protein_coding nonsense_mediated_decay MGP_LPJ_T0057327.1 MGP_LPJ_G0026387.1 mouse_genomes_project 2 130612843 130623023 - Ncaph protein_coding retained_intron MGP_LPJ_T0057328.1 MGP_LPJ_G0026387.1 mouse_genomes_project 2 130628781 130629919 - Ncaph protein_coding retained_intron MGP_LPJ_T0057329.1 MGP_LPJ_G0026387.1 mouse_genomes_project 2 130635529 130642207 - Ncaph protein_coding processed_transcript MGP_LPJ_T0001083.1 MGP_LPJ_G0001008.1 mouse_genomes_project 2 12414966 12416292 + TEC TEC MGP_LPJ_T0059149.1 MGP_LPJ_G0026831.1 mouse_genomes_project 2 171206064 171383759 + MGP_LPJ_P0059149 Eya2 protein_coding protein_coding MGP_LPJ_T0059150.1 MGP_LPJ_G0026831.1 mouse_genomes_project 2 171266571 171383767 + MGP_LPJ_P0059150 Eya2 protein_coding protein_coding MGP_LPJ_T0059151.1 MGP_LPJ_G0026831.1 mouse_genomes_project 2 171266591 171323076 + Eya2 protein_coding processed_transcript MGP_LPJ_T0059152.1 MGP_LPJ_G0026831.1 mouse_genomes_project 2 171320519 171378325 + Eya2 protein_coding processed_transcript MGP_LPJ_T0059153.1 MGP_LPJ_G0026831.1 mouse_genomes_project 2 171373888 171379194 + Eya2 protein_coding processed_transcript MGP_LPJ_T0059154.1 MGP_LPJ_G0026831.1 mouse_genomes_project 2 171381437 171383302 + Eya2 protein_coding processed_transcript MGP_LPJ_T0007380.1 MGP_LPJ_G0006052.1 mouse_genomes_project 2 160039195 160041485 - 2310005A03Rik lincRNA lincRNA MGP_LPJ_T0010360.1 MGP_LPJ_G0008478.1 mouse_genomes_project 2 7727508 7727606 + Mir669l miRNA miRNA MGP_LPJ_T0057699.1 MGP_LPJ_G0026477.1 mouse_genomes_project 2 136021403 136025519 - MGP_LPJ_P0057699 protein_coding protein_coding MGP_LPJ_T0057700.1 MGP_LPJ_G0026477.1 mouse_genomes_project 2 136022115 136024801 - protein_coding processed_transcript MGP_LPJ_T0057701.1 MGP_LPJ_G0026477.1 mouse_genomes_project 2 136023535 136025172 - protein_coding retained_intron MGP_LPJ_T0057702.1 MGP_LPJ_G0026477.1 mouse_genomes_project 2 136023635 136024807 - protein_coding retained_intron MGP_LPJ_T0013484.1 MGP_LPJ_G0011575.1 mouse_genomes_project 2 44729176 44730175 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003963.1 MGP_LPJ_G0003540.1 mouse_genomes_project 2 31219423 31221406 + Gm13524 antisense antisense MGP_LPJ_T0007144.1 MGP_LPJ_G0005864.1 mouse_genomes_project 2 4652968 4654326 + Gm28641 lincRNA lincRNA MGP_LPJ_T0055270.1 MGP_LPJ_G0025792.1 mouse_genomes_project 2 76183608 76184793 - MGP_LPJ_P0055270 protein_coding protein_coding MGP_LPJ_T0053815.1 MGP_LPJ_G0025515.1 mouse_genomes_project 2 29538293 29690506 + MGP_LPJ_P0053815 Hmcn2 protein_coding protein_coding MGP_LPJ_T0053816.1 MGP_LPJ_G0025515.1 mouse_genomes_project 2 29538293 29690163 + MGP_LPJ_P0053816 Hmcn2 protein_coding unknown_likely_coding MGP_LPJ_T0053817.1 MGP_LPJ_G0025515.1 mouse_genomes_project 2 29624149 29629687 + MGP_LPJ_P0053817 Hmcn2 protein_coding protein_coding MGP_LPJ_T0053818.1 MGP_LPJ_G0025515.1 mouse_genomes_project 2 29665754 29690492 + Hmcn2 protein_coding retained_intron MGP_LPJ_T0053819.1 MGP_LPJ_G0025515.1 mouse_genomes_project 2 29674410 29690505 + Hmcn2 protein_coding processed_transcript MGP_LPJ_T0053820.1 MGP_LPJ_G0025515.1 mouse_genomes_project 2 29684476 29687759 + Hmcn2 protein_coding retained_intron MGP_LPJ_T0056941.1 MGP_LPJ_G0026309.1 mouse_genomes_project 2 123854359 123870432 - MGP_LPJ_P0056941 Cdan1 protein_coding protein_coding MGP_LPJ_T0056942.1 MGP_LPJ_G0026309.1 mouse_genomes_project 2 123854715 123870433 - MGP_LPJ_P0056942 Cdan1 protein_coding protein_coding MGP_LPJ_T0056943.1 MGP_LPJ_G0026309.1 mouse_genomes_project 2 123856372 123978433 - Cdan1 protein_coding processed_transcript MGP_LPJ_T0056944.1 MGP_LPJ_G0026309.1 mouse_genomes_project 2 123856807 123858699 - Cdan1 protein_coding processed_transcript MGP_LPJ_T0056945.1 MGP_LPJ_G0026309.1 mouse_genomes_project 2 123861269 123863370 - Cdan1 protein_coding retained_intron MGP_LPJ_T0056946.1 MGP_LPJ_G0026309.1 mouse_genomes_project 2 123864525 123866892 - Cdan1 protein_coding retained_intron MGP_LPJ_T0056947.1 MGP_LPJ_G0026309.1 mouse_genomes_project 2 123866832 123867553 - Cdan1 protein_coding retained_intron MGP_LPJ_T0056948.1 MGP_LPJ_G0026309.1 mouse_genomes_project 2 123867542 123870421 - Cdan1 protein_coding processed_transcript MGP_LPJ_T0056949.1 MGP_LPJ_G0026309.1 mouse_genomes_project 2 123868856 123870405 - Cdan1 protein_coding processed_transcript MGP_LPJ_T0053065.1 MGP_LPJ_G0025387.1 mouse_genomes_project 2 23411500 23415463 - MGP_LPJ_P0053065 Phpt1 protein_coding protein_coding MGP_LPJ_T0053066.1 MGP_LPJ_G0025387.1 mouse_genomes_project 2 23411572 23415117 - Phpt1 protein_coding processed_transcript MGP_LPJ_T0007266.1 MGP_LPJ_G0005961.1 mouse_genomes_project 2 84985736 85010851 - Gm13710 lincRNA lincRNA MGP_LPJ_T0055241.1 MGP_LPJ_G0025782.1 mouse_genomes_project 2 74882921 74885114 + MGP_LPJ_P0055241 Hoxd8 protein_coding protein_coding MGP_LPJ_T0055242.1 MGP_LPJ_G0025782.1 mouse_genomes_project 2 74883211 74886235 + MGP_LPJ_P0055242 Hoxd8 protein_coding protein_coding MGP_LPJ_T0055243.1 MGP_LPJ_G0025782.1 mouse_genomes_project 2 74883454 74885609 + MGP_LPJ_P0055243 Hoxd8 protein_coding protein_coding MGP_LPJ_T0013704.1 MGP_LPJ_G0011795.1 mouse_genomes_project 2 124900518 124901478 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007324.1 MGP_LPJ_G0006007.1 mouse_genomes_project 2 120811458 120894944 + 4930412B13Rik lincRNA lincRNA MGP_LPJ_T0010469.1 MGP_LPJ_G0008587.1 mouse_genomes_project 2 121246243 121246341 - Gm22800 miRNA miRNA MGP_LPJ_T0098028.1 MGP_LPJ_G0036309.1 mouse_genomes_project 2 113126879 113127088 - pseudogene pseudogene MGP_LPJ_T0004053.1 MGP_LPJ_G0003604.1 mouse_genomes_project 2 95109075 95122766 + Gm13807 antisense antisense MGP_LPJ_T0011526.1 MGP_LPJ_G0009644.1 mouse_genomes_project 2 129729873 129730165 - Gm24739 misc_RNA misc_RNA MGP_LPJ_T0004106.1 MGP_LPJ_G0003639.1 mouse_genomes_project 2 135324254 135325820 + Gm14285 antisense antisense MGP_LPJ_T0011527.1 MGP_LPJ_G0009645.1 mouse_genomes_project 2 131002681 131002973 - Gm22613 misc_RNA misc_RNA MGP_LPJ_T0053067.1 MGP_LPJ_G0025388.1 mouse_genomes_project 2 23415721 23422034 - MGP_LPJ_P0053067 Gm996 protein_coding protein_coding MGP_LPJ_T0053068.1 MGP_LPJ_G0025388.1 mouse_genomes_project 2 23415735 23422063 - MGP_LPJ_P0053068 Gm996 protein_coding protein_coding MGP_LPJ_T0053069.1 MGP_LPJ_G0025388.1 mouse_genomes_project 2 23417278 23420203 - MGP_LPJ_P0053069 Gm996 protein_coding protein_coding MGP_LPJ_T0053070.1 MGP_LPJ_G0025388.1 mouse_genomes_project 2 23420116 23420569 - MGP_LPJ_P0053070 Gm996 protein_coding protein_coding MGP_LPJ_T0055781.1 MGP_LPJ_G0026043.1 mouse_genomes_project 2 90915947 90916892 - MGP_LPJ_P0055781 Olfr1247 protein_coding protein_coding MGP_LPJ_T0055782.1 MGP_LPJ_G0026043.1 mouse_genomes_project 2 90915947 90920772 - MGP_LPJ_P0055782 Olfr1247 protein_coding protein_coding MGP_LPJ_T0055783.1 MGP_LPJ_G0026043.1 mouse_genomes_project 2 90916648 90918437 - MGP_LPJ_P0055783 Olfr1247 protein_coding protein_coding MGP_LPJ_T0056762.1 MGP_LPJ_G0026279.1 mouse_genomes_project 2 122443092 122551922 - MGP_LPJ_P0056762 Ino80 protein_coding protein_coding MGP_LPJ_T0056763.1 MGP_LPJ_G0026279.1 mouse_genomes_project 2 122473506 122551848 - MGP_LPJ_P0056763 Ino80 protein_coding protein_coding MGP_LPJ_T0056764.1 MGP_LPJ_G0026279.1 mouse_genomes_project 2 122505115 122511510 - Ino80 protein_coding retained_intron MGP_LPJ_T0003895.1 MGP_LPJ_G0003488.1 mouse_genomes_project 2 760567 762759 - Gm13185 antisense antisense MGP_LPJ_T0013683.1 MGP_LPJ_G0011774.1 mouse_genomes_project 2 114244777 114245716 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010375.1 MGP_LPJ_G0008493.1 mouse_genomes_project 2 7782582 7782679 + Mir669a-2 miRNA miRNA MGP_LPJ_T0010505.1 MGP_LPJ_G0008623.1 mouse_genomes_project 2 179922055 179922174 - Mir6340 miRNA miRNA MGP_LPJ_T0001127.1 MGP_LPJ_G0001052.1 mouse_genomes_project 2 130783344 130783954 - TEC TEC MGP_LPJ_T0001128.1 MGP_LPJ_G0001052.1 mouse_genomes_project 2 130783608 130783932 - TEC TEC MGP_LPJ_T0055813.1 MGP_LPJ_G0026062.1 mouse_genomes_project 2 91503238 91504165 - MGP_LPJ_P0055813 Olfr32 protein_coding protein_coding MGP_LPJ_T0053108.1 MGP_LPJ_G0025403.1 mouse_genomes_project 2 23683845 23686230 + MGP_LPJ_P0053108 Lcn9 protein_coding protein_coding MGP_LPJ_T0059404.1 MGP_LPJ_G0026887.1 mouse_genomes_project 2 179278170 179304916 - MGP_LPJ_P0059404 Ctcfl protein_coding protein_coding MGP_LPJ_T0058751.1 MGP_LPJ_G0026725.1 mouse_genomes_project 2 163331695 163379905 - MGP_LPJ_P0058751 D630003M21Rik protein_coding protein_coding MGP_LPJ_T0058752.1 MGP_LPJ_G0026725.1 mouse_genomes_project 2 163335320 163379905 - MGP_LPJ_P0058752 D630003M21Rik protein_coding protein_coding MGP_LPJ_T0058753.1 MGP_LPJ_G0026725.1 mouse_genomes_project 2 163344952 163379905 - MGP_LPJ_P0058753 D630003M21Rik protein_coding protein_coding MGP_LPJ_T0007337.1 MGP_LPJ_G0006018.1 mouse_genomes_project 2 131797861 131799812 - Gm14012 lincRNA lincRNA MGP_LPJ_T0007300.1 MGP_LPJ_G0005988.1 mouse_genomes_project 2 108855739 108918948 - Gm14015 lincRNA lincRNA MGP_LPJ_T0013467.1 MGP_LPJ_G0011558.1 mouse_genomes_project 2 37835161 37835887 + processed_pseudogene processed_pseudogene MGP_LPJ_T0054628.1 MGP_LPJ_G0025666.1 mouse_genomes_project 2 51641129 51921546 - MGP_LPJ_P0054628 Cacnb4 protein_coding protein_coding MGP_LPJ_T0054629.1 MGP_LPJ_G0025666.1 mouse_genomes_project 2 51641134 51786820 - MGP_LPJ_P0054629 Cacnb4 protein_coding protein_coding MGP_LPJ_T0054630.1 MGP_LPJ_G0025666.1 mouse_genomes_project 2 51641134 51921789 - MGP_LPJ_P0054630 Cacnb4 protein_coding protein_coding MGP_LPJ_T0054631.1 MGP_LPJ_G0025666.1 mouse_genomes_project 2 51641134 51786827 - MGP_LPJ_P0054631 Cacnb4 protein_coding protein_coding MGP_LPJ_T0054632.1 MGP_LPJ_G0025666.1 mouse_genomes_project 2 51784446 51784969 - Cacnb4 protein_coding processed_transcript MGP_LPJ_T0054633.1 MGP_LPJ_G0025666.1 mouse_genomes_project 2 51920682 51921099 - Cacnb4 protein_coding processed_transcript MGP_LPJ_T0007405.1 MGP_LPJ_G0006075.1 mouse_genomes_project 2 171937955 171960366 + Gm11468 lincRNA lincRNA MGP_LPJ_T0102041.1 MGP_LPJ_G0040078.1 mouse_genomes_project 2 88313339 88314260 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0011519.1 MGP_LPJ_G0009637.1 mouse_genomes_project 2 78906993 78907223 - Gm23149 misc_RNA misc_RNA MGP_LPJ_T0007375.1 MGP_LPJ_G0006048.1 mouse_genomes_project 2 156413386 156415787 - 4930556L07Rik lincRNA lincRNA MGP_LPJ_T0003922.1 MGP_LPJ_G0003509.1 mouse_genomes_project 2 17901068 17925230 - Gm17171 antisense antisense MGP_LPJ_T0098414.1 MGP_LPJ_G0036695.1 mouse_genomes_project 2 177347783 177348047 - Gm26489 scaRNA scaRNA MGP_LPJ_T0055681.1 MGP_LPJ_G0025956.1 mouse_genomes_project 2 88766687 88773295 - MGP_LPJ_P0055681 protein_coding protein_coding MGP_LPJ_T0003961.1 MGP_LPJ_G0003538.1 mouse_genomes_project 2 30304811 30305512 - Gm13609 antisense antisense MGP_LPJ_T0054508.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43850074 43988398 - MGP_LPJ_P0054508 Zeb2 protein_coding protein_coding MGP_LPJ_T0054509.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43853563 43981840 - MGP_LPJ_P0054509 Zeb2 protein_coding protein_coding MGP_LPJ_T0054510.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43853565 43979372 - MGP_LPJ_P0054510 Zeb2 protein_coding protein_coding MGP_LPJ_T0054511.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43853565 43982134 - MGP_LPJ_P0054511 Zeb2 protein_coding protein_coding MGP_LPJ_T0054512.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43854776 43981857 - MGP_LPJ_P0054512 Zeb2 protein_coding protein_coding MGP_LPJ_T0054513.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43854843 43979145 - MGP_LPJ_P0054513 Zeb2 protein_coding protein_coding MGP_LPJ_T0054514.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43854884 43981745 - MGP_LPJ_P0054514 Zeb2 protein_coding protein_coding MGP_LPJ_T0054515.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43863578 43979309 - MGP_LPJ_P0054515 Zeb2 protein_coding protein_coding MGP_LPJ_T0054516.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43868465 43980031 - MGP_LPJ_P0054516 Zeb2 protein_coding protein_coding MGP_LPJ_T0054517.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43868490 43890162 - MGP_LPJ_P0054517 Zeb2 protein_coding protein_coding MGP_LPJ_T0054518.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43868556 43979101 - MGP_LPJ_P0054518 Zeb2 protein_coding protein_coding MGP_LPJ_T0054519.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43869455 43922065 - Zeb2 protein_coding processed_transcript MGP_LPJ_T0054520.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43869457 43980013 - MGP_LPJ_P0054520 Zeb2 protein_coding protein_coding MGP_LPJ_T0054521.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43875816 43979933 - Zeb2 protein_coding processed_transcript MGP_LPJ_T0054522.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43884677 43982123 - MGP_LPJ_P0054522 Zeb2 protein_coding protein_coding MGP_LPJ_T0054523.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43888078 43981944 - Zeb2 protein_coding retained_intron MGP_LPJ_T0054524.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43888153 43982100 - Zeb2 protein_coding retained_intron MGP_LPJ_T0054525.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43890150 43979484 - MGP_LPJ_P0054525 Zeb2 protein_coding protein_coding MGP_LPJ_T0054526.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43890235 43982139 - MGP_LPJ_P0054526 Zeb2 protein_coding protein_coding MGP_LPJ_T0054527.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43890306 43979611 - MGP_LPJ_P0054527 Zeb2 protein_coding protein_coding MGP_LPJ_T0054528.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43963416 43979590 - MGP_LPJ_P0054528 Zeb2 protein_coding protein_coding MGP_LPJ_T0054529.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43972444 43982103 - Zeb2 protein_coding processed_transcript MGP_LPJ_T0054530.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43972444 43979344 - Zeb2 protein_coding processed_transcript MGP_LPJ_T0054531.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43972444 43982071 - Zeb2 protein_coding processed_transcript MGP_LPJ_T0054532.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43973671 43978933 - Zeb2 protein_coding processed_transcript MGP_LPJ_T0054533.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43974532 43979341 - Zeb2 protein_coding processed_transcript MGP_LPJ_T0054534.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43974891 43981856 - Zeb2 protein_coding retained_intron MGP_LPJ_T0054535.1 MGP_LPJ_G0025649.1 mouse_genomes_project 2 43978945 43984511 - Zeb2 protein_coding processed_transcript MGP_LPJ_T0007325.1 MGP_LPJ_G0006008.1 mouse_genomes_project 2 121119430 121120027 - Gm29233 lincRNA lincRNA MGP_LPJ_T0003973.1 MGP_LPJ_G0003547.1 mouse_genomes_project 2 33535065 33554512 + Gm13449 antisense antisense MGP_LPJ_T0053002.1 MGP_LPJ_G0025377.1 mouse_genomes_project 2 23258486 23278324 + MGP_LPJ_P0053002 Abca2 protein_coding protein_coding MGP_LPJ_T0053003.1 MGP_LPJ_G0025377.1 mouse_genomes_project 2 23271091 23272701 + Abca2 protein_coding processed_transcript MGP_LPJ_T0053004.1 MGP_LPJ_G0025377.1 mouse_genomes_project 2 23272731 23273597 + Abca2 protein_coding processed_transcript MGP_LPJ_T0053005.1 MGP_LPJ_G0025377.1 mouse_genomes_project 2 23274945 23276649 + Abca2 protein_coding processed_transcript MGP_LPJ_T0053006.1 MGP_LPJ_G0025377.1 mouse_genomes_project 2 23275448 23276851 + Abca2 protein_coding processed_transcript MGP_LPJ_T0053007.1 MGP_LPJ_G0025377.1 mouse_genomes_project 2 23275605 23276326 + Abca2 protein_coding processed_transcript MGP_LPJ_T0053008.1 MGP_LPJ_G0025377.1 mouse_genomes_project 2 23275626 23276260 + Abca2 protein_coding processed_transcript MGP_LPJ_T0055679.1 MGP_LPJ_G0025954.1 mouse_genomes_project 2 88749476 88750406 + MGP_LPJ_P0055679 Olfr1131 protein_coding protein_coding MGP_LPJ_T0013617.1 MGP_LPJ_G0011708.1 mouse_genomes_project 2 88632511 88632804 - processed_pseudogene processed_pseudogene MGP_LPJ_T0058466.1 MGP_LPJ_G0026680.1 mouse_genomes_project 2 160759609 160805002 + MGP_LPJ_P0058466 Mmp24 protein_coding protein_coding MGP_LPJ_T0058467.1 MGP_LPJ_G0026680.1 mouse_genomes_project 2 160791258 160795680 + Mmp24 protein_coding retained_intron MGP_LPJ_T0017763.1 MGP_LPJ_G0015363.1 mouse_genomes_project 2 96147253 96152782 + 2810002D19Rik processed_transcript processed_transcript MGP_LPJ_T0102009.1 MGP_LPJ_G0040046.1 mouse_genomes_project 2 33367888 33368653 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0052520.1 MGP_LPJ_G0025291.1 mouse_genomes_project 2 11594383 11649232 + MGP_LPJ_P0052520 Tmem236 protein_coding protein_coding MGP_LPJ_T0010412.1 MGP_LPJ_G0008530.1 mouse_genomes_project 2 27935984 27936081 - Mir219a-2 miRNA miRNA MGP_LPJ_T0100600.1 MGP_LPJ_G0038863.1 mouse_genomes_project 2 98927413 98927536 + Gm22957 snoRNA snoRNA MGP_LPJ_T0059467.1 MGP_LPJ_G0026904.1 mouse_genomes_project 2 180737255 180745014 - MGP_LPJ_P0059467 Slmo2 protein_coding protein_coding MGP_LPJ_T0059468.1 MGP_LPJ_G0026904.1 mouse_genomes_project 2 180737863 180745085 - MGP_LPJ_P0059468 Slmo2 protein_coding protein_coding MGP_LPJ_T0059469.1 MGP_LPJ_G0026904.1 mouse_genomes_project 2 180741327 180745042 - Slmo2 protein_coding retained_intron MGP_LPJ_T0059470.1 MGP_LPJ_G0026904.1 mouse_genomes_project 2 180741536 180745082 - MGP_LPJ_P0059470 Slmo2 protein_coding protein_coding MGP_LPJ_T0056515.1 MGP_LPJ_G0026202.1 mouse_genomes_project 2 114143165 114144062 + MGP_LPJ_P0056515 Olfr1289 protein_coding protein_coding MGP_LPJ_T0004116.1 MGP_LPJ_G0003644.1 mouse_genomes_project 2 136545020 136550113 - Gm14097 antisense antisense MGP_LPJ_T0055640.1 MGP_LPJ_G0025923.1 mouse_genomes_project 2 87784154 87785147 + MGP_LPJ_P0055640 Olfr1094 protein_coding protein_coding MGP_LPJ_T0007158.1 MGP_LPJ_G0005876.1 mouse_genomes_project 2 16361445 16364019 - Carlr lincRNA lincRNA MGP_LPJ_T0053389.1 MGP_LPJ_G0025451.1 mouse_genomes_project 2 26453546 26457250 + Ppp1r26 protein_coding processed_transcript MGP_LPJ_T0053390.1 MGP_LPJ_G0025451.1 mouse_genomes_project 2 26453612 26457574 + Ppp1r26 protein_coding processed_transcript MGP_LPJ_T0053391.1 MGP_LPJ_G0025451.1 mouse_genomes_project 2 26454685 26457410 + Ppp1r26 protein_coding processed_transcript MGP_LPJ_T0053392.1 MGP_LPJ_G0025451.1 mouse_genomes_project 2 26454685 26462252 + MGP_LPJ_P0053392 Ppp1r26 protein_coding protein_coding MGP_LPJ_T0053393.1 MGP_LPJ_G0025451.1 mouse_genomes_project 2 26454685 26462249 + MGP_LPJ_P0053393 Ppp1r26 protein_coding protein_coding MGP_LPJ_T0003927.1 MGP_LPJ_G0003514.1 mouse_genomes_project 2 22991055 22993614 - Gm38287 antisense antisense MGP_LPJ_T0058188.1 MGP_LPJ_G0026613.1 mouse_genomes_project 2 157488946 157499818 + MGP_LPJ_P0058188 Cox4i2 protein_coding protein_coding MGP_LPJ_T0058189.1 MGP_LPJ_G0026613.1 mouse_genomes_project 2 157489867 157499815 + MGP_LPJ_P0058189 Cox4i2 protein_coding protein_coding MGP_LPJ_T0003995.1 MGP_LPJ_G0003563.1 mouse_genomes_project 2 61870003 61989145 + Gm13561 antisense antisense MGP_LPJ_T0013588.1 MGP_LPJ_G0011679.1 mouse_genomes_project 2 81055617 81056225 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102016.1 MGP_LPJ_G0040053.1 mouse_genomes_project 2 35608522 35609466 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0055590.1 MGP_LPJ_G0025875.1 mouse_genomes_project 2 86565595 86566525 - MGP_LPJ_P0055590 Olfr1016 protein_coding protein_coding MGP_LPJ_T0056500.1 MGP_LPJ_G0026188.1 mouse_genomes_project 2 113656162 113674272 - MGP_LPJ_P0056500 Gm13941 protein_coding protein_coding MGP_LPJ_T0003899.1 MGP_LPJ_G0003490.1 mouse_genomes_project 2 1483075 1492138 - Gm13175 antisense antisense MGP_LPJ_T0100575.1 MGP_LPJ_G0038838.1 mouse_genomes_project 2 31204031 31204159 + Gm24165 snoRNA snoRNA MGP_LPJ_T0055678.1 MGP_LPJ_G0025953.1 mouse_genomes_project 2 88698668 88699701 + MGP_LPJ_P0055678 Olfr1130 protein_coding protein_coding MGP_LPJ_T0054793.1 MGP_LPJ_G0025696.1 mouse_genomes_project 2 61068576 61146530 + MGP_LPJ_P0054793 Tank protein_coding protein_coding MGP_LPJ_T0054794.1 MGP_LPJ_G0025696.1 mouse_genomes_project 2 61068577 61146530 + MGP_LPJ_P0054794 Tank protein_coding protein_coding MGP_LPJ_T0054795.1 MGP_LPJ_G0025696.1 mouse_genomes_project 2 61068602 61146449 + Tank protein_coding processed_transcript MGP_LPJ_T0054796.1 MGP_LPJ_G0025696.1 mouse_genomes_project 2 61068602 61136255 + Tank protein_coding processed_transcript MGP_LPJ_T0054797.1 MGP_LPJ_G0025696.1 mouse_genomes_project 2 61083737 61146530 + MGP_LPJ_P0054797 Tank protein_coding protein_coding MGP_LPJ_T0054798.1 MGP_LPJ_G0025696.1 mouse_genomes_project 2 61083757 61146530 + MGP_LPJ_P0054798 Tank protein_coding protein_coding MGP_LPJ_T0054799.1 MGP_LPJ_G0025696.1 mouse_genomes_project 2 61083796 61144147 + MGP_LPJ_P0054799 Tank protein_coding protein_coding MGP_LPJ_T0054800.1 MGP_LPJ_G0025696.1 mouse_genomes_project 2 61083824 61106489 + Tank protein_coding processed_transcript MGP_LPJ_T0054801.1 MGP_LPJ_G0025696.1 mouse_genomes_project 2 61083825 61146449 + Tank protein_coding processed_transcript MGP_LPJ_T0054802.1 MGP_LPJ_G0025696.1 mouse_genomes_project 2 61120046 61138538 + Tank protein_coding processed_transcript MGP_LPJ_T0054803.1 MGP_LPJ_G0025696.1 mouse_genomes_project 2 61136178 61142325 + Tank protein_coding processed_transcript MGP_LPJ_T0059228.1 MGP_LPJ_G0026841.1 mouse_genomes_project 2 172759436 172786406 - MGP_LPJ_P0059228 Znfx1 protein_coding protein_coding MGP_LPJ_T0059229.1 MGP_LPJ_G0026841.1 mouse_genomes_project 2 172759442 172767142 - MGP_LPJ_P0059229 Znfx1 protein_coding protein_coding MGP_LPJ_T0059230.1 MGP_LPJ_G0026841.1 mouse_genomes_project 2 172767681 172783815 - MGP_LPJ_P0059230 Znfx1 protein_coding protein_coding MGP_LPJ_T0059231.1 MGP_LPJ_G0026841.1 mouse_genomes_project 2 172767766 172786108 - MGP_LPJ_P0059231 Znfx1 protein_coding protein_coding MGP_LPJ_T0059232.1 MGP_LPJ_G0026841.1 mouse_genomes_project 2 172772901 172786031 - Znfx1 protein_coding retained_intron MGP_LPJ_T0100640.1 MGP_LPJ_G0038903.1 mouse_genomes_project 2 166306592 166306717 + Gm25561 snoRNA snoRNA MGP_LPJ_T0004105.1 MGP_LPJ_G0003638.1 mouse_genomes_project 2 134901684 134913473 + Gm14232 antisense antisense MGP_LPJ_T0007372.1 MGP_LPJ_G0006046.1 mouse_genomes_project 2 155725448 155739229 + lincRNA lincRNA MGP_LPJ_T0007373.1 MGP_LPJ_G0006046.1 mouse_genomes_project 2 155737926 155739214 + lincRNA lincRNA MGP_LPJ_T0059502.1 MGP_LPJ_G0026914.1 mouse_genomes_project 2 186510339 186520866 + MGP_LPJ_P0059502 Lsm14b protein_coding protein_coding MGP_LPJ_T0059503.1 MGP_LPJ_G0026914.1 mouse_genomes_project 2 186510538 186520864 + MGP_LPJ_P0059503 Lsm14b protein_coding protein_coding MGP_LPJ_T0059504.1 MGP_LPJ_G0026914.1 mouse_genomes_project 2 186513258 186519169 + Lsm14b protein_coding processed_transcript MGP_LPJ_T0099332.1 MGP_LPJ_G0037595.1 mouse_genomes_project 2 63006701 63006808 - Gm23503 snRNA snRNA MGP_LPJ_T0007225.1 MGP_LPJ_G0005927.1 mouse_genomes_project 2 61971198 61974909 - Gm13564 lincRNA lincRNA MGP_LPJ_T0057319.1 MGP_LPJ_G0026386.1 mouse_genomes_project 2 130575200 130592352 + Blvra protein_coding retained_intron MGP_LPJ_T0057320.1 MGP_LPJ_G0026386.1 mouse_genomes_project 2 130575202 130601377 + MGP_LPJ_P0057320 Blvra protein_coding protein_coding MGP_LPJ_T0057321.1 MGP_LPJ_G0026386.1 mouse_genomes_project 2 130575214 130594821 + MGP_LPJ_P0057321 Blvra protein_coding protein_coding MGP_LPJ_T0057322.1 MGP_LPJ_G0026386.1 mouse_genomes_project 2 130575228 130591901 + MGP_LPJ_P0057322 Blvra protein_coding protein_coding MGP_LPJ_T0057323.1 MGP_LPJ_G0026386.1 mouse_genomes_project 2 130583960 130596431 + MGP_LPJ_P0057323 Blvra protein_coding protein_coding MGP_LPJ_T0055066.1 MGP_LPJ_G0025749.1 mouse_genomes_project 2 70886544 70987811 - MGP_LPJ_P0055066 Mettl8 protein_coding protein_coding MGP_LPJ_T0055067.1 MGP_LPJ_G0025749.1 mouse_genomes_project 2 70886551 70987839 - MGP_LPJ_P0055067 Mettl8 protein_coding nonsense_mediated_decay MGP_LPJ_T0055068.1 MGP_LPJ_G0025749.1 mouse_genomes_project 2 70886551 70987839 - MGP_LPJ_P0055068 Mettl8 protein_coding protein_coding MGP_LPJ_T0055069.1 MGP_LPJ_G0025749.1 mouse_genomes_project 2 70886551 70987839 - MGP_LPJ_P0055069 Mettl8 protein_coding nonsense_mediated_decay MGP_LPJ_T0055070.1 MGP_LPJ_G0025749.1 mouse_genomes_project 2 70888155 70895379 - MGP_LPJ_P0055070 Mettl8 protein_coding protein_coding MGP_LPJ_T0055071.1 MGP_LPJ_G0025749.1 mouse_genomes_project 2 70888473 70907058 - MGP_LPJ_P0055071 Mettl8 protein_coding nonsense_mediated_decay MGP_LPJ_T0055072.1 MGP_LPJ_G0025749.1 mouse_genomes_project 2 70889040 70899709 - Mettl8 protein_coding retained_intron MGP_LPJ_T0055073.1 MGP_LPJ_G0025749.1 mouse_genomes_project 2 70901973 70987828 - MGP_LPJ_P0055073 Mettl8 protein_coding protein_coding MGP_LPJ_T0055074.1 MGP_LPJ_G0025749.1 mouse_genomes_project 2 70905932 70987839 - Mettl8 protein_coding retained_intron MGP_LPJ_T0055075.1 MGP_LPJ_G0025749.1 mouse_genomes_project 2 70923867 70949100 - Mettl8 protein_coding retained_intron MGP_LPJ_T0058321.1 MGP_LPJ_G0026648.1 mouse_genomes_project 2 159131779 159145242 + protein_coding retained_intron MGP_LPJ_T0058322.1 MGP_LPJ_G0026648.1 mouse_genomes_project 2 159131779 159158028 + MGP_LPJ_P0058322 protein_coding protein_coding MGP_LPJ_T0058324.1 MGP_LPJ_G0026648.1 mouse_genomes_project 2 159144793 159158028 + protein_coding processed_transcript MGP_LPJ_T0057555.1 MGP_LPJ_G0026451.1 mouse_genomes_project 2 134365762 134366505 - Ddrgk1 protein_coding retained_intron MGP_LPJ_T0057556.1 MGP_LPJ_G0026451.1 mouse_genomes_project 2 134365883 134376287 - MGP_LPJ_P0057556 Ddrgk1 protein_coding protein_coding MGP_LPJ_T0057557.1 MGP_LPJ_G0026451.1 mouse_genomes_project 2 134365922 134369079 - Ddrgk1 protein_coding processed_transcript MGP_LPJ_T0057558.1 MGP_LPJ_G0026451.1 mouse_genomes_project 2 134366018 134373463 - MGP_LPJ_P0057558 Ddrgk1 protein_coding nonsense_mediated_decay MGP_LPJ_T0057559.1 MGP_LPJ_G0026451.1 mouse_genomes_project 2 134366926 134375541 - Ddrgk1 protein_coding processed_transcript MGP_LPJ_T0003991.1 MGP_LPJ_G0003561.1 mouse_genomes_project 2 59851264 59852319 + Gm13580 antisense antisense MGP_LPJ_T0056501.1 MGP_LPJ_G0026189.1 mouse_genomes_project 2 113700183 113720519 - MGP_LPJ_P0056501 Gm15130 protein_coding protein_coding MGP_LPJ_T0013645.1 MGP_LPJ_G0011736.1 mouse_genomes_project 2 101960700 101960884 + processed_pseudogene processed_pseudogene MGP_LPJ_T0059511.1 MGP_LPJ_G0026916.1 mouse_genomes_project 2 186527874 186556961 + MGP_LPJ_P0059511 Ss18l1 protein_coding protein_coding MGP_LPJ_T0017708.1 MGP_LPJ_G0015328.1 mouse_genomes_project 2 29367310 29373448 - D330023K18Rik processed_transcript processed_transcript MGP_LPJ_T0017709.1 MGP_LPJ_G0015328.1 mouse_genomes_project 2 29371797 29373448 - D330023K18Rik processed_transcript processed_transcript MGP_LPJ_T0100621.1 MGP_LPJ_G0038884.1 mouse_genomes_project 2 148496763 148496901 - Gm26165 snoRNA snoRNA MGP_LPJ_T0007423.1 MGP_LPJ_G0006089.1 mouse_genomes_project 2 174892762 174893570 - Gm14260 lincRNA lincRNA MGP_LPJ_T0052685.1 MGP_LPJ_G0025320.1 mouse_genomes_project 2 19029016 19491551 + MGP_LPJ_P0052685 Gpr158 protein_coding protein_coding MGP_LPJ_T0052686.1 MGP_LPJ_G0025320.1 mouse_genomes_project 2 19029041 19470345 + Gpr158 protein_coding retained_intron MGP_LPJ_T0052284.1 MGP_LPJ_G0025255.1 mouse_genomes_project 2 2941310 2942165 - Gm13199 protein_coding processed_transcript MGP_LPJ_T0052285.1 MGP_LPJ_G0025255.1 mouse_genomes_project 2 2941311 2942154 - MGP_LPJ_P0052285 Gm13199 protein_coding protein_coding MGP_LPJ_T0053381.1 MGP_LPJ_G0025449.1 mouse_genomes_project 2 26049182 26057690 - MGP_LPJ_P0053381 Fcnb protein_coding protein_coding MGP_LPJ_T0053382.1 MGP_LPJ_G0025449.1 mouse_genomes_project 2 26050903 26057690 - MGP_LPJ_P0053382 Fcnb protein_coding protein_coding MGP_LPJ_T0053383.1 MGP_LPJ_G0025449.1 mouse_genomes_project 2 26052543 26057690 - MGP_LPJ_P0053383 Fcnb protein_coding protein_coding MGP_LPJ_T0098411.1 MGP_LPJ_G0036692.1 mouse_genomes_project 2 109218993 109219117 + Gm22813 scaRNA scaRNA MGP_LPJ_T0003976.1 MGP_LPJ_G0003550.1 mouse_genomes_project 2 36977627 36978587 - Gm27197 antisense antisense MGP_LPJ_T0010359.1 MGP_LPJ_G0008477.1 mouse_genomes_project 2 7727212 7727306 + Mir466f-2 miRNA miRNA MGP_LPJ_T0055818.1 MGP_LPJ_G0026067.1 mouse_genomes_project 2 91666582 91667509 - MGP_LPJ_P0055818 Olfr1272 protein_coding protein_coding MGP_LPJ_T0013533.1 MGP_LPJ_G0011624.1 mouse_genomes_project 2 60042094 60042341 - processed_pseudogene processed_pseudogene MGP_LPJ_T0053379.1 MGP_LPJ_G0025448.1 mouse_genomes_project 2 25849330 26009252 + MGP_LPJ_P0053379 Col5a1 protein_coding protein_coding MGP_LPJ_T0053380.1 MGP_LPJ_G0025448.1 mouse_genomes_project 2 25986525 26006806 + MGP_LPJ_P0053380 Col5a1 protein_coding protein_coding MGP_LPJ_T0013819.1 MGP_LPJ_G0011910.1 mouse_genomes_project 2 171561313 171561910 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055731.1 MGP_LPJ_G0026002.1 mouse_genomes_project 2 89990149 90057206 - MGP_LPJ_P0055731 protein_coding protein_coding MGP_LPJ_T0057849.1 MGP_LPJ_G0026511.1 mouse_genomes_project 2 147256959 147266774 + MGP_LPJ_P0057849 Snrpb2 protein_coding protein_coding MGP_LPJ_T0057850.1 MGP_LPJ_G0026511.1 mouse_genomes_project 2 147256981 147259655 + Snrpb2 protein_coding retained_intron MGP_LPJ_T0057851.1 MGP_LPJ_G0026511.1 mouse_genomes_project 2 147257051 147263345 + MGP_LPJ_P0057851 Snrpb2 protein_coding protein_coding MGP_LPJ_T0057852.1 MGP_LPJ_G0026511.1 mouse_genomes_project 2 147258322 147263345 + Snrpb2 protein_coding retained_intron MGP_LPJ_T0057853.1 MGP_LPJ_G0026511.1 mouse_genomes_project 2 147262093 147266774 + Snrpb2 protein_coding retained_intron MGP_LPJ_T0017688.1 MGP_LPJ_G0015316.1 mouse_genomes_project 2 22189234 22235393 + Gm13415 processed_transcript antisense MGP_LPJ_T0017689.1 MGP_LPJ_G0015316.1 mouse_genomes_project 2 22191651 22214167 + Gm13415 processed_transcript antisense MGP_LPJ_T0017690.1 MGP_LPJ_G0015316.1 mouse_genomes_project 2 22191665 22194081 + Gm13415 processed_transcript retained_intron MGP_LPJ_T0056403.1 MGP_LPJ_G0026168.1 mouse_genomes_project 2 107668536 107681767 - MGP_LPJ_P0056403 Rcn1 protein_coding protein_coding MGP_LPJ_T0056404.1 MGP_LPJ_G0026168.1 mouse_genomes_project 2 107669174 107677801 - Rcn1 protein_coding retained_intron MGP_LPJ_T0058247.1 MGP_LPJ_G0026626.1 mouse_genomes_project 2 157991952 158008281 - MGP_LPJ_P0058247 Plagl2 protein_coding protein_coding MGP_LPJ_T0058248.1 MGP_LPJ_G0026626.1 mouse_genomes_project 2 157991965 158004793 - MGP_LPJ_P0058248 Plagl2 protein_coding protein_coding MGP_LPJ_T0004184.1 MGP_LPJ_G0003697.1 mouse_genomes_project 2 171048758 171056983 + Gm14437 antisense antisense MGP_LPJ_T0055760.1 MGP_LPJ_G0026028.1 mouse_genomes_project 2 90544780 90545752 - MGP_LPJ_P0055760 Olfr1228 protein_coding protein_coding MGP_LPJ_T0004082.1 MGP_LPJ_G0003620.1 mouse_genomes_project 2 121302168 121305413 + 1700054M17Rik antisense antisense MGP_LPJ_T0052903.1 MGP_LPJ_G0025360.1 mouse_genomes_project 2 23049668 23050839 - MGP_LPJ_P0052903 Cysrt1 protein_coding protein_coding MGP_LPJ_T0052904.1 MGP_LPJ_G0025360.1 mouse_genomes_project 2 23049839 23050748 - MGP_LPJ_P0052904 Cysrt1 protein_coding protein_coding MGP_LPJ_T0052905.1 MGP_LPJ_G0025360.1 mouse_genomes_project 2 23050007 23053303 - MGP_LPJ_P0052905 Cysrt1 protein_coding protein_coding MGP_LPJ_T0056225.1 MGP_LPJ_G0026131.1 mouse_genomes_project 2 103749774 103838640 - MGP_LPJ_P0056225 Prr5l protein_coding protein_coding MGP_LPJ_T0056226.1 MGP_LPJ_G0026131.1 mouse_genomes_project 2 103749774 103888800 - MGP_LPJ_P0056226 Prr5l protein_coding protein_coding MGP_LPJ_T0056227.1 MGP_LPJ_G0026131.1 mouse_genomes_project 2 103751729 103838641 - MGP_LPJ_P0056227 Prr5l protein_coding protein_coding MGP_LPJ_T0056228.1 MGP_LPJ_G0026131.1 mouse_genomes_project 2 103752737 103838583 - MGP_LPJ_P0056228 Prr5l protein_coding protein_coding MGP_LPJ_T0056229.1 MGP_LPJ_G0026131.1 mouse_genomes_project 2 103779989 103888800 - MGP_LPJ_P0056229 Prr5l protein_coding protein_coding MGP_LPJ_T0056230.1 MGP_LPJ_G0026131.1 mouse_genomes_project 2 103797009 103933630 - MGP_LPJ_P0056230 Prr5l protein_coding protein_coding MGP_LPJ_T0056231.1 MGP_LPJ_G0026131.1 mouse_genomes_project 2 103810653 103838987 - MGP_LPJ_P0056231 Prr5l protein_coding protein_coding MGP_LPJ_T0056232.1 MGP_LPJ_G0026131.1 mouse_genomes_project 2 103810697 103857167 - MGP_LPJ_P0056232 Prr5l protein_coding protein_coding MGP_LPJ_T0056233.1 MGP_LPJ_G0026131.1 mouse_genomes_project 2 103810808 103838666 - Prr5l protein_coding processed_transcript MGP_LPJ_T0056234.1 MGP_LPJ_G0026131.1 mouse_genomes_project 2 103875707 103933643 - Prr5l protein_coding processed_transcript MGP_LPJ_T0007293.1 MGP_LPJ_G0005982.1 mouse_genomes_project 2 105453240 105488119 - A930006I01Rik lincRNA lincRNA MGP_LPJ_T0054988.1 MGP_LPJ_G0025734.1 mouse_genomes_project 2 69520467 69547384 - MGP_LPJ_P0054988 Fastkd1 protein_coding protein_coding MGP_LPJ_T0054989.1 MGP_LPJ_G0025734.1 mouse_genomes_project 2 69520589 69547236 - MGP_LPJ_P0054989 Fastkd1 protein_coding protein_coding MGP_LPJ_T0054990.1 MGP_LPJ_G0025734.1 mouse_genomes_project 2 69539058 69548282 - Fastkd1 protein_coding retained_intron MGP_LPJ_T0054991.1 MGP_LPJ_G0025734.1 mouse_genomes_project 2 69543726 69548300 - Fastkd1 protein_coding retained_intron MGP_LPJ_T0017727.1 MGP_LPJ_G0015339.1 mouse_genomes_project 2 58763488 58767669 - 5330411J11Rik processed_transcript processed_transcript MGP_LPJ_T0017728.1 MGP_LPJ_G0015339.1 mouse_genomes_project 2 58764779 58768469 - 5330411J11Rik processed_transcript processed_transcript MGP_LPJ_T0001098.1 MGP_LPJ_G0001023.1 mouse_genomes_project 2 34668313 34671485 - TEC TEC MGP_LPJ_T0004119.1 MGP_LPJ_G0003647.1 mouse_genomes_project 2 139215995 139483864 - 9630028H03Rik antisense antisense MGP_LPJ_T0004120.1 MGP_LPJ_G0003647.1 mouse_genomes_project 2 139480809 139483576 - 9630028H03Rik antisense antisense MGP_LPJ_T0056393.1 MGP_LPJ_G0026166.1 mouse_genomes_project 2 107387333 107437463 + MGP_LPJ_P0056393 Wt1 protein_coding protein_coding MGP_LPJ_T0056394.1 MGP_LPJ_G0026166.1 mouse_genomes_project 2 107387800 107436161 + MGP_LPJ_P0056394 Wt1 protein_coding protein_coding MGP_LPJ_T0056395.1 MGP_LPJ_G0026166.1 mouse_genomes_project 2 107387805 107436163 + MGP_LPJ_P0056395 Wt1 protein_coding protein_coding MGP_LPJ_T0056396.1 MGP_LPJ_G0026166.1 mouse_genomes_project 2 107387805 107436084 + MGP_LPJ_P0056396 Wt1 protein_coding protein_coding MGP_LPJ_T0056397.1 MGP_LPJ_G0026166.1 mouse_genomes_project 2 107391702 107396311 + Wt1 protein_coding retained_intron MGP_LPJ_T0056398.1 MGP_LPJ_G0026166.1 mouse_genomes_project 2 107391785 107437463 + MGP_LPJ_P0056398 Wt1 protein_coding protein_coding MGP_LPJ_T0056399.1 MGP_LPJ_G0026166.1 mouse_genomes_project 2 107391785 107437467 + MGP_LPJ_P0056399 Wt1 protein_coding protein_coding MGP_LPJ_T0056400.1 MGP_LPJ_G0026166.1 mouse_genomes_project 2 107426572 107433830 + Wt1 protein_coding retained_intron MGP_LPJ_T0055750.1 MGP_LPJ_G0026019.1 mouse_genomes_project 2 90323738 90324674 - MGP_LPJ_P0055750 Olfr1216 protein_coding protein_coding MGP_LPJ_T0004151.1 MGP_LPJ_G0003673.1 mouse_genomes_project 2 160566648 160571411 + antisense antisense MGP_LPJ_T0004152.1 MGP_LPJ_G0003673.1 mouse_genomes_project 2 160570467 160571397 + antisense antisense MGP_LPJ_T0101523.1 MGP_LPJ_G0039648.1 mouse_genomes_project 2 179799118 179880073 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101524.1 MGP_LPJ_G0039648.1 mouse_genomes_project 2 179800238 179880073 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101525.1 MGP_LPJ_G0039648.1 mouse_genomes_project 2 179800999 179849425 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0101526.1 MGP_LPJ_G0039648.1 mouse_genomes_project 2 179804704 179880073 - transcribed_unprocessed_pseudogene retained_intron MGP_LPJ_T0101527.1 MGP_LPJ_G0039648.1 mouse_genomes_project 2 179805648 179810557 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101528.1 MGP_LPJ_G0039648.1 mouse_genomes_project 2 179806380 179811108 - transcribed_unprocessed_pseudogene retained_intron MGP_LPJ_T0101529.1 MGP_LPJ_G0039648.1 mouse_genomes_project 2 179815896 179880073 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101530.1 MGP_LPJ_G0039648.1 mouse_genomes_project 2 179815896 179879902 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101531.1 MGP_LPJ_G0039648.1 mouse_genomes_project 2 179816923 179828604 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101532.1 MGP_LPJ_G0039648.1 mouse_genomes_project 2 179816937 179880174 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101533.1 MGP_LPJ_G0039648.1 mouse_genomes_project 2 179828265 179880038 - transcribed_unprocessed_pseudogene retained_intron MGP_LPJ_T0101534.1 MGP_LPJ_G0039648.1 mouse_genomes_project 2 179834850 179880069 - transcribed_unprocessed_pseudogene retained_intron MGP_LPJ_T0055506.1 MGP_LPJ_G0025840.1 mouse_genomes_project 2 85253507 85265132 - MGP_LPJ_P0055506 Serping1 protein_coding protein_coding MGP_LPJ_T0055507.1 MGP_LPJ_G0025840.1 mouse_genomes_project 2 85253626 85265172 - MGP_LPJ_P0055507 Serping1 protein_coding protein_coding MGP_LPJ_T0055508.1 MGP_LPJ_G0025840.1 mouse_genomes_project 2 85261889 85263887 - Serping1 protein_coding processed_transcript MGP_LPJ_T0017673.1 MGP_LPJ_G0015308.1 mouse_genomes_project 2 1305410 1320283 - Gm13187 processed_transcript processed_transcript MGP_LPJ_T0017674.1 MGP_LPJ_G0015308.1 mouse_genomes_project 2 1310659 1320338 - Gm13187 processed_transcript processed_transcript MGP_LPJ_T0017675.1 MGP_LPJ_G0015308.1 mouse_genomes_project 2 1319691 1320338 - Gm13187 processed_transcript processed_transcript MGP_LPJ_T0055569.1 MGP_LPJ_G0025863.1 mouse_genomes_project 2 86207732 86209199 - MGP_LPJ_P0055569 Olfr1002 protein_coding protein_coding MGP_LPJ_T0099333.1 MGP_LPJ_G0037596.1 mouse_genomes_project 2 71416198 71416299 - Gm23166 snRNA snRNA MGP_LPJ_T0007306.1 MGP_LPJ_G0005994.1 mouse_genomes_project 2 117663328 117885334 + lincRNA lincRNA MGP_LPJ_T0055809.1 MGP_LPJ_G0026059.1 mouse_genomes_project 2 91386188 91387115 - MGP_LPJ_P0055809 Olfr1264 protein_coding protein_coding MGP_LPJ_T0056380.1 MGP_LPJ_G0026162.1 mouse_genomes_project 2 107073455 107095376 - MGP_LPJ_P0056380 Prrg4 protein_coding protein_coding MGP_LPJ_T0056381.1 MGP_LPJ_G0026162.1 mouse_genomes_project 2 107082444 107094993 - MGP_LPJ_P0056381 Prrg4 protein_coding protein_coding MGP_LPJ_T0056529.1 MGP_LPJ_G0026216.1 mouse_genomes_project 2 114718507 114719443 - MGP_LPJ_P0056529 Olfr1313 protein_coding protein_coding MGP_LPJ_T0056180.1 MGP_LPJ_G0026121.1 mouse_genomes_project 2 95672959 95708968 - MGP_LPJ_P0056180 Gm27027 protein_coding protein_coding MGP_LPJ_T0010377.1 MGP_LPJ_G0008495.1 mouse_genomes_project 2 7783209 7783311 + Gm22925 miRNA miRNA MGP_LPJ_T0001065.1 MGP_LPJ_G0000990.1 mouse_genomes_project 2 9721605 9724657 - TEC TEC MGP_LPJ_T0004086.1 MGP_LPJ_G0003624.1 mouse_genomes_project 2 123138531 123141139 - Gm13999 antisense antisense MGP_LPJ_T0059240.1 MGP_LPJ_G0026844.1 mouse_genomes_project 2 172924570 172977782 - MGP_LPJ_P0059240 Ptgis protein_coding protein_coding MGP_LPJ_T0059241.1 MGP_LPJ_G0026844.1 mouse_genomes_project 2 172935255 172977797 - MGP_LPJ_P0059241 Ptgis protein_coding protein_coding MGP_LPJ_T0059242.1 MGP_LPJ_G0026844.1 mouse_genomes_project 2 172935541 172977613 - MGP_LPJ_P0059242 Ptgis protein_coding unknown_likely_coding MGP_LPJ_T0059243.1 MGP_LPJ_G0026844.1 mouse_genomes_project 2 172938870 172940765 - Ptgis protein_coding retained_intron MGP_LPJ_T0059316.1 MGP_LPJ_G0026862.1 mouse_genomes_project 2 174499576 174621382 - MGP_LPJ_P0059316 Atp9a protein_coding protein_coding MGP_LPJ_T0059317.1 MGP_LPJ_G0026862.1 mouse_genomes_project 2 174499576 174621205 - MGP_LPJ_P0059317 Atp9a protein_coding protein_coding MGP_LPJ_T0059318.1 MGP_LPJ_G0026862.1 mouse_genomes_project 2 174499576 174621043 - MGP_LPJ_P0059318 Atp9a protein_coding protein_coding MGP_LPJ_T0059319.1 MGP_LPJ_G0026862.1 mouse_genomes_project 2 174499576 174611835 - MGP_LPJ_P0059319 Atp9a protein_coding protein_coding MGP_LPJ_T0059320.1 MGP_LPJ_G0026862.1 mouse_genomes_project 2 174499601 174621207 - MGP_LPJ_P0059320 Atp9a protein_coding protein_coding MGP_LPJ_T0059321.1 MGP_LPJ_G0026862.1 mouse_genomes_project 2 174526801 174537129 - Atp9a protein_coding processed_transcript MGP_LPJ_T0059322.1 MGP_LPJ_G0026862.1 mouse_genomes_project 2 174533834 174621043 - Atp9a protein_coding retained_intron MGP_LPJ_T0059323.1 MGP_LPJ_G0026862.1 mouse_genomes_project 2 174562198 174621624 - MGP_LPJ_P0059323 Atp9a protein_coding protein_coding MGP_LPJ_T0059324.1 MGP_LPJ_G0026862.1 mouse_genomes_project 2 174562206 174621658 - MGP_LPJ_P0059324 Atp9a protein_coding protein_coding MGP_LPJ_T0059325.1 MGP_LPJ_G0026862.1 mouse_genomes_project 2 174579817 174589852 - MGP_LPJ_P0059325 Atp9a protein_coding protein_coding MGP_LPJ_T0059326.1 MGP_LPJ_G0026862.1 mouse_genomes_project 2 174579884 174589901 - MGP_LPJ_P0059326 Atp9a protein_coding protein_coding MGP_LPJ_T0004142.1 MGP_LPJ_G0003664.1 mouse_genomes_project 2 156540427 156542069 - Rspo4os antisense antisense MGP_LPJ_T0053059.1 MGP_LPJ_G0025386.1 mouse_genomes_project 2 23401165 23409388 - MGP_LPJ_P0053059 Mamdc4 protein_coding protein_coding MGP_LPJ_T0053060.1 MGP_LPJ_G0025386.1 mouse_genomes_project 2 23401187 23409430 - MGP_LPJ_P0053060 Mamdc4 protein_coding protein_coding MGP_LPJ_T0053061.1 MGP_LPJ_G0025386.1 mouse_genomes_project 2 23401360 23408326 - MGP_LPJ_P0053061 Mamdc4 protein_coding protein_coding MGP_LPJ_T0053062.1 MGP_LPJ_G0025386.1 mouse_genomes_project 2 23406529 23407557 - Mamdc4 protein_coding processed_transcript MGP_LPJ_T0053063.1 MGP_LPJ_G0025386.1 mouse_genomes_project 2 23406573 23407187 - Mamdc4 protein_coding processed_transcript MGP_LPJ_T0053064.1 MGP_LPJ_G0025386.1 mouse_genomes_project 2 23408245 23415084 - Mamdc4 protein_coding processed_transcript MGP_LPJ_T0057818.1 MGP_LPJ_G0026504.1 mouse_genomes_project 2 144194683 144247816 - MGP_LPJ_P0057818 Esf1 protein_coding protein_coding MGP_LPJ_T0057819.1 MGP_LPJ_G0026504.1 mouse_genomes_project 2 144225072 144232025 - Esf1 protein_coding retained_intron MGP_LPJ_T0057821.1 MGP_LPJ_G0026504.1 mouse_genomes_project 2 144233605 144237748 - Esf1 protein_coding retained_intron MGP_LPJ_T0057822.1 MGP_LPJ_G0026504.1 mouse_genomes_project 2 144233640 144235562 - Esf1 protein_coding retained_intron MGP_LPJ_T0057823.1 MGP_LPJ_G0026504.1 mouse_genomes_project 2 144236627 144237748 - Esf1 protein_coding retained_intron MGP_LPJ_T0053208.1 MGP_LPJ_G0025418.1 mouse_genomes_project 2 24283636 24291420 + MGP_LPJ_P0053208 Pmpca protein_coding protein_coding MGP_LPJ_T0053209.1 MGP_LPJ_G0025418.1 mouse_genomes_project 2 24283645 24288239 + MGP_LPJ_P0053209 Pmpca protein_coding protein_coding MGP_LPJ_T0053210.1 MGP_LPJ_G0025418.1 mouse_genomes_project 2 24283651 24284593 + Pmpca protein_coding processed_transcript MGP_LPJ_T0053211.1 MGP_LPJ_G0025418.1 mouse_genomes_project 2 24283651 24284500 + Pmpca protein_coding processed_transcript MGP_LPJ_T0053212.1 MGP_LPJ_G0025418.1 mouse_genomes_project 2 24283653 24286264 + Pmpca protein_coding processed_transcript MGP_LPJ_T0053213.1 MGP_LPJ_G0025418.1 mouse_genomes_project 2 24285224 24286696 + Pmpca protein_coding processed_transcript MGP_LPJ_T0001123.1 MGP_LPJ_G0001048.1 mouse_genomes_project 2 97641005 97661769 + TEC TEC MGP_LPJ_T0057389.1 MGP_LPJ_G0026403.1 mouse_genomes_project 2 131171226 131197377 - MGP_LPJ_P0057389 Mal protein_coding protein_coding MGP_LPJ_T0057390.1 MGP_LPJ_G0026403.1 mouse_genomes_project 2 131172874 131196901 - MGP_LPJ_P0057390 Mal protein_coding protein_coding MGP_LPJ_T0057683.1 MGP_LPJ_G0026474.1 mouse_genomes_project 2 135714332 135719627 + MGP_LPJ_P0057683 Prnd protein_coding protein_coding MGP_LPJ_T0057684.1 MGP_LPJ_G0026474.1 mouse_genomes_project 2 135714333 135719627 + MGP_LPJ_P0057684 Prnd protein_coding protein_coding MGP_LPJ_T0057685.1 MGP_LPJ_G0026474.1 mouse_genomes_project 2 135714333 135719627 + MGP_LPJ_P0057685 Prnd protein_coding protein_coding MGP_LPJ_T0057686.1 MGP_LPJ_G0026474.1 mouse_genomes_project 2 135714508 135719627 + MGP_LPJ_P0057686 Prnd protein_coding protein_coding MGP_LPJ_T0001125.1 MGP_LPJ_G0001050.1 mouse_genomes_project 2 118947917 118948853 - TEC TEC MGP_LPJ_T0058317.1 MGP_LPJ_G0026646.1 mouse_genomes_project 2 159005175 159035126 + MGP_LPJ_P0058317 Bpifb1 protein_coding protein_coding MGP_LPJ_T0058318.1 MGP_LPJ_G0026646.1 mouse_genomes_project 2 159005180 159035099 + Bpifb1 protein_coding retained_intron MGP_LPJ_T0058319.1 MGP_LPJ_G0026646.1 mouse_genomes_project 2 159015215 159035100 + MGP_LPJ_P0058319 Bpifb1 protein_coding protein_coding MGP_LPJ_T0013718.1 MGP_LPJ_G0011809.1 mouse_genomes_project 2 133779503 133780823 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013616.1 MGP_LPJ_G0011707.1 mouse_genomes_project 2 88587806 88588216 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055567.1 MGP_LPJ_G0025861.1 mouse_genomes_project 2 86141788 86142733 + MGP_LPJ_P0055567 Olfr998 protein_coding protein_coding MGP_LPJ_T0017712.1 MGP_LPJ_G0015330.1 mouse_genomes_project 2 33451181 33456083 + Gm13448 processed_transcript processed_transcript MGP_LPJ_T0056521.1 MGP_LPJ_G0026208.1 mouse_genomes_project 2 114408866 114409805 + MGP_LPJ_P0056521 Olfr1301 protein_coding protein_coding MGP_LPJ_T0013492.1 MGP_LPJ_G0011583.1 mouse_genomes_project 2 48797255 48797733 + processed_pseudogene processed_pseudogene MGP_LPJ_T0055596.1 MGP_LPJ_G0025881.1 mouse_genomes_project 2 86680976 86681960 - MGP_LPJ_P0055596 Olfr1024 protein_coding protein_coding MGP_LPJ_T0059358.1 MGP_LPJ_G0026869.1 mouse_genomes_project 2 176482119 176499114 - MGP_LPJ_P0059358 Cyp24a1 protein_coding protein_coding MGP_LPJ_T0054081.1 MGP_LPJ_G0025557.1 mouse_genomes_project 2 31254440 31307207 + MGP_LPJ_P0054081 Fam129b protein_coding protein_coding MGP_LPJ_T0054082.1 MGP_LPJ_G0025557.1 mouse_genomes_project 2 31277273 31291834 + MGP_LPJ_P0054082 Fam129b protein_coding protein_coding MGP_LPJ_T0054083.1 MGP_LPJ_G0025557.1 mouse_genomes_project 2 31292783 31294463 + Fam129b protein_coding retained_intron MGP_LPJ_T0054084.1 MGP_LPJ_G0025557.1 mouse_genomes_project 2 31296663 31302977 + Fam129b protein_coding processed_transcript MGP_LPJ_T0054085.1 MGP_LPJ_G0025557.1 mouse_genomes_project 2 31300593 31304060 + Fam129b protein_coding processed_transcript MGP_LPJ_T0054086.1 MGP_LPJ_G0025557.1 mouse_genomes_project 2 31303594 31305592 + Fam129b protein_coding processed_transcript MGP_LPJ_T0056599.1 MGP_LPJ_G0026241.1 mouse_genomes_project 2 118442292 118648130 + MGP_LPJ_P0056599 BC052040 protein_coding protein_coding MGP_LPJ_T0056600.1 MGP_LPJ_G0026241.1 mouse_genomes_project 2 118442309 118648130 + MGP_LPJ_P0056600 BC052040 protein_coding protein_coding MGP_LPJ_T0056601.1 MGP_LPJ_G0026241.1 mouse_genomes_project 2 118442377 118501025 + BC052040 protein_coding processed_transcript MGP_LPJ_T0102045.1 MGP_LPJ_G0040082.1 mouse_genomes_project 2 88962936 88963873 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0057069.1 MGP_LPJ_G0026326.1 mouse_genomes_project 2 124538639 124561294 - MGP_LPJ_P0057069 Catsper2 protein_coding nonsense_mediated_decay MGP_LPJ_T0057070.1 MGP_LPJ_G0026326.1 mouse_genomes_project 2 124540365 124561477 - MGP_LPJ_P0057070 Catsper2 protein_coding protein_coding MGP_LPJ_T0057071.1 MGP_LPJ_G0026326.1 mouse_genomes_project 2 124540367 124543271 - Catsper2 protein_coding retained_intron MGP_LPJ_T0057072.1 MGP_LPJ_G0026326.1 mouse_genomes_project 2 124540466 124561452 - MGP_LPJ_P0057072 Catsper2 protein_coding unknown_likely_coding MGP_LPJ_T0057073.1 MGP_LPJ_G0026326.1 mouse_genomes_project 2 124557882 124559941 - Catsper2 protein_coding retained_intron MGP_LPJ_T0057532.1 MGP_LPJ_G0026443.1 mouse_genomes_project 2 134135346 134149385 + Vps16 protein_coding retained_intron MGP_LPJ_T0057533.1 MGP_LPJ_G0026443.1 mouse_genomes_project 2 134135372 134155201 + MGP_LPJ_P0057533 Vps16 protein_coding protein_coding MGP_LPJ_T0057534.1 MGP_LPJ_G0026443.1 mouse_genomes_project 2 134135372 134150849 + MGP_LPJ_P0057534 Vps16 protein_coding protein_coding MGP_LPJ_T0057535.1 MGP_LPJ_G0026443.1 mouse_genomes_project 2 134135411 134151228 + Vps16 protein_coding processed_transcript MGP_LPJ_T0057536.1 MGP_LPJ_G0026443.1 mouse_genomes_project 2 134148567 134149999 + Vps16 protein_coding retained_intron MGP_LPJ_T0057537.1 MGP_LPJ_G0026443.1 mouse_genomes_project 2 134150561 134152637 + Vps16 protein_coding retained_intron MGP_LPJ_T0057538.1 MGP_LPJ_G0026443.1 mouse_genomes_project 2 134151253 134152239 + Vps16 protein_coding retained_intron MGP_LPJ_T0057539.1 MGP_LPJ_G0026443.1 mouse_genomes_project 2 134152539 134154331 + Vps16 protein_coding retained_intron MGP_LPJ_T0057540.1 MGP_LPJ_G0026443.1 mouse_genomes_project 2 134154098 134154666 + Vps16 protein_coding retained_intron MGP_LPJ_T0059620.1 MGP_LPJ_G0026940.1 mouse_genomes_project 2 187569735 187600646 + MGP_LPJ_P0059620 Col20a1 protein_coding protein_coding MGP_LPJ_T0059621.1 MGP_LPJ_G0026940.1 mouse_genomes_project 2 187569735 187601858 + MGP_LPJ_P0059621 Col20a1 protein_coding protein_coding MGP_LPJ_T0059622.1 MGP_LPJ_G0026940.1 mouse_genomes_project 2 187572318 187601863 + MGP_LPJ_P0059622 Col20a1 protein_coding unknown_likely_coding MGP_LPJ_T0059623.1 MGP_LPJ_G0026940.1 mouse_genomes_project 2 187584534 187587611 + MGP_LPJ_P0059623 Col20a1 protein_coding nonsense_mediated_decay MGP_LPJ_T0059624.1 MGP_LPJ_G0026940.1 mouse_genomes_project 2 187597501 187601858 + MGP_LPJ_P0059624 Col20a1 protein_coding protein_coding MGP_LPJ_T0057370.1 MGP_LPJ_G0026399.1 mouse_genomes_project 2 130976692 131056585 - MGP_LPJ_P0057370 Kcnip3 protein_coding protein_coding MGP_LPJ_T0057371.1 MGP_LPJ_G0026399.1 mouse_genomes_project 2 130976692 131056585 - MGP_LPJ_P0057371 Kcnip3 protein_coding protein_coding MGP_LPJ_T0057372.1 MGP_LPJ_G0026399.1 mouse_genomes_project 2 130978322 131013224 - MGP_LPJ_P0057372 Kcnip3 protein_coding protein_coding MGP_LPJ_T0057373.1 MGP_LPJ_G0026399.1 mouse_genomes_project 2 130978424 131057309 - Kcnip3 protein_coding processed_transcript MGP_LPJ_T0054615.1 MGP_LPJ_G0025664.1 mouse_genomes_project 2 51335626 51546073 - MGP_LPJ_P0054615 Neb protein_coding protein_coding MGP_LPJ_T0054616.1 MGP_LPJ_G0025664.1 mouse_genomes_project 2 51335641 51425588 - MGP_LPJ_P0054616 Neb protein_coding protein_coding MGP_LPJ_T0054617.1 MGP_LPJ_G0025664.1 mouse_genomes_project 2 51335641 51542409 - MGP_LPJ_P0054617 Neb protein_coding protein_coding MGP_LPJ_T0054618.1 MGP_LPJ_G0025664.1 mouse_genomes_project 2 51336096 51357754 - Neb protein_coding processed_transcript MGP_LPJ_T0054619.1 MGP_LPJ_G0025664.1 mouse_genomes_project 2 51336237 51541756 - MGP_LPJ_P0054619 Neb protein_coding unknown_likely_coding MGP_LPJ_T0054620.1 MGP_LPJ_G0025664.1 mouse_genomes_project 2 51336240 51378609 - MGP_LPJ_P0054620 Neb protein_coding protein_coding MGP_LPJ_T0054621.1 MGP_LPJ_G0025664.1 mouse_genomes_project 2 51356182 51362907 - Neb protein_coding processed_transcript MGP_LPJ_T0054622.1 MGP_LPJ_G0025664.1 mouse_genomes_project 2 51375553 51378032 - Neb protein_coding processed_transcript MGP_LPJ_T0054623.1 MGP_LPJ_G0025664.1 mouse_genomes_project 2 51380040 51394335 - MGP_LPJ_P0054623 Neb protein_coding protein_coding MGP_LPJ_T0054624.1 MGP_LPJ_G0025664.1 mouse_genomes_project 2 51423632 51459257 - MGP_LPJ_P0054624 Neb protein_coding protein_coding MGP_LPJ_T0054625.1 MGP_LPJ_G0025664.1 mouse_genomes_project 2 51526906 51543037 - Neb protein_coding processed_transcript MGP_LPJ_T0054626.1 MGP_LPJ_G0025664.1 mouse_genomes_project 2 51536117 51546073 - Neb protein_coding processed_transcript MGP_LPJ_T0102003.1 MGP_LPJ_G0040040.1 mouse_genomes_project 2 9250951 9262437 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0053280.1 MGP_LPJ_G0025430.1 mouse_genomes_project 2 24826565 24830606 + MGP_LPJ_P0053280 Rpl7a protein_coding protein_coding MGP_LPJ_T0053281.1 MGP_LPJ_G0025430.1 mouse_genomes_project 2 24826618 24830345 + Rpl7a protein_coding processed_transcript MGP_LPJ_T0053282.1 MGP_LPJ_G0025430.1 mouse_genomes_project 2 24826622 24830606 + Rpl7a protein_coding processed_transcript MGP_LPJ_T0053283.1 MGP_LPJ_G0025430.1 mouse_genomes_project 2 24826807 24830606 + Rpl7a protein_coding processed_transcript MGP_LPJ_T0053284.1 MGP_LPJ_G0025430.1 mouse_genomes_project 2 24827993 24830606 + Rpl7a protein_coding processed_transcript MGP_LPJ_T0053285.1 MGP_LPJ_G0025430.1 mouse_genomes_project 2 24828420 24830606 + Rpl7a protein_coding processed_transcript MGP_LPJ_T0053286.1 MGP_LPJ_G0025430.1 mouse_genomes_project 2 24828472 24830500 + Rpl7a protein_coding processed_transcript MGP_LPJ_T0057264.1 MGP_LPJ_G0026376.1 mouse_genomes_project 2 129596147 129617708 + MGP_LPJ_P0057264 Dtwd1 protein_coding protein_coding MGP_LPJ_T0057265.1 MGP_LPJ_G0026376.1 mouse_genomes_project 2 129598544 129617711 + MGP_LPJ_P0057265 Dtwd1 protein_coding protein_coding MGP_LPJ_T0053109.1 MGP_LPJ_G0025404.1 mouse_genomes_project 2 23706294 23710548 - MGP_LPJ_P0053109 Sohlh1 protein_coding protein_coding MGP_LPJ_T0101520.1 MGP_LPJ_G0039645.1 mouse_genomes_project 2 37316610 37334669 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0007362.1 MGP_LPJ_G0006039.1 mouse_genomes_project 2 152137482 152147064 + A530006G24Rik lincRNA lincRNA MGP_LPJ_T0056687.1 MGP_LPJ_G0026260.1 mouse_genomes_project 2 121848042 121871191 + MGP_LPJ_P0056687 Knstrn protein_coding protein_coding MGP_LPJ_T0056688.1 MGP_LPJ_G0026260.1 mouse_genomes_project 2 121848271 121867671 + MGP_LPJ_P0056688 Knstrn protein_coding nonsense_mediated_decay MGP_LPJ_T0056689.1 MGP_LPJ_G0026260.1 mouse_genomes_project 2 121848271 121867739 + MGP_LPJ_P0056689 Knstrn protein_coding nonsense_mediated_decay MGP_LPJ_T0056690.1 MGP_LPJ_G0026260.1 mouse_genomes_project 2 121848272 121867648 + MGP_LPJ_P0056690 Knstrn protein_coding protein_coding MGP_LPJ_T0056691.1 MGP_LPJ_G0026260.1 mouse_genomes_project 2 121848293 121868132 + MGP_LPJ_P0056691 Knstrn protein_coding protein_coding MGP_LPJ_T0056692.1 MGP_LPJ_G0026260.1 mouse_genomes_project 2 121848316 121864530 + MGP_LPJ_P0056692 Knstrn protein_coding protein_coding MGP_LPJ_T0056693.1 MGP_LPJ_G0026260.1 mouse_genomes_project 2 121848335 121867558 + MGP_LPJ_P0056693 Knstrn protein_coding nonsense_mediated_decay MGP_LPJ_T0056694.1 MGP_LPJ_G0026260.1 mouse_genomes_project 2 121865127 121870638 + MGP_LPJ_P0056694 Knstrn protein_coding nonsense_mediated_decay MGP_LPJ_T0056695.1 MGP_LPJ_G0026260.1 mouse_genomes_project 2 121867564 121888959 + MGP_LPJ_P0056695 Knstrn protein_coding nonsense_mediated_decay MGP_LPJ_T0004047.1 MGP_LPJ_G0003599.1 mouse_genomes_project 2 86349485 86353034 + Gm27221 antisense antisense MGP_LPJ_T0056202.1 MGP_LPJ_G0026125.1 mouse_genomes_project 2 96157715 96182987 - MGP_LPJ_P0056202 Api5 protein_coding protein_coding MGP_LPJ_T0056203.1 MGP_LPJ_G0026125.1 mouse_genomes_project 2 96162273 96182963 - Api5 protein_coding processed_transcript MGP_LPJ_T0056204.1 MGP_LPJ_G0026125.1 mouse_genomes_project 2 96167316 96183131 - Api5 protein_coding retained_intron MGP_LPJ_T0056205.1 MGP_LPJ_G0026125.1 mouse_genomes_project 2 96172049 96176981 - Api5 protein_coding processed_transcript MGP_LPJ_T0007286.1 MGP_LPJ_G0005977.1 mouse_genomes_project 2 98808094 98892963 - 4930445B16Rik lincRNA lincRNA MGP_LPJ_T0059405.1 MGP_LPJ_G0026888.1 mouse_genomes_project 2 179341780 179347975 + MGP_LPJ_P0059405 Pck1 protein_coding protein_coding MGP_LPJ_T0059406.1 MGP_LPJ_G0026888.1 mouse_genomes_project 2 179341805 179343542 + Pck1 protein_coding processed_transcript MGP_LPJ_T0059407.1 MGP_LPJ_G0026888.1 mouse_genomes_project 2 179341805 179343192 + Pck1 protein_coding retained_intron MGP_LPJ_T0059408.1 MGP_LPJ_G0026888.1 mouse_genomes_project 2 179341814 179347973 + Pck1 protein_coding retained_intron MGP_LPJ_T0058670.1 MGP_LPJ_G0026709.1 mouse_genomes_project 2 161959126 162056142 - MGP_LPJ_P0058670 Ndrg3 protein_coding protein_coding MGP_LPJ_T0058671.1 MGP_LPJ_G0026709.1 mouse_genomes_project 2 161959127 162056098 - MGP_LPJ_P0058671 Ndrg3 protein_coding protein_coding MGP_LPJ_T0058672.1 MGP_LPJ_G0026709.1 mouse_genomes_project 2 161960185 161993748 - Ndrg3 protein_coding processed_transcript MGP_LPJ_T0058673.1 MGP_LPJ_G0026709.1 mouse_genomes_project 2 161962934 161971973 - Ndrg3 protein_coding processed_transcript MGP_LPJ_T0058674.1 MGP_LPJ_G0026709.1 mouse_genomes_project 2 161971265 162056090 - MGP_LPJ_P0058674 Ndrg3 protein_coding protein_coding MGP_LPJ_T0058675.1 MGP_LPJ_G0026709.1 mouse_genomes_project 2 161980594 162006818 - Ndrg3 protein_coding processed_transcript MGP_LPJ_T0058676.1 MGP_LPJ_G0026709.1 mouse_genomes_project 2 161996011 162056055 - Ndrg3 protein_coding processed_transcript MGP_LPJ_T0058677.1 MGP_LPJ_G0026709.1 mouse_genomes_project 2 162001687 162055982 - Ndrg3 protein_coding processed_transcript MGP_LPJ_T0058678.1 MGP_LPJ_G0026709.1 mouse_genomes_project 2 162009781 162056102 - Ndrg3 protein_coding retained_intron MGP_LPJ_T0058679.1 MGP_LPJ_G0026709.1 mouse_genomes_project 2 162023570 162056051 - Ndrg3 protein_coding processed_transcript MGP_LPJ_T0058476.1 MGP_LPJ_G0026683.1 mouse_genomes_project 2 160815218 160822495 - MGP_LPJ_P0058476 Fam83c protein_coding protein_coding MGP_LPJ_T0099336.1 MGP_LPJ_G0037599.1 mouse_genomes_project 2 75905444 75905543 - Gm24996 snRNA snRNA MGP_LPJ_T0054950.1 MGP_LPJ_G0025725.1 mouse_genomes_project 2 68644154 68906341 + MGP_LPJ_P0054950 Cers6 protein_coding protein_coding MGP_LPJ_T0054951.1 MGP_LPJ_G0025725.1 mouse_genomes_project 2 68644155 68645438 + Cers6 protein_coding retained_intron MGP_LPJ_T0054952.1 MGP_LPJ_G0025725.1 mouse_genomes_project 2 68644163 68861305 + Cers6 protein_coding retained_intron MGP_LPJ_T0054953.1 MGP_LPJ_G0025725.1 mouse_genomes_project 2 68644183 68721290 + Cers6 protein_coding retained_intron MGP_LPJ_T0054954.1 MGP_LPJ_G0025725.1 mouse_genomes_project 2 68644299 68900651 + MGP_LPJ_P0054954 Cers6 protein_coding protein_coding MGP_LPJ_T0054955.1 MGP_LPJ_G0025725.1 mouse_genomes_project 2 68733410 68840753 + Cers6 protein_coding retained_intron MGP_LPJ_T0054956.1 MGP_LPJ_G0025725.1 mouse_genomes_project 2 68746057 68841109 + Cers6 protein_coding retained_intron MGP_LPJ_T0099337.1 MGP_LPJ_G0037600.1 mouse_genomes_project 2 79735922 79736025 + Gm22606 snRNA snRNA MGP_LPJ_T0003981.1 MGP_LPJ_G0003554.1 mouse_genomes_project 2 37671144 37672690 - Gm13496 antisense antisense MGP_LPJ_T0057436.1 MGP_LPJ_G0026415.1 mouse_genomes_project 2 132452069 132491198 + MGP_LPJ_P0057436 Fbln7 protein_coding protein_coding MGP_LPJ_T0057437.1 MGP_LPJ_G0026415.1 mouse_genomes_project 2 132453022 132491194 + MGP_LPJ_P0057437 Fbln7 protein_coding protein_coding MGP_LPJ_T0007398.1 MGP_LPJ_G0006068.1 mouse_genomes_project 2 168602047 168606482 - Gm14254 lincRNA lincRNA MGP_LPJ_T0007449.1 MGP_LPJ_G0006112.1 mouse_genomes_project 2 187393885 187462198 - Gm14342 lincRNA lincRNA MGP_LPJ_T0057586.1 MGP_LPJ_G0026455.1 mouse_genomes_project 2 134640164 134772535 + MGP_LPJ_P0057586 Atrn protein_coding protein_coding MGP_LPJ_T0057587.1 MGP_LPJ_G0026455.1 mouse_genomes_project 2 134640170 134744642 + Atrn protein_coding retained_intron MGP_LPJ_T0057588.1 MGP_LPJ_G0026455.1 mouse_genomes_project 2 134640600 134672016 + Atrn protein_coding retained_intron MGP_LPJ_T0057589.1 MGP_LPJ_G0026455.1 mouse_genomes_project 2 134720311 134733822 + Atrn protein_coding retained_intron MGP_LPJ_T0057590.1 MGP_LPJ_G0026455.1 mouse_genomes_project 2 134735415 134744670 + Atrn protein_coding retained_intron MGP_LPJ_T0004088.1 MGP_LPJ_G0003626.1 mouse_genomes_project 2 125078009 125078947 - Gm14019 antisense antisense MGP_LPJ_T0057226.1 MGP_LPJ_G0026365.1 mouse_genomes_project 2 128660319 128672552 + MGP_LPJ_P0057226 Dut protein_coding protein_coding MGP_LPJ_T0057227.1 MGP_LPJ_G0026365.1 mouse_genomes_project 2 128660611 128673412 + MGP_LPJ_P0057227 Dut protein_coding protein_coding MGP_LPJ_T0057228.1 MGP_LPJ_G0026365.1 mouse_genomes_project 2 128661029 128662143 + Dut protein_coding processed_transcript MGP_LPJ_T0010484.1 MGP_LPJ_G0008602.1 mouse_genomes_project 2 142829936 142830015 + Mir1952 miRNA miRNA MGP_LPJ_T0013785.1 MGP_LPJ_G0011876.1 mouse_genomes_project 2 158205620 158205902 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102035.1 MGP_LPJ_G0040072.1 mouse_genomes_project 2 87338022 87338965 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0055610.1 MGP_LPJ_G0025894.1 mouse_genomes_project 2 86937839 86938784 - MGP_LPJ_P0055610 Olfr1043 protein_coding protein_coding MGP_LPJ_T0017771.1 MGP_LPJ_G0015366.1 mouse_genomes_project 2 109047352 109047827 - BB218582 processed_transcript processed_transcript MGP_LPJ_T0017772.1 MGP_LPJ_G0015366.1 mouse_genomes_project 2 109047355 109054803 - BB218582 processed_transcript processed_transcript MGP_LPJ_T0017773.1 MGP_LPJ_G0015366.1 mouse_genomes_project 2 109051648 109054773 - BB218582 processed_transcript processed_transcript MGP_LPJ_T0055734.1 MGP_LPJ_G0026005.1 mouse_genomes_project 2 90056195 90057206 - MGP_LPJ_P0055734 Olfr1200 protein_coding protein_coding MGP_LPJ_T0053884.1 MGP_LPJ_G0025528.1 mouse_genomes_project 2 30457853 30543926 + MGP_LPJ_P0053884 Prrc2b protein_coding protein_coding MGP_LPJ_T0053885.1 MGP_LPJ_G0025528.1 mouse_genomes_project 2 30457919 30543911 + MGP_LPJ_P0053885 Prrc2b protein_coding protein_coding MGP_LPJ_T0053886.1 MGP_LPJ_G0025528.1 mouse_genomes_project 2 30491293 30540551 + MGP_LPJ_P0053886 Prrc2b protein_coding protein_coding MGP_LPJ_T0053887.1 MGP_LPJ_G0025528.1 mouse_genomes_project 2 30514943 30528223 + Prrc2b protein_coding processed_transcript MGP_LPJ_T0053888.1 MGP_LPJ_G0025528.1 mouse_genomes_project 2 30520762 30527882 + MGP_LPJ_P0053888 Prrc2b protein_coding protein_coding MGP_LPJ_T0053889.1 MGP_LPJ_G0025528.1 mouse_genomes_project 2 30524642 30528177 + MGP_LPJ_P0053889 Prrc2b protein_coding protein_coding MGP_LPJ_T0053890.1 MGP_LPJ_G0025528.1 mouse_genomes_project 2 30525776 30527721 + Prrc2b protein_coding processed_transcript MGP_LPJ_T0053891.1 MGP_LPJ_G0025528.1 mouse_genomes_project 2 30525844 30529932 + Prrc2b protein_coding processed_transcript MGP_LPJ_T0053892.1 MGP_LPJ_G0025528.1 mouse_genomes_project 2 30528094 30530884 + Prrc2b protein_coding processed_transcript MGP_LPJ_T0053893.1 MGP_LPJ_G0025528.1 mouse_genomes_project 2 30528332 30530000 + Prrc2b protein_coding processed_transcript MGP_LPJ_T0003944.1 MGP_LPJ_G0003523.1 mouse_genomes_project 2 24954580 24958136 + Gm13398 antisense antisense MGP_LPJ_T0056431.1 MGP_LPJ_G0026170.1 mouse_genomes_project 2 108007843 108254341 - MGP_LPJ_P0056431 Elp4 protein_coding protein_coding MGP_LPJ_T0056432.1 MGP_LPJ_G0026170.1 mouse_genomes_project 2 108038819 108201823 - MGP_LPJ_P0056432 Elp4 protein_coding protein_coding MGP_LPJ_T0056433.1 MGP_LPJ_G0026170.1 mouse_genomes_project 2 108107082 108130416 - Elp4 protein_coding retained_intron MGP_LPJ_T0056434.1 MGP_LPJ_G0026170.1 mouse_genomes_project 2 108201910 108254260 - Elp4 protein_coding processed_transcript MGP_LPJ_T0056504.1 MGP_LPJ_G0026191.1 mouse_genomes_project 2 113797253 113798192 - MGP_LPJ_P0056504 Olfr1275 protein_coding protein_coding MGP_LPJ_T0013552.1 MGP_LPJ_G0011643.1 mouse_genomes_project 2 69606682 69607307 + processed_pseudogene processed_pseudogene MGP_LPJ_T0059778.1 MGP_LPJ_G0026965.1 mouse_genomes_project 2 188320530 188327606 + Tcea2 protein_coding retained_intron MGP_LPJ_T0059779.1 MGP_LPJ_G0026965.1 mouse_genomes_project 2 188320530 188328330 + MGP_LPJ_P0059779 Tcea2 protein_coding protein_coding MGP_LPJ_T0059780.1 MGP_LPJ_G0026965.1 mouse_genomes_project 2 188320569 188326676 + MGP_LPJ_P0059780 Tcea2 protein_coding unknown_likely_coding MGP_LPJ_T0059781.1 MGP_LPJ_G0026965.1 mouse_genomes_project 2 188321410 188328310 + MGP_LPJ_P0059781 Tcea2 protein_coding protein_coding MGP_LPJ_T0059782.1 MGP_LPJ_G0026965.1 mouse_genomes_project 2 188323105 188328304 + MGP_LPJ_P0059782 Tcea2 protein_coding protein_coding MGP_LPJ_T0059783.1 MGP_LPJ_G0026965.1 mouse_genomes_project 2 188323386 188326551 + Tcea2 protein_coding processed_transcript MGP_LPJ_T0059784.1 MGP_LPJ_G0026965.1 mouse_genomes_project 2 188323795 188328170 + Tcea2 protein_coding retained_intron MGP_LPJ_T0059785.1 MGP_LPJ_G0026965.1 mouse_genomes_project 2 188323821 188327193 + Tcea2 protein_coding retained_intron MGP_LPJ_T0059786.1 MGP_LPJ_G0026965.1 mouse_genomes_project 2 188327774 188328321 + Tcea2 protein_coding processed_transcript MGP_LPJ_T0059383.1 MGP_LPJ_G0026882.1 mouse_genomes_project 2 178665491 178675813 + MGP_LPJ_P0059383 Tfap2c protein_coding unknown_likely_coding MGP_LPJ_T0059384.1 MGP_LPJ_G0026882.1 mouse_genomes_project 2 178666419 178676265 + Tfap2c protein_coding processed_transcript MGP_LPJ_T0059385.1 MGP_LPJ_G0026882.1 mouse_genomes_project 2 178666437 178676387 + MGP_LPJ_P0059385 Tfap2c protein_coding protein_coding MGP_LPJ_T0003966.1 MGP_LPJ_G0003543.1 mouse_genomes_project 2 31870990 31873396 + Gm13536 antisense antisense MGP_LPJ_T0055585.1 MGP_LPJ_G0025870.1 mouse_genomes_project 2 86458759 86459701 + MGP_LPJ_P0055585 Olfr1008 protein_coding protein_coding MGP_LPJ_T0007393.1 MGP_LPJ_G0006063.1 mouse_genomes_project 2 166503420 166544613 + Gm14243 lincRNA lincRNA MGP_LPJ_T0056566.1 MGP_LPJ_G0026231.1 mouse_genomes_project 2 116054414 116067109 + MGP_LPJ_P0056566 Tmco5b protein_coding protein_coding MGP_LPJ_T0010433.1 MGP_LPJ_G0008551.1 mouse_genomes_project 2 41212241 41212371 - Mir6336 miRNA miRNA MGP_LPJ_T0003924.1 MGP_LPJ_G0003511.1 mouse_genomes_project 2 18333721 18337578 - Gm13362 antisense antisense MGP_LPJ_T0004164.1 MGP_LPJ_G0003685.1 mouse_genomes_project 2 167777965 167781094 + Ptprtos antisense antisense MGP_LPJ_T0013726.1 MGP_LPJ_G0011817.1 mouse_genomes_project 2 135614829 135617792 + processed_pseudogene processed_pseudogene MGP_LPJ_T0053157.1 MGP_LPJ_G0025410.1 mouse_genomes_project 2 24096234 24125965 - MGP_LPJ_P0053157 Qsox2 protein_coding protein_coding MGP_LPJ_T0053158.1 MGP_LPJ_G0025410.1 mouse_genomes_project 2 24096236 24126138 - MGP_LPJ_P0053158 Qsox2 protein_coding protein_coding MGP_LPJ_T0013652.1 MGP_LPJ_G0011743.1 mouse_genomes_project 2 104271837 104272805 - processed_pseudogene processed_pseudogene MGP_LPJ_T0058816.1 MGP_LPJ_G0026741.1 mouse_genomes_project 2 166038588 166069786 + MGP_LPJ_P0058816 Plcg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0058817.1 MGP_LPJ_G0026741.1 mouse_genomes_project 2 166038598 166083082 + MGP_LPJ_P0058817 Plcg1 protein_coding protein_coding MGP_LPJ_T0058818.1 MGP_LPJ_G0026741.1 mouse_genomes_project 2 166038987 166055172 + MGP_LPJ_P0058818 Plcg1 protein_coding protein_coding MGP_LPJ_T0058819.1 MGP_LPJ_G0026741.1 mouse_genomes_project 2 166039021 166070570 + MGP_LPJ_P0058819 Plcg1 protein_coding protein_coding MGP_LPJ_T0058820.1 MGP_LPJ_G0026741.1 mouse_genomes_project 2 166048296 166069790 + Plcg1 protein_coding processed_transcript MGP_LPJ_T0058822.1 MGP_LPJ_G0026741.1 mouse_genomes_project 2 166059770 166069439 + Plcg1 protein_coding retained_intron MGP_LPJ_T0058823.1 MGP_LPJ_G0026741.1 mouse_genomes_project 2 166059835 166066191 + Plcg1 protein_coding retained_intron MGP_LPJ_T0058824.1 MGP_LPJ_G0026741.1 mouse_genomes_project 2 166061350 166062148 + Plcg1 protein_coding retained_intron MGP_LPJ_T0058825.1 MGP_LPJ_G0026741.1 mouse_genomes_project 2 166061830 166062453 + Plcg1 protein_coding retained_intron MGP_LPJ_T0058826.1 MGP_LPJ_G0026741.1 mouse_genomes_project 2 166061855 166066731 + Plcg1 protein_coding processed_transcript MGP_LPJ_T0058827.1 MGP_LPJ_G0026741.1 mouse_genomes_project 2 166062189 166064431 + Plcg1 protein_coding retained_intron MGP_LPJ_T0058828.1 MGP_LPJ_G0026741.1 mouse_genomes_project 2 166067401 166069501 + MGP_LPJ_P0058828 Plcg1 protein_coding protein_coding MGP_LPJ_T0053608.1 MGP_LPJ_G0025486.1 mouse_genomes_project 2 28256149 28275388 + MGP_LPJ_P0053608 Tbc1d13 protein_coding protein_coding MGP_LPJ_T0053609.1 MGP_LPJ_G0025486.1 mouse_genomes_project 2 28256149 28259702 + MGP_LPJ_P0053609 Tbc1d13 protein_coding nonsense_mediated_decay MGP_LPJ_T0053610.1 MGP_LPJ_G0025486.1 mouse_genomes_project 2 28256175 28257558 + Tbc1d13 protein_coding retained_intron MGP_LPJ_T0053611.1 MGP_LPJ_G0025486.1 mouse_genomes_project 2 28256194 28259585 + Tbc1d13 protein_coding processed_transcript MGP_LPJ_T0053612.1 MGP_LPJ_G0025486.1 mouse_genomes_project 2 28256209 28259082 + MGP_LPJ_P0053612 Tbc1d13 protein_coding nonsense_mediated_decay MGP_LPJ_T0053613.1 MGP_LPJ_G0025486.1 mouse_genomes_project 2 28256224 28259919 + Tbc1d13 protein_coding processed_transcript MGP_LPJ_T0053614.1 MGP_LPJ_G0025486.1 mouse_genomes_project 2 28259435 28264700 + Tbc1d13 protein_coding processed_transcript MGP_LPJ_T0053615.1 MGP_LPJ_G0025486.1 mouse_genomes_project 2 28264454 28269272 + Tbc1d13 protein_coding retained_intron MGP_LPJ_T0059041.1 MGP_LPJ_G0026811.1 mouse_genomes_project 2 170385355 170389541 + MGP_LPJ_P0059041 Zswim1 protein_coding protein_coding MGP_LPJ_T0059042.1 MGP_LPJ_G0026811.1 mouse_genomes_project 2 170385682 170387938 + MGP_LPJ_P0059042 Zswim1 protein_coding protein_coding MGP_LPJ_T0056336.1 MGP_LPJ_G0026149.1 mouse_genomes_project 2 106163973 106203385 + MGP_LPJ_P0056336 Fbxo3 protein_coding protein_coding MGP_LPJ_T0056337.1 MGP_LPJ_G0026149.1 mouse_genomes_project 2 106164073 106196159 + MGP_LPJ_P0056337 Fbxo3 protein_coding unknown_likely_coding MGP_LPJ_T0056338.1 MGP_LPJ_G0026149.1 mouse_genomes_project 2 106164090 106197668 + MGP_LPJ_P0056338 Fbxo3 protein_coding protein_coding MGP_LPJ_T0056339.1 MGP_LPJ_G0026149.1 mouse_genomes_project 2 106164092 106203148 + MGP_LPJ_P0056339 Fbxo3 protein_coding protein_coding MGP_LPJ_T0056340.1 MGP_LPJ_G0026149.1 mouse_genomes_project 2 106164094 106197635 + Fbxo3 protein_coding processed_transcript MGP_LPJ_T0056341.1 MGP_LPJ_G0026149.1 mouse_genomes_project 2 106164106 106197649 + MGP_LPJ_P0056341 Fbxo3 protein_coding protein_coding MGP_LPJ_T0007370.1 MGP_LPJ_G0006044.1 mouse_genomes_project 2 155314522 155315160 - Gm28450 lincRNA lincRNA MGP_LPJ_T0010514.1 MGP_LPJ_G0008632.1 mouse_genomes_project 2 188220978 188221047 - Mir7006 miRNA miRNA MGP_LPJ_T0055277.1 MGP_LPJ_G0025797.1 mouse_genomes_project 2 76682957 76684381 + Osbpl6 protein_coding processed_transcript MGP_LPJ_T0055278.1 MGP_LPJ_G0025797.1 mouse_genomes_project 2 76682987 76876511 + MGP_LPJ_P0055278 Osbpl6 protein_coding protein_coding MGP_LPJ_T0055279.1 MGP_LPJ_G0025797.1 mouse_genomes_project 2 76682987 76876515 + MGP_LPJ_P0055279 Osbpl6 protein_coding protein_coding MGP_LPJ_T0055280.1 MGP_LPJ_G0025797.1 mouse_genomes_project 2 76683007 76872464 + MGP_LPJ_P0055280 Osbpl6 protein_coding protein_coding MGP_LPJ_T0055281.1 MGP_LPJ_G0025797.1 mouse_genomes_project 2 76683010 76683917 + Osbpl6 protein_coding processed_transcript MGP_LPJ_T0055282.1 MGP_LPJ_G0025797.1 mouse_genomes_project 2 76768512 76816487 + Osbpl6 protein_coding processed_transcript MGP_LPJ_T0055283.1 MGP_LPJ_G0025797.1 mouse_genomes_project 2 76823281 76871913 + MGP_LPJ_P0055283 Osbpl6 protein_coding nonsense_mediated_decay MGP_LPJ_T0055284.1 MGP_LPJ_G0025797.1 mouse_genomes_project 2 76843061 76854957 + Osbpl6 protein_coding processed_transcript MGP_LPJ_T0056800.1 MGP_LPJ_G0026289.1 mouse_genomes_project 2 122894266 122914531 + MGP_LPJ_P0056800 Tyro3 protein_coding protein_coding MGP_LPJ_T0056801.1 MGP_LPJ_G0026289.1 mouse_genomes_project 2 122895763 122902174 + Tyro3 protein_coding processed_transcript MGP_LPJ_T0056802.1 MGP_LPJ_G0026289.1 mouse_genomes_project 2 122895851 122899867 + Tyro3 protein_coding processed_transcript MGP_LPJ_T0056803.1 MGP_LPJ_G0026289.1 mouse_genomes_project 2 122896038 122914531 + MGP_LPJ_P0056803 Tyro3 protein_coding protein_coding MGP_LPJ_T0056804.1 MGP_LPJ_G0026289.1 mouse_genomes_project 2 122897639 122899825 + Tyro3 protein_coding processed_transcript MGP_LPJ_T0056805.1 MGP_LPJ_G0026289.1 mouse_genomes_project 2 122899618 122904510 + Tyro3 protein_coding retained_intron MGP_LPJ_T0056806.1 MGP_LPJ_G0026289.1 mouse_genomes_project 2 122905726 122914518 + Tyro3 protein_coding retained_intron MGP_LPJ_T0056807.1 MGP_LPJ_G0026289.1 mouse_genomes_project 2 122907358 122908904 + Tyro3 protein_coding retained_intron MGP_LPJ_T0055743.1 MGP_LPJ_G0026014.1 mouse_genomes_project 2 90269579 90270515 + MGP_LPJ_P0055743 Olfr1212 protein_coding protein_coding MGP_LPJ_T0057737.1 MGP_LPJ_G0026484.1 mouse_genomes_project 2 136672221 136701308 + MGP_LPJ_P0057737 Mcm8 protein_coding protein_coding MGP_LPJ_T0057738.1 MGP_LPJ_G0026484.1 mouse_genomes_project 2 136672221 136701007 + MGP_LPJ_P0057738 Mcm8 protein_coding protein_coding MGP_LPJ_T0057739.1 MGP_LPJ_G0026484.1 mouse_genomes_project 2 136672304 136674105 + Mcm8 protein_coding processed_transcript MGP_LPJ_T0058004.1 MGP_LPJ_G0026550.1 mouse_genomes_project 2 153255070 153257954 - MGP_LPJ_P0058004 Cst11 protein_coding protein_coding MGP_LPJ_T0055696.1 MGP_LPJ_G0025969.1 mouse_genomes_project 2 89016127 89017060 + MGP_LPJ_P0055696 Olfr1152 protein_coding protein_coding MGP_LPJ_T0100620.1 MGP_LPJ_G0038883.1 mouse_genomes_project 2 146968650 146968766 + Gm22310 snoRNA snoRNA MGP_LPJ_T0058858.1 MGP_LPJ_G0026747.1 mouse_genomes_project 2 168346463 168347088 - MGP_LPJ_P0058858 Cisd3 protein_coding protein_coding MGP_LPJ_T0001072.1 MGP_LPJ_G0000997.1 mouse_genomes_project 2 10553560 10555425 - TEC TEC MGP_LPJ_T0004087.1 MGP_LPJ_G0003625.1 mouse_genomes_project 2 124438506 124440829 - Gm14978 antisense antisense MGP_LPJ_T0058300.1 MGP_LPJ_G0026640.1 mouse_genomes_project 2 158766159 158770559 + Bpifb4 protein_coding retained_intron MGP_LPJ_T0058301.1 MGP_LPJ_G0026640.1 mouse_genomes_project 2 158766168 158792016 + MGP_LPJ_P0058301 Bpifb4 protein_coding protein_coding MGP_LPJ_T0058302.1 MGP_LPJ_G0026640.1 mouse_genomes_project 2 158768819 158791797 + MGP_LPJ_P0058302 Bpifb4 protein_coding protein_coding MGP_LPJ_T0058303.1 MGP_LPJ_G0026640.1 mouse_genomes_project 2 158770225 158772794 + Bpifb4 protein_coding retained_intron MGP_LPJ_T0058304.1 MGP_LPJ_G0026640.1 mouse_genomes_project 2 158771879 158791797 + MGP_LPJ_P0058304 Bpifb4 protein_coding protein_coding MGP_LPJ_T0057492.1 MGP_LPJ_G0026433.1 mouse_genomes_project 2 133867731 133875628 - Snrpb protein_coding retained_intron MGP_LPJ_T0057493.1 MGP_LPJ_G0026433.1 mouse_genomes_project 2 133867952 133875728 - MGP_LPJ_P0057493 Snrpb protein_coding protein_coding MGP_LPJ_T0057494.1 MGP_LPJ_G0026433.1 mouse_genomes_project 2 133868104 133875728 - MGP_LPJ_P0057494 Snrpb protein_coding nonsense_mediated_decay MGP_LPJ_T0057495.1 MGP_LPJ_G0026433.1 mouse_genomes_project 2 133873176 133875659 - Snrpb protein_coding retained_intron MGP_LPJ_T0059276.1 MGP_LPJ_G0026852.1 mouse_genomes_project 2 173471531 173473035 + MGP_LPJ_P0059276 Cebpb protein_coding protein_coding MGP_LPJ_T0054703.1 MGP_LPJ_G0025685.1 mouse_genomes_project 2 58537808 58735305 + MGP_LPJ_P0054703 Pkp4 protein_coding protein_coding MGP_LPJ_T0054704.1 MGP_LPJ_G0025685.1 mouse_genomes_project 2 58537808 58735304 + MGP_LPJ_P0054704 Pkp4 protein_coding protein_coding MGP_LPJ_T0054705.1 MGP_LPJ_G0025685.1 mouse_genomes_project 2 58537865 58734924 + MGP_LPJ_P0054705 Pkp4 protein_coding nonsense_mediated_decay MGP_LPJ_T0054706.1 MGP_LPJ_G0025685.1 mouse_genomes_project 2 58537865 58717659 + MGP_LPJ_P0054706 Pkp4 protein_coding protein_coding MGP_LPJ_T0054707.1 MGP_LPJ_G0025685.1 mouse_genomes_project 2 58537893 58735308 + MGP_LPJ_P0054707 Pkp4 protein_coding protein_coding MGP_LPJ_T0054708.1 MGP_LPJ_G0025685.1 mouse_genomes_project 2 58537905 58684205 + Pkp4 protein_coding processed_transcript MGP_LPJ_T0054709.1 MGP_LPJ_G0025685.1 mouse_genomes_project 2 58537928 58717662 + MGP_LPJ_P0054709 Pkp4 protein_coding nonsense_mediated_decay MGP_LPJ_T0054710.1 MGP_LPJ_G0025685.1 mouse_genomes_project 2 58538812 58591877 + Pkp4 protein_coding processed_transcript MGP_LPJ_T0054711.1 MGP_LPJ_G0025685.1 mouse_genomes_project 2 58538812 58684437 + MGP_LPJ_P0054711 Pkp4 protein_coding nonsense_mediated_decay MGP_LPJ_T0054712.1 MGP_LPJ_G0025685.1 mouse_genomes_project 2 58577649 58591892 + Pkp4 protein_coding processed_transcript MGP_LPJ_T0054713.1 MGP_LPJ_G0025685.1 mouse_genomes_project 2 58591528 58735307 + MGP_LPJ_P0054713 Pkp4 protein_coding unknown_likely_coding MGP_LPJ_T0054714.1 MGP_LPJ_G0025685.1 mouse_genomes_project 2 58606594 58735305 + MGP_LPJ_P0054714 Pkp4 protein_coding protein_coding MGP_LPJ_T0054715.1 MGP_LPJ_G0025685.1 mouse_genomes_project 2 58645228 58687308 + Pkp4 protein_coding processed_transcript MGP_LPJ_T0054716.1 MGP_LPJ_G0025685.1 mouse_genomes_project 2 58701700 58735305 + Pkp4 protein_coding processed_transcript MGP_LPJ_T0054717.1 MGP_LPJ_G0025685.1 mouse_genomes_project 2 58720982 58727042 + Pkp4 protein_coding processed_transcript MGP_LPJ_T0055575.1 MGP_LPJ_G0025866.1 mouse_genomes_project 2 86334728 86364581 - MGP_LPJ_P0055575 protein_coding protein_coding MGP_LPJ_T0055577.1 MGP_LPJ_G0025866.1 mouse_genomes_project 2 86335782 86339442 - protein_coding retained_intron MGP_LPJ_T0055579.1 MGP_LPJ_G0025866.1 mouse_genomes_project 2 86351598 86364557 - MGP_LPJ_P0055579 protein_coding protein_coding MGP_LPJ_T0055580.1 MGP_LPJ_G0025866.1 mouse_genomes_project 2 86351599 86364565 - protein_coding retained_intron MGP_LPJ_T0055581.1 MGP_LPJ_G0025866.1 mouse_genomes_project 2 86354375 86364539 - protein_coding processed_transcript MGP_LPJ_T0004051.1 MGP_LPJ_G0003603.1 mouse_genomes_project 2 91931894 91937751 + 4933423P22Rik antisense antisense MGP_LPJ_T0004052.1 MGP_LPJ_G0003603.1 mouse_genomes_project 2 91931908 91941334 + 4933423P22Rik antisense antisense MGP_LPJ_T0007236.1 MGP_LPJ_G0005938.1 mouse_genomes_project 2 72846202 72918581 - 6430710C18Rik lincRNA lincRNA MGP_LPJ_T0007237.1 MGP_LPJ_G0005938.1 mouse_genomes_project 2 72846861 72851225 - 6430710C18Rik lincRNA lincRNA MGP_LPJ_T0007238.1 MGP_LPJ_G0005938.1 mouse_genomes_project 2 72886072 72918626 - 6430710C18Rik lincRNA lincRNA MGP_LPJ_T0007239.1 MGP_LPJ_G0005938.1 mouse_genomes_project 2 72886389 72901537 - 6430710C18Rik lincRNA lincRNA MGP_LPJ_T0013409.1 MGP_LPJ_G0011500.1 mouse_genomes_project 2 15804529 15805008 - processed_pseudogene processed_pseudogene MGP_LPJ_T0052628.1 MGP_LPJ_G0025310.1 mouse_genomes_project 2 16569710 16571152 + MGP_LPJ_P0052628 4930426L09Rik protein_coding protein_coding MGP_LPJ_T0013722.1 MGP_LPJ_G0011813.1 mouse_genomes_project 2 134725912 134726381 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004117.1 MGP_LPJ_G0003645.1 mouse_genomes_project 2 136704609 136705867 - Gm14104 antisense antisense MGP_LPJ_T0013792.1 MGP_LPJ_G0011883.1 mouse_genomes_project 2 160520798 160521260 + processed_pseudogene processed_pseudogene MGP_LPJ_T0054136.1 MGP_LPJ_G0025564.1 mouse_genomes_project 2 31826660 31853242 - MGP_LPJ_P0054136 Zbtb34 protein_coding protein_coding MGP_LPJ_T0054137.1 MGP_LPJ_G0025564.1 mouse_genomes_project 2 31826660 31850140 - MGP_LPJ_P0054137 Zbtb34 protein_coding protein_coding MGP_LPJ_T0054138.1 MGP_LPJ_G0025564.1 mouse_genomes_project 2 31832471 31853235 - Zbtb34 protein_coding processed_transcript MGP_LPJ_T0013563.1 MGP_LPJ_G0011654.1 mouse_genomes_project 2 73272000 73272799 + processed_pseudogene processed_pseudogene MGP_LPJ_T0059046.1 MGP_LPJ_G0026814.1 mouse_genomes_project 2 170396296 170407540 + MGP_LPJ_P0059046 Ctsa protein_coding protein_coding MGP_LPJ_T0059047.1 MGP_LPJ_G0026814.1 mouse_genomes_project 2 170396296 170406523 + MGP_LPJ_P0059047 Ctsa protein_coding protein_coding MGP_LPJ_T0059048.1 MGP_LPJ_G0026814.1 mouse_genomes_project 2 170396310 170397183 + Ctsa protein_coding processed_transcript MGP_LPJ_T0059049.1 MGP_LPJ_G0026814.1 mouse_genomes_project 2 170396324 170407540 + MGP_LPJ_P0059049 Ctsa protein_coding protein_coding MGP_LPJ_T0059050.1 MGP_LPJ_G0026814.1 mouse_genomes_project 2 170396332 170397486 + MGP_LPJ_P0059050 Ctsa protein_coding protein_coding MGP_LPJ_T0059051.1 MGP_LPJ_G0026814.1 mouse_genomes_project 2 170396349 170397203 + Ctsa protein_coding processed_transcript MGP_LPJ_T0059052.1 MGP_LPJ_G0026814.1 mouse_genomes_project 2 170396349 170399115 + MGP_LPJ_P0059052 Ctsa protein_coding protein_coding MGP_LPJ_T0059053.1 MGP_LPJ_G0026814.1 mouse_genomes_project 2 170397230 170397845 + Ctsa protein_coding retained_intron MGP_LPJ_T0059054.1 MGP_LPJ_G0026814.1 mouse_genomes_project 2 170397238 170400371 + MGP_LPJ_P0059054 Ctsa protein_coding protein_coding MGP_LPJ_T0059055.1 MGP_LPJ_G0026814.1 mouse_genomes_project 2 170397270 170398298 + Ctsa protein_coding retained_intron MGP_LPJ_T0059056.1 MGP_LPJ_G0026814.1 mouse_genomes_project 2 170397281 170399846 + MGP_LPJ_P0059056 Ctsa protein_coding protein_coding MGP_LPJ_T0059057.1 MGP_LPJ_G0026814.1 mouse_genomes_project 2 170397453 170398617 + Ctsa protein_coding retained_intron MGP_LPJ_T0059058.1 MGP_LPJ_G0026814.1 mouse_genomes_project 2 170397453 170400404 + Ctsa protein_coding retained_intron MGP_LPJ_T0059059.1 MGP_LPJ_G0026814.1 mouse_genomes_project 2 170397496 170399841 + Ctsa protein_coding retained_intron MGP_LPJ_T0059060.1 MGP_LPJ_G0026814.1 mouse_genomes_project 2 170397733 170399145 + Ctsa protein_coding processed_transcript MGP_LPJ_T0059061.1 MGP_LPJ_G0026814.1 mouse_genomes_project 2 170397896 170398893 + Ctsa protein_coding retained_intron MGP_LPJ_T0059062.1 MGP_LPJ_G0026814.1 mouse_genomes_project 2 170400550 170404164 + Ctsa protein_coding retained_intron MGP_LPJ_T0017829.1 MGP_LPJ_G0015393.1 mouse_genomes_project 2 155256802 155258244 + E130215H24Rik processed_transcript processed_transcript MGP_LPJ_T0053518.1 MGP_LPJ_G0025475.1 mouse_genomes_project 2 27893531 27908050 + MGP_LPJ_P0053518 Slc27a4 protein_coding protein_coding MGP_LPJ_T0053519.1 MGP_LPJ_G0025475.1 mouse_genomes_project 2 27897894 27901474 + Slc27a4 protein_coding processed_transcript MGP_LPJ_T0055534.1 MGP_LPJ_G0025849.1 mouse_genomes_project 2 85496508 85534987 - MGP_LPJ_P0055534 P2rx3 protein_coding protein_coding MGP_LPJ_T0055535.1 MGP_LPJ_G0025849.1 mouse_genomes_project 2 85496567 85536962 - MGP_LPJ_P0055535 P2rx3 protein_coding protein_coding MGP_LPJ_T0055536.1 MGP_LPJ_G0025849.1 mouse_genomes_project 2 85496768 85534822 - MGP_LPJ_P0055536 P2rx3 protein_coding protein_coding MGP_LPJ_T0055537.1 MGP_LPJ_G0025849.1 mouse_genomes_project 2 85522711 85532826 - P2rx3 protein_coding processed_transcript MGP_LPJ_T0055538.1 MGP_LPJ_G0025849.1 mouse_genomes_project 2 85531568 85532710 - P2rx3 protein_coding processed_transcript MGP_LPJ_T0056748.1 MGP_LPJ_G0026273.1 mouse_genomes_project 2 122270695 122282151 - MGP_LPJ_P0056748 Ppp1r14d protein_coding protein_coding MGP_LPJ_T0056749.1 MGP_LPJ_G0026273.1 mouse_genomes_project 2 122270716 122282110 - MGP_LPJ_P0056749 Ppp1r14d protein_coding protein_coding MGP_LPJ_T0010475.1 MGP_LPJ_G0008593.1 mouse_genomes_project 2 130392933 130393069 - Mir3473g miRNA miRNA MGP_LPJ_T0058967.1 MGP_LPJ_G0026784.1 mouse_genomes_project 2 169912437 169926881 - MGP_LPJ_P0058967 Matn4 protein_coding protein_coding MGP_LPJ_T0058968.1 MGP_LPJ_G0026784.1 mouse_genomes_project 2 169912437 169926883 - MGP_LPJ_P0058968 Matn4 protein_coding protein_coding MGP_LPJ_T0058969.1 MGP_LPJ_G0026784.1 mouse_genomes_project 2 169912437 169927429 - MGP_LPJ_P0058969 Matn4 protein_coding protein_coding MGP_LPJ_T0058970.1 MGP_LPJ_G0026784.1 mouse_genomes_project 2 169912437 169926881 - MGP_LPJ_P0058970 Matn4 protein_coding protein_coding MGP_LPJ_T0058971.1 MGP_LPJ_G0026784.1 mouse_genomes_project 2 169916944 169926882 - Matn4 protein_coding retained_intron MGP_LPJ_T0099349.1 MGP_LPJ_G0037612.1 mouse_genomes_project 2 124276263 124276369 - Gm23858 snRNA snRNA MGP_LPJ_T0102011.1 MGP_LPJ_G0040048.1 mouse_genomes_project 2 34909250 34910189 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0010452.1 MGP_LPJ_G0008570.1 mouse_genomes_project 2 94014110 94014173 - Mir7000 miRNA miRNA MGP_LPJ_T0007346.1 MGP_LPJ_G0006024.1 mouse_genomes_project 2 136816606 136817970 + Gm14102 lincRNA lincRNA MGP_LPJ_T0055269.1 MGP_LPJ_G0025791.1 mouse_genomes_project 2 76178763 76184788 - MGP_LPJ_P0055269 protein_coding protein_coding MGP_LPJ_T0059365.1 MGP_LPJ_G0026875.1 mouse_genomes_project 2 178445361 178456735 + MGP_LPJ_P0059365 Fam210b protein_coding protein_coding MGP_LPJ_T0054784.1 MGP_LPJ_G0025695.1 mouse_genomes_project 2 60198336 60418868 - MGP_LPJ_P0054784 Rbms1 protein_coding protein_coding MGP_LPJ_T0054785.1 MGP_LPJ_G0025695.1 mouse_genomes_project 2 60200103 60332518 - MGP_LPJ_P0054785 Rbms1 protein_coding protein_coding MGP_LPJ_T0054786.1 MGP_LPJ_G0025695.1 mouse_genomes_project 2 60200873 60332550 - MGP_LPJ_P0054786 Rbms1 protein_coding protein_coding MGP_LPJ_T0054787.1 MGP_LPJ_G0025695.1 mouse_genomes_project 2 60201706 60210458 - Rbms1 protein_coding processed_transcript MGP_LPJ_T0054788.1 MGP_LPJ_G0025695.1 mouse_genomes_project 2 60203564 60229071 - Rbms1 protein_coding processed_transcript MGP_LPJ_T0054789.1 MGP_LPJ_G0025695.1 mouse_genomes_project 2 60293445 60339132 - Rbms1 protein_coding processed_transcript MGP_LPJ_T0054790.1 MGP_LPJ_G0025695.1 mouse_genomes_project 2 60293445 60340107 - Rbms1 protein_coding processed_transcript MGP_LPJ_T0054791.1 MGP_LPJ_G0025695.1 mouse_genomes_project 2 60339288 60339585 - Rbms1 protein_coding processed_transcript MGP_LPJ_T0054792.1 MGP_LPJ_G0025695.1 mouse_genomes_project 2 60339500 60340073 - Rbms1 protein_coding processed_transcript MGP_LPJ_T0055477.1 MGP_LPJ_G0025831.1 mouse_genomes_project 2 85081709 85162976 - MGP_LPJ_P0055477 protein_coding protein_coding MGP_LPJ_T0010453.1 MGP_LPJ_G0008571.1 mouse_genomes_project 2 94233397 94233469 + Mir7221 miRNA miRNA MGP_LPJ_T0098024.1 MGP_LPJ_G0036305.1 mouse_genomes_project 2 27823673 27824004 - pseudogene pseudogene MGP_LPJ_T0010358.1 MGP_LPJ_G0008476.1 mouse_genomes_project 2 7726880 7727001 + Mir669d miRNA miRNA MGP_LPJ_T0059010.1 MGP_LPJ_G0026799.1 mouse_genomes_project 2 170208505 170209828 + MGP_LPJ_P0059010 Wfdc10 protein_coding protein_coding MGP_LPJ_T0059272.1 MGP_LPJ_G0026851.1 mouse_genomes_project 2 173417801 173436948 - MGP_LPJ_P0059272 Tmem189 protein_coding protein_coding MGP_LPJ_T0059273.1 MGP_LPJ_G0026851.1 mouse_genomes_project 2 173418420 173472439 - Tmem189 protein_coding processed_transcript MGP_LPJ_T0059274.1 MGP_LPJ_G0026851.1 mouse_genomes_project 2 173418928 173420371 - Tmem189 protein_coding retained_intron MGP_LPJ_T0059275.1 MGP_LPJ_G0026851.1 mouse_genomes_project 2 173429576 173436946 - Tmem189 protein_coding retained_intron MGP_LPJ_T0013444.1 MGP_LPJ_G0011535.1 mouse_genomes_project 2 29908779 29909713 + processed_pseudogene processed_pseudogene MGP_LPJ_T0057991.1 MGP_LPJ_G0026544.1 mouse_genomes_project 2 152863833 152867556 - MGP_LPJ_P0057991 Thbd protein_coding protein_coding MGP_LPJ_T0010490.1 MGP_LPJ_G0008608.1 mouse_genomes_project 2 160601489 160601568 + Mir499 miRNA miRNA MGP_LPJ_T0057261.1 MGP_LPJ_G0026375.1 mouse_genomes_project 2 129470779 129472226 + Fgf7 protein_coding processed_transcript MGP_LPJ_T0057262.1 MGP_LPJ_G0026375.1 mouse_genomes_project 2 129470779 129528492 + MGP_LPJ_P0057262 Fgf7 protein_coding protein_coding MGP_LPJ_T0057263.1 MGP_LPJ_G0026375.1 mouse_genomes_project 2 129471094 129527828 + MGP_LPJ_P0057263 Fgf7 protein_coding protein_coding MGP_LPJ_T0055105.1 MGP_LPJ_G0025755.1 mouse_genomes_project 2 71418948 71502874 + MGP_LPJ_P0055105 Metap1d protein_coding protein_coding MGP_LPJ_T0055106.1 MGP_LPJ_G0025755.1 mouse_genomes_project 2 71419005 71493645 + Metap1d protein_coding processed_transcript MGP_LPJ_T0055107.1 MGP_LPJ_G0025755.1 mouse_genomes_project 2 71419023 71502877 + Metap1d protein_coding processed_transcript MGP_LPJ_T0055108.1 MGP_LPJ_G0025755.1 mouse_genomes_project 2 71419035 71502471 + Metap1d protein_coding processed_transcript MGP_LPJ_T0055109.1 MGP_LPJ_G0025755.1 mouse_genomes_project 2 71487956 71494842 + Metap1d protein_coding processed_transcript MGP_LPJ_T0055110.1 MGP_LPJ_G0025755.1 mouse_genomes_project 2 71493101 71493974 + Metap1d protein_coding processed_transcript MGP_LPJ_T0056876.1 MGP_LPJ_G0026302.1 mouse_genomes_project 2 123526499 123548104 + Ganc protein_coding processed_transcript MGP_LPJ_T0056877.1 MGP_LPJ_G0026302.1 mouse_genomes_project 2 123526804 123543987 + Ganc protein_coding processed_transcript MGP_LPJ_T0056878.1 MGP_LPJ_G0026302.1 mouse_genomes_project 2 123526805 123583664 + Ganc protein_coding processed_transcript MGP_LPJ_T0056879.1 MGP_LPJ_G0026302.1 mouse_genomes_project 2 123526813 123548874 + Ganc protein_coding processed_transcript MGP_LPJ_T0056880.1 MGP_LPJ_G0026302.1 mouse_genomes_project 2 123526827 123587318 + Ganc protein_coding processed_transcript MGP_LPJ_T0056881.1 MGP_LPJ_G0026302.1 mouse_genomes_project 2 123526917 123543985 + Ganc protein_coding processed_transcript MGP_LPJ_T0056882.1 MGP_LPJ_G0026302.1 mouse_genomes_project 2 123526941 123540153 + Ganc protein_coding processed_transcript MGP_LPJ_T0056883.1 MGP_LPJ_G0026302.1 mouse_genomes_project 2 123527371 123588169 + MGP_LPJ_P0056883 Ganc protein_coding protein_coding MGP_LPJ_T0056884.1 MGP_LPJ_G0026302.1 mouse_genomes_project 2 123527377 123538847 + Ganc protein_coding processed_transcript MGP_LPJ_T0056885.1 MGP_LPJ_G0026302.1 mouse_genomes_project 2 123527583 123587334 + Ganc protein_coding processed_transcript MGP_LPJ_T0056886.1 MGP_LPJ_G0026302.1 mouse_genomes_project 2 123528728 123586691 + Ganc protein_coding processed_transcript MGP_LPJ_T0056887.1 MGP_LPJ_G0026302.1 mouse_genomes_project 2 123536087 123561666 + Ganc protein_coding retained_intron MGP_LPJ_T0056888.1 MGP_LPJ_G0026302.1 mouse_genomes_project 2 123547945 123555926 + Ganc protein_coding processed_transcript MGP_LPJ_T0056889.1 MGP_LPJ_G0026302.1 mouse_genomes_project 2 123578667 123586813 + Ganc protein_coding retained_intron MGP_LPJ_T0010471.1 MGP_LPJ_G0008589.1 mouse_genomes_project 2 124114402 124114479 - Gm44325 miRNA miRNA MGP_LPJ_T0059345.1 MGP_LPJ_G0026867.1 mouse_genomes_project 2 176095050 176117583 - MGP_LPJ_P0059345 Zfp217 protein_coding protein_coding MGP_LPJ_T0059346.1 MGP_LPJ_G0026867.1 mouse_genomes_project 2 176095053 176128910 - MGP_LPJ_P0059346 Zfp217 protein_coding protein_coding MGP_LPJ_T0059347.1 MGP_LPJ_G0026867.1 mouse_genomes_project 2 176106739 176117583 - Zfp217 protein_coding processed_transcript MGP_LPJ_T0059348.1 MGP_LPJ_G0026867.1 mouse_genomes_project 2 176107025 176120312 - Zfp217 protein_coding processed_transcript MGP_LPJ_T0059349.1 MGP_LPJ_G0026867.1 mouse_genomes_project 2 176107125 176134509 - Zfp217 protein_coding processed_transcript MGP_LPJ_T0056450.1 MGP_LPJ_G0026175.1 mouse_genomes_project 2 109476518 109480120 - MGP_LPJ_P0056450 Fshb protein_coding protein_coding MGP_LPJ_T0100631.1 MGP_LPJ_G0038894.1 mouse_genomes_project 2 155913656 155913792 + Gm24199 snoRNA snoRNA MGP_LPJ_T0059277.1 MGP_LPJ_G0026853.1 mouse_genomes_project 2 173734684 173777980 + Ptpn1 protein_coding processed_transcript MGP_LPJ_T0059278.1 MGP_LPJ_G0026853.1 mouse_genomes_project 2 173734954 173783486 + MGP_LPJ_P0059278 Ptpn1 protein_coding protein_coding MGP_LPJ_T0059279.1 MGP_LPJ_G0026853.1 mouse_genomes_project 2 173734999 173771019 + Ptpn1 protein_coding processed_transcript MGP_LPJ_T0059280.1 MGP_LPJ_G0026853.1 mouse_genomes_project 2 173734999 173783486 + Ptpn1 protein_coding processed_transcript MGP_LPJ_T0059281.1 MGP_LPJ_G0026853.1 mouse_genomes_project 2 173735022 173766922 + Ptpn1 protein_coding processed_transcript MGP_LPJ_T0059282.1 MGP_LPJ_G0026853.1 mouse_genomes_project 2 173735022 173770967 + Ptpn1 protein_coding processed_transcript MGP_LPJ_T0059283.1 MGP_LPJ_G0026853.1 mouse_genomes_project 2 173754337 173768302 + Ptpn1 protein_coding processed_transcript MGP_LPJ_T0059270.1 MGP_LPJ_G0026850.1 mouse_genomes_project 2 173377217 173406465 - MGP_LPJ_P0059270 Ube2v1 protein_coding protein_coding MGP_LPJ_T0059271.1 MGP_LPJ_G0026850.1 mouse_genomes_project 2 173384467 173406468 - Ube2v1 protein_coding retained_intron MGP_LPJ_T0055624.1 MGP_LPJ_G0025908.1 mouse_genomes_project 2 87215591 87216542 - MGP_LPJ_P0055624 Olfr1058 protein_coding protein_coding MGP_LPJ_T0055258.1 MGP_LPJ_G0025788.1 mouse_genomes_project 2 75871207 75885385 + MGP_LPJ_P0055258 Hnrnpa3 protein_coding protein_coding MGP_LPJ_T0055259.1 MGP_LPJ_G0025788.1 mouse_genomes_project 2 75878464 75881432 + MGP_LPJ_P0055259 Hnrnpa3 protein_coding protein_coding MGP_LPJ_T0055558.1 MGP_LPJ_G0025853.1 mouse_genomes_project 2 85655114 85694819 - MGP_LPJ_P0055558 Lrrc55 protein_coding protein_coding MGP_LPJ_T0055559.1 MGP_LPJ_G0025853.1 mouse_genomes_project 2 85686191 85694819 - MGP_LPJ_P0055559 Lrrc55 protein_coding protein_coding MGP_LPJ_T0059108.1 MGP_LPJ_G0026824.1 mouse_genomes_project 2 170877381 170878671 - Slc35c2 protein_coding retained_intron MGP_LPJ_T0059109.1 MGP_LPJ_G0026824.1 mouse_genomes_project 2 170877381 170888621 - MGP_LPJ_P0059109 Slc35c2 protein_coding nonsense_mediated_decay MGP_LPJ_T0059110.1 MGP_LPJ_G0026824.1 mouse_genomes_project 2 170877381 170888552 - MGP_LPJ_P0059110 Slc35c2 protein_coding protein_coding MGP_LPJ_T0059111.1 MGP_LPJ_G0026824.1 mouse_genomes_project 2 170877381 170888624 - MGP_LPJ_P0059111 Slc35c2 protein_coding protein_coding MGP_LPJ_T0059112.1 MGP_LPJ_G0026824.1 mouse_genomes_project 2 170877381 170888552 - MGP_LPJ_P0059112 Slc35c2 protein_coding protein_coding MGP_LPJ_T0059113.1 MGP_LPJ_G0026824.1 mouse_genomes_project 2 170877381 170888666 - MGP_LPJ_P0059113 Slc35c2 protein_coding protein_coding MGP_LPJ_T0059114.1 MGP_LPJ_G0026824.1 mouse_genomes_project 2 170878281 170883021 - Slc35c2 protein_coding retained_intron MGP_LPJ_T0059115.1 MGP_LPJ_G0026824.1 mouse_genomes_project 2 170879183 170884166 - MGP_LPJ_P0059115 Slc35c2 protein_coding protein_coding MGP_LPJ_T0059116.1 MGP_LPJ_G0026824.1 mouse_genomes_project 2 170879219 170884398 - MGP_LPJ_P0059116 Slc35c2 protein_coding nonsense_mediated_decay MGP_LPJ_T0059117.1 MGP_LPJ_G0026824.1 mouse_genomes_project 2 170881442 170884398 - MGP_LPJ_P0059117 Slc35c2 protein_coding protein_coding MGP_LPJ_T0059118.1 MGP_LPJ_G0026824.1 mouse_genomes_project 2 170881611 170888633 - MGP_LPJ_P0059118 Slc35c2 protein_coding protein_coding MGP_LPJ_T0059119.1 MGP_LPJ_G0026824.1 mouse_genomes_project 2 170881611 170888632 - MGP_LPJ_P0059119 Slc35c2 protein_coding protein_coding MGP_LPJ_T0059120.1 MGP_LPJ_G0026824.1 mouse_genomes_project 2 170881699 170887349 - MGP_LPJ_P0059120 Slc35c2 protein_coding protein_coding MGP_LPJ_T0059121.1 MGP_LPJ_G0026824.1 mouse_genomes_project 2 170881704 170888624 - MGP_LPJ_P0059121 Slc35c2 protein_coding protein_coding MGP_LPJ_T0059122.1 MGP_LPJ_G0026824.1 mouse_genomes_project 2 170882374 170888635 - Slc35c2 protein_coding retained_intron MGP_LPJ_T0059123.1 MGP_LPJ_G0026824.1 mouse_genomes_project 2 170883676 170888569 - MGP_LPJ_P0059123 Slc35c2 protein_coding protein_coding MGP_LPJ_T0052286.1 MGP_LPJ_G0025256.1 mouse_genomes_project 2 2950183 2974398 - MGP_LPJ_P0052286 Sec61a2 protein_coding protein_coding MGP_LPJ_T0052287.1 MGP_LPJ_G0025256.1 mouse_genomes_project 2 2950225 2974300 - MGP_LPJ_P0052287 Sec61a2 protein_coding protein_coding MGP_LPJ_T0052288.1 MGP_LPJ_G0025256.1 mouse_genomes_project 2 2950791 2955665 - MGP_LPJ_P0052288 Sec61a2 protein_coding protein_coding MGP_LPJ_T0052289.1 MGP_LPJ_G0025256.1 mouse_genomes_project 2 2951189 2953993 - Sec61a2 protein_coding processed_transcript MGP_LPJ_T0052290.1 MGP_LPJ_G0025256.1 mouse_genomes_project 2 2952607 2953487 - Sec61a2 protein_coding processed_transcript MGP_LPJ_T0052291.1 MGP_LPJ_G0025256.1 mouse_genomes_project 2 2952994 2956229 - Sec61a2 protein_coding processed_transcript MGP_LPJ_T0052292.1 MGP_LPJ_G0025256.1 mouse_genomes_project 2 2955610 2957196 - Sec61a2 protein_coding processed_transcript MGP_LPJ_T0052293.1 MGP_LPJ_G0025256.1 mouse_genomes_project 2 2955678 2957577 - Sec61a2 protein_coding processed_transcript MGP_LPJ_T0052294.1 MGP_LPJ_G0025256.1 mouse_genomes_project 2 2957060 2974285 - MGP_LPJ_P0052294 Sec61a2 protein_coding protein_coding MGP_LPJ_T0052295.1 MGP_LPJ_G0025256.1 mouse_genomes_project 2 2961001 2974300 - Sec61a2 protein_coding retained_intron MGP_LPJ_T0055780.1 MGP_LPJ_G0026042.1 mouse_genomes_project 2 90897833 90898778 - MGP_LPJ_P0055780 Olfr1246 protein_coding protein_coding MGP_LPJ_T0055774.1 MGP_LPJ_G0026039.1 mouse_genomes_project 2 90799704 90801093 - MGP_LPJ_P0055774 Olfr1242 protein_coding protein_coding MGP_LPJ_T0055775.1 MGP_LPJ_G0026039.1 mouse_genomes_project 2 90799800 90805072 - MGP_LPJ_P0055775 Olfr1242 protein_coding protein_coding MGP_LPJ_T0055776.1 MGP_LPJ_G0026039.1 mouse_genomes_project 2 90800766 90804562 - Olfr1242 protein_coding processed_transcript MGP_LPJ_T0057451.1 MGP_LPJ_G0026422.1 mouse_genomes_project 2 132746657 132751088 + MGP_LPJ_P0057451 Chchd5 protein_coding protein_coding MGP_LPJ_T0057452.1 MGP_LPJ_G0026422.1 mouse_genomes_project 2 132746761 132750967 + Chchd5 protein_coding processed_transcript MGP_LPJ_T0057453.1 MGP_LPJ_G0026422.1 mouse_genomes_project 2 132746807 132750434 + Chchd5 protein_coding retained_intron MGP_LPJ_T0055562.1 MGP_LPJ_G0025856.1 mouse_genomes_project 2 85949851 85950796 - MGP_LPJ_P0055562 Olfr993 protein_coding protein_coding MGP_LPJ_T0007259.1 MGP_LPJ_G0005956.1 mouse_genomes_project 2 78386814 78406046 + lincRNA lincRNA MGP_LPJ_T0007260.1 MGP_LPJ_G0005956.1 mouse_genomes_project 2 78386860 78528970 + lincRNA lincRNA MGP_LPJ_T0101521.1 MGP_LPJ_G0039646.1 mouse_genomes_project 2 87820537 87821484 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0010462.1 MGP_LPJ_G0008580.1 mouse_genomes_project 2 105980404 105980500 - Gm22761 miRNA miRNA MGP_LPJ_T0057235.1 MGP_LPJ_G0026369.1 mouse_genomes_project 2 129054150 129105165 - MGP_LPJ_P0057235 Shc4 protein_coding protein_coding MGP_LPJ_T0057236.1 MGP_LPJ_G0026369.1 mouse_genomes_project 2 129054150 129155241 - MGP_LPJ_P0057236 Shc4 protein_coding protein_coding MGP_LPJ_T0057237.1 MGP_LPJ_G0026369.1 mouse_genomes_project 2 129055767 129105035 - MGP_LPJ_P0057237 Shc4 protein_coding protein_coding MGP_LPJ_T0057239.1 MGP_LPJ_G0026369.1 mouse_genomes_project 2 129123440 129156002 - Shc4 protein_coding retained_intron MGP_LPJ_T0013481.1 MGP_LPJ_G0011572.1 mouse_genomes_project 2 43645545 43648232 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013469.1 MGP_LPJ_G0011560.1 mouse_genomes_project 2 37924743 37925059 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055849.1 MGP_LPJ_G0026072.1 mouse_genomes_project 2 92340150 92359715 + MGP_LPJ_P0055849 Mtch2 protein_coding protein_coding MGP_LPJ_T0055850.1 MGP_LPJ_G0026072.1 mouse_genomes_project 2 92340173 92358293 + MGP_LPJ_P0055850 Mtch2 protein_coding nonsense_mediated_decay MGP_LPJ_T0055851.1 MGP_LPJ_G0026072.1 mouse_genomes_project 2 92340185 92341310 + Mtch2 protein_coding processed_transcript MGP_LPJ_T0055852.1 MGP_LPJ_G0026072.1 mouse_genomes_project 2 92340226 92359545 + MGP_LPJ_P0055852 Mtch2 protein_coding protein_coding MGP_LPJ_T0055853.1 MGP_LPJ_G0026072.1 mouse_genomes_project 2 92340268 92359545 + MGP_LPJ_P0055853 Mtch2 protein_coding protein_coding MGP_LPJ_T0055854.1 MGP_LPJ_G0026072.1 mouse_genomes_project 2 92340282 92358296 + Mtch2 protein_coding processed_transcript MGP_LPJ_T0055855.1 MGP_LPJ_G0026072.1 mouse_genomes_project 2 92345044 92348601 + Mtch2 protein_coding retained_intron MGP_LPJ_T0055856.1 MGP_LPJ_G0026072.1 mouse_genomes_project 2 92345679 92349718 + Mtch2 protein_coding retained_intron MGP_LPJ_T0055857.1 MGP_LPJ_G0026072.1 mouse_genomes_project 2 92354144 92358376 + Mtch2 protein_coding retained_intron MGP_LPJ_T0055858.1 MGP_LPJ_G0026072.1 mouse_genomes_project 2 92356363 92358293 + Mtch2 protein_coding retained_intron MGP_LPJ_T0011521.1 MGP_LPJ_G0009639.1 mouse_genomes_project 2 107382940 107383234 - Gm27538 misc_RNA misc_RNA MGP_LPJ_T0011514.1 MGP_LPJ_G0009632.1 mouse_genomes_project 2 49036338 49036448 - Gm25223 misc_RNA misc_RNA MGP_LPJ_T0001105.1 MGP_LPJ_G0001030.1 mouse_genomes_project 2 37408293 37409066 - TEC TEC MGP_LPJ_T0055525.1 MGP_LPJ_G0025846.1 mouse_genomes_project 2 85427438 85429844 + MGP_LPJ_P0055525 Slc43a3 protein_coding protein_coding MGP_LPJ_T0055526.1 MGP_LPJ_G0025846.1 mouse_genomes_project 2 85427476 85430341 + MGP_LPJ_P0055526 Slc43a3 protein_coding protein_coding MGP_LPJ_T0055527.1 MGP_LPJ_G0025846.1 mouse_genomes_project 2 85427505 85438669 + MGP_LPJ_P0055527 Slc43a3 protein_coding protein_coding MGP_LPJ_T0055528.1 MGP_LPJ_G0025846.1 mouse_genomes_project 2 85427523 85454840 + MGP_LPJ_P0055528 Slc43a3 protein_coding protein_coding MGP_LPJ_T0055529.1 MGP_LPJ_G0025846.1 mouse_genomes_project 2 85427548 85429691 + Slc43a3 protein_coding processed_transcript MGP_LPJ_T0055530.1 MGP_LPJ_G0025846.1 mouse_genomes_project 2 85428899 85442217 + Slc43a3 protein_coding retained_intron MGP_LPJ_T0010399.1 MGP_LPJ_G0008517.1 mouse_genomes_project 2 20312349 20312417 + Mir3967 miRNA miRNA MGP_LPJ_T0004178.1 MGP_LPJ_G0003694.1 mouse_genomes_project 2 170309470 170325757 - Gm11457 antisense antisense MGP_LPJ_T0004179.1 MGP_LPJ_G0003694.1 mouse_genomes_project 2 170309480 170325762 - Gm11457 antisense antisense MGP_LPJ_T0004180.1 MGP_LPJ_G0003694.1 mouse_genomes_project 2 170309492 170325804 - Gm11457 antisense antisense MGP_LPJ_T0013723.1 MGP_LPJ_G0011814.1 mouse_genomes_project 2 135073565 135073844 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017805.1 MGP_LPJ_G0015380.1 mouse_genomes_project 2 128529451 128539082 - Gm14004 processed_transcript processed_transcript MGP_LPJ_T0057275.1 MGP_LPJ_G0026379.1 mouse_genomes_project 2 130077350 130103089 - MGP_LPJ_P0057275 Hdc protein_coding protein_coding MGP_LPJ_T0057276.1 MGP_LPJ_G0026379.1 mouse_genomes_project 2 130078267 130082689 - Hdc protein_coding processed_transcript MGP_LPJ_T0057277.1 MGP_LPJ_G0026379.1 mouse_genomes_project 2 130084663 130103072 - Hdc protein_coding retained_intron MGP_LPJ_T0057278.1 MGP_LPJ_G0026379.1 mouse_genomes_project 2 130088584 130091897 - Hdc protein_coding processed_transcript MGP_LPJ_T0057279.1 MGP_LPJ_G0026379.1 mouse_genomes_project 2 130100584 130103710 - Hdc protein_coding processed_transcript MGP_LPJ_T0098519.1 MGP_LPJ_G0036794.1 mouse_genomes_project 2 1154969 1158601 + Gm37814 sense_intronic sense_intronic MGP_LPJ_T0004159.1 MGP_LPJ_G0003680.1 mouse_genomes_project 2 163203831 163226110 - 2010009K17Rik antisense antisense MGP_LPJ_T0056260.1 MGP_LPJ_G0026138.1 mouse_genomes_project 2 104890931 104987462 - MGP_LPJ_P0056260 Cd44 protein_coding protein_coding MGP_LPJ_T0056261.1 MGP_LPJ_G0026138.1 mouse_genomes_project 2 104890931 104987502 - MGP_LPJ_P0056261 Cd44 protein_coding protein_coding MGP_LPJ_T0056262.1 MGP_LPJ_G0026138.1 mouse_genomes_project 2 104892328 104987332 - MGP_LPJ_P0056262 Cd44 protein_coding protein_coding MGP_LPJ_T0056263.1 MGP_LPJ_G0026138.1 mouse_genomes_project 2 104892349 104987347 - MGP_LPJ_P0056263 Cd44 protein_coding protein_coding MGP_LPJ_T0056264.1 MGP_LPJ_G0026138.1 mouse_genomes_project 2 104893916 104987206 - MGP_LPJ_P0056264 Cd44 protein_coding protein_coding MGP_LPJ_T0056265.1 MGP_LPJ_G0026138.1 mouse_genomes_project 2 104893916 104987187 - MGP_LPJ_P0056265 Cd44 protein_coding protein_coding MGP_LPJ_T0056266.1 MGP_LPJ_G0026138.1 mouse_genomes_project 2 104893926 104987187 - MGP_LPJ_P0056266 Cd44 protein_coding protein_coding MGP_LPJ_T0056267.1 MGP_LPJ_G0026138.1 mouse_genomes_project 2 104893929 104987183 - MGP_LPJ_P0056267 Cd44 protein_coding protein_coding MGP_LPJ_T0056268.1 MGP_LPJ_G0026138.1 mouse_genomes_project 2 104933699 104987295 - Cd44 protein_coding retained_intron MGP_LPJ_T0010472.1 MGP_LPJ_G0008590.1 mouse_genomes_project 2 124601379 124601480 - Gm22953 miRNA miRNA MGP_LPJ_T0007311.1 MGP_LPJ_G0005999.1 mouse_genomes_project 2 118352791 118371995 - 3110099E03Rik lincRNA lincRNA MGP_LPJ_T0007312.1 MGP_LPJ_G0005999.1 mouse_genomes_project 2 118354342 118387377 - 3110099E03Rik lincRNA lincRNA MGP_LPJ_T0007313.1 MGP_LPJ_G0005999.1 mouse_genomes_project 2 118355048 118372001 - 3110099E03Rik lincRNA lincRNA MGP_LPJ_T0013395.1 MGP_LPJ_G0011486.1 mouse_genomes_project 2 12110703 12111421 + processed_pseudogene processed_pseudogene MGP_LPJ_T0058169.1 MGP_LPJ_G0026603.1 mouse_genomes_project 2 157278468 157278669 + MGP_LPJ_P0058169 Gm17416 protein_coding protein_coding MGP_LPJ_T0054196.1 MGP_LPJ_G0025573.1 mouse_genomes_project 2 33330574 33350587 - Fbxw2 protein_coding processed_transcript MGP_LPJ_T0054197.1 MGP_LPJ_G0025573.1 mouse_genomes_project 2 33331238 33353740 - MGP_LPJ_P0054197 Fbxw2 protein_coding protein_coding MGP_LPJ_T0054198.1 MGP_LPJ_G0025573.1 mouse_genomes_project 2 33331398 33350848 - MGP_LPJ_P0054198 Fbxw2 protein_coding protein_coding MGP_LPJ_T0054199.1 MGP_LPJ_G0025573.1 mouse_genomes_project 2 33331399 33353902 - MGP_LPJ_P0054199 Fbxw2 protein_coding protein_coding MGP_LPJ_T0054200.1 MGP_LPJ_G0025573.1 mouse_genomes_project 2 33331401 33353897 - MGP_LPJ_P0054200 Fbxw2 protein_coding protein_coding MGP_LPJ_T0054201.1 MGP_LPJ_G0025573.1 mouse_genomes_project 2 33331401 33353738 - MGP_LPJ_P0054201 Fbxw2 protein_coding protein_coding MGP_LPJ_T0054202.1 MGP_LPJ_G0025573.1 mouse_genomes_project 2 33332313 33353868 - MGP_LPJ_P0054202 Fbxw2 protein_coding protein_coding MGP_LPJ_T0054203.1 MGP_LPJ_G0025573.1 mouse_genomes_project 2 33333338 33334869 - Fbxw2 protein_coding processed_transcript MGP_LPJ_T0054204.1 MGP_LPJ_G0025573.1 mouse_genomes_project 2 33338125 33353978 - Fbxw2 protein_coding processed_transcript MGP_LPJ_T0054205.1 MGP_LPJ_G0025573.1 mouse_genomes_project 2 33339024 33353834 - Fbxw2 protein_coding processed_transcript MGP_LPJ_T0054206.1 MGP_LPJ_G0025573.1 mouse_genomes_project 2 33341678 33353884 - Fbxw2 protein_coding processed_transcript MGP_LPJ_T0054207.1 MGP_LPJ_G0025573.1 mouse_genomes_project 2 33349508 33353874 - Fbxw2 protein_coding retained_intron MGP_LPJ_T0054208.1 MGP_LPJ_G0025573.1 mouse_genomes_project 2 33350270 33353689 - Fbxw2 protein_coding processed_transcript MGP_LPJ_T0054209.1 MGP_LPJ_G0025573.1 mouse_genomes_project 2 33352929 33353882 - Fbxw2 protein_coding processed_transcript MGP_LPJ_T0013703.1 MGP_LPJ_G0011794.1 mouse_genomes_project 2 124658216 124658602 + processed_pseudogene processed_pseudogene MGP_LPJ_T0057093.1 MGP_LPJ_G0026331.1 mouse_genomes_project 2 124604389 124609637 + MGP_LPJ_P0057093 Hypk protein_coding protein_coding MGP_LPJ_T0057094.1 MGP_LPJ_G0026331.1 mouse_genomes_project 2 124607822 124609563 + Hypk protein_coding retained_intron MGP_LPJ_T0057095.1 MGP_LPJ_G0026331.1 mouse_genomes_project 2 124608092 124609799 + MGP_LPJ_P0057095 Hypk protein_coding protein_coding MGP_LPJ_T0057096.1 MGP_LPJ_G0026331.1 mouse_genomes_project 2 124608253 124609436 + Hypk protein_coding retained_intron MGP_LPJ_T0057097.1 MGP_LPJ_G0026331.1 mouse_genomes_project 2 124608263 124609490 + Hypk protein_coding processed_transcript MGP_LPJ_T0013788.1 MGP_LPJ_G0011879.1 mouse_genomes_project 2 160136257 160136886 - processed_pseudogene processed_pseudogene MGP_LPJ_T0056550.1 MGP_LPJ_G0026226.1 mouse_genomes_project 2 115109403 115148652 + MGP_LPJ_P0056550 Katnbl1 protein_coding protein_coding MGP_LPJ_T0056551.1 MGP_LPJ_G0026226.1 mouse_genomes_project 2 115109418 115141930 + Katnbl1 protein_coding retained_intron MGP_LPJ_T0053101.1 MGP_LPJ_G0025397.1 mouse_genomes_project 2 23551272 23554556 + MGP_LPJ_P0053101 Obp2a protein_coding protein_coding MGP_LPJ_T0059657.1 MGP_LPJ_G0026945.1 mouse_genomes_project 2 187781827 187791012 - MGP_LPJ_P0059657 Ptk6 protein_coding protein_coding MGP_LPJ_T0055736.1 MGP_LPJ_G0026007.1 mouse_genomes_project 2 90111667 90112597 + MGP_LPJ_P0055736 Olfr1202 protein_coding protein_coding MGP_LPJ_T0010395.1 MGP_LPJ_G0008513.1 mouse_genomes_project 2 14454905 14455015 - Gm24933 miRNA miRNA MGP_LPJ_T0059737.1 MGP_LPJ_G0026959.1 mouse_genomes_project 2 188143381 188178139 + MGP_LPJ_P0059737 Dnajc5 protein_coding protein_coding MGP_LPJ_T0059738.1 MGP_LPJ_G0026959.1 mouse_genomes_project 2 188143422 188175838 + MGP_LPJ_P0059738 Dnajc5 protein_coding nonsense_mediated_decay MGP_LPJ_T0059739.1 MGP_LPJ_G0026959.1 mouse_genomes_project 2 188143447 188175836 + MGP_LPJ_P0059739 Dnajc5 protein_coding protein_coding MGP_LPJ_T0059740.1 MGP_LPJ_G0026959.1 mouse_genomes_project 2 188143708 188172376 + MGP_LPJ_P0059740 Dnajc5 protein_coding protein_coding MGP_LPJ_T0059741.1 MGP_LPJ_G0026959.1 mouse_genomes_project 2 188143843 188173194 + MGP_LPJ_P0059741 Dnajc5 protein_coding protein_coding MGP_LPJ_T0059742.1 MGP_LPJ_G0026959.1 mouse_genomes_project 2 188172929 188173862 + Dnajc5 protein_coding processed_transcript MGP_LPJ_T0017825.1 MGP_LPJ_G0015390.1 mouse_genomes_project 2 143290504 143715749 - processed_transcript processed_transcript MGP_LPJ_T0052241.1 MGP_LPJ_G0025247.1 mouse_genomes_project 2 1976307 2003463 + MGP_LPJ_P0052241 Phyh protein_coding protein_coding MGP_LPJ_T0052242.1 MGP_LPJ_G0025247.1 mouse_genomes_project 2 1976317 1988641 + Phyh protein_coding processed_transcript MGP_LPJ_T0052243.1 MGP_LPJ_G0025247.1 mouse_genomes_project 2 2002212 2003073 + Phyh protein_coding processed_transcript MGP_LPJ_T0052894.1 MGP_LPJ_G0025358.1 mouse_genomes_project 2 23039436 23045215 - MGP_LPJ_P0052894 Slc34a3 protein_coding protein_coding MGP_LPJ_T0052895.1 MGP_LPJ_G0025358.1 mouse_genomes_project 2 23041320 23043902 - Slc34a3 protein_coding processed_transcript MGP_LPJ_T0052896.1 MGP_LPJ_G0025358.1 mouse_genomes_project 2 23042502 23045069 - Slc34a3 protein_coding processed_transcript MGP_LPJ_T0052897.1 MGP_LPJ_G0025358.1 mouse_genomes_project 2 23042543 23045062 - Slc34a3 protein_coding processed_transcript MGP_LPJ_T0052898.1 MGP_LPJ_G0025358.1 mouse_genomes_project 2 23042548 23044564 - Slc34a3 protein_coding processed_transcript MGP_LPJ_T0052899.1 MGP_LPJ_G0025358.1 mouse_genomes_project 2 23042819 23045085 - Slc34a3 protein_coding processed_transcript MGP_LPJ_T0052900.1 MGP_LPJ_G0025358.1 mouse_genomes_project 2 23043281 23045039 - Slc34a3 protein_coding processed_transcript MGP_LPJ_T0007181.1 MGP_LPJ_G0005891.1 mouse_genomes_project 2 28680049 28684351 + Gm14487 lincRNA lincRNA MGP_LPJ_T0055347.1 MGP_LPJ_G0025806.1 mouse_genomes_project 2 78213456 78285687 - MGP_LPJ_P0055347 Cwc22 protein_coding protein_coding MGP_LPJ_T0055348.1 MGP_LPJ_G0025806.1 mouse_genomes_project 2 78227710 78257556 - Cwc22 protein_coding processed_transcript MGP_LPJ_T0055349.1 MGP_LPJ_G0025806.1 mouse_genomes_project 2 78227710 78285690 - MGP_LPJ_P0055349 Cwc22 protein_coding protein_coding MGP_LPJ_T0055350.1 MGP_LPJ_G0025806.1 mouse_genomes_project 2 78228107 78285679 - MGP_LPJ_P0055350 Cwc22 protein_coding protein_coding MGP_LPJ_T0055351.1 MGP_LPJ_G0025806.1 mouse_genomes_project 2 78239317 78241209 - Cwc22 protein_coding processed_transcript MGP_LPJ_T0055352.1 MGP_LPJ_G0025806.1 mouse_genomes_project 2 78249454 78285706 - Cwc22 protein_coding processed_transcript MGP_LPJ_T0055353.1 MGP_LPJ_G0025806.1 mouse_genomes_project 2 78259067 78285690 - Cwc22 protein_coding processed_transcript MGP_LPJ_T0055354.1 MGP_LPJ_G0025806.1 mouse_genomes_project 2 78262315 78285445 - MGP_LPJ_P0055354 Cwc22 protein_coding protein_coding MGP_LPJ_T0055355.1 MGP_LPJ_G0025806.1 mouse_genomes_project 2 78262401 78285696 - MGP_LPJ_P0055355 Cwc22 protein_coding protein_coding MGP_LPJ_T0055356.1 MGP_LPJ_G0025806.1 mouse_genomes_project 2 78262457 78269668 - Cwc22 protein_coding processed_transcript MGP_LPJ_T0055357.1 MGP_LPJ_G0025806.1 mouse_genomes_project 2 78263803 78269726 - Cwc22 protein_coding processed_transcript MGP_LPJ_T0052190.1 MGP_LPJ_G0025240.1 mouse_genomes_project 2 458927 491065 - MGP_LPJ_P0052190 protein_coding protein_coding MGP_LPJ_T0052191.1 MGP_LPJ_G0025240.1 mouse_genomes_project 2 459053 460240 - protein_coding retained_intron MGP_LPJ_T0052192.1 MGP_LPJ_G0025240.1 mouse_genomes_project 2 461035 463240 - protein_coding retained_intron MGP_LPJ_T0052193.1 MGP_LPJ_G0025240.1 mouse_genomes_project 2 468354 470245 - protein_coding retained_intron MGP_LPJ_T0052194.1 MGP_LPJ_G0025240.1 mouse_genomes_project 2 472645 476571 - protein_coding retained_intron MGP_LPJ_T0052195.1 MGP_LPJ_G0025240.1 mouse_genomes_project 2 478103 491008 - MGP_LPJ_P0052195 protein_coding nonsense_mediated_decay MGP_LPJ_T0052196.1 MGP_LPJ_G0025240.1 mouse_genomes_project 2 479985 491041 - MGP_LPJ_P0052196 protein_coding nonsense_mediated_decay MGP_LPJ_T0052197.1 MGP_LPJ_G0025240.1 mouse_genomes_project 2 489138 490994 - protein_coding retained_intron MGP_LPJ_T0058075.1 MGP_LPJ_G0026574.1 mouse_genomes_project 2 156098503 156101825 - protein_coding processed_transcript MGP_LPJ_T0017697.1 MGP_LPJ_G0015320.1 mouse_genomes_project 2 24355116 24356322 + Gm13568 processed_transcript processed_transcript MGP_LPJ_T0100594.1 MGP_LPJ_G0038857.1 mouse_genomes_project 2 81171494 81171621 + Gm25420 snoRNA snoRNA MGP_LPJ_T0056785.1 MGP_LPJ_G0026287.1 mouse_genomes_project 2 122846747 122855599 - MGP_LPJ_P0056785 Ltk protein_coding protein_coding MGP_LPJ_T0056786.1 MGP_LPJ_G0026287.1 mouse_genomes_project 2 122846749 122853907 - Ltk protein_coding retained_intron MGP_LPJ_T0056787.1 MGP_LPJ_G0026287.1 mouse_genomes_project 2 122846749 122855627 - MGP_LPJ_P0056787 Ltk protein_coding protein_coding MGP_LPJ_T0056788.1 MGP_LPJ_G0026287.1 mouse_genomes_project 2 122846753 122855735 - MGP_LPJ_P0056788 Ltk protein_coding protein_coding MGP_LPJ_T0056789.1 MGP_LPJ_G0026287.1 mouse_genomes_project 2 122846755 122853911 - MGP_LPJ_P0056789 Ltk protein_coding protein_coding MGP_LPJ_T0056790.1 MGP_LPJ_G0026287.1 mouse_genomes_project 2 122846757 122853905 - Ltk protein_coding retained_intron MGP_LPJ_T0013561.1 MGP_LPJ_G0011652.1 mouse_genomes_project 2 73070888 73071185 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013513.1 MGP_LPJ_G0011604.1 mouse_genomes_project 2 55295494 55297794 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055594.1 MGP_LPJ_G0025879.1 mouse_genomes_project 2 86638627 86639791 + MGP_LPJ_P0055594 Olfr1022 protein_coding protein_coding MGP_LPJ_T0100619.1 MGP_LPJ_G0038882.1 mouse_genomes_project 2 133987146 133987216 + Gm23650 snoRNA snoRNA MGP_LPJ_T0052361.1 MGP_LPJ_G0025268.1 mouse_genomes_project 2 7310398 7321625 + Kin protein_coding processed_transcript MGP_LPJ_T0052362.1 MGP_LPJ_G0025268.1 mouse_genomes_project 2 7310429 7322612 + MGP_LPJ_P0052362 Kin protein_coding protein_coding MGP_LPJ_T0052363.1 MGP_LPJ_G0025268.1 mouse_genomes_project 2 7320102 7321985 + Kin protein_coding processed_transcript MGP_LPJ_T0102010.1 MGP_LPJ_G0040047.1 mouse_genomes_project 2 34898009 34898915 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0098518.1 MGP_LPJ_G0036793.1 mouse_genomes_project 2 1115080 1118144 + Gm38085 sense_intronic sense_intronic MGP_LPJ_T0007190.1 MGP_LPJ_G0005898.1 mouse_genomes_project 2 32448640 32450857 + Gm13404 lincRNA lincRNA MGP_LPJ_T0055133.1 MGP_LPJ_G0025760.1 mouse_genomes_project 2 72035461 72324440 + MGP_LPJ_P0055133 Rapgef4 protein_coding protein_coding MGP_LPJ_T0055134.1 MGP_LPJ_G0025760.1 mouse_genomes_project 2 72035468 72091189 + Rapgef4 protein_coding processed_transcript MGP_LPJ_T0055135.1 MGP_LPJ_G0025760.1 mouse_genomes_project 2 72035480 72201025 + Rapgef4 protein_coding processed_transcript MGP_LPJ_T0055136.1 MGP_LPJ_G0025760.1 mouse_genomes_project 2 72035508 72323342 + MGP_LPJ_P0055136 Rapgef4 protein_coding protein_coding MGP_LPJ_T0055137.1 MGP_LPJ_G0025760.1 mouse_genomes_project 2 72115662 72324438 + MGP_LPJ_P0055137 Rapgef4 protein_coding protein_coding MGP_LPJ_T0055138.1 MGP_LPJ_G0025760.1 mouse_genomes_project 2 72116054 72201200 + Rapgef4 protein_coding processed_transcript MGP_LPJ_T0055139.1 MGP_LPJ_G0025760.1 mouse_genomes_project 2 72200437 72259983 + Rapgef4 protein_coding processed_transcript MGP_LPJ_T0055140.1 MGP_LPJ_G0025760.1 mouse_genomes_project 2 72200454 72223950 + Rapgef4 protein_coding processed_transcript MGP_LPJ_T0055141.1 MGP_LPJ_G0025760.1 mouse_genomes_project 2 72241920 72324438 + Rapgef4 protein_coding processed_transcript MGP_LPJ_T0055142.1 MGP_LPJ_G0025760.1 mouse_genomes_project 2 72263622 72273211 + Rapgef4 protein_coding processed_transcript MGP_LPJ_T0055143.1 MGP_LPJ_G0025760.1 mouse_genomes_project 2 72309660 72323621 + Rapgef4 protein_coding processed_transcript MGP_LPJ_T0001107.1 MGP_LPJ_G0001032.1 mouse_genomes_project 2 37520176 37523539 + TEC TEC MGP_LPJ_T0007205.1 MGP_LPJ_G0005909.1 mouse_genomes_project 2 44646356 44666312 + Gm13465 lincRNA lincRNA MGP_LPJ_T0013463.1 MGP_LPJ_G0011554.1 mouse_genomes_project 2 36275943 36276739 + processed_pseudogene processed_pseudogene MGP_LPJ_T0058097.1 MGP_LPJ_G0026577.1 mouse_genomes_project 2 156229899 156247287 + MGP_LPJ_P0058097 Sdcbp2 protein_coding protein_coding MGP_LPJ_T0058164.1 MGP_LPJ_G0026598.1 mouse_genomes_project 2 157183963 157186833 + MGP_LPJ_P0058164 Defb20 protein_coding protein_coding MGP_LPJ_T0010506.1 MGP_LPJ_G0008624.1 mouse_genomes_project 2 180503441 180503509 + Gm27591 miRNA miRNA MGP_LPJ_T0099342.1 MGP_LPJ_G0037605.1 mouse_genomes_project 2 92722441 92722547 + Gm23390 snRNA snRNA MGP_LPJ_T0055240.1 MGP_LPJ_G0025781.1 mouse_genomes_project 2 74876033 74878515 + MGP_LPJ_P0055240 Hoxd9 protein_coding protein_coding MGP_LPJ_T0017856.1 MGP_LPJ_G0015402.1 mouse_genomes_project 2 165205658 165243038 + 4933416E03Rik processed_transcript processed_transcript MGP_LPJ_T0057778.1 MGP_LPJ_G0026493.1 mouse_genomes_project 2 139983071 139990350 + MGP_LPJ_P0057778 Lamp5 protein_coding protein_coding MGP_LPJ_T0057779.1 MGP_LPJ_G0026493.1 mouse_genomes_project 2 139988745 140000655 + MGP_LPJ_P0057779 Lamp5 protein_coding protein_coding MGP_LPJ_T0057780.1 MGP_LPJ_G0026493.1 mouse_genomes_project 2 139989070 139992313 + Lamp5 protein_coding retained_intron MGP_LPJ_T0057781.1 MGP_LPJ_G0026493.1 mouse_genomes_project 2 139989070 139990032 + Lamp5 protein_coding processed_transcript MGP_LPJ_T0057782.1 MGP_LPJ_G0026493.1 mouse_genomes_project 2 139990249 140000643 + Lamp5 protein_coding processed_transcript MGP_LPJ_T0059625.1 MGP_LPJ_G0026941.1 mouse_genomes_project 2 187602697 187623505 - MGP_LPJ_P0059625 Chrna4 protein_coding protein_coding MGP_LPJ_T0059626.1 MGP_LPJ_G0026941.1 mouse_genomes_project 2 187602698 187612648 - MGP_LPJ_P0059626 Chrna4 protein_coding protein_coding MGP_LPJ_T0059627.1 MGP_LPJ_G0026941.1 mouse_genomes_project 2 187606630 187623735 - MGP_LPJ_P0059627 Chrna4 protein_coding protein_coding MGP_LPJ_T0059628.1 MGP_LPJ_G0026941.1 mouse_genomes_project 2 187613744 187623655 - Chrna4 protein_coding processed_transcript MGP_LPJ_T0059629.1 MGP_LPJ_G0026941.1 mouse_genomes_project 2 187618343 187628050 - MGP_LPJ_P0059629 Chrna4 protein_coding protein_coding MGP_LPJ_T0056654.1 MGP_LPJ_G0026252.1 mouse_genomes_project 2 121542333 121564457 - MGP_LPJ_P0056654 Bmf protein_coding protein_coding MGP_LPJ_T0056655.1 MGP_LPJ_G0026252.1 mouse_genomes_project 2 121543808 121562326 - MGP_LPJ_P0056655 Bmf protein_coding protein_coding MGP_LPJ_T0056656.1 MGP_LPJ_G0026252.1 mouse_genomes_project 2 121545545 121559342 - Bmf protein_coding processed_transcript MGP_LPJ_T0056657.1 MGP_LPJ_G0026252.1 mouse_genomes_project 2 121545626 121560071 - Bmf protein_coding processed_transcript MGP_LPJ_T0056658.1 MGP_LPJ_G0026252.1 mouse_genomes_project 2 121545992 121564432 - Bmf protein_coding processed_transcript MGP_LPJ_T0056659.1 MGP_LPJ_G0026252.1 mouse_genomes_project 2 121559938 121561782 - Bmf protein_coding processed_transcript MGP_LPJ_T0056660.1 MGP_LPJ_G0026252.1 mouse_genomes_project 2 121559990 121562366 - Bmf protein_coding processed_transcript MGP_LPJ_T0056661.1 MGP_LPJ_G0026252.1 mouse_genomes_project 2 121561663 121564445 - Bmf protein_coding processed_transcript MGP_LPJ_T0055102.1 MGP_LPJ_G0025754.1 mouse_genomes_project 2 71350689 71407313 + MGP_LPJ_P0055102 Hat1 protein_coding protein_coding MGP_LPJ_T0055103.1 MGP_LPJ_G0025754.1 mouse_genomes_project 2 71350991 71407313 + MGP_LPJ_P0055103 Hat1 protein_coding protein_coding MGP_LPJ_T0055104.1 MGP_LPJ_G0025754.1 mouse_genomes_project 2 71384224 71404529 + Hat1 protein_coding processed_transcript MGP_LPJ_T0017774.1 MGP_LPJ_G0015367.1 mouse_genomes_project 2 112195665 112196593 + Gm20638 processed_transcript processed_transcript MGP_LPJ_T0058935.1 MGP_LPJ_G0026769.1 mouse_genomes_project 2 169506637 169537308 + MGP_LPJ_P0058935 Pabpc1l protein_coding protein_coding MGP_LPJ_T0058936.1 MGP_LPJ_G0026769.1 mouse_genomes_project 2 169512229 169525889 + Pabpc1l protein_coding processed_transcript MGP_LPJ_T0058937.1 MGP_LPJ_G0026769.1 mouse_genomes_project 2 169520575 169526116 + Pabpc1l protein_coding processed_transcript MGP_LPJ_T0058938.1 MGP_LPJ_G0026769.1 mouse_genomes_project 2 169532672 169537308 + Pabpc1l protein_coding processed_transcript MGP_LPJ_T0058939.1 MGP_LPJ_G0026769.1 mouse_genomes_project 2 169533125 169536937 + Pabpc1l protein_coding processed_transcript MGP_LPJ_T0004195.1 MGP_LPJ_G0003708.1 mouse_genomes_project 2 178425290 178438442 + Gm14273 antisense antisense MGP_LPJ_T0010473.1 MGP_LPJ_G0008591.1 mouse_genomes_project 2 125251064 125251138 + miRNA miRNA MGP_LPJ_T0054765.1 MGP_LPJ_G0025691.1 mouse_genomes_project 2 59684774 59718923 - MGP_LPJ_P0054765 Cd302 protein_coding protein_coding MGP_LPJ_T0054766.1 MGP_LPJ_G0025691.1 mouse_genomes_project 2 59684774 59718853 - MGP_LPJ_P0054766 Cd302 protein_coding protein_coding MGP_LPJ_T0056584.1 MGP_LPJ_G0026238.1 mouse_genomes_project 2 116884429 116959124 - MGP_LPJ_P0056584 Aqr protein_coding protein_coding MGP_LPJ_T0056585.1 MGP_LPJ_G0026238.1 mouse_genomes_project 2 116888421 116959062 - MGP_LPJ_P0056585 Aqr protein_coding protein_coding MGP_LPJ_T0056586.1 MGP_LPJ_G0026238.1 mouse_genomes_project 2 116895384 116902462 - Aqr protein_coding processed_transcript MGP_LPJ_T0056587.1 MGP_LPJ_G0026238.1 mouse_genomes_project 2 116916185 116924342 - Aqr protein_coding processed_transcript MGP_LPJ_T0056588.1 MGP_LPJ_G0026238.1 mouse_genomes_project 2 116916566 116959031 - Aqr protein_coding processed_transcript MGP_LPJ_T0056589.1 MGP_LPJ_G0026238.1 mouse_genomes_project 2 116935943 116959123 - Aqr protein_coding processed_transcript MGP_LPJ_T0056590.1 MGP_LPJ_G0026238.1 mouse_genomes_project 2 116942383 116959123 - Aqr protein_coding processed_transcript MGP_LPJ_T0056591.1 MGP_LPJ_G0026238.1 mouse_genomes_project 2 116953829 116959201 - Aqr protein_coding processed_transcript MGP_LPJ_T0011505.1 MGP_LPJ_G0009623.1 mouse_genomes_project 2 21534753 21534928 + Gm26323 misc_RNA misc_RNA MGP_LPJ_T0013793.1 MGP_LPJ_G0011884.1 mouse_genomes_project 2 161053789 161054332 + processed_pseudogene processed_pseudogene MGP_LPJ_T0056345.1 MGP_LPJ_G0026153.1 mouse_genomes_project 2 106253250 106276998 + MGP_LPJ_P0056345 Cd59a protein_coding protein_coding MGP_LPJ_T0056346.1 MGP_LPJ_G0026153.1 mouse_genomes_project 2 106253250 106277003 + MGP_LPJ_P0056346 Cd59a protein_coding protein_coding MGP_LPJ_T0056347.1 MGP_LPJ_G0026153.1 mouse_genomes_project 2 106253289 106274233 + Cd59a protein_coding processed_transcript MGP_LPJ_T0013537.1 MGP_LPJ_G0011628.1 mouse_genomes_project 2 61477141 61477460 - processed_pseudogene processed_pseudogene MGP_LPJ_T0054550.1 MGP_LPJ_G0025652.1 mouse_genomes_project 2 48015335 48352277 + MGP_LPJ_P0054550 Mbd5 protein_coding protein_coding MGP_LPJ_T0054551.1 MGP_LPJ_G0025652.1 mouse_genomes_project 2 48015345 48188482 + Mbd5 protein_coding processed_transcript MGP_LPJ_T0054552.1 MGP_LPJ_G0025652.1 mouse_genomes_project 2 48015350 48419893 + MGP_LPJ_P0054552 Mbd5 protein_coding protein_coding MGP_LPJ_T0054553.1 MGP_LPJ_G0025652.1 mouse_genomes_project 2 48015789 48091530 + Mbd5 protein_coding processed_transcript MGP_LPJ_T0054554.1 MGP_LPJ_G0025652.1 mouse_genomes_project 2 48015790 48020744 + Mbd5 protein_coding processed_transcript MGP_LPJ_T0054555.1 MGP_LPJ_G0025652.1 mouse_genomes_project 2 48015892 48188346 + Mbd5 protein_coding processed_transcript MGP_LPJ_T0054556.1 MGP_LPJ_G0025652.1 mouse_genomes_project 2 48015970 48336714 + Mbd5 protein_coding processed_transcript MGP_LPJ_T0054557.1 MGP_LPJ_G0025652.1 mouse_genomes_project 2 48015976 48136120 + Mbd5 protein_coding processed_transcript MGP_LPJ_T0054558.1 MGP_LPJ_G0025652.1 mouse_genomes_project 2 48337125 48422628 + MGP_LPJ_P0054558 Mbd5 protein_coding protein_coding MGP_LPJ_T0054559.1 MGP_LPJ_G0025652.1 mouse_genomes_project 2 48337326 48363844 + MGP_LPJ_P0054559 Mbd5 protein_coding protein_coding MGP_LPJ_T0054560.1 MGP_LPJ_G0025652.1 mouse_genomes_project 2 48348279 48419919 + MGP_LPJ_P0054560 Mbd5 protein_coding protein_coding MGP_LPJ_T0054561.1 MGP_LPJ_G0025652.1 mouse_genomes_project 2 48363948 48428343 + MGP_LPJ_P0054561 Mbd5 protein_coding nonsense_mediated_decay MGP_LPJ_T0054562.1 MGP_LPJ_G0025652.1 mouse_genomes_project 2 48379690 48419573 + MGP_LPJ_P0054562 Mbd5 protein_coding nonsense_mediated_decay MGP_LPJ_T0054563.1 MGP_LPJ_G0025652.1 mouse_genomes_project 2 48379691 48419584 + MGP_LPJ_P0054563 Mbd5 protein_coding nonsense_mediated_decay MGP_LPJ_T0054564.1 MGP_LPJ_G0025652.1 mouse_genomes_project 2 48379839 48419807 + MGP_LPJ_P0054564 Mbd5 protein_coding protein_coding MGP_LPJ_T0055656.1 MGP_LPJ_G0025939.1 mouse_genomes_project 2 88231976 88272272 + MGP_LPJ_P0055656 Olfr1115 protein_coding protein_coding MGP_LPJ_T0013746.1 MGP_LPJ_G0011837.1 mouse_genomes_project 2 146746252 146747182 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013548.1 MGP_LPJ_G0011639.1 mouse_genomes_project 2 67833658 67834197 + processed_pseudogene processed_pseudogene MGP_LPJ_T0059382.1 MGP_LPJ_G0026881.1 mouse_genomes_project 2 178579990 178581802 + MGP_LPJ_P0059382 Fam209 protein_coding protein_coding MGP_LPJ_T0013500.1 MGP_LPJ_G0011591.1 mouse_genomes_project 2 50779094 50779329 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100592.1 MGP_LPJ_G0038855.1 mouse_genomes_project 2 64992461 64992575 - Gm24138 snoRNA snoRNA MGP_LPJ_T0007180.1 MGP_LPJ_G0005890.1 mouse_genomes_project 2 26308282 26319089 - Gm13373 lincRNA lincRNA MGP_LPJ_T0003900.1 MGP_LPJ_G0003491.1 mouse_genomes_project 2 1616062 1617329 - Gm13179 antisense antisense MGP_LPJ_T0003901.1 MGP_LPJ_G0003491.1 mouse_genomes_project 2 1616366 1617329 - Gm13179 antisense antisense MGP_LPJ_T0057392.1 MGP_LPJ_G0026405.1 mouse_genomes_project 2 131280462 131331625 - MGP_LPJ_P0057392 Nphp1 protein_coding protein_coding MGP_LPJ_T0057393.1 MGP_LPJ_G0026405.1 mouse_genomes_project 2 131280464 131284256 - Nphp1 protein_coding processed_transcript MGP_LPJ_T0057394.1 MGP_LPJ_G0026405.1 mouse_genomes_project 2 131280466 131331668 - MGP_LPJ_P0057394 Nphp1 protein_coding protein_coding MGP_LPJ_T0057395.1 MGP_LPJ_G0026405.1 mouse_genomes_project 2 131285331 131293556 - Nphp1 protein_coding retained_intron MGP_LPJ_T0007222.1 MGP_LPJ_G0005924.1 mouse_genomes_project 2 59551802 59552526 + Gm13620 lincRNA lincRNA MGP_LPJ_T0010354.1 MGP_LPJ_G0008472.1 mouse_genomes_project 2 7725766 7725887 + Mir669f miRNA miRNA MGP_LPJ_T0004135.1 MGP_LPJ_G0003658.1 mouse_genomes_project 2 150629018 150636893 + A930019D19Rik antisense antisense MGP_LPJ_T0010435.1 MGP_LPJ_G0008553.1 mouse_genomes_project 2 51489391 51489541 + Gm22095 miRNA miRNA MGP_LPJ_T0054275.1 MGP_LPJ_G0025585.1 mouse_genomes_project 2 33932547 33954120 - MGP_LPJ_P0054275 4930402F06Rik protein_coding protein_coding MGP_LPJ_T0054276.1 MGP_LPJ_G0025585.1 mouse_genomes_project 2 33932567 33954002 - MGP_LPJ_P0054276 4930402F06Rik protein_coding protein_coding MGP_LPJ_T0054325.1 MGP_LPJ_G0025594.1 mouse_genomes_project 2 34844050 34865788 + MGP_LPJ_P0054325 Ptgs1 protein_coding protein_coding MGP_LPJ_T0054326.1 MGP_LPJ_G0025594.1 mouse_genomes_project 2 34844180 34851593 + Ptgs1 protein_coding processed_transcript MGP_LPJ_T0054327.1 MGP_LPJ_G0025594.1 mouse_genomes_project 2 34849778 34865785 + Ptgs1 protein_coding processed_transcript MGP_LPJ_T0054328.1 MGP_LPJ_G0025594.1 mouse_genomes_project 2 34854242 34854998 + Ptgs1 protein_coding retained_intron MGP_LPJ_T0054329.1 MGP_LPJ_G0025594.1 mouse_genomes_project 2 34856004 34858735 + Ptgs1 protein_coding retained_intron MGP_LPJ_T0057340.1 MGP_LPJ_G0026391.1 mouse_genomes_project 2 130750972 130758141 - MGP_LPJ_P0057340 Ciao1 protein_coding protein_coding MGP_LPJ_T0057341.1 MGP_LPJ_G0026391.1 mouse_genomes_project 2 130753379 130756567 - Ciao1 protein_coding retained_intron MGP_LPJ_T0057342.1 MGP_LPJ_G0026391.1 mouse_genomes_project 2 130753506 130758141 - MGP_LPJ_P0057342 Ciao1 protein_coding protein_coding MGP_LPJ_T0057343.1 MGP_LPJ_G0026391.1 mouse_genomes_project 2 130756376 130758141 - MGP_LPJ_P0057343 Ciao1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053635.1 MGP_LPJ_G0025491.1 mouse_genomes_project 2 28366917 28409407 + MGP_LPJ_P0053635 protein_coding nonsense_mediated_decay MGP_LPJ_T0054957.1 MGP_LPJ_G0025726.1 mouse_genomes_project 2 68928088 68984395 + MGP_LPJ_P0054957 Nostrin protein_coding protein_coding MGP_LPJ_T0054958.1 MGP_LPJ_G0025726.1 mouse_genomes_project 2 68973804 68980613 + Nostrin protein_coding processed_transcript MGP_LPJ_T0055222.1 MGP_LPJ_G0025775.1 mouse_genomes_project 2 74695178 74754423 - MGP_LPJ_P0055222 protein_coding protein_coding MGP_LPJ_T0055223.1 MGP_LPJ_G0025775.1 mouse_genomes_project 2 74695221 74754423 - MGP_LPJ_P0055223 protein_coding protein_coding MGP_LPJ_T0055224.1 MGP_LPJ_G0025775.1 mouse_genomes_project 2 74695228 74707990 - protein_coding processed_transcript MGP_LPJ_T0055225.1 MGP_LPJ_G0025775.1 mouse_genomes_project 2 74696220 74754406 - protein_coding processed_transcript MGP_LPJ_T0055226.1 MGP_LPJ_G0025775.1 mouse_genomes_project 2 74696927 74753699 - MGP_LPJ_P0055226 protein_coding protein_coding MGP_LPJ_T0055227.1 MGP_LPJ_G0025775.1 mouse_genomes_project 2 74706792 74754854 - MGP_LPJ_P0055227 protein_coding protein_coding MGP_LPJ_T0055228.1 MGP_LPJ_G0025775.1 mouse_genomes_project 2 74712751 74753992 - MGP_LPJ_P0055228 protein_coding protein_coding MGP_LPJ_T0055229.1 MGP_LPJ_G0025775.1 mouse_genomes_project 2 74724060 74754910 - protein_coding processed_transcript MGP_LPJ_T0055230.1 MGP_LPJ_G0025775.1 mouse_genomes_project 2 74727099 74754391 - protein_coding processed_transcript MGP_LPJ_T0055231.1 MGP_LPJ_G0025775.1 mouse_genomes_project 2 74744607 74754355 - protein_coding processed_transcript MGP_LPJ_T0055232.1 MGP_LPJ_G0025775.1 mouse_genomes_project 2 74746582 74754369 - MGP_LPJ_P0055232 protein_coding protein_coding MGP_LPJ_T0013611.1 MGP_LPJ_G0011702.1 mouse_genomes_project 2 88342107 88342513 + processed_pseudogene processed_pseudogene MGP_LPJ_T0058360.1 MGP_LPJ_G0026659.1 mouse_genomes_project 2 159490129 159528612 + MGP_LPJ_P0058360 Zfp341 protein_coding protein_coding MGP_LPJ_T0058361.1 MGP_LPJ_G0026659.1 mouse_genomes_project 2 159490188 159528569 + MGP_LPJ_P0058361 Zfp341 protein_coding nonsense_mediated_decay MGP_LPJ_T0058362.1 MGP_LPJ_G0026659.1 mouse_genomes_project 2 159490202 159528569 + MGP_LPJ_P0058362 Zfp341 protein_coding protein_coding MGP_LPJ_T0010362.1 MGP_LPJ_G0008480.1 mouse_genomes_project 2 7730490 7730584 + Mir466f-3 miRNA miRNA MGP_LPJ_T0102018.1 MGP_LPJ_G0040055.1 mouse_genomes_project 2 37646406 37650632 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0004017.1 MGP_LPJ_G0003580.1 mouse_genomes_project 2 72312331 72315946 - Rapgef4os3 antisense antisense MGP_LPJ_T0004056.1 MGP_LPJ_G0003606.1 mouse_genomes_project 2 104116284 104119861 + Gm13920 antisense antisense MGP_LPJ_T0013836.1 MGP_LPJ_G0011927.1 mouse_genomes_project 2 180868721 180869294 + processed_pseudogene processed_pseudogene MGP_LPJ_T0053458.1 MGP_LPJ_G0025466.1 mouse_genomes_project 2 26957011 27094385 - MGP_LPJ_P0053458 Cfap77 protein_coding unknown_likely_coding MGP_LPJ_T0053459.1 MGP_LPJ_G0025466.1 mouse_genomes_project 2 26957016 27075625 - Cfap77 protein_coding processed_transcript MGP_LPJ_T0053460.1 MGP_LPJ_G0025466.1 mouse_genomes_project 2 26985936 27094443 - MGP_LPJ_P0053460 Cfap77 protein_coding protein_coding MGP_LPJ_T0053461.1 MGP_LPJ_G0025466.1 mouse_genomes_project 2 27091289 27094436 - Cfap77 protein_coding processed_transcript MGP_LPJ_T0011506.1 MGP_LPJ_G0009624.1 mouse_genomes_project 2 22362749 22363074 + Gm25455 misc_RNA misc_RNA MGP_LPJ_T0055977.1 MGP_LPJ_G0026088.1 mouse_genomes_project 2 92804219 92989747 - MGP_LPJ_P0055977 1110051M20Rik protein_coding protein_coding MGP_LPJ_T0055978.1 MGP_LPJ_G0026088.1 mouse_genomes_project 2 92807142 92989739 - MGP_LPJ_P0055978 1110051M20Rik protein_coding protein_coding MGP_LPJ_T0055979.1 MGP_LPJ_G0026088.1 mouse_genomes_project 2 92810584 92811984 - 1110051M20Rik protein_coding processed_transcript MGP_LPJ_T0055980.1 MGP_LPJ_G0026088.1 mouse_genomes_project 2 92837796 92989768 - 1110051M20Rik protein_coding processed_transcript MGP_LPJ_T0055981.1 MGP_LPJ_G0026088.1 mouse_genomes_project 2 92922162 92989794 - 1110051M20Rik protein_coding processed_transcript MGP_LPJ_T0055982.1 MGP_LPJ_G0026088.1 mouse_genomes_project 2 92963875 92989762 - 1110051M20Rik protein_coding processed_transcript MGP_LPJ_T0055983.1 MGP_LPJ_G0026088.1 mouse_genomes_project 2 92963924 92989829 - 1110051M20Rik protein_coding processed_transcript MGP_LPJ_T0054032.1 MGP_LPJ_G0025548.1 mouse_genomes_project 2 31037827 31050600 - MGP_LPJ_P0054032 Fpgs protein_coding protein_coding MGP_LPJ_T0054033.1 MGP_LPJ_G0025548.1 mouse_genomes_project 2 31037828 31050550 - Fpgs protein_coding retained_intron MGP_LPJ_T0054034.1 MGP_LPJ_G0025548.1 mouse_genomes_project 2 31038035 31041175 - Fpgs protein_coding retained_intron MGP_LPJ_T0054035.1 MGP_LPJ_G0025548.1 mouse_genomes_project 2 31038520 31040223 - Fpgs protein_coding processed_transcript MGP_LPJ_T0054036.1 MGP_LPJ_G0025548.1 mouse_genomes_project 2 31041720 31042721 - Fpgs protein_coding retained_intron MGP_LPJ_T0054037.1 MGP_LPJ_G0025548.1 mouse_genomes_project 2 31042067 31060683 - MGP_LPJ_P0054037 Fpgs protein_coding nonsense_mediated_decay MGP_LPJ_T0054038.1 MGP_LPJ_G0025548.1 mouse_genomes_project 2 31042232 31043056 - Fpgs protein_coding retained_intron MGP_LPJ_T0054039.1 MGP_LPJ_G0025548.1 mouse_genomes_project 2 31042634 31060691 - MGP_LPJ_P0054039 Fpgs protein_coding protein_coding MGP_LPJ_T0054040.1 MGP_LPJ_G0025548.1 mouse_genomes_project 2 31048865 31049659 - Fpgs protein_coding retained_intron MGP_LPJ_T0054041.1 MGP_LPJ_G0025548.1 mouse_genomes_project 2 31049127 31060577 - MGP_LPJ_P0054041 Fpgs protein_coding protein_coding MGP_LPJ_T0054359.1 MGP_LPJ_G0025622.1 mouse_genomes_project 2 35919605 35920589 + MGP_LPJ_P0054359 Olfr368 protein_coding protein_coding MGP_LPJ_T0004022.1 MGP_LPJ_G0003584.1 mouse_genomes_project 2 73571604 73578822 + Gm13707 antisense antisense MGP_LPJ_T0010502.1 MGP_LPJ_G0008620.1 mouse_genomes_project 2 174505832 174505896 - Mir7004 miRNA miRNA MGP_LPJ_T0055792.1 MGP_LPJ_G0026051.1 mouse_genomes_project 2 91202312 91208066 - MGP_LPJ_P0055792 Olfr1256 protein_coding protein_coding MGP_LPJ_T0055793.1 MGP_LPJ_G0026051.1 mouse_genomes_project 2 91202312 91203233 - MGP_LPJ_P0055793 Olfr1256 protein_coding protein_coding MGP_LPJ_T0055625.1 MGP_LPJ_G0025909.1 mouse_genomes_project 2 87256248 87257131 - MGP_LPJ_P0055625 protein_coding protein_coding MGP_LPJ_T0100567.1 MGP_LPJ_G0038830.1 mouse_genomes_project 2 24545240 24545372 - Snora17 snoRNA snoRNA MGP_LPJ_T0054634.1 MGP_LPJ_G0025667.1 mouse_genomes_project 2 51936015 51986359 - MGP_LPJ_P0054634 Stam2 protein_coding protein_coding MGP_LPJ_T0054635.1 MGP_LPJ_G0025667.1 mouse_genomes_project 2 51942321 51986440 - MGP_LPJ_P0054635 Stam2 protein_coding protein_coding MGP_LPJ_T0054636.1 MGP_LPJ_G0025667.1 mouse_genomes_project 2 51952216 51986339 - Stam2 protein_coding retained_intron MGP_LPJ_T0054637.1 MGP_LPJ_G0025667.1 mouse_genomes_project 2 51952498 51986349 - MGP_LPJ_P0054637 Stam2 protein_coding nonsense_mediated_decay MGP_LPJ_T0054638.1 MGP_LPJ_G0025667.1 mouse_genomes_project 2 51964657 51986315 - MGP_LPJ_P0054638 Stam2 protein_coding protein_coding MGP_LPJ_T0053636.1 MGP_LPJ_G0025492.1 mouse_genomes_project 2 28392562 28409407 + MGP_LPJ_P0053636 Phyhd1 protein_coding protein_coding MGP_LPJ_T0053637.1 MGP_LPJ_G0025492.1 mouse_genomes_project 2 28392888 28409408 + MGP_LPJ_P0053637 Phyhd1 protein_coding protein_coding MGP_LPJ_T0053638.1 MGP_LPJ_G0025492.1 mouse_genomes_project 2 28393080 28409407 + MGP_LPJ_P0053638 Phyhd1 protein_coding protein_coding MGP_LPJ_T0053639.1 MGP_LPJ_G0025492.1 mouse_genomes_project 2 28393094 28408326 + MGP_LPJ_P0053639 Phyhd1 protein_coding protein_coding MGP_LPJ_T0053640.1 MGP_LPJ_G0025492.1 mouse_genomes_project 2 28393178 28407505 + MGP_LPJ_P0053640 Phyhd1 protein_coding protein_coding MGP_LPJ_T0053641.1 MGP_LPJ_G0025492.1 mouse_genomes_project 2 28393208 28409396 + MGP_LPJ_P0053641 Phyhd1 protein_coding protein_coding MGP_LPJ_T0053642.1 MGP_LPJ_G0025492.1 mouse_genomes_project 2 28393210 28406786 + Phyhd1 protein_coding processed_transcript MGP_LPJ_T0053643.1 MGP_LPJ_G0025492.1 mouse_genomes_project 2 28393215 28408374 + MGP_LPJ_P0053643 Phyhd1 protein_coding protein_coding MGP_LPJ_T0053644.1 MGP_LPJ_G0025492.1 mouse_genomes_project 2 28393222 28409357 + MGP_LPJ_P0053644 Phyhd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053645.1 MGP_LPJ_G0025492.1 mouse_genomes_project 2 28393222 28409357 + MGP_LPJ_P0053645 Phyhd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053646.1 MGP_LPJ_G0025492.1 mouse_genomes_project 2 28404266 28409399 + MGP_LPJ_P0053646 Phyhd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053647.1 MGP_LPJ_G0025492.1 mouse_genomes_project 2 28406890 28409113 + Phyhd1 protein_coding retained_intron MGP_LPJ_T0053648.1 MGP_LPJ_G0025492.1 mouse_genomes_project 2 28406937 28407770 + Phyhd1 protein_coding retained_intron MGP_LPJ_T0056522.1 MGP_LPJ_G0026209.1 mouse_genomes_project 2 114436915 114437863 + MGP_LPJ_P0056522 Olfr1302 protein_coding protein_coding MGP_LPJ_T0003972.1 MGP_LPJ_G0003546.1 mouse_genomes_project 2 32772798 32792707 + C79798 antisense antisense MGP_LPJ_T0099373.1 MGP_LPJ_G0037636.1 mouse_genomes_project 2 188135313 188135476 + Gm25184 snRNA snRNA MGP_LPJ_T0007208.1 MGP_LPJ_G0005912.1 mouse_genomes_project 2 47098681 47506777 - lincRNA lincRNA MGP_LPJ_T0054877.1 MGP_LPJ_G0025709.1 mouse_genomes_project 2 64929230 64979439 - MGP_LPJ_P0054877 Slc38a11 protein_coding protein_coding MGP_LPJ_T0054878.1 MGP_LPJ_G0025709.1 mouse_genomes_project 2 64929285 64979895 - MGP_LPJ_P0054878 Slc38a11 protein_coding protein_coding MGP_LPJ_T0054879.1 MGP_LPJ_G0025709.1 mouse_genomes_project 2 64934915 64980010 - MGP_LPJ_P0054879 Slc38a11 protein_coding protein_coding MGP_LPJ_T0054880.1 MGP_LPJ_G0025709.1 mouse_genomes_project 2 64965462 64980010 - Slc38a11 protein_coding processed_transcript MGP_LPJ_T0054881.1 MGP_LPJ_G0025709.1 mouse_genomes_project 2 64966026 64979976 - MGP_LPJ_P0054881 Slc38a11 protein_coding protein_coding MGP_LPJ_T0054882.1 MGP_LPJ_G0025709.1 mouse_genomes_project 2 64968875 64979899 - Slc38a11 protein_coding processed_transcript MGP_LPJ_T0054883.1 MGP_LPJ_G0025709.1 mouse_genomes_project 2 64970782 64980006 - Slc38a11 protein_coding processed_transcript MGP_LPJ_T0013626.1 MGP_LPJ_G0011717.1 mouse_genomes_project 2 92878653 92878821 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100630.1 MGP_LPJ_G0038893.1 mouse_genomes_project 2 155895687 155895823 - Gm23005 snoRNA snoRNA MGP_LPJ_T0003945.1 MGP_LPJ_G0003524.1 mouse_genomes_project 2 25062397 25079931 - Dbhos antisense antisense MGP_LPJ_T0059222.1 MGP_LPJ_G0026840.1 mouse_genomes_project 2 172739186 172758564 + MGP_LPJ_P0059222 Ddx27 protein_coding protein_coding MGP_LPJ_T0059223.1 MGP_LPJ_G0026840.1 mouse_genomes_project 2 172739303 172749655 + MGP_LPJ_P0059223 Ddx27 protein_coding protein_coding MGP_LPJ_T0059224.1 MGP_LPJ_G0026840.1 mouse_genomes_project 2 172739303 172748373 + MGP_LPJ_P0059224 Ddx27 protein_coding protein_coding MGP_LPJ_T0059225.1 MGP_LPJ_G0026840.1 mouse_genomes_project 2 172750042 172751704 + Ddx27 protein_coding retained_intron MGP_LPJ_T0059226.1 MGP_LPJ_G0026840.1 mouse_genomes_project 2 172751383 172752132 + Ddx27 protein_coding retained_intron MGP_LPJ_T0059227.1 MGP_LPJ_G0026840.1 mouse_genomes_project 2 172757463 172758520 + Ddx27 protein_coding retained_intron MGP_LPJ_T0057469.1 MGP_LPJ_G0026428.1 mouse_genomes_project 2 133251215 133268689 + Sirpa protein_coding processed_transcript MGP_LPJ_T0057470.1 MGP_LPJ_G0026428.1 mouse_genomes_project 2 133251219 133268692 + Sirpa protein_coding processed_transcript MGP_LPJ_T0057471.1 MGP_LPJ_G0026428.1 mouse_genomes_project 2 133251219 133274096 + MGP_LPJ_P0057471 Sirpa protein_coding protein_coding MGP_LPJ_T0057472.1 MGP_LPJ_G0026428.1 mouse_genomes_project 2 133251219 133290051 + MGP_LPJ_P0057472 Sirpa protein_coding protein_coding MGP_LPJ_T0057473.1 MGP_LPJ_G0026428.1 mouse_genomes_project 2 133251219 133290051 + MGP_LPJ_P0057473 Sirpa protein_coding protein_coding MGP_LPJ_T0057474.1 MGP_LPJ_G0026428.1 mouse_genomes_project 2 133251245 133268881 + Sirpa protein_coding processed_transcript MGP_LPJ_T0057475.1 MGP_LPJ_G0026428.1 mouse_genomes_project 2 133251294 133290059 + MGP_LPJ_P0057475 Sirpa protein_coding protein_coding MGP_LPJ_T0057476.1 MGP_LPJ_G0026428.1 mouse_genomes_project 2 133251575 133290051 + MGP_LPJ_P0057476 Sirpa protein_coding protein_coding MGP_LPJ_T0057477.1 MGP_LPJ_G0026428.1 mouse_genomes_project 2 133251585 133290059 + MGP_LPJ_P0057477 Sirpa protein_coding protein_coding MGP_LPJ_T0057478.1 MGP_LPJ_G0026428.1 mouse_genomes_project 2 133251935 133290059 + MGP_LPJ_P0057478 Sirpa protein_coding protein_coding MGP_LPJ_T0057479.1 MGP_LPJ_G0026428.1 mouse_genomes_project 2 133251942 133288420 + Sirpa protein_coding processed_transcript MGP_LPJ_T0057480.1 MGP_LPJ_G0026428.1 mouse_genomes_project 2 133251948 133288128 + MGP_LPJ_P0057480 Sirpa protein_coding protein_coding MGP_LPJ_T0057481.1 MGP_LPJ_G0026428.1 mouse_genomes_project 2 133251993 133288015 + MGP_LPJ_P0057481 Sirpa protein_coding protein_coding MGP_LPJ_T0057482.1 MGP_LPJ_G0026428.1 mouse_genomes_project 2 133278526 133285875 + Sirpa protein_coding retained_intron MGP_LPJ_T0007399.1 MGP_LPJ_G0006069.1 mouse_genomes_project 2 170089826 170099662 + Gm14317 lincRNA lincRNA MGP_LPJ_T0059672.1 MGP_LPJ_G0026950.1 mouse_genomes_project 2 187915177 187923349 - MGP_LPJ_P0059672 Stmn3 protein_coding protein_coding MGP_LPJ_T0054654.1 MGP_LPJ_G0025672.1 mouse_genomes_project 2 53702332 54439097 + MGP_LPJ_P0054654 Galnt13 protein_coding protein_coding MGP_LPJ_T0054655.1 MGP_LPJ_G0025672.1 mouse_genomes_project 2 53702402 54439097 + MGP_LPJ_P0054655 Galnt13 protein_coding protein_coding MGP_LPJ_T0054656.1 MGP_LPJ_G0025672.1 mouse_genomes_project 2 53702402 54439097 + MGP_LPJ_P0054656 Galnt13 protein_coding protein_coding MGP_LPJ_T0054657.1 MGP_LPJ_G0025672.1 mouse_genomes_project 2 53702506 54025433 + MGP_LPJ_P0054657 Galnt13 protein_coding protein_coding MGP_LPJ_T0054658.1 MGP_LPJ_G0025672.1 mouse_genomes_project 2 53793499 54433875 + MGP_LPJ_P0054658 Galnt13 protein_coding protein_coding MGP_LPJ_T0099356.1 MGP_LPJ_G0037619.1 mouse_genomes_project 2 136869753 136869921 + Gm25704 snRNA snRNA MGP_LPJ_T0057382.1 MGP_LPJ_G0026402.1 mouse_genomes_project 2 131124751 131144359 + MGP_LPJ_P0057382 Mrps5 protein_coding protein_coding MGP_LPJ_T0057383.1 MGP_LPJ_G0026402.1 mouse_genomes_project 2 131124948 131142052 + Mrps5 protein_coding retained_intron MGP_LPJ_T0057384.1 MGP_LPJ_G0026402.1 mouse_genomes_project 2 131124948 131133587 + Mrps5 protein_coding retained_intron MGP_LPJ_T0057385.1 MGP_LPJ_G0026402.1 mouse_genomes_project 2 131127970 131133225 + MGP_LPJ_P0057385 Mrps5 protein_coding protein_coding MGP_LPJ_T0057386.1 MGP_LPJ_G0026402.1 mouse_genomes_project 2 131133202 131135906 + Mrps5 protein_coding retained_intron MGP_LPJ_T0057387.1 MGP_LPJ_G0026402.1 mouse_genomes_project 2 131137355 131141385 + Mrps5 protein_coding retained_intron MGP_LPJ_T0057388.1 MGP_LPJ_G0026402.1 mouse_genomes_project 2 131137562 131138775 + Mrps5 protein_coding retained_intron MGP_LPJ_T0100607.1 MGP_LPJ_G0038870.1 mouse_genomes_project 2 114505658 114505789 + Gm26421 snoRNA snoRNA MGP_LPJ_T0017789.1 MGP_LPJ_G0015374.1 mouse_genomes_project 2 121251108 121278180 - Gm29232 processed_transcript processed_transcript MGP_LPJ_T0055247.1 MGP_LPJ_G0025785.1 mouse_genomes_project 2 74904878 74926146 + MGP_LPJ_P0055247 Gm28230 protein_coding nonsense_mediated_decay MGP_LPJ_T0013447.1 MGP_LPJ_G0011538.1 mouse_genomes_project 2 30739643 30740183 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004192.1 MGP_LPJ_G0003705.1 mouse_genomes_project 2 176501319 176519233 - Gm16796 antisense antisense MGP_LPJ_T0059239.1 MGP_LPJ_G0026843.1 mouse_genomes_project 2 172828196 172920375 - MGP_LPJ_P0059239 Kcnb1 protein_coding protein_coding MGP_LPJ_T0013388.1 MGP_LPJ_G0011479.1 mouse_genomes_project 2 8188423 8188844 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101661.1 MGP_LPJ_G0026955.1 mouse_genomes_project 2 187997296 188000730 + unitary_pseudogene processed_transcript MGP_LPJ_T0101662.1 MGP_LPJ_G0026955.1 mouse_genomes_project 2 187997457 188000343 + unitary_pseudogene unitary_pseudogene MGP_LPJ_T0100614.1 MGP_LPJ_G0038877.1 mouse_genomes_project 2 133762927 133763056 + Gm24665 snoRNA snoRNA MGP_LPJ_T0004071.1 MGP_LPJ_G0003613.1 mouse_genomes_project 2 116157748 116217373 - Gm13963 antisense antisense MGP_LPJ_T0100579.1 MGP_LPJ_G0038842.1 mouse_genomes_project 2 39012783 39012909 + Gm24467 snoRNA snoRNA MGP_LPJ_T0004066.1 MGP_LPJ_G0003610.1 mouse_genomes_project 2 107833106 107973084 - Pax6os1 antisense antisense MGP_LPJ_T0004067.1 MGP_LPJ_G0003610.1 mouse_genomes_project 2 107833946 107973034 - Pax6os1 antisense antisense MGP_LPJ_T0053397.1 MGP_LPJ_G0025453.1 mouse_genomes_project 2 26478390 26481505 + MGP_LPJ_P0053397 Mrps2 protein_coding protein_coding MGP_LPJ_T0053398.1 MGP_LPJ_G0025453.1 mouse_genomes_project 2 26478406 26481492 + Mrps2 protein_coding processed_transcript MGP_LPJ_T0053399.1 MGP_LPJ_G0025453.1 mouse_genomes_project 2 26478414 26481492 + Mrps2 protein_coding processed_transcript MGP_LPJ_T0058399.1 MGP_LPJ_G0026668.1 mouse_genomes_project 2 160228886 160230663 + MGP_LPJ_P0058399 Map1lc3a protein_coding protein_coding MGP_LPJ_T0058400.1 MGP_LPJ_G0026668.1 mouse_genomes_project 2 160229132 160230660 + Map1lc3a protein_coding processed_transcript MGP_LPJ_T0058401.1 MGP_LPJ_G0026668.1 mouse_genomes_project 2 160229478 160230658 + Map1lc3a protein_coding processed_transcript MGP_LPJ_T0058376.1 MGP_LPJ_G0026663.1 mouse_genomes_project 2 159691865 159981063 + MGP_LPJ_P0058376 a protein_coding protein_coding MGP_LPJ_T0058381.1 MGP_LPJ_G0026663.1 mouse_genomes_project 2 159874483 159984347 + MGP_LPJ_P0058381 a protein_coding protein_coding MGP_LPJ_T0058382.1 MGP_LPJ_G0026663.1 mouse_genomes_project 2 159960458 159983968 + MGP_LPJ_P0058382 a protein_coding protein_coding MGP_LPJ_T0058383.1 MGP_LPJ_G0026663.1 mouse_genomes_project 2 159960517 159984348 + MGP_LPJ_P0058383 a protein_coding protein_coding MGP_LPJ_T0058384.1 MGP_LPJ_G0026663.1 mouse_genomes_project 2 159980950 159984347 + a protein_coding retained_intron MGP_LPJ_T0013791.1 MGP_LPJ_G0011882.1 mouse_genomes_project 2 160515922 160516213 + processed_pseudogene processed_pseudogene MGP_LPJ_T0057463.1 MGP_LPJ_G0026424.1 mouse_genomes_project 2 132891619 132923661 - MGP_LPJ_P0057463 Ckap2l protein_coding protein_coding MGP_LPJ_T0004104.1 MGP_LPJ_G0003637.1 mouse_genomes_project 2 133221601 133222623 - Gm14041 antisense antisense MGP_LPJ_T0058153.1 MGP_LPJ_G0026592.1 mouse_genomes_project 2 157034214 157040732 - MGP_LPJ_P0058153 Trib3 protein_coding protein_coding MGP_LPJ_T0058154.1 MGP_LPJ_G0026592.1 mouse_genomes_project 2 157036544 157040688 - Trib3 protein_coding processed_transcript MGP_LPJ_T0058155.1 MGP_LPJ_G0026592.1 mouse_genomes_project 2 157039665 157040670 - Trib3 protein_coding retained_intron MGP_LPJ_T0013824.1 MGP_LPJ_G0011915.1 mouse_genomes_project 2 172817822 172818020 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007321.1 MGP_LPJ_G0006004.1 mouse_genomes_project 2 120381459 120386181 - Gm13982 lincRNA lincRNA MGP_LPJ_T0056650.1 MGP_LPJ_G0026251.1 mouse_genomes_project 2 121485717 121490484 - MGP_LPJ_P0056650 Srp14 protein_coding protein_coding MGP_LPJ_T0056651.1 MGP_LPJ_G0026251.1 mouse_genomes_project 2 121485718 121489610 - Srp14 protein_coding processed_transcript MGP_LPJ_T0056652.1 MGP_LPJ_G0026251.1 mouse_genomes_project 2 121485728 121490421 - Srp14 protein_coding processed_transcript MGP_LPJ_T0056653.1 MGP_LPJ_G0026251.1 mouse_genomes_project 2 121489291 121490408 - MGP_LPJ_P0056653 Srp14 protein_coding protein_coding MGP_LPJ_T0057280.1 MGP_LPJ_G0026380.1 mouse_genomes_project 2 130111785 130161896 - MGP_LPJ_P0057280 Gabpb1 protein_coding protein_coding MGP_LPJ_T0057281.1 MGP_LPJ_G0026380.1 mouse_genomes_project 2 130113256 130161830 - MGP_LPJ_P0057281 Gabpb1 protein_coding protein_coding MGP_LPJ_T0057282.1 MGP_LPJ_G0026380.1 mouse_genomes_project 2 130113258 130161872 - MGP_LPJ_P0057282 Gabpb1 protein_coding protein_coding MGP_LPJ_T0057283.1 MGP_LPJ_G0026380.1 mouse_genomes_project 2 130122959 130162665 - MGP_LPJ_P0057283 Gabpb1 protein_coding protein_coding MGP_LPJ_T0057284.1 MGP_LPJ_G0026380.1 mouse_genomes_project 2 130123344 130161814 - MGP_LPJ_P0057284 Gabpb1 protein_coding protein_coding MGP_LPJ_T0057285.1 MGP_LPJ_G0026380.1 mouse_genomes_project 2 130132070 130161920 - MGP_LPJ_P0057285 Gabpb1 protein_coding protein_coding MGP_LPJ_T0057286.1 MGP_LPJ_G0026380.1 mouse_genomes_project 2 130136648 130161667 - Gabpb1 protein_coding processed_transcript MGP_LPJ_T0057287.1 MGP_LPJ_G0026380.1 mouse_genomes_project 2 130137937 130161680 - MGP_LPJ_P0057287 Gabpb1 protein_coding protein_coding MGP_LPJ_T0057288.1 MGP_LPJ_G0026380.1 mouse_genomes_project 2 130138014 130149069 - MGP_LPJ_P0057288 Gabpb1 protein_coding protein_coding MGP_LPJ_T0007452.1 MGP_LPJ_G0006115.1 mouse_genomes_project 2 187466729 187467845 + Gm27032 lincRNA lincRNA MGP_LPJ_T0102046.1 MGP_LPJ_G0040083.1 mouse_genomes_project 2 88980617 88981062 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0003902.1 MGP_LPJ_G0003492.1 mouse_genomes_project 2 2113312 2117164 + 4930551O13Rik antisense antisense MGP_LPJ_T0056642.1 MGP_LPJ_G0026250.1 mouse_genomes_project 2 121393201 121485101 + MGP_LPJ_P0056642 Eif2ak4 protein_coding protein_coding MGP_LPJ_T0056643.1 MGP_LPJ_G0026250.1 mouse_genomes_project 2 121393201 121434050 + MGP_LPJ_P0056643 Eif2ak4 protein_coding protein_coding MGP_LPJ_T0056644.1 MGP_LPJ_G0026250.1 mouse_genomes_project 2 121393292 121485109 + MGP_LPJ_P0056644 Eif2ak4 protein_coding protein_coding MGP_LPJ_T0056645.1 MGP_LPJ_G0026250.1 mouse_genomes_project 2 121393430 121485101 + MGP_LPJ_P0056645 Eif2ak4 protein_coding protein_coding MGP_LPJ_T0056646.1 MGP_LPJ_G0026250.1 mouse_genomes_project 2 121393695 121485099 + MGP_LPJ_P0056646 Eif2ak4 protein_coding protein_coding MGP_LPJ_T0056647.1 MGP_LPJ_G0026250.1 mouse_genomes_project 2 121393695 121485098 + MGP_LPJ_P0056647 Eif2ak4 protein_coding protein_coding MGP_LPJ_T0056648.1 MGP_LPJ_G0026250.1 mouse_genomes_project 2 121446037 121460222 + MGP_LPJ_P0056648 Eif2ak4 protein_coding protein_coding MGP_LPJ_T0056649.1 MGP_LPJ_G0026250.1 mouse_genomes_project 2 121465046 121470681 + Eif2ak4 protein_coding processed_transcript MGP_LPJ_T0007332.1 MGP_LPJ_G0006013.1 mouse_genomes_project 2 127596126 127602773 - 4930583P06Rik lincRNA lincRNA MGP_LPJ_T0054059.1 MGP_LPJ_G0025553.1 mouse_genomes_project 2 31123252 31128973 + MGP_LPJ_P0054059 Tor2a protein_coding protein_coding MGP_LPJ_T0054060.1 MGP_LPJ_G0025553.1 mouse_genomes_project 2 31123263 31128668 + MGP_LPJ_P0054060 Tor2a protein_coding protein_coding MGP_LPJ_T0054061.1 MGP_LPJ_G0025553.1 mouse_genomes_project 2 31123273 31128459 + MGP_LPJ_P0054061 Tor2a protein_coding nonsense_mediated_decay MGP_LPJ_T0054062.1 MGP_LPJ_G0025553.1 mouse_genomes_project 2 31123278 31128973 + MGP_LPJ_P0054062 Tor2a protein_coding nonsense_mediated_decay MGP_LPJ_T0054063.1 MGP_LPJ_G0025553.1 mouse_genomes_project 2 31123294 31128971 + Tor2a protein_coding retained_intron MGP_LPJ_T0054064.1 MGP_LPJ_G0025553.1 mouse_genomes_project 2 31123309 31124002 + Tor2a protein_coding processed_transcript MGP_LPJ_T0054065.1 MGP_LPJ_G0025553.1 mouse_genomes_project 2 31123337 31128323 + MGP_LPJ_P0054065 Tor2a protein_coding protein_coding MGP_LPJ_T0054066.1 MGP_LPJ_G0025553.1 mouse_genomes_project 2 31126310 31128518 + Tor2a protein_coding retained_intron MGP_LPJ_T0099370.1 MGP_LPJ_G0037633.1 mouse_genomes_project 2 187243350 187243457 + Gm22502 snRNA snRNA MGP_LPJ_T0013724.1 MGP_LPJ_G0011815.1 mouse_genomes_project 2 135166241 135166566 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055713.1 MGP_LPJ_G0025985.1 mouse_genomes_project 2 89385870 89386809 + MGP_LPJ_P0055713 Olfr1168 protein_coding protein_coding MGP_LPJ_T0056146.1 MGP_LPJ_G0026117.1 mouse_genomes_project 2 95366665 95538854 - MGP_LPJ_P0056146 Ext2 protein_coding protein_coding MGP_LPJ_T0056147.1 MGP_LPJ_G0026117.1 mouse_genomes_project 2 95402206 95538873 - MGP_LPJ_P0056147 Ext2 protein_coding protein_coding MGP_LPJ_T0056148.1 MGP_LPJ_G0026117.1 mouse_genomes_project 2 95402688 95411680 - Ext2 protein_coding retained_intron MGP_LPJ_T0056149.1 MGP_LPJ_G0026117.1 mouse_genomes_project 2 95402702 95538850 - MGP_LPJ_P0056149 Ext2 protein_coding nonsense_mediated_decay MGP_LPJ_T0056150.1 MGP_LPJ_G0026117.1 mouse_genomes_project 2 95409525 95414927 - MGP_LPJ_P0056150 Ext2 protein_coding protein_coding MGP_LPJ_T0056151.1 MGP_LPJ_G0026117.1 mouse_genomes_project 2 95410108 95411079 - MGP_LPJ_P0056151 Ext2 protein_coding protein_coding MGP_LPJ_T0056152.1 MGP_LPJ_G0026117.1 mouse_genomes_project 2 95423682 95538854 - Ext2 protein_coding processed_transcript MGP_LPJ_T0056153.1 MGP_LPJ_G0026117.1 mouse_genomes_project 2 95475012 95512163 - Ext2 protein_coding retained_intron MGP_LPJ_T0056154.1 MGP_LPJ_G0026117.1 mouse_genomes_project 2 95522625 95538870 - MGP_LPJ_P0056154 Ext2 protein_coding protein_coding MGP_LPJ_T0056155.1 MGP_LPJ_G0026117.1 mouse_genomes_project 2 95529629 95538850 - Ext2 protein_coding retained_intron MGP_LPJ_T0056156.1 MGP_LPJ_G0026117.1 mouse_genomes_project 2 95530054 95538853 - MGP_LPJ_P0056156 Ext2 protein_coding protein_coding MGP_LPJ_T0056157.1 MGP_LPJ_G0026117.1 mouse_genomes_project 2 95530439 95538858 - Ext2 protein_coding processed_transcript MGP_LPJ_T0013646.1 MGP_LPJ_G0011737.1 mouse_genomes_project 2 102272296 102272552 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099313.1 MGP_LPJ_G0037576.1 mouse_genomes_project 2 4493346 4493443 + Gm24340 snRNA snRNA MGP_LPJ_T0057990.1 MGP_LPJ_G0026543.1 mouse_genomes_project 2 152854720 152856144 + MGP_LPJ_P0057990 Sstr4 protein_coding protein_coding MGP_LPJ_T0013399.1 MGP_LPJ_G0011490.1 mouse_genomes_project 2 12775445 12776241 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013441.1 MGP_LPJ_G0011532.1 mouse_genomes_project 2 27558877 27559168 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004123.1 MGP_LPJ_G0003650.1 mouse_genomes_project 2 145349814 145406814 - Macrod2os1 antisense antisense MGP_LPJ_T0004108.1 MGP_LPJ_G0003641.1 mouse_genomes_project 2 135912327 135992884 + Gm14051 antisense antisense MGP_LPJ_T0098523.1 MGP_LPJ_G0036798.1 mouse_genomes_project 2 4064045 4066586 - Gm10855 sense_intronic sense_intronic MGP_LPJ_T0056514.1 MGP_LPJ_G0026201.1 mouse_genomes_project 2 114098538 114099477 + MGP_LPJ_P0056514 Olfr1288 protein_coding protein_coding MGP_LPJ_T0055787.1 MGP_LPJ_G0026047.1 mouse_genomes_project 2 90972700 90973523 - MGP_LPJ_P0055787 protein_coding protein_coding MGP_LPJ_T0052364.1 MGP_LPJ_G0025269.1 mouse_genomes_project 2 7324388 7362565 - MGP_LPJ_P0052364 Itih2 protein_coding protein_coding MGP_LPJ_T0052365.1 MGP_LPJ_G0025269.1 mouse_genomes_project 2 7340548 7362977 - MGP_LPJ_P0052365 Itih2 protein_coding protein_coding MGP_LPJ_T0052366.1 MGP_LPJ_G0025269.1 mouse_genomes_project 2 7358182 7363298 - MGP_LPJ_P0052366 Itih2 protein_coding protein_coding MGP_LPJ_T0013413.1 MGP_LPJ_G0011504.1 mouse_genomes_project 2 16188981 16189243 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004163.1 MGP_LPJ_G0003684.1 mouse_genomes_project 2 166147212 166196325 - Gm16751 antisense antisense MGP_LPJ_T0013796.1 MGP_LPJ_G0011887.1 mouse_genomes_project 2 161354994 161356844 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007265.1 MGP_LPJ_G0005960.1 mouse_genomes_project 2 83618300 83641381 - Gm28675 lincRNA lincRNA MGP_LPJ_T0055621.1 MGP_LPJ_G0025905.1 mouse_genomes_project 2 87157520 87158456 - MGP_LPJ_P0055621 Olfr1055 protein_coding protein_coding MGP_LPJ_T0098231.1 MGP_LPJ_G0036512.1 mouse_genomes_project 2 85185478 85185591 - n-R5s200 rRNA rRNA MGP_LPJ_T0057378.1 MGP_LPJ_G0026401.1 mouse_genomes_project 2 131112194 131124624 - MGP_LPJ_P0057378 Zfp661 protein_coding protein_coding MGP_LPJ_T0057379.1 MGP_LPJ_G0026401.1 mouse_genomes_project 2 131113065 131122197 - MGP_LPJ_P0057379 Zfp661 protein_coding protein_coding MGP_LPJ_T0057380.1 MGP_LPJ_G0026401.1 mouse_genomes_project 2 131113072 131122205 - MGP_LPJ_P0057380 Zfp661 protein_coding protein_coding MGP_LPJ_T0057381.1 MGP_LPJ_G0026401.1 mouse_genomes_project 2 131114467 131119033 - MGP_LPJ_P0057381 Zfp661 protein_coding protein_coding MGP_LPJ_T0058208.1 MGP_LPJ_G0026618.1 mouse_genomes_project 2 157689469 157699875 - MGP_LPJ_P0058208 Dusp15 protein_coding protein_coding MGP_LPJ_T0058209.1 MGP_LPJ_G0026618.1 mouse_genomes_project 2 157689494 157693029 - Dusp15 protein_coding retained_intron MGP_LPJ_T0058210.1 MGP_LPJ_G0026618.1 mouse_genomes_project 2 157693405 157700001 - MGP_LPJ_P0058210 Dusp15 protein_coding protein_coding MGP_LPJ_T0058211.1 MGP_LPJ_G0026618.1 mouse_genomes_project 2 157693449 157700117 - MGP_LPJ_P0058211 Dusp15 protein_coding protein_coding MGP_LPJ_T0058962.1 MGP_LPJ_G0026782.1 mouse_genomes_project 2 169846139 169847800 + MGP_LPJ_P0058962 Svs5 protein_coding protein_coding MGP_LPJ_T0058963.1 MGP_LPJ_G0026782.1 mouse_genomes_project 2 169846853 169847800 + MGP_LPJ_P0058963 Svs5 protein_coding protein_coding MGP_LPJ_T0057552.1 MGP_LPJ_G0026450.1 mouse_genomes_project 2 134343278 134348768 - MGP_LPJ_P0057552 Lzts3 protein_coding protein_coding MGP_LPJ_T0057553.1 MGP_LPJ_G0026450.1 mouse_genomes_project 2 134343278 134348768 - MGP_LPJ_P0057553 Lzts3 protein_coding protein_coding MGP_LPJ_T0057554.1 MGP_LPJ_G0026450.1 mouse_genomes_project 2 134343281 134354531 - MGP_LPJ_P0057554 Lzts3 protein_coding protein_coding MGP_LPJ_T0058951.1 MGP_LPJ_G0026774.1 mouse_genomes_project 2 169683964 169686764 - MGP_LPJ_P0058951 Wfdc12 protein_coding protein_coding MGP_LPJ_T0098238.1 MGP_LPJ_G0036519.1 mouse_genomes_project 2 123774349 123774474 - n-R5s205 rRNA rRNA MGP_LPJ_T0054026.1 MGP_LPJ_G0025547.1 mouse_genomes_project 2 31001604 31037337 + MGP_LPJ_P0054026 Eng protein_coding protein_coding MGP_LPJ_T0054027.1 MGP_LPJ_G0025547.1 mouse_genomes_project 2 31001604 31037877 + MGP_LPJ_P0054027 Eng protein_coding protein_coding MGP_LPJ_T0054028.1 MGP_LPJ_G0025547.1 mouse_genomes_project 2 31001631 31037888 + MGP_LPJ_P0054028 Eng protein_coding protein_coding MGP_LPJ_T0054029.1 MGP_LPJ_G0025547.1 mouse_genomes_project 2 31002002 31005377 + Eng protein_coding processed_transcript MGP_LPJ_T0054030.1 MGP_LPJ_G0025547.1 mouse_genomes_project 2 31028016 31028919 + Eng protein_coding retained_intron MGP_LPJ_T0054031.1 MGP_LPJ_G0025547.1 mouse_genomes_project 2 31028539 31036474 + MGP_LPJ_P0054031 Eng protein_coding protein_coding MGP_LPJ_T0010419.1 MGP_LPJ_G0008537.1 mouse_genomes_project 2 30481276 30481355 + Gm27805 miRNA miRNA MGP_LPJ_T0099312.1 MGP_LPJ_G0037575.1 mouse_genomes_project 2 2351378 2351565 - Gm23118 snRNA snRNA MGP_LPJ_T0099331.1 MGP_LPJ_G0037594.1 mouse_genomes_project 2 54307696 54307837 + Gm25489 snRNA snRNA MGP_LPJ_T0058186.1 MGP_LPJ_G0026612.1 mouse_genomes_project 2 157465548 157466707 + MGP_LPJ_P0058186 Id1 protein_coding protein_coding MGP_LPJ_T0058187.1 MGP_LPJ_G0026612.1 mouse_genomes_project 2 157465548 157466707 + MGP_LPJ_P0058187 Id1 protein_coding protein_coding MGP_LPJ_T0057860.1 MGP_LPJ_G0026516.1 mouse_genomes_project 2 148172369 148179449 - Rrbp1 protein_coding processed_transcript MGP_LPJ_T0057861.1 MGP_LPJ_G0026516.1 mouse_genomes_project 2 148172369 148238817 - MGP_LPJ_P0057861 Rrbp1 protein_coding protein_coding MGP_LPJ_T0057862.1 MGP_LPJ_G0026516.1 mouse_genomes_project 2 148173101 148174707 - Rrbp1 protein_coding processed_transcript MGP_LPJ_T0057863.1 MGP_LPJ_G0026516.1 mouse_genomes_project 2 148175462 148182348 - Rrbp1 protein_coding processed_transcript MGP_LPJ_T0057864.1 MGP_LPJ_G0026516.1 mouse_genomes_project 2 148183542 148184792 - Rrbp1 protein_coding processed_transcript MGP_LPJ_T0057865.1 MGP_LPJ_G0026516.1 mouse_genomes_project 2 148189144 148196013 - Rrbp1 protein_coding processed_transcript MGP_LPJ_T0057866.1 MGP_LPJ_G0026516.1 mouse_genomes_project 2 148193272 148211474 - Rrbp1 protein_coding processed_transcript MGP_LPJ_T0057867.1 MGP_LPJ_G0026516.1 mouse_genomes_project 2 148214165 148238817 - MGP_LPJ_P0057867 Rrbp1 protein_coding protein_coding MGP_LPJ_T0007135.1 MGP_LPJ_G0005857.1 mouse_genomes_project 2 935933 939225 - Gm13191 lincRNA lincRNA MGP_LPJ_T0052973.1 MGP_LPJ_G0025373.1 mouse_genomes_project 2 23196649 23202544 + MGP_LPJ_P0052973 Sapcd2 protein_coding protein_coding MGP_LPJ_T0052974.1 MGP_LPJ_G0025373.1 mouse_genomes_project 2 23196658 23201134 + MGP_LPJ_P0052974 Sapcd2 protein_coding protein_coding MGP_LPJ_T0052975.1 MGP_LPJ_G0025373.1 mouse_genomes_project 2 23196662 23201134 + MGP_LPJ_P0052975 Sapcd2 protein_coding protein_coding MGP_LPJ_T0052976.1 MGP_LPJ_G0025373.1 mouse_genomes_project 2 23196688 23199473 + Sapcd2 protein_coding processed_transcript MGP_LPJ_T0052977.1 MGP_LPJ_G0025373.1 mouse_genomes_project 2 23199351 23200603 + Sapcd2 protein_coding processed_transcript MGP_LPJ_T0052978.1 MGP_LPJ_G0025373.1 mouse_genomes_project 2 23200104 23201108 + Sapcd2 protein_coding processed_transcript MGP_LPJ_T0052979.1 MGP_LPJ_G0025373.1 mouse_genomes_project 2 23200290 23201131 + Sapcd2 protein_coding processed_transcript MGP_LPJ_T0099345.1 MGP_LPJ_G0037608.1 mouse_genomes_project 2 116056991 116057157 + Gm26505 snRNA snRNA MGP_LPJ_T0054364.1 MGP_LPJ_G0025624.1 mouse_genomes_project 2 35954166 36008986 - MGP_LPJ_P0054364 Rc3h2 protein_coding nonsense_mediated_decay MGP_LPJ_T0054365.1 MGP_LPJ_G0025624.1 mouse_genomes_project 2 35956261 36008900 - MGP_LPJ_P0054365 Rc3h2 protein_coding protein_coding MGP_LPJ_T0054366.1 MGP_LPJ_G0025624.1 mouse_genomes_project 2 35957885 35958597 - Rc3h2 protein_coding retained_intron MGP_LPJ_T0054367.1 MGP_LPJ_G0025624.1 mouse_genomes_project 2 35958780 35962235 - Rc3h2 protein_coding retained_intron MGP_LPJ_T0054368.1 MGP_LPJ_G0025624.1 mouse_genomes_project 2 35972775 35975011 - Rc3h2 protein_coding retained_intron MGP_LPJ_T0054369.1 MGP_LPJ_G0025624.1 mouse_genomes_project 2 35980439 35983459 - Rc3h2 protein_coding retained_intron MGP_LPJ_T0054370.1 MGP_LPJ_G0025624.1 mouse_genomes_project 2 35993380 35999323 - Rc3h2 protein_coding processed_transcript MGP_LPJ_T0054371.1 MGP_LPJ_G0025624.1 mouse_genomes_project 2 35998119 36001598 - Rc3h2 protein_coding retained_intron MGP_LPJ_T0013523.1 MGP_LPJ_G0011614.1 mouse_genomes_project 2 58382437 58384396 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007402.1 MGP_LPJ_G0006072.1 mouse_genomes_project 2 171622430 171634343 - Gm11464 lincRNA lincRNA MGP_LPJ_T0054306.1 MGP_LPJ_G0025589.1 mouse_genomes_project 2 34637263 34650342 - MGP_LPJ_P0054306 Ndufa8 protein_coding protein_coding MGP_LPJ_T0010461.1 MGP_LPJ_G0008579.1 mouse_genomes_project 2 105975980 105976076 + Gm22757 miRNA miRNA MGP_LPJ_T0055595.1 MGP_LPJ_G0025880.1 mouse_genomes_project 2 86654502 86655944 + MGP_LPJ_P0055595 Olfr1023 protein_coding protein_coding MGP_LPJ_T0013821.1 MGP_LPJ_G0011912.1 mouse_genomes_project 2 172181017 172181513 - processed_pseudogene processed_pseudogene MGP_LPJ_T0054358.1 MGP_LPJ_G0025621.1 mouse_genomes_project 2 35797942 35798872 + MGP_LPJ_P0054358 Olfr366 protein_coding protein_coding MGP_LPJ_T0007303.1 MGP_LPJ_G0005991.1 mouse_genomes_project 2 111503004 111505751 + Gm13923 lincRNA lincRNA MGP_LPJ_T0055617.1 MGP_LPJ_G0025901.1 mouse_genomes_project 2 87046886 87048194 - MGP_LPJ_P0055617 Olfr1051 protein_coding protein_coding MGP_LPJ_T0017817.1 MGP_LPJ_G0015385.1 mouse_genomes_project 2 132923818 132934438 + Gm14023 processed_transcript processed_transcript MGP_LPJ_T0017702.1 MGP_LPJ_G0015324.1 mouse_genomes_project 2 27311573 27319455 - 6530402F18Rik processed_transcript processed_transcript MGP_LPJ_T0017703.1 MGP_LPJ_G0015324.1 mouse_genomes_project 2 27317371 27319468 - 6530402F18Rik processed_transcript processed_transcript MGP_LPJ_T0052299.1 MGP_LPJ_G0025258.1 mouse_genomes_project 2 3036450 3148464 + MGP_LPJ_P0052299 Upf2 protein_coding protein_coding MGP_LPJ_T0052300.1 MGP_LPJ_G0025258.1 mouse_genomes_project 2 3109732 3148459 + MGP_LPJ_P0052300 Upf2 protein_coding protein_coding MGP_LPJ_T0052301.1 MGP_LPJ_G0025258.1 mouse_genomes_project 2 3140837 3147263 + Upf2 protein_coding processed_transcript MGP_LPJ_T0054087.1 MGP_LPJ_G0025558.1 mouse_genomes_project 2 31307168 31347535 - MGP_LPJ_P0054087 Lrsam1 protein_coding protein_coding MGP_LPJ_T0054088.1 MGP_LPJ_G0025558.1 mouse_genomes_project 2 31307172 31347894 - MGP_LPJ_P0054088 Lrsam1 protein_coding protein_coding MGP_LPJ_T0054089.1 MGP_LPJ_G0025558.1 mouse_genomes_project 2 31315729 31328026 - MGP_LPJ_P0054089 Lrsam1 protein_coding nonsense_mediated_decay MGP_LPJ_T0054090.1 MGP_LPJ_G0025558.1 mouse_genomes_project 2 31321983 31324996 - Lrsam1 protein_coding retained_intron MGP_LPJ_T0054091.1 MGP_LPJ_G0025558.1 mouse_genomes_project 2 31340500 31347879 - MGP_LPJ_P0054091 Lrsam1 protein_coding protein_coding MGP_LPJ_T0054092.1 MGP_LPJ_G0025558.1 mouse_genomes_project 2 31340502 31347872 - MGP_LPJ_P0054092 Lrsam1 protein_coding protein_coding MGP_LPJ_T0054093.1 MGP_LPJ_G0025558.1 mouse_genomes_project 2 31340515 31346186 - MGP_LPJ_P0054093 Lrsam1 protein_coding protein_coding MGP_LPJ_T0054094.1 MGP_LPJ_G0025558.1 mouse_genomes_project 2 31340519 31347531 - MGP_LPJ_P0054094 Lrsam1 protein_coding nonsense_mediated_decay MGP_LPJ_T0054095.1 MGP_LPJ_G0025558.1 mouse_genomes_project 2 31343528 31347873 - MGP_LPJ_P0054095 Lrsam1 protein_coding protein_coding MGP_LPJ_T0054096.1 MGP_LPJ_G0025558.1 mouse_genomes_project 2 31343535 31347873 - MGP_LPJ_P0054096 Lrsam1 protein_coding protein_coding MGP_LPJ_T0054097.1 MGP_LPJ_G0025558.1 mouse_genomes_project 2 31346526 31347880 - Lrsam1 protein_coding processed_transcript MGP_LPJ_T0054098.1 MGP_LPJ_G0025558.1 mouse_genomes_project 2 31347353 31347886 - Lrsam1 protein_coding processed_transcript MGP_LPJ_T0052934.1 MGP_LPJ_G0025367.1 mouse_genomes_project 2 23100554 23101597 + MGP_LPJ_P0052934 Tmem210 protein_coding protein_coding MGP_LPJ_T0052935.1 MGP_LPJ_G0025367.1 mouse_genomes_project 2 23100610 23101599 + Tmem210 protein_coding processed_transcript MGP_LPJ_T0056577.1 MGP_LPJ_G0026234.1 mouse_genomes_project 2 116557096 116605434 - MGP_LPJ_P0056577 Scg5 protein_coding protein_coding MGP_LPJ_T0056578.1 MGP_LPJ_G0026234.1 mouse_genomes_project 2 116603652 116605075 - Scg5 protein_coding processed_transcript MGP_LPJ_T0007203.1 MGP_LPJ_G0005908.1 mouse_genomes_project 2 44608769 44610612 + 1700019E08Rik lincRNA lincRNA MGP_LPJ_T0007204.1 MGP_LPJ_G0005908.1 mouse_genomes_project 2 44608964 44610232 + 1700019E08Rik lincRNA lincRNA MGP_LPJ_T0010347.1 MGP_LPJ_G0008465.1 mouse_genomes_project 2 26608 26715 + Gm27306 miRNA miRNA MGP_LPJ_T0057413.1 MGP_LPJ_G0026410.1 mouse_genomes_project 2 132035044 132036298 + MGP_LPJ_P0057413 protein_coding protein_coding MGP_LPJ_T0013379.1 MGP_LPJ_G0011470.1 mouse_genomes_project 2 2373943 2374168 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013839.1 MGP_LPJ_G0011930.1 mouse_genomes_project 2 185807675 185808426 + processed_pseudogene processed_pseudogene MGP_LPJ_T0055428.1 MGP_LPJ_G0025823.1 mouse_genomes_project 2 84135416 84155275 + MGP_LPJ_P0055428 Zc3h15 protein_coding protein_coding MGP_LPJ_T0055429.1 MGP_LPJ_G0025823.1 mouse_genomes_project 2 84135462 84149248 + Zc3h15 protein_coding processed_transcript MGP_LPJ_T0055430.1 MGP_LPJ_G0025823.1 mouse_genomes_project 2 84135518 84144537 + Zc3h15 protein_coding processed_transcript MGP_LPJ_T0055431.1 MGP_LPJ_G0025823.1 mouse_genomes_project 2 84135604 84151111 + Zc3h15 protein_coding processed_transcript MGP_LPJ_T0055432.1 MGP_LPJ_G0025823.1 mouse_genomes_project 2 84147563 84149011 + Zc3h15 protein_coding processed_transcript MGP_LPJ_T0055433.1 MGP_LPJ_G0025823.1 mouse_genomes_project 2 84148056 84152462 + Zc3h15 protein_coding processed_transcript MGP_LPJ_T0055434.1 MGP_LPJ_G0025823.1 mouse_genomes_project 2 84150937 84155275 + Zc3h15 protein_coding processed_transcript MGP_LPJ_T0054348.1 MGP_LPJ_G0025612.1 mouse_genomes_project 2 35516129 35517062 - MGP_LPJ_P0054348 Olfr355 protein_coding protein_coding MGP_LPJ_T0059666.1 MGP_LPJ_G0026949.1 mouse_genomes_project 2 187844570 187891240 - MGP_LPJ_P0059666 Gmeb2 protein_coding protein_coding MGP_LPJ_T0059667.1 MGP_LPJ_G0026949.1 mouse_genomes_project 2 187846906 187873056 - MGP_LPJ_P0059667 Gmeb2 protein_coding nonsense_mediated_decay MGP_LPJ_T0059668.1 MGP_LPJ_G0026949.1 mouse_genomes_project 2 187847896 187849253 - Gmeb2 protein_coding retained_intron MGP_LPJ_T0059669.1 MGP_LPJ_G0026949.1 mouse_genomes_project 2 187849039 187883163 - MGP_LPJ_P0059669 Gmeb2 protein_coding protein_coding MGP_LPJ_T0059670.1 MGP_LPJ_G0026949.1 mouse_genomes_project 2 187849059 187891221 - MGP_LPJ_P0059670 Gmeb2 protein_coding nonsense_mediated_decay MGP_LPJ_T0059671.1 MGP_LPJ_G0026949.1 mouse_genomes_project 2 187858740 187891236 - Gmeb2 protein_coding retained_intron MGP_LPJ_T0017723.1 MGP_LPJ_G0015336.1 mouse_genomes_project 2 56497634 56552111 - BB557941 processed_transcript processed_transcript MGP_LPJ_T0055970.1 MGP_LPJ_G0026087.1 mouse_genomes_project 2 92794098 92805688 + MGP_LPJ_P0055970 Arfgap2 protein_coding protein_coding MGP_LPJ_T0055971.1 MGP_LPJ_G0026087.1 mouse_genomes_project 2 92794417 92805688 + MGP_LPJ_P0055971 Arfgap2 protein_coding protein_coding MGP_LPJ_T0055972.1 MGP_LPJ_G0026087.1 mouse_genomes_project 2 92794448 92795671 + Arfgap2 protein_coding retained_intron MGP_LPJ_T0055973.1 MGP_LPJ_G0026087.1 mouse_genomes_project 2 92794458 92797869 + Arfgap2 protein_coding retained_intron MGP_LPJ_T0055974.1 MGP_LPJ_G0026087.1 mouse_genomes_project 2 92794826 92796513 + Arfgap2 protein_coding processed_transcript MGP_LPJ_T0055975.1 MGP_LPJ_G0026087.1 mouse_genomes_project 2 92798458 92802759 + Arfgap2 protein_coding retained_intron MGP_LPJ_T0055976.1 MGP_LPJ_G0026087.1 mouse_genomes_project 2 92799208 92803277 + Arfgap2 protein_coding retained_intron MGP_LPJ_T0057147.1 MGP_LPJ_G0026346.1 mouse_genomes_project 2 125479512 125512540 + MGP_LPJ_P0057147 Sord protein_coding protein_coding MGP_LPJ_T0055111.1 MGP_LPJ_G0025756.1 mouse_genomes_project 2 71505769 71511637 + MGP_LPJ_P0055111 Dlx1 protein_coding protein_coding MGP_LPJ_T0055112.1 MGP_LPJ_G0025756.1 mouse_genomes_project 2 71506339 71507722 + MGP_LPJ_P0055112 Dlx1 protein_coding protein_coding MGP_LPJ_T0055113.1 MGP_LPJ_G0025756.1 mouse_genomes_project 2 71506757 71507888 + MGP_LPJ_P0055113 Dlx1 protein_coding protein_coding MGP_LPJ_T0055114.1 MGP_LPJ_G0025756.1 mouse_genomes_project 2 71507509 71510176 + MGP_LPJ_P0055114 Dlx1 protein_coding nonsense_mediated_decay MGP_LPJ_T0055115.1 MGP_LPJ_G0025756.1 mouse_genomes_project 2 71507603 71511638 + Dlx1 protein_coding retained_intron MGP_LPJ_T0055116.1 MGP_LPJ_G0025756.1 mouse_genomes_project 2 71508436 71510346 + Dlx1 protein_coding retained_intron MGP_LPJ_T0102006.1 MGP_LPJ_G0040043.1 mouse_genomes_project 2 20242476 20243145 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0099362.1 MGP_LPJ_G0037625.1 mouse_genomes_project 2 152315033 152315140 - Gm25516 snRNA snRNA MGP_LPJ_T0011518.1 MGP_LPJ_G0009636.1 mouse_genomes_project 2 74001826 74001993 - Gm27421 misc_RNA misc_RNA MGP_LPJ_T0007349.1 MGP_LPJ_G0006027.1 mouse_genomes_project 2 139556957 139560553 + Platr3 lincRNA lincRNA MGP_LPJ_T0056756.1 MGP_LPJ_G0026276.1 mouse_genomes_project 2 122347441 122354299 + Vps18 protein_coding retained_intron MGP_LPJ_T0056757.1 MGP_LPJ_G0026276.1 mouse_genomes_project 2 122347443 122359106 + MGP_LPJ_P0056757 Vps18 protein_coding protein_coding MGP_LPJ_T0056758.1 MGP_LPJ_G0026276.1 mouse_genomes_project 2 122347488 122358979 + Vps18 protein_coding processed_transcript MGP_LPJ_T0004197.1 MGP_LPJ_G0003710.1 mouse_genomes_project 2 179295129 179298747 + Ctcflos antisense antisense MGP_LPJ_T0004198.1 MGP_LPJ_G0003710.1 mouse_genomes_project 2 179295146 179321121 + Ctcflos antisense antisense MGP_LPJ_T0004199.1 MGP_LPJ_G0003710.1 mouse_genomes_project 2 179305098 179318131 + Ctcflos antisense antisense MGP_LPJ_T0004200.1 MGP_LPJ_G0003710.1 mouse_genomes_project 2 179313583 179322056 + Ctcflos antisense antisense MGP_LPJ_T0055764.1 MGP_LPJ_G0026031.1 mouse_genomes_project 2 90595476 90596418 - MGP_LPJ_P0055764 Olfr1231 protein_coding protein_coding MGP_LPJ_T0055748.1 MGP_LPJ_G0026017.1 mouse_genomes_project 2 90297653 90298589 - MGP_LPJ_P0055748 Olfr1214 protein_coding protein_coding MGP_LPJ_T0004134.1 MGP_LPJ_G0003657.1 mouse_genomes_project 2 149866164 149871454 - Gm14092 antisense antisense MGP_LPJ_T0055561.1 MGP_LPJ_G0025855.1 mouse_genomes_project 2 85934342 85935272 - MGP_LPJ_P0055561 Olfr992 protein_coding protein_coding MGP_LPJ_T0003917.1 MGP_LPJ_G0003504.1 mouse_genomes_project 2 15075222 15076161 + Gm13324 antisense antisense MGP_LPJ_T0010356.1 MGP_LPJ_G0008474.1 mouse_genomes_project 2 7726327 7726424 + Mir669b miRNA miRNA MGP_LPJ_T0013426.1 MGP_LPJ_G0011517.1 mouse_genomes_project 2 20885454 20887096 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004012.1 MGP_LPJ_G0003578.1 mouse_genomes_project 2 71494143 71505602 - Dlx1as antisense antisense MGP_LPJ_T0004013.1 MGP_LPJ_G0003578.1 mouse_genomes_project 2 71501722 71505610 - Dlx1as antisense antisense MGP_LPJ_T0004014.1 MGP_LPJ_G0003578.1 mouse_genomes_project 2 71505521 71515296 - Dlx1as antisense antisense MGP_LPJ_T0004015.1 MGP_LPJ_G0003578.1 mouse_genomes_project 2 71510440 71515377 - Dlx1as antisense antisense MGP_LPJ_T0058992.1 MGP_LPJ_G0026791.1 mouse_genomes_project 2 170027175 170033070 + Pigt protein_coding retained_intron MGP_LPJ_T0058993.1 MGP_LPJ_G0026791.1 mouse_genomes_project 2 170027188 170037770 + MGP_LPJ_P0058993 Pigt protein_coding protein_coding MGP_LPJ_T0058994.1 MGP_LPJ_G0026791.1 mouse_genomes_project 2 170027190 170037763 + MGP_LPJ_P0058994 Pigt protein_coding nonsense_mediated_decay MGP_LPJ_T0058995.1 MGP_LPJ_G0026791.1 mouse_genomes_project 2 170029545 170031281 + Pigt protein_coding retained_intron MGP_LPJ_T0058120.1 MGP_LPJ_G0026583.1 mouse_genomes_project 2 156584185 156621165 + MGP_LPJ_P0058120 Angpt4 protein_coding protein_coding MGP_LPJ_T0053587.1 MGP_LPJ_G0025483.1 mouse_genomes_project 2 28199257 28202699 + MGP_LPJ_P0053587 Pkn3 protein_coding protein_coding MGP_LPJ_T0053588.1 MGP_LPJ_G0025483.1 mouse_genomes_project 2 28199316 28212479 + Pkn3 protein_coding retained_intron MGP_LPJ_T0053589.1 MGP_LPJ_G0025483.1 mouse_genomes_project 2 28199786 28201556 + MGP_LPJ_P0053589 Pkn3 protein_coding protein_coding MGP_LPJ_T0053590.1 MGP_LPJ_G0025483.1 mouse_genomes_project 2 28200157 28212485 + MGP_LPJ_P0053590 Pkn3 protein_coding protein_coding MGP_LPJ_T0053591.1 MGP_LPJ_G0025483.1 mouse_genomes_project 2 28200271 28207133 + Pkn3 protein_coding retained_intron MGP_LPJ_T0053592.1 MGP_LPJ_G0025483.1 mouse_genomes_project 2 28200327 28212488 + Pkn3 protein_coding retained_intron MGP_LPJ_T0053593.1 MGP_LPJ_G0025483.1 mouse_genomes_project 2 28202424 28204795 + Pkn3 protein_coding retained_intron MGP_LPJ_T0053594.1 MGP_LPJ_G0025483.1 mouse_genomes_project 2 28206231 28208622 + Pkn3 protein_coding retained_intron MGP_LPJ_T0013666.1 MGP_LPJ_G0011757.1 mouse_genomes_project 2 107287318 107287740 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010468.1 MGP_LPJ_G0008586.1 mouse_genomes_project 2 120138160 120138260 + Mir674 miRNA miRNA MGP_LPJ_T0011522.1 MGP_LPJ_G0009640.1 mouse_genomes_project 2 107383822 107383944 - Gm27636 misc_RNA misc_RNA MGP_LPJ_T0001061.1 MGP_LPJ_G0000986.1 mouse_genomes_project 2 8694635 8695756 - TEC TEC MGP_LPJ_T0013840.1 MGP_LPJ_G0011931.1 mouse_genomes_project 2 186476267 186476676 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001086.1 MGP_LPJ_G0001011.1 mouse_genomes_project 2 12981027 12984154 + TEC TEC MGP_LPJ_T0102007.1 MGP_LPJ_G0040044.1 mouse_genomes_project 2 20243286 20243777 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0056015.1 MGP_LPJ_G0026094.1 mouse_genomes_project 2 93241853 93264619 - MGP_LPJ_P0056015 Atg13 protein_coding unknown_likely_coding MGP_LPJ_T0056016.1 MGP_LPJ_G0026094.1 mouse_genomes_project 2 93241856 93280296 - MGP_LPJ_P0056016 Atg13 protein_coding protein_coding MGP_LPJ_T0056017.1 MGP_LPJ_G0026094.1 mouse_genomes_project 2 93241857 93280239 - MGP_LPJ_P0056017 Atg13 protein_coding protein_coding MGP_LPJ_T0056018.1 MGP_LPJ_G0026094.1 mouse_genomes_project 2 93243521 93246953 - Atg13 protein_coding processed_transcript MGP_LPJ_T0056019.1 MGP_LPJ_G0026094.1 mouse_genomes_project 2 93243556 93249440 - Atg13 protein_coding processed_transcript MGP_LPJ_T0056020.1 MGP_LPJ_G0026094.1 mouse_genomes_project 2 93246643 93252463 - Atg13 protein_coding processed_transcript MGP_LPJ_T0056021.1 MGP_LPJ_G0026094.1 mouse_genomes_project 2 93255882 93274887 - Atg13 protein_coding processed_transcript MGP_LPJ_T0102033.1 MGP_LPJ_G0040070.1 mouse_genomes_project 2 87003774 87004718 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013434.1 MGP_LPJ_G0011525.1 mouse_genomes_project 2 23390843 23391084 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004133.1 MGP_LPJ_G0003656.1 mouse_genomes_project 2 148570779 148571962 + 1700108N11Rik antisense antisense MGP_LPJ_T0001109.1 MGP_LPJ_G0001034.1 mouse_genomes_project 2 38406549 38412360 + TEC TEC MGP_LPJ_T0058171.1 MGP_LPJ_G0026605.1 mouse_genomes_project 2 157289839 157293967 - MGP_LPJ_P0058171 Defb19 protein_coding protein_coding MGP_LPJ_T0004109.1 MGP_LPJ_G0003642.1 mouse_genomes_project 2 136025561 136033973 + AV099323 antisense antisense MGP_LPJ_T0057439.1 MGP_LPJ_G0026417.1 mouse_genomes_project 2 132555761 132556894 - MGP_LPJ_P0057439 Gm10762 protein_coding protein_coding MGP_LPJ_T0054653.1 MGP_LPJ_G0025671.1 mouse_genomes_project 2 53339289 53340749 - MGP_LPJ_P0054653 Rprm protein_coding protein_coding MGP_LPJ_T0053373.1 MGP_LPJ_G0025447.1 mouse_genomes_project 2 25631535 25697307 + MGP_LPJ_P0053373 Rxra protein_coding protein_coding MGP_LPJ_T0053374.1 MGP_LPJ_G0025447.1 mouse_genomes_project 2 25664721 25715594 + MGP_LPJ_P0053374 Rxra protein_coding protein_coding MGP_LPJ_T0053375.1 MGP_LPJ_G0025447.1 mouse_genomes_project 2 25666012 25715594 + MGP_LPJ_P0053375 Rxra protein_coding protein_coding MGP_LPJ_T0053376.1 MGP_LPJ_G0025447.1 mouse_genomes_project 2 25692707 25718370 + MGP_LPJ_P0053376 Rxra protein_coding protein_coding MGP_LPJ_T0053377.1 MGP_LPJ_G0025447.1 mouse_genomes_project 2 25692707 25716828 + MGP_LPJ_P0053377 Rxra protein_coding protein_coding MGP_LPJ_T0053378.1 MGP_LPJ_G0025447.1 mouse_genomes_project 2 25695609 25704082 + Rxra protein_coding processed_transcript MGP_LPJ_T0058834.1 MGP_LPJ_G0026743.1 mouse_genomes_project 2 166188947 166215065 + MGP_LPJ_P0058834 Lpin3 protein_coding protein_coding MGP_LPJ_T0058835.1 MGP_LPJ_G0026743.1 mouse_genomes_project 2 166196404 166215070 + MGP_LPJ_P0058835 Lpin3 protein_coding protein_coding MGP_LPJ_T0058836.1 MGP_LPJ_G0026743.1 mouse_genomes_project 2 166196404 166215070 + MGP_LPJ_P0058836 Lpin3 protein_coding protein_coding MGP_LPJ_T0058837.1 MGP_LPJ_G0026743.1 mouse_genomes_project 2 166196467 166214860 + MGP_LPJ_P0058837 Lpin3 protein_coding protein_coding MGP_LPJ_T0058838.1 MGP_LPJ_G0026743.1 mouse_genomes_project 2 166210616 166212805 + Lpin3 protein_coding processed_transcript MGP_LPJ_T0056451.1 MGP_LPJ_G0026176.1 mouse_genomes_project 2 109715364 109723295 + MGP_LPJ_P0056451 Kcna4 protein_coding protein_coding MGP_LPJ_T0056452.1 MGP_LPJ_G0026176.1 mouse_genomes_project 2 109716120 109719265 + Kcna4 protein_coding processed_transcript MGP_LPJ_T0004084.1 MGP_LPJ_G0003622.1 mouse_genomes_project 2 121863458 121867612 - Gm14091 antisense antisense MGP_LPJ_T0056508.1 MGP_LPJ_G0026195.1 mouse_genomes_project 2 113877074 113879525 + MGP_LPJ_P0056508 protein_coding protein_coding MGP_LPJ_T0013504.1 MGP_LPJ_G0011595.1 mouse_genomes_project 2 51780228 51780511 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017814.1 MGP_LPJ_G0015383.1 mouse_genomes_project 2 132670696 132675428 - Gm14022 processed_transcript processed_transcript MGP_LPJ_T0059795.1 MGP_LPJ_G0026967.1 mouse_genomes_project 2 188337051 188338713 - MGP_LPJ_P0059795 Lkaaear1 protein_coding protein_coding MGP_LPJ_T0059796.1 MGP_LPJ_G0026967.1 mouse_genomes_project 2 188337054 188337675 - MGP_LPJ_P0059796 Lkaaear1 protein_coding protein_coding MGP_LPJ_T0013479.1 MGP_LPJ_G0011570.1 mouse_genomes_project 2 39729888 39730241 + processed_pseudogene processed_pseudogene MGP_LPJ_T0057512.1 MGP_LPJ_G0026437.1 mouse_genomes_project 2 134007972 134081186 + MGP_LPJ_P0057512 Ebf4 protein_coding protein_coding MGP_LPJ_T0057513.1 MGP_LPJ_G0026437.1 mouse_genomes_project 2 134008823 134081186 + Ebf4 protein_coding retained_intron MGP_LPJ_T0057514.1 MGP_LPJ_G0026437.1 mouse_genomes_project 2 134008823 134081186 + MGP_LPJ_P0057514 Ebf4 protein_coding nonsense_mediated_decay MGP_LPJ_T0057515.1 MGP_LPJ_G0026437.1 mouse_genomes_project 2 134008823 134081186 + MGP_LPJ_P0057515 Ebf4 protein_coding protein_coding MGP_LPJ_T0057516.1 MGP_LPJ_G0026437.1 mouse_genomes_project 2 134008823 134081186 + MGP_LPJ_P0057516 Ebf4 protein_coding protein_coding MGP_LPJ_T0057517.1 MGP_LPJ_G0026437.1 mouse_genomes_project 2 134008823 134081186 + MGP_LPJ_P0057517 Ebf4 protein_coding nonsense_mediated_decay MGP_LPJ_T0013812.1 MGP_LPJ_G0011903.1 mouse_genomes_project 2 166623618 166624068 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017694.1 MGP_LPJ_G0015319.1 mouse_genomes_project 2 24343667 24357385 + 0610009E02Rik processed_transcript processed_transcript MGP_LPJ_T0017695.1 MGP_LPJ_G0015319.1 mouse_genomes_project 2 24343895 24356001 + 0610009E02Rik processed_transcript processed_transcript MGP_LPJ_T0017696.1 MGP_LPJ_G0015319.1 mouse_genomes_project 2 24343913 24357396 + 0610009E02Rik processed_transcript processed_transcript MGP_LPJ_T0055741.1 MGP_LPJ_G0026012.1 mouse_genomes_project 2 90209522 90210455 - MGP_LPJ_P0055741 Olfr1209 protein_coding protein_coding MGP_LPJ_T0055945.1 MGP_LPJ_G0026084.1 mouse_genomes_project 2 92725167 92730589 + MGP_LPJ_P0055945 Acp2 protein_coding protein_coding MGP_LPJ_T0055946.1 MGP_LPJ_G0026084.1 mouse_genomes_project 2 92725191 92738856 + MGP_LPJ_P0055946 Acp2 protein_coding protein_coding MGP_LPJ_T0055947.1 MGP_LPJ_G0026084.1 mouse_genomes_project 2 92725206 92736900 + Acp2 protein_coding retained_intron MGP_LPJ_T0055948.1 MGP_LPJ_G0026084.1 mouse_genomes_project 2 92725206 92728322 + MGP_LPJ_P0055948 Acp2 protein_coding protein_coding MGP_LPJ_T0055949.1 MGP_LPJ_G0026084.1 mouse_genomes_project 2 92725210 92725932 + Acp2 protein_coding processed_transcript MGP_LPJ_T0058019.1 MGP_LPJ_G0026559.1 mouse_genomes_project 2 153919632 153925087 + MGP_LPJ_P0058019 Cst10 protein_coding protein_coding MGP_LPJ_T0058020.1 MGP_LPJ_G0026559.1 mouse_genomes_project 2 153919824 153925087 + MGP_LPJ_P0058020 Cst10 protein_coding protein_coding MGP_LPJ_T0058021.1 MGP_LPJ_G0026559.1 mouse_genomes_project 2 153919908 153925087 + MGP_LPJ_P0058021 Cst10 protein_coding protein_coding MGP_LPJ_T0056848.1 MGP_LPJ_G0026296.1 mouse_genomes_project 2 123201476 123268150 - MGP_LPJ_P0056848 Ehd4 protein_coding protein_coding MGP_LPJ_T0056849.1 MGP_LPJ_G0026296.1 mouse_genomes_project 2 123215613 123243075 - Ehd4 protein_coding processed_transcript MGP_LPJ_T0056850.1 MGP_LPJ_G0026296.1 mouse_genomes_project 2 123215798 123250944 - Ehd4 protein_coding processed_transcript MGP_LPJ_T0056851.1 MGP_LPJ_G0026296.1 mouse_genomes_project 2 123235759 123268006 - Ehd4 protein_coding processed_transcript MGP_LPJ_T0052159.1 MGP_LPJ_G0025232.1 mouse_genomes_project 2 67881 198945 + MGP_LPJ_P0052159 Fam171a1 protein_coding protein_coding MGP_LPJ_T0052160.1 MGP_LPJ_G0025232.1 mouse_genomes_project 2 68024 199502 + MGP_LPJ_P0052160 Fam171a1 protein_coding protein_coding MGP_LPJ_T0052161.1 MGP_LPJ_G0025232.1 mouse_genomes_project 2 68153 199499 + MGP_LPJ_P0052161 Fam171a1 protein_coding protein_coding MGP_LPJ_T0054217.1 MGP_LPJ_G0025576.1 mouse_genomes_project 2 33430077 33452287 - MGP_LPJ_P0054217 Phf19 protein_coding protein_coding MGP_LPJ_T0054218.1 MGP_LPJ_G0025576.1 mouse_genomes_project 2 33430104 33440503 - Phf19 protein_coding processed_transcript MGP_LPJ_T0054219.1 MGP_LPJ_G0025576.1 mouse_genomes_project 2 33434402 33441258 - Phf19 protein_coding processed_transcript MGP_LPJ_T0054220.1 MGP_LPJ_G0025576.1 mouse_genomes_project 2 33435289 33452337 - Phf19 protein_coding retained_intron MGP_LPJ_T0054221.1 MGP_LPJ_G0025576.1 mouse_genomes_project 2 33445312 33452328 - MGP_LPJ_P0054221 Phf19 protein_coding protein_coding MGP_LPJ_T0013431.1 MGP_LPJ_G0011522.1 mouse_genomes_project 2 22352490 22354102 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013776.1 MGP_LPJ_G0011867.1 mouse_genomes_project 2 155528816 155529173 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099341.1 MGP_LPJ_G0037604.1 mouse_genomes_project 2 86652855 86653035 - Gm24037 snRNA snRNA MGP_LPJ_T0058504.1 MGP_LPJ_G0026688.1 mouse_genomes_project 2 160971220 161007047 - MGP_LPJ_P0058504 6430550D23Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0058509.1 MGP_LPJ_G0026688.1 mouse_genomes_project 2 160999572 161003587 - MGP_LPJ_P0058509 6430550D23Rik protein_coding protein_coding MGP_LPJ_T0058510.1 MGP_LPJ_G0026688.1 mouse_genomes_project 2 160999739 161007063 - 6430550D23Rik protein_coding retained_intron MGP_LPJ_T0058511.1 MGP_LPJ_G0026688.1 mouse_genomes_project 2 161001618 161007081 - MGP_LPJ_P0058511 6430550D23Rik protein_coding protein_coding MGP_LPJ_T0058512.1 MGP_LPJ_G0026688.1 mouse_genomes_project 2 161002302 161007059 - MGP_LPJ_P0058512 6430550D23Rik protein_coding protein_coding MGP_LPJ_T0058513.1 MGP_LPJ_G0026688.1 mouse_genomes_project 2 161002395 161007117 - MGP_LPJ_P0058513 6430550D23Rik protein_coding protein_coding MGP_LPJ_T0058514.1 MGP_LPJ_G0026688.1 mouse_genomes_project 2 161002482 161003587 - MGP_LPJ_P0058514 6430550D23Rik protein_coding protein_coding MGP_LPJ_T0058515.1 MGP_LPJ_G0026688.1 mouse_genomes_project 2 161002525 161003296 - MGP_LPJ_P0058515 6430550D23Rik protein_coding protein_coding MGP_LPJ_T0058516.1 MGP_LPJ_G0026688.1 mouse_genomes_project 2 161002557 161003296 - MGP_LPJ_P0058516 6430550D23Rik protein_coding protein_coding MGP_LPJ_T0057159.1 MGP_LPJ_G0026351.1 mouse_genomes_project 2 125596242 125614202 - MGP_LPJ_P0057159 protein_coding protein_coding MGP_LPJ_T0057160.1 MGP_LPJ_G0026351.1 mouse_genomes_project 2 125596243 125616292 - MGP_LPJ_P0057160 protein_coding protein_coding MGP_LPJ_T0057161.1 MGP_LPJ_G0026351.1 mouse_genomes_project 2 125596478 125616206 - MGP_LPJ_P0057161 protein_coding protein_coding MGP_LPJ_T0057162.1 MGP_LPJ_G0026351.1 mouse_genomes_project 2 125596478 125606922 - MGP_LPJ_P0057162 protein_coding protein_coding MGP_LPJ_T0057163.1 MGP_LPJ_G0026351.1 mouse_genomes_project 2 125596478 125616536 - MGP_LPJ_P0057163 protein_coding protein_coding MGP_LPJ_T0057164.1 MGP_LPJ_G0026351.1 mouse_genomes_project 2 125596549 125605582 - MGP_LPJ_P0057164 protein_coding protein_coding MGP_LPJ_T0057165.1 MGP_LPJ_G0026351.1 mouse_genomes_project 2 125596549 125605608 - MGP_LPJ_P0057165 protein_coding protein_coding MGP_LPJ_T0057166.1 MGP_LPJ_G0026351.1 mouse_genomes_project 2 125596703 125616506 - MGP_LPJ_P0057166 protein_coding protein_coding MGP_LPJ_T0057167.1 MGP_LPJ_G0026351.1 mouse_genomes_project 2 125596738 125604562 - MGP_LPJ_P0057167 protein_coding protein_coding MGP_LPJ_T0057168.1 MGP_LPJ_G0026351.1 mouse_genomes_project 2 125596854 125601455 - protein_coding retained_intron MGP_LPJ_T0058747.1 MGP_LPJ_G0026724.1 mouse_genomes_project 2 163256513 163294135 - MGP_LPJ_P0058747 Tgm2 protein_coding protein_coding MGP_LPJ_T0058748.1 MGP_LPJ_G0026724.1 mouse_genomes_project 2 163268557 163294092 - MGP_LPJ_P0058748 Tgm2 protein_coding nonsense_mediated_decay MGP_LPJ_T0058749.1 MGP_LPJ_G0026724.1 mouse_genomes_project 2 163271591 163294065 - Tgm2 protein_coding retained_intron MGP_LPJ_T0058750.1 MGP_LPJ_G0026724.1 mouse_genomes_project 2 163275533 163287531 - Tgm2 protein_coding processed_transcript MGP_LPJ_T0059585.1 MGP_LPJ_G0026933.1 mouse_genomes_project 2 187257097 187266448 + MGP_LPJ_P0059585 Gid8 protein_coding protein_coding MGP_LPJ_T0059586.1 MGP_LPJ_G0026933.1 mouse_genomes_project 2 187258667 187261772 + Gid8 protein_coding processed_transcript MGP_LPJ_T0059587.1 MGP_LPJ_G0026933.1 mouse_genomes_project 2 187259526 187266445 + MGP_LPJ_P0059587 Gid8 protein_coding protein_coding MGP_LPJ_T0010388.1 MGP_LPJ_G0008506.1 mouse_genomes_project 2 7788190 7788292 + Mir297a-3 miRNA miRNA MGP_LPJ_T0004137.1 MGP_LPJ_G0003660.1 mouse_genomes_project 2 151585101 151586930 + antisense antisense MGP_LPJ_T0010425.1 MGP_LPJ_G0008543.1 mouse_genomes_project 2 31070425 31070507 - Mir2861 miRNA miRNA MGP_LPJ_T0007305.1 MGP_LPJ_G0005993.1 mouse_genomes_project 2 117057288 117058550 - Gm29234 lincRNA lincRNA MGP_LPJ_T0010402.1 MGP_LPJ_G0008520.1 mouse_genomes_project 2 22856220 22856287 - Gm24328 miRNA miRNA MGP_LPJ_T0058901.1 MGP_LPJ_G0026758.1 mouse_genomes_project 2 168947070 168953321 - MGP_LPJ_P0058901 Fitm2 protein_coding protein_coding MGP_LPJ_T0100581.1 MGP_LPJ_G0038844.1 mouse_genomes_project 2 41608839 41608971 + Gm24350 snoRNA snoRNA MGP_LPJ_T0007270.1 MGP_LPJ_G0005965.1 mouse_genomes_project 2 92779879 92785130 - Gm17281 lincRNA lincRNA MGP_LPJ_T0055600.1 MGP_LPJ_G0025884.1 mouse_genomes_project 2 86733682 86734657 + MGP_LPJ_P0055600 protein_coding protein_coding MGP_LPJ_T0013844.1 MGP_LPJ_G0011935.1 mouse_genomes_project 2 188553778 188554078 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004140.1 MGP_LPJ_G0003663.1 mouse_genomes_project 2 156344075 156351056 - Tmem74bos antisense antisense MGP_LPJ_T0004141.1 MGP_LPJ_G0003663.1 mouse_genomes_project 2 156345630 156350780 - Tmem74bos antisense antisense MGP_LPJ_T0058705.1 MGP_LPJ_G0026716.1 mouse_genomes_project 2 162457771 162487619 + MGP_LPJ_P0058705 Manbal protein_coding protein_coding MGP_LPJ_T0054106.1 MGP_LPJ_G0025560.1 mouse_genomes_project 2 31361696 31370748 - Slc2a8 protein_coding retained_intron MGP_LPJ_T0054107.1 MGP_LPJ_G0025560.1 mouse_genomes_project 2 31361696 31370762 - MGP_LPJ_P0054107 Slc2a8 protein_coding protein_coding MGP_LPJ_T0054108.1 MGP_LPJ_G0025560.1 mouse_genomes_project 2 31362291 31370697 - MGP_LPJ_P0054108 Slc2a8 protein_coding nonsense_mediated_decay MGP_LPJ_T0054109.1 MGP_LPJ_G0025560.1 mouse_genomes_project 2 31362291 31370697 - MGP_LPJ_P0054109 Slc2a8 protein_coding nonsense_mediated_decay MGP_LPJ_T0054110.1 MGP_LPJ_G0025560.1 mouse_genomes_project 2 31362291 31370697 - MGP_LPJ_P0054110 Slc2a8 protein_coding protein_coding MGP_LPJ_T0054111.1 MGP_LPJ_G0025560.1 mouse_genomes_project 2 31364633 31370751 - MGP_LPJ_P0054111 Slc2a8 protein_coding protein_coding MGP_LPJ_T0054112.1 MGP_LPJ_G0025560.1 mouse_genomes_project 2 31365617 31370699 - Slc2a8 protein_coding retained_intron MGP_LPJ_T0054113.1 MGP_LPJ_G0025560.1 mouse_genomes_project 2 31370165 31370763 - Slc2a8 protein_coding processed_transcript MGP_LPJ_T0099364.1 MGP_LPJ_G0037627.1 mouse_genomes_project 2 157911374 157911477 + Gm25643 snRNA snRNA MGP_LPJ_T0013594.1 MGP_LPJ_G0011685.1 mouse_genomes_project 2 83047268 83047859 - processed_pseudogene processed_pseudogene MGP_LPJ_T0059105.1 MGP_LPJ_G0026822.1 mouse_genomes_project 2 170659900 170670708 - MGP_LPJ_P0059105 1700025C18Rik protein_coding protein_coding MGP_LPJ_T0055603.1 MGP_LPJ_G0025887.1 mouse_genomes_project 2 86779319 86780330 + MGP_LPJ_P0055603 Olfr1031 protein_coding protein_coding MGP_LPJ_T0017873.1 MGP_LPJ_G0015413.1 mouse_genomes_project 2 186456085 186458298 + 4921531C22Rik processed_transcript processed_transcript MGP_LPJ_T0017874.1 MGP_LPJ_G0015413.1 mouse_genomes_project 2 186456734 186457272 + 4921531C22Rik processed_transcript processed_transcript MGP_LPJ_T0055076.1 MGP_LPJ_G0025750.1 mouse_genomes_project 2 70987583 71023235 + MGP_LPJ_P0055076 Dcaf17 protein_coding protein_coding MGP_LPJ_T0055077.1 MGP_LPJ_G0025750.1 mouse_genomes_project 2 70988013 71014781 + MGP_LPJ_P0055077 Dcaf17 protein_coding protein_coding MGP_LPJ_T0055078.1 MGP_LPJ_G0025750.1 mouse_genomes_project 2 70988101 71026895 + MGP_LPJ_P0055078 Dcaf17 protein_coding nonsense_mediated_decay MGP_LPJ_T0055079.1 MGP_LPJ_G0025750.1 mouse_genomes_project 2 70988107 71025261 + MGP_LPJ_P0055079 Dcaf17 protein_coding protein_coding MGP_LPJ_T0055080.1 MGP_LPJ_G0025750.1 mouse_genomes_project 2 70988249 71026546 + MGP_LPJ_P0055080 Dcaf17 protein_coding protein_coding MGP_LPJ_T0055081.1 MGP_LPJ_G0025750.1 mouse_genomes_project 2 71011958 71018670 + Dcaf17 protein_coding processed_transcript MGP_LPJ_T0013405.1 MGP_LPJ_G0011496.1 mouse_genomes_project 2 14668036 14668842 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013408.1 MGP_LPJ_G0011499.1 mouse_genomes_project 2 15736424 15736838 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010389.1 MGP_LPJ_G0008507.1 mouse_genomes_project 2 7788467 7788588 + Mir466l miRNA miRNA MGP_LPJ_T0013670.1 MGP_LPJ_G0011761.1 mouse_genomes_project 2 109337961 109338577 - processed_pseudogene processed_pseudogene MGP_LPJ_T0058641.1 MGP_LPJ_G0026703.1 mouse_genomes_project 2 161642171 161790891 + MGP_LPJ_P0058641 Dlgap4 protein_coding protein_coding MGP_LPJ_T0058642.1 MGP_LPJ_G0026703.1 mouse_genomes_project 2 161642185 161805610 + MGP_LPJ_P0058642 Dlgap4 protein_coding protein_coding MGP_LPJ_T0058643.1 MGP_LPJ_G0026703.1 mouse_genomes_project 2 161642185 161805612 + MGP_LPJ_P0058643 Dlgap4 protein_coding protein_coding MGP_LPJ_T0058644.1 MGP_LPJ_G0026703.1 mouse_genomes_project 2 161738611 161804423 + MGP_LPJ_P0058644 Dlgap4 protein_coding protein_coding MGP_LPJ_T0058645.1 MGP_LPJ_G0026703.1 mouse_genomes_project 2 161738611 161804428 + MGP_LPJ_P0058645 Dlgap4 protein_coding protein_coding MGP_LPJ_T0058646.1 MGP_LPJ_G0026703.1 mouse_genomes_project 2 161760109 161804204 + Dlgap4 protein_coding retained_intron MGP_LPJ_T0058647.1 MGP_LPJ_G0026703.1 mouse_genomes_project 2 161760120 161792113 + MGP_LPJ_P0058647 Dlgap4 protein_coding protein_coding MGP_LPJ_T0058648.1 MGP_LPJ_G0026703.1 mouse_genomes_project 2 161760123 161791950 + MGP_LPJ_P0058648 Dlgap4 protein_coding protein_coding MGP_LPJ_T0058649.1 MGP_LPJ_G0026703.1 mouse_genomes_project 2 161760125 161804093 + MGP_LPJ_P0058649 Dlgap4 protein_coding protein_coding MGP_LPJ_T0058650.1 MGP_LPJ_G0026703.1 mouse_genomes_project 2 161760133 161804152 + MGP_LPJ_P0058650 Dlgap4 protein_coding protein_coding MGP_LPJ_T0058651.1 MGP_LPJ_G0026703.1 mouse_genomes_project 2 161760558 161805612 + MGP_LPJ_P0058651 Dlgap4 protein_coding protein_coding MGP_LPJ_T0058652.1 MGP_LPJ_G0026703.1 mouse_genomes_project 2 161791746 161805619 + MGP_LPJ_P0058652 Dlgap4 protein_coding protein_coding MGP_LPJ_T0058653.1 MGP_LPJ_G0026703.1 mouse_genomes_project 2 161801191 161804028 + Dlgap4 protein_coding processed_transcript MGP_LPJ_T0013760.1 MGP_LPJ_G0011851.1 mouse_genomes_project 2 150249980 150250603 + processed_pseudogene processed_pseudogene MGP_LPJ_T0054307.1 MGP_LPJ_G0025590.1 mouse_genomes_project 2 34650393 34681888 + MGP_LPJ_P0054307 Morn5 protein_coding protein_coding MGP_LPJ_T0055711.1 MGP_LPJ_G0025983.1 mouse_genomes_project 2 89282362 89283409 - MGP_LPJ_P0055711 Olfr1166 protein_coding protein_coding MGP_LPJ_T0004110.1 MGP_LPJ_G0003643.1 mouse_genomes_project 2 136301849 136327034 + 1700026D11Rik antisense antisense MGP_LPJ_T0004111.1 MGP_LPJ_G0003643.1 mouse_genomes_project 2 136301931 136327075 + 1700026D11Rik antisense antisense MGP_LPJ_T0004112.1 MGP_LPJ_G0003643.1 mouse_genomes_project 2 136301931 136328641 + 1700026D11Rik antisense antisense MGP_LPJ_T0004113.1 MGP_LPJ_G0003643.1 mouse_genomes_project 2 136301943 136338791 + 1700026D11Rik antisense antisense MGP_LPJ_T0004114.1 MGP_LPJ_G0003643.1 mouse_genomes_project 2 136301959 136327035 + 1700026D11Rik antisense antisense MGP_LPJ_T0004115.1 MGP_LPJ_G0003643.1 mouse_genomes_project 2 136301959 136338592 + 1700026D11Rik antisense antisense MGP_LPJ_T0054372.1 MGP_LPJ_G0025625.1 mouse_genomes_project 2 36011608 36017028 - MGP_LPJ_P0054372 Zbtb6 protein_coding protein_coding MGP_LPJ_T0054373.1 MGP_LPJ_G0025625.1 mouse_genomes_project 2 36011611 36029288 - MGP_LPJ_P0054373 Zbtb6 protein_coding protein_coding MGP_LPJ_T0057126.1 MGP_LPJ_G0026338.1 mouse_genomes_project 2 125171451 125234947 + MGP_LPJ_P0057126 Ctdspl2 protein_coding protein_coding MGP_LPJ_T0057127.1 MGP_LPJ_G0026338.1 mouse_genomes_project 2 125171865 125233694 + MGP_LPJ_P0057127 Ctdspl2 protein_coding protein_coding MGP_LPJ_T0057128.1 MGP_LPJ_G0026338.1 mouse_genomes_project 2 125171914 125215248 + Ctdspl2 protein_coding retained_intron MGP_LPJ_T0057129.1 MGP_LPJ_G0026338.1 mouse_genomes_project 2 125171934 125233918 + Ctdspl2 protein_coding processed_transcript MGP_LPJ_T0057130.1 MGP_LPJ_G0026338.1 mouse_genomes_project 2 125171940 125214845 + Ctdspl2 protein_coding processed_transcript MGP_LPJ_T0057131.1 MGP_LPJ_G0026338.1 mouse_genomes_project 2 125171940 125206473 + Ctdspl2 protein_coding retained_intron MGP_LPJ_T0057132.1 MGP_LPJ_G0026338.1 mouse_genomes_project 2 125172113 125232033 + MGP_LPJ_P0057132 Ctdspl2 protein_coding protein_coding MGP_LPJ_T0057133.1 MGP_LPJ_G0026338.1 mouse_genomes_project 2 125183910 125234894 + MGP_LPJ_P0057133 Ctdspl2 protein_coding protein_coding MGP_LPJ_T0057134.1 MGP_LPJ_G0026338.1 mouse_genomes_project 2 125194941 125225247 + Ctdspl2 protein_coding retained_intron MGP_LPJ_T0055785.1 MGP_LPJ_G0026045.1 mouse_genomes_project 2 90962398 90963483 - MGP_LPJ_P0055785 protein_coding protein_coding MGP_LPJ_T0055464.1 MGP_LPJ_G0025830.1 mouse_genomes_project 2 85080346 85134924 - MGP_LPJ_P0055464 protein_coding protein_coding MGP_LPJ_T0055465.1 MGP_LPJ_G0025830.1 mouse_genomes_project 2 85080346 85134924 - MGP_LPJ_P0055465 protein_coding protein_coding MGP_LPJ_T0055466.1 MGP_LPJ_G0025830.1 mouse_genomes_project 2 85080346 85134924 - MGP_LPJ_P0055466 protein_coding protein_coding MGP_LPJ_T0055467.1 MGP_LPJ_G0025830.1 mouse_genomes_project 2 85080346 85134924 - MGP_LPJ_P0055467 protein_coding protein_coding MGP_LPJ_T0055468.1 MGP_LPJ_G0025830.1 mouse_genomes_project 2 85080346 85134924 - MGP_LPJ_P0055468 protein_coding protein_coding MGP_LPJ_T0055469.1 MGP_LPJ_G0025830.1 mouse_genomes_project 2 85080348 85134924 - MGP_LPJ_P0055469 protein_coding protein_coding MGP_LPJ_T0055470.1 MGP_LPJ_G0025830.1 mouse_genomes_project 2 85080348 85134924 - MGP_LPJ_P0055470 protein_coding protein_coding MGP_LPJ_T0055471.1 MGP_LPJ_G0025830.1 mouse_genomes_project 2 85080348 85134924 - MGP_LPJ_P0055471 protein_coding protein_coding MGP_LPJ_T0055472.1 MGP_LPJ_G0025830.1 mouse_genomes_project 2 85081056 85134919 - MGP_LPJ_P0055472 protein_coding protein_coding MGP_LPJ_T0055473.1 MGP_LPJ_G0025830.1 mouse_genomes_project 2 85081058 85134721 - protein_coding processed_transcript MGP_LPJ_T0055474.1 MGP_LPJ_G0025830.1 mouse_genomes_project 2 85081058 85134691 - MGP_LPJ_P0055474 protein_coding protein_coding MGP_LPJ_T0055475.1 MGP_LPJ_G0025830.1 mouse_genomes_project 2 85081058 85133676 - MGP_LPJ_P0055475 protein_coding protein_coding MGP_LPJ_T0055476.1 MGP_LPJ_G0025830.1 mouse_genomes_project 2 85081198 85134926 - MGP_LPJ_P0055476 protein_coding protein_coding MGP_LPJ_T0055478.1 MGP_LPJ_G0025830.1 mouse_genomes_project 2 85082803 85089919 - protein_coding processed_transcript MGP_LPJ_T0055479.1 MGP_LPJ_G0025830.1 mouse_genomes_project 2 85082899 85089939 - protein_coding processed_transcript MGP_LPJ_T0055480.1 MGP_LPJ_G0025830.1 mouse_genomes_project 2 85089228 85092840 - protein_coding processed_transcript MGP_LPJ_T0055481.1 MGP_LPJ_G0025830.1 mouse_genomes_project 2 85104643 85122352 - protein_coding processed_transcript MGP_LPJ_T0055482.1 MGP_LPJ_G0025830.1 mouse_genomes_project 2 85104682 85132733 - protein_coding processed_transcript MGP_LPJ_T0013506.1 MGP_LPJ_G0011597.1 mouse_genomes_project 2 52692970 52693949 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004132.1 MGP_LPJ_G0003655.1 mouse_genomes_project 2 148478012 148479637 + 4930444E06Rik antisense antisense MGP_LPJ_T0004085.1 MGP_LPJ_G0003623.1 mouse_genomes_project 2 122035377 122039012 + Gm14089 antisense antisense MGP_LPJ_T0058352.1 MGP_LPJ_G0026655.1 mouse_genomes_project 2 159425585 159427086 + MGP_LPJ_P0058352 Actl10 protein_coding protein_coding MGP_LPJ_T0017681.1 MGP_LPJ_G0015312.1 mouse_genomes_project 2 11944820 11967355 + Gm13266 processed_transcript retained_intron MGP_LPJ_T0017682.1 MGP_LPJ_G0015312.1 mouse_genomes_project 2 11944820 11974379 + Gm13266 processed_transcript lincRNA MGP_LPJ_T0017683.1 MGP_LPJ_G0015312.1 mouse_genomes_project 2 11944828 11967175 + Gm13266 processed_transcript lincRNA MGP_LPJ_T0101652.1 MGP_LPJ_G0039708.1 mouse_genomes_project 2 108353456 108392132 + unitary_pseudogene processed_transcript MGP_LPJ_T0101653.1 MGP_LPJ_G0039708.1 mouse_genomes_project 2 108389600 108773244 + unitary_pseudogene unitary_pseudogene MGP_LPJ_T0101654.1 MGP_LPJ_G0039708.1 mouse_genomes_project 2 108594197 108773244 + unitary_pseudogene processed_transcript MGP_LPJ_T0101655.1 MGP_LPJ_G0039708.1 mouse_genomes_project 2 108598603 108712519 + unitary_pseudogene processed_transcript MGP_LPJ_T0101656.1 MGP_LPJ_G0039708.1 mouse_genomes_project 2 108771307 108794626 + unitary_pseudogene retained_intron MGP_LPJ_T0056144.1 MGP_LPJ_G0026116.1 mouse_genomes_project 2 95348031 95387840 + MGP_LPJ_P0056144 Alx4 protein_coding protein_coding MGP_LPJ_T0056145.1 MGP_LPJ_G0026116.1 mouse_genomes_project 2 95348035 95387840 + MGP_LPJ_P0056145 Alx4 protein_coding protein_coding MGP_LPJ_T0058870.1 MGP_LPJ_G0026750.1 mouse_genomes_project 2 168420018 168444945 + MGP_LPJ_P0058870 Sgk2 protein_coding protein_coding MGP_LPJ_T0058871.1 MGP_LPJ_G0026750.1 mouse_genomes_project 2 168420190 168444944 + MGP_LPJ_P0058871 Sgk2 protein_coding protein_coding MGP_LPJ_T0058872.1 MGP_LPJ_G0026750.1 mouse_genomes_project 2 168430998 168439733 + Sgk2 protein_coding retained_intron MGP_LPJ_T0055589.1 MGP_LPJ_G0025874.1 mouse_genomes_project 2 86546317 86547256 + MGP_LPJ_P0055589 Olfr1015 protein_coding protein_coding MGP_LPJ_T0053416.1 MGP_LPJ_G0025458.1 mouse_genomes_project 2 26583125 26599921 - MGP_LPJ_P0053416 Gtf3c5 protein_coding protein_coding MGP_LPJ_T0053417.1 MGP_LPJ_G0025458.1 mouse_genomes_project 2 26583125 26599831 - MGP_LPJ_P0053417 Gtf3c5 protein_coding protein_coding MGP_LPJ_T0053418.1 MGP_LPJ_G0025458.1 mouse_genomes_project 2 26585570 26588006 - Gtf3c5 protein_coding retained_intron MGP_LPJ_T0053419.1 MGP_LPJ_G0025458.1 mouse_genomes_project 2 26589064 26590740 - Gtf3c5 protein_coding retained_intron MGP_LPJ_T0053420.1 MGP_LPJ_G0025458.1 mouse_genomes_project 2 26595871 26599909 - Gtf3c5 protein_coding retained_intron MGP_LPJ_T0053421.1 MGP_LPJ_G0025458.1 mouse_genomes_project 2 26596404 26599630 - MGP_LPJ_P0053421 Gtf3c5 protein_coding nonsense_mediated_decay MGP_LPJ_T0053422.1 MGP_LPJ_G0025458.1 mouse_genomes_project 2 26599646 26600393 - Gtf3c5 protein_coding processed_transcript MGP_LPJ_T0004126.1 MGP_LPJ_G0003652.1 mouse_genomes_project 2 147742184 147754986 - Pcsk2os1 antisense antisense MGP_LPJ_T0004127.1 MGP_LPJ_G0003652.1 mouse_genomes_project 2 147744676 147752636 - Pcsk2os1 antisense antisense MGP_LPJ_T0102013.1 MGP_LPJ_G0040050.1 mouse_genomes_project 2 34940300 34940753 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0056037.1 MGP_LPJ_G0026098.1 mouse_genomes_project 2 93509962 93511842 - MGP_LPJ_P0056037 Mdk protein_coding protein_coding MGP_LPJ_T0056038.1 MGP_LPJ_G0026098.1 mouse_genomes_project 2 93509985 93513721 - MGP_LPJ_P0056038 Mdk protein_coding protein_coding MGP_LPJ_T0056039.1 MGP_LPJ_G0026098.1 mouse_genomes_project 2 93509985 93511931 - MGP_LPJ_P0056039 Mdk protein_coding protein_coding MGP_LPJ_T0056040.1 MGP_LPJ_G0026098.1 mouse_genomes_project 2 93510123 93511853 - MGP_LPJ_P0056040 Mdk protein_coding protein_coding MGP_LPJ_T0013373.1 MGP_LPJ_G0011464.1 mouse_genomes_project 2 1089372 1089936 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055647.1 MGP_LPJ_G0025930.1 mouse_genomes_project 2 88019855 88020788 - MGP_LPJ_P0055647 Olfr1104 protein_coding protein_coding MGP_LPJ_T0100643.1 MGP_LPJ_G0038906.1 mouse_genomes_project 2 170869445 170869576 - Gm25569 snoRNA snoRNA MGP_LPJ_T0010381.1 MGP_LPJ_G0008499.1 mouse_genomes_project 2 7784621 7784718 + Gm26092 miRNA miRNA MGP_LPJ_T0057468.1 MGP_LPJ_G0026427.1 mouse_genomes_project 2 133107121 133190798 - MGP_LPJ_P0057468 F830045P16Rik protein_coding protein_coding MGP_LPJ_T0057883.1 MGP_LPJ_G0026521.1 mouse_genomes_project 2 148611477 148617282 + Csrp2bp protein_coding processed_transcript MGP_LPJ_T0057885.1 MGP_LPJ_G0026521.1 mouse_genomes_project 2 148611499 148654528 + MGP_LPJ_P0057885 Csrp2bp protein_coding protein_coding MGP_LPJ_T0057886.1 MGP_LPJ_G0026521.1 mouse_genomes_project 2 148617691 148639068 + MGP_LPJ_P0057886 Csrp2bp protein_coding nonsense_mediated_decay MGP_LPJ_T0057887.1 MGP_LPJ_G0026521.1 mouse_genomes_project 2 148619275 148633211 + Csrp2bp protein_coding processed_transcript MGP_LPJ_T0057888.1 MGP_LPJ_G0026521.1 mouse_genomes_project 2 148619740 148647441 + Csrp2bp protein_coding processed_transcript MGP_LPJ_T0057889.1 MGP_LPJ_G0026521.1 mouse_genomes_project 2 148632928 148639133 + Csrp2bp protein_coding retained_intron MGP_LPJ_T0057890.1 MGP_LPJ_G0026521.1 mouse_genomes_project 2 148632942 148639114 + Csrp2bp protein_coding processed_transcript MGP_LPJ_T0057891.1 MGP_LPJ_G0026521.1 mouse_genomes_project 2 148649005 148654550 + Csrp2bp protein_coding retained_intron MGP_LPJ_T0057892.1 MGP_LPJ_G0026521.1 mouse_genomes_project 2 148649205 148651125 + MGP_LPJ_P0057892 Csrp2bp protein_coding protein_coding MGP_LPJ_T0057893.1 MGP_LPJ_G0026521.1 mouse_genomes_project 2 148650849 148654551 + MGP_LPJ_P0057893 Csrp2bp protein_coding protein_coding MGP_LPJ_T0007428.1 MGP_LPJ_G0006093.1 mouse_genomes_project 2 175333500 175339917 + Gm14250 lincRNA lincRNA MGP_LPJ_T0058930.1 MGP_LPJ_G0026766.1 mouse_genomes_project 2 169326425 169334425 + MGP_LPJ_P0058930 Kcnk15 protein_coding protein_coding MGP_LPJ_T0058931.1 MGP_LPJ_G0026766.1 mouse_genomes_project 2 169326507 169335229 + MGP_LPJ_P0058931 Kcnk15 protein_coding protein_coding MGP_LPJ_T0056181.1 MGP_LPJ_G0026122.1 mouse_genomes_project 2 95693205 95697438 - Alkbh3 protein_coding processed_transcript MGP_LPJ_T0056182.1 MGP_LPJ_G0026122.1 mouse_genomes_project 2 95693205 95697469 - Alkbh3 protein_coding processed_transcript MGP_LPJ_T0056183.1 MGP_LPJ_G0026122.1 mouse_genomes_project 2 95693205 95727290 - MGP_LPJ_P0056183 Alkbh3 protein_coding protein_coding MGP_LPJ_T0056184.1 MGP_LPJ_G0026122.1 mouse_genomes_project 2 95693284 95694282 - Alkbh3 protein_coding processed_transcript MGP_LPJ_T0056185.1 MGP_LPJ_G0026122.1 mouse_genomes_project 2 95693292 95727213 - MGP_LPJ_P0056185 Alkbh3 protein_coding protein_coding MGP_LPJ_T0056186.1 MGP_LPJ_G0026122.1 mouse_genomes_project 2 95708791 95726914 - Alkbh3 protein_coding processed_transcript MGP_LPJ_T0056187.1 MGP_LPJ_G0026122.1 mouse_genomes_project 2 95708860 95721680 - Alkbh3 protein_coding processed_transcript MGP_LPJ_T0056188.1 MGP_LPJ_G0026122.1 mouse_genomes_project 2 95708860 95727237 - MGP_LPJ_P0056188 Alkbh3 protein_coding protein_coding MGP_LPJ_T0056189.1 MGP_LPJ_G0026122.1 mouse_genomes_project 2 95722266 95727237 - Alkbh3 protein_coding processed_transcript MGP_LPJ_T0056190.1 MGP_LPJ_G0026122.1 mouse_genomes_project 2 95722736 95727235 - Alkbh3 protein_coding processed_transcript MGP_LPJ_T0056191.1 MGP_LPJ_G0026122.1 mouse_genomes_project 2 95724529 95727235 - Alkbh3 protein_coding processed_transcript MGP_LPJ_T0013628.1 MGP_LPJ_G0011719.1 mouse_genomes_project 2 93208574 93208812 - processed_pseudogene processed_pseudogene MGP_LPJ_T0056497.1 MGP_LPJ_G0026187.1 mouse_genomes_project 2 113269639 113289085 + MGP_LPJ_P0056497 Muc15 protein_coding protein_coding MGP_LPJ_T0056498.1 MGP_LPJ_G0026187.1 mouse_genomes_project 2 113269910 113289085 + MGP_LPJ_P0056498 Muc15 protein_coding protein_coding MGP_LPJ_T0056499.1 MGP_LPJ_G0026187.1 mouse_genomes_project 2 113269947 113287155 + MGP_LPJ_P0056499 Muc15 protein_coding protein_coding MGP_LPJ_T0052621.1 MGP_LPJ_G0025308.1 mouse_genomes_project 2 16245978 16250708 + Spag6 protein_coding processed_transcript MGP_LPJ_T0052622.1 MGP_LPJ_G0025308.1 mouse_genomes_project 2 16245998 16250861 + Spag6 protein_coding processed_transcript MGP_LPJ_T0052623.1 MGP_LPJ_G0025308.1 mouse_genomes_project 2 16250846 16305514 + MGP_LPJ_P0052623 Spag6 protein_coding protein_coding MGP_LPJ_T0052624.1 MGP_LPJ_G0025308.1 mouse_genomes_project 2 16250907 16286425 + MGP_LPJ_P0052624 Spag6 protein_coding protein_coding MGP_LPJ_T0053625.1 MGP_LPJ_G0025489.1 mouse_genomes_project 2 28313981 28337148 - MGP_LPJ_P0053625 Kyat1 protein_coding protein_coding MGP_LPJ_T0053626.1 MGP_LPJ_G0025489.1 mouse_genomes_project 2 28313983 28337117 - Kyat1 protein_coding processed_transcript MGP_LPJ_T0053627.1 MGP_LPJ_G0025489.1 mouse_genomes_project 2 28313983 28337076 - MGP_LPJ_P0053627 Kyat1 protein_coding protein_coding MGP_LPJ_T0053628.1 MGP_LPJ_G0025489.1 mouse_genomes_project 2 28313988 28328984 - MGP_LPJ_P0053628 Kyat1 protein_coding protein_coding MGP_LPJ_T0053629.1 MGP_LPJ_G0025489.1 mouse_genomes_project 2 28313988 28337102 - MGP_LPJ_P0053629 Kyat1 protein_coding protein_coding MGP_LPJ_T0053630.1 MGP_LPJ_G0025489.1 mouse_genomes_project 2 28314125 28322934 - MGP_LPJ_P0053630 Kyat1 protein_coding protein_coding MGP_LPJ_T0053631.1 MGP_LPJ_G0025489.1 mouse_genomes_project 2 28314125 28322934 - MGP_LPJ_P0053631 Kyat1 protein_coding protein_coding MGP_LPJ_T0053632.1 MGP_LPJ_G0025489.1 mouse_genomes_project 2 28319979 28337090 - Kyat1 protein_coding processed_transcript MGP_LPJ_T0056327.1 MGP_LPJ_G0026148.1 mouse_genomes_project 2 106103688 106164046 - 4931422A03Rik protein_coding processed_transcript MGP_LPJ_T0056334.1 MGP_LPJ_G0026148.1 mouse_genomes_project 2 106130927 106164555 - MGP_LPJ_P0056334 4931422A03Rik protein_coding protein_coding MGP_LPJ_T0056335.1 MGP_LPJ_G0026148.1 mouse_genomes_project 2 106162023 106164608 - 4931422A03Rik protein_coding retained_intron MGP_LPJ_T0055722.1 MGP_LPJ_G0025994.1 mouse_genomes_project 2 89754638 89755574 + MGP_LPJ_P0055722 Olfr1184 protein_coding protein_coding MGP_LPJ_T0054438.1 MGP_LPJ_G0025638.1 mouse_genomes_project 2 37671907 37681396 + MGP_LPJ_P0054438 Wdr38 protein_coding nonsense_mediated_decay MGP_LPJ_T0054439.1 MGP_LPJ_G0025638.1 mouse_genomes_project 2 37672750 37676014 + MGP_LPJ_P0054439 Wdr38 protein_coding protein_coding MGP_LPJ_T0054440.1 MGP_LPJ_G0025638.1 mouse_genomes_project 2 37672763 37674706 + Wdr38 protein_coding processed_transcript MGP_LPJ_T0055665.1 MGP_LPJ_G0025948.1 mouse_genomes_project 2 88527217 88529193 + MGP_LPJ_P0055665 Olfr1126 protein_coding protein_coding MGP_LPJ_T0099353.1 MGP_LPJ_G0037616.1 mouse_genomes_project 2 131644290 131644427 + Gm23101 snRNA snRNA MGP_LPJ_T0100635.1 MGP_LPJ_G0038898.1 mouse_genomes_project 2 163521059 163521172 - Gm26003 snoRNA snoRNA MGP_LPJ_T0056392.1 MGP_LPJ_G0026165.1 mouse_genomes_project 2 107349846 107351608 + MGP_LPJ_P0056392 Gm11060 protein_coding protein_coding MGP_LPJ_T0013750.1 MGP_LPJ_G0011841.1 mouse_genomes_project 2 147710170 147710819 - processed_pseudogene processed_pseudogene MGP_LPJ_T0052692.1 MGP_LPJ_G0025322.1 mouse_genomes_project 2 20279515 20352749 + MGP_LPJ_P0052692 Gad2 protein_coding protein_coding MGP_LPJ_T0052693.1 MGP_LPJ_G0025322.1 mouse_genomes_project 2 20280625 20287323 + Gad2 protein_coding processed_transcript MGP_LPJ_T0010479.1 MGP_LPJ_G0008597.1 mouse_genomes_project 2 133696920 133697037 - Mir6339 miRNA miRNA MGP_LPJ_T0001122.1 MGP_LPJ_G0001047.1 mouse_genomes_project 2 86422773 86428844 + TEC TEC MGP_LPJ_T0053332.1 MGP_LPJ_G0025439.1 mouse_genomes_project 2 24977375 24988941 - MGP_LPJ_P0053332 Tmem8c protein_coding protein_coding MGP_LPJ_T0053333.1 MGP_LPJ_G0025439.1 mouse_genomes_project 2 24977377 24984630 - MGP_LPJ_P0053333 Tmem8c protein_coding protein_coding MGP_LPJ_T0013415.1 MGP_LPJ_G0011506.1 mouse_genomes_project 2 16678918 16680316 - processed_pseudogene processed_pseudogene MGP_LPJ_T0052233.1 MGP_LPJ_G0025245.1 mouse_genomes_project 2 1762670 1845770 + MGP_LPJ_P0052233 Bend7 protein_coding protein_coding MGP_LPJ_T0052234.1 MGP_LPJ_G0025245.1 mouse_genomes_project 2 1762673 1834124 + MGP_LPJ_P0052234 Bend7 protein_coding protein_coding MGP_LPJ_T0052235.1 MGP_LPJ_G0025245.1 mouse_genomes_project 2 1762984 1846132 + MGP_LPJ_P0052235 Bend7 protein_coding protein_coding MGP_LPJ_T0052236.1 MGP_LPJ_G0025245.1 mouse_genomes_project 2 1797384 1847349 + Bend7 protein_coding processed_transcript MGP_LPJ_T0004054.1 MGP_LPJ_G0003605.1 mouse_genomes_project 2 104097001 104125115 + Gm13919 antisense antisense MGP_LPJ_T0004055.1 MGP_LPJ_G0003605.1 mouse_genomes_project 2 104097009 104099634 + Gm13919 antisense antisense MGP_LPJ_T0054000.1 MGP_LPJ_G0025543.1 mouse_genomes_project 2 30925009 30926020 + Pip5kl1 protein_coding processed_transcript MGP_LPJ_T0054001.1 MGP_LPJ_G0025543.1 mouse_genomes_project 2 30925930 30935494 + MGP_LPJ_P0054001 Pip5kl1 protein_coding protein_coding MGP_LPJ_T0054002.1 MGP_LPJ_G0025543.1 mouse_genomes_project 2 30926055 30935483 + MGP_LPJ_P0054002 Pip5kl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0054003.1 MGP_LPJ_G0025543.1 mouse_genomes_project 2 30931638 30935484 + Pip5kl1 protein_coding retained_intron MGP_LPJ_T0053427.1 MGP_LPJ_G0025460.1 mouse_genomes_project 2 26662715 26695203 + MGP_LPJ_P0053427 Tsc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053428.1 MGP_LPJ_G0025460.1 mouse_genomes_project 2 26662724 26713728 + MGP_LPJ_P0053428 Tsc1 protein_coding protein_coding MGP_LPJ_T0053429.1 MGP_LPJ_G0025460.1 mouse_genomes_project 2 26662728 26711109 + MGP_LPJ_P0053429 Tsc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053430.1 MGP_LPJ_G0025460.1 mouse_genomes_project 2 26662728 26713728 + MGP_LPJ_P0053430 Tsc1 protein_coding protein_coding MGP_LPJ_T0053431.1 MGP_LPJ_G0025460.1 mouse_genomes_project 2 26662730 26713728 + MGP_LPJ_P0053431 Tsc1 protein_coding protein_coding MGP_LPJ_T0053432.1 MGP_LPJ_G0025460.1 mouse_genomes_project 2 26662737 26696449 + Tsc1 protein_coding retained_intron MGP_LPJ_T0053433.1 MGP_LPJ_G0025460.1 mouse_genomes_project 2 26662741 26690654 + Tsc1 protein_coding retained_intron MGP_LPJ_T0053434.1 MGP_LPJ_G0025460.1 mouse_genomes_project 2 26681242 26713728 + MGP_LPJ_P0053434 Tsc1 protein_coding protein_coding MGP_LPJ_T0053435.1 MGP_LPJ_G0025460.1 mouse_genomes_project 2 26686087 26688660 + Tsc1 protein_coding retained_intron MGP_LPJ_T0053436.1 MGP_LPJ_G0025460.1 mouse_genomes_project 2 26693709 26695883 + Tsc1 protein_coding retained_intron MGP_LPJ_T0053437.1 MGP_LPJ_G0025460.1 mouse_genomes_project 2 26694973 26696025 + Tsc1 protein_coding retained_intron MGP_LPJ_T0007342.1 MGP_LPJ_G0006021.1 mouse_genomes_project 2 136226288 136260419 + 4921508D12Rik lincRNA lincRNA MGP_LPJ_T0000377.1 MGP_LPJ_G0000315.1 mouse_genomes_project 2 20243146 20243216 - mt-Td Mt_tRNA Mt_tRNA MGP_LPJ_T0007232.1 MGP_LPJ_G0005934.1 mouse_genomes_project 2 71782035 71789611 + Gm13647 lincRNA lincRNA MGP_LPJ_T0001124.1 MGP_LPJ_G0001049.1 mouse_genomes_project 2 105475982 105479386 - TEC TEC MGP_LPJ_T0013522.1 MGP_LPJ_G0011613.1 mouse_genomes_project 2 58318652 58318981 + processed_pseudogene processed_pseudogene MGP_LPJ_T0055777.1 MGP_LPJ_G0026040.1 mouse_genomes_project 2 90833302 90834413 - MGP_LPJ_P0055777 Olfr1243 protein_coding protein_coding MGP_LPJ_T0055778.1 MGP_LPJ_G0026040.1 mouse_genomes_project 2 90834061 90837061 - Olfr1243 protein_coding processed_transcript MGP_LPJ_T0052870.1 MGP_LPJ_G0025351.1 mouse_genomes_project 2 22886400 22895883 - MGP_LPJ_P0052870 Noxa1 protein_coding protein_coding MGP_LPJ_T0052871.1 MGP_LPJ_G0025351.1 mouse_genomes_project 2 22886400 22895865 - MGP_LPJ_P0052871 Noxa1 protein_coding protein_coding MGP_LPJ_T0007307.1 MGP_LPJ_G0005995.1 mouse_genomes_project 2 117731845 118063791 - lincRNA lincRNA MGP_LPJ_T0013751.1 MGP_LPJ_G0011842.1 mouse_genomes_project 2 148072096 148072524 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013613.1 MGP_LPJ_G0011704.1 mouse_genomes_project 2 88382284 88382516 - processed_pseudogene processed_pseudogene MGP_LPJ_T0059141.1 MGP_LPJ_G0026828.1 mouse_genomes_project 2 170999960 171007748 - MGP_LPJ_P0059141 Ocstamp protein_coding protein_coding MGP_LPJ_T0000378.1 MGP_LPJ_G0000316.1 mouse_genomes_project 2 20243219 20243288 + mt-Ts1 Mt_tRNA Mt_tRNA MGP_LPJ_T0059379.1 MGP_LPJ_G0026880.1 mouse_genomes_project 2 178554717 178564234 - MGP_LPJ_P0059379 Gcnt7 protein_coding protein_coding MGP_LPJ_T0059380.1 MGP_LPJ_G0026880.1 mouse_genomes_project 2 178554718 178559166 - MGP_LPJ_P0059380 Gcnt7 protein_coding protein_coding MGP_LPJ_T0004007.1 MGP_LPJ_G0003574.1 mouse_genomes_project 2 69047329 69071760 + Gm13613 antisense antisense MGP_LPJ_T0052757.1 MGP_LPJ_G0025338.1 mouse_genomes_project 2 22016916 22019574 + MGP_LPJ_P0052757 Il1f10 protein_coding protein_coding MGP_LPJ_T0056106.1 MGP_LPJ_G0026107.1 mouse_genomes_project 2 94031406 94061880 - MGP_LPJ_P0056106 Cry2 protein_coding protein_coding MGP_LPJ_T0056107.1 MGP_LPJ_G0026107.1 mouse_genomes_project 2 94039020 94061873 - MGP_LPJ_P0056107 Cry2 protein_coding protein_coding MGP_LPJ_T0056108.1 MGP_LPJ_G0026107.1 mouse_genomes_project 2 94052914 94061873 - Cry2 protein_coding processed_transcript MGP_LPJ_T0056109.1 MGP_LPJ_G0026107.1 mouse_genomes_project 2 94054664 94060139 - Cry2 protein_coding processed_transcript MGP_LPJ_T0059266.1 MGP_LPJ_G0026848.1 mouse_genomes_project 2 173245590 173270764 + MGP_LPJ_P0059266 Rnf114 protein_coding protein_coding MGP_LPJ_T0059267.1 MGP_LPJ_G0026848.1 mouse_genomes_project 2 173256048 173270771 + MGP_LPJ_P0059267 Rnf114 protein_coding protein_coding MGP_LPJ_T0059268.1 MGP_LPJ_G0026848.1 mouse_genomes_project 2 173256405 173270762 + MGP_LPJ_P0059268 Rnf114 protein_coding nonsense_mediated_decay MGP_LPJ_T0011501.1 MGP_LPJ_G0009619.1 mouse_genomes_project 2 5613984 5614275 - Gm24534 misc_RNA misc_RNA MGP_LPJ_T0055868.1 MGP_LPJ_G0026076.1 mouse_genomes_project 2 92441659 92492944 + Celf1 protein_coding processed_transcript MGP_LPJ_T0055869.1 MGP_LPJ_G0026076.1 mouse_genomes_project 2 92441674 92526627 + MGP_LPJ_P0055869 Celf1 protein_coding protein_coding MGP_LPJ_T0055870.1 MGP_LPJ_G0026076.1 mouse_genomes_project 2 92441735 92503876 + Celf1 protein_coding processed_transcript MGP_LPJ_T0055871.1 MGP_LPJ_G0026076.1 mouse_genomes_project 2 92441814 92506748 + Celf1 protein_coding processed_transcript MGP_LPJ_T0055872.1 MGP_LPJ_G0026076.1 mouse_genomes_project 2 92443152 92520497 + MGP_LPJ_P0055872 Celf1 protein_coding protein_coding MGP_LPJ_T0055873.1 MGP_LPJ_G0026076.1 mouse_genomes_project 2 92468344 92493006 + Celf1 protein_coding processed_transcript MGP_LPJ_T0055874.1 MGP_LPJ_G0026076.1 mouse_genomes_project 2 92492935 92526620 + MGP_LPJ_P0055874 Celf1 protein_coding protein_coding MGP_LPJ_T0055875.1 MGP_LPJ_G0026076.1 mouse_genomes_project 2 92503838 92526627 + MGP_LPJ_P0055875 Celf1 protein_coding protein_coding MGP_LPJ_T0055876.1 MGP_LPJ_G0026076.1 mouse_genomes_project 2 92519623 92520504 + Celf1 protein_coding processed_transcript MGP_LPJ_T0056343.1 MGP_LPJ_G0026151.1 mouse_genomes_project 2 106206649 106207122 + MGP_LPJ_P0056343 protein_coding protein_coding MGP_LPJ_T0007183.1 MGP_LPJ_G0005893.1 mouse_genomes_project 2 28830255 28842478 - Gm14486 lincRNA lincRNA MGP_LPJ_T0007184.1 MGP_LPJ_G0005893.1 mouse_genomes_project 2 28830400 28850582 - Gm14486 lincRNA lincRNA MGP_LPJ_T0057995.1 MGP_LPJ_G0026547.1 mouse_genomes_project 2 153163042 153176145 + MGP_LPJ_P0057995 Gzf1 protein_coding protein_coding MGP_LPJ_T0057996.1 MGP_LPJ_G0026547.1 mouse_genomes_project 2 153163230 153166069 + MGP_LPJ_P0057996 Gzf1 protein_coding protein_coding MGP_LPJ_T0057997.1 MGP_LPJ_G0026547.1 mouse_genomes_project 2 153166631 153173411 + Gzf1 protein_coding processed_transcript MGP_LPJ_T0013742.1 MGP_LPJ_G0011833.1 mouse_genomes_project 2 144184759 144185140 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102014.1 MGP_LPJ_G0040051.1 mouse_genomes_project 2 35131357 35131660 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0057560.1 MGP_LPJ_G0026452.1 mouse_genomes_project 2 134379091 134397589 + MGP_LPJ_P0057560 Itpa protein_coding protein_coding MGP_LPJ_T0057561.1 MGP_LPJ_G0026452.1 mouse_genomes_project 2 134379286 134391990 + Itpa protein_coding retained_intron MGP_LPJ_T0057562.1 MGP_LPJ_G0026452.1 mouse_genomes_project 2 134379289 134391697 + Itpa protein_coding processed_transcript MGP_LPJ_T0057563.1 MGP_LPJ_G0026452.1 mouse_genomes_project 2 134379307 134383585 + Itpa protein_coding retained_intron MGP_LPJ_T0057564.1 MGP_LPJ_G0026452.1 mouse_genomes_project 2 134379346 134397007 + Itpa protein_coding processed_transcript MGP_LPJ_T0017754.1 MGP_LPJ_G0015358.1 mouse_genomes_project 2 92715967 92725061 - Gm13783 processed_transcript processed_transcript MGP_LPJ_T0052983.1 MGP_LPJ_G0025375.1 mouse_genomes_project 2 23227221 23234213 + Npdc1 protein_coding processed_transcript MGP_LPJ_T0052984.1 MGP_LPJ_G0025375.1 mouse_genomes_project 2 23228339 23236051 + Npdc1 protein_coding processed_transcript MGP_LPJ_T0052985.1 MGP_LPJ_G0025375.1 mouse_genomes_project 2 23230943 23239378 + MGP_LPJ_P0052985 Npdc1 protein_coding protein_coding MGP_LPJ_T0052986.1 MGP_LPJ_G0025375.1 mouse_genomes_project 2 23230979 23234721 + Npdc1 protein_coding processed_transcript MGP_LPJ_T0052987.1 MGP_LPJ_G0025375.1 mouse_genomes_project 2 23231041 23235720 + MGP_LPJ_P0052987 Npdc1 protein_coding protein_coding MGP_LPJ_T0052988.1 MGP_LPJ_G0025375.1 mouse_genomes_project 2 23231043 23239378 + MGP_LPJ_P0052988 Npdc1 protein_coding protein_coding MGP_LPJ_T0052989.1 MGP_LPJ_G0025375.1 mouse_genomes_project 2 23231066 23236188 + MGP_LPJ_P0052989 Npdc1 protein_coding protein_coding MGP_LPJ_T0052990.1 MGP_LPJ_G0025375.1 mouse_genomes_project 2 23231111 23234984 + Npdc1 protein_coding processed_transcript MGP_LPJ_T0052991.1 MGP_LPJ_G0025375.1 mouse_genomes_project 2 23231320 23235876 + Npdc1 protein_coding processed_transcript MGP_LPJ_T0052992.1 MGP_LPJ_G0025375.1 mouse_genomes_project 2 23231957 23239375 + Npdc1 protein_coding processed_transcript MGP_LPJ_T0052993.1 MGP_LPJ_G0025375.1 mouse_genomes_project 2 23234179 23239378 + MGP_LPJ_P0052993 Npdc1 protein_coding protein_coding MGP_LPJ_T0052994.1 MGP_LPJ_G0025375.1 mouse_genomes_project 2 23235154 23239140 + Npdc1 protein_coding processed_transcript MGP_LPJ_T0052995.1 MGP_LPJ_G0025375.1 mouse_genomes_project 2 23235564 23239372 + Npdc1 protein_coding processed_transcript MGP_LPJ_T0052996.1 MGP_LPJ_G0025375.1 mouse_genomes_project 2 23238756 23239375 + Npdc1 protein_coding processed_transcript MGP_LPJ_T0056830.1 MGP_LPJ_G0026293.1 mouse_genomes_project 2 123141178 123156553 + MGP_LPJ_P0056830 Gm28042 protein_coding nonsense_mediated_decay MGP_LPJ_T0056832.1 MGP_LPJ_G0026293.1 mouse_genomes_project 2 123141189 123156553 + MGP_LPJ_P0056832 Gm28042 protein_coding protein_coding MGP_LPJ_T0056833.1 MGP_LPJ_G0026293.1 mouse_genomes_project 2 123141192 123155119 + MGP_LPJ_P0056833 Gm28042 protein_coding protein_coding MGP_LPJ_T0056837.1 MGP_LPJ_G0026293.1 mouse_genomes_project 2 123145393 123148531 + MGP_LPJ_P0056837 Gm28042 protein_coding nonsense_mediated_decay MGP_LPJ_T0007368.1 MGP_LPJ_G0006043.1 mouse_genomes_project 2 154252526 154309634 - Gm14133 lincRNA lincRNA MGP_LPJ_T0007369.1 MGP_LPJ_G0006043.1 mouse_genomes_project 2 154262912 154309676 - Gm14133 lincRNA lincRNA MGP_LPJ_T0059361.1 MGP_LPJ_G0026871.1 mouse_genomes_project 2 176592116 176617669 - MGP_LPJ_P0059361 4930470P17Rik protein_coding protein_coding MGP_LPJ_T0058527.1 MGP_LPJ_G0026690.1 mouse_genomes_project 2 161018155 161051079 - MGP_LPJ_P0058527 Fer1l4 protein_coding protein_coding MGP_LPJ_T0058528.1 MGP_LPJ_G0026690.1 mouse_genomes_project 2 161018156 161023903 - Fer1l4 protein_coding retained_intron MGP_LPJ_T0058529.1 MGP_LPJ_G0026690.1 mouse_genomes_project 2 161018157 161034831 - Fer1l4 protein_coding retained_intron MGP_LPJ_T0058530.1 MGP_LPJ_G0026690.1 mouse_genomes_project 2 161027764 161029823 - MGP_LPJ_P0058530 Fer1l4 protein_coding protein_coding MGP_LPJ_T0058531.1 MGP_LPJ_G0026690.1 mouse_genomes_project 2 161027913 161029825 - Fer1l4 protein_coding retained_intron MGP_LPJ_T0058532.1 MGP_LPJ_G0026690.1 mouse_genomes_project 2 161033205 161035566 - MGP_LPJ_P0058532 Fer1l4 protein_coding nonsense_mediated_decay MGP_LPJ_T0055020.1 MGP_LPJ_G0025740.1 mouse_genomes_project 2 69729774 69746776 - MGP_LPJ_P0055020 Mettl5 protein_coding protein_coding MGP_LPJ_T0055021.1 MGP_LPJ_G0025740.1 mouse_genomes_project 2 69729790 69746758 - MGP_LPJ_P0055021 Mettl5 protein_coding nonsense_mediated_decay MGP_LPJ_T0055022.1 MGP_LPJ_G0025740.1 mouse_genomes_project 2 69729794 69733545 - Mettl5 protein_coding retained_intron MGP_LPJ_T0055023.1 MGP_LPJ_G0025740.1 mouse_genomes_project 2 69737799 69746765 - Mettl5 protein_coding retained_intron MGP_LPJ_T0010379.1 MGP_LPJ_G0008497.1 mouse_genomes_project 2 7784085 7784194 + Mir297b miRNA miRNA MGP_LPJ_T0007272.1 MGP_LPJ_G0005967.1 mouse_genomes_project 2 93652370 93656751 - 2900072N19Rik lincRNA lincRNA MGP_LPJ_T0055716.1 MGP_LPJ_G0025988.1 mouse_genomes_project 2 89634633 89635557 - MGP_LPJ_P0055716 Olfr1179 protein_coding protein_coding MGP_LPJ_T0057974.1 MGP_LPJ_G0026538.1 mouse_genomes_project 2 151400916 151469295 + MGP_LPJ_P0057974 Xrn2 protein_coding protein_coding MGP_LPJ_T0057975.1 MGP_LPJ_G0026538.1 mouse_genomes_project 2 151418431 151427063 + Xrn2 protein_coding retained_intron MGP_LPJ_T0057976.1 MGP_LPJ_G0026538.1 mouse_genomes_project 2 151431321 151436536 + Xrn2 protein_coding retained_intron MGP_LPJ_T0057977.1 MGP_LPJ_G0026538.1 mouse_genomes_project 2 151450852 151458313 + Xrn2 protein_coding retained_intron MGP_LPJ_T0058685.1 MGP_LPJ_G0026711.1 mouse_genomes_project 2 162081723 162148933 - MGP_LPJ_P0058685 Soga1 protein_coding protein_coding MGP_LPJ_T0058686.1 MGP_LPJ_G0026711.1 mouse_genomes_project 2 162088309 162094932 - Soga1 protein_coding processed_transcript MGP_LPJ_T0058687.1 MGP_LPJ_G0026711.1 mouse_genomes_project 2 162104149 162107294 - Soga1 protein_coding processed_transcript MGP_LPJ_T0011541.1 MGP_LPJ_G0009659.1 mouse_genomes_project 2 180551740 180551865 + Gm27849 misc_RNA misc_RNA MGP_LPJ_T0056537.1 MGP_LPJ_G0026221.1 mouse_genomes_project 2 114972594 114984806 - MGP_LPJ_P0056537 Nutm1 protein_coding protein_coding MGP_LPJ_T0056630.1 MGP_LPJ_G0026246.1 mouse_genomes_project 2 120234025 120303160 - MGP_LPJ_P0056630 Rasgrp1 protein_coding protein_coding MGP_LPJ_T0056631.1 MGP_LPJ_G0026246.1 mouse_genomes_project 2 120234026 120303036 - MGP_LPJ_P0056631 Rasgrp1 protein_coding protein_coding MGP_LPJ_T0056632.1 MGP_LPJ_G0026246.1 mouse_genomes_project 2 120236576 120302868 - MGP_LPJ_P0056632 Rasgrp1 protein_coding protein_coding MGP_LPJ_T0056633.1 MGP_LPJ_G0026246.1 mouse_genomes_project 2 120236576 120302868 - MGP_LPJ_P0056633 Rasgrp1 protein_coding protein_coding MGP_LPJ_T0056634.1 MGP_LPJ_G0026246.1 mouse_genomes_project 2 120236576 120302868 - MGP_LPJ_P0056634 Rasgrp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0056635.1 MGP_LPJ_G0026246.1 mouse_genomes_project 2 120236576 120302868 - MGP_LPJ_P0056635 Rasgrp1 protein_coding protein_coding MGP_LPJ_T0056636.1 MGP_LPJ_G0026246.1 mouse_genomes_project 2 120255368 120303084 - Rasgrp1 protein_coding retained_intron MGP_LPJ_T0057311.1 MGP_LPJ_G0026385.1 mouse_genomes_project 2 130511809 130541319 + Ap4e1 protein_coding retained_intron MGP_LPJ_T0057312.1 MGP_LPJ_G0026385.1 mouse_genomes_project 2 130511813 130516656 + Ap4e1 protein_coding retained_intron MGP_LPJ_T0057313.1 MGP_LPJ_G0026385.1 mouse_genomes_project 2 130511816 130548804 + MGP_LPJ_P0057313 Ap4e1 protein_coding protein_coding MGP_LPJ_T0057314.1 MGP_LPJ_G0026385.1 mouse_genomes_project 2 130511822 130572445 + MGP_LPJ_P0057314 Ap4e1 protein_coding protein_coding MGP_LPJ_T0057315.1 MGP_LPJ_G0026385.1 mouse_genomes_project 2 130511844 130532066 + MGP_LPJ_P0057315 Ap4e1 protein_coding nonsense_mediated_decay MGP_LPJ_T0057316.1 MGP_LPJ_G0026385.1 mouse_genomes_project 2 130511846 130564961 + MGP_LPJ_P0057316 Ap4e1 protein_coding nonsense_mediated_decay MGP_LPJ_T0057317.1 MGP_LPJ_G0026385.1 mouse_genomes_project 2 130511846 130551121 + MGP_LPJ_P0057317 Ap4e1 protein_coding nonsense_mediated_decay MGP_LPJ_T0057318.1 MGP_LPJ_G0026385.1 mouse_genomes_project 2 130553290 130564790 + MGP_LPJ_P0057318 Ap4e1 protein_coding nonsense_mediated_decay MGP_LPJ_T0013510.1 MGP_LPJ_G0011601.1 mouse_genomes_project 2 53636785 53637336 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055937.1 MGP_LPJ_G0026083.1 mouse_genomes_project 2 92704319 92715088 - Nr1h3 protein_coding retained_intron MGP_LPJ_T0055938.1 MGP_LPJ_G0026083.1 mouse_genomes_project 2 92704319 92715179 - MGP_LPJ_P0055938 Nr1h3 protein_coding protein_coding MGP_LPJ_T0055939.1 MGP_LPJ_G0026083.1 mouse_genomes_project 2 92704319 92715098 - MGP_LPJ_P0055939 Nr1h3 protein_coding protein_coding MGP_LPJ_T0055940.1 MGP_LPJ_G0026083.1 mouse_genomes_project 2 92704350 92715214 - MGP_LPJ_P0055940 Nr1h3 protein_coding protein_coding MGP_LPJ_T0055941.1 MGP_LPJ_G0026083.1 mouse_genomes_project 2 92704350 92714948 - MGP_LPJ_P0055941 Nr1h3 protein_coding protein_coding MGP_LPJ_T0055942.1 MGP_LPJ_G0026083.1 mouse_genomes_project 2 92704464 92712821 - Nr1h3 protein_coding retained_intron MGP_LPJ_T0055943.1 MGP_LPJ_G0026083.1 mouse_genomes_project 2 92710443 92711194 - Nr1h3 protein_coding retained_intron MGP_LPJ_T0055944.1 MGP_LPJ_G0026083.1 mouse_genomes_project 2 92712107 92725117 - Nr1h3 protein_coding processed_transcript MGP_LPJ_T0057229.1 MGP_LPJ_G0026366.1 mouse_genomes_project 2 128714686 128924883 - MGP_LPJ_P0057229 Fbn1 protein_coding protein_coding MGP_LPJ_T0057230.1 MGP_LPJ_G0026366.1 mouse_genomes_project 2 128714719 128926491 - MGP_LPJ_P0057230 Fbn1 protein_coding protein_coding MGP_LPJ_T0057231.1 MGP_LPJ_G0026366.1 mouse_genomes_project 2 128806954 128924570 - Fbn1 protein_coding retained_intron MGP_LPJ_T0053423.1 MGP_LPJ_G0025459.1 mouse_genomes_project 2 26629360 26641899 - MGP_LPJ_P0053423 Gfi1b protein_coding protein_coding MGP_LPJ_T0053424.1 MGP_LPJ_G0025459.1 mouse_genomes_project 2 26629365 26641862 - MGP_LPJ_P0053424 Gfi1b protein_coding protein_coding MGP_LPJ_T0053425.1 MGP_LPJ_G0025459.1 mouse_genomes_project 2 26634685 26635307 - Gfi1b protein_coding processed_transcript MGP_LPJ_T0053426.1 MGP_LPJ_G0025459.1 mouse_genomes_project 2 26634692 26641899 - Gfi1b protein_coding processed_transcript MGP_LPJ_T0010482.1 MGP_LPJ_G0008600.1 mouse_genomes_project 2 135037593 135037679 + Mir103-2 miRNA miRNA MGP_LPJ_T0057612.1 MGP_LPJ_G0026458.1 mouse_genomes_project 2 134814753 134832185 - MGP_LPJ_P0057612 Siglec1 protein_coding protein_coding MGP_LPJ_T0057613.1 MGP_LPJ_G0026458.1 mouse_genomes_project 2 134817587 134832185 - MGP_LPJ_P0057613 Siglec1 protein_coding protein_coding MGP_LPJ_T0057614.1 MGP_LPJ_G0026458.1 mouse_genomes_project 2 134828992 134832185 - MGP_LPJ_P0057614 Siglec1 protein_coding protein_coding MGP_LPJ_T0058735.1 MGP_LPJ_G0026722.1 mouse_genomes_project 2 163108684 163158750 - MGP_LPJ_P0058735 Tti1 protein_coding protein_coding MGP_LPJ_T0058736.1 MGP_LPJ_G0026722.1 mouse_genomes_project 2 163108693 163136218 - MGP_LPJ_P0058736 Tti1 protein_coding protein_coding MGP_LPJ_T0058737.1 MGP_LPJ_G0026722.1 mouse_genomes_project 2 163122162 163134068 - Tti1 protein_coding processed_transcript MGP_LPJ_T0058738.1 MGP_LPJ_G0026722.1 mouse_genomes_project 2 163135625 163138995 - MGP_LPJ_P0058738 Tti1 protein_coding protein_coding MGP_LPJ_T0052171.1 MGP_LPJ_G0025237.1 mouse_genomes_project 2 382607 396158 - MGP_LPJ_P0052171 Meig1 protein_coding protein_coding MGP_LPJ_T0052172.1 MGP_LPJ_G0025237.1 mouse_genomes_project 2 382607 392549 - MGP_LPJ_P0052172 Meig1 protein_coding protein_coding MGP_LPJ_T0052173.1 MGP_LPJ_G0025237.1 mouse_genomes_project 2 382610 392571 - MGP_LPJ_P0052173 Meig1 protein_coding protein_coding MGP_LPJ_T0052174.1 MGP_LPJ_G0025237.1 mouse_genomes_project 2 382611 392659 - MGP_LPJ_P0052174 Meig1 protein_coding protein_coding MGP_LPJ_T0052175.1 MGP_LPJ_G0025237.1 mouse_genomes_project 2 382674 392117 - MGP_LPJ_P0052175 Meig1 protein_coding protein_coding MGP_LPJ_T0052176.1 MGP_LPJ_G0025237.1 mouse_genomes_project 2 382831 396104 - MGP_LPJ_P0052176 Meig1 protein_coding protein_coding MGP_LPJ_T0100566.1 MGP_LPJ_G0038829.1 mouse_genomes_project 2 24543898 24544025 - Snora43 snoRNA snoRNA MGP_LPJ_T0055365.1 MGP_LPJ_G0025808.1 mouse_genomes_project 2 79637816 79640243 + Itga4 protein_coding processed_transcript MGP_LPJ_T0055366.1 MGP_LPJ_G0025808.1 mouse_genomes_project 2 79637890 79719448 + MGP_LPJ_P0055366 Itga4 protein_coding protein_coding MGP_LPJ_T0055367.1 MGP_LPJ_G0025808.1 mouse_genomes_project 2 79637962 79656825 + Itga4 protein_coding processed_transcript MGP_LPJ_T0055368.1 MGP_LPJ_G0025808.1 mouse_genomes_project 2 79638111 79676289 + Itga4 protein_coding processed_transcript MGP_LPJ_T0055369.1 MGP_LPJ_G0025808.1 mouse_genomes_project 2 79638337 79675993 + Itga4 protein_coding processed_transcript MGP_LPJ_T0056717.1 MGP_LPJ_G0026267.1 mouse_genomes_project 2 122161336 122170294 + MGP_LPJ_P0056717 Rad51 protein_coding protein_coding MGP_LPJ_T0056718.1 MGP_LPJ_G0026267.1 mouse_genomes_project 2 122161350 122183444 + MGP_LPJ_P0056718 Rad51 protein_coding protein_coding MGP_LPJ_T0056719.1 MGP_LPJ_G0026267.1 mouse_genomes_project 2 122161357 122179757 + Rad51 protein_coding retained_intron MGP_LPJ_T0056720.1 MGP_LPJ_G0026267.1 mouse_genomes_project 2 122161360 122183192 + MGP_LPJ_P0056720 Rad51 protein_coding nonsense_mediated_decay MGP_LPJ_T0056721.1 MGP_LPJ_G0026267.1 mouse_genomes_project 2 122167258 122168710 + Rad51 protein_coding retained_intron MGP_LPJ_T0056722.1 MGP_LPJ_G0026267.1 mouse_genomes_project 2 122170250 122194703 + MGP_LPJ_P0056722 Rad51 protein_coding protein_coding MGP_LPJ_T0056723.1 MGP_LPJ_G0026267.1 mouse_genomes_project 2 122177667 122180617 + Rad51 protein_coding retained_intron MGP_LPJ_T0056724.1 MGP_LPJ_G0026267.1 mouse_genomes_project 2 122180323 122181370 + Rad51 protein_coding retained_intron MGP_LPJ_T0057397.1 MGP_LPJ_G0026407.1 mouse_genomes_project 2 131336984 131370163 - MGP_LPJ_P0057397 Bub1 protein_coding protein_coding MGP_LPJ_T0057398.1 MGP_LPJ_G0026407.1 mouse_genomes_project 2 131340364 131341127 - Bub1 protein_coding retained_intron MGP_LPJ_T0057399.1 MGP_LPJ_G0026407.1 mouse_genomes_project 2 131345443 131351336 - Bub1 protein_coding processed_transcript MGP_LPJ_T0057400.1 MGP_LPJ_G0026407.1 mouse_genomes_project 2 131348006 131352387 - Bub1 protein_coding processed_transcript MGP_LPJ_T0057401.1 MGP_LPJ_G0026407.1 mouse_genomes_project 2 131361492 131370102 - Bub1 protein_coding retained_intron MGP_LPJ_T0010374.1 MGP_LPJ_G0008492.1 mouse_genomes_project 2 7781683 7782403 + miRNA miRNA MGP_LPJ_T0013449.1 MGP_LPJ_G0011540.1 mouse_genomes_project 2 32096807 32097180 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017860.1 MGP_LPJ_G0015406.1 mouse_genomes_project 2 172920277 172925025 + 1110018N20Rik processed_transcript processed_transcript MGP_LPJ_T0017861.1 MGP_LPJ_G0015406.1 mouse_genomes_project 2 172920682 172925306 + 1110018N20Rik processed_transcript processed_transcript MGP_LPJ_T0017862.1 MGP_LPJ_G0015406.1 mouse_genomes_project 2 172921236 172925588 + 1110018N20Rik processed_transcript processed_transcript MGP_LPJ_T0013668.1 MGP_LPJ_G0011759.1 mouse_genomes_project 2 108637997 108638267 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007326.1 MGP_LPJ_G0006009.1 mouse_genomes_project 2 121268966 121274920 - A930104D05Rik lincRNA lincRNA MGP_LPJ_T0007327.1 MGP_LPJ_G0006009.1 mouse_genomes_project 2 121271756 121274752 - A930104D05Rik lincRNA lincRNA MGP_LPJ_T0055786.1 MGP_LPJ_G0026046.1 mouse_genomes_project 2 90962439 90963483 - MGP_LPJ_P0055786 protein_coding protein_coding MGP_LPJ_T0100610.1 MGP_LPJ_G0038873.1 mouse_genomes_project 2 124141741 124141955 + Gm22865 snoRNA snoRNA MGP_LPJ_T0013508.1 MGP_LPJ_G0011599.1 mouse_genomes_project 2 53514325 53515142 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017710.1 MGP_LPJ_G0015329.1 mouse_genomes_project 2 30339928 30358799 - Gm16534 processed_transcript processed_transcript MGP_LPJ_T0017711.1 MGP_LPJ_G0015329.1 mouse_genomes_project 2 30340723 30359546 - Gm16534 processed_transcript processed_transcript MGP_LPJ_T0003959.1 MGP_LPJ_G0003536.1 mouse_genomes_project 2 30150530 30156014 - Gm13441 antisense antisense MGP_LPJ_T0010489.1 MGP_LPJ_G0008607.1 mouse_genomes_project 2 160311406 160311515 + Mir695 miRNA miRNA MGP_LPJ_T0098524.1 MGP_LPJ_G0036799.1 mouse_genomes_project 2 4081889 4083117 - Gm10115 sense_intronic sense_intronic MGP_LPJ_T0059425.1 MGP_LPJ_G0026896.1 mouse_genomes_project 2 180328918 180344989 + MGP_LPJ_P0059425 Stx16 protein_coding protein_coding MGP_LPJ_T0059426.1 MGP_LPJ_G0026896.1 mouse_genomes_project 2 180328928 180343290 + MGP_LPJ_P0059426 Stx16 protein_coding protein_coding MGP_LPJ_T0059427.1 MGP_LPJ_G0026896.1 mouse_genomes_project 2 180328932 180346082 + MGP_LPJ_P0059427 Stx16 protein_coding protein_coding MGP_LPJ_T0059428.1 MGP_LPJ_G0026896.1 mouse_genomes_project 2 180329532 180352320 + MGP_LPJ_P0059428 Stx16 protein_coding protein_coding MGP_LPJ_T0059429.1 MGP_LPJ_G0026896.1 mouse_genomes_project 2 180329668 180352319 + MGP_LPJ_P0059429 Stx16 protein_coding protein_coding MGP_LPJ_T0059430.1 MGP_LPJ_G0026896.1 mouse_genomes_project 2 180329676 180349521 + MGP_LPJ_P0059430 Stx16 protein_coding protein_coding MGP_LPJ_T0010432.1 MGP_LPJ_G0008550.1 mouse_genomes_project 2 37510651 37510740 + Mir181b-2 miRNA miRNA MGP_LPJ_T0017684.1 MGP_LPJ_G0015313.1 mouse_genomes_project 2 15597098 15599519 - 1810059C17Rik processed_transcript processed_transcript MGP_LPJ_T0055794.1 MGP_LPJ_G0026052.1 mouse_genomes_project 2 91210999 91211905 - MGP_LPJ_P0055794 Olfr48 protein_coding protein_coding MGP_LPJ_T0057870.1 MGP_LPJ_G0026518.1 mouse_genomes_project 2 148484907 148506066 - MGP_LPJ_P0057870 Snx5 protein_coding protein_coding MGP_LPJ_T0057871.1 MGP_LPJ_G0026518.1 mouse_genomes_project 2 148484907 148505732 - MGP_LPJ_P0057871 Snx5 protein_coding protein_coding MGP_LPJ_T0057872.1 MGP_LPJ_G0026518.1 mouse_genomes_project 2 148485895 148487471 - Snx5 protein_coding processed_transcript MGP_LPJ_T0057873.1 MGP_LPJ_G0026518.1 mouse_genomes_project 2 148488173 148489850 - Snx5 protein_coding processed_transcript MGP_LPJ_T0057874.1 MGP_LPJ_G0026518.1 mouse_genomes_project 2 148489134 148489829 - Snx5 protein_coding processed_transcript MGP_LPJ_T0057875.1 MGP_LPJ_G0026518.1 mouse_genomes_project 2 148489237 148495936 - Snx5 protein_coding processed_transcript MGP_LPJ_T0057876.1 MGP_LPJ_G0026518.1 mouse_genomes_project 2 148504620 148505944 - Snx5 protein_coding processed_transcript MGP_LPJ_T0059339.1 MGP_LPJ_G0026865.1 mouse_genomes_project 2 175533495 175539175 - MGP_LPJ_P0059339 Gm11011 protein_coding protein_coding MGP_LPJ_T0013689.1 MGP_LPJ_G0011780.1 mouse_genomes_project 2 115143562 115146827 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004006.1 MGP_LPJ_G0003573.1 mouse_genomes_project 2 68250051 68251722 + Gm13596 antisense antisense MGP_LPJ_T0013690.1 MGP_LPJ_G0011781.1 mouse_genomes_project 2 116155322 116155841 + processed_pseudogene processed_pseudogene MGP_LPJ_T0055423.1 MGP_LPJ_G0025821.1 mouse_genomes_project 2 82596275 82810762 + MGP_LPJ_P0055423 Zfp804a protein_coding protein_coding MGP_LPJ_T0055424.1 MGP_LPJ_G0025821.1 mouse_genomes_project 2 82783359 82808211 + Zfp804a protein_coding processed_transcript MGP_LPJ_T0056579.1 MGP_LPJ_G0026235.1 mouse_genomes_project 2 116610668 116625785 - MGP_LPJ_P0056579 Arhgap11a protein_coding protein_coding MGP_LPJ_T0056580.1 MGP_LPJ_G0026235.1 mouse_genomes_project 2 116610956 116625993 - MGP_LPJ_P0056580 Arhgap11a protein_coding protein_coding MGP_LPJ_T0007434.1 MGP_LPJ_G0006098.1 mouse_genomes_project 2 176178877 176180482 - Gm17619 lincRNA lincRNA MGP_LPJ_T0100617.1 MGP_LPJ_G0038880.1 mouse_genomes_project 2 133984968 133985054 + Gm23187 snoRNA snoRNA MGP_LPJ_T0010444.1 MGP_LPJ_G0008562.1 mouse_genomes_project 2 75871184 75871258 + Gm24574 miRNA miRNA MGP_LPJ_T0013517.1 MGP_LPJ_G0011608.1 mouse_genomes_project 2 56644050 56647514 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004147.1 MGP_LPJ_G0003669.1 mouse_genomes_project 2 157745621 157747236 - Gm14199 antisense antisense MGP_LPJ_T0004020.1 MGP_LPJ_G0003582.1 mouse_genomes_project 2 73504946 73512846 + Gm13703 antisense antisense MGP_LPJ_T0001052.1 MGP_LPJ_G0000977.1 mouse_genomes_project 2 4072128 4082498 + TEC TEC MGP_LPJ_T0052521.1 MGP_LPJ_G0025292.1 mouse_genomes_project 2 11667001 11780403 + MGP_LPJ_P0052521 Mrc1 protein_coding protein_coding MGP_LPJ_T0052522.1 MGP_LPJ_G0025292.1 mouse_genomes_project 2 11667122 11779521 + MGP_LPJ_P0052522 Mrc1 protein_coding unknown_likely_coding MGP_LPJ_T0052523.1 MGP_LPJ_G0025292.1 mouse_genomes_project 2 11776906 11780273 + Mrc1 protein_coding retained_intron MGP_LPJ_T0054210.1 MGP_LPJ_G0025574.1 mouse_genomes_project 2 33383506 33405417 - MGP_LPJ_P0054210 Psmd5 protein_coding protein_coding MGP_LPJ_T0054211.1 MGP_LPJ_G0025574.1 mouse_genomes_project 2 33385874 33405388 - Psmd5 protein_coding retained_intron MGP_LPJ_T0054212.1 MGP_LPJ_G0025574.1 mouse_genomes_project 2 33386215 33391656 - MGP_LPJ_P0054212 Psmd5 protein_coding protein_coding MGP_LPJ_T0054213.1 MGP_LPJ_G0025574.1 mouse_genomes_project 2 33401352 33409533 - Psmd5 protein_coding processed_transcript MGP_LPJ_T0054214.1 MGP_LPJ_G0025574.1 mouse_genomes_project 2 33405562 33406665 - Psmd5 protein_coding processed_transcript MGP_LPJ_T0013406.1 MGP_LPJ_G0011497.1 mouse_genomes_project 2 15316921 15318072 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017744.1 MGP_LPJ_G0015354.1 mouse_genomes_project 2 89155216 89160385 - processed_transcript processed_transcript MGP_LPJ_T0052574.1 MGP_LPJ_G0025302.1 mouse_genomes_project 2 15568145 15580674 - MGP_LPJ_P0052574 A930004D18Rik protein_coding protein_coding MGP_LPJ_T0052575.1 MGP_LPJ_G0025302.1 mouse_genomes_project 2 15570878 15571713 - A930004D18Rik protein_coding processed_transcript MGP_LPJ_T0052576.1 MGP_LPJ_G0025302.1 mouse_genomes_project 2 15570926 15571824 - A930004D18Rik protein_coding processed_transcript MGP_LPJ_T0013814.1 MGP_LPJ_G0011905.1 mouse_genomes_project 2 168219328 168219661 + processed_pseudogene processed_pseudogene MGP_LPJ_T0057960.1 MGP_LPJ_G0026536.1 mouse_genomes_project 2 150609610 150886538 - MGP_LPJ_P0057960 Ralgapa2 protein_coding protein_coding MGP_LPJ_T0057961.1 MGP_LPJ_G0026536.1 mouse_genomes_project 2 150613701 150820192 - MGP_LPJ_P0057961 Ralgapa2 protein_coding protein_coding MGP_LPJ_T0057962.1 MGP_LPJ_G0026536.1 mouse_genomes_project 2 150614509 150631108 - Ralgapa2 protein_coding processed_transcript MGP_LPJ_T0057963.1 MGP_LPJ_G0026536.1 mouse_genomes_project 2 150617924 150886433 - MGP_LPJ_P0057963 Ralgapa2 protein_coding protein_coding MGP_LPJ_T0057964.1 MGP_LPJ_G0026536.1 mouse_genomes_project 2 150628306 150761439 - MGP_LPJ_P0057964 Ralgapa2 protein_coding nonsense_mediated_decay MGP_LPJ_T0057965.1 MGP_LPJ_G0026536.1 mouse_genomes_project 2 150686652 150886433 - MGP_LPJ_P0057965 Ralgapa2 protein_coding unknown_likely_coding MGP_LPJ_T0057966.1 MGP_LPJ_G0026536.1 mouse_genomes_project 2 150734477 150779194 - Ralgapa2 protein_coding retained_intron MGP_LPJ_T0057967.1 MGP_LPJ_G0026536.1 mouse_genomes_project 2 150777745 150785787 - Ralgapa2 protein_coding retained_intron MGP_LPJ_T0057968.1 MGP_LPJ_G0026536.1 mouse_genomes_project 2 150792988 150886445 - Ralgapa2 protein_coding retained_intron MGP_LPJ_T0057969.1 MGP_LPJ_G0026536.1 mouse_genomes_project 2 150802359 150886538 - Ralgapa2 protein_coding retained_intron MGP_LPJ_T0057970.1 MGP_LPJ_G0026536.1 mouse_genomes_project 2 150859022 150886560 - Ralgapa2 protein_coding retained_intron MGP_LPJ_T0017793.1 MGP_LPJ_G0015376.1 mouse_genomes_project 2 123359567 123360241 - Gm13997 processed_transcript processed_transcript MGP_LPJ_T0054222.1 MGP_LPJ_G0025577.1 mouse_genomes_project 2 33482980 33499445 - MGP_LPJ_P0054222 Traf1 protein_coding protein_coding MGP_LPJ_T0054223.1 MGP_LPJ_G0025577.1 mouse_genomes_project 2 33484544 33502864 - MGP_LPJ_P0054223 Traf1 protein_coding protein_coding MGP_LPJ_T0054224.1 MGP_LPJ_G0025577.1 mouse_genomes_project 2 33484546 33503051 - MGP_LPJ_P0054224 Traf1 protein_coding protein_coding MGP_LPJ_T0054225.1 MGP_LPJ_G0025577.1 mouse_genomes_project 2 33488827 33502861 - Traf1 protein_coding processed_transcript MGP_LPJ_T0054226.1 MGP_LPJ_G0025577.1 mouse_genomes_project 2 33497354 33499418 - MGP_LPJ_P0054226 Traf1 protein_coding protein_coding MGP_LPJ_T0054227.1 MGP_LPJ_G0025577.1 mouse_genomes_project 2 33497463 33499443 - Traf1 protein_coding retained_intron MGP_LPJ_T0054228.1 MGP_LPJ_G0025577.1 mouse_genomes_project 2 33497475 33500187 - Traf1 protein_coding processed_transcript MGP_LPJ_T0054229.1 MGP_LPJ_G0025577.1 mouse_genomes_project 2 33498828 33502876 - Traf1 protein_coding retained_intron MGP_LPJ_T0054230.1 MGP_LPJ_G0025577.1 mouse_genomes_project 2 33499433 33502841 - Traf1 protein_coding processed_transcript MGP_LPJ_T0003914.1 MGP_LPJ_G0003502.1 mouse_genomes_project 2 12145387 12176370 - Gm10848 antisense antisense MGP_LPJ_T0052313.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3652198 4538373 - MGP_LPJ_P0052313 Celf2 protein_coding protein_coding MGP_LPJ_T0052314.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3652209 3846724 - MGP_LPJ_P0052314 Celf2 protein_coding protein_coding MGP_LPJ_T0052315.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3652209 4011765 - MGP_LPJ_P0052315 Celf2 protein_coding protein_coding MGP_LPJ_T0052316.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3652209 4011765 - MGP_LPJ_P0052316 Celf2 protein_coding protein_coding MGP_LPJ_T0052317.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3656250 4011765 - MGP_LPJ_P0052317 Celf2 protein_coding protein_coding MGP_LPJ_T0052318.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3657802 4223753 - MGP_LPJ_P0052318 Celf2 protein_coding protein_coding MGP_LPJ_T0052319.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3659180 4011716 - MGP_LPJ_P0052319 Celf2 protein_coding protein_coding MGP_LPJ_T0052320.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3660161 4223693 - MGP_LPJ_P0052320 Celf2 protein_coding protein_coding MGP_LPJ_T0052321.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3660161 3846724 - MGP_LPJ_P0052321 Celf2 protein_coding protein_coding MGP_LPJ_T0052322.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3660955 3847037 - MGP_LPJ_P0052322 Celf2 protein_coding protein_coding MGP_LPJ_T0052323.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3661560 3846722 - MGP_LPJ_P0052323 Celf2 protein_coding protein_coding MGP_LPJ_T0052324.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3661560 3846722 - MGP_LPJ_P0052324 Celf2 protein_coding protein_coding MGP_LPJ_T0052325.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3661654 4011715 - MGP_LPJ_P0052325 Celf2 protein_coding protein_coding MGP_LPJ_T0052326.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3663507 3999366 - MGP_LPJ_P0052326 Celf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0052327.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3663520 3710104 - Celf2 protein_coding processed_transcript MGP_LPJ_T0052328.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3670537 4538266 - MGP_LPJ_P0052328 Celf2 protein_coding protein_coding MGP_LPJ_T0052329.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3702920 3846724 - Celf2 protein_coding retained_intron MGP_LPJ_T0052330.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3721396 3733504 - Celf2 protein_coding processed_transcript MGP_LPJ_T0052331.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3724990 4011397 - Celf2 protein_coding processed_transcript MGP_LPJ_T0052332.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3733052 4538571 - MGP_LPJ_P0052332 Celf2 protein_coding protein_coding MGP_LPJ_T0052333.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3737562 4011661 - Celf2 protein_coding retained_intron MGP_LPJ_T0052334.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3740851 3847325 - Celf2 protein_coding retained_intron MGP_LPJ_T0052335.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3742027 3998741 - MGP_LPJ_P0052335 Celf2 protein_coding protein_coding MGP_LPJ_T0052336.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3783461 4011661 - Celf2 protein_coding retained_intron MGP_LPJ_T0052337.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3787171 4223658 - MGP_LPJ_P0052337 Celf2 protein_coding protein_coding MGP_LPJ_T0052338.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 3846564 3847318 - MGP_LPJ_P0052338 Celf2 protein_coding protein_coding MGP_LPJ_T0052339.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 4219574 4223764 - Celf2 protein_coding processed_transcript MGP_LPJ_T0052340.1 MGP_LPJ_G0025262.1 mouse_genomes_project 2 4536448 4630306 - Celf2 protein_coding processed_transcript MGP_LPJ_T0007176.1 MGP_LPJ_G0005888.1 mouse_genomes_project 2 26064837 26066320 - Gm13371 lincRNA lincRNA MGP_LPJ_T0059416.1 MGP_LPJ_G0026892.1 mouse_genomes_project 2 179787218 179796904 - MGP_LPJ_P0059416 Ankrd60 protein_coding protein_coding MGP_LPJ_T0059417.1 MGP_LPJ_G0026892.1 mouse_genomes_project 2 179787256 179796737 - MGP_LPJ_P0059417 Ankrd60 protein_coding protein_coding MGP_LPJ_T0059418.1 MGP_LPJ_G0026892.1 mouse_genomes_project 2 179790930 179796812 - Ankrd60 protein_coding processed_transcript MGP_LPJ_T0055902.1 MGP_LPJ_G0026080.1 mouse_genomes_project 2 92594866 92630075 + MGP_LPJ_P0055902 Spi1 protein_coding protein_coding MGP_LPJ_T0055903.1 MGP_LPJ_G0026080.1 mouse_genomes_project 2 92594884 92602793 + Spi1 protein_coding processed_transcript MGP_LPJ_T0055904.1 MGP_LPJ_G0026080.1 mouse_genomes_project 2 92608576 92631459 + MGP_LPJ_P0055904 Spi1 protein_coding protein_coding MGP_LPJ_T0055905.1 MGP_LPJ_G0026080.1 mouse_genomes_project 2 92609260 92629024 + MGP_LPJ_P0055905 Spi1 protein_coding protein_coding MGP_LPJ_T0010503.1 MGP_LPJ_G0008621.1 mouse_genomes_project 2 174976917 174977038 + Gm26469 miRNA miRNA MGP_LPJ_T0055695.1 MGP_LPJ_G0025968.1 mouse_genomes_project 2 88973706 88974651 + MGP_LPJ_P0055695 Olfr1148 protein_coding protein_coding MGP_LPJ_T0058306.1 MGP_LPJ_G0026642.1 mouse_genomes_project 2 158836126 158843933 + MGP_LPJ_P0058306 Bpifa2 protein_coding protein_coding MGP_LPJ_T0058307.1 MGP_LPJ_G0026642.1 mouse_genomes_project 2 158836137 158842298 + MGP_LPJ_P0058307 Bpifa2 protein_coding protein_coding MGP_LPJ_T0058308.1 MGP_LPJ_G0026642.1 mouse_genomes_project 2 158841567 158843464 + Bpifa2 protein_coding retained_intron MGP_LPJ_T0058309.1 MGP_LPJ_G0026642.1 mouse_genomes_project 2 158842449 158843930 + Bpifa2 protein_coding retained_intron MGP_LPJ_T0013381.1 MGP_LPJ_G0011472.1 mouse_genomes_project 2 2694435 2694967 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013554.1 MGP_LPJ_G0011645.1 mouse_genomes_project 2 70772553 70773451 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013654.1 MGP_LPJ_G0011745.1 mouse_genomes_project 2 105340089 105340516 - processed_pseudogene processed_pseudogene MGP_LPJ_T0056557.1 MGP_LPJ_G0026230.1 mouse_genomes_project 2 115378546 115399906 - Ryr3 protein_coding processed_transcript MGP_LPJ_T0056558.1 MGP_LPJ_G0026230.1 mouse_genomes_project 2 115378555 115979281 - MGP_LPJ_P0056558 Ryr3 protein_coding unknown_likely_coding MGP_LPJ_T0056559.1 MGP_LPJ_G0026230.1 mouse_genomes_project 2 115378571 115782948 - MGP_LPJ_P0056559 Ryr3 protein_coding protein_coding MGP_LPJ_T0056560.1 MGP_LPJ_G0026230.1 mouse_genomes_project 2 115378571 115979342 - MGP_LPJ_P0056560 Ryr3 protein_coding protein_coding MGP_LPJ_T0056561.1 MGP_LPJ_G0026230.1 mouse_genomes_project 2 115379237 115979359 - Ryr3 protein_coding processed_transcript MGP_LPJ_T0056562.1 MGP_LPJ_G0026230.1 mouse_genomes_project 2 115383768 115387703 - Ryr3 protein_coding processed_transcript MGP_LPJ_T0056563.1 MGP_LPJ_G0026230.1 mouse_genomes_project 2 115609065 115658204 - Ryr3 protein_coding retained_intron MGP_LPJ_T0056564.1 MGP_LPJ_G0026230.1 mouse_genomes_project 2 115714477 115979353 - Ryr3 protein_coding retained_intron MGP_LPJ_T0056565.1 MGP_LPJ_G0026230.1 mouse_genomes_project 2 115746689 115979387 - Ryr3 protein_coding retained_intron MGP_LPJ_T0013556.1 MGP_LPJ_G0011647.1 mouse_genomes_project 2 71806461 71806991 - processed_pseudogene processed_pseudogene MGP_LPJ_T0059409.1 MGP_LPJ_G0026889.1 mouse_genomes_project 2 179397891 179411222 - MGP_LPJ_P0059409 Zbp1 protein_coding protein_coding MGP_LPJ_T0059410.1 MGP_LPJ_G0026889.1 mouse_genomes_project 2 179397894 179411196 - Zbp1 protein_coding retained_intron MGP_LPJ_T0059411.1 MGP_LPJ_G0026889.1 mouse_genomes_project 2 179404690 179411209 - MGP_LPJ_P0059411 Zbp1 protein_coding protein_coding MGP_LPJ_T0001131.1 MGP_LPJ_G0001055.1 mouse_genomes_project 2 140639443 140639709 + TEC TEC MGP_LPJ_T0054161.1 MGP_LPJ_G0025569.1 mouse_genomes_project 2 32899598 32997104 + MGP_LPJ_P0054161 Mapkap1 protein_coding protein_coding MGP_LPJ_T0054162.1 MGP_LPJ_G0025569.1 mouse_genomes_project 2 32899696 32928531 + MGP_LPJ_P0054162 Mapkap1 protein_coding protein_coding MGP_LPJ_T0054163.1 MGP_LPJ_G0025569.1 mouse_genomes_project 2 32899699 32976229 + Mapkap1 protein_coding processed_transcript MGP_LPJ_T0054164.1 MGP_LPJ_G0025569.1 mouse_genomes_project 2 32899703 33127312 + MGP_LPJ_P0054164 Mapkap1 protein_coding protein_coding MGP_LPJ_T0054165.1 MGP_LPJ_G0025569.1 mouse_genomes_project 2 32899705 33127328 + MGP_LPJ_P0054165 Mapkap1 protein_coding protein_coding MGP_LPJ_T0054166.1 MGP_LPJ_G0025569.1 mouse_genomes_project 2 32934901 33035367 + Mapkap1 protein_coding processed_transcript MGP_LPJ_T0054167.1 MGP_LPJ_G0025569.1 mouse_genomes_project 2 32940700 32997261 + MGP_LPJ_P0054167 Mapkap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0054168.1 MGP_LPJ_G0025569.1 mouse_genomes_project 2 33123345 33127683 + Mapkap1 protein_coding processed_transcript MGP_LPJ_T0055690.1 MGP_LPJ_G0025964.1 mouse_genomes_project 2 88872599 88873535 - MGP_LPJ_P0055690 Olfr1141 protein_coding protein_coding MGP_LPJ_T0057054.1 MGP_LPJ_G0026324.1 mouse_genomes_project 2 124504392 124506718 + MGP_LPJ_P0057054 Ckmt1 protein_coding protein_coding MGP_LPJ_T0057055.1 MGP_LPJ_G0026324.1 mouse_genomes_project 2 124504454 124510391 + MGP_LPJ_P0057055 Ckmt1 protein_coding protein_coding MGP_LPJ_T0057056.1 MGP_LPJ_G0026324.1 mouse_genomes_project 2 124504518 124506455 + MGP_LPJ_P0057056 Ckmt1 protein_coding protein_coding MGP_LPJ_T0057057.1 MGP_LPJ_G0026324.1 mouse_genomes_project 2 124504585 124507645 + MGP_LPJ_P0057057 Ckmt1 protein_coding protein_coding MGP_LPJ_T0057058.1 MGP_LPJ_G0026324.1 mouse_genomes_project 2 124505290 124510391 + MGP_LPJ_P0057058 Ckmt1 protein_coding protein_coding MGP_LPJ_T0057059.1 MGP_LPJ_G0026324.1 mouse_genomes_project 2 124505336 124507642 + MGP_LPJ_P0057059 Ckmt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0057060.1 MGP_LPJ_G0026324.1 mouse_genomes_project 2 124505339 124507039 + Ckmt1 protein_coding retained_intron MGP_LPJ_T0057061.1 MGP_LPJ_G0026324.1 mouse_genomes_project 2 124505346 124507284 + MGP_LPJ_P0057061 Ckmt1 protein_coding protein_coding MGP_LPJ_T0057062.1 MGP_LPJ_G0026324.1 mouse_genomes_project 2 124505524 124506697 + MGP_LPJ_P0057062 Ckmt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0057063.1 MGP_LPJ_G0026324.1 mouse_genomes_project 2 124509575 124510390 + Ckmt1 protein_coding retained_intron MGP_LPJ_T0017857.1 MGP_LPJ_G0015403.1 mouse_genomes_project 2 166853710 166854033 - Gm29229 processed_transcript processed_transcript MGP_LPJ_T0010415.1 MGP_LPJ_G0008533.1 mouse_genomes_project 2 28498613 28498709 + miRNA miRNA MGP_LPJ_T0058890.1 MGP_LPJ_G0026756.1 mouse_genomes_project 2 168883431 168899366 - MGP_LPJ_P0058890 Oser1 protein_coding protein_coding MGP_LPJ_T0058891.1 MGP_LPJ_G0026756.1 mouse_genomes_project 2 168883462 168905509 - MGP_LPJ_P0058891 Oser1 protein_coding protein_coding MGP_LPJ_T0058892.1 MGP_LPJ_G0026756.1 mouse_genomes_project 2 168884161 168898982 - Oser1 protein_coding processed_transcript MGP_LPJ_T0058893.1 MGP_LPJ_G0026756.1 mouse_genomes_project 2 168884195 168891535 - Oser1 protein_coding processed_transcript MGP_LPJ_T0058894.1 MGP_LPJ_G0026756.1 mouse_genomes_project 2 168884490 168905509 - Oser1 protein_coding processed_transcript MGP_LPJ_T0058895.1 MGP_LPJ_G0026756.1 mouse_genomes_project 2 168884679 168896962 - MGP_LPJ_P0058895 Oser1 protein_coding protein_coding MGP_LPJ_T0058896.1 MGP_LPJ_G0026756.1 mouse_genomes_project 2 168903688 168905362 - Oser1 protein_coding processed_transcript MGP_LPJ_T0055646.1 MGP_LPJ_G0025929.1 mouse_genomes_project 2 87992765 87993740 + MGP_LPJ_P0055646 Olfr1102 protein_coding protein_coding MGP_LPJ_T0058145.1 MGP_LPJ_G0026591.1 mouse_genomes_project 2 157013218 157019880 - Rbck1 protein_coding retained_intron MGP_LPJ_T0058146.1 MGP_LPJ_G0026591.1 mouse_genomes_project 2 157013218 157029304 - MGP_LPJ_P0058146 Rbck1 protein_coding protein_coding MGP_LPJ_T0058147.1 MGP_LPJ_G0026591.1 mouse_genomes_project 2 157013218 157029545 - MGP_LPJ_P0058147 Rbck1 protein_coding protein_coding MGP_LPJ_T0058148.1 MGP_LPJ_G0026591.1 mouse_genomes_project 2 157015193 157020381 - Rbck1 protein_coding retained_intron MGP_LPJ_T0058149.1 MGP_LPJ_G0026591.1 mouse_genomes_project 2 157015661 157021247 - MGP_LPJ_P0058149 Rbck1 protein_coding protein_coding MGP_LPJ_T0058150.1 MGP_LPJ_G0026591.1 mouse_genomes_project 2 157019820 157021499 - Rbck1 protein_coding retained_intron MGP_LPJ_T0058151.1 MGP_LPJ_G0026591.1 mouse_genomes_project 2 157021422 157024645 - Rbck1 protein_coding processed_transcript MGP_LPJ_T0058152.1 MGP_LPJ_G0026591.1 mouse_genomes_project 2 157023291 157029276 - Rbck1 protein_coding processed_transcript MGP_LPJ_T0007317.1 MGP_LPJ_G0006002.1 mouse_genomes_project 2 119835776 119848866 + D330050G23Rik lincRNA lincRNA MGP_LPJ_T0007318.1 MGP_LPJ_G0006002.1 mouse_genomes_project 2 119835799 119848701 + D330050G23Rik lincRNA lincRNA MGP_LPJ_T0007319.1 MGP_LPJ_G0006002.1 mouse_genomes_project 2 119835818 119839731 + D330050G23Rik lincRNA lincRNA MGP_LPJ_T0007299.1 MGP_LPJ_G0005987.1 mouse_genomes_project 2 108389845 108392002 - Gm29053 lincRNA lincRNA MGP_LPJ_T0055435.1 MGP_LPJ_G0025824.1 mouse_genomes_project 2 84219797 84253913 + Itgav protein_coding retained_intron MGP_LPJ_T0055436.1 MGP_LPJ_G0025824.1 mouse_genomes_project 2 84219797 84319072 + MGP_LPJ_P0055436 Itgav protein_coding protein_coding MGP_LPJ_T0055437.1 MGP_LPJ_G0025824.1 mouse_genomes_project 2 84219852 84244115 + MGP_LPJ_P0055437 Itgav protein_coding protein_coding MGP_LPJ_T0055438.1 MGP_LPJ_G0025824.1 mouse_genomes_project 2 84219857 84236620 + Itgav protein_coding processed_transcript MGP_LPJ_T0055439.1 MGP_LPJ_G0025824.1 mouse_genomes_project 2 84219866 84244543 + Itgav protein_coding retained_intron MGP_LPJ_T0055440.1 MGP_LPJ_G0025824.1 mouse_genomes_project 2 84219927 84221188 + Itgav protein_coding processed_transcript MGP_LPJ_T0055441.1 MGP_LPJ_G0025824.1 mouse_genomes_project 2 84219955 84319072 + MGP_LPJ_P0055441 Itgav protein_coding protein_coding MGP_LPJ_T0055442.1 MGP_LPJ_G0025824.1 mouse_genomes_project 2 84314006 84316142 + MGP_LPJ_P0055442 Itgav protein_coding protein_coding MGP_LPJ_T0055443.1 MGP_LPJ_G0025824.1 mouse_genomes_project 2 84315077 84319072 + MGP_LPJ_P0055443 Itgav protein_coding protein_coding MGP_LPJ_T0059482.1 MGP_LPJ_G0026908.1 mouse_genomes_project 2 184726199 184823196 - MGP_LPJ_P0059482 Sycp2 protein_coding protein_coding MGP_LPJ_T0059483.1 MGP_LPJ_G0026908.1 mouse_genomes_project 2 184727025 184761871 - Sycp2 protein_coding processed_transcript MGP_LPJ_T0059484.1 MGP_LPJ_G0026908.1 mouse_genomes_project 2 184756330 184762211 - Sycp2 protein_coding retained_intron MGP_LPJ_T0059485.1 MGP_LPJ_G0026908.1 mouse_genomes_project 2 184785220 184822933 - MGP_LPJ_P0059485 Sycp2 protein_coding protein_coding MGP_LPJ_T0004042.1 MGP_LPJ_G0003597.1 mouse_genomes_project 2 85695051 85696763 + Gm13716 antisense antisense MGP_LPJ_T0013443.1 MGP_LPJ_G0011534.1 mouse_genomes_project 2 29797346 29798141 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004004.1 MGP_LPJ_G0003571.1 mouse_genomes_project 2 67027797 67119978 - Gm13599 antisense antisense MGP_LPJ_T0058980.1 MGP_LPJ_G0026788.1 mouse_genomes_project 2 169988865 170020324 + MGP_LPJ_P0058980 Gm20458 protein_coding nonsense_mediated_decay MGP_LPJ_T0017762.1 MGP_LPJ_G0015362.1 mouse_genomes_project 2 95692689 95696231 + Alkbh3os1 processed_transcript processed_transcript MGP_LPJ_T0004100.1 MGP_LPJ_G0003635.1 mouse_genomes_project 2 132870450 132891938 + Gm14024 antisense antisense MGP_LPJ_T0053100.1 MGP_LPJ_G0025396.1 mouse_genomes_project 2 23530371 23533727 + MGP_LPJ_P0053100 Lcn10 protein_coding protein_coding MGP_LPJ_T0013472.1 MGP_LPJ_G0011563.1 mouse_genomes_project 2 38248079 38248671 - processed_pseudogene processed_pseudogene MGP_LPJ_T0057709.1 MGP_LPJ_G0026479.1 mouse_genomes_project 2 136133184 136185191 - MGP_LPJ_P0057709 Prokr2 protein_coding protein_coding MGP_LPJ_T0057710.1 MGP_LPJ_G0026479.1 mouse_genomes_project 2 136170104 136185189 - MGP_LPJ_P0057710 Prokr2 protein_coding protein_coding MGP_LPJ_T0057711.1 MGP_LPJ_G0026479.1 mouse_genomes_project 2 136170104 136185164 - MGP_LPJ_P0057711 Prokr2 protein_coding protein_coding MGP_LPJ_T0057712.1 MGP_LPJ_G0026479.1 mouse_genomes_project 2 136170946 136185211 - MGP_LPJ_P0057712 Prokr2 protein_coding protein_coding MGP_LPJ_T0057713.1 MGP_LPJ_G0026479.1 mouse_genomes_project 2 136181333 136185185 - MGP_LPJ_P0057713 Prokr2 protein_coding protein_coding MGP_LPJ_T0102070.1 MGP_LPJ_G0040107.1 mouse_genomes_project 2 143201573 143201802 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0059574.1 MGP_LPJ_G0026931.1 mouse_genomes_project 2 187164362 187185182 - MGP_LPJ_P0059574 Tcfl5 protein_coding protein_coding MGP_LPJ_T0059575.1 MGP_LPJ_G0026931.1 mouse_genomes_project 2 187164998 187184823 - MGP_LPJ_P0059575 Tcfl5 protein_coding unknown_likely_coding MGP_LPJ_T0059576.1 MGP_LPJ_G0026931.1 mouse_genomes_project 2 187177857 187185182 - MGP_LPJ_P0059576 Tcfl5 protein_coding nonsense_mediated_decay MGP_LPJ_T0059577.1 MGP_LPJ_G0026931.1 mouse_genomes_project 2 187180069 187184953 - Tcfl5 protein_coding retained_intron MGP_LPJ_T0001118.1 MGP_LPJ_G0001043.1 mouse_genomes_project 2 75553517 75554112 - TEC TEC MGP_LPJ_T0017775.1 MGP_LPJ_G0015368.1 mouse_genomes_project 2 112441746 112452684 - Platr8 processed_transcript processed_transcript MGP_LPJ_T0054627.1 MGP_LPJ_G0025665.1 mouse_genomes_project 2 51607616 51637721 - MGP_LPJ_P0054627 Arl5a protein_coding protein_coding MGP_LPJ_T0055704.1 MGP_LPJ_G0025977.1 mouse_genomes_project 2 89131166 89132313 - MGP_LPJ_P0055704 protein_coding protein_coding MGP_LPJ_T0059435.1 MGP_LPJ_G0026898.1 mouse_genomes_project 2 180540746 180597928 + MGP_LPJ_P0059435 Gnas protein_coding protein_coding MGP_LPJ_T0059436.1 MGP_LPJ_G0026898.1 mouse_genomes_project 2 180540746 180606553 + MGP_LPJ_P0059436 Gnas protein_coding protein_coding MGP_LPJ_T0059437.1 MGP_LPJ_G0026898.1 mouse_genomes_project 2 180540746 180553299 + MGP_LPJ_P0059437 Gnas protein_coding protein_coding MGP_LPJ_T0059438.1 MGP_LPJ_G0026898.1 mouse_genomes_project 2 180541784 180597928 + MGP_LPJ_P0059438 Gnas protein_coding protein_coding MGP_LPJ_T0059439.1 MGP_LPJ_G0026898.1 mouse_genomes_project 2 180554263 180606311 + Gnas protein_coding processed_transcript MGP_LPJ_T0059440.1 MGP_LPJ_G0026898.1 mouse_genomes_project 2 180554263 180558423 + MGP_LPJ_P0059440 Gnas protein_coding protein_coding MGP_LPJ_T0059441.1 MGP_LPJ_G0026898.1 mouse_genomes_project 2 180554263 180606553 + MGP_LPJ_P0059441 Gnas protein_coding protein_coding MGP_LPJ_T0059442.1 MGP_LPJ_G0026898.1 mouse_genomes_project 2 180554263 180606311 + MGP_LPJ_P0059442 Gnas protein_coding protein_coding MGP_LPJ_T0059443.1 MGP_LPJ_G0026898.1 mouse_genomes_project 2 180554263 180606521 + MGP_LPJ_P0059443 Gnas protein_coding protein_coding MGP_LPJ_T0059444.1 MGP_LPJ_G0026898.1 mouse_genomes_project 2 180584023 180605049 + Gnas protein_coding processed_transcript MGP_LPJ_T0059445.1 MGP_LPJ_G0026898.1 mouse_genomes_project 2 180584152 180606311 + Gnas protein_coding processed_transcript MGP_LPJ_T0059446.1 MGP_LPJ_G0026898.1 mouse_genomes_project 2 180584183 180585402 + Gnas protein_coding processed_transcript MGP_LPJ_T0059447.1 MGP_LPJ_G0026898.1 mouse_genomes_project 2 180584210 180597928 + Gnas protein_coding processed_transcript MGP_LPJ_T0059448.1 MGP_LPJ_G0026898.1 mouse_genomes_project 2 180584476 180605087 + Gnas protein_coding processed_transcript MGP_LPJ_T0059449.1 MGP_LPJ_G0026898.1 mouse_genomes_project 2 180586462 180606553 + MGP_LPJ_P0059449 Gnas protein_coding protein_coding MGP_LPJ_T0059450.1 MGP_LPJ_G0026898.1 mouse_genomes_project 2 180586553 180606553 + MGP_LPJ_P0059450 Gnas protein_coding protein_coding MGP_LPJ_T0059451.1 MGP_LPJ_G0026898.1 mouse_genomes_project 2 180586743 180597928 + MGP_LPJ_P0059451 Gnas protein_coding protein_coding MGP_LPJ_T0059452.1 MGP_LPJ_G0026898.1 mouse_genomes_project 2 180586752 180606197 + MGP_LPJ_P0059452 Gnas protein_coding protein_coding MGP_LPJ_T0059454.1 MGP_LPJ_G0026898.1 mouse_genomes_project 2 180601509 180605217 + Gnas protein_coding retained_intron MGP_LPJ_T0059455.1 MGP_LPJ_G0026898.1 mouse_genomes_project 2 180604457 180605536 + Gnas protein_coding retained_intron MGP_LPJ_T0055799.1 MGP_LPJ_G0026055.1 mouse_genomes_project 2 91334675 91338043 + MGP_LPJ_P0055799 Olfr1260 protein_coding protein_coding MGP_LPJ_T0055800.1 MGP_LPJ_G0026055.1 mouse_genomes_project 2 91334682 91337523 + Olfr1260 protein_coding processed_transcript MGP_LPJ_T0055801.1 MGP_LPJ_G0026055.1 mouse_genomes_project 2 91334685 91337473 + MGP_LPJ_P0055801 Olfr1260 protein_coding protein_coding MGP_LPJ_T0055802.1 MGP_LPJ_G0026055.1 mouse_genomes_project 2 91334691 91337530 + Olfr1260 protein_coding processed_transcript MGP_LPJ_T0055803.1 MGP_LPJ_G0026055.1 mouse_genomes_project 2 91337110 91338043 + MGP_LPJ_P0055803 Olfr1260 protein_coding protein_coding MGP_LPJ_T0057356.1 MGP_LPJ_G0026395.1 mouse_genomes_project 2 130857303 130876315 + MGP_LPJ_P0057356 Astl protein_coding protein_coding MGP_LPJ_T0057357.1 MGP_LPJ_G0026395.1 mouse_genomes_project 2 130860307 130876314 + MGP_LPJ_P0057357 Astl protein_coding protein_coding MGP_LPJ_T0057358.1 MGP_LPJ_G0026395.1 mouse_genomes_project 2 130860321 130876313 + MGP_LPJ_P0057358 Astl protein_coding protein_coding MGP_LPJ_T0057359.1 MGP_LPJ_G0026395.1 mouse_genomes_project 2 130860595 130868840 + MGP_LPJ_P0057359 Astl protein_coding protein_coding MGP_LPJ_T0058714.1 MGP_LPJ_G0026718.1 mouse_genomes_project 2 162660820 162670732 - MGP_LPJ_P0058714 Blcap protein_coding protein_coding MGP_LPJ_T0058715.1 MGP_LPJ_G0026718.1 mouse_genomes_project 2 162660820 162670708 - MGP_LPJ_P0058715 Blcap protein_coding protein_coding MGP_LPJ_T0058716.1 MGP_LPJ_G0026718.1 mouse_genomes_project 2 162662560 162677643 - MGP_LPJ_P0058716 Blcap protein_coding protein_coding MGP_LPJ_T0058717.1 MGP_LPJ_G0026718.1 mouse_genomes_project 2 162662646 162664466 - Blcap protein_coding processed_transcript MGP_LPJ_T0058728.1 MGP_LPJ_G0026718.1 mouse_genomes_project 2 162669961 162670702 - Blcap protein_coding processed_transcript MGP_LPJ_T0058729.1 MGP_LPJ_G0026718.1 mouse_genomes_project 2 162671245 162677643 - Blcap protein_coding processed_transcript MGP_LPJ_T0102020.1 MGP_LPJ_G0040057.1 mouse_genomes_project 2 70112072 70114246 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0058166.1 MGP_LPJ_G0026600.1 mouse_genomes_project 2 157215921 157219698 - MGP_LPJ_P0058166 Defb26 protein_coding protein_coding MGP_LPJ_T0099358.1 MGP_LPJ_G0037621.1 mouse_genomes_project 2 137479684 137479791 - Gm25258 snRNA snRNA MGP_LPJ_T0017692.1 MGP_LPJ_G0015318.1 mouse_genomes_project 2 24247385 24266794 + Gm13562 processed_transcript processed_transcript MGP_LPJ_T0017693.1 MGP_LPJ_G0015318.1 mouse_genomes_project 2 24260309 24264576 + Gm13562 processed_transcript processed_transcript MGP_LPJ_T0057945.1 MGP_LPJ_G0026534.1 mouse_genomes_project 2 150295088 150325947 + MGP_LPJ_P0057945 protein_coding protein_coding MGP_LPJ_T0057946.1 MGP_LPJ_G0026534.1 mouse_genomes_project 2 150295088 150405902 + MGP_LPJ_P0057946 protein_coding protein_coding MGP_LPJ_T0057947.1 MGP_LPJ_G0026534.1 mouse_genomes_project 2 150295109 150325174 + MGP_LPJ_P0057947 protein_coding protein_coding MGP_LPJ_T0057948.1 MGP_LPJ_G0026534.1 mouse_genomes_project 2 150295109 150327944 + MGP_LPJ_P0057948 protein_coding protein_coding MGP_LPJ_T0057949.1 MGP_LPJ_G0026534.1 mouse_genomes_project 2 150295112 150325029 + MGP_LPJ_P0057949 protein_coding protein_coding MGP_LPJ_T0057950.1 MGP_LPJ_G0026534.1 mouse_genomes_project 2 150295118 150582342 + MGP_LPJ_P0057950 protein_coding protein_coding MGP_LPJ_T0057951.1 MGP_LPJ_G0026534.1 mouse_genomes_project 2 150295120 150315535 + MGP_LPJ_P0057951 protein_coding protein_coding MGP_LPJ_T0057952.1 MGP_LPJ_G0026534.1 mouse_genomes_project 2 150404322 150458514 + protein_coding processed_transcript MGP_LPJ_T0057953.1 MGP_LPJ_G0026534.1 mouse_genomes_project 2 150408154 150498102 + protein_coding retained_intron MGP_LPJ_T0057954.1 MGP_LPJ_G0026534.1 mouse_genomes_project 2 150408286 150498233 + MGP_LPJ_P0057954 protein_coding protein_coding MGP_LPJ_T0057955.1 MGP_LPJ_G0026534.1 mouse_genomes_project 2 150410079 150582338 + protein_coding processed_transcript MGP_LPJ_T0057956.1 MGP_LPJ_G0026534.1 mouse_genomes_project 2 150521790 150582263 + protein_coding processed_transcript MGP_LPJ_T0057957.1 MGP_LPJ_G0026534.1 mouse_genomes_project 2 150581567 150582338 + protein_coding processed_transcript MGP_LPJ_T0057958.1 MGP_LPJ_G0026534.1 mouse_genomes_project 2 150581915 150582098 + MGP_LPJ_P0057958 protein_coding protein_coding MGP_LPJ_T0054928.1 MGP_LPJ_G0025719.1 mouse_genomes_project 2 67156632 67156998 - MGP_LPJ_P0054928 Gm26727 protein_coding protein_coding MGP_LPJ_T0054297.1 MGP_LPJ_G0025588.1 mouse_genomes_project 2 34335580 34582809 - MGP_LPJ_P0054297 Ttll11 protein_coding protein_coding MGP_LPJ_T0054298.1 MGP_LPJ_G0025588.1 mouse_genomes_project 2 34335580 34582809 - MGP_LPJ_P0054298 Ttll11 protein_coding protein_coding MGP_LPJ_T0054299.1 MGP_LPJ_G0025588.1 mouse_genomes_project 2 34336001 34582951 - MGP_LPJ_P0054299 Ttll11 protein_coding nonsense_mediated_decay MGP_LPJ_T0054300.1 MGP_LPJ_G0025588.1 mouse_genomes_project 2 34336286 34540911 - MGP_LPJ_P0054300 Ttll11 protein_coding protein_coding MGP_LPJ_T0054301.1 MGP_LPJ_G0025588.1 mouse_genomes_project 2 34372431 34474281 - Ttll11 protein_coding processed_transcript MGP_LPJ_T0054302.1 MGP_LPJ_G0025588.1 mouse_genomes_project 2 34483171 34545052 - Ttll11 protein_coding processed_transcript MGP_LPJ_T0054303.1 MGP_LPJ_G0025588.1 mouse_genomes_project 2 34496234 34583098 - Ttll11 protein_coding processed_transcript MGP_LPJ_T0054304.1 MGP_LPJ_G0025588.1 mouse_genomes_project 2 34496529 34550696 - MGP_LPJ_P0054304 Ttll11 protein_coding protein_coding MGP_LPJ_T0054305.1 MGP_LPJ_G0025588.1 mouse_genomes_project 2 34496549 34553218 - MGP_LPJ_P0054305 Ttll11 protein_coding protein_coding MGP_LPJ_T0017719.1 MGP_LPJ_G0015334.1 mouse_genomes_project 2 49434078 49508766 + Gm13483 processed_transcript processed_transcript MGP_LPJ_T0017720.1 MGP_LPJ_G0015334.1 mouse_genomes_project 2 49434132 49577730 + Gm13483 processed_transcript processed_transcript MGP_LPJ_T0053214.1 MGP_LPJ_G0025419.1 mouse_genomes_project 2 24290813 24293771 - MGP_LPJ_P0053214 Inpp5e protein_coding protein_coding MGP_LPJ_T0053215.1 MGP_LPJ_G0025419.1 mouse_genomes_project 2 24291351 24303397 - Inpp5e protein_coding processed_transcript MGP_LPJ_T0053216.1 MGP_LPJ_G0025419.1 mouse_genomes_project 2 24291594 24303416 - Inpp5e protein_coding processed_transcript MGP_LPJ_T0053217.1 MGP_LPJ_G0025419.1 mouse_genomes_project 2 24292136 24302800 - MGP_LPJ_P0053217 Inpp5e protein_coding protein_coding MGP_LPJ_T0053218.1 MGP_LPJ_G0025419.1 mouse_genomes_project 2 24293559 24294776 - Inpp5e protein_coding processed_transcript MGP_LPJ_T0053219.1 MGP_LPJ_G0025419.1 mouse_genomes_project 2 24293712 24296506 - MGP_LPJ_P0053219 Inpp5e protein_coding protein_coding MGP_LPJ_T0013702.1 MGP_LPJ_G0011793.1 mouse_genomes_project 2 124552094 124552327 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013784.1 MGP_LPJ_G0011875.1 mouse_genomes_project 2 157480645 157481246 + processed_pseudogene processed_pseudogene MGP_LPJ_T0056523.1 MGP_LPJ_G0026210.1 mouse_genomes_project 2 114533170 114534109 - MGP_LPJ_P0056523 Olfr1305 protein_coding protein_coding MGP_LPJ_T0013541.1 MGP_LPJ_G0011632.1 mouse_genomes_project 2 64905050 64906242 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100590.1 MGP_LPJ_G0038853.1 mouse_genomes_project 2 60978350 60978479 + Gm22338 snoRNA snoRNA MGP_LPJ_T0007171.1 MGP_LPJ_G0005884.1 mouse_genomes_project 2 23415736 23420405 + Gm26702 lincRNA lincRNA MGP_LPJ_T0007297.1 MGP_LPJ_G0005985.1 mouse_genomes_project 2 107765937 107766794 + 4930527A07Rik lincRNA lincRNA MGP_LPJ_T0058365.1 MGP_LPJ_G0026661.1 mouse_genomes_project 2 159669795 159670571 - Gm14214 protein_coding translated_processed_pseudogene MGP_LPJ_T0058366.1 MGP_LPJ_G0026661.1 mouse_genomes_project 2 159669795 159670473 - MGP_LPJ_P0058366 Gm14214 protein_coding protein_coding MGP_LPJ_T0055333.1 MGP_LPJ_G0025804.1 mouse_genomes_project 2 77493669 77553834 - MGP_LPJ_P0055333 Sestd1 protein_coding unknown_likely_coding MGP_LPJ_T0055334.1 MGP_LPJ_G0025804.1 mouse_genomes_project 2 77504307 77506850 - Sestd1 protein_coding processed_transcript MGP_LPJ_T0055335.1 MGP_LPJ_G0025804.1 mouse_genomes_project 2 77504309 77589108 - Sestd1 protein_coding processed_transcript MGP_LPJ_T0013778.1 MGP_LPJ_G0011869.1 mouse_genomes_project 2 155590836 155591619 + processed_pseudogene processed_pseudogene MGP_LPJ_T0054126.1 MGP_LPJ_G0025562.1 mouse_genomes_project 2 31531958 31786446 - MGP_LPJ_P0054126 Ralgps1 protein_coding protein_coding MGP_LPJ_T0054127.1 MGP_LPJ_G0025562.1 mouse_genomes_project 2 31531962 31786498 - MGP_LPJ_P0054127 Ralgps1 protein_coding protein_coding MGP_LPJ_T0054128.1 MGP_LPJ_G0025562.1 mouse_genomes_project 2 31531962 31786503 - MGP_LPJ_P0054128 Ralgps1 protein_coding protein_coding MGP_LPJ_T0054129.1 MGP_LPJ_G0025562.1 mouse_genomes_project 2 31535514 31786495 - MGP_LPJ_P0054129 Ralgps1 protein_coding protein_coding MGP_LPJ_T0054130.1 MGP_LPJ_G0025562.1 mouse_genomes_project 2 31541848 31556715 - Ralgps1 protein_coding processed_transcript MGP_LPJ_T0054135.1 MGP_LPJ_G0025562.1 mouse_genomes_project 2 31658952 31786487 - Ralgps1 protein_coding retained_intron MGP_LPJ_T0013555.1 MGP_LPJ_G0011646.1 mouse_genomes_project 2 71376124 71377195 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010364.1 MGP_LPJ_G0008482.1 mouse_genomes_project 2 7731077 7731161 + Mir466o miRNA miRNA MGP_LPJ_T0054992.1 MGP_LPJ_G0025735.1 mouse_genomes_project 2 69559153 69560399 + Ppig protein_coding processed_transcript MGP_LPJ_T0054993.1 MGP_LPJ_G0025735.1 mouse_genomes_project 2 69559413 69593843 + MGP_LPJ_P0054993 Ppig protein_coding protein_coding MGP_LPJ_T0054994.1 MGP_LPJ_G0025735.1 mouse_genomes_project 2 69559462 69573564 + Ppig protein_coding processed_transcript MGP_LPJ_T0054995.1 MGP_LPJ_G0025735.1 mouse_genomes_project 2 69559511 69572599 + Ppig protein_coding processed_transcript MGP_LPJ_T0054996.1 MGP_LPJ_G0025735.1 mouse_genomes_project 2 69559701 69593843 + MGP_LPJ_P0054996 Ppig protein_coding protein_coding MGP_LPJ_T0054997.1 MGP_LPJ_G0025735.1 mouse_genomes_project 2 69559934 69576380 + Ppig protein_coding processed_transcript MGP_LPJ_T0054998.1 MGP_LPJ_G0025735.1 mouse_genomes_project 2 69572018 69581573 + Ppig protein_coding processed_transcript MGP_LPJ_T0054999.1 MGP_LPJ_G0025735.1 mouse_genomes_project 2 69572266 69573317 + Ppig protein_coding processed_transcript MGP_LPJ_T0055000.1 MGP_LPJ_G0025735.1 mouse_genomes_project 2 69572435 69573334 + Ppig protein_coding processed_transcript MGP_LPJ_T0055001.1 MGP_LPJ_G0025735.1 mouse_genomes_project 2 69575948 69581659 + Ppig protein_coding processed_transcript MGP_LPJ_T0055002.1 MGP_LPJ_G0025735.1 mouse_genomes_project 2 69581714 69589388 + Ppig protein_coding processed_transcript MGP_LPJ_T0003915.1 MGP_LPJ_G0003503.1 mouse_genomes_project 2 12177064 12205745 - Gm13269 antisense antisense MGP_LPJ_T0003916.1 MGP_LPJ_G0003503.1 mouse_genomes_project 2 12177064 12202200 - Gm13269 antisense antisense MGP_LPJ_T0053306.1 MGP_LPJ_G0025434.1 mouse_genomes_project 2 24851123 24861349 + MGP_LPJ_P0053306 Stkld1 protein_coding protein_coding MGP_LPJ_T0053307.1 MGP_LPJ_G0025434.1 mouse_genomes_project 2 24851145 24871662 + MGP_LPJ_P0053307 Stkld1 protein_coding protein_coding MGP_LPJ_T0053308.1 MGP_LPJ_G0025434.1 mouse_genomes_project 2 24852399 24871557 + MGP_LPJ_P0053308 Stkld1 protein_coding unknown_likely_coding MGP_LPJ_T0055687.1 MGP_LPJ_G0025961.1 mouse_genomes_project 2 88840790 88841723 - MGP_LPJ_P0055687 Olfr1137 protein_coding protein_coding MGP_LPJ_T0056856.1 MGP_LPJ_G0026298.1 mouse_genomes_project 2 123380101 123405283 - MGP_LPJ_P0056856 Pla2g4d protein_coding protein_coding MGP_LPJ_T0004099.1 MGP_LPJ_G0003634.1 mouse_genomes_project 2 132802301 132803786 - Gm14029 antisense antisense MGP_LPJ_T0013667.1 MGP_LPJ_G0011758.1 mouse_genomes_project 2 108365582 108365738 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007167.1 MGP_LPJ_G0005882.1 mouse_genomes_project 2 22925497 22951230 - Gm13387 lincRNA lincRNA MGP_LPJ_T0007168.1 MGP_LPJ_G0005882.1 mouse_genomes_project 2 22945622 22951230 - Gm13387 lincRNA lincRNA MGP_LPJ_T0007169.1 MGP_LPJ_G0005882.1 mouse_genomes_project 2 22949650 22951157 - Gm13387 lincRNA lincRNA MGP_LPJ_T0057643.1 MGP_LPJ_G0026466.1 mouse_genomes_project 2 134981070 134994926 + MGP_LPJ_P0057643 Mavs protein_coding nonsense_mediated_decay MGP_LPJ_T0057644.1 MGP_LPJ_G0026466.1 mouse_genomes_project 2 134981074 134994929 + MGP_LPJ_P0057644 Mavs protein_coding protein_coding MGP_LPJ_T0057645.1 MGP_LPJ_G0026466.1 mouse_genomes_project 2 134981112 134994929 + MGP_LPJ_P0057645 Mavs protein_coding protein_coding MGP_LPJ_T0057646.1 MGP_LPJ_G0026466.1 mouse_genomes_project 2 134988842 134992569 + Mavs protein_coding processed_transcript MGP_LPJ_T0052758.1 MGP_LPJ_G0025339.1 mouse_genomes_project 2 22066443 22080768 + MGP_LPJ_P0052758 Il1rn protein_coding protein_coding MGP_LPJ_T0052759.1 MGP_LPJ_G0025339.1 mouse_genomes_project 2 22066446 22069000 + Il1rn protein_coding retained_intron MGP_LPJ_T0052760.1 MGP_LPJ_G0025339.1 mouse_genomes_project 2 22066446 22078729 + MGP_LPJ_P0052760 Il1rn protein_coding protein_coding MGP_LPJ_T0052761.1 MGP_LPJ_G0025339.1 mouse_genomes_project 2 22074565 22079079 + MGP_LPJ_P0052761 Il1rn protein_coding protein_coding MGP_LPJ_T0052762.1 MGP_LPJ_G0025339.1 mouse_genomes_project 2 22074587 22080210 + MGP_LPJ_P0052762 Il1rn protein_coding protein_coding MGP_LPJ_T0052763.1 MGP_LPJ_G0025339.1 mouse_genomes_project 2 22074625 22075626 + Il1rn protein_coding processed_transcript MGP_LPJ_T0053995.1 MGP_LPJ_G0025541.1 mouse_genomes_project 2 30921070 30923792 + MGP_LPJ_P0053995 Dpm2 protein_coding protein_coding MGP_LPJ_T0053996.1 MGP_LPJ_G0025541.1 mouse_genomes_project 2 30921070 30923776 + MGP_LPJ_P0053996 Dpm2 protein_coding protein_coding MGP_LPJ_T0053997.1 MGP_LPJ_G0025541.1 mouse_genomes_project 2 30921079 30923294 + Dpm2 protein_coding retained_intron MGP_LPJ_T0053998.1 MGP_LPJ_G0025541.1 mouse_genomes_project 2 30922259 30923669 + Dpm2 protein_coding retained_intron MGP_LPJ_T0010380.1 MGP_LPJ_G0008498.1 mouse_genomes_project 2 7784385 7784481 + Mir466d miRNA miRNA MGP_LPJ_T0013438.1 MGP_LPJ_G0011529.1 mouse_genomes_project 2 24951980 24952858 + processed_pseudogene processed_pseudogene MGP_LPJ_T0057979.1 MGP_LPJ_G0026540.1 mouse_genomes_project 2 151573213 151583776 - MGP_LPJ_P0057979 Nkx2-2 protein_coding protein_coding MGP_LPJ_T0057980.1 MGP_LPJ_G0026540.1 mouse_genomes_project 2 151579628 151584079 - MGP_LPJ_P0057980 Nkx2-2 protein_coding protein_coding MGP_LPJ_T0057981.1 MGP_LPJ_G0026540.1 mouse_genomes_project 2 151583979 151594761 - Nkx2-2 protein_coding processed_transcript MGP_LPJ_T0057982.1 MGP_LPJ_G0026540.1 mouse_genomes_project 2 151584056 151594760 - Nkx2-2 protein_coding processed_transcript MGP_LPJ_T0052207.1 MGP_LPJ_G0025243.1 mouse_genomes_project 2 1023041 1183521 + Frmd4a protein_coding processed_transcript MGP_LPJ_T0052208.1 MGP_LPJ_G0025243.1 mouse_genomes_project 2 1023058 1027229 + Frmd4a protein_coding retained_intron MGP_LPJ_T0052209.1 MGP_LPJ_G0025243.1 mouse_genomes_project 2 1023068 1643952 + MGP_LPJ_P0052209 Frmd4a protein_coding protein_coding MGP_LPJ_T0052210.1 MGP_LPJ_G0025243.1 mouse_genomes_project 2 1169480 1187940 + Frmd4a protein_coding processed_transcript MGP_LPJ_T0052211.1 MGP_LPJ_G0025243.1 mouse_genomes_project 2 1169489 1643853 + MGP_LPJ_P0052211 Frmd4a protein_coding protein_coding MGP_LPJ_T0052212.1 MGP_LPJ_G0025243.1 mouse_genomes_project 2 1319698 1602517 + MGP_LPJ_P0052212 Frmd4a protein_coding protein_coding MGP_LPJ_T0052213.1 MGP_LPJ_G0025243.1 mouse_genomes_project 2 1320049 1568032 + Frmd4a protein_coding retained_intron MGP_LPJ_T0052214.1 MGP_LPJ_G0025243.1 mouse_genomes_project 2 1320167 1590335 + MGP_LPJ_P0052214 Frmd4a protein_coding nonsense_mediated_decay MGP_LPJ_T0052215.1 MGP_LPJ_G0025243.1 mouse_genomes_project 2 1350256 1624675 + MGP_LPJ_P0052215 Frmd4a protein_coding protein_coding MGP_LPJ_T0052216.1 MGP_LPJ_G0025243.1 mouse_genomes_project 2 1411839 1558953 + MGP_LPJ_P0052216 Frmd4a protein_coding protein_coding MGP_LPJ_T0052217.1 MGP_LPJ_G0025243.1 mouse_genomes_project 2 1411841 1455616 + Frmd4a protein_coding retained_intron MGP_LPJ_T0052218.1 MGP_LPJ_G0025243.1 mouse_genomes_project 2 1423289 1643954 + MGP_LPJ_P0052218 Frmd4a protein_coding protein_coding MGP_LPJ_T0052219.1 MGP_LPJ_G0025243.1 mouse_genomes_project 2 1423751 1453468 + Frmd4a protein_coding retained_intron MGP_LPJ_T0052220.1 MGP_LPJ_G0025243.1 mouse_genomes_project 2 1423785 1566872 + Frmd4a protein_coding retained_intron MGP_LPJ_T0052221.1 MGP_LPJ_G0025243.1 mouse_genomes_project 2 1444616 1643956 + MGP_LPJ_P0052221 Frmd4a protein_coding protein_coding MGP_LPJ_T0052222.1 MGP_LPJ_G0025243.1 mouse_genomes_project 2 1498426 1523440 + Frmd4a protein_coding retained_intron MGP_LPJ_T0052223.1 MGP_LPJ_G0025243.1 mouse_genomes_project 2 1589828 1627996 + Frmd4a protein_coding retained_intron MGP_LPJ_T0052224.1 MGP_LPJ_G0025243.1 mouse_genomes_project 2 1589849 1618219 + Frmd4a protein_coding retained_intron MGP_LPJ_T0052225.1 MGP_LPJ_G0025243.1 mouse_genomes_project 2 1596254 1624711 + MGP_LPJ_P0052225 Frmd4a protein_coding nonsense_mediated_decay MGP_LPJ_T0010398.1 MGP_LPJ_G0008516.1 mouse_genomes_project 2 17474246 17474322 + Gm44457 miRNA miRNA MGP_LPJ_T0098526.1 MGP_LPJ_G0036801.1 mouse_genomes_project 2 58127452 58156244 + Gm13558 sense_intronic sense_intronic MGP_LPJ_T0057626.1 MGP_LPJ_G0026462.1 mouse_genomes_project 2 134913162 134916879 - MGP_LPJ_P0057626 Spef1 protein_coding protein_coding MGP_LPJ_T0013657.1 MGP_LPJ_G0011748.1 mouse_genomes_project 2 105948725 105949199 - processed_pseudogene processed_pseudogene MGP_LPJ_T0056178.1 MGP_LPJ_G0026120.1 mouse_genomes_project 2 95671952 95673192 - MGP_LPJ_P0056178 protein_coding protein_coding MGP_LPJ_T0056179.1 MGP_LPJ_G0026120.1 mouse_genomes_project 2 95671958 95673344 - MGP_LPJ_P0056179 protein_coding protein_coding MGP_LPJ_T0059743.1 MGP_LPJ_G0026960.1 mouse_genomes_project 2 188194907 188211249 - MGP_LPJ_P0059743 Uckl1 protein_coding protein_coding MGP_LPJ_T0059744.1 MGP_LPJ_G0026960.1 mouse_genomes_project 2 188194911 188196150 - MGP_LPJ_P0059744 Uckl1 protein_coding protein_coding MGP_LPJ_T0059745.1 MGP_LPJ_G0026960.1 mouse_genomes_project 2 188194914 188195560 - Uckl1 protein_coding retained_intron MGP_LPJ_T0059746.1 MGP_LPJ_G0026960.1 mouse_genomes_project 2 188194925 188211253 - MGP_LPJ_P0059746 Uckl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0059747.1 MGP_LPJ_G0026960.1 mouse_genomes_project 2 188194927 188195644 - Uckl1 protein_coding retained_intron MGP_LPJ_T0059748.1 MGP_LPJ_G0026960.1 mouse_genomes_project 2 188194993 188198409 - Uckl1 protein_coding retained_intron MGP_LPJ_T0059749.1 MGP_LPJ_G0026960.1 mouse_genomes_project 2 188195376 188198996 - MGP_LPJ_P0059749 Uckl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0059750.1 MGP_LPJ_G0026960.1 mouse_genomes_project 2 188195415 188198996 - Uckl1 protein_coding retained_intron MGP_LPJ_T0059751.1 MGP_LPJ_G0026960.1 mouse_genomes_project 2 188195526 188197244 - Uckl1 protein_coding retained_intron MGP_LPJ_T0059752.1 MGP_LPJ_G0026960.1 mouse_genomes_project 2 188195612 188199005 - Uckl1 protein_coding retained_intron MGP_LPJ_T0059753.1 MGP_LPJ_G0026960.1 mouse_genomes_project 2 188195768 188200345 - Uckl1 protein_coding processed_transcript MGP_LPJ_T0059754.1 MGP_LPJ_G0026960.1 mouse_genomes_project 2 188196123 188198027 - Uckl1 protein_coding processed_transcript MGP_LPJ_T0059755.1 MGP_LPJ_G0026960.1 mouse_genomes_project 2 188198193 188200369 - Uckl1 protein_coding retained_intron MGP_LPJ_T0059756.1 MGP_LPJ_G0026960.1 mouse_genomes_project 2 188199121 188217959 - MGP_LPJ_P0059756 Uckl1 protein_coding protein_coding MGP_LPJ_T0059757.1 MGP_LPJ_G0026960.1 mouse_genomes_project 2 188199166 188200703 - Uckl1 protein_coding retained_intron MGP_LPJ_T0059758.1 MGP_LPJ_G0026960.1 mouse_genomes_project 2 188199177 188206706 - MGP_LPJ_P0059758 Uckl1 protein_coding protein_coding MGP_LPJ_T0059759.1 MGP_LPJ_G0026960.1 mouse_genomes_project 2 188200153 188211259 - Uckl1 protein_coding retained_intron MGP_LPJ_T0057013.1 MGP_LPJ_G0026321.1 mouse_genomes_project 2 124337615 124356219 - Trp53bp1 protein_coding processed_transcript MGP_LPJ_T0057014.1 MGP_LPJ_G0026321.1 mouse_genomes_project 2 124339173 124415010 - MGP_LPJ_P0057014 Trp53bp1 protein_coding protein_coding MGP_LPJ_T0057015.1 MGP_LPJ_G0026321.1 mouse_genomes_project 2 124339173 124415076 - MGP_LPJ_P0057015 Trp53bp1 protein_coding protein_coding MGP_LPJ_T0057016.1 MGP_LPJ_G0026321.1 mouse_genomes_project 2 124342581 124379928 - MGP_LPJ_P0057016 Trp53bp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0057017.1 MGP_LPJ_G0026321.1 mouse_genomes_project 2 124343969 124349238 - Trp53bp1 protein_coding processed_transcript MGP_LPJ_T0057018.1 MGP_LPJ_G0026321.1 mouse_genomes_project 2 124346957 124352004 - MGP_LPJ_P0057018 Trp53bp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0057019.1 MGP_LPJ_G0026321.1 mouse_genomes_project 2 124349337 124352820 - Trp53bp1 protein_coding processed_transcript MGP_LPJ_T0057020.1 MGP_LPJ_G0026321.1 mouse_genomes_project 2 124352665 124365443 - MGP_LPJ_P0057020 Trp53bp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0057021.1 MGP_LPJ_G0026321.1 mouse_genomes_project 2 124353090 124365434 - Trp53bp1 protein_coding retained_intron MGP_LPJ_T0057022.1 MGP_LPJ_G0026321.1 mouse_genomes_project 2 124355545 124362653 - Trp53bp1 protein_coding processed_transcript MGP_LPJ_T0057023.1 MGP_LPJ_G0026321.1 mouse_genomes_project 2 124360140 124365581 - Trp53bp1 protein_coding retained_intron MGP_LPJ_T0057024.1 MGP_LPJ_G0026321.1 mouse_genomes_project 2 124360376 124414990 - MGP_LPJ_P0057024 Trp53bp1 protein_coding protein_coding MGP_LPJ_T0057025.1 MGP_LPJ_G0026321.1 mouse_genomes_project 2 124372338 124379611 - MGP_LPJ_P0057025 Trp53bp1 protein_coding protein_coding MGP_LPJ_T0057026.1 MGP_LPJ_G0026321.1 mouse_genomes_project 2 124376013 124379743 - Trp53bp1 protein_coding processed_transcript MGP_LPJ_T0057027.1 MGP_LPJ_G0026321.1 mouse_genomes_project 2 124380745 124397046 - MGP_LPJ_P0057027 Trp53bp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0057028.1 MGP_LPJ_G0026321.1 mouse_genomes_project 2 124401545 124415038 - Trp53bp1 protein_coding processed_transcript MGP_LPJ_T0057029.1 MGP_LPJ_G0026321.1 mouse_genomes_project 2 124403683 124413955 - Trp53bp1 protein_coding retained_intron MGP_LPJ_T0057030.1 MGP_LPJ_G0026321.1 mouse_genomes_project 2 124410981 124415030 - Trp53bp1 protein_coding retained_intron MGP_LPJ_T0057031.1 MGP_LPJ_G0026321.1 mouse_genomes_project 2 124413298 124415039 - Trp53bp1 protein_coding retained_intron MGP_LPJ_T0058246.1 MGP_LPJ_G0026625.1 mouse_genomes_project 2 157986258 157989635 - MGP_LPJ_P0058246 Tspyl3 protein_coding protein_coding MGP_LPJ_T0004188.1 MGP_LPJ_G0003701.1 mouse_genomes_project 2 173437500 173448296 + antisense antisense MGP_LPJ_T0053616.1 MGP_LPJ_G0025487.1 mouse_genomes_project 2 28298608 28301185 + MGP_LPJ_P0053616 Endog protein_coding protein_coding MGP_LPJ_T0007217.1 MGP_LPJ_G0005920.1 mouse_genomes_project 2 52126541 52130319 - Gm26603 lincRNA lincRNA MGP_LPJ_T0001126.1 MGP_LPJ_G0001051.1 mouse_genomes_project 2 121031187 121032809 + TEC TEC MGP_LPJ_T0059829.1 MGP_LPJ_G0026973.1 mouse_genomes_project 2 188659843 188672426 + MGP_LPJ_P0059829 Gm14496 protein_coding protein_coding MGP_LPJ_T0059830.1 MGP_LPJ_G0026973.1 mouse_genomes_project 2 188660016 188673072 + Gm14496 protein_coding processed_transcript MGP_LPJ_T0059831.1 MGP_LPJ_G0026973.1 mouse_genomes_project 2 188666798 188672372 + Gm14496 protein_coding transcribed_processed_pseudogene MGP_LPJ_T0059588.1 MGP_LPJ_G0026934.1 mouse_genomes_project 2 187272958 187295993 + MGP_LPJ_P0059588 Slc17a9 protein_coding protein_coding MGP_LPJ_T0059589.1 MGP_LPJ_G0026934.1 mouse_genomes_project 2 187273074 187283405 + Slc17a9 protein_coding retained_intron MGP_LPJ_T0059590.1 MGP_LPJ_G0026934.1 mouse_genomes_project 2 187273095 187287733 + Slc17a9 protein_coding processed_transcript MGP_LPJ_T0059591.1 MGP_LPJ_G0026934.1 mouse_genomes_project 2 187287038 187295052 + Slc17a9 protein_coding processed_transcript MGP_LPJ_T0059592.1 MGP_LPJ_G0026934.1 mouse_genomes_project 2 187288894 187295130 + Slc17a9 protein_coding retained_intron MGP_LPJ_T0054926.1 MGP_LPJ_G0025717.1 mouse_genomes_project 2 66363396 66479773 - MGP_LPJ_P0054926 Scn7a protein_coding protein_coding MGP_LPJ_T0013460.1 MGP_LPJ_G0011551.1 mouse_genomes_project 2 35785634 35786657 + processed_pseudogene processed_pseudogene MGP_LPJ_T0057105.1 MGP_LPJ_G0026335.1 mouse_genomes_project 2 124729993 125016021 - MGP_LPJ_P0057105 Frmd5 protein_coding protein_coding MGP_LPJ_T0057106.1 MGP_LPJ_G0026335.1 mouse_genomes_project 2 124729999 124971978 - MGP_LPJ_P0057106 Frmd5 protein_coding protein_coding MGP_LPJ_T0057107.1 MGP_LPJ_G0026335.1 mouse_genomes_project 2 124729999 125016277 - MGP_LPJ_P0057107 Frmd5 protein_coding protein_coding MGP_LPJ_T0057108.1 MGP_LPJ_G0026335.1 mouse_genomes_project 2 124729999 124773872 - MGP_LPJ_P0057108 Frmd5 protein_coding protein_coding MGP_LPJ_T0057109.1 MGP_LPJ_G0026335.1 mouse_genomes_project 2 124732208 124739963 - MGP_LPJ_P0057109 Frmd5 protein_coding protein_coding MGP_LPJ_T0057110.1 MGP_LPJ_G0026335.1 mouse_genomes_project 2 124732766 124971978 - MGP_LPJ_P0057110 Frmd5 protein_coding protein_coding MGP_LPJ_T0057111.1 MGP_LPJ_G0026335.1 mouse_genomes_project 2 124732768 125016213 - MGP_LPJ_P0057111 Frmd5 protein_coding nonsense_mediated_decay MGP_LPJ_T0057112.1 MGP_LPJ_G0026335.1 mouse_genomes_project 2 124732769 125016182 - MGP_LPJ_P0057112 Frmd5 protein_coding protein_coding MGP_LPJ_T0057113.1 MGP_LPJ_G0026335.1 mouse_genomes_project 2 124733510 124742934 - Frmd5 protein_coding processed_transcript MGP_LPJ_T0057114.1 MGP_LPJ_G0026335.1 mouse_genomes_project 2 124745556 125016247 - Frmd5 protein_coding retained_intron MGP_LPJ_T0057115.1 MGP_LPJ_G0026335.1 mouse_genomes_project 2 124755155 125016062 - MGP_LPJ_P0057115 Frmd5 protein_coding nonsense_mediated_decay MGP_LPJ_T0057116.1 MGP_LPJ_G0026335.1 mouse_genomes_project 2 124755207 124771444 - Frmd5 protein_coding processed_transcript MGP_LPJ_T0007165.1 MGP_LPJ_G0005880.1 mouse_genomes_project 2 22050408 22050941 + Gm13411 lincRNA lincRNA MGP_LPJ_T0013536.1 MGP_LPJ_G0011627.1 mouse_genomes_project 2 61201949 61202648 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100639.1 MGP_LPJ_G0038902.1 mouse_genomes_project 2 164368567 164368699 + Gm25090 snoRNA snoRNA MGP_LPJ_T0013765.1 MGP_LPJ_G0011856.1 mouse_genomes_project 2 151699635 151700611 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001076.1 MGP_LPJ_G0001001.1 mouse_genomes_project 2 11568778 11572252 + TEC TEC MGP_LPJ_T0013462.1 MGP_LPJ_G0011553.1 mouse_genomes_project 2 36262358 36262734 + processed_pseudogene processed_pseudogene MGP_LPJ_T0054804.1 MGP_LPJ_G0025697.1 mouse_genomes_project 2 61209067 61304157 + MGP_LPJ_P0054804 Psmd14 protein_coding protein_coding MGP_LPJ_T0054805.1 MGP_LPJ_G0025697.1 mouse_genomes_project 2 61209115 61219618 + Psmd14 protein_coding processed_transcript MGP_LPJ_T0054806.1 MGP_LPJ_G0025697.1 mouse_genomes_project 2 61209133 61266354 + Psmd14 protein_coding processed_transcript MGP_LPJ_T0054807.1 MGP_LPJ_G0025697.1 mouse_genomes_project 2 61209153 61226105 + Psmd14 protein_coding processed_transcript MGP_LPJ_T0054808.1 MGP_LPJ_G0025697.1 mouse_genomes_project 2 61209164 61262826 + Psmd14 protein_coding processed_transcript MGP_LPJ_T0054809.1 MGP_LPJ_G0025697.1 mouse_genomes_project 2 61213196 61252483 + Psmd14 protein_coding processed_transcript MGP_LPJ_T0054810.1 MGP_LPJ_G0025697.1 mouse_genomes_project 2 61266879 61303834 + Psmd14 protein_coding processed_transcript MGP_LPJ_T0054811.1 MGP_LPJ_G0025697.1 mouse_genomes_project 2 61279498 61303855 + Psmd14 protein_coding processed_transcript MGP_LPJ_T0013768.1 MGP_LPJ_G0011859.1 mouse_genomes_project 2 152099001 152099439 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099354.1 MGP_LPJ_G0037617.1 mouse_genomes_project 2 132941752 132941903 - Gm25703 snRNA snRNA MGP_LPJ_T0007348.1 MGP_LPJ_G0006026.1 mouse_genomes_project 2 137349284 137351951 + Gm14100 lincRNA lincRNA MGP_LPJ_T0052926.1 MGP_LPJ_G0025365.1 mouse_genomes_project 2 23083771 23085143 - Ssna1 protein_coding processed_transcript MGP_LPJ_T0052927.1 MGP_LPJ_G0025365.1 mouse_genomes_project 2 23083771 23085149 - MGP_LPJ_P0052927 Ssna1 protein_coding protein_coding MGP_LPJ_T0052928.1 MGP_LPJ_G0025365.1 mouse_genomes_project 2 23083818 23085171 - Ssna1 protein_coding processed_transcript MGP_LPJ_T0052929.1 MGP_LPJ_G0025365.1 mouse_genomes_project 2 23084438 23085137 - Ssna1 protein_coding processed_transcript MGP_LPJ_T0052922.1 MGP_LPJ_G0025364.1 mouse_genomes_project 2 23075351 23082618 + MGP_LPJ_P0052922 Tprn protein_coding protein_coding MGP_LPJ_T0052923.1 MGP_LPJ_G0025364.1 mouse_genomes_project 2 23076974 23082289 + Tprn protein_coding processed_transcript MGP_LPJ_T0052924.1 MGP_LPJ_G0025364.1 mouse_genomes_project 2 23080296 23081904 + Tprn protein_coding processed_transcript MGP_LPJ_T0052925.1 MGP_LPJ_G0025364.1 mouse_genomes_project 2 23081668 23082248 + Tprn protein_coding processed_transcript MGP_LPJ_T0004204.1 MGP_LPJ_G0003713.1 mouse_genomes_project 2 180537666 180551840 - Nespas antisense antisense MGP_LPJ_T0004205.1 MGP_LPJ_G0003713.1 mouse_genomes_project 2 180538623 180551793 - Nespas antisense antisense MGP_LPJ_T0004206.1 MGP_LPJ_G0003713.1 mouse_genomes_project 2 180540779 180541862 - Nespas antisense antisense MGP_LPJ_T0055620.1 MGP_LPJ_G0025904.1 mouse_genomes_project 2 87148180 87149119 - MGP_LPJ_P0055620 Olfr1054 protein_coding protein_coding MGP_LPJ_T0056738.1 MGP_LPJ_G0026272.1 mouse_genomes_project 2 122259214 122261136 + Zfyve19 protein_coding processed_transcript MGP_LPJ_T0056739.1 MGP_LPJ_G0026272.1 mouse_genomes_project 2 122259609 122261199 + Zfyve19 protein_coding processed_transcript MGP_LPJ_T0056740.1 MGP_LPJ_G0026272.1 mouse_genomes_project 2 122259629 122262362 + Zfyve19 protein_coding processed_transcript MGP_LPJ_T0056741.1 MGP_LPJ_G0026272.1 mouse_genomes_project 2 122259638 122261740 + Zfyve19 protein_coding retained_intron MGP_LPJ_T0056742.1 MGP_LPJ_G0026272.1 mouse_genomes_project 2 122259727 122269631 + MGP_LPJ_P0056742 Zfyve19 protein_coding protein_coding MGP_LPJ_T0056743.1 MGP_LPJ_G0026272.1 mouse_genomes_project 2 122261434 122267466 + Zfyve19 protein_coding retained_intron MGP_LPJ_T0056744.1 MGP_LPJ_G0026272.1 mouse_genomes_project 2 122262058 122262316 + Zfyve19 protein_coding processed_transcript MGP_LPJ_T0056745.1 MGP_LPJ_G0026272.1 mouse_genomes_project 2 122262237 122267488 + Zfyve19 protein_coding retained_intron MGP_LPJ_T0056746.1 MGP_LPJ_G0026272.1 mouse_genomes_project 2 122267032 122268974 + Zfyve19 protein_coding retained_intron MGP_LPJ_T0056747.1 MGP_LPJ_G0026272.1 mouse_genomes_project 2 122268841 122269626 + Zfyve19 protein_coding retained_intron MGP_LPJ_T0056639.1 MGP_LPJ_G0026248.1 mouse_genomes_project 2 121202976 121254827 - MGP_LPJ_P0056639 Fsip1 protein_coding protein_coding MGP_LPJ_T0056640.1 MGP_LPJ_G0026248.1 mouse_genomes_project 2 121242217 121254817 - MGP_LPJ_P0056640 Fsip1 protein_coding protein_coding MGP_LPJ_T0058734.1 MGP_LPJ_G0026721.1 mouse_genomes_project 2 163036171 163067490 + MGP_LPJ_P0058734 Vstm2l protein_coding protein_coding MGP_LPJ_T0055636.1 MGP_LPJ_G0025919.1 mouse_genomes_project 2 87676862 87677798 - MGP_LPJ_P0055636 Olfr1089 protein_coding protein_coding MGP_LPJ_T0057877.1 MGP_LPJ_G0026519.1 mouse_genomes_project 2 148505822 148516996 + MGP_LPJ_P0057877 Mgme1 protein_coding protein_coding MGP_LPJ_T0057878.1 MGP_LPJ_G0026519.1 mouse_genomes_project 2 148506059 148517702 + MGP_LPJ_P0057878 Mgme1 protein_coding protein_coding MGP_LPJ_T0057879.1 MGP_LPJ_G0026519.1 mouse_genomes_project 2 148506100 148516996 + MGP_LPJ_P0057879 Mgme1 protein_coding protein_coding MGP_LPJ_T0055753.1 MGP_LPJ_G0026022.1 mouse_genomes_project 2 90426699 90427635 - MGP_LPJ_P0055753 Olfr1221 protein_coding protein_coding MGP_LPJ_T0056511.1 MGP_LPJ_G0026198.1 mouse_genomes_project 2 113907152 113908310 + MGP_LPJ_P0056511 protein_coding protein_coding MGP_LPJ_T0056999.1 MGP_LPJ_G0026320.1 mouse_genomes_project 2 124314149 124327847 + Tubgcp4 protein_coding processed_transcript MGP_LPJ_T0057000.1 MGP_LPJ_G0026320.1 mouse_genomes_project 2 124314663 124343101 + MGP_LPJ_P0057000 Tubgcp4 protein_coding protein_coding MGP_LPJ_T0057001.1 MGP_LPJ_G0026320.1 mouse_genomes_project 2 124314704 124343100 + MGP_LPJ_P0057001 Tubgcp4 protein_coding protein_coding MGP_LPJ_T0057002.1 MGP_LPJ_G0026320.1 mouse_genomes_project 2 124314710 124343101 + MGP_LPJ_P0057002 Tubgcp4 protein_coding protein_coding MGP_LPJ_T0057003.1 MGP_LPJ_G0026320.1 mouse_genomes_project 2 124314735 124343100 + Tubgcp4 protein_coding retained_intron MGP_LPJ_T0057004.1 MGP_LPJ_G0026320.1 mouse_genomes_project 2 124314741 124319347 + Tubgcp4 protein_coding processed_transcript MGP_LPJ_T0057005.1 MGP_LPJ_G0026320.1 mouse_genomes_project 2 124314763 124338547 + MGP_LPJ_P0057005 Tubgcp4 protein_coding protein_coding MGP_LPJ_T0057006.1 MGP_LPJ_G0026320.1 mouse_genomes_project 2 124314788 124327890 + Tubgcp4 protein_coding processed_transcript MGP_LPJ_T0057007.1 MGP_LPJ_G0026320.1 mouse_genomes_project 2 124315077 124330131 + Tubgcp4 protein_coding retained_intron MGP_LPJ_T0057008.1 MGP_LPJ_G0026320.1 mouse_genomes_project 2 124317091 124327893 + Tubgcp4 protein_coding processed_transcript MGP_LPJ_T0057009.1 MGP_LPJ_G0026320.1 mouse_genomes_project 2 124327029 124328220 + Tubgcp4 protein_coding retained_intron MGP_LPJ_T0057010.1 MGP_LPJ_G0026320.1 mouse_genomes_project 2 124330765 124341380 + Tubgcp4 protein_coding retained_intron MGP_LPJ_T0057011.1 MGP_LPJ_G0026320.1 mouse_genomes_project 2 124331511 124335821 + Tubgcp4 protein_coding retained_intron MGP_LPJ_T0057012.1 MGP_LPJ_G0026320.1 mouse_genomes_project 2 124335354 124340562 + Tubgcp4 protein_coding retained_intron MGP_LPJ_T0004193.1 MGP_LPJ_G0003706.1 mouse_genomes_project 2 176588757 176591123 + Gm14637 antisense antisense MGP_LPJ_T0010421.1 MGP_LPJ_G0008539.1 mouse_genomes_project 2 30638421 30638531 + Mir199b miRNA miRNA MGP_LPJ_T0003923.1 MGP_LPJ_G0003510.1 mouse_genomes_project 2 18032043 18039618 - antisense antisense MGP_LPJ_T0053453.1 MGP_LPJ_G0025465.1 mouse_genomes_project 2 26936104 26944824 - MGP_LPJ_P0053453 Barhl1 protein_coding protein_coding MGP_LPJ_T0053454.1 MGP_LPJ_G0025465.1 mouse_genomes_project 2 26936109 26940921 - Barhl1 protein_coding processed_transcript MGP_LPJ_T0053455.1 MGP_LPJ_G0025465.1 mouse_genomes_project 2 26937394 26944843 - MGP_LPJ_P0053455 Barhl1 protein_coding protein_coding MGP_LPJ_T0053456.1 MGP_LPJ_G0025465.1 mouse_genomes_project 2 26937394 26945083 - MGP_LPJ_P0053456 Barhl1 protein_coding protein_coding MGP_LPJ_T0053457.1 MGP_LPJ_G0025465.1 mouse_genomes_project 2 26938065 26943917 - Barhl1 protein_coding processed_transcript MGP_LPJ_T0102037.1 MGP_LPJ_G0040074.1 mouse_genomes_project 2 87397880 87398822 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013629.1 MGP_LPJ_G0011720.1 mouse_genomes_project 2 93287050 93288308 - processed_pseudogene processed_pseudogene MGP_LPJ_T0056519.1 MGP_LPJ_G0026206.1 mouse_genomes_project 2 114304073 114305012 - MGP_LPJ_P0056519 protein_coding protein_coding MGP_LPJ_T0013539.1 MGP_LPJ_G0011630.1 mouse_genomes_project 2 64153373 64154151 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013543.1 MGP_LPJ_G0011634.1 mouse_genomes_project 2 66130659 66131031 - processed_pseudogene processed_pseudogene MGP_LPJ_T0054114.1 MGP_LPJ_G0025561.1 mouse_genomes_project 2 31374961 31482068 - MGP_LPJ_P0054114 Garnl3 protein_coding protein_coding MGP_LPJ_T0054115.1 MGP_LPJ_G0025561.1 mouse_genomes_project 2 31375111 31481093 - MGP_LPJ_P0054115 Garnl3 protein_coding protein_coding MGP_LPJ_T0054116.1 MGP_LPJ_G0025561.1 mouse_genomes_project 2 31375111 31529978 - MGP_LPJ_P0054116 Garnl3 protein_coding protein_coding MGP_LPJ_T0054117.1 MGP_LPJ_G0025561.1 mouse_genomes_project 2 31395845 31399542 - Garnl3 protein_coding retained_intron MGP_LPJ_T0054118.1 MGP_LPJ_G0025561.1 mouse_genomes_project 2 31400141 31501948 - Garnl3 protein_coding processed_transcript MGP_LPJ_T0054119.1 MGP_LPJ_G0025561.1 mouse_genomes_project 2 31407835 31427400 - MGP_LPJ_P0054119 Garnl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0054120.1 MGP_LPJ_G0025561.1 mouse_genomes_project 2 31411932 31419810 - Garnl3 protein_coding retained_intron MGP_LPJ_T0054121.1 MGP_LPJ_G0025561.1 mouse_genomes_project 2 31440577 31481615 - Garnl3 protein_coding processed_transcript MGP_LPJ_T0054122.1 MGP_LPJ_G0025561.1 mouse_genomes_project 2 31448142 31481282 - Garnl3 protein_coding processed_transcript MGP_LPJ_T0054123.1 MGP_LPJ_G0025561.1 mouse_genomes_project 2 31448147 31530192 - MGP_LPJ_P0054123 Garnl3 protein_coding protein_coding MGP_LPJ_T0054124.1 MGP_LPJ_G0025561.1 mouse_genomes_project 2 31448149 31530196 - MGP_LPJ_P0054124 Garnl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0054125.1 MGP_LPJ_G0025561.1 mouse_genomes_project 2 31448194 31529150 - MGP_LPJ_P0054125 Garnl3 protein_coding protein_coding MGP_LPJ_T0013678.1 MGP_LPJ_G0011769.1 mouse_genomes_project 2 112319623 112320230 - processed_pseudogene processed_pseudogene MGP_LPJ_T0058047.1 MGP_LPJ_G0026568.1 mouse_genomes_project 2 155377341 155421721 + MGP_LPJ_P0058047 Pygb protein_coding protein_coding MGP_LPJ_T0058048.1 MGP_LPJ_G0026568.1 mouse_genomes_project 2 155379608 155404721 + Pygb protein_coding processed_transcript MGP_LPJ_T0058049.1 MGP_LPJ_G0026568.1 mouse_genomes_project 2 155406040 155408479 + Pygb protein_coding retained_intron MGP_LPJ_T0058050.1 MGP_LPJ_G0026568.1 mouse_genomes_project 2 155413571 155418436 + Pygb protein_coding retained_intron MGP_LPJ_T0058051.1 MGP_LPJ_G0026568.1 mouse_genomes_project 2 155418350 155420597 + Pygb protein_coding retained_intron MGP_LPJ_T0017691.1 MGP_LPJ_G0015317.1 mouse_genomes_project 2 23641091 23651647 - Gm13538 processed_transcript processed_transcript MGP_LPJ_T0001108.1 MGP_LPJ_G0001033.1 mouse_genomes_project 2 37860933 37864413 - TEC TEC MGP_LPJ_T0056344.1 MGP_LPJ_G0026152.1 mouse_genomes_project 2 106235053 106275754 + MGP_LPJ_P0056344 Cd59b protein_coding protein_coding MGP_LPJ_T0055011.1 MGP_LPJ_G0025738.1 mouse_genomes_project 2 69678768 69681149 + Klhl23 protein_coding processed_transcript MGP_LPJ_T0055012.1 MGP_LPJ_G0025738.1 mouse_genomes_project 2 69679194 69693799 + MGP_LPJ_P0055012 Klhl23 protein_coding protein_coding MGP_LPJ_T0055013.1 MGP_LPJ_G0025738.1 mouse_genomes_project 2 69681179 69683070 + Klhl23 protein_coding processed_transcript MGP_LPJ_T0102029.1 MGP_LPJ_G0040066.1 mouse_genomes_project 2 86575308 86575996 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013615.1 MGP_LPJ_G0011706.1 mouse_genomes_project 2 88454595 88455753 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013576.1 MGP_LPJ_G0011667.1 mouse_genomes_project 2 78298002 78298796 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011516.1 MGP_LPJ_G0009634.1 mouse_genomes_project 2 68257997 68258239 + Gm26321 misc_RNA misc_RNA MGP_LPJ_T0055749.1 MGP_LPJ_G0026018.1 mouse_genomes_project 2 90311977 90312916 - MGP_LPJ_P0055749 Olfr1215 protein_coding protein_coding MGP_LPJ_T0007347.1 MGP_LPJ_G0006025.1 mouse_genomes_project 2 137317036 137339547 + A430048G15Rik lincRNA lincRNA MGP_LPJ_T0056761.1 MGP_LPJ_G0026278.1 mouse_genomes_project 2 122419638 122422788 + MGP_LPJ_P0056761 Chac1 protein_coding protein_coding MGP_LPJ_T0003969.1 MGP_LPJ_G0003545.1 mouse_genomes_project 2 32258676 32266452 + Nron antisense antisense MGP_LPJ_T0003970.1 MGP_LPJ_G0003545.1 mouse_genomes_project 2 32258688 32265316 + Nron antisense antisense MGP_LPJ_T0003971.1 MGP_LPJ_G0003545.1 mouse_genomes_project 2 32258719 32264299 + Nron antisense antisense MGP_LPJ_T0059124.1 MGP_LPJ_G0026825.1 mouse_genomes_project 2 170888827 170921530 - MGP_LPJ_P0059124 Elmo2 protein_coding protein_coding MGP_LPJ_T0059125.1 MGP_LPJ_G0026825.1 mouse_genomes_project 2 170889951 170927178 - MGP_LPJ_P0059125 Elmo2 protein_coding protein_coding MGP_LPJ_T0059126.1 MGP_LPJ_G0026825.1 mouse_genomes_project 2 170889951 170927178 - MGP_LPJ_P0059126 Elmo2 protein_coding protein_coding MGP_LPJ_T0059127.1 MGP_LPJ_G0026825.1 mouse_genomes_project 2 170889951 170897711 - MGP_LPJ_P0059127 Elmo2 protein_coding protein_coding MGP_LPJ_T0059128.1 MGP_LPJ_G0026825.1 mouse_genomes_project 2 170891889 170927178 - MGP_LPJ_P0059128 Elmo2 protein_coding protein_coding MGP_LPJ_T0059129.1 MGP_LPJ_G0026825.1 mouse_genomes_project 2 170891894 170917595 - MGP_LPJ_P0059129 Elmo2 protein_coding protein_coding MGP_LPJ_T0059130.1 MGP_LPJ_G0026825.1 mouse_genomes_project 2 170899014 170914998 - Elmo2 protein_coding processed_transcript MGP_LPJ_T0059131.1 MGP_LPJ_G0026825.1 mouse_genomes_project 2 170899403 170912450 - MGP_LPJ_P0059131 Elmo2 protein_coding protein_coding MGP_LPJ_T0059132.1 MGP_LPJ_G0026825.1 mouse_genomes_project 2 170905404 170912340 - Elmo2 protein_coding retained_intron MGP_LPJ_T0059133.1 MGP_LPJ_G0026825.1 mouse_genomes_project 2 170909610 170917043 - MGP_LPJ_P0059133 Elmo2 protein_coding nonsense_mediated_decay MGP_LPJ_T0059134.1 MGP_LPJ_G0026825.1 mouse_genomes_project 2 170912377 170917267 - MGP_LPJ_P0059134 Elmo2 protein_coding protein_coding MGP_LPJ_T0059135.1 MGP_LPJ_G0026825.1 mouse_genomes_project 2 170916363 170927178 - MGP_LPJ_P0059135 Elmo2 protein_coding protein_coding MGP_LPJ_T0056054.1 MGP_LPJ_G0026100.1 mouse_genomes_project 2 93527140 93529105 + MGP_LPJ_P0056054 Gm9821 protein_coding protein_coding MGP_LPJ_T0059289.1 MGP_LPJ_G0026856.1 mouse_genomes_project 2 174015082 174042255 - MGP_LPJ_P0059289 Adnp protein_coding protein_coding MGP_LPJ_T0059290.1 MGP_LPJ_G0026856.1 mouse_genomes_project 2 174015082 174042445 - MGP_LPJ_P0059290 Adnp protein_coding protein_coding MGP_LPJ_T0059292.1 MGP_LPJ_G0026856.1 mouse_genomes_project 2 174019058 174042042 - Adnp protein_coding processed_transcript MGP_LPJ_T0059293.1 MGP_LPJ_G0026856.1 mouse_genomes_project 2 174039689 174042042 - Adnp protein_coding retained_intron MGP_LPJ_T0056110.1 MGP_LPJ_G0026108.1 mouse_genomes_project 2 94083596 94090643 - MGP_LPJ_P0056110 Slc35c1 protein_coding protein_coding MGP_LPJ_T0056111.1 MGP_LPJ_G0026108.1 mouse_genomes_project 2 94083599 94091387 - MGP_LPJ_P0056111 Slc35c1 protein_coding protein_coding MGP_LPJ_T0056112.1 MGP_LPJ_G0026108.1 mouse_genomes_project 2 94089534 94090558 - MGP_LPJ_P0056112 Slc35c1 protein_coding protein_coding MGP_LPJ_T0004018.1 MGP_LPJ_G0003581.1 mouse_genomes_project 2 73095936 73105897 + Sp3os antisense antisense MGP_LPJ_T0004019.1 MGP_LPJ_G0003581.1 mouse_genomes_project 2 73104460 73105827 + Sp3os antisense antisense MGP_LPJ_T0010501.1 MGP_LPJ_G0008619.1 mouse_genomes_project 2 174012246 174012343 - Gm24561 miRNA miRNA MGP_LPJ_T0054346.1 MGP_LPJ_G0025610.1 mouse_genomes_project 2 35476423 35477359 - MGP_LPJ_P0054346 Olfr353 protein_coding protein_coding MGP_LPJ_T0001102.1 MGP_LPJ_G0001027.1 mouse_genomes_project 2 36720883 36723750 - TEC TEC MGP_LPJ_T0057660.1 MGP_LPJ_G0026469.1 mouse_genomes_project 2 135251798 135282431 + MGP_LPJ_P0057660 Smox protein_coding protein_coding MGP_LPJ_T0057661.1 MGP_LPJ_G0026469.1 mouse_genomes_project 2 135252066 135287410 + MGP_LPJ_P0057661 Smox protein_coding protein_coding MGP_LPJ_T0057662.1 MGP_LPJ_G0026469.1 mouse_genomes_project 2 135252225 135282470 + MGP_LPJ_P0057662 Smox protein_coding nonsense_mediated_decay MGP_LPJ_T0057663.1 MGP_LPJ_G0026469.1 mouse_genomes_project 2 135252245 135287399 + Smox protein_coding retained_intron MGP_LPJ_T0057664.1 MGP_LPJ_G0026469.1 mouse_genomes_project 2 135252245 135287399 + MGP_LPJ_P0057664 Smox protein_coding protein_coding MGP_LPJ_T0057665.1 MGP_LPJ_G0026469.1 mouse_genomes_project 2 135252245 135287399 + MGP_LPJ_P0057665 Smox protein_coding nonsense_mediated_decay MGP_LPJ_T0057666.1 MGP_LPJ_G0026469.1 mouse_genomes_project 2 135252245 135287399 + MGP_LPJ_P0057666 Smox protein_coding protein_coding MGP_LPJ_T0057667.1 MGP_LPJ_G0026469.1 mouse_genomes_project 2 135252245 135287399 + MGP_LPJ_P0057667 Smox protein_coding protein_coding MGP_LPJ_T0057668.1 MGP_LPJ_G0026469.1 mouse_genomes_project 2 135252245 135287399 + MGP_LPJ_P0057668 Smox protein_coding protein_coding MGP_LPJ_T0057669.1 MGP_LPJ_G0026469.1 mouse_genomes_project 2 135252245 135287399 + MGP_LPJ_P0057669 Smox protein_coding protein_coding MGP_LPJ_T0057670.1 MGP_LPJ_G0026469.1 mouse_genomes_project 2 135252245 135287399 + MGP_LPJ_P0057670 Smox protein_coding protein_coding MGP_LPJ_T0057671.1 MGP_LPJ_G0026469.1 mouse_genomes_project 2 135252266 135288149 + MGP_LPJ_P0057671 Smox protein_coding protein_coding MGP_LPJ_T0057672.1 MGP_LPJ_G0026469.1 mouse_genomes_project 2 135252295 135287394 + MGP_LPJ_P0057672 Smox protein_coding protein_coding MGP_LPJ_T0057673.1 MGP_LPJ_G0026469.1 mouse_genomes_project 2 135252566 135274292 + MGP_LPJ_P0057673 Smox protein_coding protein_coding MGP_LPJ_T0057674.1 MGP_LPJ_G0026469.1 mouse_genomes_project 2 135271066 135274329 + Smox protein_coding processed_transcript MGP_LPJ_T0057675.1 MGP_LPJ_G0026469.1 mouse_genomes_project 2 135282373 135287106 + MGP_LPJ_P0057675 Smox protein_coding nonsense_mediated_decay MGP_LPJ_T0057676.1 MGP_LPJ_G0026469.1 mouse_genomes_project 2 135284121 135287368 + Smox protein_coding retained_intron MGP_LPJ_T0054974.1 MGP_LPJ_G0025730.1 mouse_genomes_project 2 69184765 69214343 + MGP_LPJ_P0054974 Dhrs9 protein_coding protein_coding MGP_LPJ_T0056379.1 MGP_LPJ_G0026161.1 mouse_genomes_project 2 106993610 107057236 - MGP_LPJ_P0056379 Qser1 protein_coding protein_coding MGP_LPJ_T0056711.1 MGP_LPJ_G0026265.1 mouse_genomes_project 2 122077257 122082225 + MGP_LPJ_P0056711 Rpusd2 protein_coding protein_coding MGP_LPJ_T0011529.1 MGP_LPJ_G0009647.1 mouse_genomes_project 2 146553178 146553482 + Gm23179 misc_RNA misc_RNA MGP_LPJ_T0098521.1 MGP_LPJ_G0036796.1 mouse_genomes_project 2 1229963 1232226 + Gm38348 sense_intronic sense_intronic MGP_LPJ_T0057271.1 MGP_LPJ_G0026378.1 mouse_genomes_project 2 130031511 130071293 + MGP_LPJ_P0057271 Slc27a2 protein_coding protein_coding MGP_LPJ_T0057272.1 MGP_LPJ_G0026378.1 mouse_genomes_project 2 130032694 130043828 + Slc27a2 protein_coding processed_transcript MGP_LPJ_T0057273.1 MGP_LPJ_G0026378.1 mouse_genomes_project 2 130035232 130070985 + MGP_LPJ_P0057273 Slc27a2 protein_coding protein_coding MGP_LPJ_T0057274.1 MGP_LPJ_G0026378.1 mouse_genomes_project 2 130043902 130057547 + Slc27a2 protein_coding processed_transcript MGP_LPJ_T0098227.1 MGP_LPJ_G0036508.1 mouse_genomes_project 2 27518485 27518620 + Gm24976 rRNA rRNA MGP_LPJ_T0007137.1 MGP_LPJ_G0005859.1 mouse_genomes_project 2 2222184 2318400 - Gm26776 lincRNA lincRNA MGP_LPJ_T0058956.1 MGP_LPJ_G0026777.1 mouse_genomes_project 2 169729817 169732364 - MGP_LPJ_P0058956 Svs2 protein_coding protein_coding MGP_LPJ_T0058957.1 MGP_LPJ_G0026777.1 mouse_genomes_project 2 169730416 169732163 - MGP_LPJ_P0058957 Svs2 protein_coding protein_coding MGP_LPJ_T0057983.1 MGP_LPJ_G0026541.1 mouse_genomes_project 2 151773728 151779682 + MGP_LPJ_P0057983 Pax1 protein_coding protein_coding MGP_LPJ_T0057984.1 MGP_LPJ_G0026541.1 mouse_genomes_project 2 151776797 151787248 + MGP_LPJ_P0057984 Pax1 protein_coding protein_coding MGP_LPJ_T0057985.1 MGP_LPJ_G0026541.1 mouse_genomes_project 2 151780085 151806583 + Pax1 protein_coding retained_intron MGP_LPJ_T0098240.1 MGP_LPJ_G0036521.1 mouse_genomes_project 2 149654076 149654170 + Gm22731 rRNA rRNA MGP_LPJ_T0052499.1 MGP_LPJ_G0025286.1 mouse_genomes_project 2 10917708 10955893 - MGP_LPJ_P0052499 Trdmt1 protein_coding protein_coding MGP_LPJ_T0052500.1 MGP_LPJ_G0025286.1 mouse_genomes_project 2 10926112 10955875 - Trdmt1 protein_coding processed_transcript MGP_LPJ_T0052501.1 MGP_LPJ_G0025286.1 mouse_genomes_project 2 10932113 10955888 - MGP_LPJ_P0052501 Trdmt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0055797.1 MGP_LPJ_G0026054.1 mouse_genomes_project 2 91281279 91284707 + MGP_LPJ_P0055797 Olfr1258 protein_coding protein_coding MGP_LPJ_T0055798.1 MGP_LPJ_G0026054.1 mouse_genomes_project 2 91283771 91284707 + MGP_LPJ_P0055798 Olfr1258 protein_coding protein_coding MGP_LPJ_T0017819.1 MGP_LPJ_G0015387.1 mouse_genomes_project 2 134611056 134640026 - A730017L22Rik processed_transcript processed_transcript MGP_LPJ_T0017820.1 MGP_LPJ_G0015387.1 mouse_genomes_project 2 134614971 134640049 - A730017L22Rik processed_transcript processed_transcript MGP_LPJ_T0059359.1 MGP_LPJ_G0026870.1 mouse_genomes_project 2 176518750 176526168 + MGP_LPJ_P0059359 Pfdn4 protein_coding protein_coding MGP_LPJ_T0059360.1 MGP_LPJ_G0026870.1 mouse_genomes_project 2 176518751 176526381 + MGP_LPJ_P0059360 Pfdn4 protein_coding protein_coding MGP_LPJ_T0056680.1 MGP_LPJ_G0026258.1 mouse_genomes_project 2 121804730 121809965 + MGP_LPJ_P0056680 Phgr1 protein_coding protein_coding MGP_LPJ_T0056681.1 MGP_LPJ_G0026258.1 mouse_genomes_project 2 121804730 121809966 + MGP_LPJ_P0056681 Phgr1 protein_coding protein_coding MGP_LPJ_T0013797.1 MGP_LPJ_G0011888.1 mouse_genomes_project 2 161392938 161393420 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003935.1 MGP_LPJ_G0003518.1 mouse_genomes_project 2 23641768 23644019 + antisense antisense MGP_LPJ_T0052738.1 MGP_LPJ_G0025331.1 mouse_genomes_project 2 21223569 21293523 - MGP_LPJ_P0052738 Spopl protein_coding protein_coding MGP_LPJ_T0052739.1 MGP_LPJ_G0025331.1 mouse_genomes_project 2 21228014 21293497 - MGP_LPJ_P0052739 Spopl protein_coding nonsense_mediated_decay MGP_LPJ_T0052740.1 MGP_LPJ_G0025331.1 mouse_genomes_project 2 21228612 21293397 - MGP_LPJ_P0052740 Spopl protein_coding nonsense_mediated_decay MGP_LPJ_T0052741.1 MGP_LPJ_G0025331.1 mouse_genomes_project 2 21228876 21232514 - Spopl protein_coding retained_intron MGP_LPJ_T0052742.1 MGP_LPJ_G0025331.1 mouse_genomes_project 2 21236137 21249931 - Spopl protein_coding retained_intron MGP_LPJ_T0052743.1 MGP_LPJ_G0025331.1 mouse_genomes_project 2 21255673 21293525 - MGP_LPJ_P0052743 Spopl protein_coding nonsense_mediated_decay MGP_LPJ_T0059248.1 MGP_LPJ_G0026846.1 mouse_genomes_project 2 173168953 173230060 + MGP_LPJ_P0059248 Slc9a8 protein_coding protein_coding MGP_LPJ_T0059249.1 MGP_LPJ_G0026846.1 mouse_genomes_project 2 173168962 173230058 + MGP_LPJ_P0059249 Slc9a8 protein_coding protein_coding MGP_LPJ_T0059250.1 MGP_LPJ_G0026846.1 mouse_genomes_project 2 173168962 173227696 + MGP_LPJ_P0059250 Slc9a8 protein_coding protein_coding MGP_LPJ_T0059251.1 MGP_LPJ_G0026846.1 mouse_genomes_project 2 173168964 173173376 + Slc9a8 protein_coding retained_intron MGP_LPJ_T0059252.1 MGP_LPJ_G0026846.1 mouse_genomes_project 2 173168971 173195958 + Slc9a8 protein_coding retained_intron MGP_LPJ_T0059253.1 MGP_LPJ_G0026846.1 mouse_genomes_project 2 173168973 173230059 + Slc9a8 protein_coding processed_transcript MGP_LPJ_T0059254.1 MGP_LPJ_G0026846.1 mouse_genomes_project 2 173168978 173184865 + Slc9a8 protein_coding retained_intron MGP_LPJ_T0059255.1 MGP_LPJ_G0026846.1 mouse_genomes_project 2 173168979 173219129 + Slc9a8 protein_coding processed_transcript MGP_LPJ_T0059256.1 MGP_LPJ_G0026846.1 mouse_genomes_project 2 173168983 173230059 + Slc9a8 protein_coding processed_transcript MGP_LPJ_T0059257.1 MGP_LPJ_G0026846.1 mouse_genomes_project 2 173171360 173219156 + Slc9a8 protein_coding processed_transcript MGP_LPJ_T0059258.1 MGP_LPJ_G0026846.1 mouse_genomes_project 2 173199963 173219154 + Slc9a8 protein_coding processed_transcript MGP_LPJ_T0059259.1 MGP_LPJ_G0026846.1 mouse_genomes_project 2 173200052 173222139 + Slc9a8 protein_coding processed_transcript MGP_LPJ_T0059260.1 MGP_LPJ_G0026846.1 mouse_genomes_project 2 173200152 173230059 + Slc9a8 protein_coding processed_transcript MGP_LPJ_T0057591.1 MGP_LPJ_G0026456.1 mouse_genomes_project 2 134781772 134785229 - MGP_LPJ_P0057591 Gfra4 protein_coding protein_coding MGP_LPJ_T0057592.1 MGP_LPJ_G0026456.1 mouse_genomes_project 2 134781779 134783598 - Gfra4 protein_coding retained_intron MGP_LPJ_T0057593.1 MGP_LPJ_G0026456.1 mouse_genomes_project 2 134781780 134783652 - Gfra4 protein_coding retained_intron MGP_LPJ_T0057594.1 MGP_LPJ_G0026456.1 mouse_genomes_project 2 134782316 134784823 - MGP_LPJ_P0057594 Gfra4 protein_coding protein_coding MGP_LPJ_T0057595.1 MGP_LPJ_G0026456.1 mouse_genomes_project 2 134782348 134784823 - MGP_LPJ_P0057595 Gfra4 protein_coding protein_coding MGP_LPJ_T0057596.1 MGP_LPJ_G0026456.1 mouse_genomes_project 2 134782348 134785229 - MGP_LPJ_P0057596 Gfra4 protein_coding protein_coding MGP_LPJ_T0057597.1 MGP_LPJ_G0026456.1 mouse_genomes_project 2 134783372 134785229 - MGP_LPJ_P0057597 Gfra4 protein_coding protein_coding MGP_LPJ_T0057598.1 MGP_LPJ_G0026456.1 mouse_genomes_project 2 134783372 134784823 - MGP_LPJ_P0057598 Gfra4 protein_coding protein_coding MGP_LPJ_T0098241.1 MGP_LPJ_G0036522.1 mouse_genomes_project 2 169649345 169649463 - n-R5s207 rRNA rRNA MGP_LPJ_T0052186.1 MGP_LPJ_G0025239.1 mouse_genomes_project 2 430673 449974 - MGP_LPJ_P0052186 Suv39h2 protein_coding protein_coding MGP_LPJ_T0052187.1 MGP_LPJ_G0025239.1 mouse_genomes_project 2 432480 449903 - MGP_LPJ_P0052187 Suv39h2 protein_coding protein_coding MGP_LPJ_T0052188.1 MGP_LPJ_G0025239.1 mouse_genomes_project 2 432481 449362 - MGP_LPJ_P0052188 Suv39h2 protein_coding protein_coding MGP_LPJ_T0052189.1 MGP_LPJ_G0025239.1 mouse_genomes_project 2 432503 449912 - MGP_LPJ_P0052189 Suv39h2 protein_coding nonsense_mediated_decay MGP_LPJ_T0003928.1 MGP_LPJ_G0003515.1 mouse_genomes_project 2 23103629 23112440 + Grin1os antisense antisense MGP_LPJ_T0057847.1 MGP_LPJ_G0026510.1 mouse_genomes_project 2 146792288 147089751 - MGP_LPJ_P0057847 Kif16b protein_coding protein_coding MGP_LPJ_T0057848.1 MGP_LPJ_G0026510.1 mouse_genomes_project 2 146792295 146823582 - Kif16b protein_coding retained_intron MGP_LPJ_T0007437.1 MGP_LPJ_G0006101.1 mouse_genomes_project 2 177254394 177256842 + Gm14640 lincRNA lincRNA MGP_LPJ_T0058199.1 MGP_LPJ_G0026615.1 mouse_genomes_project 2 157586337 157642419 + MGP_LPJ_P0058199 Tpx2 protein_coding protein_coding MGP_LPJ_T0058200.1 MGP_LPJ_G0026615.1 mouse_genomes_project 2 157586337 157642419 + MGP_LPJ_P0058200 Tpx2 protein_coding protein_coding MGP_LPJ_T0058201.1 MGP_LPJ_G0026615.1 mouse_genomes_project 2 157586351 157641752 + MGP_LPJ_P0058201 Tpx2 protein_coding protein_coding MGP_LPJ_T0058202.1 MGP_LPJ_G0026615.1 mouse_genomes_project 2 157586368 157641752 + MGP_LPJ_P0058202 Tpx2 protein_coding protein_coding MGP_LPJ_T0058203.1 MGP_LPJ_G0026615.1 mouse_genomes_project 2 157586455 157594323 + Tpx2 protein_coding processed_transcript MGP_LPJ_T0058204.1 MGP_LPJ_G0026615.1 mouse_genomes_project 2 157608889 157624398 + Tpx2 protein_coding retained_intron MGP_LPJ_T0058205.1 MGP_LPJ_G0026615.1 mouse_genomes_project 2 157625598 157629107 + Tpx2 protein_coding retained_intron MGP_LPJ_T0058571.1 MGP_LPJ_G0026695.1 mouse_genomes_project 2 161119259 161140367 - MGP_LPJ_P0058571 Nfs1 protein_coding protein_coding MGP_LPJ_T0058572.1 MGP_LPJ_G0026695.1 mouse_genomes_project 2 161119270 161136138 - MGP_LPJ_P0058572 Nfs1 protein_coding protein_coding MGP_LPJ_T0058573.1 MGP_LPJ_G0026695.1 mouse_genomes_project 2 161134814 161140334 - Nfs1 protein_coding retained_intron MGP_LPJ_T0058574.1 MGP_LPJ_G0026695.1 mouse_genomes_project 2 161138095 161140361 - MGP_LPJ_P0058574 Nfs1 protein_coding protein_coding MGP_LPJ_T0004093.1 MGP_LPJ_G0003631.1 mouse_genomes_project 2 131231238 131240405 + Gm14244 antisense antisense MGP_LPJ_T0013371.1 MGP_LPJ_G0011462.1 mouse_genomes_project 2 683150 684219 + processed_pseudogene processed_pseudogene MGP_LPJ_T0053774.1 MGP_LPJ_G0025511.1 mouse_genomes_project 2 29188103 29232421 + MGP_LPJ_P0053774 Usp20 protein_coding protein_coding MGP_LPJ_T0053775.1 MGP_LPJ_G0025511.1 mouse_genomes_project 2 29188158 29190059 + Usp20 protein_coding retained_intron MGP_LPJ_T0053776.1 MGP_LPJ_G0025511.1 mouse_genomes_project 2 29188187 29216427 + MGP_LPJ_P0053776 Usp20 protein_coding protein_coding MGP_LPJ_T0053777.1 MGP_LPJ_G0025511.1 mouse_genomes_project 2 29188221 29211782 + MGP_LPJ_P0053777 Usp20 protein_coding protein_coding MGP_LPJ_T0053778.1 MGP_LPJ_G0025511.1 mouse_genomes_project 2 29188253 29208940 + MGP_LPJ_P0053778 Usp20 protein_coding protein_coding MGP_LPJ_T0053779.1 MGP_LPJ_G0025511.1 mouse_genomes_project 2 29202656 29211451 + MGP_LPJ_P0053779 Usp20 protein_coding protein_coding MGP_LPJ_T0053780.1 MGP_LPJ_G0025511.1 mouse_genomes_project 2 29202757 29211782 + MGP_LPJ_P0053780 Usp20 protein_coding protein_coding MGP_LPJ_T0053781.1 MGP_LPJ_G0025511.1 mouse_genomes_project 2 29203043 29232417 + MGP_LPJ_P0053781 Usp20 protein_coding protein_coding MGP_LPJ_T0053782.1 MGP_LPJ_G0025511.1 mouse_genomes_project 2 29203049 29215228 + Usp20 protein_coding processed_transcript MGP_LPJ_T0053783.1 MGP_LPJ_G0025511.1 mouse_genomes_project 2 29207706 29215257 + MGP_LPJ_P0053783 Usp20 protein_coding protein_coding MGP_LPJ_T0053784.1 MGP_LPJ_G0025511.1 mouse_genomes_project 2 29211393 29212559 + Usp20 protein_coding retained_intron MGP_LPJ_T0053785.1 MGP_LPJ_G0025511.1 mouse_genomes_project 2 29228653 29230216 + Usp20 protein_coding retained_intron MGP_LPJ_T0055730.1 MGP_LPJ_G0026001.1 mouse_genomes_project 2 89990149 89991094 - MGP_LPJ_P0055730 Olfr1196 protein_coding protein_coding MGP_LPJ_T0098525.1 MGP_LPJ_G0036800.1 mouse_genomes_project 2 18550063 18559596 - Gm13380 sense_intronic sense_intronic MGP_LPJ_T0017743.1 MGP_LPJ_G0015353.1 mouse_genomes_project 2 88143644 88147881 - Gm13734 processed_transcript processed_transcript MGP_LPJ_T0003986.1 MGP_LPJ_G0003558.1 mouse_genomes_project 2 57566611 57579674 + Gm13546 antisense antisense MGP_LPJ_T0003987.1 MGP_LPJ_G0003558.1 mouse_genomes_project 2 57572347 57578948 + Gm13546 antisense antisense MGP_LPJ_T0053270.1 MGP_LPJ_G0025428.1 mouse_genomes_project 2 24800321 24804241 - Surf6 protein_coding processed_transcript MGP_LPJ_T0053271.1 MGP_LPJ_G0025428.1 mouse_genomes_project 2 24800618 24803803 - Surf6 protein_coding processed_transcript MGP_LPJ_T0053272.1 MGP_LPJ_G0025428.1 mouse_genomes_project 2 24800682 24815224 - Surf6 protein_coding processed_transcript MGP_LPJ_T0053273.1 MGP_LPJ_G0025428.1 mouse_genomes_project 2 24802064 24818678 - MGP_LPJ_P0053273 Surf6 protein_coding protein_coding MGP_LPJ_T0053274.1 MGP_LPJ_G0025428.1 mouse_genomes_project 2 24802401 24818649 - MGP_LPJ_P0053274 Surf6 protein_coding protein_coding MGP_LPJ_T0053275.1 MGP_LPJ_G0025428.1 mouse_genomes_project 2 24804304 24818589 - Surf6 protein_coding processed_transcript MGP_LPJ_T0053276.1 MGP_LPJ_G0025428.1 mouse_genomes_project 2 24814892 24815567 - Surf6 protein_coding processed_transcript MGP_LPJ_T0099335.1 MGP_LPJ_G0037598.1 mouse_genomes_project 2 74803164 74803271 + Gm22975 snRNA snRNA MGP_LPJ_T0013811.1 MGP_LPJ_G0011902.1 mouse_genomes_project 2 166584966 166585968 - processed_pseudogene processed_pseudogene MGP_LPJ_T0056621.1 MGP_LPJ_G0026243.1 mouse_genomes_project 2 119813136 119826585 + MGP_LPJ_P0056621 Tmco5 protein_coding protein_coding MGP_LPJ_T0056622.1 MGP_LPJ_G0026243.1 mouse_genomes_project 2 119813139 119826541 + MGP_LPJ_P0056622 Tmco5 protein_coding protein_coding MGP_LPJ_T0056623.1 MGP_LPJ_G0026243.1 mouse_genomes_project 2 119813153 119826898 + MGP_LPJ_P0056623 Tmco5 protein_coding protein_coding MGP_LPJ_T0056624.1 MGP_LPJ_G0026243.1 mouse_genomes_project 2 119822608 119826898 + Tmco5 protein_coding processed_transcript MGP_LPJ_T0053104.1 MGP_LPJ_G0025400.1 mouse_genomes_project 2 23622720 23625251 + MGP_LPJ_P0053104 Lcn3 protein_coding protein_coding MGP_LPJ_T0054829.1 MGP_LPJ_G0025701.1 mouse_genomes_project 2 61993066 62002185 - MGP_LPJ_P0054829 Gcg protein_coding protein_coding MGP_LPJ_T0054830.1 MGP_LPJ_G0025701.1 mouse_genomes_project 2 61994267 62002180 - MGP_LPJ_P0054830 Gcg protein_coding protein_coding MGP_LPJ_T0054831.1 MGP_LPJ_G0025701.1 mouse_genomes_project 2 61995105 61999213 - Gcg protein_coding processed_transcript MGP_LPJ_T0052937.1 MGP_LPJ_G0025369.1 mouse_genomes_project 2 23103590 23135456 - MGP_LPJ_P0052937 Grin1 protein_coding protein_coding MGP_LPJ_T0052938.1 MGP_LPJ_G0025369.1 mouse_genomes_project 2 23103590 23135481 - MGP_LPJ_P0052938 Grin1 protein_coding protein_coding MGP_LPJ_T0052939.1 MGP_LPJ_G0025369.1 mouse_genomes_project 2 23103590 23135481 - MGP_LPJ_P0052939 Grin1 protein_coding protein_coding MGP_LPJ_T0052940.1 MGP_LPJ_G0025369.1 mouse_genomes_project 2 23103590 23135481 - MGP_LPJ_P0052940 Grin1 protein_coding protein_coding MGP_LPJ_T0052941.1 MGP_LPJ_G0025369.1 mouse_genomes_project 2 23103590 23135456 - MGP_LPJ_P0052941 Grin1 protein_coding protein_coding MGP_LPJ_T0052942.1 MGP_LPJ_G0025369.1 mouse_genomes_project 2 23103590 23135548 - MGP_LPJ_P0052942 Grin1 protein_coding protein_coding MGP_LPJ_T0052943.1 MGP_LPJ_G0025369.1 mouse_genomes_project 2 23103590 23135456 - MGP_LPJ_P0052943 Grin1 protein_coding protein_coding MGP_LPJ_T0052944.1 MGP_LPJ_G0025369.1 mouse_genomes_project 2 23103590 23135456 - MGP_LPJ_P0052944 Grin1 protein_coding protein_coding MGP_LPJ_T0052945.1 MGP_LPJ_G0025369.1 mouse_genomes_project 2 23103766 23118422 - Grin1 protein_coding processed_transcript MGP_LPJ_T0052946.1 MGP_LPJ_G0025369.1 mouse_genomes_project 2 23104467 23109089 - Grin1 protein_coding processed_transcript MGP_LPJ_T0052947.1 MGP_LPJ_G0025369.1 mouse_genomes_project 2 23118117 23121461 - Grin1 protein_coding processed_transcript MGP_LPJ_T0052948.1 MGP_LPJ_G0025369.1 mouse_genomes_project 2 23118220 23121758 - Grin1 protein_coding processed_transcript MGP_LPJ_T0052949.1 MGP_LPJ_G0025369.1 mouse_genomes_project 2 23127161 23135487 - Grin1 protein_coding processed_transcript MGP_LPJ_T0052950.1 MGP_LPJ_G0025369.1 mouse_genomes_project 2 23130761 23135524 - Grin1 protein_coding processed_transcript MGP_LPJ_T0053684.1 MGP_LPJ_G0025498.1 mouse_genomes_project 2 28525984 28534227 + MGP_LPJ_P0053684 Dolpp1 protein_coding protein_coding MGP_LPJ_T0053685.1 MGP_LPJ_G0025498.1 mouse_genomes_project 2 28526146 28534225 + MGP_LPJ_P0053685 Dolpp1 protein_coding protein_coding MGP_LPJ_T0053686.1 MGP_LPJ_G0025498.1 mouse_genomes_project 2 28526146 28534225 + MGP_LPJ_P0053686 Dolpp1 protein_coding protein_coding MGP_LPJ_T0053687.1 MGP_LPJ_G0025498.1 mouse_genomes_project 2 28526158 28531022 + Dolpp1 protein_coding retained_intron MGP_LPJ_T0053688.1 MGP_LPJ_G0025498.1 mouse_genomes_project 2 28526160 28529630 + Dolpp1 protein_coding retained_intron MGP_LPJ_T0053689.1 MGP_LPJ_G0025498.1 mouse_genomes_project 2 28526169 28534226 + MGP_LPJ_P0053689 Dolpp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053690.1 MGP_LPJ_G0025498.1 mouse_genomes_project 2 28526170 28529875 + Dolpp1 protein_coding retained_intron MGP_LPJ_T0053691.1 MGP_LPJ_G0025498.1 mouse_genomes_project 2 28526175 28533386 + MGP_LPJ_P0053691 Dolpp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0053692.1 MGP_LPJ_G0025498.1 mouse_genomes_project 2 28526184 28531514 + Dolpp1 protein_coding retained_intron MGP_LPJ_T0053693.1 MGP_LPJ_G0025498.1 mouse_genomes_project 2 28529316 28534225 + Dolpp1 protein_coding processed_transcript MGP_LPJ_T0053694.1 MGP_LPJ_G0025498.1 mouse_genomes_project 2 28531127 28533686 + Dolpp1 protein_coding processed_transcript MGP_LPJ_T0013540.1 MGP_LPJ_G0011631.1 mouse_genomes_project 2 64886410 64887420 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013391.1 MGP_LPJ_G0011482.1 mouse_genomes_project 2 8736005 8737002 + processed_pseudogene processed_pseudogene MGP_LPJ_T0058268.1 MGP_LPJ_G0026631.1 mouse_genomes_project 2 158289773 158292444 + MGP_LPJ_P0058268 4930404H24Rik protein_coding protein_coding MGP_LPJ_T0054274.1 MGP_LPJ_G0025584.1 mouse_genomes_project 2 33911481 33924976 - MGP_LPJ_P0054274 4930568D16Rik protein_coding protein_coding MGP_LPJ_T0013679.1 MGP_LPJ_G0011770.1 mouse_genomes_project 2 112748889 112749874 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013774.1 MGP_LPJ_G0011865.1 mouse_genomes_project 2 154958404 154958799 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013538.1 MGP_LPJ_G0011629.1 mouse_genomes_project 2 62195846 62197434 - processed_pseudogene processed_pseudogene MGP_LPJ_T0057921.1 MGP_LPJ_G0026529.1 mouse_genomes_project 2 149084751 149085511 + MGP_LPJ_P0057921 Scp2d1 protein_coding protein_coding MGP_LPJ_T0098228.1 MGP_LPJ_G0036509.1 mouse_genomes_project 2 61301038 61301155 + Gm25966 rRNA rRNA MGP_LPJ_T0007157.1 MGP_LPJ_G0005875.1 mouse_genomes_project 2 14678988 14682733 - Gm13322 lincRNA lincRNA MGP_LPJ_T0099344.1 MGP_LPJ_G0037607.1 mouse_genomes_project 2 112759395 112759502 + Gm22997 snRNA snRNA MGP_LPJ_T0053695.1 MGP_LPJ_G0025499.1 mouse_genomes_project 2 28534168 28549490 - MGP_LPJ_P0053695 Crat protein_coding protein_coding MGP_LPJ_T0053696.1 MGP_LPJ_G0025499.1 mouse_genomes_project 2 28534173 28540382 - Crat protein_coding processed_transcript MGP_LPJ_T0053697.1 MGP_LPJ_G0025499.1 mouse_genomes_project 2 28534798 28549532 - MGP_LPJ_P0053697 Crat protein_coding protein_coding MGP_LPJ_T0053698.1 MGP_LPJ_G0025499.1 mouse_genomes_project 2 28536195 28538990 - MGP_LPJ_P0053698 Crat protein_coding protein_coding MGP_LPJ_T0053699.1 MGP_LPJ_G0025499.1 mouse_genomes_project 2 28536275 28549243 - MGP_LPJ_P0053699 Crat protein_coding protein_coding MGP_LPJ_T0053700.1 MGP_LPJ_G0025499.1 mouse_genomes_project 2 28536334 28538663 - MGP_LPJ_P0053700 Crat protein_coding protein_coding MGP_LPJ_T0053701.1 MGP_LPJ_G0025499.1 mouse_genomes_project 2 28541797 28549027 - MGP_LPJ_P0053701 Crat protein_coding protein_coding MGP_LPJ_T0053702.1 MGP_LPJ_G0025499.1 mouse_genomes_project 2 28541842 28549267 - MGP_LPJ_P0053702 Crat protein_coding nonsense_mediated_decay MGP_LPJ_T0053703.1 MGP_LPJ_G0025499.1 mouse_genomes_project 2 28546760 28548058 - Crat protein_coding processed_transcript MGP_LPJ_T0053704.1 MGP_LPJ_G0025499.1 mouse_genomes_project 2 28546856 28549237 - MGP_LPJ_P0053704 Crat protein_coding protein_coding MGP_LPJ_T0053705.1 MGP_LPJ_G0025499.1 mouse_genomes_project 2 28546877 28549052 - MGP_LPJ_P0053705 Crat protein_coding protein_coding MGP_LPJ_T0053706.1 MGP_LPJ_G0025499.1 mouse_genomes_project 2 28547778 28549319 - Crat protein_coding processed_transcript MGP_LPJ_T0053707.1 MGP_LPJ_G0025499.1 mouse_genomes_project 2 28548313 28549126 - MGP_LPJ_P0053707 Crat protein_coding protein_coding MGP_LPJ_T0053466.1 MGP_LPJ_G0025468.1 mouse_genomes_project 2 27167111 27173565 + MGP_LPJ_P0053466 Setx protein_coding protein_coding MGP_LPJ_T0053467.1 MGP_LPJ_G0025468.1 mouse_genomes_project 2 27167922 27232845 + MGP_LPJ_P0053467 Setx protein_coding protein_coding MGP_LPJ_T0053468.1 MGP_LPJ_G0025468.1 mouse_genomes_project 2 27168816 27173769 + Setx protein_coding retained_intron MGP_LPJ_T0053469.1 MGP_LPJ_G0025468.1 mouse_genomes_project 2 27202443 27207977 + Setx protein_coding processed_transcript MGP_LPJ_T0053470.1 MGP_LPJ_G0025468.1 mouse_genomes_project 2 27209672 27229029 + MGP_LPJ_P0053470 Setx protein_coding protein_coding MGP_LPJ_T0010438.1 MGP_LPJ_G0008556.1 mouse_genomes_project 2 64980271 64980376 - Mir6337 miRNA miRNA MGP_LPJ_T0052631.1 MGP_LPJ_G0025312.1 mouse_genomes_project 2 16925656 16936952 + Msrb2 protein_coding processed_transcript MGP_LPJ_T0052632.1 MGP_LPJ_G0025312.1 mouse_genomes_project 2 16925852 16951874 + MGP_LPJ_P0052632 Msrb2 protein_coding protein_coding MGP_LPJ_T0052633.1 MGP_LPJ_G0025312.1 mouse_genomes_project 2 16925884 16950218 + Msrb2 protein_coding processed_transcript MGP_LPJ_T0052634.1 MGP_LPJ_G0025312.1 mouse_genomes_project 2 16926057 16951162 + Msrb2 protein_coding processed_transcript MGP_LPJ_T0057098.1 MGP_LPJ_G0026332.1 mouse_genomes_project 2 124627707 124684371 - MGP_LPJ_P0057098 protein_coding protein_coding MGP_LPJ_T0056120.1 MGP_LPJ_G0026112.1 mouse_genomes_project 2 94878162 94890771 + MGP_LPJ_P0056120 Trp53i11 protein_coding protein_coding MGP_LPJ_T0056121.1 MGP_LPJ_G0026112.1 mouse_genomes_project 2 94878162 94893611 + MGP_LPJ_P0056121 Trp53i11 protein_coding protein_coding MGP_LPJ_T0056122.1 MGP_LPJ_G0026112.1 mouse_genomes_project 2 94878175 94891301 + Trp53i11 protein_coding processed_transcript MGP_LPJ_T0056123.1 MGP_LPJ_G0026112.1 mouse_genomes_project 2 94878175 94892160 + Trp53i11 protein_coding processed_transcript MGP_LPJ_T0056124.1 MGP_LPJ_G0026112.1 mouse_genomes_project 2 94878198 94893601 + MGP_LPJ_P0056124 Trp53i11 protein_coding protein_coding MGP_LPJ_T0056125.1 MGP_LPJ_G0026112.1 mouse_genomes_project 2 94878284 94880177 + Trp53i11 protein_coding processed_transcript MGP_LPJ_T0056126.1 MGP_LPJ_G0026112.1 mouse_genomes_project 2 94879805 94893609 + Trp53i11 protein_coding processed_transcript MGP_LPJ_T0056127.1 MGP_LPJ_G0026112.1 mouse_genomes_project 2 94890770 94892450 + Trp53i11 protein_coding processed_transcript MGP_LPJ_T0100618.1 MGP_LPJ_G0038881.1 mouse_genomes_project 2 133986505 133986577 + Snord57 snoRNA snoRNA MGP_LPJ_T0007170.1 MGP_LPJ_G0005883.1 mouse_genomes_project 2 23144982 23151261 - AA543186 lincRNA lincRNA MGP_LPJ_T0054020.1 MGP_LPJ_G0025546.1 mouse_genomes_project 2 30973649 30987154 + MGP_LPJ_P0054020 Ak1 protein_coding protein_coding MGP_LPJ_T0054021.1 MGP_LPJ_G0025546.1 mouse_genomes_project 2 30977328 30987150 + MGP_LPJ_P0054021 Ak1 protein_coding protein_coding MGP_LPJ_T0054022.1 MGP_LPJ_G0025546.1 mouse_genomes_project 2 30977329 30983229 + MGP_LPJ_P0054022 Ak1 protein_coding protein_coding MGP_LPJ_T0054023.1 MGP_LPJ_G0025546.1 mouse_genomes_project 2 30980386 30983192 + MGP_LPJ_P0054023 Ak1 protein_coding protein_coding MGP_LPJ_T0054024.1 MGP_LPJ_G0025546.1 mouse_genomes_project 2 30981500 30987148 + MGP_LPJ_P0054024 Ak1 protein_coding protein_coding MGP_LPJ_T0054025.1 MGP_LPJ_G0025546.1 mouse_genomes_project 2 30981517 30985496 + Ak1 protein_coding retained_intron MGP_LPJ_T0098517.1 MGP_LPJ_G0036792.1 mouse_genomes_project 2 1102329 1105679 + Gm10862 sense_intronic sense_intronic MGP_LPJ_T0001060.1 MGP_LPJ_G0000985.1 mouse_genomes_project 2 8674795 8677006 - TEC TEC MGP_LPJ_T0007159.1 MGP_LPJ_G0005877.1 mouse_genomes_project 2 16904229 16909457 + 4930447M23Rik lincRNA lincRNA MGP_LPJ_T0007160.1 MGP_LPJ_G0005877.1 mouse_genomes_project 2 16904750 16912594 + 4930447M23Rik lincRNA lincRNA MGP_LPJ_T0007161.1 MGP_LPJ_G0005877.1 mouse_genomes_project 2 16904849 16909191 + 4930447M23Rik lincRNA lincRNA MGP_LPJ_T0057238.1 MGP_LPJ_G0026370.1 mouse_genomes_project 2 129104627 129106318 + MGP_LPJ_P0057238 Eid1 protein_coding protein_coding MGP_LPJ_T0010386.1 MGP_LPJ_G0008504.1 mouse_genomes_project 2 7786969 7787049 + Mir466g miRNA miRNA MGP_LPJ_T0013591.1 MGP_LPJ_G0011682.1 mouse_genomes_project 2 81407696 81408311 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017740.1 MGP_LPJ_G0015350.1 mouse_genomes_project 2 84233663 84256807 - Gm13684 processed_transcript processed_transcript MGP_LPJ_T0058163.1 MGP_LPJ_G0026597.1 mouse_genomes_project 2 157163719 157170702 - MGP_LPJ_P0058163 Defb23 protein_coding protein_coding MGP_LPJ_T0013531.1 MGP_LPJ_G0011622.1 mouse_genomes_project 2 59709440 59710069 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004157.1 MGP_LPJ_G0003678.1 mouse_genomes_project 2 161383612 161384682 - Gm14170 antisense antisense MGP_LPJ_T0054852.1 MGP_LPJ_G0025706.1 mouse_genomes_project 2 63549470 63681014 - MGP_LPJ_P0054852 Fign protein_coding protein_coding MGP_LPJ_T0054853.1 MGP_LPJ_G0025706.1 mouse_genomes_project 2 63555276 63681040 - MGP_LPJ_P0054853 Fign protein_coding nonsense_mediated_decay MGP_LPJ_T0054854.1 MGP_LPJ_G0025706.1 mouse_genomes_project 2 63558376 63680990 - Fign protein_coding processed_transcript MGP_LPJ_T0054855.1 MGP_LPJ_G0025706.1 mouse_genomes_project 2 63558545 63681012 - Fign protein_coding processed_transcript MGP_LPJ_T0001051.1 MGP_LPJ_G0000976.1 mouse_genomes_project 2 3588934 3592386 + TEC TEC MGP_LPJ_T0059566.1 MGP_LPJ_G0026929.1 mouse_genomes_project 2 187125792 187132384 + MGP_LPJ_P0059566 Ogfr protein_coding protein_coding MGP_LPJ_T0059567.1 MGP_LPJ_G0026929.1 mouse_genomes_project 2 187126009 187130397 + Ogfr protein_coding retained_intron MGP_LPJ_T0053028.1 MGP_LPJ_G0025380.1 mouse_genomes_project 2 23296484 23300828 - MGP_LPJ_P0053028 Ptgds protein_coding protein_coding MGP_LPJ_T0053029.1 MGP_LPJ_G0025380.1 mouse_genomes_project 2 23296484 23300624 - MGP_LPJ_P0053029 Ptgds protein_coding protein_coding MGP_LPJ_T0053030.1 MGP_LPJ_G0025380.1 mouse_genomes_project 2 23296484 23300531 - MGP_LPJ_P0053030 Ptgds protein_coding protein_coding MGP_LPJ_T0053031.1 MGP_LPJ_G0025380.1 mouse_genomes_project 2 23296486 23300165 - Ptgds protein_coding retained_intron MGP_LPJ_T0053032.1 MGP_LPJ_G0025380.1 mouse_genomes_project 2 23296487 23299939 - Ptgds protein_coding processed_transcript MGP_LPJ_T0004073.1 MGP_LPJ_G0003615.1 mouse_genomes_project 2 116276130 116279486 - Gm13964 antisense antisense MGP_LPJ_T0102053.1 MGP_LPJ_G0040090.1 mouse_genomes_project 2 89770526 89771438 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0100561.1 MGP_LPJ_G0038824.1 mouse_genomes_project 2 17274570 17274702 + Gm24670 snoRNA snoRNA MGP_LPJ_T0013519.1 MGP_LPJ_G0011610.1 mouse_genomes_project 2 57033116 57033293 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102042.1 MGP_LPJ_G0040079.1 mouse_genomes_project 2 88593904 88594762 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0004144.1 MGP_LPJ_G0003666.1 mouse_genomes_project 2 156756617 156758571 - AA387200 antisense antisense MGP_LPJ_T0054058.1 MGP_LPJ_G0025552.1 mouse_genomes_project 2 31123044 31142233 - MGP_LPJ_P0054058 Ttc16 protein_coding protein_coding MGP_LPJ_T0054067.1 MGP_LPJ_G0025552.1 mouse_genomes_project 2 31128906 31142434 - MGP_LPJ_P0054067 Ttc16 protein_coding protein_coding MGP_LPJ_T0054068.1 MGP_LPJ_G0025552.1 mouse_genomes_project 2 31129069 31142287 - MGP_LPJ_P0054068 Ttc16 protein_coding protein_coding MGP_LPJ_T0054069.1 MGP_LPJ_G0025552.1 mouse_genomes_project 2 31130857 31142483 - MGP_LPJ_P0054069 Ttc16 protein_coding nonsense_mediated_decay MGP_LPJ_T0054070.1 MGP_LPJ_G0025552.1 mouse_genomes_project 2 31139609 31142437 - Ttc16 protein_coding retained_intron MGP_LPJ_T0054071.1 MGP_LPJ_G0025552.1 mouse_genomes_project 2 31141356 31142481 - MGP_LPJ_P0054071 Ttc16 protein_coding protein_coding MGP_LPJ_T0098226.1 MGP_LPJ_G0036507.1 mouse_genomes_project 2 18819193 18819324 + Gm25368 rRNA rRNA MGP_LPJ_T0004089.1 MGP_LPJ_G0003627.1 mouse_genomes_project 2 126019692 126025541 - Bloc1s6os antisense antisense MGP_LPJ_T0013780.1 MGP_LPJ_G0011871.1 mouse_genomes_project 2 156472242 156473380 - processed_pseudogene processed_pseudogene MGP_LPJ_T0057905.1 MGP_LPJ_G0026525.1 mouse_genomes_project 2 148795941 148804492 - MGP_LPJ_P0057905 Rbbp9 protein_coding protein_coding MGP_LPJ_T0057906.1 MGP_LPJ_G0026525.1 mouse_genomes_project 2 148797490 148804413 - Rbbp9 protein_coding processed_transcript MGP_LPJ_T0057750.1 MGP_LPJ_G0026489.1 mouse_genomes_project 2 138404211 138452705 - MGP_LPJ_P0057750 Hao1 protein_coding protein_coding MGP_LPJ_T0057751.1 MGP_LPJ_G0026489.1 mouse_genomes_project 2 138430052 138452644 - Hao1 protein_coding processed_transcript MGP_LPJ_T0013401.1 MGP_LPJ_G0011492.1 mouse_genomes_project 2 12838849 12839822 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004208.1 MGP_LPJ_G0003715.1 mouse_genomes_project 2 186854801 186862779 + Gata5os antisense antisense MGP_LPJ_T0013433.1 MGP_LPJ_G0011524.1 mouse_genomes_project 2 23380341 23380581 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007194.1 MGP_LPJ_G0005901.1 mouse_genomes_project 2 33780147 33781872 + Gm13605 lincRNA lincRNA MGP_LPJ_T0054131.1 MGP_LPJ_G0025563.1 mouse_genomes_project 2 31615348 31647250 + MGP_LPJ_P0054131 Angptl2 protein_coding protein_coding MGP_LPJ_T0054132.1 MGP_LPJ_G0025563.1 mouse_genomes_project 2 31615352 31644052 + Angptl2 protein_coding retained_intron MGP_LPJ_T0054133.1 MGP_LPJ_G0025563.1 mouse_genomes_project 2 31615377 31629566 + Angptl2 protein_coding retained_intron MGP_LPJ_T0054134.1 MGP_LPJ_G0025563.1 mouse_genomes_project 2 31615396 31641926 + MGP_LPJ_P0054134 Angptl2 protein_coding protein_coding MGP_LPJ_T0011524.1 MGP_LPJ_G0009642.1 mouse_genomes_project 2 117055225 117055543 + Gm25103 misc_RNA misc_RNA MGP_LPJ_T0007186.1 MGP_LPJ_G0005895.1 mouse_genomes_project 2 31917651 31931453 + Gm13530 lincRNA lincRNA MGP_LPJ_T0007292.1 MGP_LPJ_G0005981.1 mouse_genomes_project 2 105313932 105318082 - Gm13869 lincRNA lincRNA MGP_LPJ_T0017870.1 MGP_LPJ_G0015412.1 mouse_genomes_project 2 181129015 181131584 - Gm14617 processed_transcript retained_intron MGP_LPJ_T0017871.1 MGP_LPJ_G0015412.1 mouse_genomes_project 2 181129142 181135311 - Gm14617 processed_transcript lincRNA MGP_LPJ_T0017872.1 MGP_LPJ_G0015412.1 mouse_genomes_project 2 181131006 181135188 - Gm14617 processed_transcript lincRNA MGP_LPJ_T0102019.1 MGP_LPJ_G0040056.1 mouse_genomes_project 2 38070577 38076864 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0059007.1 MGP_LPJ_G0026797.1 mouse_genomes_project 2 170186738 170191386 - MGP_LPJ_P0059007 Wfdc16 protein_coding protein_coding MGP_LPJ_T0056435.1 MGP_LPJ_G0026171.1 mouse_genomes_project 2 108254414 108312480 + MGP_LPJ_P0056435 Immp1l protein_coding protein_coding MGP_LPJ_T0055005.1 MGP_LPJ_G0025737.1 mouse_genomes_project 2 69630480 69636567 + MGP_LPJ_P0055005 Phospho2 protein_coding protein_coding MGP_LPJ_T0055006.1 MGP_LPJ_G0025737.1 mouse_genomes_project 2 69630493 69638137 + MGP_LPJ_P0055006 Phospho2 protein_coding protein_coding MGP_LPJ_T0055007.1 MGP_LPJ_G0025737.1 mouse_genomes_project 2 69630507 69638137 + MGP_LPJ_P0055007 Phospho2 protein_coding protein_coding MGP_LPJ_T0055008.1 MGP_LPJ_G0025737.1 mouse_genomes_project 2 69630517 69633378 + Phospho2 protein_coding processed_transcript MGP_LPJ_T0055009.1 MGP_LPJ_G0025737.1 mouse_genomes_project 2 69630569 69657269 + Phospho2 protein_coding processed_transcript MGP_LPJ_T0055010.1 MGP_LPJ_G0025737.1 mouse_genomes_project 2 69631878 69638136 + MGP_LPJ_P0055010 Phospho2 protein_coding protein_coding MGP_LPJ_T0057363.1 MGP_LPJ_G0026398.1 mouse_genomes_project 2 130956412 130964734 - MGP_LPJ_P0057363 Fahd2a protein_coding protein_coding MGP_LPJ_T0057364.1 MGP_LPJ_G0026398.1 mouse_genomes_project 2 130956413 130964749 - Fahd2a protein_coding retained_intron MGP_LPJ_T0057365.1 MGP_LPJ_G0026398.1 mouse_genomes_project 2 130956468 130958517 - Fahd2a protein_coding processed_transcript MGP_LPJ_T0057366.1 MGP_LPJ_G0026398.1 mouse_genomes_project 2 130957034 130964741 - Fahd2a protein_coding processed_transcript MGP_LPJ_T0057367.1 MGP_LPJ_G0026398.1 mouse_genomes_project 2 130958319 130964664 - Fahd2a protein_coding processed_transcript MGP_LPJ_T0057368.1 MGP_LPJ_G0026398.1 mouse_genomes_project 2 130958608 130964700 - Fahd2a protein_coding retained_intron MGP_LPJ_T0057369.1 MGP_LPJ_G0026398.1 mouse_genomes_project 2 130960628 130964692 - Fahd2a protein_coding processed_transcript MGP_LPJ_T0052629.1 MGP_LPJ_G0025311.1 mouse_genomes_project 2 16777902 16868486 + MGP_LPJ_P0052629 Armc3 protein_coding protein_coding MGP_LPJ_T0052630.1 MGP_LPJ_G0025311.1 mouse_genomes_project 2 16777902 16868486 + MGP_LPJ_P0052630 Armc3 protein_coding protein_coding MGP_LPJ_T0053369.1 MGP_LPJ_G0025446.1 mouse_genomes_project 2 25452999 25458928 + Wdr5 protein_coding processed_transcript MGP_LPJ_T0053370.1 MGP_LPJ_G0025446.1 mouse_genomes_project 2 25452999 25474829 + MGP_LPJ_P0053370 Wdr5 protein_coding protein_coding MGP_LPJ_T0053371.1 MGP_LPJ_G0025446.1 mouse_genomes_project 2 25458035 25473337 + MGP_LPJ_P0053371 Wdr5 protein_coding protein_coding MGP_LPJ_T0053372.1 MGP_LPJ_G0025446.1 mouse_genomes_project 2 25466640 25471649 + Wdr5 protein_coding processed_transcript MGP_LPJ_T0001079.1 MGP_LPJ_G0001004.1 mouse_genomes_project 2 12111852 12113261 + TEC TEC MGP_LPJ_T0055245.1 MGP_LPJ_G0025784.1 mouse_genomes_project 2 74890134 74907019 + Hoxd4 protein_coding processed_transcript MGP_LPJ_T0055246.1 MGP_LPJ_G0025784.1 mouse_genomes_project 2 74900129 74907311 + MGP_LPJ_P0055246 Hoxd4 protein_coding protein_coding MGP_LPJ_T0055248.1 MGP_LPJ_G0025784.1 mouse_genomes_project 2 74905224 74907274 + MGP_LPJ_P0055248 Hoxd4 protein_coding protein_coding MGP_LPJ_T0057518.1 MGP_LPJ_G0026438.1 mouse_genomes_project 2 134101388 134108532 - MGP_LPJ_P0057518 Cpxm1 protein_coding protein_coding MGP_LPJ_T0057519.1 MGP_LPJ_G0026438.1 mouse_genomes_project 2 134101389 134104238 - Cpxm1 protein_coding retained_intron MGP_LPJ_T0055239.1 MGP_LPJ_G0025780.1 mouse_genomes_project 2 74870260 74873414 + MGP_LPJ_P0055239 Hoxd10 protein_coding protein_coding MGP_LPJ_T0017868.1 MGP_LPJ_G0015410.1 mouse_genomes_project 2 178530066 178544863 - Gm14455 processed_transcript processed_transcript MGP_LPJ_T0010369.1 MGP_LPJ_G0008487.1 mouse_genomes_project 2 7779438 7779511 + Mir466 miRNA miRNA MGP_LPJ_T0055412.1 MGP_LPJ_G0025818.1 mouse_genomes_project 2 81069848 81086494 + MGP_LPJ_P0055412 Dusp19 protein_coding protein_coding MGP_LPJ_T0055413.1 MGP_LPJ_G0025818.1 mouse_genomes_project 2 81069903 81086563 + Dusp19 protein_coding processed_transcript MGP_LPJ_T0055414.1 MGP_LPJ_G0025818.1 mouse_genomes_project 2 81070029 81085657 + Dusp19 protein_coding processed_transcript MGP_LPJ_T0055415.1 MGP_LPJ_G0025818.1 mouse_genomes_project 2 81070034 81077073 + Dusp19 protein_coding processed_transcript MGP_LPJ_T0055417.1 MGP_LPJ_G0025818.1 mouse_genomes_project 2 81070069 81087201 + Dusp19 protein_coding processed_transcript MGP_LPJ_T0054422.1 MGP_LPJ_G0025634.1 mouse_genomes_project 2 37226022 37288162 - MGP_LPJ_P0054422 Psmb7 protein_coding protein_coding MGP_LPJ_T0054423.1 MGP_LPJ_G0025634.1 mouse_genomes_project 2 37251168 37287995 - Psmb7 protein_coding retained_intron MGP_LPJ_T0010488.1 MGP_LPJ_G0008606.1 mouse_genomes_project 2 157604418 157604478 + Mir5622 miRNA miRNA MGP_LPJ_T0054846.1 MGP_LPJ_G0025704.1 mouse_genomes_project 2 62191377 62221847 + MGP_LPJ_P0054846 Gca protein_coding protein_coding MGP_LPJ_T0054847.1 MGP_LPJ_G0025704.1 mouse_genomes_project 2 62212395 62218267 + Gca protein_coding processed_transcript MGP_LPJ_T0053579.1 MGP_LPJ_G0025481.1 mouse_genomes_project 2 28139800 28159210 - MGP_LPJ_P0053579 Wdr34 protein_coding protein_coding MGP_LPJ_T0053580.1 MGP_LPJ_G0025481.1 mouse_genomes_project 2 28140166 28140760 - Wdr34 protein_coding retained_intron MGP_LPJ_T0053581.1 MGP_LPJ_G0025481.1 mouse_genomes_project 2 28142048 28143293 - Wdr34 protein_coding retained_intron MGP_LPJ_T0053582.1 MGP_LPJ_G0025481.1 mouse_genomes_project 2 28157507 28159190 - Wdr34 protein_coding processed_transcript MGP_LPJ_T0013380.1 MGP_LPJ_G0011471.1 mouse_genomes_project 2 2694343 2694965 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013546.1 MGP_LPJ_G0011637.1 mouse_genomes_project 2 66645653 66646146 + processed_pseudogene processed_pseudogene MGP_LPJ_T0055680.1 MGP_LPJ_G0025955.1 mouse_genomes_project 2 88755577 88756504 - MGP_LPJ_P0055680 Olfr1132 protein_coding protein_coding MGP_LPJ_T0059606.1 MGP_LPJ_G0026939.1 mouse_genomes_project 2 187550243 187565592 + MGP_LPJ_P0059606 Arfgap1 protein_coding protein_coding MGP_LPJ_T0059607.1 MGP_LPJ_G0026939.1 mouse_genomes_project 2 187550252 187565660 + MGP_LPJ_P0059607 Arfgap1 protein_coding protein_coding MGP_LPJ_T0059608.1 MGP_LPJ_G0026939.1 mouse_genomes_project 2 187550263 187564834 + MGP_LPJ_P0059608 Arfgap1 protein_coding protein_coding MGP_LPJ_T0059609.1 MGP_LPJ_G0026939.1 mouse_genomes_project 2 187550283 187565594 + Arfgap1 protein_coding retained_intron MGP_LPJ_T0059610.1 MGP_LPJ_G0026939.1 mouse_genomes_project 2 187550285 187565580 + Arfgap1 protein_coding processed_transcript MGP_LPJ_T0059611.1 MGP_LPJ_G0026939.1 mouse_genomes_project 2 187550295 187565594 + MGP_LPJ_P0059611 Arfgap1 protein_coding protein_coding MGP_LPJ_T0059612.1 MGP_LPJ_G0026939.1 mouse_genomes_project 2 187550297 187556039 + Arfgap1 protein_coding retained_intron MGP_LPJ_T0059613.1 MGP_LPJ_G0026939.1 mouse_genomes_project 2 187550318 187565445 + MGP_LPJ_P0059613 Arfgap1 protein_coding protein_coding MGP_LPJ_T0059614.1 MGP_LPJ_G0026939.1 mouse_genomes_project 2 187554149 187564607 + MGP_LPJ_P0059614 Arfgap1 protein_coding protein_coding MGP_LPJ_T0059615.1 MGP_LPJ_G0026939.1 mouse_genomes_project 2 187554164 187564504 + MGP_LPJ_P0059615 Arfgap1 protein_coding protein_coding MGP_LPJ_T0059616.1 MGP_LPJ_G0026939.1 mouse_genomes_project 2 187556595 187559888 + Arfgap1 protein_coding retained_intron MGP_LPJ_T0059617.1 MGP_LPJ_G0026939.1 mouse_genomes_project 2 187556612 187561176 + Arfgap1 protein_coding retained_intron MGP_LPJ_T0059618.1 MGP_LPJ_G0026939.1 mouse_genomes_project 2 187556940 187560660 + Arfgap1 protein_coding retained_intron MGP_LPJ_T0059619.1 MGP_LPJ_G0026939.1 mouse_genomes_project 2 187563482 187564531 + Arfgap1 protein_coding processed_transcript MGP_LPJ_T0102060.1 MGP_LPJ_G0040097.1 mouse_genomes_project 2 91864896 91893913 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0056276.1 MGP_LPJ_G0026141.1 mouse_genomes_project 2 105371859 105413142 - MGP_LPJ_P0056276 Ehf protein_coding protein_coding MGP_LPJ_T0056277.1 MGP_LPJ_G0026141.1 mouse_genomes_project 2 105372451 105413030 - MGP_LPJ_P0056277 Ehf protein_coding protein_coding MGP_LPJ_T0056278.1 MGP_LPJ_G0026141.1 mouse_genomes_project 2 105374951 105393656 - MGP_LPJ_P0056278 Ehf protein_coding protein_coding MGP_LPJ_T0056279.1 MGP_LPJ_G0026141.1 mouse_genomes_project 2 105375148 105382699 - Ehf protein_coding retained_intron MGP_LPJ_T0056280.1 MGP_LPJ_G0026141.1 mouse_genomes_project 2 105375516 105409429 - MGP_LPJ_P0056280 Ehf protein_coding protein_coding MGP_LPJ_T0056281.1 MGP_LPJ_G0026141.1 mouse_genomes_project 2 105382550 105400846 - MGP_LPJ_P0056281 Ehf protein_coding protein_coding MGP_LPJ_T0056282.1 MGP_LPJ_G0026141.1 mouse_genomes_project 2 105385243 105412784 - MGP_LPJ_P0056282 Ehf protein_coding protein_coding MGP_LPJ_T0056283.1 MGP_LPJ_G0026141.1 mouse_genomes_project 2 105387564 105413031 - Ehf protein_coding retained_intron MGP_LPJ_T0053080.1 MGP_LPJ_G0025390.1 mouse_genomes_project 2 23450195 23458951 - MGP_LPJ_P0053080 Ccdc183 protein_coding protein_coding MGP_LPJ_T0053081.1 MGP_LPJ_G0025390.1 mouse_genomes_project 2 23450253 23458932 - Ccdc183 protein_coding processed_transcript MGP_LPJ_T0004016.1 MGP_LPJ_G0003579.1 mouse_genomes_project 2 72289474 72297091 - Rapgef4os2 antisense antisense MGP_LPJ_T0003919.1 MGP_LPJ_G0003506.1 mouse_genomes_project 2 16987782 16990662 - Gm13344 antisense antisense MGP_LPJ_T0057744.1 MGP_LPJ_G0026486.1 mouse_genomes_project 2 136728012 136740569 - MGP_LPJ_P0057744 Lrrn4 protein_coding protein_coding MGP_LPJ_T0055597.1 MGP_LPJ_G0025882.1 mouse_genomes_project 2 86694994 86695933 + MGP_LPJ_P0055597 Olfr1025-ps1 protein_coding protein_coding MGP_LPJ_T0055598.1 MGP_LPJ_G0025882.1 mouse_genomes_project 2 86694994 86695915 + MGP_LPJ_P0055598 Olfr1025-ps1 protein_coding protein_coding MGP_LPJ_T0007374.1 MGP_LPJ_G0006047.1 mouse_genomes_project 2 155837018 155843615 + lincRNA lincRNA MGP_LPJ_T0054460.1 MGP_LPJ_G0025642.1 mouse_genomes_project 2 37744651 37873082 - MGP_LPJ_P0054460 Scai protein_coding protein_coding MGP_LPJ_T0054461.1 MGP_LPJ_G0025642.1 mouse_genomes_project 2 37753202 37873053 - MGP_LPJ_P0054461 Scai protein_coding nonsense_mediated_decay MGP_LPJ_T0054462.1 MGP_LPJ_G0025642.1 mouse_genomes_project 2 37753444 37873040 - MGP_LPJ_P0054462 Scai protein_coding nonsense_mediated_decay MGP_LPJ_T0054463.1 MGP_LPJ_G0025642.1 mouse_genomes_project 2 37753509 37778193 - MGP_LPJ_P0054463 Scai protein_coding nonsense_mediated_decay MGP_LPJ_T0054464.1 MGP_LPJ_G0025642.1 mouse_genomes_project 2 37758859 37873078 - MGP_LPJ_P0054464 Scai protein_coding nonsense_mediated_decay MGP_LPJ_T0054465.1 MGP_LPJ_G0025642.1 mouse_genomes_project 2 37780209 37873082 - Scai protein_coding retained_intron MGP_LPJ_T0054466.1 MGP_LPJ_G0025642.1 mouse_genomes_project 2 37782278 37873078 - Scai protein_coding retained_intron MGP_LPJ_T0054467.1 MGP_LPJ_G0025642.1 mouse_genomes_project 2 37785505 37787560 - Scai protein_coding retained_intron MGP_LPJ_T0054468.1 MGP_LPJ_G0025642.1 mouse_genomes_project 2 37785654 37800371 - Scai protein_coding retained_intron MGP_LPJ_T0056446.1 MGP_LPJ_G0026174.1 mouse_genomes_project 2 109377964 109390997 - MGP_LPJ_P0056446 Arl14ep protein_coding protein_coding MGP_LPJ_T0056447.1 MGP_LPJ_G0026174.1 mouse_genomes_project 2 109379914 109385983 - MGP_LPJ_P0056447 Arl14ep protein_coding protein_coding MGP_LPJ_T0056448.1 MGP_LPJ_G0026174.1 mouse_genomes_project 2 109380676 109384869 - Arl14ep protein_coding retained_intron MGP_LPJ_T0056449.1 MGP_LPJ_G0026174.1 mouse_genomes_project 2 109382999 109390970 - Arl14ep protein_coding retained_intron MGP_LPJ_T0055697.1 MGP_LPJ_G0025970.1 mouse_genomes_project 2 89031488 89032445 + MGP_LPJ_P0055697 Olfr1153 protein_coding protein_coding MGP_LPJ_T0052967.1 MGP_LPJ_G0025372.1 mouse_genomes_project 2 23180939 23186733 - MGP_LPJ_P0052967 Uap1l1 protein_coding protein_coding MGP_LPJ_T0052968.1 MGP_LPJ_G0025372.1 mouse_genomes_project 2 23182539 23183781 - Uap1l1 protein_coding processed_transcript MGP_LPJ_T0052969.1 MGP_LPJ_G0025372.1 mouse_genomes_project 2 23182540 23184749 - Uap1l1 protein_coding processed_transcript MGP_LPJ_T0052970.1 MGP_LPJ_G0025372.1 mouse_genomes_project 2 23182544 23185179 - Uap1l1 protein_coding processed_transcript MGP_LPJ_T0052971.1 MGP_LPJ_G0025372.1 mouse_genomes_project 2 23184393 23185708 - Uap1l1 protein_coding processed_transcript MGP_LPJ_T0052972.1 MGP_LPJ_G0025372.1 mouse_genomes_project 2 23185168 23186666 - Uap1l1 protein_coding processed_transcript MGP_LPJ_T0058357.1 MGP_LPJ_G0026657.1 mouse_genomes_project 2 159461347 159480533 - MGP_LPJ_P0058357 Pxmp4 protein_coding protein_coding MGP_LPJ_T0058358.1 MGP_LPJ_G0026657.1 mouse_genomes_project 2 159471774 159480513 - MGP_LPJ_P0058358 Pxmp4 protein_coding protein_coding MGP_LPJ_T0057898.1 MGP_LPJ_G0026524.1 mouse_genomes_project 2 148780813 148795672 + MGP_LPJ_P0057898 Polr3f protein_coding protein_coding MGP_LPJ_T0057899.1 MGP_LPJ_G0026524.1 mouse_genomes_project 2 148780837 148784774 + Polr3f protein_coding processed_transcript MGP_LPJ_T0057900.1 MGP_LPJ_G0026524.1 mouse_genomes_project 2 148780843 148789195 + MGP_LPJ_P0057900 Polr3f protein_coding protein_coding MGP_LPJ_T0057901.1 MGP_LPJ_G0026524.1 mouse_genomes_project 2 148780875 148788712 + Polr3f protein_coding processed_transcript MGP_LPJ_T0057902.1 MGP_LPJ_G0026524.1 mouse_genomes_project 2 148786378 148792478 + Polr3f protein_coding processed_transcript MGP_LPJ_T0057903.1 MGP_LPJ_G0026524.1 mouse_genomes_project 2 148789625 148790310 + Polr3f protein_coding processed_transcript MGP_LPJ_T0057904.1 MGP_LPJ_G0026524.1 mouse_genomes_project 2 148789857 148792578 + Polr3f protein_coding processed_transcript MGP_LPJ_T0007328.1 MGP_LPJ_G0006010.1 mouse_genomes_project 2 122670587 122678435 + 1700020I14Rik lincRNA lincRNA MGP_LPJ_T0007329.1 MGP_LPJ_G0006010.1 mouse_genomes_project 2 122670593 122685202 + 1700020I14Rik lincRNA lincRNA MGP_LPJ_T0057547.1 MGP_LPJ_G0026447.1 mouse_genomes_project 2 134291832 134293767 - MGP_LPJ_P0057547 Avp protein_coding protein_coding MGP_LPJ_T0013586.1 MGP_LPJ_G0011677.1 mouse_genomes_project 2 80941047 80941329 + processed_pseudogene processed_pseudogene MGP_LPJ_T0059412.1 MGP_LPJ_G0026890.1 mouse_genomes_project 2 179416779 179473601 - MGP_LPJ_P0059412 Pmepa1 protein_coding protein_coding MGP_LPJ_T0059413.1 MGP_LPJ_G0026890.1 mouse_genomes_project 2 179420373 179473257 - MGP_LPJ_P0059413 Pmepa1 protein_coding protein_coding MGP_LPJ_T0059414.1 MGP_LPJ_G0026890.1 mouse_genomes_project 2 179420538 179427046 - Pmepa1 protein_coding retained_intron MGP_LPJ_T0053482.1 MGP_LPJ_G0025470.1 mouse_genomes_project 2 27403435 27589269 + MGP_LPJ_P0053482 Med27 protein_coding protein_coding MGP_LPJ_T0053483.1 MGP_LPJ_G0025470.1 mouse_genomes_project 2 27403449 27539113 + MGP_LPJ_P0053483 Med27 protein_coding protein_coding MGP_LPJ_T0053484.1 MGP_LPJ_G0025470.1 mouse_genomes_project 2 27434524 27573926 + MGP_LPJ_P0053484 Med27 protein_coding protein_coding MGP_LPJ_T0053485.1 MGP_LPJ_G0025470.1 mouse_genomes_project 2 27434524 27560966 + MGP_LPJ_P0053485 Med27 protein_coding protein_coding MGP_LPJ_T0053486.1 MGP_LPJ_G0025470.1 mouse_genomes_project 2 27435198 27560863 + MGP_LPJ_P0053486 Med27 protein_coding protein_coding MGP_LPJ_T0053487.1 MGP_LPJ_G0025470.1 mouse_genomes_project 2 27435217 27589031 + MGP_LPJ_P0053487 Med27 protein_coding protein_coding MGP_LPJ_T0053488.1 MGP_LPJ_G0025470.1 mouse_genomes_project 2 27435289 27538305 + MGP_LPJ_P0053488 Med27 protein_coding protein_coding MGP_LPJ_T0053489.1 MGP_LPJ_G0025470.1 mouse_genomes_project 2 27448622 27587327 + Med27 protein_coding processed_transcript MGP_LPJ_T0053490.1 MGP_LPJ_G0025470.1 mouse_genomes_project 2 27557176 27561188 + Med27 protein_coding retained_intron MGP_LPJ_T0053491.1 MGP_LPJ_G0025470.1 mouse_genomes_project 2 27567826 27589157 + Med27 protein_coding processed_transcript MGP_LPJ_T0101312.1 MGP_LPJ_G0039532.1 mouse_genomes_project 2 154877732 154878412 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101313.1 MGP_LPJ_G0039532.1 mouse_genomes_project 2 154877965 154878721 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0102063.1 MGP_LPJ_G0040100.1 mouse_genomes_project 2 111991121 112013526 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0058029.1 MGP_LPJ_G0026562.1 mouse_genomes_project 2 154631932 154668367 - MGP_LPJ_P0058029 Zfp120 protein_coding nonsense_mediated_decay MGP_LPJ_T0058030.1 MGP_LPJ_G0026562.1 mouse_genomes_project 2 154631932 154668397 - MGP_LPJ_P0058030 Zfp120 protein_coding protein_coding MGP_LPJ_T0058031.1 MGP_LPJ_G0026562.1 mouse_genomes_project 2 154631932 154668367 - MGP_LPJ_P0058031 Zfp120 protein_coding protein_coding MGP_LPJ_T0058032.1 MGP_LPJ_G0026562.1 mouse_genomes_project 2 154643627 154668345 - Zfp120 protein_coding processed_transcript MGP_LPJ_T0017738.1 MGP_LPJ_G0015348.1 mouse_genomes_project 2 76003305 76010046 + Gm13657 processed_transcript processed_transcript MGP_LPJ_T0007320.1 MGP_LPJ_G0006003.1 mouse_genomes_project 2 119912493 119916356 - Gm29340 lincRNA lincRNA MGP_LPJ_T0017757.1 MGP_LPJ_G0015361.1 mouse_genomes_project 2 94698967 94705306 + 4631405J19Rik processed_transcript processed_transcript MGP_LPJ_T0017758.1 MGP_LPJ_G0015361.1 mouse_genomes_project 2 94698967 94705306 + 4631405J19Rik processed_transcript processed_transcript MGP_LPJ_T0017759.1 MGP_LPJ_G0015361.1 mouse_genomes_project 2 94700359 94705333 + 4631405J19Rik processed_transcript processed_transcript MGP_LPJ_T0017760.1 MGP_LPJ_G0015361.1 mouse_genomes_project 2 94700360 94703603 + 4631405J19Rik processed_transcript processed_transcript MGP_LPJ_T0017761.1 MGP_LPJ_G0015361.1 mouse_genomes_project 2 94701455 94717966 + 4631405J19Rik processed_transcript processed_transcript MGP_LPJ_T0004118.1 MGP_LPJ_G0003646.1 mouse_genomes_project 2 139056118 139102199 - 4930545L23Rik antisense antisense MGP_LPJ_T0007257.1 MGP_LPJ_G0005954.1 mouse_genomes_project 2 77630606 77632877 + Gm13943 lincRNA lincRNA MGP_LPJ_T0013739.1 MGP_LPJ_G0011830.1 mouse_genomes_project 2 143426509 143427018 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007255.1 MGP_LPJ_G0005952.1 mouse_genomes_project 2 75667301 75673126 - Gm13660 lincRNA lincRNA MGP_LPJ_T0058783.1 MGP_LPJ_G0026732.1 mouse_genomes_project 2 163787862 163792844 + MGP_LPJ_P0058783 Slc32a1 protein_coding protein_coding MGP_LPJ_T0054675.1 MGP_LPJ_G0025677.1 mouse_genomes_project 2 57452527 57460322 - MGP_LPJ_P0054675 Ermn protein_coding protein_coding MGP_LPJ_T0013485.1 MGP_LPJ_G0011576.1 mouse_genomes_project 2 45342965 45343315 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007256.1 MGP_LPJ_G0005953.1 mouse_genomes_project 2 75949350 75949929 - Gm13656 lincRNA lincRNA MGP_LPJ_T0013752.1 MGP_LPJ_G0011843.1 mouse_genomes_project 2 148097679 148098010 + processed_pseudogene processed_pseudogene MGP_LPJ_T0058468.1 MGP_LPJ_G0026681.1 mouse_genomes_project 2 160804365 160806069 - MGP_LPJ_P0058468 BC029722 protein_coding protein_coding MGP_LPJ_T0013559.1 MGP_LPJ_G0011650.1 mouse_genomes_project 2 72651354 72651696 - processed_pseudogene processed_pseudogene MGP_LPJ_T0056041.1 MGP_LPJ_G0026099.1 mouse_genomes_project 2 93514251 93552572 - MGP_LPJ_P0056041 Dgkz protein_coding nonsense_mediated_decay MGP_LPJ_T0056042.1 MGP_LPJ_G0026099.1 mouse_genomes_project 2 93514251 93563736 - MGP_LPJ_P0056042 Dgkz protein_coding protein_coding MGP_LPJ_T0056043.1 MGP_LPJ_G0026099.1 mouse_genomes_project 2 93514253 93550648 - MGP_LPJ_P0056043 Dgkz protein_coding protein_coding MGP_LPJ_T0056044.1 MGP_LPJ_G0026099.1 mouse_genomes_project 2 93514254 93552585 - MGP_LPJ_P0056044 Dgkz protein_coding nonsense_mediated_decay MGP_LPJ_T0056045.1 MGP_LPJ_G0026099.1 mouse_genomes_project 2 93514254 93531877 - MGP_LPJ_P0056045 Dgkz protein_coding protein_coding MGP_LPJ_T0056046.1 MGP_LPJ_G0026099.1 mouse_genomes_project 2 93514663 93515360 - Dgkz protein_coding retained_intron MGP_LPJ_T0056047.1 MGP_LPJ_G0026099.1 mouse_genomes_project 2 93514811 93516009 - Dgkz protein_coding retained_intron MGP_LPJ_T0056048.1 MGP_LPJ_G0026099.1 mouse_genomes_project 2 93514869 93516927 - Dgkz protein_coding retained_intron MGP_LPJ_T0056049.1 MGP_LPJ_G0026099.1 mouse_genomes_project 2 93514882 93515939 - Dgkz protein_coding retained_intron MGP_LPJ_T0056050.1 MGP_LPJ_G0026099.1 mouse_genomes_project 2 93515208 93517028 - Dgkz protein_coding retained_intron MGP_LPJ_T0056051.1 MGP_LPJ_G0026099.1 mouse_genomes_project 2 93517334 93519452 - Dgkz protein_coding processed_transcript MGP_LPJ_T0056052.1 MGP_LPJ_G0026099.1 mouse_genomes_project 2 93522181 93531761 - MGP_LPJ_P0056052 Dgkz protein_coding nonsense_mediated_decay MGP_LPJ_T0056053.1 MGP_LPJ_G0026099.1 mouse_genomes_project 2 93522432 93526695 - Dgkz protein_coding processed_transcript MGP_LPJ_T0013418.1 MGP_LPJ_G0011509.1 mouse_genomes_project 2 17548669 17550100 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013597.1 MGP_LPJ_G0011688.1 mouse_genomes_project 2 83934445 83935147 + processed_pseudogene processed_pseudogene MGP_LPJ_T0057508.1 MGP_LPJ_G0026436.1 mouse_genomes_project 2 133992536 133997828 - MGP_LPJ_P0057508 Idh3b protein_coding protein_coding MGP_LPJ_T0057509.1 MGP_LPJ_G0026436.1 mouse_genomes_project 2 133992540 133993779 - MGP_LPJ_P0057509 Idh3b protein_coding nonsense_mediated_decay MGP_LPJ_T0057510.1 MGP_LPJ_G0026436.1 mouse_genomes_project 2 133995372 133997715 - Idh3b protein_coding retained_intron MGP_LPJ_T0057511.1 MGP_LPJ_G0026436.1 mouse_genomes_project 2 133996943 133997696 - Idh3b protein_coding retained_intron MGP_LPJ_T0007264.1 MGP_LPJ_G0005959.1 mouse_genomes_project 2 82936045 82953833 - A130030D18Rik lincRNA lincRNA MGP_LPJ_T0013589.1 MGP_LPJ_G0011680.1 mouse_genomes_project 2 81344937 81346065 - processed_pseudogene processed_pseudogene MGP_LPJ_T0056567.1 MGP_LPJ_G0026232.1 mouse_genomes_project 2 116094638 116500125 + MGP_LPJ_P0056567 Fmn1 protein_coding protein_coding MGP_LPJ_T0056568.1 MGP_LPJ_G0026232.1 mouse_genomes_project 2 116094673 116273508 + Fmn1 protein_coding processed_transcript MGP_LPJ_T0056569.1 MGP_LPJ_G0026232.1 mouse_genomes_project 2 116094684 116493213 + MGP_LPJ_P0056569 Fmn1 protein_coding protein_coding MGP_LPJ_T0056570.1 MGP_LPJ_G0026232.1 mouse_genomes_project 2 116133849 116492964 + MGP_LPJ_P0056570 Fmn1 protein_coding protein_coding MGP_LPJ_T0056571.1 MGP_LPJ_G0026232.1 mouse_genomes_project 2 116217342 116493213 + MGP_LPJ_P0056571 Fmn1 protein_coding protein_coding MGP_LPJ_T0056572.1 MGP_LPJ_G0026232.1 mouse_genomes_project 2 116468481 116476556 + Fmn1 protein_coding processed_transcript MGP_LPJ_T0056573.1 MGP_LPJ_G0026232.1 mouse_genomes_project 2 116468496 116493092 + Fmn1 protein_coding processed_transcript MGP_LPJ_T0056574.1 MGP_LPJ_G0026232.1 mouse_genomes_project 2 116468496 116493210 + Fmn1 protein_coding processed_transcript MGP_LPJ_T0056575.1 MGP_LPJ_G0026232.1 mouse_genomes_project 2 116492028 116493088 + Fmn1 protein_coding processed_transcript MGP_LPJ_T0056143.1 MGP_LPJ_G0026115.1 mouse_genomes_project 2 95263996 95266479 + MGP_LPJ_P0056143 Gm10803 protein_coding protein_coding MGP_LPJ_T0010385.1 MGP_LPJ_G0008503.1 mouse_genomes_project 2 7786674 7786770 + Mir669o miRNA miRNA MGP_LPJ_T0058420.1 MGP_LPJ_G0026672.1 mouse_genomes_project 2 160461918 160486594 - MGP_LPJ_P0058420 Ggt7 protein_coding protein_coding MGP_LPJ_T0058421.1 MGP_LPJ_G0026672.1 mouse_genomes_project 2 160466500 160470934 - Ggt7 protein_coding retained_intron MGP_LPJ_T0058422.1 MGP_LPJ_G0026672.1 mouse_genomes_project 2 160467569 160474912 - Ggt7 protein_coding retained_intron MGP_LPJ_T0058423.1 MGP_LPJ_G0026672.1 mouse_genomes_project 2 160472534 160478718 - MGP_LPJ_P0058423 Ggt7 protein_coding protein_coding MGP_LPJ_T0058424.1 MGP_LPJ_G0026672.1 mouse_genomes_project 2 160476538 160489916 - MGP_LPJ_P0058424 Ggt7 protein_coding protein_coding MGP_LPJ_T0058111.1 MGP_LPJ_G0026580.1 mouse_genomes_project 2 156366402 156371751 + MGP_LPJ_P0058111 Tmem74b protein_coding protein_coding MGP_LPJ_T0058112.1 MGP_LPJ_G0026580.1 mouse_genomes_project 2 156366705 156376705 + MGP_LPJ_P0058112 Tmem74b protein_coding protein_coding MGP_LPJ_T0056527.1 MGP_LPJ_G0026214.1 mouse_genomes_project 2 114659906 114660845 - MGP_LPJ_P0056527 protein_coding protein_coding MGP_LPJ_T0059340.1 MGP_LPJ_G0026866.1 mouse_genomes_project 2 175587079 175891198 + MGP_LPJ_P0059340 Tshz2 protein_coding protein_coding MGP_LPJ_T0059341.1 MGP_LPJ_G0026866.1 mouse_genomes_project 2 175587736 175864189 + MGP_LPJ_P0059341 Tshz2 protein_coding protein_coding MGP_LPJ_T0059342.1 MGP_LPJ_G0026866.1 mouse_genomes_project 2 175860571 176058378 + MGP_LPJ_P0059342 Tshz2 protein_coding protein_coding MGP_LPJ_T0059343.1 MGP_LPJ_G0026866.1 mouse_genomes_project 2 175860571 176058378 + MGP_LPJ_P0059343 Tshz2 protein_coding protein_coding MGP_LPJ_T0059344.1 MGP_LPJ_G0026866.1 mouse_genomes_project 2 175861519 175891198 + MGP_LPJ_P0059344 Tshz2 protein_coding protein_coding MGP_LPJ_T0010372.1 MGP_LPJ_G0008490.1 mouse_genomes_project 2 7781100 7781222 + miRNA miRNA MGP_LPJ_T0052526.1 MGP_LPJ_G0025294.1 mouse_genomes_project 2 12037946 12040674 + Cacnb2 protein_coding retained_intron MGP_LPJ_T0052527.1 MGP_LPJ_G0025294.1 mouse_genomes_project 2 12040366 12439560 + MGP_LPJ_P0052527 Cacnb2 protein_coding protein_coding MGP_LPJ_T0052528.1 MGP_LPJ_G0025294.1 mouse_genomes_project 2 12041182 12409626 + Cacnb2 protein_coding retained_intron MGP_LPJ_T0052529.1 MGP_LPJ_G0025294.1 mouse_genomes_project 2 12175863 12439559 + Cacnb2 protein_coding processed_transcript MGP_LPJ_T0052530.1 MGP_LPJ_G0025294.1 mouse_genomes_project 2 12201849 12410460 + Cacnb2 protein_coding retained_intron MGP_LPJ_T0052531.1 MGP_LPJ_G0025294.1 mouse_genomes_project 2 12265880 12420917 + Cacnb2 protein_coding retained_intron MGP_LPJ_T0052532.1 MGP_LPJ_G0025294.1 mouse_genomes_project 2 12265946 12435902 + MGP_LPJ_P0052532 Cacnb2 protein_coding protein_coding MGP_LPJ_T0052533.1 MGP_LPJ_G0025294.1 mouse_genomes_project 2 12319257 12420832 + Cacnb2 protein_coding retained_intron MGP_LPJ_T0052534.1 MGP_LPJ_G0025294.1 mouse_genomes_project 2 12319258 12420917 + Cacnb2 protein_coding retained_intron MGP_LPJ_T0052535.1 MGP_LPJ_G0025294.1 mouse_genomes_project 2 12319271 12435840 + MGP_LPJ_P0052535 Cacnb2 protein_coding protein_coding MGP_LPJ_T0052536.1 MGP_LPJ_G0025294.1 mouse_genomes_project 2 12319593 12412436 + Cacnb2 protein_coding retained_intron MGP_LPJ_T0052537.1 MGP_LPJ_G0025294.1 mouse_genomes_project 2 12320023 12345750 + MGP_LPJ_P0052537 Cacnb2 protein_coding protein_coding MGP_LPJ_T0052538.1 MGP_LPJ_G0025294.1 mouse_genomes_project 2 12320350 12414188 + Cacnb2 protein_coding retained_intron MGP_LPJ_T0052539.1 MGP_LPJ_G0025294.1 mouse_genomes_project 2 12320354 12438748 + Cacnb2 protein_coding retained_intron MGP_LPJ_T0052540.1 MGP_LPJ_G0025294.1 mouse_genomes_project 2 12409544 12431148 + MGP_LPJ_P0052540 Cacnb2 protein_coding protein_coding MGP_LPJ_T0052541.1 MGP_LPJ_G0025294.1 mouse_genomes_project 2 12431842 12434144 + Cacnb2 protein_coding retained_intron MGP_LPJ_T0056509.1 MGP_LPJ_G0026196.1 mouse_genomes_project 2 113886820 113889015 + MGP_LPJ_P0056509 Olfr1283 protein_coding protein_coding MGP_LPJ_T0010423.1 MGP_LPJ_G0008541.1 mouse_genomes_project 2 31030281 31030346 + miRNA miRNA MGP_LPJ_T0052244.1 MGP_LPJ_G0025248.1 mouse_genomes_project 2 2045545 2055079 + MGP_LPJ_P0052244 Ucma protein_coding protein_coding MGP_LPJ_T0052245.1 MGP_LPJ_G0025248.1 mouse_genomes_project 2 2045548 2050651 + Ucma protein_coding processed_transcript MGP_LPJ_T0052246.1 MGP_LPJ_G0025248.1 mouse_genomes_project 2 2045574 2055071 + MGP_LPJ_P0052246 Ucma protein_coding protein_coding MGP_LPJ_T0052247.1 MGP_LPJ_G0025248.1 mouse_genomes_project 2 2045604 2055076 + MGP_LPJ_P0052247 Ucma protein_coding protein_coding MGP_LPJ_T0052248.1 MGP_LPJ_G0025248.1 mouse_genomes_project 2 2045607 2054976 + MGP_LPJ_P0052248 Ucma protein_coding protein_coding MGP_LPJ_T0004153.1 MGP_LPJ_G0003674.1 mouse_genomes_project 2 160570878 160573513 + Gssos1 antisense antisense MGP_LPJ_T0098413.1 MGP_LPJ_G0036694.1 mouse_genomes_project 2 162017588 162017723 - Gm27653 scaRNA scaRNA MGP_LPJ_T0059486.1 MGP_LPJ_G0026909.1 mouse_genomes_project 2 184807798 184889639 + MGP_LPJ_P0059486 Cdh26 protein_coding protein_coding MGP_LPJ_T0059487.1 MGP_LPJ_G0026909.1 mouse_genomes_project 2 184807874 184889641 + MGP_LPJ_P0059487 Cdh26 protein_coding protein_coding MGP_LPJ_T0059491.1 MGP_LPJ_G0026909.1 mouse_genomes_project 2 184861575 184867441 + Cdh26 protein_coding retained_intron MGP_LPJ_T0058986.1 MGP_LPJ_G0026790.1 mouse_genomes_project 2 170015669 170020331 + MGP_LPJ_P0058986 Dbndd2 protein_coding protein_coding MGP_LPJ_T0058987.1 MGP_LPJ_G0026790.1 mouse_genomes_project 2 170016018 170020839 + MGP_LPJ_P0058987 Dbndd2 protein_coding protein_coding MGP_LPJ_T0058988.1 MGP_LPJ_G0026790.1 mouse_genomes_project 2 170016018 170020331 + MGP_LPJ_P0058988 Dbndd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0058989.1 MGP_LPJ_G0026790.1 mouse_genomes_project 2 170016044 170019780 + MGP_LPJ_P0058989 Dbndd2 protein_coding protein_coding MGP_LPJ_T0058990.1 MGP_LPJ_G0026790.1 mouse_genomes_project 2 170016440 170022901 + MGP_LPJ_P0058990 Dbndd2 protein_coding protein_coding MGP_LPJ_T0058991.1 MGP_LPJ_G0026790.1 mouse_genomes_project 2 170017384 170020331 + MGP_LPJ_P0058991 Dbndd2 protein_coding protein_coding MGP_LPJ_T0017706.1 MGP_LPJ_G0015327.1 mouse_genomes_project 2 28894866 28904714 - Gm14488 processed_transcript processed_transcript MGP_LPJ_T0017707.1 MGP_LPJ_G0015327.1 mouse_genomes_project 2 28894869 28899449 - Gm14488 processed_transcript retained_intron MGP_LPJ_T0013608.1 MGP_LPJ_G0011699.1 mouse_genomes_project 2 88211367 88212829 - processed_pseudogene processed_pseudogene MGP_LPJ_T0059006.1 MGP_LPJ_G0026796.1 mouse_genomes_project 2 170165222 170170320 + MGP_LPJ_P0059006 protein_coding protein_coding MGP_LPJ_T0010387.1 MGP_LPJ_G0008505.1 mouse_genomes_project 2 7787265 7787346 + Mir466h miRNA miRNA MGP_LPJ_T0056525.1 MGP_LPJ_G0026212.1 mouse_genomes_project 2 114619733 114620696 - MGP_LPJ_P0056525 Olfr1309 protein_coding protein_coding MGP_LPJ_T0052438.1 MGP_LPJ_G0025279.1 mouse_genomes_project 2 9124281 9125265 + MGP_LPJ_P0052438 Ankrd16 protein_coding protein_coding MGP_LPJ_T0052439.1 MGP_LPJ_G0025279.1 mouse_genomes_project 2 9124896 9136502 + MGP_LPJ_P0052439 Ankrd16 protein_coding protein_coding MGP_LPJ_T0052440.1 MGP_LPJ_G0025279.1 mouse_genomes_project 2 9124929 9136506 + Ankrd16 protein_coding retained_intron MGP_LPJ_T0052441.1 MGP_LPJ_G0025279.1 mouse_genomes_project 2 9124932 9136480 + Ankrd16 protein_coding retained_intron MGP_LPJ_T0052442.1 MGP_LPJ_G0025279.1 mouse_genomes_project 2 9124969 9136502 + MGP_LPJ_P0052442 Ankrd16 protein_coding nonsense_mediated_decay MGP_LPJ_T0052443.1 MGP_LPJ_G0025279.1 mouse_genomes_project 2 9124977 9127670 + Ankrd16 protein_coding retained_intron MGP_LPJ_T0052444.1 MGP_LPJ_G0025279.1 mouse_genomes_project 2 9126290 9135945 + MGP_LPJ_P0052444 Ankrd16 protein_coding nonsense_mediated_decay MGP_LPJ_T0052445.1 MGP_LPJ_G0025279.1 mouse_genomes_project 2 9129694 9136497 + Ankrd16 protein_coding retained_intron MGP_LPJ_T0052446.1 MGP_LPJ_G0025279.1 mouse_genomes_project 2 9129714 9136091 + Ankrd16 protein_coding retained_intron MGP_LPJ_T0052447.1 MGP_LPJ_G0025279.1 mouse_genomes_project 2 9130610 9136478 + Ankrd16 protein_coding retained_intron MGP_LPJ_T0052448.1 MGP_LPJ_G0025279.1 mouse_genomes_project 2 9130698 9136473 + MGP_LPJ_P0052448 Ankrd16 protein_coding nonsense_mediated_decay MGP_LPJ_T0052449.1 MGP_LPJ_G0025279.1 mouse_genomes_project 2 9132563 9136299 + Ankrd16 protein_coding retained_intron MGP_LPJ_T0013699.1 MGP_LPJ_G0011790.1 mouse_genomes_project 2 122987393 122987728 - processed_pseudogene processed_pseudogene MGP_LPJ_T0056132.1 MGP_LPJ_G0026114.1 mouse_genomes_project 2 95123924 95166775 - MGP_LPJ_P0056132 Cd82 protein_coding protein_coding MGP_LPJ_T0056133.1 MGP_LPJ_G0026114.1 mouse_genomes_project 2 95123924 95166866 - MGP_LPJ_P0056133 Cd82 protein_coding protein_coding MGP_LPJ_T0056134.1 MGP_LPJ_G0026114.1 mouse_genomes_project 2 95123929 95167310 - MGP_LPJ_P0056134 Cd82 protein_coding protein_coding MGP_LPJ_T0056135.1 MGP_LPJ_G0026114.1 mouse_genomes_project 2 95123967 95125100 - Cd82 protein_coding processed_transcript MGP_LPJ_T0056136.1 MGP_LPJ_G0026114.1 mouse_genomes_project 2 95124642 95157040 - MGP_LPJ_P0056136 Cd82 protein_coding protein_coding MGP_LPJ_T0056137.1 MGP_LPJ_G0026114.1 mouse_genomes_project 2 95125469 95166750 - MGP_LPJ_P0056137 Cd82 protein_coding protein_coding MGP_LPJ_T0056138.1 MGP_LPJ_G0026114.1 mouse_genomes_project 2 95126639 95157044 - MGP_LPJ_P0056138 Cd82 protein_coding protein_coding MGP_LPJ_T0056139.1 MGP_LPJ_G0026114.1 mouse_genomes_project 2 95126639 95166276 - MGP_LPJ_P0056139 Cd82 protein_coding protein_coding MGP_LPJ_T0056140.1 MGP_LPJ_G0026114.1 mouse_genomes_project 2 95134596 95167504 - MGP_LPJ_P0056140 Cd82 protein_coding protein_coding MGP_LPJ_T0056141.1 MGP_LPJ_G0026114.1 mouse_genomes_project 2 95137921 95166807 - Cd82 protein_coding processed_transcript MGP_LPJ_T0056142.1 MGP_LPJ_G0026114.1 mouse_genomes_project 2 95141825 95167276 - MGP_LPJ_P0056142 Cd82 protein_coding protein_coding MGP_LPJ_T0056056.1 MGP_LPJ_G0026102.1 mouse_genomes_project 2 93795058 93988558 + MGP_LPJ_P0056056 Phf21a protein_coding protein_coding MGP_LPJ_T0056057.1 MGP_LPJ_G0026102.1 mouse_genomes_project 2 93795127 93988564 + MGP_LPJ_P0056057 Phf21a protein_coding protein_coding MGP_LPJ_T0056058.1 MGP_LPJ_G0026102.1 mouse_genomes_project 2 93795220 93832138 + Phf21a protein_coding processed_transcript MGP_LPJ_T0056059.1 MGP_LPJ_G0026102.1 mouse_genomes_project 2 93795228 93987622 + MGP_LPJ_P0056059 Phf21a protein_coding protein_coding MGP_LPJ_T0056060.1 MGP_LPJ_G0026102.1 mouse_genomes_project 2 93795228 93944166 + MGP_LPJ_P0056060 Phf21a protein_coding protein_coding MGP_LPJ_T0056061.1 MGP_LPJ_G0026102.1 mouse_genomes_project 2 93795254 93832647 + Phf21a protein_coding retained_intron MGP_LPJ_T0056062.1 MGP_LPJ_G0026102.1 mouse_genomes_project 2 93795254 93839630 + MGP_LPJ_P0056062 Phf21a protein_coding protein_coding MGP_LPJ_T0056063.1 MGP_LPJ_G0026102.1 mouse_genomes_project 2 93795744 93846530 + MGP_LPJ_P0056063 Phf21a protein_coding protein_coding MGP_LPJ_T0056064.1 MGP_LPJ_G0026102.1 mouse_genomes_project 2 93798523 93839633 + MGP_LPJ_P0056064 Phf21a protein_coding protein_coding MGP_LPJ_T0056065.1 MGP_LPJ_G0026102.1 mouse_genomes_project 2 93798547 93987630 + MGP_LPJ_P0056065 Phf21a protein_coding protein_coding MGP_LPJ_T0056066.1 MGP_LPJ_G0026102.1 mouse_genomes_project 2 93799529 93839645 + MGP_LPJ_P0056066 Phf21a protein_coding protein_coding MGP_LPJ_T0056067.1 MGP_LPJ_G0026102.1 mouse_genomes_project 2 93831454 93987152 + MGP_LPJ_P0056067 Phf21a protein_coding unknown_likely_coding MGP_LPJ_T0056068.1 MGP_LPJ_G0026102.1 mouse_genomes_project 2 93839487 93991395 + MGP_LPJ_P0056068 Phf21a protein_coding protein_coding MGP_LPJ_T0056069.1 MGP_LPJ_G0026102.1 mouse_genomes_project 2 93839487 93991395 + MGP_LPJ_P0056069 Phf21a protein_coding protein_coding MGP_LPJ_T0056070.1 MGP_LPJ_G0026102.1 mouse_genomes_project 2 93839487 93991395 + MGP_LPJ_P0056070 Phf21a protein_coding protein_coding MGP_LPJ_T0056071.1 MGP_LPJ_G0026102.1 mouse_genomes_project 2 93839487 93991395 + MGP_LPJ_P0056071 Phf21a protein_coding protein_coding MGP_LPJ_T0056072.1 MGP_LPJ_G0026102.1 mouse_genomes_project 2 93839602 93991395 + MGP_LPJ_P0056072 Phf21a protein_coding protein_coding MGP_LPJ_T0056073.1 MGP_LPJ_G0026102.1 mouse_genomes_project 2 93839610 93951001 + MGP_LPJ_P0056073 Phf21a protein_coding protein_coding MGP_LPJ_T0056074.1 MGP_LPJ_G0026102.1 mouse_genomes_project 2 93846533 93987159 + MGP_LPJ_P0056074 Phf21a protein_coding protein_coding MGP_LPJ_T0056075.1 MGP_LPJ_G0026102.1 mouse_genomes_project 2 93944325 93955825 + MGP_LPJ_P0056075 Phf21a protein_coding protein_coding MGP_LPJ_T0056076.1 MGP_LPJ_G0026102.1 mouse_genomes_project 2 93955853 93985906 + MGP_LPJ_P0056076 Phf21a protein_coding protein_coding MGP_LPJ_T0056077.1 MGP_LPJ_G0026102.1 mouse_genomes_project 2 93975639 93983722 + Phf21a protein_coding retained_intron MGP_LPJ_T0102056.1 MGP_LPJ_G0040093.1 mouse_genomes_project 2 91472286 91473211 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0056206.1 MGP_LPJ_G0026126.1 mouse_genomes_project 2 98117072 99483820 + MGP_LPJ_P0056206 Lrrc4c protein_coding protein_coding MGP_LPJ_T0056207.1 MGP_LPJ_G0026126.1 mouse_genomes_project 2 98117119 99483137 + MGP_LPJ_P0056207 Lrrc4c protein_coding protein_coding MGP_LPJ_T0056208.1 MGP_LPJ_G0026126.1 mouse_genomes_project 2 99299154 99483818 + MGP_LPJ_P0056208 Lrrc4c protein_coding protein_coding MGP_LPJ_T0056209.1 MGP_LPJ_G0026126.1 mouse_genomes_project 2 99299587 99481217 + MGP_LPJ_P0056209 Lrrc4c protein_coding protein_coding MGP_LPJ_T0059578.1 MGP_LPJ_G0026932.1 mouse_genomes_project 2 187202986 187247610 - MGP_LPJ_P0059578 Dido1 protein_coding protein_coding MGP_LPJ_T0059579.1 MGP_LPJ_G0026932.1 mouse_genomes_project 2 187213339 187256980 - MGP_LPJ_P0059579 Dido1 protein_coding protein_coding MGP_LPJ_T0059580.1 MGP_LPJ_G0026932.1 mouse_genomes_project 2 187213341 187221016 - MGP_LPJ_P0059580 Dido1 protein_coding protein_coding MGP_LPJ_T0059581.1 MGP_LPJ_G0026932.1 mouse_genomes_project 2 187214264 187247610 - MGP_LPJ_P0059581 Dido1 protein_coding protein_coding MGP_LPJ_T0059582.1 MGP_LPJ_G0026932.1 mouse_genomes_project 2 187226117 187256980 - MGP_LPJ_P0059582 Dido1 protein_coding protein_coding MGP_LPJ_T0059583.1 MGP_LPJ_G0026932.1 mouse_genomes_project 2 187226132 187247610 - MGP_LPJ_P0059583 Dido1 protein_coding protein_coding MGP_LPJ_T0059584.1 MGP_LPJ_G0026932.1 mouse_genomes_project 2 187230154 187247252 - Dido1 protein_coding processed_transcript MGP_LPJ_T0055639.1 MGP_LPJ_G0025922.1 mouse_genomes_project 2 87753910 87756057 - MGP_LPJ_P0055639 protein_coding protein_coding MGP_LPJ_T0001069.1 MGP_LPJ_G0000994.1 mouse_genomes_project 2 10384654 10386267 + TEC TEC MGP_LPJ_T0011540.1 MGP_LPJ_G0009658.1 mouse_genomes_project 2 180551474 180551596 + Gm27869 misc_RNA misc_RNA MGP_LPJ_T0059350.1 MGP_LPJ_G0026868.1 mouse_genomes_project 2 176340577 176420656 - MGP_LPJ_P0059350 Bcas1 protein_coding protein_coding MGP_LPJ_T0059351.1 MGP_LPJ_G0026868.1 mouse_genomes_project 2 176340729 176413490 - MGP_LPJ_P0059351 Bcas1 protein_coding protein_coding MGP_LPJ_T0059352.1 MGP_LPJ_G0026868.1 mouse_genomes_project 2 176340730 176420656 - MGP_LPJ_P0059352 Bcas1 protein_coding protein_coding MGP_LPJ_T0059353.1 MGP_LPJ_G0026868.1 mouse_genomes_project 2 176341517 176343327 - Bcas1 protein_coding processed_transcript MGP_LPJ_T0059354.1 MGP_LPJ_G0026868.1 mouse_genomes_project 2 176341531 176350699 - Bcas1 protein_coding processed_transcript MGP_LPJ_T0059355.1 MGP_LPJ_G0026868.1 mouse_genomes_project 2 176341675 176343382 - Bcas1 protein_coding processed_transcript MGP_LPJ_T0059356.1 MGP_LPJ_G0026868.1 mouse_genomes_project 2 176380122 176381155 - Bcas1 protein_coding processed_transcript MGP_LPJ_T0059357.1 MGP_LPJ_G0026868.1 mouse_genomes_project 2 176390562 176420656 - Bcas1 protein_coding processed_transcript MGP_LPJ_T0054330.1 MGP_LPJ_G0025595.1 mouse_genomes_project 2 34980372 34981293 + MGP_LPJ_P0054330 Olfr338 protein_coding protein_coding MGP_LPJ_T0013542.1 MGP_LPJ_G0011633.1 mouse_genomes_project 2 65812207 65812429 - processed_pseudogene processed_pseudogene MGP_LPJ_T0058296.1 MGP_LPJ_G0026638.1 mouse_genomes_project 2 158728302 158740706 + MGP_LPJ_P0058296 Bpifb6 protein_coding protein_coding MGP_LPJ_T0058297.1 MGP_LPJ_G0026638.1 mouse_genomes_project 2 158728309 158734838 + MGP_LPJ_P0058297 Bpifb6 protein_coding protein_coding MGP_LPJ_T0057289.1 MGP_LPJ_G0026381.1 mouse_genomes_project 2 130192066 130246872 + Usp8 protein_coding processed_transcript MGP_LPJ_T0057290.1 MGP_LPJ_G0026381.1 mouse_genomes_project 2 130192081 130246921 + MGP_LPJ_P0057290 Usp8 protein_coding protein_coding MGP_LPJ_T0057291.1 MGP_LPJ_G0026381.1 mouse_genomes_project 2 130192098 130246914 + MGP_LPJ_P0057291 Usp8 protein_coding protein_coding MGP_LPJ_T0053245.1 MGP_LPJ_G0025423.1 mouse_genomes_project 2 24491487 24541687 + MGP_LPJ_P0053245 Gm20532 protein_coding nonsense_mediated_decay MGP_LPJ_T0058622.1 MGP_LPJ_G0026701.1 mouse_genomes_project 2 161437955 161566041 + MGP_LPJ_P0058622 Epb41l1 protein_coding protein_coding MGP_LPJ_T0058623.1 MGP_LPJ_G0026701.1 mouse_genomes_project 2 161438094 161566041 + MGP_LPJ_P0058623 Epb41l1 protein_coding protein_coding MGP_LPJ_T0058624.1 MGP_LPJ_G0026701.1 mouse_genomes_project 2 161438098 161524536 + Epb41l1 protein_coding processed_transcript MGP_LPJ_T0058625.1 MGP_LPJ_G0026701.1 mouse_genomes_project 2 161438130 161545134 + MGP_LPJ_P0058625 Epb41l1 protein_coding protein_coding MGP_LPJ_T0058626.1 MGP_LPJ_G0026701.1 mouse_genomes_project 2 161438147 161566041 + MGP_LPJ_P0058626 Epb41l1 protein_coding protein_coding MGP_LPJ_T0058627.1 MGP_LPJ_G0026701.1 mouse_genomes_project 2 161438158 161566041 + MGP_LPJ_P0058627 Epb41l1 protein_coding protein_coding MGP_LPJ_T0058628.1 MGP_LPJ_G0026701.1 mouse_genomes_project 2 161496519 161521783 + Epb41l1 protein_coding processed_transcript MGP_LPJ_T0058629.1 MGP_LPJ_G0026701.1 mouse_genomes_project 2 161496806 161566041 + MGP_LPJ_P0058629 Epb41l1 protein_coding protein_coding MGP_LPJ_T0058630.1 MGP_LPJ_G0026701.1 mouse_genomes_project 2 161496811 161566036 + MGP_LPJ_P0058630 Epb41l1 protein_coding unknown_likely_coding MGP_LPJ_T0058631.1 MGP_LPJ_G0026701.1 mouse_genomes_project 2 161496852 161566041 + MGP_LPJ_P0058631 Epb41l1 protein_coding protein_coding MGP_LPJ_T0058632.1 MGP_LPJ_G0026701.1 mouse_genomes_project 2 161516017 161566041 + MGP_LPJ_P0058632 Epb41l1 protein_coding protein_coding MGP_LPJ_T0058633.1 MGP_LPJ_G0026701.1 mouse_genomes_project 2 161528502 161536214 + Epb41l1 protein_coding processed_transcript MGP_LPJ_T0058634.1 MGP_LPJ_G0026701.1 mouse_genomes_project 2 161556395 161562852 + Epb41l1 protein_coding retained_intron MGP_LPJ_T0058635.1 MGP_LPJ_G0026701.1 mouse_genomes_project 2 161560247 161563193 + Epb41l1 protein_coding processed_transcript MGP_LPJ_T0013437.1 MGP_LPJ_G0011528.1 mouse_genomes_project 2 24630986 24631680 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013564.1 MGP_LPJ_G0011655.1 mouse_genomes_project 2 73319093 73319438 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013582.1 MGP_LPJ_G0011673.1 mouse_genomes_project 2 79418083 79418285 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007185.1 MGP_LPJ_G0005894.1 mouse_genomes_project 2 30866489 30869517 + Gm13412 lincRNA lincRNA MGP_LPJ_T0100642.1 MGP_LPJ_G0038905.1 mouse_genomes_project 2 170173959 170174090 + Gm24473 snoRNA snoRNA MGP_LPJ_T0010405.1 MGP_LPJ_G0008523.1 mouse_genomes_project 2 24368064 24368125 - Mir6996 miRNA miRNA MGP_LPJ_T0057971.1 MGP_LPJ_G0026537.1 mouse_genomes_project 2 151249194 151365154 + MGP_LPJ_P0057971 Kiz protein_coding protein_coding MGP_LPJ_T0057972.1 MGP_LPJ_G0026537.1 mouse_genomes_project 2 151249239 151282750 + MGP_LPJ_P0057972 Kiz protein_coding protein_coding MGP_LPJ_T0057973.1 MGP_LPJ_G0026537.1 mouse_genomes_project 2 151346878 151365149 + Kiz protein_coding retained_intron MGP_LPJ_T0010497.1 MGP_LPJ_G0008615.1 mouse_genomes_project 2 168540996 168541121 + Gm22174 miRNA miRNA MGP_LPJ_T0013710.1 MGP_LPJ_G0011801.1 mouse_genomes_project 2 131131972 131141383 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007314.1 MGP_LPJ_G0006000.1 mouse_genomes_project 2 118939063 118940298 - 2700033N17Rik lincRNA lincRNA MGP_LPJ_T0052341.1 MGP_LPJ_G0025263.1 mouse_genomes_project 2 7064600 7089031 - MGP_LPJ_P0052341 Gata3 protein_coding protein_coding MGP_LPJ_T0052342.1 MGP_LPJ_G0025263.1 mouse_genomes_project 2 7072786 7084104 - Gata3 protein_coding processed_transcript MGP_LPJ_T0052343.1 MGP_LPJ_G0025263.1 mouse_genomes_project 2 7084918 7085831 - Gata3 protein_coding processed_transcript MGP_LPJ_T0052344.1 MGP_LPJ_G0025263.1 mouse_genomes_project 2 7085133 7100449 - MGP_LPJ_P0052344 Gata3 protein_coding protein_coding MGP_LPJ_T0052345.1 MGP_LPJ_G0025263.1 mouse_genomes_project 2 7088266 7098199 - Gata3 protein_coding processed_transcript MGP_LPJ_T0052346.1 MGP_LPJ_G0025263.1 mouse_genomes_project 2 7088321 7100417 - Gata3 protein_coding processed_transcript MGP_LPJ_T0059488.1 MGP_LPJ_G0026910.1 mouse_genomes_project 2 184826742 184830009 - MGP_LPJ_P0059488 Ppp1r3d protein_coding protein_coding MGP_LPJ_T0007156.1 MGP_LPJ_G0005874.1 mouse_genomes_project 2 10046505 10055932 + Gm37565 lincRNA lincRNA MGP_LPJ_T0013570.1 MGP_LPJ_G0011661.1 mouse_genomes_project 2 76039416 76039873 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001093.1 MGP_LPJ_G0001018.1 mouse_genomes_project 2 32054609 32054888 + TEC TEC MGP_LPJ_T0055728.1 MGP_LPJ_G0025999.1 mouse_genomes_project 2 89952930 89953533 + MGP_LPJ_P0055728 protein_coding protein_coding MGP_LPJ_T0058821.1 MGP_LPJ_G0026742.1 mouse_genomes_project 2 166055991 166179387 - Zhx3 protein_coding processed_transcript MGP_LPJ_T0058829.1 MGP_LPJ_G0026742.1 mouse_genomes_project 2 166072468 166178961 - MGP_LPJ_P0058829 Zhx3 protein_coding protein_coding MGP_LPJ_T0058830.1 MGP_LPJ_G0026742.1 mouse_genomes_project 2 166073065 166165984 - MGP_LPJ_P0058830 Zhx3 protein_coding protein_coding MGP_LPJ_T0058831.1 MGP_LPJ_G0026742.1 mouse_genomes_project 2 166077730 166179379 - MGP_LPJ_P0058831 Zhx3 protein_coding protein_coding MGP_LPJ_T0058832.1 MGP_LPJ_G0026742.1 mouse_genomes_project 2 166089227 166179218 - MGP_LPJ_P0058832 Zhx3 protein_coding protein_coding MGP_LPJ_T0058833.1 MGP_LPJ_G0026742.1 mouse_genomes_project 2 166089264 166179379 - MGP_LPJ_P0058833 Zhx3 protein_coding protein_coding MGP_LPJ_T0010410.1 MGP_LPJ_G0008528.1 mouse_genomes_project 2 26758344 26758418 + Mir3088 miRNA miRNA MGP_LPJ_T0059423.1 MGP_LPJ_G0026895.1 mouse_genomes_project 2 179961890 180017210 + MGP_LPJ_P0059423 Vapb protein_coding protein_coding MGP_LPJ_T0059424.1 MGP_LPJ_G0026895.1 mouse_genomes_project 2 180000358 180009548 + Vapb protein_coding processed_transcript MGP_LPJ_T0059020.1 MGP_LPJ_G0026805.1 mouse_genomes_project 2 170301154 170325007 + MGP_LPJ_P0059020 Dnttip1 protein_coding protein_coding MGP_LPJ_T0059021.1 MGP_LPJ_G0026805.1 mouse_genomes_project 2 170301185 170306624 + MGP_LPJ_P0059021 Dnttip1 protein_coding protein_coding MGP_LPJ_T0059022.1 MGP_LPJ_G0026805.1 mouse_genomes_project 2 170301202 170316747 + MGP_LPJ_P0059022 Dnttip1 protein_coding protein_coding MGP_LPJ_T0059023.1 MGP_LPJ_G0026805.1 mouse_genomes_project 2 170309367 170314746 + Dnttip1 protein_coding retained_intron MGP_LPJ_T0055532.1 MGP_LPJ_G0025848.1 mouse_genomes_project 2 85485507 85491713 + Prg3 protein_coding processed_transcript MGP_LPJ_T0055533.1 MGP_LPJ_G0025848.1 mouse_genomes_project 2 85485507 85491812 + MGP_LPJ_P0055533 Prg3 protein_coding protein_coding MGP_LPJ_T0058263.1 MGP_LPJ_G0026630.1 mouse_genomes_project 2 158199227 158328947 - MGP_LPJ_P0058263 Nol4l protein_coding protein_coding MGP_LPJ_T0058264.1 MGP_LPJ_G0026630.1 mouse_genomes_project 2 158210954 158238111 - Nol4l protein_coding processed_transcript MGP_LPJ_T0058265.1 MGP_LPJ_G0026630.1 mouse_genomes_project 2 158247662 158280808 - Nol4l protein_coding processed_transcript MGP_LPJ_T0058266.1 MGP_LPJ_G0026630.1 mouse_genomes_project 2 158253487 158289499 - Nol4l protein_coding processed_transcript MGP_LPJ_T0058267.1 MGP_LPJ_G0026630.1 mouse_genomes_project 2 158257286 158275676 - Nol4l protein_coding processed_transcript MGP_LPJ_T0013457.1 MGP_LPJ_G0011548.1 mouse_genomes_project 2 35495078 35495574 + processed_pseudogene processed_pseudogene MGP_LPJ_T0055638.1 MGP_LPJ_G0025921.1 mouse_genomes_project 2 87733138 87734107 + MGP_LPJ_P0055638 Olfr1093 protein_coding protein_coding MGP_LPJ_T0056510.1 MGP_LPJ_G0026197.1 mouse_genomes_project 2 113887925 113888843 + MGP_LPJ_P0056510 protein_coding protein_coding MGP_LPJ_T0053916.1 MGP_LPJ_G0025532.1 mouse_genomes_project 2 30605747 30617329 + MGP_LPJ_P0053916 Golga2 protein_coding protein_coding MGP_LPJ_T0053917.1 MGP_LPJ_G0025532.1 mouse_genomes_project 2 30606616 30627536 + MGP_LPJ_P0053917 Golga2 protein_coding protein_coding MGP_LPJ_T0053918.1 MGP_LPJ_G0025532.1 mouse_genomes_project 2 30606676 30627527 + MGP_LPJ_P0053918 Golga2 protein_coding protein_coding MGP_LPJ_T0053919.1 MGP_LPJ_G0025532.1 mouse_genomes_project 2 30606689 30616806 + Golga2 protein_coding retained_intron MGP_LPJ_T0053920.1 MGP_LPJ_G0025532.1 mouse_genomes_project 2 30606723 30622574 + MGP_LPJ_P0053920 Golga2 protein_coding protein_coding MGP_LPJ_T0053921.1 MGP_LPJ_G0025532.1 mouse_genomes_project 2 30606736 30627528 + MGP_LPJ_P0053921 Golga2 protein_coding protein_coding MGP_LPJ_T0053922.1 MGP_LPJ_G0025532.1 mouse_genomes_project 2 30606741 30618863 + MGP_LPJ_P0053922 Golga2 protein_coding protein_coding MGP_LPJ_T0053923.1 MGP_LPJ_G0025532.1 mouse_genomes_project 2 30606745 30621815 + MGP_LPJ_P0053923 Golga2 protein_coding protein_coding MGP_LPJ_T0053924.1 MGP_LPJ_G0025532.1 mouse_genomes_project 2 30616632 30627525 + Golga2 protein_coding retained_intron MGP_LPJ_T0053925.1 MGP_LPJ_G0025532.1 mouse_genomes_project 2 30618341 30618824 + Golga2 protein_coding retained_intron MGP_LPJ_T0053926.1 MGP_LPJ_G0025532.1 mouse_genomes_project 2 30620782 30622564 + Golga2 protein_coding retained_intron MGP_LPJ_T0013720.1 MGP_LPJ_G0011811.1 mouse_genomes_project 2 134612223 134613491 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017739.1 MGP_LPJ_G0015349.1 mouse_genomes_project 2 78212050 78213765 - Gm13727 processed_transcript processed_transcript MGP_LPJ_T0052930.1 MGP_LPJ_G0025366.1 mouse_genomes_project 2 23085210 23098325 + MGP_LPJ_P0052930 Anapc2 protein_coding protein_coding MGP_LPJ_T0052931.1 MGP_LPJ_G0025366.1 mouse_genomes_project 2 23085327 23089104 + Anapc2 protein_coding processed_transcript MGP_LPJ_T0052932.1 MGP_LPJ_G0025366.1 mouse_genomes_project 2 23086210 23091138 + MGP_LPJ_P0052932 Anapc2 protein_coding protein_coding MGP_LPJ_T0052933.1 MGP_LPJ_G0025366.1 mouse_genomes_project 2 23091725 23093190 + Anapc2 protein_coding processed_transcript MGP_LPJ_T0055643.1 MGP_LPJ_G0025926.1 mouse_genomes_project 2 87949138 87950077 - MGP_LPJ_P0055643 Olfr1099 protein_coding protein_coding MGP_LPJ_T0057496.1 MGP_LPJ_G0026434.1 mouse_genomes_project 2 133891315 133972349 + MGP_LPJ_P0057496 Tmc2 protein_coding protein_coding MGP_LPJ_T0057497.1 MGP_LPJ_G0026434.1 mouse_genomes_project 2 133892666 133972121 + MGP_LPJ_P0057497 Tmc2 protein_coding protein_coding MGP_LPJ_T0059593.1 MGP_LPJ_G0026935.1 mouse_genomes_project 2 187331477 187333997 - MGP_LPJ_P0059593 Bhlhe23 protein_coding protein_coding MGP_LPJ_T0059386.1 MGP_LPJ_G0026883.1 mouse_genomes_project 2 179036729 179116310 - MGP_LPJ_P0059386 Bmp7 protein_coding protein_coding MGP_LPJ_T0059387.1 MGP_LPJ_G0026883.1 mouse_genomes_project 2 179091327 179116081 - Bmp7 protein_coding retained_intron MGP_LPJ_T0054911.1 MGP_LPJ_G0025715.1 mouse_genomes_project 2 65947885 65997580 - MGP_LPJ_P0054911 Scn1a protein_coding nonsense_mediated_decay MGP_LPJ_T0054912.1 MGP_LPJ_G0025715.1 mouse_genomes_project 2 65947888 66094941 - MGP_LPJ_P0054912 Scn1a protein_coding protein_coding MGP_LPJ_T0054913.1 MGP_LPJ_G0025715.1 mouse_genomes_project 2 65947889 66124523 - MGP_LPJ_P0054913 Scn1a protein_coding protein_coding MGP_LPJ_T0054914.1 MGP_LPJ_G0025715.1 mouse_genomes_project 2 65947891 66032614 - MGP_LPJ_P0054914 Scn1a protein_coding protein_coding MGP_LPJ_T0054915.1 MGP_LPJ_G0025715.1 mouse_genomes_project 2 65949992 66032596 - MGP_LPJ_P0054915 Scn1a protein_coding protein_coding MGP_LPJ_T0054916.1 MGP_LPJ_G0025715.1 mouse_genomes_project 2 65949999 65997773 - MGP_LPJ_P0054916 Scn1a protein_coding protein_coding MGP_LPJ_T0054917.1 MGP_LPJ_G0025715.1 mouse_genomes_project 2 66006933 66124526 - MGP_LPJ_P0054917 Scn1a protein_coding protein_coding MGP_LPJ_T0054918.1 MGP_LPJ_G0025715.1 mouse_genomes_project 2 66029792 66124500 - Scn1a protein_coding retained_intron MGP_LPJ_T0007351.1 MGP_LPJ_G0006029.1 mouse_genomes_project 2 139731075 139732058 - Gm14210 lincRNA lincRNA MGP_LPJ_T0058412.1 MGP_LPJ_G0026671.1 mouse_genomes_project 2 160349095 160408961 - MGP_LPJ_P0058412 Ncoa6 protein_coding protein_coding MGP_LPJ_T0058413.1 MGP_LPJ_G0026671.1 mouse_genomes_project 2 160349104 160445373 - MGP_LPJ_P0058413 Ncoa6 protein_coding protein_coding MGP_LPJ_T0058414.1 MGP_LPJ_G0026671.1 mouse_genomes_project 2 160349108 160362167 - Ncoa6 protein_coding retained_intron MGP_LPJ_T0058415.1 MGP_LPJ_G0026671.1 mouse_genomes_project 2 160349108 160369006 - Ncoa6 protein_coding retained_intron MGP_LPJ_T0058416.1 MGP_LPJ_G0026671.1 mouse_genomes_project 2 160372279 160445461 - MGP_LPJ_P0058416 Ncoa6 protein_coding protein_coding MGP_LPJ_T0058417.1 MGP_LPJ_G0026671.1 mouse_genomes_project 2 160381498 160385015 - Ncoa6 protein_coding processed_transcript MGP_LPJ_T0058418.1 MGP_LPJ_G0026671.1 mouse_genomes_project 2 160386387 160408963 - MGP_LPJ_P0058418 Ncoa6 protein_coding protein_coding MGP_LPJ_T0058419.1 MGP_LPJ_G0026671.1 mouse_genomes_project 2 160406192 160445391 - Ncoa6 protein_coding processed_transcript MGP_LPJ_T0017730.1 MGP_LPJ_G0015341.1 mouse_genomes_project 2 69729988 69730758 - Gm13625 processed_transcript processed_transcript MGP_LPJ_T0057752.1 MGP_LPJ_G0026490.1 mouse_genomes_project 2 138491912 138533557 - MGP_LPJ_P0057752 Tmx4 protein_coding protein_coding MGP_LPJ_T0057753.1 MGP_LPJ_G0026490.1 mouse_genomes_project 2 138496734 138533544 - Tmx4 protein_coding processed_transcript MGP_LPJ_T0057754.1 MGP_LPJ_G0026490.1 mouse_genomes_project 2 138528620 138533502 - MGP_LPJ_P0057754 Tmx4 protein_coding protein_coding MGP_LPJ_T0059045.1 MGP_LPJ_G0026813.1 mouse_genomes_project 2 170394154 170396880 - MGP_LPJ_P0059045 Neurl2 protein_coding protein_coding MGP_LPJ_T0058298.1 MGP_LPJ_G0026639.1 mouse_genomes_project 2 158746137 158760883 + MGP_LPJ_P0058298 Bpifb3 protein_coding protein_coding MGP_LPJ_T0058299.1 MGP_LPJ_G0026639.1 mouse_genomes_project 2 158746301 158760880 + MGP_LPJ_P0058299 Bpifb3 protein_coding protein_coding MGP_LPJ_T0010495.1 MGP_LPJ_G0008613.1 mouse_genomes_project 2 164290937 164291030 + Gm44319 miRNA miRNA MGP_LPJ_T0099328.1 MGP_LPJ_G0037591.1 mouse_genomes_project 2 43256954 43257063 + Gm22867 snRNA snRNA MGP_LPJ_T0053091.1 MGP_LPJ_G0025393.1 mouse_genomes_project 2 23502435 23505533 + MGP_LPJ_P0053091 Lcn8 protein_coding protein_coding MGP_LPJ_T0055582.1 MGP_LPJ_G0025868.1 mouse_genomes_project 2 86410643 86415569 + MGP_LPJ_P0055582 protein_coding protein_coding MGP_LPJ_T0057959.1 MGP_LPJ_G0026535.1 mouse_genomes_project 2 150591727 150594825 + MGP_LPJ_P0057959 Insm1 protein_coding protein_coding MGP_LPJ_T0053751.1 MGP_LPJ_G0025506.1 mouse_genomes_project 2 29026192 29076124 + MGP_LPJ_P0053751 Prrx2 protein_coding protein_coding MGP_LPJ_T0053752.1 MGP_LPJ_G0025506.1 mouse_genomes_project 2 29036279 29076153 + MGP_LPJ_P0053752 Prrx2 protein_coding protein_coding MGP_LPJ_T0053753.1 MGP_LPJ_G0025506.1 mouse_genomes_project 2 29036664 29073559 + Prrx2 protein_coding retained_intron MGP_LPJ_T0053754.1 MGP_LPJ_G0025506.1 mouse_genomes_project 2 29074220 29076022 + Prrx2 protein_coding retained_intron MGP_LPJ_T0007376.1 MGP_LPJ_G0006049.1 mouse_genomes_project 2 156504140 156507201 + Gm14155 lincRNA lincRNA MGP_LPJ_T0003909.1 MGP_LPJ_G0003498.1 mouse_genomes_project 2 7118742 7127195 + Gm13262 antisense antisense MGP_LPJ_T0057169.1 MGP_LPJ_G0026352.1 mouse_genomes_project 2 125661467 125796936 + MGP_LPJ_P0057169 protein_coding protein_coding MGP_LPJ_T0057171.1 MGP_LPJ_G0026352.1 mouse_genomes_project 2 125790531 125796360 + protein_coding processed_transcript MGP_LPJ_T0013370.1 MGP_LPJ_G0011461.1 mouse_genomes_project 2 674844 675633 - processed_pseudogene processed_pseudogene MGP_LPJ_T0053651.1 MGP_LPJ_G0025495.1 mouse_genomes_project 2 28413653 28475183 + MGP_LPJ_P0053651 protein_coding protein_coding MGP_LPJ_T0053652.1 MGP_LPJ_G0025495.1 mouse_genomes_project 2 28413653 28435350 + MGP_LPJ_P0053652 protein_coding nonsense_mediated_decay MGP_LPJ_T0053653.1 MGP_LPJ_G0025495.1 mouse_genomes_project 2 28413673 28431710 + protein_coding processed_transcript MGP_LPJ_T0053654.1 MGP_LPJ_G0025495.1 mouse_genomes_project 2 28413680 28431428 + MGP_LPJ_P0053654 protein_coding protein_coding MGP_LPJ_T0053655.1 MGP_LPJ_G0025495.1 mouse_genomes_project 2 28413683 28431427 + MGP_LPJ_P0053655 protein_coding protein_coding MGP_LPJ_T0053656.1 MGP_LPJ_G0025495.1 mouse_genomes_project 2 28413685 28456511 + protein_coding retained_intron MGP_LPJ_T0053657.1 MGP_LPJ_G0025495.1 mouse_genomes_project 2 28473856 28475062 + protein_coding retained_intron MGP_LPJ_T0055658.1 MGP_LPJ_G0025941.1 mouse_genomes_project 2 88296219 88297215 + MGP_LPJ_P0055658 Olfr1116 protein_coding protein_coding MGP_LPJ_T0004186.1 MGP_LPJ_G0003699.1 mouse_genomes_project 2 172659816 172660660 + Gm17096 antisense antisense MGP_LPJ_T0058497.1 MGP_LPJ_G0026686.1 mouse_genomes_project 2 160939426 160943748 - MGP_LPJ_P0058497 Gdf5 protein_coding protein_coding MGP_LPJ_T0017676.1 MGP_LPJ_G0015309.1 mouse_genomes_project 2 7580466 7629410 - Gm13261 processed_transcript processed_transcript MGP_LPJ_T0054347.1 MGP_LPJ_G0025611.1 mouse_genomes_project 2 35492931 35493885 + MGP_LPJ_P0054347 Olfr354 protein_coding protein_coding MGP_LPJ_T0057916.1 MGP_LPJ_G0026528.1 mouse_genomes_project 2 148855909 149030233 + MGP_LPJ_P0057916 Dtd1 protein_coding protein_coding MGP_LPJ_T0057917.1 MGP_LPJ_G0026528.1 mouse_genomes_project 2 148874883 149029915 + Dtd1 protein_coding processed_transcript MGP_LPJ_T0057918.1 MGP_LPJ_G0026528.1 mouse_genomes_project 2 148937697 149009963 + Dtd1 protein_coding processed_transcript MGP_LPJ_T0057919.1 MGP_LPJ_G0026528.1 mouse_genomes_project 2 148996161 149029969 + Dtd1 protein_coding processed_transcript MGP_LPJ_T0057920.1 MGP_LPJ_G0026528.1 mouse_genomes_project 2 149001343 149029750 + Dtd1 protein_coding processed_transcript MGP_LPJ_T0102062.1 MGP_LPJ_G0040099.1 mouse_genomes_project 2 109543092 109543285 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0102050.1 MGP_LPJ_G0040087.1 mouse_genomes_project 2 89517752 89518691 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0054042.1 MGP_LPJ_G0025549.1 mouse_genomes_project 2 31062508 31068546 - protein_coding retained_intron MGP_LPJ_T0054043.1 MGP_LPJ_G0025549.1 mouse_genomes_project 2 31065292 31070695 - MGP_LPJ_P0054043 protein_coding nonsense_mediated_decay MGP_LPJ_T0054044.1 MGP_LPJ_G0025549.1 mouse_genomes_project 2 31065478 31067099 - protein_coding retained_intron MGP_LPJ_T0054045.1 MGP_LPJ_G0025549.1 mouse_genomes_project 2 31066909 31067727 - protein_coding retained_intron MGP_LPJ_T0054046.1 MGP_LPJ_G0025549.1 mouse_genomes_project 2 31067033 31067880 - protein_coding retained_intron MGP_LPJ_T0054047.1 MGP_LPJ_G0025549.1 mouse_genomes_project 2 31067233 31070376 - MGP_LPJ_P0054047 protein_coding nonsense_mediated_decay MGP_LPJ_T0054048.1 MGP_LPJ_G0025549.1 mouse_genomes_project 2 31067535 31069752 - MGP_LPJ_P0054048 protein_coding protein_coding MGP_LPJ_T0059705.1 MGP_LPJ_G0026953.1 mouse_genomes_project 2 187977946 187993841 + MGP_LPJ_P0059705 Zgpat protein_coding protein_coding MGP_LPJ_T0059706.1 MGP_LPJ_G0026953.1 mouse_genomes_project 2 187978423 187993829 + MGP_LPJ_P0059706 Zgpat protein_coding protein_coding MGP_LPJ_T0059707.1 MGP_LPJ_G0026953.1 mouse_genomes_project 2 187978441 187996675 + MGP_LPJ_P0059707 Zgpat protein_coding nonsense_mediated_decay MGP_LPJ_T0059708.1 MGP_LPJ_G0026953.1 mouse_genomes_project 2 187978470 187996673 + Zgpat protein_coding retained_intron MGP_LPJ_T0059709.1 MGP_LPJ_G0026953.1 mouse_genomes_project 2 187991440 187992866 + Zgpat protein_coding retained_intron MGP_LPJ_T0059710.1 MGP_LPJ_G0026953.1 mouse_genomes_project 2 187992685 187993785 + MGP_LPJ_P0059710 Zgpat protein_coding protein_coding MGP_LPJ_T0057525.1 MGP_LPJ_G0026442.1 mouse_genomes_project 2 134128254 134135256 - Pced1a protein_coding processed_transcript MGP_LPJ_T0057526.1 MGP_LPJ_G0026442.1 mouse_genomes_project 2 134128689 134135286 - MGP_LPJ_P0057526 Pced1a protein_coding protein_coding MGP_LPJ_T0057527.1 MGP_LPJ_G0026442.1 mouse_genomes_project 2 134129212 134135289 - Pced1a protein_coding processed_transcript MGP_LPJ_T0057528.1 MGP_LPJ_G0026442.1 mouse_genomes_project 2 134129236 134135274 - Pced1a protein_coding retained_intron MGP_LPJ_T0057529.1 MGP_LPJ_G0026442.1 mouse_genomes_project 2 134129965 134135695 - MGP_LPJ_P0057529 Pced1a protein_coding protein_coding MGP_LPJ_T0057530.1 MGP_LPJ_G0026442.1 mouse_genomes_project 2 134129976 134135709 - Pced1a protein_coding retained_intron MGP_LPJ_T0057531.1 MGP_LPJ_G0026442.1 mouse_genomes_project 2 134132896 134135318 - Pced1a protein_coding retained_intron MGP_LPJ_T0055811.1 MGP_LPJ_G0026061.1 mouse_genomes_project 2 91420034 91420943 - MGP_LPJ_P0055811 Olfr140 protein_coding protein_coding MGP_LPJ_T0055812.1 MGP_LPJ_G0026061.1 mouse_genomes_project 2 91420034 91432611 - MGP_LPJ_P0055812 Olfr140 protein_coding protein_coding MGP_LPJ_T0102039.1 MGP_LPJ_G0040076.1 mouse_genomes_project 2 87494370 87509816 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013425.1 MGP_LPJ_G0011516.1 mouse_genomes_project 2 20690278 20690815 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013503.1 MGP_LPJ_G0011594.1 mouse_genomes_project 2 51568897 51570565 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007200.1 MGP_LPJ_G0005905.1 mouse_genomes_project 2 37056075 37090440 + Gm13589 lincRNA lincRNA MGP_LPJ_T0004074.1 MGP_LPJ_G0003616.1 mouse_genomes_project 2 116474457 116491908 - 4930533B01Rik antisense antisense MGP_LPJ_T0013410.1 MGP_LPJ_G0011501.1 mouse_genomes_project 2 15894627 15895038 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007276.1 MGP_LPJ_G0005971.1 mouse_genomes_project 2 94760787 94773006 - Gm13802 lincRNA lincRNA MGP_LPJ_T0007298.1 MGP_LPJ_G0005986.1 mouse_genomes_project 2 107960567 107963398 - Paupar lincRNA lincRNA MGP_LPJ_T0059498.1 MGP_LPJ_G0026913.1 mouse_genomes_project 2 186385437 186455879 - MGP_LPJ_P0059498 Taf4 protein_coding protein_coding MGP_LPJ_T0059499.1 MGP_LPJ_G0026913.1 mouse_genomes_project 2 186386724 186424451 - MGP_LPJ_P0059499 Taf4 protein_coding unknown_likely_coding MGP_LPJ_T0059500.1 MGP_LPJ_G0026913.1 mouse_genomes_project 2 186394522 186395505 - Taf4 protein_coding processed_transcript MGP_LPJ_T0059501.1 MGP_LPJ_G0026913.1 mouse_genomes_project 2 186395300 186402765 - Taf4 protein_coding processed_transcript MGP_LPJ_T0102040.1 MGP_LPJ_G0040077.1 mouse_genomes_project 2 88000686 88001625 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013520.1 MGP_LPJ_G0011611.1 mouse_genomes_project 2 57739146 57739628 + processed_pseudogene processed_pseudogene MGP_LPJ_T0055817.1 MGP_LPJ_G0026066.1 mouse_genomes_project 2 91623931 91633435 - MGP_LPJ_P0055817 Olfr142 protein_coding protein_coding MGP_LPJ_T0098235.1 MGP_LPJ_G0036516.1 mouse_genomes_project 2 115212174 115212288 - n-R5s202 rRNA rRNA MGP_LPJ_T0013708.1 MGP_LPJ_G0011799.1 mouse_genomes_project 2 130354840 130355666 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013777.1 MGP_LPJ_G0011868.1 mouse_genomes_project 2 155540581 155542680 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013804.1 MGP_LPJ_G0011895.1 mouse_genomes_project 2 162247863 162248234 + processed_pseudogene processed_pseudogene MGP_LPJ_T0058156.1 MGP_LPJ_G0026593.1 mouse_genomes_project 2 157065830 157073727 - MGP_LPJ_P0058156 Nrsn2 protein_coding protein_coding MGP_LPJ_T0052720.1 MGP_LPJ_G0025326.1 mouse_genomes_project 2 20739752 20785244 + MGP_LPJ_P0052720 Acbd5 protein_coding protein_coding MGP_LPJ_T0052721.1 MGP_LPJ_G0025326.1 mouse_genomes_project 2 20739785 20785244 + MGP_LPJ_P0052721 Acbd5 protein_coding protein_coding MGP_LPJ_T0052722.1 MGP_LPJ_G0025326.1 mouse_genomes_project 2 20739819 20747180 + MGP_LPJ_P0052722 Acbd5 protein_coding protein_coding MGP_LPJ_T0052723.1 MGP_LPJ_G0025326.1 mouse_genomes_project 2 20740652 20785242 + MGP_LPJ_P0052723 Acbd5 protein_coding protein_coding MGP_LPJ_T0052724.1 MGP_LPJ_G0025326.1 mouse_genomes_project 2 20740656 20785244 + MGP_LPJ_P0052724 Acbd5 protein_coding protein_coding MGP_LPJ_T0052725.1 MGP_LPJ_G0025326.1 mouse_genomes_project 2 20740677 20785250 + MGP_LPJ_P0052725 Acbd5 protein_coding unknown_likely_coding MGP_LPJ_T0052726.1 MGP_LPJ_G0025326.1 mouse_genomes_project 2 20740911 20759173 + MGP_LPJ_P0052726 Acbd5 protein_coding protein_coding MGP_LPJ_T0054075.1 MGP_LPJ_G0025555.1 mouse_genomes_project 2 31144230 31151358 - MGP_LPJ_P0054075 Cfap157 protein_coding protein_coding MGP_LPJ_T0054076.1 MGP_LPJ_G0025555.1 mouse_genomes_project 2 31145064 31145966 - Cfap157 protein_coding retained_intron MGP_LPJ_T0003999.1 MGP_LPJ_G0003567.1 mouse_genomes_project 2 65504480 65512692 - Gm13619 antisense antisense MGP_LPJ_T0010430.1 MGP_LPJ_G0008548.1 mouse_genomes_project 2 37278417 37281221 - miRNA miRNA MGP_LPJ_T0059398.1 MGP_LPJ_G0026886.1 mouse_genomes_project 2 179202469 179214481 + MGP_LPJ_P0059398 Rbm38 protein_coding nonsense_mediated_decay MGP_LPJ_T0059399.1 MGP_LPJ_G0026886.1 mouse_genomes_project 2 179202483 179215296 + Rbm38 protein_coding retained_intron MGP_LPJ_T0059400.1 MGP_LPJ_G0026886.1 mouse_genomes_project 2 179202610 179214377 + MGP_LPJ_P0059400 Rbm38 protein_coding protein_coding MGP_LPJ_T0059401.1 MGP_LPJ_G0026886.1 mouse_genomes_project 2 179202681 179214218 + MGP_LPJ_P0059401 Rbm38 protein_coding nonsense_mediated_decay MGP_LPJ_T0059402.1 MGP_LPJ_G0026886.1 mouse_genomes_project 2 179203008 179214277 + MGP_LPJ_P0059402 Rbm38 protein_coding protein_coding MGP_LPJ_T0059403.1 MGP_LPJ_G0026886.1 mouse_genomes_project 2 179203619 179215268 + Rbm38 protein_coding retained_intron MGP_LPJ_T0055670.1 MGP_LPJ_G0025950.1 mouse_genomes_project 2 88577926 88580595 + Pramel6 protein_coding processed_transcript MGP_LPJ_T0055671.1 MGP_LPJ_G0025950.1 mouse_genomes_project 2 88577926 88580586 + Pramel6 protein_coding processed_transcript MGP_LPJ_T0055672.1 MGP_LPJ_G0025950.1 mouse_genomes_project 2 88577944 88580766 + Pramel6 protein_coding processed_transcript MGP_LPJ_T0055673.1 MGP_LPJ_G0025950.1 mouse_genomes_project 2 88578788 88580679 + Pramel6 protein_coding processed_transcript MGP_LPJ_T0055674.1 MGP_LPJ_G0025950.1 mouse_genomes_project 2 88578788 88582239 + MGP_LPJ_P0055674 Pramel6 protein_coding protein_coding MGP_LPJ_T0055675.1 MGP_LPJ_G0025950.1 mouse_genomes_project 2 88579821 88582232 + MGP_LPJ_P0055675 Pramel6 protein_coding protein_coding MGP_LPJ_T0052829.1 MGP_LPJ_G0025348.1 mouse_genomes_project 2 22765136 22855169 + MGP_LPJ_P0052829 Pnpla7 protein_coding protein_coding MGP_LPJ_T0052830.1 MGP_LPJ_G0025348.1 mouse_genomes_project 2 22765176 22855169 + MGP_LPJ_P0052830 Pnpla7 protein_coding nonsense_mediated_decay MGP_LPJ_T0052831.1 MGP_LPJ_G0025348.1 mouse_genomes_project 2 22765191 22770862 + MGP_LPJ_P0052831 Pnpla7 protein_coding protein_coding MGP_LPJ_T0052832.1 MGP_LPJ_G0025348.1 mouse_genomes_project 2 22765192 22788780 + MGP_LPJ_P0052832 Pnpla7 protein_coding protein_coding MGP_LPJ_T0052833.1 MGP_LPJ_G0025348.1 mouse_genomes_project 2 22765204 22768930 + Pnpla7 protein_coding processed_transcript MGP_LPJ_T0052834.1 MGP_LPJ_G0025348.1 mouse_genomes_project 2 22765251 22840366 + Pnpla7 protein_coding retained_intron MGP_LPJ_T0052835.1 MGP_LPJ_G0025348.1 mouse_genomes_project 2 22770942 22778940 + Pnpla7 protein_coding processed_transcript MGP_LPJ_T0052836.1 MGP_LPJ_G0025348.1 mouse_genomes_project 2 22789134 22792150 + Pnpla7 protein_coding retained_intron MGP_LPJ_T0052837.1 MGP_LPJ_G0025348.1 mouse_genomes_project 2 22789626 22804285 + MGP_LPJ_P0052837 Pnpla7 protein_coding protein_coding MGP_LPJ_T0052838.1 MGP_LPJ_G0025348.1 mouse_genomes_project 2 22840547 22855169 + Pnpla7 protein_coding retained_intron MGP_LPJ_T0052839.1 MGP_LPJ_G0025348.1 mouse_genomes_project 2 22852463 22853202 + Pnpla7 protein_coding retained_intron MGP_LPJ_T0052840.1 MGP_LPJ_G0025348.1 mouse_genomes_project 2 22852777 22854880 + MGP_LPJ_P0052840 Pnpla7 protein_coding nonsense_mediated_decay MGP_LPJ_T0052841.1 MGP_LPJ_G0025348.1 mouse_genomes_project 2 22852832 22853448 + Pnpla7 protein_coding retained_intron MGP_LPJ_T0052842.1 MGP_LPJ_G0025348.1 mouse_genomes_project 2 22853019 22853963 + Pnpla7 protein_coding retained_intron MGP_LPJ_T0052843.1 MGP_LPJ_G0025348.1 mouse_genomes_project 2 22854265 22854967 + Pnpla7 protein_coding retained_intron MGP_LPJ_T0053851.1 MGP_LPJ_G0025521.1 mouse_genomes_project 2 30058827 30064709 - MGP_LPJ_P0053851 Qrfp protein_coding protein_coding MGP_LPJ_T0052582.1 MGP_LPJ_G0025304.1 mouse_genomes_project 2 15598142 15769090 + MGP_LPJ_P0052582 Mllt10 protein_coding protein_coding MGP_LPJ_T0052583.1 MGP_LPJ_G0025304.1 mouse_genomes_project 2 15610067 15675154 + Mllt10 protein_coding processed_transcript MGP_LPJ_T0052584.1 MGP_LPJ_G0025304.1 mouse_genomes_project 2 15610357 15678993 + Mllt10 protein_coding processed_transcript MGP_LPJ_T0052585.1 MGP_LPJ_G0025304.1 mouse_genomes_project 2 15610360 15767751 + MGP_LPJ_P0052585 Mllt10 protein_coding protein_coding MGP_LPJ_T0052586.1 MGP_LPJ_G0025304.1 mouse_genomes_project 2 15610478 15676618 + Mllt10 protein_coding processed_transcript MGP_LPJ_T0052587.1 MGP_LPJ_G0025304.1 mouse_genomes_project 2 15610507 15658928 + Mllt10 protein_coding processed_transcript MGP_LPJ_T0052588.1 MGP_LPJ_G0025304.1 mouse_genomes_project 2 15610514 15610883 + Mllt10 protein_coding processed_transcript MGP_LPJ_T0052589.1 MGP_LPJ_G0025304.1 mouse_genomes_project 2 15631009 15769098 + MGP_LPJ_P0052589 Mllt10 protein_coding protein_coding MGP_LPJ_T0052590.1 MGP_LPJ_G0025304.1 mouse_genomes_project 2 15676514 15714579 + Mllt10 protein_coding processed_transcript MGP_LPJ_T0052591.1 MGP_LPJ_G0025304.1 mouse_genomes_project 2 15725221 15744257 + Mllt10 protein_coding processed_transcript MGP_LPJ_T0058953.1 MGP_LPJ_G0026776.1 mouse_genomes_project 2 169708589 169716574 - MGP_LPJ_P0058953 Wfdc15b protein_coding protein_coding MGP_LPJ_T0058954.1 MGP_LPJ_G0026776.1 mouse_genomes_project 2 169708589 169716545 - MGP_LPJ_P0058954 Wfdc15b protein_coding protein_coding MGP_LPJ_T0058955.1 MGP_LPJ_G0026776.1 mouse_genomes_project 2 169708590 169709719 - MGP_LPJ_P0058955 Wfdc15b protein_coding protein_coding MGP_LPJ_T0057546.1 MGP_LPJ_G0026446.1 mouse_genomes_project 2 134287323 134288205 + MGP_LPJ_P0057546 Oxt protein_coding protein_coding MGP_LPJ_T0004149.1 MGP_LPJ_G0003671.1 mouse_genomes_project 2 159509336 159511977 - Gm14198 antisense antisense MGP_LPJ_T0057248.1 MGP_LPJ_G0026373.1 mouse_genomes_project 2 129295656 129296835 + Galk2 protein_coding processed_transcript MGP_LPJ_T0057249.1 MGP_LPJ_G0026373.1 mouse_genomes_project 2 129295681 129421977 + MGP_LPJ_P0057249 Galk2 protein_coding protein_coding MGP_LPJ_T0057250.1 MGP_LPJ_G0026373.1 mouse_genomes_project 2 129295695 129329604 + MGP_LPJ_P0057250 Galk2 protein_coding protein_coding MGP_LPJ_T0057251.1 MGP_LPJ_G0026373.1 mouse_genomes_project 2 129302588 129421265 + MGP_LPJ_P0057251 Galk2 protein_coding protein_coding MGP_LPJ_T0057252.1 MGP_LPJ_G0026373.1 mouse_genomes_project 2 129302588 129364938 + MGP_LPJ_P0057252 Galk2 protein_coding protein_coding MGP_LPJ_T0057253.1 MGP_LPJ_G0026373.1 mouse_genomes_project 2 129302724 129346857 + Galk2 protein_coding processed_transcript MGP_LPJ_T0057254.1 MGP_LPJ_G0026373.1 mouse_genomes_project 2 129302731 129332822 + MGP_LPJ_P0057254 Galk2 protein_coding protein_coding MGP_LPJ_T0057255.1 MGP_LPJ_G0026373.1 mouse_genomes_project 2 129302735 129364994 + MGP_LPJ_P0057255 Galk2 protein_coding nonsense_mediated_decay MGP_LPJ_T0057256.1 MGP_LPJ_G0026373.1 mouse_genomes_project 2 129302749 129384152 + Galk2 protein_coding retained_intron MGP_LPJ_T0013802.1 MGP_LPJ_G0011893.1 mouse_genomes_project 2 161952526 161952763 - processed_pseudogene processed_pseudogene MGP_LPJ_T0059512.1 MGP_LPJ_G0026917.1 mouse_genomes_project 2 186557347 186574733 + protein_coding retained_intron MGP_LPJ_T0059513.1 MGP_LPJ_G0026917.1 mouse_genomes_project 2 186557351 186569344 + protein_coding retained_intron MGP_LPJ_T0059514.1 MGP_LPJ_G0026917.1 mouse_genomes_project 2 186557351 186574740 + MGP_LPJ_P0059514 protein_coding nonsense_mediated_decay MGP_LPJ_T0059515.1 MGP_LPJ_G0026917.1 mouse_genomes_project 2 186557758 186574612 + MGP_LPJ_P0059515 protein_coding unknown_likely_coding MGP_LPJ_T0059516.1 MGP_LPJ_G0026917.1 mouse_genomes_project 2 186567373 186571627 + protein_coding retained_intron MGP_LPJ_T0059517.1 MGP_LPJ_G0026917.1 mouse_genomes_project 2 186571828 186574738 + protein_coding retained_intron MGP_LPJ_T0010373.1 MGP_LPJ_G0008491.1 mouse_genomes_project 2 7781409 7781511 + Gm24342 miRNA miRNA MGP_LPJ_T0098230.1 MGP_LPJ_G0036511.1 mouse_genomes_project 2 82063234 82063342 - Gm23900 rRNA rRNA MGP_LPJ_T0013376.1 MGP_LPJ_G0011467.1 mouse_genomes_project 2 2006903 2007214 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017755.1 MGP_LPJ_G0015359.1 mouse_genomes_project 2 94036652 94060055 + D930015M05Rik processed_transcript processed_transcript MGP_LPJ_T0013530.1 MGP_LPJ_G0011621.1 mouse_genomes_project 2 59709440 59710018 - processed_pseudogene processed_pseudogene MGP_LPJ_T0056310.1 MGP_LPJ_G0026146.1 mouse_genomes_project 2 105889243 105925652 - MGP_LPJ_P0056310 Caprin1 protein_coding protein_coding MGP_LPJ_T0056311.1 MGP_LPJ_G0026146.1 mouse_genomes_project 2 105891320 105925107 - MGP_LPJ_P0056311 Caprin1 protein_coding protein_coding MGP_LPJ_T0056312.1 MGP_LPJ_G0026146.1 mouse_genomes_project 2 105893522 105899192 - MGP_LPJ_P0056312 Caprin1 protein_coding protein_coding MGP_LPJ_T0056313.1 MGP_LPJ_G0026146.1 mouse_genomes_project 2 105894227 105898208 - MGP_LPJ_P0056313 Caprin1 protein_coding protein_coding MGP_LPJ_T0056314.1 MGP_LPJ_G0026146.1 mouse_genomes_project 2 105894865 105899095 - Caprin1 protein_coding retained_intron MGP_LPJ_T0056315.1 MGP_LPJ_G0026146.1 mouse_genomes_project 2 105898125 105900681 - Caprin1 protein_coding retained_intron MGP_LPJ_T0056316.1 MGP_LPJ_G0026146.1 mouse_genomes_project 2 105899159 105900123 - Caprin1 protein_coding processed_transcript MGP_LPJ_T0056317.1 MGP_LPJ_G0026146.1 mouse_genomes_project 2 105899408 105905823 - MGP_LPJ_P0056317 Caprin1 protein_coding protein_coding MGP_LPJ_T0056318.1 MGP_LPJ_G0026146.1 mouse_genomes_project 2 105899411 105902462 - Caprin1 protein_coding retained_intron MGP_LPJ_T0056319.1 MGP_LPJ_G0026146.1 mouse_genomes_project 2 105899882 105902108 - Caprin1 protein_coding processed_transcript MGP_LPJ_T0056320.1 MGP_LPJ_G0026146.1 mouse_genomes_project 2 105904417 105924936 - Caprin1 protein_coding processed_transcript MGP_LPJ_T0056321.1 MGP_LPJ_G0026146.1 mouse_genomes_project 2 105905978 105924547 - Caprin1 protein_coding processed_transcript MGP_LPJ_T0056322.1 MGP_LPJ_G0026146.1 mouse_genomes_project 2 105908682 105924976 - Caprin1 protein_coding retained_intron MGP_LPJ_T0056323.1 MGP_LPJ_G0026146.1 mouse_genomes_project 2 105909124 105924871 - Caprin1 protein_coding processed_transcript MGP_LPJ_T0056324.1 MGP_LPJ_G0026146.1 mouse_genomes_project 2 105924454 105925602 - Caprin1 protein_coding retained_intron MGP_LPJ_T0058170.1 MGP_LPJ_G0026604.1 mouse_genomes_project 2 157285029 157287230 + MGP_LPJ_P0058170 Defb21 protein_coding protein_coding MGP_LPJ_T0059197.1 MGP_LPJ_G0026837.1 mouse_genomes_project 2 172516933 172612099 + MGP_LPJ_P0059197 Arfgef2 protein_coding protein_coding MGP_LPJ_T0059198.1 MGP_LPJ_G0026837.1 mouse_genomes_project 2 172534634 172558325 + MGP_LPJ_P0059198 Arfgef2 protein_coding protein_coding MGP_LPJ_T0099374.1 MGP_LPJ_G0037637.1 mouse_genomes_project 2 188301348 188301455 + Gm25879 snRNA snRNA MGP_LPJ_T0059261.1 MGP_LPJ_G0026847.1 mouse_genomes_project 2 173235082 173245791 - MGP_LPJ_P0059261 Spata2 protein_coding protein_coding MGP_LPJ_T0059262.1 MGP_LPJ_G0026847.1 mouse_genomes_project 2 173237463 173238774 - Spata2 protein_coding retained_intron MGP_LPJ_T0059263.1 MGP_LPJ_G0026847.1 mouse_genomes_project 2 173238298 173245818 - Spata2 protein_coding processed_transcript MGP_LPJ_T0059264.1 MGP_LPJ_G0026847.1 mouse_genomes_project 2 173238349 173245791 - Spata2 protein_coding processed_transcript MGP_LPJ_T0059265.1 MGP_LPJ_G0026847.1 mouse_genomes_project 2 173238456 173245824 - Spata2 protein_coding processed_transcript MGP_LPJ_T0100629.1 MGP_LPJ_G0038892.1 mouse_genomes_project 2 155818474 155818610 + Gm23261 snoRNA snoRNA MGP_LPJ_T0011517.1 MGP_LPJ_G0009635.1 mouse_genomes_project 2 72395107 72395415 + Zakit misc_RNA misc_RNA MGP_LPJ_T0055616.1 MGP_LPJ_G0025900.1 mouse_genomes_project 2 87027947 87028910 - MGP_LPJ_P0055616 Olfr1048 protein_coding protein_coding MGP_LPJ_T0013735.1 MGP_LPJ_G0011826.1 mouse_genomes_project 2 140344680 140345322 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013383.1 MGP_LPJ_G0011474.1 mouse_genomes_project 2 5276592 5277246 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055906.1 MGP_LPJ_G0026081.1 mouse_genomes_project 2 92633701 92652273 + MGP_LPJ_P0055906 Mybpc3 protein_coding unknown_likely_coding MGP_LPJ_T0055907.1 MGP_LPJ_G0026081.1 mouse_genomes_project 2 92633895 92652272 + MGP_LPJ_P0055907 Mybpc3 protein_coding protein_coding MGP_LPJ_T0055908.1 MGP_LPJ_G0026081.1 mouse_genomes_project 2 92633895 92652266 + MGP_LPJ_P0055908 Mybpc3 protein_coding protein_coding MGP_LPJ_T0055909.1 MGP_LPJ_G0026081.1 mouse_genomes_project 2 92633895 92652266 + MGP_LPJ_P0055909 Mybpc3 protein_coding protein_coding MGP_LPJ_T0057308.1 MGP_LPJ_G0026384.1 mouse_genomes_project 2 130380815 130424060 - MGP_LPJ_P0057308 Sppl2a protein_coding protein_coding MGP_LPJ_T0057309.1 MGP_LPJ_G0026384.1 mouse_genomes_project 2 130384688 130411163 - MGP_LPJ_P0057309 Sppl2a protein_coding protein_coding MGP_LPJ_T0057310.1 MGP_LPJ_G0026384.1 mouse_genomes_project 2 130405691 130414518 - Sppl2a protein_coding retained_intron MGP_LPJ_T0058310.1 MGP_LPJ_G0026643.1 mouse_genomes_project 2 158950544 158958553 + MGP_LPJ_P0058310 Bpifa3 protein_coding protein_coding MGP_LPJ_T0058311.1 MGP_LPJ_G0026643.1 mouse_genomes_project 2 158950544 158958553 + MGP_LPJ_P0058311 Bpifa3 protein_coding protein_coding MGP_LPJ_T0058312.1 MGP_LPJ_G0026643.1 mouse_genomes_project 2 158955667 158957817 + MGP_LPJ_P0058312 Bpifa3 protein_coding nonsense_mediated_decay MGP_LPJ_T0010486.1 MGP_LPJ_G0008604.1 mouse_genomes_project 2 152497943 152498022 + Gm27420 miRNA miRNA MGP_LPJ_T0003947.1 MGP_LPJ_G0003526.1 mouse_genomes_project 2 25250756 25255349 + AA645442 antisense antisense MGP_LPJ_T0055816.1 MGP_LPJ_G0026065.1 mouse_genomes_project 2 91590411 91593493 - MGP_LPJ_P0055816 protein_coding protein_coding MGP_LPJ_T0003955.1 MGP_LPJ_G0003532.1 mouse_genomes_project 2 28990973 28994432 + 4930527E20Rik antisense antisense MGP_LPJ_T0057755.1 MGP_LPJ_G0026491.1 mouse_genomes_project 2 138659834 139376124 + MGP_LPJ_P0057755 Plcb1 protein_coding protein_coding MGP_LPJ_T0057756.1 MGP_LPJ_G0026491.1 mouse_genomes_project 2 138659926 139376135 + MGP_LPJ_P0057756 Plcb1 protein_coding protein_coding MGP_LPJ_T0057757.1 MGP_LPJ_G0026491.1 mouse_genomes_project 2 138659942 138876361 + Plcb1 protein_coding retained_intron MGP_LPJ_T0057758.1 MGP_LPJ_G0026491.1 mouse_genomes_project 2 138659996 139144343 + Plcb1 protein_coding retained_intron MGP_LPJ_T0057759.1 MGP_LPJ_G0026491.1 mouse_genomes_project 2 138660297 139295532 + MGP_LPJ_P0057759 Plcb1 protein_coding protein_coding MGP_LPJ_T0057760.1 MGP_LPJ_G0026491.1 mouse_genomes_project 2 139106995 139151930 + Plcb1 protein_coding processed_transcript MGP_LPJ_T0057761.1 MGP_LPJ_G0026491.1 mouse_genomes_project 2 139107042 139151935 + MGP_LPJ_P0057761 Plcb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0057762.1 MGP_LPJ_G0026491.1 mouse_genomes_project 2 139139689 139145232 + Plcb1 protein_coding processed_transcript MGP_LPJ_T0052764.1 MGP_LPJ_G0025340.1 mouse_genomes_project 2 22103588 22136518 + MGP_LPJ_P0052764 Psd4 protein_coding protein_coding MGP_LPJ_T0052765.1 MGP_LPJ_G0025340.1 mouse_genomes_project 2 22103618 22158150 + MGP_LPJ_P0052765 Psd4 protein_coding protein_coding MGP_LPJ_T0052766.1 MGP_LPJ_G0025340.1 mouse_genomes_project 2 22127591 22151925 + MGP_LPJ_P0052766 Psd4 protein_coding protein_coding MGP_LPJ_T0052767.1 MGP_LPJ_G0025340.1 mouse_genomes_project 2 22127594 22136671 + MGP_LPJ_P0052767 Psd4 protein_coding protein_coding MGP_LPJ_T0052768.1 MGP_LPJ_G0025340.1 mouse_genomes_project 2 22127595 22139580 + Psd4 protein_coding processed_transcript MGP_LPJ_T0052769.1 MGP_LPJ_G0025340.1 mouse_genomes_project 2 22127612 22136565 + MGP_LPJ_P0052769 Psd4 protein_coding protein_coding MGP_LPJ_T0052770.1 MGP_LPJ_G0025340.1 mouse_genomes_project 2 22128828 22136851 + MGP_LPJ_P0052770 Psd4 protein_coding protein_coding MGP_LPJ_T0052771.1 MGP_LPJ_G0025340.1 mouse_genomes_project 2 22128876 22151396 + MGP_LPJ_P0052771 Psd4 protein_coding protein_coding MGP_LPJ_T0052772.1 MGP_LPJ_G0025340.1 mouse_genomes_project 2 22144231 22146448 + MGP_LPJ_P0052772 Psd4 protein_coding nonsense_mediated_decay MGP_LPJ_T0052773.1 MGP_LPJ_G0025340.1 mouse_genomes_project 2 22148824 22150203 + Psd4 protein_coding retained_intron MGP_LPJ_T0057824.1 MGP_LPJ_G0026506.1 mouse_genomes_project 2 144247900 144280428 + MGP_LPJ_P0057824 Ndufaf5 protein_coding protein_coding MGP_LPJ_T0057825.1 MGP_LPJ_G0026506.1 mouse_genomes_project 2 144247964 144249566 + Ndufaf5 protein_coding retained_intron MGP_LPJ_T0057826.1 MGP_LPJ_G0026506.1 mouse_genomes_project 2 144248281 144280371 + Ndufaf5 protein_coding processed_transcript MGP_LPJ_T0098522.1 MGP_LPJ_G0036797.1 mouse_genomes_project 2 1336905 1339368 + Gm36988 sense_intronic sense_intronic MGP_LPJ_T0013828.1 MGP_LPJ_G0011919.1 mouse_genomes_project 2 174077872 174078309 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100644.1 MGP_LPJ_G0038907.1 mouse_genomes_project 2 172786863 172786956 + Gm25878 snoRNA snoRNA MGP_LPJ_T0057884.1 MGP_LPJ_G0026522.1 mouse_genomes_project 2 148611485 148617610 + MGP_LPJ_P0057884 Pet117 protein_coding protein_coding MGP_LPJ_T0100612.1 MGP_LPJ_G0038875.1 mouse_genomes_project 2 132361178 132361560 + Gm23172 snoRNA snoRNA MGP_LPJ_T0055150.1 MGP_LPJ_G0025762.1 mouse_genomes_project 2 72549893 72560273 + MGP_LPJ_P0055150 Cdca7 protein_coding protein_coding MGP_LPJ_T0055151.1 MGP_LPJ_G0025762.1 mouse_genomes_project 2 72549987 72556232 + MGP_LPJ_P0055151 Cdca7 protein_coding protein_coding MGP_LPJ_T0055152.1 MGP_LPJ_G0025762.1 mouse_genomes_project 2 72550124 72555595 + Cdca7 protein_coding processed_transcript MGP_LPJ_T0055153.1 MGP_LPJ_G0025762.1 mouse_genomes_project 2 72557298 72558478 + Cdca7 protein_coding processed_transcript MGP_LPJ_T0055154.1 MGP_LPJ_G0025762.1 mouse_genomes_project 2 72558841 72559933 + Cdca7 protein_coding processed_transcript MGP_LPJ_T0055761.1 MGP_LPJ_G0026029.1 mouse_genomes_project 2 90574501 90575520 - MGP_LPJ_P0055761 Olfr1229 protein_coding protein_coding MGP_LPJ_T0055762.1 MGP_LPJ_G0026029.1 mouse_genomes_project 2 90574558 90580318 - MGP_LPJ_P0055762 Olfr1229 protein_coding protein_coding MGP_LPJ_T0098022.1 MGP_LPJ_G0036303.1 mouse_genomes_project 2 12040050 12040672 - pseudogene pseudogene MGP_LPJ_T0100647.1 MGP_LPJ_G0038910.1 mouse_genomes_project 2 174188058 174188195 + Gm22704 snoRNA snoRNA MGP_LPJ_T0011532.1 MGP_LPJ_G0009650.1 mouse_genomes_project 2 151717005 151717463 + Nkx2-2os misc_RNA misc_RNA MGP_LPJ_T0058059.1 MGP_LPJ_G0026570.1 mouse_genomes_project 2 155496254 155521234 + Gins1 protein_coding processed_transcript MGP_LPJ_T0058060.1 MGP_LPJ_G0026570.1 mouse_genomes_project 2 155500448 155526562 + MGP_LPJ_P0058060 Gins1 protein_coding protein_coding MGP_LPJ_T0058061.1 MGP_LPJ_G0026570.1 mouse_genomes_project 2 155500471 155521428 + Gins1 protein_coding processed_transcript MGP_LPJ_T0058062.1 MGP_LPJ_G0026570.1 mouse_genomes_project 2 155504957 155522870 + Gins1 protein_coding processed_transcript MGP_LPJ_T0013773.1 MGP_LPJ_G0011864.1 mouse_genomes_project 2 154628108 154629103 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102008.1 MGP_LPJ_G0040045.1 mouse_genomes_project 2 21989626 21995447 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0053153.1 MGP_LPJ_G0025409.1 mouse_genomes_project 2 24087324 24095402 - MGP_LPJ_P0053153 Lhx3 protein_coding protein_coding MGP_LPJ_T0053154.1 MGP_LPJ_G0025409.1 mouse_genomes_project 2 24087328 24089979 - Lhx3 protein_coding retained_intron MGP_LPJ_T0053155.1 MGP_LPJ_G0025409.1 mouse_genomes_project 2 24087328 24093688 - MGP_LPJ_P0053155 Lhx3 protein_coding protein_coding MGP_LPJ_T0053156.1 MGP_LPJ_G0025409.1 mouse_genomes_project 2 24089588 24090554 - Lhx3 protein_coding retained_intron MGP_LPJ_T0001100.1 MGP_LPJ_G0001025.1 mouse_genomes_project 2 36633889 36637839 - TEC TEC MGP_LPJ_T0001104.1 MGP_LPJ_G0001029.1 mouse_genomes_project 2 37171898 37174496 - TEC TEC MGP_LPJ_T0013837.1 MGP_LPJ_G0011928.1 mouse_genomes_project 2 185450385 185451397 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010363.1 MGP_LPJ_G0008481.1 mouse_genomes_project 2 7730791 7730881 + Mir297a-2 miRNA miRNA MGP_LPJ_T0013422.1 MGP_LPJ_G0011513.1 mouse_genomes_project 2 20373483 20373844 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099363.1 MGP_LPJ_G0037626.1 mouse_genomes_project 2 157117610 157117673 + Gm27343 snRNA snRNA MGP_LPJ_T0013377.1 MGP_LPJ_G0011468.1 mouse_genomes_project 2 2020441 2020666 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007400.1 MGP_LPJ_G0006070.1 mouse_genomes_project 2 171212440 171212765 - Gm28163 lincRNA lincRNA MGP_LPJ_T0056095.1 MGP_LPJ_G0026104.1 mouse_genomes_project 2 94001402 94007943 + Pex16 protein_coding processed_transcript MGP_LPJ_T0056096.1 MGP_LPJ_G0026104.1 mouse_genomes_project 2 94002032 94007944 + MGP_LPJ_P0056096 Pex16 protein_coding protein_coding MGP_LPJ_T0056097.1 MGP_LPJ_G0026104.1 mouse_genomes_project 2 94002219 94006048 + Pex16 protein_coding processed_transcript MGP_LPJ_T0056098.1 MGP_LPJ_G0026104.1 mouse_genomes_project 2 94002285 94003430 + Pex16 protein_coding processed_transcript MGP_LPJ_T0013637.1 MGP_LPJ_G0011728.1 mouse_genomes_project 2 96347037 96347638 - processed_pseudogene processed_pseudogene MGP_LPJ_T0055824.1 MGP_LPJ_G0026069.1 mouse_genomes_project 2 92152876 92217364 + MGP_LPJ_P0055824 Nup160 protein_coding protein_coding MGP_LPJ_T0055825.1 MGP_LPJ_G0026069.1 mouse_genomes_project 2 92160820 92168639 + Nup160 protein_coding processed_transcript MGP_LPJ_T0055826.1 MGP_LPJ_G0026069.1 mouse_genomes_project 2 92165232 92170359 + Nup160 protein_coding processed_transcript MGP_LPJ_T0055827.1 MGP_LPJ_G0026069.1 mouse_genomes_project 2 92166215 92182525 + Nup160 protein_coding processed_transcript MGP_LPJ_T0055828.1 MGP_LPJ_G0026069.1 mouse_genomes_project 2 92179454 92181781 + Nup160 protein_coding processed_transcript MGP_LPJ_T0055829.1 MGP_LPJ_G0026069.1 mouse_genomes_project 2 92198736 92199089 + Nup160 protein_coding processed_transcript MGP_LPJ_T0055830.1 MGP_LPJ_G0026069.1 mouse_genomes_project 2 92213759 92216820 + Nup160 protein_coding processed_transcript MGP_LPJ_T0003894.1 MGP_LPJ_G0003487.1 mouse_genomes_project 2 443561 449489 + Gm13184 antisense antisense MGP_LPJ_T0057541.1 MGP_LPJ_G0026444.1 mouse_genomes_project 2 134161438 134265336 + MGP_LPJ_P0057541 Ptpra protein_coding protein_coding MGP_LPJ_T0057542.1 MGP_LPJ_G0026444.1 mouse_genomes_project 2 134161704 134265333 + MGP_LPJ_P0057542 Ptpra protein_coding protein_coding MGP_LPJ_T0057543.1 MGP_LPJ_G0026444.1 mouse_genomes_project 2 134215437 134264778 + MGP_LPJ_P0057543 Ptpra protein_coding unknown_likely_coding MGP_LPJ_T0010508.1 MGP_LPJ_G0008626.1 mouse_genomes_project 2 180523943 180524025 - Mir298 miRNA miRNA MGP_LPJ_T0017858.1 MGP_LPJ_G0015404.1 mouse_genomes_project 2 168059669 168065474 + 9430021M05Rik processed_transcript processed_transcript MGP_LPJ_T0001097.1 MGP_LPJ_G0001022.1 mouse_genomes_project 2 34437243 34440231 + TEC TEC MGP_LPJ_T0054236.1 MGP_LPJ_G0025579.1 mouse_genomes_project 2 33628949 33649382 - MGP_LPJ_P0054236 AI182371 protein_coding unknown_likely_coding MGP_LPJ_T0054237.1 MGP_LPJ_G0025579.1 mouse_genomes_project 2 33630364 33649414 - MGP_LPJ_P0054237 AI182371 protein_coding protein_coding MGP_LPJ_T0054238.1 MGP_LPJ_G0025579.1 mouse_genomes_project 2 33632242 33649413 - MGP_LPJ_P0054238 AI182371 protein_coding nonsense_mediated_decay MGP_LPJ_T0054239.1 MGP_LPJ_G0025579.1 mouse_genomes_project 2 33632583 33639998 - AI182371 protein_coding processed_transcript MGP_LPJ_T0054240.1 MGP_LPJ_G0025579.1 mouse_genomes_project 2 33635284 33650272 - AI182371 protein_coding processed_transcript MGP_LPJ_T0059024.1 MGP_LPJ_G0026806.1 mouse_genomes_project 2 170326035 170329045 + MGP_LPJ_P0059024 Ube2c protein_coding protein_coding MGP_LPJ_T0059025.1 MGP_LPJ_G0026806.1 mouse_genomes_project 2 170326040 170334519 + MGP_LPJ_P0059025 Ube2c protein_coding protein_coding MGP_LPJ_T0055789.1 MGP_LPJ_G0026049.1 mouse_genomes_project 2 91113403 91114528 - MGP_LPJ_P0055789 protein_coding protein_coding MGP_LPJ_T0013604.1 MGP_LPJ_G0011695.1 mouse_genomes_project 2 86580312 86580508 - processed_pseudogene processed_pseudogene MGP_LPJ_T0053414.1 MGP_LPJ_G0025457.1 mouse_genomes_project 2 26572684 26580248 - MGP_LPJ_P0053414 Cel protein_coding protein_coding MGP_LPJ_T0053415.1 MGP_LPJ_G0025457.1 mouse_genomes_project 2 26577406 26580289 - Cel protein_coding processed_transcript MGP_LPJ_T0007254.1 MGP_LPJ_G0005951.1 mouse_genomes_project 2 75644399 75652522 + Gm13658 lincRNA lincRNA MGP_LPJ_T0007420.1 MGP_LPJ_G0006086.1 mouse_genomes_project 2 173982226 173984137 - E130018N17Rik lincRNA lincRNA MGP_LPJ_T0053526.1 MGP_LPJ_G0025477.1 mouse_genomes_project 2 27959093 27961285 + MGP_LPJ_P0053526 Cercam protein_coding protein_coding MGP_LPJ_T0053527.1 MGP_LPJ_G0025477.1 mouse_genomes_project 2 27959423 27976990 + MGP_LPJ_P0053527 Cercam protein_coding protein_coding MGP_LPJ_T0053528.1 MGP_LPJ_G0025477.1 mouse_genomes_project 2 27959473 27961239 + MGP_LPJ_P0053528 Cercam protein_coding protein_coding MGP_LPJ_T0053529.1 MGP_LPJ_G0025477.1 mouse_genomes_project 2 27968409 27972319 + Cercam protein_coding retained_intron MGP_LPJ_T0053530.1 MGP_LPJ_G0025477.1 mouse_genomes_project 2 27968955 27975087 + Cercam protein_coding retained_intron MGP_LPJ_T0004005.1 MGP_LPJ_G0003572.1 mouse_genomes_project 2 67216356 67243051 - Gm13601 antisense antisense MGP_LPJ_T0052554.1 MGP_LPJ_G0025298.1 mouse_genomes_project 2 13829078 14237965 + MGP_LPJ_P0052554 Plxdc2 protein_coding unknown_likely_coding MGP_LPJ_T0052555.1 MGP_LPJ_G0025298.1 mouse_genomes_project 2 13829895 14238347 + MGP_LPJ_P0052555 Plxdc2 protein_coding protein_coding MGP_LPJ_T0052556.1 MGP_LPJ_G0025298.1 mouse_genomes_project 2 13830125 14238515 + MGP_LPJ_P0052556 Plxdc2 protein_coding protein_coding MGP_LPJ_T0052557.1 MGP_LPJ_G0025298.1 mouse_genomes_project 2 14116740 14238348 + Plxdc2 protein_coding processed_transcript MGP_LPJ_T0055634.1 MGP_LPJ_G0025917.1 mouse_genomes_project 2 87614842 87615775 - MGP_LPJ_P0055634 Olfr1086 protein_coding protein_coding MGP_LPJ_T0098237.1 MGP_LPJ_G0036518.1 mouse_genomes_project 2 122713950 122714069 + n-R5s204 rRNA rRNA MGP_LPJ_T0057786.1 MGP_LPJ_G0026495.1 mouse_genomes_project 2 140451479 140465085 + protein_coding processed_transcript MGP_LPJ_T0057787.1 MGP_LPJ_G0026495.1 mouse_genomes_project 2 140451524 140456317 + protein_coding processed_transcript MGP_LPJ_T0057788.1 MGP_LPJ_G0026495.1 mouse_genomes_project 2 140451560 140503407 + MGP_LPJ_P0057788 protein_coding nonsense_mediated_decay MGP_LPJ_T0057789.1 MGP_LPJ_G0026495.1 mouse_genomes_project 2 140451750 140463784 + protein_coding processed_transcript MGP_LPJ_T0057790.1 MGP_LPJ_G0026495.1 mouse_genomes_project 2 140465088 140502107 + MGP_LPJ_P0057790 protein_coding protein_coding MGP_LPJ_T0057791.1 MGP_LPJ_G0026495.1 mouse_genomes_project 2 140483656 140507809 + MGP_LPJ_P0057791 protein_coding unknown_likely_coding MGP_LPJ_T0057792.1 MGP_LPJ_G0026495.1 mouse_genomes_project 2 140504899 140505695 + protein_coding processed_transcript MGP_LPJ_T0057793.1 MGP_LPJ_G0026495.1 mouse_genomes_project 2 140504914 140507869 + protein_coding processed_transcript MGP_LPJ_T0058903.1 MGP_LPJ_G0026760.1 mouse_genomes_project 2 168988555 169029244 + MGP_LPJ_P0058903 Hnf4a protein_coding protein_coding MGP_LPJ_T0058904.1 MGP_LPJ_G0026760.1 mouse_genomes_project 2 169023437 169035750 + Hnf4a protein_coding processed_transcript MGP_LPJ_T0058905.1 MGP_LPJ_G0026760.1 mouse_genomes_project 2 169023806 169050574 + MGP_LPJ_P0058905 Hnf4a protein_coding protein_coding MGP_LPJ_T0058906.1 MGP_LPJ_G0026760.1 mouse_genomes_project 2 169023807 169050569 + MGP_LPJ_P0058906 Hnf4a protein_coding protein_coding MGP_LPJ_T0058907.1 MGP_LPJ_G0026760.1 mouse_genomes_project 2 169026746 169035749 + MGP_LPJ_P0058907 Hnf4a protein_coding protein_coding MGP_LPJ_T0059233.1 MGP_LPJ_G0026842.1 mouse_genomes_project 2 172786324 172789047 + protein_coding antisense MGP_LPJ_T0059234.1 MGP_LPJ_G0026842.1 mouse_genomes_project 2 172786324 172789046 + MGP_LPJ_P0059234 protein_coding protein_coding MGP_LPJ_T0059235.1 MGP_LPJ_G0026842.1 mouse_genomes_project 2 172786325 172788759 + protein_coding retained_intron MGP_LPJ_T0059236.1 MGP_LPJ_G0026842.1 mouse_genomes_project 2 172786611 172788567 + protein_coding retained_intron MGP_LPJ_T0059237.1 MGP_LPJ_G0026842.1 mouse_genomes_project 2 172786613 172788907 + protein_coding retained_intron MGP_LPJ_T0059238.1 MGP_LPJ_G0026842.1 mouse_genomes_project 2 172787039 172789047 + protein_coding retained_intron MGP_LPJ_T0052165.1 MGP_LPJ_G0025234.1 mouse_genomes_project 2 302143 305836 - MGP_LPJ_P0052165 Rpp38 protein_coding protein_coding MGP_LPJ_T0007288.1 MGP_LPJ_G0005979.1 mouse_genomes_project 2 103922611 103933872 + Gm13905 lincRNA lincRNA MGP_LPJ_T0057219.1 MGP_LPJ_G0026362.1 mouse_genomes_project 2 128499481 128528676 - MGP_LPJ_P0057219 protein_coding protein_coding MGP_LPJ_T0010500.1 MGP_LPJ_G0008618.1 mouse_genomes_project 2 173884398 173884476 - Gm24327 miRNA miRNA MGP_LPJ_T0056158.1 MGP_LPJ_G0026118.1 mouse_genomes_project 2 95542708 95561966 - MGP_LPJ_P0056158 Accs protein_coding protein_coding MGP_LPJ_T0056159.1 MGP_LPJ_G0026118.1 mouse_genomes_project 2 95544684 95561704 - MGP_LPJ_P0056159 Accs protein_coding protein_coding MGP_LPJ_T0056160.1 MGP_LPJ_G0026118.1 mouse_genomes_project 2 95544684 95561824 - MGP_LPJ_P0056160 Accs protein_coding protein_coding MGP_LPJ_T0056161.1 MGP_LPJ_G0026118.1 mouse_genomes_project 2 95545234 95548558 - Accs protein_coding retained_intron MGP_LPJ_T0056162.1 MGP_LPJ_G0026118.1 mouse_genomes_project 2 95546265 95561968 - Accs protein_coding retained_intron MGP_LPJ_T0056163.1 MGP_LPJ_G0026118.1 mouse_genomes_project 2 95547257 95559956 - MGP_LPJ_P0056163 Accs protein_coding nonsense_mediated_decay MGP_LPJ_T0056164.1 MGP_LPJ_G0026118.1 mouse_genomes_project 2 95548391 95551467 - Accs protein_coding retained_intron MGP_LPJ_T0056165.1 MGP_LPJ_G0026118.1 mouse_genomes_project 2 95550478 95551580 - Accs protein_coding retained_intron MGP_LPJ_T0056166.1 MGP_LPJ_G0026118.1 mouse_genomes_project 2 95551767 95561841 - MGP_LPJ_P0056166 Accs protein_coding protein_coding MGP_LPJ_T0056167.1 MGP_LPJ_G0026118.1 mouse_genomes_project 2 95551996 95561964 - Accs protein_coding retained_intron MGP_LPJ_T0056168.1 MGP_LPJ_G0026118.1 mouse_genomes_project 2 95552007 95561964 - Accs protein_coding retained_intron MGP_LPJ_T0056169.1 MGP_LPJ_G0026118.1 mouse_genomes_project 2 95557083 95557811 - Accs protein_coding processed_transcript MGP_LPJ_T0058877.1 MGP_LPJ_G0026752.1 mouse_genomes_project 2 168490990 168532729 + MGP_LPJ_P0058877 Mybl2 protein_coding protein_coding MGP_LPJ_T0058878.1 MGP_LPJ_G0026752.1 mouse_genomes_project 2 168498561 168504247 + Mybl2 protein_coding processed_transcript MGP_LPJ_T0058879.1 MGP_LPJ_G0026752.1 mouse_genomes_project 2 168508864 168513761 + Mybl2 protein_coding retained_intron MGP_LPJ_T0058880.1 MGP_LPJ_G0026752.1 mouse_genomes_project 2 168515362 168530757 + MGP_LPJ_P0058880 Mybl2 protein_coding protein_coding MGP_LPJ_T0058881.1 MGP_LPJ_G0026752.1 mouse_genomes_project 2 168515770 168527623 + Mybl2 protein_coding retained_intron MGP_LPJ_T0058477.1 MGP_LPJ_G0026684.1 mouse_genomes_project 2 160835768 160926458 - Uqcc1 protein_coding processed_transcript MGP_LPJ_T0058478.1 MGP_LPJ_G0026684.1 mouse_genomes_project 2 160835768 160926458 - MGP_LPJ_P0058478 Uqcc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0058479.1 MGP_LPJ_G0026684.1 mouse_genomes_project 2 160835770 160926434 - MGP_LPJ_P0058479 Uqcc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0058480.1 MGP_LPJ_G0026684.1 mouse_genomes_project 2 160835770 160926441 - MGP_LPJ_P0058480 Uqcc1 protein_coding protein_coding MGP_LPJ_T0058481.1 MGP_LPJ_G0026684.1 mouse_genomes_project 2 160835795 160926708 - MGP_LPJ_P0058481 Uqcc1 protein_coding protein_coding MGP_LPJ_T0058482.1 MGP_LPJ_G0026684.1 mouse_genomes_project 2 160836821 160926416 - MGP_LPJ_P0058482 Uqcc1 protein_coding protein_coding MGP_LPJ_T0058483.1 MGP_LPJ_G0026684.1 mouse_genomes_project 2 160837058 160840573 - Uqcc1 protein_coding processed_transcript MGP_LPJ_T0058484.1 MGP_LPJ_G0026684.1 mouse_genomes_project 2 160837115 160926442 - MGP_LPJ_P0058484 Uqcc1 protein_coding protein_coding MGP_LPJ_T0058485.1 MGP_LPJ_G0026684.1 mouse_genomes_project 2 160837134 160926708 - MGP_LPJ_P0058485 Uqcc1 protein_coding protein_coding MGP_LPJ_T0058486.1 MGP_LPJ_G0026684.1 mouse_genomes_project 2 160837325 160926430 - MGP_LPJ_P0058486 Uqcc1 protein_coding protein_coding MGP_LPJ_T0058487.1 MGP_LPJ_G0026684.1 mouse_genomes_project 2 160839783 160926661 - Uqcc1 protein_coding retained_intron MGP_LPJ_T0058488.1 MGP_LPJ_G0026684.1 mouse_genomes_project 2 160840247 160926441 - MGP_LPJ_P0058488 Uqcc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0058489.1 MGP_LPJ_G0026684.1 mouse_genomes_project 2 160846697 160926448 - Uqcc1 protein_coding retained_intron MGP_LPJ_T0058490.1 MGP_LPJ_G0026684.1 mouse_genomes_project 2 160860990 160926454 - Uqcc1 protein_coding processed_transcript MGP_LPJ_T0058491.1 MGP_LPJ_G0026684.1 mouse_genomes_project 2 160883776 160926458 - MGP_LPJ_P0058491 Uqcc1 protein_coding protein_coding MGP_LPJ_T0058492.1 MGP_LPJ_G0026684.1 mouse_genomes_project 2 160883788 160908184 - Uqcc1 protein_coding retained_intron MGP_LPJ_T0058493.1 MGP_LPJ_G0026684.1 mouse_genomes_project 2 160883795 160926674 - Uqcc1 protein_coding processed_transcript MGP_LPJ_T0058494.1 MGP_LPJ_G0026684.1 mouse_genomes_project 2 160905552 160926444 - Uqcc1 protein_coding retained_intron MGP_LPJ_T0058495.1 MGP_LPJ_G0026684.1 mouse_genomes_project 2 160906943 160926448 - MGP_LPJ_P0058495 Uqcc1 protein_coding protein_coding MGP_LPJ_T0056890.1 MGP_LPJ_G0026303.1 mouse_genomes_project 2 123582412 123632601 + Capn3 protein_coding processed_transcript MGP_LPJ_T0056891.1 MGP_LPJ_G0026303.1 mouse_genomes_project 2 123582412 123632461 + Capn3 protein_coding processed_transcript MGP_LPJ_T0056892.1 MGP_LPJ_G0026303.1 mouse_genomes_project 2 123590091 123632601 + MGP_LPJ_P0056892 Capn3 protein_coding protein_coding MGP_LPJ_T0056893.1 MGP_LPJ_G0026303.1 mouse_genomes_project 2 123590091 123632601 + MGP_LPJ_P0056893 Capn3 protein_coding protein_coding MGP_LPJ_T0056894.1 MGP_LPJ_G0026303.1 mouse_genomes_project 2 123590385 123632187 + MGP_LPJ_P0056894 Capn3 protein_coding unknown_likely_coding MGP_LPJ_T0056895.1 MGP_LPJ_G0026303.1 mouse_genomes_project 2 123603422 123632601 + MGP_LPJ_P0056895 Capn3 protein_coding protein_coding MGP_LPJ_T0056896.1 MGP_LPJ_G0026303.1 mouse_genomes_project 2 123603424 123632601 + MGP_LPJ_P0056896 Capn3 protein_coding protein_coding MGP_LPJ_T0056897.1 MGP_LPJ_G0026303.1 mouse_genomes_project 2 123603474 123632601 + MGP_LPJ_P0056897 Capn3 protein_coding protein_coding MGP_LPJ_T0056898.1 MGP_LPJ_G0026303.1 mouse_genomes_project 2 123603480 123632202 + Capn3 protein_coding processed_transcript MGP_LPJ_T0056899.1 MGP_LPJ_G0026303.1 mouse_genomes_project 2 123603480 123632601 + MGP_LPJ_P0056899 Capn3 protein_coding protein_coding MGP_LPJ_T0056900.1 MGP_LPJ_G0026303.1 mouse_genomes_project 2 123611059 123611334 + Capn3 protein_coding processed_transcript MGP_LPJ_T0056901.1 MGP_LPJ_G0026303.1 mouse_genomes_project 2 123627932 123630905 + Capn3 protein_coding processed_transcript MGP_LPJ_T0056902.1 MGP_LPJ_G0026303.1 mouse_genomes_project 2 123628920 123630730 + Capn3 protein_coding processed_transcript MGP_LPJ_T0056903.1 MGP_LPJ_G0026303.1 mouse_genomes_project 2 123628994 123631083 + Capn3 protein_coding processed_transcript MGP_LPJ_T0054231.1 MGP_LPJ_G0025578.1 mouse_genomes_project 2 33524460 33607961 - MGP_LPJ_P0054231 Hc protein_coding protein_coding MGP_LPJ_T0054232.1 MGP_LPJ_G0025578.1 mouse_genomes_project 2 33524832 33560709 - MGP_LPJ_P0054232 Hc protein_coding protein_coding MGP_LPJ_T0054233.1 MGP_LPJ_G0025578.1 mouse_genomes_project 2 33532318 33534433 - Hc protein_coding processed_transcript MGP_LPJ_T0054234.1 MGP_LPJ_G0025578.1 mouse_genomes_project 2 33532412 33541927 - Hc protein_coding retained_intron MGP_LPJ_T0054235.1 MGP_LPJ_G0025578.1 mouse_genomes_project 2 33536055 33547402 - Hc protein_coding processed_transcript MGP_LPJ_T0054841.1 MGP_LPJ_G0025703.1 mouse_genomes_project 2 62115702 62170361 - MGP_LPJ_P0054841 Ifih1 protein_coding protein_coding MGP_LPJ_T0054842.1 MGP_LPJ_G0025703.1 mouse_genomes_project 2 62117351 62170303 - MGP_LPJ_P0054842 Ifih1 protein_coding protein_coding MGP_LPJ_T0054843.1 MGP_LPJ_G0025703.1 mouse_genomes_project 2 62129331 62170405 - Ifih1 protein_coding retained_intron MGP_LPJ_T0054844.1 MGP_LPJ_G0025703.1 mouse_genomes_project 2 62152671 62163623 - Ifih1 protein_coding processed_transcript MGP_LPJ_T0054845.1 MGP_LPJ_G0025703.1 mouse_genomes_project 2 62156706 62170308 - Ifih1 protein_coding retained_intron MGP_LPJ_T0013650.1 MGP_LPJ_G0011741.1 mouse_genomes_project 2 104235577 104236019 + processed_pseudogene processed_pseudogene MGP_LPJ_T0058313.1 MGP_LPJ_G0026644.1 mouse_genomes_project 2 158963096 158969456 + MGP_LPJ_P0058313 Bpifa1 protein_coding protein_coding MGP_LPJ_T0058314.1 MGP_LPJ_G0026644.1 mouse_genomes_project 2 158963115 158965421 + Bpifa1 protein_coding processed_transcript MGP_LPJ_T0058315.1 MGP_LPJ_G0026644.1 mouse_genomes_project 2 158964592 158967984 + Bpifa1 protein_coding processed_transcript MGP_LPJ_T0007174.1 MGP_LPJ_G0005886.1 mouse_genomes_project 2 24022556 24023554 + 1810012K08Rik lincRNA lincRNA MGP_LPJ_T0055810.1 MGP_LPJ_G0026060.1 mouse_genomes_project 2 91401163 91403203 + MGP_LPJ_P0055810 protein_coding protein_coding MGP_LPJ_T0013400.1 MGP_LPJ_G0011491.1 mouse_genomes_project 2 12827765 12828735 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004035.1 MGP_LPJ_G0003592.1 mouse_genomes_project 2 77001531 77068151 + Gm13938 antisense antisense MGP_LPJ_T0010383.1 MGP_LPJ_G0008501.1 mouse_genomes_project 2 7785808 7785906 + Mir669m-2 miRNA miRNA MGP_LPJ_T0017852.1 MGP_LPJ_G0015401.1 mouse_genomes_project 2 163769640 163787755 - Gm14204 processed_transcript processed_transcript MGP_LPJ_T0017853.1 MGP_LPJ_G0015401.1 mouse_genomes_project 2 163772341 163787819 - Gm14204 processed_transcript processed_transcript MGP_LPJ_T0017854.1 MGP_LPJ_G0015401.1 mouse_genomes_project 2 163778399 163787702 - Gm14204 processed_transcript processed_transcript MGP_LPJ_T0017855.1 MGP_LPJ_G0015401.1 mouse_genomes_project 2 163778538 163787686 - Gm14204 processed_transcript processed_transcript MGP_LPJ_T0013834.1 MGP_LPJ_G0011925.1 mouse_genomes_project 2 180297779 180298434 - processed_pseudogene processed_pseudogene MGP_LPJ_T0059630.1 MGP_LPJ_G0026942.1 mouse_genomes_project 2 187660247 187721030 - MGP_LPJ_P0059630 Kcnq2 protein_coding protein_coding MGP_LPJ_T0059631.1 MGP_LPJ_G0026942.1 mouse_genomes_project 2 187660248 187721152 - MGP_LPJ_P0059631 Kcnq2 protein_coding protein_coding MGP_LPJ_T0059632.1 MGP_LPJ_G0026942.1 mouse_genomes_project 2 187660248 187721238 - MGP_LPJ_P0059632 Kcnq2 protein_coding protein_coding MGP_LPJ_T0059633.1 MGP_LPJ_G0026942.1 mouse_genomes_project 2 187660255 187721065 - MGP_LPJ_P0059633 Kcnq2 protein_coding protein_coding MGP_LPJ_T0059634.1 MGP_LPJ_G0026942.1 mouse_genomes_project 2 187660257 187721115 - MGP_LPJ_P0059634 Kcnq2 protein_coding protein_coding MGP_LPJ_T0059635.1 MGP_LPJ_G0026942.1 mouse_genomes_project 2 187660257 187721115 - MGP_LPJ_P0059635 Kcnq2 protein_coding protein_coding MGP_LPJ_T0059636.1 MGP_LPJ_G0026942.1 mouse_genomes_project 2 187660257 187721115 - MGP_LPJ_P0059636 Kcnq2 protein_coding protein_coding MGP_LPJ_T0059637.1 MGP_LPJ_G0026942.1 mouse_genomes_project 2 187660257 187721115 - MGP_LPJ_P0059637 Kcnq2 protein_coding protein_coding MGP_LPJ_T0059638.1 MGP_LPJ_G0026942.1 mouse_genomes_project 2 187665168 187699532 - MGP_LPJ_P0059638 Kcnq2 protein_coding protein_coding MGP_LPJ_T0059639.1 MGP_LPJ_G0026942.1 mouse_genomes_project 2 187665568 187721069 - MGP_LPJ_P0059639 Kcnq2 protein_coding protein_coding MGP_LPJ_T0059640.1 MGP_LPJ_G0026942.1 mouse_genomes_project 2 187667072 187694490 - MGP_LPJ_P0059640 Kcnq2 protein_coding protein_coding MGP_LPJ_T0059641.1 MGP_LPJ_G0026942.1 mouse_genomes_project 2 187667122 187680091 - Kcnq2 protein_coding processed_transcript MGP_LPJ_T0059642.1 MGP_LPJ_G0026942.1 mouse_genomes_project 2 187669251 187685468 - Kcnq2 protein_coding retained_intron MGP_LPJ_T0059643.1 MGP_LPJ_G0026942.1 mouse_genomes_project 2 187670647 187721115 - Kcnq2 protein_coding retained_intron MGP_LPJ_T0059644.1 MGP_LPJ_G0026942.1 mouse_genomes_project 2 187680910 187721115 - Kcnq2 protein_coding retained_intron MGP_LPJ_T0059645.1 MGP_LPJ_G0026942.1 mouse_genomes_project 2 187681135 187721115 - Kcnq2 protein_coding retained_intron MGP_LPJ_T0059646.1 MGP_LPJ_G0026942.1 mouse_genomes_project 2 187693177 187721115 - Kcnq2 protein_coding processed_transcript MGP_LPJ_T0059647.1 MGP_LPJ_G0026942.1 mouse_genomes_project 2 187693177 187721181 - Kcnq2 protein_coding retained_intron MGP_LPJ_T0059648.1 MGP_LPJ_G0026942.1 mouse_genomes_project 2 187693177 187721115 - Kcnq2 protein_coding retained_intron MGP_LPJ_T0059649.1 MGP_LPJ_G0026942.1 mouse_genomes_project 2 187693177 187721115 - Kcnq2 protein_coding retained_intron MGP_LPJ_T0053042.1 MGP_LPJ_G0025383.1 mouse_genomes_project 2 23332458 23337651 + MGP_LPJ_P0053042 Fbxw5 protein_coding protein_coding MGP_LPJ_T0053043.1 MGP_LPJ_G0025383.1 mouse_genomes_project 2 23332995 23335730 + Fbxw5 protein_coding processed_transcript MGP_LPJ_T0053044.1 MGP_LPJ_G0025383.1 mouse_genomes_project 2 23332997 23335993 + Fbxw5 protein_coding processed_transcript MGP_LPJ_T0053045.1 MGP_LPJ_G0025383.1 mouse_genomes_project 2 23333038 23335366 + Fbxw5 protein_coding processed_transcript MGP_LPJ_T0053046.1 MGP_LPJ_G0025383.1 mouse_genomes_project 2 23333058 23335784 + Fbxw5 protein_coding processed_transcript MGP_LPJ_T0053047.1 MGP_LPJ_G0025383.1 mouse_genomes_project 2 23334737 23335764 + Fbxw5 protein_coding processed_transcript MGP_LPJ_T0053048.1 MGP_LPJ_G0025383.1 mouse_genomes_project 2 23335217 23335980 + Fbxw5 protein_coding processed_transcript MGP_LPJ_T0053049.1 MGP_LPJ_G0025383.1 mouse_genomes_project 2 23335405 23337014 + MGP_LPJ_P0053049 Fbxw5 protein_coding protein_coding MGP_LPJ_T0053050.1 MGP_LPJ_G0025383.1 mouse_genomes_project 2 23336086 23337125 + Fbxw5 protein_coding processed_transcript MGP_LPJ_T0056582.1 MGP_LPJ_G0026237.1 mouse_genomes_project 2 116825836 116831431 - MGP_LPJ_P0056582 Actc1 protein_coding protein_coding MGP_LPJ_T0056583.1 MGP_LPJ_G0026237.1 mouse_genomes_project 2 116830457 116832092 - MGP_LPJ_P0056583 Actc1 protein_coding protein_coding MGP_LPJ_T0013512.1 MGP_LPJ_G0011603.1 mouse_genomes_project 2 55115406 55116667 + processed_pseudogene processed_pseudogene MGP_LPJ_T0055701.1 MGP_LPJ_G0025974.1 mouse_genomes_project 2 89082145 89083084 - MGP_LPJ_P0055701 Olfr1157 protein_coding protein_coding MGP_LPJ_T0058034.1 MGP_LPJ_G0026564.1 mouse_genomes_project 2 155171353 155197471 - MGP_LPJ_P0058034 Apmap protein_coding protein_coding MGP_LPJ_T0058035.1 MGP_LPJ_G0026564.1 mouse_genomes_project 2 155175394 155189158 - Apmap protein_coding processed_transcript MGP_LPJ_T0058036.1 MGP_LPJ_G0026564.1 mouse_genomes_project 2 155182359 155197448 - Apmap protein_coding processed_transcript MGP_LPJ_T0057692.1 MGP_LPJ_G0026476.1 mouse_genomes_project 2 135817470 135912903 - MGP_LPJ_P0057692 Slc23a2 protein_coding protein_coding MGP_LPJ_T0057693.1 MGP_LPJ_G0026476.1 mouse_genomes_project 2 135820388 135821660 - Slc23a2 protein_coding processed_transcript MGP_LPJ_T0057694.1 MGP_LPJ_G0026476.1 mouse_genomes_project 2 135825682 135832001 - Slc23a2 protein_coding processed_transcript MGP_LPJ_T0057695.1 MGP_LPJ_G0026476.1 mouse_genomes_project 2 135839941 135912903 - Slc23a2 protein_coding processed_transcript MGP_LPJ_T0057696.1 MGP_LPJ_G0026476.1 mouse_genomes_project 2 135840713 135843075 - Slc23a2 protein_coding processed_transcript MGP_LPJ_T0057697.1 MGP_LPJ_G0026476.1 mouse_genomes_project 2 135854174 135859905 - Slc23a2 protein_coding processed_transcript MGP_LPJ_T0057698.1 MGP_LPJ_G0026476.1 mouse_genomes_project 2 135859499 135879595 - MGP_LPJ_P0057698 Slc23a2 protein_coding protein_coding MGP_LPJ_T0053595.1 MGP_LPJ_G0025484.1 mouse_genomes_project 2 28212409 28214484 - Zdhhc12 protein_coding processed_transcript MGP_LPJ_T0053596.1 MGP_LPJ_G0025484.1 mouse_genomes_project 2 28212409 28215113 - MGP_LPJ_P0053596 Zdhhc12 protein_coding protein_coding MGP_LPJ_T0053597.1 MGP_LPJ_G0025484.1 mouse_genomes_project 2 28212416 28215100 - MGP_LPJ_P0053597 Zdhhc12 protein_coding protein_coding MGP_LPJ_T0053598.1 MGP_LPJ_G0025484.1 mouse_genomes_project 2 28212796 28215081 - Zdhhc12 protein_coding retained_intron MGP_LPJ_T0017685.1 MGP_LPJ_G0015314.1 mouse_genomes_project 2 16297815 16318341 - Gm20539 processed_transcript processed_transcript MGP_LPJ_T0003933.1 MGP_LPJ_G0003517.1 mouse_genomes_project 2 23557079 23562524 - A230005M16Rik antisense antisense MGP_LPJ_T0003934.1 MGP_LPJ_G0003517.1 mouse_genomes_project 2 23557736 23559495 - A230005M16Rik antisense antisense MGP_LPJ_T0017794.1 MGP_LPJ_G0015377.1 mouse_genomes_project 2 123979009 123996005 + AV039307 processed_transcript processed_transcript MGP_LPJ_T0017795.1 MGP_LPJ_G0015377.1 mouse_genomes_project 2 123979021 123996139 + AV039307 processed_transcript processed_transcript MGP_LPJ_T0017796.1 MGP_LPJ_G0015377.1 mouse_genomes_project 2 123995682 123996006 + AV039307 processed_transcript processed_transcript MGP_LPJ_T0053339.1 MGP_LPJ_G0025441.1 mouse_genomes_project 2 25028308 25059995 - MGP_LPJ_P0053339 Fam163b protein_coding protein_coding MGP_LPJ_T0058013.1 MGP_LPJ_G0026556.1 mouse_genomes_project 2 153336679 153340915 - MGP_LPJ_P0058013 9230104L09Rik protein_coding protein_coding MGP_LPJ_T0058014.1 MGP_LPJ_G0026556.1 mouse_genomes_project 2 153336872 153354884 - 9230104L09Rik protein_coding processed_transcript MGP_LPJ_T0058402.1 MGP_LPJ_G0026669.1 mouse_genomes_project 2 160230832 160253666 - Pigu protein_coding processed_transcript MGP_LPJ_T0058403.1 MGP_LPJ_G0026669.1 mouse_genomes_project 2 160230832 160312020 - MGP_LPJ_P0058403 Pigu protein_coding protein_coding MGP_LPJ_T0058404.1 MGP_LPJ_G0026669.1 mouse_genomes_project 2 160230833 160312014 - MGP_LPJ_P0058404 Pigu protein_coding protein_coding MGP_LPJ_T0058405.1 MGP_LPJ_G0026669.1 mouse_genomes_project 2 160253629 160257003 - Pigu protein_coding processed_transcript MGP_LPJ_T0058406.1 MGP_LPJ_G0026669.1 mouse_genomes_project 2 160287028 160312009 - Pigu protein_coding retained_intron MGP_LPJ_T0013557.1 MGP_LPJ_G0011648.1 mouse_genomes_project 2 72428507 72428803 + processed_pseudogene processed_pseudogene MGP_LPJ_T0058841.1 MGP_LPJ_G0026745.1 mouse_genomes_project 2 166256314 166431373 - MGP_LPJ_P0058841 Chd6 protein_coding protein_coding MGP_LPJ_T0058842.1 MGP_LPJ_G0026745.1 mouse_genomes_project 2 166269159 166270738 - Chd6 protein_coding processed_transcript MGP_LPJ_T0058843.1 MGP_LPJ_G0026745.1 mouse_genomes_project 2 166269280 166274013 - Chd6 protein_coding processed_transcript MGP_LPJ_T0058844.1 MGP_LPJ_G0026745.1 mouse_genomes_project 2 166289672 166294237 - Chd6 protein_coding retained_intron MGP_LPJ_T0058845.1 MGP_LPJ_G0026745.1 mouse_genomes_project 2 166292374 166431373 - MGP_LPJ_P0058845 Chd6 protein_coding protein_coding MGP_LPJ_T0058846.1 MGP_LPJ_G0026745.1 mouse_genomes_project 2 166301635 166319858 - Chd6 protein_coding retained_intron MGP_LPJ_T0058847.1 MGP_LPJ_G0026745.1 mouse_genomes_project 2 166319398 166431426 - Chd6 protein_coding retained_intron MGP_LPJ_T0058848.1 MGP_LPJ_G0026745.1 mouse_genomes_project 2 166325456 166329614 - Chd6 protein_coding processed_transcript MGP_LPJ_T0058849.1 MGP_LPJ_G0026745.1 mouse_genomes_project 2 166339052 166342703 - Chd6 protein_coding processed_transcript MGP_LPJ_T0058850.1 MGP_LPJ_G0026745.1 mouse_genomes_project 2 166342993 166370560 - MGP_LPJ_P0058850 Chd6 protein_coding protein_coding MGP_LPJ_T0058851.1 MGP_LPJ_G0026745.1 mouse_genomes_project 2 166349870 166431355 - Chd6 protein_coding retained_intron MGP_LPJ_T0054004.1 MGP_LPJ_G0025544.1 mouse_genomes_project 2 30938806 30951518 + MGP_LPJ_P0054004 St6galnac4 protein_coding protein_coding MGP_LPJ_T0054005.1 MGP_LPJ_G0025544.1 mouse_genomes_project 2 30938850 30946095 + St6galnac4 protein_coding retained_intron MGP_LPJ_T0054006.1 MGP_LPJ_G0025544.1 mouse_genomes_project 2 30939292 30949521 + St6galnac4 protein_coding retained_intron MGP_LPJ_T0054007.1 MGP_LPJ_G0025544.1 mouse_genomes_project 2 30939336 30950895 + MGP_LPJ_P0054007 St6galnac4 protein_coding protein_coding MGP_LPJ_T0054008.1 MGP_LPJ_G0025544.1 mouse_genomes_project 2 30946095 30949009 + MGP_LPJ_P0054008 St6galnac4 protein_coding nonsense_mediated_decay MGP_LPJ_T0057868.1 MGP_LPJ_G0026517.1 mouse_genomes_project 2 148263273 148307952 + MGP_LPJ_P0057868 Banf2 protein_coding protein_coding MGP_LPJ_T0057869.1 MGP_LPJ_G0026517.1 mouse_genomes_project 2 148263316 148307952 + MGP_LPJ_P0057869 Banf2 protein_coding protein_coding MGP_LPJ_T0058794.1 MGP_LPJ_G0026735.1 mouse_genomes_project 2 163963518 163982064 + MGP_LPJ_P0058794 Fam83d protein_coding protein_coding MGP_LPJ_T0058795.1 MGP_LPJ_G0026735.1 mouse_genomes_project 2 163976834 163982064 + Fam83d protein_coding retained_intron MGP_LPJ_T0098531.1 MGP_LPJ_G0036806.1 mouse_genomes_project 2 165882094 165883945 + Gm14222 sense_intronic sense_intronic MGP_LPJ_T0057417.1 MGP_LPJ_G0026412.1 mouse_genomes_project 2 132185303 132264179 - MGP_LPJ_P0057417 Anapc1 protein_coding protein_coding MGP_LPJ_T0057418.1 MGP_LPJ_G0026412.1 mouse_genomes_project 2 132190602 132193296 - Anapc1 protein_coding processed_transcript MGP_LPJ_T0057419.1 MGP_LPJ_G0026412.1 mouse_genomes_project 2 132192726 132198039 - Anapc1 protein_coding processed_transcript MGP_LPJ_T0057420.1 MGP_LPJ_G0026412.1 mouse_genomes_project 2 132197568 132202655 - Anapc1 protein_coding processed_transcript MGP_LPJ_T0057421.1 MGP_LPJ_G0026412.1 mouse_genomes_project 2 132198933 132203833 - Anapc1 protein_coding processed_transcript MGP_LPJ_T0057422.1 MGP_LPJ_G0026412.1 mouse_genomes_project 2 132203736 132205229 - Anapc1 protein_coding processed_transcript MGP_LPJ_T0057423.1 MGP_LPJ_G0026412.1 mouse_genomes_project 2 132217197 132264164 - MGP_LPJ_P0057423 Anapc1 protein_coding protein_coding MGP_LPJ_T0057424.1 MGP_LPJ_G0026412.1 mouse_genomes_project 2 132234776 132240233 - Anapc1 protein_coding processed_transcript MGP_LPJ_T0057425.1 MGP_LPJ_G0026412.1 mouse_genomes_project 2 132236655 132241076 - Anapc1 protein_coding processed_transcript MGP_LPJ_T0057426.1 MGP_LPJ_G0026412.1 mouse_genomes_project 2 132253921 132264163 - Anapc1 protein_coding processed_transcript MGP_LPJ_T0057427.1 MGP_LPJ_G0026412.1 mouse_genomes_project 2 132261836 132264142 - MGP_LPJ_P0057427 Anapc1 protein_coding protein_coding MGP_LPJ_T0013565.1 MGP_LPJ_G0011656.1 mouse_genomes_project 2 73977272 73977536 + processed_pseudogene processed_pseudogene MGP_LPJ_T0055606.1 MGP_LPJ_G0025890.1 mouse_genomes_project 2 86841378 86843805 - MGP_LPJ_P0055606 Olfr1037 protein_coding protein_coding MGP_LPJ_T0004166.1 MGP_LPJ_G0003687.1 mouse_genomes_project 2 168952648 168953697 + 2310001K24Rik antisense antisense MGP_LPJ_T0004167.1 MGP_LPJ_G0003687.1 mouse_genomes_project 2 168953236 168953695 + 2310001K24Rik antisense antisense MGP_LPJ_T0057783.1 MGP_LPJ_G0026494.1 mouse_genomes_project 2 140013901 140333557 - MGP_LPJ_P0057783 Pak7 protein_coding protein_coding MGP_LPJ_T0057784.1 MGP_LPJ_G0026494.1 mouse_genomes_project 2 140014694 140333579 - MGP_LPJ_P0057784 Pak7 protein_coding protein_coding MGP_LPJ_T0057785.1 MGP_LPJ_G0026494.1 mouse_genomes_project 2 140209006 140333586 - Pak7 protein_coding retained_intron MGP_LPJ_T0059011.1 MGP_LPJ_G0026800.1 mouse_genomes_project 2 170215388 170226529 - MGP_LPJ_P0059011 Wfdc11 protein_coding protein_coding MGP_LPJ_T0059012.1 MGP_LPJ_G0026800.1 mouse_genomes_project 2 170215531 170218063 - MGP_LPJ_P0059012 Wfdc11 protein_coding protein_coding MGP_LPJ_T0013841.1 MGP_LPJ_G0011932.1 mouse_genomes_project 2 187897091 187897879 + processed_pseudogene processed_pseudogene MGP_LPJ_T0053136.1 MGP_LPJ_G0025407.1 mouse_genomes_project 2 23872442 23882660 - Ubac1 protein_coding processed_transcript MGP_LPJ_T0053137.1 MGP_LPJ_G0025407.1 mouse_genomes_project 2 23872442 23896485 - MGP_LPJ_P0053137 Ubac1 protein_coding protein_coding MGP_LPJ_T0053138.1 MGP_LPJ_G0025407.1 mouse_genomes_project 2 23872705 23883961 - Ubac1 protein_coding processed_transcript MGP_LPJ_T0053139.1 MGP_LPJ_G0025407.1 mouse_genomes_project 2 23880143 23891050 - MGP_LPJ_P0053139 Ubac1 protein_coding protein_coding MGP_LPJ_T0053140.1 MGP_LPJ_G0025407.1 mouse_genomes_project 2 23881266 23896270 - MGP_LPJ_P0053140 Ubac1 protein_coding protein_coding MGP_LPJ_T0053141.1 MGP_LPJ_G0025407.1 mouse_genomes_project 2 23883632 23885691 - Ubac1 protein_coding processed_transcript MGP_LPJ_T0053142.1 MGP_LPJ_G0025407.1 mouse_genomes_project 2 23885272 23892216 - Ubac1 protein_coding processed_transcript MGP_LPJ_T0053143.1 MGP_LPJ_G0025407.1 mouse_genomes_project 2 23889649 23896304 - Ubac1 protein_coding processed_transcript MGP_LPJ_T0053144.1 MGP_LPJ_G0025407.1 mouse_genomes_project 2 23890702 23896340 - Ubac1 protein_coding processed_transcript MGP_LPJ_T0054190.1 MGP_LPJ_G0025572.1 mouse_genomes_project 2 33302187 33324023 - MGP_LPJ_P0054190 Rabepk protein_coding protein_coding MGP_LPJ_T0054191.1 MGP_LPJ_G0025572.1 mouse_genomes_project 2 33302207 33324173 - MGP_LPJ_P0054191 Rabepk protein_coding protein_coding MGP_LPJ_T0054192.1 MGP_LPJ_G0025572.1 mouse_genomes_project 2 33302398 33319668 - MGP_LPJ_P0054192 Rabepk protein_coding nonsense_mediated_decay MGP_LPJ_T0054193.1 MGP_LPJ_G0025572.1 mouse_genomes_project 2 33308930 33324269 - MGP_LPJ_P0054193 Rabepk protein_coding nonsense_mediated_decay MGP_LPJ_T0054194.1 MGP_LPJ_G0025572.1 mouse_genomes_project 2 33309322 33324306 - MGP_LPJ_P0054194 Rabepk protein_coding nonsense_mediated_decay MGP_LPJ_T0054195.1 MGP_LPJ_G0025572.1 mouse_genomes_project 2 33309794 33324159 - Rabepk protein_coding retained_intron MGP_LPJ_T0013659.1 MGP_LPJ_G0011750.1 mouse_genomes_project 2 105975825 105976215 + processed_pseudogene processed_pseudogene MGP_LPJ_T0055034.1 MGP_LPJ_G0025742.1 mouse_genomes_project 2 69907875 70312816 + MGP_LPJ_P0055034 Myo3b protein_coding protein_coding MGP_LPJ_T0055035.1 MGP_LPJ_G0025742.1 mouse_genomes_project 2 69953702 70312819 + MGP_LPJ_P0055035 Myo3b protein_coding protein_coding MGP_LPJ_T0055036.1 MGP_LPJ_G0025742.1 mouse_genomes_project 2 69965726 70309436 + MGP_LPJ_P0055036 Myo3b protein_coding unknown_likely_coding MGP_LPJ_T0055037.1 MGP_LPJ_G0025742.1 mouse_genomes_project 2 69966833 70059589 + MGP_LPJ_P0055037 Myo3b protein_coding protein_coding MGP_LPJ_T0001115.1 MGP_LPJ_G0001040.1 mouse_genomes_project 2 68803417 68804283 + TEC TEC MGP_LPJ_T0007233.1 MGP_LPJ_G0005935.1 mouse_genomes_project 2 71792267 71794350 - Gm17250 lincRNA lincRNA MGP_LPJ_T0055548.1 MGP_LPJ_G0025851.1 mouse_genomes_project 2 85547361 85551481 + Tnks1bp1 protein_coding processed_transcript MGP_LPJ_T0055549.1 MGP_LPJ_G0025851.1 mouse_genomes_project 2 85547394 85572389 + Tnks1bp1 protein_coding processed_transcript MGP_LPJ_T0055550.1 MGP_LPJ_G0025851.1 mouse_genomes_project 2 85547438 85563427 + MGP_LPJ_P0055550 Tnks1bp1 protein_coding unknown_likely_coding MGP_LPJ_T0055551.1 MGP_LPJ_G0025851.1 mouse_genomes_project 2 85549808 85551399 + Tnks1bp1 protein_coding processed_transcript MGP_LPJ_T0055552.1 MGP_LPJ_G0025851.1 mouse_genomes_project 2 85549808 85572393 + MGP_LPJ_P0055552 Tnks1bp1 protein_coding protein_coding MGP_LPJ_T0055553.1 MGP_LPJ_G0025851.1 mouse_genomes_project 2 85549956 85572383 + Tnks1bp1 protein_coding processed_transcript MGP_LPJ_T0055554.1 MGP_LPJ_G0025851.1 mouse_genomes_project 2 85550241 85557906 + Tnks1bp1 protein_coding processed_transcript MGP_LPJ_T0055555.1 MGP_LPJ_G0025851.1 mouse_genomes_project 2 85557507 85572393 + MGP_LPJ_P0055555 Tnks1bp1 protein_coding protein_coding MGP_LPJ_T0058447.1 MGP_LPJ_G0026676.1 mouse_genomes_project 2 160614390 160673529 - MGP_LPJ_P0058447 Trpc4ap protein_coding protein_coding MGP_LPJ_T0058448.1 MGP_LPJ_G0026676.1 mouse_genomes_project 2 160614427 160673477 - MGP_LPJ_P0058448 Trpc4ap protein_coding protein_coding MGP_LPJ_T0058449.1 MGP_LPJ_G0026676.1 mouse_genomes_project 2 160614864 160617862 - Trpc4ap protein_coding processed_transcript MGP_LPJ_T0058450.1 MGP_LPJ_G0026676.1 mouse_genomes_project 2 160615715 160617908 - Trpc4ap protein_coding retained_intron MGP_LPJ_T0058451.1 MGP_LPJ_G0026676.1 mouse_genomes_project 2 160619101 160652977 - Trpc4ap protein_coding retained_intron MGP_LPJ_T0058452.1 MGP_LPJ_G0026676.1 mouse_genomes_project 2 160619108 160620660 - Trpc4ap protein_coding retained_intron MGP_LPJ_T0058453.1 MGP_LPJ_G0026676.1 mouse_genomes_project 2 160623734 160643705 - Trpc4ap protein_coding retained_intron MGP_LPJ_T0058454.1 MGP_LPJ_G0026676.1 mouse_genomes_project 2 160633398 160673527 - Trpc4ap protein_coding retained_intron MGP_LPJ_T0058455.1 MGP_LPJ_G0026676.1 mouse_genomes_project 2 160645792 160648453 - Trpc4ap protein_coding retained_intron MGP_LPJ_T0058456.1 MGP_LPJ_G0026676.1 mouse_genomes_project 2 160652982 160673268 - Trpc4ap protein_coding processed_transcript MGP_LPJ_T0057170.1 MGP_LPJ_G0026353.1 mouse_genomes_project 2 125661574 125796937 + MGP_LPJ_P0057170 Gm14085 protein_coding protein_coding MGP_LPJ_T0099360.1 MGP_LPJ_G0037623.1 mouse_genomes_project 2 143621954 143622058 + Gm27385 snRNA snRNA MGP_LPJ_T0013641.1 MGP_LPJ_G0011732.1 mouse_genomes_project 2 98854515 98855916 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013612.1 MGP_LPJ_G0011703.1 mouse_genomes_project 2 88342113 88342639 + processed_pseudogene processed_pseudogene MGP_LPJ_T0054536.1 MGP_LPJ_G0025650.1 mouse_genomes_project 2 47875745 47964030 + MGP_LPJ_P0054536 Acvr2a protein_coding protein_coding MGP_LPJ_T0054537.1 MGP_LPJ_G0025650.1 mouse_genomes_project 2 47951153 47961009 + Acvr2a protein_coding processed_transcript MGP_LPJ_T0101311.1 MGP_LPJ_G0039531.1 mouse_genomes_project 2 135613790 135614030 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0054718.1 MGP_LPJ_G0025686.1 mouse_genomes_project 2 58875168 58898026 + MGP_LPJ_P0054718 Dapl1 protein_coding protein_coding MGP_LPJ_T0054719.1 MGP_LPJ_G0025686.1 mouse_genomes_project 2 58875184 58898026 + Dapl1 protein_coding processed_transcript MGP_LPJ_T0004154.1 MGP_LPJ_G0003675.1 mouse_genomes_project 2 160572124 160573035 - Gm14257 antisense antisense MGP_LPJ_T0007138.1 MGP_LPJ_G0005860.1 mouse_genomes_project 2 3228427 3235834 + Gm10857 lincRNA lincRNA MGP_LPJ_T0007139.1 MGP_LPJ_G0005860.1 mouse_genomes_project 2 3228441 3235779 + Gm10857 lincRNA lincRNA MGP_LPJ_T0056518.1 MGP_LPJ_G0026205.1 mouse_genomes_project 2 114277199 114278138 - MGP_LPJ_P0056518 Olfr1297 protein_coding protein_coding MGP_LPJ_T0058960.1 MGP_LPJ_G0026780.1 mouse_genomes_project 2 169775671 169778077 - MGP_LPJ_P0058960 Svs4 protein_coding protein_coding MGP_LPJ_T0056242.1 MGP_LPJ_G0026134.1 mouse_genomes_project 2 104365961 104472150 - MGP_LPJ_P0056242 Trim44 protein_coding protein_coding MGP_LPJ_T0056243.1 MGP_LPJ_G0026134.1 mouse_genomes_project 2 104370324 104471507 - MGP_LPJ_P0056243 Trim44 protein_coding protein_coding MGP_LPJ_T0056244.1 MGP_LPJ_G0026134.1 mouse_genomes_project 2 104425847 104479048 - MGP_LPJ_P0056244 Trim44 protein_coding protein_coding MGP_LPJ_T0057805.1 MGP_LPJ_G0026499.1 mouse_genomes_project 2 141035004 141071471 - MGP_LPJ_P0057805 Jag1 protein_coding protein_coding MGP_LPJ_T0057806.1 MGP_LPJ_G0026499.1 mouse_genomes_project 2 141036419 141039477 - Jag1 protein_coding retained_intron MGP_LPJ_T0013525.1 MGP_LPJ_G0011616.1 mouse_genomes_project 2 58778349 58778779 + processed_pseudogene processed_pseudogene MGP_LPJ_T0053746.1 MGP_LPJ_G0025505.1 mouse_genomes_project 2 29012640 29017832 - Asb6 protein_coding retained_intron MGP_LPJ_T0053747.1 MGP_LPJ_G0025505.1 mouse_genomes_project 2 29012640 29019911 - MGP_LPJ_P0053747 Asb6 protein_coding protein_coding MGP_LPJ_T0053748.1 MGP_LPJ_G0025505.1 mouse_genomes_project 2 29014013 29017843 - MGP_LPJ_P0053748 Asb6 protein_coding nonsense_mediated_decay MGP_LPJ_T0053749.1 MGP_LPJ_G0025505.1 mouse_genomes_project 2 29014733 29017869 - Asb6 protein_coding retained_intron MGP_LPJ_T0053750.1 MGP_LPJ_G0025505.1 mouse_genomes_project 2 29015037 29017072 - Asb6 protein_coding retained_intron MGP_LPJ_T0099340.1 MGP_LPJ_G0037603.1 mouse_genomes_project 2 85188948 85189049 + Gm27942 snRNA snRNA MGP_LPJ_T0052457.1 MGP_LPJ_G0025281.1 mouse_genomes_project 2 9694991 9771587 - Fam188a protein_coding processed_transcript MGP_LPJ_T0052458.1 MGP_LPJ_G0025281.1 mouse_genomes_project 2 9694991 9771574 - MGP_LPJ_P0052458 Fam188a protein_coding nonsense_mediated_decay MGP_LPJ_T0052459.1 MGP_LPJ_G0025281.1 mouse_genomes_project 2 9694991 9771587 - MGP_LPJ_P0052459 Fam188a protein_coding nonsense_mediated_decay MGP_LPJ_T0052460.1 MGP_LPJ_G0025281.1 mouse_genomes_project 2 9694991 9771609 - MGP_LPJ_P0052460 Fam188a protein_coding protein_coding MGP_LPJ_T0052461.1 MGP_LPJ_G0025281.1 mouse_genomes_project 2 9694991 9771583 - MGP_LPJ_P0052461 Fam188a protein_coding nonsense_mediated_decay MGP_LPJ_T0052462.1 MGP_LPJ_G0025281.1 mouse_genomes_project 2 9694994 9771591 - MGP_LPJ_P0052462 Fam188a protein_coding nonsense_mediated_decay MGP_LPJ_T0052463.1 MGP_LPJ_G0025281.1 mouse_genomes_project 2 9695360 9704640 - MGP_LPJ_P0052463 Fam188a protein_coding nonsense_mediated_decay MGP_LPJ_T0052464.1 MGP_LPJ_G0025281.1 mouse_genomes_project 2 9695646 9748808 - Fam188a protein_coding retained_intron MGP_LPJ_T0052465.1 MGP_LPJ_G0025281.1 mouse_genomes_project 2 9695694 9771427 - Fam188a protein_coding processed_transcript MGP_LPJ_T0052466.1 MGP_LPJ_G0025281.1 mouse_genomes_project 2 9698658 9771549 - MGP_LPJ_P0052466 Fam188a protein_coding protein_coding MGP_LPJ_T0052467.1 MGP_LPJ_G0025281.1 mouse_genomes_project 2 9704513 9771570 - Fam188a protein_coding retained_intron MGP_LPJ_T0052468.1 MGP_LPJ_G0025281.1 mouse_genomes_project 2 9712061 9713906 - Fam188a protein_coding retained_intron MGP_LPJ_T0052469.1 MGP_LPJ_G0025281.1 mouse_genomes_project 2 9712230 9771588 - MGP_LPJ_P0052469 Fam188a protein_coding protein_coding MGP_LPJ_T0052470.1 MGP_LPJ_G0025281.1 mouse_genomes_project 2 9737043 9737879 - Fam188a protein_coding retained_intron MGP_LPJ_T0052471.1 MGP_LPJ_G0025281.1 mouse_genomes_project 2 9737744 9762371 - MGP_LPJ_P0052471 Fam188a protein_coding protein_coding MGP_LPJ_T0052472.1 MGP_LPJ_G0025281.1 mouse_genomes_project 2 9750612 9771580 - Fam188a protein_coding retained_intron MGP_LPJ_T0052473.1 MGP_LPJ_G0025281.1 mouse_genomes_project 2 9750997 9762510 - Fam188a protein_coding retained_intron MGP_LPJ_T0052474.1 MGP_LPJ_G0025281.1 mouse_genomes_project 2 9752012 9771530 - MGP_LPJ_P0052474 Fam188a protein_coding protein_coding MGP_LPJ_T0052475.1 MGP_LPJ_G0025281.1 mouse_genomes_project 2 9752023 9771388 - MGP_LPJ_P0052475 Fam188a protein_coding nonsense_mediated_decay MGP_LPJ_T0052476.1 MGP_LPJ_G0025281.1 mouse_genomes_project 2 9754951 9755683 - Fam188a protein_coding processed_transcript MGP_LPJ_T0053722.1 MGP_LPJ_G0025502.1 mouse_genomes_project 2 28758008 28775064 + MGP_LPJ_P0053722 Cstad protein_coding protein_coding MGP_LPJ_T0053723.1 MGP_LPJ_G0025502.1 mouse_genomes_project 2 28769743 28774338 + Cstad protein_coding processed_transcript MGP_LPJ_T0058207.1 MGP_LPJ_G0026617.1 mouse_genomes_project 2 157680567 157681878 - MGP_LPJ_P0058207 Foxs1 protein_coding protein_coding MGP_LPJ_T0007330.1 MGP_LPJ_G0006011.1 mouse_genomes_project 2 123664752 123671345 + Gm26899 lincRNA lincRNA MGP_LPJ_T0004210.1 MGP_LPJ_G0003717.1 mouse_genomes_project 2 188206233 188218186 + antisense antisense MGP_LPJ_T0004211.1 MGP_LPJ_G0003717.1 mouse_genomes_project 2 188206238 188209911 + antisense antisense MGP_LPJ_T0004212.1 MGP_LPJ_G0003717.1 mouse_genomes_project 2 188206271 188209978 + antisense antisense MGP_LPJ_T0004213.1 MGP_LPJ_G0003717.1 mouse_genomes_project 2 188207242 188210257 + antisense antisense MGP_LPJ_T0004214.1 MGP_LPJ_G0003717.1 mouse_genomes_project 2 188207285 188211431 + antisense antisense MGP_LPJ_T0004215.1 MGP_LPJ_G0003717.1 mouse_genomes_project 2 188207351 188210490 + antisense antisense MGP_LPJ_T0004216.1 MGP_LPJ_G0003717.1 mouse_genomes_project 2 188211521 188218237 + antisense antisense MGP_LPJ_T0056453.1 MGP_LPJ_G0026177.1 mouse_genomes_project 2 111570783 111780325 - MGP_LPJ_P0056453 Mettl15 protein_coding protein_coding MGP_LPJ_T0056454.1 MGP_LPJ_G0026177.1 mouse_genomes_project 2 111570786 111780315 - Mettl15 protein_coding processed_transcript MGP_LPJ_T0056455.1 MGP_LPJ_G0026177.1 mouse_genomes_project 2 111622049 111782804 - MGP_LPJ_P0056455 Mettl15 protein_coding protein_coding MGP_LPJ_T0056456.1 MGP_LPJ_G0026177.1 mouse_genomes_project 2 111737827 111782782 - Mettl15 protein_coding retained_intron MGP_LPJ_T0056457.1 MGP_LPJ_G0026177.1 mouse_genomes_project 2 111737892 111782758 - Mettl15 protein_coding processed_transcript MGP_LPJ_T0016669.1 MGP_LPJ_G0014760.1 mouse_genomes_project X 127433372 127434374 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016646.1 MGP_LPJ_G0014737.1 mouse_genomes_project X 117912589 117913066 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005636.1 MGP_LPJ_G0004748.1 mouse_genomes_project X 154619047 154619620 + Gm15156 antisense antisense MGP_LPJ_T0016362.1 MGP_LPJ_G0014453.1 mouse_genomes_project X 66782879 66783361 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011191.1 MGP_LPJ_G0009309.1 mouse_genomes_project X 64389788 64389854 - Mir201 miRNA miRNA MGP_LPJ_T0095662.1 MGP_LPJ_G0035558.1 mouse_genomes_project X 34135614 34335135 + MGP_LPJ_P0095662 6030498E09Rik protein_coding protein_coding MGP_LPJ_T0095663.1 MGP_LPJ_G0035558.1 mouse_genomes_project X 34330532 34332004 + MGP_LPJ_P0095663 6030498E09Rik protein_coding protein_coding MGP_LPJ_T0016254.1 MGP_LPJ_G0014345.1 mouse_genomes_project X 38871685 38871857 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016817.1 MGP_LPJ_G0014908.1 mouse_genomes_project X 156046264 156048121 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095515.1 MGP_LPJ_G0035494.1 mouse_genomes_project X 16201683 16235352 - MGP_LPJ_P0095515 Zfp182 protein_coding protein_coding MGP_LPJ_T0095516.1 MGP_LPJ_G0035494.1 mouse_genomes_project X 16201687 16235401 - MGP_LPJ_P0095516 Zfp182 protein_coding protein_coding MGP_LPJ_T0095517.1 MGP_LPJ_G0035494.1 mouse_genomes_project X 16202333 16235335 - MGP_LPJ_P0095517 Zfp182 protein_coding protein_coding MGP_LPJ_T0095518.1 MGP_LPJ_G0035494.1 mouse_genomes_project X 16204333 16235665 - Zfp182 protein_coding processed_transcript MGP_LPJ_T0095519.1 MGP_LPJ_G0035494.1 mouse_genomes_project X 16231036 16235392 - Zfp182 protein_coding processed_transcript MGP_LPJ_T0099906.1 MGP_LPJ_G0038169.1 mouse_genomes_project X 78975138 78975238 + Gm22686 snRNA snRNA MGP_LPJ_T0016189.1 MGP_LPJ_G0014280.1 mouse_genomes_project X 11753740 11754983 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095982.1 MGP_LPJ_G0035662.1 mouse_genomes_project X 65304542 65305221 - MGP_LPJ_P0095982 protein_coding protein_coding MGP_LPJ_T0096449.1 MGP_LPJ_G0035761.1 mouse_genomes_project X 73063688 73075476 + MGP_LPJ_P0096449 protein_coding protein_coding MGP_LPJ_T0095166.1 MGP_LPJ_G0035400.1 mouse_genomes_project X 2221318 2249517 + MGP_LPJ_P0095166 Cacna1f protein_coding nonsense_mediated_decay MGP_LPJ_T0095167.1 MGP_LPJ_G0035400.1 mouse_genomes_project X 2221333 2232429 + Cacna1f protein_coding retained_intron MGP_LPJ_T0095168.1 MGP_LPJ_G0035400.1 mouse_genomes_project X 2221334 2249520 + MGP_LPJ_P0095168 Cacna1f protein_coding protein_coding MGP_LPJ_T0095169.1 MGP_LPJ_G0035400.1 mouse_genomes_project X 2221355 2233453 + MGP_LPJ_P0095169 Cacna1f protein_coding protein_coding MGP_LPJ_T0095170.1 MGP_LPJ_G0035400.1 mouse_genomes_project X 2221364 2249520 + MGP_LPJ_P0095170 Cacna1f protein_coding protein_coding MGP_LPJ_T0095171.1 MGP_LPJ_G0035400.1 mouse_genomes_project X 2221379 2249518 + Cacna1f protein_coding retained_intron MGP_LPJ_T0095172.1 MGP_LPJ_G0035400.1 mouse_genomes_project X 2240553 2242265 + Cacna1f protein_coding retained_intron MGP_LPJ_T0095173.1 MGP_LPJ_G0035400.1 mouse_genomes_project X 2241517 2244570 + MGP_LPJ_P0095173 Cacna1f protein_coding protein_coding MGP_LPJ_T0095174.1 MGP_LPJ_G0035400.1 mouse_genomes_project X 2241517 2244823 + MGP_LPJ_P0095174 Cacna1f protein_coding protein_coding MGP_LPJ_T0095175.1 MGP_LPJ_G0035400.1 mouse_genomes_project X 2242512 2244086 + Cacna1f protein_coding retained_intron MGP_LPJ_T0095176.1 MGP_LPJ_G0035400.1 mouse_genomes_project X 2245599 2247313 + Cacna1f protein_coding retained_intron MGP_LPJ_T0099915.1 MGP_LPJ_G0038178.1 mouse_genomes_project X 102726914 102727025 - Gm22090 snRNA snRNA MGP_LPJ_T0096970.1 MGP_LPJ_G0035922.1 mouse_genomes_project X 107696337 107702206 + MGP_LPJ_P0096970 protein_coding protein_coding MGP_LPJ_T0096586.1 MGP_LPJ_G0035814.1 mouse_genomes_project X 92382587 92544162 - MGP_LPJ_P0096586 Arhgef9 protein_coding protein_coding MGP_LPJ_T0096587.1 MGP_LPJ_G0035814.1 mouse_genomes_project X 92382590 92514328 - MGP_LPJ_P0096587 Arhgef9 protein_coding protein_coding MGP_LPJ_T0096588.1 MGP_LPJ_G0035814.1 mouse_genomes_project X 92382596 92514430 - MGP_LPJ_P0096588 Arhgef9 protein_coding protein_coding MGP_LPJ_T0096589.1 MGP_LPJ_G0035814.1 mouse_genomes_project X 92383829 92544165 - MGP_LPJ_P0096589 Arhgef9 protein_coding protein_coding MGP_LPJ_T0096590.1 MGP_LPJ_G0035814.1 mouse_genomes_project X 92383918 92544493 - MGP_LPJ_P0096590 Arhgef9 protein_coding protein_coding MGP_LPJ_T0096591.1 MGP_LPJ_G0035814.1 mouse_genomes_project X 92385176 92544481 - MGP_LPJ_P0096591 Arhgef9 protein_coding protein_coding MGP_LPJ_T0096592.1 MGP_LPJ_G0035814.1 mouse_genomes_project X 92385207 92544516 - MGP_LPJ_P0096592 Arhgef9 protein_coding protein_coding MGP_LPJ_T0096593.1 MGP_LPJ_G0035814.1 mouse_genomes_project X 92385256 92425052 - MGP_LPJ_P0096593 Arhgef9 protein_coding protein_coding MGP_LPJ_T0096594.1 MGP_LPJ_G0035814.1 mouse_genomes_project X 92385571 92388603 - MGP_LPJ_P0096594 Arhgef9 protein_coding protein_coding MGP_LPJ_T0096595.1 MGP_LPJ_G0035814.1 mouse_genomes_project X 92385572 92392290 - MGP_LPJ_P0096595 Arhgef9 protein_coding protein_coding MGP_LPJ_T0096596.1 MGP_LPJ_G0035814.1 mouse_genomes_project X 92385625 92513541 - MGP_LPJ_P0096596 Arhgef9 protein_coding protein_coding MGP_LPJ_T0096597.1 MGP_LPJ_G0035814.1 mouse_genomes_project X 92406907 92513769 - MGP_LPJ_P0096597 Arhgef9 protein_coding protein_coding MGP_LPJ_T0096598.1 MGP_LPJ_G0035814.1 mouse_genomes_project X 92424972 92544112 - MGP_LPJ_P0096598 Arhgef9 protein_coding protein_coding MGP_LPJ_T0096599.1 MGP_LPJ_G0035814.1 mouse_genomes_project X 92445318 92514483 - MGP_LPJ_P0096599 Arhgef9 protein_coding protein_coding MGP_LPJ_T0096600.1 MGP_LPJ_G0035814.1 mouse_genomes_project X 92457751 92514382 - MGP_LPJ_P0096600 Arhgef9 protein_coding protein_coding MGP_LPJ_T0097183.1 MGP_LPJ_G0035995.1 mouse_genomes_project X 134314434 134317268 + MGP_LPJ_P0097183 protein_coding protein_coding MGP_LPJ_T0018564.1 MGP_LPJ_G0015693.1 mouse_genomes_project X 16117884 16144986 + A230072C01Rik processed_transcript processed_transcript MGP_LPJ_T0018565.1 MGP_LPJ_G0015693.1 mouse_genomes_project X 16118314 16145000 + A230072C01Rik processed_transcript processed_transcript MGP_LPJ_T0009413.1 MGP_LPJ_G0007558.1 mouse_genomes_project X 96846606 96857492 - Gm14809 lincRNA lincRNA MGP_LPJ_T0016836.1 MGP_LPJ_G0014927.1 mouse_genomes_project X 158661166 158661442 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099883.1 MGP_LPJ_G0038146.1 mouse_genomes_project X 17619291 17619394 + Gm25812 snRNA snRNA MGP_LPJ_T0011163.1 MGP_LPJ_G0009281.1 mouse_genomes_project X 48618058 48618149 - Mir450-1 miRNA miRNA MGP_LPJ_T0096945.1 MGP_LPJ_G0035913.1 mouse_genomes_project X 105468952 105494322 + MGP_LPJ_P0096945 Tbx22 protein_coding protein_coding MGP_LPJ_T0096946.1 MGP_LPJ_G0035913.1 mouse_genomes_project X 105468952 105482166 + MGP_LPJ_P0096946 Tbx22 protein_coding nonsense_mediated_decay MGP_LPJ_T0096947.1 MGP_LPJ_G0035913.1 mouse_genomes_project X 105477500 105487665 + MGP_LPJ_P0096947 Tbx22 protein_coding protein_coding MGP_LPJ_T0096948.1 MGP_LPJ_G0035913.1 mouse_genomes_project X 105479955 105494325 + MGP_LPJ_P0096948 Tbx22 protein_coding protein_coding MGP_LPJ_T0096949.1 MGP_LPJ_G0035913.1 mouse_genomes_project X 105480007 105488390 + MGP_LPJ_P0096949 Tbx22 protein_coding protein_coding MGP_LPJ_T0095721.1 MGP_LPJ_G0035569.1 mouse_genomes_project X 39766117 39769002 - MGP_LPJ_P0095721 Dcaf12l2 protein_coding protein_coding MGP_LPJ_T0011785.1 MGP_LPJ_G0009903.1 mouse_genomes_project X 106974938 106975230 - Gm26415 misc_RNA misc_RNA MGP_LPJ_T0016269.1 MGP_LPJ_G0014360.1 mouse_genomes_project X 42843949 42844915 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005623.1 MGP_LPJ_G0004740.1 mouse_genomes_project X 92797084 92909284 + antisense antisense MGP_LPJ_T0102511.1 MGP_LPJ_G0040547.1 mouse_genomes_project X 100257388 100335705 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0096931.1 MGP_LPJ_G0035910.1 mouse_genomes_project X 104928412 104953839 + MGP_LPJ_P0096931 A630033H20Rik protein_coding protein_coding MGP_LPJ_T0096932.1 MGP_LPJ_G0035910.1 mouse_genomes_project X 104928412 104956099 + MGP_LPJ_P0096932 A630033H20Rik protein_coding protein_coding MGP_LPJ_T0096933.1 MGP_LPJ_G0035910.1 mouse_genomes_project X 104928939 104953865 + MGP_LPJ_P0096933 A630033H20Rik protein_coding protein_coding MGP_LPJ_T0096934.1 MGP_LPJ_G0035910.1 mouse_genomes_project X 104928939 104956099 + MGP_LPJ_P0096934 A630033H20Rik protein_coding protein_coding MGP_LPJ_T0096935.1 MGP_LPJ_G0035910.1 mouse_genomes_project X 104929083 104953585 + MGP_LPJ_P0096935 A630033H20Rik protein_coding protein_coding MGP_LPJ_T0096936.1 MGP_LPJ_G0035910.1 mouse_genomes_project X 104929100 104956095 + MGP_LPJ_P0096936 A630033H20Rik protein_coding protein_coding MGP_LPJ_T0102489.1 MGP_LPJ_G0040525.1 mouse_genomes_project X 49485440 52106035 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0097648.1 MGP_LPJ_G0036120.1 mouse_genomes_project X 158473107 158559636 + MGP_LPJ_P0097648 Map7d2 protein_coding protein_coding MGP_LPJ_T0097649.1 MGP_LPJ_G0036120.1 mouse_genomes_project X 158506208 158551241 + MGP_LPJ_P0097649 Map7d2 protein_coding protein_coding MGP_LPJ_T0097650.1 MGP_LPJ_G0036120.1 mouse_genomes_project X 158519300 158547433 + MGP_LPJ_P0097650 Map7d2 protein_coding protein_coding MGP_LPJ_T0097651.1 MGP_LPJ_G0036120.1 mouse_genomes_project X 158519312 158530231 + MGP_LPJ_P0097651 Map7d2 protein_coding protein_coding MGP_LPJ_T0016620.1 MGP_LPJ_G0014711.1 mouse_genomes_project X 112577701 112578160 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095812.1 MGP_LPJ_G0035597.1 mouse_genomes_project X 46325868 46383612 + MGP_LPJ_P0095812 Stk26 protein_coding protein_coding MGP_LPJ_T0095813.1 MGP_LPJ_G0035597.1 mouse_genomes_project X 46326262 46365537 + Stk26 protein_coding retained_intron MGP_LPJ_T0095814.1 MGP_LPJ_G0035597.1 mouse_genomes_project X 46326262 46383612 + MGP_LPJ_P0095814 Stk26 protein_coding protein_coding MGP_LPJ_T0095815.1 MGP_LPJ_G0035597.1 mouse_genomes_project X 46363850 46377311 + Stk26 protein_coding retained_intron MGP_LPJ_T0016401.1 MGP_LPJ_G0014492.1 mouse_genomes_project X 73996633 73997610 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016198.1 MGP_LPJ_G0014289.1 mouse_genomes_project X 15000976 15001192 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095440.1 MGP_LPJ_G0035473.1 mouse_genomes_project X 12747210 12760900 - Fundc1 protein_coding processed_transcript MGP_LPJ_T0095441.1 MGP_LPJ_G0035473.1 mouse_genomes_project X 12747210 12761529 - MGP_LPJ_P0095441 Fundc1 protein_coding protein_coding MGP_LPJ_T0095442.1 MGP_LPJ_G0035473.1 mouse_genomes_project X 12747246 12761575 - MGP_LPJ_P0095442 Fundc1 protein_coding protein_coding MGP_LPJ_T0016577.1 MGP_LPJ_G0014668.1 mouse_genomes_project X 104407117 104407624 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016385.1 MGP_LPJ_G0014476.1 mouse_genomes_project X 71171911 71172660 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011793.1 MGP_LPJ_G0009911.1 mouse_genomes_project X 138129598 138129922 - Gm24380 misc_RNA misc_RNA MGP_LPJ_T0018627.1 MGP_LPJ_G0015711.1 mouse_genomes_project X 134389821 134400894 + 5730412P04Rik processed_transcript processed_transcript MGP_LPJ_T0016673.1 MGP_LPJ_G0014764.1 mouse_genomes_project X 128436757 128437433 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016624.1 MGP_LPJ_G0014715.1 mouse_genomes_project X 113214832 113221604 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099938.1 MGP_LPJ_G0038201.1 mouse_genomes_project X 150079314 150079418 - Gm26441 snRNA snRNA MGP_LPJ_T0016373.1 MGP_LPJ_G0014464.1 mouse_genomes_project X 67439818 67440449 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095311.1 MGP_LPJ_G0035428.1 mouse_genomes_project X 2822342 2843219 - MGP_LPJ_P0095311 Tbc1d25 protein_coding protein_coding MGP_LPJ_T0095312.1 MGP_LPJ_G0035428.1 mouse_genomes_project X 2822342 2843219 - MGP_LPJ_P0095312 Tbc1d25 protein_coding protein_coding MGP_LPJ_T0095313.1 MGP_LPJ_G0035428.1 mouse_genomes_project X 2822353 2842996 - Tbc1d25 protein_coding retained_intron MGP_LPJ_T0095314.1 MGP_LPJ_G0035428.1 mouse_genomes_project X 2822575 2842871 - MGP_LPJ_P0095314 Tbc1d25 protein_coding protein_coding MGP_LPJ_T0095787.1 MGP_LPJ_G0035586.1 mouse_genomes_project X 44211179 44226770 - MGP_LPJ_P0095787 Gpr119 protein_coding protein_coding MGP_LPJ_T0097849.1 MGP_LPJ_G0036170.1 mouse_genomes_project X 167950361 167955261 - Msl3 protein_coding retained_intron MGP_LPJ_T0097850.1 MGP_LPJ_G0036170.1 mouse_genomes_project X 167951108 167969287 - MGP_LPJ_P0097850 Msl3 protein_coding protein_coding MGP_LPJ_T0097851.1 MGP_LPJ_G0036170.1 mouse_genomes_project X 167954932 167967977 - Msl3 protein_coding retained_intron MGP_LPJ_T0016431.1 MGP_LPJ_G0014522.1 mouse_genomes_project X 81733830 81734142 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011801.1 MGP_LPJ_G0009919.1 mouse_genomes_project X 168583998 168584167 + Gm27980 misc_RNA misc_RNA MGP_LPJ_T0095630.1 MGP_LPJ_G0035545.1 mouse_genomes_project X 33332157 33370088 - protein_coding unprocessed_pseudogene MGP_LPJ_T0095632.1 MGP_LPJ_G0035545.1 mouse_genomes_project X 33332892 33370088 - MGP_LPJ_P0095632 protein_coding protein_coding MGP_LPJ_T0097484.1 MGP_LPJ_G0036077.1 mouse_genomes_project X 150019170 150133070 + MGP_LPJ_P0097484 Wnk3 protein_coding protein_coding MGP_LPJ_T0097485.1 MGP_LPJ_G0036077.1 mouse_genomes_project X 150019170 150133070 + MGP_LPJ_P0097485 Wnk3 protein_coding protein_coding MGP_LPJ_T0097486.1 MGP_LPJ_G0036077.1 mouse_genomes_project X 150019232 150133012 + MGP_LPJ_P0097486 Wnk3 protein_coding nonsense_mediated_decay MGP_LPJ_T0097487.1 MGP_LPJ_G0036077.1 mouse_genomes_project X 150019232 150136193 + MGP_LPJ_P0097487 Wnk3 protein_coding protein_coding MGP_LPJ_T0097488.1 MGP_LPJ_G0036077.1 mouse_genomes_project X 150028842 150051102 + Wnk3 protein_coding processed_transcript MGP_LPJ_T0097489.1 MGP_LPJ_G0036077.1 mouse_genomes_project X 150112346 150138036 + Wnk3 protein_coding processed_transcript MGP_LPJ_T0095766.1 MGP_LPJ_G0035582.1 mouse_genomes_project X 43991916 44030673 - Aifm1 protein_coding retained_intron MGP_LPJ_T0095767.1 MGP_LPJ_G0035582.1 mouse_genomes_project X 43991916 44030806 - MGP_LPJ_P0095767 Aifm1 protein_coding protein_coding MGP_LPJ_T0095768.1 MGP_LPJ_G0035582.1 mouse_genomes_project X 43991916 44030810 - MGP_LPJ_P0095768 Aifm1 protein_coding protein_coding MGP_LPJ_T0095769.1 MGP_LPJ_G0035582.1 mouse_genomes_project X 43991917 43999873 - Aifm1 protein_coding processed_transcript MGP_LPJ_T0095770.1 MGP_LPJ_G0035582.1 mouse_genomes_project X 44002434 44003495 - Aifm1 protein_coding processed_transcript MGP_LPJ_T0097571.1 MGP_LPJ_G0036093.1 mouse_genomes_project X 151994370 152008477 + MGP_LPJ_P0097571 Foxr2 protein_coding protein_coding MGP_LPJ_T0097572.1 MGP_LPJ_G0036093.1 mouse_genomes_project X 152002504 152008477 + MGP_LPJ_P0097572 Foxr2 protein_coding protein_coding MGP_LPJ_T0097336.1 MGP_LPJ_G0036047.1 mouse_genomes_project X 140305935 140306970 - MGP_LPJ_P0097336 protein_coding protein_coding MGP_LPJ_T0097087.1 MGP_LPJ_G0035965.1 mouse_genomes_project X 132339553 132350854 + MGP_LPJ_P0097087 Tmem35a protein_coding protein_coding MGP_LPJ_T0102518.1 MGP_LPJ_G0040554.1 mouse_genomes_project X 133989204 133991681 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0097539.1 MGP_LPJ_G0036084.1 mouse_genomes_project X 151001939 151086106 + MGP_LPJ_P0097539 Iqsec2 protein_coding protein_coding MGP_LPJ_T0097540.1 MGP_LPJ_G0036084.1 mouse_genomes_project X 151001943 151086107 + MGP_LPJ_P0097540 Iqsec2 protein_coding protein_coding MGP_LPJ_T0097541.1 MGP_LPJ_G0036084.1 mouse_genomes_project X 151002144 151052770 + MGP_LPJ_P0097541 Iqsec2 protein_coding unknown_likely_coding MGP_LPJ_T0097542.1 MGP_LPJ_G0036084.1 mouse_genomes_project X 151037175 151062882 + Iqsec2 protein_coding processed_transcript MGP_LPJ_T0097543.1 MGP_LPJ_G0036084.1 mouse_genomes_project X 151037175 151052759 + Iqsec2 protein_coding processed_transcript MGP_LPJ_T0097544.1 MGP_LPJ_G0036084.1 mouse_genomes_project X 151037175 151052759 + Iqsec2 protein_coding processed_transcript MGP_LPJ_T0097545.1 MGP_LPJ_G0036084.1 mouse_genomes_project X 151060189 151084758 + MGP_LPJ_P0097545 Iqsec2 protein_coding protein_coding MGP_LPJ_T0096912.1 MGP_LPJ_G0035902.1 mouse_genomes_project X 103942861 103959169 + MGP_LPJ_P0096912 Pgk1-rs7 protein_coding protein_coding MGP_LPJ_T0096913.1 MGP_LPJ_G0035902.1 mouse_genomes_project X 103942924 103960840 + MGP_LPJ_P0096913 Pgk1-rs7 protein_coding nonsense_mediated_decay MGP_LPJ_T0096914.1 MGP_LPJ_G0035902.1 mouse_genomes_project X 103947413 103950626 + Pgk1-rs7 protein_coding retained_intron MGP_LPJ_T0016801.1 MGP_LPJ_G0014892.1 mouse_genomes_project X 152562542 152563308 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016227.1 MGP_LPJ_G0014318.1 mouse_genomes_project X 32330618 32338938 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099944.1 MGP_LPJ_G0038207.1 mouse_genomes_project X 161239139 161239226 + Gm26317 snRNA snRNA MGP_LPJ_T0016759.1 MGP_LPJ_G0014850.1 mouse_genomes_project X 142817583 142817913 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016504.1 MGP_LPJ_G0014595.1 mouse_genomes_project X 93571845 93572283 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097370.1 MGP_LPJ_G0036059.1 mouse_genomes_project X 142360575 142434732 - MGP_LPJ_P0097370 Dcx protein_coding protein_coding MGP_LPJ_T0097371.1 MGP_LPJ_G0036059.1 mouse_genomes_project X 142365453 142434625 - MGP_LPJ_P0097371 Dcx protein_coding protein_coding MGP_LPJ_T0097372.1 MGP_LPJ_G0036059.1 mouse_genomes_project X 142366519 142434545 - MGP_LPJ_P0097372 Dcx protein_coding protein_coding MGP_LPJ_T0097373.1 MGP_LPJ_G0036059.1 mouse_genomes_project X 142368202 142434640 - MGP_LPJ_P0097373 Dcx protein_coding protein_coding MGP_LPJ_T0097374.1 MGP_LPJ_G0036059.1 mouse_genomes_project X 142373939 142434471 - Dcx protein_coding retained_intron MGP_LPJ_T0097375.1 MGP_LPJ_G0036059.1 mouse_genomes_project X 142378565 142434540 - Dcx protein_coding retained_intron MGP_LPJ_T0097244.1 MGP_LPJ_G0036018.1 mouse_genomes_project X 136000336 137274407 + MGP_LPJ_P0097244 Il1rapl2 protein_coding protein_coding MGP_LPJ_T0097245.1 MGP_LPJ_G0036018.1 mouse_genomes_project X 136000747 136938159 + Il1rapl2 protein_coding retained_intron MGP_LPJ_T0097246.1 MGP_LPJ_G0036018.1 mouse_genomes_project X 136079549 137274085 + MGP_LPJ_P0097246 Il1rapl2 protein_coding protein_coding MGP_LPJ_T0096944.1 MGP_LPJ_G0035912.1 mouse_genomes_project X 105184907 105191032 - MGP_LPJ_P0096944 Itm2a protein_coding protein_coding MGP_LPJ_T0099948.1 MGP_LPJ_G0038211.1 mouse_genomes_project X 162605822 162605942 - Gm26007 snRNA snRNA MGP_LPJ_T0016806.1 MGP_LPJ_G0014897.1 mouse_genomes_project X 154134521 154134881 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097352.1 MGP_LPJ_G0036055.1 mouse_genomes_project X 141591653 141596357 + MGP_LPJ_P0097352 Rgag1 protein_coding protein_coding MGP_LPJ_T0095988.1 MGP_LPJ_G0035665.1 mouse_genomes_project X 66726963 66749519 - MGP_LPJ_P0095988 Ids protein_coding protein_coding MGP_LPJ_T0095989.1 MGP_LPJ_G0035665.1 mouse_genomes_project X 66735469 66745525 - MGP_LPJ_P0095989 Ids protein_coding protein_coding MGP_LPJ_T0095832.1 MGP_LPJ_G0035603.1 mouse_genomes_project X 47474846 47478924 - MGP_LPJ_P0095832 1700080O16Rik protein_coding protein_coding MGP_LPJ_T0095833.1 MGP_LPJ_G0035603.1 mouse_genomes_project X 47475043 47477199 - MGP_LPJ_P0095833 1700080O16Rik protein_coding protein_coding MGP_LPJ_T0016830.1 MGP_LPJ_G0014921.1 mouse_genomes_project X 157361801 157362378 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016232.1 MGP_LPJ_G0014323.1 mouse_genomes_project X 34493938 34494194 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016188.1 MGP_LPJ_G0014279.1 mouse_genomes_project X 11753602 11756265 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097448.1 MGP_LPJ_G0036072.1 mouse_genomes_project X 149434901 149446857 - MGP_LPJ_P0097448 Tro protein_coding protein_coding MGP_LPJ_T0097449.1 MGP_LPJ_G0036072.1 mouse_genomes_project X 149434901 149446710 - MGP_LPJ_P0097449 Tro protein_coding protein_coding MGP_LPJ_T0097450.1 MGP_LPJ_G0036072.1 mouse_genomes_project X 149434905 149446673 - MGP_LPJ_P0097450 Tro protein_coding protein_coding MGP_LPJ_T0097451.1 MGP_LPJ_G0036072.1 mouse_genomes_project X 149434905 149446673 - MGP_LPJ_P0097451 Tro protein_coding protein_coding MGP_LPJ_T0097452.1 MGP_LPJ_G0036072.1 mouse_genomes_project X 149434905 149446710 - MGP_LPJ_P0097452 Tro protein_coding protein_coding MGP_LPJ_T0097453.1 MGP_LPJ_G0036072.1 mouse_genomes_project X 149435023 149445286 - MGP_LPJ_P0097453 Tro protein_coding protein_coding MGP_LPJ_T0097454.1 MGP_LPJ_G0036072.1 mouse_genomes_project X 149438669 149441029 - Tro protein_coding retained_intron MGP_LPJ_T0097455.1 MGP_LPJ_G0036072.1 mouse_genomes_project X 149438822 149446673 - MGP_LPJ_P0097455 Tro protein_coding nonsense_mediated_decay MGP_LPJ_T0097456.1 MGP_LPJ_G0036072.1 mouse_genomes_project X 149438946 149441078 - Tro protein_coding retained_intron MGP_LPJ_T0097457.1 MGP_LPJ_G0036072.1 mouse_genomes_project X 149440662 149442205 - Tro protein_coding retained_intron MGP_LPJ_T0097458.1 MGP_LPJ_G0036072.1 mouse_genomes_project X 149442743 149446646 - MGP_LPJ_P0097458 Tro protein_coding protein_coding MGP_LPJ_T0101161.1 MGP_LPJ_G0039424.1 mouse_genomes_project X 67142407 67142539 + Gm22785 snoRNA snoRNA MGP_LPJ_T0097880.1 MGP_LPJ_G0036176.1 mouse_genomes_project X 169295915 169296224 - MGP_LPJ_P0097880 Gm21860 protein_coding protein_coding MGP_LPJ_T0011245.1 MGP_LPJ_G0009363.1 mouse_genomes_project X 166213079 166213207 + Gm44376 miRNA miRNA MGP_LPJ_T0016447.1 MGP_LPJ_G0014538.1 mouse_genomes_project X 85350698 85351040 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016812.1 MGP_LPJ_G0014903.1 mouse_genomes_project X 154499466 154500302 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016754.1 MGP_LPJ_G0014845.1 mouse_genomes_project X 142627173 142630880 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005627.1 MGP_LPJ_G0004743.1 mouse_genomes_project X 101043509 101044722 - Gm26952 antisense antisense MGP_LPJ_T0095245.1 MGP_LPJ_G0035413.1 mouse_genomes_project X 2482565 2483210 + Otud5 protein_coding processed_transcript MGP_LPJ_T0095246.1 MGP_LPJ_G0035413.1 mouse_genomes_project X 2483032 2519399 + MGP_LPJ_P0095246 Otud5 protein_coding protein_coding MGP_LPJ_T0095247.1 MGP_LPJ_G0035413.1 mouse_genomes_project X 2483057 2517633 + MGP_LPJ_P0095247 Otud5 protein_coding protein_coding MGP_LPJ_T0095248.1 MGP_LPJ_G0035413.1 mouse_genomes_project X 2483257 2518058 + MGP_LPJ_P0095248 Otud5 protein_coding protein_coding MGP_LPJ_T0095249.1 MGP_LPJ_G0035413.1 mouse_genomes_project X 2483283 2518063 + MGP_LPJ_P0095249 Otud5 protein_coding protein_coding MGP_LPJ_T0095250.1 MGP_LPJ_G0035413.1 mouse_genomes_project X 2483317 2519393 + MGP_LPJ_P0095250 Otud5 protein_coding protein_coding MGP_LPJ_T0095251.1 MGP_LPJ_G0035413.1 mouse_genomes_project X 2483806 2518057 + Otud5 protein_coding retained_intron MGP_LPJ_T0095252.1 MGP_LPJ_G0035413.1 mouse_genomes_project X 2483807 2510738 + Otud5 protein_coding retained_intron MGP_LPJ_T0095253.1 MGP_LPJ_G0035413.1 mouse_genomes_project X 2497414 2510338 + Otud5 protein_coding retained_intron MGP_LPJ_T0095949.1 MGP_LPJ_G0035647.1 mouse_genomes_project X 56857786 56859851 - MGP_LPJ_P0095949 Sox3 protein_coding protein_coding MGP_LPJ_T0101191.1 MGP_LPJ_G0039454.1 mouse_genomes_project X 135515595 135515710 - Gm25770 snoRNA snoRNA MGP_LPJ_T0096321.1 MGP_LPJ_G0035730.1 mouse_genomes_project X 70907832 70911010 + Plxna3 protein_coding processed_transcript MGP_LPJ_T0096322.1 MGP_LPJ_G0035730.1 mouse_genomes_project X 70907832 70923456 + MGP_LPJ_P0096322 Plxna3 protein_coding protein_coding MGP_LPJ_T0096323.1 MGP_LPJ_G0035730.1 mouse_genomes_project X 70911223 70923450 + Plxna3 protein_coding retained_intron MGP_LPJ_T0096324.1 MGP_LPJ_G0035730.1 mouse_genomes_project X 70912512 70913470 + Plxna3 protein_coding retained_intron MGP_LPJ_T0096325.1 MGP_LPJ_G0035730.1 mouse_genomes_project X 70913092 70914606 + Plxna3 protein_coding retained_intron MGP_LPJ_T0096326.1 MGP_LPJ_G0035730.1 mouse_genomes_project X 70913998 70915103 + Plxna3 protein_coding retained_intron MGP_LPJ_T0096327.1 MGP_LPJ_G0035730.1 mouse_genomes_project X 70917032 70918083 + Plxna3 protein_coding retained_intron MGP_LPJ_T0096328.1 MGP_LPJ_G0035730.1 mouse_genomes_project X 70917115 70917926 + Plxna3 protein_coding retained_intron MGP_LPJ_T0096329.1 MGP_LPJ_G0035730.1 mouse_genomes_project X 70920353 70922712 + Plxna3 protein_coding retained_intron MGP_LPJ_T0096570.1 MGP_LPJ_G0035808.1 mouse_genomes_project X 91567427 91580721 - MGP_LPJ_P0096570 Fam90a1b protein_coding protein_coding MGP_LPJ_T0096571.1 MGP_LPJ_G0035808.1 mouse_genomes_project X 91568246 91579686 - MGP_LPJ_P0096571 Fam90a1b protein_coding protein_coding MGP_LPJ_T0096572.1 MGP_LPJ_G0035808.1 mouse_genomes_project X 91569530 91579994 - MGP_LPJ_P0096572 Fam90a1b protein_coding protein_coding MGP_LPJ_T0016221.1 MGP_LPJ_G0014312.1 mouse_genomes_project X 31474313 31474688 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016639.1 MGP_LPJ_G0014730.1 mouse_genomes_project X 115609950 115610154 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016814.1 MGP_LPJ_G0014905.1 mouse_genomes_project X 155535162 155536237 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016238.1 MGP_LPJ_G0014329.1 mouse_genomes_project X 35368081 35368752 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097597.1 MGP_LPJ_G0036107.1 mouse_genomes_project X 154247941 154249081 + Acot9 protein_coding processed_transcript MGP_LPJ_T0097598.1 MGP_LPJ_G0036107.1 mouse_genomes_project X 154247941 154285911 + MGP_LPJ_P0097598 Acot9 protein_coding protein_coding MGP_LPJ_T0097599.1 MGP_LPJ_G0036107.1 mouse_genomes_project X 154248003 154285903 + MGP_LPJ_P0097599 Acot9 protein_coding nonsense_mediated_decay MGP_LPJ_T0097600.1 MGP_LPJ_G0036107.1 mouse_genomes_project X 154282099 154285170 + Acot9 protein_coding retained_intron MGP_LPJ_T0095537.1 MGP_LPJ_G0035503.1 mouse_genomes_project X 18858047 18994912 + MGP_LPJ_P0095537 protein_coding protein_coding MGP_LPJ_T0095538.1 MGP_LPJ_G0035503.1 mouse_genomes_project X 18858073 18939997 + protein_coding retained_intron MGP_LPJ_T0095539.1 MGP_LPJ_G0035503.1 mouse_genomes_project X 18858092 18994947 + MGP_LPJ_P0095539 protein_coding protein_coding MGP_LPJ_T0095540.1 MGP_LPJ_G0035503.1 mouse_genomes_project X 18858155 18945327 + MGP_LPJ_P0095540 protein_coding nonsense_mediated_decay MGP_LPJ_T0095541.1 MGP_LPJ_G0035503.1 mouse_genomes_project X 18962891 18967812 + protein_coding retained_intron MGP_LPJ_T0099874.1 MGP_LPJ_G0038137.1 mouse_genomes_project X 6821723 6821830 + Gm26314 snRNA snRNA MGP_LPJ_T0011218.1 MGP_LPJ_G0009336.1 mouse_genomes_project X 103071150 103071238 - Mir384 miRNA miRNA MGP_LPJ_T0099900.1 MGP_LPJ_G0038163.1 mouse_genomes_project X 61041007 61041113 + Gm26111 snRNA snRNA MGP_LPJ_T0096068.1 MGP_LPJ_G0035694.1 mouse_genomes_project X 69786414 69788919 + MGP_LPJ_P0096068 F8a protein_coding protein_coding MGP_LPJ_T0016467.1 MGP_LPJ_G0014558.1 mouse_genomes_project X 88293086 88294110 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016764.1 MGP_LPJ_G0014855.1 mouse_genomes_project X 143739627 143740261 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016207.1 MGP_LPJ_G0014298.1 mouse_genomes_project X 16321126 16321923 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096537.1 MGP_LPJ_G0035800.1 mouse_genomes_project X 90443264 90785599 - MGP_LPJ_P0096537 Pola1 protein_coding protein_coding MGP_LPJ_T0096538.1 MGP_LPJ_G0035800.1 mouse_genomes_project X 90634059 90644564 - Pola1 protein_coding processed_transcript MGP_LPJ_T0096539.1 MGP_LPJ_G0035800.1 mouse_genomes_project X 90776342 90785587 - Pola1 protein_coding retained_intron MGP_LPJ_T0096540.1 MGP_LPJ_G0035800.1 mouse_genomes_project X 90776574 90785559 - Pola1 protein_coding processed_transcript MGP_LPJ_T0097074.1 MGP_LPJ_G0035961.1 mouse_genomes_project X 132113404 132141380 - MGP_LPJ_P0097074 Nox1 protein_coding protein_coding MGP_LPJ_T0097075.1 MGP_LPJ_G0035961.1 mouse_genomes_project X 132114035 132141291 - MGP_LPJ_P0097075 Nox1 protein_coding protein_coding MGP_LPJ_T0097076.1 MGP_LPJ_G0035961.1 mouse_genomes_project X 132114127 132141234 - MGP_LPJ_P0097076 Nox1 protein_coding protein_coding MGP_LPJ_T0097077.1 MGP_LPJ_G0035961.1 mouse_genomes_project X 132136601 132261929 - MGP_LPJ_P0097077 Nox1 protein_coding protein_coding MGP_LPJ_T0097078.1 MGP_LPJ_G0035961.1 mouse_genomes_project X 132136601 132168650 - MGP_LPJ_P0097078 Nox1 protein_coding protein_coding MGP_LPJ_T0097695.1 MGP_LPJ_G0036129.1 mouse_genomes_project X 159881115 160044895 - MGP_LPJ_P0097695 Cdkl5 protein_coding nonsense_mediated_decay MGP_LPJ_T0097696.1 MGP_LPJ_G0036129.1 mouse_genomes_project X 159881115 160044862 - MGP_LPJ_P0097696 Cdkl5 protein_coding nonsense_mediated_decay MGP_LPJ_T0097697.1 MGP_LPJ_G0036129.1 mouse_genomes_project X 159894539 160108268 - MGP_LPJ_P0097697 Cdkl5 protein_coding protein_coding MGP_LPJ_T0097699.1 MGP_LPJ_G0036129.1 mouse_genomes_project X 159909384 159927419 - Cdkl5 protein_coding processed_transcript MGP_LPJ_T0097700.1 MGP_LPJ_G0036129.1 mouse_genomes_project X 159911626 160044862 - MGP_LPJ_P0097700 Cdkl5 protein_coding protein_coding MGP_LPJ_T0097701.1 MGP_LPJ_G0036129.1 mouse_genomes_project X 159957922 159961478 - Cdkl5 protein_coding retained_intron MGP_LPJ_T0016626.1 MGP_LPJ_G0014717.1 mouse_genomes_project X 113470647 113471501 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095979.1 MGP_LPJ_G0035661.1 mouse_genomes_project X 65170513 65213158 + MGP_LPJ_P0095979 Fmr1nb protein_coding protein_coding MGP_LPJ_T0095980.1 MGP_LPJ_G0035661.1 mouse_genomes_project X 65170555 65213158 + MGP_LPJ_P0095980 Fmr1nb protein_coding protein_coding MGP_LPJ_T0095981.1 MGP_LPJ_G0035661.1 mouse_genomes_project X 65170608 65213158 + MGP_LPJ_P0095981 Fmr1nb protein_coding protein_coding MGP_LPJ_T0016336.1 MGP_LPJ_G0014427.1 mouse_genomes_project X 59180613 59181526 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016351.1 MGP_LPJ_G0014442.1 mouse_genomes_project X 63334545 63335065 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002508.1 MGP_LPJ_G0002414.1 mouse_genomes_project X 151164962 151166438 - TEC TEC MGP_LPJ_T0016696.1 MGP_LPJ_G0014787.1 mouse_genomes_project X 133008369 133009002 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016637.1 MGP_LPJ_G0014728.1 mouse_genomes_project X 115594026 115594230 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016314.1 MGP_LPJ_G0014405.1 mouse_genomes_project X 55999564 56000160 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016787.1 MGP_LPJ_G0014878.1 mouse_genomes_project X 149974765 149975125 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016594.1 MGP_LPJ_G0014685.1 mouse_genomes_project X 107696388 107701987 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098385.1 MGP_LPJ_G0036666.1 mouse_genomes_project X 151732741 151732982 + Gm24687 ribozyme ribozyme MGP_LPJ_T0011145.1 MGP_LPJ_G0009263.1 mouse_genomes_project X 16014313 16014370 - Mir5617 miRNA miRNA MGP_LPJ_T0016666.1 MGP_LPJ_G0014757.1 mouse_genomes_project X 124816322 124816686 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101185.1 MGP_LPJ_G0039448.1 mouse_genomes_project X 128849008 128849137 - Gm25170 snoRNA snoRNA MGP_LPJ_T0095640.1 MGP_LPJ_G0035552.1 mouse_genomes_project X 33544596 33602544 - MGP_LPJ_P0095640 Tmem255a protein_coding protein_coding MGP_LPJ_T0095641.1 MGP_LPJ_G0035552.1 mouse_genomes_project X 33545329 33602554 - Tmem255a protein_coding retained_intron MGP_LPJ_T0095642.1 MGP_LPJ_G0035552.1 mouse_genomes_project X 33545329 33602554 - MGP_LPJ_P0095642 Tmem255a protein_coding protein_coding MGP_LPJ_T0095643.1 MGP_LPJ_G0035552.1 mouse_genomes_project X 33545329 33602554 - MGP_LPJ_P0095643 Tmem255a protein_coding protein_coding MGP_LPJ_T0095644.1 MGP_LPJ_G0035552.1 mouse_genomes_project X 33564417 33602516 - Tmem255a protein_coding processed_transcript MGP_LPJ_T0016476.1 MGP_LPJ_G0014567.1 mouse_genomes_project X 89213969 89214164 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009454.1 MGP_LPJ_G0007580.1 mouse_genomes_project X 160985601 160997305 - Gm15205 lincRNA lincRNA MGP_LPJ_T0011770.1 MGP_LPJ_G0009888.1 mouse_genomes_project X 48883474 48883781 + Gm23718 misc_RNA misc_RNA MGP_LPJ_T0016761.1 MGP_LPJ_G0014852.1 mouse_genomes_project X 143075184 143076315 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011777.1 MGP_LPJ_G0009895.1 mouse_genomes_project X 101124546 101124614 - Gm27733 misc_RNA misc_RNA MGP_LPJ_T0095633.1 MGP_LPJ_G0035547.1 mouse_genomes_project X 33397253 33422243 + MGP_LPJ_P0095633 Rhox10 protein_coding protein_coding MGP_LPJ_T0011194.1 MGP_LPJ_G0009312.1 mouse_genomes_project X 68027987 68028079 - Gm23945 miRNA miRNA MGP_LPJ_T0016404.1 MGP_LPJ_G0014495.1 mouse_genomes_project X 74427189 74429440 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016677.1 MGP_LPJ_G0014768.1 mouse_genomes_project X 129135076 129136386 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016487.1 MGP_LPJ_G0014578.1 mouse_genomes_project X 91525541 91526394 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095771.1 MGP_LPJ_G0035583.1 mouse_genomes_project X 44036519 44047467 + MGP_LPJ_P0095771 Rab33a protein_coding protein_coding MGP_LPJ_T0097673.1 MGP_LPJ_G0036124.1 mouse_genomes_project X 159220367 159236422 - MGP_LPJ_P0097673 Pdha1 protein_coding protein_coding MGP_LPJ_T0097674.1 MGP_LPJ_G0036124.1 mouse_genomes_project X 159225449 159227124 - Pdha1 protein_coding retained_intron MGP_LPJ_T0097675.1 MGP_LPJ_G0036124.1 mouse_genomes_project X 159227446 159236318 - Pdha1 protein_coding retained_intron MGP_LPJ_T0097676.1 MGP_LPJ_G0036124.1 mouse_genomes_project X 159234905 159236365 - Pdha1 protein_coding processed_transcript MGP_LPJ_T0096615.1 MGP_LPJ_G0035820.1 mouse_genomes_project X 93471374 93548390 + MGP_LPJ_P0096615 Msn protein_coding protein_coding MGP_LPJ_T0096616.1 MGP_LPJ_G0035820.1 mouse_genomes_project X 93471389 93533209 + Msn protein_coding processed_transcript MGP_LPJ_T0096617.1 MGP_LPJ_G0035820.1 mouse_genomes_project X 93471429 93531129 + Msn protein_coding processed_transcript MGP_LPJ_T0097118.1 MGP_LPJ_G0035974.1 mouse_genomes_project X 132667424 132673628 + MGP_LPJ_P0097118 protein_coding protein_coding MGP_LPJ_T0097119.1 MGP_LPJ_G0035974.1 mouse_genomes_project X 132667503 132672893 + MGP_LPJ_P0097119 protein_coding protein_coding MGP_LPJ_T0097120.1 MGP_LPJ_G0035974.1 mouse_genomes_project X 132667516 132672700 + MGP_LPJ_P0097120 protein_coding protein_coding MGP_LPJ_T0097166.1 MGP_LPJ_G0035988.1 mouse_genomes_project X 133907689 133948106 - MGP_LPJ_P0097166 Tcp11x2 protein_coding protein_coding MGP_LPJ_T0016599.1 MGP_LPJ_G0014690.1 mouse_genomes_project X 109478597 109479145 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005632.1 MGP_LPJ_G0004747.1 mouse_genomes_project X 150109800 150164281 - A230072E10Rik antisense antisense MGP_LPJ_T0005633.1 MGP_LPJ_G0004747.1 mouse_genomes_project X 150111050 150129290 - A230072E10Rik antisense antisense MGP_LPJ_T0005634.1 MGP_LPJ_G0004747.1 mouse_genomes_project X 150111050 150117112 - A230072E10Rik antisense antisense MGP_LPJ_T0005635.1 MGP_LPJ_G0004747.1 mouse_genomes_project X 150131216 150161314 - A230072E10Rik antisense antisense MGP_LPJ_T0011780.1 MGP_LPJ_G0009898.1 mouse_genomes_project X 101161310 101161433 + Gm27875 misc_RNA misc_RNA MGP_LPJ_T0095545.1 MGP_LPJ_G0035506.1 mouse_genomes_project X 31154803 31335133 + MGP_LPJ_P0095545 Dock11 protein_coding protein_coding MGP_LPJ_T0095546.1 MGP_LPJ_G0035506.1 mouse_genomes_project X 31206778 31335127 + MGP_LPJ_P0095546 Dock11 protein_coding protein_coding MGP_LPJ_T0095547.1 MGP_LPJ_G0035506.1 mouse_genomes_project X 31234299 31243251 + Dock11 protein_coding retained_intron MGP_LPJ_T0095548.1 MGP_LPJ_G0035506.1 mouse_genomes_project X 31270826 31276097 + Dock11 protein_coding retained_intron MGP_LPJ_T0095549.1 MGP_LPJ_G0035506.1 mouse_genomes_project X 31300236 31334798 + MGP_LPJ_P0095549 Dock11 protein_coding protein_coding MGP_LPJ_T0101200.1 MGP_LPJ_G0039463.1 mouse_genomes_project X 155456160 155456257 - Gm23404 snoRNA snoRNA MGP_LPJ_T0102523.1 MGP_LPJ_G0040559.1 mouse_genomes_project X 150965207 150966810 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0016285.1 MGP_LPJ_G0014376.1 mouse_genomes_project X 47339722 47340255 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096503.1 MGP_LPJ_G0035782.1 mouse_genomes_project X 82115170 82136422 + MGP_LPJ_P0096503 Fthl17a protein_coding protein_coding MGP_LPJ_T0016809.1 MGP_LPJ_G0014900.1 mouse_genomes_project X 154292947 154294498 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016486.1 MGP_LPJ_G0014577.1 mouse_genomes_project X 91525451 91526399 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095600.1 MGP_LPJ_G0035530.1 mouse_genomes_project X 32738271 32923798 + MGP_LPJ_P0095600 protein_coding protein_coding MGP_LPJ_T0016363.1 MGP_LPJ_G0014454.1 mouse_genomes_project X 66803342 66853663 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016441.1 MGP_LPJ_G0014532.1 mouse_genomes_project X 83228070 83229706 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097394.1 MGP_LPJ_G0036063.1 mouse_genomes_project X 143802830 143857042 - MGP_LPJ_P0097394 Lhfpl1 protein_coding protein_coding MGP_LPJ_T0097395.1 MGP_LPJ_G0036063.1 mouse_genomes_project X 143849114 143857181 - MGP_LPJ_P0097395 Lhfpl1 protein_coding protein_coding MGP_LPJ_T0005605.1 MGP_LPJ_G0004724.1 mouse_genomes_project X 44879059 44977359 - Gm14697 antisense antisense MGP_LPJ_T0099923.1 MGP_LPJ_G0038186.1 mouse_genomes_project X 110982833 110982959 - Gm24831 snRNA snRNA MGP_LPJ_T0099912.1 MGP_LPJ_G0038175.1 mouse_genomes_project X 98703182 98703316 + Gm22472 snRNA snRNA MGP_LPJ_T0016378.1 MGP_LPJ_G0014469.1 mouse_genomes_project X 70573380 70574181 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098362.1 MGP_LPJ_G0036643.1 mouse_genomes_project X 161391133 161391261 + Gm27490 rRNA rRNA MGP_LPJ_T0011226.1 MGP_LPJ_G0009344.1 mouse_genomes_project X 134476049 134476165 + Mir6383 miRNA miRNA MGP_LPJ_T0016322.1 MGP_LPJ_G0014413.1 mouse_genomes_project X 56941181 56941906 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016176.1 MGP_LPJ_G0014267.1 mouse_genomes_project X 8281900 8283127 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095352.1 MGP_LPJ_G0035447.1 mouse_genomes_project X 4342991 4381625 - MGP_LPJ_P0095352 Cybb protein_coding protein_coding MGP_LPJ_T0095353.1 MGP_LPJ_G0035447.1 mouse_genomes_project X 4354607 4381570 - MGP_LPJ_P0095353 Cybb protein_coding nonsense_mediated_decay MGP_LPJ_T0095354.1 MGP_LPJ_G0035447.1 mouse_genomes_project X 4357062 4359212 - Cybb protein_coding retained_intron MGP_LPJ_T0095355.1 MGP_LPJ_G0035447.1 mouse_genomes_project X 4364696 4400853 - MGP_LPJ_P0095355 Cybb protein_coding protein_coding MGP_LPJ_T0095356.1 MGP_LPJ_G0035447.1 mouse_genomes_project X 4377289 4381571 - Cybb protein_coding retained_intron MGP_LPJ_T0101149.1 MGP_LPJ_G0039412.1 mouse_genomes_project X 16695805 16695936 - Gm22592 snoRNA snoRNA MGP_LPJ_T0096530.1 MGP_LPJ_G0035796.1 mouse_genomes_project X 89249090 89745735 - MGP_LPJ_P0096530 Mageb18 protein_coding protein_coding MGP_LPJ_T0096531.1 MGP_LPJ_G0035796.1 mouse_genomes_project X 89249422 89250993 - MGP_LPJ_P0096531 Mageb18 protein_coding protein_coding MGP_LPJ_T0099885.1 MGP_LPJ_G0038148.1 mouse_genomes_project X 31633074 31633178 + Gm25047 snRNA snRNA MGP_LPJ_T0016457.1 MGP_LPJ_G0014548.1 mouse_genomes_project X 86096777 86098257 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095558.1 MGP_LPJ_G0035510.1 mouse_genomes_project X 31674880 31676059 + MGP_LPJ_P0095558 protein_coding protein_coding MGP_LPJ_T0016648.1 MGP_LPJ_G0014739.1 mouse_genomes_project X 118135257 118135711 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016214.1 MGP_LPJ_G0014305.1 mouse_genomes_project X 17630568 17631052 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096381.1 MGP_LPJ_G0035742.1 mouse_genomes_project X 71235486 71242571 - MGP_LPJ_P0096381 protein_coding protein_coding MGP_LPJ_T0016554.1 MGP_LPJ_G0014645.1 mouse_genomes_project X 101199525 101199750 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097441.1 MGP_LPJ_G0036071.1 mouse_genomes_project X 149377669 149409596 + MGP_LPJ_P0097441 Pfkfb1 protein_coding protein_coding MGP_LPJ_T0097442.1 MGP_LPJ_G0036071.1 mouse_genomes_project X 149377696 149403580 + Pfkfb1 protein_coding processed_transcript MGP_LPJ_T0097443.1 MGP_LPJ_G0036071.1 mouse_genomes_project X 149379361 149433476 + MGP_LPJ_P0097443 Pfkfb1 protein_coding protein_coding MGP_LPJ_T0097444.1 MGP_LPJ_G0036071.1 mouse_genomes_project X 149383918 149433476 + MGP_LPJ_P0097444 Pfkfb1 protein_coding protein_coding MGP_LPJ_T0097445.1 MGP_LPJ_G0036071.1 mouse_genomes_project X 149384050 149433455 + Pfkfb1 protein_coding retained_intron MGP_LPJ_T0097446.1 MGP_LPJ_G0036071.1 mouse_genomes_project X 149404581 149409119 + Pfkfb1 protein_coding processed_transcript MGP_LPJ_T0097447.1 MGP_LPJ_G0036071.1 mouse_genomes_project X 149409753 149431575 + Pfkfb1 protein_coding processed_transcript MGP_LPJ_T0097037.1 MGP_LPJ_G0035947.1 mouse_genomes_project X 121963609 121967783 + MGP_LPJ_P0097037 protein_coding protein_coding MGP_LPJ_T0095876.1 MGP_LPJ_G0035626.1 mouse_genomes_project X 52429666 52435399 - MGP_LPJ_P0095876 Gm648 protein_coding protein_coding MGP_LPJ_T0095567.1 MGP_LPJ_G0035515.1 mouse_genomes_project X 32097726 32142391 - MGP_LPJ_P0095567 C330007P06Rik protein_coding protein_coding MGP_LPJ_T0095568.1 MGP_LPJ_G0035515.1 mouse_genomes_project X 32114076 32132410 - C330007P06Rik protein_coding retained_intron MGP_LPJ_T0095569.1 MGP_LPJ_G0035515.1 mouse_genomes_project X 32126441 32142285 - MGP_LPJ_P0095569 C330007P06Rik protein_coding unknown_likely_coding MGP_LPJ_T0095570.1 MGP_LPJ_G0035515.1 mouse_genomes_project X 32126476 32142326 - C330007P06Rik protein_coding processed_transcript MGP_LPJ_T0095571.1 MGP_LPJ_G0035515.1 mouse_genomes_project X 32131878 32142308 - C330007P06Rik protein_coding retained_intron MGP_LPJ_T0096602.1 MGP_LPJ_G0035816.1 mouse_genomes_project X 92795837 92803623 - MGP_LPJ_P0096602 Asb12 protein_coding protein_coding MGP_LPJ_T0096067.1 MGP_LPJ_G0035693.1 mouse_genomes_project X 69691811 69698122 - MGP_LPJ_P0096067 protein_coding protein_coding MGP_LPJ_T0096835.1 MGP_LPJ_G0035874.1 mouse_genomes_project X 100351860 100400438 + MGP_LPJ_P0096835 1700031F05Rik protein_coding protein_coding MGP_LPJ_T0016206.1 MGP_LPJ_G0014297.1 mouse_genomes_project X 16066827 16067026 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016320.1 MGP_LPJ_G0014411.1 mouse_genomes_project X 56780883 56781458 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095427.1 MGP_LPJ_G0035466.1 mouse_genomes_project X 8698360 8705421 + MGP_LPJ_P0095427 Gpr82 protein_coding protein_coding MGP_LPJ_T0011234.1 MGP_LPJ_G0009352.1 mouse_genomes_project X 145514664 145514751 + Mir1912 miRNA miRNA MGP_LPJ_T0016531.1 MGP_LPJ_G0014622.1 mouse_genomes_project X 99270841 99271721 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009452.1 MGP_LPJ_G0007578.1 mouse_genomes_project X 160443830 160466169 + lincRNA lincRNA MGP_LPJ_T0095550.1 MGP_LPJ_G0035507.1 mouse_genomes_project X 31372758 31431999 + MGP_LPJ_P0095550 Il13ra1 protein_coding protein_coding MGP_LPJ_T0095956.1 MGP_LPJ_G0035653.1 mouse_genomes_project X 60373540 60378771 + MGP_LPJ_P0095956 3830417A13Rik protein_coding protein_coding MGP_LPJ_T0095957.1 MGP_LPJ_G0035653.1 mouse_genomes_project X 60374340 60377500 + MGP_LPJ_P0095957 3830417A13Rik protein_coding protein_coding MGP_LPJ_T0005603.1 MGP_LPJ_G0004722.1 mouse_genomes_project X 32201908 32203060 + Gm15008 antisense antisense MGP_LPJ_T0096526.1 MGP_LPJ_G0035792.1 mouse_genomes_project X 86932654 86935409 - MGP_LPJ_P0096526 4930415L06Rik protein_coding protein_coding MGP_LPJ_T0095272.1 MGP_LPJ_G0035418.1 mouse_genomes_project X 2554106 2554249 - MGP_LPJ_P0095272 protein_coding protein_coding MGP_LPJ_T0009396.1 MGP_LPJ_G0007544.1 mouse_genomes_project X 52186545 52192123 + lincRNA lincRNA MGP_LPJ_T0009397.1 MGP_LPJ_G0007544.1 mouse_genomes_project X 52186603 52190983 + lincRNA lincRNA MGP_LPJ_T0016731.1 MGP_LPJ_G0014822.1 mouse_genomes_project X 139302333 139304872 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097845.1 MGP_LPJ_G0036169.1 mouse_genomes_project X 166717945 167427516 - MGP_LPJ_P0097845 Frmpd4 protein_coding protein_coding MGP_LPJ_T0097846.1 MGP_LPJ_G0036169.1 mouse_genomes_project X 166717945 167870100 - MGP_LPJ_P0097846 Frmpd4 protein_coding protein_coding MGP_LPJ_T0097847.1 MGP_LPJ_G0036169.1 mouse_genomes_project X 166717949 167183627 - MGP_LPJ_P0097847 Frmpd4 protein_coding protein_coding MGP_LPJ_T0097848.1 MGP_LPJ_G0036169.1 mouse_genomes_project X 166721934 167010265 - MGP_LPJ_P0097848 Frmpd4 protein_coding protein_coding MGP_LPJ_T0011168.1 MGP_LPJ_G0009286.1 mouse_genomes_project X 48624197 48624292 - Mir322 miRNA miRNA MGP_LPJ_T0016197.1 MGP_LPJ_G0014288.1 mouse_genomes_project X 14891315 14891648 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016309.1 MGP_LPJ_G0014400.1 mouse_genomes_project X 54541229 54542061 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016148.1 MGP_LPJ_G0014239.1 mouse_genomes_project X 3388501 3388861 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098357.1 MGP_LPJ_G0036638.1 mouse_genomes_project X 150833755 150833862 + n-R5s14 rRNA rRNA MGP_LPJ_T0096656.1 MGP_LPJ_G0035830.1 mouse_genomes_project X 96406649 96471698 + MGP_LPJ_P0096656 Stard8 protein_coding protein_coding MGP_LPJ_T0096657.1 MGP_LPJ_G0035830.1 mouse_genomes_project X 96448654 96480752 + MGP_LPJ_P0096657 Stard8 protein_coding protein_coding MGP_LPJ_T0096658.1 MGP_LPJ_G0035830.1 mouse_genomes_project X 96450057 96471849 + Stard8 protein_coding processed_transcript MGP_LPJ_T0096659.1 MGP_LPJ_G0035830.1 mouse_genomes_project X 96474633 96476470 + Stard8 protein_coding processed_transcript MGP_LPJ_T0097051.1 MGP_LPJ_G0035955.1 mouse_genomes_project X 131597526 131707262 - MGP_LPJ_P0097051 protein_coding protein_coding MGP_LPJ_T0097052.1 MGP_LPJ_G0035955.1 mouse_genomes_project X 131597541 131705541 - MGP_LPJ_P0097052 protein_coding protein_coding MGP_LPJ_T0097053.1 MGP_LPJ_G0035955.1 mouse_genomes_project X 131597545 131704170 - MGP_LPJ_P0097053 protein_coding protein_coding MGP_LPJ_T0097054.1 MGP_LPJ_G0035955.1 mouse_genomes_project X 131597546 131602678 - MGP_LPJ_P0097054 protein_coding nonsense_mediated_decay MGP_LPJ_T0097055.1 MGP_LPJ_G0035955.1 mouse_genomes_project X 131699642 131703268 - protein_coding processed_transcript MGP_LPJ_T0096150.1 MGP_LPJ_G0035712.1 mouse_genomes_project X 70454026 70474513 - MGP_LPJ_P0096150 Arhgap4 protein_coding protein_coding MGP_LPJ_T0096155.1 MGP_LPJ_G0035712.1 mouse_genomes_project X 70456936 70474507 - MGP_LPJ_P0096155 Arhgap4 protein_coding protein_coding MGP_LPJ_T0096156.1 MGP_LPJ_G0035712.1 mouse_genomes_project X 70456942 70474473 - MGP_LPJ_P0096156 Arhgap4 protein_coding protein_coding MGP_LPJ_T0096157.1 MGP_LPJ_G0035712.1 mouse_genomes_project X 70457116 70474448 - Arhgap4 protein_coding retained_intron MGP_LPJ_T0096158.1 MGP_LPJ_G0035712.1 mouse_genomes_project X 70457116 70474448 - Arhgap4 protein_coding retained_intron MGP_LPJ_T0096159.1 MGP_LPJ_G0035712.1 mouse_genomes_project X 70457116 70474448 - Arhgap4 protein_coding retained_intron MGP_LPJ_T0096160.1 MGP_LPJ_G0035712.1 mouse_genomes_project X 70457116 70474448 - Arhgap4 protein_coding retained_intron MGP_LPJ_T0096161.1 MGP_LPJ_G0035712.1 mouse_genomes_project X 70457116 70474448 - Arhgap4 protein_coding retained_intron MGP_LPJ_T0096162.1 MGP_LPJ_G0035712.1 mouse_genomes_project X 70457116 70474448 - MGP_LPJ_P0096162 Arhgap4 protein_coding nonsense_mediated_decay MGP_LPJ_T0096163.1 MGP_LPJ_G0035712.1 mouse_genomes_project X 70457116 70474448 - MGP_LPJ_P0096163 Arhgap4 protein_coding protein_coding MGP_LPJ_T0096164.1 MGP_LPJ_G0035712.1 mouse_genomes_project X 70457122 70474448 - MGP_LPJ_P0096164 Arhgap4 protein_coding nonsense_mediated_decay MGP_LPJ_T0096165.1 MGP_LPJ_G0035712.1 mouse_genomes_project X 70457260 70474406 - MGP_LPJ_P0096165 Arhgap4 protein_coding protein_coding MGP_LPJ_T0096166.1 MGP_LPJ_G0035712.1 mouse_genomes_project X 70458995 70460011 - Arhgap4 protein_coding processed_transcript MGP_LPJ_T0096167.1 MGP_LPJ_G0035712.1 mouse_genomes_project X 70459398 70460651 - MGP_LPJ_P0096167 Arhgap4 protein_coding protein_coding MGP_LPJ_T0096168.1 MGP_LPJ_G0035712.1 mouse_genomes_project X 70459455 70462211 - MGP_LPJ_P0096168 Arhgap4 protein_coding protein_coding MGP_LPJ_T0096169.1 MGP_LPJ_G0035712.1 mouse_genomes_project X 70461897 70485054 - Arhgap4 protein_coding retained_intron MGP_LPJ_T0096170.1 MGP_LPJ_G0035712.1 mouse_genomes_project X 70461901 70463323 - Arhgap4 protein_coding processed_transcript MGP_LPJ_T0096171.1 MGP_LPJ_G0035712.1 mouse_genomes_project X 70462693 70468835 - MGP_LPJ_P0096171 Arhgap4 protein_coding protein_coding MGP_LPJ_T0096172.1 MGP_LPJ_G0035712.1 mouse_genomes_project X 70469563 70474475 - Arhgap4 protein_coding processed_transcript MGP_LPJ_T0096173.1 MGP_LPJ_G0035712.1 mouse_genomes_project X 70469956 70474470 - MGP_LPJ_P0096173 Arhgap4 protein_coding nonsense_mediated_decay MGP_LPJ_T0016472.1 MGP_LPJ_G0014563.1 mouse_genomes_project X 88620585 88621534 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016512.1 MGP_LPJ_G0014603.1 mouse_genomes_project X 94531243 94532507 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016860.1 MGP_LPJ_G0014951.1 mouse_genomes_project X 163689457 163692162 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101157.1 MGP_LPJ_G0039420.1 mouse_genomes_project X 60726313 60726387 + Gm24598 snoRNA snoRNA MGP_LPJ_T0009389.1 MGP_LPJ_G0007539.1 mouse_genomes_project X 32087132 32089506 - Mdrl lincRNA lincRNA MGP_LPJ_T0016160.1 MGP_LPJ_G0014251.1 mouse_genomes_project X 5662030 5662463 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096461.1 MGP_LPJ_G0035769.1 mouse_genomes_project X 74819180 74825571 - MGP_LPJ_P0096461 Obp1a protein_coding protein_coding MGP_LPJ_T0095634.1 MGP_LPJ_G0035548.1 mouse_genomes_project X 33407372 33415888 - MGP_LPJ_P0095634 Rhox11 protein_coding protein_coding MGP_LPJ_T0095347.1 MGP_LPJ_G0035442.1 mouse_genomes_project X 3928236 3928914 + MGP_LPJ_P0095347 protein_coding protein_coding MGP_LPJ_T0099929.1 MGP_LPJ_G0038192.1 mouse_genomes_project X 125770078 125770185 - Gm25061 snRNA snRNA MGP_LPJ_T0099893.1 MGP_LPJ_G0038156.1 mouse_genomes_project X 43811248 43811349 + Gm22612 snRNA snRNA MGP_LPJ_T0011146.1 MGP_LPJ_G0009264.1 mouse_genomes_project X 19168238 19168340 + Gm25299 miRNA miRNA MGP_LPJ_T0096457.1 MGP_LPJ_G0035766.1 mouse_genomes_project X 74555991 74574097 - MGP_LPJ_P0096457 Pbsn protein_coding protein_coding MGP_LPJ_T0096458.1 MGP_LPJ_G0035766.1 mouse_genomes_project X 74555992 74574004 - MGP_LPJ_P0096458 Pbsn protein_coding protein_coding MGP_LPJ_T0016425.1 MGP_LPJ_G0014516.1 mouse_genomes_project X 78604319 78608102 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016769.1 MGP_LPJ_G0014860.1 mouse_genomes_project X 144344710 144345528 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016240.1 MGP_LPJ_G0014331.1 mouse_genomes_project X 35510368 35510917 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011213.1 MGP_LPJ_G0009331.1 mouse_genomes_project X 101254327 101254403 - Mir421 miRNA miRNA MGP_LPJ_T0016841.1 MGP_LPJ_G0014932.1 mouse_genomes_project X 159413432 159413914 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016829.1 MGP_LPJ_G0014920.1 mouse_genomes_project X 157290808 157291382 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096703.1 MGP_LPJ_G0035844.1 mouse_genomes_project X 98172019 98174603 + Gdpd2 protein_coding processed_transcript MGP_LPJ_T0096704.1 MGP_LPJ_G0035844.1 mouse_genomes_project X 98172084 98177368 + Gdpd2 protein_coding retained_intron MGP_LPJ_T0096705.1 MGP_LPJ_G0035844.1 mouse_genomes_project X 98172088 98181049 + MGP_LPJ_P0096705 Gdpd2 protein_coding protein_coding MGP_LPJ_T0096706.1 MGP_LPJ_G0035844.1 mouse_genomes_project X 98172332 98181049 + MGP_LPJ_P0096706 Gdpd2 protein_coding protein_coding MGP_LPJ_T0096707.1 MGP_LPJ_G0035844.1 mouse_genomes_project X 98178494 98181050 + Gdpd2 protein_coding retained_intron MGP_LPJ_T0096849.1 MGP_LPJ_G0035883.1 mouse_genomes_project X 101076578 101086347 + MGP_LPJ_P0096849 Tsx protein_coding protein_coding MGP_LPJ_T0102490.1 MGP_LPJ_G0040526.1 mouse_genomes_project X 51634222 51648035 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0016419.1 MGP_LPJ_G0014510.1 mouse_genomes_project X 76923728 76923887 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016352.1 MGP_LPJ_G0014443.1 mouse_genomes_project X 63535385 63536003 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097672.1 MGP_LPJ_G0036123.1 mouse_genomes_project X 159082723 159221510 + MGP_LPJ_P0097672 Map3k15 protein_coding protein_coding MGP_LPJ_T0016750.1 MGP_LPJ_G0014841.1 mouse_genomes_project X 141017095 141017527 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016465.1 MGP_LPJ_G0014556.1 mouse_genomes_project X 87709483 87710000 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016181.1 MGP_LPJ_G0014272.1 mouse_genomes_project X 9357234 9358100 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095505.1 MGP_LPJ_G0035491.1 mouse_genomes_project X 16081660 16087762 - MGP_LPJ_P0095505 Cfp protein_coding protein_coding MGP_LPJ_T0095506.1 MGP_LPJ_G0035491.1 mouse_genomes_project X 16081857 16083821 - Cfp protein_coding processed_transcript MGP_LPJ_T0096639.1 MGP_LPJ_G0035827.1 mouse_genomes_project X 95537759 95715093 + MGP_LPJ_P0096639 Ar protein_coding protein_coding MGP_LPJ_T0102479.1 MGP_LPJ_G0040515.1 mouse_genomes_project X 4482940 4483202 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0097280.1 MGP_LPJ_G0036031.1 mouse_genomes_project X 138307810 138359565 - MGP_LPJ_P0097280 Morc4 protein_coding protein_coding MGP_LPJ_T0097281.1 MGP_LPJ_G0036031.1 mouse_genomes_project X 138308082 138359588 - MGP_LPJ_P0097281 Morc4 protein_coding protein_coding MGP_LPJ_T0097282.1 MGP_LPJ_G0036031.1 mouse_genomes_project X 138308853 138344990 - MGP_LPJ_P0097282 Morc4 protein_coding protein_coding MGP_LPJ_T0097283.1 MGP_LPJ_G0036031.1 mouse_genomes_project X 138310409 138323695 - Morc4 protein_coding retained_intron MGP_LPJ_T0097284.1 MGP_LPJ_G0036031.1 mouse_genomes_project X 138324064 138342054 - MGP_LPJ_P0097284 Morc4 protein_coding protein_coding MGP_LPJ_T0097285.1 MGP_LPJ_G0036031.1 mouse_genomes_project X 138343447 138359536 - Morc4 protein_coding retained_intron MGP_LPJ_T0097286.1 MGP_LPJ_G0036031.1 mouse_genomes_project X 138343454 138359533 - Morc4 protein_coding processed_transcript MGP_LPJ_T0097287.1 MGP_LPJ_G0036031.1 mouse_genomes_project X 138345861 138359321 - Morc4 protein_coding retained_intron MGP_LPJ_T0097288.1 MGP_LPJ_G0036031.1 mouse_genomes_project X 138345895 138359284 - MGP_LPJ_P0097288 Morc4 protein_coding nonsense_mediated_decay MGP_LPJ_T0097289.1 MGP_LPJ_G0036031.1 mouse_genomes_project X 138346009 138359110 - MGP_LPJ_P0097289 Morc4 protein_coding protein_coding MGP_LPJ_T0009381.1 MGP_LPJ_G0007534.1 mouse_genomes_project X 11079198 11081872 - lincRNA lincRNA MGP_LPJ_T0011143.1 MGP_LPJ_G0009261.1 mouse_genomes_project X 14290018 14290097 - Mir222 miRNA miRNA MGP_LPJ_T0016316.1 MGP_LPJ_G0014407.1 mouse_genomes_project X 56537290 56539223 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098384.1 MGP_LPJ_G0036665.1 mouse_genomes_project X 78966011 78966230 + Gm26174 ribozyme ribozyme MGP_LPJ_T0016614.1 MGP_LPJ_G0014705.1 mouse_genomes_project X 111671850 111673201 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016171.1 MGP_LPJ_G0014262.1 mouse_genomes_project X 7664867 7665227 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016685.1 MGP_LPJ_G0014776.1 mouse_genomes_project X 131234389 131235423 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016877.1 MGP_LPJ_G0014968.1 mouse_genomes_project X 168062652 168063052 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096995.1 MGP_LPJ_G0035931.1 mouse_genomes_project X 110025348 110043542 - MGP_LPJ_P0096995 Satl1 protein_coding protein_coding MGP_LPJ_T0096996.1 MGP_LPJ_G0035931.1 mouse_genomes_project X 110025350 110044499 - MGP_LPJ_P0096996 Satl1 protein_coding protein_coding MGP_LPJ_T0016429.1 MGP_LPJ_G0014520.1 mouse_genomes_project X 79537206 79538215 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016410.1 MGP_LPJ_G0014501.1 mouse_genomes_project X 75139995 75141077 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011799.1 MGP_LPJ_G0009917.1 mouse_genomes_project X 161883988 161884303 + Gm25557 misc_RNA misc_RNA MGP_LPJ_T0016455.1 MGP_LPJ_G0014546.1 mouse_genomes_project X 86037637 86038803 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101163.1 MGP_LPJ_G0039426.1 mouse_genomes_project X 70367299 70367364 + Gm23615 snoRNA snoRNA MGP_LPJ_T0016766.1 MGP_LPJ_G0014857.1 mouse_genomes_project X 144111547 144112012 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016511.1 MGP_LPJ_G0014602.1 mouse_genomes_project X 94428702 94429507 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016848.1 MGP_LPJ_G0014939.1 mouse_genomes_project X 161866654 161867109 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016813.1 MGP_LPJ_G0014904.1 mouse_genomes_project X 154910876 154911783 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095341.1 MGP_LPJ_G0035437.1 mouse_genomes_project X 3259279 3306300 - MGP_LPJ_P0095341 protein_coding protein_coding MGP_LPJ_T0016421.1 MGP_LPJ_G0014512.1 mouse_genomes_project X 77250939 77252809 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096517.1 MGP_LPJ_G0035786.1 mouse_genomes_project X 82923394 82926507 + MGP_LPJ_P0096517 Samt3 protein_coding protein_coding MGP_LPJ_T0016621.1 MGP_LPJ_G0014712.1 mouse_genomes_project X 112624488 112624947 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011166.1 MGP_LPJ_G0009284.1 mouse_genomes_project X 48623197 48623295 - Mir351 miRNA miRNA MGP_LPJ_T0096968.1 MGP_LPJ_G0035921.1 mouse_genomes_project X 107055685 107057508 + MGP_LPJ_P0096968 Gm6377 protein_coding protein_coding MGP_LPJ_T0096969.1 MGP_LPJ_G0035921.1 mouse_genomes_project X 107055687 107059369 + MGP_LPJ_P0096969 Gm6377 protein_coding protein_coding MGP_LPJ_T0009378.1 MGP_LPJ_G0007532.1 mouse_genomes_project X 8276509 8278152 - 2010308F09Rik lincRNA lincRNA MGP_LPJ_T0009379.1 MGP_LPJ_G0007532.1 mouse_genomes_project X 8276552 8291425 - 2010308F09Rik lincRNA lincRNA MGP_LPJ_T0016659.1 MGP_LPJ_G0014750.1 mouse_genomes_project X 120178239 120178575 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097593.1 MGP_LPJ_G0036104.1 mouse_genomes_project X 153580654 153586195 + MGP_LPJ_P0097593 Samt2 protein_coding protein_coding MGP_LPJ_T0097591.1 MGP_LPJ_G0036102.1 mouse_genomes_project X 153326206 153336781 + MGP_LPJ_P0097591 protein_coding protein_coding MGP_LPJ_T0096478.1 MGP_LPJ_G0035776.1 mouse_genomes_project X 75977493 76236773 - MGP_LPJ_P0096478 Gm7173 protein_coding protein_coding MGP_LPJ_T0096479.1 MGP_LPJ_G0035776.1 mouse_genomes_project X 75977506 76236773 - MGP_LPJ_P0096479 Gm7173 protein_coding unknown_likely_coding MGP_LPJ_T0096480.1 MGP_LPJ_G0035776.1 mouse_genomes_project X 76042935 76069992 - MGP_LPJ_P0096480 Gm7173 protein_coding protein_coding MGP_LPJ_T0096481.1 MGP_LPJ_G0035776.1 mouse_genomes_project X 76115001 76147503 - MGP_LPJ_P0096481 Gm7173 protein_coding protein_coding MGP_LPJ_T0096482.1 MGP_LPJ_G0035776.1 mouse_genomes_project X 76201356 76236773 - MGP_LPJ_P0096482 Gm7173 protein_coding protein_coding MGP_LPJ_T0009462.1 MGP_LPJ_G0007586.1 mouse_genomes_project X 166417900 166425028 + Gm15228 lincRNA lincRNA MGP_LPJ_T0096870.1 MGP_LPJ_G0035895.1 mouse_genomes_project X 103234544 103235889 + MGP_LPJ_P0096870 Cypt2 protein_coding protein_coding MGP_LPJ_T0016751.1 MGP_LPJ_G0014842.1 mouse_genomes_project X 141105903 141106314 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016818.1 MGP_LPJ_G0014909.1 mouse_genomes_project X 156425578 156426624 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011161.1 MGP_LPJ_G0009279.1 mouse_genomes_project X 48283695 48283760 - Mir106a miRNA miRNA MGP_LPJ_T0096735.1 MGP_LPJ_G0035851.1 mouse_genomes_project X 98723464 98731071 - MGP_LPJ_P0096735 Gm20489 protein_coding protein_coding MGP_LPJ_T0016552.1 MGP_LPJ_G0014643.1 mouse_genomes_project X 101174580 101175358 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096716.1 MGP_LPJ_G0035846.1 mouse_genomes_project X 98288292 98506209 - MGP_LPJ_P0096716 Tex11 protein_coding protein_coding MGP_LPJ_T0096717.1 MGP_LPJ_G0035846.1 mouse_genomes_project X 98288292 98506237 - MGP_LPJ_P0096717 Tex11 protein_coding protein_coding MGP_LPJ_T0096718.1 MGP_LPJ_G0035846.1 mouse_genomes_project X 98321265 98506237 - MGP_LPJ_P0096718 Tex11 protein_coding protein_coding MGP_LPJ_T0096798.1 MGP_LPJ_G0035862.1 mouse_genomes_project X 99209454 99212202 - MGP_LPJ_P0096798 Cxcr3 protein_coding protein_coding MGP_LPJ_T0095507.1 MGP_LPJ_G0035492.1 mouse_genomes_project X 16089595 16106809 - MGP_LPJ_P0095507 Elk1 protein_coding protein_coding MGP_LPJ_T0095508.1 MGP_LPJ_G0035492.1 mouse_genomes_project X 16095921 16106809 - Elk1 protein_coding retained_intron MGP_LPJ_T0011144.1 MGP_LPJ_G0009262.1 mouse_genomes_project X 15973328 15973406 - Gm24824 miRNA miRNA MGP_LPJ_T0016138.1 MGP_LPJ_G0014229.1 mouse_genomes_project X 2122502 2122916 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016851.1 MGP_LPJ_G0014942.1 mouse_genomes_project X 162048122 162048808 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096066.1 MGP_LPJ_G0035692.1 mouse_genomes_project X 69677936 69684247 + MGP_LPJ_P0096066 protein_coding protein_coding MGP_LPJ_T0016478.1 MGP_LPJ_G0014569.1 mouse_genomes_project X 89739971 89741531 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097153.1 MGP_LPJ_G0035982.1 mouse_genomes_project X 133514305 133734401 + MGP_LPJ_P0097153 protein_coding protein_coding MGP_LPJ_T0097154.1 MGP_LPJ_G0035982.1 mouse_genomes_project X 133514305 133734231 + MGP_LPJ_P0097154 protein_coding protein_coding MGP_LPJ_T0016752.1 MGP_LPJ_G0014843.1 mouse_genomes_project X 141261038 141261501 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096784.1 MGP_LPJ_G0035859.1 mouse_genomes_project X 99005446 99076271 + MGP_LPJ_P0096784 Taf1 protein_coding protein_coding MGP_LPJ_T0096785.1 MGP_LPJ_G0035859.1 mouse_genomes_project X 99005453 99077024 + MGP_LPJ_P0096785 Taf1 protein_coding protein_coding MGP_LPJ_T0096786.1 MGP_LPJ_G0035859.1 mouse_genomes_project X 99005471 99076271 + MGP_LPJ_P0096786 Taf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0096787.1 MGP_LPJ_G0035859.1 mouse_genomes_project X 99005471 99022629 + MGP_LPJ_P0096787 Taf1 protein_coding protein_coding MGP_LPJ_T0096788.1 MGP_LPJ_G0035859.1 mouse_genomes_project X 99029739 99076271 + Taf1 protein_coding retained_intron MGP_LPJ_T0096789.1 MGP_LPJ_G0035859.1 mouse_genomes_project X 99065783 99075808 + Taf1 protein_coding processed_transcript MGP_LPJ_T0095243.1 MGP_LPJ_G0035412.1 mouse_genomes_project X 2463230 2479089 + MGP_LPJ_P0095243 Kcnd1 protein_coding protein_coding MGP_LPJ_T0095244.1 MGP_LPJ_G0035412.1 mouse_genomes_project X 2463248 2464209 + Kcnd1 protein_coding processed_transcript MGP_LPJ_T0095414.1 MGP_LPJ_G0035464.1 mouse_genomes_project X 8553148 8847054 - MGP_LPJ_P0095414 Cask protein_coding unknown_likely_coding MGP_LPJ_T0095415.1 MGP_LPJ_G0035464.1 mouse_genomes_project X 8553152 8836962 - MGP_LPJ_P0095415 Cask protein_coding protein_coding MGP_LPJ_T0095416.1 MGP_LPJ_G0035464.1 mouse_genomes_project X 8553152 8900673 - MGP_LPJ_P0095416 Cask protein_coding protein_coding MGP_LPJ_T0095417.1 MGP_LPJ_G0035464.1 mouse_genomes_project X 8553152 8900710 - MGP_LPJ_P0095417 Cask protein_coding protein_coding MGP_LPJ_T0095418.1 MGP_LPJ_G0035464.1 mouse_genomes_project X 8557412 8900688 - MGP_LPJ_P0095418 Cask protein_coding protein_coding MGP_LPJ_T0095419.1 MGP_LPJ_G0035464.1 mouse_genomes_project X 8557863 8562850 - MGP_LPJ_P0095419 Cask protein_coding protein_coding MGP_LPJ_T0095420.1 MGP_LPJ_G0035464.1 mouse_genomes_project X 8558161 8573755 - MGP_LPJ_P0095420 Cask protein_coding protein_coding MGP_LPJ_T0095421.1 MGP_LPJ_G0035464.1 mouse_genomes_project X 8569425 8595849 - MGP_LPJ_P0095421 Cask protein_coding protein_coding MGP_LPJ_T0095422.1 MGP_LPJ_G0035464.1 mouse_genomes_project X 8590471 8900710 - Cask protein_coding retained_intron MGP_LPJ_T0095423.1 MGP_LPJ_G0035464.1 mouse_genomes_project X 8609783 8715588 - MGP_LPJ_P0095423 Cask protein_coding protein_coding MGP_LPJ_T0095424.1 MGP_LPJ_G0035464.1 mouse_genomes_project X 8665125 8900220 - MGP_LPJ_P0095424 Cask protein_coding protein_coding MGP_LPJ_T0095428.1 MGP_LPJ_G0035464.1 mouse_genomes_project X 8753526 8905499 - Cask protein_coding processed_transcript MGP_LPJ_T0095429.1 MGP_LPJ_G0035464.1 mouse_genomes_project X 8900221 8900867 - Cask protein_coding processed_transcript MGP_LPJ_T0097552.1 MGP_LPJ_G0036086.1 mouse_genomes_project X 151206910 151212370 - Tspyl2 protein_coding retained_intron MGP_LPJ_T0097553.1 MGP_LPJ_G0036086.1 mouse_genomes_project X 151206910 151212370 - Tspyl2 protein_coding retained_intron MGP_LPJ_T0097554.1 MGP_LPJ_G0036086.1 mouse_genomes_project X 151206913 151212370 - MGP_LPJ_P0097554 Tspyl2 protein_coding protein_coding MGP_LPJ_T0097555.1 MGP_LPJ_G0036086.1 mouse_genomes_project X 151209359 151211903 - MGP_LPJ_P0097555 Tspyl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0097556.1 MGP_LPJ_G0036086.1 mouse_genomes_project X 151210323 151211860 - Tspyl2 protein_coding retained_intron MGP_LPJ_T0096851.1 MGP_LPJ_G0035885.1 mouse_genomes_project X 101314802 101315887 + MGP_LPJ_P0096851 Zcchc13 protein_coding protein_coding MGP_LPJ_T0005599.1 MGP_LPJ_G0004719.1 mouse_genomes_project X 2813282 2815832 + Rbm3os antisense antisense MGP_LPJ_T0005600.1 MGP_LPJ_G0004719.1 mouse_genomes_project X 2813784 2815544 + Rbm3os antisense antisense MGP_LPJ_T0095491.1 MGP_LPJ_G0035488.1 mouse_genomes_project X 15946931 16011685 + MGP_LPJ_P0095491 Araf protein_coding nonsense_mediated_decay MGP_LPJ_T0095492.1 MGP_LPJ_G0035488.1 mouse_genomes_project X 15999936 16011707 + MGP_LPJ_P0095492 Araf protein_coding protein_coding MGP_LPJ_T0095493.1 MGP_LPJ_G0035488.1 mouse_genomes_project X 15999957 16006702 + Araf protein_coding retained_intron MGP_LPJ_T0095494.1 MGP_LPJ_G0035488.1 mouse_genomes_project X 15999959 16004100 + MGP_LPJ_P0095494 Araf protein_coding protein_coding MGP_LPJ_T0095495.1 MGP_LPJ_G0035488.1 mouse_genomes_project X 15999968 16005756 + Araf protein_coding processed_transcript MGP_LPJ_T0095496.1 MGP_LPJ_G0035488.1 mouse_genomes_project X 15999971 16004085 + MGP_LPJ_P0095496 Araf protein_coding protein_coding MGP_LPJ_T0095497.1 MGP_LPJ_G0035488.1 mouse_genomes_project X 15999975 16002913 + Araf protein_coding retained_intron MGP_LPJ_T0095498.1 MGP_LPJ_G0035488.1 mouse_genomes_project X 15999982 16004646 + MGP_LPJ_P0095498 Araf protein_coding protein_coding MGP_LPJ_T0095499.1 MGP_LPJ_G0035488.1 mouse_genomes_project X 16002325 16003410 + Araf protein_coding retained_intron MGP_LPJ_T0095500.1 MGP_LPJ_G0035488.1 mouse_genomes_project X 16004613 16011301 + MGP_LPJ_P0095500 Araf protein_coding unknown_likely_coding MGP_LPJ_T0095501.1 MGP_LPJ_G0035488.1 mouse_genomes_project X 16008910 16011396 + MGP_LPJ_P0095501 Araf protein_coding protein_coding MGP_LPJ_T0096529.1 MGP_LPJ_G0035795.1 mouse_genomes_project X 89047226 89048261 - MGP_LPJ_P0096529 Gm8914 protein_coding protein_coding MGP_LPJ_T0016698.1 MGP_LPJ_G0014789.1 mouse_genomes_project X 133862096 133862839 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097634.1 MGP_LPJ_G0036117.1 mouse_genomes_project X 156870525 157107115 - MGP_LPJ_P0097634 Cnksr2 protein_coding protein_coding MGP_LPJ_T0097635.1 MGP_LPJ_G0036117.1 mouse_genomes_project X 156881832 157107115 - MGP_LPJ_P0097635 Cnksr2 protein_coding protein_coding MGP_LPJ_T0097636.1 MGP_LPJ_G0036117.1 mouse_genomes_project X 156908278 156917491 - Cnksr2 protein_coding retained_intron MGP_LPJ_T0016409.1 MGP_LPJ_G0014500.1 mouse_genomes_project X 75131026 75136685 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016281.1 MGP_LPJ_G0014372.1 mouse_genomes_project X 46538240 46539097 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016551.1 MGP_LPJ_G0014642.1 mouse_genomes_project X 101156723 101157124 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016585.1 MGP_LPJ_G0014676.1 mouse_genomes_project X 105125873 105126900 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095700.1 MGP_LPJ_G0035564.1 mouse_genomes_project X 37530991 37661703 + MGP_LPJ_P0095700 Stag2 protein_coding protein_coding MGP_LPJ_T0095701.1 MGP_LPJ_G0035564.1 mouse_genomes_project X 37531089 37661693 + MGP_LPJ_P0095701 Stag2 protein_coding protein_coding MGP_LPJ_T0095702.1 MGP_LPJ_G0035564.1 mouse_genomes_project X 37531218 37596371 + Stag2 protein_coding retained_intron MGP_LPJ_T0095703.1 MGP_LPJ_G0035564.1 mouse_genomes_project X 37531360 37589958 + MGP_LPJ_P0095703 Stag2 protein_coding protein_coding MGP_LPJ_T0095704.1 MGP_LPJ_G0035564.1 mouse_genomes_project X 37531831 37595110 + Stag2 protein_coding processed_transcript MGP_LPJ_T0095705.1 MGP_LPJ_G0035564.1 mouse_genomes_project X 37533923 37661703 + MGP_LPJ_P0095705 Stag2 protein_coding protein_coding MGP_LPJ_T0095706.1 MGP_LPJ_G0035564.1 mouse_genomes_project X 37534236 37589961 + MGP_LPJ_P0095706 Stag2 protein_coding protein_coding MGP_LPJ_T0095707.1 MGP_LPJ_G0035564.1 mouse_genomes_project X 37535402 37604720 + MGP_LPJ_P0095707 Stag2 protein_coding protein_coding MGP_LPJ_T0096971.1 MGP_LPJ_G0035923.1 mouse_genomes_project X 108592594 108595522 + MGP_LPJ_P0096971 Pou3f4 protein_coding protein_coding MGP_LPJ_T0011775.1 MGP_LPJ_G0009893.1 mouse_genomes_project X 84847584 84847868 - Gm24812 misc_RNA misc_RNA MGP_LPJ_T0005606.1 MGP_LPJ_G0004725.1 mouse_genomes_project X 47826806 47865297 + Gm14582 antisense antisense MGP_LPJ_T0096640.1 MGP_LPJ_G0035828.1 mouse_genomes_project X 95945499 96289728 - MGP_LPJ_P0096640 Ophn1 protein_coding protein_coding MGP_LPJ_T0096641.1 MGP_LPJ_G0035828.1 mouse_genomes_project X 95953748 96289524 - MGP_LPJ_P0096641 Ophn1 protein_coding protein_coding MGP_LPJ_T0096642.1 MGP_LPJ_G0035828.1 mouse_genomes_project X 95953754 95973973 - MGP_LPJ_P0096642 Ophn1 protein_coding protein_coding MGP_LPJ_T0096643.1 MGP_LPJ_G0035828.1 mouse_genomes_project X 95959066 95973919 - Ophn1 protein_coding processed_transcript MGP_LPJ_T0096644.1 MGP_LPJ_G0035828.1 mouse_genomes_project X 96108383 96289768 - Ophn1 protein_coding retained_intron MGP_LPJ_T0096645.1 MGP_LPJ_G0035828.1 mouse_genomes_project X 96108611 96289728 - Ophn1 protein_coding retained_intron MGP_LPJ_T0096646.1 MGP_LPJ_G0035828.1 mouse_genomes_project X 96132276 96289728 - MGP_LPJ_P0096646 Ophn1 protein_coding protein_coding MGP_LPJ_T0096647.1 MGP_LPJ_G0035828.1 mouse_genomes_project X 96197871 96289352 - Ophn1 protein_coding retained_intron MGP_LPJ_T0096648.1 MGP_LPJ_G0035828.1 mouse_genomes_project X 96272222 96289127 - Ophn1 protein_coding processed_transcript MGP_LPJ_T0096649.1 MGP_LPJ_G0035828.1 mouse_genomes_project X 96286524 96289368 - Ophn1 protein_coding retained_intron MGP_LPJ_T0011149.1 MGP_LPJ_G0009267.1 mouse_genomes_project X 34111321 34111387 - Gm25642 miRNA miRNA MGP_LPJ_T0016634.1 MGP_LPJ_G0014725.1 mouse_genomes_project X 115422389 115424380 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101435.1 MGP_LPJ_G0039601.1 mouse_genomes_project X 33003525 33003976 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0011177.1 MGP_LPJ_G0009295.1 mouse_genomes_project X 63142338 63142414 - Mir883a miRNA miRNA MGP_LPJ_T0095502.1 MGP_LPJ_G0035489.1 mouse_genomes_project X 16011696 16077197 - MGP_LPJ_P0095502 Syn1 protein_coding protein_coding MGP_LPJ_T0011769.1 MGP_LPJ_G0009887.1 mouse_genomes_project X 45548444 45548739 + Gm23385 misc_RNA misc_RNA MGP_LPJ_T0009393.1 MGP_LPJ_G0007543.1 mouse_genomes_project X 48621136 48622558 - Gm28730 lincRNA lincRNA MGP_LPJ_T0009394.1 MGP_LPJ_G0007543.1 mouse_genomes_project X 48621144 48622542 - Gm28730 lincRNA lincRNA MGP_LPJ_T0009395.1 MGP_LPJ_G0007543.1 mouse_genomes_project X 48621249 48623102 - Gm28730 lincRNA lincRNA MGP_LPJ_T0016436.1 MGP_LPJ_G0014527.1 mouse_genomes_project X 82664461 82664829 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005616.1 MGP_LPJ_G0004733.1 mouse_genomes_project X 67931488 67963314 + Gm16189 antisense antisense MGP_LPJ_T0096427.1 MGP_LPJ_G0035752.1 mouse_genomes_project X 72062397 72099296 + MGP_LPJ_P0096427 Brcc3 protein_coding protein_coding MGP_LPJ_T0096428.1 MGP_LPJ_G0035752.1 mouse_genomes_project X 72062466 72097280 + MGP_LPJ_P0096428 Brcc3 protein_coding protein_coding MGP_LPJ_T0096429.1 MGP_LPJ_G0035752.1 mouse_genomes_project X 72062469 72096027 + Brcc3 protein_coding retained_intron MGP_LPJ_T0096430.1 MGP_LPJ_G0035752.1 mouse_genomes_project X 72062479 72097003 + MGP_LPJ_P0096430 Brcc3 protein_coding protein_coding MGP_LPJ_T0096431.1 MGP_LPJ_G0035752.1 mouse_genomes_project X 72062485 72083200 + MGP_LPJ_P0096431 Brcc3 protein_coding protein_coding MGP_LPJ_T0096432.1 MGP_LPJ_G0035752.1 mouse_genomes_project X 72063076 72080702 + MGP_LPJ_P0096432 Brcc3 protein_coding protein_coding MGP_LPJ_T0096433.1 MGP_LPJ_G0035752.1 mouse_genomes_project X 72079202 72096519 + Brcc3 protein_coding retained_intron MGP_LPJ_T0097066.1 MGP_LPJ_G0035960.1 mouse_genomes_project X 132086191 132113030 + MGP_LPJ_P0097066 Cstf2 protein_coding protein_coding MGP_LPJ_T0097067.1 MGP_LPJ_G0035960.1 mouse_genomes_project X 132086201 132113803 + MGP_LPJ_P0097067 Cstf2 protein_coding protein_coding MGP_LPJ_T0097068.1 MGP_LPJ_G0035960.1 mouse_genomes_project X 132086219 132102838 + MGP_LPJ_P0097068 Cstf2 protein_coding protein_coding MGP_LPJ_T0097069.1 MGP_LPJ_G0035960.1 mouse_genomes_project X 132086315 132088491 + Cstf2 protein_coding processed_transcript MGP_LPJ_T0097070.1 MGP_LPJ_G0035960.1 mouse_genomes_project X 132086338 132113803 + Cstf2 protein_coding retained_intron MGP_LPJ_T0097071.1 MGP_LPJ_G0035960.1 mouse_genomes_project X 132086338 132089628 + MGP_LPJ_P0097071 Cstf2 protein_coding protein_coding MGP_LPJ_T0097072.1 MGP_LPJ_G0035960.1 mouse_genomes_project X 132089391 132101248 + MGP_LPJ_P0097072 Cstf2 protein_coding protein_coding MGP_LPJ_T0097073.1 MGP_LPJ_G0035960.1 mouse_genomes_project X 132093255 132101285 + MGP_LPJ_P0097073 Cstf2 protein_coding protein_coding MGP_LPJ_T0011159.1 MGP_LPJ_G0009277.1 mouse_genomes_project X 48283305 48283385 - Mir20b miRNA miRNA MGP_LPJ_T0009440.1 MGP_LPJ_G0007573.1 mouse_genomes_project X 142635502 142648087 + lincRNA lincRNA MGP_LPJ_T0096446.1 MGP_LPJ_G0035758.1 mouse_genomes_project X 72986694 72993913 + MGP_LPJ_P0096446 Cldn34b3 protein_coding protein_coding MGP_LPJ_T0016274.1 MGP_LPJ_G0014365.1 mouse_genomes_project X 44422333 44422630 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016200.1 MGP_LPJ_G0014291.1 mouse_genomes_project X 15449387 15449793 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096330.1 MGP_LPJ_G0035731.1 mouse_genomes_project X 70929949 70932266 - MGP_LPJ_P0096330 Lage3 protein_coding protein_coding MGP_LPJ_T0096331.1 MGP_LPJ_G0035731.1 mouse_genomes_project X 70930834 70932290 - MGP_LPJ_P0096331 Lage3 protein_coding protein_coding MGP_LPJ_T0096332.1 MGP_LPJ_G0035731.1 mouse_genomes_project X 70930835 70932247 - MGP_LPJ_P0096332 Lage3 protein_coding protein_coding MGP_LPJ_T0097592.1 MGP_LPJ_G0036103.1 mouse_genomes_project X 153424088 153426769 + MGP_LPJ_P0097592 Samt4 protein_coding protein_coding MGP_LPJ_T0097061.1 MGP_LPJ_G0035958.1 mouse_genomes_project X 131931334 131954071 + MGP_LPJ_P0097061 Srpx2 protein_coding protein_coding MGP_LPJ_T0016466.1 MGP_LPJ_G0014557.1 mouse_genomes_project X 88267381 88270258 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016358.1 MGP_LPJ_G0014449.1 mouse_genomes_project X 64897091 64898097 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016778.1 MGP_LPJ_G0014869.1 mouse_genomes_project X 145162202 145163138 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099939.1 MGP_LPJ_G0038202.1 mouse_genomes_project X 150203081 150203231 + Gm22248 snRNA snRNA MGP_LPJ_T0016706.1 MGP_LPJ_G0014797.1 mouse_genomes_project X 135079151 135079558 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011774.1 MGP_LPJ_G0009892.1 mouse_genomes_project X 79693262 79693365 - Gm23671 misc_RNA misc_RNA MGP_LPJ_T0101201.1 MGP_LPJ_G0039464.1 mouse_genomes_project X 156344201 156344333 - Gm25795 snoRNA snoRNA MGP_LPJ_T0009398.1 MGP_LPJ_G0007545.1 mouse_genomes_project X 57011072 57054580 + Gm14664 lincRNA lincRNA MGP_LPJ_T0016280.1 MGP_LPJ_G0014371.1 mouse_genomes_project X 46015187 46015570 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095948.1 MGP_LPJ_G0035646.1 mouse_genomes_project X 56392033 56497188 - MGP_LPJ_P0095948 Gm7073 protein_coding protein_coding MGP_LPJ_T0095860.1 MGP_LPJ_G0035617.1 mouse_genomes_project X 49283701 49284686 - MGP_LPJ_P0095860 protein_coding protein_coding MGP_LPJ_T0009441.1 MGP_LPJ_G0007574.1 mouse_genomes_project X 148917061 148932181 - lincRNA lincRNA MGP_LPJ_T0009442.1 MGP_LPJ_G0007574.1 mouse_genomes_project X 148917411 148917825 - lincRNA lincRNA MGP_LPJ_T0096073.1 MGP_LPJ_G0035697.1 mouse_genomes_project X 69988792 69990432 - MGP_LPJ_P0096073 Trex2 protein_coding protein_coding MGP_LPJ_T0016789.1 MGP_LPJ_G0014880.1 mouse_genomes_project X 150317429 150317585 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016608.1 MGP_LPJ_G0014699.1 mouse_genomes_project X 110431902 110432377 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096749.1 MGP_LPJ_G0035854.1 mouse_genomes_project X 98761153 98782455 + MGP_LPJ_P0096749 Nlgn3 protein_coding protein_coding MGP_LPJ_T0096750.1 MGP_LPJ_G0035854.1 mouse_genomes_project X 98761167 98780868 + MGP_LPJ_P0096750 Nlgn3 protein_coding protein_coding MGP_LPJ_T0096751.1 MGP_LPJ_G0035854.1 mouse_genomes_project X 98761186 98788142 + MGP_LPJ_P0096751 Nlgn3 protein_coding protein_coding MGP_LPJ_T0096752.1 MGP_LPJ_G0035854.1 mouse_genomes_project X 98762656 98764257 + Nlgn3 protein_coding processed_transcript MGP_LPJ_T0096753.1 MGP_LPJ_G0035854.1 mouse_genomes_project X 98776579 98780344 + Nlgn3 protein_coding processed_transcript MGP_LPJ_T0016199.1 MGP_LPJ_G0014290.1 mouse_genomes_project X 15023880 15024343 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096682.1 MGP_LPJ_G0035837.1 mouse_genomes_project X 97932734 97954398 + MGP_LPJ_P0096682 Igbp1 protein_coding protein_coding MGP_LPJ_T0096683.1 MGP_LPJ_G0035837.1 mouse_genomes_project X 97932798 97937841 + Igbp1 protein_coding retained_intron MGP_LPJ_T0095958.1 MGP_LPJ_G0035654.1 mouse_genomes_project X 60471900 60486756 - MGP_LPJ_P0095958 Slitrk4 protein_coding protein_coding MGP_LPJ_T0095959.1 MGP_LPJ_G0035654.1 mouse_genomes_project X 60479534 60486739 - MGP_LPJ_P0095959 Slitrk4 protein_coding protein_coding MGP_LPJ_T0095960.1 MGP_LPJ_G0035654.1 mouse_genomes_project X 60482485 60485582 - MGP_LPJ_P0095960 Slitrk4 protein_coding protein_coding MGP_LPJ_T0095563.1 MGP_LPJ_G0035512.1 mouse_genomes_project X 31872891 31880765 + MGP_LPJ_P0095563 Pgrmc1 protein_coding protein_coding MGP_LPJ_T0101177.1 MGP_LPJ_G0039440.1 mouse_genomes_project X 102327710 102327817 + Gm22430 snoRNA snoRNA MGP_LPJ_T0016800.1 MGP_LPJ_G0014891.1 mouse_genomes_project X 152405197 152405582 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096561.1 MGP_LPJ_G0035807.1 mouse_genomes_project X 91437612 91441171 + Klhl15 protein_coding processed_transcript MGP_LPJ_T0096562.1 MGP_LPJ_G0035807.1 mouse_genomes_project X 91437617 91461449 + MGP_LPJ_P0096562 Klhl15 protein_coding protein_coding MGP_LPJ_T0096563.1 MGP_LPJ_G0035807.1 mouse_genomes_project X 91437940 91462772 + MGP_LPJ_P0096563 Klhl15 protein_coding protein_coding MGP_LPJ_T0096564.1 MGP_LPJ_G0035807.1 mouse_genomes_project X 91437943 91482988 + MGP_LPJ_P0096564 Klhl15 protein_coding protein_coding MGP_LPJ_T0096565.1 MGP_LPJ_G0035807.1 mouse_genomes_project X 91438000 91464677 + MGP_LPJ_P0096565 Klhl15 protein_coding protein_coding MGP_LPJ_T0096566.1 MGP_LPJ_G0035807.1 mouse_genomes_project X 91438003 91482217 + Klhl15 protein_coding retained_intron MGP_LPJ_T0096567.1 MGP_LPJ_G0035807.1 mouse_genomes_project X 91438003 91462776 + MGP_LPJ_P0096567 Klhl15 protein_coding protein_coding MGP_LPJ_T0096568.1 MGP_LPJ_G0035807.1 mouse_genomes_project X 91438324 91482982 + MGP_LPJ_P0096568 Klhl15 protein_coding protein_coding MGP_LPJ_T0096569.1 MGP_LPJ_G0035807.1 mouse_genomes_project X 91438824 91488107 + MGP_LPJ_P0096569 Klhl15 protein_coding protein_coding MGP_LPJ_T0016618.1 MGP_LPJ_G0014709.1 mouse_genomes_project X 112400665 112401104 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016674.1 MGP_LPJ_G0014765.1 mouse_genomes_project X 128455017 128455805 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102492.1 MGP_LPJ_G0040528.1 mouse_genomes_project X 66821552 66822392 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0096012.1 MGP_LPJ_G0035672.1 mouse_genomes_project X 67853568 67910982 + MGP_LPJ_P0096012 Mtmr1 protein_coding protein_coding MGP_LPJ_T0096013.1 MGP_LPJ_G0035672.1 mouse_genomes_project X 67853568 67879354 + MGP_LPJ_P0096013 Mtmr1 protein_coding protein_coding MGP_LPJ_T0096014.1 MGP_LPJ_G0035672.1 mouse_genomes_project X 67853745 67884819 + MGP_LPJ_P0096014 Mtmr1 protein_coding protein_coding MGP_LPJ_T0096015.1 MGP_LPJ_G0035672.1 mouse_genomes_project X 67858624 67879332 + MGP_LPJ_P0096015 Mtmr1 protein_coding protein_coding MGP_LPJ_T0096016.1 MGP_LPJ_G0035672.1 mouse_genomes_project X 67858624 67879332 + MGP_LPJ_P0096016 Mtmr1 protein_coding protein_coding MGP_LPJ_T0096017.1 MGP_LPJ_G0035672.1 mouse_genomes_project X 67858624 67879332 + MGP_LPJ_P0096017 Mtmr1 protein_coding protein_coding MGP_LPJ_T0096018.1 MGP_LPJ_G0035672.1 mouse_genomes_project X 67881774 67883144 + Mtmr1 protein_coding retained_intron MGP_LPJ_T0096019.1 MGP_LPJ_G0035672.1 mouse_genomes_project X 67882275 67883450 + Mtmr1 protein_coding retained_intron MGP_LPJ_T0096020.1 MGP_LPJ_G0035672.1 mouse_genomes_project X 67884512 67910449 + Mtmr1 protein_coding retained_intron MGP_LPJ_T0016318.1 MGP_LPJ_G0014409.1 mouse_genomes_project X 56663225 56664019 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016215.1 MGP_LPJ_G0014306.1 mouse_genomes_project X 18574663 18575113 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096437.1 MGP_LPJ_G0035754.1 mouse_genomes_project X 72233782 72239973 - MGP_LPJ_P0096437 Rab39b protein_coding protein_coding MGP_LPJ_T0016403.1 MGP_LPJ_G0014494.1 mouse_genomes_project X 74382568 74383168 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095624.1 MGP_LPJ_G0035541.1 mouse_genomes_project X 33048762 33054786 - MGP_LPJ_P0095624 Rhox2f protein_coding protein_coding MGP_LPJ_T0095625.1 MGP_LPJ_G0035541.1 mouse_genomes_project X 33048765 33054362 - MGP_LPJ_P0095625 Rhox2f protein_coding protein_coding MGP_LPJ_T0016654.1 MGP_LPJ_G0014745.1 mouse_genomes_project X 119641293 119644201 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099947.1 MGP_LPJ_G0038210.1 mouse_genomes_project X 162360708 162360815 - Gm22746 snRNA snRNA MGP_LPJ_T0095148.1 MGP_LPJ_G0035395.1 mouse_genomes_project X 1753234 1921064 - MGP_LPJ_P0095148 Clcn5 protein_coding protein_coding MGP_LPJ_T0095149.1 MGP_LPJ_G0035395.1 mouse_genomes_project X 1753494 1811492 - MGP_LPJ_P0095149 Clcn5 protein_coding protein_coding MGP_LPJ_T0095150.1 MGP_LPJ_G0035395.1 mouse_genomes_project X 1753942 1785576 - Clcn5 protein_coding retained_intron MGP_LPJ_T0095151.1 MGP_LPJ_G0035395.1 mouse_genomes_project X 1764963 1921189 - MGP_LPJ_P0095151 Clcn5 protein_coding protein_coding MGP_LPJ_T0095152.1 MGP_LPJ_G0035395.1 mouse_genomes_project X 1811477 1921001 - Clcn5 protein_coding processed_transcript MGP_LPJ_T0095772.1 MGP_LPJ_G0035584.1 mouse_genomes_project X 44059229 44109876 - MGP_LPJ_P0095772 Zfp280c protein_coding protein_coding MGP_LPJ_T0095773.1 MGP_LPJ_G0035584.1 mouse_genomes_project X 44059229 44112167 - MGP_LPJ_P0095773 Zfp280c protein_coding protein_coding MGP_LPJ_T0095774.1 MGP_LPJ_G0035584.1 mouse_genomes_project X 44059230 44112088 - MGP_LPJ_P0095774 Zfp280c protein_coding protein_coding MGP_LPJ_T0095775.1 MGP_LPJ_G0035584.1 mouse_genomes_project X 44059231 44109504 - MGP_LPJ_P0095775 Zfp280c protein_coding protein_coding MGP_LPJ_T0095776.1 MGP_LPJ_G0035584.1 mouse_genomes_project X 44060362 44061309 - Zfp280c protein_coding retained_intron MGP_LPJ_T0095777.1 MGP_LPJ_G0035584.1 mouse_genomes_project X 44096165 44112106 - Zfp280c protein_coding processed_transcript MGP_LPJ_T0095778.1 MGP_LPJ_G0035584.1 mouse_genomes_project X 44103837 44112219 - Zfp280c protein_coding processed_transcript MGP_LPJ_T0096817.1 MGP_LPJ_G0035870.1 mouse_genomes_project X 99752142 99756943 - MGP_LPJ_P0096817 Cited1 protein_coding protein_coding MGP_LPJ_T0096818.1 MGP_LPJ_G0035870.1 mouse_genomes_project X 99752165 99756614 - MGP_LPJ_P0096818 Cited1 protein_coding protein_coding MGP_LPJ_T0096819.1 MGP_LPJ_G0035870.1 mouse_genomes_project X 99752475 99755708 - MGP_LPJ_P0096819 Cited1 protein_coding protein_coding MGP_LPJ_T0096820.1 MGP_LPJ_G0035870.1 mouse_genomes_project X 99752582 99755537 - MGP_LPJ_P0096820 Cited1 protein_coding protein_coding MGP_LPJ_T0096821.1 MGP_LPJ_G0035870.1 mouse_genomes_project X 99752647 99756680 - MGP_LPJ_P0096821 Cited1 protein_coding protein_coding MGP_LPJ_T0101451.1 MGP_LPJ_G0039612.1 mouse_genomes_project X 149025731 149031363 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101452.1 MGP_LPJ_G0039612.1 mouse_genomes_project X 149027707 149028677 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0096866.1 MGP_LPJ_G0035893.1 mouse_genomes_project X 102787314 102792745 + MGP_LPJ_P0096866 Pbdc1 protein_coding protein_coding MGP_LPJ_T0096867.1 MGP_LPJ_G0035893.1 mouse_genomes_project X 102787319 102824639 + MGP_LPJ_P0096867 Pbdc1 protein_coding protein_coding MGP_LPJ_T0096868.1 MGP_LPJ_G0035893.1 mouse_genomes_project X 102787333 102790719 + Pbdc1 protein_coding retained_intron MGP_LPJ_T0016231.1 MGP_LPJ_G0014322.1 mouse_genomes_project X 34486928 34487875 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099903.1 MGP_LPJ_G0038166.1 mouse_genomes_project X 71608973 71609080 - Gm25629 snRNA snRNA MGP_LPJ_T0009403.1 MGP_LPJ_G0007549.1 mouse_genomes_project X 69531026 69531548 + Gm14684 lincRNA lincRNA MGP_LPJ_T0096585.1 MGP_LPJ_G0035813.1 mouse_genomes_project X 92356587 92360672 - MGP_LPJ_P0096585 Spin4 protein_coding protein_coding MGP_LPJ_T0016155.1 MGP_LPJ_G0014246.1 mouse_genomes_project X 3802404 3803265 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016243.1 MGP_LPJ_G0014334.1 mouse_genomes_project X 36331094 36332205 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095564.1 MGP_LPJ_G0035513.1 mouse_genomes_project X 31882999 31921174 - MGP_LPJ_P0095564 Akap17b protein_coding protein_coding MGP_LPJ_T0095565.1 MGP_LPJ_G0035513.1 mouse_genomes_project X 31886564 31920875 - MGP_LPJ_P0095565 Akap17b protein_coding protein_coding MGP_LPJ_T0095725.1 MGP_LPJ_G0035572.1 mouse_genomes_project X 41748326 41749665 + MGP_LPJ_P0095725 Actrt1 protein_coding protein_coding MGP_LPJ_T0095192.1 MGP_LPJ_G0035405.1 mouse_genomes_project X 2286676 2295180 - Magix protein_coding processed_transcript MGP_LPJ_T0095193.1 MGP_LPJ_G0035405.1 mouse_genomes_project X 2288138 2295018 - MGP_LPJ_P0095193 Magix protein_coding protein_coding MGP_LPJ_T0016655.1 MGP_LPJ_G0014746.1 mouse_genomes_project X 119715281 119716399 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016682.1 MGP_LPJ_G0014773.1 mouse_genomes_project X 130904311 130905363 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016742.1 MGP_LPJ_G0014833.1 mouse_genomes_project X 140431175 140433322 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016236.1 MGP_LPJ_G0014327.1 mouse_genomes_project X 35172150 35172720 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099930.1 MGP_LPJ_G0038193.1 mouse_genomes_project X 126612943 126613051 + Gm24522 snRNA snRNA MGP_LPJ_T0016183.1 MGP_LPJ_G0014274.1 mouse_genomes_project X 10478983 10479295 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095351.1 MGP_LPJ_G0035446.1 mouse_genomes_project X 4170867 4176814 - MGP_LPJ_P0095351 Gm14862 protein_coding protein_coding MGP_LPJ_T0009438.1 MGP_LPJ_G0007571.1 mouse_genomes_project X 138669015 138765184 - Gm15046 lincRNA lincRNA MGP_LPJ_T0011160.1 MGP_LPJ_G0009278.1 mouse_genomes_project X 48283523 48283606 - Mir18b miRNA miRNA MGP_LPJ_T0016627.1 MGP_LPJ_G0014718.1 mouse_genomes_project X 113897252 113897587 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101206.1 MGP_LPJ_G0039469.1 mouse_genomes_project X 163510563 163510693 + Gm22023 snoRNA snoRNA MGP_LPJ_T0101443.1 MGP_LPJ_G0039606.1 mouse_genomes_project X 101447587 101448216 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101444.1 MGP_LPJ_G0039606.1 mouse_genomes_project X 101447691 101448087 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0016733.1 MGP_LPJ_G0014824.1 mouse_genomes_project X 139707608 139707970 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016615.1 MGP_LPJ_G0014706.1 mouse_genomes_project X 111690336 111692155 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016697.1 MGP_LPJ_G0014788.1 mouse_genomes_project X 133374809 133375555 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099909.1 MGP_LPJ_G0038172.1 mouse_genomes_project X 96211567 96211674 + Gm26000 snRNA snRNA MGP_LPJ_T0095938.1 MGP_LPJ_G0035643.1 mouse_genomes_project X 55945463 55976642 + MGP_LPJ_P0095938 F9 protein_coding protein_coding MGP_LPJ_T0095188.1 MGP_LPJ_G0035403.1 mouse_genomes_project X 2281441 2284841 - Plp2 protein_coding retained_intron MGP_LPJ_T0095189.1 MGP_LPJ_G0035403.1 mouse_genomes_project X 2281441 2284859 - MGP_LPJ_P0095189 Plp2 protein_coding protein_coding MGP_LPJ_T0095191.1 MGP_LPJ_G0035403.1 mouse_genomes_project X 2282798 2284782 - Plp2 protein_coding retained_intron MGP_LPJ_T0097348.1 MGP_LPJ_G0036053.1 mouse_genomes_project X 141168601 141326764 + MGP_LPJ_P0097348 Tmem164 protein_coding protein_coding MGP_LPJ_T0097349.1 MGP_LPJ_G0036053.1 mouse_genomes_project X 141169635 141256448 + Tmem164 protein_coding retained_intron MGP_LPJ_T0097350.1 MGP_LPJ_G0036053.1 mouse_genomes_project X 141256150 141331886 + MGP_LPJ_P0097350 Tmem164 protein_coding protein_coding MGP_LPJ_T0016746.1 MGP_LPJ_G0014837.1 mouse_genomes_project X 140663513 140663771 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016548.1 MGP_LPJ_G0014639.1 mouse_genomes_project X 100971655 100972110 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016736.1 MGP_LPJ_G0014827.1 mouse_genomes_project X 140032712 140033222 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096464.1 MGP_LPJ_G0035771.1 mouse_genomes_project X 74915475 74920988 + MGP_LPJ_P0096464 Gm14743 protein_coding protein_coding MGP_LPJ_T0095362.1 MGP_LPJ_G0035450.1 mouse_genomes_project X 4776558 4777111 + MGP_LPJ_P0095362 4930557A04Rik protein_coding protein_coding MGP_LPJ_T0016450.1 MGP_LPJ_G0014541.1 mouse_genomes_project X 85662166 85662424 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095233.1 MGP_LPJ_G0035411.1 mouse_genomes_project X 2428330 2461509 + MGP_LPJ_P0095233 Gripap1 protein_coding protein_coding MGP_LPJ_T0095234.1 MGP_LPJ_G0035411.1 mouse_genomes_project X 2428559 2453425 + MGP_LPJ_P0095234 Gripap1 protein_coding protein_coding MGP_LPJ_T0095235.1 MGP_LPJ_G0035411.1 mouse_genomes_project X 2428560 2461505 + MGP_LPJ_P0095235 Gripap1 protein_coding protein_coding MGP_LPJ_T0095236.1 MGP_LPJ_G0035411.1 mouse_genomes_project X 2428571 2433110 + Gripap1 protein_coding retained_intron MGP_LPJ_T0095237.1 MGP_LPJ_G0035411.1 mouse_genomes_project X 2428573 2461505 + MGP_LPJ_P0095237 Gripap1 protein_coding protein_coding MGP_LPJ_T0095238.1 MGP_LPJ_G0035411.1 mouse_genomes_project X 2428577 2453425 + MGP_LPJ_P0095238 Gripap1 protein_coding protein_coding MGP_LPJ_T0095239.1 MGP_LPJ_G0035411.1 mouse_genomes_project X 2428583 2460898 + Gripap1 protein_coding processed_transcript MGP_LPJ_T0095240.1 MGP_LPJ_G0035411.1 mouse_genomes_project X 2438105 2451801 + Gripap1 protein_coding retained_intron MGP_LPJ_T0095241.1 MGP_LPJ_G0035411.1 mouse_genomes_project X 2451214 2451763 + Gripap1 protein_coding processed_transcript MGP_LPJ_T0095242.1 MGP_LPJ_G0035411.1 mouse_genomes_project X 2459860 2461505 + Gripap1 protein_coding retained_intron MGP_LPJ_T0016515.1 MGP_LPJ_G0014606.1 mouse_genomes_project X 95901403 95901891 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005612.1 MGP_LPJ_G0004730.1 mouse_genomes_project X 56860073 56864485 + Gm14662 antisense antisense MGP_LPJ_T0011148.1 MGP_LPJ_G0009266.1 mouse_genomes_project X 33559577 33559657 + Mir3110 miRNA miRNA MGP_LPJ_T0016837.1 MGP_LPJ_G0014928.1 mouse_genomes_project X 158664802 158665365 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016526.1 MGP_LPJ_G0014617.1 mouse_genomes_project X 98508660 98511277 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016209.1 MGP_LPJ_G0014300.1 mouse_genomes_project X 16814630 16815011 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095386.1 MGP_LPJ_G0035457.1 mouse_genomes_project X 7021768 7065591 - MGP_LPJ_P0095386 Bcor protein_coding protein_coding MGP_LPJ_T0095387.1 MGP_LPJ_G0035457.1 mouse_genomes_project X 7021768 7065591 - MGP_LPJ_P0095387 Bcor protein_coding protein_coding MGP_LPJ_T0095388.1 MGP_LPJ_G0035457.1 mouse_genomes_project X 7021768 7065591 - MGP_LPJ_P0095388 Bcor protein_coding protein_coding MGP_LPJ_T0095389.1 MGP_LPJ_G0035457.1 mouse_genomes_project X 7021768 7065591 - MGP_LPJ_P0095389 Bcor protein_coding protein_coding MGP_LPJ_T0095390.1 MGP_LPJ_G0035457.1 mouse_genomes_project X 7021771 7152211 - MGP_LPJ_P0095390 Bcor protein_coding protein_coding MGP_LPJ_T0095391.1 MGP_LPJ_G0035457.1 mouse_genomes_project X 7044015 7117350 - MGP_LPJ_P0095391 Bcor protein_coding protein_coding MGP_LPJ_T0095392.1 MGP_LPJ_G0035457.1 mouse_genomes_project X 7044105 7117300 - MGP_LPJ_P0095392 Bcor protein_coding protein_coding MGP_LPJ_T0095803.1 MGP_LPJ_G0035593.1 mouse_genomes_project X 45318478 45324184 - MGP_LPJ_P0095803 protein_coding protein_coding MGP_LPJ_T0095804.1 MGP_LPJ_G0035593.1 mouse_genomes_project X 45318478 45333682 - MGP_LPJ_P0095804 protein_coding protein_coding MGP_LPJ_T0095805.1 MGP_LPJ_G0035593.1 mouse_genomes_project X 45318487 45327955 - MGP_LPJ_P0095805 protein_coding unknown_likely_coding MGP_LPJ_T0095806.1 MGP_LPJ_G0035593.1 mouse_genomes_project X 45322289 45331298 - MGP_LPJ_P0095806 protein_coding protein_coding MGP_LPJ_T0095807.1 MGP_LPJ_G0035593.1 mouse_genomes_project X 45328899 45333682 - MGP_LPJ_P0095807 protein_coding protein_coding MGP_LPJ_T0095808.1 MGP_LPJ_G0035593.1 mouse_genomes_project X 45330878 45333668 - protein_coding processed_transcript MGP_LPJ_T0096806.1 MGP_LPJ_G0035865.1 mouse_genomes_project X 99562862 99567515 - MGP_LPJ_P0096806 Rgag4 protein_coding protein_coding MGP_LPJ_T0096807.1 MGP_LPJ_G0035865.1 mouse_genomes_project X 99562862 99567623 - MGP_LPJ_P0096807 Rgag4 protein_coding protein_coding MGP_LPJ_T0096808.1 MGP_LPJ_G0035865.1 mouse_genomes_project X 99563052 99563919 - Rgag4 protein_coding processed_transcript MGP_LPJ_T0095503.1 MGP_LPJ_G0035490.1 mouse_genomes_project X 16021320 16025888 + MGP_LPJ_P0095503 Timp1 protein_coding protein_coding MGP_LPJ_T0095504.1 MGP_LPJ_G0035490.1 mouse_genomes_project X 16021375 16025890 + MGP_LPJ_P0095504 Timp1 protein_coding protein_coding MGP_LPJ_T0016223.1 MGP_LPJ_G0014314.1 mouse_genomes_project X 31569040 31569536 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016251.1 MGP_LPJ_G0014342.1 mouse_genomes_project X 37731907 37732075 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011236.1 MGP_LPJ_G0009354.1 mouse_genomes_project X 145569358 145569456 + Mir1298 miRNA miRNA MGP_LPJ_T0096985.1 MGP_LPJ_G0035927.1 mouse_genomes_project X 109194821 109299401 - MGP_LPJ_P0096985 Hdx protein_coding protein_coding MGP_LPJ_T0096528.1 MGP_LPJ_G0035794.1 mouse_genomes_project X 88717702 88721177 + MGP_LPJ_P0096528 Mageb5 protein_coding protein_coding MGP_LPJ_T0005604.1 MGP_LPJ_G0004723.1 mouse_genomes_project X 41691947 41748231 - 4930515L19Rik antisense antisense MGP_LPJ_T0016833.1 MGP_LPJ_G0014924.1 mouse_genomes_project X 158154760 158155502 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018592.1 MGP_LPJ_G0015701.1 mouse_genomes_project X 72369868 72372569 - processed_transcript processed_transcript MGP_LPJ_T0016776.1 MGP_LPJ_G0014867.1 mouse_genomes_project X 145099154 145100362 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016260.1 MGP_LPJ_G0014351.1 mouse_genomes_project X 39911554 39911894 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018621.1 MGP_LPJ_G0015707.1 mouse_genomes_project X 131921986 131924489 - 4930570D08Rik processed_transcript processed_transcript MGP_LPJ_T0016335.1 MGP_LPJ_G0014426.1 mouse_genomes_project X 58721247 58721728 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097559.1 MGP_LPJ_G0036088.1 mouse_genomes_project X 151430054 151430690 + MGP_LPJ_P0097559 Cldn34a protein_coding protein_coding MGP_LPJ_T0016194.1 MGP_LPJ_G0014285.1 mouse_genomes_project X 14084312 14084929 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095438.1 MGP_LPJ_G0035471.1 mouse_genomes_project X 12033155 12060242 - MGP_LPJ_P0095438 Ndp protein_coding protein_coding MGP_LPJ_T0011787.1 MGP_LPJ_G0009905.1 mouse_genomes_project X 127224131 127224409 - Gm22225 misc_RNA misc_RNA MGP_LPJ_T0095722.1 MGP_LPJ_G0035570.1 mouse_genomes_project X 40173195 40176823 - MGP_LPJ_P0095722 Dcaf12l1 protein_coding protein_coding MGP_LPJ_T0095723.1 MGP_LPJ_G0035570.1 mouse_genomes_project X 40173195 40176787 - MGP_LPJ_P0095723 Dcaf12l1 protein_coding protein_coding MGP_LPJ_T0095349.1 MGP_LPJ_G0035444.1 mouse_genomes_project X 3960461 3962242 + MGP_LPJ_P0095349 4930402K13Rik protein_coding protein_coding MGP_LPJ_T0016870.1 MGP_LPJ_G0014961.1 mouse_genomes_project X 166279693 166280228 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095425.1 MGP_LPJ_G0035465.1 mouse_genomes_project X 8670934 8679941 + MGP_LPJ_P0095425 Gpr34 protein_coding protein_coding MGP_LPJ_T0095426.1 MGP_LPJ_G0035465.1 mouse_genomes_project X 8671614 8679943 + MGP_LPJ_P0095426 Gpr34 protein_coding protein_coding MGP_LPJ_T0095337.1 MGP_LPJ_G0035433.1 mouse_genomes_project X 3124307 3127843 + MGP_LPJ_P0095337 protein_coding protein_coding MGP_LPJ_T0016536.1 MGP_LPJ_G0014627.1 mouse_genomes_project X 100168411 100169816 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096999.1 MGP_LPJ_G0035933.1 mouse_genomes_project X 110214864 110241500 + Zfp711 protein_coding retained_intron MGP_LPJ_T0097000.1 MGP_LPJ_G0035933.1 mouse_genomes_project X 110214864 110250564 + MGP_LPJ_P0097000 Zfp711 protein_coding protein_coding MGP_LPJ_T0097001.1 MGP_LPJ_G0035933.1 mouse_genomes_project X 110215922 110249058 + MGP_LPJ_P0097001 Zfp711 protein_coding unknown_likely_coding MGP_LPJ_T0097002.1 MGP_LPJ_G0035933.1 mouse_genomes_project X 110231560 110247412 + MGP_LPJ_P0097002 Zfp711 protein_coding protein_coding MGP_LPJ_T0016252.1 MGP_LPJ_G0014343.1 mouse_genomes_project X 38277157 38277548 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005611.1 MGP_LPJ_G0004729.1 mouse_genomes_project X 56516067 56770124 + antisense antisense MGP_LPJ_T0095877.1 MGP_LPJ_G0035627.1 mouse_genomes_project X 52472387 52484945 - MGP_LPJ_P0095877 Mmgt1 protein_coding protein_coding MGP_LPJ_T0097223.1 MGP_LPJ_G0036014.1 mouse_genomes_project X 135366719 135458203 - MGP_LPJ_P0097223 Slc25a53 protein_coding protein_coding MGP_LPJ_T0097224.1 MGP_LPJ_G0036014.1 mouse_genomes_project X 135366725 135458181 - MGP_LPJ_P0097224 Slc25a53 protein_coding protein_coding MGP_LPJ_T0097225.1 MGP_LPJ_G0036014.1 mouse_genomes_project X 135366725 135411887 - MGP_LPJ_P0097225 Slc25a53 protein_coding protein_coding MGP_LPJ_T0097226.1 MGP_LPJ_G0036014.1 mouse_genomes_project X 135369403 135411912 - MGP_LPJ_P0097226 Slc25a53 protein_coding protein_coding MGP_LPJ_T0097227.1 MGP_LPJ_G0036014.1 mouse_genomes_project X 135369545 135411944 - MGP_LPJ_P0097227 Slc25a53 protein_coding protein_coding MGP_LPJ_T0097231.1 MGP_LPJ_G0036014.1 mouse_genomes_project X 135420457 135449983 - Slc25a53 protein_coding retained_intron MGP_LPJ_T0097232.1 MGP_LPJ_G0036014.1 mouse_genomes_project X 135420494 135458205 - Slc25a53 protein_coding processed_transcript MGP_LPJ_T0097233.1 MGP_LPJ_G0036014.1 mouse_genomes_project X 135422221 135457935 - Slc25a53 protein_coding processed_transcript MGP_LPJ_T0097234.1 MGP_LPJ_G0036014.1 mouse_genomes_project X 135422222 135458175 - Slc25a53 protein_coding processed_transcript MGP_LPJ_T0097235.1 MGP_LPJ_G0036014.1 mouse_genomes_project X 135422990 135437841 - Slc25a53 protein_coding processed_transcript MGP_LPJ_T0097236.1 MGP_LPJ_G0036014.1 mouse_genomes_project X 135435354 135458202 - Slc25a53 protein_coding processed_transcript MGP_LPJ_T0097237.1 MGP_LPJ_G0036014.1 mouse_genomes_project X 135449905 135457927 - Slc25a53 protein_coding processed_transcript MGP_LPJ_T0097238.1 MGP_LPJ_G0036014.1 mouse_genomes_project X 135451697 135458205 - Slc25a53 protein_coding retained_intron MGP_LPJ_T0097239.1 MGP_LPJ_G0036014.1 mouse_genomes_project X 135452306 135457911 - Slc25a53 protein_coding processed_transcript MGP_LPJ_T0099902.1 MGP_LPJ_G0038165.1 mouse_genomes_project X 69164450 69164557 + Gm23461 snRNA snRNA MGP_LPJ_T0095991.1 MGP_LPJ_G0035667.1 mouse_genomes_project X 66821552 66822392 - MGP_LPJ_P0095991 4930567H17Rik protein_coding protein_coding MGP_LPJ_T0016549.1 MGP_LPJ_G0014640.1 mouse_genomes_project X 100989325 100989749 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097203.1 MGP_LPJ_G0036005.1 mouse_genomes_project X 134741335 134764971 - MGP_LPJ_P0097203 protein_coding protein_coding MGP_LPJ_T0097459.1 MGP_LPJ_G0036073.1 mouse_genomes_project X 149593374 149601345 - MGP_LPJ_P0097459 Maged2 protein_coding protein_coding MGP_LPJ_T0097460.1 MGP_LPJ_G0036073.1 mouse_genomes_project X 149593425 149599968 - Maged2 protein_coding retained_intron MGP_LPJ_T0097461.1 MGP_LPJ_G0036073.1 mouse_genomes_project X 149593425 149600707 - MGP_LPJ_P0097461 Maged2 protein_coding protein_coding MGP_LPJ_T0097462.1 MGP_LPJ_G0036073.1 mouse_genomes_project X 149593428 149601269 - MGP_LPJ_P0097462 Maged2 protein_coding protein_coding MGP_LPJ_T0097463.1 MGP_LPJ_G0036073.1 mouse_genomes_project X 149593721 149599715 - MGP_LPJ_P0097463 Maged2 protein_coding protein_coding MGP_LPJ_T0097464.1 MGP_LPJ_G0036073.1 mouse_genomes_project X 149597870 149600078 - MGP_LPJ_P0097464 Maged2 protein_coding protein_coding MGP_LPJ_T0097465.1 MGP_LPJ_G0036073.1 mouse_genomes_project X 149597887 149600154 - MGP_LPJ_P0097465 Maged2 protein_coding protein_coding MGP_LPJ_T0097466.1 MGP_LPJ_G0036073.1 mouse_genomes_project X 149598096 149599458 - Maged2 protein_coding processed_transcript MGP_LPJ_T0097467.1 MGP_LPJ_G0036073.1 mouse_genomes_project X 149598134 149601281 - MGP_LPJ_P0097467 Maged2 protein_coding protein_coding MGP_LPJ_T0097468.1 MGP_LPJ_G0036073.1 mouse_genomes_project X 149598871 149599958 - MGP_LPJ_P0097468 Maged2 protein_coding protein_coding MGP_LPJ_T0016428.1 MGP_LPJ_G0014519.1 mouse_genomes_project X 79453754 79454556 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016753.1 MGP_LPJ_G0014844.1 mouse_genomes_project X 141671881 141672911 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098435.1 MGP_LPJ_G0036716.1 mouse_genomes_project X 93530006 93530142 - Gm24718 scaRNA scaRNA MGP_LPJ_T0011171.1 MGP_LPJ_G0009289.1 mouse_genomes_project X 55641029 55641129 - Gm44500 miRNA miRNA MGP_LPJ_T0096053.1 MGP_LPJ_G0035686.1 mouse_genomes_project X 69465458 69468606 - MGP_LPJ_P0096053 Cetn2 protein_coding protein_coding MGP_LPJ_T0096054.1 MGP_LPJ_G0035686.1 mouse_genomes_project X 69465958 69470066 - MGP_LPJ_P0096054 Cetn2 protein_coding protein_coding MGP_LPJ_T0096055.1 MGP_LPJ_G0035686.1 mouse_genomes_project X 69466662 69470034 - MGP_LPJ_P0096055 Cetn2 protein_coding protein_coding MGP_LPJ_T0016341.1 MGP_LPJ_G0014432.1 mouse_genomes_project X 61087138 61088449 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099875.1 MGP_LPJ_G0038138.1 mouse_genomes_project X 9052227 9052318 - Gm25552 snRNA snRNA MGP_LPJ_T0016819.1 MGP_LPJ_G0014910.1 mouse_genomes_project X 156479769 156480679 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016165.1 MGP_LPJ_G0014256.1 mouse_genomes_project X 6650383 6650506 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095726.1 MGP_LPJ_G0035573.1 mouse_genomes_project X 43292468 43381258 - MGP_LPJ_P0095726 Smarca1 protein_coding protein_coding MGP_LPJ_T0095727.1 MGP_LPJ_G0035573.1 mouse_genomes_project X 43292470 43381258 - MGP_LPJ_P0095727 Smarca1 protein_coding protein_coding MGP_LPJ_T0095728.1 MGP_LPJ_G0035573.1 mouse_genomes_project X 43292733 43381291 - MGP_LPJ_P0095728 Smarca1 protein_coding protein_coding MGP_LPJ_T0095729.1 MGP_LPJ_G0035573.1 mouse_genomes_project X 43327520 43381135 - MGP_LPJ_P0095729 Smarca1 protein_coding protein_coding MGP_LPJ_T0095730.1 MGP_LPJ_G0035573.1 mouse_genomes_project X 43353370 43381171 - MGP_LPJ_P0095730 Smarca1 protein_coding protein_coding MGP_LPJ_T0095731.1 MGP_LPJ_G0035573.1 mouse_genomes_project X 43375905 43381680 - MGP_LPJ_P0095731 Smarca1 protein_coding protein_coding MGP_LPJ_T0095732.1 MGP_LPJ_G0035573.1 mouse_genomes_project X 43378566 43381713 - Smarca1 protein_coding processed_transcript MGP_LPJ_T0016140.1 MGP_LPJ_G0014231.1 mouse_genomes_project X 2158506 2158801 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095164.1 MGP_LPJ_G0035399.1 mouse_genomes_project X 2208099 2219753 - MGP_LPJ_P0095164 Ccdc22 protein_coding protein_coding MGP_LPJ_T0095165.1 MGP_LPJ_G0035399.1 mouse_genomes_project X 2208100 2211570 - Ccdc22 protein_coding retained_intron MGP_LPJ_T0016277.1 MGP_LPJ_G0014368.1 mouse_genomes_project X 45105109 45105368 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016793.1 MGP_LPJ_G0014884.1 mouse_genomes_project X 150620355 150620742 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095842.1 MGP_LPJ_G0035608.1 mouse_genomes_project X 48555163 48590188 + MGP_LPJ_P0095842 Hprt protein_coding protein_coding MGP_LPJ_T0095843.1 MGP_LPJ_G0035608.1 mouse_genomes_project X 48555250 48589643 + MGP_LPJ_P0095843 Hprt protein_coding unknown_likely_coding MGP_LPJ_T0095434.1 MGP_LPJ_G0035470.1 mouse_genomes_project X 11848891 11962218 - MGP_LPJ_P0095434 Maob protein_coding protein_coding MGP_LPJ_T0095435.1 MGP_LPJ_G0035470.1 mouse_genomes_project X 11849648 11962127 - MGP_LPJ_P0095435 Maob protein_coding nonsense_mediated_decay MGP_LPJ_T0095436.1 MGP_LPJ_G0035470.1 mouse_genomes_project X 11858803 11962127 - MGP_LPJ_P0095436 Maob protein_coding nonsense_mediated_decay MGP_LPJ_T0095437.1 MGP_LPJ_G0035470.1 mouse_genomes_project X 11883199 11962172 - MGP_LPJ_P0095437 Maob protein_coding nonsense_mediated_decay MGP_LPJ_T0016664.1 MGP_LPJ_G0014755.1 mouse_genomes_project X 124755460 124757497 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016707.1 MGP_LPJ_G0014798.1 mouse_genomes_project X 135112313 135112650 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097829.1 MGP_LPJ_G0036165.1 mouse_genomes_project X 166462010 166464232 - MGP_LPJ_P0097829 Tmsb4x protein_coding protein_coding MGP_LPJ_T0097830.1 MGP_LPJ_G0036165.1 mouse_genomes_project X 166462012 166464066 - MGP_LPJ_P0097830 Tmsb4x protein_coding protein_coding MGP_LPJ_T0097831.1 MGP_LPJ_G0036165.1 mouse_genomes_project X 166462209 166463744 - MGP_LPJ_P0097831 Tmsb4x protein_coding protein_coding MGP_LPJ_T0011776.1 MGP_LPJ_G0009894.1 mouse_genomes_project X 98197174 98197502 + Gm22160 misc_RNA misc_RNA MGP_LPJ_T0016234.1 MGP_LPJ_G0014325.1 mouse_genomes_project X 34840436 34840843 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009432.1 MGP_LPJ_G0007565.1 mouse_genomes_project X 110624313 110653414 - Gm14936 lincRNA lincRNA MGP_LPJ_T0096855.1 MGP_LPJ_G0035887.1 mouse_genomes_project X 101642021 101666101 - MGP_LPJ_P0096855 Rlim protein_coding protein_coding MGP_LPJ_T0096856.1 MGP_LPJ_G0035887.1 mouse_genomes_project X 101642021 101666101 - MGP_LPJ_P0096856 Rlim protein_coding protein_coding MGP_LPJ_T0096857.1 MGP_LPJ_G0035887.1 mouse_genomes_project X 101662611 101666101 - Rlim protein_coding retained_intron MGP_LPJ_T0097527.1 MGP_LPJ_G0036081.1 mouse_genomes_project X 150850953 150853509 + MGP_LPJ_P0097527 Hsd17b10 protein_coding protein_coding MGP_LPJ_T0097528.1 MGP_LPJ_G0036081.1 mouse_genomes_project X 150850953 150853509 + MGP_LPJ_P0097528 Hsd17b10 protein_coding protein_coding MGP_LPJ_T0097529.1 MGP_LPJ_G0036081.1 mouse_genomes_project X 150851257 150853509 + Hsd17b10 protein_coding processed_transcript MGP_LPJ_T0097530.1 MGP_LPJ_G0036081.1 mouse_genomes_project X 150852463 150853509 + Hsd17b10 protein_coding retained_intron MGP_LPJ_T0016858.1 MGP_LPJ_G0014949.1 mouse_genomes_project X 163002707 163002923 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016663.1 MGP_LPJ_G0014754.1 mouse_genomes_project X 124563675 124564178 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016563.1 MGP_LPJ_G0014654.1 mouse_genomes_project X 101688765 101689037 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016445.1 MGP_LPJ_G0014536.1 mouse_genomes_project X 84710510 84711518 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097132.1 MGP_LPJ_G0035977.1 mouse_genomes_project X 132826094 132829989 - MGP_LPJ_P0097132 Armcx6 protein_coding protein_coding MGP_LPJ_T0097133.1 MGP_LPJ_G0035977.1 mouse_genomes_project X 132826096 132830075 - MGP_LPJ_P0097133 Armcx6 protein_coding protein_coding MGP_LPJ_T0097134.1 MGP_LPJ_G0035977.1 mouse_genomes_project X 132828627 132830005 - Armcx6 protein_coding processed_transcript MGP_LPJ_T0097135.1 MGP_LPJ_G0035977.1 mouse_genomes_project X 132828807 132830019 - Armcx6 protein_coding processed_transcript MGP_LPJ_T0011208.1 MGP_LPJ_G0009326.1 mouse_genomes_project X 93629139 93629249 + Mir223 miRNA miRNA MGP_LPJ_T0097139.1 MGP_LPJ_G0035979.1 mouse_genomes_project X 132890107 132893486 - MGP_LPJ_P0097139 Armcx2 protein_coding protein_coding MGP_LPJ_T0097140.1 MGP_LPJ_G0035979.1 mouse_genomes_project X 132890109 132895181 - MGP_LPJ_P0097140 Armcx2 protein_coding protein_coding MGP_LPJ_T0097141.1 MGP_LPJ_G0035979.1 mouse_genomes_project X 132890109 132894956 - MGP_LPJ_P0097141 Armcx2 protein_coding protein_coding MGP_LPJ_T0097142.1 MGP_LPJ_G0035979.1 mouse_genomes_project X 132890109 132895181 - MGP_LPJ_P0097142 Armcx2 protein_coding protein_coding MGP_LPJ_T0097143.1 MGP_LPJ_G0035979.1 mouse_genomes_project X 132892447 132893472 - Armcx2 protein_coding processed_transcript MGP_LPJ_T0097144.1 MGP_LPJ_G0035979.1 mouse_genomes_project X 132893222 132893903 - Armcx2 protein_coding processed_transcript MGP_LPJ_T0097145.1 MGP_LPJ_G0035979.1 mouse_genomes_project X 132893847 132894921 - Armcx2 protein_coding processed_transcript MGP_LPJ_T0016616.1 MGP_LPJ_G0014707.1 mouse_genomes_project X 111818289 111819028 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016257.1 MGP_LPJ_G0014348.1 mouse_genomes_project X 39215089 39215724 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011178.1 MGP_LPJ_G0009296.1 mouse_genomes_project X 63151001 63151079 - Mir883b miRNA miRNA MGP_LPJ_T0099894.1 MGP_LPJ_G0038157.1 mouse_genomes_project X 52614264 52614429 + Gm26312 snRNA snRNA MGP_LPJ_T0097110.1 MGP_LPJ_G0035972.1 mouse_genomes_project X 132651918 132654321 + MGP_LPJ_P0097110 Rpl36a protein_coding protein_coding MGP_LPJ_T0097111.1 MGP_LPJ_G0035972.1 mouse_genomes_project X 132651953 132654327 + Rpl36a protein_coding retained_intron MGP_LPJ_T0097112.1 MGP_LPJ_G0035972.1 mouse_genomes_project X 132651954 132654327 + MGP_LPJ_P0097112 Rpl36a protein_coding nonsense_mediated_decay MGP_LPJ_T0097113.1 MGP_LPJ_G0035972.1 mouse_genomes_project X 132651965 132654298 + Rpl36a protein_coding retained_intron MGP_LPJ_T0097114.1 MGP_LPJ_G0035972.1 mouse_genomes_project X 132652354 132653281 + Rpl36a protein_coding retained_intron MGP_LPJ_T0097115.1 MGP_LPJ_G0035972.1 mouse_genomes_project X 132653345 132654261 + Rpl36a protein_coding retained_intron MGP_LPJ_T0097604.1 MGP_LPJ_G0036109.1 mouse_genomes_project X 154569029 154619584 - MGP_LPJ_P0097604 Ptchd1 protein_coding protein_coding MGP_LPJ_T0097605.1 MGP_LPJ_G0036109.1 mouse_genomes_project X 154569115 154619377 - MGP_LPJ_P0097605 Ptchd1 protein_coding protein_coding MGP_LPJ_T0097606.1 MGP_LPJ_G0036109.1 mouse_genomes_project X 154582171 154620073 - Ptchd1 protein_coding processed_transcript MGP_LPJ_T0016163.1 MGP_LPJ_G0014254.1 mouse_genomes_project X 6181435 6182064 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095365.1 MGP_LPJ_G0035452.1 mouse_genomes_project X 4966185 5057246 - MGP_LPJ_P0095365 Srpx protein_coding protein_coding MGP_LPJ_T0095366.1 MGP_LPJ_G0035452.1 mouse_genomes_project X 4966763 5057273 - MGP_LPJ_P0095366 Srpx protein_coding protein_coding MGP_LPJ_T0095367.1 MGP_LPJ_G0035452.1 mouse_genomes_project X 4967114 5057169 - MGP_LPJ_P0095367 Srpx protein_coding protein_coding MGP_LPJ_T0095368.1 MGP_LPJ_G0035452.1 mouse_genomes_project X 5009181 5057240 - Srpx protein_coding processed_transcript MGP_LPJ_T0099924.1 MGP_LPJ_G0038187.1 mouse_genomes_project X 113030402 113030526 - Gm25366 snRNA snRNA MGP_LPJ_T0016315.1 MGP_LPJ_G0014406.1 mouse_genomes_project X 56506265 56507096 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097625.1 MGP_LPJ_G0036115.1 mouse_genomes_project X 156761321 156813481 + MGP_LPJ_P0097625 Smpx protein_coding nonsense_mediated_decay MGP_LPJ_T0097626.1 MGP_LPJ_G0036115.1 mouse_genomes_project X 156761321 156765424 + MGP_LPJ_P0097626 Smpx protein_coding protein_coding MGP_LPJ_T0097627.1 MGP_LPJ_G0036115.1 mouse_genomes_project X 156761384 156813479 + MGP_LPJ_P0097627 Smpx protein_coding protein_coding MGP_LPJ_T0097628.1 MGP_LPJ_G0036115.1 mouse_genomes_project X 156761538 156813479 + MGP_LPJ_P0097628 Smpx protein_coding protein_coding MGP_LPJ_T0097629.1 MGP_LPJ_G0036115.1 mouse_genomes_project X 156761671 156813104 + MGP_LPJ_P0097629 Smpx protein_coding nonsense_mediated_decay MGP_LPJ_T0097630.1 MGP_LPJ_G0036115.1 mouse_genomes_project X 156765009 156813131 + MGP_LPJ_P0097630 Smpx protein_coding protein_coding MGP_LPJ_T0097631.1 MGP_LPJ_G0036115.1 mouse_genomes_project X 156777054 156813101 + Smpx protein_coding retained_intron MGP_LPJ_T0097632.1 MGP_LPJ_G0036115.1 mouse_genomes_project X 156783187 156813173 + Smpx protein_coding retained_intron MGP_LPJ_T0095143.1 MGP_LPJ_G0035393.1 mouse_genomes_project X 1574906 1622066 - MGP_LPJ_P0095143 Ccnb3 protein_coding protein_coding MGP_LPJ_T0095144.1 MGP_LPJ_G0035393.1 mouse_genomes_project X 1574906 1631288 - MGP_LPJ_P0095144 Ccnb3 protein_coding protein_coding MGP_LPJ_T0016788.1 MGP_LPJ_G0014879.1 mouse_genomes_project X 149983883 149984268 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016805.1 MGP_LPJ_G0014896.1 mouse_genomes_project X 153727407 153728393 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016349.1 MGP_LPJ_G0014440.1 mouse_genomes_project X 63329491 63330928 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096029.1 MGP_LPJ_G0035675.1 mouse_genomes_project X 68180407 68199656 + MGP_LPJ_P0096029 Gpr50 protein_coding protein_coding MGP_LPJ_T0096030.1 MGP_LPJ_G0035675.1 mouse_genomes_project X 68180706 68197791 + Gpr50 protein_coding processed_transcript MGP_LPJ_T0096031.1 MGP_LPJ_G0035675.1 mouse_genomes_project X 68180706 68197791 + Gpr50 protein_coding processed_transcript MGP_LPJ_T0097209.1 MGP_LPJ_G0036009.1 mouse_genomes_project X 135110932 135122340 - MGP_LPJ_P0097209 Morf4l2 protein_coding protein_coding MGP_LPJ_T0097210.1 MGP_LPJ_G0036009.1 mouse_genomes_project X 135110932 135124361 - MGP_LPJ_P0097210 Morf4l2 protein_coding protein_coding MGP_LPJ_T0097211.1 MGP_LPJ_G0036009.1 mouse_genomes_project X 135110943 135121834 - MGP_LPJ_P0097211 Morf4l2 protein_coding protein_coding MGP_LPJ_T0097212.1 MGP_LPJ_G0036009.1 mouse_genomes_project X 135110943 135123599 - MGP_LPJ_P0097212 Morf4l2 protein_coding protein_coding MGP_LPJ_T0097213.1 MGP_LPJ_G0036009.1 mouse_genomes_project X 135110943 135122031 - MGP_LPJ_P0097213 Morf4l2 protein_coding protein_coding MGP_LPJ_T0097214.1 MGP_LPJ_G0036009.1 mouse_genomes_project X 135116276 135121955 - Morf4l2 protein_coding processed_transcript MGP_LPJ_T0095952.1 MGP_LPJ_G0035650.1 mouse_genomes_project X 58329871 58338451 + MGP_LPJ_P0095952 4933402E13Rik protein_coding protein_coding MGP_LPJ_T0095953.1 MGP_LPJ_G0035650.1 mouse_genomes_project X 58333514 58338451 + MGP_LPJ_P0095953 4933402E13Rik protein_coding protein_coding MGP_LPJ_T0016389.1 MGP_LPJ_G0014480.1 mouse_genomes_project X 71621849 71622865 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011794.1 MGP_LPJ_G0009912.1 mouse_genomes_project X 139152878 139153180 - Gm22025 misc_RNA misc_RNA MGP_LPJ_T0016182.1 MGP_LPJ_G0014273.1 mouse_genomes_project X 10083332 10084209 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095219.1 MGP_LPJ_G0035410.1 mouse_genomes_project X 2401183 2404695 + Tfe3 protein_coding retained_intron MGP_LPJ_T0095220.1 MGP_LPJ_G0035410.1 mouse_genomes_project X 2401209 2405391 + Tfe3 protein_coding processed_transcript MGP_LPJ_T0095221.1 MGP_LPJ_G0035410.1 mouse_genomes_project X 2401281 2413826 + MGP_LPJ_P0095221 Tfe3 protein_coding protein_coding MGP_LPJ_T0095222.1 MGP_LPJ_G0035410.1 mouse_genomes_project X 2401287 2413823 + MGP_LPJ_P0095222 Tfe3 protein_coding protein_coding MGP_LPJ_T0095223.1 MGP_LPJ_G0035410.1 mouse_genomes_project X 2401299 2413825 + MGP_LPJ_P0095223 Tfe3 protein_coding protein_coding MGP_LPJ_T0095224.1 MGP_LPJ_G0035410.1 mouse_genomes_project X 2401318 2413823 + MGP_LPJ_P0095224 Tfe3 protein_coding protein_coding MGP_LPJ_T0095225.1 MGP_LPJ_G0035410.1 mouse_genomes_project X 2401320 2413825 + Tfe3 protein_coding retained_intron MGP_LPJ_T0095226.1 MGP_LPJ_G0035410.1 mouse_genomes_project X 2401390 2413826 + MGP_LPJ_P0095226 Tfe3 protein_coding nonsense_mediated_decay MGP_LPJ_T0095227.1 MGP_LPJ_G0035410.1 mouse_genomes_project X 2402566 2405416 + MGP_LPJ_P0095227 Tfe3 protein_coding protein_coding MGP_LPJ_T0095228.1 MGP_LPJ_G0035410.1 mouse_genomes_project X 2402582 2413825 + MGP_LPJ_P0095228 Tfe3 protein_coding protein_coding MGP_LPJ_T0095229.1 MGP_LPJ_G0035410.1 mouse_genomes_project X 2402664 2413821 + MGP_LPJ_P0095229 Tfe3 protein_coding protein_coding MGP_LPJ_T0095230.1 MGP_LPJ_G0035410.1 mouse_genomes_project X 2402710 2413823 + MGP_LPJ_P0095230 Tfe3 protein_coding protein_coding MGP_LPJ_T0095231.1 MGP_LPJ_G0035410.1 mouse_genomes_project X 2403275 2413821 + Tfe3 protein_coding retained_intron MGP_LPJ_T0095232.1 MGP_LPJ_G0035410.1 mouse_genomes_project X 2408053 2409942 + Tfe3 protein_coding retained_intron MGP_LPJ_T0096680.1 MGP_LPJ_G0035835.1 mouse_genomes_project X 97822251 97832001 - MGP_LPJ_P0096680 Awat2 protein_coding protein_coding MGP_LPJ_T0016738.1 MGP_LPJ_G0014829.1 mouse_genomes_project X 140195153 140195636 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097693.1 MGP_LPJ_G0036128.1 mouse_genomes_project X 159877205 159909897 + MGP_LPJ_P0097693 Rs1 protein_coding protein_coding MGP_LPJ_T0097694.1 MGP_LPJ_G0036128.1 mouse_genomes_project X 159877372 159905087 + MGP_LPJ_P0097694 Rs1 protein_coding protein_coding MGP_LPJ_T0097698.1 MGP_LPJ_G0036128.1 mouse_genomes_project X 159901734 159905584 + Rs1 protein_coding processed_transcript MGP_LPJ_T0101156.1 MGP_LPJ_G0039419.1 mouse_genomes_project X 53305538 53305609 - Snord61 snoRNA snoRNA MGP_LPJ_T0095601.1 MGP_LPJ_G0035531.1 mouse_genomes_project X 32771328 32777687 + MGP_LPJ_P0095601 Rhox2e protein_coding protein_coding MGP_LPJ_T0016284.1 MGP_LPJ_G0014375.1 mouse_genomes_project X 47126243 47126441 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096964.1 MGP_LPJ_G0035919.1 mouse_genomes_project X 106862452 106870756 - MGP_LPJ_P0096964 Hmgn5 protein_coding protein_coding MGP_LPJ_T0095155.1 MGP_LPJ_G0035397.1 mouse_genomes_project X 2168728 2188231 - MGP_LPJ_P0095155 Ppp1r3f protein_coding protein_coding MGP_LPJ_T0095156.1 MGP_LPJ_G0035397.1 mouse_genomes_project X 2170384 2188196 - MGP_LPJ_P0095156 Ppp1r3f protein_coding protein_coding MGP_LPJ_T0095157.1 MGP_LPJ_G0035397.1 mouse_genomes_project X 2170654 2178235 - Ppp1r3f protein_coding processed_transcript MGP_LPJ_T0095158.1 MGP_LPJ_G0035397.1 mouse_genomes_project X 2171674 2186791 - MGP_LPJ_P0095158 Ppp1r3f protein_coding protein_coding MGP_LPJ_T0095159.1 MGP_LPJ_G0035397.1 mouse_genomes_project X 2173662 2178266 - Ppp1r3f protein_coding processed_transcript MGP_LPJ_T0097257.1 MGP_LPJ_G0036023.1 mouse_genomes_project X 137617323 137619105 + MGP_LPJ_P0097257 4933428M09Rik protein_coding protein_coding MGP_LPJ_T0095294.1 MGP_LPJ_G0035425.1 mouse_genomes_project X 2739346 2747873 - MGP_LPJ_P0095294 Was protein_coding protein_coding MGP_LPJ_T0016145.1 MGP_LPJ_G0014236.1 mouse_genomes_project X 2692835 2693221 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016481.1 MGP_LPJ_G0014572.1 mouse_genomes_project X 91083346 91085364 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009422.1 MGP_LPJ_G0007562.1 mouse_genomes_project X 101231737 101307110 - Ftx lincRNA lincRNA MGP_LPJ_T0009423.1 MGP_LPJ_G0007562.1 mouse_genomes_project X 101244303 101298379 - Ftx lincRNA lincRNA MGP_LPJ_T0009424.1 MGP_LPJ_G0007562.1 mouse_genomes_project X 101250974 101298300 - Ftx lincRNA lincRNA MGP_LPJ_T0009425.1 MGP_LPJ_G0007562.1 mouse_genomes_project X 101250974 101307019 - Ftx lincRNA lincRNA MGP_LPJ_T0009426.1 MGP_LPJ_G0007562.1 mouse_genomes_project X 101289992 101307110 - Ftx lincRNA lincRNA MGP_LPJ_T0011200.1 MGP_LPJ_G0009318.1 mouse_genomes_project X 70591062 70591133 - Mir5132 miRNA miRNA MGP_LPJ_T0097825.1 MGP_LPJ_G0036163.1 mouse_genomes_project X 165757301 165767991 - MGP_LPJ_P0097825 Tceanc protein_coding protein_coding MGP_LPJ_T0097826.1 MGP_LPJ_G0036163.1 mouse_genomes_project X 165759801 165760881 - MGP_LPJ_P0097826 Tceanc protein_coding protein_coding MGP_LPJ_T0097827.1 MGP_LPJ_G0036163.1 mouse_genomes_project X 165760775 165776022 - MGP_LPJ_P0097827 Tceanc protein_coding protein_coding MGP_LPJ_T0096800.1 MGP_LPJ_G0035864.1 mouse_genomes_project X 99337526 99443027 + Nhsl2 protein_coding processed_transcript MGP_LPJ_T0096801.1 MGP_LPJ_G0035864.1 mouse_genomes_project X 99337526 99572595 + MGP_LPJ_P0096801 Nhsl2 protein_coding protein_coding MGP_LPJ_T0096802.1 MGP_LPJ_G0035864.1 mouse_genomes_project X 99337526 99588266 + MGP_LPJ_P0096802 Nhsl2 protein_coding protein_coding MGP_LPJ_T0096803.1 MGP_LPJ_G0035864.1 mouse_genomes_project X 99455188 99574200 + Nhsl2 protein_coding processed_transcript MGP_LPJ_T0096804.1 MGP_LPJ_G0035864.1 mouse_genomes_project X 99498730 99574175 + MGP_LPJ_P0096804 Nhsl2 protein_coding protein_coding MGP_LPJ_T0096805.1 MGP_LPJ_G0035864.1 mouse_genomes_project X 99546763 99568285 + Nhsl2 protein_coding processed_transcript MGP_LPJ_T0096809.1 MGP_LPJ_G0035864.1 mouse_genomes_project X 99569260 99576619 + Nhsl2 protein_coding processed_transcript MGP_LPJ_T0016474.1 MGP_LPJ_G0014565.1 mouse_genomes_project X 89000991 89003237 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011137.1 MGP_LPJ_G0009255.1 mouse_genomes_project X 1844762 1844858 - Mir532 miRNA miRNA MGP_LPJ_T0005643.1 MGP_LPJ_G0004754.1 mouse_genomes_project X 168331497 168405323 - Gm15261 antisense antisense MGP_LPJ_T0095194.1 MGP_LPJ_G0035406.1 mouse_genomes_project X 2333757 2336446 + protein_coding retained_intron MGP_LPJ_T0102484.1 MGP_LPJ_G0040520.1 mouse_genomes_project X 33241650 33242660 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0016874.1 MGP_LPJ_G0014965.1 mouse_genomes_project X 167384785 167385254 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009436.1 MGP_LPJ_G0007569.1 mouse_genomes_project X 126985396 126988246 + 4930558G05Rik lincRNA lincRNA MGP_LPJ_T0009414.1 MGP_LPJ_G0007559.1 mouse_genomes_project X 98182890 98197175 + lincRNA lincRNA MGP_LPJ_T0016756.1 MGP_LPJ_G0014847.1 mouse_genomes_project X 142715542 142715852 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005610.1 MGP_LPJ_G0004728.1 mouse_genomes_project X 53110447 53114123 + Gm14718 antisense antisense MGP_LPJ_T0101625.1 MGP_LPJ_G0039693.1 mouse_genomes_project X 32778006 32789139 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0016794.1 MGP_LPJ_G0014885.1 mouse_genomes_project X 151417520 151418428 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005617.1 MGP_LPJ_G0004734.1 mouse_genomes_project X 69957349 69966523 - Gm26726 antisense antisense MGP_LPJ_T0016875.1 MGP_LPJ_G0014966.1 mouse_genomes_project X 167661154 167661549 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102491.1 MGP_LPJ_G0040527.1 mouse_genomes_project X 53571766 53571910 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0016595.1 MGP_LPJ_G0014686.1 mouse_genomes_project X 108147542 108149948 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097358.1 MGP_LPJ_G0036057.1 mouse_genomes_project X 142019595 142304385 + MGP_LPJ_P0097358 Pak3 protein_coding protein_coding MGP_LPJ_T0097359.1 MGP_LPJ_G0036057.1 mouse_genomes_project X 142019702 142275959 + MGP_LPJ_P0097359 Pak3 protein_coding protein_coding MGP_LPJ_T0097360.1 MGP_LPJ_G0036057.1 mouse_genomes_project X 142167200 142304385 + MGP_LPJ_P0097360 Pak3 protein_coding protein_coding MGP_LPJ_T0097361.1 MGP_LPJ_G0036057.1 mouse_genomes_project X 142167283 142203989 + MGP_LPJ_P0097361 Pak3 protein_coding protein_coding MGP_LPJ_T0097362.1 MGP_LPJ_G0036057.1 mouse_genomes_project X 142167301 142227746 + MGP_LPJ_P0097362 Pak3 protein_coding protein_coding MGP_LPJ_T0097363.1 MGP_LPJ_G0036057.1 mouse_genomes_project X 142167436 142246042 + MGP_LPJ_P0097363 Pak3 protein_coding protein_coding MGP_LPJ_T0097364.1 MGP_LPJ_G0036057.1 mouse_genomes_project X 142167489 142304385 + MGP_LPJ_P0097364 Pak3 protein_coding protein_coding MGP_LPJ_T0097365.1 MGP_LPJ_G0036057.1 mouse_genomes_project X 142168655 142304385 + MGP_LPJ_P0097365 Pak3 protein_coding protein_coding MGP_LPJ_T0097366.1 MGP_LPJ_G0036057.1 mouse_genomes_project X 142168655 142304385 + MGP_LPJ_P0097366 Pak3 protein_coding protein_coding MGP_LPJ_T0097367.1 MGP_LPJ_G0036057.1 mouse_genomes_project X 142203890 142304389 + MGP_LPJ_P0097367 Pak3 protein_coding protein_coding MGP_LPJ_T0095439.1 MGP_LPJ_G0035472.1 mouse_genomes_project X 12289178 12501269 - MGP_LPJ_P0095439 Efhc2 protein_coding protein_coding MGP_LPJ_T0095661.1 MGP_LPJ_G0035557.1 mouse_genomes_project X 34002209 34006526 - MGP_LPJ_P0095661 C1galt1c1 protein_coding protein_coding MGP_LPJ_T0096354.1 MGP_LPJ_G0035735.1 mouse_genomes_project X 70971507 71014693 + MGP_LPJ_P0096354 Ikbkg protein_coding protein_coding MGP_LPJ_T0096355.1 MGP_LPJ_G0035735.1 mouse_genomes_project X 70971508 71033580 + MGP_LPJ_P0096355 Ikbkg protein_coding protein_coding MGP_LPJ_T0096356.1 MGP_LPJ_G0035735.1 mouse_genomes_project X 70971508 71033580 + MGP_LPJ_P0096356 Ikbkg protein_coding protein_coding MGP_LPJ_T0096357.1 MGP_LPJ_G0035735.1 mouse_genomes_project X 70971544 71020588 + MGP_LPJ_P0096357 Ikbkg protein_coding protein_coding MGP_LPJ_T0096361.1 MGP_LPJ_G0035735.1 mouse_genomes_project X 71005233 71020650 + MGP_LPJ_P0096361 Ikbkg protein_coding protein_coding MGP_LPJ_T0096362.1 MGP_LPJ_G0035735.1 mouse_genomes_project X 71005303 71028543 + MGP_LPJ_P0096362 Ikbkg protein_coding protein_coding MGP_LPJ_T0096363.1 MGP_LPJ_G0035735.1 mouse_genomes_project X 71005311 71033580 + MGP_LPJ_P0096363 Ikbkg protein_coding protein_coding MGP_LPJ_T0096364.1 MGP_LPJ_G0035735.1 mouse_genomes_project X 71005311 71033656 + MGP_LPJ_P0096364 Ikbkg protein_coding protein_coding MGP_LPJ_T0096365.1 MGP_LPJ_G0035735.1 mouse_genomes_project X 71005332 71028902 + MGP_LPJ_P0096365 Ikbkg protein_coding protein_coding MGP_LPJ_T0096366.1 MGP_LPJ_G0035735.1 mouse_genomes_project X 71005337 71013568 + MGP_LPJ_P0096366 Ikbkg protein_coding protein_coding MGP_LPJ_T0096368.1 MGP_LPJ_G0035735.1 mouse_genomes_project X 71008601 71017870 + MGP_LPJ_P0096368 Ikbkg protein_coding protein_coding MGP_LPJ_T0096369.1 MGP_LPJ_G0035735.1 mouse_genomes_project X 71009980 71024057 + MGP_LPJ_P0096369 Ikbkg protein_coding protein_coding MGP_LPJ_T0096370.1 MGP_LPJ_G0035735.1 mouse_genomes_project X 71010014 71033580 + MGP_LPJ_P0096370 Ikbkg protein_coding protein_coding MGP_LPJ_T0096371.1 MGP_LPJ_G0035735.1 mouse_genomes_project X 71010370 71030088 + MGP_LPJ_P0096371 Ikbkg protein_coding protein_coding MGP_LPJ_T0096372.1 MGP_LPJ_G0035735.1 mouse_genomes_project X 71010403 71031322 + MGP_LPJ_P0096372 Ikbkg protein_coding protein_coding MGP_LPJ_T0096373.1 MGP_LPJ_G0035735.1 mouse_genomes_project X 71010421 71014055 + Ikbkg protein_coding retained_intron MGP_LPJ_T0096374.1 MGP_LPJ_G0035735.1 mouse_genomes_project X 71010462 71024554 + MGP_LPJ_P0096374 Ikbkg protein_coding protein_coding MGP_LPJ_T0096375.1 MGP_LPJ_G0035735.1 mouse_genomes_project X 71019586 71028025 + Ikbkg protein_coding processed_transcript MGP_LPJ_T0016307.1 MGP_LPJ_G0014398.1 mouse_genomes_project X 54537150 54540277 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096035.1 MGP_LPJ_G0035678.1 mouse_genomes_project X 68504679 68508707 + MGP_LPJ_P0096035 Prrg3 protein_coding protein_coding MGP_LPJ_T0096036.1 MGP_LPJ_G0035678.1 mouse_genomes_project X 68504680 68512164 + MGP_LPJ_P0096036 Prrg3 protein_coding protein_coding MGP_LPJ_T0096037.1 MGP_LPJ_G0035678.1 mouse_genomes_project X 68505037 68514782 + MGP_LPJ_P0096037 Prrg3 protein_coding protein_coding MGP_LPJ_T0097581.1 MGP_LPJ_G0036098.1 mouse_genomes_project X 152590893 152602135 - MGP_LPJ_P0097581 Kctd12b protein_coding protein_coding MGP_LPJ_T0097582.1 MGP_LPJ_G0036098.1 mouse_genomes_project X 152590893 152602004 - MGP_LPJ_P0097582 Kctd12b protein_coding protein_coding MGP_LPJ_T0016173.1 MGP_LPJ_G0014264.1 mouse_genomes_project X 7938433 7939116 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101188.1 MGP_LPJ_G0039451.1 mouse_genomes_project X 133450720 133450834 - snoRNA snoRNA MGP_LPJ_T0102478.1 MGP_LPJ_G0040514.1 mouse_genomes_project X 4203117 4203380 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0101181.1 MGP_LPJ_G0039444.1 mouse_genomes_project X 118789974 118790102 + Gm22590 snoRNA snoRNA MGP_LPJ_T0009391.1 MGP_LPJ_G0007541.1 mouse_genomes_project X 41892662 42211613 - lincRNA lincRNA MGP_LPJ_T0016303.1 MGP_LPJ_G0014394.1 mouse_genomes_project X 53657862 53658448 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102514.1 MGP_LPJ_G0040550.1 mouse_genomes_project X 100396276 100398793 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0016405.1 MGP_LPJ_G0014496.1 mouse_genomes_project X 74470048 74470817 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096417.1 MGP_LPJ_G0035749.1 mouse_genomes_project X 72025797 72041243 + MGP_LPJ_P0096417 Fundc2 protein_coding protein_coding MGP_LPJ_T0096418.1 MGP_LPJ_G0035749.1 mouse_genomes_project X 72025818 72030812 + Fundc2 protein_coding retained_intron MGP_LPJ_T0096419.1 MGP_LPJ_G0035749.1 mouse_genomes_project X 72030437 72037669 + Fundc2 protein_coding processed_transcript MGP_LPJ_T0095521.1 MGP_LPJ_G0035496.1 mouse_genomes_project X 16249793 16259849 - MGP_LPJ_P0095521 Zfp300 protein_coding protein_coding MGP_LPJ_T0095522.1 MGP_LPJ_G0035496.1 mouse_genomes_project X 16252205 16259838 - MGP_LPJ_P0095522 Zfp300 protein_coding unknown_likely_coding MGP_LPJ_T0095523.1 MGP_LPJ_G0035496.1 mouse_genomes_project X 16254561 16259606 - Zfp300 protein_coding retained_intron MGP_LPJ_T0095524.1 MGP_LPJ_G0035496.1 mouse_genomes_project X 16254869 16260147 - Zfp300 protein_coding processed_transcript MGP_LPJ_T0016166.1 MGP_LPJ_G0014257.1 mouse_genomes_project X 6838504 6838945 + processed_pseudogene processed_pseudogene MGP_LPJ_T0018578.1 MGP_LPJ_G0015697.1 mouse_genomes_project X 48624989 48627135 - C430049B03Rik processed_transcript processed_transcript MGP_LPJ_T0018579.1 MGP_LPJ_G0015697.1 mouse_genomes_project X 48625150 48627105 - C430049B03Rik processed_transcript processed_transcript MGP_LPJ_T0018580.1 MGP_LPJ_G0015697.1 mouse_genomes_project X 48625713 48627133 - C430049B03Rik processed_transcript processed_transcript MGP_LPJ_T0018581.1 MGP_LPJ_G0015697.1 mouse_genomes_project X 48626137 48627135 - C430049B03Rik processed_transcript processed_transcript MGP_LPJ_T0095637.1 MGP_LPJ_G0035551.1 mouse_genomes_project X 33537187 33545070 + MGP_LPJ_P0095637 Zbtb33 protein_coding protein_coding MGP_LPJ_T0095638.1 MGP_LPJ_G0035551.1 mouse_genomes_project X 33537206 33542079 + MGP_LPJ_P0095638 Zbtb33 protein_coding protein_coding MGP_LPJ_T0095639.1 MGP_LPJ_G0035551.1 mouse_genomes_project X 33537228 33541463 + MGP_LPJ_P0095639 Zbtb33 protein_coding protein_coding MGP_LPJ_T0016146.1 MGP_LPJ_G0014237.1 mouse_genomes_project X 2696424 2696853 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016519.1 MGP_LPJ_G0014610.1 mouse_genomes_project X 97139377 97139671 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102519.1 MGP_LPJ_G0040555.1 mouse_genomes_project X 135526064 135533263 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0016796.1 MGP_LPJ_G0014887.1 mouse_genomes_project X 151767464 151769440 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096799.1 MGP_LPJ_G0035863.1 mouse_genomes_project X 99277964 99283114 + MGP_LPJ_P0096799 8030474K03Rik protein_coding protein_coding MGP_LPJ_T0097204.1 MGP_LPJ_G0036006.1 mouse_genomes_project X 134741335 134764980 - MGP_LPJ_P0097204 Kir3dl2 protein_coding protein_coding MGP_LPJ_T0101180.1 MGP_LPJ_G0039443.1 mouse_genomes_project X 117220201 117220317 - Gm26182 snoRNA snoRNA MGP_LPJ_T0016701.1 MGP_LPJ_G0014792.1 mouse_genomes_project X 134868366 134875281 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099908.1 MGP_LPJ_G0038171.1 mouse_genomes_project X 90017849 90017954 + Gm25332 snRNA snRNA MGP_LPJ_T0102510.1 MGP_LPJ_G0040546.1 mouse_genomes_project X 92976025 92976560 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0016361.1 MGP_LPJ_G0014452.1 mouse_genomes_project X 65333090 65333946 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097824.1 MGP_LPJ_G0036162.1 mouse_genomes_project X 165709092 165735911 - MGP_LPJ_P0097824 Rab9 protein_coding protein_coding MGP_LPJ_T0009428.1 MGP_LPJ_G0007564.1 mouse_genomes_project X 103075150 103119929 - 5330434G04Rik lincRNA lincRNA MGP_LPJ_T0009429.1 MGP_LPJ_G0007564.1 mouse_genomes_project X 103077228 103119929 - 5330434G04Rik lincRNA lincRNA MGP_LPJ_T0009430.1 MGP_LPJ_G0007564.1 mouse_genomes_project X 103101763 103119907 - 5330434G04Rik lincRNA lincRNA MGP_LPJ_T0009431.1 MGP_LPJ_G0007564.1 mouse_genomes_project X 103104431 103116067 - 5330434G04Rik lincRNA lincRNA MGP_LPJ_T0095142.1 MGP_LPJ_G0035392.1 mouse_genomes_project X 1415561 1537356 + MGP_LPJ_P0095142 Dgkk protein_coding protein_coding MGP_LPJ_T0002507.1 MGP_LPJ_G0002413.1 mouse_genomes_project X 132823118 132824544 - TEC TEC MGP_LPJ_T0099889.1 MGP_LPJ_G0038152.1 mouse_genomes_project X 38635329 38635519 + Gm24763 snRNA snRNA MGP_LPJ_T0016412.1 MGP_LPJ_G0014503.1 mouse_genomes_project X 75377856 75378811 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097323.1 MGP_LPJ_G0036041.1 mouse_genomes_project X 139465046 139472573 - MGP_LPJ_P0097323 Psmd10 protein_coding protein_coding MGP_LPJ_T0096937.1 MGP_LPJ_G0035911.1 mouse_genomes_project X 105037058 105084319 + MGP_LPJ_P0096937 Gpr174 protein_coding protein_coding MGP_LPJ_T0096938.1 MGP_LPJ_G0035911.1 mouse_genomes_project X 105037103 105084914 + MGP_LPJ_P0096938 Gpr174 protein_coding protein_coding MGP_LPJ_T0096939.1 MGP_LPJ_G0035911.1 mouse_genomes_project X 105037160 105083454 + MGP_LPJ_P0096939 Gpr174 protein_coding protein_coding MGP_LPJ_T0096940.1 MGP_LPJ_G0035911.1 mouse_genomes_project X 105037474 105083466 + MGP_LPJ_P0096940 Gpr174 protein_coding protein_coding MGP_LPJ_T0096941.1 MGP_LPJ_G0035911.1 mouse_genomes_project X 105050318 105080469 + Gpr174 protein_coding processed_transcript MGP_LPJ_T0096942.1 MGP_LPJ_G0035911.1 mouse_genomes_project X 105071755 105080600 + Gpr174 protein_coding processed_transcript MGP_LPJ_T0096943.1 MGP_LPJ_G0035911.1 mouse_genomes_project X 105071755 105084916 + MGP_LPJ_P0096943 Gpr174 protein_coding protein_coding MGP_LPJ_T0096926.1 MGP_LPJ_G0035907.1 mouse_genomes_project X 104593823 104597390 - MGP_LPJ_P0096926 Zcchc5 protein_coding protein_coding MGP_LPJ_T0097490.1 MGP_LPJ_G0036078.1 mouse_genomes_project X 150163609 150292073 + Fam120c protein_coding retained_intron MGP_LPJ_T0097491.1 MGP_LPJ_G0036078.1 mouse_genomes_project X 150163609 150292073 + MGP_LPJ_P0097491 Fam120c protein_coding protein_coding MGP_LPJ_T0016191.1 MGP_LPJ_G0014282.1 mouse_genomes_project X 12869372 12871227 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011165.1 MGP_LPJ_G0009283.1 mouse_genomes_project X 48619359 48619444 - Mir542 miRNA miRNA MGP_LPJ_T0016295.1 MGP_LPJ_G0014386.1 mouse_genomes_project X 49712293 49712557 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016158.1 MGP_LPJ_G0014249.1 mouse_genomes_project X 4275838 4276536 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096308.1 MGP_LPJ_G0035728.1 mouse_genomes_project X 70883805 70890638 + MGP_LPJ_P0096308 Gdi1 protein_coding protein_coding MGP_LPJ_T0096309.1 MGP_LPJ_G0035728.1 mouse_genomes_project X 70883819 70890636 + Gdi1 protein_coding retained_intron MGP_LPJ_T0096310.1 MGP_LPJ_G0035728.1 mouse_genomes_project X 70884063 70885802 + Gdi1 protein_coding processed_transcript MGP_LPJ_T0096311.1 MGP_LPJ_G0035728.1 mouse_genomes_project X 70884074 70890634 + Gdi1 protein_coding retained_intron MGP_LPJ_T0096312.1 MGP_LPJ_G0035728.1 mouse_genomes_project X 70884120 70885939 + MGP_LPJ_P0096312 Gdi1 protein_coding protein_coding MGP_LPJ_T0096313.1 MGP_LPJ_G0035728.1 mouse_genomes_project X 70884635 70885980 + Gdi1 protein_coding processed_transcript MGP_LPJ_T0096314.1 MGP_LPJ_G0035728.1 mouse_genomes_project X 70885943 70888357 + Gdi1 protein_coding retained_intron MGP_LPJ_T0096315.1 MGP_LPJ_G0035728.1 mouse_genomes_project X 70887950 70889946 + MGP_LPJ_P0096315 Gdi1 protein_coding protein_coding MGP_LPJ_T0096316.1 MGP_LPJ_G0035728.1 mouse_genomes_project X 70888641 70889726 + Gdi1 protein_coding processed_transcript MGP_LPJ_T0096317.1 MGP_LPJ_G0035728.1 mouse_genomes_project X 70889170 70889823 + Gdi1 protein_coding processed_transcript MGP_LPJ_T0016779.1 MGP_LPJ_G0014870.1 mouse_genomes_project X 145434369 145435342 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016601.1 MGP_LPJ_G0014692.1 mouse_genomes_project X 109920390 109920662 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097306.1 MGP_LPJ_G0036036.1 mouse_genomes_project X 138957047 138965833 + Prps1 protein_coding processed_transcript MGP_LPJ_T0097307.1 MGP_LPJ_G0036036.1 mouse_genomes_project X 138957047 138976513 + MGP_LPJ_P0097307 Prps1 protein_coding protein_coding MGP_LPJ_T0096051.1 MGP_LPJ_G0035685.1 mouse_genomes_project X 69365260 69382685 + MGP_LPJ_P0096051 Gabrq protein_coding protein_coding MGP_LPJ_T0096052.1 MGP_LPJ_G0035685.1 mouse_genomes_project X 69365518 69378627 + MGP_LPJ_P0096052 Gabrq protein_coding protein_coding MGP_LPJ_T0016374.1 MGP_LPJ_G0014465.1 mouse_genomes_project X 67993908 67994213 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016255.1 MGP_LPJ_G0014346.1 mouse_genomes_project X 38988162 38988445 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097276.1 MGP_LPJ_G0036029.1 mouse_genomes_project X 138265239 138268187 - MGP_LPJ_P0097276 Ripply1 protein_coding protein_coding MGP_LPJ_T0099918.1 MGP_LPJ_G0038181.1 mouse_genomes_project X 104351114 104351276 - Gm24622 snRNA snRNA MGP_LPJ_T0016130.1 MGP_LPJ_G0014221.1 mouse_genomes_project X 206483 207835 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016553.1 MGP_LPJ_G0014644.1 mouse_genomes_project X 101183530 101183959 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011196.1 MGP_LPJ_G0009314.1 mouse_genomes_project X 68785305 68785390 - Mir452 miRNA miRNA MGP_LPJ_T0095923.1 MGP_LPJ_G0035640.1 mouse_genomes_project X 53935650 53944516 + MGP_LPJ_P0095923 Zic3 protein_coding protein_coding MGP_LPJ_T0095924.1 MGP_LPJ_G0035640.1 mouse_genomes_project X 53943713 53949630 + MGP_LPJ_P0095924 Zic3 protein_coding protein_coding MGP_LPJ_T0095925.1 MGP_LPJ_G0035640.1 mouse_genomes_project X 53944066 53949630 + MGP_LPJ_P0095925 Zic3 protein_coding protein_coding MGP_LPJ_T0095926.1 MGP_LPJ_G0035640.1 mouse_genomes_project X 53944077 53954794 + MGP_LPJ_P0095926 Zic3 protein_coding protein_coding MGP_LPJ_T0096797.1 MGP_LPJ_G0035861.1 mouse_genomes_project X 99171084 99171517 - MGP_LPJ_P0096797 Vma21-ps protein_coding protein_coding MGP_LPJ_T0097428.1 MGP_LPJ_G0036070.1 mouse_genomes_project X 149331421 149354675 + MGP_LPJ_P0097428 Alas2 protein_coding protein_coding MGP_LPJ_T0097429.1 MGP_LPJ_G0036070.1 mouse_genomes_project X 149331505 149354659 + MGP_LPJ_P0097429 Alas2 protein_coding protein_coding MGP_LPJ_T0097430.1 MGP_LPJ_G0036070.1 mouse_genomes_project X 149336210 149354660 + MGP_LPJ_P0097430 Alas2 protein_coding unknown_likely_coding MGP_LPJ_T0097431.1 MGP_LPJ_G0036070.1 mouse_genomes_project X 149338083 149341710 + Alas2 protein_coding retained_intron MGP_LPJ_T0097432.1 MGP_LPJ_G0036070.1 mouse_genomes_project X 149350426 149354659 + Alas2 protein_coding processed_transcript MGP_LPJ_T0101164.1 MGP_LPJ_G0039427.1 mouse_genomes_project X 70850429 70850566 + Snora70 snoRNA snoRNA MGP_LPJ_T0018557.1 MGP_LPJ_G0015689.1 mouse_genomes_project X 2760054 2770604 + Gm6787 processed_transcript processed_transcript MGP_LPJ_T0016164.1 MGP_LPJ_G0014255.1 mouse_genomes_project X 6569290 6569506 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016650.1 MGP_LPJ_G0014741.1 mouse_genomes_project X 118741409 118742583 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016865.1 MGP_LPJ_G0014956.1 mouse_genomes_project X 165443393 165443792 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016763.1 MGP_LPJ_G0014854.1 mouse_genomes_project X 143359374 143359975 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009439.1 MGP_LPJ_G0007572.1 mouse_genomes_project X 139282666 139301818 + Eif2c5 lincRNA lincRNA MGP_LPJ_T0097843.1 MGP_LPJ_G0036168.1 mouse_genomes_project X 166589946 166626270 - MGP_LPJ_P0097843 Prps2 protein_coding protein_coding MGP_LPJ_T0097844.1 MGP_LPJ_G0036168.1 mouse_genomes_project X 166615945 166626231 - Prps2 protein_coding processed_transcript MGP_LPJ_T0096516.1 MGP_LPJ_G0035785.1 mouse_genomes_project X 82755055 82777916 + MGP_LPJ_P0096516 5430427O19Rik protein_coding protein_coding MGP_LPJ_T0011238.1 MGP_LPJ_G0009356.1 mouse_genomes_project X 145661398 145661510 + Mir448 miRNA miRNA MGP_LPJ_T0097240.1 MGP_LPJ_G0036016.1 mouse_genomes_project X 135469496 135504506 + MGP_LPJ_P0097240 Fam199x protein_coding protein_coding MGP_LPJ_T0016641.1 MGP_LPJ_G0014732.1 mouse_genomes_project X 115969469 115971274 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016821.1 MGP_LPJ_G0014912.1 mouse_genomes_project X 156667604 156667739 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095254.1 MGP_LPJ_G0035414.1 mouse_genomes_project X 2521034 2523187 + Pim2 protein_coding retained_intron MGP_LPJ_T0095255.1 MGP_LPJ_G0035414.1 mouse_genomes_project X 2521074 2526297 + MGP_LPJ_P0095255 Pim2 protein_coding protein_coding MGP_LPJ_T0095256.1 MGP_LPJ_G0035414.1 mouse_genomes_project X 2521078 2526293 + MGP_LPJ_P0095256 Pim2 protein_coding protein_coding MGP_LPJ_T0095257.1 MGP_LPJ_G0035414.1 mouse_genomes_project X 2521390 2524267 + Pim2 protein_coding processed_transcript MGP_LPJ_T0097020.1 MGP_LPJ_G0035939.1 mouse_genomes_project X 112529661 112530590 + MGP_LPJ_P0097020 Ube2dnl2 protein_coding protein_coding MGP_LPJ_T0016797.1 MGP_LPJ_G0014888.1 mouse_genomes_project X 151988556 151989088 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097832.1 MGP_LPJ_G0036166.1 mouse_genomes_project X 166492775 166507772 - MGP_LPJ_P0097832 Tlr8 protein_coding protein_coding MGP_LPJ_T0097833.1 MGP_LPJ_G0036166.1 mouse_genomes_project X 166492811 166507274 - MGP_LPJ_P0097833 Tlr8 protein_coding protein_coding MGP_LPJ_T0097834.1 MGP_LPJ_G0036166.1 mouse_genomes_project X 166494898 166507785 - Tlr8 protein_coding processed_transcript MGP_LPJ_T0097835.1 MGP_LPJ_G0036166.1 mouse_genomes_project X 166495622 166507815 - MGP_LPJ_P0097835 Tlr8 protein_coding protein_coding MGP_LPJ_T0097836.1 MGP_LPJ_G0036166.1 mouse_genomes_project X 166502838 166507770 - Tlr8 protein_coding processed_transcript MGP_LPJ_T0095396.1 MGP_LPJ_G0035460.1 mouse_genomes_project X 7687825 7775624 - MGP_LPJ_P0095396 Med14 protein_coding protein_coding MGP_LPJ_T0095397.1 MGP_LPJ_G0035460.1 mouse_genomes_project X 7691491 7728569 - MGP_LPJ_P0095397 Med14 protein_coding protein_coding MGP_LPJ_T0095398.1 MGP_LPJ_G0035460.1 mouse_genomes_project X 7692205 7775624 - Med14 protein_coding retained_intron MGP_LPJ_T0095399.1 MGP_LPJ_G0035460.1 mouse_genomes_project X 7718835 7726386 - Med14 protein_coding retained_intron MGP_LPJ_T0095400.1 MGP_LPJ_G0035460.1 mouse_genomes_project X 7721591 7775624 - MGP_LPJ_P0095400 Med14 protein_coding protein_coding MGP_LPJ_T0101158.1 MGP_LPJ_G0039421.1 mouse_genomes_project X 63987402 63987511 - Gm26276 snoRNA snoRNA MGP_LPJ_T0016852.1 MGP_LPJ_G0014943.1 mouse_genomes_project X 162049110 162049552 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097335.1 MGP_LPJ_G0036046.1 mouse_genomes_project X 140118295 140132581 - MGP_LPJ_P0097335 Irs4 protein_coding protein_coding MGP_LPJ_T0096185.1 MGP_LPJ_G0035715.1 mouse_genomes_project X 70485304 70495226 - MGP_LPJ_P0096185 Renbp protein_coding protein_coding MGP_LPJ_T0096186.1 MGP_LPJ_G0035715.1 mouse_genomes_project X 70485304 70495168 - MGP_LPJ_P0096186 Renbp protein_coding protein_coding MGP_LPJ_T0096187.1 MGP_LPJ_G0035715.1 mouse_genomes_project X 70485305 70489581 - Renbp protein_coding retained_intron MGP_LPJ_T0096188.1 MGP_LPJ_G0035715.1 mouse_genomes_project X 70485306 70495193 - Renbp protein_coding retained_intron MGP_LPJ_T0096189.1 MGP_LPJ_G0035715.1 mouse_genomes_project X 70485322 70495132 - MGP_LPJ_P0096189 Renbp protein_coding protein_coding MGP_LPJ_T0096190.1 MGP_LPJ_G0035715.1 mouse_genomes_project X 70488442 70493505 - Renbp protein_coding processed_transcript MGP_LPJ_T0096191.1 MGP_LPJ_G0035715.1 mouse_genomes_project X 70489446 70492453 - Renbp protein_coding retained_intron MGP_LPJ_T0096192.1 MGP_LPJ_G0035715.1 mouse_genomes_project X 70492611 70495117 - Renbp protein_coding retained_intron MGP_LPJ_T0096193.1 MGP_LPJ_G0035715.1 mouse_genomes_project X 70493517 70495121 - MGP_LPJ_P0096193 Renbp protein_coding nonsense_mediated_decay MGP_LPJ_T0096194.1 MGP_LPJ_G0035715.1 mouse_genomes_project X 70493964 70495128 - Renbp protein_coding retained_intron MGP_LPJ_T0016722.1 MGP_LPJ_G0014813.1 mouse_genomes_project X 137166359 137169008 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095748.1 MGP_LPJ_G0035578.1 mouse_genomes_project X 43671656 43709013 - MGP_LPJ_P0095748 Zdhhc9 protein_coding protein_coding MGP_LPJ_T0095749.1 MGP_LPJ_G0035578.1 mouse_genomes_project X 43671656 43708822 - MGP_LPJ_P0095749 Zdhhc9 protein_coding protein_coding MGP_LPJ_T0095750.1 MGP_LPJ_G0035578.1 mouse_genomes_project X 43681055 43708800 - Zdhhc9 protein_coding retained_intron MGP_LPJ_T0095751.1 MGP_LPJ_G0035578.1 mouse_genomes_project X 43690170 43708737 - Zdhhc9 protein_coding retained_intron MGP_LPJ_T0095752.1 MGP_LPJ_G0035578.1 mouse_genomes_project X 43701856 43708463 - Zdhhc9 protein_coding processed_transcript MGP_LPJ_T0095753.1 MGP_LPJ_G0035578.1 mouse_genomes_project X 43706802 43708793 - Zdhhc9 protein_coding processed_transcript MGP_LPJ_T0097859.1 MGP_LPJ_G0036172.1 mouse_genomes_project X 168469113 168480194 - MGP_LPJ_P0097859 Amelx protein_coding protein_coding MGP_LPJ_T0097860.1 MGP_LPJ_G0036172.1 mouse_genomes_project X 168473021 168480194 - Amelx protein_coding processed_transcript MGP_LPJ_T0097861.1 MGP_LPJ_G0036172.1 mouse_genomes_project X 168473021 168480194 - MGP_LPJ_P0097861 Amelx protein_coding protein_coding MGP_LPJ_T0097862.1 MGP_LPJ_G0036172.1 mouse_genomes_project X 168473021 168480194 - MGP_LPJ_P0097862 Amelx protein_coding protein_coding MGP_LPJ_T0097863.1 MGP_LPJ_G0036172.1 mouse_genomes_project X 168473021 168480194 - MGP_LPJ_P0097863 Amelx protein_coding protein_coding MGP_LPJ_T0016762.1 MGP_LPJ_G0014853.1 mouse_genomes_project X 143075188 143076315 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016161.1 MGP_LPJ_G0014252.1 mouse_genomes_project X 5847705 5848262 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016168.1 MGP_LPJ_G0014259.1 mouse_genomes_project X 6964651 6964881 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011795.1 MGP_LPJ_G0009913.1 mouse_genomes_project X 143336923 143337245 + Gm26024 misc_RNA misc_RNA MGP_LPJ_T0096922.1 MGP_LPJ_G0035905.1 mouse_genomes_project X 104336979 104370627 - MGP_LPJ_P0096922 Cysltr1 protein_coding protein_coding MGP_LPJ_T0096923.1 MGP_LPJ_G0035905.1 mouse_genomes_project X 104340350 104343392 - MGP_LPJ_P0096923 Cysltr1 protein_coding protein_coding MGP_LPJ_T0095862.1 MGP_LPJ_G0035619.1 mouse_genomes_project X 49402229 49417124 - MGP_LPJ_P0095862 1700013H16Rik protein_coding protein_coding MGP_LPJ_T0095754.1 MGP_LPJ_G0035579.1 mouse_genomes_project X 43759181 43786056 + MGP_LPJ_P0095754 Utp14a protein_coding protein_coding MGP_LPJ_T0095755.1 MGP_LPJ_G0035579.1 mouse_genomes_project X 43759216 43771575 + Utp14a protein_coding processed_transcript MGP_LPJ_T0095756.1 MGP_LPJ_G0035579.1 mouse_genomes_project X 43759237 43776691 + Utp14a protein_coding processed_transcript MGP_LPJ_T0016386.1 MGP_LPJ_G0014477.1 mouse_genomes_project X 71235569 71238022 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016229.1 MGP_LPJ_G0014320.1 mouse_genomes_project X 34127713 34128007 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097116.1 MGP_LPJ_G0035973.1 mouse_genomes_project X 132654413 132667371 - MGP_LPJ_P0097116 Gla protein_coding protein_coding MGP_LPJ_T0097117.1 MGP_LPJ_G0035973.1 mouse_genomes_project X 132661535 132666538 - MGP_LPJ_P0097117 Gla protein_coding protein_coding MGP_LPJ_T0016584.1 MGP_LPJ_G0014675.1 mouse_genomes_project X 105066424 105067372 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101147.1 MGP_LPJ_G0039410.1 mouse_genomes_project X 1826981 1827057 + Gm26401 snoRNA snoRNA MGP_LPJ_T0095819.1 MGP_LPJ_G0035599.1 mouse_genomes_project X 46498077 46512250 - MGP_LPJ_P0095819 Rap2c protein_coding protein_coding MGP_LPJ_T0095917.1 MGP_LPJ_G0035637.1 mouse_genomes_project X 53296115 53307071 - MGP_LPJ_P0095917 Rbmx protein_coding nonsense_mediated_decay MGP_LPJ_T0095918.1 MGP_LPJ_G0035637.1 mouse_genomes_project X 53298615 53307126 - MGP_LPJ_P0095918 Rbmx protein_coding protein_coding MGP_LPJ_T0095919.1 MGP_LPJ_G0035637.1 mouse_genomes_project X 53299668 53307035 - MGP_LPJ_P0095919 Rbmx protein_coding protein_coding MGP_LPJ_T0095920.1 MGP_LPJ_G0035637.1 mouse_genomes_project X 53302734 53306887 - MGP_LPJ_P0095920 Rbmx protein_coding protein_coding MGP_LPJ_T0097690.1 MGP_LPJ_G0036127.1 mouse_genomes_project X 159731330 159830645 - MGP_LPJ_P0097690 Ppef1 protein_coding protein_coding MGP_LPJ_T0097691.1 MGP_LPJ_G0036127.1 mouse_genomes_project X 159750527 159841519 - MGP_LPJ_P0097691 Ppef1 protein_coding protein_coding MGP_LPJ_T0097692.1 MGP_LPJ_G0036127.1 mouse_genomes_project X 159805186 159830609 - MGP_LPJ_P0097692 Ppef1 protein_coding protein_coding MGP_LPJ_T0096836.1 MGP_LPJ_G0035875.1 mouse_genomes_project X 100414569 100421548 - MGP_LPJ_P0096836 protein_coding protein_coding MGP_LPJ_T0096839.1 MGP_LPJ_G0035875.1 mouse_genomes_project X 100418594 100420288 - MGP_LPJ_P0096839 protein_coding protein_coding MGP_LPJ_T0016239.1 MGP_LPJ_G0014330.1 mouse_genomes_project X 35373953 35375405 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097578.1 MGP_LPJ_G0036096.1 mouse_genomes_project X 152394319 152397702 + MGP_LPJ_P0097578 Ubqln2 protein_coding protein_coding MGP_LPJ_T0016596.1 MGP_LPJ_G0014687.1 mouse_genomes_project X 108298029 108299173 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097616.1 MGP_LPJ_G0036113.1 mouse_genomes_project X 156591919 156626060 - Mbtps2 protein_coding processed_transcript MGP_LPJ_T0097617.1 MGP_LPJ_G0036113.1 mouse_genomes_project X 156604424 156658788 - MGP_LPJ_P0097617 Mbtps2 protein_coding protein_coding MGP_LPJ_T0097618.1 MGP_LPJ_G0036113.1 mouse_genomes_project X 156623000 156658723 - MGP_LPJ_P0097618 Mbtps2 protein_coding protein_coding MGP_LPJ_T0097619.1 MGP_LPJ_G0036113.1 mouse_genomes_project X 156623001 156658723 - MGP_LPJ_P0097619 Mbtps2 protein_coding protein_coding MGP_LPJ_T0097621.1 MGP_LPJ_G0036113.1 mouse_genomes_project X 156626120 156637437 - Mbtps2 protein_coding processed_transcript MGP_LPJ_T0097622.1 MGP_LPJ_G0036113.1 mouse_genomes_project X 156627853 156658724 - Mbtps2 protein_coding retained_intron MGP_LPJ_T0097623.1 MGP_LPJ_G0036113.1 mouse_genomes_project X 156629570 156658752 - MGP_LPJ_P0097623 Mbtps2 protein_coding protein_coding MGP_LPJ_T0097624.1 MGP_LPJ_G0036113.1 mouse_genomes_project X 156651360 156658716 - Mbtps2 protein_coding retained_intron MGP_LPJ_T0016530.1 MGP_LPJ_G0014621.1 mouse_genomes_project X 99191566 99192092 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011139.1 MGP_LPJ_G0009257.1 mouse_genomes_project X 7890750 7890844 - Gm25063 miRNA miRNA MGP_LPJ_T0016483.1 MGP_LPJ_G0014574.1 mouse_genomes_project X 91148828 91150107 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016741.1 MGP_LPJ_G0014832.1 mouse_genomes_project X 140306606 140306862 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016535.1 MGP_LPJ_G0014626.1 mouse_genomes_project X 99712815 99713172 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097703.1 MGP_LPJ_G0036131.1 mouse_genomes_project X 160276616 160412092 + MGP_LPJ_P0097703 Scml2 protein_coding protein_coding MGP_LPJ_T0097704.1 MGP_LPJ_G0036131.1 mouse_genomes_project X 160276616 160412106 + MGP_LPJ_P0097704 Scml2 protein_coding protein_coding MGP_LPJ_T0097705.1 MGP_LPJ_G0036131.1 mouse_genomes_project X 160296663 160412158 + MGP_LPJ_P0097705 Scml2 protein_coding protein_coding MGP_LPJ_T0097706.1 MGP_LPJ_G0036131.1 mouse_genomes_project X 160296685 160413502 + MGP_LPJ_P0097706 Scml2 protein_coding protein_coding MGP_LPJ_T0097707.1 MGP_LPJ_G0036131.1 mouse_genomes_project X 160296685 160413485 + MGP_LPJ_P0097707 Scml2 protein_coding protein_coding MGP_LPJ_T0097708.1 MGP_LPJ_G0036131.1 mouse_genomes_project X 160296973 160410891 + MGP_LPJ_P0097708 Scml2 protein_coding protein_coding MGP_LPJ_T0097709.1 MGP_LPJ_G0036131.1 mouse_genomes_project X 160386936 160393877 + Scml2 protein_coding processed_transcript MGP_LPJ_T0097241.1 MGP_LPJ_G0036017.1 mouse_genomes_project X 135544165 135548779 - MGP_LPJ_P0097241 Esx1 protein_coding protein_coding MGP_LPJ_T0097242.1 MGP_LPJ_G0036017.1 mouse_genomes_project X 135544165 135548624 - MGP_LPJ_P0097242 Esx1 protein_coding protein_coding MGP_LPJ_T0097243.1 MGP_LPJ_G0036017.1 mouse_genomes_project X 135547034 135551006 - MGP_LPJ_P0097243 Esx1 protein_coding protein_coding MGP_LPJ_T0095531.1 MGP_LPJ_G0035501.1 mouse_genomes_project X 16935932 16937590 - MGP_LPJ_P0095531 Gm28269 protein_coding protein_coding MGP_LPJ_T0095333.1 MGP_LPJ_G0035432.1 mouse_genomes_project X 2950578 2952335 + MGP_LPJ_P0095333 Slc38a5 protein_coding protein_coding MGP_LPJ_T0095334.1 MGP_LPJ_G0035432.1 mouse_genomes_project X 2950596 2959574 + MGP_LPJ_P0095334 Slc38a5 protein_coding protein_coding MGP_LPJ_T0095335.1 MGP_LPJ_G0035432.1 mouse_genomes_project X 2950823 2959574 + MGP_LPJ_P0095335 Slc38a5 protein_coding protein_coding MGP_LPJ_T0095336.1 MGP_LPJ_G0035432.1 mouse_genomes_project X 2951090 2959569 + MGP_LPJ_P0095336 Slc38a5 protein_coding protein_coding MGP_LPJ_T0016408.1 MGP_LPJ_G0014499.1 mouse_genomes_project X 75114266 75114786 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016365.1 MGP_LPJ_G0014456.1 mouse_genomes_project X 66857104 66858052 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011212.1 MGP_LPJ_G0009330.1 mouse_genomes_project X 99760311 99760407 - Gm26318 miRNA miRNA MGP_LPJ_T0096719.1 MGP_LPJ_G0035847.1 mouse_genomes_project X 98528059 98534522 - Slc7a3 protein_coding retained_intron MGP_LPJ_T0096720.1 MGP_LPJ_G0035847.1 mouse_genomes_project X 98528070 98534469 - MGP_LPJ_P0096720 Slc7a3 protein_coding protein_coding MGP_LPJ_T0096721.1 MGP_LPJ_G0035847.1 mouse_genomes_project X 98528071 98535143 - MGP_LPJ_P0096721 Slc7a3 protein_coding protein_coding MGP_LPJ_T0096722.1 MGP_LPJ_G0035847.1 mouse_genomes_project X 98528071 98534489 - MGP_LPJ_P0096722 Slc7a3 protein_coding protein_coding MGP_LPJ_T0096723.1 MGP_LPJ_G0035847.1 mouse_genomes_project X 98528655 98533027 - Slc7a3 protein_coding processed_transcript MGP_LPJ_T0096724.1 MGP_LPJ_G0035847.1 mouse_genomes_project X 98530419 98531083 - Slc7a3 protein_coding retained_intron MGP_LPJ_T0096725.1 MGP_LPJ_G0035847.1 mouse_genomes_project X 98530607 98531309 - Slc7a3 protein_coding retained_intron MGP_LPJ_T0011174.1 MGP_LPJ_G0009292.1 mouse_genomes_project X 63138337 63138399 - Mir743 miRNA miRNA MGP_LPJ_T0016454.1 MGP_LPJ_G0014545.1 mouse_genomes_project X 85990312 85990585 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005629.1 MGP_LPJ_G0004745.1 mouse_genomes_project X 140132155 140133481 + Gm15295 antisense antisense MGP_LPJ_T0016427.1 MGP_LPJ_G0014518.1 mouse_genomes_project X 79229655 79230805 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097150.1 MGP_LPJ_G0035981.1 mouse_genomes_project X 133080888 133126915 - MGP_LPJ_P0097150 Zmat1 protein_coding protein_coding MGP_LPJ_T0097151.1 MGP_LPJ_G0035981.1 mouse_genomes_project X 133080891 133126939 - MGP_LPJ_P0097151 Zmat1 protein_coding protein_coding MGP_LPJ_T0097152.1 MGP_LPJ_G0035981.1 mouse_genomes_project X 133082293 133087849 - Zmat1 protein_coding retained_intron MGP_LPJ_T0097024.1 MGP_LPJ_G0035943.1 mouse_genomes_project X 117666539 117669509 + MGP_LPJ_P0097024 Pabpc5 protein_coding protein_coding MGP_LPJ_T0097025.1 MGP_LPJ_G0035943.1 mouse_genomes_project X 117666568 117669353 + MGP_LPJ_P0097025 Pabpc5 protein_coding protein_coding MGP_LPJ_T0097185.1 MGP_LPJ_G0035997.1 mouse_genomes_project X 134358833 134372622 - MGP_LPJ_P0097185 Nxf3 protein_coding protein_coding MGP_LPJ_T0097186.1 MGP_LPJ_G0035997.1 mouse_genomes_project X 134366345 134372609 - MGP_LPJ_P0097186 Nxf3 protein_coding protein_coding MGP_LPJ_T0016263.1 MGP_LPJ_G0014354.1 mouse_genomes_project X 40881103 40882129 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097100.1 MGP_LPJ_G0035968.1 mouse_genomes_project X 132514387 132530793 - MGP_LPJ_P0097100 Taf7l protein_coding protein_coding MGP_LPJ_T0097101.1 MGP_LPJ_G0035968.1 mouse_genomes_project X 132514827 132529297 - MGP_LPJ_P0097101 Taf7l protein_coding protein_coding MGP_LPJ_T0097102.1 MGP_LPJ_G0035968.1 mouse_genomes_project X 132524140 132529292 - Taf7l protein_coding processed_transcript MGP_LPJ_T0016748.1 MGP_LPJ_G0014839.1 mouse_genomes_project X 140882310 140882524 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099886.1 MGP_LPJ_G0038149.1 mouse_genomes_project X 31681499 31681597 - Gm22364 snRNA snRNA MGP_LPJ_T0016321.1 MGP_LPJ_G0014412.1 mouse_genomes_project X 56872758 56873214 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101167.1 MGP_LPJ_G0039430.1 mouse_genomes_project X 72557192 72557319 + Gm23320 snoRNA snoRNA MGP_LPJ_T0095369.1 MGP_LPJ_G0035453.1 mouse_genomes_project X 5009181 5165997 - MGP_LPJ_P0095369 Rpgr protein_coding protein_coding MGP_LPJ_T0095370.1 MGP_LPJ_G0035453.1 mouse_genomes_project X 5103133 5165997 - MGP_LPJ_P0095370 Rpgr protein_coding protein_coding MGP_LPJ_T0095371.1 MGP_LPJ_G0035453.1 mouse_genomes_project X 5103591 5165770 - MGP_LPJ_P0095371 Rpgr protein_coding protein_coding MGP_LPJ_T0095372.1 MGP_LPJ_G0035453.1 mouse_genomes_project X 5105383 5165997 - MGP_LPJ_P0095372 Rpgr protein_coding protein_coding MGP_LPJ_T0095373.1 MGP_LPJ_G0035453.1 mouse_genomes_project X 5127413 5165835 - Rpgr protein_coding retained_intron MGP_LPJ_T0095374.1 MGP_LPJ_G0035453.1 mouse_genomes_project X 5156153 5165810 - Rpgr protein_coding retained_intron MGP_LPJ_T0095375.1 MGP_LPJ_G0035453.1 mouse_genomes_project X 5162639 5165559 - Rpgr protein_coding processed_transcript MGP_LPJ_T0097758.1 MGP_LPJ_G0036144.1 mouse_genomes_project X 163197188 163246602 - MGP_LPJ_P0097758 Car5b protein_coding protein_coding MGP_LPJ_T0097759.1 MGP_LPJ_G0036144.1 mouse_genomes_project X 163231637 163246586 - Car5b protein_coding retained_intron MGP_LPJ_T0011173.1 MGP_LPJ_G0009291.1 mouse_genomes_project X 57129193 57129286 + Gm24396 miRNA miRNA MGP_LPJ_T0097590.1 MGP_LPJ_G0036101.1 mouse_genomes_project X 153267084 153271252 - MGP_LPJ_P0097590 4930524N10Rik protein_coding protein_coding MGP_LPJ_T0097763.1 MGP_LPJ_G0036146.1 mouse_genomes_project X 163301753 163332628 + MGP_LPJ_P0097763 Tmem27 protein_coding protein_coding MGP_LPJ_T0097764.1 MGP_LPJ_G0036146.1 mouse_genomes_project X 163303104 163332627 + MGP_LPJ_P0097764 Tmem27 protein_coding protein_coding MGP_LPJ_T0097765.1 MGP_LPJ_G0036146.1 mouse_genomes_project X 163305102 163331982 + MGP_LPJ_P0097765 Tmem27 protein_coding protein_coding MGP_LPJ_T0102528.1 MGP_LPJ_G0040564.1 mouse_genomes_project X 153581189 153586195 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0099882.1 MGP_LPJ_G0038145.1 mouse_genomes_project X 15949477 15949582 - Gm26065 snRNA snRNA MGP_LPJ_T0016623.1 MGP_LPJ_G0014714.1 mouse_genomes_project X 113087922 113088555 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096810.1 MGP_LPJ_G0035866.1 mouse_genomes_project X 99615658 99625840 + MGP_LPJ_P0096810 Pin4 protein_coding protein_coding MGP_LPJ_T0096811.1 MGP_LPJ_G0035866.1 mouse_genomes_project X 99615780 99625837 + Pin4 protein_coding processed_transcript MGP_LPJ_T0101197.1 MGP_LPJ_G0039460.1 mouse_genomes_project X 149594863 149594991 - Gm24907 snoRNA snoRNA MGP_LPJ_T0016256.1 MGP_LPJ_G0014347.1 mouse_genomes_project X 39101265 39101983 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095939.1 MGP_LPJ_G0035644.1 mouse_genomes_project X 56004495 56128295 - MGP_LPJ_P0095939 Mcf2 protein_coding protein_coding MGP_LPJ_T0095940.1 MGP_LPJ_G0035644.1 mouse_genomes_project X 56004495 56093532 - MGP_LPJ_P0095940 Mcf2 protein_coding protein_coding MGP_LPJ_T0095941.1 MGP_LPJ_G0035644.1 mouse_genomes_project X 56004498 56093475 - MGP_LPJ_P0095941 Mcf2 protein_coding protein_coding MGP_LPJ_T0011182.1 MGP_LPJ_G0009300.1 mouse_genomes_project X 63161665 63161743 - Mir880 miRNA miRNA MGP_LPJ_T0016871.1 MGP_LPJ_G0014962.1 mouse_genomes_project X 166687943 166688486 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011151.1 MGP_LPJ_G0009269.1 mouse_genomes_project X 37049059 37049144 + Gm22413 miRNA miRNA MGP_LPJ_T0016832.1 MGP_LPJ_G0014923.1 mouse_genomes_project X 157887051 157887936 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011154.1 MGP_LPJ_G0009272.1 mouse_genomes_project X 47903749 47903810 - Mir6384 miRNA miRNA MGP_LPJ_T0016327.1 MGP_LPJ_G0014418.1 mouse_genomes_project X 57619845 57620423 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097575.1 MGP_LPJ_G0036095.1 mouse_genomes_project X 152115749 152258885 + MGP_LPJ_P0097575 Klf8 protein_coding protein_coding MGP_LPJ_T0097576.1 MGP_LPJ_G0036095.1 mouse_genomes_project X 152116031 152288364 + MGP_LPJ_P0097576 Klf8 protein_coding protein_coding MGP_LPJ_T0097577.1 MGP_LPJ_G0036095.1 mouse_genomes_project X 152246004 152288029 + MGP_LPJ_P0097577 Klf8 protein_coding protein_coding MGP_LPJ_T0016709.1 MGP_LPJ_G0014800.1 mouse_genomes_project X 135307767 135308185 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097031.1 MGP_LPJ_G0035945.1 mouse_genomes_project X 118066364 118066952 - MGP_LPJ_P0097031 H2afb3 protein_coding protein_coding MGP_LPJ_T0096865.1 MGP_LPJ_G0035892.1 mouse_genomes_project X 102565158 102567474 - MGP_LPJ_P0096865 Magee2 protein_coding protein_coding MGP_LPJ_T0096477.1 MGP_LPJ_G0035775.1 mouse_genomes_project X 75438835 75440474 + MGP_LPJ_P0096477 Fam47c protein_coding protein_coding MGP_LPJ_T0096864.1 MGP_LPJ_G0035891.1 mouse_genomes_project X 102238985 102373445 - MGP_LPJ_P0096864 Zdhhc15 protein_coding protein_coding MGP_LPJ_T0097677.1 MGP_LPJ_G0036125.1 mouse_genomes_project X 159497564 159569165 + Adgrg2 protein_coding retained_intron MGP_LPJ_T0097678.1 MGP_LPJ_G0036125.1 mouse_genomes_project X 159497564 159578203 + MGP_LPJ_P0097678 Adgrg2 protein_coding protein_coding MGP_LPJ_T0097679.1 MGP_LPJ_G0036125.1 mouse_genomes_project X 159525604 159606186 + MGP_LPJ_P0097679 Adgrg2 protein_coding protein_coding MGP_LPJ_T0097680.1 MGP_LPJ_G0036125.1 mouse_genomes_project X 159525604 159606186 + MGP_LPJ_P0097680 Adgrg2 protein_coding protein_coding MGP_LPJ_T0016785.1 MGP_LPJ_G0014876.1 mouse_genomes_project X 149734266 149735806 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016569.1 MGP_LPJ_G0014660.1 mouse_genomes_project X 103054609 103055346 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098349.1 MGP_LPJ_G0036630.1 mouse_genomes_project X 65360895 65361016 - n-R5s7 rRNA rRNA MGP_LPJ_T0016456.1 MGP_LPJ_G0014547.1 mouse_genomes_project X 86073296 86074255 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095345.1 MGP_LPJ_G0035440.1 mouse_genomes_project X 3302724 3306302 - MGP_LPJ_P0095345 protein_coding protein_coding MGP_LPJ_T0099922.1 MGP_LPJ_G0038185.1 mouse_genomes_project X 108391723 108391914 - Gm26108 snRNA snRNA MGP_LPJ_T0016185.1 MGP_LPJ_G0014276.1 mouse_genomes_project X 10663864 10664201 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096032.1 MGP_LPJ_G0035676.1 mouse_genomes_project X 68360736 68391817 + protein_coding processed_transcript MGP_LPJ_T0016699.1 MGP_LPJ_G0014790.1 mouse_genomes_project X 134007085 134008906 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095401.1 MGP_LPJ_G0035461.1 mouse_genomes_project X 8103503 8158438 + MGP_LPJ_P0095401 Usp9x protein_coding protein_coding MGP_LPJ_T0095402.1 MGP_LPJ_G0035461.1 mouse_genomes_project X 8103519 8157150 + Usp9x protein_coding retained_intron MGP_LPJ_T0095403.1 MGP_LPJ_G0035461.1 mouse_genomes_project X 8103519 8212228 + MGP_LPJ_P0095403 Usp9x protein_coding protein_coding MGP_LPJ_T0095404.1 MGP_LPJ_G0035461.1 mouse_genomes_project X 8147698 8158222 + MGP_LPJ_P0095404 Usp9x protein_coding protein_coding MGP_LPJ_T0095405.1 MGP_LPJ_G0035461.1 mouse_genomes_project X 8164008 8168690 + Usp9x protein_coding retained_intron MGP_LPJ_T0095406.1 MGP_LPJ_G0035461.1 mouse_genomes_project X 8164275 8169902 + Usp9x protein_coding retained_intron MGP_LPJ_T0095407.1 MGP_LPJ_G0035461.1 mouse_genomes_project X 8196952 8208113 + MGP_LPJ_P0095407 Usp9x protein_coding protein_coding MGP_LPJ_T0016745.1 MGP_LPJ_G0014836.1 mouse_genomes_project X 140657562 140658504 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011204.1 MGP_LPJ_G0009322.1 mouse_genomes_project X 75609982 75610074 - Gm23556 miRNA miRNA MGP_LPJ_T0016520.1 MGP_LPJ_G0014611.1 mouse_genomes_project X 97246810 97248003 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016446.1 MGP_LPJ_G0014537.1 mouse_genomes_project X 84988271 84988807 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016258.1 MGP_LPJ_G0014349.1 mouse_genomes_project X 39704967 39705415 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099933.1 MGP_LPJ_G0038196.1 mouse_genomes_project X 136852733 136852838 - Gm23958 snRNA snRNA MGP_LPJ_T0095856.1 MGP_LPJ_G0035614.1 mouse_genomes_project X 49170328 49247191 - MGP_LPJ_P0095856 Gm14597 protein_coding protein_coding MGP_LPJ_T0095857.1 MGP_LPJ_G0035614.1 mouse_genomes_project X 49170328 49173207 - MGP_LPJ_P0095857 Gm14597 protein_coding protein_coding MGP_LPJ_T0016757.1 MGP_LPJ_G0014848.1 mouse_genomes_project X 142753929 142754085 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096903.1 MGP_LPJ_G0035899.1 mouse_genomes_project X 103753561 103760254 + MGP_LPJ_P0096903 Cox7b protein_coding protein_coding MGP_LPJ_T0096904.1 MGP_LPJ_G0035899.1 mouse_genomes_project X 103753577 103753991 + Cox7b protein_coding processed_transcript MGP_LPJ_T0096905.1 MGP_LPJ_G0035899.1 mouse_genomes_project X 103757194 103759762 + Cox7b protein_coding retained_intron MGP_LPJ_T0095559.1 MGP_LPJ_G0035511.1 mouse_genomes_project X 31695431 31701901 - Gm14569 protein_coding processed_transcript MGP_LPJ_T0095560.1 MGP_LPJ_G0035511.1 mouse_genomes_project X 31695431 31698511 - Gm14569 protein_coding processed_transcript MGP_LPJ_T0095561.1 MGP_LPJ_G0035511.1 mouse_genomes_project X 31695431 31761366 - MGP_LPJ_P0095561 Gm14569 protein_coding protein_coding MGP_LPJ_T0095562.1 MGP_LPJ_G0035511.1 mouse_genomes_project X 31711042 31753918 - Gm14569 protein_coding processed_transcript MGP_LPJ_T0095724.1 MGP_LPJ_G0035571.1 mouse_genomes_project X 40481409 40483297 + MGP_LPJ_P0095724 Prr32 protein_coding protein_coding MGP_LPJ_T0016241.1 MGP_LPJ_G0014332.1 mouse_genomes_project X 36046246 36046806 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016712.1 MGP_LPJ_G0014803.1 mouse_genomes_project X 135526064 135526898 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097390.1 MGP_LPJ_G0036061.1 mouse_genomes_project X 142879474 143204228 - MGP_LPJ_P0097390 Trpc5 protein_coding protein_coding MGP_LPJ_T0097391.1 MGP_LPJ_G0036061.1 mouse_genomes_project X 142920694 143204051 - Trpc5 protein_coding retained_intron MGP_LPJ_T0096340.1 MGP_LPJ_G0035733.1 mouse_genomes_project X 70947563 70951587 - MGP_LPJ_P0096340 Slc10a3 protein_coding protein_coding MGP_LPJ_T0096341.1 MGP_LPJ_G0035733.1 mouse_genomes_project X 70947565 70949355 - MGP_LPJ_P0096341 Slc10a3 protein_coding protein_coding MGP_LPJ_T0096342.1 MGP_LPJ_G0035733.1 mouse_genomes_project X 70947565 70951646 - MGP_LPJ_P0096342 Slc10a3 protein_coding protein_coding MGP_LPJ_T0096343.1 MGP_LPJ_G0035733.1 mouse_genomes_project X 70947565 70951690 - MGP_LPJ_P0096343 Slc10a3 protein_coding protein_coding MGP_LPJ_T0016545.1 MGP_LPJ_G0014636.1 mouse_genomes_project X 100873445 100873964 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011186.1 MGP_LPJ_G0009304.1 mouse_genomes_project X 63175024 63175099 - Mir470 miRNA miRNA MGP_LPJ_T0016132.1 MGP_LPJ_G0014223.1 mouse_genomes_project X 472000 473824 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011150.1 MGP_LPJ_G0009268.1 mouse_genomes_project X 35343570 35343641 - Gm26194 miRNA miRNA MGP_LPJ_T0016831.1 MGP_LPJ_G0014922.1 mouse_genomes_project X 157566237 157566827 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095532.1 MGP_LPJ_G0035502.1 mouse_genomes_project X 18393387 18459918 - MGP_LPJ_P0095532 Klhl13 protein_coding protein_coding MGP_LPJ_T0095533.1 MGP_LPJ_G0035502.1 mouse_genomes_project X 18393395 18460820 - MGP_LPJ_P0095533 Klhl13 protein_coding protein_coding MGP_LPJ_T0095534.1 MGP_LPJ_G0035502.1 mouse_genomes_project X 18393396 18494388 - MGP_LPJ_P0095534 Klhl13 protein_coding protein_coding MGP_LPJ_T0095535.1 MGP_LPJ_G0035502.1 mouse_genomes_project X 18393396 18442287 - MGP_LPJ_P0095535 Klhl13 protein_coding protein_coding MGP_LPJ_T0095536.1 MGP_LPJ_G0035502.1 mouse_genomes_project X 18411595 18472235 - Klhl13 protein_coding processed_transcript MGP_LPJ_T0097766.1 MGP_LPJ_G0036147.1 mouse_genomes_project X 163352714 163405534 + MGP_LPJ_P0097766 Ace2 protein_coding protein_coding MGP_LPJ_T0097767.1 MGP_LPJ_G0036147.1 mouse_genomes_project X 163353860 163405534 + MGP_LPJ_P0097767 Ace2 protein_coding protein_coding MGP_LPJ_T0097768.1 MGP_LPJ_G0036147.1 mouse_genomes_project X 163379335 163402938 + MGP_LPJ_P0097768 Ace2 protein_coding protein_coding MGP_LPJ_T0016575.1 MGP_LPJ_G0014666.1 mouse_genomes_project X 104383073 104383946 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002502.1 MGP_LPJ_G0002408.1 mouse_genomes_project X 69962814 69964070 + TEC TEC MGP_LPJ_T0095530.1 MGP_LPJ_G0035500.1 mouse_genomes_project X 16907366 16934670 + MGP_LPJ_P0095530 Slc6a14 protein_coding protein_coding MGP_LPJ_T0102504.1 MGP_LPJ_G0040540.1 mouse_genomes_project X 83288531 83289563 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0016824.1 MGP_LPJ_G0014915.1 mouse_genomes_project X 156703041 156703637 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096519.1 MGP_LPJ_G0035788.1 mouse_genomes_project X 83146104 83157471 - MGP_LPJ_P0096519 Mageb4 protein_coding protein_coding MGP_LPJ_T0005640.1 MGP_LPJ_G0004751.1 mouse_genomes_project X 159637998 159643565 - Gm15243 antisense antisense MGP_LPJ_T0016312.1 MGP_LPJ_G0014403.1 mouse_genomes_project X 55811948 55813005 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095790.1 MGP_LPJ_G0035588.1 mouse_genomes_project X 44377033 44409488 - MGP_LPJ_P0095790 Gm595 protein_coding protein_coding MGP_LPJ_T0016290.1 MGP_LPJ_G0014381.1 mouse_genomes_project X 49262594 49263154 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096573.1 MGP_LPJ_G0035809.1 mouse_genomes_project X 91581097 91630283 + MGP_LPJ_P0096573 Apoo protein_coding protein_coding MGP_LPJ_T0096574.1 MGP_LPJ_G0035809.1 mouse_genomes_project X 91581097 91629988 + MGP_LPJ_P0096574 Apoo protein_coding protein_coding MGP_LPJ_T0095955.1 MGP_LPJ_G0035652.1 mouse_genomes_project X 60351499 60352291 - MGP_LPJ_P0095955 Gm6760 protein_coding protein_coding MGP_LPJ_T0096377.1 MGP_LPJ_G0035738.1 mouse_genomes_project X 71080555 71081668 - MGP_LPJ_P0096377 protein_coding protein_coding MGP_LPJ_T0016815.1 MGP_LPJ_G0014906.1 mouse_genomes_project X 155692015 155692484 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096582.1 MGP_LPJ_G0035811.1 mouse_genomes_project X 91876905 91879396 + MGP_LPJ_P0096582 Gspt2 protein_coding protein_coding MGP_LPJ_T0096583.1 MGP_LPJ_G0035811.1 mouse_genomes_project X 91876912 91884081 + MGP_LPJ_P0096583 Gspt2 protein_coding nonsense_mediated_decay MGP_LPJ_T0016693.1 MGP_LPJ_G0014784.1 mouse_genomes_project X 132922384 132923290 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095376.1 MGP_LPJ_G0035454.1 mouse_genomes_project X 5202285 5277625 + MGP_LPJ_P0095376 Otc protein_coding protein_coding MGP_LPJ_T0095377.1 MGP_LPJ_G0035454.1 mouse_genomes_project X 5202347 5273832 + MGP_LPJ_P0095377 Otc protein_coding protein_coding MGP_LPJ_T0011216.1 MGP_LPJ_G0009334.1 mouse_genomes_project X 101765101 101765192 + Gm24993 miRNA miRNA MGP_LPJ_T0095950.1 MGP_LPJ_G0035648.1 mouse_genomes_project X 57167088 57169893 - MGP_LPJ_P0095950 Cdr1 protein_coding protein_coding MGP_LPJ_T0016175.1 MGP_LPJ_G0014266.1 mouse_genomes_project X 7970029 7970386 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095631.1 MGP_LPJ_G0035546.1 mouse_genomes_project X 33332772 33370794 - MGP_LPJ_P0095631 protein_coding protein_coding MGP_LPJ_T0102495.1 MGP_LPJ_G0040531.1 mouse_genomes_project X 71464216 71464354 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0101450.1 MGP_LPJ_G0039611.1 mouse_genomes_project X 135183900 135184222 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0016692.1 MGP_LPJ_G0014783.1 mouse_genomes_project X 132837682 132838822 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095892.1 MGP_LPJ_G0035630.1 mouse_genomes_project X 52689556 52714543 - MGP_LPJ_P0095892 Mtap7d3 protein_coding protein_coding MGP_LPJ_T0095893.1 MGP_LPJ_G0035630.1 mouse_genomes_project X 52701883 52714531 - MGP_LPJ_P0095893 Mtap7d3 protein_coding protein_coding MGP_LPJ_T0096520.1 MGP_LPJ_G0035789.1 mouse_genomes_project X 83649862 85070716 - MGP_LPJ_P0096520 Il1rapl1 protein_coding protein_coding MGP_LPJ_T0096521.1 MGP_LPJ_G0035789.1 mouse_genomes_project X 83656205 84837432 - MGP_LPJ_P0096521 Il1rapl1 protein_coding protein_coding MGP_LPJ_T0096522.1 MGP_LPJ_G0035789.1 mouse_genomes_project X 83678562 85070716 - MGP_LPJ_P0096522 Il1rapl1 protein_coding protein_coding MGP_LPJ_T0097724.1 MGP_LPJ_G0036136.1 mouse_genomes_project X 161978955 162013648 - Txlng protein_coding retained_intron MGP_LPJ_T0097725.1 MGP_LPJ_G0036136.1 mouse_genomes_project X 161982073 162031638 - MGP_LPJ_P0097725 Txlng protein_coding protein_coding MGP_LPJ_T0097726.1 MGP_LPJ_G0036136.1 mouse_genomes_project X 161989899 162031752 - MGP_LPJ_P0097726 Txlng protein_coding protein_coding MGP_LPJ_T0097727.1 MGP_LPJ_G0036136.1 mouse_genomes_project X 162030357 162031752 - Txlng protein_coding processed_transcript MGP_LPJ_T0011142.1 MGP_LPJ_G0009260.1 mouse_genomes_project X 14289419 14289514 - Mir221 miRNA miRNA MGP_LPJ_T0016184.1 MGP_LPJ_G0014275.1 mouse_genomes_project X 10661895 10662437 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096453.1 MGP_LPJ_G0035764.1 mouse_genomes_project X 74209585 74370285 + MGP_LPJ_P0096453 Tbl1x protein_coding protein_coding MGP_LPJ_T0096454.1 MGP_LPJ_G0035764.1 mouse_genomes_project X 74209786 74367045 + Tbl1x protein_coding retained_intron MGP_LPJ_T0016713.1 MGP_LPJ_G0014804.1 mouse_genomes_project X 135531149 135532588 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096400.1 MGP_LPJ_G0035746.1 mouse_genomes_project X 71751818 71773032 - MGP_LPJ_P0096400 Mpp1 protein_coding protein_coding MGP_LPJ_T0096401.1 MGP_LPJ_G0035746.1 mouse_genomes_project X 71752733 71772860 - MGP_LPJ_P0096401 Mpp1 protein_coding protein_coding MGP_LPJ_T0096402.1 MGP_LPJ_G0035746.1 mouse_genomes_project X 71753801 71772965 - MGP_LPJ_P0096402 Mpp1 protein_coding protein_coding MGP_LPJ_T0096403.1 MGP_LPJ_G0035746.1 mouse_genomes_project X 71754438 71772870 - MGP_LPJ_P0096403 Mpp1 protein_coding protein_coding MGP_LPJ_T0096404.1 MGP_LPJ_G0035746.1 mouse_genomes_project X 71755650 71772870 - Mpp1 protein_coding processed_transcript MGP_LPJ_T0096405.1 MGP_LPJ_G0035746.1 mouse_genomes_project X 71757920 71759933 - Mpp1 protein_coding retained_intron MGP_LPJ_T0096406.1 MGP_LPJ_G0035746.1 mouse_genomes_project X 71758146 71772870 - MGP_LPJ_P0096406 Mpp1 protein_coding protein_coding MGP_LPJ_T0096407.1 MGP_LPJ_G0035746.1 mouse_genomes_project X 71763824 71772870 - MGP_LPJ_P0096407 Mpp1 protein_coding protein_coding MGP_LPJ_T0096408.1 MGP_LPJ_G0035746.1 mouse_genomes_project X 71765012 71773002 - Mpp1 protein_coding retained_intron MGP_LPJ_T0096409.1 MGP_LPJ_G0035746.1 mouse_genomes_project X 71767835 71772969 - MGP_LPJ_P0096409 Mpp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0016291.1 MGP_LPJ_G0014382.1 mouse_genomes_project X 49274361 49274991 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096229.1 MGP_LPJ_G0035719.1 mouse_genomes_project X 70699877 70724746 + MGP_LPJ_P0096229 Opn1mw protein_coding protein_coding MGP_LPJ_T0096230.1 MGP_LPJ_G0035719.1 mouse_genomes_project X 70699879 70724737 + MGP_LPJ_P0096230 Opn1mw protein_coding protein_coding MGP_LPJ_T0096231.1 MGP_LPJ_G0035719.1 mouse_genomes_project X 70699894 70717221 + Opn1mw protein_coding processed_transcript MGP_LPJ_T0096232.1 MGP_LPJ_G0035719.1 mouse_genomes_project X 70711570 70724742 + Opn1mw protein_coding processed_transcript MGP_LPJ_T0096233.1 MGP_LPJ_G0035719.1 mouse_genomes_project X 70711591 70713534 + Opn1mw protein_coding processed_transcript MGP_LPJ_T0096234.1 MGP_LPJ_G0035719.1 mouse_genomes_project X 70712088 70724742 + MGP_LPJ_P0096234 Opn1mw protein_coding protein_coding MGP_LPJ_T0016279.1 MGP_LPJ_G0014370.1 mouse_genomes_project X 45864981 45865861 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016826.1 MGP_LPJ_G0014917.1 mouse_genomes_project X 156720678 156720899 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011786.1 MGP_LPJ_G0009904.1 mouse_genomes_project X 125264686 125264961 + Gm22636 misc_RNA misc_RNA MGP_LPJ_T0095900.1 MGP_LPJ_G0035632.1 mouse_genomes_project X 52944456 52950141 + MGP_LPJ_P0095900 Brs3 protein_coding protein_coding MGP_LPJ_T0016308.1 MGP_LPJ_G0014399.1 mouse_genomes_project X 54541177 54542066 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097807.1 MGP_LPJ_G0036159.1 mouse_genomes_project X 165476013 165637827 + MGP_LPJ_P0097807 Gpm6b protein_coding protein_coding MGP_LPJ_T0097808.1 MGP_LPJ_G0036159.1 mouse_genomes_project X 165476074 165637827 + MGP_LPJ_P0097808 Gpm6b protein_coding protein_coding MGP_LPJ_T0097809.1 MGP_LPJ_G0036159.1 mouse_genomes_project X 165476074 165637827 + MGP_LPJ_P0097809 Gpm6b protein_coding protein_coding MGP_LPJ_T0097810.1 MGP_LPJ_G0036159.1 mouse_genomes_project X 165591563 165637827 + MGP_LPJ_P0097810 Gpm6b protein_coding protein_coding MGP_LPJ_T0097811.1 MGP_LPJ_G0036159.1 mouse_genomes_project X 165591563 165637827 + MGP_LPJ_P0097811 Gpm6b protein_coding protein_coding MGP_LPJ_T0097812.1 MGP_LPJ_G0036159.1 mouse_genomes_project X 165591563 165632840 + MGP_LPJ_P0097812 Gpm6b protein_coding nonsense_mediated_decay MGP_LPJ_T0097813.1 MGP_LPJ_G0036159.1 mouse_genomes_project X 165591563 165632840 + MGP_LPJ_P0097813 Gpm6b protein_coding nonsense_mediated_decay MGP_LPJ_T0097814.1 MGP_LPJ_G0036159.1 mouse_genomes_project X 165591563 165637827 + MGP_LPJ_P0097814 Gpm6b protein_coding protein_coding MGP_LPJ_T0097815.1 MGP_LPJ_G0036159.1 mouse_genomes_project X 165591563 165637827 + MGP_LPJ_P0097815 Gpm6b protein_coding protein_coding MGP_LPJ_T0097816.1 MGP_LPJ_G0036159.1 mouse_genomes_project X 165591563 165637827 + MGP_LPJ_P0097816 Gpm6b protein_coding protein_coding MGP_LPJ_T0097817.1 MGP_LPJ_G0036159.1 mouse_genomes_project X 165591563 165637827 + MGP_LPJ_P0097817 Gpm6b protein_coding protein_coding MGP_LPJ_T0097818.1 MGP_LPJ_G0036159.1 mouse_genomes_project X 165591713 165622123 + Gpm6b protein_coding retained_intron MGP_LPJ_T0016777.1 MGP_LPJ_G0014868.1 mouse_genomes_project X 145159551 145160028 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101172.1 MGP_LPJ_G0039435.1 mouse_genomes_project X 90305717 90305800 + Gm24123 snoRNA snoRNA MGP_LPJ_T0016565.1 MGP_LPJ_G0014656.1 mouse_genomes_project X 102653317 102654292 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097480.1 MGP_LPJ_G0036076.1 mouse_genomes_project X 149901426 149910873 - MGP_LPJ_P0097480 Tsr2 protein_coding protein_coding MGP_LPJ_T0097481.1 MGP_LPJ_G0036076.1 mouse_genomes_project X 149901427 149910873 - MGP_LPJ_P0097481 Tsr2 protein_coding protein_coding MGP_LPJ_T0097482.1 MGP_LPJ_G0036076.1 mouse_genomes_project X 149903813 149910873 - MGP_LPJ_P0097482 Tsr2 protein_coding nonsense_mediated_decay MGP_LPJ_T0097483.1 MGP_LPJ_G0036076.1 mouse_genomes_project X 149904024 149910853 - Tsr2 protein_coding processed_transcript MGP_LPJ_T0097208.1 MGP_LPJ_G0036008.1 mouse_genomes_project X 135085933 135089430 + MGP_LPJ_P0097208 Tceal1 protein_coding protein_coding MGP_LPJ_T0102521.1 MGP_LPJ_G0040557.1 mouse_genomes_project X 146270126 146272041 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0095666.1 MGP_LPJ_G0035561.1 mouse_genomes_project X 36793952 37012403 + Gria3 protein_coding retained_intron MGP_LPJ_T0095667.1 MGP_LPJ_G0035561.1 mouse_genomes_project X 36794198 37071137 + MGP_LPJ_P0095667 Gria3 protein_coding protein_coding MGP_LPJ_T0095668.1 MGP_LPJ_G0035561.1 mouse_genomes_project X 36800272 37073153 + MGP_LPJ_P0095668 Gria3 protein_coding protein_coding MGP_LPJ_T0095669.1 MGP_LPJ_G0035561.1 mouse_genomes_project X 36800366 37071144 + Gria3 protein_coding retained_intron MGP_LPJ_T0095670.1 MGP_LPJ_G0035561.1 mouse_genomes_project X 36800404 37073150 + MGP_LPJ_P0095670 Gria3 protein_coding nonsense_mediated_decay MGP_LPJ_T0095671.1 MGP_LPJ_G0035561.1 mouse_genomes_project X 36800450 37012858 + Gria3 protein_coding retained_intron MGP_LPJ_T0095672.1 MGP_LPJ_G0035561.1 mouse_genomes_project X 36800533 37067055 + MGP_LPJ_P0095672 Gria3 protein_coding protein_coding MGP_LPJ_T0095673.1 MGP_LPJ_G0035561.1 mouse_genomes_project X 36801708 36881983 + MGP_LPJ_P0095673 Gria3 protein_coding protein_coding MGP_LPJ_T0095674.1 MGP_LPJ_G0035561.1 mouse_genomes_project X 37009500 37020566 + Gria3 protein_coding retained_intron MGP_LPJ_T0097122.1 MGP_LPJ_G0035976.1 mouse_genomes_project X 132793496 132797401 + MGP_LPJ_P0097122 Armcx1 protein_coding protein_coding MGP_LPJ_T0097123.1 MGP_LPJ_G0035976.1 mouse_genomes_project X 132793503 132797410 + MGP_LPJ_P0097123 Armcx1 protein_coding protein_coding MGP_LPJ_T0097124.1 MGP_LPJ_G0035976.1 mouse_genomes_project X 132793521 132794854 + Armcx1 protein_coding processed_transcript MGP_LPJ_T0097125.1 MGP_LPJ_G0035976.1 mouse_genomes_project X 132793521 132797403 + MGP_LPJ_P0097125 Armcx1 protein_coding protein_coding MGP_LPJ_T0097126.1 MGP_LPJ_G0035976.1 mouse_genomes_project X 132793522 132797410 + MGP_LPJ_P0097126 Armcx1 protein_coding protein_coding MGP_LPJ_T0097127.1 MGP_LPJ_G0035976.1 mouse_genomes_project X 132793536 132795048 + Armcx1 protein_coding processed_transcript MGP_LPJ_T0097128.1 MGP_LPJ_G0035976.1 mouse_genomes_project X 132793536 132794569 + Armcx1 protein_coding processed_transcript MGP_LPJ_T0097129.1 MGP_LPJ_G0035976.1 mouse_genomes_project X 132793546 132797401 + MGP_LPJ_P0097129 Armcx1 protein_coding protein_coding MGP_LPJ_T0097130.1 MGP_LPJ_G0035976.1 mouse_genomes_project X 132793553 132797410 + MGP_LPJ_P0097130 Armcx1 protein_coding protein_coding MGP_LPJ_T0097131.1 MGP_LPJ_G0035976.1 mouse_genomes_project X 132794797 132796008 + Armcx1 protein_coding processed_transcript MGP_LPJ_T0095566.1 MGP_LPJ_G0035514.1 mouse_genomes_project X 32014750 32048903 + MGP_LPJ_P0095566 Slc25a43 protein_coding protein_coding MGP_LPJ_T0016636.1 MGP_LPJ_G0014727.1 mouse_genomes_project X 115593442 115593899 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011181.1 MGP_LPJ_G0009299.1 mouse_genomes_project X 63160358 63160433 - Mir463 miRNA miRNA MGP_LPJ_T0016287.1 MGP_LPJ_G0014378.1 mouse_genomes_project X 48426992 48427483 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101153.1 MGP_LPJ_G0039416.1 mouse_genomes_project X 33047016 33047159 - snoRNA snoRNA MGP_LPJ_T0016345.1 MGP_LPJ_G0014436.1 mouse_genomes_project X 62281049 62283177 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096445.1 MGP_LPJ_G0035757.1 mouse_genomes_project X 72986693 72993913 + MGP_LPJ_P0096445 protein_coding protein_coding MGP_LPJ_T0016413.1 MGP_LPJ_G0014504.1 mouse_genomes_project X 75394634 75395618 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097157.1 MGP_LPJ_G0035985.1 mouse_genomes_project X 133642213 133734231 + MGP_LPJ_P0097157 protein_coding protein_coding MGP_LPJ_T0016464.1 MGP_LPJ_G0014555.1 mouse_genomes_project X 87404834 87407240 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005641.1 MGP_LPJ_G0004752.1 mouse_genomes_project X 161078024 161078579 + Gm15202 antisense antisense MGP_LPJ_T0011180.1 MGP_LPJ_G0009298.1 mouse_genomes_project X 63157955 63158026 - Mir741 miRNA miRNA MGP_LPJ_T0016771.1 MGP_LPJ_G0014862.1 mouse_genomes_project X 144484539 144485374 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096630.1 MGP_LPJ_G0035824.1 mouse_genomes_project X 94085063 94088139 + Gpr165 protein_coding retained_intron MGP_LPJ_T0096631.1 MGP_LPJ_G0035824.1 mouse_genomes_project X 94085114 94091007 + MGP_LPJ_P0096631 Gpr165 protein_coding protein_coding MGP_LPJ_T0096632.1 MGP_LPJ_G0035824.1 mouse_genomes_project X 94085135 94087404 + Gpr165 protein_coding retained_intron MGP_LPJ_T0096633.1 MGP_LPJ_G0035824.1 mouse_genomes_project X 94085815 94090901 + Gpr165 protein_coding retained_intron MGP_LPJ_T0101202.1 MGP_LPJ_G0039465.1 mouse_genomes_project X 156480956 156481092 + Gm24281 snoRNA snoRNA MGP_LPJ_T0096757.1 MGP_LPJ_G0035856.1 mouse_genomes_project X 98871850 98888183 - MGP_LPJ_P0096757 Zmym3 protein_coding protein_coding MGP_LPJ_T0096758.1 MGP_LPJ_G0035856.1 mouse_genomes_project X 98871850 98887381 - MGP_LPJ_P0096758 Zmym3 protein_coding protein_coding MGP_LPJ_T0096759.1 MGP_LPJ_G0035856.1 mouse_genomes_project X 98871850 98887265 - MGP_LPJ_P0096759 Zmym3 protein_coding protein_coding MGP_LPJ_T0096760.1 MGP_LPJ_G0035856.1 mouse_genomes_project X 98871850 98888316 - MGP_LPJ_P0096760 Zmym3 protein_coding protein_coding MGP_LPJ_T0096761.1 MGP_LPJ_G0035856.1 mouse_genomes_project X 98873445 98877201 - Zmym3 protein_coding processed_transcript MGP_LPJ_T0096762.1 MGP_LPJ_G0035856.1 mouse_genomes_project X 98880710 98882386 - Zmym3 protein_coding retained_intron MGP_LPJ_T0096763.1 MGP_LPJ_G0035856.1 mouse_genomes_project X 98881667 98884944 - Zmym3 protein_coding processed_transcript MGP_LPJ_T0096764.1 MGP_LPJ_G0035856.1 mouse_genomes_project X 98881975 98882633 - Zmym3 protein_coding retained_intron MGP_LPJ_T0096765.1 MGP_LPJ_G0035856.1 mouse_genomes_project X 98882395 98884843 - Zmym3 protein_coding retained_intron MGP_LPJ_T0096766.1 MGP_LPJ_G0035856.1 mouse_genomes_project X 98882396 98887276 - MGP_LPJ_P0096766 Zmym3 protein_coding protein_coding MGP_LPJ_T0096767.1 MGP_LPJ_G0035856.1 mouse_genomes_project X 98882399 98888152 - MGP_LPJ_P0096767 Zmym3 protein_coding protein_coding MGP_LPJ_T0096768.1 MGP_LPJ_G0035856.1 mouse_genomes_project X 98882399 98887308 - MGP_LPJ_P0096768 Zmym3 protein_coding protein_coding MGP_LPJ_T0096769.1 MGP_LPJ_G0035856.1 mouse_genomes_project X 98882404 98887683 - MGP_LPJ_P0096769 Zmym3 protein_coding protein_coding MGP_LPJ_T0096770.1 MGP_LPJ_G0035856.1 mouse_genomes_project X 98882424 98887831 - MGP_LPJ_P0096770 Zmym3 protein_coding protein_coding MGP_LPJ_T0096771.1 MGP_LPJ_G0035856.1 mouse_genomes_project X 98882481 98884840 - Zmym3 protein_coding retained_intron MGP_LPJ_T0096772.1 MGP_LPJ_G0035856.1 mouse_genomes_project X 98883653 98887296 - Zmym3 protein_coding processed_transcript MGP_LPJ_T0096773.1 MGP_LPJ_G0035856.1 mouse_genomes_project X 98883740 98885157 - Zmym3 protein_coding retained_intron MGP_LPJ_T0096774.1 MGP_LPJ_G0035856.1 mouse_genomes_project X 98883849 98887327 - MGP_LPJ_P0096774 Zmym3 protein_coding protein_coding MGP_LPJ_T0097270.1 MGP_LPJ_G0036027.1 mouse_genomes_project X 138036457 138150296 + MGP_LPJ_P0097270 Rnf128 protein_coding protein_coding MGP_LPJ_T0097271.1 MGP_LPJ_G0036027.1 mouse_genomes_project X 138084570 138150303 + MGP_LPJ_P0097271 Rnf128 protein_coding protein_coding MGP_LPJ_T0097272.1 MGP_LPJ_G0036027.1 mouse_genomes_project X 138085317 138148899 + Rnf128 protein_coding processed_transcript MGP_LPJ_T0011138.1 MGP_LPJ_G0009256.1 mouse_genomes_project X 2448048 2448169 + Mir1198 miRNA miRNA MGP_LPJ_T0095135.1 MGP_LPJ_G0035388.1 mouse_genomes_project X 61218 63586 - MGP_LPJ_P0095135 Mycs protein_coding protein_coding MGP_LPJ_T0016758.1 MGP_LPJ_G0014849.1 mouse_genomes_project X 142778181 142780789 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016406.1 MGP_LPJ_G0014497.1 mouse_genomes_project X 74761915 74762161 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016661.1 MGP_LPJ_G0014752.1 mouse_genomes_project X 120630744 120631473 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099935.1 MGP_LPJ_G0038198.1 mouse_genomes_project X 143672470 143672615 + Gm25097 snRNA snRNA MGP_LPJ_T0009455.1 MGP_LPJ_G0007581.1 mouse_genomes_project X 165877338 165880778 - Gm15226 lincRNA lincRNA MGP_LPJ_T0099872.1 MGP_LPJ_G0038135.1 mouse_genomes_project X 2741577 2741679 + Gm22083 snRNA snRNA MGP_LPJ_T0016142.1 MGP_LPJ_G0014233.1 mouse_genomes_project X 2390213 2390673 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016509.1 MGP_LPJ_G0014600.1 mouse_genomes_project X 94323676 94324211 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097302.1 MGP_LPJ_G0036034.1 mouse_genomes_project X 138549933 138594225 + MGP_LPJ_P0097302 Pih1h3b protein_coding protein_coding MGP_LPJ_T0095835.1 MGP_LPJ_G0035605.1 mouse_genomes_project X 47803123 48149154 - MGP_LPJ_P0095835 Gpc3 protein_coding protein_coding MGP_LPJ_T0095836.1 MGP_LPJ_G0035605.1 mouse_genomes_project X 47914020 48149183 - MGP_LPJ_P0095836 Gpc3 protein_coding protein_coding MGP_LPJ_T0099921.1 MGP_LPJ_G0038184.1 mouse_genomes_project X 106880658 106880765 - Gm25797 snRNA snRNA MGP_LPJ_T0011220.1 MGP_LPJ_G0009338.1 mouse_genomes_project X 110721584 110721654 - Mir361 miRNA miRNA MGP_LPJ_T0005594.1 MGP_LPJ_G0004718.1 mouse_genomes_project X 2696902 2730154 + Gm14820 antisense antisense MGP_LPJ_T0005595.1 MGP_LPJ_G0004718.1 mouse_genomes_project X 2703622 2716283 + Gm14820 antisense antisense MGP_LPJ_T0005596.1 MGP_LPJ_G0004718.1 mouse_genomes_project X 2703698 2730874 + Gm14820 antisense antisense MGP_LPJ_T0005597.1 MGP_LPJ_G0004718.1 mouse_genomes_project X 2703778 2732534 + Gm14820 antisense antisense MGP_LPJ_T0005598.1 MGP_LPJ_G0004718.1 mouse_genomes_project X 2706945 2730871 + Gm14820 antisense antisense MGP_LPJ_T0095451.1 MGP_LPJ_G0035477.1 mouse_genomes_project X 14625773 14627624 - MGP_LPJ_P0095451 BC049702 protein_coding protein_coding MGP_LPJ_T0005607.1 MGP_LPJ_G0004726.1 mouse_genomes_project X 48109420 48154272 + A630012P03Rik antisense antisense MGP_LPJ_T0005608.1 MGP_LPJ_G0004726.1 mouse_genomes_project X 48109420 48154272 + A630012P03Rik antisense antisense MGP_LPJ_T0016790.1 MGP_LPJ_G0014881.1 mouse_genomes_project X 150489964 150490879 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016477.1 MGP_LPJ_G0014568.1 mouse_genomes_project X 89566520 89566696 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095344.1 MGP_LPJ_G0035439.1 mouse_genomes_project X 3259695 3306261 - MGP_LPJ_P0095344 protein_coding protein_coding MGP_LPJ_T0016718.1 MGP_LPJ_G0014809.1 mouse_genomes_project X 135637309 135639254 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097865.1 MGP_LPJ_G0036173.1 mouse_genomes_project X 168547740 168609152 - MGP_LPJ_P0097865 Hccs protein_coding nonsense_mediated_decay MGP_LPJ_T0097866.1 MGP_LPJ_G0036173.1 mouse_genomes_project X 168600309 168609060 - MGP_LPJ_P0097866 Hccs protein_coding protein_coding MGP_LPJ_T0097867.1 MGP_LPJ_G0036173.1 mouse_genomes_project X 168600309 168609074 - MGP_LPJ_P0097867 Hccs protein_coding protein_coding MGP_LPJ_T0016527.1 MGP_LPJ_G0014618.1 mouse_genomes_project X 98698016 98698285 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102512.1 MGP_LPJ_G0040548.1 mouse_genomes_project X 100395920 100398793 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0099877.1 MGP_LPJ_G0038140.1 mouse_genomes_project X 10838761 10838868 - Gm25207 snRNA snRNA MGP_LPJ_T0016299.1 MGP_LPJ_G0014390.1 mouse_genomes_project X 53533233 53533479 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016159.1 MGP_LPJ_G0014250.1 mouse_genomes_project X 5647267 5647712 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101439.1 MGP_LPJ_G0039604.1 mouse_genomes_project X 85990325 85990768 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101440.1 MGP_LPJ_G0039604.1 mouse_genomes_project X 85990378 85990585 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0096388.1 MGP_LPJ_G0035745.1 mouse_genomes_project X 71738044 71751863 + MGP_LPJ_P0096388 Dkc1 protein_coding protein_coding MGP_LPJ_T0096389.1 MGP_LPJ_G0035745.1 mouse_genomes_project X 71738243 71744731 + MGP_LPJ_P0096389 Dkc1 protein_coding protein_coding MGP_LPJ_T0096390.1 MGP_LPJ_G0035745.1 mouse_genomes_project X 71738276 71741078 + MGP_LPJ_P0096390 Dkc1 protein_coding protein_coding MGP_LPJ_T0096391.1 MGP_LPJ_G0035745.1 mouse_genomes_project X 71738289 71740988 + Dkc1 protein_coding retained_intron MGP_LPJ_T0096392.1 MGP_LPJ_G0035745.1 mouse_genomes_project X 71738291 71741138 + Dkc1 protein_coding processed_transcript MGP_LPJ_T0096393.1 MGP_LPJ_G0035745.1 mouse_genomes_project X 71738305 71744653 + MGP_LPJ_P0096393 Dkc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0096394.1 MGP_LPJ_G0035745.1 mouse_genomes_project X 71738736 71741010 + Dkc1 protein_coding retained_intron MGP_LPJ_T0096395.1 MGP_LPJ_G0035745.1 mouse_genomes_project X 71742108 71749296 + Dkc1 protein_coding retained_intron MGP_LPJ_T0096396.1 MGP_LPJ_G0035745.1 mouse_genomes_project X 71742243 71750328 + MGP_LPJ_P0096396 Dkc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0096397.1 MGP_LPJ_G0035745.1 mouse_genomes_project X 71742449 71747803 + Dkc1 protein_coding processed_transcript MGP_LPJ_T0096398.1 MGP_LPJ_G0035745.1 mouse_genomes_project X 71743131 71747851 + Dkc1 protein_coding processed_transcript MGP_LPJ_T0096399.1 MGP_LPJ_G0035745.1 mouse_genomes_project X 71748033 71750361 + Dkc1 protein_coding retained_intron MGP_LPJ_T0011225.1 MGP_LPJ_G0009343.1 mouse_genomes_project X 134048964 134049068 - Mir1970 miRNA miRNA MGP_LPJ_T0018574.1 MGP_LPJ_G0015696.1 mouse_genomes_project X 48283755 48285786 - Kis2 processed_transcript processed_transcript MGP_LPJ_T0018575.1 MGP_LPJ_G0015696.1 mouse_genomes_project X 48283755 48285786 - Kis2 processed_transcript processed_transcript MGP_LPJ_T0018576.1 MGP_LPJ_G0015696.1 mouse_genomes_project X 48283755 48285786 - Kis2 processed_transcript processed_transcript MGP_LPJ_T0018577.1 MGP_LPJ_G0015696.1 mouse_genomes_project X 48283757 48286153 - Kis2 processed_transcript processed_transcript MGP_LPJ_T0016632.1 MGP_LPJ_G0014723.1 mouse_genomes_project X 115239451 115241144 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099901.1 MGP_LPJ_G0038164.1 mouse_genomes_project X 63088478 63088656 + Gm23000 snRNA snRNA MGP_LPJ_T0016562.1 MGP_LPJ_G0014653.1 mouse_genomes_project X 101609839 101611288 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011136.1 MGP_LPJ_G0009254.1 mouse_genomes_project X 1844349 1844417 - Mir188 miRNA miRNA MGP_LPJ_T0002505.1 MGP_LPJ_G0002411.1 mouse_genomes_project X 126248022 126249886 + TEC TEC MGP_LPJ_T0016330.1 MGP_LPJ_G0014421.1 mouse_genomes_project X 58026505 58027495 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097228.1 MGP_LPJ_G0036015.1 mouse_genomes_project X 135412009 135415818 + MGP_LPJ_P0097228 Zcchc18 protein_coding protein_coding MGP_LPJ_T0097229.1 MGP_LPJ_G0036015.1 mouse_genomes_project X 135412013 135415556 + MGP_LPJ_P0097229 Zcchc18 protein_coding protein_coding MGP_LPJ_T0097230.1 MGP_LPJ_G0036015.1 mouse_genomes_project X 135412152 135417912 + MGP_LPJ_P0097230 Zcchc18 protein_coding protein_coding MGP_LPJ_T0096504.1 MGP_LPJ_G0035783.1 mouse_genomes_project X 82434634 82475114 + MGP_LPJ_P0096504 protein_coding protein_coding MGP_LPJ_T0096505.1 MGP_LPJ_G0035783.1 mouse_genomes_project X 82434639 82436226 + protein_coding processed_transcript MGP_LPJ_T0096506.1 MGP_LPJ_G0035783.1 mouse_genomes_project X 82434750 82474904 + MGP_LPJ_P0096506 protein_coding protein_coding MGP_LPJ_T0096507.1 MGP_LPJ_G0035783.1 mouse_genomes_project X 82434894 82491449 + MGP_LPJ_P0096507 protein_coding unknown_likely_coding MGP_LPJ_T0016400.1 MGP_LPJ_G0014491.1 mouse_genomes_project X 73714579 73715018 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009463.1 MGP_LPJ_G0007587.1 mouse_genomes_project X 168734180 168763884 + Gm15245 lincRNA lincRNA MGP_LPJ_T0016278.1 MGP_LPJ_G0014369.1 mouse_genomes_project X 45478040 45478713 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097801.1 MGP_LPJ_G0036157.1 mouse_genomes_project X 164367564 164577446 - MGP_LPJ_P0097801 Glra2 protein_coding protein_coding MGP_LPJ_T0096782.1 MGP_LPJ_G0035858.1 mouse_genomes_project X 98918411 98922865 + MGP_LPJ_P0096782 Itgb1bp2 protein_coding protein_coding MGP_LPJ_T0096783.1 MGP_LPJ_G0035858.1 mouse_genomes_project X 98921434 98922468 + Itgb1bp2 protein_coding retained_intron MGP_LPJ_T0101171.1 MGP_LPJ_G0039434.1 mouse_genomes_project X 79458999 79459131 - Gm24470 snoRNA snoRNA MGP_LPJ_T0016495.1 MGP_LPJ_G0014586.1 mouse_genomes_project X 91914242 91915860 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016283.1 MGP_LPJ_G0014374.1 mouse_genomes_project X 46749250 46749939 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099907.1 MGP_LPJ_G0038170.1 mouse_genomes_project X 85150072 85150179 + Gm25006 snRNA snRNA MGP_LPJ_T0016493.1 MGP_LPJ_G0014584.1 mouse_genomes_project X 91847607 91848085 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097426.1 MGP_LPJ_G0036069.1 mouse_genomes_project X 149308568 149379285 - MGP_LPJ_P0097426 Apex2 protein_coding protein_coding MGP_LPJ_T0097427.1 MGP_LPJ_G0036069.1 mouse_genomes_project X 149309401 149377523 - MGP_LPJ_P0097427 Apex2 protein_coding protein_coding MGP_LPJ_T0097433.1 MGP_LPJ_G0036069.1 mouse_genomes_project X 149352898 149379285 - MGP_LPJ_P0097433 Apex2 protein_coding protein_coding MGP_LPJ_T0097434.1 MGP_LPJ_G0036069.1 mouse_genomes_project X 149355543 149377526 - Apex2 protein_coding retained_intron MGP_LPJ_T0097435.1 MGP_LPJ_G0036069.1 mouse_genomes_project X 149355544 149379309 - Apex2 protein_coding processed_transcript MGP_LPJ_T0097436.1 MGP_LPJ_G0036069.1 mouse_genomes_project X 149355544 149377590 - MGP_LPJ_P0097436 Apex2 protein_coding protein_coding MGP_LPJ_T0097437.1 MGP_LPJ_G0036069.1 mouse_genomes_project X 149355544 149377537 - MGP_LPJ_P0097437 Apex2 protein_coding protein_coding MGP_LPJ_T0097438.1 MGP_LPJ_G0036069.1 mouse_genomes_project X 149356495 149375647 - Apex2 protein_coding processed_transcript MGP_LPJ_T0097439.1 MGP_LPJ_G0036069.1 mouse_genomes_project X 149356585 149377512 - MGP_LPJ_P0097439 Apex2 protein_coding protein_coding MGP_LPJ_T0097440.1 MGP_LPJ_G0036069.1 mouse_genomes_project X 149373576 149377522 - MGP_LPJ_P0097440 Apex2 protein_coding protein_coding MGP_LPJ_T0099881.1 MGP_LPJ_G0038144.1 mouse_genomes_project X 15749724 15749897 - Gm23628 snRNA snRNA MGP_LPJ_T0095139.1 MGP_LPJ_G0035391.1 mouse_genomes_project X 1030605 1270642 + MGP_LPJ_P0095139 Shroom4 protein_coding protein_coding MGP_LPJ_T0095140.1 MGP_LPJ_G0035391.1 mouse_genomes_project X 1044845 1222147 + MGP_LPJ_P0095140 Shroom4 protein_coding protein_coding MGP_LPJ_T0095141.1 MGP_LPJ_G0035391.1 mouse_genomes_project X 1215892 1274253 + MGP_LPJ_P0095141 Shroom4 protein_coding protein_coding MGP_LPJ_T0016739.1 MGP_LPJ_G0014830.1 mouse_genomes_project X 140305935 140306908 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016368.1 MGP_LPJ_G0014459.1 mouse_genomes_project X 67007444 67007937 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098434.1 MGP_LPJ_G0036715.1 mouse_genomes_project X 90728063 90728201 - Gm23557 scaRNA scaRNA MGP_LPJ_T0095342.1 MGP_LPJ_G0035438.1 mouse_genomes_project X 3259280 3425423 - MGP_LPJ_P0095342 protein_coding protein_coding MGP_LPJ_T0095343.1 MGP_LPJ_G0035438.1 mouse_genomes_project X 3259695 3425423 - MGP_LPJ_P0095343 protein_coding protein_coding MGP_LPJ_T0096726.1 MGP_LPJ_G0035848.1 mouse_genomes_project X 98550221 98682754 - MGP_LPJ_P0096726 Snx12 protein_coding protein_coding MGP_LPJ_T0096727.1 MGP_LPJ_G0035848.1 mouse_genomes_project X 98672175 98682764 - MGP_LPJ_P0096727 Snx12 protein_coding protein_coding MGP_LPJ_T0096728.1 MGP_LPJ_G0035848.1 mouse_genomes_project X 98672175 98682750 - MGP_LPJ_P0096728 Snx12 protein_coding protein_coding MGP_LPJ_T0096729.1 MGP_LPJ_G0035848.1 mouse_genomes_project X 98673681 98674734 - Snx12 protein_coding processed_transcript MGP_LPJ_T0095408.1 MGP_LPJ_G0035462.1 mouse_genomes_project X 8325538 8338621 + MGP_LPJ_P0095408 Ddx3x protein_coding protein_coding MGP_LPJ_T0095409.1 MGP_LPJ_G0035462.1 mouse_genomes_project X 8325590 8336591 + Ddx3x protein_coding processed_transcript MGP_LPJ_T0095410.1 MGP_LPJ_G0035462.1 mouse_genomes_project X 8325600 8332441 + Ddx3x protein_coding retained_intron MGP_LPJ_T0095411.1 MGP_LPJ_G0035462.1 mouse_genomes_project X 8331852 8333421 + Ddx3x protein_coding retained_intron MGP_LPJ_T0095412.1 MGP_LPJ_G0035462.1 mouse_genomes_project X 8332353 8334484 + Ddx3x protein_coding retained_intron MGP_LPJ_T0096135.1 MGP_LPJ_G0035710.1 mouse_genomes_project X 70351222 70384579 - MGP_LPJ_P0096135 Pdzd4 protein_coding protein_coding MGP_LPJ_T0096136.1 MGP_LPJ_G0035710.1 mouse_genomes_project X 70351222 70384579 - MGP_LPJ_P0096136 Pdzd4 protein_coding protein_coding MGP_LPJ_T0096603.1 MGP_LPJ_G0035817.1 mouse_genomes_project X 92983999 93003926 - MGP_LPJ_P0096603 Zc4h2 protein_coding protein_coding MGP_LPJ_T0096604.1 MGP_LPJ_G0035817.1 mouse_genomes_project X 92984002 93003901 - MGP_LPJ_P0096604 Zc4h2 protein_coding protein_coding MGP_LPJ_T0096605.1 MGP_LPJ_G0035817.1 mouse_genomes_project X 92984005 93004027 - MGP_LPJ_P0096605 Zc4h2 protein_coding protein_coding MGP_LPJ_T0102497.1 MGP_LPJ_G0040533.1 mouse_genomes_project X 72105327 72147058 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0016152.1 MGP_LPJ_G0014243.1 mouse_genomes_project X 3750457 3751045 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016250.1 MGP_LPJ_G0014341.1 mouse_genomes_project X 37509266 37512319 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016418.1 MGP_LPJ_G0014509.1 mouse_genomes_project X 76775940 76776642 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102507.1 MGP_LPJ_G0040543.1 mouse_genomes_project X 88710208 88711127 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0097852.1 MGP_LPJ_G0036171.1 mouse_genomes_project X 168086606 168593425 + MGP_LPJ_P0097852 Arhgap6 protein_coding protein_coding MGP_LPJ_T0097853.1 MGP_LPJ_G0036171.1 mouse_genomes_project X 168330444 168549075 + Arhgap6 protein_coding retained_intron MGP_LPJ_T0097854.1 MGP_LPJ_G0036171.1 mouse_genomes_project X 168330444 168556522 + MGP_LPJ_P0097854 Arhgap6 protein_coding protein_coding MGP_LPJ_T0097855.1 MGP_LPJ_G0036171.1 mouse_genomes_project X 168330444 168593425 + MGP_LPJ_P0097855 Arhgap6 protein_coding nonsense_mediated_decay MGP_LPJ_T0097856.1 MGP_LPJ_G0036171.1 mouse_genomes_project X 168330444 168551617 + MGP_LPJ_P0097856 Arhgap6 protein_coding protein_coding MGP_LPJ_T0097857.1 MGP_LPJ_G0036171.1 mouse_genomes_project X 168330444 168593425 + MGP_LPJ_P0097857 Arhgap6 protein_coding protein_coding MGP_LPJ_T0097858.1 MGP_LPJ_G0036171.1 mouse_genomes_project X 168411845 168593425 + MGP_LPJ_P0097858 Arhgap6 protein_coding protein_coding MGP_LPJ_T0097864.1 MGP_LPJ_G0036171.1 mouse_genomes_project X 168511166 168584101 + MGP_LPJ_P0097864 Arhgap6 protein_coding unknown_likely_coding MGP_LPJ_T0095894.1 MGP_LPJ_G0035631.1 mouse_genomes_project X 52769173 52876643 + MGP_LPJ_P0095894 protein_coding protein_coding MGP_LPJ_T0095895.1 MGP_LPJ_G0035631.1 mouse_genomes_project X 52771512 52876675 + MGP_LPJ_P0095895 protein_coding protein_coding MGP_LPJ_T0095896.1 MGP_LPJ_G0035631.1 mouse_genomes_project X 52788921 52894409 + MGP_LPJ_P0095896 protein_coding protein_coding MGP_LPJ_T0095897.1 MGP_LPJ_G0035631.1 mouse_genomes_project X 52807170 52807701 + MGP_LPJ_P0095897 protein_coding protein_coding MGP_LPJ_T0095898.1 MGP_LPJ_G0035631.1 mouse_genomes_project X 52859442 52876658 + MGP_LPJ_P0095898 protein_coding protein_coding MGP_LPJ_T0095899.1 MGP_LPJ_G0035631.1 mouse_genomes_project X 52864146 52876665 + MGP_LPJ_P0095899 protein_coding protein_coding MGP_LPJ_T0016658.1 MGP_LPJ_G0014749.1 mouse_genomes_project X 120033958 120034254 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005637.1 MGP_LPJ_G0004749.1 mouse_genomes_project X 156818316 156847790 - Gm15169 antisense antisense MGP_LPJ_T0005638.1 MGP_LPJ_G0004749.1 mouse_genomes_project X 156835393 156847783 - Gm15169 antisense antisense MGP_LPJ_T0098361.1 MGP_LPJ_G0036642.1 mouse_genomes_project X 158509477 158509586 + Gm23806 rRNA rRNA MGP_LPJ_T0016393.1 MGP_LPJ_G0014484.1 mouse_genomes_project X 72583697 72585009 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097021.1 MGP_LPJ_G0035940.1 mouse_genomes_project X 114161654 114192639 + MGP_LPJ_P0097021 Cpxcr1 protein_coding protein_coding MGP_LPJ_T0016392.1 MGP_LPJ_G0014483.1 mouse_genomes_project X 72123870 72124162 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016711.1 MGP_LPJ_G0014802.1 mouse_genomes_project X 135521683 135522270 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097820.1 MGP_LPJ_G0036161.1 mouse_genomes_project X 165692417 165704980 + MGP_LPJ_P0097820 Trappc2 protein_coding protein_coding MGP_LPJ_T0097821.1 MGP_LPJ_G0036161.1 mouse_genomes_project X 165692619 165703817 + Trappc2 protein_coding retained_intron MGP_LPJ_T0097822.1 MGP_LPJ_G0036161.1 mouse_genomes_project X 165692619 165704978 + MGP_LPJ_P0097822 Trappc2 protein_coding protein_coding MGP_LPJ_T0097823.1 MGP_LPJ_G0036161.1 mouse_genomes_project X 165697144 165704980 + MGP_LPJ_P0097823 Trappc2 protein_coding protein_coding MGP_LPJ_T0099891.1 MGP_LPJ_G0038154.1 mouse_genomes_project X 43730769 43730928 + Gm24038 snRNA snRNA MGP_LPJ_T0096871.1 MGP_LPJ_G0035896.1 mouse_genomes_project X 103457127 103467778 + MGP_LPJ_P0096871 Fgf16 protein_coding protein_coding MGP_LPJ_T0016825.1 MGP_LPJ_G0014916.1 mouse_genomes_project X 156715869 156716203 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099914.1 MGP_LPJ_G0038177.1 mouse_genomes_project X 101689072 101689179 - Gm23378 snRNA snRNA MGP_LPJ_T0005618.1 MGP_LPJ_G0004735.1 mouse_genomes_project X 72214994 72215702 + Gm15384 antisense antisense MGP_LPJ_T0101170.1 MGP_LPJ_G0039433.1 mouse_genomes_project X 79193645 79193782 - Gm24706 snoRNA snoRNA MGP_LPJ_T0099904.1 MGP_LPJ_G0038167.1 mouse_genomes_project X 72240541 72240705 - Gm25421 snRNA snRNA MGP_LPJ_T0016359.1 MGP_LPJ_G0014450.1 mouse_genomes_project X 65012173 65012521 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016468.1 MGP_LPJ_G0014559.1 mouse_genomes_project X 88296485 88296860 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097081.1 MGP_LPJ_G0035963.1 mouse_genomes_project X 132226706 132246870 + MGP_LPJ_P0097081 Arl13a protein_coding protein_coding MGP_LPJ_T0018556.1 MGP_LPJ_G0015688.1 mouse_genomes_project X 2350121 2359351 + processed_transcript processed_transcript MGP_LPJ_T0097776.1 MGP_LPJ_G0036150.1 mouse_genomes_project X 163592456 163625249 + MGP_LPJ_P0097776 Vegfd protein_coding protein_coding MGP_LPJ_T0097777.1 MGP_LPJ_G0036150.1 mouse_genomes_project X 163611461 163620983 + Vegfd protein_coding retained_intron MGP_LPJ_T0097746.1 MGP_LPJ_G0036142.1 mouse_genomes_project X 163129577 163154092 + MGP_LPJ_P0097746 Ap1s2 protein_coding protein_coding MGP_LPJ_T0097747.1 MGP_LPJ_G0036142.1 mouse_genomes_project X 163129702 163153785 + MGP_LPJ_P0097747 Ap1s2 protein_coding protein_coding MGP_LPJ_T0097748.1 MGP_LPJ_G0036142.1 mouse_genomes_project X 163129705 163149972 + MGP_LPJ_P0097748 Ap1s2 protein_coding protein_coding MGP_LPJ_T0097749.1 MGP_LPJ_G0036142.1 mouse_genomes_project X 163131961 163153782 + MGP_LPJ_P0097749 Ap1s2 protein_coding protein_coding MGP_LPJ_T0016149.1 MGP_LPJ_G0014240.1 mouse_genomes_project X 3396363 3397890 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016458.1 MGP_LPJ_G0014549.1 mouse_genomes_project X 86377428 86377768 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095315.1 MGP_LPJ_G0035429.1 mouse_genomes_project X 2854629 2863542 - MGP_LPJ_P0095315 Ebp protein_coding protein_coding MGP_LPJ_T0095316.1 MGP_LPJ_G0035429.1 mouse_genomes_project X 2854631 2856473 - Ebp protein_coding retained_intron MGP_LPJ_T0095317.1 MGP_LPJ_G0035429.1 mouse_genomes_project X 2856046 2863430 - MGP_LPJ_P0095317 Ebp protein_coding protein_coding MGP_LPJ_T0095318.1 MGP_LPJ_G0035429.1 mouse_genomes_project X 2859153 2862928 - Ebp protein_coding retained_intron MGP_LPJ_T0016767.1 MGP_LPJ_G0014858.1 mouse_genomes_project X 144159136 144160084 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097004.1 MGP_LPJ_G0035935.1 mouse_genomes_project X 110685174 110878818 - MGP_LPJ_P0097004 Chm protein_coding protein_coding MGP_LPJ_T0097005.1 MGP_LPJ_G0035935.1 mouse_genomes_project X 110687762 110692168 - Chm protein_coding processed_transcript MGP_LPJ_T0097006.1 MGP_LPJ_G0035935.1 mouse_genomes_project X 110706903 110830684 - Chm protein_coding processed_transcript MGP_LPJ_T0097007.1 MGP_LPJ_G0035935.1 mouse_genomes_project X 110768400 110830684 - Chm protein_coding processed_transcript MGP_LPJ_T0096201.1 MGP_LPJ_G0035717.1 mouse_genomes_project X 70581462 70591453 - MGP_LPJ_P0096201 Irak1 protein_coding protein_coding MGP_LPJ_T0096202.1 MGP_LPJ_G0035717.1 mouse_genomes_project X 70581466 70591450 - MGP_LPJ_P0096202 Irak1 protein_coding protein_coding MGP_LPJ_T0096203.1 MGP_LPJ_G0035717.1 mouse_genomes_project X 70581474 70591450 - MGP_LPJ_P0096203 Irak1 protein_coding protein_coding MGP_LPJ_T0096204.1 MGP_LPJ_G0035717.1 mouse_genomes_project X 70581474 70591450 - MGP_LPJ_P0096204 Irak1 protein_coding protein_coding MGP_LPJ_T0096205.1 MGP_LPJ_G0035717.1 mouse_genomes_project X 70582342 70591361 - Irak1 protein_coding retained_intron MGP_LPJ_T0096206.1 MGP_LPJ_G0035717.1 mouse_genomes_project X 70582342 70591361 - Irak1 protein_coding retained_intron MGP_LPJ_T0096207.1 MGP_LPJ_G0035717.1 mouse_genomes_project X 70582507 70591448 - MGP_LPJ_P0096207 Irak1 protein_coding protein_coding MGP_LPJ_T0096208.1 MGP_LPJ_G0035717.1 mouse_genomes_project X 70582894 70585871 - MGP_LPJ_P0096208 Irak1 protein_coding protein_coding MGP_LPJ_T0096209.1 MGP_LPJ_G0035717.1 mouse_genomes_project X 70582908 70587478 - MGP_LPJ_P0096209 Irak1 protein_coding protein_coding MGP_LPJ_T0096210.1 MGP_LPJ_G0035717.1 mouse_genomes_project X 70582976 70591280 - MGP_LPJ_P0096210 Irak1 protein_coding protein_coding MGP_LPJ_T0096211.1 MGP_LPJ_G0035717.1 mouse_genomes_project X 70582976 70591280 - MGP_LPJ_P0096211 Irak1 protein_coding protein_coding MGP_LPJ_T0096212.1 MGP_LPJ_G0035717.1 mouse_genomes_project X 70584084 70588525 - MGP_LPJ_P0096212 Irak1 protein_coding protein_coding MGP_LPJ_T0096213.1 MGP_LPJ_G0035717.1 mouse_genomes_project X 70584666 70590032 - MGP_LPJ_P0096213 Irak1 protein_coding protein_coding MGP_LPJ_T0096214.1 MGP_LPJ_G0035717.1 mouse_genomes_project X 70588536 70590187 - Irak1 protein_coding retained_intron MGP_LPJ_T0096215.1 MGP_LPJ_G0035717.1 mouse_genomes_project X 70588536 70590627 - MGP_LPJ_P0096215 Irak1 protein_coding protein_coding MGP_LPJ_T0096216.1 MGP_LPJ_G0035717.1 mouse_genomes_project X 70589722 70590709 - MGP_LPJ_P0096216 Irak1 protein_coding protein_coding MGP_LPJ_T0096217.1 MGP_LPJ_G0035717.1 mouse_genomes_project X 70589764 70590480 - MGP_LPJ_P0096217 Irak1 protein_coding protein_coding MGP_LPJ_T0096218.1 MGP_LPJ_G0035717.1 mouse_genomes_project X 70589773 70591262 - Irak1 protein_coding processed_transcript MGP_LPJ_T0096219.1 MGP_LPJ_G0035717.1 mouse_genomes_project X 70590153 70591343 - Irak1 protein_coding retained_intron MGP_LPJ_T0096220.1 MGP_LPJ_G0035717.1 mouse_genomes_project X 70590168 70590911 - Irak1 protein_coding retained_intron MGP_LPJ_T0096221.1 MGP_LPJ_G0035717.1 mouse_genomes_project X 70590281 70591043 - Irak1 protein_coding processed_transcript MGP_LPJ_T0096222.1 MGP_LPJ_G0035717.1 mouse_genomes_project X 70590630 70591366 - Irak1 protein_coding retained_intron MGP_LPJ_T0016301.1 MGP_LPJ_G0014392.1 mouse_genomes_project X 53641357 53643365 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102522.1 MGP_LPJ_G0040558.1 mouse_genomes_project X 146276128 146276456 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0009392.1 MGP_LPJ_G0007542.1 mouse_genomes_project X 44860476 44895400 - Gm14696 lincRNA lincRNA MGP_LPJ_T0095882.1 MGP_LPJ_G0035629.1 mouse_genomes_project X 52621140 52685037 + MGP_LPJ_P0095882 Fhl1 protein_coding protein_coding MGP_LPJ_T0095883.1 MGP_LPJ_G0035629.1 mouse_genomes_project X 52621351 52683934 + MGP_LPJ_P0095883 Fhl1 protein_coding protein_coding MGP_LPJ_T0095884.1 MGP_LPJ_G0035629.1 mouse_genomes_project X 52646274 52685045 + MGP_LPJ_P0095884 Fhl1 protein_coding protein_coding MGP_LPJ_T0095885.1 MGP_LPJ_G0035629.1 mouse_genomes_project X 52671148 52685039 + MGP_LPJ_P0095885 Fhl1 protein_coding protein_coding MGP_LPJ_T0095886.1 MGP_LPJ_G0035629.1 mouse_genomes_project X 52671434 52685039 + MGP_LPJ_P0095886 Fhl1 protein_coding protein_coding MGP_LPJ_T0095887.1 MGP_LPJ_G0035629.1 mouse_genomes_project X 52671441 52684287 + MGP_LPJ_P0095887 Fhl1 protein_coding protein_coding MGP_LPJ_T0095888.1 MGP_LPJ_G0035629.1 mouse_genomes_project X 52671530 52680904 + MGP_LPJ_P0095888 Fhl1 protein_coding protein_coding MGP_LPJ_T0095889.1 MGP_LPJ_G0035629.1 mouse_genomes_project X 52678238 52682365 + MGP_LPJ_P0095889 Fhl1 protein_coding protein_coding MGP_LPJ_T0095890.1 MGP_LPJ_G0035629.1 mouse_genomes_project X 52679423 52680954 + MGP_LPJ_P0095890 Fhl1 protein_coding protein_coding MGP_LPJ_T0095891.1 MGP_LPJ_G0035629.1 mouse_genomes_project X 52679696 52681442 + Fhl1 protein_coding processed_transcript MGP_LPJ_T0095602.1 MGP_LPJ_G0035532.1 mouse_genomes_project X 32771329 32777687 + MGP_LPJ_P0095602 Rhox2d protein_coding protein_coding MGP_LPJ_T0018637.1 MGP_LPJ_G0015714.1 mouse_genomes_project X 151238854 151279937 + 3010001F23Rik processed_transcript processed_transcript MGP_LPJ_T0018638.1 MGP_LPJ_G0015714.1 mouse_genomes_project X 151239668 151256863 + 3010001F23Rik processed_transcript processed_transcript MGP_LPJ_T0097802.1 MGP_LPJ_G0036158.1 mouse_genomes_project X 165406528 165425646 + MGP_LPJ_P0097802 Gemin8 protein_coding protein_coding MGP_LPJ_T0097803.1 MGP_LPJ_G0036158.1 mouse_genomes_project X 165406528 165426354 + MGP_LPJ_P0097803 Gemin8 protein_coding protein_coding MGP_LPJ_T0097804.1 MGP_LPJ_G0036158.1 mouse_genomes_project X 165406569 165426352 + MGP_LPJ_P0097804 Gemin8 protein_coding protein_coding MGP_LPJ_T0097805.1 MGP_LPJ_G0036158.1 mouse_genomes_project X 165414198 165416578 + MGP_LPJ_P0097805 Gemin8 protein_coding protein_coding MGP_LPJ_T0097806.1 MGP_LPJ_G0036158.1 mouse_genomes_project X 165414220 165425133 + MGP_LPJ_P0097806 Gemin8 protein_coding protein_coding MGP_LPJ_T0016838.1 MGP_LPJ_G0014929.1 mouse_genomes_project X 159115941 159116375 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096861.1 MGP_LPJ_G0035889.1 mouse_genomes_project X 101968929 102112389 - MGP_LPJ_P0096861 Abcb7 protein_coding protein_coding MGP_LPJ_T0096862.1 MGP_LPJ_G0035889.1 mouse_genomes_project X 102034948 102112399 - Abcb7 protein_coding retained_intron MGP_LPJ_T0016172.1 MGP_LPJ_G0014263.1 mouse_genomes_project X 7683089 7683197 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096827.1 MGP_LPJ_G0035872.1 mouse_genomes_project X 100022457 100156369 - MGP_LPJ_P0096827 Phka1 protein_coding protein_coding MGP_LPJ_T0096828.1 MGP_LPJ_G0035872.1 mouse_genomes_project X 100022457 100156369 - MGP_LPJ_P0096828 Phka1 protein_coding protein_coding MGP_LPJ_T0096829.1 MGP_LPJ_G0035872.1 mouse_genomes_project X 100022457 100156369 - MGP_LPJ_P0096829 Phka1 protein_coding protein_coding MGP_LPJ_T0096830.1 MGP_LPJ_G0035872.1 mouse_genomes_project X 100022457 100156369 - MGP_LPJ_P0096830 Phka1 protein_coding protein_coding MGP_LPJ_T0096831.1 MGP_LPJ_G0035872.1 mouse_genomes_project X 100022457 100156369 - MGP_LPJ_P0096831 Phka1 protein_coding protein_coding MGP_LPJ_T0096832.1 MGP_LPJ_G0035872.1 mouse_genomes_project X 100022457 100156369 - MGP_LPJ_P0096832 Phka1 protein_coding protein_coding MGP_LPJ_T0096833.1 MGP_LPJ_G0035872.1 mouse_genomes_project X 100067168 100156369 - Phka1 protein_coding retained_intron MGP_LPJ_T0101448.1 MGP_LPJ_G0039609.1 mouse_genomes_project X 126248028 126248670 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0016675.1 MGP_LPJ_G0014766.1 mouse_genomes_project X 128495000 128495442 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016310.1 MGP_LPJ_G0014401.1 mouse_genomes_project X 54631303 54631765 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016302.1 MGP_LPJ_G0014393.1 mouse_genomes_project X 53649885 53650876 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016485.1 MGP_LPJ_G0014576.1 mouse_genomes_project X 91193877 91194644 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016311.1 MGP_LPJ_G0014402.1 mouse_genomes_project X 55151751 55152427 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102526.1 MGP_LPJ_G0040562.1 mouse_genomes_project X 153102305 153102788 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0016755.1 MGP_LPJ_G0014846.1 mouse_genomes_project X 142711388 142712211 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099898.1 MGP_LPJ_G0038161.1 mouse_genomes_project X 55145697 55145791 + Gm26487 snRNA snRNA MGP_LPJ_T0095413.1 MGP_LPJ_G0035463.1 mouse_genomes_project X 8502051 8525274 + MGP_LPJ_P0095413 Nyx protein_coding protein_coding MGP_LPJ_T0097743.1 MGP_LPJ_G0036139.1 mouse_genomes_project X 162170064 162173503 - MGP_LPJ_P0097743 S100g protein_coding protein_coding MGP_LPJ_T0097787.1 MGP_LPJ_G0036153.1 mouse_genomes_project X 163736953 163769937 + MGP_LPJ_P0097787 Asb9 protein_coding protein_coding MGP_LPJ_T0011244.1 MGP_LPJ_G0009362.1 mouse_genomes_project X 162080327 162080405 - Mir3473a miRNA miRNA MGP_LPJ_T0016765.1 MGP_LPJ_G0014856.1 mouse_genomes_project X 143781546 143782242 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096974.1 MGP_LPJ_G0035926.1 mouse_genomes_project X 109001902 109079530 - MGP_LPJ_P0096974 protein_coding protein_coding MGP_LPJ_T0096975.1 MGP_LPJ_G0035926.1 mouse_genomes_project X 109001902 109079407 - MGP_LPJ_P0096975 protein_coding protein_coding MGP_LPJ_T0096976.1 MGP_LPJ_G0035926.1 mouse_genomes_project X 109001903 109079530 - MGP_LPJ_P0096976 protein_coding protein_coding MGP_LPJ_T0096977.1 MGP_LPJ_G0035926.1 mouse_genomes_project X 109001903 109098809 - MGP_LPJ_P0096977 protein_coding protein_coding MGP_LPJ_T0096978.1 MGP_LPJ_G0035926.1 mouse_genomes_project X 109003490 109079469 - MGP_LPJ_P0096978 protein_coding protein_coding MGP_LPJ_T0096979.1 MGP_LPJ_G0035926.1 mouse_genomes_project X 109050175 109098788 - MGP_LPJ_P0096979 protein_coding protein_coding MGP_LPJ_T0096980.1 MGP_LPJ_G0035926.1 mouse_genomes_project X 109051113 109144621 - MGP_LPJ_P0096980 protein_coding protein_coding MGP_LPJ_T0096981.1 MGP_LPJ_G0035926.1 mouse_genomes_project X 109055028 109079003 - MGP_LPJ_P0096981 protein_coding nonsense_mediated_decay MGP_LPJ_T0096982.1 MGP_LPJ_G0035926.1 mouse_genomes_project X 109055105 109153930 - MGP_LPJ_P0096982 protein_coding protein_coding MGP_LPJ_T0096983.1 MGP_LPJ_G0035926.1 mouse_genomes_project X 109061892 109153942 - MGP_LPJ_P0096983 protein_coding protein_coding MGP_LPJ_T0096984.1 MGP_LPJ_G0035926.1 mouse_genomes_project X 109065985 109152325 - MGP_LPJ_P0096984 protein_coding protein_coding MGP_LPJ_T0096044.1 MGP_LPJ_G0035682.1 mouse_genomes_project X 68779077 68797801 - MGP_LPJ_P0096044 Gabre protein_coding protein_coding MGP_LPJ_T0096045.1 MGP_LPJ_G0035682.1 mouse_genomes_project X 68784448 68792846 - Gabre protein_coding processed_transcript MGP_LPJ_T0096046.1 MGP_LPJ_G0035682.1 mouse_genomes_project X 68792050 68797801 - Gabre protein_coding retained_intron MGP_LPJ_T0095468.1 MGP_LPJ_G0035483.1 mouse_genomes_project X 15750527 15752821 - MGP_LPJ_P0095468 Ndufb11 protein_coding protein_coding MGP_LPJ_T0016543.1 MGP_LPJ_G0014634.1 mouse_genomes_project X 100694438 100694951 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097104.1 MGP_LPJ_G0035970.1 mouse_genomes_project X 132596464 132600799 - MGP_LPJ_P0097104 protein_coding protein_coding MGP_LPJ_T0102482.1 MGP_LPJ_G0040518.1 mouse_genomes_project X 32873069 32877271 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0095525.1 MGP_LPJ_G0035497.1 mouse_genomes_project X 16286508 16291881 + MGP_LPJ_P0095525 Ssxa1 protein_coding protein_coding MGP_LPJ_T0095526.1 MGP_LPJ_G0035497.1 mouse_genomes_project X 16289060 16291881 + MGP_LPJ_P0095526 Ssxa1 protein_coding protein_coding MGP_LPJ_T0016328.1 MGP_LPJ_G0014419.1 mouse_genomes_project X 57787256 57787908 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095285.1 MGP_LPJ_G0035422.1 mouse_genomes_project X 2610383 2618818 - MGP_LPJ_P0095285 Gata1 protein_coding protein_coding MGP_LPJ_T0095286.1 MGP_LPJ_G0035422.1 mouse_genomes_project X 2613347 2628927 - MGP_LPJ_P0095286 Gata1 protein_coding protein_coding MGP_LPJ_T0095287.1 MGP_LPJ_G0035422.1 mouse_genomes_project X 2613936 2615074 - MGP_LPJ_P0095287 Gata1 protein_coding protein_coding MGP_LPJ_T0095645.1 MGP_LPJ_G0035553.1 mouse_genomes_project X 33675559 33697175 + MGP_LPJ_P0095645 Atp1b4 protein_coding protein_coding MGP_LPJ_T0095646.1 MGP_LPJ_G0035553.1 mouse_genomes_project X 33675559 33697175 + MGP_LPJ_P0095646 Atp1b4 protein_coding protein_coding MGP_LPJ_T0095544.1 MGP_LPJ_G0035505.1 mouse_genomes_project X 19154312 19155545 - MGP_LPJ_P0095544 Gm4985 protein_coding protein_coding MGP_LPJ_T0097062.1 MGP_LPJ_G0035959.1 mouse_genomes_project X 131960493 131985987 - MGP_LPJ_P0097062 Sytl4 protein_coding protein_coding MGP_LPJ_T0097063.1 MGP_LPJ_G0035959.1 mouse_genomes_project X 131970179 132005589 - MGP_LPJ_P0097063 Sytl4 protein_coding protein_coding MGP_LPJ_T0097064.1 MGP_LPJ_G0035959.1 mouse_genomes_project X 131974037 131984742 - Sytl4 protein_coding processed_transcript MGP_LPJ_T0097065.1 MGP_LPJ_G0035959.1 mouse_genomes_project X 131976079 132005586 - MGP_LPJ_P0097065 Sytl4 protein_coding protein_coding MGP_LPJ_T0016220.1 MGP_LPJ_G0014311.1 mouse_genomes_project X 31065613 31066846 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097082.1 MGP_LPJ_G0035964.1 mouse_genomes_project X 132262276 132319727 - MGP_LPJ_P0097082 Trmt2b protein_coding nonsense_mediated_decay MGP_LPJ_T0097083.1 MGP_LPJ_G0035964.1 mouse_genomes_project X 132263032 132319727 - MGP_LPJ_P0097083 Trmt2b protein_coding protein_coding MGP_LPJ_T0097084.1 MGP_LPJ_G0035964.1 mouse_genomes_project X 132263033 132319672 - Trmt2b protein_coding retained_intron MGP_LPJ_T0097085.1 MGP_LPJ_G0035964.1 mouse_genomes_project X 132263037 132319665 - MGP_LPJ_P0097085 Trmt2b protein_coding protein_coding MGP_LPJ_T0097086.1 MGP_LPJ_G0035964.1 mouse_genomes_project X 132302926 132319729 - MGP_LPJ_P0097086 Trmt2b protein_coding protein_coding MGP_LPJ_T0099905.1 MGP_LPJ_G0038168.1 mouse_genomes_project X 74280616 74280789 + Gm23121 snRNA snRNA MGP_LPJ_T0011778.1 MGP_LPJ_G0009896.1 mouse_genomes_project X 101134506 101134632 - Gm27927 misc_RNA misc_RNA MGP_LPJ_T0095779.1 MGP_LPJ_G0035585.1 mouse_genomes_project X 44149883 44157507 + Slc25a14 protein_coding processed_transcript MGP_LPJ_T0095780.1 MGP_LPJ_G0035585.1 mouse_genomes_project X 44150048 44205496 + MGP_LPJ_P0095780 Slc25a14 protein_coding protein_coding MGP_LPJ_T0095781.1 MGP_LPJ_G0035585.1 mouse_genomes_project X 44150048 44205496 + MGP_LPJ_P0095781 Slc25a14 protein_coding nonsense_mediated_decay MGP_LPJ_T0095782.1 MGP_LPJ_G0035585.1 mouse_genomes_project X 44150048 44205496 + MGP_LPJ_P0095782 Slc25a14 protein_coding protein_coding MGP_LPJ_T0095783.1 MGP_LPJ_G0035585.1 mouse_genomes_project X 44150219 44194595 + Slc25a14 protein_coding processed_transcript MGP_LPJ_T0095784.1 MGP_LPJ_G0035585.1 mouse_genomes_project X 44150235 44205496 + MGP_LPJ_P0095784 Slc25a14 protein_coding protein_coding MGP_LPJ_T0095785.1 MGP_LPJ_G0035585.1 mouse_genomes_project X 44150290 44164933 + Slc25a14 protein_coding retained_intron MGP_LPJ_T0095786.1 MGP_LPJ_G0035585.1 mouse_genomes_project X 44150432 44205494 + MGP_LPJ_P0095786 Slc25a14 protein_coding protein_coding MGP_LPJ_T0016592.1 MGP_LPJ_G0014683.1 mouse_genomes_project X 106980529 106981413 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016834.1 MGP_LPJ_G0014925.1 mouse_genomes_project X 158164286 158166863 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096114.1 MGP_LPJ_G0035707.1 mouse_genomes_project X 70332269 70336790 + Srpk3 protein_coding retained_intron MGP_LPJ_T0096115.1 MGP_LPJ_G0035707.1 mouse_genomes_project X 70332269 70336790 + MGP_LPJ_P0096115 Srpk3 protein_coding protein_coding MGP_LPJ_T0096116.1 MGP_LPJ_G0035707.1 mouse_genomes_project X 70335809 70336467 + Srpk3 protein_coding retained_intron MGP_LPJ_T0096117.1 MGP_LPJ_G0035707.1 mouse_genomes_project X 70335842 70336593 + Srpk3 protein_coding retained_intron MGP_LPJ_T0096956.1 MGP_LPJ_G0035916.1 mouse_genomes_project X 105774102 105776804 - MGP_LPJ_P0096956 Gm732 protein_coding protein_coding MGP_LPJ_T0096957.1 MGP_LPJ_G0035916.1 mouse_genomes_project X 105775243 105776833 - MGP_LPJ_P0096957 Gm732 protein_coding protein_coding MGP_LPJ_T0011162.1 MGP_LPJ_G0009280.1 mouse_genomes_project X 48617901 48617983 - Mir450b miRNA miRNA MGP_LPJ_T0011246.1 MGP_LPJ_G0009364.1 mouse_genomes_project X 166279680 166279789 - Gm22368 miRNA miRNA MGP_LPJ_T0011153.1 MGP_LPJ_G0009271.1 mouse_genomes_project X 44174409 44174528 + Gm27828 miRNA miRNA MGP_LPJ_T0096434.1 MGP_LPJ_G0035753.1 mouse_genomes_project X 72180999 72191063 + MGP_LPJ_P0096434 Vbp1 protein_coding protein_coding MGP_LPJ_T0096435.1 MGP_LPJ_G0035753.1 mouse_genomes_project X 72180999 72201922 + MGP_LPJ_P0096435 Vbp1 protein_coding protein_coding MGP_LPJ_T0096436.1 MGP_LPJ_G0035753.1 mouse_genomes_project X 72181017 72188770 + Vbp1 protein_coding retained_intron MGP_LPJ_T0095479.1 MGP_LPJ_G0035486.1 mouse_genomes_project X 15827326 15839265 + MGP_LPJ_P0095479 Cdk16 protein_coding protein_coding MGP_LPJ_T0095480.1 MGP_LPJ_G0035486.1 mouse_genomes_project X 15827371 15833747 + Cdk16 protein_coding processed_transcript MGP_LPJ_T0095481.1 MGP_LPJ_G0035486.1 mouse_genomes_project X 15827790 15839265 + MGP_LPJ_P0095481 Cdk16 protein_coding protein_coding MGP_LPJ_T0095482.1 MGP_LPJ_G0035486.1 mouse_genomes_project X 15833667 15835670 + Cdk16 protein_coding retained_intron MGP_LPJ_T0095483.1 MGP_LPJ_G0035486.1 mouse_genomes_project X 15835245 15835870 + Cdk16 protein_coding retained_intron MGP_LPJ_T0095484.1 MGP_LPJ_G0035486.1 mouse_genomes_project X 15835402 15836593 + Cdk16 protein_coding retained_intron MGP_LPJ_T0095485.1 MGP_LPJ_G0035486.1 mouse_genomes_project X 15835789 15836552 + Cdk16 protein_coding retained_intron MGP_LPJ_T0095486.1 MGP_LPJ_G0035486.1 mouse_genomes_project X 15835829 15839184 + Cdk16 protein_coding processed_transcript MGP_LPJ_T0016676.1 MGP_LPJ_G0014767.1 mouse_genomes_project X 128955438 128956832 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016558.1 MGP_LPJ_G0014649.1 mouse_genomes_project X 101368511 101369229 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009453.1 MGP_LPJ_G0007579.1 mouse_genomes_project X 160982113 160983967 - Scml1 lincRNA lincRNA MGP_LPJ_T0011207.1 MGP_LPJ_G0009325.1 mouse_genomes_project X 91609653 91609763 - Gm44477 miRNA miRNA MGP_LPJ_T0018582.1 MGP_LPJ_G0015698.1 mouse_genomes_project X 49337622 49339006 - processed_transcript TEC MGP_LPJ_T0018583.1 MGP_LPJ_G0015698.1 mouse_genomes_project X 49338635 49354390 - processed_transcript lincRNA MGP_LPJ_T0018584.1 MGP_LPJ_G0015698.1 mouse_genomes_project X 49338721 49376167 - processed_transcript lincRNA MGP_LPJ_T0018585.1 MGP_LPJ_G0015698.1 mouse_genomes_project X 49360057 49376361 - processed_transcript lincRNA MGP_LPJ_T0097206.1 MGP_LPJ_G0036007.1 mouse_genomes_project X 134964418 135025726 + protein_coding processed_transcript MGP_LPJ_T0097207.1 MGP_LPJ_G0036007.1 mouse_genomes_project X 134964425 135026289 + protein_coding processed_transcript MGP_LPJ_T0016570.1 MGP_LPJ_G0014661.1 mouse_genomes_project X 103294294 103294532 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096686.1 MGP_LPJ_G0035839.1 mouse_genomes_project X 98012581 98018536 + MGP_LPJ_P0096686 Awat1 protein_coding protein_coding MGP_LPJ_T0095626.1 MGP_LPJ_G0035542.1 mouse_genomes_project X 33097355 33101390 + MGP_LPJ_P0095626 Rhox5 protein_coding protein_coding MGP_LPJ_T0095627.1 MGP_LPJ_G0035542.1 mouse_genomes_project X 33097364 33101278 + MGP_LPJ_P0095627 Rhox5 protein_coding protein_coding MGP_LPJ_T0096552.1 MGP_LPJ_G0035804.1 mouse_genomes_project X 91247247 91298827 - MGP_LPJ_P0096552 Zfx protein_coding protein_coding MGP_LPJ_T0096554.1 MGP_LPJ_G0035804.1 mouse_genomes_project X 91255505 91298795 - MGP_LPJ_P0096554 Zfx protein_coding protein_coding MGP_LPJ_T0096555.1 MGP_LPJ_G0035804.1 mouse_genomes_project X 91271521 91298529 - MGP_LPJ_P0096555 Zfx protein_coding protein_coding MGP_LPJ_T0096556.1 MGP_LPJ_G0035804.1 mouse_genomes_project X 91272134 91299102 - Zfx protein_coding processed_transcript MGP_LPJ_T0096557.1 MGP_LPJ_G0035804.1 mouse_genomes_project X 91289196 91298552 - Zfx protein_coding retained_intron MGP_LPJ_T0016612.1 MGP_LPJ_G0014703.1 mouse_genomes_project X 110877230 110879010 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016835.1 MGP_LPJ_G0014926.1 mouse_genomes_project X 158468729 158468993 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099878.1 MGP_LPJ_G0038141.1 mouse_genomes_project X 12507285 12507389 + Gm22294 snRNA snRNA MGP_LPJ_T0095350.1 MGP_LPJ_G0035445.1 mouse_genomes_project X 4068386 4188070 + MGP_LPJ_P0095350 Lancl3 protein_coding protein_coding MGP_LPJ_T0011201.1 MGP_LPJ_G0009319.1 mouse_genomes_project X 70591383 70591471 - Mir718 miRNA miRNA MGP_LPJ_T0101425.1 MGP_LPJ_G0039595.1 mouse_genomes_project X 2769196 2770016 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0097658.1 MGP_LPJ_G0036122.1 mouse_genomes_project X 158703633 159072376 + MGP_LPJ_P0097658 Sh3kbp1 protein_coding protein_coding MGP_LPJ_T0097659.1 MGP_LPJ_G0036122.1 mouse_genomes_project X 158703902 159003624 + Sh3kbp1 protein_coding retained_intron MGP_LPJ_T0097660.1 MGP_LPJ_G0036122.1 mouse_genomes_project X 158703902 159067476 + MGP_LPJ_P0097660 Sh3kbp1 protein_coding protein_coding MGP_LPJ_T0097661.1 MGP_LPJ_G0036122.1 mouse_genomes_project X 158772977 158947066 + MGP_LPJ_P0097661 Sh3kbp1 protein_coding protein_coding MGP_LPJ_T0097662.1 MGP_LPJ_G0036122.1 mouse_genomes_project X 158784250 159068172 + MGP_LPJ_P0097662 Sh3kbp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0097663.1 MGP_LPJ_G0036122.1 mouse_genomes_project X 158784250 159068474 + MGP_LPJ_P0097663 Sh3kbp1 protein_coding protein_coding MGP_LPJ_T0097664.1 MGP_LPJ_G0036122.1 mouse_genomes_project X 158919652 159069971 + MGP_LPJ_P0097664 Sh3kbp1 protein_coding protein_coding MGP_LPJ_T0097665.1 MGP_LPJ_G0036122.1 mouse_genomes_project X 158919665 159068474 + MGP_LPJ_P0097665 Sh3kbp1 protein_coding protein_coding MGP_LPJ_T0097666.1 MGP_LPJ_G0036122.1 mouse_genomes_project X 158920148 159070223 + Sh3kbp1 protein_coding processed_transcript MGP_LPJ_T0097667.1 MGP_LPJ_G0036122.1 mouse_genomes_project X 159002397 159067626 + MGP_LPJ_P0097667 Sh3kbp1 protein_coding protein_coding MGP_LPJ_T0097668.1 MGP_LPJ_G0036122.1 mouse_genomes_project X 159034469 159066174 + Sh3kbp1 protein_coding processed_transcript MGP_LPJ_T0097669.1 MGP_LPJ_G0036122.1 mouse_genomes_project X 159035465 159070224 + Sh3kbp1 protein_coding processed_transcript MGP_LPJ_T0097670.1 MGP_LPJ_G0036122.1 mouse_genomes_project X 159035684 159068474 + Sh3kbp1 protein_coding processed_transcript MGP_LPJ_T0097671.1 MGP_LPJ_G0036122.1 mouse_genomes_project X 159035790 159067497 + Sh3kbp1 protein_coding processed_transcript MGP_LPJ_T0016432.1 MGP_LPJ_G0014523.1 mouse_genomes_project X 82098344 82098547 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011197.1 MGP_LPJ_G0009315.1 mouse_genomes_project X 69142652 69142759 - Mir767 miRNA miRNA MGP_LPJ_T0097353.1 MGP_LPJ_G0036056.1 mouse_genomes_project X 141769331 141884104 - MGP_LPJ_P0097353 Chrdl1 protein_coding protein_coding MGP_LPJ_T0097354.1 MGP_LPJ_G0036056.1 mouse_genomes_project X 141769341 141888977 - MGP_LPJ_P0097354 Chrdl1 protein_coding protein_coding MGP_LPJ_T0097355.1 MGP_LPJ_G0036056.1 mouse_genomes_project X 141780831 141888899 - MGP_LPJ_P0097355 Chrdl1 protein_coding protein_coding MGP_LPJ_T0097356.1 MGP_LPJ_G0036056.1 mouse_genomes_project X 141780833 141888611 - MGP_LPJ_P0097356 Chrdl1 protein_coding protein_coding MGP_LPJ_T0097357.1 MGP_LPJ_G0036056.1 mouse_genomes_project X 141783479 141888596 - MGP_LPJ_P0097357 Chrdl1 protein_coding unknown_likely_coding MGP_LPJ_T0096488.1 MGP_LPJ_G0035780.1 mouse_genomes_project X 79741158 80312583 + protein_coding retained_intron MGP_LPJ_T0096489.1 MGP_LPJ_G0035780.1 mouse_genomes_project X 79741191 82069257 + MGP_LPJ_P0096489 protein_coding protein_coding MGP_LPJ_T0096490.1 MGP_LPJ_G0035780.1 mouse_genomes_project X 79842327 80578591 + protein_coding retained_intron MGP_LPJ_T0096492.1 MGP_LPJ_G0035780.1 mouse_genomes_project X 80711095 80741900 + protein_coding processed_transcript MGP_LPJ_T0096493.1 MGP_LPJ_G0035780.1 mouse_genomes_project X 80782565 80783567 + protein_coding processed_transcript MGP_LPJ_T0096494.1 MGP_LPJ_G0035780.1 mouse_genomes_project X 80935765 81178036 + protein_coding processed_transcript MGP_LPJ_T0096495.1 MGP_LPJ_G0035780.1 mouse_genomes_project X 81463628 82004770 + protein_coding retained_intron MGP_LPJ_T0096496.1 MGP_LPJ_G0035780.1 mouse_genomes_project X 81626603 81830336 + protein_coding retained_intron MGP_LPJ_T0096497.1 MGP_LPJ_G0035780.1 mouse_genomes_project X 81907343 81914607 + protein_coding retained_intron MGP_LPJ_T0096498.1 MGP_LPJ_G0035780.1 mouse_genomes_project X 81907367 82001166 + protein_coding retained_intron MGP_LPJ_T0096499.1 MGP_LPJ_G0035780.1 mouse_genomes_project X 81907370 82004768 + protein_coding retained_intron MGP_LPJ_T0096500.1 MGP_LPJ_G0035780.1 mouse_genomes_project X 81907461 82068155 + MGP_LPJ_P0096500 protein_coding protein_coding MGP_LPJ_T0096501.1 MGP_LPJ_G0035780.1 mouse_genomes_project X 81907461 82065614 + MGP_LPJ_P0096501 protein_coding protein_coding MGP_LPJ_T0096502.1 MGP_LPJ_G0035780.1 mouse_genomes_project X 82038738 82065953 + protein_coding processed_transcript MGP_LPJ_T0102501.1 MGP_LPJ_G0040537.1 mouse_genomes_project X 83146601 83148008 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0005644.1 MGP_LPJ_G0004755.1 mouse_genomes_project X 169296586 169302000 - Gm15726 antisense antisense MGP_LPJ_T0095453.1 MGP_LPJ_G0035479.1 mouse_genomes_project X 15202456 15398242 - MGP_LPJ_P0095453 Slc9a7 protein_coding unknown_likely_coding MGP_LPJ_T0095454.1 MGP_LPJ_G0035479.1 mouse_genomes_project X 15206675 15398365 - MGP_LPJ_P0095454 Slc9a7 protein_coding protein_coding MGP_LPJ_T0095455.1 MGP_LPJ_G0035479.1 mouse_genomes_project X 15219621 15398344 - Slc9a7 protein_coding retained_intron MGP_LPJ_T0095456.1 MGP_LPJ_G0035479.1 mouse_genomes_project X 15251719 15398328 - MGP_LPJ_P0095456 Slc9a7 protein_coding protein_coding MGP_LPJ_T0095457.1 MGP_LPJ_G0035479.1 mouse_genomes_project X 15263964 15398365 - Slc9a7 protein_coding retained_intron MGP_LPJ_T0011791.1 MGP_LPJ_G0009909.1 mouse_genomes_project X 136235720 136236005 - Gm25393 misc_RNA misc_RNA MGP_LPJ_T0011790.1 MGP_LPJ_G0009908.1 mouse_genomes_project X 135082129 135082422 + Gm23068 misc_RNA misc_RNA MGP_LPJ_T0011211.1 MGP_LPJ_G0009329.1 mouse_genomes_project X 99506662 99506766 - Gm27843 miRNA miRNA MGP_LPJ_T0016556.1 MGP_LPJ_G0014647.1 mouse_genomes_project X 101327768 101328941 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011771.1 MGP_LPJ_G0009889.1 mouse_genomes_project X 62796868 62797133 + Gm23028 misc_RNA misc_RNA MGP_LPJ_T0096318.1 MGP_LPJ_G0035729.1 mouse_genomes_project X 70891808 70898912 + MGP_LPJ_P0096318 Fam50a protein_coding protein_coding MGP_LPJ_T0096319.1 MGP_LPJ_G0035729.1 mouse_genomes_project X 70891901 70898897 + Fam50a protein_coding retained_intron MGP_LPJ_T0096320.1 MGP_LPJ_G0035729.1 mouse_genomes_project X 70896260 70896758 + Fam50a protein_coding retained_intron MGP_LPJ_T0016355.1 MGP_LPJ_G0014446.1 mouse_genomes_project X 64411346 64411649 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101165.1 MGP_LPJ_G0039428.1 mouse_genomes_project X 71219505 71219640 + Gm26417 snoRNA snoRNA MGP_LPJ_T0016550.1 MGP_LPJ_G0014641.1 mouse_genomes_project X 101152802 101153257 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097469.1 MGP_LPJ_G0036074.1 mouse_genomes_project X 149794753 149829505 - MGP_LPJ_P0097469 Gnl3l protein_coding protein_coding MGP_LPJ_T0097470.1 MGP_LPJ_G0036074.1 mouse_genomes_project X 149794753 149829505 - MGP_LPJ_P0097470 Gnl3l protein_coding protein_coding MGP_LPJ_T0097471.1 MGP_LPJ_G0036074.1 mouse_genomes_project X 149799454 149805557 - Gnl3l protein_coding retained_intron MGP_LPJ_T0097472.1 MGP_LPJ_G0036074.1 mouse_genomes_project X 149808934 149811586 - Gnl3l protein_coding retained_intron MGP_LPJ_T0097473.1 MGP_LPJ_G0036074.1 mouse_genomes_project X 149809304 149829505 - MGP_LPJ_P0097473 Gnl3l protein_coding protein_coding MGP_LPJ_T0097474.1 MGP_LPJ_G0036074.1 mouse_genomes_project X 149814016 149829505 - MGP_LPJ_P0097474 Gnl3l protein_coding nonsense_mediated_decay MGP_LPJ_T0097475.1 MGP_LPJ_G0036074.1 mouse_genomes_project X 149814060 149829505 - MGP_LPJ_P0097475 Gnl3l protein_coding protein_coding MGP_LPJ_T0016662.1 MGP_LPJ_G0014753.1 mouse_genomes_project X 124256755 124257418 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005609.1 MGP_LPJ_G0004727.1 mouse_genomes_project X 52243386 52249061 - antisense antisense MGP_LPJ_T0097277.1 MGP_LPJ_G0036030.1 mouse_genomes_project X 138286685 138297268 + MGP_LPJ_P0097277 Cldn2 protein_coding protein_coding MGP_LPJ_T0097278.1 MGP_LPJ_G0036030.1 mouse_genomes_project X 138288641 138294595 + MGP_LPJ_P0097278 Cldn2 protein_coding protein_coding MGP_LPJ_T0097279.1 MGP_LPJ_G0036030.1 mouse_genomes_project X 138291935 138294983 + MGP_LPJ_P0097279 Cldn2 protein_coding protein_coding MGP_LPJ_T0102517.1 MGP_LPJ_G0040553.1 mouse_genomes_project X 133407265 133410627 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0016638.1 MGP_LPJ_G0014729.1 mouse_genomes_project X 115595120 115596895 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096237.1 MGP_LPJ_G0035721.1 mouse_genomes_project X 70750759 70782490 + MGP_LPJ_P0096237 Tktl1 protein_coding protein_coding MGP_LPJ_T0096238.1 MGP_LPJ_G0035721.1 mouse_genomes_project X 70750790 70771038 + MGP_LPJ_P0096238 Tktl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0016366.1 MGP_LPJ_G0014457.1 mouse_genomes_project X 66857128 66858052 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011243.1 MGP_LPJ_G0009361.1 mouse_genomes_project X 156234411 156234513 + Gm23798 miRNA miRNA MGP_LPJ_T0011183.1 MGP_LPJ_G0009301.1 mouse_genomes_project X 63162643 63162721 - Mir878 miRNA miRNA MGP_LPJ_T0096534.1 MGP_LPJ_G0035799.1 mouse_genomes_project X 90425011 90426949 + Arx protein_coding retained_intron MGP_LPJ_T0096535.1 MGP_LPJ_G0035799.1 mouse_genomes_project X 90425062 90436868 + MGP_LPJ_P0096535 Arx protein_coding protein_coding MGP_LPJ_T0096536.1 MGP_LPJ_G0035799.1 mouse_genomes_project X 90425076 90436573 + MGP_LPJ_P0096536 Arx protein_coding protein_coding MGP_LPJ_T0016735.1 MGP_LPJ_G0014826.1 mouse_genomes_project X 139840806 139841022 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011185.1 MGP_LPJ_G0009303.1 mouse_genomes_project X 63171563 63171640 - Mir871 miRNA miRNA MGP_LPJ_T0095542.1 MGP_LPJ_G0035504.1 mouse_genomes_project X 19078032 19108978 + MGP_LPJ_P0095542 Gm4907 protein_coding protein_coding MGP_LPJ_T0095543.1 MGP_LPJ_G0035504.1 mouse_genomes_project X 19091948 19108868 + MGP_LPJ_P0095543 Gm4907 protein_coding protein_coding MGP_LPJ_T0016162.1 MGP_LPJ_G0014253.1 mouse_genomes_project X 5997829 5998322 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011231.1 MGP_LPJ_G0009349.1 mouse_genomes_project X 143550343 143550414 + Mir3472 miRNA miRNA MGP_LPJ_T0096740.1 MGP_LPJ_G0035853.1 mouse_genomes_project X 98736042 98759474 + MGP_LPJ_P0096740 Med12 protein_coding protein_coding MGP_LPJ_T0096741.1 MGP_LPJ_G0035853.1 mouse_genomes_project X 98736241 98759474 + MGP_LPJ_P0096741 Med12 protein_coding protein_coding MGP_LPJ_T0096742.1 MGP_LPJ_G0035853.1 mouse_genomes_project X 98736272 98759474 + MGP_LPJ_P0096742 Med12 protein_coding protein_coding MGP_LPJ_T0096743.1 MGP_LPJ_G0035853.1 mouse_genomes_project X 98736272 98759474 + MGP_LPJ_P0096743 Med12 protein_coding protein_coding MGP_LPJ_T0096744.1 MGP_LPJ_G0035853.1 mouse_genomes_project X 98744704 98746166 + Med12 protein_coding retained_intron MGP_LPJ_T0096745.1 MGP_LPJ_G0035853.1 mouse_genomes_project X 98745194 98745937 + Med12 protein_coding processed_transcript MGP_LPJ_T0096746.1 MGP_LPJ_G0035853.1 mouse_genomes_project X 98748032 98759474 + Med12 protein_coding retained_intron MGP_LPJ_T0096747.1 MGP_LPJ_G0035853.1 mouse_genomes_project X 98755142 98758076 + Med12 protein_coding processed_transcript MGP_LPJ_T0096748.1 MGP_LPJ_G0035853.1 mouse_genomes_project X 98758577 98759396 + Med12 protein_coding processed_transcript MGP_LPJ_T0016244.1 MGP_LPJ_G0014335.1 mouse_genomes_project X 36646293 36647795 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016523.1 MGP_LPJ_G0014614.1 mouse_genomes_project X 97753868 97755023 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016390.1 MGP_LPJ_G0014481.1 mouse_genomes_project X 71912944 71914873 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016135.1 MGP_LPJ_G0014226.1 mouse_genomes_project X 685420 686011 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095802.1 MGP_LPJ_G0035592.1 mouse_genomes_project X 45263655 45264615 - MGP_LPJ_P0095802 Olfr1321 protein_coding protein_coding MGP_LPJ_T0095153.1 MGP_LPJ_G0035396.1 mouse_genomes_project X 1974623 1979164 - MGP_LPJ_P0095153 Usp27x protein_coding protein_coding MGP_LPJ_T0095154.1 MGP_LPJ_G0035396.1 mouse_genomes_project X 1975928 1979168 - MGP_LPJ_P0095154 Usp27x protein_coding protein_coding MGP_LPJ_T0009399.1 MGP_LPJ_G0007546.1 mouse_genomes_project X 58562087 58583621 - 1700019B21Rik lincRNA lincRNA MGP_LPJ_T0009400.1 MGP_LPJ_G0007546.1 mouse_genomes_project X 58562087 58567611 - 1700019B21Rik lincRNA lincRNA MGP_LPJ_T0016137.1 MGP_LPJ_G0014228.1 mouse_genomes_project X 1737049 1737480 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095904.1 MGP_LPJ_G0035634.1 mouse_genomes_project X 52990934 53011025 + MGP_LPJ_P0095904 Vgll1 protein_coding protein_coding MGP_LPJ_T0095905.1 MGP_LPJ_G0035634.1 mouse_genomes_project X 52992140 53010014 + MGP_LPJ_P0095905 Vgll1 protein_coding protein_coding MGP_LPJ_T0095906.1 MGP_LPJ_G0035634.1 mouse_genomes_project X 52992202 53011025 + MGP_LPJ_P0095906 Vgll1 protein_coding protein_coding MGP_LPJ_T0095907.1 MGP_LPJ_G0035634.1 mouse_genomes_project X 53004202 53006639 + MGP_LPJ_P0095907 Vgll1 protein_coding protein_coding MGP_LPJ_T0097341.1 MGP_LPJ_G0036050.1 mouse_genomes_project X 140675323 140688299 + MGP_LPJ_P0097341 Nxt2 protein_coding protein_coding MGP_LPJ_T0097342.1 MGP_LPJ_G0036050.1 mouse_genomes_project X 140676804 140678382 + Nxt2 protein_coding retained_intron MGP_LPJ_T0097343.1 MGP_LPJ_G0036050.1 mouse_genomes_project X 140676944 140688304 + MGP_LPJ_P0097343 Nxt2 protein_coding protein_coding MGP_LPJ_T0016780.1 MGP_LPJ_G0014871.1 mouse_genomes_project X 149162374 149162578 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101189.1 MGP_LPJ_G0039452.1 mouse_genomes_project X 133591821 133591935 - Gm22006 snoRNA snoRNA MGP_LPJ_T0016443.1 MGP_LPJ_G0014534.1 mouse_genomes_project X 83705295 83705605 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095596.1 MGP_LPJ_G0035526.1 mouse_genomes_project X 32561149 32562843 - MGP_LPJ_P0095596 Gm9 protein_coding protein_coding MGP_LPJ_T0101203.1 MGP_LPJ_G0039466.1 mouse_genomes_project X 157429625 157429776 + Gm22522 snoRNA snoRNA MGP_LPJ_T0098354.1 MGP_LPJ_G0036635.1 mouse_genomes_project X 100426684 100426785 - Gm26152 rRNA rRNA MGP_LPJ_T0101173.1 MGP_LPJ_G0039436.1 mouse_genomes_project X 90390037 90390170 + Gm23454 snoRNA snoRNA MGP_LPJ_T0102531.1 MGP_LPJ_G0040567.1 mouse_genomes_project X 169294455 169301929 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0096085.1 MGP_LPJ_G0035700.1 mouse_genomes_project X 70055250 70123201 + MGP_LPJ_P0096085 Atp2b3 protein_coding protein_coding MGP_LPJ_T0096086.1 MGP_LPJ_G0035700.1 mouse_genomes_project X 70055250 70110424 + MGP_LPJ_P0096086 Atp2b3 protein_coding protein_coding MGP_LPJ_T0096087.1 MGP_LPJ_G0035700.1 mouse_genomes_project X 70055250 70123201 + MGP_LPJ_P0096087 Atp2b3 protein_coding protein_coding MGP_LPJ_T0096088.1 MGP_LPJ_G0035700.1 mouse_genomes_project X 70055301 70112731 + MGP_LPJ_P0096088 Atp2b3 protein_coding unknown_likely_coding MGP_LPJ_T0016839.1 MGP_LPJ_G0014930.1 mouse_genomes_project X 159132402 159132900 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101187.1 MGP_LPJ_G0039450.1 mouse_genomes_project X 130570595 130570726 - Gm23768 snoRNA snoRNA MGP_LPJ_T0097837.1 MGP_LPJ_G0036167.1 mouse_genomes_project X 166541553 166567116 - MGP_LPJ_P0097837 Tlr7 protein_coding protein_coding MGP_LPJ_T0097838.1 MGP_LPJ_G0036167.1 mouse_genomes_project X 166541555 166567146 - MGP_LPJ_P0097838 Tlr7 protein_coding protein_coding MGP_LPJ_T0097839.1 MGP_LPJ_G0036167.1 mouse_genomes_project X 166541838 166567085 - MGP_LPJ_P0097839 Tlr7 protein_coding protein_coding MGP_LPJ_T0097840.1 MGP_LPJ_G0036167.1 mouse_genomes_project X 166544966 166567079 - MGP_LPJ_P0097840 Tlr7 protein_coding protein_coding MGP_LPJ_T0097841.1 MGP_LPJ_G0036167.1 mouse_genomes_project X 166544980 166567098 - MGP_LPJ_P0097841 Tlr7 protein_coding protein_coding MGP_LPJ_T0097842.1 MGP_LPJ_G0036167.1 mouse_genomes_project X 166554290 166567031 - Tlr7 protein_coding processed_transcript MGP_LPJ_T0095210.1 MGP_LPJ_G0035408.1 mouse_genomes_project X 2365688 2369130 + MGP_LPJ_P0095210 Praf2 protein_coding protein_coding MGP_LPJ_T0016656.1 MGP_LPJ_G0014747.1 mouse_genomes_project X 119734007 119734775 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096447.1 MGP_LPJ_G0035759.1 mouse_genomes_project X 73063623 73075513 + MGP_LPJ_P0096447 protein_coding protein_coding MGP_LPJ_T0095908.1 MGP_LPJ_G0035635.1 mouse_genomes_project X 53121869 53133405 + MGP_LPJ_P0095908 Cd40lg protein_coding protein_coding MGP_LPJ_T0016154.1 MGP_LPJ_G0014245.1 mouse_genomes_project X 3785496 3786159 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018562.1 MGP_LPJ_G0015692.1 mouse_genomes_project X 14300106 14310313 - Gm14636 processed_transcript processed_transcript MGP_LPJ_T0018563.1 MGP_LPJ_G0015692.1 mouse_genomes_project X 14305132 14310322 - Gm14636 processed_transcript processed_transcript MGP_LPJ_T0097344.1 MGP_LPJ_G0036051.1 mouse_genomes_project X 140761572 140763115 - MGP_LPJ_P0097344 Kcne1l protein_coding protein_coding MGP_LPJ_T0096606.1 MGP_LPJ_G0035818.1 mouse_genomes_project X 93069256 93295587 + Zc3h12b protein_coding processed_transcript MGP_LPJ_T0096607.1 MGP_LPJ_G0035818.1 mouse_genomes_project X 93261492 93298799 + MGP_LPJ_P0096607 Zc3h12b protein_coding protein_coding MGP_LPJ_T0096608.1 MGP_LPJ_G0035818.1 mouse_genomes_project X 93262302 93304158 + MGP_LPJ_P0096608 Zc3h12b protein_coding nonsense_mediated_decay MGP_LPJ_T0101205.1 MGP_LPJ_G0039468.1 mouse_genomes_project X 161945644 161945763 + Gm23786 snoRNA snoRNA MGP_LPJ_T0016647.1 MGP_LPJ_G0014738.1 mouse_genomes_project X 118110814 118111067 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009437.1 MGP_LPJ_G0007570.1 mouse_genomes_project X 131706056 131725606 + Gm26851 lincRNA lincRNA MGP_LPJ_T0016644.1 MGP_LPJ_G0014735.1 mouse_genomes_project X 117702175 117703465 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016395.1 MGP_LPJ_G0014486.1 mouse_genomes_project X 73020502 73021274 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016521.1 MGP_LPJ_G0014612.1 mouse_genomes_project X 97571014 97571336 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016131.1 MGP_LPJ_G0014222.1 mouse_genomes_project X 291289 293388 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018550.1 MGP_LPJ_G0015685.1 mouse_genomes_project X 1979262 1981380 + Gm14379 processed_transcript processed_transcript MGP_LPJ_T0005620.1 MGP_LPJ_G0004737.1 mouse_genomes_project X 72968176 72968760 - Gm14707 antisense antisense MGP_LPJ_T0016482.1 MGP_LPJ_G0014573.1 mouse_genomes_project X 91095219 91095490 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016286.1 MGP_LPJ_G0014377.1 mouse_genomes_project X 48326661 48326984 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016597.1 MGP_LPJ_G0014688.1 mouse_genomes_project X 108363451 108366080 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016734.1 MGP_LPJ_G0014825.1 mouse_genomes_project X 139762628 139763410 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095275.1 MGP_LPJ_G0035421.1 mouse_genomes_project X 2579839 2597606 - MGP_LPJ_P0095275 Hdac6 protein_coding protein_coding MGP_LPJ_T0095276.1 MGP_LPJ_G0035421.1 mouse_genomes_project X 2579841 2597606 - MGP_LPJ_P0095276 Hdac6 protein_coding protein_coding MGP_LPJ_T0095277.1 MGP_LPJ_G0035421.1 mouse_genomes_project X 2579843 2597555 - Hdac6 protein_coding retained_intron MGP_LPJ_T0095278.1 MGP_LPJ_G0035421.1 mouse_genomes_project X 2581078 2597606 - MGP_LPJ_P0095278 Hdac6 protein_coding protein_coding MGP_LPJ_T0095279.1 MGP_LPJ_G0035421.1 mouse_genomes_project X 2581274 2584205 - Hdac6 protein_coding retained_intron MGP_LPJ_T0095280.1 MGP_LPJ_G0035421.1 mouse_genomes_project X 2587028 2588379 - Hdac6 protein_coding retained_intron MGP_LPJ_T0095281.1 MGP_LPJ_G0035421.1 mouse_genomes_project X 2587135 2589671 - Hdac6 protein_coding retained_intron MGP_LPJ_T0095282.1 MGP_LPJ_G0035421.1 mouse_genomes_project X 2593100 2596876 - Hdac6 protein_coding retained_intron MGP_LPJ_T0095283.1 MGP_LPJ_G0035421.1 mouse_genomes_project X 2593124 2597270 - MGP_LPJ_P0095283 Hdac6 protein_coding protein_coding MGP_LPJ_T0095284.1 MGP_LPJ_G0035421.1 mouse_genomes_project X 2596695 2597484 - MGP_LPJ_P0095284 Hdac6 protein_coding protein_coding MGP_LPJ_T0096584.1 MGP_LPJ_G0035812.1 mouse_genomes_project X 91971647 91976944 + MGP_LPJ_P0096584 Zxdb protein_coding protein_coding MGP_LPJ_T0098350.1 MGP_LPJ_G0036631.1 mouse_genomes_project X 67596930 67597048 + n-R5s8 rRNA rRNA MGP_LPJ_T0097351.1 MGP_LPJ_G0036054.1 mouse_genomes_project X 141341989 141451136 - MGP_LPJ_P0097351 Ammecr1 protein_coding protein_coding MGP_LPJ_T0097710.1 MGP_LPJ_G0036132.1 mouse_genomes_project X 160881590 160943808 + MGP_LPJ_P0097710 Rai2 protein_coding protein_coding MGP_LPJ_T0097711.1 MGP_LPJ_G0036132.1 mouse_genomes_project X 160882148 160943810 + MGP_LPJ_P0097711 Rai2 protein_coding protein_coding MGP_LPJ_T0018586.1 MGP_LPJ_G0015699.1 mouse_genomes_project X 57099634 57103568 + C230004F18Rik processed_transcript processed_transcript MGP_LPJ_T0018587.1 MGP_LPJ_G0015699.1 mouse_genomes_project X 57099634 57159975 + C230004F18Rik processed_transcript processed_transcript MGP_LPJ_T0018588.1 MGP_LPJ_G0015699.1 mouse_genomes_project X 57099634 57117709 + C230004F18Rik processed_transcript processed_transcript MGP_LPJ_T0018589.1 MGP_LPJ_G0015699.1 mouse_genomes_project X 57099634 57123292 + C230004F18Rik processed_transcript processed_transcript MGP_LPJ_T0018590.1 MGP_LPJ_G0015699.1 mouse_genomes_project X 57099646 57159975 + C230004F18Rik processed_transcript processed_transcript MGP_LPJ_T0096459.1 MGP_LPJ_G0035767.1 mouse_genomes_project X 74585334 74590602 + MGP_LPJ_P0096459 protein_coding protein_coding MGP_LPJ_T0016688.1 MGP_LPJ_G0014779.1 mouse_genomes_project X 132611071 132611436 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005626.1 MGP_LPJ_G0004742.1 mouse_genomes_project X 96899319 96901048 + Gm14808 antisense antisense MGP_LPJ_T0095430.1 MGP_LPJ_G0035467.1 mouse_genomes_project X 11664944 11665765 + MGP_LPJ_P0095430 Cypt1 protein_coding protein_coding MGP_LPJ_T0095431.1 MGP_LPJ_G0035467.1 mouse_genomes_project X 11664947 11665764 + MGP_LPJ_P0095431 Cypt1 protein_coding protein_coding MGP_LPJ_T0016665.1 MGP_LPJ_G0014756.1 mouse_genomes_project X 124805015 124805270 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016144.1 MGP_LPJ_G0014235.1 mouse_genomes_project X 2688535 2689403 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095636.1 MGP_LPJ_G0035550.1 mouse_genomes_project X 33468301 33474598 + MGP_LPJ_P0095636 Rhox13 protein_coding protein_coding MGP_LPJ_T0016169.1 MGP_LPJ_G0014260.1 mouse_genomes_project X 7172218 7172568 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101426.1 MGP_LPJ_G0039596.1 mouse_genomes_project X 5368908 5370847 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101427.1 MGP_LPJ_G0039596.1 mouse_genomes_project X 5370251 5370742 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0095520.1 MGP_LPJ_G0035495.1 mouse_genomes_project X 16241755 16248633 + MGP_LPJ_P0095520 Spaca5 protein_coding protein_coding MGP_LPJ_T0097400.1 MGP_LPJ_G0036065.1 mouse_genomes_project X 145466449 145582510 + Htr2c protein_coding retained_intron MGP_LPJ_T0097401.1 MGP_LPJ_G0036065.1 mouse_genomes_project X 145466449 145494370 + Htr2c protein_coding retained_intron MGP_LPJ_T0097402.1 MGP_LPJ_G0036065.1 mouse_genomes_project X 145466566 145576975 + Htr2c protein_coding processed_transcript MGP_LPJ_T0097403.1 MGP_LPJ_G0036065.1 mouse_genomes_project X 145466644 145702716 + MGP_LPJ_P0097403 Htr2c protein_coding protein_coding MGP_LPJ_T0097404.1 MGP_LPJ_G0036065.1 mouse_genomes_project X 145466959 145686674 + MGP_LPJ_P0097404 Htr2c protein_coding protein_coding MGP_LPJ_T0011796.1 MGP_LPJ_G0009914.1 mouse_genomes_project X 151782323 151782624 - Gm26035 misc_RNA misc_RNA MGP_LPJ_T0102500.1 MGP_LPJ_G0040536.1 mouse_genomes_project X 74793996 74800723 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0099943.1 MGP_LPJ_G0038206.1 mouse_genomes_project X 156098412 156098576 + Gm22666 snRNA snRNA MGP_LPJ_T0095458.1 MGP_LPJ_G0035480.1 mouse_genomes_project X 15476853 15515103 + MGP_LPJ_P0095458 Rp2 protein_coding protein_coding MGP_LPJ_T0095459.1 MGP_LPJ_G0035480.1 mouse_genomes_project X 15476853 15515099 + MGP_LPJ_P0095459 Rp2 protein_coding protein_coding MGP_LPJ_T0095460.1 MGP_LPJ_G0035480.1 mouse_genomes_project X 15476931 15515099 + MGP_LPJ_P0095460 Rp2 protein_coding protein_coding MGP_LPJ_T0095461.1 MGP_LPJ_G0035480.1 mouse_genomes_project X 15476947 15520746 + MGP_LPJ_P0095461 Rp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0095462.1 MGP_LPJ_G0035480.1 mouse_genomes_project X 15476991 15520723 + MGP_LPJ_P0095462 Rp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0016388.1 MGP_LPJ_G0014479.1 mouse_genomes_project X 71446083 71448409 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096525.1 MGP_LPJ_G0035791.1 mouse_genomes_project X 86747229 86750453 + MGP_LPJ_P0096525 4932429P05Rik protein_coding protein_coding MGP_LPJ_T0101178.1 MGP_LPJ_G0039441.1 mouse_genomes_project X 111530071 111530195 - Gm23985 snoRNA snoRNA MGP_LPJ_T0011132.1 MGP_LPJ_G0009250.1 mouse_genomes_project X 685676 685756 + Gm27360 miRNA miRNA MGP_LPJ_T0018566.1 MGP_LPJ_G0015694.1 mouse_genomes_project X 35432410 35861624 + processed_transcript processed_transcript MGP_LPJ_T0011221.1 MGP_LPJ_G0009339.1 mouse_genomes_project X 128819128 128819246 - Gm26209 miRNA miRNA MGP_LPJ_T0096491.1 MGP_LPJ_G0035781.1 mouse_genomes_project X 80304834 80306081 - MGP_LPJ_P0096491 Tsga8 protein_coding protein_coding MGP_LPJ_T0096681.1 MGP_LPJ_G0035836.1 mouse_genomes_project X 97855517 97856390 + MGP_LPJ_P0096681 Otud6a protein_coding protein_coding MGP_LPJ_T0016273.1 MGP_LPJ_G0014364.1 mouse_genomes_project X 43807259 43807607 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099920.1 MGP_LPJ_G0038183.1 mouse_genomes_project X 106867040 106867207 - Gm23322 snRNA snRNA MGP_LPJ_T0016354.1 MGP_LPJ_G0014445.1 mouse_genomes_project X 64121094 64121657 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102483.1 MGP_LPJ_G0040519.1 mouse_genomes_project X 33065157 33065615 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0011789.1 MGP_LPJ_G0009907.1 mouse_genomes_project X 131395667 131396003 - Gm22552 misc_RNA misc_RNA MGP_LPJ_T0011179.1 MGP_LPJ_G0009297.1 mouse_genomes_project X 63153759 63153826 - Mir471 miRNA miRNA MGP_LPJ_T0011224.1 MGP_LPJ_G0009342.1 mouse_genomes_project X 134008624 134008678 + Mir7646 miRNA miRNA MGP_LPJ_T0016744.1 MGP_LPJ_G0014835.1 mouse_genomes_project X 140506250 140506610 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011175.1 MGP_LPJ_G0009293.1 mouse_genomes_project X 63138836 63138913 - Mir743b miRNA miRNA MGP_LPJ_T0016573.1 MGP_LPJ_G0014664.1 mouse_genomes_project X 103424283 103424670 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101208.1 MGP_LPJ_G0039471.1 mouse_genomes_project X 168992791 168992910 - Gm25651 snoRNA snoRNA MGP_LPJ_T0095463.1 MGP_LPJ_G0035481.1 mouse_genomes_project X 15540410 15635801 + MGP_LPJ_P0095463 Jade3 protein_coding unknown_likely_coding MGP_LPJ_T0095464.1 MGP_LPJ_G0035481.1 mouse_genomes_project X 15541805 15637844 + MGP_LPJ_P0095464 Jade3 protein_coding protein_coding MGP_LPJ_T0095465.1 MGP_LPJ_G0035481.1 mouse_genomes_project X 15541905 15612157 + Jade3 protein_coding retained_intron MGP_LPJ_T0095466.1 MGP_LPJ_G0035481.1 mouse_genomes_project X 15576399 15635801 + MGP_LPJ_P0095466 Jade3 protein_coding protein_coding MGP_LPJ_T0011170.1 MGP_LPJ_G0009288.1 mouse_genomes_project X 55051419 55051498 - Mir504 miRNA miRNA MGP_LPJ_T0016689.1 MGP_LPJ_G0014780.1 mouse_genomes_project X 132671242 132672569 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011198.1 MGP_LPJ_G0009316.1 mouse_genomes_project X 69144164 69144244 - Mir105 miRNA miRNA MGP_LPJ_T0016326.1 MGP_LPJ_G0014417.1 mouse_genomes_project X 57618461 57618896 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095837.1 MGP_LPJ_G0035606.1 mouse_genomes_project X 48336894 48345163 + MGP_LPJ_P0095837 Ccdc160 protein_coding protein_coding MGP_LPJ_T0016422.1 MGP_LPJ_G0014513.1 mouse_genomes_project X 77413052 77413277 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016564.1 MGP_LPJ_G0014655.1 mouse_genomes_project X 102078566 102079031 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002504.1 MGP_LPJ_G0002410.1 mouse_genomes_project X 101456310 101458322 - TEC TEC MGP_LPJ_T0016499.1 MGP_LPJ_G0014590.1 mouse_genomes_project X 92327725 92328970 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016747.1 MGP_LPJ_G0014838.1 mouse_genomes_project X 140876116 140876607 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016379.1 MGP_LPJ_G0014470.1 mouse_genomes_project X 70857356 70857572 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095528.1 MGP_LPJ_G0035499.1 mouse_genomes_project X 16675596 16680217 + MGP_LPJ_P0095528 Agtr2 protein_coding protein_coding MGP_LPJ_T0095529.1 MGP_LPJ_G0035499.1 mouse_genomes_project X 16675774 16677356 + Agtr2 protein_coding processed_transcript MGP_LPJ_T0095326.1 MGP_LPJ_G0035431.1 mouse_genomes_project X 2911965 2925656 - MGP_LPJ_P0095326 Ftsj1 protein_coding protein_coding MGP_LPJ_T0095327.1 MGP_LPJ_G0035431.1 mouse_genomes_project X 2913723 2925560 - MGP_LPJ_P0095327 Ftsj1 protein_coding protein_coding MGP_LPJ_T0095328.1 MGP_LPJ_G0035431.1 mouse_genomes_project X 2913723 2925645 - MGP_LPJ_P0095328 Ftsj1 protein_coding protein_coding MGP_LPJ_T0095329.1 MGP_LPJ_G0035431.1 mouse_genomes_project X 2917899 2925458 - Ftsj1 protein_coding retained_intron MGP_LPJ_T0095330.1 MGP_LPJ_G0035431.1 mouse_genomes_project X 2918196 2919611 - MGP_LPJ_P0095330 Ftsj1 protein_coding protein_coding MGP_LPJ_T0095331.1 MGP_LPJ_G0035431.1 mouse_genomes_project X 2918227 2919087 - Ftsj1 protein_coding processed_transcript MGP_LPJ_T0095332.1 MGP_LPJ_G0035431.1 mouse_genomes_project X 2921776 2925613 - Ftsj1 protein_coding retained_intron MGP_LPJ_T0016524.1 MGP_LPJ_G0014615.1 mouse_genomes_project X 98026436 98026836 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016448.1 MGP_LPJ_G0014539.1 mouse_genomes_project X 85355673 85355984 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016178.1 MGP_LPJ_G0014269.1 mouse_genomes_project X 8412439 8413252 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096850.1 MGP_LPJ_G0035884.1 mouse_genomes_project X 101083776 101147576 + MGP_LPJ_P0096850 Gm26992 protein_coding protein_coding MGP_LPJ_T0016538.1 MGP_LPJ_G0014629.1 mouse_genomes_project X 100569816 100570574 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095987.1 MGP_LPJ_G0035664.1 mouse_genomes_project X 66346897 66347576 + MGP_LPJ_P0095987 protein_coding protein_coding MGP_LPJ_T0016216.1 MGP_LPJ_G0014307.1 mouse_genomes_project X 19053422 19054638 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101453.1 MGP_LPJ_G0039613.1 mouse_genomes_project X 151309094 151311294 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101454.1 MGP_LPJ_G0039613.1 mouse_genomes_project X 151309379 151310521 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0095922.1 MGP_LPJ_G0035639.1 mouse_genomes_project X 53413951 53421066 - MGP_LPJ_P0095922 Gpr101 protein_coding protein_coding MGP_LPJ_T0016141.1 MGP_LPJ_G0014232.1 mouse_genomes_project X 2300676 2301080 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099934.1 MGP_LPJ_G0038197.1 mouse_genomes_project X 139190516 139190623 + Gm23199 snRNA snRNA MGP_LPJ_T0096754.1 MGP_LPJ_G0035855.1 mouse_genomes_project X 98840674 98849921 + MGP_LPJ_P0096754 Gjb1 protein_coding protein_coding MGP_LPJ_T0096755.1 MGP_LPJ_G0035855.1 mouse_genomes_project X 98841569 98849921 + MGP_LPJ_P0096755 Gjb1 protein_coding protein_coding MGP_LPJ_T0096756.1 MGP_LPJ_G0035855.1 mouse_genomes_project X 98848027 98849921 + MGP_LPJ_P0096756 Gjb1 protein_coding protein_coding MGP_LPJ_T0097026.1 MGP_LPJ_G0035944.1 mouse_genomes_project X 118041473 118694728 + MGP_LPJ_P0097026 Pcdh11x protein_coding protein_coding MGP_LPJ_T0097027.1 MGP_LPJ_G0035944.1 mouse_genomes_project X 118041473 118694728 + MGP_LPJ_P0097027 Pcdh11x protein_coding protein_coding MGP_LPJ_T0097028.1 MGP_LPJ_G0035944.1 mouse_genomes_project X 118041541 118043686 + Pcdh11x protein_coding retained_intron MGP_LPJ_T0097029.1 MGP_LPJ_G0035944.1 mouse_genomes_project X 118041541 118699055 + MGP_LPJ_P0097029 Pcdh11x protein_coding protein_coding MGP_LPJ_T0097030.1 MGP_LPJ_G0035944.1 mouse_genomes_project X 118041617 118694728 + MGP_LPJ_P0097030 Pcdh11x protein_coding nonsense_mediated_decay MGP_LPJ_T0097032.1 MGP_LPJ_G0035944.1 mouse_genomes_project X 118127433 118699043 + MGP_LPJ_P0097032 Pcdh11x protein_coding protein_coding MGP_LPJ_T0097033.1 MGP_LPJ_G0035944.1 mouse_genomes_project X 118128206 118168215 + MGP_LPJ_P0097033 Pcdh11x protein_coding protein_coding MGP_LPJ_T0097034.1 MGP_LPJ_G0035944.1 mouse_genomes_project X 118157984 118694728 + MGP_LPJ_P0097034 Pcdh11x protein_coding protein_coding MGP_LPJ_T0097035.1 MGP_LPJ_G0035944.1 mouse_genomes_project X 118157984 118694726 + MGP_LPJ_P0097035 Pcdh11x protein_coding nonsense_mediated_decay MGP_LPJ_T0016416.1 MGP_LPJ_G0014507.1 mouse_genomes_project X 75715677 75715899 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016678.1 MGP_LPJ_G0014769.1 mouse_genomes_project X 129531804 129533307 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095746.1 MGP_LPJ_G0035577.1 mouse_genomes_project X 43646282 43661407 + MGP_LPJ_P0095746 Sash3 protein_coding protein_coding MGP_LPJ_T0095747.1 MGP_LPJ_G0035577.1 mouse_genomes_project X 43646507 43660098 + MGP_LPJ_P0095747 Sash3 protein_coding unknown_likely_coding MGP_LPJ_T0102485.1 MGP_LPJ_G0040521.1 mouse_genomes_project X 33252298 33257083 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0096858.1 MGP_LPJ_G0035888.1 mouse_genomes_project X 101765564 101885825 - MGP_LPJ_P0096858 C77370 protein_coding protein_coding MGP_LPJ_T0096859.1 MGP_LPJ_G0035888.1 mouse_genomes_project X 101765565 101885757 - MGP_LPJ_P0096859 C77370 protein_coding protein_coding MGP_LPJ_T0096860.1 MGP_LPJ_G0035888.1 mouse_genomes_project X 101773158 101885784 - MGP_LPJ_P0096860 C77370 protein_coding protein_coding MGP_LPJ_T0011223.1 MGP_LPJ_G0009341.1 mouse_genomes_project X 132836719 132836820 + Mir7093 miRNA miRNA MGP_LPJ_T0011797.1 MGP_LPJ_G0009915.1 mouse_genomes_project X 161459174 161459448 - Gm23867 misc_RNA misc_RNA MGP_LPJ_T0099931.1 MGP_LPJ_G0038194.1 mouse_genomes_project X 132553156 132553263 + Gm23124 snRNA snRNA MGP_LPJ_T0095449.1 MGP_LPJ_G0035476.1 mouse_genomes_project X 13591424 13637779 - 4930578C19Rik protein_coding processed_transcript MGP_LPJ_T0095450.1 MGP_LPJ_G0035476.1 mouse_genomes_project X 13594970 13637753 - MGP_LPJ_P0095450 4930578C19Rik protein_coding protein_coding MGP_LPJ_T0016710.1 MGP_LPJ_G0014801.1 mouse_genomes_project X 135315938 135317060 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099949.1 MGP_LPJ_G0038212.1 mouse_genomes_project X 163488885 163488991 - Gm25367 snRNA snRNA MGP_LPJ_T0016247.1 MGP_LPJ_G0014338.1 mouse_genomes_project X 37121301 37122608 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096813.1 MGP_LPJ_G0035868.1 mouse_genomes_project X 99685943 99692783 - MGP_LPJ_P0096813 Rps4x protein_coding protein_coding MGP_LPJ_T0096814.1 MGP_LPJ_G0035868.1 mouse_genomes_project X 99686076 99690126 - Rps4x protein_coding retained_intron MGP_LPJ_T0096816.1 MGP_LPJ_G0035868.1 mouse_genomes_project X 99691015 99692725 - Rps4x protein_coding retained_intron MGP_LPJ_T0097170.1 MGP_LPJ_G0035991.1 mouse_genomes_project X 134004641 134009231 + MGP_LPJ_P0097170 Armcx5 protein_coding protein_coding MGP_LPJ_T0097175.1 MGP_LPJ_G0035991.1 mouse_genomes_project X 134004643 134007315 + Armcx5 protein_coding retained_intron MGP_LPJ_T0096061.1 MGP_LPJ_G0035689.1 mouse_genomes_project X 69583184 69589247 - MGP_LPJ_P0096061 Pnma5 protein_coding protein_coding MGP_LPJ_T0096062.1 MGP_LPJ_G0035689.1 mouse_genomes_project X 69583191 69588247 - MGP_LPJ_P0096062 Pnma5 protein_coding protein_coding MGP_LPJ_T0096063.1 MGP_LPJ_G0035689.1 mouse_genomes_project X 69583522 69589247 - MGP_LPJ_P0096063 Pnma5 protein_coding protein_coding MGP_LPJ_T0097769.1 MGP_LPJ_G0036148.1 mouse_genomes_project X 163409957 163475711 - MGP_LPJ_P0097769 Bmx protein_coding protein_coding MGP_LPJ_T0097770.1 MGP_LPJ_G0036148.1 mouse_genomes_project X 163410470 163467898 - MGP_LPJ_P0097770 Bmx protein_coding protein_coding MGP_LPJ_T0016193.1 MGP_LPJ_G0014284.1 mouse_genomes_project X 14062447 14062853 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095177.1 MGP_LPJ_G0035401.1 mouse_genomes_project X 2252794 2267495 + MGP_LPJ_P0095177 Syp protein_coding protein_coding MGP_LPJ_T0095178.1 MGP_LPJ_G0035401.1 mouse_genomes_project X 2252961 2261623 + Syp protein_coding retained_intron MGP_LPJ_T0095179.1 MGP_LPJ_G0035401.1 mouse_genomes_project X 2253045 2258548 + MGP_LPJ_P0095179 Syp protein_coding protein_coding MGP_LPJ_T0095180.1 MGP_LPJ_G0035401.1 mouse_genomes_project X 2253628 2258537 + Syp protein_coding processed_transcript MGP_LPJ_T0095181.1 MGP_LPJ_G0035401.1 mouse_genomes_project X 2254084 2258496 + Syp protein_coding retained_intron MGP_LPJ_T0095182.1 MGP_LPJ_G0035401.1 mouse_genomes_project X 2258162 2259287 + Syp protein_coding retained_intron MGP_LPJ_T0016854.1 MGP_LPJ_G0014945.1 mouse_genomes_project X 162419481 162419969 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016348.1 MGP_LPJ_G0014439.1 mouse_genomes_project X 63140022 63140433 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101168.1 MGP_LPJ_G0039431.1 mouse_genomes_project X 73574879 73575018 + Gm23280 snoRNA snoRNA MGP_LPJ_T0011184.1 MGP_LPJ_G0009302.1 mouse_genomes_project X 63163079 63163157 - Mir881 miRNA miRNA MGP_LPJ_T0096127.1 MGP_LPJ_G0035709.1 mouse_genomes_project X 70344892 70348689 + MGP_LPJ_P0096127 Ssr4 protein_coding protein_coding MGP_LPJ_T0096128.1 MGP_LPJ_G0035709.1 mouse_genomes_project X 70344926 70348691 + MGP_LPJ_P0096128 Ssr4 protein_coding protein_coding MGP_LPJ_T0096129.1 MGP_LPJ_G0035709.1 mouse_genomes_project X 70345046 70346957 + Ssr4 protein_coding retained_intron MGP_LPJ_T0096130.1 MGP_LPJ_G0035709.1 mouse_genomes_project X 70345048 70348197 + Ssr4 protein_coding retained_intron MGP_LPJ_T0096131.1 MGP_LPJ_G0035709.1 mouse_genomes_project X 70345048 70348691 + Ssr4 protein_coding retained_intron MGP_LPJ_T0096132.1 MGP_LPJ_G0035709.1 mouse_genomes_project X 70345088 70348676 + Ssr4 protein_coding retained_intron MGP_LPJ_T0096133.1 MGP_LPJ_G0035709.1 mouse_genomes_project X 70345129 70348028 + Ssr4 protein_coding retained_intron MGP_LPJ_T0096134.1 MGP_LPJ_G0035709.1 mouse_genomes_project X 70346708 70348695 + Ssr4 protein_coding retained_intron MGP_LPJ_T0011156.1 MGP_LPJ_G0009274.1 mouse_genomes_project X 48282885 48282960 - Mir363 miRNA miRNA MGP_LPJ_T0096074.1 MGP_LPJ_G0035698.1 mouse_genomes_project X 69992402 70014019 - MGP_LPJ_P0096074 Haus7 protein_coding protein_coding MGP_LPJ_T0096075.1 MGP_LPJ_G0035698.1 mouse_genomes_project X 69992402 70014019 - MGP_LPJ_P0096075 Haus7 protein_coding protein_coding MGP_LPJ_T0096076.1 MGP_LPJ_G0035698.1 mouse_genomes_project X 69992404 70002455 - Haus7 protein_coding processed_transcript MGP_LPJ_T0016855.1 MGP_LPJ_G0014946.1 mouse_genomes_project X 162485134 162485600 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016190.1 MGP_LPJ_G0014281.1 mouse_genomes_project X 12419907 12422240 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099876.1 MGP_LPJ_G0038139.1 mouse_genomes_project X 9381576 9381767 - Gm25202 snRNA snRNA MGP_LPJ_T0097569.1 MGP_LPJ_G0036091.1 mouse_genomes_project X 151878133 151881083 + MGP_LPJ_P0097569 Usp51 protein_coding protein_coding MGP_LPJ_T0098355.1 MGP_LPJ_G0036636.1 mouse_genomes_project X 134571199 134571318 + n-R5s12 rRNA rRNA MGP_LPJ_T0016262.1 MGP_LPJ_G0014353.1 mouse_genomes_project X 40777046 40778949 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016492.1 MGP_LPJ_G0014583.1 mouse_genomes_project X 91788322 91788731 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016170.1 MGP_LPJ_G0014261.1 mouse_genomes_project X 7458683 7459028 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097868.1 MGP_LPJ_G0036174.1 mouse_genomes_project X 169081463 169084976 - MGP_LPJ_P0097868 4933400A11Rik protein_coding protein_coding MGP_LPJ_T0097869.1 MGP_LPJ_G0036174.1 mouse_genomes_project X 169081584 169085019 - MGP_LPJ_P0097869 4933400A11Rik protein_coding protein_coding MGP_LPJ_T0097870.1 MGP_LPJ_G0036174.1 mouse_genomes_project X 169081631 169084941 - MGP_LPJ_P0097870 4933400A11Rik protein_coding protein_coding MGP_LPJ_T0097339.1 MGP_LPJ_G0036049.1 mouse_genomes_project X 140530020 140645561 - MGP_LPJ_P0097339 Gucy2f protein_coding protein_coding MGP_LPJ_T0097340.1 MGP_LPJ_G0036049.1 mouse_genomes_project X 140537715 140638480 - MGP_LPJ_P0097340 Gucy2f protein_coding unknown_likely_coding MGP_LPJ_T0016856.1 MGP_LPJ_G0014947.1 mouse_genomes_project X 162543340 162543810 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095816.1 MGP_LPJ_G0035598.1 mouse_genomes_project X 46385694 46436265 - MGP_LPJ_P0095816 Frmd7 protein_coding protein_coding MGP_LPJ_T0095817.1 MGP_LPJ_G0035598.1 mouse_genomes_project X 46385694 46436265 - MGP_LPJ_P0095817 Frmd7 protein_coding nonsense_mediated_decay MGP_LPJ_T0095818.1 MGP_LPJ_G0035598.1 mouse_genomes_project X 46385694 46436265 - MGP_LPJ_P0095818 Frmd7 protein_coding unknown_likely_coding MGP_LPJ_T0102486.1 MGP_LPJ_G0040522.1 mouse_genomes_project X 33430845 33431078 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0016606.1 MGP_LPJ_G0014697.1 mouse_genomes_project X 110397702 110399326 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016407.1 MGP_LPJ_G0014498.1 mouse_genomes_project X 75064108 75064421 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011783.1 MGP_LPJ_G0009901.1 mouse_genomes_project X 101288762 101288889 + Gm27285 misc_RNA misc_RNA MGP_LPJ_T0011188.1 MGP_LPJ_G0009306.1 mouse_genomes_project X 63191429 63191508 - Mir465b-2 miRNA miRNA MGP_LPJ_T0016581.1 MGP_LPJ_G0014672.1 mouse_genomes_project X 104579046 104579338 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096846.1 MGP_LPJ_G0035880.1 mouse_genomes_project X 100864234 100865304 + MGP_LPJ_P0096846 1700029P11Rik protein_coding protein_coding MGP_LPJ_T0097681.1 MGP_LPJ_G0036126.1 mouse_genomes_project X 159611868 159638274 + MGP_LPJ_P0097681 Phka2 protein_coding protein_coding MGP_LPJ_T0097682.1 MGP_LPJ_G0036126.1 mouse_genomes_project X 159612130 159640310 + Phka2 protein_coding retained_intron MGP_LPJ_T0097683.1 MGP_LPJ_G0036126.1 mouse_genomes_project X 159612130 159707085 + MGP_LPJ_P0097683 Phka2 protein_coding protein_coding MGP_LPJ_T0097684.1 MGP_LPJ_G0036126.1 mouse_genomes_project X 159612161 159667191 + MGP_LPJ_P0097684 Phka2 protein_coding protein_coding MGP_LPJ_T0097685.1 MGP_LPJ_G0036126.1 mouse_genomes_project X 159612508 159699689 + MGP_LPJ_P0097685 Phka2 protein_coding protein_coding MGP_LPJ_T0097686.1 MGP_LPJ_G0036126.1 mouse_genomes_project X 159633845 159649725 + Phka2 protein_coding processed_transcript MGP_LPJ_T0097687.1 MGP_LPJ_G0036126.1 mouse_genomes_project X 159633855 159649720 + Phka2 protein_coding processed_transcript MGP_LPJ_T0097688.1 MGP_LPJ_G0036126.1 mouse_genomes_project X 159641391 159699721 + Phka2 protein_coding processed_transcript MGP_LPJ_T0097689.1 MGP_LPJ_G0036126.1 mouse_genomes_project X 159666022 159670985 + Phka2 protein_coding processed_transcript MGP_LPJ_T0016798.1 MGP_LPJ_G0014889.1 mouse_genomes_project X 152098493 152098767 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097871.1 MGP_LPJ_G0036175.1 mouse_genomes_project X 169188703 169302911 + MGP_LPJ_P0097871 Mid1 protein_coding protein_coding MGP_LPJ_T0097872.1 MGP_LPJ_G0036175.1 mouse_genomes_project X 169241159 169290571 + Mid1 protein_coding processed_transcript MGP_LPJ_T0097873.1 MGP_LPJ_G0036175.1 mouse_genomes_project X 169288196 169300793 + Mid1 protein_coding processed_transcript MGP_LPJ_T0097874.1 MGP_LPJ_G0036175.1 mouse_genomes_project X 169288196 169300793 + Mid1 protein_coding processed_transcript MGP_LPJ_T0097875.1 MGP_LPJ_G0036175.1 mouse_genomes_project X 169290570 169300793 + Mid1 protein_coding processed_transcript MGP_LPJ_T0097876.1 MGP_LPJ_G0036175.1 mouse_genomes_project X 169290570 169300794 + Mid1 protein_coding processed_transcript MGP_LPJ_T0097877.1 MGP_LPJ_G0036175.1 mouse_genomes_project X 169290570 169300793 + Mid1 protein_coding processed_transcript MGP_LPJ_T0097878.1 MGP_LPJ_G0036175.1 mouse_genomes_project X 169290570 169300793 + Mid1 protein_coding processed_transcript MGP_LPJ_T0097879.1 MGP_LPJ_G0036175.1 mouse_genomes_project X 169294455 169302877 + MGP_LPJ_P0097879 Mid1 protein_coding unknown_likely_coding MGP_LPJ_T0097744.1 MGP_LPJ_G0036140.1 mouse_genomes_project X 162734957 162771372 - MGP_LPJ_P0097744 Grpr protein_coding protein_coding MGP_LPJ_T0095858.1 MGP_LPJ_G0035615.1 mouse_genomes_project X 49246049 49246450 + MGP_LPJ_P0095858 Cxx1c protein_coding protein_coding MGP_LPJ_T0016235.1 MGP_LPJ_G0014326.1 mouse_genomes_project X 35127785 35128176 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095962.1 MGP_LPJ_G0035656.1 mouse_genomes_project X 62662575 62663439 - MGP_LPJ_P0095962 4930447F04Rik protein_coding protein_coding MGP_LPJ_T0095990.1 MGP_LPJ_G0035666.1 mouse_genomes_project X 66767280 66770820 + MGP_LPJ_P0095990 1110012L19Rik protein_coding protein_coding MGP_LPJ_T0016506.1 MGP_LPJ_G0014597.1 mouse_genomes_project X 93734447 93735425 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016740.1 MGP_LPJ_G0014831.1 mouse_genomes_project X 140306605 140306872 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097267.1 MGP_LPJ_G0036026.1 mouse_genomes_project X 137954323 138030307 + MGP_LPJ_P0097267 D330045A20Rik protein_coding protein_coding MGP_LPJ_T0097268.1 MGP_LPJ_G0036026.1 mouse_genomes_project X 137954327 137969595 + D330045A20Rik protein_coding processed_transcript MGP_LPJ_T0097269.1 MGP_LPJ_G0036026.1 mouse_genomes_project X 137954327 138030307 + MGP_LPJ_P0097269 D330045A20Rik protein_coding protein_coding MGP_LPJ_T0016245.1 MGP_LPJ_G0014336.1 mouse_genomes_project X 36763726 36763982 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016607.1 MGP_LPJ_G0014698.1 mouse_genomes_project X 110412597 110413576 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009404.1 MGP_LPJ_G0007550.1 mouse_genomes_project X 72584613 72595935 - Gm14715 lincRNA lincRNA MGP_LPJ_T0011230.1 MGP_LPJ_G0009348.1 mouse_genomes_project X 142336146 142336289 - miRNA miRNA MGP_LPJ_T0097560.1 MGP_LPJ_G0036089.1 mouse_genomes_project X 151475062 151629229 - MGP_LPJ_P0097560 Shroom2 protein_coding protein_coding MGP_LPJ_T0097561.1 MGP_LPJ_G0036089.1 mouse_genomes_project X 151475545 151507291 - Shroom2 protein_coding processed_transcript MGP_LPJ_T0097562.1 MGP_LPJ_G0036089.1 mouse_genomes_project X 151475545 151629233 - MGP_LPJ_P0097562 Shroom2 protein_coding protein_coding MGP_LPJ_T0097563.1 MGP_LPJ_G0036089.1 mouse_genomes_project X 151478081 151535766 - Shroom2 protein_coding processed_transcript MGP_LPJ_T0097564.1 MGP_LPJ_G0036089.1 mouse_genomes_project X 151484442 151506672 - Shroom2 protein_coding processed_transcript MGP_LPJ_T0097565.1 MGP_LPJ_G0036089.1 mouse_genomes_project X 151484651 151506858 - Shroom2 protein_coding processed_transcript MGP_LPJ_T0097303.1 MGP_LPJ_G0036035.1 mouse_genomes_project X 138830745 138930335 + MGP_LPJ_P0097303 Frmpd3 protein_coding unknown_likely_coding MGP_LPJ_T0097304.1 MGP_LPJ_G0036035.1 mouse_genomes_project X 138861240 138887644 + MGP_LPJ_P0097304 Frmpd3 protein_coding protein_coding MGP_LPJ_T0097305.1 MGP_LPJ_G0036035.1 mouse_genomes_project X 138875717 138888289 + MGP_LPJ_P0097305 Frmpd3 protein_coding protein_coding MGP_LPJ_T0096358.1 MGP_LPJ_G0035736.1 mouse_genomes_project X 70987700 71009894 - MGP_LPJ_P0096358 G6pdx protein_coding protein_coding MGP_LPJ_T0096359.1 MGP_LPJ_G0035736.1 mouse_genomes_project X 70989076 71009576 - MGP_LPJ_P0096359 G6pdx protein_coding protein_coding MGP_LPJ_T0096360.1 MGP_LPJ_G0035736.1 mouse_genomes_project X 70992022 71009549 - G6pdx protein_coding processed_transcript MGP_LPJ_T0096367.1 MGP_LPJ_G0035736.1 mouse_genomes_project X 71008386 71009580 - G6pdx protein_coding retained_intron MGP_LPJ_T0096544.1 MGP_LPJ_G0035802.1 mouse_genomes_project X 90919834 90990155 - MGP_LPJ_P0096544 Pdk3 protein_coding protein_coding MGP_LPJ_T0096545.1 MGP_LPJ_G0035802.1 mouse_genomes_project X 90920440 90924510 - Pdk3 protein_coding processed_transcript MGP_LPJ_T0096546.1 MGP_LPJ_G0035802.1 mouse_genomes_project X 90938171 90945469 - Pdk3 protein_coding processed_transcript MGP_LPJ_T0095810.1 MGP_LPJ_G0035595.1 mouse_genomes_project X 45535157 45536087 - MGP_LPJ_P0095810 Olfr1323 protein_coding protein_coding MGP_LPJ_T0016396.1 MGP_LPJ_G0014487.1 mouse_genomes_project X 73088160 73088464 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096270.1 MGP_LPJ_G0035725.1 mouse_genomes_project X 70851162 70860443 - MGP_LPJ_P0096270 Dnase1l1 protein_coding protein_coding MGP_LPJ_T0096271.1 MGP_LPJ_G0035725.1 mouse_genomes_project X 70851163 70861044 - MGP_LPJ_P0096271 Dnase1l1 protein_coding protein_coding MGP_LPJ_T0096272.1 MGP_LPJ_G0035725.1 mouse_genomes_project X 70851264 70860305 - MGP_LPJ_P0096272 Dnase1l1 protein_coding protein_coding MGP_LPJ_T0096273.1 MGP_LPJ_G0035725.1 mouse_genomes_project X 70851918 70860382 - MGP_LPJ_P0096273 Dnase1l1 protein_coding protein_coding MGP_LPJ_T0096274.1 MGP_LPJ_G0035725.1 mouse_genomes_project X 70852313 70855527 - Dnase1l1 protein_coding retained_intron MGP_LPJ_T0096275.1 MGP_LPJ_G0035725.1 mouse_genomes_project X 70855465 70860333 - Dnase1l1 protein_coding retained_intron MGP_LPJ_T0095473.1 MGP_LPJ_G0035485.1 mouse_genomes_project X 15796170 15822552 + MGP_LPJ_P0095473 Uba1 protein_coding protein_coding MGP_LPJ_T0095474.1 MGP_LPJ_G0035485.1 mouse_genomes_project X 15796265 15809048 + Uba1 protein_coding processed_transcript MGP_LPJ_T0095475.1 MGP_LPJ_G0035485.1 mouse_genomes_project X 15797271 15807962 + Uba1 protein_coding processed_transcript MGP_LPJ_T0095476.1 MGP_LPJ_G0035485.1 mouse_genomes_project X 15801642 15822552 + MGP_LPJ_P0095476 Uba1 protein_coding protein_coding MGP_LPJ_T0095477.1 MGP_LPJ_G0035485.1 mouse_genomes_project X 15816821 15820573 + Uba1 protein_coding processed_transcript MGP_LPJ_T0095478.1 MGP_LPJ_G0035485.1 mouse_genomes_project X 15819967 15821578 + Uba1 protein_coding processed_transcript MGP_LPJ_T0098353.1 MGP_LPJ_G0036634.1 mouse_genomes_project X 83324334 83324453 - n-R5s10 rRNA rRNA MGP_LPJ_T0095211.1 MGP_LPJ_G0035409.1 mouse_genomes_project X 2369779 2379408 - MGP_LPJ_P0095211 Ccdc120 protein_coding protein_coding MGP_LPJ_T0095212.1 MGP_LPJ_G0035409.1 mouse_genomes_project X 2376026 2378277 - MGP_LPJ_P0095212 Ccdc120 protein_coding protein_coding MGP_LPJ_T0095213.1 MGP_LPJ_G0035409.1 mouse_genomes_project X 2376283 2379375 - Ccdc120 protein_coding processed_transcript MGP_LPJ_T0095214.1 MGP_LPJ_G0035409.1 mouse_genomes_project X 2376297 2378298 - Ccdc120 protein_coding processed_transcript MGP_LPJ_T0095215.1 MGP_LPJ_G0035409.1 mouse_genomes_project X 2376308 2379391 - Ccdc120 protein_coding processed_transcript MGP_LPJ_T0095216.1 MGP_LPJ_G0035409.1 mouse_genomes_project X 2376435 2378274 - Ccdc120 protein_coding processed_transcript MGP_LPJ_T0095217.1 MGP_LPJ_G0035409.1 mouse_genomes_project X 2376525 2388989 - Ccdc120 protein_coding processed_transcript MGP_LPJ_T0095218.1 MGP_LPJ_G0035409.1 mouse_genomes_project X 2376578 2388981 - Ccdc120 protein_coding processed_transcript MGP_LPJ_T0011147.1 MGP_LPJ_G0009265.1 mouse_genomes_project X 31651482 31651619 - Gm44485 miRNA miRNA MGP_LPJ_T0011167.1 MGP_LPJ_G0009285.1 mouse_genomes_project X 48623926 48623997 - Mir503 miRNA miRNA MGP_LPJ_T0095338.1 MGP_LPJ_G0035434.1 mouse_genomes_project X 3124834 3645082 + MGP_LPJ_P0095338 protein_coding protein_coding MGP_LPJ_T0016541.1 MGP_LPJ_G0014632.1 mouse_genomes_project X 100595046 100596353 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096298.1 MGP_LPJ_G0035727.1 mouse_genomes_project X 70875860 70883529 + MGP_LPJ_P0096298 Atp6ap1 protein_coding protein_coding MGP_LPJ_T0096299.1 MGP_LPJ_G0035727.1 mouse_genomes_project X 70875906 70881182 + MGP_LPJ_P0096299 Atp6ap1 protein_coding protein_coding MGP_LPJ_T0096300.1 MGP_LPJ_G0035727.1 mouse_genomes_project X 70875925 70882238 + MGP_LPJ_P0096300 Atp6ap1 protein_coding protein_coding MGP_LPJ_T0096301.1 MGP_LPJ_G0035727.1 mouse_genomes_project X 70875926 70883497 + MGP_LPJ_P0096301 Atp6ap1 protein_coding protein_coding MGP_LPJ_T0096302.1 MGP_LPJ_G0035727.1 mouse_genomes_project X 70875940 70880166 + Atp6ap1 protein_coding retained_intron MGP_LPJ_T0096303.1 MGP_LPJ_G0035727.1 mouse_genomes_project X 70875996 70882271 + MGP_LPJ_P0096303 Atp6ap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0096304.1 MGP_LPJ_G0035727.1 mouse_genomes_project X 70876025 70881322 + MGP_LPJ_P0096304 Atp6ap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0096305.1 MGP_LPJ_G0035727.1 mouse_genomes_project X 70880731 70882041 + Atp6ap1 protein_coding processed_transcript MGP_LPJ_T0096306.1 MGP_LPJ_G0035727.1 mouse_genomes_project X 70881360 70882821 + Atp6ap1 protein_coding retained_intron MGP_LPJ_T0096307.1 MGP_LPJ_G0035727.1 mouse_genomes_project X 70882296 70882823 + MGP_LPJ_P0096307 Atp6ap1 protein_coding protein_coding MGP_LPJ_T0096420.1 MGP_LPJ_G0035750.1 mouse_genomes_project X 72049625 72062335 - MGP_LPJ_P0096420 Cmc4 protein_coding protein_coding MGP_LPJ_T0096421.1 MGP_LPJ_G0035750.1 mouse_genomes_project X 72049805 72062354 - MGP_LPJ_P0096421 Cmc4 protein_coding protein_coding MGP_LPJ_T0096422.1 MGP_LPJ_G0035750.1 mouse_genomes_project X 72049849 72054690 - MGP_LPJ_P0096422 Cmc4 protein_coding protein_coding MGP_LPJ_T0097290.1 MGP_LPJ_G0036032.1 mouse_genomes_project X 138379562 138484904 - MGP_LPJ_P0097290 Rbm41 protein_coding protein_coding MGP_LPJ_T0097291.1 MGP_LPJ_G0036032.1 mouse_genomes_project X 138433143 138484866 - MGP_LPJ_P0097291 Rbm41 protein_coding protein_coding MGP_LPJ_T0097292.1 MGP_LPJ_G0036032.1 mouse_genomes_project X 138433175 138484851 - MGP_LPJ_P0097292 Rbm41 protein_coding protein_coding MGP_LPJ_T0097293.1 MGP_LPJ_G0036032.1 mouse_genomes_project X 138434006 138484860 - MGP_LPJ_P0097293 Rbm41 protein_coding protein_coding MGP_LPJ_T0097294.1 MGP_LPJ_G0036032.1 mouse_genomes_project X 138454322 138480393 - Rbm41 protein_coding retained_intron MGP_LPJ_T0097295.1 MGP_LPJ_G0036032.1 mouse_genomes_project X 138454988 138484845 - Rbm41 protein_coding processed_transcript MGP_LPJ_T0097296.1 MGP_LPJ_G0036032.1 mouse_genomes_project X 138478667 138484875 - Rbm41 protein_coding retained_intron MGP_LPJ_T0016868.1 MGP_LPJ_G0014959.1 mouse_genomes_project X 165741647 165742473 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099910.1 MGP_LPJ_G0038173.1 mouse_genomes_project X 98452828 98452891 + Gm24577 snRNA snRNA MGP_LPJ_T0016580.1 MGP_LPJ_G0014671.1 mouse_genomes_project X 104523472 104523878 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016694.1 MGP_LPJ_G0014785.1 mouse_genomes_project X 132922429 132923292 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096239.1 MGP_LPJ_G0035722.1 mouse_genomes_project X 70797495 70824782 - MGP_LPJ_P0096239 Flna protein_coding protein_coding MGP_LPJ_T0096240.1 MGP_LPJ_G0035722.1 mouse_genomes_project X 70797495 70820211 - MGP_LPJ_P0096240 Flna protein_coding nonsense_mediated_decay MGP_LPJ_T0096241.1 MGP_LPJ_G0035722.1 mouse_genomes_project X 70797497 70820347 - MGP_LPJ_P0096241 Flna protein_coding protein_coding MGP_LPJ_T0096242.1 MGP_LPJ_G0035722.1 mouse_genomes_project X 70797575 70820368 - MGP_LPJ_P0096242 Flna protein_coding protein_coding MGP_LPJ_T0096243.1 MGP_LPJ_G0035722.1 mouse_genomes_project X 70797823 70820177 - MGP_LPJ_P0096243 Flna protein_coding protein_coding MGP_LPJ_T0096244.1 MGP_LPJ_G0035722.1 mouse_genomes_project X 70798844 70800514 - Flna protein_coding processed_transcript MGP_LPJ_T0096245.1 MGP_LPJ_G0035722.1 mouse_genomes_project X 70798868 70800824 - Flna protein_coding retained_intron MGP_LPJ_T0096246.1 MGP_LPJ_G0035722.1 mouse_genomes_project X 70800482 70801655 - Flna protein_coding retained_intron MGP_LPJ_T0096247.1 MGP_LPJ_G0035722.1 mouse_genomes_project X 70800906 70802524 - MGP_LPJ_P0096247 Flna protein_coding protein_coding MGP_LPJ_T0096248.1 MGP_LPJ_G0035722.1 mouse_genomes_project X 70801271 70802003 - Flna protein_coding retained_intron MGP_LPJ_T0096249.1 MGP_LPJ_G0035722.1 mouse_genomes_project X 70801886 70803098 - MGP_LPJ_P0096249 Flna protein_coding nonsense_mediated_decay MGP_LPJ_T0096250.1 MGP_LPJ_G0035722.1 mouse_genomes_project X 70802120 70802834 - Flna protein_coding retained_intron MGP_LPJ_T0096251.1 MGP_LPJ_G0035722.1 mouse_genomes_project X 70802414 70804605 - MGP_LPJ_P0096251 Flna protein_coding protein_coding MGP_LPJ_T0096252.1 MGP_LPJ_G0035722.1 mouse_genomes_project X 70804730 70809997 - Flna protein_coding processed_transcript MGP_LPJ_T0096253.1 MGP_LPJ_G0035722.1 mouse_genomes_project X 70810115 70811749 - Flna protein_coding processed_transcript MGP_LPJ_T0016437.1 MGP_LPJ_G0014528.1 mouse_genomes_project X 82668068 82673705 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016604.1 MGP_LPJ_G0014695.1 mouse_genomes_project X 110284198 110285106 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016267.1 MGP_LPJ_G0014358.1 mouse_genomes_project X 41875977 41876506 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016617.1 MGP_LPJ_G0014708.1 mouse_genomes_project X 112115362 112116723 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016498.1 MGP_LPJ_G0014589.1 mouse_genomes_project X 92044450 92045080 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096736.1 MGP_LPJ_G0035852.1 mouse_genomes_project X 98726437 98730303 - MGP_LPJ_P0096736 Il2rg protein_coding protein_coding MGP_LPJ_T0096737.1 MGP_LPJ_G0035852.1 mouse_genomes_project X 98726997 98729482 - MGP_LPJ_P0096737 Il2rg protein_coding protein_coding MGP_LPJ_T0096738.1 MGP_LPJ_G0035852.1 mouse_genomes_project X 98728713 98730238 - Il2rg protein_coding retained_intron MGP_LPJ_T0096739.1 MGP_LPJ_G0035852.1 mouse_genomes_project X 98729243 98730206 - Il2rg protein_coding processed_transcript MGP_LPJ_T0009405.1 MGP_LPJ_G0007551.1 mouse_genomes_project X 77833256 77836073 - Gm26775 lincRNA lincRNA MGP_LPJ_T0016715.1 MGP_LPJ_G0014806.1 mouse_genomes_project X 135542277 135542875 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098364.1 MGP_LPJ_G0036645.1 mouse_genomes_project X 167188383 167188493 + Gm24772 rRNA rRNA MGP_LPJ_T0097492.1 MGP_LPJ_G0036079.1 mouse_genomes_project X 150351368 150407570 + MGP_LPJ_P0097492 Phf8 protein_coding protein_coding MGP_LPJ_T0097493.1 MGP_LPJ_G0036079.1 mouse_genomes_project X 150351368 150460129 + MGP_LPJ_P0097493 Phf8 protein_coding protein_coding MGP_LPJ_T0097494.1 MGP_LPJ_G0036079.1 mouse_genomes_project X 150351368 150468153 + MGP_LPJ_P0097494 Phf8 protein_coding protein_coding MGP_LPJ_T0097495.1 MGP_LPJ_G0036079.1 mouse_genomes_project X 150351865 150433891 + MGP_LPJ_P0097495 Phf8 protein_coding protein_coding MGP_LPJ_T0097496.1 MGP_LPJ_G0036079.1 mouse_genomes_project X 150351877 150460129 + MGP_LPJ_P0097496 Phf8 protein_coding protein_coding MGP_LPJ_T0097497.1 MGP_LPJ_G0036079.1 mouse_genomes_project X 150351883 150419015 + MGP_LPJ_P0097497 Phf8 protein_coding protein_coding MGP_LPJ_T0097498.1 MGP_LPJ_G0036079.1 mouse_genomes_project X 150351883 150468155 + MGP_LPJ_P0097498 Phf8 protein_coding protein_coding MGP_LPJ_T0097499.1 MGP_LPJ_G0036079.1 mouse_genomes_project X 150353056 150385910 + MGP_LPJ_P0097499 Phf8 protein_coding protein_coding MGP_LPJ_T0097500.1 MGP_LPJ_G0036079.1 mouse_genomes_project X 150389178 150391402 + Phf8 protein_coding retained_intron MGP_LPJ_T0097501.1 MGP_LPJ_G0036079.1 mouse_genomes_project X 150402786 150412599 + MGP_LPJ_P0097501 Phf8 protein_coding protein_coding MGP_LPJ_T0097502.1 MGP_LPJ_G0036079.1 mouse_genomes_project X 150464112 150468155 + Phf8 protein_coding retained_intron MGP_LPJ_T0016298.1 MGP_LPJ_G0014389.1 mouse_genomes_project X 52026432 52026999 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016271.1 MGP_LPJ_G0014362.1 mouse_genomes_project X 43045211 43046765 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095443.1 MGP_LPJ_G0035474.1 mouse_genomes_project X 13328334 13329179 + MGP_LPJ_P0095443 Dusp21 protein_coding protein_coding MGP_LPJ_T0016539.1 MGP_LPJ_G0014630.1 mouse_genomes_project X 100587992 100588198 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095691.1 MGP_LPJ_G0035563.1 mouse_genomes_project X 37439474 37452602 + Xiap protein_coding processed_transcript MGP_LPJ_T0095692.1 MGP_LPJ_G0035563.1 mouse_genomes_project X 37447631 37489909 + MGP_LPJ_P0095692 Xiap protein_coding protein_coding MGP_LPJ_T0095693.1 MGP_LPJ_G0035563.1 mouse_genomes_project X 37447676 37474811 + MGP_LPJ_P0095693 Xiap protein_coding protein_coding MGP_LPJ_T0095694.1 MGP_LPJ_G0035563.1 mouse_genomes_project X 37447713 37485072 + Xiap protein_coding processed_transcript MGP_LPJ_T0095695.1 MGP_LPJ_G0035563.1 mouse_genomes_project X 37448362 37489909 + MGP_LPJ_P0095695 Xiap protein_coding protein_coding MGP_LPJ_T0095696.1 MGP_LPJ_G0035563.1 mouse_genomes_project X 37448374 37452602 + Xiap protein_coding processed_transcript MGP_LPJ_T0095697.1 MGP_LPJ_G0035563.1 mouse_genomes_project X 37448719 37489909 + Xiap protein_coding processed_transcript MGP_LPJ_T0095698.1 MGP_LPJ_G0035563.1 mouse_genomes_project X 37451289 37489909 + MGP_LPJ_P0095698 Xiap protein_coding protein_coding MGP_LPJ_T0095699.1 MGP_LPJ_G0035563.1 mouse_genomes_project X 37473982 37489909 + MGP_LPJ_P0095699 Xiap protein_coding protein_coding MGP_LPJ_T0097184.1 MGP_LPJ_G0035996.1 mouse_genomes_project X 134351358 134353031 - MGP_LPJ_P0097184 Bex2 protein_coding protein_coding MGP_LPJ_T0097155.1 MGP_LPJ_G0035983.1 mouse_genomes_project X 133578163 133734082 + MGP_LPJ_P0097155 protein_coding protein_coding MGP_LPJ_T0095942.1 MGP_LPJ_G0035645.1 mouse_genomes_project X 56173570 56551235 - MGP_LPJ_P0095942 Atp11c protein_coding protein_coding MGP_LPJ_T0095943.1 MGP_LPJ_G0035645.1 mouse_genomes_project X 56173573 56358447 - MGP_LPJ_P0095943 Atp11c protein_coding protein_coding MGP_LPJ_T0095944.1 MGP_LPJ_G0035645.1 mouse_genomes_project X 56173573 56358447 - MGP_LPJ_P0095944 Atp11c protein_coding protein_coding MGP_LPJ_T0095945.1 MGP_LPJ_G0035645.1 mouse_genomes_project X 56173753 56358297 - MGP_LPJ_P0095945 Atp11c protein_coding unknown_likely_coding MGP_LPJ_T0095946.1 MGP_LPJ_G0035645.1 mouse_genomes_project X 56175903 56222295 - Atp11c protein_coding processed_transcript MGP_LPJ_T0095947.1 MGP_LPJ_G0035645.1 mouse_genomes_project X 56191971 56551235 - Atp11c protein_coding processed_transcript MGP_LPJ_T0097042.1 MGP_LPJ_G0035952.1 mouse_genomes_project X 125591394 125599578 - MGP_LPJ_P0097042 Cldn34c4 protein_coding protein_coding MGP_LPJ_T0097222.1 MGP_LPJ_G0036013.1 mouse_genomes_project X 135313381 135314433 + MGP_LPJ_P0097222 H2bfm protein_coding protein_coding MGP_LPJ_T0097557.1 MGP_LPJ_G0036087.1 mouse_genomes_project X 151213543 151238531 - MGP_LPJ_P0097557 Gpr173 protein_coding protein_coding MGP_LPJ_T0097558.1 MGP_LPJ_G0036087.1 mouse_genomes_project X 151236842 151238531 - Gpr173 protein_coding processed_transcript MGP_LPJ_T0095859.1 MGP_LPJ_G0035616.1 mouse_genomes_project X 49283619 49284621 - MGP_LPJ_P0095859 protein_coding protein_coding MGP_LPJ_T0016600.1 MGP_LPJ_G0014691.1 mouse_genomes_project X 109638008 109638741 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016460.1 MGP_LPJ_G0014551.1 mouse_genomes_project X 86423173 86423894 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016598.1 MGP_LPJ_G0014689.1 mouse_genomes_project X 109437008 109437653 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011240.1 MGP_LPJ_G0009358.1 mouse_genomes_project X 150697906 150697982 + Mir3113 miRNA miRNA MGP_LPJ_T0016842.1 MGP_LPJ_G0014933.1 mouse_genomes_project X 159449502 159451662 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016222.1 MGP_LPJ_G0014313.1 mouse_genomes_project X 31475173 31475779 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096965.1 MGP_LPJ_G0035920.1 mouse_genomes_project X 106954722 107022033 + MGP_LPJ_P0096965 Sh3bgrl protein_coding protein_coding MGP_LPJ_T0096966.1 MGP_LPJ_G0035920.1 mouse_genomes_project X 106954866 107056803 + Sh3bgrl protein_coding processed_transcript MGP_LPJ_T0096967.1 MGP_LPJ_G0035920.1 mouse_genomes_project X 106973685 107013900 + Sh3bgrl protein_coding processed_transcript MGP_LPJ_T0016622.1 MGP_LPJ_G0014713.1 mouse_genomes_project X 112932656 112935726 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011773.1 MGP_LPJ_G0009891.1 mouse_genomes_project X 65085992 65086120 + Gm27838 misc_RNA misc_RNA MGP_LPJ_T0101442.1 MGP_LPJ_G0039605.1 mouse_genomes_project X 101195477 101196371 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0095763.1 MGP_LPJ_G0035581.1 mouse_genomes_project X 43916919 43969660 - MGP_LPJ_P0095763 Elf4 protein_coding protein_coding MGP_LPJ_T0095764.1 MGP_LPJ_G0035581.1 mouse_genomes_project X 43916922 43979534 - MGP_LPJ_P0095764 Elf4 protein_coding protein_coding MGP_LPJ_T0095765.1 MGP_LPJ_G0035581.1 mouse_genomes_project X 43922525 43979534 - MGP_LPJ_P0095765 Elf4 protein_coding protein_coding MGP_LPJ_T0016795.1 MGP_LPJ_G0014886.1 mouse_genomes_project X 151431932 151432458 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096924.1 MGP_LPJ_G0035906.1 mouse_genomes_project X 104345716 104490471 + MGP_LPJ_P0096924 Gm5127 protein_coding protein_coding MGP_LPJ_T0096925.1 MGP_LPJ_G0035906.1 mouse_genomes_project X 104345716 104489776 + MGP_LPJ_P0096925 Gm5127 protein_coding protein_coding MGP_LPJ_T0016293.1 MGP_LPJ_G0014384.1 mouse_genomes_project X 49432029 49432323 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016417.1 MGP_LPJ_G0014508.1 mouse_genomes_project X 76611633 76612476 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016153.1 MGP_LPJ_G0014244.1 mouse_genomes_project X 3765769 3766857 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096834.1 MGP_LPJ_G0035873.1 mouse_genomes_project X 100256623 100335791 + MGP_LPJ_P0096834 Dmrtc1b protein_coding protein_coding MGP_LPJ_T0016157.1 MGP_LPJ_G0014248.1 mouse_genomes_project X 4258246 4258564 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101186.1 MGP_LPJ_G0039449.1 mouse_genomes_project X 130531149 130531273 + Gm26406 snoRNA snoRNA MGP_LPJ_T0096959.1 MGP_LPJ_G0035918.1 mouse_genomes_project X 106583714 106688080 - MGP_LPJ_P0096959 Brwd3 protein_coding protein_coding MGP_LPJ_T0096960.1 MGP_LPJ_G0035918.1 mouse_genomes_project X 106589266 106688080 - MGP_LPJ_P0096960 Brwd3 protein_coding nonsense_mediated_decay MGP_LPJ_T0096961.1 MGP_LPJ_G0035918.1 mouse_genomes_project X 106589266 106688080 - MGP_LPJ_P0096961 Brwd3 protein_coding nonsense_mediated_decay MGP_LPJ_T0096962.1 MGP_LPJ_G0035918.1 mouse_genomes_project X 106655908 106688080 - Brwd3 protein_coding retained_intron MGP_LPJ_T0096963.1 MGP_LPJ_G0035918.1 mouse_genomes_project X 106674830 106688080 - MGP_LPJ_P0096963 Brwd3 protein_coding protein_coding MGP_LPJ_T0097191.1 MGP_LPJ_G0035999.1 mouse_genomes_project X 134493734 134497844 - MGP_LPJ_P0097191 Tceal5 protein_coding protein_coding MGP_LPJ_T0018555.1 MGP_LPJ_G0015687.1 mouse_genomes_project X 2170034 2219617 - Gm36995 processed_transcript retained_intron MGP_LPJ_T0009387.1 MGP_LPJ_G0007537.1 mouse_genomes_project X 16496378 16526406 - Gm6938 lincRNA lincRNA MGP_LPJ_T0101152.1 MGP_LPJ_G0039415.1 mouse_genomes_project X 32868769 32868912 + Gm26494 snoRNA snoRNA MGP_LPJ_T0102487.1 MGP_LPJ_G0040523.1 mouse_genomes_project X 33745533 33747217 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0016452.1 MGP_LPJ_G0014543.1 mouse_genomes_project X 85729066 85729258 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095901.1 MGP_LPJ_G0035633.1 mouse_genomes_project X 52955243 52958867 + MGP_LPJ_P0095901 Htatsf1 protein_coding protein_coding MGP_LPJ_T0095902.1 MGP_LPJ_G0035633.1 mouse_genomes_project X 52955275 52968844 + MGP_LPJ_P0095902 Htatsf1 protein_coding protein_coding MGP_LPJ_T0095903.1 MGP_LPJ_G0035633.1 mouse_genomes_project X 52955558 52958865 + Htatsf1 protein_coding retained_intron MGP_LPJ_T0016605.1 MGP_LPJ_G0014696.1 mouse_genomes_project X 110397551 110397714 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009433.1 MGP_LPJ_G0007566.1 mouse_genomes_project X 112554268 112555879 + 4930555B12Rik lincRNA lincRNA MGP_LPJ_T0096662.1 MGP_LPJ_G0035832.1 mouse_genomes_project X 96906028 96911573 - MGP_LPJ_P0096662 Pja1 protein_coding protein_coding MGP_LPJ_T0096663.1 MGP_LPJ_G0035832.1 mouse_genomes_project X 96906032 96910982 - MGP_LPJ_P0096663 Pja1 protein_coding protein_coding MGP_LPJ_T0096664.1 MGP_LPJ_G0035832.1 mouse_genomes_project X 96906062 96911030 - MGP_LPJ_P0096664 Pja1 protein_coding protein_coding MGP_LPJ_T0096665.1 MGP_LPJ_G0035832.1 mouse_genomes_project X 96906408 96910987 - MGP_LPJ_P0096665 Pja1 protein_coding protein_coding MGP_LPJ_T0096666.1 MGP_LPJ_G0035832.1 mouse_genomes_project X 96906440 96910967 - MGP_LPJ_P0096666 Pja1 protein_coding protein_coding MGP_LPJ_T0005591.1 MGP_LPJ_G0004716.1 mouse_genomes_project X 2187547 2194965 + Ppp1r3fos antisense antisense MGP_LPJ_T0005592.1 MGP_LPJ_G0004716.1 mouse_genomes_project X 2188439 2192363 + Ppp1r3fos antisense antisense MGP_LPJ_T0096928.1 MGP_LPJ_G0035909.1 mouse_genomes_project X 104868818 104885148 + MGP_LPJ_P0096928 P2ry10 protein_coding protein_coding MGP_LPJ_T0096929.1 MGP_LPJ_G0035909.1 mouse_genomes_project X 104869560 104885152 + MGP_LPJ_P0096929 P2ry10 protein_coding protein_coding MGP_LPJ_T0096930.1 MGP_LPJ_G0035909.1 mouse_genomes_project X 104869604 104885152 + MGP_LPJ_P0096930 P2ry10 protein_coding protein_coding MGP_LPJ_T0016202.1 MGP_LPJ_G0014293.1 mouse_genomes_project X 15505819 15506612 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016253.1 MGP_LPJ_G0014344.1 mouse_genomes_project X 38801971 38802629 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016660.1 MGP_LPJ_G0014751.1 mouse_genomes_project X 120310063 120310366 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096910.1 MGP_LPJ_G0035901.1 mouse_genomes_project X 103898152 103898571 + Tlr13 protein_coding retained_intron MGP_LPJ_T0096911.1 MGP_LPJ_G0035901.1 mouse_genomes_project X 103898177 103917261 + MGP_LPJ_P0096911 Tlr13 protein_coding protein_coding MGP_LPJ_T0095469.1 MGP_LPJ_G0035484.1 mouse_genomes_project X 15752704 15787621 + MGP_LPJ_P0095469 Rbm10 protein_coding protein_coding MGP_LPJ_T0095470.1 MGP_LPJ_G0035484.1 mouse_genomes_project X 15752823 15787634 + MGP_LPJ_P0095470 Rbm10 protein_coding protein_coding MGP_LPJ_T0095471.1 MGP_LPJ_G0035484.1 mouse_genomes_project X 15752984 15787634 + MGP_LPJ_P0095471 Rbm10 protein_coding protein_coding MGP_LPJ_T0095472.1 MGP_LPJ_G0035484.1 mouse_genomes_project X 15752986 15785929 + Rbm10 protein_coding processed_transcript MGP_LPJ_T0018641.1 MGP_LPJ_G0015717.1 mouse_genomes_project X 168609401 168652556 + Gm15246 processed_transcript processed_transcript MGP_LPJ_T0018642.1 MGP_LPJ_G0015717.1 mouse_genomes_project X 168609401 168661803 + Gm15246 processed_transcript processed_transcript MGP_LPJ_T0016503.1 MGP_LPJ_G0014594.1 mouse_genomes_project X 92707152 92709262 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096276.1 MGP_LPJ_G0035726.1 mouse_genomes_project X 70860618 70861622 + Taz protein_coding processed_transcript MGP_LPJ_T0096277.1 MGP_LPJ_G0035726.1 mouse_genomes_project X 70860618 70861572 + Taz protein_coding processed_transcript MGP_LPJ_T0096278.1 MGP_LPJ_G0035726.1 mouse_genomes_project X 70861403 70868858 + MGP_LPJ_P0096278 Taz protein_coding protein_coding MGP_LPJ_T0096279.1 MGP_LPJ_G0035726.1 mouse_genomes_project X 70861456 70864594 + Taz protein_coding retained_intron MGP_LPJ_T0096280.1 MGP_LPJ_G0035726.1 mouse_genomes_project X 70861456 70866742 + Taz protein_coding retained_intron MGP_LPJ_T0096281.1 MGP_LPJ_G0035726.1 mouse_genomes_project X 70861456 70868855 + Taz protein_coding retained_intron MGP_LPJ_T0096282.1 MGP_LPJ_G0035726.1 mouse_genomes_project X 70861456 70868855 + MGP_LPJ_P0096282 Taz protein_coding protein_coding MGP_LPJ_T0096283.1 MGP_LPJ_G0035726.1 mouse_genomes_project X 70861466 70866986 + Taz protein_coding retained_intron MGP_LPJ_T0096284.1 MGP_LPJ_G0035726.1 mouse_genomes_project X 70861466 70867411 + Taz protein_coding retained_intron MGP_LPJ_T0096285.1 MGP_LPJ_G0035726.1 mouse_genomes_project X 70861468 70868855 + MGP_LPJ_P0096285 Taz protein_coding protein_coding MGP_LPJ_T0096286.1 MGP_LPJ_G0035726.1 mouse_genomes_project X 70861472 70862676 + Taz protein_coding retained_intron MGP_LPJ_T0096287.1 MGP_LPJ_G0035726.1 mouse_genomes_project X 70861478 70867865 + MGP_LPJ_P0096287 Taz protein_coding protein_coding MGP_LPJ_T0096288.1 MGP_LPJ_G0035726.1 mouse_genomes_project X 70861495 70863021 + Taz protein_coding retained_intron MGP_LPJ_T0096289.1 MGP_LPJ_G0035726.1 mouse_genomes_project X 70861627 70867551 + Taz protein_coding retained_intron MGP_LPJ_T0096290.1 MGP_LPJ_G0035726.1 mouse_genomes_project X 70861714 70868107 + MGP_LPJ_P0096290 Taz protein_coding protein_coding MGP_LPJ_T0096291.1 MGP_LPJ_G0035726.1 mouse_genomes_project X 70861788 70868192 + MGP_LPJ_P0096291 Taz protein_coding protein_coding MGP_LPJ_T0096292.1 MGP_LPJ_G0035726.1 mouse_genomes_project X 70862643 70868055 + MGP_LPJ_P0096292 Taz protein_coding protein_coding MGP_LPJ_T0096293.1 MGP_LPJ_G0035726.1 mouse_genomes_project X 70866371 70867316 + Taz protein_coding retained_intron MGP_LPJ_T0096294.1 MGP_LPJ_G0035726.1 mouse_genomes_project X 70866726 70868441 + MGP_LPJ_P0096294 Taz protein_coding nonsense_mediated_decay MGP_LPJ_T0096295.1 MGP_LPJ_G0035726.1 mouse_genomes_project X 70866778 70868595 + MGP_LPJ_P0096295 Taz protein_coding protein_coding MGP_LPJ_T0096296.1 MGP_LPJ_G0035726.1 mouse_genomes_project X 70867368 70868438 + MGP_LPJ_P0096296 Taz protein_coding nonsense_mediated_decay MGP_LPJ_T0096297.1 MGP_LPJ_G0035726.1 mouse_genomes_project X 70867379 70868388 + Taz protein_coding retained_intron MGP_LPJ_T0097771.1 MGP_LPJ_G0036149.1 mouse_genomes_project X 163490185 163587754 + MGP_LPJ_P0097771 Pir protein_coding protein_coding MGP_LPJ_T0097772.1 MGP_LPJ_G0036149.1 mouse_genomes_project X 163490245 163591638 + MGP_LPJ_P0097772 Pir protein_coding protein_coding MGP_LPJ_T0097773.1 MGP_LPJ_G0036149.1 mouse_genomes_project X 163490325 163492689 + Pir protein_coding retained_intron MGP_LPJ_T0097774.1 MGP_LPJ_G0036149.1 mouse_genomes_project X 163490361 163569888 + Pir protein_coding retained_intron MGP_LPJ_T0097775.1 MGP_LPJ_G0036149.1 mouse_genomes_project X 163490387 163539942 + Pir protein_coding processed_transcript MGP_LPJ_T0016438.1 MGP_LPJ_G0014529.1 mouse_genomes_project X 82668070 82673699 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102513.1 MGP_LPJ_G0040549.1 mouse_genomes_project X 100395920 100398793 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0097016.1 MGP_LPJ_G0035937.1 mouse_genomes_project X 112099065 112183603 + MGP_LPJ_P0097016 Klhl4 protein_coding protein_coding MGP_LPJ_T0097017.1 MGP_LPJ_G0035937.1 mouse_genomes_project X 112099065 112183603 + MGP_LPJ_P0097017 Klhl4 protein_coding protein_coding MGP_LPJ_T0097018.1 MGP_LPJ_G0035937.1 mouse_genomes_project X 112099336 112183282 + MGP_LPJ_P0097018 Klhl4 protein_coding protein_coding MGP_LPJ_T0016442.1 MGP_LPJ_G0014533.1 mouse_genomes_project X 83228071 83233926 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009411.1 MGP_LPJ_G0007556.1 mouse_genomes_project X 93090975 93091655 - 1700010D01Rik lincRNA lincRNA MGP_LPJ_T0096790.1 MGP_LPJ_G0035860.1 mouse_genomes_project X 99116265 99162304 + MGP_LPJ_P0096790 Ogt protein_coding protein_coding MGP_LPJ_T0096791.1 MGP_LPJ_G0035860.1 mouse_genomes_project X 99116267 99129032 + Ogt protein_coding retained_intron MGP_LPJ_T0096792.1 MGP_LPJ_G0035860.1 mouse_genomes_project X 99116269 99163715 + MGP_LPJ_P0096792 Ogt protein_coding protein_coding MGP_LPJ_T0096793.1 MGP_LPJ_G0035860.1 mouse_genomes_project X 99116299 99130473 + Ogt protein_coding processed_transcript MGP_LPJ_T0096794.1 MGP_LPJ_G0035860.1 mouse_genomes_project X 99116313 99130741 + Ogt protein_coding retained_intron MGP_LPJ_T0096795.1 MGP_LPJ_G0035860.1 mouse_genomes_project X 99116345 99129049 + Ogt protein_coding retained_intron MGP_LPJ_T0096796.1 MGP_LPJ_G0035860.1 mouse_genomes_project X 99131499 99162522 + Ogt protein_coding processed_transcript MGP_LPJ_T0096413.1 MGP_LPJ_G0035748.1 mouse_genomes_project X 71817701 72025717 - MGP_LPJ_P0096413 F8 protein_coding protein_coding MGP_LPJ_T0096414.1 MGP_LPJ_G0035748.1 mouse_genomes_project X 71817705 72023441 - MGP_LPJ_P0096414 F8 protein_coding protein_coding MGP_LPJ_T0096415.1 MGP_LPJ_G0035748.1 mouse_genomes_project X 71981654 72026012 - MGP_LPJ_P0096415 F8 protein_coding protein_coding MGP_LPJ_T0096416.1 MGP_LPJ_G0035748.1 mouse_genomes_project X 71997305 72025692 - MGP_LPJ_P0096416 F8 protein_coding protein_coding MGP_LPJ_T0016732.1 MGP_LPJ_G0014823.1 mouse_genomes_project X 139326445 139327031 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095444.1 MGP_LPJ_G0035475.1 mouse_genomes_project X 13347913 13472984 + MGP_LPJ_P0095444 Kdm6a protein_coding protein_coding MGP_LPJ_T0095445.1 MGP_LPJ_G0035475.1 mouse_genomes_project X 13347913 13472984 + MGP_LPJ_P0095445 Kdm6a protein_coding protein_coding MGP_LPJ_T0095446.1 MGP_LPJ_G0035475.1 mouse_genomes_project X 13347986 13449929 + Kdm6a protein_coding retained_intron MGP_LPJ_T0095447.1 MGP_LPJ_G0035475.1 mouse_genomes_project X 13348344 13465355 + MGP_LPJ_P0095447 Kdm6a protein_coding unknown_likely_coding MGP_LPJ_T0095448.1 MGP_LPJ_G0035475.1 mouse_genomes_project X 13467735 13471526 + Kdm6a protein_coding retained_intron MGP_LPJ_T0016772.1 MGP_LPJ_G0014863.1 mouse_genomes_project X 144549330 144549697 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097324.1 MGP_LPJ_G0036042.1 mouse_genomes_project X 139472855 139508472 + Atg4a protein_coding processed_transcript MGP_LPJ_T0097325.1 MGP_LPJ_G0036042.1 mouse_genomes_project X 139472867 139568022 + MGP_LPJ_P0097325 Atg4a protein_coding protein_coding MGP_LPJ_T0097327.1 MGP_LPJ_G0036042.1 mouse_genomes_project X 139566385 139567746 + Atg4a protein_coding retained_intron MGP_LPJ_T0096484.1 MGP_LPJ_G0035778.1 mouse_genomes_project X 77833260 77858242 + Tmem47 protein_coding processed_transcript MGP_LPJ_T0096485.1 MGP_LPJ_G0035778.1 mouse_genomes_project X 77833267 77859197 + MGP_LPJ_P0096485 Tmem47 protein_coding protein_coding MGP_LPJ_T0096486.1 MGP_LPJ_G0035778.1 mouse_genomes_project X 77833278 77861338 + MGP_LPJ_P0096486 Tmem47 protein_coding protein_coding MGP_LPJ_T0016508.1 MGP_LPJ_G0014599.1 mouse_genomes_project X 94273650 94276015 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097008.1 MGP_LPJ_G0035936.1 mouse_genomes_project X 110936245 111484198 + MGP_LPJ_P0097008 Dach2 protein_coding protein_coding MGP_LPJ_T0097009.1 MGP_LPJ_G0035936.1 mouse_genomes_project X 110936257 111479719 + MGP_LPJ_P0097009 Dach2 protein_coding protein_coding MGP_LPJ_T0097010.1 MGP_LPJ_G0035936.1 mouse_genomes_project X 110936311 111483390 + MGP_LPJ_P0097010 Dach2 protein_coding protein_coding MGP_LPJ_T0097011.1 MGP_LPJ_G0035936.1 mouse_genomes_project X 110936987 111399361 + Dach2 protein_coding retained_intron MGP_LPJ_T0097012.1 MGP_LPJ_G0035936.1 mouse_genomes_project X 110936992 111482068 + MGP_LPJ_P0097012 Dach2 protein_coding protein_coding MGP_LPJ_T0097013.1 MGP_LPJ_G0035936.1 mouse_genomes_project X 110936992 111483705 + MGP_LPJ_P0097013 Dach2 protein_coding protein_coding MGP_LPJ_T0097014.1 MGP_LPJ_G0035936.1 mouse_genomes_project X 110937369 111197513 + Dach2 protein_coding processed_transcript MGP_LPJ_T0097015.1 MGP_LPJ_G0035936.1 mouse_genomes_project X 111363096 111482068 + Dach2 protein_coding processed_transcript MGP_LPJ_T0101441.1 MGP_LPJ_G0035805.1 mouse_genomes_project X 91251999 91272312 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0099936.1 MGP_LPJ_G0038199.1 mouse_genomes_project X 144181140 144181238 - Gm27659 snRNA snRNA MGP_LPJ_T0096048.1 MGP_LPJ_G0035684.1 mouse_genomes_project X 68962658 69206075 - MGP_LPJ_P0096048 Gabra3 protein_coding protein_coding MGP_LPJ_T0096049.1 MGP_LPJ_G0035684.1 mouse_genomes_project X 68964552 69206626 - MGP_LPJ_P0096049 Gabra3 protein_coding protein_coding MGP_LPJ_T0096050.1 MGP_LPJ_G0035684.1 mouse_genomes_project X 69032483 69206075 - Gabra3 protein_coding processed_transcript MGP_LPJ_T0096151.1 MGP_LPJ_G0035713.1 mouse_genomes_project X 70454686 70457013 + MGP_LPJ_P0096151 Avpr2 protein_coding protein_coding MGP_LPJ_T0096152.1 MGP_LPJ_G0035713.1 mouse_genomes_project X 70454687 70456006 + Avpr2 protein_coding processed_transcript MGP_LPJ_T0096153.1 MGP_LPJ_G0035713.1 mouse_genomes_project X 70454694 70458087 + MGP_LPJ_P0096153 Avpr2 protein_coding protein_coding MGP_LPJ_T0096154.1 MGP_LPJ_G0035713.1 mouse_genomes_project X 70454698 70456782 + MGP_LPJ_P0096154 Avpr2 protein_coding protein_coding MGP_LPJ_T0095863.1 MGP_LPJ_G0035620.1 mouse_genomes_project X 49433241 49435588 - MGP_LPJ_P0095863 Zfp36l3 protein_coding protein_coding MGP_LPJ_T0101626.1 MGP_LPJ_G0039694.1 mouse_genomes_project X 149612741 149645372 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0101627.1 MGP_LPJ_G0039694.1 mouse_genomes_project X 149638397 149640621 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101628.1 MGP_LPJ_G0039694.1 mouse_genomes_project X 149642010 149645485 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0097221.1 MGP_LPJ_G0036012.1 mouse_genomes_project X 135243855 135254464 - MGP_LPJ_P0097221 Rab9b protein_coding protein_coding MGP_LPJ_T0095927.1 MGP_LPJ_G0035641.1 mouse_genomes_project X 54850990 54863095 + MGP_LPJ_P0095927 4930550L24Rik protein_coding protein_coding MGP_LPJ_T0095928.1 MGP_LPJ_G0035641.1 mouse_genomes_project X 54853093 54863095 + MGP_LPJ_P0095928 4930550L24Rik protein_coding protein_coding MGP_LPJ_T0009412.1 MGP_LPJ_G0007557.1 mouse_genomes_project X 96842366 96882907 - Gm14812 lincRNA lincRNA MGP_LPJ_T0096027.1 MGP_LPJ_G0035674.1 mouse_genomes_project X 68055115 68059504 + MGP_LPJ_P0096027 Hmgb3 protein_coding protein_coding MGP_LPJ_T0096028.1 MGP_LPJ_G0035674.1 mouse_genomes_project X 68057482 68058972 + Hmgb3 protein_coding retained_intron MGP_LPJ_T0096775.1 MGP_LPJ_G0035857.1 mouse_genomes_project X 98896296 98906628 + MGP_LPJ_P0096775 Nono protein_coding protein_coding MGP_LPJ_T0096776.1 MGP_LPJ_G0035857.1 mouse_genomes_project X 98896533 98917915 + MGP_LPJ_P0096776 Nono protein_coding protein_coding MGP_LPJ_T0096777.1 MGP_LPJ_G0035857.1 mouse_genomes_project X 98896713 98910225 + Nono protein_coding retained_intron MGP_LPJ_T0096778.1 MGP_LPJ_G0035857.1 mouse_genomes_project X 98910384 98912125 + Nono protein_coding retained_intron MGP_LPJ_T0096779.1 MGP_LPJ_G0035857.1 mouse_genomes_project X 98911099 98915696 + Nono protein_coding retained_intron MGP_LPJ_T0096780.1 MGP_LPJ_G0035857.1 mouse_genomes_project X 98912526 98915497 + Nono protein_coding processed_transcript MGP_LPJ_T0096781.1 MGP_LPJ_G0035857.1 mouse_genomes_project X 98913616 98915612 + Nono protein_coding retained_intron MGP_LPJ_T0016849.1 MGP_LPJ_G0014940.1 mouse_genomes_project X 161889800 161890442 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009401.1 MGP_LPJ_G0007547.1 mouse_genomes_project X 63846204 63847404 + 1700036O09Rik lincRNA lincRNA MGP_LPJ_T0016566.1 MGP_LPJ_G0014657.1 mouse_genomes_project X 102653338 102654292 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095195.1 MGP_LPJ_G0035407.1 mouse_genomes_project X 2359223 2363542 + MGP_LPJ_P0095195 Wdr45 protein_coding protein_coding MGP_LPJ_T0095196.1 MGP_LPJ_G0035407.1 mouse_genomes_project X 2359470 2365450 + MGP_LPJ_P0095196 Wdr45 protein_coding protein_coding MGP_LPJ_T0095197.1 MGP_LPJ_G0035407.1 mouse_genomes_project X 2359490 2365240 + MGP_LPJ_P0095197 Wdr45 protein_coding protein_coding MGP_LPJ_T0095198.1 MGP_LPJ_G0035407.1 mouse_genomes_project X 2359499 2365451 + MGP_LPJ_P0095198 Wdr45 protein_coding protein_coding MGP_LPJ_T0095199.1 MGP_LPJ_G0035407.1 mouse_genomes_project X 2359500 2365432 + MGP_LPJ_P0095199 Wdr45 protein_coding protein_coding MGP_LPJ_T0095200.1 MGP_LPJ_G0035407.1 mouse_genomes_project X 2359500 2363542 + MGP_LPJ_P0095200 Wdr45 protein_coding protein_coding MGP_LPJ_T0095201.1 MGP_LPJ_G0035407.1 mouse_genomes_project X 2359510 2365200 + MGP_LPJ_P0095201 Wdr45 protein_coding protein_coding MGP_LPJ_T0095202.1 MGP_LPJ_G0035407.1 mouse_genomes_project X 2359605 2361541 + MGP_LPJ_P0095202 Wdr45 protein_coding protein_coding MGP_LPJ_T0095203.1 MGP_LPJ_G0035407.1 mouse_genomes_project X 2359607 2363526 + MGP_LPJ_P0095203 Wdr45 protein_coding nonsense_mediated_decay MGP_LPJ_T0095204.1 MGP_LPJ_G0035407.1 mouse_genomes_project X 2359612 2363541 + MGP_LPJ_P0095204 Wdr45 protein_coding protein_coding MGP_LPJ_T0095205.1 MGP_LPJ_G0035407.1 mouse_genomes_project X 2359983 2363582 + Wdr45 protein_coding processed_transcript MGP_LPJ_T0095206.1 MGP_LPJ_G0035407.1 mouse_genomes_project X 2360177 2365253 + MGP_LPJ_P0095206 Wdr45 protein_coding protein_coding MGP_LPJ_T0095207.1 MGP_LPJ_G0035407.1 mouse_genomes_project X 2360580 2363277 + MGP_LPJ_P0095207 Wdr45 protein_coding protein_coding MGP_LPJ_T0095208.1 MGP_LPJ_G0035407.1 mouse_genomes_project X 2360794 2363130 + Wdr45 protein_coding processed_transcript MGP_LPJ_T0095209.1 MGP_LPJ_G0035407.1 mouse_genomes_project X 2363822 2364740 + Wdr45 protein_coding processed_transcript MGP_LPJ_T0096848.1 MGP_LPJ_G0035882.1 mouse_genomes_project X 101017673 101057652 + MGP_LPJ_P0096848 Chic1 protein_coding protein_coding MGP_LPJ_T0016415.1 MGP_LPJ_G0014506.1 mouse_genomes_project X 75556940 75559814 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016628.1 MGP_LPJ_G0014719.1 mouse_genomes_project X 114620347 114620650 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095487.1 MGP_LPJ_G0035487.1 mouse_genomes_project X 15844677 15862547 + MGP_LPJ_P0095487 Usp11 protein_coding protein_coding MGP_LPJ_T0095488.1 MGP_LPJ_G0035487.1 mouse_genomes_project X 15844705 15853925 + Usp11 protein_coding processed_transcript MGP_LPJ_T0095489.1 MGP_LPJ_G0035487.1 mouse_genomes_project X 15844731 15859693 + Usp11 protein_coding retained_intron MGP_LPJ_T0095490.1 MGP_LPJ_G0035487.1 mouse_genomes_project X 15852596 15862545 + Usp11 protein_coding retained_intron MGP_LPJ_T0096071.1 MGP_LPJ_G0035696.1 mouse_genomes_project X 69966182 69982086 + MGP_LPJ_P0096071 Zfp92 protein_coding protein_coding MGP_LPJ_T0096072.1 MGP_LPJ_G0035696.1 mouse_genomes_project X 69966646 69983473 + MGP_LPJ_P0096072 Zfp92 protein_coding protein_coding MGP_LPJ_T0016186.1 MGP_LPJ_G0014277.1 mouse_genomes_project X 11423542 11423929 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095714.1 MGP_LPJ_G0035567.1 mouse_genomes_project X 37915473 38559648 - MGP_LPJ_P0095714 Tenm1 protein_coding protein_coding MGP_LPJ_T0095715.1 MGP_LPJ_G0035567.1 mouse_genomes_project X 37915473 38559669 - MGP_LPJ_P0095715 Tenm1 protein_coding protein_coding MGP_LPJ_T0095716.1 MGP_LPJ_G0035567.1 mouse_genomes_project X 37919998 38661090 - MGP_LPJ_P0095716 Tenm1 protein_coding protein_coding MGP_LPJ_T0095717.1 MGP_LPJ_G0035567.1 mouse_genomes_project X 38211210 38821925 - Tenm1 protein_coding retained_intron MGP_LPJ_T0095718.1 MGP_LPJ_G0035567.1 mouse_genomes_project X 38285607 38822048 - Tenm1 protein_coding retained_intron MGP_LPJ_T0095719.1 MGP_LPJ_G0035567.1 mouse_genomes_project X 38716674 38821925 - Tenm1 protein_coding processed_transcript MGP_LPJ_T0095851.1 MGP_LPJ_G0035611.1 mouse_genomes_project X 48849880 48878811 + MGP_LPJ_P0095851 Fam122c protein_coding protein_coding MGP_LPJ_T0095852.1 MGP_LPJ_G0035611.1 mouse_genomes_project X 48849880 48908511 + MGP_LPJ_P0095852 Fam122c protein_coding nonsense_mediated_decay MGP_LPJ_T0095853.1 MGP_LPJ_G0035611.1 mouse_genomes_project X 48849889 48908511 + MGP_LPJ_P0095853 Fam122c protein_coding protein_coding MGP_LPJ_T0095599.1 MGP_LPJ_G0035529.1 mouse_genomes_project X 32599744 32605786 + MGP_LPJ_P0095599 protein_coding protein_coding MGP_LPJ_T0095264.1 MGP_LPJ_G0035416.1 mouse_genomes_project X 2537379 2544359 - MGP_LPJ_P0095264 Pqbp1 protein_coding protein_coding MGP_LPJ_T0095265.1 MGP_LPJ_G0035416.1 mouse_genomes_project X 2537443 2544069 - MGP_LPJ_P0095265 Pqbp1 protein_coding protein_coding MGP_LPJ_T0095266.1 MGP_LPJ_G0035416.1 mouse_genomes_project X 2538585 2544289 - MGP_LPJ_P0095266 Pqbp1 protein_coding protein_coding MGP_LPJ_T0095267.1 MGP_LPJ_G0035416.1 mouse_genomes_project X 2538668 2544090 - MGP_LPJ_P0095267 Pqbp1 protein_coding protein_coding MGP_LPJ_T0095268.1 MGP_LPJ_G0035416.1 mouse_genomes_project X 2540946 2543986 - MGP_LPJ_P0095268 Pqbp1 protein_coding protein_coding MGP_LPJ_T0095258.1 MGP_LPJ_G0035415.1 mouse_genomes_project X 2526905 2537353 + MGP_LPJ_P0095258 Slc35a2 protein_coding protein_coding MGP_LPJ_T0095259.1 MGP_LPJ_G0035415.1 mouse_genomes_project X 2527108 2537325 + MGP_LPJ_P0095259 Slc35a2 protein_coding protein_coding MGP_LPJ_T0095260.1 MGP_LPJ_G0035415.1 mouse_genomes_project X 2527187 2536888 + MGP_LPJ_P0095260 Slc35a2 protein_coding protein_coding MGP_LPJ_T0095261.1 MGP_LPJ_G0035415.1 mouse_genomes_project X 2527242 2537323 + MGP_LPJ_P0095261 Slc35a2 protein_coding protein_coding MGP_LPJ_T0095262.1 MGP_LPJ_G0035415.1 mouse_genomes_project X 2528700 2537321 + MGP_LPJ_P0095262 Slc35a2 protein_coding protein_coding MGP_LPJ_T0095263.1 MGP_LPJ_G0035415.1 mouse_genomes_project X 2535881 2537325 + Slc35a2 protein_coding processed_transcript MGP_LPJ_T0016846.1 MGP_LPJ_G0014937.1 mouse_genomes_project X 160645075 160645994 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097702.1 MGP_LPJ_G0036130.1 mouse_genomes_project X 160014685 160019624 - MGP_LPJ_P0097702 Gja6 protein_coding protein_coding MGP_LPJ_T0016139.1 MGP_LPJ_G0014230.1 mouse_genomes_project X 2145726 2146289 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096972.1 MGP_LPJ_G0035924.1 mouse_genomes_project X 108867569 108880179 + MGP_LPJ_P0096972 Cylc1 protein_coding protein_coding MGP_LPJ_T0016667.1 MGP_LPJ_G0014758.1 mouse_genomes_project X 125913816 125916611 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016529.1 MGP_LPJ_G0014620.1 mouse_genomes_project X 98991575 98992836 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016489.1 MGP_LPJ_G0014580.1 mouse_genomes_project X 91543355 91544056 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098383.1 MGP_LPJ_G0036664.1 mouse_genomes_project X 55032728 55032960 - Gm26351 ribozyme ribozyme MGP_LPJ_T0097273.1 MGP_LPJ_G0036028.1 mouse_genomes_project X 138163861 138235993 + MGP_LPJ_P0097273 Tbc1d8b protein_coding protein_coding MGP_LPJ_T0097275.1 MGP_LPJ_G0036028.1 mouse_genomes_project X 138217566 138227782 + Tbc1d8b protein_coding processed_transcript MGP_LPJ_T0096333.1 MGP_LPJ_G0035732.1 mouse_genomes_project X 70944066 70947022 - MGP_LPJ_P0096333 Ubl4a protein_coding protein_coding MGP_LPJ_T0096334.1 MGP_LPJ_G0035732.1 mouse_genomes_project X 70944067 70946907 - Ubl4a protein_coding processed_transcript MGP_LPJ_T0096335.1 MGP_LPJ_G0035732.1 mouse_genomes_project X 70945620 70946815 - MGP_LPJ_P0096335 Ubl4a protein_coding nonsense_mediated_decay MGP_LPJ_T0096336.1 MGP_LPJ_G0035732.1 mouse_genomes_project X 70945658 70946845 - Ubl4a protein_coding retained_intron MGP_LPJ_T0096337.1 MGP_LPJ_G0035732.1 mouse_genomes_project X 70945813 70951559 - MGP_LPJ_P0096337 Ubl4a protein_coding protein_coding MGP_LPJ_T0096338.1 MGP_LPJ_G0035732.1 mouse_genomes_project X 70946091 70946862 - Ubl4a protein_coding retained_intron MGP_LPJ_T0096339.1 MGP_LPJ_G0035732.1 mouse_genomes_project X 70946145 70946852 - Ubl4a protein_coding processed_transcript MGP_LPJ_T0016862.1 MGP_LPJ_G0014953.1 mouse_genomes_project X 164933899 164934278 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101148.1 MGP_LPJ_G0039411.1 mouse_genomes_project X 2158834 2158967 - Gm23082 snoRNA snoRNA MGP_LPJ_T0016276.1 MGP_LPJ_G0014367.1 mouse_genomes_project X 44705876 44706276 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096344.1 MGP_LPJ_G0035734.1 mouse_genomes_project X 70962863 70971490 - MGP_LPJ_P0096344 Fam3a protein_coding protein_coding MGP_LPJ_T0096345.1 MGP_LPJ_G0035734.1 mouse_genomes_project X 70962905 70971321 - MGP_LPJ_P0096345 Fam3a protein_coding protein_coding MGP_LPJ_T0096346.1 MGP_LPJ_G0035734.1 mouse_genomes_project X 70962905 70971221 - MGP_LPJ_P0096346 Fam3a protein_coding protein_coding MGP_LPJ_T0096347.1 MGP_LPJ_G0035734.1 mouse_genomes_project X 70963348 70971400 - MGP_LPJ_P0096347 Fam3a protein_coding protein_coding MGP_LPJ_T0096348.1 MGP_LPJ_G0035734.1 mouse_genomes_project X 70963446 70971321 - MGP_LPJ_P0096348 Fam3a protein_coding protein_coding MGP_LPJ_T0096349.1 MGP_LPJ_G0035734.1 mouse_genomes_project X 70964566 70971473 - MGP_LPJ_P0096349 Fam3a protein_coding protein_coding MGP_LPJ_T0096350.1 MGP_LPJ_G0035734.1 mouse_genomes_project X 70964776 70971321 - MGP_LPJ_P0096350 Fam3a protein_coding nonsense_mediated_decay MGP_LPJ_T0096351.1 MGP_LPJ_G0035734.1 mouse_genomes_project X 70965000 70965900 - Fam3a protein_coding retained_intron MGP_LPJ_T0096352.1 MGP_LPJ_G0035734.1 mouse_genomes_project X 70965056 70970968 - MGP_LPJ_P0096352 Fam3a protein_coding nonsense_mediated_decay MGP_LPJ_T0096353.1 MGP_LPJ_G0035734.1 mouse_genomes_project X 70965056 70970905 - MGP_LPJ_P0096353 Fam3a protein_coding protein_coding MGP_LPJ_T0102502.1 MGP_LPJ_G0040538.1 mouse_genomes_project X 83243226 83244259 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0095591.1 MGP_LPJ_G0035522.1 mouse_genomes_project X 32461472 32487024 + MGP_LPJ_P0095591 Nkap protein_coding protein_coding MGP_LPJ_T0095592.1 MGP_LPJ_G0035522.1 mouse_genomes_project X 32470947 32476401 + Nkap protein_coding retained_intron MGP_LPJ_T0099880.1 MGP_LPJ_G0038143.1 mouse_genomes_project X 14891050 14891157 - Gm23678 snRNA snRNA MGP_LPJ_T0005621.1 MGP_LPJ_G0004738.1 mouse_genomes_project X 82617179 82622034 + Gm14764 antisense antisense MGP_LPJ_T0097573.1 MGP_LPJ_G0036094.1 mouse_genomes_project X 152015411 152049658 + MGP_LPJ_P0097573 Rragb protein_coding protein_coding MGP_LPJ_T0097574.1 MGP_LPJ_G0036094.1 mouse_genomes_project X 152015417 152028633 + MGP_LPJ_P0097574 Rragb protein_coding protein_coding MGP_LPJ_T0011189.1 MGP_LPJ_G0009307.1 mouse_genomes_project X 63194389 63194470 - Mir465c-1 miRNA miRNA MGP_LPJ_T0009375.1 MGP_LPJ_G0007530.1 mouse_genomes_project X 5671687 5681986 - Gm10489 lincRNA lincRNA MGP_LPJ_T0095854.1 MGP_LPJ_G0035612.1 mouse_genomes_project X 48923500 48948166 - MGP_LPJ_P0095854 Mospd1 protein_coding protein_coding MGP_LPJ_T0099926.1 MGP_LPJ_G0038189.1 mouse_genomes_project X 119735332 119735440 + Gm24846 snRNA snRNA MGP_LPJ_T0095830.1 MGP_LPJ_G0035602.1 mouse_genomes_project X 47253633 47301837 - MGP_LPJ_P0095830 Usp26 protein_coding protein_coding MGP_LPJ_T0095831.1 MGP_LPJ_G0035602.1 mouse_genomes_project X 47253633 47301748 - MGP_LPJ_P0095831 Usp26 protein_coding protein_coding MGP_LPJ_T0098343.1 MGP_LPJ_G0036624.1 mouse_genomes_project X 722213 722332 + n-R5s2 rRNA rRNA MGP_LPJ_T0097620.1 MGP_LPJ_G0036114.1 mouse_genomes_project X 156623173 156626040 - MGP_LPJ_P0097620 Yy2 protein_coding protein_coding MGP_LPJ_T0101430.1 MGP_LPJ_G0039598.1 mouse_genomes_project X 16552536 16557897 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101431.1 MGP_LPJ_G0039598.1 mouse_genomes_project X 16552611 16554694 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0016212.1 MGP_LPJ_G0014303.1 mouse_genomes_project X 17504375 17504850 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097023.1 MGP_LPJ_G0035942.1 mouse_genomes_project X 116215077 116216107 - MGP_LPJ_P0097023 Tgif2lx2 protein_coding protein_coding MGP_LPJ_T0096684.1 MGP_LPJ_G0035838.1 mouse_genomes_project X 97963110 97985467 + Dgat2l6 protein_coding retained_intron MGP_LPJ_T0096685.1 MGP_LPJ_G0035838.1 mouse_genomes_project X 97963113 97985720 + MGP_LPJ_P0096685 Dgat2l6 protein_coding protein_coding MGP_LPJ_T0096650.1 MGP_LPJ_G0035829.1 mouse_genomes_project X 96336514 96346511 + MGP_LPJ_P0096650 Yipf6 protein_coding protein_coding MGP_LPJ_T0096651.1 MGP_LPJ_G0035829.1 mouse_genomes_project X 96337477 96345015 + MGP_LPJ_P0096651 Yipf6 protein_coding protein_coding MGP_LPJ_T0096652.1 MGP_LPJ_G0035829.1 mouse_genomes_project X 96337505 96340086 + MGP_LPJ_P0096652 Yipf6 protein_coding protein_coding MGP_LPJ_T0096653.1 MGP_LPJ_G0035829.1 mouse_genomes_project X 96337965 96346286 + Yipf6 protein_coding retained_intron MGP_LPJ_T0096654.1 MGP_LPJ_G0035829.1 mouse_genomes_project X 96337965 96350397 + MGP_LPJ_P0096654 Yipf6 protein_coding protein_coding MGP_LPJ_T0096655.1 MGP_LPJ_G0035829.1 mouse_genomes_project X 96338411 96345415 + Yipf6 protein_coding retained_intron MGP_LPJ_T0011176.1 MGP_LPJ_G0009294.1 mouse_genomes_project X 63141953 63142018 - Mir742 miRNA miRNA MGP_LPJ_T0096609.1 MGP_LPJ_G0035819.1 mouse_genomes_project X 93306855 93330205 - MGP_LPJ_P0096609 Las1l protein_coding protein_coding MGP_LPJ_T0096610.1 MGP_LPJ_G0035819.1 mouse_genomes_project X 93306855 93330205 - MGP_LPJ_P0096610 Las1l protein_coding protein_coding MGP_LPJ_T0096611.1 MGP_LPJ_G0035819.1 mouse_genomes_project X 93312210 93330178 - Las1l protein_coding retained_intron MGP_LPJ_T0096612.1 MGP_LPJ_G0035819.1 mouse_genomes_project X 93318147 93319902 - Las1l protein_coding processed_transcript MGP_LPJ_T0096613.1 MGP_LPJ_G0035819.1 mouse_genomes_project X 93318635 93322757 - Las1l protein_coding processed_transcript MGP_LPJ_T0096614.1 MGP_LPJ_G0035819.1 mouse_genomes_project X 93321133 93330254 - Las1l protein_coding retained_intron MGP_LPJ_T0099892.1 MGP_LPJ_G0038155.1 mouse_genomes_project X 43803981 43804085 + Gm22528 snRNA snRNA MGP_LPJ_T0097199.1 MGP_LPJ_G0036004.1 mouse_genomes_project X 134563235 134565351 + MGP_LPJ_P0097199 Ngfrap1 protein_coding protein_coding MGP_LPJ_T0097200.1 MGP_LPJ_G0036004.1 mouse_genomes_project X 134563243 134565351 + MGP_LPJ_P0097200 Ngfrap1 protein_coding protein_coding MGP_LPJ_T0097201.1 MGP_LPJ_G0036004.1 mouse_genomes_project X 134563287 134565337 + MGP_LPJ_P0097201 Ngfrap1 protein_coding protein_coding MGP_LPJ_T0097202.1 MGP_LPJ_G0036004.1 mouse_genomes_project X 134564252 134565291 + MGP_LPJ_P0097202 Ngfrap1 protein_coding protein_coding MGP_LPJ_T0016497.1 MGP_LPJ_G0014588.1 mouse_genomes_project X 92028043 92028743 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016462.1 MGP_LPJ_G0014553.1 mouse_genomes_project X 86879147 86879397 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095999.1 MGP_LPJ_G0035671.1 mouse_genomes_project X 67677113 67781835 + MGP_LPJ_P0095999 Mtm1 protein_coding protein_coding MGP_LPJ_T0096000.1 MGP_LPJ_G0035671.1 mouse_genomes_project X 67683693 67781835 + MGP_LPJ_P0096000 Mtm1 protein_coding protein_coding MGP_LPJ_T0096001.1 MGP_LPJ_G0035671.1 mouse_genomes_project X 67683693 67781835 + MGP_LPJ_P0096001 Mtm1 protein_coding protein_coding MGP_LPJ_T0096002.1 MGP_LPJ_G0035671.1 mouse_genomes_project X 67683693 67727806 + MGP_LPJ_P0096002 Mtm1 protein_coding protein_coding MGP_LPJ_T0096003.1 MGP_LPJ_G0035671.1 mouse_genomes_project X 67683715 67781828 + MGP_LPJ_P0096003 Mtm1 protein_coding protein_coding MGP_LPJ_T0096004.1 MGP_LPJ_G0035671.1 mouse_genomes_project X 67683718 67765492 + Mtm1 protein_coding retained_intron MGP_LPJ_T0096005.1 MGP_LPJ_G0035671.1 mouse_genomes_project X 67683723 67763969 + Mtm1 protein_coding retained_intron MGP_LPJ_T0096006.1 MGP_LPJ_G0035671.1 mouse_genomes_project X 67683726 67781805 + MGP_LPJ_P0096006 Mtm1 protein_coding protein_coding MGP_LPJ_T0096007.1 MGP_LPJ_G0035671.1 mouse_genomes_project X 67683746 67776853 + Mtm1 protein_coding retained_intron MGP_LPJ_T0096008.1 MGP_LPJ_G0035671.1 mouse_genomes_project X 67683769 67781805 + MGP_LPJ_P0096008 Mtm1 protein_coding protein_coding MGP_LPJ_T0096009.1 MGP_LPJ_G0035671.1 mouse_genomes_project X 67683772 67705382 + Mtm1 protein_coding retained_intron MGP_LPJ_T0096010.1 MGP_LPJ_G0035671.1 mouse_genomes_project X 67683772 67723447 + Mtm1 protein_coding retained_intron MGP_LPJ_T0096011.1 MGP_LPJ_G0035671.1 mouse_genomes_project X 67767999 67782231 + Mtm1 protein_coding retained_intron MGP_LPJ_T0096043.1 MGP_LPJ_G0035681.1 mouse_genomes_project X 68736498 68737446 + MGP_LPJ_P0096043 Magea4 protein_coding protein_coding MGP_LPJ_T0016547.1 MGP_LPJ_G0014638.1 mouse_genomes_project X 100948571 100949643 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016873.1 MGP_LPJ_G0014964.1 mouse_genomes_project X 167279938 167280658 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016177.1 MGP_LPJ_G0014268.1 mouse_genomes_project X 8346663 8349566 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016218.1 MGP_LPJ_G0014309.1 mouse_genomes_project X 27309123 27309561 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002503.1 MGP_LPJ_G0002409.1 mouse_genomes_project X 101257832 101262513 - TEC TEC MGP_LPJ_T0099879.1 MGP_LPJ_G0038142.1 mouse_genomes_project X 14498115 14498222 + Gm22783 snRNA snRNA MGP_LPJ_T0009434.1 MGP_LPJ_G0007567.1 mouse_genomes_project X 115248547 115248916 + Gm28579 lincRNA lincRNA MGP_LPJ_T0016439.1 MGP_LPJ_G0014530.1 mouse_genomes_project X 82699003 82699262 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098346.1 MGP_LPJ_G0036627.1 mouse_genomes_project X 13520504 13520623 - n-R5s5 rRNA rRNA MGP_LPJ_T0016847.1 MGP_LPJ_G0014938.1 mouse_genomes_project X 161765746 161766200 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016876.1 MGP_LPJ_G0014967.1 mouse_genomes_project X 167834981 167835314 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016587.1 MGP_LPJ_G0014678.1 mouse_genomes_project X 105193549 105193864 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016514.1 MGP_LPJ_G0014605.1 mouse_genomes_project X 95406074 95407959 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016205.1 MGP_LPJ_G0014296.1 mouse_genomes_project X 15993498 15993868 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095551.1 MGP_LPJ_G0035508.1 mouse_genomes_project X 31456795 31460497 + MGP_LPJ_P0095551 Zcchc12 protein_coding protein_coding MGP_LPJ_T0095552.1 MGP_LPJ_G0035508.1 mouse_genomes_project X 31456837 31460505 + MGP_LPJ_P0095552 Zcchc12 protein_coding protein_coding MGP_LPJ_T0095553.1 MGP_LPJ_G0035508.1 mouse_genomes_project X 31456850 31460504 + MGP_LPJ_P0095553 Zcchc12 protein_coding protein_coding MGP_LPJ_T0095554.1 MGP_LPJ_G0035508.1 mouse_genomes_project X 31456877 31460504 + MGP_LPJ_P0095554 Zcchc12 protein_coding protein_coding MGP_LPJ_T0005628.1 MGP_LPJ_G0004744.1 mouse_genomes_project X 101092320 101150826 + Tsix antisense antisense MGP_LPJ_T0097712.1 MGP_LPJ_G0036133.1 mouse_genomes_project X 160998488 161326312 - MGP_LPJ_P0097712 Nhs protein_coding protein_coding MGP_LPJ_T0097713.1 MGP_LPJ_G0036133.1 mouse_genomes_project X 161002007 161325970 - MGP_LPJ_P0097713 Nhs protein_coding protein_coding MGP_LPJ_T0101162.1 MGP_LPJ_G0039425.1 mouse_genomes_project X 70309457 70309580 + Gm25226 snoRNA snoRNA MGP_LPJ_T0016743.1 MGP_LPJ_G0014834.1 mouse_genomes_project X 140475082 140475340 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095357.1 MGP_LPJ_G0035448.1 mouse_genomes_project X 4563173 4571899 - MGP_LPJ_P0095357 Dynlt3 protein_coding protein_coding MGP_LPJ_T0095358.1 MGP_LPJ_G0035448.1 mouse_genomes_project X 4564913 4568525 - Dynlt3 protein_coding processed_transcript MGP_LPJ_T0095359.1 MGP_LPJ_G0035448.1 mouse_genomes_project X 4565184 4571899 - Dynlt3 protein_coding processed_transcript MGP_LPJ_T0095360.1 MGP_LPJ_G0035448.1 mouse_genomes_project X 4565246 4566266 - Dynlt3 protein_coding processed_transcript MGP_LPJ_T0016423.1 MGP_LPJ_G0014514.1 mouse_genomes_project X 77693818 77693951 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016649.1 MGP_LPJ_G0014740.1 mouse_genomes_project X 118218351 118219003 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095875.1 MGP_LPJ_G0035625.1 mouse_genomes_project X 52410572 52411263 + MGP_LPJ_P0095875 Gm10477 protein_coding protein_coding MGP_LPJ_T0096452.1 MGP_LPJ_G0035763.1 mouse_genomes_project X 73315437 73324986 - MGP_LPJ_P0096452 Cldn34d protein_coding protein_coding MGP_LPJ_T0016237.1 MGP_LPJ_G0014328.1 mouse_genomes_project X 35367646 35368075 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018591.1 MGP_LPJ_G0015700.1 mouse_genomes_project X 70353078 70355478 + Gm14817 processed_transcript processed_transcript MGP_LPJ_T0096379.1 MGP_LPJ_G0035740.1 mouse_genomes_project X 71198897 71199845 + MGP_LPJ_P0096379 Olfr1325 protein_coding protein_coding MGP_LPJ_T0097595.1 MGP_LPJ_G0036106.1 mouse_genomes_project X 154199051 154202366 - protein_coding retained_intron MGP_LPJ_T0097596.1 MGP_LPJ_G0036106.1 mouse_genomes_project X 154201488 154202361 - protein_coding retained_intron MGP_LPJ_T0016593.1 MGP_LPJ_G0014684.1 mouse_genomes_project X 107210932 107214271 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016470.1 MGP_LPJ_G0014561.1 mouse_genomes_project X 88539516 88540551 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016730.1 MGP_LPJ_G0014821.1 mouse_genomes_project X 139129713 139130167 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002506.1 MGP_LPJ_G0002412.1 mouse_genomes_project X 126248541 126249606 + TEC TEC MGP_LPJ_T0018593.1 MGP_LPJ_G0015702.1 mouse_genomes_project X 98179137 98182727 - Gm14866 processed_transcript processed_transcript MGP_LPJ_T0016864.1 MGP_LPJ_G0014955.1 mouse_genomes_project X 165302676 165304608 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095963.1 MGP_LPJ_G0035657.1 mouse_genomes_project X 63006956 63019023 + MGP_LPJ_P0095963 Slitrk2 protein_coding protein_coding MGP_LPJ_T0095964.1 MGP_LPJ_G0035657.1 mouse_genomes_project X 63010637 63014119 + MGP_LPJ_P0095964 Slitrk2 protein_coding protein_coding MGP_LPJ_T0011227.1 MGP_LPJ_G0009345.1 mouse_genomes_project X 138800275 138800340 + Mir3475 miRNA miRNA MGP_LPJ_T0016513.1 MGP_LPJ_G0014604.1 mouse_genomes_project X 95216018 95216745 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102529.1 MGP_LPJ_G0040565.1 mouse_genomes_project X 158160746 158163357 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0016174.1 MGP_LPJ_G0014265.1 mouse_genomes_project X 7961271 7962528 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016783.1 MGP_LPJ_G0014874.1 mouse_genomes_project X 149477704 149480170 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016435.1 MGP_LPJ_G0014526.1 mouse_genomes_project X 82589269 82589855 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096863.1 MGP_LPJ_G0035890.1 mouse_genomes_project X 102182648 102207363 + MGP_LPJ_P0096863 Uprt protein_coding protein_coding MGP_LPJ_T0099928.1 MGP_LPJ_G0038191.1 mouse_genomes_project X 125181482 125181587 + Gm22139 snRNA snRNA MGP_LPJ_T0009443.1 MGP_LPJ_G0007575.1 mouse_genomes_project X 149637269 149637810 - Gm27191 lincRNA lincRNA MGP_LPJ_T0016226.1 MGP_LPJ_G0014317.1 mouse_genomes_project X 32113555 32113712 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096618.1 MGP_LPJ_G0035821.1 mouse_genomes_project X 93633233 93662111 - MGP_LPJ_P0096618 Vsig4 protein_coding protein_coding MGP_LPJ_T0096619.1 MGP_LPJ_G0035821.1 mouse_genomes_project X 93635980 93662085 - Vsig4 protein_coding processed_transcript MGP_LPJ_T0016729.1 MGP_LPJ_G0014820.1 mouse_genomes_project X 138946162 138946991 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096696.1 MGP_LPJ_G0035842.1 mouse_genomes_project X 98064362 98067418 - Pdzd11 protein_coding retained_intron MGP_LPJ_T0096697.1 MGP_LPJ_G0035842.1 mouse_genomes_project X 98064365 98068048 - MGP_LPJ_P0096697 Pdzd11 protein_coding protein_coding MGP_LPJ_T0096698.1 MGP_LPJ_G0035842.1 mouse_genomes_project X 98064387 98067415 - MGP_LPJ_P0096698 Pdzd11 protein_coding protein_coding MGP_LPJ_T0096699.1 MGP_LPJ_G0035842.1 mouse_genomes_project X 98064856 98067751 - Pdzd11 protein_coding processed_transcript MGP_LPJ_T0009388.1 MGP_LPJ_G0007538.1 mouse_genomes_project X 16552536 16557897 - Gm26593 lincRNA lincRNA MGP_LPJ_T0096668.1 MGP_LPJ_G0035834.1 mouse_genomes_project X 97414592 97728718 + Eda protein_coding retained_intron MGP_LPJ_T0096669.1 MGP_LPJ_G0035834.1 mouse_genomes_project X 97414592 97820228 + MGP_LPJ_P0096669 Eda protein_coding protein_coding MGP_LPJ_T0096670.1 MGP_LPJ_G0035834.1 mouse_genomes_project X 97414592 97820228 + MGP_LPJ_P0096670 Eda protein_coding protein_coding MGP_LPJ_T0096671.1 MGP_LPJ_G0035834.1 mouse_genomes_project X 97414592 97820226 + MGP_LPJ_P0096671 Eda protein_coding protein_coding MGP_LPJ_T0096672.1 MGP_LPJ_G0035834.1 mouse_genomes_project X 97414592 97820225 + MGP_LPJ_P0096672 Eda protein_coding protein_coding MGP_LPJ_T0096673.1 MGP_LPJ_G0035834.1 mouse_genomes_project X 97414592 97820225 + MGP_LPJ_P0096673 Eda protein_coding protein_coding MGP_LPJ_T0096674.1 MGP_LPJ_G0035834.1 mouse_genomes_project X 97414592 97820226 + MGP_LPJ_P0096674 Eda protein_coding protein_coding MGP_LPJ_T0096675.1 MGP_LPJ_G0035834.1 mouse_genomes_project X 97414592 97820226 + MGP_LPJ_P0096675 Eda protein_coding protein_coding MGP_LPJ_T0096676.1 MGP_LPJ_G0035834.1 mouse_genomes_project X 97414767 97816622 + MGP_LPJ_P0096676 Eda protein_coding protein_coding MGP_LPJ_T0096677.1 MGP_LPJ_G0035834.1 mouse_genomes_project X 97414767 97815278 + MGP_LPJ_P0096677 Eda protein_coding protein_coding MGP_LPJ_T0096678.1 MGP_LPJ_G0035834.1 mouse_genomes_project X 97805208 97813904 + Eda protein_coding processed_transcript MGP_LPJ_T0096679.1 MGP_LPJ_G0035834.1 mouse_genomes_project X 97806720 97814502 + Eda protein_coding processed_transcript MGP_LPJ_T0016424.1 MGP_LPJ_G0014515.1 mouse_genomes_project X 78065097 78065820 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101179.1 MGP_LPJ_G0039442.1 mouse_genomes_project X 114472260 114472375 + Gm24438 snoRNA snoRNA MGP_LPJ_T0095866.1 MGP_LPJ_G0035622.1 mouse_genomes_project X 52218260 52237441 + MGP_LPJ_P0095866 Zfp449 protein_coding protein_coding MGP_LPJ_T0096033.1 MGP_LPJ_G0035677.1 mouse_genomes_project X 68465459 68482666 + MGP_LPJ_P0096033 Gm1141 protein_coding protein_coding MGP_LPJ_T0096034.1 MGP_LPJ_G0035677.1 mouse_genomes_project X 68471106 68478721 + MGP_LPJ_P0096034 Gm1141 protein_coding protein_coding MGP_LPJ_T0101667.1 MGP_LPJ_G0039711.1 mouse_genomes_project X 100823240 100895933 - unitary_pseudogene processed_transcript MGP_LPJ_T0101668.1 MGP_LPJ_G0039711.1 mouse_genomes_project X 100866612 100895933 - unitary_pseudogene unitary_pseudogene MGP_LPJ_T0101669.1 MGP_LPJ_G0039711.1 mouse_genomes_project X 100866612 100964442 - unitary_pseudogene processed_transcript MGP_LPJ_T0101670.1 MGP_LPJ_G0039711.1 mouse_genomes_project X 100866678 100892366 - unitary_pseudogene processed_transcript MGP_LPJ_T0101671.1 MGP_LPJ_G0039711.1 mouse_genomes_project X 100867966 100895925 - unitary_pseudogene retained_intron MGP_LPJ_T0101672.1 MGP_LPJ_G0039711.1 mouse_genomes_project X 100870308 100941714 - unitary_pseudogene processed_transcript MGP_LPJ_T0101673.1 MGP_LPJ_G0039711.1 mouse_genomes_project X 100870319 100931001 - unitary_pseudogene processed_transcript MGP_LPJ_T0018567.1 MGP_LPJ_G0015695.1 mouse_genomes_project X 46029864 46039718 - processed_transcript processed_transcript MGP_LPJ_T0018568.1 MGP_LPJ_G0015695.1 mouse_genomes_project X 46029864 46116229 - processed_transcript processed_transcript MGP_LPJ_T0018569.1 MGP_LPJ_G0015695.1 mouse_genomes_project X 46029871 46037616 - processed_transcript processed_transcript MGP_LPJ_T0018570.1 MGP_LPJ_G0015695.1 mouse_genomes_project X 46033072 46035773 - processed_transcript processed_transcript MGP_LPJ_T0018571.1 MGP_LPJ_G0015695.1 mouse_genomes_project X 46100303 46116271 - processed_transcript processed_transcript MGP_LPJ_T0018572.1 MGP_LPJ_G0015695.1 mouse_genomes_project X 46107418 46116279 - processed_transcript processed_transcript MGP_LPJ_T0018573.1 MGP_LPJ_G0015695.1 mouse_genomes_project X 46107418 46116289 - processed_transcript processed_transcript MGP_LPJ_T0005601.1 MGP_LPJ_G0004720.1 mouse_genomes_project X 5682216 5683454 - Gm14493 antisense antisense MGP_LPJ_T0016517.1 MGP_LPJ_G0014608.1 mouse_genomes_project X 96365645 96366040 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096575.1 MGP_LPJ_G0035810.1 mouse_genomes_project X 91766055 91772725 - MGP_LPJ_P0096575 Maged1 protein_coding protein_coding MGP_LPJ_T0096576.1 MGP_LPJ_G0035810.1 mouse_genomes_project X 91766057 91768417 - Maged1 protein_coding retained_intron MGP_LPJ_T0096577.1 MGP_LPJ_G0035810.1 mouse_genomes_project X 91766057 91772572 - Maged1 protein_coding retained_intron MGP_LPJ_T0096578.1 MGP_LPJ_G0035810.1 mouse_genomes_project X 91766057 91768146 - Maged1 protein_coding retained_intron MGP_LPJ_T0096579.1 MGP_LPJ_G0035810.1 mouse_genomes_project X 91766663 91768466 - Maged1 protein_coding retained_intron MGP_LPJ_T0096580.1 MGP_LPJ_G0035810.1 mouse_genomes_project X 91768256 91769408 - Maged1 protein_coding retained_intron MGP_LPJ_T0096581.1 MGP_LPJ_G0035810.1 mouse_genomes_project X 91771075 91772585 - Maged1 protein_coding retained_intron MGP_LPJ_T0097368.1 MGP_LPJ_G0036058.1 mouse_genomes_project X 142308819 142336359 - MGP_LPJ_P0097368 Capn6 protein_coding protein_coding MGP_LPJ_T0097369.1 MGP_LPJ_G0036058.1 mouse_genomes_project X 142324970 142336277 - Capn6 protein_coding retained_intron MGP_LPJ_T0097407.1 MGP_LPJ_G0036067.1 mouse_genomes_project X 145993949 146043480 - MGP_LPJ_P0097407 protein_coding protein_coding MGP_LPJ_T0097408.1 MGP_LPJ_G0036067.1 mouse_genomes_project X 145993954 146087817 - MGP_LPJ_P0097408 protein_coding protein_coding MGP_LPJ_T0097409.1 MGP_LPJ_G0036067.1 mouse_genomes_project X 145993961 146022611 - protein_coding retained_intron MGP_LPJ_T0097410.1 MGP_LPJ_G0036067.1 mouse_genomes_project X 145993961 146087786 - MGP_LPJ_P0097410 protein_coding protein_coding MGP_LPJ_T0097411.1 MGP_LPJ_G0036067.1 mouse_genomes_project X 145996396 146050430 - MGP_LPJ_P0097411 protein_coding protein_coding MGP_LPJ_T0097412.1 MGP_LPJ_G0036067.1 mouse_genomes_project X 145996540 146086471 - MGP_LPJ_P0097412 protein_coding unknown_likely_coding MGP_LPJ_T0097413.1 MGP_LPJ_G0036067.1 mouse_genomes_project X 146008864 146028049 - protein_coding processed_transcript MGP_LPJ_T0095788.1 MGP_LPJ_G0035587.1 mouse_genomes_project X 44249448 44258155 + MGP_LPJ_P0095788 Rbmx2 protein_coding protein_coding MGP_LPJ_T0095789.1 MGP_LPJ_G0035587.1 mouse_genomes_project X 44254024 44256668 + Rbmx2 protein_coding processed_transcript MGP_LPJ_T0016725.1 MGP_LPJ_G0014816.1 mouse_genomes_project X 138191412 138192199 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016372.1 MGP_LPJ_G0014463.1 mouse_genomes_project X 67220129 67220734 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011135.1 MGP_LPJ_G0009253.1 mouse_genomes_project X 1838344 1838409 - Mir362 miRNA miRNA MGP_LPJ_T0096058.1 MGP_LPJ_G0035688.1 mouse_genomes_project X 69536542 69580747 + MGP_LPJ_P0096058 Zfp185 protein_coding protein_coding MGP_LPJ_T0096059.1 MGP_LPJ_G0035688.1 mouse_genomes_project X 69536563 69580747 + MGP_LPJ_P0096059 Zfp185 protein_coding protein_coding MGP_LPJ_T0096060.1 MGP_LPJ_G0035688.1 mouse_genomes_project X 69537456 69546609 + MGP_LPJ_P0096060 Zfp185 protein_coding protein_coding MGP_LPJ_T0095811.1 MGP_LPJ_G0035596.1 mouse_genomes_project X 45917335 45918334 - MGP_LPJ_P0095811 Olfr1324 protein_coding protein_coding MGP_LPJ_T0016749.1 MGP_LPJ_G0014840.1 mouse_genomes_project X 140898896 140899106 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095878.1 MGP_LPJ_G0035628.1 mouse_genomes_project X 52496616 52521724 + MGP_LPJ_P0095878 Slc9a6 protein_coding protein_coding MGP_LPJ_T0095879.1 MGP_LPJ_G0035628.1 mouse_genomes_project X 52496634 52551677 + MGP_LPJ_P0095879 Slc9a6 protein_coding protein_coding MGP_LPJ_T0095880.1 MGP_LPJ_G0035628.1 mouse_genomes_project X 52496676 52551288 + MGP_LPJ_P0095880 Slc9a6 protein_coding protein_coding MGP_LPJ_T0095881.1 MGP_LPJ_G0035628.1 mouse_genomes_project X 52545691 52551276 + Slc9a6 protein_coding retained_intron MGP_LPJ_T0099888.1 MGP_LPJ_G0038151.1 mouse_genomes_project X 34665816 34665921 - Gm26437 snRNA snRNA MGP_LPJ_T0016687.1 MGP_LPJ_G0014778.1 mouse_genomes_project X 132079531 132081160 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016500.1 MGP_LPJ_G0014591.1 mouse_genomes_project X 92559056 92561047 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009415.1 MGP_LPJ_G0007560.1 mouse_genomes_project X 101123702 101131503 - Xist lincRNA lincRNA MGP_LPJ_T0009416.1 MGP_LPJ_G0007560.1 mouse_genomes_project X 101123834 101149086 - Xist lincRNA lincRNA MGP_LPJ_T0009417.1 MGP_LPJ_G0007560.1 mouse_genomes_project X 101133649 101134601 - Xist lincRNA lincRNA MGP_LPJ_T0016845.1 MGP_LPJ_G0014936.1 mouse_genomes_project X 160426274 160426878 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016150.1 MGP_LPJ_G0014241.1 mouse_genomes_project X 3733238 3734735 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101151.1 MGP_LPJ_G0039414.1 mouse_genomes_project X 32391384 32391515 - Snora69 snoRNA snoRNA MGP_LPJ_T0096660.1 MGP_LPJ_G0035831.1 mouse_genomes_project X 96547203 96560041 + MGP_LPJ_P0096660 Efnb1 protein_coding protein_coding MGP_LPJ_T0096661.1 MGP_LPJ_G0035831.1 mouse_genomes_project X 96549200 96558280 + Efnb1 protein_coding processed_transcript MGP_LPJ_T0016270.1 MGP_LPJ_G0014361.1 mouse_genomes_project X 42932054 42933059 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096038.1 MGP_LPJ_G0035679.1 mouse_genomes_project X 68515045 68531207 + MGP_LPJ_P0096038 Fate1 protein_coding protein_coding MGP_LPJ_T0096039.1 MGP_LPJ_G0035679.1 mouse_genomes_project X 68523740 68531207 + MGP_LPJ_P0096039 Fate1 protein_coding protein_coding MGP_LPJ_T0096040.1 MGP_LPJ_G0035679.1 mouse_genomes_project X 68525369 68530929 + Fate1 protein_coding processed_transcript MGP_LPJ_T0101159.1 MGP_LPJ_G0039422.1 mouse_genomes_project X 64963333 64963459 + Gm22332 snoRNA snoRNA MGP_LPJ_T0009444.1 MGP_LPJ_G0007576.1 mouse_genomes_project X 149988116 149990181 + Gm15138 lincRNA lincRNA MGP_LPJ_T0016292.1 MGP_LPJ_G0014383.1 mouse_genomes_project X 49422019 49422220 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016589.1 MGP_LPJ_G0014680.1 mouse_genomes_project X 106298592 106301472 + processed_pseudogene processed_pseudogene MGP_LPJ_T0018640.1 MGP_LPJ_G0015716.1 mouse_genomes_project X 161930649 161932185 - Gm15201 processed_transcript processed_transcript MGP_LPJ_T0097405.1 MGP_LPJ_G0036066.1 mouse_genomes_project X 145908381 145954844 - MGP_LPJ_P0097405 Il13ra2 protein_coding protein_coding MGP_LPJ_T0097406.1 MGP_LPJ_G0036066.1 mouse_genomes_project X 145908383 145929698 - MGP_LPJ_P0097406 Il13ra2 protein_coding protein_coding MGP_LPJ_T0102505.1 MGP_LPJ_G0040541.1 mouse_genomes_project X 83316007 83317048 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0095305.1 MGP_LPJ_G0035427.1 mouse_genomes_project X 2807406 2809640 - Rbm3 protein_coding processed_transcript MGP_LPJ_T0095306.1 MGP_LPJ_G0035427.1 mouse_genomes_project X 2807409 2813551 - MGP_LPJ_P0095306 Rbm3 protein_coding protein_coding MGP_LPJ_T0095307.1 MGP_LPJ_G0035427.1 mouse_genomes_project X 2809215 2813533 - MGP_LPJ_P0095307 Rbm3 protein_coding protein_coding MGP_LPJ_T0095308.1 MGP_LPJ_G0035427.1 mouse_genomes_project X 2810881 2813551 - MGP_LPJ_P0095308 Rbm3 protein_coding nonsense_mediated_decay MGP_LPJ_T0095309.1 MGP_LPJ_G0035427.1 mouse_genomes_project X 2811104 2813576 - Rbm3 protein_coding retained_intron MGP_LPJ_T0095310.1 MGP_LPJ_G0035427.1 mouse_genomes_project X 2812327 2813613 - Rbm3 protein_coding retained_intron MGP_LPJ_T0099899.1 MGP_LPJ_G0038162.1 mouse_genomes_project X 56214036 56214143 + Gm22287 snRNA snRNA MGP_LPJ_T0095951.1 MGP_LPJ_G0035649.1 mouse_genomes_project X 57713353 57714812 + MGP_LPJ_P0095951 Ldoc1 protein_coding protein_coding MGP_LPJ_T0016540.1 MGP_LPJ_G0014631.1 mouse_genomes_project X 100588495 100588743 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095269.1 MGP_LPJ_G0035417.1 mouse_genomes_project X 2544446 2554765 + MGP_LPJ_P0095269 Timm17b protein_coding protein_coding MGP_LPJ_T0095270.1 MGP_LPJ_G0035417.1 mouse_genomes_project X 2544760 2552744 + MGP_LPJ_P0095270 Timm17b protein_coding protein_coding MGP_LPJ_T0095271.1 MGP_LPJ_G0035417.1 mouse_genomes_project X 2552527 2553384 + Timm17b protein_coding retained_intron MGP_LPJ_T0009435.1 MGP_LPJ_G0007568.1 mouse_genomes_project X 117454374 117456400 - Gm14929 lincRNA lincRNA MGP_LPJ_T0096487.1 MGP_LPJ_G0035779.1 mouse_genomes_project X 78212317 78252146 - MGP_LPJ_P0096487 4930595M18Rik protein_coding protein_coding MGP_LPJ_T0097121.1 MGP_LPJ_G0035975.1 mouse_genomes_project X 132760830 132772459 + MGP_LPJ_P0097121 Armcx4 protein_coding protein_coding MGP_LPJ_T0097566.1 MGP_LPJ_G0036090.1 mouse_genomes_project X 151642898 151662955 + Gpr143 protein_coding processed_transcript MGP_LPJ_T0097567.1 MGP_LPJ_G0036090.1 mouse_genomes_project X 151642963 151675983 + MGP_LPJ_P0097567 Gpr143 protein_coding protein_coding MGP_LPJ_T0097568.1 MGP_LPJ_G0036090.1 mouse_genomes_project X 151642995 151654137 + Gpr143 protein_coding retained_intron MGP_LPJ_T0097328.1 MGP_LPJ_G0036044.1 mouse_genomes_project X 139569693 139880307 - MGP_LPJ_P0097328 Col4a6 protein_coding protein_coding MGP_LPJ_T0097329.1 MGP_LPJ_G0036044.1 mouse_genomes_project X 139590457 139611866 - Col4a6 protein_coding processed_transcript MGP_LPJ_T0097330.1 MGP_LPJ_G0036044.1 mouse_genomes_project X 139594011 139596896 - Col4a6 protein_coding retained_intron MGP_LPJ_T0016426.1 MGP_LPJ_G0014517.1 mouse_genomes_project X 79193278 79193564 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016681.1 MGP_LPJ_G0014772.1 mouse_genomes_project X 130160402 130161345 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101190.1 MGP_LPJ_G0039453.1 mouse_genomes_project X 133741250 133741364 - snoRNA snoRNA MGP_LPJ_T0016264.1 MGP_LPJ_G0014355.1 mouse_genomes_project X 40937436 40939886 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095595.1 MGP_LPJ_G0035525.1 mouse_genomes_project X 32539659 32540882 + MGP_LPJ_P0095595 Rnf113a1 protein_coding protein_coding MGP_LPJ_T0016704.1 MGP_LPJ_G0014795.1 mouse_genomes_project X 134883980 134885493 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009402.1 MGP_LPJ_G0007548.1 mouse_genomes_project X 65073357 65085907 - Fmr1os lincRNA lincRNA MGP_LPJ_T0016657.1 MGP_LPJ_G0014748.1 mouse_genomes_project X 119926921 119928478 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011203.1 MGP_LPJ_G0009321.1 mouse_genomes_project X 70896154 70896222 + Mir7092 miRNA miRNA MGP_LPJ_T0095274.1 MGP_LPJ_G0035420.1 mouse_genomes_project X 2573995 2578327 - MGP_LPJ_P0095274 Eras protein_coding protein_coding MGP_LPJ_T0096533.1 MGP_LPJ_G0035798.1 mouse_genomes_project X 90296717 90297411 + MGP_LPJ_P0096533 1700084M14Rik protein_coding protein_coding MGP_LPJ_T0095348.1 MGP_LPJ_G0035443.1 mouse_genomes_project X 3928251 3928929 + MGP_LPJ_P0095348 protein_coding protein_coding MGP_LPJ_T0099925.1 MGP_LPJ_G0038188.1 mouse_genomes_project X 114051278 114051442 + Gm24624 snRNA snRNA MGP_LPJ_T0096837.1 MGP_LPJ_G0035876.1 mouse_genomes_project X 100414569 100420288 - MGP_LPJ_P0096837 protein_coding protein_coding MGP_LPJ_T0096838.1 MGP_LPJ_G0035876.1 mouse_genomes_project X 100417250 100421070 - MGP_LPJ_P0096838 protein_coding protein_coding MGP_LPJ_T0096444.1 MGP_LPJ_G0035756.1 mouse_genomes_project X 72986686 72993911 + MGP_LPJ_P0096444 protein_coding protein_coding MGP_LPJ_T0011206.1 MGP_LPJ_G0009324.1 mouse_genomes_project X 91484046 91484110 + Mir7673 miRNA miRNA MGP_LPJ_T0102509.1 MGP_LPJ_G0040545.1 mouse_genomes_project X 92050400 92073245 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0096620.1 MGP_LPJ_G0035822.1 mouse_genomes_project X 93674851 93827938 - MGP_LPJ_P0096620 Hsf3 protein_coding protein_coding MGP_LPJ_T0096621.1 MGP_LPJ_G0035822.1 mouse_genomes_project X 93675540 93732871 - MGP_LPJ_P0096621 Hsf3 protein_coding protein_coding MGP_LPJ_T0096622.1 MGP_LPJ_G0035822.1 mouse_genomes_project X 93676038 93827927 - MGP_LPJ_P0096622 Hsf3 protein_coding protein_coding MGP_LPJ_T0096623.1 MGP_LPJ_G0035822.1 mouse_genomes_project X 93676196 93748152 - MGP_LPJ_P0096623 Hsf3 protein_coding protein_coding MGP_LPJ_T0096624.1 MGP_LPJ_G0035822.1 mouse_genomes_project X 93687864 93712952 - Hsf3 protein_coding retained_intron MGP_LPJ_T0016525.1 MGP_LPJ_G0014616.1 mouse_genomes_project X 98505579 98505862 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011192.1 MGP_LPJ_G0009310.1 mouse_genomes_project X 64390066 64390144 - Mir547 miRNA miRNA MGP_LPJ_T0096467.1 MGP_LPJ_G0035774.1 mouse_genomes_project X 75167956 75306433 - MGP_LPJ_P0096467 Prrg1 protein_coding protein_coding MGP_LPJ_T0096468.1 MGP_LPJ_G0035774.1 mouse_genomes_project X 75167956 75306542 - MGP_LPJ_P0096468 Prrg1 protein_coding protein_coding MGP_LPJ_T0096469.1 MGP_LPJ_G0035774.1 mouse_genomes_project X 75167956 75306547 - MGP_LPJ_P0096469 Prrg1 protein_coding protein_coding MGP_LPJ_T0096470.1 MGP_LPJ_G0035774.1 mouse_genomes_project X 75184052 75306506 - Prrg1 protein_coding processed_transcript MGP_LPJ_T0096471.1 MGP_LPJ_G0035774.1 mouse_genomes_project X 75195709 75306433 - Prrg1 protein_coding retained_intron MGP_LPJ_T0096472.1 MGP_LPJ_G0035774.1 mouse_genomes_project X 75195726 75306547 - Prrg1 protein_coding retained_intron MGP_LPJ_T0096473.1 MGP_LPJ_G0035774.1 mouse_genomes_project X 75198802 75306545 - MGP_LPJ_P0096473 Prrg1 protein_coding protein_coding MGP_LPJ_T0096474.1 MGP_LPJ_G0035774.1 mouse_genomes_project X 75237959 75306542 - Prrg1 protein_coding retained_intron MGP_LPJ_T0096475.1 MGP_LPJ_G0035774.1 mouse_genomes_project X 75240992 75306541 - Prrg1 protein_coding retained_intron MGP_LPJ_T0096476.1 MGP_LPJ_G0035774.1 mouse_genomes_project X 75241458 75306503 - Prrg1 protein_coding processed_transcript MGP_LPJ_T0016376.1 MGP_LPJ_G0014467.1 mouse_genomes_project X 69236096 69236432 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101198.1 MGP_LPJ_G0039461.1 mouse_genomes_project X 150374477 150374583 - Gm24460 snoRNA snoRNA MGP_LPJ_T0016167.1 MGP_LPJ_G0014258.1 mouse_genomes_project X 6890336 6890535 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016300.1 MGP_LPJ_G0014391.1 mouse_genomes_project X 53561098 53562274 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095160.1 MGP_LPJ_G0035398.1 mouse_genomes_project X 2193625 2209534 + MGP_LPJ_P0095160 Foxp3 protein_coding protein_coding MGP_LPJ_T0095161.1 MGP_LPJ_G0035398.1 mouse_genomes_project X 2193642 2209525 + MGP_LPJ_P0095161 Foxp3 protein_coding protein_coding MGP_LPJ_T0095162.1 MGP_LPJ_G0035398.1 mouse_genomes_project X 2194432 2209525 + MGP_LPJ_P0095162 Foxp3 protein_coding protein_coding MGP_LPJ_T0095163.1 MGP_LPJ_G0035398.1 mouse_genomes_project X 2200181 2209534 + MGP_LPJ_P0095163 Foxp3 protein_coding protein_coding MGP_LPJ_T0097103.1 MGP_LPJ_G0035969.1 mouse_genomes_project X 132596461 132601044 - MGP_LPJ_P0097103 protein_coding protein_coding MGP_LPJ_T0016459.1 MGP_LPJ_G0014550.1 mouse_genomes_project X 86406990 86407498 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016542.1 MGP_LPJ_G0014633.1 mouse_genomes_project X 100694318 100695008 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096852.1 MGP_LPJ_G0035886.1 mouse_genomes_project X 101381370 101506174 - MGP_LPJ_P0096852 Slc16a2 protein_coding protein_coding MGP_LPJ_T0096853.1 MGP_LPJ_G0035886.1 mouse_genomes_project X 101383824 101390428 - Slc16a2 protein_coding retained_intron MGP_LPJ_T0096854.1 MGP_LPJ_G0035886.1 mouse_genomes_project X 101390357 101418143 - Slc16a2 protein_coding processed_transcript MGP_LPJ_T0096844.1 MGP_LPJ_G0035878.1 mouse_genomes_project X 100491797 100492537 + MGP_LPJ_P0096844 1700011M02Rik protein_coding protein_coding MGP_LPJ_T0016719.1 MGP_LPJ_G0014810.1 mouse_genomes_project X 136066867 136070302 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016414.1 MGP_LPJ_G0014505.1 mouse_genomes_project X 75479024 75480133 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016387.1 MGP_LPJ_G0014478.1 mouse_genomes_project X 71358269 71358653 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097828.1 MGP_LPJ_G0036164.1 mouse_genomes_project X 165780443 165843940 - MGP_LPJ_P0097828 Egfl6 protein_coding protein_coding MGP_LPJ_T0016451.1 MGP_LPJ_G0014542.1 mouse_genomes_project X 85712260 85714705 + processed_pseudogene processed_pseudogene MGP_LPJ_T0018628.1 MGP_LPJ_G0015712.1 mouse_genomes_project X 135122502 135138133 + BC065397 processed_transcript processed_transcript MGP_LPJ_T0018629.1 MGP_LPJ_G0015712.1 mouse_genomes_project X 135122524 135139832 + BC065397 processed_transcript processed_transcript MGP_LPJ_T0018630.1 MGP_LPJ_G0015712.1 mouse_genomes_project X 135122536 135125259 + BC065397 processed_transcript processed_transcript MGP_LPJ_T0018631.1 MGP_LPJ_G0015712.1 mouse_genomes_project X 135122566 135138111 + BC065397 processed_transcript processed_transcript MGP_LPJ_T0018632.1 MGP_LPJ_G0015712.1 mouse_genomes_project X 135123656 135184344 + BC065397 processed_transcript processed_transcript MGP_LPJ_T0018633.1 MGP_LPJ_G0015712.1 mouse_genomes_project X 135124070 135138148 + BC065397 processed_transcript processed_transcript MGP_LPJ_T0018634.1 MGP_LPJ_G0015712.1 mouse_genomes_project X 135145558 135184353 + BC065397 processed_transcript processed_transcript MGP_LPJ_T0016360.1 MGP_LPJ_G0014451.1 mouse_genomes_project X 65192068 65192296 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097297.1 MGP_LPJ_G0036033.1 mouse_genomes_project X 138494886 138538677 - MGP_LPJ_P0097297 Nup62cl protein_coding protein_coding MGP_LPJ_T0097298.1 MGP_LPJ_G0036033.1 mouse_genomes_project X 138509169 138549348 - MGP_LPJ_P0097298 Nup62cl protein_coding protein_coding MGP_LPJ_T0097299.1 MGP_LPJ_G0036033.1 mouse_genomes_project X 138514716 138549767 - MGP_LPJ_P0097299 Nup62cl protein_coding protein_coding MGP_LPJ_T0097300.1 MGP_LPJ_G0036033.1 mouse_genomes_project X 138515316 138549635 - MGP_LPJ_P0097300 Nup62cl protein_coding protein_coding MGP_LPJ_T0097301.1 MGP_LPJ_G0036033.1 mouse_genomes_project X 138521899 138549606 - MGP_LPJ_P0097301 Nup62cl protein_coding protein_coding MGP_LPJ_T0101436.1 MGP_LPJ_G0039602.1 mouse_genomes_project X 58962414 58962650 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0098436.1 MGP_LPJ_G0036717.1 mouse_genomes_project X 113049809 113050190 + Gm27414 scaRNA scaRNA MGP_LPJ_T0009456.1 MGP_LPJ_G0007582.1 mouse_genomes_project X 165917883 165945847 + Gm1720 lincRNA lincRNA MGP_LPJ_T0016683.1 MGP_LPJ_G0014774.1 mouse_genomes_project X 131059708 131060496 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096465.1 MGP_LPJ_G0035772.1 mouse_genomes_project X 74915515 74920990 + MGP_LPJ_P0096465 Obp1b protein_coding protein_coding MGP_LPJ_T0016433.1 MGP_LPJ_G0014524.1 mouse_genomes_project X 82106855 82108222 + processed_pseudogene processed_pseudogene MGP_LPJ_T0018626.1 MGP_LPJ_G0015710.1 mouse_genomes_project X 133669109 133790409 + processed_transcript processed_transcript MGP_LPJ_T0097587.1 MGP_LPJ_G0036100.1 mouse_genomes_project X 152734933 152736219 + MGP_LPJ_P0097587 Spin2c protein_coding protein_coding MGP_LPJ_T0097588.1 MGP_LPJ_G0036100.1 mouse_genomes_project X 152734949 152736232 + MGP_LPJ_P0097588 Spin2c protein_coding protein_coding MGP_LPJ_T0097589.1 MGP_LPJ_G0036100.1 mouse_genomes_project X 152735001 152736952 + MGP_LPJ_P0097589 Spin2c protein_coding protein_coding MGP_LPJ_T0097760.1 MGP_LPJ_G0036145.1 mouse_genomes_project X 163283037 163288445 - MGP_LPJ_P0097760 Siah1b protein_coding protein_coding MGP_LPJ_T0097761.1 MGP_LPJ_G0036145.1 mouse_genomes_project X 163283037 163288474 - MGP_LPJ_P0097761 Siah1b protein_coding protein_coding MGP_LPJ_T0097762.1 MGP_LPJ_G0036145.1 mouse_genomes_project X 163283528 163288817 - MGP_LPJ_P0097762 Siah1b protein_coding protein_coding MGP_LPJ_T0096840.1 MGP_LPJ_G0035877.1 mouse_genomes_project X 100485506 100491565 - MGP_LPJ_P0096840 Dmrtc1a protein_coding protein_coding MGP_LPJ_T0096841.1 MGP_LPJ_G0035877.1 mouse_genomes_project X 100485512 100488846 - MGP_LPJ_P0096841 Dmrtc1a protein_coding protein_coding MGP_LPJ_T0096842.1 MGP_LPJ_G0035877.1 mouse_genomes_project X 100485512 100488757 - MGP_LPJ_P0096842 Dmrtc1a protein_coding protein_coding MGP_LPJ_T0096843.1 MGP_LPJ_G0035877.1 mouse_genomes_project X 100485512 100491580 - MGP_LPJ_P0096843 Dmrtc1a protein_coding protein_coding MGP_LPJ_T0011784.1 MGP_LPJ_G0009902.1 mouse_genomes_project X 101306906 101307111 + Gm27321 misc_RNA misc_RNA MGP_LPJ_T0098437.1 MGP_LPJ_G0036718.1 mouse_genomes_project X 119108226 119108350 - Gm25825 scaRNA scaRNA MGP_LPJ_T0016332.1 MGP_LPJ_G0014423.1 mouse_genomes_project X 58235111 58235613 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101428.1 MGP_LPJ_G0039597.1 mouse_genomes_project X 10236493 10237375 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101429.1 MGP_LPJ_G0039597.1 mouse_genomes_project X 10236740 10237289 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0016784.1 MGP_LPJ_G0014875.1 mouse_genomes_project X 149493622 149494217 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096508.1 MGP_LPJ_G0035784.1 mouse_genomes_project X 82574751 82650244 - MGP_LPJ_P0096508 Gk protein_coding protein_coding MGP_LPJ_T0096509.1 MGP_LPJ_G0035784.1 mouse_genomes_project X 82574751 82650231 - MGP_LPJ_P0096509 Gk protein_coding protein_coding MGP_LPJ_T0096510.1 MGP_LPJ_G0035784.1 mouse_genomes_project X 82574751 82650426 - MGP_LPJ_P0096510 Gk protein_coding protein_coding MGP_LPJ_T0096511.1 MGP_LPJ_G0035784.1 mouse_genomes_project X 82574751 82650260 - MGP_LPJ_P0096511 Gk protein_coding protein_coding MGP_LPJ_T0096512.1 MGP_LPJ_G0035784.1 mouse_genomes_project X 82579810 82585307 - Gk protein_coding processed_transcript MGP_LPJ_T0096513.1 MGP_LPJ_G0035784.1 mouse_genomes_project X 82585226 82587290 - Gk protein_coding retained_intron MGP_LPJ_T0096514.1 MGP_LPJ_G0035784.1 mouse_genomes_project X 82585523 82610442 - Gk protein_coding retained_intron MGP_LPJ_T0096515.1 MGP_LPJ_G0035784.1 mouse_genomes_project X 82632145 82635606 - Gk protein_coding retained_intron MGP_LPJ_T0097392.1 MGP_LPJ_G0036062.1 mouse_genomes_project X 143206308 143632510 + MGP_LPJ_P0097392 Zcchc16 protein_coding protein_coding MGP_LPJ_T0097393.1 MGP_LPJ_G0036062.1 mouse_genomes_project X 143629599 143631357 + MGP_LPJ_P0097393 Zcchc16 protein_coding protein_coding MGP_LPJ_T0096137.1 MGP_LPJ_G0035711.1 mouse_genomes_project X 70414390 70430519 - MGP_LPJ_P0096137 L1cam protein_coding protein_coding MGP_LPJ_T0096138.1 MGP_LPJ_G0035711.1 mouse_genomes_project X 70414567 70443151 - MGP_LPJ_P0096138 L1cam protein_coding protein_coding MGP_LPJ_T0096139.1 MGP_LPJ_G0035711.1 mouse_genomes_project X 70415293 70430418 - MGP_LPJ_P0096139 L1cam protein_coding protein_coding MGP_LPJ_T0096140.1 MGP_LPJ_G0035711.1 mouse_genomes_project X 70415520 70417016 - L1cam protein_coding retained_intron MGP_LPJ_T0096141.1 MGP_LPJ_G0035711.1 mouse_genomes_project X 70415626 70417384 - MGP_LPJ_P0096141 L1cam protein_coding protein_coding MGP_LPJ_T0096142.1 MGP_LPJ_G0035711.1 mouse_genomes_project X 70417046 70418286 - L1cam protein_coding retained_intron MGP_LPJ_T0096143.1 MGP_LPJ_G0035711.1 mouse_genomes_project X 70417300 70418036 - L1cam protein_coding retained_intron MGP_LPJ_T0096144.1 MGP_LPJ_G0035711.1 mouse_genomes_project X 70418103 70419255 - L1cam protein_coding retained_intron MGP_LPJ_T0096145.1 MGP_LPJ_G0035711.1 mouse_genomes_project X 70419694 70420777 - L1cam protein_coding retained_intron MGP_LPJ_T0096146.1 MGP_LPJ_G0035711.1 mouse_genomes_project X 70420047 70421745 - MGP_LPJ_P0096146 L1cam protein_coding protein_coding MGP_LPJ_T0096147.1 MGP_LPJ_G0035711.1 mouse_genomes_project X 70424334 70443112 - L1cam protein_coding retained_intron MGP_LPJ_T0096148.1 MGP_LPJ_G0035711.1 mouse_genomes_project X 70426300 70458690 - L1cam protein_coding processed_transcript MGP_LPJ_T0096149.1 MGP_LPJ_G0035711.1 mouse_genomes_project X 70426377 70430894 - MGP_LPJ_P0096149 L1cam protein_coding protein_coding MGP_LPJ_T0097088.1 MGP_LPJ_G0035966.1 mouse_genomes_project X 132352908 132411310 + MGP_LPJ_P0097088 Cenpi protein_coding protein_coding MGP_LPJ_T0097089.1 MGP_LPJ_G0035966.1 mouse_genomes_project X 132352979 132411307 + MGP_LPJ_P0097089 Cenpi protein_coding protein_coding MGP_LPJ_T0097090.1 MGP_LPJ_G0035966.1 mouse_genomes_project X 132353023 132355075 + MGP_LPJ_P0097090 Cenpi protein_coding protein_coding MGP_LPJ_T0097091.1 MGP_LPJ_G0035966.1 mouse_genomes_project X 132357582 132390977 + Cenpi protein_coding processed_transcript MGP_LPJ_T0097092.1 MGP_LPJ_G0035966.1 mouse_genomes_project X 132392646 132411308 + Cenpi protein_coding processed_transcript MGP_LPJ_T0095656.1 MGP_LPJ_G0035556.1 mouse_genomes_project X 33972174 33983196 + Mcts1 protein_coding processed_transcript MGP_LPJ_T0095657.1 MGP_LPJ_G0035556.1 mouse_genomes_project X 33972251 33984791 + MGP_LPJ_P0095657 Mcts1 protein_coding protein_coding MGP_LPJ_T0095658.1 MGP_LPJ_G0035556.1 mouse_genomes_project X 33972895 33977758 + Mcts1 protein_coding processed_transcript MGP_LPJ_T0095659.1 MGP_LPJ_G0035556.1 mouse_genomes_project X 33980068 33984791 + Mcts1 protein_coding processed_transcript MGP_LPJ_T0095660.1 MGP_LPJ_G0035556.1 mouse_genomes_project X 33981148 33984765 + Mcts1 protein_coding processed_transcript MGP_LPJ_T0005630.1 MGP_LPJ_G0004746.1 mouse_genomes_project X 142964539 142987009 + antisense antisense MGP_LPJ_T0005631.1 MGP_LPJ_G0004746.1 mouse_genomes_project X 142980685 142987006 + antisense antisense MGP_LPJ_T0016803.1 MGP_LPJ_G0014894.1 mouse_genomes_project X 153131476 153132075 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016820.1 MGP_LPJ_G0014911.1 mouse_genomes_project X 156597426 156598123 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097476.1 MGP_LPJ_G0036075.1 mouse_genomes_project X 149859673 149903854 + MGP_LPJ_P0097476 Fgd1 protein_coding protein_coding MGP_LPJ_T0097477.1 MGP_LPJ_G0036075.1 mouse_genomes_project X 149860693 149903854 + MGP_LPJ_P0097477 Fgd1 protein_coding protein_coding MGP_LPJ_T0097478.1 MGP_LPJ_G0036075.1 mouse_genomes_project X 149881007 149883293 + Fgd1 protein_coding retained_intron MGP_LPJ_T0097479.1 MGP_LPJ_G0036075.1 mouse_genomes_project X 149900442 149901514 + Fgd1 protein_coding retained_intron MGP_LPJ_T0009458.1 MGP_LPJ_G0007584.1 mouse_genomes_project X 166313976 166321155 - Gm8817 lincRNA lincRNA MGP_LPJ_T0009459.1 MGP_LPJ_G0007584.1 mouse_genomes_project X 166314118 166321155 - Gm8817 lincRNA lincRNA MGP_LPJ_T0009460.1 MGP_LPJ_G0007584.1 mouse_genomes_project X 166314334 166319164 - Gm8817 lincRNA lincRNA MGP_LPJ_T0101455.1 MGP_LPJ_G0039614.1 mouse_genomes_project X 168661801 168663520 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0016567.1 MGP_LPJ_G0014658.1 mouse_genomes_project X 102734293 102735074 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101199.1 MGP_LPJ_G0039462.1 mouse_genomes_project X 154123787 154123919 + Gm25429 snoRNA snoRNA MGP_LPJ_T0095966.1 MGP_LPJ_G0035659.1 mouse_genomes_project X 64324855 64326442 - MGP_LPJ_P0095966 4933436I01Rik protein_coding protein_coding MGP_LPJ_T0097041.1 MGP_LPJ_G0035951.1 mouse_genomes_project X 125248783 125250389 + MGP_LPJ_P0097041 4921511C20Rik protein_coding protein_coding MGP_LPJ_T0096992.1 MGP_LPJ_G0035930.1 mouse_genomes_project X 109930112 110015245 + MGP_LPJ_P0096992 Apool protein_coding protein_coding MGP_LPJ_T0096993.1 MGP_LPJ_G0035930.1 mouse_genomes_project X 109930126 109983941 + Apool protein_coding retained_intron MGP_LPJ_T0096994.1 MGP_LPJ_G0035930.1 mouse_genomes_project X 109930144 110014920 + MGP_LPJ_P0096994 Apool protein_coding protein_coding MGP_LPJ_T0011779.1 MGP_LPJ_G0009897.1 mouse_genomes_project X 101146816 101146897 + Gm27520 misc_RNA misc_RNA MGP_LPJ_T0098356.1 MGP_LPJ_G0036637.1 mouse_genomes_project X 150613993 150614112 + n-R5s13 rRNA rRNA MGP_LPJ_T0016532.1 MGP_LPJ_G0014623.1 mouse_genomes_project X 99284892 99285773 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016679.1 MGP_LPJ_G0014770.1 mouse_genomes_project X 129813484 129815480 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016208.1 MGP_LPJ_G0014299.1 mouse_genomes_project X 16698810 16700392 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095620.1 MGP_LPJ_G0035540.1 mouse_genomes_project X 33036744 33048534 - MGP_LPJ_P0095620 protein_coding protein_coding MGP_LPJ_T0095621.1 MGP_LPJ_G0035540.1 mouse_genomes_project X 33036744 33040742 - MGP_LPJ_P0095621 protein_coding protein_coding MGP_LPJ_T0097503.1 MGP_LPJ_G0036080.1 mouse_genomes_project X 150637074 150638516 + Huwe1 protein_coding processed_transcript MGP_LPJ_T0097504.1 MGP_LPJ_G0036080.1 mouse_genomes_project X 150637135 150640764 + Huwe1 protein_coding processed_transcript MGP_LPJ_T0097505.1 MGP_LPJ_G0036080.1 mouse_genomes_project X 150637566 150643113 + Huwe1 protein_coding processed_transcript MGP_LPJ_T0097506.1 MGP_LPJ_G0036080.1 mouse_genomes_project X 150639495 150711292 + MGP_LPJ_P0097506 Huwe1 protein_coding nonsense_mediated_decay MGP_LPJ_T0097507.1 MGP_LPJ_G0036080.1 mouse_genomes_project X 150639513 150643113 + Huwe1 protein_coding processed_transcript MGP_LPJ_T0097508.1 MGP_LPJ_G0036080.1 mouse_genomes_project X 150639579 150691546 + Huwe1 protein_coding retained_intron MGP_LPJ_T0097509.1 MGP_LPJ_G0036080.1 mouse_genomes_project X 150639579 150774433 + MGP_LPJ_P0097509 Huwe1 protein_coding protein_coding MGP_LPJ_T0097510.1 MGP_LPJ_G0036080.1 mouse_genomes_project X 150639589 150773399 + MGP_LPJ_P0097510 Huwe1 protein_coding unknown_likely_coding MGP_LPJ_T0097511.1 MGP_LPJ_G0036080.1 mouse_genomes_project X 150639599 150698891 + Huwe1 protein_coding retained_intron MGP_LPJ_T0097512.1 MGP_LPJ_G0036080.1 mouse_genomes_project X 150639599 150711807 + Huwe1 protein_coding retained_intron MGP_LPJ_T0097513.1 MGP_LPJ_G0036080.1 mouse_genomes_project X 150639910 150673621 + MGP_LPJ_P0097513 Huwe1 protein_coding protein_coding MGP_LPJ_T0097514.1 MGP_LPJ_G0036080.1 mouse_genomes_project X 150639914 150685934 + Huwe1 protein_coding processed_transcript MGP_LPJ_T0097515.1 MGP_LPJ_G0036080.1 mouse_genomes_project X 150639914 150710485 + Huwe1 protein_coding retained_intron MGP_LPJ_T0097516.1 MGP_LPJ_G0036080.1 mouse_genomes_project X 150639914 150678453 + MGP_LPJ_P0097516 Huwe1 protein_coding nonsense_mediated_decay MGP_LPJ_T0097517.1 MGP_LPJ_G0036080.1 mouse_genomes_project X 150673592 150774433 + MGP_LPJ_P0097517 Huwe1 protein_coding protein_coding MGP_LPJ_T0097518.1 MGP_LPJ_G0036080.1 mouse_genomes_project X 150698511 150729455 + MGP_LPJ_P0097518 Huwe1 protein_coding nonsense_mediated_decay MGP_LPJ_T0097519.1 MGP_LPJ_G0036080.1 mouse_genomes_project X 150702842 150712161 + MGP_LPJ_P0097519 Huwe1 protein_coding nonsense_mediated_decay MGP_LPJ_T0097520.1 MGP_LPJ_G0036080.1 mouse_genomes_project X 150720844 150721559 + Huwe1 protein_coding processed_transcript MGP_LPJ_T0097521.1 MGP_LPJ_G0036080.1 mouse_genomes_project X 150744243 150749167 + Huwe1 protein_coding retained_intron MGP_LPJ_T0097522.1 MGP_LPJ_G0036080.1 mouse_genomes_project X 150748094 150749639 + Huwe1 protein_coding retained_intron MGP_LPJ_T0097523.1 MGP_LPJ_G0036080.1 mouse_genomes_project X 150748094 150749442 + Huwe1 protein_coding retained_intron MGP_LPJ_T0097524.1 MGP_LPJ_G0036080.1 mouse_genomes_project X 150760524 150761855 + Huwe1 protein_coding retained_intron MGP_LPJ_T0097525.1 MGP_LPJ_G0036080.1 mouse_genomes_project X 150760585 150762976 + Huwe1 protein_coding retained_intron MGP_LPJ_T0097526.1 MGP_LPJ_G0036080.1 mouse_genomes_project X 150763500 150766902 + Huwe1 protein_coding retained_intron MGP_LPJ_T0016850.1 MGP_LPJ_G0014941.1 mouse_genomes_project X 161981196 162031598 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102527.1 MGP_LPJ_G0040563.1 mouse_genomes_project X 153144947 153147217 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0099919.1 MGP_LPJ_G0038182.1 mouse_genomes_project X 104427966 104428073 - Gm24491 snRNA snRNA MGP_LPJ_T0096047.1 MGP_LPJ_G0035683.1 mouse_genomes_project X 68914197 68919186 - MGP_LPJ_P0096047 Magea10 protein_coding protein_coding MGP_LPJ_T0096558.1 MGP_LPJ_G0035806.1 mouse_genomes_project X 91377125 91402217 - MGP_LPJ_P0096558 Eif2s3x protein_coding protein_coding MGP_LPJ_T0096559.1 MGP_LPJ_G0035806.1 mouse_genomes_project X 91388096 91402159 - MGP_LPJ_P0096559 Eif2s3x protein_coding protein_coding MGP_LPJ_T0096560.1 MGP_LPJ_G0035806.1 mouse_genomes_project X 91391338 91402370 - Eif2s3x protein_coding processed_transcript MGP_LPJ_T0101166.1 MGP_LPJ_G0039429.1 mouse_genomes_project X 71743592 71743710 + Gm25520 snoRNA snoRNA MGP_LPJ_T0096625.1 MGP_LPJ_G0035823.1 mouse_genomes_project X 93827002 93942890 + MGP_LPJ_P0096625 Heph protein_coding protein_coding MGP_LPJ_T0096626.1 MGP_LPJ_G0035823.1 mouse_genomes_project X 93828016 93913828 + MGP_LPJ_P0096626 Heph protein_coding protein_coding MGP_LPJ_T0096627.1 MGP_LPJ_G0035823.1 mouse_genomes_project X 93828033 93942887 + MGP_LPJ_P0096627 Heph protein_coding protein_coding MGP_LPJ_T0096628.1 MGP_LPJ_G0035823.1 mouse_genomes_project X 93828071 93862979 + Heph protein_coding retained_intron MGP_LPJ_T0096629.1 MGP_LPJ_G0035823.1 mouse_genomes_project X 93828071 93873386 + Heph protein_coding retained_intron MGP_LPJ_T0097583.1 MGP_LPJ_G0036099.1 mouse_genomes_project X 152630410 152649350 + MGP_LPJ_P0097583 2210013O21Rik protein_coding protein_coding MGP_LPJ_T0097584.1 MGP_LPJ_G0036099.1 mouse_genomes_project X 152630430 152650006 + MGP_LPJ_P0097584 2210013O21Rik protein_coding protein_coding MGP_LPJ_T0097585.1 MGP_LPJ_G0036099.1 mouse_genomes_project X 152630447 152636009 + MGP_LPJ_P0097585 2210013O21Rik protein_coding protein_coding MGP_LPJ_T0097586.1 MGP_LPJ_G0036099.1 mouse_genomes_project X 152630759 152649208 + 2210013O21Rik protein_coding processed_transcript MGP_LPJ_T0016242.1 MGP_LPJ_G0014333.1 mouse_genomes_project X 36075683 36075962 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095378.1 MGP_LPJ_G0035455.1 mouse_genomes_project X 5440103 5548933 + Tspan7 protein_coding retained_intron MGP_LPJ_T0095379.1 MGP_LPJ_G0035455.1 mouse_genomes_project X 5440103 5548933 + MGP_LPJ_P0095379 Tspan7 protein_coding protein_coding MGP_LPJ_T0095380.1 MGP_LPJ_G0035455.1 mouse_genomes_project X 5440103 5548933 + MGP_LPJ_P0095380 Tspan7 protein_coding protein_coding MGP_LPJ_T0095339.1 MGP_LPJ_G0035435.1 mouse_genomes_project X 3259140 3306314 - MGP_LPJ_P0095339 protein_coding protein_coding MGP_LPJ_T0016799.1 MGP_LPJ_G0014890.1 mouse_genomes_project X 152295309 152296290 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016700.1 MGP_LPJ_G0014791.1 mouse_genomes_project X 134270391 134271111 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097039.1 MGP_LPJ_G0035949.1 mouse_genomes_project X 124682001 124685390 - MGP_LPJ_P0097039 4932411N23Rik protein_coding protein_coding MGP_LPJ_T0095961.1 MGP_LPJ_G0035655.1 mouse_genomes_project X 61309764 61311135 + MGP_LPJ_P0095961 Ctag2 protein_coding protein_coding MGP_LPJ_T0095579.1 MGP_LPJ_G0035518.1 mouse_genomes_project X 32202400 32279407 - MGP_LPJ_P0095579 Sept6 protein_coding protein_coding MGP_LPJ_T0095580.1 MGP_LPJ_G0035518.1 mouse_genomes_project X 32204520 32279407 - MGP_LPJ_P0095580 Sept6 protein_coding protein_coding MGP_LPJ_T0095581.1 MGP_LPJ_G0035518.1 mouse_genomes_project X 32206105 32279407 - MGP_LPJ_P0095581 Sept6 protein_coding protein_coding MGP_LPJ_T0095582.1 MGP_LPJ_G0035518.1 mouse_genomes_project X 32256354 32282091 - MGP_LPJ_P0095582 Sept6 protein_coding protein_coding MGP_LPJ_T0095583.1 MGP_LPJ_G0035518.1 mouse_genomes_project X 32261660 32279242 - Sept6 protein_coding retained_intron MGP_LPJ_T0096634.1 MGP_LPJ_G0035825.1 mouse_genomes_project X 94447891 94457400 + MGP_LPJ_P0096634 Pgr15l protein_coding protein_coding MGP_LPJ_T0096523.1 MGP_LPJ_G0035790.1 mouse_genomes_project X 86384786 86397178 - MGP_LPJ_P0096523 Pet2 protein_coding protein_coding MGP_LPJ_T0096524.1 MGP_LPJ_G0035790.1 mouse_genomes_project X 86384786 86397178 - MGP_LPJ_P0096524 Pet2 protein_coding protein_coding MGP_LPJ_T0095929.1 MGP_LPJ_G0035642.1 mouse_genomes_project X 55014191 55089480 - MGP_LPJ_P0095929 Fgf13 protein_coding protein_coding MGP_LPJ_T0095930.1 MGP_LPJ_G0035642.1 mouse_genomes_project X 55014191 55517281 - MGP_LPJ_P0095930 Fgf13 protein_coding protein_coding MGP_LPJ_T0095931.1 MGP_LPJ_G0035642.1 mouse_genomes_project X 55014191 55121197 - MGP_LPJ_P0095931 Fgf13 protein_coding protein_coding MGP_LPJ_T0095932.1 MGP_LPJ_G0035642.1 mouse_genomes_project X 55015524 55088259 - Fgf13 protein_coding processed_transcript MGP_LPJ_T0095933.1 MGP_LPJ_G0035642.1 mouse_genomes_project X 55087009 55088207 - Fgf13 protein_coding processed_transcript MGP_LPJ_T0095934.1 MGP_LPJ_G0035642.1 mouse_genomes_project X 55087012 55516682 - MGP_LPJ_P0095934 Fgf13 protein_coding protein_coding MGP_LPJ_T0095935.1 MGP_LPJ_G0035642.1 mouse_genomes_project X 55208577 55517281 - MGP_LPJ_P0095935 Fgf13 protein_coding protein_coding MGP_LPJ_T0095936.1 MGP_LPJ_G0035642.1 mouse_genomes_project X 55208654 55517031 - MGP_LPJ_P0095936 Fgf13 protein_coding protein_coding MGP_LPJ_T0095937.1 MGP_LPJ_G0035642.1 mouse_genomes_project X 55516023 55517258 - Fgf13 protein_coding retained_intron MGP_LPJ_T0016557.1 MGP_LPJ_G0014648.1 mouse_genomes_project X 101360987 101361306 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095997.1 MGP_LPJ_G0035670.1 mouse_genomes_project X 67510821 67620410 + MGP_LPJ_P0095997 Mamld1 protein_coding protein_coding MGP_LPJ_T0095998.1 MGP_LPJ_G0035670.1 mouse_genomes_project X 67510821 67621749 + MGP_LPJ_P0095998 Mamld1 protein_coding protein_coding MGP_LPJ_T0101183.1 MGP_LPJ_G0039446.1 mouse_genomes_project X 124750617 124750740 + Gm23586 snoRNA snoRNA MGP_LPJ_T0016810.1 MGP_LPJ_G0014901.1 mouse_genomes_project X 154473485 154474055 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099913.1 MGP_LPJ_G0038176.1 mouse_genomes_project X 99403015 99403110 - Gm25828 snRNA snRNA MGP_LPJ_T0099941.1 MGP_LPJ_G0038204.1 mouse_genomes_project X 152842467 152842567 - Gm25895 snRNA snRNA MGP_LPJ_T0101154.1 MGP_LPJ_G0039417.1 mouse_genomes_project X 38067000 38067130 - Gm23705 snoRNA snoRNA MGP_LPJ_T0102496.1 MGP_LPJ_G0040532.1 mouse_genomes_project X 71577411 71577549 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0016491.1 MGP_LPJ_G0014582.1 mouse_genomes_project X 91778153 91778760 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018597.1 MGP_LPJ_G0015705.1 mouse_genomes_project X 102738904 102776557 - 5530601H04Rik processed_transcript processed_transcript MGP_LPJ_T0018598.1 MGP_LPJ_G0015705.1 mouse_genomes_project X 102740515 102776507 - 5530601H04Rik processed_transcript processed_transcript MGP_LPJ_T0018599.1 MGP_LPJ_G0015705.1 mouse_genomes_project X 102740524 102776503 - 5530601H04Rik processed_transcript processed_transcript MGP_LPJ_T0018600.1 MGP_LPJ_G0015705.1 mouse_genomes_project X 102742541 102776585 - 5530601H04Rik processed_transcript processed_transcript MGP_LPJ_T0018601.1 MGP_LPJ_G0015705.1 mouse_genomes_project X 102743088 102776585 - 5530601H04Rik processed_transcript processed_transcript MGP_LPJ_T0018602.1 MGP_LPJ_G0015705.1 mouse_genomes_project X 102744346 102776548 - 5530601H04Rik processed_transcript processed_transcript MGP_LPJ_T0018603.1 MGP_LPJ_G0015705.1 mouse_genomes_project X 102744958 102776504 - 5530601H04Rik processed_transcript processed_transcript MGP_LPJ_T0018604.1 MGP_LPJ_G0015705.1 mouse_genomes_project X 102745490 102776516 - 5530601H04Rik processed_transcript processed_transcript MGP_LPJ_T0018605.1 MGP_LPJ_G0015705.1 mouse_genomes_project X 102745688 102776496 - 5530601H04Rik processed_transcript processed_transcript MGP_LPJ_T0018606.1 MGP_LPJ_G0015705.1 mouse_genomes_project X 102745763 102776569 - 5530601H04Rik processed_transcript processed_transcript MGP_LPJ_T0018607.1 MGP_LPJ_G0015705.1 mouse_genomes_project X 102769306 102776565 - 5530601H04Rik processed_transcript processed_transcript MGP_LPJ_T0018608.1 MGP_LPJ_G0015705.1 mouse_genomes_project X 102774325 102776555 - 5530601H04Rik processed_transcript retained_intron MGP_LPJ_T0018609.1 MGP_LPJ_G0015705.1 mouse_genomes_project X 102775572 102786972 - 5530601H04Rik processed_transcript processed_transcript MGP_LPJ_T0018610.1 MGP_LPJ_G0015705.1 mouse_genomes_project X 102782600 102783366 - 5530601H04Rik processed_transcript processed_transcript MGP_LPJ_T0018611.1 MGP_LPJ_G0015705.1 mouse_genomes_project X 102782820 102787168 - 5530601H04Rik processed_transcript processed_transcript MGP_LPJ_T0018612.1 MGP_LPJ_G0015705.1 mouse_genomes_project X 102784833 102786996 - 5530601H04Rik processed_transcript processed_transcript MGP_LPJ_T0097182.1 MGP_LPJ_G0035994.1 mouse_genomes_project X 134275070 134276175 + MGP_LPJ_P0097182 protein_coding protein_coding MGP_LPJ_T0016453.1 MGP_LPJ_G0014544.1 mouse_genomes_project X 85735396 85736518 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011232.1 MGP_LPJ_G0009350.1 mouse_genomes_project X 145504628 145504733 + Gm22650 miRNA miRNA MGP_LPJ_T0102476.1 MGP_LPJ_G0040512.1 mouse_genomes_project X 3259727 3425419 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0096109.1 MGP_LPJ_G0035706.1 mouse_genomes_project X 70313873 70330379 + Plxnb3 protein_coding retained_intron MGP_LPJ_T0096110.1 MGP_LPJ_G0035706.1 mouse_genomes_project X 70313873 70330379 + Plxnb3 protein_coding retained_intron MGP_LPJ_T0096111.1 MGP_LPJ_G0035706.1 mouse_genomes_project X 70313873 70330379 + Plxnb3 protein_coding retained_intron MGP_LPJ_T0096112.1 MGP_LPJ_G0035706.1 mouse_genomes_project X 70313882 70330379 + MGP_LPJ_P0096112 Plxnb3 protein_coding protein_coding MGP_LPJ_T0096113.1 MGP_LPJ_G0035706.1 mouse_genomes_project X 70323396 70327530 + Plxnb3 protein_coding retained_intron MGP_LPJ_T0011215.1 MGP_LPJ_G0009333.1 mouse_genomes_project X 101254491 101254540 + Mir374c miRNA miRNA MGP_LPJ_T0011155.1 MGP_LPJ_G0009273.1 mouse_genomes_project X 47952366 47952475 - Mir717 miRNA miRNA MGP_LPJ_T0005602.1 MGP_LPJ_G0004721.1 mouse_genomes_project X 32087132 32089521 + Gm14549 antisense antisense MGP_LPJ_T0016496.1 MGP_LPJ_G0014587.1 mouse_genomes_project X 92025684 92027100 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101176.1 MGP_LPJ_G0039439.1 mouse_genomes_project X 101758321 101758459 - Gm22266 snoRNA snoRNA MGP_LPJ_T0016203.1 MGP_LPJ_G0014294.1 mouse_genomes_project X 15575362 15575558 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095909.1 MGP_LPJ_G0035636.1 mouse_genomes_project X 53141630 53151019 - Arhgef6 protein_coding retained_intron MGP_LPJ_T0095910.1 MGP_LPJ_G0035636.1 mouse_genomes_project X 53141630 53251249 - MGP_LPJ_P0095910 Arhgef6 protein_coding protein_coding MGP_LPJ_T0095911.1 MGP_LPJ_G0035636.1 mouse_genomes_project X 53143585 53194148 - MGP_LPJ_P0095911 Arhgef6 protein_coding protein_coding MGP_LPJ_T0095912.1 MGP_LPJ_G0035636.1 mouse_genomes_project X 53149359 53162620 - MGP_LPJ_P0095912 Arhgef6 protein_coding protein_coding MGP_LPJ_T0095913.1 MGP_LPJ_G0035636.1 mouse_genomes_project X 53160259 53239115 - MGP_LPJ_P0095913 Arhgef6 protein_coding protein_coding MGP_LPJ_T0095914.1 MGP_LPJ_G0035636.1 mouse_genomes_project X 53184376 53239117 - Arhgef6 protein_coding retained_intron MGP_LPJ_T0095915.1 MGP_LPJ_G0035636.1 mouse_genomes_project X 53211046 53213379 - Arhgef6 protein_coding processed_transcript MGP_LPJ_T0095916.1 MGP_LPJ_G0035636.1 mouse_genomes_project X 53248423 53251026 - Arhgef6 protein_coding retained_intron MGP_LPJ_T0011164.1 MGP_LPJ_G0009282.1 mouse_genomes_project X 48618203 48618272 - Mir450-2 miRNA miRNA MGP_LPJ_T0097040.1 MGP_LPJ_G0035950.1 mouse_genomes_project X 124892448 124915554 + MGP_LPJ_P0097040 Gm382 protein_coding protein_coding MGP_LPJ_T0011214.1 MGP_LPJ_G0009332.1 mouse_genomes_project X 101254466 101254561 - Mir374b miRNA miRNA MGP_LPJ_T0016561.1 MGP_LPJ_G0014652.1 mouse_genomes_project X 101571677 101572691 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016714.1 MGP_LPJ_G0014805.1 mouse_genomes_project X 135531149 135531918 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099940.1 MGP_LPJ_G0038203.1 mouse_genomes_project X 152485308 152485415 - Gm25793 snRNA snRNA MGP_LPJ_T0097022.1 MGP_LPJ_G0035941.1 mouse_genomes_project X 114405786 114406134 + MGP_LPJ_P0097022 H2afb2 protein_coding protein_coding MGP_LPJ_T0095757.1 MGP_LPJ_G0035580.1 mouse_genomes_project X 43845724 43913923 + MGP_LPJ_P0095757 Bcorl1 protein_coding protein_coding MGP_LPJ_T0095758.1 MGP_LPJ_G0035580.1 mouse_genomes_project X 43846415 43867544 + Bcorl1 protein_coding processed_transcript MGP_LPJ_T0095759.1 MGP_LPJ_G0035580.1 mouse_genomes_project X 43848125 43913923 + MGP_LPJ_P0095759 Bcorl1 protein_coding protein_coding MGP_LPJ_T0095760.1 MGP_LPJ_G0035580.1 mouse_genomes_project X 43866285 43912047 + MGP_LPJ_P0095760 Bcorl1 protein_coding protein_coding MGP_LPJ_T0095761.1 MGP_LPJ_G0035580.1 mouse_genomes_project X 43866657 43884169 + MGP_LPJ_P0095761 Bcorl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0095762.1 MGP_LPJ_G0035580.1 mouse_genomes_project X 43874376 43888994 + MGP_LPJ_P0095762 Bcorl1 protein_coding protein_coding MGP_LPJ_T0016380.1 MGP_LPJ_G0014471.1 mouse_genomes_project X 71090035 71090868 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102498.1 MGP_LPJ_G0040534.1 mouse_genomes_project X 73074516 73075476 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0097079.1 MGP_LPJ_G0035962.1 mouse_genomes_project X 132181702 132194490 - MGP_LPJ_P0097079 Xkrx protein_coding protein_coding MGP_LPJ_T0097080.1 MGP_LPJ_G0035962.1 mouse_genomes_project X 132183691 132194638 - Xkrx protein_coding processed_transcript MGP_LPJ_T0011134.1 MGP_LPJ_G0009252.1 mouse_genomes_project X 1837605 1837714 - Mir501 miRNA miRNA MGP_LPJ_T0095363.1 MGP_LPJ_G0035451.1 mouse_genomes_project X 4817527 4922556 + MGP_LPJ_P0095363 Sytl5 protein_coding protein_coding MGP_LPJ_T0095364.1 MGP_LPJ_G0035451.1 mouse_genomes_project X 4817527 4922556 + MGP_LPJ_P0095364 Sytl5 protein_coding protein_coding MGP_LPJ_T0095675.1 MGP_LPJ_G0035562.1 mouse_genomes_project X 37166981 37283929 - MGP_LPJ_P0095675 Thoc2 protein_coding protein_coding MGP_LPJ_T0095676.1 MGP_LPJ_G0035562.1 mouse_genomes_project X 37166981 37186436 - MGP_LPJ_P0095676 Thoc2 protein_coding protein_coding MGP_LPJ_T0095677.1 MGP_LPJ_G0035562.1 mouse_genomes_project X 37169098 37186810 - MGP_LPJ_P0095677 Thoc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0095678.1 MGP_LPJ_G0035562.1 mouse_genomes_project X 37169472 37178740 - MGP_LPJ_P0095678 Thoc2 protein_coding protein_coding MGP_LPJ_T0095679.1 MGP_LPJ_G0035562.1 mouse_genomes_project X 37174344 37179228 - MGP_LPJ_P0095679 Thoc2 protein_coding protein_coding MGP_LPJ_T0095680.1 MGP_LPJ_G0035562.1 mouse_genomes_project X 37174356 37178892 - MGP_LPJ_P0095680 Thoc2 protein_coding protein_coding MGP_LPJ_T0095681.1 MGP_LPJ_G0035562.1 mouse_genomes_project X 37175528 37185905 - Thoc2 protein_coding processed_transcript MGP_LPJ_T0095682.1 MGP_LPJ_G0035562.1 mouse_genomes_project X 37184053 37186512 - Thoc2 protein_coding retained_intron MGP_LPJ_T0095683.1 MGP_LPJ_G0035562.1 mouse_genomes_project X 37186387 37232962 - Thoc2 protein_coding processed_transcript MGP_LPJ_T0095684.1 MGP_LPJ_G0035562.1 mouse_genomes_project X 37186783 37203522 - Thoc2 protein_coding retained_intron MGP_LPJ_T0095685.1 MGP_LPJ_G0035562.1 mouse_genomes_project X 37196023 37203664 - Thoc2 protein_coding retained_intron MGP_LPJ_T0095686.1 MGP_LPJ_G0035562.1 mouse_genomes_project X 37230573 37283929 - Thoc2 protein_coding retained_intron MGP_LPJ_T0095687.1 MGP_LPJ_G0035562.1 mouse_genomes_project X 37234132 37283914 - MGP_LPJ_P0095687 Thoc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0095688.1 MGP_LPJ_G0035562.1 mouse_genomes_project X 37248606 37292845 - MGP_LPJ_P0095688 Thoc2 protein_coding protein_coding MGP_LPJ_T0095689.1 MGP_LPJ_G0035562.1 mouse_genomes_project X 37248610 37269917 - MGP_LPJ_P0095689 Thoc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0095690.1 MGP_LPJ_G0035562.1 mouse_genomes_project X 37255479 37271372 - Thoc2 protein_coding retained_intron MGP_LPJ_T0009376.1 MGP_LPJ_G0007531.1 mouse_genomes_project X 7334306 7349481 - Gm14635 lincRNA lincRNA MGP_LPJ_T0009377.1 MGP_LPJ_G0007531.1 mouse_genomes_project X 7335161 7339706 - Gm14635 lincRNA lincRNA MGP_LPJ_T0011242.1 MGP_LPJ_G0009360.1 mouse_genomes_project X 150752456 150752564 + Mir98 miRNA miRNA MGP_LPJ_T0096041.1 MGP_LPJ_G0035680.1 mouse_genomes_project X 68534011 68552099 + MGP_LPJ_P0096041 Cnga2 protein_coding protein_coding MGP_LPJ_T0096042.1 MGP_LPJ_G0035680.1 mouse_genomes_project X 68534017 68543456 + Cnga2 protein_coding processed_transcript MGP_LPJ_T0096423.1 MGP_LPJ_G0035751.1 mouse_genomes_project X 72055221 72062313 - MGP_LPJ_P0096423 Mtcp1 protein_coding protein_coding MGP_LPJ_T0096424.1 MGP_LPJ_G0035751.1 mouse_genomes_project X 72055427 72062188 - Mtcp1 protein_coding processed_transcript MGP_LPJ_T0096425.1 MGP_LPJ_G0035751.1 mouse_genomes_project X 72055554 72062358 - MGP_LPJ_P0096425 Mtcp1 protein_coding protein_coding MGP_LPJ_T0096426.1 MGP_LPJ_G0035751.1 mouse_genomes_project X 72058938 72062338 - Mtcp1 protein_coding retained_intron MGP_LPJ_T0016249.1 MGP_LPJ_G0014340.1 mouse_genomes_project X 37295425 37295998 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098345.1 MGP_LPJ_G0036626.1 mouse_genomes_project X 8256090 8256202 - n-R5s3 rRNA rRNA MGP_LPJ_T0095635.1 MGP_LPJ_G0035549.1 mouse_genomes_project X 33446821 33457880 - MGP_LPJ_P0095635 Rhox12 protein_coding protein_coding MGP_LPJ_T0102481.1 MGP_LPJ_G0040517.1 mouse_genomes_project X 31069184 31087126 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0016224.1 MGP_LPJ_G0014315.1 mouse_genomes_project X 31647172 31647466 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016544.1 MGP_LPJ_G0014635.1 mouse_genomes_project X 100864247 100864737 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016781.1 MGP_LPJ_G0014872.1 mouse_genomes_project X 149221554 149221833 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095584.1 MGP_LPJ_G0035519.1 mouse_genomes_project X 32350457 32352031 + MGP_LPJ_P0095584 Sowahd protein_coding protein_coding MGP_LPJ_T0016720.1 MGP_LPJ_G0014811.1 mouse_genomes_project X 136514446 136514653 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016505.1 MGP_LPJ_G0014596.1 mouse_genomes_project X 93606166 93607586 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011237.1 MGP_LPJ_G0009355.1 mouse_genomes_project X 145615002 145615140 + Gm24627 miRNA miRNA MGP_LPJ_T0102493.1 MGP_LPJ_G0040529.1 mouse_genomes_project X 71080555 71081668 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0016136.1 MGP_LPJ_G0014227.1 mouse_genomes_project X 685420 685930 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011768.1 MGP_LPJ_G0009886.1 mouse_genomes_project X 32376653 32376924 - Gm24809 misc_RNA misc_RNA MGP_LPJ_T0096056.1 MGP_LPJ_G0035687.1 mouse_genomes_project X 69470306 69507205 + MGP_LPJ_P0096056 Nsdhl protein_coding protein_coding MGP_LPJ_T0096057.1 MGP_LPJ_G0035687.1 mouse_genomes_project X 69482311 69502347 + Nsdhl protein_coding retained_intron MGP_LPJ_T0102520.1 MGP_LPJ_G0040556.1 mouse_genomes_project X 143847927 143849140 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0016463.1 MGP_LPJ_G0014554.1 mouse_genomes_project X 87059711 87060467 + processed_pseudogene processed_pseudogene MGP_LPJ_T0018623.1 MGP_LPJ_G0015709.1 mouse_genomes_project X 133140126 133154710 - 3632454L22Rik processed_transcript processed_transcript MGP_LPJ_T0018624.1 MGP_LPJ_G0015709.1 mouse_genomes_project X 133140925 133178918 - 3632454L22Rik processed_transcript processed_transcript MGP_LPJ_T0018625.1 MGP_LPJ_G0015709.1 mouse_genomes_project X 133145301 133155164 - 3632454L22Rik processed_transcript processed_transcript MGP_LPJ_T0016502.1 MGP_LPJ_G0014593.1 mouse_genomes_project X 92653871 92655942 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095136.1 MGP_LPJ_G0035389.1 mouse_genomes_project X 695414 697615 - MGP_LPJ_P0095136 AU022751 protein_coding protein_coding MGP_LPJ_T0095137.1 MGP_LPJ_G0035389.1 mouse_genomes_project X 695414 697615 - MGP_LPJ_P0095137 AU022751 protein_coding protein_coding MGP_LPJ_T0097056.1 MGP_LPJ_G0035956.1 mouse_genomes_project X 131875221 131889951 + MGP_LPJ_P0097056 Tnmd protein_coding protein_coding MGP_LPJ_T0095628.1 MGP_LPJ_G0035543.1 mouse_genomes_project X 33185789 33189896 - MGP_LPJ_P0095628 Rhox8 protein_coding protein_coding MGP_LPJ_T0016490.1 MGP_LPJ_G0014581.1 mouse_genomes_project X 91635572 91636190 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016726.1 MGP_LPJ_G0014817.1 mouse_genomes_project X 138280858 138280964 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016337.1 MGP_LPJ_G0014428.1 mouse_genomes_project X 59335607 59337440 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097167.1 MGP_LPJ_G0035989.1 mouse_genomes_project X 133980678 133987465 - MGP_LPJ_P0097167 protein_coding protein_coding MGP_LPJ_T0097168.1 MGP_LPJ_G0035989.1 mouse_genomes_project X 133980678 133983143 - MGP_LPJ_P0097168 protein_coding protein_coding MGP_LPJ_T0016537.1 MGP_LPJ_G0014628.1 mouse_genomes_project X 100170493 100171087 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016338.1 MGP_LPJ_G0014429.1 mouse_genomes_project X 59522163 59522465 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096466.1 MGP_LPJ_G0035773.1 mouse_genomes_project X 75093516 75095002 + MGP_LPJ_P0096466 4930480E11Rik protein_coding protein_coding MGP_LPJ_T0095664.1 MGP_LPJ_G0035559.1 mouse_genomes_project X 34707091 34710295 + MGP_LPJ_P0095664 Cypt14 protein_coding protein_coding MGP_LPJ_T0016822.1 MGP_LPJ_G0014913.1 mouse_genomes_project X 156667922 156668054 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016213.1 MGP_LPJ_G0014304.1 mouse_genomes_project X 17623388 17623931 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097217.1 MGP_LPJ_G0036011.1 mouse_genomes_project X 135204495 135225441 + MGP_LPJ_P0097217 Plp1 protein_coding protein_coding MGP_LPJ_T0097218.1 MGP_LPJ_G0036011.1 mouse_genomes_project X 135204614 135222365 + MGP_LPJ_P0097218 Plp1 protein_coding protein_coding MGP_LPJ_T0097219.1 MGP_LPJ_G0036011.1 mouse_genomes_project X 135215655 135217086 + Plp1 protein_coding retained_intron MGP_LPJ_T0097220.1 MGP_LPJ_G0036011.1 mouse_genomes_project X 135217744 135219361 + Plp1 protein_coding retained_intron MGP_LPJ_T0016861.1 MGP_LPJ_G0014952.1 mouse_genomes_project X 164100800 164101077 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095861.1 MGP_LPJ_G0035618.1 mouse_genomes_project X 49384371 49397770 + MGP_LPJ_P0095861 4930502E18Rik protein_coding protein_coding MGP_LPJ_T0096380.1 MGP_LPJ_G0035741.1 mouse_genomes_project X 71224899 71435326 - MGP_LPJ_P0096380 protein_coding protein_coding MGP_LPJ_T0099896.1 MGP_LPJ_G0038159.1 mouse_genomes_project X 53899433 53899540 + Gm25023 snRNA snRNA MGP_LPJ_T0016228.1 MGP_LPJ_G0014319.1 mouse_genomes_project X 33764931 33766725 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016346.1 MGP_LPJ_G0014437.1 mouse_genomes_project X 62366673 62366935 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101174.1 MGP_LPJ_G0039437.1 mouse_genomes_project X 91672220 91672330 - Gm24595 snoRNA snoRNA MGP_LPJ_T0102488.1 MGP_LPJ_G0040524.1 mouse_genomes_project X 41957749 41958520 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0018558.1 MGP_LPJ_G0015690.1 mouse_genomes_project X 7775828 7835426 + Gm14634 processed_transcript processed_transcript MGP_LPJ_T0018559.1 MGP_LPJ_G0015690.1 mouse_genomes_project X 7776094 7832153 + Gm14634 processed_transcript processed_transcript MGP_LPJ_T0016869.1 MGP_LPJ_G0014960.1 mouse_genomes_project X 166191180 166191627 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097601.1 MGP_LPJ_G0036108.1 mouse_genomes_project X 154315765 154330247 - MGP_LPJ_P0097601 Prdx4 protein_coding protein_coding MGP_LPJ_T0097602.1 MGP_LPJ_G0036108.1 mouse_genomes_project X 154320334 154332534 - MGP_LPJ_P0097602 Prdx4 protein_coding protein_coding MGP_LPJ_T0097603.1 MGP_LPJ_G0036108.1 mouse_genomes_project X 154328571 154330254 - Prdx4 protein_coding processed_transcript MGP_LPJ_T0016324.1 MGP_LPJ_G0014415.1 mouse_genomes_project X 57375194 57375751 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095791.1 MGP_LPJ_G0035589.1 mouse_genomes_project X 44551383 44728788 - MGP_LPJ_P0095791 Enox2 protein_coding protein_coding MGP_LPJ_T0095792.1 MGP_LPJ_G0035589.1 mouse_genomes_project X 44602861 44837421 - Enox2 protein_coding processed_transcript MGP_LPJ_T0095793.1 MGP_LPJ_G0035589.1 mouse_genomes_project X 44606078 44837374 - Enox2 protein_coding processed_transcript MGP_LPJ_T0095794.1 MGP_LPJ_G0035589.1 mouse_genomes_project X 44610375 44837404 - Enox2 protein_coding processed_transcript MGP_LPJ_T0096483.1 MGP_LPJ_G0035777.1 mouse_genomes_project X 76338513 76387647 - MGP_LPJ_P0096483 protein_coding protein_coding MGP_LPJ_T0016343.1 MGP_LPJ_G0014434.1 mouse_genomes_project X 61335279 61335529 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009457.1 MGP_LPJ_G0007583.1 mouse_genomes_project X 166106676 166113457 - Gm15230 lincRNA lincRNA MGP_LPJ_T0016721.1 MGP_LPJ_G0014812.1 mouse_genomes_project X 136951602 136952845 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096950.1 MGP_LPJ_G0035914.1 mouse_genomes_project X 105590964 105624662 - MGP_LPJ_P0096950 2610002M06Rik protein_coding protein_coding MGP_LPJ_T0096951.1 MGP_LPJ_G0035914.1 mouse_genomes_project X 105596050 105602496 - 2610002M06Rik protein_coding retained_intron MGP_LPJ_T0099937.1 MGP_LPJ_G0038200.1 mouse_genomes_project X 144778847 144778907 - Gm26151 snRNA snRNA MGP_LPJ_T0099942.1 MGP_LPJ_G0038205.1 mouse_genomes_project X 153672841 153672949 + Gm22359 snRNA snRNA MGP_LPJ_T0097156.1 MGP_LPJ_G0035984.1 mouse_genomes_project X 133642204 133734247 + MGP_LPJ_P0097156 protein_coding protein_coding MGP_LPJ_T0016394.1 MGP_LPJ_G0014485.1 mouse_genomes_project X 72670982 72671420 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009406.1 MGP_LPJ_G0007552.1 mouse_genomes_project X 82702843 82704614 + Gm14762 lincRNA lincRNA MGP_LPJ_T0009407.1 MGP_LPJ_G0007552.1 mouse_genomes_project X 82703612 82712022 + Gm14762 lincRNA lincRNA MGP_LPJ_T0101445.1 MGP_LPJ_G0039607.1 mouse_genomes_project X 102653338 102654292 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0016469.1 MGP_LPJ_G0014560.1 mouse_genomes_project X 88352794 88353457 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016867.1 MGP_LPJ_G0014958.1 mouse_genomes_project X 165741645 165742471 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096899.1 MGP_LPJ_G0035898.1 mouse_genomes_project X 103700647 103749788 - MGP_LPJ_P0096899 Magt1 protein_coding protein_coding MGP_LPJ_T0096900.1 MGP_LPJ_G0035898.1 mouse_genomes_project X 103700647 103749795 - MGP_LPJ_P0096900 Magt1 protein_coding protein_coding MGP_LPJ_T0096901.1 MGP_LPJ_G0035898.1 mouse_genomes_project X 103703041 103749675 - MGP_LPJ_P0096901 Magt1 protein_coding protein_coding MGP_LPJ_T0096902.1 MGP_LPJ_G0035898.1 mouse_genomes_project X 103708902 103749669 - MGP_LPJ_P0096902 Magt1 protein_coding protein_coding MGP_LPJ_T0018622.1 MGP_LPJ_G0015708.1 mouse_genomes_project X 132758873 132760774 - B230119M05Rik processed_transcript processed_transcript MGP_LPJ_T0097192.1 MGP_LPJ_G0036000.1 mouse_genomes_project X 134493790 134508189 - MGP_LPJ_P0097192 Tceal6 protein_coding protein_coding MGP_LPJ_T0016134.1 MGP_LPJ_G0014225.1 mouse_genomes_project X 584236 584476 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097750.1 MGP_LPJ_G0036143.1 mouse_genomes_project X 163155868 163178983 - MGP_LPJ_P0097750 Zrsr2 protein_coding protein_coding MGP_LPJ_T0097751.1 MGP_LPJ_G0036143.1 mouse_genomes_project X 163159458 163170610 - Zrsr2 protein_coding retained_intron MGP_LPJ_T0097752.1 MGP_LPJ_G0036143.1 mouse_genomes_project X 163160361 163163870 - Zrsr2 protein_coding retained_intron MGP_LPJ_T0097753.1 MGP_LPJ_G0036143.1 mouse_genomes_project X 163169332 163170852 - Zrsr2 protein_coding retained_intron MGP_LPJ_T0097754.1 MGP_LPJ_G0036143.1 mouse_genomes_project X 163170779 163178992 - MGP_LPJ_P0097754 Zrsr2 protein_coding protein_coding MGP_LPJ_T0097755.1 MGP_LPJ_G0036143.1 mouse_genomes_project X 163173984 163178556 - Zrsr2 protein_coding processed_transcript MGP_LPJ_T0097756.1 MGP_LPJ_G0036143.1 mouse_genomes_project X 163174033 163178946 - MGP_LPJ_P0097756 Zrsr2 protein_coding protein_coding MGP_LPJ_T0097757.1 MGP_LPJ_G0036143.1 mouse_genomes_project X 163176865 163179055 - MGP_LPJ_P0097757 Zrsr2 protein_coding protein_coding MGP_LPJ_T0016296.1 MGP_LPJ_G0014387.1 mouse_genomes_project X 51620992 51621872 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005622.1 MGP_LPJ_G0004739.1 mouse_genomes_project X 91199035 91272767 + Gm14798 antisense antisense MGP_LPJ_T0102503.1 MGP_LPJ_G0040539.1 mouse_genomes_project X 83261225 83262248 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0005615.1 MGP_LPJ_G0004732.1 mouse_genomes_project X 66334803 66548566 - antisense antisense MGP_LPJ_T0097321.1 MGP_LPJ_G0036040.1 mouse_genomes_project X 139416527 139455709 + MGP_LPJ_P0097321 Vsig1 protein_coding protein_coding MGP_LPJ_T0097322.1 MGP_LPJ_G0036040.1 mouse_genomes_project X 139433099 139451443 + Vsig1 protein_coding processed_transcript MGP_LPJ_T0096235.1 MGP_LPJ_G0035720.1 mouse_genomes_project X 70724930 70739841 - MGP_LPJ_P0096235 Tex28 protein_coding protein_coding MGP_LPJ_T0096236.1 MGP_LPJ_G0035720.1 mouse_genomes_project X 70724930 70739841 - MGP_LPJ_P0096236 Tex28 protein_coding protein_coding MGP_LPJ_T0097579.1 MGP_LPJ_G0036097.1 mouse_genomes_project X 152460408 152461239 + MGP_LPJ_P0097579 Cypt3 protein_coding protein_coding MGP_LPJ_T0097580.1 MGP_LPJ_G0036097.1 mouse_genomes_project X 152460408 152461245 + MGP_LPJ_P0097580 Cypt3 protein_coding protein_coding MGP_LPJ_T0097637.1 MGP_LPJ_G0036118.1 mouse_genomes_project X 158267830 158424537 + MGP_LPJ_P0097637 Rps6ka3 protein_coding protein_coding MGP_LPJ_T0097638.1 MGP_LPJ_G0036118.1 mouse_genomes_project X 158314791 158369774 + MGP_LPJ_P0097638 Rps6ka3 protein_coding protein_coding MGP_LPJ_T0097639.1 MGP_LPJ_G0036118.1 mouse_genomes_project X 158314867 158428279 + MGP_LPJ_P0097639 Rps6ka3 protein_coding protein_coding MGP_LPJ_T0097640.1 MGP_LPJ_G0036118.1 mouse_genomes_project X 158314934 158386183 + MGP_LPJ_P0097640 Rps6ka3 protein_coding protein_coding MGP_LPJ_T0097641.1 MGP_LPJ_G0036118.1 mouse_genomes_project X 158315135 158386273 + MGP_LPJ_P0097641 Rps6ka3 protein_coding protein_coding MGP_LPJ_T0097642.1 MGP_LPJ_G0036118.1 mouse_genomes_project X 158335280 158384681 + MGP_LPJ_P0097642 Rps6ka3 protein_coding protein_coding MGP_LPJ_T0097643.1 MGP_LPJ_G0036118.1 mouse_genomes_project X 158361529 158388686 + MGP_LPJ_P0097643 Rps6ka3 protein_coding protein_coding MGP_LPJ_T0097644.1 MGP_LPJ_G0036118.1 mouse_genomes_project X 158422355 158423540 + Rps6ka3 protein_coding processed_transcript MGP_LPJ_T0097645.1 MGP_LPJ_G0036118.1 mouse_genomes_project X 158422440 158423775 + Rps6ka3 protein_coding retained_intron MGP_LPJ_T0016268.1 MGP_LPJ_G0014359.1 mouse_genomes_project X 42837136 42838038 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016329.1 MGP_LPJ_G0014420.1 mouse_genomes_project X 57833295 57834361 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101446.1 MGP_LPJ_G0039608.1 mouse_genomes_project X 105334522 105335741 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101447.1 MGP_LPJ_G0039608.1 mouse_genomes_project X 105334531 105335686 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0095555.1 MGP_LPJ_G0035509.1 mouse_genomes_project X 31596584 31611842 + Lonrf3 protein_coding retained_intron MGP_LPJ_T0095556.1 MGP_LPJ_G0035509.1 mouse_genomes_project X 31596584 31631517 + MGP_LPJ_P0095556 Lonrf3 protein_coding protein_coding MGP_LPJ_T0095557.1 MGP_LPJ_G0035509.1 mouse_genomes_project X 31597447 31610985 + MGP_LPJ_P0095557 Lonrf3 protein_coding protein_coding MGP_LPJ_T0011141.1 MGP_LPJ_G0009259.1 mouse_genomes_project X 10863272 10863336 + Gm22464 miRNA miRNA MGP_LPJ_T0096195.1 MGP_LPJ_G0035716.1 mouse_genomes_project X 70509270 70532835 - MGP_LPJ_P0096195 Hcfc1 protein_coding protein_coding MGP_LPJ_T0096196.1 MGP_LPJ_G0035716.1 mouse_genomes_project X 70509273 70515735 - MGP_LPJ_P0096196 Hcfc1 protein_coding protein_coding MGP_LPJ_T0096197.1 MGP_LPJ_G0035716.1 mouse_genomes_project X 70509275 70532829 - MGP_LPJ_P0096197 Hcfc1 protein_coding protein_coding MGP_LPJ_T0096198.1 MGP_LPJ_G0035716.1 mouse_genomes_project X 70511799 70513911 - Hcfc1 protein_coding retained_intron MGP_LPJ_T0096199.1 MGP_LPJ_G0035716.1 mouse_genomes_project X 70513673 70514825 - Hcfc1 protein_coding processed_transcript MGP_LPJ_T0096200.1 MGP_LPJ_G0035716.1 mouse_genomes_project X 70521600 70523909 - Hcfc1 protein_coding processed_transcript MGP_LPJ_T0095138.1 MGP_LPJ_G0035390.1 mouse_genomes_project X 936942 943557 - MGP_LPJ_P0095138 Bmp15 protein_coding protein_coding MGP_LPJ_T0099946.1 MGP_LPJ_G0038209.1 mouse_genomes_project X 162053444 162053551 - Gm23901 snRNA snRNA MGP_LPJ_T0016501.1 MGP_LPJ_G0014592.1 mouse_genomes_project X 92604288 92605271 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095996.1 MGP_LPJ_G0035669.1 mouse_genomes_project X 67102076 67102580 - MGP_LPJ_P0095996 protein_coding protein_coding MGP_LPJ_T0005624.1 MGP_LPJ_G0004741.1 mouse_genomes_project X 93626248 93629959 + F630028O10Rik antisense antisense MGP_LPJ_T0005625.1 MGP_LPJ_G0004741.1 mouse_genomes_project X 93626288 93629959 + F630028O10Rik antisense antisense MGP_LPJ_T0098363.1 MGP_LPJ_G0036644.1 mouse_genomes_project X 163346947 163347068 + n-R5s18 rRNA rRNA MGP_LPJ_T0101434.1 MGP_LPJ_G0039600.1 mouse_genomes_project X 18538861 18539419 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0016691.1 MGP_LPJ_G0014782.1 mouse_genomes_project X 132827832 132828263 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011210.1 MGP_LPJ_G0009328.1 mouse_genomes_project X 97801205 97801294 + Mir676 miRNA miRNA MGP_LPJ_T0011133.1 MGP_LPJ_G0009251.1 mouse_genomes_project X 1834039 1834131 - Mir500 miRNA miRNA MGP_LPJ_T0095965.1 MGP_LPJ_G0035658.1 mouse_genomes_project X 64090985 64101466 + MGP_LPJ_P0095965 Gm14692 protein_coding protein_coding MGP_LPJ_T0016133.1 MGP_LPJ_G0014224.1 mouse_genomes_project X 472003 473824 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009410.1 MGP_LPJ_G0007555.1 mouse_genomes_project X 92047831 92073299 + lincRNA lincRNA MGP_LPJ_T0016533.1 MGP_LPJ_G0014624.1 mouse_genomes_project X 99602194 99603442 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011199.1 MGP_LPJ_G0009317.1 mouse_genomes_project X 69541282 69541348 + Mir2137 miRNA miRNA MGP_LPJ_T0016304.1 MGP_LPJ_G0014395.1 mouse_genomes_project X 54107540 54107864 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096700.1 MGP_LPJ_G0035843.1 mouse_genomes_project X 98067216 98169476 + MGP_LPJ_P0096700 Kif4 protein_coding protein_coding MGP_LPJ_T0096701.1 MGP_LPJ_G0035843.1 mouse_genomes_project X 98075408 98077756 + Kif4 protein_coding retained_intron MGP_LPJ_T0096702.1 MGP_LPJ_G0035843.1 mouse_genomes_project X 98154176 98166912 + Kif4 protein_coding processed_transcript MGP_LPJ_T0016233.1 MGP_LPJ_G0014324.1 mouse_genomes_project X 34592385 34592706 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098351.1 MGP_LPJ_G0036632.1 mouse_genomes_project X 73523458 73523566 - Gm26041 rRNA rRNA MGP_LPJ_T0096376.1 MGP_LPJ_G0035737.1 mouse_genomes_project X 71080406 71081668 - MGP_LPJ_P0096376 Gm6880 protein_coding protein_coding MGP_LPJ_T0097800.1 MGP_LPJ_G0036156.1 mouse_genomes_project X 164241782 164242841 - MGP_LPJ_P0097800 Gm17604 protein_coding protein_coding MGP_LPJ_T0016560.1 MGP_LPJ_G0014651.1 mouse_genomes_project X 101463327 101463635 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016717.1 MGP_LPJ_G0014808.1 mouse_genomes_project X 135561815 135562571 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016377.1 MGP_LPJ_G0014468.1 mouse_genomes_project X 69875032 69875464 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016259.1 MGP_LPJ_G0014350.1 mouse_genomes_project X 39854220 39854615 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016357.1 MGP_LPJ_G0014448.1 mouse_genomes_project X 64721576 64722189 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016727.1 MGP_LPJ_G0014818.1 mouse_genomes_project X 138382985 138384467 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016219.1 MGP_LPJ_G0014310.1 mouse_genomes_project X 27309139 27309715 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011217.1 MGP_LPJ_G0009335.1 mouse_genomes_project X 101805400 101805500 - Mir672 miRNA miRNA MGP_LPJ_T0016684.1 MGP_LPJ_G0014775.1 mouse_genomes_project X 131126721 131128344 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016695.1 MGP_LPJ_G0014786.1 mouse_genomes_project X 132922430 132923292 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011235.1 MGP_LPJ_G0009353.1 mouse_genomes_project X 145515824 145515910 + Mir1264 miRNA miRNA MGP_LPJ_T0016645.1 MGP_LPJ_G0014736.1 mouse_genomes_project X 117853354 117854210 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016289.1 MGP_LPJ_G0014380.1 mouse_genomes_project X 48891826 48892460 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095740.1 MGP_LPJ_G0035575.1 mouse_genomes_project X 43523505 43532995 - MGP_LPJ_P0095740 Apln protein_coding protein_coding MGP_LPJ_T0097728.1 MGP_LPJ_G0036137.1 mouse_genomes_project X 162062546 162093545 - MGP_LPJ_P0097728 Syap1 protein_coding protein_coding MGP_LPJ_T0097729.1 MGP_LPJ_G0036137.1 mouse_genomes_project X 162063398 162068882 - Syap1 protein_coding retained_intron MGP_LPJ_T0016840.1 MGP_LPJ_G0014931.1 mouse_genomes_project X 159375349 159375612 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099927.1 MGP_LPJ_G0038190.1 mouse_genomes_project X 119735340 119735440 + Gm24783 snRNA snRNA MGP_LPJ_T0016196.1 MGP_LPJ_G0014287.1 mouse_genomes_project X 14847438 14847835 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016576.1 MGP_LPJ_G0014667.1 mouse_genomes_project X 104383271 104383564 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101204.1 MGP_LPJ_G0039467.1 mouse_genomes_project X 161945642 161945763 + Gm23786 snoRNA snoRNA MGP_LPJ_T0096223.1 MGP_LPJ_G0035718.1 mouse_genomes_project X 70594126 70658051 - MGP_LPJ_P0096223 Mecp2 protein_coding protein_coding MGP_LPJ_T0096224.1 MGP_LPJ_G0035718.1 mouse_genomes_project X 70594362 70652415 - MGP_LPJ_P0096224 Mecp2 protein_coding protein_coding MGP_LPJ_T0096225.1 MGP_LPJ_G0035718.1 mouse_genomes_project X 70602823 70658072 - MGP_LPJ_P0096225 Mecp2 protein_coding protein_coding MGP_LPJ_T0096226.1 MGP_LPJ_G0035718.1 mouse_genomes_project X 70602824 70657994 - MGP_LPJ_P0096226 Mecp2 protein_coding protein_coding MGP_LPJ_T0096227.1 MGP_LPJ_G0035718.1 mouse_genomes_project X 70603205 70657992 - MGP_LPJ_P0096227 Mecp2 protein_coding protein_coding MGP_LPJ_T0096228.1 MGP_LPJ_G0035718.1 mouse_genomes_project X 70653412 70657979 - Mecp2 protein_coding retained_intron MGP_LPJ_T0016872.1 MGP_LPJ_G0014963.1 mouse_genomes_project X 167055590 167056886 + processed_pseudogene processed_pseudogene MGP_LPJ_T0018551.1 MGP_LPJ_G0015686.1 mouse_genomes_project X 2016008 2025277 - 2010204K13Rik processed_transcript processed_transcript MGP_LPJ_T0018552.1 MGP_LPJ_G0015686.1 mouse_genomes_project X 2016278 2017017 - 2010204K13Rik processed_transcript processed_transcript MGP_LPJ_T0018553.1 MGP_LPJ_G0015686.1 mouse_genomes_project X 2016294 2027180 - 2010204K13Rik processed_transcript processed_transcript MGP_LPJ_T0018554.1 MGP_LPJ_G0015686.1 mouse_genomes_project X 2016297 2051689 - 2010204K13Rik processed_transcript processed_transcript MGP_LPJ_T0099917.1 MGP_LPJ_G0038180.1 mouse_genomes_project X 103575673 103575785 + Gm23656 snRNA snRNA MGP_LPJ_T0005619.1 MGP_LPJ_G0004736.1 mouse_genomes_project X 72235188 72237007 + Gm15063 antisense antisense MGP_LPJ_T0016686.1 MGP_LPJ_G0014777.1 mouse_genomes_project X 131426477 131427213 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095992.1 MGP_LPJ_G0035668.1 mouse_genomes_project X 66892068 66911419 - MGP_LPJ_P0095992 Tmem185a protein_coding protein_coding MGP_LPJ_T0095993.1 MGP_LPJ_G0035668.1 mouse_genomes_project X 66893274 66911419 - MGP_LPJ_P0095993 Tmem185a protein_coding protein_coding MGP_LPJ_T0095994.1 MGP_LPJ_G0035668.1 mouse_genomes_project X 66893369 66904430 - Tmem185a protein_coding processed_transcript MGP_LPJ_T0095995.1 MGP_LPJ_G0035668.1 mouse_genomes_project X 66895238 66911381 - Tmem185a protein_coding processed_transcript MGP_LPJ_T0016347.1 MGP_LPJ_G0014438.1 mouse_genomes_project X 63124931 63126124 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095838.1 MGP_LPJ_G0035607.1 mouse_genomes_project X 48473122 48510426 + MGP_LPJ_P0095838 Phf6 protein_coding protein_coding MGP_LPJ_T0095839.1 MGP_LPJ_G0035607.1 mouse_genomes_project X 48473128 48519402 + MGP_LPJ_P0095839 Phf6 protein_coding protein_coding MGP_LPJ_T0095840.1 MGP_LPJ_G0035607.1 mouse_genomes_project X 48486506 48502551 + Phf6 protein_coding processed_transcript MGP_LPJ_T0095841.1 MGP_LPJ_G0035607.1 mouse_genomes_project X 48486506 48502532 + Phf6 protein_coding processed_transcript MGP_LPJ_T0097247.1 MGP_LPJ_G0036019.1 mouse_genomes_project X 136634272 136635688 - MGP_LPJ_P0097247 Tex13a protein_coding protein_coding MGP_LPJ_T0096687.1 MGP_LPJ_G0035840.1 mouse_genomes_project X 98031581 98036297 - MGP_LPJ_P0096687 P2ry4 protein_coding protein_coding MGP_LPJ_T0099897.1 MGP_LPJ_G0038160.1 mouse_genomes_project X 54271899 54272006 - Gm25851 snRNA snRNA MGP_LPJ_T0096527.1 MGP_LPJ_G0035793.1 mouse_genomes_project X 87845411 87846404 + MGP_LPJ_P0096527 Gm44 protein_coding protein_coding MGP_LPJ_T0101150.1 MGP_LPJ_G0039413.1 mouse_genomes_project X 32048319 32048406 + Gm23613 snoRNA snoRNA MGP_LPJ_T0011788.1 MGP_LPJ_G0009906.1 mouse_genomes_project X 130695970 130696173 + Gm22143 misc_RNA misc_RNA MGP_LPJ_T0016370.1 MGP_LPJ_G0014461.1 mouse_genomes_project X 67069027 67069403 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097253.1 MGP_LPJ_G0036021.1 mouse_genomes_project X 137528186 137534145 - MGP_LPJ_P0097253 Serpina7 protein_coding protein_coding MGP_LPJ_T0097254.1 MGP_LPJ_G0036021.1 mouse_genomes_project X 137528186 137534147 - MGP_LPJ_P0097254 Serpina7 protein_coding protein_coding MGP_LPJ_T0097255.1 MGP_LPJ_G0036021.1 mouse_genomes_project X 137532415 137534166 - MGP_LPJ_P0097255 Serpina7 protein_coding protein_coding MGP_LPJ_T0095834.1 MGP_LPJ_G0035604.1 mouse_genomes_project X 47558344 47676372 - MGP_LPJ_P0095834 Gpc4 protein_coding protein_coding MGP_LPJ_T0016420.1 MGP_LPJ_G0014511.1 mouse_genomes_project X 77094797 77095482 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011190.1 MGP_LPJ_G0009308.1 mouse_genomes_project X 63198187 63198261 - Mir465 miRNA miRNA MGP_LPJ_T0097326.1 MGP_LPJ_G0036043.1 mouse_genomes_project X 139561882 139568484 + MGP_LPJ_P0097326 protein_coding protein_coding MGP_LPJ_T0097266.1 MGP_LPJ_G0036025.1 mouse_genomes_project X 137809446 137815395 + MGP_LPJ_P0097266 Trap1a protein_coding protein_coding MGP_LPJ_T0016192.1 MGP_LPJ_G0014283.1 mouse_genomes_project X 13535943 13536100 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016369.1 MGP_LPJ_G0014460.1 mouse_genomes_project X 67041499 67042044 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097331.1 MGP_LPJ_G0036045.1 mouse_genomes_project X 139881615 140097946 + MGP_LPJ_P0097331 Col4a5 protein_coding protein_coding MGP_LPJ_T0097332.1 MGP_LPJ_G0036045.1 mouse_genomes_project X 139881640 140097892 + MGP_LPJ_P0097332 Col4a5 protein_coding protein_coding MGP_LPJ_T0097333.1 MGP_LPJ_G0036045.1 mouse_genomes_project X 140034877 140097946 + MGP_LPJ_P0097333 Col4a5 protein_coding protein_coding MGP_LPJ_T0097334.1 MGP_LPJ_G0036045.1 mouse_genomes_project X 140063963 140083150 + Col4a5 protein_coding processed_transcript MGP_LPJ_T0011205.1 MGP_LPJ_G0009323.1 mouse_genomes_project X 82449744 82449827 + Gm44378 miRNA miRNA MGP_LPJ_T0016434.1 MGP_LPJ_G0014525.1 mouse_genomes_project X 82306060 82306386 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095647.1 MGP_LPJ_G0035554.1 mouse_genomes_project X 33771176 33827254 - MGP_LPJ_P0095647 Lamp2 protein_coding protein_coding MGP_LPJ_T0095648.1 MGP_LPJ_G0035554.1 mouse_genomes_project X 33774883 33827254 - MGP_LPJ_P0095648 Lamp2 protein_coding protein_coding MGP_LPJ_T0095649.1 MGP_LPJ_G0035554.1 mouse_genomes_project X 33789327 33827254 - MGP_LPJ_P0095649 Lamp2 protein_coding protein_coding MGP_LPJ_T0095650.1 MGP_LPJ_G0035554.1 mouse_genomes_project X 33799694 33813736 - Lamp2 protein_coding retained_intron MGP_LPJ_T0095651.1 MGP_LPJ_G0035554.1 mouse_genomes_project X 33823682 33827214 - Lamp2 protein_coding processed_transcript MGP_LPJ_T0016294.1 MGP_LPJ_G0014385.1 mouse_genomes_project X 49530788 49531274 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096069.1 MGP_LPJ_G0035695.1 mouse_genomes_project X 69903131 69919549 + MGP_LPJ_P0096069 Zfp275 protein_coding protein_coding MGP_LPJ_T0096070.1 MGP_LPJ_G0035695.1 mouse_genomes_project X 69904930 69912308 + Zfp275 protein_coding retained_intron MGP_LPJ_T0016201.1 MGP_LPJ_G0014292.1 mouse_genomes_project X 15496080 15497152 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097314.1 MGP_LPJ_G0036038.1 mouse_genomes_project X 139175420 139189529 + MGP_LPJ_P0097314 Mid2 protein_coding protein_coding MGP_LPJ_T0097315.1 MGP_LPJ_G0036038.1 mouse_genomes_project X 139175777 139274996 + MGP_LPJ_P0097315 Mid2 protein_coding protein_coding MGP_LPJ_T0097316.1 MGP_LPJ_G0036038.1 mouse_genomes_project X 139175893 139271276 + MGP_LPJ_P0097316 Mid2 protein_coding protein_coding MGP_LPJ_T0097317.1 MGP_LPJ_G0036038.1 mouse_genomes_project X 139188848 139274996 + MGP_LPJ_P0097317 Mid2 protein_coding protein_coding MGP_LPJ_T0097318.1 MGP_LPJ_G0036038.1 mouse_genomes_project X 139256321 139259466 + Mid2 protein_coding retained_intron MGP_LPJ_T0097719.1 MGP_LPJ_G0036135.1 mouse_genomes_project X 161960725 161979129 + MGP_LPJ_P0097719 Rbbp7 protein_coding protein_coding MGP_LPJ_T0097720.1 MGP_LPJ_G0036135.1 mouse_genomes_project X 161960744 161978793 + MGP_LPJ_P0097720 Rbbp7 protein_coding protein_coding MGP_LPJ_T0097721.1 MGP_LPJ_G0036135.1 mouse_genomes_project X 161960785 161976087 + MGP_LPJ_P0097721 Rbbp7 protein_coding protein_coding MGP_LPJ_T0097722.1 MGP_LPJ_G0036135.1 mouse_genomes_project X 161961354 161972422 + MGP_LPJ_P0097722 Rbbp7 protein_coding protein_coding MGP_LPJ_T0097723.1 MGP_LPJ_G0036135.1 mouse_genomes_project X 161974769 161978482 + MGP_LPJ_P0097723 Rbbp7 protein_coding protein_coding MGP_LPJ_T0016631.1 MGP_LPJ_G0014722.1 mouse_genomes_project X 115133108 115134201 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099916.1 MGP_LPJ_G0038179.1 mouse_genomes_project X 103512636 103512819 + Gm26020 snRNA snRNA MGP_LPJ_T0097057.1 MGP_LPJ_G0035957.1 mouse_genomes_project X 131914352 131921705 - MGP_LPJ_P0097057 Tspan6 protein_coding protein_coding MGP_LPJ_T0097058.1 MGP_LPJ_G0035957.1 mouse_genomes_project X 131915985 131921570 - MGP_LPJ_P0097058 Tspan6 protein_coding protein_coding MGP_LPJ_T0097059.1 MGP_LPJ_G0035957.1 mouse_genomes_project X 131917804 131921570 - MGP_LPJ_P0097059 Tspan6 protein_coding protein_coding MGP_LPJ_T0097060.1 MGP_LPJ_G0035957.1 mouse_genomes_project X 131920001 131921389 - Tspan6 protein_coding processed_transcript MGP_LPJ_T0097044.1 MGP_LPJ_G0035954.1 mouse_genomes_project X 127669362 128098268 + Diaph2 protein_coding retained_intron MGP_LPJ_T0097045.1 MGP_LPJ_G0035954.1 mouse_genomes_project X 127669362 128390569 + MGP_LPJ_P0097045 Diaph2 protein_coding protein_coding MGP_LPJ_T0097046.1 MGP_LPJ_G0035954.1 mouse_genomes_project X 127669416 128248107 + Diaph2 protein_coding retained_intron MGP_LPJ_T0097047.1 MGP_LPJ_G0035954.1 mouse_genomes_project X 127669425 128385987 + MGP_LPJ_P0097047 Diaph2 protein_coding protein_coding MGP_LPJ_T0097048.1 MGP_LPJ_G0035954.1 mouse_genomes_project X 127669444 128247780 + Diaph2 protein_coding retained_intron MGP_LPJ_T0097049.1 MGP_LPJ_G0035954.1 mouse_genomes_project X 127669596 128390572 + MGP_LPJ_P0097049 Diaph2 protein_coding protein_coding MGP_LPJ_T0097050.1 MGP_LPJ_G0035954.1 mouse_genomes_project X 127888454 127954469 + Diaph2 protein_coding processed_transcript MGP_LPJ_T0097788.1 MGP_LPJ_G0036154.1 mouse_genomes_project X 164174061 164217262 - MGP_LPJ_P0097788 Mospd2 protein_coding protein_coding MGP_LPJ_T0097789.1 MGP_LPJ_G0036154.1 mouse_genomes_project X 164174886 164217184 - MGP_LPJ_P0097789 Mospd2 protein_coding protein_coding MGP_LPJ_T0097790.1 MGP_LPJ_G0036154.1 mouse_genomes_project X 164176777 164217222 - MGP_LPJ_P0097790 Mospd2 protein_coding protein_coding MGP_LPJ_T0097791.1 MGP_LPJ_G0036154.1 mouse_genomes_project X 164192751 164217215 - Mospd2 protein_coding retained_intron MGP_LPJ_T0097792.1 MGP_LPJ_G0036154.1 mouse_genomes_project X 164192756 164217215 - Mospd2 protein_coding retained_intron MGP_LPJ_T0097793.1 MGP_LPJ_G0036154.1 mouse_genomes_project X 164197835 164217212 - Mospd2 protein_coding retained_intron MGP_LPJ_T0097794.1 MGP_LPJ_G0036154.1 mouse_genomes_project X 164201603 164217214 - Mospd2 protein_coding retained_intron MGP_LPJ_T0097795.1 MGP_LPJ_G0036154.1 mouse_genomes_project X 164201929 164217230 - Mospd2 protein_coding processed_transcript MGP_LPJ_T0097796.1 MGP_LPJ_G0036154.1 mouse_genomes_project X 164216547 164217209 - Mospd2 protein_coding retained_intron MGP_LPJ_T0016375.1 MGP_LPJ_G0014466.1 mouse_genomes_project X 68259017 68259232 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097337.1 MGP_LPJ_G0036048.1 mouse_genomes_project X 140309879 140311683 - Gm15294 protein_coding translated_processed_pseudogene MGP_LPJ_T0097338.1 MGP_LPJ_G0036048.1 mouse_genomes_project X 140310952 140311318 - MGP_LPJ_P0097338 Gm15294 protein_coding protein_coding MGP_LPJ_T0009408.1 MGP_LPJ_G0007553.1 mouse_genomes_project X 88123491 88124115 + Gm14773 lincRNA lincRNA MGP_LPJ_T0097414.1 MGP_LPJ_G0036068.1 mouse_genomes_project X 149180672 149231135 - MGP_LPJ_P0097414 Tmem29 protein_coding protein_coding MGP_LPJ_T0097415.1 MGP_LPJ_G0036068.1 mouse_genomes_project X 149180672 149250525 - MGP_LPJ_P0097415 Tmem29 protein_coding protein_coding MGP_LPJ_T0097416.1 MGP_LPJ_G0036068.1 mouse_genomes_project X 149181694 149250525 - Tmem29 protein_coding processed_transcript MGP_LPJ_T0097417.1 MGP_LPJ_G0036068.1 mouse_genomes_project X 149191451 149250529 - Tmem29 protein_coding processed_transcript MGP_LPJ_T0097418.1 MGP_LPJ_G0036068.1 mouse_genomes_project X 149191451 149231104 - Tmem29 protein_coding processed_transcript MGP_LPJ_T0097419.1 MGP_LPJ_G0036068.1 mouse_genomes_project X 149191457 149230903 - MGP_LPJ_P0097419 Tmem29 protein_coding protein_coding MGP_LPJ_T0097420.1 MGP_LPJ_G0036068.1 mouse_genomes_project X 149191793 149250529 - Tmem29 protein_coding processed_transcript MGP_LPJ_T0097421.1 MGP_LPJ_G0036068.1 mouse_genomes_project X 149191979 149225520 - Tmem29 protein_coding processed_transcript MGP_LPJ_T0097422.1 MGP_LPJ_G0036068.1 mouse_genomes_project X 149192044 149230903 - Tmem29 protein_coding processed_transcript MGP_LPJ_T0097423.1 MGP_LPJ_G0036068.1 mouse_genomes_project X 149199835 149250529 - Tmem29 protein_coding retained_intron MGP_LPJ_T0097424.1 MGP_LPJ_G0036068.1 mouse_genomes_project X 149227146 149231161 - Tmem29 protein_coding processed_transcript MGP_LPJ_T0097425.1 MGP_LPJ_G0036068.1 mouse_genomes_project X 149227951 149230787 - Tmem29 protein_coding processed_transcript MGP_LPJ_T0016246.1 MGP_LPJ_G0014337.1 mouse_genomes_project X 37080482 37080866 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016807.1 MGP_LPJ_G0014898.1 mouse_genomes_project X 154163493 154164123 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016356.1 MGP_LPJ_G0014447.1 mouse_genomes_project X 64717969 64718335 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095652.1 MGP_LPJ_G0035555.1 mouse_genomes_project X 33900603 33931694 - MGP_LPJ_P0095652 Cul4b protein_coding protein_coding MGP_LPJ_T0095653.1 MGP_LPJ_G0035555.1 mouse_genomes_project X 33900603 33947132 - MGP_LPJ_P0095653 Cul4b protein_coding protein_coding MGP_LPJ_T0095654.1 MGP_LPJ_G0035555.1 mouse_genomes_project X 33900899 33931831 - MGP_LPJ_P0095654 Cul4b protein_coding nonsense_mediated_decay MGP_LPJ_T0095655.1 MGP_LPJ_G0035555.1 mouse_genomes_project X 33900903 33947119 - MGP_LPJ_P0095655 Cul4b protein_coding protein_coding MGP_LPJ_T0016613.1 MGP_LPJ_G0014704.1 mouse_genomes_project X 111660373 111661942 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097158.1 MGP_LPJ_G0035986.1 mouse_genomes_project X 133810624 133832479 - MGP_LPJ_P0097158 Nxf7 protein_coding protein_coding MGP_LPJ_T0097159.1 MGP_LPJ_G0035986.1 mouse_genomes_project X 133810624 133842168 - MGP_LPJ_P0097159 Nxf7 protein_coding protein_coding MGP_LPJ_T0097160.1 MGP_LPJ_G0035986.1 mouse_genomes_project X 133810832 133837285 - MGP_LPJ_P0097160 Nxf7 protein_coding protein_coding MGP_LPJ_T0097161.1 MGP_LPJ_G0035986.1 mouse_genomes_project X 133827775 133829529 - Nxf7 protein_coding retained_intron MGP_LPJ_T0097162.1 MGP_LPJ_G0035986.1 mouse_genomes_project X 133831838 133842149 - MGP_LPJ_P0097162 Nxf7 protein_coding protein_coding MGP_LPJ_T0097163.1 MGP_LPJ_G0035986.1 mouse_genomes_project X 133832021 133840099 - MGP_LPJ_P0097163 Nxf7 protein_coding protein_coding MGP_LPJ_T0095395.1 MGP_LPJ_G0035459.1 mouse_genomes_project X 7667443 7686125 - MGP_LPJ_P0095395 1810030O07Rik protein_coding protein_coding MGP_LPJ_T0009427.1 MGP_LPJ_G0007563.1 mouse_genomes_project X 102523015 102547120 + 1700121L16Rik lincRNA lincRNA MGP_LPJ_T0097193.1 MGP_LPJ_G0036001.1 mouse_genomes_project X 134507770 134508381 - MGP_LPJ_P0097193 Bex1 protein_coding protein_coding MGP_LPJ_T0097194.1 MGP_LPJ_G0036001.1 mouse_genomes_project X 134508341 134508765 - Bex1 protein_coding retained_intron MGP_LPJ_T0016866.1 MGP_LPJ_G0014957.1 mouse_genomes_project X 165738265 165739663 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098433.1 MGP_LPJ_G0036714.1 mouse_genomes_project X 31099167 31099442 + Gm25624 scaRNA scaRNA MGP_LPJ_T0096688.1 MGP_LPJ_G0035841.1 mouse_genomes_project X 98038273 98059868 + MGP_LPJ_P0096688 Arr3 protein_coding unknown_likely_coding MGP_LPJ_T0096689.1 MGP_LPJ_G0035841.1 mouse_genomes_project X 98046967 98059974 + MGP_LPJ_P0096689 Arr3 protein_coding protein_coding MGP_LPJ_T0096690.1 MGP_LPJ_G0035841.1 mouse_genomes_project X 98046993 98055114 + Arr3 protein_coding retained_intron MGP_LPJ_T0096691.1 MGP_LPJ_G0035841.1 mouse_genomes_project X 98047014 98054554 + Arr3 protein_coding retained_intron MGP_LPJ_T0096692.1 MGP_LPJ_G0035841.1 mouse_genomes_project X 98047025 98055322 + Arr3 protein_coding retained_intron MGP_LPJ_T0096693.1 MGP_LPJ_G0035841.1 mouse_genomes_project X 98047032 98059974 + Arr3 protein_coding retained_intron MGP_LPJ_T0096694.1 MGP_LPJ_G0035841.1 mouse_genomes_project X 98047117 98053425 + MGP_LPJ_P0096694 Arr3 protein_coding protein_coding MGP_LPJ_T0096695.1 MGP_LPJ_G0035841.1 mouse_genomes_project X 98053319 98055921 + Arr3 protein_coding retained_intron MGP_LPJ_T0097256.1 MGP_LPJ_G0036022.1 mouse_genomes_project X 137535172 137542335 + MGP_LPJ_P0097256 4930513O06Rik protein_coding protein_coding MGP_LPJ_T0016473.1 MGP_LPJ_G0014564.1 mouse_genomes_project X 88624128 88625275 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101175.1 MGP_LPJ_G0039438.1 mouse_genomes_project X 98597296 98597416 - Gm24061 snoRNA snoRNA MGP_LPJ_T0099884.1 MGP_LPJ_G0038147.1 mouse_genomes_project X 18025438 18025548 + Gm26131 snRNA snRNA MGP_LPJ_T0097036.1 MGP_LPJ_G0035946.1 mouse_genomes_project X 120237705 120240542 - MGP_LPJ_P0097036 Nap1l3 protein_coding protein_coding MGP_LPJ_T0016705.1 MGP_LPJ_G0014796.1 mouse_genomes_project X 134957914 134958544 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016180.1 MGP_LPJ_G0014271.1 mouse_genomes_project X 8989065 8991290 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016792.1 MGP_LPJ_G0014883.1 mouse_genomes_project X 150597469 150598185 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016844.1 MGP_LPJ_G0014935.1 mouse_genomes_project X 159824872 159825002 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096958.1 MGP_LPJ_G0035917.1 mouse_genomes_project X 106513853 106514741 - MGP_LPJ_P0096958 Gm379 protein_coding protein_coding MGP_LPJ_T0016602.1 MGP_LPJ_G0014693.1 mouse_genomes_project X 110089574 110093445 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097195.1 MGP_LPJ_G0036002.1 mouse_genomes_project X 134508576 134518839 + MGP_LPJ_P0097195 Tceal7 protein_coding protein_coding MGP_LPJ_T0097196.1 MGP_LPJ_G0036002.1 mouse_genomes_project X 134517492 134519552 + MGP_LPJ_P0097196 Tceal7 protein_coding protein_coding MGP_LPJ_T0095741.1 MGP_LPJ_G0035576.1 mouse_genomes_project X 43607352 43635795 + MGP_LPJ_P0095741 Xpnpep2 protein_coding protein_coding MGP_LPJ_T0095742.1 MGP_LPJ_G0035576.1 mouse_genomes_project X 43607546 43632839 + MGP_LPJ_P0095742 Xpnpep2 protein_coding protein_coding MGP_LPJ_T0095743.1 MGP_LPJ_G0035576.1 mouse_genomes_project X 43607548 43610784 + Xpnpep2 protein_coding processed_transcript MGP_LPJ_T0095744.1 MGP_LPJ_G0035576.1 mouse_genomes_project X 43607556 43635484 + MGP_LPJ_P0095744 Xpnpep2 protein_coding protein_coding MGP_LPJ_T0095745.1 MGP_LPJ_G0035576.1 mouse_genomes_project X 43626569 43629975 + Xpnpep2 protein_coding processed_transcript MGP_LPJ_T0098719.1 MGP_LPJ_G0036982.1 mouse_genomes_project X 648637 706861 - Gm26618 sense_overlapping sense_overlapping MGP_LPJ_T0016816.1 MGP_LPJ_G0014907.1 mouse_genomes_project X 155801659 155801942 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016571.1 MGP_LPJ_G0014662.1 mouse_genomes_project X 103384519 103384711 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016210.1 MGP_LPJ_G0014301.1 mouse_genomes_project X 17399310 17399664 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097730.1 MGP_LPJ_G0036138.1 mouse_genomes_project X 162106755 162187432 + MGP_LPJ_P0097730 Ctps2 protein_coding protein_coding MGP_LPJ_T0097731.1 MGP_LPJ_G0036138.1 mouse_genomes_project X 162106762 162126882 + Ctps2 protein_coding processed_transcript MGP_LPJ_T0097732.1 MGP_LPJ_G0036138.1 mouse_genomes_project X 162106762 162126557 + Ctps2 protein_coding processed_transcript MGP_LPJ_T0097733.1 MGP_LPJ_G0036138.1 mouse_genomes_project X 162107122 162237836 + MGP_LPJ_P0097733 Ctps2 protein_coding protein_coding MGP_LPJ_T0097734.1 MGP_LPJ_G0036138.1 mouse_genomes_project X 162107149 162238019 + MGP_LPJ_P0097734 Ctps2 protein_coding protein_coding MGP_LPJ_T0097735.1 MGP_LPJ_G0036138.1 mouse_genomes_project X 162107286 162238012 + MGP_LPJ_P0097735 Ctps2 protein_coding protein_coding MGP_LPJ_T0097736.1 MGP_LPJ_G0036138.1 mouse_genomes_project X 162107302 162109088 + Ctps2 protein_coding processed_transcript MGP_LPJ_T0097737.1 MGP_LPJ_G0036138.1 mouse_genomes_project X 162107387 162237836 + MGP_LPJ_P0097737 Ctps2 protein_coding protein_coding MGP_LPJ_T0097738.1 MGP_LPJ_G0036138.1 mouse_genomes_project X 162107688 162127753 + Ctps2 protein_coding processed_transcript MGP_LPJ_T0097739.1 MGP_LPJ_G0036138.1 mouse_genomes_project X 162135011 162142068 + Ctps2 protein_coding processed_transcript MGP_LPJ_T0097740.1 MGP_LPJ_G0036138.1 mouse_genomes_project X 162146508 162184097 + Ctps2 protein_coding processed_transcript MGP_LPJ_T0097741.1 MGP_LPJ_G0036138.1 mouse_genomes_project X 162146889 162147179 + Ctps2 protein_coding processed_transcript MGP_LPJ_T0097742.1 MGP_LPJ_G0036138.1 mouse_genomes_project X 162146995 162240060 + MGP_LPJ_P0097742 Ctps2 protein_coding protein_coding MGP_LPJ_T0096601.1 MGP_LPJ_G0035815.1 mouse_genomes_project X 92746952 92767819 - MGP_LPJ_P0096601 Amer1 protein_coding protein_coding MGP_LPJ_T0016670.1 MGP_LPJ_G0014761.1 mouse_genomes_project X 127454346 127455132 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016313.1 MGP_LPJ_G0014404.1 mouse_genomes_project X 55990904 55994723 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097611.1 MGP_LPJ_G0036112.1 mouse_genomes_project X 156494140 156550220 - MGP_LPJ_P0097611 Sms protein_coding protein_coding MGP_LPJ_T0097612.1 MGP_LPJ_G0036112.1 mouse_genomes_project X 156495981 156549999 - MGP_LPJ_P0097612 Sms protein_coding nonsense_mediated_decay MGP_LPJ_T0097613.1 MGP_LPJ_G0036112.1 mouse_genomes_project X 156510491 156519145 - Sms protein_coding retained_intron MGP_LPJ_T0097614.1 MGP_LPJ_G0036112.1 mouse_genomes_project X 156517157 156549977 - Sms protein_coding retained_intron MGP_LPJ_T0097615.1 MGP_LPJ_G0036112.1 mouse_genomes_project X 156524147 156549305 - MGP_LPJ_P0097615 Sms protein_coding protein_coding MGP_LPJ_T0016583.1 MGP_LPJ_G0014674.1 mouse_genomes_project X 105021056 105021527 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097308.1 MGP_LPJ_G0036037.1 mouse_genomes_project X 139044593 139047731 - Tsc22d3 protein_coding processed_transcript MGP_LPJ_T0097309.1 MGP_LPJ_G0036037.1 mouse_genomes_project X 139044593 139048251 - MGP_LPJ_P0097309 Tsc22d3 protein_coding protein_coding MGP_LPJ_T0097310.1 MGP_LPJ_G0036037.1 mouse_genomes_project X 139044602 139048164 - Tsc22d3 protein_coding retained_intron MGP_LPJ_T0097311.1 MGP_LPJ_G0036037.1 mouse_genomes_project X 139045324 139107995 - MGP_LPJ_P0097311 Tsc22d3 protein_coding protein_coding MGP_LPJ_T0097312.1 MGP_LPJ_G0036037.1 mouse_genomes_project X 139045413 139053420 - MGP_LPJ_P0097312 Tsc22d3 protein_coding protein_coding MGP_LPJ_T0097313.1 MGP_LPJ_G0036037.1 mouse_genomes_project X 139048165 139053611 - Tsc22d3 protein_coding processed_transcript MGP_LPJ_T0016367.1 MGP_LPJ_G0014458.1 mouse_genomes_project X 66867891 66868416 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005639.1 MGP_LPJ_G0004750.1 mouse_genomes_project X 159597289 159609567 - Gm15241 antisense antisense MGP_LPJ_T0097187.1 MGP_LPJ_G0035998.1 mouse_genomes_project X 134461789 134465095 - MGP_LPJ_P0097187 Tceal8 protein_coding protein_coding MGP_LPJ_T0097188.1 MGP_LPJ_G0035998.1 mouse_genomes_project X 134462886 134465186 - MGP_LPJ_P0097188 Tceal8 protein_coding protein_coding MGP_LPJ_T0097189.1 MGP_LPJ_G0035998.1 mouse_genomes_project X 134463690 134465060 - MGP_LPJ_P0097189 Tceal8 protein_coding protein_coding MGP_LPJ_T0097190.1 MGP_LPJ_G0035998.1 mouse_genomes_project X 134463794 134465045 - MGP_LPJ_P0097190 Tceal8 protein_coding protein_coding MGP_LPJ_T0095381.1 MGP_LPJ_G0035456.1 mouse_genomes_project X 5679756 5681192 + Mid1ip1 protein_coding processed_transcript MGP_LPJ_T0095382.1 MGP_LPJ_G0035456.1 mouse_genomes_project X 5679762 5683128 + MGP_LPJ_P0095382 Mid1ip1 protein_coding protein_coding MGP_LPJ_T0095383.1 MGP_LPJ_G0035456.1 mouse_genomes_project X 5682133 5684434 + MGP_LPJ_P0095383 Mid1ip1 protein_coding protein_coding MGP_LPJ_T0095384.1 MGP_LPJ_G0035456.1 mouse_genomes_project X 5682133 5684434 + MGP_LPJ_P0095384 Mid1ip1 protein_coding protein_coding MGP_LPJ_T0095385.1 MGP_LPJ_G0035456.1 mouse_genomes_project X 5682211 5683128 + MGP_LPJ_P0095385 Mid1ip1 protein_coding protein_coding MGP_LPJ_T0095578.1 MGP_LPJ_G0035517.1 mouse_genomes_project X 32170855 32188127 - MGP_LPJ_P0095578 Nkrf protein_coding protein_coding MGP_LPJ_T0095983.1 MGP_LPJ_G0035663.1 mouse_genomes_project X 65769004 66265530 + MGP_LPJ_P0095983 Aff2 protein_coding protein_coding MGP_LPJ_T0095984.1 MGP_LPJ_G0035663.1 mouse_genomes_project X 65769215 65958033 + Aff2 protein_coding processed_transcript MGP_LPJ_T0095985.1 MGP_LPJ_G0035663.1 mouse_genomes_project X 65769410 66181883 + Aff2 protein_coding processed_transcript MGP_LPJ_T0095986.1 MGP_LPJ_G0035663.1 mouse_genomes_project X 66254170 66264269 + Aff2 protein_coding retained_intron MGP_LPJ_T0097197.1 MGP_LPJ_G0036003.1 mouse_genomes_project X 134538205 134540259 + MGP_LPJ_P0097197 Wbp5 protein_coding protein_coding MGP_LPJ_T0097198.1 MGP_LPJ_G0036003.1 mouse_genomes_project X 134538809 134540259 + MGP_LPJ_P0097198 Wbp5 protein_coding protein_coding MGP_LPJ_T0009384.1 MGP_LPJ_G0007536.1 mouse_genomes_project X 16381485 16396665 - 4930453H23Rik lincRNA lincRNA MGP_LPJ_T0009385.1 MGP_LPJ_G0007536.1 mouse_genomes_project X 16381962 16382220 - 4930453H23Rik lincRNA lincRNA MGP_LPJ_T0009386.1 MGP_LPJ_G0007536.1 mouse_genomes_project X 16393409 16396563 - 4930453H23Rik lincRNA lincRNA MGP_LPJ_T0097531.1 MGP_LPJ_G0036082.1 mouse_genomes_project X 150853648 150865316 - MGP_LPJ_P0097531 Ribc1 protein_coding protein_coding MGP_LPJ_T0097532.1 MGP_LPJ_G0036082.1 mouse_genomes_project X 150858597 150865291 - Ribc1 protein_coding processed_transcript MGP_LPJ_T0016384.1 MGP_LPJ_G0014475.1 mouse_genomes_project X 71113183 71113654 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095585.1 MGP_LPJ_G0035520.1 mouse_genomes_project X 32390992 32393875 - MGP_LPJ_P0095585 Rpl39 protein_coding protein_coding MGP_LPJ_T0095586.1 MGP_LPJ_G0035520.1 mouse_genomes_project X 32392115 32393639 - Rpl39 protein_coding retained_intron MGP_LPJ_T0095587.1 MGP_LPJ_G0035520.1 mouse_genomes_project X 32393009 32393629 - Rpl39 protein_coding retained_intron MGP_LPJ_T0096845.1 MGP_LPJ_G0035879.1 mouse_genomes_project X 100824432 100826897 - MGP_LPJ_P0096845 Nap1l2 protein_coding protein_coding MGP_LPJ_T0097178.1 MGP_LPJ_G0035993.1 mouse_genomes_project X 134161009 134166244 + MGP_LPJ_P0097178 Bhlhb9 protein_coding protein_coding MGP_LPJ_T0097179.1 MGP_LPJ_G0035993.1 mouse_genomes_project X 134161011 134166247 + MGP_LPJ_P0097179 Bhlhb9 protein_coding protein_coding MGP_LPJ_T0097180.1 MGP_LPJ_G0035993.1 mouse_genomes_project X 134161011 134164492 + MGP_LPJ_P0097180 Bhlhb9 protein_coding protein_coding MGP_LPJ_T0097181.1 MGP_LPJ_G0035993.1 mouse_genomes_project X 134161141 134162636 + Bhlhb9 protein_coding retained_intron MGP_LPJ_T0097038.1 MGP_LPJ_G0035948.1 mouse_genomes_project X 124061314 124061769 - MGP_LPJ_P0097038 protein_coding protein_coding MGP_LPJ_T0101449.1 MGP_LPJ_G0039610.1 mouse_genomes_project X 128455096 128455805 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0016306.1 MGP_LPJ_G0014397.1 mouse_genomes_project X 54338279 54338696 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016516.1 MGP_LPJ_G0014607.1 mouse_genomes_project X 95935529 95936015 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016773.1 MGP_LPJ_G0014864.1 mouse_genomes_project X 144572913 144573997 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095708.1 MGP_LPJ_G0035565.1 mouse_genomes_project X 37875221 37877055 + MGP_LPJ_P0095708 Gm43337 protein_coding protein_coding MGP_LPJ_T0097319.1 MGP_LPJ_G0036039.1 mouse_genomes_project X 139312744 139317871 - MGP_LPJ_P0097319 Tex13 protein_coding protein_coding MGP_LPJ_T0097320.1 MGP_LPJ_G0036039.1 mouse_genomes_project X 139313705 139315290 - Tex13 protein_coding retained_intron MGP_LPJ_T0098347.1 MGP_LPJ_G0036628.1 mouse_genomes_project X 16908373 16908452 + Gm25553 rRNA rRNA MGP_LPJ_T0016339.1 MGP_LPJ_G0014430.1 mouse_genomes_project X 60232626 60232979 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096973.1 MGP_LPJ_G0035925.1 mouse_genomes_project X 108919709 108920063 + MGP_LPJ_P0096973 Gm10112 protein_coding protein_coding MGP_LPJ_T0097248.1 MGP_LPJ_G0036020.1 mouse_genomes_project X 137340068 137444218 + MGP_LPJ_P0097248 Nrk protein_coding protein_coding MGP_LPJ_T0097249.1 MGP_LPJ_G0036020.1 mouse_genomes_project X 137340069 137401461 + Nrk protein_coding processed_transcript MGP_LPJ_T0097250.1 MGP_LPJ_G0036020.1 mouse_genomes_project X 137340069 137445658 + MGP_LPJ_P0097250 Nrk protein_coding protein_coding MGP_LPJ_T0097251.1 MGP_LPJ_G0036020.1 mouse_genomes_project X 137340069 137444930 + MGP_LPJ_P0097251 Nrk protein_coding nonsense_mediated_decay MGP_LPJ_T0097252.1 MGP_LPJ_G0036020.1 mouse_genomes_project X 137417808 137424869 + Nrk protein_coding retained_intron MGP_LPJ_T0097376.1 MGP_LPJ_G0036060.1 mouse_genomes_project X 142814939 142872247 + MGP_LPJ_P0097376 Alg13 protein_coding nonsense_mediated_decay MGP_LPJ_T0097377.1 MGP_LPJ_G0036060.1 mouse_genomes_project X 142814942 142820808 + MGP_LPJ_P0097377 Alg13 protein_coding protein_coding MGP_LPJ_T0097378.1 MGP_LPJ_G0036060.1 mouse_genomes_project X 142814942 142836606 + MGP_LPJ_P0097378 Alg13 protein_coding nonsense_mediated_decay MGP_LPJ_T0097379.1 MGP_LPJ_G0036060.1 mouse_genomes_project X 142814957 142872247 + MGP_LPJ_P0097379 Alg13 protein_coding nonsense_mediated_decay MGP_LPJ_T0097380.1 MGP_LPJ_G0036060.1 mouse_genomes_project X 142814962 142820679 + Alg13 protein_coding processed_transcript MGP_LPJ_T0097381.1 MGP_LPJ_G0036060.1 mouse_genomes_project X 142814962 142872252 + MGP_LPJ_P0097381 Alg13 protein_coding nonsense_mediated_decay MGP_LPJ_T0097382.1 MGP_LPJ_G0036060.1 mouse_genomes_project X 142814980 142820788 + MGP_LPJ_P0097382 Alg13 protein_coding protein_coding MGP_LPJ_T0097383.1 MGP_LPJ_G0036060.1 mouse_genomes_project X 142832709 142835869 + Alg13 protein_coding processed_transcript MGP_LPJ_T0097384.1 MGP_LPJ_G0036060.1 mouse_genomes_project X 142833334 142839820 + Alg13 protein_coding retained_intron MGP_LPJ_T0097385.1 MGP_LPJ_G0036060.1 mouse_genomes_project X 142834013 142871606 + MGP_LPJ_P0097385 Alg13 protein_coding unknown_likely_coding MGP_LPJ_T0097386.1 MGP_LPJ_G0036060.1 mouse_genomes_project X 142835872 142872252 + Alg13 protein_coding processed_transcript MGP_LPJ_T0097387.1 MGP_LPJ_G0036060.1 mouse_genomes_project X 142837307 142843044 + Alg13 protein_coding retained_intron MGP_LPJ_T0097388.1 MGP_LPJ_G0036060.1 mouse_genomes_project X 142844126 142872252 + Alg13 protein_coding processed_transcript MGP_LPJ_T0097389.1 MGP_LPJ_G0036060.1 mouse_genomes_project X 142853700 142867573 + Alg13 protein_coding processed_transcript MGP_LPJ_T0095361.1 MGP_LPJ_G0035449.1 mouse_genomes_project X 4773781 4774362 + MGP_LPJ_P0095361 Hypm protein_coding protein_coding MGP_LPJ_T0009461.1 MGP_LPJ_G0007585.1 mouse_genomes_project X 166338844 166353470 - Gm15232 lincRNA lincRNA MGP_LPJ_T0096667.1 MGP_LPJ_G0035833.1 mouse_genomes_project X 97275052 97303537 + MGP_LPJ_P0096667 Tmem28 protein_coding protein_coding MGP_LPJ_T0101195.1 MGP_LPJ_G0039458.1 mouse_genomes_project X 145499331 145499459 + Snora35 snoRNA snoRNA MGP_LPJ_T0016147.1 MGP_LPJ_G0014238.1 mouse_genomes_project X 2701259 2701430 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097609.1 MGP_LPJ_G0036111.1 mouse_genomes_project X 156205340 156465150 - MGP_LPJ_P0097609 Phex protein_coding protein_coding MGP_LPJ_T0097610.1 MGP_LPJ_G0036111.1 mouse_genomes_project X 156267063 156465706 - MGP_LPJ_P0097610 Phex protein_coding protein_coding MGP_LPJ_T0005593.1 MGP_LPJ_G0004717.1 mouse_genomes_project X 2265346 2269191 - Gm14703 antisense antisense MGP_LPJ_T0016522.1 MGP_LPJ_G0014613.1 mouse_genomes_project X 97746028 97747166 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016440.1 MGP_LPJ_G0014531.1 mouse_genomes_project X 82913095 82913609 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095340.1 MGP_LPJ_G0035436.1 mouse_genomes_project X 3259143 3306314 - MGP_LPJ_P0095340 protein_coding protein_coding MGP_LPJ_T0096708.1 MGP_LPJ_G0035845.1 mouse_genomes_project X 98210874 98268073 + MGP_LPJ_P0096708 Dlg3 protein_coding protein_coding MGP_LPJ_T0096709.1 MGP_LPJ_G0035845.1 mouse_genomes_project X 98210875 98268075 + MGP_LPJ_P0096709 Dlg3 protein_coding protein_coding MGP_LPJ_T0096710.1 MGP_LPJ_G0035845.1 mouse_genomes_project X 98210901 98268075 + MGP_LPJ_P0096710 Dlg3 protein_coding protein_coding MGP_LPJ_T0096711.1 MGP_LPJ_G0035845.1 mouse_genomes_project X 98211147 98268077 + Dlg3 protein_coding retained_intron MGP_LPJ_T0096712.1 MGP_LPJ_G0035845.1 mouse_genomes_project X 98217887 98268075 + MGP_LPJ_P0096712 Dlg3 protein_coding protein_coding MGP_LPJ_T0096713.1 MGP_LPJ_G0035845.1 mouse_genomes_project X 98220382 98268075 + Dlg3 protein_coding processed_transcript MGP_LPJ_T0096714.1 MGP_LPJ_G0035845.1 mouse_genomes_project X 98241181 98256280 + Dlg3 protein_coding processed_transcript MGP_LPJ_T0096715.1 MGP_LPJ_G0035845.1 mouse_genomes_project X 98257666 98264497 + Dlg3 protein_coding processed_transcript MGP_LPJ_T0097778.1 MGP_LPJ_G0036151.1 mouse_genomes_project X 163640628 163654748 + MGP_LPJ_P0097778 Piga protein_coding nonsense_mediated_decay MGP_LPJ_T0097779.1 MGP_LPJ_G0036151.1 mouse_genomes_project X 163640628 163654743 + MGP_LPJ_P0097779 Piga protein_coding protein_coding MGP_LPJ_T0097780.1 MGP_LPJ_G0036151.1 mouse_genomes_project X 163640653 163654741 + MGP_LPJ_P0097780 Piga protein_coding nonsense_mediated_decay MGP_LPJ_T0097781.1 MGP_LPJ_G0036151.1 mouse_genomes_project X 163640744 163654745 + MGP_LPJ_P0097781 Piga protein_coding protein_coding MGP_LPJ_T0097782.1 MGP_LPJ_G0036151.1 mouse_genomes_project X 163643421 163652810 + MGP_LPJ_P0097782 Piga protein_coding protein_coding MGP_LPJ_T0097783.1 MGP_LPJ_G0036151.1 mouse_genomes_project X 163646351 163652897 + Piga protein_coding retained_intron MGP_LPJ_T0102494.1 MGP_LPJ_G0040530.1 mouse_genomes_project X 71361733 71362600 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0101194.1 MGP_LPJ_G0039457.1 mouse_genomes_project X 141913353 141913482 + Gm23325 snoRNA snoRNA MGP_LPJ_T0016383.1 MGP_LPJ_G0014474.1 mouse_genomes_project X 71113120 71113705 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016305.1 MGP_LPJ_G0014396.1 mouse_genomes_project X 54137393 54138073 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016398.1 MGP_LPJ_G0014489.1 mouse_genomes_project X 73471324 73472497 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096906.1 MGP_LPJ_G0035900.1 mouse_genomes_project X 103765089 103877807 + MGP_LPJ_P0096906 Atp7a protein_coding protein_coding MGP_LPJ_T0096907.1 MGP_LPJ_G0035900.1 mouse_genomes_project X 103765135 103877813 + MGP_LPJ_P0096907 Atp7a protein_coding protein_coding MGP_LPJ_T0096908.1 MGP_LPJ_G0035900.1 mouse_genomes_project X 103858282 103870167 + Atp7a protein_coding processed_transcript MGP_LPJ_T0096909.1 MGP_LPJ_G0035900.1 mouse_genomes_project X 103867095 103875292 + Atp7a protein_coding retained_intron MGP_LPJ_T0016534.1 MGP_LPJ_G0014625.1 mouse_genomes_project X 99677759 99678223 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097533.1 MGP_LPJ_G0036083.1 mouse_genomes_project X 150865448 150884581 + MGP_LPJ_P0097533 Smc1a protein_coding nonsense_mediated_decay MGP_LPJ_T0097534.1 MGP_LPJ_G0036083.1 mouse_genomes_project X 150865448 150913093 + MGP_LPJ_P0097534 Smc1a protein_coding protein_coding MGP_LPJ_T0097535.1 MGP_LPJ_G0036083.1 mouse_genomes_project X 150884815 150886427 + Smc1a protein_coding retained_intron MGP_LPJ_T0097536.1 MGP_LPJ_G0036083.1 mouse_genomes_project X 150897066 150898374 + Smc1a protein_coding retained_intron MGP_LPJ_T0097537.1 MGP_LPJ_G0036083.1 mouse_genomes_project X 150908865 150909907 + Smc1a protein_coding retained_intron MGP_LPJ_T0097538.1 MGP_LPJ_G0036083.1 mouse_genomes_project X 150909473 150910179 + Smc1a protein_coding retained_intron MGP_LPJ_T0016643.1 MGP_LPJ_G0014734.1 mouse_genomes_project X 117109361 117110099 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016187.1 MGP_LPJ_G0014278.1 mouse_genomes_project X 11511671 11511923 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016217.1 MGP_LPJ_G0014308.1 mouse_genomes_project X 26889009 26889585 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101207.1 MGP_LPJ_G0039470.1 mouse_genomes_project X 166607796 166607914 - Gm26368 snoRNA snoRNA MGP_LPJ_T0097745.1 MGP_LPJ_G0036141.1 mouse_genomes_project X 162984596 162985787 - MGP_LPJ_P0097745 Rnf138rt1 protein_coding protein_coding MGP_LPJ_T0097258.1 MGP_LPJ_G0036024.1 mouse_genomes_project X 137653671 137683697 + MGP_LPJ_P0097258 Mum1l1 protein_coding protein_coding MGP_LPJ_T0097259.1 MGP_LPJ_G0036024.1 mouse_genomes_project X 137653671 137687055 + MGP_LPJ_P0097259 Mum1l1 protein_coding protein_coding MGP_LPJ_T0097260.1 MGP_LPJ_G0036024.1 mouse_genomes_project X 137653673 137687057 + MGP_LPJ_P0097260 Mum1l1 protein_coding protein_coding MGP_LPJ_T0097261.1 MGP_LPJ_G0036024.1 mouse_genomes_project X 137653737 137656915 + Mum1l1 protein_coding retained_intron MGP_LPJ_T0097262.1 MGP_LPJ_G0036024.1 mouse_genomes_project X 137660795 137687057 + MGP_LPJ_P0097262 Mum1l1 protein_coding protein_coding MGP_LPJ_T0097263.1 MGP_LPJ_G0036024.1 mouse_genomes_project X 137660795 137687057 + MGP_LPJ_P0097263 Mum1l1 protein_coding protein_coding MGP_LPJ_T0097264.1 MGP_LPJ_G0036024.1 mouse_genomes_project X 137660795 137683524 + MGP_LPJ_P0097264 Mum1l1 protein_coding protein_coding MGP_LPJ_T0097265.1 MGP_LPJ_G0036024.1 mouse_genomes_project X 137660795 137683763 + MGP_LPJ_P0097265 Mum1l1 protein_coding protein_coding MGP_LPJ_T0098359.1 MGP_LPJ_G0036640.1 mouse_genomes_project X 154539180 154539299 + n-R5s16 rRNA rRNA MGP_LPJ_T0016640.1 MGP_LPJ_G0014731.1 mouse_genomes_project X 115881059 115881410 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016471.1 MGP_LPJ_G0014562.1 mouse_genomes_project X 88619236 88619624 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096450.1 MGP_LPJ_G0035762.1 mouse_genomes_project X 73126828 73131455 + MGP_LPJ_P0096450 Cldn34b4 protein_coding protein_coding MGP_LPJ_T0096451.1 MGP_LPJ_G0035762.1 mouse_genomes_project X 73126930 73131364 + MGP_LPJ_P0096451 Cldn34b4 protein_coding protein_coding MGP_LPJ_T0016475.1 MGP_LPJ_G0014566.1 mouse_genomes_project X 89135698 89136360 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101196.1 MGP_LPJ_G0039459.1 mouse_genomes_project X 146008402 146008531 - Gm25107 snoRNA snoRNA MGP_LPJ_T0016702.1 MGP_LPJ_G0014793.1 mouse_genomes_project X 134868728 134869808 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002501.1 MGP_LPJ_G0002407.1 mouse_genomes_project X 37529623 37531859 - TEC TEC MGP_LPJ_T0016811.1 MGP_LPJ_G0014902.1 mouse_genomes_project X 154499466 154500234 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016590.1 MGP_LPJ_G0014681.1 mouse_genomes_project X 106749072 106749228 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009380.1 MGP_LPJ_G0007533.1 mouse_genomes_project X 9924617 9962828 + Gm14505 lincRNA lincRNA MGP_LPJ_T0096952.1 MGP_LPJ_G0035915.1 mouse_genomes_project X 105600936 105689794 + MGP_LPJ_P0096952 Fam46d protein_coding protein_coding MGP_LPJ_T0096953.1 MGP_LPJ_G0035915.1 mouse_genomes_project X 105624804 105687444 + MGP_LPJ_P0096953 Fam46d protein_coding protein_coding MGP_LPJ_T0096954.1 MGP_LPJ_G0035915.1 mouse_genomes_project X 105624899 105689794 + MGP_LPJ_P0096954 Fam46d protein_coding protein_coding MGP_LPJ_T0096955.1 MGP_LPJ_G0035915.1 mouse_genomes_project X 105624899 105687285 + MGP_LPJ_P0096955 Fam46d protein_coding protein_coding MGP_LPJ_T0016652.1 MGP_LPJ_G0014743.1 mouse_genomes_project X 119144988 119146426 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096927.1 MGP_LPJ_G0035908.1 mouse_genomes_project X 104684769 104698011 + MGP_LPJ_P0096927 Lpar4 protein_coding protein_coding MGP_LPJ_T0095527.1 MGP_LPJ_G0035498.1 mouse_genomes_project X 16350288 16351459 - MGP_LPJ_P0095527 Gm21876 protein_coding protein_coding MGP_LPJ_T0101193.1 MGP_LPJ_G0039456.1 mouse_genomes_project X 140965776 140965902 - Gm25915 snoRNA snoRNA MGP_LPJ_T0097594.1 MGP_LPJ_G0036105.1 mouse_genomes_project X 154139496 154141207 + MGP_LPJ_P0097594 protein_coding protein_coding MGP_LPJ_T0097164.1 MGP_LPJ_G0035987.1 mouse_genomes_project X 133859104 133877301 - MGP_LPJ_P0097164 Prame protein_coding protein_coding MGP_LPJ_T0097165.1 MGP_LPJ_G0035987.1 mouse_genomes_project X 133859246 133861908 - MGP_LPJ_P0097165 Prame protein_coding protein_coding MGP_LPJ_T0096021.1 MGP_LPJ_G0035673.1 mouse_genomes_project X 67911845 67988644 - MGP_LPJ_P0096021 Cd99l2 protein_coding protein_coding MGP_LPJ_T0096022.1 MGP_LPJ_G0035673.1 mouse_genomes_project X 67911845 67988440 - MGP_LPJ_P0096022 Cd99l2 protein_coding protein_coding MGP_LPJ_T0096023.1 MGP_LPJ_G0035673.1 mouse_genomes_project X 67911845 67988644 - MGP_LPJ_P0096023 Cd99l2 protein_coding protein_coding MGP_LPJ_T0096024.1 MGP_LPJ_G0035673.1 mouse_genomes_project X 67914407 67988644 - MGP_LPJ_P0096024 Cd99l2 protein_coding protein_coding MGP_LPJ_T0096025.1 MGP_LPJ_G0035673.1 mouse_genomes_project X 67931110 67988444 - Cd99l2 protein_coding retained_intron MGP_LPJ_T0096026.1 MGP_LPJ_G0035673.1 mouse_genomes_project X 67987693 67988400 - Cd99l2 protein_coding processed_transcript MGP_LPJ_T0016143.1 MGP_LPJ_G0014234.1 mouse_genomes_project X 2600570 2601283 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018560.1 MGP_LPJ_G0015691.1 mouse_genomes_project X 8072331 8075520 + 5730405O15Rik processed_transcript processed_transcript MGP_LPJ_T0018561.1 MGP_LPJ_G0015691.1 mouse_genomes_project X 8072367 8075607 + 5730405O15Rik processed_transcript processed_transcript MGP_LPJ_T0011202.1 MGP_LPJ_G0009320.1 mouse_genomes_project X 70851972 70852051 - Mir7091 miRNA miRNA MGP_LPJ_T0016546.1 MGP_LPJ_G0014637.1 mouse_genomes_project X 100930089 100931893 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018594.1 MGP_LPJ_G0015703.1 mouse_genomes_project X 98757847 98783539 + Gm21986 processed_transcript processed_transcript MGP_LPJ_T0016827.1 MGP_LPJ_G0014918.1 mouse_genomes_project X 157195885 157196969 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016461.1 MGP_LPJ_G0014552.1 mouse_genomes_project X 86792861 86796500 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097176.1 MGP_LPJ_G0035992.1 mouse_genomes_project X 134108519 134113276 + MGP_LPJ_P0097176 Gprasp2 protein_coding protein_coding MGP_LPJ_T0097177.1 MGP_LPJ_G0035992.1 mouse_genomes_project X 134108551 134113272 + MGP_LPJ_P0097177 Gprasp2 protein_coding protein_coding MGP_LPJ_T0096064.1 MGP_LPJ_G0035690.1 mouse_genomes_project X 69616922 69619968 + MGP_LPJ_P0096064 Pnma3 protein_coding protein_coding MGP_LPJ_T0011172.1 MGP_LPJ_G0009290.1 mouse_genomes_project X 56348923 56349013 - Mir505 miRNA miRNA MGP_LPJ_T0016402.1 MGP_LPJ_G0014493.1 mouse_genomes_project X 73999459 73999987 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096455.1 MGP_LPJ_G0035765.1 mouse_genomes_project X 74474084 74510038 - MGP_LPJ_P0096455 Prkx protein_coding protein_coding MGP_LPJ_T0096456.1 MGP_LPJ_G0035765.1 mouse_genomes_project X 74484128 74509734 - MGP_LPJ_P0096456 Prkx protein_coding protein_coding MGP_LPJ_T0016484.1 MGP_LPJ_G0014575.1 mouse_genomes_project X 91157569 91158071 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016672.1 MGP_LPJ_G0014763.1 mouse_genomes_project X 128322924 128324184 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096107.1 MGP_LPJ_G0035705.1 mouse_genomes_project X 70272496 70295919 + MGP_LPJ_P0096107 Abcd1 protein_coding protein_coding MGP_LPJ_T0096108.1 MGP_LPJ_G0035705.1 mouse_genomes_project X 70272639 70287341 + MGP_LPJ_P0096108 Abcd1 protein_coding protein_coding MGP_LPJ_T0011229.1 MGP_LPJ_G0009347.1 mouse_genomes_project X 141447010 141447105 - Gm44351 miRNA miRNA MGP_LPJ_T0016680.1 MGP_LPJ_G0014771.1 mouse_genomes_project X 130143955 130144857 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102530.1 MGP_LPJ_G0040566.1 mouse_genomes_project X 159403364 159403657 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0097169.1 MGP_LPJ_G0035990.1 mouse_genomes_project X 134004641 134023574 + Gprasp1 protein_coding processed_transcript MGP_LPJ_T0097171.1 MGP_LPJ_G0035990.1 mouse_genomes_project X 134004641 134064167 + MGP_LPJ_P0097171 Gprasp1 protein_coding protein_coding MGP_LPJ_T0097172.1 MGP_LPJ_G0035990.1 mouse_genomes_project X 134004641 134064167 + MGP_LPJ_P0097172 Gprasp1 protein_coding protein_coding MGP_LPJ_T0097173.1 MGP_LPJ_G0035990.1 mouse_genomes_project X 134004641 134064167 + MGP_LPJ_P0097173 Gprasp1 protein_coding protein_coding MGP_LPJ_T0097174.1 MGP_LPJ_G0035990.1 mouse_genomes_project X 134004643 134042889 + Gprasp1 protein_coding processed_transcript MGP_LPJ_T0016728.1 MGP_LPJ_G0014819.1 mouse_genomes_project X 138571856 138572837 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097546.1 MGP_LPJ_G0036085.1 mouse_genomes_project X 151093887 151137712 + MGP_LPJ_P0097546 Kdm5c protein_coding protein_coding MGP_LPJ_T0097547.1 MGP_LPJ_G0036085.1 mouse_genomes_project X 151094096 151138478 + MGP_LPJ_P0097547 Kdm5c protein_coding protein_coding MGP_LPJ_T0097548.1 MGP_LPJ_G0036085.1 mouse_genomes_project X 151094121 151108180 + Kdm5c protein_coding retained_intron MGP_LPJ_T0097549.1 MGP_LPJ_G0036085.1 mouse_genomes_project X 151094139 151137716 + MGP_LPJ_P0097549 Kdm5c protein_coding protein_coding MGP_LPJ_T0097550.1 MGP_LPJ_G0036085.1 mouse_genomes_project X 151133749 151135500 + MGP_LPJ_P0097550 Kdm5c protein_coding protein_coding MGP_LPJ_T0097551.1 MGP_LPJ_G0036085.1 mouse_genomes_project X 151135856 151137340 + MGP_LPJ_P0097551 Kdm5c protein_coding protein_coding MGP_LPJ_T0095629.1 MGP_LPJ_G0035544.1 mouse_genomes_project X 33210490 33212876 - MGP_LPJ_P0095629 protein_coding protein_coding MGP_LPJ_T0016737.1 MGP_LPJ_G0014828.1 mouse_genomes_project X 140087892 140088192 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095145.1 MGP_LPJ_G0035394.1 mouse_genomes_project X 1660462 1671975 + MGP_LPJ_P0095145 Akap4 protein_coding protein_coding MGP_LPJ_T0095146.1 MGP_LPJ_G0035394.1 mouse_genomes_project X 1660463 1671970 + MGP_LPJ_P0095146 Akap4 protein_coding protein_coding MGP_LPJ_T0095147.1 MGP_LPJ_G0035394.1 mouse_genomes_project X 1661156 1671957 + MGP_LPJ_P0095147 Akap4 protein_coding protein_coding MGP_LPJ_T0016444.1 MGP_LPJ_G0014535.1 mouse_genomes_project X 84612413 84613291 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095867.1 MGP_LPJ_G0035623.1 mouse_genomes_project X 52248856 52251516 + MGP_LPJ_P0095867 Smim10l2a protein_coding protein_coding MGP_LPJ_T0016629.1 MGP_LPJ_G0014720.1 mouse_genomes_project X 114630341 114630731 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096532.1 MGP_LPJ_G0035797.1 mouse_genomes_project X 89627091 89627824 + MGP_LPJ_P0096532 Gm5941 protein_coding protein_coding MGP_LPJ_T0102508.1 MGP_LPJ_G0040544.1 mouse_genomes_project X 89226635 89227679 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0016775.1 MGP_LPJ_G0014866.1 mouse_genomes_project X 145018687 145019161 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095432.1 MGP_LPJ_G0035468.1 mouse_genomes_project X 11753525 11756270 + MGP_LPJ_P0095432 protein_coding protein_coding MGP_LPJ_T0018639.1 MGP_LPJ_G0015715.1 mouse_genomes_project X 151911932 151951714 + 9530051G07Rik processed_transcript processed_transcript MGP_LPJ_T0096410.1 MGP_LPJ_G0035747.1 mouse_genomes_project X 71790984 71808686 - MGP_LPJ_P0096410 Smim9 protein_coding protein_coding MGP_LPJ_T0096411.1 MGP_LPJ_G0035747.1 mouse_genomes_project X 71791162 71806553 - MGP_LPJ_P0096411 Smim9 protein_coding protein_coding MGP_LPJ_T0096412.1 MGP_LPJ_G0035747.1 mouse_genomes_project X 71794053 71808703 - Smim9 protein_coding processed_transcript MGP_LPJ_T0096812.1 MGP_LPJ_G0035867.1 mouse_genomes_project X 99639661 99654639 - MGP_LPJ_P0096812 Ercc6l protein_coding protein_coding MGP_LPJ_T0016857.1 MGP_LPJ_G0014948.1 mouse_genomes_project X 162697798 162699283 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099895.1 MGP_LPJ_G0038158.1 mouse_genomes_project X 52641949 52642055 + Gm23258 snRNA snRNA MGP_LPJ_T0009409.1 MGP_LPJ_G0007554.1 mouse_genomes_project X 90296691 90297411 + BC061195 lincRNA lincRNA MGP_LPJ_T0097570.1 MGP_LPJ_G0036092.1 mouse_genomes_project X 151910469 151911879 - MGP_LPJ_P0097570 Mageh1 protein_coding protein_coding MGP_LPJ_T0011195.1 MGP_LPJ_G0009313.1 mouse_genomes_project X 68784111 68784193 - Mir224 miRNA miRNA MGP_LPJ_T0095288.1 MGP_LPJ_G0035423.1 mouse_genomes_project X 2656981 2671788 - MGP_LPJ_P0095288 Glod5 protein_coding protein_coding MGP_LPJ_T0016642.1 MGP_LPJ_G0014733.1 mouse_genomes_project X 116414961 116416070 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016603.1 MGP_LPJ_G0014694.1 mouse_genomes_project X 110095402 110096925 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097105.1 MGP_LPJ_G0035971.1 mouse_genomes_project X 132601514 132649406 - MGP_LPJ_P0097105 Btk protein_coding protein_coding MGP_LPJ_T0097106.1 MGP_LPJ_G0035971.1 mouse_genomes_project X 132601548 132649394 - MGP_LPJ_P0097106 Btk protein_coding protein_coding MGP_LPJ_T0097107.1 MGP_LPJ_G0035971.1 mouse_genomes_project X 132608404 132649406 - Btk protein_coding retained_intron MGP_LPJ_T0097108.1 MGP_LPJ_G0035971.1 mouse_genomes_project X 132628024 132648739 - Btk protein_coding processed_transcript MGP_LPJ_T0097109.1 MGP_LPJ_G0035971.1 mouse_genomes_project X 132638254 132649835 - Btk protein_coding processed_transcript MGP_LPJ_T0011800.1 MGP_LPJ_G0009918.1 mouse_genomes_project X 162280421 162280677 - Gm23501 misc_RNA misc_RNA MGP_LPJ_T0009418.1 MGP_LPJ_G0007561.1 mouse_genomes_project X 101161294 101174194 + Jpx lincRNA lincRNA MGP_LPJ_T0009419.1 MGP_LPJ_G0007561.1 mouse_genomes_project X 101161313 101162357 + Jpx lincRNA lincRNA MGP_LPJ_T0009420.1 MGP_LPJ_G0007561.1 mouse_genomes_project X 101161506 101171011 + Jpx lincRNA lincRNA MGP_LPJ_T0009421.1 MGP_LPJ_G0007561.1 mouse_genomes_project X 101161531 101170732 + Jpx lincRNA lincRNA MGP_LPJ_T0095598.1 MGP_LPJ_G0035528.1 mouse_genomes_project X 32599320 32605788 + MGP_LPJ_P0095598 Rhox2b protein_coding protein_coding MGP_LPJ_T0096730.1 MGP_LPJ_G0035849.1 mouse_genomes_project X 98715129 98721475 + MGP_LPJ_P0096730 Foxo4 protein_coding protein_coding MGP_LPJ_T0096731.1 MGP_LPJ_G0035849.1 mouse_genomes_project X 98715168 98717037 + Foxo4 protein_coding processed_transcript MGP_LPJ_T0096732.1 MGP_LPJ_G0035849.1 mouse_genomes_project X 98715422 98719835 + MGP_LPJ_P0096732 Foxo4 protein_coding protein_coding MGP_LPJ_T0005613.1 MGP_LPJ_G0004731.1 mouse_genomes_project X 65765290 65769980 - Gm14705 antisense antisense MGP_LPJ_T0005614.1 MGP_LPJ_G0004731.1 mouse_genomes_project X 65766652 65769052 - Gm14705 antisense antisense MGP_LPJ_T0096869.1 MGP_LPJ_G0035894.1 mouse_genomes_project X 102827926 102831476 + MGP_LPJ_P0096869 Magee1 protein_coding protein_coding MGP_LPJ_T0016371.1 MGP_LPJ_G0014462.1 mouse_genomes_project X 67102127 67102470 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095665.1 MGP_LPJ_G0035560.1 mouse_genomes_project X 34707092 34710300 + MGP_LPJ_P0095665 Cypt15 protein_coding protein_coding MGP_LPJ_T0095801.1 MGP_LPJ_G0035591.1 mouse_genomes_project X 45218656 45219616 + MGP_LPJ_P0095801 Olfr1320 protein_coding protein_coding MGP_LPJ_T0018613.1 MGP_LPJ_G0015706.1 mouse_genomes_project X 106688167 106744975 + processed_transcript processed_transcript MGP_LPJ_T0018614.1 MGP_LPJ_G0015706.1 mouse_genomes_project X 106688191 106744769 + processed_transcript processed_transcript MGP_LPJ_T0018615.1 MGP_LPJ_G0015706.1 mouse_genomes_project X 106688267 106832182 + processed_transcript processed_transcript MGP_LPJ_T0018616.1 MGP_LPJ_G0015706.1 mouse_genomes_project X 106688346 106744762 + processed_transcript processed_transcript MGP_LPJ_T0018617.1 MGP_LPJ_G0015706.1 mouse_genomes_project X 106688353 106693186 + processed_transcript retained_intron MGP_LPJ_T0018618.1 MGP_LPJ_G0015706.1 mouse_genomes_project X 106688368 106730153 + processed_transcript processed_transcript MGP_LPJ_T0018619.1 MGP_LPJ_G0015706.1 mouse_genomes_project X 106688384 106730357 + processed_transcript processed_transcript MGP_LPJ_T0018620.1 MGP_LPJ_G0015706.1 mouse_genomes_project X 106758570 106832690 + processed_transcript processed_transcript MGP_LPJ_T0102480.1 MGP_LPJ_G0040516.1 mouse_genomes_project X 8207258 8207396 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0102477.1 MGP_LPJ_G0040513.1 mouse_genomes_project X 3980674 3981187 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0016588.1 MGP_LPJ_G0014679.1 mouse_genomes_project X 105900284 105905107 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016248.1 MGP_LPJ_G0014339.1 mouse_genomes_project X 37288586 37289252 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097797.1 MGP_LPJ_G0036155.1 mouse_genomes_project X 164217478 164235285 + MGP_LPJ_P0097797 Fancb protein_coding protein_coding MGP_LPJ_T0097798.1 MGP_LPJ_G0036155.1 mouse_genomes_project X 164217478 164235285 + MGP_LPJ_P0097798 Fancb protein_coding protein_coding MGP_LPJ_T0097799.1 MGP_LPJ_G0036155.1 mouse_genomes_project X 164217598 164235288 + MGP_LPJ_P0097799 Fancb protein_coding protein_coding MGP_LPJ_T0016791.1 MGP_LPJ_G0014882.1 mouse_genomes_project X 150593449 150593626 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016275.1 MGP_LPJ_G0014366.1 mouse_genomes_project X 44699015 44699364 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016804.1 MGP_LPJ_G0014895.1 mouse_genomes_project X 153370517 153371164 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102515.1 MGP_LPJ_G0040551.1 mouse_genomes_project X 100511252 100511989 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0016272.1 MGP_LPJ_G0014363.1 mouse_genomes_project X 43212248 43215585 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096118.1 MGP_LPJ_G0035708.1 mouse_genomes_project X 70336827 70344762 - Idh3g protein_coding retained_intron MGP_LPJ_T0096119.1 MGP_LPJ_G0035708.1 mouse_genomes_project X 70336827 70344762 - MGP_LPJ_P0096119 Idh3g protein_coding protein_coding MGP_LPJ_T0096120.1 MGP_LPJ_G0035708.1 mouse_genomes_project X 70336907 70338762 - Idh3g protein_coding retained_intron MGP_LPJ_T0096121.1 MGP_LPJ_G0035708.1 mouse_genomes_project X 70337534 70338561 - Idh3g protein_coding retained_intron MGP_LPJ_T0096122.1 MGP_LPJ_G0035708.1 mouse_genomes_project X 70337900 70338677 - Idh3g protein_coding retained_intron MGP_LPJ_T0096123.1 MGP_LPJ_G0035708.1 mouse_genomes_project X 70337938 70344487 - Idh3g protein_coding processed_transcript MGP_LPJ_T0096124.1 MGP_LPJ_G0035708.1 mouse_genomes_project X 70338285 70339572 - Idh3g protein_coding retained_intron MGP_LPJ_T0096125.1 MGP_LPJ_G0035708.1 mouse_genomes_project X 70338452 70340084 - Idh3g protein_coding retained_intron MGP_LPJ_T0096126.1 MGP_LPJ_G0035708.1 mouse_genomes_project X 70338843 70340233 - Idh3g protein_coding processed_transcript MGP_LPJ_T0095346.1 MGP_LPJ_G0035441.1 mouse_genomes_project X 3703206 3705816 + MGP_LPJ_P0095346 B630019K06Rik protein_coding protein_coding MGP_LPJ_T0016528.1 MGP_LPJ_G0014619.1 mouse_genomes_project X 98948741 98948953 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011772.1 MGP_LPJ_G0009890.1 mouse_genomes_project X 65084355 65084411 + Gm27979 misc_RNA misc_RNA MGP_LPJ_T0096448.1 MGP_LPJ_G0035760.1 mouse_genomes_project X 73063624 73075513 + MGP_LPJ_P0096448 protein_coding protein_coding MGP_LPJ_T0095954.1 MGP_LPJ_G0035651.1 mouse_genomes_project X 58515549 58516371 + MGP_LPJ_P0095954 4931400O07Rik protein_coding protein_coding MGP_LPJ_T0099873.1 MGP_LPJ_G0038136.1 mouse_genomes_project X 4245224 4245382 + Gm25728 snRNA snRNA MGP_LPJ_T0016510.1 MGP_LPJ_G0014601.1 mouse_genomes_project X 94357706 94358098 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016633.1 MGP_LPJ_G0014724.1 mouse_genomes_project X 115380659 115381648 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102499.1 MGP_LPJ_G0040535.1 mouse_genomes_project X 74443959 74448037 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0016843.1 MGP_LPJ_G0014934.1 mouse_genomes_project X 159824572 159824855 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095855.1 MGP_LPJ_G0035613.1 mouse_genomes_project X 49017834 49027137 + MGP_LPJ_P0095855 Etd protein_coding protein_coding MGP_LPJ_T0016179.1 MGP_LPJ_G0014270.1 mouse_genomes_project X 8526458 8526994 - processed_pseudogene processed_pseudogene MGP_LPJ_T0096077.1 MGP_LPJ_G0035699.1 mouse_genomes_project X 70036020 70045191 + Bgn protein_coding processed_transcript MGP_LPJ_T0096078.1 MGP_LPJ_G0035699.1 mouse_genomes_project X 70036020 70048157 + MGP_LPJ_P0096078 Bgn protein_coding protein_coding MGP_LPJ_T0096079.1 MGP_LPJ_G0035699.1 mouse_genomes_project X 70036041 70044843 + Bgn protein_coding retained_intron MGP_LPJ_T0096080.1 MGP_LPJ_G0035699.1 mouse_genomes_project X 70036051 70038717 + Bgn protein_coding retained_intron MGP_LPJ_T0096081.1 MGP_LPJ_G0035699.1 mouse_genomes_project X 70036053 70048153 + MGP_LPJ_P0096081 Bgn protein_coding protein_coding MGP_LPJ_T0096082.1 MGP_LPJ_G0035699.1 mouse_genomes_project X 70036057 70044827 + Bgn protein_coding retained_intron MGP_LPJ_T0096083.1 MGP_LPJ_G0035699.1 mouse_genomes_project X 70044501 70045755 + Bgn protein_coding processed_transcript MGP_LPJ_T0096084.1 MGP_LPJ_G0035699.1 mouse_genomes_project X 70047129 70048150 + Bgn protein_coding processed_transcript MGP_LPJ_T0016703.1 MGP_LPJ_G0014794.1 mouse_genomes_project X 134868731 134875280 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096174.1 MGP_LPJ_G0035714.1 mouse_genomes_project X 70480046 70483036 - Naa10 protein_coding processed_transcript MGP_LPJ_T0096175.1 MGP_LPJ_G0035714.1 mouse_genomes_project X 70480046 70485128 - MGP_LPJ_P0096175 Naa10 protein_coding protein_coding MGP_LPJ_T0096176.1 MGP_LPJ_G0035714.1 mouse_genomes_project X 70480069 70485068 - MGP_LPJ_P0096176 Naa10 protein_coding protein_coding MGP_LPJ_T0096177.1 MGP_LPJ_G0035714.1 mouse_genomes_project X 70480093 70485016 - MGP_LPJ_P0096177 Naa10 protein_coding protein_coding MGP_LPJ_T0096178.1 MGP_LPJ_G0035714.1 mouse_genomes_project X 70480253 70484960 - MGP_LPJ_P0096178 Naa10 protein_coding protein_coding MGP_LPJ_T0096179.1 MGP_LPJ_G0035714.1 mouse_genomes_project X 70480265 70483081 - Naa10 protein_coding processed_transcript MGP_LPJ_T0096180.1 MGP_LPJ_G0035714.1 mouse_genomes_project X 70480647 70485012 - MGP_LPJ_P0096180 Naa10 protein_coding protein_coding MGP_LPJ_T0096181.1 MGP_LPJ_G0035714.1 mouse_genomes_project X 70481034 70483639 - Naa10 protein_coding retained_intron MGP_LPJ_T0096182.1 MGP_LPJ_G0035714.1 mouse_genomes_project X 70481242 70485090 - Naa10 protein_coding retained_intron MGP_LPJ_T0096183.1 MGP_LPJ_G0035714.1 mouse_genomes_project X 70484160 70485039 - Naa10 protein_coding retained_intron MGP_LPJ_T0096184.1 MGP_LPJ_G0035714.1 mouse_genomes_project X 70484296 70485036 - Naa10 protein_coding retained_intron MGP_LPJ_T0096847.1 MGP_LPJ_G0035881.1 mouse_genomes_project X 100973927 100983121 + MGP_LPJ_P0096847 Cdx4 protein_coding protein_coding MGP_LPJ_T0096089.1 MGP_LPJ_G0035701.1 mouse_genomes_project X 70192608 70196710 + MGP_LPJ_P0096089 Dusp9 protein_coding protein_coding MGP_LPJ_T0016317.1 MGP_LPJ_G0014408.1 mouse_genomes_project X 56575910 56576352 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016671.1 MGP_LPJ_G0014762.1 mouse_genomes_project X 127525322 127525645 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095868.1 MGP_LPJ_G0035624.1 mouse_genomes_project X 52337549 52392681 + Ddx26b protein_coding processed_transcript MGP_LPJ_T0095869.1 MGP_LPJ_G0035624.1 mouse_genomes_project X 52337569 52392680 + MGP_LPJ_P0095869 Ddx26b protein_coding protein_coding MGP_LPJ_T0095870.1 MGP_LPJ_G0035624.1 mouse_genomes_project X 52337572 52380565 + MGP_LPJ_P0095870 Ddx26b protein_coding protein_coding MGP_LPJ_T0095871.1 MGP_LPJ_G0035624.1 mouse_genomes_project X 52337577 52392681 + MGP_LPJ_P0095871 Ddx26b protein_coding protein_coding MGP_LPJ_T0095872.1 MGP_LPJ_G0035624.1 mouse_genomes_project X 52337577 52392684 + MGP_LPJ_P0095872 Ddx26b protein_coding nonsense_mediated_decay MGP_LPJ_T0095873.1 MGP_LPJ_G0035624.1 mouse_genomes_project X 52368661 52392679 + MGP_LPJ_P0095873 Ddx26b protein_coding protein_coding MGP_LPJ_T0095874.1 MGP_LPJ_G0035624.1 mouse_genomes_project X 52389907 52392526 + MGP_LPJ_P0095874 Ddx26b protein_coding protein_coding MGP_LPJ_T0097784.1 MGP_LPJ_G0036152.1 mouse_genomes_project X 163657846 163683687 + MGP_LPJ_P0097784 Asb11 protein_coding protein_coding MGP_LPJ_T0097785.1 MGP_LPJ_G0036152.1 mouse_genomes_project X 163657862 163667850 + Asb11 protein_coding retained_intron MGP_LPJ_T0097786.1 MGP_LPJ_G0036152.1 mouse_genomes_project X 163658910 163683687 + MGP_LPJ_P0097786 Asb11 protein_coding protein_coding MGP_LPJ_T0016635.1 MGP_LPJ_G0014726.1 mouse_genomes_project X 115577714 115579811 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097819.1 MGP_LPJ_G0036160.1 mouse_genomes_project X 165638871 165692548 - MGP_LPJ_P0097819 Ofd1 protein_coding protein_coding MGP_LPJ_T0016391.1 MGP_LPJ_G0014482.1 mouse_genomes_project X 72104106 72104754 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101182.1 MGP_LPJ_G0039445.1 mouse_genomes_project X 119533404 119533540 + Gm23277 snoRNA snoRNA MGP_LPJ_T0016518.1 MGP_LPJ_G0014609.1 mouse_genomes_project X 96487099 96488101 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016802.1 MGP_LPJ_G0014893.1 mouse_genomes_project X 152689049 152689329 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096460.1 MGP_LPJ_G0035768.1 mouse_genomes_project X 74585334 74590599 + MGP_LPJ_P0096460 protein_coding protein_coding MGP_LPJ_T0016859.1 MGP_LPJ_G0014950.1 mouse_genomes_project X 163199577 163199753 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016559.1 MGP_LPJ_G0014650.1 mouse_genomes_project X 101447691 101448177 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016479.1 MGP_LPJ_G0014570.1 mouse_genomes_project X 90686186 90688923 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016430.1 MGP_LPJ_G0014521.1 mouse_genomes_project X 80924160 80924592 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095720.1 MGP_LPJ_G0035568.1 mouse_genomes_project X 38989585 38991958 + MGP_LPJ_P0095720 Gm362 protein_coding protein_coding MGP_LPJ_T0016668.1 MGP_LPJ_G0014759.1 mouse_genomes_project X 126157120 126157784 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097146.1 MGP_LPJ_G0035980.1 mouse_genomes_project X 133053072 133065664 - Nxf2 protein_coding retained_intron MGP_LPJ_T0097147.1 MGP_LPJ_G0035980.1 mouse_genomes_project X 133053074 133074285 - MGP_LPJ_P0097147 Nxf2 protein_coding protein_coding MGP_LPJ_T0097148.1 MGP_LPJ_G0035980.1 mouse_genomes_project X 133053074 133074285 - MGP_LPJ_P0097148 Nxf2 protein_coding protein_coding MGP_LPJ_T0097149.1 MGP_LPJ_G0035980.1 mouse_genomes_project X 133053074 133073427 - MGP_LPJ_P0097149 Nxf2 protein_coding protein_coding MGP_LPJ_T0098348.1 MGP_LPJ_G0036629.1 mouse_genomes_project X 45413606 45413694 + n-R5s6 rRNA rRNA MGP_LPJ_T0096915.1 MGP_LPJ_G0035903.1 mouse_genomes_project X 103966863 103978214 - MGP_LPJ_P0096915 Taf9b protein_coding protein_coding MGP_LPJ_T0096916.1 MGP_LPJ_G0035903.1 mouse_genomes_project X 103966863 103976957 - MGP_LPJ_P0096916 Taf9b protein_coding protein_coding MGP_LPJ_T0096917.1 MGP_LPJ_G0035903.1 mouse_genomes_project X 103975395 103977806 - MGP_LPJ_P0096917 Taf9b protein_coding protein_coding MGP_LPJ_T0016653.1 MGP_LPJ_G0014744.1 mouse_genomes_project X 119212149 119212796 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016619.1 MGP_LPJ_G0014710.1 mouse_genomes_project X 112481025 112481232 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096872.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103490433 103643471 - MGP_LPJ_P0096872 Atrx protein_coding protein_coding MGP_LPJ_T0096873.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103493235 103494869 - Atrx protein_coding retained_intron MGP_LPJ_T0096874.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103494568 103496618 - Atrx protein_coding retained_intron MGP_LPJ_T0096875.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103510823 103520716 - MGP_LPJ_P0096875 Atrx protein_coding nonsense_mediated_decay MGP_LPJ_T0096876.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103510849 103524242 - Atrx protein_coding processed_transcript MGP_LPJ_T0096877.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103520734 103532868 - MGP_LPJ_P0096877 Atrx protein_coding nonsense_mediated_decay MGP_LPJ_T0096878.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103532620 103541068 - Atrx protein_coding retained_intron MGP_LPJ_T0096879.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103532975 103541252 - Atrx protein_coding retained_intron MGP_LPJ_T0096880.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103540678 103545910 - Atrx protein_coding retained_intron MGP_LPJ_T0096881.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103541031 103545622 - Atrx protein_coding retained_intron MGP_LPJ_T0096882.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103545532 103577112 - Atrx protein_coding retained_intron MGP_LPJ_T0096883.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103546098 103577443 - MGP_LPJ_P0096883 Atrx protein_coding protein_coding MGP_LPJ_T0096884.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103550702 103594674 - MGP_LPJ_P0096884 Atrx protein_coding nonsense_mediated_decay MGP_LPJ_T0096885.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103567455 103577153 - MGP_LPJ_P0096885 Atrx protein_coding protein_coding MGP_LPJ_T0096886.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103576977 103643434 - MGP_LPJ_P0096886 Atrx protein_coding protein_coding MGP_LPJ_T0096887.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103578355 103643410 - MGP_LPJ_P0096887 Atrx protein_coding protein_coding MGP_LPJ_T0096888.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103578807 103643418 - MGP_LPJ_P0096888 Atrx protein_coding protein_coding MGP_LPJ_T0096889.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103578807 103643438 - MGP_LPJ_P0096889 Atrx protein_coding protein_coding MGP_LPJ_T0096890.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103579087 103643435 - MGP_LPJ_P0096890 Atrx protein_coding protein_coding MGP_LPJ_T0096891.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103579288 103643427 - MGP_LPJ_P0096891 Atrx protein_coding protein_coding MGP_LPJ_T0096892.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103579327 103643415 - MGP_LPJ_P0096892 Atrx protein_coding protein_coding MGP_LPJ_T0096893.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103580212 103582231 - Atrx protein_coding retained_intron MGP_LPJ_T0096894.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103580232 103643306 - MGP_LPJ_P0096894 Atrx protein_coding protein_coding MGP_LPJ_T0096895.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103583798 103641799 - MGP_LPJ_P0096895 Atrx protein_coding protein_coding MGP_LPJ_T0096896.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103591206 103643371 - MGP_LPJ_P0096896 Atrx protein_coding protein_coding MGP_LPJ_T0096897.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103594631 103643465 - MGP_LPJ_P0096897 Atrx protein_coding protein_coding MGP_LPJ_T0096898.1 MGP_LPJ_G0035897.1 mouse_genomes_project X 103609877 103643414 - Atrx protein_coding processed_transcript MGP_LPJ_T0102506.1 MGP_LPJ_G0040542.1 mouse_genomes_project X 86262127 86263181 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0095393.1 MGP_LPJ_G0035458.1 mouse_genomes_project X 7595697 7604478 + Atp6ap2 protein_coding retained_intron MGP_LPJ_T0095394.1 MGP_LPJ_G0035458.1 mouse_genomes_project X 7595697 7625596 + MGP_LPJ_P0095394 Atp6ap2 protein_coding protein_coding MGP_LPJ_T0016507.1 MGP_LPJ_G0014598.1 mouse_genomes_project X 93920269 93921977 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098360.1 MGP_LPJ_G0036641.1 mouse_genomes_project X 156690486 156690580 - Gm23381 rRNA rRNA MGP_LPJ_T0096541.1 MGP_LPJ_G0035801.1 mouse_genomes_project X 90808860 90905179 + MGP_LPJ_P0096541 Pcyt1b protein_coding protein_coding MGP_LPJ_T0096542.1 MGP_LPJ_G0035801.1 mouse_genomes_project X 90829673 90905179 + MGP_LPJ_P0096542 Pcyt1b protein_coding protein_coding MGP_LPJ_T0096543.1 MGP_LPJ_G0035801.1 mouse_genomes_project X 90886684 90889979 + Pcyt1b protein_coding processed_transcript MGP_LPJ_T0016768.1 MGP_LPJ_G0014859.1 mouse_genomes_project X 144264786 144265244 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098352.1 MGP_LPJ_G0036633.1 mouse_genomes_project X 80157925 80158042 + n-R5s9 rRNA rRNA MGP_LPJ_T0099911.1 MGP_LPJ_G0038174.1 mouse_genomes_project X 98452903 98452967 + Gm27510 snRNA snRNA MGP_LPJ_T0096635.1 MGP_LPJ_G0035826.1 mouse_genomes_project X 94690616 94734771 - MGP_LPJ_P0096635 Eda2r protein_coding protein_coding MGP_LPJ_T0096636.1 MGP_LPJ_G0035826.1 mouse_genomes_project X 94693914 94734705 - MGP_LPJ_P0096636 Eda2r protein_coding protein_coding MGP_LPJ_T0096637.1 MGP_LPJ_G0035826.1 mouse_genomes_project X 94694567 94734771 - Eda2r protein_coding retained_intron MGP_LPJ_T0096638.1 MGP_LPJ_G0035826.1 mouse_genomes_project X 94697629 94734727 - Eda2r protein_coding retained_intron MGP_LPJ_T0097043.1 MGP_LPJ_G0035953.1 mouse_genomes_project X 126248022 126249886 + MGP_LPJ_P0097043 Rbm31y protein_coding protein_coding MGP_LPJ_T0016863.1 MGP_LPJ_G0014954.1 mouse_genomes_project X 165258907 165259295 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016630.1 MGP_LPJ_G0014721.1 mouse_genomes_project X 115028170 115028438 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016651.1 MGP_LPJ_G0014742.1 mouse_genomes_project X 118968350 118969325 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101160.1 MGP_LPJ_G0039423.1 mouse_genomes_project X 65092194 65092322 - Gm22435 snoRNA snoRNA MGP_LPJ_T0096733.1 MGP_LPJ_G0035850.1 mouse_genomes_project X 98723435 98726035 - Gm614 protein_coding processed_transcript MGP_LPJ_T0096734.1 MGP_LPJ_G0035850.1 mouse_genomes_project X 98723435 98726052 - MGP_LPJ_P0096734 Gm614 protein_coding protein_coding MGP_LPJ_T0016808.1 MGP_LPJ_G0014899.1 mouse_genomes_project X 154169732 154170434 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016397.1 MGP_LPJ_G0014488.1 mouse_genomes_project X 73371993 73372710 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095509.1 MGP_LPJ_G0035493.1 mouse_genomes_project X 16097922 16118192 - Uxt protein_coding processed_transcript MGP_LPJ_T0095510.1 MGP_LPJ_G0035493.1 mouse_genomes_project X 16107862 16118218 - MGP_LPJ_P0095510 Uxt protein_coding protein_coding MGP_LPJ_T0095511.1 MGP_LPJ_G0035493.1 mouse_genomes_project X 16108123 16118116 - Uxt protein_coding retained_intron MGP_LPJ_T0095512.1 MGP_LPJ_G0035493.1 mouse_genomes_project X 16108129 16118201 - Uxt protein_coding processed_transcript MGP_LPJ_T0095513.1 MGP_LPJ_G0035493.1 mouse_genomes_project X 16115262 16118187 - Uxt protein_coding retained_intron MGP_LPJ_T0095514.1 MGP_LPJ_G0035493.1 mouse_genomes_project X 16117617 16118175 - Uxt protein_coding processed_transcript MGP_LPJ_T0016574.1 MGP_LPJ_G0014665.1 mouse_genomes_project X 103932211 103932824 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016297.1 MGP_LPJ_G0014388.1 mouse_genomes_project X 51924540 51925360 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016488.1 MGP_LPJ_G0014579.1 mouse_genomes_project X 91531113 91532014 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011233.1 MGP_LPJ_G0009351.1 mouse_genomes_project X 145507438 145507546 + Mir764 miRNA miRNA MGP_LPJ_T0016609.1 MGP_LPJ_G0014700.1 mouse_genomes_project X 110605252 110605460 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095593.1 MGP_LPJ_G0035523.1 mouse_genomes_project X 32486975 32508529 - MGP_LPJ_P0095593 Akap14 protein_coding protein_coding MGP_LPJ_T0097633.1 MGP_LPJ_G0036116.1 mouse_genomes_project X 156867524 156869459 + MGP_LPJ_P0097633 Klhl34 protein_coding protein_coding MGP_LPJ_T0016572.1 MGP_LPJ_G0014663.1 mouse_genomes_project X 103398360 103399201 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011798.1 MGP_LPJ_G0009916.1 mouse_genomes_project X 161878619 161878920 + Gm22257 misc_RNA misc_RNA MGP_LPJ_T0095289.1 MGP_LPJ_G0035424.1 mouse_genomes_project X 2717629 2732675 - MGP_LPJ_P0095289 Suv39h1 protein_coding protein_coding MGP_LPJ_T0095290.1 MGP_LPJ_G0035424.1 mouse_genomes_project X 2717884 2732536 - Suv39h1 protein_coding retained_intron MGP_LPJ_T0095291.1 MGP_LPJ_G0035424.1 mouse_genomes_project X 2717893 2732173 - MGP_LPJ_P0095291 Suv39h1 protein_coding protein_coding MGP_LPJ_T0095292.1 MGP_LPJ_G0035424.1 mouse_genomes_project X 2723867 2732644 - MGP_LPJ_P0095292 Suv39h1 protein_coding protein_coding MGP_LPJ_T0095293.1 MGP_LPJ_G0035424.1 mouse_genomes_project X 2728342 2732228 - Suv39h1 protein_coding retained_intron MGP_LPJ_T0016195.1 MGP_LPJ_G0014286.1 mouse_genomes_project X 14533865 14534361 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011782.1 MGP_LPJ_G0009900.1 mouse_genomes_project X 101287664 101287757 + Gm27987 misc_RNA misc_RNA MGP_LPJ_T0095319.1 MGP_LPJ_G0035430.1 mouse_genomes_project X 2863877 2876595 - MGP_LPJ_P0095319 Porcn protein_coding protein_coding MGP_LPJ_T0095320.1 MGP_LPJ_G0035430.1 mouse_genomes_project X 2863878 2876561 - MGP_LPJ_P0095320 Porcn protein_coding nonsense_mediated_decay MGP_LPJ_T0095321.1 MGP_LPJ_G0035430.1 mouse_genomes_project X 2863879 2876571 - MGP_LPJ_P0095321 Porcn protein_coding protein_coding MGP_LPJ_T0095322.1 MGP_LPJ_G0035430.1 mouse_genomes_project X 2863879 2876571 - MGP_LPJ_P0095322 Porcn protein_coding protein_coding MGP_LPJ_T0095323.1 MGP_LPJ_G0035430.1 mouse_genomes_project X 2863879 2876571 - MGP_LPJ_P0095323 Porcn protein_coding protein_coding MGP_LPJ_T0095324.1 MGP_LPJ_G0035430.1 mouse_genomes_project X 2863882 2876567 - MGP_LPJ_P0095324 Porcn protein_coding nonsense_mediated_decay MGP_LPJ_T0095325.1 MGP_LPJ_G0035430.1 mouse_genomes_project X 2873508 2876583 - Porcn protein_coding retained_intron MGP_LPJ_T0095594.1 MGP_LPJ_G0035524.1 mouse_genomes_project X 32535998 32539578 - MGP_LPJ_P0095594 Ndufa1 protein_coding protein_coding MGP_LPJ_T0011140.1 MGP_LPJ_G0009258.1 mouse_genomes_project X 8690016 8690085 + Gm25246 miRNA miRNA MGP_LPJ_T0018635.1 MGP_LPJ_G0015713.1 mouse_genomes_project X 137688947 137835357 - Platr21 processed_transcript processed_transcript MGP_LPJ_T0018636.1 MGP_LPJ_G0015713.1 mouse_genomes_project X 137826077 137836325 - Platr21 processed_transcript processed_transcript MGP_LPJ_T0101432.1 MGP_LPJ_G0039599.1 mouse_genomes_project X 17647797 17648560 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101433.1 MGP_LPJ_G0039599.1 mouse_genomes_project X 17647894 17648503 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0016723.1 MGP_LPJ_G0014814.1 mouse_genomes_project X 137645028 137645738 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098358.1 MGP_LPJ_G0036639.1 mouse_genomes_project X 151173919 151174030 + n-R5s15 rRNA rRNA MGP_LPJ_T0101155.1 MGP_LPJ_G0039418.1 mouse_genomes_project X 47344187 47344304 + Gm22539 snoRNA snoRNA MGP_LPJ_T0096090.1 MGP_LPJ_G0035702.1 mouse_genomes_project X 70209791 70213524 - MGP_LPJ_P0096090 Pnck protein_coding protein_coding MGP_LPJ_T0096091.1 MGP_LPJ_G0035702.1 mouse_genomes_project X 70209791 70213628 - MGP_LPJ_P0096091 Pnck protein_coding protein_coding MGP_LPJ_T0096092.1 MGP_LPJ_G0035702.1 mouse_genomes_project X 70209792 70213923 - MGP_LPJ_P0096092 Pnck protein_coding protein_coding MGP_LPJ_T0096093.1 MGP_LPJ_G0035702.1 mouse_genomes_project X 70210048 70211629 - Pnck protein_coding retained_intron MGP_LPJ_T0096094.1 MGP_LPJ_G0035702.1 mouse_genomes_project X 70211073 70213233 - MGP_LPJ_P0096094 Pnck protein_coding protein_coding MGP_LPJ_T0016342.1 MGP_LPJ_G0014433.1 mouse_genomes_project X 61209535 61210438 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097093.1 MGP_LPJ_G0035967.1 mouse_genomes_project X 132456864 132510851 + MGP_LPJ_P0097093 Drp2 protein_coding unknown_likely_coding MGP_LPJ_T0097094.1 MGP_LPJ_G0035967.1 mouse_genomes_project X 132457024 132506978 + MGP_LPJ_P0097094 Drp2 protein_coding protein_coding MGP_LPJ_T0097095.1 MGP_LPJ_G0035967.1 mouse_genomes_project X 132457101 132510843 + MGP_LPJ_P0097095 Drp2 protein_coding protein_coding MGP_LPJ_T0097096.1 MGP_LPJ_G0035967.1 mouse_genomes_project X 132457826 132507886 + MGP_LPJ_P0097096 Drp2 protein_coding protein_coding MGP_LPJ_T0097097.1 MGP_LPJ_G0035967.1 mouse_genomes_project X 132457848 132507285 + MGP_LPJ_P0097097 Drp2 protein_coding protein_coding MGP_LPJ_T0097098.1 MGP_LPJ_G0035967.1 mouse_genomes_project X 132477310 132489688 + Drp2 protein_coding processed_transcript MGP_LPJ_T0097099.1 MGP_LPJ_G0035967.1 mouse_genomes_project X 132477364 132507678 + Drp2 protein_coding retained_intron MGP_LPJ_T0096997.1 MGP_LPJ_G0035932.1 mouse_genomes_project X 110117705 110179656 + MGP_LPJ_P0096997 2010106E10Rik protein_coding protein_coding MGP_LPJ_T0096998.1 MGP_LPJ_G0035932.1 mouse_genomes_project X 110117706 110179646 + MGP_LPJ_P0096998 2010106E10Rik protein_coding protein_coding MGP_LPJ_T0099950.1 MGP_LPJ_G0038213.1 mouse_genomes_project X 164970547 164970654 - Gm22062 snRNA snRNA MGP_LPJ_T0016828.1 MGP_LPJ_G0014919.1 mouse_genomes_project X 157219679 157222341 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097646.1 MGP_LPJ_G0036119.1 mouse_genomes_project X 158433314 158437695 + Eif1ax protein_coding retained_intron MGP_LPJ_T0097647.1 MGP_LPJ_G0036119.1 mouse_genomes_project X 158433314 158451596 + MGP_LPJ_P0097647 Eif1ax protein_coding protein_coding MGP_LPJ_T0097396.1 MGP_LPJ_G0036064.1 mouse_genomes_project X 143953344 144012855 - MGP_LPJ_P0097396 Amot protein_coding protein_coding MGP_LPJ_T0097397.1 MGP_LPJ_G0036064.1 mouse_genomes_project X 143958748 143993865 - MGP_LPJ_P0097397 Amot protein_coding protein_coding MGP_LPJ_T0097398.1 MGP_LPJ_G0036064.1 mouse_genomes_project X 143966628 143968793 - Amot protein_coding retained_intron MGP_LPJ_T0097399.1 MGP_LPJ_G0036064.1 mouse_genomes_project X 143982531 144013106 - MGP_LPJ_P0097399 Amot protein_coding protein_coding MGP_LPJ_T0095967.1 MGP_LPJ_G0035660.1 mouse_genomes_project X 65086048 65127009 + MGP_LPJ_P0095967 Fmr1 protein_coding protein_coding MGP_LPJ_T0095968.1 MGP_LPJ_G0035660.1 mouse_genomes_project X 65086089 65099657 + Fmr1 protein_coding retained_intron MGP_LPJ_T0095969.1 MGP_LPJ_G0035660.1 mouse_genomes_project X 65086089 65116061 + Fmr1 protein_coding retained_intron MGP_LPJ_T0095970.1 MGP_LPJ_G0035660.1 mouse_genomes_project X 65086089 65087593 + Fmr1 protein_coding processed_transcript MGP_LPJ_T0095971.1 MGP_LPJ_G0035660.1 mouse_genomes_project X 65086131 65127009 + MGP_LPJ_P0095971 Fmr1 protein_coding protein_coding MGP_LPJ_T0095972.1 MGP_LPJ_G0035660.1 mouse_genomes_project X 65086309 65127009 + MGP_LPJ_P0095972 Fmr1 protein_coding protein_coding MGP_LPJ_T0095973.1 MGP_LPJ_G0035660.1 mouse_genomes_project X 65086309 65127009 + MGP_LPJ_P0095973 Fmr1 protein_coding protein_coding MGP_LPJ_T0095974.1 MGP_LPJ_G0035660.1 mouse_genomes_project X 65086318 65127009 + MGP_LPJ_P0095974 Fmr1 protein_coding protein_coding MGP_LPJ_T0095975.1 MGP_LPJ_G0035660.1 mouse_genomes_project X 65086324 65127009 + MGP_LPJ_P0095975 Fmr1 protein_coding protein_coding MGP_LPJ_T0095976.1 MGP_LPJ_G0035660.1 mouse_genomes_project X 65103965 65115358 + Fmr1 protein_coding retained_intron MGP_LPJ_T0095977.1 MGP_LPJ_G0035660.1 mouse_genomes_project X 65106829 65107503 + Fmr1 protein_coding retained_intron MGP_LPJ_T0095978.1 MGP_LPJ_G0035660.1 mouse_genomes_project X 65120896 65122369 + Fmr1 protein_coding retained_intron MGP_LPJ_T0016853.1 MGP_LPJ_G0014944.1 mouse_genomes_project X 162100284 162100684 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097136.1 MGP_LPJ_G0035978.1 mouse_genomes_project X 132835241 132840516 + MGP_LPJ_P0097136 Armcx3 protein_coding protein_coding MGP_LPJ_T0097137.1 MGP_LPJ_G0035978.1 mouse_genomes_project X 132835253 132839196 + MGP_LPJ_P0097137 Armcx3 protein_coding protein_coding MGP_LPJ_T0097138.1 MGP_LPJ_G0035978.1 mouse_genomes_project X 132835293 132840546 + MGP_LPJ_P0097138 Armcx3 protein_coding protein_coding MGP_LPJ_T0011792.1 MGP_LPJ_G0009910.1 mouse_genomes_project X 136576067 136576326 - Gm24675 misc_RNA misc_RNA MGP_LPJ_T0102525.1 MGP_LPJ_G0040561.1 mouse_genomes_project X 153084753 153087565 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0095597.1 MGP_LPJ_G0035527.1 mouse_genomes_project X 32565605 32574113 - MGP_LPJ_P0095597 Rhox1 protein_coding protein_coding MGP_LPJ_T0016282.1 MGP_LPJ_G0014373.1 mouse_genomes_project X 46721591 46722028 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016156.1 MGP_LPJ_G0014247.1 mouse_genomes_project X 3816440 3818381 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016261.1 MGP_LPJ_G0014352.1 mouse_genomes_project X 40263209 40264179 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009390.1 MGP_LPJ_G0007540.1 mouse_genomes_project X 33847089 33853873 + Gm7598 lincRNA lincRNA MGP_LPJ_T0011152.1 MGP_LPJ_G0009270.1 mouse_genomes_project X 37321261 37321388 + Gm44490 miRNA miRNA MGP_LPJ_T0016582.1 MGP_LPJ_G0014673.1 mouse_genomes_project X 104957045 104957930 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016350.1 MGP_LPJ_G0014441.1 mouse_genomes_project X 63334542 63335066 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011781.1 MGP_LPJ_G0009899.1 mouse_genomes_project X 101278379 101278450 + Gm27798 misc_RNA misc_RNA MGP_LPJ_T0097003.1 MGP_LPJ_G0035934.1 mouse_genomes_project X 110253932 110334809 - MGP_LPJ_P0097003 Pof1b protein_coding protein_coding MGP_LPJ_T0096383.1 MGP_LPJ_G0035743.1 mouse_genomes_project X 71442061 71448612 + MGP_LPJ_P0096383 protein_coding protein_coding MGP_LPJ_T0016411.1 MGP_LPJ_G0014502.1 mouse_genomes_project X 75346010 75346382 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016151.1 MGP_LPJ_G0014242.1 mouse_genomes_project X 3750457 3751051 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016494.1 MGP_LPJ_G0014585.1 mouse_genomes_project X 91856660 91856986 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096254.1 MGP_LPJ_G0035723.1 mouse_genomes_project X 70829572 70832773 + MGP_LPJ_P0096254 Emd protein_coding protein_coding MGP_LPJ_T0096255.1 MGP_LPJ_G0035723.1 mouse_genomes_project X 70829637 70832247 + MGP_LPJ_P0096255 Emd protein_coding protein_coding MGP_LPJ_T0096256.1 MGP_LPJ_G0035723.1 mouse_genomes_project X 70829646 70830571 + Emd protein_coding processed_transcript MGP_LPJ_T0096257.1 MGP_LPJ_G0035723.1 mouse_genomes_project X 70829695 70835739 + MGP_LPJ_P0096257 Emd protein_coding protein_coding MGP_LPJ_T0096258.1 MGP_LPJ_G0035723.1 mouse_genomes_project X 70829701 70832209 + MGP_LPJ_P0096258 Emd protein_coding nonsense_mediated_decay MGP_LPJ_T0016786.1 MGP_LPJ_G0014877.1 mouse_genomes_project X 149817493 149818152 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016333.1 MGP_LPJ_G0014424.1 mouse_genomes_project X 58286424 58287524 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016760.1 MGP_LPJ_G0014851.1 mouse_genomes_project X 143009408 143010774 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011169.1 MGP_LPJ_G0009287.1 mouse_genomes_project X 52474727 52474790 - Mir5116 miRNA miRNA MGP_LPJ_T0016716.1 MGP_LPJ_G0014807.1 mouse_genomes_project X 135556712 135558395 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016288.1 MGP_LPJ_G0014379.1 mouse_genomes_project X 48427541 48428939 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096547.1 MGP_LPJ_G0035803.1 mouse_genomes_project X 91135938 91142786 + MGP_LPJ_P0096547 AU015836 protein_coding protein_coding MGP_LPJ_T0096548.1 MGP_LPJ_G0035803.1 mouse_genomes_project X 91135953 91142786 + MGP_LPJ_P0096548 AU015836 protein_coding nonsense_mediated_decay MGP_LPJ_T0096549.1 MGP_LPJ_G0035803.1 mouse_genomes_project X 91135961 91136938 + MGP_LPJ_P0096549 AU015836 protein_coding protein_coding MGP_LPJ_T0096550.1 MGP_LPJ_G0035803.1 mouse_genomes_project X 91136921 91138979 + AU015836 protein_coding processed_transcript MGP_LPJ_T0096551.1 MGP_LPJ_G0035803.1 mouse_genomes_project X 91137075 91142387 + MGP_LPJ_P0096551 AU015836 protein_coding protein_coding MGP_LPJ_T0016823.1 MGP_LPJ_G0014914.1 mouse_genomes_project X 156675846 156676279 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016353.1 MGP_LPJ_G0014444.1 mouse_genomes_project X 64063506 64064198 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016381.1 MGP_LPJ_G0014472.1 mouse_genomes_project X 71097825 71098269 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011239.1 MGP_LPJ_G0009357.1 mouse_genomes_project X 149331431 149331492 - Mir3620 miRNA miRNA MGP_LPJ_T0016782.1 MGP_LPJ_G0014873.1 mouse_genomes_project X 149255100 149257531 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016449.1 MGP_LPJ_G0014540.1 mouse_genomes_project X 85587917 85588388 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096106.1 MGP_LPJ_G0035704.1 mouse_genomes_project X 70241972 70272075 - MGP_LPJ_P0096106 Bcap31 protein_coding protein_coding MGP_LPJ_T0095572.1 MGP_LPJ_G0035516.1 mouse_genomes_project X 32154167 32154739 + Ube2a protein_coding processed_transcript MGP_LPJ_T0095573.1 MGP_LPJ_G0035516.1 mouse_genomes_project X 32154598 32155635 + Ube2a protein_coding retained_intron MGP_LPJ_T0095574.1 MGP_LPJ_G0035516.1 mouse_genomes_project X 32154598 32166566 + MGP_LPJ_P0095574 Ube2a protein_coding protein_coding MGP_LPJ_T0095575.1 MGP_LPJ_G0035516.1 mouse_genomes_project X 32154608 32167240 + MGP_LPJ_P0095575 Ube2a protein_coding protein_coding MGP_LPJ_T0095576.1 MGP_LPJ_G0035516.1 mouse_genomes_project X 32154753 32166456 + MGP_LPJ_P0095576 Ube2a protein_coding protein_coding MGP_LPJ_T0095577.1 MGP_LPJ_G0035516.1 mouse_genomes_project X 32164792 32166571 + Ube2a protein_coding retained_intron MGP_LPJ_T0016690.1 MGP_LPJ_G0014781.1 mouse_genomes_project X 132754992 132755350 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097019.1 MGP_LPJ_G0035938.1 mouse_genomes_project X 112527469 112528021 + MGP_LPJ_P0097019 Ube2dnl1 protein_coding protein_coding MGP_LPJ_T0099945.1 MGP_LPJ_G0038208.1 mouse_genomes_project X 161280882 161280986 + Gm23794 snRNA snRNA MGP_LPJ_T0016399.1 MGP_LPJ_G0014490.1 mouse_genomes_project X 73608150 73608405 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016204.1 MGP_LPJ_G0014295.1 mouse_genomes_project X 15648325 15649652 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095588.1 MGP_LPJ_G0035521.1 mouse_genomes_project X 32402964 32421724 - MGP_LPJ_P0095588 Upf3b protein_coding protein_coding MGP_LPJ_T0095589.1 MGP_LPJ_G0035521.1 mouse_genomes_project X 32406961 32415925 - MGP_LPJ_P0095589 Upf3b protein_coding protein_coding MGP_LPJ_T0095590.1 MGP_LPJ_G0035521.1 mouse_genomes_project X 32408735 32421724 - Upf3b protein_coding processed_transcript MGP_LPJ_T0098344.1 MGP_LPJ_G0036625.1 mouse_genomes_project X 5465441 5465550 + Gm25885 rRNA rRNA MGP_LPJ_T0096822.1 MGP_LPJ_G0035871.1 mouse_genomes_project X 99791419 100014010 - MGP_LPJ_P0096822 Hdac8 protein_coding protein_coding MGP_LPJ_T0096823.1 MGP_LPJ_G0035871.1 mouse_genomes_project X 99911555 100013732 - MGP_LPJ_P0096823 Hdac8 protein_coding nonsense_mediated_decay MGP_LPJ_T0096824.1 MGP_LPJ_G0035871.1 mouse_genomes_project X 99913510 100013797 - Hdac8 protein_coding processed_transcript MGP_LPJ_T0096825.1 MGP_LPJ_G0035871.1 mouse_genomes_project X 99920438 100013996 - Hdac8 protein_coding processed_transcript MGP_LPJ_T0096826.1 MGP_LPJ_G0035871.1 mouse_genomes_project X 100006808 100013392 - Hdac8 protein_coding retained_intron MGP_LPJ_T0016225.1 MGP_LPJ_G0014316.1 mouse_genomes_project X 31943033 31943830 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016625.1 MGP_LPJ_G0014716.1 mouse_genomes_project X 113325472 113325863 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095183.1 MGP_LPJ_G0035402.1 mouse_genomes_project X 2269192 2279798 + MGP_LPJ_P0095183 Prickle3 protein_coding protein_coding MGP_LPJ_T0095184.1 MGP_LPJ_G0035402.1 mouse_genomes_project X 2269404 2273061 + Prickle3 protein_coding retained_intron MGP_LPJ_T0095185.1 MGP_LPJ_G0035402.1 mouse_genomes_project X 2270465 2281655 + MGP_LPJ_P0095185 Prickle3 protein_coding protein_coding MGP_LPJ_T0095186.1 MGP_LPJ_G0035402.1 mouse_genomes_project X 2274695 2279798 + Prickle3 protein_coding retained_intron MGP_LPJ_T0095187.1 MGP_LPJ_G0035402.1 mouse_genomes_project X 2277962 2279002 + Prickle3 protein_coding retained_intron MGP_LPJ_T0099887.1 MGP_LPJ_G0038150.1 mouse_genomes_project X 32364076 32364185 - Gm26099 snRNA snRNA MGP_LPJ_T0102524.1 MGP_LPJ_G0040560.1 mouse_genomes_project X 151989686 151990347 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0011193.1 MGP_LPJ_G0009311.1 mouse_genomes_project X 64414466 64414541 - Mir509 miRNA miRNA MGP_LPJ_T0011157.1 MGP_LPJ_G0009275.1 mouse_genomes_project X 48283030 48283121 - Mir92-2 miRNA miRNA MGP_LPJ_T0016211.1 MGP_LPJ_G0014302.1 mouse_genomes_project X 17421057 17423026 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016265.1 MGP_LPJ_G0014356.1 mouse_genomes_project X 41195625 41195860 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011228.1 MGP_LPJ_G0009346.1 mouse_genomes_project X 141222654 141222752 + Mir652 miRNA miRNA MGP_LPJ_T0016610.1 MGP_LPJ_G0014701.1 mouse_genomes_project X 110612321 110613264 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097607.1 MGP_LPJ_G0036110.1 mouse_genomes_project X 154620999 154840883 + Gm15155 protein_coding processed_transcript MGP_LPJ_T0097608.1 MGP_LPJ_G0036110.1 mouse_genomes_project X 154621033 155347882 + MGP_LPJ_P0097608 Gm15155 protein_coding protein_coding MGP_LPJ_T0016325.1 MGP_LPJ_G0014416.1 mouse_genomes_project X 57463801 57464644 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096518.1 MGP_LPJ_G0035787.1 mouse_genomes_project X 83084250 83088404 + MGP_LPJ_P0096518 Nr0b1 protein_coding protein_coding MGP_LPJ_T0095847.1 MGP_LPJ_G0035610.1 mouse_genomes_project X 48817818 48844580 - MGP_LPJ_P0095847 Fam122b protein_coding protein_coding MGP_LPJ_T0095848.1 MGP_LPJ_G0035610.1 mouse_genomes_project X 48817828 48843795 - MGP_LPJ_P0095848 Fam122b protein_coding protein_coding MGP_LPJ_T0095849.1 MGP_LPJ_G0035610.1 mouse_genomes_project X 48818149 48844573 - MGP_LPJ_P0095849 Fam122b protein_coding protein_coding MGP_LPJ_T0095850.1 MGP_LPJ_G0035610.1 mouse_genomes_project X 48819267 48844580 - Fam122b protein_coding processed_transcript MGP_LPJ_T0016480.1 MGP_LPJ_G0014571.1 mouse_genomes_project X 90792177 90792448 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016344.1 MGP_LPJ_G0014435.1 mouse_genomes_project X 61355230 61355567 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097345.1 MGP_LPJ_G0036052.1 mouse_genomes_project X 140774783 140860777 - MGP_LPJ_P0097345 Acsl4 protein_coding protein_coding MGP_LPJ_T0097346.1 MGP_LPJ_G0036052.1 mouse_genomes_project X 140777458 140784836 - Acsl4 protein_coding processed_transcript MGP_LPJ_T0097347.1 MGP_LPJ_G0036052.1 mouse_genomes_project X 140777464 140860747 - MGP_LPJ_P0097347 Acsl4 protein_coding protein_coding MGP_LPJ_T0099932.1 MGP_LPJ_G0038195.1 mouse_genomes_project X 136728398 136728505 - Gm22057 snRNA snRNA MGP_LPJ_T0095825.1 MGP_LPJ_G0035601.1 mouse_genomes_project X 46893371 47178248 - MGP_LPJ_P0095825 Hs6st2 protein_coding protein_coding MGP_LPJ_T0095826.1 MGP_LPJ_G0035601.1 mouse_genomes_project X 46893371 47178401 - MGP_LPJ_P0095826 Hs6st2 protein_coding protein_coding MGP_LPJ_T0095827.1 MGP_LPJ_G0035601.1 mouse_genomes_project X 47173327 47177893 - Hs6st2 protein_coding retained_intron MGP_LPJ_T0095828.1 MGP_LPJ_G0035601.1 mouse_genomes_project X 47176536 47177110 - Hs6st2 protein_coding processed_transcript MGP_LPJ_T0095829.1 MGP_LPJ_G0035601.1 mouse_genomes_project X 47176722 47177631 - Hs6st2 protein_coding processed_transcript MGP_LPJ_T0005642.1 MGP_LPJ_G0004753.1 mouse_genomes_project X 166605097 166608038 + Gm15239 antisense antisense MGP_LPJ_T0016334.1 MGP_LPJ_G0014425.1 mouse_genomes_project X 58407333 58408055 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016579.1 MGP_LPJ_G0014670.1 mouse_genomes_project X 104523069 104523287 + processed_pseudogene processed_pseudogene MGP_LPJ_T0097652.1 MGP_LPJ_G0036121.1 mouse_genomes_project X 158592776 158628293 + MGP_LPJ_P0097652 A830080D01Rik protein_coding protein_coding MGP_LPJ_T0097653.1 MGP_LPJ_G0036121.1 mouse_genomes_project X 158608799 158669390 + MGP_LPJ_P0097653 A830080D01Rik protein_coding protein_coding MGP_LPJ_T0097654.1 MGP_LPJ_G0036121.1 mouse_genomes_project X 158608949 158667659 + MGP_LPJ_P0097654 A830080D01Rik protein_coding protein_coding MGP_LPJ_T0097655.1 MGP_LPJ_G0036121.1 mouse_genomes_project X 158617873 158628343 + MGP_LPJ_P0097655 A830080D01Rik protein_coding protein_coding MGP_LPJ_T0097656.1 MGP_LPJ_G0036121.1 mouse_genomes_project X 158643302 158668511 + A830080D01Rik protein_coding processed_transcript MGP_LPJ_T0097657.1 MGP_LPJ_G0036121.1 mouse_genomes_project X 158643991 158651551 + A830080D01Rik protein_coding retained_intron MGP_LPJ_T0101437.1 MGP_LPJ_G0039603.1 mouse_genomes_project X 69409230 69410129 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0101438.1 MGP_LPJ_G0039603.1 mouse_genomes_project X 69409230 69409962 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0095820.1 MGP_LPJ_G0035600.1 mouse_genomes_project X 46620104 46627563 - Mbnl3 protein_coding retained_intron MGP_LPJ_T0095821.1 MGP_LPJ_G0035600.1 mouse_genomes_project X 46620141 46668862 - MGP_LPJ_P0095821 Mbnl3 protein_coding protein_coding MGP_LPJ_T0095822.1 MGP_LPJ_G0035600.1 mouse_genomes_project X 46620537 46641261 - Mbnl3 protein_coding processed_transcript MGP_LPJ_T0095823.1 MGP_LPJ_G0035600.1 mouse_genomes_project X 46620659 46668782 - MGP_LPJ_P0095823 Mbnl3 protein_coding protein_coding MGP_LPJ_T0095824.1 MGP_LPJ_G0035600.1 mouse_genomes_project X 46668604 46715609 - Mbnl3 protein_coding processed_transcript MGP_LPJ_T0016578.1 MGP_LPJ_G0014669.1 mouse_genomes_project X 104415695 104417049 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016230.1 MGP_LPJ_G0014321.1 mouse_genomes_project X 34277312 34278870 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095844.1 MGP_LPJ_G0035609.1 mouse_genomes_project X 48639678 48814563 - MGP_LPJ_P0095844 Plac1 protein_coding protein_coding MGP_LPJ_T0095845.1 MGP_LPJ_G0035609.1 mouse_genomes_project X 48639679 48685958 - MGP_LPJ_P0095845 Plac1 protein_coding protein_coding MGP_LPJ_T0095846.1 MGP_LPJ_G0035609.1 mouse_genomes_project X 48639855 48783301 - MGP_LPJ_P0095846 Plac1 protein_coding protein_coding MGP_LPJ_T0011158.1 MGP_LPJ_G0009276.1 mouse_genomes_project X 48283175 48283259 - Mir19b-2 miRNA miRNA MGP_LPJ_T0096095.1 MGP_LPJ_G0035703.1 mouse_genomes_project X 70227532 70238309 + MGP_LPJ_P0096095 Slc6a8 protein_coding protein_coding MGP_LPJ_T0096096.1 MGP_LPJ_G0035703.1 mouse_genomes_project X 70229527 70237104 + MGP_LPJ_P0096096 Slc6a8 protein_coding protein_coding MGP_LPJ_T0096097.1 MGP_LPJ_G0035703.1 mouse_genomes_project X 70229609 70238314 + MGP_LPJ_P0096097 Slc6a8 protein_coding protein_coding MGP_LPJ_T0096098.1 MGP_LPJ_G0035703.1 mouse_genomes_project X 70229739 70233145 + Slc6a8 protein_coding retained_intron MGP_LPJ_T0096099.1 MGP_LPJ_G0035703.1 mouse_genomes_project X 70231327 70233164 + MGP_LPJ_P0096099 Slc6a8 protein_coding protein_coding MGP_LPJ_T0096100.1 MGP_LPJ_G0035703.1 mouse_genomes_project X 70232665 70238309 + MGP_LPJ_P0096100 Slc6a8 protein_coding nonsense_mediated_decay MGP_LPJ_T0096101.1 MGP_LPJ_G0035703.1 mouse_genomes_project X 70232878 70235581 + Slc6a8 protein_coding retained_intron MGP_LPJ_T0096102.1 MGP_LPJ_G0035703.1 mouse_genomes_project X 70233973 70236913 + Slc6a8 protein_coding retained_intron MGP_LPJ_T0096103.1 MGP_LPJ_G0035703.1 mouse_genomes_project X 70234697 70235812 + Slc6a8 protein_coding processed_transcript MGP_LPJ_T0096104.1 MGP_LPJ_G0035703.1 mouse_genomes_project X 70234712 70235728 + Slc6a8 protein_coding retained_intron MGP_LPJ_T0096105.1 MGP_LPJ_G0035703.1 mouse_genomes_project X 70234712 70235815 + Slc6a8 protein_coding retained_intron MGP_LPJ_T0095467.1 MGP_LPJ_G0035482.1 mouse_genomes_project X 15684750 15697054 + MGP_LPJ_P0095467 Rgn protein_coding protein_coding MGP_LPJ_T0096378.1 MGP_LPJ_G0035739.1 mouse_genomes_project X 71175582 71176518 - MGP_LPJ_P0096378 Olfr1326-ps1 protein_coding protein_coding MGP_LPJ_T0016555.1 MGP_LPJ_G0014646.1 mouse_genomes_project X 101280220 101280786 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095295.1 MGP_LPJ_G0035426.1 mouse_genomes_project X 2791800 2801304 - MGP_LPJ_P0095295 Wdr13 protein_coding protein_coding MGP_LPJ_T0095296.1 MGP_LPJ_G0035426.1 mouse_genomes_project X 2791802 2801354 - MGP_LPJ_P0095296 Wdr13 protein_coding nonsense_mediated_decay MGP_LPJ_T0095297.1 MGP_LPJ_G0035426.1 mouse_genomes_project X 2791823 2801266 - MGP_LPJ_P0095297 Wdr13 protein_coding protein_coding MGP_LPJ_T0095298.1 MGP_LPJ_G0035426.1 mouse_genomes_project X 2793803 2801319 - MGP_LPJ_P0095298 Wdr13 protein_coding nonsense_mediated_decay MGP_LPJ_T0095299.1 MGP_LPJ_G0035426.1 mouse_genomes_project X 2793907 2801316 - MGP_LPJ_P0095299 Wdr13 protein_coding protein_coding MGP_LPJ_T0095300.1 MGP_LPJ_G0035426.1 mouse_genomes_project X 2794200 2797015 - Wdr13 protein_coding retained_intron MGP_LPJ_T0095301.1 MGP_LPJ_G0035426.1 mouse_genomes_project X 2796531 2801315 - Wdr13 protein_coding processed_transcript MGP_LPJ_T0095302.1 MGP_LPJ_G0035426.1 mouse_genomes_project X 2797638 2801341 - MGP_LPJ_P0095302 Wdr13 protein_coding protein_coding MGP_LPJ_T0095303.1 MGP_LPJ_G0035426.1 mouse_genomes_project X 2798215 2801009 - Wdr13 protein_coding retained_intron MGP_LPJ_T0095304.1 MGP_LPJ_G0035426.1 mouse_genomes_project X 2800614 2801388 - Wdr13 protein_coding processed_transcript MGP_LPJ_T0011241.1 MGP_LPJ_G0009359.1 mouse_genomes_project X 150751588 150751671 + Mirlet7f-2 miRNA miRNA MGP_LPJ_T0095733.1 MGP_LPJ_G0035574.1 mouse_genomes_project X 43409149 43463675 + MGP_LPJ_P0095733 Ocrl protein_coding protein_coding MGP_LPJ_T0095734.1 MGP_LPJ_G0035574.1 mouse_genomes_project X 43409200 43454637 + MGP_LPJ_P0095734 Ocrl protein_coding protein_coding MGP_LPJ_T0095735.1 MGP_LPJ_G0035574.1 mouse_genomes_project X 43409217 43454620 + Ocrl protein_coding processed_transcript MGP_LPJ_T0095736.1 MGP_LPJ_G0035574.1 mouse_genomes_project X 43409229 43412373 + Ocrl protein_coding retained_intron MGP_LPJ_T0095737.1 MGP_LPJ_G0035574.1 mouse_genomes_project X 43409759 43463680 + MGP_LPJ_P0095737 Ocrl protein_coding protein_coding MGP_LPJ_T0095738.1 MGP_LPJ_G0035574.1 mouse_genomes_project X 43426908 43428051 + Ocrl protein_coding retained_intron MGP_LPJ_T0095739.1 MGP_LPJ_G0035574.1 mouse_genomes_project X 43435121 43446018 + MGP_LPJ_P0095739 Ocrl protein_coding protein_coding MGP_LPJ_T0011219.1 MGP_LPJ_G0009337.1 mouse_genomes_project X 103107851 103107949 - Mir325 miRNA miRNA MGP_LPJ_T0016319.1 MGP_LPJ_G0014410.1 mouse_genomes_project X 56683442 56684502 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016266.1 MGP_LPJ_G0014357.1 mouse_genomes_project X 41533537 41535070 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095809.1 MGP_LPJ_G0035594.1 mouse_genomes_project X 45420419 45421352 - MGP_LPJ_P0095809 Olfr1322 protein_coding protein_coding MGP_LPJ_T0011222.1 MGP_LPJ_G0009340.1 mouse_genomes_project X 132102290 132102372 + Mir3112 miRNA miRNA MGP_LPJ_T0016611.1 MGP_LPJ_G0014702.1 mouse_genomes_project X 110678713 110680259 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016586.1 MGP_LPJ_G0014677.1 mouse_genomes_project X 105137898 105138602 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016568.1 MGP_LPJ_G0014659.1 mouse_genomes_project X 102873736 102874238 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018595.1 MGP_LPJ_G0015704.1 mouse_genomes_project X 99757283 99872051 + Gm14858 processed_transcript processed_transcript MGP_LPJ_T0018596.1 MGP_LPJ_G0015704.1 mouse_genomes_project X 99757412 99762955 + Gm14858 processed_transcript processed_transcript MGP_LPJ_T0016323.1 MGP_LPJ_G0014414.1 mouse_genomes_project X 57071968 57073121 + processed_pseudogene processed_pseudogene MGP_LPJ_T0096438.1 MGP_LPJ_G0035755.1 mouse_genomes_project X 72451322 72545434 - MGP_LPJ_P0096438 Pls3 protein_coding protein_coding MGP_LPJ_T0096439.1 MGP_LPJ_G0035755.1 mouse_genomes_project X 72451331 72544830 - MGP_LPJ_P0096439 Pls3 protein_coding protein_coding MGP_LPJ_T0096440.1 MGP_LPJ_G0035755.1 mouse_genomes_project X 72451331 72497403 - MGP_LPJ_P0096440 Pls3 protein_coding protein_coding MGP_LPJ_T0096441.1 MGP_LPJ_G0035755.1 mouse_genomes_project X 72451336 72513341 - MGP_LPJ_P0096441 Pls3 protein_coding protein_coding MGP_LPJ_T0096442.1 MGP_LPJ_G0035755.1 mouse_genomes_project X 72452439 72513463 - MGP_LPJ_P0096442 Pls3 protein_coding protein_coding MGP_LPJ_T0096443.1 MGP_LPJ_G0035755.1 mouse_genomes_project X 72543651 72545351 - Pls3 protein_coding processed_transcript MGP_LPJ_T0016724.1 MGP_LPJ_G0014815.1 mouse_genomes_project X 137707236 137718194 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016708.1 MGP_LPJ_G0014799.1 mouse_genomes_project X 135279315 135279773 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102516.1 MGP_LPJ_G0040552.1 mouse_genomes_project X 103991824 103996138 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0011209.1 MGP_LPJ_G0009327.1 mouse_genomes_project X 96127617 96127715 - Gm27554 miRNA miRNA MGP_LPJ_T0099951.1 MGP_LPJ_G0038214.1 mouse_genomes_project X 167874741 167874853 - Gm23197 snRNA snRNA MGP_LPJ_T0095273.1 MGP_LPJ_G0035419.1 mouse_genomes_project X 2569541 2574130 + MGP_LPJ_P0095273 Pcsk1n protein_coding protein_coding MGP_LPJ_T0096989.1 MGP_LPJ_G0035929.1 mouse_genomes_project X 109858104 109862908 + MGP_LPJ_P0096989 4933403O08Rik protein_coding protein_coding MGP_LPJ_T0096990.1 MGP_LPJ_G0035929.1 mouse_genomes_project X 109859529 109862908 + MGP_LPJ_P0096990 4933403O08Rik protein_coding protein_coding MGP_LPJ_T0096991.1 MGP_LPJ_G0035929.1 mouse_genomes_project X 109859638 109862835 + MGP_LPJ_P0096991 4933403O08Rik protein_coding protein_coding MGP_LPJ_T0011187.1 MGP_LPJ_G0009305.1 mouse_genomes_project X 63183275 63183333 - Mir465d miRNA miRNA MGP_LPJ_T0096462.1 MGP_LPJ_G0035770.1 mouse_genomes_project X 74857917 74862863 + MGP_LPJ_P0096462 Gm5938 protein_coding protein_coding MGP_LPJ_T0096463.1 MGP_LPJ_G0035770.1 mouse_genomes_project X 74859282 74861930 + Gm5938 protein_coding retained_intron MGP_LPJ_T0016382.1 MGP_LPJ_G0014473.1 mouse_genomes_project X 71107668 71108056 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101192.1 MGP_LPJ_G0039455.1 mouse_genomes_project X 135581846 135581965 + Gm23679 snoRNA snoRNA MGP_LPJ_T0097714.1 MGP_LPJ_G0036134.1 mouse_genomes_project X 161574856 161754778 - MGP_LPJ_P0097714 Reps2 protein_coding protein_coding MGP_LPJ_T0097715.1 MGP_LPJ_G0036134.1 mouse_genomes_project X 161574856 161832636 - MGP_LPJ_P0097715 Reps2 protein_coding protein_coding MGP_LPJ_T0097716.1 MGP_LPJ_G0036134.1 mouse_genomes_project X 161574856 161832684 - MGP_LPJ_P0097716 Reps2 protein_coding protein_coding MGP_LPJ_T0097717.1 MGP_LPJ_G0036134.1 mouse_genomes_project X 161715594 161754876 - Reps2 protein_coding processed_transcript MGP_LPJ_T0097718.1 MGP_LPJ_G0036134.1 mouse_genomes_project X 161734238 161740598 - Reps2 protein_coding retained_intron MGP_LPJ_T0095452.1 MGP_LPJ_G0035478.1 mouse_genomes_project X 15159446 15198442 + MGP_LPJ_P0095452 Chst7 protein_coding protein_coding MGP_LPJ_T0099890.1 MGP_LPJ_G0038153.1 mouse_genomes_project X 41204601 41204708 - Gm25078 snRNA snRNA MGP_LPJ_T0016774.1 MGP_LPJ_G0014865.1 mouse_genomes_project X 144744301 144745347 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016591.1 MGP_LPJ_G0014682.1 mouse_genomes_project X 106858897 106859709 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095433.1 MGP_LPJ_G0035469.1 mouse_genomes_project X 11763603 11831247 + MGP_LPJ_P0095433 Maoa protein_coding protein_coding MGP_LPJ_T0095795.1 MGP_LPJ_G0035590.1 mouse_genomes_project X 44993310 45025833 + MGP_LPJ_P0095795 Arhgap36 protein_coding protein_coding MGP_LPJ_T0095796.1 MGP_LPJ_G0035590.1 mouse_genomes_project X 44999823 45029568 + MGP_LPJ_P0095796 Arhgap36 protein_coding protein_coding MGP_LPJ_T0095797.1 MGP_LPJ_G0035590.1 mouse_genomes_project X 44999950 45029566 + MGP_LPJ_P0095797 Arhgap36 protein_coding protein_coding MGP_LPJ_T0095798.1 MGP_LPJ_G0035590.1 mouse_genomes_project X 45014970 45024574 + Arhgap36 protein_coding processed_transcript MGP_LPJ_T0095799.1 MGP_LPJ_G0035590.1 mouse_genomes_project X 45019820 45028465 + MGP_LPJ_P0095799 Arhgap36 protein_coding unknown_likely_coding MGP_LPJ_T0095800.1 MGP_LPJ_G0035590.1 mouse_genomes_project X 45023200 45024779 + Arhgap36 protein_coding processed_transcript MGP_LPJ_T0016770.1 MGP_LPJ_G0014861.1 mouse_genomes_project X 144482218 144482752 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095190.1 MGP_LPJ_G0035404.1 mouse_genomes_project X 2281441 2284516 - MGP_LPJ_P0095190 Gm6169 protein_coding protein_coding MGP_LPJ_T0097215.1 MGP_LPJ_G0036010.1 mouse_genomes_project X 135137625 135159721 - MGP_LPJ_P0097215 Glra4 protein_coding protein_coding MGP_LPJ_T0097216.1 MGP_LPJ_G0036010.1 mouse_genomes_project X 135146956 135159721 - Glra4 protein_coding retained_intron MGP_LPJ_T0016364.1 MGP_LPJ_G0014455.1 mouse_genomes_project X 66803342 66853563 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095921.1 MGP_LPJ_G0035638.1 mouse_genomes_project X 53322934 53405621 + MGP_LPJ_P0095921 Gm364 protein_coding protein_coding MGP_LPJ_T0009445.1 MGP_LPJ_G0007577.1 mouse_genomes_project X 151168628 151195211 - Kantr lincRNA lincRNA MGP_LPJ_T0009446.1 MGP_LPJ_G0007577.1 mouse_genomes_project X 151168780 151195211 - Kantr lincRNA lincRNA MGP_LPJ_T0009447.1 MGP_LPJ_G0007577.1 mouse_genomes_project X 151168780 151195211 - Kantr lincRNA lincRNA MGP_LPJ_T0009448.1 MGP_LPJ_G0007577.1 mouse_genomes_project X 151168857 151195179 - Kantr lincRNA lincRNA MGP_LPJ_T0009449.1 MGP_LPJ_G0007577.1 mouse_genomes_project X 151183021 151185740 - Kantr lincRNA lincRNA MGP_LPJ_T0009450.1 MGP_LPJ_G0007577.1 mouse_genomes_project X 151183117 151195186 - Kantr lincRNA lincRNA MGP_LPJ_T0009451.1 MGP_LPJ_G0007577.1 mouse_genomes_project X 151187525 151195186 - Kantr lincRNA lincRNA MGP_LPJ_T0096259.1 MGP_LPJ_G0035724.1 mouse_genomes_project X 70848757 70851081 + MGP_LPJ_P0096259 Rpl10 protein_coding protein_coding MGP_LPJ_T0096260.1 MGP_LPJ_G0035724.1 mouse_genomes_project X 70848802 70851082 + MGP_LPJ_P0096260 Rpl10 protein_coding protein_coding MGP_LPJ_T0096261.1 MGP_LPJ_G0035724.1 mouse_genomes_project X 70848803 70850709 + Rpl10 protein_coding processed_transcript MGP_LPJ_T0096262.1 MGP_LPJ_G0035724.1 mouse_genomes_project X 70848805 70851081 + MGP_LPJ_P0096262 Rpl10 protein_coding protein_coding MGP_LPJ_T0096263.1 MGP_LPJ_G0035724.1 mouse_genomes_project X 70848901 70850169 + Rpl10 protein_coding retained_intron MGP_LPJ_T0096264.1 MGP_LPJ_G0035724.1 mouse_genomes_project X 70848924 70851031 + MGP_LPJ_P0096264 Rpl10 protein_coding protein_coding MGP_LPJ_T0096265.1 MGP_LPJ_G0035724.1 mouse_genomes_project X 70848931 70850871 + Rpl10 protein_coding retained_intron MGP_LPJ_T0096266.1 MGP_LPJ_G0035724.1 mouse_genomes_project X 70849354 70850990 + Rpl10 protein_coding retained_intron MGP_LPJ_T0096267.1 MGP_LPJ_G0035724.1 mouse_genomes_project X 70849387 70850189 + Rpl10 protein_coding retained_intron MGP_LPJ_T0096268.1 MGP_LPJ_G0035724.1 mouse_genomes_project X 70849688 70850359 + Rpl10 protein_coding retained_intron MGP_LPJ_T0096269.1 MGP_LPJ_G0035724.1 mouse_genomes_project X 70849782 70850752 + Rpl10 protein_coding retained_intron MGP_LPJ_T0101184.1 MGP_LPJ_G0039447.1 mouse_genomes_project X 127073016 127073148 - Gm26029 snoRNA snoRNA MGP_LPJ_T0101169.1 MGP_LPJ_G0039432.1 mouse_genomes_project X 75271106 75271240 - Gm22843 snoRNA snoRNA MGP_LPJ_T0016340.1 MGP_LPJ_G0014431.1 mouse_genomes_project X 60986695 60987553 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016331.1 MGP_LPJ_G0014422.1 mouse_genomes_project X 58159332 58160562 - processed_pseudogene processed_pseudogene MGP_LPJ_T0063138.1 MGP_LPJ_G0027715.1 mouse_genomes_project 3 111950662 111951234 + Henmt1 protein_coding processed_transcript MGP_LPJ_T0063140.1 MGP_LPJ_G0027715.1 mouse_genomes_project 3 111950848 111955857 + MGP_LPJ_P0063140 Henmt1 protein_coding protein_coding MGP_LPJ_T0063141.1 MGP_LPJ_G0027715.1 mouse_genomes_project 3 111950873 111976363 + MGP_LPJ_P0063141 Henmt1 protein_coding protein_coding MGP_LPJ_T0063142.1 MGP_LPJ_G0027715.1 mouse_genomes_project 3 111950903 111975008 + MGP_LPJ_P0063142 Henmt1 protein_coding protein_coding MGP_LPJ_T0063143.1 MGP_LPJ_G0027715.1 mouse_genomes_project 3 111953623 111976461 + MGP_LPJ_P0063143 Henmt1 protein_coding protein_coding MGP_LPJ_T0063144.1 MGP_LPJ_G0027715.1 mouse_genomes_project 3 111954434 111975902 + MGP_LPJ_P0063144 Henmt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0063145.1 MGP_LPJ_G0027715.1 mouse_genomes_project 3 111954434 111976375 + MGP_LPJ_P0063145 Henmt1 protein_coding protein_coding MGP_LPJ_T0007639.1 MGP_LPJ_G0006248.1 mouse_genomes_project 3 97947595 97953265 + Gm26594 lincRNA lincRNA MGP_LPJ_T0063197.1 MGP_LPJ_G0027729.1 mouse_genomes_project 3 118290590 118511002 + MGP_LPJ_P0063197 Olfm3 protein_coding protein_coding MGP_LPJ_T0063198.1 MGP_LPJ_G0027729.1 mouse_genomes_project 3 118291147 118505280 + MGP_LPJ_P0063198 Olfm3 protein_coding protein_coding MGP_LPJ_T0063199.1 MGP_LPJ_G0027729.1 mouse_genomes_project 3 118464285 118510536 + MGP_LPJ_P0063199 Olfm3 protein_coding protein_coding MGP_LPJ_T0004366.1 MGP_LPJ_G0003816.1 mouse_genomes_project 3 111037211 111039639 + Gm12500 antisense antisense MGP_LPJ_T0004367.1 MGP_LPJ_G0003816.1 mouse_genomes_project 3 111037603 111039637 + Gm12500 antisense antisense MGP_LPJ_T0062107.1 MGP_LPJ_G0027488.1 mouse_genomes_project 3 96700037 96726673 - MGP_LPJ_P0062107 protein_coding protein_coding MGP_LPJ_T0062108.1 MGP_LPJ_G0027488.1 mouse_genomes_project 3 96700037 96726702 - MGP_LPJ_P0062108 protein_coding protein_coding MGP_LPJ_T0062109.1 MGP_LPJ_G0027488.1 mouse_genomes_project 3 96701329 96726620 - MGP_LPJ_P0062109 protein_coding unknown_likely_coding MGP_LPJ_T0062110.1 MGP_LPJ_G0027488.1 mouse_genomes_project 3 96701329 96726620 - MGP_LPJ_P0062110 protein_coding unknown_likely_coding MGP_LPJ_T0062111.1 MGP_LPJ_G0027488.1 mouse_genomes_project 3 96715526 96726677 - MGP_LPJ_P0062111 protein_coding protein_coding MGP_LPJ_T0062112.1 MGP_LPJ_G0027488.1 mouse_genomes_project 3 96715526 96726661 - MGP_LPJ_P0062112 protein_coding protein_coding MGP_LPJ_T0063629.1 MGP_LPJ_G0027806.1 mouse_genomes_project 3 134347827 134402235 + Col25a1 protein_coding processed_transcript MGP_LPJ_T0063630.1 MGP_LPJ_G0027806.1 mouse_genomes_project 3 134400243 134774027 + Col25a1 protein_coding retained_intron MGP_LPJ_T0063631.1 MGP_LPJ_G0027806.1 mouse_genomes_project 3 134400243 134824182 + MGP_LPJ_P0063631 Col25a1 protein_coding protein_coding MGP_LPJ_T0063632.1 MGP_LPJ_G0027806.1 mouse_genomes_project 3 134400243 134819437 + MGP_LPJ_P0063632 Col25a1 protein_coding protein_coding MGP_LPJ_T0063633.1 MGP_LPJ_G0027806.1 mouse_genomes_project 3 134400243 134820626 + MGP_LPJ_P0063633 Col25a1 protein_coding nonsense_mediated_decay MGP_LPJ_T0063634.1 MGP_LPJ_G0027806.1 mouse_genomes_project 3 134400836 134824192 + MGP_LPJ_P0063634 Col25a1 protein_coding unknown_likely_coding MGP_LPJ_T0063635.1 MGP_LPJ_G0027806.1 mouse_genomes_project 3 134638638 134824192 + MGP_LPJ_P0063635 Col25a1 protein_coding unknown_likely_coding MGP_LPJ_T0063636.1 MGP_LPJ_G0027806.1 mouse_genomes_project 3 134706258 134708973 + Col25a1 protein_coding retained_intron MGP_LPJ_T0013908.1 MGP_LPJ_G0011999.1 mouse_genomes_project 3 16375377 16376578 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099411.1 MGP_LPJ_G0037674.1 mouse_genomes_project 3 87346243 87346412 + Gm23850 snRNA snRNA MGP_LPJ_T0063650.1 MGP_LPJ_G0027810.1 mouse_genomes_project 3 135171415 135173388 - MGP_LPJ_P0063650 protein_coding protein_coding MGP_LPJ_T0099396.1 MGP_LPJ_G0037659.1 mouse_genomes_project 3 59846125 59846231 - Gm24382 snRNA snRNA MGP_LPJ_T0063349.1 MGP_LPJ_G0027759.1 mouse_genomes_project 3 125403443 125415948 + MGP_LPJ_P0063349 4930432M17Rik protein_coding protein_coding MGP_LPJ_T0063350.1 MGP_LPJ_G0027759.1 mouse_genomes_project 3 125403998 125415801 + MGP_LPJ_P0063350 4930432M17Rik protein_coding protein_coding MGP_LPJ_T0061361.1 MGP_LPJ_G0027308.1 mouse_genomes_project 3 89013164 89017294 + MGP_LPJ_P0061361 Mrpl24 protein_coding protein_coding MGP_LPJ_T0061362.1 MGP_LPJ_G0027308.1 mouse_genomes_project 3 89013164 89017284 + MGP_LPJ_P0061362 Mrpl24 protein_coding protein_coding MGP_LPJ_T0061363.1 MGP_LPJ_G0027308.1 mouse_genomes_project 3 89013194 89015674 + MGP_LPJ_P0061363 Mrpl24 protein_coding protein_coding MGP_LPJ_T0061364.1 MGP_LPJ_G0027308.1 mouse_genomes_project 3 89013215 89014180 + Mrpl24 protein_coding retained_intron MGP_LPJ_T0061365.1 MGP_LPJ_G0027308.1 mouse_genomes_project 3 89013221 89017294 + MGP_LPJ_P0061365 Mrpl24 protein_coding protein_coding MGP_LPJ_T0061366.1 MGP_LPJ_G0027308.1 mouse_genomes_project 3 89015257 89017294 + MGP_LPJ_P0061366 Mrpl24 protein_coding protein_coding MGP_LPJ_T0014042.1 MGP_LPJ_G0012133.1 mouse_genomes_project 3 63800090 63800380 + processed_pseudogene processed_pseudogene MGP_LPJ_T0061061.1 MGP_LPJ_G0027238.1 mouse_genomes_project 3 74034145 74119733 - MGP_LPJ_P0061061 Bche protein_coding protein_coding MGP_LPJ_T0061062.1 MGP_LPJ_G0027238.1 mouse_genomes_project 3 74057259 74119560 - Bche protein_coding retained_intron MGP_LPJ_T0061063.1 MGP_LPJ_G0027238.1 mouse_genomes_project 3 74112884 74119585 - MGP_LPJ_P0061063 Bche protein_coding protein_coding MGP_LPJ_T0061064.1 MGP_LPJ_G0027238.1 mouse_genomes_project 3 74115369 74119585 - Bche protein_coding processed_transcript MGP_LPJ_T0061033.1 MGP_LPJ_G0027228.1 mouse_genomes_project 3 69193504 69203011 - MGP_LPJ_P0061033 Trim59 protein_coding protein_coding MGP_LPJ_T0061034.1 MGP_LPJ_G0027228.1 mouse_genomes_project 3 69194902 69202971 - MGP_LPJ_P0061034 Trim59 protein_coding protein_coding MGP_LPJ_T0061035.1 MGP_LPJ_G0027228.1 mouse_genomes_project 3 69201781 69202971 - Trim59 protein_coding retained_intron MGP_LPJ_T0061036.1 MGP_LPJ_G0027228.1 mouse_genomes_project 3 69202008 69202979 - Trim59 protein_coding processed_transcript MGP_LPJ_T0098562.1 MGP_LPJ_G0036836.1 mouse_genomes_project 3 106393624 106395047 - Gm43149 sense_intronic sense_intronic MGP_LPJ_T0062489.1 MGP_LPJ_G0027563.1 mouse_genomes_project 3 99082024 99264063 + MGP_LPJ_P0062489 Gja5 protein_coding protein_coding MGP_LPJ_T0062491.1 MGP_LPJ_G0027563.1 mouse_genomes_project 3 99218201 99237605 + MGP_LPJ_P0062491 Gja5 protein_coding protein_coding MGP_LPJ_T0062492.1 MGP_LPJ_G0027563.1 mouse_genomes_project 3 99218201 99240361 + MGP_LPJ_P0062492 Gja5 protein_coding protein_coding MGP_LPJ_T0100682.1 MGP_LPJ_G0038945.1 mouse_genomes_project 3 86913468 86913587 + Gm25876 snoRNA snoRNA MGP_LPJ_T0014211.1 MGP_LPJ_G0012302.1 mouse_genomes_project 3 114964391 114964785 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098532.1 MGP_LPJ_G0036807.1 mouse_genomes_project 3 17539999 17540591 + BC002189 sense_intronic sense_intronic MGP_LPJ_T0007613.1 MGP_LPJ_G0006234.1 mouse_genomes_project 3 86492230 86501302 - Gm42812 lincRNA lincRNA MGP_LPJ_T0061202.1 MGP_LPJ_G0027273.1 mouse_genomes_project 3 84673397 84678894 - MGP_LPJ_P0061202 Tlr2 protein_coding protein_coding MGP_LPJ_T0007460.1 MGP_LPJ_G0006120.1 mouse_genomes_project 3 6097488 6100819 - C230057A21Rik lincRNA lincRNA MGP_LPJ_T0007461.1 MGP_LPJ_G0006120.1 mouse_genomes_project 3 6097683 6100979 - C230057A21Rik lincRNA lincRNA MGP_LPJ_T0060116.1 MGP_LPJ_G0027052.1 mouse_genomes_project 3 26319185 26756709 + MGP_LPJ_P0060116 Tnik protein_coding nonsense_mediated_decay MGP_LPJ_T0060117.1 MGP_LPJ_G0027052.1 mouse_genomes_project 3 26319186 26761982 + MGP_LPJ_P0060117 Tnik protein_coding protein_coding MGP_LPJ_T0060118.1 MGP_LPJ_G0027052.1 mouse_genomes_project 3 26319247 26419532 + Tnik protein_coding retained_intron MGP_LPJ_T0060119.1 MGP_LPJ_G0027052.1 mouse_genomes_project 3 26319247 26559114 + Tnik protein_coding retained_intron MGP_LPJ_T0060120.1 MGP_LPJ_G0027052.1 mouse_genomes_project 3 26319534 26752573 + Tnik protein_coding retained_intron MGP_LPJ_T0060121.1 MGP_LPJ_G0027052.1 mouse_genomes_project 3 26319534 26754347 + MGP_LPJ_P0060121 Tnik protein_coding protein_coding MGP_LPJ_T0060122.1 MGP_LPJ_G0027052.1 mouse_genomes_project 3 26319534 26754347 + MGP_LPJ_P0060122 Tnik protein_coding protein_coding MGP_LPJ_T0060123.1 MGP_LPJ_G0027052.1 mouse_genomes_project 3 26319553 26320802 + Tnik protein_coding retained_intron MGP_LPJ_T0060124.1 MGP_LPJ_G0027052.1 mouse_genomes_project 3 26319614 26754106 + MGP_LPJ_P0060124 Tnik protein_coding protein_coding MGP_LPJ_T0060125.1 MGP_LPJ_G0027052.1 mouse_genomes_project 3 26319614 26754106 + MGP_LPJ_P0060125 Tnik protein_coding protein_coding MGP_LPJ_T0060126.1 MGP_LPJ_G0027052.1 mouse_genomes_project 3 26319614 26754106 + MGP_LPJ_P0060126 Tnik protein_coding protein_coding MGP_LPJ_T0060127.1 MGP_LPJ_G0027052.1 mouse_genomes_project 3 26319614 26754106 + MGP_LPJ_P0060127 Tnik protein_coding protein_coding MGP_LPJ_T0060128.1 MGP_LPJ_G0027052.1 mouse_genomes_project 3 26319614 26754106 + MGP_LPJ_P0060128 Tnik protein_coding protein_coding MGP_LPJ_T0060129.1 MGP_LPJ_G0027052.1 mouse_genomes_project 3 26471833 26666804 + Tnik protein_coding processed_transcript MGP_LPJ_T0060130.1 MGP_LPJ_G0027052.1 mouse_genomes_project 3 26602995 26604810 + Tnik protein_coding retained_intron MGP_LPJ_T0060131.1 MGP_LPJ_G0027052.1 mouse_genomes_project 3 26698915 26708650 + Tnik protein_coding retained_intron MGP_LPJ_T0060132.1 MGP_LPJ_G0027052.1 mouse_genomes_project 3 26735677 26752069 + Tnik protein_coding retained_intron MGP_LPJ_T0060133.1 MGP_LPJ_G0027052.1 mouse_genomes_project 3 26752969 26754873 + Tnik protein_coding retained_intron MGP_LPJ_T0007575.1 MGP_LPJ_G0006202.1 mouse_genomes_project 3 58309343 58410354 + 4930593A02Rik lincRNA lincRNA MGP_LPJ_T0007576.1 MGP_LPJ_G0006202.1 mouse_genomes_project 3 58351390 58421134 + 4930593A02Rik lincRNA lincRNA MGP_LPJ_T0064032.1 MGP_LPJ_G0027887.1 mouse_genomes_project 3 150393302 150425028 + MGP_LPJ_P0064032 Znhit6 protein_coding protein_coding MGP_LPJ_T0064033.1 MGP_LPJ_G0027887.1 mouse_genomes_project 3 150393329 150425710 + MGP_LPJ_P0064033 Znhit6 protein_coding protein_coding MGP_LPJ_T0064034.1 MGP_LPJ_G0027887.1 mouse_genomes_project 3 150393344 150395628 + MGP_LPJ_P0064034 Znhit6 protein_coding protein_coding MGP_LPJ_T0064035.1 MGP_LPJ_G0027887.1 mouse_genomes_project 3 150393355 150415172 + MGP_LPJ_P0064035 Znhit6 protein_coding protein_coding MGP_LPJ_T0064036.1 MGP_LPJ_G0027887.1 mouse_genomes_project 3 150393371 150401640 + MGP_LPJ_P0064036 Znhit6 protein_coding nonsense_mediated_decay MGP_LPJ_T0064037.1 MGP_LPJ_G0027887.1 mouse_genomes_project 3 150393433 150413616 + MGP_LPJ_P0064037 Znhit6 protein_coding protein_coding MGP_LPJ_T0064038.1 MGP_LPJ_G0027887.1 mouse_genomes_project 3 150416374 150424927 + Znhit6 protein_coding retained_intron MGP_LPJ_T0062604.1 MGP_LPJ_G0027596.1 mouse_genomes_project 3 103422049 103432484 + MGP_LPJ_P0062604 Trim45 protein_coding protein_coding MGP_LPJ_T0062605.1 MGP_LPJ_G0027596.1 mouse_genomes_project 3 103422322 103434793 + MGP_LPJ_P0062605 Trim45 protein_coding protein_coding MGP_LPJ_T0062606.1 MGP_LPJ_G0027596.1 mouse_genomes_project 3 103422340 103437702 + MGP_LPJ_P0062606 Trim45 protein_coding protein_coding MGP_LPJ_T0062607.1 MGP_LPJ_G0027596.1 mouse_genomes_project 3 103422759 103432839 + MGP_LPJ_P0062607 Trim45 protein_coding protein_coding MGP_LPJ_T0010544.1 MGP_LPJ_G0008662.1 mouse_genomes_project 3 89330469 89330556 + Mir3093 miRNA miRNA MGP_LPJ_T0014073.1 MGP_LPJ_G0012164.1 mouse_genomes_project 3 71659841 71660298 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004219.1 MGP_LPJ_G0003719.1 mouse_genomes_project 3 4935704 5019480 + Gm16685 antisense antisense MGP_LPJ_T0060889.1 MGP_LPJ_G0027196.1 mouse_genomes_project 3 62308679 62352175 - MGP_LPJ_P0060889 Dhx36 protein_coding protein_coding MGP_LPJ_T0060890.1 MGP_LPJ_G0027196.1 mouse_genomes_project 3 62311311 62313254 - Dhx36 protein_coding retained_intron MGP_LPJ_T0060891.1 MGP_LPJ_G0027196.1 mouse_genomes_project 3 62325407 62329845 - Dhx36 protein_coding retained_intron MGP_LPJ_T0060892.1 MGP_LPJ_G0027196.1 mouse_genomes_project 3 62339151 62343352 - Dhx36 protein_coding retained_intron MGP_LPJ_T0100684.1 MGP_LPJ_G0038947.1 mouse_genomes_project 3 87110306 87110374 - Snord73a snoRNA snoRNA MGP_LPJ_T0004396.1 MGP_LPJ_G0003841.1 mouse_genomes_project 3 135368538 135373126 - Gm43352 antisense antisense MGP_LPJ_T0001163.1 MGP_LPJ_G0001085.1 mouse_genomes_project 3 28655632 28656500 + TEC TEC MGP_LPJ_T0063201.1 MGP_LPJ_G0027731.1 mouse_genomes_project 3 119302567 119333896 + MGP_LPJ_P0063201 Dph5 protein_coding protein_coding MGP_LPJ_T0063202.1 MGP_LPJ_G0027731.1 mouse_genomes_project 3 119302582 119303209 + MGP_LPJ_P0063202 Dph5 protein_coding protein_coding MGP_LPJ_T0063203.1 MGP_LPJ_G0027731.1 mouse_genomes_project 3 119302876 119315687 + MGP_LPJ_P0063203 Dph5 protein_coding protein_coding MGP_LPJ_T0063204.1 MGP_LPJ_G0027731.1 mouse_genomes_project 3 119302894 119341127 + MGP_LPJ_P0063204 Dph5 protein_coding nonsense_mediated_decay MGP_LPJ_T0063205.1 MGP_LPJ_G0027731.1 mouse_genomes_project 3 119302902 119317051 + MGP_LPJ_P0063205 Dph5 protein_coding protein_coding MGP_LPJ_T0063206.1 MGP_LPJ_G0027731.1 mouse_genomes_project 3 119302912 119334069 + MGP_LPJ_P0063206 Dph5 protein_coding protein_coding MGP_LPJ_T0063207.1 MGP_LPJ_G0027731.1 mouse_genomes_project 3 119302923 119307001 + Dph5 protein_coding retained_intron MGP_LPJ_T0063208.1 MGP_LPJ_G0027731.1 mouse_genomes_project 3 119302924 119307714 + Dph5 protein_coding retained_intron MGP_LPJ_T0013932.1 MGP_LPJ_G0012023.1 mouse_genomes_project 3 25303495 25303764 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098558.1 MGP_LPJ_G0036832.1 mouse_genomes_project 3 105066333 105069239 + Gm42679 sense_intronic sense_intronic MGP_LPJ_T0060803.1 MGP_LPJ_G0027174.1 mouse_genomes_project 3 58110520 58146569 + MGP_LPJ_P0060803 Eif2a protein_coding protein_coding MGP_LPJ_T0060804.1 MGP_LPJ_G0027174.1 mouse_genomes_project 3 58110741 58134910 + Eif2a protein_coding retained_intron MGP_LPJ_T0060805.1 MGP_LPJ_G0027174.1 mouse_genomes_project 3 58110742 58144712 + MGP_LPJ_P0060805 Eif2a protein_coding nonsense_mediated_decay MGP_LPJ_T0060806.1 MGP_LPJ_G0027174.1 mouse_genomes_project 3 58110755 58146569 + MGP_LPJ_P0060806 Eif2a protein_coding nonsense_mediated_decay MGP_LPJ_T0060807.1 MGP_LPJ_G0027174.1 mouse_genomes_project 3 58111002 58134732 + MGP_LPJ_P0060807 Eif2a protein_coding protein_coding MGP_LPJ_T0060808.1 MGP_LPJ_G0027174.1 mouse_genomes_project 3 58130242 58134910 + Eif2a protein_coding retained_intron MGP_LPJ_T0060809.1 MGP_LPJ_G0027174.1 mouse_genomes_project 3 58133353 58139685 + Eif2a protein_coding retained_intron MGP_LPJ_T0014305.1 MGP_LPJ_G0012396.1 mouse_genomes_project 3 143109685 143109874 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007647.1 MGP_LPJ_G0006255.1 mouse_genomes_project 3 98617137 98637864 + lincRNA lincRNA MGP_LPJ_T0001342.1 MGP_LPJ_G0001262.1 mouse_genomes_project 3 127010873 127013474 - TEC TEC MGP_LPJ_T0098567.1 MGP_LPJ_G0036841.1 mouse_genomes_project 3 106718683 106719751 - 9530097N15Rik sense_intronic sense_intronic MGP_LPJ_T0001316.1 MGP_LPJ_G0001236.1 mouse_genomes_project 3 111246916 111252141 + TEC TEC MGP_LPJ_T0061367.1 MGP_LPJ_G0027309.1 mouse_genomes_project 3 89016222 89023531 - Rrnad1 protein_coding retained_intron MGP_LPJ_T0061368.1 MGP_LPJ_G0027309.1 mouse_genomes_project 3 89016222 89023531 - MGP_LPJ_P0061368 Rrnad1 protein_coding nonsense_mediated_decay MGP_LPJ_T0061369.1 MGP_LPJ_G0027309.1 mouse_genomes_project 3 89016526 89023548 - MGP_LPJ_P0061369 Rrnad1 protein_coding protein_coding MGP_LPJ_T0061370.1 MGP_LPJ_G0027309.1 mouse_genomes_project 3 89016937 89022765 - Rrnad1 protein_coding retained_intron MGP_LPJ_T0061371.1 MGP_LPJ_G0027309.1 mouse_genomes_project 3 89017279 89021662 - MGP_LPJ_P0061371 Rrnad1 protein_coding protein_coding MGP_LPJ_T0061372.1 MGP_LPJ_G0027309.1 mouse_genomes_project 3 89017280 89018897 - Rrnad1 protein_coding processed_transcript MGP_LPJ_T0061373.1 MGP_LPJ_G0027309.1 mouse_genomes_project 3 89017284 89023548 - Rrnad1 protein_coding retained_intron MGP_LPJ_T0061374.1 MGP_LPJ_G0027309.1 mouse_genomes_project 3 89017284 89024121 - Rrnad1 protein_coding retained_intron MGP_LPJ_T0061375.1 MGP_LPJ_G0027309.1 mouse_genomes_project 3 89017404 89023987 - MGP_LPJ_P0061375 Rrnad1 protein_coding protein_coding MGP_LPJ_T0061376.1 MGP_LPJ_G0027309.1 mouse_genomes_project 3 89018674 89020496 - Rrnad1 protein_coding retained_intron MGP_LPJ_T0061377.1 MGP_LPJ_G0027309.1 mouse_genomes_project 3 89018847 89021112 - Rrnad1 protein_coding processed_transcript MGP_LPJ_T0061378.1 MGP_LPJ_G0027309.1 mouse_genomes_project 3 89018877 89023542 - MGP_LPJ_P0061378 Rrnad1 protein_coding nonsense_mediated_decay MGP_LPJ_T0007664.1 MGP_LPJ_G0006270.1 mouse_genomes_project 3 105644283 105645601 + Gm43062 lincRNA lincRNA MGP_LPJ_T0062399.1 MGP_LPJ_G0027535.1 mouse_genomes_project 3 98289405 98295706 + MGP_LPJ_P0062399 protein_coding protein_coding MGP_LPJ_T0062400.1 MGP_LPJ_G0027535.1 mouse_genomes_project 3 98289650 98290572 + protein_coding retained_intron MGP_LPJ_T0099441.1 MGP_LPJ_G0037704.1 mouse_genomes_project 3 127226873 127227003 - Gm22713 snRNA snRNA MGP_LPJ_T0062519.1 MGP_LPJ_G0027570.1 mouse_genomes_project 3 99871571 99884182 + MGP_LPJ_P0062519 Prkab2 protein_coding nonsense_mediated_decay MGP_LPJ_T0062520.1 MGP_LPJ_G0027570.1 mouse_genomes_project 3 99871590 99887195 + MGP_LPJ_P0062520 Prkab2 protein_coding protein_coding MGP_LPJ_T0062521.1 MGP_LPJ_G0027570.1 mouse_genomes_project 3 99871592 99884316 + MGP_LPJ_P0062521 Prkab2 protein_coding nonsense_mediated_decay MGP_LPJ_T0062522.1 MGP_LPJ_G0027570.1 mouse_genomes_project 3 99879912 99886488 + Prkab2 protein_coding retained_intron MGP_LPJ_T0062523.1 MGP_LPJ_G0027570.1 mouse_genomes_project 3 99880722 99886464 + Prkab2 protein_coding retained_intron MGP_LPJ_T0062524.1 MGP_LPJ_G0027570.1 mouse_genomes_project 3 99883580 99884431 + Prkab2 protein_coding processed_transcript MGP_LPJ_T0099398.1 MGP_LPJ_G0037661.1 mouse_genomes_project 3 63657893 63657991 + Gm23500 snRNA snRNA MGP_LPJ_T0014081.1 MGP_LPJ_G0012172.1 mouse_genomes_project 3 74358824 74359901 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007795.1 MGP_LPJ_G0006374.1 mouse_genomes_project 3 158415224 158435149 - Gm43832 lincRNA lincRNA MGP_LPJ_T0007796.1 MGP_LPJ_G0006374.1 mouse_genomes_project 3 158418738 158427754 - Gm43832 lincRNA lincRNA MGP_LPJ_T0014262.1 MGP_LPJ_G0012353.1 mouse_genomes_project 3 133441290 133442054 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007492.1 MGP_LPJ_G0006139.1 mouse_genomes_project 3 19859185 19859976 - Gm43674 lincRNA lincRNA MGP_LPJ_T0017900.1 MGP_LPJ_G0015419.1 mouse_genomes_project 3 50794958 50802036 + 5031434O11Rik processed_transcript antisense MGP_LPJ_T0017901.1 MGP_LPJ_G0015419.1 mouse_genomes_project 3 50797394 50802024 + 5031434O11Rik processed_transcript antisense MGP_LPJ_T0017902.1 MGP_LPJ_G0015419.1 mouse_genomes_project 3 50798564 50802030 + 5031434O11Rik processed_transcript retained_intron MGP_LPJ_T0102126.1 MGP_LPJ_G0040163.1 mouse_genomes_project 3 125884441 125996816 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0064192.1 MGP_LPJ_G0027916.1 mouse_genomes_project 3 157465242 157494783 - MGP_LPJ_P0064192 Nexn protein_coding protein_coding MGP_LPJ_T0064193.1 MGP_LPJ_G0027916.1 mouse_genomes_project 3 157465449 157483992 - MGP_LPJ_P0064193 Nexn protein_coding protein_coding MGP_LPJ_T0064194.1 MGP_LPJ_G0027916.1 mouse_genomes_project 3 157465497 157476097 - MGP_LPJ_P0064194 Nexn protein_coding protein_coding MGP_LPJ_T0064195.1 MGP_LPJ_G0027916.1 mouse_genomes_project 3 157465534 157483992 - MGP_LPJ_P0064195 Nexn protein_coding protein_coding MGP_LPJ_T0064196.1 MGP_LPJ_G0027916.1 mouse_genomes_project 3 157466135 157472661 - Nexn protein_coding processed_transcript MGP_LPJ_T0064197.1 MGP_LPJ_G0027916.1 mouse_genomes_project 3 157470586 157471983 - Nexn protein_coding retained_intron MGP_LPJ_T0064198.1 MGP_LPJ_G0027916.1 mouse_genomes_project 3 157471802 157494233 - MGP_LPJ_P0064198 Nexn protein_coding protein_coding MGP_LPJ_T0064199.1 MGP_LPJ_G0027916.1 mouse_genomes_project 3 157471858 157484046 - MGP_LPJ_P0064199 Nexn protein_coding protein_coding MGP_LPJ_T0064200.1 MGP_LPJ_G0027916.1 mouse_genomes_project 3 157475853 157476297 - Nexn protein_coding retained_intron MGP_LPJ_T0064201.1 MGP_LPJ_G0027916.1 mouse_genomes_project 3 157475864 157494260 - MGP_LPJ_P0064201 Nexn protein_coding nonsense_mediated_decay MGP_LPJ_T0064202.1 MGP_LPJ_G0027916.1 mouse_genomes_project 3 157475895 157491966 - MGP_LPJ_P0064202 Nexn protein_coding protein_coding MGP_LPJ_T0064203.1 MGP_LPJ_G0027916.1 mouse_genomes_project 3 157475913 157490002 - MGP_LPJ_P0064203 Nexn protein_coding protein_coding MGP_LPJ_T0064204.1 MGP_LPJ_G0027916.1 mouse_genomes_project 3 157476015 157490990 - MGP_LPJ_P0064204 Nexn protein_coding protein_coding MGP_LPJ_T0064205.1 MGP_LPJ_G0027916.1 mouse_genomes_project 3 157481411 157494815 - Nexn protein_coding retained_intron MGP_LPJ_T0064206.1 MGP_LPJ_G0027916.1 mouse_genomes_project 3 157481624 157481993 - Nexn protein_coding retained_intron MGP_LPJ_T0064045.1 MGP_LPJ_G0027891.1 mouse_genomes_project 3 150788778 150795595 + MGP_LPJ_P0064045 2410004B18Rik protein_coding protein_coding MGP_LPJ_T0064046.1 MGP_LPJ_G0027891.1 mouse_genomes_project 3 150788806 150795593 + MGP_LPJ_P0064046 2410004B18Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0064047.1 MGP_LPJ_G0027891.1 mouse_genomes_project 3 150788954 150794576 + MGP_LPJ_P0064047 2410004B18Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0064048.1 MGP_LPJ_G0027891.1 mouse_genomes_project 3 150789000 150789552 + 2410004B18Rik protein_coding retained_intron MGP_LPJ_T0064049.1 MGP_LPJ_G0027891.1 mouse_genomes_project 3 150789049 150795008 + MGP_LPJ_P0064049 2410004B18Rik protein_coding protein_coding MGP_LPJ_T0064050.1 MGP_LPJ_G0027891.1 mouse_genomes_project 3 150789408 150794619 + 2410004B18Rik protein_coding retained_intron MGP_LPJ_T0064051.1 MGP_LPJ_G0027891.1 mouse_genomes_project 3 150789850 150794964 + MGP_LPJ_P0064051 2410004B18Rik protein_coding protein_coding MGP_LPJ_T0013924.1 MGP_LPJ_G0012015.1 mouse_genomes_project 3 20392232 20393567 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014251.1 MGP_LPJ_G0012342.1 mouse_genomes_project 3 127618845 127619449 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013887.1 MGP_LPJ_G0011978.1 mouse_genomes_project 3 10480551 10481504 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014002.1 MGP_LPJ_G0012093.1 mouse_genomes_project 3 51508371 51509123 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001185.1 MGP_LPJ_G0001107.1 mouse_genomes_project 3 35969585 35972049 + TEC TEC MGP_LPJ_T0001423.1 MGP_LPJ_G0001342.1 mouse_genomes_project 3 162456477 162459652 + TEC TEC MGP_LPJ_T0060794.1 MGP_LPJ_G0027171.1 mouse_genomes_project 3 57398820 57405005 - MGP_LPJ_P0060794 Pfn2 protein_coding protein_coding MGP_LPJ_T0060795.1 MGP_LPJ_G0027171.1 mouse_genomes_project 3 57398830 57404071 - MGP_LPJ_P0060795 Pfn2 protein_coding protein_coding MGP_LPJ_T0060796.1 MGP_LPJ_G0027171.1 mouse_genomes_project 3 57400033 57402804 - MGP_LPJ_P0060796 Pfn2 protein_coding protein_coding MGP_LPJ_T0060797.1 MGP_LPJ_G0027171.1 mouse_genomes_project 3 57401586 57404475 - MGP_LPJ_P0060797 Pfn2 protein_coding protein_coding MGP_LPJ_T0098536.1 MGP_LPJ_G0036811.1 mouse_genomes_project 3 86503944 86521821 - Gm15535 sense_intronic sense_intronic MGP_LPJ_T0098537.1 MGP_LPJ_G0036811.1 mouse_genomes_project 3 86506077 86521730 - Gm15535 sense_intronic sense_intronic MGP_LPJ_T0102116.1 MGP_LPJ_G0040153.1 mouse_genomes_project 3 101227516 101229453 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0007722.1 MGP_LPJ_G0006315.1 mouse_genomes_project 3 135958550 136237253 + lincRNA lincRNA MGP_LPJ_T0001181.1 MGP_LPJ_G0001103.1 mouse_genomes_project 3 34486754 34487553 - TEC TEC MGP_LPJ_T0063409.1 MGP_LPJ_G0027771.1 mouse_genomes_project 3 126733019 126734843 + MGP_LPJ_P0063409 1810037I17Rik protein_coding protein_coding MGP_LPJ_T0001358.1 MGP_LPJ_G0001278.1 mouse_genomes_project 3 130984427 130985313 - TEC TEC MGP_LPJ_T0014056.1 MGP_LPJ_G0012147.1 mouse_genomes_project 3 67695988 67696564 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060516.1 MGP_LPJ_G0027121.1 mouse_genomes_project 3 39622583 39624879 - MGP_LPJ_P0060516 1700034I23Rik protein_coding protein_coding MGP_LPJ_T0004426.1 MGP_LPJ_G0003861.1 mouse_genomes_project 3 157904343 157918730 + AI115009 antisense antisense MGP_LPJ_T0059960.1 MGP_LPJ_G0027014.1 mouse_genomes_project 3 12485228 12521277 - MGP_LPJ_P0059960 Car1 protein_coding protein_coding MGP_LPJ_T0059961.1 MGP_LPJ_G0027014.1 mouse_genomes_project 3 12485228 12554326 - MGP_LPJ_P0059961 Car1 protein_coding protein_coding MGP_LPJ_T0059962.1 MGP_LPJ_G0027014.1 mouse_genomes_project 3 12489786 12554329 - MGP_LPJ_P0059962 Car1 protein_coding protein_coding MGP_LPJ_T0001262.1 MGP_LPJ_G0001182.1 mouse_genomes_project 3 60304128 60308122 + TEC TEC MGP_LPJ_T0001376.1 MGP_LPJ_G0001295.1 mouse_genomes_project 3 134786001 134788140 + TEC TEC MGP_LPJ_T0011551.1 MGP_LPJ_G0009669.1 mouse_genomes_project 3 33116061 33116169 + Gm27611 misc_RNA misc_RNA MGP_LPJ_T0001367.1 MGP_LPJ_G0001287.1 mouse_genomes_project 3 131782267 131784253 - TEC TEC MGP_LPJ_T0100668.1 MGP_LPJ_G0038931.1 mouse_genomes_project 3 50023567 50023702 - Gm24503 snoRNA snoRNA MGP_LPJ_T0060780.1 MGP_LPJ_G0027169.1 mouse_genomes_project 3 57202702 57232347 - MGP_LPJ_P0060780 protein_coding nonsense_mediated_decay MGP_LPJ_T0060781.1 MGP_LPJ_G0027169.1 mouse_genomes_project 3 57209619 57232083 - MGP_LPJ_P0060781 protein_coding protein_coding MGP_LPJ_T0060782.1 MGP_LPJ_G0027169.1 mouse_genomes_project 3 57211456 57232085 - MGP_LPJ_P0060782 protein_coding protein_coding MGP_LPJ_T0014045.1 MGP_LPJ_G0012136.1 mouse_genomes_project 3 65652852 65653659 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013858.1 MGP_LPJ_G0011949.1 mouse_genomes_project 3 3576413 3576533 - processed_pseudogene processed_pseudogene MGP_LPJ_T0063838.1 MGP_LPJ_G0027846.1 mouse_genomes_project 3 142368267 142422423 - MGP_LPJ_P0063838 Dapp1 protein_coding protein_coding MGP_LPJ_T0063839.1 MGP_LPJ_G0027846.1 mouse_genomes_project 3 142368268 142422414 - MGP_LPJ_P0063839 Dapp1 protein_coding protein_coding MGP_LPJ_T0063840.1 MGP_LPJ_G0027846.1 mouse_genomes_project 3 142369961 142394150 - Dapp1 protein_coding processed_transcript MGP_LPJ_T0063841.1 MGP_LPJ_G0027846.1 mouse_genomes_project 3 142370264 142392996 - Dapp1 protein_coding processed_transcript MGP_LPJ_T0063842.1 MGP_LPJ_G0027846.1 mouse_genomes_project 3 142370375 142422408 - Dapp1 protein_coding processed_transcript MGP_LPJ_T0063843.1 MGP_LPJ_G0027846.1 mouse_genomes_project 3 142388008 142392996 - Dapp1 protein_coding processed_transcript MGP_LPJ_T0063844.1 MGP_LPJ_G0027846.1 mouse_genomes_project 3 142421582 142422414 - Dapp1 protein_coding retained_intron MGP_LPJ_T0001352.1 MGP_LPJ_G0001272.1 mouse_genomes_project 3 130638661 130642738 + TEC TEC MGP_LPJ_T0013937.1 MGP_LPJ_G0012028.1 mouse_genomes_project 3 29031405 29031673 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060155.1 MGP_LPJ_G0027057.1 mouse_genomes_project 3 28102051 28165889 - MGP_LPJ_P0060155 Mecom protein_coding protein_coding MGP_LPJ_T0060156.1 MGP_LPJ_G0027057.1 mouse_genomes_project 3 28102054 28677973 - MGP_LPJ_P0060156 Mecom protein_coding protein_coding MGP_LPJ_T0060157.1 MGP_LPJ_G0027057.1 mouse_genomes_project 3 28102061 28166238 - MGP_LPJ_P0060157 Mecom protein_coding protein_coding MGP_LPJ_T0060158.1 MGP_LPJ_G0027057.1 mouse_genomes_project 3 28102062 28289697 - MGP_LPJ_P0060158 Mecom protein_coding protein_coding MGP_LPJ_T0060159.1 MGP_LPJ_G0027057.1 mouse_genomes_project 3 28103322 28391803 - MGP_LPJ_P0060159 Mecom protein_coding protein_coding MGP_LPJ_T0060160.1 MGP_LPJ_G0027057.1 mouse_genomes_project 3 28103471 28148911 - MGP_LPJ_P0060160 Mecom protein_coding protein_coding MGP_LPJ_T0060161.1 MGP_LPJ_G0027057.1 mouse_genomes_project 3 28103537 28148950 - MGP_LPJ_P0060161 Mecom protein_coding protein_coding MGP_LPJ_T0060162.1 MGP_LPJ_G0027057.1 mouse_genomes_project 3 28113829 28677754 - MGP_LPJ_P0060162 Mecom protein_coding protein_coding MGP_LPJ_T0060163.1 MGP_LPJ_G0027057.1 mouse_genomes_project 3 28116211 28678062 - MGP_LPJ_P0060163 Mecom protein_coding protein_coding MGP_LPJ_T0060164.1 MGP_LPJ_G0027057.1 mouse_genomes_project 3 28128099 28719670 - MGP_LPJ_P0060164 Mecom protein_coding nonsense_mediated_decay MGP_LPJ_T0060165.1 MGP_LPJ_G0027057.1 mouse_genomes_project 3 28134712 28165794 - Mecom protein_coding processed_transcript MGP_LPJ_T0060166.1 MGP_LPJ_G0027057.1 mouse_genomes_project 3 28134712 28165937 - Mecom protein_coding retained_intron MGP_LPJ_T0060167.1 MGP_LPJ_G0027057.1 mouse_genomes_project 3 28148976 28164172 - MGP_LPJ_P0060167 Mecom protein_coding protein_coding MGP_LPJ_T0060168.1 MGP_LPJ_G0027057.1 mouse_genomes_project 3 28168756 28677973 - Mecom protein_coding processed_transcript MGP_LPJ_T0060169.1 MGP_LPJ_G0027057.1 mouse_genomes_project 3 28389083 28391601 - Mecom protein_coding retained_intron MGP_LPJ_T0060170.1 MGP_LPJ_G0027057.1 mouse_genomes_project 3 28390209 28677727 - Mecom protein_coding processed_transcript MGP_LPJ_T0060171.1 MGP_LPJ_G0027057.1 mouse_genomes_project 3 28391612 28391960 - MGP_LPJ_P0060171 Mecom protein_coding protein_coding MGP_LPJ_T0100693.1 MGP_LPJ_G0038956.1 mouse_genomes_project 3 97069166 97069251 - Gm24920 snoRNA snoRNA MGP_LPJ_T0014087.1 MGP_LPJ_G0012178.1 mouse_genomes_project 3 77367653 77367992 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100710.1 MGP_LPJ_G0038973.1 mouse_genomes_project 3 127356635 127356765 - Snora24 snoRNA snoRNA MGP_LPJ_T0001320.1 MGP_LPJ_G0001240.1 mouse_genomes_project 3 114943268 114944879 + TEC TEC MGP_LPJ_T0064006.1 MGP_LPJ_G0027884.1 mouse_genomes_project 3 149855470 149888496 - MGP_LPJ_P0064006 Clca2 protein_coding protein_coding MGP_LPJ_T0064007.1 MGP_LPJ_G0027884.1 mouse_genomes_project 3 149857821 149888498 - MGP_LPJ_P0064007 Clca2 protein_coding protein_coding MGP_LPJ_T0064008.1 MGP_LPJ_G0027884.1 mouse_genomes_project 3 149888235 149888835 - Clca2 protein_coding processed_transcript MGP_LPJ_T0061769.1 MGP_LPJ_G0027380.1 mouse_genomes_project 3 91020152 91021820 + Adar protein_coding retained_intron MGP_LPJ_T0061770.1 MGP_LPJ_G0027380.1 mouse_genomes_project 3 91020462 91040272 + Adar protein_coding processed_transcript MGP_LPJ_T0061771.1 MGP_LPJ_G0027380.1 mouse_genomes_project 3 91035866 91057374 + MGP_LPJ_P0061771 Adar protein_coding protein_coding MGP_LPJ_T0061772.1 MGP_LPJ_G0027380.1 mouse_genomes_project 3 91035866 91057374 + MGP_LPJ_P0061772 Adar protein_coding protein_coding MGP_LPJ_T0061773.1 MGP_LPJ_G0027380.1 mouse_genomes_project 3 91035866 91057374 + MGP_LPJ_P0061773 Adar protein_coding protein_coding MGP_LPJ_T0061774.1 MGP_LPJ_G0027380.1 mouse_genomes_project 3 91035929 91057143 + MGP_LPJ_P0061774 Adar protein_coding protein_coding MGP_LPJ_T0061775.1 MGP_LPJ_G0027380.1 mouse_genomes_project 3 91042704 91044408 + Adar protein_coding retained_intron MGP_LPJ_T0061776.1 MGP_LPJ_G0027380.1 mouse_genomes_project 3 91051359 91052926 + Adar protein_coding retained_intron MGP_LPJ_T0061330.1 MGP_LPJ_G0027302.1 mouse_genomes_project 3 88830998 88853981 - MGP_LPJ_P0061330 Pear1 protein_coding nonsense_mediated_decay MGP_LPJ_T0061331.1 MGP_LPJ_G0027302.1 mouse_genomes_project 3 88832202 88853986 - MGP_LPJ_P0061331 Pear1 protein_coding protein_coding MGP_LPJ_T0061332.1 MGP_LPJ_G0027302.1 mouse_genomes_project 3 88832202 88911492 - MGP_LPJ_P0061332 Pear1 protein_coding protein_coding MGP_LPJ_T0061333.1 MGP_LPJ_G0027302.1 mouse_genomes_project 3 88832202 88911441 - MGP_LPJ_P0061333 Pear1 protein_coding protein_coding MGP_LPJ_T0061334.1 MGP_LPJ_G0027302.1 mouse_genomes_project 3 88832203 88846491 - Pear1 protein_coding retained_intron MGP_LPJ_T0061335.1 MGP_LPJ_G0027302.1 mouse_genomes_project 3 88832203 88853976 - MGP_LPJ_P0061335 Pear1 protein_coding protein_coding MGP_LPJ_T0061336.1 MGP_LPJ_G0027302.1 mouse_genomes_project 3 88832203 88853982 - MGP_LPJ_P0061336 Pear1 protein_coding nonsense_mediated_decay MGP_LPJ_T0061337.1 MGP_LPJ_G0027302.1 mouse_genomes_project 3 88832211 88837430 - Pear1 protein_coding retained_intron MGP_LPJ_T0061338.1 MGP_LPJ_G0027302.1 mouse_genomes_project 3 88833005 88853976 - MGP_LPJ_P0061338 Pear1 protein_coding protein_coding MGP_LPJ_T0061339.1 MGP_LPJ_G0027302.1 mouse_genomes_project 3 88834568 88837059 - MGP_LPJ_P0061339 Pear1 protein_coding nonsense_mediated_decay MGP_LPJ_T0061340.1 MGP_LPJ_G0027302.1 mouse_genomes_project 3 88835549 88840047 - MGP_LPJ_P0061340 Pear1 protein_coding nonsense_mediated_decay MGP_LPJ_T0061341.1 MGP_LPJ_G0027302.1 mouse_genomes_project 3 88839745 88853976 - MGP_LPJ_P0061341 Pear1 protein_coding nonsense_mediated_decay MGP_LPJ_T0061342.1 MGP_LPJ_G0027302.1 mouse_genomes_project 3 88841054 88853988 - Pear1 protein_coding retained_intron MGP_LPJ_T0061343.1 MGP_LPJ_G0027302.1 mouse_genomes_project 3 88841494 88853976 - MGP_LPJ_P0061343 Pear1 protein_coding protein_coding MGP_LPJ_T0061344.1 MGP_LPJ_G0027302.1 mouse_genomes_project 3 88841507 88853976 - MGP_LPJ_P0061344 Pear1 protein_coding nonsense_mediated_decay MGP_LPJ_T0061345.1 MGP_LPJ_G0027302.1 mouse_genomes_project 3 88841521 88853999 - MGP_LPJ_P0061345 Pear1 protein_coding protein_coding MGP_LPJ_T0061346.1 MGP_LPJ_G0027302.1 mouse_genomes_project 3 88843732 88853968 - MGP_LPJ_P0061346 Pear1 protein_coding protein_coding MGP_LPJ_T0063262.1 MGP_LPJ_G0027743.1 mouse_genomes_project 3 120093637 120134746 - MGP_LPJ_P0063262 Gm43191 protein_coding protein_coding MGP_LPJ_T0063816.1 MGP_LPJ_G0027841.1 mouse_genomes_project 3 142048085 142051859 + Ddit4l protein_coding processed_transcript MGP_LPJ_T0063817.1 MGP_LPJ_G0027841.1 mouse_genomes_project 3 142050136 142054811 + MGP_LPJ_P0063817 Ddit4l protein_coding protein_coding MGP_LPJ_T0063818.1 MGP_LPJ_G0027841.1 mouse_genomes_project 3 142050501 142052634 + MGP_LPJ_P0063818 Ddit4l protein_coding protein_coding MGP_LPJ_T0001281.1 MGP_LPJ_G0001201.1 mouse_genomes_project 3 78284534 78286037 - TEC TEC MGP_LPJ_T0013930.1 MGP_LPJ_G0012021.1 mouse_genomes_project 3 25029050 25030215 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001300.1 MGP_LPJ_G0001220.1 mouse_genomes_project 3 98631253 98634118 - TEC TEC MGP_LPJ_T0009480.1 MGP_LPJ_G0007598.1 mouse_genomes_project 3 149708070 149768559 + macro_lncRNA macro_lncRNA MGP_LPJ_T0014189.1 MGP_LPJ_G0012280.1 mouse_genomes_project 3 107661542 107661797 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017920.1 MGP_LPJ_G0015428.1 mouse_genomes_project 3 98374929 98376588 - Gm20627 processed_transcript lincRNA MGP_LPJ_T0017921.1 MGP_LPJ_G0015428.1 mouse_genomes_project 3 98374931 98375780 - Gm20627 processed_transcript retained_intron MGP_LPJ_T0007486.1 MGP_LPJ_G0006134.1 mouse_genomes_project 3 16280138 16292330 - 4930433B08Rik lincRNA lincRNA MGP_LPJ_T0064100.1 MGP_LPJ_G0027904.1 mouse_genomes_project 3 151557444 151563588 - MGP_LPJ_P0064100 4930503B20Rik protein_coding protein_coding MGP_LPJ_T0064105.1 MGP_LPJ_G0027904.1 mouse_genomes_project 3 151558529 151560577 - 4930503B20Rik protein_coding processed_transcript MGP_LPJ_T0064106.1 MGP_LPJ_G0027904.1 mouse_genomes_project 3 151561836 151563586 - MGP_LPJ_P0064106 4930503B20Rik protein_coding protein_coding MGP_LPJ_T0100651.1 MGP_LPJ_G0038914.1 mouse_genomes_project 3 4819724 4819841 - Gm23592 snoRNA snoRNA MGP_LPJ_T0062050.1 MGP_LPJ_G0027476.1 mouse_genomes_project 3 96254443 96279758 + MGP_LPJ_P0062050 Rorc protein_coding protein_coding MGP_LPJ_T0062051.1 MGP_LPJ_G0027476.1 mouse_genomes_project 3 96259071 96280194 + MGP_LPJ_P0062051 Rorc protein_coding protein_coding MGP_LPJ_T0062052.1 MGP_LPJ_G0027476.1 mouse_genomes_project 3 96259099 96279564 + Rorc protein_coding retained_intron MGP_LPJ_T0062053.1 MGP_LPJ_G0027476.1 mouse_genomes_project 3 96259155 96279566 + MGP_LPJ_P0062053 Rorc protein_coding protein_coding MGP_LPJ_T0017917.1 MGP_LPJ_G0015426.1 mouse_genomes_project 3 96985709 96989537 + 4930481B07Rik processed_transcript lincRNA MGP_LPJ_T0017918.1 MGP_LPJ_G0015426.1 mouse_genomes_project 3 96986333 96992612 + 4930481B07Rik processed_transcript processed_transcript MGP_LPJ_T0098556.1 MGP_LPJ_G0036830.1 mouse_genomes_project 3 104697355 104699750 + sense_intronic sense_intronic MGP_LPJ_T0004272.1 MGP_LPJ_G0003759.1 mouse_genomes_project 3 63858382 63863366 + Gm26850 antisense antisense MGP_LPJ_T0004273.1 MGP_LPJ_G0003759.1 mouse_genomes_project 3 63858384 63860200 + Gm26850 antisense antisense MGP_LPJ_T0010523.1 MGP_LPJ_G0008641.1 mouse_genomes_project 3 27764079 27764187 + Mir21b miRNA miRNA MGP_LPJ_T0014213.1 MGP_LPJ_G0012304.1 mouse_genomes_project 3 115538964 115539751 + processed_pseudogene processed_pseudogene MGP_LPJ_T0064108.1 MGP_LPJ_G0027906.1 mouse_genomes_project 3 151645116 151734318 - MGP_LPJ_P0064108 Prkacb protein_coding protein_coding MGP_LPJ_T0064109.1 MGP_LPJ_G0027906.1 mouse_genomes_project 3 151645407 151686544 - MGP_LPJ_P0064109 Prkacb protein_coding protein_coding MGP_LPJ_T0064110.1 MGP_LPJ_G0027906.1 mouse_genomes_project 3 151645407 151687064 - MGP_LPJ_P0064110 Prkacb protein_coding protein_coding MGP_LPJ_T0064111.1 MGP_LPJ_G0027906.1 mouse_genomes_project 3 151645409 151697697 - MGP_LPJ_P0064111 Prkacb protein_coding protein_coding MGP_LPJ_T0064112.1 MGP_LPJ_G0027906.1 mouse_genomes_project 3 151647870 151661677 - Prkacb protein_coding retained_intron MGP_LPJ_T0064113.1 MGP_LPJ_G0027906.1 mouse_genomes_project 3 151664022 151707038 - MGP_LPJ_P0064113 Prkacb protein_coding protein_coding MGP_LPJ_T0064114.1 MGP_LPJ_G0027906.1 mouse_genomes_project 3 151664022 151680853 - MGP_LPJ_P0064114 Prkacb protein_coding protein_coding MGP_LPJ_T0064115.1 MGP_LPJ_G0027906.1 mouse_genomes_project 3 151730875 151734348 - Prkacb protein_coding retained_intron MGP_LPJ_T0060783.1 MGP_LPJ_G0027170.1 mouse_genomes_project 3 57270247 57391706 + MGP_LPJ_P0060783 Rnf13 protein_coding protein_coding MGP_LPJ_T0060784.1 MGP_LPJ_G0027170.1 mouse_genomes_project 3 57270248 57316536 + MGP_LPJ_P0060784 Rnf13 protein_coding protein_coding MGP_LPJ_T0060785.1 MGP_LPJ_G0027170.1 mouse_genomes_project 3 57270260 57361998 + Rnf13 protein_coding processed_transcript MGP_LPJ_T0060786.1 MGP_LPJ_G0027170.1 mouse_genomes_project 3 57270267 57390363 + Rnf13 protein_coding processed_transcript MGP_LPJ_T0060787.1 MGP_LPJ_G0027170.1 mouse_genomes_project 3 57270267 57391708 + MGP_LPJ_P0060787 Rnf13 protein_coding protein_coding MGP_LPJ_T0060788.1 MGP_LPJ_G0027170.1 mouse_genomes_project 3 57270270 57382775 + MGP_LPJ_P0060788 Rnf13 protein_coding protein_coding MGP_LPJ_T0060789.1 MGP_LPJ_G0027170.1 mouse_genomes_project 3 57270298 57391594 + MGP_LPJ_P0060789 Rnf13 protein_coding nonsense_mediated_decay MGP_LPJ_T0060790.1 MGP_LPJ_G0027170.1 mouse_genomes_project 3 57270305 57389707 + MGP_LPJ_P0060790 Rnf13 protein_coding protein_coding MGP_LPJ_T0060791.1 MGP_LPJ_G0027170.1 mouse_genomes_project 3 57270305 57305764 + MGP_LPJ_P0060791 Rnf13 protein_coding protein_coding MGP_LPJ_T0060792.1 MGP_LPJ_G0027170.1 mouse_genomes_project 3 57270305 57352480 + MGP_LPJ_P0060792 Rnf13 protein_coding protein_coding MGP_LPJ_T0060793.1 MGP_LPJ_G0027170.1 mouse_genomes_project 3 57350773 57354646 + Rnf13 protein_coding retained_intron MGP_LPJ_T0007508.1 MGP_LPJ_G0006154.1 mouse_genomes_project 3 32869708 32877433 - Gm20515 lincRNA lincRNA MGP_LPJ_T0063606.1 MGP_LPJ_G0027801.1 mouse_genomes_project 3 134023704 134040948 + MGP_LPJ_P0063606 Cfi protein_coding protein_coding MGP_LPJ_T0063607.1 MGP_LPJ_G0027801.1 mouse_genomes_project 3 134024531 134070219 + MGP_LPJ_P0063607 Cfi protein_coding protein_coding MGP_LPJ_T0007573.1 MGP_LPJ_G0006201.1 mouse_genomes_project 3 57711310 57733379 - 1700007F19Rik lincRNA lincRNA MGP_LPJ_T0061939.1 MGP_LPJ_G0027405.1 mouse_genomes_project 3 91894141 91903896 + MGP_LPJ_P0061939 S100a13 protein_coding protein_coding MGP_LPJ_T0007758.1 MGP_LPJ_G0006348.1 mouse_genomes_project 3 148338504 148340282 + Gm42704 lincRNA lincRNA MGP_LPJ_T0014063.1 MGP_LPJ_G0012154.1 mouse_genomes_project 3 69628035 69629395 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013895.1 MGP_LPJ_G0011986.1 mouse_genomes_project 3 12109167 12115672 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014241.1 MGP_LPJ_G0012332.1 mouse_genomes_project 3 125559007 125559413 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013859.1 MGP_LPJ_G0011950.1 mouse_genomes_project 3 3576415 3576533 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060237.1 MGP_LPJ_G0027076.1 mouse_genomes_project 3 30887528 30898107 + MGP_LPJ_P0060237 Zfp639 protein_coding protein_coding MGP_LPJ_T0060238.1 MGP_LPJ_G0027076.1 mouse_genomes_project 3 30887804 30898017 + MGP_LPJ_P0060238 Zfp639 protein_coding protein_coding MGP_LPJ_T0060239.1 MGP_LPJ_G0027076.1 mouse_genomes_project 3 30887933 30896840 + MGP_LPJ_P0060239 Zfp639 protein_coding protein_coding MGP_LPJ_T0060240.1 MGP_LPJ_G0027076.1 mouse_genomes_project 3 30888165 30890445 + Zfp639 protein_coding processed_transcript MGP_LPJ_T0060241.1 MGP_LPJ_G0027076.1 mouse_genomes_project 3 30889447 30896903 + Zfp639 protein_coding retained_intron MGP_LPJ_T0060242.1 MGP_LPJ_G0027076.1 mouse_genomes_project 3 30890269 30896842 + MGP_LPJ_P0060242 Zfp639 protein_coding protein_coding MGP_LPJ_T0060243.1 MGP_LPJ_G0027076.1 mouse_genomes_project 3 30892568 30897959 + MGP_LPJ_P0060243 Zfp639 protein_coding protein_coding MGP_LPJ_T0060244.1 MGP_LPJ_G0027076.1 mouse_genomes_project 3 30894353 30897791 + MGP_LPJ_P0060244 Zfp639 protein_coding protein_coding MGP_LPJ_T0060245.1 MGP_LPJ_G0027076.1 mouse_genomes_project 3 30896072 30896834 + Zfp639 protein_coding retained_intron MGP_LPJ_T0004326.1 MGP_LPJ_G0003796.1 mouse_genomes_project 3 98387305 98407836 - antisense antisense MGP_LPJ_T0061999.1 MGP_LPJ_G0027440.1 mouse_genomes_project 3 94291996 94293576 - MGP_LPJ_P0061999 Lce6a protein_coding protein_coding MGP_LPJ_T0062000.1 MGP_LPJ_G0027440.1 mouse_genomes_project 3 94292000 94293096 - MGP_LPJ_P0062000 Lce6a protein_coding protein_coding MGP_LPJ_T0007641.1 MGP_LPJ_G0006250.1 mouse_genomes_project 3 98522744 98539277 - lincRNA lincRNA MGP_LPJ_T0007642.1 MGP_LPJ_G0006250.1 mouse_genomes_project 3 98522745 98534645 - lincRNA lincRNA MGP_LPJ_T0001225.1 MGP_LPJ_G0001147.1 mouse_genomes_project 3 50934136 50935512 + TEC TEC MGP_LPJ_T0001226.1 MGP_LPJ_G0001147.1 mouse_genomes_project 3 50934191 50935512 + TEC TEC MGP_LPJ_T0064001.1 MGP_LPJ_G0027881.1 mouse_genomes_project 3 149643691 149669874 - MGP_LPJ_P0064001 Clca4b protein_coding protein_coding MGP_LPJ_T0014181.1 MGP_LPJ_G0012272.1 mouse_genomes_project 3 105453217 105453506 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062377.1 MGP_LPJ_G0027531.1 mouse_genomes_project 3 98093016 98100219 - MGP_LPJ_P0062377 Plekho1 protein_coding protein_coding MGP_LPJ_T0062378.1 MGP_LPJ_G0027531.1 mouse_genomes_project 3 98093034 98104042 - MGP_LPJ_P0062378 Plekho1 protein_coding protein_coding MGP_LPJ_T0062379.1 MGP_LPJ_G0027531.1 mouse_genomes_project 3 98093587 98100273 - MGP_LPJ_P0062379 Plekho1 protein_coding protein_coding MGP_LPJ_T0062380.1 MGP_LPJ_G0027531.1 mouse_genomes_project 3 98099885 98100219 - Plekho1 protein_coding retained_intron MGP_LPJ_T0062175.1 MGP_LPJ_G0027496.1 mouse_genomes_project 3 97093124 97106900 + MGP_LPJ_P0062175 Vps72 protein_coding protein_coding MGP_LPJ_T0062176.1 MGP_LPJ_G0027496.1 mouse_genomes_project 3 97093144 97102135 + Vps72 protein_coding processed_transcript MGP_LPJ_T0062177.1 MGP_LPJ_G0027496.1 mouse_genomes_project 3 97093175 97106570 + Vps72 protein_coding processed_transcript MGP_LPJ_T0062178.1 MGP_LPJ_G0027496.1 mouse_genomes_project 3 97096747 97103014 + Vps72 protein_coding processed_transcript MGP_LPJ_T0062179.1 MGP_LPJ_G0027496.1 mouse_genomes_project 3 97098625 97103133 + Vps72 protein_coding retained_intron MGP_LPJ_T0100660.1 MGP_LPJ_G0038923.1 mouse_genomes_project 3 32377737 32377869 - Gm23175 snoRNA snoRNA MGP_LPJ_T0007582.1 MGP_LPJ_G0006208.1 mouse_genomes_project 3 68899359 68900879 - 4930535E02Rik lincRNA lincRNA MGP_LPJ_T0004237.1 MGP_LPJ_G0003732.1 mouse_genomes_project 3 31426241 31493859 + 4930419G24Rik antisense antisense MGP_LPJ_T0014152.1 MGP_LPJ_G0012243.1 mouse_genomes_project 3 98067761 98068121 - processed_pseudogene processed_pseudogene MGP_LPJ_T0059944.1 MGP_LPJ_G0027010.1 mouse_genomes_project 3 12235888 12276748 + MGP_LPJ_P0059944 Lrrcc1 protein_coding protein_coding MGP_LPJ_T0059945.1 MGP_LPJ_G0027010.1 mouse_genomes_project 3 12235923 12270557 + MGP_LPJ_P0059945 Lrrcc1 protein_coding protein_coding MGP_LPJ_T0059946.1 MGP_LPJ_G0027010.1 mouse_genomes_project 3 12235924 12268359 + MGP_LPJ_P0059946 Lrrcc1 protein_coding protein_coding MGP_LPJ_T0059947.1 MGP_LPJ_G0027010.1 mouse_genomes_project 3 12235979 12264404 + MGP_LPJ_P0059947 Lrrcc1 protein_coding protein_coding MGP_LPJ_T0059948.1 MGP_LPJ_G0027010.1 mouse_genomes_project 3 12236034 12253711 + MGP_LPJ_P0059948 Lrrcc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0059949.1 MGP_LPJ_G0027010.1 mouse_genomes_project 3 12250357 12268662 + MGP_LPJ_P0059949 Lrrcc1 protein_coding protein_coding MGP_LPJ_T0059950.1 MGP_LPJ_G0027010.1 mouse_genomes_project 3 12250433 12256711 + MGP_LPJ_P0059950 Lrrcc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0059951.1 MGP_LPJ_G0027010.1 mouse_genomes_project 3 12252617 12261563 + MGP_LPJ_P0059951 Lrrcc1 protein_coding protein_coding MGP_LPJ_T0061022.1 MGP_LPJ_G0027227.1 mouse_genomes_project 3 69162633 69192840 + MGP_LPJ_P0061022 Smc4 protein_coding protein_coding MGP_LPJ_T0061023.1 MGP_LPJ_G0027227.1 mouse_genomes_project 3 69162865 69176309 + MGP_LPJ_P0061023 Smc4 protein_coding protein_coding MGP_LPJ_T0061024.1 MGP_LPJ_G0027227.1 mouse_genomes_project 3 69162886 69192835 + MGP_LPJ_P0061024 Smc4 protein_coding protein_coding MGP_LPJ_T0061025.1 MGP_LPJ_G0027227.1 mouse_genomes_project 3 69162903 69192840 + MGP_LPJ_P0061025 Smc4 protein_coding nonsense_mediated_decay MGP_LPJ_T0061026.1 MGP_LPJ_G0027227.1 mouse_genomes_project 3 69162910 69186659 + MGP_LPJ_P0061026 Smc4 protein_coding nonsense_mediated_decay MGP_LPJ_T0061027.1 MGP_LPJ_G0027227.1 mouse_genomes_project 3 69174690 69176374 + Smc4 protein_coding retained_intron MGP_LPJ_T0061028.1 MGP_LPJ_G0027227.1 mouse_genomes_project 3 69174896 69177540 + Smc4 protein_coding processed_transcript MGP_LPJ_T0061029.1 MGP_LPJ_G0027227.1 mouse_genomes_project 3 69177118 69179613 + Smc4 protein_coding retained_intron MGP_LPJ_T0061030.1 MGP_LPJ_G0027227.1 mouse_genomes_project 3 69180260 69182512 + Smc4 protein_coding retained_intron MGP_LPJ_T0061031.1 MGP_LPJ_G0027227.1 mouse_genomes_project 3 69182404 69186103 + MGP_LPJ_P0061031 Smc4 protein_coding nonsense_mediated_decay MGP_LPJ_T0061032.1 MGP_LPJ_G0027227.1 mouse_genomes_project 3 69188589 69191300 + Smc4 protein_coding retained_intron MGP_LPJ_T0063620.1 MGP_LPJ_G0027805.1 mouse_genomes_project 3 134188371 134273169 - MGP_LPJ_P0063620 Sec24b protein_coding protein_coding MGP_LPJ_T0063621.1 MGP_LPJ_G0027805.1 mouse_genomes_project 3 134189055 134190133 - Sec24b protein_coding retained_intron MGP_LPJ_T0063622.1 MGP_LPJ_G0027805.1 mouse_genomes_project 3 134189224 134189895 - Sec24b protein_coding processed_transcript MGP_LPJ_T0063623.1 MGP_LPJ_G0027805.1 mouse_genomes_project 3 134194185 134195929 - Sec24b protein_coding retained_intron MGP_LPJ_T0063624.1 MGP_LPJ_G0027805.1 mouse_genomes_project 3 134195843 134250238 - MGP_LPJ_P0063624 Sec24b protein_coding protein_coding MGP_LPJ_T0063625.1 MGP_LPJ_G0027805.1 mouse_genomes_project 3 134212833 134250208 - Sec24b protein_coding retained_intron MGP_LPJ_T0063626.1 MGP_LPJ_G0027805.1 mouse_genomes_project 3 134212859 134250514 - MGP_LPJ_P0063626 Sec24b protein_coding protein_coding MGP_LPJ_T0063627.1 MGP_LPJ_G0027805.1 mouse_genomes_project 3 134215232 134238380 - Sec24b protein_coding retained_intron MGP_LPJ_T0063628.1 MGP_LPJ_G0027805.1 mouse_genomes_project 3 134250630 134273815 - Sec24b protein_coding processed_transcript MGP_LPJ_T0100650.1 MGP_LPJ_G0038913.1 mouse_genomes_project 3 4303531 4303644 + Gm22074 snoRNA snoRNA MGP_LPJ_T0013942.1 MGP_LPJ_G0012033.1 mouse_genomes_project 3 32094609 32094967 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004368.1 MGP_LPJ_G0003817.1 mouse_genomes_project 3 111208053 111216130 - 1700010K24Rik antisense antisense MGP_LPJ_T0014263.1 MGP_LPJ_G0012354.1 mouse_genomes_project 3 133600395 133601437 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001366.1 MGP_LPJ_G0001286.1 mouse_genomes_project 3 131779724 131782085 - TEC TEC MGP_LPJ_T0061991.1 MGP_LPJ_G0027433.1 mouse_genomes_project 3 94122619 94124849 - MGP_LPJ_P0061991 Sprr3 protein_coding protein_coding MGP_LPJ_T0063151.1 MGP_LPJ_G0027720.1 mouse_genomes_project 3 112388027 112743655 + MGP_LPJ_P0063151 Vav3 protein_coding protein_coding MGP_LPJ_T0063152.1 MGP_LPJ_G0027720.1 mouse_genomes_project 3 112388057 112619944 + Vav3 protein_coding retained_intron MGP_LPJ_T0063153.1 MGP_LPJ_G0027720.1 mouse_genomes_project 3 112388480 112497494 + Vav3 protein_coding processed_transcript MGP_LPJ_T0063154.1 MGP_LPJ_G0027720.1 mouse_genomes_project 3 112549983 112558894 + Vav3 protein_coding processed_transcript MGP_LPJ_T0063155.1 MGP_LPJ_G0027720.1 mouse_genomes_project 3 112630292 112743651 + MGP_LPJ_P0063155 Vav3 protein_coding protein_coding MGP_LPJ_T0063156.1 MGP_LPJ_G0027720.1 mouse_genomes_project 3 112706308 112740856 + Vav3 protein_coding processed_transcript MGP_LPJ_T0060368.1 MGP_LPJ_G0027094.1 mouse_genomes_project 3 34698621 34717998 + MGP_LPJ_P0060368 D3Ertd254e protein_coding protein_coding MGP_LPJ_T0060369.1 MGP_LPJ_G0027094.1 mouse_genomes_project 3 34698766 34710269 + MGP_LPJ_P0060369 D3Ertd254e protein_coding protein_coding MGP_LPJ_T0060370.1 MGP_LPJ_G0027094.1 mouse_genomes_project 3 34707116 34717991 + MGP_LPJ_P0060370 D3Ertd254e protein_coding protein_coding MGP_LPJ_T0099443.1 MGP_LPJ_G0037706.1 mouse_genomes_project 3 136122295 136122390 + Gm26103 snRNA snRNA MGP_LPJ_T0063731.1 MGP_LPJ_G0027828.1 mouse_genomes_project 3 139507475 139583527 + MGP_LPJ_P0063731 Cenpe protein_coding protein_coding MGP_LPJ_T0063732.1 MGP_LPJ_G0027828.1 mouse_genomes_project 3 139538189 139544375 + MGP_LPJ_P0063732 Cenpe protein_coding protein_coding MGP_LPJ_T0063733.1 MGP_LPJ_G0027828.1 mouse_genomes_project 3 139569177 139569617 + Cenpe protein_coding retained_intron MGP_LPJ_T0063734.1 MGP_LPJ_G0027828.1 mouse_genomes_project 3 139569980 139576092 + Cenpe protein_coding retained_intron MGP_LPJ_T0063735.1 MGP_LPJ_G0027828.1 mouse_genomes_project 3 139580530 139581062 + Cenpe protein_coding retained_intron MGP_LPJ_T0062255.1 MGP_LPJ_G0027511.1 mouse_genomes_project 3 97344377 97352724 + MGP_LPJ_P0062255 Cers2 protein_coding protein_coding MGP_LPJ_T0062256.1 MGP_LPJ_G0027511.1 mouse_genomes_project 3 97344670 97354443 + MGP_LPJ_P0062256 Cers2 protein_coding protein_coding MGP_LPJ_T0062257.1 MGP_LPJ_G0027511.1 mouse_genomes_project 3 97344833 97351617 + Cers2 protein_coding retained_intron MGP_LPJ_T0062258.1 MGP_LPJ_G0027511.1 mouse_genomes_project 3 97344853 97352167 + Cers2 protein_coding retained_intron MGP_LPJ_T0062259.1 MGP_LPJ_G0027511.1 mouse_genomes_project 3 97348170 97351394 + Cers2 protein_coding retained_intron MGP_LPJ_T0062260.1 MGP_LPJ_G0027511.1 mouse_genomes_project 3 97348841 97351886 + MGP_LPJ_P0062260 Cers2 protein_coding protein_coding MGP_LPJ_T0062261.1 MGP_LPJ_G0027511.1 mouse_genomes_project 3 97349634 97352799 + MGP_LPJ_P0062261 Cers2 protein_coding protein_coding MGP_LPJ_T0062262.1 MGP_LPJ_G0027511.1 mouse_genomes_project 3 97350976 97353516 + Cers2 protein_coding retained_intron MGP_LPJ_T0062263.1 MGP_LPJ_G0027511.1 mouse_genomes_project 3 97351783 97352801 + Cers2 protein_coding retained_intron MGP_LPJ_T0061571.1 MGP_LPJ_G0027346.1 mouse_genomes_project 3 90162743 90183231 - MGP_LPJ_P0061571 Msto1 protein_coding protein_coding MGP_LPJ_T0061572.1 MGP_LPJ_G0027346.1 mouse_genomes_project 3 90166261 90181374 - Msto1 protein_coding retained_intron MGP_LPJ_T0061583.1 MGP_LPJ_G0027346.1 mouse_genomes_project 3 90178914 90183299 - MGP_LPJ_P0061583 Msto1 protein_coding protein_coding MGP_LPJ_T0061584.1 MGP_LPJ_G0027346.1 mouse_genomes_project 3 90178943 90183203 - Msto1 protein_coding retained_intron MGP_LPJ_T0061585.1 MGP_LPJ_G0027346.1 mouse_genomes_project 3 90180658 90183182 - Msto1 protein_coding retained_intron MGP_LPJ_T0014000.1 MGP_LPJ_G0012091.1 mouse_genomes_project 3 50808120 50808433 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001355.1 MGP_LPJ_G0001275.1 mouse_genomes_project 3 130731374 130733290 + TEC TEC MGP_LPJ_T0007713.1 MGP_LPJ_G0006308.1 mouse_genomes_project 3 133202909 133205649 - Gm28543 lincRNA lincRNA MGP_LPJ_T0011564.1 MGP_LPJ_G0009682.1 mouse_genomes_project 3 125040463 125040731 + Gm26027 misc_RNA misc_RNA MGP_LPJ_T0007706.1 MGP_LPJ_G0006301.1 mouse_genomes_project 3 128742288 128845953 + Gm42825 lincRNA lincRNA MGP_LPJ_T0061417.1 MGP_LPJ_G0027321.1 mouse_genomes_project 3 89358643 89415636 - MGP_LPJ_P0061417 Gm38392 protein_coding protein_coding MGP_LPJ_T0061418.1 MGP_LPJ_G0027321.1 mouse_genomes_project 3 89360458 89415636 - MGP_LPJ_P0061418 Gm38392 protein_coding nonsense_mediated_decay MGP_LPJ_T0017922.1 MGP_LPJ_G0015429.1 mouse_genomes_project 3 102895225 102897686 + 4930406D18Rik processed_transcript retained_intron MGP_LPJ_T0017923.1 MGP_LPJ_G0015429.1 mouse_genomes_project 3 102895259 102906606 + 4930406D18Rik processed_transcript lincRNA MGP_LPJ_T0061301.1 MGP_LPJ_G0027296.1 mouse_genomes_project 3 88402980 88415952 + MGP_LPJ_P0061301 Cd5l protein_coding protein_coding MGP_LPJ_T0001240.1 MGP_LPJ_G0001160.1 mouse_genomes_project 3 52392690 52395763 - TEC TEC MGP_LPJ_T0062704.1 MGP_LPJ_G0027616.1 mouse_genomes_project 3 105647120 105674528 + MGP_LPJ_P0062704 Ampd1 protein_coding protein_coding MGP_LPJ_T0062705.1 MGP_LPJ_G0027616.1 mouse_genomes_project 3 105647128 105674522 + MGP_LPJ_P0062705 Ampd1 protein_coding protein_coding MGP_LPJ_T0062706.1 MGP_LPJ_G0027616.1 mouse_genomes_project 3 105647159 105662773 + MGP_LPJ_P0062706 Ampd1 protein_coding protein_coding MGP_LPJ_T0062707.1 MGP_LPJ_G0027616.1 mouse_genomes_project 3 105668204 105669232 + Ampd1 protein_coding retained_intron MGP_LPJ_T0062708.1 MGP_LPJ_G0027616.1 mouse_genomes_project 3 105668875 105674514 + MGP_LPJ_P0062708 Ampd1 protein_coding protein_coding MGP_LPJ_T0004404.1 MGP_LPJ_G0003846.1 mouse_genomes_project 3 140250699 140280481 + antisense antisense MGP_LPJ_T0004405.1 MGP_LPJ_G0003846.1 mouse_genomes_project 3 140279710 140526289 + antisense antisense MGP_LPJ_T0061490.1 MGP_LPJ_G0027334.1 mouse_genomes_project 3 89655350 89659811 - Lmna protein_coding retained_intron MGP_LPJ_T0061491.1 MGP_LPJ_G0027334.1 mouse_genomes_project 3 89656351 89679308 - MGP_LPJ_P0061491 Lmna protein_coding protein_coding MGP_LPJ_T0061492.1 MGP_LPJ_G0027334.1 mouse_genomes_project 3 89657049 89679310 - Lmna protein_coding processed_transcript MGP_LPJ_T0061493.1 MGP_LPJ_G0027334.1 mouse_genomes_project 3 89657280 89658068 - Lmna protein_coding retained_intron MGP_LPJ_T0061494.1 MGP_LPJ_G0027334.1 mouse_genomes_project 3 89658408 89679280 - MGP_LPJ_P0061494 Lmna protein_coding protein_coding MGP_LPJ_T0061495.1 MGP_LPJ_G0027334.1 mouse_genomes_project 3 89658409 89669342 - MGP_LPJ_P0061495 Lmna protein_coding protein_coding MGP_LPJ_T0061496.1 MGP_LPJ_G0027334.1 mouse_genomes_project 3 89678725 89687336 - MGP_LPJ_P0061496 Lmna protein_coding protein_coding MGP_LPJ_T0060101.1 MGP_LPJ_G0027048.1 mouse_genomes_project 3 25370007 25376666 + MGP_LPJ_P0060101 Ghsr protein_coding protein_coding MGP_LPJ_T0007788.1 MGP_LPJ_G0006370.1 mouse_genomes_project 3 156444806 156447322 + 4930555A03Rik lincRNA lincRNA MGP_LPJ_T0007789.1 MGP_LPJ_G0006370.1 mouse_genomes_project 3 156444842 156446986 + 4930555A03Rik lincRNA lincRNA MGP_LPJ_T0007790.1 MGP_LPJ_G0006370.1 mouse_genomes_project 3 156444843 156446272 + 4930555A03Rik lincRNA lincRNA MGP_LPJ_T0007791.1 MGP_LPJ_G0006370.1 mouse_genomes_project 3 156445683 156446984 + 4930555A03Rik lincRNA lincRNA MGP_LPJ_T0064278.1 MGP_LPJ_G0027927.1 mouse_genomes_project 3 159223920 159245804 - MGP_LPJ_P0064278 Acadm protein_coding protein_coding MGP_LPJ_T0064279.1 MGP_LPJ_G0027927.1 mouse_genomes_project 3 159227051 159231517 - Acadm protein_coding retained_intron MGP_LPJ_T0064280.1 MGP_LPJ_G0027927.1 mouse_genomes_project 3 159227192 159238995 - Acadm protein_coding retained_intron MGP_LPJ_T0064281.1 MGP_LPJ_G0027927.1 mouse_genomes_project 3 159231498 159237969 - Acadm protein_coding retained_intron MGP_LPJ_T0064282.1 MGP_LPJ_G0027927.1 mouse_genomes_project 3 159237483 159239860 - Acadm protein_coding retained_intron MGP_LPJ_T0064283.1 MGP_LPJ_G0027927.1 mouse_genomes_project 3 159237489 159245639 - MGP_LPJ_P0064283 Acadm protein_coding nonsense_mediated_decay MGP_LPJ_T0064284.1 MGP_LPJ_G0027927.1 mouse_genomes_project 3 159237543 159245618 - MGP_LPJ_P0064284 Acadm protein_coding protein_coding MGP_LPJ_T0064285.1 MGP_LPJ_G0027927.1 mouse_genomes_project 3 159239480 159245614 - Acadm protein_coding retained_intron MGP_LPJ_T0064286.1 MGP_LPJ_G0027927.1 mouse_genomes_project 3 159239842 159243072 - Acadm protein_coding retained_intron MGP_LPJ_T0064287.1 MGP_LPJ_G0027927.1 mouse_genomes_project 3 159242770 159245635 - Acadm protein_coding retained_intron MGP_LPJ_T0061041.1 MGP_LPJ_G0027231.1 mouse_genomes_project 3 69495644 69762045 + MGP_LPJ_P0061041 Ppm1l protein_coding protein_coding MGP_LPJ_T0061042.1 MGP_LPJ_G0027231.1 mouse_genomes_project 3 69697151 69697913 + Ppm1l protein_coding retained_intron MGP_LPJ_T0061043.1 MGP_LPJ_G0027231.1 mouse_genomes_project 3 69743680 69754157 + Ppm1l protein_coding processed_transcript MGP_LPJ_T0061044.1 MGP_LPJ_G0027231.1 mouse_genomes_project 3 69750238 69754338 + Ppm1l protein_coding retained_intron MGP_LPJ_T0001354.1 MGP_LPJ_G0001274.1 mouse_genomes_project 3 130722792 130726321 + TEC TEC MGP_LPJ_T0062893.1 MGP_LPJ_G0027657.1 mouse_genomes_project 3 109015230 109040803 - protein_coding retained_intron MGP_LPJ_T0062037.1 MGP_LPJ_G0027469.1 mouse_genomes_project 3 95182617 95191158 + MGP_LPJ_P0062037 Tchh protein_coding protein_coding MGP_LPJ_T0001174.1 MGP_LPJ_G0001096.1 mouse_genomes_project 3 32374872 32375820 + TEC TEC MGP_LPJ_T0014195.1 MGP_LPJ_G0012286.1 mouse_genomes_project 3 110711443 110712059 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001176.1 MGP_LPJ_G0001098.1 mouse_genomes_project 3 32497150 32502485 + TEC TEC MGP_LPJ_T0007653.1 MGP_LPJ_G0006261.1 mouse_genomes_project 3 102959535 102994483 + Gm12474 lincRNA lincRNA MGP_LPJ_T0014175.1 MGP_LPJ_G0012266.1 mouse_genomes_project 3 104633919 104634197 + processed_pseudogene processed_pseudogene MGP_LPJ_T0061548.1 MGP_LPJ_G0027342.1 mouse_genomes_project 3 89877575 89904489 + MGP_LPJ_P0061548 2810403A07Rik protein_coding protein_coding MGP_LPJ_T0061549.1 MGP_LPJ_G0027342.1 mouse_genomes_project 3 89877586 89879835 + 2810403A07Rik protein_coding retained_intron MGP_LPJ_T0061550.1 MGP_LPJ_G0027342.1 mouse_genomes_project 3 89877599 89904419 + MGP_LPJ_P0061550 2810403A07Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0061551.1 MGP_LPJ_G0027342.1 mouse_genomes_project 3 89877599 89904127 + MGP_LPJ_P0061551 2810403A07Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0061552.1 MGP_LPJ_G0027342.1 mouse_genomes_project 3 89877605 89893186 + 2810403A07Rik protein_coding retained_intron MGP_LPJ_T0061553.1 MGP_LPJ_G0027342.1 mouse_genomes_project 3 89877609 89903568 + MGP_LPJ_P0061553 2810403A07Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0061554.1 MGP_LPJ_G0027342.1 mouse_genomes_project 3 89884956 89900473 + 2810403A07Rik protein_coding processed_transcript MGP_LPJ_T0061555.1 MGP_LPJ_G0027342.1 mouse_genomes_project 3 89890411 89892489 + 2810403A07Rik protein_coding retained_intron MGP_LPJ_T0061556.1 MGP_LPJ_G0027342.1 mouse_genomes_project 3 89891212 89900552 + 2810403A07Rik protein_coding retained_intron MGP_LPJ_T0061557.1 MGP_LPJ_G0027342.1 mouse_genomes_project 3 89900344 89902649 + 2810403A07Rik protein_coding processed_transcript MGP_LPJ_T0011559.1 MGP_LPJ_G0009677.1 mouse_genomes_project 3 90588722 90588974 + Gm22642 misc_RNA misc_RNA MGP_LPJ_T0061860.1 MGP_LPJ_G0027390.1 mouse_genomes_project 3 91454348 91572608 + MGP_LPJ_P0061860 protein_coding protein_coding MGP_LPJ_T0061861.1 MGP_LPJ_G0027390.1 mouse_genomes_project 3 91454350 91572639 + MGP_LPJ_P0061861 protein_coding protein_coding MGP_LPJ_T0063092.1 MGP_LPJ_G0027708.1 mouse_genomes_project 3 111571353 111627671 + MGP_LPJ_P0063092 Wdr47 protein_coding protein_coding MGP_LPJ_T0063093.1 MGP_LPJ_G0027708.1 mouse_genomes_project 3 111571426 111599788 + MGP_LPJ_P0063093 Wdr47 protein_coding nonsense_mediated_decay MGP_LPJ_T0063094.1 MGP_LPJ_G0027708.1 mouse_genomes_project 3 111571463 111595674 + Wdr47 protein_coding retained_intron MGP_LPJ_T0063095.1 MGP_LPJ_G0027708.1 mouse_genomes_project 3 111599984 111605787 + Wdr47 protein_coding processed_transcript MGP_LPJ_T0063096.1 MGP_LPJ_G0027708.1 mouse_genomes_project 3 111600365 111608677 + Wdr47 protein_coding retained_intron MGP_LPJ_T0063097.1 MGP_LPJ_G0027708.1 mouse_genomes_project 3 111604480 111614271 + Wdr47 protein_coding processed_transcript MGP_LPJ_T0063098.1 MGP_LPJ_G0027708.1 mouse_genomes_project 3 111608325 111619874 + Wdr47 protein_coding retained_intron MGP_LPJ_T0100698.1 MGP_LPJ_G0038961.1 mouse_genomes_project 3 102764070 102764147 + Gm25802 snoRNA snoRNA MGP_LPJ_T0014325.1 MGP_LPJ_G0012416.1 mouse_genomes_project 3 151611443 151612059 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101535.1 MGP_LPJ_G0039649.1 mouse_genomes_project 3 29939797 30022210 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0101536.1 MGP_LPJ_G0039649.1 mouse_genomes_project 3 29972210 29978930 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0100700.1 MGP_LPJ_G0038963.1 mouse_genomes_project 3 106849812 106849928 + Gm23077 snoRNA snoRNA MGP_LPJ_T0063213.1 MGP_LPJ_G0027733.1 mouse_genomes_project 3 119420505 119421517 + Extl2 protein_coding processed_transcript MGP_LPJ_T0063214.1 MGP_LPJ_G0027733.1 mouse_genomes_project 3 119420543 119437673 + Extl2 protein_coding processed_transcript MGP_LPJ_T0063215.1 MGP_LPJ_G0027733.1 mouse_genomes_project 3 119420848 119423886 + Extl2 protein_coding processed_transcript MGP_LPJ_T0063216.1 MGP_LPJ_G0027733.1 mouse_genomes_project 3 119423709 119442167 + MGP_LPJ_P0063216 Extl2 protein_coding protein_coding MGP_LPJ_T0013872.1 MGP_LPJ_G0011963.1 mouse_genomes_project 3 6434298 6438160 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001144.1 MGP_LPJ_G0001066.1 mouse_genomes_project 3 7800584 7800914 + TEC TEC MGP_LPJ_T0007556.1 MGP_LPJ_G0006188.1 mouse_genomes_project 3 51442928 51450578 - Gm30074 lincRNA lincRNA MGP_LPJ_T0061155.1 MGP_LPJ_G0027258.1 mouse_genomes_project 3 82725240 82750251 + MGP_LPJ_P0061155 Ctso protein_coding protein_coding MGP_LPJ_T0061156.1 MGP_LPJ_G0027258.1 mouse_genomes_project 3 82725262 82725964 + Ctso protein_coding retained_intron MGP_LPJ_T0061157.1 MGP_LPJ_G0027258.1 mouse_genomes_project 3 82725281 82736552 + Ctso protein_coding processed_transcript MGP_LPJ_T0061158.1 MGP_LPJ_G0027258.1 mouse_genomes_project 3 82744272 82747828 + Ctso protein_coding retained_intron MGP_LPJ_T0060945.1 MGP_LPJ_G0027210.1 mouse_genomes_project 3 65999548 66011597 - Ccnl1 protein_coding retained_intron MGP_LPJ_T0060946.1 MGP_LPJ_G0027210.1 mouse_genomes_project 3 65999548 66011647 - MGP_LPJ_P0060946 Ccnl1 protein_coding protein_coding MGP_LPJ_T0060947.1 MGP_LPJ_G0027210.1 mouse_genomes_project 3 65999592 66011430 - MGP_LPJ_P0060947 Ccnl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0060948.1 MGP_LPJ_G0027210.1 mouse_genomes_project 3 65999906 66011561 - Ccnl1 protein_coding retained_intron MGP_LPJ_T0060949.1 MGP_LPJ_G0027210.1 mouse_genomes_project 3 66000179 66001396 - Ccnl1 protein_coding retained_intron MGP_LPJ_T0060950.1 MGP_LPJ_G0027210.1 mouse_genomes_project 3 66001351 66010254 - MGP_LPJ_P0060950 Ccnl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0060951.1 MGP_LPJ_G0027210.1 mouse_genomes_project 3 66001905 66004376 - Ccnl1 protein_coding retained_intron MGP_LPJ_T0060952.1 MGP_LPJ_G0027210.1 mouse_genomes_project 3 66002289 66011579 - Ccnl1 protein_coding retained_intron MGP_LPJ_T0060953.1 MGP_LPJ_G0027210.1 mouse_genomes_project 3 66003298 66010287 - MGP_LPJ_P0060953 Ccnl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0060954.1 MGP_LPJ_G0027210.1 mouse_genomes_project 3 66003804 66005266 - Ccnl1 protein_coding retained_intron MGP_LPJ_T0060955.1 MGP_LPJ_G0027210.1 mouse_genomes_project 3 66004646 66006391 - Ccnl1 protein_coding retained_intron MGP_LPJ_T0060956.1 MGP_LPJ_G0027210.1 mouse_genomes_project 3 66004831 66011051 - Ccnl1 protein_coding retained_intron MGP_LPJ_T0060957.1 MGP_LPJ_G0027210.1 mouse_genomes_project 3 66008643 66011526 - MGP_LPJ_P0060957 Ccnl1 protein_coding unknown_likely_coding MGP_LPJ_T0062401.1 MGP_LPJ_G0027536.1 mouse_genomes_project 3 98301907 98318406 + MGP_LPJ_P0062401 Sv2a protein_coding protein_coding MGP_LPJ_T0062402.1 MGP_LPJ_G0027536.1 mouse_genomes_project 3 98307474 98309236 + Sv2a protein_coding retained_intron MGP_LPJ_T0062403.1 MGP_LPJ_G0027536.1 mouse_genomes_project 3 98315430 98318403 + Sv2a protein_coding processed_transcript MGP_LPJ_T0060191.1 MGP_LPJ_G0027064.1 mouse_genomes_project 3 28994615 29024160 + MGP_LPJ_P0060191 Sec62 protein_coding protein_coding MGP_LPJ_T0060192.1 MGP_LPJ_G0027064.1 mouse_genomes_project 3 28995076 29003263 + Sec62 protein_coding retained_intron MGP_LPJ_T0060193.1 MGP_LPJ_G0027064.1 mouse_genomes_project 3 29021747 29022929 + Sec62 protein_coding processed_transcript MGP_LPJ_T0061594.1 MGP_LPJ_G0027350.1 mouse_genomes_project 3 90351681 90357746 - MGP_LPJ_P0061594 Rusc1 protein_coding protein_coding MGP_LPJ_T0061595.1 MGP_LPJ_G0027350.1 mouse_genomes_project 3 90351681 90360991 - MGP_LPJ_P0061595 Rusc1 protein_coding protein_coding MGP_LPJ_T0061596.1 MGP_LPJ_G0027350.1 mouse_genomes_project 3 90351681 90361012 - MGP_LPJ_P0061596 Rusc1 protein_coding protein_coding MGP_LPJ_T0061597.1 MGP_LPJ_G0027350.1 mouse_genomes_project 3 90354821 90357442 - Rusc1 protein_coding retained_intron MGP_LPJ_T0061598.1 MGP_LPJ_G0027350.1 mouse_genomes_project 3 90355921 90357676 - MGP_LPJ_P0061598 Rusc1 protein_coding protein_coding MGP_LPJ_T0061599.1 MGP_LPJ_G0027350.1 mouse_genomes_project 3 90356755 90357456 - Rusc1 protein_coding retained_intron MGP_LPJ_T0061600.1 MGP_LPJ_G0027350.1 mouse_genomes_project 3 90356939 90357676 - MGP_LPJ_P0061600 Rusc1 protein_coding protein_coding MGP_LPJ_T0007463.1 MGP_LPJ_G0006122.1 mouse_genomes_project 3 6822316 6855942 + C030034L19Rik lincRNA lincRNA MGP_LPJ_T0007464.1 MGP_LPJ_G0006122.1 mouse_genomes_project 3 6822320 6856858 + C030034L19Rik lincRNA lincRNA MGP_LPJ_T0007465.1 MGP_LPJ_G0006122.1 mouse_genomes_project 3 6822332 6833145 + C030034L19Rik lincRNA lincRNA MGP_LPJ_T0014071.1 MGP_LPJ_G0012162.1 mouse_genomes_project 3 70343298 70343578 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011556.1 MGP_LPJ_G0009674.1 mouse_genomes_project 3 79470328 79470671 + Gm24749 misc_RNA misc_RNA MGP_LPJ_T0014034.1 MGP_LPJ_G0012125.1 mouse_genomes_project 3 61093962 61094254 - processed_pseudogene processed_pseudogene MGP_LPJ_T0062639.1 MGP_LPJ_G0027606.1 mouse_genomes_project 3 104654005 104714993 + MGP_LPJ_P0062639 Casq2 protein_coding protein_coding MGP_LPJ_T0062640.1 MGP_LPJ_G0027606.1 mouse_genomes_project 3 104654136 104714993 + MGP_LPJ_P0062640 Casq2 protein_coding protein_coding MGP_LPJ_T0062641.1 MGP_LPJ_G0027606.1 mouse_genomes_project 3 104654229 104713811 + MGP_LPJ_P0062641 Casq2 protein_coding protein_coding MGP_LPJ_T0062642.1 MGP_LPJ_G0027606.1 mouse_genomes_project 3 104691657 104713828 + Casq2 protein_coding processed_transcript MGP_LPJ_T0062643.1 MGP_LPJ_G0027606.1 mouse_genomes_project 3 104712530 104714065 + Casq2 protein_coding retained_intron MGP_LPJ_T0061737.1 MGP_LPJ_G0027372.1 mouse_genomes_project 3 90693485 90695291 - MGP_LPJ_P0061737 Lenep protein_coding protein_coding MGP_LPJ_T0014122.1 MGP_LPJ_G0012213.1 mouse_genomes_project 3 91131623 91132149 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014027.1 MGP_LPJ_G0012118.1 mouse_genomes_project 3 59397426 59397568 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007777.1 MGP_LPJ_G0006364.1 mouse_genomes_project 3 154225113 154229193 - Gm10287 lincRNA lincRNA MGP_LPJ_T0007778.1 MGP_LPJ_G0006364.1 mouse_genomes_project 3 154225119 154229193 - Gm10287 lincRNA lincRNA MGP_LPJ_T0014342.1 MGP_LPJ_G0012433.1 mouse_genomes_project 3 164998381 164998603 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001404.1 MGP_LPJ_G0001323.1 mouse_genomes_project 3 156221729 156226158 - TEC TEC MGP_LPJ_T0014315.1 MGP_LPJ_G0012406.1 mouse_genomes_project 3 147167086 147167722 + processed_pseudogene processed_pseudogene MGP_LPJ_T0060479.1 MGP_LPJ_G0027117.1 mouse_genomes_project 3 39446706 39459992 + MGP_LPJ_P0060479 Hspa4l protein_coding protein_coding MGP_LPJ_T0060480.1 MGP_LPJ_G0027117.1 mouse_genomes_project 3 39448289 39484129 + MGP_LPJ_P0060480 Hspa4l protein_coding protein_coding MGP_LPJ_T0060481.1 MGP_LPJ_G0027117.1 mouse_genomes_project 3 39448337 39503085 + MGP_LPJ_P0060481 Hspa4l protein_coding protein_coding MGP_LPJ_T0060482.1 MGP_LPJ_G0027117.1 mouse_genomes_project 3 39448391 39463617 + MGP_LPJ_P0060482 Hspa4l protein_coding protein_coding MGP_LPJ_T0060483.1 MGP_LPJ_G0027117.1 mouse_genomes_project 3 39448490 39461519 + Hspa4l protein_coding retained_intron MGP_LPJ_T0060484.1 MGP_LPJ_G0027117.1 mouse_genomes_project 3 39448775 39493296 + MGP_LPJ_P0060484 Hspa4l protein_coding protein_coding MGP_LPJ_T0060485.1 MGP_LPJ_G0027117.1 mouse_genomes_project 3 39475174 39484371 + Hspa4l protein_coding retained_intron MGP_LPJ_T0060486.1 MGP_LPJ_G0027117.1 mouse_genomes_project 3 39486578 39489389 + Hspa4l protein_coding retained_intron MGP_LPJ_T0013909.1 MGP_LPJ_G0012000.1 mouse_genomes_project 3 16375380 16376582 + processed_pseudogene processed_pseudogene MGP_LPJ_T0064237.1 MGP_LPJ_G0027920.1 mouse_genomes_project 3 157696684 157905771 - MGP_LPJ_P0064237 Ak5 protein_coding protein_coding MGP_LPJ_T0064238.1 MGP_LPJ_G0027920.1 mouse_genomes_project 3 157697732 157765583 - MGP_LPJ_P0064238 Ak5 protein_coding protein_coding MGP_LPJ_T0064239.1 MGP_LPJ_G0027920.1 mouse_genomes_project 3 157708600 157714380 - Ak5 protein_coding retained_intron MGP_LPJ_T0001318.1 MGP_LPJ_G0001238.1 mouse_genomes_project 3 111532486 111534847 + TEC TEC MGP_LPJ_T0060637.1 MGP_LPJ_G0027139.1 mouse_genomes_project 3 50925702 51044156 - MGP_LPJ_P0060637 Maml3 protein_coding protein_coding MGP_LPJ_T0060638.1 MGP_LPJ_G0027139.1 mouse_genomes_project 3 50925702 51367953 - MGP_LPJ_P0060638 Maml3 protein_coding protein_coding MGP_LPJ_T0060639.1 MGP_LPJ_G0027139.1 mouse_genomes_project 3 51042000 51044194 - Maml3 protein_coding retained_intron MGP_LPJ_T0060138.1 MGP_LPJ_G0027055.1 mouse_genomes_project 3 26893804 26896885 + MGP_LPJ_P0060138 Rpl22l1 protein_coding protein_coding MGP_LPJ_T0060139.1 MGP_LPJ_G0027055.1 mouse_genomes_project 3 26893837 26896894 + MGP_LPJ_P0060139 Rpl22l1 protein_coding protein_coding MGP_LPJ_T0060140.1 MGP_LPJ_G0027055.1 mouse_genomes_project 3 26893876 26896885 + Rpl22l1 protein_coding retained_intron MGP_LPJ_T0060141.1 MGP_LPJ_G0027055.1 mouse_genomes_project 3 26893878 26896892 + MGP_LPJ_P0060141 Rpl22l1 protein_coding nonsense_mediated_decay MGP_LPJ_T0060142.1 MGP_LPJ_G0027055.1 mouse_genomes_project 3 26893933 26896170 + Rpl22l1 protein_coding processed_transcript MGP_LPJ_T0060143.1 MGP_LPJ_G0027055.1 mouse_genomes_project 3 26893965 26896764 + Rpl22l1 protein_coding processed_transcript MGP_LPJ_T0060144.1 MGP_LPJ_G0027055.1 mouse_genomes_project 3 26894031 26896885 + Rpl22l1 protein_coding processed_transcript MGP_LPJ_T0060145.1 MGP_LPJ_G0027055.1 mouse_genomes_project 3 26895927 26896885 + Rpl22l1 protein_coding retained_intron MGP_LPJ_T0060146.1 MGP_LPJ_G0027055.1 mouse_genomes_project 3 26895968 26896886 + Rpl22l1 protein_coding retained_intron MGP_LPJ_T0061706.1 MGP_LPJ_G0027366.1 mouse_genomes_project 3 90600705 90609755 - MGP_LPJ_P0061706 Efna3 protein_coding protein_coding MGP_LPJ_T0061707.1 MGP_LPJ_G0027366.1 mouse_genomes_project 3 90602170 90609677 - MGP_LPJ_P0061707 Efna3 protein_coding protein_coding MGP_LPJ_T0061708.1 MGP_LPJ_G0027366.1 mouse_genomes_project 3 90602665 90608421 - Efna3 protein_coding processed_transcript MGP_LPJ_T0061917.1 MGP_LPJ_G0027401.1 mouse_genomes_project 3 91854587 91867454 + Ilf2 protein_coding retained_intron MGP_LPJ_T0061918.1 MGP_LPJ_G0027401.1 mouse_genomes_project 3 91854601 91857768 + Ilf2 protein_coding retained_intron MGP_LPJ_T0061919.1 MGP_LPJ_G0027401.1 mouse_genomes_project 3 91854608 91860825 + Ilf2 protein_coding retained_intron MGP_LPJ_T0061920.1 MGP_LPJ_G0027401.1 mouse_genomes_project 3 91854608 91867870 + MGP_LPJ_P0061920 Ilf2 protein_coding protein_coding MGP_LPJ_T0061921.1 MGP_LPJ_G0027401.1 mouse_genomes_project 3 91854618 91864952 + Ilf2 protein_coding retained_intron MGP_LPJ_T0061922.1 MGP_LPJ_G0027401.1 mouse_genomes_project 3 91859140 91865879 + Ilf2 protein_coding retained_intron MGP_LPJ_T0001389.1 MGP_LPJ_G0001308.1 mouse_genomes_project 3 139742356 139745054 - TEC TEC MGP_LPJ_T0001349.1 MGP_LPJ_G0001269.1 mouse_genomes_project 3 130569734 130574239 + TEC TEC MGP_LPJ_T0001409.1 MGP_LPJ_G0001328.1 mouse_genomes_project 3 157609164 157611478 - TEC TEC MGP_LPJ_T0014052.1 MGP_LPJ_G0012143.1 mouse_genomes_project 3 66255903 66256056 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001237.1 MGP_LPJ_G0001157.1 mouse_genomes_project 3 51319685 51326640 - TEC TEC MGP_LPJ_T0014191.1 MGP_LPJ_G0012282.1 mouse_genomes_project 3 108826667 108827096 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102129.1 MGP_LPJ_G0040166.1 mouse_genomes_project 3 162252670 162253145 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0014172.1 MGP_LPJ_G0012263.1 mouse_genomes_project 3 103752432 103752868 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007675.1 MGP_LPJ_G0006278.1 mouse_genomes_project 3 110749664 110762891 - Gm36211 lincRNA lincRNA MGP_LPJ_T0014127.1 MGP_LPJ_G0012218.1 mouse_genomes_project 3 92492391 92492694 + processed_pseudogene processed_pseudogene MGP_LPJ_T0063328.1 MGP_LPJ_G0027755.1 mouse_genomes_project 3 124886781 124978607 - MGP_LPJ_P0063328 Tmem56 protein_coding protein_coding MGP_LPJ_T0063329.1 MGP_LPJ_G0027755.1 mouse_genomes_project 3 124887028 124925407 - MGP_LPJ_P0063329 Tmem56 protein_coding unknown_likely_coding MGP_LPJ_T0063330.1 MGP_LPJ_G0027755.1 mouse_genomes_project 3 124887028 124957900 - MGP_LPJ_P0063330 Tmem56 protein_coding protein_coding MGP_LPJ_T0063331.1 MGP_LPJ_G0027755.1 mouse_genomes_project 3 124887028 124957874 - MGP_LPJ_P0063331 Tmem56 protein_coding protein_coding MGP_LPJ_T0063332.1 MGP_LPJ_G0027755.1 mouse_genomes_project 3 124891057 124947483 - MGP_LPJ_P0063332 Tmem56 protein_coding protein_coding MGP_LPJ_T0063333.1 MGP_LPJ_G0027755.1 mouse_genomes_project 3 124915304 124978607 - MGP_LPJ_P0063333 Tmem56 protein_coding protein_coding MGP_LPJ_T0063334.1 MGP_LPJ_G0027755.1 mouse_genomes_project 3 124915348 124918492 - Tmem56 protein_coding retained_intron MGP_LPJ_T0063335.1 MGP_LPJ_G0027755.1 mouse_genomes_project 3 124924048 124978504 - Tmem56 protein_coding processed_transcript MGP_LPJ_T0063336.1 MGP_LPJ_G0027755.1 mouse_genomes_project 3 124924101 124978511 - Tmem56 protein_coding processed_transcript MGP_LPJ_T0001177.1 MGP_LPJ_G0001099.1 mouse_genomes_project 3 33104596 33107429 + TEC TEC MGP_LPJ_T0060813.1 MGP_LPJ_G0027176.1 mouse_genomes_project 3 58216629 58247995 - MGP_LPJ_P0060813 Erich6 protein_coding protein_coding MGP_LPJ_T0060814.1 MGP_LPJ_G0027176.1 mouse_genomes_project 3 58216639 58241567 - MGP_LPJ_P0060814 Erich6 protein_coding unknown_likely_coding MGP_LPJ_T0014130.1 MGP_LPJ_G0012221.1 mouse_genomes_project 3 93988394 93988695 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099422.1 MGP_LPJ_G0037685.1 mouse_genomes_project 3 94664234 94664336 - Gm24481 snRNA snRNA MGP_LPJ_T0063146.1 MGP_LPJ_G0027717.1 mouse_genomes_project 3 111988456 112050429 - MGP_LPJ_P0063146 Fam102b protein_coding protein_coding MGP_LPJ_T0099409.1 MGP_LPJ_G0037672.1 mouse_genomes_project 3 86925022 86925086 - Gm27811 snRNA snRNA MGP_LPJ_T0007645.1 MGP_LPJ_G0006253.1 mouse_genomes_project 3 98555976 98556841 - 4930477E14Rik lincRNA lincRNA MGP_LPJ_T0062463.1 MGP_LPJ_G0027558.1 mouse_genomes_project 3 98884636 98902648 - MGP_LPJ_P0062463 Polr3c protein_coding protein_coding MGP_LPJ_T0062464.1 MGP_LPJ_G0027558.1 mouse_genomes_project 3 98884669 98902461 - MGP_LPJ_P0062464 Polr3c protein_coding protein_coding MGP_LPJ_T0062465.1 MGP_LPJ_G0027558.1 mouse_genomes_project 3 98889610 98897409 - MGP_LPJ_P0062465 Polr3c protein_coding nonsense_mediated_decay MGP_LPJ_T0062466.1 MGP_LPJ_G0027558.1 mouse_genomes_project 3 98892311 98902496 - Polr3c protein_coding retained_intron MGP_LPJ_T0062467.1 MGP_LPJ_G0027558.1 mouse_genomes_project 3 98897009 98902474 - MGP_LPJ_P0062467 Polr3c protein_coding protein_coding MGP_LPJ_T0062468.1 MGP_LPJ_G0027558.1 mouse_genomes_project 3 98897012 98902495 - MGP_LPJ_P0062468 Polr3c protein_coding protein_coding MGP_LPJ_T0007764.1 MGP_LPJ_G0006353.1 mouse_genomes_project 3 148582050 148582975 + Gm42708 lincRNA lincRNA MGP_LPJ_T0013925.1 MGP_LPJ_G0012016.1 mouse_genomes_project 3 21226616 21226992 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014057.1 MGP_LPJ_G0012148.1 mouse_genomes_project 3 67711596 67712544 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004242.1 MGP_LPJ_G0003735.1 mouse_genomes_project 3 34531766 34539311 + Mccc1os antisense antisense MGP_LPJ_T0004243.1 MGP_LPJ_G0003735.1 mouse_genomes_project 3 34531846 34542237 + Mccc1os antisense antisense MGP_LPJ_T0004244.1 MGP_LPJ_G0003735.1 mouse_genomes_project 3 34532365 34559124 + Mccc1os antisense antisense MGP_LPJ_T0014202.1 MGP_LPJ_G0012293.1 mouse_genomes_project 3 111421740 111422119 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014149.1 MGP_LPJ_G0012240.1 mouse_genomes_project 3 97861529 97861676 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007711.1 MGP_LPJ_G0006306.1 mouse_genomes_project 3 132726335 133013249 + lincRNA lincRNA MGP_LPJ_T0063072.1 MGP_LPJ_G0027703.1 mouse_genomes_project 3 111393652 111414888 - MGP_LPJ_P0063072 Sars protein_coding protein_coding MGP_LPJ_T0063073.1 MGP_LPJ_G0027703.1 mouse_genomes_project 3 111395399 111414859 - MGP_LPJ_P0063073 Sars protein_coding protein_coding MGP_LPJ_T0063074.1 MGP_LPJ_G0027703.1 mouse_genomes_project 3 111397018 111414833 - MGP_LPJ_P0063074 Sars protein_coding protein_coding MGP_LPJ_T0063075.1 MGP_LPJ_G0027703.1 mouse_genomes_project 3 111398137 111414899 - MGP_LPJ_P0063075 Sars protein_coding protein_coding MGP_LPJ_T0063076.1 MGP_LPJ_G0027703.1 mouse_genomes_project 3 111403184 111414846 - Sars protein_coding retained_intron MGP_LPJ_T0001241.1 MGP_LPJ_G0001161.1 mouse_genomes_project 3 52403744 52406400 + TEC TEC MGP_LPJ_T0014270.1 MGP_LPJ_G0012361.1 mouse_genomes_project 3 135558362 135559380 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004377.1 MGP_LPJ_G0003826.1 mouse_genomes_project 3 125250592 125256574 + A530020G20Rik antisense antisense MGP_LPJ_T0004378.1 MGP_LPJ_G0003826.1 mouse_genomes_project 3 125250602 125251457 + A530020G20Rik antisense antisense MGP_LPJ_T0004379.1 MGP_LPJ_G0003826.1 mouse_genomes_project 3 125250652 125253984 + A530020G20Rik antisense antisense MGP_LPJ_T0064249.1 MGP_LPJ_G0027922.1 mouse_genomes_project 3 158059938 158232716 - MGP_LPJ_P0064249 St6galnac5 protein_coding protein_coding MGP_LPJ_T0064250.1 MGP_LPJ_G0027922.1 mouse_genomes_project 3 158225888 158232522 - St6galnac5 protein_coding processed_transcript MGP_LPJ_T0001160.1 MGP_LPJ_G0001082.1 mouse_genomes_project 3 28379643 28381642 - TEC TEC MGP_LPJ_T0001362.1 MGP_LPJ_G0001282.1 mouse_genomes_project 3 131178094 131181809 - TEC TEC MGP_LPJ_T0064143.1 MGP_LPJ_G0027909.1 mouse_genomes_project 3 156617870 156728791 + MGP_LPJ_P0064143 Adgrl4 protein_coding protein_coding MGP_LPJ_T0064144.1 MGP_LPJ_G0027909.1 mouse_genomes_project 3 156617912 156681473 + MGP_LPJ_P0064144 Adgrl4 protein_coding protein_coding MGP_LPJ_T0064145.1 MGP_LPJ_G0027909.1 mouse_genomes_project 3 156618257 156679269 + Adgrl4 protein_coding processed_transcript MGP_LPJ_T0064146.1 MGP_LPJ_G0027909.1 mouse_genomes_project 3 156619079 156681444 + Adgrl4 protein_coding retained_intron MGP_LPJ_T0064147.1 MGP_LPJ_G0027909.1 mouse_genomes_project 3 156681347 156689713 + Adgrl4 protein_coding processed_transcript MGP_LPJ_T0064148.1 MGP_LPJ_G0027909.1 mouse_genomes_project 3 156699701 156704411 + Adgrl4 protein_coding processed_transcript MGP_LPJ_T0014184.1 MGP_LPJ_G0012275.1 mouse_genomes_project 3 106326344 106326744 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098541.1 MGP_LPJ_G0036815.1 mouse_genomes_project 3 96425046 96425924 - Gm43774 sense_intronic sense_intronic MGP_LPJ_T0063637.1 MGP_LPJ_G0027807.1 mouse_genomes_project 3 134845068 134862476 + MGP_LPJ_P0063637 Etnppl protein_coding protein_coding MGP_LPJ_T0063638.1 MGP_LPJ_G0027807.1 mouse_genomes_project 3 134845189 134865185 + MGP_LPJ_P0063638 Etnppl protein_coding protein_coding MGP_LPJ_T0063639.1 MGP_LPJ_G0027807.1 mouse_genomes_project 3 134845192 134849243 + Etnppl protein_coding retained_intron MGP_LPJ_T0063640.1 MGP_LPJ_G0027807.1 mouse_genomes_project 3 134845219 134849261 + Etnppl protein_coding retained_intron MGP_LPJ_T0063641.1 MGP_LPJ_G0027807.1 mouse_genomes_project 3 134845314 134862344 + MGP_LPJ_P0063641 Etnppl protein_coding protein_coding MGP_LPJ_T0063642.1 MGP_LPJ_G0027807.1 mouse_genomes_project 3 134854126 134857331 + MGP_LPJ_P0063642 Etnppl protein_coding protein_coding MGP_LPJ_T0102104.1 MGP_LPJ_G0040141.1 mouse_genomes_project 3 92260321 92262204 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0064101.1 MGP_LPJ_G0027905.1 mouse_genomes_project 3 151557446 151600836 - MGP_LPJ_P0064101 Samd13 protein_coding protein_coding MGP_LPJ_T0064102.1 MGP_LPJ_G0027905.1 mouse_genomes_project 3 151558364 151597660 - MGP_LPJ_P0064102 Samd13 protein_coding protein_coding MGP_LPJ_T0064103.1 MGP_LPJ_G0027905.1 mouse_genomes_project 3 151558375 151597772 - MGP_LPJ_P0064103 Samd13 protein_coding protein_coding MGP_LPJ_T0064104.1 MGP_LPJ_G0027905.1 mouse_genomes_project 3 151558460 151600719 - MGP_LPJ_P0064104 Samd13 protein_coding protein_coding MGP_LPJ_T0064107.1 MGP_LPJ_G0027905.1 mouse_genomes_project 3 151595701 151600715 - Samd13 protein_coding retained_intron MGP_LPJ_T0064297.1 MGP_LPJ_G0027930.1 mouse_genomes_project 3 159918644 159930344 - Tyw3 protein_coding processed_transcript MGP_LPJ_T0064298.1 MGP_LPJ_G0027930.1 mouse_genomes_project 3 159918877 159934423 - MGP_LPJ_P0064298 Tyw3 protein_coding protein_coding MGP_LPJ_T0064299.1 MGP_LPJ_G0027930.1 mouse_genomes_project 3 159923366 159934501 - MGP_LPJ_P0064299 Tyw3 protein_coding protein_coding MGP_LPJ_T0100705.1 MGP_LPJ_G0038968.1 mouse_genomes_project 3 118776968 118777100 + Gm22337 snoRNA snoRNA MGP_LPJ_T0060030.1 MGP_LPJ_G0027035.1 mouse_genomes_project 3 17852590 17894035 - MGP_LPJ_P0060030 Hps3 protein_coding protein_coding MGP_LPJ_T0060031.1 MGP_LPJ_G0027035.1 mouse_genomes_project 3 17852596 17894000 - Hps3 protein_coding retained_intron MGP_LPJ_T0060032.1 MGP_LPJ_G0027035.1 mouse_genomes_project 3 17854333 17872837 - Hps3 protein_coding processed_transcript MGP_LPJ_T0060033.1 MGP_LPJ_G0027035.1 mouse_genomes_project 3 17854336 17894022 - MGP_LPJ_P0060033 Hps3 protein_coding protein_coding MGP_LPJ_T0060034.1 MGP_LPJ_G0027035.1 mouse_genomes_project 3 17860505 17871643 - Hps3 protein_coding processed_transcript MGP_LPJ_T0060035.1 MGP_LPJ_G0027035.1 mouse_genomes_project 3 17869940 17894022 - Hps3 protein_coding retained_intron MGP_LPJ_T0060036.1 MGP_LPJ_G0027035.1 mouse_genomes_project 3 17871235 17894014 - Hps3 protein_coding retained_intron MGP_LPJ_T0060037.1 MGP_LPJ_G0027035.1 mouse_genomes_project 3 17873662 17894022 - Hps3 protein_coding retained_intron MGP_LPJ_T0060038.1 MGP_LPJ_G0027035.1 mouse_genomes_project 3 17873927 17894016 - Hps3 protein_coding processed_transcript MGP_LPJ_T0060039.1 MGP_LPJ_G0027035.1 mouse_genomes_project 3 17875070 17894014 - Hps3 protein_coding retained_intron MGP_LPJ_T0060040.1 MGP_LPJ_G0027035.1 mouse_genomes_project 3 17893547 17894022 - Hps3 protein_coding processed_transcript MGP_LPJ_T0059887.1 MGP_LPJ_G0026992.1 mouse_genomes_project 3 6296233 6381864 - MGP_LPJ_P0059887 Tpd52 protein_coding protein_coding MGP_LPJ_T0059888.1 MGP_LPJ_G0026992.1 mouse_genomes_project 3 6299266 6381619 - MGP_LPJ_P0059888 Tpd52 protein_coding protein_coding MGP_LPJ_T0059889.1 MGP_LPJ_G0026992.1 mouse_genomes_project 3 6300068 6381564 - MGP_LPJ_P0059889 Tpd52 protein_coding protein_coding MGP_LPJ_T0059890.1 MGP_LPJ_G0026992.1 mouse_genomes_project 3 6300238 6339516 - MGP_LPJ_P0059890 Tpd52 protein_coding protein_coding MGP_LPJ_T0059891.1 MGP_LPJ_G0026992.1 mouse_genomes_project 3 6303453 6339518 - MGP_LPJ_P0059891 Tpd52 protein_coding protein_coding MGP_LPJ_T0059892.1 MGP_LPJ_G0026992.1 mouse_genomes_project 3 6303621 6381580 - MGP_LPJ_P0059892 Tpd52 protein_coding protein_coding MGP_LPJ_T0059893.1 MGP_LPJ_G0026992.1 mouse_genomes_project 3 6303729 6337751 - MGP_LPJ_P0059893 Tpd52 protein_coding protein_coding MGP_LPJ_T0059894.1 MGP_LPJ_G0026992.1 mouse_genomes_project 3 6303804 6381619 - MGP_LPJ_P0059894 Tpd52 protein_coding protein_coding MGP_LPJ_T0059895.1 MGP_LPJ_G0026992.1 mouse_genomes_project 3 6321070 6381578 - Tpd52 protein_coding processed_transcript MGP_LPJ_T0059896.1 MGP_LPJ_G0026992.1 mouse_genomes_project 3 6321132 6381619 - MGP_LPJ_P0059896 Tpd52 protein_coding nonsense_mediated_decay MGP_LPJ_T0007710.1 MGP_LPJ_G0006305.1 mouse_genomes_project 3 132052452 132054600 + Gm43053 lincRNA lincRNA MGP_LPJ_T0014177.1 MGP_LPJ_G0012268.1 mouse_genomes_project 3 104976196 104976664 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004393.1 MGP_LPJ_G0003838.1 mouse_genomes_project 3 133909104 133920441 + Gm42697 antisense antisense MGP_LPJ_T0001223.1 MGP_LPJ_G0001145.1 mouse_genomes_project 3 50819963 50820505 + TEC TEC MGP_LPJ_T0060473.1 MGP_LPJ_G0027114.1 mouse_genomes_project 3 37602927 37734211 + MGP_LPJ_P0060473 Fat4 protein_coding protein_coding MGP_LPJ_T0060474.1 MGP_LPJ_G0027114.1 mouse_genomes_project 3 37606929 37669715 + Fat4 protein_coding retained_intron MGP_LPJ_T0007687.1 MGP_LPJ_G0006289.1 mouse_genomes_project 3 120117231 120117655 + 4930512P04Rik lincRNA lincRNA MGP_LPJ_T0001377.1 MGP_LPJ_G0001296.1 mouse_genomes_project 3 134816415 134819254 + TEC TEC MGP_LPJ_T0062074.1 MGP_LPJ_G0027482.1 mouse_genomes_project 3 96364161 96372205 + MGP_LPJ_P0062074 Celf3 protein_coding protein_coding MGP_LPJ_T0062075.1 MGP_LPJ_G0027482.1 mouse_genomes_project 3 96365697 96379039 + MGP_LPJ_P0062075 Celf3 protein_coding protein_coding MGP_LPJ_T0062076.1 MGP_LPJ_G0027482.1 mouse_genomes_project 3 96365944 96379040 + MGP_LPJ_P0062076 Celf3 protein_coding protein_coding MGP_LPJ_T0062077.1 MGP_LPJ_G0027482.1 mouse_genomes_project 3 96365973 96379043 + MGP_LPJ_P0062077 Celf3 protein_coding protein_coding MGP_LPJ_T0062078.1 MGP_LPJ_G0027482.1 mouse_genomes_project 3 96365983 96374454 + Celf3 protein_coding retained_intron MGP_LPJ_T0062079.1 MGP_LPJ_G0027482.1 mouse_genomes_project 3 96369441 96374097 + Celf3 protein_coding processed_transcript MGP_LPJ_T0062080.1 MGP_LPJ_G0027482.1 mouse_genomes_project 3 96369608 96379039 + Celf3 protein_coding processed_transcript MGP_LPJ_T0062081.1 MGP_LPJ_G0027482.1 mouse_genomes_project 3 96371213 96379039 + Celf3 protein_coding retained_intron MGP_LPJ_T0062082.1 MGP_LPJ_G0027482.1 mouse_genomes_project 3 96371250 96373825 + MGP_LPJ_P0062082 Celf3 protein_coding protein_coding MGP_LPJ_T0062083.1 MGP_LPJ_G0027482.1 mouse_genomes_project 3 96371257 96374170 + MGP_LPJ_P0062083 Celf3 protein_coding protein_coding MGP_LPJ_T0062084.1 MGP_LPJ_G0027482.1 mouse_genomes_project 3 96372163 96379028 + Celf3 protein_coding retained_intron MGP_LPJ_T0062085.1 MGP_LPJ_G0027482.1 mouse_genomes_project 3 96373531 96375497 + Celf3 protein_coding retained_intron MGP_LPJ_T0062086.1 MGP_LPJ_G0027482.1 mouse_genomes_project 3 96374087 96376446 + Celf3 protein_coding retained_intron MGP_LPJ_T0007521.1 MGP_LPJ_G0006163.1 mouse_genomes_project 3 35079347 35086679 - Gm11548 lincRNA lincRNA MGP_LPJ_T0062986.1 MGP_LPJ_G0027683.1 mouse_genomes_project 3 110833283 110836149 + MGP_LPJ_P0062986 Gstm5 protein_coding protein_coding MGP_LPJ_T0062987.1 MGP_LPJ_G0027683.1 mouse_genomes_project 3 110833298 110836038 + MGP_LPJ_P0062987 Gstm5 protein_coding nonsense_mediated_decay MGP_LPJ_T0062988.1 MGP_LPJ_G0027683.1 mouse_genomes_project 3 110833308 110836149 + MGP_LPJ_P0062988 Gstm5 protein_coding nonsense_mediated_decay MGP_LPJ_T0062989.1 MGP_LPJ_G0027683.1 mouse_genomes_project 3 110833403 110835808 + MGP_LPJ_P0062989 Gstm5 protein_coding protein_coding MGP_LPJ_T0062990.1 MGP_LPJ_G0027683.1 mouse_genomes_project 3 110833416 110836012 + MGP_LPJ_P0062990 Gstm5 protein_coding protein_coding MGP_LPJ_T0062991.1 MGP_LPJ_G0027683.1 mouse_genomes_project 3 110833709 110836141 + MGP_LPJ_P0062991 Gstm5 protein_coding protein_coding MGP_LPJ_T0060820.1 MGP_LPJ_G0027179.1 mouse_genomes_project 3 58630991 58727357 + MGP_LPJ_P0060820 Med12l protein_coding protein_coding MGP_LPJ_T0060821.1 MGP_LPJ_G0027179.1 mouse_genomes_project 3 58631653 58946542 + MGP_LPJ_P0060821 Med12l protein_coding protein_coding MGP_LPJ_T0060822.1 MGP_LPJ_G0027179.1 mouse_genomes_project 3 58632144 58946270 + MGP_LPJ_P0060822 Med12l protein_coding protein_coding MGP_LPJ_T0060823.1 MGP_LPJ_G0027179.1 mouse_genomes_project 3 58632144 58946270 + MGP_LPJ_P0060823 Med12l protein_coding protein_coding MGP_LPJ_T0060824.1 MGP_LPJ_G0027179.1 mouse_genomes_project 3 58632144 58726257 + MGP_LPJ_P0060824 Med12l protein_coding protein_coding MGP_LPJ_T0060844.1 MGP_LPJ_G0027179.1 mouse_genomes_project 3 58892753 58943761 + MGP_LPJ_P0060844 Med12l protein_coding nonsense_mediated_decay MGP_LPJ_T0014068.1 MGP_LPJ_G0012159.1 mouse_genomes_project 3 70163558 70164429 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001400.1 MGP_LPJ_G0001319.1 mouse_genomes_project 3 151202935 151204253 + TEC TEC MGP_LPJ_T0063973.1 MGP_LPJ_G0027874.1 mouse_genomes_project 3 148888467 148902732 - MGP_LPJ_P0063973 Lmo4 protein_coding protein_coding MGP_LPJ_T0063974.1 MGP_LPJ_G0027874.1 mouse_genomes_project 3 148888467 148905821 - MGP_LPJ_P0063974 Lmo4 protein_coding protein_coding MGP_LPJ_T0063975.1 MGP_LPJ_G0027874.1 mouse_genomes_project 3 148888570 148902668 - MGP_LPJ_P0063975 Lmo4 protein_coding protein_coding MGP_LPJ_T0063976.1 MGP_LPJ_G0027874.1 mouse_genomes_project 3 148888621 148905821 - MGP_LPJ_P0063976 Lmo4 protein_coding protein_coding MGP_LPJ_T0063977.1 MGP_LPJ_G0027874.1 mouse_genomes_project 3 148889000 148895183 - Lmo4 protein_coding retained_intron MGP_LPJ_T0063978.1 MGP_LPJ_G0027874.1 mouse_genomes_project 3 148894349 148903563 - MGP_LPJ_P0063978 Lmo4 protein_coding protein_coding MGP_LPJ_T0063979.1 MGP_LPJ_G0027874.1 mouse_genomes_project 3 148901106 148905781 - Lmo4 protein_coding retained_intron MGP_LPJ_T0063980.1 MGP_LPJ_G0027874.1 mouse_genomes_project 3 148901958 148902636 - Lmo4 protein_coding retained_intron MGP_LPJ_T0013981.1 MGP_LPJ_G0012072.1 mouse_genomes_project 3 44724744 44725003 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014196.1 MGP_LPJ_G0012287.1 mouse_genomes_project 3 110802922 110806058 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060640.1 MGP_LPJ_G0027140.1 mouse_genomes_project 3 51543023 51630905 + MGP_LPJ_P0060640 Foxo1 protein_coding protein_coding MGP_LPJ_T0060134.1 MGP_LPJ_G0027053.1 mouse_genomes_project 3 26785261 26819165 + MGP_LPJ_P0060134 Slc2a2 protein_coding protein_coding MGP_LPJ_T0060135.1 MGP_LPJ_G0027053.1 mouse_genomes_project 3 26785375 26815282 + MGP_LPJ_P0060135 Slc2a2 protein_coding nonsense_mediated_decay MGP_LPJ_T0060136.1 MGP_LPJ_G0027053.1 mouse_genomes_project 3 26809322 26816133 + Slc2a2 protein_coding retained_intron MGP_LPJ_T0098569.1 MGP_LPJ_G0036843.1 mouse_genomes_project 3 106759552 106765610 - sense_intronic sense_intronic MGP_LPJ_T0010575.1 MGP_LPJ_G0008693.1 mouse_genomes_project 3 133860201 133860360 - Gm24515 miRNA miRNA MGP_LPJ_T0099448.1 MGP_LPJ_G0037711.1 mouse_genomes_project 3 142144217 142144322 + Gm25080 snRNA snRNA MGP_LPJ_T0014332.1 MGP_LPJ_G0012423.1 mouse_genomes_project 3 157281632 157282188 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001307.1 MGP_LPJ_G0001227.1 mouse_genomes_project 3 100275809 100281640 + TEC TEC MGP_LPJ_T0062368.1 MGP_LPJ_G0027530.1 mouse_genomes_project 3 98031724 98048083 + MGP_LPJ_P0062368 Anp32e protein_coding protein_coding MGP_LPJ_T0062369.1 MGP_LPJ_G0027530.1 mouse_genomes_project 3 98031729 98048153 + MGP_LPJ_P0062369 Anp32e protein_coding protein_coding MGP_LPJ_T0062370.1 MGP_LPJ_G0027530.1 mouse_genomes_project 3 98031771 98047960 + MGP_LPJ_P0062370 Anp32e protein_coding protein_coding MGP_LPJ_T0062371.1 MGP_LPJ_G0027530.1 mouse_genomes_project 3 98031832 98049787 + MGP_LPJ_P0062371 Anp32e protein_coding protein_coding MGP_LPJ_T0062372.1 MGP_LPJ_G0027530.1 mouse_genomes_project 3 98031987 98048065 + MGP_LPJ_P0062372 Anp32e protein_coding nonsense_mediated_decay MGP_LPJ_T0062373.1 MGP_LPJ_G0027530.1 mouse_genomes_project 3 98032028 98047836 + MGP_LPJ_P0062373 Anp32e protein_coding protein_coding MGP_LPJ_T0062374.1 MGP_LPJ_G0027530.1 mouse_genomes_project 3 98032043 98049909 + MGP_LPJ_P0062374 Anp32e protein_coding protein_coding MGP_LPJ_T0062375.1 MGP_LPJ_G0027530.1 mouse_genomes_project 3 98032982 98039618 + MGP_LPJ_P0062375 Anp32e protein_coding protein_coding MGP_LPJ_T0062376.1 MGP_LPJ_G0027530.1 mouse_genomes_project 3 98046634 98048041 + Anp32e protein_coding retained_intron MGP_LPJ_T0014102.1 MGP_LPJ_G0012193.1 mouse_genomes_project 3 83381978 83382477 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098570.1 MGP_LPJ_G0036844.1 mouse_genomes_project 3 106782594 106788314 - Gm42702 sense_intronic sense_intronic MGP_LPJ_T0007502.1 MGP_LPJ_G0006149.1 mouse_genomes_project 3 32111259 32174836 - lincRNA lincRNA MGP_LPJ_T0013934.1 MGP_LPJ_G0012025.1 mouse_genomes_project 3 27896699 27896838 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062540.1 MGP_LPJ_G0027574.1 mouse_genomes_project 3 100257333 100349546 + Notch2 protein_coding retained_intron MGP_LPJ_T0062541.1 MGP_LPJ_G0027574.1 mouse_genomes_project 3 100257344 100399814 + MGP_LPJ_P0062541 Notch2 protein_coding protein_coding MGP_LPJ_T0007598.1 MGP_LPJ_G0006220.1 mouse_genomes_project 3 80242480 80246462 + 4930589L23Rik lincRNA lincRNA MGP_LPJ_T0007752.1 MGP_LPJ_G0006342.1 mouse_genomes_project 3 147990743 147992377 + Gm43613 lincRNA lincRNA MGP_LPJ_T0061352.1 MGP_LPJ_G0027305.1 mouse_genomes_project 3 88934323 88940340 + MGP_LPJ_P0061352 Sh2d2a protein_coding protein_coding MGP_LPJ_T0061353.1 MGP_LPJ_G0027305.1 mouse_genomes_project 3 88934573 88943273 + MGP_LPJ_P0061353 Sh2d2a protein_coding protein_coding MGP_LPJ_T0061354.1 MGP_LPJ_G0027305.1 mouse_genomes_project 3 88934579 88937505 + Sh2d2a protein_coding retained_intron MGP_LPJ_T0064078.1 MGP_LPJ_G0027899.1 mouse_genomes_project 3 151346319 151358624 - MGP_LPJ_P0064078 Spata1 protein_coding protein_coding MGP_LPJ_T0064079.1 MGP_LPJ_G0027899.1 mouse_genomes_project 3 151346325 151398043 - MGP_LPJ_P0064079 Spata1 protein_coding protein_coding MGP_LPJ_T0064080.1 MGP_LPJ_G0027899.1 mouse_genomes_project 3 151346326 151403950 - MGP_LPJ_P0064080 Spata1 protein_coding protein_coding MGP_LPJ_T0064081.1 MGP_LPJ_G0027899.1 mouse_genomes_project 3 151354824 151368087 - MGP_LPJ_P0064081 Spata1 protein_coding protein_coding MGP_LPJ_T0064082.1 MGP_LPJ_G0027899.1 mouse_genomes_project 3 151358510 151374451 - Spata1 protein_coding processed_transcript MGP_LPJ_T0064083.1 MGP_LPJ_G0027899.1 mouse_genomes_project 3 151366602 151403906 - Spata1 protein_coding processed_transcript MGP_LPJ_T0064084.1 MGP_LPJ_G0027899.1 mouse_genomes_project 3 151376336 151399313 - MGP_LPJ_P0064084 Spata1 protein_coding protein_coding MGP_LPJ_T0014151.1 MGP_LPJ_G0012242.1 mouse_genomes_project 3 97990065 97993740 + processed_pseudogene processed_pseudogene MGP_LPJ_T0061975.1 MGP_LPJ_G0027418.1 mouse_genomes_project 3 92358597 92360537 - MGP_LPJ_P0061975 Gm5849 protein_coding protein_coding MGP_LPJ_T0099446.1 MGP_LPJ_G0037709.1 mouse_genomes_project 3 137202772 137202879 + Gm23196 snRNA snRNA MGP_LPJ_T0004402.1 MGP_LPJ_G0003845.1 mouse_genomes_project 3 139753361 139755818 - 4930539J05Rik antisense antisense MGP_LPJ_T0004403.1 MGP_LPJ_G0003845.1 mouse_genomes_project 3 139753378 139754912 - 4930539J05Rik antisense antisense MGP_LPJ_T0007557.1 MGP_LPJ_G0006189.1 mouse_genomes_project 3 51470943 51473183 + Gm37170 lincRNA lincRNA MGP_LPJ_T0001207.1 MGP_LPJ_G0001129.1 mouse_genomes_project 3 47154318 47154427 + TEC TEC MGP_LPJ_T0062428.1 MGP_LPJ_G0027550.1 mouse_genomes_project 3 98766368 98796082 + MGP_LPJ_P0062428 Lix1l protein_coding protein_coding MGP_LPJ_T0062429.1 MGP_LPJ_G0027550.1 mouse_genomes_project 3 98788356 98792140 + Lix1l protein_coding retained_intron MGP_LPJ_T0061129.1 MGP_LPJ_G0027253.1 mouse_genomes_project 3 80489719 80519895 - MGP_LPJ_P0061129 protein_coding unknown_likely_coding MGP_LPJ_T0061130.1 MGP_LPJ_G0027253.1 mouse_genomes_project 3 80507719 80529572 - MGP_LPJ_P0061130 protein_coding protein_coding MGP_LPJ_T0061131.1 MGP_LPJ_G0027253.1 mouse_genomes_project 3 80514791 80529567 - MGP_LPJ_P0061131 protein_coding protein_coding MGP_LPJ_T0061132.1 MGP_LPJ_G0027253.1 mouse_genomes_project 3 80514920 80519921 - protein_coding processed_transcript MGP_LPJ_T0063540.1 MGP_LPJ_G0027789.1 mouse_genomes_project 3 131684149 131686645 + MGP_LPJ_P0063540 Neurog2 protein_coding protein_coding MGP_LPJ_T0063053.1 MGP_LPJ_G0027700.1 mouse_genomes_project 3 111328117 111344764 + MGP_LPJ_P0063053 Mybphl protein_coding protein_coding MGP_LPJ_T0060775.1 MGP_LPJ_G0027167.1 mouse_genomes_project 3 56979818 57111197 - MGP_LPJ_P0060775 Wwtr1 protein_coding protein_coding MGP_LPJ_T0060776.1 MGP_LPJ_G0027167.1 mouse_genomes_project 3 56979951 57111279 - MGP_LPJ_P0060776 Wwtr1 protein_coding protein_coding MGP_LPJ_T0063046.1 MGP_LPJ_G0027697.1 mouse_genomes_project 3 111168498 111185411 - MGP_LPJ_P0063046 Sypl2 protein_coding protein_coding MGP_LPJ_T0063047.1 MGP_LPJ_G0027697.1 mouse_genomes_project 3 111174327 111185406 - Sypl2 protein_coding retained_intron MGP_LPJ_T0014037.1 MGP_LPJ_G0012128.1 mouse_genomes_project 3 62599289 62599871 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099436.1 MGP_LPJ_G0037699.1 mouse_genomes_project 3 112927593 112927699 + Gm25681 snRNA snRNA MGP_LPJ_T0100704.1 MGP_LPJ_G0038967.1 mouse_genomes_project 3 118210866 118210998 - Gm23750 snoRNA snoRNA MGP_LPJ_T0014273.1 MGP_LPJ_G0012364.1 mouse_genomes_project 3 137104788 137106993 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001399.1 MGP_LPJ_G0001318.1 mouse_genomes_project 3 148332051 148339148 + TEC TEC MGP_LPJ_T0007692.1 MGP_LPJ_G0006294.1 mouse_genomes_project 3 124301808 124569569 - lincRNA lincRNA MGP_LPJ_T0007693.1 MGP_LPJ_G0006294.1 mouse_genomes_project 3 124389512 124569568 - lincRNA lincRNA MGP_LPJ_T0007694.1 MGP_LPJ_G0006294.1 mouse_genomes_project 3 124395127 124569550 - lincRNA lincRNA MGP_LPJ_T0007695.1 MGP_LPJ_G0006294.1 mouse_genomes_project 3 124465696 124569527 - lincRNA lincRNA MGP_LPJ_T0014314.1 MGP_LPJ_G0012405.1 mouse_genomes_project 3 147009059 147009153 - processed_pseudogene processed_pseudogene MGP_LPJ_T0062335.1 MGP_LPJ_G0027523.1 mouse_genomes_project 3 97840925 97902453 - MGP_LPJ_P0062335 Rprd2 protein_coding protein_coding MGP_LPJ_T0062336.1 MGP_LPJ_G0027523.1 mouse_genomes_project 3 97840928 97902460 - MGP_LPJ_P0062336 Rprd2 protein_coding protein_coding MGP_LPJ_T0062337.1 MGP_LPJ_G0027523.1 mouse_genomes_project 3 97851192 97857419 - Rprd2 protein_coding retained_intron MGP_LPJ_T0062338.1 MGP_LPJ_G0027523.1 mouse_genomes_project 3 97852890 97902479 - MGP_LPJ_P0062338 Rprd2 protein_coding protein_coding MGP_LPJ_T0062339.1 MGP_LPJ_G0027523.1 mouse_genomes_project 3 97853705 97857397 - Rprd2 protein_coding processed_transcript MGP_LPJ_T0062340.1 MGP_LPJ_G0027523.1 mouse_genomes_project 3 97864771 97902564 - Rprd2 protein_coding retained_intron MGP_LPJ_T0060349.1 MGP_LPJ_G0027091.1 mouse_genomes_project 3 34490605 34532540 - MGP_LPJ_P0060349 Mccc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0060350.1 MGP_LPJ_G0027091.1 mouse_genomes_project 3 34491126 34532609 - MGP_LPJ_P0060350 Mccc1 protein_coding protein_coding MGP_LPJ_T0060351.1 MGP_LPJ_G0027091.1 mouse_genomes_project 3 34491132 34492403 - Mccc1 protein_coding retained_intron MGP_LPJ_T0060352.1 MGP_LPJ_G0027091.1 mouse_genomes_project 3 34493020 34500386 - Mccc1 protein_coding retained_intron MGP_LPJ_T0060353.1 MGP_LPJ_G0027091.1 mouse_genomes_project 3 34505452 34527684 - Mccc1 protein_coding retained_intron MGP_LPJ_T0060354.1 MGP_LPJ_G0027091.1 mouse_genomes_project 3 34507265 34508589 - Mccc1 protein_coding retained_intron MGP_LPJ_T0060355.1 MGP_LPJ_G0027091.1 mouse_genomes_project 3 34507797 34521991 - MGP_LPJ_P0060355 Mccc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0060356.1 MGP_LPJ_G0027091.1 mouse_genomes_project 3 34516993 34532572 - MGP_LPJ_P0060356 Mccc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0059863.1 MGP_LPJ_G0026984.1 mouse_genomes_project 3 2853943 2869955 - MGP_LPJ_P0059863 Pex2 protein_coding protein_coding MGP_LPJ_T0059864.1 MGP_LPJ_G0026984.1 mouse_genomes_project 3 2853943 2869955 - MGP_LPJ_P0059864 Pex2 protein_coding protein_coding MGP_LPJ_T0059865.1 MGP_LPJ_G0026984.1 mouse_genomes_project 3 2854254 2857485 - MGP_LPJ_P0059865 Pex2 protein_coding protein_coding MGP_LPJ_T0059866.1 MGP_LPJ_G0026984.1 mouse_genomes_project 3 2854255 2869950 - MGP_LPJ_P0059866 Pex2 protein_coding protein_coding MGP_LPJ_T0059867.1 MGP_LPJ_G0026984.1 mouse_genomes_project 3 2854255 2870044 - MGP_LPJ_P0059867 Pex2 protein_coding protein_coding MGP_LPJ_T0059868.1 MGP_LPJ_G0026984.1 mouse_genomes_project 3 2854259 2869933 - MGP_LPJ_P0059868 Pex2 protein_coding protein_coding MGP_LPJ_T0001257.1 MGP_LPJ_G0001177.1 mouse_genomes_project 3 57235724 57237021 - TEC TEC MGP_LPJ_T0102102.1 MGP_LPJ_G0040139.1 mouse_genomes_project 3 91292020 91295198 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0007614.1 MGP_LPJ_G0006235.1 mouse_genomes_project 3 87114210 87116983 + Gm37933 lincRNA lincRNA MGP_LPJ_T0099401.1 MGP_LPJ_G0037664.1 mouse_genomes_project 3 66147047 66147200 - Gm26442 snRNA snRNA MGP_LPJ_T0004324.1 MGP_LPJ_G0003794.1 mouse_genomes_project 3 98356335 98358822 + Gm20632 antisense antisense MGP_LPJ_T0062556.1 MGP_LPJ_G0027582.1 mouse_genomes_project 3 100965391 100981676 - MGP_LPJ_P0062556 protein_coding protein_coding MGP_LPJ_T0007603.1 MGP_LPJ_G0006225.1 mouse_genomes_project 3 82581352 82584488 + A830029E22Rik lincRNA lincRNA MGP_LPJ_T0063170.1 MGP_LPJ_G0027722.1 mouse_genomes_project 3 113317887 113322777 - MGP_LPJ_P0063170 Prmt6 protein_coding nonsense_mediated_decay MGP_LPJ_T0063171.1 MGP_LPJ_G0027722.1 mouse_genomes_project 3 113317890 113322772 - MGP_LPJ_P0063171 Prmt6 protein_coding protein_coding MGP_LPJ_T0063172.1 MGP_LPJ_G0027722.1 mouse_genomes_project 3 113320327 113322777 - MGP_LPJ_P0063172 Prmt6 protein_coding protein_coding MGP_LPJ_T0061646.1 MGP_LPJ_G0027357.1 mouse_genomes_project 3 90484347 90490099 + MGP_LPJ_P0061646 Gba protein_coding protein_coding MGP_LPJ_T0061647.1 MGP_LPJ_G0027357.1 mouse_genomes_project 3 90484355 90490101 + MGP_LPJ_P0061647 Gba protein_coding nonsense_mediated_decay MGP_LPJ_T0061648.1 MGP_LPJ_G0027357.1 mouse_genomes_project 3 90484359 90490101 + MGP_LPJ_P0061648 Gba protein_coding protein_coding MGP_LPJ_T0061649.1 MGP_LPJ_G0027357.1 mouse_genomes_project 3 90486904 90487808 + Gba protein_coding retained_intron MGP_LPJ_T0061650.1 MGP_LPJ_G0027357.1 mouse_genomes_project 3 90489636 90490386 + Gba protein_coding retained_intron MGP_LPJ_T0004267.1 MGP_LPJ_G0003754.1 mouse_genomes_project 3 58627607 58631325 - Gm43570 antisense antisense MGP_LPJ_T0014014.1 MGP_LPJ_G0012105.1 mouse_genomes_project 3 57063648 57064198 + processed_pseudogene processed_pseudogene MGP_LPJ_T0064122.1 MGP_LPJ_G0027908.1 mouse_genomes_project 3 153804297 153817273 - MGP_LPJ_P0064122 Adgrl2 protein_coding protein_coding MGP_LPJ_T0064123.1 MGP_LPJ_G0027908.1 mouse_genomes_project 3 153804300 153951065 - MGP_LPJ_P0064123 Adgrl2 protein_coding protein_coding MGP_LPJ_T0064124.1 MGP_LPJ_G0027908.1 mouse_genomes_project 3 153804565 153850028 - MGP_LPJ_P0064124 Adgrl2 protein_coding protein_coding MGP_LPJ_T0064125.1 MGP_LPJ_G0027908.1 mouse_genomes_project 3 153804569 153812496 - MGP_LPJ_P0064125 Adgrl2 protein_coding protein_coding MGP_LPJ_T0064126.1 MGP_LPJ_G0027908.1 mouse_genomes_project 3 153804570 153811704 - MGP_LPJ_P0064126 Adgrl2 protein_coding protein_coding MGP_LPJ_T0064127.1 MGP_LPJ_G0027908.1 mouse_genomes_project 3 153804790 153951034 - MGP_LPJ_P0064127 Adgrl2 protein_coding protein_coding MGP_LPJ_T0064128.1 MGP_LPJ_G0027908.1 mouse_genomes_project 3 153804807 153988637 - MGP_LPJ_P0064128 Adgrl2 protein_coding protein_coding MGP_LPJ_T0064129.1 MGP_LPJ_G0027908.1 mouse_genomes_project 3 153804807 153988637 - MGP_LPJ_P0064129 Adgrl2 protein_coding protein_coding MGP_LPJ_T0064130.1 MGP_LPJ_G0027908.1 mouse_genomes_project 3 153805654 153951150 - MGP_LPJ_P0064130 Adgrl2 protein_coding protein_coding MGP_LPJ_T0064131.1 MGP_LPJ_G0027908.1 mouse_genomes_project 3 153805807 153951163 - MGP_LPJ_P0064131 Adgrl2 protein_coding protein_coding MGP_LPJ_T0064132.1 MGP_LPJ_G0027908.1 mouse_genomes_project 3 153805807 153951163 - MGP_LPJ_P0064132 Adgrl2 protein_coding protein_coding MGP_LPJ_T0064133.1 MGP_LPJ_G0027908.1 mouse_genomes_project 3 153805807 153951163 - MGP_LPJ_P0064133 Adgrl2 protein_coding protein_coding MGP_LPJ_T0064134.1 MGP_LPJ_G0027908.1 mouse_genomes_project 3 153805807 153951163 - MGP_LPJ_P0064134 Adgrl2 protein_coding protein_coding MGP_LPJ_T0064135.1 MGP_LPJ_G0027908.1 mouse_genomes_project 3 153806436 153822651 - MGP_LPJ_P0064135 Adgrl2 protein_coding protein_coding MGP_LPJ_T0064136.1 MGP_LPJ_G0027908.1 mouse_genomes_project 3 153806459 153824109 - MGP_LPJ_P0064136 Adgrl2 protein_coding protein_coding MGP_LPJ_T0064137.1 MGP_LPJ_G0027908.1 mouse_genomes_project 3 153806478 153815121 - MGP_LPJ_P0064137 Adgrl2 protein_coding protein_coding MGP_LPJ_T0064138.1 MGP_LPJ_G0027908.1 mouse_genomes_project 3 153809044 153813899 - Adgrl2 protein_coding retained_intron MGP_LPJ_T0064139.1 MGP_LPJ_G0027908.1 mouse_genomes_project 3 153815896 153824243 - Adgrl2 protein_coding retained_intron MGP_LPJ_T0064140.1 MGP_LPJ_G0027908.1 mouse_genomes_project 3 153850845 153951011 - MGP_LPJ_P0064140 Adgrl2 protein_coding unknown_likely_coding MGP_LPJ_T0064141.1 MGP_LPJ_G0027908.1 mouse_genomes_project 3 153881372 153987398 - Adgrl2 protein_coding retained_intron MGP_LPJ_T0064142.1 MGP_LPJ_G0027908.1 mouse_genomes_project 3 153950335 153987564 - Adgrl2 protein_coding retained_intron MGP_LPJ_T0007663.1 MGP_LPJ_G0006269.1 mouse_genomes_project 3 105288346 105289610 + Gm42682 lincRNA lincRNA MGP_LPJ_T0059986.1 MGP_LPJ_G0027026.1 mouse_genomes_project 3 16375380 16376983 + MGP_LPJ_P0059986 protein_coding protein_coding MGP_LPJ_T0062665.1 MGP_LPJ_G0027611.1 mouse_genomes_project 3 105396134 105515988 - MGP_LPJ_P0062665 protein_coding protein_coding MGP_LPJ_T0062666.1 MGP_LPJ_G0027611.1 mouse_genomes_project 3 105396340 105398318 - protein_coding processed_transcript MGP_LPJ_T0062667.1 MGP_LPJ_G0027611.1 mouse_genomes_project 3 105396376 105515988 - MGP_LPJ_P0062667 protein_coding protein_coding MGP_LPJ_T0062668.1 MGP_LPJ_G0027611.1 mouse_genomes_project 3 105499692 105515978 - MGP_LPJ_P0062668 protein_coding protein_coding MGP_LPJ_T0063564.1 MGP_LPJ_G0027794.1 mouse_genomes_project 3 133337250 133357328 + MGP_LPJ_P0063564 Pitx2 protein_coding protein_coding MGP_LPJ_T0063565.1 MGP_LPJ_G0027794.1 mouse_genomes_project 3 133337294 133357316 + MGP_LPJ_P0063565 Pitx2 protein_coding protein_coding MGP_LPJ_T0063566.1 MGP_LPJ_G0027794.1 mouse_genomes_project 3 133337298 133357329 + MGP_LPJ_P0063566 Pitx2 protein_coding protein_coding MGP_LPJ_T0063567.1 MGP_LPJ_G0027794.1 mouse_genomes_project 3 133337341 133341950 + MGP_LPJ_P0063567 Pitx2 protein_coding protein_coding MGP_LPJ_T0063568.1 MGP_LPJ_G0027794.1 mouse_genomes_project 3 133341319 133356635 + MGP_LPJ_P0063568 Pitx2 protein_coding protein_coding MGP_LPJ_T0063569.1 MGP_LPJ_G0027794.1 mouse_genomes_project 3 133351669 133354512 + Pitx2 protein_coding retained_intron MGP_LPJ_T0063570.1 MGP_LPJ_G0027794.1 mouse_genomes_project 3 133351709 133357326 + MGP_LPJ_P0063570 Pitx2 protein_coding protein_coding MGP_LPJ_T0063571.1 MGP_LPJ_G0027794.1 mouse_genomes_project 3 133352012 133354362 + MGP_LPJ_P0063571 Pitx2 protein_coding protein_coding MGP_LPJ_T0063668.1 MGP_LPJ_G0027815.1 mouse_genomes_project 3 135761043 135843293 + MGP_LPJ_P0063668 Papss1 protein_coding protein_coding MGP_LPJ_T0063669.1 MGP_LPJ_G0027815.1 mouse_genomes_project 3 135761140 135843292 + MGP_LPJ_P0063669 Papss1 protein_coding nonsense_mediated_decay MGP_LPJ_T0063670.1 MGP_LPJ_G0027815.1 mouse_genomes_project 3 135761171 135843292 + MGP_LPJ_P0063670 Papss1 protein_coding protein_coding MGP_LPJ_T0063671.1 MGP_LPJ_G0027815.1 mouse_genomes_project 3 135761174 135843293 + MGP_LPJ_P0063671 Papss1 protein_coding protein_coding MGP_LPJ_T0063672.1 MGP_LPJ_G0027815.1 mouse_genomes_project 3 135761210 135779618 + MGP_LPJ_P0063672 Papss1 protein_coding nonsense_mediated_decay MGP_LPJ_T0099457.1 MGP_LPJ_G0037720.1 mouse_genomes_project 3 162700739 162700846 - Gm23725 snRNA snRNA MGP_LPJ_T0013850.1 MGP_LPJ_G0011941.1 mouse_genomes_project 3 1478397 1478614 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007470.1 MGP_LPJ_G0006127.1 mouse_genomes_project 3 11075706 11076844 + lincRNA lincRNA MGP_LPJ_T0007471.1 MGP_LPJ_G0006127.1 mouse_genomes_project 3 11075733 11076845 + lincRNA lincRNA MGP_LPJ_T0007472.1 MGP_LPJ_G0006127.1 mouse_genomes_project 3 11075779 11076632 + lincRNA lincRNA MGP_LPJ_T0007473.1 MGP_LPJ_G0006127.1 mouse_genomes_project 3 11075957 11078648 + lincRNA lincRNA MGP_LPJ_T0014011.1 MGP_LPJ_G0012102.1 mouse_genomes_project 3 56769353 56769606 + processed_pseudogene processed_pseudogene MGP_LPJ_T0059901.1 MGP_LPJ_G0026995.1 mouse_genomes_project 3 7144528 7293818 - MGP_LPJ_P0059901 Pag1 protein_coding protein_coding MGP_LPJ_T0059902.1 MGP_LPJ_G0026995.1 mouse_genomes_project 3 7150131 7293769 - MGP_LPJ_P0059902 Pag1 protein_coding protein_coding MGP_LPJ_T0059903.1 MGP_LPJ_G0026995.1 mouse_genomes_project 3 7151000 7163236 - Pag1 protein_coding retained_intron MGP_LPJ_T0059904.1 MGP_LPJ_G0026995.1 mouse_genomes_project 3 7206173 7293502 - Pag1 protein_coding retained_intron MGP_LPJ_T0059905.1 MGP_LPJ_G0026995.1 mouse_genomes_project 3 7287576 7293769 - Pag1 protein_coding processed_transcript MGP_LPJ_T0014017.1 MGP_LPJ_G0012108.1 mouse_genomes_project 3 57359730 57360226 - processed_pseudogene processed_pseudogene MGP_LPJ_T0064333.1 MGP_LPJ_G0027937.1 mouse_genomes_project 3 163006309 163020546 + MGP_LPJ_P0064333 Zranb2 protein_coding protein_coding MGP_LPJ_T0064334.1 MGP_LPJ_G0027937.1 mouse_genomes_project 3 163006508 163020472 + MGP_LPJ_P0064334 Zranb2 protein_coding nonsense_mediated_decay MGP_LPJ_T0064335.1 MGP_LPJ_G0027937.1 mouse_genomes_project 3 163006508 163020472 + MGP_LPJ_P0064335 Zranb2 protein_coding protein_coding MGP_LPJ_T0064336.1 MGP_LPJ_G0027937.1 mouse_genomes_project 3 163006525 163015343 + MGP_LPJ_P0064336 Zranb2 protein_coding nonsense_mediated_decay MGP_LPJ_T0064337.1 MGP_LPJ_G0027937.1 mouse_genomes_project 3 163006537 163020512 + MGP_LPJ_P0064337 Zranb2 protein_coding protein_coding MGP_LPJ_T0064338.1 MGP_LPJ_G0027937.1 mouse_genomes_project 3 163006574 163019059 + Zranb2 protein_coding retained_intron MGP_LPJ_T0064339.1 MGP_LPJ_G0027937.1 mouse_genomes_project 3 163011191 163013907 + Zranb2 protein_coding retained_intron MGP_LPJ_T0064340.1 MGP_LPJ_G0027937.1 mouse_genomes_project 3 163012792 163018939 + MGP_LPJ_P0064340 Zranb2 protein_coding protein_coding MGP_LPJ_T0102081.1 MGP_LPJ_G0040118.1 mouse_genomes_project 3 20934350 20936853 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0060589.1 MGP_LPJ_G0027131.1 mouse_genomes_project 3 50440910 50463783 + MGP_LPJ_P0060589 Noct protein_coding protein_coding MGP_LPJ_T0060590.1 MGP_LPJ_G0027131.1 mouse_genomes_project 3 50440933 50463770 + MGP_LPJ_P0060590 Noct protein_coding protein_coding MGP_LPJ_T0007718.1 MGP_LPJ_G0006311.1 mouse_genomes_project 3 135072297 135076028 - lincRNA lincRNA MGP_LPJ_T0098549.1 MGP_LPJ_G0036823.1 mouse_genomes_project 3 103107636 103111161 - Gm43462 sense_intronic sense_intronic MGP_LPJ_T0014066.1 MGP_LPJ_G0012157.1 mouse_genomes_project 3 69880019 69880277 + processed_pseudogene processed_pseudogene MGP_LPJ_T0063473.1 MGP_LPJ_G0027784.1 mouse_genomes_project 3 130314251 130392495 + MGP_LPJ_P0063473 Arsj protein_coding protein_coding MGP_LPJ_T0061979.1 MGP_LPJ_G0027422.1 mouse_genomes_project 3 93785222 93786982 - MGP_LPJ_P0061979 Prr9 protein_coding protein_coding MGP_LPJ_T0010522.1 MGP_LPJ_G0008640.1 mouse_genomes_project 3 27533855 27533953 + Mir551b miRNA miRNA MGP_LPJ_T0063981.1 MGP_LPJ_G0027875.1 mouse_genomes_project 3 149147876 149298623 - MGP_LPJ_P0063981 Hs2st1 protein_coding protein_coding MGP_LPJ_T0063982.1 MGP_LPJ_G0027875.1 mouse_genomes_project 3 149173820 149298323 - MGP_LPJ_P0063982 Hs2st1 protein_coding nonsense_mediated_decay MGP_LPJ_T0063983.1 MGP_LPJ_G0027875.1 mouse_genomes_project 3 149296279 149298600 - Hs2st1 protein_coding retained_intron MGP_LPJ_T0059873.1 MGP_LPJ_G0026987.1 mouse_genomes_project 3 4821303 4881959 + MGP_LPJ_P0059873 Zc2hc1a protein_coding protein_coding MGP_LPJ_T0059874.1 MGP_LPJ_G0026987.1 mouse_genomes_project 3 4821306 4880198 + MGP_LPJ_P0059874 Zc2hc1a protein_coding protein_coding MGP_LPJ_T0059875.1 MGP_LPJ_G0026987.1 mouse_genomes_project 3 4866587 4879624 + Zc2hc1a protein_coding retained_intron MGP_LPJ_T0061498.1 MGP_LPJ_G0027336.1 mouse_genomes_project 3 89720466 89727745 - MGP_LPJ_P0061498 Rab25 protein_coding protein_coding MGP_LPJ_T0061499.1 MGP_LPJ_G0027336.1 mouse_genomes_project 3 89720746 89727694 - MGP_LPJ_P0061499 Rab25 protein_coding protein_coding MGP_LPJ_T0061500.1 MGP_LPJ_G0027336.1 mouse_genomes_project 3 89721113 89721952 - Rab25 protein_coding retained_intron MGP_LPJ_T0061501.1 MGP_LPJ_G0027336.1 mouse_genomes_project 3 89723079 89727727 - Rab25 protein_coding retained_intron MGP_LPJ_T0017903.1 MGP_LPJ_G0015420.1 mouse_genomes_project 3 51457136 51458521 + Gm38132 processed_transcript lincRNA MGP_LPJ_T0017904.1 MGP_LPJ_G0015420.1 mouse_genomes_project 3 51457165 51458178 + Gm38132 processed_transcript retained_intron MGP_LPJ_T0001364.1 MGP_LPJ_G0001284.1 mouse_genomes_project 3 131272666 131280362 - TEC TEC MGP_LPJ_T0011555.1 MGP_LPJ_G0009673.1 mouse_genomes_project 3 73586127 73586426 - Gm22538 misc_RNA misc_RNA MGP_LPJ_T0007735.1 MGP_LPJ_G0006327.1 mouse_genomes_project 3 141355145 141357448 - Gm43356 lincRNA lincRNA MGP_LPJ_T0007548.1 MGP_LPJ_G0006181.1 mouse_genomes_project 3 47703596 47711056 - lincRNA lincRNA MGP_LPJ_T0014174.1 MGP_LPJ_G0012265.1 mouse_genomes_project 3 103836148 103836585 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014043.1 MGP_LPJ_G0012134.1 mouse_genomes_project 3 64066258 64066507 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007537.1 MGP_LPJ_G0006176.1 mouse_genomes_project 3 40038107 40042634 - Gm16508 lincRNA lincRNA MGP_LPJ_T0007609.1 MGP_LPJ_G0006230.1 mouse_genomes_project 3 84216558 84218932 + Gm38096 lincRNA lincRNA MGP_LPJ_T0001178.1 MGP_LPJ_G0001100.1 mouse_genomes_project 3 33127801 33128432 - TEC TEC MGP_LPJ_T0062901.1 MGP_LPJ_G0027660.1 mouse_genomes_project 3 109344814 109392706 - MGP_LPJ_P0062901 Cept1 protein_coding protein_coding MGP_LPJ_T0062902.1 MGP_LPJ_G0027660.1 mouse_genomes_project 3 109345537 109392635 - MGP_LPJ_P0062902 Cept1 protein_coding protein_coding MGP_LPJ_T0062903.1 MGP_LPJ_G0027660.1 mouse_genomes_project 3 109345537 109392486 - MGP_LPJ_P0062903 Cept1 protein_coding protein_coding MGP_LPJ_T0062904.1 MGP_LPJ_G0027660.1 mouse_genomes_project 3 109347808 109392603 - MGP_LPJ_P0062904 Cept1 protein_coding protein_coding MGP_LPJ_T0062905.1 MGP_LPJ_G0027660.1 mouse_genomes_project 3 109362517 109392647 - MGP_LPJ_P0062905 Cept1 protein_coding protein_coding MGP_LPJ_T0062906.1 MGP_LPJ_G0027660.1 mouse_genomes_project 3 109375693 109392622 - MGP_LPJ_P0062906 Cept1 protein_coding nonsense_mediated_decay MGP_LPJ_T0062907.1 MGP_LPJ_G0027660.1 mouse_genomes_project 3 109383753 109392496 - MGP_LPJ_P0062907 Cept1 protein_coding protein_coding MGP_LPJ_T0059984.1 MGP_LPJ_G0027024.1 mouse_genomes_project 3 15845757 15849101 + MGP_LPJ_P0059984 Bhlhe22 protein_coding protein_coding MGP_LPJ_T0007754.1 MGP_LPJ_G0006344.1 mouse_genomes_project 3 148075228 148077360 + 1700001N15Rik lincRNA lincRNA MGP_LPJ_T0013983.1 MGP_LPJ_G0012074.1 mouse_genomes_project 3 45598274 45598516 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010550.1 MGP_LPJ_G0008668.1 mouse_genomes_project 3 91344627 91344685 - Mir7669 miRNA miRNA MGP_LPJ_T0001315.1 MGP_LPJ_G0001235.1 mouse_genomes_project 3 110823281 110825164 + TEC TEC MGP_LPJ_T0001343.1 MGP_LPJ_G0001263.1 mouse_genomes_project 3 127025804 127028422 - TEC TEC MGP_LPJ_T0061395.1 MGP_LPJ_G0027315.1 mouse_genomes_project 3 89148978 89162929 + MGP_LPJ_P0061395 Gpatch4 protein_coding protein_coding MGP_LPJ_T0061396.1 MGP_LPJ_G0027315.1 mouse_genomes_project 3 89148978 89162926 + MGP_LPJ_P0061396 Gpatch4 protein_coding protein_coding MGP_LPJ_T0061397.1 MGP_LPJ_G0027315.1 mouse_genomes_project 3 89148979 89161596 + Gpatch4 protein_coding retained_intron MGP_LPJ_T0061398.1 MGP_LPJ_G0027315.1 mouse_genomes_project 3 89148994 89162136 + MGP_LPJ_P0061398 Gpatch4 protein_coding protein_coding MGP_LPJ_T0061399.1 MGP_LPJ_G0027315.1 mouse_genomes_project 3 89148998 89162912 + MGP_LPJ_P0061399 Gpatch4 protein_coding protein_coding MGP_LPJ_T0014028.1 MGP_LPJ_G0012119.1 mouse_genomes_project 3 59460587 59460988 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014048.1 MGP_LPJ_G0012139.1 mouse_genomes_project 3 66042939 66045403 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004348.1 MGP_LPJ_G0003811.1 mouse_genomes_project 3 107743535 107753493 + Gm42956 antisense antisense MGP_LPJ_T0014225.1 MGP_LPJ_G0012316.1 mouse_genomes_project 3 118906015 118906451 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007545.1 MGP_LPJ_G0006180.1 mouse_genomes_project 3 40269670 40276795 - Gm43733 lincRNA lincRNA MGP_LPJ_T0007546.1 MGP_LPJ_G0006180.1 mouse_genomes_project 3 40270627 40276825 - Gm43733 lincRNA lincRNA MGP_LPJ_T0007547.1 MGP_LPJ_G0006180.1 mouse_genomes_project 3 40270710 40271641 - Gm43733 lincRNA lincRNA MGP_LPJ_T0004408.1 MGP_LPJ_G0003848.1 mouse_genomes_project 3 142305039 142307242 - Gm43087 antisense antisense MGP_LPJ_T0100675.1 MGP_LPJ_G0038938.1 mouse_genomes_project 3 67660830 67660962 - Gm25919 snoRNA snoRNA MGP_LPJ_T0062350.1 MGP_LPJ_G0027525.1 mouse_genomes_project 3 97955715 97964262 - MGP_LPJ_P0062350 protein_coding protein_coding MGP_LPJ_T0014136.1 MGP_LPJ_G0012227.1 mouse_genomes_project 3 94956455 94957954 + processed_pseudogene processed_pseudogene MGP_LPJ_T0063355.1 MGP_LPJ_G0027761.1 mouse_genomes_project 3 125490617 125550698 - MGP_LPJ_P0063355 Abcd3 protein_coding protein_coding MGP_LPJ_T0063356.1 MGP_LPJ_G0027761.1 mouse_genomes_project 3 125490750 125550834 - MGP_LPJ_P0063356 Abcd3 protein_coding protein_coding MGP_LPJ_T0063357.1 MGP_LPJ_G0027761.1 mouse_genomes_project 3 125491599 125550698 - MGP_LPJ_P0063357 Abcd3 protein_coding nonsense_mediated_decay MGP_LPJ_T0063358.1 MGP_LPJ_G0027761.1 mouse_genomes_project 3 125498039 125500506 - Abcd3 protein_coding retained_intron MGP_LPJ_T0063359.1 MGP_LPJ_G0027761.1 mouse_genomes_project 3 125518779 125550441 - Abcd3 protein_coding processed_transcript MGP_LPJ_T0063360.1 MGP_LPJ_G0027761.1 mouse_genomes_project 3 125529590 125550729 - Abcd3 protein_coding retained_intron MGP_LPJ_T0059988.1 MGP_LPJ_G0027028.1 mouse_genomes_project 3 17017550 17045724 + MGP_LPJ_P0059988 Mtfr1 protein_coding protein_coding MGP_LPJ_T0059989.1 MGP_LPJ_G0027028.1 mouse_genomes_project 3 17017552 17049749 + MGP_LPJ_P0059989 Mtfr1 protein_coding protein_coding MGP_LPJ_T0059990.1 MGP_LPJ_G0027028.1 mouse_genomes_project 3 17017570 17049400 + MGP_LPJ_P0059990 Mtfr1 protein_coding protein_coding MGP_LPJ_T0059991.1 MGP_LPJ_G0027028.1 mouse_genomes_project 3 17018333 17050847 + MGP_LPJ_P0059991 Mtfr1 protein_coding protein_coding MGP_LPJ_T0059992.1 MGP_LPJ_G0027028.1 mouse_genomes_project 3 17018488 17049586 + MGP_LPJ_P0059992 Mtfr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0059993.1 MGP_LPJ_G0027028.1 mouse_genomes_project 3 17018497 17045733 + MGP_LPJ_P0059993 Mtfr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0059994.1 MGP_LPJ_G0027028.1 mouse_genomes_project 3 17018537 17041588 + MGP_LPJ_P0059994 Mtfr1 protein_coding protein_coding MGP_LPJ_T0059995.1 MGP_LPJ_G0027028.1 mouse_genomes_project 3 17041608 17046252 + Mtfr1 protein_coding retained_intron MGP_LPJ_T0099388.1 MGP_LPJ_G0037651.1 mouse_genomes_project 3 52021577 52021684 - Gm22798 snRNA snRNA MGP_LPJ_T0100712.1 MGP_LPJ_G0038975.1 mouse_genomes_project 3 131004353 131004485 + Gm25501 snoRNA snoRNA MGP_LPJ_T0062931.1 MGP_LPJ_G0027665.1 mouse_genomes_project 3 109922062 109923964 + MGP_LPJ_P0062931 Kcna3 protein_coding protein_coding MGP_LPJ_T0061968.1 MGP_LPJ_G0027415.1 mouse_genomes_project 3 92064284 92065352 + MGP_LPJ_P0061968 S100a8 protein_coding protein_coding MGP_LPJ_T0061969.1 MGP_LPJ_G0027415.1 mouse_genomes_project 3 92064619 92065281 + S100a8 protein_coding retained_intron MGP_LPJ_T0064003.1 MGP_LPJ_G0027883.1 mouse_genomes_project 3 149791587 149821377 - MGP_LPJ_P0064003 Clca1 protein_coding protein_coding MGP_LPJ_T0064004.1 MGP_LPJ_G0027883.1 mouse_genomes_project 3 149792327 149796944 - Clca1 protein_coding processed_transcript MGP_LPJ_T0064005.1 MGP_LPJ_G0027883.1 mouse_genomes_project 3 149801731 149807624 - Clca1 protein_coding processed_transcript MGP_LPJ_T0010569.1 MGP_LPJ_G0008687.1 mouse_genomes_project 3 126332332 126332389 - Mir7657 miRNA miRNA MGP_LPJ_T0061163.1 MGP_LPJ_G0027260.1 mouse_genomes_project 3 82776663 82796784 + Asic5 protein_coding processed_transcript MGP_LPJ_T0061164.1 MGP_LPJ_G0027260.1 mouse_genomes_project 3 82794028 82818798 + MGP_LPJ_P0061164 Asic5 protein_coding protein_coding MGP_LPJ_T0100727.1 MGP_LPJ_G0038990.1 mouse_genomes_project 3 162673723 162673855 + Gm24373 snoRNA snoRNA MGP_LPJ_T0064288.1 MGP_LPJ_G0027928.1 mouse_genomes_project 3 159275911 159595315 + MGP_LPJ_P0064288 Slc44a5 protein_coding protein_coding MGP_LPJ_T0064289.1 MGP_LPJ_G0027928.1 mouse_genomes_project 3 159276240 159591376 + MGP_LPJ_P0064289 Slc44a5 protein_coding unknown_likely_coding MGP_LPJ_T0064290.1 MGP_LPJ_G0027928.1 mouse_genomes_project 3 159542674 159545718 + Slc44a5 protein_coding processed_transcript MGP_LPJ_T0064291.1 MGP_LPJ_G0027928.1 mouse_genomes_project 3 159579328 159595315 + Slc44a5 protein_coding retained_intron MGP_LPJ_T0059886.1 MGP_LPJ_G0026991.1 mouse_genomes_project 3 6174638 6294559 - MGP_LPJ_P0059886 Mrps28 protein_coding protein_coding MGP_LPJ_T0060328.1 MGP_LPJ_G0027089.1 mouse_genomes_project 3 34276672 34278579 + Atp11b protein_coding retained_intron MGP_LPJ_T0060329.1 MGP_LPJ_G0027089.1 mouse_genomes_project 3 34276700 34355123 + Atp11b protein_coding processed_transcript MGP_LPJ_T0060330.1 MGP_LPJ_G0027089.1 mouse_genomes_project 3 34276700 34383187 + Atp11b protein_coding retained_intron MGP_LPJ_T0060331.1 MGP_LPJ_G0027089.1 mouse_genomes_project 3 34276700 34383192 + MGP_LPJ_P0060331 Atp11b protein_coding protein_coding MGP_LPJ_T0060332.1 MGP_LPJ_G0027089.1 mouse_genomes_project 3 34313471 34332300 + MGP_LPJ_P0060332 Atp11b protein_coding protein_coding MGP_LPJ_T0060333.1 MGP_LPJ_G0027089.1 mouse_genomes_project 3 34314962 34383190 + MGP_LPJ_P0060333 Atp11b protein_coding protein_coding MGP_LPJ_T0060334.1 MGP_LPJ_G0027089.1 mouse_genomes_project 3 34333173 34335618 + Atp11b protein_coding processed_transcript MGP_LPJ_T0060335.1 MGP_LPJ_G0027089.1 mouse_genomes_project 3 34352389 34354624 + Atp11b protein_coding retained_intron MGP_LPJ_T0060336.1 MGP_LPJ_G0027089.1 mouse_genomes_project 3 34365811 34383187 + Atp11b protein_coding retained_intron MGP_LPJ_T0060337.1 MGP_LPJ_G0027089.1 mouse_genomes_project 3 34366144 34383192 + MGP_LPJ_P0060337 Atp11b protein_coding protein_coding MGP_LPJ_T0013893.1 MGP_LPJ_G0011984.1 mouse_genomes_project 3 11981754 11981889 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062357.1 MGP_LPJ_G0027527.1 mouse_genomes_project 3 97979627 97987899 - MGP_LPJ_P0062357 BC028528 protein_coding protein_coding MGP_LPJ_T0062358.1 MGP_LPJ_G0027527.1 mouse_genomes_project 3 97979631 97987849 - MGP_LPJ_P0062358 BC028528 protein_coding protein_coding MGP_LPJ_T0062359.1 MGP_LPJ_G0027527.1 mouse_genomes_project 3 97980761 97987824 - MGP_LPJ_P0062359 BC028528 protein_coding protein_coding MGP_LPJ_T0062360.1 MGP_LPJ_G0027527.1 mouse_genomes_project 3 97983743 97987845 - BC028528 protein_coding processed_transcript MGP_LPJ_T0062361.1 MGP_LPJ_G0027527.1 mouse_genomes_project 3 97984230 97987875 - BC028528 protein_coding retained_intron MGP_LPJ_T0013870.1 MGP_LPJ_G0011961.1 mouse_genomes_project 3 6029250 6029563 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014133.1 MGP_LPJ_G0012224.1 mouse_genomes_project 3 94624316 94624708 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001231.1 MGP_LPJ_G0001152.1 mouse_genomes_project 3 51138942 51141556 - TEC TEC MGP_LPJ_T0014274.1 MGP_LPJ_G0012365.1 mouse_genomes_project 3 137288075 137288502 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014268.1 MGP_LPJ_G0012359.1 mouse_genomes_project 3 135171533 135173364 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013927.1 MGP_LPJ_G0012018.1 mouse_genomes_project 3 23098480 23098660 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014339.1 MGP_LPJ_G0012430.1 mouse_genomes_project 3 162882953 162883723 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007550.1 MGP_LPJ_G0006183.1 mouse_genomes_project 3 48205122 48222863 + Gm31415 lincRNA lincRNA MGP_LPJ_T0001222.1 MGP_LPJ_G0001144.1 mouse_genomes_project 3 50792469 50794570 - TEC TEC MGP_LPJ_T0014031.1 MGP_LPJ_G0012122.1 mouse_genomes_project 3 60525095 60525253 - processed_pseudogene processed_pseudogene MGP_LPJ_T0062555.1 MGP_LPJ_G0027581.1 mouse_genomes_project 3 100965389 100981760 - MGP_LPJ_P0062555 protein_coding protein_coding MGP_LPJ_T0101316.1 MGP_LPJ_G0039535.1 mouse_genomes_project 3 19603387 19654045 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101317.1 MGP_LPJ_G0039535.1 mouse_genomes_project 3 19603466 19613051 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101318.1 MGP_LPJ_G0039535.1 mouse_genomes_project 3 19603656 19603821 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0011546.1 MGP_LPJ_G0009664.1 mouse_genomes_project 3 17170089 17170401 + Gm22282 misc_RNA misc_RNA MGP_LPJ_T0100716.1 MGP_LPJ_G0038979.1 mouse_genomes_project 3 137879302 137879434 - Gm23011 snoRNA snoRNA MGP_LPJ_T0062013.1 MGP_LPJ_G0027452.1 mouse_genomes_project 3 94488805 94490406 - MGP_LPJ_P0062013 Lce1k protein_coding protein_coding MGP_LPJ_T0014112.1 MGP_LPJ_G0012203.1 mouse_genomes_project 3 87956874 87957170 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010541.1 MGP_LPJ_G0008659.1 mouse_genomes_project 3 82905991 82906054 - Mir7010 miRNA miRNA MGP_LPJ_T0059876.1 MGP_LPJ_G0026988.1 mouse_genomes_project 3 4894658 4936180 - MGP_LPJ_P0059876 Il7 protein_coding protein_coding MGP_LPJ_T0059877.1 MGP_LPJ_G0026988.1 mouse_genomes_project 3 4894752 4936741 - Il7 protein_coding processed_transcript MGP_LPJ_T0061688.1 MGP_LPJ_G0027362.1 mouse_genomes_project 3 90529293 90530521 + Krtcap2 protein_coding retained_intron MGP_LPJ_T0061689.1 MGP_LPJ_G0027362.1 mouse_genomes_project 3 90529665 90533059 + MGP_LPJ_P0061689 Krtcap2 protein_coding protein_coding MGP_LPJ_T0061690.1 MGP_LPJ_G0027362.1 mouse_genomes_project 3 90529761 90533037 + MGP_LPJ_P0061690 Krtcap2 protein_coding protein_coding MGP_LPJ_T0061691.1 MGP_LPJ_G0027362.1 mouse_genomes_project 3 90532194 90533050 + Krtcap2 protein_coding retained_intron MGP_LPJ_T0062570.1 MGP_LPJ_G0027587.1 mouse_genomes_project 3 101292649 101311945 - MGP_LPJ_P0062570 Hao2 protein_coding protein_coding MGP_LPJ_T0004384.1 MGP_LPJ_G0003831.1 mouse_genomes_project 3 127288703 127291823 - Gm43591 antisense antisense MGP_LPJ_T0001298.1 MGP_LPJ_G0001218.1 mouse_genomes_project 3 98042542 98045022 + TEC TEC MGP_LPJ_T0001179.1 MGP_LPJ_G0001101.1 mouse_genomes_project 3 33151278 33151392 + TEC TEC MGP_LPJ_T0007643.1 MGP_LPJ_G0006251.1 mouse_genomes_project 3 98522801 98539277 - lincRNA lincRNA MGP_LPJ_T0014267.1 MGP_LPJ_G0012358.1 mouse_genomes_project 3 135081690 135082202 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017895.1 MGP_LPJ_G0015417.1 mouse_genomes_project 3 44175285 44317805 - processed_transcript lincRNA MGP_LPJ_T0017896.1 MGP_LPJ_G0015417.1 mouse_genomes_project 3 44176198 44303219 - processed_transcript lincRNA MGP_LPJ_T0017897.1 MGP_LPJ_G0015417.1 mouse_genomes_project 3 44257570 44317750 - processed_transcript retained_intron MGP_LPJ_T0062282.1 MGP_LPJ_G0027515.1 mouse_genomes_project 3 97576543 97612187 + MGP_LPJ_P0062282 Ctss protein_coding protein_coding MGP_LPJ_T0062283.1 MGP_LPJ_G0027515.1 mouse_genomes_project 3 97576651 97612193 + MGP_LPJ_P0062283 Ctss protein_coding protein_coding MGP_LPJ_T0060147.1 MGP_LPJ_G0027056.1 mouse_genomes_project 3 27182923 27250171 + MGP_LPJ_P0060147 Egfem1 protein_coding protein_coding MGP_LPJ_T0060148.1 MGP_LPJ_G0027056.1 mouse_genomes_project 3 27183200 27706199 + MGP_LPJ_P0060148 Egfem1 protein_coding protein_coding MGP_LPJ_T0060149.1 MGP_LPJ_G0027056.1 mouse_genomes_project 3 27183470 27800387 + Egfem1 protein_coding retained_intron MGP_LPJ_T0060150.1 MGP_LPJ_G0027056.1 mouse_genomes_project 3 27183626 27814508 + MGP_LPJ_P0060150 Egfem1 protein_coding protein_coding MGP_LPJ_T0060151.1 MGP_LPJ_G0027056.1 mouse_genomes_project 3 27183664 27813809 + MGP_LPJ_P0060151 Egfem1 protein_coding protein_coding MGP_LPJ_T0060152.1 MGP_LPJ_G0027056.1 mouse_genomes_project 3 27575703 27777072 + Egfem1 protein_coding processed_transcript MGP_LPJ_T0060153.1 MGP_LPJ_G0027056.1 mouse_genomes_project 3 27627839 27813494 + MGP_LPJ_P0060153 Egfem1 protein_coding unknown_likely_coding MGP_LPJ_T0060154.1 MGP_LPJ_G0027056.1 mouse_genomes_project 3 27627864 27799494 + MGP_LPJ_P0060154 Egfem1 protein_coding protein_coding MGP_LPJ_T0007705.1 MGP_LPJ_G0006300.1 mouse_genomes_project 3 128113590 128203466 + Gm43731 lincRNA lincRNA MGP_LPJ_T0062408.1 MGP_LPJ_G0027539.1 mouse_genomes_project 3 98338045 98340666 + MGP_LPJ_P0062408 Hist2h2be protein_coding protein_coding MGP_LPJ_T0001219.1 MGP_LPJ_G0001141.1 mouse_genomes_project 3 50646371 50646482 + TEC TEC MGP_LPJ_T0059952.1 MGP_LPJ_G0027011.1 mouse_genomes_project 3 12282773 12312217 + MGP_LPJ_P0059952 E2f5 protein_coding protein_coding MGP_LPJ_T0059953.1 MGP_LPJ_G0027011.1 mouse_genomes_project 3 12282803 12312216 + MGP_LPJ_P0059953 E2f5 protein_coding protein_coding MGP_LPJ_T0099417.1 MGP_LPJ_G0037680.1 mouse_genomes_project 3 90481458 90481565 - Gm23269 snRNA snRNA MGP_LPJ_T0061937.1 MGP_LPJ_G0027404.1 mouse_genomes_project 3 91890740 91894099 - MGP_LPJ_P0061937 S100a1 protein_coding protein_coding MGP_LPJ_T0061938.1 MGP_LPJ_G0027404.1 mouse_genomes_project 3 91890743 91893985 - MGP_LPJ_P0061938 S100a1 protein_coding protein_coding MGP_LPJ_T0062846.1 MGP_LPJ_G0027644.1 mouse_genomes_project 3 108454628 108463826 - MGP_LPJ_P0062846 Ddx20 protein_coding protein_coding MGP_LPJ_T0062847.1 MGP_LPJ_G0027644.1 mouse_genomes_project 3 108455978 108463704 - MGP_LPJ_P0062847 Ddx20 protein_coding nonsense_mediated_decay MGP_LPJ_T0062848.1 MGP_LPJ_G0027644.1 mouse_genomes_project 3 108457847 108463696 - Ddx20 protein_coding retained_intron MGP_LPJ_T0062968.1 MGP_LPJ_G0027680.1 mouse_genomes_project 3 110589933 110604583 - MGP_LPJ_P0062968 Ahcyl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0062969.1 MGP_LPJ_G0027680.1 mouse_genomes_project 3 110589935 110623376 - MGP_LPJ_P0062969 Ahcyl1 protein_coding protein_coding MGP_LPJ_T0062970.1 MGP_LPJ_G0027680.1 mouse_genomes_project 3 110590768 110592412 - Ahcyl1 protein_coding processed_transcript MGP_LPJ_T0062971.1 MGP_LPJ_G0027680.1 mouse_genomes_project 3 110591298 110597390 - Ahcyl1 protein_coding retained_intron MGP_LPJ_T0062972.1 MGP_LPJ_G0027680.1 mouse_genomes_project 3 110592207 110594299 - Ahcyl1 protein_coding retained_intron MGP_LPJ_T0062973.1 MGP_LPJ_G0027680.1 mouse_genomes_project 3 110595065 110596325 - Ahcyl1 protein_coding retained_intron MGP_LPJ_T0062974.1 MGP_LPJ_G0027680.1 mouse_genomes_project 3 110597963 110622779 - MGP_LPJ_P0062974 Ahcyl1 protein_coding protein_coding MGP_LPJ_T0062975.1 MGP_LPJ_G0027680.1 mouse_genomes_project 3 110598551 110623321 - Ahcyl1 protein_coding retained_intron MGP_LPJ_T0060935.1 MGP_LPJ_G0027208.1 mouse_genomes_project 3 65554731 65582885 + MGP_LPJ_P0060935 Tiparp protein_coding protein_coding MGP_LPJ_T0060936.1 MGP_LPJ_G0027208.1 mouse_genomes_project 3 65554781 65574986 + MGP_LPJ_P0060936 Tiparp protein_coding protein_coding MGP_LPJ_T0060937.1 MGP_LPJ_G0027208.1 mouse_genomes_project 3 65573429 65579999 + Tiparp protein_coding processed_transcript MGP_LPJ_T0062680.1 MGP_LPJ_G0027614.1 mouse_genomes_project 3 105594211 105631433 + MGP_LPJ_P0062680 Csde1 protein_coding protein_coding MGP_LPJ_T0062681.1 MGP_LPJ_G0027614.1 mouse_genomes_project 3 105594276 105631240 + MGP_LPJ_P0062681 Csde1 protein_coding protein_coding MGP_LPJ_T0062682.1 MGP_LPJ_G0027614.1 mouse_genomes_project 3 105594282 105631435 + MGP_LPJ_P0062682 Csde1 protein_coding protein_coding MGP_LPJ_T0062683.1 MGP_LPJ_G0027614.1 mouse_genomes_project 3 105594289 105630951 + MGP_LPJ_P0062683 Csde1 protein_coding protein_coding MGP_LPJ_T0062684.1 MGP_LPJ_G0027614.1 mouse_genomes_project 3 105594333 105631053 + MGP_LPJ_P0062684 Csde1 protein_coding protein_coding MGP_LPJ_T0062685.1 MGP_LPJ_G0027614.1 mouse_genomes_project 3 105602300 105616021 + Csde1 protein_coding retained_intron MGP_LPJ_T0062686.1 MGP_LPJ_G0027614.1 mouse_genomes_project 3 105602393 105604172 + Csde1 protein_coding retained_intron MGP_LPJ_T0062687.1 MGP_LPJ_G0027614.1 mouse_genomes_project 3 105603463 105617149 + Csde1 protein_coding processed_transcript MGP_LPJ_T0062688.1 MGP_LPJ_G0027614.1 mouse_genomes_project 3 105613003 105617903 + Csde1 protein_coding processed_transcript MGP_LPJ_T0062689.1 MGP_LPJ_G0027614.1 mouse_genomes_project 3 105613262 105617328 + Csde1 protein_coding retained_intron MGP_LPJ_T0062690.1 MGP_LPJ_G0027614.1 mouse_genomes_project 3 105613291 105620060 + MGP_LPJ_P0062690 Csde1 protein_coding nonsense_mediated_decay MGP_LPJ_T0062691.1 MGP_LPJ_G0027614.1 mouse_genomes_project 3 105616456 105631035 + MGP_LPJ_P0062691 Csde1 protein_coding nonsense_mediated_decay MGP_LPJ_T0062692.1 MGP_LPJ_G0027614.1 mouse_genomes_project 3 105616805 105617505 + Csde1 protein_coding retained_intron MGP_LPJ_T0062693.1 MGP_LPJ_G0027614.1 mouse_genomes_project 3 105623257 105624330 + Csde1 protein_coding retained_intron MGP_LPJ_T0062694.1 MGP_LPJ_G0027614.1 mouse_genomes_project 3 105629302 105630381 + Csde1 protein_coding retained_intron MGP_LPJ_T0100689.1 MGP_LPJ_G0038952.1 mouse_genomes_project 3 89898722 89898857 + Gm25945 snoRNA snoRNA MGP_LPJ_T0063319.1 MGP_LPJ_G0027754.1 mouse_genomes_project 3 124841054 124857131 - MGP_LPJ_P0063319 Rwdd3 protein_coding protein_coding MGP_LPJ_T0063320.1 MGP_LPJ_G0027754.1 mouse_genomes_project 3 124841056 124842477 - Rwdd3 protein_coding retained_intron MGP_LPJ_T0063321.1 MGP_LPJ_G0027754.1 mouse_genomes_project 3 124841499 124844467 - MGP_LPJ_P0063321 Rwdd3 protein_coding protein_coding MGP_LPJ_T0063322.1 MGP_LPJ_G0027754.1 mouse_genomes_project 3 124841502 124857124 - MGP_LPJ_P0063322 Rwdd3 protein_coding protein_coding MGP_LPJ_T0063323.1 MGP_LPJ_G0027754.1 mouse_genomes_project 3 124841521 124857130 - MGP_LPJ_P0063323 Rwdd3 protein_coding protein_coding MGP_LPJ_T0063324.1 MGP_LPJ_G0027754.1 mouse_genomes_project 3 124841595 124857130 - MGP_LPJ_P0063324 Rwdd3 protein_coding protein_coding MGP_LPJ_T0063325.1 MGP_LPJ_G0027754.1 mouse_genomes_project 3 124841934 124857131 - MGP_LPJ_P0063325 Rwdd3 protein_coding protein_coding MGP_LPJ_T0063326.1 MGP_LPJ_G0027754.1 mouse_genomes_project 3 124843655 124857131 - Rwdd3 protein_coding retained_intron MGP_LPJ_T0063327.1 MGP_LPJ_G0027754.1 mouse_genomes_project 3 124854605 124857130 - Rwdd3 protein_coding retained_intron MGP_LPJ_T0060478.1 MGP_LPJ_G0027116.1 mouse_genomes_project 3 39411887 39428314 + MGP_LPJ_P0060478 Slc25a31 protein_coding protein_coding MGP_LPJ_T0014039.1 MGP_LPJ_G0012130.1 mouse_genomes_project 3 63037439 63038058 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101333.1 MGP_LPJ_G0039541.1 mouse_genomes_project 3 126585617 126585911 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0013919.1 MGP_LPJ_G0012010.1 mouse_genomes_project 3 18671286 18672880 + processed_pseudogene processed_pseudogene MGP_LPJ_T0061876.1 MGP_LPJ_G0027394.1 mouse_genomes_project 3 91599486 91605327 - MGP_LPJ_P0061876 Creb3l4 protein_coding unknown_likely_coding MGP_LPJ_T0007515.1 MGP_LPJ_G0006160.1 mouse_genomes_project 3 33782122 33801533 - Gm43003 lincRNA lincRNA MGP_LPJ_T0061995.1 MGP_LPJ_G0027437.1 mouse_genomes_project 3 94227917 94230751 - MGP_LPJ_P0061995 Ivl protein_coding protein_coding MGP_LPJ_T0014253.1 MGP_LPJ_G0012344.1 mouse_genomes_project 3 128187601 128187848 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007679.1 MGP_LPJ_G0006282.1 mouse_genomes_project 3 111323262 111323960 + Gm12525 lincRNA lincRNA MGP_LPJ_T0062950.1 MGP_LPJ_G0027675.1 mouse_genomes_project 3 110386114 110437080 - MGP_LPJ_P0062950 Slc6a17 protein_coding protein_coding MGP_LPJ_T0062951.1 MGP_LPJ_G0027675.1 mouse_genomes_project 3 110386119 110437080 - MGP_LPJ_P0062951 Slc6a17 protein_coding protein_coding MGP_LPJ_T0062952.1 MGP_LPJ_G0027675.1 mouse_genomes_project 3 110386120 110419497 - MGP_LPJ_P0062952 Slc6a17 protein_coding nonsense_mediated_decay MGP_LPJ_T0062953.1 MGP_LPJ_G0027675.1 mouse_genomes_project 3 110386122 110387278 - Slc6a17 protein_coding processed_transcript MGP_LPJ_T0062954.1 MGP_LPJ_G0027675.1 mouse_genomes_project 3 110401363 110436811 - Slc6a17 protein_coding processed_transcript MGP_LPJ_T0062955.1 MGP_LPJ_G0027675.1 mouse_genomes_project 3 110408700 110412118 - Slc6a17 protein_coding processed_transcript MGP_LPJ_T0062956.1 MGP_LPJ_G0027675.1 mouse_genomes_project 3 110408702 110437080 - Slc6a17 protein_coding retained_intron MGP_LPJ_T0062957.1 MGP_LPJ_G0027675.1 mouse_genomes_project 3 110414637 110437007 - Slc6a17 protein_coding processed_transcript MGP_LPJ_T0062958.1 MGP_LPJ_G0027675.1 mouse_genomes_project 3 110414683 110436396 - MGP_LPJ_P0062958 Slc6a17 protein_coding protein_coding MGP_LPJ_T0062959.1 MGP_LPJ_G0027675.1 mouse_genomes_project 3 110419637 110436386 - Slc6a17 protein_coding processed_transcript MGP_LPJ_T0061296.1 MGP_LPJ_G0027294.1 mouse_genomes_project 3 88105742 88204399 - MGP_LPJ_P0061296 Kirrel protein_coding protein_coding MGP_LPJ_T0061297.1 MGP_LPJ_G0027294.1 mouse_genomes_project 3 88105750 88204446 - MGP_LPJ_P0061297 Kirrel protein_coding protein_coding MGP_LPJ_T0061298.1 MGP_LPJ_G0027294.1 mouse_genomes_project 3 88111776 88204249 - MGP_LPJ_P0061298 Kirrel protein_coding protein_coding MGP_LPJ_T0063910.1 MGP_LPJ_G0027862.1 mouse_genomes_project 3 145794296 145796642 - MGP_LPJ_P0063910 Pdha2 protein_coding protein_coding MGP_LPJ_T0061075.1 MGP_LPJ_G0027242.1 mouse_genomes_project 3 75993298 76033848 - MGP_LPJ_P0061075 Pdcd10 protein_coding protein_coding MGP_LPJ_T0061076.1 MGP_LPJ_G0027242.1 mouse_genomes_project 3 76006087 76033817 - MGP_LPJ_P0061076 Pdcd10 protein_coding protein_coding MGP_LPJ_T0061077.1 MGP_LPJ_G0027242.1 mouse_genomes_project 3 76010590 76033895 - Pdcd10 protein_coding retained_intron MGP_LPJ_T0060938.1 MGP_LPJ_G0027209.1 mouse_genomes_project 3 65707341 65727005 + MGP_LPJ_P0060938 Lekr1 protein_coding protein_coding MGP_LPJ_T0060939.1 MGP_LPJ_G0027209.1 mouse_genomes_project 3 65707348 65725050 + Lekr1 protein_coding processed_transcript MGP_LPJ_T0060940.1 MGP_LPJ_G0027209.1 mouse_genomes_project 3 65707359 65783066 + Lekr1 protein_coding processed_transcript MGP_LPJ_T0060941.1 MGP_LPJ_G0027209.1 mouse_genomes_project 3 65707381 65709550 + Lekr1 protein_coding retained_intron MGP_LPJ_T0060942.1 MGP_LPJ_G0027209.1 mouse_genomes_project 3 65707395 65818520 + Lekr1 protein_coding processed_transcript MGP_LPJ_T0060943.1 MGP_LPJ_G0027209.1 mouse_genomes_project 3 65707430 65771236 + Lekr1 protein_coding processed_transcript MGP_LPJ_T0060944.1 MGP_LPJ_G0027209.1 mouse_genomes_project 3 65724878 65877664 + Lekr1 protein_coding processed_transcript MGP_LPJ_T0098250.1 MGP_LPJ_G0036531.1 mouse_genomes_project 3 90164146 90164265 + n-R5s197 rRNA rRNA MGP_LPJ_T0098586.1 MGP_LPJ_G0036860.1 mouse_genomes_project 3 108546070 108550552 - Gm43329 sense_intronic sense_intronic MGP_LPJ_T0059925.1 MGP_LPJ_G0027004.1 mouse_genomes_project 3 7829792 7833715 - MGP_LPJ_P0059925 Slc10a5 protein_coding protein_coding MGP_LPJ_T0004270.1 MGP_LPJ_G0003757.1 mouse_genomes_project 3 61165122 61170074 - Gm37696 antisense antisense MGP_LPJ_T0013977.1 MGP_LPJ_G0012068.1 mouse_genomes_project 3 43349058 43349467 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014285.1 MGP_LPJ_G0012376.1 mouse_genomes_project 3 139810738 139811067 + processed_pseudogene processed_pseudogene MGP_LPJ_T0060977.1 MGP_LPJ_G0027215.1 mouse_genomes_project 3 67463509 67492753 + MGP_LPJ_P0060977 Mlf1 protein_coding protein_coding MGP_LPJ_T0060978.1 MGP_LPJ_G0027215.1 mouse_genomes_project 3 67463537 67471124 + Mlf1 protein_coding processed_transcript MGP_LPJ_T0060979.1 MGP_LPJ_G0027215.1 mouse_genomes_project 3 67463554 67488029 + MGP_LPJ_P0060979 Mlf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0060980.1 MGP_LPJ_G0027215.1 mouse_genomes_project 3 67463560 67492758 + MGP_LPJ_P0060980 Mlf1 protein_coding protein_coding MGP_LPJ_T0060923.1 MGP_LPJ_G0027203.1 mouse_genomes_project 3 63976604 64007876 + MGP_LPJ_P0060923 Vmn2r1 protein_coding protein_coding MGP_LPJ_T0010530.1 MGP_LPJ_G0008648.1 mouse_genomes_project 3 35884575 35884685 - Gm24169 miRNA miRNA MGP_LPJ_T0062423.1 MGP_LPJ_G0027547.1 mouse_genomes_project 3 98740811 98744497 + MGP_LPJ_P0062423 Gm16253 protein_coding protein_coding MGP_LPJ_T0063502.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 130915554 131159519 - MGP_LPJ_P0063502 protein_coding unknown_likely_coding MGP_LPJ_T0063503.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 130915561 130997278 - MGP_LPJ_P0063503 protein_coding protein_coding MGP_LPJ_T0063504.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 130915563 130917952 - protein_coding retained_intron MGP_LPJ_T0063505.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 130915563 130939682 - MGP_LPJ_P0063505 protein_coding protein_coding MGP_LPJ_T0063506.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 130917891 130925065 - MGP_LPJ_P0063506 protein_coding protein_coding MGP_LPJ_T0063507.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 130917892 130925065 - MGP_LPJ_P0063507 protein_coding protein_coding MGP_LPJ_T0063508.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 130920853 130923621 - protein_coding retained_intron MGP_LPJ_T0063509.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 130928433 130930355 - protein_coding retained_intron MGP_LPJ_T0063510.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 130934067 130952367 - MGP_LPJ_P0063510 protein_coding protein_coding MGP_LPJ_T0063511.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 130936414 130952166 - MGP_LPJ_P0063511 protein_coding nonsense_mediated_decay MGP_LPJ_T0063512.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 130943407 131436307 - MGP_LPJ_P0063512 protein_coding protein_coding MGP_LPJ_T0063513.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 130946466 130997254 - protein_coding retained_intron MGP_LPJ_T0063514.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 130955320 131538154 - MGP_LPJ_P0063514 protein_coding protein_coding MGP_LPJ_T0063515.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 130956787 131436246 - MGP_LPJ_P0063515 protein_coding protein_coding MGP_LPJ_T0063516.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 131014207 131023145 - protein_coding retained_intron MGP_LPJ_T0063517.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 131023670 131436279 - MGP_LPJ_P0063517 protein_coding protein_coding MGP_LPJ_T0063518.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 131023740 131436279 - MGP_LPJ_P0063518 protein_coding protein_coding MGP_LPJ_T0063519.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 131029852 131160056 - MGP_LPJ_P0063519 protein_coding protein_coding MGP_LPJ_T0063520.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 131029852 131436215 - MGP_LPJ_P0063520 protein_coding protein_coding MGP_LPJ_T0063521.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 131078694 131225588 - MGP_LPJ_P0063521 protein_coding protein_coding MGP_LPJ_T0063522.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 131080868 131159949 - protein_coding retained_intron MGP_LPJ_T0063523.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 131082678 131436202 - MGP_LPJ_P0063523 protein_coding protein_coding MGP_LPJ_T0063524.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 131157429 131159915 - protein_coding retained_intron MGP_LPJ_T0063525.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 131347961 131436243 - protein_coding retained_intron MGP_LPJ_T0063526.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 131349591 131537806 - protein_coding retained_intron MGP_LPJ_T0063527.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 131534910 131538064 - protein_coding retained_intron MGP_LPJ_T0063528.1 MGP_LPJ_G0027786.1 mouse_genomes_project 3 131537466 131537805 - MGP_LPJ_P0063528 protein_coding protein_coding MGP_LPJ_T0004419.1 MGP_LPJ_G0003856.1 mouse_genomes_project 3 149507570 149508272 + antisense antisense MGP_LPJ_T0010536.1 MGP_LPJ_G0008654.1 mouse_genomes_project 3 65700410 65700549 + Mir8120 miRNA miRNA MGP_LPJ_T0014210.1 MGP_LPJ_G0012301.1 mouse_genomes_project 3 114446437 114447965 - processed_pseudogene processed_pseudogene MGP_LPJ_T0063725.1 MGP_LPJ_G0027826.1 mouse_genomes_project 3 138533530 138558751 + protein_coding processed_transcript MGP_LPJ_T0063726.1 MGP_LPJ_G0027826.1 mouse_genomes_project 3 138533537 138561304 + MGP_LPJ_P0063726 protein_coding protein_coding MGP_LPJ_T0063727.1 MGP_LPJ_G0027826.1 mouse_genomes_project 3 138533541 138535431 + protein_coding retained_intron MGP_LPJ_T0063728.1 MGP_LPJ_G0027826.1 mouse_genomes_project 3 138533866 138557362 + MGP_LPJ_P0063728 protein_coding protein_coding MGP_LPJ_T0063729.1 MGP_LPJ_G0027826.1 mouse_genomes_project 3 138539300 138545628 + protein_coding retained_intron MGP_LPJ_T0060079.1 MGP_LPJ_G0027044.1 mouse_genomes_project 3 24622279 24967067 + MGP_LPJ_P0060079 Spata16 protein_coding protein_coding MGP_LPJ_T0060080.1 MGP_LPJ_G0027044.1 mouse_genomes_project 3 24622309 24912748 + MGP_LPJ_P0060080 Spata16 protein_coding protein_coding MGP_LPJ_T0099421.1 MGP_LPJ_G0037684.1 mouse_genomes_project 3 91948013 91948160 - Gm23464 snRNA snRNA MGP_LPJ_T0007699.1 MGP_LPJ_G0006296.1 mouse_genomes_project 3 125434405 125444252 - Gm43608 lincRNA lincRNA MGP_LPJ_T0061347.1 MGP_LPJ_G0027303.1 mouse_genomes_project 3 88863276 88881164 - MGP_LPJ_P0061347 Ntrk1 protein_coding protein_coding MGP_LPJ_T0061400.1 MGP_LPJ_G0027316.1 mouse_genomes_project 3 89163455 89165431 - MGP_LPJ_P0061400 Apoa1bp protein_coding protein_coding MGP_LPJ_T0061970.1 MGP_LPJ_G0027416.1 mouse_genomes_project 3 92095107 92098184 - MGP_LPJ_P0061970 S100a9 protein_coding protein_coding MGP_LPJ_T0061971.1 MGP_LPJ_G0027416.1 mouse_genomes_project 3 92095107 92098194 - MGP_LPJ_P0061971 S100a9 protein_coding protein_coding MGP_LPJ_T0061454.1 MGP_LPJ_G0027327.1 mouse_genomes_project 3 89514162 89540390 + MGP_LPJ_P0061454 Paqr6 protein_coding protein_coding MGP_LPJ_T0061455.1 MGP_LPJ_G0027327.1 mouse_genomes_project 3 89514167 89540897 + MGP_LPJ_P0061455 Paqr6 protein_coding protein_coding MGP_LPJ_T0061456.1 MGP_LPJ_G0027327.1 mouse_genomes_project 3 89514169 89517399 + Paqr6 protein_coding processed_transcript MGP_LPJ_T0061457.1 MGP_LPJ_G0027327.1 mouse_genomes_project 3 89514171 89515381 + Paqr6 protein_coding retained_intron MGP_LPJ_T0007605.1 MGP_LPJ_G0006227.1 mouse_genomes_project 3 83603114 83621292 - Gm43348 lincRNA lincRNA MGP_LPJ_T0102092.1 MGP_LPJ_G0040129.1 mouse_genomes_project 3 79708548 79709073 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013864.1 MGP_LPJ_G0011955.1 mouse_genomes_project 3 4781929 4782948 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004352.1 MGP_LPJ_G0003814.1 mouse_genomes_project 3 109798901 109981251 - Gm27008 antisense antisense MGP_LPJ_T0004353.1 MGP_LPJ_G0003814.1 mouse_genomes_project 3 109823237 109983311 - Gm27008 antisense antisense MGP_LPJ_T0001369.1 MGP_LPJ_G0001289.1 mouse_genomes_project 3 131936182 131936858 - TEC TEC MGP_LPJ_T0007572.1 MGP_LPJ_G0006200.1 mouse_genomes_project 3 57684984 57734645 + 4921539H07Rik lincRNA lincRNA MGP_LPJ_T0007574.1 MGP_LPJ_G0006200.1 mouse_genomes_project 3 57733503 57737188 + 4921539H07Rik lincRNA lincRNA MGP_LPJ_T0014113.1 MGP_LPJ_G0012204.1 mouse_genomes_project 3 88046388 88047335 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013896.1 MGP_LPJ_G0011987.1 mouse_genomes_project 3 12197932 12198941 - processed_pseudogene processed_pseudogene MGP_LPJ_T0061313.1 MGP_LPJ_G0027299.1 mouse_genomes_project 3 88579369 88594092 + MGP_LPJ_P0061313 Etv3 protein_coding protein_coding MGP_LPJ_T0061314.1 MGP_LPJ_G0027299.1 mouse_genomes_project 3 88579540 88594078 + MGP_LPJ_P0061314 Etv3 protein_coding protein_coding MGP_LPJ_T0061315.1 MGP_LPJ_G0027299.1 mouse_genomes_project 3 88579569 88594092 + Etv3 protein_coding retained_intron MGP_LPJ_T0061316.1 MGP_LPJ_G0027299.1 mouse_genomes_project 3 88579576 88585008 + MGP_LPJ_P0061316 Etv3 protein_coding protein_coding MGP_LPJ_T0061317.1 MGP_LPJ_G0027299.1 mouse_genomes_project 3 88579580 88585011 + Etv3 protein_coding retained_intron MGP_LPJ_T0061993.1 MGP_LPJ_G0027435.1 mouse_genomes_project 3 94166153 94166384 - MGP_LPJ_P0061993 Sprr4 protein_coding protein_coding MGP_LPJ_T0098247.1 MGP_LPJ_G0036528.1 mouse_genomes_project 3 38378424 38378543 - n-R5s195 rRNA rRNA MGP_LPJ_T0007742.1 MGP_LPJ_G0006334.1 mouse_genomes_project 3 144291432 144295860 - Gm32693 lincRNA lincRNA MGP_LPJ_T0063990.1 MGP_LPJ_G0027877.1 mouse_genomes_project 3 149411852 149450093 - MGP_LPJ_P0063990 Sh3glb1 protein_coding protein_coding MGP_LPJ_T0063991.1 MGP_LPJ_G0027877.1 mouse_genomes_project 3 149413069 149425631 - MGP_LPJ_P0063991 Sh3glb1 protein_coding protein_coding MGP_LPJ_T0063992.1 MGP_LPJ_G0027877.1 mouse_genomes_project 3 149415085 149450306 - MGP_LPJ_P0063992 Sh3glb1 protein_coding protein_coding MGP_LPJ_T0063993.1 MGP_LPJ_G0027877.1 mouse_genomes_project 3 149417018 149450318 - MGP_LPJ_P0063993 Sh3glb1 protein_coding protein_coding MGP_LPJ_T0063994.1 MGP_LPJ_G0027877.1 mouse_genomes_project 3 149419520 149450188 - MGP_LPJ_P0063994 Sh3glb1 protein_coding protein_coding MGP_LPJ_T0063995.1 MGP_LPJ_G0027877.1 mouse_genomes_project 3 149420152 149436597 - MGP_LPJ_P0063995 Sh3glb1 protein_coding protein_coding MGP_LPJ_T0017919.1 MGP_LPJ_G0015427.1 mouse_genomes_project 3 98365812 98368870 + Gm20634 processed_transcript processed_transcript MGP_LPJ_T0062983.1 MGP_LPJ_G0027682.1 mouse_genomes_project 3 110814582 110830363 + MGP_LPJ_P0062983 Eps8l3 protein_coding protein_coding MGP_LPJ_T0062984.1 MGP_LPJ_G0027682.1 mouse_genomes_project 3 110814597 110818607 + Eps8l3 protein_coding processed_transcript MGP_LPJ_T0062985.1 MGP_LPJ_G0027682.1 mouse_genomes_project 3 110814615 110818983 + MGP_LPJ_P0062985 Eps8l3 protein_coding protein_coding MGP_LPJ_T0061759.1 MGP_LPJ_G0027377.1 mouse_genomes_project 3 90732121 90746369 + MGP_LPJ_P0061759 Pbxip1 protein_coding protein_coding MGP_LPJ_T0061760.1 MGP_LPJ_G0027377.1 mouse_genomes_project 3 90732127 90740940 + Pbxip1 protein_coding processed_transcript MGP_LPJ_T0061761.1 MGP_LPJ_G0027377.1 mouse_genomes_project 3 90732130 90741579 + MGP_LPJ_P0061761 Pbxip1 protein_coding protein_coding MGP_LPJ_T0061762.1 MGP_LPJ_G0027377.1 mouse_genomes_project 3 90732169 90740888 + MGP_LPJ_P0061762 Pbxip1 protein_coding protein_coding MGP_LPJ_T0061763.1 MGP_LPJ_G0027377.1 mouse_genomes_project 3 90732171 90740932 + MGP_LPJ_P0061763 Pbxip1 protein_coding protein_coding MGP_LPJ_T0063037.1 MGP_LPJ_G0027695.1 mouse_genomes_project 3 111152727 111157875 - MGP_LPJ_P0063037 Cyb561d1 protein_coding protein_coding MGP_LPJ_T0063038.1 MGP_LPJ_G0027695.1 mouse_genomes_project 3 111152811 111158253 - Cyb561d1 protein_coding processed_transcript MGP_LPJ_T0063039.1 MGP_LPJ_G0027695.1 mouse_genomes_project 3 111152811 111157875 - MGP_LPJ_P0063039 Cyb561d1 protein_coding protein_coding MGP_LPJ_T0063040.1 MGP_LPJ_G0027695.1 mouse_genomes_project 3 111155313 111157636 - MGP_LPJ_P0063040 Cyb561d1 protein_coding protein_coding MGP_LPJ_T0013949.1 MGP_LPJ_G0012040.1 mouse_genomes_project 3 34505843 34506164 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017955.1 MGP_LPJ_G0015440.1 mouse_genomes_project 3 127356250 127357103 - Snhg8 processed_transcript lincRNA MGP_LPJ_T0017956.1 MGP_LPJ_G0015440.1 mouse_genomes_project 3 127356253 127357029 - Snhg8 processed_transcript retained_intron MGP_LPJ_T0017957.1 MGP_LPJ_G0015440.1 mouse_genomes_project 3 127356255 127357032 - Snhg8 processed_transcript lincRNA MGP_LPJ_T0063054.1 MGP_LPJ_G0027701.1 mouse_genomes_project 3 111351027 111355366 + MGP_LPJ_P0063054 Psrc1 protein_coding protein_coding MGP_LPJ_T0063055.1 MGP_LPJ_G0027701.1 mouse_genomes_project 3 111351039 111352597 + Psrc1 protein_coding processed_transcript MGP_LPJ_T0063056.1 MGP_LPJ_G0027701.1 mouse_genomes_project 3 111351040 111353791 + Psrc1 protein_coding processed_transcript MGP_LPJ_T0063057.1 MGP_LPJ_G0027701.1 mouse_genomes_project 3 111351047 111355418 + MGP_LPJ_P0063057 Psrc1 protein_coding protein_coding MGP_LPJ_T0063058.1 MGP_LPJ_G0027701.1 mouse_genomes_project 3 111351067 111353572 + Psrc1 protein_coding processed_transcript MGP_LPJ_T0063059.1 MGP_LPJ_G0027701.1 mouse_genomes_project 3 111351104 111352598 + MGP_LPJ_P0063059 Psrc1 protein_coding protein_coding MGP_LPJ_T0063060.1 MGP_LPJ_G0027701.1 mouse_genomes_project 3 111351125 111353811 + Psrc1 protein_coding processed_transcript MGP_LPJ_T0063061.1 MGP_LPJ_G0027701.1 mouse_genomes_project 3 111351582 111353133 + Psrc1 protein_coding retained_intron MGP_LPJ_T0063062.1 MGP_LPJ_G0027701.1 mouse_genomes_project 3 111352042 111354062 + Psrc1 protein_coding retained_intron MGP_LPJ_T0063063.1 MGP_LPJ_G0027701.1 mouse_genomes_project 3 111352045 111353893 + Psrc1 protein_coding retained_intron MGP_LPJ_T0063064.1 MGP_LPJ_G0027701.1 mouse_genomes_project 3 111353253 111353901 + Psrc1 protein_coding processed_transcript MGP_LPJ_T0004298.1 MGP_LPJ_G0003778.1 mouse_genomes_project 3 90627026 90637036 + 4731419I09Rik antisense antisense MGP_LPJ_T0098252.1 MGP_LPJ_G0036533.1 mouse_genomes_project 3 131796986 131797072 + Gm23279 rRNA rRNA MGP_LPJ_T0011562.1 MGP_LPJ_G0009680.1 mouse_genomes_project 3 105655973 105656273 + Gm23820 misc_RNA misc_RNA MGP_LPJ_T0013869.1 MGP_LPJ_G0011960.1 mouse_genomes_project 3 5970050 5971280 - processed_pseudogene processed_pseudogene MGP_LPJ_T0061124.1 MGP_LPJ_G0027251.1 mouse_genomes_project 3 80306232 80309962 + MGP_LPJ_P0061124 4930579G24Rik protein_coding protein_coding MGP_LPJ_T0098571.1 MGP_LPJ_G0036845.1 mouse_genomes_project 3 106793985 106795642 - Gm42701 sense_intronic sense_intronic MGP_LPJ_T0001212.1 MGP_LPJ_G0001134.1 mouse_genomes_project 3 49904536 49908240 - TEC TEC MGP_LPJ_T0001172.1 MGP_LPJ_G0001094.1 mouse_genomes_project 3 31479187 31481625 - TEC TEC MGP_LPJ_T0014158.1 MGP_LPJ_G0012249.1 mouse_genomes_project 3 100443924 100445063 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001187.1 MGP_LPJ_G0001109.1 mouse_genomes_project 3 36289390 36291467 - TEC TEC MGP_LPJ_T0063939.1 MGP_LPJ_G0027868.1 mouse_genomes_project 3 147179432 147181881 + MGP_LPJ_P0063939 Gbp3 protein_coding protein_coding MGP_LPJ_T0063940.1 MGP_LPJ_G0027868.1 mouse_genomes_project 3 147179458 147193134 + MGP_LPJ_P0063940 Gbp3 protein_coding protein_coding MGP_LPJ_T0063941.1 MGP_LPJ_G0027868.1 mouse_genomes_project 3 147179549 147184117 + MGP_LPJ_P0063941 Gbp3 protein_coding protein_coding MGP_LPJ_T0063942.1 MGP_LPJ_G0027868.1 mouse_genomes_project 3 147179551 147193141 + MGP_LPJ_P0063942 Gbp3 protein_coding protein_coding MGP_LPJ_T0063943.1 MGP_LPJ_G0027868.1 mouse_genomes_project 3 147179581 147185443 + Gbp3 protein_coding processed_transcript MGP_LPJ_T0063944.1 MGP_LPJ_G0027868.1 mouse_genomes_project 3 147180352 147193139 + MGP_LPJ_P0063944 Gbp3 protein_coding protein_coding MGP_LPJ_T0063945.1 MGP_LPJ_G0027868.1 mouse_genomes_project 3 147181177 147184989 + MGP_LPJ_P0063945 Gbp3 protein_coding protein_coding MGP_LPJ_T0061877.1 MGP_LPJ_G0027395.1 mouse_genomes_project 3 91617974 91627937 + MGP_LPJ_P0061877 Crtc2 protein_coding protein_coding MGP_LPJ_T0061878.1 MGP_LPJ_G0027395.1 mouse_genomes_project 3 91618107 91627932 + Crtc2 protein_coding retained_intron MGP_LPJ_T0061879.1 MGP_LPJ_G0027395.1 mouse_genomes_project 3 91618107 91627932 + Crtc2 protein_coding retained_intron MGP_LPJ_T0061880.1 MGP_LPJ_G0027395.1 mouse_genomes_project 3 91618135 91622445 + Crtc2 protein_coding retained_intron MGP_LPJ_T0061881.1 MGP_LPJ_G0027395.1 mouse_genomes_project 3 91618152 91627932 + Crtc2 protein_coding processed_transcript MGP_LPJ_T0061882.1 MGP_LPJ_G0027395.1 mouse_genomes_project 3 91621106 91627932 + MGP_LPJ_P0061882 Crtc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0061883.1 MGP_LPJ_G0027395.1 mouse_genomes_project 3 91621862 91623304 + Crtc2 protein_coding retained_intron MGP_LPJ_T0061884.1 MGP_LPJ_G0027395.1 mouse_genomes_project 3 91622776 91624133 + Crtc2 protein_coding retained_intron MGP_LPJ_T0014219.1 MGP_LPJ_G0012310.1 mouse_genomes_project 3 116970468 116971075 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010577.1 MGP_LPJ_G0008695.1 mouse_genomes_project 3 138539215 138539294 - Mir1895 miRNA miRNA MGP_LPJ_T0063189.1 MGP_LPJ_G0027728.1 mouse_genomes_project 3 117371280 117569597 + MGP_LPJ_P0063189 Col11a1 protein_coding protein_coding MGP_LPJ_T0063190.1 MGP_LPJ_G0027728.1 mouse_genomes_project 3 117371280 117449984 + MGP_LPJ_P0063190 Col11a1 protein_coding protein_coding MGP_LPJ_T0063191.1 MGP_LPJ_G0027728.1 mouse_genomes_project 3 117371374 117373885 + Col11a1 protein_coding retained_intron MGP_LPJ_T0063192.1 MGP_LPJ_G0027728.1 mouse_genomes_project 3 117371639 117508568 + MGP_LPJ_P0063192 Col11a1 protein_coding unknown_likely_coding MGP_LPJ_T0063193.1 MGP_LPJ_G0027728.1 mouse_genomes_project 3 117371639 117567706 + MGP_LPJ_P0063193 Col11a1 protein_coding unknown_likely_coding MGP_LPJ_T0063194.1 MGP_LPJ_G0027728.1 mouse_genomes_project 3 117400498 117401466 + Col11a1 protein_coding retained_intron MGP_LPJ_T0063195.1 MGP_LPJ_G0027728.1 mouse_genomes_project 3 117490189 117497034 + Col11a1 protein_coding retained_intron MGP_LPJ_T0063196.1 MGP_LPJ_G0027728.1 mouse_genomes_project 3 117508340 117568196 + MGP_LPJ_P0063196 Col11a1 protein_coding nonsense_mediated_decay MGP_LPJ_T0061203.1 MGP_LPJ_G0027274.1 mouse_genomes_project 3 84756769 84911496 - MGP_LPJ_P0061203 D930015E06Rik protein_coding protein_coding MGP_LPJ_T0061204.1 MGP_LPJ_G0027274.1 mouse_genomes_project 3 84757323 84911458 - MGP_LPJ_P0061204 D930015E06Rik protein_coding protein_coding MGP_LPJ_T0061205.1 MGP_LPJ_G0027274.1 mouse_genomes_project 3 84757323 84911496 - MGP_LPJ_P0061205 D930015E06Rik protein_coding protein_coding MGP_LPJ_T0061206.1 MGP_LPJ_G0027274.1 mouse_genomes_project 3 84757324 84768362 - D930015E06Rik protein_coding processed_transcript MGP_LPJ_T0061207.1 MGP_LPJ_G0027274.1 mouse_genomes_project 3 84759477 84766727 - D930015E06Rik protein_coding retained_intron MGP_LPJ_T0061208.1 MGP_LPJ_G0027274.1 mouse_genomes_project 3 84759491 84768688 - D930015E06Rik protein_coding retained_intron MGP_LPJ_T0061209.1 MGP_LPJ_G0027274.1 mouse_genomes_project 3 84781978 84828832 - D930015E06Rik protein_coding processed_transcript MGP_LPJ_T0061210.1 MGP_LPJ_G0027274.1 mouse_genomes_project 3 84800954 84804252 - D930015E06Rik protein_coding processed_transcript MGP_LPJ_T0061211.1 MGP_LPJ_G0027274.1 mouse_genomes_project 3 84901642 84911449 - D930015E06Rik protein_coding retained_intron MGP_LPJ_T0061212.1 MGP_LPJ_G0027274.1 mouse_genomes_project 3 84908499 84911482 - D930015E06Rik protein_coding retained_intron MGP_LPJ_T0061213.1 MGP_LPJ_G0027274.1 mouse_genomes_project 3 84908697 84911455 - D930015E06Rik protein_coding retained_intron MGP_LPJ_T0001336.1 MGP_LPJ_G0001256.1 mouse_genomes_project 3 125493879 125496578 - TEC TEC MGP_LPJ_T0100707.1 MGP_LPJ_G0038970.1 mouse_genomes_project 3 119917486 119917583 + Gm26358 snoRNA snoRNA MGP_LPJ_T0014109.1 MGP_LPJ_G0012200.1 mouse_genomes_project 3 86874644 86874932 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014139.1 MGP_LPJ_G0012230.1 mouse_genomes_project 3 95162588 95163371 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060107.1 MGP_LPJ_G0027051.1 mouse_genomes_project 3 25987004 25995558 + Pld1 protein_coding processed_transcript MGP_LPJ_T0060108.1 MGP_LPJ_G0027051.1 mouse_genomes_project 3 25987005 26070361 + MGP_LPJ_P0060108 Pld1 protein_coding protein_coding MGP_LPJ_T0060109.1 MGP_LPJ_G0027051.1 mouse_genomes_project 3 26025396 26170684 + MGP_LPJ_P0060109 Pld1 protein_coding protein_coding MGP_LPJ_T0060110.1 MGP_LPJ_G0027051.1 mouse_genomes_project 3 26061188 26170372 + MGP_LPJ_P0060110 Pld1 protein_coding protein_coding MGP_LPJ_T0060111.1 MGP_LPJ_G0027051.1 mouse_genomes_project 3 26072935 26171996 + MGP_LPJ_P0060111 Pld1 protein_coding protein_coding MGP_LPJ_T0060112.1 MGP_LPJ_G0027051.1 mouse_genomes_project 3 26082863 26091365 + Pld1 protein_coding processed_transcript MGP_LPJ_T0060113.1 MGP_LPJ_G0027051.1 mouse_genomes_project 3 26107764 26122462 + Pld1 protein_coding retained_intron MGP_LPJ_T0060114.1 MGP_LPJ_G0027051.1 mouse_genomes_project 3 26114953 26118270 + Pld1 protein_coding retained_intron MGP_LPJ_T0060115.1 MGP_LPJ_G0027051.1 mouse_genomes_project 3 26147556 26169429 + MGP_LPJ_P0060115 Pld1 protein_coding protein_coding MGP_LPJ_T0014159.1 MGP_LPJ_G0012250.1 mouse_genomes_project 3 100511369 100511857 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004399.1 MGP_LPJ_G0003844.1 mouse_genomes_project 3 138112021 138393165 - antisense antisense MGP_LPJ_T0004400.1 MGP_LPJ_G0003844.1 mouse_genomes_project 3 138244385 138539205 - antisense antisense MGP_LPJ_T0004401.1 MGP_LPJ_G0003844.1 mouse_genomes_project 3 138448482 138539352 - antisense antisense MGP_LPJ_T0007650.1 MGP_LPJ_G0006258.1 mouse_genomes_project 3 101356656 101360264 - 5730437C11Rik lincRNA lincRNA MGP_LPJ_T0099438.1 MGP_LPJ_G0037701.1 mouse_genomes_project 3 119899256 119899432 - Gm22361 snRNA snRNA MGP_LPJ_T0004390.1 MGP_LPJ_G0003836.1 mouse_genomes_project 3 131900519 131905088 + antisense antisense MGP_LPJ_T0101328.1 MGP_LPJ_G0039539.1 mouse_genomes_project 3 96303441 96304216 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101329.1 MGP_LPJ_G0039539.1 mouse_genomes_project 3 96303632 96304050 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0013985.1 MGP_LPJ_G0012076.1 mouse_genomes_project 3 46246582 46247048 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004307.1 MGP_LPJ_G0003784.1 mouse_genomes_project 3 96246885 96258885 - Gm43306 antisense antisense MGP_LPJ_T0100664.1 MGP_LPJ_G0038927.1 mouse_genomes_project 3 40187347 40187472 - Gm25487 snoRNA snoRNA MGP_LPJ_T0001186.1 MGP_LPJ_G0001108.1 mouse_genomes_project 3 36130699 36136919 + TEC TEC MGP_LPJ_T0014206.1 MGP_LPJ_G0012297.1 mouse_genomes_project 3 113347292 113347629 - processed_pseudogene processed_pseudogene MGP_LPJ_T0063029.1 MGP_LPJ_G0027692.1 mouse_genomes_project 3 111058950 111099313 - MGP_LPJ_P0063029 Gnai3 protein_coding protein_coding MGP_LPJ_T0061845.1 MGP_LPJ_G0027389.1 mouse_genomes_project 3 91410835 91441914 + MGP_LPJ_P0061845 Tpm3 protein_coding protein_coding MGP_LPJ_T0061846.1 MGP_LPJ_G0027389.1 mouse_genomes_project 3 91410837 91450934 + MGP_LPJ_P0061846 Tpm3 protein_coding protein_coding MGP_LPJ_T0061847.1 MGP_LPJ_G0027389.1 mouse_genomes_project 3 91425891 91450934 + MGP_LPJ_P0061847 Tpm3 protein_coding protein_coding MGP_LPJ_T0061848.1 MGP_LPJ_G0027389.1 mouse_genomes_project 3 91426005 91450934 + MGP_LPJ_P0061848 Tpm3 protein_coding protein_coding MGP_LPJ_T0061849.1 MGP_LPJ_G0027389.1 mouse_genomes_project 3 91426016 91439380 + Tpm3 protein_coding retained_intron MGP_LPJ_T0061850.1 MGP_LPJ_G0027389.1 mouse_genomes_project 3 91426016 91434021 + Tpm3 protein_coding retained_intron MGP_LPJ_T0061851.1 MGP_LPJ_G0027389.1 mouse_genomes_project 3 91426066 91448567 + MGP_LPJ_P0061851 Tpm3 protein_coding protein_coding MGP_LPJ_T0061852.1 MGP_LPJ_G0027389.1 mouse_genomes_project 3 91426083 91440879 + MGP_LPJ_P0061852 Tpm3 protein_coding protein_coding MGP_LPJ_T0061853.1 MGP_LPJ_G0027389.1 mouse_genomes_project 3 91432514 91433691 + Tpm3 protein_coding retained_intron MGP_LPJ_T0061854.1 MGP_LPJ_G0027389.1 mouse_genomes_project 3 91433452 91439591 + Tpm3 protein_coding retained_intron MGP_LPJ_T0061855.1 MGP_LPJ_G0027389.1 mouse_genomes_project 3 91433582 91434059 + Tpm3 protein_coding retained_intron MGP_LPJ_T0061856.1 MGP_LPJ_G0027389.1 mouse_genomes_project 3 91433599 91438353 + Tpm3 protein_coding retained_intron MGP_LPJ_T0061857.1 MGP_LPJ_G0027389.1 mouse_genomes_project 3 91434204 91439826 + Tpm3 protein_coding retained_intron MGP_LPJ_T0061858.1 MGP_LPJ_G0027389.1 mouse_genomes_project 3 91439414 91440256 + Tpm3 protein_coding retained_intron MGP_LPJ_T0061859.1 MGP_LPJ_G0027389.1 mouse_genomes_project 3 91439842 91448567 + Tpm3 protein_coding processed_transcript MGP_LPJ_T0014261.1 MGP_LPJ_G0012352.1 mouse_genomes_project 3 133088541 133089861 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014026.1 MGP_LPJ_G0012117.1 mouse_genomes_project 3 59396998 59397112 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013988.1 MGP_LPJ_G0012079.1 mouse_genomes_project 3 48400313 48400668 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100723.1 MGP_LPJ_G0038986.1 mouse_genomes_project 3 159153577 159153702 + Gm24395 snoRNA snoRNA MGP_LPJ_T0014228.1 MGP_LPJ_G0012319.1 mouse_genomes_project 3 120301238 120301623 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100672.1 MGP_LPJ_G0038935.1 mouse_genomes_project 3 56570036 56570166 + Gm22269 snoRNA snoRNA MGP_LPJ_T0004398.1 MGP_LPJ_G0003843.1 mouse_genomes_project 3 137828020 137874475 + Gm42567 antisense antisense MGP_LPJ_T0063860.1 MGP_LPJ_G0027852.1 mouse_genomes_project 3 142654963 142670593 + MGP_LPJ_P0063860 Adh7 protein_coding protein_coding MGP_LPJ_T0063861.1 MGP_LPJ_G0027852.1 mouse_genomes_project 3 142658651 142660268 + Adh7 protein_coding retained_intron MGP_LPJ_T0063862.1 MGP_LPJ_G0027852.1 mouse_genomes_project 3 142665229 142668620 + Adh7 protein_coding processed_transcript MGP_LPJ_T0007779.1 MGP_LPJ_G0006365.1 mouse_genomes_project 3 154287471 154459154 - Gm30382 lincRNA lincRNA MGP_LPJ_T0007780.1 MGP_LPJ_G0006365.1 mouse_genomes_project 3 154287929 154329606 - Gm30382 lincRNA lincRNA MGP_LPJ_T0007782.1 MGP_LPJ_G0006365.1 mouse_genomes_project 3 154318450 154459179 - Gm30382 lincRNA lincRNA MGP_LPJ_T0004222.1 MGP_LPJ_G0003722.1 mouse_genomes_project 3 24308720 24309949 + A830092H15Rik antisense antisense MGP_LPJ_T0004223.1 MGP_LPJ_G0003722.1 mouse_genomes_project 3 24309521 24310945 + A830092H15Rik antisense antisense MGP_LPJ_T0063946.1 MGP_LPJ_G0027869.1 mouse_genomes_project 3 147218770 147255740 + MGP_LPJ_P0063946 Gbp2b protein_coding protein_coding MGP_LPJ_T0063947.1 MGP_LPJ_G0027869.1 mouse_genomes_project 3 147222066 147254766 + MGP_LPJ_P0063947 Gbp2b protein_coding unknown_likely_coding MGP_LPJ_T0001324.1 MGP_LPJ_G0001244.1 mouse_genomes_project 3 120414645 120418619 - TEC TEC MGP_LPJ_T0013990.1 MGP_LPJ_G0012081.1 mouse_genomes_project 3 48822367 48822683 + processed_pseudogene processed_pseudogene MGP_LPJ_T0063291.1 MGP_LPJ_G0027749.1 mouse_genomes_project 3 120818069 120866825 - MGP_LPJ_P0063291 Plppr4 protein_coding protein_coding MGP_LPJ_T0063292.1 MGP_LPJ_G0027749.1 mouse_genomes_project 3 120821403 120866825 - Plppr4 protein_coding retained_intron MGP_LPJ_T0063293.1 MGP_LPJ_G0027749.1 mouse_genomes_project 3 120822197 120866197 - MGP_LPJ_P0063293 Plppr4 protein_coding protein_coding MGP_LPJ_T0060774.1 MGP_LPJ_G0027166.1 mouse_genomes_project 3 56947948 56965158 + MGP_LPJ_P0060774 Tm4sf4 protein_coding protein_coding MGP_LPJ_T0064393.1 MGP_LPJ_G0027945.1 mouse_genomes_project 3 165116333 165144016 + MGP_LPJ_P0064393 Rpe65 protein_coding protein_coding MGP_LPJ_T0064394.1 MGP_LPJ_G0027945.1 mouse_genomes_project 3 165116376 165123572 + MGP_LPJ_P0064394 Rpe65 protein_coding nonsense_mediated_decay MGP_LPJ_T0064395.1 MGP_LPJ_G0027945.1 mouse_genomes_project 3 165116391 165143492 + MGP_LPJ_P0064395 Rpe65 protein_coding protein_coding MGP_LPJ_T0001299.1 MGP_LPJ_G0001219.1 mouse_genomes_project 3 98384001 98385615 + TEC TEC MGP_LPJ_T0099377.1 MGP_LPJ_G0037640.1 mouse_genomes_project 3 15974830 15974994 - Gm23686 snRNA snRNA MGP_LPJ_T0001206.1 MGP_LPJ_G0001128.1 mouse_genomes_project 3 46282682 46285405 - TEC TEC MGP_LPJ_T0013857.1 MGP_LPJ_G0011948.1 mouse_genomes_project 3 3458830 3461760 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014292.1 MGP_LPJ_G0012383.1 mouse_genomes_project 3 139856597 139857156 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060579.1 MGP_LPJ_G0027129.1 mouse_genomes_project 3 48970391 48984408 - MGP_LPJ_P0060579 Pcdh18 protein_coding protein_coding MGP_LPJ_T0060580.1 MGP_LPJ_G0027129.1 mouse_genomes_project 3 48970393 48984377 - MGP_LPJ_P0060580 Pcdh18 protein_coding protein_coding MGP_LPJ_T0060581.1 MGP_LPJ_G0027129.1 mouse_genomes_project 3 48972366 48984417 - Pcdh18 protein_coding processed_transcript MGP_LPJ_T0060582.1 MGP_LPJ_G0027129.1 mouse_genomes_project 3 48979512 48982556 - MGP_LPJ_P0060582 Pcdh18 protein_coding protein_coding MGP_LPJ_T0060583.1 MGP_LPJ_G0027129.1 mouse_genomes_project 3 48981917 48984375 - Pcdh18 protein_coding processed_transcript MGP_LPJ_T0060850.1 MGP_LPJ_G0027187.1 mouse_genomes_project 3 59537198 59555526 + protein_coding unprocessed_pseudogene MGP_LPJ_T0004312.1 MGP_LPJ_G0003788.1 mouse_genomes_project 3 96968768 96974512 - Gm15265 antisense antisense MGP_LPJ_T0004313.1 MGP_LPJ_G0003788.1 mouse_genomes_project 3 96968802 96974935 - Gm15265 antisense antisense MGP_LPJ_T0011544.1 MGP_LPJ_G0009662.1 mouse_genomes_project 3 11506647 11506942 + Gm25981 misc_RNA misc_RNA MGP_LPJ_T0014084.1 MGP_LPJ_G0012175.1 mouse_genomes_project 3 75288452 75289076 + processed_pseudogene processed_pseudogene MGP_LPJ_T0063456.1 MGP_LPJ_G0027780.1 mouse_genomes_project 3 128286642 128311774 - MGP_LPJ_P0063456 protein_coding protein_coding MGP_LPJ_T0063457.1 MGP_LPJ_G0027780.1 mouse_genomes_project 3 128286877 128311725 - MGP_LPJ_P0063457 protein_coding nonsense_mediated_decay MGP_LPJ_T0014302.1 MGP_LPJ_G0012393.1 mouse_genomes_project 3 142960234 142960603 - processed_pseudogene processed_pseudogene MGP_LPJ_T0063703.1 MGP_LPJ_G0027823.1 mouse_genomes_project 3 137370800 137504114 - MGP_LPJ_P0063703 protein_coding protein_coding MGP_LPJ_T0063704.1 MGP_LPJ_G0027823.1 mouse_genomes_project 3 137378191 137395929 - MGP_LPJ_P0063704 protein_coding protein_coding MGP_LPJ_T0063705.1 MGP_LPJ_G0027823.1 mouse_genomes_project 3 137423176 137504114 - MGP_LPJ_P0063705 protein_coding protein_coding MGP_LPJ_T0063706.1 MGP_LPJ_G0027823.1 mouse_genomes_project 3 137435904 137504174 - MGP_LPJ_P0063706 protein_coding protein_coding MGP_LPJ_T0102120.1 MGP_LPJ_G0040157.1 mouse_genomes_project 3 109398381 109398796 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0061613.1 MGP_LPJ_G0027353.1 mouse_genomes_project 3 90417517 90436618 - MGP_LPJ_P0061613 Hcn3 protein_coding protein_coding MGP_LPJ_T0061614.1 MGP_LPJ_G0027353.1 mouse_genomes_project 3 90421989 90424490 - Hcn3 protein_coding retained_intron MGP_LPJ_T0061615.1 MGP_LPJ_G0027353.1 mouse_genomes_project 3 90422106 90424472 - Hcn3 protein_coding retained_intron MGP_LPJ_T0061616.1 MGP_LPJ_G0027353.1 mouse_genomes_project 3 90424738 90436402 - Hcn3 protein_coding processed_transcript MGP_LPJ_T0010526.1 MGP_LPJ_G0008644.1 mouse_genomes_project 3 33099778 33099857 + Mir1897 miRNA miRNA MGP_LPJ_T0100665.1 MGP_LPJ_G0038928.1 mouse_genomes_project 3 45245911 45246043 + Gm26081 snoRNA snoRNA MGP_LPJ_T0098561.1 MGP_LPJ_G0036835.1 mouse_genomes_project 3 106226257 106227517 + Gm43066 sense_intronic sense_intronic MGP_LPJ_T0001416.1 MGP_LPJ_G0001335.1 mouse_genomes_project 3 159458244 159460477 + TEC TEC MGP_LPJ_T0062018.1 MGP_LPJ_G0027457.1 mouse_genomes_project 3 94618186 94619305 + MGP_LPJ_P0062018 Lce3b protein_coding protein_coding MGP_LPJ_T0001294.1 MGP_LPJ_G0001214.1 mouse_genomes_project 3 95036303 95038834 + TEC TEC MGP_LPJ_T0014215.1 MGP_LPJ_G0012306.1 mouse_genomes_project 3 115844705 115845098 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062741.1 MGP_LPJ_G0027623.1 mouse_genomes_project 3 106367876 106419777 - MGP_LPJ_P0062741 Hipk1 protein_coding protein_coding MGP_LPJ_T0062742.1 MGP_LPJ_G0027623.1 mouse_genomes_project 3 106371623 106419295 - MGP_LPJ_P0062742 Hipk1 protein_coding protein_coding MGP_LPJ_T0062743.1 MGP_LPJ_G0027623.1 mouse_genomes_project 3 106371721 106419470 - MGP_LPJ_P0062743 Hipk1 protein_coding protein_coding MGP_LPJ_T0062744.1 MGP_LPJ_G0027623.1 mouse_genomes_project 3 106373217 106419775 - MGP_LPJ_P0062744 Hipk1 protein_coding nonsense_mediated_decay MGP_LPJ_T0062745.1 MGP_LPJ_G0027623.1 mouse_genomes_project 3 106376175 106379113 - Hipk1 protein_coding retained_intron MGP_LPJ_T0062746.1 MGP_LPJ_G0027623.1 mouse_genomes_project 3 106377424 106379062 - Hipk1 protein_coding retained_intron MGP_LPJ_T0062747.1 MGP_LPJ_G0027623.1 mouse_genomes_project 3 106382206 106419489 - Hipk1 protein_coding retained_intron MGP_LPJ_T0004337.1 MGP_LPJ_G0003804.1 mouse_genomes_project 3 103951106 103952145 - Gm42538 antisense antisense MGP_LPJ_T0004338.1 MGP_LPJ_G0003804.1 mouse_genomes_project 3 103951765 103953428 - Gm42538 antisense antisense MGP_LPJ_T0060883.1 MGP_LPJ_G0027195.1 mouse_genomes_project 3 62169172 62302888 + MGP_LPJ_P0060883 Arhgef26 protein_coding protein_coding MGP_LPJ_T0060884.1 MGP_LPJ_G0027195.1 mouse_genomes_project 3 62169827 62201101 + Arhgef26 protein_coding processed_transcript MGP_LPJ_T0060885.1 MGP_LPJ_G0027195.1 mouse_genomes_project 3 62171218 62199491 + Arhgef26 protein_coding retained_intron MGP_LPJ_T0060886.1 MGP_LPJ_G0027195.1 mouse_genomes_project 3 62171929 62202373 + Arhgef26 protein_coding processed_transcript MGP_LPJ_T0060887.1 MGP_LPJ_G0027195.1 mouse_genomes_project 3 62243470 62300879 + MGP_LPJ_P0060887 Arhgef26 protein_coding protein_coding MGP_LPJ_T0060888.1 MGP_LPJ_G0027195.1 mouse_genomes_project 3 62264107 62266939 + Arhgef26 protein_coding retained_intron MGP_LPJ_T0010564.1 MGP_LPJ_G0008682.1 mouse_genomes_project 3 119390462 119390516 + Mir669n miRNA miRNA MGP_LPJ_T0061944.1 MGP_LPJ_G0027407.1 mouse_genomes_project 3 91923325 91929220 + MGP_LPJ_P0061944 S100a16 protein_coding protein_coding MGP_LPJ_T0061945.1 MGP_LPJ_G0027407.1 mouse_genomes_project 3 91923386 91929086 + MGP_LPJ_P0061945 S100a16 protein_coding protein_coding MGP_LPJ_T0061946.1 MGP_LPJ_G0027407.1 mouse_genomes_project 3 91923396 91928807 + S100a16 protein_coding processed_transcript MGP_LPJ_T0061947.1 MGP_LPJ_G0027407.1 mouse_genomes_project 3 91924956 91928999 + MGP_LPJ_P0061947 S100a16 protein_coding protein_coding MGP_LPJ_T0061948.1 MGP_LPJ_G0027407.1 mouse_genomes_project 3 91925359 91928501 + MGP_LPJ_P0061948 S100a16 protein_coding protein_coding MGP_LPJ_T0061949.1 MGP_LPJ_G0027407.1 mouse_genomes_project 3 91927217 91928820 + MGP_LPJ_P0061949 S100a16 protein_coding protein_coding MGP_LPJ_T0061950.1 MGP_LPJ_G0027407.1 mouse_genomes_project 3 91927220 91928934 + MGP_LPJ_P0061950 S100a16 protein_coding protein_coding MGP_LPJ_T0061951.1 MGP_LPJ_G0027407.1 mouse_genomes_project 3 91927232 91929223 + MGP_LPJ_P0061951 S100a16 protein_coding protein_coding MGP_LPJ_T0063272.1 MGP_LPJ_G0027745.1 mouse_genomes_project 3 120195044 120270865 - MGP_LPJ_P0063272 Agl protein_coding protein_coding MGP_LPJ_T0063273.1 MGP_LPJ_G0027745.1 mouse_genomes_project 3 120197545 120270117 - MGP_LPJ_P0063273 Agl protein_coding protein_coding MGP_LPJ_T0063274.1 MGP_LPJ_G0027745.1 mouse_genomes_project 3 120198089 120241913 - MGP_LPJ_P0063274 Agl protein_coding protein_coding MGP_LPJ_T0063275.1 MGP_LPJ_G0027745.1 mouse_genomes_project 3 120203106 120270741 - MGP_LPJ_P0063275 Agl protein_coding nonsense_mediated_decay MGP_LPJ_T0063276.1 MGP_LPJ_G0027745.1 mouse_genomes_project 3 120209330 120270828 - MGP_LPJ_P0063276 Agl protein_coding protein_coding MGP_LPJ_T0063277.1 MGP_LPJ_G0027745.1 mouse_genomes_project 3 120240675 120242413 - MGP_LPJ_P0063277 Agl protein_coding protein_coding MGP_LPJ_T0063278.1 MGP_LPJ_G0027745.1 mouse_genomes_project 3 120251671 120270730 - Agl protein_coding retained_intron MGP_LPJ_T0063279.1 MGP_LPJ_G0027745.1 mouse_genomes_project 3 120253007 120270550 - MGP_LPJ_P0063279 Agl protein_coding protein_coding MGP_LPJ_T0060307.1 MGP_LPJ_G0027085.1 mouse_genomes_project 3 32230387 32266379 - MGP_LPJ_P0060307 Ccdc39 protein_coding protein_coding MGP_LPJ_T0060308.1 MGP_LPJ_G0027085.1 mouse_genomes_project 3 32231079 32232577 - Ccdc39 protein_coding retained_intron MGP_LPJ_T0060309.1 MGP_LPJ_G0027085.1 mouse_genomes_project 3 32236673 32266379 - Ccdc39 protein_coding retained_intron MGP_LPJ_T0060310.1 MGP_LPJ_G0027085.1 mouse_genomes_project 3 32238212 32266143 - Ccdc39 protein_coding retained_intron MGP_LPJ_T0060311.1 MGP_LPJ_G0027085.1 mouse_genomes_project 3 32245563 32247518 - Ccdc39 protein_coding retained_intron MGP_LPJ_T0060312.1 MGP_LPJ_G0027085.1 mouse_genomes_project 3 32258957 32266388 - Ccdc39 protein_coding retained_intron MGP_LPJ_T0013901.1 MGP_LPJ_G0011992.1 mouse_genomes_project 3 13738056 13739117 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004217.1 MGP_LPJ_G0003718.1 mouse_genomes_project 3 2467429 2512692 - 2700069I18Rik antisense antisense MGP_LPJ_T0004218.1 MGP_LPJ_G0003718.1 mouse_genomes_project 3 2468823 2512710 - 2700069I18Rik antisense antisense MGP_LPJ_T0061286.1 MGP_LPJ_G0027292.1 mouse_genomes_project 3 87790798 87933897 - MGP_LPJ_P0061286 Dclk2 protein_coding protein_coding MGP_LPJ_T0061287.1 MGP_LPJ_G0027292.1 mouse_genomes_project 3 87790800 87934370 - MGP_LPJ_P0061287 Dclk2 protein_coding protein_coding MGP_LPJ_T0061288.1 MGP_LPJ_G0027292.1 mouse_genomes_project 3 87790800 87933706 - MGP_LPJ_P0061288 Dclk2 protein_coding nonsense_mediated_decay MGP_LPJ_T0061289.1 MGP_LPJ_G0027292.1 mouse_genomes_project 3 87790806 87933853 - MGP_LPJ_P0061289 Dclk2 protein_coding protein_coding MGP_LPJ_T0061290.1 MGP_LPJ_G0027292.1 mouse_genomes_project 3 87791859 87933688 - MGP_LPJ_P0061290 Dclk2 protein_coding protein_coding MGP_LPJ_T0061291.1 MGP_LPJ_G0027292.1 mouse_genomes_project 3 87791888 87796963 - Dclk2 protein_coding processed_transcript MGP_LPJ_T0061292.1 MGP_LPJ_G0027292.1 mouse_genomes_project 3 87791996 87803808 - Dclk2 protein_coding processed_transcript MGP_LPJ_T0061293.1 MGP_LPJ_G0027292.1 mouse_genomes_project 3 87793993 87802660 - Dclk2 protein_coding processed_transcript MGP_LPJ_T0061294.1 MGP_LPJ_G0027292.1 mouse_genomes_project 3 87803568 87933892 - MGP_LPJ_P0061294 Dclk2 protein_coding protein_coding MGP_LPJ_T0013847.1 MGP_LPJ_G0011938.1 mouse_genomes_project 3 876277 876593 + processed_pseudogene processed_pseudogene MGP_LPJ_T0060013.1 MGP_LPJ_G0027033.1 mouse_genomes_project 3 17547193 17549189 - MGP_LPJ_P0060013 Crh protein_coding protein_coding MGP_LPJ_T0063934.1 MGP_LPJ_G0027866.1 mouse_genomes_project 3 147101145 147137895 + MGP_LPJ_P0063934 Gbp5 protein_coding protein_coding MGP_LPJ_T0063935.1 MGP_LPJ_G0027866.1 mouse_genomes_project 3 147116352 147133445 + Gbp5 protein_coding processed_transcript MGP_LPJ_T0063936.1 MGP_LPJ_G0027866.1 mouse_genomes_project 3 147125149 147129690 + Gbp5 protein_coding retained_intron MGP_LPJ_T0102093.1 MGP_LPJ_G0040130.1 mouse_genomes_project 3 79708548 79709071 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0062551.1 MGP_LPJ_G0027579.1 mouse_genomes_project 3 100667288 101154682 + Zfp697 protein_coding processed_transcript MGP_LPJ_T0062552.1 MGP_LPJ_G0027579.1 mouse_genomes_project 3 100667308 100700826 + MGP_LPJ_P0062552 Zfp697 protein_coding protein_coding MGP_LPJ_T0062553.1 MGP_LPJ_G0027579.1 mouse_genomes_project 3 100667375 100700833 + MGP_LPJ_P0062553 Zfp697 protein_coding protein_coding MGP_LPJ_T0010548.1 MGP_LPJ_G0008666.1 mouse_genomes_project 3 89714738 89714820 - Mir1905 miRNA miRNA MGP_LPJ_T0014212.1 MGP_LPJ_G0012303.1 mouse_genomes_project 3 115412094 115412394 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007702.1 MGP_LPJ_G0006299.1 mouse_genomes_project 3 126413720 126421631 - Gm43568 lincRNA lincRNA MGP_LPJ_T0007703.1 MGP_LPJ_G0006299.1 mouse_genomes_project 3 126418680 126421126 - Gm43568 lincRNA lincRNA MGP_LPJ_T0007704.1 MGP_LPJ_G0006299.1 mouse_genomes_project 3 126420102 126421348 - Gm43568 lincRNA lincRNA MGP_LPJ_T0011552.1 MGP_LPJ_G0009670.1 mouse_genomes_project 3 42731148 42731444 + Gm25714 misc_RNA misc_RNA MGP_LPJ_T0062544.1 MGP_LPJ_G0027576.1 mouse_genomes_project 3 100484642 100499274 + MGP_LPJ_P0062544 Reg4 protein_coding protein_coding MGP_LPJ_T0063661.1 MGP_LPJ_G0027813.1 mouse_genomes_project 3 135562676 135577275 - MGP_LPJ_P0063661 Cyp2u1 protein_coding protein_coding MGP_LPJ_T0063662.1 MGP_LPJ_G0027813.1 mouse_genomes_project 3 135567338 135577251 - MGP_LPJ_P0063662 Cyp2u1 protein_coding protein_coding MGP_LPJ_T0063663.1 MGP_LPJ_G0027813.1 mouse_genomes_project 3 135568474 135577278 - Cyp2u1 protein_coding processed_transcript MGP_LPJ_T0010568.1 MGP_LPJ_G0008686.1 mouse_genomes_project 3 126067229 126067348 - Mir760 miRNA miRNA MGP_LPJ_T0098582.1 MGP_LPJ_G0036856.1 mouse_genomes_project 3 107551113 107552913 - Gm42659 sense_intronic sense_intronic MGP_LPJ_T0060810.1 MGP_LPJ_G0027175.1 mouse_genomes_project 3 58174432 58190934 + MGP_LPJ_P0060810 Selt protein_coding protein_coding MGP_LPJ_T0060811.1 MGP_LPJ_G0027175.1 mouse_genomes_project 3 58174452 58189561 + MGP_LPJ_P0060811 Selt protein_coding unknown_likely_coding MGP_LPJ_T0060812.1 MGP_LPJ_G0027175.1 mouse_genomes_project 3 58174494 58186487 + Selt protein_coding retained_intron MGP_LPJ_T0004438.1 MGP_LPJ_G0003870.1 mouse_genomes_project 3 163556141 163565142 - B230334C09Rik antisense antisense MGP_LPJ_T0004295.1 MGP_LPJ_G0003775.1 mouse_genomes_project 3 90085521 90157642 - antisense antisense MGP_LPJ_T0001261.1 MGP_LPJ_G0001181.1 mouse_genomes_project 3 59326523 59329974 + TEC TEC MGP_LPJ_T0011548.1 MGP_LPJ_G0009666.1 mouse_genomes_project 3 28771014 28771426 - 1600017P15Rik misc_RNA misc_RNA MGP_LPJ_T0001260.1 MGP_LPJ_G0001180.1 mouse_genomes_project 3 58905908 58907443 + TEC TEC MGP_LPJ_T0098559.1 MGP_LPJ_G0036833.1 mouse_genomes_project 3 105670753 105673032 + sense_intronic sense_intronic MGP_LPJ_T0062545.1 MGP_LPJ_G0027577.1 mouse_genomes_project 3 100544947 100571325 + MGP_LPJ_P0062545 Hmgcs2 protein_coding protein_coding MGP_LPJ_T0062546.1 MGP_LPJ_G0027577.1 mouse_genomes_project 3 100544947 100571331 + MGP_LPJ_P0062546 Hmgcs2 protein_coding protein_coding MGP_LPJ_T0062362.1 MGP_LPJ_G0027528.1 mouse_genomes_project 3 97989863 97997133 + MGP_LPJ_P0062362 Aph1a protein_coding protein_coding MGP_LPJ_T0062363.1 MGP_LPJ_G0027528.1 mouse_genomes_project 3 97989927 97990886 + MGP_LPJ_P0062363 Aph1a protein_coding protein_coding MGP_LPJ_T0061502.1 MGP_LPJ_G0027337.1 mouse_genomes_project 3 89729263 89730539 - Lamtor2 protein_coding retained_intron MGP_LPJ_T0061503.1 MGP_LPJ_G0027337.1 mouse_genomes_project 3 89729263 89732469 - MGP_LPJ_P0061503 Lamtor2 protein_coding protein_coding MGP_LPJ_T0061504.1 MGP_LPJ_G0027337.1 mouse_genomes_project 3 89729264 89732304 - MGP_LPJ_P0061504 Lamtor2 protein_coding protein_coding MGP_LPJ_T0061505.1 MGP_LPJ_G0027337.1 mouse_genomes_project 3 89729265 89732338 - Lamtor2 protein_coding processed_transcript MGP_LPJ_T0061506.1 MGP_LPJ_G0027337.1 mouse_genomes_project 3 89731674 89732519 - Lamtor2 protein_coding retained_intron MGP_LPJ_T0100679.1 MGP_LPJ_G0038942.1 mouse_genomes_project 3 77659082 77659159 - Gm23644 snoRNA snoRNA MGP_LPJ_T0013972.1 MGP_LPJ_G0012063.1 mouse_genomes_project 3 41391066 41391553 - processed_pseudogene processed_pseudogene MGP_LPJ_T0061497.1 MGP_LPJ_G0027335.1 mouse_genomes_project 3 89710792 89719834 + MGP_LPJ_P0061497 Mex3a protein_coding protein_coding MGP_LPJ_T0007498.1 MGP_LPJ_G0006145.1 mouse_genomes_project 3 26891149 26893705 - Gm32950 lincRNA lincRNA MGP_LPJ_T0061146.1 MGP_LPJ_G0027256.1 mouse_genomes_project 3 81595224 81666618 - MGP_LPJ_P0061146 Glrb protein_coding protein_coding MGP_LPJ_T0061147.1 MGP_LPJ_G0027256.1 mouse_genomes_project 3 81595225 81666574 - MGP_LPJ_P0061147 Glrb protein_coding nonsense_mediated_decay MGP_LPJ_T0061148.1 MGP_LPJ_G0027256.1 mouse_genomes_project 3 81596586 81665064 - MGP_LPJ_P0061148 Glrb protein_coding protein_coding MGP_LPJ_T0061149.1 MGP_LPJ_G0027256.1 mouse_genomes_project 3 81607051 81666501 - MGP_LPJ_P0061149 Glrb protein_coding protein_coding MGP_LPJ_T0061150.1 MGP_LPJ_G0027256.1 mouse_genomes_project 3 81607058 81609918 - Glrb protein_coding retained_intron MGP_LPJ_T0061151.1 MGP_LPJ_G0027256.1 mouse_genomes_project 3 81614721 81666562 - MGP_LPJ_P0061151 Glrb protein_coding nonsense_mediated_decay MGP_LPJ_T0099395.1 MGP_LPJ_G0037658.1 mouse_genomes_project 3 58604907 58605079 - Gm25572 snRNA snRNA MGP_LPJ_T0014280.1 MGP_LPJ_G0012371.1 mouse_genomes_project 3 139265767 139267001 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013933.1 MGP_LPJ_G0012024.1 mouse_genomes_project 3 26300888 26301132 + processed_pseudogene processed_pseudogene MGP_LPJ_T0063837.1 MGP_LPJ_G0027845.1 mouse_genomes_project 3 142360384 142362427 + MGP_LPJ_P0063837 protein_coding protein_coding MGP_LPJ_T0014279.1 MGP_LPJ_G0012370.1 mouse_genomes_project 3 139263051 139263505 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062547.1 MGP_LPJ_G0027578.1 mouse_genomes_project 3 100573784 100620456 - MGP_LPJ_P0062547 protein_coding protein_coding MGP_LPJ_T0062548.1 MGP_LPJ_G0027578.1 mouse_genomes_project 3 100591162 100612056 - protein_coding retained_intron MGP_LPJ_T0062549.1 MGP_LPJ_G0027578.1 mouse_genomes_project 3 100591697 100598831 - protein_coding retained_intron MGP_LPJ_T0062550.1 MGP_LPJ_G0027578.1 mouse_genomes_project 3 100591804 100616002 - MGP_LPJ_P0062550 protein_coding protein_coding MGP_LPJ_T0007636.1 MGP_LPJ_G0006245.1 mouse_genomes_project 3 95036303 95206426 - lincRNA lincRNA MGP_LPJ_T0007677.1 MGP_LPJ_G0006280.1 mouse_genomes_project 3 111122166 111143007 + Gm12524 lincRNA lincRNA MGP_LPJ_T0007681.1 MGP_LPJ_G0006284.1 mouse_genomes_project 3 115046414 115277562 + lincRNA lincRNA MGP_LPJ_T0013846.1 MGP_LPJ_G0011937.1 mouse_genomes_project 3 876276 876675 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004330.1 MGP_LPJ_G0003799.1 mouse_genomes_project 3 99183016 99185066 - 9230114J08Rik antisense antisense MGP_LPJ_T0007542.1 MGP_LPJ_G0006179.1 mouse_genomes_project 3 40231565 40236024 - Platr4 lincRNA lincRNA MGP_LPJ_T0007543.1 MGP_LPJ_G0006179.1 mouse_genomes_project 3 40235226 40240730 - Platr4 lincRNA lincRNA MGP_LPJ_T0007544.1 MGP_LPJ_G0006179.1 mouse_genomes_project 3 40236351 40240732 - Platr4 lincRNA lincRNA MGP_LPJ_T0013992.1 MGP_LPJ_G0012083.1 mouse_genomes_project 3 48874322 48874743 + processed_pseudogene processed_pseudogene MGP_LPJ_T0061746.1 MGP_LPJ_G0027375.1 mouse_genomes_project 3 90712596 90721682 + MGP_LPJ_P0061746 protein_coding protein_coding MGP_LPJ_T0061747.1 MGP_LPJ_G0027375.1 mouse_genomes_project 3 90712616 90719380 + MGP_LPJ_P0061747 protein_coding protein_coding MGP_LPJ_T0061748.1 MGP_LPJ_G0027375.1 mouse_genomes_project 3 90712639 90721838 + MGP_LPJ_P0061748 protein_coding protein_coding MGP_LPJ_T0061749.1 MGP_LPJ_G0027375.1 mouse_genomes_project 3 90712735 90725238 + MGP_LPJ_P0061749 protein_coding unknown_likely_coding MGP_LPJ_T0061750.1 MGP_LPJ_G0027375.1 mouse_genomes_project 3 90715551 90719179 + protein_coding retained_intron MGP_LPJ_T0061751.1 MGP_LPJ_G0027375.1 mouse_genomes_project 3 90716560 90721838 + MGP_LPJ_P0061751 protein_coding protein_coding MGP_LPJ_T0061752.1 MGP_LPJ_G0027375.1 mouse_genomes_project 3 90719661 90722494 + protein_coding processed_transcript MGP_LPJ_T0014095.1 MGP_LPJ_G0012186.1 mouse_genomes_project 3 79399380 79400225 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001335.1 MGP_LPJ_G0001255.1 mouse_genomes_project 3 125486840 125490491 - TEC TEC MGP_LPJ_T0007579.1 MGP_LPJ_G0006205.1 mouse_genomes_project 3 63356302 63359071 - lincRNA lincRNA MGP_LPJ_T0060556.1 MGP_LPJ_G0027126.1 mouse_genomes_project 3 40514478 40529535 + MGP_LPJ_P0060556 D3Ertd751e protein_coding protein_coding MGP_LPJ_T0060557.1 MGP_LPJ_G0027126.1 mouse_genomes_project 3 40514529 40529733 + MGP_LPJ_P0060557 D3Ertd751e protein_coding protein_coding MGP_LPJ_T0060558.1 MGP_LPJ_G0027126.1 mouse_genomes_project 3 40514532 40532322 + MGP_LPJ_P0060558 D3Ertd751e protein_coding protein_coding MGP_LPJ_T0060559.1 MGP_LPJ_G0027126.1 mouse_genomes_project 3 40514535 40532781 + MGP_LPJ_P0060559 D3Ertd751e protein_coding nonsense_mediated_decay MGP_LPJ_T0060560.1 MGP_LPJ_G0027126.1 mouse_genomes_project 3 40514536 40532331 + MGP_LPJ_P0060560 D3Ertd751e protein_coding protein_coding MGP_LPJ_T0060561.1 MGP_LPJ_G0027126.1 mouse_genomes_project 3 40514536 40532331 + MGP_LPJ_P0060561 D3Ertd751e protein_coding protein_coding MGP_LPJ_T0060562.1 MGP_LPJ_G0027126.1 mouse_genomes_project 3 40514572 40532331 + MGP_LPJ_P0060562 D3Ertd751e protein_coding protein_coding MGP_LPJ_T0060563.1 MGP_LPJ_G0027126.1 mouse_genomes_project 3 40514574 40515839 + D3Ertd751e protein_coding retained_intron MGP_LPJ_T0060564.1 MGP_LPJ_G0027126.1 mouse_genomes_project 3 40514581 40531054 + MGP_LPJ_P0060564 D3Ertd751e protein_coding protein_coding MGP_LPJ_T0060565.1 MGP_LPJ_G0027126.1 mouse_genomes_project 3 40514643 40527175 + MGP_LPJ_P0060565 D3Ertd751e protein_coding protein_coding MGP_LPJ_T0060566.1 MGP_LPJ_G0027126.1 mouse_genomes_project 3 40516585 40529557 + MGP_LPJ_P0060566 D3Ertd751e protein_coding protein_coding MGP_LPJ_T0060567.1 MGP_LPJ_G0027126.1 mouse_genomes_project 3 40519141 40529573 + MGP_LPJ_P0060567 D3Ertd751e protein_coding protein_coding MGP_LPJ_T0060568.1 MGP_LPJ_G0027126.1 mouse_genomes_project 3 40519371 40532349 + MGP_LPJ_P0060568 D3Ertd751e protein_coding nonsense_mediated_decay MGP_LPJ_T0060569.1 MGP_LPJ_G0027126.1 mouse_genomes_project 3 40521239 40529908 + D3Ertd751e protein_coding retained_intron MGP_LPJ_T0098574.1 MGP_LPJ_G0036848.1 mouse_genomes_project 3 106832263 106834693 - Gm43260 sense_intronic sense_intronic MGP_LPJ_T0001301.1 MGP_LPJ_G0001221.1 mouse_genomes_project 3 98899553 98900348 - TEC TEC MGP_LPJ_T0001193.1 MGP_LPJ_G0001115.1 mouse_genomes_project 3 37121702 37122883 - TEC TEC MGP_LPJ_T0014162.1 MGP_LPJ_G0012253.1 mouse_genomes_project 3 101529990 101530574 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060099.1 MGP_LPJ_G0027047.1 mouse_genomes_project 3 25312993 25334556 + MGP_LPJ_P0060099 Tnfsf10 protein_coding protein_coding MGP_LPJ_T0060100.1 MGP_LPJ_G0027047.1 mouse_genomes_project 3 25313026 25337171 + MGP_LPJ_P0060100 Tnfsf10 protein_coding protein_coding MGP_LPJ_T0001418.1 MGP_LPJ_G0001337.1 mouse_genomes_project 3 160274939 160278931 + TEC TEC MGP_LPJ_T0001234.1 MGP_LPJ_G0001154.1 mouse_genomes_project 3 51246602 51248819 - TEC TEC MGP_LPJ_T0063306.1 MGP_LPJ_G0027753.1 mouse_genomes_project 3 123369821 123437528 - MGP_LPJ_P0063306 Ptbp2 protein_coding protein_coding MGP_LPJ_T0063307.1 MGP_LPJ_G0027753.1 mouse_genomes_project 3 123369821 123437944 - MGP_LPJ_P0063307 Ptbp2 protein_coding protein_coding MGP_LPJ_T0063308.1 MGP_LPJ_G0027753.1 mouse_genomes_project 3 123371399 123437374 - MGP_LPJ_P0063308 Ptbp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0063309.1 MGP_LPJ_G0027753.1 mouse_genomes_project 3 123371424 123377231 - MGP_LPJ_P0063309 Ptbp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0063310.1 MGP_LPJ_G0027753.1 mouse_genomes_project 3 123371463 123394049 - Ptbp2 protein_coding retained_intron MGP_LPJ_T0063311.1 MGP_LPJ_G0027753.1 mouse_genomes_project 3 123371888 123375478 - Ptbp2 protein_coding retained_intron MGP_LPJ_T0063312.1 MGP_LPJ_G0027753.1 mouse_genomes_project 3 123375197 123393680 - MGP_LPJ_P0063312 Ptbp2 protein_coding protein_coding MGP_LPJ_T0063313.1 MGP_LPJ_G0027753.1 mouse_genomes_project 3 123391891 123395939 - Ptbp2 protein_coding retained_intron MGP_LPJ_T0063314.1 MGP_LPJ_G0027753.1 mouse_genomes_project 3 123399805 123437426 - MGP_LPJ_P0063314 Ptbp2 protein_coding protein_coding MGP_LPJ_T0063315.1 MGP_LPJ_G0027753.1 mouse_genomes_project 3 123401081 123438604 - Ptbp2 protein_coding processed_transcript MGP_LPJ_T0063316.1 MGP_LPJ_G0027753.1 mouse_genomes_project 3 123414282 123438606 - Ptbp2 protein_coding processed_transcript MGP_LPJ_T0063317.1 MGP_LPJ_G0027753.1 mouse_genomes_project 3 123414287 123437831 - Ptbp2 protein_coding processed_transcript MGP_LPJ_T0063318.1 MGP_LPJ_G0027753.1 mouse_genomes_project 3 123414289 123437447 - MGP_LPJ_P0063318 Ptbp2 protein_coding protein_coding MGP_LPJ_T0013960.1 MGP_LPJ_G0012051.1 mouse_genomes_project 3 36390965 36391336 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100685.1 MGP_LPJ_G0038948.1 mouse_genomes_project 3 87112083 87112154 - Rnu73b snoRNA snoRNA MGP_LPJ_T0007536.1 MGP_LPJ_G0006175.1 mouse_genomes_project 3 39917926 39927557 - Gm42784 lincRNA lincRNA MGP_LPJ_T0007501.1 MGP_LPJ_G0006148.1 mouse_genomes_project 3 28724358 28725744 - lincRNA lincRNA MGP_LPJ_T0004232.1 MGP_LPJ_G0003728.1 mouse_genomes_project 3 29527564 29561461 + Gm15496 antisense antisense MGP_LPJ_T0004233.1 MGP_LPJ_G0003728.1 mouse_genomes_project 3 29554779 29559578 + Gm15496 antisense antisense MGP_LPJ_T0098544.1 MGP_LPJ_G0036818.1 mouse_genomes_project 3 101577935 101582297 + Gm43024 sense_intronic sense_intronic MGP_LPJ_T0014118.1 MGP_LPJ_G0012209.1 mouse_genomes_project 3 89413321 89413468 - processed_pseudogene processed_pseudogene MGP_LPJ_T0064256.1 MGP_LPJ_G0027924.1 mouse_genomes_project 3 159133430 159144125 + MGP_LPJ_P0064256 Asb17 protein_coding protein_coding MGP_LPJ_T0064257.1 MGP_LPJ_G0027924.1 mouse_genomes_project 3 159133487 159142630 + MGP_LPJ_P0064257 Asb17 protein_coding nonsense_mediated_decay MGP_LPJ_T0014269.1 MGP_LPJ_G0012360.1 mouse_genomes_project 3 135171537 135173364 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007750.1 MGP_LPJ_G0006341.1 mouse_genomes_project 3 147897761 147912005 + A830019L24Rik lincRNA lincRNA MGP_LPJ_T0007751.1 MGP_LPJ_G0006341.1 mouse_genomes_project 3 147898236 147913866 + A830019L24Rik lincRNA lincRNA MGP_LPJ_T0060849.1 MGP_LPJ_G0027186.1 mouse_genomes_project 3 59392439 59413213 + MGP_LPJ_P0060849 Gm5538 protein_coding protein_coding MGP_LPJ_T0060403.1 MGP_LPJ_G0027102.1 mouse_genomes_project 3 35463494 35497698 + 4932438A13Rik protein_coding retained_intron MGP_LPJ_T0060404.1 MGP_LPJ_G0027102.1 mouse_genomes_project 3 35463496 35666845 + MGP_LPJ_P0060404 4932438A13Rik protein_coding protein_coding MGP_LPJ_T0060405.1 MGP_LPJ_G0027102.1 mouse_genomes_project 3 35463511 35496332 + 4932438A13Rik protein_coding retained_intron MGP_LPJ_T0060406.1 MGP_LPJ_G0027102.1 mouse_genomes_project 3 35463511 35553941 + 4932438A13Rik protein_coding retained_intron MGP_LPJ_T0060407.1 MGP_LPJ_G0027102.1 mouse_genomes_project 3 35463544 35666832 + MGP_LPJ_P0060407 4932438A13Rik protein_coding unknown_likely_coding MGP_LPJ_T0060408.1 MGP_LPJ_G0027102.1 mouse_genomes_project 3 35463546 35558709 + MGP_LPJ_P0060408 4932438A13Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0060409.1 MGP_LPJ_G0027102.1 mouse_genomes_project 3 35464924 35542567 + 4932438A13Rik protein_coding retained_intron MGP_LPJ_T0060410.1 MGP_LPJ_G0027102.1 mouse_genomes_project 3 35476482 35666845 + MGP_LPJ_P0060410 4932438A13Rik protein_coding protein_coding MGP_LPJ_T0060411.1 MGP_LPJ_G0027102.1 mouse_genomes_project 3 35476495 35496339 + 4932438A13Rik protein_coding retained_intron MGP_LPJ_T0060412.1 MGP_LPJ_G0027102.1 mouse_genomes_project 3 35498175 35503781 + 4932438A13Rik protein_coding retained_intron MGP_LPJ_T0060413.1 MGP_LPJ_G0027102.1 mouse_genomes_project 3 35503690 35558711 + MGP_LPJ_P0060413 4932438A13Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0060414.1 MGP_LPJ_G0027102.1 mouse_genomes_project 3 35516178 35529367 + 4932438A13Rik protein_coding retained_intron MGP_LPJ_T0060415.1 MGP_LPJ_G0027102.1 mouse_genomes_project 3 35556777 35558706 + 4932438A13Rik protein_coding retained_intron MGP_LPJ_T0060416.1 MGP_LPJ_G0027102.1 mouse_genomes_project 3 35618828 35666827 + MGP_LPJ_P0060416 4932438A13Rik protein_coding protein_coding MGP_LPJ_T0060417.1 MGP_LPJ_G0027102.1 mouse_genomes_project 3 35623225 35666828 + MGP_LPJ_P0060417 4932438A13Rik protein_coding protein_coding MGP_LPJ_T0060418.1 MGP_LPJ_G0027102.1 mouse_genomes_project 3 35623356 35666826 + MGP_LPJ_P0060418 4932438A13Rik protein_coding protein_coding MGP_LPJ_T0060419.1 MGP_LPJ_G0027102.1 mouse_genomes_project 3 35626156 35641814 + MGP_LPJ_P0060419 4932438A13Rik protein_coding protein_coding MGP_LPJ_T0060420.1 MGP_LPJ_G0027102.1 mouse_genomes_project 3 35630479 35635478 + 4932438A13Rik protein_coding retained_intron MGP_LPJ_T0060421.1 MGP_LPJ_G0027102.1 mouse_genomes_project 3 35631802 35635708 + 4932438A13Rik protein_coding retained_intron MGP_LPJ_T0060422.1 MGP_LPJ_G0027102.1 mouse_genomes_project 3 35636050 35649661 + 4932438A13Rik protein_coding retained_intron MGP_LPJ_T0060423.1 MGP_LPJ_G0027102.1 mouse_genomes_project 3 35649643 35652738 + 4932438A13Rik protein_coding retained_intron MGP_LPJ_T0060424.1 MGP_LPJ_G0027102.1 mouse_genomes_project 3 35650340 35652740 + 4932438A13Rik protein_coding retained_intron MGP_LPJ_T0060425.1 MGP_LPJ_G0027102.1 mouse_genomes_project 3 35655827 35658568 + 4932438A13Rik protein_coding retained_intron MGP_LPJ_T0061608.1 MGP_LPJ_G0027352.1 mouse_genomes_project 3 90407585 90418038 + MGP_LPJ_P0061608 Pklr protein_coding protein_coding MGP_LPJ_T0061609.1 MGP_LPJ_G0027352.1 mouse_genomes_project 3 90407617 90408903 + Pklr protein_coding processed_transcript MGP_LPJ_T0061610.1 MGP_LPJ_G0027352.1 mouse_genomes_project 3 90408015 90418211 + MGP_LPJ_P0061610 Pklr protein_coding protein_coding MGP_LPJ_T0061611.1 MGP_LPJ_G0027352.1 mouse_genomes_project 3 90408022 90412983 + MGP_LPJ_P0061611 Pklr protein_coding protein_coding MGP_LPJ_T0061612.1 MGP_LPJ_G0027352.1 mouse_genomes_project 3 90408066 90412356 + Pklr protein_coding processed_transcript MGP_LPJ_T0001246.1 MGP_LPJ_G0001166.1 mouse_genomes_project 3 53084706 53086308 + TEC TEC MGP_LPJ_T0014304.1 MGP_LPJ_G0012395.1 mouse_genomes_project 3 143070313 143070973 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060967.1 MGP_LPJ_G0027214.1 mouse_genomes_project 3 67062296 67444898 + MGP_LPJ_P0060967 Rsrc1 protein_coding protein_coding MGP_LPJ_T0060968.1 MGP_LPJ_G0027214.1 mouse_genomes_project 3 67067661 67078408 + MGP_LPJ_P0060968 Rsrc1 protein_coding protein_coding MGP_LPJ_T0060969.1 MGP_LPJ_G0027214.1 mouse_genomes_project 3 67067663 67446734 + MGP_LPJ_P0060969 Rsrc1 protein_coding protein_coding MGP_LPJ_T0060970.1 MGP_LPJ_G0027214.1 mouse_genomes_project 3 67067676 67171461 + Rsrc1 protein_coding retained_intron MGP_LPJ_T0060971.1 MGP_LPJ_G0027214.1 mouse_genomes_project 3 67067676 67442087 + MGP_LPJ_P0060971 Rsrc1 protein_coding protein_coding MGP_LPJ_T0060972.1 MGP_LPJ_G0027214.1 mouse_genomes_project 3 67067694 67446729 + MGP_LPJ_P0060972 Rsrc1 protein_coding protein_coding MGP_LPJ_T0060973.1 MGP_LPJ_G0027214.1 mouse_genomes_project 3 67067695 67444897 + MGP_LPJ_P0060973 Rsrc1 protein_coding protein_coding MGP_LPJ_T0060974.1 MGP_LPJ_G0027214.1 mouse_genomes_project 3 67067958 67446735 + MGP_LPJ_P0060974 Rsrc1 protein_coding protein_coding MGP_LPJ_T0060975.1 MGP_LPJ_G0027214.1 mouse_genomes_project 3 67067969 67076646 + MGP_LPJ_P0060975 Rsrc1 protein_coding protein_coding MGP_LPJ_T0060976.1 MGP_LPJ_G0027214.1 mouse_genomes_project 3 67072906 67076827 + Rsrc1 protein_coding retained_intron MGP_LPJ_T0060048.1 MGP_LPJ_G0027037.1 mouse_genomes_project 3 17987090 18020324 - MGP_LPJ_P0060048 Gyg protein_coding protein_coding MGP_LPJ_T0060049.1 MGP_LPJ_G0027037.1 mouse_genomes_project 3 17987093 18020103 - MGP_LPJ_P0060049 Gyg protein_coding protein_coding MGP_LPJ_T0060050.1 MGP_LPJ_G0027037.1 mouse_genomes_project 3 17987153 18020076 - MGP_LPJ_P0060050 Gyg protein_coding protein_coding MGP_LPJ_T0060051.1 MGP_LPJ_G0027037.1 mouse_genomes_project 3 17987562 17988550 - Gyg protein_coding retained_intron MGP_LPJ_T0062748.1 MGP_LPJ_G0027624.1 mouse_genomes_project 3 106432076 106438531 - Dclre1b protein_coding retained_intron MGP_LPJ_T0062749.1 MGP_LPJ_G0027624.1 mouse_genomes_project 3 106432094 106437386 - MGP_LPJ_P0062749 Dclre1b protein_coding protein_coding MGP_LPJ_T0062750.1 MGP_LPJ_G0027624.1 mouse_genomes_project 3 106432159 106438294 - MGP_LPJ_P0062750 Dclre1b protein_coding protein_coding MGP_LPJ_T0062751.1 MGP_LPJ_G0027624.1 mouse_genomes_project 3 106432790 106436843 - Dclre1b protein_coding retained_intron MGP_LPJ_T0062752.1 MGP_LPJ_G0027624.1 mouse_genomes_project 3 106433218 106438398 - MGP_LPJ_P0062752 Dclre1b protein_coding nonsense_mediated_decay MGP_LPJ_T0062753.1 MGP_LPJ_G0027624.1 mouse_genomes_project 3 106435124 106438595 - MGP_LPJ_P0062753 Dclre1b protein_coding protein_coding MGP_LPJ_T0061872.1 MGP_LPJ_G0027393.1 mouse_genomes_project 3 91593552 91597594 + MGP_LPJ_P0061872 Jtb protein_coding protein_coding MGP_LPJ_T0061873.1 MGP_LPJ_G0027393.1 mouse_genomes_project 3 91593567 91597300 + MGP_LPJ_P0061873 Jtb protein_coding protein_coding MGP_LPJ_T0061874.1 MGP_LPJ_G0027393.1 mouse_genomes_project 3 91593589 91597175 + Jtb protein_coding retained_intron MGP_LPJ_T0061875.1 MGP_LPJ_G0027393.1 mouse_genomes_project 3 91594002 91595758 + Jtb protein_coding retained_intron MGP_LPJ_T0014230.1 MGP_LPJ_G0012321.1 mouse_genomes_project 3 120476249 120476979 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014040.1 MGP_LPJ_G0012131.1 mouse_genomes_project 3 63713311 63713962 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098031.1 MGP_LPJ_G0036312.1 mouse_genomes_project 3 159074332 159074414 + pseudogene pseudogene MGP_LPJ_T0100720.1 MGP_LPJ_G0038983.1 mouse_genomes_project 3 153332839 153332971 - Gm23131 snoRNA snoRNA MGP_LPJ_T0014115.1 MGP_LPJ_G0012206.1 mouse_genomes_project 3 88087283 88087592 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007725.1 MGP_LPJ_G0006318.1 mouse_genomes_project 3 137577403 137579875 - Gm43254 lincRNA lincRNA MGP_LPJ_T0010524.1 MGP_LPJ_G0008642.1 mouse_genomes_project 3 29250187 29250250 + Mir7008 miRNA miRNA MGP_LPJ_T0060895.1 MGP_LPJ_G0027198.1 mouse_genomes_project 3 63103361 63193638 + MGP_LPJ_P0060895 Mme protein_coding protein_coding MGP_LPJ_T0060896.1 MGP_LPJ_G0027198.1 mouse_genomes_project 3 63161071 63194007 + MGP_LPJ_P0060896 Mme protein_coding protein_coding MGP_LPJ_T0060897.1 MGP_LPJ_G0027198.1 mouse_genomes_project 3 63161253 63193999 + MGP_LPJ_P0060897 Mme protein_coding protein_coding MGP_LPJ_T0060898.1 MGP_LPJ_G0027198.1 mouse_genomes_project 3 63161366 63254147 + MGP_LPJ_P0060898 Mme protein_coding protein_coding MGP_LPJ_T0060899.1 MGP_LPJ_G0027198.1 mouse_genomes_project 3 63161677 63259083 + MGP_LPJ_P0060899 Mme protein_coding protein_coding MGP_LPJ_T0060900.1 MGP_LPJ_G0027198.1 mouse_genomes_project 3 63161900 63254674 + MGP_LPJ_P0060900 Mme protein_coding protein_coding MGP_LPJ_T0060901.1 MGP_LPJ_G0027198.1 mouse_genomes_project 3 63162865 63193879 + MGP_LPJ_P0060901 Mme protein_coding protein_coding MGP_LPJ_T0060902.1 MGP_LPJ_G0027198.1 mouse_genomes_project 3 63165977 63220911 + Mme protein_coding retained_intron MGP_LPJ_T0061071.1 MGP_LPJ_G0027241.1 mouse_genomes_project 3 75785532 75955778 - MGP_LPJ_P0061071 Wdr49 protein_coding protein_coding MGP_LPJ_T0061072.1 MGP_LPJ_G0027241.1 mouse_genomes_project 3 75889560 75928962 - MGP_LPJ_P0061072 Wdr49 protein_coding protein_coding MGP_LPJ_T0061073.1 MGP_LPJ_G0027241.1 mouse_genomes_project 3 75889560 75955779 - MGP_LPJ_P0061073 Wdr49 protein_coding protein_coding MGP_LPJ_T0061074.1 MGP_LPJ_G0027241.1 mouse_genomes_project 3 75953433 75956194 - Wdr49 protein_coding retained_intron MGP_LPJ_T0062152.1 MGP_LPJ_G0027493.1 mouse_genomes_project 3 96976674 96981892 - Zfp687 protein_coding retained_intron MGP_LPJ_T0062153.1 MGP_LPJ_G0027493.1 mouse_genomes_project 3 96976786 96985323 - MGP_LPJ_P0062153 Zfp687 protein_coding protein_coding MGP_LPJ_T0062154.1 MGP_LPJ_G0027493.1 mouse_genomes_project 3 96976916 96985308 - Zfp687 protein_coding retained_intron MGP_LPJ_T0062155.1 MGP_LPJ_G0027493.1 mouse_genomes_project 3 96976916 96985489 - Zfp687 protein_coding retained_intron MGP_LPJ_T0062156.1 MGP_LPJ_G0027493.1 mouse_genomes_project 3 96976921 96985522 - MGP_LPJ_P0062156 Zfp687 protein_coding nonsense_mediated_decay MGP_LPJ_T0062157.1 MGP_LPJ_G0027493.1 mouse_genomes_project 3 96981924 96985533 - MGP_LPJ_P0062157 Zfp687 protein_coding protein_coding MGP_LPJ_T0062158.1 MGP_LPJ_G0027493.1 mouse_genomes_project 3 96982053 96985309 - MGP_LPJ_P0062158 Zfp687 protein_coding protein_coding MGP_LPJ_T0062159.1 MGP_LPJ_G0027493.1 mouse_genomes_project 3 96982258 96985303 - MGP_LPJ_P0062159 Zfp687 protein_coding protein_coding MGP_LPJ_T0060991.1 MGP_LPJ_G0027220.1 mouse_genomes_project 3 67996906 68170248 + MGP_LPJ_P0060991 Iqcj protein_coding protein_coding MGP_LPJ_T0060993.1 MGP_LPJ_G0027220.1 mouse_genomes_project 3 67996999 68177737 + MGP_LPJ_P0060993 Iqcj protein_coding unknown_likely_coding MGP_LPJ_T0001245.1 MGP_LPJ_G0001165.1 mouse_genomes_project 3 52838926 52840085 + TEC TEC MGP_LPJ_T0061165.1 MGP_LPJ_G0027261.1 mouse_genomes_project 3 82829677 82873967 - MGP_LPJ_P0061165 Gucy1b3 protein_coding protein_coding MGP_LPJ_T0061166.1 MGP_LPJ_G0027261.1 mouse_genomes_project 3 82831991 82833001 - Gucy1b3 protein_coding retained_intron MGP_LPJ_T0061167.1 MGP_LPJ_G0027261.1 mouse_genomes_project 3 82848707 82874066 - Gucy1b3 protein_coding processed_transcript MGP_LPJ_T0063231.1 MGP_LPJ_G0027737.1 mouse_genomes_project 3 119940093 119960390 - MGP_LPJ_P0063231 Rtca protein_coding protein_coding MGP_LPJ_T0063232.1 MGP_LPJ_G0027737.1 mouse_genomes_project 3 119940370 119948153 - Rtca protein_coding retained_intron MGP_LPJ_T0063233.1 MGP_LPJ_G0027737.1 mouse_genomes_project 3 119946338 119960206 - MGP_LPJ_P0063233 Rtca protein_coding nonsense_mediated_decay MGP_LPJ_T0063234.1 MGP_LPJ_G0027737.1 mouse_genomes_project 3 119947878 119960247 - MGP_LPJ_P0063234 Rtca protein_coding protein_coding MGP_LPJ_T0063235.1 MGP_LPJ_G0027737.1 mouse_genomes_project 3 119951733 119960315 - MGP_LPJ_P0063235 Rtca protein_coding nonsense_mediated_decay MGP_LPJ_T0062929.1 MGP_LPJ_G0027663.1 mouse_genomes_project 3 109625929 109656499 - MGP_LPJ_P0062929 Cd53 protein_coding protein_coding MGP_LPJ_T0007566.1 MGP_LPJ_G0006197.1 mouse_genomes_project 3 54030164 54033353 + Gm26678 lincRNA lincRNA MGP_LPJ_T0014140.1 MGP_LPJ_G0012231.1 mouse_genomes_project 3 95175070 95175622 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014188.1 MGP_LPJ_G0012279.1 mouse_genomes_project 3 107312116 107312458 - processed_pseudogene processed_pseudogene MGP_LPJ_T0059906.1 MGP_LPJ_G0026996.1 mouse_genomes_project 3 7478626 7483365 + MGP_LPJ_P0059906 Fabp5 protein_coding protein_coding MGP_LPJ_T0059907.1 MGP_LPJ_G0026996.1 mouse_genomes_project 3 7478683 7483093 + Fabp5 protein_coding retained_intron MGP_LPJ_T0061738.1 MGP_LPJ_G0027373.1 mouse_genomes_project 3 90693501 90705970 - MGP_LPJ_P0061738 Flad1 protein_coding protein_coding MGP_LPJ_T0061739.1 MGP_LPJ_G0027373.1 mouse_genomes_project 3 90694466 90705963 - MGP_LPJ_P0061739 Flad1 protein_coding protein_coding MGP_LPJ_T0061740.1 MGP_LPJ_G0027373.1 mouse_genomes_project 3 90695164 90705969 - MGP_LPJ_P0061740 Flad1 protein_coding protein_coding MGP_LPJ_T0061741.1 MGP_LPJ_G0027373.1 mouse_genomes_project 3 90702829 90705881 - MGP_LPJ_P0061741 Flad1 protein_coding protein_coding MGP_LPJ_T0061742.1 MGP_LPJ_G0027373.1 mouse_genomes_project 3 90703054 90705970 - MGP_LPJ_P0061742 Flad1 protein_coding protein_coding MGP_LPJ_T0001276.1 MGP_LPJ_G0001196.1 mouse_genomes_project 3 76099900 76105836 + TEC TEC MGP_LPJ_T0059969.1 MGP_LPJ_G0027017.1 mouse_genomes_project 3 13067122 13092585 - MGP_LPJ_P0059969 Gm9733 protein_coding protein_coding MGP_LPJ_T0010554.1 MGP_LPJ_G0008672.1 mouse_genomes_project 3 95125746 95125884 + Gm44353 miRNA miRNA MGP_LPJ_T0013959.1 MGP_LPJ_G0012050.1 mouse_genomes_project 3 36201455 36201776 - processed_pseudogene processed_pseudogene MGP_LPJ_T0061382.1 MGP_LPJ_G0027312.1 mouse_genomes_project 3 89071964 89074278 + Nes protein_coding retained_intron MGP_LPJ_T0061383.1 MGP_LPJ_G0027312.1 mouse_genomes_project 3 89071979 89081338 + MGP_LPJ_P0061383 Nes protein_coding protein_coding MGP_LPJ_T0061384.1 MGP_LPJ_G0027312.1 mouse_genomes_project 3 89072015 89081338 + MGP_LPJ_P0061384 Nes protein_coding protein_coding MGP_LPJ_T0010581.1 MGP_LPJ_G0008699.1 mouse_genomes_project 3 142982477 142982542 + Mir1956 miRNA miRNA MGP_LPJ_T0013944.1 MGP_LPJ_G0012035.1 mouse_genomes_project 3 32503938 32507673 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010516.1 MGP_LPJ_G0008634.1 mouse_genomes_project 3 15589399 15589508 + Mir124a-2 miRNA miRNA MGP_LPJ_T0060591.1 MGP_LPJ_G0027132.1 mouse_genomes_project 3 50464858 50555468 - MGP_LPJ_P0060591 Elf2 protein_coding protein_coding MGP_LPJ_T0060592.1 MGP_LPJ_G0027132.1 mouse_genomes_project 3 50467377 50538633 - MGP_LPJ_P0060592 Elf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0060593.1 MGP_LPJ_G0027132.1 mouse_genomes_project 3 50467378 50555449 - MGP_LPJ_P0060593 Elf2 protein_coding protein_coding MGP_LPJ_T0060594.1 MGP_LPJ_G0027132.1 mouse_genomes_project 3 50467810 50489994 - MGP_LPJ_P0060594 Elf2 protein_coding protein_coding MGP_LPJ_T0060595.1 MGP_LPJ_G0027132.1 mouse_genomes_project 3 50467812 50490154 - MGP_LPJ_P0060595 Elf2 protein_coding protein_coding MGP_LPJ_T0060596.1 MGP_LPJ_G0027132.1 mouse_genomes_project 3 50467812 50490093 - MGP_LPJ_P0060596 Elf2 protein_coding protein_coding MGP_LPJ_T0060597.1 MGP_LPJ_G0027132.1 mouse_genomes_project 3 50467832 50538591 - MGP_LPJ_P0060597 Elf2 protein_coding protein_coding MGP_LPJ_T0060598.1 MGP_LPJ_G0027132.1 mouse_genomes_project 3 50470830 50472386 - Elf2 protein_coding retained_intron MGP_LPJ_T0060599.1 MGP_LPJ_G0027132.1 mouse_genomes_project 3 50476990 50489947 - MGP_LPJ_P0060599 Elf2 protein_coding protein_coding MGP_LPJ_T0060600.1 MGP_LPJ_G0027132.1 mouse_genomes_project 3 50476990 50555463 - MGP_LPJ_P0060600 Elf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0060601.1 MGP_LPJ_G0027132.1 mouse_genomes_project 3 50477006 50555366 - Elf2 protein_coding processed_transcript MGP_LPJ_T0060602.1 MGP_LPJ_G0027132.1 mouse_genomes_project 3 50477006 50490003 - MGP_LPJ_P0060602 Elf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0060603.1 MGP_LPJ_G0027132.1 mouse_genomes_project 3 50477170 50490023 - MGP_LPJ_P0060603 Elf2 protein_coding protein_coding MGP_LPJ_T0098575.1 MGP_LPJ_G0036849.1 mouse_genomes_project 3 106838728 106841812 - Gm43256 sense_intronic sense_intronic MGP_LPJ_T0001235.1 MGP_LPJ_G0001155.1 mouse_genomes_project 3 51251901 51252520 - TEC TEC MGP_LPJ_T0010586.1 MGP_LPJ_G0008704.1 mouse_genomes_project 3 163016420 163016491 + Mir186 miRNA miRNA MGP_LPJ_T0014078.1 MGP_LPJ_G0012169.1 mouse_genomes_project 3 72356636 72357141 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007763.1 MGP_LPJ_G0006352.1 mouse_genomes_project 3 148566278 148646560 - Gm42707 lincRNA lincRNA MGP_LPJ_T0007765.1 MGP_LPJ_G0006352.1 mouse_genomes_project 3 148601620 148646185 - Gm42707 lincRNA lincRNA MGP_LPJ_T0001425.1 MGP_LPJ_G0001344.1 mouse_genomes_project 3 162670460 162671659 - TEC TEC MGP_LPJ_T0004346.1 MGP_LPJ_G0003809.1 mouse_genomes_project 3 106605762 106609808 - Phtf1os antisense antisense MGP_LPJ_T0100690.1 MGP_LPJ_G0038953.1 mouse_genomes_project 3 90316979 90317109 - Gm24403 snoRNA snoRNA MGP_LPJ_T0098584.1 MGP_LPJ_G0036858.1 mouse_genomes_project 3 108258488 108260428 + Gm43847 sense_intronic sense_intronic MGP_LPJ_T0061512.1 MGP_LPJ_G0027339.1 mouse_genomes_project 3 89757822 89769018 + MGP_LPJ_P0061512 Ssr2 protein_coding protein_coding MGP_LPJ_T0061513.1 MGP_LPJ_G0027339.1 mouse_genomes_project 3 89757885 89762902 + MGP_LPJ_P0061513 Ssr2 protein_coding protein_coding MGP_LPJ_T0061514.1 MGP_LPJ_G0027339.1 mouse_genomes_project 3 89762526 89774709 + MGP_LPJ_P0061514 Ssr2 protein_coding protein_coding MGP_LPJ_T0061515.1 MGP_LPJ_G0027339.1 mouse_genomes_project 3 89762559 89774309 + MGP_LPJ_P0061515 Ssr2 protein_coding protein_coding MGP_LPJ_T0061516.1 MGP_LPJ_G0027339.1 mouse_genomes_project 3 89762585 89774323 + MGP_LPJ_P0061516 Ssr2 protein_coding protein_coding MGP_LPJ_T0061517.1 MGP_LPJ_G0027339.1 mouse_genomes_project 3 89762589 89774709 + MGP_LPJ_P0061517 Ssr2 protein_coding protein_coding MGP_LPJ_T0001374.1 MGP_LPJ_G0001293.1 mouse_genomes_project 3 133714598 133716269 + TEC TEC MGP_LPJ_T0014248.1 MGP_LPJ_G0012339.1 mouse_genomes_project 3 126853590 126854014 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014096.1 MGP_LPJ_G0012187.1 mouse_genomes_project 3 79487808 79488474 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060671.1 MGP_LPJ_G0027148.1 mouse_genomes_project 3 53521857 53545739 + Trpc4 protein_coding processed_transcript MGP_LPJ_T0060672.1 MGP_LPJ_G0027148.1 mouse_genomes_project 3 53521879 53697277 + MGP_LPJ_P0060672 Trpc4 protein_coding protein_coding MGP_LPJ_T0060673.1 MGP_LPJ_G0027148.1 mouse_genomes_project 3 53521888 53641025 + Trpc4 protein_coding retained_intron MGP_LPJ_T0060674.1 MGP_LPJ_G0027148.1 mouse_genomes_project 3 53521926 53697273 + MGP_LPJ_P0060674 Trpc4 protein_coding protein_coding MGP_LPJ_T0060675.1 MGP_LPJ_G0027148.1 mouse_genomes_project 3 53522195 53596222 + Trpc4 protein_coding retained_intron MGP_LPJ_T0060676.1 MGP_LPJ_G0027148.1 mouse_genomes_project 3 53522437 53697222 + MGP_LPJ_P0060676 Trpc4 protein_coding nonsense_mediated_decay MGP_LPJ_T0062841.1 MGP_LPJ_G0027643.1 mouse_genomes_project 3 108206352 108448978 + MGP_LPJ_P0062841 Kcnd3 protein_coding protein_coding MGP_LPJ_T0062842.1 MGP_LPJ_G0027643.1 mouse_genomes_project 3 108206595 108442565 + Kcnd3 protein_coding retained_intron MGP_LPJ_T0062843.1 MGP_LPJ_G0027643.1 mouse_genomes_project 3 108207108 108444436 + MGP_LPJ_P0062843 Kcnd3 protein_coding protein_coding MGP_LPJ_T0062844.1 MGP_LPJ_G0027643.1 mouse_genomes_project 3 108214285 108444285 + MGP_LPJ_P0062844 Kcnd3 protein_coding protein_coding MGP_LPJ_T0062845.1 MGP_LPJ_G0027643.1 mouse_genomes_project 3 108443980 108444820 + Kcnd3 protein_coding processed_transcript MGP_LPJ_T0100706.1 MGP_LPJ_G0038969.1 mouse_genomes_project 3 119484033 119484165 - Gm26344 snoRNA snoRNA MGP_LPJ_T0063688.1 MGP_LPJ_G0027820.1 mouse_genomes_project 3 137144585 137213238 - MGP_LPJ_P0063688 Npnt protein_coding protein_coding MGP_LPJ_T0063689.1 MGP_LPJ_G0027820.1 mouse_genomes_project 3 137145523 137213107 - MGP_LPJ_P0063689 Npnt protein_coding protein_coding MGP_LPJ_T0063690.1 MGP_LPJ_G0027820.1 mouse_genomes_project 3 137147270 137212990 - MGP_LPJ_P0063690 Npnt protein_coding protein_coding MGP_LPJ_T0063691.1 MGP_LPJ_G0027820.1 mouse_genomes_project 3 137147270 137212990 - MGP_LPJ_P0063691 Npnt protein_coding protein_coding MGP_LPJ_T0063692.1 MGP_LPJ_G0027820.1 mouse_genomes_project 3 137147270 137212990 - MGP_LPJ_P0063692 Npnt protein_coding protein_coding MGP_LPJ_T0063693.1 MGP_LPJ_G0027820.1 mouse_genomes_project 3 137154006 137169186 - Npnt protein_coding retained_intron MGP_LPJ_T0007732.1 MGP_LPJ_G0006324.1 mouse_genomes_project 3 138760102 138941116 - lincRNA lincRNA MGP_LPJ_T0001227.1 MGP_LPJ_G0001148.1 mouse_genomes_project 3 51002497 51007464 - TEC TEC MGP_LPJ_T0064085.1 MGP_LPJ_G0027900.1 mouse_genomes_project 3 151405258 151410970 + MGP_LPJ_P0064085 Gng5 protein_coding protein_coding MGP_LPJ_T0064086.1 MGP_LPJ_G0027900.1 mouse_genomes_project 3 151405477 151410971 + MGP_LPJ_P0064086 Gng5 protein_coding protein_coding MGP_LPJ_T0014121.1 MGP_LPJ_G0012212.1 mouse_genomes_project 3 90387324 90387577 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013920.1 MGP_LPJ_G0012011.1 mouse_genomes_project 3 18967655 18968076 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007589.1 MGP_LPJ_G0006214.1 mouse_genomes_project 3 73721661 73853494 - lincRNA lincRNA MGP_LPJ_T0013973.1 MGP_LPJ_G0012064.1 mouse_genomes_project 3 42044382 42044809 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062728.1 MGP_LPJ_G0027620.1 mouse_genomes_project 3 106201584 106255149 + MGP_LPJ_P0062728 Syt6 protein_coding protein_coding MGP_LPJ_T0062729.1 MGP_LPJ_G0027620.1 mouse_genomes_project 3 106201634 106259407 + MGP_LPJ_P0062729 Syt6 protein_coding protein_coding MGP_LPJ_T0062730.1 MGP_LPJ_G0027620.1 mouse_genomes_project 3 106201635 106259407 + MGP_LPJ_P0062730 Syt6 protein_coding nonsense_mediated_decay MGP_LPJ_T0062731.1 MGP_LPJ_G0027620.1 mouse_genomes_project 3 106201653 106256996 + MGP_LPJ_P0062731 Syt6 protein_coding nonsense_mediated_decay MGP_LPJ_T0062732.1 MGP_LPJ_G0027620.1 mouse_genomes_project 3 106201731 106255130 + MGP_LPJ_P0062732 Syt6 protein_coding nonsense_mediated_decay MGP_LPJ_T0062733.1 MGP_LPJ_G0027620.1 mouse_genomes_project 3 106201778 106255122 + MGP_LPJ_P0062733 Syt6 protein_coding unknown_likely_coding MGP_LPJ_T0062734.1 MGP_LPJ_G0027620.1 mouse_genomes_project 3 106203270 106214373 + MGP_LPJ_P0062734 Syt6 protein_coding protein_coding MGP_LPJ_T0062735.1 MGP_LPJ_G0027620.1 mouse_genomes_project 3 106203331 106251810 + MGP_LPJ_P0062735 Syt6 protein_coding protein_coding MGP_LPJ_T0064300.1 MGP_LPJ_G0027931.1 mouse_genomes_project 3 159934107 159960837 + MGP_LPJ_P0064300 Cryz protein_coding protein_coding MGP_LPJ_T0064301.1 MGP_LPJ_G0027931.1 mouse_genomes_project 3 159934107 159960835 + MGP_LPJ_P0064301 Cryz protein_coding protein_coding MGP_LPJ_T0064302.1 MGP_LPJ_G0027931.1 mouse_genomes_project 3 159934107 159960837 + MGP_LPJ_P0064302 Cryz protein_coding nonsense_mediated_decay MGP_LPJ_T0064303.1 MGP_LPJ_G0027931.1 mouse_genomes_project 3 159934540 159959822 + MGP_LPJ_P0064303 Cryz protein_coding protein_coding MGP_LPJ_T0064304.1 MGP_LPJ_G0027931.1 mouse_genomes_project 3 159934593 159949217 + MGP_LPJ_P0064304 Cryz protein_coding protein_coding MGP_LPJ_T0064305.1 MGP_LPJ_G0027931.1 mouse_genomes_project 3 159934618 159956259 + MGP_LPJ_P0064305 Cryz protein_coding nonsense_mediated_decay MGP_LPJ_T0064306.1 MGP_LPJ_G0027931.1 mouse_genomes_project 3 159934741 159949099 + MGP_LPJ_P0064306 Cryz protein_coding protein_coding MGP_LPJ_T0064307.1 MGP_LPJ_G0027931.1 mouse_genomes_project 3 159934791 159951511 + MGP_LPJ_P0064307 Cryz protein_coding protein_coding MGP_LPJ_T0064308.1 MGP_LPJ_G0027931.1 mouse_genomes_project 3 159934827 159956159 + MGP_LPJ_P0064308 Cryz protein_coding protein_coding MGP_LPJ_T0064309.1 MGP_LPJ_G0027931.1 mouse_genomes_project 3 159945219 159959825 + MGP_LPJ_P0064309 Cryz protein_coding protein_coding MGP_LPJ_T0064310.1 MGP_LPJ_G0027931.1 mouse_genomes_project 3 159953544 159957020 + Cryz protein_coding retained_intron MGP_LPJ_T0014004.1 MGP_LPJ_G0012095.1 mouse_genomes_project 3 52264519 52264838 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013881.1 MGP_LPJ_G0011972.1 mouse_genomes_project 3 8282669 8283180 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007549.1 MGP_LPJ_G0006182.1 mouse_genomes_project 3 47864487 47879232 - Gm37190 lincRNA lincRNA MGP_LPJ_T0013875.1 MGP_LPJ_G0011966.1 mouse_genomes_project 3 7366256 7369204 + processed_pseudogene processed_pseudogene MGP_LPJ_T0063032.1 MGP_LPJ_G0027694.1 mouse_genomes_project 3 111143427 111148869 + MGP_LPJ_P0063032 Amigo1 protein_coding protein_coding MGP_LPJ_T0063033.1 MGP_LPJ_G0027694.1 mouse_genomes_project 3 111143442 111148870 + MGP_LPJ_P0063033 Amigo1 protein_coding protein_coding MGP_LPJ_T0063034.1 MGP_LPJ_G0027694.1 mouse_genomes_project 3 111143450 111149379 + MGP_LPJ_P0063034 Amigo1 protein_coding protein_coding MGP_LPJ_T0063035.1 MGP_LPJ_G0027694.1 mouse_genomes_project 3 111145135 111148868 + MGP_LPJ_P0063035 Amigo1 protein_coding protein_coding MGP_LPJ_T0063036.1 MGP_LPJ_G0027694.1 mouse_genomes_project 3 111145193 111148860 + MGP_LPJ_P0063036 Amigo1 protein_coding protein_coding MGP_LPJ_T0063221.1 MGP_LPJ_G0027735.1 mouse_genomes_project 3 119681402 119685256 - MGP_LPJ_P0063221 Gpr88 protein_coding protein_coding MGP_LPJ_T0063222.1 MGP_LPJ_G0027735.1 mouse_genomes_project 3 119684311 119684842 - MGP_LPJ_P0063222 Gpr88 protein_coding protein_coding MGP_LPJ_T0063223.1 MGP_LPJ_G0027735.1 mouse_genomes_project 3 119684424 119685216 - Gpr88 protein_coding processed_transcript MGP_LPJ_T0064266.1 MGP_LPJ_G0027926.1 mouse_genomes_project 3 159203698 159208711 - MGP_LPJ_P0064266 Rabggtb protein_coding nonsense_mediated_decay MGP_LPJ_T0064267.1 MGP_LPJ_G0027926.1 mouse_genomes_project 3 159203700 159209409 - MGP_LPJ_P0064267 Rabggtb protein_coding protein_coding MGP_LPJ_T0064268.1 MGP_LPJ_G0027926.1 mouse_genomes_project 3 159203700 159208545 - MGP_LPJ_P0064268 Rabggtb protein_coding protein_coding MGP_LPJ_T0064269.1 MGP_LPJ_G0027926.1 mouse_genomes_project 3 159203702 159209327 - MGP_LPJ_P0064269 Rabggtb protein_coding nonsense_mediated_decay MGP_LPJ_T0064270.1 MGP_LPJ_G0027926.1 mouse_genomes_project 3 159203704 159209393 - MGP_LPJ_P0064270 Rabggtb protein_coding nonsense_mediated_decay MGP_LPJ_T0064271.1 MGP_LPJ_G0027926.1 mouse_genomes_project 3 159203865 159208481 - MGP_LPJ_P0064271 Rabggtb protein_coding nonsense_mediated_decay MGP_LPJ_T0064272.1 MGP_LPJ_G0027926.1 mouse_genomes_project 3 159203983 159208481 - MGP_LPJ_P0064272 Rabggtb protein_coding nonsense_mediated_decay MGP_LPJ_T0064273.1 MGP_LPJ_G0027926.1 mouse_genomes_project 3 159203983 159208481 - MGP_LPJ_P0064273 Rabggtb protein_coding nonsense_mediated_decay MGP_LPJ_T0064274.1 MGP_LPJ_G0027926.1 mouse_genomes_project 3 159203983 159208481 - MGP_LPJ_P0064274 Rabggtb protein_coding nonsense_mediated_decay MGP_LPJ_T0064275.1 MGP_LPJ_G0027926.1 mouse_genomes_project 3 159204482 159208433 - MGP_LPJ_P0064275 Rabggtb protein_coding nonsense_mediated_decay MGP_LPJ_T0064276.1 MGP_LPJ_G0027926.1 mouse_genomes_project 3 159205819 159209355 - MGP_LPJ_P0064276 Rabggtb protein_coding nonsense_mediated_decay MGP_LPJ_T0064277.1 MGP_LPJ_G0027926.1 mouse_genomes_project 3 159208385 159209331 - Rabggtb protein_coding processed_transcript MGP_LPJ_T0014229.1 MGP_LPJ_G0012320.1 mouse_genomes_project 3 120303605 120303995 + processed_pseudogene processed_pseudogene MGP_LPJ_T0063111.1 MGP_LPJ_G0027711.1 mouse_genomes_project 3 111725624 111780885 + MGP_LPJ_P0063111 Aknad1 protein_coding protein_coding MGP_LPJ_T0063112.1 MGP_LPJ_G0027711.1 mouse_genomes_project 3 111729359 111767874 + MGP_LPJ_P0063112 Aknad1 protein_coding nonsense_mediated_decay MGP_LPJ_T0063113.1 MGP_LPJ_G0027711.1 mouse_genomes_project 3 111738893 111751306 + Aknad1 protein_coding retained_intron MGP_LPJ_T0063114.1 MGP_LPJ_G0027711.1 mouse_genomes_project 3 111749423 111767579 + Aknad1 protein_coding retained_intron MGP_LPJ_T0061959.1 MGP_LPJ_G0027411.1 mouse_genomes_project 3 91992708 91994992 + MGP_LPJ_P0061959 S100a4 protein_coding protein_coding MGP_LPJ_T0061960.1 MGP_LPJ_G0027411.1 mouse_genomes_project 3 91993857 91994780 + MGP_LPJ_P0061960 S100a4 protein_coding protein_coding MGP_LPJ_T0014093.1 MGP_LPJ_G0012184.1 mouse_genomes_project 3 78710919 78712483 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060835.1 MGP_LPJ_G0027182.1 mouse_genomes_project 3 58815262 58816454 - Gpr87 protein_coding retained_intron MGP_LPJ_T0060836.1 MGP_LPJ_G0027182.1 mouse_genomes_project 3 58815262 58831444 - MGP_LPJ_P0060836 Gpr87 protein_coding protein_coding MGP_LPJ_T0060837.1 MGP_LPJ_G0027182.1 mouse_genomes_project 3 58815345 58816425 - MGP_LPJ_P0060837 Gpr87 protein_coding protein_coding MGP_LPJ_T0099394.1 MGP_LPJ_G0037657.1 mouse_genomes_project 3 58601682 58601784 + Gm22491 snRNA snRNA MGP_LPJ_T0001297.1 MGP_LPJ_G0001217.1 mouse_genomes_project 3 97712963 97714733 + TEC TEC MGP_LPJ_T0014086.1 MGP_LPJ_G0012177.1 mouse_genomes_project 3 76542895 76543686 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014128.1 MGP_LPJ_G0012219.1 mouse_genomes_project 3 93684729 93685074 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100718.1 MGP_LPJ_G0038981.1 mouse_genomes_project 3 148364184 148364309 + Gm24728 snoRNA snoRNA MGP_LPJ_T0004315.1 MGP_LPJ_G0003790.1 mouse_genomes_project 3 97329210 97344655 - antisense antisense MGP_LPJ_T0004316.1 MGP_LPJ_G0003790.1 mouse_genomes_project 3 97329866 97344704 - antisense antisense MGP_LPJ_T0004317.1 MGP_LPJ_G0003790.1 mouse_genomes_project 3 97339326 97344714 - antisense antisense MGP_LPJ_T0063880.1 MGP_LPJ_G0027857.1 mouse_genomes_project 3 142904469 142941726 - MGP_LPJ_P0063880 Metap1 protein_coding protein_coding MGP_LPJ_T0063881.1 MGP_LPJ_G0027857.1 mouse_genomes_project 3 142905194 142914446 - MGP_LPJ_P0063881 Metap1 protein_coding protein_coding MGP_LPJ_T0063882.1 MGP_LPJ_G0027857.1 mouse_genomes_project 3 142911761 142920606 - Metap1 protein_coding retained_intron MGP_LPJ_T0063883.1 MGP_LPJ_G0027857.1 mouse_genomes_project 3 142911822 142920695 - Metap1 protein_coding retained_intron MGP_LPJ_T0063884.1 MGP_LPJ_G0027857.1 mouse_genomes_project 3 142914444 142927090 - Metap1 protein_coding processed_transcript MGP_LPJ_T0063885.1 MGP_LPJ_G0027857.1 mouse_genomes_project 3 142920950 142941610 - MGP_LPJ_P0063885 Metap1 protein_coding protein_coding MGP_LPJ_T0063886.1 MGP_LPJ_G0027857.1 mouse_genomes_project 3 142925560 142941580 - Metap1 protein_coding retained_intron MGP_LPJ_T0007503.1 MGP_LPJ_G0006150.1 mouse_genomes_project 3 32290935 32321683 - 4930431L21Rik lincRNA lincRNA MGP_LPJ_T0007504.1 MGP_LPJ_G0006150.1 mouse_genomes_project 3 32295096 32296064 - 4930431L21Rik lincRNA lincRNA MGP_LPJ_T0098249.1 MGP_LPJ_G0036530.1 mouse_genomes_project 3 69885628 69885742 + Gm25621 rRNA rRNA MGP_LPJ_T0010558.1 MGP_LPJ_G0008676.1 mouse_genomes_project 3 97815437 97815500 - Mir7014 miRNA miRNA MGP_LPJ_T0062212.1 MGP_LPJ_G0027503.1 mouse_genomes_project 3 97191303 97229163 - MGP_LPJ_P0062212 Gabpb2 protein_coding protein_coding MGP_LPJ_T0062213.1 MGP_LPJ_G0027503.1 mouse_genomes_project 3 97191303 97228956 - MGP_LPJ_P0062213 Gabpb2 protein_coding protein_coding MGP_LPJ_T0062214.1 MGP_LPJ_G0027503.1 mouse_genomes_project 3 97191310 97218568 - MGP_LPJ_P0062214 Gabpb2 protein_coding protein_coding MGP_LPJ_T0062215.1 MGP_LPJ_G0027503.1 mouse_genomes_project 3 97197178 97201450 - Gabpb2 protein_coding retained_intron MGP_LPJ_T0062216.1 MGP_LPJ_G0027503.1 mouse_genomes_project 3 97197314 97228956 - Gabpb2 protein_coding retained_intron MGP_LPJ_T0062217.1 MGP_LPJ_G0027503.1 mouse_genomes_project 3 97206986 97229163 - Gabpb2 protein_coding retained_intron MGP_LPJ_T0062218.1 MGP_LPJ_G0027503.1 mouse_genomes_project 3 97209135 97229163 - Gabpb2 protein_coding retained_intron MGP_LPJ_T0062219.1 MGP_LPJ_G0027503.1 mouse_genomes_project 3 97212570 97229001 - MGP_LPJ_P0062219 Gabpb2 protein_coding protein_coding MGP_LPJ_T0062220.1 MGP_LPJ_G0027503.1 mouse_genomes_project 3 97226374 97228941 - Gabpb2 protein_coding processed_transcript MGP_LPJ_T0014171.1 MGP_LPJ_G0012262.1 mouse_genomes_project 3 103456931 103457430 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017963.1 MGP_LPJ_G0015442.1 mouse_genomes_project 3 140175524 140187039 - processed_transcript macro_lncRNA MGP_LPJ_T0017964.1 MGP_LPJ_G0015442.1 mouse_genomes_project 3 140175626 140187039 - processed_transcript antisense MGP_LPJ_T0062535.1 MGP_LPJ_G0027573.1 mouse_genomes_project 3 100131379 100154385 + MGP_LPJ_P0062535 Sec22b protein_coding protein_coding MGP_LPJ_T0062536.1 MGP_LPJ_G0027573.1 mouse_genomes_project 3 100131405 100152031 + MGP_LPJ_P0062536 Sec22b protein_coding nonsense_mediated_decay MGP_LPJ_T0062537.1 MGP_LPJ_G0027573.1 mouse_genomes_project 3 100131414 100137854 + MGP_LPJ_P0062537 Sec22b protein_coding protein_coding MGP_LPJ_T0062538.1 MGP_LPJ_G0027573.1 mouse_genomes_project 3 100131416 100145397 + MGP_LPJ_P0062538 Sec22b protein_coding protein_coding MGP_LPJ_T0062539.1 MGP_LPJ_G0027573.1 mouse_genomes_project 3 100137143 100137854 + Sec22b protein_coding processed_transcript MGP_LPJ_T0062947.1 MGP_LPJ_G0027673.1 mouse_genomes_project 3 110224827 110233068 - MGP_LPJ_P0062947 Rbm15 protein_coding protein_coding MGP_LPJ_T0062948.1 MGP_LPJ_G0027673.1 mouse_genomes_project 3 110226537 110232496 - Rbm15 protein_coding retained_intron MGP_LPJ_T0099415.1 MGP_LPJ_G0037678.1 mouse_genomes_project 3 90233193 90233300 - Gm26465 snRNA snRNA MGP_LPJ_T0059910.1 MGP_LPJ_G0026999.1 mouse_genomes_project 3 7681556 7685168 - MGP_LPJ_P0059910 protein_coding protein_coding MGP_LPJ_T0059911.1 MGP_LPJ_G0026999.1 mouse_genomes_project 3 7681558 7685229 - MGP_LPJ_P0059911 protein_coding protein_coding MGP_LPJ_T0059912.1 MGP_LPJ_G0026999.1 mouse_genomes_project 3 7681561 7685168 - MGP_LPJ_P0059912 protein_coding protein_coding MGP_LPJ_T0061187.1 MGP_LPJ_G0027266.1 mouse_genomes_project 3 83702776 83714170 - MGP_LPJ_P0061187 Lrat protein_coding protein_coding MGP_LPJ_T0063408.1 MGP_LPJ_G0027770.1 mouse_genomes_project 3 126720838 126727110 - MGP_LPJ_P0063408 Gm10959 protein_coding protein_coding MGP_LPJ_T0061777.1 MGP_LPJ_G0027381.1 mouse_genomes_project 3 91051909 91070645 - MGP_LPJ_P0061777 Chrnb2 protein_coding protein_coding MGP_LPJ_T0061778.1 MGP_LPJ_G0027381.1 mouse_genomes_project 3 91058400 91069438 - Chrnb2 protein_coding processed_transcript MGP_LPJ_T0061779.1 MGP_LPJ_G0027381.1 mouse_genomes_project 3 91063136 91071805 - MGP_LPJ_P0061779 Chrnb2 protein_coding unknown_likely_coding MGP_LPJ_T0063659.1 MGP_LPJ_G0027812.1 mouse_genomes_project 3 135504095 135542778 - MGP_LPJ_P0063659 Hadh protein_coding protein_coding MGP_LPJ_T0063660.1 MGP_LPJ_G0027812.1 mouse_genomes_project 3 135515777 135542701 - Hadh protein_coding retained_intron MGP_LPJ_T0001407.1 MGP_LPJ_G0001326.1 mouse_genomes_project 3 157385859 157386974 + TEC TEC MGP_LPJ_T0007700.1 MGP_LPJ_G0006297.1 mouse_genomes_project 3 125445616 125446433 - Gm43607 lincRNA lincRNA MGP_LPJ_T0007682.1 MGP_LPJ_G0006285.1 mouse_genomes_project 3 119118384 119119960 + Gm9889 lincRNA pseudogene MGP_LPJ_T0007683.1 MGP_LPJ_G0006285.1 mouse_genomes_project 3 119118384 119119961 + Gm9889 lincRNA lincRNA MGP_LPJ_T0062525.1 MGP_LPJ_G0027571.1 mouse_genomes_project 3 99886413 99888077 - MGP_LPJ_P0062525 Gm17651 protein_coding protein_coding MGP_LPJ_T0001402.1 MGP_LPJ_G0001321.1 mouse_genomes_project 3 153438058 153438928 + TEC TEC MGP_LPJ_T0062767.1 MGP_LPJ_G0027628.1 mouse_genomes_project 3 106497072 106553995 + MGP_LPJ_P0062767 Ptpn22 protein_coding nonsense_mediated_decay MGP_LPJ_T0062768.1 MGP_LPJ_G0027628.1 mouse_genomes_project 3 106497201 106554008 + MGP_LPJ_P0062768 Ptpn22 protein_coding unknown_likely_coding MGP_LPJ_T0062769.1 MGP_LPJ_G0027628.1 mouse_genomes_project 3 106497832 106516511 + Ptpn22 protein_coding processed_transcript MGP_LPJ_T0062770.1 MGP_LPJ_G0027628.1 mouse_genomes_project 3 106517814 106519698 + Ptpn22 protein_coding retained_intron MGP_LPJ_T0062771.1 MGP_LPJ_G0027628.1 mouse_genomes_project 3 106526024 106530104 + Ptpn22 protein_coding retained_intron MGP_LPJ_T0062772.1 MGP_LPJ_G0027628.1 mouse_genomes_project 3 106526114 106545153 + Ptpn22 protein_coding processed_transcript MGP_LPJ_T0062773.1 MGP_LPJ_G0027628.1 mouse_genomes_project 3 106530604 106551209 + Ptpn22 protein_coding retained_intron MGP_LPJ_T0062774.1 MGP_LPJ_G0027628.1 mouse_genomes_project 3 106543805 106553997 + Ptpn22 protein_coding retained_intron MGP_LPJ_T0059977.1 MGP_LPJ_G0027021.1 mouse_genomes_project 3 13743153 13801324 - MGP_LPJ_P0059977 Gm5150 protein_coding protein_coding MGP_LPJ_T0059978.1 MGP_LPJ_G0027021.1 mouse_genomes_project 3 13744353 13801219 - MGP_LPJ_P0059978 Gm5150 protein_coding protein_coding MGP_LPJ_T0063290.1 MGP_LPJ_G0027748.1 mouse_genomes_project 3 120445042 120461607 + MGP_LPJ_P0063290 4930455H04Rik protein_coding protein_coding MGP_LPJ_T0007510.1 MGP_LPJ_G0006156.1 mouse_genomes_project 3 33018596 33025530 - Gm42695 lincRNA lincRNA MGP_LPJ_T0061318.1 MGP_LPJ_G0027300.1 mouse_genomes_project 3 88687722 88775547 + Arhgef11 protein_coding retained_intron MGP_LPJ_T0061319.1 MGP_LPJ_G0027300.1 mouse_genomes_project 3 88687738 88821206 + MGP_LPJ_P0061319 Arhgef11 protein_coding protein_coding MGP_LPJ_T0061320.1 MGP_LPJ_G0027300.1 mouse_genomes_project 3 88687748 88819082 + MGP_LPJ_P0061320 Arhgef11 protein_coding protein_coding MGP_LPJ_T0061321.1 MGP_LPJ_G0027300.1 mouse_genomes_project 3 88687755 88800590 + Arhgef11 protein_coding retained_intron MGP_LPJ_T0061322.1 MGP_LPJ_G0027300.1 mouse_genomes_project 3 88688264 88821207 + MGP_LPJ_P0061322 Arhgef11 protein_coding nonsense_mediated_decay MGP_LPJ_T0061323.1 MGP_LPJ_G0027300.1 mouse_genomes_project 3 88688940 88820275 + MGP_LPJ_P0061323 Arhgef11 protein_coding unknown_likely_coding MGP_LPJ_T0014060.1 MGP_LPJ_G0012151.1 mouse_genomes_project 3 68466744 68467325 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014272.1 MGP_LPJ_G0012363.1 mouse_genomes_project 3 136912132 136912520 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014131.1 MGP_LPJ_G0012222.1 mouse_genomes_project 3 94138496 94138800 - processed_pseudogene processed_pseudogene MGP_LPJ_T0062565.1 MGP_LPJ_G0027585.1 mouse_genomes_project 3 101213999 101223878 - MGP_LPJ_P0062565 Hsd3b6 protein_coding protein_coding MGP_LPJ_T0062566.1 MGP_LPJ_G0027585.1 mouse_genomes_project 3 101214000 101220511 - MGP_LPJ_P0062566 Hsd3b6 protein_coding protein_coding MGP_LPJ_T0062567.1 MGP_LPJ_G0027585.1 mouse_genomes_project 3 101215044 101223857 - Hsd3b6 protein_coding processed_transcript MGP_LPJ_T0061249.1 MGP_LPJ_G0027283.1 mouse_genomes_project 3 85732122 85899662 + MGP_LPJ_P0061249 Fbxw7 protein_coding protein_coding MGP_LPJ_T0061250.1 MGP_LPJ_G0027283.1 mouse_genomes_project 3 85732332 85898146 + Fbxw7 protein_coding retained_intron MGP_LPJ_T0061251.1 MGP_LPJ_G0027283.1 mouse_genomes_project 3 85782022 85899662 + MGP_LPJ_P0061251 Fbxw7 protein_coding protein_coding MGP_LPJ_T0061252.1 MGP_LPJ_G0027283.1 mouse_genomes_project 3 85845294 85899661 + MGP_LPJ_P0061252 Fbxw7 protein_coding protein_coding MGP_LPJ_T0061253.1 MGP_LPJ_G0027283.1 mouse_genomes_project 3 85872636 85898110 + MGP_LPJ_P0061253 Fbxw7 protein_coding protein_coding MGP_LPJ_T0007553.1 MGP_LPJ_G0006186.1 mouse_genomes_project 3 50598046 50606131 + Gm5103 lincRNA lincRNA MGP_LPJ_T0007554.1 MGP_LPJ_G0006186.1 mouse_genomes_project 3 50598098 50606138 + Gm5103 lincRNA lincRNA MGP_LPJ_T0001180.1 MGP_LPJ_G0001102.1 mouse_genomes_project 3 34372340 34372898 + TEC TEC MGP_LPJ_T0004380.1 MGP_LPJ_G0003827.1 mouse_genomes_project 3 126158833 126176354 - Gm42835 antisense antisense MGP_LPJ_T0100677.1 MGP_LPJ_G0038940.1 mouse_genomes_project 3 70459791 70459919 - Gm23477 snoRNA snoRNA MGP_LPJ_T0001228.1 MGP_LPJ_G0001149.1 mouse_genomes_project 3 51077018 51078039 - TEC TEC MGP_LPJ_T0062469.1 MGP_LPJ_G0027559.1 mouse_genomes_project 3 98902683 98971713 + MGP_LPJ_P0062469 Rnf115 protein_coding protein_coding MGP_LPJ_T0062470.1 MGP_LPJ_G0027559.1 mouse_genomes_project 3 98902691 98972199 + MGP_LPJ_P0062470 Rnf115 protein_coding nonsense_mediated_decay MGP_LPJ_T0062471.1 MGP_LPJ_G0027559.1 mouse_genomes_project 3 98902858 98964268 + Rnf115 protein_coding processed_transcript MGP_LPJ_T0014326.1 MGP_LPJ_G0012417.1 mouse_genomes_project 3 151724524 151725203 + processed_pseudogene processed_pseudogene MGP_LPJ_T0060651.1 MGP_LPJ_G0027143.1 mouse_genomes_project 3 52772673 52787387 - MGP_LPJ_P0060651 Nhlrc3 protein_coding protein_coding MGP_LPJ_T0060652.1 MGP_LPJ_G0027143.1 mouse_genomes_project 3 52772678 52787378 - MGP_LPJ_P0060652 Nhlrc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0060653.1 MGP_LPJ_G0027143.1 mouse_genomes_project 3 52782424 52786038 - Nhlrc3 protein_coding retained_intron MGP_LPJ_T0060654.1 MGP_LPJ_G0027143.1 mouse_genomes_project 3 52782929 52787306 - Nhlrc3 protein_coding retained_intron MGP_LPJ_T0060655.1 MGP_LPJ_G0027143.1 mouse_genomes_project 3 52786117 52787352 - Nhlrc3 protein_coding retained_intron MGP_LPJ_T0001289.1 MGP_LPJ_G0001209.1 mouse_genomes_project 3 89136943 89139216 + TEC TEC MGP_LPJ_T0062407.1 MGP_LPJ_G0027538.1 mouse_genomes_project 3 98335993 98336713 + MGP_LPJ_P0062407 Hist2h2ab protein_coding protein_coding MGP_LPJ_T0017937.1 MGP_LPJ_G0015436.1 mouse_genomes_project 3 119296338 119302860 - A930005H10Rik processed_transcript antisense MGP_LPJ_T0017938.1 MGP_LPJ_G0015436.1 mouse_genomes_project 3 119296338 119302824 - A930005H10Rik processed_transcript antisense MGP_LPJ_T0017939.1 MGP_LPJ_G0015436.1 mouse_genomes_project 3 119296340 119302683 - A930005H10Rik processed_transcript antisense MGP_LPJ_T0017940.1 MGP_LPJ_G0015436.1 mouse_genomes_project 3 119296543 119302834 - A930005H10Rik processed_transcript antisense MGP_LPJ_T0017941.1 MGP_LPJ_G0015436.1 mouse_genomes_project 3 119300728 119302827 - A930005H10Rik processed_transcript retained_intron MGP_LPJ_T0017942.1 MGP_LPJ_G0015436.1 mouse_genomes_project 3 119300827 119302618 - A930005H10Rik processed_transcript retained_intron MGP_LPJ_T0017943.1 MGP_LPJ_G0015436.1 mouse_genomes_project 3 119302552 119302860 - A930005H10Rik processed_transcript processed_transcript MGP_LPJ_T0007794.1 MGP_LPJ_G0006373.1 mouse_genomes_project 3 157185640 157189976 + Gm43619 lincRNA lincRNA MGP_LPJ_T0010571.1 MGP_LPJ_G0008689.1 mouse_genomes_project 3 131586158 131586226 + Mir302c miRNA miRNA MGP_LPJ_T0004382.1 MGP_LPJ_G0003829.1 mouse_genomes_project 3 126355700 126365328 + Gm43569 antisense antisense MGP_LPJ_T0063337.1 MGP_LPJ_G0027756.1 mouse_genomes_project 3 124989502 125020185 + MGP_LPJ_P0063337 Alg14 protein_coding nonsense_mediated_decay MGP_LPJ_T0063338.1 MGP_LPJ_G0027756.1 mouse_genomes_project 3 124989552 125065722 + MGP_LPJ_P0063338 Alg14 protein_coding protein_coding MGP_LPJ_T0063339.1 MGP_LPJ_G0027756.1 mouse_genomes_project 3 124989594 125020647 + MGP_LPJ_P0063339 Alg14 protein_coding protein_coding MGP_LPJ_T0062006.1 MGP_LPJ_G0027446.1 mouse_genomes_project 3 94377301 94378945 - MGP_LPJ_P0062006 Lce1e protein_coding protein_coding MGP_LPJ_T0001153.1 MGP_LPJ_G0001075.1 mouse_genomes_project 3 20676407 20676658 + TEC TEC MGP_LPJ_T0007635.1 MGP_LPJ_G0006244.1 mouse_genomes_project 3 94525880 94526267 - Gm38201 lincRNA lincRNA MGP_LPJ_T0099434.1 MGP_LPJ_G0037697.1 mouse_genomes_project 3 107427318 107427408 + Gm24223 snRNA snRNA MGP_LPJ_T0001392.1 MGP_LPJ_G0001311.1 mouse_genomes_project 3 140206948 140209198 + TEC TEC MGP_LPJ_T0062789.1 MGP_LPJ_G0027631.1 mouse_genomes_project 3 106654088 106869112 - MGP_LPJ_P0062789 Magi3 protein_coding protein_coding MGP_LPJ_T0062790.1 MGP_LPJ_G0027631.1 mouse_genomes_project 3 106654509 106868841 - MGP_LPJ_P0062790 Magi3 protein_coding protein_coding MGP_LPJ_T0062791.1 MGP_LPJ_G0027631.1 mouse_genomes_project 3 106657353 106868976 - MGP_LPJ_P0062791 Magi3 protein_coding protein_coding MGP_LPJ_T0062792.1 MGP_LPJ_G0027631.1 mouse_genomes_project 3 106702962 106704767 - Magi3 protein_coding retained_intron MGP_LPJ_T0100666.1 MGP_LPJ_G0038929.1 mouse_genomes_project 3 46214701 46214839 + Gm23891 snoRNA snoRNA MGP_LPJ_T0001151.1 MGP_LPJ_G0001073.1 mouse_genomes_project 3 18279919 18280165 + TEC TEC MGP_LPJ_T0010540.1 MGP_LPJ_G0008658.1 mouse_genomes_project 3 81435576 81435687 - Gm25749 miRNA miRNA MGP_LPJ_T0014160.1 MGP_LPJ_G0012251.1 mouse_genomes_project 3 101266121 101266307 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099378.1 MGP_LPJ_G0037641.1 mouse_genomes_project 3 17408329 17408493 + Gm23330 snRNA snRNA MGP_LPJ_T0014090.1 MGP_LPJ_G0012181.1 mouse_genomes_project 3 78485111 78485483 - processed_pseudogene processed_pseudogene MGP_LPJ_T0062618.1 MGP_LPJ_G0027600.1 mouse_genomes_project 3 103795899 103810515 - MGP_LPJ_P0062618 Cd2 protein_coding protein_coding MGP_LPJ_T0062619.1 MGP_LPJ_G0027600.1 mouse_genomes_project 3 103795908 103803120 - Cd2 protein_coding retained_intron MGP_LPJ_T0062620.1 MGP_LPJ_G0027600.1 mouse_genomes_project 3 103805651 103810455 - Cd2 protein_coding retained_intron MGP_LPJ_T0014019.1 MGP_LPJ_G0012110.1 mouse_genomes_project 3 57533084 57534263 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001284.1 MGP_LPJ_G0001204.1 mouse_genomes_project 3 80840165 80842490 + TEC TEC MGP_LPJ_T0061983.1 MGP_LPJ_G0027426.1 mouse_genomes_project 3 94014659 94015966 + MGP_LPJ_P0061983 Sprr2e protein_coding protein_coding MGP_LPJ_T0001305.1 MGP_LPJ_G0001225.1 mouse_genomes_project 3 99613884 99614847 + TEC TEC MGP_LPJ_T0017968.1 MGP_LPJ_G0015446.1 mouse_genomes_project 3 159659470 159662877 + AI606473 processed_transcript lincRNA MGP_LPJ_T0017969.1 MGP_LPJ_G0015446.1 mouse_genomes_project 3 159660620 159661422 + AI606473 processed_transcript retained_intron MGP_LPJ_T0063003.1 MGP_LPJ_G0027687.1 mouse_genomes_project 3 110930448 110935537 - MGP_LPJ_P0063003 protein_coding protein_coding MGP_LPJ_T0063004.1 MGP_LPJ_G0027687.1 mouse_genomes_project 3 110930693 110935444 - MGP_LPJ_P0063004 protein_coding protein_coding MGP_LPJ_T0063005.1 MGP_LPJ_G0027687.1 mouse_genomes_project 3 110934144 110935505 - protein_coding retained_intron MGP_LPJ_T0063006.1 MGP_LPJ_G0027687.1 mouse_genomes_project 3 110934565 110935505 - protein_coding retained_intron MGP_LPJ_T0061507.1 MGP_LPJ_G0027338.1 mouse_genomes_project 3 89733202 89750650 + MGP_LPJ_P0061507 Ubqln4 protein_coding protein_coding MGP_LPJ_T0061508.1 MGP_LPJ_G0027338.1 mouse_genomes_project 3 89733208 89744485 + Ubqln4 protein_coding retained_intron MGP_LPJ_T0061509.1 MGP_LPJ_G0027338.1 mouse_genomes_project 3 89733240 89737726 + MGP_LPJ_P0061509 Ubqln4 protein_coding nonsense_mediated_decay MGP_LPJ_T0061510.1 MGP_LPJ_G0027338.1 mouse_genomes_project 3 89737590 89745439 + Ubqln4 protein_coding processed_transcript MGP_LPJ_T0061511.1 MGP_LPJ_G0027338.1 mouse_genomes_project 3 89744831 89746199 + Ubqln4 protein_coding retained_intron MGP_LPJ_T0062992.1 MGP_LPJ_G0027684.1 mouse_genomes_project 3 110867242 110872726 - MGP_LPJ_P0062992 Gstm7 protein_coding protein_coding MGP_LPJ_T0062993.1 MGP_LPJ_G0027684.1 mouse_genomes_project 3 110867615 110872576 - MGP_LPJ_P0062993 Gstm7 protein_coding protein_coding MGP_LPJ_T0062994.1 MGP_LPJ_G0027684.1 mouse_genomes_project 3 110867718 110872523 - MGP_LPJ_P0062994 Gstm7 protein_coding protein_coding MGP_LPJ_T0062995.1 MGP_LPJ_G0027684.1 mouse_genomes_project 3 110869971 110872488 - MGP_LPJ_P0062995 Gstm7 protein_coding protein_coding MGP_LPJ_T0062996.1 MGP_LPJ_G0027684.1 mouse_genomes_project 3 110870040 110872519 - MGP_LPJ_P0062996 Gstm7 protein_coding protein_coding MGP_LPJ_T0013975.1 MGP_LPJ_G0012066.1 mouse_genomes_project 3 42576878 42577407 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007709.1 MGP_LPJ_G0006304.1 mouse_genomes_project 3 131994331 132033373 + 9830132P13Rik lincRNA lincRNA MGP_LPJ_T0099452.1 MGP_LPJ_G0037715.1 mouse_genomes_project 3 150975634 150975787 - Gm25627 snRNA snRNA MGP_LPJ_T0062195.1 MGP_LPJ_G0027500.1 mouse_genomes_project 3 97121120 97130414 + MGP_LPJ_P0062195 protein_coding protein_coding MGP_LPJ_T0007528.1 MGP_LPJ_G0006169.1 mouse_genomes_project 3 36776649 36808234 - Gm43821 lincRNA lincRNA MGP_LPJ_T0007649.1 MGP_LPJ_G0006257.1 mouse_genomes_project 3 100161282 100202145 + Gm5544 lincRNA lincRNA MGP_LPJ_T0014186.1 MGP_LPJ_G0012277.1 mouse_genomes_project 3 106776221 106777059 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001275.1 MGP_LPJ_G0001195.1 mouse_genomes_project 3 75512584 75514803 - TEC TEC MGP_LPJ_T0007629.1 MGP_LPJ_G0006240.1 mouse_genomes_project 3 91073327 91079057 - 4632404H12Rik lincRNA lincRNA MGP_LPJ_T0007630.1 MGP_LPJ_G0006240.1 mouse_genomes_project 3 91073937 91078608 - 4632404H12Rik lincRNA lincRNA MGP_LPJ_T0062009.1 MGP_LPJ_G0027449.1 mouse_genomes_project 3 94428666 94432934 - MGP_LPJ_P0062009 protein_coding protein_coding MGP_LPJ_T0001408.1 MGP_LPJ_G0001327.1 mouse_genomes_project 3 157477857 157481698 - TEC TEC MGP_LPJ_T0063845.1 MGP_LPJ_G0027847.1 mouse_genomes_project 3 142490569 142509960 - MGP_LPJ_P0063845 Gm5105 protein_coding protein_coding MGP_LPJ_T0007690.1 MGP_LPJ_G0006292.1 mouse_genomes_project 3 121532108 121536620 + 4921521D15Rik lincRNA lincRNA MGP_LPJ_T0061780.1 MGP_LPJ_G0027382.1 mouse_genomes_project 3 91079528 91089825 + MGP_LPJ_P0061780 Ube2q1 protein_coding protein_coding MGP_LPJ_T0061781.1 MGP_LPJ_G0027382.1 mouse_genomes_project 3 91079676 91083236 + Ube2q1 protein_coding retained_intron MGP_LPJ_T0099400.1 MGP_LPJ_G0037663.1 mouse_genomes_project 3 65816745 65816852 - Gm25755 snRNA snRNA MGP_LPJ_T0013856.1 MGP_LPJ_G0011947.1 mouse_genomes_project 3 3439003 3439419 - processed_pseudogene processed_pseudogene MGP_LPJ_T0062805.1 MGP_LPJ_G0027635.1 mouse_genomes_project 3 107484058 107489020 + MGP_LPJ_P0062805 Ppm1j protein_coding protein_coding MGP_LPJ_T0062806.1 MGP_LPJ_G0027635.1 mouse_genomes_project 3 107488610 107489020 + Ppm1j protein_coding retained_intron MGP_LPJ_T0102114.1 MGP_LPJ_G0040151.1 mouse_genomes_project 3 100927095 100948305 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0007747.1 MGP_LPJ_G0006338.1 mouse_genomes_project 3 147530564 147540623 + 9530052C20Rik lincRNA lincRNA MGP_LPJ_T0100680.1 MGP_LPJ_G0038943.1 mouse_genomes_project 3 79613189 79613321 + Gm23440 snoRNA snoRNA MGP_LPJ_T0014214.1 MGP_LPJ_G0012305.1 mouse_genomes_project 3 115565130 115565995 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014190.1 MGP_LPJ_G0012281.1 mouse_genomes_project 3 108750859 108758438 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014183.1 MGP_LPJ_G0012274.1 mouse_genomes_project 3 105832774 105833063 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001385.1 MGP_LPJ_G0001304.1 mouse_genomes_project 3 137073676 137076899 + TEC TEC MGP_LPJ_T0007516.1 MGP_LPJ_G0006161.1 mouse_genomes_project 3 34116604 34183634 - Gm6639 lincRNA lincRNA MGP_LPJ_T0007517.1 MGP_LPJ_G0006161.1 mouse_genomes_project 3 34130481 34183482 - Gm6639 lincRNA lincRNA MGP_LPJ_T0007518.1 MGP_LPJ_G0006161.1 mouse_genomes_project 3 34130672 34141670 - Gm6639 lincRNA lincRNA MGP_LPJ_T0007519.1 MGP_LPJ_G0006161.1 mouse_genomes_project 3 34140809 34155764 - Gm6639 lincRNA lincRNA MGP_LPJ_T0062011.1 MGP_LPJ_G0027451.1 mouse_genomes_project 3 94475313 94476958 - MGP_LPJ_P0062011 Lce1j protein_coding protein_coding MGP_LPJ_T0062012.1 MGP_LPJ_G0027451.1 mouse_genomes_project 3 94475523 94475913 - MGP_LPJ_P0062012 Lce1j protein_coding protein_coding MGP_LPJ_T0062007.1 MGP_LPJ_G0027447.1 mouse_genomes_project 3 94391126 94393254 - MGP_LPJ_P0062007 Lce1f protein_coding protein_coding MGP_LPJ_T0062762.1 MGP_LPJ_G0027627.1 mouse_genomes_project 3 106467314 106473744 + MGP_LPJ_P0062762 Bcl2l15 protein_coding protein_coding MGP_LPJ_T0062763.1 MGP_LPJ_G0027627.1 mouse_genomes_project 3 106467484 106491905 + MGP_LPJ_P0062763 Bcl2l15 protein_coding protein_coding MGP_LPJ_T0062764.1 MGP_LPJ_G0027627.1 mouse_genomes_project 3 106467545 106482502 + MGP_LPJ_P0062764 Bcl2l15 protein_coding unknown_likely_coding MGP_LPJ_T0062765.1 MGP_LPJ_G0027627.1 mouse_genomes_project 3 106484179 106491113 + Bcl2l15 protein_coding processed_transcript MGP_LPJ_T0062766.1 MGP_LPJ_G0027627.1 mouse_genomes_project 3 106489251 106490946 + Bcl2l15 protein_coding processed_transcript MGP_LPJ_T0060720.1 MGP_LPJ_G0027157.1 mouse_genomes_project 3 54476075 54481245 - MGP_LPJ_P0060720 Ccna1 protein_coding protein_coding MGP_LPJ_T0060721.1 MGP_LPJ_G0027157.1 mouse_genomes_project 3 54476081 54485662 - MGP_LPJ_P0060721 Ccna1 protein_coding protein_coding MGP_LPJ_T0060722.1 MGP_LPJ_G0027157.1 mouse_genomes_project 3 54476083 54485649 - MGP_LPJ_P0060722 Ccna1 protein_coding protein_coding MGP_LPJ_T0060723.1 MGP_LPJ_G0027157.1 mouse_genomes_project 3 54476084 54486108 - MGP_LPJ_P0060723 Ccna1 protein_coding protein_coding MGP_LPJ_T0060724.1 MGP_LPJ_G0027157.1 mouse_genomes_project 3 54481192 54486089 - MGP_LPJ_P0060724 Ccna1 protein_coding protein_coding MGP_LPJ_T0060725.1 MGP_LPJ_G0027157.1 mouse_genomes_project 3 54481586 54485644 - MGP_LPJ_P0060725 Ccna1 protein_coding protein_coding MGP_LPJ_T0004375.1 MGP_LPJ_G0003824.1 mouse_genomes_project 3 120080841 120082669 - Gm42893 antisense antisense MGP_LPJ_T0059915.1 MGP_LPJ_G0027001.1 mouse_genomes_project 3 7735090 7795455 - MGP_LPJ_P0059915 Fabp12 protein_coding protein_coding MGP_LPJ_T0059916.1 MGP_LPJ_G0027001.1 mouse_genomes_project 3 7736799 7746177 - MGP_LPJ_P0059916 Fabp12 protein_coding protein_coding MGP_LPJ_T0059917.1 MGP_LPJ_G0027001.1 mouse_genomes_project 3 7736799 7746150 - MGP_LPJ_P0059917 Fabp12 protein_coding protein_coding MGP_LPJ_T0059918.1 MGP_LPJ_G0027001.1 mouse_genomes_project 3 7736832 7795446 - MGP_LPJ_P0059918 Fabp12 protein_coding protein_coding MGP_LPJ_T0013991.1 MGP_LPJ_G0012082.1 mouse_genomes_project 3 48864115 48864650 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014049.1 MGP_LPJ_G0012140.1 mouse_genomes_project 3 66089847 66090676 - processed_pseudogene processed_pseudogene MGP_LPJ_T0063250.1 MGP_LPJ_G0027741.1 mouse_genomes_project 3 120041652 120073458 + MGP_LPJ_P0063250 Sass6 protein_coding protein_coding MGP_LPJ_T0063251.1 MGP_LPJ_G0027741.1 mouse_genomes_project 3 120041673 120055284 + Sass6 protein_coding processed_transcript MGP_LPJ_T0063252.1 MGP_LPJ_G0027741.1 mouse_genomes_project 3 120041682 120082689 + MGP_LPJ_P0063252 Sass6 protein_coding nonsense_mediated_decay MGP_LPJ_T0063253.1 MGP_LPJ_G0027741.1 mouse_genomes_project 3 120041784 120080487 + MGP_LPJ_P0063253 Sass6 protein_coding protein_coding MGP_LPJ_T0063255.1 MGP_LPJ_G0027741.1 mouse_genomes_project 3 120065195 120071111 + Sass6 protein_coding processed_transcript MGP_LPJ_T0063257.1 MGP_LPJ_G0027741.1 mouse_genomes_project 3 120073314 120079239 + Sass6 protein_coding retained_intron MGP_LPJ_T0063258.1 MGP_LPJ_G0027741.1 mouse_genomes_project 3 120077621 120080805 + Sass6 protein_coding retained_intron MGP_LPJ_T0007708.1 MGP_LPJ_G0006303.1 mouse_genomes_project 3 131934587 131938264 + Gm42586 lincRNA lincRNA MGP_LPJ_T0007533.1 MGP_LPJ_G0006173.1 mouse_genomes_project 3 37327516 37328824 + Gm43538 lincRNA lincRNA MGP_LPJ_T0099384.1 MGP_LPJ_G0037647.1 mouse_genomes_project 3 44765492 44765655 + Gm25796 snRNA snRNA MGP_LPJ_T0100717.1 MGP_LPJ_G0038980.1 mouse_genomes_project 3 147436907 147437000 + Gm25965 snoRNA snoRNA MGP_LPJ_T0014005.1 MGP_LPJ_G0012096.1 mouse_genomes_project 3 52669558 52670296 - processed_pseudogene processed_pseudogene MGP_LPJ_T0061723.1 MGP_LPJ_G0027369.1 mouse_genomes_project 3 90639423 90654335 - MGP_LPJ_P0061723 Dcst1 protein_coding protein_coding MGP_LPJ_T0061724.1 MGP_LPJ_G0027369.1 mouse_genomes_project 3 90640227 90644722 - Dcst1 protein_coding retained_intron MGP_LPJ_T0061725.1 MGP_LPJ_G0027369.1 mouse_genomes_project 3 90641896 90644692 - Dcst1 protein_coding processed_transcript MGP_LPJ_T0061726.1 MGP_LPJ_G0027369.1 mouse_genomes_project 3 90642804 90644074 - Dcst1 protein_coding retained_intron MGP_LPJ_T0061727.1 MGP_LPJ_G0027369.1 mouse_genomes_project 3 90646683 90653344 - Dcst1 protein_coding retained_intron MGP_LPJ_T0061728.1 MGP_LPJ_G0027369.1 mouse_genomes_project 3 90646768 90653345 - Dcst1 protein_coding retained_intron MGP_LPJ_T0014233.1 MGP_LPJ_G0012324.1 mouse_genomes_project 3 120708743 120709386 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010572.1 MGP_LPJ_G0008690.1 mouse_genomes_project 3 131586291 131586360 + Mir302a miRNA miRNA MGP_LPJ_T0099397.1 MGP_LPJ_G0037660.1 mouse_genomes_project 3 63364173 63364279 + Gm24946 snRNA snRNA MGP_LPJ_T0014311.1 MGP_LPJ_G0012402.1 mouse_genomes_project 3 145206774 145207027 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013936.1 MGP_LPJ_G0012027.1 mouse_genomes_project 3 28734180 28734652 - processed_pseudogene processed_pseudogene MGP_LPJ_T0062128.1 MGP_LPJ_G0027491.1 mouse_genomes_project 3 96920895 96927667 + MGP_LPJ_P0062128 Rfx5 protein_coding protein_coding MGP_LPJ_T0062129.1 MGP_LPJ_G0027491.1 mouse_genomes_project 3 96920928 96929732 + MGP_LPJ_P0062129 Rfx5 protein_coding protein_coding MGP_LPJ_T0062130.1 MGP_LPJ_G0027491.1 mouse_genomes_project 3 96920928 96924700 + MGP_LPJ_P0062130 Rfx5 protein_coding protein_coding MGP_LPJ_T0062131.1 MGP_LPJ_G0027491.1 mouse_genomes_project 3 96920929 96924484 + MGP_LPJ_P0062131 Rfx5 protein_coding protein_coding MGP_LPJ_T0062132.1 MGP_LPJ_G0027491.1 mouse_genomes_project 3 96920955 96929520 + MGP_LPJ_P0062132 Rfx5 protein_coding nonsense_mediated_decay MGP_LPJ_T0062133.1 MGP_LPJ_G0027491.1 mouse_genomes_project 3 96920980 96923874 + Rfx5 protein_coding processed_transcript MGP_LPJ_T0062134.1 MGP_LPJ_G0027491.1 mouse_genomes_project 3 96920980 96925319 + MGP_LPJ_P0062134 Rfx5 protein_coding nonsense_mediated_decay MGP_LPJ_T0062135.1 MGP_LPJ_G0027491.1 mouse_genomes_project 3 96920990 96929520 + MGP_LPJ_P0062135 Rfx5 protein_coding protein_coding MGP_LPJ_T0062136.1 MGP_LPJ_G0027491.1 mouse_genomes_project 3 96921015 96924562 + MGP_LPJ_P0062136 Rfx5 protein_coding nonsense_mediated_decay MGP_LPJ_T0062137.1 MGP_LPJ_G0027491.1 mouse_genomes_project 3 96921021 96929517 + Rfx5 protein_coding retained_intron MGP_LPJ_T0062138.1 MGP_LPJ_G0027491.1 mouse_genomes_project 3 96921046 96929520 + MGP_LPJ_P0062138 Rfx5 protein_coding protein_coding MGP_LPJ_T0062139.1 MGP_LPJ_G0027491.1 mouse_genomes_project 3 96921204 96924966 + MGP_LPJ_P0062139 Rfx5 protein_coding protein_coding MGP_LPJ_T0062140.1 MGP_LPJ_G0027491.1 mouse_genomes_project 3 96921298 96924498 + MGP_LPJ_P0062140 Rfx5 protein_coding protein_coding MGP_LPJ_T0062141.1 MGP_LPJ_G0027491.1 mouse_genomes_project 3 96921347 96924529 + MGP_LPJ_P0062141 Rfx5 protein_coding protein_coding MGP_LPJ_T0062142.1 MGP_LPJ_G0027491.1 mouse_genomes_project 3 96922933 96927777 + MGP_LPJ_P0062142 Rfx5 protein_coding protein_coding MGP_LPJ_T0062143.1 MGP_LPJ_G0027491.1 mouse_genomes_project 3 96923185 96929732 + MGP_LPJ_P0062143 Rfx5 protein_coding protein_coding MGP_LPJ_T0062144.1 MGP_LPJ_G0027491.1 mouse_genomes_project 3 96923641 96924973 + Rfx5 protein_coding retained_intron MGP_LPJ_T0061987.1 MGP_LPJ_G0027429.1 mouse_genomes_project 3 94071133 94072414 + MGP_LPJ_P0061987 Sprr2i protein_coding protein_coding MGP_LPJ_T0060988.1 MGP_LPJ_G0027218.1 mouse_genomes_project 3 67558106 67604318 - MGP_LPJ_P0060988 Rarres1 protein_coding protein_coding MGP_LPJ_T0007662.1 MGP_LPJ_G0006268.1 mouse_genomes_project 3 105174067 105176288 + Gm42678 lincRNA lincRNA MGP_LPJ_T0063241.1 MGP_LPJ_G0027740.1 mouse_genomes_project 3 120027761 120066440 - MGP_LPJ_P0063241 Trmt13 protein_coding protein_coding MGP_LPJ_T0063242.1 MGP_LPJ_G0027740.1 mouse_genomes_project 3 120027762 120041507 - MGP_LPJ_P0063242 Trmt13 protein_coding nonsense_mediated_decay MGP_LPJ_T0063243.1 MGP_LPJ_G0027740.1 mouse_genomes_project 3 120027763 120041531 - MGP_LPJ_P0063243 Trmt13 protein_coding nonsense_mediated_decay MGP_LPJ_T0063244.1 MGP_LPJ_G0027740.1 mouse_genomes_project 3 120028004 120030145 - Trmt13 protein_coding processed_transcript MGP_LPJ_T0063245.1 MGP_LPJ_G0027740.1 mouse_genomes_project 3 120030792 120041558 - Trmt13 protein_coding retained_intron MGP_LPJ_T0063246.1 MGP_LPJ_G0027740.1 mouse_genomes_project 3 120032480 120041356 - MGP_LPJ_P0063246 Trmt13 protein_coding protein_coding MGP_LPJ_T0063247.1 MGP_LPJ_G0027740.1 mouse_genomes_project 3 120036236 120041339 - MGP_LPJ_P0063247 Trmt13 protein_coding nonsense_mediated_decay MGP_LPJ_T0063248.1 MGP_LPJ_G0027740.1 mouse_genomes_project 3 120038656 120041472 - Trmt13 protein_coding retained_intron MGP_LPJ_T0063249.1 MGP_LPJ_G0027740.1 mouse_genomes_project 3 120040629 120041509 - MGP_LPJ_P0063249 Trmt13 protein_coding protein_coding MGP_LPJ_T0063254.1 MGP_LPJ_G0027740.1 mouse_genomes_project 3 120042064 120065974 - Trmt13 protein_coding processed_transcript MGP_LPJ_T0063256.1 MGP_LPJ_G0027740.1 mouse_genomes_project 3 120065392 120066261 - Trmt13 protein_coding retained_intron MGP_LPJ_T0063791.1 MGP_LPJ_G0027836.1 mouse_genomes_project 3 140167117 140234768 + MGP_LPJ_P0063791 Slc39a8 protein_coding protein_coding MGP_LPJ_T0063792.1 MGP_LPJ_G0027836.1 mouse_genomes_project 3 140167492 140206379 + Slc39a8 protein_coding retained_intron MGP_LPJ_T0063793.1 MGP_LPJ_G0027836.1 mouse_genomes_project 3 140167495 140234948 + MGP_LPJ_P0063793 Slc39a8 protein_coding protein_coding MGP_LPJ_T0063794.1 MGP_LPJ_G0027836.1 mouse_genomes_project 3 140167614 140234946 + MGP_LPJ_P0063794 Slc39a8 protein_coding protein_coding MGP_LPJ_T0063795.1 MGP_LPJ_G0027836.1 mouse_genomes_project 3 140167914 140234760 + MGP_LPJ_P0063795 Slc39a8 protein_coding protein_coding MGP_LPJ_T0063796.1 MGP_LPJ_G0027836.1 mouse_genomes_project 3 140230566 140234942 + Slc39a8 protein_coding retained_intron MGP_LPJ_T0063380.1 MGP_LPJ_G0027764.1 mouse_genomes_project 3 126011094 126034260 + MGP_LPJ_P0063380 Gclm protein_coding protein_coding MGP_LPJ_T0063381.1 MGP_LPJ_G0027764.1 mouse_genomes_project 3 126011096 126030639 + MGP_LPJ_P0063381 Gclm protein_coding protein_coding MGP_LPJ_T0063382.1 MGP_LPJ_G0027764.1 mouse_genomes_project 3 126011189 126033094 + MGP_LPJ_P0063382 Gclm protein_coding protein_coding MGP_LPJ_T0063383.1 MGP_LPJ_G0027764.1 mouse_genomes_project 3 126029801 126034118 + Gclm protein_coding retained_intron MGP_LPJ_T0004406.1 MGP_LPJ_G0003847.1 mouse_genomes_project 3 142290409 142292191 - Gm43403 antisense antisense MGP_LPJ_T0004407.1 MGP_LPJ_G0003847.1 mouse_genomes_project 3 142291504 142292001 - Gm43403 antisense antisense MGP_LPJ_T0062961.1 MGP_LPJ_G0027677.1 mouse_genomes_project 3 110522026 110532673 + MGP_LPJ_P0062961 Alx3 protein_coding protein_coding MGP_LPJ_T0061988.1 MGP_LPJ_G0027430.1 mouse_genomes_project 3 94081222 94082537 + MGP_LPJ_P0061988 Sprr2j-ps protein_coding protein_coding MGP_LPJ_T0014009.1 MGP_LPJ_G0012100.1 mouse_genomes_project 3 56316303 56316774 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099376.1 MGP_LPJ_G0037639.1 mouse_genomes_project 3 15597104 15597231 - Gm23441 snRNA snRNA MGP_LPJ_T0061958.1 MGP_LPJ_G0027410.1 mouse_genomes_project 3 91990841 91994832 + MGP_LPJ_P0061958 Gm42674 protein_coding nonsense_mediated_decay MGP_LPJ_T0061266.1 MGP_LPJ_G0027286.1 mouse_genomes_project 3 86827666 86845339 - MGP_LPJ_P0061266 Glt28d2 protein_coding protein_coding MGP_LPJ_T0013903.1 MGP_LPJ_G0011994.1 mouse_genomes_project 3 15007382 15007716 - processed_pseudogene processed_pseudogene MGP_LPJ_T0061803.1 MGP_LPJ_G0027386.1 mouse_genomes_project 3 91328308 91332172 - MGP_LPJ_P0061803 Hax1 protein_coding protein_coding MGP_LPJ_T0061804.1 MGP_LPJ_G0027386.1 mouse_genomes_project 3 91328315 91332141 - MGP_LPJ_P0061804 Hax1 protein_coding protein_coding MGP_LPJ_T0061805.1 MGP_LPJ_G0027386.1 mouse_genomes_project 3 91328318 91329427 - Hax1 protein_coding retained_intron MGP_LPJ_T0061806.1 MGP_LPJ_G0027386.1 mouse_genomes_project 3 91328318 91329745 - MGP_LPJ_P0061806 Hax1 protein_coding protein_coding MGP_LPJ_T0061807.1 MGP_LPJ_G0027386.1 mouse_genomes_project 3 91328318 91332152 - MGP_LPJ_P0061807 Hax1 protein_coding protein_coding MGP_LPJ_T0061808.1 MGP_LPJ_G0027386.1 mouse_genomes_project 3 91328319 91332161 - Hax1 protein_coding retained_intron MGP_LPJ_T0061809.1 MGP_LPJ_G0027386.1 mouse_genomes_project 3 91328456 91332095 - MGP_LPJ_P0061809 Hax1 protein_coding protein_coding MGP_LPJ_T0061810.1 MGP_LPJ_G0027386.1 mouse_genomes_project 3 91329002 91331864 - MGP_LPJ_P0061810 Hax1 protein_coding protein_coding MGP_LPJ_T0061811.1 MGP_LPJ_G0027386.1 mouse_genomes_project 3 91329086 91329811 - Hax1 protein_coding retained_intron MGP_LPJ_T0061812.1 MGP_LPJ_G0027386.1 mouse_genomes_project 3 91329367 91332155 - MGP_LPJ_P0061812 Hax1 protein_coding nonsense_mediated_decay MGP_LPJ_T0061813.1 MGP_LPJ_G0027386.1 mouse_genomes_project 3 91330994 91332255 - Hax1 protein_coding retained_intron MGP_LPJ_T0061814.1 MGP_LPJ_G0027386.1 mouse_genomes_project 3 91331244 91331837 - MGP_LPJ_P0061814 Hax1 protein_coding protein_coding MGP_LPJ_T0014265.1 MGP_LPJ_G0012356.1 mouse_genomes_project 3 134356706 134357299 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100726.1 MGP_LPJ_G0038989.1 mouse_genomes_project 3 159208524 159208604 - Snord45c snoRNA snoRNA MGP_LPJ_T0062424.1 MGP_LPJ_G0027548.1 mouse_genomes_project 3 98742226 98745508 - Polr3gl protein_coding retained_intron MGP_LPJ_T0062425.1 MGP_LPJ_G0027548.1 mouse_genomes_project 3 98742234 98743989 - Polr3gl protein_coding retained_intron MGP_LPJ_T0062426.1 MGP_LPJ_G0027548.1 mouse_genomes_project 3 98742334 98757984 - MGP_LPJ_P0062426 Polr3gl protein_coding protein_coding MGP_LPJ_T0004329.1 MGP_LPJ_G0003798.1 mouse_genomes_project 3 99012936 99015207 - 4930442L01Rik antisense antisense MGP_LPJ_T0001295.1 MGP_LPJ_G0001215.1 mouse_genomes_project 3 95133349 95134548 + TEC TEC MGP_LPJ_T0100721.1 MGP_LPJ_G0038984.1 mouse_genomes_project 3 158990750 158990866 + Gm22206 snoRNA snoRNA MGP_LPJ_T0007737.1 MGP_LPJ_G0006329.1 mouse_genomes_project 3 142119445 142127580 + Gm42610 lincRNA lincRNA MGP_LPJ_T0010518.1 MGP_LPJ_G0008636.1 mouse_genomes_project 3 24610664 24610791 - Gm25773 miRNA miRNA MGP_LPJ_T0100669.1 MGP_LPJ_G0038932.1 mouse_genomes_project 3 52844313 52844438 + Gm23675 snoRNA snoRNA MGP_LPJ_T0010547.1 MGP_LPJ_G0008665.1 mouse_genomes_project 3 89613264 89613337 - Mir7011 miRNA miRNA MGP_LPJ_T0007457.1 MGP_LPJ_G0006118.1 mouse_genomes_project 3 2814406 2816745 - 4930555M17Rik lincRNA lincRNA MGP_LPJ_T0001146.1 MGP_LPJ_G0001068.1 mouse_genomes_project 3 8301938 8303621 - TEC TEC MGP_LPJ_T0098548.1 MGP_LPJ_G0036822.1 mouse_genomes_project 3 103105241 103107362 - Gm42869 sense_intronic sense_intronic MGP_LPJ_T0100676.1 MGP_LPJ_G0038939.1 mouse_genomes_project 3 70175209 70175340 - Gm23484 snoRNA snoRNA MGP_LPJ_T0017915.1 MGP_LPJ_G0015425.1 mouse_genomes_project 3 96234783 96239120 - Gm36070 processed_transcript lincRNA MGP_LPJ_T0017916.1 MGP_LPJ_G0015425.1 mouse_genomes_project 3 96235602 96237490 - Gm36070 processed_transcript retained_intron MGP_LPJ_T0001417.1 MGP_LPJ_G0001336.1 mouse_genomes_project 3 159568579 159570559 - TEC TEC MGP_LPJ_T0013900.1 MGP_LPJ_G0011991.1 mouse_genomes_project 3 13691145 13692235 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013923.1 MGP_LPJ_G0012014.1 mouse_genomes_project 3 20233885 20236598 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099445.1 MGP_LPJ_G0037708.1 mouse_genomes_project 3 136788291 136788397 - Gm25307 snRNA snRNA MGP_LPJ_T0007689.1 MGP_LPJ_G0006291.1 mouse_genomes_project 3 120760902 120761591 + Gm42891 lincRNA lincRNA MGP_LPJ_T0013999.1 MGP_LPJ_G0012090.1 mouse_genomes_project 3 50624287 50624606 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060497.1 MGP_LPJ_G0027119.1 mouse_genomes_project 3 39524957 39562401 - MGP_LPJ_P0060497 Mfsd8 protein_coding protein_coding MGP_LPJ_T0060498.1 MGP_LPJ_G0027119.1 mouse_genomes_project 3 39526362 39562318 - MGP_LPJ_P0060498 Mfsd8 protein_coding nonsense_mediated_decay MGP_LPJ_T0060499.1 MGP_LPJ_G0027119.1 mouse_genomes_project 3 39526368 39562221 - MGP_LPJ_P0060499 Mfsd8 protein_coding unknown_likely_coding MGP_LPJ_T0060500.1 MGP_LPJ_G0027119.1 mouse_genomes_project 3 39526368 39609016 - MGP_LPJ_P0060500 Mfsd8 protein_coding unknown_likely_coding MGP_LPJ_T0060501.1 MGP_LPJ_G0027119.1 mouse_genomes_project 3 39533785 39562210 - MGP_LPJ_P0060501 Mfsd8 protein_coding nonsense_mediated_decay MGP_LPJ_T0060502.1 MGP_LPJ_G0027119.1 mouse_genomes_project 3 39534304 39537819 - Mfsd8 protein_coding retained_intron MGP_LPJ_T0060503.1 MGP_LPJ_G0027119.1 mouse_genomes_project 3 39538866 39562050 - MGP_LPJ_P0060503 Mfsd8 protein_coding protein_coding MGP_LPJ_T0060504.1 MGP_LPJ_G0027119.1 mouse_genomes_project 3 39545865 39562332 - MGP_LPJ_P0060504 Mfsd8 protein_coding protein_coding MGP_LPJ_T0060505.1 MGP_LPJ_G0027119.1 mouse_genomes_project 3 39558592 39562402 - Mfsd8 protein_coding retained_intron MGP_LPJ_T0001337.1 MGP_LPJ_G0001257.1 mouse_genomes_project 3 125520277 125521350 - TEC TEC MGP_LPJ_T0017951.1 MGP_LPJ_G0015439.1 mouse_genomes_project 3 126558811 126604427 - 4930447N08Rik processed_transcript antisense MGP_LPJ_T0017952.1 MGP_LPJ_G0015439.1 mouse_genomes_project 3 126566394 126604526 - 4930447N08Rik processed_transcript retained_intron MGP_LPJ_T0017953.1 MGP_LPJ_G0015439.1 mouse_genomes_project 3 126597546 126604372 - 4930447N08Rik processed_transcript processed_transcript MGP_LPJ_T0017954.1 MGP_LPJ_G0015439.1 mouse_genomes_project 3 126597553 126604459 - 4930447N08Rik processed_transcript antisense MGP_LPJ_T0060272.1 MGP_LPJ_G0027080.1 mouse_genomes_project 3 31115550 31126761 - MGP_LPJ_P0060272 Mrpl47 protein_coding protein_coding MGP_LPJ_T0060273.1 MGP_LPJ_G0027080.1 mouse_genomes_project 3 31117727 31122147 - Mrpl47 protein_coding processed_transcript MGP_LPJ_T0060274.1 MGP_LPJ_G0027080.1 mouse_genomes_project 3 31125714 31127257 - Mrpl47 protein_coding retained_intron MGP_LPJ_T0001190.1 MGP_LPJ_G0001112.1 mouse_genomes_project 3 36501021 36502136 + TEC TEC MGP_LPJ_T0014135.1 MGP_LPJ_G0012226.1 mouse_genomes_project 3 94890872 94891563 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062025.1 MGP_LPJ_G0027463.1 mouse_genomes_project 3 94728676 94729903 - MGP_LPJ_P0062025 Lce1m protein_coding protein_coding MGP_LPJ_T0062026.1 MGP_LPJ_G0027463.1 mouse_genomes_project 3 94729349 94729902 - MGP_LPJ_P0062026 Lce1m protein_coding protein_coding MGP_LPJ_T0001338.1 MGP_LPJ_G0001258.1 mouse_genomes_project 3 125778134 125781337 + TEC TEC MGP_LPJ_T0010525.1 MGP_LPJ_G0008643.1 mouse_genomes_project 3 31658939 31659044 - Gm27974 miRNA miRNA MGP_LPJ_T0098566.1 MGP_LPJ_G0036840.1 mouse_genomes_project 3 106699504 106700645 - Gm42696 sense_intronic sense_intronic MGP_LPJ_T0063455.1 MGP_LPJ_G0027779.1 mouse_genomes_project 3 128205335 128209224 + MGP_LPJ_P0063455 Tram1l1 protein_coding protein_coding MGP_LPJ_T0010561.1 MGP_LPJ_G0008679.1 mouse_genomes_project 3 106289393 106289479 - Gm25325 miRNA miRNA MGP_LPJ_T0059847.1 MGP_LPJ_G0026980.1 mouse_genomes_project 3 1932505 1946288 - MGP_LPJ_P0059847 protein_coding protein_coding MGP_LPJ_T0059848.1 MGP_LPJ_G0026980.1 mouse_genomes_project 3 1933630 1937038 - protein_coding retained_intron MGP_LPJ_T0059849.1 MGP_LPJ_G0026980.1 mouse_genomes_project 3 1933714 1934194 - protein_coding retained_intron MGP_LPJ_T0059851.1 MGP_LPJ_G0026980.1 mouse_genomes_project 3 1933911 1950513 - protein_coding processed_transcript MGP_LPJ_T0063908.1 MGP_LPJ_G0027861.1 mouse_genomes_project 3 143697998 144215815 + MGP_LPJ_P0063908 Stpg2 protein_coding protein_coding MGP_LPJ_T0063909.1 MGP_LPJ_G0027861.1 mouse_genomes_project 3 143698197 144216504 + MGP_LPJ_P0063909 Stpg2 protein_coding protein_coding MGP_LPJ_T0013894.1 MGP_LPJ_G0011985.1 mouse_genomes_project 3 12073531 12074010 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011545.1 MGP_LPJ_G0009663.1 mouse_genomes_project 3 11688088 11688369 - Gm22026 misc_RNA misc_RNA MGP_LPJ_T0013941.1 MGP_LPJ_G0012032.1 mouse_genomes_project 3 31602915 31603147 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062807.1 MGP_LPJ_G0027636.1 mouse_genomes_project 3 107493369 107498784 + MGP_LPJ_P0062807 Rhoc protein_coding protein_coding MGP_LPJ_T0062808.1 MGP_LPJ_G0027636.1 mouse_genomes_project 3 107493535 107497299 + MGP_LPJ_P0062808 Rhoc protein_coding protein_coding MGP_LPJ_T0062809.1 MGP_LPJ_G0027636.1 mouse_genomes_project 3 107496304 107497202 + Rhoc protein_coding retained_intron MGP_LPJ_T0001322.1 MGP_LPJ_G0001242.1 mouse_genomes_project 3 119985657 119986096 + TEC TEC MGP_LPJ_T0062008.1 MGP_LPJ_G0027448.1 mouse_genomes_project 3 94415026 94416502 - MGP_LPJ_P0062008 Gm38119 protein_coding protein_coding MGP_LPJ_T0100713.1 MGP_LPJ_G0038976.1 mouse_genomes_project 3 132650856 132650965 + Gm22293 snoRNA snoRNA MGP_LPJ_T0060584.1 MGP_LPJ_G0027130.1 mouse_genomes_project 3 49102242 49666973 - MGP_LPJ_P0060584 Slc7a11 protein_coding protein_coding MGP_LPJ_T0060585.1 MGP_LPJ_G0027130.1 mouse_genomes_project 3 49582611 49666970 - MGP_LPJ_P0060585 Slc7a11 protein_coding protein_coding MGP_LPJ_T0060586.1 MGP_LPJ_G0027130.1 mouse_genomes_project 3 49587522 49588473 - Slc7a11 protein_coding processed_transcript MGP_LPJ_T0060587.1 MGP_LPJ_G0027130.1 mouse_genomes_project 3 49637895 49666973 - Slc7a11 protein_coding retained_intron MGP_LPJ_T0060588.1 MGP_LPJ_G0027130.1 mouse_genomes_project 3 49664274 49666964 - Slc7a11 protein_coding retained_intron MGP_LPJ_T0013863.1 MGP_LPJ_G0011954.1 mouse_genomes_project 3 4742673 4742793 - processed_pseudogene processed_pseudogene MGP_LPJ_T0063600.1 MGP_LPJ_G0027800.1 mouse_genomes_project 3 134012778 134019311 - MGP_LPJ_P0063600 Gar1 protein_coding protein_coding MGP_LPJ_T0063601.1 MGP_LPJ_G0027800.1 mouse_genomes_project 3 134012782 134017287 - MGP_LPJ_P0063601 Gar1 protein_coding protein_coding MGP_LPJ_T0063602.1 MGP_LPJ_G0027800.1 mouse_genomes_project 3 134012785 134013535 - Gar1 protein_coding retained_intron MGP_LPJ_T0063603.1 MGP_LPJ_G0027800.1 mouse_genomes_project 3 134013412 134015147 - Gar1 protein_coding retained_intron MGP_LPJ_T0063604.1 MGP_LPJ_G0027800.1 mouse_genomes_project 3 134013431 134019275 - Gar1 protein_coding processed_transcript MGP_LPJ_T0063605.1 MGP_LPJ_G0027800.1 mouse_genomes_project 3 134014708 134018848 - MGP_LPJ_P0063605 Gar1 protein_coding protein_coding MGP_LPJ_T0100670.1 MGP_LPJ_G0038933.1 mouse_genomes_project 3 55415262 55415394 - Gm22784 snoRNA snoRNA MGP_LPJ_T0062571.1 MGP_LPJ_G0027588.1 mouse_genomes_project 3 101574362 101658006 + MGP_LPJ_P0062571 Wars2 protein_coding unknown_likely_coding MGP_LPJ_T0062572.1 MGP_LPJ_G0027588.1 mouse_genomes_project 3 101574400 101656909 + MGP_LPJ_P0062572 Wars2 protein_coding protein_coding MGP_LPJ_T0062573.1 MGP_LPJ_G0027588.1 mouse_genomes_project 3 101574425 101682366 + MGP_LPJ_P0062573 Wars2 protein_coding nonsense_mediated_decay MGP_LPJ_T0062574.1 MGP_LPJ_G0027588.1 mouse_genomes_project 3 101574428 101657700 + MGP_LPJ_P0062574 Wars2 protein_coding protein_coding MGP_LPJ_T0062575.1 MGP_LPJ_G0027588.1 mouse_genomes_project 3 101574497 101641348 + Wars2 protein_coding retained_intron MGP_LPJ_T0014295.1 MGP_LPJ_G0012386.1 mouse_genomes_project 3 140400928 140403062 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102111.1 MGP_LPJ_G0040148.1 mouse_genomes_project 3 96654582 96698981 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0007740.1 MGP_LPJ_G0006332.1 mouse_genomes_project 3 142441731 142458372 + Gm19708 lincRNA lincRNA MGP_LPJ_T0001221.1 MGP_LPJ_G0001143.1 mouse_genomes_project 3 50720303 50723507 + TEC TEC MGP_LPJ_T0062054.1 MGP_LPJ_G0027477.1 mouse_genomes_project 3 96280434 96286431 + MGP_LPJ_P0062054 Lingo4 protein_coding protein_coding MGP_LPJ_T0061356.1 MGP_LPJ_G0027307.1 mouse_genomes_project 3 89000302 89009802 + MGP_LPJ_P0061356 Hdgf protein_coding protein_coding MGP_LPJ_T0061357.1 MGP_LPJ_G0027307.1 mouse_genomes_project 3 89000721 89008317 + MGP_LPJ_P0061357 Hdgf protein_coding nonsense_mediated_decay MGP_LPJ_T0061358.1 MGP_LPJ_G0027307.1 mouse_genomes_project 3 89001203 89007834 + Hdgf protein_coding processed_transcript MGP_LPJ_T0061359.1 MGP_LPJ_G0027307.1 mouse_genomes_project 3 89003701 89007850 + Hdgf protein_coding processed_transcript MGP_LPJ_T0061360.1 MGP_LPJ_G0027307.1 mouse_genomes_project 3 89007628 89008445 + Hdgf protein_coding retained_intron MGP_LPJ_T0001350.1 MGP_LPJ_G0001270.1 mouse_genomes_project 3 130595600 130598079 + TEC TEC MGP_LPJ_T0063664.1 MGP_LPJ_G0027814.1 mouse_genomes_project 3 135593789 135621138 - MGP_LPJ_P0063664 Sgms2 protein_coding protein_coding MGP_LPJ_T0063665.1 MGP_LPJ_G0027814.1 mouse_genomes_project 3 135618314 135621145 - MGP_LPJ_P0063665 Sgms2 protein_coding protein_coding MGP_LPJ_T0063666.1 MGP_LPJ_G0027814.1 mouse_genomes_project 3 135618373 135682313 - MGP_LPJ_P0063666 Sgms2 protein_coding protein_coding MGP_LPJ_T0063667.1 MGP_LPJ_G0027814.1 mouse_genomes_project 3 135618438 135683245 - Sgms2 protein_coding processed_transcript MGP_LPJ_T0100719.1 MGP_LPJ_G0038982.1 mouse_genomes_project 3 149315266 149315394 - Gm24406 snoRNA snoRNA MGP_LPJ_T0004373.1 MGP_LPJ_G0003822.1 mouse_genomes_project 3 119551901 119565523 + Gm43109 antisense antisense MGP_LPJ_T0010519.1 MGP_LPJ_G0008637.1 mouse_genomes_project 3 25007143 25007266 - Gm44464 miRNA miRNA MGP_LPJ_T0060057.1 MGP_LPJ_G0027040.1 mouse_genomes_project 3 18185624 18243441 - MGP_LPJ_P0060057 Agtr1b protein_coding protein_coding MGP_LPJ_T0060058.1 MGP_LPJ_G0027040.1 mouse_genomes_project 3 18186048 18243388 - MGP_LPJ_P0060058 Agtr1b protein_coding protein_coding MGP_LPJ_T0060225.1 MGP_LPJ_G0027070.1 mouse_genomes_project 3 29441153 29552745 - MGP_LPJ_P0060225 Slc7a14 protein_coding protein_coding MGP_LPJ_T0060226.1 MGP_LPJ_G0027070.1 mouse_genomes_project 3 29462995 29498724 - MGP_LPJ_P0060226 Slc7a14 protein_coding protein_coding MGP_LPJ_T0062251.1 MGP_LPJ_G0027510.1 mouse_genomes_project 3 97316353 97328939 - MGP_LPJ_P0062251 Anxa9 protein_coding protein_coding MGP_LPJ_T0062252.1 MGP_LPJ_G0027510.1 mouse_genomes_project 3 97316353 97329311 - MGP_LPJ_P0062252 Anxa9 protein_coding protein_coding MGP_LPJ_T0062253.1 MGP_LPJ_G0027510.1 mouse_genomes_project 3 97316555 97328939 - MGP_LPJ_P0062253 Anxa9 protein_coding protein_coding MGP_LPJ_T0062254.1 MGP_LPJ_G0027510.1 mouse_genomes_project 3 97328067 97328939 - MGP_LPJ_P0062254 Anxa9 protein_coding protein_coding MGP_LPJ_T0013980.1 MGP_LPJ_G0012071.1 mouse_genomes_project 3 44635150 44635511 - processed_pseudogene processed_pseudogene MGP_LPJ_T0062810.1 MGP_LPJ_G0027637.1 mouse_genomes_project 3 107499157 107522106 - MGP_LPJ_P0062810 Mov10 protein_coding protein_coding MGP_LPJ_T0062811.1 MGP_LPJ_G0027637.1 mouse_genomes_project 3 107499157 107521848 - MGP_LPJ_P0062811 Mov10 protein_coding protein_coding MGP_LPJ_T0062812.1 MGP_LPJ_G0027637.1 mouse_genomes_project 3 107499157 107522106 - MGP_LPJ_P0062812 Mov10 protein_coding nonsense_mediated_decay MGP_LPJ_T0062813.1 MGP_LPJ_G0027637.1 mouse_genomes_project 3 107499157 107522106 - MGP_LPJ_P0062813 Mov10 protein_coding protein_coding MGP_LPJ_T0062814.1 MGP_LPJ_G0027637.1 mouse_genomes_project 3 107499157 107521785 - MGP_LPJ_P0062814 Mov10 protein_coding protein_coding MGP_LPJ_T0062815.1 MGP_LPJ_G0027637.1 mouse_genomes_project 3 107508212 107520897 - Mov10 protein_coding processed_transcript MGP_LPJ_T0062816.1 MGP_LPJ_G0027637.1 mouse_genomes_project 3 107508253 107522106 - MGP_LPJ_P0062816 Mov10 protein_coding nonsense_mediated_decay MGP_LPJ_T0062817.1 MGP_LPJ_G0027637.1 mouse_genomes_project 3 107509070 107521659 - Mov10 protein_coding retained_intron MGP_LPJ_T0062818.1 MGP_LPJ_G0027637.1 mouse_genomes_project 3 107509091 107521844 - Mov10 protein_coding processed_transcript MGP_LPJ_T0060734.1 MGP_LPJ_G0027159.1 mouse_genomes_project 3 54577117 54614770 + MGP_LPJ_P0060734 Ccdc169 protein_coding protein_coding MGP_LPJ_T0060735.1 MGP_LPJ_G0027159.1 mouse_genomes_project 3 54579825 54613382 + MGP_LPJ_P0060735 Ccdc169 protein_coding protein_coding MGP_LPJ_T0060736.1 MGP_LPJ_G0027159.1 mouse_genomes_project 3 54579825 54612330 + MGP_LPJ_P0060736 Ccdc169 protein_coding protein_coding MGP_LPJ_T0060737.1 MGP_LPJ_G0027159.1 mouse_genomes_project 3 54579842 54596863 + MGP_LPJ_P0060737 Ccdc169 protein_coding protein_coding MGP_LPJ_T0060738.1 MGP_LPJ_G0027159.1 mouse_genomes_project 3 54582075 54613436 + MGP_LPJ_P0060738 Ccdc169 protein_coding nonsense_mediated_decay MGP_LPJ_T0060739.1 MGP_LPJ_G0027159.1 mouse_genomes_project 3 54582075 54613436 + MGP_LPJ_P0060739 Ccdc169 protein_coding nonsense_mediated_decay MGP_LPJ_T0063740.1 MGP_LPJ_G0027830.1 mouse_genomes_project 3 139619929 139655999 + MGP_LPJ_P0063740 Slc9b2 protein_coding nonsense_mediated_decay MGP_LPJ_T0063741.1 MGP_LPJ_G0027830.1 mouse_genomes_project 3 139619960 139637233 + Slc9b2 protein_coding retained_intron MGP_LPJ_T0063742.1 MGP_LPJ_G0027830.1 mouse_genomes_project 3 139619971 139630574 + MGP_LPJ_P0063742 Slc9b2 protein_coding protein_coding MGP_LPJ_T0063743.1 MGP_LPJ_G0027830.1 mouse_genomes_project 3 139619974 139658603 + MGP_LPJ_P0063743 Slc9b2 protein_coding protein_coding MGP_LPJ_T0063744.1 MGP_LPJ_G0027830.1 mouse_genomes_project 3 139642720 139656234 + Slc9b2 protein_coding retained_intron MGP_LPJ_T0060236.1 MGP_LPJ_G0027075.1 mouse_genomes_project 3 30844675 30865762 - MGP_LPJ_P0060236 Kcnmb3 protein_coding protein_coding MGP_LPJ_T0014310.1 MGP_LPJ_G0012401.1 mouse_genomes_project 3 145081985 145082535 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060518.1 MGP_LPJ_G0027122.1 mouse_genomes_project 3 39686130 39716180 + MGP_LPJ_P0060518 Larp1b protein_coding protein_coding MGP_LPJ_T0060519.1 MGP_LPJ_G0027122.1 mouse_genomes_project 3 39686568 39715644 + MGP_LPJ_P0060519 Larp1b protein_coding protein_coding MGP_LPJ_T0060520.1 MGP_LPJ_G0027122.1 mouse_genomes_project 3 39686594 39700271 + MGP_LPJ_P0060520 Larp1b protein_coding protein_coding MGP_LPJ_T0060521.1 MGP_LPJ_G0027122.1 mouse_genomes_project 3 39699674 39702074 + Larp1b protein_coding processed_transcript MGP_LPJ_T0060522.1 MGP_LPJ_G0027122.1 mouse_genomes_project 3 39700211 39715797 + MGP_LPJ_P0060522 Larp1b protein_coding protein_coding MGP_LPJ_T0060523.1 MGP_LPJ_G0027122.1 mouse_genomes_project 3 39702019 39751567 + MGP_LPJ_P0060523 Larp1b protein_coding nonsense_mediated_decay MGP_LPJ_T0060524.1 MGP_LPJ_G0027122.1 mouse_genomes_project 3 39709646 39715391 + Larp1b protein_coding processed_transcript MGP_LPJ_T0060525.1 MGP_LPJ_G0027122.1 mouse_genomes_project 3 39750277 39783556 + Larp1b protein_coding processed_transcript MGP_LPJ_T0060526.1 MGP_LPJ_G0027122.1 mouse_genomes_project 3 39765324 39783612 + Larp1b protein_coding retained_intron MGP_LPJ_T0060527.1 MGP_LPJ_G0027122.1 mouse_genomes_project 3 39767218 39783041 + Larp1b protein_coding processed_transcript MGP_LPJ_T0060528.1 MGP_LPJ_G0027122.1 mouse_genomes_project 3 39767896 39782477 + MGP_LPJ_P0060528 Larp1b protein_coding protein_coding MGP_LPJ_T0060529.1 MGP_LPJ_G0027122.1 mouse_genomes_project 3 39776900 39777626 + Larp1b protein_coding processed_transcript MGP_LPJ_T0060530.1 MGP_LPJ_G0027122.1 mouse_genomes_project 3 39776919 39783576 + Larp1b protein_coding processed_transcript MGP_LPJ_T0060531.1 MGP_LPJ_G0027122.1 mouse_genomes_project 3 39780118 39781999 + Larp1b protein_coding processed_transcript MGP_LPJ_T0060447.1 MGP_LPJ_G0027109.1 mouse_genomes_project 3 36042916 36057576 - MGP_LPJ_P0060447 Nudt6 protein_coding protein_coding MGP_LPJ_T0060448.1 MGP_LPJ_G0027109.1 mouse_genomes_project 3 36042916 36058279 - MGP_LPJ_P0060448 Nudt6 protein_coding protein_coding MGP_LPJ_T0060449.1 MGP_LPJ_G0027109.1 mouse_genomes_project 3 36042980 36057566 - MGP_LPJ_P0060449 Nudt6 protein_coding protein_coding MGP_LPJ_T0060450.1 MGP_LPJ_G0027109.1 mouse_genomes_project 3 36042992 36057586 - MGP_LPJ_P0060450 Nudt6 protein_coding protein_coding MGP_LPJ_T0060451.1 MGP_LPJ_G0027109.1 mouse_genomes_project 3 36043081 36048653 - Nudt6 protein_coding processed_transcript MGP_LPJ_T0060452.1 MGP_LPJ_G0027109.1 mouse_genomes_project 3 36043358 36057569 - MGP_LPJ_P0060452 Nudt6 protein_coding protein_coding MGP_LPJ_T0060453.1 MGP_LPJ_G0027109.1 mouse_genomes_project 3 36047482 36057553 - MGP_LPJ_P0060453 Nudt6 protein_coding nonsense_mediated_decay MGP_LPJ_T0060454.1 MGP_LPJ_G0027109.1 mouse_genomes_project 3 36050377 36057562 - MGP_LPJ_P0060454 Nudt6 protein_coding protein_coding MGP_LPJ_T0062644.1 MGP_LPJ_G0027607.1 mouse_genomes_project 3 104723464 104779330 - MGP_LPJ_P0062644 Vangl1 protein_coding protein_coding MGP_LPJ_T0062645.1 MGP_LPJ_G0027607.1 mouse_genomes_project 3 104731656 104740399 - MGP_LPJ_P0062645 Vangl1 protein_coding protein_coding MGP_LPJ_T0062646.1 MGP_LPJ_G0027607.1 mouse_genomes_project 3 104731659 104778600 - MGP_LPJ_P0062646 Vangl1 protein_coding protein_coding MGP_LPJ_T0062647.1 MGP_LPJ_G0027607.1 mouse_genomes_project 3 104731715 104779164 - MGP_LPJ_P0062647 Vangl1 protein_coding protein_coding MGP_LPJ_T0062648.1 MGP_LPJ_G0027607.1 mouse_genomes_project 3 104736341 104740442 - Vangl1 protein_coding retained_intron MGP_LPJ_T0062649.1 MGP_LPJ_G0027607.1 mouse_genomes_project 3 104736518 104739410 - Vangl1 protein_coding processed_transcript MGP_LPJ_T0062650.1 MGP_LPJ_G0027607.1 mouse_genomes_project 3 104759036 104772592 - MGP_LPJ_P0062650 Vangl1 protein_coding protein_coding MGP_LPJ_T0062651.1 MGP_LPJ_G0027607.1 mouse_genomes_project 3 104771509 104778518 - MGP_LPJ_P0062651 Vangl1 protein_coding protein_coding MGP_LPJ_T0007666.1 MGP_LPJ_G0006272.1 mouse_genomes_project 3 107340756 107344117 - Gm29561 lincRNA lincRNA MGP_LPJ_T0007793.1 MGP_LPJ_G0006372.1 mouse_genomes_project 3 157096098 157099841 + lincRNA lincRNA MGP_LPJ_T0061380.1 MGP_LPJ_G0027311.1 mouse_genomes_project 3 89047916 89052620 + MGP_LPJ_P0061380 Crabp2 protein_coding protein_coding MGP_LPJ_T0061381.1 MGP_LPJ_G0027311.1 mouse_genomes_project 3 89051387 89052229 + Crabp2 protein_coding retained_intron MGP_LPJ_T0014020.1 MGP_LPJ_G0012111.1 mouse_genomes_project 3 57885158 57885530 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014200.1 MGP_LPJ_G0012291.1 mouse_genomes_project 3 110969641 110970085 + processed_pseudogene processed_pseudogene MGP_LPJ_T0064067.1 MGP_LPJ_G0027897.1 mouse_genomes_project 3 151291701 151329637 + MGP_LPJ_P0064067 Ssx2ip protein_coding protein_coding MGP_LPJ_T0064068.1 MGP_LPJ_G0027897.1 mouse_genomes_project 3 151291701 151329275 + MGP_LPJ_P0064068 Ssx2ip protein_coding protein_coding MGP_LPJ_T0064069.1 MGP_LPJ_G0027897.1 mouse_genomes_project 3 151291723 151329626 + MGP_LPJ_P0064069 Ssx2ip protein_coding protein_coding MGP_LPJ_T0064070.1 MGP_LPJ_G0027897.1 mouse_genomes_project 3 151291745 151328399 + MGP_LPJ_P0064070 Ssx2ip protein_coding protein_coding MGP_LPJ_T0064071.1 MGP_LPJ_G0027897.1 mouse_genomes_project 3 151291750 151306071 + MGP_LPJ_P0064071 Ssx2ip protein_coding protein_coding MGP_LPJ_T0064072.1 MGP_LPJ_G0027897.1 mouse_genomes_project 3 151292037 151307031 + MGP_LPJ_P0064072 Ssx2ip protein_coding protein_coding MGP_LPJ_T0064073.1 MGP_LPJ_G0027897.1 mouse_genomes_project 3 151319989 151322072 + Ssx2ip protein_coding retained_intron MGP_LPJ_T0060217.1 MGP_LPJ_G0027068.1 mouse_genomes_project 3 29316126 29345469 + MGP_LPJ_P0060217 Skil protein_coding protein_coding MGP_LPJ_T0060218.1 MGP_LPJ_G0027068.1 mouse_genomes_project 3 29316129 29322461 + Skil protein_coding retained_intron MGP_LPJ_T0060219.1 MGP_LPJ_G0027068.1 mouse_genomes_project 3 29316129 29345469 + MGP_LPJ_P0060219 Skil protein_coding protein_coding MGP_LPJ_T0060220.1 MGP_LPJ_G0027068.1 mouse_genomes_project 3 29316133 29318959 + MGP_LPJ_P0060220 Skil protein_coding protein_coding MGP_LPJ_T0060221.1 MGP_LPJ_G0027068.1 mouse_genomes_project 3 29316193 29340591 + MGP_LPJ_P0060221 Skil protein_coding protein_coding MGP_LPJ_T0060222.1 MGP_LPJ_G0027068.1 mouse_genomes_project 3 29316214 29339924 + MGP_LPJ_P0060222 Skil protein_coding unknown_likely_coding MGP_LPJ_T0060223.1 MGP_LPJ_G0027068.1 mouse_genomes_project 3 29317899 29340302 + MGP_LPJ_P0060223 Skil protein_coding protein_coding MGP_LPJ_T0064215.1 MGP_LPJ_G0027918.1 mouse_genomes_project 3 157571913 157622089 + MGP_LPJ_P0064215 Usp33 protein_coding protein_coding MGP_LPJ_T0064216.1 MGP_LPJ_G0027918.1 mouse_genomes_project 3 157571913 157622368 + MGP_LPJ_P0064216 Usp33 protein_coding protein_coding MGP_LPJ_T0064217.1 MGP_LPJ_G0027918.1 mouse_genomes_project 3 157571924 157622373 + MGP_LPJ_P0064217 Usp33 protein_coding protein_coding MGP_LPJ_T0064218.1 MGP_LPJ_G0027918.1 mouse_genomes_project 3 157571947 157600209 + MGP_LPJ_P0064218 Usp33 protein_coding nonsense_mediated_decay MGP_LPJ_T0064219.1 MGP_LPJ_G0027918.1 mouse_genomes_project 3 157571950 157585605 + Usp33 protein_coding retained_intron MGP_LPJ_T0064220.1 MGP_LPJ_G0027918.1 mouse_genomes_project 3 157571979 157622095 + MGP_LPJ_P0064220 Usp33 protein_coding unknown_likely_coding MGP_LPJ_T0064221.1 MGP_LPJ_G0027918.1 mouse_genomes_project 3 157589172 157596844 + Usp33 protein_coding processed_transcript MGP_LPJ_T0064222.1 MGP_LPJ_G0027918.1 mouse_genomes_project 3 157590882 157595509 + Usp33 protein_coding retained_intron MGP_LPJ_T0064223.1 MGP_LPJ_G0027918.1 mouse_genomes_project 3 157593258 157601925 + Usp33 protein_coding retained_intron MGP_LPJ_T0064224.1 MGP_LPJ_G0027918.1 mouse_genomes_project 3 157596782 157603295 + MGP_LPJ_P0064224 Usp33 protein_coding nonsense_mediated_decay MGP_LPJ_T0064225.1 MGP_LPJ_G0027918.1 mouse_genomes_project 3 157610355 157621263 + Usp33 protein_coding processed_transcript MGP_LPJ_T0064226.1 MGP_LPJ_G0027918.1 mouse_genomes_project 3 157610843 157612564 + Usp33 protein_coding retained_intron MGP_LPJ_T0010520.1 MGP_LPJ_G0008638.1 mouse_genomes_project 3 25594528 25594624 - Mir3092 miRNA miRNA MGP_LPJ_T0059919.1 MGP_LPJ_G0027002.1 mouse_genomes_project 3 7809139 7828623 - MGP_LPJ_P0059919 Impa1 protein_coding protein_coding MGP_LPJ_T0059920.1 MGP_LPJ_G0027002.1 mouse_genomes_project 3 7811131 7828542 - MGP_LPJ_P0059920 Impa1 protein_coding protein_coding MGP_LPJ_T0059921.1 MGP_LPJ_G0027002.1 mouse_genomes_project 3 7811137 7828623 - MGP_LPJ_P0059921 Impa1 protein_coding protein_coding MGP_LPJ_T0059922.1 MGP_LPJ_G0027002.1 mouse_genomes_project 3 7812301 7813836 - Impa1 protein_coding retained_intron MGP_LPJ_T0059924.1 MGP_LPJ_G0027002.1 mouse_genomes_project 3 7823365 7828316 - MGP_LPJ_P0059924 Impa1 protein_coding protein_coding MGP_LPJ_T0007595.1 MGP_LPJ_G0006219.1 mouse_genomes_project 3 79939184 79940185 + 6430573P05Rik lincRNA lincRNA MGP_LPJ_T0007596.1 MGP_LPJ_G0006219.1 mouse_genomes_project 3 79939403 79941856 + 6430573P05Rik lincRNA lincRNA MGP_LPJ_T0007597.1 MGP_LPJ_G0006219.1 mouse_genomes_project 3 79939739 79940816 + 6430573P05Rik lincRNA lincRNA MGP_LPJ_T0098551.1 MGP_LPJ_G0036825.1 mouse_genomes_project 3 103592772 103595543 - Gm43465 sense_intronic sense_intronic MGP_LPJ_T0014249.1 MGP_LPJ_G0012340.1 mouse_genomes_project 3 126959529 126960216 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001388.1 MGP_LPJ_G0001307.1 mouse_genomes_project 3 137914634 137922054 - TEC TEC MGP_LPJ_T0063899.1 MGP_LPJ_G0027860.1 mouse_genomes_project 3 143395626 143562004 - MGP_LPJ_P0063899 Rap1gds1 protein_coding protein_coding MGP_LPJ_T0063900.1 MGP_LPJ_G0027860.1 mouse_genomes_project 3 143395630 143561940 - MGP_LPJ_P0063900 Rap1gds1 protein_coding protein_coding MGP_LPJ_T0063901.1 MGP_LPJ_G0027860.1 mouse_genomes_project 3 143395634 143561873 - MGP_LPJ_P0063901 Rap1gds1 protein_coding protein_coding MGP_LPJ_T0063902.1 MGP_LPJ_G0027860.1 mouse_genomes_project 3 143413332 143561943 - MGP_LPJ_P0063902 Rap1gds1 protein_coding nonsense_mediated_decay MGP_LPJ_T0063903.1 MGP_LPJ_G0027860.1 mouse_genomes_project 3 143413335 143561951 - MGP_LPJ_P0063903 Rap1gds1 protein_coding protein_coding MGP_LPJ_T0063904.1 MGP_LPJ_G0027860.1 mouse_genomes_project 3 143431473 143463416 - Rap1gds1 protein_coding retained_intron MGP_LPJ_T0063905.1 MGP_LPJ_G0027860.1 mouse_genomes_project 3 143495573 143561996 - Rap1gds1 protein_coding retained_intron MGP_LPJ_T0063906.1 MGP_LPJ_G0027860.1 mouse_genomes_project 3 143502878 143561601 - Rap1gds1 protein_coding processed_transcript MGP_LPJ_T0063907.1 MGP_LPJ_G0027860.1 mouse_genomes_project 3 143530113 143561943 - Rap1gds1 protein_coding retained_intron MGP_LPJ_T0004351.1 MGP_LPJ_G0003813.1 mouse_genomes_project 3 108793711 108810584 + Gm42722 antisense antisense MGP_LPJ_T0062160.1 MGP_LPJ_G0027494.1 mouse_genomes_project 3 97007549 97018780 - MGP_LPJ_P0062160 Psmd4 protein_coding protein_coding MGP_LPJ_T0062161.1 MGP_LPJ_G0027494.1 mouse_genomes_project 3 97007552 97018718 - MGP_LPJ_P0062161 Psmd4 protein_coding protein_coding MGP_LPJ_T0062162.1 MGP_LPJ_G0027494.1 mouse_genomes_project 3 97007559 97010171 - MGP_LPJ_P0062162 Psmd4 protein_coding protein_coding MGP_LPJ_T0062163.1 MGP_LPJ_G0027494.1 mouse_genomes_project 3 97007560 97018714 - Psmd4 protein_coding retained_intron MGP_LPJ_T0062164.1 MGP_LPJ_G0027494.1 mouse_genomes_project 3 97007560 97018709 - MGP_LPJ_P0062164 Psmd4 protein_coding protein_coding MGP_LPJ_T0062165.1 MGP_LPJ_G0027494.1 mouse_genomes_project 3 97007778 97018711 - Psmd4 protein_coding retained_intron MGP_LPJ_T0062166.1 MGP_LPJ_G0027494.1 mouse_genomes_project 3 97007783 97008820 - Psmd4 protein_coding retained_intron MGP_LPJ_T0062167.1 MGP_LPJ_G0027494.1 mouse_genomes_project 3 97010726 97018716 - Psmd4 protein_coding processed_transcript MGP_LPJ_T0007489.1 MGP_LPJ_G0006136.1 mouse_genomes_project 3 18179304 18180834 + Gm43525 lincRNA lincRNA MGP_LPJ_T0007667.1 MGP_LPJ_G0006273.1 mouse_genomes_project 3 108502161 108503408 - Gm43848 lincRNA lincRNA MGP_LPJ_T0007797.1 MGP_LPJ_G0006375.1 mouse_genomes_project 3 159078047 159080846 - 5730460C07Rik lincRNA lincRNA MGP_LPJ_T0001348.1 MGP_LPJ_G0001268.1 mouse_genomes_project 3 130393131 130397944 + TEC TEC MGP_LPJ_T0013897.1 MGP_LPJ_G0011988.1 mouse_genomes_project 3 12336339 12336628 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007656.1 MGP_LPJ_G0006264.1 mouse_genomes_project 3 104293700 104295525 + Gm43134 lincRNA lincRNA MGP_LPJ_T0063541.1 MGP_LPJ_G0027790.1 mouse_genomes_project 3 131726491 131837017 - MGP_LPJ_P0063541 Alpk1 protein_coding protein_coding MGP_LPJ_T0063542.1 MGP_LPJ_G0027790.1 mouse_genomes_project 3 131726491 131794979 - MGP_LPJ_P0063542 Alpk1 protein_coding protein_coding MGP_LPJ_T0063543.1 MGP_LPJ_G0027790.1 mouse_genomes_project 3 131726580 131837017 - Alpk1 protein_coding retained_intron MGP_LPJ_T0063544.1 MGP_LPJ_G0027790.1 mouse_genomes_project 3 131737027 131745209 - MGP_LPJ_P0063544 Alpk1 protein_coding protein_coding MGP_LPJ_T0063545.1 MGP_LPJ_G0027790.1 mouse_genomes_project 3 131789752 131837003 - Alpk1 protein_coding retained_intron MGP_LPJ_T0063546.1 MGP_LPJ_G0027790.1 mouse_genomes_project 3 131818639 131836980 - Alpk1 protein_coding processed_transcript MGP_LPJ_T0062819.1 MGP_LPJ_G0027638.1 mouse_genomes_project 3 107526381 107579435 - MGP_LPJ_P0062819 Capza1 protein_coding protein_coding MGP_LPJ_T0062820.1 MGP_LPJ_G0027638.1 mouse_genomes_project 3 107548858 107579330 - MGP_LPJ_P0062820 Capza1 protein_coding protein_coding MGP_LPJ_T0062821.1 MGP_LPJ_G0027638.1 mouse_genomes_project 3 107554581 107557432 - Capza1 protein_coding retained_intron MGP_LPJ_T0062822.1 MGP_LPJ_G0027638.1 mouse_genomes_project 3 107556757 107579303 - Capza1 protein_coding retained_intron MGP_LPJ_T0014334.1 MGP_LPJ_G0012425.1 mouse_genomes_project 3 158027195 158029363 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010542.1 MGP_LPJ_G0008660.1 mouse_genomes_project 3 86408545 86408663 + Mir466k miRNA miRNA MGP_LPJ_T0007522.1 MGP_LPJ_G0006164.1 mouse_genomes_project 3 35097925 35104764 - Gm11549 lincRNA lincRNA MGP_LPJ_T0007720.1 MGP_LPJ_G0006313.1 mouse_genomes_project 3 135111371 135114126 + Gm43351 lincRNA lincRNA MGP_LPJ_T0001314.1 MGP_LPJ_G0001234.1 mouse_genomes_project 3 110812148 110812834 + TEC TEC MGP_LPJ_T0013868.1 MGP_LPJ_G0011959.1 mouse_genomes_project 3 5801699 5802507 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099437.1 MGP_LPJ_G0037700.1 mouse_genomes_project 3 113638108 113638213 - Gm26076 snRNA snRNA MGP_LPJ_T0060656.1 MGP_LPJ_G0027144.1 mouse_genomes_project 3 52787756 52808021 + MGP_LPJ_P0060656 Proser1 protein_coding protein_coding MGP_LPJ_T0060657.1 MGP_LPJ_G0027144.1 mouse_genomes_project 3 52787897 52788837 + Proser1 protein_coding retained_intron MGP_LPJ_T0060658.1 MGP_LPJ_G0027144.1 mouse_genomes_project 3 52788022 52798585 + Proser1 protein_coding retained_intron MGP_LPJ_T0060659.1 MGP_LPJ_G0027144.1 mouse_genomes_project 3 52804336 52806131 + Proser1 protein_coding retained_intron MGP_LPJ_T0059869.1 MGP_LPJ_G0026985.1 mouse_genomes_project 3 3927379 3937060 - MGP_LPJ_P0059869 1700008P02Rik protein_coding protein_coding MGP_LPJ_T0062823.1 MGP_LPJ_G0027639.1 mouse_genomes_project 3 107578934 107581389 + St7l protein_coding retained_intron MGP_LPJ_T0062824.1 MGP_LPJ_G0027639.1 mouse_genomes_project 3 107579432 107672997 + MGP_LPJ_P0062824 St7l protein_coding protein_coding MGP_LPJ_T0062825.1 MGP_LPJ_G0027639.1 mouse_genomes_project 3 107579432 107676183 + MGP_LPJ_P0062825 St7l protein_coding protein_coding MGP_LPJ_T0062826.1 MGP_LPJ_G0027639.1 mouse_genomes_project 3 107579996 107673902 + MGP_LPJ_P0062826 St7l protein_coding protein_coding MGP_LPJ_T0062827.1 MGP_LPJ_G0027639.1 mouse_genomes_project 3 107580000 107674026 + MGP_LPJ_P0062827 St7l protein_coding nonsense_mediated_decay MGP_LPJ_T0062828.1 MGP_LPJ_G0027639.1 mouse_genomes_project 3 107580009 107632242 + MGP_LPJ_P0062828 St7l protein_coding protein_coding MGP_LPJ_T0062829.1 MGP_LPJ_G0027639.1 mouse_genomes_project 3 107580042 107632174 + St7l protein_coding processed_transcript MGP_LPJ_T0062830.1 MGP_LPJ_G0027639.1 mouse_genomes_project 3 107586079 107665692 + MGP_LPJ_P0062830 St7l protein_coding protein_coding MGP_LPJ_T0062831.1 MGP_LPJ_G0027639.1 mouse_genomes_project 3 107586102 107625203 + St7l protein_coding processed_transcript MGP_LPJ_T0062832.1 MGP_LPJ_G0027639.1 mouse_genomes_project 3 107625106 107665680 + MGP_LPJ_P0062832 St7l protein_coding nonsense_mediated_decay MGP_LPJ_T0062833.1 MGP_LPJ_G0027639.1 mouse_genomes_project 3 107631759 107638299 + St7l protein_coding retained_intron MGP_LPJ_T0062576.1 MGP_LPJ_G0027589.1 mouse_genomes_project 3 101684449 101757873 + MGP_LPJ_P0062576 Tbx15 protein_coding protein_coding MGP_LPJ_T0062577.1 MGP_LPJ_G0027589.1 mouse_genomes_project 3 101699062 101799558 + MGP_LPJ_P0062577 Tbx15 protein_coding protein_coding MGP_LPJ_T0062578.1 MGP_LPJ_G0027589.1 mouse_genomes_project 3 101741310 101761048 + MGP_LPJ_P0062578 Tbx15 protein_coding protein_coding MGP_LPJ_T0004314.1 MGP_LPJ_G0003789.1 mouse_genomes_project 3 97228703 97237894 + Gm16740 antisense antisense MGP_LPJ_T0014324.1 MGP_LPJ_G0012415.1 mouse_genomes_project 3 151472002 151472394 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001247.1 MGP_LPJ_G0001167.1 mouse_genomes_project 3 54773127 54775259 + TEC TEC MGP_LPJ_T0001216.1 MGP_LPJ_G0001138.1 mouse_genomes_project 3 50448322 50450656 + TEC TEC MGP_LPJ_T0062967.1 MGP_LPJ_G0027679.1 mouse_genomes_project 3 110559446 110561203 + MGP_LPJ_P0062967 Gm10961 protein_coding protein_coding MGP_LPJ_T0060322.1 MGP_LPJ_G0027087.1 mouse_genomes_project 3 32481904 32507797 - MGP_LPJ_P0060322 Dnajc19 protein_coding protein_coding MGP_LPJ_T0060323.1 MGP_LPJ_G0027087.1 mouse_genomes_project 3 32503763 32507806 - MGP_LPJ_P0060323 Dnajc19 protein_coding protein_coding MGP_LPJ_T0060324.1 MGP_LPJ_G0027087.1 mouse_genomes_project 3 32503808 32507795 - MGP_LPJ_P0060324 Dnajc19 protein_coding protein_coding MGP_LPJ_T0060325.1 MGP_LPJ_G0027087.1 mouse_genomes_project 3 32503838 32506665 - Dnajc19 protein_coding retained_intron MGP_LPJ_T0060326.1 MGP_LPJ_G0027087.1 mouse_genomes_project 3 32503918 32507747 - MGP_LPJ_P0060326 Dnajc19 protein_coding protein_coding MGP_LPJ_T0014327.1 MGP_LPJ_G0012418.1 mouse_genomes_project 3 152125949 152126398 - processed_pseudogene processed_pseudogene MGP_LPJ_T0062942.1 MGP_LPJ_G0027671.1 mouse_genomes_project 3 110176420 110181644 + MGP_LPJ_P0062942 Lamtor5 protein_coding protein_coding MGP_LPJ_T0062943.1 MGP_LPJ_G0027671.1 mouse_genomes_project 3 110176561 110181647 + MGP_LPJ_P0062943 Lamtor5 protein_coding protein_coding MGP_LPJ_T0014148.1 MGP_LPJ_G0012239.1 mouse_genomes_project 3 97508737 97509089 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062035.1 MGP_LPJ_G0027467.1 mouse_genomes_project 3 95003220 95004304 + MGP_LPJ_P0062035 protein_coding protein_coding MGP_LPJ_T0001249.1 MGP_LPJ_G0001169.1 mouse_genomes_project 3 54974602 54976620 + TEC TEC MGP_LPJ_T0001339.1 MGP_LPJ_G0001259.1 mouse_genomes_project 3 126365111 126367660 - TEC TEC MGP_LPJ_T0007776.1 MGP_LPJ_G0006363.1 mouse_genomes_project 3 152547296 152567632 - Gm36888 lincRNA lincRNA MGP_LPJ_T0062010.1 MGP_LPJ_G0027450.1 mouse_genomes_project 3 94449294 94451574 - MGP_LPJ_P0062010 Lce1h protein_coding protein_coding MGP_LPJ_T0001217.1 MGP_LPJ_G0001139.1 mouse_genomes_project 3 50489337 50490962 + TEC TEC MGP_LPJ_T0014199.1 MGP_LPJ_G0012290.1 mouse_genomes_project 3 110947583 110947986 - processed_pseudogene processed_pseudogene MGP_LPJ_T0059835.1 MGP_LPJ_G0026976.1 mouse_genomes_project 3 1892431 1899586 - MGP_LPJ_P0059835 protein_coding protein_coding MGP_LPJ_T0059840.1 MGP_LPJ_G0026976.1 mouse_genomes_project 3 1895061 1901991 - protein_coding processed_transcript MGP_LPJ_T0059843.1 MGP_LPJ_G0026976.1 mouse_genomes_project 3 1899083 1903787 - protein_coding processed_transcript MGP_LPJ_T0013964.1 MGP_LPJ_G0012055.1 mouse_genomes_project 3 37863382 37863755 - processed_pseudogene processed_pseudogene MGP_LPJ_T0059985.1 MGP_LPJ_G0027025.1 mouse_genomes_project 3 15868119 16044765 - MGP_LPJ_P0059985 Cyp7b1 protein_coding protein_coding MGP_LPJ_T0101337.1 MGP_LPJ_G0039545.1 mouse_genomes_project 3 147545886 147546405 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0001420.1 MGP_LPJ_G0001339.1 mouse_genomes_project 3 162079599 162082167 + TEC TEC MGP_LPJ_T0063176.1 MGP_LPJ_G0027726.1 mouse_genomes_project 3 116882220 116908470 - MGP_LPJ_P0063176 protein_coding protein_coding MGP_LPJ_T0063177.1 MGP_LPJ_G0027726.1 mouse_genomes_project 3 116882463 116905402 - MGP_LPJ_P0063177 protein_coding protein_coding MGP_LPJ_T0063178.1 MGP_LPJ_G0027726.1 mouse_genomes_project 3 116882659 116888530 - protein_coding retained_intron MGP_LPJ_T0063179.1 MGP_LPJ_G0027726.1 mouse_genomes_project 3 116889184 116904912 - MGP_LPJ_P0063179 protein_coding protein_coding MGP_LPJ_T0063180.1 MGP_LPJ_G0027726.1 mouse_genomes_project 3 116891509 116943022 - MGP_LPJ_P0063180 protein_coding protein_coding MGP_LPJ_T0007665.1 MGP_LPJ_G0006271.1 mouse_genomes_project 3 107004851 107020817 - Gm5546 lincRNA lincRNA MGP_LPJ_T0013938.1 MGP_LPJ_G0012029.1 mouse_genomes_project 3 29182811 29183274 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062019.1 MGP_LPJ_G0027458.1 mouse_genomes_project 3 94658275 94659523 + MGP_LPJ_P0062019 protein_coding protein_coding MGP_LPJ_T0001259.1 MGP_LPJ_G0001179.1 mouse_genomes_project 3 58316787 58317895 + TEC TEC MGP_LPJ_T0013891.1 MGP_LPJ_G0011982.1 mouse_genomes_project 3 11424719 11424974 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013989.1 MGP_LPJ_G0012080.1 mouse_genomes_project 3 48740987 48741548 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013939.1 MGP_LPJ_G0012030.1 mouse_genomes_project 3 30612184 30612956 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062938.1 MGP_LPJ_G0027669.1 mouse_genomes_project 3 110125411 110129522 + MGP_LPJ_P0062938 A630076J17Rik protein_coding protein_coding MGP_LPJ_T0062932.1 MGP_LPJ_G0027666.1 mouse_genomes_project 3 109990562 109997952 + MGP_LPJ_P0062932 Kcna2 protein_coding protein_coding MGP_LPJ_T0062933.1 MGP_LPJ_G0027666.1 mouse_genomes_project 3 109990983 110005224 + MGP_LPJ_P0062933 Kcna2 protein_coding protein_coding MGP_LPJ_T0062934.1 MGP_LPJ_G0027666.1 mouse_genomes_project 3 109992098 109995388 + MGP_LPJ_P0062934 Kcna2 protein_coding protein_coding MGP_LPJ_T0010546.1 MGP_LPJ_G0008664.1 mouse_genomes_project 3 89330896 89330985 + Mir9-1 miRNA miRNA MGP_LPJ_T0098418.1 MGP_LPJ_G0036699.1 mouse_genomes_project 3 89885446 89885573 + Gm25820 scaRNA scaRNA MGP_LPJ_T0014243.1 MGP_LPJ_G0012334.1 mouse_genomes_project 3 125913339 125913751 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060014.1 MGP_LPJ_G0027034.1 mouse_genomes_project 3 17813963 17850425 + MGP_LPJ_P0060014 Cp protein_coding protein_coding MGP_LPJ_T0060015.1 MGP_LPJ_G0027034.1 mouse_genomes_project 3 17813963 17865613 + MGP_LPJ_P0060015 Cp protein_coding protein_coding MGP_LPJ_T0060016.1 MGP_LPJ_G0027034.1 mouse_genomes_project 3 17813970 17826282 + Cp protein_coding retained_intron MGP_LPJ_T0060017.1 MGP_LPJ_G0027034.1 mouse_genomes_project 3 17813978 17867144 + MGP_LPJ_P0060017 Cp protein_coding protein_coding MGP_LPJ_T0060018.1 MGP_LPJ_G0027034.1 mouse_genomes_project 3 17814020 17865613 + MGP_LPJ_P0060018 Cp protein_coding protein_coding MGP_LPJ_T0060019.1 MGP_LPJ_G0027034.1 mouse_genomes_project 3 17814128 17825950 + Cp protein_coding retained_intron MGP_LPJ_T0060020.1 MGP_LPJ_G0027034.1 mouse_genomes_project 3 17814193 17849812 + MGP_LPJ_P0060020 Cp protein_coding protein_coding MGP_LPJ_T0060021.1 MGP_LPJ_G0027034.1 mouse_genomes_project 3 17826786 17846364 + Cp protein_coding retained_intron MGP_LPJ_T0060022.1 MGP_LPJ_G0027034.1 mouse_genomes_project 3 17827829 17831998 + Cp protein_coding retained_intron MGP_LPJ_T0060023.1 MGP_LPJ_G0027034.1 mouse_genomes_project 3 17831704 17838039 + Cp protein_coding retained_intron MGP_LPJ_T0060024.1 MGP_LPJ_G0027034.1 mouse_genomes_project 3 17837925 17844694 + MGP_LPJ_P0060024 Cp protein_coding nonsense_mediated_decay MGP_LPJ_T0060025.1 MGP_LPJ_G0027034.1 mouse_genomes_project 3 17838725 17840785 + Cp protein_coding retained_intron MGP_LPJ_T0060026.1 MGP_LPJ_G0027034.1 mouse_genomes_project 3 17839300 17843201 + MGP_LPJ_P0060026 Cp protein_coding protein_coding MGP_LPJ_T0060027.1 MGP_LPJ_G0027034.1 mouse_genomes_project 3 17842909 17849869 + MGP_LPJ_P0060027 Cp protein_coding protein_coding MGP_LPJ_T0060028.1 MGP_LPJ_G0027034.1 mouse_genomes_project 3 17844842 17846926 + Cp protein_coding retained_intron MGP_LPJ_T0060029.1 MGP_LPJ_G0027034.1 mouse_genomes_project 3 17846450 17864362 + MGP_LPJ_P0060029 Cp protein_coding protein_coding MGP_LPJ_T0014117.1 MGP_LPJ_G0012208.1 mouse_genomes_project 3 89067399 89067820 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007800.1 MGP_LPJ_G0006378.1 mouse_genomes_project 3 161967903 161985634 - 4930570G19Rik lincRNA lincRNA MGP_LPJ_T0007801.1 MGP_LPJ_G0006378.1 mouse_genomes_project 3 161967911 161985529 - 4930570G19Rik lincRNA lincRNA MGP_LPJ_T0007802.1 MGP_LPJ_G0006378.1 mouse_genomes_project 3 161969570 161985622 - 4930570G19Rik lincRNA lincRNA MGP_LPJ_T0007803.1 MGP_LPJ_G0006378.1 mouse_genomes_project 3 161983303 161985693 - 4930570G19Rik lincRNA lincRNA MGP_LPJ_T0063770.1 MGP_LPJ_G0027834.1 mouse_genomes_project 3 139813896 139904368 + MGP_LPJ_P0063770 Manba protein_coding protein_coding MGP_LPJ_T0063771.1 MGP_LPJ_G0027834.1 mouse_genomes_project 3 139813896 139887749 + MGP_LPJ_P0063771 Manba protein_coding nonsense_mediated_decay MGP_LPJ_T0063772.1 MGP_LPJ_G0027834.1 mouse_genomes_project 3 139813904 139887708 + Manba protein_coding retained_intron MGP_LPJ_T0063773.1 MGP_LPJ_G0027834.1 mouse_genomes_project 3 139813910 139843939 + Manba protein_coding retained_intron MGP_LPJ_T0063774.1 MGP_LPJ_G0027834.1 mouse_genomes_project 3 139848257 139874252 + Manba protein_coding processed_transcript MGP_LPJ_T0063775.1 MGP_LPJ_G0027834.1 mouse_genomes_project 3 139854055 139855680 + Manba protein_coding processed_transcript MGP_LPJ_T0063776.1 MGP_LPJ_G0027834.1 mouse_genomes_project 3 139876577 139883678 + Manba protein_coding retained_intron MGP_LPJ_T0063777.1 MGP_LPJ_G0027834.1 mouse_genomes_project 3 139881005 139886950 + Manba protein_coding processed_transcript MGP_LPJ_T0063778.1 MGP_LPJ_G0027834.1 mouse_genomes_project 3 139883081 139888945 + Manba protein_coding processed_transcript MGP_LPJ_T0063779.1 MGP_LPJ_G0027834.1 mouse_genomes_project 3 139883152 139896233 + Manba protein_coding processed_transcript MGP_LPJ_T0063780.1 MGP_LPJ_G0027834.1 mouse_genomes_project 3 139896193 139900519 + Manba protein_coding processed_transcript MGP_LPJ_T0007456.1 MGP_LPJ_G0006117.1 mouse_genomes_project 3 2365676 2370173 + Gm17308 lincRNA lincRNA MGP_LPJ_T0062055.1 MGP_LPJ_G0027478.1 mouse_genomes_project 3 96295069 96314229 + MGP_LPJ_P0062055 Tdrkh protein_coding protein_coding MGP_LPJ_T0062056.1 MGP_LPJ_G0027478.1 mouse_genomes_project 3 96295091 96307416 + MGP_LPJ_P0062056 Tdrkh protein_coding nonsense_mediated_decay MGP_LPJ_T0062057.1 MGP_LPJ_G0027478.1 mouse_genomes_project 3 96295108 96307988 + MGP_LPJ_P0062057 Tdrkh protein_coding protein_coding MGP_LPJ_T0062058.1 MGP_LPJ_G0027478.1 mouse_genomes_project 3 96304581 96313111 + MGP_LPJ_P0062058 Tdrkh protein_coding protein_coding MGP_LPJ_T0062059.1 MGP_LPJ_G0027478.1 mouse_genomes_project 3 96304581 96313098 + MGP_LPJ_P0062059 Tdrkh protein_coding protein_coding MGP_LPJ_T0007499.1 MGP_LPJ_G0006146.1 mouse_genomes_project 3 27898881 28027191 - Gm33206 lincRNA lincRNA MGP_LPJ_T0062583.1 MGP_LPJ_G0027591.1 mouse_genomes_project 3 102596994 102621049 - MGP_LPJ_P0062583 Wdr3 protein_coding protein_coding MGP_LPJ_T0062584.1 MGP_LPJ_G0027591.1 mouse_genomes_project 3 102597549 102600436 - Wdr3 protein_coding retained_intron MGP_LPJ_T0062585.1 MGP_LPJ_G0027591.1 mouse_genomes_project 3 102601313 102621049 - Wdr3 protein_coding retained_intron MGP_LPJ_T0062586.1 MGP_LPJ_G0027591.1 mouse_genomes_project 3 102601315 102602397 - Wdr3 protein_coding retained_intron MGP_LPJ_T0062587.1 MGP_LPJ_G0027591.1 mouse_genomes_project 3 102616183 102620974 - MGP_LPJ_P0062587 Wdr3 protein_coding nonsense_mediated_decay MGP_LPJ_T0062588.1 MGP_LPJ_G0027591.1 mouse_genomes_project 3 102616183 102621039 - MGP_LPJ_P0062588 Wdr3 protein_coding nonsense_mediated_decay MGP_LPJ_T0063030.1 MGP_LPJ_G0027693.1 mouse_genomes_project 3 111101487 111108093 - MGP_LPJ_P0063030 Gpr61 protein_coding protein_coding MGP_LPJ_T0063031.1 MGP_LPJ_G0027693.1 mouse_genomes_project 3 111101823 111108093 - MGP_LPJ_P0063031 Gpr61 protein_coding nonsense_mediated_decay MGP_LPJ_T0004271.1 MGP_LPJ_G0003758.1 mouse_genomes_project 3 62168352 62171361 - 9330121J05Rik antisense antisense MGP_LPJ_T0099424.1 MGP_LPJ_G0037687.1 mouse_genomes_project 3 96871469 96871571 - Gm26279 snRNA snRNA MGP_LPJ_T0001346.1 MGP_LPJ_G0001266.1 mouse_genomes_project 3 128284466 128285414 - TEC TEC MGP_LPJ_T0062027.1 MGP_LPJ_G0027464.1 mouse_genomes_project 3 94883490 94888165 + MGP_LPJ_P0062027 Crnn protein_coding protein_coding MGP_LPJ_T0062028.1 MGP_LPJ_G0027464.1 mouse_genomes_project 3 94883492 94888513 + MGP_LPJ_P0062028 Crnn protein_coding protein_coding MGP_LPJ_T0062029.1 MGP_LPJ_G0027464.1 mouse_genomes_project 3 94886903 94888512 + MGP_LPJ_P0062029 Crnn protein_coding protein_coding MGP_LPJ_T0004252.1 MGP_LPJ_G0003742.1 mouse_genomes_project 3 40314254 40315674 - Gm31266 antisense antisense MGP_LPJ_T0061308.1 MGP_LPJ_G0027298.1 mouse_genomes_project 3 88488120 88520031 + MGP_LPJ_P0061308 Fcrl5 protein_coding protein_coding MGP_LPJ_T0061309.1 MGP_LPJ_G0027298.1 mouse_genomes_project 3 88488160 88551905 + MGP_LPJ_P0061309 Fcrl5 protein_coding protein_coding MGP_LPJ_T0061310.1 MGP_LPJ_G0027298.1 mouse_genomes_project 3 88488232 88509902 + MGP_LPJ_P0061310 Fcrl5 protein_coding protein_coding MGP_LPJ_T0061311.1 MGP_LPJ_G0027298.1 mouse_genomes_project 3 88488232 88509902 + MGP_LPJ_P0061311 Fcrl5 protein_coding protein_coding MGP_LPJ_T0061312.1 MGP_LPJ_G0027298.1 mouse_genomes_project 3 88488232 88509902 + MGP_LPJ_P0061312 Fcrl5 protein_coding protein_coding MGP_LPJ_T0062715.1 MGP_LPJ_G0027618.1 mouse_genomes_project 3 105746876 105754390 + MGP_LPJ_P0062715 Bcas2 protein_coding protein_coding MGP_LPJ_T0062716.1 MGP_LPJ_G0027618.1 mouse_genomes_project 3 105746924 105754089 + Bcas2 protein_coding retained_intron MGP_LPJ_T0062717.1 MGP_LPJ_G0027618.1 mouse_genomes_project 3 105746970 105754091 + Bcas2 protein_coding retained_intron MGP_LPJ_T0062718.1 MGP_LPJ_G0027618.1 mouse_genomes_project 3 105746983 105753710 + MGP_LPJ_P0062718 Bcas2 protein_coding nonsense_mediated_decay MGP_LPJ_T0062719.1 MGP_LPJ_G0027618.1 mouse_genomes_project 3 105746993 105754404 + MGP_LPJ_P0062719 Bcas2 protein_coding nonsense_mediated_decay MGP_LPJ_T0062720.1 MGP_LPJ_G0027618.1 mouse_genomes_project 3 105747006 105749801 + Bcas2 protein_coding retained_intron MGP_LPJ_T0061111.1 MGP_LPJ_G0027249.1 mouse_genomes_project 3 80267874 80279791 + Ppid protein_coding retained_intron MGP_LPJ_T0061112.1 MGP_LPJ_G0027249.1 mouse_genomes_project 3 80267897 80280165 + MGP_LPJ_P0061112 Ppid protein_coding protein_coding MGP_LPJ_T0061113.1 MGP_LPJ_G0027249.1 mouse_genomes_project 3 80268020 80271828 + Ppid protein_coding processed_transcript MGP_LPJ_T0061114.1 MGP_LPJ_G0027249.1 mouse_genomes_project 3 80270230 80274281 + MGP_LPJ_P0061114 Ppid protein_coding nonsense_mediated_decay MGP_LPJ_T0061115.1 MGP_LPJ_G0027249.1 mouse_genomes_project 3 80272676 80274707 + Ppid protein_coding retained_intron MGP_LPJ_T0061116.1 MGP_LPJ_G0027249.1 mouse_genomes_project 3 80275227 80278843 + Ppid protein_coding retained_intron MGP_LPJ_T0001383.1 MGP_LPJ_G0001302.1 mouse_genomes_project 3 135809334 135812678 - TEC TEC MGP_LPJ_T0007555.1 MGP_LPJ_G0006187.1 mouse_genomes_project 3 51400976 51495594 - Gm37202 lincRNA lincRNA MGP_LPJ_T0001380.1 MGP_LPJ_G0001299.1 mouse_genomes_project 3 135142433 135143812 + TEC TEC MGP_LPJ_T0017907.1 MGP_LPJ_G0015422.1 mouse_genomes_project 3 83456463 83459344 - Gm29999 processed_transcript retained_intron MGP_LPJ_T0017908.1 MGP_LPJ_G0015422.1 mouse_genomes_project 3 83456609 83462261 - Gm29999 processed_transcript lincRNA MGP_LPJ_T0060228.1 MGP_LPJ_G0027072.1 mouse_genomes_project 3 30237160 30557954 + MGP_LPJ_P0060228 Kcnmb2 protein_coding protein_coding MGP_LPJ_T0060229.1 MGP_LPJ_G0027072.1 mouse_genomes_project 3 30515621 30556546 + MGP_LPJ_P0060229 Kcnmb2 protein_coding protein_coding MGP_LPJ_T0098572.1 MGP_LPJ_G0036846.1 mouse_genomes_project 3 106799645 106801561 - Gm43258 sense_intronic sense_intronic MGP_LPJ_T0014255.1 MGP_LPJ_G0012346.1 mouse_genomes_project 3 128942440 128943452 - processed_pseudogene processed_pseudogene MGP_LPJ_T0061192.1 MGP_LPJ_G0027269.1 mouse_genomes_project 3 83850890 83860661 - MGP_LPJ_P0061192 Fgb protein_coding protein_coding MGP_LPJ_T0060230.1 MGP_LPJ_G0027073.1 mouse_genomes_project 3 30703183 30735380 - MGP_LPJ_P0060230 Zmat3 protein_coding protein_coding MGP_LPJ_T0060231.1 MGP_LPJ_G0027073.1 mouse_genomes_project 3 30703187 30735322 - MGP_LPJ_P0060231 Zmat3 protein_coding protein_coding MGP_LPJ_T0060232.1 MGP_LPJ_G0027073.1 mouse_genomes_project 3 30730772 30735162 - MGP_LPJ_P0060232 Zmat3 protein_coding protein_coding MGP_LPJ_T0060233.1 MGP_LPJ_G0027073.1 mouse_genomes_project 3 30731898 30735722 - Zmat3 protein_coding retained_intron MGP_LPJ_T0013860.1 MGP_LPJ_G0011951.1 mouse_genomes_project 3 3750378 3751360 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100674.1 MGP_LPJ_G0038937.1 mouse_genomes_project 3 64926656 64926782 - Gm25222 snoRNA snoRNA MGP_LPJ_T0011567.1 MGP_LPJ_G0009685.1 mouse_genomes_project 3 158893325 158893593 + Gm22136 misc_RNA misc_RNA MGP_LPJ_T0064087.1 MGP_LPJ_G0027901.1 mouse_genomes_project 3 151411378 151426841 - MGP_LPJ_P0064087 Rpf1 protein_coding protein_coding MGP_LPJ_T0064088.1 MGP_LPJ_G0027901.1 mouse_genomes_project 3 151411766 151413647 - MGP_LPJ_P0064088 Rpf1 protein_coding protein_coding MGP_LPJ_T0064089.1 MGP_LPJ_G0027901.1 mouse_genomes_project 3 151411845 151413915 - Rpf1 protein_coding retained_intron MGP_LPJ_T0064090.1 MGP_LPJ_G0027901.1 mouse_genomes_project 3 151413595 151426463 - Rpf1 protein_coding processed_transcript MGP_LPJ_T0064091.1 MGP_LPJ_G0027901.1 mouse_genomes_project 3 151416218 151426823 - MGP_LPJ_P0064091 Rpf1 protein_coding protein_coding MGP_LPJ_T0060926.1 MGP_LPJ_G0027206.1 mouse_genomes_project 3 65133040 65395312 + Kcnab1 protein_coding processed_transcript MGP_LPJ_T0060927.1 MGP_LPJ_G0027206.1 mouse_genomes_project 3 65133040 65407755 + MGP_LPJ_P0060927 Kcnab1 protein_coding protein_coding MGP_LPJ_T0060928.1 MGP_LPJ_G0027206.1 mouse_genomes_project 3 65219978 65407759 + Kcnab1 protein_coding processed_transcript MGP_LPJ_T0060929.1 MGP_LPJ_G0027206.1 mouse_genomes_project 3 65281112 65406620 + Kcnab1 protein_coding processed_transcript MGP_LPJ_T0060930.1 MGP_LPJ_G0027206.1 mouse_genomes_project 3 65325770 65386592 + Kcnab1 protein_coding processed_transcript MGP_LPJ_T0060931.1 MGP_LPJ_G0027206.1 mouse_genomes_project 3 65383252 65388326 + Kcnab1 protein_coding retained_intron MGP_LPJ_T0061441.1 MGP_LPJ_G0027325.1 mouse_genomes_project 3 89474668 89480982 - MGP_LPJ_P0061441 Tmem79 protein_coding protein_coding MGP_LPJ_T0061442.1 MGP_LPJ_G0027325.1 mouse_genomes_project 3 89475059 89480746 - MGP_LPJ_P0061442 Tmem79 protein_coding protein_coding MGP_LPJ_T0061443.1 MGP_LPJ_G0027325.1 mouse_genomes_project 3 89475060 89480932 - MGP_LPJ_P0061443 Tmem79 protein_coding protein_coding MGP_LPJ_T0061444.1 MGP_LPJ_G0027325.1 mouse_genomes_project 3 89479615 89482622 - MGP_LPJ_P0061444 Tmem79 protein_coding protein_coding MGP_LPJ_T0063999.1 MGP_LPJ_G0027879.1 mouse_genomes_project 3 149522075 149549964 - MGP_LPJ_P0063999 Clca3a1 protein_coding protein_coding MGP_LPJ_T0013948.1 MGP_LPJ_G0012039.1 mouse_genomes_project 3 34399232 34400221 + processed_pseudogene processed_pseudogene MGP_LPJ_T0059926.1 MGP_LPJ_G0027005.1 mouse_genomes_project 3 7840813 7845586 - Zfand1 protein_coding retained_intron MGP_LPJ_T0059927.1 MGP_LPJ_G0027005.1 mouse_genomes_project 3 7840833 7855452 - MGP_LPJ_P0059927 Zfand1 protein_coding protein_coding MGP_LPJ_T0059928.1 MGP_LPJ_G0027005.1 mouse_genomes_project 3 7841540 7855444 - MGP_LPJ_P0059928 Zfand1 protein_coding nonsense_mediated_decay MGP_LPJ_T0059929.1 MGP_LPJ_G0027005.1 mouse_genomes_project 3 7841675 7852752 - MGP_LPJ_P0059929 Zfand1 protein_coding protein_coding MGP_LPJ_T0059930.1 MGP_LPJ_G0027005.1 mouse_genomes_project 3 7845516 7847070 - Zfand1 protein_coding retained_intron MGP_LPJ_T0059931.1 MGP_LPJ_G0027005.1 mouse_genomes_project 3 7846790 7855441 - Zfand1 protein_coding processed_transcript MGP_LPJ_T0059932.1 MGP_LPJ_G0027005.1 mouse_genomes_project 3 7854617 7855443 - Zfand1 protein_coding processed_transcript MGP_LPJ_T0001192.1 MGP_LPJ_G0001114.1 mouse_genomes_project 3 36652852 36653408 + TEC TEC MGP_LPJ_T0001280.1 MGP_LPJ_G0001200.1 mouse_genomes_project 3 78155077 78161458 - TEC TEC MGP_LPJ_T0061617.1 MGP_LPJ_G0027354.1 mouse_genomes_project 3 90442971 90456436 + MGP_LPJ_P0061617 Clk2 protein_coding protein_coding MGP_LPJ_T0061618.1 MGP_LPJ_G0027354.1 mouse_genomes_project 3 90442993 90445381 + MGP_LPJ_P0061618 Clk2 protein_coding protein_coding MGP_LPJ_T0061619.1 MGP_LPJ_G0027354.1 mouse_genomes_project 3 90442994 90456436 + MGP_LPJ_P0061619 Clk2 protein_coding protein_coding MGP_LPJ_T0061620.1 MGP_LPJ_G0027354.1 mouse_genomes_project 3 90442995 90456434 + Clk2 protein_coding retained_intron MGP_LPJ_T0061621.1 MGP_LPJ_G0027354.1 mouse_genomes_project 3 90442995 90452972 + MGP_LPJ_P0061621 Clk2 protein_coding protein_coding MGP_LPJ_T0061622.1 MGP_LPJ_G0027354.1 mouse_genomes_project 3 90443016 90456436 + MGP_LPJ_P0061622 Clk2 protein_coding protein_coding MGP_LPJ_T0061623.1 MGP_LPJ_G0027354.1 mouse_genomes_project 3 90443155 90456436 + MGP_LPJ_P0061623 Clk2 protein_coding nonsense_mediated_decay MGP_LPJ_T0061624.1 MGP_LPJ_G0027354.1 mouse_genomes_project 3 90445340 90448586 + Clk2 protein_coding retained_intron MGP_LPJ_T0061625.1 MGP_LPJ_G0027354.1 mouse_genomes_project 3 90451679 90455595 + Clk2 protein_coding retained_intron MGP_LPJ_T0061626.1 MGP_LPJ_G0027354.1 mouse_genomes_project 3 90453469 90455262 + Clk2 protein_coding retained_intron MGP_LPJ_T0061627.1 MGP_LPJ_G0027354.1 mouse_genomes_project 3 90454549 90455486 + Clk2 protein_coding processed_transcript MGP_LPJ_T0059913.1 MGP_LPJ_G0027000.1 mouse_genomes_project 3 7692014 7696503 - MGP_LPJ_P0059913 Fabp4 protein_coding protein_coding MGP_LPJ_T0059914.1 MGP_LPJ_G0027000.1 mouse_genomes_project 3 7692254 7696485 - Fabp4 protein_coding retained_intron MGP_LPJ_T0099407.1 MGP_LPJ_G0037670.1 mouse_genomes_project 3 86865985 86866092 - Gm26204 snRNA snRNA MGP_LPJ_T0014150.1 MGP_LPJ_G0012241.1 mouse_genomes_project 3 97886918 97887813 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098589.1 MGP_LPJ_G0036863.1 mouse_genomes_project 3 108801033 108802556 - Gm42721 sense_intronic sense_intronic MGP_LPJ_T0102091.1 MGP_LPJ_G0040128.1 mouse_genomes_project 3 79708542 79709068 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0062295.1 MGP_LPJ_G0027518.1 mouse_genomes_project 3 97698466 97699464 + Ensa protein_coding TEC MGP_LPJ_T0062296.1 MGP_LPJ_G0027518.1 mouse_genomes_project 3 97698484 97705576 + MGP_LPJ_P0062296 Ensa protein_coding protein_coding MGP_LPJ_T0062297.1 MGP_LPJ_G0027518.1 mouse_genomes_project 3 97698493 97705576 + MGP_LPJ_P0062297 Ensa protein_coding protein_coding MGP_LPJ_T0062298.1 MGP_LPJ_G0027518.1 mouse_genomes_project 3 97698499 97701008 + Ensa protein_coding retained_intron MGP_LPJ_T0064315.1 MGP_LPJ_G0027933.1 mouse_genomes_project 3 160132471 160410220 - MGP_LPJ_P0064315 Tnni3k protein_coding nonsense_mediated_decay MGP_LPJ_T0064316.1 MGP_LPJ_G0027933.1 mouse_genomes_project 3 160132479 160410220 - MGP_LPJ_P0064316 Tnni3k protein_coding protein_coding MGP_LPJ_T0064317.1 MGP_LPJ_G0027933.1 mouse_genomes_project 3 160385645 160410163 - Tnni3k protein_coding retained_intron MGP_LPJ_T0101539.1 MGP_LPJ_G0039651.1 mouse_genomes_project 3 58410236 58414685 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101540.1 MGP_LPJ_G0039651.1 mouse_genomes_project 3 58411971 58436539 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0060698.1 MGP_LPJ_G0027151.1 mouse_genomes_project 3 54116049 54117227 - MGP_LPJ_P0060698 Gm21958 protein_coding protein_coding MGP_LPJ_T0011557.1 MGP_LPJ_G0009675.1 mouse_genomes_project 3 83601795 83602037 - Gm22038 misc_RNA misc_RNA MGP_LPJ_T0013877.1 MGP_LPJ_G0011968.1 mouse_genomes_project 3 7557015 7557115 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010538.1 MGP_LPJ_G0008656.1 mouse_genomes_project 3 69167797 69167892 + Mir16-2 miRNA miRNA MGP_LPJ_T0059987.1 MGP_LPJ_G0027027.1 mouse_genomes_project 3 16957315 16992135 - MGP_LPJ_P0059987 Armc1 protein_coding protein_coding MGP_LPJ_T0007651.1 MGP_LPJ_G0006259.1 mouse_genomes_project 3 101474402 101478325 + Gm12440 lincRNA lincRNA MGP_LPJ_T0014120.1 MGP_LPJ_G0012211.1 mouse_genomes_project 3 89758356 89759498 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102090.1 MGP_LPJ_G0040127.1 mouse_genomes_project 3 79708542 79709106 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0014239.1 MGP_LPJ_G0012330.1 mouse_genomes_project 3 124972583 124973355 + processed_pseudogene processed_pseudogene MGP_LPJ_T0063361.1 MGP_LPJ_G0027762.1 mouse_genomes_project 3 125699086 125721069 + MGP_LPJ_P0063361 Arhgap29 protein_coding protein_coding MGP_LPJ_T0063362.1 MGP_LPJ_G0027762.1 mouse_genomes_project 3 125699774 125770564 + MGP_LPJ_P0063362 Arhgap29 protein_coding protein_coding MGP_LPJ_T0063363.1 MGP_LPJ_G0027762.1 mouse_genomes_project 3 125699775 125738606 + MGP_LPJ_P0063363 Arhgap29 protein_coding protein_coding MGP_LPJ_T0063364.1 MGP_LPJ_G0027762.1 mouse_genomes_project 3 125714980 125742471 + MGP_LPJ_P0063364 Arhgap29 protein_coding protein_coding MGP_LPJ_T0063365.1 MGP_LPJ_G0027762.1 mouse_genomes_project 3 125714980 125763725 + MGP_LPJ_P0063365 Arhgap29 protein_coding protein_coding MGP_LPJ_T0063366.1 MGP_LPJ_G0027762.1 mouse_genomes_project 3 125721134 125768786 + MGP_LPJ_P0063366 Arhgap29 protein_coding protein_coding MGP_LPJ_T0063367.1 MGP_LPJ_G0027762.1 mouse_genomes_project 3 125731238 125742566 + Arhgap29 protein_coding retained_intron MGP_LPJ_T0063368.1 MGP_LPJ_G0027762.1 mouse_genomes_project 3 125738558 125742240 + Arhgap29 protein_coding retained_intron MGP_LPJ_T0063369.1 MGP_LPJ_G0027762.1 mouse_genomes_project 3 125754161 125759615 + Arhgap29 protein_coding retained_intron MGP_LPJ_T0063300.1 MGP_LPJ_G0027752.1 mouse_genomes_project 3 122159007 123076129 + MGP_LPJ_P0063300 Dpyd protein_coding protein_coding MGP_LPJ_T0063301.1 MGP_LPJ_G0027752.1 mouse_genomes_project 3 122159008 122404432 + Dpyd protein_coding retained_intron MGP_LPJ_T0063302.1 MGP_LPJ_G0027752.1 mouse_genomes_project 3 122159055 122388143 + Dpyd protein_coding retained_intron MGP_LPJ_T0063303.1 MGP_LPJ_G0027752.1 mouse_genomes_project 3 122159058 122277553 + MGP_LPJ_P0063303 Dpyd protein_coding protein_coding MGP_LPJ_T0063304.1 MGP_LPJ_G0027752.1 mouse_genomes_project 3 122159064 122160031 + Dpyd protein_coding retained_intron MGP_LPJ_T0063305.1 MGP_LPJ_G0027752.1 mouse_genomes_project 3 122417214 122511593 + Dpyd protein_coding retained_intron MGP_LPJ_T0062341.1 MGP_LPJ_G0027524.1 mouse_genomes_project 3 97919203 97947515 - MGP_LPJ_P0062341 Prpf3 protein_coding protein_coding MGP_LPJ_T0062342.1 MGP_LPJ_G0027524.1 mouse_genomes_project 3 97919668 97924744 - MGP_LPJ_P0062342 Prpf3 protein_coding protein_coding MGP_LPJ_T0062343.1 MGP_LPJ_G0027524.1 mouse_genomes_project 3 97919697 97940231 - Prpf3 protein_coding retained_intron MGP_LPJ_T0062344.1 MGP_LPJ_G0027524.1 mouse_genomes_project 3 97919701 97921887 - Prpf3 protein_coding retained_intron MGP_LPJ_T0062345.1 MGP_LPJ_G0027524.1 mouse_genomes_project 3 97919701 97947383 - MGP_LPJ_P0062345 Prpf3 protein_coding protein_coding MGP_LPJ_T0062346.1 MGP_LPJ_G0027524.1 mouse_genomes_project 3 97925567 97935784 - Prpf3 protein_coding processed_transcript MGP_LPJ_T0062347.1 MGP_LPJ_G0027524.1 mouse_genomes_project 3 97934421 97936793 - Prpf3 protein_coding retained_intron MGP_LPJ_T0062348.1 MGP_LPJ_G0027524.1 mouse_genomes_project 3 97938099 97945176 - MGP_LPJ_P0062348 Prpf3 protein_coding nonsense_mediated_decay MGP_LPJ_T0062349.1 MGP_LPJ_G0027524.1 mouse_genomes_project 3 97940192 97947411 - Prpf3 protein_coding retained_intron MGP_LPJ_T0014298.1 MGP_LPJ_G0012389.1 mouse_genomes_project 3 141350960 141351276 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010549.1 MGP_LPJ_G0008667.1 mouse_genomes_project 3 90509242 90509325 - Mir92b miRNA miRNA MGP_LPJ_T0001321.1 MGP_LPJ_G0001241.1 mouse_genomes_project 3 119572589 119573617 + TEC TEC MGP_LPJ_T0001373.1 MGP_LPJ_G0001292.1 mouse_genomes_project 3 133533340 133539369 + TEC TEC MGP_LPJ_T0061138.1 MGP_LPJ_G0027255.1 mouse_genomes_project 3 81423844 81550827 - MGP_LPJ_P0061138 Gria2 protein_coding protein_coding MGP_LPJ_T0061139.1 MGP_LPJ_G0027255.1 mouse_genomes_project 3 81431187 81550827 - MGP_LPJ_P0061139 Gria2 protein_coding protein_coding MGP_LPJ_T0061140.1 MGP_LPJ_G0027255.1 mouse_genomes_project 3 81431432 81550571 - MGP_LPJ_P0061140 Gria2 protein_coding nonsense_mediated_decay MGP_LPJ_T0061141.1 MGP_LPJ_G0027255.1 mouse_genomes_project 3 81434894 81550783 - Gria2 protein_coding retained_intron MGP_LPJ_T0061142.1 MGP_LPJ_G0027255.1 mouse_genomes_project 3 81450708 81550642 - Gria2 protein_coding retained_intron MGP_LPJ_T0061143.1 MGP_LPJ_G0027255.1 mouse_genomes_project 3 81452195 81550716 - Gria2 protein_coding retained_intron MGP_LPJ_T0061144.1 MGP_LPJ_G0027255.1 mouse_genomes_project 3 81453435 81550772 - Gria2 protein_coding retained_intron MGP_LPJ_T0061145.1 MGP_LPJ_G0027255.1 mouse_genomes_project 3 81548050 81550685 - Gria2 protein_coding retained_intron MGP_LPJ_T0102079.1 MGP_LPJ_G0040116.1 mouse_genomes_project 3 12489747 12520744 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0007792.1 MGP_LPJ_G0006371.1 mouse_genomes_project 3 156488770 156493046 + Gm42949 lincRNA lincRNA MGP_LPJ_T0098709.1 MGP_LPJ_G0036973.1 mouse_genomes_project 3 64978794 65248532 + sense_overlapping sense_overlapping MGP_LPJ_T0010517.1 MGP_LPJ_G0008635.1 mouse_genomes_project 3 18085988 18086058 - Mir7007 miRNA miRNA MGP_LPJ_T0014179.1 MGP_LPJ_G0012270.1 mouse_genomes_project 3 105260862 105260989 - processed_pseudogene processed_pseudogene MGP_LPJ_T0059971.1 MGP_LPJ_G0027019.1 mouse_genomes_project 3 13309897 13355176 - protein_coding retained_intron MGP_LPJ_T0059976.1 MGP_LPJ_G0027019.1 mouse_genomes_project 3 13312012 13355143 - MGP_LPJ_P0059976 protein_coding protein_coding MGP_LPJ_T0062459.1 MGP_LPJ_G0027557.1 mouse_genomes_project 3 98879221 98881702 - MGP_LPJ_P0062459 Nudt17 protein_coding protein_coding MGP_LPJ_T0062460.1 MGP_LPJ_G0027557.1 mouse_genomes_project 3 98879222 98880398 - Nudt17 protein_coding retained_intron MGP_LPJ_T0062461.1 MGP_LPJ_G0027557.1 mouse_genomes_project 3 98879223 98881717 - MGP_LPJ_P0062461 Nudt17 protein_coding protein_coding MGP_LPJ_T0062462.1 MGP_LPJ_G0027557.1 mouse_genomes_project 3 98879322 98881694 - MGP_LPJ_P0062462 Nudt17 protein_coding protein_coding MGP_LPJ_T0001415.1 MGP_LPJ_G0001334.1 mouse_genomes_project 3 158739728 158740639 - TEC TEC MGP_LPJ_T0098248.1 MGP_LPJ_G0036529.1 mouse_genomes_project 3 51076555 51076672 + n-R5s196 rRNA rRNA MGP_LPJ_T0007562.1 MGP_LPJ_G0006193.1 mouse_genomes_project 3 52211393 52223730 - lincRNA lincRNA MGP_LPJ_T0001274.1 MGP_LPJ_G0001194.1 mouse_genomes_project 3 73533119 73535244 + TEC TEC MGP_LPJ_T0062180.1 MGP_LPJ_G0027497.1 mouse_genomes_project 3 97108324 97112945 + MGP_LPJ_P0062180 Tmod4 protein_coding protein_coding MGP_LPJ_T0062181.1 MGP_LPJ_G0027497.1 mouse_genomes_project 3 97108362 97114501 + MGP_LPJ_P0062181 Tmod4 protein_coding protein_coding MGP_LPJ_T0062182.1 MGP_LPJ_G0027497.1 mouse_genomes_project 3 97108363 97114497 + MGP_LPJ_P0062182 Tmod4 protein_coding protein_coding MGP_LPJ_T0062183.1 MGP_LPJ_G0027497.1 mouse_genomes_project 3 97110052 97114036 + Tmod4 protein_coding retained_intron MGP_LPJ_T0062184.1 MGP_LPJ_G0027497.1 mouse_genomes_project 3 97112461 97113158 + Tmod4 protein_coding processed_transcript MGP_LPJ_T0062185.1 MGP_LPJ_G0027497.1 mouse_genomes_project 3 97112944 97114500 + Tmod4 protein_coding retained_intron MGP_LPJ_T0014021.1 MGP_LPJ_G0012112.1 mouse_genomes_project 3 57973607 57974024 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062659.1 MGP_LPJ_G0027610.1 mouse_genomes_project 3 105352277 105356684 - Tshb protein_coding retained_intron MGP_LPJ_T0062660.1 MGP_LPJ_G0027610.1 mouse_genomes_project 3 105354209 105359178 - MGP_LPJ_P0062660 Tshb protein_coding protein_coding MGP_LPJ_T0062661.1 MGP_LPJ_G0027610.1 mouse_genomes_project 3 105354209 105359138 - MGP_LPJ_P0062661 Tshb protein_coding protein_coding MGP_LPJ_T0062662.1 MGP_LPJ_G0027610.1 mouse_genomes_project 3 105354218 105359182 - MGP_LPJ_P0062662 Tshb protein_coding protein_coding MGP_LPJ_T0062663.1 MGP_LPJ_G0027610.1 mouse_genomes_project 3 105354230 105359138 - MGP_LPJ_P0062663 Tshb protein_coding protein_coding MGP_LPJ_T0062664.1 MGP_LPJ_G0027610.1 mouse_genomes_project 3 105354257 105358947 - MGP_LPJ_P0062664 Tshb protein_coding protein_coding MGP_LPJ_T0062023.1 MGP_LPJ_G0027462.1 mouse_genomes_project 3 94725075 94726558 - MGP_LPJ_P0062023 Crct1 protein_coding protein_coding MGP_LPJ_T0062024.1 MGP_LPJ_G0027462.1 mouse_genomes_project 3 94725389 94726540 - MGP_LPJ_P0062024 Crct1 protein_coding protein_coding MGP_LPJ_T0014260.1 MGP_LPJ_G0012351.1 mouse_genomes_project 3 132374811 132375245 - processed_pseudogene processed_pseudogene MGP_LPJ_T0062101.1 MGP_LPJ_G0027486.1 mouse_genomes_project 3 96618951 96633874 + protein_coding retained_intron MGP_LPJ_T0062102.1 MGP_LPJ_G0027486.1 mouse_genomes_project 3 96618953 96623737 + MGP_LPJ_P0062102 protein_coding protein_coding MGP_LPJ_T0062103.1 MGP_LPJ_G0027486.1 mouse_genomes_project 3 96619032 96908082 + MGP_LPJ_P0062103 protein_coding nonsense_mediated_decay MGP_LPJ_T0062104.1 MGP_LPJ_G0027486.1 mouse_genomes_project 3 96619044 96623744 + MGP_LPJ_P0062104 protein_coding protein_coding MGP_LPJ_T0014340.1 MGP_LPJ_G0012431.1 mouse_genomes_project 3 163370578 163370988 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007768.1 MGP_LPJ_G0006356.1 mouse_genomes_project 3 149028747 149030290 + Gm43447 lincRNA lincRNA MGP_LPJ_T0014218.1 MGP_LPJ_G0012309.1 mouse_genomes_project 3 116352492 116353322 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007467.1 MGP_LPJ_G0006124.1 mouse_genomes_project 3 7489095 7492089 - Gm38335 lincRNA lincRNA MGP_LPJ_T0014041.1 MGP_LPJ_G0012132.1 mouse_genomes_project 3 63730546 63731500 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014144.1 MGP_LPJ_G0012235.1 mouse_genomes_project 3 96773418 96774247 + processed_pseudogene processed_pseudogene MGP_LPJ_T0060455.1 MGP_LPJ_G0027110.1 mouse_genomes_project 3 36057978 36224291 + MGP_LPJ_P0060455 Spata5 protein_coding protein_coding MGP_LPJ_T0060456.1 MGP_LPJ_G0027110.1 mouse_genomes_project 3 36058390 36224291 + MGP_LPJ_P0060456 Spata5 protein_coding protein_coding MGP_LPJ_T0060457.1 MGP_LPJ_G0027110.1 mouse_genomes_project 3 36058404 36224291 + MGP_LPJ_P0060457 Spata5 protein_coding protein_coding MGP_LPJ_T0060458.1 MGP_LPJ_G0027110.1 mouse_genomes_project 3 36058465 36063586 + Spata5 protein_coding processed_transcript MGP_LPJ_T0060459.1 MGP_LPJ_G0027110.1 mouse_genomes_project 3 36058944 36064348 + Spata5 protein_coding processed_transcript MGP_LPJ_T0060460.1 MGP_LPJ_G0027110.1 mouse_genomes_project 3 36070468 36077570 + Spata5 protein_coding processed_transcript MGP_LPJ_T0060461.1 MGP_LPJ_G0027110.1 mouse_genomes_project 3 36074984 36077690 + Spata5 protein_coding retained_intron MGP_LPJ_T0060462.1 MGP_LPJ_G0027110.1 mouse_genomes_project 3 36089987 36173293 + Spata5 protein_coding retained_intron MGP_LPJ_T0060463.1 MGP_LPJ_G0027110.1 mouse_genomes_project 3 36135314 36224204 + Spata5 protein_coding processed_transcript MGP_LPJ_T0060464.1 MGP_LPJ_G0027110.1 mouse_genomes_project 3 36218803 36224285 + Spata5 protein_coding processed_transcript MGP_LPJ_T0007668.1 MGP_LPJ_G0006274.1 mouse_genomes_project 3 108597879 108599696 + Gm5547 lincRNA lincRNA MGP_LPJ_T0007669.1 MGP_LPJ_G0006274.1 mouse_genomes_project 3 108597906 108599689 + Gm5547 lincRNA lincRNA MGP_LPJ_T0007670.1 MGP_LPJ_G0006274.1 mouse_genomes_project 3 108598952 108599697 + Gm5547 lincRNA lincRNA MGP_LPJ_T0098542.1 MGP_LPJ_G0036816.1 mouse_genomes_project 3 96459280 96460535 - Gm43768 sense_intronic sense_intronic MGP_LPJ_T0014050.1 MGP_LPJ_G0012141.1 mouse_genomes_project 3 66157403 66157662 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017905.1 MGP_LPJ_G0015421.1 mouse_genomes_project 3 82710727 82717028 - Gm9989 processed_transcript lincRNA MGP_LPJ_T0017906.1 MGP_LPJ_G0015421.1 mouse_genomes_project 3 82713897 82717093 - Gm9989 processed_transcript retained_intron MGP_LPJ_T0061651.1 MGP_LPJ_G0027358.1 mouse_genomes_project 3 90490498 90495313 - MGP_LPJ_P0061651 Mtx1 protein_coding protein_coding MGP_LPJ_T0061652.1 MGP_LPJ_G0027358.1 mouse_genomes_project 3 90490500 90495850 - MGP_LPJ_P0061652 Mtx1 protein_coding protein_coding MGP_LPJ_T0061653.1 MGP_LPJ_G0027358.1 mouse_genomes_project 3 90490505 90491756 - MGP_LPJ_P0061653 Mtx1 protein_coding protein_coding MGP_LPJ_T0061654.1 MGP_LPJ_G0027358.1 mouse_genomes_project 3 90490506 90491084 - Mtx1 protein_coding retained_intron MGP_LPJ_T0061655.1 MGP_LPJ_G0027358.1 mouse_genomes_project 3 90490506 90491514 - Mtx1 protein_coding processed_transcript MGP_LPJ_T0061656.1 MGP_LPJ_G0027358.1 mouse_genomes_project 3 90490506 90495777 - MGP_LPJ_P0061656 Mtx1 protein_coding protein_coding MGP_LPJ_T0061657.1 MGP_LPJ_G0027358.1 mouse_genomes_project 3 90490508 90491541 - MGP_LPJ_P0061657 Mtx1 protein_coding nonsense_mediated_decay MGP_LPJ_T0061658.1 MGP_LPJ_G0027358.1 mouse_genomes_project 3 90490511 90495327 - MGP_LPJ_P0061658 Mtx1 protein_coding protein_coding MGP_LPJ_T0061659.1 MGP_LPJ_G0027358.1 mouse_genomes_project 3 90490632 90495260 - MGP_LPJ_P0061659 Mtx1 protein_coding protein_coding MGP_LPJ_T0061660.1 MGP_LPJ_G0027358.1 mouse_genomes_project 3 90490747 90495332 - MGP_LPJ_P0061660 Mtx1 protein_coding nonsense_mediated_decay MGP_LPJ_T0061661.1 MGP_LPJ_G0027358.1 mouse_genomes_project 3 90490775 90509179 - MGP_LPJ_P0061661 Mtx1 protein_coding protein_coding MGP_LPJ_T0061662.1 MGP_LPJ_G0027358.1 mouse_genomes_project 3 90490833 90492256 - Mtx1 protein_coding retained_intron MGP_LPJ_T0061663.1 MGP_LPJ_G0027358.1 mouse_genomes_project 3 90491065 90492143 - Mtx1 protein_coding retained_intron MGP_LPJ_T0061664.1 MGP_LPJ_G0027358.1 mouse_genomes_project 3 90491164 90495282 - Mtx1 protein_coding retained_intron MGP_LPJ_T0061665.1 MGP_LPJ_G0027358.1 mouse_genomes_project 3 90491451 90495305 - MGP_LPJ_P0061665 Mtx1 protein_coding nonsense_mediated_decay MGP_LPJ_T0061666.1 MGP_LPJ_G0027358.1 mouse_genomes_project 3 90491679 90495297 - Mtx1 protein_coding retained_intron MGP_LPJ_T0061667.1 MGP_LPJ_G0027358.1 mouse_genomes_project 3 90492095 90495246 - MGP_LPJ_P0061667 Mtx1 protein_coding nonsense_mediated_decay MGP_LPJ_T0061674.1 MGP_LPJ_G0027358.1 mouse_genomes_project 3 90506235 90509215 - Mtx1 protein_coding processed_transcript MGP_LPJ_T0064009.1 MGP_LPJ_G0027885.1 mouse_genomes_project 3 149903675 149907469 + Odf2l protein_coding retained_intron MGP_LPJ_T0064010.1 MGP_LPJ_G0027885.1 mouse_genomes_project 3 149903676 149940486 + MGP_LPJ_P0064010 Odf2l protein_coding protein_coding MGP_LPJ_T0064011.1 MGP_LPJ_G0027885.1 mouse_genomes_project 3 149903676 149940466 + MGP_LPJ_P0064011 Odf2l protein_coding protein_coding MGP_LPJ_T0064012.1 MGP_LPJ_G0027885.1 mouse_genomes_project 3 149903687 149922459 + Odf2l protein_coding retained_intron MGP_LPJ_T0064013.1 MGP_LPJ_G0027885.1 mouse_genomes_project 3 149903687 149940456 + MGP_LPJ_P0064013 Odf2l protein_coding protein_coding MGP_LPJ_T0064014.1 MGP_LPJ_G0027885.1 mouse_genomes_project 3 149903695 149922370 + Odf2l protein_coding retained_intron MGP_LPJ_T0064015.1 MGP_LPJ_G0027885.1 mouse_genomes_project 3 149903707 149940460 + MGP_LPJ_P0064015 Odf2l protein_coding protein_coding MGP_LPJ_T0064016.1 MGP_LPJ_G0027885.1 mouse_genomes_project 3 149903708 149914089 + MGP_LPJ_P0064016 Odf2l protein_coding nonsense_mediated_decay MGP_LPJ_T0064017.1 MGP_LPJ_G0027885.1 mouse_genomes_project 3 149904061 149904717 + Odf2l protein_coding processed_transcript MGP_LPJ_T0064018.1 MGP_LPJ_G0027885.1 mouse_genomes_project 3 149904061 149911229 + MGP_LPJ_P0064018 Odf2l protein_coding protein_coding MGP_LPJ_T0064019.1 MGP_LPJ_G0027885.1 mouse_genomes_project 3 149905733 149914081 + MGP_LPJ_P0064019 Odf2l protein_coding protein_coding MGP_LPJ_T0064020.1 MGP_LPJ_G0027885.1 mouse_genomes_project 3 149912944 149930146 + MGP_LPJ_P0064020 Odf2l protein_coding protein_coding MGP_LPJ_T0064021.1 MGP_LPJ_G0027885.1 mouse_genomes_project 3 149917698 149935663 + Odf2l protein_coding retained_intron MGP_LPJ_T0064022.1 MGP_LPJ_G0027885.1 mouse_genomes_project 3 149924633 149935663 + Odf2l protein_coding retained_intron MGP_LPJ_T0064023.1 MGP_LPJ_G0027885.1 mouse_genomes_project 3 149924842 149932476 + Odf2l protein_coding processed_transcript MGP_LPJ_T0064024.1 MGP_LPJ_G0027885.1 mouse_genomes_project 3 149924851 149940464 + Odf2l protein_coding retained_intron MGP_LPJ_T0064025.1 MGP_LPJ_G0027885.1 mouse_genomes_project 3 149924873 149935615 + MGP_LPJ_P0064025 Odf2l protein_coding protein_coding MGP_LPJ_T0064026.1 MGP_LPJ_G0027885.1 mouse_genomes_project 3 149935603 149940197 + MGP_LPJ_P0064026 Odf2l protein_coding nonsense_mediated_decay MGP_LPJ_T0062840.1 MGP_LPJ_G0027642.1 mouse_genomes_project 3 107815100 107827063 + MGP_LPJ_P0062840 4930564D02Rik protein_coding protein_coding MGP_LPJ_T0099408.1 MGP_LPJ_G0037671.1 mouse_genomes_project 3 86924946 86925008 - Gm24501 snRNA snRNA MGP_LPJ_T0062721.1 MGP_LPJ_G0027619.1 mouse_genomes_project 3 105870075 105970492 + MGP_LPJ_P0062721 Trim33 protein_coding protein_coding MGP_LPJ_T0062722.1 MGP_LPJ_G0027619.1 mouse_genomes_project 3 105870636 105967061 + MGP_LPJ_P0062722 Trim33 protein_coding protein_coding MGP_LPJ_T0062723.1 MGP_LPJ_G0027619.1 mouse_genomes_project 3 105916555 105934269 + MGP_LPJ_P0062723 Trim33 protein_coding protein_coding MGP_LPJ_T0062724.1 MGP_LPJ_G0027619.1 mouse_genomes_project 3 105926557 105931522 + Trim33 protein_coding retained_intron MGP_LPJ_T0062725.1 MGP_LPJ_G0027619.1 mouse_genomes_project 3 105931179 105932529 + Trim33 protein_coding retained_intron MGP_LPJ_T0062726.1 MGP_LPJ_G0027619.1 mouse_genomes_project 3 105931271 105965040 + MGP_LPJ_P0062726 Trim33 protein_coding nonsense_mediated_decay MGP_LPJ_T0062727.1 MGP_LPJ_G0027619.1 mouse_genomes_project 3 105947467 105967277 + MGP_LPJ_P0062727 Trim33 protein_coding protein_coding MGP_LPJ_T0061056.1 MGP_LPJ_G0027235.1 mouse_genomes_project 3 70227143 70250823 + MGP_LPJ_P0061056 Otol1 protein_coding protein_coding MGP_LPJ_T0063869.1 MGP_LPJ_G0027855.1 mouse_genomes_project 3 142852954 142856475 + Adh4 protein_coding processed_transcript MGP_LPJ_T0063870.1 MGP_LPJ_G0027855.1 mouse_genomes_project 3 142852975 142862668 + MGP_LPJ_P0063870 Adh4 protein_coding protein_coding MGP_LPJ_T0063871.1 MGP_LPJ_G0027855.1 mouse_genomes_project 3 142852983 142872260 + MGP_LPJ_P0063871 Adh4 protein_coding protein_coding MGP_LPJ_T0017927.1 MGP_LPJ_G0015432.1 mouse_genomes_project 3 108750778 108775852 + Gm42890 processed_transcript retained_intron MGP_LPJ_T0017928.1 MGP_LPJ_G0015432.1 mouse_genomes_project 3 108757390 108767677 + Gm42890 processed_transcript retained_intron MGP_LPJ_T0010580.1 MGP_LPJ_G0008698.1 mouse_genomes_project 3 142209417 142209498 - Mir6380 miRNA miRNA MGP_LPJ_T0014010.1 MGP_LPJ_G0012101.1 mouse_genomes_project 3 56650071 56651407 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098595.1 MGP_LPJ_G0036869.1 mouse_genomes_project 3 158554598 158556741 - 1700012D16Rik sense_intronic sense_intronic MGP_LPJ_T0063440.1 MGP_LPJ_G0027776.1 mouse_genomes_project 3 127204067 127222153 - MGP_LPJ_P0063440 Mettl14 protein_coding protein_coding MGP_LPJ_T0063441.1 MGP_LPJ_G0027776.1 mouse_genomes_project 3 127204067 127221976 - MGP_LPJ_P0063441 Mettl14 protein_coding protein_coding MGP_LPJ_T0063442.1 MGP_LPJ_G0027776.1 mouse_genomes_project 3 127204067 127222030 - MGP_LPJ_P0063442 Mettl14 protein_coding protein_coding MGP_LPJ_T0063443.1 MGP_LPJ_G0027776.1 mouse_genomes_project 3 127205242 127210828 - MGP_LPJ_P0063443 Mettl14 protein_coding protein_coding MGP_LPJ_T0063444.1 MGP_LPJ_G0027776.1 mouse_genomes_project 3 127221761 127222143 - Mettl14 protein_coding retained_intron MGP_LPJ_T0064227.1 MGP_LPJ_G0027919.1 mouse_genomes_project 3 157624224 157693342 + MGP_LPJ_P0064227 Zzz3 protein_coding protein_coding MGP_LPJ_T0064228.1 MGP_LPJ_G0027919.1 mouse_genomes_project 3 157624276 157660749 + Zzz3 protein_coding retained_intron MGP_LPJ_T0064229.1 MGP_LPJ_G0027919.1 mouse_genomes_project 3 157624754 157696696 + MGP_LPJ_P0064229 Zzz3 protein_coding protein_coding MGP_LPJ_T0064230.1 MGP_LPJ_G0027919.1 mouse_genomes_project 3 157624783 157681941 + Zzz3 protein_coding processed_transcript MGP_LPJ_T0064231.1 MGP_LPJ_G0027919.1 mouse_genomes_project 3 157624830 157681639 + Zzz3 protein_coding processed_transcript MGP_LPJ_T0064232.1 MGP_LPJ_G0027919.1 mouse_genomes_project 3 157624882 157693420 + MGP_LPJ_P0064232 Zzz3 protein_coding protein_coding MGP_LPJ_T0064233.1 MGP_LPJ_G0027919.1 mouse_genomes_project 3 157625429 157693345 + MGP_LPJ_P0064233 Zzz3 protein_coding protein_coding MGP_LPJ_T0064234.1 MGP_LPJ_G0027919.1 mouse_genomes_project 3 157625439 157696696 + MGP_LPJ_P0064234 Zzz3 protein_coding protein_coding MGP_LPJ_T0064235.1 MGP_LPJ_G0027919.1 mouse_genomes_project 3 157668793 157671983 + Zzz3 protein_coding retained_intron MGP_LPJ_T0064236.1 MGP_LPJ_G0027919.1 mouse_genomes_project 3 157691284 157692686 + Zzz3 protein_coding processed_transcript MGP_LPJ_T0001286.1 MGP_LPJ_G0001206.1 mouse_genomes_project 3 85791777 85795683 + TEC TEC MGP_LPJ_T0014141.1 MGP_LPJ_G0012232.1 mouse_genomes_project 3 95253588 95254045 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010532.1 MGP_LPJ_G0008650.1 mouse_genomes_project 3 39313666 39313740 + Gm23810 miRNA miRNA MGP_LPJ_T0007804.1 MGP_LPJ_G0006379.1 mouse_genomes_project 3 163180919 163186781 - Gm33466 lincRNA lincRNA MGP_LPJ_T0062962.1 MGP_LPJ_G0027678.1 mouse_genomes_project 3 110540657 110542207 - Strip1 protein_coding retained_intron MGP_LPJ_T0062963.1 MGP_LPJ_G0027678.1 mouse_genomes_project 3 110540657 110559819 - MGP_LPJ_P0062963 Strip1 protein_coding protein_coding MGP_LPJ_T0062964.1 MGP_LPJ_G0027678.1 mouse_genomes_project 3 110540660 110554970 - Strip1 protein_coding processed_transcript MGP_LPJ_T0062965.1 MGP_LPJ_G0027678.1 mouse_genomes_project 3 110545019 110548201 - Strip1 protein_coding processed_transcript MGP_LPJ_T0062966.1 MGP_LPJ_G0027678.1 mouse_genomes_project 3 110548577 110559819 - Strip1 protein_coding retained_intron MGP_LPJ_T0004321.1 MGP_LPJ_G0003792.1 mouse_genomes_project 3 98284537 98289488 - Gm17690 antisense antisense MGP_LPJ_T0004322.1 MGP_LPJ_G0003792.1 mouse_genomes_project 3 98288448 98289490 - Gm17690 antisense antisense MGP_LPJ_T0061125.1 MGP_LPJ_G0027252.1 mouse_genomes_project 3 80312896 80412059 - MGP_LPJ_P0061125 Rxfp1 protein_coding protein_coding MGP_LPJ_T0061126.1 MGP_LPJ_G0027252.1 mouse_genomes_project 3 80315404 80412145 - MGP_LPJ_P0061126 Rxfp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0061127.1 MGP_LPJ_G0027252.1 mouse_genomes_project 3 80322714 80324598 - Rxfp1 protein_coding retained_intron MGP_LPJ_T0061128.1 MGP_LPJ_G0027252.1 mouse_genomes_project 3 80326379 80341323 - Rxfp1 protein_coding processed_transcript MGP_LPJ_T0013854.1 MGP_LPJ_G0011945.1 mouse_genomes_project 3 1948274 1949463 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004262.1 MGP_LPJ_G0003751.1 mouse_genomes_project 3 54485848 54515618 + 4931419H13Rik antisense antisense MGP_LPJ_T0060715.1 MGP_LPJ_G0027155.1 mouse_genomes_project 3 54223363 54228129 - MGP_LPJ_P0060715 Rfxap protein_coding protein_coding MGP_LPJ_T0060716.1 MGP_LPJ_G0027155.1 mouse_genomes_project 3 54224469 54226104 - Rfxap protein_coding processed_transcript MGP_LPJ_T0060717.1 MGP_LPJ_G0027155.1 mouse_genomes_project 3 54226111 54227758 - Rfxap protein_coding processed_transcript MGP_LPJ_T0004263.1 MGP_LPJ_G0003752.1 mouse_genomes_project 3 54824085 54850340 - Gm42609 antisense antisense MGP_LPJ_T0004264.1 MGP_LPJ_G0003752.1 mouse_genomes_project 3 54826887 54848242 - Gm42609 antisense antisense MGP_LPJ_T0014284.1 MGP_LPJ_G0012375.1 mouse_genomes_project 3 139503960 139504385 + processed_pseudogene processed_pseudogene MGP_LPJ_T0059844.1 MGP_LPJ_G0026978.1 mouse_genomes_project 3 1932487 1946335 - MGP_LPJ_P0059844 protein_coding protein_coding MGP_LPJ_T0059846.1 MGP_LPJ_G0026978.1 mouse_genomes_project 3 1932496 1946283 - MGP_LPJ_P0059846 protein_coding protein_coding MGP_LPJ_T0001360.1 MGP_LPJ_G0001280.1 mouse_genomes_project 3 131047537 131050740 - TEC TEC MGP_LPJ_T0007658.1 MGP_LPJ_G0006266.1 mouse_genomes_project 3 104845146 105017989 + A230001M10Rik lincRNA lincRNA MGP_LPJ_T0007659.1 MGP_LPJ_G0006266.1 mouse_genomes_project 3 104845263 104871628 + A230001M10Rik lincRNA lincRNA MGP_LPJ_T0007660.1 MGP_LPJ_G0006266.1 mouse_genomes_project 3 104845579 104870833 + A230001M10Rik lincRNA lincRNA MGP_LPJ_T0062145.1 MGP_LPJ_G0027492.1 mouse_genomes_project 3 96944619 96976928 + MGP_LPJ_P0062145 Pi4kb protein_coding protein_coding MGP_LPJ_T0062146.1 MGP_LPJ_G0027492.1 mouse_genomes_project 3 96944719 96976216 + MGP_LPJ_P0062146 Pi4kb protein_coding protein_coding MGP_LPJ_T0062147.1 MGP_LPJ_G0027492.1 mouse_genomes_project 3 96944764 96976212 + MGP_LPJ_P0062147 Pi4kb protein_coding protein_coding MGP_LPJ_T0062148.1 MGP_LPJ_G0027492.1 mouse_genomes_project 3 96946006 96976866 + MGP_LPJ_P0062148 Pi4kb protein_coding protein_coding MGP_LPJ_T0062149.1 MGP_LPJ_G0027492.1 mouse_genomes_project 3 96946033 96965913 + MGP_LPJ_P0062149 Pi4kb protein_coding protein_coding MGP_LPJ_T0062150.1 MGP_LPJ_G0027492.1 mouse_genomes_project 3 96968897 96976245 + MGP_LPJ_P0062150 Pi4kb protein_coding protein_coding MGP_LPJ_T0062151.1 MGP_LPJ_G0027492.1 mouse_genomes_project 3 96974379 96976313 + Pi4kb protein_coding processed_transcript MGP_LPJ_T0007611.1 MGP_LPJ_G0006232.1 mouse_genomes_project 3 85238598 85261673 - 4930565D16Rik lincRNA lincRNA MGP_LPJ_T0060924.1 MGP_LPJ_G0027204.1 mouse_genomes_project 3 64016895 64044012 - MGP_LPJ_P0060924 Vmn2r2 protein_coding protein_coding MGP_LPJ_T0010570.1 MGP_LPJ_G0008688.1 mouse_genomes_project 3 131586019 131586093 + Mir302b miRNA miRNA MGP_LPJ_T0061940.1 MGP_LPJ_G0027406.1 mouse_genomes_project 3 91906170 91907545 + MGP_LPJ_P0061940 S100a14 protein_coding protein_coding MGP_LPJ_T0061941.1 MGP_LPJ_G0027406.1 mouse_genomes_project 3 91906181 91908152 + MGP_LPJ_P0061941 S100a14 protein_coding protein_coding MGP_LPJ_T0061942.1 MGP_LPJ_G0027406.1 mouse_genomes_project 3 91906184 91908152 + MGP_LPJ_P0061942 S100a14 protein_coding protein_coding MGP_LPJ_T0061943.1 MGP_LPJ_G0027406.1 mouse_genomes_project 3 91906186 91908141 + S100a14 protein_coding retained_intron MGP_LPJ_T0007781.1 MGP_LPJ_G0006366.1 mouse_genomes_project 3 154310099 154351483 + Gm42649 lincRNA lincRNA MGP_LPJ_T0007783.1 MGP_LPJ_G0006366.1 mouse_genomes_project 3 154340656 154342916 + Gm42649 lincRNA lincRNA MGP_LPJ_T0007617.1 MGP_LPJ_G0006238.1 mouse_genomes_project 3 89322113 89326594 + Gm3764 lincRNA lincRNA MGP_LPJ_T0007618.1 MGP_LPJ_G0006238.1 mouse_genomes_project 3 89322126 89340708 + Gm3764 lincRNA lincRNA MGP_LPJ_T0007619.1 MGP_LPJ_G0006238.1 mouse_genomes_project 3 89322612 89341265 + Gm3764 lincRNA lincRNA MGP_LPJ_T0007620.1 MGP_LPJ_G0006238.1 mouse_genomes_project 3 89324770 89339558 + Gm3764 lincRNA lincRNA MGP_LPJ_T0007621.1 MGP_LPJ_G0006238.1 mouse_genomes_project 3 89329783 89337130 + Gm3764 lincRNA lincRNA MGP_LPJ_T0007622.1 MGP_LPJ_G0006238.1 mouse_genomes_project 3 89329793 89341316 + Gm3764 lincRNA lincRNA MGP_LPJ_T0007623.1 MGP_LPJ_G0006238.1 mouse_genomes_project 3 89337933 89339572 + Gm3764 lincRNA lincRNA MGP_LPJ_T0007624.1 MGP_LPJ_G0006238.1 mouse_genomes_project 3 89339549 89345225 + Gm3764 lincRNA lincRNA MGP_LPJ_T0007625.1 MGP_LPJ_G0006238.1 mouse_genomes_project 3 89341202 89343280 + Gm3764 lincRNA lincRNA MGP_LPJ_T0007626.1 MGP_LPJ_G0006238.1 mouse_genomes_project 3 89343835 89345036 + Gm3764 lincRNA lincRNA MGP_LPJ_T0007627.1 MGP_LPJ_G0006238.1 mouse_genomes_project 3 89344050 89345225 + Gm3764 lincRNA lincRNA MGP_LPJ_T0064000.1 MGP_LPJ_G0027880.1 mouse_genomes_project 3 149554392 149585110 - MGP_LPJ_P0064000 Clca3b protein_coding protein_coding MGP_LPJ_T0007733.1 MGP_LPJ_G0006325.1 mouse_genomes_project 3 140801569 140816660 - 1700030L20Rik lincRNA lincRNA MGP_LPJ_T0001159.1 MGP_LPJ_G0001081.1 mouse_genomes_project 3 28316074 28317708 - TEC TEC MGP_LPJ_T0098568.1 MGP_LPJ_G0036842.1 mouse_genomes_project 3 106741333 106743771 - Gm42700 sense_intronic sense_intronic MGP_LPJ_T0060660.1 MGP_LPJ_G0027145.1 mouse_genomes_project 3 52814995 52826320 + Stoml3 protein_coding retained_intron MGP_LPJ_T0060661.1 MGP_LPJ_G0027145.1 mouse_genomes_project 3 52815069 52838572 + MGP_LPJ_P0060661 Stoml3 protein_coding protein_coding MGP_LPJ_T0099455.1 MGP_LPJ_G0037718.1 mouse_genomes_project 3 157132483 157132545 - Gm25056 snRNA snRNA MGP_LPJ_T0007497.1 MGP_LPJ_G0006144.1 mouse_genomes_project 3 25138272 25141268 + 1700125G22Rik lincRNA lincRNA MGP_LPJ_T0061302.1 MGP_LPJ_G0027297.1 mouse_genomes_project 3 88426853 88442166 + MGP_LPJ_P0061302 Fcrl1 protein_coding protein_coding MGP_LPJ_T0061303.1 MGP_LPJ_G0027297.1 mouse_genomes_project 3 88426855 88442559 + MGP_LPJ_P0061303 Fcrl1 protein_coding protein_coding MGP_LPJ_T0061304.1 MGP_LPJ_G0027297.1 mouse_genomes_project 3 88426914 88442560 + MGP_LPJ_P0061304 Fcrl1 protein_coding protein_coding MGP_LPJ_T0061305.1 MGP_LPJ_G0027297.1 mouse_genomes_project 3 88426926 88452780 + MGP_LPJ_P0061305 Fcrl1 protein_coding protein_coding MGP_LPJ_T0061306.1 MGP_LPJ_G0027297.1 mouse_genomes_project 3 88426933 88442180 + MGP_LPJ_P0061306 Fcrl1 protein_coding protein_coding MGP_LPJ_T0061307.1 MGP_LPJ_G0027297.1 mouse_genomes_project 3 88436057 88442524 + Fcrl1 protein_coding retained_intron MGP_LPJ_T0001161.1 MGP_LPJ_G0001083.1 mouse_genomes_project 3 28424415 28426538 - TEC TEC MGP_LPJ_T0001291.1 MGP_LPJ_G0001211.1 mouse_genomes_project 3 90491844 90494584 + TEC TEC MGP_LPJ_T0102096.1 MGP_LPJ_G0040133.1 mouse_genomes_project 3 84645575 84669101 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0063099.1 MGP_LPJ_G0027709.1 mouse_genomes_project 3 111636688 111664333 + MGP_LPJ_P0063099 Clcc1 protein_coding protein_coding MGP_LPJ_T0063100.1 MGP_LPJ_G0027709.1 mouse_genomes_project 3 111636724 111647325 + Clcc1 protein_coding processed_transcript MGP_LPJ_T0063101.1 MGP_LPJ_G0027709.1 mouse_genomes_project 3 111636732 111652412 + Clcc1 protein_coding processed_transcript MGP_LPJ_T0063102.1 MGP_LPJ_G0027709.1 mouse_genomes_project 3 111636733 111664329 + MGP_LPJ_P0063102 Clcc1 protein_coding protein_coding MGP_LPJ_T0063103.1 MGP_LPJ_G0027709.1 mouse_genomes_project 3 111636733 111647874 + MGP_LPJ_P0063103 Clcc1 protein_coding protein_coding MGP_LPJ_T0063104.1 MGP_LPJ_G0027709.1 mouse_genomes_project 3 111636765 111663505 + MGP_LPJ_P0063104 Clcc1 protein_coding protein_coding MGP_LPJ_T0063105.1 MGP_LPJ_G0027709.1 mouse_genomes_project 3 111647517 111653150 + Clcc1 protein_coding processed_transcript MGP_LPJ_T0063106.1 MGP_LPJ_G0027709.1 mouse_genomes_project 3 111652185 111653156 + Clcc1 protein_coding retained_intron MGP_LPJ_T0060677.1 MGP_LPJ_G0027149.1 mouse_genomes_project 3 53743008 53773083 + MGP_LPJ_P0060677 Postn protein_coding protein_coding MGP_LPJ_T0060678.1 MGP_LPJ_G0027149.1 mouse_genomes_project 3 53743008 53773086 + MGP_LPJ_P0060678 Postn protein_coding protein_coding MGP_LPJ_T0060679.1 MGP_LPJ_G0027149.1 mouse_genomes_project 3 53743024 53773083 + MGP_LPJ_P0060679 Postn protein_coding protein_coding MGP_LPJ_T0060680.1 MGP_LPJ_G0027149.1 mouse_genomes_project 3 53743042 53772501 + MGP_LPJ_P0060680 Postn protein_coding protein_coding MGP_LPJ_T0060681.1 MGP_LPJ_G0027149.1 mouse_genomes_project 3 53759608 53772696 + MGP_LPJ_P0060681 Postn protein_coding protein_coding MGP_LPJ_T0060682.1 MGP_LPJ_G0027149.1 mouse_genomes_project 3 53760532 53766761 + Postn protein_coding retained_intron MGP_LPJ_T0060683.1 MGP_LPJ_G0027149.1 mouse_genomes_project 3 53765155 53772536 + Postn protein_coding retained_intron MGP_LPJ_T0060684.1 MGP_LPJ_G0027149.1 mouse_genomes_project 3 53765157 53772631 + Postn protein_coding retained_intron MGP_LPJ_T0060685.1 MGP_LPJ_G0027149.1 mouse_genomes_project 3 53770937 53772442 + Postn protein_coding retained_intron MGP_LPJ_T0010531.1 MGP_LPJ_G0008649.1 mouse_genomes_project 3 37266630 37266736 - Gm24462 miRNA miRNA MGP_LPJ_T0062410.1 MGP_LPJ_G0027541.1 mouse_genomes_project 3 98381888 98383528 - MGP_LPJ_P0062410 Hist2h4 protein_coding protein_coding MGP_LPJ_T0102121.1 MGP_LPJ_G0040158.1 mouse_genomes_project 3 110844250 110850247 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0062476.1 MGP_LPJ_G0027561.1 mouse_genomes_project 3 99012394 99033126 + MGP_LPJ_P0062476 Pdzk1 protein_coding protein_coding MGP_LPJ_T0062477.1 MGP_LPJ_G0027561.1 mouse_genomes_project 3 99012573 99033211 + MGP_LPJ_P0062477 Pdzk1 protein_coding protein_coding MGP_LPJ_T0062478.1 MGP_LPJ_G0027561.1 mouse_genomes_project 3 99013186 99047672 + MGP_LPJ_P0062478 Pdzk1 protein_coding protein_coding MGP_LPJ_T0062479.1 MGP_LPJ_G0027561.1 mouse_genomes_project 3 99015264 99047492 + MGP_LPJ_P0062479 Pdzk1 protein_coding protein_coding MGP_LPJ_T0062480.1 MGP_LPJ_G0027561.1 mouse_genomes_project 3 99015281 99047218 + MGP_LPJ_P0062480 Pdzk1 protein_coding protein_coding MGP_LPJ_T0062481.1 MGP_LPJ_G0027561.1 mouse_genomes_project 3 99015281 99047342 + MGP_LPJ_P0062481 Pdzk1 protein_coding nonsense_mediated_decay MGP_LPJ_T0062482.1 MGP_LPJ_G0027561.1 mouse_genomes_project 3 99016336 99031850 + MGP_LPJ_P0062482 Pdzk1 protein_coding protein_coding MGP_LPJ_T0014333.1 MGP_LPJ_G0012424.1 mouse_genomes_project 3 157368233 157368904 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007672.1 MGP_LPJ_G0006276.1 mouse_genomes_project 3 109925397 109940241 + AI504432 lincRNA lincRNA MGP_LPJ_T0004433.1 MGP_LPJ_G0003867.1 mouse_genomes_project 3 162350467 162367988 - Gm15577 antisense antisense MGP_LPJ_T0007474.1 MGP_LPJ_G0006128.1 mouse_genomes_project 3 11075957 11078648 - Gm2464 lincRNA lincRNA MGP_LPJ_T0014250.1 MGP_LPJ_G0012341.1 mouse_genomes_project 3 127358640 127359373 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004420.1 MGP_LPJ_G0003857.1 mouse_genomes_project 3 150225057 150227078 - 9530034A14Rik antisense antisense MGP_LPJ_T0004431.1 MGP_LPJ_G0003865.1 mouse_genomes_project 3 159209494 159213252 + Gm43400 antisense antisense MGP_LPJ_T0007755.1 MGP_LPJ_G0006345.1 mouse_genomes_project 3 148259279 148260748 - Gm43616 lincRNA lincRNA MGP_LPJ_T0061994.1 MGP_LPJ_G0027436.1 mouse_genomes_project 3 94192841 94194836 - MGP_LPJ_P0061994 2310046K23Rik protein_coding protein_coding MGP_LPJ_T0014001.1 MGP_LPJ_G0012092.1 mouse_genomes_project 3 50873472 50873905 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007736.1 MGP_LPJ_G0006328.1 mouse_genomes_project 3 141708206 141718990 + Gm567 lincRNA lincRNA MGP_LPJ_T0061105.1 MGP_LPJ_G0027248.1 mouse_genomes_project 3 80121007 80242085 - MGP_LPJ_P0061105 Fnip2 protein_coding protein_coding MGP_LPJ_T0061106.1 MGP_LPJ_G0027248.1 mouse_genomes_project 3 80122269 80131590 - Fnip2 protein_coding retained_intron MGP_LPJ_T0061107.1 MGP_LPJ_G0027248.1 mouse_genomes_project 3 80124677 80241971 - MGP_LPJ_P0061107 Fnip2 protein_coding protein_coding MGP_LPJ_T0061108.1 MGP_LPJ_G0027248.1 mouse_genomes_project 3 80124976 80168156 - Fnip2 protein_coding retained_intron MGP_LPJ_T0061109.1 MGP_LPJ_G0027248.1 mouse_genomes_project 3 80171878 80185927 - Fnip2 protein_coding processed_transcript MGP_LPJ_T0061110.1 MGP_LPJ_G0027248.1 mouse_genomes_project 3 80175621 80241968 - Fnip2 protein_coding retained_intron MGP_LPJ_T0007577.1 MGP_LPJ_G0006203.1 mouse_genomes_project 3 60585614 60591973 + Gm38326 lincRNA lincRNA MGP_LPJ_T0062005.1 MGP_LPJ_G0027445.1 mouse_genomes_project 3 94362522 94364234 - MGP_LPJ_P0062005 Lce1d protein_coding protein_coding MGP_LPJ_T0062709.1 MGP_LPJ_G0027617.1 mouse_genomes_project 3 105677412 105745001 + MGP_LPJ_P0062709 Dennd2c protein_coding protein_coding MGP_LPJ_T0062710.1 MGP_LPJ_G0027617.1 mouse_genomes_project 3 105677468 105731120 + Dennd2c protein_coding retained_intron MGP_LPJ_T0062711.1 MGP_LPJ_G0027617.1 mouse_genomes_project 3 105702804 105744970 + MGP_LPJ_P0062711 Dennd2c protein_coding protein_coding MGP_LPJ_T0062712.1 MGP_LPJ_G0027617.1 mouse_genomes_project 3 105714407 105743896 + Dennd2c protein_coding processed_transcript MGP_LPJ_T0062713.1 MGP_LPJ_G0027617.1 mouse_genomes_project 3 105714891 105744963 + Dennd2c protein_coding retained_intron MGP_LPJ_T0062714.1 MGP_LPJ_G0027617.1 mouse_genomes_project 3 105723011 105732352 + Dennd2c protein_coding retained_intron MGP_LPJ_T0060881.1 MGP_LPJ_G0027193.1 mouse_genomes_project 3 61169814 61176597 + MGP_LPJ_P0060881 Rap2b protein_coding protein_coding MGP_LPJ_T0004296.1 MGP_LPJ_G0003776.1 mouse_genomes_project 3 90460269 90461808 - Gm16069 antisense antisense MGP_LPJ_T0007756.1 MGP_LPJ_G0006346.1 mouse_genomes_project 3 148260360 148272881 + Gm33651 lincRNA lincRNA MGP_LPJ_T0001208.1 MGP_LPJ_G0001130.1 mouse_genomes_project 3 48275784 48277696 + TEC TEC MGP_LPJ_T0059983.1 MGP_LPJ_G0027023.1 mouse_genomes_project 3 15744362 15744912 + MGP_LPJ_P0059983 Cypt12 protein_coding protein_coding MGP_LPJ_T0001370.1 MGP_LPJ_G0001290.1 mouse_genomes_project 3 132126513 132128523 + TEC TEC MGP_LPJ_T0001371.1 MGP_LPJ_G0001290.1 mouse_genomes_project 3 132126514 132128523 + TEC TEC MGP_LPJ_T0007531.1 MGP_LPJ_G0006172.1 mouse_genomes_project 3 37131223 37147192 - Gm43536 lincRNA lincRNA MGP_LPJ_T0007532.1 MGP_LPJ_G0006172.1 mouse_genomes_project 3 37132878 37147432 - Gm43536 lincRNA lincRNA MGP_LPJ_T0010576.1 MGP_LPJ_G0008694.1 mouse_genomes_project 3 138442773 138442864 - Gm44361 miRNA miRNA MGP_LPJ_T0063811.1 MGP_LPJ_G0027839.1 mouse_genomes_project 3 141760711 141853885 + MGP_LPJ_P0063811 Emcn protein_coding protein_coding MGP_LPJ_T0063812.1 MGP_LPJ_G0027839.1 mouse_genomes_project 3 141760734 141842997 + Emcn protein_coding retained_intron MGP_LPJ_T0063813.1 MGP_LPJ_G0027839.1 mouse_genomes_project 3 141760787 141852769 + MGP_LPJ_P0063813 Emcn protein_coding protein_coding MGP_LPJ_T0063814.1 MGP_LPJ_G0027839.1 mouse_genomes_project 3 141760818 141849039 + MGP_LPJ_P0063814 Emcn protein_coding protein_coding MGP_LPJ_T0098710.1 MGP_LPJ_G0036974.1 mouse_genomes_project 3 93763291 93805741 - 4930511M18Rik sense_overlapping sense_overlapping MGP_LPJ_T0004294.1 MGP_LPJ_G0003774.1 mouse_genomes_project 3 89874927 89878170 - antisense antisense MGP_LPJ_T0063294.1 MGP_LPJ_G0027750.1 mouse_genomes_project 3 121108987 121232251 + MGP_LPJ_P0063294 Plppr5 protein_coding protein_coding MGP_LPJ_T0063295.1 MGP_LPJ_G0027750.1 mouse_genomes_project 3 121109378 121232251 + MGP_LPJ_P0063295 Plppr5 protein_coding protein_coding MGP_LPJ_T0098563.1 MGP_LPJ_G0036837.1 mouse_genomes_project 3 106409844 106410910 - Gm43387 sense_intronic sense_intronic MGP_LPJ_T0007686.1 MGP_LPJ_G0006288.1 mouse_genomes_project 3 119940096 119944517 + Gm26530 lincRNA lincRNA MGP_LPJ_T0062105.1 MGP_LPJ_G0027487.1 mouse_genomes_project 3 96619050 96638922 + MGP_LPJ_P0062105 Selenbp2 protein_coding protein_coding MGP_LPJ_T0062106.1 MGP_LPJ_G0027487.1 mouse_genomes_project 3 96622405 96623775 + Selenbp2 protein_coding processed_transcript MGP_LPJ_T0011566.1 MGP_LPJ_G0009684.1 mouse_genomes_project 3 130084347 130084615 - Gm26275 misc_RNA misc_RNA MGP_LPJ_T0007505.1 MGP_LPJ_G0006151.1 mouse_genomes_project 3 32439300 32441504 - Gm43077 lincRNA lincRNA MGP_LPJ_T0060378.1 MGP_LPJ_G0027098.1 mouse_genomes_project 3 35138932 35152064 + MGP_LPJ_P0060378 Exosc9 protein_coding protein_coding MGP_LPJ_T0060379.1 MGP_LPJ_G0027098.1 mouse_genomes_project 3 35138932 35149599 + MGP_LPJ_P0060379 Exosc9 protein_coding nonsense_mediated_decay MGP_LPJ_T0060380.1 MGP_LPJ_G0027098.1 mouse_genomes_project 3 35138940 35143074 + Exosc9 protein_coding retained_intron MGP_LPJ_T0060381.1 MGP_LPJ_G0027098.1 mouse_genomes_project 3 35138953 35143293 + Exosc9 protein_coding retained_intron MGP_LPJ_T0060382.1 MGP_LPJ_G0027098.1 mouse_genomes_project 3 35138964 35143247 + MGP_LPJ_P0060382 Exosc9 protein_coding protein_coding MGP_LPJ_T0060383.1 MGP_LPJ_G0027098.1 mouse_genomes_project 3 35138977 35147844 + Exosc9 protein_coding retained_intron MGP_LPJ_T0060384.1 MGP_LPJ_G0027098.1 mouse_genomes_project 3 35141859 35149574 + MGP_LPJ_P0060384 Exosc9 protein_coding protein_coding MGP_LPJ_T0060385.1 MGP_LPJ_G0027098.1 mouse_genomes_project 3 35148631 35151982 + MGP_LPJ_P0060385 Exosc9 protein_coding protein_coding MGP_LPJ_T0004376.1 MGP_LPJ_G0003825.1 mouse_genomes_project 3 120083355 120083894 + Gm42457 antisense antisense MGP_LPJ_T0060081.1 MGP_LPJ_G0027045.1 mouse_genomes_project 3 25079513 25138125 - MGP_LPJ_P0060081 Ect2 protein_coding protein_coding MGP_LPJ_T0060082.1 MGP_LPJ_G0027045.1 mouse_genomes_project 3 25079513 25138108 - MGP_LPJ_P0060082 Ect2 protein_coding protein_coding MGP_LPJ_T0060083.1 MGP_LPJ_G0027045.1 mouse_genomes_project 3 25079514 25138101 - MGP_LPJ_P0060083 Ect2 protein_coding protein_coding MGP_LPJ_T0060084.1 MGP_LPJ_G0027045.1 mouse_genomes_project 3 25079517 25138097 - MGP_LPJ_P0060084 Ect2 protein_coding nonsense_mediated_decay MGP_LPJ_T0060085.1 MGP_LPJ_G0027045.1 mouse_genomes_project 3 25080597 25100506 - MGP_LPJ_P0060085 Ect2 protein_coding nonsense_mediated_decay MGP_LPJ_T0060086.1 MGP_LPJ_G0027045.1 mouse_genomes_project 3 25100550 25105361 - Ect2 protein_coding retained_intron MGP_LPJ_T0060087.1 MGP_LPJ_G0027045.1 mouse_genomes_project 3 25104546 25138059 - Ect2 protein_coding retained_intron MGP_LPJ_T0060088.1 MGP_LPJ_G0027045.1 mouse_genomes_project 3 25114725 25121077 - Ect2 protein_coding retained_intron MGP_LPJ_T0060089.1 MGP_LPJ_G0027045.1 mouse_genomes_project 3 25129197 25131448 - Ect2 protein_coding retained_intron MGP_LPJ_T0060090.1 MGP_LPJ_G0027045.1 mouse_genomes_project 3 25129267 25138101 - MGP_LPJ_P0060090 Ect2 protein_coding protein_coding MGP_LPJ_T0060091.1 MGP_LPJ_G0027045.1 mouse_genomes_project 3 25130215 25138075 - MGP_LPJ_P0060091 Ect2 protein_coding protein_coding MGP_LPJ_T0060092.1 MGP_LPJ_G0027045.1 mouse_genomes_project 3 25130231 25138057 - MGP_LPJ_P0060092 Ect2 protein_coding protein_coding MGP_LPJ_T0060093.1 MGP_LPJ_G0027045.1 mouse_genomes_project 3 25130275 25138029 - MGP_LPJ_P0060093 Ect2 protein_coding protein_coding MGP_LPJ_T0001406.1 MGP_LPJ_G0001325.1 mouse_genomes_project 3 157040078 157043529 + TEC TEC MGP_LPJ_T0062384.1 MGP_LPJ_G0027533.1 mouse_genomes_project 3 98218720 98276714 + MGP_LPJ_P0062384 Otud7b protein_coding protein_coding MGP_LPJ_T0062385.1 MGP_LPJ_G0027533.1 mouse_genomes_project 3 98218720 98276714 + MGP_LPJ_P0062385 Otud7b protein_coding protein_coding MGP_LPJ_T0062386.1 MGP_LPJ_G0027533.1 mouse_genomes_project 3 98218720 98256891 + MGP_LPJ_P0062386 Otud7b protein_coding protein_coding MGP_LPJ_T0062387.1 MGP_LPJ_G0027533.1 mouse_genomes_project 3 98218720 98259806 + MGP_LPJ_P0062387 Otud7b protein_coding protein_coding MGP_LPJ_T0062388.1 MGP_LPJ_G0027533.1 mouse_genomes_project 3 98218739 98246459 + Otud7b protein_coding processed_transcript MGP_LPJ_T0062389.1 MGP_LPJ_G0027533.1 mouse_genomes_project 3 98218741 98256926 + Otud7b protein_coding processed_transcript MGP_LPJ_T0062390.1 MGP_LPJ_G0027533.1 mouse_genomes_project 3 98221271 98276714 + MGP_LPJ_P0062390 Otud7b protein_coding protein_coding MGP_LPJ_T0062391.1 MGP_LPJ_G0027533.1 mouse_genomes_project 3 98266172 98268032 + Otud7b protein_coding processed_transcript MGP_LPJ_T0013954.1 MGP_LPJ_G0012045.1 mouse_genomes_project 3 35291914 35292166 - processed_pseudogene processed_pseudogene MGP_LPJ_T0063996.1 MGP_LPJ_G0027878.1 mouse_genomes_project 3 149492026 149551241 - MGP_LPJ_P0063996 Clca3a2 protein_coding protein_coding MGP_LPJ_T0063997.1 MGP_LPJ_G0027878.1 mouse_genomes_project 3 149497145 149500159 - MGP_LPJ_P0063997 Clca3a2 protein_coding protein_coding MGP_LPJ_T0063998.1 MGP_LPJ_G0027878.1 mouse_genomes_project 3 149497372 149507799 - MGP_LPJ_P0063998 Clca3a2 protein_coding protein_coding MGP_LPJ_T0004258.1 MGP_LPJ_G0003748.1 mouse_genomes_project 3 52356361 52359532 - Gm42901 antisense antisense MGP_LPJ_T0014030.1 MGP_LPJ_G0012121.1 mouse_genomes_project 3 60081250 60081986 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013848.1 MGP_LPJ_G0011939.1 mouse_genomes_project 3 918909 919683 + processed_pseudogene processed_pseudogene MGP_LPJ_T0060958.1 MGP_LPJ_G0027211.1 mouse_genomes_project 3 66114729 66357725 - MGP_LPJ_P0060958 Veph1 protein_coding protein_coding MGP_LPJ_T0060959.1 MGP_LPJ_G0027211.1 mouse_genomes_project 3 66118842 66200563 - Veph1 protein_coding processed_transcript MGP_LPJ_T0060962.1 MGP_LPJ_G0027211.1 mouse_genomes_project 3 66307671 66357636 - Veph1 protein_coding retained_intron MGP_LPJ_T0001319.1 MGP_LPJ_G0001239.1 mouse_genomes_project 3 113714925 113717421 + TEC TEC MGP_LPJ_T0099427.1 MGP_LPJ_G0037690.1 mouse_genomes_project 3 98519813 98519978 + Rnu1b1 snRNA snRNA MGP_LPJ_T0001353.1 MGP_LPJ_G0001273.1 mouse_genomes_project 3 130645837 130646489 + TEC TEC MGP_LPJ_T0001266.1 MGP_LPJ_G0001186.1 mouse_genomes_project 3 65719208 65721708 + TEC TEC MGP_LPJ_T0061573.1 MGP_LPJ_G0027347.1 mouse_genomes_project 3 90168593 90210601 - MGP_LPJ_P0061573 Dap3 protein_coding protein_coding MGP_LPJ_T0061574.1 MGP_LPJ_G0027347.1 mouse_genomes_project 3 90171433 90173341 - Dap3 protein_coding retained_intron MGP_LPJ_T0061575.1 MGP_LPJ_G0027347.1 mouse_genomes_project 3 90171433 90210138 - MGP_LPJ_P0061575 Dap3 protein_coding protein_coding MGP_LPJ_T0061576.1 MGP_LPJ_G0027347.1 mouse_genomes_project 3 90171560 90190009 - MGP_LPJ_P0061576 Dap3 protein_coding protein_coding MGP_LPJ_T0061577.1 MGP_LPJ_G0027347.1 mouse_genomes_project 3 90171596 90190042 - MGP_LPJ_P0061577 Dap3 protein_coding protein_coding MGP_LPJ_T0061578.1 MGP_LPJ_G0027347.1 mouse_genomes_project 3 90171626 90211360 - MGP_LPJ_P0061578 Dap3 protein_coding protein_coding MGP_LPJ_T0061579.1 MGP_LPJ_G0027347.1 mouse_genomes_project 3 90176272 90210485 - MGP_LPJ_P0061579 Dap3 protein_coding protein_coding MGP_LPJ_T0061580.1 MGP_LPJ_G0027347.1 mouse_genomes_project 3 90176306 90211287 - MGP_LPJ_P0061580 Dap3 protein_coding protein_coding MGP_LPJ_T0061581.1 MGP_LPJ_G0027347.1 mouse_genomes_project 3 90177241 90210458 - MGP_LPJ_P0061581 Dap3 protein_coding protein_coding MGP_LPJ_T0061582.1 MGP_LPJ_G0027347.1 mouse_genomes_project 3 90177289 90210093 - MGP_LPJ_P0061582 Dap3 protein_coding protein_coding MGP_LPJ_T0061586.1 MGP_LPJ_G0027347.1 mouse_genomes_project 3 90193789 90198708 - MGP_LPJ_P0061586 Dap3 protein_coding protein_coding MGP_LPJ_T0061587.1 MGP_LPJ_G0027347.1 mouse_genomes_project 3 90209239 90211216 - Dap3 protein_coding processed_transcript MGP_LPJ_T0061589.1 MGP_LPJ_G0027347.1 mouse_genomes_project 3 90210822 90211288 - Dap3 protein_coding processed_transcript MGP_LPJ_T0102113.1 MGP_LPJ_G0040150.1 mouse_genomes_project 3 100926888 100944410 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0099419.1 MGP_LPJ_G0037682.1 mouse_genomes_project 3 91559272 91559377 + Gm24185 snRNA snRNA MGP_LPJ_T0014245.1 MGP_LPJ_G0012336.1 mouse_genomes_project 3 126424227 126424706 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007608.1 MGP_LPJ_G0006229.1 mouse_genomes_project 3 83935015 83938984 - Gm10710 lincRNA lincRNA MGP_LPJ_T0061989.1 MGP_LPJ_G0027431.1 mouse_genomes_project 3 94095975 94097319 + MGP_LPJ_P0061989 Sprr2k protein_coding protein_coding MGP_LPJ_T0062225.1 MGP_LPJ_G0027505.1 mouse_genomes_project 3 97239967 97249471 + MGP_LPJ_P0062225 Cdc42se1 protein_coding protein_coding MGP_LPJ_T0062226.1 MGP_LPJ_G0027505.1 mouse_genomes_project 3 97240045 97245443 + Cdc42se1 protein_coding retained_intron MGP_LPJ_T0062227.1 MGP_LPJ_G0027505.1 mouse_genomes_project 3 97240187 97247644 + MGP_LPJ_P0062227 Cdc42se1 protein_coding protein_coding MGP_LPJ_T0062228.1 MGP_LPJ_G0027505.1 mouse_genomes_project 3 97245348 97247602 + MGP_LPJ_P0062228 Cdc42se1 protein_coding protein_coding MGP_LPJ_T0062229.1 MGP_LPJ_G0027505.1 mouse_genomes_project 3 97245354 97247724 + MGP_LPJ_P0062229 Cdc42se1 protein_coding protein_coding MGP_LPJ_T0014053.1 MGP_LPJ_G0012144.1 mouse_genomes_project 3 66631422 66632171 - processed_pseudogene processed_pseudogene MGP_LPJ_T0062627.1 MGP_LPJ_G0027603.1 mouse_genomes_project 3 104365507 104393174 - MGP_LPJ_P0062627 Mab21l3 protein_coding protein_coding MGP_LPJ_T0062628.1 MGP_LPJ_G0027603.1 mouse_genomes_project 3 104366114 104407865 - MGP_LPJ_P0062628 Mab21l3 protein_coding protein_coding MGP_LPJ_T0062430.1 MGP_LPJ_G0027551.1 mouse_genomes_project 3 98800189 98804053 + MGP_LPJ_P0062430 Rbm8a protein_coding protein_coding MGP_LPJ_T0062431.1 MGP_LPJ_G0027551.1 mouse_genomes_project 3 98800196 98804053 + MGP_LPJ_P0062431 Rbm8a protein_coding protein_coding MGP_LPJ_T0062432.1 MGP_LPJ_G0027551.1 mouse_genomes_project 3 98800218 98803166 + MGP_LPJ_P0062432 Rbm8a protein_coding protein_coding MGP_LPJ_T0062433.1 MGP_LPJ_G0027551.1 mouse_genomes_project 3 98800229 98800811 + Rbm8a protein_coding retained_intron MGP_LPJ_T0062434.1 MGP_LPJ_G0027551.1 mouse_genomes_project 3 98801478 98802158 + Rbm8a protein_coding retained_intron MGP_LPJ_T0004374.1 MGP_LPJ_G0003823.1 mouse_genomes_project 3 119795223 119798009 + Gm29151 antisense antisense MGP_LPJ_T0001188.1 MGP_LPJ_G0001110.1 mouse_genomes_project 3 36295468 36298951 + TEC TEC MGP_LPJ_T0061037.1 MGP_LPJ_G0027229.1 mouse_genomes_project 3 69226186 69285828 - MGP_LPJ_P0061037 Kpna4 protein_coding protein_coding MGP_LPJ_T0061038.1 MGP_LPJ_G0027229.1 mouse_genomes_project 3 69231258 69285807 - MGP_LPJ_P0061038 Kpna4 protein_coding protein_coding MGP_LPJ_T0061039.1 MGP_LPJ_G0027229.1 mouse_genomes_project 3 69253426 69285345 - MGP_LPJ_P0061039 Kpna4 protein_coding protein_coding MGP_LPJ_T0062239.1 MGP_LPJ_G0027509.1 mouse_genomes_project 3 97300950 97306091 + Fam63a protein_coding processed_transcript MGP_LPJ_T0062240.1 MGP_LPJ_G0027509.1 mouse_genomes_project 3 97301022 97307966 + Fam63a protein_coding processed_transcript MGP_LPJ_T0062241.1 MGP_LPJ_G0027509.1 mouse_genomes_project 3 97301092 97303610 + Fam63a protein_coding processed_transcript MGP_LPJ_T0062242.1 MGP_LPJ_G0027509.1 mouse_genomes_project 3 97301450 97304985 + Fam63a protein_coding processed_transcript MGP_LPJ_T0062243.1 MGP_LPJ_G0027509.1 mouse_genomes_project 3 97303037 97316424 + MGP_LPJ_P0062243 Fam63a protein_coding protein_coding MGP_LPJ_T0062244.1 MGP_LPJ_G0027509.1 mouse_genomes_project 3 97303037 97316424 + MGP_LPJ_P0062244 Fam63a protein_coding protein_coding MGP_LPJ_T0062245.1 MGP_LPJ_G0027509.1 mouse_genomes_project 3 97303308 97312010 + Fam63a protein_coding retained_intron MGP_LPJ_T0062246.1 MGP_LPJ_G0027509.1 mouse_genomes_project 3 97303695 97307966 + Fam63a protein_coding processed_transcript MGP_LPJ_T0062247.1 MGP_LPJ_G0027509.1 mouse_genomes_project 3 97305966 97308144 + MGP_LPJ_P0062247 Fam63a protein_coding protein_coding MGP_LPJ_T0062248.1 MGP_LPJ_G0027509.1 mouse_genomes_project 3 97306325 97308090 + Fam63a protein_coding processed_transcript MGP_LPJ_T0062249.1 MGP_LPJ_G0027509.1 mouse_genomes_project 3 97308077 97316421 + MGP_LPJ_P0062249 Fam63a protein_coding protein_coding MGP_LPJ_T0062250.1 MGP_LPJ_G0027509.1 mouse_genomes_project 3 97312186 97316419 + Fam63a protein_coding processed_transcript MGP_LPJ_T0099410.1 MGP_LPJ_G0037673.1 mouse_genomes_project 3 87159208 87159319 + Gm23025 snRNA snRNA MGP_LPJ_T0017898.1 MGP_LPJ_G0015418.1 mouse_genomes_project 3 49740273 49830674 - Gm6209 processed_transcript lincRNA MGP_LPJ_T0017899.1 MGP_LPJ_G0015418.1 mouse_genomes_project 3 49802475 49807100 - Gm6209 processed_transcript retained_intron MGP_LPJ_T0060985.1 MGP_LPJ_G0027217.1 mouse_genomes_project 3 67537154 67543083 - MGP_LPJ_P0060985 Lxn protein_coding protein_coding MGP_LPJ_T0060986.1 MGP_LPJ_G0027217.1 mouse_genomes_project 3 67537157 67540791 - Lxn protein_coding retained_intron MGP_LPJ_T0060987.1 MGP_LPJ_G0027217.1 mouse_genomes_project 3 67540217 67542939 - Lxn protein_coding retained_intron MGP_LPJ_T0014137.1 MGP_LPJ_G0012228.1 mouse_genomes_project 3 95003244 95004066 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007678.1 MGP_LPJ_G0006281.1 mouse_genomes_project 3 111185549 111199025 + Gm42754 lincRNA lincRNA MGP_LPJ_T0014168.1 MGP_LPJ_G0012259.1 mouse_genomes_project 3 102542005 102542173 - processed_pseudogene processed_pseudogene MGP_LPJ_T0062997.1 MGP_LPJ_G0027685.1 mouse_genomes_project 3 110881118 110887602 - MGP_LPJ_P0062997 Gstm6 protein_coding protein_coding MGP_LPJ_T0062998.1 MGP_LPJ_G0027685.1 mouse_genomes_project 3 110881119 110887587 - MGP_LPJ_P0062998 Gstm6 protein_coding protein_coding MGP_LPJ_T0062999.1 MGP_LPJ_G0027685.1 mouse_genomes_project 3 110881233 110887215 - MGP_LPJ_P0062999 Gstm6 protein_coding protein_coding MGP_LPJ_T0063000.1 MGP_LPJ_G0027685.1 mouse_genomes_project 3 110881377 110887236 - MGP_LPJ_P0063000 Gstm6 protein_coding nonsense_mediated_decay MGP_LPJ_T0063001.1 MGP_LPJ_G0027685.1 mouse_genomes_project 3 110883265 110887266 - MGP_LPJ_P0063001 Gstm6 protein_coding protein_coding MGP_LPJ_T0001387.1 MGP_LPJ_G0001306.1 mouse_genomes_project 3 137312536 137314245 - TEC TEC MGP_LPJ_T0064251.1 MGP_LPJ_G0027923.1 mouse_genomes_project 3 158451964 159012425 - MGP_LPJ_P0064251 St6galnac3 protein_coding protein_coding MGP_LPJ_T0064252.1 MGP_LPJ_G0027923.1 mouse_genomes_project 3 158459063 158481895 - MGP_LPJ_P0064252 St6galnac3 protein_coding protein_coding MGP_LPJ_T0064253.1 MGP_LPJ_G0027923.1 mouse_genomes_project 3 158460314 159012364 - MGP_LPJ_P0064253 St6galnac3 protein_coding protein_coding MGP_LPJ_T0064254.1 MGP_LPJ_G0027923.1 mouse_genomes_project 3 158776069 158776935 - St6galnac3 protein_coding retained_intron MGP_LPJ_T0064255.1 MGP_LPJ_G0027923.1 mouse_genomes_project 3 158776324 159008253 - St6galnac3 protein_coding retained_intron MGP_LPJ_T0014223.1 MGP_LPJ_G0012314.1 mouse_genomes_project 3 118214708 118215360 - processed_pseudogene processed_pseudogene MGP_LPJ_T0061680.1 MGP_LPJ_G0027360.1 mouse_genomes_project 3 90511197 90515510 + MGP_LPJ_P0061680 Muc1 protein_coding protein_coding MGP_LPJ_T0061681.1 MGP_LPJ_G0027360.1 mouse_genomes_project 3 90513379 90514223 + Muc1 protein_coding processed_transcript MGP_LPJ_T0061682.1 MGP_LPJ_G0027360.1 mouse_genomes_project 3 90513611 90515326 + Muc1 protein_coding processed_transcript MGP_LPJ_T0010535.1 MGP_LPJ_G0008653.1 mouse_genomes_project 3 57156835 57156949 + Mir6377 miRNA miRNA MGP_LPJ_T0001331.1 MGP_LPJ_G0001251.1 mouse_genomes_project 3 124854091 124856713 + TEC TEC MGP_LPJ_T0001287.1 MGP_LPJ_G0001207.1 mouse_genomes_project 3 86123767 86125016 - TEC TEC MGP_LPJ_T0001351.1 MGP_LPJ_G0001271.1 mouse_genomes_project 3 130613804 130627371 + TEC TEC MGP_LPJ_T0063446.1 MGP_LPJ_G0027778.1 mouse_genomes_project 3 127375507 127535765 - MGP_LPJ_P0063446 Ndst3 protein_coding protein_coding MGP_LPJ_T0063447.1 MGP_LPJ_G0027778.1 mouse_genomes_project 3 127375513 127552072 - MGP_LPJ_P0063447 Ndst3 protein_coding nonsense_mediated_decay MGP_LPJ_T0063448.1 MGP_LPJ_G0027778.1 mouse_genomes_project 3 127375515 127552072 - MGP_LPJ_P0063448 Ndst3 protein_coding protein_coding MGP_LPJ_T0063449.1 MGP_LPJ_G0027778.1 mouse_genomes_project 3 127375516 127535849 - MGP_LPJ_P0063449 Ndst3 protein_coding protein_coding MGP_LPJ_T0063450.1 MGP_LPJ_G0027778.1 mouse_genomes_project 3 127377906 127476775 - MGP_LPJ_P0063450 Ndst3 protein_coding protein_coding MGP_LPJ_T0063451.1 MGP_LPJ_G0027778.1 mouse_genomes_project 3 127378035 127551499 - MGP_LPJ_P0063451 Ndst3 protein_coding protein_coding MGP_LPJ_T0063452.1 MGP_LPJ_G0027778.1 mouse_genomes_project 3 127402371 127536034 - Ndst3 protein_coding retained_intron MGP_LPJ_T0063453.1 MGP_LPJ_G0027778.1 mouse_genomes_project 3 127406441 127409911 - Ndst3 protein_coding retained_intron MGP_LPJ_T0063454.1 MGP_LPJ_G0027778.1 mouse_genomes_project 3 127406612 127426715 - Ndst3 protein_coding processed_transcript MGP_LPJ_T0063173.1 MGP_LPJ_G0027723.1 mouse_genomes_project 3 116547641 116575237 - MGP_LPJ_P0063173 protein_coding protein_coding MGP_LPJ_T0001149.1 MGP_LPJ_G0001071.1 mouse_genomes_project 3 16441606 16445586 + TEC TEC MGP_LPJ_T0064061.1 MGP_LPJ_G0027895.1 mouse_genomes_project 3 151009101 151063503 + MGP_LPJ_P0064061 Mcoln2 protein_coding protein_coding MGP_LPJ_T0064062.1 MGP_LPJ_G0027895.1 mouse_genomes_project 3 151009247 151035523 + Mcoln2 protein_coding retained_intron MGP_LPJ_T0064063.1 MGP_LPJ_G0027895.1 mouse_genomes_project 3 151009442 151063502 + MGP_LPJ_P0064063 Mcoln2 protein_coding protein_coding MGP_LPJ_T0064064.1 MGP_LPJ_G0027895.1 mouse_genomes_project 3 151053443 151060476 + MGP_LPJ_P0064064 Mcoln2 protein_coding protein_coding MGP_LPJ_T0064065.1 MGP_LPJ_G0027895.1 mouse_genomes_project 3 151060072 151063130 + Mcoln2 protein_coding retained_intron MGP_LPJ_T0001201.1 MGP_LPJ_G0001123.1 mouse_genomes_project 3 43524755 43528005 + TEC TEC MGP_LPJ_T0007495.1 MGP_LPJ_G0006142.1 mouse_genomes_project 3 20943985 20946960 + Gm37021 lincRNA lincRNA MGP_LPJ_T0007564.1 MGP_LPJ_G0006195.1 mouse_genomes_project 3 53107267 53123706 + C820005J03Rik lincRNA lincRNA MGP_LPJ_T0061996.1 MGP_LPJ_G0027438.1 mouse_genomes_project 3 94244569 94246907 - MGP_LPJ_P0061996 Smcp protein_coding protein_coding MGP_LPJ_T0061997.1 MGP_LPJ_G0027438.1 mouse_genomes_project 3 94244569 94249716 - MGP_LPJ_P0061997 Smcp protein_coding protein_coding MGP_LPJ_T0013966.1 MGP_LPJ_G0012057.1 mouse_genomes_project 3 38583611 38583891 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014097.1 MGP_LPJ_G0012188.1 mouse_genomes_project 3 79526667 79527219 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001309.1 MGP_LPJ_G0001229.1 mouse_genomes_project 3 107352280 107356092 - TEC TEC MGP_LPJ_T0004253.1 MGP_LPJ_G0003743.1 mouse_genomes_project 3 44356901 44381214 - 1700027H10Rik antisense antisense MGP_LPJ_T0061070.1 MGP_LPJ_G0027240.1 mouse_genomes_project 3 75737411 75780633 - MGP_LPJ_P0061070 Serpini2 protein_coding protein_coding MGP_LPJ_T0098419.1 MGP_LPJ_G0036700.1 mouse_genomes_project 3 111531357 111531771 - Scarna2 scaRNA scaRNA MGP_LPJ_T0004428.1 MGP_LPJ_G0003863.1 mouse_genomes_project 3 158191699 158192329 + Gm16231 antisense antisense MGP_LPJ_T0061117.1 MGP_LPJ_G0027250.1 mouse_genomes_project 3 80280302 80306017 - MGP_LPJ_P0061117 Etfdh protein_coding protein_coding MGP_LPJ_T0061118.1 MGP_LPJ_G0027250.1 mouse_genomes_project 3 80280317 80305851 - MGP_LPJ_P0061118 Etfdh protein_coding protein_coding MGP_LPJ_T0061119.1 MGP_LPJ_G0027250.1 mouse_genomes_project 3 80293338 80305837 - Etfdh protein_coding retained_intron MGP_LPJ_T0061120.1 MGP_LPJ_G0027250.1 mouse_genomes_project 3 80294908 80306017 - Etfdh protein_coding retained_intron MGP_LPJ_T0061121.1 MGP_LPJ_G0027250.1 mouse_genomes_project 3 80297087 80305872 - Etfdh protein_coding retained_intron MGP_LPJ_T0061122.1 MGP_LPJ_G0027250.1 mouse_genomes_project 3 80305402 80306654 - Etfdh protein_coding retained_intron MGP_LPJ_T0061123.1 MGP_LPJ_G0027250.1 mouse_genomes_project 3 80305420 80305893 - Etfdh protein_coding processed_transcript MGP_LPJ_T0010515.1 MGP_LPJ_G0008633.1 mouse_genomes_project 3 635020 635112 + Gm23237 miRNA miRNA MGP_LPJ_T0004255.1 MGP_LPJ_G0003745.1 mouse_genomes_project 3 51060607 51066957 + Gm37229 antisense antisense MGP_LPJ_T0060621.1 MGP_LPJ_G0027136.1 mouse_genomes_project 3 50714614 50724782 + Rab33b protein_coding processed_transcript MGP_LPJ_T0060622.1 MGP_LPJ_G0027136.1 mouse_genomes_project 3 50714624 50715219 + MGP_LPJ_P0060622 Rab33b protein_coding protein_coding MGP_LPJ_T0060623.1 MGP_LPJ_G0027136.1 mouse_genomes_project 3 50714658 50727648 + MGP_LPJ_P0060623 Rab33b protein_coding protein_coding MGP_LPJ_T0060916.1 MGP_LPJ_G0027200.1 mouse_genomes_project 3 63810140 63824819 - MGP_LPJ_P0060916 E130311K13Rik protein_coding protein_coding MGP_LPJ_T0060917.1 MGP_LPJ_G0027200.1 mouse_genomes_project 3 63819347 63824738 - E130311K13Rik protein_coding processed_transcript MGP_LPJ_T0060918.1 MGP_LPJ_G0027200.1 mouse_genomes_project 3 63822138 63824738 - E130311K13Rik protein_coding retained_intron MGP_LPJ_T0062186.1 MGP_LPJ_G0027498.1 mouse_genomes_project 3 97115010 97115951 - Scnm1 protein_coding retained_intron MGP_LPJ_T0062187.1 MGP_LPJ_G0027498.1 mouse_genomes_project 3 97115011 97119158 - Scnm1 protein_coding retained_intron MGP_LPJ_T0062188.1 MGP_LPJ_G0027498.1 mouse_genomes_project 3 97115013 97115580 - Scnm1 protein_coding retained_intron MGP_LPJ_T0062189.1 MGP_LPJ_G0027498.1 mouse_genomes_project 3 97115015 97115753 - Scnm1 protein_coding retained_intron MGP_LPJ_T0062190.1 MGP_LPJ_G0027498.1 mouse_genomes_project 3 97115017 97116546 - Scnm1 protein_coding processed_transcript MGP_LPJ_T0062191.1 MGP_LPJ_G0027498.1 mouse_genomes_project 3 97115020 97119396 - MGP_LPJ_P0062191 Scnm1 protein_coding protein_coding MGP_LPJ_T0062192.1 MGP_LPJ_G0027498.1 mouse_genomes_project 3 97115075 97121717 - MGP_LPJ_P0062192 Scnm1 protein_coding protein_coding MGP_LPJ_T0062193.1 MGP_LPJ_G0027498.1 mouse_genomes_project 3 97115584 97119324 - Scnm1 protein_coding retained_intron MGP_LPJ_T0102097.1 MGP_LPJ_G0040134.1 mouse_genomes_project 3 88608687 88609212 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0061967.1 MGP_LPJ_G0027414.1 mouse_genomes_project 3 92047820 92053150 + MGP_LPJ_P0061967 S100a7a protein_coding protein_coding MGP_LPJ_T0007772.1 MGP_LPJ_G0006359.1 mouse_genomes_project 3 151248345 151260131 - Gm10636 lincRNA lincRNA MGP_LPJ_T0014161.1 MGP_LPJ_G0012252.1 mouse_genomes_project 3 101266288 101266543 + processed_pseudogene processed_pseudogene MGP_LPJ_T0061729.1 MGP_LPJ_G0027370.1 mouse_genomes_project 3 90654963 90662203 + MGP_LPJ_P0061729 unknown_likely_coding unknown_likely_coding MGP_LPJ_T0004230.1 MGP_LPJ_G0003727.1 mouse_genomes_project 3 28994334 28995305 - 4933429H19Rik antisense antisense MGP_LPJ_T0004231.1 MGP_LPJ_G0003727.1 mouse_genomes_project 3 28994878 28995301 - 4933429H19Rik antisense antisense MGP_LPJ_T0010528.1 MGP_LPJ_G0008646.1 mouse_genomes_project 3 33845311 33845403 + Gm25442 miRNA miRNA MGP_LPJ_T0001265.1 MGP_LPJ_G0001185.1 mouse_genomes_project 3 65522375 65523324 - TEC TEC MGP_LPJ_T0061008.1 MGP_LPJ_G0027224.1 mouse_genomes_project 3 69025851 69028201 - MGP_LPJ_P0061008 Gm17641 protein_coding protein_coding MGP_LPJ_T0010537.1 MGP_LPJ_G0008655.1 mouse_genomes_project 3 69167667 69167731 + Mir15b miRNA miRNA MGP_LPJ_T0004429.1 MGP_LPJ_G0003864.1 mouse_genomes_project 3 159124065 159141438 - Asb17os antisense antisense MGP_LPJ_T0004430.1 MGP_LPJ_G0003864.1 mouse_genomes_project 3 159139601 159141461 - Asb17os antisense antisense MGP_LPJ_T0062194.1 MGP_LPJ_G0027499.1 mouse_genomes_project 3 97119472 97130412 + MGP_LPJ_P0062194 protein_coding protein_coding MGP_LPJ_T0013998.1 MGP_LPJ_G0012089.1 mouse_genomes_project 3 50588925 50589310 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062621.1 MGP_LPJ_G0027601.1 mouse_genomes_project 3 103903676 103906134 + Igsf3 protein_coding retained_intron MGP_LPJ_T0062622.1 MGP_LPJ_G0027601.1 mouse_genomes_project 3 103903676 103991166 + MGP_LPJ_P0062622 Igsf3 protein_coding protein_coding MGP_LPJ_T0062623.1 MGP_LPJ_G0027601.1 mouse_genomes_project 3 103904931 103988260 + MGP_LPJ_P0062623 Igsf3 protein_coding protein_coding MGP_LPJ_T0001270.1 MGP_LPJ_G0001190.1 mouse_genomes_project 3 67556112 67557953 + TEC TEC MGP_LPJ_T0014013.1 MGP_LPJ_G0012104.1 mouse_genomes_project 3 56884533 56885580 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001323.1 MGP_LPJ_G0001243.1 mouse_genomes_project 3 120018754 120021116 - TEC TEC MGP_LPJ_T0061601.1 MGP_LPJ_G0027351.1 mouse_genomes_project 3 90361288 90369660 - MGP_LPJ_P0061601 Fdps protein_coding protein_coding MGP_LPJ_T0061602.1 MGP_LPJ_G0027351.1 mouse_genomes_project 3 90361288 90369589 - MGP_LPJ_P0061602 Fdps protein_coding protein_coding MGP_LPJ_T0061603.1 MGP_LPJ_G0027351.1 mouse_genomes_project 3 90361449 90363380 - MGP_LPJ_P0061603 Fdps protein_coding protein_coding MGP_LPJ_T0061604.1 MGP_LPJ_G0027351.1 mouse_genomes_project 3 90362756 90363684 - Fdps protein_coding retained_intron MGP_LPJ_T0061605.1 MGP_LPJ_G0027351.1 mouse_genomes_project 3 90363064 90369016 - MGP_LPJ_P0061605 Fdps protein_coding protein_coding MGP_LPJ_T0061606.1 MGP_LPJ_G0027351.1 mouse_genomes_project 3 90363299 90369553 - MGP_LPJ_P0061606 Fdps protein_coding protein_coding MGP_LPJ_T0061607.1 MGP_LPJ_G0027351.1 mouse_genomes_project 3 90366639 90369592 - Fdps protein_coding retained_intron MGP_LPJ_T0014185.1 MGP_LPJ_G0012276.1 mouse_genomes_project 3 106544267 106544731 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060755.1 MGP_LPJ_G0027162.1 mouse_genomes_project 3 54914151 54924405 - MGP_LPJ_P0060755 Gm21954 protein_coding protein_coding MGP_LPJ_T0059897.1 MGP_LPJ_G0026993.1 mouse_genomes_project 3 6667563 6702404 + MGP_LPJ_P0059897 Zbtb10 protein_coding protein_coding MGP_LPJ_T0001419.1 MGP_LPJ_G0001338.1 mouse_genomes_project 3 160450129 160452920 + TEC TEC MGP_LPJ_T0063577.1 MGP_LPJ_G0027796.1 mouse_genomes_project 3 133709138 133815568 + MGP_LPJ_P0063577 Elovl6 protein_coding protein_coding MGP_LPJ_T0063578.1 MGP_LPJ_G0027796.1 mouse_genomes_project 3 133709185 133810653 + MGP_LPJ_P0063578 Elovl6 protein_coding protein_coding MGP_LPJ_T0063579.1 MGP_LPJ_G0027796.1 mouse_genomes_project 3 133728825 133805419 + MGP_LPJ_P0063579 Elovl6 protein_coding protein_coding MGP_LPJ_T0098557.1 MGP_LPJ_G0036831.1 mouse_genomes_project 3 104703143 104706025 + 4632404M16Rik sense_intronic sense_intronic MGP_LPJ_T0062510.1 MGP_LPJ_G0027568.1 mouse_genomes_project 3 99766398 99819558 - MGP_LPJ_P0062510 Chd1l protein_coding protein_coding MGP_LPJ_T0062511.1 MGP_LPJ_G0027568.1 mouse_genomes_project 3 99766671 99819559 - MGP_LPJ_P0062511 Chd1l protein_coding unknown_likely_coding MGP_LPJ_T0062512.1 MGP_LPJ_G0027568.1 mouse_genomes_project 3 99769027 99774160 - Chd1l protein_coding retained_intron MGP_LPJ_T0062513.1 MGP_LPJ_G0027568.1 mouse_genomes_project 3 99778082 99819547 - Chd1l protein_coding retained_intron MGP_LPJ_T0098587.1 MGP_LPJ_G0036861.1 mouse_genomes_project 3 108565219 108567372 - Gm43330 sense_intronic sense_intronic MGP_LPJ_T0014055.1 MGP_LPJ_G0012146.1 mouse_genomes_project 3 67025608 67025930 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013970.1 MGP_LPJ_G0012061.1 mouse_genomes_project 3 40233280 40233743 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001432.1 MGP_LPJ_G0001351.1 mouse_genomes_project 3 163977912 163978937 + TEC TEC MGP_LPJ_T0007688.1 MGP_LPJ_G0006290.1 mouse_genomes_project 3 120541217 120563489 - 1700061I17Rik lincRNA lincRNA MGP_LPJ_T0061254.1 MGP_LPJ_G0027284.1 mouse_genomes_project 3 86521994 86600832 + MGP_LPJ_P0061254 Gatb protein_coding protein_coding MGP_LPJ_T0061255.1 MGP_LPJ_G0027284.1 mouse_genomes_project 3 86521994 86591788 + MGP_LPJ_P0061255 Gatb protein_coding protein_coding MGP_LPJ_T0061256.1 MGP_LPJ_G0027284.1 mouse_genomes_project 3 86522002 86598043 + MGP_LPJ_P0061256 Gatb protein_coding protein_coding MGP_LPJ_T0061257.1 MGP_LPJ_G0027284.1 mouse_genomes_project 3 86522007 86524980 + Gatb protein_coding processed_transcript MGP_LPJ_T0061258.1 MGP_LPJ_G0027284.1 mouse_genomes_project 3 86522019 86599062 + MGP_LPJ_P0061258 Gatb protein_coding unknown_likely_coding MGP_LPJ_T0061259.1 MGP_LPJ_G0027284.1 mouse_genomes_project 3 86522070 86599368 + Gatb protein_coding processed_transcript MGP_LPJ_T0098577.1 MGP_LPJ_G0036851.1 mouse_genomes_project 3 107166605 107170177 - A530041M06Rik sense_intronic sense_intronic MGP_LPJ_T0062865.1 MGP_LPJ_G0027649.1 mouse_genomes_project 3 108712002 108721852 - MGP_LPJ_P0062865 I830077J02Rik protein_coding protein_coding MGP_LPJ_T0062866.1 MGP_LPJ_G0027649.1 mouse_genomes_project 3 108714061 108715661 - MGP_LPJ_P0062866 I830077J02Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0062867.1 MGP_LPJ_G0027649.1 mouse_genomes_project 3 108715347 108721804 - I830077J02Rik protein_coding retained_intron MGP_LPJ_T0001313.1 MGP_LPJ_G0001233.1 mouse_genomes_project 3 109592991 109597669 + TEC TEC MGP_LPJ_T0063088.1 MGP_LPJ_G0027707.1 mouse_genomes_project 3 111549640 111560432 + Taf13 protein_coding processed_transcript MGP_LPJ_T0063089.1 MGP_LPJ_G0027707.1 mouse_genomes_project 3 111549641 111561939 + Taf13 protein_coding processed_transcript MGP_LPJ_T0063090.1 MGP_LPJ_G0027707.1 mouse_genomes_project 3 111549641 111563092 + MGP_LPJ_P0063090 Taf13 protein_coding protein_coding MGP_LPJ_T0063091.1 MGP_LPJ_G0027707.1 mouse_genomes_project 3 111549653 111551247 + Taf13 protein_coding retained_intron MGP_LPJ_T0099435.1 MGP_LPJ_G0037698.1 mouse_genomes_project 3 111469915 111470038 + Gm23336 snRNA snRNA MGP_LPJ_T0063911.1 MGP_LPJ_G0027863.1 mouse_genomes_project 3 146062670 146437937 + MGP_LPJ_P0063911 Unc5c protein_coding protein_coding MGP_LPJ_T0063912.1 MGP_LPJ_G0027863.1 mouse_genomes_project 3 146063028 146432486 + MGP_LPJ_P0063912 Unc5c protein_coding protein_coding MGP_LPJ_T0063913.1 MGP_LPJ_G0027863.1 mouse_genomes_project 3 146063053 146263431 + Unc5c protein_coding processed_transcript MGP_LPJ_T0063914.1 MGP_LPJ_G0027863.1 mouse_genomes_project 3 146063053 146068393 + Unc5c protein_coding retained_intron MGP_LPJ_T0063915.1 MGP_LPJ_G0027863.1 mouse_genomes_project 3 146063053 146285042 + Unc5c protein_coding retained_intron MGP_LPJ_T0063916.1 MGP_LPJ_G0027863.1 mouse_genomes_project 3 146063053 146432438 + MGP_LPJ_P0063916 Unc5c protein_coding protein_coding MGP_LPJ_T0063917.1 MGP_LPJ_G0027863.1 mouse_genomes_project 3 146063125 146433555 + MGP_LPJ_P0063917 Unc5c protein_coding nonsense_mediated_decay MGP_LPJ_T0063918.1 MGP_LPJ_G0027863.1 mouse_genomes_project 3 146392876 146395071 + Unc5c protein_coding retained_intron MGP_LPJ_T0099420.1 MGP_LPJ_G0037683.1 mouse_genomes_project 3 91934684 91934790 + Gm24593 snRNA snRNA MGP_LPJ_T0063351.1 MGP_LPJ_G0027760.1 mouse_genomes_project 3 125457514 125469459 + MGP_LPJ_P0063351 F3 protein_coding protein_coding MGP_LPJ_T0063352.1 MGP_LPJ_G0027760.1 mouse_genomes_project 3 125457547 125463515 + F3 protein_coding processed_transcript MGP_LPJ_T0063353.1 MGP_LPJ_G0027760.1 mouse_genomes_project 3 125463302 125466133 + F3 protein_coding retained_intron MGP_LPJ_T0063354.1 MGP_LPJ_G0027760.1 mouse_genomes_project 3 125463526 125469459 + MGP_LPJ_P0063354 F3 protein_coding protein_coding MGP_LPJ_T0014046.1 MGP_LPJ_G0012137.1 mouse_genomes_project 3 65985936 65986360 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001428.1 MGP_LPJ_G0001347.1 mouse_genomes_project 3 163522985 163525455 - TEC TEC MGP_LPJ_T0001204.1 MGP_LPJ_G0001126.1 mouse_genomes_project 3 44380454 44382860 + TEC TEC MGP_LPJ_T0062855.1 MGP_LPJ_G0027647.1 mouse_genomes_project 3 108655526 108694378 + MGP_LPJ_P0062855 Adora3 protein_coding protein_coding MGP_LPJ_T0062860.1 MGP_LPJ_G0027647.1 mouse_genomes_project 3 108690445 108694951 + MGP_LPJ_P0062860 Adora3 protein_coding protein_coding MGP_LPJ_T0062862.1 MGP_LPJ_G0027647.1 mouse_genomes_project 3 108690719 108692382 + Adora3 protein_coding retained_intron MGP_LPJ_T0004385.1 MGP_LPJ_G0003832.1 mouse_genomes_project 3 128305941 128307699 + Gm42823 antisense antisense MGP_LPJ_T0061753.1 MGP_LPJ_G0027376.1 mouse_genomes_project 3 90725628 90728158 + Pygo2 protein_coding processed_transcript MGP_LPJ_T0061754.1 MGP_LPJ_G0027376.1 mouse_genomes_project 3 90725675 90730543 + MGP_LPJ_P0061754 Pygo2 protein_coding protein_coding MGP_LPJ_T0061755.1 MGP_LPJ_G0027376.1 mouse_genomes_project 3 90725838 90726584 + Pygo2 protein_coding processed_transcript MGP_LPJ_T0061756.1 MGP_LPJ_G0027376.1 mouse_genomes_project 3 90726154 90728097 + Pygo2 protein_coding processed_transcript MGP_LPJ_T0061757.1 MGP_LPJ_G0027376.1 mouse_genomes_project 3 90726251 90730543 + MGP_LPJ_P0061757 Pygo2 protein_coding protein_coding MGP_LPJ_T0061758.1 MGP_LPJ_G0027376.1 mouse_genomes_project 3 90726446 90728407 + Pygo2 protein_coding processed_transcript MGP_LPJ_T0061168.1 MGP_LPJ_G0027262.1 mouse_genomes_project 3 82892273 82946762 - MGP_LPJ_P0061168 Gucy1a3 protein_coding protein_coding MGP_LPJ_T0061169.1 MGP_LPJ_G0027262.1 mouse_genomes_project 3 82892283 82947476 - MGP_LPJ_P0061169 Gucy1a3 protein_coding protein_coding MGP_LPJ_T0061170.1 MGP_LPJ_G0027262.1 mouse_genomes_project 3 82894398 82901856 - MGP_LPJ_P0061170 Gucy1a3 protein_coding protein_coding MGP_LPJ_T0061171.1 MGP_LPJ_G0027262.1 mouse_genomes_project 3 82906534 82947478 - Gucy1a3 protein_coding retained_intron MGP_LPJ_T0061172.1 MGP_LPJ_G0027262.1 mouse_genomes_project 3 82918933 82947294 - Gucy1a3 protein_coding processed_transcript MGP_LPJ_T0004415.1 MGP_LPJ_G0003852.1 mouse_genomes_project 3 146047983 146062788 - antisense antisense MGP_LPJ_T0001244.1 MGP_LPJ_G0001164.1 mouse_genomes_project 3 52434883 52435707 + TEC TEC MGP_LPJ_T0001141.1 MGP_LPJ_G0001063.1 mouse_genomes_project 3 6107979 6110945 - TEC TEC MGP_LPJ_T0014319.1 MGP_LPJ_G0012410.1 mouse_genomes_project 3 149479795 149481470 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001214.1 MGP_LPJ_G0001136.1 mouse_genomes_project 3 50108383 50111022 - TEC TEC MGP_LPJ_T0063960.1 MGP_LPJ_G0027873.1 mouse_genomes_project 3 147432697 147530074 - MGP_LPJ_P0063960 Pkn2 protein_coding protein_coding MGP_LPJ_T0063961.1 MGP_LPJ_G0027873.1 mouse_genomes_project 3 147435506 147529985 - MGP_LPJ_P0063961 Pkn2 protein_coding nonsense_mediated_decay MGP_LPJ_T0063962.1 MGP_LPJ_G0027873.1 mouse_genomes_project 3 147435608 147529728 - MGP_LPJ_P0063962 Pkn2 protein_coding protein_coding MGP_LPJ_T0063963.1 MGP_LPJ_G0027873.1 mouse_genomes_project 3 147435608 147529728 - MGP_LPJ_P0063963 Pkn2 protein_coding protein_coding MGP_LPJ_T0063964.1 MGP_LPJ_G0027873.1 mouse_genomes_project 3 147441749 147529990 - Pkn2 protein_coding processed_transcript MGP_LPJ_T0063965.1 MGP_LPJ_G0027873.1 mouse_genomes_project 3 147441831 147444899 - Pkn2 protein_coding retained_intron MGP_LPJ_T0063966.1 MGP_LPJ_G0027873.1 mouse_genomes_project 3 147446258 147530060 - Pkn2 protein_coding processed_transcript MGP_LPJ_T0063967.1 MGP_LPJ_G0027873.1 mouse_genomes_project 3 147451617 147463574 - MGP_LPJ_P0063967 Pkn2 protein_coding nonsense_mediated_decay MGP_LPJ_T0063968.1 MGP_LPJ_G0027873.1 mouse_genomes_project 3 147452734 147454558 - Pkn2 protein_coding retained_intron MGP_LPJ_T0063969.1 MGP_LPJ_G0027873.1 mouse_genomes_project 3 147453528 147471524 - MGP_LPJ_P0063969 Pkn2 protein_coding protein_coding MGP_LPJ_T0063970.1 MGP_LPJ_G0027873.1 mouse_genomes_project 3 147463284 147471487 - Pkn2 protein_coding retained_intron MGP_LPJ_T0063971.1 MGP_LPJ_G0027873.1 mouse_genomes_project 3 147472454 147530053 - Pkn2 protein_coding retained_intron MGP_LPJ_T0063972.1 MGP_LPJ_G0027873.1 mouse_genomes_project 3 147499348 147502141 - Pkn2 protein_coding retained_intron MGP_LPJ_T0007628.1 MGP_LPJ_G0006239.1 mouse_genomes_project 3 89704462 89705749 - Gm37584 lincRNA lincRNA MGP_LPJ_T0013951.1 MGP_LPJ_G0012042.1 mouse_genomes_project 3 34956021 34956520 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017929.1 MGP_LPJ_G0015433.1 mouse_genomes_project 3 109322753 109326680 - 2010016I18Rik processed_transcript antisense MGP_LPJ_T0017930.1 MGP_LPJ_G0015433.1 mouse_genomes_project 3 109322771 109324601 - 2010016I18Rik processed_transcript antisense MGP_LPJ_T0017931.1 MGP_LPJ_G0015433.1 mouse_genomes_project 3 109322784 109324228 - 2010016I18Rik processed_transcript retained_intron MGP_LPJ_T0017932.1 MGP_LPJ_G0015433.1 mouse_genomes_project 3 109322784 109324209 - 2010016I18Rik processed_transcript processed_transcript MGP_LPJ_T0017933.1 MGP_LPJ_G0015433.1 mouse_genomes_project 3 109324836 109326615 - 2010016I18Rik processed_transcript retained_intron MGP_LPJ_T0099399.1 MGP_LPJ_G0037662.1 mouse_genomes_project 3 65551995 65552088 + Gm22279 snRNA snRNA MGP_LPJ_T0007610.1 MGP_LPJ_G0006231.1 mouse_genomes_project 3 84367250 84389486 - 1700028M03Rik lincRNA lincRNA MGP_LPJ_T0007753.1 MGP_LPJ_G0006343.1 mouse_genomes_project 3 148029315 148032647 + Gm43612 lincRNA lincRNA MGP_LPJ_T0062168.1 MGP_LPJ_G0027495.1 mouse_genomes_project 3 97035972 97087680 - MGP_LPJ_P0062168 Pip5k1a protein_coding protein_coding MGP_LPJ_T0062169.1 MGP_LPJ_G0027495.1 mouse_genomes_project 3 97035985 97087735 - MGP_LPJ_P0062169 Pip5k1a protein_coding protein_coding MGP_LPJ_T0062170.1 MGP_LPJ_G0027495.1 mouse_genomes_project 3 97035987 97087661 - MGP_LPJ_P0062170 Pip5k1a protein_coding protein_coding MGP_LPJ_T0062171.1 MGP_LPJ_G0027495.1 mouse_genomes_project 3 97036011 97087584 - MGP_LPJ_P0062171 Pip5k1a protein_coding protein_coding MGP_LPJ_T0062172.1 MGP_LPJ_G0027495.1 mouse_genomes_project 3 97048524 97056797 - Pip5k1a protein_coding processed_transcript MGP_LPJ_T0062173.1 MGP_LPJ_G0027495.1 mouse_genomes_project 3 97056385 97061550 - Pip5k1a protein_coding retained_intron MGP_LPJ_T0062174.1 MGP_LPJ_G0027495.1 mouse_genomes_project 3 97076613 97087628 - Pip5k1a protein_coding processed_transcript MGP_LPJ_T0063445.1 MGP_LPJ_G0027777.1 mouse_genomes_project 3 127291288 127355296 + MGP_LPJ_P0063445 Prss12 protein_coding protein_coding MGP_LPJ_T0060609.1 MGP_LPJ_G0027134.1 mouse_genomes_project 3 50626079 50630390 - MGP_LPJ_P0060609 Ndufc1 protein_coding protein_coding MGP_LPJ_T0060610.1 MGP_LPJ_G0027134.1 mouse_genomes_project 3 50626859 50628883 - Ndufc1 protein_coding retained_intron MGP_LPJ_T0060611.1 MGP_LPJ_G0027134.1 mouse_genomes_project 3 50626882 50630068 - Ndufc1 protein_coding processed_transcript MGP_LPJ_T0060612.1 MGP_LPJ_G0027134.1 mouse_genomes_project 3 50626986 50630366 - MGP_LPJ_P0060612 Ndufc1 protein_coding protein_coding MGP_LPJ_T0010559.1 MGP_LPJ_G0008677.1 mouse_genomes_project 3 99906307 99906361 - Mir7225 miRNA miRNA MGP_LPJ_T0014058.1 MGP_LPJ_G0012149.1 mouse_genomes_project 3 67834762 67836092 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014016.1 MGP_LPJ_G0012107.1 mouse_genomes_project 3 57301483 57303301 - processed_pseudogene processed_pseudogene MGP_LPJ_T0061348.1 MGP_LPJ_G0027304.1 mouse_genomes_project 3 88882952 88903472 + MGP_LPJ_P0061348 Insrr protein_coding protein_coding MGP_LPJ_T0061349.1 MGP_LPJ_G0027304.1 mouse_genomes_project 3 88882966 88892488 + Insrr protein_coding retained_intron MGP_LPJ_T0061350.1 MGP_LPJ_G0027304.1 mouse_genomes_project 3 88883095 88903423 + MGP_LPJ_P0061350 Insrr protein_coding protein_coding MGP_LPJ_T0061351.1 MGP_LPJ_G0027304.1 mouse_genomes_project 3 88889325 88890191 + Insrr protein_coding processed_transcript MGP_LPJ_T0014024.1 MGP_LPJ_G0012115.1 mouse_genomes_project 3 59069920 59072168 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062490.1 MGP_LPJ_G0027564.1 mouse_genomes_project 3 99090898 99105271 - MGP_LPJ_P0062490 Gja8 protein_coding protein_coding MGP_LPJ_T0102112.1 MGP_LPJ_G0040149.1 mouse_genomes_project 3 100926750 100944415 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0061244.1 MGP_LPJ_G0027281.1 mouse_genomes_project 3 85493828 85497287 + MGP_LPJ_P0061244 Tigd4 protein_coding protein_coding MGP_LPJ_T0100697.1 MGP_LPJ_G0038960.1 mouse_genomes_project 3 101557506 101557623 - Gm24216 snoRNA snoRNA MGP_LPJ_T0061730.1 MGP_LPJ_G0027371.1 mouse_genomes_project 3 90668193 90677736 - MGP_LPJ_P0061730 Zbtb7b protein_coding protein_coding MGP_LPJ_T0061731.1 MGP_LPJ_G0027371.1 mouse_genomes_project 3 90668193 90685183 - MGP_LPJ_P0061731 Zbtb7b protein_coding protein_coding MGP_LPJ_T0061732.1 MGP_LPJ_G0027371.1 mouse_genomes_project 3 90668193 90683989 - MGP_LPJ_P0061732 Zbtb7b protein_coding protein_coding MGP_LPJ_T0061733.1 MGP_LPJ_G0027371.1 mouse_genomes_project 3 90668193 90678218 - MGP_LPJ_P0061733 Zbtb7b protein_coding protein_coding MGP_LPJ_T0061734.1 MGP_LPJ_G0027371.1 mouse_genomes_project 3 90671687 90685465 - MGP_LPJ_P0061734 Zbtb7b protein_coding protein_coding MGP_LPJ_T0061735.1 MGP_LPJ_G0027371.1 mouse_genomes_project 3 90671971 90685422 - MGP_LPJ_P0061735 Zbtb7b protein_coding protein_coding MGP_LPJ_T0061736.1 MGP_LPJ_G0027371.1 mouse_genomes_project 3 90684432 90686563 - Zbtb7b protein_coding processed_transcript MGP_LPJ_T0061419.1 MGP_LPJ_G0027322.1 mouse_genomes_project 3 89410133 89440790 - MGP_LPJ_P0061419 Tsacc protein_coding protein_coding MGP_LPJ_T0061420.1 MGP_LPJ_G0027322.1 mouse_genomes_project 3 89410136 89440629 - MGP_LPJ_P0061420 Tsacc protein_coding protein_coding MGP_LPJ_T0014244.1 MGP_LPJ_G0012335.1 mouse_genomes_project 3 125944969 125946476 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014336.1 MGP_LPJ_G0012427.1 mouse_genomes_project 3 159035868 159036161 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014217.1 MGP_LPJ_G0012308.1 mouse_genomes_project 3 116350590 116350987 - processed_pseudogene processed_pseudogene MGP_LPJ_T0062579.1 MGP_LPJ_G0027590.1 mouse_genomes_project 3 102345434 102417187 + Spag17 protein_coding processed_transcript MGP_LPJ_T0062580.1 MGP_LPJ_G0027590.1 mouse_genomes_project 3 102345445 102602137 + MGP_LPJ_P0062580 Spag17 protein_coding protein_coding MGP_LPJ_T0062581.1 MGP_LPJ_G0027590.1 mouse_genomes_project 3 102480480 102485493 + Spag17 protein_coding retained_intron MGP_LPJ_T0062582.1 MGP_LPJ_G0027590.1 mouse_genomes_project 3 102485436 102497667 + Spag17 protein_coding retained_intron MGP_LPJ_T0013943.1 MGP_LPJ_G0012034.1 mouse_genomes_project 3 32141168 32144114 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013958.1 MGP_LPJ_G0012049.1 mouse_genomes_project 3 35957681 35958000 + processed_pseudogene processed_pseudogene MGP_LPJ_T0060054.1 MGP_LPJ_G0027039.1 mouse_genomes_project 3 18118003 18120700 - Cpb1 protein_coding retained_intron MGP_LPJ_T0060055.1 MGP_LPJ_G0027039.1 mouse_genomes_project 3 18118028 18144540 - MGP_LPJ_P0060055 Cpb1 protein_coding protein_coding MGP_LPJ_T0060056.1 MGP_LPJ_G0027039.1 mouse_genomes_project 3 18132988 18135254 - Cpb1 protein_coding processed_transcript MGP_LPJ_T0062736.1 MGP_LPJ_G0027621.1 mouse_genomes_project 3 106349739 106362295 - Olfml3 protein_coding processed_transcript MGP_LPJ_T0062737.1 MGP_LPJ_G0027621.1 mouse_genomes_project 3 106359732 106366062 - MGP_LPJ_P0062737 Olfml3 protein_coding protein_coding MGP_LPJ_T0062738.1 MGP_LPJ_G0027621.1 mouse_genomes_project 3 106359748 106360622 - MGP_LPJ_P0062738 Olfml3 protein_coding protein_coding MGP_LPJ_T0062739.1 MGP_LPJ_G0027621.1 mouse_genomes_project 3 106361765 106366029 - Olfml3 protein_coding retained_intron MGP_LPJ_T0060903.1 MGP_LPJ_G0027199.1 mouse_genomes_project 3 63569183 63738645 - MGP_LPJ_P0060903 Plch1 protein_coding protein_coding MGP_LPJ_T0060904.1 MGP_LPJ_G0027199.1 mouse_genomes_project 3 63569183 63738597 - MGP_LPJ_P0060904 Plch1 protein_coding protein_coding MGP_LPJ_T0060905.1 MGP_LPJ_G0027199.1 mouse_genomes_project 3 63569186 63575304 - Plch1 protein_coding retained_intron MGP_LPJ_T0060906.1 MGP_LPJ_G0027199.1 mouse_genomes_project 3 63569186 63620688 - Plch1 protein_coding retained_intron MGP_LPJ_T0060907.1 MGP_LPJ_G0027199.1 mouse_genomes_project 3 63569186 63738863 - MGP_LPJ_P0060907 Plch1 protein_coding protein_coding MGP_LPJ_T0060908.1 MGP_LPJ_G0027199.1 mouse_genomes_project 3 63569186 63738889 - MGP_LPJ_P0060908 Plch1 protein_coding protein_coding MGP_LPJ_T0060909.1 MGP_LPJ_G0027199.1 mouse_genomes_project 3 63569186 63738597 - MGP_LPJ_P0060909 Plch1 protein_coding protein_coding MGP_LPJ_T0060910.1 MGP_LPJ_G0027199.1 mouse_genomes_project 3 63569187 63738597 - MGP_LPJ_P0060910 Plch1 protein_coding protein_coding MGP_LPJ_T0060911.1 MGP_LPJ_G0027199.1 mouse_genomes_project 3 63569680 63794134 - MGP_LPJ_P0060911 Plch1 protein_coding protein_coding MGP_LPJ_T0060912.1 MGP_LPJ_G0027199.1 mouse_genomes_project 3 63571882 63574993 - MGP_LPJ_P0060912 Plch1 protein_coding protein_coding MGP_LPJ_T0060913.1 MGP_LPJ_G0027199.1 mouse_genomes_project 3 63574765 63738965 - MGP_LPJ_P0060913 Plch1 protein_coding protein_coding MGP_LPJ_T0060914.1 MGP_LPJ_G0027199.1 mouse_genomes_project 3 63669062 63794104 - MGP_LPJ_P0060914 Plch1 protein_coding protein_coding MGP_LPJ_T0060915.1 MGP_LPJ_G0027199.1 mouse_genomes_project 3 63761735 63794035 - MGP_LPJ_P0060915 Plch1 protein_coding protein_coding MGP_LPJ_T0014180.1 MGP_LPJ_G0012271.1 mouse_genomes_project 3 105409132 105409540 + processed_pseudogene processed_pseudogene MGP_LPJ_T0063286.1 MGP_LPJ_G0027747.1 mouse_genomes_project 3 120391572 120445732 - MGP_LPJ_P0063286 Palmd protein_coding protein_coding MGP_LPJ_T0063287.1 MGP_LPJ_G0027747.1 mouse_genomes_project 3 120395000 120445603 - MGP_LPJ_P0063287 Palmd protein_coding protein_coding MGP_LPJ_T0063288.1 MGP_LPJ_G0027747.1 mouse_genomes_project 3 120400475 120445731 - MGP_LPJ_P0063288 Palmd protein_coding protein_coding MGP_LPJ_T0063289.1 MGP_LPJ_G0027747.1 mouse_genomes_project 3 120441807 120445488 - Palmd protein_coding retained_intron MGP_LPJ_T0004305.1 MGP_LPJ_G0003782.1 mouse_genomes_project 3 91828110 91833972 + Gm16048 antisense antisense MGP_LPJ_T0010578.1 MGP_LPJ_G0008696.1 mouse_genomes_project 3 139445407 139445513 + Gm24048 miRNA miRNA MGP_LPJ_T0014290.1 MGP_LPJ_G0012381.1 mouse_genomes_project 3 139824321 139824558 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017926.1 MGP_LPJ_G0015431.1 mouse_genomes_project 3 107447576 107476289 - Gm43584 processed_transcript processed_transcript MGP_LPJ_T0014182.1 MGP_LPJ_G0012273.1 mouse_genomes_project 3 105754926 105755681 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014281.1 MGP_LPJ_G0012372.1 mouse_genomes_project 3 139271297 139271814 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014259.1 MGP_LPJ_G0012350.1 mouse_genomes_project 3 131753806 131756768 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010567.1 MGP_LPJ_G0008685.1 mouse_genomes_project 3 122020136 122020246 + Gm24155 miRNA miRNA MGP_LPJ_T0014287.1 MGP_LPJ_G0012378.1 mouse_genomes_project 3 139824316 139824558 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014069.1 MGP_LPJ_G0012160.1 mouse_genomes_project 3 70182002 70183335 + processed_pseudogene processed_pseudogene MGP_LPJ_T0061567.1 MGP_LPJ_G0027345.1 mouse_genomes_project 3 89975538 90179403 + MGP_LPJ_P0061567 Gon4l protein_coding protein_coding MGP_LPJ_T0061568.1 MGP_LPJ_G0027345.1 mouse_genomes_project 3 89977328 90179398 + MGP_LPJ_P0061568 Gon4l protein_coding protein_coding MGP_LPJ_T0061569.1 MGP_LPJ_G0027345.1 mouse_genomes_project 3 89977328 90179398 + MGP_LPJ_P0061569 Gon4l protein_coding protein_coding MGP_LPJ_T0061570.1 MGP_LPJ_G0027345.1 mouse_genomes_project 3 90086866 90168810 + MGP_LPJ_P0061570 Gon4l protein_coding unknown_likely_coding MGP_LPJ_T0060925.1 MGP_LPJ_G0027205.1 mouse_genomes_project 3 64654014 64677000 - MGP_LPJ_P0060925 Vmn2r5 protein_coding protein_coding MGP_LPJ_T0061102.1 MGP_LPJ_G0027247.1 mouse_genomes_project 3 79995269 80091064 + MGP_LPJ_P0061102 protein_coding protein_coding MGP_LPJ_T0061103.1 MGP_LPJ_G0027247.1 mouse_genomes_project 3 80003621 80129513 + MGP_LPJ_P0061103 protein_coding protein_coding MGP_LPJ_T0061104.1 MGP_LPJ_G0027247.1 mouse_genomes_project 3 80003624 80092322 + MGP_LPJ_P0061104 protein_coding protein_coding MGP_LPJ_T0063673.1 MGP_LPJ_G0027816.1 mouse_genomes_project 3 136299635 136395316 + MGP_LPJ_P0063673 Dkk2 protein_coding protein_coding MGP_LPJ_T0060397.1 MGP_LPJ_G0027101.1 mouse_genomes_project 3 35213617 35285860 - MGP_LPJ_P0060397 Trpc3 protein_coding unknown_likely_coding MGP_LPJ_T0060398.1 MGP_LPJ_G0027101.1 mouse_genomes_project 3 35213623 35286048 - MGP_LPJ_P0060398 Trpc3 protein_coding protein_coding MGP_LPJ_T0060399.1 MGP_LPJ_G0027101.1 mouse_genomes_project 3 35213704 35214506 - Trpc3 protein_coding processed_transcript MGP_LPJ_T0060400.1 MGP_LPJ_G0027101.1 mouse_genomes_project 3 35213704 35214484 - Trpc3 protein_coding processed_transcript MGP_LPJ_T0060401.1 MGP_LPJ_G0027101.1 mouse_genomes_project 3 35233012 35235261 - Trpc3 protein_coding retained_intron MGP_LPJ_T0060402.1 MGP_LPJ_G0027101.1 mouse_genomes_project 3 35264745 35286048 - Trpc3 protein_coding retained_intron MGP_LPJ_T0063825.1 MGP_LPJ_G0027843.1 mouse_genomes_project 3 142295959 142350232 + MGP_LPJ_P0063825 Dnajb14 protein_coding protein_coding MGP_LPJ_T0063826.1 MGP_LPJ_G0027843.1 mouse_genomes_project 3 142296171 142328284 + Dnajb14 protein_coding retained_intron MGP_LPJ_T0063827.1 MGP_LPJ_G0027843.1 mouse_genomes_project 3 142296465 142334256 + MGP_LPJ_P0063827 Dnajb14 protein_coding protein_coding MGP_LPJ_T0063828.1 MGP_LPJ_G0027843.1 mouse_genomes_project 3 142337228 142340928 + Dnajb14 protein_coding retained_intron MGP_LPJ_T0001209.1 MGP_LPJ_G0001131.1 mouse_genomes_project 3 49620493 49624493 - TEC TEC MGP_LPJ_T0001308.1 MGP_LPJ_G0001228.1 mouse_genomes_project 3 100370546 100373609 + TEC TEC MGP_LPJ_T0102107.1 MGP_LPJ_G0040144.1 mouse_genomes_project 3 96156106 96156301 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0014106.1 MGP_LPJ_G0012197.1 mouse_genomes_project 3 85454606 85455597 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014032.1 MGP_LPJ_G0012123.1 mouse_genomes_project 3 60560282 60560852 - processed_pseudogene processed_pseudogene MGP_LPJ_T0062039.1 MGP_LPJ_G0027471.1 mouse_genomes_project 3 95274211 95281070 + MGP_LPJ_P0062039 S100a11 protein_coding protein_coding MGP_LPJ_T0061767.1 MGP_LPJ_G0027379.1 mouse_genomes_project 3 90820466 90971410 + MGP_LPJ_P0061767 Kcnn3 protein_coding protein_coding MGP_LPJ_T0061768.1 MGP_LPJ_G0027379.1 mouse_genomes_project 3 90966166 90978783 + Kcnn3 protein_coding retained_intron MGP_LPJ_T0063115.1 MGP_LPJ_G0027712.1 mouse_genomes_project 3 111791931 111846645 - MGP_LPJ_P0063115 Stxbp3 protein_coding protein_coding MGP_LPJ_T0063116.1 MGP_LPJ_G0027712.1 mouse_genomes_project 3 111793183 111802319 - Stxbp3 protein_coding retained_intron MGP_LPJ_T0063117.1 MGP_LPJ_G0027712.1 mouse_genomes_project 3 111793627 111797569 - Stxbp3 protein_coding retained_intron MGP_LPJ_T0063118.1 MGP_LPJ_G0027712.1 mouse_genomes_project 3 111799896 111805516 - Stxbp3 protein_coding retained_intron MGP_LPJ_T0063119.1 MGP_LPJ_G0027712.1 mouse_genomes_project 3 111809384 111846585 - MGP_LPJ_P0063119 Stxbp3 protein_coding protein_coding MGP_LPJ_T0063120.1 MGP_LPJ_G0027712.1 mouse_genomes_project 3 111826062 111846649 - Stxbp3 protein_coding processed_transcript MGP_LPJ_T0063121.1 MGP_LPJ_G0027712.1 mouse_genomes_project 3 111828792 111846660 - MGP_LPJ_P0063121 Stxbp3 protein_coding protein_coding MGP_LPJ_T0063122.1 MGP_LPJ_G0027712.1 mouse_genomes_project 3 111829877 111846644 - MGP_LPJ_P0063122 Stxbp3 protein_coding protein_coding MGP_LPJ_T0001158.1 MGP_LPJ_G0001080.1 mouse_genomes_project 3 27323021 27324383 + TEC TEC MGP_LPJ_T0007584.1 MGP_LPJ_G0006210.1 mouse_genomes_project 3 69291323 69320864 + Gm1647 lincRNA lincRNA MGP_LPJ_T0014018.1 MGP_LPJ_G0012109.1 mouse_genomes_project 3 57503942 57504176 + processed_pseudogene processed_pseudogene MGP_LPJ_T0060183.1 MGP_LPJ_G0027062.1 mouse_genomes_project 3 28861714 28883235 - MGP_LPJ_P0060183 Lrrc31 protein_coding protein_coding MGP_LPJ_T0060184.1 MGP_LPJ_G0027062.1 mouse_genomes_project 3 28865336 28883248 - MGP_LPJ_P0060184 Lrrc31 protein_coding protein_coding MGP_LPJ_T0060185.1 MGP_LPJ_G0027062.1 mouse_genomes_project 3 28881351 28883173 - Lrrc31 protein_coding retained_intron MGP_LPJ_T0060186.1 MGP_LPJ_G0027062.1 mouse_genomes_project 3 28881526 28883215 - Lrrc31 protein_coding processed_transcript MGP_LPJ_T0061518.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89794588 89805422 + Arhgef2 protein_coding processed_transcript MGP_LPJ_T0061519.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89794793 89808184 + Arhgef2 protein_coding processed_transcript MGP_LPJ_T0061520.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89794925 89838812 + MGP_LPJ_P0061520 Arhgef2 protein_coding protein_coding MGP_LPJ_T0061521.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89805265 89808346 + Arhgef2 protein_coding processed_transcript MGP_LPJ_T0061522.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89805453 89825566 + MGP_LPJ_P0061522 Arhgef2 protein_coding protein_coding MGP_LPJ_T0061523.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89806211 89826470 + MGP_LPJ_P0061523 Arhgef2 protein_coding protein_coding MGP_LPJ_T0061524.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89806987 89839415 + MGP_LPJ_P0061524 Arhgef2 protein_coding protein_coding MGP_LPJ_T0061525.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89806987 89839935 + MGP_LPJ_P0061525 Arhgef2 protein_coding protein_coding MGP_LPJ_T0061526.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89807361 89838778 + MGP_LPJ_P0061526 Arhgef2 protein_coding protein_coding MGP_LPJ_T0061527.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89811982 89838746 + MGP_LPJ_P0061527 Arhgef2 protein_coding protein_coding MGP_LPJ_T0061528.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89811995 89831419 + Arhgef2 protein_coding retained_intron MGP_LPJ_T0061529.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89812116 89838746 + MGP_LPJ_P0061529 Arhgef2 protein_coding protein_coding MGP_LPJ_T0061530.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89812149 89839933 + MGP_LPJ_P0061530 Arhgef2 protein_coding protein_coding MGP_LPJ_T0061531.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89812317 89826433 + Arhgef2 protein_coding retained_intron MGP_LPJ_T0061532.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89812405 89825031 + Arhgef2 protein_coding retained_intron MGP_LPJ_T0061533.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89813316 89824897 + MGP_LPJ_P0061533 Arhgef2 protein_coding protein_coding MGP_LPJ_T0061534.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89813778 89832591 + MGP_LPJ_P0061534 Arhgef2 protein_coding protein_coding MGP_LPJ_T0061535.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89815076 89825588 + MGP_LPJ_P0061535 Arhgef2 protein_coding protein_coding MGP_LPJ_T0061536.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89821164 89824947 + MGP_LPJ_P0061536 Arhgef2 protein_coding protein_coding MGP_LPJ_T0061537.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89821191 89824072 + Arhgef2 protein_coding retained_intron MGP_LPJ_T0061538.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89821195 89824963 + MGP_LPJ_P0061538 Arhgef2 protein_coding protein_coding MGP_LPJ_T0061539.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89821293 89824305 + MGP_LPJ_P0061539 Arhgef2 protein_coding protein_coding MGP_LPJ_T0061540.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89823881 89826633 + Arhgef2 protein_coding processed_transcript MGP_LPJ_T0061541.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89824166 89825561 + Arhgef2 protein_coding retained_intron MGP_LPJ_T0061542.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89824703 89825609 + Arhgef2 protein_coding retained_intron MGP_LPJ_T0061543.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89824888 89829713 + Arhgef2 protein_coding retained_intron MGP_LPJ_T0061544.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89826293 89827047 + Arhgef2 protein_coding retained_intron MGP_LPJ_T0061545.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89834308 89835795 + Arhgef2 protein_coding retained_intron MGP_LPJ_T0061546.1 MGP_LPJ_G0027340.1 mouse_genomes_project 3 89835814 89838848 + Arhgef2 protein_coding processed_transcript MGP_LPJ_T0007729.1 MGP_LPJ_G0006322.1 mouse_genomes_project 3 138497056 138508810 + Gm43194 lincRNA lincRNA MGP_LPJ_T0007730.1 MGP_LPJ_G0006322.1 mouse_genomes_project 3 138497194 138511189 + Gm43194 lincRNA lincRNA MGP_LPJ_T0098029.1 MGP_LPJ_G0036310.1 mouse_genomes_project 3 85885494 85886019 - pseudogene pseudogene MGP_LPJ_T0062949.1 MGP_LPJ_G0027674.1 mouse_genomes_project 3 110356824 110378187 - MGP_LPJ_P0062949 Kcnc4 protein_coding protein_coding MGP_LPJ_T0001200.1 MGP_LPJ_G0001122.1 mouse_genomes_project 3 41376927 41377472 + TEC TEC MGP_LPJ_T0062908.1 MGP_LPJ_G0027661.1 mouse_genomes_project 3 109392701 109419228 + MGP_LPJ_P0062908 Dram2 protein_coding protein_coding MGP_LPJ_T0062909.1 MGP_LPJ_G0027661.1 mouse_genomes_project 3 109392730 109410154 + Dram2 protein_coding retained_intron MGP_LPJ_T0062910.1 MGP_LPJ_G0027661.1 mouse_genomes_project 3 109392734 109400196 + MGP_LPJ_P0062910 Dram2 protein_coding protein_coding MGP_LPJ_T0062911.1 MGP_LPJ_G0027661.1 mouse_genomes_project 3 109392767 109418436 + MGP_LPJ_P0062911 Dram2 protein_coding protein_coding MGP_LPJ_T0062912.1 MGP_LPJ_G0027661.1 mouse_genomes_project 3 109392773 109409995 + Dram2 protein_coding retained_intron MGP_LPJ_T0062913.1 MGP_LPJ_G0027661.1 mouse_genomes_project 3 109392775 109418436 + MGP_LPJ_P0062913 Dram2 protein_coding protein_coding MGP_LPJ_T0062914.1 MGP_LPJ_G0027661.1 mouse_genomes_project 3 109392780 109400164 + MGP_LPJ_P0062914 Dram2 protein_coding protein_coding MGP_LPJ_T0062915.1 MGP_LPJ_G0027661.1 mouse_genomes_project 3 109392780 109414562 + MGP_LPJ_P0062915 Dram2 protein_coding protein_coding MGP_LPJ_T0062916.1 MGP_LPJ_G0027661.1 mouse_genomes_project 3 109392784 109414499 + MGP_LPJ_P0062916 Dram2 protein_coding protein_coding MGP_LPJ_T0013913.1 MGP_LPJ_G0012004.1 mouse_genomes_project 3 17562045 17563096 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100671.1 MGP_LPJ_G0038934.1 mouse_genomes_project 3 55927236 55927367 - Gm25727 snoRNA snoRNA MGP_LPJ_T0098540.1 MGP_LPJ_G0036814.1 mouse_genomes_project 3 96422239 96424403 - Gm43773 sense_intronic sense_intronic MGP_LPJ_T0011568.1 MGP_LPJ_G0009686.1 mouse_genomes_project 3 160447282 160447393 + Gm26456 misc_RNA misc_RNA MGP_LPJ_T0060838.1 MGP_LPJ_G0027183.1 mouse_genomes_project 3 58844229 58847220 - MGP_LPJ_P0060838 P2ry13 protein_coding protein_coding MGP_LPJ_T0007469.1 MGP_LPJ_G0006126.1 mouse_genomes_project 3 11074497 11075881 - Gm2464 lincRNA lincRNA MGP_LPJ_T0014282.1 MGP_LPJ_G0012373.1 mouse_genomes_project 3 139419912 139420501 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017950.1 MGP_LPJ_G0015438.1 mouse_genomes_project 3 126054677 126067365 - processed_transcript retained_intron MGP_LPJ_T0063464.1 MGP_LPJ_G0027782.1 mouse_genomes_project 3 129313051 129651843 + MGP_LPJ_P0063464 Ndst4 protein_coding protein_coding MGP_LPJ_T0063465.1 MGP_LPJ_G0027782.1 mouse_genomes_project 3 129313065 129608621 + Ndst4 protein_coding retained_intron MGP_LPJ_T0063466.1 MGP_LPJ_G0027782.1 mouse_genomes_project 3 129476291 129533033 + MGP_LPJ_P0063466 Ndst4 protein_coding protein_coding MGP_LPJ_T0063467.1 MGP_LPJ_G0027782.1 mouse_genomes_project 3 129602899 129651283 + MGP_LPJ_P0063467 Ndst4 protein_coding protein_coding MGP_LPJ_T0063468.1 MGP_LPJ_G0027782.1 mouse_genomes_project 3 129602909 129612920 + Ndst4 protein_coding processed_transcript MGP_LPJ_T0063469.1 MGP_LPJ_G0027782.1 mouse_genomes_project 3 129632041 129646619 + MGP_LPJ_P0063469 Ndst4 protein_coding protein_coding MGP_LPJ_T0061198.1 MGP_LPJ_G0027271.1 mouse_genomes_project 3 83937685 84167799 + MGP_LPJ_P0061198 Dchs2 protein_coding protein_coding MGP_LPJ_T0100687.1 MGP_LPJ_G0038950.1 mouse_genomes_project 3 88094051 88094183 + Gm24472 snoRNA snoRNA MGP_LPJ_T0014054.1 MGP_LPJ_G0012145.1 mouse_genomes_project 3 66961937 66962726 + processed_pseudogene processed_pseudogene MGP_LPJ_T0061045.1 MGP_LPJ_G0027232.1 mouse_genomes_project 3 69775171 69803970 - MGP_LPJ_P0061045 B3galnt1 protein_coding protein_coding MGP_LPJ_T0062351.1 MGP_LPJ_G0027526.1 mouse_genomes_project 3 97973695 97977758 - MGP_LPJ_P0062351 Ciart protein_coding protein_coding MGP_LPJ_T0062352.1 MGP_LPJ_G0027526.1 mouse_genomes_project 3 97973697 97977784 - MGP_LPJ_P0062352 Ciart protein_coding protein_coding MGP_LPJ_T0062353.1 MGP_LPJ_G0027526.1 mouse_genomes_project 3 97973997 97977804 - MGP_LPJ_P0062353 Ciart protein_coding protein_coding MGP_LPJ_T0062354.1 MGP_LPJ_G0027526.1 mouse_genomes_project 3 97974814 97976696 - MGP_LPJ_P0062354 Ciart protein_coding protein_coding MGP_LPJ_T0062355.1 MGP_LPJ_G0027526.1 mouse_genomes_project 3 97975827 97977756 - MGP_LPJ_P0062355 Ciart protein_coding protein_coding MGP_LPJ_T0062356.1 MGP_LPJ_G0027526.1 mouse_genomes_project 3 97976048 97977627 - MGP_LPJ_P0062356 Ciart protein_coding protein_coding MGP_LPJ_T0059858.1 MGP_LPJ_G0026983.1 mouse_genomes_project 3 2510595 2723075 + MGP_LPJ_P0059858 Zfhx4 protein_coding protein_coding MGP_LPJ_T0059859.1 MGP_LPJ_G0026983.1 mouse_genomes_project 3 2510615 2635135 + Zfhx4 protein_coding retained_intron MGP_LPJ_T0059860.1 MGP_LPJ_G0026983.1 mouse_genomes_project 3 2510623 2725765 + MGP_LPJ_P0059860 Zfhx4 protein_coding protein_coding MGP_LPJ_T0059861.1 MGP_LPJ_G0026983.1 mouse_genomes_project 3 2513328 2533834 + MGP_LPJ_P0059861 Zfhx4 protein_coding protein_coding MGP_LPJ_T0059862.1 MGP_LPJ_G0026983.1 mouse_genomes_project 3 2533487 2725767 + MGP_LPJ_P0059862 Zfhx4 protein_coding protein_coding MGP_LPJ_T0014164.1 MGP_LPJ_G0012255.1 mouse_genomes_project 3 101915857 101916091 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060360.1 MGP_LPJ_G0027093.1 mouse_genomes_project 3 34606400 34634628 + MGP_LPJ_P0060360 Acad9 protein_coding protein_coding MGP_LPJ_T0060361.1 MGP_LPJ_G0027093.1 mouse_genomes_project 3 34606488 34616659 + MGP_LPJ_P0060361 Acad9 protein_coding protein_coding MGP_LPJ_T0060362.1 MGP_LPJ_G0027093.1 mouse_genomes_project 3 34606493 34633244 + Acad9 protein_coding retained_intron MGP_LPJ_T0060363.1 MGP_LPJ_G0027093.1 mouse_genomes_project 3 34617407 34621345 + Acad9 protein_coding retained_intron MGP_LPJ_T0060364.1 MGP_LPJ_G0027093.1 mouse_genomes_project 3 34619090 34631047 + MGP_LPJ_P0060364 Acad9 protein_coding nonsense_mediated_decay MGP_LPJ_T0060365.1 MGP_LPJ_G0027093.1 mouse_genomes_project 3 34620784 34630699 + Acad9 protein_coding retained_intron MGP_LPJ_T0060366.1 MGP_LPJ_G0027093.1 mouse_genomes_project 3 34620859 34633244 + Acad9 protein_coding retained_intron MGP_LPJ_T0060367.1 MGP_LPJ_G0027093.1 mouse_genomes_project 3 34631991 34633508 + Acad9 protein_coding retained_intron MGP_LPJ_T0013898.1 MGP_LPJ_G0011989.1 mouse_genomes_project 3 12545421 12545640 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017934.1 MGP_LPJ_G0015434.1 mouse_genomes_project 3 111343983 111350930 - Gm12522 processed_transcript processed_transcript MGP_LPJ_T0014047.1 MGP_LPJ_G0012138.1 mouse_genomes_project 3 66022267 66022517 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014297.1 MGP_LPJ_G0012388.1 mouse_genomes_project 3 140707003 140707162 + processed_pseudogene processed_pseudogene MGP_LPJ_T0064207.1 MGP_LPJ_G0027917.1 mouse_genomes_project 3 157502549 157564570 - MGP_LPJ_P0064207 Fam73a protein_coding protein_coding MGP_LPJ_T0064208.1 MGP_LPJ_G0027917.1 mouse_genomes_project 3 157504631 157564568 - MGP_LPJ_P0064208 Fam73a protein_coding protein_coding MGP_LPJ_T0064209.1 MGP_LPJ_G0027917.1 mouse_genomes_project 3 157510929 157564546 - MGP_LPJ_P0064209 Fam73a protein_coding protein_coding MGP_LPJ_T0064210.1 MGP_LPJ_G0027917.1 mouse_genomes_project 3 157511096 157516370 - Fam73a protein_coding retained_intron MGP_LPJ_T0064211.1 MGP_LPJ_G0027917.1 mouse_genomes_project 3 157522357 157549597 - MGP_LPJ_P0064211 Fam73a protein_coding protein_coding MGP_LPJ_T0064212.1 MGP_LPJ_G0027917.1 mouse_genomes_project 3 157522531 157529294 - Fam73a protein_coding retained_intron MGP_LPJ_T0064213.1 MGP_LPJ_G0027917.1 mouse_genomes_project 3 157528836 157561196 - MGP_LPJ_P0064213 Fam73a protein_coding nonsense_mediated_decay MGP_LPJ_T0064214.1 MGP_LPJ_G0027917.1 mouse_genomes_project 3 157560742 157564547 - Fam73a protein_coding retained_intron MGP_LPJ_T0099379.1 MGP_LPJ_G0037642.1 mouse_genomes_project 3 22459007 22459114 + Gm24704 snRNA snRNA MGP_LPJ_T0099380.1 MGP_LPJ_G0037643.1 mouse_genomes_project 3 31413441 31413598 + Gm23214 snRNA snRNA MGP_LPJ_T0102122.1 MGP_LPJ_G0040159.1 mouse_genomes_project 3 110894647 110898067 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0014201.1 MGP_LPJ_G0012292.1 mouse_genomes_project 3 111198160 111198689 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001413.1 MGP_LPJ_G0001332.1 mouse_genomes_project 3 158215948 158216933 + TEC TEC MGP_LPJ_T0014132.1 MGP_LPJ_G0012223.1 mouse_genomes_project 3 94341092 94341720 + processed_pseudogene processed_pseudogene MGP_LPJ_T0060187.1 MGP_LPJ_G0027063.1 mouse_genomes_project 3 28942993 28965438 + MGP_LPJ_P0060187 Samd7 protein_coding nonsense_mediated_decay MGP_LPJ_T0060188.1 MGP_LPJ_G0027063.1 mouse_genomes_project 3 28943040 28965446 + MGP_LPJ_P0060188 Samd7 protein_coding protein_coding MGP_LPJ_T0060189.1 MGP_LPJ_G0027063.1 mouse_genomes_project 3 28947745 28963767 + MGP_LPJ_P0060189 Samd7 protein_coding nonsense_mediated_decay MGP_LPJ_T0060190.1 MGP_LPJ_G0027063.1 mouse_genomes_project 3 28952875 28954116 + Samd7 protein_coding retained_intron MGP_LPJ_T0007644.1 MGP_LPJ_G0006252.1 mouse_genomes_project 3 98524132 98535945 + lincRNA lincRNA MGP_LPJ_T0059972.1 MGP_LPJ_G0027020.1 mouse_genomes_project 3 13309897 13358632 - MGP_LPJ_P0059972 protein_coding protein_coding MGP_LPJ_T0059973.1 MGP_LPJ_G0027020.1 mouse_genomes_project 3 13310338 13358584 - MGP_LPJ_P0059973 protein_coding protein_coding MGP_LPJ_T0059975.1 MGP_LPJ_G0027020.1 mouse_genomes_project 3 13312012 13358595 - protein_coding processed_transcript MGP_LPJ_T0099433.1 MGP_LPJ_G0037696.1 mouse_genomes_project 3 107279755 107279837 - Gm26091 snRNA snRNA MGP_LPJ_T0001271.1 MGP_LPJ_G0001191.1 mouse_genomes_project 3 68545728 68552646 + TEC TEC MGP_LPJ_T0004424.1 MGP_LPJ_G0003860.1 mouse_genomes_project 3 157318091 157319031 + Gm43455 antisense antisense MGP_LPJ_T0004425.1 MGP_LPJ_G0003860.1 mouse_genomes_project 3 157318305 157319031 + Gm43455 antisense antisense MGP_LPJ_T0014077.1 MGP_LPJ_G0012168.1 mouse_genomes_project 3 72198738 72198897 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007534.1 MGP_LPJ_G0006174.1 mouse_genomes_project 3 39294187 39317755 - 1700017G19Rik lincRNA lincRNA MGP_LPJ_T0007535.1 MGP_LPJ_G0006174.1 mouse_genomes_project 3 39297750 39299095 - 1700017G19Rik lincRNA lincRNA MGP_LPJ_T0001394.1 MGP_LPJ_G0001313.1 mouse_genomes_project 3 141086377 141087900 + TEC TEC MGP_LPJ_T0014254.1 MGP_LPJ_G0012345.1 mouse_genomes_project 3 128473044 128473690 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060212.1 MGP_LPJ_G0027067.1 mouse_genomes_project 3 29204556 29267341 + MGP_LPJ_P0060212 Prkci protein_coding protein_coding MGP_LPJ_T0060213.1 MGP_LPJ_G0027067.1 mouse_genomes_project 3 29214002 29243167 + MGP_LPJ_P0060213 Prkci protein_coding protein_coding MGP_LPJ_T0060214.1 MGP_LPJ_G0027067.1 mouse_genomes_project 3 29240375 29250619 + Prkci protein_coding processed_transcript MGP_LPJ_T0060215.1 MGP_LPJ_G0027067.1 mouse_genomes_project 3 29249671 29252446 + MGP_LPJ_P0060215 Prkci protein_coding protein_coding MGP_LPJ_T0060216.1 MGP_LPJ_G0027067.1 mouse_genomes_project 3 29249736 29251191 + Prkci protein_coding retained_intron MGP_LPJ_T0001414.1 MGP_LPJ_G0001333.1 mouse_genomes_project 3 158567533 158570851 - TEC TEC MGP_LPJ_T0099403.1 MGP_LPJ_G0037666.1 mouse_genomes_project 3 73091317 73091468 - Gm22451 snRNA snRNA MGP_LPJ_T0001424.1 MGP_LPJ_G0001343.1 mouse_genomes_project 3 162528072 162529637 + TEC TEC MGP_LPJ_T0061710.1 MGP_LPJ_G0027368.1 mouse_genomes_project 3 90627718 90639187 - MGP_LPJ_P0061710 Adam15 protein_coding nonsense_mediated_decay MGP_LPJ_T0061711.1 MGP_LPJ_G0027368.1 mouse_genomes_project 3 90628816 90639194 - MGP_LPJ_P0061711 Adam15 protein_coding protein_coding MGP_LPJ_T0061712.1 MGP_LPJ_G0027368.1 mouse_genomes_project 3 90628816 90639201 - MGP_LPJ_P0061712 Adam15 protein_coding protein_coding MGP_LPJ_T0061713.1 MGP_LPJ_G0027368.1 mouse_genomes_project 3 90628817 90630334 - Adam15 protein_coding processed_transcript MGP_LPJ_T0061714.1 MGP_LPJ_G0027368.1 mouse_genomes_project 3 90628820 90629617 - Adam15 protein_coding processed_transcript MGP_LPJ_T0061715.1 MGP_LPJ_G0027368.1 mouse_genomes_project 3 90628820 90639164 - MGP_LPJ_P0061715 Adam15 protein_coding protein_coding MGP_LPJ_T0061716.1 MGP_LPJ_G0027368.1 mouse_genomes_project 3 90628824 90639180 - MGP_LPJ_P0061716 Adam15 protein_coding protein_coding MGP_LPJ_T0061717.1 MGP_LPJ_G0027368.1 mouse_genomes_project 3 90628921 90629529 - Adam15 protein_coding retained_intron MGP_LPJ_T0061718.1 MGP_LPJ_G0027368.1 mouse_genomes_project 3 90629091 90630096 - Adam15 protein_coding retained_intron MGP_LPJ_T0061719.1 MGP_LPJ_G0027368.1 mouse_genomes_project 3 90629250 90632856 - Adam15 protein_coding retained_intron MGP_LPJ_T0061720.1 MGP_LPJ_G0027368.1 mouse_genomes_project 3 90631908 90639179 - Adam15 protein_coding retained_intron MGP_LPJ_T0061721.1 MGP_LPJ_G0027368.1 mouse_genomes_project 3 90635732 90639165 - Adam15 protein_coding retained_intron MGP_LPJ_T0061722.1 MGP_LPJ_G0027368.1 mouse_genomes_project 3 90637722 90638312 - Adam15 protein_coding processed_transcript MGP_LPJ_T0062060.1 MGP_LPJ_G0027479.1 mouse_genomes_project 3 96314015 96316275 - protein_coding retained_intron MGP_LPJ_T0062061.1 MGP_LPJ_G0027479.1 mouse_genomes_project 3 96314772 96319068 - MGP_LPJ_P0062061 protein_coding protein_coding MGP_LPJ_T0062062.1 MGP_LPJ_G0027479.1 mouse_genomes_project 3 96314993 96326122 - MGP_LPJ_P0062062 protein_coding protein_coding MGP_LPJ_T0062063.1 MGP_LPJ_G0027479.1 mouse_genomes_project 3 96314993 96326040 - MGP_LPJ_P0062063 protein_coding protein_coding MGP_LPJ_T0062064.1 MGP_LPJ_G0027479.1 mouse_genomes_project 3 96314993 96316724 - MGP_LPJ_P0062064 protein_coding protein_coding MGP_LPJ_T0062065.1 MGP_LPJ_G0027479.1 mouse_genomes_project 3 96314993 96319019 - MGP_LPJ_P0062065 protein_coding protein_coding MGP_LPJ_T0062066.1 MGP_LPJ_G0027479.1 mouse_genomes_project 3 96314993 96319089 - MGP_LPJ_P0062066 protein_coding protein_coding MGP_LPJ_T0062067.1 MGP_LPJ_G0027479.1 mouse_genomes_project 3 96316722 96319215 - protein_coding retained_intron MGP_LPJ_T0004310.1 MGP_LPJ_G0003787.1 mouse_genomes_project 3 96964378 96966965 - A730011C13Rik antisense antisense MGP_LPJ_T0004311.1 MGP_LPJ_G0003787.1 mouse_genomes_project 3 96965011 96967319 - A730011C13Rik antisense antisense MGP_LPJ_T0004387.1 MGP_LPJ_G0003834.1 mouse_genomes_project 3 131159016 131166133 + Gm16958 antisense antisense MGP_LPJ_T0004388.1 MGP_LPJ_G0003834.1 mouse_genomes_project 3 131159050 131165162 + Gm16958 antisense antisense MGP_LPJ_T0014153.1 MGP_LPJ_G0012244.1 mouse_genomes_project 3 98200900 98201209 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014123.1 MGP_LPJ_G0012214.1 mouse_genomes_project 3 92045235 92045388 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007490.1 MGP_LPJ_G0006137.1 mouse_genomes_project 3 18375967 18379074 - Gm31466 lincRNA lincRNA MGP_LPJ_T0001412.1 MGP_LPJ_G0001331.1 mouse_genomes_project 3 157619917 157622998 - TEC TEC MGP_LPJ_T0062878.1 MGP_LPJ_G0027652.1 mouse_genomes_project 3 108764986 108778675 + MGP_LPJ_P0062878 Ovgp1 protein_coding protein_coding MGP_LPJ_T0062879.1 MGP_LPJ_G0027652.1 mouse_genomes_project 3 108765358 108777367 + MGP_LPJ_P0062879 Ovgp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0062880.1 MGP_LPJ_G0027652.1 mouse_genomes_project 3 108768566 108771388 + Ovgp1 protein_coding retained_intron MGP_LPJ_T0062881.1 MGP_LPJ_G0027652.1 mouse_genomes_project 3 108771363 108776066 + Ovgp1 protein_coding processed_transcript MGP_LPJ_T0062287.1 MGP_LPJ_G0027517.1 mouse_genomes_project 3 97656869 97688160 + MGP_LPJ_P0062287 protein_coding protein_coding MGP_LPJ_T0062288.1 MGP_LPJ_G0027517.1 mouse_genomes_project 3 97656869 97688160 + MGP_LPJ_P0062288 protein_coding protein_coding MGP_LPJ_T0062289.1 MGP_LPJ_G0027517.1 mouse_genomes_project 3 97656869 97688155 + MGP_LPJ_P0062289 protein_coding protein_coding MGP_LPJ_T0062290.1 MGP_LPJ_G0027517.1 mouse_genomes_project 3 97656904 97686477 + MGP_LPJ_P0062290 protein_coding protein_coding MGP_LPJ_T0062291.1 MGP_LPJ_G0027517.1 mouse_genomes_project 3 97656904 97688154 + MGP_LPJ_P0062291 protein_coding protein_coding MGP_LPJ_T0062292.1 MGP_LPJ_G0027517.1 mouse_genomes_project 3 97656909 97688153 + MGP_LPJ_P0062292 protein_coding protein_coding MGP_LPJ_T0062293.1 MGP_LPJ_G0027517.1 mouse_genomes_project 3 97656916 97688154 + MGP_LPJ_P0062293 protein_coding nonsense_mediated_decay MGP_LPJ_T0062294.1 MGP_LPJ_G0027517.1 mouse_genomes_project 3 97656925 97686408 + MGP_LPJ_P0062294 protein_coding protein_coding MGP_LPJ_T0101546.1 MGP_LPJ_G0039655.1 mouse_genomes_project 3 96701278 96704769 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101547.1 MGP_LPJ_G0039655.1 mouse_genomes_project 3 96701329 96710346 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0014300.1 MGP_LPJ_G0012391.1 mouse_genomes_project 3 142337007 142337398 + processed_pseudogene processed_pseudogene MGP_LPJ_T0060070.1 MGP_LPJ_G0027042.1 mouse_genomes_project 3 21659459 22690262 - MGP_LPJ_P0060070 Naaladl2 protein_coding protein_coding MGP_LPJ_T0060071.1 MGP_LPJ_G0027042.1 mouse_genomes_project 3 21666137 21807987 - Naaladl2 protein_coding processed_transcript MGP_LPJ_T0060072.1 MGP_LPJ_G0027042.1 mouse_genomes_project 3 21666787 21842416 - Naaladl2 protein_coding processed_transcript MGP_LPJ_T0060073.1 MGP_LPJ_G0027042.1 mouse_genomes_project 3 22447515 23059078 - Naaladl2 protein_coding retained_intron MGP_LPJ_T0099393.1 MGP_LPJ_G0037656.1 mouse_genomes_project 3 57860887 57860994 - Gm26166 snRNA snRNA MGP_LPJ_T0061078.1 MGP_LPJ_G0027243.1 mouse_genomes_project 3 76034604 76128544 + MGP_LPJ_P0061078 Serpini1 protein_coding protein_coding MGP_LPJ_T0061079.1 MGP_LPJ_G0027243.1 mouse_genomes_project 3 76034604 76097263 + MGP_LPJ_P0061079 Serpini1 protein_coding protein_coding MGP_LPJ_T0061080.1 MGP_LPJ_G0027243.1 mouse_genomes_project 3 76034618 76091326 + Serpini1 protein_coding processed_transcript MGP_LPJ_T0061081.1 MGP_LPJ_G0027243.1 mouse_genomes_project 3 76034635 76096755 + Serpini1 protein_coding retained_intron MGP_LPJ_T0014083.1 MGP_LPJ_G0012174.1 mouse_genomes_project 3 74783233 74783699 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098579.1 MGP_LPJ_G0036853.1 mouse_genomes_project 3 107320635 107323496 + Gm43581 sense_intronic sense_intronic MGP_LPJ_T0062542.1 MGP_LPJ_G0027575.1 mouse_genomes_project 3 100411694 100413136 + MGP_LPJ_P0062542 Adam30 protein_coding protein_coding MGP_LPJ_T0062543.1 MGP_LPJ_G0027575.1 mouse_genomes_project 3 100411724 100415233 + MGP_LPJ_P0062543 Adam30 protein_coding protein_coding MGP_LPJ_T0014061.1 MGP_LPJ_G0012152.1 mouse_genomes_project 3 69498828 69499369 - processed_pseudogene processed_pseudogene MGP_LPJ_T0063181.1 MGP_LPJ_G0027727.1 mouse_genomes_project 3 116941298 116969040 - MGP_LPJ_P0063181 Rnpc3 protein_coding protein_coding MGP_LPJ_T0063182.1 MGP_LPJ_G0027727.1 mouse_genomes_project 3 116941786 116969040 - MGP_LPJ_P0063182 Rnpc3 protein_coding protein_coding MGP_LPJ_T0063183.1 MGP_LPJ_G0027727.1 mouse_genomes_project 3 116941845 116968924 - MGP_LPJ_P0063183 Rnpc3 protein_coding protein_coding MGP_LPJ_T0063184.1 MGP_LPJ_G0027727.1 mouse_genomes_project 3 116942658 116969040 - MGP_LPJ_P0063184 Rnpc3 protein_coding protein_coding MGP_LPJ_T0063185.1 MGP_LPJ_G0027727.1 mouse_genomes_project 3 116949392 116953526 - Rnpc3 protein_coding processed_transcript MGP_LPJ_T0063186.1 MGP_LPJ_G0027727.1 mouse_genomes_project 3 116954638 116959847 - Rnpc3 protein_coding processed_transcript MGP_LPJ_T0063187.1 MGP_LPJ_G0027727.1 mouse_genomes_project 3 116954887 116959198 - Rnpc3 protein_coding processed_transcript MGP_LPJ_T0063188.1 MGP_LPJ_G0027727.1 mouse_genomes_project 3 116965968 116968970 - Rnpc3 protein_coding retained_intron MGP_LPJ_T0004261.1 MGP_LPJ_G0003750.1 mouse_genomes_project 3 52776709 52781852 + Gm16206 antisense antisense MGP_LPJ_T0007514.1 MGP_LPJ_G0006159.1 mouse_genomes_project 3 33254797 33265681 + Gm38509 lincRNA lincRNA MGP_LPJ_T0062015.1 MGP_LPJ_G0027454.1 mouse_genomes_project 3 94532526 94533864 - MGP_LPJ_P0062015 Lce1l protein_coding protein_coding MGP_LPJ_T0063919.1 MGP_LPJ_G0027864.1 mouse_genomes_project 3 146440490 146485664 - MGP_LPJ_P0063919 Bmpr1b protein_coding protein_coding MGP_LPJ_T0063920.1 MGP_LPJ_G0027864.1 mouse_genomes_project 3 146443332 146534902 - MGP_LPJ_P0063920 Bmpr1b protein_coding nonsense_mediated_decay MGP_LPJ_T0061391.1 MGP_LPJ_G0027314.1 mouse_genomes_project 3 89127821 89133649 - Hapln2 protein_coding retained_intron MGP_LPJ_T0061392.1 MGP_LPJ_G0027314.1 mouse_genomes_project 3 89128132 89133544 - MGP_LPJ_P0061392 Hapln2 protein_coding protein_coding MGP_LPJ_T0061393.1 MGP_LPJ_G0027314.1 mouse_genomes_project 3 89128709 89129745 - Hapln2 protein_coding retained_intron MGP_LPJ_T0061394.1 MGP_LPJ_G0027314.1 mouse_genomes_project 3 89129605 89133558 - MGP_LPJ_P0061394 Hapln2 protein_coding nonsense_mediated_decay MGP_LPJ_T0062016.1 MGP_LPJ_G0027455.1 mouse_genomes_project 3 94551073 94552931 - MGP_LPJ_P0062016 2310050C09Rik protein_coding protein_coding MGP_LPJ_T0062123.1 MGP_LPJ_G0027490.1 mouse_genomes_project 3 96824886 96827755 - MGP_LPJ_P0062123 Psmb4 protein_coding protein_coding MGP_LPJ_T0062124.1 MGP_LPJ_G0027490.1 mouse_genomes_project 3 96825115 96825637 - Psmb4 protein_coding retained_intron MGP_LPJ_T0062125.1 MGP_LPJ_G0027490.1 mouse_genomes_project 3 96825691 96827656 - Psmb4 protein_coding retained_intron MGP_LPJ_T0062126.1 MGP_LPJ_G0027490.1 mouse_genomes_project 3 96825710 96827539 - Psmb4 protein_coding retained_intron MGP_LPJ_T0062127.1 MGP_LPJ_G0027490.1 mouse_genomes_project 3 96826100 96826749 - Psmb4 protein_coding retained_intron MGP_LPJ_T0062022.1 MGP_LPJ_G0027461.1 mouse_genomes_project 3 94700835 94702042 + MGP_LPJ_P0062022 Lce3e protein_coding protein_coding MGP_LPJ_T0013880.1 MGP_LPJ_G0011971.1 mouse_genomes_project 3 7841593 7852682 - processed_pseudogene processed_pseudogene MGP_LPJ_T0062568.1 MGP_LPJ_G0027586.1 mouse_genomes_project 3 101271324 101280519 - MGP_LPJ_P0062568 Hsd3b1 protein_coding protein_coding MGP_LPJ_T0062569.1 MGP_LPJ_G0027586.1 mouse_genomes_project 3 101271326 101280519 - MGP_LPJ_P0062569 Hsd3b1 protein_coding protein_coding MGP_LPJ_T0013851.1 MGP_LPJ_G0011942.1 mouse_genomes_project 3 1493967 1494397 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099449.1 MGP_LPJ_G0037712.1 mouse_genomes_project 3 142344992 142345091 - Gm25920 snRNA snRNA MGP_LPJ_T0062020.1 MGP_LPJ_G0027459.1 mouse_genomes_project 3 94658277 94659449 + MGP_LPJ_P0062020 Lce3f protein_coding protein_coding MGP_LPJ_T0063200.1 MGP_LPJ_G0027730.1 mouse_genomes_project 3 119113668 119118307 - MGP_LPJ_P0063200 S1pr1 protein_coding protein_coding MGP_LPJ_T0001398.1 MGP_LPJ_G0001317.1 mouse_genomes_project 3 146292798 146295410 + TEC TEC MGP_LPJ_T0014330.1 MGP_LPJ_G0012421.1 mouse_genomes_project 3 157160211 157160689 + processed_pseudogene processed_pseudogene MGP_LPJ_T0059882.1 MGP_LPJ_G0026990.1 mouse_genomes_project 3 6019199 6023097 - MGP_LPJ_P0059882 Hey1 protein_coding protein_coding MGP_LPJ_T0059883.1 MGP_LPJ_G0026990.1 mouse_genomes_project 3 6020539 6022825 - Hey1 protein_coding retained_intron MGP_LPJ_T0059884.1 MGP_LPJ_G0026990.1 mouse_genomes_project 3 6020636 6022466 - Hey1 protein_coding retained_intron MGP_LPJ_T0059885.1 MGP_LPJ_G0026990.1 mouse_genomes_project 3 6021382 6022805 - Hey1 protein_coding retained_intron MGP_LPJ_T0064292.1 MGP_LPJ_G0027929.1 mouse_genomes_project 3 159630527 159659309 - MGP_LPJ_P0064292 Lhx8 protein_coding protein_coding MGP_LPJ_T0064293.1 MGP_LPJ_G0027929.1 mouse_genomes_project 3 159630529 159658709 - MGP_LPJ_P0064293 Lhx8 protein_coding protein_coding MGP_LPJ_T0064294.1 MGP_LPJ_G0027929.1 mouse_genomes_project 3 159631211 159656816 - MGP_LPJ_P0064294 Lhx8 protein_coding nonsense_mediated_decay MGP_LPJ_T0064295.1 MGP_LPJ_G0027929.1 mouse_genomes_project 3 159645116 159653515 - Lhx8 protein_coding retained_intron MGP_LPJ_T0064296.1 MGP_LPJ_G0027929.1 mouse_genomes_project 3 159650888 159657284 - MGP_LPJ_P0064296 Lhx8 protein_coding protein_coding MGP_LPJ_T0013879.1 MGP_LPJ_G0011970.1 mouse_genomes_project 3 7806231 7806410 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099458.1 MGP_LPJ_G0037721.1 mouse_genomes_project 3 162836496 162836603 + Gm22458 snRNA snRNA MGP_LPJ_T0010562.1 MGP_LPJ_G0008680.1 mouse_genomes_project 3 111545252 111545326 - Gm22860 miRNA miRNA MGP_LPJ_T0060194.1 MGP_LPJ_G0027065.1 mouse_genomes_project 3 29059325 29083196 + Gpr160 protein_coding retained_intron MGP_LPJ_T0060195.1 MGP_LPJ_G0027065.1 mouse_genomes_project 3 29059325 29103589 + MGP_LPJ_P0060195 Gpr160 protein_coding protein_coding MGP_LPJ_T0060196.1 MGP_LPJ_G0027065.1 mouse_genomes_project 3 29059325 29103589 + MGP_LPJ_P0060196 Gpr160 protein_coding protein_coding MGP_LPJ_T0060197.1 MGP_LPJ_G0027065.1 mouse_genomes_project 3 29059325 29103591 + MGP_LPJ_P0060197 Gpr160 protein_coding protein_coding MGP_LPJ_T0060198.1 MGP_LPJ_G0027065.1 mouse_genomes_project 3 29059364 29103589 + MGP_LPJ_P0060198 Gpr160 protein_coding protein_coding MGP_LPJ_T0060199.1 MGP_LPJ_G0027065.1 mouse_genomes_project 3 29059368 29102191 + MGP_LPJ_P0060199 Gpr160 protein_coding protein_coding MGP_LPJ_T0060200.1 MGP_LPJ_G0027065.1 mouse_genomes_project 3 29059390 29103589 + MGP_LPJ_P0060200 Gpr160 protein_coding protein_coding MGP_LPJ_T0060201.1 MGP_LPJ_G0027065.1 mouse_genomes_project 3 29059518 29102220 + MGP_LPJ_P0060201 Gpr160 protein_coding protein_coding MGP_LPJ_T0101548.1 MGP_LPJ_G0039656.1 mouse_genomes_project 3 131518781 131520547 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0101545.1 MGP_LPJ_G0039654.1 mouse_genomes_project 3 64798411 64798644 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0060234.1 MGP_LPJ_G0027074.1 mouse_genomes_project 3 30808882 30839194 + MGP_LPJ_P0060234 Pik3ca protein_coding protein_coding MGP_LPJ_T0060235.1 MGP_LPJ_G0027074.1 mouse_genomes_project 3 30834754 30835906 + Pik3ca protein_coding retained_intron MGP_LPJ_T0004386.1 MGP_LPJ_G0003833.1 mouse_genomes_project 3 130384988 130391390 - Gm17225 antisense antisense MGP_LPJ_T0013961.1 MGP_LPJ_G0012052.1 mouse_genomes_project 3 36628140 36628616 - processed_pseudogene processed_pseudogene MGP_LPJ_T0061295.1 MGP_LPJ_G0027293.1 mouse_genomes_project 3 88014024 88016390 - MGP_LPJ_P0061295 protein_coding protein_coding MGP_LPJ_T0014306.1 MGP_LPJ_G0012397.1 mouse_genomes_project 3 143616218 143616656 - processed_pseudogene processed_pseudogene MGP_LPJ_T0062411.1 MGP_LPJ_G0027542.1 mouse_genomes_project 3 98407298 98407679 + MGP_LPJ_P0062411 Hist2h2bb protein_coding protein_coding MGP_LPJ_T0007583.1 MGP_LPJ_G0006209.1 mouse_genomes_project 3 68900940 68908329 + lincRNA lincRNA MGP_LPJ_T0061704.1 MGP_LPJ_G0027365.1 mouse_genomes_project 3 90556480 90565225 - MGP_LPJ_P0061704 Efna1 protein_coding protein_coding MGP_LPJ_T0061705.1 MGP_LPJ_G0027365.1 mouse_genomes_project 3 90557232 90565126 - MGP_LPJ_P0061705 Efna1 protein_coding protein_coding MGP_LPJ_T0063893.1 MGP_LPJ_G0027859.1 mouse_genomes_project 3 143208103 143377619 + MGP_LPJ_P0063893 Tspan5 protein_coding protein_coding MGP_LPJ_T0063894.1 MGP_LPJ_G0027859.1 mouse_genomes_project 3 143208213 143374364 + MGP_LPJ_P0063894 Tspan5 protein_coding nonsense_mediated_decay MGP_LPJ_T0063895.1 MGP_LPJ_G0027859.1 mouse_genomes_project 3 143208413 143366833 + MGP_LPJ_P0063895 Tspan5 protein_coding nonsense_mediated_decay MGP_LPJ_T0063896.1 MGP_LPJ_G0027859.1 mouse_genomes_project 3 143208677 143364465 + MGP_LPJ_P0063896 Tspan5 protein_coding protein_coding MGP_LPJ_T0063897.1 MGP_LPJ_G0027859.1 mouse_genomes_project 3 143244610 143372433 + MGP_LPJ_P0063897 Tspan5 protein_coding nonsense_mediated_decay MGP_LPJ_T0063898.1 MGP_LPJ_G0027859.1 mouse_genomes_project 3 143309515 143374355 + MGP_LPJ_P0063898 Tspan5 protein_coding protein_coding MGP_LPJ_T0014205.1 MGP_LPJ_G0012296.1 mouse_genomes_project 3 112973242 112973726 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062237.1 MGP_LPJ_G0027508.1 mouse_genomes_project 3 97268506 97301682 - MGP_LPJ_P0062237 Prune protein_coding protein_coding MGP_LPJ_T0062238.1 MGP_LPJ_G0027508.1 mouse_genomes_project 3 97281816 97285606 - Prune protein_coding retained_intron MGP_LPJ_T0013945.1 MGP_LPJ_G0012036.1 mouse_genomes_project 3 32614847 32615742 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001210.1 MGP_LPJ_G0001132.1 mouse_genomes_project 3 49797921 49799253 - TEC TEC MGP_LPJ_T0061355.1 MGP_LPJ_G0027306.1 mouse_genomes_project 3 88946453 88973254 - MGP_LPJ_P0061355 Prcc protein_coding protein_coding MGP_LPJ_T0007673.1 MGP_LPJ_G0006277.1 mouse_genomes_project 3 109980328 109987818 + A930002I21Rik lincRNA lincRNA MGP_LPJ_T0007674.1 MGP_LPJ_G0006277.1 mouse_genomes_project 3 109980330 109986637 + A930002I21Rik lincRNA lincRNA MGP_LPJ_T0062071.1 MGP_LPJ_G0027481.1 mouse_genomes_project 3 96347131 96358684 - MGP_LPJ_P0062071 Riiad1 protein_coding protein_coding MGP_LPJ_T0062072.1 MGP_LPJ_G0027481.1 mouse_genomes_project 3 96347133 96367208 - Riiad1 protein_coding processed_transcript MGP_LPJ_T0062073.1 MGP_LPJ_G0027481.1 mouse_genomes_project 3 96351013 96358015 - Riiad1 protein_coding processed_transcript MGP_LPJ_T0014167.1 MGP_LPJ_G0012258.1 mouse_genomes_project 3 102466273 102466588 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004332.1 MGP_LPJ_G0003801.1 mouse_genomes_project 3 99950160 99955988 + Gm43076 antisense antisense MGP_LPJ_T0004333.1 MGP_LPJ_G0003801.1 mouse_genomes_project 3 99950350 99952887 + Gm43076 antisense antisense MGP_LPJ_T0007567.1 MGP_LPJ_G0006198.1 mouse_genomes_project 3 57151916 57167852 - Gm26671 lincRNA lincRNA MGP_LPJ_T0007568.1 MGP_LPJ_G0006198.1 mouse_genomes_project 3 57163003 57167913 - Gm26671 lincRNA lincRNA MGP_LPJ_T0007569.1 MGP_LPJ_G0006198.1 mouse_genomes_project 3 57163357 57167883 - Gm26671 lincRNA lincRNA MGP_LPJ_T0007570.1 MGP_LPJ_G0006198.1 mouse_genomes_project 3 57164922 57167919 - Gm26671 lincRNA lincRNA MGP_LPJ_T0014258.1 MGP_LPJ_G0012349.1 mouse_genomes_project 3 131551519 131551865 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001302.1 MGP_LPJ_G0001222.1 mouse_genomes_project 3 98964872 98965396 + TEC TEC MGP_LPJ_T0063399.1 MGP_LPJ_G0027767.1 mouse_genomes_project 3 126329414 126354532 - MGP_LPJ_P0063399 Fnbp1l protein_coding protein_coding MGP_LPJ_T0063400.1 MGP_LPJ_G0027767.1 mouse_genomes_project 3 126329420 126411187 - MGP_LPJ_P0063400 Fnbp1l protein_coding protein_coding MGP_LPJ_T0063401.1 MGP_LPJ_G0027767.1 mouse_genomes_project 3 126332812 126411025 - MGP_LPJ_P0063401 Fnbp1l protein_coding protein_coding MGP_LPJ_T0063402.1 MGP_LPJ_G0027767.1 mouse_genomes_project 3 126338777 126345821 - Fnbp1l protein_coding retained_intron MGP_LPJ_T0063403.1 MGP_LPJ_G0027767.1 mouse_genomes_project 3 126348559 126349895 - Fnbp1l protein_coding retained_intron MGP_LPJ_T0100708.1 MGP_LPJ_G0038971.1 mouse_genomes_project 3 123293277 123293408 - Gm23432 snoRNA snoRNA MGP_LPJ_T0001220.1 MGP_LPJ_G0001142.1 mouse_genomes_project 3 50713002 50715522 - TEC TEC MGP_LPJ_T0102103.1 MGP_LPJ_G0040140.1 mouse_genomes_project 3 91847098 91849160 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0098554.1 MGP_LPJ_G0036828.1 mouse_genomes_project 3 104118745 104119497 - Gm42937 sense_intronic sense_intronic MGP_LPJ_T0001311.1 MGP_LPJ_G0001231.1 mouse_genomes_project 3 109319054 109321640 + TEC TEC MGP_LPJ_T0061240.1 MGP_LPJ_G0027279.1 mouse_genomes_project 3 85391027 85483048 - MGP_LPJ_P0061240 protein_coding protein_coding MGP_LPJ_T0061242.1 MGP_LPJ_G0027279.1 mouse_genomes_project 3 85392138 85482999 - MGP_LPJ_P0061242 protein_coding protein_coding MGP_LPJ_T0061243.1 MGP_LPJ_G0027279.1 mouse_genomes_project 3 85392670 85483139 - MGP_LPJ_P0061243 protein_coding protein_coding MGP_LPJ_T0010556.1 MGP_LPJ_G0008674.1 mouse_genomes_project 3 96974233 96974305 + Mir7013 miRNA miRNA MGP_LPJ_T0098376.1 MGP_LPJ_G0036657.1 mouse_genomes_project 3 13884247 13884576 - Gm25863 ribozyme ribozyme MGP_LPJ_T0011543.1 MGP_LPJ_G0009661.1 mouse_genomes_project 3 6821427 6821738 + Gm22604 misc_RNA misc_RNA MGP_LPJ_T0001232.1 MGP_LPJ_G0001153.1 mouse_genomes_project 3 51162695 51164521 - TEC TEC MGP_LPJ_T0001233.1 MGP_LPJ_G0001153.1 mouse_genomes_project 3 51162696 51164521 - TEC pseudogene MGP_LPJ_T0101541.1 MGP_LPJ_G0039652.1 mouse_genomes_project 3 59455112 59511900 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101542.1 MGP_LPJ_G0039652.1 mouse_genomes_project 3 59494767 59518994 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0004288.1 MGP_LPJ_G0003770.1 mouse_genomes_project 3 86251225 86264111 + 1700036G14Rik antisense antisense MGP_LPJ_T0062613.1 MGP_LPJ_G0027598.1 mouse_genomes_project 3 103497106 103534010 - MGP_LPJ_P0062613 Cd101 protein_coding protein_coding MGP_LPJ_T0062614.1 MGP_LPJ_G0027598.1 mouse_genomes_project 3 103497109 103526636 - MGP_LPJ_P0062614 Cd101 protein_coding protein_coding MGP_LPJ_T0061214.1 MGP_LPJ_G0027275.1 mouse_genomes_project 3 84963158 85029148 - MGP_LPJ_P0061214 Mnd1 protein_coding protein_coding MGP_LPJ_T0061786.1 MGP_LPJ_G0027385.1 mouse_genomes_project 3 91266226 91290084 - MGP_LPJ_P0061786 Atp8b2 protein_coding protein_coding MGP_LPJ_T0061787.1 MGP_LPJ_G0027385.1 mouse_genomes_project 3 91266226 91287205 - MGP_LPJ_P0061787 Atp8b2 protein_coding protein_coding MGP_LPJ_T0061788.1 MGP_LPJ_G0027385.1 mouse_genomes_project 3 91266234 91280094 - Atp8b2 protein_coding retained_intron MGP_LPJ_T0061789.1 MGP_LPJ_G0027385.1 mouse_genomes_project 3 91266901 91289855 - Atp8b2 protein_coding retained_intron MGP_LPJ_T0061790.1 MGP_LPJ_G0027385.1 mouse_genomes_project 3 91267594 91290084 - MGP_LPJ_P0061790 Atp8b2 protein_coding protein_coding MGP_LPJ_T0061791.1 MGP_LPJ_G0027385.1 mouse_genomes_project 3 91267942 91270503 - MGP_LPJ_P0061791 Atp8b2 protein_coding protein_coding MGP_LPJ_T0061792.1 MGP_LPJ_G0027385.1 mouse_genomes_project 3 91270459 91272492 - Atp8b2 protein_coding retained_intron MGP_LPJ_T0061793.1 MGP_LPJ_G0027385.1 mouse_genomes_project 3 91271933 91273201 - MGP_LPJ_P0061793 Atp8b2 protein_coding protein_coding MGP_LPJ_T0061794.1 MGP_LPJ_G0027385.1 mouse_genomes_project 3 91272768 91273284 - Atp8b2 protein_coding retained_intron MGP_LPJ_T0061795.1 MGP_LPJ_G0027385.1 mouse_genomes_project 3 91273164 91274080 - Atp8b2 protein_coding retained_intron MGP_LPJ_T0061796.1 MGP_LPJ_G0027385.1 mouse_genomes_project 3 91273191 91275131 - MGP_LPJ_P0061796 Atp8b2 protein_coding nonsense_mediated_decay MGP_LPJ_T0061797.1 MGP_LPJ_G0027385.1 mouse_genomes_project 3 91273255 91275261 - Atp8b2 protein_coding retained_intron MGP_LPJ_T0061798.1 MGP_LPJ_G0027385.1 mouse_genomes_project 3 91275273 91277182 - Atp8b2 protein_coding retained_intron MGP_LPJ_T0061799.1 MGP_LPJ_G0027385.1 mouse_genomes_project 3 91280567 91281368 - Atp8b2 protein_coding retained_intron MGP_LPJ_T0061800.1 MGP_LPJ_G0027385.1 mouse_genomes_project 3 91280998 91286130 - MGP_LPJ_P0061800 Atp8b2 protein_coding protein_coding MGP_LPJ_T0061801.1 MGP_LPJ_G0027385.1 mouse_genomes_project 3 91284582 91289690 - MGP_LPJ_P0061801 Atp8b2 protein_coding protein_coding MGP_LPJ_T0061802.1 MGP_LPJ_G0027385.1 mouse_genomes_project 3 91285129 91288391 - MGP_LPJ_P0061802 Atp8b2 protein_coding protein_coding MGP_LPJ_T0007580.1 MGP_LPJ_G0006206.1 mouse_genomes_project 3 67634809 67636896 - Gm35299 lincRNA lincRNA MGP_LPJ_T0010533.1 MGP_LPJ_G0008651.1 mouse_genomes_project 3 45895013 45895128 - Mir6379 miRNA miRNA MGP_LPJ_T0102109.1 MGP_LPJ_G0040146.1 mouse_genomes_project 3 96156108 96156301 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0061445.1 MGP_LPJ_G0027326.1 mouse_genomes_project 3 89482733 89511917 + MGP_LPJ_P0061445 Smg5 protein_coding protein_coding MGP_LPJ_T0061446.1 MGP_LPJ_G0027326.1 mouse_genomes_project 3 89482784 89500851 + Smg5 protein_coding retained_intron MGP_LPJ_T0061447.1 MGP_LPJ_G0027326.1 mouse_genomes_project 3 89482838 89489747 + Smg5 protein_coding retained_intron MGP_LPJ_T0061448.1 MGP_LPJ_G0027326.1 mouse_genomes_project 3 89487150 89495717 + Smg5 protein_coding processed_transcript MGP_LPJ_T0061449.1 MGP_LPJ_G0027326.1 mouse_genomes_project 3 89488871 89498853 + MGP_LPJ_P0061449 Smg5 protein_coding nonsense_mediated_decay MGP_LPJ_T0061450.1 MGP_LPJ_G0027326.1 mouse_genomes_project 3 89500612 89502759 + Smg5 protein_coding retained_intron MGP_LPJ_T0061451.1 MGP_LPJ_G0027326.1 mouse_genomes_project 3 89507772 89509216 + Smg5 protein_coding retained_intron MGP_LPJ_T0061452.1 MGP_LPJ_G0027326.1 mouse_genomes_project 3 89507925 89510849 + Smg5 protein_coding processed_transcript MGP_LPJ_T0061453.1 MGP_LPJ_G0027326.1 mouse_genomes_project 3 89510114 89510670 + Smg5 protein_coding retained_intron MGP_LPJ_T0060777.1 MGP_LPJ_G0027168.1 mouse_genomes_project 3 57187057 57195244 - MGP_LPJ_P0060777 Commd2 protein_coding protein_coding MGP_LPJ_T0060778.1 MGP_LPJ_G0027168.1 mouse_genomes_project 3 57189887 57195237 - MGP_LPJ_P0060778 Commd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0060779.1 MGP_LPJ_G0027168.1 mouse_genomes_project 3 57194630 57195244 - Commd2 protein_coding retained_intron MGP_LPJ_T0001263.1 MGP_LPJ_G0001183.1 mouse_genomes_project 3 60372728 60376093 + TEC TEC MGP_LPJ_T0014079.1 MGP_LPJ_G0012170.1 mouse_genomes_project 3 72491786 72492005 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004391.1 MGP_LPJ_G0003837.1 mouse_genomes_project 3 133703904 133708568 - Gm35986 antisense antisense MGP_LPJ_T0004392.1 MGP_LPJ_G0003837.1 mouse_genomes_project 3 133704069 133708847 - Gm35986 antisense antisense MGP_LPJ_T0100722.1 MGP_LPJ_G0038985.1 mouse_genomes_project 3 159118825 159118948 + Gm25757 snoRNA snoRNA MGP_LPJ_T0013984.1 MGP_LPJ_G0012075.1 mouse_genomes_project 3 46090343 46091346 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100694.1 MGP_LPJ_G0038957.1 mouse_genomes_project 3 98294383 98294510 + Gm22027 snoRNA snoRNA MGP_LPJ_T0004297.1 MGP_LPJ_G0003777.1 mouse_genomes_project 3 90602245 90605697 + Gm15998 antisense antisense MGP_LPJ_T0060313.1 MGP_LPJ_G0027086.1 mouse_genomes_project 3 32441564 32495835 + MGP_LPJ_P0060313 Fxr1 protein_coding protein_coding MGP_LPJ_T0060314.1 MGP_LPJ_G0027086.1 mouse_genomes_project 3 32441715 32495864 + MGP_LPJ_P0060314 Fxr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0060315.1 MGP_LPJ_G0027086.1 mouse_genomes_project 3 32441722 32495838 + MGP_LPJ_P0060315 Fxr1 protein_coding protein_coding MGP_LPJ_T0060316.1 MGP_LPJ_G0027086.1 mouse_genomes_project 3 32441725 32496814 + MGP_LPJ_P0060316 Fxr1 protein_coding protein_coding MGP_LPJ_T0060317.1 MGP_LPJ_G0027086.1 mouse_genomes_project 3 32441725 32495838 + MGP_LPJ_P0060317 Fxr1 protein_coding protein_coding MGP_LPJ_T0060318.1 MGP_LPJ_G0027086.1 mouse_genomes_project 3 32441730 32490821 + MGP_LPJ_P0060318 Fxr1 protein_coding protein_coding MGP_LPJ_T0060319.1 MGP_LPJ_G0027086.1 mouse_genomes_project 3 32465436 32467570 + Fxr1 protein_coding retained_intron MGP_LPJ_T0060320.1 MGP_LPJ_G0027086.1 mouse_genomes_project 3 32465439 32472446 + MGP_LPJ_P0060320 Fxr1 protein_coding protein_coding MGP_LPJ_T0060321.1 MGP_LPJ_G0027086.1 mouse_genomes_project 3 32472540 32475029 + Fxr1 protein_coding retained_intron MGP_LPJ_T0001199.1 MGP_LPJ_G0001121.1 mouse_genomes_project 3 40949018 40957970 + TEC TEC MGP_LPJ_T0060882.1 MGP_LPJ_G0027194.1 mouse_genomes_project 3 61170426 61174128 - MGP_LPJ_P0060882 B430305J03Rik protein_coding protein_coding MGP_LPJ_T0098552.1 MGP_LPJ_G0036826.1 mouse_genomes_project 3 103934360 103936562 + Gm42939 sense_intronic sense_intronic MGP_LPJ_T0064173.1 MGP_LPJ_G0027915.1 mouse_genomes_project 3 157438802 157465087 + MGP_LPJ_P0064173 Fubp1 protein_coding protein_coding MGP_LPJ_T0064174.1 MGP_LPJ_G0027915.1 mouse_genomes_project 3 157438853 157448717 + MGP_LPJ_P0064174 Fubp1 protein_coding protein_coding MGP_LPJ_T0064175.1 MGP_LPJ_G0027915.1 mouse_genomes_project 3 157438862 157461009 + MGP_LPJ_P0064175 Fubp1 protein_coding protein_coding MGP_LPJ_T0064176.1 MGP_LPJ_G0027915.1 mouse_genomes_project 3 157438872 157453116 + MGP_LPJ_P0064176 Fubp1 protein_coding protein_coding MGP_LPJ_T0064177.1 MGP_LPJ_G0027915.1 mouse_genomes_project 3 157438878 157461008 + MGP_LPJ_P0064177 Fubp1 protein_coding protein_coding MGP_LPJ_T0064178.1 MGP_LPJ_G0027915.1 mouse_genomes_project 3 157438894 157447933 + MGP_LPJ_P0064178 Fubp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0064179.1 MGP_LPJ_G0027915.1 mouse_genomes_project 3 157438899 157461008 + MGP_LPJ_P0064179 Fubp1 protein_coding protein_coding MGP_LPJ_T0064180.1 MGP_LPJ_G0027915.1 mouse_genomes_project 3 157438899 157464012 + MGP_LPJ_P0064180 Fubp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0064181.1 MGP_LPJ_G0027915.1 mouse_genomes_project 3 157438901 157465087 + MGP_LPJ_P0064181 Fubp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0064182.1 MGP_LPJ_G0027915.1 mouse_genomes_project 3 157445636 157446716 + Fubp1 protein_coding retained_intron MGP_LPJ_T0064183.1 MGP_LPJ_G0027915.1 mouse_genomes_project 3 157449580 157452353 + MGP_LPJ_P0064183 Fubp1 protein_coding protein_coding MGP_LPJ_T0064184.1 MGP_LPJ_G0027915.1 mouse_genomes_project 3 157450102 157451199 + Fubp1 protein_coding retained_intron MGP_LPJ_T0064185.1 MGP_LPJ_G0027915.1 mouse_genomes_project 3 157451516 157461009 + MGP_LPJ_P0064185 Fubp1 protein_coding protein_coding MGP_LPJ_T0064186.1 MGP_LPJ_G0027915.1 mouse_genomes_project 3 157451529 157461026 + MGP_LPJ_P0064186 Fubp1 protein_coding protein_coding MGP_LPJ_T0064187.1 MGP_LPJ_G0027915.1 mouse_genomes_project 3 157451539 157464092 + MGP_LPJ_P0064187 Fubp1 protein_coding protein_coding MGP_LPJ_T0064188.1 MGP_LPJ_G0027915.1 mouse_genomes_project 3 157452977 157463656 + Fubp1 protein_coding retained_intron MGP_LPJ_T0064189.1 MGP_LPJ_G0027915.1 mouse_genomes_project 3 157454122 157456481 + Fubp1 protein_coding retained_intron MGP_LPJ_T0064190.1 MGP_LPJ_G0027915.1 mouse_genomes_project 3 157455616 157459537 + Fubp1 protein_coding retained_intron MGP_LPJ_T0064191.1 MGP_LPJ_G0027915.1 mouse_genomes_project 3 157456074 157460745 + Fubp1 protein_coding retained_intron MGP_LPJ_T0007538.1 MGP_LPJ_G0006177.1 mouse_genomes_project 3 40099226 40114290 + Gm30852 lincRNA lincRNA MGP_LPJ_T0007539.1 MGP_LPJ_G0006177.1 mouse_genomes_project 3 40112774 40139693 + Gm30852 lincRNA lincRNA MGP_LPJ_T0001166.1 MGP_LPJ_G0001088.1 mouse_genomes_project 3 29164556 29164866 - TEC TEC MGP_LPJ_T0014232.1 MGP_LPJ_G0012323.1 mouse_genomes_project 3 120673447 120674090 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100691.1 MGP_LPJ_G0038954.1 mouse_genomes_project 3 91344069 91344205 - Gm24608 snoRNA snoRNA MGP_LPJ_T0100667.1 MGP_LPJ_G0038930.1 mouse_genomes_project 3 48693525 48693653 + Gm22480 snoRNA snoRNA MGP_LPJ_T0001170.1 MGP_LPJ_G0001092.1 mouse_genomes_project 3 31111929 31112242 - TEC TEC MGP_LPJ_T0064154.1 MGP_LPJ_G0027912.1 mouse_genomes_project 3 156993615 157041204 - MGP_LPJ_P0064154 Ptgfr protein_coding protein_coding MGP_LPJ_T0064155.1 MGP_LPJ_G0027912.1 mouse_genomes_project 3 156998400 157039573 - MGP_LPJ_P0064155 Ptgfr protein_coding protein_coding MGP_LPJ_T0064156.1 MGP_LPJ_G0027912.1 mouse_genomes_project 3 156998772 157037699 - Ptgfr protein_coding processed_transcript MGP_LPJ_T0062674.1 MGP_LPJ_G0027613.1 mouse_genomes_project 3 105568854 105581533 + MGP_LPJ_P0062674 Sike1 protein_coding protein_coding MGP_LPJ_T0062675.1 MGP_LPJ_G0027613.1 mouse_genomes_project 3 105568876 105572357 + Sike1 protein_coding retained_intron MGP_LPJ_T0062676.1 MGP_LPJ_G0027613.1 mouse_genomes_project 3 105568941 105575270 + MGP_LPJ_P0062676 Sike1 protein_coding protein_coding MGP_LPJ_T0062677.1 MGP_LPJ_G0027613.1 mouse_genomes_project 3 105569151 105570457 + Sike1 protein_coding retained_intron MGP_LPJ_T0062678.1 MGP_LPJ_G0027613.1 mouse_genomes_project 3 105569278 105574912 + MGP_LPJ_P0062678 Sike1 protein_coding nonsense_mediated_decay MGP_LPJ_T0062679.1 MGP_LPJ_G0027613.1 mouse_genomes_project 3 105569834 105572344 + Sike1 protein_coding retained_intron MGP_LPJ_T0007585.1 MGP_LPJ_G0006211.1 mouse_genomes_project 3 71034630 71073296 - Gm6634 lincRNA lincRNA MGP_LPJ_T0099428.1 MGP_LPJ_G0037691.1 mouse_genomes_project 3 98581243 98581408 + Gm24136 snRNA snRNA MGP_LPJ_T0013922.1 MGP_LPJ_G0012013.1 mouse_genomes_project 3 19881617 19882050 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062435.1 MGP_LPJ_G0027552.1 mouse_genomes_project 3 98807098 98817088 + Pex11b protein_coding processed_transcript MGP_LPJ_T0062436.1 MGP_LPJ_G0027552.1 mouse_genomes_project 3 98807152 98817088 + MGP_LPJ_P0062436 Pex11b protein_coding protein_coding MGP_LPJ_T0062438.1 MGP_LPJ_G0027552.1 mouse_genomes_project 3 98807222 98815755 + MGP_LPJ_P0062438 Pex11b protein_coding nonsense_mediated_decay MGP_LPJ_T0062439.1 MGP_LPJ_G0027552.1 mouse_genomes_project 3 98807375 98808676 + Pex11b protein_coding retained_intron MGP_LPJ_T0062440.1 MGP_LPJ_G0027552.1 mouse_genomes_project 3 98807394 98816448 + MGP_LPJ_P0062440 Pex11b protein_coding protein_coding MGP_LPJ_T0062441.1 MGP_LPJ_G0027552.1 mouse_genomes_project 3 98807555 98816448 + MGP_LPJ_P0062441 Pex11b protein_coding protein_coding MGP_LPJ_T0062442.1 MGP_LPJ_G0027552.1 mouse_genomes_project 3 98808775 98815522 + Pex11b protein_coding retained_intron MGP_LPJ_T0014075.1 MGP_LPJ_G0012166.1 mouse_genomes_project 3 71951562 71956165 + processed_pseudogene processed_pseudogene MGP_LPJ_T0063867.1 MGP_LPJ_G0027854.1 mouse_genomes_project 3 142752395 142767954 + MGP_LPJ_P0063867 Adh6a protein_coding protein_coding MGP_LPJ_T0063868.1 MGP_LPJ_G0027854.1 mouse_genomes_project 3 142752395 142768550 + MGP_LPJ_P0063868 Adh6a protein_coding protein_coding MGP_LPJ_T0004274.1 MGP_LPJ_G0003760.1 mouse_genomes_project 3 65157821 65331104 - antisense antisense MGP_LPJ_T0004275.1 MGP_LPJ_G0003760.1 mouse_genomes_project 3 65322636 65331076 - antisense antisense MGP_LPJ_T0004303.1 MGP_LPJ_G0003780.1 mouse_genomes_project 3 91235416 91236554 + Gm42809 antisense antisense MGP_LPJ_T0013950.1 MGP_LPJ_G0012041.1 mouse_genomes_project 3 34769580 34770536 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004421.1 MGP_LPJ_G0003858.1 mouse_genomes_project 3 151554200 151563986 + Gm16325 antisense antisense MGP_LPJ_T0004422.1 MGP_LPJ_G0003858.1 mouse_genomes_project 3 151560879 151561783 + Gm16325 antisense antisense MGP_LPJ_T0001391.1 MGP_LPJ_G0001310.1 mouse_genomes_project 3 139987976 139991878 - TEC TEC MGP_LPJ_T0098576.1 MGP_LPJ_G0036850.1 mouse_genomes_project 3 107135525 107141583 - Gm43696 sense_intronic sense_intronic MGP_LPJ_T0010582.1 MGP_LPJ_G0008700.1 mouse_genomes_project 3 144575400 144575522 + Mir7j miRNA miRNA MGP_LPJ_T0001155.1 MGP_LPJ_G0001077.1 mouse_genomes_project 3 25554253 25555482 + TEC TEC MGP_LPJ_T0060857.1 MGP_LPJ_G0027191.1 mouse_genomes_project 3 60228235 60364105 + MGP_LPJ_P0060857 Mbnl1 protein_coding protein_coding MGP_LPJ_T0060858.1 MGP_LPJ_G0027191.1 mouse_genomes_project 3 60228447 60372243 + MGP_LPJ_P0060858 Mbnl1 protein_coding protein_coding MGP_LPJ_T0060859.1 MGP_LPJ_G0027191.1 mouse_genomes_project 3 60228473 60231006 + Mbnl1 protein_coding retained_intron MGP_LPJ_T0060860.1 MGP_LPJ_G0027191.1 mouse_genomes_project 3 60228479 60391200 + MGP_LPJ_P0060860 Mbnl1 protein_coding protein_coding MGP_LPJ_T0060861.1 MGP_LPJ_G0027191.1 mouse_genomes_project 3 60228482 60364090 + MGP_LPJ_P0060861 Mbnl1 protein_coding protein_coding MGP_LPJ_T0060862.1 MGP_LPJ_G0027191.1 mouse_genomes_project 3 60252231 60315488 + Mbnl1 protein_coding processed_transcript MGP_LPJ_T0060863.1 MGP_LPJ_G0027191.1 mouse_genomes_project 3 60252516 60366442 + Mbnl1 protein_coding retained_intron MGP_LPJ_T0060864.1 MGP_LPJ_G0027191.1 mouse_genomes_project 3 60252533 60397906 + Mbnl1 protein_coding processed_transcript MGP_LPJ_T0060865.1 MGP_LPJ_G0027191.1 mouse_genomes_project 3 60252561 60315466 + Mbnl1 protein_coding processed_transcript MGP_LPJ_T0060866.1 MGP_LPJ_G0027191.1 mouse_genomes_project 3 60252561 60288140 + Mbnl1 protein_coding retained_intron MGP_LPJ_T0060867.1 MGP_LPJ_G0027191.1 mouse_genomes_project 3 60252574 60399686 + MGP_LPJ_P0060867 Mbnl1 protein_coding protein_coding MGP_LPJ_T0060868.1 MGP_LPJ_G0027191.1 mouse_genomes_project 3 60283536 60285613 + Mbnl1 protein_coding processed_transcript MGP_LPJ_T0060869.1 MGP_LPJ_G0027191.1 mouse_genomes_project 3 60285552 60399135 + MGP_LPJ_P0060869 Mbnl1 protein_coding protein_coding MGP_LPJ_T0060870.1 MGP_LPJ_G0027191.1 mouse_genomes_project 3 60285552 60399701 + MGP_LPJ_P0060870 Mbnl1 protein_coding protein_coding MGP_LPJ_T0060871.1 MGP_LPJ_G0027191.1 mouse_genomes_project 3 60286086 60388789 + Mbnl1 protein_coding retained_intron MGP_LPJ_T0060872.1 MGP_LPJ_G0027191.1 mouse_genomes_project 3 60286156 60395510 + Mbnl1 protein_coding processed_transcript MGP_LPJ_T0060873.1 MGP_LPJ_G0027191.1 mouse_genomes_project 3 60286156 60399686 + MGP_LPJ_P0060873 Mbnl1 protein_coding protein_coding MGP_LPJ_T0060874.1 MGP_LPJ_G0027191.1 mouse_genomes_project 3 60363981 60382702 + MGP_LPJ_P0060874 Mbnl1 protein_coding protein_coding MGP_LPJ_T0060875.1 MGP_LPJ_G0027191.1 mouse_genomes_project 3 60364051 60397171 + MGP_LPJ_P0060875 Mbnl1 protein_coding protein_coding MGP_LPJ_T0060876.1 MGP_LPJ_G0027191.1 mouse_genomes_project 3 60371886 60385073 + Mbnl1 protein_coding retained_intron MGP_LPJ_T0060877.1 MGP_LPJ_G0027191.1 mouse_genomes_project 3 60393606 60396887 + Mbnl1 protein_coding retained_intron MGP_LPJ_T0100695.1 MGP_LPJ_G0038958.1 mouse_genomes_project 3 98897854 98897990 - Gm22581 snoRNA snoRNA MGP_LPJ_T0063872.1 MGP_LPJ_G0027856.1 mouse_genomes_project 3 142883861 142901014 + MGP_LPJ_P0063872 Adh5 protein_coding protein_coding MGP_LPJ_T0063873.1 MGP_LPJ_G0027856.1 mouse_genomes_project 3 142883879 142886715 + Adh5 protein_coding retained_intron MGP_LPJ_T0063874.1 MGP_LPJ_G0027856.1 mouse_genomes_project 3 142883880 142887603 + Adh5 protein_coding retained_intron MGP_LPJ_T0063875.1 MGP_LPJ_G0027856.1 mouse_genomes_project 3 142883938 142886170 + Adh5 protein_coding retained_intron MGP_LPJ_T0063876.1 MGP_LPJ_G0027856.1 mouse_genomes_project 3 142883938 142888706 + MGP_LPJ_P0063876 Adh5 protein_coding nonsense_mediated_decay MGP_LPJ_T0063877.1 MGP_LPJ_G0027856.1 mouse_genomes_project 3 142883949 142898129 + MGP_LPJ_P0063877 Adh5 protein_coding nonsense_mediated_decay MGP_LPJ_T0063878.1 MGP_LPJ_G0027856.1 mouse_genomes_project 3 142883950 142900624 + MGP_LPJ_P0063878 Adh5 protein_coding unknown_likely_coding MGP_LPJ_T0063879.1 MGP_LPJ_G0027856.1 mouse_genomes_project 3 142895042 142898569 + Adh5 protein_coding retained_intron MGP_LPJ_T0007616.1 MGP_LPJ_G0006237.1 mouse_genomes_project 3 89314410 89319896 - AI849053 lincRNA lincRNA MGP_LPJ_T0001430.1 MGP_LPJ_G0001349.1 mouse_genomes_project 3 163695333 163696976 + TEC TEC MGP_LPJ_T0007676.1 MGP_LPJ_G0006279.1 mouse_genomes_project 3 110968050 110974796 - Gm12498 lincRNA lincRNA MGP_LPJ_T0001340.1 MGP_LPJ_G0001260.1 mouse_genomes_project 3 126806686 126810273 + TEC TEC MGP_LPJ_T0001344.1 MGP_LPJ_G0001264.1 mouse_genomes_project 3 127546882 127549180 - TEC TEC MGP_LPJ_T0062851.1 MGP_LPJ_G0027646.1 mouse_genomes_project 3 108503527 108583677 - MGP_LPJ_P0062851 Rap1a protein_coding protein_coding MGP_LPJ_T0062852.1 MGP_LPJ_G0027646.1 mouse_genomes_project 3 108504574 108528290 - MGP_LPJ_P0062852 Rap1a protein_coding nonsense_mediated_decay MGP_LPJ_T0062853.1 MGP_LPJ_G0027646.1 mouse_genomes_project 3 108504914 108583626 - MGP_LPJ_P0062853 Rap1a protein_coding protein_coding MGP_LPJ_T0062854.1 MGP_LPJ_G0027646.1 mouse_genomes_project 3 108516081 108583651 - MGP_LPJ_P0062854 Rap1a protein_coding protein_coding MGP_LPJ_T0013845.1 MGP_LPJ_G0011936.1 mouse_genomes_project 3 330883 331634 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014089.1 MGP_LPJ_G0012180.1 mouse_genomes_project 3 78152722 78153993 - processed_pseudogene processed_pseudogene MGP_LPJ_T0063265.1 MGP_LPJ_G0027744.1 mouse_genomes_project 3 120126647 120166205 - MGP_LPJ_P0063265 Slc35a3 protein_coding protein_coding MGP_LPJ_T0063266.1 MGP_LPJ_G0027744.1 mouse_genomes_project 3 120127122 120174932 - MGP_LPJ_P0063266 Slc35a3 protein_coding protein_coding MGP_LPJ_T0063267.1 MGP_LPJ_G0027744.1 mouse_genomes_project 3 120127163 120129932 - Slc35a3 protein_coding processed_transcript MGP_LPJ_T0063268.1 MGP_LPJ_G0027744.1 mouse_genomes_project 3 120134590 120165816 - MGP_LPJ_P0063268 Slc35a3 protein_coding protein_coding MGP_LPJ_T0063269.1 MGP_LPJ_G0027744.1 mouse_genomes_project 3 120134725 120166186 - MGP_LPJ_P0063269 Slc35a3 protein_coding protein_coding MGP_LPJ_T0063270.1 MGP_LPJ_G0027744.1 mouse_genomes_project 3 120144456 120166231 - Slc35a3 protein_coding retained_intron MGP_LPJ_T0063271.1 MGP_LPJ_G0027744.1 mouse_genomes_project 3 120148631 120166805 - MGP_LPJ_P0063271 Slc35a3 protein_coding protein_coding MGP_LPJ_T0001156.1 MGP_LPJ_G0001078.1 mouse_genomes_project 3 26382066 26383804 + TEC TEC MGP_LPJ_T0063139.1 MGP_LPJ_G0027716.1 mouse_genomes_project 3 111950842 111951235 - MGP_LPJ_P0063139 Gm9857 protein_coding protein_coding MGP_LPJ_T0098550.1 MGP_LPJ_G0036824.1 mouse_genomes_project 3 103163562 103165365 - Gm43463 sense_intronic sense_intronic MGP_LPJ_T0001396.1 MGP_LPJ_G0001315.1 mouse_genomes_project 3 142329385 142331723 + TEC TEC MGP_LPJ_T0063887.1 MGP_LPJ_G0027858.1 mouse_genomes_project 3 142982235 143022313 + MGP_LPJ_P0063887 Eif4e protein_coding protein_coding MGP_LPJ_T0063888.1 MGP_LPJ_G0027858.1 mouse_genomes_project 3 142982481 143018024 + MGP_LPJ_P0063888 Eif4e protein_coding protein_coding MGP_LPJ_T0063889.1 MGP_LPJ_G0027858.1 mouse_genomes_project 3 142986554 143018839 + MGP_LPJ_P0063889 Eif4e protein_coding protein_coding MGP_LPJ_T0063890.1 MGP_LPJ_G0027858.1 mouse_genomes_project 3 142986554 143018183 + MGP_LPJ_P0063890 Eif4e protein_coding protein_coding MGP_LPJ_T0063891.1 MGP_LPJ_G0027858.1 mouse_genomes_project 3 142986565 143018299 + MGP_LPJ_P0063891 Eif4e protein_coding protein_coding MGP_LPJ_T0063892.1 MGP_LPJ_G0027858.1 mouse_genomes_project 3 143013482 143016351 + Eif4e protein_coding retained_intron MGP_LPJ_T0001196.1 MGP_LPJ_G0001118.1 mouse_genomes_project 3 39741633 39745279 + TEC TEC MGP_LPJ_T0001183.1 MGP_LPJ_G0001105.1 mouse_genomes_project 3 35113404 35116623 - TEC TEC MGP_LPJ_T0060465.1 MGP_LPJ_G0027111.1 mouse_genomes_project 3 36290762 36295460 + MGP_LPJ_P0060465 Spry1 protein_coding protein_coding MGP_LPJ_T0060466.1 MGP_LPJ_G0027111.1 mouse_genomes_project 3 36290773 36295460 + MGP_LPJ_P0060466 Spry1 protein_coding protein_coding MGP_LPJ_T0060467.1 MGP_LPJ_G0027111.1 mouse_genomes_project 3 36290895 36295460 + MGP_LPJ_P0060467 Spry1 protein_coding protein_coding MGP_LPJ_T0061260.1 MGP_LPJ_G0027285.1 mouse_genomes_project 3 86605263 86619183 - Fam160a1 protein_coding retained_intron MGP_LPJ_T0061261.1 MGP_LPJ_G0027285.1 mouse_genomes_project 3 86605265 86771855 - MGP_LPJ_P0061261 Fam160a1 protein_coding nonsense_mediated_decay MGP_LPJ_T0061262.1 MGP_LPJ_G0027285.1 mouse_genomes_project 3 86605265 86692804 - MGP_LPJ_P0061262 Fam160a1 protein_coding protein_coding MGP_LPJ_T0061263.1 MGP_LPJ_G0027285.1 mouse_genomes_project 3 86605267 86687976 - MGP_LPJ_P0061263 Fam160a1 protein_coding protein_coding MGP_LPJ_T0062232.1 MGP_LPJ_G0027507.1 mouse_genomes_project 3 97254379 97265328 - MGP_LPJ_P0062232 Bnipl protein_coding protein_coding MGP_LPJ_T0062233.1 MGP_LPJ_G0027507.1 mouse_genomes_project 3 97254403 97265184 - MGP_LPJ_P0062233 Bnipl protein_coding protein_coding MGP_LPJ_T0062234.1 MGP_LPJ_G0027507.1 mouse_genomes_project 3 97254933 97265271 - MGP_LPJ_P0062234 Bnipl protein_coding protein_coding MGP_LPJ_T0062235.1 MGP_LPJ_G0027507.1 mouse_genomes_project 3 97256159 97265283 - MGP_LPJ_P0062235 Bnipl protein_coding protein_coding MGP_LPJ_T0062236.1 MGP_LPJ_G0027507.1 mouse_genomes_project 3 97258314 97262714 - Bnipl protein_coding retained_intron MGP_LPJ_T0014157.1 MGP_LPJ_G0012248.1 mouse_genomes_project 3 99314306 99314909 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007563.1 MGP_LPJ_G0006194.1 mouse_genomes_project 3 53071430 53081500 + Gm43565 lincRNA lincRNA MGP_LPJ_T0063797.1 MGP_LPJ_G0027837.1 mouse_genomes_project 3 140404736 140684668 - MGP_LPJ_P0063797 Bank1 protein_coding protein_coding MGP_LPJ_T0063798.1 MGP_LPJ_G0027837.1 mouse_genomes_project 3 140404736 140684648 - MGP_LPJ_P0063798 Bank1 protein_coding protein_coding MGP_LPJ_T0063799.1 MGP_LPJ_G0027837.1 mouse_genomes_project 3 140404822 140684627 - MGP_LPJ_P0063799 Bank1 protein_coding protein_coding MGP_LPJ_T0063800.1 MGP_LPJ_G0027837.1 mouse_genomes_project 3 140405295 140406090 - Bank1 protein_coding retained_intron MGP_LPJ_T0063801.1 MGP_LPJ_G0027837.1 mouse_genomes_project 3 140405310 140407477 - Bank1 protein_coding retained_intron MGP_LPJ_T0063802.1 MGP_LPJ_G0027837.1 mouse_genomes_project 3 140560224 140601684 - Bank1 protein_coding retained_intron MGP_LPJ_T0063643.1 MGP_LPJ_G0027808.1 mouse_genomes_project 3 134923606 134938433 - MGP_LPJ_P0063643 Ostc protein_coding protein_coding MGP_LPJ_T0063644.1 MGP_LPJ_G0027808.1 mouse_genomes_project 3 134923613 134924314 - Ostc protein_coding retained_intron MGP_LPJ_T0063645.1 MGP_LPJ_G0027808.1 mouse_genomes_project 3 134936705 134938405 - Ostc protein_coding retained_intron MGP_LPJ_T0061984.1 MGP_LPJ_G0027427.1 mouse_genomes_project 3 94026803 94028059 + MGP_LPJ_P0061984 Sprr2f protein_coding protein_coding MGP_LPJ_T0013852.1 MGP_LPJ_G0011943.1 mouse_genomes_project 3 1948236 1949458 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014105.1 MGP_LPJ_G0012196.1 mouse_genomes_project 3 85450603 85451167 - processed_pseudogene processed_pseudogene MGP_LPJ_T0063425.1 MGP_LPJ_G0027774.1 mouse_genomes_project 3 126890164 127069626 - MGP_LPJ_P0063425 Synpo2 protein_coding protein_coding MGP_LPJ_T0063426.1 MGP_LPJ_G0027774.1 mouse_genomes_project 3 126890164 126927901 - MGP_LPJ_P0063426 Synpo2 protein_coding protein_coding MGP_LPJ_T0063427.1 MGP_LPJ_G0027774.1 mouse_genomes_project 3 126890164 127069677 - MGP_LPJ_P0063427 Synpo2 protein_coding protein_coding MGP_LPJ_T0063428.1 MGP_LPJ_G0027774.1 mouse_genomes_project 3 126921683 127069677 - MGP_LPJ_P0063428 Synpo2 protein_coding protein_coding MGP_LPJ_T0063429.1 MGP_LPJ_G0027774.1 mouse_genomes_project 3 126923766 126928077 - MGP_LPJ_P0063429 Synpo2 protein_coding protein_coding MGP_LPJ_T0063430.1 MGP_LPJ_G0027774.1 mouse_genomes_project 3 126926047 126929766 - MGP_LPJ_P0063430 Synpo2 protein_coding protein_coding MGP_LPJ_T0063431.1 MGP_LPJ_G0027774.1 mouse_genomes_project 3 126995252 127069679 - Synpo2 protein_coding processed_transcript MGP_LPJ_T0007551.1 MGP_LPJ_G0006184.1 mouse_genomes_project 3 48538629 48580451 + Gm20557 lincRNA lincRNA MGP_LPJ_T0014203.1 MGP_LPJ_G0012294.1 mouse_genomes_project 3 111582189 111582614 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060919.1 MGP_LPJ_G0027201.1 mouse_genomes_project 3 63830071 63859416 - MGP_LPJ_P0060919 Slc33a1 protein_coding protein_coding MGP_LPJ_T0060920.1 MGP_LPJ_G0027201.1 mouse_genomes_project 3 63835983 63859518 - MGP_LPJ_P0060920 Slc33a1 protein_coding protein_coding MGP_LPJ_T0060921.1 MGP_LPJ_G0027201.1 mouse_genomes_project 3 63836067 63859122 - MGP_LPJ_P0060921 Slc33a1 protein_coding protein_coding MGP_LPJ_T0014138.1 MGP_LPJ_G0012229.1 mouse_genomes_project 3 95034851 95035306 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001215.1 MGP_LPJ_G0001137.1 mouse_genomes_project 3 50166365 50167641 - TEC TEC MGP_LPJ_T0062849.1 MGP_LPJ_G0027645.1 mouse_genomes_project 3 108480835 108497103 + MGP_LPJ_P0062849 Fam212b protein_coding protein_coding MGP_LPJ_T0062850.1 MGP_LPJ_G0027645.1 mouse_genomes_project 3 108481699 108494413 + MGP_LPJ_P0062850 Fam212b protein_coding protein_coding MGP_LPJ_T0100655.1 MGP_LPJ_G0038918.1 mouse_genomes_project 3 15031447 15031591 - Gm24963 snoRNA snoRNA MGP_LPJ_T0062381.1 MGP_LPJ_G0027532.1 mouse_genomes_project 3 98105641 98166165 - MGP_LPJ_P0062381 Vps45 protein_coding protein_coding MGP_LPJ_T0062382.1 MGP_LPJ_G0027532.1 mouse_genomes_project 3 98152720 98165529 - Vps45 protein_coding retained_intron MGP_LPJ_T0062383.1 MGP_LPJ_G0027532.1 mouse_genomes_project 3 98164585 98165418 - Vps45 protein_coding processed_transcript MGP_LPJ_T0004432.1 MGP_LPJ_G0003866.1 mouse_genomes_project 3 160052021 160054707 - Gm20389 antisense antisense MGP_LPJ_T0101330.1 MGP_LPJ_G0039540.1 mouse_genomes_project 3 98774868 98800077 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101331.1 MGP_LPJ_G0039540.1 mouse_genomes_project 3 98774871 98800076 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101332.1 MGP_LPJ_G0039540.1 mouse_genomes_project 3 98775833 98778782 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0062514.1 MGP_LPJ_G0027569.1 mouse_genomes_project 3 99841247 99868661 + MGP_LPJ_P0062514 Fmo5 protein_coding protein_coding MGP_LPJ_T0062515.1 MGP_LPJ_G0027569.1 mouse_genomes_project 3 99841281 99865933 + MGP_LPJ_P0062515 Fmo5 protein_coding protein_coding MGP_LPJ_T0062516.1 MGP_LPJ_G0027569.1 mouse_genomes_project 3 99841291 99842377 + Fmo5 protein_coding retained_intron MGP_LPJ_T0062517.1 MGP_LPJ_G0027569.1 mouse_genomes_project 3 99841300 99865983 + MGP_LPJ_P0062517 Fmo5 protein_coding protein_coding MGP_LPJ_T0062518.1 MGP_LPJ_G0027569.1 mouse_genomes_project 3 99841326 99852406 + Fmo5 protein_coding processed_transcript MGP_LPJ_T0001279.1 MGP_LPJ_G0001199.1 mouse_genomes_project 3 77079450 77084621 + TEC TEC MGP_LPJ_T0101537.1 MGP_LPJ_G0039650.1 mouse_genomes_project 3 39609130 39610393 + transcribed_unprocessed_pseudogene retained_intron MGP_LPJ_T0101538.1 MGP_LPJ_G0039650.1 mouse_genomes_project 3 39609312 39649499 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0061471.1 MGP_LPJ_G0027332.1 mouse_genomes_project 3 89581365 89595951 - MGP_LPJ_P0061471 Slc25a44 protein_coding protein_coding MGP_LPJ_T0061472.1 MGP_LPJ_G0027332.1 mouse_genomes_project 3 89581365 89595952 - MGP_LPJ_P0061472 Slc25a44 protein_coding protein_coding MGP_LPJ_T0061473.1 MGP_LPJ_G0027332.1 mouse_genomes_project 3 89581366 89595983 - MGP_LPJ_P0061473 Slc25a44 protein_coding protein_coding MGP_LPJ_T0061474.1 MGP_LPJ_G0027332.1 mouse_genomes_project 3 89581366 89595956 - MGP_LPJ_P0061474 Slc25a44 protein_coding protein_coding MGP_LPJ_T0013885.1 MGP_LPJ_G0011976.1 mouse_genomes_project 3 9950286 9950653 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004371.1 MGP_LPJ_G0003820.1 mouse_genomes_project 3 112018284 112020355 + Gm43221 antisense antisense MGP_LPJ_T0007731.1 MGP_LPJ_G0006323.1 mouse_genomes_project 3 138710164 138729234 - 4930539C22Rik lincRNA lincRNA MGP_LPJ_T0060718.1 MGP_LPJ_G0027156.1 mouse_genomes_project 3 54322710 54343387 - MGP_LPJ_P0060718 Sertm1 protein_coding protein_coding MGP_LPJ_T0060719.1 MGP_LPJ_G0027156.1 mouse_genomes_project 3 54322713 54344243 - MGP_LPJ_P0060719 Sertm1 protein_coding protein_coding MGP_LPJ_T0100688.1 MGP_LPJ_G0038951.1 mouse_genomes_project 3 88642774 88642894 - Gm25167 snoRNA snoRNA MGP_LPJ_T0001157.1 MGP_LPJ_G0001079.1 mouse_genomes_project 3 27275386 27277470 + TEC TEC MGP_LPJ_T0001395.1 MGP_LPJ_G0001314.1 mouse_genomes_project 3 141150947 141151950 - TEC TEC MGP_LPJ_T0060426.1 MGP_LPJ_G0027103.1 mouse_genomes_project 3 35678807 35731418 + MGP_LPJ_P0060426 Adad1 protein_coding protein_coding MGP_LPJ_T0060427.1 MGP_LPJ_G0027103.1 mouse_genomes_project 3 35678911 35730416 + MGP_LPJ_P0060427 Adad1 protein_coding protein_coding MGP_LPJ_T0060428.1 MGP_LPJ_G0027103.1 mouse_genomes_project 3 35678958 35682636 + Adad1 protein_coding retained_intron MGP_LPJ_T0060429.1 MGP_LPJ_G0027103.1 mouse_genomes_project 3 35701584 35708730 + Adad1 protein_coding retained_intron MGP_LPJ_T0060430.1 MGP_LPJ_G0027103.1 mouse_genomes_project 3 35701721 35741446 + MGP_LPJ_P0060430 Adad1 protein_coding protein_coding MGP_LPJ_T0014029.1 MGP_LPJ_G0012120.1 mouse_genomes_project 3 59722716 59723231 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001328.1 MGP_LPJ_G0001248.1 mouse_genomes_project 3 122479798 122482032 + TEC TEC MGP_LPJ_T0098711.1 MGP_LPJ_G0036975.1 mouse_genomes_project 3 150230246 150231281 + D530037P16Rik sense_overlapping sense_overlapping MGP_LPJ_T0014208.1 MGP_LPJ_G0012299.1 mouse_genomes_project 3 113637739 113638073 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013905.1 MGP_LPJ_G0011996.1 mouse_genomes_project 3 15465793 15466133 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007707.1 MGP_LPJ_G0006302.1 mouse_genomes_project 3 130164272 130166295 + Gm42827 lincRNA lincRNA MGP_LPJ_T0062197.1 MGP_LPJ_G0027502.1 mouse_genomes_project 3 97152105 97156201 + Sema6c protein_coding processed_transcript MGP_LPJ_T0062198.1 MGP_LPJ_G0027502.1 mouse_genomes_project 3 97152142 97156086 + Sema6c protein_coding processed_transcript MGP_LPJ_T0062199.1 MGP_LPJ_G0027502.1 mouse_genomes_project 3 97152142 97165310 + MGP_LPJ_P0062199 Sema6c protein_coding nonsense_mediated_decay MGP_LPJ_T0062200.1 MGP_LPJ_G0027502.1 mouse_genomes_project 3 97152142 97160004 + MGP_LPJ_P0062200 Sema6c protein_coding nonsense_mediated_decay MGP_LPJ_T0062201.1 MGP_LPJ_G0027502.1 mouse_genomes_project 3 97152149 97156140 + MGP_LPJ_P0062201 Sema6c protein_coding protein_coding MGP_LPJ_T0062202.1 MGP_LPJ_G0027502.1 mouse_genomes_project 3 97152153 97165681 + Sema6c protein_coding retained_intron MGP_LPJ_T0062203.1 MGP_LPJ_G0027502.1 mouse_genomes_project 3 97152153 97165681 + MGP_LPJ_P0062203 Sema6c protein_coding protein_coding MGP_LPJ_T0062204.1 MGP_LPJ_G0027502.1 mouse_genomes_project 3 97152153 97165681 + MGP_LPJ_P0062204 Sema6c protein_coding nonsense_mediated_decay MGP_LPJ_T0062205.1 MGP_LPJ_G0027502.1 mouse_genomes_project 3 97152153 97165681 + MGP_LPJ_P0062205 Sema6c protein_coding protein_coding MGP_LPJ_T0062206.1 MGP_LPJ_G0027502.1 mouse_genomes_project 3 97155964 97165681 + MGP_LPJ_P0062206 Sema6c protein_coding protein_coding MGP_LPJ_T0062207.1 MGP_LPJ_G0027502.1 mouse_genomes_project 3 97155964 97165519 + MGP_LPJ_P0062207 Sema6c protein_coding protein_coding MGP_LPJ_T0062208.1 MGP_LPJ_G0027502.1 mouse_genomes_project 3 97156032 97164973 + MGP_LPJ_P0062208 Sema6c protein_coding protein_coding MGP_LPJ_T0062209.1 MGP_LPJ_G0027502.1 mouse_genomes_project 3 97159869 97161797 + Sema6c protein_coding processed_transcript MGP_LPJ_T0062210.1 MGP_LPJ_G0027502.1 mouse_genomes_project 3 97161979 97163552 + Sema6c protein_coding retained_intron MGP_LPJ_T0062211.1 MGP_LPJ_G0027502.1 mouse_genomes_project 3 97162461 97163633 + Sema6c protein_coding retained_intron MGP_LPJ_T0014197.1 MGP_LPJ_G0012288.1 mouse_genomes_project 3 110859744 110859892 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001236.1 MGP_LPJ_G0001156.1 mouse_genomes_project 3 51261318 51264599 - TEC TEC MGP_LPJ_T0061972.1 MGP_LPJ_G0027417.1 mouse_genomes_project 3 92125345 92142278 + MGP_LPJ_P0061972 Pglyrp4 protein_coding protein_coding MGP_LPJ_T0061973.1 MGP_LPJ_G0027417.1 mouse_genomes_project 3 92125350 92141275 + MGP_LPJ_P0061973 Pglyrp4 protein_coding protein_coding MGP_LPJ_T0061974.1 MGP_LPJ_G0027417.1 mouse_genomes_project 3 92138911 92142276 + Pglyrp4 protein_coding processed_transcript MGP_LPJ_T0062695.1 MGP_LPJ_G0027615.1 mouse_genomes_project 3 105631533 105641176 + MGP_LPJ_P0062695 Nras protein_coding protein_coding MGP_LPJ_T0062696.1 MGP_LPJ_G0027615.1 mouse_genomes_project 3 105631596 105635775 + MGP_LPJ_P0062696 Nras protein_coding nonsense_mediated_decay MGP_LPJ_T0062697.1 MGP_LPJ_G0027615.1 mouse_genomes_project 3 105631615 105637625 + MGP_LPJ_P0062697 Nras protein_coding protein_coding MGP_LPJ_T0062698.1 MGP_LPJ_G0027615.1 mouse_genomes_project 3 105631839 105633559 + MGP_LPJ_P0062698 Nras protein_coding protein_coding MGP_LPJ_T0062699.1 MGP_LPJ_G0027615.1 mouse_genomes_project 3 105631841 105636655 + MGP_LPJ_P0062699 Nras protein_coding protein_coding MGP_LPJ_T0062700.1 MGP_LPJ_G0027615.1 mouse_genomes_project 3 105631988 105635774 + MGP_LPJ_P0062700 Nras protein_coding protein_coding MGP_LPJ_T0062701.1 MGP_LPJ_G0027615.1 mouse_genomes_project 3 105632148 105639745 + MGP_LPJ_P0062701 Nras protein_coding nonsense_mediated_decay MGP_LPJ_T0062702.1 MGP_LPJ_G0027615.1 mouse_genomes_project 3 105632148 105641168 + MGP_LPJ_P0062702 Nras protein_coding nonsense_mediated_decay MGP_LPJ_T0062703.1 MGP_LPJ_G0027615.1 mouse_genomes_project 3 105632233 105636205 + Nras protein_coding retained_intron MGP_LPJ_T0004256.1 MGP_LPJ_G0003746.1 mouse_genomes_project 3 51238594 51249045 + Gm20089 antisense antisense MGP_LPJ_T0010555.1 MGP_LPJ_G0008673.1 mouse_genomes_project 3 95175052 95175161 - Gm22752 miRNA miRNA MGP_LPJ_T0063684.1 MGP_LPJ_G0027819.1 mouse_genomes_project 3 136944974 137104081 + MGP_LPJ_P0063684 Tbck protein_coding protein_coding MGP_LPJ_T0063685.1 MGP_LPJ_G0027819.1 mouse_genomes_project 3 136944998 136960728 + Tbck protein_coding retained_intron MGP_LPJ_T0063686.1 MGP_LPJ_G0027819.1 mouse_genomes_project 3 136945030 137064495 + Tbck protein_coding processed_transcript MGP_LPJ_T0063687.1 MGP_LPJ_G0027819.1 mouse_genomes_project 3 137054565 137100219 + Tbck protein_coding processed_transcript MGP_LPJ_T0001375.1 MGP_LPJ_G0001294.1 mouse_genomes_project 3 134762476 134768612 + TEC TEC MGP_LPJ_T0014038.1 MGP_LPJ_G0012129.1 mouse_genomes_project 3 62767026 62768304 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100709.1 MGP_LPJ_G0038972.1 mouse_genomes_project 3 124307648 124307776 - Gm25013 snoRNA snoRNA MGP_LPJ_T0062895.1 MGP_LPJ_G0027659.1 mouse_genomes_project 3 109323176 109329354 + Dennd2d protein_coding processed_transcript MGP_LPJ_T0062896.1 MGP_LPJ_G0027659.1 mouse_genomes_project 3 109323202 109345585 + MGP_LPJ_P0062896 Dennd2d protein_coding protein_coding MGP_LPJ_T0062897.1 MGP_LPJ_G0027659.1 mouse_genomes_project 3 109323221 109329372 + MGP_LPJ_P0062897 Dennd2d protein_coding nonsense_mediated_decay MGP_LPJ_T0062898.1 MGP_LPJ_G0027659.1 mouse_genomes_project 3 109326816 109342365 + MGP_LPJ_P0062898 Dennd2d protein_coding protein_coding MGP_LPJ_T0062899.1 MGP_LPJ_G0027659.1 mouse_genomes_project 3 109328184 109329408 + Dennd2d protein_coding retained_intron MGP_LPJ_T0062900.1 MGP_LPJ_G0027659.1 mouse_genomes_project 3 109333941 109336066 + Dennd2d protein_coding retained_intron MGP_LPJ_T0004293.1 MGP_LPJ_G0003773.1 mouse_genomes_project 3 89807301 89811919 - Gm20652 antisense antisense MGP_LPJ_T0060699.1 MGP_LPJ_G0027152.1 mouse_genomes_project 3 54132490 54139219 - MGP_LPJ_P0060699 Exosc8 protein_coding protein_coding MGP_LPJ_T0060700.1 MGP_LPJ_G0027152.1 mouse_genomes_project 3 54132493 54133271 - Exosc8 protein_coding retained_intron MGP_LPJ_T0060701.1 MGP_LPJ_G0027152.1 mouse_genomes_project 3 54132494 54138863 - Exosc8 protein_coding retained_intron MGP_LPJ_T0060702.1 MGP_LPJ_G0027152.1 mouse_genomes_project 3 54133653 54138628 - Exosc8 protein_coding retained_intron MGP_LPJ_T0060703.1 MGP_LPJ_G0027152.1 mouse_genomes_project 3 54133665 54138139 - MGP_LPJ_P0060703 Exosc8 protein_coding nonsense_mediated_decay MGP_LPJ_T0060704.1 MGP_LPJ_G0027152.1 mouse_genomes_project 3 54135110 54139193 - Exosc8 protein_coding retained_intron MGP_LPJ_T0060705.1 MGP_LPJ_G0027152.1 mouse_genomes_project 3 54135805 54138872 - MGP_LPJ_P0060705 Exosc8 protein_coding protein_coding MGP_LPJ_T0060706.1 MGP_LPJ_G0027152.1 mouse_genomes_project 3 54135954 54138163 - Exosc8 protein_coding retained_intron MGP_LPJ_T0060707.1 MGP_LPJ_G0027152.1 mouse_genomes_project 3 54135964 54137036 - Exosc8 protein_coding retained_intron MGP_LPJ_T0060708.1 MGP_LPJ_G0027152.1 mouse_genomes_project 3 54137413 54138861 - Exosc8 protein_coding retained_intron MGP_LPJ_T0060709.1 MGP_LPJ_G0027152.1 mouse_genomes_project 3 54137768 54138861 - Exosc8 protein_coding retained_intron MGP_LPJ_T0060431.1 MGP_LPJ_G0027104.1 mouse_genomes_project 3 35739980 35746725 - MGP_LPJ_P0060431 Il2 protein_coding protein_coding MGP_LPJ_T0007571.1 MGP_LPJ_G0006199.1 mouse_genomes_project 3 57515310 57519881 - Gm42512 lincRNA lincRNA MGP_LPJ_T0098538.1 MGP_LPJ_G0036812.1 mouse_genomes_project 3 91390670 91393095 + sense_intronic sense_intronic MGP_LPJ_T0061324.1 MGP_LPJ_G0027301.1 mouse_genomes_project 3 88820095 88831730 - MGP_LPJ_P0061324 Lrrc71 protein_coding protein_coding MGP_LPJ_T0061325.1 MGP_LPJ_G0027301.1 mouse_genomes_project 3 88821067 88831732 - Lrrc71 protein_coding retained_intron MGP_LPJ_T0061326.1 MGP_LPJ_G0027301.1 mouse_genomes_project 3 88821118 88821745 - Lrrc71 protein_coding processed_transcript MGP_LPJ_T0061327.1 MGP_LPJ_G0027301.1 mouse_genomes_project 3 88822158 88824213 - MGP_LPJ_P0061327 Lrrc71 protein_coding protein_coding MGP_LPJ_T0061328.1 MGP_LPJ_G0027301.1 mouse_genomes_project 3 88822253 88831571 - MGP_LPJ_P0061328 Lrrc71 protein_coding unknown_likely_coding MGP_LPJ_T0061329.1 MGP_LPJ_G0027301.1 mouse_genomes_project 3 88828391 88831701 - Lrrc71 protein_coding retained_intron MGP_LPJ_T0060768.1 MGP_LPJ_G0027165.1 mouse_genomes_project 3 56810199 56826508 - MGP_LPJ_P0060768 Tm4sf1 protein_coding protein_coding MGP_LPJ_T0060769.1 MGP_LPJ_G0027165.1 mouse_genomes_project 3 56810199 56819478 - MGP_LPJ_P0060769 Tm4sf1 protein_coding protein_coding MGP_LPJ_T0060770.1 MGP_LPJ_G0027165.1 mouse_genomes_project 3 56812072 56826560 - MGP_LPJ_P0060770 Tm4sf1 protein_coding protein_coding MGP_LPJ_T0060771.1 MGP_LPJ_G0027165.1 mouse_genomes_project 3 56812104 56819141 - Tm4sf1 protein_coding processed_transcript MGP_LPJ_T0060772.1 MGP_LPJ_G0027165.1 mouse_genomes_project 3 56817371 56819714 - MGP_LPJ_P0060772 Tm4sf1 protein_coding protein_coding MGP_LPJ_T0060773.1 MGP_LPJ_G0027165.1 mouse_genomes_project 3 56817407 56818292 - Tm4sf1 protein_coding retained_intron MGP_LPJ_T0100652.1 MGP_LPJ_G0038915.1 mouse_genomes_project 3 6037880 6037999 - Gm23670 snoRNA snoRNA MGP_LPJ_T0102082.1 MGP_LPJ_G0040119.1 mouse_genomes_project 3 59062923 59063158 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0061912.1 MGP_LPJ_G0027400.1 mouse_genomes_project 3 91827118 91842744 - MGP_LPJ_P0061912 Npr1 protein_coding protein_coding MGP_LPJ_T0061913.1 MGP_LPJ_G0027400.1 mouse_genomes_project 3 91827237 91828309 - Npr1 protein_coding retained_intron MGP_LPJ_T0061914.1 MGP_LPJ_G0027400.1 mouse_genomes_project 3 91831908 91834353 - Npr1 protein_coding processed_transcript MGP_LPJ_T0061915.1 MGP_LPJ_G0027400.1 mouse_genomes_project 3 91834275 91835816 - Npr1 protein_coding retained_intron MGP_LPJ_T0061916.1 MGP_LPJ_G0027400.1 mouse_genomes_project 3 91834294 91838298 - MGP_LPJ_P0061916 Npr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0010552.1 MGP_LPJ_G0008670.1 mouse_genomes_project 3 91633960 91634024 + Mir7012 miRNA miRNA MGP_LPJ_T0099389.1 MGP_LPJ_G0037652.1 mouse_genomes_project 3 53193003 53193106 + Gm24851 snRNA snRNA MGP_LPJ_T0014194.1 MGP_LPJ_G0012285.1 mouse_genomes_project 3 110242335 110243080 + processed_pseudogene processed_pseudogene MGP_LPJ_T0061976.1 MGP_LPJ_G0027419.1 mouse_genomes_project 3 92535816 92538479 - MGP_LPJ_P0061976 9130204L05Rik protein_coding protein_coding MGP_LPJ_T0001326.1 MGP_LPJ_G0001246.1 mouse_genomes_project 3 122126435 122130565 + TEC TEC MGP_LPJ_T0001378.1 MGP_LPJ_G0001297.1 mouse_genomes_project 3 134932578 134934931 - TEC TEC MGP_LPJ_T0062270.1 MGP_LPJ_G0027513.1 mouse_genomes_project 3 97480055 97539016 + Arnt protein_coding retained_intron MGP_LPJ_T0062271.1 MGP_LPJ_G0027513.1 mouse_genomes_project 3 97480055 97544470 + MGP_LPJ_P0062271 Arnt protein_coding protein_coding MGP_LPJ_T0062272.1 MGP_LPJ_G0027513.1 mouse_genomes_project 3 97480057 97546137 + MGP_LPJ_P0062272 Arnt protein_coding protein_coding MGP_LPJ_T0062273.1 MGP_LPJ_G0027513.1 mouse_genomes_project 3 97480071 97546134 + MGP_LPJ_P0062273 Arnt protein_coding protein_coding MGP_LPJ_T0062274.1 MGP_LPJ_G0027513.1 mouse_genomes_project 3 97480095 97508425 + MGP_LPJ_P0062274 Arnt protein_coding protein_coding MGP_LPJ_T0062275.1 MGP_LPJ_G0027513.1 mouse_genomes_project 3 97480095 97544474 + MGP_LPJ_P0062275 Arnt protein_coding protein_coding MGP_LPJ_T0062276.1 MGP_LPJ_G0027513.1 mouse_genomes_project 3 97480186 97540084 + Arnt protein_coding retained_intron MGP_LPJ_T0062277.1 MGP_LPJ_G0027513.1 mouse_genomes_project 3 97514660 97544470 + Arnt protein_coding retained_intron MGP_LPJ_T0062278.1 MGP_LPJ_G0027513.1 mouse_genomes_project 3 97521356 97527574 + Arnt protein_coding retained_intron MGP_LPJ_T0062279.1 MGP_LPJ_G0027513.1 mouse_genomes_project 3 97523396 97534733 + MGP_LPJ_P0062279 Arnt protein_coding protein_coding MGP_LPJ_T0062280.1 MGP_LPJ_G0027513.1 mouse_genomes_project 3 97536826 97537828 + Arnt protein_coding retained_intron MGP_LPJ_T0014022.1 MGP_LPJ_G0012113.1 mouse_genomes_project 3 58264103 58265210 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014294.1 MGP_LPJ_G0012385.1 mouse_genomes_project 3 140314409 140314709 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060256.1 MGP_LPJ_G0027078.1 mouse_genomes_project 3 30957654 30997915 - MGP_LPJ_P0060256 Gnb4 protein_coding protein_coding MGP_LPJ_T0060257.1 MGP_LPJ_G0027078.1 mouse_genomes_project 3 30961319 30997855 - Gnb4 protein_coding retained_intron MGP_LPJ_T0060258.1 MGP_LPJ_G0027078.1 mouse_genomes_project 3 30961319 30997847 - MGP_LPJ_P0060258 Gnb4 protein_coding protein_coding MGP_LPJ_T0060259.1 MGP_LPJ_G0027078.1 mouse_genomes_project 3 30962382 30997852 - MGP_LPJ_P0060259 Gnb4 protein_coding nonsense_mediated_decay MGP_LPJ_T0060260.1 MGP_LPJ_G0027078.1 mouse_genomes_project 3 30965049 30975536 - Gnb4 protein_coding retained_intron MGP_LPJ_T0060261.1 MGP_LPJ_G0027078.1 mouse_genomes_project 3 30968479 30997809 - MGP_LPJ_P0060261 Gnb4 protein_coding protein_coding MGP_LPJ_T0060262.1 MGP_LPJ_G0027078.1 mouse_genomes_project 3 30969555 30997855 - Gnb4 protein_coding retained_intron MGP_LPJ_T0060263.1 MGP_LPJ_G0027078.1 mouse_genomes_project 3 30977192 30997859 - Gnb4 protein_coding retained_intron MGP_LPJ_T0001195.1 MGP_LPJ_G0001117.1 mouse_genomes_project 3 39579602 39580572 - TEC TEC MGP_LPJ_T0013866.1 MGP_LPJ_G0011957.1 mouse_genomes_project 3 5217201 5217786 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001356.1 MGP_LPJ_G0001276.1 mouse_genomes_project 3 130963406 130964446 - TEC TEC MGP_LPJ_T0098416.1 MGP_LPJ_G0036697.1 mouse_genomes_project 3 69243976 69244319 - Gm22009 scaRNA scaRNA MGP_LPJ_T0061985.1 MGP_LPJ_G0027428.1 mouse_genomes_project 3 94046993 94048580 + MGP_LPJ_P0061985 Sprr2h protein_coding protein_coding MGP_LPJ_T0061986.1 MGP_LPJ_G0027428.1 mouse_genomes_project 3 94047008 94048355 + MGP_LPJ_P0061986 Sprr2h protein_coding protein_coding MGP_LPJ_T0060052.1 MGP_LPJ_G0027038.1 mouse_genomes_project 3 18079349 18105279 - MGP_LPJ_P0060052 Cpa3 protein_coding protein_coding MGP_LPJ_T0060053.1 MGP_LPJ_G0027038.1 mouse_genomes_project 3 18092522 18103845 - Cpa3 protein_coding processed_transcript MGP_LPJ_T0014163.1 MGP_LPJ_G0012254.1 mouse_genomes_project 3 101615179 101615708 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060439.1 MGP_LPJ_G0027108.1 mouse_genomes_project 3 35978975 36043380 + MGP_LPJ_P0060439 Fgf2 protein_coding protein_coding MGP_LPJ_T0060440.1 MGP_LPJ_G0027108.1 mouse_genomes_project 3 35979282 36048086 + MGP_LPJ_P0060440 Fgf2 protein_coding protein_coding MGP_LPJ_T0060441.1 MGP_LPJ_G0027108.1 mouse_genomes_project 3 35979479 36042804 + MGP_LPJ_P0060441 Fgf2 protein_coding protein_coding MGP_LPJ_T0060442.1 MGP_LPJ_G0027108.1 mouse_genomes_project 3 35999409 36042804 + Fgf2 protein_coding processed_transcript MGP_LPJ_T0060443.1 MGP_LPJ_G0027108.1 mouse_genomes_project 3 36014049 36042804 + Fgf2 protein_coding processed_transcript MGP_LPJ_T0060444.1 MGP_LPJ_G0027108.1 mouse_genomes_project 3 36014145 36042804 + MGP_LPJ_P0060444 Fgf2 protein_coding protein_coding MGP_LPJ_T0060445.1 MGP_LPJ_G0027108.1 mouse_genomes_project 3 36014145 36042804 + MGP_LPJ_P0060445 Fgf2 protein_coding protein_coding MGP_LPJ_T0060446.1 MGP_LPJ_G0027108.1 mouse_genomes_project 3 36042547 36042804 + Fgf2 protein_coding retained_intron MGP_LPJ_T0061416.1 MGP_LPJ_G0027320.1 mouse_genomes_project 3 89358137 89369973 - MGP_LPJ_P0061416 Rhbg protein_coding protein_coding MGP_LPJ_T0101321.1 MGP_LPJ_G0039537.1 mouse_genomes_project 3 65535298 65554506 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101322.1 MGP_LPJ_G0039537.1 mouse_genomes_project 3 65536732 65537206 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0101323.1 MGP_LPJ_G0039537.1 mouse_genomes_project 3 65543344 65555693 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101324.1 MGP_LPJ_G0039537.1 mouse_genomes_project 3 65553813 65555535 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101325.1 MGP_LPJ_G0039537.1 mouse_genomes_project 3 65553846 65555701 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0013926.1 MGP_LPJ_G0012017.1 mouse_genomes_project 3 22920151 22920434 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017958.1 MGP_LPJ_G0015441.1 mouse_genomes_project 3 132212850 132325637 - D030025E07Rik processed_transcript lincRNA MGP_LPJ_T0017959.1 MGP_LPJ_G0015441.1 mouse_genomes_project 3 132220026 132229281 - D030025E07Rik processed_transcript lincRNA MGP_LPJ_T0017960.1 MGP_LPJ_G0015441.1 mouse_genomes_project 3 132220403 132325640 - D030025E07Rik processed_transcript retained_intron MGP_LPJ_T0017961.1 MGP_LPJ_G0015441.1 mouse_genomes_project 3 132237777 132325587 - D030025E07Rik processed_transcript retained_intron MGP_LPJ_T0017962.1 MGP_LPJ_G0015441.1 mouse_genomes_project 3 132287558 132325626 - D030025E07Rik processed_transcript lincRNA MGP_LPJ_T0007696.1 MGP_LPJ_G0006295.1 mouse_genomes_project 3 125365486 125374041 - A730020M07Rik lincRNA lincRNA MGP_LPJ_T0007697.1 MGP_LPJ_G0006295.1 mouse_genomes_project 3 125367687 125374044 - A730020M07Rik lincRNA lincRNA MGP_LPJ_T0007698.1 MGP_LPJ_G0006295.1 mouse_genomes_project 3 125367689 125373926 - A730020M07Rik lincRNA lincRNA MGP_LPJ_T0004236.1 MGP_LPJ_G0003731.1 mouse_genomes_project 3 31338679 31384794 + Gm37459 antisense antisense MGP_LPJ_T0001252.1 MGP_LPJ_G0001172.1 mouse_genomes_project 3 55583027 55586031 - TEC TEC MGP_LPJ_T0007462.1 MGP_LPJ_G0006121.1 mouse_genomes_project 3 6455565 6466321 + 4930539M17Rik lincRNA lincRNA MGP_LPJ_T0063410.1 MGP_LPJ_G0027772.1 mouse_genomes_project 3 126740129 126795799 - MGP_LPJ_P0063410 Usp53 protein_coding protein_coding MGP_LPJ_T0063411.1 MGP_LPJ_G0027772.1 mouse_genomes_project 3 126755830 126758253 - Usp53 protein_coding retained_intron MGP_LPJ_T0063412.1 MGP_LPJ_G0027772.1 mouse_genomes_project 3 126759922 126795612 - MGP_LPJ_P0063412 Usp53 protein_coding nonsense_mediated_decay MGP_LPJ_T0063413.1 MGP_LPJ_G0027772.1 mouse_genomes_project 3 126760818 126795795 - MGP_LPJ_P0063413 Usp53 protein_coding protein_coding MGP_LPJ_T0063414.1 MGP_LPJ_G0027772.1 mouse_genomes_project 3 126763748 126795793 - MGP_LPJ_P0063414 Usp53 protein_coding protein_coding MGP_LPJ_T0063415.1 MGP_LPJ_G0027772.1 mouse_genomes_project 3 126766295 126795799 - Usp53 protein_coding retained_intron MGP_LPJ_T0063416.1 MGP_LPJ_G0027772.1 mouse_genomes_project 3 126768843 126771247 - Usp53 protein_coding retained_intron MGP_LPJ_T0063417.1 MGP_LPJ_G0027772.1 mouse_genomes_project 3 126768886 126795760 - MGP_LPJ_P0063417 Usp53 protein_coding protein_coding MGP_LPJ_T0063418.1 MGP_LPJ_G0027772.1 mouse_genomes_project 3 126769556 126772947 - Usp53 protein_coding retained_intron MGP_LPJ_T0063419.1 MGP_LPJ_G0027772.1 mouse_genomes_project 3 126779222 126795182 - Usp53 protein_coding retained_intron MGP_LPJ_T0004434.1 MGP_LPJ_G0003868.1 mouse_genomes_project 3 162999664 163006240 - Gm43159 antisense antisense MGP_LPJ_T0059933.1 MGP_LPJ_G0027006.1 mouse_genomes_project 3 7871939 7904478 + MGP_LPJ_P0059933 Chmp4c protein_coding protein_coding MGP_LPJ_T0059934.1 MGP_LPJ_G0027006.1 mouse_genomes_project 3 7871990 7938762 + MGP_LPJ_P0059934 Chmp4c protein_coding nonsense_mediated_decay MGP_LPJ_T0007496.1 MGP_LPJ_G0006143.1 mouse_genomes_project 3 21320746 21373092 + 4930412E21Rik lincRNA lincRNA MGP_LPJ_T0063224.1 MGP_LPJ_G0027736.1 mouse_genomes_project 3 119707171 119873632 - MGP_LPJ_P0063224 Cdc14a protein_coding protein_coding MGP_LPJ_T0063225.1 MGP_LPJ_G0027736.1 mouse_genomes_project 3 119707171 119873586 - MGP_LPJ_P0063225 Cdc14a protein_coding protein_coding MGP_LPJ_T0063226.1 MGP_LPJ_G0027736.1 mouse_genomes_project 3 119757877 119872249 - MGP_LPJ_P0063226 Cdc14a protein_coding nonsense_mediated_decay MGP_LPJ_T0063227.1 MGP_LPJ_G0027736.1 mouse_genomes_project 3 119765458 119873632 - Cdc14a protein_coding retained_intron MGP_LPJ_T0063228.1 MGP_LPJ_G0027736.1 mouse_genomes_project 3 119847604 119872624 - Cdc14a protein_coding retained_intron MGP_LPJ_T0063229.1 MGP_LPJ_G0027736.1 mouse_genomes_project 3 119850806 119852908 - Cdc14a protein_coding retained_intron MGP_LPJ_T0063230.1 MGP_LPJ_G0027736.1 mouse_genomes_project 3 119851527 119873495 - Cdc14a protein_coding processed_transcript MGP_LPJ_T0061593.1 MGP_LPJ_G0027349.1 mouse_genomes_project 3 90349887 90368800 - MGP_LPJ_P0061593 Gm43738 protein_coding protein_coding MGP_LPJ_T0063041.1 MGP_LPJ_G0027696.1 mouse_genomes_project 3 111159252 111167965 - MGP_LPJ_P0063041 Atxn7l2 protein_coding protein_coding MGP_LPJ_T0063042.1 MGP_LPJ_G0027696.1 mouse_genomes_project 3 111159258 111165605 - Atxn7l2 protein_coding retained_intron MGP_LPJ_T0063043.1 MGP_LPJ_G0027696.1 mouse_genomes_project 3 111159389 111167472 - MGP_LPJ_P0063043 Atxn7l2 protein_coding protein_coding MGP_LPJ_T0063044.1 MGP_LPJ_G0027696.1 mouse_genomes_project 3 111164112 111166602 - MGP_LPJ_P0063044 Atxn7l2 protein_coding protein_coding MGP_LPJ_T0063045.1 MGP_LPJ_G0027696.1 mouse_genomes_project 3 111166006 111167499 - Atxn7l2 protein_coding processed_transcript MGP_LPJ_T0061046.1 MGP_LPJ_G0027233.1 mouse_genomes_project 3 69934567 69937044 + Nmd3 protein_coding retained_intron MGP_LPJ_T0061047.1 MGP_LPJ_G0027233.1 mouse_genomes_project 3 69934567 69969014 + MGP_LPJ_P0061047 Nmd3 protein_coding protein_coding MGP_LPJ_T0061048.1 MGP_LPJ_G0027233.1 mouse_genomes_project 3 69934614 69947646 + MGP_LPJ_P0061048 Nmd3 protein_coding nonsense_mediated_decay MGP_LPJ_T0061049.1 MGP_LPJ_G0027233.1 mouse_genomes_project 3 69934665 69943116 + MGP_LPJ_P0061049 Nmd3 protein_coding nonsense_mediated_decay MGP_LPJ_T0061050.1 MGP_LPJ_G0027233.1 mouse_genomes_project 3 69934672 69944557 + Nmd3 protein_coding retained_intron MGP_LPJ_T0061051.1 MGP_LPJ_G0027233.1 mouse_genomes_project 3 69934837 69938992 + MGP_LPJ_P0061051 Nmd3 protein_coding protein_coding MGP_LPJ_T0061052.1 MGP_LPJ_G0027233.1 mouse_genomes_project 3 69936818 69952568 + Nmd3 protein_coding retained_intron MGP_LPJ_T0061053.1 MGP_LPJ_G0027233.1 mouse_genomes_project 3 69958956 69961563 + Nmd3 protein_coding retained_intron MGP_LPJ_T0001292.1 MGP_LPJ_G0001212.1 mouse_genomes_project 3 91680644 91686101 + TEC TEC MGP_LPJ_T0063259.1 MGP_LPJ_G0027742.1 mouse_genomes_project 3 120082848 120116177 - MGP_LPJ_P0063259 Mfsd14a protein_coding protein_coding MGP_LPJ_T0063260.1 MGP_LPJ_G0027742.1 mouse_genomes_project 3 120084285 120088174 - Mfsd14a protein_coding retained_intron MGP_LPJ_T0063261.1 MGP_LPJ_G0027742.1 mouse_genomes_project 3 120093035 120097487 - Mfsd14a protein_coding retained_intron MGP_LPJ_T0063263.1 MGP_LPJ_G0027742.1 mouse_genomes_project 3 120099873 120115991 - Mfsd14a protein_coding retained_intron MGP_LPJ_T0063264.1 MGP_LPJ_G0027742.1 mouse_genomes_project 3 120102633 120116110 - Mfsd14a protein_coding retained_intron MGP_LPJ_T0060763.1 MGP_LPJ_G0027164.1 mouse_genomes_project 3 55231145 55233637 + MGP_LPJ_P0060763 Mab21l1 protein_coding protein_coding MGP_LPJ_T0059908.1 MGP_LPJ_G0026997.1 mouse_genomes_project 3 7667737 7671815 - MGP_LPJ_P0059908 Pmp2 protein_coding protein_coding MGP_LPJ_T0007588.1 MGP_LPJ_G0006213.1 mouse_genomes_project 3 73696614 73841615 + Gm38353 lincRNA lincRNA MGP_LPJ_T0014246.1 MGP_LPJ_G0012337.1 mouse_genomes_project 3 126667920 126668381 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010551.1 MGP_LPJ_G0008669.1 mouse_genomes_project 3 91408202 91408282 + Mir190b miRNA miRNA MGP_LPJ_T0014147.1 MGP_LPJ_G0012238.1 mouse_genomes_project 3 97454783 97455300 - processed_pseudogene processed_pseudogene MGP_LPJ_T0062874.1 MGP_LPJ_G0027651.1 mouse_genomes_project 3 108750783 108757368 + Wdr77 protein_coding retained_intron MGP_LPJ_T0062875.1 MGP_LPJ_G0027651.1 mouse_genomes_project 3 108750789 108761313 + MGP_LPJ_P0062875 Wdr77 protein_coding nonsense_mediated_decay MGP_LPJ_T0062876.1 MGP_LPJ_G0027651.1 mouse_genomes_project 3 108750859 108758598 + MGP_LPJ_P0062876 Wdr77 protein_coding protein_coding MGP_LPJ_T0062877.1 MGP_LPJ_G0027651.1 mouse_genomes_project 3 108755724 108756827 + Wdr77 protein_coding retained_intron MGP_LPJ_T0062446.1 MGP_LPJ_G0027555.1 mouse_genomes_project 3 98842624 98864167 + MGP_LPJ_P0062446 protein_coding nonsense_mediated_decay MGP_LPJ_T0062447.1 MGP_LPJ_G0027555.1 mouse_genomes_project 3 98842708 98864197 + MGP_LPJ_P0062447 protein_coding unknown_likely_coding MGP_LPJ_T0062448.1 MGP_LPJ_G0027555.1 mouse_genomes_project 3 98853240 98856373 + protein_coding processed_transcript MGP_LPJ_T0061010.1 MGP_LPJ_G0027226.1 mouse_genomes_project 3 69051987 69162455 - Ift80 protein_coding retained_intron MGP_LPJ_T0061011.1 MGP_LPJ_G0027226.1 mouse_genomes_project 3 69051987 69162439 - MGP_LPJ_P0061011 Ift80 protein_coding protein_coding MGP_LPJ_T0061012.1 MGP_LPJ_G0027226.1 mouse_genomes_project 3 69052013 69162466 - MGP_LPJ_P0061012 Ift80 protein_coding protein_coding MGP_LPJ_T0061013.1 MGP_LPJ_G0027226.1 mouse_genomes_project 3 69052013 69152479 - MGP_LPJ_P0061013 Ift80 protein_coding protein_coding MGP_LPJ_T0061014.1 MGP_LPJ_G0027226.1 mouse_genomes_project 3 69053133 69075153 - Ift80 protein_coding retained_intron MGP_LPJ_T0061015.1 MGP_LPJ_G0027226.1 mouse_genomes_project 3 69070223 69070573 - Ift80 protein_coding retained_intron MGP_LPJ_T0061016.1 MGP_LPJ_G0027226.1 mouse_genomes_project 3 69072902 69162394 - Ift80 protein_coding retained_intron MGP_LPJ_T0061017.1 MGP_LPJ_G0027226.1 mouse_genomes_project 3 69095721 69130636 - Ift80 protein_coding processed_transcript MGP_LPJ_T0061018.1 MGP_LPJ_G0027226.1 mouse_genomes_project 3 69120504 69162373 - MGP_LPJ_P0061018 Ift80 protein_coding protein_coding MGP_LPJ_T0061019.1 MGP_LPJ_G0027226.1 mouse_genomes_project 3 69124783 69162380 - MGP_LPJ_P0061019 Ift80 protein_coding protein_coding MGP_LPJ_T0061020.1 MGP_LPJ_G0027226.1 mouse_genomes_project 3 69130194 69162284 - Ift80 protein_coding processed_transcript MGP_LPJ_T0061021.1 MGP_LPJ_G0027226.1 mouse_genomes_project 3 69160190 69162421 - Ift80 protein_coding retained_intron MGP_LPJ_T0062100.1 MGP_LPJ_G0027485.1 mouse_genomes_project 3 96527532 96528185 + MGP_LPJ_P0062100 Gm10972 protein_coding protein_coding MGP_LPJ_T0061180.1 MGP_LPJ_G0027264.1 mouse_genomes_project 3 83341124 83351246 - MGP_LPJ_P0061180 Npy2r protein_coding protein_coding MGP_LPJ_T0061181.1 MGP_LPJ_G0027264.1 mouse_genomes_project 3 83341127 83351214 - MGP_LPJ_P0061181 Npy2r protein_coding protein_coding MGP_LPJ_T0061182.1 MGP_LPJ_G0027264.1 mouse_genomes_project 3 83342690 83351122 - MGP_LPJ_P0061182 Npy2r protein_coding protein_coding MGP_LPJ_T0061183.1 MGP_LPJ_G0027264.1 mouse_genomes_project 3 83342690 83351122 - MGP_LPJ_P0061183 Npy2r protein_coding protein_coding MGP_LPJ_T0014098.1 MGP_LPJ_G0012189.1 mouse_genomes_project 3 80259234 80259881 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099451.1 MGP_LPJ_G0037714.1 mouse_genomes_project 3 147413843 147413948 - Gm24457 snRNA snRNA MGP_LPJ_T0062652.1 MGP_LPJ_G0027608.1 mouse_genomes_project 3 105044843 105098228 + MGP_LPJ_P0062652 Ngf protein_coding protein_coding MGP_LPJ_T0062653.1 MGP_LPJ_G0027608.1 mouse_genomes_project 3 105044852 105087222 + MGP_LPJ_P0062653 Ngf protein_coding protein_coding MGP_LPJ_T0062654.1 MGP_LPJ_G0027608.1 mouse_genomes_project 3 105044852 105098393 + MGP_LPJ_P0062654 Ngf protein_coding protein_coding MGP_LPJ_T0062655.1 MGP_LPJ_G0027608.1 mouse_genomes_project 3 105063685 105098375 + MGP_LPJ_P0062655 Ngf protein_coding protein_coding MGP_LPJ_T0061190.1 MGP_LPJ_G0027268.1 mouse_genomes_project 3 83836863 83843029 + MGP_LPJ_P0061190 Fga protein_coding protein_coding MGP_LPJ_T0061191.1 MGP_LPJ_G0027268.1 mouse_genomes_project 3 83837002 83844392 + MGP_LPJ_P0061191 Fga protein_coding protein_coding MGP_LPJ_T0060172.1 MGP_LPJ_G0027058.1 mouse_genomes_project 3 28772741 28775608 - MGP_LPJ_P0060172 Actrt3 protein_coding protein_coding MGP_LPJ_T0060106.1 MGP_LPJ_G0027050.1 mouse_genomes_project 3 25894468 25925748 - MGP_LPJ_P0060106 Tmem212 protein_coding protein_coding MGP_LPJ_T0063857.1 MGP_LPJ_G0027851.1 mouse_genomes_project 3 142610170 142628568 - MGP_LPJ_P0063857 4930579F01Rik protein_coding protein_coding MGP_LPJ_T0063858.1 MGP_LPJ_G0027851.1 mouse_genomes_project 3 142610227 142628608 - MGP_LPJ_P0063858 4930579F01Rik protein_coding protein_coding MGP_LPJ_T0063859.1 MGP_LPJ_G0027851.1 mouse_genomes_project 3 142623840 142635699 - 4930579F01Rik protein_coding processed_transcript MGP_LPJ_T0062594.1 MGP_LPJ_G0027593.1 mouse_genomes_project 3 102920465 102959070 - Fam46c protein_coding processed_transcript MGP_LPJ_T0062595.1 MGP_LPJ_G0027593.1 mouse_genomes_project 3 102920468 102959066 - Fam46c protein_coding processed_transcript MGP_LPJ_T0062596.1 MGP_LPJ_G0027593.1 mouse_genomes_project 3 102938056 102959196 - MGP_LPJ_P0062596 Fam46c protein_coding protein_coding MGP_LPJ_T0014276.1 MGP_LPJ_G0012367.1 mouse_genomes_project 3 138477055 138477496 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007757.1 MGP_LPJ_G0006347.1 mouse_genomes_project 3 148287509 148308936 + Gm42703 lincRNA lincRNA MGP_LPJ_T0013968.1 MGP_LPJ_G0012059.1 mouse_genomes_project 3 39544179 39544450 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014007.1 MGP_LPJ_G0012098.1 mouse_genomes_project 3 53390265 53390673 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001152.1 MGP_LPJ_G0001074.1 mouse_genomes_project 3 18688850 18692911 + TEC TEC MGP_LPJ_T0014291.1 MGP_LPJ_G0012382.1 mouse_genomes_project 3 139824324 139824555 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013971.1 MGP_LPJ_G0012062.1 mouse_genomes_project 3 41149806 41149954 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007506.1 MGP_LPJ_G0006152.1 mouse_genomes_project 3 32737946 32793829 - Gm38505 lincRNA lincRNA MGP_LPJ_T0098585.1 MGP_LPJ_G0036859.1 mouse_genomes_project 3 108509831 108511265 - Gm43328 sense_intronic sense_intronic MGP_LPJ_T0007762.1 MGP_LPJ_G0006351.1 mouse_genomes_project 3 148463302 148465212 + Gm42706 lincRNA lincRNA MGP_LPJ_T0007529.1 MGP_LPJ_G0006170.1 mouse_genomes_project 3 36887823 36892748 - 5430434I15Rik lincRNA lincRNA MGP_LPJ_T0063533.1 MGP_LPJ_G0027788.1 mouse_genomes_project 3 131595573 131667028 + MGP_LPJ_P0063533 Zgrf1 protein_coding protein_coding MGP_LPJ_T0063534.1 MGP_LPJ_G0027788.1 mouse_genomes_project 3 131595573 131667023 + MGP_LPJ_P0063534 Zgrf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0063535.1 MGP_LPJ_G0027788.1 mouse_genomes_project 3 131595586 131667031 + MGP_LPJ_P0063535 Zgrf1 protein_coding protein_coding MGP_LPJ_T0063536.1 MGP_LPJ_G0027788.1 mouse_genomes_project 3 131595586 131666140 + MGP_LPJ_P0063536 Zgrf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0063537.1 MGP_LPJ_G0027788.1 mouse_genomes_project 3 131595717 131606510 + MGP_LPJ_P0063537 Zgrf1 protein_coding protein_coding MGP_LPJ_T0063538.1 MGP_LPJ_G0027788.1 mouse_genomes_project 3 131598168 131665809 + MGP_LPJ_P0063538 Zgrf1 protein_coding unknown_likely_coding MGP_LPJ_T0063539.1 MGP_LPJ_G0027788.1 mouse_genomes_project 3 131627560 131665991 + MGP_LPJ_P0063539 Zgrf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0060825.1 MGP_LPJ_G0027180.1 mouse_genomes_project 3 58728916 58734290 - MGP_LPJ_P0060825 Gpr171 protein_coding protein_coding MGP_LPJ_T0007714.1 MGP_LPJ_G0006309.1 mouse_genomes_project 3 134959502 134960488 + Gm42997 lincRNA lincRNA MGP_LPJ_T0007715.1 MGP_LPJ_G0006309.1 mouse_genomes_project 3 134959643 135007430 + Gm42997 lincRNA lincRNA MGP_LPJ_T0007593.1 MGP_LPJ_G0006217.1 mouse_genomes_project 3 76243862 76274769 + lincRNA lincRNA MGP_LPJ_T0098712.1 MGP_LPJ_G0036976.1 mouse_genomes_project 3 159997270 160021816 + Gm38139 sense_overlapping sense_overlapping MGP_LPJ_T0062755.1 MGP_LPJ_G0027626.1 mouse_genomes_project 3 106440968 106473744 + MGP_LPJ_P0062755 protein_coding nonsense_mediated_decay MGP_LPJ_T0063007.1 MGP_LPJ_G0027688.1 mouse_genomes_project 3 110961018 110967532 - MGP_LPJ_P0063007 Gstm1 protein_coding unknown_likely_coding MGP_LPJ_T0063008.1 MGP_LPJ_G0027688.1 mouse_genomes_project 3 110961023 110967730 - MGP_LPJ_P0063008 Gstm1 protein_coding protein_coding MGP_LPJ_T0063009.1 MGP_LPJ_G0027688.1 mouse_genomes_project 3 110961029 110962085 - Gstm1 protein_coding processed_transcript MGP_LPJ_T0063010.1 MGP_LPJ_G0027688.1 mouse_genomes_project 3 110961159 110966357 - MGP_LPJ_P0063010 Gstm1 protein_coding protein_coding MGP_LPJ_T0063011.1 MGP_LPJ_G0027688.1 mouse_genomes_project 3 110961395 110967563 - MGP_LPJ_P0063011 Gstm1 protein_coding protein_coding MGP_LPJ_T0001198.1 MGP_LPJ_G0001120.1 mouse_genomes_project 3 40546069 40548665 + TEC TEC MGP_LPJ_T0014114.1 MGP_LPJ_G0012205.1 mouse_genomes_project 3 88080653 88081182 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014271.1 MGP_LPJ_G0012362.1 mouse_genomes_project 3 135636854 135637049 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102098.1 MGP_LPJ_G0040135.1 mouse_genomes_project 3 89536448 89540317 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0001256.1 MGP_LPJ_G0001176.1 mouse_genomes_project 3 57197932 57199108 - TEC TEC MGP_LPJ_T0017924.1 MGP_LPJ_G0015430.1 mouse_genomes_project 3 106432320 106437644 + Gm15471 processed_transcript retained_intron MGP_LPJ_T0017925.1 MGP_LPJ_G0015430.1 mouse_genomes_project 3 106432327 106437645 + Gm15471 processed_transcript antisense MGP_LPJ_T0061054.1 MGP_LPJ_G0027234.1 mouse_genomes_project 3 70039197 70074391 - MGP_LPJ_P0061054 Sptssb protein_coding protein_coding MGP_LPJ_T0061055.1 MGP_LPJ_G0027234.1 mouse_genomes_project 3 70040233 70074373 - MGP_LPJ_P0061055 Sptssb protein_coding protein_coding MGP_LPJ_T0001168.1 MGP_LPJ_G0001090.1 mouse_genomes_project 3 30741260 30742659 - TEC TEC MGP_LPJ_T0013918.1 MGP_LPJ_G0012009.1 mouse_genomes_project 3 18671268 18672880 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013969.1 MGP_LPJ_G0012060.1 mouse_genomes_project 3 39624276 39624724 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060666.1 MGP_LPJ_G0027147.1 mouse_genomes_project 3 53210403 53216271 - Ufm1 protein_coding retained_intron MGP_LPJ_T0060667.1 MGP_LPJ_G0027147.1 mouse_genomes_project 3 53210509 53216856 - MGP_LPJ_P0060667 Ufm1 protein_coding protein_coding MGP_LPJ_T0060668.1 MGP_LPJ_G0027147.1 mouse_genomes_project 3 53210524 53216344 - MGP_LPJ_P0060668 Ufm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0060669.1 MGP_LPJ_G0027147.1 mouse_genomes_project 3 53211392 53216348 - MGP_LPJ_P0060669 Ufm1 protein_coding protein_coding MGP_LPJ_T0060670.1 MGP_LPJ_G0027147.1 mouse_genomes_project 3 53212197 53216344 - Ufm1 protein_coding retained_intron MGP_LPJ_T0001382.1 MGP_LPJ_G0001301.1 mouse_genomes_project 3 135401720 135403973 + TEC TEC MGP_LPJ_T0014033.1 MGP_LPJ_G0012124.1 mouse_genomes_project 3 60663235 60663614 + processed_pseudogene processed_pseudogene MGP_LPJ_T0063846.1 MGP_LPJ_G0027848.1 mouse_genomes_project 3 142507623 142524067 + MGP_LPJ_P0063846 1110002E22Rik protein_coding protein_coding MGP_LPJ_T0063847.1 MGP_LPJ_G0027848.1 mouse_genomes_project 3 142514175 142519934 + 1110002E22Rik protein_coding processed_transcript MGP_LPJ_T0060475.1 MGP_LPJ_G0027115.1 mouse_genomes_project 3 39326126 39351514 + MGP_LPJ_P0060475 Intu protein_coding protein_coding MGP_LPJ_T0060476.1 MGP_LPJ_G0027115.1 mouse_genomes_project 3 39337072 39407807 + MGP_LPJ_P0060476 Intu protein_coding protein_coding MGP_LPJ_T0060477.1 MGP_LPJ_G0027115.1 mouse_genomes_project 3 39374456 39394999 + MGP_LPJ_P0060477 Intu protein_coding protein_coding MGP_LPJ_T0014235.1 MGP_LPJ_G0012326.1 mouse_genomes_project 3 123410767 123410945 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001272.1 MGP_LPJ_G0001192.1 mouse_genomes_project 3 69278448 69281431 - TEC TEC MGP_LPJ_T0001248.1 MGP_LPJ_G0001168.1 mouse_genomes_project 3 54937208 54940601 + TEC TEC MGP_LPJ_T0098251.1 MGP_LPJ_G0036532.1 mouse_genomes_project 3 98657239 98657356 + Gm28001 rRNA rRNA MGP_LPJ_T0099385.1 MGP_LPJ_G0037648.1 mouse_genomes_project 3 44929086 44929204 + Gm23337 snRNA snRNA MGP_LPJ_T0062316.1 MGP_LPJ_G0027522.1 mouse_genomes_project 3 97820502 97831480 - Tars2 protein_coding retained_intron MGP_LPJ_T0062317.1 MGP_LPJ_G0027522.1 mouse_genomes_project 3 97820502 97835300 - MGP_LPJ_P0062317 Tars2 protein_coding nonsense_mediated_decay MGP_LPJ_T0062318.1 MGP_LPJ_G0027522.1 mouse_genomes_project 3 97820502 97835327 - MGP_LPJ_P0062318 Tars2 protein_coding protein_coding MGP_LPJ_T0062319.1 MGP_LPJ_G0027522.1 mouse_genomes_project 3 97820502 97835316 - MGP_LPJ_P0062319 Tars2 protein_coding nonsense_mediated_decay MGP_LPJ_T0062320.1 MGP_LPJ_G0027522.1 mouse_genomes_project 3 97820502 97835336 - MGP_LPJ_P0062320 Tars2 protein_coding protein_coding MGP_LPJ_T0062321.1 MGP_LPJ_G0027522.1 mouse_genomes_project 3 97820502 97835336 - MGP_LPJ_P0062321 Tars2 protein_coding protein_coding MGP_LPJ_T0062322.1 MGP_LPJ_G0027522.1 mouse_genomes_project 3 97820545 97822673 - Tars2 protein_coding processed_transcript MGP_LPJ_T0062323.1 MGP_LPJ_G0027522.1 mouse_genomes_project 3 97824379 97835348 - MGP_LPJ_P0062323 Tars2 protein_coding protein_coding MGP_LPJ_T0062324.1 MGP_LPJ_G0027522.1 mouse_genomes_project 3 97826311 97829060 - Tars2 protein_coding processed_transcript MGP_LPJ_T0062325.1 MGP_LPJ_G0027522.1 mouse_genomes_project 3 97828042 97835336 - MGP_LPJ_P0062325 Tars2 protein_coding protein_coding MGP_LPJ_T0062326.1 MGP_LPJ_G0027522.1 mouse_genomes_project 3 97828076 97835303 - MGP_LPJ_P0062326 Tars2 protein_coding protein_coding MGP_LPJ_T0062327.1 MGP_LPJ_G0027522.1 mouse_genomes_project 3 97829079 97835336 - MGP_LPJ_P0062327 Tars2 protein_coding protein_coding MGP_LPJ_T0062328.1 MGP_LPJ_G0027522.1 mouse_genomes_project 3 97829102 97834820 - Tars2 protein_coding processed_transcript MGP_LPJ_T0062329.1 MGP_LPJ_G0027522.1 mouse_genomes_project 3 97829104 97835314 - MGP_LPJ_P0062329 Tars2 protein_coding protein_coding MGP_LPJ_T0062330.1 MGP_LPJ_G0027522.1 mouse_genomes_project 3 97830740 97831480 - Tars2 protein_coding retained_intron MGP_LPJ_T0062331.1 MGP_LPJ_G0027522.1 mouse_genomes_project 3 97830866 97835282 - Tars2 protein_coding processed_transcript MGP_LPJ_T0062332.1 MGP_LPJ_G0027522.1 mouse_genomes_project 3 97831201 97834937 - Tars2 protein_coding retained_intron MGP_LPJ_T0062333.1 MGP_LPJ_G0027522.1 mouse_genomes_project 3 97831265 97835314 - MGP_LPJ_P0062333 Tars2 protein_coding nonsense_mediated_decay MGP_LPJ_T0062334.1 MGP_LPJ_G0027522.1 mouse_genomes_project 3 97835270 97840794 - MGP_LPJ_P0062334 Tars2 protein_coding protein_coding MGP_LPJ_T0098244.1 MGP_LPJ_G0036525.1 mouse_genomes_project 3 7289758 7289867 - Gm24786 rRNA rRNA MGP_LPJ_T0062032.1 MGP_LPJ_G0027466.1 mouse_genomes_project 3 94998632 95003149 + Flg protein_coding TEC MGP_LPJ_T0062033.1 MGP_LPJ_G0027466.1 mouse_genomes_project 3 94998650 95005417 + MGP_LPJ_P0062033 Flg protein_coding protein_coding MGP_LPJ_T0062034.1 MGP_LPJ_G0027466.1 mouse_genomes_project 3 95002671 95005417 + MGP_LPJ_P0062034 Flg protein_coding protein_coding MGP_LPJ_T0061409.1 MGP_LPJ_G0027319.1 mouse_genomes_project 3 89254696 89285206 + MGP_LPJ_P0061409 Mef2d protein_coding protein_coding MGP_LPJ_T0061410.1 MGP_LPJ_G0027319.1 mouse_genomes_project 3 89254740 89283050 + MGP_LPJ_P0061410 Mef2d protein_coding protein_coding MGP_LPJ_T0061411.1 MGP_LPJ_G0027319.1 mouse_genomes_project 3 89254896 89281775 + MGP_LPJ_P0061411 Mef2d protein_coding protein_coding MGP_LPJ_T0061412.1 MGP_LPJ_G0027319.1 mouse_genomes_project 3 89254896 89281775 + MGP_LPJ_P0061412 Mef2d protein_coding protein_coding MGP_LPJ_T0061413.1 MGP_LPJ_G0027319.1 mouse_genomes_project 3 89254898 89269089 + Mef2d protein_coding retained_intron MGP_LPJ_T0061414.1 MGP_LPJ_G0027319.1 mouse_genomes_project 3 89276047 89281905 + Mef2d protein_coding processed_transcript MGP_LPJ_T0061415.1 MGP_LPJ_G0027319.1 mouse_genomes_project 3 89281371 89282026 + Mef2d protein_coding processed_transcript MGP_LPJ_T0098415.1 MGP_LPJ_G0036696.1 mouse_genomes_project 3 63014956 63015098 + Gm22433 scaRNA scaRNA MGP_LPJ_T0014256.1 MGP_LPJ_G0012347.1 mouse_genomes_project 3 130221306 130222552 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062113.1 MGP_LPJ_G0027489.1 mouse_genomes_project 3 96778004 96823120 + MGP_LPJ_P0062113 Pogz protein_coding protein_coding MGP_LPJ_T0062114.1 MGP_LPJ_G0027489.1 mouse_genomes_project 3 96778134 96802400 + Pogz protein_coding processed_transcript MGP_LPJ_T0062115.1 MGP_LPJ_G0027489.1 mouse_genomes_project 3 96778150 96807327 + Pogz protein_coding retained_intron MGP_LPJ_T0062116.1 MGP_LPJ_G0027489.1 mouse_genomes_project 3 96778150 96823118 + MGP_LPJ_P0062116 Pogz protein_coding protein_coding MGP_LPJ_T0062117.1 MGP_LPJ_G0027489.1 mouse_genomes_project 3 96778150 96821126 + MGP_LPJ_P0062117 Pogz protein_coding protein_coding MGP_LPJ_T0062118.1 MGP_LPJ_G0027489.1 mouse_genomes_project 3 96778150 96821669 + MGP_LPJ_P0062118 Pogz protein_coding protein_coding MGP_LPJ_T0062119.1 MGP_LPJ_G0027489.1 mouse_genomes_project 3 96804534 96805357 + Pogz protein_coding retained_intron MGP_LPJ_T0062120.1 MGP_LPJ_G0027489.1 mouse_genomes_project 3 96805325 96813094 + MGP_LPJ_P0062120 Pogz protein_coding nonsense_mediated_decay MGP_LPJ_T0062121.1 MGP_LPJ_G0027489.1 mouse_genomes_project 3 96812103 96814501 + Pogz protein_coding processed_transcript MGP_LPJ_T0062122.1 MGP_LPJ_G0027489.1 mouse_genomes_project 3 96818448 96819760 + Pogz protein_coding retained_intron MGP_LPJ_T0007759.1 MGP_LPJ_G0006349.1 mouse_genomes_project 3 148360144 148402359 - Gm6260 lincRNA lincRNA MGP_LPJ_T0007760.1 MGP_LPJ_G0006349.1 mouse_genomes_project 3 148382693 148402426 - Gm6260 lincRNA lincRNA MGP_LPJ_T0001368.1 MGP_LPJ_G0001288.1 mouse_genomes_project 3 131893115 131896524 - TEC TEC MGP_LPJ_T0004257.1 MGP_LPJ_G0003747.1 mouse_genomes_project 3 51543122 51544123 - Gm20402 antisense antisense MGP_LPJ_T0007654.1 MGP_LPJ_G0006262.1 mouse_genomes_project 3 103178653 103187128 + Gm43464 lincRNA lincRNA MGP_LPJ_T0061091.1 MGP_LPJ_G0027245.1 mouse_genomes_project 3 76576883 77252090 + MGP_LPJ_P0061091 protein_coding protein_coding MGP_LPJ_T0061092.1 MGP_LPJ_G0027245.1 mouse_genomes_project 3 76577172 77079130 + protein_coding processed_transcript MGP_LPJ_T0061093.1 MGP_LPJ_G0027245.1 mouse_genomes_project 3 76578196 77250708 + MGP_LPJ_P0061093 protein_coding protein_coding MGP_LPJ_T0061094.1 MGP_LPJ_G0027245.1 mouse_genomes_project 3 77122095 77125363 + protein_coding retained_intron MGP_LPJ_T0061095.1 MGP_LPJ_G0027245.1 mouse_genomes_project 3 77129911 77249622 + MGP_LPJ_P0061095 protein_coding protein_coding MGP_LPJ_T0007640.1 MGP_LPJ_G0006249.1 mouse_genomes_project 3 98407267 98413395 + Gm42743 lincRNA lincRNA MGP_LPJ_T0013871.1 MGP_LPJ_G0011962.1 mouse_genomes_project 3 6253895 6254228 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013921.1 MGP_LPJ_G0012012.1 mouse_genomes_project 3 19498736 19499508 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007559.1 MGP_LPJ_G0006191.1 mouse_genomes_project 3 52043669 52080720 + Gm2447 lincRNA lincRNA MGP_LPJ_T0007560.1 MGP_LPJ_G0006191.1 mouse_genomes_project 3 52068300 52080718 + Gm2447 lincRNA lincRNA MGP_LPJ_T0060575.1 MGP_LPJ_G0027128.1 mouse_genomes_project 3 45407032 45413044 - MGP_LPJ_P0060575 Pabpc4l protein_coding protein_coding MGP_LPJ_T0060576.1 MGP_LPJ_G0027128.1 mouse_genomes_project 3 45407032 45412766 - MGP_LPJ_P0060576 Pabpc4l protein_coding protein_coding MGP_LPJ_T0060577.1 MGP_LPJ_G0027128.1 mouse_genomes_project 3 45411516 45412766 - MGP_LPJ_P0060577 Pabpc4l protein_coding protein_coding MGP_LPJ_T0060578.1 MGP_LPJ_G0027128.1 mouse_genomes_project 3 45411880 45412745 - MGP_LPJ_P0060578 Pabpc4l protein_coding protein_coding MGP_LPJ_T0004265.1 MGP_LPJ_G0003753.1 mouse_genomes_project 3 55344206 55390806 + Gm43376 antisense antisense MGP_LPJ_T0004266.1 MGP_LPJ_G0003753.1 mouse_genomes_project 3 55344277 55346164 + Gm43376 antisense antisense MGP_LPJ_T0014307.1 MGP_LPJ_G0012398.1 mouse_genomes_project 3 143899151 143899595 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014051.1 MGP_LPJ_G0012142.1 mouse_genomes_project 3 66193092 66193848 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060740.1 MGP_LPJ_G0027160.1 mouse_genomes_project 3 54623935 54649056 + MGP_LPJ_P0060740 Sohlh2 protein_coding protein_coding MGP_LPJ_T0007739.1 MGP_LPJ_G0006331.1 mouse_genomes_project 3 142351693 142352136 - Gm43689 lincRNA lincRNA MGP_LPJ_T0001250.1 MGP_LPJ_G0001170.1 mouse_genomes_project 3 55031881 55034234 + TEC TEC MGP_LPJ_T0001189.1 MGP_LPJ_G0001111.1 mouse_genomes_project 3 36363926 36366968 + TEC TEC MGP_LPJ_T0013979.1 MGP_LPJ_G0012070.1 mouse_genomes_project 3 44262687 44262937 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001142.1 MGP_LPJ_G0001064.1 mouse_genomes_project 3 6927530 6931291 + TEC TEC MGP_LPJ_T0063002.1 MGP_LPJ_G0027686.1 mouse_genomes_project 3 110910289 110917149 - MGP_LPJ_P0063002 Gstm3 protein_coding protein_coding MGP_LPJ_T0064093.1 MGP_LPJ_G0027903.1 mouse_genomes_project 3 151491089 151527798 - MGP_LPJ_P0064093 Dnase2b protein_coding protein_coding MGP_LPJ_T0064094.1 MGP_LPJ_G0027903.1 mouse_genomes_project 3 151491089 151508846 - MGP_LPJ_P0064094 Dnase2b protein_coding protein_coding MGP_LPJ_T0061401.1 MGP_LPJ_G0027317.1 mouse_genomes_project 3 89174944 89184893 - MGP_LPJ_P0061401 Ttc24 protein_coding protein_coding MGP_LPJ_T0061402.1 MGP_LPJ_G0027317.1 mouse_genomes_project 3 89175347 89177595 - MGP_LPJ_P0061402 Ttc24 protein_coding protein_coding MGP_LPJ_T0014059.1 MGP_LPJ_G0012150.1 mouse_genomes_project 3 68466743 68467328 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014277.1 MGP_LPJ_G0012368.1 mouse_genomes_project 3 138571610 138572076 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013883.1 MGP_LPJ_G0011974.1 mouse_genomes_project 3 8571393 8571582 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102100.1 MGP_LPJ_G0040137.1 mouse_genomes_project 3 89646482 89647053 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0061009.1 MGP_LPJ_G0027225.1 mouse_genomes_project 3 69027520 69030098 + MGP_LPJ_P0061009 1110032F04Rik protein_coding protein_coding MGP_LPJ_T0063589.1 MGP_LPJ_G0027798.1 mouse_genomes_project 3 133974142 133991720 - MGP_LPJ_P0063589 Lrit3 protein_coding protein_coding MGP_LPJ_T0063590.1 MGP_LPJ_G0027798.1 mouse_genomes_project 3 133974552 133991720 - MGP_LPJ_P0063590 Lrit3 protein_coding protein_coding MGP_LPJ_T0063591.1 MGP_LPJ_G0027798.1 mouse_genomes_project 3 133978143 133988211 - Lrit3 protein_coding retained_intron MGP_LPJ_T0007773.1 MGP_LPJ_G0006360.1 mouse_genomes_project 3 152032513 152061532 + Gm29771 lincRNA lincRNA MGP_LPJ_T0007661.1 MGP_LPJ_G0006267.1 mouse_genomes_project 3 104954412 104956194 + Gm43242 lincRNA lincRNA MGP_LPJ_T0060432.1 MGP_LPJ_G0027105.1 mouse_genomes_project 3 35845555 35856641 - MGP_LPJ_P0060432 Il21 protein_coding protein_coding MGP_LPJ_T0060433.1 MGP_LPJ_G0027105.1 mouse_genomes_project 3 35849334 35856588 - MGP_LPJ_P0060433 Il21 protein_coding protein_coding MGP_LPJ_T0060434.1 MGP_LPJ_G0027105.1 mouse_genomes_project 3 35854292 35856659 - Il21 protein_coding retained_intron MGP_LPJ_T0001277.1 MGP_LPJ_G0001197.1 mouse_genomes_project 3 76183144 76183657 - TEC TEC MGP_LPJ_T0007477.1 MGP_LPJ_G0006131.1 mouse_genomes_project 3 15105616 15112674 - Gm30340 lincRNA lincRNA MGP_LPJ_T0062014.1 MGP_LPJ_G0027453.1 mouse_genomes_project 3 94505573 94509789 - MGP_LPJ_P0062014 Kprp protein_coding protein_coding MGP_LPJ_T0011547.1 MGP_LPJ_G0009665.1 mouse_genomes_project 3 22617242 22617508 + Gm24062 misc_RNA misc_RNA MGP_LPJ_T0013890.1 MGP_LPJ_G0011981.1 mouse_genomes_project 3 11396391 11396949 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007734.1 MGP_LPJ_G0006326.1 mouse_genomes_project 3 141345015 141348323 - Gm43357 lincRNA lincRNA MGP_LPJ_T0014236.1 MGP_LPJ_G0012327.1 mouse_genomes_project 3 123639190 123639998 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062802.1 MGP_LPJ_G0027633.1 mouse_genomes_project 3 107316459 107337875 + MGP_LPJ_P0062802 Slc16a1 protein_coding protein_coding MGP_LPJ_T0060641.1 MGP_LPJ_G0027141.1 mouse_genomes_project 3 52292256 52331543 - MGP_LPJ_P0060641 Cog6 protein_coding protein_coding MGP_LPJ_T0060642.1 MGP_LPJ_G0027141.1 mouse_genomes_project 3 52292503 52309024 - Cog6 protein_coding retained_intron MGP_LPJ_T0060643.1 MGP_LPJ_G0027141.1 mouse_genomes_project 3 52295097 52331522 - MGP_LPJ_P0060643 Cog6 protein_coding protein_coding MGP_LPJ_T0060644.1 MGP_LPJ_G0027141.1 mouse_genomes_project 3 52307200 52331524 - MGP_LPJ_P0060644 Cog6 protein_coding protein_coding MGP_LPJ_T0060645.1 MGP_LPJ_G0027141.1 mouse_genomes_project 3 52310121 52331516 - Cog6 protein_coding retained_intron MGP_LPJ_T0060646.1 MGP_LPJ_G0027141.1 mouse_genomes_project 3 52324663 52331518 - Cog6 protein_coding retained_intron MGP_LPJ_T0102095.1 MGP_LPJ_G0040132.1 mouse_genomes_project 3 81772173 81772641 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0099390.1 MGP_LPJ_G0037653.1 mouse_genomes_project 3 54746922 54747029 + Gm25132 snRNA snRNA MGP_LPJ_T0013874.1 MGP_LPJ_G0011965.1 mouse_genomes_project 3 7104356 7104739 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102078.1 MGP_LPJ_G0040115.1 mouse_genomes_project 3 12052177 12067203 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0004383.1 MGP_LPJ_G0003830.1 mouse_genomes_project 3 126670965 126732933 - 4933405D12Rik antisense antisense MGP_LPJ_T0004418.1 MGP_LPJ_G0003855.1 mouse_genomes_project 3 149507549 149544071 + antisense antisense MGP_LPJ_T0013955.1 MGP_LPJ_G0012046.1 mouse_genomes_project 3 35421644 35422251 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010574.1 MGP_LPJ_G0008692.1 mouse_genomes_project 3 131586528 131586594 + Mir367 miRNA miRNA MGP_LPJ_T0001253.1 MGP_LPJ_G0001173.1 mouse_genomes_project 3 55588467 55591159 - TEC TEC MGP_LPJ_T0060851.1 MGP_LPJ_G0027188.1 mouse_genomes_project 3 59708934 59727782 + MGP_LPJ_P0060851 Aadacl2 protein_coding protein_coding MGP_LPJ_T0004254.1 MGP_LPJ_G0003744.1 mouse_genomes_project 3 49213587 49222371 + Gm37854 antisense antisense MGP_LPJ_T0001363.1 MGP_LPJ_G0001283.1 mouse_genomes_project 3 131239742 131242942 - TEC TEC MGP_LPJ_T0063174.1 MGP_LPJ_G0027724.1 mouse_genomes_project 3 116547641 116645726 - MGP_LPJ_P0063174 protein_coding protein_coding MGP_LPJ_T0062669.1 MGP_LPJ_G0027612.1 mouse_genomes_project 3 105519550 105543758 - MGP_LPJ_P0062669 Nr1h5 protein_coding protein_coding MGP_LPJ_T0062670.1 MGP_LPJ_G0027612.1 mouse_genomes_project 3 105520759 105538147 - MGP_LPJ_P0062670 Nr1h5 protein_coding protein_coding MGP_LPJ_T0062671.1 MGP_LPJ_G0027612.1 mouse_genomes_project 3 105520759 105538147 - MGP_LPJ_P0062671 Nr1h5 protein_coding nonsense_mediated_decay MGP_LPJ_T0062672.1 MGP_LPJ_G0027612.1 mouse_genomes_project 3 105520759 105538147 - MGP_LPJ_P0062672 Nr1h5 protein_coding protein_coding MGP_LPJ_T0062673.1 MGP_LPJ_G0027612.1 mouse_genomes_project 3 105520759 105538147 - MGP_LPJ_P0062673 Nr1h5 protein_coding nonsense_mediated_decay MGP_LPJ_T0061199.1 MGP_LPJ_G0027272.1 mouse_genomes_project 3 84594755 84602748 + MGP_LPJ_P0061199 Sfrp2 protein_coding protein_coding MGP_LPJ_T0061200.1 MGP_LPJ_G0027272.1 mouse_genomes_project 3 84594999 84598564 + Sfrp2 protein_coding processed_transcript MGP_LPJ_T0061201.1 MGP_LPJ_G0027272.1 mouse_genomes_project 3 84595287 84600578 + Sfrp2 protein_coding processed_transcript MGP_LPJ_T0007524.1 MGP_LPJ_G0006166.1 mouse_genomes_project 3 36262385 36263750 + 4930594O21Rik lincRNA lincRNA MGP_LPJ_T0007525.1 MGP_LPJ_G0006166.1 mouse_genomes_project 3 36262395 36263300 + 4930594O21Rik lincRNA lincRNA MGP_LPJ_T0001197.1 MGP_LPJ_G0001119.1 mouse_genomes_project 3 39744704 39745627 - TEC TEC MGP_LPJ_T0004248.1 MGP_LPJ_G0003738.1 mouse_genomes_project 3 35855327 35856492 + Gm12534 antisense antisense MGP_LPJ_T0061683.1 MGP_LPJ_G0027361.1 mouse_genomes_project 3 90516300 90529116 - MGP_LPJ_P0061683 Trim46 protein_coding protein_coding MGP_LPJ_T0061684.1 MGP_LPJ_G0027361.1 mouse_genomes_project 3 90516305 90529225 - MGP_LPJ_P0061684 Trim46 protein_coding protein_coding MGP_LPJ_T0061685.1 MGP_LPJ_G0027361.1 mouse_genomes_project 3 90516963 90521474 - Trim46 protein_coding processed_transcript MGP_LPJ_T0061686.1 MGP_LPJ_G0027361.1 mouse_genomes_project 3 90516996 90529200 - MGP_LPJ_P0061686 Trim46 protein_coding nonsense_mediated_decay MGP_LPJ_T0061687.1 MGP_LPJ_G0027361.1 mouse_genomes_project 3 90526455 90529637 - MGP_LPJ_P0061687 Trim46 protein_coding protein_coding MGP_LPJ_T0014299.1 MGP_LPJ_G0012390.1 mouse_genomes_project 3 142071139 142071863 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100659.1 MGP_LPJ_G0038922.1 mouse_genomes_project 3 31802176 31802319 - Gm24780 snoRNA snoRNA MGP_LPJ_T0007743.1 MGP_LPJ_G0006335.1 mouse_genomes_project 3 145352900 145353277 - lincRNA lincRNA MGP_LPJ_T0004235.1 MGP_LPJ_G0003730.1 mouse_genomes_project 3 30992149 30994788 + Gm37640 antisense antisense MGP_LPJ_T0007475.1 MGP_LPJ_G0006129.1 mouse_genomes_project 3 12721606 12748922 + A930001A20Rik lincRNA lincRNA MGP_LPJ_T0010583.1 MGP_LPJ_G0008701.1 mouse_genomes_project 3 147260421 147260508 - Mir6381 miRNA miRNA MGP_LPJ_T0011830.1 MGP_LPJ_G0009938.1 mouse_genomes_project 3 94035531 94036846 + MGP_LPJ_P0011830 Sprr2g polymorphic_pseudogene protein_coding MGP_LPJ_T0061222.1 MGP_LPJ_G0027277.1 mouse_genomes_project 3 85049088 85050116 + MGP_LPJ_P0061222 Gm6525 protein_coding protein_coding MGP_LPJ_T0010539.1 MGP_LPJ_G0008657.1 mouse_genomes_project 3 73515840 73515950 + Gm24544 miRNA miRNA MGP_LPJ_T0014023.1 MGP_LPJ_G0012114.1 mouse_genomes_project 3 58279864 58280829 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014313.1 MGP_LPJ_G0012404.1 mouse_genomes_project 3 145456812 145457176 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060534.1 MGP_LPJ_G0027124.1 mouse_genomes_project 3 40306136 40375127 + MGP_LPJ_P0060534 Jade1 protein_coding protein_coding MGP_LPJ_T0060535.1 MGP_LPJ_G0027124.1 mouse_genomes_project 3 40306146 40346771 + MGP_LPJ_P0060535 Jade1 protein_coding protein_coding MGP_LPJ_T0060536.1 MGP_LPJ_G0027124.1 mouse_genomes_project 3 40306165 40349580 + MGP_LPJ_P0060536 Jade1 protein_coding protein_coding MGP_LPJ_T0060537.1 MGP_LPJ_G0027124.1 mouse_genomes_project 3 40315344 40375121 + MGP_LPJ_P0060537 Jade1 protein_coding protein_coding MGP_LPJ_T0060538.1 MGP_LPJ_G0027124.1 mouse_genomes_project 3 40315386 40344724 + Jade1 protein_coding processed_transcript MGP_LPJ_T0060539.1 MGP_LPJ_G0027124.1 mouse_genomes_project 3 40315582 40372321 + MGP_LPJ_P0060539 Jade1 protein_coding protein_coding MGP_LPJ_T0060540.1 MGP_LPJ_G0027124.1 mouse_genomes_project 3 40316831 40374377 + MGP_LPJ_P0060540 Jade1 protein_coding protein_coding MGP_LPJ_T0060541.1 MGP_LPJ_G0027124.1 mouse_genomes_project 3 40316875 40344722 + Jade1 protein_coding processed_transcript MGP_LPJ_T0060542.1 MGP_LPJ_G0027124.1 mouse_genomes_project 3 40316897 40364941 + MGP_LPJ_P0060542 Jade1 protein_coding protein_coding MGP_LPJ_T0060543.1 MGP_LPJ_G0027124.1 mouse_genomes_project 3 40332875 40341993 + Jade1 protein_coding retained_intron MGP_LPJ_T0060544.1 MGP_LPJ_G0027124.1 mouse_genomes_project 3 40344662 40353131 + Jade1 protein_coding retained_intron MGP_LPJ_T0060545.1 MGP_LPJ_G0027124.1 mouse_genomes_project 3 40346762 40362810 + Jade1 protein_coding retained_intron MGP_LPJ_T0060546.1 MGP_LPJ_G0027124.1 mouse_genomes_project 3 40349626 40363046 + MGP_LPJ_P0060546 Jade1 protein_coding protein_coding MGP_LPJ_T0060547.1 MGP_LPJ_G0027124.1 mouse_genomes_project 3 40360675 40363053 + Jade1 protein_coding processed_transcript MGP_LPJ_T0004229.1 MGP_LPJ_G0003726.1 mouse_genomes_project 3 28868741 28874903 + Gm15462 antisense antisense MGP_LPJ_T0063107.1 MGP_LPJ_G0027710.1 mouse_genomes_project 3 111664130 111708344 - MGP_LPJ_P0063107 Gpsm2 protein_coding protein_coding MGP_LPJ_T0063108.1 MGP_LPJ_G0027710.1 mouse_genomes_project 3 111687467 111688557 - Gpsm2 protein_coding retained_intron MGP_LPJ_T0063109.1 MGP_LPJ_G0027710.1 mouse_genomes_project 3 111687883 111697706 - MGP_LPJ_P0063109 Gpsm2 protein_coding protein_coding MGP_LPJ_T0063110.1 MGP_LPJ_G0027710.1 mouse_genomes_project 3 111689019 111708151 - Gpsm2 protein_coding processed_transcript MGP_LPJ_T0014224.1 MGP_LPJ_G0012315.1 mouse_genomes_project 3 118560628 118561049 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004239.1 MGP_LPJ_G0003734.1 mouse_genomes_project 3 34464397 34474046 + Gm15952 antisense antisense MGP_LPJ_T0004240.1 MGP_LPJ_G0003734.1 mouse_genomes_project 3 34464397 34522895 + Gm15952 antisense antisense MGP_LPJ_T0004241.1 MGP_LPJ_G0003734.1 mouse_genomes_project 3 34464409 34469375 + Gm15952 antisense antisense MGP_LPJ_T0007540.1 MGP_LPJ_G0006178.1 mouse_genomes_project 3 40225118 40229427 - Gm42434 lincRNA lincRNA MGP_LPJ_T0007541.1 MGP_LPJ_G0006178.1 mouse_genomes_project 3 40229302 40229933 - Gm42434 lincRNA lincRNA MGP_LPJ_T0062017.1 MGP_LPJ_G0027456.1 mouse_genomes_project 3 94609310 94610571 - MGP_LPJ_P0062017 Lce3a protein_coding protein_coding MGP_LPJ_T0014231.1 MGP_LPJ_G0012322.1 mouse_genomes_project 3 120588112 120588791 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100683.1 MGP_LPJ_G0038946.1 mouse_genomes_project 3 87070771 87070893 + Gm25188 snoRNA snoRNA MGP_LPJ_T0060932.1 MGP_LPJ_G0027207.1 mouse_genomes_project 3 65409190 65423316 - MGP_LPJ_P0060932 Ssr3 protein_coding protein_coding MGP_LPJ_T0060933.1 MGP_LPJ_G0027207.1 mouse_genomes_project 3 65411214 65412916 - Ssr3 protein_coding retained_intron MGP_LPJ_T0060934.1 MGP_LPJ_G0027207.1 mouse_genomes_project 3 65411564 65423246 - MGP_LPJ_P0060934 Ssr3 protein_coding protein_coding MGP_LPJ_T0007638.1 MGP_LPJ_G0006247.1 mouse_genomes_project 3 97428502 97436975 - lincRNA lincRNA MGP_LPJ_T0014100.1 MGP_LPJ_G0012191.1 mouse_genomes_project 3 82186138 82186418 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001139.1 MGP_LPJ_G0001062.1 mouse_genomes_project 3 2504909 2507287 + TEC TEC MGP_LPJ_T0001140.1 MGP_LPJ_G0001062.1 mouse_genomes_project 3 2506833 2507166 + TEC TEC MGP_LPJ_T0007798.1 MGP_LPJ_G0006376.1 mouse_genomes_project 3 161365086 161398154 + 9330178D15Rik lincRNA lincRNA MGP_LPJ_T0098594.1 MGP_LPJ_G0036868.1 mouse_genomes_project 3 149250911 149251684 - Gm43560 sense_intronic sense_intronic MGP_LPJ_T0001167.1 MGP_LPJ_G0001089.1 mouse_genomes_project 3 30284594 30289345 + TEC TEC MGP_LPJ_T0007785.1 MGP_LPJ_G0006368.1 mouse_genomes_project 3 155685538 155691040 + Gm43470 lincRNA lincRNA MGP_LPJ_T0007786.1 MGP_LPJ_G0006368.1 mouse_genomes_project 3 155685617 155706978 + Gm43470 lincRNA lincRNA MGP_LPJ_T0001251.1 MGP_LPJ_G0001171.1 mouse_genomes_project 3 55474441 55476306 - TEC TEC MGP_LPJ_T0013978.1 MGP_LPJ_G0012069.1 mouse_genomes_project 3 43579237 43579619 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004339.1 MGP_LPJ_G0003805.1 mouse_genomes_project 3 104778592 104780788 + Gm16160 antisense antisense MGP_LPJ_T0061963.1 MGP_LPJ_G0027413.1 mouse_genomes_project 3 92001832 92003365 + MGP_LPJ_P0061963 S100a6 protein_coding protein_coding MGP_LPJ_T0061964.1 MGP_LPJ_G0027413.1 mouse_genomes_project 3 92002104 92002958 + S100a6 protein_coding retained_intron MGP_LPJ_T0061965.1 MGP_LPJ_G0027413.1 mouse_genomes_project 3 92002255 92003365 + MGP_LPJ_P0061965 S100a6 protein_coding protein_coding MGP_LPJ_T0061966.1 MGP_LPJ_G0027413.1 mouse_genomes_project 3 92002710 92016584 + MGP_LPJ_P0061966 S100a6 protein_coding nonsense_mediated_decay MGP_LPJ_T0007671.1 MGP_LPJ_G0006275.1 mouse_genomes_project 3 109697100 109747137 - Gm35507 lincRNA lincRNA MGP_LPJ_T0062068.1 MGP_LPJ_G0027480.1 mouse_genomes_project 3 96325524 96329028 + Mrpl9 protein_coding retained_intron MGP_LPJ_T0062069.1 MGP_LPJ_G0027480.1 mouse_genomes_project 3 96325531 96330895 + MGP_LPJ_P0062069 Mrpl9 protein_coding protein_coding MGP_LPJ_T0062070.1 MGP_LPJ_G0027480.1 mouse_genomes_project 3 96325543 96333319 + MGP_LPJ_P0062070 Mrpl9 protein_coding protein_coding MGP_LPJ_T0010543.1 MGP_LPJ_G0008661.1 mouse_genomes_project 3 88687562 88687665 + Gm24109 miRNA miRNA MGP_LPJ_T0102125.1 MGP_LPJ_G0040162.1 mouse_genomes_project 3 116474930 116501223 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0060757.1 MGP_LPJ_G0027163.1 mouse_genomes_project 3 55069906 55652831 - MGP_LPJ_P0060757 Nbea protein_coding protein_coding MGP_LPJ_T0060758.1 MGP_LPJ_G0027163.1 mouse_genomes_project 3 55069910 55135636 - Nbea protein_coding processed_transcript MGP_LPJ_T0060759.1 MGP_LPJ_G0027163.1 mouse_genomes_project 3 55071231 55235538 - Nbea protein_coding processed_transcript MGP_LPJ_T0060760.1 MGP_LPJ_G0027163.1 mouse_genomes_project 3 55141055 55168520 - Nbea protein_coding retained_intron MGP_LPJ_T0060761.1 MGP_LPJ_G0027163.1 mouse_genomes_project 3 55227355 55236437 - Nbea protein_coding retained_intron MGP_LPJ_T0060762.1 MGP_LPJ_G0027163.1 mouse_genomes_project 3 55228266 55232126 - Nbea protein_coding retained_intron MGP_LPJ_T0060764.1 MGP_LPJ_G0027163.1 mouse_genomes_project 3 55419377 55426703 - Nbea protein_coding retained_intron MGP_LPJ_T0060765.1 MGP_LPJ_G0027163.1 mouse_genomes_project 3 55461729 55464154 - Nbea protein_coding retained_intron MGP_LPJ_T0060766.1 MGP_LPJ_G0027163.1 mouse_genomes_project 3 55477028 55480729 - Nbea protein_coding retained_intron MGP_LPJ_T0060767.1 MGP_LPJ_G0027163.1 mouse_genomes_project 3 55487383 55495774 - Nbea protein_coding retained_intron MGP_LPJ_T0014091.1 MGP_LPJ_G0012182.1 mouse_genomes_project 3 78578751 78580163 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099416.1 MGP_LPJ_G0037679.1 mouse_genomes_project 3 90365610 90365714 - Gm22935 snRNA snRNA MGP_LPJ_T0014252.1 MGP_LPJ_G0012343.1 mouse_genomes_project 3 127837287 127838279 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007527.1 MGP_LPJ_G0006168.1 mouse_genomes_project 3 36567282 36662575 + lincRNA lincRNA MGP_LPJ_T0062284.1 MGP_LPJ_G0027516.1 mouse_genomes_project 3 97619244 97648453 + MGP_LPJ_P0062284 Hormad1 protein_coding protein_coding MGP_LPJ_T0062285.1 MGP_LPJ_G0027516.1 mouse_genomes_project 3 97619244 97649012 + MGP_LPJ_P0062285 Hormad1 protein_coding protein_coding MGP_LPJ_T0062286.1 MGP_LPJ_G0027516.1 mouse_genomes_project 3 97619244 97648803 + MGP_LPJ_P0062286 Hormad1 protein_coding protein_coding MGP_LPJ_T0013884.1 MGP_LPJ_G0011975.1 mouse_genomes_project 3 9203193 9204207 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099383.1 MGP_LPJ_G0037646.1 mouse_genomes_project 3 39731909 39732067 + Gm22043 snRNA snRNA MGP_LPJ_T0014036.1 MGP_LPJ_G0012127.1 mouse_genomes_project 3 61883713 61887204 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060059.1 MGP_LPJ_G0027041.1 mouse_genomes_project 3 19948269 20097080 + MGP_LPJ_P0060059 Tbl1xr1 protein_coding protein_coding MGP_LPJ_T0060060.1 MGP_LPJ_G0027041.1 mouse_genomes_project 3 19948344 20093237 + MGP_LPJ_P0060060 Tbl1xr1 protein_coding protein_coding MGP_LPJ_T0060061.1 MGP_LPJ_G0027041.1 mouse_genomes_project 3 19948373 20062757 + Tbl1xr1 protein_coding processed_transcript MGP_LPJ_T0060062.1 MGP_LPJ_G0027041.1 mouse_genomes_project 3 19948449 20071411 + MGP_LPJ_P0060062 Tbl1xr1 protein_coding protein_coding MGP_LPJ_T0060063.1 MGP_LPJ_G0027041.1 mouse_genomes_project 3 19948498 20064101 + Tbl1xr1 protein_coding processed_transcript MGP_LPJ_T0060064.1 MGP_LPJ_G0027041.1 mouse_genomes_project 3 19948553 20062725 + MGP_LPJ_P0060064 Tbl1xr1 protein_coding protein_coding MGP_LPJ_T0060065.1 MGP_LPJ_G0027041.1 mouse_genomes_project 3 19948901 20095779 + MGP_LPJ_P0060065 Tbl1xr1 protein_coding protein_coding MGP_LPJ_T0060066.1 MGP_LPJ_G0027041.1 mouse_genomes_project 3 19986767 20092454 + MGP_LPJ_P0060066 Tbl1xr1 protein_coding protein_coding MGP_LPJ_T0060067.1 MGP_LPJ_G0027041.1 mouse_genomes_project 3 20011505 20064094 + MGP_LPJ_P0060067 Tbl1xr1 protein_coding protein_coding MGP_LPJ_T0060068.1 MGP_LPJ_G0027041.1 mouse_genomes_project 3 20021173 20093561 + MGP_LPJ_P0060068 Tbl1xr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0060069.1 MGP_LPJ_G0027041.1 mouse_genomes_project 3 20083677 20091065 + MGP_LPJ_P0060069 Tbl1xr1 protein_coding protein_coding MGP_LPJ_T0100725.1 MGP_LPJ_G0038988.1 mouse_genomes_project 3 159208009 159208090 - Gm24494 snoRNA snoRNA MGP_LPJ_T0014296.1 MGP_LPJ_G0012387.1 mouse_genomes_project 3 140691465 140692970 + processed_pseudogene processed_pseudogene MGP_LPJ_T0063340.1 MGP_LPJ_G0027757.1 mouse_genomes_project 3 125138709 125172243 + Cnn3 protein_coding retained_intron MGP_LPJ_T0063341.1 MGP_LPJ_G0027757.1 mouse_genomes_project 3 125138936 125169799 + MGP_LPJ_P0063341 Cnn3 protein_coding protein_coding MGP_LPJ_T0063342.1 MGP_LPJ_G0027757.1 mouse_genomes_project 3 125139446 125162679 + Cnn3 protein_coding processed_transcript MGP_LPJ_T0063343.1 MGP_LPJ_G0027757.1 mouse_genomes_project 3 125163317 125171398 + Cnn3 protein_coding retained_intron MGP_LPJ_T0063344.1 MGP_LPJ_G0027757.1 mouse_genomes_project 3 125169052 125171991 + MGP_LPJ_P0063344 Cnn3 protein_coding protein_coding MGP_LPJ_T0063345.1 MGP_LPJ_G0027757.1 mouse_genomes_project 3 125169081 125171993 + MGP_LPJ_P0063345 Cnn3 protein_coding protein_coding MGP_LPJ_T0098545.1 MGP_LPJ_G0036819.1 mouse_genomes_project 3 101643216 101646672 + Gm42717 sense_intronic sense_intronic MGP_LPJ_T0001171.1 MGP_LPJ_G0001093.1 mouse_genomes_project 3 31435679 31438506 - TEC TEC MGP_LPJ_T0063715.1 MGP_LPJ_G0027825.1 mouse_genomes_project 3 137740775 137827314 - MGP_LPJ_P0063715 Tet2 protein_coding protein_coding MGP_LPJ_T0063716.1 MGP_LPJ_G0027825.1 mouse_genomes_project 3 137740779 137752536 - Tet2 protein_coding retained_intron MGP_LPJ_T0063717.1 MGP_LPJ_G0027825.1 mouse_genomes_project 3 137740935 137827292 - MGP_LPJ_P0063717 Tet2 protein_coding protein_coding MGP_LPJ_T0063718.1 MGP_LPJ_G0027825.1 mouse_genomes_project 3 137743845 137749816 - Tet2 protein_coding retained_intron MGP_LPJ_T0063719.1 MGP_LPJ_G0027825.1 mouse_genomes_project 3 137745525 137754279 - MGP_LPJ_P0063719 Tet2 protein_coding protein_coding MGP_LPJ_T0063720.1 MGP_LPJ_G0027825.1 mouse_genomes_project 3 137752783 137756635 - Tet2 protein_coding retained_intron MGP_LPJ_T0063721.1 MGP_LPJ_G0027825.1 mouse_genomes_project 3 137756764 137758379 - Tet2 protein_coding retained_intron MGP_LPJ_T0063722.1 MGP_LPJ_G0027825.1 mouse_genomes_project 3 137768020 137828063 - MGP_LPJ_P0063722 Tet2 protein_coding protein_coding MGP_LPJ_T0063723.1 MGP_LPJ_G0027825.1 mouse_genomes_project 3 137795101 137827226 - Tet2 protein_coding retained_intron MGP_LPJ_T0063724.1 MGP_LPJ_G0027825.1 mouse_genomes_project 3 137821644 137827210 - Tet2 protein_coding processed_transcript MGP_LPJ_T0004268.1 MGP_LPJ_G0003755.1 mouse_genomes_project 3 58972850 58979454 + Gm38186 antisense antisense MGP_LPJ_T0061379.1 MGP_LPJ_G0027310.1 mouse_genomes_project 3 89023717 89036216 + MGP_LPJ_P0061379 Isg20l2 protein_coding protein_coding MGP_LPJ_T0014134.1 MGP_LPJ_G0012225.1 mouse_genomes_project 3 94834827 94834959 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100649.1 MGP_LPJ_G0038912.1 mouse_genomes_project 3 1673346 1673479 - Gm22944 snoRNA snoRNA MGP_LPJ_T0007719.1 MGP_LPJ_G0006312.1 mouse_genomes_project 3 135104652 135106080 + Gm36520 lincRNA lincRNA MGP_LPJ_T0061133.1 MGP_LPJ_G0027254.1 mouse_genomes_project 3 80566249 80629432 + MGP_LPJ_P0061133 Fam198b protein_coding protein_coding MGP_LPJ_T0061134.1 MGP_LPJ_G0027254.1 mouse_genomes_project 3 80566313 80618500 + MGP_LPJ_P0061134 Fam198b protein_coding protein_coding MGP_LPJ_T0061135.1 MGP_LPJ_G0027254.1 mouse_genomes_project 3 80566647 80567944 + MGP_LPJ_P0061135 Fam198b protein_coding protein_coding MGP_LPJ_T0061136.1 MGP_LPJ_G0027254.1 mouse_genomes_project 3 80567630 80629430 + MGP_LPJ_P0061136 Fam198b protein_coding protein_coding MGP_LPJ_T0061137.1 MGP_LPJ_G0027254.1 mouse_genomes_project 3 80567756 80571346 + Fam198b protein_coding retained_intron MGP_LPJ_T0101335.1 MGP_LPJ_G0039543.1 mouse_genomes_project 3 131519349 131520344 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0014227.1 MGP_LPJ_G0012318.1 mouse_genomes_project 3 119981657 119982099 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001243.1 MGP_LPJ_G0001163.1 mouse_genomes_project 3 52432385 52432841 + TEC TEC MGP_LPJ_T0013888.1 MGP_LPJ_G0011979.1 mouse_genomes_project 3 10557213 10557556 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007485.1 MGP_LPJ_G0006133.1 mouse_genomes_project 3 16148847 16272898 - lincRNA lincRNA MGP_LPJ_T0014193.1 MGP_LPJ_G0012284.1 mouse_genomes_project 3 108871479 108871795 + processed_pseudogene processed_pseudogene MGP_LPJ_T0063759.1 MGP_LPJ_G0027833.1 mouse_genomes_project 3 139755301 139783480 + MGP_LPJ_P0063759 Ube2d3 protein_coding protein_coding MGP_LPJ_T0063760.1 MGP_LPJ_G0027833.1 mouse_genomes_project 3 139755468 139783529 + MGP_LPJ_P0063760 Ube2d3 protein_coding protein_coding MGP_LPJ_T0063761.1 MGP_LPJ_G0027833.1 mouse_genomes_project 3 139755681 139758748 + Ube2d3 protein_coding processed_transcript MGP_LPJ_T0063762.1 MGP_LPJ_G0027833.1 mouse_genomes_project 3 139755685 139777134 + MGP_LPJ_P0063762 Ube2d3 protein_coding protein_coding MGP_LPJ_T0063763.1 MGP_LPJ_G0027833.1 mouse_genomes_project 3 139755695 139781276 + MGP_LPJ_P0063763 Ube2d3 protein_coding protein_coding MGP_LPJ_T0063764.1 MGP_LPJ_G0027833.1 mouse_genomes_project 3 139755717 139788580 + MGP_LPJ_P0063764 Ube2d3 protein_coding protein_coding MGP_LPJ_T0063765.1 MGP_LPJ_G0027833.1 mouse_genomes_project 3 139755899 139772390 + MGP_LPJ_P0063765 Ube2d3 protein_coding protein_coding MGP_LPJ_T0063766.1 MGP_LPJ_G0027833.1 mouse_genomes_project 3 139755906 139783540 + MGP_LPJ_P0063766 Ube2d3 protein_coding nonsense_mediated_decay MGP_LPJ_T0063767.1 MGP_LPJ_G0027833.1 mouse_genomes_project 3 139756016 139775301 + Ube2d3 protein_coding retained_intron MGP_LPJ_T0063768.1 MGP_LPJ_G0027833.1 mouse_genomes_project 3 139771767 139777178 + Ube2d3 protein_coding retained_intron MGP_LPJ_T0063769.1 MGP_LPJ_G0027833.1 mouse_genomes_project 3 139775785 139778924 + Ube2d3 protein_coding retained_intron MGP_LPJ_T0102117.1 MGP_LPJ_G0040154.1 mouse_genomes_project 3 101261370 101275379 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0014247.1 MGP_LPJ_G0012338.1 mouse_genomes_project 3 126733276 126733471 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014321.1 MGP_LPJ_G0012412.1 mouse_genomes_project 3 149520240 149520807 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007615.1 MGP_LPJ_G0006236.1 mouse_genomes_project 3 88187393 88192138 + Gm37855 lincRNA lincRNA MGP_LPJ_T0061782.1 MGP_LPJ_G0027383.1 mouse_genomes_project 3 91141995 91172710 + MGP_LPJ_P0061782 She protein_coding protein_coding MGP_LPJ_T0061783.1 MGP_LPJ_G0027383.1 mouse_genomes_project 3 91150952 91152433 + She protein_coding retained_intron MGP_LPJ_T0001357.1 MGP_LPJ_G0001277.1 mouse_genomes_project 3 130971902 130973539 - TEC TEC MGP_LPJ_T0004251.1 MGP_LPJ_G0003741.1 mouse_genomes_project 3 37730829 37731911 - Gm43539 antisense antisense MGP_LPJ_T0014237.1 MGP_LPJ_G0012328.1 mouse_genomes_project 3 124865466 124866461 - processed_pseudogene processed_pseudogene MGP_LPJ_T0064396.1 MGP_LPJ_G0027946.1 mouse_genomes_project 3 165346388 165487911 + MGP_LPJ_P0064396 Wls protein_coding protein_coding MGP_LPJ_T0064397.1 MGP_LPJ_G0027946.1 mouse_genomes_project 3 165346453 165490563 + MGP_LPJ_P0064397 Wls protein_coding protein_coding MGP_LPJ_T0064398.1 MGP_LPJ_G0027946.1 mouse_genomes_project 3 165346455 165447297 + Wls protein_coding retained_intron MGP_LPJ_T0064399.1 MGP_LPJ_G0027946.1 mouse_genomes_project 3 165346455 165448272 + Wls protein_coding retained_intron MGP_LPJ_T0064400.1 MGP_LPJ_G0027946.1 mouse_genomes_project 3 165346455 165486790 + MGP_LPJ_P0064400 Wls protein_coding nonsense_mediated_decay MGP_LPJ_T0064401.1 MGP_LPJ_G0027946.1 mouse_genomes_project 3 165346626 165407262 + Wls protein_coding retained_intron MGP_LPJ_T0064402.1 MGP_LPJ_G0027946.1 mouse_genomes_project 3 165363649 165366474 + Wls protein_coding retained_intron MGP_LPJ_T0014169.1 MGP_LPJ_G0012260.1 mouse_genomes_project 3 102882444 102883460 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062775.1 MGP_LPJ_G0027629.1 mouse_genomes_project 3 106555873 106607840 + MGP_LPJ_P0062775 Rsbn1 protein_coding protein_coding MGP_LPJ_T0062776.1 MGP_LPJ_G0027629.1 mouse_genomes_project 3 106555904 106607863 + MGP_LPJ_P0062776 Rsbn1 protein_coding protein_coding MGP_LPJ_T0062777.1 MGP_LPJ_G0027629.1 mouse_genomes_project 3 106556320 106605098 + MGP_LPJ_P0062777 Rsbn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0062778.1 MGP_LPJ_G0027629.1 mouse_genomes_project 3 106570807 106601363 + MGP_LPJ_P0062778 Rsbn1 protein_coding protein_coding MGP_LPJ_T0014316.1 MGP_LPJ_G0012407.1 mouse_genomes_project 3 147302930 147303992 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013952.1 MGP_LPJ_G0012043.1 mouse_genomes_project 3 34986950 34987497 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007476.1 MGP_LPJ_G0006130.1 mouse_genomes_project 3 12908353 12927943 - Gm33819 lincRNA lincRNA MGP_LPJ_T0060469.1 MGP_LPJ_G0027113.1 mouse_genomes_project 3 37152843 37189435 - MGP_LPJ_P0060469 protein_coding protein_coding MGP_LPJ_T0060470.1 MGP_LPJ_G0027113.1 mouse_genomes_project 3 37153235 37187595 - MGP_LPJ_P0060470 protein_coding protein_coding MGP_LPJ_T0060471.1 MGP_LPJ_G0027113.1 mouse_genomes_project 3 37155656 37159134 - MGP_LPJ_P0060471 protein_coding protein_coding MGP_LPJ_T0060472.1 MGP_LPJ_G0027113.1 mouse_genomes_project 3 37187754 37189406 - protein_coding processed_transcript MGP_LPJ_T0059852.1 MGP_LPJ_G0026981.1 mouse_genomes_project 3 1961147 1964820 + MGP_LPJ_P0059852 protein_coding protein_coding MGP_LPJ_T0059853.1 MGP_LPJ_G0026981.1 mouse_genomes_project 3 1961176 1964070 + MGP_LPJ_P0059853 protein_coding nonsense_mediated_decay MGP_LPJ_T0059855.1 MGP_LPJ_G0026981.1 mouse_genomes_project 3 1961569 1964650 + MGP_LPJ_P0059855 protein_coding protein_coding MGP_LPJ_T0059857.1 MGP_LPJ_G0026981.1 mouse_genomes_project 3 1963031 1964063 + protein_coding retained_intron MGP_LPJ_T0060548.1 MGP_LPJ_G0027125.1 mouse_genomes_project 3 40385152 40514433 - MGP_LPJ_P0060548 Sclt1 protein_coding protein_coding MGP_LPJ_T0060549.1 MGP_LPJ_G0027125.1 mouse_genomes_project 3 40385374 40514400 - MGP_LPJ_P0060549 Sclt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0060550.1 MGP_LPJ_G0027125.1 mouse_genomes_project 3 40385374 40513947 - MGP_LPJ_P0060550 Sclt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0060551.1 MGP_LPJ_G0027125.1 mouse_genomes_project 3 40385538 40388744 - Sclt1 protein_coding retained_intron MGP_LPJ_T0060552.1 MGP_LPJ_G0027125.1 mouse_genomes_project 3 40388020 40437369 - Sclt1 protein_coding retained_intron MGP_LPJ_T0060553.1 MGP_LPJ_G0027125.1 mouse_genomes_project 3 40420457 40427229 - MGP_LPJ_P0060553 Sclt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0060554.1 MGP_LPJ_G0027125.1 mouse_genomes_project 3 40437877 40485995 - Sclt1 protein_coding retained_intron MGP_LPJ_T0060555.1 MGP_LPJ_G0027125.1 mouse_genomes_project 3 40513437 40514324 - Sclt1 protein_coding retained_intron MGP_LPJ_T0014323.1 MGP_LPJ_G0012414.1 mouse_genomes_project 3 150579729 150580169 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060826.1 MGP_LPJ_G0027181.1 mouse_genomes_project 3 58747068 58763931 - MGP_LPJ_P0060826 P2ry14 protein_coding protein_coding MGP_LPJ_T0060827.1 MGP_LPJ_G0027181.1 mouse_genomes_project 3 58747838 58787497 - MGP_LPJ_P0060827 P2ry14 protein_coding protein_coding MGP_LPJ_T0060828.1 MGP_LPJ_G0027181.1 mouse_genomes_project 3 58747838 58763793 - MGP_LPJ_P0060828 P2ry14 protein_coding protein_coding MGP_LPJ_T0060829.1 MGP_LPJ_G0027181.1 mouse_genomes_project 3 58747839 58763791 - MGP_LPJ_P0060829 P2ry14 protein_coding protein_coding MGP_LPJ_T0060830.1 MGP_LPJ_G0027181.1 mouse_genomes_project 3 58748145 58764496 - MGP_LPJ_P0060830 P2ry14 protein_coding protein_coding MGP_LPJ_T0060831.1 MGP_LPJ_G0027181.1 mouse_genomes_project 3 58748920 58764382 - MGP_LPJ_P0060831 P2ry14 protein_coding protein_coding MGP_LPJ_T0060832.1 MGP_LPJ_G0027181.1 mouse_genomes_project 3 58749224 58764287 - MGP_LPJ_P0060832 P2ry14 protein_coding protein_coding MGP_LPJ_T0060833.1 MGP_LPJ_G0027181.1 mouse_genomes_project 3 58749239 58765623 - MGP_LPJ_P0060833 P2ry14 protein_coding protein_coding MGP_LPJ_T0060834.1 MGP_LPJ_G0027181.1 mouse_genomes_project 3 58779832 58787623 - P2ry14 protein_coding retained_intron MGP_LPJ_T0001278.1 MGP_LPJ_G0001198.1 mouse_genomes_project 3 76444353 76446530 + TEC TEC MGP_LPJ_T0060468.1 MGP_LPJ_G0027112.1 mouse_genomes_project 3 36373211 36379323 - protein_coding processed_transcript MGP_LPJ_T0007581.1 MGP_LPJ_G0006207.1 mouse_genomes_project 3 67658235 67660492 - 4930402C01Rik lincRNA lincRNA MGP_LPJ_T0007652.1 MGP_LPJ_G0006260.1 mouse_genomes_project 3 102906685 102907990 + Gm43121 lincRNA lincRNA MGP_LPJ_T0014220.1 MGP_LPJ_G0012311.1 mouse_genomes_project 3 117062373 117062631 + processed_pseudogene processed_pseudogene MGP_LPJ_T0063674.1 MGP_LPJ_G0027817.1 mouse_genomes_project 3 136883871 136900762 + MGP_LPJ_P0063674 Gimd1 protein_coding protein_coding MGP_LPJ_T0063675.1 MGP_LPJ_G0027817.1 mouse_genomes_project 3 136888405 136900043 + MGP_LPJ_P0063675 Gimd1 protein_coding protein_coding MGP_LPJ_T0014062.1 MGP_LPJ_G0012153.1 mouse_genomes_project 3 69514383 69514642 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014275.1 MGP_LPJ_G0012366.1 mouse_genomes_project 3 137869038 137869313 - processed_pseudogene processed_pseudogene MGP_LPJ_T0064002.1 MGP_LPJ_G0027882.1 mouse_genomes_project 3 149685040 149706699 - MGP_LPJ_P0064002 Clca4a protein_coding protein_coding MGP_LPJ_T0060604.1 MGP_LPJ_G0027133.1 mouse_genomes_project 3 50608222 50618076 - MGP_LPJ_P0060604 Mgarp protein_coding protein_coding MGP_LPJ_T0060605.1 MGP_LPJ_G0027133.1 mouse_genomes_project 3 50608222 50618266 - MGP_LPJ_P0060605 Mgarp protein_coding protein_coding MGP_LPJ_T0060606.1 MGP_LPJ_G0027133.1 mouse_genomes_project 3 50608222 50618054 - MGP_LPJ_P0060606 Mgarp protein_coding protein_coding MGP_LPJ_T0060607.1 MGP_LPJ_G0027133.1 mouse_genomes_project 3 50610611 50618031 - Mgarp protein_coding retained_intron MGP_LPJ_T0060608.1 MGP_LPJ_G0027133.1 mouse_genomes_project 3 50611052 50618016 - Mgarp protein_coding processed_transcript MGP_LPJ_T0061784.1 MGP_LPJ_G0027384.1 mouse_genomes_project 3 91179658 91235697 - MGP_LPJ_P0061784 Il6ra protein_coding protein_coding MGP_LPJ_T0061785.1 MGP_LPJ_G0027384.1 mouse_genomes_project 3 91184587 91235663 - MGP_LPJ_P0061785 Il6ra protein_coding protein_coding MGP_LPJ_T0014008.1 MGP_LPJ_G0012099.1 mouse_genomes_project 3 54031606 54033294 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099439.1 MGP_LPJ_G0037702.1 mouse_genomes_project 3 123994500 123994606 - Gm23733 snRNA snRNA MGP_LPJ_T0063676.1 MGP_LPJ_G0027818.1 mouse_genomes_project 3 136917496 136944715 - MGP_LPJ_P0063676 Aimp1 protein_coding protein_coding MGP_LPJ_T0063677.1 MGP_LPJ_G0027818.1 mouse_genomes_project 3 136930741 136933730 - Aimp1 protein_coding retained_intron MGP_LPJ_T0063678.1 MGP_LPJ_G0027818.1 mouse_genomes_project 3 136931004 136938061 - Aimp1 protein_coding retained_intron MGP_LPJ_T0063679.1 MGP_LPJ_G0027818.1 mouse_genomes_project 3 136932959 136945201 - MGP_LPJ_P0063679 Aimp1 protein_coding protein_coding MGP_LPJ_T0063680.1 MGP_LPJ_G0027818.1 mouse_genomes_project 3 136933049 136944953 - MGP_LPJ_P0063680 Aimp1 protein_coding protein_coding MGP_LPJ_T0063681.1 MGP_LPJ_G0027818.1 mouse_genomes_project 3 136933065 136944668 - MGP_LPJ_P0063681 Aimp1 protein_coding protein_coding MGP_LPJ_T0063682.1 MGP_LPJ_G0027818.1 mouse_genomes_project 3 136933760 136944955 - MGP_LPJ_P0063682 Aimp1 protein_coding protein_coding MGP_LPJ_T0063683.1 MGP_LPJ_G0027818.1 mouse_genomes_project 3 136940704 136944667 - Aimp1 protein_coding retained_intron MGP_LPJ_T0099423.1 MGP_LPJ_G0037686.1 mouse_genomes_project 3 94677073 94677182 - Gm22577 snRNA snRNA MGP_LPJ_T0098588.1 MGP_LPJ_G0036862.1 mouse_genomes_project 3 108569973 108571662 - Gm43331 sense_intronic sense_intronic MGP_LPJ_T0014035.1 MGP_LPJ_G0012126.1 mouse_genomes_project 3 61131769 61132264 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014293.1 MGP_LPJ_G0012384.1 mouse_genomes_project 3 140248660 140249207 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001330.1 MGP_LPJ_G0001250.1 mouse_genomes_project 3 124719912 124720609 - TEC TEC MGP_LPJ_T0063083.1 MGP_LPJ_G0027705.1 mouse_genomes_project 3 111511464 111514304 + 1700013F07Rik protein_coding processed_transcript MGP_LPJ_T0063084.1 MGP_LPJ_G0027705.1 mouse_genomes_project 3 111514144 111519700 + 1700013F07Rik protein_coding processed_transcript MGP_LPJ_T0063085.1 MGP_LPJ_G0027705.1 mouse_genomes_project 3 111514151 111521342 + MGP_LPJ_P0063085 1700013F07Rik protein_coding protein_coding MGP_LPJ_T0062917.1 MGP_LPJ_G0027662.1 mouse_genomes_project 3 109532242 109603297 + MGP_LPJ_P0062917 Lrif1 protein_coding protein_coding MGP_LPJ_T0062918.1 MGP_LPJ_G0027662.1 mouse_genomes_project 3 109532253 109599591 + Lrif1 protein_coding processed_transcript MGP_LPJ_T0062919.1 MGP_LPJ_G0027662.1 mouse_genomes_project 3 109588632 109599604 + MGP_LPJ_P0062919 Lrif1 protein_coding protein_coding MGP_LPJ_T0062920.1 MGP_LPJ_G0027662.1 mouse_genomes_project 3 109588797 109601775 + MGP_LPJ_P0062920 Lrif1 protein_coding nonsense_mediated_decay MGP_LPJ_T0062921.1 MGP_LPJ_G0027662.1 mouse_genomes_project 3 109588797 109603970 + MGP_LPJ_P0062921 Lrif1 protein_coding protein_coding MGP_LPJ_T0062922.1 MGP_LPJ_G0027662.1 mouse_genomes_project 3 109588812 109599442 + MGP_LPJ_P0062922 Lrif1 protein_coding protein_coding MGP_LPJ_T0062923.1 MGP_LPJ_G0027662.1 mouse_genomes_project 3 109588829 109602011 + Lrif1 protein_coding retained_intron MGP_LPJ_T0062924.1 MGP_LPJ_G0027662.1 mouse_genomes_project 3 109588830 109594055 + Lrif1 protein_coding retained_intron MGP_LPJ_T0062925.1 MGP_LPJ_G0027662.1 mouse_genomes_project 3 109588830 109600980 + Lrif1 protein_coding processed_transcript MGP_LPJ_T0062926.1 MGP_LPJ_G0027662.1 mouse_genomes_project 3 109588840 109603967 + MGP_LPJ_P0062926 Lrif1 protein_coding protein_coding MGP_LPJ_T0062927.1 MGP_LPJ_G0027662.1 mouse_genomes_project 3 109588871 109599456 + MGP_LPJ_P0062927 Lrif1 protein_coding protein_coding MGP_LPJ_T0062928.1 MGP_LPJ_G0027662.1 mouse_genomes_project 3 109600306 109601220 + Lrif1 protein_coding retained_intron MGP_LPJ_T0004299.1 MGP_LPJ_G0003779.1 mouse_genomes_project 3 90683769 90690908 + Gm15417 antisense antisense MGP_LPJ_T0004300.1 MGP_LPJ_G0003779.1 mouse_genomes_project 3 90683889 90690908 + Gm15417 antisense antisense MGP_LPJ_T0004301.1 MGP_LPJ_G0003779.1 mouse_genomes_project 3 90686076 90691302 + Gm15417 antisense antisense MGP_LPJ_T0004302.1 MGP_LPJ_G0003779.1 mouse_genomes_project 3 90688099 90690830 + Gm15417 antisense antisense MGP_LPJ_T0060741.1 MGP_LPJ_G0027161.1 mouse_genomes_project 3 54683092 54996100 + MGP_LPJ_P0060741 Dclk1 protein_coding protein_coding MGP_LPJ_T0060742.1 MGP_LPJ_G0027161.1 mouse_genomes_project 3 54683254 54996096 + MGP_LPJ_P0060742 Dclk1 protein_coding protein_coding MGP_LPJ_T0060743.1 MGP_LPJ_G0027161.1 mouse_genomes_project 3 54683254 54923511 + MGP_LPJ_P0060743 Dclk1 protein_coding protein_coding MGP_LPJ_T0060744.1 MGP_LPJ_G0027161.1 mouse_genomes_project 3 54688396 54697747 + MGP_LPJ_P0060744 Dclk1 protein_coding protein_coding MGP_LPJ_T0060745.1 MGP_LPJ_G0027161.1 mouse_genomes_project 3 54688604 54697717 + Dclk1 protein_coding retained_intron MGP_LPJ_T0060746.1 MGP_LPJ_G0027161.1 mouse_genomes_project 3 54801060 54930098 + Dclk1 protein_coding processed_transcript MGP_LPJ_T0060747.1 MGP_LPJ_G0027161.1 mouse_genomes_project 3 54898879 54932731 + Dclk1 protein_coding retained_intron MGP_LPJ_T0060748.1 MGP_LPJ_G0027161.1 mouse_genomes_project 3 54913894 54923513 + MGP_LPJ_P0060748 Dclk1 protein_coding protein_coding MGP_LPJ_T0060749.1 MGP_LPJ_G0027161.1 mouse_genomes_project 3 54913924 54996096 + MGP_LPJ_P0060749 Dclk1 protein_coding protein_coding MGP_LPJ_T0060750.1 MGP_LPJ_G0027161.1 mouse_genomes_project 3 54914065 54993586 + MGP_LPJ_P0060750 Dclk1 protein_coding protein_coding MGP_LPJ_T0060751.1 MGP_LPJ_G0027161.1 mouse_genomes_project 3 54914082 54992169 + MGP_LPJ_P0060751 Dclk1 protein_coding protein_coding MGP_LPJ_T0060752.1 MGP_LPJ_G0027161.1 mouse_genomes_project 3 54914082 54974234 + MGP_LPJ_P0060752 Dclk1 protein_coding protein_coding MGP_LPJ_T0060753.1 MGP_LPJ_G0027161.1 mouse_genomes_project 3 54914082 54993585 + MGP_LPJ_P0060753 Dclk1 protein_coding protein_coding MGP_LPJ_T0060754.1 MGP_LPJ_G0027161.1 mouse_genomes_project 3 54914138 54979316 + MGP_LPJ_P0060754 Dclk1 protein_coding protein_coding MGP_LPJ_T0060756.1 MGP_LPJ_G0027161.1 mouse_genomes_project 3 54984912 54991346 + Dclk1 protein_coding processed_transcript MGP_LPJ_T0064318.1 MGP_LPJ_G0027934.1 mouse_genomes_project 3 160440184 160448668 - MGP_LPJ_P0064318 Fpgt protein_coding protein_coding MGP_LPJ_T0064319.1 MGP_LPJ_G0027934.1 mouse_genomes_project 3 160442985 160448462 - Fpgt protein_coding processed_transcript MGP_LPJ_T0064320.1 MGP_LPJ_G0027934.1 mouse_genomes_project 3 160444294 160445786 - Fpgt protein_coding retained_intron MGP_LPJ_T0064321.1 MGP_LPJ_G0027934.1 mouse_genomes_project 3 160446209 160448633 - Fpgt protein_coding retained_intron MGP_LPJ_T0064322.1 MGP_LPJ_G0027934.1 mouse_genomes_project 3 160446589 160447820 - Fpgt protein_coding processed_transcript MGP_LPJ_T0064323.1 MGP_LPJ_G0027934.1 mouse_genomes_project 3 160446674 160448492 - Fpgt protein_coding processed_transcript MGP_LPJ_T0063239.1 MGP_LPJ_G0027739.1 mouse_genomes_project 3 120009661 120019804 + Lrrc39 protein_coding retained_intron MGP_LPJ_T0063240.1 MGP_LPJ_G0027739.1 mouse_genomes_project 3 120009666 120029803 + MGP_LPJ_P0063240 Lrrc39 protein_coding protein_coding MGP_LPJ_T0001238.1 MGP_LPJ_G0001158.1 mouse_genomes_project 3 51334445 51336243 - TEC TEC MGP_LPJ_T0001255.1 MGP_LPJ_G0001175.1 mouse_genomes_project 3 57179591 57183546 - TEC TEC MGP_LPJ_T0099381.1 MGP_LPJ_G0037644.1 mouse_genomes_project 3 34254807 34254912 + Gm25696 snRNA snRNA MGP_LPJ_T0059979.1 MGP_LPJ_G0027022.1 mouse_genomes_project 3 13971897 14011022 + MGP_LPJ_P0059979 Ythdf3 protein_coding protein_coding MGP_LPJ_T0059980.1 MGP_LPJ_G0027022.1 mouse_genomes_project 3 13971921 13995719 + Ythdf3 protein_coding processed_transcript MGP_LPJ_T0059981.1 MGP_LPJ_G0027022.1 mouse_genomes_project 3 13971921 14008991 + MGP_LPJ_P0059981 Ythdf3 protein_coding protein_coding MGP_LPJ_T0059982.1 MGP_LPJ_G0027022.1 mouse_genomes_project 3 13971921 14010840 + MGP_LPJ_P0059982 Ythdf3 protein_coding protein_coding MGP_LPJ_T0100662.1 MGP_LPJ_G0038925.1 mouse_genomes_project 3 36664953 36665084 - Gm22899 snoRNA snoRNA MGP_LPJ_T0001239.1 MGP_LPJ_G0001159.1 mouse_genomes_project 3 51559746 51561780 + TEC TEC MGP_LPJ_T0001202.1 MGP_LPJ_G0001124.1 mouse_genomes_project 3 44165223 44167796 - TEC TEC MGP_LPJ_T0060377.1 MGP_LPJ_G0027097.1 mouse_genomes_project 3 35053917 35061945 + MGP_LPJ_P0060377 1810062G17Rik protein_coding protein_coding MGP_LPJ_T0007491.1 MGP_LPJ_G0006138.1 mouse_genomes_project 3 19115037 19115756 - Gm29137 lincRNA lincRNA MGP_LPJ_T0060989.1 MGP_LPJ_G0027219.1 mouse_genomes_project 3 67670332 67691554 + MGP_LPJ_P0060989 Mfsd1 protein_coding protein_coding MGP_LPJ_T0060990.1 MGP_LPJ_G0027219.1 mouse_genomes_project 3 67672337 67683525 + Mfsd1 protein_coding processed_transcript MGP_LPJ_T0014044.1 MGP_LPJ_G0012135.1 mouse_genomes_project 3 65649954 65651295 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013946.1 MGP_LPJ_G0012037.1 mouse_genomes_project 3 34053363 34054282 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007637.1 MGP_LPJ_G0006246.1 mouse_genomes_project 3 96291186 96294711 - 1700040D17Rik lincRNA lincRNA MGP_LPJ_T0013957.1 MGP_LPJ_G0012048.1 mouse_genomes_project 3 35736179 35737284 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062087.1 MGP_LPJ_G0027483.1 mouse_genomes_project 3 96384383 96466218 - MGP_LPJ_P0062087 Snx27 protein_coding protein_coding MGP_LPJ_T0062088.1 MGP_LPJ_G0027483.1 mouse_genomes_project 3 96386154 96466051 - MGP_LPJ_P0062088 Snx27 protein_coding protein_coding MGP_LPJ_T0062089.1 MGP_LPJ_G0027483.1 mouse_genomes_project 3 96387882 96412684 - Snx27 protein_coding processed_transcript MGP_LPJ_T0062090.1 MGP_LPJ_G0027483.1 mouse_genomes_project 3 96387968 96466181 - MGP_LPJ_P0062090 Snx27 protein_coding nonsense_mediated_decay MGP_LPJ_T0062091.1 MGP_LPJ_G0027483.1 mouse_genomes_project 3 96387978 96407484 - Snx27 protein_coding processed_transcript MGP_LPJ_T0062092.1 MGP_LPJ_G0027483.1 mouse_genomes_project 3 96388895 96445053 - MGP_LPJ_P0062092 Snx27 protein_coding protein_coding MGP_LPJ_T0062093.1 MGP_LPJ_G0027483.1 mouse_genomes_project 3 96407502 96444817 - MGP_LPJ_P0062093 Snx27 protein_coding nonsense_mediated_decay MGP_LPJ_T0062094.1 MGP_LPJ_G0027483.1 mouse_genomes_project 3 96419634 96420283 - Snx27 protein_coding processed_transcript MGP_LPJ_T0004246.1 MGP_LPJ_G0003737.1 mouse_genomes_project 3 35666027 35675234 - Gm12531 antisense antisense MGP_LPJ_T0004247.1 MGP_LPJ_G0003737.1 mouse_genomes_project 3 35666029 35675229 - Gm12531 antisense antisense MGP_LPJ_T0062939.1 MGP_LPJ_G0027670.1 mouse_genomes_project 3 110127594 110133451 - MGP_LPJ_P0062939 Prok1 protein_coding protein_coding MGP_LPJ_T0062940.1 MGP_LPJ_G0027670.1 mouse_genomes_project 3 110127612 110132060 - Prok1 protein_coding retained_intron MGP_LPJ_T0062941.1 MGP_LPJ_G0027670.1 mouse_genomes_project 3 110129930 110134506 - MGP_LPJ_P0062941 Prok1 protein_coding protein_coding MGP_LPJ_T0060094.1 MGP_LPJ_G0027046.1 mouse_genomes_project 3 25169959 25234746 + MGP_LPJ_P0060094 Nceh1 protein_coding protein_coding MGP_LPJ_T0060095.1 MGP_LPJ_G0027046.1 mouse_genomes_project 3 25169998 25216107 + Nceh1 protein_coding retained_intron MGP_LPJ_T0060096.1 MGP_LPJ_G0027046.1 mouse_genomes_project 3 25169998 25275329 + MGP_LPJ_P0060096 Nceh1 protein_coding protein_coding MGP_LPJ_T0060097.1 MGP_LPJ_G0027046.1 mouse_genomes_project 3 25169998 25211022 + MGP_LPJ_P0060097 Nceh1 protein_coding nonsense_mediated_decay MGP_LPJ_T0060098.1 MGP_LPJ_G0027046.1 mouse_genomes_project 3 25175435 25229372 + Nceh1 protein_coding processed_transcript MGP_LPJ_T0014082.1 MGP_LPJ_G0012173.1 mouse_genomes_project 3 74675741 74676078 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060173.1 MGP_LPJ_G0027059.1 mouse_genomes_project 3 28778454 28798398 + MGP_LPJ_P0060173 Mynn protein_coding protein_coding MGP_LPJ_T0060174.1 MGP_LPJ_G0027059.1 mouse_genomes_project 3 28779020 28798398 + MGP_LPJ_P0060174 Mynn protein_coding nonsense_mediated_decay MGP_LPJ_T0060175.1 MGP_LPJ_G0027059.1 mouse_genomes_project 3 28779026 28796717 + MGP_LPJ_P0060175 Mynn protein_coding protein_coding MGP_LPJ_T0060176.1 MGP_LPJ_G0027059.1 mouse_genomes_project 3 28779028 28780550 + Mynn protein_coding retained_intron MGP_LPJ_T0060177.1 MGP_LPJ_G0027059.1 mouse_genomes_project 3 28779033 28796850 + MGP_LPJ_P0060177 Mynn protein_coding nonsense_mediated_decay MGP_LPJ_T0060178.1 MGP_LPJ_G0027059.1 mouse_genomes_project 3 28789935 28795144 + Mynn protein_coding retained_intron MGP_LPJ_T0064052.1 MGP_LPJ_G0027892.1 mouse_genomes_project 3 150843860 150881029 + MGP_LPJ_P0064052 Syde2 protein_coding protein_coding MGP_LPJ_T0064053.1 MGP_LPJ_G0027892.1 mouse_genomes_project 3 150844643 150881029 + MGP_LPJ_P0064053 Syde2 protein_coding protein_coding MGP_LPJ_T0064054.1 MGP_LPJ_G0027892.1 mouse_genomes_project 3 150850336 150856661 + Syde2 protein_coding processed_transcript MGP_LPJ_T0001164.1 MGP_LPJ_G0001086.1 mouse_genomes_project 3 28669953 28672106 - TEC TEC MGP_LPJ_T0007648.1 MGP_LPJ_G0006256.1 mouse_genomes_project 3 100122445 100131279 - Gm15999 lincRNA lincRNA MGP_LPJ_T0102099.1 MGP_LPJ_G0040136.1 mouse_genomes_project 3 89536468 89540317 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0001312.1 MGP_LPJ_G0001232.1 mouse_genomes_project 3 109411344 109413376 + TEC TEC MGP_LPJ_T0061241.1 MGP_LPJ_G0027280.1 mouse_genomes_project 3 85391360 86845339 - MGP_LPJ_P0061241 protein_coding protein_coding MGP_LPJ_T0061264.1 MGP_LPJ_G0027280.1 mouse_genomes_project 3 86755563 86845341 - protein_coding processed_transcript MGP_LPJ_T0061265.1 MGP_LPJ_G0027280.1 mouse_genomes_project 3 86771686 86845191 - protein_coding retained_intron MGP_LPJ_T0061992.1 MGP_LPJ_G0027434.1 mouse_genomes_project 3 94148954 94150898 - MGP_LPJ_P0061992 Sprr1a protein_coding protein_coding MGP_LPJ_T0001285.1 MGP_LPJ_G0001205.1 mouse_genomes_project 3 84931004 84935121 - TEC TEC MGP_LPJ_T0001211.1 MGP_LPJ_G0001133.1 mouse_genomes_project 3 49848970 49853035 - TEC TEC MGP_LPJ_T0013953.1 MGP_LPJ_G0012044.1 mouse_genomes_project 3 35125524 35126223 - processed_pseudogene processed_pseudogene MGP_LPJ_T0063012.1 MGP_LPJ_G0027689.1 mouse_genomes_project 3 110990852 110995120 - MGP_LPJ_P0063012 Gstm4 protein_coding protein_coding MGP_LPJ_T0013917.1 MGP_LPJ_G0012008.1 mouse_genomes_project 3 18667223 18667433 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014242.1 MGP_LPJ_G0012333.1 mouse_genomes_project 3 125609378 125609755 + processed_pseudogene processed_pseudogene MGP_LPJ_T0061900.1 MGP_LPJ_G0027398.1 mouse_genomes_project 3 91756963 91763334 - Slc27a3 protein_coding retained_intron MGP_LPJ_T0061901.1 MGP_LPJ_G0027398.1 mouse_genomes_project 3 91756963 91763323 - MGP_LPJ_P0061901 Slc27a3 protein_coding protein_coding MGP_LPJ_T0061902.1 MGP_LPJ_G0027398.1 mouse_genomes_project 3 91756965 91763060 - MGP_LPJ_P0061902 Slc27a3 protein_coding protein_coding MGP_LPJ_T0061903.1 MGP_LPJ_G0027398.1 mouse_genomes_project 3 91760830 91762377 - Slc27a3 protein_coding retained_intron MGP_LPJ_T0061904.1 MGP_LPJ_G0027398.1 mouse_genomes_project 3 91761758 91763026 - Slc27a3 protein_coding processed_transcript MGP_LPJ_T0001242.1 MGP_LPJ_G0001162.1 mouse_genomes_project 3 52421719 52425895 + TEC TEC MGP_LPJ_T0063984.1 MGP_LPJ_G0027876.1 mouse_genomes_project 3 149298745 149325544 + protein_coding processed_transcript MGP_LPJ_T0063985.1 MGP_LPJ_G0027876.1 mouse_genomes_project 3 149298867 149325967 + MGP_LPJ_P0063985 protein_coding protein_coding MGP_LPJ_T0063986.1 MGP_LPJ_G0027876.1 mouse_genomes_project 3 149299134 149325948 + MGP_LPJ_P0063986 protein_coding protein_coding MGP_LPJ_T0063987.1 MGP_LPJ_G0027876.1 mouse_genomes_project 3 149299155 149301854 + protein_coding retained_intron MGP_LPJ_T0063988.1 MGP_LPJ_G0027876.1 mouse_genomes_project 3 149306093 149323719 + MGP_LPJ_P0063988 protein_coding protein_coding MGP_LPJ_T0063989.1 MGP_LPJ_G0027876.1 mouse_genomes_project 3 149318723 149319889 + protein_coding retained_intron MGP_LPJ_T0099426.1 MGP_LPJ_G0037689.1 mouse_genomes_project 3 97878674 97878860 - Gm26361 snRNA snRNA MGP_LPJ_T0101543.1 MGP_LPJ_G0039653.1 mouse_genomes_project 3 59642571 59668312 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101544.1 MGP_LPJ_G0039653.1 mouse_genomes_project 3 59650459 59667147 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0007741.1 MGP_LPJ_G0006333.1 mouse_genomes_project 3 143176849 143192832 - 4930425O10Rik lincRNA lincRNA MGP_LPJ_T0001148.1 MGP_LPJ_G0001070.1 mouse_genomes_project 3 16097100 16101929 + TEC TEC MGP_LPJ_T0100714.1 MGP_LPJ_G0038977.1 mouse_genomes_project 3 135108254 135108382 - Gm26090 snoRNA snoRNA MGP_LPJ_T0064055.1 MGP_LPJ_G0027893.1 mouse_genomes_project 3 150903595 150964035 - MGP_LPJ_P0064055 Wdr63 protein_coding protein_coding MGP_LPJ_T0064056.1 MGP_LPJ_G0027893.1 mouse_genomes_project 3 150903597 150913045 - Wdr63 protein_coding processed_transcript MGP_LPJ_T0064057.1 MGP_LPJ_G0027893.1 mouse_genomes_project 3 150905845 150914297 - Wdr63 protein_coding processed_transcript MGP_LPJ_T0063592.1 MGP_LPJ_G0027799.1 mouse_genomes_project 3 133992096 134010337 - MGP_LPJ_P0063592 Rrh protein_coding protein_coding MGP_LPJ_T0063593.1 MGP_LPJ_G0027799.1 mouse_genomes_project 3 133992097 134010337 - Rrh protein_coding processed_transcript MGP_LPJ_T0063594.1 MGP_LPJ_G0027799.1 mouse_genomes_project 3 133996272 134010349 - MGP_LPJ_P0063594 Rrh protein_coding protein_coding MGP_LPJ_T0063595.1 MGP_LPJ_G0027799.1 mouse_genomes_project 3 133996275 134010335 - MGP_LPJ_P0063595 Rrh protein_coding protein_coding MGP_LPJ_T0063596.1 MGP_LPJ_G0027799.1 mouse_genomes_project 3 133996501 134010431 - MGP_LPJ_P0063596 Rrh protein_coding protein_coding MGP_LPJ_T0063597.1 MGP_LPJ_G0027799.1 mouse_genomes_project 3 133996609 134010306 - MGP_LPJ_P0063597 Rrh protein_coding nonsense_mediated_decay MGP_LPJ_T0063598.1 MGP_LPJ_G0027799.1 mouse_genomes_project 3 134003300 134010338 - Rrh protein_coding processed_transcript MGP_LPJ_T0063599.1 MGP_LPJ_G0027799.1 mouse_genomes_project 3 134007347 134010302 - Rrh protein_coding retained_intron MGP_LPJ_T0001317.1 MGP_LPJ_G0001237.1 mouse_genomes_project 3 111509962 111512135 - TEC TEC MGP_LPJ_T0014338.1 MGP_LPJ_G0012429.1 mouse_genomes_project 3 161667795 161668261 + processed_pseudogene processed_pseudogene MGP_LPJ_T0061885.1 MGP_LPJ_G0027396.1 mouse_genomes_project 3 91628996 91644475 + MGP_LPJ_P0061885 Dennd4b protein_coding protein_coding MGP_LPJ_T0061886.1 MGP_LPJ_G0027396.1 mouse_genomes_project 3 91630325 91644475 + MGP_LPJ_P0061886 Dennd4b protein_coding protein_coding MGP_LPJ_T0061887.1 MGP_LPJ_G0027396.1 mouse_genomes_project 3 91631272 91639450 + MGP_LPJ_P0061887 Dennd4b protein_coding nonsense_mediated_decay MGP_LPJ_T0061888.1 MGP_LPJ_G0027396.1 mouse_genomes_project 3 91632827 91635509 + MGP_LPJ_P0061888 Dennd4b protein_coding nonsense_mediated_decay MGP_LPJ_T0061889.1 MGP_LPJ_G0027396.1 mouse_genomes_project 3 91639267 91641284 + MGP_LPJ_P0061889 Dennd4b protein_coding protein_coding MGP_LPJ_T0061890.1 MGP_LPJ_G0027396.1 mouse_genomes_project 3 91641208 91642149 + Dennd4b protein_coding retained_intron MGP_LPJ_T0061891.1 MGP_LPJ_G0027396.1 mouse_genomes_project 3 91641813 91642476 + Dennd4b protein_coding retained_intron MGP_LPJ_T0004354.1 MGP_LPJ_G0003815.1 mouse_genomes_project 3 110826165 110833676 - 4933431E20Rik antisense antisense MGP_LPJ_T0004355.1 MGP_LPJ_G0003815.1 mouse_genomes_project 3 110827495 110833229 - 4933431E20Rik antisense antisense MGP_LPJ_T0004356.1 MGP_LPJ_G0003815.1 mouse_genomes_project 3 110828933 110833261 - 4933431E20Rik antisense antisense MGP_LPJ_T0004357.1 MGP_LPJ_G0003815.1 mouse_genomes_project 3 110830326 110833155 - 4933431E20Rik antisense antisense MGP_LPJ_T0004358.1 MGP_LPJ_G0003815.1 mouse_genomes_project 3 110830357 110833236 - 4933431E20Rik antisense antisense MGP_LPJ_T0004359.1 MGP_LPJ_G0003815.1 mouse_genomes_project 3 110830586 110833272 - 4933431E20Rik antisense antisense MGP_LPJ_T0004360.1 MGP_LPJ_G0003815.1 mouse_genomes_project 3 110830685 110833237 - 4933431E20Rik antisense antisense MGP_LPJ_T0004361.1 MGP_LPJ_G0003815.1 mouse_genomes_project 3 110830729 110833246 - 4933431E20Rik antisense antisense MGP_LPJ_T0004362.1 MGP_LPJ_G0003815.1 mouse_genomes_project 3 110830881 110833252 - 4933431E20Rik antisense antisense MGP_LPJ_T0004363.1 MGP_LPJ_G0003815.1 mouse_genomes_project 3 110830935 110833263 - 4933431E20Rik antisense antisense MGP_LPJ_T0004364.1 MGP_LPJ_G0003815.1 mouse_genomes_project 3 110830965 110833226 - 4933431E20Rik antisense antisense MGP_LPJ_T0004365.1 MGP_LPJ_G0003815.1 mouse_genomes_project 3 110831591 110833275 - 4933431E20Rik antisense antisense MGP_LPJ_T0061764.1 MGP_LPJ_G0027378.1 mouse_genomes_project 3 90754732 90765435 + MGP_LPJ_P0061764 Pmvk protein_coding protein_coding MGP_LPJ_T0061765.1 MGP_LPJ_G0027378.1 mouse_genomes_project 3 90754771 90765447 + MGP_LPJ_P0061765 Pmvk protein_coding protein_coding MGP_LPJ_T0061766.1 MGP_LPJ_G0027378.1 mouse_genomes_project 3 90754972 90765437 + MGP_LPJ_P0061766 Pmvk protein_coding protein_coding MGP_LPJ_T0014064.1 MGP_LPJ_G0012155.1 mouse_genomes_project 3 69767539 69768994 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014107.1 MGP_LPJ_G0012198.1 mouse_genomes_project 3 86079474 86080135 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007600.1 MGP_LPJ_G0006222.1 mouse_genomes_project 3 81006112 81059530 - Gm37971 lincRNA lincRNA MGP_LPJ_T0060963.1 MGP_LPJ_G0027213.1 mouse_genomes_project 3 67052636 67062225 - MGP_LPJ_P0060963 Shox2 protein_coding protein_coding MGP_LPJ_T0060964.1 MGP_LPJ_G0027213.1 mouse_genomes_project 3 67052691 67062678 - MGP_LPJ_P0060964 Shox2 protein_coding protein_coding MGP_LPJ_T0060965.1 MGP_LPJ_G0027213.1 mouse_genomes_project 3 67054559 67062169 - MGP_LPJ_P0060965 Shox2 protein_coding protein_coding MGP_LPJ_T0060966.1 MGP_LPJ_G0027213.1 mouse_genomes_project 3 67054807 67059722 - MGP_LPJ_P0060966 Shox2 protein_coding protein_coding MGP_LPJ_T0064258.1 MGP_LPJ_G0027925.1 mouse_genomes_project 3 159146168 159202566 - MGP_LPJ_P0064258 Msh4 protein_coding protein_coding MGP_LPJ_T0064259.1 MGP_LPJ_G0027925.1 mouse_genomes_project 3 159146291 159165772 - Msh4 protein_coding retained_intron MGP_LPJ_T0064260.1 MGP_LPJ_G0027925.1 mouse_genomes_project 3 159146291 159173084 - Msh4 protein_coding retained_intron MGP_LPJ_T0064261.1 MGP_LPJ_G0027925.1 mouse_genomes_project 3 159146291 159153857 - Msh4 protein_coding processed_transcript MGP_LPJ_T0064262.1 MGP_LPJ_G0027925.1 mouse_genomes_project 3 159146291 159173084 - Msh4 protein_coding retained_intron MGP_LPJ_T0064263.1 MGP_LPJ_G0027925.1 mouse_genomes_project 3 159146291 159153883 - Msh4 protein_coding retained_intron MGP_LPJ_T0064264.1 MGP_LPJ_G0027925.1 mouse_genomes_project 3 159146291 159201158 - MGP_LPJ_P0064264 Msh4 protein_coding protein_coding MGP_LPJ_T0064265.1 MGP_LPJ_G0027925.1 mouse_genomes_project 3 159146295 159201318 - MGP_LPJ_P0064265 Msh4 protein_coding protein_coding MGP_LPJ_T0007523.1 MGP_LPJ_G0006165.1 mouse_genomes_project 3 35807973 35813682 + Gm12532 lincRNA lincRNA MGP_LPJ_T0013911.1 MGP_LPJ_G0012002.1 mouse_genomes_project 3 17422564 17422780 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102105.1 MGP_LPJ_G0040142.1 mouse_genomes_project 3 92443450 92470686 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0061952.1 MGP_LPJ_G0027408.1 mouse_genomes_project 3 91948035 91972670 + S100a3 protein_coding processed_transcript MGP_LPJ_T0061953.1 MGP_LPJ_G0027408.1 mouse_genomes_project 3 91972003 91991416 + MGP_LPJ_P0061953 S100a3 protein_coding protein_coding MGP_LPJ_T0061954.1 MGP_LPJ_G0027408.1 mouse_genomes_project 3 91974296 91991462 + MGP_LPJ_P0061954 S100a3 protein_coding protein_coding MGP_LPJ_T0061956.1 MGP_LPJ_G0027408.1 mouse_genomes_project 3 91989152 91991640 + MGP_LPJ_P0061956 S100a3 protein_coding protein_coding MGP_LPJ_T0061957.1 MGP_LPJ_G0027408.1 mouse_genomes_project 3 91989182 91991640 + S100a3 protein_coding retained_intron MGP_LPJ_T0100686.1 MGP_LPJ_G0038949.1 mouse_genomes_project 3 87257229 87257360 - Gm26343 snoRNA snoRNA MGP_LPJ_T0063803.1 MGP_LPJ_G0027838.1 mouse_genomes_project 3 141050182 141192151 + Ppp3ca protein_coding processed_transcript MGP_LPJ_T0063804.1 MGP_LPJ_G0027838.1 mouse_genomes_project 3 141050182 141339669 + MGP_LPJ_P0063804 Ppp3ca protein_coding protein_coding MGP_LPJ_T0063805.1 MGP_LPJ_G0027838.1 mouse_genomes_project 3 141050828 141337777 + MGP_LPJ_P0063805 Ppp3ca protein_coding protein_coding MGP_LPJ_T0063806.1 MGP_LPJ_G0027838.1 mouse_genomes_project 3 141232541 141281379 + Ppp3ca protein_coding processed_transcript MGP_LPJ_T0063807.1 MGP_LPJ_G0027838.1 mouse_genomes_project 3 141280312 141282959 + Ppp3ca protein_coding retained_intron MGP_LPJ_T0063808.1 MGP_LPJ_G0027838.1 mouse_genomes_project 3 141287830 141289867 + Ppp3ca protein_coding retained_intron MGP_LPJ_T0063809.1 MGP_LPJ_G0027838.1 mouse_genomes_project 3 141302254 141330838 + Ppp3ca protein_coding processed_transcript MGP_LPJ_T0063810.1 MGP_LPJ_G0027838.1 mouse_genomes_project 3 141303070 141305581 + Ppp3ca protein_coding retained_intron MGP_LPJ_T0100702.1 MGP_LPJ_G0038965.1 mouse_genomes_project 3 111411019 111411143 + Gm22942 snoRNA snoRNA MGP_LPJ_T0061173.1 MGP_LPJ_G0027263.1 mouse_genomes_project 3 83159131 83185950 + MGP_LPJ_P0061173 Map9 protein_coding protein_coding MGP_LPJ_T0061174.1 MGP_LPJ_G0027263.1 mouse_genomes_project 3 83159159 83180092 + MGP_LPJ_P0061174 Map9 protein_coding protein_coding MGP_LPJ_T0061175.1 MGP_LPJ_G0027263.1 mouse_genomes_project 3 83159159 83197886 + MGP_LPJ_P0061175 Map9 protein_coding protein_coding MGP_LPJ_T0061176.1 MGP_LPJ_G0027263.1 mouse_genomes_project 3 83159257 83185886 + MGP_LPJ_P0061176 Map9 protein_coding protein_coding MGP_LPJ_T0061177.1 MGP_LPJ_G0027263.1 mouse_genomes_project 3 83159274 83197886 + MGP_LPJ_P0061177 Map9 protein_coding protein_coding MGP_LPJ_T0061178.1 MGP_LPJ_G0027263.1 mouse_genomes_project 3 83180843 83184294 + Map9 protein_coding retained_intron MGP_LPJ_T0061179.1 MGP_LPJ_G0027263.1 mouse_genomes_project 3 83181204 83185668 + MGP_LPJ_P0061179 Map9 protein_coding protein_coding MGP_LPJ_T0063819.1 MGP_LPJ_G0027842.1 mouse_genomes_project 3 142292390 142295114 + MGP_LPJ_P0063819 H2afz protein_coding protein_coding MGP_LPJ_T0063820.1 MGP_LPJ_G0027842.1 mouse_genomes_project 3 142292408 142294378 + H2afz protein_coding processed_transcript MGP_LPJ_T0063821.1 MGP_LPJ_G0027842.1 mouse_genomes_project 3 142292511 142294743 + MGP_LPJ_P0063821 H2afz protein_coding nonsense_mediated_decay MGP_LPJ_T0063822.1 MGP_LPJ_G0027842.1 mouse_genomes_project 3 142292511 142295220 + MGP_LPJ_P0063822 H2afz protein_coding protein_coding MGP_LPJ_T0063823.1 MGP_LPJ_G0027842.1 mouse_genomes_project 3 142293289 142294831 + H2afz protein_coding retained_intron MGP_LPJ_T0063824.1 MGP_LPJ_G0027842.1 mouse_genomes_project 3 142293409 142294682 + H2afz protein_coding retained_intron MGP_LPJ_T0001421.1 MGP_LPJ_G0001340.1 mouse_genomes_project 3 162148766 162150100 + TEC TEC MGP_LPJ_T0001229.1 MGP_LPJ_G0001150.1 mouse_genomes_project 3 51119416 51121983 - TEC TEC MGP_LPJ_T0062427.1 MGP_LPJ_G0027549.1 mouse_genomes_project 3 98761882 98764998 + MGP_LPJ_P0062427 Ankrd34a protein_coding protein_coding MGP_LPJ_T0102089.1 MGP_LPJ_G0040126.1 mouse_genomes_project 3 79708542 79709072 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0001224.1 MGP_LPJ_G0001146.1 mouse_genomes_project 3 50909788 50910889 + TEC TEC MGP_LPJ_T0061475.1 MGP_LPJ_G0027333.1 mouse_genomes_project 3 89608344 89631592 - MGP_LPJ_P0061475 Sema4a protein_coding protein_coding MGP_LPJ_T0061476.1 MGP_LPJ_G0027333.1 mouse_genomes_project 3 89608347 89613525 - Sema4a protein_coding retained_intron MGP_LPJ_T0061477.1 MGP_LPJ_G0027333.1 mouse_genomes_project 3 89608347 89621058 - Sema4a protein_coding retained_intron MGP_LPJ_T0061478.1 MGP_LPJ_G0027333.1 mouse_genomes_project 3 89608347 89622464 - Sema4a protein_coding retained_intron MGP_LPJ_T0061479.1 MGP_LPJ_G0027333.1 mouse_genomes_project 3 89622113 89623876 - MGP_LPJ_P0061479 Sema4a protein_coding nonsense_mediated_decay MGP_LPJ_T0061480.1 MGP_LPJ_G0027333.1 mouse_genomes_project 3 89622251 89624283 - Sema4a protein_coding retained_intron MGP_LPJ_T0061481.1 MGP_LPJ_G0027333.1 mouse_genomes_project 3 89622460 89627811 - MGP_LPJ_P0061481 Sema4a protein_coding nonsense_mediated_decay MGP_LPJ_T0061482.1 MGP_LPJ_G0027333.1 mouse_genomes_project 3 89622522 89631598 - MGP_LPJ_P0061482 Sema4a protein_coding protein_coding MGP_LPJ_T0061483.1 MGP_LPJ_G0027333.1 mouse_genomes_project 3 89622993 89631527 - MGP_LPJ_P0061483 Sema4a protein_coding nonsense_mediated_decay MGP_LPJ_T0061484.1 MGP_LPJ_G0027333.1 mouse_genomes_project 3 89623010 89631373 - MGP_LPJ_P0061484 Sema4a protein_coding protein_coding MGP_LPJ_T0061485.1 MGP_LPJ_G0027333.1 mouse_genomes_project 3 89624540 89627802 - MGP_LPJ_P0061485 Sema4a protein_coding protein_coding MGP_LPJ_T0061486.1 MGP_LPJ_G0027333.1 mouse_genomes_project 3 89625327 89627339 - Sema4a protein_coding retained_intron MGP_LPJ_T0061487.1 MGP_LPJ_G0027333.1 mouse_genomes_project 3 89625585 89628912 - MGP_LPJ_P0061487 Sema4a protein_coding protein_coding MGP_LPJ_T0061488.1 MGP_LPJ_G0027333.1 mouse_genomes_project 3 89627261 89628933 - MGP_LPJ_P0061488 Sema4a protein_coding protein_coding MGP_LPJ_T0061489.1 MGP_LPJ_G0027333.1 mouse_genomes_project 3 89628221 89628933 - Sema4a protein_coding processed_transcript MGP_LPJ_T0004308.1 MGP_LPJ_G0003785.1 mouse_genomes_project 3 96274654 96284762 - Gm43401 antisense antisense MGP_LPJ_T0013904.1 MGP_LPJ_G0011995.1 mouse_genomes_project 3 15051087 15052426 + processed_pseudogene processed_pseudogene MGP_LPJ_T0063346.1 MGP_LPJ_G0027758.1 mouse_genomes_project 3 125173573 125174957 - Slc44a3 protein_coding processed_transcript MGP_LPJ_T0063347.1 MGP_LPJ_G0027758.1 mouse_genomes_project 3 125173573 125251378 - MGP_LPJ_P0063347 Slc44a3 protein_coding protein_coding MGP_LPJ_T0063348.1 MGP_LPJ_G0027758.1 mouse_genomes_project 3 125238772 125246095 - Slc44a3 protein_coding processed_transcript MGP_LPJ_T0007500.1 MGP_LPJ_G0006147.1 mouse_genomes_project 3 28025041 28069434 + Mannr lincRNA lincRNA MGP_LPJ_T0007761.1 MGP_LPJ_G0006350.1 mouse_genomes_project 3 148436191 148521377 + Gm42705 lincRNA lincRNA MGP_LPJ_T0062836.1 MGP_LPJ_G0027641.1 mouse_genomes_project 3 107751402 107802105 - MGP_LPJ_P0062836 Cttnbp2nl protein_coding protein_coding MGP_LPJ_T0062837.1 MGP_LPJ_G0027641.1 mouse_genomes_project 3 107751404 107801910 - MGP_LPJ_P0062837 Cttnbp2nl protein_coding protein_coding MGP_LPJ_T0062838.1 MGP_LPJ_G0027641.1 mouse_genomes_project 3 107755552 107801913 - MGP_LPJ_P0062838 Cttnbp2nl protein_coding protein_coding MGP_LPJ_T0062839.1 MGP_LPJ_G0027641.1 mouse_genomes_project 3 107755582 107801884 - Cttnbp2nl protein_coding retained_intron MGP_LPJ_T0013935.1 MGP_LPJ_G0012026.1 mouse_genomes_project 3 28071766 28072205 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013912.1 MGP_LPJ_G0012003.1 mouse_genomes_project 3 17435991 17436739 + processed_pseudogene processed_pseudogene MGP_LPJ_T0063608.1 MGP_LPJ_G0027802.1 mouse_genomes_project 3 134073486 134094475 + MGP_LPJ_P0063608 Pla2g12a protein_coding protein_coding MGP_LPJ_T0063609.1 MGP_LPJ_G0027802.1 mouse_genomes_project 3 134073694 134093579 + MGP_LPJ_P0063609 Pla2g12a protein_coding nonsense_mediated_decay MGP_LPJ_T0063610.1 MGP_LPJ_G0027802.1 mouse_genomes_project 3 134076089 134093597 + MGP_LPJ_P0063610 Pla2g12a protein_coding protein_coding MGP_LPJ_T0063611.1 MGP_LPJ_G0027802.1 mouse_genomes_project 3 134090087 134094471 + Pla2g12a protein_coding retained_intron MGP_LPJ_T0060878.1 MGP_LPJ_G0027192.1 mouse_genomes_project 3 60813752 60819942 + MGP_LPJ_P0060878 P2ry1 protein_coding protein_coding MGP_LPJ_T0060879.1 MGP_LPJ_G0027192.1 mouse_genomes_project 3 60813752 60819939 + MGP_LPJ_P0060879 P2ry1 protein_coding protein_coding MGP_LPJ_T0060880.1 MGP_LPJ_G0027192.1 mouse_genomes_project 3 60813756 60815957 + MGP_LPJ_P0060880 P2ry1 protein_coding protein_coding MGP_LPJ_T0061462.1 MGP_LPJ_G0027330.1 mouse_genomes_project 3 89552372 89553298 - MGP_LPJ_P0061462 Bglap protein_coding protein_coding MGP_LPJ_T0063050.1 MGP_LPJ_G0027699.1 mouse_genomes_project 3 111243127 111323155 + MGP_LPJ_P0063050 Sort1 protein_coding protein_coding MGP_LPJ_T0063051.1 MGP_LPJ_G0027699.1 mouse_genomes_project 3 111243136 111323223 + MGP_LPJ_P0063051 Sort1 protein_coding protein_coding MGP_LPJ_T0063052.1 MGP_LPJ_G0027699.1 mouse_genomes_project 3 111317178 111323150 + Sort1 protein_coding retained_intron MGP_LPJ_T0014156.1 MGP_LPJ_G0012247.1 mouse_genomes_project 3 98837967 98838447 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007774.1 MGP_LPJ_G0006361.1 mouse_genomes_project 3 152311271 152323733 + Gm36831 lincRNA lincRNA MGP_LPJ_T0013892.1 MGP_LPJ_G0011983.1 mouse_genomes_project 3 11499085 11500442 - processed_pseudogene processed_pseudogene MGP_LPJ_T0062416.1 MGP_LPJ_G0027545.1 mouse_genomes_project 3 98685339 98689343 + MGP_LPJ_P0062416 Hfe2 protein_coding protein_coding MGP_LPJ_T0061668.1 MGP_LPJ_G0027359.1 mouse_genomes_project 3 90496567 90508964 + MGP_LPJ_P0061668 Thbs3 protein_coding protein_coding MGP_LPJ_T0061669.1 MGP_LPJ_G0027359.1 mouse_genomes_project 3 90496592 90499463 + MGP_LPJ_P0061669 Thbs3 protein_coding protein_coding MGP_LPJ_T0061670.1 MGP_LPJ_G0027359.1 mouse_genomes_project 3 90496614 90508964 + Thbs3 protein_coding retained_intron MGP_LPJ_T0061671.1 MGP_LPJ_G0027359.1 mouse_genomes_project 3 90496620 90508931 + MGP_LPJ_P0061671 Thbs3 protein_coding protein_coding MGP_LPJ_T0061672.1 MGP_LPJ_G0027359.1 mouse_genomes_project 3 90498797 90500465 + Thbs3 protein_coding retained_intron MGP_LPJ_T0061673.1 MGP_LPJ_G0027359.1 mouse_genomes_project 3 90503278 90505303 + Thbs3 protein_coding processed_transcript MGP_LPJ_T0061675.1 MGP_LPJ_G0027359.1 mouse_genomes_project 3 90506266 90507684 + Thbs3 protein_coding retained_intron MGP_LPJ_T0061676.1 MGP_LPJ_G0027359.1 mouse_genomes_project 3 90506415 90508830 + MGP_LPJ_P0061676 Thbs3 protein_coding nonsense_mediated_decay MGP_LPJ_T0061677.1 MGP_LPJ_G0027359.1 mouse_genomes_project 3 90506456 90507552 + Thbs3 protein_coding retained_intron MGP_LPJ_T0061678.1 MGP_LPJ_G0027359.1 mouse_genomes_project 3 90507303 90508690 + Thbs3 protein_coding retained_intron MGP_LPJ_T0061679.1 MGP_LPJ_G0027359.1 mouse_genomes_project 3 90508376 90508913 + Thbs3 protein_coding retained_intron MGP_LPJ_T0064385.1 MGP_LPJ_G0027943.1 mouse_genomes_project 3 163571918 163834858 - MGP_LPJ_P0064385 Lrrc7 protein_coding protein_coding MGP_LPJ_T0064386.1 MGP_LPJ_G0027943.1 mouse_genomes_project 3 163571922 164053962 - MGP_LPJ_P0064386 Lrrc7 protein_coding protein_coding MGP_LPJ_T0064387.1 MGP_LPJ_G0027943.1 mouse_genomes_project 3 163573670 163834878 - MGP_LPJ_P0064387 Lrrc7 protein_coding protein_coding MGP_LPJ_T0064388.1 MGP_LPJ_G0027943.1 mouse_genomes_project 3 163574832 164053962 - MGP_LPJ_P0064388 Lrrc7 protein_coding protein_coding MGP_LPJ_T0064389.1 MGP_LPJ_G0027943.1 mouse_genomes_project 3 163903594 164053092 - Lrrc7 protein_coding retained_intron MGP_LPJ_T0062937.1 MGP_LPJ_G0027668.1 mouse_genomes_project 3 110106061 110116490 - MGP_LPJ_P0062937 Cym protein_coding protein_coding MGP_LPJ_T0004304.1 MGP_LPJ_G0003781.1 mouse_genomes_project 3 91657932 91659313 - 4930537H20Rik antisense antisense MGP_LPJ_T0099432.1 MGP_LPJ_G0037695.1 mouse_genomes_project 3 106733852 106733954 + Gm23830 snRNA snRNA MGP_LPJ_T0013976.1 MGP_LPJ_G0012067.1 mouse_genomes_project 3 42733180 42733526 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014116.1 MGP_LPJ_G0012207.1 mouse_genomes_project 3 89024887 89034881 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004276.1 MGP_LPJ_G0003761.1 mouse_genomes_project 3 65353569 65378916 - A730090N16Rik antisense antisense MGP_LPJ_T0013994.1 MGP_LPJ_G0012085.1 mouse_genomes_project 3 49241844 49242166 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014006.1 MGP_LPJ_G0012097.1 mouse_genomes_project 3 53010841 53011307 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001426.1 MGP_LPJ_G0001345.1 mouse_genomes_project 3 163380972 163383203 - TEC TEC MGP_LPJ_T0004227.1 MGP_LPJ_G0003725.1 mouse_genomes_project 3 28165111 28202065 + Mecomos antisense antisense MGP_LPJ_T0004228.1 MGP_LPJ_G0003725.1 mouse_genomes_project 3 28171310 28176991 + Mecomos antisense antisense MGP_LPJ_T0063707.1 MGP_LPJ_G0027824.1 mouse_genomes_project 3 137579976 137653016 + MGP_LPJ_P0063707 Ppa2 protein_coding protein_coding MGP_LPJ_T0063708.1 MGP_LPJ_G0027824.1 mouse_genomes_project 3 137579988 137653173 + MGP_LPJ_P0063708 Ppa2 protein_coding protein_coding MGP_LPJ_T0063709.1 MGP_LPJ_G0027824.1 mouse_genomes_project 3 137580348 137645250 + Ppa2 protein_coding processed_transcript MGP_LPJ_T0063710.1 MGP_LPJ_G0027824.1 mouse_genomes_project 3 137591291 137596391 + Ppa2 protein_coding retained_intron MGP_LPJ_T0063711.1 MGP_LPJ_G0027824.1 mouse_genomes_project 3 137609648 137642728 + Ppa2 protein_coding processed_transcript MGP_LPJ_T0063712.1 MGP_LPJ_G0027824.1 mouse_genomes_project 3 137609821 137653020 + Ppa2 protein_coding retained_intron MGP_LPJ_T0063713.1 MGP_LPJ_G0027824.1 mouse_genomes_project 3 137618626 137653005 + MGP_LPJ_P0063713 Ppa2 protein_coding protein_coding MGP_LPJ_T0063714.1 MGP_LPJ_G0027824.1 mouse_genomes_project 3 137647216 137649250 + Ppa2 protein_coding retained_intron MGP_LPJ_T0010534.1 MGP_LPJ_G0008652.1 mouse_genomes_project 3 50509533 50509599 + Gm24282 miRNA miRNA MGP_LPJ_T0001296.1 MGP_LPJ_G0001216.1 mouse_genomes_project 3 97656906 97658511 + TEC TEC MGP_LPJ_T0004289.1 MGP_LPJ_G0003771.1 mouse_genomes_project 3 87772629 87783216 - Gm37876 antisense antisense MGP_LPJ_T0064066.1 MGP_LPJ_G0027896.1 mouse_genomes_project 3 151093499 151162475 + MGP_LPJ_P0064066 Lpar3 protein_coding protein_coding MGP_LPJ_T0100724.1 MGP_LPJ_G0038987.1 mouse_genomes_project 3 159206965 159207036 - Snord45b snoRNA snoRNA MGP_LPJ_T0014085.1 MGP_LPJ_G0012176.1 mouse_genomes_project 3 75884015 75885317 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007634.1 MGP_LPJ_G0006243.1 mouse_genomes_project 3 93834655 93842197 + Gm43740 lincRNA lincRNA MGP_LPJ_T0004290.1 MGP_LPJ_G0003772.1 mouse_genomes_project 3 89284675 89292792 - 1700113A16Rik antisense antisense MGP_LPJ_T0004291.1 MGP_LPJ_G0003772.1 mouse_genomes_project 3 89284675 89292699 - 1700113A16Rik antisense antisense MGP_LPJ_T0004292.1 MGP_LPJ_G0003772.1 mouse_genomes_project 3 89285128 89292713 - 1700113A16Rik antisense antisense MGP_LPJ_T0007684.1 MGP_LPJ_G0006286.1 mouse_genomes_project 3 119576689 119591333 + Gm26544 lincRNA lincRNA MGP_LPJ_T0059854.1 MGP_LPJ_G0026982.1 mouse_genomes_project 3 1961217 1964654 + MGP_LPJ_P0059854 Tmem254b protein_coding protein_coding MGP_LPJ_T0059856.1 MGP_LPJ_G0026982.1 mouse_genomes_project 3 1961611 1964650 + MGP_LPJ_P0059856 Tmem254b protein_coding protein_coding MGP_LPJ_T0013849.1 MGP_LPJ_G0011940.1 mouse_genomes_project 3 1022373 1022692 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099386.1 MGP_LPJ_G0037649.1 mouse_genomes_project 3 48098505 48098669 + Gm23511 snRNA snRNA MGP_LPJ_T0001165.1 MGP_LPJ_G0001087.1 mouse_genomes_project 3 28770512 28771402 - TEC TEC MGP_LPJ_T0010579.1 MGP_LPJ_G0008697.1 mouse_genomes_project 3 141192574 141192691 - Gm44327 miRNA miRNA MGP_LPJ_T0063921.1 MGP_LPJ_G0027865.1 mouse_genomes_project 3 146852132 147013782 - MGP_LPJ_P0063921 Pdlim5 protein_coding protein_coding MGP_LPJ_T0063922.1 MGP_LPJ_G0027865.1 mouse_genomes_project 3 146855216 147009153 - MGP_LPJ_P0063922 Pdlim5 protein_coding protein_coding MGP_LPJ_T0063923.1 MGP_LPJ_G0027865.1 mouse_genomes_project 3 146855216 147013667 - MGP_LPJ_P0063923 Pdlim5 protein_coding protein_coding MGP_LPJ_T0063924.1 MGP_LPJ_G0027865.1 mouse_genomes_project 3 146855216 147009153 - MGP_LPJ_P0063924 Pdlim5 protein_coding protein_coding MGP_LPJ_T0063925.1 MGP_LPJ_G0027865.1 mouse_genomes_project 3 146855216 147009153 - MGP_LPJ_P0063925 Pdlim5 protein_coding protein_coding MGP_LPJ_T0063926.1 MGP_LPJ_G0027865.1 mouse_genomes_project 3 146857003 146859103 - Pdlim5 protein_coding retained_intron MGP_LPJ_T0063927.1 MGP_LPJ_G0027865.1 mouse_genomes_project 3 146861921 146918767 - MGP_LPJ_P0063927 Pdlim5 protein_coding protein_coding MGP_LPJ_T0063928.1 MGP_LPJ_G0027865.1 mouse_genomes_project 3 146861980 146919230 - MGP_LPJ_P0063928 Pdlim5 protein_coding protein_coding MGP_LPJ_T0063929.1 MGP_LPJ_G0027865.1 mouse_genomes_project 3 146916183 147009195 - MGP_LPJ_P0063929 Pdlim5 protein_coding protein_coding MGP_LPJ_T0063930.1 MGP_LPJ_G0027865.1 mouse_genomes_project 3 146916418 147013696 - MGP_LPJ_P0063930 Pdlim5 protein_coding protein_coding MGP_LPJ_T0063931.1 MGP_LPJ_G0027865.1 mouse_genomes_project 3 146916423 147009195 - MGP_LPJ_P0063931 Pdlim5 protein_coding protein_coding MGP_LPJ_T0063932.1 MGP_LPJ_G0027865.1 mouse_genomes_project 3 146918008 147013707 - MGP_LPJ_P0063932 Pdlim5 protein_coding protein_coding MGP_LPJ_T0063933.1 MGP_LPJ_G0027865.1 mouse_genomes_project 3 146918115 147013785 - MGP_LPJ_P0063933 Pdlim5 protein_coding protein_coding MGP_LPJ_T0102124.1 MGP_LPJ_G0040161.1 mouse_genomes_project 3 116429248 116439599 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0004381.1 MGP_LPJ_G0003828.1 mouse_genomes_project 3 126213266 126245798 - Gm42836 antisense antisense MGP_LPJ_T0014111.1 MGP_LPJ_G0012202.1 mouse_genomes_project 3 87235422 87235768 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098417.1 MGP_LPJ_G0036698.1 mouse_genomes_project 3 89885445 89885573 + Gm25820 scaRNA scaRNA MGP_LPJ_T0001169.1 MGP_LPJ_G0001091.1 mouse_genomes_project 3 30827818 30828835 + TEC TEC MGP_LPJ_T0004220.1 MGP_LPJ_G0003720.1 mouse_genomes_project 3 13319996 13321157 + antisense antisense MGP_LPJ_T0014309.1 MGP_LPJ_G0012400.1 mouse_genomes_project 3 144709219 144710859 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001410.1 MGP_LPJ_G0001329.1 mouse_genomes_project 3 157612115 157613525 - TEC TEC MGP_LPJ_T0063736.1 MGP_LPJ_G0027829.1 mouse_genomes_project 3 139592020 139616671 + MGP_LPJ_P0063736 Bdh2 protein_coding protein_coding MGP_LPJ_T0063737.1 MGP_LPJ_G0027829.1 mouse_genomes_project 3 139592060 139616671 + MGP_LPJ_P0063737 Bdh2 protein_coding protein_coding MGP_LPJ_T0063738.1 MGP_LPJ_G0027829.1 mouse_genomes_project 3 139592082 139595214 + Bdh2 protein_coding retained_intron MGP_LPJ_T0063739.1 MGP_LPJ_G0027829.1 mouse_genomes_project 3 139599397 139616668 + Bdh2 protein_coding processed_transcript MGP_LPJ_T0059836.1 MGP_LPJ_G0026977.1 mouse_genomes_project 3 1892487 1899586 - MGP_LPJ_P0059836 protein_coding protein_coding MGP_LPJ_T0059837.1 MGP_LPJ_G0026977.1 mouse_genomes_project 3 1893666 1902963 - MGP_LPJ_P0059837 protein_coding protein_coding MGP_LPJ_T0059838.1 MGP_LPJ_G0026977.1 mouse_genomes_project 3 1893857 1903281 - MGP_LPJ_P0059838 protein_coding protein_coding MGP_LPJ_T0059839.1 MGP_LPJ_G0026977.1 mouse_genomes_project 3 1895059 1901991 - protein_coding processed_transcript MGP_LPJ_T0059842.1 MGP_LPJ_G0026977.1 mouse_genomes_project 3 1895797 1902325 - MGP_LPJ_P0059842 protein_coding protein_coding MGP_LPJ_T0007590.1 MGP_LPJ_G0006215.1 mouse_genomes_project 3 74447014 74456887 - Gm20356 lincRNA lincRNA MGP_LPJ_T0007594.1 MGP_LPJ_G0006218.1 mouse_genomes_project 3 76448332 76493969 + Gm37256 lincRNA lincRNA MGP_LPJ_T0061235.1 MGP_LPJ_G0027278.1 mouse_genomes_project 3 85333458 85373867 - MGP_LPJ_P0061235 Fhdc1 protein_coding protein_coding MGP_LPJ_T0061236.1 MGP_LPJ_G0027278.1 mouse_genomes_project 3 85335298 85372932 - MGP_LPJ_P0061236 Fhdc1 protein_coding protein_coding MGP_LPJ_T0061237.1 MGP_LPJ_G0027278.1 mouse_genomes_project 3 85335371 85373831 - MGP_LPJ_P0061237 Fhdc1 protein_coding protein_coding MGP_LPJ_T0061238.1 MGP_LPJ_G0027278.1 mouse_genomes_project 3 85340067 85344951 - Fhdc1 protein_coding retained_intron MGP_LPJ_T0061239.1 MGP_LPJ_G0027278.1 mouse_genomes_project 3 85367947 85372423 - Fhdc1 protein_coding processed_transcript MGP_LPJ_T0062409.1 MGP_LPJ_G0027540.1 mouse_genomes_project 3 98367019 98367767 + MGP_LPJ_P0062409 Hist2h3c2 protein_coding protein_coding MGP_LPJ_T0017967.1 MGP_LPJ_G0015445.1 mouse_genomes_project 3 154003866 154005813 + Gm43572 processed_transcript processed_transcript MGP_LPJ_T0062834.1 MGP_LPJ_G0027640.1 mouse_genomes_project 3 107691356 107708277 - MGP_LPJ_P0062834 Wnt2b protein_coding protein_coding MGP_LPJ_T0062835.1 MGP_LPJ_G0027640.1 mouse_genomes_project 3 107706768 107708077 - Wnt2b protein_coding retained_intron MGP_LPJ_T0004341.1 MGP_LPJ_G0003807.1 mouse_genomes_project 3 105359643 105362655 - antisense antisense MGP_LPJ_T0098246.1 MGP_LPJ_G0036527.1 mouse_genomes_project 3 23467016 23467151 + Gm24250 rRNA rRNA MGP_LPJ_T0064240.1 MGP_LPJ_G0027921.1 mouse_genomes_project 3 157954171 158036344 + MGP_LPJ_P0064240 Pigk protein_coding protein_coding MGP_LPJ_T0064241.1 MGP_LPJ_G0027921.1 mouse_genomes_project 3 157954177 157987455 + Pigk protein_coding retained_intron MGP_LPJ_T0064242.1 MGP_LPJ_G0027921.1 mouse_genomes_project 3 157954184 158085778 + MGP_LPJ_P0064242 Pigk protein_coding nonsense_mediated_decay MGP_LPJ_T0064243.1 MGP_LPJ_G0027921.1 mouse_genomes_project 3 157954184 158033086 + MGP_LPJ_P0064243 Pigk protein_coding protein_coding MGP_LPJ_T0064244.1 MGP_LPJ_G0027921.1 mouse_genomes_project 3 157954191 158230881 + MGP_LPJ_P0064244 Pigk protein_coding nonsense_mediated_decay MGP_LPJ_T0064245.1 MGP_LPJ_G0027921.1 mouse_genomes_project 3 157954194 158032817 + MGP_LPJ_P0064245 Pigk protein_coding nonsense_mediated_decay MGP_LPJ_T0064246.1 MGP_LPJ_G0027921.1 mouse_genomes_project 3 157984340 157986495 + Pigk protein_coding processed_transcript MGP_LPJ_T0064247.1 MGP_LPJ_G0027921.1 mouse_genomes_project 3 157984559 158033012 + MGP_LPJ_P0064247 Pigk protein_coding nonsense_mediated_decay MGP_LPJ_T0064248.1 MGP_LPJ_G0027921.1 mouse_genomes_project 3 158009765 158012946 + Pigk protein_coding processed_transcript MGP_LPJ_T0061282.1 MGP_LPJ_G0027291.1 mouse_genomes_project 3 87529811 87532264 - MGP_LPJ_P0061282 Mab21l2 protein_coding protein_coding MGP_LPJ_T0061283.1 MGP_LPJ_G0027291.1 mouse_genomes_project 3 87530030 87532610 - Mab21l2 protein_coding processed_pseudogene MGP_LPJ_T0061431.1 MGP_LPJ_G0027324.1 mouse_genomes_project 3 89471036 89477327 + MGP_LPJ_P0061431 Glmp protein_coding protein_coding MGP_LPJ_T0061432.1 MGP_LPJ_G0027324.1 mouse_genomes_project 3 89471068 89475525 + Glmp protein_coding retained_intron MGP_LPJ_T0061433.1 MGP_LPJ_G0027324.1 mouse_genomes_project 3 89471071 89472592 + Glmp protein_coding retained_intron MGP_LPJ_T0061434.1 MGP_LPJ_G0027324.1 mouse_genomes_project 3 89471073 89473601 + Glmp protein_coding retained_intron MGP_LPJ_T0061435.1 MGP_LPJ_G0027324.1 mouse_genomes_project 3 89471085 89472481 + MGP_LPJ_P0061435 Glmp protein_coding nonsense_mediated_decay MGP_LPJ_T0061436.1 MGP_LPJ_G0027324.1 mouse_genomes_project 3 89471095 89474382 + MGP_LPJ_P0061436 Glmp protein_coding protein_coding MGP_LPJ_T0061437.1 MGP_LPJ_G0027324.1 mouse_genomes_project 3 89471095 89474377 + MGP_LPJ_P0061437 Glmp protein_coding protein_coding MGP_LPJ_T0061438.1 MGP_LPJ_G0027324.1 mouse_genomes_project 3 89471095 89474382 + MGP_LPJ_P0061438 Glmp protein_coding protein_coding MGP_LPJ_T0061439.1 MGP_LPJ_G0027324.1 mouse_genomes_project 3 89472057 89474332 + Glmp protein_coding retained_intron MGP_LPJ_T0061440.1 MGP_LPJ_G0027324.1 mouse_genomes_project 3 89474086 89474595 + MGP_LPJ_P0061440 Glmp protein_coding protein_coding MGP_LPJ_T0004306.1 MGP_LPJ_G0003783.1 mouse_genomes_project 3 93775550 93781676 + Gm43735 antisense antisense MGP_LPJ_T0014065.1 MGP_LPJ_G0012156.1 mouse_genomes_project 3 69857445 69857842 + processed_pseudogene processed_pseudogene MGP_LPJ_T0064390.1 MGP_LPJ_G0027944.1 mouse_genomes_project 3 165005883 165040961 + MGP_LPJ_P0064390 Depdc1a protein_coding protein_coding MGP_LPJ_T0064391.1 MGP_LPJ_G0027944.1 mouse_genomes_project 3 165005901 165040582 + MGP_LPJ_P0064391 Depdc1a protein_coding protein_coding MGP_LPJ_T0064392.1 MGP_LPJ_G0027944.1 mouse_genomes_project 3 165005908 165040465 + MGP_LPJ_P0064392 Depdc1a protein_coding protein_coding MGP_LPJ_T0062264.1 MGP_LPJ_G0027512.1 mouse_genomes_project 3 97354368 97394382 - Setdb1 protein_coding retained_intron MGP_LPJ_T0062265.1 MGP_LPJ_G0027512.1 mouse_genomes_project 3 97354368 97389983 - MGP_LPJ_P0062265 Setdb1 protein_coding protein_coding MGP_LPJ_T0062266.1 MGP_LPJ_G0027512.1 mouse_genomes_project 3 97354368 97389981 - MGP_LPJ_P0062266 Setdb1 protein_coding protein_coding MGP_LPJ_T0062267.1 MGP_LPJ_G0027512.1 mouse_genomes_project 3 97354368 97394383 - MGP_LPJ_P0062267 Setdb1 protein_coding protein_coding MGP_LPJ_T0062268.1 MGP_LPJ_G0027512.1 mouse_genomes_project 3 97370278 97394383 - Setdb1 protein_coding retained_intron MGP_LPJ_T0062269.1 MGP_LPJ_G0027512.1 mouse_genomes_project 3 97388559 97394316 - Setdb1 protein_coding retained_intron MGP_LPJ_T0059954.1 MGP_LPJ_G0027012.1 mouse_genomes_project 3 12312191 12317202 - MGP_LPJ_P0059954 1810022K09Rik protein_coding protein_coding MGP_LPJ_T0059955.1 MGP_LPJ_G0027012.1 mouse_genomes_project 3 12312196 12317138 - MGP_LPJ_P0059955 1810022K09Rik protein_coding protein_coding MGP_LPJ_T0059956.1 MGP_LPJ_G0027012.1 mouse_genomes_project 3 12312196 12317178 - MGP_LPJ_P0059956 1810022K09Rik protein_coding protein_coding MGP_LPJ_T0059957.1 MGP_LPJ_G0027012.1 mouse_genomes_project 3 12312200 12317171 - MGP_LPJ_P0059957 1810022K09Rik protein_coding protein_coding MGP_LPJ_T0059958.1 MGP_LPJ_G0027012.1 mouse_genomes_project 3 12315100 12317160 - 1810022K09Rik protein_coding retained_intron MGP_LPJ_T0007507.1 MGP_LPJ_G0006153.1 mouse_genomes_project 3 32858842 32860510 + Gm43208 lincRNA lincRNA MGP_LPJ_T0017965.1 MGP_LPJ_G0015443.1 mouse_genomes_project 3 147529657 147546056 + Gm43646 processed_transcript processed_transcript MGP_LPJ_T0061923.1 MGP_LPJ_G0027402.1 mouse_genomes_project 3 91867516 91869918 - Snapin protein_coding retained_intron MGP_LPJ_T0061924.1 MGP_LPJ_G0027402.1 mouse_genomes_project 3 91867524 91870523 - MGP_LPJ_P0061924 Snapin protein_coding protein_coding MGP_LPJ_T0061925.1 MGP_LPJ_G0027402.1 mouse_genomes_project 3 91867860 91870483 - MGP_LPJ_P0061925 Snapin protein_coding nonsense_mediated_decay MGP_LPJ_T0061926.1 MGP_LPJ_G0027402.1 mouse_genomes_project 3 91867863 91870514 - MGP_LPJ_P0061926 Snapin protein_coding nonsense_mediated_decay MGP_LPJ_T0061927.1 MGP_LPJ_G0027402.1 mouse_genomes_project 3 91868489 91870282 - Snapin protein_coding retained_intron MGP_LPJ_T0059923.1 MGP_LPJ_G0027003.1 mouse_genomes_project 3 7818895 7833740 - MGP_LPJ_P0059923 Gm38303 protein_coding nonsense_mediated_decay MGP_LPJ_T0010565.1 MGP_LPJ_G0008683.1 mouse_genomes_project 3 120823227 120823292 + Gm22408 miRNA miRNA MGP_LPJ_T0013993.1 MGP_LPJ_G0012084.1 mouse_genomes_project 3 49007806 49008269 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013910.1 MGP_LPJ_G0012001.1 mouse_genomes_project 3 16575928 16576217 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004410.1 MGP_LPJ_G0003850.1 mouse_genomes_project 3 142647932 142676915 - 0610031O16Rik antisense antisense MGP_LPJ_T0004411.1 MGP_LPJ_G0003850.1 mouse_genomes_project 3 142654996 142676915 - 0610031O16Rik antisense antisense MGP_LPJ_T0004412.1 MGP_LPJ_G0003850.1 mouse_genomes_project 3 142663739 142676931 - 0610031O16Rik antisense antisense MGP_LPJ_T0004413.1 MGP_LPJ_G0003850.1 mouse_genomes_project 3 142666246 142677657 - 0610031O16Rik antisense antisense MGP_LPJ_T0062754.1 MGP_LPJ_G0027625.1 mouse_genomes_project 3 106440915 106456731 + MGP_LPJ_P0062754 protein_coding protein_coding MGP_LPJ_T0062756.1 MGP_LPJ_G0027625.1 mouse_genomes_project 3 106440988 106456536 + MGP_LPJ_P0062756 protein_coding protein_coding MGP_LPJ_T0062757.1 MGP_LPJ_G0027625.1 mouse_genomes_project 3 106440995 106456731 + MGP_LPJ_P0062757 protein_coding protein_coding MGP_LPJ_T0062758.1 MGP_LPJ_G0027625.1 mouse_genomes_project 3 106441023 106456733 + MGP_LPJ_P0062758 protein_coding protein_coding MGP_LPJ_T0062759.1 MGP_LPJ_G0027625.1 mouse_genomes_project 3 106441231 106456469 + MGP_LPJ_P0062759 protein_coding protein_coding MGP_LPJ_T0062760.1 MGP_LPJ_G0027625.1 mouse_genomes_project 3 106441259 106446283 + protein_coding processed_transcript MGP_LPJ_T0062761.1 MGP_LPJ_G0027625.1 mouse_genomes_project 3 106446472 106455392 + MGP_LPJ_P0062761 protein_coding nonsense_mediated_decay MGP_LPJ_T0001327.1 MGP_LPJ_G0001247.1 mouse_genomes_project 3 122133978 122137435 + TEC TEC MGP_LPJ_T0062884.1 MGP_LPJ_G0027654.1 mouse_genomes_project 3 108809964 108817956 - MGP_LPJ_P0062884 Chil5 protein_coding protein_coding MGP_LPJ_T0062885.1 MGP_LPJ_G0027654.1 mouse_genomes_project 3 108810010 108817961 - MGP_LPJ_P0062885 Chil5 protein_coding nonsense_mediated_decay MGP_LPJ_T0062886.1 MGP_LPJ_G0027654.1 mouse_genomes_project 3 108810177 108824886 - MGP_LPJ_P0062886 Chil5 protein_coding protein_coding MGP_LPJ_T0062793.1 MGP_LPJ_G0027632.1 mouse_genomes_project 3 107051735 107122789 - MGP_LPJ_P0062793 Lrig2 protein_coding protein_coding MGP_LPJ_T0062794.1 MGP_LPJ_G0027632.1 mouse_genomes_project 3 107115273 107180435 - MGP_LPJ_P0062794 Lrig2 protein_coding protein_coding MGP_LPJ_T0062795.1 MGP_LPJ_G0027632.1 mouse_genomes_project 3 107115274 107180423 - MGP_LPJ_P0062795 Lrig2 protein_coding protein_coding MGP_LPJ_T0062796.1 MGP_LPJ_G0027632.1 mouse_genomes_project 3 107117848 107145324 - Lrig2 protein_coding retained_intron MGP_LPJ_T0062797.1 MGP_LPJ_G0027632.1 mouse_genomes_project 3 107118406 107180451 - MGP_LPJ_P0062797 Lrig2 protein_coding protein_coding MGP_LPJ_T0062798.1 MGP_LPJ_G0027632.1 mouse_genomes_project 3 107118622 107180513 - Lrig2 protein_coding retained_intron MGP_LPJ_T0062799.1 MGP_LPJ_G0027632.1 mouse_genomes_project 3 107120483 107126007 - Lrig2 protein_coding retained_intron MGP_LPJ_T0062800.1 MGP_LPJ_G0027632.1 mouse_genomes_project 3 107146725 107180256 - Lrig2 protein_coding retained_intron MGP_LPJ_T0062801.1 MGP_LPJ_G0027632.1 mouse_genomes_project 3 107157907 107158941 - Lrig2 protein_coding retained_intron MGP_LPJ_T0061862.1 MGP_LPJ_G0027391.1 mouse_genomes_project 3 91573112 91573892 - MGP_LPJ_P0061862 protein_coding protein_coding MGP_LPJ_T0061863.1 MGP_LPJ_G0027391.1 mouse_genomes_project 3 91573253 91574206 - MGP_LPJ_P0061863 protein_coding protein_coding MGP_LPJ_T0061864.1 MGP_LPJ_G0027391.1 mouse_genomes_project 3 91573257 91574224 - protein_coding retained_intron MGP_LPJ_T0061865.1 MGP_LPJ_G0027391.1 mouse_genomes_project 3 91573257 91574225 - protein_coding retained_intron MGP_LPJ_T0061866.1 MGP_LPJ_G0027391.1 mouse_genomes_project 3 91573261 91574214 - protein_coding retained_intron MGP_LPJ_T0061867.1 MGP_LPJ_G0027391.1 mouse_genomes_project 3 91573261 91574239 - MGP_LPJ_P0061867 protein_coding protein_coding MGP_LPJ_T0061868.1 MGP_LPJ_G0027391.1 mouse_genomes_project 3 91573417 91574237 - protein_coding retained_intron MGP_LPJ_T0061869.1 MGP_LPJ_G0027391.1 mouse_genomes_project 3 91573649 91574236 - protein_coding retained_intron MGP_LPJ_T0014207.1 MGP_LPJ_G0012298.1 mouse_genomes_project 3 113466941 113467584 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062095.1 MGP_LPJ_G0027484.1 mouse_genomes_project 3 96495482 96699046 - MGP_LPJ_P0062095 Tuft1 protein_coding protein_coding MGP_LPJ_T0062096.1 MGP_LPJ_G0027484.1 mouse_genomes_project 3 96495484 96699047 - MGP_LPJ_P0062096 Tuft1 protein_coding protein_coding MGP_LPJ_T0062097.1 MGP_LPJ_G0027484.1 mouse_genomes_project 3 96495721 96698975 - MGP_LPJ_P0062097 Tuft1 protein_coding protein_coding MGP_LPJ_T0062098.1 MGP_LPJ_G0027484.1 mouse_genomes_project 3 96496893 96498068 - Tuft1 protein_coding retained_intron MGP_LPJ_T0062099.1 MGP_LPJ_G0027484.1 mouse_genomes_project 3 96507001 96698975 - MGP_LPJ_P0062099 Tuft1 protein_coding protein_coding MGP_LPJ_T0010573.1 MGP_LPJ_G0008691.1 mouse_genomes_project 3 131586419 131586485 + Mir302d miRNA miRNA MGP_LPJ_T0001194.1 MGP_LPJ_G0001116.1 mouse_genomes_project 3 38378519 38381506 + TEC TEC MGP_LPJ_T0010557.1 MGP_LPJ_G0008675.1 mouse_genomes_project 3 97129953 97130080 - Mir8099-1 miRNA miRNA MGP_LPJ_T0001173.1 MGP_LPJ_G0001095.1 mouse_genomes_project 3 31802490 31803956 - TEC TEC MGP_LPJ_T0102118.1 MGP_LPJ_G0040155.1 mouse_genomes_project 3 108966309 108967653 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0062038.1 MGP_LPJ_G0027470.1 mouse_genomes_project 3 95213425 95216652 + MGP_LPJ_P0062038 Tchhl1 protein_coding protein_coding MGP_LPJ_T0004249.1 MGP_LPJ_G0003739.1 mouse_genomes_project 3 35965895 35980448 - Fgf2os antisense antisense MGP_LPJ_T0061547.1 MGP_LPJ_G0027341.1 mouse_genomes_project 3 89843780 89845025 - MGP_LPJ_P0061547 Rxfp4 protein_coding protein_coding MGP_LPJ_T0102088.1 MGP_LPJ_G0040125.1 mouse_genomes_project 3 70810447 70811482 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0004397.1 MGP_LPJ_G0003842.1 mouse_genomes_project 3 135576693 135591756 + 4930534D22Rik antisense antisense MGP_LPJ_T0004342.1 MGP_LPJ_G0003808.1 mouse_genomes_project 3 106399898 106402366 + Gm15886 antisense antisense MGP_LPJ_T0004343.1 MGP_LPJ_G0003808.1 mouse_genomes_project 3 106399919 106417622 + Gm15886 antisense antisense MGP_LPJ_T0004344.1 MGP_LPJ_G0003808.1 mouse_genomes_project 3 106400254 106405928 + Gm15886 antisense antisense MGP_LPJ_T0004345.1 MGP_LPJ_G0003808.1 mouse_genomes_project 3 106405346 106406339 + Gm15886 antisense antisense MGP_LPJ_T0059845.1 MGP_LPJ_G0026979.1 mouse_genomes_project 3 1932491 1946335 - MGP_LPJ_P0059845 protein_coding protein_coding MGP_LPJ_T0059850.1 MGP_LPJ_G0026979.1 mouse_genomes_project 3 1933894 1947052 - protein_coding processed_transcript MGP_LPJ_T0014088.1 MGP_LPJ_G0012179.1 mouse_genomes_project 3 77429744 77430574 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007726.1 MGP_LPJ_G0006319.1 mouse_genomes_project 3 137926307 137943439 - Gm42563 lincRNA lincRNA MGP_LPJ_T0007558.1 MGP_LPJ_G0006190.1 mouse_genomes_project 3 51810447 51844546 + Gm30173 lincRNA lincRNA MGP_LPJ_T0062554.1 MGP_LPJ_G0027580.1 mouse_genomes_project 3 100965380 100974215 - MGP_LPJ_P0062554 protein_coding protein_coding MGP_LPJ_T0010584.1 MGP_LPJ_G0008702.1 mouse_genomes_project 3 151286222 151286308 - Gm22901 miRNA miRNA MGP_LPJ_T0013878.1 MGP_LPJ_G0011969.1 mouse_genomes_project 3 7722053 7722185 + processed_pseudogene processed_pseudogene MGP_LPJ_T0060686.1 MGP_LPJ_G0027150.1 mouse_genomes_project 3 54095058 54132449 + MGP_LPJ_P0060686 Supt20 protein_coding protein_coding MGP_LPJ_T0060687.1 MGP_LPJ_G0027150.1 mouse_genomes_project 3 54095074 54132575 + MGP_LPJ_P0060687 Supt20 protein_coding protein_coding MGP_LPJ_T0060688.1 MGP_LPJ_G0027150.1 mouse_genomes_project 3 54095074 54132575 + MGP_LPJ_P0060688 Supt20 protein_coding protein_coding MGP_LPJ_T0060689.1 MGP_LPJ_G0027150.1 mouse_genomes_project 3 54095076 54132579 + MGP_LPJ_P0060689 Supt20 protein_coding nonsense_mediated_decay MGP_LPJ_T0060690.1 MGP_LPJ_G0027150.1 mouse_genomes_project 3 54095086 54109760 + MGP_LPJ_P0060690 Supt20 protein_coding protein_coding MGP_LPJ_T0060691.1 MGP_LPJ_G0027150.1 mouse_genomes_project 3 54095109 54115626 + Supt20 protein_coding retained_intron MGP_LPJ_T0060692.1 MGP_LPJ_G0027150.1 mouse_genomes_project 3 54095109 54097698 + Supt20 protein_coding retained_intron MGP_LPJ_T0060693.1 MGP_LPJ_G0027150.1 mouse_genomes_project 3 54095109 54098662 + Supt20 protein_coding retained_intron MGP_LPJ_T0060694.1 MGP_LPJ_G0027150.1 mouse_genomes_project 3 54095113 54109991 + MGP_LPJ_P0060694 Supt20 protein_coding protein_coding MGP_LPJ_T0060695.1 MGP_LPJ_G0027150.1 mouse_genomes_project 3 54095356 54119711 + MGP_LPJ_P0060695 Supt20 protein_coding protein_coding MGP_LPJ_T0060696.1 MGP_LPJ_G0027150.1 mouse_genomes_project 3 54095364 54132576 + MGP_LPJ_P0060696 Supt20 protein_coding nonsense_mediated_decay MGP_LPJ_T0060697.1 MGP_LPJ_G0027150.1 mouse_genomes_project 3 54115111 54117227 + Supt20 protein_coding retained_intron MGP_LPJ_T0013902.1 MGP_LPJ_G0011993.1 mouse_genomes_project 3 13850424 13850599 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100703.1 MGP_LPJ_G0038966.1 mouse_genomes_project 3 115408275 115408401 - Gm25519 snoRNA snoRNA MGP_LPJ_T0063404.1 MGP_LPJ_G0027768.1 mouse_genomes_project 3 126524952 126665411 + MGP_LPJ_P0063404 Pde5a protein_coding protein_coding MGP_LPJ_T0063405.1 MGP_LPJ_G0027768.1 mouse_genomes_project 3 126525575 126665409 + MGP_LPJ_P0063405 Pde5a protein_coding protein_coding MGP_LPJ_T0063406.1 MGP_LPJ_G0027768.1 mouse_genomes_project 3 126526227 126574107 + Pde5a protein_coding retained_intron MGP_LPJ_T0060570.1 MGP_LPJ_G0027127.1 mouse_genomes_project 3 44317942 44322578 + MGP_LPJ_P0060570 Pcdh10 protein_coding protein_coding MGP_LPJ_T0060571.1 MGP_LPJ_G0027127.1 mouse_genomes_project 3 44317950 44342043 + MGP_LPJ_P0060571 Pcdh10 protein_coding protein_coding MGP_LPJ_T0060572.1 MGP_LPJ_G0027127.1 mouse_genomes_project 3 44317969 44377753 + MGP_LPJ_P0060572 Pcdh10 protein_coding protein_coding MGP_LPJ_T0060573.1 MGP_LPJ_G0027127.1 mouse_genomes_project 3 44317971 44365302 + MGP_LPJ_P0060573 Pcdh10 protein_coding protein_coding MGP_LPJ_T0060574.1 MGP_LPJ_G0027127.1 mouse_genomes_project 3 44322175 44374623 + Pcdh10 protein_coding processed_transcript MGP_LPJ_T0013861.1 MGP_LPJ_G0011952.1 mouse_genomes_project 3 3922114 3922373 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060855.1 MGP_LPJ_G0027190.1 mouse_genomes_project 3 59793560 59799208 + MGP_LPJ_P0060855 Sucnr1 protein_coding protein_coding MGP_LPJ_T0060856.1 MGP_LPJ_G0027190.1 mouse_genomes_project 3 59793593 59797967 + Sucnr1 protein_coding processed_transcript MGP_LPJ_T0017944.1 MGP_LPJ_G0015437.1 mouse_genomes_project 3 122015889 122019513 + Gm26871 processed_transcript lincRNA MGP_LPJ_T0017945.1 MGP_LPJ_G0015437.1 mouse_genomes_project 3 122019350 122108720 + Gm26871 processed_transcript lincRNA MGP_LPJ_T0017946.1 MGP_LPJ_G0015437.1 mouse_genomes_project 3 122019475 122110797 + Gm26871 processed_transcript lincRNA MGP_LPJ_T0017947.1 MGP_LPJ_G0015437.1 mouse_genomes_project 3 122019486 122065656 + Gm26871 processed_transcript lincRNA MGP_LPJ_T0017948.1 MGP_LPJ_G0015437.1 mouse_genomes_project 3 122019519 122125575 + Gm26871 processed_transcript lincRNA MGP_LPJ_T0017949.1 MGP_LPJ_G0015437.1 mouse_genomes_project 3 122050066 122053114 + Gm26871 processed_transcript retained_intron MGP_LPJ_T0060628.1 MGP_LPJ_G0027138.1 mouse_genomes_project 3 50897355 50921609 + Mgst2 protein_coding processed_transcript MGP_LPJ_T0060629.1 MGP_LPJ_G0027138.1 mouse_genomes_project 3 50898176 50914995 + Mgst2 protein_coding processed_transcript MGP_LPJ_T0060630.1 MGP_LPJ_G0027138.1 mouse_genomes_project 3 50898177 50922478 + MGP_LPJ_P0060630 Mgst2 protein_coding protein_coding MGP_LPJ_T0060631.1 MGP_LPJ_G0027138.1 mouse_genomes_project 3 50898212 50922478 + MGP_LPJ_P0060631 Mgst2 protein_coding protein_coding MGP_LPJ_T0060632.1 MGP_LPJ_G0027138.1 mouse_genomes_project 3 50898223 50922472 + MGP_LPJ_P0060632 Mgst2 protein_coding protein_coding MGP_LPJ_T0060633.1 MGP_LPJ_G0027138.1 mouse_genomes_project 3 50908444 50922474 + Mgst2 protein_coding processed_transcript MGP_LPJ_T0060634.1 MGP_LPJ_G0027138.1 mouse_genomes_project 3 50908896 50922321 + Mgst2 protein_coding processed_transcript MGP_LPJ_T0060635.1 MGP_LPJ_G0027138.1 mouse_genomes_project 3 50913061 50922477 + Mgst2 protein_coding retained_intron MGP_LPJ_T0060636.1 MGP_LPJ_G0027138.1 mouse_genomes_project 3 50921418 50922480 + Mgst2 protein_coding retained_intron MGP_LPJ_T0061961.1 MGP_LPJ_G0027412.1 mouse_genomes_project 3 91997473 92000731 + MGP_LPJ_P0061961 S100a5 protein_coding protein_coding MGP_LPJ_T0061962.1 MGP_LPJ_G0027412.1 mouse_genomes_project 3 91998760 92000731 + MGP_LPJ_P0061962 S100a5 protein_coding protein_coding MGP_LPJ_T0061905.1 MGP_LPJ_G0027399.1 mouse_genomes_project 3 91764783 91808272 - MGP_LPJ_P0061905 Ints3 protein_coding protein_coding MGP_LPJ_T0061906.1 MGP_LPJ_G0027399.1 mouse_genomes_project 3 91764791 91808498 - MGP_LPJ_P0061906 Ints3 protein_coding protein_coding MGP_LPJ_T0061907.1 MGP_LPJ_G0027399.1 mouse_genomes_project 3 91765471 91776595 - Ints3 protein_coding retained_intron MGP_LPJ_T0061908.1 MGP_LPJ_G0027399.1 mouse_genomes_project 3 91765471 91808582 - MGP_LPJ_P0061908 Ints3 protein_coding protein_coding MGP_LPJ_T0061909.1 MGP_LPJ_G0027399.1 mouse_genomes_project 3 91767762 91774156 - Ints3 protein_coding retained_intron MGP_LPJ_T0061910.1 MGP_LPJ_G0027399.1 mouse_genomes_project 3 91774485 91776055 - Ints3 protein_coding retained_intron MGP_LPJ_T0061911.1 MGP_LPJ_G0027399.1 mouse_genomes_project 3 91781274 91808591 - Ints3 protein_coding retained_intron MGP_LPJ_T0011560.1 MGP_LPJ_G0009678.1 mouse_genomes_project 3 98569003 98569426 - Terc misc_RNA misc_RNA MGP_LPJ_T0063937.1 MGP_LPJ_G0027867.1 mouse_genomes_project 3 147149310 147166256 + MGP_LPJ_P0063937 Gbp7 protein_coding protein_coding MGP_LPJ_T0063938.1 MGP_LPJ_G0027867.1 mouse_genomes_project 3 147149310 147169353 + MGP_LPJ_P0063938 Gbp7 protein_coding protein_coding MGP_LPJ_T0061385.1 MGP_LPJ_G0027313.1 mouse_genomes_project 3 89088417 89102514 - MGP_LPJ_P0061385 Bcan protein_coding protein_coding MGP_LPJ_T0061386.1 MGP_LPJ_G0027313.1 mouse_genomes_project 3 89093400 89096747 - Bcan protein_coding retained_intron MGP_LPJ_T0061387.1 MGP_LPJ_G0027313.1 mouse_genomes_project 3 89093400 89100147 - Bcan protein_coding retained_intron MGP_LPJ_T0061388.1 MGP_LPJ_G0027313.1 mouse_genomes_project 3 89094480 89098657 - Bcan protein_coding retained_intron MGP_LPJ_T0061389.1 MGP_LPJ_G0027313.1 mouse_genomes_project 3 89098736 89099557 - Bcan protein_coding retained_intron MGP_LPJ_T0061390.1 MGP_LPJ_G0027313.1 mouse_genomes_project 3 89099424 89101918 - MGP_LPJ_P0061390 Bcan protein_coding protein_coding MGP_LPJ_T0004269.1 MGP_LPJ_G0003756.1 mouse_genomes_project 3 60812596 60814744 - Gm37035 antisense antisense MGP_LPJ_T0063852.1 MGP_LPJ_G0027850.1 mouse_genomes_project 3 142587136 142599504 + protein_coding retained_intron MGP_LPJ_T0063853.1 MGP_LPJ_G0027850.1 mouse_genomes_project 3 142587466 142592042 + MGP_LPJ_P0063853 protein_coding protein_coding MGP_LPJ_T0063854.1 MGP_LPJ_G0027850.1 mouse_genomes_project 3 142587528 142592144 + MGP_LPJ_P0063854 protein_coding protein_coding MGP_LPJ_T0063855.1 MGP_LPJ_G0027850.1 mouse_genomes_project 3 142587549 142600629 + MGP_LPJ_P0063855 protein_coding unknown_likely_coding MGP_LPJ_T0063856.1 MGP_LPJ_G0027850.1 mouse_genomes_project 3 142587577 142594161 + MGP_LPJ_P0063856 protein_coding protein_coding MGP_LPJ_T0061245.1 MGP_LPJ_G0027282.1 mouse_genomes_project 3 85573025 85618539 + MGP_LPJ_P0061245 Tmem154 protein_coding protein_coding MGP_LPJ_T0061246.1 MGP_LPJ_G0027282.1 mouse_genomes_project 3 85573043 85593622 + Tmem154 protein_coding retained_intron MGP_LPJ_T0061247.1 MGP_LPJ_G0027282.1 mouse_genomes_project 3 85573203 85593513 + Tmem154 protein_coding processed_transcript MGP_LPJ_T0061248.1 MGP_LPJ_G0027282.1 mouse_genomes_project 3 85599709 85602072 + Tmem154 protein_coding retained_intron MGP_LPJ_T0007565.1 MGP_LPJ_G0006196.1 mouse_genomes_project 3 53281513 53300343 + Gm31026 lincRNA lincRNA MGP_LPJ_T0013931.1 MGP_LPJ_G0012022.1 mouse_genomes_project 3 25268955 25269343 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007512.1 MGP_LPJ_G0006158.1 mouse_genomes_project 3 33168912 33187792 - Gm3143 lincRNA lincRNA MGP_LPJ_T0007513.1 MGP_LPJ_G0006158.1 mouse_genomes_project 3 33180752 33187794 - Gm3143 lincRNA lincRNA MGP_LPJ_T0014341.1 MGP_LPJ_G0012432.1 mouse_genomes_project 3 164468403 164469400 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014283.1 MGP_LPJ_G0012374.1 mouse_genomes_project 3 139465926 139466602 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062301.1 MGP_LPJ_G0027520.1 mouse_genomes_project 3 97752950 97767110 - MGP_LPJ_P0062301 Adamtsl4 protein_coding protein_coding MGP_LPJ_T0062302.1 MGP_LPJ_G0027520.1 mouse_genomes_project 3 97752953 97767051 - MGP_LPJ_P0062302 Adamtsl4 protein_coding protein_coding MGP_LPJ_T0062303.1 MGP_LPJ_G0027520.1 mouse_genomes_project 3 97753499 97753901 - Adamtsl4 protein_coding processed_transcript MGP_LPJ_T0062304.1 MGP_LPJ_G0027520.1 mouse_genomes_project 3 97755770 97756839 - Adamtsl4 protein_coding processed_transcript MGP_LPJ_T0062305.1 MGP_LPJ_G0027520.1 mouse_genomes_project 3 97763649 97767058 - MGP_LPJ_P0062305 Adamtsl4 protein_coding protein_coding MGP_LPJ_T0062003.1 MGP_LPJ_G0027443.1 mouse_genomes_project 3 94345483 94347186 - MGP_LPJ_P0062003 Lce1a2 protein_coding protein_coding MGP_LPJ_T0063755.1 MGP_LPJ_G0027832.1 mouse_genomes_project 3 139724253 139741037 - MGP_LPJ_P0063755 Cisd2 protein_coding protein_coding MGP_LPJ_T0063756.1 MGP_LPJ_G0027832.1 mouse_genomes_project 3 139727896 139740519 - MGP_LPJ_P0063756 Cisd2 protein_coding protein_coding MGP_LPJ_T0063757.1 MGP_LPJ_G0027832.1 mouse_genomes_project 3 139737061 139740516 - Cisd2 protein_coding retained_intron MGP_LPJ_T0063758.1 MGP_LPJ_G0027832.1 mouse_genomes_project 3 139737967 139740191 - Cisd2 protein_coding processed_transcript MGP_LPJ_T0098547.1 MGP_LPJ_G0036821.1 mouse_genomes_project 3 103061533 103066747 - Gm43466 sense_intronic sense_intronic MGP_LPJ_T0007606.1 MGP_LPJ_G0006228.1 mouse_genomes_project 3 83734533 83816777 - Gm30097 lincRNA lincRNA MGP_LPJ_T0007607.1 MGP_LPJ_G0006228.1 mouse_genomes_project 3 83734635 83802562 - Gm30097 lincRNA lincRNA MGP_LPJ_T0007631.1 MGP_LPJ_G0006241.1 mouse_genomes_project 3 91332234 91334800 + Gm19710 lincRNA lincRNA MGP_LPJ_T0007632.1 MGP_LPJ_G0006241.1 mouse_genomes_project 3 91334589 91354913 + Gm19710 lincRNA lincRNA MGP_LPJ_T0062443.1 MGP_LPJ_G0027554.1 mouse_genomes_project 3 98817305 98836151 + MGP_LPJ_P0062443 Itga10 protein_coding protein_coding MGP_LPJ_T0062444.1 MGP_LPJ_G0027554.1 mouse_genomes_project 3 98817305 98836145 + MGP_LPJ_P0062444 Itga10 protein_coding protein_coding MGP_LPJ_T0062445.1 MGP_LPJ_G0027554.1 mouse_genomes_project 3 98829122 98834760 + Itga10 protein_coding retained_intron MGP_LPJ_T0062493.1 MGP_LPJ_G0027565.1 mouse_genomes_project 3 99346421 99364492 + MGP_LPJ_P0062493 Acp6 protein_coding protein_coding MGP_LPJ_T0062494.1 MGP_LPJ_G0027565.1 mouse_genomes_project 3 99346740 99348040 + Acp6 protein_coding retained_intron MGP_LPJ_T0062495.1 MGP_LPJ_G0027565.1 mouse_genomes_project 3 99346747 99356226 + Acp6 protein_coding retained_intron MGP_LPJ_T0062496.1 MGP_LPJ_G0027565.1 mouse_genomes_project 3 99346747 99354962 + Acp6 protein_coding retained_intron MGP_LPJ_T0062497.1 MGP_LPJ_G0027565.1 mouse_genomes_project 3 99355292 99356368 + Acp6 protein_coding retained_intron MGP_LPJ_T0062498.1 MGP_LPJ_G0027565.1 mouse_genomes_project 3 99356009 99361779 + Acp6 protein_coding retained_intron MGP_LPJ_T0062499.1 MGP_LPJ_G0027565.1 mouse_genomes_project 3 99359065 99361808 + Acp6 protein_coding retained_intron MGP_LPJ_T0062500.1 MGP_LPJ_G0027565.1 mouse_genomes_project 3 99360557 99364436 + Acp6 protein_coding retained_intron MGP_LPJ_T0062501.1 MGP_LPJ_G0027565.1 mouse_genomes_project 3 99361918 99365217 + Acp6 protein_coding retained_intron MGP_LPJ_T0004278.1 MGP_LPJ_G0003763.1 mouse_genomes_project 3 66011155 66015434 + Gm37305 antisense antisense MGP_LPJ_T0102087.1 MGP_LPJ_G0040124.1 mouse_genomes_project 3 64770775 64771672 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0007685.1 MGP_LPJ_G0006287.1 mouse_genomes_project 3 119629522 119631828 + Gm43202 lincRNA lincRNA MGP_LPJ_T0013940.1 MGP_LPJ_G0012031.1 mouse_genomes_project 3 31275227 31275962 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001433.1 MGP_LPJ_G0001352.1 mouse_genomes_project 3 165409499 165411870 + TEC TEC MGP_LPJ_T0001184.1 MGP_LPJ_G0001106.1 mouse_genomes_project 3 35856889 35857367 + TEC TEC MGP_LPJ_T0017909.1 MGP_LPJ_G0015423.1 mouse_genomes_project 3 89315923 89318782 + AW047730 processed_transcript processed_transcript MGP_LPJ_T0017910.1 MGP_LPJ_G0015423.1 mouse_genomes_project 3 89315935 89318782 + AW047730 processed_transcript processed_transcript MGP_LPJ_T0099414.1 MGP_LPJ_G0037677.1 mouse_genomes_project 3 90104965 90105127 + Gm23054 snRNA snRNA MGP_LPJ_T0001345.1 MGP_LPJ_G0001265.1 mouse_genomes_project 3 128283740 128283986 - TEC TEC MGP_LPJ_T0062894.1 MGP_LPJ_G0027658.1 mouse_genomes_project 3 109225560 109242429 - MGP_LPJ_P0062894 Chil6 protein_coding protein_coding MGP_LPJ_T0062002.1 MGP_LPJ_G0027442.1 mouse_genomes_project 3 94332475 94333782 - MGP_LPJ_P0062002 Lce1b protein_coding protein_coding MGP_LPJ_T0007604.1 MGP_LPJ_G0006226.1 mouse_genomes_project 3 83561739 83566943 + Gm30043 lincRNA lincRNA MGP_LPJ_T0011554.1 MGP_LPJ_G0009672.1 mouse_genomes_project 3 72627883 72627974 + Gm27465 misc_RNA misc_RNA MGP_LPJ_T0102080.1 MGP_LPJ_G0040117.1 mouse_genomes_project 3 19450886 19452585 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013929.1 MGP_LPJ_G0012020.1 mouse_genomes_project 3 25001274 25001385 + processed_pseudogene processed_pseudogene MGP_LPJ_T0063217.1 MGP_LPJ_G0027734.1 mouse_genomes_project 3 119533568 119553141 - MGP_LPJ_P0063217 Vcam1 protein_coding protein_coding MGP_LPJ_T0063218.1 MGP_LPJ_G0027734.1 mouse_genomes_project 3 119540082 119544170 - Vcam1 protein_coding retained_intron MGP_LPJ_T0063219.1 MGP_LPJ_G0027734.1 mouse_genomes_project 3 119545758 119552910 - MGP_LPJ_P0063219 Vcam1 protein_coding protein_coding MGP_LPJ_T0063220.1 MGP_LPJ_G0027734.1 mouse_genomes_project 3 119548096 119552389 - MGP_LPJ_P0063220 Vcam1 protein_coding protein_coding MGP_LPJ_T0064149.1 MGP_LPJ_G0027910.1 mouse_genomes_project 3 156913445 156932799 - MGP_LPJ_P0064149 Ifi44 protein_coding protein_coding MGP_LPJ_T0064150.1 MGP_LPJ_G0027910.1 mouse_genomes_project 3 156914949 156932721 - Ifi44 protein_coding processed_transcript MGP_LPJ_T0064151.1 MGP_LPJ_G0027910.1 mouse_genomes_project 3 156928529 156932786 - Ifi44 protein_coding retained_intron MGP_LPJ_T0064152.1 MGP_LPJ_G0027910.1 mouse_genomes_project 3 156928630 156932742 - Ifi44 protein_coding processed_transcript MGP_LPJ_T0063470.1 MGP_LPJ_G0027783.1 mouse_genomes_project 3 129797697 129870531 - MGP_LPJ_P0063470 Ugt8a protein_coding protein_coding MGP_LPJ_T0063471.1 MGP_LPJ_G0027783.1 mouse_genomes_project 3 129797930 129846261 - MGP_LPJ_P0063471 Ugt8a protein_coding protein_coding MGP_LPJ_T0063472.1 MGP_LPJ_G0027783.1 mouse_genomes_project 3 129844641 129870463 - Ugt8a protein_coding retained_intron MGP_LPJ_T0063175.1 MGP_LPJ_G0027725.1 mouse_genomes_project 3 116557140 116575237 - MGP_LPJ_P0063175 Amy2a1 protein_coding protein_coding MGP_LPJ_T0102123.1 MGP_LPJ_G0040160.1 mouse_genomes_project 3 110979146 110980908 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013867.1 MGP_LPJ_G0011958.1 mouse_genomes_project 3 5548546 5550398 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062001.1 MGP_LPJ_G0027441.1 mouse_genomes_project 3 94321422 94324247 - MGP_LPJ_P0062001 Lce1a1 protein_coding protein_coding MGP_LPJ_T0061636.1 MGP_LPJ_G0027356.1 mouse_genomes_project 3 90462657 90464194 + MGP_LPJ_P0061636 Fam189b protein_coding protein_coding MGP_LPJ_T0061637.1 MGP_LPJ_G0027356.1 mouse_genomes_project 3 90462717 90468782 + MGP_LPJ_P0061637 Fam189b protein_coding protein_coding MGP_LPJ_T0061638.1 MGP_LPJ_G0027356.1 mouse_genomes_project 3 90462718 90468780 + MGP_LPJ_P0061638 Fam189b protein_coding nonsense_mediated_decay MGP_LPJ_T0061639.1 MGP_LPJ_G0027356.1 mouse_genomes_project 3 90463094 90468781 + MGP_LPJ_P0061639 Fam189b protein_coding nonsense_mediated_decay MGP_LPJ_T0061640.1 MGP_LPJ_G0027356.1 mouse_genomes_project 3 90463147 90468779 + MGP_LPJ_P0061640 Fam189b protein_coding protein_coding MGP_LPJ_T0061641.1 MGP_LPJ_G0027356.1 mouse_genomes_project 3 90463155 90468786 + MGP_LPJ_P0061641 Fam189b protein_coding protein_coding MGP_LPJ_T0061642.1 MGP_LPJ_G0027356.1 mouse_genomes_project 3 90463743 90465284 + Fam189b protein_coding retained_intron MGP_LPJ_T0061643.1 MGP_LPJ_G0027356.1 mouse_genomes_project 3 90466866 90467968 + Fam189b protein_coding retained_intron MGP_LPJ_T0061644.1 MGP_LPJ_G0027356.1 mouse_genomes_project 3 90467424 90467967 + Fam189b protein_coding retained_intron MGP_LPJ_T0061645.1 MGP_LPJ_G0027356.1 mouse_genomes_project 3 90467474 90468271 + Fam189b protein_coding processed_transcript MGP_LPJ_T0061981.1 MGP_LPJ_G0027424.1 mouse_genomes_project 3 93978470 93979936 + MGP_LPJ_P0061981 Sprr2b protein_coding protein_coding MGP_LPJ_T0060074.1 MGP_LPJ_G0027043.1 mouse_genomes_project 3 23342829 24310031 - MGP_LPJ_P0060074 Nlgn1 protein_coding protein_coding MGP_LPJ_T0060075.1 MGP_LPJ_G0027043.1 mouse_genomes_project 3 23349111 24098857 - MGP_LPJ_P0060075 Nlgn1 protein_coding protein_coding MGP_LPJ_T0060076.1 MGP_LPJ_G0027043.1 mouse_genomes_project 3 23349111 24098857 - MGP_LPJ_P0060076 Nlgn1 protein_coding protein_coding MGP_LPJ_T0060077.1 MGP_LPJ_G0027043.1 mouse_genomes_project 3 23350731 24123195 - MGP_LPJ_P0060077 Nlgn1 protein_coding protein_coding MGP_LPJ_T0060078.1 MGP_LPJ_G0027043.1 mouse_genomes_project 3 24096792 24309441 - Nlgn1 protein_coding retained_intron MGP_LPJ_T0013865.1 MGP_LPJ_G0011956.1 mouse_genomes_project 3 4781929 4782945 + processed_pseudogene processed_pseudogene MGP_LPJ_T0061040.1 MGP_LPJ_G0027230.1 mouse_genomes_project 3 69392542 69393742 + MGP_LPJ_P0061040 Arl14 protein_coding protein_coding MGP_LPJ_T0062868.1 MGP_LPJ_G0027650.1 mouse_genomes_project 3 108733973 108751375 - MGP_LPJ_P0062868 Atp5f1 protein_coding protein_coding MGP_LPJ_T0062869.1 MGP_LPJ_G0027650.1 mouse_genomes_project 3 108733977 108750552 - MGP_LPJ_P0062869 Atp5f1 protein_coding nonsense_mediated_decay MGP_LPJ_T0062870.1 MGP_LPJ_G0027650.1 mouse_genomes_project 3 108734173 108745457 - MGP_LPJ_P0062870 Atp5f1 protein_coding protein_coding MGP_LPJ_T0062871.1 MGP_LPJ_G0027650.1 mouse_genomes_project 3 108744944 108750540 - Atp5f1 protein_coding retained_intron MGP_LPJ_T0062872.1 MGP_LPJ_G0027650.1 mouse_genomes_project 3 108745102 108747282 - Atp5f1 protein_coding retained_intron MGP_LPJ_T0062873.1 MGP_LPJ_G0027650.1 mouse_genomes_project 3 108749866 108750522 - Atp5f1 protein_coding retained_intron MGP_LPJ_T0063958.1 MGP_LPJ_G0027872.1 mouse_genomes_project 3 147405974 147425405 + MGP_LPJ_P0063958 Gtf2b protein_coding protein_coding MGP_LPJ_T0063959.1 MGP_LPJ_G0027872.1 mouse_genomes_project 3 147406152 147409344 + Gtf2b protein_coding retained_intron MGP_LPJ_T0061464.1 MGP_LPJ_G0027331.1 mouse_genomes_project 3 89564928 89581199 - MGP_LPJ_P0061464 Pmf1 protein_coding protein_coding MGP_LPJ_T0061465.1 MGP_LPJ_G0027331.1 mouse_genomes_project 3 89564928 89581194 - MGP_LPJ_P0061465 Pmf1 protein_coding protein_coding MGP_LPJ_T0061466.1 MGP_LPJ_G0027331.1 mouse_genomes_project 3 89565164 89581133 - Pmf1 protein_coding processed_transcript MGP_LPJ_T0061467.1 MGP_LPJ_G0027331.1 mouse_genomes_project 3 89566528 89567506 - Pmf1 protein_coding retained_intron MGP_LPJ_T0061468.1 MGP_LPJ_G0027331.1 mouse_genomes_project 3 89566853 89581154 - MGP_LPJ_P0061468 Pmf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0061469.1 MGP_LPJ_G0027331.1 mouse_genomes_project 3 89568150 89570496 - Pmf1 protein_coding retained_intron MGP_LPJ_T0061470.1 MGP_LPJ_G0027331.1 mouse_genomes_project 3 89570318 89581176 - Pmf1 protein_coding retained_intron MGP_LPJ_T0061184.1 MGP_LPJ_G0027265.1 mouse_genomes_project 3 83646058 83686817 - MGP_LPJ_P0061184 Rbm46 protein_coding protein_coding MGP_LPJ_T0061185.1 MGP_LPJ_G0027265.1 mouse_genomes_project 3 83646645 83676973 - MGP_LPJ_P0061185 Rbm46 protein_coding protein_coding MGP_LPJ_T0061186.1 MGP_LPJ_G0027265.1 mouse_genomes_project 3 83646648 83676973 - MGP_LPJ_P0061186 Rbm46 protein_coding protein_coding MGP_LPJ_T0004389.1 MGP_LPJ_G0003835.1 mouse_genomes_project 3 131598182 131599515 - Gm43729 antisense antisense MGP_LPJ_T0010553.1 MGP_LPJ_G0008671.1 mouse_genomes_project 3 93670900 93671010 - Gm23697 miRNA miRNA MGP_LPJ_T0063389.1 MGP_LPJ_G0027766.1 mouse_genomes_project 3 126067780 126213972 + Bcar3 protein_coding retained_intron MGP_LPJ_T0063390.1 MGP_LPJ_G0027766.1 mouse_genomes_project 3 126206628 126213690 + Bcar3 protein_coding retained_intron MGP_LPJ_T0063391.1 MGP_LPJ_G0027766.1 mouse_genomes_project 3 126206649 126320604 + MGP_LPJ_P0063391 Bcar3 protein_coding protein_coding MGP_LPJ_T0063392.1 MGP_LPJ_G0027766.1 mouse_genomes_project 3 126206694 126260703 + Bcar3 protein_coding processed_transcript MGP_LPJ_T0063393.1 MGP_LPJ_G0027766.1 mouse_genomes_project 3 126274378 126298971 + MGP_LPJ_P0063393 Bcar3 protein_coding protein_coding MGP_LPJ_T0063394.1 MGP_LPJ_G0027766.1 mouse_genomes_project 3 126295201 126298972 + MGP_LPJ_P0063394 Bcar3 protein_coding protein_coding MGP_LPJ_T0063395.1 MGP_LPJ_G0027766.1 mouse_genomes_project 3 126298586 126303260 + Bcar3 protein_coding retained_intron MGP_LPJ_T0063396.1 MGP_LPJ_G0027766.1 mouse_genomes_project 3 126301641 126303448 + MGP_LPJ_P0063396 Bcar3 protein_coding protein_coding MGP_LPJ_T0063397.1 MGP_LPJ_G0027766.1 mouse_genomes_project 3 126302734 126313625 + MGP_LPJ_P0063397 Bcar3 protein_coding protein_coding MGP_LPJ_T0063398.1 MGP_LPJ_G0027766.1 mouse_genomes_project 3 126315060 126315819 + Bcar3 protein_coding retained_intron MGP_LPJ_T0064058.1 MGP_LPJ_G0027894.1 mouse_genomes_project 3 150976983 150985778 + MGP_LPJ_P0064058 Mcoln3 protein_coding protein_coding MGP_LPJ_T0064059.1 MGP_LPJ_G0027894.1 mouse_genomes_project 3 150981171 151002665 + MGP_LPJ_P0064059 Mcoln3 protein_coding protein_coding MGP_LPJ_T0064060.1 MGP_LPJ_G0027894.1 mouse_genomes_project 3 150999938 151001522 + Mcoln3 protein_coding retained_intron MGP_LPJ_T0100663.1 MGP_LPJ_G0038926.1 mouse_genomes_project 3 38558502 38558587 - Gm23831 snoRNA snoRNA MGP_LPJ_T0060374.1 MGP_LPJ_G0027096.1 mouse_genomes_project 3 35022118 35053875 - MGP_LPJ_P0060374 Anxa5 protein_coding protein_coding MGP_LPJ_T0060375.1 MGP_LPJ_G0027096.1 mouse_genomes_project 3 35022359 35025516 - Anxa5 protein_coding retained_intron MGP_LPJ_T0060376.1 MGP_LPJ_G0027096.1 mouse_genomes_project 3 35025392 35053640 - MGP_LPJ_P0060376 Anxa5 protein_coding protein_coding MGP_LPJ_T0001269.1 MGP_LPJ_G0001189.1 mouse_genomes_project 3 66145622 66146731 + TEC TEC MGP_LPJ_T0001332.1 MGP_LPJ_G0001252.1 mouse_genomes_project 3 125136400 125139739 - TEC TEC MGP_LPJ_T0007771.1 MGP_LPJ_G0006358.1 mouse_genomes_project 3 150900940 150902910 + Gm43861 lincRNA lincRNA MGP_LPJ_T0001329.1 MGP_LPJ_G0001249.1 mouse_genomes_project 3 123378838 123381888 - TEC TEC MGP_LPJ_T0099425.1 MGP_LPJ_G0037688.1 mouse_genomes_project 3 97079070 97079177 + Gm22301 snRNA snRNA MGP_LPJ_T0017935.1 MGP_LPJ_G0015435.1 mouse_genomes_project 3 112138292 112140655 - Gm43223 processed_transcript lincRNA MGP_LPJ_T0017936.1 MGP_LPJ_G0015435.1 mouse_genomes_project 3 112138301 112140433 - Gm43223 processed_transcript processed_transcript MGP_LPJ_T0001205.1 MGP_LPJ_G0001127.1 mouse_genomes_project 3 44389911 44393049 + TEC TEC MGP_LPJ_T0013928.1 MGP_LPJ_G0012019.1 mouse_genomes_project 3 24357038 24359005 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007655.1 MGP_LPJ_G0006263.1 mouse_genomes_project 3 104234449 104242891 + Gm43135 lincRNA lincRNA MGP_LPJ_T0060246.1 MGP_LPJ_G0027077.1 mouse_genomes_project 3 30906765 30956548 + MGP_LPJ_P0060246 Mfn1 protein_coding protein_coding MGP_LPJ_T0060247.1 MGP_LPJ_G0027077.1 mouse_genomes_project 3 30906831 30924327 + Mfn1 protein_coding retained_intron MGP_LPJ_T0060248.1 MGP_LPJ_G0027077.1 mouse_genomes_project 3 30906839 30924040 + MGP_LPJ_P0060248 Mfn1 protein_coding protein_coding MGP_LPJ_T0060249.1 MGP_LPJ_G0027077.1 mouse_genomes_project 3 30908841 30921478 + MGP_LPJ_P0060249 Mfn1 protein_coding protein_coding MGP_LPJ_T0060250.1 MGP_LPJ_G0027077.1 mouse_genomes_project 3 30908850 30954666 + MGP_LPJ_P0060250 Mfn1 protein_coding protein_coding MGP_LPJ_T0060251.1 MGP_LPJ_G0027077.1 mouse_genomes_project 3 30923875 30940535 + Mfn1 protein_coding retained_intron MGP_LPJ_T0060252.1 MGP_LPJ_G0027077.1 mouse_genomes_project 3 30931496 30940804 + Mfn1 protein_coding retained_intron MGP_LPJ_T0060253.1 MGP_LPJ_G0027077.1 mouse_genomes_project 3 30938947 30947755 + MGP_LPJ_P0060253 Mfn1 protein_coding protein_coding MGP_LPJ_T0060254.1 MGP_LPJ_G0027077.1 mouse_genomes_project 3 30940308 30941202 + Mfn1 protein_coding retained_intron MGP_LPJ_T0060255.1 MGP_LPJ_G0027077.1 mouse_genomes_project 3 30951607 30954470 + Mfn1 protein_coding retained_intron MGP_LPJ_T0014204.1 MGP_LPJ_G0012295.1 mouse_genomes_project 3 112202716 112203581 - processed_pseudogene processed_pseudogene MGP_LPJ_T0062615.1 MGP_LPJ_G0027599.1 mouse_genomes_project 3 103545877 103618257 - MGP_LPJ_P0062615 Ptgfrn protein_coding protein_coding MGP_LPJ_T0062616.1 MGP_LPJ_G0027599.1 mouse_genomes_project 3 103568029 103581630 - Ptgfrn protein_coding processed_transcript MGP_LPJ_T0062617.1 MGP_LPJ_G0027599.1 mouse_genomes_project 3 103582116 103586902 - Ptgfrn protein_coding retained_intron MGP_LPJ_T0059966.1 MGP_LPJ_G0027016.1 mouse_genomes_project 3 12635870 12646480 + MGP_LPJ_P0059966 Car2 protein_coding protein_coding MGP_LPJ_T0059967.1 MGP_LPJ_G0027016.1 mouse_genomes_project 3 12636025 12652116 + MGP_LPJ_P0059967 Car2 protein_coding protein_coding MGP_LPJ_T0059968.1 MGP_LPJ_G0027016.1 mouse_genomes_project 3 12636236 12638164 + Car2 protein_coding retained_intron MGP_LPJ_T0001290.1 MGP_LPJ_G0001210.1 mouse_genomes_project 3 89932320 89933260 - TEC TEC MGP_LPJ_T0100692.1 MGP_LPJ_G0038955.1 mouse_genomes_project 3 91480672 91480804 + Gm23723 snoRNA snoRNA MGP_LPJ_T0007530.1 MGP_LPJ_G0006171.1 mouse_genomes_project 3 37061723 37066045 + Gm42920 lincRNA lincRNA MGP_LPJ_T0063407.1 MGP_LPJ_G0027769.1 mouse_genomes_project 3 126701743 126706176 + MGP_LPJ_P0063407 Fabp2 protein_coding protein_coding MGP_LPJ_T0014076.1 MGP_LPJ_G0012167.1 mouse_genomes_project 3 72162914 72163878 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014110.1 MGP_LPJ_G0012201.1 mouse_genomes_project 3 87116374 87116807 - processed_pseudogene processed_pseudogene MGP_LPJ_T0061980.1 MGP_LPJ_G0027423.1 mouse_genomes_project 3 93797997 93805749 - MGP_LPJ_P0061980 Lelp1 protein_coding protein_coding MGP_LPJ_T0059941.1 MGP_LPJ_G0027009.1 mouse_genomes_project 3 12165066 12191224 + MGP_LPJ_P0059941 Slc7a12 protein_coding protein_coding MGP_LPJ_T0059942.1 MGP_LPJ_G0027009.1 mouse_genomes_project 3 12165069 12191118 + MGP_LPJ_P0059942 Slc7a12 protein_coding protein_coding MGP_LPJ_T0059943.1 MGP_LPJ_G0027009.1 mouse_genomes_project 3 12165142 12191118 + MGP_LPJ_P0059943 Slc7a12 protein_coding protein_coding MGP_LPJ_T0063580.1 MGP_LPJ_G0027797.1 mouse_genomes_project 3 133853599 133935853 - MGP_LPJ_P0063580 Egf protein_coding protein_coding MGP_LPJ_T0063581.1 MGP_LPJ_G0027797.1 mouse_genomes_project 3 133853612 133905346 - MGP_LPJ_P0063581 Egf protein_coding protein_coding MGP_LPJ_T0063582.1 MGP_LPJ_G0027797.1 mouse_genomes_project 3 133853614 133905336 - MGP_LPJ_P0063582 Egf protein_coding protein_coding MGP_LPJ_T0063583.1 MGP_LPJ_G0027797.1 mouse_genomes_project 3 133854371 133857599 - Egf protein_coding retained_intron MGP_LPJ_T0063584.1 MGP_LPJ_G0027797.1 mouse_genomes_project 3 133862305 133872585 - Egf protein_coding retained_intron MGP_LPJ_T0063585.1 MGP_LPJ_G0027797.1 mouse_genomes_project 3 133871866 133874779 - Egf protein_coding retained_intron MGP_LPJ_T0063586.1 MGP_LPJ_G0027797.1 mouse_genomes_project 3 133878962 133905345 - MGP_LPJ_P0063586 Egf protein_coding nonsense_mediated_decay MGP_LPJ_T0063587.1 MGP_LPJ_G0027797.1 mouse_genomes_project 3 133915707 133935853 - Egf protein_coding retained_intron MGP_LPJ_T0063588.1 MGP_LPJ_G0027797.1 mouse_genomes_project 3 133917179 133935853 - Egf protein_coding processed_transcript MGP_LPJ_T0064358.1 MGP_LPJ_G0027941.1 mouse_genomes_project 3 163495970 163525685 - MGP_LPJ_P0064358 Srsf11 protein_coding protein_coding MGP_LPJ_T0064359.1 MGP_LPJ_G0027941.1 mouse_genomes_project 3 163496141 163510094 - Srsf11 protein_coding retained_intron MGP_LPJ_T0064360.1 MGP_LPJ_G0027941.1 mouse_genomes_project 3 163496416 163520812 - MGP_LPJ_P0064360 Srsf11 protein_coding protein_coding MGP_LPJ_T0064361.1 MGP_LPJ_G0027941.1 mouse_genomes_project 3 163497000 163509812 - Srsf11 protein_coding retained_intron MGP_LPJ_T0064362.1 MGP_LPJ_G0027941.1 mouse_genomes_project 3 163497366 163525597 - MGP_LPJ_P0064362 Srsf11 protein_coding protein_coding MGP_LPJ_T0064363.1 MGP_LPJ_G0027941.1 mouse_genomes_project 3 163497391 163498018 - Srsf11 protein_coding retained_intron MGP_LPJ_T0064364.1 MGP_LPJ_G0027941.1 mouse_genomes_project 3 163497840 163498645 - Srsf11 protein_coding retained_intron MGP_LPJ_T0064365.1 MGP_LPJ_G0027941.1 mouse_genomes_project 3 163497848 163508676 - MGP_LPJ_P0064365 Srsf11 protein_coding protein_coding MGP_LPJ_T0064366.1 MGP_LPJ_G0027941.1 mouse_genomes_project 3 163500660 163510341 - Srsf11 protein_coding retained_intron MGP_LPJ_T0064367.1 MGP_LPJ_G0027941.1 mouse_genomes_project 3 163502992 163504785 - Srsf11 protein_coding retained_intron MGP_LPJ_T0064368.1 MGP_LPJ_G0027941.1 mouse_genomes_project 3 163506061 163525642 - MGP_LPJ_P0064368 Srsf11 protein_coding nonsense_mediated_decay MGP_LPJ_T0064369.1 MGP_LPJ_G0027941.1 mouse_genomes_project 3 163506101 163525661 - MGP_LPJ_P0064369 Srsf11 protein_coding protein_coding MGP_LPJ_T0064370.1 MGP_LPJ_G0027941.1 mouse_genomes_project 3 163508684 163520501 - MGP_LPJ_P0064370 Srsf11 protein_coding nonsense_mediated_decay MGP_LPJ_T0064371.1 MGP_LPJ_G0027941.1 mouse_genomes_project 3 163509601 163520617 - MGP_LPJ_P0064371 Srsf11 protein_coding nonsense_mediated_decay MGP_LPJ_T0064372.1 MGP_LPJ_G0027941.1 mouse_genomes_project 3 163510080 163525652 - Srsf11 protein_coding retained_intron MGP_LPJ_T0064373.1 MGP_LPJ_G0027941.1 mouse_genomes_project 3 163511408 163525657 - Srsf11 protein_coding retained_intron MGP_LPJ_T0064374.1 MGP_LPJ_G0027941.1 mouse_genomes_project 3 163513197 163520806 - Srsf11 protein_coding retained_intron MGP_LPJ_T0064375.1 MGP_LPJ_G0027941.1 mouse_genomes_project 3 163516850 163520800 - Srsf11 protein_coding retained_intron MGP_LPJ_T0064376.1 MGP_LPJ_G0027941.1 mouse_genomes_project 3 163519863 163525660 - Srsf11 protein_coding retained_intron MGP_LPJ_T0062890.1 MGP_LPJ_G0027656.1 mouse_genomes_project 3 108935768 108973448 - MGP_LPJ_P0062890 Chil3 protein_coding protein_coding MGP_LPJ_T0062891.1 MGP_LPJ_G0027656.1 mouse_genomes_project 3 108936811 108937996 - MGP_LPJ_P0062891 Chil3 protein_coding protein_coding MGP_LPJ_T0062892.1 MGP_LPJ_G0027656.1 mouse_genomes_project 3 108944753 108950203 - Chil3 protein_coding retained_intron MGP_LPJ_T0098593.1 MGP_LPJ_G0036867.1 mouse_genomes_project 3 149220852 149224039 - Gm43707 sense_intronic sense_intronic MGP_LPJ_T0062043.1 MGP_LPJ_G0027473.1 mouse_genomes_project 3 96187617 96209906 + MGP_LPJ_P0062043 Them4 protein_coding protein_coding MGP_LPJ_T0062044.1 MGP_LPJ_G0027473.1 mouse_genomes_project 3 96187658 96195696 + Them4 protein_coding retained_intron MGP_LPJ_T0062045.1 MGP_LPJ_G0027473.1 mouse_genomes_project 3 96187664 96203565 + Them4 protein_coding retained_intron MGP_LPJ_T0063023.1 MGP_LPJ_G0027691.1 mouse_genomes_project 3 111044404 111053103 + MGP_LPJ_P0063023 Gnat2 protein_coding protein_coding MGP_LPJ_T0063024.1 MGP_LPJ_G0027691.1 mouse_genomes_project 3 111044495 111048000 + MGP_LPJ_P0063024 Gnat2 protein_coding protein_coding MGP_LPJ_T0063025.1 MGP_LPJ_G0027691.1 mouse_genomes_project 3 111044753 111050088 + MGP_LPJ_P0063025 Gnat2 protein_coding protein_coding MGP_LPJ_T0063026.1 MGP_LPJ_G0027691.1 mouse_genomes_project 3 111044807 111053101 + Gnat2 protein_coding retained_intron MGP_LPJ_T0063027.1 MGP_LPJ_G0027691.1 mouse_genomes_project 3 111046063 111050103 + MGP_LPJ_P0063027 Gnat2 protein_coding protein_coding MGP_LPJ_T0063028.1 MGP_LPJ_G0027691.1 mouse_genomes_project 3 111048913 111052962 + Gnat2 protein_coding processed_transcript MGP_LPJ_T0060391.1 MGP_LPJ_G0027100.1 mouse_genomes_project 3 35159485 35206352 - MGP_LPJ_P0060391 Bbs7 protein_coding protein_coding MGP_LPJ_T0060392.1 MGP_LPJ_G0027100.1 mouse_genomes_project 3 35159485 35206440 - MGP_LPJ_P0060392 Bbs7 protein_coding protein_coding MGP_LPJ_T0060393.1 MGP_LPJ_G0027100.1 mouse_genomes_project 3 35161216 35206248 - MGP_LPJ_P0060393 Bbs7 protein_coding protein_coding MGP_LPJ_T0060394.1 MGP_LPJ_G0027100.1 mouse_genomes_project 3 35162127 35163639 - Bbs7 protein_coding retained_intron MGP_LPJ_T0060395.1 MGP_LPJ_G0027100.1 mouse_genomes_project 3 35201493 35206352 - Bbs7 protein_coding retained_intron MGP_LPJ_T0060396.1 MGP_LPJ_G0027100.1 mouse_genomes_project 3 35202320 35206352 - MGP_LPJ_P0060396 Bbs7 protein_coding protein_coding MGP_LPJ_T0014101.1 MGP_LPJ_G0012192.1 mouse_genomes_project 3 82349280 82350065 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004423.1 MGP_LPJ_G0003859.1 mouse_genomes_project 3 153987233 154002402 + Gm43573 antisense antisense MGP_LPJ_T0063950.1 MGP_LPJ_G0027871.1 mouse_genomes_project 3 147341313 147386184 + MGP_LPJ_P0063950 Kyat3 protein_coding protein_coding MGP_LPJ_T0063951.1 MGP_LPJ_G0027871.1 mouse_genomes_project 3 147341342 147388527 + MGP_LPJ_P0063951 Kyat3 protein_coding protein_coding MGP_LPJ_T0063952.1 MGP_LPJ_G0027871.1 mouse_genomes_project 3 147341348 147367826 + MGP_LPJ_P0063952 Kyat3 protein_coding protein_coding MGP_LPJ_T0063953.1 MGP_LPJ_G0027871.1 mouse_genomes_project 3 147341356 147385995 + MGP_LPJ_P0063953 Kyat3 protein_coding nonsense_mediated_decay MGP_LPJ_T0063954.1 MGP_LPJ_G0027871.1 mouse_genomes_project 3 147364743 147372918 + Kyat3 protein_coding processed_transcript MGP_LPJ_T0063955.1 MGP_LPJ_G0027871.1 mouse_genomes_project 3 147370020 147371981 + Kyat3 protein_coding retained_intron MGP_LPJ_T0063956.1 MGP_LPJ_G0027871.1 mouse_genomes_project 3 147379282 147382618 + Kyat3 protein_coding retained_intron MGP_LPJ_T0063957.1 MGP_LPJ_G0027871.1 mouse_genomes_project 3 147380181 147385993 + Kyat3 protein_coding processed_transcript MGP_LPJ_T0010529.1 MGP_LPJ_G0008647.1 mouse_genomes_project 3 35053441 35053505 - Mir7009 miRNA miRNA MGP_LPJ_T0013906.1 MGP_LPJ_G0011997.1 mouse_genomes_project 3 15716983 15717900 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099406.1 MGP_LPJ_G0037669.1 mouse_genomes_project 3 84529962 84530069 + Gm24584 snRNA snRNA MGP_LPJ_T0100673.1 MGP_LPJ_G0038936.1 mouse_genomes_project 3 64244321 64244479 - Gm23897 snoRNA snoRNA MGP_LPJ_T0014092.1 MGP_LPJ_G0012183.1 mouse_genomes_project 3 78629257 78629698 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013862.1 MGP_LPJ_G0011953.1 mouse_genomes_project 3 4066568 4066914 - processed_pseudogene processed_pseudogene MGP_LPJ_T0059996.1 MGP_LPJ_G0027029.1 mouse_genomes_project 3 17053137 17150094 - MGP_LPJ_P0059996 Pde7a protein_coding protein_coding MGP_LPJ_T0059997.1 MGP_LPJ_G0027029.1 mouse_genomes_project 3 17054711 17095147 - MGP_LPJ_P0059997 Pde7a protein_coding protein_coding MGP_LPJ_T0059998.1 MGP_LPJ_G0027029.1 mouse_genomes_project 3 17057414 17060058 - Pde7a protein_coding retained_intron MGP_LPJ_T0059999.1 MGP_LPJ_G0027029.1 mouse_genomes_project 3 17057751 17063559 - Pde7a protein_coding processed_transcript MGP_LPJ_T0060000.1 MGP_LPJ_G0027029.1 mouse_genomes_project 3 17060318 17090380 - MGP_LPJ_P0060000 Pde7a protein_coding nonsense_mediated_decay MGP_LPJ_T0060001.1 MGP_LPJ_G0027029.1 mouse_genomes_project 3 17060390 17066948 - Pde7a protein_coding retained_intron MGP_LPJ_T0060002.1 MGP_LPJ_G0027029.1 mouse_genomes_project 3 17063834 17149825 - MGP_LPJ_P0060002 Pde7a protein_coding nonsense_mediated_decay MGP_LPJ_T0060003.1 MGP_LPJ_G0027029.1 mouse_genomes_project 3 17066899 17095104 - MGP_LPJ_P0060003 Pde7a protein_coding protein_coding MGP_LPJ_T0060004.1 MGP_LPJ_G0027029.1 mouse_genomes_project 3 17086832 17150077 - Pde7a protein_coding retained_intron MGP_LPJ_T0060005.1 MGP_LPJ_G0027029.1 mouse_genomes_project 3 17086930 17149676 - Pde7a protein_coding processed_transcript MGP_LPJ_T0062404.1 MGP_LPJ_G0027537.1 mouse_genomes_project 3 98319472 98321374 - MGP_LPJ_P0062404 Bola1 protein_coding protein_coding MGP_LPJ_T0062405.1 MGP_LPJ_G0027537.1 mouse_genomes_project 3 98319472 98320471 - MGP_LPJ_P0062405 Bola1 protein_coding protein_coding MGP_LPJ_T0062406.1 MGP_LPJ_G0027537.1 mouse_genomes_project 3 98319747 98335838 - MGP_LPJ_P0062406 Bola1 protein_coding protein_coding MGP_LPJ_T0001264.1 MGP_LPJ_G0001184.1 mouse_genomes_project 3 63359075 63359561 + TEC TEC MGP_LPJ_T0101336.1 MGP_LPJ_G0039544.1 mouse_genomes_project 3 132959213 132959899 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0001333.1 MGP_LPJ_G0001253.1 mouse_genomes_project 3 125140210 125141496 + TEC TEC MGP_LPJ_T0062414.1 MGP_LPJ_G0027544.1 mouse_genomes_project 3 98592318 98600727 - MGP_LPJ_P0062414 BC107364 protein_coding protein_coding MGP_LPJ_T0062415.1 MGP_LPJ_G0027544.1 mouse_genomes_project 3 98592318 98600727 - MGP_LPJ_P0062415 BC107364 protein_coding protein_coding MGP_LPJ_T0062856.1 MGP_LPJ_G0027648.1 mouse_genomes_project 3 108655571 108659669 + Tmigd3 protein_coding processed_transcript MGP_LPJ_T0062857.1 MGP_LPJ_G0027648.1 mouse_genomes_project 3 108655575 108711681 + MGP_LPJ_P0062857 Tmigd3 protein_coding protein_coding MGP_LPJ_T0062858.1 MGP_LPJ_G0027648.1 mouse_genomes_project 3 108655575 108711600 + MGP_LPJ_P0062858 Tmigd3 protein_coding nonsense_mediated_decay MGP_LPJ_T0062859.1 MGP_LPJ_G0027648.1 mouse_genomes_project 3 108655645 108656531 + Tmigd3 protein_coding processed_transcript MGP_LPJ_T0062861.1 MGP_LPJ_G0027648.1 mouse_genomes_project 3 108690507 108706476 + MGP_LPJ_P0062861 Tmigd3 protein_coding nonsense_mediated_decay MGP_LPJ_T0062863.1 MGP_LPJ_G0027648.1 mouse_genomes_project 3 108701535 108711684 + MGP_LPJ_P0062863 Tmigd3 protein_coding protein_coding MGP_LPJ_T0062864.1 MGP_LPJ_G0027648.1 mouse_genomes_project 3 108701535 108711687 + MGP_LPJ_P0062864 Tmigd3 protein_coding protein_coding MGP_LPJ_T0014176.1 MGP_LPJ_G0012267.1 mouse_genomes_project 3 104641071 104642765 + processed_pseudogene processed_pseudogene MGP_LPJ_T0060010.1 MGP_LPJ_G0027031.1 mouse_genomes_project 3 17456023 17474130 - MGP_LPJ_P0060010 1700064H15Rik protein_coding protein_coding MGP_LPJ_T0102115.1 MGP_LPJ_G0040152.1 mouse_genomes_project 3 101034973 101050033 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0061990.1 MGP_LPJ_G0027432.1 mouse_genomes_project 3 94101117 94103122 - MGP_LPJ_P0061990 Sprr1b protein_coding protein_coding MGP_LPJ_T0064116.1 MGP_LPJ_G0027907.1 mouse_genomes_project 3 151774896 151867806 + Ttll7 protein_coding retained_intron MGP_LPJ_T0064117.1 MGP_LPJ_G0027907.1 mouse_genomes_project 3 151774896 151913314 + MGP_LPJ_P0064117 Ttll7 protein_coding protein_coding MGP_LPJ_T0064118.1 MGP_LPJ_G0027907.1 mouse_genomes_project 3 151774896 151914573 + MGP_LPJ_P0064118 Ttll7 protein_coding protein_coding MGP_LPJ_T0064119.1 MGP_LPJ_G0027907.1 mouse_genomes_project 3 151821122 151910315 + MGP_LPJ_P0064119 Ttll7 protein_coding protein_coding MGP_LPJ_T0064120.1 MGP_LPJ_G0027907.1 mouse_genomes_project 3 151823602 151825453 + MGP_LPJ_P0064120 Ttll7 protein_coding protein_coding MGP_LPJ_T0064121.1 MGP_LPJ_G0027907.1 mouse_genomes_project 3 151871440 151912484 + Ttll7 protein_coding retained_intron MGP_LPJ_T0001143.1 MGP_LPJ_G0001065.1 mouse_genomes_project 3 7732685 7733182 + TEC TEC MGP_LPJ_T0014221.1 MGP_LPJ_G0012312.1 mouse_genomes_project 3 117200245 117201897 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007612.1 MGP_LPJ_G0006233.1 mouse_genomes_project 3 86331174 86364994 - Gm42813 lincRNA lincRNA MGP_LPJ_T0011549.1 MGP_LPJ_G0009667.1 mouse_genomes_project 3 33012976 33013190 + Gm27403 misc_RNA misc_RNA MGP_LPJ_T0004372.1 MGP_LPJ_G0003821.1 mouse_genomes_project 3 113321793 113325485 + C130013H08Rik antisense antisense MGP_LPJ_T0014012.1 MGP_LPJ_G0012103.1 mouse_genomes_project 3 56794800 56795429 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098583.1 MGP_LPJ_G0036857.1 mouse_genomes_project 3 107703788 107704724 - Gm43846 sense_intronic sense_intronic MGP_LPJ_T0060224.1 MGP_LPJ_G0027069.1 mouse_genomes_project 3 29374476 29402814 + MGP_LPJ_P0060224 Cldn11 protein_coding protein_coding MGP_LPJ_T0063147.1 MGP_LPJ_G0027718.1 mouse_genomes_project 3 112101518 112134447 + MGP_LPJ_P0063147 Slc25a54 protein_coding protein_coding MGP_LPJ_T0063148.1 MGP_LPJ_G0027718.1 mouse_genomes_project 3 112101548 112134342 + MGP_LPJ_P0063148 Slc25a54 protein_coding nonsense_mediated_decay MGP_LPJ_T0062472.1 MGP_LPJ_G0027560.1 mouse_genomes_project 3 98980503 99012462 - MGP_LPJ_P0062472 Cd160 protein_coding protein_coding MGP_LPJ_T0062473.1 MGP_LPJ_G0027560.1 mouse_genomes_project 3 98980503 99012462 - MGP_LPJ_P0062473 Cd160 protein_coding protein_coding MGP_LPJ_T0062474.1 MGP_LPJ_G0027560.1 mouse_genomes_project 3 98981895 98997076 - MGP_LPJ_P0062474 Cd160 protein_coding protein_coding MGP_LPJ_T0062475.1 MGP_LPJ_G0027560.1 mouse_genomes_project 3 98982343 98991422 - MGP_LPJ_P0062475 Cd160 protein_coding unknown_likely_coding MGP_LPJ_T0007728.1 MGP_LPJ_G0006321.1 mouse_genomes_project 3 138112021 138116600 - lincRNA lincRNA MGP_LPJ_T0060297.1 MGP_LPJ_G0027084.1 mouse_genomes_project 3 32211389 32232886 + MGP_LPJ_P0060297 Ttc14 protein_coding protein_coding MGP_LPJ_T0060298.1 MGP_LPJ_G0027084.1 mouse_genomes_project 3 32211732 32212428 + Ttc14 protein_coding retained_intron MGP_LPJ_T0060299.1 MGP_LPJ_G0027084.1 mouse_genomes_project 3 32211748 32225356 + MGP_LPJ_P0060299 Ttc14 protein_coding protein_coding MGP_LPJ_T0060300.1 MGP_LPJ_G0027084.1 mouse_genomes_project 3 32211767 32225211 + MGP_LPJ_P0060300 Ttc14 protein_coding protein_coding MGP_LPJ_T0060301.1 MGP_LPJ_G0027084.1 mouse_genomes_project 3 32211770 32230317 + MGP_LPJ_P0060301 Ttc14 protein_coding protein_coding MGP_LPJ_T0060302.1 MGP_LPJ_G0027084.1 mouse_genomes_project 3 32211770 32227704 + MGP_LPJ_P0060302 Ttc14 protein_coding nonsense_mediated_decay MGP_LPJ_T0060303.1 MGP_LPJ_G0027084.1 mouse_genomes_project 3 32211808 32227970 + MGP_LPJ_P0060303 Ttc14 protein_coding protein_coding MGP_LPJ_T0060304.1 MGP_LPJ_G0027084.1 mouse_genomes_project 3 32211820 32224809 + MGP_LPJ_P0060304 Ttc14 protein_coding protein_coding MGP_LPJ_T0060305.1 MGP_LPJ_G0027084.1 mouse_genomes_project 3 32218559 32225343 + MGP_LPJ_P0060305 Ttc14 protein_coding nonsense_mediated_decay MGP_LPJ_T0060306.1 MGP_LPJ_G0027084.1 mouse_genomes_project 3 32219889 32220465 + Ttc14 protein_coding retained_intron MGP_LPJ_T0001282.1 MGP_LPJ_G0001202.1 mouse_genomes_project 3 79041926 79043566 - TEC TEC MGP_LPJ_T0062483.1 MGP_LPJ_G0027562.1 mouse_genomes_project 3 99045026 99082678 - MGP_LPJ_P0062483 Gpr89 protein_coding protein_coding MGP_LPJ_T0062484.1 MGP_LPJ_G0027562.1 mouse_genomes_project 3 99045336 99070257 - Gpr89 protein_coding processed_transcript MGP_LPJ_T0062485.1 MGP_LPJ_G0027562.1 mouse_genomes_project 3 99048231 99053565 - Gpr89 protein_coding retained_intron MGP_LPJ_T0062486.1 MGP_LPJ_G0027562.1 mouse_genomes_project 3 99057948 99075881 - Gpr89 protein_coding processed_transcript MGP_LPJ_T0062487.1 MGP_LPJ_G0027562.1 mouse_genomes_project 3 99059852 99074770 - Gpr89 protein_coding processed_transcript MGP_LPJ_T0062488.1 MGP_LPJ_G0027562.1 mouse_genomes_project 3 99059852 99082644 - MGP_LPJ_P0062488 Gpr89 protein_coding nonsense_mediated_decay MGP_LPJ_T0062502.1 MGP_LPJ_G0027566.1 mouse_genomes_project 3 99397547 99421845 - MGP_LPJ_P0062502 Bcl9 protein_coding protein_coding MGP_LPJ_T0062503.1 MGP_LPJ_G0027566.1 mouse_genomes_project 3 99398513 99410978 - MGP_LPJ_P0062503 Bcl9 protein_coding protein_coding MGP_LPJ_T0062504.1 MGP_LPJ_G0027566.1 mouse_genomes_project 3 99404349 99407896 - Bcl9 protein_coding processed_transcript MGP_LPJ_T0062505.1 MGP_LPJ_G0027566.1 mouse_genomes_project 3 99408370 99424341 - Bcl9 protein_coding retained_intron MGP_LPJ_T0062506.1 MGP_LPJ_G0027566.1 mouse_genomes_project 3 99410998 99424857 - Bcl9 protein_coding processed_transcript MGP_LPJ_T0062507.1 MGP_LPJ_G0027566.1 mouse_genomes_project 3 99411023 99490664 - Bcl9 protein_coding processed_transcript MGP_LPJ_T0062508.1 MGP_LPJ_G0027566.1 mouse_genomes_project 3 99416305 99418690 - Bcl9 protein_coding retained_intron MGP_LPJ_T0098543.1 MGP_LPJ_G0036817.1 mouse_genomes_project 3 100551511 100554570 + Gm43189 sense_intronic sense_intronic MGP_LPJ_T0098596.1 MGP_LPJ_G0036870.1 mouse_genomes_project 3 158733200 158745431 - 1700015C17Rik sense_intronic sense_intronic MGP_LPJ_T0001359.1 MGP_LPJ_G0001279.1 mouse_genomes_project 3 131007271 131009759 - TEC TEC MGP_LPJ_T0062624.1 MGP_LPJ_G0027602.1 mouse_genomes_project 3 104114660 104143096 - MGP_LPJ_P0062624 Atp1a1 protein_coding protein_coding MGP_LPJ_T0062625.1 MGP_LPJ_G0027602.1 mouse_genomes_project 3 104114757 104116002 - Atp1a1 protein_coding retained_intron MGP_LPJ_T0062626.1 MGP_LPJ_G0027602.1 mouse_genomes_project 3 104124229 104127449 - Atp1a1 protein_coding retained_intron MGP_LPJ_T0007721.1 MGP_LPJ_G0006314.1 mouse_genomes_project 3 135165386 135166741 - Gm43349 lincRNA lincRNA MGP_LPJ_T0060137.1 MGP_LPJ_G0027054.1 mouse_genomes_project 3 26867785 26885347 + MGP_LPJ_P0060137 Eif5a2 protein_coding protein_coding MGP_LPJ_T0063157.1 MGP_LPJ_G0027721.1 mouse_genomes_project 3 112841617 113215777 - MGP_LPJ_P0063157 Ntng1 protein_coding protein_coding MGP_LPJ_T0063158.1 MGP_LPJ_G0027721.1 mouse_genomes_project 3 112841623 113216784 - MGP_LPJ_P0063158 Ntng1 protein_coding protein_coding MGP_LPJ_T0063159.1 MGP_LPJ_G0027721.1 mouse_genomes_project 3 112842692 113216248 - MGP_LPJ_P0063159 Ntng1 protein_coding nonsense_mediated_decay MGP_LPJ_T0063160.1 MGP_LPJ_G0027721.1 mouse_genomes_project 3 112844259 113208310 - MGP_LPJ_P0063160 Ntng1 protein_coding protein_coding MGP_LPJ_T0063161.1 MGP_LPJ_G0027721.1 mouse_genomes_project 3 112844259 113208310 - MGP_LPJ_P0063161 Ntng1 protein_coding protein_coding MGP_LPJ_T0063162.1 MGP_LPJ_G0027721.1 mouse_genomes_project 3 112844259 113208310 - MGP_LPJ_P0063162 Ntng1 protein_coding protein_coding MGP_LPJ_T0063163.1 MGP_LPJ_G0027721.1 mouse_genomes_project 3 112844259 113208310 - MGP_LPJ_P0063163 Ntng1 protein_coding protein_coding MGP_LPJ_T0063164.1 MGP_LPJ_G0027721.1 mouse_genomes_project 3 112844259 113208310 - MGP_LPJ_P0063164 Ntng1 protein_coding protein_coding MGP_LPJ_T0063165.1 MGP_LPJ_G0027721.1 mouse_genomes_project 3 112844259 113216494 - MGP_LPJ_P0063165 Ntng1 protein_coding unknown_likely_coding MGP_LPJ_T0063166.1 MGP_LPJ_G0027721.1 mouse_genomes_project 3 112844259 113208310 - MGP_LPJ_P0063166 Ntng1 protein_coding protein_coding MGP_LPJ_T0063167.1 MGP_LPJ_G0027721.1 mouse_genomes_project 3 112894886 112897186 - Ntng1 protein_coding retained_intron MGP_LPJ_T0063168.1 MGP_LPJ_G0027721.1 mouse_genomes_project 3 112894886 113208270 - Ntng1 protein_coding retained_intron MGP_LPJ_T0063169.1 MGP_LPJ_G0027721.1 mouse_genomes_project 3 113216457 113216784 - MGP_LPJ_P0063169 Ntng1 protein_coding protein_coding MGP_LPJ_T0017894.1 MGP_LPJ_G0015416.1 mouse_genomes_project 3 35942281 36042873 + Gm43439 processed_transcript processed_transcript MGP_LPJ_T0014222.1 MGP_LPJ_G0012313.1 mouse_genomes_project 3 117916576 117916928 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007591.1 MGP_LPJ_G0006216.1 mouse_genomes_project 3 76133085 76141755 - Platr10 lincRNA lincRNA MGP_LPJ_T0007592.1 MGP_LPJ_G0006216.1 mouse_genomes_project 3 76133479 76134289 - Platr10 lincRNA lincRNA MGP_LPJ_T0013956.1 MGP_LPJ_G0012047.1 mouse_genomes_project 3 35693538 35694235 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062603.1 MGP_LPJ_G0027595.1 mouse_genomes_project 3 103318938 103396904 + MGP_LPJ_P0062603 Vtcn1 protein_coding protein_coding MGP_LPJ_T0014173.1 MGP_LPJ_G0012264.1 mouse_genomes_project 3 103779916 103780476 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001306.1 MGP_LPJ_G0001226.1 mouse_genomes_project 3 99819286 99823183 + TEC TEC MGP_LPJ_T0064074.1 MGP_LPJ_G0027898.1 mouse_genomes_project 3 151338919 151342056 + Ctbs protein_coding retained_intron MGP_LPJ_T0064075.1 MGP_LPJ_G0027898.1 mouse_genomes_project 3 151339594 151354734 + MGP_LPJ_P0064075 Ctbs protein_coding protein_coding MGP_LPJ_T0064076.1 MGP_LPJ_G0027898.1 mouse_genomes_project 3 151339602 151346465 + MGP_LPJ_P0064076 Ctbs protein_coding nonsense_mediated_decay MGP_LPJ_T0064077.1 MGP_LPJ_G0027898.1 mouse_genomes_project 3 151339617 151354656 + MGP_LPJ_P0064077 Ctbs protein_coding protein_coding MGP_LPJ_T0014286.1 MGP_LPJ_G0012377.1 mouse_genomes_project 3 139824300 139824558 + processed_pseudogene processed_pseudogene MGP_LPJ_T0063646.1 MGP_LPJ_G0027809.1 mouse_genomes_project 3 134955863 134956436 - Rpl34 protein_coding retained_intron MGP_LPJ_T0063647.1 MGP_LPJ_G0027809.1 mouse_genomes_project 3 134955893 134959385 - Rpl34 protein_coding retained_intron MGP_LPJ_T0063648.1 MGP_LPJ_G0027809.1 mouse_genomes_project 3 134955904 134959001 - MGP_LPJ_P0063648 Rpl34 protein_coding protein_coding MGP_LPJ_T0063649.1 MGP_LPJ_G0027809.1 mouse_genomes_project 3 134957588 134959390 - Rpl34 protein_coding retained_intron MGP_LPJ_T0102110.1 MGP_LPJ_G0040147.1 mouse_genomes_project 3 96156115 96156301 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0099447.1 MGP_LPJ_G0037710.1 mouse_genomes_project 3 141475704 141475811 + Gm26107 snRNA snRNA MGP_LPJ_T0014289.1 MGP_LPJ_G0012380.1 mouse_genomes_project 3 139824321 139824552 + processed_pseudogene processed_pseudogene MGP_LPJ_T0063086.1 MGP_LPJ_G0027706.1 mouse_genomes_project 3 111533444 111540409 - MGP_LPJ_P0063086 protein_coding protein_coding MGP_LPJ_T0063087.1 MGP_LPJ_G0027706.1 mouse_genomes_project 3 111533444 111540113 - MGP_LPJ_P0063087 protein_coding protein_coding MGP_LPJ_T0004417.1 MGP_LPJ_G0003854.1 mouse_genomes_project 3 147385318 147386338 - Gm15540 antisense antisense MGP_LPJ_T0001431.1 MGP_LPJ_G0001350.1 mouse_genomes_project 3 163781556 163785895 + TEC TEC MGP_LPJ_T0001372.1 MGP_LPJ_G0001291.1 mouse_genomes_project 3 133362038 133364618 - TEC TEC MGP_LPJ_T0059870.1 MGP_LPJ_G0026986.1 mouse_genomes_project 3 4687187 4762232 + MGP_LPJ_P0059870 Pkia protein_coding protein_coding MGP_LPJ_T0059871.1 MGP_LPJ_G0026986.1 mouse_genomes_project 3 4687188 4772512 + MGP_LPJ_P0059871 Pkia protein_coding protein_coding MGP_LPJ_T0059872.1 MGP_LPJ_G0026986.1 mouse_genomes_project 3 4753156 4769559 + MGP_LPJ_P0059872 Pkia protein_coding protein_coding MGP_LPJ_T0063616.1 MGP_LPJ_G0027804.1 mouse_genomes_project 3 134113448 134169984 - MGP_LPJ_P0063616 Ccdc109b protein_coding protein_coding MGP_LPJ_T0063617.1 MGP_LPJ_G0027804.1 mouse_genomes_project 3 134113463 134169826 - MGP_LPJ_P0063617 Ccdc109b protein_coding protein_coding MGP_LPJ_T0063618.1 MGP_LPJ_G0027804.1 mouse_genomes_project 3 134115571 134169767 - MGP_LPJ_P0063618 Ccdc109b protein_coding protein_coding MGP_LPJ_T0063619.1 MGP_LPJ_G0027804.1 mouse_genomes_project 3 134126138 134169902 - MGP_LPJ_P0063619 Ccdc109b protein_coding nonsense_mediated_decay MGP_LPJ_T0001288.1 MGP_LPJ_G0001208.1 mouse_genomes_project 3 86845513 86847054 + TEC TEC MGP_LPJ_T0061065.1 MGP_LPJ_G0027239.1 mouse_genomes_project 3 75528076 75637520 - MGP_LPJ_P0061065 Zbbx protein_coding protein_coding MGP_LPJ_T0061066.1 MGP_LPJ_G0027239.1 mouse_genomes_project 3 75528134 75649257 - MGP_LPJ_P0061066 Zbbx protein_coding protein_coding MGP_LPJ_T0061067.1 MGP_LPJ_G0027239.1 mouse_genomes_project 3 75550477 75637451 - MGP_LPJ_P0061067 Zbbx protein_coding protein_coding MGP_LPJ_T0061068.1 MGP_LPJ_G0027239.1 mouse_genomes_project 3 75567922 75637520 - MGP_LPJ_P0061068 Zbbx protein_coding protein_coding MGP_LPJ_T0061069.1 MGP_LPJ_G0027239.1 mouse_genomes_project 3 75594190 75661464 - MGP_LPJ_P0061069 Zbbx protein_coding protein_coding MGP_LPJ_T0098590.1 MGP_LPJ_G0036864.1 mouse_genomes_project 3 123396378 123399617 - Gm42664 sense_intronic sense_intronic MGP_LPJ_T0013963.1 MGP_LPJ_G0012054.1 mouse_genomes_project 3 37142530 37143362 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060839.1 MGP_LPJ_G0027184.1 mouse_genomes_project 3 58852609 58863924 - MGP_LPJ_P0060839 P2ry12 protein_coding protein_coding MGP_LPJ_T0060840.1 MGP_LPJ_G0027184.1 mouse_genomes_project 3 58852696 58898539 - MGP_LPJ_P0060840 P2ry12 protein_coding protein_coding MGP_LPJ_T0060841.1 MGP_LPJ_G0027184.1 mouse_genomes_project 3 58852697 58856597 - MGP_LPJ_P0060841 P2ry12 protein_coding protein_coding MGP_LPJ_T0060842.1 MGP_LPJ_G0027184.1 mouse_genomes_project 3 58852698 58898579 - MGP_LPJ_P0060842 P2ry12 protein_coding protein_coding MGP_LPJ_T0060843.1 MGP_LPJ_G0027184.1 mouse_genomes_project 3 58854242 58856538 - MGP_LPJ_P0060843 P2ry12 protein_coding protein_coding MGP_LPJ_T0099392.1 MGP_LPJ_G0037655.1 mouse_genomes_project 3 57477833 57477933 - Gm24531 snRNA snRNA MGP_LPJ_T0060802.1 MGP_LPJ_G0027173.1 mouse_genomes_project 3 58104516 58110592 - MGP_LPJ_P0060802 Serp1 protein_coding protein_coding MGP_LPJ_T0063815.1 MGP_LPJ_G0027840.1 mouse_genomes_project 3 141976533 141979111 - protein_coding lincRNA MGP_LPJ_T0014178.1 MGP_LPJ_G0012269.1 mouse_genomes_project 3 105260167 105260845 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001397.1 MGP_LPJ_G0001316.1 mouse_genomes_project 3 143455337 143457113 - TEC TEC MGP_LPJ_T0062046.1 MGP_LPJ_G0027474.1 mouse_genomes_project 3 96219485 96224735 + MGP_LPJ_P0062046 Them5 protein_coding protein_coding MGP_LPJ_T0062047.1 MGP_LPJ_G0027474.1 mouse_genomes_project 3 96219645 96224733 + MGP_LPJ_P0062047 Them5 protein_coding protein_coding MGP_LPJ_T0099442.1 MGP_LPJ_G0037705.1 mouse_genomes_project 3 128296161 128296271 + Gm22575 snRNA snRNA MGP_LPJ_T0100657.1 MGP_LPJ_G0038920.1 mouse_genomes_project 3 25091242 25091356 + Gm25152 snoRNA snoRNA MGP_LPJ_T0014187.1 MGP_LPJ_G0012278.1 mouse_genomes_project 3 107074986 107079747 - processed_pseudogene processed_pseudogene MGP_LPJ_T0063529.1 MGP_LPJ_G0027787.1 mouse_genomes_project 3 131577290 131595434 - MGP_LPJ_P0063529 Larp7 protein_coding protein_coding MGP_LPJ_T0063530.1 MGP_LPJ_G0027787.1 mouse_genomes_project 3 131584957 131588341 - Larp7 protein_coding retained_intron MGP_LPJ_T0063531.1 MGP_LPJ_G0027787.1 mouse_genomes_project 3 131587270 131595282 - Larp7 protein_coding retained_intron MGP_LPJ_T0063532.1 MGP_LPJ_G0027787.1 mouse_genomes_project 3 131587933 131595432 - MGP_LPJ_P0063532 Larp7 protein_coding protein_coding MGP_LPJ_T0098560.1 MGP_LPJ_G0036834.1 mouse_genomes_project 3 105937823 105939973 + Gm43061 sense_intronic sense_intronic MGP_LPJ_T0014234.1 MGP_LPJ_G0012325.1 mouse_genomes_project 3 121445864 121446306 - processed_pseudogene processed_pseudogene MGP_LPJ_T0061193.1 MGP_LPJ_G0027270.1 mouse_genomes_project 3 83866326 83883588 + MGP_LPJ_P0061193 Plrg1 protein_coding protein_coding MGP_LPJ_T0061194.1 MGP_LPJ_G0027270.1 mouse_genomes_project 3 83866336 83883522 + MGP_LPJ_P0061194 Plrg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0061195.1 MGP_LPJ_G0027270.1 mouse_genomes_project 3 83866359 83883405 + MGP_LPJ_P0061195 Plrg1 protein_coding protein_coding MGP_LPJ_T0061196.1 MGP_LPJ_G0027270.1 mouse_genomes_project 3 83879305 83880328 + Plrg1 protein_coding retained_intron MGP_LPJ_T0061197.1 MGP_LPJ_G0027270.1 mouse_genomes_project 3 83880235 83881426 + Plrg1 protein_coding retained_intron MGP_LPJ_T0001145.1 MGP_LPJ_G0001067.1 mouse_genomes_project 3 8170186 8171973 + TEC TEC MGP_LPJ_T0014226.1 MGP_LPJ_G0012317.1 mouse_genomes_project 3 119351355 119352492 + processed_pseudogene processed_pseudogene MGP_LPJ_T0061059.1 MGP_LPJ_G0027237.1 mouse_genomes_project 3 73408711 73423797 - MGP_LPJ_P0061059 Slitrk3 protein_coding protein_coding MGP_LPJ_T0061060.1 MGP_LPJ_G0027237.1 mouse_genomes_project 3 73409576 73424658 - MGP_LPJ_P0061060 Slitrk3 protein_coding protein_coding MGP_LPJ_T0014209.1 MGP_LPJ_G0012300.1 mouse_genomes_project 3 114211012 114211329 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102106.1 MGP_LPJ_G0040143.1 mouse_genomes_project 3 94780502 94780727 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0063296.1 MGP_LPJ_G0027751.1 mouse_genomes_project 3 121332152 121425186 - MGP_LPJ_P0063296 Snx7 protein_coding protein_coding MGP_LPJ_T0063297.1 MGP_LPJ_G0027751.1 mouse_genomes_project 3 121332457 121399487 - MGP_LPJ_P0063297 Snx7 protein_coding protein_coding MGP_LPJ_T0063298.1 MGP_LPJ_G0027751.1 mouse_genomes_project 3 121332583 121425102 - MGP_LPJ_P0063298 Snx7 protein_coding protein_coding MGP_LPJ_T0063299.1 MGP_LPJ_G0027751.1 mouse_genomes_project 3 121379308 121383507 - Snx7 protein_coding retained_intron MGP_LPJ_T0007586.1 MGP_LPJ_G0006212.1 mouse_genomes_project 3 73433025 73573621 + lincRNA lincRNA MGP_LPJ_T0007587.1 MGP_LPJ_G0006212.1 mouse_genomes_project 3 73433060 73995194 + lincRNA lincRNA MGP_LPJ_T0004282.1 MGP_LPJ_G0003767.1 mouse_genomes_project 3 81815776 81818809 - Gm16000 antisense antisense MGP_LPJ_T0102084.1 MGP_LPJ_G0040121.1 mouse_genomes_project 3 59138469 59166965 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0099413.1 MGP_LPJ_G0037676.1 mouse_genomes_project 3 87944802 87944962 + Gm23376 snRNA snRNA MGP_LPJ_T0063384.1 MGP_LPJ_G0027765.1 mouse_genomes_project 3 126042199 126053072 + MGP_LPJ_P0063384 Dnttip2 protein_coding protein_coding MGP_LPJ_T0063385.1 MGP_LPJ_G0027765.1 mouse_genomes_project 3 126042229 126044024 + Dnttip2 protein_coding processed_transcript MGP_LPJ_T0063386.1 MGP_LPJ_G0027765.1 mouse_genomes_project 3 126043830 126053050 + Dnttip2 protein_coding processed_transcript MGP_LPJ_T0063387.1 MGP_LPJ_G0027765.1 mouse_genomes_project 3 126044583 126047417 + Dnttip2 protein_coding retained_intron MGP_LPJ_T0063388.1 MGP_LPJ_G0027765.1 mouse_genomes_project 3 126048382 126052899 + Dnttip2 protein_coding retained_intron MGP_LPJ_T0007712.1 MGP_LPJ_G0006307.1 mouse_genomes_project 3 132811401 132813419 - 4933424H11Rik lincRNA lincRNA MGP_LPJ_T0004277.1 MGP_LPJ_G0003762.1 mouse_genomes_project 3 65875620 65918679 - Gm37359 antisense antisense MGP_LPJ_T0007601.1 MGP_LPJ_G0006223.1 mouse_genomes_project 3 81724831 81735187 + Gm42468 lincRNA lincRNA MGP_LPJ_T0004283.1 MGP_LPJ_G0003768.1 mouse_genomes_project 3 83687038 83752871 + Rbm46os antisense antisense MGP_LPJ_T0004284.1 MGP_LPJ_G0003768.1 mouse_genomes_project 3 83687038 83750953 + Rbm46os antisense antisense MGP_LPJ_T0004285.1 MGP_LPJ_G0003768.1 mouse_genomes_project 3 83687079 83750988 + Rbm46os antisense antisense MGP_LPJ_T0004286.1 MGP_LPJ_G0003768.1 mouse_genomes_project 3 83714673 83753516 + Rbm46os antisense antisense MGP_LPJ_T0001403.1 MGP_LPJ_G0001322.1 mouse_genomes_project 3 153559310 153559850 + TEC TEC MGP_LPJ_T0004280.1 MGP_LPJ_G0003765.1 mouse_genomes_project 3 80541010 80568507 - Gm36569 antisense antisense MGP_LPJ_T0102083.1 MGP_LPJ_G0040120.1 mouse_genomes_project 3 59117795 59118060 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0061998.1 MGP_LPJ_G0027439.1 mouse_genomes_project 3 94269693 94272649 - MGP_LPJ_P0061998 2210017I01Rik protein_coding protein_coding MGP_LPJ_T0099418.1 MGP_LPJ_G0037681.1 mouse_genomes_project 3 91294574 91294739 - Gm24046 snRNA snRNA MGP_LPJ_T0062230.1 MGP_LPJ_G0027506.1 mouse_genomes_project 3 97249981 97254707 - MGP_LPJ_P0062230 Gm128 protein_coding protein_coding MGP_LPJ_T0062231.1 MGP_LPJ_G0027506.1 mouse_genomes_project 3 97250168 97254707 - MGP_LPJ_P0062231 Gm128 protein_coding protein_coding MGP_LPJ_T0060960.1 MGP_LPJ_G0027212.1 mouse_genomes_project 3 66287872 66293768 + MGP_LPJ_P0060960 Ptx3 protein_coding protein_coding MGP_LPJ_T0060961.1 MGP_LPJ_G0027212.1 mouse_genomes_project 3 66288207 66289393 + Ptx3 protein_coding retained_intron MGP_LPJ_T0014337.1 MGP_LPJ_G0012428.1 mouse_genomes_project 3 161448666 161449737 + processed_pseudogene processed_pseudogene MGP_LPJ_T0064027.1 MGP_LPJ_G0027886.1 mouse_genomes_project 3 150095211 150368206 + MGP_LPJ_P0064027 Col24a1 protein_coding protein_coding MGP_LPJ_T0064028.1 MGP_LPJ_G0027886.1 mouse_genomes_project 3 150095266 150117806 + MGP_LPJ_P0064028 Col24a1 protein_coding protein_coding MGP_LPJ_T0064029.1 MGP_LPJ_G0027886.1 mouse_genomes_project 3 150095847 150366901 + MGP_LPJ_P0064029 Col24a1 protein_coding unknown_likely_coding MGP_LPJ_T0064030.1 MGP_LPJ_G0027886.1 mouse_genomes_project 3 150331766 150354920 + Col24a1 protein_coding processed_transcript MGP_LPJ_T0064031.1 MGP_LPJ_G0027886.1 mouse_genomes_project 3 150361234 150368201 + Col24a1 protein_coding retained_intron MGP_LPJ_T0062960.1 MGP_LPJ_G0027676.1 mouse_genomes_project 3 110477521 110478908 - MGP_LPJ_P0062960 Ubl4b protein_coding protein_coding MGP_LPJ_T0007769.1 MGP_LPJ_G0006357.1 mouse_genomes_project 3 150472938 150475106 + Gm17501 lincRNA lincRNA MGP_LPJ_T0007770.1 MGP_LPJ_G0006357.1 mouse_genomes_project 3 150474726 150513482 + Gm17501 lincRNA lincRNA MGP_LPJ_T0061977.1 MGP_LPJ_G0027420.1 mouse_genomes_project 3 93675521 93692253 + MGP_LPJ_P0061977 Pglyrp3 protein_coding protein_coding MGP_LPJ_T0011565.1 MGP_LPJ_G0009683.1 mouse_genomes_project 3 128751857 128752155 + Gm23673 misc_RNA misc_RNA MGP_LPJ_T0063458.1 MGP_LPJ_G0027781.1 mouse_genomes_project 3 128440417 128465159 - MGP_LPJ_P0063458 1700003H04Rik protein_coding protein_coding MGP_LPJ_T0063459.1 MGP_LPJ_G0027781.1 mouse_genomes_project 3 128440417 128465159 - MGP_LPJ_P0063459 1700003H04Rik protein_coding protein_coding MGP_LPJ_T0063460.1 MGP_LPJ_G0027781.1 mouse_genomes_project 3 128449976 128465160 - MGP_LPJ_P0063460 1700003H04Rik protein_coding protein_coding MGP_LPJ_T0063461.1 MGP_LPJ_G0027781.1 mouse_genomes_project 3 128457287 128465169 - MGP_LPJ_P0063461 1700003H04Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0063462.1 MGP_LPJ_G0027781.1 mouse_genomes_project 3 128457288 128462559 - MGP_LPJ_P0063462 1700003H04Rik protein_coding protein_coding MGP_LPJ_T0063463.1 MGP_LPJ_G0027781.1 mouse_genomes_project 3 128457288 128465162 - MGP_LPJ_P0063463 1700003H04Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0007775.1 MGP_LPJ_G0006362.1 mouse_genomes_project 3 152352271 152356648 + Gm37041 lincRNA lincRNA MGP_LPJ_T0014145.1 MGP_LPJ_G0012236.1 mouse_genomes_project 3 97385585 97385779 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014312.1 MGP_LPJ_G0012403.1 mouse_genomes_project 3 145427981 145428513 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060435.1 MGP_LPJ_G0027106.1 mouse_genomes_project 3 35938273 35942209 - MGP_LPJ_P0060435 Cetn4 protein_coding protein_coding MGP_LPJ_T0060436.1 MGP_LPJ_G0027106.1 mouse_genomes_project 3 35938998 35942471 - MGP_LPJ_P0060436 Cetn4 protein_coding protein_coding MGP_LPJ_T0063065.1 MGP_LPJ_G0027702.1 mouse_genomes_project 3 111358547 111384348 - MGP_LPJ_P0063065 Celsr2 protein_coding protein_coding MGP_LPJ_T0063066.1 MGP_LPJ_G0027702.1 mouse_genomes_project 3 111359918 111366648 - MGP_LPJ_P0063066 Celsr2 protein_coding protein_coding MGP_LPJ_T0063067.1 MGP_LPJ_G0027702.1 mouse_genomes_project 3 111360075 111361130 - Celsr2 protein_coding processed_transcript MGP_LPJ_T0063068.1 MGP_LPJ_G0027702.1 mouse_genomes_project 3 111360296 111361221 - Celsr2 protein_coding retained_intron MGP_LPJ_T0063069.1 MGP_LPJ_G0027702.1 mouse_genomes_project 3 111361231 111361999 - Celsr2 protein_coding retained_intron MGP_LPJ_T0063070.1 MGP_LPJ_G0027702.1 mouse_genomes_project 3 111363256 111364190 - Celsr2 protein_coding retained_intron MGP_LPJ_T0063071.1 MGP_LPJ_G0027702.1 mouse_genomes_project 3 111368956 111370286 - Celsr2 protein_coding retained_intron MGP_LPJ_T0099412.1 MGP_LPJ_G0037675.1 mouse_genomes_project 3 87366048 87366155 + Gm25039 snRNA snRNA MGP_LPJ_T0060815.1 MGP_LPJ_G0027177.1 mouse_genomes_project 3 58291722 58309155 - MGP_LPJ_P0060815 Siah2 protein_coding protein_coding MGP_LPJ_T0060816.1 MGP_LPJ_G0027177.1 mouse_genomes_project 3 58292960 58302836 - Siah2 protein_coding processed_transcript MGP_LPJ_T0001283.1 MGP_LPJ_G0001203.1 mouse_genomes_project 3 80287060 80288349 - TEC TEC MGP_LPJ_T0060264.1 MGP_LPJ_G0027079.1 mouse_genomes_project 3 31096871 31108753 + MGP_LPJ_P0060264 Actl6a protein_coding protein_coding MGP_LPJ_T0060265.1 MGP_LPJ_G0027079.1 mouse_genomes_project 3 31099095 31117126 + MGP_LPJ_P0060265 Actl6a protein_coding protein_coding MGP_LPJ_T0060266.1 MGP_LPJ_G0027079.1 mouse_genomes_project 3 31099138 31100595 + Actl6a protein_coding retained_intron MGP_LPJ_T0060267.1 MGP_LPJ_G0027079.1 mouse_genomes_project 3 31099353 31108747 + MGP_LPJ_P0060267 Actl6a protein_coding nonsense_mediated_decay MGP_LPJ_T0060268.1 MGP_LPJ_G0027079.1 mouse_genomes_project 3 31099752 31108796 + MGP_LPJ_P0060268 Actl6a protein_coding protein_coding MGP_LPJ_T0060269.1 MGP_LPJ_G0027079.1 mouse_genomes_project 3 31101982 31102770 + Actl6a protein_coding retained_intron MGP_LPJ_T0060270.1 MGP_LPJ_G0027079.1 mouse_genomes_project 3 31102771 31116926 + MGP_LPJ_P0060270 Actl6a protein_coding nonsense_mediated_decay MGP_LPJ_T0060271.1 MGP_LPJ_G0027079.1 mouse_genomes_project 3 31108706 31117121 + Actl6a protein_coding retained_intron MGP_LPJ_T0062930.1 MGP_LPJ_G0027664.1 mouse_genomes_project 3 109691349 109692376 - MGP_LPJ_P0062930 Olfr266 protein_coding protein_coding MGP_LPJ_T0061815.1 MGP_LPJ_G0027387.1 mouse_genomes_project 3 91333614 91385867 - MGP_LPJ_P0061815 Ubap2l protein_coding protein_coding MGP_LPJ_T0061816.1 MGP_LPJ_G0027387.1 mouse_genomes_project 3 91333614 91385877 - MGP_LPJ_P0061816 Ubap2l protein_coding protein_coding MGP_LPJ_T0061817.1 MGP_LPJ_G0027387.1 mouse_genomes_project 3 91333762 91385887 - MGP_LPJ_P0061817 Ubap2l protein_coding protein_coding MGP_LPJ_T0061818.1 MGP_LPJ_G0027387.1 mouse_genomes_project 3 91333767 91385874 - MGP_LPJ_P0061818 Ubap2l protein_coding protein_coding MGP_LPJ_T0061819.1 MGP_LPJ_G0027387.1 mouse_genomes_project 3 91334287 91336764 - MGP_LPJ_P0061819 Ubap2l protein_coding protein_coding MGP_LPJ_T0061820.1 MGP_LPJ_G0027387.1 mouse_genomes_project 3 91335873 91337261 - Ubap2l protein_coding retained_intron MGP_LPJ_T0061821.1 MGP_LPJ_G0027387.1 mouse_genomes_project 3 91339468 91385864 - MGP_LPJ_P0061821 Ubap2l protein_coding protein_coding MGP_LPJ_T0061822.1 MGP_LPJ_G0027387.1 mouse_genomes_project 3 91339693 91354761 - MGP_LPJ_P0061822 Ubap2l protein_coding protein_coding MGP_LPJ_T0061823.1 MGP_LPJ_G0027387.1 mouse_genomes_project 3 91339694 91385927 - MGP_LPJ_P0061823 Ubap2l protein_coding protein_coding MGP_LPJ_T0061824.1 MGP_LPJ_G0027387.1 mouse_genomes_project 3 91339694 91385884 - MGP_LPJ_P0061824 Ubap2l protein_coding protein_coding MGP_LPJ_T0061825.1 MGP_LPJ_G0027387.1 mouse_genomes_project 3 91347665 91349761 - Ubap2l protein_coding retained_intron MGP_LPJ_T0061826.1 MGP_LPJ_G0027387.1 mouse_genomes_project 3 91347838 91354058 - Ubap2l protein_coding retained_intron MGP_LPJ_T0061827.1 MGP_LPJ_G0027387.1 mouse_genomes_project 3 91348485 91385743 - Ubap2l protein_coding retained_intron MGP_LPJ_T0061828.1 MGP_LPJ_G0027387.1 mouse_genomes_project 3 91349607 91351097 - Ubap2l protein_coding retained_intron MGP_LPJ_T0061829.1 MGP_LPJ_G0027387.1 mouse_genomes_project 3 91350019 91351965 - Ubap2l protein_coding retained_intron MGP_LPJ_T0061830.1 MGP_LPJ_G0027387.1 mouse_genomes_project 3 91353714 91360905 - Ubap2l protein_coding retained_intron MGP_LPJ_T0061831.1 MGP_LPJ_G0027387.1 mouse_genomes_project 3 91355500 91356897 - Ubap2l protein_coding retained_intron MGP_LPJ_T0061832.1 MGP_LPJ_G0027387.1 mouse_genomes_project 3 91369927 91372323 - Ubap2l protein_coding retained_intron MGP_LPJ_T0061833.1 MGP_LPJ_G0027387.1 mouse_genomes_project 3 91372446 91385494 - MGP_LPJ_P0061833 Ubap2l protein_coding protein_coding MGP_LPJ_T0061834.1 MGP_LPJ_G0027387.1 mouse_genomes_project 3 91375214 91385914 - Ubap2l protein_coding retained_intron MGP_LPJ_T0061835.1 MGP_LPJ_G0027387.1 mouse_genomes_project 3 91377154 91386040 - MGP_LPJ_P0061835 Ubap2l protein_coding protein_coding MGP_LPJ_T0061836.1 MGP_LPJ_G0027387.1 mouse_genomes_project 3 91377224 91385850 - MGP_LPJ_P0061836 Ubap2l protein_coding protein_coding MGP_LPJ_T0061837.1 MGP_LPJ_G0027387.1 mouse_genomes_project 3 91378288 91381711 - MGP_LPJ_P0061837 Ubap2l protein_coding protein_coding MGP_LPJ_T0063572.1 MGP_LPJ_G0027795.1 mouse_genomes_project 3 133422391 133491209 - MGP_LPJ_P0063572 Enpep protein_coding protein_coding MGP_LPJ_T0063573.1 MGP_LPJ_G0027795.1 mouse_genomes_project 3 133423493 133490753 - MGP_LPJ_P0063573 Enpep protein_coding nonsense_mediated_decay MGP_LPJ_T0063574.1 MGP_LPJ_G0027795.1 mouse_genomes_project 3 133431591 133437125 - Enpep protein_coding retained_intron MGP_LPJ_T0063575.1 MGP_LPJ_G0027795.1 mouse_genomes_project 3 133431762 133466197 - MGP_LPJ_P0063575 Enpep protein_coding nonsense_mediated_decay MGP_LPJ_T0063576.1 MGP_LPJ_G0027795.1 mouse_genomes_project 3 133455774 133491209 - Enpep protein_coding retained_intron MGP_LPJ_T0007509.1 MGP_LPJ_G0006155.1 mouse_genomes_project 3 32925449 32926229 - Gm29135 lincRNA lincRNA MGP_LPJ_T0004234.1 MGP_LPJ_G0003729.1 mouse_genomes_project 3 30889072 30889614 - Gm37592 antisense antisense MGP_LPJ_T0014266.1 MGP_LPJ_G0012357.1 mouse_genomes_project 3 134993251 134993549 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013996.1 MGP_LPJ_G0012087.1 mouse_genomes_project 3 49469935 49470524 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099454.1 MGP_LPJ_G0037717.1 mouse_genomes_project 3 154346704 154346810 - Gm26468 snRNA snRNA MGP_LPJ_T0100715.1 MGP_LPJ_G0038978.1 mouse_genomes_project 3 137054880 137054991 - Gm22322 snoRNA snoRNA MGP_LPJ_T0099459.1 MGP_LPJ_G0037722.1 mouse_genomes_project 3 162869673 162869780 - Gm23379 snRNA snRNA MGP_LPJ_T0100678.1 MGP_LPJ_G0038941.1 mouse_genomes_project 3 76202539 76202674 + Gm25846 snoRNA snoRNA MGP_LPJ_T0014074.1 MGP_LPJ_G0012165.1 mouse_genomes_project 3 71723937 71724378 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001429.1 MGP_LPJ_G0001348.1 mouse_genomes_project 3 163662806 163664166 + TEC TEC MGP_LPJ_T0062021.1 MGP_LPJ_G0027460.1 mouse_genomes_project 3 94683095 94686062 + MGP_LPJ_P0062021 protein_coding protein_coding MGP_LPJ_T0063700.1 MGP_LPJ_G0027822.1 mouse_genomes_project 3 137349194 137369510 + MGP_LPJ_P0063700 Ints12 protein_coding protein_coding MGP_LPJ_T0063701.1 MGP_LPJ_G0027822.1 mouse_genomes_project 3 137349292 137359404 + Ints12 protein_coding retained_intron MGP_LPJ_T0063702.1 MGP_LPJ_G0027822.1 mouse_genomes_project 3 137357699 137365602 + Ints12 protein_coding processed_transcript MGP_LPJ_T0062048.1 MGP_LPJ_G0027475.1 mouse_genomes_project 3 96240715 96242844 + MGP_LPJ_P0062048 C2cd4d protein_coding protein_coding MGP_LPJ_T0062049.1 MGP_LPJ_G0027475.1 mouse_genomes_project 3 96240780 96241442 + C2cd4d protein_coding retained_intron MGP_LPJ_T0063236.1 MGP_LPJ_G0027738.1 mouse_genomes_project 3 119965309 119992681 + MGP_LPJ_P0063236 Dbt protein_coding nonsense_mediated_decay MGP_LPJ_T0063237.1 MGP_LPJ_G0027738.1 mouse_genomes_project 3 119965322 120003460 + MGP_LPJ_P0063237 Dbt protein_coding protein_coding MGP_LPJ_T0063238.1 MGP_LPJ_G0027738.1 mouse_genomes_project 3 119972311 119988418 + Dbt protein_coding retained_intron MGP_LPJ_T0007727.1 MGP_LPJ_G0006320.1 mouse_genomes_project 3 138074742 138077331 - Gm6135 lincRNA lincRNA MGP_LPJ_T0064324.1 MGP_LPJ_G0027935.1 mouse_genomes_project 3 160448698 160460853 + Lrriq3 protein_coding retained_intron MGP_LPJ_T0064325.1 MGP_LPJ_G0027935.1 mouse_genomes_project 3 160448698 160545258 + MGP_LPJ_P0064325 Lrriq3 protein_coding protein_coding MGP_LPJ_T0064326.1 MGP_LPJ_G0027935.1 mouse_genomes_project 3 160448802 160532866 + MGP_LPJ_P0064326 Lrriq3 protein_coding protein_coding MGP_LPJ_T0064327.1 MGP_LPJ_G0027935.1 mouse_genomes_project 3 160448852 160495908 + MGP_LPJ_P0064327 Lrriq3 protein_coding protein_coding MGP_LPJ_T0062392.1 MGP_LPJ_G0027534.1 mouse_genomes_project 3 98277589 98288791 + Mtmr11 protein_coding retained_intron MGP_LPJ_T0062393.1 MGP_LPJ_G0027534.1 mouse_genomes_project 3 98277589 98288792 + MGP_LPJ_P0062393 Mtmr11 protein_coding protein_coding MGP_LPJ_T0062394.1 MGP_LPJ_G0027534.1 mouse_genomes_project 3 98277670 98288792 + MGP_LPJ_P0062394 Mtmr11 protein_coding nonsense_mediated_decay MGP_LPJ_T0062395.1 MGP_LPJ_G0027534.1 mouse_genomes_project 3 98277751 98279010 + Mtmr11 protein_coding retained_intron MGP_LPJ_T0062396.1 MGP_LPJ_G0027534.1 mouse_genomes_project 3 98278202 98288792 + Mtmr11 protein_coding processed_transcript MGP_LPJ_T0062397.1 MGP_LPJ_G0027534.1 mouse_genomes_project 3 98285949 98287068 + Mtmr11 protein_coding processed_transcript MGP_LPJ_T0062398.1 MGP_LPJ_G0027534.1 mouse_genomes_project 3 98287659 98288544 + Mtmr11 protein_coding processed_transcript MGP_LPJ_T0063552.1 MGP_LPJ_G0027792.1 mouse_genomes_project 3 131865383 131901132 - MGP_LPJ_P0063552 Ap1ar protein_coding protein_coding MGP_LPJ_T0063553.1 MGP_LPJ_G0027792.1 mouse_genomes_project 3 131865388 131901120 - MGP_LPJ_P0063553 Ap1ar protein_coding protein_coding MGP_LPJ_T0063554.1 MGP_LPJ_G0027792.1 mouse_genomes_project 3 131866167 131873096 - Ap1ar protein_coding retained_intron MGP_LPJ_T0063555.1 MGP_LPJ_G0027792.1 mouse_genomes_project 3 131876373 131877008 - Ap1ar protein_coding retained_intron MGP_LPJ_T0063556.1 MGP_LPJ_G0027792.1 mouse_genomes_project 3 131877572 131881713 - Ap1ar protein_coding retained_intron MGP_LPJ_T0063557.1 MGP_LPJ_G0027792.1 mouse_genomes_project 3 131879739 131881402 - Ap1ar protein_coding retained_intron MGP_LPJ_T0063558.1 MGP_LPJ_G0027792.1 mouse_genomes_project 3 131883766 131889671 - Ap1ar protein_coding retained_intron MGP_LPJ_T0063559.1 MGP_LPJ_G0027792.1 mouse_genomes_project 3 131884822 131900840 - Ap1ar protein_coding retained_intron MGP_LPJ_T0063560.1 MGP_LPJ_G0027792.1 mouse_genomes_project 3 131884823 131886809 - Ap1ar protein_coding retained_intron MGP_LPJ_T0063561.1 MGP_LPJ_G0027792.1 mouse_genomes_project 3 131884858 131900865 - MGP_LPJ_P0063561 Ap1ar protein_coding nonsense_mediated_decay MGP_LPJ_T0064040.1 MGP_LPJ_G0027889.1 mouse_genomes_project 3 150601022 150744371 + MGP_LPJ_P0064040 Ddah1 protein_coding protein_coding MGP_LPJ_T0064041.1 MGP_LPJ_G0027889.1 mouse_genomes_project 3 150660708 150738770 + Ddah1 protein_coding processed_transcript MGP_LPJ_T0062636.1 MGP_LPJ_G0027605.1 mouse_genomes_project 3 104568976 104573628 + MGP_LPJ_P0062636 Nhlh2 protein_coding protein_coding MGP_LPJ_T0062637.1 MGP_LPJ_G0027605.1 mouse_genomes_project 3 104569046 104574404 + MGP_LPJ_P0062637 Nhlh2 protein_coding protein_coding MGP_LPJ_T0062638.1 MGP_LPJ_G0027605.1 mouse_genomes_project 3 104569055 104573407 + MGP_LPJ_P0062638 Nhlh2 protein_coding protein_coding MGP_LPJ_T0014119.1 MGP_LPJ_G0012210.1 mouse_genomes_project 3 89599779 89600311 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001230.1 MGP_LPJ_G0001151.1 mouse_genomes_project 3 51126421 51129257 - TEC TEC MGP_LPJ_T0014318.1 MGP_LPJ_G0012409.1 mouse_genomes_project 3 149355191 149355753 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004335.1 MGP_LPJ_G0003803.1 mouse_genomes_project 3 102563912 102569859 - Spag17os antisense antisense MGP_LPJ_T0004336.1 MGP_LPJ_G0003803.1 mouse_genomes_project 3 102565887 102569859 - Spag17os antisense antisense MGP_LPJ_T0001384.1 MGP_LPJ_G0001303.1 mouse_genomes_project 3 137035281 137037250 + TEC TEC MGP_LPJ_T0013997.1 MGP_LPJ_G0012088.1 mouse_genomes_project 3 49820798 49821174 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010527.1 MGP_LPJ_G0008645.1 mouse_genomes_project 3 33414053 33414160 - Mir6378 miRNA miRNA MGP_LPJ_T0004347.1 MGP_LPJ_G0003810.1 mouse_genomes_project 3 107066101 107074909 + Gm43257 antisense antisense MGP_LPJ_T0007561.1 MGP_LPJ_G0006192.1 mouse_genomes_project 3 52093135 52101931 - Gm30292 lincRNA lincRNA MGP_LPJ_T0013914.1 MGP_LPJ_G0012005.1 mouse_genomes_project 3 17628287 17628670 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062306.1 MGP_LPJ_G0027521.1 mouse_genomes_project 3 97814673 97820096 - MGP_LPJ_P0062306 Ecm1 protein_coding protein_coding MGP_LPJ_T0062307.1 MGP_LPJ_G0027521.1 mouse_genomes_project 3 97814674 97820094 - MGP_LPJ_P0062307 Ecm1 protein_coding protein_coding MGP_LPJ_T0062308.1 MGP_LPJ_G0027521.1 mouse_genomes_project 3 97814675 97815545 - Ecm1 protein_coding retained_intron MGP_LPJ_T0062309.1 MGP_LPJ_G0027521.1 mouse_genomes_project 3 97816663 97820076 - MGP_LPJ_P0062309 Ecm1 protein_coding protein_coding MGP_LPJ_T0062310.1 MGP_LPJ_G0027521.1 mouse_genomes_project 3 97816675 97820094 - MGP_LPJ_P0062310 Ecm1 protein_coding protein_coding MGP_LPJ_T0062311.1 MGP_LPJ_G0027521.1 mouse_genomes_project 3 97816736 97820096 - MGP_LPJ_P0062311 Ecm1 protein_coding protein_coding MGP_LPJ_T0062312.1 MGP_LPJ_G0027521.1 mouse_genomes_project 3 97817126 97820071 - MGP_LPJ_P0062312 Ecm1 protein_coding protein_coding MGP_LPJ_T0062313.1 MGP_LPJ_G0027521.1 mouse_genomes_project 3 97817287 97820076 - MGP_LPJ_P0062313 Ecm1 protein_coding protein_coding MGP_LPJ_T0062314.1 MGP_LPJ_G0027521.1 mouse_genomes_project 3 97817876 97818750 - Ecm1 protein_coding retained_intron MGP_LPJ_T0062315.1 MGP_LPJ_G0027521.1 mouse_genomes_project 3 97818410 97820096 - MGP_LPJ_P0062315 Ecm1 protein_coding protein_coding MGP_LPJ_T0060994.1 MGP_LPJ_G0027222.1 mouse_genomes_project 3 68178456 68782522 + MGP_LPJ_P0060994 Schip1 protein_coding protein_coding MGP_LPJ_T0060995.1 MGP_LPJ_G0027222.1 mouse_genomes_project 3 68178456 68782522 + MGP_LPJ_P0060995 Schip1 protein_coding protein_coding MGP_LPJ_T0060996.1 MGP_LPJ_G0027222.1 mouse_genomes_project 3 68608967 68782539 + MGP_LPJ_P0060996 Schip1 protein_coding protein_coding MGP_LPJ_T0060997.1 MGP_LPJ_G0027222.1 mouse_genomes_project 3 68634731 68774725 + MGP_LPJ_P0060997 Schip1 protein_coding protein_coding MGP_LPJ_T0060998.1 MGP_LPJ_G0027222.1 mouse_genomes_project 3 68635448 68782521 + MGP_LPJ_P0060998 Schip1 protein_coding protein_coding MGP_LPJ_T0060999.1 MGP_LPJ_G0027222.1 mouse_genomes_project 3 68727426 68782522 + MGP_LPJ_P0060999 Schip1 protein_coding protein_coding MGP_LPJ_T0061000.1 MGP_LPJ_G0027222.1 mouse_genomes_project 3 68739361 68782522 + MGP_LPJ_P0061000 Schip1 protein_coding protein_coding MGP_LPJ_T0061001.1 MGP_LPJ_G0027222.1 mouse_genomes_project 3 68752313 68754302 + Schip1 protein_coding retained_intron MGP_LPJ_T0061743.1 MGP_LPJ_G0027374.1 mouse_genomes_project 3 90709537 90712429 - MGP_LPJ_P0061743 Cks1b protein_coding protein_coding MGP_LPJ_T0061744.1 MGP_LPJ_G0027374.1 mouse_genomes_project 3 90709622 90712063 - MGP_LPJ_P0061744 Cks1b protein_coding protein_coding MGP_LPJ_T0061745.1 MGP_LPJ_G0027374.1 mouse_genomes_project 3 90709909 90712265 - MGP_LPJ_P0061745 Cks1b protein_coding nonsense_mediated_decay MGP_LPJ_T0001405.1 MGP_LPJ_G0001324.1 mouse_genomes_project 3 156245472 156251470 - TEC TEC MGP_LPJ_T0099456.1 MGP_LPJ_G0037719.1 mouse_genomes_project 3 161170376 161170480 - Gm23038 snRNA snRNA MGP_LPJ_T0014320.1 MGP_LPJ_G0012411.1 mouse_genomes_project 3 149520240 149520765 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001390.1 MGP_LPJ_G0001309.1 mouse_genomes_project 3 139745302 139753041 - TEC TEC MGP_LPJ_T0063829.1 MGP_LPJ_G0027844.1 mouse_genomes_project 3 142352196 142361933 + MGP_LPJ_P0063829 Lamtor3 protein_coding protein_coding MGP_LPJ_T0063830.1 MGP_LPJ_G0027844.1 mouse_genomes_project 3 142352216 142353205 + Lamtor3 protein_coding retained_intron MGP_LPJ_T0063831.1 MGP_LPJ_G0027844.1 mouse_genomes_project 3 142352216 142362475 + MGP_LPJ_P0063831 Lamtor3 protein_coding protein_coding MGP_LPJ_T0063832.1 MGP_LPJ_G0027844.1 mouse_genomes_project 3 142352252 142361954 + Lamtor3 protein_coding processed_transcript MGP_LPJ_T0063833.1 MGP_LPJ_G0027844.1 mouse_genomes_project 3 142352262 142360530 + MGP_LPJ_P0063833 Lamtor3 protein_coding protein_coding MGP_LPJ_T0063834.1 MGP_LPJ_G0027844.1 mouse_genomes_project 3 142352534 142360815 + Lamtor3 protein_coding retained_intron MGP_LPJ_T0063835.1 MGP_LPJ_G0027844.1 mouse_genomes_project 3 142358512 142361869 + Lamtor3 protein_coding retained_intron MGP_LPJ_T0063836.1 MGP_LPJ_G0027844.1 mouse_genomes_project 3 142359892 142366168 + Lamtor3 protein_coding retained_intron MGP_LPJ_T0099444.1 MGP_LPJ_G0037707.1 mouse_genomes_project 3 136296629 136296736 - Gm22421 snRNA snRNA MGP_LPJ_T0013974.1 MGP_LPJ_G0012065.1 mouse_genomes_project 3 42183657 42184828 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004325.1 MGP_LPJ_G0003795.1 mouse_genomes_project 3 98360606 98366700 - antisense antisense MGP_LPJ_T0001254.1 MGP_LPJ_G0001174.1 mouse_genomes_project 3 55630656 55634272 - TEC TEC MGP_LPJ_T0060327.1 MGP_LPJ_G0027088.1 mouse_genomes_project 3 33111739 33113796 + MGP_LPJ_P0060327 Sox2 protein_coding protein_coding MGP_LPJ_T0102101.1 MGP_LPJ_G0040138.1 mouse_genomes_project 3 89975538 90062516 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0007466.1 MGP_LPJ_G0006123.1 mouse_genomes_project 3 7211706 7242096 + Gm16337 lincRNA lincRNA MGP_LPJ_T0061096.1 MGP_LPJ_G0027246.1 mouse_genomes_project 3 79695214 79790867 - MGP_LPJ_P0061096 Rapgef2 protein_coding protein_coding MGP_LPJ_T0061097.1 MGP_LPJ_G0027246.1 mouse_genomes_project 3 79695226 79791760 - MGP_LPJ_P0061097 Rapgef2 protein_coding protein_coding MGP_LPJ_T0061098.1 MGP_LPJ_G0027246.1 mouse_genomes_project 3 79695229 79938529 - MGP_LPJ_P0061098 Rapgef2 protein_coding protein_coding MGP_LPJ_T0061099.1 MGP_LPJ_G0027246.1 mouse_genomes_project 3 79750009 79820950 - Rapgef2 protein_coding retained_intron MGP_LPJ_T0061100.1 MGP_LPJ_G0027246.1 mouse_genomes_project 3 79753109 79821052 - Rapgef2 protein_coding processed_transcript MGP_LPJ_T0061101.1 MGP_LPJ_G0027246.1 mouse_genomes_project 3 79815546 79829622 - Rapgef2 protein_coding retained_intron MGP_LPJ_T0060202.1 MGP_LPJ_G0027066.1 mouse_genomes_project 3 29105743 29177564 - MGP_LPJ_P0060202 Phc3 protein_coding protein_coding MGP_LPJ_T0060203.1 MGP_LPJ_G0027066.1 mouse_genomes_project 3 29105896 29177568 - MGP_LPJ_P0060203 Phc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0060204.1 MGP_LPJ_G0027066.1 mouse_genomes_project 3 29113156 29177568 - MGP_LPJ_P0060204 Phc3 protein_coding protein_coding MGP_LPJ_T0060205.1 MGP_LPJ_G0027066.1 mouse_genomes_project 3 29113357 29177568 - MGP_LPJ_P0060205 Phc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0060206.1 MGP_LPJ_G0027066.1 mouse_genomes_project 3 29113683 29177562 - MGP_LPJ_P0060206 Phc3 protein_coding protein_coding MGP_LPJ_T0060207.1 MGP_LPJ_G0027066.1 mouse_genomes_project 3 29113683 29177562 - MGP_LPJ_P0060207 Phc3 protein_coding protein_coding MGP_LPJ_T0060208.1 MGP_LPJ_G0027066.1 mouse_genomes_project 3 29113683 29177562 - MGP_LPJ_P0060208 Phc3 protein_coding protein_coding MGP_LPJ_T0060209.1 MGP_LPJ_G0027066.1 mouse_genomes_project 3 29127292 29140430 - Phc3 protein_coding retained_intron MGP_LPJ_T0060210.1 MGP_LPJ_G0027066.1 mouse_genomes_project 3 29136364 29177578 - MGP_LPJ_P0060210 Phc3 protein_coding protein_coding MGP_LPJ_T0060211.1 MGP_LPJ_G0027066.1 mouse_genomes_project 3 29165614 29174097 - Phc3 protein_coding retained_intron MGP_LPJ_T0014124.1 MGP_LPJ_G0012215.1 mouse_genomes_project 3 92111274 92112008 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014301.1 MGP_LPJ_G0012392.1 mouse_genomes_project 3 142949924 142950150 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102119.1 MGP_LPJ_G0040156.1 mouse_genomes_project 3 109217101 109218203 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0063370.1 MGP_LPJ_G0027763.1 mouse_genomes_project 3 125799609 125941586 + MGP_LPJ_P0063370 Abca4 protein_coding protein_coding MGP_LPJ_T0063371.1 MGP_LPJ_G0027763.1 mouse_genomes_project 3 125801685 125856136 + Abca4 protein_coding processed_transcript MGP_LPJ_T0063372.1 MGP_LPJ_G0027763.1 mouse_genomes_project 3 125831569 125845048 + Abca4 protein_coding processed_transcript MGP_LPJ_T0063373.1 MGP_LPJ_G0027763.1 mouse_genomes_project 3 125879483 125887992 + Abca4 protein_coding retained_intron MGP_LPJ_T0063374.1 MGP_LPJ_G0027763.1 mouse_genomes_project 3 125881197 125885803 + Abca4 protein_coding retained_intron MGP_LPJ_T0063375.1 MGP_LPJ_G0027763.1 mouse_genomes_project 3 125891336 125941588 + MGP_LPJ_P0063375 Abca4 protein_coding protein_coding MGP_LPJ_T0063376.1 MGP_LPJ_G0027763.1 mouse_genomes_project 3 125923436 125926207 + Abca4 protein_coding retained_intron MGP_LPJ_T0063377.1 MGP_LPJ_G0027763.1 mouse_genomes_project 3 125925705 125931866 + Abca4 protein_coding retained_intron MGP_LPJ_T0063378.1 MGP_LPJ_G0027763.1 mouse_genomes_project 3 125931479 125932533 + Abca4 protein_coding processed_transcript MGP_LPJ_T0063379.1 MGP_LPJ_G0027763.1 mouse_genomes_project 3 125934538 125941650 + Abca4 protein_coding retained_intron MGP_LPJ_T0063848.1 MGP_LPJ_G0027849.1 mouse_genomes_project 3 142534256 142573585 - MGP_LPJ_P0063848 Mttp protein_coding protein_coding MGP_LPJ_T0063849.1 MGP_LPJ_G0027849.1 mouse_genomes_project 3 142535449 142573508 - MGP_LPJ_P0063849 Mttp protein_coding unknown_likely_coding MGP_LPJ_T0063850.1 MGP_LPJ_G0027849.1 mouse_genomes_project 3 142535449 142587056 - MGP_LPJ_P0063850 Mttp protein_coding protein_coding MGP_LPJ_T0063851.1 MGP_LPJ_G0027849.1 mouse_genomes_project 3 142585930 142588634 - Mttp protein_coding retained_intron MGP_LPJ_T0014165.1 MGP_LPJ_G0012256.1 mouse_genomes_project 3 101956411 101957121 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014308.1 MGP_LPJ_G0012399.1 mouse_genomes_project 3 144666538 144667919 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100701.1 MGP_LPJ_G0038964.1 mouse_genomes_project 3 110983572 110983703 + Gm25592 snoRNA snoRNA MGP_LPJ_T0102086.1 MGP_LPJ_G0040123.1 mouse_genomes_project 3 64109811 64128910 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0063130.1 MGP_LPJ_G0027714.1 mouse_genomes_project 3 111911222 111922056 - MGP_LPJ_P0063130 Prpf38b protein_coding nonsense_mediated_decay MGP_LPJ_T0063131.1 MGP_LPJ_G0027714.1 mouse_genomes_project 3 111911224 111922087 - MGP_LPJ_P0063131 Prpf38b protein_coding protein_coding MGP_LPJ_T0063132.1 MGP_LPJ_G0027714.1 mouse_genomes_project 3 111911564 111921828 - MGP_LPJ_P0063132 Prpf38b protein_coding nonsense_mediated_decay MGP_LPJ_T0063133.1 MGP_LPJ_G0027714.1 mouse_genomes_project 3 111912678 111915945 - Prpf38b protein_coding retained_intron MGP_LPJ_T0063134.1 MGP_LPJ_G0027714.1 mouse_genomes_project 3 111913865 111916478 - Prpf38b protein_coding processed_transcript MGP_LPJ_T0063135.1 MGP_LPJ_G0027714.1 mouse_genomes_project 3 111914010 111918341 - Prpf38b protein_coding processed_transcript MGP_LPJ_T0063136.1 MGP_LPJ_G0027714.1 mouse_genomes_project 3 111916920 111922070 - Prpf38b protein_coding retained_intron MGP_LPJ_T0063137.1 MGP_LPJ_G0027714.1 mouse_genomes_project 3 111916923 111920989 - Prpf38b protein_coding retained_intron MGP_LPJ_T0062196.1 MGP_LPJ_G0027501.1 mouse_genomes_project 3 97130414 97133254 - MGP_LPJ_P0062196 Tnfaip8l2 protein_coding protein_coding MGP_LPJ_T0061558.1 MGP_LPJ_G0027343.1 mouse_genomes_project 3 89908471 89917235 + MGP_LPJ_P0061558 Rit1 protein_coding protein_coding MGP_LPJ_T0061559.1 MGP_LPJ_G0027343.1 mouse_genomes_project 3 89908472 89920212 + MGP_LPJ_P0061559 Rit1 protein_coding protein_coding MGP_LPJ_T0061560.1 MGP_LPJ_G0027343.1 mouse_genomes_project 3 89908476 89909603 + Rit1 protein_coding retained_intron MGP_LPJ_T0061561.1 MGP_LPJ_G0027343.1 mouse_genomes_project 3 89908489 89924344 + MGP_LPJ_P0061561 Rit1 protein_coding nonsense_mediated_decay MGP_LPJ_T0061562.1 MGP_LPJ_G0027343.1 mouse_genomes_project 3 89908493 89924352 + Rit1 protein_coding retained_intron MGP_LPJ_T0061563.1 MGP_LPJ_G0027343.1 mouse_genomes_project 3 89908494 89920418 + MGP_LPJ_P0061563 Rit1 protein_coding nonsense_mediated_decay MGP_LPJ_T0061564.1 MGP_LPJ_G0027343.1 mouse_genomes_project 3 89908506 89917185 + Rit1 protein_coding retained_intron MGP_LPJ_T0007767.1 MGP_LPJ_G0006355.1 mouse_genomes_project 3 148987772 148988865 + Gm43446 lincRNA lincRNA MGP_LPJ_T0061692.1 MGP_LPJ_G0027363.1 mouse_genomes_project 3 90542690 90550195 + MGP_LPJ_P0061692 Dpm3 protein_coding protein_coding MGP_LPJ_T0061693.1 MGP_LPJ_G0027363.1 mouse_genomes_project 3 90549669 90550195 + MGP_LPJ_P0061693 Dpm3 protein_coding protein_coding MGP_LPJ_T0061694.1 MGP_LPJ_G0027363.1 mouse_genomes_project 3 90549756 90550197 + Dpm3 protein_coding retained_intron MGP_LPJ_T0060041.1 MGP_LPJ_G0027036.1 mouse_genomes_project 3 17911930 17983991 + MGP_LPJ_P0060041 Hltf protein_coding protein_coding MGP_LPJ_T0060042.1 MGP_LPJ_G0027036.1 mouse_genomes_project 3 17911930 17982782 + MGP_LPJ_P0060042 Hltf protein_coding nonsense_mediated_decay MGP_LPJ_T0060043.1 MGP_LPJ_G0027036.1 mouse_genomes_project 3 17911939 17973163 + Hltf protein_coding retained_intron MGP_LPJ_T0060044.1 MGP_LPJ_G0027036.1 mouse_genomes_project 3 17911972 17924337 + Hltf protein_coding retained_intron MGP_LPJ_T0060045.1 MGP_LPJ_G0027036.1 mouse_genomes_project 3 17912107 17983994 + MGP_LPJ_P0060045 Hltf protein_coding unknown_likely_coding MGP_LPJ_T0060046.1 MGP_LPJ_G0027036.1 mouse_genomes_project 3 17912413 17983977 + MGP_LPJ_P0060046 Hltf protein_coding nonsense_mediated_decay MGP_LPJ_T0060047.1 MGP_LPJ_G0027036.1 mouse_genomes_project 3 17971443 17983991 + Hltf protein_coding retained_intron MGP_LPJ_T0099402.1 MGP_LPJ_G0037665.1 mouse_genomes_project 3 68699131 68699320 - Gm22073 snRNA snRNA MGP_LPJ_T0001218.1 MGP_LPJ_G0001140.1 mouse_genomes_project 3 50515046 50515462 - TEC TEC MGP_LPJ_T0014108.1 MGP_LPJ_G0012199.1 mouse_genomes_project 3 86873504 86873979 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014142.1 MGP_LPJ_G0012233.1 mouse_genomes_project 3 96335278 96336181 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004245.1 MGP_LPJ_G0003736.1 mouse_genomes_project 3 34756910 34759222 + Gm43255 antisense antisense MGP_LPJ_T0060487.1 MGP_LPJ_G0027118.1 mouse_genomes_project 3 39507000 39523738 + MGP_LPJ_P0060487 Plk4 protein_coding protein_coding MGP_LPJ_T0060488.1 MGP_LPJ_G0027118.1 mouse_genomes_project 3 39507009 39515268 + Plk4 protein_coding retained_intron MGP_LPJ_T0060489.1 MGP_LPJ_G0027118.1 mouse_genomes_project 3 39507023 39508605 + Plk4 protein_coding retained_intron MGP_LPJ_T0060490.1 MGP_LPJ_G0027118.1 mouse_genomes_project 3 39507023 39523606 + MGP_LPJ_P0060490 Plk4 protein_coding nonsense_mediated_decay MGP_LPJ_T0060491.1 MGP_LPJ_G0027118.1 mouse_genomes_project 3 39507031 39513031 + Plk4 protein_coding retained_intron MGP_LPJ_T0060492.1 MGP_LPJ_G0027118.1 mouse_genomes_project 3 39507035 39523738 + MGP_LPJ_P0060492 Plk4 protein_coding protein_coding MGP_LPJ_T0060493.1 MGP_LPJ_G0027118.1 mouse_genomes_project 3 39507235 39523272 + MGP_LPJ_P0060493 Plk4 protein_coding protein_coding MGP_LPJ_T0060494.1 MGP_LPJ_G0027118.1 mouse_genomes_project 3 39507762 39511979 + MGP_LPJ_P0060494 Plk4 protein_coding protein_coding MGP_LPJ_T0060495.1 MGP_LPJ_G0027118.1 mouse_genomes_project 3 39508444 39509026 + Plk4 protein_coding retained_intron MGP_LPJ_T0060496.1 MGP_LPJ_G0027118.1 mouse_genomes_project 3 39519592 39523737 + MGP_LPJ_P0060496 Plk4 protein_coding protein_coding MGP_LPJ_T0101326.1 MGP_LPJ_G0039538.1 mouse_genomes_project 3 96211759 96212456 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101327.1 MGP_LPJ_G0039538.1 mouse_genomes_project 3 96211935 96212698 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0100654.1 MGP_LPJ_G0038917.1 mouse_genomes_project 3 11932158 11932283 - Gm23112 snoRNA snoRNA MGP_LPJ_T0061403.1 MGP_LPJ_G0027318.1 mouse_genomes_project 3 89188555 89233355 + MGP_LPJ_P0061403 Iqgap3 protein_coding protein_coding MGP_LPJ_T0061404.1 MGP_LPJ_G0027318.1 mouse_genomes_project 3 89188604 89197022 + Iqgap3 protein_coding retained_intron MGP_LPJ_T0061405.1 MGP_LPJ_G0027318.1 mouse_genomes_project 3 89188612 89220657 + MGP_LPJ_P0061405 Iqgap3 protein_coding nonsense_mediated_decay MGP_LPJ_T0061406.1 MGP_LPJ_G0027318.1 mouse_genomes_project 3 89195619 89197015 + Iqgap3 protein_coding retained_intron MGP_LPJ_T0061407.1 MGP_LPJ_G0027318.1 mouse_genomes_project 3 89215428 89233351 + MGP_LPJ_P0061407 Iqgap3 protein_coding protein_coding MGP_LPJ_T0061408.1 MGP_LPJ_G0027318.1 mouse_genomes_project 3 89219382 89224471 + Iqgap3 protein_coding retained_intron MGP_LPJ_T0062935.1 MGP_LPJ_G0027667.1 mouse_genomes_project 3 110075659 110090445 + MGP_LPJ_P0062935 Kcna10 protein_coding protein_coding MGP_LPJ_T0062936.1 MGP_LPJ_G0027667.1 mouse_genomes_project 3 110075747 110081047 + Kcna10 protein_coding processed_transcript MGP_LPJ_T0013882.1 MGP_LPJ_G0011973.1 mouse_genomes_project 3 8532659 8533413 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004349.1 MGP_LPJ_G0003812.1 mouse_genomes_project 3 108194005 108205756 - Kcnd3os antisense antisense MGP_LPJ_T0004350.1 MGP_LPJ_G0003812.1 mouse_genomes_project 3 108202223 108206978 - Kcnd3os antisense antisense MGP_LPJ_T0001182.1 MGP_LPJ_G0001104.1 mouse_genomes_project 3 34500658 34504095 - TEC TEC MGP_LPJ_T0014329.1 MGP_LPJ_G0012420.1 mouse_genomes_project 3 154213966 154214425 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014264.1 MGP_LPJ_G0012355.1 mouse_genomes_project 3 134292151 134292502 + processed_pseudogene processed_pseudogene MGP_LPJ_T0061628.1 MGP_LPJ_G0027355.1 mouse_genomes_project 3 90456987 90462280 + MGP_LPJ_P0061628 Scamp3 protein_coding protein_coding MGP_LPJ_T0061629.1 MGP_LPJ_G0027355.1 mouse_genomes_project 3 90457004 90462280 + MGP_LPJ_P0061629 Scamp3 protein_coding protein_coding MGP_LPJ_T0061630.1 MGP_LPJ_G0027355.1 mouse_genomes_project 3 90457010 90459180 + Scamp3 protein_coding retained_intron MGP_LPJ_T0061631.1 MGP_LPJ_G0027355.1 mouse_genomes_project 3 90457034 90462278 + MGP_LPJ_P0061631 Scamp3 protein_coding protein_coding MGP_LPJ_T0061632.1 MGP_LPJ_G0027355.1 mouse_genomes_project 3 90457045 90458967 + Scamp3 protein_coding retained_intron MGP_LPJ_T0061633.1 MGP_LPJ_G0027355.1 mouse_genomes_project 3 90457051 90459179 + Scamp3 protein_coding retained_intron MGP_LPJ_T0061634.1 MGP_LPJ_G0027355.1 mouse_genomes_project 3 90457135 90460791 + Scamp3 protein_coding retained_intron MGP_LPJ_T0061635.1 MGP_LPJ_G0027355.1 mouse_genomes_project 3 90457272 90459900 + Scamp3 protein_coding retained_intron MGP_LPJ_T0014080.1 MGP_LPJ_G0012171.1 mouse_genomes_project 3 72941248 72941762 - processed_pseudogene processed_pseudogene MGP_LPJ_T0062509.1 MGP_LPJ_G0027567.1 mouse_genomes_project 3 99613884 99614847 - MGP_LPJ_P0062509 Olfr1402 protein_coding protein_coding MGP_LPJ_T0013899.1 MGP_LPJ_G0011990.1 mouse_genomes_project 3 12723948 12724932 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010560.1 MGP_LPJ_G0008678.1 mouse_genomes_project 3 101634484 101634594 - Mir6481 miRNA miRNA MGP_LPJ_T0060992.1 MGP_LPJ_G0027221.1 mouse_genomes_project 3 67996918 68782524 + MGP_LPJ_P0060992 Gm21949 protein_coding protein_coding MGP_LPJ_T0060710.1 MGP_LPJ_G0027153.1 mouse_genomes_project 3 54139364 54155816 + MGP_LPJ_P0060710 Alg5 protein_coding protein_coding MGP_LPJ_T0060711.1 MGP_LPJ_G0027153.1 mouse_genomes_project 3 54139384 54157339 + MGP_LPJ_P0060711 Alg5 protein_coding nonsense_mediated_decay MGP_LPJ_T0060712.1 MGP_LPJ_G0027153.1 mouse_genomes_project 3 54139392 54151450 + MGP_LPJ_P0060712 Alg5 protein_coding nonsense_mediated_decay MGP_LPJ_T0060713.1 MGP_LPJ_G0027153.1 mouse_genomes_project 3 54139398 54143660 + Alg5 protein_coding retained_intron MGP_LPJ_T0061267.1 MGP_LPJ_G0027287.1 mouse_genomes_project 3 86934486 87053044 + Sh3d19 protein_coding processed_transcript MGP_LPJ_T0061269.1 MGP_LPJ_G0027287.1 mouse_genomes_project 3 87008548 87052800 + Sh3d19 protein_coding processed_transcript MGP_LPJ_T0061270.1 MGP_LPJ_G0027287.1 mouse_genomes_project 3 87010286 87053088 + Sh3d19 protein_coding processed_transcript MGP_LPJ_T0061271.1 MGP_LPJ_G0027287.1 mouse_genomes_project 3 87010394 87053077 + Sh3d19 protein_coding processed_transcript MGP_LPJ_T0061272.1 MGP_LPJ_G0027287.1 mouse_genomes_project 3 87040449 87101784 + MGP_LPJ_P0061272 Sh3d19 protein_coding protein_coding MGP_LPJ_T0061273.1 MGP_LPJ_G0027287.1 mouse_genomes_project 3 87053939 87101780 + MGP_LPJ_P0061273 Sh3d19 protein_coding protein_coding MGP_LPJ_T0061274.1 MGP_LPJ_G0027287.1 mouse_genomes_project 3 87096596 87100372 + Sh3d19 protein_coding retained_intron MGP_LPJ_T0099453.1 MGP_LPJ_G0037716.1 mouse_genomes_project 3 151271698 151271801 - Gm22078 snRNA snRNA MGP_LPJ_T0013855.1 MGP_LPJ_G0011946.1 mouse_genomes_project 3 2136767 2137733 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060227.1 MGP_LPJ_G0027071.1 mouse_genomes_project 3 29939797 29978932 - MGP_LPJ_P0060227 protein_coding protein_coding MGP_LPJ_T0098580.1 MGP_LPJ_G0036854.1 mouse_genomes_project 3 107323878 107327223 + sense_intronic sense_intronic MGP_LPJ_T0099430.1 MGP_LPJ_G0037693.1 mouse_genomes_project 3 105531863 105532028 - Gm22826 snRNA snRNA MGP_LPJ_T0007468.1 MGP_LPJ_G0006125.1 mouse_genomes_project 3 9363802 9374941 - lincRNA lincRNA MGP_LPJ_T0098539.1 MGP_LPJ_G0036813.1 mouse_genomes_project 3 96295192 96300078 + Gm42463 sense_intronic sense_intronic MGP_LPJ_T0063694.1 MGP_LPJ_G0027821.1 mouse_genomes_project 3 137245161 137349180 - MGP_LPJ_P0063694 Gstcd protein_coding protein_coding MGP_LPJ_T0063695.1 MGP_LPJ_G0027821.1 mouse_genomes_project 3 137246175 137349388 - MGP_LPJ_P0063695 Gstcd protein_coding protein_coding MGP_LPJ_T0063696.1 MGP_LPJ_G0027821.1 mouse_genomes_project 3 137256031 137265555 - Gstcd protein_coding retained_intron MGP_LPJ_T0063697.1 MGP_LPJ_G0027821.1 mouse_genomes_project 3 137258707 137349102 - Gstcd protein_coding processed_transcript MGP_LPJ_T0063698.1 MGP_LPJ_G0027821.1 mouse_genomes_project 3 137338593 137349133 - Gstcd protein_coding retained_intron MGP_LPJ_T0063699.1 MGP_LPJ_G0027821.1 mouse_genomes_project 3 137338788 137340493 - Gstcd protein_coding retained_intron MGP_LPJ_T0014238.1 MGP_LPJ_G0012329.1 mouse_genomes_project 3 124943519 124944122 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060180.1 MGP_LPJ_G0027061.1 mouse_genomes_project 3 28826910 28855090 + MGP_LPJ_P0060180 Lrriq4 protein_coding protein_coding MGP_LPJ_T0060181.1 MGP_LPJ_G0027061.1 mouse_genomes_project 3 28827733 28854958 + MGP_LPJ_P0060181 Lrriq4 protein_coding protein_coding MGP_LPJ_T0060182.1 MGP_LPJ_G0027061.1 mouse_genomes_project 3 28830289 28854958 + MGP_LPJ_P0060182 Lrriq4 protein_coding protein_coding MGP_LPJ_T0100658.1 MGP_LPJ_G0038921.1 mouse_genomes_project 3 25896515 25896676 + Gm26040 snoRNA snoRNA MGP_LPJ_T0001361.1 MGP_LPJ_G0001281.1 mouse_genomes_project 3 131141007 131143538 - TEC TEC MGP_LPJ_T0099382.1 MGP_LPJ_G0037645.1 mouse_genomes_project 3 38415283 38415443 + Gm23796 snRNA snRNA MGP_LPJ_T0013907.1 MGP_LPJ_G0011998.1 mouse_genomes_project 3 16351040 16351452 + processed_pseudogene processed_pseudogene MGP_LPJ_T0059834.1 MGP_LPJ_G0026975.1 mouse_genomes_project 3 1892407 1899586 - MGP_LPJ_P0059834 protein_coding protein_coding MGP_LPJ_T0059841.1 MGP_LPJ_G0026975.1 mouse_genomes_project 3 1895797 1902640 - MGP_LPJ_P0059841 protein_coding protein_coding MGP_LPJ_T0064348.1 MGP_LPJ_G0027940.1 mouse_genomes_project 3 163437626 163492926 + MGP_LPJ_P0064348 Ankrd13c protein_coding nonsense_mediated_decay MGP_LPJ_T0064349.1 MGP_LPJ_G0027940.1 mouse_genomes_project 3 163437801 163491413 + MGP_LPJ_P0064349 Ankrd13c protein_coding protein_coding MGP_LPJ_T0064350.1 MGP_LPJ_G0027940.1 mouse_genomes_project 3 163437801 163493532 + MGP_LPJ_P0064350 Ankrd13c protein_coding protein_coding MGP_LPJ_T0064351.1 MGP_LPJ_G0027940.1 mouse_genomes_project 3 163437853 163492335 + Ankrd13c protein_coding retained_intron MGP_LPJ_T0064352.1 MGP_LPJ_G0027940.1 mouse_genomes_project 3 163473824 163480333 + Ankrd13c protein_coding retained_intron MGP_LPJ_T0064353.1 MGP_LPJ_G0027940.1 mouse_genomes_project 3 163477008 163489502 + Ankrd13c protein_coding retained_intron MGP_LPJ_T0064354.1 MGP_LPJ_G0027940.1 mouse_genomes_project 3 163479223 163486622 + Ankrd13c protein_coding processed_transcript MGP_LPJ_T0064355.1 MGP_LPJ_G0027940.1 mouse_genomes_project 3 163479801 163486592 + Ankrd13c protein_coding retained_intron MGP_LPJ_T0064356.1 MGP_LPJ_G0027940.1 mouse_genomes_project 3 163484020 163488599 + Ankrd13c protein_coding retained_intron MGP_LPJ_T0064357.1 MGP_LPJ_G0027940.1 mouse_genomes_project 3 163484900 163486638 + Ankrd13c protein_coding retained_intron MGP_LPJ_T0061188.1 MGP_LPJ_G0027267.1 mouse_genomes_project 3 83816062 83824250 + MGP_LPJ_P0061188 Fgg protein_coding protein_coding MGP_LPJ_T0061189.1 MGP_LPJ_G0027267.1 mouse_genomes_project 3 83816199 83822915 + MGP_LPJ_P0061189 Fgg protein_coding protein_coding MGP_LPJ_T0063948.1 MGP_LPJ_G0027870.1 mouse_genomes_project 3 147257158 147274823 + MGP_LPJ_P0063948 Gbp2 protein_coding protein_coding MGP_LPJ_T0063949.1 MGP_LPJ_G0027870.1 mouse_genomes_project 3 147257191 147267401 + MGP_LPJ_P0063949 Gbp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0004221.1 MGP_LPJ_G0003721.1 mouse_genomes_project 3 17057809 17071440 + Gm16093 antisense antisense MGP_LPJ_T0013916.1 MGP_LPJ_G0012007.1 mouse_genomes_project 3 18262925 18263898 - processed_pseudogene processed_pseudogene MGP_LPJ_T0063013.1 MGP_LPJ_G0027690.1 mouse_genomes_project 3 111025689 111037183 - Ampd2 protein_coding retained_intron MGP_LPJ_T0063014.1 MGP_LPJ_G0027690.1 mouse_genomes_project 3 111025689 111038255 - MGP_LPJ_P0063014 Ampd2 protein_coding protein_coding MGP_LPJ_T0063015.1 MGP_LPJ_G0027690.1 mouse_genomes_project 3 111025691 111038279 - MGP_LPJ_P0063015 Ampd2 protein_coding protein_coding MGP_LPJ_T0063016.1 MGP_LPJ_G0027690.1 mouse_genomes_project 3 111025714 111037027 - MGP_LPJ_P0063016 Ampd2 protein_coding protein_coding MGP_LPJ_T0063017.1 MGP_LPJ_G0027690.1 mouse_genomes_project 3 111026371 111027098 - Ampd2 protein_coding retained_intron MGP_LPJ_T0063018.1 MGP_LPJ_G0027690.1 mouse_genomes_project 3 111026991 111028060 - Ampd2 protein_coding retained_intron MGP_LPJ_T0063019.1 MGP_LPJ_G0027690.1 mouse_genomes_project 3 111028240 111029523 - Ampd2 protein_coding retained_intron MGP_LPJ_T0063020.1 MGP_LPJ_G0027690.1 mouse_genomes_project 3 111030095 111031337 - Ampd2 protein_coding retained_intron MGP_LPJ_T0063021.1 MGP_LPJ_G0027690.1 mouse_genomes_project 3 111030259 111032246 - Ampd2 protein_coding retained_intron MGP_LPJ_T0063022.1 MGP_LPJ_G0027690.1 mouse_genomes_project 3 111031549 111037023 - Ampd2 protein_coding retained_intron MGP_LPJ_T0098578.1 MGP_LPJ_G0036852.1 mouse_genomes_project 3 107178698 107179908 - 4930509H03Rik sense_intronic sense_intronic MGP_LPJ_T0059898.1 MGP_LPJ_G0026994.1 mouse_genomes_project 3 6846644 7054842 - MGP_LPJ_P0059898 Zfp704 protein_coding protein_coding MGP_LPJ_T0059899.1 MGP_LPJ_G0026994.1 mouse_genomes_project 3 6857916 7007439 - MGP_LPJ_P0059899 Zfp704 protein_coding protein_coding MGP_LPJ_T0059900.1 MGP_LPJ_G0026994.1 mouse_genomes_project 3 6858320 6860661 - Zfp704 protein_coding retained_intron MGP_LPJ_T0061588.1 MGP_LPJ_G0027348.1 mouse_genomes_project 3 90210800 90347339 + MGP_LPJ_P0061588 Ash1l protein_coding protein_coding MGP_LPJ_T0061590.1 MGP_LPJ_G0027348.1 mouse_genomes_project 3 90228233 90347337 + MGP_LPJ_P0061590 Ash1l protein_coding protein_coding MGP_LPJ_T0061591.1 MGP_LPJ_G0027348.1 mouse_genomes_project 3 90291049 90296135 + Ash1l protein_coding retained_intron MGP_LPJ_T0061592.1 MGP_LPJ_G0027348.1 mouse_genomes_project 3 90320630 90323609 + Ash1l protein_coding retained_intron MGP_LPJ_T0060011.1 MGP_LPJ_G0027032.1 mouse_genomes_project 3 17497694 17546157 + MGP_LPJ_P0060011 Trim55 protein_coding protein_coding MGP_LPJ_T0060012.1 MGP_LPJ_G0027032.1 mouse_genomes_project 3 17497728 17503263 + Trim55 protein_coding processed_transcript MGP_LPJ_T0061421.1 MGP_LPJ_G0027323.1 mouse_genomes_project 3 89440906 89467781 + MGP_LPJ_P0061421 Cct3 protein_coding protein_coding MGP_LPJ_T0061422.1 MGP_LPJ_G0027323.1 mouse_genomes_project 3 89440907 89442738 + Cct3 protein_coding retained_intron MGP_LPJ_T0061423.1 MGP_LPJ_G0027323.1 mouse_genomes_project 3 89440913 89467521 + Cct3 protein_coding retained_intron MGP_LPJ_T0061424.1 MGP_LPJ_G0027323.1 mouse_genomes_project 3 89440916 89459981 + Cct3 protein_coding retained_intron MGP_LPJ_T0061425.1 MGP_LPJ_G0027323.1 mouse_genomes_project 3 89440943 89467521 + Cct3 protein_coding retained_intron MGP_LPJ_T0061426.1 MGP_LPJ_G0027323.1 mouse_genomes_project 3 89440964 89467780 + MGP_LPJ_P0061426 Cct3 protein_coding protein_coding MGP_LPJ_T0061427.1 MGP_LPJ_G0027323.1 mouse_genomes_project 3 89440978 89467521 + MGP_LPJ_P0061427 Cct3 protein_coding protein_coding MGP_LPJ_T0061428.1 MGP_LPJ_G0027323.1 mouse_genomes_project 3 89448504 89466664 + MGP_LPJ_P0061428 Cct3 protein_coding protein_coding MGP_LPJ_T0061429.1 MGP_LPJ_G0027323.1 mouse_genomes_project 3 89467008 89467778 + Cct3 protein_coding retained_intron MGP_LPJ_T0061430.1 MGP_LPJ_G0027323.1 mouse_genomes_project 3 89467061 89467779 + MGP_LPJ_P0061430 Cct3 protein_coding protein_coding MGP_LPJ_T0060647.1 MGP_LPJ_G0027142.1 mouse_genomes_project 3 52359304 52577277 + MGP_LPJ_P0060647 Lhfp protein_coding protein_coding MGP_LPJ_T0060648.1 MGP_LPJ_G0027142.1 mouse_genomes_project 3 52359335 52577273 + Lhfp protein_coding processed_transcript MGP_LPJ_T0060649.1 MGP_LPJ_G0027142.1 mouse_genomes_project 3 52359359 52577277 + MGP_LPJ_P0060649 Lhfp protein_coding protein_coding MGP_LPJ_T0060650.1 MGP_LPJ_G0027142.1 mouse_genomes_project 3 52540564 52543822 + Lhfp protein_coding retained_intron MGP_LPJ_T0013886.1 MGP_LPJ_G0011977.1 mouse_genomes_project 3 10201618 10202195 + processed_pseudogene processed_pseudogene MGP_LPJ_T0061892.1 MGP_LPJ_G0027397.1 mouse_genomes_project 3 91659412 91728975 + MGP_LPJ_P0061892 Gatad2b protein_coding protein_coding MGP_LPJ_T0061893.1 MGP_LPJ_G0027397.1 mouse_genomes_project 3 91693008 91723154 + Gatad2b protein_coding retained_intron MGP_LPJ_T0061894.1 MGP_LPJ_G0027397.1 mouse_genomes_project 3 91709988 91713268 + Gatad2b protein_coding retained_intron MGP_LPJ_T0061895.1 MGP_LPJ_G0027397.1 mouse_genomes_project 3 91710613 91728722 + MGP_LPJ_P0061895 Gatad2b protein_coding protein_coding MGP_LPJ_T0061896.1 MGP_LPJ_G0027397.1 mouse_genomes_project 3 91710615 91728715 + Gatad2b protein_coding retained_intron MGP_LPJ_T0061897.1 MGP_LPJ_G0027397.1 mouse_genomes_project 3 91710615 91733741 + MGP_LPJ_P0061897 Gatad2b protein_coding protein_coding MGP_LPJ_T0061898.1 MGP_LPJ_G0027397.1 mouse_genomes_project 3 91710615 91728681 + MGP_LPJ_P0061898 Gatad2b protein_coding protein_coding MGP_LPJ_T0061899.1 MGP_LPJ_G0027397.1 mouse_genomes_project 3 91722019 91726736 + MGP_LPJ_P0061899 Gatad2b protein_coding protein_coding MGP_LPJ_T0004395.1 MGP_LPJ_G0003840.1 mouse_genomes_project 3 133934014 133944421 + 6330410L21Rik antisense antisense MGP_LPJ_T0001379.1 MGP_LPJ_G0001298.1 mouse_genomes_project 3 135123368 135124079 + TEC TEC MGP_LPJ_T0001304.1 MGP_LPJ_G0001224.1 mouse_genomes_project 3 99465610 99466799 - TEC TEC MGP_LPJ_T0007749.1 MGP_LPJ_G0006340.1 mouse_genomes_project 3 147757429 147811613 + Gm43614 lincRNA lincRNA MGP_LPJ_T0062803.1 MGP_LPJ_G0027634.1 mouse_genomes_project 3 107469755 107480546 - MGP_LPJ_P0062803 Fam19a3 protein_coding protein_coding MGP_LPJ_T0062804.1 MGP_LPJ_G0027634.1 mouse_genomes_project 3 107480359 107484843 - Fam19a3 protein_coding processed_transcript MGP_LPJ_T0063730.1 MGP_LPJ_G0027827.1 mouse_genomes_project 3 139137826 139235443 + MGP_LPJ_P0063730 Tacr3 protein_coding protein_coding MGP_LPJ_T0001341.1 MGP_LPJ_G0001261.1 mouse_genomes_project 3 126984325 126984925 - TEC TEC MGP_LPJ_T0004414.1 MGP_LPJ_G0003851.1 mouse_genomes_project 3 142716819 142746275 - Gm16559 antisense antisense MGP_LPJ_T0063562.1 MGP_LPJ_G0027793.1 mouse_genomes_project 3 131943730 131972548 - MGP_LPJ_P0063562 5730508B09Rik protein_coding protein_coding MGP_LPJ_T0063563.1 MGP_LPJ_G0027793.1 mouse_genomes_project 3 131944352 131972512 - MGP_LPJ_P0063563 5730508B09Rik protein_coding protein_coding MGP_LPJ_T0013987.1 MGP_LPJ_G0012078.1 mouse_genomes_project 3 47105558 47106242 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007805.1 MGP_LPJ_G0006380.1 mouse_genomes_project 3 164584040 164782639 + Gm20752 lincRNA lincRNA MGP_LPJ_T0004323.1 MGP_LPJ_G0003793.1 mouse_genomes_project 3 98325903 98336573 - Gm15444 antisense antisense MGP_LPJ_T0061215.1 MGP_LPJ_G0027276.1 mouse_genomes_project 3 85033800 85187057 - MGP_LPJ_P0061215 Trim2 protein_coding protein_coding MGP_LPJ_T0061216.1 MGP_LPJ_G0027276.1 mouse_genomes_project 3 85033801 85140805 - MGP_LPJ_P0061216 Trim2 protein_coding protein_coding MGP_LPJ_T0061217.1 MGP_LPJ_G0027276.1 mouse_genomes_project 3 85033802 85100910 - MGP_LPJ_P0061217 Trim2 protein_coding protein_coding MGP_LPJ_T0061218.1 MGP_LPJ_G0027276.1 mouse_genomes_project 3 85035235 85100898 - MGP_LPJ_P0061218 Trim2 protein_coding protein_coding MGP_LPJ_T0061219.1 MGP_LPJ_G0027276.1 mouse_genomes_project 3 85036701 85091998 - MGP_LPJ_P0061219 Trim2 protein_coding protein_coding MGP_LPJ_T0061220.1 MGP_LPJ_G0027276.1 mouse_genomes_project 3 85037067 85100866 - Trim2 protein_coding retained_intron MGP_LPJ_T0061221.1 MGP_LPJ_G0027276.1 mouse_genomes_project 3 85037082 85153126 - MGP_LPJ_P0061221 Trim2 protein_coding protein_coding MGP_LPJ_T0061223.1 MGP_LPJ_G0027276.1 mouse_genomes_project 3 85052216 85066618 - Trim2 protein_coding retained_intron MGP_LPJ_T0061224.1 MGP_LPJ_G0027276.1 mouse_genomes_project 3 85064454 85100895 - Trim2 protein_coding retained_intron MGP_LPJ_T0061225.1 MGP_LPJ_G0027276.1 mouse_genomes_project 3 85066756 85067643 - Trim2 protein_coding processed_transcript MGP_LPJ_T0061226.1 MGP_LPJ_G0027276.1 mouse_genomes_project 3 85068297 85187645 - MGP_LPJ_P0061226 Trim2 protein_coding protein_coding MGP_LPJ_T0061227.1 MGP_LPJ_G0027276.1 mouse_genomes_project 3 85068308 85187694 - MGP_LPJ_P0061227 Trim2 protein_coding protein_coding MGP_LPJ_T0061228.1 MGP_LPJ_G0027276.1 mouse_genomes_project 3 85069456 85140362 - MGP_LPJ_P0061228 Trim2 protein_coding protein_coding MGP_LPJ_T0061229.1 MGP_LPJ_G0027276.1 mouse_genomes_project 3 85085629 85100882 - Trim2 protein_coding retained_intron MGP_LPJ_T0061230.1 MGP_LPJ_G0027276.1 mouse_genomes_project 3 85086938 85100895 - Trim2 protein_coding retained_intron MGP_LPJ_T0061231.1 MGP_LPJ_G0027276.1 mouse_genomes_project 3 85087540 85100895 - MGP_LPJ_P0061231 Trim2 protein_coding protein_coding MGP_LPJ_T0061232.1 MGP_LPJ_G0027276.1 mouse_genomes_project 3 85138676 85140362 - Trim2 protein_coding processed_transcript MGP_LPJ_T0061233.1 MGP_LPJ_G0027276.1 mouse_genomes_project 3 85182211 85186989 - Trim2 protein_coding processed_transcript MGP_LPJ_T0061234.1 MGP_LPJ_G0027276.1 mouse_genomes_project 3 85187093 85189125 - Trim2 protein_coding processed_transcript MGP_LPJ_T0064153.1 MGP_LPJ_G0027911.1 mouse_genomes_project 3 156941324 156945464 - MGP_LPJ_P0064153 Ifi44l protein_coding protein_coding MGP_LPJ_T0014317.1 MGP_LPJ_G0012408.1 mouse_genomes_project 3 148560867 148561692 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011558.1 MGP_LPJ_G0009676.1 mouse_genomes_project 3 84457192 84457490 - Gm22342 misc_RNA misc_RNA MGP_LPJ_T0099440.1 MGP_LPJ_G0037703.1 mouse_genomes_project 3 126253781 126253937 + Gm25153 snRNA snRNA MGP_LPJ_T0014322.1 MGP_LPJ_G0012413.1 mouse_genomes_project 3 149582768 149583405 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007602.1 MGP_LPJ_G0006224.1 mouse_genomes_project 3 81811306 81812129 + Gm42476 lincRNA lincRNA MGP_LPJ_T0059963.1 MGP_LPJ_G0027015.1 mouse_genomes_project 3 12608253 12610283 + Car3 protein_coding retained_intron MGP_LPJ_T0059964.1 MGP_LPJ_G0027015.1 mouse_genomes_project 3 12608279 12617130 + MGP_LPJ_P0059964 Car3 protein_coding protein_coding MGP_LPJ_T0059965.1 MGP_LPJ_G0027015.1 mouse_genomes_project 3 12613784 12616676 + Car3 protein_coding retained_intron MGP_LPJ_T0001381.1 MGP_LPJ_G0001300.1 mouse_genomes_project 3 135272763 135275313 - TEC TEC MGP_LPJ_T0001310.1 MGP_LPJ_G0001230.1 mouse_genomes_project 3 107384671 107384940 + TEC TEC MGP_LPJ_T0007680.1 MGP_LPJ_G0006283.1 mouse_genomes_project 3 112099637 112101464 - 4930408K08Rik lincRNA lincRNA MGP_LPJ_T0102108.1 MGP_LPJ_G0040145.1 mouse_genomes_project 3 96156106 96156298 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0064092.1 MGP_LPJ_G0027902.1 mouse_genomes_project 3 151479549 151537707 + MGP_LPJ_P0064092 Uox protein_coding protein_coding MGP_LPJ_T0064095.1 MGP_LPJ_G0027902.1 mouse_genomes_project 3 151509309 151544098 + MGP_LPJ_P0064095 Uox protein_coding protein_coding MGP_LPJ_T0064096.1 MGP_LPJ_G0027902.1 mouse_genomes_project 3 151509380 151524560 + MGP_LPJ_P0064096 Uox protein_coding protein_coding MGP_LPJ_T0064097.1 MGP_LPJ_G0027902.1 mouse_genomes_project 3 151509397 151542438 + MGP_LPJ_P0064097 Uox protein_coding protein_coding MGP_LPJ_T0064098.1 MGP_LPJ_G0027902.1 mouse_genomes_project 3 151509398 151524678 + Uox protein_coding retained_intron MGP_LPJ_T0064099.1 MGP_LPJ_G0027902.1 mouse_genomes_project 3 151522219 151524583 + Uox protein_coding retained_intron MGP_LPJ_T0014192.1 MGP_LPJ_G0012283.1 mouse_genomes_project 3 108835497 108835965 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013986.1 MGP_LPJ_G0012077.1 mouse_genomes_project 3 46494803 46495513 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007787.1 MGP_LPJ_G0006369.1 mouse_genomes_project 3 156201096 156204604 + Gm43468 lincRNA lincRNA MGP_LPJ_T0060506.1 MGP_LPJ_G0027120.1 mouse_genomes_project 3 39562485 39671717 + MGP_LPJ_P0060506 protein_coding protein_coding MGP_LPJ_T0060507.1 MGP_LPJ_G0027120.1 mouse_genomes_project 3 39609148 39673548 + MGP_LPJ_P0060507 protein_coding protein_coding MGP_LPJ_T0060508.1 MGP_LPJ_G0027120.1 mouse_genomes_project 3 39609266 39649499 + MGP_LPJ_P0060508 protein_coding protein_coding MGP_LPJ_T0060509.1 MGP_LPJ_G0027120.1 mouse_genomes_project 3 39609280 39673546 + MGP_LPJ_P0060509 protein_coding nonsense_mediated_decay MGP_LPJ_T0060510.1 MGP_LPJ_G0027120.1 mouse_genomes_project 3 39609292 39649468 + MGP_LPJ_P0060510 protein_coding nonsense_mediated_decay MGP_LPJ_T0060511.1 MGP_LPJ_G0027120.1 mouse_genomes_project 3 39609309 39656331 + MGP_LPJ_P0060511 protein_coding protein_coding MGP_LPJ_T0060512.1 MGP_LPJ_G0027120.1 mouse_genomes_project 3 39609325 39672547 + MGP_LPJ_P0060512 protein_coding protein_coding MGP_LPJ_T0060513.1 MGP_LPJ_G0027120.1 mouse_genomes_project 3 39609327 39672564 + MGP_LPJ_P0060513 protein_coding nonsense_mediated_decay MGP_LPJ_T0060514.1 MGP_LPJ_G0027120.1 mouse_genomes_project 3 39609348 39649821 + MGP_LPJ_P0060514 protein_coding protein_coding MGP_LPJ_T0060515.1 MGP_LPJ_G0027120.1 mouse_genomes_project 3 39609388 39670803 + MGP_LPJ_P0060515 protein_coding unknown_likely_coding MGP_LPJ_T0060517.1 MGP_LPJ_G0027120.1 mouse_genomes_project 3 39666037 39672105 + protein_coding processed_transcript MGP_LPJ_T0001154.1 MGP_LPJ_G0001076.1 mouse_genomes_project 3 23058884 23059078 + TEC TEC MGP_LPJ_T0098534.1 MGP_LPJ_G0036809.1 mouse_genomes_project 3 80223153 80224002 - Gm3513 sense_intronic sense_intronic MGP_LPJ_T0014335.1 MGP_LPJ_G0012426.1 mouse_genomes_project 3 158121013 158121180 - processed_pseudogene processed_pseudogene MGP_LPJ_T0059832.1 MGP_LPJ_G0026974.1 mouse_genomes_project 3 585225 754254 + MGP_LPJ_P0059832 Hnf4g protein_coding protein_coding MGP_LPJ_T0059833.1 MGP_LPJ_G0026974.1 mouse_genomes_project 3 730020 754462 + MGP_LPJ_P0059833 Hnf4g protein_coding protein_coding MGP_LPJ_T0060338.1 MGP_LPJ_G0027090.1 mouse_genomes_project 3 34423613 34464825 - MGP_LPJ_P0060338 Dcun1d1 protein_coding protein_coding MGP_LPJ_T0060339.1 MGP_LPJ_G0027090.1 mouse_genomes_project 3 34426819 34464189 - MGP_LPJ_P0060339 Dcun1d1 protein_coding nonsense_mediated_decay MGP_LPJ_T0060340.1 MGP_LPJ_G0027090.1 mouse_genomes_project 3 34427155 34452663 - MGP_LPJ_P0060340 Dcun1d1 protein_coding nonsense_mediated_decay MGP_LPJ_T0060341.1 MGP_LPJ_G0027090.1 mouse_genomes_project 3 34428011 34464140 - MGP_LPJ_P0060341 Dcun1d1 protein_coding protein_coding MGP_LPJ_T0060342.1 MGP_LPJ_G0027090.1 mouse_genomes_project 3 34429656 34463687 - MGP_LPJ_P0060342 Dcun1d1 protein_coding protein_coding MGP_LPJ_T0060343.1 MGP_LPJ_G0027090.1 mouse_genomes_project 3 34429720 34441422 - Dcun1d1 protein_coding processed_transcript MGP_LPJ_T0060344.1 MGP_LPJ_G0027090.1 mouse_genomes_project 3 34440722 34464168 - Dcun1d1 protein_coding processed_transcript MGP_LPJ_T0060345.1 MGP_LPJ_G0027090.1 mouse_genomes_project 3 34447615 34464177 - Dcun1d1 protein_coding retained_intron MGP_LPJ_T0060346.1 MGP_LPJ_G0027090.1 mouse_genomes_project 3 34450473 34461472 - MGP_LPJ_P0060346 Dcun1d1 protein_coding protein_coding MGP_LPJ_T0060347.1 MGP_LPJ_G0027090.1 mouse_genomes_project 3 34450476 34468765 - MGP_LPJ_P0060347 Dcun1d1 protein_coding protein_coding MGP_LPJ_T0060348.1 MGP_LPJ_G0027090.1 mouse_genomes_project 3 34459862 34462811 - Dcun1d1 protein_coding retained_intron MGP_LPJ_T0007784.1 MGP_LPJ_G0006367.1 mouse_genomes_project 3 154580357 154684774 - Gm31121 lincRNA lincRNA MGP_LPJ_T0014154.1 MGP_LPJ_G0012245.1 mouse_genomes_project 3 98562275 98563582 - processed_pseudogene processed_pseudogene MGP_LPJ_T0060006.1 MGP_LPJ_G0027030.1 mouse_genomes_project 3 17354354 17456387 + MGP_LPJ_P0060006 Dnajc5b protein_coding protein_coding MGP_LPJ_T0060007.1 MGP_LPJ_G0027030.1 mouse_genomes_project 3 17354374 17456517 + MGP_LPJ_P0060007 Dnajc5b protein_coding protein_coding MGP_LPJ_T0060008.1 MGP_LPJ_G0027030.1 mouse_genomes_project 3 17378548 17456405 + MGP_LPJ_P0060008 Dnajc5b protein_coding protein_coding MGP_LPJ_T0060009.1 MGP_LPJ_G0027030.1 mouse_genomes_project 3 17379124 17456516 + MGP_LPJ_P0060009 Dnajc5b protein_coding protein_coding MGP_LPJ_T0001401.1 MGP_LPJ_G0001320.1 mouse_genomes_project 3 152327258 152331836 - TEC TEC MGP_LPJ_T0013995.1 MGP_LPJ_G0012086.1 mouse_genomes_project 3 49378814 49379046 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004250.1 MGP_LPJ_G0003740.1 mouse_genomes_project 3 37589154 37604247 - C230034O21Rik antisense antisense MGP_LPJ_T0098533.1 MGP_LPJ_G0036808.1 mouse_genomes_project 3 23634918 23641774 - Gm37573 sense_intronic sense_intronic MGP_LPJ_T0061268.1 MGP_LPJ_G0027288.1 mouse_genomes_project 3 86963435 86972117 - MGP_LPJ_P0061268 Prss48 protein_coding protein_coding MGP_LPJ_T0098535.1 MGP_LPJ_G0036810.1 mouse_genomes_project 3 80346538 80350053 - Gm26984 sense_intronic sense_intronic MGP_LPJ_T0099405.1 MGP_LPJ_G0037668.1 mouse_genomes_project 3 80510590 80510693 + Gm26420 snRNA snRNA MGP_LPJ_T0014155.1 MGP_LPJ_G0012246.1 mouse_genomes_project 3 98567476 98567928 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004226.1 MGP_LPJ_G0003724.1 mouse_genomes_project 3 26896674 26904005 - Gm33051 antisense antisense MGP_LPJ_T0102094.1 MGP_LPJ_G0040131.1 mouse_genomes_project 3 80907436 80907587 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0007458.1 MGP_LPJ_G0006119.1 mouse_genomes_project 3 5248017 5278707 - 1700010I02Rik lincRNA lincRNA MGP_LPJ_T0007459.1 MGP_LPJ_G0006119.1 mouse_genomes_project 3 5248017 5278700 - 1700010I02Rik lincRNA lincRNA MGP_LPJ_T0062040.1 MGP_LPJ_G0027472.1 mouse_genomes_project 3 95309847 95319443 + MGP_LPJ_P0062040 S100a10 protein_coding protein_coding MGP_LPJ_T0062041.1 MGP_LPJ_G0027472.1 mouse_genomes_project 3 95309930 95316316 + S100a10 protein_coding retained_intron MGP_LPJ_T0062042.1 MGP_LPJ_G0027472.1 mouse_genomes_project 3 95315537 95319250 + MGP_LPJ_P0062042 S100a10 protein_coding protein_coding MGP_LPJ_T0013915.1 MGP_LPJ_G0012006.1 mouse_genomes_project 3 17779408 17779968 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011563.1 MGP_LPJ_G0009681.1 mouse_genomes_project 3 110327413 110327746 - Gm24383 misc_RNA misc_RNA MGP_LPJ_T0062887.1 MGP_LPJ_G0027655.1 mouse_genomes_project 3 108894323 108915129 + MGP_LPJ_P0062887 Chia1 protein_coding protein_coding MGP_LPJ_T0062888.1 MGP_LPJ_G0027655.1 mouse_genomes_project 3 108894484 108911168 + MGP_LPJ_P0062888 Chia1 protein_coding protein_coding MGP_LPJ_T0062889.1 MGP_LPJ_G0027655.1 mouse_genomes_project 3 108904684 108910784 + Chia1 protein_coding retained_intron MGP_LPJ_T0001347.1 MGP_LPJ_G0001267.1 mouse_genomes_project 3 129113657 129117057 - TEC TEC MGP_LPJ_T0061276.1 MGP_LPJ_G0027290.1 mouse_genomes_project 3 87193379 87527731 + MGP_LPJ_P0061276 Lrba protein_coding unknown_likely_coding MGP_LPJ_T0061277.1 MGP_LPJ_G0027290.1 mouse_genomes_project 3 87193686 87787338 + MGP_LPJ_P0061277 Lrba protein_coding protein_coding MGP_LPJ_T0061278.1 MGP_LPJ_G0027290.1 mouse_genomes_project 3 87193686 87748722 + MGP_LPJ_P0061278 Lrba protein_coding protein_coding MGP_LPJ_T0061279.1 MGP_LPJ_G0027290.1 mouse_genomes_project 3 87193686 87781519 + MGP_LPJ_P0061279 Lrba protein_coding protein_coding MGP_LPJ_T0061280.1 MGP_LPJ_G0027290.1 mouse_genomes_project 3 87331811 87333945 + Lrba protein_coding retained_intron MGP_LPJ_T0061281.1 MGP_LPJ_G0027290.1 mouse_genomes_project 3 87526419 87600743 + Lrba protein_coding retained_intron MGP_LPJ_T0061284.1 MGP_LPJ_G0027290.1 mouse_genomes_project 3 87530735 87614746 + Lrba protein_coding retained_intron MGP_LPJ_T0061285.1 MGP_LPJ_G0027290.1 mouse_genomes_project 3 87532196 87787341 + MGP_LPJ_P0061285 Lrba protein_coding protein_coding MGP_LPJ_T0007738.1 MGP_LPJ_G0006330.1 mouse_genomes_project 3 142221185 142230536 - Gm31678 lincRNA lincRNA MGP_LPJ_T0062629.1 MGP_LPJ_G0027604.1 mouse_genomes_project 3 104414660 104477932 - MGP_LPJ_P0062629 Slc22a15 protein_coding protein_coding MGP_LPJ_T0062630.1 MGP_LPJ_G0027604.1 mouse_genomes_project 3 104419286 104477988 - MGP_LPJ_P0062630 Slc22a15 protein_coding protein_coding MGP_LPJ_T0062631.1 MGP_LPJ_G0027604.1 mouse_genomes_project 3 104419310 104450845 - Slc22a15 protein_coding processed_transcript MGP_LPJ_T0062632.1 MGP_LPJ_G0027604.1 mouse_genomes_project 3 104422854 104438248 - Slc22a15 protein_coding retained_intron MGP_LPJ_T0062633.1 MGP_LPJ_G0027604.1 mouse_genomes_project 3 104424092 104477918 - MGP_LPJ_P0062633 Slc22a15 protein_coding nonsense_mediated_decay MGP_LPJ_T0062634.1 MGP_LPJ_G0027604.1 mouse_genomes_project 3 104432001 104436975 - Slc22a15 protein_coding retained_intron MGP_LPJ_T0062635.1 MGP_LPJ_G0027604.1 mouse_genomes_project 3 104474542 104477992 - Slc22a15 protein_coding processed_transcript MGP_LPJ_T0102085.1 MGP_LPJ_G0040122.1 mouse_genomes_project 3 59238580 59262966 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0014240.1 MGP_LPJ_G0012331.1 mouse_genomes_project 3 125087947 125088368 - processed_pseudogene processed_pseudogene MGP_LPJ_T0063863.1 MGP_LPJ_G0027853.1 mouse_genomes_project 3 142699033 142718201 + Adh1 protein_coding processed_transcript MGP_LPJ_T0063864.1 MGP_LPJ_G0027853.1 mouse_genomes_project 3 142713123 142727550 + MGP_LPJ_P0063864 Adh1 protein_coding protein_coding MGP_LPJ_T0063865.1 MGP_LPJ_G0027853.1 mouse_genomes_project 3 142713274 142716365 + Adh1 protein_coding retained_intron MGP_LPJ_T0063866.1 MGP_LPJ_G0027853.1 mouse_genomes_project 3 142713280 142727550 + MGP_LPJ_P0063866 Adh1 protein_coding nonsense_mediated_decay MGP_LPJ_T0063420.1 MGP_LPJ_G0027773.1 mouse_genomes_project 3 126817557 126845294 - MGP_LPJ_P0063420 Myoz2 protein_coding protein_coding MGP_LPJ_T0063421.1 MGP_LPJ_G0027773.1 mouse_genomes_project 3 126817868 126845123 - MGP_LPJ_P0063421 Myoz2 protein_coding nonsense_mediated_decay MGP_LPJ_T0063422.1 MGP_LPJ_G0027773.1 mouse_genomes_project 3 126817953 126845283 - Myoz2 protein_coding processed_transcript MGP_LPJ_T0063423.1 MGP_LPJ_G0027773.1 mouse_genomes_project 3 126826043 126845242 - Myoz2 protein_coding processed_transcript MGP_LPJ_T0063424.1 MGP_LPJ_G0027773.1 mouse_genomes_project 3 126834344 126845231 - Myoz2 protein_coding retained_intron MGP_LPJ_T0062656.1 MGP_LPJ_G0027609.1 mouse_genomes_project 3 105310697 105345742 + MGP_LPJ_P0062656 Tspan2 protein_coding protein_coding MGP_LPJ_T0062657.1 MGP_LPJ_G0027609.1 mouse_genomes_project 3 105310915 105346005 + MGP_LPJ_P0062657 Tspan2 protein_coding protein_coding MGP_LPJ_T0062658.1 MGP_LPJ_G0027609.1 mouse_genomes_project 3 105336107 105381805 + MGP_LPJ_P0062658 Tspan2 protein_coding protein_coding MGP_LPJ_T0007494.1 MGP_LPJ_G0006141.1 mouse_genomes_project 3 20167690 20179139 - Gm38324 lincRNA lincRNA MGP_LPJ_T0099460.1 MGP_LPJ_G0037723.1 mouse_genomes_project 3 165452099 165452206 - Gm23941 snRNA snRNA MGP_LPJ_T0100711.1 MGP_LPJ_G0038974.1 mouse_genomes_project 3 128389573 128389703 + Gm22900 snoRNA snoRNA MGP_LPJ_T0060845.1 MGP_LPJ_G0027185.1 mouse_genomes_project 3 58944593 58972836 - MGP_LPJ_P0060845 Igsf10 protein_coding protein_coding MGP_LPJ_T0060846.1 MGP_LPJ_G0027185.1 mouse_genomes_project 3 58945784 58972739 - MGP_LPJ_P0060846 Igsf10 protein_coding protein_coding MGP_LPJ_T0060847.1 MGP_LPJ_G0027185.1 mouse_genomes_project 3 58945784 58972974 - MGP_LPJ_P0060847 Igsf10 protein_coding protein_coding MGP_LPJ_T0060848.1 MGP_LPJ_G0027185.1 mouse_genomes_project 3 58967658 58972836 - MGP_LPJ_P0060848 Igsf10 protein_coding protein_coding MGP_LPJ_T0060798.1 MGP_LPJ_G0027172.1 mouse_genomes_project 3 57983733 58037003 + MGP_LPJ_P0060798 Tsc22d2 protein_coding protein_coding MGP_LPJ_T0060799.1 MGP_LPJ_G0027172.1 mouse_genomes_project 3 57983738 58031940 + MGP_LPJ_P0060799 Tsc22d2 protein_coding protein_coding MGP_LPJ_T0060800.1 MGP_LPJ_G0027172.1 mouse_genomes_project 3 57984896 57987918 + Tsc22d2 protein_coding retained_intron MGP_LPJ_T0060801.1 MGP_LPJ_G0027172.1 mouse_genomes_project 3 57986502 58030528 + MGP_LPJ_P0060801 Tsc22d2 protein_coding nonsense_mediated_decay MGP_LPJ_T0060893.1 MGP_LPJ_G0027197.1 mouse_genomes_project 3 62363260 62438009 - MGP_LPJ_P0060893 Gpr149 protein_coding protein_coding MGP_LPJ_T0060894.1 MGP_LPJ_G0027197.1 mouse_genomes_project 3 62426940 62435634 - Gpr149 protein_coding retained_intron MGP_LPJ_T0007716.1 MGP_LPJ_G0006310.1 mouse_genomes_project 3 134995056 134996842 + Gm43522 lincRNA lincRNA MGP_LPJ_T0007717.1 MGP_LPJ_G0006310.1 mouse_genomes_project 3 134995985 134997901 + Gm43522 lincRNA lincRNA MGP_LPJ_T0063781.1 MGP_LPJ_G0027835.1 mouse_genomes_project 3 139918897 140031793 - MGP_LPJ_P0063781 Nfkb1 protein_coding protein_coding MGP_LPJ_T0063782.1 MGP_LPJ_G0027835.1 mouse_genomes_project 3 139918899 139943531 - MGP_LPJ_P0063782 Nfkb1 protein_coding protein_coding MGP_LPJ_T0063783.1 MGP_LPJ_G0027835.1 mouse_genomes_project 3 139918987 139939064 - MGP_LPJ_P0063783 Nfkb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0063784.1 MGP_LPJ_G0027835.1 mouse_genomes_project 3 139919124 139943744 - Nfkb1 protein_coding retained_intron MGP_LPJ_T0063785.1 MGP_LPJ_G0027835.1 mouse_genomes_project 3 139919521 140005364 - MGP_LPJ_P0063785 Nfkb1 protein_coding protein_coding MGP_LPJ_T0063786.1 MGP_LPJ_G0027835.1 mouse_genomes_project 3 139919524 140006904 - MGP_LPJ_P0063786 Nfkb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0063787.1 MGP_LPJ_G0027835.1 mouse_genomes_project 3 139925047 139928712 - Nfkb1 protein_coding processed_transcript MGP_LPJ_T0063788.1 MGP_LPJ_G0027835.1 mouse_genomes_project 3 139937126 139939127 - Nfkb1 protein_coding retained_intron MGP_LPJ_T0063789.1 MGP_LPJ_G0027835.1 mouse_genomes_project 3 139945856 140031794 - Nfkb1 protein_coding retained_intron MGP_LPJ_T0063790.1 MGP_LPJ_G0027835.1 mouse_genomes_project 3 139954062 139958197 - Nfkb1 protein_coding retained_intron MGP_LPJ_T0004435.1 MGP_LPJ_G0003869.1 mouse_genomes_project 3 163411854 163413727 + 1810013D15Rik antisense antisense MGP_LPJ_T0004436.1 MGP_LPJ_G0003869.1 mouse_genomes_project 3 163411856 163413459 + 1810013D15Rik antisense antisense MGP_LPJ_T0004437.1 MGP_LPJ_G0003869.1 mouse_genomes_project 3 163412341 163427497 + 1810013D15Rik antisense antisense MGP_LPJ_T0001268.1 MGP_LPJ_G0001188.1 mouse_genomes_project 3 66023279 66025288 + TEC TEC MGP_LPJ_T0013889.1 MGP_LPJ_G0011980.1 mouse_genomes_project 3 11032170 11032571 + processed_pseudogene processed_pseudogene MGP_LPJ_T0062036.1 MGP_LPJ_G0027468.1 mouse_genomes_project 3 95133350 95139418 + MGP_LPJ_P0062036 Rptn protein_coding protein_coding MGP_LPJ_T0013853.1 MGP_LPJ_G0011944.1 mouse_genomes_project 3 1948273 1949462 + processed_pseudogene processed_pseudogene MGP_LPJ_T0060922.1 MGP_LPJ_G0027202.1 mouse_genomes_project 3 63872034 63924434 + MGP_LPJ_P0060922 Gmps protein_coding protein_coding MGP_LPJ_T0060532.1 MGP_LPJ_G0027123.1 mouse_genomes_project 3 39812016 39830362 - MGP_LPJ_P0060532 Pgrmc2 protein_coding protein_coding MGP_LPJ_T0060533.1 MGP_LPJ_G0027123.1 mouse_genomes_project 3 39814210 39816361 - Pgrmc2 protein_coding retained_intron MGP_LPJ_T0014328.1 MGP_LPJ_G0012419.1 mouse_genomes_project 3 153651450 153651965 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004279.1 MGP_LPJ_G0003764.1 mouse_genomes_project 3 79861201 79905892 + 4921511C10Rik antisense antisense MGP_LPJ_T0061002.1 MGP_LPJ_G0027223.1 mouse_genomes_project 3 68845092 68852996 + MGP_LPJ_P0061002 Il12a protein_coding protein_coding MGP_LPJ_T0061003.1 MGP_LPJ_G0027223.1 mouse_genomes_project 3 68845872 68852992 + MGP_LPJ_P0061003 Il12a protein_coding protein_coding MGP_LPJ_T0061004.1 MGP_LPJ_G0027223.1 mouse_genomes_project 3 68845975 68852540 + Il12a protein_coding retained_intron MGP_LPJ_T0061005.1 MGP_LPJ_G0027223.1 mouse_genomes_project 3 68848441 68852472 + Il12a protein_coding retained_intron MGP_LPJ_T0061006.1 MGP_LPJ_G0027223.1 mouse_genomes_project 3 68848469 68852994 + Il12a protein_coding retained_intron MGP_LPJ_T0061007.1 MGP_LPJ_G0027223.1 mouse_genomes_project 3 68848469 68852996 + Il12a protein_coding retained_intron MGP_LPJ_T0014331.1 MGP_LPJ_G0012422.1 mouse_genomes_project 3 157166838 157167545 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101315.1 MGP_LPJ_G0039534.1 mouse_genomes_project 3 12266657 12266937 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0062608.1 MGP_LPJ_G0027597.1 mouse_genomes_project 3 103439641 103471479 - MGP_LPJ_P0062608 Ttf2 protein_coding protein_coding MGP_LPJ_T0062609.1 MGP_LPJ_G0027597.1 mouse_genomes_project 3 103442636 103447135 - Ttf2 protein_coding retained_intron MGP_LPJ_T0062610.1 MGP_LPJ_G0027597.1 mouse_genomes_project 3 103447127 103471479 - Ttf2 protein_coding retained_intron MGP_LPJ_T0062611.1 MGP_LPJ_G0027597.1 mouse_genomes_project 3 103448240 103454097 - MGP_LPJ_P0062611 Ttf2 protein_coding protein_coding MGP_LPJ_T0062612.1 MGP_LPJ_G0027597.1 mouse_genomes_project 3 103460248 103461484 - Ttf2 protein_coding retained_intron MGP_LPJ_T0060714.1 MGP_LPJ_G0027154.1 mouse_genomes_project 3 54161708 54221506 + MGP_LPJ_P0060714 Smad9 protein_coding protein_coding MGP_LPJ_T0098564.1 MGP_LPJ_G0036838.1 mouse_genomes_project 3 106501012 106502273 + Gm15472 sense_intronic sense_intronic MGP_LPJ_T0017966.1 MGP_LPJ_G0015444.1 mouse_genomes_project 3 153109051 153122812 + Gm43574 processed_transcript processed_transcript MGP_LPJ_T0061709.1 MGP_LPJ_G0027367.1 mouse_genomes_project 3 90620205 90627205 - MGP_LPJ_P0061709 Efna4 protein_coding protein_coding MGP_LPJ_T0098581.1 MGP_LPJ_G0036855.1 mouse_genomes_project 3 107530600 107542639 - sense_intronic sense_intronic MGP_LPJ_T0100696.1 MGP_LPJ_G0038959.1 mouse_genomes_project 3 101546475 101546604 - Gm22341 snoRNA snoRNA MGP_LPJ_T0099387.1 MGP_LPJ_G0037650.1 mouse_genomes_project 3 48890064 48890171 + Gm23096 snRNA snRNA MGP_LPJ_T0001411.1 MGP_LPJ_G0001330.1 mouse_genomes_project 3 157614567 157616346 + TEC TEC MGP_LPJ_T0007453.1 MGP_LPJ_G0006116.1 mouse_genomes_project 3 2045580 2046844 + 1110015O18Rik lincRNA lincRNA MGP_LPJ_T0007454.1 MGP_LPJ_G0006116.1 mouse_genomes_project 3 2046730 2063459 + 1110015O18Rik lincRNA lincRNA MGP_LPJ_T0007455.1 MGP_LPJ_G0006116.1 mouse_genomes_project 3 2047515 2062523 + 1110015O18Rik lincRNA lincRNA MGP_LPJ_T0100681.1 MGP_LPJ_G0038944.1 mouse_genomes_project 3 82673540 82673680 + Gm22531 snoRNA snoRNA MGP_LPJ_T0061082.1 MGP_LPJ_G0027244.1 mouse_genomes_project 3 76362104 76449161 - MGP_LPJ_P0061082 Golim4 protein_coding protein_coding MGP_LPJ_T0061083.1 MGP_LPJ_G0027244.1 mouse_genomes_project 3 76363203 76449181 - MGP_LPJ_P0061083 Golim4 protein_coding protein_coding MGP_LPJ_T0061084.1 MGP_LPJ_G0027244.1 mouse_genomes_project 3 76363499 76366029 - Golim4 protein_coding retained_intron MGP_LPJ_T0061085.1 MGP_LPJ_G0027244.1 mouse_genomes_project 3 76364679 76449169 - MGP_LPJ_P0061085 Golim4 protein_coding protein_coding MGP_LPJ_T0061086.1 MGP_LPJ_G0027244.1 mouse_genomes_project 3 76376703 76384049 - Golim4 protein_coding retained_intron MGP_LPJ_T0061087.1 MGP_LPJ_G0027244.1 mouse_genomes_project 3 76387041 76394638 - MGP_LPJ_P0061087 Golim4 protein_coding protein_coding MGP_LPJ_T0061088.1 MGP_LPJ_G0027244.1 mouse_genomes_project 3 76391419 76449140 - Golim4 protein_coding retained_intron MGP_LPJ_T0061089.1 MGP_LPJ_G0027244.1 mouse_genomes_project 3 76402035 76448882 - Golim4 protein_coding retained_intron MGP_LPJ_T0061090.1 MGP_LPJ_G0027244.1 mouse_genomes_project 3 76447347 76449163 - Golim4 protein_coding retained_intron MGP_LPJ_T0062976.1 MGP_LPJ_G0027681.1 mouse_genomes_project 3 110669287 110688707 - MGP_LPJ_P0062976 Csf1 protein_coding protein_coding MGP_LPJ_T0062977.1 MGP_LPJ_G0027681.1 mouse_genomes_project 3 110669287 110688474 - MGP_LPJ_P0062977 Csf1 protein_coding protein_coding MGP_LPJ_T0062978.1 MGP_LPJ_G0027681.1 mouse_genomes_project 3 110671253 110679219 - MGP_LPJ_P0062978 Csf1 protein_coding protein_coding MGP_LPJ_T0062979.1 MGP_LPJ_G0027681.1 mouse_genomes_project 3 110673834 110688480 - MGP_LPJ_P0062979 Csf1 protein_coding protein_coding MGP_LPJ_T0062980.1 MGP_LPJ_G0027681.1 mouse_genomes_project 3 110675972 110688480 - Csf1 protein_coding retained_intron MGP_LPJ_T0062981.1 MGP_LPJ_G0027681.1 mouse_genomes_project 3 110676781 110678981 - MGP_LPJ_P0062981 Csf1 protein_coding protein_coding MGP_LPJ_T0062982.1 MGP_LPJ_G0027681.1 mouse_genomes_project 3 110678619 110688459 - MGP_LPJ_P0062982 Csf1 protein_coding protein_coding MGP_LPJ_T0060357.1 MGP_LPJ_G0027092.1 mouse_genomes_project 3 34539647 34593956 - MGP_LPJ_P0060357 Ccdc144b protein_coding protein_coding MGP_LPJ_T0060358.1 MGP_LPJ_G0027092.1 mouse_genomes_project 3 34544168 34593941 - MGP_LPJ_P0060358 Ccdc144b protein_coding protein_coding MGP_LPJ_T0060359.1 MGP_LPJ_G0027092.1 mouse_genomes_project 3 34547851 34593941 - MGP_LPJ_P0060359 Ccdc144b protein_coding nonsense_mediated_decay MGP_LPJ_T0014103.1 MGP_LPJ_G0012194.1 mouse_genomes_project 3 83470157 83470737 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013876.1 MGP_LPJ_G0011967.1 mouse_genomes_project 3 7435892 7436706 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004416.1 MGP_LPJ_G0003853.1 mouse_genomes_project 3 146265891 146285617 - Gm15689 antisense antisense MGP_LPJ_T0062779.1 MGP_LPJ_G0027630.1 mouse_genomes_project 3 106609336 106648316 + MGP_LPJ_P0062779 Phtf1 protein_coding protein_coding MGP_LPJ_T0062780.1 MGP_LPJ_G0027630.1 mouse_genomes_project 3 106609484 106648316 + MGP_LPJ_P0062780 Phtf1 protein_coding protein_coding MGP_LPJ_T0062781.1 MGP_LPJ_G0027630.1 mouse_genomes_project 3 106609592 106665680 + MGP_LPJ_P0062781 Phtf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0062782.1 MGP_LPJ_G0027630.1 mouse_genomes_project 3 106609594 106648318 + MGP_LPJ_P0062782 Phtf1 protein_coding protein_coding MGP_LPJ_T0062783.1 MGP_LPJ_G0027630.1 mouse_genomes_project 3 106609598 106648316 + Phtf1 protein_coding retained_intron MGP_LPJ_T0062784.1 MGP_LPJ_G0027630.1 mouse_genomes_project 3 106609600 106631947 + MGP_LPJ_P0062784 Phtf1 protein_coding protein_coding MGP_LPJ_T0062785.1 MGP_LPJ_G0027630.1 mouse_genomes_project 3 106609672 106648318 + MGP_LPJ_P0062785 Phtf1 protein_coding protein_coding MGP_LPJ_T0062786.1 MGP_LPJ_G0027630.1 mouse_genomes_project 3 106609814 106628383 + MGP_LPJ_P0062786 Phtf1 protein_coding protein_coding MGP_LPJ_T0062787.1 MGP_LPJ_G0027630.1 mouse_genomes_project 3 106610151 106638349 + MGP_LPJ_P0062787 Phtf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0062788.1 MGP_LPJ_G0027630.1 mouse_genomes_project 3 106637247 106638393 + Phtf1 protein_coding retained_intron MGP_LPJ_T0011550.1 MGP_LPJ_G0009668.1 mouse_genomes_project 3 33099682 33099954 + Mir1897 misc_RNA misc_RNA MGP_LPJ_T0099450.1 MGP_LPJ_G0037713.1 mouse_genomes_project 3 142781116 142781275 + Gm23467 snRNA snRNA MGP_LPJ_T0007511.1 MGP_LPJ_G0006157.1 mouse_genomes_project 3 33057805 33061535 - Gm43207 lincRNA lincRNA MGP_LPJ_T0014129.1 MGP_LPJ_G0012220.1 mouse_genomes_project 3 93982761 93982898 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001365.1 MGP_LPJ_G0001285.1 mouse_genomes_project 3 131415226 131418869 - TEC TEC MGP_LPJ_T0013962.1 MGP_LPJ_G0012053.1 mouse_genomes_project 3 36903999 36904342 + processed_pseudogene processed_pseudogene MGP_LPJ_T0060817.1 MGP_LPJ_G0027178.1 mouse_genomes_project 3 58466584 58509249 - MGP_LPJ_P0060817 Clrn1 protein_coding protein_coding MGP_LPJ_T0060818.1 MGP_LPJ_G0027178.1 mouse_genomes_project 3 58467771 58509249 - MGP_LPJ_P0060818 Clrn1 protein_coding protein_coding MGP_LPJ_T0060819.1 MGP_LPJ_G0027178.1 mouse_genomes_project 3 58468537 58509377 - MGP_LPJ_P0060819 Clrn1 protein_coding protein_coding MGP_LPJ_T0061982.1 MGP_LPJ_G0027425.1 mouse_genomes_project 3 94000964 94002698 + MGP_LPJ_P0061982 Sprr2d protein_coding protein_coding MGP_LPJ_T0064344.1 MGP_LPJ_G0027939.1 mouse_genomes_project 3 163380265 163411663 - MGP_LPJ_P0064344 Cth protein_coding protein_coding MGP_LPJ_T0064345.1 MGP_LPJ_G0027939.1 mouse_genomes_project 3 163380440 163383724 - Cth protein_coding processed_transcript MGP_LPJ_T0064346.1 MGP_LPJ_G0027939.1 mouse_genomes_project 3 163383313 163391552 - Cth protein_coding retained_intron MGP_LPJ_T0064347.1 MGP_LPJ_G0027939.1 mouse_genomes_project 3 163405080 163411637 - Cth protein_coding retained_intron MGP_LPJ_T0102077.1 MGP_LPJ_G0040114.1 mouse_genomes_project 3 624099 624527 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0064328.1 MGP_LPJ_G0027936.1 mouse_genomes_project 3 161985740 162783413 + MGP_LPJ_P0064328 Negr1 protein_coding protein_coding MGP_LPJ_T0064329.1 MGP_LPJ_G0027936.1 mouse_genomes_project 3 161985905 162633629 + MGP_LPJ_P0064329 Negr1 protein_coding protein_coding MGP_LPJ_T0064330.1 MGP_LPJ_G0027936.1 mouse_genomes_project 3 161985915 162662041 + MGP_LPJ_P0064330 Negr1 protein_coding protein_coding MGP_LPJ_T0064331.1 MGP_LPJ_G0027936.1 mouse_genomes_project 3 161986092 161994555 + Negr1 protein_coding retained_intron MGP_LPJ_T0064332.1 MGP_LPJ_G0027936.1 mouse_genomes_project 3 161986096 162467664 + MGP_LPJ_P0064332 Negr1 protein_coding protein_coding MGP_LPJ_T0099429.1 MGP_LPJ_G0037692.1 mouse_genomes_project 3 99334515 99334625 - Gm24435 snRNA snRNA MGP_LPJ_T0014166.1 MGP_LPJ_G0012257.1 mouse_genomes_project 3 102002859 102003514 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001334.1 MGP_LPJ_G0001254.1 mouse_genomes_project 3 125455572 125457380 - TEC TEC MGP_LPJ_T0004224.1 MGP_LPJ_G0003723.1 mouse_genomes_project 3 26790023 26867618 - antisense antisense MGP_LPJ_T0004225.1 MGP_LPJ_G0003723.1 mouse_genomes_project 3 26826596 26830043 - antisense antisense MGP_LPJ_T0098591.1 MGP_LPJ_G0036865.1 mouse_genomes_project 3 133347762 133349235 + Gm27195 sense_intronic sense_intronic MGP_LPJ_T0014094.1 MGP_LPJ_G0012185.1 mouse_genomes_project 3 78757972 78758907 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098592.1 MGP_LPJ_G0036866.1 mouse_genomes_project 3 148897508 148899594 - Gm43445 sense_intronic sense_intronic MGP_LPJ_T0059959.1 MGP_LPJ_G0027013.1 mouse_genomes_project 3 12350489 12371834 + MGP_LPJ_P0059959 Car13 protein_coding protein_coding MGP_LPJ_T0062526.1 MGP_LPJ_G0027572.1 mouse_genomes_project 3 99905622 100118928 - MGP_LPJ_P0062526 Pde4dip protein_coding protein_coding MGP_LPJ_T0062527.1 MGP_LPJ_G0027572.1 mouse_genomes_project 3 99905628 99910826 - Pde4dip protein_coding processed_transcript MGP_LPJ_T0062528.1 MGP_LPJ_G0027572.1 mouse_genomes_project 3 99905663 100118928 - MGP_LPJ_P0062528 Pde4dip protein_coding protein_coding MGP_LPJ_T0062529.1 MGP_LPJ_G0027572.1 mouse_genomes_project 3 99910783 99913070 - Pde4dip protein_coding processed_transcript MGP_LPJ_T0062530.1 MGP_LPJ_G0027572.1 mouse_genomes_project 3 99959528 99988753 - MGP_LPJ_P0062530 Pde4dip protein_coding protein_coding MGP_LPJ_T0062531.1 MGP_LPJ_G0027572.1 mouse_genomes_project 3 99961491 99988675 - MGP_LPJ_P0062531 Pde4dip protein_coding nonsense_mediated_decay MGP_LPJ_T0062532.1 MGP_LPJ_G0027572.1 mouse_genomes_project 3 99967391 100093998 - MGP_LPJ_P0062532 Pde4dip protein_coding protein_coding MGP_LPJ_T0062533.1 MGP_LPJ_G0027572.1 mouse_genomes_project 3 100016227 100052231 - MGP_LPJ_P0062533 Pde4dip protein_coding protein_coding MGP_LPJ_T0062534.1 MGP_LPJ_G0027572.1 mouse_genomes_project 3 100047396 100093947 - Pde4dip protein_coding retained_intron MGP_LPJ_T0062221.1 MGP_LPJ_G0027504.1 mouse_genomes_project 3 97230381 97239913 - MGP_LPJ_P0062221 Mllt11 protein_coding protein_coding MGP_LPJ_T0062222.1 MGP_LPJ_G0027504.1 mouse_genomes_project 3 97231275 97245230 - MGP_LPJ_P0062222 Mllt11 protein_coding protein_coding MGP_LPJ_T0062223.1 MGP_LPJ_G0027504.1 mouse_genomes_project 3 97231285 97245233 - MGP_LPJ_P0062223 Mllt11 protein_coding protein_coding MGP_LPJ_T0062224.1 MGP_LPJ_G0027504.1 mouse_genomes_project 3 97239321 97243470 - Mllt11 protein_coding processed_transcript MGP_LPJ_T0007633.1 MGP_LPJ_G0006242.1 mouse_genomes_project 3 93758101 93760382 + Gm43736 lincRNA lincRNA MGP_LPJ_T0099375.1 MGP_LPJ_G0037638.1 mouse_genomes_project 3 14599851 14599915 - Gm26485 snRNA snRNA MGP_LPJ_T0007746.1 MGP_LPJ_G0006337.1 mouse_genomes_project 3 145547830 145549199 + 4930590L14Rik lincRNA lincRNA MGP_LPJ_T0060285.1 MGP_LPJ_G0027083.1 mouse_genomes_project 3 31348421 31488329 - MGP_LPJ_P0060285 Pex5l protein_coding protein_coding MGP_LPJ_T0060286.1 MGP_LPJ_G0027083.1 mouse_genomes_project 3 31348421 31487337 - MGP_LPJ_P0060286 Pex5l protein_coding protein_coding MGP_LPJ_T0060287.1 MGP_LPJ_G0027083.1 mouse_genomes_project 3 31348421 31488329 - MGP_LPJ_P0060287 Pex5l protein_coding protein_coding MGP_LPJ_T0060288.1 MGP_LPJ_G0027083.1 mouse_genomes_project 3 31348421 31488329 - MGP_LPJ_P0060288 Pex5l protein_coding protein_coding MGP_LPJ_T0060289.1 MGP_LPJ_G0027083.1 mouse_genomes_project 3 31348421 31488329 - MGP_LPJ_P0060289 Pex5l protein_coding protein_coding MGP_LPJ_T0060290.1 MGP_LPJ_G0027083.1 mouse_genomes_project 3 31348647 31488298 - MGP_LPJ_P0060290 Pex5l protein_coding protein_coding MGP_LPJ_T0060291.1 MGP_LPJ_G0027083.1 mouse_genomes_project 3 31348967 31551707 - MGP_LPJ_P0060291 Pex5l protein_coding protein_coding MGP_LPJ_T0060292.1 MGP_LPJ_G0027083.1 mouse_genomes_project 3 31348967 31488304 - MGP_LPJ_P0060292 Pex5l protein_coding protein_coding MGP_LPJ_T0060293.1 MGP_LPJ_G0027083.1 mouse_genomes_project 3 31349643 31386572 - MGP_LPJ_P0060293 Pex5l protein_coding protein_coding MGP_LPJ_T0060294.1 MGP_LPJ_G0027083.1 mouse_genomes_project 3 31353350 31551872 - Pex5l protein_coding retained_intron MGP_LPJ_T0060295.1 MGP_LPJ_G0027083.1 mouse_genomes_project 3 31539173 31551701 - Pex5l protein_coding processed_transcript MGP_LPJ_T0060296.1 MGP_LPJ_G0027083.1 mouse_genomes_project 3 31548596 31551808 - Pex5l protein_coding retained_intron MGP_LPJ_T0061159.1 MGP_LPJ_G0027259.1 mouse_genomes_project 3 82750641 82770564 - MGP_LPJ_P0061159 Tdo2 protein_coding protein_coding MGP_LPJ_T0061160.1 MGP_LPJ_G0027259.1 mouse_genomes_project 3 82752279 82758140 - Tdo2 protein_coding processed_transcript MGP_LPJ_T0061161.1 MGP_LPJ_G0027259.1 mouse_genomes_project 3 82752346 82770564 - MGP_LPJ_P0061161 Tdo2 protein_coding protein_coding MGP_LPJ_T0061162.1 MGP_LPJ_G0027259.1 mouse_genomes_project 3 82754965 82758092 - Tdo2 protein_coding retained_intron MGP_LPJ_T0063474.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130565822 130667685 + Camk2d protein_coding processed_transcript MGP_LPJ_T0063475.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130566471 130836022 + MGP_LPJ_P0063475 Camk2d protein_coding protein_coding MGP_LPJ_T0063476.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130566480 130836020 + MGP_LPJ_P0063476 Camk2d protein_coding protein_coding MGP_LPJ_T0063477.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130566518 130836024 + MGP_LPJ_P0063477 Camk2d protein_coding protein_coding MGP_LPJ_T0063478.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130566525 130804404 + MGP_LPJ_P0063478 Camk2d protein_coding protein_coding MGP_LPJ_T0063479.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130566527 130837435 + MGP_LPJ_P0063479 Camk2d protein_coding protein_coding MGP_LPJ_T0063480.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130566529 130753924 + Camk2d protein_coding retained_intron MGP_LPJ_T0063481.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130566530 130831571 + Camk2d protein_coding retained_intron MGP_LPJ_T0063482.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130566530 130797301 + MGP_LPJ_P0063482 Camk2d protein_coding nonsense_mediated_decay MGP_LPJ_T0063483.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130566540 130833824 + MGP_LPJ_P0063483 Camk2d protein_coding nonsense_mediated_decay MGP_LPJ_T0063484.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130566555 130834939 + Camk2d protein_coding processed_transcript MGP_LPJ_T0063485.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130566617 130834812 + MGP_LPJ_P0063485 Camk2d protein_coding protein_coding MGP_LPJ_T0063486.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130566726 130837404 + MGP_LPJ_P0063486 Camk2d protein_coding protein_coding MGP_LPJ_T0063487.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130566828 130834331 + MGP_LPJ_P0063487 Camk2d protein_coding protein_coding MGP_LPJ_T0063488.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130566861 130668382 + Camk2d protein_coding retained_intron MGP_LPJ_T0063489.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130566919 130834793 + Camk2d protein_coding retained_intron MGP_LPJ_T0063490.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130566934 130835436 + MGP_LPJ_P0063490 Camk2d protein_coding protein_coding MGP_LPJ_T0063491.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130762961 130770352 + Camk2d protein_coding retained_intron MGP_LPJ_T0063492.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130763537 130796073 + Camk2d protein_coding processed_transcript MGP_LPJ_T0063493.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130769600 130793905 + Camk2d protein_coding retained_intron MGP_LPJ_T0063494.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130780789 130831370 + Camk2d protein_coding retained_intron MGP_LPJ_T0063495.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130783660 130835122 + Camk2d protein_coding retained_intron MGP_LPJ_T0063496.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130787149 130832661 + Camk2d protein_coding retained_intron MGP_LPJ_T0063497.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130787149 130832661 + Camk2d protein_coding retained_intron MGP_LPJ_T0063498.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130788356 130834288 + MGP_LPJ_P0063498 Camk2d protein_coding protein_coding MGP_LPJ_T0063499.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130789941 130792315 + Camk2d protein_coding retained_intron MGP_LPJ_T0063500.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130791277 130834007 + MGP_LPJ_P0063500 Camk2d protein_coding protein_coding MGP_LPJ_T0063501.1 MGP_LPJ_G0027785.1 mouse_genomes_project 3 130792582 130795674 + Camk2d protein_coding retained_intron MGP_LPJ_T0013967.1 MGP_LPJ_G0012058.1 mouse_genomes_project 3 39355764 39356064 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007799.1 MGP_LPJ_G0006377.1 mouse_genomes_project 3 161429111 161434790 - Gm42947 lincRNA lincRNA MGP_LPJ_T0060852.1 MGP_LPJ_G0027189.1 mouse_genomes_project 3 59728078 59742751 + Aadac protein_coding processed_transcript MGP_LPJ_T0060853.1 MGP_LPJ_G0027189.1 mouse_genomes_project 3 59734038 59744407 + MGP_LPJ_P0060853 Aadac protein_coding protein_coding MGP_LPJ_T0060854.1 MGP_LPJ_G0027189.1 mouse_genomes_project 3 59734153 59738314 + Aadac protein_coding retained_intron MGP_LPJ_T0064377.1 MGP_LPJ_G0027942.1 mouse_genomes_project 3 163525707 163557443 + MGP_LPJ_P0064377 Lrrc40 protein_coding protein_coding MGP_LPJ_T0064378.1 MGP_LPJ_G0027942.1 mouse_genomes_project 3 163525745 163556045 + MGP_LPJ_P0064378 Lrrc40 protein_coding nonsense_mediated_decay MGP_LPJ_T0064379.1 MGP_LPJ_G0027942.1 mouse_genomes_project 3 163525747 163556045 + MGP_LPJ_P0064379 Lrrc40 protein_coding nonsense_mediated_decay MGP_LPJ_T0064380.1 MGP_LPJ_G0027942.1 mouse_genomes_project 3 163525767 163540799 + MGP_LPJ_P0064380 Lrrc40 protein_coding nonsense_mediated_decay MGP_LPJ_T0064381.1 MGP_LPJ_G0027942.1 mouse_genomes_project 3 163525795 163540788 + MGP_LPJ_P0064381 Lrrc40 protein_coding nonsense_mediated_decay MGP_LPJ_T0064382.1 MGP_LPJ_G0027942.1 mouse_genomes_project 3 163525905 163540734 + MGP_LPJ_P0064382 Lrrc40 protein_coding nonsense_mediated_decay MGP_LPJ_T0064383.1 MGP_LPJ_G0027942.1 mouse_genomes_project 3 163551238 163555502 + Lrrc40 protein_coding retained_intron MGP_LPJ_T0064384.1 MGP_LPJ_G0027942.1 mouse_genomes_project 3 163551639 163553017 + Lrrc40 protein_coding retained_intron MGP_LPJ_T0098546.1 MGP_LPJ_G0036820.1 mouse_genomes_project 3 102967288 102969985 + Gm42868 sense_intronic sense_intronic MGP_LPJ_T0007657.1 MGP_LPJ_G0006265.1 mouse_genomes_project 3 104831869 104832466 + Gm43241 lincRNA lincRNA MGP_LPJ_T0014278.1 MGP_LPJ_G0012369.1 mouse_genomes_project 3 138673811 138674310 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099391.1 MGP_LPJ_G0037654.1 mouse_genomes_project 3 55005477 55005584 + Gm25404 snRNA snRNA MGP_LPJ_T0064039.1 MGP_LPJ_G0027888.1 mouse_genomes_project 3 150469600 150472609 - MGP_LPJ_P0064039 Cyr61 protein_coding protein_coding MGP_LPJ_T0007478.1 MGP_LPJ_G0006132.1 mouse_genomes_project 3 15583678 15593634 + Mir124-2hg lincRNA lincRNA MGP_LPJ_T0007479.1 MGP_LPJ_G0006132.1 mouse_genomes_project 3 15583714 15593272 + Mir124-2hg lincRNA lincRNA MGP_LPJ_T0007480.1 MGP_LPJ_G0006132.1 mouse_genomes_project 3 15587660 15589143 + Mir124-2hg lincRNA lincRNA MGP_LPJ_T0007481.1 MGP_LPJ_G0006132.1 mouse_genomes_project 3 15587668 15593328 + Mir124-2hg lincRNA lincRNA MGP_LPJ_T0007482.1 MGP_LPJ_G0006132.1 mouse_genomes_project 3 15587685 15593241 + Mir124-2hg lincRNA lincRNA MGP_LPJ_T0007483.1 MGP_LPJ_G0006132.1 mouse_genomes_project 3 15588633 15602454 + Mir124-2hg lincRNA lincRNA MGP_LPJ_T0007484.1 MGP_LPJ_G0006132.1 mouse_genomes_project 3 15589481 15593328 + Mir124-2hg lincRNA lincRNA MGP_LPJ_T0098245.1 MGP_LPJ_G0036526.1 mouse_genomes_project 3 23467016 23467124 + Gm22832 rRNA rRNA MGP_LPJ_T0014125.1 MGP_LPJ_G0012216.1 mouse_genomes_project 3 92121060 92121963 - processed_pseudogene processed_pseudogene MGP_LPJ_T0061928.1 MGP_LPJ_G0027403.1 mouse_genomes_project 3 91877986 91889183 - MGP_LPJ_P0061928 Chtop protein_coding protein_coding MGP_LPJ_T0061929.1 MGP_LPJ_G0027403.1 mouse_genomes_project 3 91877986 91889182 - MGP_LPJ_P0061929 Chtop protein_coding protein_coding MGP_LPJ_T0061930.1 MGP_LPJ_G0027403.1 mouse_genomes_project 3 91877986 91889181 - MGP_LPJ_P0061930 Chtop protein_coding protein_coding MGP_LPJ_T0061931.1 MGP_LPJ_G0027403.1 mouse_genomes_project 3 91877988 91889193 - MGP_LPJ_P0061931 Chtop protein_coding protein_coding MGP_LPJ_T0061932.1 MGP_LPJ_G0027403.1 mouse_genomes_project 3 91877995 91889229 - MGP_LPJ_P0061932 Chtop protein_coding protein_coding MGP_LPJ_T0061933.1 MGP_LPJ_G0027403.1 mouse_genomes_project 3 91878473 91889205 - MGP_LPJ_P0061933 Chtop protein_coding protein_coding MGP_LPJ_T0061934.1 MGP_LPJ_G0027403.1 mouse_genomes_project 3 91878674 91889216 - MGP_LPJ_P0061934 Chtop protein_coding protein_coding MGP_LPJ_T0061935.1 MGP_LPJ_G0027403.1 mouse_genomes_project 3 91881131 91889207 - MGP_LPJ_P0061935 Chtop protein_coding protein_coding MGP_LPJ_T0061936.1 MGP_LPJ_G0027403.1 mouse_genomes_project 3 91882104 91888753 - MGP_LPJ_P0061936 Chtop protein_coding protein_coding MGP_LPJ_T0011553.1 MGP_LPJ_G0009671.1 mouse_genomes_project 3 58626756 58626832 + Gm27793 misc_RNA misc_RNA MGP_LPJ_T0014099.1 MGP_LPJ_G0012190.1 mouse_genomes_project 3 80788962 80790034 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014104.1 MGP_LPJ_G0012195.1 mouse_genomes_project 3 84514190 84515456 + processed_pseudogene processed_pseudogene MGP_LPJ_T0061955.1 MGP_LPJ_G0027409.1 mouse_genomes_project 3 91977589 91978850 + MGP_LPJ_P0061955 S100a2 protein_coding protein_coding MGP_LPJ_T0004331.1 MGP_LPJ_G0003800.1 mouse_genomes_project 3 99232407 99281591 - Gm43734 antisense antisense MGP_LPJ_T0062944.1 MGP_LPJ_G0027672.1 mouse_genomes_project 3 110190009 110211481 + MGP_LPJ_P0062944 Slc16a4 protein_coding protein_coding MGP_LPJ_T0062945.1 MGP_LPJ_G0027672.1 mouse_genomes_project 3 110190073 110201330 + Slc16a4 protein_coding retained_intron MGP_LPJ_T0062946.1 MGP_LPJ_G0027672.1 mouse_genomes_project 3 110190094 110207083 + MGP_LPJ_P0062946 Slc16a4 protein_coding protein_coding MGP_LPJ_T0063745.1 MGP_LPJ_G0027831.1 mouse_genomes_project 3 139661233 139688815 + MGP_LPJ_P0063745 Slc9b1 protein_coding protein_coding MGP_LPJ_T0063746.1 MGP_LPJ_G0027831.1 mouse_genomes_project 3 139661238 139715779 + MGP_LPJ_P0063746 Slc9b1 protein_coding protein_coding MGP_LPJ_T0063747.1 MGP_LPJ_G0027831.1 mouse_genomes_project 3 139661250 139672534 + Slc9b1 protein_coding retained_intron MGP_LPJ_T0063748.1 MGP_LPJ_G0027831.1 mouse_genomes_project 3 139661250 139672773 + Slc9b1 protein_coding retained_intron MGP_LPJ_T0063749.1 MGP_LPJ_G0027831.1 mouse_genomes_project 3 139661262 139710958 + Slc9b1 protein_coding processed_transcript MGP_LPJ_T0063750.1 MGP_LPJ_G0027831.1 mouse_genomes_project 3 139661534 139691456 + Slc9b1 protein_coding retained_intron MGP_LPJ_T0063751.1 MGP_LPJ_G0027831.1 mouse_genomes_project 3 139661973 139715705 + MGP_LPJ_P0063751 Slc9b1 protein_coding unknown_likely_coding MGP_LPJ_T0063752.1 MGP_LPJ_G0027831.1 mouse_genomes_project 3 139689754 139691245 + Slc9b1 protein_coding retained_intron MGP_LPJ_T0063753.1 MGP_LPJ_G0027831.1 mouse_genomes_project 3 139699543 139715776 + MGP_LPJ_P0063753 Slc9b1 protein_coding nonsense_mediated_decay MGP_LPJ_T0063754.1 MGP_LPJ_G0027831.1 mouse_genomes_project 3 139711877 139715776 + Slc9b1 protein_coding processed_transcript MGP_LPJ_T0001203.1 MGP_LPJ_G0001125.1 mouse_genomes_project 3 44168647 44169988 - TEC TEC MGP_LPJ_T0059938.1 MGP_LPJ_G0027008.1 mouse_genomes_project 3 11609498 11848230 + MGP_LPJ_P0059938 Ralyl protein_coding protein_coding MGP_LPJ_T0059939.1 MGP_LPJ_G0027008.1 mouse_genomes_project 3 11609509 11849086 + MGP_LPJ_P0059939 Ralyl protein_coding protein_coding MGP_LPJ_T0059940.1 MGP_LPJ_G0027008.1 mouse_genomes_project 3 11609516 11849393 + MGP_LPJ_P0059940 Ralyl protein_coding protein_coding MGP_LPJ_T0098553.1 MGP_LPJ_G0036827.1 mouse_genomes_project 3 103938103 103939175 + Gm42938 sense_intronic sense_intronic MGP_LPJ_T0060437.1 MGP_LPJ_G0027107.1 mouse_genomes_project 3 35942316 35952180 + MGP_LPJ_P0060437 Bbs12 protein_coding protein_coding MGP_LPJ_T0060438.1 MGP_LPJ_G0027107.1 mouse_genomes_project 3 35942318 35952183 + MGP_LPJ_P0060438 Bbs12 protein_coding protein_coding MGP_LPJ_T0063612.1 MGP_LPJ_G0027803.1 mouse_genomes_project 3 134100041 134112613 + MGP_LPJ_P0063612 Casp6 protein_coding protein_coding MGP_LPJ_T0063613.1 MGP_LPJ_G0027803.1 mouse_genomes_project 3 134100074 134107253 + Casp6 protein_coding processed_transcript MGP_LPJ_T0063614.1 MGP_LPJ_G0027803.1 mouse_genomes_project 3 134100117 134104032 + Casp6 protein_coding retained_intron MGP_LPJ_T0063615.1 MGP_LPJ_G0027803.1 mouse_genomes_project 3 134108970 134112111 + Casp6 protein_coding retained_intron MGP_LPJ_T0060275.1 MGP_LPJ_G0027081.1 mouse_genomes_project 3 31126621 31141240 + MGP_LPJ_P0060275 Ndufb5 protein_coding protein_coding MGP_LPJ_T0060276.1 MGP_LPJ_G0027081.1 mouse_genomes_project 3 31126684 31138575 + MGP_LPJ_P0060276 Ndufb5 protein_coding protein_coding MGP_LPJ_T0060277.1 MGP_LPJ_G0027081.1 mouse_genomes_project 3 31126689 31129869 + Ndufb5 protein_coding retained_intron MGP_LPJ_T0060278.1 MGP_LPJ_G0027081.1 mouse_genomes_project 3 31126719 31140921 + MGP_LPJ_P0060278 Ndufb5 protein_coding nonsense_mediated_decay MGP_LPJ_T0060279.1 MGP_LPJ_G0027081.1 mouse_genomes_project 3 31126720 31138146 + MGP_LPJ_P0060279 Ndufb5 protein_coding nonsense_mediated_decay MGP_LPJ_T0060280.1 MGP_LPJ_G0027081.1 mouse_genomes_project 3 31131261 31140777 + MGP_LPJ_P0060280 Ndufb5 protein_coding protein_coding MGP_LPJ_T0059935.1 MGP_LPJ_G0027007.1 mouse_genomes_project 3 7927722 7949947 - MGP_LPJ_P0059935 Snx16 protein_coding protein_coding MGP_LPJ_T0059936.1 MGP_LPJ_G0027007.1 mouse_genomes_project 3 7928051 7949932 - MGP_LPJ_P0059936 Snx16 protein_coding protein_coding MGP_LPJ_T0059937.1 MGP_LPJ_G0027007.1 mouse_genomes_project 3 7928842 7949945 - MGP_LPJ_P0059937 Snx16 protein_coding protein_coding MGP_LPJ_T0014216.1 MGP_LPJ_G0012307.1 mouse_genomes_project 3 116312867 116315122 + processed_pseudogene processed_pseudogene MGP_LPJ_T0064042.1 MGP_LPJ_G0027890.1 mouse_genomes_project 3 150772967 150775335 + Bcl10 protein_coding retained_intron MGP_LPJ_T0064043.1 MGP_LPJ_G0027890.1 mouse_genomes_project 3 150774425 150784553 + MGP_LPJ_P0064043 Bcl10 protein_coding protein_coding MGP_LPJ_T0064044.1 MGP_LPJ_G0027890.1 mouse_genomes_project 3 150774520 150778095 + Bcl10 protein_coding processed_transcript MGP_LPJ_T0062589.1 MGP_LPJ_G0027592.1 mouse_genomes_project 3 102621022 102670612 + MGP_LPJ_P0062589 Gdap2 protein_coding protein_coding MGP_LPJ_T0062590.1 MGP_LPJ_G0027592.1 mouse_genomes_project 3 102621159 102666098 + MGP_LPJ_P0062590 Gdap2 protein_coding protein_coding MGP_LPJ_T0062591.1 MGP_LPJ_G0027592.1 mouse_genomes_project 3 102621185 102632301 + Gdap2 protein_coding processed_transcript MGP_LPJ_T0062592.1 MGP_LPJ_G0027592.1 mouse_genomes_project 3 102658207 102670286 + MGP_LPJ_P0062592 Gdap2 protein_coding protein_coding MGP_LPJ_T0062593.1 MGP_LPJ_G0027592.1 mouse_genomes_project 3 102664314 102666098 + Gdap2 protein_coding retained_intron MGP_LPJ_T0063432.1 MGP_LPJ_G0027775.1 mouse_genomes_project 3 127100774 127201981 + MGP_LPJ_P0063432 Sec24d protein_coding protein_coding MGP_LPJ_T0063433.1 MGP_LPJ_G0027775.1 mouse_genomes_project 3 127100798 127113129 + Sec24d protein_coding retained_intron MGP_LPJ_T0063434.1 MGP_LPJ_G0027775.1 mouse_genomes_project 3 127100809 127107725 + MGP_LPJ_P0063434 Sec24d protein_coding protein_coding MGP_LPJ_T0063435.1 MGP_LPJ_G0027775.1 mouse_genomes_project 3 127124162 127201976 + Sec24d protein_coding retained_intron MGP_LPJ_T0063436.1 MGP_LPJ_G0027775.1 mouse_genomes_project 3 127169957 127171896 + Sec24d protein_coding retained_intron MGP_LPJ_T0063437.1 MGP_LPJ_G0027775.1 mouse_genomes_project 3 127172412 127186312 + Sec24d protein_coding processed_transcript MGP_LPJ_T0063438.1 MGP_LPJ_G0027775.1 mouse_genomes_project 3 127191184 127192242 + Sec24d protein_coding retained_intron MGP_LPJ_T0063439.1 MGP_LPJ_G0027775.1 mouse_genomes_project 3 127201053 127201976 + Sec24d protein_coding retained_intron MGP_LPJ_T0060726.1 MGP_LPJ_G0027158.1 mouse_genomes_project 3 54551886 54577101 + MGP_LPJ_P0060726 Spg20 protein_coding protein_coding MGP_LPJ_T0060727.1 MGP_LPJ_G0027158.1 mouse_genomes_project 3 54551891 54569105 + Spg20 protein_coding retained_intron MGP_LPJ_T0060728.1 MGP_LPJ_G0027158.1 mouse_genomes_project 3 54551907 54577090 + MGP_LPJ_P0060728 Spg20 protein_coding protein_coding MGP_LPJ_T0060729.1 MGP_LPJ_G0027158.1 mouse_genomes_project 3 54551916 54554031 + Spg20 protein_coding retained_intron MGP_LPJ_T0060730.1 MGP_LPJ_G0027158.1 mouse_genomes_project 3 54551944 54577096 + MGP_LPJ_P0060730 Spg20 protein_coding protein_coding MGP_LPJ_T0060731.1 MGP_LPJ_G0027158.1 mouse_genomes_project 3 54552165 54569473 + MGP_LPJ_P0060731 Spg20 protein_coding protein_coding MGP_LPJ_T0060732.1 MGP_LPJ_G0027158.1 mouse_genomes_project 3 54552374 54557040 + MGP_LPJ_P0060732 Spg20 protein_coding protein_coding MGP_LPJ_T0060733.1 MGP_LPJ_G0027158.1 mouse_genomes_project 3 54555955 54557112 + MGP_LPJ_P0060733 Spg20 protein_coding protein_coding MGP_LPJ_T0001267.1 MGP_LPJ_G0001187.1 mouse_genomes_project 3 65909793 65911354 - TEC TEC MGP_LPJ_T0060613.1 MGP_LPJ_G0027135.1 mouse_genomes_project 3 50639063 50701022 + Naa15 protein_coding processed_transcript MGP_LPJ_T0060614.1 MGP_LPJ_G0027135.1 mouse_genomes_project 3 50639090 50705448 + MGP_LPJ_P0060614 Naa15 protein_coding protein_coding MGP_LPJ_T0060615.1 MGP_LPJ_G0027135.1 mouse_genomes_project 3 50639381 50672315 + MGP_LPJ_P0060615 Naa15 protein_coding protein_coding MGP_LPJ_T0060616.1 MGP_LPJ_G0027135.1 mouse_genomes_project 3 50668536 50673343 + Naa15 protein_coding retained_intron MGP_LPJ_T0060617.1 MGP_LPJ_G0027135.1 mouse_genomes_project 3 50669525 50678006 + MGP_LPJ_P0060617 Naa15 protein_coding protein_coding MGP_LPJ_T0060618.1 MGP_LPJ_G0027135.1 mouse_genomes_project 3 50689203 50692774 + Naa15 protein_coding retained_intron MGP_LPJ_T0060619.1 MGP_LPJ_G0027135.1 mouse_genomes_project 3 50690191 50692510 + Naa15 protein_coding retained_intron MGP_LPJ_T0060620.1 MGP_LPJ_G0027135.1 mouse_genomes_project 3 50698597 50701670 + Naa15 protein_coding retained_intron MGP_LPJ_T0062299.1 MGP_LPJ_G0027519.1 mouse_genomes_project 3 97734691 97739080 + MGP_LPJ_P0062299 Mcl1 protein_coding protein_coding MGP_LPJ_T0062300.1 MGP_LPJ_G0027519.1 mouse_genomes_project 3 97734760 97736727 + MGP_LPJ_P0062300 Mcl1 protein_coding protein_coding MGP_LPJ_T0014070.1 MGP_LPJ_G0012161.1 mouse_genomes_project 3 70282501 70283228 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100656.1 MGP_LPJ_G0038919.1 mouse_genomes_project 3 20295406 20295535 - Gm26354 snoRNA snoRNA MGP_LPJ_T0062412.1 MGP_LPJ_G0027543.1 mouse_genomes_project 3 98420329 98482645 - MGP_LPJ_P0062412 Fcgr1 protein_coding protein_coding MGP_LPJ_T0062413.1 MGP_LPJ_G0027543.1 mouse_genomes_project 3 98421888 98429996 - MGP_LPJ_P0062413 Fcgr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0001213.1 MGP_LPJ_G0001135.1 mouse_genomes_project 3 50070420 50074234 - TEC TEC MGP_LPJ_T0001386.1 MGP_LPJ_G0001305.1 mouse_genomes_project 3 137310616 137312387 - TEC TEC MGP_LPJ_T0007526.1 MGP_LPJ_G0006167.1 mouse_genomes_project 3 36418119 36424419 + Gm42921 lincRNA lincRNA MGP_LPJ_T0007487.1 MGP_LPJ_G0006135.1 mouse_genomes_project 3 17763593 17764670 + 4632415L05Rik lincRNA lincRNA MGP_LPJ_T0007488.1 MGP_LPJ_G0006135.1 mouse_genomes_project 3 17763605 17767534 + 4632415L05Rik lincRNA lincRNA MGP_LPJ_T0062740.1 MGP_LPJ_G0027622.1 mouse_genomes_project 3 106367419 106374438 + MGP_LPJ_P0062740 protein_coding protein_coding MGP_LPJ_T0004369.1 MGP_LPJ_G0003818.1 mouse_genomes_project 3 111242943 111243889 - Gm12523 antisense antisense MGP_LPJ_T0004394.1 MGP_LPJ_G0003839.1 mouse_genomes_project 3 133925598 133930425 + Gm42650 antisense antisense MGP_LPJ_T0064311.1 MGP_LPJ_G0027932.1 mouse_genomes_project 3 160004426 160112549 + MGP_LPJ_P0064311 protein_coding protein_coding MGP_LPJ_T0064312.1 MGP_LPJ_G0027932.1 mouse_genomes_project 3 160054471 160093834 + MGP_LPJ_P0064312 protein_coding protein_coding MGP_LPJ_T0064313.1 MGP_LPJ_G0027932.1 mouse_genomes_project 3 160055228 160058210 + protein_coding processed_transcript MGP_LPJ_T0064314.1 MGP_LPJ_G0027932.1 mouse_genomes_project 3 160109093 160112548 + MGP_LPJ_P0064314 protein_coding protein_coding MGP_LPJ_T0100661.1 MGP_LPJ_G0038924.1 mouse_genomes_project 3 36460644 36460753 - Gm26404 snoRNA snoRNA MGP_LPJ_T0059878.1 MGP_LPJ_G0026989.1 mouse_genomes_project 3 5851182 5907611 + MGP_LPJ_P0059878 Stmn2 protein_coding protein_coding MGP_LPJ_T0059879.1 MGP_LPJ_G0026989.1 mouse_genomes_project 3 5851337 5894792 + Stmn2 protein_coding retained_intron MGP_LPJ_T0059880.1 MGP_LPJ_G0026989.1 mouse_genomes_project 3 5851408 5888499 + Stmn2 protein_coding retained_intron MGP_LPJ_T0059881.1 MGP_LPJ_G0026989.1 mouse_genomes_project 3 5906270 5907580 + Stmn2 protein_coding processed_transcript MGP_LPJ_T0001191.1 MGP_LPJ_G0001113.1 mouse_genomes_project 3 36504359 36505626 + TEC TEC MGP_LPJ_T0014015.1 MGP_LPJ_G0012106.1 mouse_genomes_project 3 57251399 57251876 - processed_pseudogene processed_pseudogene MGP_LPJ_T0063209.1 MGP_LPJ_G0027732.1 mouse_genomes_project 3 119347381 119351268 - Slc30a7 protein_coding processed_transcript MGP_LPJ_T0063210.1 MGP_LPJ_G0027732.1 mouse_genomes_project 3 119347381 119420427 - MGP_LPJ_P0063210 Slc30a7 protein_coding protein_coding MGP_LPJ_T0063211.1 MGP_LPJ_G0027732.1 mouse_genomes_project 3 119396397 119405754 - Slc30a7 protein_coding processed_transcript MGP_LPJ_T0063212.1 MGP_LPJ_G0027732.1 mouse_genomes_project 3 119404756 119406966 - Slc30a7 protein_coding retained_intron MGP_LPJ_T0098565.1 MGP_LPJ_G0036839.1 mouse_genomes_project 3 106502554 106504645 + Gm43065 sense_intronic sense_intronic MGP_LPJ_T0060662.1 MGP_LPJ_G0027146.1 mouse_genomes_project 3 52846249 53000245 - MGP_LPJ_P0060662 Frem2 protein_coding protein_coding MGP_LPJ_T0060663.1 MGP_LPJ_G0027146.1 mouse_genomes_project 3 52848163 52879212 - Frem2 protein_coding processed_transcript MGP_LPJ_T0060664.1 MGP_LPJ_G0027146.1 mouse_genomes_project 3 52848267 52855195 - Frem2 protein_coding retained_intron MGP_LPJ_T0060665.1 MGP_LPJ_G0027146.1 mouse_genomes_project 3 52989265 52995120 - Frem2 protein_coding retained_intron MGP_LPJ_T0098555.1 MGP_LPJ_G0036829.1 mouse_genomes_project 3 104134219 104135540 - Gm42941 sense_intronic sense_intronic MGP_LPJ_T0098573.1 MGP_LPJ_G0036847.1 mouse_genomes_project 3 106812516 106815793 - Gm43259 sense_intronic sense_intronic MGP_LPJ_T0007578.1 MGP_LPJ_G0006204.1 mouse_genomes_project 3 63315524 63333004 + Gm34240 lincRNA lincRNA MGP_LPJ_T0061695.1 MGP_LPJ_G0027364.1 mouse_genomes_project 3 90551363 90553641 - Slc50a1 protein_coding retained_intron MGP_LPJ_T0061696.1 MGP_LPJ_G0027364.1 mouse_genomes_project 3 90551363 90553644 - Slc50a1 protein_coding retained_intron MGP_LPJ_T0061697.1 MGP_LPJ_G0027364.1 mouse_genomes_project 3 90551363 90553613 - MGP_LPJ_P0061697 Slc50a1 protein_coding protein_coding MGP_LPJ_T0061698.1 MGP_LPJ_G0027364.1 mouse_genomes_project 3 90551363 90553688 - MGP_LPJ_P0061698 Slc50a1 protein_coding protein_coding MGP_LPJ_T0061699.1 MGP_LPJ_G0027364.1 mouse_genomes_project 3 90551363 90553597 - MGP_LPJ_P0061699 Slc50a1 protein_coding nonsense_mediated_decay MGP_LPJ_T0061700.1 MGP_LPJ_G0027364.1 mouse_genomes_project 3 90551365 90553643 - Slc50a1 protein_coding retained_intron MGP_LPJ_T0061701.1 MGP_LPJ_G0027364.1 mouse_genomes_project 3 90551365 90553687 - Slc50a1 protein_coding retained_intron MGP_LPJ_T0061702.1 MGP_LPJ_G0027364.1 mouse_genomes_project 3 90552188 90553688 - MGP_LPJ_P0061702 Slc50a1 protein_coding protein_coding MGP_LPJ_T0061703.1 MGP_LPJ_G0027364.1 mouse_genomes_project 3 90552262 90553345 - Slc50a1 protein_coding processed_transcript MGP_LPJ_T0061152.1 MGP_LPJ_G0027257.1 mouse_genomes_project 3 81814784 81996882 + MGP_LPJ_P0061152 Pdgfc protein_coding protein_coding MGP_LPJ_T0061153.1 MGP_LPJ_G0027257.1 mouse_genomes_project 3 81815540 81996876 + MGP_LPJ_P0061153 Pdgfc protein_coding nonsense_mediated_decay MGP_LPJ_T0061154.1 MGP_LPJ_G0027257.1 mouse_genomes_project 3 81815792 81993612 + MGP_LPJ_P0061154 Pdgfc protein_coding nonsense_mediated_decay MGP_LPJ_T0014067.1 MGP_LPJ_G0012158.1 mouse_genomes_project 3 69929213 69929719 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007701.1 MGP_LPJ_G0006298.1 mouse_genomes_project 3 126067083 126079294 + Gm40190 lincRNA lincRNA MGP_LPJ_T0007646.1 MGP_LPJ_G0006254.1 mouse_genomes_project 3 98557207 98557775 + Gm26654 lincRNA lincRNA MGP_LPJ_T0014170.1 MGP_LPJ_G0012261.1 mouse_genomes_project 3 103165535 103165826 + processed_pseudogene processed_pseudogene MGP_LPJ_T0061299.1 MGP_LPJ_G0027295.1 mouse_genomes_project 3 88287935 88300814 - MGP_LPJ_P0061299 Fcrls protein_coding protein_coding MGP_LPJ_T0061300.1 MGP_LPJ_G0027295.1 mouse_genomes_project 3 88296144 88300953 - MGP_LPJ_P0061300 Fcrls protein_coding protein_coding MGP_LPJ_T0001422.1 MGP_LPJ_G0001341.1 mouse_genomes_project 3 162175501 162177175 + TEC TEC MGP_LPJ_T0001393.1 MGP_LPJ_G0001312.1 mouse_genomes_project 3 140218448 140222295 + TEC TEC MGP_LPJ_T0007520.1 MGP_LPJ_G0006162.1 mouse_genomes_project 3 34828008 34830342 - Gm43204 lincRNA lincRNA MGP_LPJ_T0060179.1 MGP_LPJ_G0027060.1 mouse_genomes_project 3 28805102 28830273 - MGP_LPJ_P0060179 Lrrc34 protein_coding protein_coding MGP_LPJ_T0004238.1 MGP_LPJ_G0003733.1 mouse_genomes_project 3 32235281 32235972 + Gm43140 antisense antisense MGP_LPJ_T0011561.1 MGP_LPJ_G0009679.1 mouse_genomes_project 3 103225523 103225785 - Gm23465 misc_RNA misc_RNA MGP_LPJ_T0062882.1 MGP_LPJ_G0027653.1 mouse_genomes_project 3 108788090 108807704 - MGP_LPJ_P0062882 Pifo protein_coding protein_coding MGP_LPJ_T0062883.1 MGP_LPJ_G0027653.1 mouse_genomes_project 3 108788099 108793648 - MGP_LPJ_P0062883 Pifo protein_coding protein_coding MGP_LPJ_T0004327.1 MGP_LPJ_G0003797.1 mouse_genomes_project 3 98719893 98721730 - Gm15441 antisense antisense MGP_LPJ_T0004328.1 MGP_LPJ_G0003797.1 mouse_genomes_project 3 98719916 98730706 - Gm15441 antisense antisense MGP_LPJ_T0007493.1 MGP_LPJ_G0006140.1 mouse_genomes_project 3 19942164 19943895 - Gm43672 lincRNA lincRNA MGP_LPJ_T0001175.1 MGP_LPJ_G0001097.1 mouse_genomes_project 3 32480244 32481318 - TEC TEC MGP_LPJ_T0060624.1 MGP_LPJ_G0027137.1 mouse_genomes_project 3 50747497 50795803 - MGP_LPJ_P0060624 Setd7 protein_coding protein_coding MGP_LPJ_T0060625.1 MGP_LPJ_G0027137.1 mouse_genomes_project 3 50762176 50768783 - Setd7 protein_coding retained_intron MGP_LPJ_T0060626.1 MGP_LPJ_G0027137.1 mouse_genomes_project 3 50767636 50769264 - Setd7 protein_coding retained_intron MGP_LPJ_T0060627.1 MGP_LPJ_G0027137.1 mouse_genomes_project 3 50781725 50784363 - Setd7 protein_coding retained_intron MGP_LPJ_T0062281.1 MGP_LPJ_G0027514.1 mouse_genomes_project 3 97548306 97558172 + MGP_LPJ_P0062281 Ctsk protein_coding protein_coding MGP_LPJ_T0007552.1 MGP_LPJ_G0006185.1 mouse_genomes_project 3 50255796 50273357 - Gm29230 lincRNA lincRNA MGP_LPJ_T0062597.1 MGP_LPJ_G0027594.1 mouse_genomes_project 3 103041160 103170774 - MGP_LPJ_P0062597 Man1a2 protein_coding protein_coding MGP_LPJ_T0062598.1 MGP_LPJ_G0027594.1 mouse_genomes_project 3 103067129 103133811 - Man1a2 protein_coding processed_transcript MGP_LPJ_T0062599.1 MGP_LPJ_G0027594.1 mouse_genomes_project 3 103099055 103169883 - MGP_LPJ_P0062599 Man1a2 protein_coding protein_coding MGP_LPJ_T0062600.1 MGP_LPJ_G0027594.1 mouse_genomes_project 3 103124778 103170396 - MGP_LPJ_P0062600 Man1a2 protein_coding nonsense_mediated_decay MGP_LPJ_T0062601.1 MGP_LPJ_G0027594.1 mouse_genomes_project 3 103137279 103170579 - Man1a2 protein_coding processed_transcript MGP_LPJ_T0062602.1 MGP_LPJ_G0027594.1 mouse_genomes_project 3 103169863 103170730 - Man1a2 protein_coding processed_transcript MGP_LPJ_T0100653.1 MGP_LPJ_G0038916.1 mouse_genomes_project 3 8497923 8498041 - Gm22795 snoRNA snoRNA MGP_LPJ_T0004340.1 MGP_LPJ_G0003806.1 mouse_genomes_project 3 105294324 105311118 - Tspan2os antisense antisense MGP_LPJ_T0014126.1 MGP_LPJ_G0012217.1 mouse_genomes_project 3 92159085 92159917 + processed_pseudogene processed_pseudogene MGP_LPJ_T0060981.1 MGP_LPJ_G0027216.1 mouse_genomes_project 3 67509252 67555664 + MGP_LPJ_P0060981 Gfm1 protein_coding protein_coding MGP_LPJ_T0060982.1 MGP_LPJ_G0027216.1 mouse_genomes_project 3 67509272 67537962 + Gfm1 protein_coding processed_transcript MGP_LPJ_T0060983.1 MGP_LPJ_G0027216.1 mouse_genomes_project 3 67509395 67537131 + MGP_LPJ_P0060983 Gfm1 protein_coding unknown_likely_coding MGP_LPJ_T0060984.1 MGP_LPJ_G0027216.1 mouse_genomes_project 3 67535635 67553939 + Gfm1 protein_coding retained_intron MGP_LPJ_T0014288.1 MGP_LPJ_G0012379.1 mouse_genomes_project 3 139824320 139824558 + processed_pseudogene processed_pseudogene MGP_LPJ_T0061978.1 MGP_LPJ_G0027421.1 mouse_genomes_project 3 93741023 93743895 - MGP_LPJ_P0061978 Lor protein_coding protein_coding MGP_LPJ_T0014303.1 MGP_LPJ_G0012394.1 mouse_genomes_project 3 143043914 143044646 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017876.1 MGP_LPJ_G0015415.1 mouse_genomes_project 3 32530573 32533269 + processed_transcript retained_intron MGP_LPJ_T0017877.1 MGP_LPJ_G0015415.1 mouse_genomes_project 3 32530741 33099723 + processed_transcript sense_overlapping MGP_LPJ_T0017878.1 MGP_LPJ_G0015415.1 mouse_genomes_project 3 32530761 33144841 + processed_transcript sense_overlapping MGP_LPJ_T0017879.1 MGP_LPJ_G0015415.1 mouse_genomes_project 3 32629514 33099798 + processed_transcript sense_overlapping MGP_LPJ_T0017880.1 MGP_LPJ_G0015415.1 mouse_genomes_project 3 32629627 32959192 + processed_transcript sense_overlapping MGP_LPJ_T0017881.1 MGP_LPJ_G0015415.1 mouse_genomes_project 3 33012964 33144665 + processed_transcript sense_overlapping MGP_LPJ_T0017882.1 MGP_LPJ_G0015415.1 mouse_genomes_project 3 33013017 33146804 + processed_transcript sense_overlapping MGP_LPJ_T0017883.1 MGP_LPJ_G0015415.1 mouse_genomes_project 3 33013024 33027190 + processed_transcript sense_overlapping MGP_LPJ_T0017884.1 MGP_LPJ_G0015415.1 mouse_genomes_project 3 33013028 33099761 + processed_transcript sense_overlapping MGP_LPJ_T0017885.1 MGP_LPJ_G0015415.1 mouse_genomes_project 3 33013352 33013419 + processed_transcript misc_RNA MGP_LPJ_T0017886.1 MGP_LPJ_G0015415.1 mouse_genomes_project 3 33049252 33144805 + processed_transcript sense_overlapping MGP_LPJ_T0017887.1 MGP_LPJ_G0015415.1 mouse_genomes_project 3 33098483 33146804 + processed_transcript sense_overlapping MGP_LPJ_T0017888.1 MGP_LPJ_G0015415.1 mouse_genomes_project 3 33099488 33144708 + processed_transcript sense_overlapping MGP_LPJ_T0017889.1 MGP_LPJ_G0015415.1 mouse_genomes_project 3 33099566 33149662 + processed_transcript sense_overlapping MGP_LPJ_T0017890.1 MGP_LPJ_G0015415.1 mouse_genomes_project 3 33099611 33149625 + processed_transcript sense_overlapping MGP_LPJ_T0017891.1 MGP_LPJ_G0015415.1 mouse_genomes_project 3 33099818 33151265 + processed_transcript sense_overlapping MGP_LPJ_T0017892.1 MGP_LPJ_G0015415.1 mouse_genomes_project 3 33118922 33144957 + processed_transcript sense_overlapping MGP_LPJ_T0017893.1 MGP_LPJ_G0015415.1 mouse_genomes_project 3 33129385 33146806 + processed_transcript sense_overlapping MGP_LPJ_T0001258.1 MGP_LPJ_G0001178.1 mouse_genomes_project 3 58111629 58112821 + TEC TEC MGP_LPJ_T0007723.1 MGP_LPJ_G0006316.1 mouse_genomes_project 3 136692099 136694107 - Gm42880 lincRNA lincRNA MGP_LPJ_T0004409.1 MGP_LPJ_G0003849.1 mouse_genomes_project 3 142545888 142556826 + Gm43691 antisense antisense MGP_LPJ_T0059909.1 MGP_LPJ_G0026998.1 mouse_genomes_project 3 7667738 7685208 - MGP_LPJ_P0059909 Gm37389 protein_coding nonsense_mediated_decay MGP_LPJ_T0014025.1 MGP_LPJ_G0012116.1 mouse_genomes_project 3 59105453 59109850 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001303.1 MGP_LPJ_G0001223.1 mouse_genomes_project 3 99452416 99455663 + TEC TEC MGP_LPJ_T0062437.1 MGP_LPJ_G0027553.1 mouse_genomes_project 3 98807196 98824826 + MGP_LPJ_P0062437 Gm42957 protein_coding nonsense_mediated_decay MGP_LPJ_T0010563.1 MGP_LPJ_G0008681.1 mouse_genomes_project 3 112079161 112079275 + Gm44384 miRNA miRNA MGP_LPJ_T0014146.1 MGP_LPJ_G0012237.1 mouse_genomes_project 3 97450109 97450965 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010545.1 MGP_LPJ_G0008663.1 mouse_genomes_project 3 89330887 89330995 - Gm25641 miRNA miRNA MGP_LPJ_T0063048.1 MGP_LPJ_G0027698.1 mouse_genomes_project 3 111216070 111239020 + MGP_LPJ_P0063048 Psma5 protein_coding protein_coding MGP_LPJ_T0063049.1 MGP_LPJ_G0027698.1 mouse_genomes_project 3 111227922 111238942 + MGP_LPJ_P0063049 Psma5 protein_coding nonsense_mediated_decay MGP_LPJ_T0063651.1 MGP_LPJ_G0027811.1 mouse_genomes_project 3 135371506 135493527 + MGP_LPJ_P0063651 Lef1 protein_coding protein_coding MGP_LPJ_T0063652.1 MGP_LPJ_G0027811.1 mouse_genomes_project 3 135371506 135493527 + MGP_LPJ_P0063652 Lef1 protein_coding protein_coding MGP_LPJ_T0063653.1 MGP_LPJ_G0027811.1 mouse_genomes_project 3 135371506 135493527 + MGP_LPJ_P0063653 Lef1 protein_coding protein_coding MGP_LPJ_T0063654.1 MGP_LPJ_G0027811.1 mouse_genomes_project 3 135373832 135378437 + Lef1 protein_coding retained_intron MGP_LPJ_T0063655.1 MGP_LPJ_G0027811.1 mouse_genomes_project 3 135373832 135493527 + MGP_LPJ_P0063655 Lef1 protein_coding protein_coding MGP_LPJ_T0063656.1 MGP_LPJ_G0027811.1 mouse_genomes_project 3 135373841 135455666 + Lef1 protein_coding retained_intron MGP_LPJ_T0063657.1 MGP_LPJ_G0027811.1 mouse_genomes_project 3 135374849 135452328 + Lef1 protein_coding retained_intron MGP_LPJ_T0063658.1 MGP_LPJ_G0027811.1 mouse_genomes_project 3 135374891 135472778 + Lef1 protein_coding processed_transcript MGP_LPJ_T0062004.1 MGP_LPJ_G0027444.1 mouse_genomes_project 3 94356117 94357942 + MGP_LPJ_P0062004 Lce1c protein_coding protein_coding MGP_LPJ_T0059970.1 MGP_LPJ_G0027018.1 mouse_genomes_project 3 13175917 13355143 - MGP_LPJ_P0059970 protein_coding protein_coding MGP_LPJ_T0059974.1 MGP_LPJ_G0027018.1 mouse_genomes_project 3 13310494 13355180 - protein_coding retained_intron MGP_LPJ_T0010521.1 MGP_LPJ_G0008639.1 mouse_genomes_project 3 26482397 26482473 + Mir466q miRNA miRNA MGP_LPJ_T0063280.1 MGP_LPJ_G0027746.1 mouse_genomes_project 3 120317377 120375029 + MGP_LPJ_P0063280 Frrs1 protein_coding protein_coding MGP_LPJ_T0063281.1 MGP_LPJ_G0027746.1 mouse_genomes_project 3 120317480 120362176 + MGP_LPJ_P0063281 Frrs1 protein_coding nonsense_mediated_decay MGP_LPJ_T0063282.1 MGP_LPJ_G0027746.1 mouse_genomes_project 3 120342183 120379630 + MGP_LPJ_P0063282 Frrs1 protein_coding protein_coding MGP_LPJ_T0063283.1 MGP_LPJ_G0027746.1 mouse_genomes_project 3 120362096 120367938 + Frrs1 protein_coding retained_intron MGP_LPJ_T0063284.1 MGP_LPJ_G0027746.1 mouse_genomes_project 3 120362846 120370417 + Frrs1 protein_coding retained_intron MGP_LPJ_T0063285.1 MGP_LPJ_G0027746.1 mouse_genomes_project 3 120367926 120373989 + MGP_LPJ_P0063285 Frrs1 protein_coding protein_coding MGP_LPJ_T0014143.1 MGP_LPJ_G0012234.1 mouse_genomes_project 3 96527518 96527891 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102128.1 MGP_LPJ_G0040165.1 mouse_genomes_project 3 160888245 160891323 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0004318.1 MGP_LPJ_G0003791.1 mouse_genomes_project 3 97964416 97983741 + C920021L13Rik antisense antisense MGP_LPJ_T0004319.1 MGP_LPJ_G0003791.1 mouse_genomes_project 3 97964419 97984878 + C920021L13Rik antisense antisense MGP_LPJ_T0004320.1 MGP_LPJ_G0003791.1 mouse_genomes_project 3 97964425 97969873 + C920021L13Rik antisense antisense MGP_LPJ_T0062417.1 MGP_LPJ_G0027546.1 mouse_genomes_project 3 98721871 98725797 + MGP_LPJ_P0062417 Txnip protein_coding protein_coding MGP_LPJ_T0062418.1 MGP_LPJ_G0027546.1 mouse_genomes_project 3 98721874 98725771 + MGP_LPJ_P0062418 Txnip protein_coding protein_coding MGP_LPJ_T0062419.1 MGP_LPJ_G0027546.1 mouse_genomes_project 3 98723412 98723928 + Txnip protein_coding retained_intron MGP_LPJ_T0062420.1 MGP_LPJ_G0027546.1 mouse_genomes_project 3 98723425 98724119 + Txnip protein_coding processed_transcript MGP_LPJ_T0062421.1 MGP_LPJ_G0027546.1 mouse_genomes_project 3 98723637 98725772 + Txnip protein_coding processed_transcript MGP_LPJ_T0062422.1 MGP_LPJ_G0027546.1 mouse_genomes_project 3 98723968 98724480 + Txnip protein_coding retained_intron MGP_LPJ_T0004309.1 MGP_LPJ_G0003786.1 mouse_genomes_project 3 96927204 96930181 - B230398E01Rik antisense antisense MGP_LPJ_T0063547.1 MGP_LPJ_G0027791.1 mouse_genomes_project 3 131847153 131855722 + MGP_LPJ_P0063547 Tifa protein_coding protein_coding MGP_LPJ_T0063548.1 MGP_LPJ_G0027791.1 mouse_genomes_project 3 131847258 131895717 + Tifa protein_coding processed_transcript MGP_LPJ_T0063549.1 MGP_LPJ_G0027791.1 mouse_genomes_project 3 131847260 131855291 + MGP_LPJ_P0063549 Tifa protein_coding protein_coding MGP_LPJ_T0063550.1 MGP_LPJ_G0027791.1 mouse_genomes_project 3 131848000 131855291 + MGP_LPJ_P0063550 Tifa protein_coding protein_coding MGP_LPJ_T0063551.1 MGP_LPJ_G0027791.1 mouse_genomes_project 3 131848149 131855722 + MGP_LPJ_P0063551 Tifa protein_coding protein_coding MGP_LPJ_T0102127.1 MGP_LPJ_G0040164.1 mouse_genomes_project 3 147294157 147307527 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0100699.1 MGP_LPJ_G0038962.1 mouse_genomes_project 3 106012224 106012326 + Gm25009 snoRNA snoRNA MGP_LPJ_T0060386.1 MGP_LPJ_G0027099.1 mouse_genomes_project 3 35151191 35158426 - MGP_LPJ_P0060386 Ccna2 protein_coding protein_coding MGP_LPJ_T0060387.1 MGP_LPJ_G0027099.1 mouse_genomes_project 3 35151971 35153188 - Ccna2 protein_coding processed_transcript MGP_LPJ_T0060388.1 MGP_LPJ_G0027099.1 mouse_genomes_project 3 35152315 35157827 - MGP_LPJ_P0060388 Ccna2 protein_coding protein_coding MGP_LPJ_T0060389.1 MGP_LPJ_G0027099.1 mouse_genomes_project 3 35152315 35158203 - MGP_LPJ_P0060389 Ccna2 protein_coding nonsense_mediated_decay MGP_LPJ_T0060390.1 MGP_LPJ_G0027099.1 mouse_genomes_project 3 35156722 35158240 - Ccna2 protein_coding retained_intron MGP_LPJ_T0004281.1 MGP_LPJ_G0003766.1 mouse_genomes_project 3 80926389 80929496 - Gm37892 antisense antisense MGP_LPJ_T0063077.1 MGP_LPJ_G0027704.1 mouse_genomes_project 3 111428539 111513829 - MGP_LPJ_P0063077 5330417C22Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0063078.1 MGP_LPJ_G0027704.1 mouse_genomes_project 3 111428645 111524592 - MGP_LPJ_P0063078 5330417C22Rik protein_coding protein_coding MGP_LPJ_T0063079.1 MGP_LPJ_G0027704.1 mouse_genomes_project 3 111428870 111513754 - MGP_LPJ_P0063079 5330417C22Rik protein_coding protein_coding MGP_LPJ_T0063080.1 MGP_LPJ_G0027704.1 mouse_genomes_project 3 111433859 111435274 - 5330417C22Rik protein_coding retained_intron MGP_LPJ_T0063081.1 MGP_LPJ_G0027704.1 mouse_genomes_project 3 111438068 111440350 - 5330417C22Rik protein_coding retained_intron MGP_LPJ_T0063082.1 MGP_LPJ_G0027704.1 mouse_genomes_project 3 111462210 111513765 - 5330417C22Rik protein_coding retained_intron MGP_LPJ_T0101334.1 MGP_LPJ_G0039542.1 mouse_genomes_project 3 128173276 128173706 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0101319.1 MGP_LPJ_G0039536.1 mouse_genomes_project 3 55298750 55299714 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0101320.1 MGP_LPJ_G0039536.1 mouse_genomes_project 3 55298909 55300046 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0064157.1 MGP_LPJ_G0027913.1 mouse_genomes_project 3 157305089 157320095 - Gipc2 protein_coding processed_transcript MGP_LPJ_T0064158.1 MGP_LPJ_G0027913.1 mouse_genomes_project 3 157305395 157386716 - MGP_LPJ_P0064158 Gipc2 protein_coding protein_coding MGP_LPJ_T0064159.1 MGP_LPJ_G0027913.1 mouse_genomes_project 3 157305397 157318680 - Gipc2 protein_coding processed_transcript MGP_LPJ_T0064160.1 MGP_LPJ_G0027913.1 mouse_genomes_project 3 157305438 157318228 - Gipc2 protein_coding processed_transcript MGP_LPJ_T0064161.1 MGP_LPJ_G0027913.1 mouse_genomes_project 3 157305575 157314490 - Gipc2 protein_coding retained_intron MGP_LPJ_T0064162.1 MGP_LPJ_G0027913.1 mouse_genomes_project 3 157305750 157361519 - Gipc2 protein_coding processed_transcript MGP_LPJ_T0064163.1 MGP_LPJ_G0027913.1 mouse_genomes_project 3 157313472 157319979 - Gipc2 protein_coding retained_intron MGP_LPJ_T0064164.1 MGP_LPJ_G0027913.1 mouse_genomes_project 3 157340377 157350120 - Gipc2 protein_coding retained_intron MGP_LPJ_T0064165.1 MGP_LPJ_G0027913.1 mouse_genomes_project 3 157342857 157386236 - Gipc2 protein_coding processed_transcript MGP_LPJ_T0001138.1 MGP_LPJ_G0001061.1 mouse_genomes_project 3 258348 258475 + TEC TEC MGP_LPJ_T0061275.1 MGP_LPJ_G0027289.1 mouse_genomes_project 3 87109487 87114156 - MGP_LPJ_P0061275 Rps3a1 protein_coding protein_coding MGP_LPJ_T0007766.1 MGP_LPJ_G0006354.1 mouse_genomes_project 3 148797028 148833049 - Gm42709 lincRNA lincRNA MGP_LPJ_T0007691.1 MGP_LPJ_G0006293.1 mouse_genomes_project 3 122020185 122021413 + Gm9916 lincRNA lincRNA MGP_LPJ_T0004370.1 MGP_LPJ_G0003819.1 mouse_genomes_project 3 111694949 111698689 + Gm27244 antisense antisense MGP_LPJ_T0013947.1 MGP_LPJ_G0012038.1 mouse_genomes_project 3 34062218 34062654 + processed_pseudogene processed_pseudogene MGP_LPJ_T0064166.1 MGP_LPJ_G0027914.1 mouse_genomes_project 3 157400243 157438662 - Dnajb4 protein_coding processed_transcript MGP_LPJ_T0064167.1 MGP_LPJ_G0027914.1 mouse_genomes_project 3 157405685 157417876 - MGP_LPJ_P0064167 Dnajb4 protein_coding protein_coding MGP_LPJ_T0064168.1 MGP_LPJ_G0027914.1 mouse_genomes_project 3 157405712 157438466 - MGP_LPJ_P0064168 Dnajb4 protein_coding protein_coding MGP_LPJ_T0064169.1 MGP_LPJ_G0027914.1 mouse_genomes_project 3 157406811 157438402 - MGP_LPJ_P0064169 Dnajb4 protein_coding protein_coding MGP_LPJ_T0064170.1 MGP_LPJ_G0027914.1 mouse_genomes_project 3 157417407 157438440 - Dnajb4 protein_coding processed_transcript MGP_LPJ_T0064171.1 MGP_LPJ_G0027914.1 mouse_genomes_project 3 157417593 157438440 - MGP_LPJ_P0064171 Dnajb4 protein_coding protein_coding MGP_LPJ_T0064172.1 MGP_LPJ_G0027914.1 mouse_genomes_project 3 157433774 157438685 - Dnajb4 protein_coding retained_intron MGP_LPJ_T0014072.1 MGP_LPJ_G0012163.1 mouse_genomes_project 3 70642169 70642728 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010566.1 MGP_LPJ_G0008684.1 mouse_genomes_project 3 122019410 122019483 + Mir137 miRNA miRNA MGP_LPJ_T0013965.1 MGP_LPJ_G0012056.1 mouse_genomes_project 3 37955677 37956065 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004259.1 MGP_LPJ_G0003749.1 mouse_genomes_project 3 52433113 52436129 - Gm43803 antisense antisense MGP_LPJ_T0004260.1 MGP_LPJ_G0003749.1 mouse_genomes_project 3 52433130 52434433 - Gm43803 antisense antisense MGP_LPJ_T0063149.1 MGP_LPJ_G0027719.1 mouse_genomes_project 3 112140998 112179143 + MGP_LPJ_P0063149 Slc25a24 protein_coding protein_coding MGP_LPJ_T0063150.1 MGP_LPJ_G0027719.1 mouse_genomes_project 3 112141011 112169222 + MGP_LPJ_P0063150 Slc25a24 protein_coding nonsense_mediated_decay MGP_LPJ_T0064341.1 MGP_LPJ_G0027938.1 mouse_genomes_project 3 163036689 163122229 + MGP_LPJ_P0064341 Ptger3 protein_coding protein_coding MGP_LPJ_T0064342.1 MGP_LPJ_G0027938.1 mouse_genomes_project 3 163036697 163080413 + Ptger3 protein_coding retained_intron MGP_LPJ_T0064343.1 MGP_LPJ_G0027938.1 mouse_genomes_project 3 163036697 163121097 + MGP_LPJ_P0064343 Ptger3 protein_coding protein_coding MGP_LPJ_T0004334.1 MGP_LPJ_G0003802.1 mouse_genomes_project 3 101700000 101706613 - Gm43120 antisense antisense MGP_LPJ_T0098030.1 MGP_LPJ_G0036311.1 mouse_genomes_project 3 90642804 90644074 + pseudogene pseudogene MGP_LPJ_T0013982.1 MGP_LPJ_G0012073.1 mouse_genomes_project 3 45375782 45376501 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013873.1 MGP_LPJ_G0011964.1 mouse_genomes_project 3 6468013 6468458 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007599.1 MGP_LPJ_G0006221.1 mouse_genomes_project 3 80739178 80938109 + A330069K06Rik lincRNA lincRNA MGP_LPJ_T0101549.1 MGP_LPJ_G0039657.1 mouse_genomes_project 3 142779986 142788638 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101550.1 MGP_LPJ_G0039657.1 mouse_genomes_project 3 142782047 142795744 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0101551.1 MGP_LPJ_G0039657.1 mouse_genomes_project 3 142790338 142796816 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0063123.1 MGP_LPJ_G0027713.1 mouse_genomes_project 3 111859713 111897488 - MGP_LPJ_P0063123 Fndc7 protein_coding protein_coding MGP_LPJ_T0063124.1 MGP_LPJ_G0027713.1 mouse_genomes_project 3 111859718 111864651 - Fndc7 protein_coding processed_transcript MGP_LPJ_T0063125.1 MGP_LPJ_G0027713.1 mouse_genomes_project 3 111861358 111897790 - MGP_LPJ_P0063125 Fndc7 protein_coding protein_coding MGP_LPJ_T0063126.1 MGP_LPJ_G0027713.1 mouse_genomes_project 3 111861375 111897597 - MGP_LPJ_P0063126 Fndc7 protein_coding protein_coding MGP_LPJ_T0063127.1 MGP_LPJ_G0027713.1 mouse_genomes_project 3 111862123 111864647 - Fndc7 protein_coding processed_transcript MGP_LPJ_T0063128.1 MGP_LPJ_G0027713.1 mouse_genomes_project 3 111868767 111877755 - Fndc7 protein_coding processed_transcript MGP_LPJ_T0063129.1 MGP_LPJ_G0027713.1 mouse_genomes_project 3 111876496 111888888 - Fndc7 protein_coding retained_intron MGP_LPJ_T0001325.1 MGP_LPJ_G0001245.1 mouse_genomes_project 3 122120916 122123823 + TEC TEC MGP_LPJ_T0001427.1 MGP_LPJ_G0001346.1 mouse_genomes_project 3 163465663 163469013 + TEC TEC MGP_LPJ_T0007748.1 MGP_LPJ_G0006339.1 mouse_genomes_project 3 147666817 147689289 + 4930519L02Rik lincRNA lincRNA MGP_LPJ_T0007724.1 MGP_LPJ_G0006317.1 mouse_genomes_project 3 137104594 137141433 - Gm29811 lincRNA lincRNA MGP_LPJ_T0060102.1 MGP_LPJ_G0027049.1 mouse_genomes_project 3 25413481 25724122 - MGP_LPJ_P0060102 Fndc3b protein_coding protein_coding MGP_LPJ_T0060103.1 MGP_LPJ_G0027049.1 mouse_genomes_project 3 25413481 25724163 - MGP_LPJ_P0060103 Fndc3b protein_coding protein_coding MGP_LPJ_T0060104.1 MGP_LPJ_G0027049.1 mouse_genomes_project 3 25498804 25725031 - Fndc3b protein_coding retained_intron MGP_LPJ_T0060105.1 MGP_LPJ_G0027049.1 mouse_genomes_project 3 25505809 25724963 - MGP_LPJ_P0060105 Fndc3b protein_coding protein_coding MGP_LPJ_T0001150.1 MGP_LPJ_G0001072.1 mouse_genomes_project 3 16971157 16971869 - TEC TEC MGP_LPJ_T0001273.1 MGP_LPJ_G0001193.1 mouse_genomes_project 3 73397197 73399062 - TEC TEC MGP_LPJ_T0004287.1 MGP_LPJ_G0003769.1 mouse_genomes_project 3 84602284 84619930 - Gm26771 antisense antisense MGP_LPJ_T0014198.1 MGP_LPJ_G0012289.1 mouse_genomes_project 3 110928396 110928633 + processed_pseudogene processed_pseudogene MGP_LPJ_T0060371.1 MGP_LPJ_G0027095.1 mouse_genomes_project 3 34729396 34779422 - MGP_LPJ_P0060371 Qrfpr protein_coding protein_coding MGP_LPJ_T0060372.1 MGP_LPJ_G0027095.1 mouse_genomes_project 3 34729398 34779460 - MGP_LPJ_P0060372 Qrfpr protein_coding protein_coding MGP_LPJ_T0060373.1 MGP_LPJ_G0027095.1 mouse_genomes_project 3 34738010 34779327 - Qrfpr protein_coding retained_intron MGP_LPJ_T0062364.1 MGP_LPJ_G0027529.1 mouse_genomes_project 3 97996612 98003657 - MGP_LPJ_P0062364 Car14 protein_coding protein_coding MGP_LPJ_T0062365.1 MGP_LPJ_G0027529.1 mouse_genomes_project 3 97998584 98003651 - MGP_LPJ_P0062365 Car14 protein_coding protein_coding MGP_LPJ_T0062366.1 MGP_LPJ_G0027529.1 mouse_genomes_project 3 98000356 98003650 - Car14 protein_coding retained_intron MGP_LPJ_T0062367.1 MGP_LPJ_G0027529.1 mouse_genomes_project 3 98000737 98002714 - Car14 protein_coding retained_intron MGP_LPJ_T0004427.1 MGP_LPJ_G0003862.1 mouse_genomes_project 3 158168778 158169936 + Gm16213 antisense antisense MGP_LPJ_T0062449.1 MGP_LPJ_G0027556.1 mouse_genomes_project 3 98869534 98879117 + MGP_LPJ_P0062449 Pias3 protein_coding protein_coding MGP_LPJ_T0062450.1 MGP_LPJ_G0027556.1 mouse_genomes_project 3 98869592 98878629 + MGP_LPJ_P0062450 Pias3 protein_coding nonsense_mediated_decay MGP_LPJ_T0062451.1 MGP_LPJ_G0027556.1 mouse_genomes_project 3 98870226 98872851 + MGP_LPJ_P0062451 Pias3 protein_coding protein_coding MGP_LPJ_T0062452.1 MGP_LPJ_G0027556.1 mouse_genomes_project 3 98870233 98879225 + MGP_LPJ_P0062452 Pias3 protein_coding protein_coding MGP_LPJ_T0062453.1 MGP_LPJ_G0027556.1 mouse_genomes_project 3 98870267 98879128 + MGP_LPJ_P0062453 Pias3 protein_coding protein_coding MGP_LPJ_T0062454.1 MGP_LPJ_G0027556.1 mouse_genomes_project 3 98870283 98873142 + Pias3 protein_coding retained_intron MGP_LPJ_T0062455.1 MGP_LPJ_G0027556.1 mouse_genomes_project 3 98870344 98874849 + MGP_LPJ_P0062455 Pias3 protein_coding nonsense_mediated_decay MGP_LPJ_T0062456.1 MGP_LPJ_G0027556.1 mouse_genomes_project 3 98873635 98876975 + Pias3 protein_coding retained_intron MGP_LPJ_T0062457.1 MGP_LPJ_G0027556.1 mouse_genomes_project 3 98874510 98877040 + Pias3 protein_coding retained_intron MGP_LPJ_T0062458.1 MGP_LPJ_G0027556.1 mouse_genomes_project 3 98877319 98878288 + MGP_LPJ_P0062458 Pias3 protein_coding protein_coding MGP_LPJ_T0099404.1 MGP_LPJ_G0037667.1 mouse_genomes_project 3 79844663 79844767 + Gm24150 snRNA snRNA MGP_LPJ_T0014003.1 MGP_LPJ_G0012094.1 mouse_genomes_project 3 51706770 51707011 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001293.1 MGP_LPJ_G0001213.1 mouse_genomes_project 3 91704354 91706911 + TEC TEC MGP_LPJ_T0014257.1 MGP_LPJ_G0012348.1 mouse_genomes_project 3 130401183 130401391 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001162.1 MGP_LPJ_G0001084.1 mouse_genomes_project 3 28428912 28430976 - TEC TEC MGP_LPJ_T0010585.1 MGP_LPJ_G0008703.1 mouse_genomes_project 3 156154233 156154304 - Mir3963 miRNA miRNA MGP_LPJ_T0099431.1 MGP_LPJ_G0037694.1 mouse_genomes_project 3 106068283 106068390 - Gm25199 snRNA snRNA MGP_LPJ_T0001147.1 MGP_LPJ_G0001069.1 mouse_genomes_project 3 10881411 10885105 + TEC TEC MGP_LPJ_T0060281.1 MGP_LPJ_G0027082.1 mouse_genomes_project 3 31210778 31337444 + MGP_LPJ_P0060281 Usp13 protein_coding protein_coding MGP_LPJ_T0060282.1 MGP_LPJ_G0027082.1 mouse_genomes_project 3 31210803 31332578 + MGP_LPJ_P0060282 Usp13 protein_coding protein_coding MGP_LPJ_T0060283.1 MGP_LPJ_G0027082.1 mouse_genomes_project 3 31210943 31314492 + MGP_LPJ_P0060283 Usp13 protein_coding nonsense_mediated_decay MGP_LPJ_T0060284.1 MGP_LPJ_G0027082.1 mouse_genomes_project 3 31314461 31332586 + MGP_LPJ_P0060284 Usp13 protein_coding protein_coding MGP_LPJ_T0065885.1 MGP_LPJ_G0028297.1 mouse_genomes_project 4 71686217 71772224 - MGP_LPJ_P0065885 Tle1 protein_coding protein_coding MGP_LPJ_T0065886.1 MGP_LPJ_G0028297.1 mouse_genomes_project 4 71686880 71772162 - MGP_LPJ_P0065886 Tle1 protein_coding protein_coding MGP_LPJ_T0065887.1 MGP_LPJ_G0028297.1 mouse_genomes_project 4 71686882 71772159 - MGP_LPJ_P0065887 Tle1 protein_coding protein_coding MGP_LPJ_T0065888.1 MGP_LPJ_G0028297.1 mouse_genomes_project 4 71686885 71770395 - Tle1 protein_coding retained_intron MGP_LPJ_T0065889.1 MGP_LPJ_G0028297.1 mouse_genomes_project 4 71687277 71771455 - MGP_LPJ_P0065889 Tle1 protein_coding protein_coding MGP_LPJ_T0065890.1 MGP_LPJ_G0028297.1 mouse_genomes_project 4 71687292 71689820 - Tle1 protein_coding processed_transcript MGP_LPJ_T0065891.1 MGP_LPJ_G0028297.1 mouse_genomes_project 4 71708774 71711505 - MGP_LPJ_P0065891 Tle1 protein_coding protein_coding MGP_LPJ_T0065892.1 MGP_LPJ_G0028297.1 mouse_genomes_project 4 71729078 71772167 - MGP_LPJ_P0065892 Tle1 protein_coding protein_coding MGP_LPJ_T0065893.1 MGP_LPJ_G0028297.1 mouse_genomes_project 4 71729770 71770795 - MGP_LPJ_P0065893 Tle1 protein_coding protein_coding MGP_LPJ_T0065894.1 MGP_LPJ_G0028297.1 mouse_genomes_project 4 71738678 71772198 - Tle1 protein_coding processed_transcript MGP_LPJ_T0066228.1 MGP_LPJ_G0028382.1 mouse_genomes_project 4 98005366 98022412 - E130114P18Rik protein_coding processed_transcript MGP_LPJ_T0066229.1 MGP_LPJ_G0028382.1 mouse_genomes_project 4 98005366 98022388 - E130114P18Rik protein_coding processed_transcript MGP_LPJ_T0066230.1 MGP_LPJ_G0028382.1 mouse_genomes_project 4 98005366 98022428 - E130114P18Rik protein_coding processed_transcript MGP_LPJ_T0066231.1 MGP_LPJ_G0028382.1 mouse_genomes_project 4 98005366 98022399 - MGP_LPJ_P0066231 E130114P18Rik protein_coding protein_coding MGP_LPJ_T0066232.1 MGP_LPJ_G0028382.1 mouse_genomes_project 4 98005366 98223846 - MGP_LPJ_P0066232 E130114P18Rik protein_coding protein_coding MGP_LPJ_T0066233.1 MGP_LPJ_G0028382.1 mouse_genomes_project 4 98005366 98022421 - MGP_LPJ_P0066233 E130114P18Rik protein_coding protein_coding MGP_LPJ_T0066234.1 MGP_LPJ_G0028382.1 mouse_genomes_project 4 98006423 98132216 - MGP_LPJ_P0066234 E130114P18Rik protein_coding protein_coding MGP_LPJ_T0066235.1 MGP_LPJ_G0028382.1 mouse_genomes_project 4 98012328 98022404 - E130114P18Rik protein_coding processed_transcript MGP_LPJ_T0066236.1 MGP_LPJ_G0028382.1 mouse_genomes_project 4 98120734 98223876 - E130114P18Rik protein_coding processed_transcript MGP_LPJ_T0004558.1 MGP_LPJ_G0003961.1 mouse_genomes_project 4 126951311 126953366 - Gm12932 antisense antisense MGP_LPJ_T0014441.1 MGP_LPJ_G0012532.1 mouse_genomes_project 4 29572589 29575659 + processed_pseudogene processed_pseudogene MGP_LPJ_T0065734.1 MGP_LPJ_G0028252.1 mouse_genomes_project 4 58583930 58622785 + MGP_LPJ_P0065734 Hsdl2 protein_coding protein_coding MGP_LPJ_T0065735.1 MGP_LPJ_G0028252.1 mouse_genomes_project 4 58584012 58622784 + MGP_LPJ_P0065735 Hsdl2 protein_coding protein_coding MGP_LPJ_T0065736.1 MGP_LPJ_G0028252.1 mouse_genomes_project 4 58596854 58603995 + MGP_LPJ_P0065736 Hsdl2 protein_coding protein_coding MGP_LPJ_T0068256.1 MGP_LPJ_G0028821.1 mouse_genomes_project 4 136476645 136508229 + MGP_LPJ_P0068256 Aim1l protein_coding unknown_likely_coding MGP_LPJ_T0068257.1 MGP_LPJ_G0028821.1 mouse_genomes_project 4 136481736 136488522 + MGP_LPJ_P0068257 Aim1l protein_coding protein_coding MGP_LPJ_T0068258.1 MGP_LPJ_G0028821.1 mouse_genomes_project 4 136484198 136508326 + MGP_LPJ_P0068258 Aim1l protein_coding protein_coding MGP_LPJ_T0068259.1 MGP_LPJ_G0028821.1 mouse_genomes_project 4 136494648 136498497 + Aim1l protein_coding processed_transcript MGP_LPJ_T0068260.1 MGP_LPJ_G0028821.1 mouse_genomes_project 4 136494729 136503341 + MGP_LPJ_P0068260 Aim1l protein_coding protein_coding MGP_LPJ_T0068261.1 MGP_LPJ_G0028821.1 mouse_genomes_project 4 136498122 136506921 + Aim1l protein_coding retained_intron MGP_LPJ_T0068262.1 MGP_LPJ_G0028821.1 mouse_genomes_project 4 136498122 136508323 + Aim1l protein_coding retained_intron MGP_LPJ_T0068263.1 MGP_LPJ_G0028821.1 mouse_genomes_project 4 136498125 136505335 + Aim1l protein_coding retained_intron MGP_LPJ_T0068264.1 MGP_LPJ_G0028821.1 mouse_genomes_project 4 136498160 136504899 + Aim1l protein_coding retained_intron MGP_LPJ_T0068265.1 MGP_LPJ_G0028821.1 mouse_genomes_project 4 136498246 136498680 + Aim1l protein_coding retained_intron MGP_LPJ_T0068267.1 MGP_LPJ_G0028821.1 mouse_genomes_project 4 136506639 136508208 + Aim1l protein_coding retained_intron MGP_LPJ_T0068268.1 MGP_LPJ_G0028821.1 mouse_genomes_project 4 136506974 136508318 + Aim1l protein_coding processed_transcript MGP_LPJ_T0065934.1 MGP_LPJ_G0028306.1 mouse_genomes_project 4 79861755 79862232 + MGP_LPJ_P0065934 protein_coding protein_coding MGP_LPJ_T0001442.1 MGP_LPJ_G0001361.1 mouse_genomes_project 4 46279946 46385026 - TEC TEC MGP_LPJ_T0064654.1 MGP_LPJ_G0028007.1 mouse_genomes_project 4 16669833 16772213 - MGP_LPJ_P0064654 Wwp1 protein_coding protein_coding MGP_LPJ_T0064655.1 MGP_LPJ_G0028007.1 mouse_genomes_project 4 16671203 16739288 - MGP_LPJ_P0064655 Wwp1 protein_coding protein_coding MGP_LPJ_T0014375.1 MGP_LPJ_G0012466.1 mouse_genomes_project 4 11324773 11325800 + processed_pseudogene processed_pseudogene MGP_LPJ_T0066531.1 MGP_LPJ_G0028446.1 mouse_genomes_project 4 108004526 108051359 - MGP_LPJ_P0066531 Tceanc2 protein_coding protein_coding MGP_LPJ_T0066532.1 MGP_LPJ_G0028446.1 mouse_genomes_project 4 108009649 108051178 - MGP_LPJ_P0066532 Tceanc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0066533.1 MGP_LPJ_G0028446.1 mouse_genomes_project 4 108009704 108051095 - Tceanc2 protein_coding processed_transcript MGP_LPJ_T0066534.1 MGP_LPJ_G0028446.1 mouse_genomes_project 4 108009912 108051915 - MGP_LPJ_P0066534 Tceanc2 protein_coding protein_coding MGP_LPJ_T0066535.1 MGP_LPJ_G0028446.1 mouse_genomes_project 4 108009956 108051094 - MGP_LPJ_P0066535 Tceanc2 protein_coding protein_coding MGP_LPJ_T0066536.1 MGP_LPJ_G0028446.1 mouse_genomes_project 4 108010076 108051928 - MGP_LPJ_P0066536 Tceanc2 protein_coding protein_coding MGP_LPJ_T0066537.1 MGP_LPJ_G0028446.1 mouse_genomes_project 4 108038488 108050663 - Tceanc2 protein_coding processed_transcript MGP_LPJ_T0066538.1 MGP_LPJ_G0028446.1 mouse_genomes_project 4 108045816 108051020 - Tceanc2 protein_coding processed_transcript MGP_LPJ_T0066539.1 MGP_LPJ_G0028446.1 mouse_genomes_project 4 108049427 108050480 - Tceanc2 protein_coding processed_transcript MGP_LPJ_T0067546.1 MGP_LPJ_G0028672.1 mouse_genomes_project 4 126849172 126871799 + MGP_LPJ_P0067546 Rspo1 protein_coding protein_coding MGP_LPJ_T0067547.1 MGP_LPJ_G0028672.1 mouse_genomes_project 4 126870179 126871225 + Rspo1 protein_coding processed_transcript MGP_LPJ_T0067529.1 MGP_LPJ_G0028667.1 mouse_genomes_project 4 126702408 126703659 - protein_coding retained_intron MGP_LPJ_T0067530.1 MGP_LPJ_G0028667.1 mouse_genomes_project 4 126702813 126704138 - MGP_LPJ_P0067530 protein_coding protein_coding MGP_LPJ_T0067531.1 MGP_LPJ_G0028667.1 mouse_genomes_project 4 126702813 126704059 - MGP_LPJ_P0067531 protein_coding protein_coding MGP_LPJ_T0067532.1 MGP_LPJ_G0028667.1 mouse_genomes_project 4 126702814 126703990 - MGP_LPJ_P0067532 protein_coding protein_coding MGP_LPJ_T0067533.1 MGP_LPJ_G0028667.1 mouse_genomes_project 4 126702818 126704536 - MGP_LPJ_P0067533 protein_coding protein_coding MGP_LPJ_T0067534.1 MGP_LPJ_G0028667.1 mouse_genomes_project 4 126702874 126703802 - MGP_LPJ_P0067534 protein_coding protein_coding MGP_LPJ_T0099532.1 MGP_LPJ_G0037795.1 mouse_genomes_project 4 136197491 136197644 - Gm25270 snRNA snRNA MGP_LPJ_T0069348.1 MGP_LPJ_G0029082.1 mouse_genomes_project 4 156344439 156356029 - MGP_LPJ_P0069348 Rnf207 protein_coding protein_coding MGP_LPJ_T0069349.1 MGP_LPJ_G0029082.1 mouse_genomes_project 4 156344731 156346454 - Rnf207 protein_coding retained_intron MGP_LPJ_T0069350.1 MGP_LPJ_G0029082.1 mouse_genomes_project 4 156348804 156355879 - MGP_LPJ_P0069350 Rnf207 protein_coding protein_coding MGP_LPJ_T0069351.1 MGP_LPJ_G0029082.1 mouse_genomes_project 4 156348977 156350824 - Rnf207 protein_coding retained_intron MGP_LPJ_T0069352.1 MGP_LPJ_G0029082.1 mouse_genomes_project 4 156349136 156350769 - Rnf207 protein_coding retained_intron MGP_LPJ_T0069353.1 MGP_LPJ_G0029082.1 mouse_genomes_project 4 156350254 156350821 - Rnf207 protein_coding retained_intron MGP_LPJ_T0069354.1 MGP_LPJ_G0029082.1 mouse_genomes_project 4 156350813 156355902 - MGP_LPJ_P0069354 Rnf207 protein_coding nonsense_mediated_decay MGP_LPJ_T0069355.1 MGP_LPJ_G0029082.1 mouse_genomes_project 4 156350823 156353386 - Rnf207 protein_coding retained_intron MGP_LPJ_T0069356.1 MGP_LPJ_G0029082.1 mouse_genomes_project 4 156351973 156356414 - Rnf207 protein_coding retained_intron MGP_LPJ_T0069357.1 MGP_LPJ_G0029082.1 mouse_genomes_project 4 156351975 156356040 - Rnf207 protein_coding retained_intron MGP_LPJ_T0069358.1 MGP_LPJ_G0029082.1 mouse_genomes_project 4 156352306 156356046 - Rnf207 protein_coding retained_intron MGP_LPJ_T0069359.1 MGP_LPJ_G0029082.1 mouse_genomes_project 4 156352881 156353749 - Rnf207 protein_coding retained_intron MGP_LPJ_T0065670.1 MGP_LPJ_G0028237.1 mouse_genomes_project 4 56910182 56936132 - Txndc8 protein_coding processed_transcript MGP_LPJ_T0065671.1 MGP_LPJ_G0028237.1 mouse_genomes_project 4 56910182 56936231 - MGP_LPJ_P0065671 Txndc8 protein_coding protein_coding MGP_LPJ_T0065672.1 MGP_LPJ_G0028237.1 mouse_genomes_project 4 56910184 56927562 - MGP_LPJ_P0065672 Txndc8 protein_coding protein_coding MGP_LPJ_T0067766.1 MGP_LPJ_G0028725.1 mouse_genomes_project 4 131279113 131288707 - MGP_LPJ_P0067766 Hpca protein_coding protein_coding MGP_LPJ_T0067767.1 MGP_LPJ_G0028725.1 mouse_genomes_project 4 131279114 131291775 - MGP_LPJ_P0067767 Hpca protein_coding protein_coding MGP_LPJ_T0067768.1 MGP_LPJ_G0028725.1 mouse_genomes_project 4 131279120 131291479 - MGP_LPJ_P0067768 Hpca protein_coding protein_coding MGP_LPJ_T0067769.1 MGP_LPJ_G0028725.1 mouse_genomes_project 4 131279120 131291030 - MGP_LPJ_P0067769 Hpca protein_coding protein_coding MGP_LPJ_T0067770.1 MGP_LPJ_G0028725.1 mouse_genomes_project 4 131279796 131290686 - MGP_LPJ_P0067770 Hpca protein_coding protein_coding MGP_LPJ_T0067771.1 MGP_LPJ_G0028725.1 mouse_genomes_project 4 131279810 131291628 - MGP_LPJ_P0067771 Hpca protein_coding protein_coding MGP_LPJ_T0067772.1 MGP_LPJ_G0028725.1 mouse_genomes_project 4 131279985 131291664 - MGP_LPJ_P0067772 Hpca protein_coding protein_coding MGP_LPJ_T0067773.1 MGP_LPJ_G0028725.1 mouse_genomes_project 4 131280229 131291478 - MGP_LPJ_P0067773 Hpca protein_coding protein_coding MGP_LPJ_T0067774.1 MGP_LPJ_G0028725.1 mouse_genomes_project 4 131288344 131291447 - MGP_LPJ_P0067774 Hpca protein_coding protein_coding MGP_LPJ_T0067424.1 MGP_LPJ_G0028636.1 mouse_genomes_project 4 122743662 122752754 - MGP_LPJ_P0067424 Gm12888 protein_coding protein_coding MGP_LPJ_T0068834.1 MGP_LPJ_G0028955.1 mouse_genomes_project 4 144455154 144469867 - MGP_LPJ_P0068834 Clcnka protein_coding protein_coding MGP_LPJ_T0068835.1 MGP_LPJ_G0028955.1 mouse_genomes_project 4 144455154 144470387 - MGP_LPJ_P0068835 Clcnka protein_coding protein_coding MGP_LPJ_T0068836.1 MGP_LPJ_G0028955.1 mouse_genomes_project 4 144463253 144466564 - Clcnka protein_coding retained_intron MGP_LPJ_T0068837.1 MGP_LPJ_G0028955.1 mouse_genomes_project 4 144466856 144470237 - MGP_LPJ_P0068837 Clcnka protein_coding protein_coding MGP_LPJ_T0000001.1 MGP_LPJ_G0000001.1 mouse_genomes_project 4 119023529 119059908 - Gm17114 3prime_overlapping_ncRNA 3prime_overlapping_ncRNA MGP_LPJ_T0007971.1 MGP_LPJ_G0006511.1 mouse_genomes_project 4 129600547 129629311 + A630031M04Rik lincRNA lincRNA MGP_LPJ_T0102141.1 MGP_LPJ_G0040178.1 mouse_genomes_project 4 88917850 88918358 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0001437.1 MGP_LPJ_G0001356.1 mouse_genomes_project 4 13321433 13322039 + TEC TEC MGP_LPJ_T0069702.1 MGP_LPJ_G0029145.1 mouse_genomes_project 4 160299903 160316452 + MGP_LPJ_P0069702 Sdf4 protein_coding protein_coding MGP_LPJ_T0069703.1 MGP_LPJ_G0029145.1 mouse_genomes_project 4 160299942 160319739 + MGP_LPJ_P0069703 Sdf4 protein_coding protein_coding MGP_LPJ_T0069704.1 MGP_LPJ_G0029145.1 mouse_genomes_project 4 160300201 160309111 + MGP_LPJ_P0069704 Sdf4 protein_coding protein_coding MGP_LPJ_T0069705.1 MGP_LPJ_G0029145.1 mouse_genomes_project 4 160300408 160316560 + MGP_LPJ_P0069705 Sdf4 protein_coding protein_coding MGP_LPJ_T0069706.1 MGP_LPJ_G0029145.1 mouse_genomes_project 4 160306473 160308011 + Sdf4 protein_coding retained_intron MGP_LPJ_T0069707.1 MGP_LPJ_G0029145.1 mouse_genomes_project 4 160314750 160316099 + Sdf4 protein_coding retained_intron MGP_LPJ_T0010624.1 MGP_LPJ_G0008742.1 mouse_genomes_project 4 91659394 91659474 - Mir6402 miRNA miRNA MGP_LPJ_T0065609.1 MGP_LPJ_G0028220.1 mouse_genomes_project 4 54143079 54189141 + MGP_LPJ_P0065609 Rad23b protein_coding protein_coding MGP_LPJ_T0065610.1 MGP_LPJ_G0028220.1 mouse_genomes_project 4 54143086 54161773 + Rad23b protein_coding processed_transcript MGP_LPJ_T0065611.1 MGP_LPJ_G0028220.1 mouse_genomes_project 4 54143088 54144221 + Rad23b protein_coding processed_transcript MGP_LPJ_T0065612.1 MGP_LPJ_G0028220.1 mouse_genomes_project 4 54143126 54177942 + Rad23b protein_coding processed_transcript MGP_LPJ_T0014567.1 MGP_LPJ_G0012658.1 mouse_genomes_project 4 76100189 76101136 + processed_pseudogene processed_pseudogene MGP_LPJ_T0066058.1 MGP_LPJ_G0028327.1 mouse_genomes_project 4 86749695 86762379 - Plin2 protein_coding processed_transcript MGP_LPJ_T0066059.1 MGP_LPJ_G0028327.1 mouse_genomes_project 4 86760260 86776816 - MGP_LPJ_P0066059 Plin2 protein_coding protein_coding MGP_LPJ_T0066060.1 MGP_LPJ_G0028327.1 mouse_genomes_project 4 86760602 86762340 - Plin2 protein_coding processed_transcript MGP_LPJ_T0066061.1 MGP_LPJ_G0028327.1 mouse_genomes_project 4 86760851 86762844 - Plin2 protein_coding processed_transcript MGP_LPJ_T0066062.1 MGP_LPJ_G0028327.1 mouse_genomes_project 4 86763816 86772118 - MGP_LPJ_P0066062 Plin2 protein_coding protein_coding MGP_LPJ_T0066063.1 MGP_LPJ_G0028327.1 mouse_genomes_project 4 86767500 86776316 - MGP_LPJ_P0066063 Plin2 protein_coding protein_coding MGP_LPJ_T0066064.1 MGP_LPJ_G0028327.1 mouse_genomes_project 4 86767500 86776524 - MGP_LPJ_P0066064 Plin2 protein_coding protein_coding MGP_LPJ_T0066065.1 MGP_LPJ_G0028327.1 mouse_genomes_project 4 86774420 86776742 - Plin2 protein_coding processed_transcript MGP_LPJ_T0014566.1 MGP_LPJ_G0012657.1 mouse_genomes_project 4 75597120 75598016 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014558.1 MGP_LPJ_G0012649.1 mouse_genomes_project 4 74318906 74319559 + processed_pseudogene processed_pseudogene MGP_LPJ_T0069107.1 MGP_LPJ_G0029037.1 mouse_genomes_project 4 152879059 152880784 - MGP_LPJ_P0069107 Cort protein_coding protein_coding MGP_LPJ_T0018021.1 MGP_LPJ_G0015480.1 mouse_genomes_project 4 107039187 107094450 + Gm12724 processed_transcript processed_transcript MGP_LPJ_T0010650.1 MGP_LPJ_G0008768.1 mouse_genomes_project 4 135555966 135556028 + Mir7017 miRNA miRNA MGP_LPJ_T0064484.1 MGP_LPJ_G0027966.1 mouse_genomes_project 4 5285991 5355823 + Chd7 protein_coding retained_intron MGP_LPJ_T0064485.1 MGP_LPJ_G0027966.1 mouse_genomes_project 4 5286055 5386305 + MGP_LPJ_P0064485 Chd7 protein_coding protein_coding MGP_LPJ_T0064486.1 MGP_LPJ_G0027966.1 mouse_genomes_project 4 5286495 5468464 + MGP_LPJ_P0064486 Chd7 protein_coding protein_coding MGP_LPJ_T0064487.1 MGP_LPJ_G0027966.1 mouse_genomes_project 4 5288181 5469312 + MGP_LPJ_P0064487 Chd7 protein_coding protein_coding MGP_LPJ_T0064488.1 MGP_LPJ_G0027966.1 mouse_genomes_project 4 5307187 5351479 + MGP_LPJ_P0064488 Chd7 protein_coding protein_coding MGP_LPJ_T0064489.1 MGP_LPJ_G0027966.1 mouse_genomes_project 4 5351354 5468878 + MGP_LPJ_P0064489 Chd7 protein_coding protein_coding MGP_LPJ_T0064490.1 MGP_LPJ_G0027966.1 mouse_genomes_project 4 5351421 5468308 + MGP_LPJ_P0064490 Chd7 protein_coding unknown_likely_coding MGP_LPJ_T0064491.1 MGP_LPJ_G0027966.1 mouse_genomes_project 4 5441988 5446376 + Chd7 protein_coding processed_transcript MGP_LPJ_T0102133.1 MGP_LPJ_G0040170.1 mouse_genomes_project 4 47949334 47968097 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0014381.1 MGP_LPJ_G0012472.1 mouse_genomes_project 4 12675415 12676260 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065995.1 MGP_LPJ_G0028318.1 mouse_genomes_project 4 83420763 83454137 - MGP_LPJ_P0065995 Psip1 protein_coding protein_coding MGP_LPJ_T0065996.1 MGP_LPJ_G0028318.1 mouse_genomes_project 4 83423323 83426208 - Psip1 protein_coding retained_intron MGP_LPJ_T0065997.1 MGP_LPJ_G0028318.1 mouse_genomes_project 4 83427785 83431266 - MGP_LPJ_P0065997 Psip1 protein_coding protein_coding MGP_LPJ_T0065998.1 MGP_LPJ_G0028318.1 mouse_genomes_project 4 83427785 83454136 - MGP_LPJ_P0065998 Psip1 protein_coding protein_coding MGP_LPJ_T0065999.1 MGP_LPJ_G0028318.1 mouse_genomes_project 4 83427785 83454131 - MGP_LPJ_P0065999 Psip1 protein_coding protein_coding MGP_LPJ_T0066000.1 MGP_LPJ_G0028318.1 mouse_genomes_project 4 83428747 83431345 - Psip1 protein_coding retained_intron MGP_LPJ_T0066002.1 MGP_LPJ_G0028318.1 mouse_genomes_project 4 83442581 83453862 - MGP_LPJ_P0066002 Psip1 protein_coding protein_coding MGP_LPJ_T0007897.1 MGP_LPJ_G0006457.1 mouse_genomes_project 4 84017789 84020630 - 6030471H07Rik lincRNA lincRNA MGP_LPJ_T0014512.1 MGP_LPJ_G0012603.1 mouse_genomes_project 4 52640909 52641313 + processed_pseudogene processed_pseudogene MGP_LPJ_T0064603.1 MGP_LPJ_G0027988.1 mouse_genomes_project 4 9756703 9824355 + MGP_LPJ_P0064603 Triqk protein_coding protein_coding MGP_LPJ_T0064604.1 MGP_LPJ_G0027988.1 mouse_genomes_project 4 9756723 9826962 + MGP_LPJ_P0064604 Triqk protein_coding protein_coding MGP_LPJ_T0064605.1 MGP_LPJ_G0027988.1 mouse_genomes_project 4 9767832 9824552 + Triqk protein_coding processed_transcript MGP_LPJ_T0066881.1 MGP_LPJ_G0028515.1 mouse_genomes_project 4 116486199 116496132 - MGP_LPJ_P0066881 Cyp4a14 protein_coding protein_coding MGP_LPJ_T0066882.1 MGP_LPJ_G0028515.1 mouse_genomes_project 4 116494063 116496130 - Cyp4a14 protein_coding processed_transcript MGP_LPJ_T0068304.1 MGP_LPJ_G0028829.1 mouse_genomes_project 4 136676002 136677414 + MGP_LPJ_P0068304 E130218I03Rik protein_coding protein_coding MGP_LPJ_T0068305.1 MGP_LPJ_G0028829.1 mouse_genomes_project 4 136676103 136678214 + MGP_LPJ_P0068305 E130218I03Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0068306.1 MGP_LPJ_G0028829.1 mouse_genomes_project 4 136676103 136678210 + MGP_LPJ_P0068306 E130218I03Rik protein_coding protein_coding MGP_LPJ_T0068307.1 MGP_LPJ_G0028829.1 mouse_genomes_project 4 136676116 136677330 + MGP_LPJ_P0068307 E130218I03Rik protein_coding protein_coding MGP_LPJ_T0068308.1 MGP_LPJ_G0028829.1 mouse_genomes_project 4 136676116 136677653 + MGP_LPJ_P0068308 E130218I03Rik protein_coding protein_coding MGP_LPJ_T0068309.1 MGP_LPJ_G0028829.1 mouse_genomes_project 4 136676117 136677893 + MGP_LPJ_P0068309 E130218I03Rik protein_coding protein_coding MGP_LPJ_T0068310.1 MGP_LPJ_G0028829.1 mouse_genomes_project 4 136676118 136677860 + MGP_LPJ_P0068310 E130218I03Rik protein_coding protein_coding MGP_LPJ_T0068311.1 MGP_LPJ_G0028829.1 mouse_genomes_project 4 136676323 136677618 + E130218I03Rik protein_coding processed_transcript MGP_LPJ_T0007812.1 MGP_LPJ_G0006386.1 mouse_genomes_project 4 5914653 5917246 - Gm26548 lincRNA lincRNA MGP_LPJ_T0064440.1 MGP_LPJ_G0027954.1 mouse_genomes_project 4 549183 563357 - MGP_LPJ_P0064440 Sdr16c5 protein_coding protein_coding MGP_LPJ_T0064441.1 MGP_LPJ_G0027954.1 mouse_genomes_project 4 556034 560315 - Sdr16c5 protein_coding processed_transcript MGP_LPJ_T0067852.1 MGP_LPJ_G0028743.1 mouse_genomes_project 4 131819514 131826207 + MGP_LPJ_P0067852 Tmem234 protein_coding nonsense_mediated_decay MGP_LPJ_T0067853.1 MGP_LPJ_G0028743.1 mouse_genomes_project 4 131819514 131826870 + MGP_LPJ_P0067853 Tmem234 protein_coding nonsense_mediated_decay MGP_LPJ_T0067854.1 MGP_LPJ_G0028743.1 mouse_genomes_project 4 131819515 131838131 + MGP_LPJ_P0067854 Tmem234 protein_coding nonsense_mediated_decay MGP_LPJ_T0067855.1 MGP_LPJ_G0028743.1 mouse_genomes_project 4 131819526 131827281 + MGP_LPJ_P0067855 Tmem234 protein_coding protein_coding MGP_LPJ_T0067856.1 MGP_LPJ_G0028743.1 mouse_genomes_project 4 131819527 131826196 + MGP_LPJ_P0067856 Tmem234 protein_coding protein_coding MGP_LPJ_T0067857.1 MGP_LPJ_G0028743.1 mouse_genomes_project 4 131819533 131826386 + MGP_LPJ_P0067857 Tmem234 protein_coding nonsense_mediated_decay MGP_LPJ_T0067858.1 MGP_LPJ_G0028743.1 mouse_genomes_project 4 131819537 131826465 + MGP_LPJ_P0067858 Tmem234 protein_coding nonsense_mediated_decay MGP_LPJ_T0067859.1 MGP_LPJ_G0028743.1 mouse_genomes_project 4 131819537 131842399 + MGP_LPJ_P0067859 Tmem234 protein_coding nonsense_mediated_decay MGP_LPJ_T0067860.1 MGP_LPJ_G0028743.1 mouse_genomes_project 4 131819537 131826231 + MGP_LPJ_P0067860 Tmem234 protein_coding protein_coding MGP_LPJ_T0067861.1 MGP_LPJ_G0028743.1 mouse_genomes_project 4 131819541 131826474 + MGP_LPJ_P0067861 Tmem234 protein_coding nonsense_mediated_decay MGP_LPJ_T0067862.1 MGP_LPJ_G0028743.1 mouse_genomes_project 4 131819546 131827274 + MGP_LPJ_P0067862 Tmem234 protein_coding nonsense_mediated_decay MGP_LPJ_T0067863.1 MGP_LPJ_G0028743.1 mouse_genomes_project 4 131819547 131825811 + MGP_LPJ_P0067863 Tmem234 protein_coding nonsense_mediated_decay MGP_LPJ_T0067864.1 MGP_LPJ_G0028743.1 mouse_genomes_project 4 131819548 131826515 + Tmem234 protein_coding retained_intron MGP_LPJ_T0067865.1 MGP_LPJ_G0028743.1 mouse_genomes_project 4 131819549 131825828 + MGP_LPJ_P0067865 Tmem234 protein_coding nonsense_mediated_decay MGP_LPJ_T0067866.1 MGP_LPJ_G0028743.1 mouse_genomes_project 4 131819550 131821546 + Tmem234 protein_coding processed_transcript MGP_LPJ_T0067867.1 MGP_LPJ_G0028743.1 mouse_genomes_project 4 131819553 131820296 + MGP_LPJ_P0067867 Tmem234 protein_coding nonsense_mediated_decay MGP_LPJ_T0067868.1 MGP_LPJ_G0028743.1 mouse_genomes_project 4 131819829 131820777 + MGP_LPJ_P0067868 Tmem234 protein_coding nonsense_mediated_decay MGP_LPJ_T0067869.1 MGP_LPJ_G0028743.1 mouse_genomes_project 4 131819829 131826342 + MGP_LPJ_P0067869 Tmem234 protein_coding nonsense_mediated_decay MGP_LPJ_T0067870.1 MGP_LPJ_G0028743.1 mouse_genomes_project 4 131819934 131820597 + Tmem234 protein_coding retained_intron MGP_LPJ_T0067871.1 MGP_LPJ_G0028743.1 mouse_genomes_project 4 131820038 131821064 + Tmem234 protein_coding retained_intron MGP_LPJ_T0067872.1 MGP_LPJ_G0028743.1 mouse_genomes_project 4 131820857 131825979 + Tmem234 protein_coding retained_intron MGP_LPJ_T0014582.1 MGP_LPJ_G0012673.1 mouse_genomes_project 4 83120747 83121772 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001445.1 MGP_LPJ_G0001364.1 mouse_genomes_project 4 100078381 100083095 + TEC TEC MGP_LPJ_T0099494.1 MGP_LPJ_G0037757.1 mouse_genomes_project 4 86597664 86597738 + Gm26017 snRNA snRNA MGP_LPJ_T0099462.1 MGP_LPJ_G0037725.1 mouse_genomes_project 4 6345725 6345888 - Gm24152 snRNA snRNA MGP_LPJ_T0014405.1 MGP_LPJ_G0012496.1 mouse_genomes_project 4 19120390 19121818 - processed_pseudogene processed_pseudogene MGP_LPJ_T0064774.1 MGP_LPJ_G0028035.1 mouse_genomes_project 4 30214023 30338000 + MGP_LPJ_P0064774 Mdn1 protein_coding protein_coding MGP_LPJ_T0064775.1 MGP_LPJ_G0028035.1 mouse_genomes_project 4 30214023 30338010 + MGP_LPJ_P0064775 Mdn1 protein_coding protein_coding MGP_LPJ_T0064776.1 MGP_LPJ_G0028035.1 mouse_genomes_project 4 30214087 30221316 + Mdn1 protein_coding processed_transcript MGP_LPJ_T0064777.1 MGP_LPJ_G0028035.1 mouse_genomes_project 4 30228695 30236695 + Mdn1 protein_coding processed_transcript MGP_LPJ_T0064778.1 MGP_LPJ_G0028035.1 mouse_genomes_project 4 30253075 30254184 + Mdn1 protein_coding processed_transcript MGP_LPJ_T0064779.1 MGP_LPJ_G0028035.1 mouse_genomes_project 4 30262107 30337991 + Mdn1 protein_coding processed_transcript MGP_LPJ_T0064780.1 MGP_LPJ_G0028035.1 mouse_genomes_project 4 30280459 30292597 + Mdn1 protein_coding processed_transcript MGP_LPJ_T0064781.1 MGP_LPJ_G0028035.1 mouse_genomes_project 4 30287016 30289372 + Mdn1 protein_coding processed_transcript MGP_LPJ_T0064782.1 MGP_LPJ_G0028035.1 mouse_genomes_project 4 30311679 30314724 + Mdn1 protein_coding processed_transcript MGP_LPJ_T0064783.1 MGP_LPJ_G0028035.1 mouse_genomes_project 4 30311679 30312785 + Mdn1 protein_coding processed_transcript MGP_LPJ_T0064784.1 MGP_LPJ_G0028035.1 mouse_genomes_project 4 30323992 30326619 + Mdn1 protein_coding processed_transcript MGP_LPJ_T0014714.1 MGP_LPJ_G0012805.1 mouse_genomes_project 4 125625942 125627341 + processed_pseudogene processed_pseudogene MGP_LPJ_T0068675.1 MGP_LPJ_G0028915.1 mouse_genomes_project 4 141746661 141749812 - MGP_LPJ_P0068675 Gm13030 protein_coding protein_coding MGP_LPJ_T0014390.1 MGP_LPJ_G0012481.1 mouse_genomes_project 4 14014648 14015127 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065710.1 MGP_LPJ_G0028246.1 mouse_genomes_project 4 57973577 58013442 + MGP_LPJ_P0065710 Gm20503 protein_coding protein_coding MGP_LPJ_T0014620.1 MGP_LPJ_G0012711.1 mouse_genomes_project 4 97993637 97994304 - processed_pseudogene processed_pseudogene MGP_LPJ_T0069440.1 MGP_LPJ_G0029096.1 mouse_genomes_project 4 158318580 158321762 - MGP_LPJ_P0069440 Tprgl protein_coding protein_coding MGP_LPJ_T0069441.1 MGP_LPJ_G0029096.1 mouse_genomes_project 4 158319235 158321762 - Tprgl protein_coding processed_transcript MGP_LPJ_T0069442.1 MGP_LPJ_G0029096.1 mouse_genomes_project 4 158319451 158321728 - MGP_LPJ_P0069442 Tprgl protein_coding protein_coding MGP_LPJ_T0069443.1 MGP_LPJ_G0029096.1 mouse_genomes_project 4 158319568 158321262 - Tprgl protein_coding processed_transcript MGP_LPJ_T0069444.1 MGP_LPJ_G0029096.1 mouse_genomes_project 4 158320662 158321702 - Tprgl protein_coding processed_transcript MGP_LPJ_T0004531.1 MGP_LPJ_G0003938.1 mouse_genomes_project 4 115773749 115865828 - 9130410C08Rik antisense antisense MGP_LPJ_T0010597.1 MGP_LPJ_G0008715.1 mouse_genomes_project 4 19903060 19903163 + Gm24078 miRNA miRNA MGP_LPJ_T0014454.1 MGP_LPJ_G0012545.1 mouse_genomes_project 4 32525707 32526375 + processed_pseudogene processed_pseudogene MGP_LPJ_T0065513.1 MGP_LPJ_G0028189.1 mouse_genomes_project 4 46915346 46954043 - MGP_LPJ_P0065513 Tex10 protein_coding nonsense_mediated_decay MGP_LPJ_T0065514.1 MGP_LPJ_G0028189.1 mouse_genomes_project 4 46915346 46958606 - MGP_LPJ_P0065514 Tex10 protein_coding protein_coding MGP_LPJ_T0065515.1 MGP_LPJ_G0028189.1 mouse_genomes_project 4 46915444 46958569 - MGP_LPJ_P0065515 Tex10 protein_coding protein_coding MGP_LPJ_T0065516.1 MGP_LPJ_G0028189.1 mouse_genomes_project 4 46943286 46944421 - Tex10 protein_coding retained_intron MGP_LPJ_T0065517.1 MGP_LPJ_G0028189.1 mouse_genomes_project 4 46952825 46955115 - Tex10 protein_coding processed_transcript MGP_LPJ_T0065518.1 MGP_LPJ_G0028189.1 mouse_genomes_project 4 46954327 46958490 - Tex10 protein_coding retained_intron MGP_LPJ_T0067304.1 MGP_LPJ_G0028607.1 mouse_genomes_project 4 120583687 120599898 - MGP_LPJ_P0067304 Ybx1 protein_coding protein_coding MGP_LPJ_T0067305.1 MGP_LPJ_G0028607.1 mouse_genomes_project 4 120583696 120588389 - MGP_LPJ_P0067305 Ybx1 protein_coding protein_coding MGP_LPJ_T0067306.1 MGP_LPJ_G0028607.1 mouse_genomes_project 4 120583873 120585157 - Ybx1 protein_coding processed_transcript MGP_LPJ_T0067307.1 MGP_LPJ_G0028607.1 mouse_genomes_project 4 120586739 120587783 - Ybx1 protein_coding processed_transcript MGP_LPJ_T0067308.1 MGP_LPJ_G0028607.1 mouse_genomes_project 4 120587869 120599784 - Ybx1 protein_coding processed_transcript MGP_LPJ_T0067309.1 MGP_LPJ_G0028607.1 mouse_genomes_project 4 120599015 120599794 - Ybx1 protein_coding processed_transcript MGP_LPJ_T0014477.1 MGP_LPJ_G0012568.1 mouse_genomes_project 4 39253347 39253575 + processed_pseudogene processed_pseudogene MGP_LPJ_T0064679.1 MGP_LPJ_G0028016.1 mouse_genomes_project 4 18858839 18877562 + Usp45 protein_coding processed_transcript MGP_LPJ_T0064680.1 MGP_LPJ_G0028016.1 mouse_genomes_project 4 18871337 18879910 + Usp45 protein_coding retained_intron MGP_LPJ_T0064681.1 MGP_LPJ_G0028016.1 mouse_genomes_project 4 18871348 18935908 + MGP_LPJ_P0064681 Usp45 protein_coding protein_coding MGP_LPJ_T0064682.1 MGP_LPJ_G0028016.1 mouse_genomes_project 4 18871348 18935910 + MGP_LPJ_P0064682 Usp45 protein_coding protein_coding MGP_LPJ_T0064683.1 MGP_LPJ_G0028016.1 mouse_genomes_project 4 18871357 18896024 + MGP_LPJ_P0064683 Usp45 protein_coding protein_coding MGP_LPJ_T0064684.1 MGP_LPJ_G0028016.1 mouse_genomes_project 4 18871374 18935910 + MGP_LPJ_P0064684 Usp45 protein_coding nonsense_mediated_decay MGP_LPJ_T0064685.1 MGP_LPJ_G0028016.1 mouse_genomes_project 4 18876822 18935908 + MGP_LPJ_P0064685 Usp45 protein_coding nonsense_mediated_decay MGP_LPJ_T0064686.1 MGP_LPJ_G0028016.1 mouse_genomes_project 4 18879793 18915056 + MGP_LPJ_P0064686 Usp45 protein_coding nonsense_mediated_decay MGP_LPJ_T0014585.1 MGP_LPJ_G0012676.1 mouse_genomes_project 4 83671857 83673417 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014691.1 MGP_LPJ_G0012782.1 mouse_genomes_project 4 119729973 119730400 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099544.1 MGP_LPJ_G0037807.1 mouse_genomes_project 4 153287315 153287419 - Gm24381 snRNA snRNA MGP_LPJ_T0010604.1 MGP_LPJ_G0008722.1 mouse_genomes_project 4 34431059 34431136 + Mir873b miRNA miRNA MGP_LPJ_T0014725.1 MGP_LPJ_G0012816.1 mouse_genomes_project 4 129046684 129046904 + processed_pseudogene processed_pseudogene MGP_LPJ_T0068983.1 MGP_LPJ_G0029010.1 mouse_genomes_project 4 151484793 151493342 - MGP_LPJ_P0068983 Miip protein_coding protein_coding MGP_LPJ_T0068984.1 MGP_LPJ_G0029010.1 mouse_genomes_project 4 151484801 151493439 - MGP_LPJ_P0068984 Miip protein_coding protein_coding MGP_LPJ_T0068985.1 MGP_LPJ_G0029010.1 mouse_genomes_project 4 151484805 151486776 - Miip protein_coding retained_intron MGP_LPJ_T0068986.1 MGP_LPJ_G0029010.1 mouse_genomes_project 4 151484806 151493122 - Miip protein_coding retained_intron MGP_LPJ_T0068987.1 MGP_LPJ_G0029010.1 mouse_genomes_project 4 151484806 151493106 - MGP_LPJ_P0068987 Miip protein_coding protein_coding MGP_LPJ_T0068988.1 MGP_LPJ_G0029010.1 mouse_genomes_project 4 151486813 151493289 - Miip protein_coding retained_intron MGP_LPJ_T0068989.1 MGP_LPJ_G0029010.1 mouse_genomes_project 4 151487566 151489881 - Miip protein_coding retained_intron MGP_LPJ_T0068990.1 MGP_LPJ_G0029010.1 mouse_genomes_project 4 151490469 151493146 - Miip protein_coding retained_intron MGP_LPJ_T0065972.1 MGP_LPJ_G0028315.1 mouse_genomes_project 4 82822050 82980965 - MGP_LPJ_P0065972 Frem1 protein_coding protein_coding MGP_LPJ_T0065973.1 MGP_LPJ_G0028315.1 mouse_genomes_project 4 82822057 82949283 - MGP_LPJ_P0065973 Frem1 protein_coding protein_coding MGP_LPJ_T0065974.1 MGP_LPJ_G0028315.1 mouse_genomes_project 4 82822057 82981137 - MGP_LPJ_P0065974 Frem1 protein_coding protein_coding MGP_LPJ_T0065975.1 MGP_LPJ_G0028315.1 mouse_genomes_project 4 82824694 82837914 - Frem1 protein_coding processed_transcript MGP_LPJ_T0065976.1 MGP_LPJ_G0028315.1 mouse_genomes_project 4 82839112 82848271 - Frem1 protein_coding retained_intron MGP_LPJ_T0065977.1 MGP_LPJ_G0028315.1 mouse_genomes_project 4 82859144 82863916 - Frem1 protein_coding retained_intron MGP_LPJ_T0065978.1 MGP_LPJ_G0028315.1 mouse_genomes_project 4 82861461 82898264 - MGP_LPJ_P0065978 Frem1 protein_coding protein_coding MGP_LPJ_T0065979.1 MGP_LPJ_G0028315.1 mouse_genomes_project 4 82921356 82981137 - Frem1 protein_coding processed_transcript MGP_LPJ_T0068844.1 MGP_LPJ_G0028959.1 mouse_genomes_project 4 144528082 144552048 + MGP_LPJ_P0068844 Zbtb17 protein_coding protein_coding MGP_LPJ_T0068845.1 MGP_LPJ_G0028959.1 mouse_genomes_project 4 144528112 144552745 + Zbtb17 protein_coding processed_transcript MGP_LPJ_T0068846.1 MGP_LPJ_G0028959.1 mouse_genomes_project 4 144528127 144552048 + Zbtb17 protein_coding processed_transcript MGP_LPJ_T0068847.1 MGP_LPJ_G0028959.1 mouse_genomes_project 4 144528134 144544201 + Zbtb17 protein_coding processed_transcript MGP_LPJ_T0068848.1 MGP_LPJ_G0028959.1 mouse_genomes_project 4 144548159 144549832 + Zbtb17 protein_coding processed_transcript MGP_LPJ_T0068849.1 MGP_LPJ_G0028959.1 mouse_genomes_project 4 144549602 144550891 + Zbtb17 protein_coding processed_transcript MGP_LPJ_T0068850.1 MGP_LPJ_G0028959.1 mouse_genomes_project 4 144550200 144551892 + Zbtb17 protein_coding processed_transcript MGP_LPJ_T0007854.1 MGP_LPJ_G0006422.1 mouse_genomes_project 4 45416930 45419396 - Gm568 lincRNA lincRNA MGP_LPJ_T0064978.1 MGP_LPJ_G0028085.1 mouse_genomes_project 4 39530278 39533034 - 1110017D15Rik protein_coding processed_transcript MGP_LPJ_T0064979.1 MGP_LPJ_G0028085.1 mouse_genomes_project 4 39530278 39533024 - 1110017D15Rik protein_coding processed_transcript MGP_LPJ_T0064980.1 MGP_LPJ_G0028085.1 mouse_genomes_project 4 39530278 39533029 - 1110017D15Rik protein_coding processed_transcript MGP_LPJ_T0064981.1 MGP_LPJ_G0028085.1 mouse_genomes_project 4 39530278 39536737 - MGP_LPJ_P0064981 1110017D15Rik protein_coding protein_coding MGP_LPJ_T0064982.1 MGP_LPJ_G0028085.1 mouse_genomes_project 4 39530278 39544449 - MGP_LPJ_P0064982 1110017D15Rik protein_coding protein_coding MGP_LPJ_T0064983.1 MGP_LPJ_G0028085.1 mouse_genomes_project 4 39530278 39544449 - MGP_LPJ_P0064983 1110017D15Rik protein_coding protein_coding MGP_LPJ_T0064984.1 MGP_LPJ_G0028085.1 mouse_genomes_project 4 39532394 39544444 - 1110017D15Rik protein_coding processed_transcript MGP_LPJ_T0064985.1 MGP_LPJ_G0028085.1 mouse_genomes_project 4 39533803 39534234 - 1110017D15Rik protein_coding processed_transcript MGP_LPJ_T0066774.1 MGP_LPJ_G0028488.1 mouse_genomes_project 4 110721488 111038689 + MGP_LPJ_P0066774 Faf1 protein_coding protein_coding MGP_LPJ_T0066775.1 MGP_LPJ_G0028488.1 mouse_genomes_project 4 110721897 110728075 + Faf1 protein_coding processed_transcript MGP_LPJ_T0066776.1 MGP_LPJ_G0028488.1 mouse_genomes_project 4 110905110 110999644 + Faf1 protein_coding processed_transcript MGP_LPJ_T0007838.1 MGP_LPJ_G0006407.1 mouse_genomes_project 4 28150105 28282751 + 4930556G01Rik lincRNA lincRNA MGP_LPJ_T0100775.1 MGP_LPJ_G0039038.1 mouse_genomes_project 4 74966450 74966580 - Gm22864 snoRNA snoRNA MGP_LPJ_T0067383.1 MGP_LPJ_G0028623.1 mouse_genomes_project 4 121978631 122007162 + MGP_LPJ_P0067383 Gm8439 protein_coding protein_coding MGP_LPJ_T0099530.1 MGP_LPJ_G0037793.1 mouse_genomes_project 4 134868620 134868724 - Gm24762 snRNA snRNA MGP_LPJ_T0014705.1 MGP_LPJ_G0012796.1 mouse_genomes_project 4 122805214 122805455 + processed_pseudogene processed_pseudogene MGP_LPJ_T0068851.1 MGP_LPJ_G0028960.1 mouse_genomes_project 4 144552704 144633984 - MGP_LPJ_P0068851 Spen protein_coding protein_coding MGP_LPJ_T0068852.1 MGP_LPJ_G0028960.1 mouse_genomes_project 4 144552704 144633836 - MGP_LPJ_P0068852 Spen protein_coding protein_coding MGP_LPJ_T0068853.1 MGP_LPJ_G0028960.1 mouse_genomes_project 4 144553263 144558273 - Spen protein_coding processed_transcript MGP_LPJ_T0068854.1 MGP_LPJ_G0028960.1 mouse_genomes_project 4 144571324 144575030 - Spen protein_coding processed_transcript MGP_LPJ_T0068855.1 MGP_LPJ_G0028960.1 mouse_genomes_project 4 144583097 144607687 - Spen protein_coding processed_transcript MGP_LPJ_T0068856.1 MGP_LPJ_G0028960.1 mouse_genomes_project 4 144614546 144633640 - Spen protein_coding processed_transcript MGP_LPJ_T0065819.1 MGP_LPJ_G0028276.1 mouse_genomes_project 4 62484972 62569403 + Col27a1 protein_coding retained_intron MGP_LPJ_T0065820.1 MGP_LPJ_G0028276.1 mouse_genomes_project 4 62486380 62550404 + Col27a1 protein_coding retained_intron MGP_LPJ_T0065821.1 MGP_LPJ_G0028276.1 mouse_genomes_project 4 62486403 62611988 + MGP_LPJ_P0065821 Col27a1 protein_coding protein_coding MGP_LPJ_T0065822.1 MGP_LPJ_G0028276.1 mouse_genomes_project 4 62486794 62610304 + MGP_LPJ_P0065822 Col27a1 protein_coding unknown_likely_coding MGP_LPJ_T0065823.1 MGP_LPJ_G0028276.1 mouse_genomes_project 4 62505237 62610710 + MGP_LPJ_P0065823 Col27a1 protein_coding nonsense_mediated_decay MGP_LPJ_T0065824.1 MGP_LPJ_G0028276.1 mouse_genomes_project 4 62558004 62610717 + MGP_LPJ_P0065824 Col27a1 protein_coding nonsense_mediated_decay MGP_LPJ_T0065825.1 MGP_LPJ_G0028276.1 mouse_genomes_project 4 62558850 62610746 + Col27a1 protein_coding retained_intron MGP_LPJ_T0065826.1 MGP_LPJ_G0028276.1 mouse_genomes_project 4 62607972 62611135 + Col27a1 protein_coding processed_transcript MGP_LPJ_T0008008.1 MGP_LPJ_G0006535.1 mouse_genomes_project 4 137635123 137637350 - Gm16225 lincRNA lincRNA MGP_LPJ_T0004626.1 MGP_LPJ_G0004013.1 mouse_genomes_project 4 154773971 154800461 - 1700045H11Rik antisense antisense MGP_LPJ_T0001449.1 MGP_LPJ_G0001368.1 mouse_genomes_project 4 124810952 124816289 - TEC TEC MGP_LPJ_T0001450.1 MGP_LPJ_G0001368.1 mouse_genomes_project 4 124813110 124816211 - TEC TEC MGP_LPJ_T0069477.1 MGP_LPJ_G0029103.1 mouse_genomes_project 4 159071180 159100582 + MGP_LPJ_P0069477 Mmel1 protein_coding protein_coding MGP_LPJ_T0069478.1 MGP_LPJ_G0029103.1 mouse_genomes_project 4 159071180 159100589 + MGP_LPJ_P0069478 Mmel1 protein_coding protein_coding MGP_LPJ_T0069479.1 MGP_LPJ_G0029103.1 mouse_genomes_project 4 159071231 159100589 + MGP_LPJ_P0069479 Mmel1 protein_coding protein_coding MGP_LPJ_T0069480.1 MGP_LPJ_G0029103.1 mouse_genomes_project 4 159073200 159100582 + MGP_LPJ_P0069480 Mmel1 protein_coding protein_coding MGP_LPJ_T0069481.1 MGP_LPJ_G0029103.1 mouse_genomes_project 4 159073234 159100582 + MGP_LPJ_P0069481 Mmel1 protein_coding protein_coding MGP_LPJ_T0069482.1 MGP_LPJ_G0029103.1 mouse_genomes_project 4 159086520 159090740 + MGP_LPJ_P0069482 Mmel1 protein_coding protein_coding MGP_LPJ_T0069483.1 MGP_LPJ_G0029103.1 mouse_genomes_project 4 159097885 159099016 + Mmel1 protein_coding retained_intron MGP_LPJ_T0066116.1 MGP_LPJ_G0028341.1 mouse_genomes_project 4 88870888 88871707 - MGP_LPJ_P0066116 Ifna13 protein_coding protein_coding MGP_LPJ_T0099495.1 MGP_LPJ_G0037758.1 mouse_genomes_project 4 93192342 93192450 - Gm22605 snRNA snRNA MGP_LPJ_T0007865.1 MGP_LPJ_G0006430.1 mouse_genomes_project 4 53920845 54074819 - Gm12514 lincRNA lincRNA MGP_LPJ_T0007866.1 MGP_LPJ_G0006430.1 mouse_genomes_project 4 53921082 53925142 - Gm12514 lincRNA lincRNA MGP_LPJ_T0007879.1 MGP_LPJ_G0006441.1 mouse_genomes_project 4 61969951 61983095 + Gm11210 lincRNA lincRNA MGP_LPJ_T0066448.1 MGP_LPJ_G0028426.1 mouse_genomes_project 4 105578490 105581332 + MGP_LPJ_P0066448 Gm17662 protein_coding protein_coding MGP_LPJ_T0067261.1 MGP_LPJ_G0028596.1 mouse_genomes_project 4 120196873 120197821 - MGP_LPJ_P0067261 protein_coding protein_coding MGP_LPJ_T0069743.1 MGP_LPJ_G0029154.1 mouse_genomes_project 4 160549237 160556312 - MGP_LPJ_P0069743 Plekhn1 protein_coding protein_coding MGP_LPJ_T0069744.1 MGP_LPJ_G0029154.1 mouse_genomes_project 4 160549560 160556261 - MGP_LPJ_P0069744 Plekhn1 protein_coding unknown_likely_coding MGP_LPJ_T0066957.1 MGP_LPJ_G0028532.1 mouse_genomes_project 4 117191485 117207026 + Pomgnt1 protein_coding processed_transcript MGP_LPJ_T0066959.1 MGP_LPJ_G0028532.1 mouse_genomes_project 4 117205412 117234211 + MGP_LPJ_P0066959 Pomgnt1 protein_coding protein_coding MGP_LPJ_T0066960.1 MGP_LPJ_G0028532.1 mouse_genomes_project 4 117205427 117234212 + Pomgnt1 protein_coding retained_intron MGP_LPJ_T0066962.1 MGP_LPJ_G0028532.1 mouse_genomes_project 4 117205930 117234207 + MGP_LPJ_P0066962 Pomgnt1 protein_coding protein_coding MGP_LPJ_T0066963.1 MGP_LPJ_G0028532.1 mouse_genomes_project 4 117224880 117234207 + MGP_LPJ_P0066963 Pomgnt1 protein_coding protein_coding MGP_LPJ_T0066964.1 MGP_LPJ_G0028532.1 mouse_genomes_project 4 117224887 117234207 + MGP_LPJ_P0066964 Pomgnt1 protein_coding protein_coding MGP_LPJ_T0066965.1 MGP_LPJ_G0028532.1 mouse_genomes_project 4 117225793 117233800 + MGP_LPJ_P0066965 Pomgnt1 protein_coding protein_coding MGP_LPJ_T0066966.1 MGP_LPJ_G0028532.1 mouse_genomes_project 4 117228957 117230155 + Pomgnt1 protein_coding processed_transcript MGP_LPJ_T0066967.1 MGP_LPJ_G0028532.1 mouse_genomes_project 4 117229681 117233357 + Pomgnt1 protein_coding retained_intron MGP_LPJ_T0066968.1 MGP_LPJ_G0028532.1 mouse_genomes_project 4 117230299 117231016 + Pomgnt1 protein_coding retained_intron MGP_LPJ_T0066969.1 MGP_LPJ_G0028532.1 mouse_genomes_project 4 117230311 117233421 + Pomgnt1 protein_coding processed_transcript MGP_LPJ_T0066970.1 MGP_LPJ_G0028532.1 mouse_genomes_project 4 117231754 117233388 + Pomgnt1 protein_coding retained_intron MGP_LPJ_T0018004.1 MGP_LPJ_G0015466.1 mouse_genomes_project 4 71772652 71786632 + C630043F03Rik processed_transcript processed_transcript MGP_LPJ_T0069698.1 MGP_LPJ_G0029143.1 mouse_genomes_project 4 160266153 160270465 + MGP_LPJ_P0069698 Fam132a protein_coding protein_coding MGP_LPJ_T0069699.1 MGP_LPJ_G0029143.1 mouse_genomes_project 4 160268396 160269018 + Fam132a protein_coding processed_transcript MGP_LPJ_T0069700.1 MGP_LPJ_G0029143.1 mouse_genomes_project 4 160268932 160270457 + Fam132a protein_coding processed_transcript MGP_LPJ_T0100754.1 MGP_LPJ_G0039017.1 mouse_genomes_project 4 47410168 47410293 + Gm23746 snoRNA snoRNA MGP_LPJ_T0066108.1 MGP_LPJ_G0028337.1 mouse_genomes_project 4 88798600 88799170 - MGP_LPJ_P0066108 Ifna14 protein_coding protein_coding MGP_LPJ_T0068146.1 MGP_LPJ_G0028797.1 mouse_genomes_project 4 135359469 135419693 + Ahdc1 protein_coding processed_transcript MGP_LPJ_T0068147.1 MGP_LPJ_G0028797.1 mouse_genomes_project 4 135359715 135436645 + MGP_LPJ_P0068147 Ahdc1 protein_coding protein_coding MGP_LPJ_T0068148.1 MGP_LPJ_G0028797.1 mouse_genomes_project 4 135359715 135436892 + MGP_LPJ_P0068148 Ahdc1 protein_coding protein_coding MGP_LPJ_T0068149.1 MGP_LPJ_G0028797.1 mouse_genomes_project 4 135359752 135419984 + Ahdc1 protein_coding processed_transcript MGP_LPJ_T0068150.1 MGP_LPJ_G0028797.1 mouse_genomes_project 4 135359774 135414164 + Ahdc1 protein_coding processed_transcript MGP_LPJ_T0068151.1 MGP_LPJ_G0028797.1 mouse_genomes_project 4 135360047 135436434 + Ahdc1 protein_coding processed_transcript MGP_LPJ_T0068152.1 MGP_LPJ_G0028797.1 mouse_genomes_project 4 135360259 135419695 + Ahdc1 protein_coding processed_transcript MGP_LPJ_T0068153.1 MGP_LPJ_G0028797.1 mouse_genomes_project 4 135360301 135420649 + Ahdc1 protein_coding processed_transcript MGP_LPJ_T0068154.1 MGP_LPJ_G0028797.1 mouse_genomes_project 4 135360413 135436435 + MGP_LPJ_P0068154 Ahdc1 protein_coding protein_coding MGP_LPJ_T0068155.1 MGP_LPJ_G0028797.1 mouse_genomes_project 4 135398576 135436046 + MGP_LPJ_P0068155 Ahdc1 protein_coding protein_coding MGP_LPJ_T0068156.1 MGP_LPJ_G0028797.1 mouse_genomes_project 4 135425124 135430848 + Ahdc1 protein_coding processed_transcript MGP_LPJ_T0100730.1 MGP_LPJ_G0038993.1 mouse_genomes_project 4 371197 371265 - Gm24016 snoRNA snoRNA MGP_LPJ_T0065716.1 MGP_LPJ_G0028249.1 mouse_genomes_project 4 58175048 58213209 + MGP_LPJ_P0065716 Ugcg protein_coding protein_coding MGP_LPJ_T0065717.1 MGP_LPJ_G0028249.1 mouse_genomes_project 4 58175346 58197520 + Ugcg protein_coding processed_transcript MGP_LPJ_T0065718.1 MGP_LPJ_G0028249.1 mouse_genomes_project 4 58197036 58199228 + Ugcg protein_coding processed_transcript MGP_LPJ_T0065719.1 MGP_LPJ_G0028249.1 mouse_genomes_project 4 58197972 58199612 + Ugcg protein_coding processed_transcript MGP_LPJ_T0014626.1 MGP_LPJ_G0012717.1 mouse_genomes_project 4 99637276 99637995 - processed_pseudogene processed_pseudogene MGP_LPJ_T0064456.1 MGP_LPJ_G0027959.1 mouse_genomes_project 4 2748818 2780430 + MGP_LPJ_P0064456 Ubxn2b protein_coding protein_coding MGP_LPJ_T0014776.1 MGP_LPJ_G0012867.1 mouse_genomes_project 4 152260184 152261005 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065602.1 MGP_LPJ_G0028218.1 mouse_genomes_project 4 52585506 52625103 + MGP_LPJ_P0065602 Tmem38b protein_coding protein_coding MGP_LPJ_T0065603.1 MGP_LPJ_G0028218.1 mouse_genomes_project 4 52585518 52608082 + Tmem38b protein_coding processed_transcript MGP_LPJ_T0065604.1 MGP_LPJ_G0028218.1 mouse_genomes_project 4 52600707 52616830 + MGP_LPJ_P0065604 Tmem38b protein_coding protein_coding MGP_LPJ_T0068266.1 MGP_LPJ_G0028822.1 mouse_genomes_project 4 136498258 136510863 - Cd52 protein_coding processed_transcript MGP_LPJ_T0068269.1 MGP_LPJ_G0028822.1 mouse_genomes_project 4 136509357 136510904 - MGP_LPJ_P0068269 Cd52 protein_coding protein_coding MGP_LPJ_T0068270.1 MGP_LPJ_G0028822.1 mouse_genomes_project 4 136509897 136510860 - Cd52 protein_coding processed_transcript MGP_LPJ_T0010648.1 MGP_LPJ_G0008766.1 mouse_genomes_project 4 134504479 134504559 - Gm22033 miRNA miRNA MGP_LPJ_T0014542.1 MGP_LPJ_G0012633.1 mouse_genomes_project 4 66929177 66929817 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004442.1 MGP_LPJ_G0003873.1 mouse_genomes_project 4 5931045 5934436 - Gm11816 antisense antisense MGP_LPJ_T0004443.1 MGP_LPJ_G0003873.1 mouse_genomes_project 4 5932900 5934378 - Gm11816 antisense antisense MGP_LPJ_T0014538.1 MGP_LPJ_G0012629.1 mouse_genomes_project 4 64348595 64348953 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004630.1 MGP_LPJ_G0004017.1 mouse_genomes_project 4 158249980 158254847 + Trp73os antisense antisense MGP_LPJ_T0010596.1 MGP_LPJ_G0008714.1 mouse_genomes_project 4 13055529 13055641 - Gm22690 miRNA miRNA MGP_LPJ_T0066940.1 MGP_LPJ_G0028529.1 mouse_genomes_project 4 117129757 117137571 - Uqcrh protein_coding processed_transcript MGP_LPJ_T0066941.1 MGP_LPJ_G0028529.1 mouse_genomes_project 4 117129757 117137608 - MGP_LPJ_P0066941 Uqcrh protein_coding protein_coding MGP_LPJ_T0066942.1 MGP_LPJ_G0028529.1 mouse_genomes_project 4 117129757 117137568 - MGP_LPJ_P0066942 Uqcrh protein_coding protein_coding MGP_LPJ_T0066943.1 MGP_LPJ_G0028529.1 mouse_genomes_project 4 117129758 117132616 - Uqcrh protein_coding retained_intron MGP_LPJ_T0066944.1 MGP_LPJ_G0028529.1 mouse_genomes_project 4 117132638 117137596 - Uqcrh protein_coding retained_intron MGP_LPJ_T0100751.1 MGP_LPJ_G0039014.1 mouse_genomes_project 4 42656486 42656613 - Gm24376 snoRNA snoRNA MGP_LPJ_T0014406.1 MGP_LPJ_G0012497.1 mouse_genomes_project 4 19246796 19247195 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007835.1 MGP_LPJ_G0006404.1 mouse_genomes_project 4 26509316 26530372 + Gm11917 lincRNA lincRNA MGP_LPJ_T0066153.1 MGP_LPJ_G0028361.1 mouse_genomes_project 4 94876505 94936619 - MGP_LPJ_P0066153 Caap1 protein_coding protein_coding MGP_LPJ_T0066154.1 MGP_LPJ_G0028361.1 mouse_genomes_project 4 94928736 94936589 - Caap1 protein_coding processed_transcript MGP_LPJ_T0065403.1 MGP_LPJ_G0028163.1 mouse_genomes_project 4 44168015 44208381 + MGP_LPJ_P0065403 Stra6l protein_coding protein_coding MGP_LPJ_T0065404.1 MGP_LPJ_G0028163.1 mouse_genomes_project 4 44168167 44208381 + MGP_LPJ_P0065404 Stra6l protein_coding protein_coding MGP_LPJ_T0065405.1 MGP_LPJ_G0028163.1 mouse_genomes_project 4 44168298 44208381 + MGP_LPJ_P0065405 Stra6l protein_coding protein_coding MGP_LPJ_T0065406.1 MGP_LPJ_G0028163.1 mouse_genomes_project 4 44168348 44180148 + Stra6l protein_coding processed_transcript MGP_LPJ_T0065407.1 MGP_LPJ_G0028163.1 mouse_genomes_project 4 44195389 44207991 + Stra6l protein_coding retained_intron MGP_LPJ_T0064539.1 MGP_LPJ_G0027974.1 mouse_genomes_project 4 7920372 7922983 + Ccne2 protein_coding processed_transcript MGP_LPJ_T0064540.1 MGP_LPJ_G0027974.1 mouse_genomes_project 4 7920375 7933711 + MGP_LPJ_P0064540 Ccne2 protein_coding protein_coding MGP_LPJ_T0064541.1 MGP_LPJ_G0027974.1 mouse_genomes_project 4 7920730 7924177 + Ccne2 protein_coding processed_transcript MGP_LPJ_T0064542.1 MGP_LPJ_G0027974.1 mouse_genomes_project 4 7920747 7933815 + MGP_LPJ_P0064542 Ccne2 protein_coding protein_coding MGP_LPJ_T0064543.1 MGP_LPJ_G0027974.1 mouse_genomes_project 4 7920751 7933718 + MGP_LPJ_P0064543 Ccne2 protein_coding protein_coding MGP_LPJ_T0064544.1 MGP_LPJ_G0027974.1 mouse_genomes_project 4 7920757 7924059 + Ccne2 protein_coding processed_transcript MGP_LPJ_T0064545.1 MGP_LPJ_G0027974.1 mouse_genomes_project 4 7921618 7922257 + Ccne2 protein_coding processed_transcript MGP_LPJ_T0069553.1 MGP_LPJ_G0029115.1 mouse_genomes_project 4 159630815 159645980 - Gabrd protein_coding processed_transcript MGP_LPJ_T0069554.1 MGP_LPJ_G0029115.1 mouse_genomes_project 4 159630815 159646045 - MGP_LPJ_P0069554 Gabrd protein_coding protein_coding MGP_LPJ_T0069555.1 MGP_LPJ_G0029115.1 mouse_genomes_project 4 159634400 159645969 - Gabrd protein_coding processed_transcript MGP_LPJ_T0068722.1 MGP_LPJ_G0028928.1 mouse_genomes_project 4 142258534 142378495 + MGP_LPJ_P0068722 Ubr4 protein_coding protein_coding MGP_LPJ_T0068724.1 MGP_LPJ_G0028928.1 mouse_genomes_project 4 142287397 142399442 + MGP_LPJ_P0068724 Ubr4 protein_coding protein_coding MGP_LPJ_T0068725.1 MGP_LPJ_G0028928.1 mouse_genomes_project 4 142287397 142399500 + MGP_LPJ_P0068725 Ubr4 protein_coding protein_coding MGP_LPJ_T0068726.1 MGP_LPJ_G0028928.1 mouse_genomes_project 4 142287407 142304311 + Ubr4 protein_coding processed_transcript MGP_LPJ_T0068727.1 MGP_LPJ_G0028928.1 mouse_genomes_project 4 142321074 142360674 + MGP_LPJ_P0068727 Ubr4 protein_coding protein_coding MGP_LPJ_T0068728.1 MGP_LPJ_G0028928.1 mouse_genomes_project 4 142322816 142323631 + Ubr4 protein_coding retained_intron MGP_LPJ_T0068729.1 MGP_LPJ_G0028928.1 mouse_genomes_project 4 142341543 142344676 + MGP_LPJ_P0068729 Ubr4 protein_coding protein_coding MGP_LPJ_T0068730.1 MGP_LPJ_G0028928.1 mouse_genomes_project 4 142371990 142372707 + Ubr4 protein_coding retained_intron MGP_LPJ_T0068731.1 MGP_LPJ_G0028928.1 mouse_genomes_project 4 142385784 142390760 + Ubr4 protein_coding retained_intron MGP_LPJ_T0068732.1 MGP_LPJ_G0028928.1 mouse_genomes_project 4 142388893 142392550 + Ubr4 protein_coding processed_transcript MGP_LPJ_T0068733.1 MGP_LPJ_G0028928.1 mouse_genomes_project 4 142389076 142391003 + Ubr4 protein_coding retained_intron MGP_LPJ_T0068734.1 MGP_LPJ_G0028928.1 mouse_genomes_project 4 142390329 142392632 + Ubr4 protein_coding retained_intron MGP_LPJ_T0068206.1 MGP_LPJ_G0028811.1 mouse_genomes_project 4 135960981 135971907 + MGP_LPJ_P0068206 Gpatch3 protein_coding protein_coding MGP_LPJ_T0068207.1 MGP_LPJ_G0028811.1 mouse_genomes_project 4 135967055 135970362 + Gpatch3 protein_coding processed_transcript MGP_LPJ_T0067847.1 MGP_LPJ_G0028742.1 mouse_genomes_project 4 131808902 131819495 - MGP_LPJ_P0067847 Eif3i protein_coding protein_coding MGP_LPJ_T0067848.1 MGP_LPJ_G0028742.1 mouse_genomes_project 4 131810273 131814651 - Eif3i protein_coding retained_intron MGP_LPJ_T0067849.1 MGP_LPJ_G0028742.1 mouse_genomes_project 4 131810470 131819446 - MGP_LPJ_P0067849 Eif3i protein_coding protein_coding MGP_LPJ_T0067850.1 MGP_LPJ_G0028742.1 mouse_genomes_project 4 131814009 131819446 - Eif3i protein_coding processed_transcript MGP_LPJ_T0067851.1 MGP_LPJ_G0028742.1 mouse_genomes_project 4 131817054 131819463 - Eif3i protein_coding retained_intron MGP_LPJ_T0065457.1 MGP_LPJ_G0028176.1 mouse_genomes_project 4 44904417 44945763 - MGP_LPJ_P0065457 Coro2a protein_coding protein_coding MGP_LPJ_T0065458.1 MGP_LPJ_G0028176.1 mouse_genomes_project 4 44904423 44945781 - MGP_LPJ_P0065458 Coro2a protein_coding protein_coding MGP_LPJ_T0065459.1 MGP_LPJ_G0028176.1 mouse_genomes_project 4 44904423 44977378 - MGP_LPJ_P0065459 Coro2a protein_coding protein_coding MGP_LPJ_T0065460.1 MGP_LPJ_G0028176.1 mouse_genomes_project 4 44908003 44920245 - Coro2a protein_coding processed_transcript MGP_LPJ_T0065461.1 MGP_LPJ_G0028176.1 mouse_genomes_project 4 44908782 44920381 - Coro2a protein_coding retained_intron MGP_LPJ_T0065462.1 MGP_LPJ_G0028176.1 mouse_genomes_project 4 44920579 44977051 - Coro2a protein_coding retained_intron MGP_LPJ_T0018035.1 MGP_LPJ_G0015490.1 mouse_genomes_project 4 126584548 126602542 - Gm12915 processed_transcript processed_transcript MGP_LPJ_T0065768.1 MGP_LPJ_G0028264.1 mouse_genomes_project 4 61675438 61693589 + MGP_LPJ_P0065768 Prpf4 protein_coding protein_coding MGP_LPJ_T0065769.1 MGP_LPJ_G0028264.1 mouse_genomes_project 4 61688442 61689930 + Prpf4 protein_coding processed_transcript MGP_LPJ_T0066934.1 MGP_LPJ_G0028528.1 mouse_genomes_project 4 117097092 117116889 - MGP_LPJ_P0066934 protein_coding protein_coding MGP_LPJ_T0066935.1 MGP_LPJ_G0028528.1 mouse_genomes_project 4 117097255 117111510 - MGP_LPJ_P0066935 protein_coding nonsense_mediated_decay MGP_LPJ_T0066936.1 MGP_LPJ_G0028528.1 mouse_genomes_project 4 117098157 117116393 - MGP_LPJ_P0066936 protein_coding protein_coding MGP_LPJ_T0066937.1 MGP_LPJ_G0028528.1 mouse_genomes_project 4 117104425 117109984 - protein_coding processed_transcript MGP_LPJ_T0066938.1 MGP_LPJ_G0028528.1 mouse_genomes_project 4 117108826 117111379 - protein_coding retained_intron MGP_LPJ_T0066939.1 MGP_LPJ_G0028528.1 mouse_genomes_project 4 117111479 117112416 - protein_coding processed_transcript MGP_LPJ_T0066848.1 MGP_LPJ_G0028500.1 mouse_genomes_project 4 114109486 115186636 + MGP_LPJ_P0066848 protein_coding protein_coding MGP_LPJ_T0014739.1 MGP_LPJ_G0012830.1 mouse_genomes_project 4 136281212 136281396 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014673.1 MGP_LPJ_G0012764.1 mouse_genomes_project 4 116419365 116419690 - processed_pseudogene processed_pseudogene MGP_LPJ_T0067524.1 MGP_LPJ_G0028666.1 mouse_genomes_project 4 126654953 126702708 + MGP_LPJ_P0067524 Mtf1 protein_coding protein_coding MGP_LPJ_T0067525.1 MGP_LPJ_G0028666.1 mouse_genomes_project 4 126655398 126703129 + MGP_LPJ_P0067525 Mtf1 protein_coding protein_coding MGP_LPJ_T0067526.1 MGP_LPJ_G0028666.1 mouse_genomes_project 4 126655398 126672831 + MGP_LPJ_P0067526 Mtf1 protein_coding protein_coding MGP_LPJ_T0067527.1 MGP_LPJ_G0028666.1 mouse_genomes_project 4 126655431 126658210 + Mtf1 protein_coding retained_intron MGP_LPJ_T0067528.1 MGP_LPJ_G0028666.1 mouse_genomes_project 4 126655527 126657572 + MGP_LPJ_P0067528 Mtf1 protein_coding protein_coding MGP_LPJ_T0069270.1 MGP_LPJ_G0029067.1 mouse_genomes_project 4 155939703 155992593 + MGP_LPJ_P0069270 Dnajc11 protein_coding protein_coding MGP_LPJ_T0069271.1 MGP_LPJ_G0029067.1 mouse_genomes_project 4 155939743 155985987 + Dnajc11 protein_coding retained_intron MGP_LPJ_T0069272.1 MGP_LPJ_G0029067.1 mouse_genomes_project 4 155939746 155965756 + Dnajc11 protein_coding retained_intron MGP_LPJ_T0069273.1 MGP_LPJ_G0029067.1 mouse_genomes_project 4 155939751 155991674 + Dnajc11 protein_coding retained_intron MGP_LPJ_T0069274.1 MGP_LPJ_G0029067.1 mouse_genomes_project 4 155939756 155991678 + MGP_LPJ_P0069274 Dnajc11 protein_coding nonsense_mediated_decay MGP_LPJ_T0069275.1 MGP_LPJ_G0029067.1 mouse_genomes_project 4 155954623 155977874 + MGP_LPJ_P0069275 Dnajc11 protein_coding protein_coding MGP_LPJ_T0069276.1 MGP_LPJ_G0029067.1 mouse_genomes_project 4 155965403 155980804 + Dnajc11 protein_coding processed_transcript MGP_LPJ_T0069277.1 MGP_LPJ_G0029067.1 mouse_genomes_project 4 155977095 155983587 + Dnajc11 protein_coding processed_transcript MGP_LPJ_T0069278.1 MGP_LPJ_G0029067.1 mouse_genomes_project 4 155979007 155986348 + Dnajc11 protein_coding retained_intron MGP_LPJ_T0069279.1 MGP_LPJ_G0029067.1 mouse_genomes_project 4 155979076 155980801 + Dnajc11 protein_coding retained_intron MGP_LPJ_T0069280.1 MGP_LPJ_G0029067.1 mouse_genomes_project 4 155989439 155991192 + Dnajc11 protein_coding retained_intron MGP_LPJ_T0069281.1 MGP_LPJ_G0029067.1 mouse_genomes_project 4 155990198 155991683 + Dnajc11 protein_coding retained_intron MGP_LPJ_T0010657.1 MGP_LPJ_G0008775.1 mouse_genomes_project 4 138058234 138058363 - Gm25317 miRNA miRNA MGP_LPJ_T0099476.1 MGP_LPJ_G0037739.1 mouse_genomes_project 4 39033621 39033728 + Gm25637 snRNA snRNA MGP_LPJ_T0066770.1 MGP_LPJ_G0028486.1 mouse_genomes_project 4 110538515 110580723 - MGP_LPJ_P0066770 4930522H14Rik protein_coding protein_coding MGP_LPJ_T0066771.1 MGP_LPJ_G0028486.1 mouse_genomes_project 4 110538543 110580630 - MGP_LPJ_P0066771 4930522H14Rik protein_coding protein_coding MGP_LPJ_T0099543.1 MGP_LPJ_G0037806.1 mouse_genomes_project 4 152245600 152245708 + Gm23318 snRNA snRNA MGP_LPJ_T0010669.1 MGP_LPJ_G0008787.1 mouse_genomes_project 4 143723352 143723416 + Gm25951 miRNA miRNA MGP_LPJ_T0100804.1 MGP_LPJ_G0039067.1 mouse_genomes_project 4 133056846 133056976 - Gm22660 snoRNA snoRNA MGP_LPJ_T0004546.1 MGP_LPJ_G0003952.1 mouse_genomes_project 4 120554199 120558635 - Gm12927 antisense antisense MGP_LPJ_T0010623.1 MGP_LPJ_G0008741.1 mouse_genomes_project 4 89112870 89112976 - Mir31 miRNA miRNA MGP_LPJ_T0010613.1 MGP_LPJ_G0008731.1 mouse_genomes_project 4 43793254 43793322 - Gm22518 miRNA miRNA MGP_LPJ_T0100778.1 MGP_LPJ_G0039041.1 mouse_genomes_project 4 83004746 83004865 + Gm24884 snoRNA snoRNA MGP_LPJ_T0004565.1 MGP_LPJ_G0003967.1 mouse_genomes_project 4 132328416 132351839 - Gm12963 antisense antisense MGP_LPJ_T0004566.1 MGP_LPJ_G0003967.1 mouse_genomes_project 4 132331023 132351839 - Gm12963 antisense antisense MGP_LPJ_T0004567.1 MGP_LPJ_G0003967.1 mouse_genomes_project 4 132331027 132332632 - Gm12963 antisense antisense MGP_LPJ_T0069130.1 MGP_LPJ_G0029041.1 mouse_genomes_project 4 153091755 153196837 - MGP_LPJ_P0069130 Ube4b protein_coding protein_coding MGP_LPJ_T0069131.1 MGP_LPJ_G0029041.1 mouse_genomes_project 4 153091761 153098456 - MGP_LPJ_P0069131 Ube4b protein_coding nonsense_mediated_decay MGP_LPJ_T0069132.1 MGP_LPJ_G0029041.1 mouse_genomes_project 4 153092835 153095169 - Ube4b protein_coding processed_transcript MGP_LPJ_T0069133.1 MGP_LPJ_G0029041.1 mouse_genomes_project 4 153093012 153195993 - MGP_LPJ_P0069133 Ube4b protein_coding nonsense_mediated_decay MGP_LPJ_T0069134.1 MGP_LPJ_G0029041.1 mouse_genomes_project 4 153093012 153195993 - MGP_LPJ_P0069134 Ube4b protein_coding nonsense_mediated_decay MGP_LPJ_T0069135.1 MGP_LPJ_G0029041.1 mouse_genomes_project 4 153098543 153099450 - Ube4b protein_coding processed_transcript MGP_LPJ_T0069136.1 MGP_LPJ_G0029041.1 mouse_genomes_project 4 153115662 153116640 - Ube4b protein_coding retained_intron MGP_LPJ_T0069137.1 MGP_LPJ_G0029041.1 mouse_genomes_project 4 153131478 153196719 - Ube4b protein_coding retained_intron MGP_LPJ_T0069138.1 MGP_LPJ_G0029041.1 mouse_genomes_project 4 153151089 153196688 - Ube4b protein_coding processed_transcript MGP_LPJ_T0069139.1 MGP_LPJ_G0029041.1 mouse_genomes_project 4 153153073 153153678 - Ube4b protein_coding processed_transcript MGP_LPJ_T0069140.1 MGP_LPJ_G0029041.1 mouse_genomes_project 4 153165532 153196304 - Ube4b protein_coding retained_intron MGP_LPJ_T0069141.1 MGP_LPJ_G0029041.1 mouse_genomes_project 4 153165544 153166409 - Ube4b protein_coding processed_transcript MGP_LPJ_T0066605.1 MGP_LPJ_G0028458.1 mouse_genomes_project 4 108790582 108800156 + MGP_LPJ_P0066605 0610037L13Rik protein_coding protein_coding MGP_LPJ_T0066606.1 MGP_LPJ_G0028458.1 mouse_genomes_project 4 108790594 108797752 + MGP_LPJ_P0066606 0610037L13Rik protein_coding protein_coding MGP_LPJ_T0066607.1 MGP_LPJ_G0028458.1 mouse_genomes_project 4 108790618 108798034 + 0610037L13Rik protein_coding processed_transcript MGP_LPJ_T0066608.1 MGP_LPJ_G0028458.1 mouse_genomes_project 4 108790632 108797890 + MGP_LPJ_P0066608 0610037L13Rik protein_coding protein_coding MGP_LPJ_T0066609.1 MGP_LPJ_G0028458.1 mouse_genomes_project 4 108790635 108796633 + MGP_LPJ_P0066609 0610037L13Rik protein_coding protein_coding MGP_LPJ_T0066610.1 MGP_LPJ_G0028458.1 mouse_genomes_project 4 108790638 108796118 + MGP_LPJ_P0066610 0610037L13Rik protein_coding protein_coding MGP_LPJ_T0066611.1 MGP_LPJ_G0028458.1 mouse_genomes_project 4 108790667 108797890 + MGP_LPJ_P0066611 0610037L13Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0066612.1 MGP_LPJ_G0028458.1 mouse_genomes_project 4 108790668 108798574 + MGP_LPJ_P0066612 0610037L13Rik protein_coding protein_coding MGP_LPJ_T0066613.1 MGP_LPJ_G0028458.1 mouse_genomes_project 4 108790677 108792775 + MGP_LPJ_P0066613 0610037L13Rik protein_coding protein_coding MGP_LPJ_T0066614.1 MGP_LPJ_G0028458.1 mouse_genomes_project 4 108790888 108797936 + 0610037L13Rik protein_coding processed_transcript MGP_LPJ_T0066615.1 MGP_LPJ_G0028458.1 mouse_genomes_project 4 108790996 108797829 + 0610037L13Rik protein_coding processed_transcript MGP_LPJ_T0066616.1 MGP_LPJ_G0028458.1 mouse_genomes_project 4 108791009 108797890 + 0610037L13Rik protein_coding processed_transcript MGP_LPJ_T0066617.1 MGP_LPJ_G0028458.1 mouse_genomes_project 4 108793945 108797825 + 0610037L13Rik protein_coding retained_intron MGP_LPJ_T0066618.1 MGP_LPJ_G0028458.1 mouse_genomes_project 4 108794141 108797890 + MGP_LPJ_P0066618 0610037L13Rik protein_coding protein_coding MGP_LPJ_T0099469.1 MGP_LPJ_G0037732.1 mouse_genomes_project 4 28665393 28665497 - Gm25705 snRNA snRNA MGP_LPJ_T0064707.1 MGP_LPJ_G0028020.1 mouse_genomes_project 4 19512027 19529721 + Fbxl4 protein_coding processed_transcript MGP_LPJ_T0064708.1 MGP_LPJ_G0028020.1 mouse_genomes_project 4 19512027 19589279 + MGP_LPJ_P0064708 Fbxl4 protein_coding protein_coding MGP_LPJ_T0064709.1 MGP_LPJ_G0028020.1 mouse_genomes_project 4 19512044 19589252 + MGP_LPJ_P0064709 Fbxl4 protein_coding nonsense_mediated_decay MGP_LPJ_T0064710.1 MGP_LPJ_G0028020.1 mouse_genomes_project 4 19512055 19589276 + MGP_LPJ_P0064710 Fbxl4 protein_coding nonsense_mediated_decay MGP_LPJ_T0064711.1 MGP_LPJ_G0028020.1 mouse_genomes_project 4 19512100 19589263 + MGP_LPJ_P0064711 Fbxl4 protein_coding nonsense_mediated_decay MGP_LPJ_T0014521.1 MGP_LPJ_G0012612.1 mouse_genomes_project 4 54206663 54207015 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007888.1 MGP_LPJ_G0006450.1 mouse_genomes_project 4 71531904 71561894 + lincRNA lincRNA MGP_LPJ_T0065447.1 MGP_LPJ_G0028174.1 mouse_genomes_project 4 44860196 44874647 + MGP_LPJ_P0065447 Nans protein_coding protein_coding MGP_LPJ_T0065448.1 MGP_LPJ_G0028174.1 mouse_genomes_project 4 44860267 44866085 + Nans protein_coding processed_transcript MGP_LPJ_T0065449.1 MGP_LPJ_G0028174.1 mouse_genomes_project 4 44860322 44870033 + Nans protein_coding processed_transcript MGP_LPJ_T0065450.1 MGP_LPJ_G0028174.1 mouse_genomes_project 4 44860933 44871696 + Nans protein_coding processed_transcript MGP_LPJ_T0100787.1 MGP_LPJ_G0039050.1 mouse_genomes_project 4 106905669 106905782 - Gm26047 snoRNA snoRNA MGP_LPJ_T0099518.1 MGP_LPJ_G0037781.1 mouse_genomes_project 4 120853389 120853496 + Rnu6-ps2 snRNA snRNA MGP_LPJ_T0014640.1 MGP_LPJ_G0012731.1 mouse_genomes_project 4 103796824 103797040 + processed_pseudogene processed_pseudogene MGP_LPJ_T0064911.1 MGP_LPJ_G0028068.1 mouse_genomes_project 4 38677414 38679060 + Dnaja1 protein_coding processed_transcript MGP_LPJ_T0064912.1 MGP_LPJ_G0028068.1 mouse_genomes_project 4 38677744 38691015 + MGP_LPJ_P0064912 Dnaja1 protein_coding protein_coding MGP_LPJ_T0064913.1 MGP_LPJ_G0028068.1 mouse_genomes_project 4 38677823 38685457 + Dnaja1 protein_coding processed_transcript MGP_LPJ_T0064914.1 MGP_LPJ_G0028068.1 mouse_genomes_project 4 38678186 38688797 + Dnaja1 protein_coding processed_transcript MGP_LPJ_T0064915.1 MGP_LPJ_G0028068.1 mouse_genomes_project 4 38678186 38693200 + MGP_LPJ_P0064915 Dnaja1 protein_coding protein_coding MGP_LPJ_T0064916.1 MGP_LPJ_G0028068.1 mouse_genomes_project 4 38678194 38687023 + MGP_LPJ_P0064916 Dnaja1 protein_coding protein_coding MGP_LPJ_T0064917.1 MGP_LPJ_G0028068.1 mouse_genomes_project 4 38678209 38683428 + MGP_LPJ_P0064917 Dnaja1 protein_coding protein_coding MGP_LPJ_T0064918.1 MGP_LPJ_G0028068.1 mouse_genomes_project 4 38678381 38681445 + MGP_LPJ_P0064918 Dnaja1 protein_coding protein_coding MGP_LPJ_T0064919.1 MGP_LPJ_G0028068.1 mouse_genomes_project 4 38678626 38679376 + Dnaja1 protein_coding processed_transcript MGP_LPJ_T0064920.1 MGP_LPJ_G0028068.1 mouse_genomes_project 4 38679313 38687527 + Dnaja1 protein_coding processed_transcript MGP_LPJ_T0100816.1 MGP_LPJ_G0039079.1 mouse_genomes_project 4 158016609 158016741 + Gm25880 snoRNA snoRNA MGP_LPJ_T0007921.1 MGP_LPJ_G0006478.1 mouse_genomes_project 4 101942893 101953658 - E130102H24Rik lincRNA lincRNA MGP_LPJ_T0007922.1 MGP_LPJ_G0006478.1 mouse_genomes_project 4 101953451 101954145 - E130102H24Rik lincRNA lincRNA MGP_LPJ_T0066150.1 MGP_LPJ_G0028359.1 mouse_genomes_project 4 92430539 92433432 - MGP_LPJ_P0066150 Izumo3 protein_coding protein_coding MGP_LPJ_T0066151.1 MGP_LPJ_G0028359.1 mouse_genomes_project 4 92430548 92433445 - MGP_LPJ_P0066151 Izumo3 protein_coding protein_coding MGP_LPJ_T0065747.1 MGP_LPJ_G0028256.1 mouse_genomes_project 4 58948832 58958773 - MGP_LPJ_P0065747 Slc46a2 protein_coding protein_coding MGP_LPJ_T0017976.1 MGP_LPJ_G0015449.1 mouse_genomes_project 4 8751431 8779097 + 1700123M08Rik processed_transcript processed_transcript MGP_LPJ_T0017977.1 MGP_LPJ_G0015449.1 mouse_genomes_project 4 8751440 8778816 + 1700123M08Rik processed_transcript processed_transcript MGP_LPJ_T0017978.1 MGP_LPJ_G0015449.1 mouse_genomes_project 4 8765028 8766520 + 1700123M08Rik processed_transcript processed_transcript MGP_LPJ_T0014358.1 MGP_LPJ_G0012449.1 mouse_genomes_project 4 5546876 5547274 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007984.1 MGP_LPJ_G0006520.1 mouse_genomes_project 4 132261824 132265005 + 1700003M07Rik lincRNA lincRNA MGP_LPJ_T0007985.1 MGP_LPJ_G0006520.1 mouse_genomes_project 4 132262282 132265142 + 1700003M07Rik lincRNA lincRNA MGP_LPJ_T0007811.1 MGP_LPJ_G0006385.1 mouse_genomes_project 4 4176321 4189726 + 8430436N08Rik lincRNA lincRNA MGP_LPJ_T0068431.1 MGP_LPJ_G0028857.1 mouse_genomes_project 4 138240908 138266016 + MGP_LPJ_P0068431 Ifnlr1 protein_coding protein_coding MGP_LPJ_T0100793.1 MGP_LPJ_G0039056.1 mouse_genomes_project 4 119376312 119376416 + Gm23382 snoRNA snoRNA MGP_LPJ_T0014350.1 MGP_LPJ_G0012441.1 mouse_genomes_project 4 2645962 2646716 + processed_pseudogene processed_pseudogene MGP_LPJ_T0064595.1 MGP_LPJ_G0027986.1 mouse_genomes_project 4 8885103 8889947 + MGP_LPJ_P0064595 protein_coding protein_coding MGP_LPJ_T0064596.1 MGP_LPJ_G0027986.1 mouse_genomes_project 4 8885105 8890049 + MGP_LPJ_P0064596 protein_coding protein_coding MGP_LPJ_T0065598.1 MGP_LPJ_G0028216.1 mouse_genomes_project 4 52464838 52517213 + MGP_LPJ_P0065598 Fktn protein_coding protein_coding MGP_LPJ_T0065599.1 MGP_LPJ_G0028216.1 mouse_genomes_project 4 52465003 52514377 + MGP_LPJ_P0065599 Fktn protein_coding nonsense_mediated_decay MGP_LPJ_T0065600.1 MGP_LPJ_G0028216.1 mouse_genomes_project 4 52470845 52514699 + MGP_LPJ_P0065600 Fktn protein_coding protein_coding MGP_LPJ_T0069206.1 MGP_LPJ_G0029056.1 mouse_genomes_project 4 154109654 154120845 + MGP_LPJ_P0069206 protein_coding protein_coding MGP_LPJ_T0069207.1 MGP_LPJ_G0029056.1 mouse_genomes_project 4 154109885 154130557 + MGP_LPJ_P0069207 protein_coding protein_coding MGP_LPJ_T0069208.1 MGP_LPJ_G0029056.1 mouse_genomes_project 4 154110173 154119284 + protein_coding retained_intron MGP_LPJ_T0069209.1 MGP_LPJ_G0029056.1 mouse_genomes_project 4 154110176 154112878 + protein_coding retained_intron MGP_LPJ_T0069210.1 MGP_LPJ_G0029056.1 mouse_genomes_project 4 154110638 154118699 + MGP_LPJ_P0069210 protein_coding protein_coding MGP_LPJ_T0069211.1 MGP_LPJ_G0029056.1 mouse_genomes_project 4 154120041 154130551 + MGP_LPJ_P0069211 protein_coding protein_coding MGP_LPJ_T0069212.1 MGP_LPJ_G0029056.1 mouse_genomes_project 4 154123846 154124985 + protein_coding retained_intron MGP_LPJ_T0069213.1 MGP_LPJ_G0029056.1 mouse_genomes_project 4 154124887 154126866 + protein_coding retained_intron MGP_LPJ_T0069214.1 MGP_LPJ_G0029056.1 mouse_genomes_project 4 154124992 154127208 + protein_coding retained_intron MGP_LPJ_T0065446.1 MGP_LPJ_G0028173.1 mouse_genomes_project 4 44816651 44841297 + MGP_LPJ_P0065446 Anp32b protein_coding protein_coding MGP_LPJ_T0065431.1 MGP_LPJ_G0028168.1 mouse_genomes_project 4 44476839 44511649 + MGP_LPJ_P0065431 Ncbp1 protein_coding protein_coding MGP_LPJ_T0065433.1 MGP_LPJ_G0028168.1 mouse_genomes_project 4 44497152 44499346 + Ncbp1 protein_coding processed_transcript MGP_LPJ_T0065434.1 MGP_LPJ_G0028168.1 mouse_genomes_project 4 44504443 44511225 + Ncbp1 protein_coding processed_transcript MGP_LPJ_T0069571.1 MGP_LPJ_G0029118.1 mouse_genomes_project 4 159747751 159819921 + MGP_LPJ_P0069571 Gnb1 protein_coding protein_coding MGP_LPJ_T0069572.1 MGP_LPJ_G0029118.1 mouse_genomes_project 4 159747754 159819921 + MGP_LPJ_P0069572 Gnb1 protein_coding protein_coding MGP_LPJ_T0069573.1 MGP_LPJ_G0029118.1 mouse_genomes_project 4 159747760 159819921 + MGP_LPJ_P0069573 Gnb1 protein_coding protein_coding MGP_LPJ_T0069574.1 MGP_LPJ_G0029118.1 mouse_genomes_project 4 159749299 159802919 + MGP_LPJ_P0069574 Gnb1 protein_coding protein_coding MGP_LPJ_T0069575.1 MGP_LPJ_G0029118.1 mouse_genomes_project 4 159782457 159815817 + MGP_LPJ_P0069575 Gnb1 protein_coding protein_coding MGP_LPJ_T0069576.1 MGP_LPJ_G0029118.1 mouse_genomes_project 4 159782631 159801056 + Gnb1 protein_coding retained_intron MGP_LPJ_T0069577.1 MGP_LPJ_G0029118.1 mouse_genomes_project 4 159787448 159819919 + MGP_LPJ_P0069577 Gnb1 protein_coding protein_coding MGP_LPJ_T0069578.1 MGP_LPJ_G0029118.1 mouse_genomes_project 4 159802759 159815886 + Gnb1 protein_coding retained_intron MGP_LPJ_T0069579.1 MGP_LPJ_G0029118.1 mouse_genomes_project 4 159813904 159818334 + Gnb1 protein_coding retained_intron MGP_LPJ_T0068951.1 MGP_LPJ_G0028996.1 mouse_genomes_project 4 147882154 147882463 - MGP_LPJ_P0068951 Gm9944 protein_coding protein_coding MGP_LPJ_T0064629.1 MGP_LPJ_G0027997.1 mouse_genomes_project 4 12849770 12877959 - MGP_LPJ_P0064629 Decr1 protein_coding protein_coding MGP_LPJ_T0064630.1 MGP_LPJ_G0027997.1 mouse_genomes_project 4 12865433 12877727 - Decr1 protein_coding processed_transcript MGP_LPJ_T0064631.1 MGP_LPJ_G0027997.1 mouse_genomes_project 4 12876142 12876941 - Decr1 protein_coding processed_transcript MGP_LPJ_T0014704.1 MGP_LPJ_G0012795.1 mouse_genomes_project 4 122671867 122672240 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007809.1 MGP_LPJ_G0006384.1 mouse_genomes_project 4 2200906 2215819 + 4930423M02Rik lincRNA lincRNA MGP_LPJ_T0007810.1 MGP_LPJ_G0006384.1 mouse_genomes_project 4 2200914 2215292 + 4930423M02Rik lincRNA lincRNA MGP_LPJ_T0067610.1 MGP_LPJ_G0028687.1 mouse_genomes_project 4 128186918 128196720 - MGP_LPJ_P0067610 Map7d1 protein_coding protein_coding MGP_LPJ_T0067611.1 MGP_LPJ_G0028687.1 mouse_genomes_project 4 128186918 128213758 - MGP_LPJ_P0067611 Map7d1 protein_coding protein_coding MGP_LPJ_T0067612.1 MGP_LPJ_G0028687.1 mouse_genomes_project 4 128186918 128213764 - MGP_LPJ_P0067612 Map7d1 protein_coding protein_coding MGP_LPJ_T0067613.1 MGP_LPJ_G0028687.1 mouse_genomes_project 4 128186918 128213824 - MGP_LPJ_P0067613 Map7d1 protein_coding protein_coding MGP_LPJ_T0067614.1 MGP_LPJ_G0028687.1 mouse_genomes_project 4 128187714 128188300 - Map7d1 protein_coding retained_intron MGP_LPJ_T0067615.1 MGP_LPJ_G0028687.1 mouse_genomes_project 4 128188371 128189528 - Map7d1 protein_coding retained_intron MGP_LPJ_T0100746.1 MGP_LPJ_G0039009.1 mouse_genomes_project 4 38395397 38395492 - Gm23338 snoRNA snoRNA MGP_LPJ_T0068518.1 MGP_LPJ_G0028878.1 mouse_genomes_project 4 139126527 139207880 + MGP_LPJ_P0068518 Luzp1 protein_coding protein_coding MGP_LPJ_T0068519.1 MGP_LPJ_G0028878.1 mouse_genomes_project 4 139126527 139207876 + MGP_LPJ_P0068519 Luzp1 protein_coding protein_coding MGP_LPJ_T0068520.1 MGP_LPJ_G0028878.1 mouse_genomes_project 4 139126569 139180937 + Luzp1 protein_coding retained_intron MGP_LPJ_T0068521.1 MGP_LPJ_G0028878.1 mouse_genomes_project 4 139126616 139199228 + MGP_LPJ_P0068521 Luzp1 protein_coding protein_coding MGP_LPJ_T0068522.1 MGP_LPJ_G0028878.1 mouse_genomes_project 4 139180621 139204955 + MGP_LPJ_P0068522 Luzp1 protein_coding protein_coding MGP_LPJ_T0068523.1 MGP_LPJ_G0028878.1 mouse_genomes_project 4 139198914 139207879 + MGP_LPJ_P0068523 Luzp1 protein_coding protein_coding MGP_LPJ_T0068524.1 MGP_LPJ_G0028878.1 mouse_genomes_project 4 139203825 139213341 + MGP_LPJ_P0068524 Luzp1 protein_coding protein_coding MGP_LPJ_T0067427.1 MGP_LPJ_G0028639.1 mouse_genomes_project 4 124494379 124517178 + MGP_LPJ_P0067427 Ppt1 protein_coding protein_coding MGP_LPJ_T0067428.1 MGP_LPJ_G0028639.1 mouse_genomes_project 4 124494383 124507106 + MGP_LPJ_P0067428 Ppt1 protein_coding protein_coding MGP_LPJ_T0067429.1 MGP_LPJ_G0028639.1 mouse_genomes_project 4 124494387 124517275 + MGP_LPJ_P0067429 Ppt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0067430.1 MGP_LPJ_G0028639.1 mouse_genomes_project 4 124494391 124508391 + MGP_LPJ_P0067430 Ppt1 protein_coding protein_coding MGP_LPJ_T0014422.1 MGP_LPJ_G0012513.1 mouse_genomes_project 4 23760580 23760797 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014466.1 MGP_LPJ_G0012557.1 mouse_genomes_project 4 37198327 37199088 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014624.1 MGP_LPJ_G0012715.1 mouse_genomes_project 4 98828178 98828492 + processed_pseudogene processed_pseudogene MGP_LPJ_T0065261.1 MGP_LPJ_G0028133.1 mouse_genomes_project 4 41855992 41872850 + protein_coding processed_transcript MGP_LPJ_T0065262.1 MGP_LPJ_G0028133.1 mouse_genomes_project 4 41856056 41879078 + MGP_LPJ_P0065262 protein_coding protein_coding MGP_LPJ_T0065263.1 MGP_LPJ_G0028133.1 mouse_genomes_project 4 41856290 41872053 + MGP_LPJ_P0065263 protein_coding protein_coding MGP_LPJ_T0065264.1 MGP_LPJ_G0028133.1 mouse_genomes_project 4 41856351 41867749 + protein_coding processed_transcript MGP_LPJ_T0065265.1 MGP_LPJ_G0028133.1 mouse_genomes_project 4 41860896 41872642 + protein_coding processed_transcript MGP_LPJ_T0065266.1 MGP_LPJ_G0028133.1 mouse_genomes_project 4 41876125 41876932 + protein_coding processed_transcript MGP_LPJ_T0010595.1 MGP_LPJ_G0008713.1 mouse_genomes_project 4 12875352 12875444 - Mir6400 miRNA miRNA MGP_LPJ_T0069160.1 MGP_LPJ_G0029047.1 mouse_genomes_project 4 153453180 153510819 - MGP_LPJ_P0069160 Pik3cd protein_coding protein_coding MGP_LPJ_T0069161.1 MGP_LPJ_G0029047.1 mouse_genomes_project 4 153453180 153510829 - MGP_LPJ_P0069161 Pik3cd protein_coding protein_coding MGP_LPJ_T0069162.1 MGP_LPJ_G0029047.1 mouse_genomes_project 4 153453182 153513706 - MGP_LPJ_P0069162 Pik3cd protein_coding protein_coding MGP_LPJ_T0069163.1 MGP_LPJ_G0029047.1 mouse_genomes_project 4 153453182 153481431 - MGP_LPJ_P0069163 Pik3cd protein_coding protein_coding MGP_LPJ_T0069164.1 MGP_LPJ_G0029047.1 mouse_genomes_project 4 153453183 153483281 - MGP_LPJ_P0069164 Pik3cd protein_coding protein_coding MGP_LPJ_T0069165.1 MGP_LPJ_G0029047.1 mouse_genomes_project 4 153453829 153510726 - MGP_LPJ_P0069165 Pik3cd protein_coding protein_coding MGP_LPJ_T0069166.1 MGP_LPJ_G0029047.1 mouse_genomes_project 4 153454652 153469064 - MGP_LPJ_P0069166 Pik3cd protein_coding protein_coding MGP_LPJ_T0069167.1 MGP_LPJ_G0029047.1 mouse_genomes_project 4 153463745 153482423 - MGP_LPJ_P0069167 Pik3cd protein_coding protein_coding MGP_LPJ_T0069168.1 MGP_LPJ_G0029047.1 mouse_genomes_project 4 153463824 153482862 - MGP_LPJ_P0069168 Pik3cd protein_coding protein_coding MGP_LPJ_T0069169.1 MGP_LPJ_G0029047.1 mouse_genomes_project 4 153463986 153510725 - MGP_LPJ_P0069169 Pik3cd protein_coding protein_coding MGP_LPJ_T0069170.1 MGP_LPJ_G0029047.1 mouse_genomes_project 4 153464151 153510673 - MGP_LPJ_P0069170 Pik3cd protein_coding protein_coding MGP_LPJ_T0069171.1 MGP_LPJ_G0029047.1 mouse_genomes_project 4 153468932 153514691 - MGP_LPJ_P0069171 Pik3cd protein_coding protein_coding MGP_LPJ_T0069172.1 MGP_LPJ_G0029047.1 mouse_genomes_project 4 153480675 153483330 - Pik3cd protein_coding processed_transcript MGP_LPJ_T0069173.1 MGP_LPJ_G0029047.1 mouse_genomes_project 4 153481001 153513706 - Pik3cd protein_coding processed_transcript MGP_LPJ_T0007911.1 MGP_LPJ_G0006469.1 mouse_genomes_project 4 95466429 95468768 - 4930551L18Rik lincRNA lincRNA MGP_LPJ_T0010668.1 MGP_LPJ_G0008786.1 mouse_genomes_project 4 143690945 143691041 + Gm23045 miRNA miRNA MGP_LPJ_T0007927.1 MGP_LPJ_G0006482.1 mouse_genomes_project 4 104068238 104177069 + Gm12718 lincRNA lincRNA MGP_LPJ_T0007928.1 MGP_LPJ_G0006482.1 mouse_genomes_project 4 104068259 104177051 + Gm12718 lincRNA lincRNA MGP_LPJ_T0065364.1 MGP_LPJ_G0028153.1 mouse_genomes_project 4 43300289 43351475 - MGP_LPJ_P0065364 Fbxo10 protein_coding protein_coding MGP_LPJ_T0065365.1 MGP_LPJ_G0028153.1 mouse_genomes_project 4 43300290 43329273 - MGP_LPJ_P0065365 Fbxo10 protein_coding protein_coding MGP_LPJ_T0065366.1 MGP_LPJ_G0028153.1 mouse_genomes_project 4 43313556 43325887 - Fbxo10 protein_coding processed_transcript MGP_LPJ_T0014575.1 MGP_LPJ_G0012666.1 mouse_genomes_project 4 79730304 79730707 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007989.1 MGP_LPJ_G0006524.1 mouse_genomes_project 4 133215988 133221071 - A930031H19Rik lincRNA lincRNA MGP_LPJ_T0007990.1 MGP_LPJ_G0006524.1 mouse_genomes_project 4 133215988 133227154 - A930031H19Rik lincRNA lincRNA MGP_LPJ_T0069543.1 MGP_LPJ_G0029114.1 mouse_genomes_project 4 159494508 159605044 - MGP_LPJ_P0069543 Prkcz protein_coding protein_coding MGP_LPJ_T0069544.1 MGP_LPJ_G0029114.1 mouse_genomes_project 4 159497503 159604126 - MGP_LPJ_P0069544 Prkcz protein_coding protein_coding MGP_LPJ_T0069545.1 MGP_LPJ_G0029114.1 mouse_genomes_project 4 159497537 159503773 - Prkcz protein_coding processed_transcript MGP_LPJ_T0069546.1 MGP_LPJ_G0029114.1 mouse_genomes_project 4 159506570 159509365 - Prkcz protein_coding processed_transcript MGP_LPJ_T0069547.1 MGP_LPJ_G0029114.1 mouse_genomes_project 4 159526390 159585186 - MGP_LPJ_P0069547 Prkcz protein_coding protein_coding MGP_LPJ_T0069548.1 MGP_LPJ_G0029114.1 mouse_genomes_project 4 159526390 159584969 - MGP_LPJ_P0069548 Prkcz protein_coding protein_coding MGP_LPJ_T0069549.1 MGP_LPJ_G0029114.1 mouse_genomes_project 4 159526393 159585066 - Prkcz protein_coding processed_transcript MGP_LPJ_T0069550.1 MGP_LPJ_G0029114.1 mouse_genomes_project 4 159531444 159540157 - Prkcz protein_coding processed_transcript MGP_LPJ_T0069551.1 MGP_LPJ_G0029114.1 mouse_genomes_project 4 159531519 159584544 - Prkcz protein_coding processed_transcript MGP_LPJ_T0069552.1 MGP_LPJ_G0029114.1 mouse_genomes_project 4 159598084 159605023 - MGP_LPJ_P0069552 Prkcz protein_coding protein_coding MGP_LPJ_T0014345.1 MGP_LPJ_G0012436.1 mouse_genomes_project 4 518175 518675 - processed_pseudogene processed_pseudogene MGP_LPJ_T0069394.1 MGP_LPJ_G0029088.1 mouse_genomes_project 4 158105365 158110054 + MGP_LPJ_P0069394 A430005L14Rik protein_coding protein_coding MGP_LPJ_T0069395.1 MGP_LPJ_G0029088.1 mouse_genomes_project 4 158105365 158110047 + MGP_LPJ_P0069395 A430005L14Rik protein_coding protein_coding MGP_LPJ_T0069396.1 MGP_LPJ_G0029088.1 mouse_genomes_project 4 158105383 158108195 + A430005L14Rik protein_coding retained_intron MGP_LPJ_T0069397.1 MGP_LPJ_G0029088.1 mouse_genomes_project 4 158105394 158109640 + MGP_LPJ_P0069397 A430005L14Rik protein_coding protein_coding MGP_LPJ_T0069398.1 MGP_LPJ_G0029088.1 mouse_genomes_project 4 158105394 158109932 + MGP_LPJ_P0069398 A430005L14Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0069399.1 MGP_LPJ_G0029088.1 mouse_genomes_project 4 158105457 158108863 + A430005L14Rik protein_coding processed_transcript MGP_LPJ_T0069400.1 MGP_LPJ_G0029088.1 mouse_genomes_project 4 158107920 158109218 + A430005L14Rik protein_coding retained_intron MGP_LPJ_T0066974.1 MGP_LPJ_G0028535.1 mouse_genomes_project 4 117248021 117248940 + MGP_LPJ_P0066974 1700042G07Rik protein_coding protein_coding MGP_LPJ_T0014353.1 MGP_LPJ_G0012444.1 mouse_genomes_project 4 3119355 3120101 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014347.1 MGP_LPJ_G0012438.1 mouse_genomes_project 4 1521825 1522193 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014683.1 MGP_LPJ_G0012774.1 mouse_genomes_project 4 118678831 118679210 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014394.1 MGP_LPJ_G0012485.1 mouse_genomes_project 4 15475624 15476070 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018014.1 MGP_LPJ_G0015474.1 mouse_genomes_project 4 95404630 95423501 - Gm12703 processed_transcript processed_transcript MGP_LPJ_T0011593.1 MGP_LPJ_G0009711.1 mouse_genomes_project 4 115955994 115956092 + Gm24045 misc_RNA misc_RNA MGP_LPJ_T0066603.1 MGP_LPJ_G0028457.1 mouse_genomes_project 4 108780498 108788194 + MGP_LPJ_P0066603 Magoh protein_coding protein_coding MGP_LPJ_T0066604.1 MGP_LPJ_G0028457.1 mouse_genomes_project 4 108783769 108788157 + Magoh protein_coding processed_transcript MGP_LPJ_T0066978.1 MGP_LPJ_G0028537.1 mouse_genomes_project 4 117387453 117554347 - MGP_LPJ_P0066978 Mast2 protein_coding protein_coding MGP_LPJ_T0066979.1 MGP_LPJ_G0028537.1 mouse_genomes_project 4 117387454 117554774 - MGP_LPJ_P0066979 Mast2 protein_coding protein_coding MGP_LPJ_T0066980.1 MGP_LPJ_G0028537.1 mouse_genomes_project 4 117387454 117554774 - MGP_LPJ_P0066980 Mast2 protein_coding protein_coding MGP_LPJ_T0066981.1 MGP_LPJ_G0028537.1 mouse_genomes_project 4 117387506 117554511 - MGP_LPJ_P0066981 Mast2 protein_coding protein_coding MGP_LPJ_T0066982.1 MGP_LPJ_G0028537.1 mouse_genomes_project 4 117388699 117389897 - Mast2 protein_coding processed_transcript MGP_LPJ_T0066983.1 MGP_LPJ_G0028537.1 mouse_genomes_project 4 117390271 117391493 - Mast2 protein_coding processed_transcript MGP_LPJ_T0066984.1 MGP_LPJ_G0028537.1 mouse_genomes_project 4 117390303 117391340 - Mast2 protein_coding processed_transcript MGP_LPJ_T0066985.1 MGP_LPJ_G0028537.1 mouse_genomes_project 4 117392982 117396768 - Mast2 protein_coding processed_transcript MGP_LPJ_T0066986.1 MGP_LPJ_G0028537.1 mouse_genomes_project 4 117393544 117398452 - Mast2 protein_coding processed_transcript MGP_LPJ_T0066987.1 MGP_LPJ_G0028537.1 mouse_genomes_project 4 117398411 117409245 - Mast2 protein_coding processed_transcript MGP_LPJ_T0066988.1 MGP_LPJ_G0028537.1 mouse_genomes_project 4 117400540 117412107 - Mast2 protein_coding processed_transcript MGP_LPJ_T0066989.1 MGP_LPJ_G0028537.1 mouse_genomes_project 4 117403125 117489044 - MGP_LPJ_P0066989 Mast2 protein_coding protein_coding MGP_LPJ_T0066990.1 MGP_LPJ_G0028537.1 mouse_genomes_project 4 117409065 117489060 - MGP_LPJ_P0066990 Mast2 protein_coding protein_coding MGP_LPJ_T0066991.1 MGP_LPJ_G0028537.1 mouse_genomes_project 4 117414354 117489865 - Mast2 protein_coding processed_transcript MGP_LPJ_T0066992.1 MGP_LPJ_G0028537.1 mouse_genomes_project 4 117414643 117525162 - Mast2 protein_coding processed_transcript MGP_LPJ_T0014399.1 MGP_LPJ_G0012490.1 mouse_genomes_project 4 16348963 16349815 + processed_pseudogene processed_pseudogene MGP_LPJ_T0069282.1 MGP_LPJ_G0029068.1 mouse_genomes_project 4 155993094 155999439 - MGP_LPJ_P0069282 Thap3 protein_coding protein_coding MGP_LPJ_T0069283.1 MGP_LPJ_G0029068.1 mouse_genomes_project 4 155993257 155999412 - MGP_LPJ_P0069283 Thap3 protein_coding protein_coding MGP_LPJ_T0069284.1 MGP_LPJ_G0029068.1 mouse_genomes_project 4 155995914 155999422 - Thap3 protein_coding retained_intron MGP_LPJ_T0014723.1 MGP_LPJ_G0012814.1 mouse_genomes_project 4 128786763 128787749 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014490.1 MGP_LPJ_G0012581.1 mouse_genomes_project 4 45890198 45892970 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014754.1 MGP_LPJ_G0012845.1 mouse_genomes_project 4 139270002 139270828 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014693.1 MGP_LPJ_G0012784.1 mouse_genomes_project 4 120256707 120257713 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004637.1 MGP_LPJ_G0004022.1 mouse_genomes_project 4 159255443 159258825 + Gm10564 antisense antisense MGP_LPJ_T0014418.1 MGP_LPJ_G0012509.1 mouse_genomes_project 4 22775735 22776554 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014419.1 MGP_LPJ_G0012510.1 mouse_genomes_project 4 23092397 23092772 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102147.1 MGP_LPJ_G0040184.1 mouse_genomes_project 4 96773982 96800600 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0067399.1 MGP_LPJ_G0028627.1 mouse_genomes_project 4 122274313 122304037 + Rims3 protein_coding processed_transcript MGP_LPJ_T0067400.1 MGP_LPJ_G0028627.1 mouse_genomes_project 4 122274316 122316679 + MGP_LPJ_P0067400 Rims3 protein_coding protein_coding MGP_LPJ_T0067401.1 MGP_LPJ_G0028627.1 mouse_genomes_project 4 122281805 122316679 + MGP_LPJ_P0067401 Rims3 protein_coding protein_coding MGP_LPJ_T0067402.1 MGP_LPJ_G0028627.1 mouse_genomes_project 4 122297457 122311660 + MGP_LPJ_P0067402 Rims3 protein_coding protein_coding MGP_LPJ_T0067092.1 MGP_LPJ_G0028557.1 mouse_genomes_project 4 118264575 118266118 + MGP_LPJ_P0067092 Tctex1d4 protein_coding protein_coding MGP_LPJ_T0067093.1 MGP_LPJ_G0028557.1 mouse_genomes_project 4 118264594 118266520 + MGP_LPJ_P0067093 Tctex1d4 protein_coding protein_coding MGP_LPJ_T0067094.1 MGP_LPJ_G0028557.1 mouse_genomes_project 4 118264955 118266297 + MGP_LPJ_P0067094 Tctex1d4 protein_coding protein_coding MGP_LPJ_T0004509.1 MGP_LPJ_G0003922.1 mouse_genomes_project 4 99300996 99307572 + Kank4os antisense antisense MGP_LPJ_T0014762.1 MGP_LPJ_G0012853.1 mouse_genomes_project 4 146371680 146372145 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011584.1 MGP_LPJ_G0009702.1 mouse_genomes_project 4 69923114 69923420 - Gm26320 misc_RNA misc_RNA MGP_LPJ_T0069459.1 MGP_LPJ_G0029099.1 mouse_genomes_project 4 158494869 158838190 - Prdm16 protein_coding processed_transcript MGP_LPJ_T0069460.1 MGP_LPJ_G0029099.1 mouse_genomes_project 4 158494869 158838190 - MGP_LPJ_P0069460 Prdm16 protein_coding protein_coding MGP_LPJ_T0069461.1 MGP_LPJ_G0029099.1 mouse_genomes_project 4 158494869 158838190 - MGP_LPJ_P0069461 Prdm16 protein_coding protein_coding MGP_LPJ_T0069462.1 MGP_LPJ_G0029099.1 mouse_genomes_project 4 158494869 158838190 - MGP_LPJ_P0069462 Prdm16 protein_coding protein_coding MGP_LPJ_T0069463.1 MGP_LPJ_G0029099.1 mouse_genomes_project 4 158494869 158838190 - MGP_LPJ_P0069463 Prdm16 protein_coding protein_coding MGP_LPJ_T0069464.1 MGP_LPJ_G0029099.1 mouse_genomes_project 4 158494869 158838190 - MGP_LPJ_P0069464 Prdm16 protein_coding protein_coding MGP_LPJ_T0069465.1 MGP_LPJ_G0029099.1 mouse_genomes_project 4 158494869 158838190 - MGP_LPJ_P0069465 Prdm16 protein_coding protein_coding MGP_LPJ_T0069466.1 MGP_LPJ_G0029099.1 mouse_genomes_project 4 158502081 158517825 - Prdm16 protein_coding processed_transcript MGP_LPJ_T0069467.1 MGP_LPJ_G0029099.1 mouse_genomes_project 4 158511232 158517895 - Prdm16 protein_coding processed_transcript MGP_LPJ_T0069469.1 MGP_LPJ_G0029099.1 mouse_genomes_project 4 158531902 158534221 - Prdm16 protein_coding processed_transcript MGP_LPJ_T0069470.1 MGP_LPJ_G0029099.1 mouse_genomes_project 4 158541007 158838197 - MGP_LPJ_P0069470 Prdm16 protein_coding protein_coding MGP_LPJ_T0069471.1 MGP_LPJ_G0029099.1 mouse_genomes_project 4 158668594 158725999 - Prdm16 protein_coding processed_transcript MGP_LPJ_T0069472.1 MGP_LPJ_G0029099.1 mouse_genomes_project 4 158668625 158838121 - Prdm16 protein_coding processed_transcript MGP_LPJ_T0007870.1 MGP_LPJ_G0006434.1 mouse_genomes_project 4 54787714 54813451 - Gm12519 lincRNA lincRNA MGP_LPJ_T0067253.1 MGP_LPJ_G0028588.1 mouse_genomes_project 4 119926977 119927925 + MGP_LPJ_P0067253 Olfr62 protein_coding protein_coding MGP_LPJ_T0014407.1 MGP_LPJ_G0012498.1 mouse_genomes_project 4 19419553 19420059 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014605.1 MGP_LPJ_G0012696.1 mouse_genomes_project 4 91446622 91447234 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098036.1 MGP_LPJ_G0036317.1 mouse_genomes_project 4 125684678 125686188 - pseudogene pseudogene MGP_LPJ_T0014388.1 MGP_LPJ_G0012479.1 mouse_genomes_project 4 13664712 13665371 + processed_pseudogene processed_pseudogene MGP_LPJ_T0065584.1 MGP_LPJ_G0028214.1 mouse_genomes_project 4 52182866 52297788 + MGP_LPJ_P0065584 Slc44a1 protein_coding protein_coding MGP_LPJ_T0065585.1 MGP_LPJ_G0028214.1 mouse_genomes_project 4 52182866 52371590 + MGP_LPJ_P0065585 Slc44a1 protein_coding protein_coding MGP_LPJ_T0065586.1 MGP_LPJ_G0028214.1 mouse_genomes_project 4 52183124 52274882 + Slc44a1 protein_coding processed_transcript MGP_LPJ_T0065587.1 MGP_LPJ_G0028214.1 mouse_genomes_project 4 52183137 52317588 + MGP_LPJ_P0065587 Slc44a1 protein_coding protein_coding MGP_LPJ_T0065588.1 MGP_LPJ_G0028214.1 mouse_genomes_project 4 52183137 52313230 + MGP_LPJ_P0065588 Slc44a1 protein_coding protein_coding MGP_LPJ_T0065589.1 MGP_LPJ_G0028214.1 mouse_genomes_project 4 52345862 52371099 + Slc44a1 protein_coding processed_transcript MGP_LPJ_T0098379.1 MGP_LPJ_G0036660.1 mouse_genomes_project 4 50472183 50472616 + Gm24943 ribozyme ribozyme MGP_LPJ_T0069533.1 MGP_LPJ_G0029113.1 mouse_genomes_project 4 159480957 159487558 + Faap20 protein_coding processed_transcript MGP_LPJ_T0069534.1 MGP_LPJ_G0029113.1 mouse_genomes_project 4 159481016 159482094 + Faap20 protein_coding processed_transcript MGP_LPJ_T0069535.1 MGP_LPJ_G0029113.1 mouse_genomes_project 4 159481032 159481952 + Faap20 protein_coding processed_transcript MGP_LPJ_T0069536.1 MGP_LPJ_G0029113.1 mouse_genomes_project 4 159481052 159487602 + Faap20 protein_coding processed_transcript MGP_LPJ_T0069537.1 MGP_LPJ_G0029113.1 mouse_genomes_project 4 159481119 159487826 + MGP_LPJ_P0069537 Faap20 protein_coding protein_coding MGP_LPJ_T0069538.1 MGP_LPJ_G0029113.1 mouse_genomes_project 4 159481119 159487822 + MGP_LPJ_P0069538 Faap20 protein_coding nonsense_mediated_decay MGP_LPJ_T0069539.1 MGP_LPJ_G0029113.1 mouse_genomes_project 4 159481142 159487522 + MGP_LPJ_P0069539 Faap20 protein_coding protein_coding MGP_LPJ_T0069540.1 MGP_LPJ_G0029113.1 mouse_genomes_project 4 159481156 159487823 + MGP_LPJ_P0069540 Faap20 protein_coding protein_coding MGP_LPJ_T0069541.1 MGP_LPJ_G0029113.1 mouse_genomes_project 4 159481473 159487557 + MGP_LPJ_P0069541 Faap20 protein_coding protein_coding MGP_LPJ_T0069542.1 MGP_LPJ_G0029113.1 mouse_genomes_project 4 159481837 159487587 + Faap20 protein_coding retained_intron MGP_LPJ_T0004483.1 MGP_LPJ_G0003906.1 mouse_genomes_project 4 58933695 58938632 - Gm12542 antisense antisense MGP_LPJ_T0065280.1 MGP_LPJ_G0028142.1 mouse_genomes_project 4 42170277 42195423 + MGP_LPJ_P0065280 Glipr2 protein_coding protein_coding MGP_LPJ_T0065281.1 MGP_LPJ_G0028142.1 mouse_genomes_project 4 42170568 42195423 + MGP_LPJ_P0065281 Glipr2 protein_coding protein_coding MGP_LPJ_T0018055.1 MGP_LPJ_G0015496.1 mouse_genomes_project 4 136427366 136429744 + Gm13061 processed_transcript processed_transcript MGP_LPJ_T0069005.1 MGP_LPJ_G0029014.1 mouse_genomes_project 4 151571661 151577984 + MGP_LPJ_P0069005 2510039O18Rik protein_coding protein_coding MGP_LPJ_T0069588.1 MGP_LPJ_G0029120.1 mouse_genomes_project 4 159866098 159889451 + MGP_LPJ_P0069588 Slc35e2 protein_coding protein_coding MGP_LPJ_T0069589.1 MGP_LPJ_G0029120.1 mouse_genomes_project 4 159866293 159886029 + MGP_LPJ_P0069589 Slc35e2 protein_coding protein_coding MGP_LPJ_T0069590.1 MGP_LPJ_G0029120.1 mouse_genomes_project 4 159866625 159885258 + MGP_LPJ_P0069590 Slc35e2 protein_coding protein_coding MGP_LPJ_T0069591.1 MGP_LPJ_G0029120.1 mouse_genomes_project 4 159876345 159885135 + Slc35e2 protein_coding processed_transcript MGP_LPJ_T0018023.1 MGP_LPJ_G0015482.1 mouse_genomes_project 4 110612199 110701150 + Gm12811 processed_transcript processed_transcript MGP_LPJ_T0014629.1 MGP_LPJ_G0012720.1 mouse_genomes_project 4 99986045 99987044 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010660.1 MGP_LPJ_G0008778.1 mouse_genomes_project 4 139875426 139875502 + Gm23263 miRNA miRNA MGP_LPJ_T0067655.1 MGP_LPJ_G0028699.1 mouse_genomes_project 4 128733173 128743628 - MGP_LPJ_P0067655 Ncdn protein_coding protein_coding MGP_LPJ_T0067656.1 MGP_LPJ_G0028699.1 mouse_genomes_project 4 128734154 128743657 - Ncdn protein_coding processed_transcript MGP_LPJ_T0067657.1 MGP_LPJ_G0028699.1 mouse_genomes_project 4 128734154 128743646 - MGP_LPJ_P0067657 Ncdn protein_coding protein_coding MGP_LPJ_T0001451.1 MGP_LPJ_G0001369.1 mouse_genomes_project 4 126093918 126095152 - TEC TEC MGP_LPJ_T0064625.1 MGP_LPJ_G0027995.1 mouse_genomes_project 4 12199110 12220247 + MGP_LPJ_P0064625 Tmem64 protein_coding protein_coding MGP_LPJ_T0008038.1 MGP_LPJ_G0006561.1 mouse_genomes_project 4 153599648 153600336 - Gm13073 lincRNA lincRNA MGP_LPJ_T0066127.1 MGP_LPJ_G0028352.1 mouse_genomes_project 4 89079663 89080327 - MGP_LPJ_P0066127 Ifne protein_coding protein_coding MGP_LPJ_T0064617.1 MGP_LPJ_G0027991.1 mouse_genomes_project 4 11530129 11706327 - MGP_LPJ_P0064617 Lrrc69 protein_coding protein_coding MGP_LPJ_T0064618.1 MGP_LPJ_G0027991.1 mouse_genomes_project 4 11567964 11665334 - Lrrc69 protein_coding processed_transcript MGP_LPJ_T0064619.1 MGP_LPJ_G0027991.1 mouse_genomes_project 4 11567964 11706319 - MGP_LPJ_P0064619 Lrrc69 protein_coding protein_coding MGP_LPJ_T0064467.1 MGP_LPJ_G0027962.1 mouse_genomes_project 4 2961236 3021193 - Nsmaf protein_coding retained_intron MGP_LPJ_T0064468.1 MGP_LPJ_G0027962.1 mouse_genomes_project 4 2961236 3021193 - MGP_LPJ_P0064468 Nsmaf protein_coding protein_coding MGP_LPJ_T0064469.1 MGP_LPJ_G0027962.1 mouse_genomes_project 4 2961440 2964036 - Nsmaf protein_coding retained_intron MGP_LPJ_T0064470.1 MGP_LPJ_G0027962.1 mouse_genomes_project 4 2961798 3021018 - Nsmaf protein_coding processed_transcript MGP_LPJ_T0064471.1 MGP_LPJ_G0027962.1 mouse_genomes_project 4 2971419 3021177 - Nsmaf protein_coding processed_transcript MGP_LPJ_T0064472.1 MGP_LPJ_G0027962.1 mouse_genomes_project 4 2974038 2989967 - Nsmaf protein_coding retained_intron MGP_LPJ_T0064473.1 MGP_LPJ_G0027962.1 mouse_genomes_project 4 2990548 2998907 - Nsmaf protein_coding retained_intron MGP_LPJ_T0064474.1 MGP_LPJ_G0027962.1 mouse_genomes_project 4 2994428 3020501 - Nsmaf protein_coding processed_transcript MGP_LPJ_T0064475.1 MGP_LPJ_G0027962.1 mouse_genomes_project 4 2995707 3013652 - Nsmaf protein_coding processed_transcript MGP_LPJ_T0064476.1 MGP_LPJ_G0027962.1 mouse_genomes_project 4 2999480 3021019 - MGP_LPJ_P0064476 Nsmaf protein_coding protein_coding MGP_LPJ_T0064477.1 MGP_LPJ_G0027962.1 mouse_genomes_project 4 3004121 3011718 - Nsmaf protein_coding processed_transcript MGP_LPJ_T0064580.1 MGP_LPJ_G0027982.1 mouse_genomes_project 4 8523908 8588485 + MGP_LPJ_P0064580 Cdh17 protein_coding protein_coding MGP_LPJ_T0064581.1 MGP_LPJ_G0027982.1 mouse_genomes_project 4 8523954 8582076 + MGP_LPJ_P0064581 Cdh17 protein_coding protein_coding MGP_LPJ_T0014577.1 MGP_LPJ_G0012668.1 mouse_genomes_project 4 79862823 79863336 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001435.1 MGP_LPJ_G0001354.1 mouse_genomes_project 4 5039092 5045028 - TEC TEC MGP_LPJ_T0069566.1 MGP_LPJ_G0029117.1 mouse_genomes_project 4 159725088 159726390 + Tmem52 protein_coding retained_intron MGP_LPJ_T0069567.1 MGP_LPJ_G0029117.1 mouse_genomes_project 4 159725088 159726833 + MGP_LPJ_P0069567 Tmem52 protein_coding protein_coding MGP_LPJ_T0069568.1 MGP_LPJ_G0029117.1 mouse_genomes_project 4 159725088 159726833 + MGP_LPJ_P0069568 Tmem52 protein_coding protein_coding MGP_LPJ_T0069569.1 MGP_LPJ_G0029117.1 mouse_genomes_project 4 159725105 159726832 + MGP_LPJ_P0069569 Tmem52 protein_coding protein_coding MGP_LPJ_T0069570.1 MGP_LPJ_G0029117.1 mouse_genomes_project 4 159725121 159726764 + Tmem52 protein_coding retained_intron MGP_LPJ_T0067537.1 MGP_LPJ_G0028669.1 mouse_genomes_project 4 126708576 126715501 - MGP_LPJ_P0067537 Maneal protein_coding protein_coding MGP_LPJ_T0067068.1 MGP_LPJ_G0028553.1 mouse_genomes_project 4 118125048 118136186 + MGP_LPJ_P0067068 Hectd3 protein_coding protein_coding MGP_LPJ_T0067069.1 MGP_LPJ_G0028553.1 mouse_genomes_project 4 118129422 118131158 + Hectd3 protein_coding retained_intron MGP_LPJ_T0067070.1 MGP_LPJ_G0028553.1 mouse_genomes_project 4 118133764 118134358 + Hectd3 protein_coding retained_intron MGP_LPJ_T0014594.1 MGP_LPJ_G0012685.1 mouse_genomes_project 4 88244683 88244921 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007869.1 MGP_LPJ_G0006433.1 mouse_genomes_project 4 54410664 54444891 + Gm12506 lincRNA lincRNA MGP_LPJ_T0065936.1 MGP_LPJ_G0028308.1 mouse_genomes_project 4 79863416 79864560 + MGP_LPJ_P0065936 protein_coding protein_coding MGP_LPJ_T0004537.1 MGP_LPJ_G0003944.1 mouse_genomes_project 4 118450246 118452155 + Gm12843 antisense antisense MGP_LPJ_T0004538.1 MGP_LPJ_G0003944.1 mouse_genomes_project 4 118450573 118451803 + Gm12843 antisense antisense MGP_LPJ_T0066582.1 MGP_LPJ_G0028454.1 mouse_genomes_project 4 108331284 108332730 + Glis1 protein_coding processed_transcript MGP_LPJ_T0066583.1 MGP_LPJ_G0028454.1 mouse_genomes_project 4 108331310 108457820 + MGP_LPJ_P0066583 Glis1 protein_coding protein_coding MGP_LPJ_T0066584.1 MGP_LPJ_G0028454.1 mouse_genomes_project 4 108331412 108531024 + MGP_LPJ_P0066584 Glis1 protein_coding protein_coding MGP_LPJ_T0066585.1 MGP_LPJ_G0028454.1 mouse_genomes_project 4 108335691 108531024 + MGP_LPJ_P0066585 Glis1 protein_coding protein_coding MGP_LPJ_T0066586.1 MGP_LPJ_G0028454.1 mouse_genomes_project 4 108476111 108523408 + Glis1 protein_coding processed_transcript MGP_LPJ_T0066587.1 MGP_LPJ_G0028454.1 mouse_genomes_project 4 108510938 108528329 + Glis1 protein_coding processed_transcript MGP_LPJ_T0069153.1 MGP_LPJ_G0029045.1 mouse_genomes_project 4 153288372 153342318 + MGP_LPJ_P0069153 Ctnnbip1 protein_coding protein_coding MGP_LPJ_T0069154.1 MGP_LPJ_G0029045.1 mouse_genomes_project 4 153319473 153340389 + MGP_LPJ_P0069154 Ctnnbip1 protein_coding protein_coding MGP_LPJ_T0014781.1 MGP_LPJ_G0012872.1 mouse_genomes_project 4 153633517 153634074 - processed_pseudogene processed_pseudogene MGP_LPJ_T0066030.1 MGP_LPJ_G0028321.1 mouse_genomes_project 4 84890493 85156209 + MGP_LPJ_P0066030 Cntln protein_coding protein_coding MGP_LPJ_T0066031.1 MGP_LPJ_G0028321.1 mouse_genomes_project 4 84890588 84970974 + MGP_LPJ_P0066031 Cntln protein_coding protein_coding MGP_LPJ_T0066032.1 MGP_LPJ_G0028321.1 mouse_genomes_project 4 84890649 85156205 + MGP_LPJ_P0066032 Cntln protein_coding protein_coding MGP_LPJ_T0066033.1 MGP_LPJ_G0028321.1 mouse_genomes_project 4 85120520 85156206 + MGP_LPJ_P0066033 Cntln protein_coding protein_coding MGP_LPJ_T0014351.1 MGP_LPJ_G0012442.1 mouse_genomes_project 4 2821215 2822090 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065238.1 MGP_LPJ_G0028128.1 mouse_genomes_project 4 41761729 41763008 - MGP_LPJ_P0065238 Msmp protein_coding protein_coding MGP_LPJ_T0014722.1 MGP_LPJ_G0012813.1 mouse_genomes_project 4 128560802 128561103 - processed_pseudogene processed_pseudogene MGP_LPJ_T0068787.1 MGP_LPJ_G0028945.1 mouse_genomes_project 4 144034857 144040271 + MGP_LPJ_P0068787 Mfap2 protein_coding protein_coding MGP_LPJ_T0068788.1 MGP_LPJ_G0028945.1 mouse_genomes_project 4 144035073 144039469 + Mfap2 protein_coding processed_transcript MGP_LPJ_T0068789.1 MGP_LPJ_G0028945.1 mouse_genomes_project 4 144035080 144040441 + MGP_LPJ_P0068789 Mfap2 protein_coding protein_coding MGP_LPJ_T0065659.1 MGP_LPJ_G0028233.1 mouse_genomes_project 4 56476833 56822512 + MGP_LPJ_P0065659 protein_coding nonsense_mediated_decay MGP_LPJ_T0065661.1 MGP_LPJ_G0028233.1 mouse_genomes_project 4 56476984 56775313 + MGP_LPJ_P0065661 protein_coding nonsense_mediated_decay MGP_LPJ_T0065667.1 MGP_LPJ_G0028233.1 mouse_genomes_project 4 56766018 56822514 + MGP_LPJ_P0065667 protein_coding protein_coding MGP_LPJ_T0098598.1 MGP_LPJ_G0036872.1 mouse_genomes_project 4 58108651 58111046 - Gm12594 sense_intronic sense_intronic MGP_LPJ_T0069331.1 MGP_LPJ_G0029077.1 mouse_genomes_project 4 156178188 156181791 + MGP_LPJ_P0069331 Hes2 protein_coding protein_coding MGP_LPJ_T0069332.1 MGP_LPJ_G0029077.1 mouse_genomes_project 4 156178870 156179922 + Hes2 protein_coding processed_transcript MGP_LPJ_T0068525.1 MGP_LPJ_G0028879.1 mouse_genomes_project 4 139209100 139263888 - MGP_LPJ_P0068525 Kdm1a protein_coding protein_coding MGP_LPJ_T0068526.1 MGP_LPJ_G0028879.1 mouse_genomes_project 4 139209104 139263852 - MGP_LPJ_P0068526 Kdm1a protein_coding protein_coding MGP_LPJ_T0068527.1 MGP_LPJ_G0028879.1 mouse_genomes_project 4 139209408 139263473 - MGP_LPJ_P0068527 Kdm1a protein_coding protein_coding MGP_LPJ_T0068528.1 MGP_LPJ_G0028879.1 mouse_genomes_project 4 139209437 139211103 - Kdm1a protein_coding retained_intron MGP_LPJ_T0068529.1 MGP_LPJ_G0028879.1 mouse_genomes_project 4 139210433 139211733 - Kdm1a protein_coding retained_intron MGP_LPJ_T0068530.1 MGP_LPJ_G0028879.1 mouse_genomes_project 4 139211681 139213885 - Kdm1a protein_coding retained_intron MGP_LPJ_T0068531.1 MGP_LPJ_G0028879.1 mouse_genomes_project 4 139213767 139220911 - Kdm1a protein_coding retained_intron MGP_LPJ_T0068532.1 MGP_LPJ_G0028879.1 mouse_genomes_project 4 139213795 139228017 - MGP_LPJ_P0068532 Kdm1a protein_coding protein_coding MGP_LPJ_T0068533.1 MGP_LPJ_G0028879.1 mouse_genomes_project 4 139217941 139237686 - MGP_LPJ_P0068533 Kdm1a protein_coding protein_coding MGP_LPJ_T0010675.1 MGP_LPJ_G0008793.1 mouse_genomes_project 4 153922074 153922176 + Mir34a miRNA miRNA MGP_LPJ_T0065465.1 MGP_LPJ_G0028178.1 mouse_genomes_project 4 45040854 45400528 - MGP_LPJ_P0065465 Gabbr2 protein_coding protein_coding MGP_LPJ_T0065466.1 MGP_LPJ_G0028178.1 mouse_genomes_project 4 45043049 45069732 - Gabbr2 protein_coding processed_transcript MGP_LPJ_T0065467.1 MGP_LPJ_G0028178.1 mouse_genomes_project 4 45057609 45107483 - MGP_LPJ_P0065467 Gabbr2 protein_coding protein_coding MGP_LPJ_T0065468.1 MGP_LPJ_G0028178.1 mouse_genomes_project 4 45195300 45259824 - Gabbr2 protein_coding processed_transcript MGP_LPJ_T0010661.1 MGP_LPJ_G0008779.1 mouse_genomes_project 4 140274913 140274998 + Mir7018 miRNA miRNA MGP_LPJ_T0004453.1 MGP_LPJ_G0003881.1 mouse_genomes_project 4 17419453 17423565 + Gm11872 antisense antisense MGP_LPJ_T0065475.1 MGP_LPJ_G0028181.1 mouse_genomes_project 4 45632644 45743077 + MGP_LPJ_P0065475 Col15a1 protein_coding protein_coding MGP_LPJ_T0065476.1 MGP_LPJ_G0028181.1 mouse_genomes_project 4 45632644 45743081 + MGP_LPJ_P0065476 Col15a1 protein_coding protein_coding MGP_LPJ_T0065477.1 MGP_LPJ_G0028181.1 mouse_genomes_project 4 45659212 45671460 + Col15a1 protein_coding processed_transcript MGP_LPJ_T0065478.1 MGP_LPJ_G0028181.1 mouse_genomes_project 4 45684477 45689642 + Col15a1 protein_coding processed_transcript MGP_LPJ_T0065479.1 MGP_LPJ_G0028181.1 mouse_genomes_project 4 45684798 45689831 + Col15a1 protein_coding processed_transcript MGP_LPJ_T0065480.1 MGP_LPJ_G0028181.1 mouse_genomes_project 4 45716301 45721504 + MGP_LPJ_P0065480 Col15a1 protein_coding protein_coding MGP_LPJ_T0065481.1 MGP_LPJ_G0028181.1 mouse_genomes_project 4 45716313 45743081 + MGP_LPJ_P0065481 Col15a1 protein_coding protein_coding MGP_LPJ_T0065482.1 MGP_LPJ_G0028181.1 mouse_genomes_project 4 45716531 45727589 + MGP_LPJ_P0065482 Col15a1 protein_coding protein_coding MGP_LPJ_T0065483.1 MGP_LPJ_G0028181.1 mouse_genomes_project 4 45732017 45743076 + MGP_LPJ_P0065483 Col15a1 protein_coding protein_coding MGP_LPJ_T0069691.1 MGP_LPJ_G0029142.1 mouse_genomes_project 4 160244414 160249665 + MGP_LPJ_P0069691 Ube2j2 protein_coding protein_coding MGP_LPJ_T0069692.1 MGP_LPJ_G0029142.1 mouse_genomes_project 4 160244417 160252068 + Ube2j2 protein_coding processed_transcript MGP_LPJ_T0069693.1 MGP_LPJ_G0029142.1 mouse_genomes_project 4 160244463 160259241 + MGP_LPJ_P0069693 Ube2j2 protein_coding protein_coding MGP_LPJ_T0069694.1 MGP_LPJ_G0029142.1 mouse_genomes_project 4 160244553 160252235 + Ube2j2 protein_coding retained_intron MGP_LPJ_T0069695.1 MGP_LPJ_G0029142.1 mouse_genomes_project 4 160244612 160259165 + MGP_LPJ_P0069695 Ube2j2 protein_coding unknown_likely_coding MGP_LPJ_T0069696.1 MGP_LPJ_G0029142.1 mouse_genomes_project 4 160255622 160258200 + Ube2j2 protein_coding retained_intron MGP_LPJ_T0069697.1 MGP_LPJ_G0029142.1 mouse_genomes_project 4 160257804 160261359 + Ube2j2 protein_coding processed_transcript MGP_LPJ_T0069387.1 MGP_LPJ_G0029086.1 mouse_genomes_project 4 156525547 156625787 + Nphp4 protein_coding processed_transcript MGP_LPJ_T0069388.1 MGP_LPJ_G0029086.1 mouse_genomes_project 4 156526737 156625795 + MGP_LPJ_P0069388 Nphp4 protein_coding unknown_likely_coding MGP_LPJ_T0069389.1 MGP_LPJ_G0029086.1 mouse_genomes_project 4 156527019 156540705 + Nphp4 protein_coding processed_transcript MGP_LPJ_T0069390.1 MGP_LPJ_G0029086.1 mouse_genomes_project 4 156538609 156551040 + Nphp4 protein_coding processed_transcript MGP_LPJ_T0069391.1 MGP_LPJ_G0029086.1 mouse_genomes_project 4 156555712 156575346 + Nphp4 protein_coding processed_transcript MGP_LPJ_T0066467.1 MGP_LPJ_G0028436.1 mouse_genomes_project 4 107459246 107476833 + MGP_LPJ_P0066467 Ttc22 protein_coding protein_coding MGP_LPJ_T0066468.1 MGP_LPJ_G0028436.1 mouse_genomes_project 4 107472617 107474272 + Ttc22 protein_coding processed_transcript MGP_LPJ_T0066400.1 MGP_LPJ_G0028418.1 mouse_genomes_project 4 103728425 103766479 - Wdr78 protein_coding retained_intron MGP_LPJ_T0066401.1 MGP_LPJ_G0028418.1 mouse_genomes_project 4 103728425 103807599 - MGP_LPJ_P0066401 Wdr78 protein_coding protein_coding MGP_LPJ_T0066402.1 MGP_LPJ_G0028418.1 mouse_genomes_project 4 103728429 103807855 - MGP_LPJ_P0066402 Wdr78 protein_coding protein_coding MGP_LPJ_T0066403.1 MGP_LPJ_G0028418.1 mouse_genomes_project 4 103728429 103807524 - MGP_LPJ_P0066403 Wdr78 protein_coding nonsense_mediated_decay MGP_LPJ_T0066404.1 MGP_LPJ_G0028418.1 mouse_genomes_project 4 103728461 103769096 - Wdr78 protein_coding retained_intron MGP_LPJ_T0066405.1 MGP_LPJ_G0028418.1 mouse_genomes_project 4 103729632 103732037 - Wdr78 protein_coding processed_transcript MGP_LPJ_T0066406.1 MGP_LPJ_G0028418.1 mouse_genomes_project 4 103729651 103766300 - MGP_LPJ_P0066406 Wdr78 protein_coding protein_coding MGP_LPJ_T0066407.1 MGP_LPJ_G0028418.1 mouse_genomes_project 4 103774218 103779638 - MGP_LPJ_P0066407 Wdr78 protein_coding protein_coding MGP_LPJ_T0014616.1 MGP_LPJ_G0012707.1 mouse_genomes_project 4 95413793 95414238 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014384.1 MGP_LPJ_G0012475.1 mouse_genomes_project 4 12945544 12946866 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099513.1 MGP_LPJ_G0037776.1 mouse_genomes_project 4 118031997 118032102 + Gm26355 snRNA snRNA MGP_LPJ_T0017986.1 MGP_LPJ_G0015455.1 mouse_genomes_project 4 30900909 30908683 - Gm11934 processed_transcript processed_transcript MGP_LPJ_T0017970.1 MGP_LPJ_G0015447.1 mouse_genomes_project 4 674298 723254 + A830012C17Rik processed_transcript processed_transcript MGP_LPJ_T0014684.1 MGP_LPJ_G0012775.1 mouse_genomes_project 4 118902160 118904855 - processed_pseudogene processed_pseudogene MGP_LPJ_T0066111.1 MGP_LPJ_G0028340.1 mouse_genomes_project 4 88854045 88860811 - MGP_LPJ_P0066111 C87499 protein_coding protein_coding MGP_LPJ_T0066112.1 MGP_LPJ_G0028340.1 mouse_genomes_project 4 88854045 88860763 - MGP_LPJ_P0066112 C87499 protein_coding protein_coding MGP_LPJ_T0066113.1 MGP_LPJ_G0028340.1 mouse_genomes_project 4 88854894 88860963 - MGP_LPJ_P0066113 C87499 protein_coding protein_coding MGP_LPJ_T0066114.1 MGP_LPJ_G0028340.1 mouse_genomes_project 4 88855623 88860694 - MGP_LPJ_P0066114 C87499 protein_coding protein_coding MGP_LPJ_T0066115.1 MGP_LPJ_G0028340.1 mouse_genomes_project 4 88855913 88860743 - MGP_LPJ_P0066115 C87499 protein_coding protein_coding MGP_LPJ_T0065491.1 MGP_LPJ_G0028184.1 mouse_genomes_project 4 45913412 45921939 + MGP_LPJ_P0065491 protein_coding protein_coding MGP_LPJ_T0065492.1 MGP_LPJ_G0028184.1 mouse_genomes_project 4 45913518 45921825 + MGP_LPJ_P0065492 protein_coding protein_coding MGP_LPJ_T0065493.1 MGP_LPJ_G0028184.1 mouse_genomes_project 4 45913562 45921791 + MGP_LPJ_P0065493 protein_coding protein_coding MGP_LPJ_T0065494.1 MGP_LPJ_G0028184.1 mouse_genomes_project 4 45913702 45919488 + protein_coding retained_intron MGP_LPJ_T0066625.1 MGP_LPJ_G0028460.1 mouse_genomes_project 4 108877620 108927627 + MGP_LPJ_P0066625 Slc1a7 protein_coding protein_coding MGP_LPJ_T0066626.1 MGP_LPJ_G0028460.1 mouse_genomes_project 4 108924117 108927621 + Slc1a7 protein_coding retained_intron MGP_LPJ_T0011577.1 MGP_LPJ_G0009695.1 mouse_genomes_project 4 44454182 44454449 + Gm23250 misc_RNA misc_RNA MGP_LPJ_T0068948.1 MGP_LPJ_G0028994.1 mouse_genomes_project 4 147812972 147830685 - MGP_LPJ_P0068948 Pramef12 protein_coding protein_coding MGP_LPJ_T0068949.1 MGP_LPJ_G0028994.1 mouse_genomes_project 4 147816345 147830638 - MGP_LPJ_P0068949 Pramef12 protein_coding protein_coding MGP_LPJ_T0014632.1 MGP_LPJ_G0012723.1 mouse_genomes_project 4 100929487 100930232 - processed_pseudogene processed_pseudogene MGP_LPJ_T0066845.1 MGP_LPJ_G0028499.1 mouse_genomes_project 4 113349131 113422455 - MGP_LPJ_P0066845 Skint10 protein_coding protein_coding MGP_LPJ_T0066846.1 MGP_LPJ_G0028499.1 mouse_genomes_project 4 113417212 113422496 - MGP_LPJ_P0066846 Skint10 protein_coding protein_coding MGP_LPJ_T0066847.1 MGP_LPJ_G0028499.1 mouse_genomes_project 4 113418637 113422457 - Skint10 protein_coding processed_transcript MGP_LPJ_T0069285.1 MGP_LPJ_G0029069.1 mouse_genomes_project 4 156000074 156006700 - MGP_LPJ_P0069285 Phf13 protein_coding protein_coding MGP_LPJ_T0067881.1 MGP_LPJ_G0028746.1 mouse_genomes_project 4 131837813 131838955 - Ccdc28b protein_coding processed_transcript MGP_LPJ_T0067882.1 MGP_LPJ_G0028746.1 mouse_genomes_project 4 131837813 131842287 - MGP_LPJ_P0067882 Ccdc28b protein_coding protein_coding MGP_LPJ_T0067883.1 MGP_LPJ_G0028746.1 mouse_genomes_project 4 131837814 131839278 - Ccdc28b protein_coding retained_intron MGP_LPJ_T0067884.1 MGP_LPJ_G0028746.1 mouse_genomes_project 4 131837815 131839784 - Ccdc28b protein_coding processed_transcript MGP_LPJ_T0067885.1 MGP_LPJ_G0028746.1 mouse_genomes_project 4 131837815 131842177 - MGP_LPJ_P0067885 Ccdc28b protein_coding nonsense_mediated_decay MGP_LPJ_T0067886.1 MGP_LPJ_G0028746.1 mouse_genomes_project 4 131838838 131842218 - MGP_LPJ_P0067886 Ccdc28b protein_coding protein_coding MGP_LPJ_T0067887.1 MGP_LPJ_G0028746.1 mouse_genomes_project 4 131839111 131841065 - Ccdc28b protein_coding processed_transcript MGP_LPJ_T0067888.1 MGP_LPJ_G0028746.1 mouse_genomes_project 4 131839365 131842226 - MGP_LPJ_P0067888 Ccdc28b protein_coding protein_coding MGP_LPJ_T0067889.1 MGP_LPJ_G0028746.1 mouse_genomes_project 4 131840517 131842184 - Ccdc28b protein_coding retained_intron MGP_LPJ_T0067890.1 MGP_LPJ_G0028746.1 mouse_genomes_project 4 131841639 131842239 - Ccdc28b protein_coding retained_intron MGP_LPJ_T0068556.1 MGP_LPJ_G0028892.1 mouse_genomes_project 4 140181218 140183370 + MGP_LPJ_P0068556 1700013G24Rik protein_coding protein_coding MGP_LPJ_T0066452.1 MGP_LPJ_G0028429.1 mouse_genomes_project 4 105889472 105970729 + MGP_LPJ_P0066452 Plpp3 protein_coding protein_coding MGP_LPJ_T0064808.1 MGP_LPJ_G0028044.1 mouse_genomes_project 4 30840677 30843765 - MGP_LPJ_P0064808 Pnrc1 protein_coding protein_coding MGP_LPJ_T0064809.1 MGP_LPJ_G0028044.1 mouse_genomes_project 4 30841258 30842830 - Pnrc1 protein_coding processed_transcript MGP_LPJ_T0064810.1 MGP_LPJ_G0028044.1 mouse_genomes_project 4 30841266 30887678 - Pnrc1 protein_coding processed_transcript MGP_LPJ_T0064653.1 MGP_LPJ_G0028006.1 mouse_genomes_project 4 16666980 16712884 + MGP_LPJ_P0064653 Gm12353 protein_coding protein_coding MGP_LPJ_T0066705.1 MGP_LPJ_G0028477.1 mouse_genomes_project 4 109842164 109843386 - MGP_LPJ_P0066705 A730015C16Rik protein_coding protein_coding MGP_LPJ_T0004517.1 MGP_LPJ_G0003930.1 mouse_genomes_project 4 107883044 107887566 - Gm12786 antisense antisense MGP_LPJ_T0014597.1 MGP_LPJ_G0012688.1 mouse_genomes_project 4 89390782 89391275 - processed_pseudogene processed_pseudogene MGP_LPJ_T0066712.1 MGP_LPJ_G0028480.1 mouse_genomes_project 4 110003265 110070347 + MGP_LPJ_P0066712 Nrd1 protein_coding protein_coding MGP_LPJ_T0066713.1 MGP_LPJ_G0028480.1 mouse_genomes_project 4 110003265 110070347 + MGP_LPJ_P0066713 Nrd1 protein_coding protein_coding MGP_LPJ_T0066714.1 MGP_LPJ_G0028480.1 mouse_genomes_project 4 110003380 110069731 + MGP_LPJ_P0066714 Nrd1 protein_coding protein_coding MGP_LPJ_T0066715.1 MGP_LPJ_G0028480.1 mouse_genomes_project 4 110021677 110052846 + MGP_LPJ_P0066715 Nrd1 protein_coding protein_coding MGP_LPJ_T0066716.1 MGP_LPJ_G0028480.1 mouse_genomes_project 4 110028892 110038197 + Nrd1 protein_coding retained_intron MGP_LPJ_T0066717.1 MGP_LPJ_G0028480.1 mouse_genomes_project 4 110037891 110051607 + Nrd1 protein_coding retained_intron MGP_LPJ_T0066718.1 MGP_LPJ_G0028480.1 mouse_genomes_project 4 110047948 110052308 + Nrd1 protein_coding retained_intron MGP_LPJ_T0066719.1 MGP_LPJ_G0028480.1 mouse_genomes_project 4 110048393 110070045 + Nrd1 protein_coding processed_transcript MGP_LPJ_T0066720.1 MGP_LPJ_G0028480.1 mouse_genomes_project 4 110054883 110059466 + Nrd1 protein_coding processed_transcript MGP_LPJ_T0066721.1 MGP_LPJ_G0028480.1 mouse_genomes_project 4 110063514 110065437 + Nrd1 protein_coding retained_intron MGP_LPJ_T0066722.1 MGP_LPJ_G0028480.1 mouse_genomes_project 4 110067503 110068370 + Nrd1 protein_coding retained_intron MGP_LPJ_T0066723.1 MGP_LPJ_G0028480.1 mouse_genomes_project 4 110067560 110069250 + Nrd1 protein_coding retained_intron MGP_LPJ_T0067258.1 MGP_LPJ_G0028593.1 mouse_genomes_project 4 120118169 120127513 + MGP_LPJ_P0067258 protein_coding protein_coding MGP_LPJ_T0068980.1 MGP_LPJ_G0029008.1 mouse_genomes_project 4 151199231 151205406 - MGP_LPJ_P0068980 protein_coding protein_coding MGP_LPJ_T0014694.1 MGP_LPJ_G0012785.1 mouse_genomes_project 4 120641676 120643201 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014355.1 MGP_LPJ_G0012446.1 mouse_genomes_project 4 4769687 4770147 - processed_pseudogene processed_pseudogene MGP_LPJ_T0068285.1 MGP_LPJ_G0028825.1 mouse_genomes_project 4 136548152 136597708 - MGP_LPJ_P0068285 Cep85 protein_coding protein_coding MGP_LPJ_T0068286.1 MGP_LPJ_G0028825.1 mouse_genomes_project 4 136548160 136597577 - MGP_LPJ_P0068286 Cep85 protein_coding protein_coding MGP_LPJ_T0068287.1 MGP_LPJ_G0028825.1 mouse_genomes_project 4 136549389 136551208 - Cep85 protein_coding processed_transcript MGP_LPJ_T0068288.1 MGP_LPJ_G0028825.1 mouse_genomes_project 4 136550797 136560877 - Cep85 protein_coding retained_intron MGP_LPJ_T0068289.1 MGP_LPJ_G0028825.1 mouse_genomes_project 4 136567069 136569283 - Cep85 protein_coding retained_intron MGP_LPJ_T0068290.1 MGP_LPJ_G0028825.1 mouse_genomes_project 4 136570703 136571726 - Cep85 protein_coding processed_transcript MGP_LPJ_T0068291.1 MGP_LPJ_G0028825.1 mouse_genomes_project 4 136570899 136597681 - MGP_LPJ_P0068291 Cep85 protein_coding nonsense_mediated_decay MGP_LPJ_T0068292.1 MGP_LPJ_G0028825.1 mouse_genomes_project 4 136581997 136597647 - Cep85 protein_coding retained_intron MGP_LPJ_T0068240.1 MGP_LPJ_G0028818.1 mouse_genomes_project 4 136374414 136408420 - MGP_LPJ_P0068240 Dhdds protein_coding protein_coding MGP_LPJ_T0068241.1 MGP_LPJ_G0028818.1 mouse_genomes_project 4 136374443 136408417 - MGP_LPJ_P0068241 Dhdds protein_coding protein_coding MGP_LPJ_T0068242.1 MGP_LPJ_G0028818.1 mouse_genomes_project 4 136374444 136387210 - Dhdds protein_coding processed_transcript MGP_LPJ_T0068243.1 MGP_LPJ_G0028818.1 mouse_genomes_project 4 136374449 136407923 - Dhdds protein_coding processed_transcript MGP_LPJ_T0068244.1 MGP_LPJ_G0028818.1 mouse_genomes_project 4 136374561 136408401 - Dhdds protein_coding processed_transcript MGP_LPJ_T0068245.1 MGP_LPJ_G0028818.1 mouse_genomes_project 4 136375578 136408401 - MGP_LPJ_P0068245 Dhdds protein_coding protein_coding MGP_LPJ_T0068246.1 MGP_LPJ_G0028818.1 mouse_genomes_project 4 136376306 136401913 - MGP_LPJ_P0068246 Dhdds protein_coding protein_coding MGP_LPJ_T0068247.1 MGP_LPJ_G0028818.1 mouse_genomes_project 4 136376334 136407923 - MGP_LPJ_P0068247 Dhdds protein_coding protein_coding MGP_LPJ_T0068248.1 MGP_LPJ_G0028818.1 mouse_genomes_project 4 136376366 136407923 - MGP_LPJ_P0068248 Dhdds protein_coding protein_coding MGP_LPJ_T0068249.1 MGP_LPJ_G0028818.1 mouse_genomes_project 4 136376628 136408448 - MGP_LPJ_P0068249 Dhdds protein_coding protein_coding MGP_LPJ_T0068250.1 MGP_LPJ_G0028818.1 mouse_genomes_project 4 136386792 136404656 - Dhdds protein_coding processed_transcript MGP_LPJ_T0065958.1 MGP_LPJ_G0028312.1 mouse_genomes_project 4 82211306 82433963 - MGP_LPJ_P0065958 Nfib protein_coding protein_coding MGP_LPJ_T0065959.1 MGP_LPJ_G0028312.1 mouse_genomes_project 4 82241193 82434513 - Nfib protein_coding retained_intron MGP_LPJ_T0065960.1 MGP_LPJ_G0028312.1 mouse_genomes_project 4 82242978 82434513 - Nfib protein_coding retained_intron MGP_LPJ_T0065961.1 MGP_LPJ_G0028312.1 mouse_genomes_project 4 82269222 82434967 - Nfib protein_coding retained_intron MGP_LPJ_T0065962.1 MGP_LPJ_G0028312.1 mouse_genomes_project 4 82425184 82434982 - Nfib protein_coding retained_intron MGP_LPJ_T0065963.1 MGP_LPJ_G0028312.1 mouse_genomes_project 4 82427521 82634152 - MGP_LPJ_P0065963 Nfib protein_coding protein_coding MGP_LPJ_T0065964.1 MGP_LPJ_G0028312.1 mouse_genomes_project 4 82427744 82428517 - Nfib protein_coding processed_transcript MGP_LPJ_T0014688.1 MGP_LPJ_G0012779.1 mouse_genomes_project 4 118941322 118941637 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065530.1 MGP_LPJ_G0028194.1 mouse_genomes_project 4 47936939 47968093 - MGP_LPJ_P0065530 Acnat2 protein_coding protein_coding MGP_LPJ_T0066883.1 MGP_LPJ_G0028516.1 mouse_genomes_project 4 116600088 116726426 - MGP_LPJ_P0066883 Cyp4b1 protein_coding protein_coding MGP_LPJ_T0066890.1 MGP_LPJ_G0028516.1 mouse_genomes_project 4 116708811 116724864 - MGP_LPJ_P0066890 Cyp4b1 protein_coding nonsense_mediated_decay MGP_LPJ_T0066891.1 MGP_LPJ_G0028516.1 mouse_genomes_project 4 116708811 116732175 - MGP_LPJ_P0066891 Cyp4b1 protein_coding protein_coding MGP_LPJ_T0066892.1 MGP_LPJ_G0028516.1 mouse_genomes_project 4 116714786 116720432 - Cyp4b1 protein_coding retained_intron MGP_LPJ_T0004582.1 MGP_LPJ_G0003981.1 mouse_genomes_project 4 140658036 140659604 - Gm13012 antisense antisense MGP_LPJ_T0004583.1 MGP_LPJ_G0003981.1 mouse_genomes_project 4 140658036 140659079 - Gm13012 antisense antisense MGP_LPJ_T0004584.1 MGP_LPJ_G0003981.1 mouse_genomes_project 4 140658036 140659593 - Gm13012 antisense antisense MGP_LPJ_T0064554.1 MGP_LPJ_G0027976.1 mouse_genomes_project 4 7993835 8039382 - MGP_LPJ_P0064554 Dpy19l4 protein_coding protein_coding MGP_LPJ_T0064555.1 MGP_LPJ_G0027976.1 mouse_genomes_project 4 7993835 8060018 - MGP_LPJ_P0064555 Dpy19l4 protein_coding protein_coding MGP_LPJ_T0064556.1 MGP_LPJ_G0027976.1 mouse_genomes_project 4 8010213 8060018 - MGP_LPJ_P0064556 Dpy19l4 protein_coding protein_coding MGP_LPJ_T0064557.1 MGP_LPJ_G0027976.1 mouse_genomes_project 4 8013316 8059956 - MGP_LPJ_P0064557 Dpy19l4 protein_coding nonsense_mediated_decay MGP_LPJ_T0064558.1 MGP_LPJ_G0027976.1 mouse_genomes_project 4 8039443 8059928 - Dpy19l4 protein_coding processed_transcript MGP_LPJ_T0064559.1 MGP_LPJ_G0027976.1 mouse_genomes_project 4 8054618 8059981 - Dpy19l4 protein_coding processed_transcript MGP_LPJ_T0004553.1 MGP_LPJ_G0003957.1 mouse_genomes_project 4 125687613 125701649 - Gm12905 antisense antisense MGP_LPJ_T0004554.1 MGP_LPJ_G0003957.1 mouse_genomes_project 4 125687781 125688060 - Gm12905 antisense antisense MGP_LPJ_T0066269.1 MGP_LPJ_G0028388.1 mouse_genomes_project 4 99327380 99332743 - MGP_LPJ_P0066269 I0C0044D17Rik protein_coding protein_coding MGP_LPJ_T0066270.1 MGP_LPJ_G0028388.1 mouse_genomes_project 4 99328718 99329228 - MGP_LPJ_P0066270 I0C0044D17Rik protein_coding protein_coding MGP_LPJ_T0007850.1 MGP_LPJ_G0006419.1 mouse_genomes_project 4 43944134 43946502 + lincRNA lincRNA MGP_LPJ_T0069665.1 MGP_LPJ_G0029138.1 mouse_genomes_project 4 160162628 160167347 - MGP_LPJ_P0069665 Cptp protein_coding protein_coding MGP_LPJ_T0069666.1 MGP_LPJ_G0029138.1 mouse_genomes_project 4 160163203 160167269 - Cptp protein_coding processed_transcript MGP_LPJ_T0069667.1 MGP_LPJ_G0029138.1 mouse_genomes_project 4 160164270 160166725 - MGP_LPJ_P0069667 Cptp protein_coding protein_coding MGP_LPJ_T0098035.1 MGP_LPJ_G0036316.1 mouse_genomes_project 4 99239068 99239156 + pseudogene pseudogene MGP_LPJ_T0067097.1 MGP_LPJ_G0028559.1 mouse_genomes_project 4 118295457 118298710 - MGP_LPJ_P0067097 Rps8 protein_coding protein_coding MGP_LPJ_T0067098.1 MGP_LPJ_G0028559.1 mouse_genomes_project 4 118296321 118298551 - Rps8 protein_coding retained_intron MGP_LPJ_T0067099.1 MGP_LPJ_G0028559.1 mouse_genomes_project 4 118296396 118298536 - Rps8 protein_coding retained_intron MGP_LPJ_T0067100.1 MGP_LPJ_G0028559.1 mouse_genomes_project 4 118296524 118297648 - Rps8 protein_coding retained_intron MGP_LPJ_T0067101.1 MGP_LPJ_G0028559.1 mouse_genomes_project 4 118296572 118298539 - Rps8 protein_coding retained_intron MGP_LPJ_T0004592.1 MGP_LPJ_G0003989.1 mouse_genomes_project 4 144316978 144324579 - antisense antisense MGP_LPJ_T0068978.1 MGP_LPJ_G0029007.1 mouse_genomes_project 4 148700071 148750574 - MGP_LPJ_P0068978 Tnfrsf8 protein_coding protein_coding MGP_LPJ_T0068979.1 MGP_LPJ_G0029007.1 mouse_genomes_project 4 148700073 148750591 - MGP_LPJ_P0068979 Tnfrsf8 protein_coding nonsense_mediated_decay MGP_LPJ_T0065864.1 MGP_LPJ_G0028290.1 mouse_genomes_project 4 64734542 65783711 - MGP_LPJ_P0065864 Astn2 protein_coding protein_coding MGP_LPJ_T0065865.1 MGP_LPJ_G0028290.1 mouse_genomes_project 4 64734542 65783583 - MGP_LPJ_P0065865 Astn2 protein_coding protein_coding MGP_LPJ_T0064799.1 MGP_LPJ_G0028040.1 mouse_genomes_project 4 30648428 30684247 + MGP_LPJ_P0064799 Gabrr2 protein_coding protein_coding MGP_LPJ_T0064800.1 MGP_LPJ_G0028040.1 mouse_genomes_project 4 30648541 30684247 + MGP_LPJ_P0064800 Gabrr2 protein_coding protein_coding MGP_LPJ_T0064801.1 MGP_LPJ_G0028040.1 mouse_genomes_project 4 30667173 30673942 + MGP_LPJ_P0064801 Gabrr2 protein_coding protein_coding MGP_LPJ_T0064802.1 MGP_LPJ_G0028040.1 mouse_genomes_project 4 30669882 30674198 + MGP_LPJ_P0064802 Gabrr2 protein_coding protein_coding MGP_LPJ_T0067135.1 MGP_LPJ_G0028565.1 mouse_genomes_project 4 118844356 118851929 - Dmap1 protein_coding processed_transcript MGP_LPJ_T0067136.1 MGP_LPJ_G0028565.1 mouse_genomes_project 4 118844356 118851949 - MGP_LPJ_P0067136 Dmap1 protein_coding protein_coding MGP_LPJ_T0067137.1 MGP_LPJ_G0028565.1 mouse_genomes_project 4 118844361 118851659 - Dmap1 protein_coding processed_transcript MGP_LPJ_T0067138.1 MGP_LPJ_G0028565.1 mouse_genomes_project 4 118850595 118851897 - Dmap1 protein_coding processed_transcript MGP_LPJ_T0067139.1 MGP_LPJ_G0028565.1 mouse_genomes_project 4 118850977 118851887 - Dmap1 protein_coding processed_transcript MGP_LPJ_T0067140.1 MGP_LPJ_G0028565.1 mouse_genomes_project 4 118851262 118851947 - Dmap1 protein_coding processed_transcript MGP_LPJ_T0065906.1 MGP_LPJ_G0028303.1 mouse_genomes_project 4 73875215 74058037 + MGP_LPJ_P0065906 Kdm4c protein_coding protein_coding MGP_LPJ_T0065907.1 MGP_LPJ_G0028303.1 mouse_genomes_project 4 73884531 74058037 + MGP_LPJ_P0065907 Kdm4c protein_coding protein_coding MGP_LPJ_T0065908.1 MGP_LPJ_G0028303.1 mouse_genomes_project 4 73900457 73980058 + Kdm4c protein_coding processed_transcript MGP_LPJ_T0065909.1 MGP_LPJ_G0028303.1 mouse_genomes_project 4 73900457 73982745 + MGP_LPJ_P0065909 Kdm4c protein_coding protein_coding MGP_LPJ_T0065910.1 MGP_LPJ_G0028303.1 mouse_genomes_project 4 73900458 73911624 + Kdm4c protein_coding processed_transcript MGP_LPJ_T0065911.1 MGP_LPJ_G0028303.1 mouse_genomes_project 4 73900458 73907659 + Kdm4c protein_coding processed_transcript MGP_LPJ_T0014522.1 MGP_LPJ_G0012613.1 mouse_genomes_project 4 54303793 54304218 + processed_pseudogene processed_pseudogene MGP_LPJ_T0065544.1 MGP_LPJ_G0028201.1 mouse_genomes_project 4 48192887 48199570 + MGP_LPJ_P0065544 Rnf20 protein_coding protein_coding MGP_LPJ_T0065545.1 MGP_LPJ_G0028201.1 mouse_genomes_project 4 48192941 48218670 + MGP_LPJ_P0065545 Rnf20 protein_coding protein_coding MGP_LPJ_T0065546.1 MGP_LPJ_G0028201.1 mouse_genomes_project 4 48192941 48211092 + MGP_LPJ_P0065546 Rnf20 protein_coding protein_coding MGP_LPJ_T0065547.1 MGP_LPJ_G0028201.1 mouse_genomes_project 4 48192947 48218671 + MGP_LPJ_P0065547 Rnf20 protein_coding protein_coding MGP_LPJ_T0065548.1 MGP_LPJ_G0028201.1 mouse_genomes_project 4 48192974 48205399 + MGP_LPJ_P0065548 Rnf20 protein_coding protein_coding MGP_LPJ_T0065549.1 MGP_LPJ_G0028201.1 mouse_genomes_project 4 48193018 48200881 + Rnf20 protein_coding processed_transcript MGP_LPJ_T0065550.1 MGP_LPJ_G0028201.1 mouse_genomes_project 4 48193040 48203827 + Rnf20 protein_coding processed_transcript MGP_LPJ_T0065551.1 MGP_LPJ_G0028201.1 mouse_genomes_project 4 48202585 48209280 + Rnf20 protein_coding processed_transcript MGP_LPJ_T0065552.1 MGP_LPJ_G0028201.1 mouse_genomes_project 4 48211103 48213667 + Rnf20 protein_coding processed_transcript MGP_LPJ_T0065553.1 MGP_LPJ_G0028201.1 mouse_genomes_project 4 48211808 48213391 + Rnf20 protein_coding processed_transcript MGP_LPJ_T0014531.1 MGP_LPJ_G0012622.1 mouse_genomes_project 4 58532862 58533130 + processed_pseudogene processed_pseudogene MGP_LPJ_T0064954.1 MGP_LPJ_G0028079.1 mouse_genomes_project 4 39191278 39276841 - MGP_LPJ_P0064954 Ubap2 protein_coding protein_coding MGP_LPJ_T0064955.1 MGP_LPJ_G0028079.1 mouse_genomes_project 4 39191281 39276832 - MGP_LPJ_P0064955 Ubap2 protein_coding protein_coding MGP_LPJ_T0064956.1 MGP_LPJ_G0028079.1 mouse_genomes_project 4 39192158 39192731 - MGP_LPJ_P0064956 Ubap2 protein_coding protein_coding MGP_LPJ_T0064957.1 MGP_LPJ_G0028079.1 mouse_genomes_project 4 39196183 39197043 - Ubap2 protein_coding processed_transcript MGP_LPJ_T0064958.1 MGP_LPJ_G0028079.1 mouse_genomes_project 4 39203860 39212369 - MGP_LPJ_P0064958 Ubap2 protein_coding protein_coding MGP_LPJ_T0064959.1 MGP_LPJ_G0028079.1 mouse_genomes_project 4 39221198 39252350 - MGP_LPJ_P0064959 Ubap2 protein_coding protein_coding MGP_LPJ_T0064960.1 MGP_LPJ_G0028079.1 mouse_genomes_project 4 39221201 39276813 - Ubap2 protein_coding processed_transcript MGP_LPJ_T0064961.1 MGP_LPJ_G0028079.1 mouse_genomes_project 4 39275762 39276824 - Ubap2 protein_coding processed_transcript MGP_LPJ_T0010609.1 MGP_LPJ_G0008727.1 mouse_genomes_project 4 38974473 38974537 + Mir3094 miRNA miRNA MGP_LPJ_T0004579.1 MGP_LPJ_G0003978.1 mouse_genomes_project 4 138614343 138614749 - Gm24362 antisense antisense MGP_LPJ_T0068170.1 MGP_LPJ_G0028801.1 mouse_genomes_project 4 135604907 135616969 + MGP_LPJ_P0068170 Map3k6 protein_coding protein_coding MGP_LPJ_T0068171.1 MGP_LPJ_G0028801.1 mouse_genomes_project 4 135611268 135612124 + Map3k6 protein_coding processed_transcript MGP_LPJ_T0068172.1 MGP_LPJ_G0028801.1 mouse_genomes_project 4 135611344 135612152 + Map3k6 protein_coding processed_transcript MGP_LPJ_T0068173.1 MGP_LPJ_G0028801.1 mouse_genomes_project 4 135614887 135616968 + Map3k6 protein_coding processed_transcript MGP_LPJ_T0011582.1 MGP_LPJ_G0009700.1 mouse_genomes_project 4 53243191 53243433 + Gm25687 misc_RNA misc_RNA MGP_LPJ_T0065002.1 MGP_LPJ_G0028091.1 mouse_genomes_project 4 39767713 39769215 - MGP_LPJ_P0065002 Rpp25l protein_coding protein_coding MGP_LPJ_T0064421.1 MGP_LPJ_G0027952.1 mouse_genomes_project 4 437506 476436 - MGP_LPJ_P0064421 Plag1 protein_coding protein_coding MGP_LPJ_T0064422.1 MGP_LPJ_G0027952.1 mouse_genomes_project 4 442508 476459 - MGP_LPJ_P0064422 Plag1 protein_coding nonsense_mediated_decay MGP_LPJ_T0064423.1 MGP_LPJ_G0027952.1 mouse_genomes_project 4 443167 476477 - MGP_LPJ_P0064423 Plag1 protein_coding nonsense_mediated_decay MGP_LPJ_T0064424.1 MGP_LPJ_G0027952.1 mouse_genomes_project 4 449475 476447 - Plag1 protein_coding retained_intron MGP_LPJ_T0069593.1 MGP_LPJ_G0029122.1 mouse_genomes_project 4 159890964 159897038 + Cdk11b protein_coding processed_transcript MGP_LPJ_T0069594.1 MGP_LPJ_G0029122.1 mouse_genomes_project 4 159890979 159916397 + MGP_LPJ_P0069594 Cdk11b protein_coding protein_coding MGP_LPJ_T0069595.1 MGP_LPJ_G0029122.1 mouse_genomes_project 4 159890990 159891807 + Cdk11b protein_coding processed_transcript MGP_LPJ_T0069596.1 MGP_LPJ_G0029122.1 mouse_genomes_project 4 159890993 159916397 + MGP_LPJ_P0069596 Cdk11b protein_coding protein_coding MGP_LPJ_T0069597.1 MGP_LPJ_G0029122.1 mouse_genomes_project 4 159891020 159916397 + MGP_LPJ_P0069597 Cdk11b protein_coding protein_coding MGP_LPJ_T0069598.1 MGP_LPJ_G0029122.1 mouse_genomes_project 4 159900865 159906521 + Cdk11b protein_coding processed_transcript MGP_LPJ_T0069599.1 MGP_LPJ_G0029122.1 mouse_genomes_project 4 159913661 159914864 + Cdk11b protein_coding processed_transcript MGP_LPJ_T0069600.1 MGP_LPJ_G0029122.1 mouse_genomes_project 4 159913826 159914751 + Cdk11b protein_coding processed_transcript MGP_LPJ_T0007813.1 MGP_LPJ_G0006387.1 mouse_genomes_project 4 7145836 7168049 - lincRNA lincRNA MGP_LPJ_T0007814.1 MGP_LPJ_G0006387.1 mouse_genomes_project 4 7166261 7494833 - lincRNA lincRNA MGP_LPJ_T0007815.1 MGP_LPJ_G0006387.1 mouse_genomes_project 4 7436051 7494817 - lincRNA lincRNA MGP_LPJ_T0007816.1 MGP_LPJ_G0006387.1 mouse_genomes_project 4 7436327 7494820 - lincRNA lincRNA MGP_LPJ_T0100734.1 MGP_LPJ_G0038997.1 mouse_genomes_project 4 3215958 3216090 - Gm22473 snoRNA snoRNA MGP_LPJ_T0067513.1 MGP_LPJ_G0028664.1 mouse_genomes_project 4 126563620 126581297 + MGP_LPJ_P0067513 Sf3a3 protein_coding protein_coding MGP_LPJ_T0067514.1 MGP_LPJ_G0028664.1 mouse_genomes_project 4 126563727 126567568 + Sf3a3 protein_coding processed_transcript MGP_LPJ_T0067515.1 MGP_LPJ_G0028664.1 mouse_genomes_project 4 126570573 126572223 + Sf3a3 protein_coding processed_transcript MGP_LPJ_T0099496.1 MGP_LPJ_G0037759.1 mouse_genomes_project 4 93955069 93955176 + Gm24796 snRNA snRNA MGP_LPJ_T0004559.1 MGP_LPJ_G0003962.1 mouse_genomes_project 4 128087441 128089196 + Gm12946 antisense antisense MGP_LPJ_T0014669.1 MGP_LPJ_G0012760.1 mouse_genomes_project 4 112930022 112931068 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065658.1 MGP_LPJ_G0028232.1 mouse_genomes_project 4 56476566 56623307 + MGP_LPJ_P0065658 protein_coding unknown_likely_coding MGP_LPJ_T0065660.1 MGP_LPJ_G0028232.1 mouse_genomes_project 4 56476974 56623349 + MGP_LPJ_P0065660 protein_coding nonsense_mediated_decay MGP_LPJ_T0065662.1 MGP_LPJ_G0028232.1 mouse_genomes_project 4 56551385 56622609 + protein_coding retained_intron MGP_LPJ_T0004560.1 MGP_LPJ_G0003963.1 mouse_genomes_project 4 130220001 130250673 - Csmd2os antisense antisense MGP_LPJ_T0004561.1 MGP_LPJ_G0003963.1 mouse_genomes_project 4 130220001 130262927 - Csmd2os antisense antisense MGP_LPJ_T0065714.1 MGP_LPJ_G0028248.1 mouse_genomes_project 4 58015323 58087620 - MGP_LPJ_P0065714 AI481877 protein_coding protein_coding MGP_LPJ_T0065715.1 MGP_LPJ_G0028248.1 mouse_genomes_project 4 58055180 58084781 - AI481877 protein_coding retained_intron MGP_LPJ_T0068646.1 MGP_LPJ_G0028907.1 mouse_genomes_project 4 141256438 141266900 + MGP_LPJ_P0068646 Mul1 protein_coding protein_coding MGP_LPJ_T0068647.1 MGP_LPJ_G0028907.1 mouse_genomes_project 4 141256444 141266897 + MGP_LPJ_P0068647 Mul1 protein_coding protein_coding MGP_LPJ_T0068648.1 MGP_LPJ_G0028907.1 mouse_genomes_project 4 141256490 141260779 + MGP_LPJ_P0068648 Mul1 protein_coding protein_coding MGP_LPJ_T0014646.1 MGP_LPJ_G0012737.1 mouse_genomes_project 4 106264139 106264590 + processed_pseudogene processed_pseudogene MGP_LPJ_T0066122.1 MGP_LPJ_G0028347.1 mouse_genomes_project 4 88994991 88995564 + MGP_LPJ_P0066122 Ifna7 protein_coding protein_coding MGP_LPJ_T0065663.1 MGP_LPJ_G0028234.1 mouse_genomes_project 4 56632029 56777651 + protein_coding processed_transcript MGP_LPJ_T0065664.1 MGP_LPJ_G0028234.1 mouse_genomes_project 4 56666275 56822517 + MGP_LPJ_P0065664 protein_coding protein_coding MGP_LPJ_T0065665.1 MGP_LPJ_G0028234.1 mouse_genomes_project 4 56696513 56775931 + MGP_LPJ_P0065665 protein_coding protein_coding MGP_LPJ_T0065666.1 MGP_LPJ_G0028234.1 mouse_genomes_project 4 56748730 56775778 + MGP_LPJ_P0065666 protein_coding protein_coding MGP_LPJ_T0067696.1 MGP_LPJ_G0028705.1 mouse_genomes_project 4 129146658 129152578 + MGP_LPJ_P0067696 Tmem35b protein_coding protein_coding MGP_LPJ_T0067697.1 MGP_LPJ_G0028705.1 mouse_genomes_project 4 129148996 129152578 + MGP_LPJ_P0067697 Tmem35b protein_coding protein_coding MGP_LPJ_T0004580.1 MGP_LPJ_G0003979.1 mouse_genomes_project 4 140158123 140159924 - Gm13010 antisense antisense MGP_LPJ_T0100806.1 MGP_LPJ_G0039069.1 mouse_genomes_project 4 134606799 134606936 + Snora16a snoRNA snoRNA MGP_LPJ_T0014765.1 MGP_LPJ_G0012856.1 mouse_genomes_project 4 146939284 146941379 - processed_pseudogene processed_pseudogene MGP_LPJ_T0066087.1 MGP_LPJ_G0028332.1 mouse_genomes_project 4 87958818 88233974 - MGP_LPJ_P0066087 Mllt3 protein_coding protein_coding MGP_LPJ_T0066088.1 MGP_LPJ_G0028332.1 mouse_genomes_project 4 87962586 87998129 - MGP_LPJ_P0066088 Mllt3 protein_coding protein_coding MGP_LPJ_T0066089.1 MGP_LPJ_G0028332.1 mouse_genomes_project 4 87962623 87998100 - MGP_LPJ_P0066089 Mllt3 protein_coding protein_coding MGP_LPJ_T0066090.1 MGP_LPJ_G0028332.1 mouse_genomes_project 4 87981513 88234160 - Mllt3 protein_coding processed_transcript MGP_LPJ_T0066091.1 MGP_LPJ_G0028332.1 mouse_genomes_project 4 88027446 88071194 - Mllt3 protein_coding processed_transcript MGP_LPJ_T0066092.1 MGP_LPJ_G0028332.1 mouse_genomes_project 4 88032084 88232987 - Mllt3 protein_coding retained_intron MGP_LPJ_T0066093.1 MGP_LPJ_G0028332.1 mouse_genomes_project 4 88035749 88232987 - MGP_LPJ_P0066093 Mllt3 protein_coding nonsense_mediated_decay MGP_LPJ_T0068542.1 MGP_LPJ_G0028883.1 mouse_genomes_project 4 139558222 139565657 - MGP_LPJ_P0068542 C1qb protein_coding protein_coding MGP_LPJ_T0014637.1 MGP_LPJ_G0012728.1 mouse_genomes_project 4 101961476 101962190 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014668.1 MGP_LPJ_G0012759.1 mouse_genomes_project 4 112930022 112931015 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065349.1 MGP_LPJ_G0028150.1 mouse_genomes_project 4 43248008 43257348 + MGP_LPJ_P0065349 Grhpr protein_coding protein_coding MGP_LPJ_T0065350.1 MGP_LPJ_G0028150.1 mouse_genomes_project 4 43248016 43250557 + MGP_LPJ_P0065350 Grhpr protein_coding protein_coding MGP_LPJ_T0065351.1 MGP_LPJ_G0028150.1 mouse_genomes_project 4 43248045 43255624 + MGP_LPJ_P0065351 Grhpr protein_coding protein_coding MGP_LPJ_T0065352.1 MGP_LPJ_G0028150.1 mouse_genomes_project 4 43248046 43253941 + Grhpr protein_coding processed_transcript MGP_LPJ_T0065353.1 MGP_LPJ_G0028150.1 mouse_genomes_project 4 43248074 43253862 + MGP_LPJ_P0065353 Grhpr protein_coding nonsense_mediated_decay MGP_LPJ_T0065354.1 MGP_LPJ_G0028150.1 mouse_genomes_project 4 43248113 43253004 + Grhpr protein_coding processed_transcript MGP_LPJ_T0007947.1 MGP_LPJ_G0006496.1 mouse_genomes_project 4 118659071 118663227 + Gm12827 lincRNA lincRNA MGP_LPJ_T0007909.1 MGP_LPJ_G0006467.1 mouse_genomes_project 4 93790295 94033110 - Gm12649 lincRNA lincRNA MGP_LPJ_T0010655.1 MGP_LPJ_G0008773.1 mouse_genomes_project 4 137042781 137042910 - Mir6403 miRNA miRNA MGP_LPJ_T0007946.1 MGP_LPJ_G0006495.1 mouse_genomes_project 4 117250895 117252382 + Gm12951 lincRNA lincRNA MGP_LPJ_T0066489.1 MGP_LPJ_G0028440.1 mouse_genomes_project 4 107575632 107591619 + MGP_LPJ_P0066489 Fam151a protein_coding protein_coding MGP_LPJ_T0014468.1 MGP_LPJ_G0012559.1 mouse_genomes_project 4 37750344 37751263 + processed_pseudogene processed_pseudogene MGP_LPJ_T0069295.1 MGP_LPJ_G0029072.1 mouse_genomes_project 4 156039354 156050178 - MGP_LPJ_P0069295 Tas1r1 protein_coding unknown_likely_coding MGP_LPJ_T0069296.1 MGP_LPJ_G0029072.1 mouse_genomes_project 4 156039363 156051332 - MGP_LPJ_P0069296 Tas1r1 protein_coding protein_coding MGP_LPJ_T0067949.1 MGP_LPJ_G0028756.1 mouse_genomes_project 4 132444186 132453149 - MGP_LPJ_P0067949 Hcrtr1 protein_coding protein_coding MGP_LPJ_T0067950.1 MGP_LPJ_G0028756.1 mouse_genomes_project 4 132444186 132452538 - MGP_LPJ_P0067950 Hcrtr1 protein_coding protein_coding MGP_LPJ_T0067951.1 MGP_LPJ_G0028756.1 mouse_genomes_project 4 132444186 132453346 - MGP_LPJ_P0067951 Hcrtr1 protein_coding protein_coding MGP_LPJ_T0067952.1 MGP_LPJ_G0028756.1 mouse_genomes_project 4 132444810 132451570 - MGP_LPJ_P0067952 Hcrtr1 protein_coding protein_coding MGP_LPJ_T0067962.1 MGP_LPJ_G0028758.1 mouse_genomes_project 4 132528810 132529558 - Gm853 protein_coding processed_transcript MGP_LPJ_T0067963.1 MGP_LPJ_G0028758.1 mouse_genomes_project 4 132528810 132542134 - MGP_LPJ_P0067963 Gm853 protein_coding protein_coding MGP_LPJ_T0014520.1 MGP_LPJ_G0012611.1 mouse_genomes_project 4 54189226 54189611 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065903.1 MGP_LPJ_G0028302.1 mouse_genomes_project 4 73643658 73826405 + MGP_LPJ_P0065903 Frmd3 protein_coding protein_coding MGP_LPJ_T0065904.1 MGP_LPJ_G0028302.1 mouse_genomes_project 4 73643660 73813515 + MGP_LPJ_P0065904 Frmd3 protein_coding protein_coding MGP_LPJ_T0065905.1 MGP_LPJ_G0028302.1 mouse_genomes_project 4 73791801 73812588 + Frmd3 protein_coding processed_transcript MGP_LPJ_T0010653.1 MGP_LPJ_G0008771.1 mouse_genomes_project 4 136111415 136111474 - Mir7227 miRNA miRNA MGP_LPJ_T0007957.1 MGP_LPJ_G0006505.1 mouse_genomes_project 4 126233020 126277646 - 1700057H15Rik lincRNA lincRNA MGP_LPJ_T0007958.1 MGP_LPJ_G0006505.1 mouse_genomes_project 4 126233020 126241737 - 1700057H15Rik lincRNA lincRNA MGP_LPJ_T0007959.1 MGP_LPJ_G0006505.1 mouse_genomes_project 4 126276252 126317493 - 1700057H15Rik lincRNA lincRNA MGP_LPJ_T0007960.1 MGP_LPJ_G0006505.1 mouse_genomes_project 4 126276585 126277636 - 1700057H15Rik lincRNA lincRNA MGP_LPJ_T0066687.1 MGP_LPJ_G0028472.1 mouse_genomes_project 4 109613416 109627602 + MGP_LPJ_P0066687 Cc2d1b protein_coding protein_coding MGP_LPJ_T0066688.1 MGP_LPJ_G0028472.1 mouse_genomes_project 4 109616988 109619483 + MGP_LPJ_P0066688 Cc2d1b protein_coding nonsense_mediated_decay MGP_LPJ_T0066689.1 MGP_LPJ_G0028472.1 mouse_genomes_project 4 109617039 109627602 + MGP_LPJ_P0066689 Cc2d1b protein_coding protein_coding MGP_LPJ_T0066690.1 MGP_LPJ_G0028472.1 mouse_genomes_project 4 109619231 109620239 + Cc2d1b protein_coding retained_intron MGP_LPJ_T0066691.1 MGP_LPJ_G0028472.1 mouse_genomes_project 4 109619496 109620580 + Cc2d1b protein_coding retained_intron MGP_LPJ_T0066692.1 MGP_LPJ_G0028472.1 mouse_genomes_project 4 109619524 109627584 + Cc2d1b protein_coding retained_intron MGP_LPJ_T0066693.1 MGP_LPJ_G0028472.1 mouse_genomes_project 4 109623066 109623879 + Cc2d1b protein_coding retained_intron MGP_LPJ_T0066694.1 MGP_LPJ_G0028472.1 mouse_genomes_project 4 109623100 109623910 + Cc2d1b protein_coding processed_transcript MGP_LPJ_T0066695.1 MGP_LPJ_G0028472.1 mouse_genomes_project 4 109623926 109626742 + Cc2d1b protein_coding retained_intron MGP_LPJ_T0004478.1 MGP_LPJ_G0003901.1 mouse_genomes_project 4 45622048 45632943 - Gm12426 antisense antisense MGP_LPJ_T0004476.1 MGP_LPJ_G0003900.1 mouse_genomes_project 4 44648522 44696534 - Gm12446 antisense antisense MGP_LPJ_T0004477.1 MGP_LPJ_G0003900.1 mouse_genomes_project 4 44680756 44700468 - Gm12446 antisense antisense MGP_LPJ_T0010620.1 MGP_LPJ_G0008738.1 mouse_genomes_project 4 80850990 80851086 + Gm27452 miRNA miRNA MGP_LPJ_T0014680.1 MGP_LPJ_G0012771.1 mouse_genomes_project 4 118068493 118069296 - processed_pseudogene processed_pseudogene MGP_LPJ_T0066364.1 MGP_LPJ_G0028411.1 mouse_genomes_project 4 102562292 102564815 + MGP_LPJ_P0066364 protein_coding protein_coding MGP_LPJ_T0065556.1 MGP_LPJ_G0028203.1 mouse_genomes_project 4 48240528 48243806 - MGP_LPJ_P0065556 Ppp3r2 protein_coding protein_coding MGP_LPJ_T0018012.1 MGP_LPJ_G0015473.1 mouse_genomes_project 4 94836074 94852978 - Gm12655 processed_transcript processed_transcript MGP_LPJ_T0018013.1 MGP_LPJ_G0015473.1 mouse_genomes_project 4 94837168 94852965 - Gm12655 processed_transcript processed_transcript MGP_LPJ_T0004587.1 MGP_LPJ_G0003984.1 mouse_genomes_project 4 142068954 142074205 - Gm16287 antisense antisense MGP_LPJ_T0064646.1 MGP_LPJ_G0028002.1 mouse_genomes_project 4 15886567 16188001 - MGP_LPJ_P0064646 Cnbd1 protein_coding protein_coding MGP_LPJ_T0004536.1 MGP_LPJ_G0003943.1 mouse_genomes_project 4 118133074 118133921 - 1700021J08Rik antisense antisense MGP_LPJ_T0010641.1 MGP_LPJ_G0008759.1 mouse_genomes_project 4 126580530 126580639 + Mir697 miRNA miRNA MGP_LPJ_T0068390.1 MGP_LPJ_G0028850.1 mouse_genomes_project 4 137738778 137799574 - MGP_LPJ_P0068390 Clic4 protein_coding protein_coding MGP_LPJ_T0068391.1 MGP_LPJ_G0028850.1 mouse_genomes_project 4 137747526 137799574 - Clic4 protein_coding retained_intron MGP_LPJ_T0069674.1 MGP_LPJ_G0029140.1 mouse_genomes_project 4 160190231 160192076 - Pusl1 protein_coding processed_transcript MGP_LPJ_T0069676.1 MGP_LPJ_G0029140.1 mouse_genomes_project 4 160191214 160194338 - MGP_LPJ_P0069676 Pusl1 protein_coding protein_coding MGP_LPJ_T0069677.1 MGP_LPJ_G0029140.1 mouse_genomes_project 4 160192942 160193766 - Pusl1 protein_coding retained_intron MGP_LPJ_T0069678.1 MGP_LPJ_G0029140.1 mouse_genomes_project 4 160193053 160194283 - Pusl1 protein_coding retained_intron MGP_LPJ_T0069679.1 MGP_LPJ_G0029140.1 mouse_genomes_project 4 160193337 160194312 - Pusl1 protein_coding retained_intron MGP_LPJ_T0069680.1 MGP_LPJ_G0029140.1 mouse_genomes_project 4 160193398 160194326 - Pusl1 protein_coding processed_transcript MGP_LPJ_T0069681.1 MGP_LPJ_G0029140.1 mouse_genomes_project 4 160193608 160194285 - Pusl1 protein_coding retained_intron MGP_LPJ_T0004462.1 MGP_LPJ_G0003888.1 mouse_genomes_project 4 39544552 39546970 + Fam219aos antisense antisense MGP_LPJ_T0065533.1 MGP_LPJ_G0028196.1 mouse_genomes_project 4 48052205 48065797 - MGP_LPJ_P0065533 Baat protein_coding protein_coding MGP_LPJ_T0065534.1 MGP_LPJ_G0028196.1 mouse_genomes_project 4 48052603 48062444 - MGP_LPJ_P0065534 Baat protein_coding protein_coding MGP_LPJ_T0014382.1 MGP_LPJ_G0012473.1 mouse_genomes_project 4 12753248 12757255 - processed_pseudogene processed_pseudogene MGP_LPJ_T0067463.1 MGP_LPJ_G0028649.1 mouse_genomes_project 4 124904873 124919685 + MGP_LPJ_P0067463 Nt5c1a protein_coding protein_coding MGP_LPJ_T0102167.1 MGP_LPJ_G0040204.1 mouse_genomes_project 4 146661898 146662968 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0065668.1 MGP_LPJ_G0028235.1 mouse_genomes_project 4 56833964 56840976 - MGP_LPJ_P0065668 D630039A03Rik protein_coding protein_coding MGP_LPJ_T0007952.1 MGP_LPJ_G0006501.1 mouse_genomes_project 4 125681183 125687394 - Gm26606 lincRNA lincRNA MGP_LPJ_T0064934.1 MGP_LPJ_G0028074.1 mouse_genomes_project 4 38951680 39006781 + MGP_LPJ_P0064934 Nfx1 protein_coding protein_coding MGP_LPJ_T0064935.1 MGP_LPJ_G0028074.1 mouse_genomes_project 4 38951680 38993402 + MGP_LPJ_P0064935 Nfx1 protein_coding protein_coding MGP_LPJ_T0064936.1 MGP_LPJ_G0028074.1 mouse_genomes_project 4 38951680 38994665 + MGP_LPJ_P0064936 Nfx1 protein_coding protein_coding MGP_LPJ_T0064937.1 MGP_LPJ_G0028074.1 mouse_genomes_project 4 38983287 38992963 + Nfx1 protein_coding processed_transcript MGP_LPJ_T0064938.1 MGP_LPJ_G0028074.1 mouse_genomes_project 4 38990000 39003112 + Nfx1 protein_coding processed_transcript MGP_LPJ_T0064939.1 MGP_LPJ_G0028074.1 mouse_genomes_project 4 39002157 39005966 + Nfx1 protein_coding processed_transcript MGP_LPJ_T0064940.1 MGP_LPJ_G0028074.1 mouse_genomes_project 4 39003991 39005328 + Nfx1 protein_coding processed_transcript MGP_LPJ_T0069174.1 MGP_LPJ_G0029048.1 mouse_genomes_project 4 153528948 153551593 - MGP_LPJ_P0069174 Tmem201 protein_coding protein_coding MGP_LPJ_T0069175.1 MGP_LPJ_G0029048.1 mouse_genomes_project 4 153528956 153551593 - MGP_LPJ_P0069175 Tmem201 protein_coding protein_coding MGP_LPJ_T0069176.1 MGP_LPJ_G0029048.1 mouse_genomes_project 4 153538402 153544235 - Tmem201 protein_coding retained_intron MGP_LPJ_T0069177.1 MGP_LPJ_G0029048.1 mouse_genomes_project 4 153538402 153551593 - MGP_LPJ_P0069177 Tmem201 protein_coding protein_coding MGP_LPJ_T0069178.1 MGP_LPJ_G0029048.1 mouse_genomes_project 4 153542328 153551547 - Tmem201 protein_coding retained_intron MGP_LPJ_T0069179.1 MGP_LPJ_G0029048.1 mouse_genomes_project 4 153544711 153551319 - Tmem201 protein_coding processed_transcript MGP_LPJ_T0067817.1 MGP_LPJ_G0028735.1 mouse_genomes_project 4 131662565 131689068 + MGP_LPJ_P0067817 Bsdc1 protein_coding protein_coding MGP_LPJ_T0067818.1 MGP_LPJ_G0028735.1 mouse_genomes_project 4 131662656 131667987 + Bsdc1 protein_coding processed_transcript MGP_LPJ_T0067819.1 MGP_LPJ_G0028735.1 mouse_genomes_project 4 131662668 131671166 + Bsdc1 protein_coding retained_intron MGP_LPJ_T0067820.1 MGP_LPJ_G0028735.1 mouse_genomes_project 4 131662668 131667975 + Bsdc1 protein_coding processed_transcript MGP_LPJ_T0067821.1 MGP_LPJ_G0028735.1 mouse_genomes_project 4 131662671 131666960 + Bsdc1 protein_coding retained_intron MGP_LPJ_T0067822.1 MGP_LPJ_G0028735.1 mouse_genomes_project 4 131662820 131667987 + MGP_LPJ_P0067822 Bsdc1 protein_coding protein_coding MGP_LPJ_T0067823.1 MGP_LPJ_G0028735.1 mouse_genomes_project 4 131665540 131666539 + Bsdc1 protein_coding processed_transcript MGP_LPJ_T0067824.1 MGP_LPJ_G0028735.1 mouse_genomes_project 4 131672882 131674728 + Bsdc1 protein_coding retained_intron MGP_LPJ_T0067891.1 MGP_LPJ_G0028747.1 mouse_genomes_project 4 131844424 131885721 - MGP_LPJ_P0067891 Txlna protein_coding protein_coding MGP_LPJ_T0067892.1 MGP_LPJ_G0028747.1 mouse_genomes_project 4 131844429 131885298 - Txlna protein_coding retained_intron MGP_LPJ_T0067893.1 MGP_LPJ_G0028747.1 mouse_genomes_project 4 131844429 131885461 - MGP_LPJ_P0067893 Txlna protein_coding protein_coding MGP_LPJ_T0067894.1 MGP_LPJ_G0028747.1 mouse_genomes_project 4 131850508 131885721 - MGP_LPJ_P0067894 Txlna protein_coding protein_coding MGP_LPJ_T0067895.1 MGP_LPJ_G0028747.1 mouse_genomes_project 4 131852723 131885634 - MGP_LPJ_P0067895 Txlna protein_coding protein_coding MGP_LPJ_T0067896.1 MGP_LPJ_G0028747.1 mouse_genomes_project 4 131852739 131885615 - MGP_LPJ_P0067896 Txlna protein_coding protein_coding MGP_LPJ_T0067897.1 MGP_LPJ_G0028747.1 mouse_genomes_project 4 131884119 131885616 - MGP_LPJ_P0067897 Txlna protein_coding protein_coding MGP_LPJ_T0068838.1 MGP_LPJ_G0028956.1 mouse_genomes_project 4 144480642 144492014 - MGP_LPJ_P0068838 Clcnkb protein_coding protein_coding MGP_LPJ_T0068839.1 MGP_LPJ_G0028956.1 mouse_genomes_project 4 144480642 144492014 - MGP_LPJ_P0068839 Clcnkb protein_coding protein_coding MGP_LPJ_T0068840.1 MGP_LPJ_G0028956.1 mouse_genomes_project 4 144480642 144481662 - MGP_LPJ_P0068840 Clcnkb protein_coding protein_coding MGP_LPJ_T0068841.1 MGP_LPJ_G0028956.1 mouse_genomes_project 4 144490299 144491961 - Clcnkb protein_coding processed_transcript MGP_LPJ_T0069601.1 MGP_LPJ_G0029123.1 mouse_genomes_project 4 159917113 159919843 - MGP_LPJ_P0069601 Mmp23 protein_coding protein_coding MGP_LPJ_T0069602.1 MGP_LPJ_G0029123.1 mouse_genomes_project 4 159917115 159918484 - Mmp23 protein_coding retained_intron MGP_LPJ_T0069603.1 MGP_LPJ_G0029123.1 mouse_genomes_project 4 159918711 159919666 - Mmp23 protein_coding retained_intron MGP_LPJ_T0069604.1 MGP_LPJ_G0029123.1 mouse_genomes_project 4 159918728 159919351 - Mmp23 protein_coding retained_intron MGP_LPJ_T0066367.1 MGP_LPJ_G0028414.1 mouse_genomes_project 4 102751486 103312714 + MGP_LPJ_P0066367 Pde4b protein_coding protein_coding MGP_LPJ_T0066368.1 MGP_LPJ_G0028414.1 mouse_genomes_project 4 102751668 102863431 + Pde4b protein_coding retained_intron MGP_LPJ_T0066369.1 MGP_LPJ_G0028414.1 mouse_genomes_project 4 102751684 103258935 + MGP_LPJ_P0066369 Pde4b protein_coding nonsense_mediated_decay MGP_LPJ_T0066370.1 MGP_LPJ_G0028414.1 mouse_genomes_project 4 102927062 103257262 + MGP_LPJ_P0066370 Pde4b protein_coding protein_coding MGP_LPJ_T0066371.1 MGP_LPJ_G0028414.1 mouse_genomes_project 4 102927323 103314140 + MGP_LPJ_P0066371 Pde4b protein_coding protein_coding MGP_LPJ_T0066372.1 MGP_LPJ_G0028414.1 mouse_genomes_project 4 102927550 103205325 + MGP_LPJ_P0066372 Pde4b protein_coding nonsense_mediated_decay MGP_LPJ_T0066373.1 MGP_LPJ_G0028414.1 mouse_genomes_project 4 103110646 103312417 + MGP_LPJ_P0066373 Pde4b protein_coding protein_coding MGP_LPJ_T0066374.1 MGP_LPJ_G0028414.1 mouse_genomes_project 4 103119175 103243851 + MGP_LPJ_P0066374 Pde4b protein_coding protein_coding MGP_LPJ_T0066375.1 MGP_LPJ_G0028414.1 mouse_genomes_project 4 103164915 103184650 + Pde4b protein_coding retained_intron MGP_LPJ_T0066376.1 MGP_LPJ_G0028414.1 mouse_genomes_project 4 103272793 103312728 + MGP_LPJ_P0066376 Pde4b protein_coding protein_coding MGP_LPJ_T0066377.1 MGP_LPJ_G0028414.1 mouse_genomes_project 4 103291568 103312584 + MGP_LPJ_P0066377 Pde4b protein_coding protein_coding MGP_LPJ_T0066378.1 MGP_LPJ_G0028414.1 mouse_genomes_project 4 103293733 103312742 + MGP_LPJ_P0066378 Pde4b protein_coding protein_coding MGP_LPJ_T0066379.1 MGP_LPJ_G0028414.1 mouse_genomes_project 4 103293853 103307437 + MGP_LPJ_P0066379 Pde4b protein_coding protein_coding MGP_LPJ_T0067505.1 MGP_LPJ_G0028660.1 mouse_genomes_project 4 125701883 125702402 - MGP_LPJ_P0067505 4930535I16Rik protein_coding protein_coding MGP_LPJ_T0004543.1 MGP_LPJ_G0003949.1 mouse_genomes_project 4 120224989 120225635 - Gm12863 antisense antisense MGP_LPJ_T0067420.1 MGP_LPJ_G0028634.1 mouse_genomes_project 4 122587961 122626297 - MGP_LPJ_P0067420 Rlf protein_coding protein_coding MGP_LPJ_T0067421.1 MGP_LPJ_G0028634.1 mouse_genomes_project 4 122588472 122654090 - MGP_LPJ_P0067421 Rlf protein_coding protein_coding MGP_LPJ_T0067422.1 MGP_LPJ_G0028634.1 mouse_genomes_project 4 122614387 122626297 - MGP_LPJ_P0067422 Rlf protein_coding protein_coding MGP_LPJ_T0102137.1 MGP_LPJ_G0040174.1 mouse_genomes_project 4 73491241 73491937 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0066125.1 MGP_LPJ_G0028350.1 mouse_genomes_project 4 89047729 89048298 + MGP_LPJ_P0066125 protein_coding protein_coding MGP_LPJ_T0100800.1 MGP_LPJ_G0039063.1 mouse_genomes_project 4 128854481 128854614 - Gm25604 snoRNA snoRNA MGP_LPJ_T0018043.1 MGP_LPJ_G0015492.1 mouse_genomes_project 4 128284741 128286379 + Gm12945 processed_transcript processed_transcript MGP_LPJ_T0011570.1 MGP_LPJ_G0009688.1 mouse_genomes_project 4 15731560 15731848 + Gm25971 misc_RNA misc_RNA MGP_LPJ_T0004455.1 MGP_LPJ_G0003883.1 mouse_genomes_project 4 26245245 26246025 - Gm11915 antisense antisense MGP_LPJ_T0068490.1 MGP_LPJ_G0028870.1 mouse_genomes_project 4 138758467 138760364 + MGP_LPJ_P0068490 Id3 protein_coding protein_coding MGP_LPJ_T0068491.1 MGP_LPJ_G0028870.1 mouse_genomes_project 4 138758835 138759688 + Id3 protein_coding retained_intron MGP_LPJ_T0068492.1 MGP_LPJ_G0028870.1 mouse_genomes_project 4 138759945 138760727 + Id3 protein_coding processed_transcript MGP_LPJ_T0067825.1 MGP_LPJ_G0028736.1 mouse_genomes_project 4 131689583 131691592 - MGP_LPJ_P0067825 Tssk3 protein_coding protein_coding MGP_LPJ_T0004541.1 MGP_LPJ_G0003947.1 mouse_genomes_project 4 119172767 119191607 + 9530034E10Rik antisense antisense MGP_LPJ_T0014546.1 MGP_LPJ_G0012637.1 mouse_genomes_project 4 69443988 69445099 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014600.1 MGP_LPJ_G0012691.1 mouse_genomes_project 4 90611990 90613692 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065765.1 MGP_LPJ_G0028263.1 mouse_genomes_project 4 61659787 61675284 - MGP_LPJ_P0065765 Cdc26 protein_coding protein_coding MGP_LPJ_T0065766.1 MGP_LPJ_G0028263.1 mouse_genomes_project 4 61659838 61675267 - MGP_LPJ_P0065766 Cdc26 protein_coding protein_coding MGP_LPJ_T0065767.1 MGP_LPJ_G0028263.1 mouse_genomes_project 4 61667475 61672170 - Cdc26 protein_coding retained_intron MGP_LPJ_T0068271.1 MGP_LPJ_G0028823.1 mouse_genomes_project 4 136519810 136545053 + MGP_LPJ_P0068271 Ubxn11 protein_coding protein_coding MGP_LPJ_T0068272.1 MGP_LPJ_G0028823.1 mouse_genomes_project 4 136519815 136543461 + Ubxn11 protein_coding processed_transcript MGP_LPJ_T0068273.1 MGP_LPJ_G0028823.1 mouse_genomes_project 4 136519848 136544070 + Ubxn11 protein_coding processed_transcript MGP_LPJ_T0068274.1 MGP_LPJ_G0028823.1 mouse_genomes_project 4 136519860 136545071 + Ubxn11 protein_coding processed_transcript MGP_LPJ_T0068275.1 MGP_LPJ_G0028823.1 mouse_genomes_project 4 136519863 136534442 + MGP_LPJ_P0068275 Ubxn11 protein_coding protein_coding MGP_LPJ_T0068276.1 MGP_LPJ_G0028823.1 mouse_genomes_project 4 136519864 136527718 + Ubxn11 protein_coding processed_transcript MGP_LPJ_T0068277.1 MGP_LPJ_G0028823.1 mouse_genomes_project 4 136525872 136531256 + Ubxn11 protein_coding processed_transcript MGP_LPJ_T0068278.1 MGP_LPJ_G0028823.1 mouse_genomes_project 4 136530836 136541894 + Ubxn11 protein_coding processed_transcript MGP_LPJ_T0068279.1 MGP_LPJ_G0028823.1 mouse_genomes_project 4 136541764 136545070 + Ubxn11 protein_coding processed_transcript MGP_LPJ_T0068280.1 MGP_LPJ_G0028823.1 mouse_genomes_project 4 136542346 136544796 + MGP_LPJ_P0068280 Ubxn11 protein_coding protein_coding MGP_LPJ_T0068281.1 MGP_LPJ_G0028823.1 mouse_genomes_project 4 136544222 136545071 + Ubxn11 protein_coding processed_transcript MGP_LPJ_T0067178.1 MGP_LPJ_G0028572.1 mouse_genomes_project 4 119080031 119083421 - MGP_LPJ_P0067178 Dph2 protein_coding protein_coding MGP_LPJ_T0067179.1 MGP_LPJ_G0028572.1 mouse_genomes_project 4 119080295 119083409 - Dph2 protein_coding retained_intron MGP_LPJ_T0067180.1 MGP_LPJ_G0028572.1 mouse_genomes_project 4 119080304 119083412 - MGP_LPJ_P0067180 Dph2 protein_coding nonsense_mediated_decay MGP_LPJ_T0067181.1 MGP_LPJ_G0028572.1 mouse_genomes_project 4 119082466 119083375 - Dph2 protein_coding retained_intron MGP_LPJ_T0068744.1 MGP_LPJ_G0028934.1 mouse_genomes_project 4 142898875 142906937 - MGP_LPJ_P0068744 Klhdc7a protein_coding protein_coding MGP_LPJ_T0067704.1 MGP_LPJ_G0028709.1 mouse_genomes_project 4 129362883 129366808 - MGP_LPJ_P0067704 Gjb3 protein_coding protein_coding MGP_LPJ_T0067705.1 MGP_LPJ_G0028709.1 mouse_genomes_project 4 129362883 129368491 - MGP_LPJ_P0067705 Gjb3 protein_coding protein_coding MGP_LPJ_T0014628.1 MGP_LPJ_G0012719.1 mouse_genomes_project 4 99974722 99975119 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014719.1 MGP_LPJ_G0012810.1 mouse_genomes_project 4 128443804 128444120 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010630.1 MGP_LPJ_G0008748.1 mouse_genomes_project 4 108331265 108331350 + Gm24804 miRNA miRNA MGP_LPJ_T0004570.1 MGP_LPJ_G0003970.1 mouse_genomes_project 4 134822938 134828942 - Gm12981 antisense antisense MGP_LPJ_T0066497.1 MGP_LPJ_G0028442.1 mouse_genomes_project 4 107769514 107896107 + Ssbp3 protein_coding processed_transcript MGP_LPJ_T0066498.1 MGP_LPJ_G0028442.1 mouse_genomes_project 4 107770283 107915813 + MGP_LPJ_P0066498 Ssbp3 protein_coding protein_coding MGP_LPJ_T0066499.1 MGP_LPJ_G0028442.1 mouse_genomes_project 4 107770324 107903782 + MGP_LPJ_P0066499 Ssbp3 protein_coding protein_coding MGP_LPJ_T0066500.1 MGP_LPJ_G0028442.1 mouse_genomes_project 4 107770346 107914686 + MGP_LPJ_P0066500 Ssbp3 protein_coding protein_coding MGP_LPJ_T0066501.1 MGP_LPJ_G0028442.1 mouse_genomes_project 4 107770480 107914618 + MGP_LPJ_P0066501 Ssbp3 protein_coding protein_coding MGP_LPJ_T0066502.1 MGP_LPJ_G0028442.1 mouse_genomes_project 4 107770680 107875624 + Ssbp3 protein_coding processed_transcript MGP_LPJ_T0066503.1 MGP_LPJ_G0028442.1 mouse_genomes_project 4 107771117 107914635 + Ssbp3 protein_coding processed_transcript MGP_LPJ_T0066504.1 MGP_LPJ_G0028442.1 mouse_genomes_project 4 107781994 107896059 + Ssbp3 protein_coding processed_transcript MGP_LPJ_T0066505.1 MGP_LPJ_G0028442.1 mouse_genomes_project 4 107782034 107903288 + Ssbp3 protein_coding processed_transcript MGP_LPJ_T0066506.1 MGP_LPJ_G0028442.1 mouse_genomes_project 4 107801815 107914663 + Ssbp3 protein_coding processed_transcript MGP_LPJ_T0066507.1 MGP_LPJ_G0028442.1 mouse_genomes_project 4 107817839 107914811 + Ssbp3 protein_coding processed_transcript MGP_LPJ_T0066508.1 MGP_LPJ_G0028442.1 mouse_genomes_project 4 107830176 107896105 + MGP_LPJ_P0066508 Ssbp3 protein_coding protein_coding MGP_LPJ_T0066509.1 MGP_LPJ_G0028442.1 mouse_genomes_project 4 107893232 107902403 + Ssbp3 protein_coding processed_transcript MGP_LPJ_T0066510.1 MGP_LPJ_G0028442.1 mouse_genomes_project 4 107895869 107896523 + Ssbp3 protein_coding processed_transcript MGP_LPJ_T0066511.1 MGP_LPJ_G0028442.1 mouse_genomes_project 4 107903241 107914639 + Ssbp3 protein_coding processed_transcript MGP_LPJ_T0066512.1 MGP_LPJ_G0028442.1 mouse_genomes_project 4 107903272 107905697 + Ssbp3 protein_coding processed_transcript MGP_LPJ_T0066513.1 MGP_LPJ_G0028442.1 mouse_genomes_project 4 107913073 107914570 + Ssbp3 protein_coding processed_transcript MGP_LPJ_T0014638.1 MGP_LPJ_G0012729.1 mouse_genomes_project 4 102505174 102505894 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010665.1 MGP_LPJ_G0008783.1 mouse_genomes_project 4 142241938 142241995 + Gm24245 miRNA miRNA MGP_LPJ_T0065568.1 MGP_LPJ_G0028207.1 mouse_genomes_project 4 51540674 51541634 + MGP_LPJ_P0065568 Olfr275 protein_coding protein_coding MGP_LPJ_T0065720.1 MGP_LPJ_G0028250.1 mouse_genomes_project 4 58312137 58313421 - Susd1 protein_coding retained_intron MGP_LPJ_T0065721.1 MGP_LPJ_G0028250.1 mouse_genomes_project 4 58312137 58434838 - MGP_LPJ_P0065721 Susd1 protein_coding protein_coding MGP_LPJ_T0065722.1 MGP_LPJ_G0028250.1 mouse_genomes_project 4 58312208 58434838 - MGP_LPJ_P0065722 Susd1 protein_coding protein_coding MGP_LPJ_T0065723.1 MGP_LPJ_G0028250.1 mouse_genomes_project 4 58326660 58330422 - Susd1 protein_coding retained_intron MGP_LPJ_T0065724.1 MGP_LPJ_G0028250.1 mouse_genomes_project 4 58329356 58355146 - Susd1 protein_coding retained_intron MGP_LPJ_T0011598.1 MGP_LPJ_G0009716.1 mouse_genomes_project 4 135531040 135531328 - Gm24636 misc_RNA misc_RNA MGP_LPJ_T0065554.1 MGP_LPJ_G0028202.1 mouse_genomes_project 4 48223391 48416378 - MGP_LPJ_P0065554 Grin3a protein_coding protein_coding MGP_LPJ_T0065555.1 MGP_LPJ_G0028202.1 mouse_genomes_project 4 48223391 48416378 - MGP_LPJ_P0065555 Grin3a protein_coding protein_coding MGP_LPJ_T0065557.1 MGP_LPJ_G0028202.1 mouse_genomes_project 4 48266027 48281071 - Grin3a protein_coding processed_transcript MGP_LPJ_T0065558.1 MGP_LPJ_G0028202.1 mouse_genomes_project 4 48333725 48416573 - Grin3a protein_coding processed_transcript MGP_LPJ_T0069229.1 MGP_LPJ_G0029060.1 mouse_genomes_project 4 154850798 154869233 - MGP_LPJ_P0069229 Park7 protein_coding protein_coding MGP_LPJ_T0069230.1 MGP_LPJ_G0029060.1 mouse_genomes_project 4 154850798 154864110 - MGP_LPJ_P0069230 Park7 protein_coding protein_coding MGP_LPJ_T0069231.1 MGP_LPJ_G0029060.1 mouse_genomes_project 4 154850810 154863810 - MGP_LPJ_P0069231 Park7 protein_coding protein_coding MGP_LPJ_T0069232.1 MGP_LPJ_G0029060.1 mouse_genomes_project 4 154850901 154862597 - MGP_LPJ_P0069232 Park7 protein_coding protein_coding MGP_LPJ_T0069233.1 MGP_LPJ_G0029060.1 mouse_genomes_project 4 154850904 154863835 - MGP_LPJ_P0069233 Park7 protein_coding protein_coding MGP_LPJ_T0069234.1 MGP_LPJ_G0029060.1 mouse_genomes_project 4 154851049 154855525 - Park7 protein_coding processed_transcript MGP_LPJ_T0069235.1 MGP_LPJ_G0029060.1 mouse_genomes_project 4 154854695 154863667 - MGP_LPJ_P0069235 Park7 protein_coding protein_coding MGP_LPJ_T0069236.1 MGP_LPJ_G0029060.1 mouse_genomes_project 4 154857251 154864012 - Park7 protein_coding retained_intron MGP_LPJ_T0069237.1 MGP_LPJ_G0029060.1 mouse_genomes_project 4 154859307 154864052 - MGP_LPJ_P0069237 Park7 protein_coding protein_coding MGP_LPJ_T0069238.1 MGP_LPJ_G0029060.1 mouse_genomes_project 4 154859431 154869002 - MGP_LPJ_P0069238 Park7 protein_coding protein_coding MGP_LPJ_T0068282.1 MGP_LPJ_G0028824.1 mouse_genomes_project 4 136545701 136547085 - MGP_LPJ_P0068282 Sh3bgrl3 protein_coding protein_coding MGP_LPJ_T0068283.1 MGP_LPJ_G0028824.1 mouse_genomes_project 4 136545708 136547035 - MGP_LPJ_P0068283 Sh3bgrl3 protein_coding protein_coding MGP_LPJ_T0068284.1 MGP_LPJ_G0028824.1 mouse_genomes_project 4 136546135 136547033 - Sh3bgrl3 protein_coding retained_intron MGP_LPJ_T0068735.1 MGP_LPJ_G0028929.1 mouse_genomes_project 4 142503020 142545248 + MGP_LPJ_P0068735 Iffo2 protein_coding protein_coding MGP_LPJ_T0066155.1 MGP_LPJ_G0028362.1 mouse_genomes_project 4 94936368 94936901 + MGP_LPJ_P0066155 Gm10306 protein_coding protein_coding MGP_LPJ_T0007973.1 MGP_LPJ_G0006513.1 mouse_genomes_project 4 130772996 130773973 + Gm12958 lincRNA lincRNA MGP_LPJ_T0018017.1 MGP_LPJ_G0015477.1 mouse_genomes_project 4 96371900 96385219 - processed_transcript processed_transcript MGP_LPJ_T0018018.1 MGP_LPJ_G0015477.1 mouse_genomes_project 4 96372435 96384599 - processed_transcript processed_transcript MGP_LPJ_T0007847.1 MGP_LPJ_G0006416.1 mouse_genomes_project 4 41196263 41202992 + Gm26881 lincRNA lincRNA MGP_LPJ_T0008029.1 MGP_LPJ_G0006552.1 mouse_genomes_project 4 143896854 143904138 + 4930515B02Rik lincRNA lincRNA MGP_LPJ_T0100772.1 MGP_LPJ_G0039035.1 mouse_genomes_project 4 73233207 73233340 - Gm24170 snoRNA snoRNA MGP_LPJ_T0067316.1 MGP_LPJ_G0028609.1 mouse_genomes_project 4 120630174 120667600 - Ccdc30 protein_coding retained_intron MGP_LPJ_T0067317.1 MGP_LPJ_G0028609.1 mouse_genomes_project 4 120631124 120728922 - MGP_LPJ_P0067317 Ccdc30 protein_coding protein_coding MGP_LPJ_T0067318.1 MGP_LPJ_G0028609.1 mouse_genomes_project 4 120647477 120660996 - Ccdc30 protein_coding retained_intron MGP_LPJ_T0067319.1 MGP_LPJ_G0028609.1 mouse_genomes_project 4 120660141 120694227 - MGP_LPJ_P0067319 Ccdc30 protein_coding protein_coding MGP_LPJ_T0067320.1 MGP_LPJ_G0028609.1 mouse_genomes_project 4 120660142 120667393 - Ccdc30 protein_coding processed_transcript MGP_LPJ_T0067321.1 MGP_LPJ_G0028609.1 mouse_genomes_project 4 120660526 120728722 - MGP_LPJ_P0067321 Ccdc30 protein_coding unknown_likely_coding MGP_LPJ_T0067322.1 MGP_LPJ_G0028609.1 mouse_genomes_project 4 120661085 120704270 - MGP_LPJ_P0067322 Ccdc30 protein_coding protein_coding MGP_LPJ_T0067323.1 MGP_LPJ_G0028609.1 mouse_genomes_project 4 120667504 120687321 - Ccdc30 protein_coding processed_transcript MGP_LPJ_T0067324.1 MGP_LPJ_G0028609.1 mouse_genomes_project 4 120675398 120694301 - Ccdc30 protein_coding processed_transcript MGP_LPJ_T0067325.1 MGP_LPJ_G0028609.1 mouse_genomes_project 4 120675400 120689284 - Ccdc30 protein_coding retained_intron MGP_LPJ_T0067326.1 MGP_LPJ_G0028609.1 mouse_genomes_project 4 120675408 120694227 - MGP_LPJ_P0067326 Ccdc30 protein_coding protein_coding MGP_LPJ_T0067327.1 MGP_LPJ_G0028609.1 mouse_genomes_project 4 120683569 120694213 - Ccdc30 protein_coding retained_intron MGP_LPJ_T0067328.1 MGP_LPJ_G0028609.1 mouse_genomes_project 4 120703485 120712940 - Ccdc30 protein_coding processed_transcript MGP_LPJ_T0004595.1 MGP_LPJ_G0003991.1 mouse_genomes_project 4 144717862 144719437 + AI507597 antisense antisense MGP_LPJ_T0004596.1 MGP_LPJ_G0003991.1 mouse_genomes_project 4 144718190 144719437 + AI507597 antisense antisense MGP_LPJ_T0014386.1 MGP_LPJ_G0012477.1 mouse_genomes_project 4 13184405 13185653 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007986.1 MGP_LPJ_G0006521.1 mouse_genomes_project 4 132963302 132967735 - Gm26516 lincRNA lincRNA MGP_LPJ_T0100760.1 MGP_LPJ_G0039023.1 mouse_genomes_project 4 54266262 54266396 - Gm22150 snoRNA snoRNA MGP_LPJ_T0064933.1 MGP_LPJ_G0028073.1 mouse_genomes_project 4 38926857 38945428 + MGP_LPJ_P0064933 Chmp5 protein_coding protein_coding MGP_LPJ_T0004471.1 MGP_LPJ_G0003896.1 mouse_genomes_project 4 43234421 43237746 + Gm12493 antisense antisense MGP_LPJ_T0069632.1 MGP_LPJ_G0029132.1 mouse_genomes_project 4 160098298 160099069 + Mrpl20 protein_coding processed_transcript MGP_LPJ_T0069633.1 MGP_LPJ_G0029132.1 mouse_genomes_project 4 160098947 160104500 + MGP_LPJ_P0069633 Mrpl20 protein_coding protein_coding MGP_LPJ_T0069634.1 MGP_LPJ_G0029132.1 mouse_genomes_project 4 160099073 160104467 + MGP_LPJ_P0069634 Mrpl20 protein_coding protein_coding MGP_LPJ_T0069635.1 MGP_LPJ_G0029132.1 mouse_genomes_project 4 160099076 160105652 + MGP_LPJ_P0069635 Mrpl20 protein_coding nonsense_mediated_decay MGP_LPJ_T0069636.1 MGP_LPJ_G0029132.1 mouse_genomes_project 4 160099078 160102828 + MGP_LPJ_P0069636 Mrpl20 protein_coding protein_coding MGP_LPJ_T0069637.1 MGP_LPJ_G0029132.1 mouse_genomes_project 4 160099185 160104463 + Mrpl20 protein_coding processed_transcript MGP_LPJ_T0067510.1 MGP_LPJ_G0028662.1 mouse_genomes_project 4 126498051 126501900 + MGP_LPJ_P0067510 Pou3f1 protein_coding protein_coding MGP_LPJ_T0069401.1 MGP_LPJ_G0029089.1 mouse_genomes_project 4 158112569 158119968 - MGP_LPJ_P0069401 Dffb protein_coding unknown_likely_coding MGP_LPJ_T0069402.1 MGP_LPJ_G0029089.1 mouse_genomes_project 4 158112577 158123745 - MGP_LPJ_P0069402 Dffb protein_coding protein_coding MGP_LPJ_T0069403.1 MGP_LPJ_G0029089.1 mouse_genomes_project 4 158117163 158123670 - Dffb protein_coding processed_transcript MGP_LPJ_T0069404.1 MGP_LPJ_G0029089.1 mouse_genomes_project 4 158120520 158123676 - Dffb protein_coding retained_intron MGP_LPJ_T0069405.1 MGP_LPJ_G0029089.1 mouse_genomes_project 4 158120668 158123608 - MGP_LPJ_P0069405 Dffb protein_coding unknown_likely_coding MGP_LPJ_T0069406.1 MGP_LPJ_G0029089.1 mouse_genomes_project 4 158123121 158123700 - Dffb protein_coding retained_intron MGP_LPJ_T0067257.1 MGP_LPJ_G0028592.1 mouse_genomes_project 4 119992597 119993545 + MGP_LPJ_P0067257 Olfr1339 protein_coding protein_coding MGP_LPJ_T0065441.1 MGP_LPJ_G0028171.1 mouse_genomes_project 4 44734364 44747894 - MGP_LPJ_P0065441 Trmo protein_coding nonsense_mediated_decay MGP_LPJ_T0065442.1 MGP_LPJ_G0028171.1 mouse_genomes_project 4 44734838 44747899 - MGP_LPJ_P0065442 Trmo protein_coding protein_coding MGP_LPJ_T0065443.1 MGP_LPJ_G0028171.1 mouse_genomes_project 4 44737727 44747913 - MGP_LPJ_P0065443 Trmo protein_coding protein_coding MGP_LPJ_T0004439.1 MGP_LPJ_G0003871.1 mouse_genomes_project 4 2913788 2919199 - 4930430E12Rik antisense antisense MGP_LPJ_T0004440.1 MGP_LPJ_G0003871.1 mouse_genomes_project 4 2914887 2919199 - 4930430E12Rik antisense antisense MGP_LPJ_T0067102.1 MGP_LPJ_G0028560.1 mouse_genomes_project 4 118303525 118329227 - MGP_LPJ_P0067102 Kif2c protein_coding protein_coding MGP_LPJ_T0067103.1 MGP_LPJ_G0028560.1 mouse_genomes_project 4 118304029 118322664 - MGP_LPJ_P0067103 Kif2c protein_coding protein_coding MGP_LPJ_T0067104.1 MGP_LPJ_G0028560.1 mouse_genomes_project 4 118308563 118309297 - Kif2c protein_coding retained_intron MGP_LPJ_T0067105.1 MGP_LPJ_G0028560.1 mouse_genomes_project 4 118317601 118329130 - Kif2c protein_coding retained_intron MGP_LPJ_T0067106.1 MGP_LPJ_G0028560.1 mouse_genomes_project 4 118317603 118329194 - Kif2c protein_coding processed_transcript MGP_LPJ_T0067107.1 MGP_LPJ_G0028560.1 mouse_genomes_project 4 118318341 118329180 - Kif2c protein_coding retained_intron MGP_LPJ_T0067108.1 MGP_LPJ_G0028560.1 mouse_genomes_project 4 118318882 118322646 - Kif2c protein_coding processed_transcript MGP_LPJ_T0067109.1 MGP_LPJ_G0028560.1 mouse_genomes_project 4 118318925 118322662 - MGP_LPJ_P0067109 Kif2c protein_coding protein_coding MGP_LPJ_T0007855.1 MGP_LPJ_G0006423.1 mouse_genomes_project 4 46456395 46458201 + Gm12434 lincRNA lincRNA MGP_LPJ_T0064730.1 MGP_LPJ_G0028024.1 mouse_genomes_project 4 22141518 22148260 + MGP_LPJ_P0064730 Ndufaf4 protein_coding protein_coding MGP_LPJ_T0064731.1 MGP_LPJ_G0028024.1 mouse_genomes_project 4 22141566 22146748 + Ndufaf4 protein_coding processed_transcript MGP_LPJ_T0018007.1 MGP_LPJ_G0015469.1 mouse_genomes_project 4 85558666 85845061 + processed_transcript processed_transcript MGP_LPJ_T0064885.1 MGP_LPJ_G0028061.1 mouse_genomes_project 4 37376363 37377845 + MGP_LPJ_P0064885 1700009N14Rik protein_coding protein_coding MGP_LPJ_T0069530.1 MGP_LPJ_G0029112.1 mouse_genomes_project 4 159378807 159418471 - Ski protein_coding processed_transcript MGP_LPJ_T0069531.1 MGP_LPJ_G0029112.1 mouse_genomes_project 4 159378807 159452522 - MGP_LPJ_P0069531 Ski protein_coding protein_coding MGP_LPJ_T0069532.1 MGP_LPJ_G0029112.1 mouse_genomes_project 4 159378807 159452579 - MGP_LPJ_P0069532 Ski protein_coding protein_coding MGP_LPJ_T0014653.1 MGP_LPJ_G0012744.1 mouse_genomes_project 4 108206422 108207433 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100771.1 MGP_LPJ_G0039034.1 mouse_genomes_project 4 72746389 72746516 + Gm25769 snoRNA snoRNA MGP_LPJ_T0068842.1 MGP_LPJ_G0028957.1 mouse_genomes_project 4 144496906 144501375 + MGP_LPJ_P0068842 Hspb7 protein_coding protein_coding MGP_LPJ_T0007941.1 MGP_LPJ_G0006490.1 mouse_genomes_project 4 108863224 108870028 + 4930407G08Rik lincRNA lincRNA MGP_LPJ_T0068943.1 MGP_LPJ_G0028989.1 mouse_genomes_project 4 147363038 147369605 - MGP_LPJ_P0068943 protein_coding protein_coding MGP_LPJ_T0069226.1 MGP_LPJ_G0029059.1 mouse_genomes_project 4 154799428 154814351 + MGP_LPJ_P0069226 Errfi1 protein_coding protein_coding MGP_LPJ_T0069227.1 MGP_LPJ_G0029059.1 mouse_genomes_project 4 154800584 154801327 + Errfi1 protein_coding processed_transcript MGP_LPJ_T0069228.1 MGP_LPJ_G0029059.1 mouse_genomes_project 4 154800584 154814346 + MGP_LPJ_P0069228 Errfi1 protein_coding protein_coding MGP_LPJ_T0018010.1 MGP_LPJ_G0015471.1 mouse_genomes_project 4 89597502 89617328 + Gm12609 processed_transcript processed_transcript MGP_LPJ_T0065866.1 MGP_LPJ_G0028291.1 mouse_genomes_project 4 64962742 64973990 + MGP_LPJ_P0065866 Trim32 protein_coding protein_coding MGP_LPJ_T0065867.1 MGP_LPJ_G0028291.1 mouse_genomes_project 4 64962742 64973990 + MGP_LPJ_P0065867 Trim32 protein_coding protein_coding MGP_LPJ_T0065868.1 MGP_LPJ_G0028291.1 mouse_genomes_project 4 64963005 64971368 + MGP_LPJ_P0065868 Trim32 protein_coding protein_coding MGP_LPJ_T0065869.1 MGP_LPJ_G0028291.1 mouse_genomes_project 4 64963005 64971508 + MGP_LPJ_P0065869 Trim32 protein_coding protein_coding MGP_LPJ_T0099537.1 MGP_LPJ_G0037800.1 mouse_genomes_project 4 141434113 141434219 - Gm22961 snRNA snRNA MGP_LPJ_T0100791.1 MGP_LPJ_G0039054.1 mouse_genomes_project 4 118297652 118297756 - Gm26330 snoRNA snoRNA MGP_LPJ_T0067912.1 MGP_LPJ_G0028751.1 mouse_genomes_project 4 132075226 132106062 + Ptp4a2 protein_coding processed_transcript MGP_LPJ_T0067913.1 MGP_LPJ_G0028751.1 mouse_genomes_project 4 132075229 132076531 + Ptp4a2 protein_coding retained_intron MGP_LPJ_T0067914.1 MGP_LPJ_G0028751.1 mouse_genomes_project 4 132085645 132117828 + MGP_LPJ_P0067914 Ptp4a2 protein_coding protein_coding MGP_LPJ_T0067915.1 MGP_LPJ_G0028751.1 mouse_genomes_project 4 132086108 132106026 + Ptp4a2 protein_coding processed_transcript MGP_LPJ_T0067916.1 MGP_LPJ_G0028751.1 mouse_genomes_project 4 132086136 132117853 + MGP_LPJ_P0067916 Ptp4a2 protein_coding protein_coding MGP_LPJ_T0067917.1 MGP_LPJ_G0028751.1 mouse_genomes_project 4 132086149 132106196 + Ptp4a2 protein_coding processed_transcript MGP_LPJ_T0004515.1 MGP_LPJ_G0003928.1 mouse_genomes_project 4 107378400 107381629 - 2700068H02Rik antisense antisense MGP_LPJ_T0004569.1 MGP_LPJ_G0003969.1 mouse_genomes_project 4 133018840 133020760 - Gm26716 antisense antisense MGP_LPJ_T0065036.1 MGP_LPJ_G0028097.1 mouse_genomes_project 4 39821844 39829587 + MGP_LPJ_P0065036 protein_coding protein_coding MGP_LPJ_T0065617.1 MGP_LPJ_G0028223.1 mouse_genomes_project 4 55601378 55602686 + MGP_LPJ_P0065617 Gm26657 protein_coding protein_coding MGP_LPJ_T0014633.1 MGP_LPJ_G0012724.1 mouse_genomes_project 4 101138994 101139934 - processed_pseudogene processed_pseudogene MGP_LPJ_T0067568.1 MGP_LPJ_G0028679.1 mouse_genomes_project 4 127956555 127980220 + MGP_LPJ_P0067568 Csf3r protein_coding protein_coding MGP_LPJ_T0067569.1 MGP_LPJ_G0028679.1 mouse_genomes_project 4 127956731 127963900 + Csf3r protein_coding processed_transcript MGP_LPJ_T0067570.1 MGP_LPJ_G0028679.1 mouse_genomes_project 4 127959342 127980185 + MGP_LPJ_P0067570 Csf3r protein_coding unknown_likely_coding MGP_LPJ_T0065853.1 MGP_LPJ_G0028284.1 mouse_genomes_project 4 62922764 62938014 - MGP_LPJ_P0065853 1700018C11Rik protein_coding protein_coding MGP_LPJ_T0065854.1 MGP_LPJ_G0028284.1 mouse_genomes_project 4 62922764 62938026 - MGP_LPJ_P0065854 1700018C11Rik protein_coding protein_coding MGP_LPJ_T0014758.1 MGP_LPJ_G0012849.1 mouse_genomes_project 4 142249554 142250435 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014709.1 MGP_LPJ_G0012800.1 mouse_genomes_project 4 123429364 123430510 + processed_pseudogene processed_pseudogene MGP_LPJ_T0067908.1 MGP_LPJ_G0028750.1 mouse_genomes_project 4 131958506 132001393 - MGP_LPJ_P0067908 Khdrbs1 protein_coding nonsense_mediated_decay MGP_LPJ_T0067909.1 MGP_LPJ_G0028750.1 mouse_genomes_project 4 131959165 131969218 - Khdrbs1 protein_coding retained_intron MGP_LPJ_T0067910.1 MGP_LPJ_G0028750.1 mouse_genomes_project 4 131969216 132001392 - MGP_LPJ_P0067910 Khdrbs1 protein_coding protein_coding MGP_LPJ_T0067911.1 MGP_LPJ_G0028750.1 mouse_genomes_project 4 131988158 132001399 - Khdrbs1 protein_coding retained_intron MGP_LPJ_T0068358.1 MGP_LPJ_G0028842.1 mouse_genomes_project 4 137036758 137184925 - MGP_LPJ_P0068358 Man1c1 protein_coding protein_coding MGP_LPJ_T0068359.1 MGP_LPJ_G0028842.1 mouse_genomes_project 4 137036758 137184925 - MGP_LPJ_P0068359 Man1c1 protein_coding protein_coding MGP_LPJ_T0068360.1 MGP_LPJ_G0028842.1 mouse_genomes_project 4 137042947 137184402 - Man1c1 protein_coding retained_intron MGP_LPJ_T0067403.1 MGP_LPJ_G0028628.1 mouse_genomes_project 4 122347525 122348354 - MGP_LPJ_P0067403 Exo5 protein_coding protein_coding MGP_LPJ_T0067404.1 MGP_LPJ_G0028628.1 mouse_genomes_project 4 122347525 122351336 - MGP_LPJ_P0067404 Exo5 protein_coding protein_coding MGP_LPJ_T0067405.1 MGP_LPJ_G0028628.1 mouse_genomes_project 4 122347531 122351336 - MGP_LPJ_P0067405 Exo5 protein_coding protein_coding MGP_LPJ_T0067406.1 MGP_LPJ_G0028628.1 mouse_genomes_project 4 122348598 122351348 - MGP_LPJ_P0067406 Exo5 protein_coding protein_coding MGP_LPJ_T0068742.1 MGP_LPJ_G0028933.1 mouse_genomes_project 4 142673834 142770636 - MGP_LPJ_P0068742 Pax7 protein_coding protein_coding MGP_LPJ_T0068743.1 MGP_LPJ_G0028933.1 mouse_genomes_project 4 142677488 142770151 - MGP_LPJ_P0068743 Pax7 protein_coding protein_coding MGP_LPJ_T0068976.1 MGP_LPJ_G0029006.1 mouse_genomes_project 4 148644771 148678938 - MGP_LPJ_P0068976 Tnfrsf1b protein_coding protein_coding MGP_LPJ_T0068977.1 MGP_LPJ_G0029006.1 mouse_genomes_project 4 148656660 148678938 - MGP_LPJ_P0068977 Tnfrsf1b protein_coding nonsense_mediated_decay MGP_LPJ_T0067332.1 MGP_LPJ_G0028611.1 mouse_genomes_project 4 120736178 120768685 + MGP_LPJ_P0067332 Zmynd12 protein_coding protein_coding MGP_LPJ_T0067333.1 MGP_LPJ_G0028611.1 mouse_genomes_project 4 120736236 120765019 + Zmynd12 protein_coding processed_transcript MGP_LPJ_T0067334.1 MGP_LPJ_G0028611.1 mouse_genomes_project 4 120758513 120785591 + Zmynd12 protein_coding processed_transcript MGP_LPJ_T0065857.1 MGP_LPJ_G0028286.1 mouse_genomes_project 4 63050383 63068247 - MGP_LPJ_P0065857 Tnfsf15 protein_coding protein_coding MGP_LPJ_T0014677.1 MGP_LPJ_G0012768.1 mouse_genomes_project 4 117539383 117539800 + processed_pseudogene processed_pseudogene MGP_LPJ_T0068818.1 MGP_LPJ_G0028951.1 mouse_genomes_project 4 144253213 144259194 + MGP_LPJ_P0068818 Rsg1 protein_coding protein_coding MGP_LPJ_T0068819.1 MGP_LPJ_G0028951.1 mouse_genomes_project 4 144253702 144257723 + Rsg1 protein_coding processed_transcript MGP_LPJ_T0068820.1 MGP_LPJ_G0028951.1 mouse_genomes_project 4 144257694 144275533 + Rsg1 protein_coding processed_transcript MGP_LPJ_T0099486.1 MGP_LPJ_G0037749.1 mouse_genomes_project 4 56799635 56799742 - Gm26138 snRNA snRNA MGP_LPJ_T0007885.1 MGP_LPJ_G0006447.1 mouse_genomes_project 4 67473268 67581330 + lincRNA lincRNA MGP_LPJ_T0067255.1 MGP_LPJ_G0028590.1 mouse_genomes_project 4 119967196 119968135 + MGP_LPJ_P0067255 Olfr1341 protein_coding protein_coding MGP_LPJ_T0064824.1 MGP_LPJ_G0028049.1 mouse_genomes_project 4 32240269 32289932 - MGP_LPJ_P0064824 Orc3 protein_coding protein_coding MGP_LPJ_T0064825.1 MGP_LPJ_G0028049.1 mouse_genomes_project 4 32240269 32289901 - MGP_LPJ_P0064825 Orc3 protein_coding protein_coding MGP_LPJ_T0064826.1 MGP_LPJ_G0028049.1 mouse_genomes_project 4 32241038 32272436 - Orc3 protein_coding processed_transcript MGP_LPJ_T0064827.1 MGP_LPJ_G0028049.1 mouse_genomes_project 4 32241871 32246401 - Orc3 protein_coding processed_transcript MGP_LPJ_T0064828.1 MGP_LPJ_G0028049.1 mouse_genomes_project 4 32247147 32289899 - Orc3 protein_coding processed_transcript MGP_LPJ_T0064829.1 MGP_LPJ_G0028049.1 mouse_genomes_project 4 32266217 32268873 - Orc3 protein_coding processed_transcript MGP_LPJ_T0064830.1 MGP_LPJ_G0028049.1 mouse_genomes_project 4 32266743 32289881 - MGP_LPJ_P0064830 Orc3 protein_coding protein_coding MGP_LPJ_T0064831.1 MGP_LPJ_G0028049.1 mouse_genomes_project 4 32272386 32289891 - Orc3 protein_coding processed_transcript MGP_LPJ_T0064832.1 MGP_LPJ_G0028049.1 mouse_genomes_project 4 32272474 32289897 - Orc3 protein_coding processed_transcript MGP_LPJ_T0064833.1 MGP_LPJ_G0028049.1 mouse_genomes_project 4 32273060 32289892 - Orc3 protein_coding processed_transcript MGP_LPJ_T0064597.1 MGP_LPJ_G0027987.1 mouse_genomes_project 4 8990317 9010305 - MGP_LPJ_P0064597 Fam92a protein_coding protein_coding MGP_LPJ_T0064598.1 MGP_LPJ_G0027987.1 mouse_genomes_project 4 8990317 9010285 - MGP_LPJ_P0064598 Fam92a protein_coding protein_coding MGP_LPJ_T0064599.1 MGP_LPJ_G0027987.1 mouse_genomes_project 4 8994032 9009458 - MGP_LPJ_P0064599 Fam92a protein_coding protein_coding MGP_LPJ_T0064600.1 MGP_LPJ_G0027987.1 mouse_genomes_project 4 9002430 9010161 - MGP_LPJ_P0064600 Fam92a protein_coding nonsense_mediated_decay MGP_LPJ_T0064601.1 MGP_LPJ_G0027987.1 mouse_genomes_project 4 9003652 9010285 - Fam92a protein_coding retained_intron MGP_LPJ_T0064602.1 MGP_LPJ_G0027987.1 mouse_genomes_project 4 9003919 9010024 - Fam92a protein_coding retained_intron MGP_LPJ_T0014718.1 MGP_LPJ_G0012809.1 mouse_genomes_project 4 126882181 126882505 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014737.1 MGP_LPJ_G0012828.1 mouse_genomes_project 4 135224574 135226438 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014557.1 MGP_LPJ_G0012648.1 mouse_genomes_project 4 73861014 73862540 + processed_pseudogene processed_pseudogene MGP_LPJ_T0065882.1 MGP_LPJ_G0028295.1 mouse_genomes_project 4 69943559 70061255 - MGP_LPJ_P0065882 Megf9 protein_coding protein_coding MGP_LPJ_T0065883.1 MGP_LPJ_G0028295.1 mouse_genomes_project 4 69987263 70061322 - MGP_LPJ_P0065883 Megf9 protein_coding nonsense_mediated_decay MGP_LPJ_T0068876.1 MGP_LPJ_G0028964.1 mouse_genomes_project 4 144730642 144770905 - MGP_LPJ_P0068876 Plekhm2 protein_coding protein_coding MGP_LPJ_T0068877.1 MGP_LPJ_G0028964.1 mouse_genomes_project 4 144730642 144771686 - MGP_LPJ_P0068877 Plekhm2 protein_coding protein_coding MGP_LPJ_T0068878.1 MGP_LPJ_G0028964.1 mouse_genomes_project 4 144733241 144734440 - Plekhm2 protein_coding retained_intron MGP_LPJ_T0068879.1 MGP_LPJ_G0028964.1 mouse_genomes_project 4 144735350 144735951 - Plekhm2 protein_coding retained_intron MGP_LPJ_T0068880.1 MGP_LPJ_G0028964.1 mouse_genomes_project 4 144737385 144748570 - Plekhm2 protein_coding retained_intron MGP_LPJ_T0068881.1 MGP_LPJ_G0028964.1 mouse_genomes_project 4 144747691 144749137 - Plekhm2 protein_coding retained_intron MGP_LPJ_T0014482.1 MGP_LPJ_G0012573.1 mouse_genomes_project 4 43617133 43617423 - processed_pseudogene processed_pseudogene MGP_LPJ_T0068371.1 MGP_LPJ_G0028846.1 mouse_genomes_project 4 137395294 137413884 - MGP_LPJ_P0068371 Tmem50a protein_coding protein_coding MGP_LPJ_T0068372.1 MGP_LPJ_G0028846.1 mouse_genomes_project 4 137395836 137413875 - MGP_LPJ_P0068372 Tmem50a protein_coding protein_coding MGP_LPJ_T0068950.1 MGP_LPJ_G0028995.1 mouse_genomes_project 4 147841135 147861382 - MGP_LPJ_P0068950 1700012P22Rik protein_coding protein_coding MGP_LPJ_T0065849.1 MGP_LPJ_G0028283.1 mouse_genomes_project 4 62871027 62896029 + MGP_LPJ_P0065849 protein_coding unknown_likely_coding MGP_LPJ_T0065850.1 MGP_LPJ_G0028283.1 mouse_genomes_project 4 62871170 62874806 + protein_coding processed_transcript MGP_LPJ_T0065851.1 MGP_LPJ_G0028283.1 mouse_genomes_project 4 62872541 62882336 + MGP_LPJ_P0065851 protein_coding protein_coding MGP_LPJ_T0065852.1 MGP_LPJ_G0028283.1 mouse_genomes_project 4 62872541 62882367 + MGP_LPJ_P0065852 protein_coding protein_coding MGP_LPJ_T0001461.1 MGP_LPJ_G0001378.1 mouse_genomes_project 4 153922159 153924599 + TEC TEC MGP_LPJ_T0068578.1 MGP_LPJ_G0028896.1 mouse_genomes_project 4 140408407 140468813 + Rap1gap protein_coding processed_transcript MGP_LPJ_T0068579.1 MGP_LPJ_G0028896.1 mouse_genomes_project 4 140408435 140464020 + Rap1gap protein_coding retained_intron MGP_LPJ_T0068580.1 MGP_LPJ_G0028896.1 mouse_genomes_project 4 140424298 140482085 + MGP_LPJ_P0068580 Rap1gap protein_coding protein_coding MGP_LPJ_T0068581.1 MGP_LPJ_G0028896.1 mouse_genomes_project 4 140424298 140470180 + MGP_LPJ_P0068581 Rap1gap protein_coding protein_coding MGP_LPJ_T0068582.1 MGP_LPJ_G0028896.1 mouse_genomes_project 4 140424298 140468033 + MGP_LPJ_P0068582 Rap1gap protein_coding protein_coding MGP_LPJ_T0068583.1 MGP_LPJ_G0028896.1 mouse_genomes_project 4 140425212 140482084 + MGP_LPJ_P0068583 Rap1gap protein_coding protein_coding MGP_LPJ_T0068584.1 MGP_LPJ_G0028896.1 mouse_genomes_project 4 140430963 140468064 + Rap1gap protein_coding processed_transcript MGP_LPJ_T0068585.1 MGP_LPJ_G0028896.1 mouse_genomes_project 4 140459700 140482085 + MGP_LPJ_P0068585 Rap1gap protein_coding protein_coding MGP_LPJ_T0068586.1 MGP_LPJ_G0028896.1 mouse_genomes_project 4 140471095 140480582 + MGP_LPJ_P0068586 Rap1gap protein_coding protein_coding MGP_LPJ_T0068587.1 MGP_LPJ_G0028896.1 mouse_genomes_project 4 140476212 140482085 + Rap1gap protein_coding retained_intron MGP_LPJ_T0068588.1 MGP_LPJ_G0028896.1 mouse_genomes_project 4 140477552 140479281 + Rap1gap protein_coding retained_intron MGP_LPJ_T0068589.1 MGP_LPJ_G0028896.1 mouse_genomes_project 4 140479985 140481160 + Rap1gap protein_coding retained_intron MGP_LPJ_T0068590.1 MGP_LPJ_G0028896.1 mouse_genomes_project 4 140480404 140481043 + Rap1gap protein_coding retained_intron MGP_LPJ_T0068591.1 MGP_LPJ_G0028896.1 mouse_genomes_project 4 140480434 140481926 + Rap1gap protein_coding retained_intron MGP_LPJ_T0014470.1 MGP_LPJ_G0012561.1 mouse_genomes_project 4 37808034 37808989 - processed_pseudogene processed_pseudogene MGP_LPJ_T0067335.1 MGP_LPJ_G0028612.1 mouse_genomes_project 4 120783429 120816083 - MGP_LPJ_P0067335 Rimkla protein_coding protein_coding MGP_LPJ_T0067336.1 MGP_LPJ_G0028612.1 mouse_genomes_project 4 120792687 120815964 - Rimkla protein_coding processed_transcript MGP_LPJ_T0067903.1 MGP_LPJ_G0028749.1 mouse_genomes_project 4 131923394 131952158 - MGP_LPJ_P0067903 Tmem39b protein_coding nonsense_mediated_decay MGP_LPJ_T0067904.1 MGP_LPJ_G0028749.1 mouse_genomes_project 4 131923394 131952200 - MGP_LPJ_P0067904 Tmem39b protein_coding protein_coding MGP_LPJ_T0067905.1 MGP_LPJ_G0028749.1 mouse_genomes_project 4 131923638 131925986 - Tmem39b protein_coding retained_intron MGP_LPJ_T0067906.1 MGP_LPJ_G0028749.1 mouse_genomes_project 4 131942420 131951982 - MGP_LPJ_P0067906 Tmem39b protein_coding protein_coding MGP_LPJ_T0067907.1 MGP_LPJ_G0028749.1 mouse_genomes_project 4 131942496 131952106 - MGP_LPJ_P0067907 Tmem39b protein_coding nonsense_mediated_decay MGP_LPJ_T0066310.1 MGP_LPJ_G0028396.1 mouse_genomes_project 4 100328378 100399905 - MGP_LPJ_P0066310 Itgb3bp protein_coding protein_coding MGP_LPJ_T0066311.1 MGP_LPJ_G0028396.1 mouse_genomes_project 4 100328878 100482487 - Itgb3bp protein_coding processed_transcript MGP_LPJ_T0066312.1 MGP_LPJ_G0028396.1 mouse_genomes_project 4 100330307 100399811 - Itgb3bp protein_coding processed_transcript MGP_LPJ_T0066313.1 MGP_LPJ_G0028396.1 mouse_genomes_project 4 100334980 100399853 - Itgb3bp protein_coding processed_transcript MGP_LPJ_T0066314.1 MGP_LPJ_G0028396.1 mouse_genomes_project 4 100344923 100399809 - Itgb3bp protein_coding processed_transcript MGP_LPJ_T0014772.1 MGP_LPJ_G0012863.1 mouse_genomes_project 4 148849646 148849785 + processed_pseudogene processed_pseudogene MGP_LPJ_T0065737.1 MGP_LPJ_G0028253.1 mouse_genomes_project 4 58630305 58776536 + MGP_LPJ_P0065737 E130308A19Rik protein_coding protein_coding MGP_LPJ_T0065738.1 MGP_LPJ_G0028253.1 mouse_genomes_project 4 58630337 58731691 + MGP_LPJ_P0065738 E130308A19Rik protein_coding protein_coding MGP_LPJ_T0065739.1 MGP_LPJ_G0028253.1 mouse_genomes_project 4 58698123 58730533 + E130308A19Rik protein_coding processed_transcript MGP_LPJ_T0066958.1 MGP_LPJ_G0028533.1 mouse_genomes_project 4 117200581 117212785 - MGP_LPJ_P0066958 Lurap1 protein_coding protein_coding MGP_LPJ_T0066961.1 MGP_LPJ_G0028533.1 mouse_genomes_project 4 117205695 117225701 - Lurap1 protein_coding processed_transcript MGP_LPJ_T0100792.1 MGP_LPJ_G0039055.1 mouse_genomes_project 4 118298236 118298315 - Snord55 snoRNA snoRNA MGP_LPJ_T0065669.1 MGP_LPJ_G0028236.1 mouse_genomes_project 4 56869394 56882391 - MGP_LPJ_P0065669 Txn1 protein_coding protein_coding MGP_LPJ_T0064420.1 MGP_LPJ_G0027951.1 mouse_genomes_project 4 407404 408853 - MGP_LPJ_P0064420 Mos protein_coding protein_coding MGP_LPJ_T0100786.1 MGP_LPJ_G0039049.1 mouse_genomes_project 4 106905669 106905784 - Gm26047 snoRNA snoRNA MGP_LPJ_T0014602.1 MGP_LPJ_G0012693.1 mouse_genomes_project 4 90725202 90725961 + processed_pseudogene processed_pseudogene MGP_LPJ_T0068634.1 MGP_LPJ_G0028902.1 mouse_genomes_project 4 141053517 141106005 + MGP_LPJ_P0068634 Kif17 protein_coding protein_coding MGP_LPJ_T0068637.1 MGP_LPJ_G0028902.1 mouse_genomes_project 4 141065314 141105530 + MGP_LPJ_P0068637 Kif17 protein_coding protein_coding MGP_LPJ_T0068638.1 MGP_LPJ_G0028902.1 mouse_genomes_project 4 141065554 141105420 + MGP_LPJ_P0068638 Kif17 protein_coding protein_coding MGP_LPJ_T0068639.1 MGP_LPJ_G0028902.1 mouse_genomes_project 4 141065581 141090281 + Kif17 protein_coding retained_intron MGP_LPJ_T0066482.1 MGP_LPJ_G0028439.1 mouse_genomes_project 4 107517988 107569986 - MGP_LPJ_P0066482 Mroh7 protein_coding protein_coding MGP_LPJ_T0066483.1 MGP_LPJ_G0028439.1 mouse_genomes_project 4 107517995 107549659 - Mroh7 protein_coding processed_transcript MGP_LPJ_T0066484.1 MGP_LPJ_G0028439.1 mouse_genomes_project 4 107517995 107548176 - Mroh7 protein_coding retained_intron MGP_LPJ_T0066485.1 MGP_LPJ_G0028439.1 mouse_genomes_project 4 107518208 107549343 - Mroh7 protein_coding processed_transcript MGP_LPJ_T0066486.1 MGP_LPJ_G0028439.1 mouse_genomes_project 4 107530449 107539664 - Mroh7 protein_coding processed_transcript MGP_LPJ_T0066487.1 MGP_LPJ_G0028439.1 mouse_genomes_project 4 107548117 107570032 - MGP_LPJ_P0066487 Mroh7 protein_coding protein_coding MGP_LPJ_T0066488.1 MGP_LPJ_G0028439.1 mouse_genomes_project 4 107561474 107572968 - MGP_LPJ_P0066488 Mroh7 protein_coding protein_coding MGP_LPJ_T0065616.1 MGP_LPJ_G0028222.1 mouse_genomes_project 4 55601313 55602752 - MGP_LPJ_P0065616 Actl7b protein_coding protein_coding MGP_LPJ_T0069701.1 MGP_LPJ_G0029144.1 mouse_genomes_project 4 160295551 160298735 - MGP_LPJ_P0069701 B3galt6 protein_coding protein_coding MGP_LPJ_T0102162.1 MGP_LPJ_G0040199.1 mouse_genomes_project 4 124290241 124298128 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0065282.1 MGP_LPJ_G0028143.1 mouse_genomes_project 4 42199787 42201728 + MGP_LPJ_P0065282 Ccin protein_coding protein_coding MGP_LPJ_T0067921.1 MGP_LPJ_G0028753.1 mouse_genomes_project 4 132287052 132326776 + MGP_LPJ_P0067921 Adgrb2 protein_coding protein_coding MGP_LPJ_T0067922.1 MGP_LPJ_G0028753.1 mouse_genomes_project 4 132288205 132326776 + MGP_LPJ_P0067922 Adgrb2 protein_coding protein_coding MGP_LPJ_T0067923.1 MGP_LPJ_G0028753.1 mouse_genomes_project 4 132288309 132326776 + MGP_LPJ_P0067923 Adgrb2 protein_coding protein_coding MGP_LPJ_T0067924.1 MGP_LPJ_G0028753.1 mouse_genomes_project 4 132295089 132326776 + MGP_LPJ_P0067924 Adgrb2 protein_coding protein_coding MGP_LPJ_T0067925.1 MGP_LPJ_G0028753.1 mouse_genomes_project 4 132295090 132326482 + MGP_LPJ_P0067925 Adgrb2 protein_coding protein_coding MGP_LPJ_T0067926.1 MGP_LPJ_G0028753.1 mouse_genomes_project 4 132295090 132326482 + MGP_LPJ_P0067926 Adgrb2 protein_coding protein_coding MGP_LPJ_T0067927.1 MGP_LPJ_G0028753.1 mouse_genomes_project 4 132295090 132326482 + MGP_LPJ_P0067927 Adgrb2 protein_coding protein_coding MGP_LPJ_T0067928.1 MGP_LPJ_G0028753.1 mouse_genomes_project 4 132313974 132315969 + Adgrb2 protein_coding retained_intron MGP_LPJ_T0067929.1 MGP_LPJ_G0028753.1 mouse_genomes_project 4 132314167 132316649 + Adgrb2 protein_coding retained_intron MGP_LPJ_T0067930.1 MGP_LPJ_G0028753.1 mouse_genomes_project 4 132316303 132316680 + Adgrb2 protein_coding retained_intron MGP_LPJ_T0067931.1 MGP_LPJ_G0028753.1 mouse_genomes_project 4 132317742 132318688 + Adgrb2 protein_coding retained_intron MGP_LPJ_T0067932.1 MGP_LPJ_G0028753.1 mouse_genomes_project 4 132322920 132325707 + Adgrb2 protein_coding retained_intron MGP_LPJ_T0067933.1 MGP_LPJ_G0028753.1 mouse_genomes_project 4 132325258 132326574 + Adgrb2 protein_coding retained_intron MGP_LPJ_T0014635.1 MGP_LPJ_G0012726.1 mouse_genomes_project 4 101794103 101794275 - processed_pseudogene processed_pseudogene MGP_LPJ_T0066217.1 MGP_LPJ_G0028373.1 mouse_genomes_project 4 96506141 96553625 - MGP_LPJ_P0066217 Cyp2j12 protein_coding nonsense_mediated_decay MGP_LPJ_T0066218.1 MGP_LPJ_G0028373.1 mouse_genomes_project 4 96506396 96553611 - MGP_LPJ_P0066218 Cyp2j12 protein_coding protein_coding MGP_LPJ_T0069007.1 MGP_LPJ_G0029016.1 mouse_genomes_project 4 151634197 151635557 + MGP_LPJ_P0069007 Nppa protein_coding protein_coding MGP_LPJ_T0069013.1 MGP_LPJ_G0029018.1 mouse_genomes_project 4 151676240 151696051 + MGP_LPJ_P0069013 Mthfr protein_coding protein_coding MGP_LPJ_T0069014.1 MGP_LPJ_G0029018.1 mouse_genomes_project 4 151676322 151684458 + MGP_LPJ_P0069014 Mthfr protein_coding protein_coding MGP_LPJ_T0069015.1 MGP_LPJ_G0029018.1 mouse_genomes_project 4 151676337 151695433 + MGP_LPJ_P0069015 Mthfr protein_coding unknown_likely_coding MGP_LPJ_T0069016.1 MGP_LPJ_G0029018.1 mouse_genomes_project 4 151677969 151683351 + Mthfr protein_coding retained_intron MGP_LPJ_T0069017.1 MGP_LPJ_G0029018.1 mouse_genomes_project 4 151678353 151699396 + MGP_LPJ_P0069017 Mthfr protein_coding protein_coding MGP_LPJ_T0069018.1 MGP_LPJ_G0029018.1 mouse_genomes_project 4 151678449 151699396 + MGP_LPJ_P0069018 Mthfr protein_coding nonsense_mediated_decay MGP_LPJ_T0069019.1 MGP_LPJ_G0029018.1 mouse_genomes_project 4 151678764 151683859 + Mthfr protein_coding retained_intron MGP_LPJ_T0069020.1 MGP_LPJ_G0029018.1 mouse_genomes_project 4 151692565 151699393 + MGP_LPJ_P0069020 Mthfr protein_coding nonsense_mediated_decay MGP_LPJ_T0068664.1 MGP_LPJ_G0028913.1 mouse_genomes_project 4 141636018 141643930 + MGP_LPJ_P0068664 Pla2g2d protein_coding protein_coding MGP_LPJ_T0068665.1 MGP_LPJ_G0028913.1 mouse_genomes_project 4 141638177 141641409 + MGP_LPJ_P0068665 Pla2g2d protein_coding protein_coding MGP_LPJ_T0065044.1 MGP_LPJ_G0028100.1 mouse_genomes_project 4 39829964 39831702 - MGP_LPJ_P0065044 Ccl27a protein_coding protein_coding MGP_LPJ_T0065045.1 MGP_LPJ_G0028100.1 mouse_genomes_project 4 39829964 39830657 - MGP_LPJ_P0065045 Ccl27a protein_coding protein_coding MGP_LPJ_T0010635.1 MGP_LPJ_G0008753.1 mouse_genomes_project 4 120416970 120417036 + Mir1957a miRNA miRNA MGP_LPJ_T0064442.1 MGP_LPJ_G0027955.1 mouse_genomes_project 4 591860 620476 - MGP_LPJ_P0064442 Sdr16c6 protein_coding protein_coding MGP_LPJ_T0064443.1 MGP_LPJ_G0027955.1 mouse_genomes_project 4 591862 621067 - MGP_LPJ_P0064443 Sdr16c6 protein_coding protein_coding MGP_LPJ_T0068927.1 MGP_LPJ_G0028978.1 mouse_genomes_project 4 146603565 146627833 + MGP_LPJ_P0068927 Lrrc38 protein_coding protein_coding MGP_LPJ_T0068436.1 MGP_LPJ_G0028860.1 mouse_genomes_project 4 138440751 138451165 + MGP_LPJ_P0068436 Srsf10 protein_coding protein_coding MGP_LPJ_T0068437.1 MGP_LPJ_G0028860.1 mouse_genomes_project 4 138440751 138455753 + MGP_LPJ_P0068437 Srsf10 protein_coding protein_coding MGP_LPJ_T0068438.1 MGP_LPJ_G0028860.1 mouse_genomes_project 4 138440751 138451165 + MGP_LPJ_P0068438 Srsf10 protein_coding protein_coding MGP_LPJ_T0068439.1 MGP_LPJ_G0028860.1 mouse_genomes_project 4 138440751 138453735 + MGP_LPJ_P0068439 Srsf10 protein_coding protein_coding MGP_LPJ_T0068440.1 MGP_LPJ_G0028860.1 mouse_genomes_project 4 138440882 138453735 + Srsf10 protein_coding processed_transcript MGP_LPJ_T0068441.1 MGP_LPJ_G0028860.1 mouse_genomes_project 4 138441116 138443994 + Srsf10 protein_coding processed_transcript MGP_LPJ_T0068442.1 MGP_LPJ_G0028860.1 mouse_genomes_project 4 138441136 138444424 + Srsf10 protein_coding processed_transcript MGP_LPJ_T0068443.1 MGP_LPJ_G0028860.1 mouse_genomes_project 4 138446976 138448812 + Srsf10 protein_coding processed_transcript MGP_LPJ_T0068444.1 MGP_LPJ_G0028860.1 mouse_genomes_project 4 138447008 138448884 + Srsf10 protein_coding processed_transcript MGP_LPJ_T0100737.1 MGP_LPJ_G0039000.1 mouse_genomes_project 4 11123765 11123892 + Gm24908 snoRNA snoRNA MGP_LPJ_T0069006.1 MGP_LPJ_G0029015.1 mouse_genomes_project 4 151617114 151618532 + MGP_LPJ_P0069006 Nppb protein_coding protein_coding MGP_LPJ_T0014446.1 MGP_LPJ_G0012537.1 mouse_genomes_project 4 30459094 30459704 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014732.1 MGP_LPJ_G0012823.1 mouse_genomes_project 4 132022728 132023017 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065828.1 MGP_LPJ_G0028278.1 mouse_genomes_project 4 62636061 62639411 + MGP_LPJ_P0065828 Orm3 protein_coding protein_coding MGP_LPJ_T0066219.1 MGP_LPJ_G0028374.1 mouse_genomes_project 4 96608703 96650048 - MGP_LPJ_P0066219 Cyp2j7 protein_coding protein_coding MGP_LPJ_T0067380.1 MGP_LPJ_G0028622.1 mouse_genomes_project 4 121924661 121957639 - MGP_LPJ_P0067380 Ctps protein_coding protein_coding MGP_LPJ_T0067381.1 MGP_LPJ_G0028622.1 mouse_genomes_project 4 121926704 121929869 - Ctps protein_coding processed_transcript MGP_LPJ_T0067382.1 MGP_LPJ_G0028622.1 mouse_genomes_project 4 121926762 121932901 - Ctps protein_coding processed_transcript MGP_LPJ_T0065814.1 MGP_LPJ_G0028275.1 mouse_genomes_project 4 62433376 62439804 - Kif12 protein_coding processed_transcript MGP_LPJ_T0065815.1 MGP_LPJ_G0028275.1 mouse_genomes_project 4 62433379 62439889 - MGP_LPJ_P0065815 Kif12 protein_coding protein_coding MGP_LPJ_T0065816.1 MGP_LPJ_G0028275.1 mouse_genomes_project 4 62435219 62438540 - Kif12 protein_coding processed_transcript MGP_LPJ_T0065817.1 MGP_LPJ_G0028275.1 mouse_genomes_project 4 62435471 62438932 - Kif12 protein_coding processed_transcript MGP_LPJ_T0065818.1 MGP_LPJ_G0028275.1 mouse_genomes_project 4 62437149 62439488 - Kif12 protein_coding processed_transcript MGP_LPJ_T0007842.1 MGP_LPJ_G0006411.1 mouse_genomes_project 4 36472581 36781316 - lincRNA lincRNA MGP_LPJ_T0067203.1 MGP_LPJ_G0028577.1 mouse_genomes_project 4 119420635 119504662 - MGP_LPJ_P0067203 Ptprf protein_coding protein_coding MGP_LPJ_T0067204.1 MGP_LPJ_G0028577.1 mouse_genomes_project 4 119420642 119504505 - MGP_LPJ_P0067204 Ptprf protein_coding unknown_likely_coding MGP_LPJ_T0067205.1 MGP_LPJ_G0028577.1 mouse_genomes_project 4 119421410 119430102 - Ptprf protein_coding processed_transcript MGP_LPJ_T0067206.1 MGP_LPJ_G0028577.1 mouse_genomes_project 4 119421426 119448926 - MGP_LPJ_P0067206 Ptprf protein_coding protein_coding MGP_LPJ_T0067207.1 MGP_LPJ_G0028577.1 mouse_genomes_project 4 119421431 119448497 - MGP_LPJ_P0067207 Ptprf protein_coding protein_coding MGP_LPJ_T0067208.1 MGP_LPJ_G0028577.1 mouse_genomes_project 4 119422281 119423163 - Ptprf protein_coding processed_transcript MGP_LPJ_T0067209.1 MGP_LPJ_G0028577.1 mouse_genomes_project 4 119438632 119443575 - Ptprf protein_coding processed_transcript MGP_LPJ_T0001454.1 MGP_LPJ_G0001372.1 mouse_genomes_project 4 137998636 137998966 + TEC TEC MGP_LPJ_T0068790.1 MGP_LPJ_G0028946.1 mouse_genomes_project 4 144041093 144053698 - Crocc protein_coding retained_intron MGP_LPJ_T0068791.1 MGP_LPJ_G0028946.1 mouse_genomes_project 4 144041093 144046556 - Crocc protein_coding retained_intron MGP_LPJ_T0068792.1 MGP_LPJ_G0028946.1 mouse_genomes_project 4 144041440 144043263 - Crocc protein_coding retained_intron MGP_LPJ_T0068793.1 MGP_LPJ_G0028946.1 mouse_genomes_project 4 144041507 144080810 - MGP_LPJ_P0068793 Crocc protein_coding protein_coding MGP_LPJ_T0068794.1 MGP_LPJ_G0028946.1 mouse_genomes_project 4 144044187 144046948 - Crocc protein_coding retained_intron MGP_LPJ_T0068795.1 MGP_LPJ_G0028946.1 mouse_genomes_project 4 144045970 144046978 - Crocc protein_coding retained_intron MGP_LPJ_T0068796.1 MGP_LPJ_G0028946.1 mouse_genomes_project 4 144071861 144089913 - MGP_LPJ_P0068796 Crocc protein_coding protein_coding MGP_LPJ_T0068797.1 MGP_LPJ_G0028946.1 mouse_genomes_project 4 144073039 144087466 - Crocc protein_coding retained_intron MGP_LPJ_T0014652.1 MGP_LPJ_G0012743.1 mouse_genomes_project 4 108143694 108144130 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100809.1 MGP_LPJ_G0039072.1 mouse_genomes_project 4 134607575 134607705 + Snora61 snoRNA snoRNA MGP_LPJ_T0064769.1 MGP_LPJ_G0028034.1 mouse_genomes_project 4 30172457 30188690 + Casp8ap2 protein_coding processed_transcript MGP_LPJ_T0064770.1 MGP_LPJ_G0028034.1 mouse_genomes_project 4 30172476 30196381 + Casp8ap2 protein_coding processed_transcript MGP_LPJ_T0064771.1 MGP_LPJ_G0028034.1 mouse_genomes_project 4 30172479 30210150 + MGP_LPJ_P0064771 Casp8ap2 protein_coding protein_coding MGP_LPJ_T0064772.1 MGP_LPJ_G0028034.1 mouse_genomes_project 4 30172484 30210150 + MGP_LPJ_P0064772 Casp8ap2 protein_coding protein_coding MGP_LPJ_T0064773.1 MGP_LPJ_G0028034.1 mouse_genomes_project 4 30180977 30210150 + MGP_LPJ_P0064773 Casp8ap2 protein_coding protein_coding MGP_LPJ_T0099522.1 MGP_LPJ_G0037785.1 mouse_genomes_project 4 126541350 126541453 - Gm24480 snRNA snRNA MGP_LPJ_T0068097.1 MGP_LPJ_G0028786.1 mouse_genomes_project 4 134857073 134876704 + MGP_LPJ_P0068097 Dnajc8 protein_coding protein_coding MGP_LPJ_T0068098.1 MGP_LPJ_G0028786.1 mouse_genomes_project 4 134857073 134868163 + MGP_LPJ_P0068098 Dnajc8 protein_coding nonsense_mediated_decay MGP_LPJ_T0068099.1 MGP_LPJ_G0028786.1 mouse_genomes_project 4 134857090 134876623 + Dnajc8 protein_coding retained_intron MGP_LPJ_T0068100.1 MGP_LPJ_G0028786.1 mouse_genomes_project 4 134857099 134865728 + MGP_LPJ_P0068100 Dnajc8 protein_coding nonsense_mediated_decay MGP_LPJ_T0068101.1 MGP_LPJ_G0028786.1 mouse_genomes_project 4 134857100 134876159 + MGP_LPJ_P0068101 Dnajc8 protein_coding protein_coding MGP_LPJ_T0068102.1 MGP_LPJ_G0028786.1 mouse_genomes_project 4 134857104 134873589 + MGP_LPJ_P0068102 Dnajc8 protein_coding nonsense_mediated_decay MGP_LPJ_T0068103.1 MGP_LPJ_G0028786.1 mouse_genomes_project 4 134857104 134876182 + MGP_LPJ_P0068103 Dnajc8 protein_coding protein_coding MGP_LPJ_T0068104.1 MGP_LPJ_G0028786.1 mouse_genomes_project 4 134857163 134876101 + MGP_LPJ_P0068104 Dnajc8 protein_coding nonsense_mediated_decay MGP_LPJ_T0068105.1 MGP_LPJ_G0028786.1 mouse_genomes_project 4 134857182 134876420 + MGP_LPJ_P0068105 Dnajc8 protein_coding protein_coding MGP_LPJ_T0068106.1 MGP_LPJ_G0028786.1 mouse_genomes_project 4 134857551 134866145 + Dnajc8 protein_coding retained_intron MGP_LPJ_T0068107.1 MGP_LPJ_G0028786.1 mouse_genomes_project 4 134868175 134876156 + MGP_LPJ_P0068107 Dnajc8 protein_coding protein_coding MGP_LPJ_T0068108.1 MGP_LPJ_G0028786.1 mouse_genomes_project 4 134874286 134876405 + Dnajc8 protein_coding retained_intron MGP_LPJ_T0007901.1 MGP_LPJ_G0006461.1 mouse_genomes_project 4 89266233 89306634 + Gm12603 lincRNA lincRNA MGP_LPJ_T0007902.1 MGP_LPJ_G0006461.1 mouse_genomes_project 4 89274735 89306737 + Gm12603 lincRNA lincRNA MGP_LPJ_T0067489.1 MGP_LPJ_G0028654.1 mouse_genomes_project 4 125470550 125479007 - MGP_LPJ_P0067489 Ndufs5 protein_coding protein_coding MGP_LPJ_T0004605.1 MGP_LPJ_G0003997.1 mouse_genomes_project 4 145334672 145338206 + Gm13062 antisense antisense MGP_LPJ_T0067642.1 MGP_LPJ_G0028695.1 mouse_genomes_project 4 128530967 128569425 + MGP_LPJ_P0067642 Clspn protein_coding protein_coding MGP_LPJ_T0067643.1 MGP_LPJ_G0028695.1 mouse_genomes_project 4 128531027 128534985 + MGP_LPJ_P0067643 Clspn protein_coding protein_coding MGP_LPJ_T0067644.1 MGP_LPJ_G0028695.1 mouse_genomes_project 4 128531037 128540148 + Clspn protein_coding processed_transcript MGP_LPJ_T0067645.1 MGP_LPJ_G0028695.1 mouse_genomes_project 4 128534976 128542584 + MGP_LPJ_P0067645 Clspn protein_coding protein_coding MGP_LPJ_T0067646.1 MGP_LPJ_G0028695.1 mouse_genomes_project 4 128542865 128554059 + MGP_LPJ_P0067646 Clspn protein_coding protein_coding MGP_LPJ_T0067647.1 MGP_LPJ_G0028695.1 mouse_genomes_project 4 128548725 128551559 + Clspn protein_coding processed_transcript MGP_LPJ_T0067648.1 MGP_LPJ_G0028695.1 mouse_genomes_project 4 128557629 128566791 + Clspn protein_coding processed_transcript MGP_LPJ_T0004463.1 MGP_LPJ_G0003889.1 mouse_genomes_project 4 39666341 39668380 + Gm12406 antisense antisense MGP_LPJ_T0067364.1 MGP_LPJ_G0028619.1 mouse_genomes_project 4 121640469 121662405 - MGP_LPJ_P0067364 Foxo6 protein_coding protein_coding MGP_LPJ_T0099511.1 MGP_LPJ_G0037774.1 mouse_genomes_project 4 115803196 115803329 - Gm23230 snRNA snRNA MGP_LPJ_T0068745.1 MGP_LPJ_G0028935.1 mouse_genomes_project 4 142975765 143208581 - MGP_LPJ_P0068745 Igsf21 protein_coding protein_coding MGP_LPJ_T0064945.1 MGP_LPJ_G0028076.1 mouse_genomes_project 4 39079066 39084528 - MGP_LPJ_P0064945 Aqp3 protein_coding protein_coding MGP_LPJ_T0064946.1 MGP_LPJ_G0028076.1 mouse_genomes_project 4 39080126 39080793 - Aqp3 protein_coding retained_intron MGP_LPJ_T0066321.1 MGP_LPJ_G0028398.1 mouse_genomes_project 4 100482087 100544232 + MGP_LPJ_P0066321 Pgm2 protein_coding protein_coding MGP_LPJ_T0066322.1 MGP_LPJ_G0028398.1 mouse_genomes_project 4 100509963 100544232 + MGP_LPJ_P0066322 Pgm2 protein_coding protein_coding MGP_LPJ_T0067141.1 MGP_LPJ_G0028566.1 mouse_genomes_project 4 118897846 118900307 + MGP_LPJ_P0067141 Gm12845 protein_coding protein_coding MGP_LPJ_T0068110.1 MGP_LPJ_G0028788.1 mouse_genomes_project 4 134970353 135025878 + MGP_LPJ_P0068110 Eya3 protein_coding protein_coding MGP_LPJ_T0068111.1 MGP_LPJ_G0028788.1 mouse_genomes_project 4 134970412 135056782 + MGP_LPJ_P0068111 Eya3 protein_coding protein_coding MGP_LPJ_T0068112.1 MGP_LPJ_G0028788.1 mouse_genomes_project 4 134970422 135056779 + MGP_LPJ_P0068112 Eya3 protein_coding protein_coding MGP_LPJ_T0068113.1 MGP_LPJ_G0028788.1 mouse_genomes_project 4 134970424 135030087 + Eya3 protein_coding processed_transcript MGP_LPJ_T0068114.1 MGP_LPJ_G0028788.1 mouse_genomes_project 4 134970430 135024090 + Eya3 protein_coding processed_transcript MGP_LPJ_T0068115.1 MGP_LPJ_G0028788.1 mouse_genomes_project 4 134970445 135053072 + Eya3 protein_coding processed_transcript MGP_LPJ_T0068116.1 MGP_LPJ_G0028788.1 mouse_genomes_project 4 134970450 135054271 + MGP_LPJ_P0068116 Eya3 protein_coding protein_coding MGP_LPJ_T0068117.1 MGP_LPJ_G0028788.1 mouse_genomes_project 4 134970451 135054413 + Eya3 protein_coding processed_transcript MGP_LPJ_T0068118.1 MGP_LPJ_G0028788.1 mouse_genomes_project 4 134970483 135026063 + Eya3 protein_coding processed_transcript MGP_LPJ_T0068119.1 MGP_LPJ_G0028788.1 mouse_genomes_project 4 134988874 135054379 + Eya3 protein_coding processed_transcript MGP_LPJ_T0068120.1 MGP_LPJ_G0028788.1 mouse_genomes_project 4 135032019 135043545 + Eya3 protein_coding processed_transcript MGP_LPJ_T0068121.1 MGP_LPJ_G0028788.1 mouse_genomes_project 4 135035400 135052583 + Eya3 protein_coding processed_transcript MGP_LPJ_T0017984.1 MGP_LPJ_G0015453.1 mouse_genomes_project 4 22217914 22486133 + processed_transcript processed_transcript MGP_LPJ_T0065807.1 MGP_LPJ_G0028273.1 mouse_genomes_project 4 62231601 62400820 + MGP_LPJ_P0065807 Zfp618 protein_coding protein_coding MGP_LPJ_T0065808.1 MGP_LPJ_G0028273.1 mouse_genomes_project 4 62231601 62406493 + MGP_LPJ_P0065808 Zfp618 protein_coding protein_coding MGP_LPJ_T0065809.1 MGP_LPJ_G0028273.1 mouse_genomes_project 4 62231601 62382564 + MGP_LPJ_P0065809 Zfp618 protein_coding protein_coding MGP_LPJ_T0065810.1 MGP_LPJ_G0028273.1 mouse_genomes_project 4 62305187 62400638 + MGP_LPJ_P0065810 Zfp618 protein_coding unknown_likely_coding MGP_LPJ_T0065811.1 MGP_LPJ_G0028273.1 mouse_genomes_project 4 62387215 62388244 + Zfp618 protein_coding processed_transcript MGP_LPJ_T0064951.1 MGP_LPJ_G0028078.1 mouse_genomes_project 4 39131372 39190349 + MGP_LPJ_P0064951 Ube2r2 protein_coding protein_coding MGP_LPJ_T0064952.1 MGP_LPJ_G0028078.1 mouse_genomes_project 4 39179945 39187840 + Ube2r2 protein_coding retained_intron MGP_LPJ_T0064953.1 MGP_LPJ_G0028078.1 mouse_genomes_project 4 39185908 39188053 + Ube2r2 protein_coding retained_intron MGP_LPJ_T0007878.1 MGP_LPJ_G0006440.1 mouse_genomes_project 4 58258207 58261285 + Gm12596 lincRNA lincRNA MGP_LPJ_T0067947.1 MGP_LPJ_G0028755.1 mouse_genomes_project 4 132412395 132442105 + MGP_LPJ_P0067947 Pef1 protein_coding protein_coding MGP_LPJ_T0067948.1 MGP_LPJ_G0028755.1 mouse_genomes_project 4 132420079 132442104 + MGP_LPJ_P0067948 Pef1 protein_coding protein_coding MGP_LPJ_T0069556.1 MGP_LPJ_G0029116.1 mouse_genomes_project 4 159658221 159666872 + protein_coding retained_intron MGP_LPJ_T0069557.1 MGP_LPJ_G0029116.1 mouse_genomes_project 4 159658289 159698874 + protein_coding processed_transcript MGP_LPJ_T0069558.1 MGP_LPJ_G0029116.1 mouse_genomes_project 4 159658289 159676236 + MGP_LPJ_P0069558 protein_coding protein_coding MGP_LPJ_T0069559.1 MGP_LPJ_G0029116.1 mouse_genomes_project 4 159658289 159722796 + MGP_LPJ_P0069559 protein_coding protein_coding MGP_LPJ_T0069560.1 MGP_LPJ_G0029116.1 mouse_genomes_project 4 159658340 159722382 + MGP_LPJ_P0069560 protein_coding protein_coding MGP_LPJ_T0069561.1 MGP_LPJ_G0029116.1 mouse_genomes_project 4 159676174 159703216 + protein_coding retained_intron MGP_LPJ_T0069562.1 MGP_LPJ_G0029116.1 mouse_genomes_project 4 159684112 159703049 + protein_coding processed_transcript MGP_LPJ_T0069563.1 MGP_LPJ_G0029116.1 mouse_genomes_project 4 159706479 159722382 + protein_coding retained_intron MGP_LPJ_T0069564.1 MGP_LPJ_G0029116.1 mouse_genomes_project 4 159717866 159722507 + protein_coding retained_intron MGP_LPJ_T0069565.1 MGP_LPJ_G0029116.1 mouse_genomes_project 4 159717913 159722457 + protein_coding retained_intron MGP_LPJ_T0014730.1 MGP_LPJ_G0012821.1 mouse_genomes_project 4 131019666 131020670 - processed_pseudogene processed_pseudogene MGP_LPJ_T0068157.1 MGP_LPJ_G0028798.1 mouse_genomes_project 4 135489029 135561107 + MGP_LPJ_P0068157 Wasf2 protein_coding protein_coding MGP_LPJ_T0068158.1 MGP_LPJ_G0028798.1 mouse_genomes_project 4 135489064 135545538 + MGP_LPJ_P0068158 Wasf2 protein_coding protein_coding MGP_LPJ_T0068159.1 MGP_LPJ_G0028798.1 mouse_genomes_project 4 135489153 135537008 + Wasf2 protein_coding processed_transcript MGP_LPJ_T0068160.1 MGP_LPJ_G0028798.1 mouse_genomes_project 4 135536448 135537060 + Wasf2 protein_coding processed_transcript MGP_LPJ_T0068161.1 MGP_LPJ_G0028798.1 mouse_genomes_project 4 135536818 135556816 + MGP_LPJ_P0068161 Wasf2 protein_coding protein_coding MGP_LPJ_T0068162.1 MGP_LPJ_G0028798.1 mouse_genomes_project 4 135549394 135550940 + Wasf2 protein_coding processed_transcript MGP_LPJ_T0010608.1 MGP_LPJ_G0008726.1 mouse_genomes_project 4 38823022 38823105 - Gm24112 miRNA miRNA MGP_LPJ_T0004498.1 MGP_LPJ_G0003920.1 mouse_genomes_project 4 95426664 95444839 + Junos antisense antisense MGP_LPJ_T0004499.1 MGP_LPJ_G0003920.1 mouse_genomes_project 4 95428089 95438105 + Junos antisense antisense MGP_LPJ_T0004500.1 MGP_LPJ_G0003920.1 mouse_genomes_project 4 95428378 95544398 + Junos antisense antisense MGP_LPJ_T0004501.1 MGP_LPJ_G0003920.1 mouse_genomes_project 4 95453011 95541587 + Junos antisense antisense MGP_LPJ_T0004502.1 MGP_LPJ_G0003920.1 mouse_genomes_project 4 95453158 95521663 + Junos antisense antisense MGP_LPJ_T0004503.1 MGP_LPJ_G0003920.1 mouse_genomes_project 4 95470862 95555674 + Junos antisense antisense MGP_LPJ_T0004504.1 MGP_LPJ_G0003920.1 mouse_genomes_project 4 95478025 95560342 + Junos antisense antisense MGP_LPJ_T0004505.1 MGP_LPJ_G0003920.1 mouse_genomes_project 4 95503414 95561719 + Junos antisense antisense MGP_LPJ_T0014630.1 MGP_LPJ_G0012721.1 mouse_genomes_project 4 100072588 100073003 - processed_pseudogene processed_pseudogene MGP_LPJ_T0064528.1 MGP_LPJ_G0027972.1 mouse_genomes_project 4 7775765 7799497 - MGP_LPJ_P0064528 Ndufaf6 protein_coding protein_coding MGP_LPJ_T0064529.1 MGP_LPJ_G0027972.1 mouse_genomes_project 4 7775770 7781779 - Ndufaf6 protein_coding processed_transcript MGP_LPJ_T0064530.1 MGP_LPJ_G0027972.1 mouse_genomes_project 4 7775933 7799442 - Ndufaf6 protein_coding processed_transcript MGP_LPJ_T0064531.1 MGP_LPJ_G0027972.1 mouse_genomes_project 4 7781768 7799442 - Ndufaf6 protein_coding processed_transcript MGP_LPJ_T0064532.1 MGP_LPJ_G0027972.1 mouse_genomes_project 4 7784747 7799476 - Ndufaf6 protein_coding processed_transcript MGP_LPJ_T0064533.1 MGP_LPJ_G0027972.1 mouse_genomes_project 4 7793546 7799498 - Ndufaf6 protein_coding processed_transcript MGP_LPJ_T0064534.1 MGP_LPJ_G0027972.1 mouse_genomes_project 4 7796284 7799481 - Ndufaf6 protein_coding processed_transcript MGP_LPJ_T0064582.1 MGP_LPJ_G0027983.1 mouse_genomes_project 4 8743050 8751319 - MGP_LPJ_P0064582 Pdp1 protein_coding protein_coding MGP_LPJ_T0064583.1 MGP_LPJ_G0027983.1 mouse_genomes_project 4 8744673 8750848 - MGP_LPJ_P0064583 Pdp1 protein_coding protein_coding MGP_LPJ_T0064584.1 MGP_LPJ_G0027983.1 mouse_genomes_project 4 8744673 8750688 - MGP_LPJ_P0064584 Pdp1 protein_coding protein_coding MGP_LPJ_T0064585.1 MGP_LPJ_G0027983.1 mouse_genomes_project 4 8744673 8750794 - MGP_LPJ_P0064585 Pdp1 protein_coding protein_coding MGP_LPJ_T0064586.1 MGP_LPJ_G0027983.1 mouse_genomes_project 4 8744673 8751294 - MGP_LPJ_P0064586 Pdp1 protein_coding protein_coding MGP_LPJ_T0064587.1 MGP_LPJ_G0027983.1 mouse_genomes_project 4 8744677 8751287 - MGP_LPJ_P0064587 Pdp1 protein_coding protein_coding MGP_LPJ_T0064861.1 MGP_LPJ_G0028055.1 mouse_genomes_project 4 32485375 32588904 - MGP_LPJ_P0064861 Zfp292 protein_coding protein_coding MGP_LPJ_T0064862.1 MGP_LPJ_G0028055.1 mouse_genomes_project 4 32485375 32588874 - MGP_LPJ_P0064862 Zfp292 protein_coding protein_coding MGP_LPJ_T0068499.1 MGP_LPJ_G0028874.1 mouse_genomes_project 4 138912962 138918804 + MGP_LPJ_P0068499 Zfp46 protein_coding protein_coding MGP_LPJ_T0068500.1 MGP_LPJ_G0028874.1 mouse_genomes_project 4 138913054 138918561 + MGP_LPJ_P0068500 Zfp46 protein_coding protein_coding MGP_LPJ_T0068501.1 MGP_LPJ_G0028874.1 mouse_genomes_project 4 138913348 138914760 + Zfp46 protein_coding processed_transcript MGP_LPJ_T0068502.1 MGP_LPJ_G0028874.1 mouse_genomes_project 4 138914351 138922495 + MGP_LPJ_P0068502 Zfp46 protein_coding protein_coding MGP_LPJ_T0068503.1 MGP_LPJ_G0028874.1 mouse_genomes_project 4 138914388 138918725 + MGP_LPJ_P0068503 Zfp46 protein_coding protein_coding MGP_LPJ_T0064589.1 MGP_LPJ_G0027985.1 mouse_genomes_project 4 8827836 8883626 - MGP_LPJ_P0064589 Tmem67 protein_coding protein_coding MGP_LPJ_T0064590.1 MGP_LPJ_G0027985.1 mouse_genomes_project 4 8827844 8883607 - MGP_LPJ_P0064590 Tmem67 protein_coding nonsense_mediated_decay MGP_LPJ_T0064591.1 MGP_LPJ_G0027985.1 mouse_genomes_project 4 8828126 8885163 - MGP_LPJ_P0064591 Tmem67 protein_coding protein_coding MGP_LPJ_T0064592.1 MGP_LPJ_G0027985.1 mouse_genomes_project 4 8850627 8883676 - Tmem67 protein_coding retained_intron MGP_LPJ_T0064593.1 MGP_LPJ_G0027985.1 mouse_genomes_project 4 8856795 8883596 - Tmem67 protein_coding retained_intron MGP_LPJ_T0064594.1 MGP_LPJ_G0027985.1 mouse_genomes_project 4 8874256 8883601 - Tmem67 protein_coding retained_intron MGP_LPJ_T0007843.1 MGP_LPJ_G0006412.1 mouse_genomes_project 4 38248322 38252810 + 4930509K18Rik lincRNA lincRNA MGP_LPJ_T0064797.1 MGP_LPJ_G0028039.1 mouse_genomes_project 4 30615538 30629911 + MGP_LPJ_P0064797 Ube2j1 protein_coding protein_coding MGP_LPJ_T0064798.1 MGP_LPJ_G0028039.1 mouse_genomes_project 4 30615596 30637060 + MGP_LPJ_P0064798 Ube2j1 protein_coding protein_coding MGP_LPJ_T0064639.1 MGP_LPJ_G0028000.1 mouse_genomes_project 4 13049569 13090700 - MGP_LPJ_P0064639 Ripk2 protein_coding protein_coding MGP_LPJ_T0064640.1 MGP_LPJ_G0028000.1 mouse_genomes_project 4 13049577 13090696 - MGP_LPJ_P0064640 Ripk2 protein_coding nonsense_mediated_decay MGP_LPJ_T0014707.1 MGP_LPJ_G0012798.1 mouse_genomes_project 4 122806849 122807174 + processed_pseudogene processed_pseudogene MGP_LPJ_T0067454.1 MGP_LPJ_G0028647.1 mouse_genomes_project 4 124828320 124841091 - MGP_LPJ_P0067454 Ppie protein_coding protein_coding MGP_LPJ_T0067455.1 MGP_LPJ_G0028647.1 mouse_genomes_project 4 124828525 124838079 - Ppie protein_coding processed_transcript MGP_LPJ_T0067456.1 MGP_LPJ_G0028647.1 mouse_genomes_project 4 124828906 124840166 - Ppie protein_coding processed_transcript MGP_LPJ_T0067457.1 MGP_LPJ_G0028647.1 mouse_genomes_project 4 124837582 124841070 - Ppie protein_coding processed_transcript MGP_LPJ_T0010640.1 MGP_LPJ_G0008758.1 mouse_genomes_project 4 125356619 125356721 + Mir6398 miRNA miRNA MGP_LPJ_T0066066.1 MGP_LPJ_G0028328.1 mouse_genomes_project 4 86865688 86951738 + MGP_LPJ_P0066066 Dennd4c protein_coding protein_coding MGP_LPJ_T0066067.1 MGP_LPJ_G0028328.1 mouse_genomes_project 4 86865688 86974438 + MGP_LPJ_P0066067 Dennd4c protein_coding protein_coding MGP_LPJ_T0066068.1 MGP_LPJ_G0028328.1 mouse_genomes_project 4 86890344 86972871 + MGP_LPJ_P0066068 Dennd4c protein_coding protein_coding MGP_LPJ_T0066069.1 MGP_LPJ_G0028328.1 mouse_genomes_project 4 86893983 86899338 + Dennd4c protein_coding processed_transcript MGP_LPJ_T0067554.1 MGP_LPJ_G0028674.1 mouse_genomes_project 4 126920906 126933395 - MGP_LPJ_P0067554 Dnali1 protein_coding protein_coding MGP_LPJ_T0064868.1 MGP_LPJ_G0028058.1 mouse_genomes_project 4 32878779 32880729 + MGP_LPJ_P0064868 Ifnk protein_coding protein_coding MGP_LPJ_T0099481.1 MGP_LPJ_G0037744.1 mouse_genomes_project 4 42302128 42302240 - Gm22706 snRNA snRNA MGP_LPJ_T0064648.1 MGP_LPJ_G0028004.1 mouse_genomes_project 4 16576532 16631092 - MGP_LPJ_P0064648 Cpne3 protein_coding protein_coding MGP_LPJ_T0064649.1 MGP_LPJ_G0028004.1 mouse_genomes_project 4 16600814 16603871 - Cpne3 protein_coding processed_transcript MGP_LPJ_T0064650.1 MGP_LPJ_G0028004.1 mouse_genomes_project 4 16609196 16631067 - Cpne3 protein_coding retained_intron MGP_LPJ_T0066245.1 MGP_LPJ_G0028384.1 mouse_genomes_project 4 98831774 98861049 - MGP_LPJ_P0066245 Tm2d1 protein_coding protein_coding MGP_LPJ_T0066246.1 MGP_LPJ_G0028384.1 mouse_genomes_project 4 98831774 98860863 - MGP_LPJ_P0066246 Tm2d1 protein_coding protein_coding MGP_LPJ_T0066247.1 MGP_LPJ_G0028384.1 mouse_genomes_project 4 98831774 98852823 - MGP_LPJ_P0066247 Tm2d1 protein_coding nonsense_mediated_decay MGP_LPJ_T0066248.1 MGP_LPJ_G0028384.1 mouse_genomes_project 4 98831774 98861109 - MGP_LPJ_P0066248 Tm2d1 protein_coding protein_coding MGP_LPJ_T0066249.1 MGP_LPJ_G0028384.1 mouse_genomes_project 4 98832009 98861035 - MGP_LPJ_P0066249 Tm2d1 protein_coding protein_coding MGP_LPJ_T0007837.1 MGP_LPJ_G0006406.1 mouse_genomes_project 4 27917049 28013230 + Gm11924 lincRNA lincRNA MGP_LPJ_T0066172.1 MGP_LPJ_G0028367.1 mouse_genomes_project 4 95275280 95290837 - MGP_LPJ_P0066172 Eqtn protein_coding protein_coding MGP_LPJ_T0066173.1 MGP_LPJ_G0028367.1 mouse_genomes_project 4 95275444 95290788 - MGP_LPJ_P0066173 Eqtn protein_coding protein_coding MGP_LPJ_T0011576.1 MGP_LPJ_G0009694.1 mouse_genomes_project 4 42113778 42113855 + Gm27265 misc_RNA misc_RNA MGP_LPJ_T0065792.1 MGP_LPJ_G0028271.1 mouse_genomes_project 4 61787935 61810627 + MGP_LPJ_P0065792 4933430I17Rik protein_coding protein_coding MGP_LPJ_T0065793.1 MGP_LPJ_G0028271.1 mouse_genomes_project 4 61788377 61810396 + MGP_LPJ_P0065793 4933430I17Rik protein_coding unknown_likely_coding MGP_LPJ_T0004585.1 MGP_LPJ_G0003982.1 mouse_genomes_project 4 140937819 140938743 - 1700095J12Rik antisense antisense MGP_LPJ_T0014391.1 MGP_LPJ_G0012482.1 mouse_genomes_project 4 14237848 14238109 - processed_pseudogene processed_pseudogene MGP_LPJ_T0069360.1 MGP_LPJ_G0029083.1 mouse_genomes_project 4 156365966 156372701 + Rpl22 protein_coding processed_transcript MGP_LPJ_T0069361.1 MGP_LPJ_G0029083.1 mouse_genomes_project 4 156366077 156372705 + MGP_LPJ_P0069361 Rpl22 protein_coding protein_coding MGP_LPJ_T0069362.1 MGP_LPJ_G0029083.1 mouse_genomes_project 4 156366091 156374296 + MGP_LPJ_P0069362 Rpl22 protein_coding protein_coding MGP_LPJ_T0069363.1 MGP_LPJ_G0029083.1 mouse_genomes_project 4 156366093 156374295 + MGP_LPJ_P0069363 Rpl22 protein_coding protein_coding MGP_LPJ_T0069364.1 MGP_LPJ_G0029083.1 mouse_genomes_project 4 156367291 156370271 + Rpl22 protein_coding processed_transcript MGP_LPJ_T0069365.1 MGP_LPJ_G0029083.1 mouse_genomes_project 4 156367350 156370500 + Rpl22 protein_coding processed_transcript MGP_LPJ_T0069366.1 MGP_LPJ_G0029083.1 mouse_genomes_project 4 156367704 156372698 + Rpl22 protein_coding processed_transcript MGP_LPJ_T0069367.1 MGP_LPJ_G0029083.1 mouse_genomes_project 4 156367781 156372699 + Rpl22 protein_coding processed_transcript MGP_LPJ_T0014400.1 MGP_LPJ_G0012491.1 mouse_genomes_project 4 17465948 17467252 + processed_pseudogene processed_pseudogene MGP_LPJ_T0066998.1 MGP_LPJ_G0028540.1 mouse_genomes_project 4 117664391 117703919 + MGP_LPJ_P0066998 Gpbp1l1 protein_coding protein_coding MGP_LPJ_T0066999.1 MGP_LPJ_G0028540.1 mouse_genomes_project 4 117664812 117703004 + MGP_LPJ_P0066999 Gpbp1l1 protein_coding protein_coding MGP_LPJ_T0067000.1 MGP_LPJ_G0028540.1 mouse_genomes_project 4 117688781 117691410 + Gpbp1l1 protein_coding processed_transcript MGP_LPJ_T0067001.1 MGP_LPJ_G0028540.1 mouse_genomes_project 4 117691320 117698762 + Gpbp1l1 protein_coding processed_transcript MGP_LPJ_T0068952.1 MGP_LPJ_G0028997.1 mouse_genomes_project 4 147882917 147897562 - MGP_LPJ_P0068952 Aadacl3 protein_coding protein_coding MGP_LPJ_T0068903.1 MGP_LPJ_G0028973.1 mouse_genomes_project 4 145005119 145139268 - MGP_LPJ_P0068903 Fhad1 protein_coding protein_coding MGP_LPJ_T0068904.1 MGP_LPJ_G0028973.1 mouse_genomes_project 4 145005532 145135869 - MGP_LPJ_P0068904 Fhad1 protein_coding protein_coding MGP_LPJ_T0068905.1 MGP_LPJ_G0028973.1 mouse_genomes_project 4 145005532 145135869 - MGP_LPJ_P0068905 Fhad1 protein_coding unknown_likely_coding MGP_LPJ_T0068906.1 MGP_LPJ_G0028973.1 mouse_genomes_project 4 145034972 145041062 - Fhad1 protein_coding processed_transcript MGP_LPJ_T0068907.1 MGP_LPJ_G0028973.1 mouse_genomes_project 4 145034972 145051779 - MGP_LPJ_P0068907 Fhad1 protein_coding protein_coding MGP_LPJ_T0068908.1 MGP_LPJ_G0028973.1 mouse_genomes_project 4 145047052 145072187 - Fhad1 protein_coding processed_transcript MGP_LPJ_T0068909.1 MGP_LPJ_G0028973.1 mouse_genomes_project 4 145051472 145074309 - Fhad1 protein_coding processed_transcript MGP_LPJ_T0068910.1 MGP_LPJ_G0028973.1 mouse_genomes_project 4 145084350 145139283 - Fhad1 protein_coding retained_intron MGP_LPJ_T0068911.1 MGP_LPJ_G0028973.1 mouse_genomes_project 4 145137978 145139240 - Fhad1 protein_coding processed_transcript MGP_LPJ_T0004441.1 MGP_LPJ_G0003872.1 mouse_genomes_project 4 3271130 3287103 + Gm11802 antisense antisense MGP_LPJ_T0011592.1 MGP_LPJ_G0009710.1 mouse_genomes_project 4 110174748 110175022 - Gm23743 misc_RNA misc_RNA MGP_LPJ_T0004534.1 MGP_LPJ_G0003941.1 mouse_genomes_project 4 117658480 117659361 + Gm12953 antisense antisense MGP_LPJ_T0067384.1 MGP_LPJ_G0028624.1 mouse_genomes_project 4 122072262 122073511 + MGP_LPJ_P0067384 Cited4 protein_coding protein_coding MGP_LPJ_T0004486.1 MGP_LPJ_G0003909.1 mouse_genomes_project 4 61886066 61891890 - Gm11209 antisense antisense MGP_LPJ_T0065463.1 MGP_LPJ_G0028177.1 mouse_genomes_project 4 44979566 45028032 - MGP_LPJ_P0065463 Tbc1d2 protein_coding protein_coding MGP_LPJ_T0065464.1 MGP_LPJ_G0028177.1 mouse_genomes_project 4 45009576 45028032 - MGP_LPJ_P0065464 Tbc1d2 protein_coding protein_coding MGP_LPJ_T0068679.1 MGP_LPJ_G0028917.1 mouse_genomes_project 4 141771155 141789603 - MGP_LPJ_P0068679 Otud3 protein_coding protein_coding MGP_LPJ_T0068557.1 MGP_LPJ_G0028893.1 mouse_genomes_project 4 140200235 140309029 + MGP_LPJ_P0068557 Hspg2 protein_coding protein_coding MGP_LPJ_T0068558.1 MGP_LPJ_G0028893.1 mouse_genomes_project 4 140200269 140309028 + MGP_LPJ_P0068558 Hspg2 protein_coding protein_coding MGP_LPJ_T0068559.1 MGP_LPJ_G0028893.1 mouse_genomes_project 4 140307561 140308508 + Hspg2 protein_coding processed_transcript MGP_LPJ_T0064712.1 MGP_LPJ_G0028021.1 mouse_genomes_project 4 19638968 19644571 - MGP_LPJ_P0064712 Pou3f2 protein_coding protein_coding MGP_LPJ_T0065831.1 MGP_LPJ_G0028280.1 mouse_genomes_project 4 62656962 62695531 - MGP_LPJ_P0065831 Akna protein_coding protein_coding MGP_LPJ_T0065832.1 MGP_LPJ_G0028280.1 mouse_genomes_project 4 62669592 62670872 - Akna protein_coding processed_transcript MGP_LPJ_T0098258.1 MGP_LPJ_G0036539.1 mouse_genomes_project 4 57900220 57900305 + Gm26400 rRNA rRNA MGP_LPJ_T0004518.1 MGP_LPJ_G0003931.1 mouse_genomes_project 4 107996372 108006632 + Gm12802 antisense antisense MGP_LPJ_T0014410.1 MGP_LPJ_G0012501.1 mouse_genomes_project 4 20620540 20621741 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014697.1 MGP_LPJ_G0012788.1 mouse_genomes_project 4 120844519 120845476 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014487.1 MGP_LPJ_G0012578.1 mouse_genomes_project 4 45450302 45450665 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007890.1 MGP_LPJ_G0006452.1 mouse_genomes_project 4 81854943 81856841 - Gm12914 lincRNA lincRNA MGP_LPJ_T0066530.1 MGP_LPJ_G0028445.1 mouse_genomes_project 4 107963915 107974793 + MGP_LPJ_P0066530 Cdcp2 protein_coding protein_coding MGP_LPJ_T0064963.1 MGP_LPJ_G0028081.1 mouse_genomes_project 4 39358978 39408526 + MGP_LPJ_P0064963 Ubap1 protein_coding protein_coding MGP_LPJ_T0064964.1 MGP_LPJ_G0028081.1 mouse_genomes_project 4 39358978 39407767 + MGP_LPJ_P0064964 Ubap1 protein_coding protein_coding MGP_LPJ_T0064965.1 MGP_LPJ_G0028081.1 mouse_genomes_project 4 39359030 39388888 + Ubap1 protein_coding processed_transcript MGP_LPJ_T0064966.1 MGP_LPJ_G0028081.1 mouse_genomes_project 4 39388850 39397443 + Ubap1 protein_coding processed_transcript MGP_LPJ_T0064967.1 MGP_LPJ_G0028081.1 mouse_genomes_project 4 39389327 39406693 + MGP_LPJ_P0064967 Ubap1 protein_coding protein_coding MGP_LPJ_T0010647.1 MGP_LPJ_G0008765.1 mouse_genomes_project 4 134270145 134270217 - Gm27445 miRNA miRNA MGP_LPJ_T0017987.1 MGP_LPJ_G0015456.1 mouse_genomes_project 4 32609885 32615243 - Platr9 processed_transcript processed_transcript MGP_LPJ_T0017988.1 MGP_LPJ_G0015456.1 mouse_genomes_project 4 32613550 32615243 - Platr9 processed_transcript processed_transcript MGP_LPJ_T0064819.1 MGP_LPJ_G0028047.1 mouse_genomes_project 4 31680504 31704085 - MGP_LPJ_P0064819 Spaca1 protein_coding protein_coding MGP_LPJ_T0064820.1 MGP_LPJ_G0028047.1 mouse_genomes_project 4 31680506 31693608 - MGP_LPJ_P0064820 Spaca1 protein_coding protein_coding MGP_LPJ_T0064821.1 MGP_LPJ_G0028047.1 mouse_genomes_project 4 31683944 31704237 - MGP_LPJ_P0064821 Spaca1 protein_coding protein_coding MGP_LPJ_T0064520.1 MGP_LPJ_G0027969.1 mouse_genomes_project 4 6496980 6514929 + MGP_LPJ_P0064520 Gdf6 protein_coding protein_coding MGP_LPJ_T0011573.1 MGP_LPJ_G0009691.1 mouse_genomes_project 4 30062259 30062526 + Gm24371 misc_RNA misc_RNA MGP_LPJ_T0014662.1 MGP_LPJ_G0012753.1 mouse_genomes_project 4 110394068 110395227 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014476.1 MGP_LPJ_G0012567.1 mouse_genomes_project 4 39165244 39166203 + processed_pseudogene processed_pseudogene MGP_LPJ_T0066121.1 MGP_LPJ_G0028346.1 mouse_genomes_project 4 88943926 88944964 + MGP_LPJ_P0066121 Gm26566 protein_coding protein_coding MGP_LPJ_T0066759.1 MGP_LPJ_G0028484.1 mouse_genomes_project 4 110431218 110453530 + MGP_LPJ_P0066759 Ttc39a protein_coding protein_coding MGP_LPJ_T0066760.1 MGP_LPJ_G0028484.1 mouse_genomes_project 4 110431680 110470041 + MGP_LPJ_P0066760 Ttc39a protein_coding protein_coding MGP_LPJ_T0066761.1 MGP_LPJ_G0028484.1 mouse_genomes_project 4 110431703 110449637 + MGP_LPJ_P0066761 Ttc39a protein_coding protein_coding MGP_LPJ_T0066762.1 MGP_LPJ_G0028484.1 mouse_genomes_project 4 110431722 110448352 + Ttc39a protein_coding processed_transcript MGP_LPJ_T0066763.1 MGP_LPJ_G0028484.1 mouse_genomes_project 4 110439364 110453598 + MGP_LPJ_P0066763 Ttc39a protein_coding protein_coding MGP_LPJ_T0066764.1 MGP_LPJ_G0028484.1 mouse_genomes_project 4 110441076 110469678 + MGP_LPJ_P0066764 Ttc39a protein_coding protein_coding MGP_LPJ_T0066765.1 MGP_LPJ_G0028484.1 mouse_genomes_project 4 110441202 110446790 + Ttc39a protein_coding processed_transcript MGP_LPJ_T0066766.1 MGP_LPJ_G0028484.1 mouse_genomes_project 4 110446354 110451761 + MGP_LPJ_P0066766 Ttc39a protein_coding protein_coding MGP_LPJ_T0099471.1 MGP_LPJ_G0037734.1 mouse_genomes_project 4 31745350 31745458 + Gm25623 snRNA snRNA MGP_LPJ_T0065575.1 MGP_LPJ_G0028211.1 mouse_genomes_project 4 51708336 51721110 + MGP_LPJ_P0065575 Nipsnap3a protein_coding nonsense_mediated_decay MGP_LPJ_T0065576.1 MGP_LPJ_G0028211.1 mouse_genomes_project 4 51708348 51721117 + MGP_LPJ_P0065576 Nipsnap3a protein_coding protein_coding MGP_LPJ_T0065577.1 MGP_LPJ_G0028211.1 mouse_genomes_project 4 51708482 51721425 + MGP_LPJ_P0065577 Nipsnap3a protein_coding protein_coding MGP_LPJ_T0065578.1 MGP_LPJ_G0028211.1 mouse_genomes_project 4 51720526 51721109 + Nipsnap3a protein_coding retained_intron MGP_LPJ_T0014403.1 MGP_LPJ_G0012494.1 mouse_genomes_project 4 18707580 18708379 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010603.1 MGP_LPJ_G0008721.1 mouse_genomes_project 4 34431059 34431136 - Mir873a miRNA miRNA MGP_LPJ_T0014744.1 MGP_LPJ_G0012835.1 mouse_genomes_project 4 137843821 137844011 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007974.1 MGP_LPJ_G0006514.1 mouse_genomes_project 4 130996280 131024937 + Gm12968 lincRNA lincRNA MGP_LPJ_T0007972.1 MGP_LPJ_G0006512.1 mouse_genomes_project 4 129882872 129884408 - 1700112K13Rik lincRNA lincRNA MGP_LPJ_T0007977.1 MGP_LPJ_G0006517.1 mouse_genomes_project 4 131440708 131443763 + Gm12976 lincRNA lincRNA MGP_LPJ_T0007978.1 MGP_LPJ_G0006517.1 mouse_genomes_project 4 131442483 131443763 + Gm12976 lincRNA lincRNA MGP_LPJ_T0099512.1 MGP_LPJ_G0037775.1 mouse_genomes_project 4 117789317 117789427 + Gm25137 snRNA snRNA MGP_LPJ_T0067290.1 MGP_LPJ_G0028605.1 mouse_genomes_project 4 120534616 120550652 + MGP_LPJ_P0067290 P3h1 protein_coding protein_coding MGP_LPJ_T0067291.1 MGP_LPJ_G0028605.1 mouse_genomes_project 4 120534640 120550655 + MGP_LPJ_P0067291 P3h1 protein_coding protein_coding MGP_LPJ_T0067292.1 MGP_LPJ_G0028605.1 mouse_genomes_project 4 120534647 120550047 + P3h1 protein_coding processed_transcript MGP_LPJ_T0067293.1 MGP_LPJ_G0028605.1 mouse_genomes_project 4 120534647 120550652 + MGP_LPJ_P0067293 P3h1 protein_coding protein_coding MGP_LPJ_T0067294.1 MGP_LPJ_G0028605.1 mouse_genomes_project 4 120534655 120550049 + MGP_LPJ_P0067294 P3h1 protein_coding nonsense_mediated_decay MGP_LPJ_T0067295.1 MGP_LPJ_G0028605.1 mouse_genomes_project 4 120534691 120550665 + MGP_LPJ_P0067295 P3h1 protein_coding protein_coding MGP_LPJ_T0067296.1 MGP_LPJ_G0028605.1 mouse_genomes_project 4 120535501 120538616 + P3h1 protein_coding processed_transcript MGP_LPJ_T0067297.1 MGP_LPJ_G0028605.1 mouse_genomes_project 4 120537045 120543181 + P3h1 protein_coding processed_transcript MGP_LPJ_T0067298.1 MGP_LPJ_G0028605.1 mouse_genomes_project 4 120539625 120545835 + P3h1 protein_coding processed_transcript MGP_LPJ_T0067299.1 MGP_LPJ_G0028605.1 mouse_genomes_project 4 120546707 120549813 + P3h1 protein_coding processed_transcript MGP_LPJ_T0067300.1 MGP_LPJ_G0028605.1 mouse_genomes_project 4 120548318 120550052 + P3h1 protein_coding processed_transcript MGP_LPJ_T0067301.1 MGP_LPJ_G0028605.1 mouse_genomes_project 4 120548541 120549734 + P3h1 protein_coding retained_intron MGP_LPJ_T0010592.1 MGP_LPJ_G0008710.1 mouse_genomes_project 4 8732579 8732643 + Gm25002 miRNA miRNA MGP_LPJ_T0067027.1 MGP_LPJ_G0028546.1 mouse_genomes_project 4 117826650 117827852 + MGP_LPJ_P0067027 Ccdc163 protein_coding protein_coding MGP_LPJ_T0067028.1 MGP_LPJ_G0028546.1 mouse_genomes_project 4 117826661 117828329 + MGP_LPJ_P0067028 Ccdc163 protein_coding protein_coding MGP_LPJ_T0067029.1 MGP_LPJ_G0028546.1 mouse_genomes_project 4 117826667 117827807 + Ccdc163 protein_coding processed_transcript MGP_LPJ_T0067030.1 MGP_LPJ_G0028546.1 mouse_genomes_project 4 117826676 117828551 + Ccdc163 protein_coding retained_intron MGP_LPJ_T0067031.1 MGP_LPJ_G0028546.1 mouse_genomes_project 4 117826756 117827555 + MGP_LPJ_P0067031 Ccdc163 protein_coding protein_coding MGP_LPJ_T0067032.1 MGP_LPJ_G0028546.1 mouse_genomes_project 4 117826981 117833416 + MGP_LPJ_P0067032 Ccdc163 protein_coding nonsense_mediated_decay MGP_LPJ_T0067033.1 MGP_LPJ_G0028546.1 mouse_genomes_project 4 117827069 117833270 + MGP_LPJ_P0067033 Ccdc163 protein_coding protein_coding MGP_LPJ_T0067034.1 MGP_LPJ_G0028546.1 mouse_genomes_project 4 117830309 117861038 + Ccdc163 protein_coding processed_transcript MGP_LPJ_T0067035.1 MGP_LPJ_G0028546.1 mouse_genomes_project 4 117830607 117870573 + Ccdc163 protein_coding processed_transcript MGP_LPJ_T0067036.1 MGP_LPJ_G0028546.1 mouse_genomes_project 4 117830674 117833411 + MGP_LPJ_P0067036 Ccdc163 protein_coding protein_coding MGP_LPJ_T0069344.1 MGP_LPJ_G0029081.1 mouse_genomes_project 4 156334647 156344542 + MGP_LPJ_P0069344 Icmt protein_coding protein_coding MGP_LPJ_T0069345.1 MGP_LPJ_G0029081.1 mouse_genomes_project 4 156334724 156344541 + MGP_LPJ_P0069345 Icmt protein_coding nonsense_mediated_decay MGP_LPJ_T0069346.1 MGP_LPJ_G0029081.1 mouse_genomes_project 4 156335076 156338175 + Icmt protein_coding processed_transcript MGP_LPJ_T0069347.1 MGP_LPJ_G0029081.1 mouse_genomes_project 4 156342807 156344489 + Icmt protein_coding processed_transcript MGP_LPJ_T0069055.1 MGP_LPJ_G0029027.1 mouse_genomes_project 4 152136497 152142874 + Mtor protein_coding retained_intron MGP_LPJ_T0069056.1 MGP_LPJ_G0029027.1 mouse_genomes_project 4 152136497 152247578 + MGP_LPJ_P0069056 Mtor protein_coding protein_coding MGP_LPJ_T0069057.1 MGP_LPJ_G0029027.1 mouse_genomes_project 4 152136511 152142878 + MGP_LPJ_P0069057 Mtor protein_coding protein_coding MGP_LPJ_T0069059.1 MGP_LPJ_G0029027.1 mouse_genomes_project 4 152232664 152237636 + Mtor protein_coding retained_intron MGP_LPJ_T0067762.1 MGP_LPJ_G0028724.1 mouse_genomes_project 4 131273105 131279171 + MGP_LPJ_P0067762 Tmem54 protein_coding protein_coding MGP_LPJ_T0067763.1 MGP_LPJ_G0028724.1 mouse_genomes_project 4 131273131 131279171 + MGP_LPJ_P0067763 Tmem54 protein_coding protein_coding MGP_LPJ_T0067764.1 MGP_LPJ_G0028724.1 mouse_genomes_project 4 131273158 131279062 + MGP_LPJ_P0067764 Tmem54 protein_coding protein_coding MGP_LPJ_T0067765.1 MGP_LPJ_G0028724.1 mouse_genomes_project 4 131274426 131278088 + MGP_LPJ_P0067765 Tmem54 protein_coding protein_coding MGP_LPJ_T0069368.1 MGP_LPJ_G0029084.1 mouse_genomes_project 4 156378893 156435926 + MGP_LPJ_P0069368 Chd5 protein_coding protein_coding MGP_LPJ_T0069369.1 MGP_LPJ_G0029084.1 mouse_genomes_project 4 156378893 156435926 + MGP_LPJ_P0069369 Chd5 protein_coding protein_coding MGP_LPJ_T0069370.1 MGP_LPJ_G0029084.1 mouse_genomes_project 4 156380768 156435913 + MGP_LPJ_P0069370 Chd5 protein_coding protein_coding MGP_LPJ_T0069371.1 MGP_LPJ_G0029084.1 mouse_genomes_project 4 156383475 156396765 + Chd5 protein_coding processed_transcript MGP_LPJ_T0069372.1 MGP_LPJ_G0029084.1 mouse_genomes_project 4 156416341 156435913 + Chd5 protein_coding processed_transcript MGP_LPJ_T0067119.1 MGP_LPJ_G0028563.1 mouse_genomes_project 4 118420643 118659672 - MGP_LPJ_P0067119 Rnf220 protein_coding protein_coding MGP_LPJ_T0067120.1 MGP_LPJ_G0028563.1 mouse_genomes_project 4 118426295 118534467 - MGP_LPJ_P0067120 Rnf220 protein_coding protein_coding MGP_LPJ_T0067121.1 MGP_LPJ_G0028563.1 mouse_genomes_project 4 118426672 118443625 - MGP_LPJ_P0067121 Rnf220 protein_coding protein_coding MGP_LPJ_T0067122.1 MGP_LPJ_G0028563.1 mouse_genomes_project 4 118430887 118439843 - Rnf220 protein_coding processed_transcript MGP_LPJ_T0067123.1 MGP_LPJ_G0028563.1 mouse_genomes_project 4 118431795 118444199 - MGP_LPJ_P0067123 Rnf220 protein_coding protein_coding MGP_LPJ_T0067124.1 MGP_LPJ_G0028563.1 mouse_genomes_project 4 118439460 118443811 - Rnf220 protein_coding processed_transcript MGP_LPJ_T0067125.1 MGP_LPJ_G0028563.1 mouse_genomes_project 4 118439747 118443480 - Rnf220 protein_coding processed_transcript MGP_LPJ_T0067126.1 MGP_LPJ_G0028563.1 mouse_genomes_project 4 118440257 118454445 - Rnf220 protein_coding processed_transcript MGP_LPJ_T0067127.1 MGP_LPJ_G0028563.1 mouse_genomes_project 4 118461085 118659569 - Rnf220 protein_coding processed_transcript MGP_LPJ_T0067128.1 MGP_LPJ_G0028563.1 mouse_genomes_project 4 118652877 118657658 - Rnf220 protein_coding processed_transcript MGP_LPJ_T0011585.1 MGP_LPJ_G0009703.1 mouse_genomes_project 4 78478062 78478148 + Gm22262 misc_RNA misc_RNA MGP_LPJ_T0004513.1 MGP_LPJ_G0003926.1 mouse_genomes_project 4 103664772 103688234 - Gm12709 antisense antisense MGP_LPJ_T0066878.1 MGP_LPJ_G0028512.1 mouse_genomes_project 4 116358341 116398569 + MGP_LPJ_P0066878 protein_coding protein_coding MGP_LPJ_T0004495.1 MGP_LPJ_G0003918.1 mouse_genomes_project 4 88962634 88970448 - Gm13274 antisense antisense MGP_LPJ_T0004496.1 MGP_LPJ_G0003918.1 mouse_genomes_project 4 88962727 88970447 - Gm13274 antisense antisense MGP_LPJ_T0014599.1 MGP_LPJ_G0012690.1 mouse_genomes_project 4 89662384 89664815 - processed_pseudogene processed_pseudogene MGP_LPJ_T0068495.1 MGP_LPJ_G0028872.1 mouse_genomes_project 4 138827881 138871414 + MGP_LPJ_P0068495 Asap3 protein_coding protein_coding MGP_LPJ_T0007832.1 MGP_LPJ_G0006401.1 mouse_genomes_project 4 20408801 20544563 + Gm11884 lincRNA lincRNA MGP_LPJ_T0008030.1 MGP_LPJ_G0006553.1 mouse_genomes_project 4 144338298 144339552 + Gm13056 lincRNA lincRNA MGP_LPJ_T0017985.1 MGP_LPJ_G0015454.1 mouse_genomes_project 4 30609945 30615334 - 4933421O10Rik processed_transcript processed_transcript MGP_LPJ_T0004524.1 MGP_LPJ_G0003934.1 mouse_genomes_project 4 108726729 108729678 - Lrp8os1 antisense antisense MGP_LPJ_T0004525.1 MGP_LPJ_G0003934.1 mouse_genomes_project 4 108726750 108729678 - Lrp8os1 antisense antisense MGP_LPJ_T0014421.1 MGP_LPJ_G0012512.1 mouse_genomes_project 4 23699615 23700340 + processed_pseudogene processed_pseudogene MGP_LPJ_T0067225.1 MGP_LPJ_G0028580.1 mouse_genomes_project 4 119665255 119669845 + MGP_LPJ_P0067225 Elovl1 protein_coding protein_coding MGP_LPJ_T0067226.1 MGP_LPJ_G0028580.1 mouse_genomes_project 4 119665352 119666053 + Elovl1 protein_coding processed_transcript MGP_LPJ_T0067227.1 MGP_LPJ_G0028580.1 mouse_genomes_project 4 119665396 119669172 + Elovl1 protein_coding processed_transcript MGP_LPJ_T0067228.1 MGP_LPJ_G0028580.1 mouse_genomes_project 4 119665430 119668297 + Elovl1 protein_coding processed_transcript MGP_LPJ_T0100731.1 MGP_LPJ_G0038994.1 mouse_genomes_project 4 393332 393469 - Gm24125 snoRNA snoRNA MGP_LPJ_T0065432.1 MGP_LPJ_G0028169.1 mouse_genomes_project 4 44494639 44536998 - MGP_LPJ_P0065432 Xpa protein_coding protein_coding MGP_LPJ_T0065435.1 MGP_LPJ_G0028169.1 mouse_genomes_project 4 44514460 44524926 - Xpa protein_coding processed_transcript MGP_LPJ_T0065436.1 MGP_LPJ_G0028169.1 mouse_genomes_project 4 44514460 44524893 - MGP_LPJ_P0065436 Xpa protein_coding nonsense_mediated_decay MGP_LPJ_T0065437.1 MGP_LPJ_G0028169.1 mouse_genomes_project 4 44514460 44536998 - MGP_LPJ_P0065437 Xpa protein_coding protein_coding MGP_LPJ_T0065438.1 MGP_LPJ_G0028169.1 mouse_genomes_project 4 44522212 44536991 - MGP_LPJ_P0065438 Xpa protein_coding protein_coding MGP_LPJ_T0065439.1 MGP_LPJ_G0028169.1 mouse_genomes_project 4 44523655 44525820 - Xpa protein_coding processed_transcript MGP_LPJ_T0068429.1 MGP_LPJ_G0028856.1 mouse_genomes_project 4 138089382 138121130 - MGP_LPJ_P0068429 Grhl3 protein_coding protein_coding MGP_LPJ_T0068430.1 MGP_LPJ_G0028856.1 mouse_genomes_project 4 138090153 138120924 - MGP_LPJ_P0068430 Grhl3 protein_coding unknown_likely_coding MGP_LPJ_T0068663.1 MGP_LPJ_G0028912.1 mouse_genomes_project 4 141610101 141617195 - MGP_LPJ_P0068663 Pla2g2f protein_coding protein_coding MGP_LPJ_T0067379.1 MGP_LPJ_G0028621.1 mouse_genomes_project 4 121917441 121921872 + MGP_LPJ_P0067379 Slfnl1 protein_coding protein_coding MGP_LPJ_T0068445.1 MGP_LPJ_G0028861.1 mouse_genomes_project 4 138456701 138459627 - MGP_LPJ_P0068445 Pnrc2 protein_coding protein_coding MGP_LPJ_T0068446.1 MGP_LPJ_G0028861.1 mouse_genomes_project 4 138458100 138459347 - MGP_LPJ_P0068446 Pnrc2 protein_coding protein_coding MGP_LPJ_T0068447.1 MGP_LPJ_G0028861.1 mouse_genomes_project 4 138458227 138458838 - MGP_LPJ_P0068447 Pnrc2 protein_coding protein_coding MGP_LPJ_T0014404.1 MGP_LPJ_G0012495.1 mouse_genomes_project 4 18761882 18762151 + processed_pseudogene processed_pseudogene MGP_LPJ_T0068928.1 MGP_LPJ_G0028979.1 mouse_genomes_project 4 146653994 146659886 + MGP_LPJ_P0068928 Pramel1 protein_coding protein_coding MGP_LPJ_T0065743.1 MGP_LPJ_G0028255.1 mouse_genomes_project 4 58826545 58948450 + MGP_LPJ_P0065743 Snx30 protein_coding protein_coding MGP_LPJ_T0065744.1 MGP_LPJ_G0028255.1 mouse_genomes_project 4 58826585 58855409 + Snx30 protein_coding processed_transcript MGP_LPJ_T0065745.1 MGP_LPJ_G0028255.1 mouse_genomes_project 4 58928390 58944238 + Snx30 protein_coding processed_transcript MGP_LPJ_T0065746.1 MGP_LPJ_G0028255.1 mouse_genomes_project 4 58928476 58938262 + Snx30 protein_coding processed_transcript MGP_LPJ_T0014348.1 MGP_LPJ_G0012439.1 mouse_genomes_project 4 2171749 2172221 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008015.1 MGP_LPJ_G0006539.1 mouse_genomes_project 4 139808109 139809110 - Gm13001 lincRNA lincRNA MGP_LPJ_T0065561.1 MGP_LPJ_G0028205.1 mouse_genomes_project 4 51116990 51184718 + MGP_LPJ_P0065561 Smc2 protein_coding protein_coding MGP_LPJ_T0065562.1 MGP_LPJ_G0028205.1 mouse_genomes_project 4 51116990 51184718 + MGP_LPJ_P0065562 Smc2 protein_coding protein_coding MGP_LPJ_T0065563.1 MGP_LPJ_G0028205.1 mouse_genomes_project 4 51116999 51125341 + Smc2 protein_coding processed_transcript MGP_LPJ_T0065564.1 MGP_LPJ_G0028205.1 mouse_genomes_project 4 51117013 51130052 + Smc2 protein_coding processed_transcript MGP_LPJ_T0065565.1 MGP_LPJ_G0028205.1 mouse_genomes_project 4 51117016 51137298 + MGP_LPJ_P0065565 Smc2 protein_coding protein_coding MGP_LPJ_T0010611.1 MGP_LPJ_G0008729.1 mouse_genomes_project 4 42452864 42452937 - Mir5106 miRNA miRNA MGP_LPJ_T0014359.1 MGP_LPJ_G0012450.1 mouse_genomes_project 4 6614715 6615638 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099541.1 MGP_LPJ_G0037804.1 mouse_genomes_project 4 152129564 152129716 - Gm23303 snRNA snRNA MGP_LPJ_T0067953.1 MGP_LPJ_G0028757.1 mouse_genomes_project 4 132482043 132492367 - MGP_LPJ_P0067953 Tinagl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0067954.1 MGP_LPJ_G0028757.1 mouse_genomes_project 4 132483148 132492367 - MGP_LPJ_P0067954 Tinagl1 protein_coding protein_coding MGP_LPJ_T0067955.1 MGP_LPJ_G0028757.1 mouse_genomes_project 4 132483150 132484158 - Tinagl1 protein_coding retained_intron MGP_LPJ_T0067956.1 MGP_LPJ_G0028757.1 mouse_genomes_project 4 132483150 132492357 - MGP_LPJ_P0067956 Tinagl1 protein_coding protein_coding MGP_LPJ_T0067957.1 MGP_LPJ_G0028757.1 mouse_genomes_project 4 132483265 132492687 - MGP_LPJ_P0067957 Tinagl1 protein_coding protein_coding MGP_LPJ_T0067958.1 MGP_LPJ_G0028757.1 mouse_genomes_project 4 132484523 132487042 - Tinagl1 protein_coding retained_intron MGP_LPJ_T0067959.1 MGP_LPJ_G0028757.1 mouse_genomes_project 4 132486670 132492256 - MGP_LPJ_P0067959 Tinagl1 protein_coding protein_coding MGP_LPJ_T0067960.1 MGP_LPJ_G0028757.1 mouse_genomes_project 4 132488964 132492357 - Tinagl1 protein_coding processed_transcript MGP_LPJ_T0067961.1 MGP_LPJ_G0028757.1 mouse_genomes_project 4 132491274 132492385 - Tinagl1 protein_coding retained_intron MGP_LPJ_T0014365.1 MGP_LPJ_G0012456.1 mouse_genomes_project 4 7857696 7857978 + processed_pseudogene processed_pseudogene MGP_LPJ_T0069621.1 MGP_LPJ_G0029128.1 mouse_genomes_project 4 160008681 160032687 - MGP_LPJ_P0069621 protein_coding protein_coding MGP_LPJ_T0069622.1 MGP_LPJ_G0029128.1 mouse_genomes_project 4 160008874 160014386 - protein_coding retained_intron MGP_LPJ_T0069623.1 MGP_LPJ_G0029128.1 mouse_genomes_project 4 160022044 160027668 - MGP_LPJ_P0069623 protein_coding nonsense_mediated_decay MGP_LPJ_T0069624.1 MGP_LPJ_G0029128.1 mouse_genomes_project 4 160022346 160026368 - MGP_LPJ_P0069624 protein_coding nonsense_mediated_decay MGP_LPJ_T0069625.1 MGP_LPJ_G0029128.1 mouse_genomes_project 4 160023326 160032522 - MGP_LPJ_P0069625 protein_coding nonsense_mediated_decay MGP_LPJ_T0069626.1 MGP_LPJ_G0029128.1 mouse_genomes_project 4 160025216 160032662 - MGP_LPJ_P0069626 protein_coding nonsense_mediated_decay MGP_LPJ_T0069627.1 MGP_LPJ_G0029128.1 mouse_genomes_project 4 160027429 160032681 - protein_coding retained_intron MGP_LPJ_T0001459.1 MGP_LPJ_G0001376.1 mouse_genomes_project 4 145996750 145996969 + TEC TEC MGP_LPJ_T0007892.1 MGP_LPJ_G0006454.1 mouse_genomes_project 4 81975403 82013260 + Gm5860 lincRNA lincRNA MGP_LPJ_T0007893.1 MGP_LPJ_G0006454.1 mouse_genomes_project 4 81975845 81977716 + Gm5860 lincRNA lincRNA MGP_LPJ_T0007894.1 MGP_LPJ_G0006454.1 mouse_genomes_project 4 81975929 82013232 + Gm5860 lincRNA lincRNA MGP_LPJ_T0067567.1 MGP_LPJ_G0028678.1 mouse_genomes_project 4 127385509 127613993 + MGP_LPJ_P0067567 Grik3 protein_coding protein_coding MGP_LPJ_T0065399.1 MGP_LPJ_G0028161.1 mouse_genomes_project 4 44112780 44120995 + MGP_LPJ_P0065399 Aldh1b1 protein_coding protein_coding MGP_LPJ_T0065400.1 MGP_LPJ_G0028161.1 mouse_genomes_project 4 44112879 44119249 + MGP_LPJ_P0065400 Aldh1b1 protein_coding protein_coding MGP_LPJ_T0069580.1 MGP_LPJ_G0029119.1 mouse_genomes_project 4 159823029 159854535 + MGP_LPJ_P0069580 Nadk protein_coding protein_coding MGP_LPJ_T0069581.1 MGP_LPJ_G0029119.1 mouse_genomes_project 4 159824343 159854539 + MGP_LPJ_P0069581 Nadk protein_coding protein_coding MGP_LPJ_T0069582.1 MGP_LPJ_G0029119.1 mouse_genomes_project 4 159824469 159840634 + Nadk protein_coding processed_transcript MGP_LPJ_T0069583.1 MGP_LPJ_G0029119.1 mouse_genomes_project 4 159824485 159840628 + MGP_LPJ_P0069583 Nadk protein_coding protein_coding MGP_LPJ_T0069584.1 MGP_LPJ_G0029119.1 mouse_genomes_project 4 159824551 159842924 + MGP_LPJ_P0069584 Nadk protein_coding protein_coding MGP_LPJ_T0069585.1 MGP_LPJ_G0029119.1 mouse_genomes_project 4 159824715 159842878 + MGP_LPJ_P0069585 Nadk protein_coding protein_coding MGP_LPJ_T0069586.1 MGP_LPJ_G0029119.1 mouse_genomes_project 4 159846032 159854539 + MGP_LPJ_P0069586 Nadk protein_coding protein_coding MGP_LPJ_T0069587.1 MGP_LPJ_G0029119.1 mouse_genomes_project 4 159850314 159853158 + Nadk protein_coding processed_transcript MGP_LPJ_T0008037.1 MGP_LPJ_G0006560.1 mouse_genomes_project 4 153594071 153602945 + Gm16188 lincRNA lincRNA MGP_LPJ_T0068015.1 MGP_LPJ_G0028770.1 mouse_genomes_project 4 134106103 134137354 + MGP_LPJ_P0068015 Mecr protein_coding protein_coding MGP_LPJ_T0068016.1 MGP_LPJ_G0028770.1 mouse_genomes_project 4 134106126 134130444 + MGP_LPJ_P0068016 Mecr protein_coding protein_coding MGP_LPJ_T0068017.1 MGP_LPJ_G0028770.1 mouse_genomes_project 4 134106138 134106642 + Mecr protein_coding processed_transcript MGP_LPJ_T0068018.1 MGP_LPJ_G0028770.1 mouse_genomes_project 4 134121675 134130579 + Mecr protein_coding processed_transcript MGP_LPJ_T0068019.1 MGP_LPJ_G0028770.1 mouse_genomes_project 4 134121734 134126156 + Mecr protein_coding processed_transcript MGP_LPJ_T0068020.1 MGP_LPJ_G0028770.1 mouse_genomes_project 4 134125721 134134912 + Mecr protein_coding processed_transcript MGP_LPJ_T0068021.1 MGP_LPJ_G0028770.1 mouse_genomes_project 4 134125747 134137354 + Mecr protein_coding processed_transcript MGP_LPJ_T0068022.1 MGP_LPJ_G0028770.1 mouse_genomes_project 4 134129813 134134654 + Mecr protein_coding processed_transcript MGP_LPJ_T0068023.1 MGP_LPJ_G0028770.1 mouse_genomes_project 4 134131290 134137169 + Mecr protein_coding processed_transcript MGP_LPJ_T0068024.1 MGP_LPJ_G0028770.1 mouse_genomes_project 4 134134357 134137344 + Mecr protein_coding processed_transcript MGP_LPJ_T0100741.1 MGP_LPJ_G0039004.1 mouse_genomes_project 4 25784790 25784919 + Gm25378 snoRNA snoRNA MGP_LPJ_T0004612.1 MGP_LPJ_G0004003.1 mouse_genomes_project 4 152686559 152687982 - Gm13205 antisense antisense MGP_LPJ_T0014414.1 MGP_LPJ_G0012505.1 mouse_genomes_project 4 21638330 21640046 + processed_pseudogene processed_pseudogene MGP_LPJ_T0066049.1 MGP_LPJ_G0028324.1 mouse_genomes_project 4 86537787 86636860 - Saxo1 protein_coding processed_transcript MGP_LPJ_T0066050.1 MGP_LPJ_G0028324.1 mouse_genomes_project 4 86537787 86656020 - MGP_LPJ_P0066050 Saxo1 protein_coding protein_coding MGP_LPJ_T0066051.1 MGP_LPJ_G0028324.1 mouse_genomes_project 4 86564822 86655712 - Saxo1 protein_coding processed_transcript MGP_LPJ_T0066052.1 MGP_LPJ_G0028324.1 mouse_genomes_project 4 86567410 86656045 - Saxo1 protein_coding processed_transcript MGP_LPJ_T0067756.1 MGP_LPJ_G0028723.1 mouse_genomes_project 4 131224540 131250615 + MGP_LPJ_P0067756 Rnf19b protein_coding protein_coding MGP_LPJ_T0067757.1 MGP_LPJ_G0028723.1 mouse_genomes_project 4 131224540 131251824 + MGP_LPJ_P0067757 Rnf19b protein_coding protein_coding MGP_LPJ_T0067758.1 MGP_LPJ_G0028723.1 mouse_genomes_project 4 131224678 131246642 + MGP_LPJ_P0067758 Rnf19b protein_coding protein_coding MGP_LPJ_T0067759.1 MGP_LPJ_G0028723.1 mouse_genomes_project 4 131225083 131250615 + MGP_LPJ_P0067759 Rnf19b protein_coding protein_coding MGP_LPJ_T0067760.1 MGP_LPJ_G0028723.1 mouse_genomes_project 4 131245063 131251975 + MGP_LPJ_P0067760 Rnf19b protein_coding protein_coding MGP_LPJ_T0067761.1 MGP_LPJ_G0028723.1 mouse_genomes_project 4 131249973 131251975 + Rnf19b protein_coding processed_transcript MGP_LPJ_T0014515.1 MGP_LPJ_G0012606.1 mouse_genomes_project 4 53617447 53619032 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007825.1 MGP_LPJ_G0006395.1 mouse_genomes_project 4 11106847 11121630 - 1700120G11Rik lincRNA lincRNA MGP_LPJ_T0068938.1 MGP_LPJ_G0028984.1 mouse_genomes_project 4 146996215 146998501 + MGP_LPJ_P0068938 protein_coding protein_coding MGP_LPJ_T0099508.1 MGP_LPJ_G0037771.1 mouse_genomes_project 4 109513052 109513159 - Gm25827 snRNA snRNA MGP_LPJ_T0065527.1 MGP_LPJ_G0028193.1 mouse_genomes_project 4 47580426 47732158 + Plppr1 protein_coding retained_intron MGP_LPJ_T0065528.1 MGP_LPJ_G0028193.1 mouse_genomes_project 4 47580629 47824931 + Plppr1 protein_coding retained_intron MGP_LPJ_T0065529.1 MGP_LPJ_G0028193.1 mouse_genomes_project 4 47729990 47949625 + MGP_LPJ_P0065529 Plppr1 protein_coding protein_coding MGP_LPJ_T0066294.1 MGP_LPJ_G0028391.1 mouse_genomes_project 4 99559366 99567520 + MGP_LPJ_P0066294 Angptl3 protein_coding protein_coding MGP_LPJ_T0066295.1 MGP_LPJ_G0028391.1 mouse_genomes_project 4 99561591 99567414 + Angptl3 protein_coding processed_transcript MGP_LPJ_T0066296.1 MGP_LPJ_G0028391.1 mouse_genomes_project 4 99561615 99575590 + Angptl3 protein_coding processed_transcript MGP_LPJ_T0008026.1 MGP_LPJ_G0006549.1 mouse_genomes_project 4 143398539 143405827 + Gm13021 lincRNA lincRNA MGP_LPJ_T0007914.1 MGP_LPJ_G0006471.1 mouse_genomes_project 4 95796644 95797457 - Gm29064 lincRNA lincRNA MGP_LPJ_T0065224.1 MGP_LPJ_G0028126.1 mouse_genomes_project 4 41745441 41757051 - Gba2 protein_coding retained_intron MGP_LPJ_T0065225.1 MGP_LPJ_G0028126.1 mouse_genomes_project 4 41745441 41756603 - Gba2 protein_coding retained_intron MGP_LPJ_T0065226.1 MGP_LPJ_G0028126.1 mouse_genomes_project 4 41745441 41757387 - MGP_LPJ_P0065226 Gba2 protein_coding protein_coding MGP_LPJ_T0065227.1 MGP_LPJ_G0028126.1 mouse_genomes_project 4 41745442 41756603 - Gba2 protein_coding retained_intron MGP_LPJ_T0065228.1 MGP_LPJ_G0028126.1 mouse_genomes_project 4 41746907 41748156 - Gba2 protein_coding retained_intron MGP_LPJ_T0065229.1 MGP_LPJ_G0028126.1 mouse_genomes_project 4 41748869 41752568 - Gba2 protein_coding processed_transcript MGP_LPJ_T0065230.1 MGP_LPJ_G0028126.1 mouse_genomes_project 4 41749275 41757150 - MGP_LPJ_P0065230 Gba2 protein_coding protein_coding MGP_LPJ_T0099475.1 MGP_LPJ_G0037738.1 mouse_genomes_project 4 37893839 37893901 - Gm26087 snRNA snRNA MGP_LPJ_T0098263.1 MGP_LPJ_G0036544.1 mouse_genomes_project 4 126673424 126673543 + n-R5s192 rRNA rRNA MGP_LPJ_T0014464.1 MGP_LPJ_G0012555.1 mouse_genomes_project 4 36121002 36121546 + processed_pseudogene processed_pseudogene MGP_LPJ_T0064575.1 MGP_LPJ_G0027980.1 mouse_genomes_project 4 8332128 8341615 + MGP_LPJ_P0064575 Fsbp protein_coding protein_coding MGP_LPJ_T0067019.1 MGP_LPJ_G0028544.1 mouse_genomes_project 4 117801741 117819308 + MGP_LPJ_P0067019 Prdx1 protein_coding protein_coding MGP_LPJ_T0067020.1 MGP_LPJ_G0028544.1 mouse_genomes_project 4 117801796 117804094 + Prdx1 protein_coding retained_intron MGP_LPJ_T0067021.1 MGP_LPJ_G0028544.1 mouse_genomes_project 4 117801796 117810037 + MGP_LPJ_P0067021 Prdx1 protein_coding protein_coding MGP_LPJ_T0067022.1 MGP_LPJ_G0028544.1 mouse_genomes_project 4 117802058 117809187 + MGP_LPJ_P0067022 Prdx1 protein_coding protein_coding MGP_LPJ_T0067023.1 MGP_LPJ_G0028544.1 mouse_genomes_project 4 117802084 117815467 + MGP_LPJ_P0067023 Prdx1 protein_coding protein_coding MGP_LPJ_T0067024.1 MGP_LPJ_G0028544.1 mouse_genomes_project 4 117803508 117815381 + MGP_LPJ_P0067024 Prdx1 protein_coding protein_coding MGP_LPJ_T0099510.1 MGP_LPJ_G0037773.1 mouse_genomes_project 4 110001204 110001309 - Gm23589 snRNA snRNA MGP_LPJ_T0014658.1 MGP_LPJ_G0012749.1 mouse_genomes_project 4 109423605 109424141 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099514.1 MGP_LPJ_G0037777.1 mouse_genomes_project 4 118158113 118158212 + Gm22335 snRNA snRNA MGP_LPJ_T0068772.1 MGP_LPJ_G0028941.1 mouse_genomes_project 4 143827206 143869439 - MGP_LPJ_P0068772 Padi1 protein_coding protein_coding MGP_LPJ_T0004460.1 MGP_LPJ_G0003886.1 mouse_genomes_project 4 37321457 37376318 - Gm17094 antisense antisense MGP_LPJ_T0014439.1 MGP_LPJ_G0012530.1 mouse_genomes_project 4 28190113 28190676 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099528.1 MGP_LPJ_G0037791.1 mouse_genomes_project 4 134562889 134563023 - Rnu11 snRNA snRNA MGP_LPJ_T0004616.1 MGP_LPJ_G0004005.1 mouse_genomes_project 4 153097972 153099239 + Ube4bos3 antisense antisense MGP_LPJ_T0010662.1 MGP_LPJ_G0008780.1 mouse_genomes_project 4 140964915 140964999 + Mir6399 miRNA miRNA MGP_LPJ_T0014750.1 MGP_LPJ_G0012841.1 mouse_genomes_project 4 138592759 138594603 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099487.1 MGP_LPJ_G0037750.1 mouse_genomes_project 4 62879935 62880042 - Gm24448 snRNA snRNA MGP_LPJ_T0068561.1 MGP_LPJ_G0028895.1 mouse_genomes_project 4 140332913 140346390 + MGP_LPJ_P0068561 Usp48 protein_coding protein_coding MGP_LPJ_T0068562.1 MGP_LPJ_G0028895.1 mouse_genomes_project 4 140333298 140402213 + MGP_LPJ_P0068562 Usp48 protein_coding protein_coding MGP_LPJ_T0068563.1 MGP_LPJ_G0028895.1 mouse_genomes_project 4 140333365 140366764 + MGP_LPJ_P0068563 Usp48 protein_coding protein_coding MGP_LPJ_T0068564.1 MGP_LPJ_G0028895.1 mouse_genomes_project 4 140333365 140402213 + MGP_LPJ_P0068564 Usp48 protein_coding protein_coding MGP_LPJ_T0068565.1 MGP_LPJ_G0028895.1 mouse_genomes_project 4 140333386 140366764 + MGP_LPJ_P0068565 Usp48 protein_coding protein_coding MGP_LPJ_T0068566.1 MGP_LPJ_G0028895.1 mouse_genomes_project 4 140359943 140366764 + MGP_LPJ_P0068566 Usp48 protein_coding protein_coding MGP_LPJ_T0068567.1 MGP_LPJ_G0028895.1 mouse_genomes_project 4 140361200 140364843 + Usp48 protein_coding processed_transcript MGP_LPJ_T0068568.1 MGP_LPJ_G0028895.1 mouse_genomes_project 4 140362631 140375613 + Usp48 protein_coding processed_transcript MGP_LPJ_T0068569.1 MGP_LPJ_G0028895.1 mouse_genomes_project 4 140364843 140376047 + MGP_LPJ_P0068569 Usp48 protein_coding protein_coding MGP_LPJ_T0068570.1 MGP_LPJ_G0028895.1 mouse_genomes_project 4 140366635 140402219 + Usp48 protein_coding processed_transcript MGP_LPJ_T0068571.1 MGP_LPJ_G0028895.1 mouse_genomes_project 4 140375786 140398938 + MGP_LPJ_P0068571 Usp48 protein_coding protein_coding MGP_LPJ_T0068572.1 MGP_LPJ_G0028895.1 mouse_genomes_project 4 140375857 140379854 + MGP_LPJ_P0068572 Usp48 protein_coding protein_coding MGP_LPJ_T0068573.1 MGP_LPJ_G0028895.1 mouse_genomes_project 4 140376261 140396689 + MGP_LPJ_P0068573 Usp48 protein_coding protein_coding MGP_LPJ_T0068574.1 MGP_LPJ_G0028895.1 mouse_genomes_project 4 140388023 140398931 + MGP_LPJ_P0068574 Usp48 protein_coding protein_coding MGP_LPJ_T0068575.1 MGP_LPJ_G0028895.1 mouse_genomes_project 4 140388108 140396523 + MGP_LPJ_P0068575 Usp48 protein_coding protein_coding MGP_LPJ_T0068576.1 MGP_LPJ_G0028895.1 mouse_genomes_project 4 140393983 140400014 + MGP_LPJ_P0068576 Usp48 protein_coding protein_coding MGP_LPJ_T0068577.1 MGP_LPJ_G0028895.1 mouse_genomes_project 4 140401076 140402212 + Usp48 protein_coding processed_transcript MGP_LPJ_T0014698.1 MGP_LPJ_G0012789.1 mouse_genomes_project 4 120846379 120846756 + processed_pseudogene processed_pseudogene MGP_LPJ_T0068966.1 MGP_LPJ_G0029005.1 mouse_genomes_project 4 148394033 148623980 - MGP_LPJ_P0068966 Vps13d protein_coding protein_coding MGP_LPJ_T0068967.1 MGP_LPJ_G0029005.1 mouse_genomes_project 4 148394037 148619637 - MGP_LPJ_P0068967 Vps13d protein_coding protein_coding MGP_LPJ_T0068968.1 MGP_LPJ_G0029005.1 mouse_genomes_project 4 148394037 148516305 - MGP_LPJ_P0068968 Vps13d protein_coding nonsense_mediated_decay MGP_LPJ_T0068969.1 MGP_LPJ_G0029005.1 mouse_genomes_project 4 148396009 148582064 - MGP_LPJ_P0068969 Vps13d protein_coding protein_coding MGP_LPJ_T0068970.1 MGP_LPJ_G0029005.1 mouse_genomes_project 4 148396339 148405370 - Vps13d protein_coding processed_transcript MGP_LPJ_T0068971.1 MGP_LPJ_G0029005.1 mouse_genomes_project 4 148401717 148477929 - Vps13d protein_coding retained_intron MGP_LPJ_T0068972.1 MGP_LPJ_G0029005.1 mouse_genomes_project 4 148439449 148474818 - Vps13d protein_coding processed_transcript MGP_LPJ_T0068973.1 MGP_LPJ_G0029005.1 mouse_genomes_project 4 148476765 148482542 - Vps13d protein_coding retained_intron MGP_LPJ_T0068974.1 MGP_LPJ_G0029005.1 mouse_genomes_project 4 148494307 148496948 - Vps13d protein_coding retained_intron MGP_LPJ_T0068975.1 MGP_LPJ_G0029005.1 mouse_genomes_project 4 148603321 148623970 - Vps13d protein_coding retained_intron MGP_LPJ_T0065693.1 MGP_LPJ_G0028241.1 mouse_genomes_project 4 57736221 57737163 - MGP_LPJ_P0065693 Olfr267 protein_coding protein_coding MGP_LPJ_T0066900.1 MGP_LPJ_G0028520.1 mouse_genomes_project 4 116847034 116848219 - MGP_LPJ_P0066900 Tex38 protein_coding protein_coding MGP_LPJ_T0068415.1 MGP_LPJ_G0028853.1 mouse_genomes_project 4 137956530 137978838 - MGP_LPJ_P0068415 Rcan3 protein_coding protein_coding MGP_LPJ_T0068416.1 MGP_LPJ_G0028853.1 mouse_genomes_project 4 137956531 137970412 - MGP_LPJ_P0068416 Rcan3 protein_coding protein_coding MGP_LPJ_T0068417.1 MGP_LPJ_G0028853.1 mouse_genomes_project 4 137962657 137978808 - MGP_LPJ_P0068417 Rcan3 protein_coding protein_coding MGP_LPJ_T0068315.1 MGP_LPJ_G0028832.1 mouse_genomes_project 4 136707296 136719554 - MGP_LPJ_P0068315 Pdik1l protein_coding protein_coding MGP_LPJ_T0068316.1 MGP_LPJ_G0028832.1 mouse_genomes_project 4 136707296 136720210 - MGP_LPJ_P0068316 Pdik1l protein_coding protein_coding MGP_LPJ_T0068317.1 MGP_LPJ_G0028832.1 mouse_genomes_project 4 136707297 136719568 - MGP_LPJ_P0068317 Pdik1l protein_coding protein_coding MGP_LPJ_T0068318.1 MGP_LPJ_G0028832.1 mouse_genomes_project 4 136710826 136719540 - MGP_LPJ_P0068318 Pdik1l protein_coding protein_coding MGP_LPJ_T0068319.1 MGP_LPJ_G0028832.1 mouse_genomes_project 4 136711640 136719565 - MGP_LPJ_P0068319 Pdik1l protein_coding protein_coding MGP_LPJ_T0068320.1 MGP_LPJ_G0028832.1 mouse_genomes_project 4 136715885 136719540 - Pdik1l protein_coding processed_transcript MGP_LPJ_T0014428.1 MGP_LPJ_G0012519.1 mouse_genomes_project 4 25453888 25454911 + processed_pseudogene processed_pseudogene MGP_LPJ_T0065484.1 MGP_LPJ_G0028182.1 mouse_genomes_project 4 45785625 45844236 + MGP_LPJ_P0065484 Tgfbr1 protein_coding protein_coding MGP_LPJ_T0065485.1 MGP_LPJ_G0028182.1 mouse_genomes_project 4 45785630 45842880 + MGP_LPJ_P0065485 Tgfbr1 protein_coding protein_coding MGP_LPJ_T0065486.1 MGP_LPJ_G0028182.1 mouse_genomes_project 4 45785916 45793632 + Tgfbr1 protein_coding processed_transcript MGP_LPJ_T0065487.1 MGP_LPJ_G0028182.1 mouse_genomes_project 4 45818547 45843138 + MGP_LPJ_P0065487 Tgfbr1 protein_coding protein_coding MGP_LPJ_T0067535.1 MGP_LPJ_G0028668.1 mouse_genomes_project 4 126704103 126708413 + MGP_LPJ_P0067535 Yrdc protein_coding protein_coding MGP_LPJ_T0067536.1 MGP_LPJ_G0028668.1 mouse_genomes_project 4 126705234 126708056 + Yrdc protein_coding retained_intron MGP_LPJ_T0065077.1 MGP_LPJ_G0028108.1 mouse_genomes_project 4 41125757 41147829 - MGP_LPJ_P0065077 Vcp protein_coding protein_coding MGP_LPJ_T0065078.1 MGP_LPJ_G0028108.1 mouse_genomes_project 4 41130163 41131619 - Vcp protein_coding processed_transcript MGP_LPJ_T0065079.1 MGP_LPJ_G0028108.1 mouse_genomes_project 4 41131961 41135050 - Vcp protein_coding processed_transcript MGP_LPJ_T0065080.1 MGP_LPJ_G0028108.1 mouse_genomes_project 4 41138386 41141080 - Vcp protein_coding processed_transcript MGP_LPJ_T0065081.1 MGP_LPJ_G0028108.1 mouse_genomes_project 4 41141033 41147755 - Vcp protein_coding processed_transcript MGP_LPJ_T0007884.1 MGP_LPJ_G0006446.1 mouse_genomes_project 4 63578880 63601809 - Gm11217 lincRNA lincRNA MGP_LPJ_T0068225.1 MGP_LPJ_G0028816.1 mouse_genomes_project 4 136243608 136285885 - MGP_LPJ_P0068225 Rps6ka1 protein_coding protein_coding MGP_LPJ_T0068226.1 MGP_LPJ_G0028816.1 mouse_genomes_project 4 136243617 136286037 - MGP_LPJ_P0068226 Rps6ka1 protein_coding protein_coding MGP_LPJ_T0068227.1 MGP_LPJ_G0028816.1 mouse_genomes_project 4 136243617 136272986 - MGP_LPJ_P0068227 Rps6ka1 protein_coding protein_coding MGP_LPJ_T0068228.1 MGP_LPJ_G0028816.1 mouse_genomes_project 4 136244139 136270571 - MGP_LPJ_P0068228 Rps6ka1 protein_coding protein_coding MGP_LPJ_T0068229.1 MGP_LPJ_G0028816.1 mouse_genomes_project 4 136244371 136271286 - MGP_LPJ_P0068229 Rps6ka1 protein_coding protein_coding MGP_LPJ_T0068230.1 MGP_LPJ_G0028816.1 mouse_genomes_project 4 136246783 136256676 - Rps6ka1 protein_coding retained_intron MGP_LPJ_T0068231.1 MGP_LPJ_G0028816.1 mouse_genomes_project 4 136255913 136256788 - Rps6ka1 protein_coding retained_intron MGP_LPJ_T0068232.1 MGP_LPJ_G0028816.1 mouse_genomes_project 4 136270221 136285827 - Rps6ka1 protein_coding processed_transcript MGP_LPJ_T0098257.1 MGP_LPJ_G0036538.1 mouse_genomes_project 4 52623735 52623854 + n-R5s185 rRNA rRNA MGP_LPJ_T0014731.1 MGP_LPJ_G0012822.1 mouse_genomes_project 4 131573124 131573460 + processed_pseudogene processed_pseudogene MGP_LPJ_T0068051.1 MGP_LPJ_G0028775.1 mouse_genomes_project 4 134392879 134427775 - MGP_LPJ_P0068051 Oprd1 protein_coding protein_coding MGP_LPJ_T0065218.1 MGP_LPJ_G0028125.1 mouse_genomes_project 4 41740845 41745574 + MGP_LPJ_P0065218 Creb3 protein_coding protein_coding MGP_LPJ_T0065219.1 MGP_LPJ_G0028125.1 mouse_genomes_project 4 41741326 41745311 + MGP_LPJ_P0065219 Creb3 protein_coding protein_coding MGP_LPJ_T0065220.1 MGP_LPJ_G0028125.1 mouse_genomes_project 4 41741460 41743830 + MGP_LPJ_P0065220 Creb3 protein_coding protein_coding MGP_LPJ_T0065221.1 MGP_LPJ_G0028125.1 mouse_genomes_project 4 41741780 41745041 + Creb3 protein_coding retained_intron MGP_LPJ_T0065222.1 MGP_LPJ_G0028125.1 mouse_genomes_project 4 41741943 41744064 + Creb3 protein_coding retained_intron MGP_LPJ_T0065223.1 MGP_LPJ_G0028125.1 mouse_genomes_project 4 41744528 41745218 + Creb3 protein_coding retained_intron MGP_LPJ_T0069656.1 MGP_LPJ_G0029136.1 mouse_genomes_project 4 160145325 160157238 + MGP_LPJ_P0069656 Dvl1 protein_coding protein_coding MGP_LPJ_T0069657.1 MGP_LPJ_G0029136.1 mouse_genomes_project 4 160145384 160156813 + MGP_LPJ_P0069657 Dvl1 protein_coding protein_coding MGP_LPJ_T0069658.1 MGP_LPJ_G0029136.1 mouse_genomes_project 4 160145389 160157237 + Dvl1 protein_coding retained_intron MGP_LPJ_T0069659.1 MGP_LPJ_G0029136.1 mouse_genomes_project 4 160145489 160157238 + Dvl1 protein_coding retained_intron MGP_LPJ_T0069660.1 MGP_LPJ_G0029136.1 mouse_genomes_project 4 160145509 160157238 + Dvl1 protein_coding retained_intron MGP_LPJ_T0069661.1 MGP_LPJ_G0029136.1 mouse_genomes_project 4 160145594 160157238 + Dvl1 protein_coding retained_intron MGP_LPJ_T0069662.1 MGP_LPJ_G0029136.1 mouse_genomes_project 4 160151346 160151888 + Dvl1 protein_coding processed_transcript MGP_LPJ_T0069663.1 MGP_LPJ_G0029136.1 mouse_genomes_project 4 160152507 160154167 + Dvl1 protein_coding retained_intron MGP_LPJ_T0007826.1 MGP_LPJ_G0006396.1 mouse_genomes_project 4 13406691 13453795 + Gm11861 lincRNA lincRNA MGP_LPJ_T0069487.1 MGP_LPJ_G0029105.1 mouse_genomes_project 4 159132784 159138781 - MGP_LPJ_P0069487 Tnfrsf14 protein_coding protein_coding MGP_LPJ_T0069488.1 MGP_LPJ_G0029105.1 mouse_genomes_project 4 159132784 159138656 - MGP_LPJ_P0069488 Tnfrsf14 protein_coding protein_coding MGP_LPJ_T0069489.1 MGP_LPJ_G0029105.1 mouse_genomes_project 4 159132818 159138625 - MGP_LPJ_P0069489 Tnfrsf14 protein_coding unknown_likely_coding MGP_LPJ_T0069490.1 MGP_LPJ_G0029105.1 mouse_genomes_project 4 159132835 159139131 - MGP_LPJ_P0069490 Tnfrsf14 protein_coding protein_coding MGP_LPJ_T0069491.1 MGP_LPJ_G0029105.1 mouse_genomes_project 4 159135045 159139131 - Tnfrsf14 protein_coding processed_transcript MGP_LPJ_T0069492.1 MGP_LPJ_G0029105.1 mouse_genomes_project 4 159137206 159139142 - Tnfrsf14 protein_coding processed_transcript MGP_LPJ_T0066576.1 MGP_LPJ_G0028453.1 mouse_genomes_project 4 108252530 108306572 + MGP_LPJ_P0066576 Ndc1 protein_coding protein_coding MGP_LPJ_T0066577.1 MGP_LPJ_G0028453.1 mouse_genomes_project 4 108252626 108304559 + MGP_LPJ_P0066577 Ndc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0066578.1 MGP_LPJ_G0028453.1 mouse_genomes_project 4 108252661 108306549 + MGP_LPJ_P0066578 Ndc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0066579.1 MGP_LPJ_G0028453.1 mouse_genomes_project 4 108252798 108301376 + MGP_LPJ_P0066579 Ndc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0066580.1 MGP_LPJ_G0028453.1 mouse_genomes_project 4 108268773 108274250 + Ndc1 protein_coding processed_transcript MGP_LPJ_T0066581.1 MGP_LPJ_G0028453.1 mouse_genomes_project 4 108269150 108279360 + Ndc1 protein_coding retained_intron MGP_LPJ_T0068704.1 MGP_LPJ_G0028924.1 mouse_genomes_project 4 142193129 142211024 - MGP_LPJ_P0068704 Pqlc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0068705.1 MGP_LPJ_G0028924.1 mouse_genomes_project 4 142197668 142211047 - MGP_LPJ_P0068705 Pqlc2 protein_coding protein_coding MGP_LPJ_T0068706.1 MGP_LPJ_G0028924.1 mouse_genomes_project 4 142197670 142211004 - MGP_LPJ_P0068706 Pqlc2 protein_coding protein_coding MGP_LPJ_T0068707.1 MGP_LPJ_G0028924.1 mouse_genomes_project 4 142197670 142211017 - MGP_LPJ_P0068707 Pqlc2 protein_coding protein_coding MGP_LPJ_T0068708.1 MGP_LPJ_G0028924.1 mouse_genomes_project 4 142200450 142210976 - MGP_LPJ_P0068708 Pqlc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0068773.1 MGP_LPJ_G0028942.1 mouse_genomes_project 4 143929105 143973773 + MGP_LPJ_P0068773 Padi2 protein_coding protein_coding MGP_LPJ_T0068774.1 MGP_LPJ_G0028942.1 mouse_genomes_project 4 143948290 143958837 + Padi2 protein_coding processed_transcript MGP_LPJ_T0068775.1 MGP_LPJ_G0028942.1 mouse_genomes_project 4 143967720 143970924 + Padi2 protein_coding processed_transcript MGP_LPJ_T0014539.1 MGP_LPJ_G0012630.1 mouse_genomes_project 4 65736617 65736955 + processed_pseudogene processed_pseudogene MGP_LPJ_T0067629.1 MGP_LPJ_G0028692.1 mouse_genomes_project 4 128294793 128314676 - MGP_LPJ_P0067629 Ago3 protein_coding protein_coding MGP_LPJ_T0067630.1 MGP_LPJ_G0028692.1 mouse_genomes_project 4 128296055 128397380 - MGP_LPJ_P0067630 Ago3 protein_coding protein_coding MGP_LPJ_T0067631.1 MGP_LPJ_G0028692.1 mouse_genomes_project 4 128309294 128315258 - MGP_LPJ_P0067631 Ago3 protein_coding protein_coding MGP_LPJ_T0067632.1 MGP_LPJ_G0028692.1 mouse_genomes_project 4 128341322 128371259 - Ago3 protein_coding processed_transcript MGP_LPJ_T0067633.1 MGP_LPJ_G0028692.1 mouse_genomes_project 4 128364915 128371300 - Ago3 protein_coding processed_transcript MGP_LPJ_T0067634.1 MGP_LPJ_G0028692.1 mouse_genomes_project 4 128374663 128397365 - Ago3 protein_coding processed_transcript MGP_LPJ_T0066842.1 MGP_LPJ_G0028498.1 mouse_genomes_project 4 113246194 113290260 + MGP_LPJ_P0066842 protein_coding protein_coding MGP_LPJ_T0066843.1 MGP_LPJ_G0028498.1 mouse_genomes_project 4 113246348 113275809 + protein_coding processed_transcript MGP_LPJ_T0066844.1 MGP_LPJ_G0028498.1 mouse_genomes_project 4 113251316 113275809 + MGP_LPJ_P0066844 protein_coding protein_coding MGP_LPJ_T0066708.1 MGP_LPJ_G0028479.1 mouse_genomes_project 4 109874410 109944706 + MGP_LPJ_P0066708 Rab3b protein_coding protein_coding MGP_LPJ_T0066709.1 MGP_LPJ_G0028479.1 mouse_genomes_project 4 109874547 109942570 + MGP_LPJ_P0066709 Rab3b protein_coding protein_coding MGP_LPJ_T0066710.1 MGP_LPJ_G0028479.1 mouse_genomes_project 4 109884338 109942573 + MGP_LPJ_P0066710 Rab3b protein_coding protein_coding MGP_LPJ_T0066711.1 MGP_LPJ_G0028479.1 mouse_genomes_project 4 109940484 109942290 + Rab3b protein_coding processed_transcript MGP_LPJ_T0068894.1 MGP_LPJ_G0028970.1 mouse_genomes_project 4 144923135 144927380 - Cela2a protein_coding retained_intron MGP_LPJ_T0068895.1 MGP_LPJ_G0028970.1 mouse_genomes_project 4 144923135 144934338 - MGP_LPJ_P0068895 Cela2a protein_coding protein_coding MGP_LPJ_T0068897.1 MGP_LPJ_G0028970.1 mouse_genomes_project 4 144933129 144934179 - Cela2a protein_coding retained_intron MGP_LPJ_T0066226.1 MGP_LPJ_G0028380.1 mouse_genomes_project 4 97149757 97210536 - MGP_LPJ_P0066226 Gm12695 protein_coding protein_coding MGP_LPJ_T0014460.1 MGP_LPJ_G0012551.1 mouse_genomes_project 4 34201193 34201999 + processed_pseudogene processed_pseudogene MGP_LPJ_T0018059.1 MGP_LPJ_G0015500.1 mouse_genomes_project 4 158849781 158859341 - Gm13110 processed_transcript processed_transcript MGP_LPJ_T0066635.1 MGP_LPJ_G0028462.1 mouse_genomes_project 4 108958126 109038520 - MGP_LPJ_P0066635 Scp2 protein_coding protein_coding MGP_LPJ_T0066636.1 MGP_LPJ_G0028462.1 mouse_genomes_project 4 108959439 108963608 - Scp2 protein_coding processed_transcript MGP_LPJ_T0066637.1 MGP_LPJ_G0028462.1 mouse_genomes_project 4 108959549 108987081 - Scp2 protein_coding processed_transcript MGP_LPJ_T0066638.1 MGP_LPJ_G0028462.1 mouse_genomes_project 4 108959721 108987137 - MGP_LPJ_P0066638 Scp2 protein_coding protein_coding MGP_LPJ_T0066639.1 MGP_LPJ_G0028462.1 mouse_genomes_project 4 108960009 109038464 - Scp2 protein_coding processed_transcript MGP_LPJ_T0066640.1 MGP_LPJ_G0028462.1 mouse_genomes_project 4 109003844 109038492 - MGP_LPJ_P0066640 Scp2 protein_coding protein_coding MGP_LPJ_T0066641.1 MGP_LPJ_G0028462.1 mouse_genomes_project 4 109008621 109038383 - Scp2 protein_coding processed_transcript MGP_LPJ_T0066642.1 MGP_LPJ_G0028462.1 mouse_genomes_project 4 109008930 109078730 - Scp2 protein_coding processed_transcript MGP_LPJ_T0066643.1 MGP_LPJ_G0028462.1 mouse_genomes_project 4 109019758 109078734 - MGP_LPJ_P0066643 Scp2 protein_coding protein_coding MGP_LPJ_T0014579.1 MGP_LPJ_G0012670.1 mouse_genomes_project 4 80324094 80324578 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011587.1 MGP_LPJ_G0009705.1 mouse_genomes_project 4 89665389 89665538 + Gm27580 misc_RNA misc_RNA MGP_LPJ_T0065913.1 MGP_LPJ_G0028305.1 mouse_genomes_project 4 75636016 76157146 - MGP_LPJ_P0065913 Ptprd protein_coding protein_coding MGP_LPJ_T0065914.1 MGP_LPJ_G0028305.1 mouse_genomes_project 4 75636017 75828168 - MGP_LPJ_P0065914 Ptprd protein_coding protein_coding MGP_LPJ_T0065915.1 MGP_LPJ_G0028305.1 mouse_genomes_project 4 75639720 76307017 - MGP_LPJ_P0065915 Ptprd protein_coding protein_coding MGP_LPJ_T0065916.1 MGP_LPJ_G0028305.1 mouse_genomes_project 4 75639872 76024769 - MGP_LPJ_P0065916 Ptprd protein_coding protein_coding MGP_LPJ_T0065917.1 MGP_LPJ_G0028305.1 mouse_genomes_project 4 75639872 76024748 - MGP_LPJ_P0065917 Ptprd protein_coding protein_coding MGP_LPJ_T0065918.1 MGP_LPJ_G0028305.1 mouse_genomes_project 4 75639872 76024769 - MGP_LPJ_P0065918 Ptprd protein_coding protein_coding MGP_LPJ_T0065919.1 MGP_LPJ_G0028305.1 mouse_genomes_project 4 75639872 76024769 - MGP_LPJ_P0065919 Ptprd protein_coding protein_coding MGP_LPJ_T0065920.1 MGP_LPJ_G0028305.1 mouse_genomes_project 4 75639872 76043010 - MGP_LPJ_P0065920 Ptprd protein_coding protein_coding MGP_LPJ_T0065921.1 MGP_LPJ_G0028305.1 mouse_genomes_project 4 75639872 76024769 - MGP_LPJ_P0065921 Ptprd protein_coding protein_coding MGP_LPJ_T0065922.1 MGP_LPJ_G0028305.1 mouse_genomes_project 4 75780758 75800492 - Ptprd protein_coding retained_intron MGP_LPJ_T0065923.1 MGP_LPJ_G0028305.1 mouse_genomes_project 4 75782885 75785031 - MGP_LPJ_P0065923 Ptprd protein_coding protein_coding MGP_LPJ_T0065924.1 MGP_LPJ_G0028305.1 mouse_genomes_project 4 75798470 75806354 - MGP_LPJ_P0065924 Ptprd protein_coding nonsense_mediated_decay MGP_LPJ_T0065925.1 MGP_LPJ_G0028305.1 mouse_genomes_project 4 75827446 75828427 - MGP_LPJ_P0065925 Ptprd protein_coding protein_coding MGP_LPJ_T0065926.1 MGP_LPJ_G0028305.1 mouse_genomes_project 4 75833692 78022936 - Ptprd protein_coding processed_transcript MGP_LPJ_T0065927.1 MGP_LPJ_G0028305.1 mouse_genomes_project 4 75834668 76024793 - Ptprd protein_coding processed_transcript MGP_LPJ_T0065928.1 MGP_LPJ_G0028305.1 mouse_genomes_project 4 76304024 78022908 - Ptprd protein_coding processed_transcript MGP_LPJ_T0065929.1 MGP_LPJ_G0028305.1 mouse_genomes_project 4 76306257 78022780 - Ptprd protein_coding processed_transcript MGP_LPJ_T0065930.1 MGP_LPJ_G0028305.1 mouse_genomes_project 4 76951575 78022780 - Ptprd protein_coding retained_intron MGP_LPJ_T0065931.1 MGP_LPJ_G0028305.1 mouse_genomes_project 4 77122911 78023002 - Ptprd protein_coding processed_transcript MGP_LPJ_T0065932.1 MGP_LPJ_G0028305.1 mouse_genomes_project 4 77712634 78022893 - Ptprd protein_coding processed_transcript MGP_LPJ_T0065933.1 MGP_LPJ_G0028305.1 mouse_genomes_project 4 77720379 78022884 - Ptprd protein_coding retained_intron MGP_LPJ_T0064886.1 MGP_LPJ_G0028062.1 mouse_genomes_project 4 38058196 38116119 + MGP_LPJ_P0064886 Aco1 protein_coding protein_coding MGP_LPJ_T0064887.1 MGP_LPJ_G0028062.1 mouse_genomes_project 4 38078809 38084439 + Aco1 protein_coding processed_transcript MGP_LPJ_T0064888.1 MGP_LPJ_G0028062.1 mouse_genomes_project 4 38081955 38091698 + Aco1 protein_coding processed_transcript MGP_LPJ_T0064889.1 MGP_LPJ_G0028062.1 mouse_genomes_project 4 38106362 38114185 + Aco1 protein_coding processed_transcript MGP_LPJ_T0010621.1 MGP_LPJ_G0008739.1 mouse_genomes_project 4 81971090 81971200 - Gm22402 miRNA miRNA MGP_LPJ_T0004544.1 MGP_LPJ_G0003950.1 mouse_genomes_project 4 120417483 120418193 - Gm12867 antisense antisense MGP_LPJ_T0065750.1 MGP_LPJ_G0028259.1 mouse_genomes_project 4 61425249 61446351 - MGP_LPJ_P0065750 Zfp37 protein_coding protein_coding MGP_LPJ_T0065751.1 MGP_LPJ_G0028259.1 mouse_genomes_project 4 61426856 61446266 - MGP_LPJ_P0065751 Zfp37 protein_coding unknown_likely_coding MGP_LPJ_T0065752.1 MGP_LPJ_G0028259.1 mouse_genomes_project 4 61426856 61446266 - MGP_LPJ_P0065752 Zfp37 protein_coding unknown_likely_coding MGP_LPJ_T0065753.1 MGP_LPJ_G0028259.1 mouse_genomes_project 4 61428247 61446107 - Zfp37 protein_coding processed_transcript MGP_LPJ_T0065754.1 MGP_LPJ_G0028259.1 mouse_genomes_project 4 61428298 61445794 - Zfp37 protein_coding processed_transcript MGP_LPJ_T0067812.1 MGP_LPJ_G0028733.1 mouse_genomes_project 4 131547150 131571397 - MGP_LPJ_P0067812 Zbtb8a protein_coding protein_coding MGP_LPJ_T0066462.1 MGP_LPJ_G0028434.1 mouse_genomes_project 4 107384750 107418150 + MGP_LPJ_P0066462 Dhcr24 protein_coding protein_coding MGP_LPJ_T0011836.1 MGP_LPJ_G0009940.1 mouse_genomes_project 4 141704019 141707346 + MGP_LPJ_P0011836 Pla2g2a polymorphic_pseudogene protein_coding MGP_LPJ_T0011837.1 MGP_LPJ_G0009940.1 mouse_genomes_project 4 141704022 141707349 + MGP_LPJ_P0011837 Pla2g2a polymorphic_pseudogene polymorphic_pseudogene MGP_LPJ_T0011838.1 MGP_LPJ_G0009940.1 mouse_genomes_project 4 141704038 141706032 + Pla2g2a polymorphic_pseudogene processed_transcript MGP_LPJ_T0011839.1 MGP_LPJ_G0009940.1 mouse_genomes_project 4 141705421 141707349 + Pla2g2a polymorphic_pseudogene retained_intron MGP_LPJ_T0102156.1 MGP_LPJ_G0040193.1 mouse_genomes_project 4 118286993 118290374 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0068560.1 MGP_LPJ_G0028894.1 mouse_genomes_project 4 140310481 140312716 - MGP_LPJ_P0068560 Ldlrad2 protein_coding protein_coding MGP_LPJ_T0067217.1 MGP_LPJ_G0028579.1 mouse_genomes_project 4 119645428 119651860 + MGP_LPJ_P0067217 Med8 protein_coding protein_coding MGP_LPJ_T0067218.1 MGP_LPJ_G0028579.1 mouse_genomes_project 4 119645428 119651194 + MGP_LPJ_P0067218 Med8 protein_coding protein_coding MGP_LPJ_T0067219.1 MGP_LPJ_G0028579.1 mouse_genomes_project 4 119645445 119651195 + MGP_LPJ_P0067219 Med8 protein_coding protein_coding MGP_LPJ_T0067220.1 MGP_LPJ_G0028579.1 mouse_genomes_project 4 119645446 119651192 + MGP_LPJ_P0067220 Med8 protein_coding protein_coding MGP_LPJ_T0067221.1 MGP_LPJ_G0028579.1 mouse_genomes_project 4 119645447 119649918 + Med8 protein_coding processed_transcript MGP_LPJ_T0067222.1 MGP_LPJ_G0028579.1 mouse_genomes_project 4 119646439 119647884 + Med8 protein_coding processed_transcript MGP_LPJ_T0067223.1 MGP_LPJ_G0028579.1 mouse_genomes_project 4 119647524 119648605 + Med8 protein_coding processed_transcript MGP_LPJ_T0067224.1 MGP_LPJ_G0028579.1 mouse_genomes_project 4 119647715 119650128 + Med8 protein_coding processed_transcript MGP_LPJ_T0007968.1 MGP_LPJ_G0006509.1 mouse_genomes_project 4 129521015 129523008 + 4930471C06Rik lincRNA lincRNA MGP_LPJ_T0007969.1 MGP_LPJ_G0006509.1 mouse_genomes_project 4 129521101 129523008 + 4930471C06Rik lincRNA lincRNA MGP_LPJ_T0010678.1 MGP_LPJ_G0008796.1 mouse_genomes_project 4 160363603 160363693 - Mir200a miRNA miRNA MGP_LPJ_T0066442.1 MGP_LPJ_G0028424.1 mouse_genomes_project 4 105487602 105527656 + MGP_LPJ_P0066442 C8b protein_coding protein_coding MGP_LPJ_T0066443.1 MGP_LPJ_G0028424.1 mouse_genomes_project 4 105487675 105527667 + MGP_LPJ_P0066443 C8b protein_coding protein_coding MGP_LPJ_T0066444.1 MGP_LPJ_G0028424.1 mouse_genomes_project 4 105521411 105528036 + C8b protein_coding processed_transcript MGP_LPJ_T0014435.1 MGP_LPJ_G0012526.1 mouse_genomes_project 4 26567933 26568112 + processed_pseudogene processed_pseudogene MGP_LPJ_T0066514.1 MGP_LPJ_G0028443.1 mouse_genomes_project 4 107922999 107933894 - MGP_LPJ_P0066514 Mrpl37 protein_coding protein_coding MGP_LPJ_T0066515.1 MGP_LPJ_G0028443.1 mouse_genomes_project 4 107923010 107927076 - Mrpl37 protein_coding retained_intron MGP_LPJ_T0066516.1 MGP_LPJ_G0028443.1 mouse_genomes_project 4 107923093 107931796 - Mrpl37 protein_coding processed_transcript MGP_LPJ_T0066517.1 MGP_LPJ_G0028443.1 mouse_genomes_project 4 107923100 107933846 - Mrpl37 protein_coding processed_transcript MGP_LPJ_T0066518.1 MGP_LPJ_G0028443.1 mouse_genomes_project 4 107931421 107932383 - Mrpl37 protein_coding retained_intron MGP_LPJ_T0067426.1 MGP_LPJ_G0028638.1 mouse_genomes_project 4 124337966 124359000 + MGP_LPJ_P0067426 9530002B09Rik protein_coding protein_coding MGP_LPJ_T0014613.1 MGP_LPJ_G0012704.1 mouse_genomes_project 4 94147859 94148117 + processed_pseudogene processed_pseudogene MGP_LPJ_T0067354.1 MGP_LPJ_G0028617.1 mouse_genomes_project 4 121072615 121221735 + Hivep3 protein_coding processed_transcript MGP_LPJ_T0067355.1 MGP_LPJ_G0028617.1 mouse_genomes_project 4 121072615 121159499 + Hivep3 protein_coding processed_transcript MGP_LPJ_T0067356.1 MGP_LPJ_G0028617.1 mouse_genomes_project 4 121072627 121075611 + MGP_LPJ_P0067356 Hivep3 protein_coding protein_coding MGP_LPJ_T0067357.1 MGP_LPJ_G0028617.1 mouse_genomes_project 4 121072672 121220630 + Hivep3 protein_coding processed_transcript MGP_LPJ_T0067358.1 MGP_LPJ_G0028617.1 mouse_genomes_project 4 121100015 121221099 + Hivep3 protein_coding processed_transcript MGP_LPJ_T0067359.1 MGP_LPJ_G0028617.1 mouse_genomes_project 4 121159081 121351875 + Hivep3 protein_coding processed_transcript MGP_LPJ_T0067360.1 MGP_LPJ_G0028617.1 mouse_genomes_project 4 121159105 121221735 + Hivep3 protein_coding processed_transcript MGP_LPJ_T0067361.1 MGP_LPJ_G0028617.1 mouse_genomes_project 4 121159245 121504391 + MGP_LPJ_P0067361 Hivep3 protein_coding protein_coding MGP_LPJ_T0067362.1 MGP_LPJ_G0028617.1 mouse_genomes_project 4 121460285 121499425 + MGP_LPJ_P0067362 Hivep3 protein_coding protein_coding MGP_LPJ_T0100794.1 MGP_LPJ_G0039057.1 mouse_genomes_project 4 120250015 120250140 + Gm24352 snoRNA snoRNA MGP_LPJ_T0068690.1 MGP_LPJ_G0028922.1 mouse_genomes_project 4 141992192 142021497 - MGP_LPJ_P0068690 Minos1 protein_coding protein_coding MGP_LPJ_T0068691.1 MGP_LPJ_G0028922.1 mouse_genomes_project 4 141994169 141996338 - Minos1 protein_coding processed_transcript MGP_LPJ_T0068692.1 MGP_LPJ_G0028922.1 mouse_genomes_project 4 141994201 142001622 - Minos1 protein_coding processed_transcript MGP_LPJ_T0068693.1 MGP_LPJ_G0028922.1 mouse_genomes_project 4 141994280 142021378 - Minos1 protein_coding processed_transcript MGP_LPJ_T0100764.1 MGP_LPJ_G0039027.1 mouse_genomes_project 4 55767524 55767656 - Gm25053 snoRNA snoRNA MGP_LPJ_T0065058.1 MGP_LPJ_G0028105.1 mouse_genomes_project 4 41061703 41083678 + Phf24 protein_coding processed_transcript MGP_LPJ_T0065059.1 MGP_LPJ_G0028105.1 mouse_genomes_project 4 41061724 41079661 + MGP_LPJ_P0065059 Phf24 protein_coding protein_coding MGP_LPJ_T0065060.1 MGP_LPJ_G0028105.1 mouse_genomes_project 4 41061737 41090531 + MGP_LPJ_P0065060 Phf24 protein_coding protein_coding MGP_LPJ_T0065061.1 MGP_LPJ_G0028105.1 mouse_genomes_project 4 41062294 41090531 + MGP_LPJ_P0065061 Phf24 protein_coding protein_coding MGP_LPJ_T0065062.1 MGP_LPJ_G0028105.1 mouse_genomes_project 4 41062313 41090531 + MGP_LPJ_P0065062 Phf24 protein_coding protein_coding MGP_LPJ_T0065063.1 MGP_LPJ_G0028105.1 mouse_genomes_project 4 41062377 41086136 + MGP_LPJ_P0065063 Phf24 protein_coding nonsense_mediated_decay MGP_LPJ_T0065064.1 MGP_LPJ_G0028105.1 mouse_genomes_project 4 41067267 41079627 + MGP_LPJ_P0065064 Phf24 protein_coding protein_coding MGP_LPJ_T0065065.1 MGP_LPJ_G0028105.1 mouse_genomes_project 4 41079748 41085292 + MGP_LPJ_P0065065 Phf24 protein_coding protein_coding MGP_LPJ_T0065066.1 MGP_LPJ_G0028105.1 mouse_genomes_project 4 41084031 41085612 + MGP_LPJ_P0065066 Phf24 protein_coding protein_coding MGP_LPJ_T0066696.1 MGP_LPJ_G0028473.1 mouse_genomes_project 4 109630922 109771066 - MGP_LPJ_P0066696 protein_coding protein_coding MGP_LPJ_T0066697.1 MGP_LPJ_G0028473.1 mouse_genomes_project 4 109630923 109770781 - MGP_LPJ_P0066697 protein_coding protein_coding MGP_LPJ_T0066698.1 MGP_LPJ_G0028473.1 mouse_genomes_project 4 109632713 109714005 - MGP_LPJ_P0066698 protein_coding protein_coding MGP_LPJ_T0099535.1 MGP_LPJ_G0037798.1 mouse_genomes_project 4 138752464 138752567 + Gm26001 snRNA snRNA MGP_LPJ_T0069058.1 MGP_LPJ_G0029028.1 mouse_genomes_project 4 152183513 152188998 - MGP_LPJ_P0069058 Angptl7 protein_coding protein_coding MGP_LPJ_T0014366.1 MGP_LPJ_G0012457.1 mouse_genomes_project 4 7869207 7869768 + processed_pseudogene processed_pseudogene MGP_LPJ_T0068912.1 MGP_LPJ_G0028974.1 mouse_genomes_project 4 145157067 145217249 - MGP_LPJ_P0068912 Tmem51 protein_coding protein_coding MGP_LPJ_T0099533.1 MGP_LPJ_G0037796.1 mouse_genomes_project 4 136281643 136281743 - Gm22523 snRNA snRNA MGP_LPJ_T0098607.1 MGP_LPJ_G0036881.1 mouse_genomes_project 4 156225803 156226200 + Gm13096 sense_intronic sense_intronic MGP_LPJ_T0011588.1 MGP_LPJ_G0009706.1 mouse_genomes_project 4 94808719 94808980 - Gm26410 misc_RNA misc_RNA MGP_LPJ_T0066152.1 MGP_LPJ_G0028360.1 mouse_genomes_project 4 93657926 93659301 - MGP_LPJ_P0066152 Tusc1 protein_coding protein_coding MGP_LPJ_T0066659.1 MGP_LPJ_G0028465.1 mouse_genomes_project 4 109175274 109247579 - MGP_LPJ_P0066659 Zyg11b protein_coding protein_coding MGP_LPJ_T0068676.1 MGP_LPJ_G0028916.1 mouse_genomes_project 4 141753763 141758639 + MGP_LPJ_P0068676 Pla2g2e protein_coding protein_coding MGP_LPJ_T0068677.1 MGP_LPJ_G0028916.1 mouse_genomes_project 4 141753792 141758344 + MGP_LPJ_P0068677 Pla2g2e protein_coding protein_coding MGP_LPJ_T0068678.1 MGP_LPJ_G0028916.1 mouse_genomes_project 4 141755181 141758639 + MGP_LPJ_P0068678 Pla2g2e protein_coding protein_coding MGP_LPJ_T0011575.1 MGP_LPJ_G0009693.1 mouse_genomes_project 4 32359530 32359837 + Gm22849 misc_RNA misc_RNA MGP_LPJ_T0007987.1 MGP_LPJ_G0006522.1 mouse_genomes_project 4 132974866 132976653 + Gm12972 lincRNA lincRNA MGP_LPJ_T0066133.1 MGP_LPJ_G0028356.1 mouse_genomes_project 4 89903886 89916326 + Dmrta1 protein_coding processed_transcript MGP_LPJ_T0066134.1 MGP_LPJ_G0028356.1 mouse_genomes_project 4 89912608 89919172 + MGP_LPJ_P0066134 Dmrta1 protein_coding protein_coding MGP_LPJ_T0010587.1 MGP_LPJ_G0008705.1 mouse_genomes_project 4 53685 53787 + Mir3471-2 miRNA miRNA MGP_LPJ_T0067188.1 MGP_LPJ_G0028574.1 mouse_genomes_project 4 119120333 119123935 - MGP_LPJ_P0067188 Artn protein_coding protein_coding MGP_LPJ_T0067189.1 MGP_LPJ_G0028574.1 mouse_genomes_project 4 119120334 119123669 - MGP_LPJ_P0067189 Artn protein_coding protein_coding MGP_LPJ_T0067190.1 MGP_LPJ_G0028574.1 mouse_genomes_project 4 119122213 119123649 - Artn protein_coding processed_transcript MGP_LPJ_T0067191.1 MGP_LPJ_G0028574.1 mouse_genomes_project 4 119122315 119123585 - Artn protein_coding processed_transcript MGP_LPJ_T0065749.1 MGP_LPJ_G0028258.1 mouse_genomes_project 4 61282275 61403574 - MGP_LPJ_P0065749 protein_coding protein_coding MGP_LPJ_T0068945.1 MGP_LPJ_G0028991.1 mouse_genomes_project 4 147585101 147591360 - MGP_LPJ_P0068945 protein_coding protein_coding MGP_LPJ_T0007881.1 MGP_LPJ_G0006443.1 mouse_genomes_project 4 62910848 62920937 - lincRNA lincRNA MGP_LPJ_T0067095.1 MGP_LPJ_G0028558.1 mouse_genomes_project 4 118266428 118271646 - MGP_LPJ_P0067095 Plk3 protein_coding protein_coding MGP_LPJ_T0067096.1 MGP_LPJ_G0028558.1 mouse_genomes_project 4 118266436 118271726 - Plk3 protein_coding processed_transcript MGP_LPJ_T0065239.1 MGP_LPJ_G0028129.1 mouse_genomes_project 4 41816602 41835920 + MGP_LPJ_P0065239 Npr2 protein_coding protein_coding MGP_LPJ_T0065240.1 MGP_LPJ_G0028129.1 mouse_genomes_project 4 41816852 41835920 + MGP_LPJ_P0065240 Npr2 protein_coding protein_coding MGP_LPJ_T0065241.1 MGP_LPJ_G0028129.1 mouse_genomes_project 4 41825791 41835920 + Npr2 protein_coding processed_transcript MGP_LPJ_T0065242.1 MGP_LPJ_G0028129.1 mouse_genomes_project 4 41825930 41827774 + Npr2 protein_coding processed_transcript MGP_LPJ_T0065243.1 MGP_LPJ_G0028129.1 mouse_genomes_project 4 41825937 41829055 + MGP_LPJ_P0065243 Npr2 protein_coding protein_coding MGP_LPJ_T0065244.1 MGP_LPJ_G0028129.1 mouse_genomes_project 4 41825959 41835920 + MGP_LPJ_P0065244 Npr2 protein_coding protein_coding MGP_LPJ_T0065245.1 MGP_LPJ_G0028129.1 mouse_genomes_project 4 41828811 41832854 + Npr2 protein_coding processed_transcript MGP_LPJ_T0065246.1 MGP_LPJ_G0028129.1 mouse_genomes_project 4 41831235 41834985 + Npr2 protein_coding processed_transcript MGP_LPJ_T0065247.1 MGP_LPJ_G0028129.1 mouse_genomes_project 4 41831872 41833076 + Npr2 protein_coding processed_transcript MGP_LPJ_T0065248.1 MGP_LPJ_G0028129.1 mouse_genomes_project 4 41832680 41834906 + Npr2 protein_coding processed_transcript MGP_LPJ_T0065784.1 MGP_LPJ_G0028268.1 mouse_genomes_project 4 61760473 61763742 - MGP_LPJ_P0065784 Hdhd3 protein_coding protein_coding MGP_LPJ_T0065785.1 MGP_LPJ_G0028268.1 mouse_genomes_project 4 61761408 61764933 - Hdhd3 protein_coding processed_transcript MGP_LPJ_T0007872.1 MGP_LPJ_G0006436.1 mouse_genomes_project 4 56192587 56199818 + Gm12536 lincRNA lincRNA MGP_LPJ_T0068325.1 MGP_LPJ_G0028834.1 mouse_genomes_project 4 136784105 136794696 + MGP_LPJ_P0068325 Slc30a2 protein_coding protein_coding MGP_LPJ_T0068326.1 MGP_LPJ_G0028834.1 mouse_genomes_project 4 136784211 136794547 + MGP_LPJ_P0068326 Slc30a2 protein_coding protein_coding MGP_LPJ_T0004613.1 MGP_LPJ_G0004004.1 mouse_genomes_project 4 152699160 152706816 + Gm17029 antisense antisense MGP_LPJ_T0004614.1 MGP_LPJ_G0004004.1 mouse_genomes_project 4 152699189 152725556 + Gm17029 antisense antisense MGP_LPJ_T0004615.1 MGP_LPJ_G0004004.1 mouse_genomes_project 4 152699223 152705852 + Gm17029 antisense antisense MGP_LPJ_T0018030.1 MGP_LPJ_G0015485.1 mouse_genomes_project 4 117699700 117707634 - C530005A16Rik processed_transcript processed_transcript MGP_LPJ_T0100735.1 MGP_LPJ_G0038998.1 mouse_genomes_project 4 4438711 4438843 + Gm23860 snoRNA snoRNA MGP_LPJ_T0069114.1 MGP_LPJ_G0029039.1 mouse_genomes_project 4 152905689 152922393 - MGP_LPJ_P0069114 Pgd protein_coding protein_coding MGP_LPJ_T0069115.1 MGP_LPJ_G0029039.1 mouse_genomes_project 4 152910878 152915686 - Pgd protein_coding retained_intron MGP_LPJ_T0069116.1 MGP_LPJ_G0029039.1 mouse_genomes_project 4 152915613 152922457 - Pgd protein_coding retained_intron MGP_LPJ_T0069117.1 MGP_LPJ_G0029039.1 mouse_genomes_project 4 152915979 152917341 - Pgd protein_coding retained_intron MGP_LPJ_T0069118.1 MGP_LPJ_G0029039.1 mouse_genomes_project 4 152917070 152922346 - Pgd protein_coding retained_intron MGP_LPJ_T0065618.1 MGP_LPJ_G0028224.1 mouse_genomes_project 4 55604731 55606244 + MGP_LPJ_P0065618 Actl7a protein_coding protein_coding MGP_LPJ_T0065381.1 MGP_LPJ_G0028157.1 mouse_genomes_project 4 43595003 43599018 - MGP_LPJ_P0065381 Exosc3 protein_coding protein_coding MGP_LPJ_T0065382.1 MGP_LPJ_G0028157.1 mouse_genomes_project 4 43595184 43598725 - Exosc3 protein_coding processed_transcript MGP_LPJ_T0065383.1 MGP_LPJ_G0028157.1 mouse_genomes_project 4 43595344 43621121 - MGP_LPJ_P0065383 Exosc3 protein_coding protein_coding MGP_LPJ_T0065384.1 MGP_LPJ_G0028157.1 mouse_genomes_project 4 43595877 43598993 - Exosc3 protein_coding processed_transcript MGP_LPJ_T0004590.1 MGP_LPJ_G0003987.1 mouse_genomes_project 4 143968868 143979078 - Gm13031 antisense antisense MGP_LPJ_T0066167.1 MGP_LPJ_G0028366.1 mouse_genomes_project 4 95127007 95255371 + MGP_LPJ_P0066167 Tek protein_coding protein_coding MGP_LPJ_T0066168.1 MGP_LPJ_G0028366.1 mouse_genomes_project 4 95127018 95255334 + MGP_LPJ_P0066168 Tek protein_coding protein_coding MGP_LPJ_T0066169.1 MGP_LPJ_G0028366.1 mouse_genomes_project 4 95127236 95255077 + MGP_LPJ_P0066169 Tek protein_coding protein_coding MGP_LPJ_T0066170.1 MGP_LPJ_G0028366.1 mouse_genomes_project 4 95127359 95254393 + MGP_LPJ_P0066170 Tek protein_coding unknown_likely_coding MGP_LPJ_T0066171.1 MGP_LPJ_G0028366.1 mouse_genomes_project 4 95191149 95204621 + Tek protein_coding processed_transcript MGP_LPJ_T0014465.1 MGP_LPJ_G0012556.1 mouse_genomes_project 4 36571693 36572619 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014344.1 MGP_LPJ_G0012435.1 mouse_genomes_project 4 338803 339563 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010651.1 MGP_LPJ_G0008769.1 mouse_genomes_project 4 135737568 135737657 + Mir5122 miRNA miRNA MGP_LPJ_T0064994.1 MGP_LPJ_G0028088.1 mouse_genomes_project 4 39665107 39667288 - MGP_LPJ_P0064994 Enho protein_coding protein_coding MGP_LPJ_T0067789.1 MGP_LPJ_G0028728.1 mouse_genomes_project 4 131364749 131395385 + MGP_LPJ_P0067789 Yars protein_coding protein_coding MGP_LPJ_T0067790.1 MGP_LPJ_G0028728.1 mouse_genomes_project 4 131364894 131372696 + Yars protein_coding retained_intron MGP_LPJ_T0067791.1 MGP_LPJ_G0028728.1 mouse_genomes_project 4 131372369 131386362 + MGP_LPJ_P0067791 Yars protein_coding nonsense_mediated_decay MGP_LPJ_T0067792.1 MGP_LPJ_G0028728.1 mouse_genomes_project 4 131372488 131384432 + Yars protein_coding processed_transcript MGP_LPJ_T0067793.1 MGP_LPJ_G0028728.1 mouse_genomes_project 4 131385354 131386636 + Yars protein_coding retained_intron MGP_LPJ_T0067794.1 MGP_LPJ_G0028728.1 mouse_genomes_project 4 131388022 131391504 + Yars protein_coding retained_intron MGP_LPJ_T0067795.1 MGP_LPJ_G0028728.1 mouse_genomes_project 4 131388474 131394441 + Yars protein_coding processed_transcript MGP_LPJ_T0067796.1 MGP_LPJ_G0028728.1 mouse_genomes_project 4 131389536 131390705 + Yars protein_coding retained_intron MGP_LPJ_T0014413.1 MGP_LPJ_G0012504.1 mouse_genomes_project 4 21461605 21462807 + processed_pseudogene processed_pseudogene MGP_LPJ_T0068455.1 MGP_LPJ_G0028864.1 mouse_genomes_project 4 138540066 138555965 + MGP_LPJ_P0068455 Hmgcl protein_coding protein_coding MGP_LPJ_T0068456.1 MGP_LPJ_G0028864.1 mouse_genomes_project 4 138540083 138554254 + Hmgcl protein_coding processed_transcript MGP_LPJ_T0068457.1 MGP_LPJ_G0028864.1 mouse_genomes_project 4 138542196 138552102 + Hmgcl protein_coding processed_transcript MGP_LPJ_T0068458.1 MGP_LPJ_G0028864.1 mouse_genomes_project 4 138553079 138555965 + Hmgcl protein_coding processed_transcript MGP_LPJ_T0068459.1 MGP_LPJ_G0028864.1 mouse_genomes_project 4 138553681 138555562 + Hmgcl protein_coding processed_transcript MGP_LPJ_T0014445.1 MGP_LPJ_G0012536.1 mouse_genomes_project 4 30212833 30212993 - processed_pseudogene processed_pseudogene MGP_LPJ_T0066790.1 MGP_LPJ_G0028491.1 mouse_genomes_project 4 111477875 112050409 + MGP_LPJ_P0066790 Agbl4 protein_coding protein_coding MGP_LPJ_T0066791.1 MGP_LPJ_G0028491.1 mouse_genomes_project 4 111477912 112793811 + MGP_LPJ_P0066791 Agbl4 protein_coding protein_coding MGP_LPJ_T0066792.1 MGP_LPJ_G0028491.1 mouse_genomes_project 4 111477912 111738730 + MGP_LPJ_P0066792 Agbl4 protein_coding protein_coding MGP_LPJ_T0066793.1 MGP_LPJ_G0028491.1 mouse_genomes_project 4 111477912 112693587 + MGP_LPJ_P0066793 Agbl4 protein_coding protein_coding MGP_LPJ_T0066794.1 MGP_LPJ_G0028491.1 mouse_genomes_project 4 111478005 112787095 + MGP_LPJ_P0066794 Agbl4 protein_coding protein_coding MGP_LPJ_T0066795.1 MGP_LPJ_G0028491.1 mouse_genomes_project 4 111478005 112787095 + MGP_LPJ_P0066795 Agbl4 protein_coding protein_coding MGP_LPJ_T0066796.1 MGP_LPJ_G0028491.1 mouse_genomes_project 4 112224336 112380549 + Agbl4 protein_coding processed_transcript MGP_LPJ_T0066797.1 MGP_LPJ_G0028491.1 mouse_genomes_project 4 112224406 112748414 + MGP_LPJ_P0066797 Agbl4 protein_coding protein_coding MGP_LPJ_T0066804.1 MGP_LPJ_G0028491.1 mouse_genomes_project 4 112693271 112786154 + Agbl4 protein_coding processed_transcript MGP_LPJ_T0066805.1 MGP_LPJ_G0028491.1 mouse_genomes_project 4 112693301 112787092 + Agbl4 protein_coding processed_transcript MGP_LPJ_T0007954.1 MGP_LPJ_G0006503.1 mouse_genomes_project 4 126119787 126128412 - 1700021L23Rik lincRNA lincRNA MGP_LPJ_T0014685.1 MGP_LPJ_G0012776.1 mouse_genomes_project 4 118902160 118904851 - processed_pseudogene processed_pseudogene MGP_LPJ_T0064459.1 MGP_LPJ_G0027961.1 mouse_genomes_project 4 2927329 2961314 + MGP_LPJ_P0064459 Sdcbp protein_coding protein_coding MGP_LPJ_T0064460.1 MGP_LPJ_G0027961.1 mouse_genomes_project 4 2927356 2960685 + MGP_LPJ_P0064460 Sdcbp protein_coding protein_coding MGP_LPJ_T0064461.1 MGP_LPJ_G0027961.1 mouse_genomes_project 4 2927387 2935805 + Sdcbp protein_coding processed_transcript MGP_LPJ_T0064462.1 MGP_LPJ_G0027961.1 mouse_genomes_project 4 2927388 2958141 + MGP_LPJ_P0064462 Sdcbp protein_coding protein_coding MGP_LPJ_T0064463.1 MGP_LPJ_G0027961.1 mouse_genomes_project 4 2927391 2946836 + Sdcbp protein_coding processed_transcript MGP_LPJ_T0064464.1 MGP_LPJ_G0027961.1 mouse_genomes_project 4 2927392 2947671 + MGP_LPJ_P0064464 Sdcbp protein_coding protein_coding MGP_LPJ_T0064465.1 MGP_LPJ_G0027961.1 mouse_genomes_project 4 2927392 2973443 + MGP_LPJ_P0064465 Sdcbp protein_coding protein_coding MGP_LPJ_T0064466.1 MGP_LPJ_G0027961.1 mouse_genomes_project 4 2938516 2958025 + MGP_LPJ_P0064466 Sdcbp protein_coding protein_coding MGP_LPJ_T0099523.1 MGP_LPJ_G0037786.1 mouse_genomes_project 4 128150618 128150715 - Gm25323 snRNA snRNA MGP_LPJ_T0067934.1 MGP_LPJ_G0028754.1 mouse_genomes_project 4 132351904 132409115 + MGP_LPJ_P0067934 Col16a1 protein_coding protein_coding MGP_LPJ_T0067935.1 MGP_LPJ_G0028754.1 mouse_genomes_project 4 132351939 132353779 + MGP_LPJ_P0067935 Col16a1 protein_coding protein_coding MGP_LPJ_T0067936.1 MGP_LPJ_G0028754.1 mouse_genomes_project 4 132351949 132401089 + Col16a1 protein_coding processed_transcript MGP_LPJ_T0067937.1 MGP_LPJ_G0028754.1 mouse_genomes_project 4 132351973 132385928 + Col16a1 protein_coding processed_transcript MGP_LPJ_T0067938.1 MGP_LPJ_G0028754.1 mouse_genomes_project 4 132352009 132355906 + MGP_LPJ_P0067938 Col16a1 protein_coding protein_coding MGP_LPJ_T0067939.1 MGP_LPJ_G0028754.1 mouse_genomes_project 4 132352026 132409121 + MGP_LPJ_P0067939 Col16a1 protein_coding nonsense_mediated_decay MGP_LPJ_T0067940.1 MGP_LPJ_G0028754.1 mouse_genomes_project 4 132359043 132362607 + MGP_LPJ_P0067940 Col16a1 protein_coding protein_coding MGP_LPJ_T0067941.1 MGP_LPJ_G0028754.1 mouse_genomes_project 4 132359088 132360053 + Col16a1 protein_coding retained_intron MGP_LPJ_T0067942.1 MGP_LPJ_G0028754.1 mouse_genomes_project 4 132360015 132409115 + MGP_LPJ_P0067942 Col16a1 protein_coding protein_coding MGP_LPJ_T0067943.1 MGP_LPJ_G0028754.1 mouse_genomes_project 4 132373769 132387026 + Col16a1 protein_coding processed_transcript MGP_LPJ_T0067944.1 MGP_LPJ_G0028754.1 mouse_genomes_project 4 132382624 132385735 + Col16a1 protein_coding processed_transcript MGP_LPJ_T0067945.1 MGP_LPJ_G0028754.1 mouse_genomes_project 4 132384549 132386147 + Col16a1 protein_coding processed_transcript MGP_LPJ_T0067946.1 MGP_LPJ_G0028754.1 mouse_genomes_project 4 132407443 132409114 + Col16a1 protein_coding processed_transcript MGP_LPJ_T0068554.1 MGP_LPJ_G0028891.1 mouse_genomes_project 4 140101048 140140181 - MGP_LPJ_P0068554 protein_coding protein_coding MGP_LPJ_T0068555.1 MGP_LPJ_G0028891.1 mouse_genomes_project 4 140101057 140110987 - protein_coding processed_transcript MGP_LPJ_T0066666.1 MGP_LPJ_G0028468.1 mouse_genomes_project 4 109363699 109370284 - MGP_LPJ_P0066666 Gpx7 protein_coding protein_coding MGP_LPJ_T0066667.1 MGP_LPJ_G0028468.1 mouse_genomes_project 4 109364158 109370047 - MGP_LPJ_P0066667 Gpx7 protein_coding protein_coding MGP_LPJ_T0065884.1 MGP_LPJ_G0028296.1 mouse_genomes_project 4 71317277 71320545 - MGP_LPJ_P0065884 Gm11232 protein_coding protein_coding MGP_LPJ_T0010601.1 MGP_LPJ_G0008719.1 mouse_genomes_project 4 31045858 31045987 + Mir8118 miRNA miRNA MGP_LPJ_T0067582.1 MGP_LPJ_G0028683.1 mouse_genomes_project 4 128044048 128081086 + MGP_LPJ_P0067582 Stk40 protein_coding protein_coding MGP_LPJ_T0067583.1 MGP_LPJ_G0028683.1 mouse_genomes_project 4 128044063 128081087 + MGP_LPJ_P0067583 Stk40 protein_coding protein_coding MGP_LPJ_T0067584.1 MGP_LPJ_G0028683.1 mouse_genomes_project 4 128044092 128065181 + MGP_LPJ_P0067584 Stk40 protein_coding protein_coding MGP_LPJ_T0067585.1 MGP_LPJ_G0028683.1 mouse_genomes_project 4 128044126 128057790 + Stk40 protein_coding processed_transcript MGP_LPJ_T0067586.1 MGP_LPJ_G0028683.1 mouse_genomes_project 4 128058363 128069030 + MGP_LPJ_P0067586 Stk40 protein_coding protein_coding MGP_LPJ_T0067587.1 MGP_LPJ_G0028683.1 mouse_genomes_project 4 128068880 128072860 + Stk40 protein_coding processed_transcript MGP_LPJ_T0008019.1 MGP_LPJ_G0006543.1 mouse_genomes_project 4 142283287 142287118 - 2700016F22Rik lincRNA lincRNA MGP_LPJ_T0011586.1 MGP_LPJ_G0009704.1 mouse_genomes_project 4 85974617 85974894 + Gm26069 misc_RNA misc_RNA MGP_LPJ_T0098259.1 MGP_LPJ_G0036540.1 mouse_genomes_project 4 81845235 81845346 + n-R5s187 rRNA rRNA MGP_LPJ_T0065707.1 MGP_LPJ_G0028245.1 mouse_genomes_project 4 57960102 57990433 + MGP_LPJ_P0065707 Dnajc25 protein_coding protein_coding MGP_LPJ_T0065708.1 MGP_LPJ_G0028245.1 mouse_genomes_project 4 57973549 57993913 + MGP_LPJ_P0065708 Dnajc25 protein_coding nonsense_mediated_decay MGP_LPJ_T0065709.1 MGP_LPJ_G0028245.1 mouse_genomes_project 4 57973560 57993913 + MGP_LPJ_P0065709 Dnajc25 protein_coding nonsense_mediated_decay MGP_LPJ_T0065711.1 MGP_LPJ_G0028245.1 mouse_genomes_project 4 57973598 57992904 + MGP_LPJ_P0065711 Dnajc25 protein_coding protein_coding MGP_LPJ_T0004638.1 MGP_LPJ_G0004023.1 mouse_genomes_project 4 159583486 159584269 + Gm27200 antisense antisense MGP_LPJ_T0065773.1 MGP_LPJ_G0028266.1 mouse_genomes_project 4 61713538 61731765 - MGP_LPJ_P0065773 Wdr31 protein_coding protein_coding MGP_LPJ_T0065774.1 MGP_LPJ_G0028266.1 mouse_genomes_project 4 61714540 61731765 - MGP_LPJ_P0065774 Wdr31 protein_coding protein_coding MGP_LPJ_T0065775.1 MGP_LPJ_G0028266.1 mouse_genomes_project 4 61714540 61721435 - MGP_LPJ_P0065775 Wdr31 protein_coding protein_coding MGP_LPJ_T0065776.1 MGP_LPJ_G0028266.1 mouse_genomes_project 4 61714540 61731765 - MGP_LPJ_P0065776 Wdr31 protein_coding protein_coding MGP_LPJ_T0065777.1 MGP_LPJ_G0028266.1 mouse_genomes_project 4 61718450 61720183 - Wdr31 protein_coding retained_intron MGP_LPJ_T0065778.1 MGP_LPJ_G0028266.1 mouse_genomes_project 4 61719295 61721702 - Wdr31 protein_coding retained_intron MGP_LPJ_T0065779.1 MGP_LPJ_G0028266.1 mouse_genomes_project 4 61724196 61731774 - MGP_LPJ_P0065779 Wdr31 protein_coding protein_coding MGP_LPJ_T0065780.1 MGP_LPJ_G0028266.1 mouse_genomes_project 4 61724851 61731752 - MGP_LPJ_P0065780 Wdr31 protein_coding protein_coding MGP_LPJ_T0014771.1 MGP_LPJ_G0012862.1 mouse_genomes_project 4 147992373 147996392 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014450.1 MGP_LPJ_G0012541.1 mouse_genomes_project 4 31061380 31061779 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014783.1 MGP_LPJ_G0012874.1 mouse_genomes_project 4 154792635 154793030 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007950.1 MGP_LPJ_G0006499.1 mouse_genomes_project 4 120333600 120351393 - Gm12866 lincRNA lincRNA MGP_LPJ_T0064852.1 MGP_LPJ_G0028053.1 mouse_genomes_project 4 32422909 32436363 - MGP_LPJ_P0064852 Gm136 protein_coding protein_coding MGP_LPJ_T0068681.1 MGP_LPJ_G0028919.1 mouse_genomes_project 4 141854025 141872590 + MGP_LPJ_P0068681 Tmco4 protein_coding protein_coding MGP_LPJ_T0068682.1 MGP_LPJ_G0028919.1 mouse_genomes_project 4 141854029 141947841 + MGP_LPJ_P0068682 Tmco4 protein_coding protein_coding MGP_LPJ_T0068683.1 MGP_LPJ_G0028919.1 mouse_genomes_project 4 141854042 141947837 + MGP_LPJ_P0068683 Tmco4 protein_coding protein_coding MGP_LPJ_T0068684.1 MGP_LPJ_G0028919.1 mouse_genomes_project 4 141854046 141920859 + Tmco4 protein_coding processed_transcript MGP_LPJ_T0068763.1 MGP_LPJ_G0028938.1 mouse_genomes_project 4 143733475 143749625 - MGP_LPJ_P0068763 Padi6 protein_coding protein_coding MGP_LPJ_T0068764.1 MGP_LPJ_G0028938.1 mouse_genomes_project 4 143738256 143738977 - Padi6 protein_coding processed_transcript MGP_LPJ_T0068765.1 MGP_LPJ_G0028938.1 mouse_genomes_project 4 143742665 143748597 - MGP_LPJ_P0068765 Padi6 protein_coding protein_coding MGP_LPJ_T0011591.1 MGP_LPJ_G0009709.1 mouse_genomes_project 4 106755530 106755841 - Gm24363 misc_RNA misc_RNA MGP_LPJ_T0001460.1 MGP_LPJ_G0001377.1 mouse_genomes_project 4 148379692 148381386 - TEC TEC MGP_LPJ_T0014506.1 MGP_LPJ_G0012597.1 mouse_genomes_project 4 51535777 51536407 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007853.1 MGP_LPJ_G0006421.1 mouse_genomes_project 4 44023995 44025267 + Gm12410 lincRNA lincRNA MGP_LPJ_T0014609.1 MGP_LPJ_G0012700.1 mouse_genomes_project 4 93287190 93287683 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100813.1 MGP_LPJ_G0039076.1 mouse_genomes_project 4 136577130 136577218 - Gm27619 snoRNA snoRNA MGP_LPJ_T0068687.1 MGP_LPJ_G0028921.1 mouse_genomes_project 4 141972734 141983372 - MGP_LPJ_P0068687 Nbl1 protein_coding protein_coding MGP_LPJ_T0068688.1 MGP_LPJ_G0028921.1 mouse_genomes_project 4 141973657 141982485 - Nbl1 protein_coding processed_transcript MGP_LPJ_T0068689.1 MGP_LPJ_G0028921.1 mouse_genomes_project 4 141982454 141983347 - Nbl1 protein_coding processed_transcript MGP_LPJ_T0069436.1 MGP_LPJ_G0029095.1 mouse_genomes_project 4 158300932 158317912 + MGP_LPJ_P0069436 Wrap73 protein_coding protein_coding MGP_LPJ_T0069437.1 MGP_LPJ_G0029095.1 mouse_genomes_project 4 158300969 158317912 + Wrap73 protein_coding processed_transcript MGP_LPJ_T0069438.1 MGP_LPJ_G0029095.1 mouse_genomes_project 4 158313033 158316376 + MGP_LPJ_P0069438 Wrap73 protein_coding protein_coding MGP_LPJ_T0069439.1 MGP_LPJ_G0029095.1 mouse_genomes_project 4 158316310 158330121 + Wrap73 protein_coding processed_transcript MGP_LPJ_T0004627.1 MGP_LPJ_G0004014.1 mouse_genomes_project 4 155350495 155353606 + 4930589P08Rik antisense antisense MGP_LPJ_T0004549.1 MGP_LPJ_G0003955.1 mouse_genomes_project 4 125410382 125413239 + Gm12925 antisense antisense MGP_LPJ_T0004550.1 MGP_LPJ_G0003955.1 mouse_genomes_project 4 125411955 125415720 + Gm12925 antisense antisense MGP_LPJ_T0004551.1 MGP_LPJ_G0003955.1 mouse_genomes_project 4 125412117 125415727 + Gm12925 antisense antisense MGP_LPJ_T0014639.1 MGP_LPJ_G0012730.1 mouse_genomes_project 4 102546490 102547498 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014764.1 MGP_LPJ_G0012855.1 mouse_genomes_project 4 146721100 146723135 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018016.1 MGP_LPJ_G0015476.1 mouse_genomes_project 4 95886827 95890263 + Gm12707 processed_transcript processed_transcript MGP_LPJ_T0007998.1 MGP_LPJ_G0006531.1 mouse_genomes_project 4 134606011 134607307 + Snhg12 lincRNA lincRNA MGP_LPJ_T0007999.1 MGP_LPJ_G0006531.1 mouse_genomes_project 4 134606011 134609592 + Snhg12 lincRNA lincRNA MGP_LPJ_T0008000.1 MGP_LPJ_G0006531.1 mouse_genomes_project 4 134606011 134609590 + Snhg12 lincRNA lincRNA MGP_LPJ_T0008001.1 MGP_LPJ_G0006531.1 mouse_genomes_project 4 134606026 134609263 + Snhg12 lincRNA lincRNA MGP_LPJ_T0008002.1 MGP_LPJ_G0006531.1 mouse_genomes_project 4 134606964 134609592 + Snhg12 lincRNA lincRNA MGP_LPJ_T0008003.1 MGP_LPJ_G0006531.1 mouse_genomes_project 4 134607153 134609563 + Snhg12 lincRNA lincRNA MGP_LPJ_T0008004.1 MGP_LPJ_G0006531.1 mouse_genomes_project 4 134607522 134609592 + Snhg12 lincRNA lincRNA MGP_LPJ_T0068496.1 MGP_LPJ_G0028873.1 mouse_genomes_project 4 138873917 138899706 + Tcea3 protein_coding processed_transcript MGP_LPJ_T0068497.1 MGP_LPJ_G0028873.1 mouse_genomes_project 4 138874140 138903454 + MGP_LPJ_P0068497 Tcea3 protein_coding protein_coding MGP_LPJ_T0068498.1 MGP_LPJ_G0028873.1 mouse_genomes_project 4 138874161 138891749 + MGP_LPJ_P0068498 Tcea3 protein_coding protein_coding MGP_LPJ_T0100808.1 MGP_LPJ_G0039071.1 mouse_genomes_project 4 134607276 134607405 + Snora44 snoRNA snoRNA MGP_LPJ_T0099536.1 MGP_LPJ_G0037799.1 mouse_genomes_project 4 140026631 140026687 + Gm25772 snRNA snRNA MGP_LPJ_T0099492.1 MGP_LPJ_G0037755.1 mouse_genomes_project 4 83499432 83499573 - Gm25899 snRNA snRNA MGP_LPJ_T0004635.1 MGP_LPJ_G0004021.1 mouse_genomes_project 4 159065751 159071083 - Gm13112 antisense antisense MGP_LPJ_T0004636.1 MGP_LPJ_G0004021.1 mouse_genomes_project 4 159066328 159073606 - Gm13112 antisense antisense MGP_LPJ_T0065855.1 MGP_LPJ_G0028285.1 mouse_genomes_project 4 62977134 62978155 - Gm11214 protein_coding translated_processed_pseudogene MGP_LPJ_T0065856.1 MGP_LPJ_G0028285.1 mouse_genomes_project 4 62977134 62977686 - MGP_LPJ_P0065856 Gm11214 protein_coding protein_coding MGP_LPJ_T0066221.1 MGP_LPJ_G0028376.1 mouse_genomes_project 4 96869084 96931928 - MGP_LPJ_P0066221 Cyp2j8 protein_coding protein_coding MGP_LPJ_T0065571.1 MGP_LPJ_G0028209.1 mouse_genomes_project 4 51627029 51627991 - MGP_LPJ_P0065571 Olfr272 protein_coding protein_coding MGP_LPJ_T0065572.1 MGP_LPJ_G0028209.1 mouse_genomes_project 4 51627029 51635369 - MGP_LPJ_P0065572 Olfr272 protein_coding protein_coding MGP_LPJ_T0068991.1 MGP_LPJ_G0029011.1 mouse_genomes_project 4 151493601 151494911 + MGP_LPJ_P0068991 Fv1 protein_coding protein_coding MGP_LPJ_T0068361.1 MGP_LPJ_G0028843.1 mouse_genomes_project 4 137227113 137253574 - MGP_LPJ_P0068361 Ldlrap1 protein_coding protein_coding MGP_LPJ_T0068362.1 MGP_LPJ_G0028843.1 mouse_genomes_project 4 137232139 137235671 - Ldlrap1 protein_coding retained_intron MGP_LPJ_T0068363.1 MGP_LPJ_G0028843.1 mouse_genomes_project 4 137234979 137236413 - Ldlrap1 protein_coding retained_intron MGP_LPJ_T0066557.1 MGP_LPJ_G0028451.1 mouse_genomes_project 4 108167233 108183858 - MGP_LPJ_P0066557 Dio1 protein_coding protein_coding MGP_LPJ_T0066558.1 MGP_LPJ_G0028451.1 mouse_genomes_project 4 108167935 108183831 - MGP_LPJ_P0066558 Dio1 protein_coding nonsense_mediated_decay MGP_LPJ_T0066559.1 MGP_LPJ_G0028451.1 mouse_genomes_project 4 108168102 108183813 - MGP_LPJ_P0066559 Dio1 protein_coding nonsense_mediated_decay MGP_LPJ_T0066560.1 MGP_LPJ_G0028451.1 mouse_genomes_project 4 108168106 108183813 - MGP_LPJ_P0066560 Dio1 protein_coding protein_coding MGP_LPJ_T0066561.1 MGP_LPJ_G0028451.1 mouse_genomes_project 4 108168136 108183807 - MGP_LPJ_P0066561 Dio1 protein_coding protein_coding MGP_LPJ_T0066562.1 MGP_LPJ_G0028451.1 mouse_genomes_project 4 108168136 108183807 - MGP_LPJ_P0066562 Dio1 protein_coding nonsense_mediated_decay MGP_LPJ_T0066563.1 MGP_LPJ_G0028451.1 mouse_genomes_project 4 108168136 108183807 - MGP_LPJ_P0066563 Dio1 protein_coding protein_coding MGP_LPJ_T0066564.1 MGP_LPJ_G0028451.1 mouse_genomes_project 4 108176624 108183755 - Dio1 protein_coding processed_transcript MGP_LPJ_T0014503.1 MGP_LPJ_G0012594.1 mouse_genomes_project 4 50915807 50916509 + processed_pseudogene processed_pseudogene MGP_LPJ_T0069142.1 MGP_LPJ_G0029042.1 mouse_genomes_project 4 153214409 153219714 - MGP_LPJ_P0069142 Rbp7 protein_coding protein_coding MGP_LPJ_T0069143.1 MGP_LPJ_G0029042.1 mouse_genomes_project 4 153214425 153219706 - Rbp7 protein_coding processed_transcript MGP_LPJ_T0100802.1 MGP_LPJ_G0039065.1 mouse_genomes_project 4 132948454 132948537 + Gm24091 snoRNA snoRNA MGP_LPJ_T0068094.1 MGP_LPJ_G0028785.1 mouse_genomes_project 4 134852102 134855024 - MGP_LPJ_P0068094 Atpif1 protein_coding protein_coding MGP_LPJ_T0068095.1 MGP_LPJ_G0028785.1 mouse_genomes_project 4 134852102 134855195 - MGP_LPJ_P0068095 Atpif1 protein_coding protein_coding MGP_LPJ_T0068096.1 MGP_LPJ_G0028785.1 mouse_genomes_project 4 134854023 134855131 - Atpif1 protein_coding retained_intron MGP_LPJ_T0004628.1 MGP_LPJ_G0004015.1 mouse_genomes_project 4 156457679 156458142 + Gm16333 antisense antisense MGP_LPJ_T0014395.1 MGP_LPJ_G0012486.1 mouse_genomes_project 4 15476144 15478254 + processed_pseudogene processed_pseudogene MGP_LPJ_T0064863.1 MGP_LPJ_G0028056.1 mouse_genomes_project 4 32601380 32611132 + MGP_LPJ_P0064863 Cga protein_coding protein_coding MGP_LPJ_T0064864.1 MGP_LPJ_G0028056.1 mouse_genomes_project 4 32601389 32610894 + MGP_LPJ_P0064864 Cga protein_coding protein_coding MGP_LPJ_T0064865.1 MGP_LPJ_G0028056.1 mouse_genomes_project 4 32601389 32610940 + MGP_LPJ_P0064865 Cga protein_coding protein_coding MGP_LPJ_T0069740.1 MGP_LPJ_G0029151.1 mouse_genomes_project 4 160517932 160519325 - MGP_LPJ_P0069740 Isg15 protein_coding protein_coding MGP_LPJ_T0069069.1 MGP_LPJ_G0029030.1 mouse_genomes_project 4 152286472 152289595 + MGP_LPJ_P0069069 Srm protein_coding protein_coding MGP_LPJ_T0069070.1 MGP_LPJ_G0029030.1 mouse_genomes_project 4 152286886 152289175 + Srm protein_coding retained_intron MGP_LPJ_T0069071.1 MGP_LPJ_G0029030.1 mouse_genomes_project 4 152288869 152289969 + Srm protein_coding processed_transcript MGP_LPJ_T0066202.1 MGP_LPJ_G0028371.1 mouse_genomes_project 4 96384803 96438560 + MGP_LPJ_P0066202 Hook1 protein_coding protein_coding MGP_LPJ_T0066203.1 MGP_LPJ_G0028371.1 mouse_genomes_project 4 96384926 96428628 + Hook1 protein_coding processed_transcript MGP_LPJ_T0066204.1 MGP_LPJ_G0028371.1 mouse_genomes_project 4 96384932 96410583 + MGP_LPJ_P0066204 Hook1 protein_coding protein_coding MGP_LPJ_T0066205.1 MGP_LPJ_G0028371.1 mouse_genomes_project 4 96391899 96435487 + Hook1 protein_coding processed_transcript MGP_LPJ_T0066206.1 MGP_LPJ_G0028371.1 mouse_genomes_project 4 96414159 96422674 + Hook1 protein_coding processed_transcript MGP_LPJ_T0066207.1 MGP_LPJ_G0028371.1 mouse_genomes_project 4 96415333 96423067 + Hook1 protein_coding processed_transcript MGP_LPJ_T0066208.1 MGP_LPJ_G0028371.1 mouse_genomes_project 4 96417507 96435629 + Hook1 protein_coding processed_transcript MGP_LPJ_T0066209.1 MGP_LPJ_G0028371.1 mouse_genomes_project 4 96426443 96432771 + Hook1 protein_coding processed_transcript MGP_LPJ_T0066210.1 MGP_LPJ_G0028371.1 mouse_genomes_project 4 96429331 96430821 + Hook1 protein_coding processed_transcript MGP_LPJ_T0066211.1 MGP_LPJ_G0028371.1 mouse_genomes_project 4 96433155 96435376 + Hook1 protein_coding processed_transcript MGP_LPJ_T0066212.1 MGP_LPJ_G0028371.1 mouse_genomes_project 4 96434385 96438538 + Hook1 protein_coding processed_transcript MGP_LPJ_T0014767.1 MGP_LPJ_G0012858.1 mouse_genomes_project 4 147027228 147033983 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100782.1 MGP_LPJ_G0039045.1 mouse_genomes_project 4 94475979 94476108 + Gm23836 snoRNA snoRNA MGP_LPJ_T0010599.1 MGP_LPJ_G0008717.1 mouse_genomes_project 4 23099113 23099223 - Gm26067 miRNA miRNA MGP_LPJ_T0014494.1 MGP_LPJ_G0012585.1 mouse_genomes_project 4 47859222 47859553 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014398.1 MGP_LPJ_G0012489.1 mouse_genomes_project 4 16308657 16309505 + processed_pseudogene processed_pseudogene MGP_LPJ_T0067197.1 MGP_LPJ_G0028576.1 mouse_genomes_project 4 119348607 119393564 - MGP_LPJ_P0067197 Kdm4a protein_coding protein_coding MGP_LPJ_T0067198.1 MGP_LPJ_G0028576.1 mouse_genomes_project 4 119348609 119393175 - MGP_LPJ_P0067198 Kdm4a protein_coding protein_coding MGP_LPJ_T0067199.1 MGP_LPJ_G0028576.1 mouse_genomes_project 4 119348656 119393499 - MGP_LPJ_P0067199 Kdm4a protein_coding protein_coding MGP_LPJ_T0067200.1 MGP_LPJ_G0028576.1 mouse_genomes_project 4 119353661 119393467 - MGP_LPJ_P0067200 Kdm4a protein_coding protein_coding MGP_LPJ_T0067201.1 MGP_LPJ_G0028576.1 mouse_genomes_project 4 119357401 119358376 - Kdm4a protein_coding processed_transcript MGP_LPJ_T0067202.1 MGP_LPJ_G0028576.1 mouse_genomes_project 4 119360667 119374181 - Kdm4a protein_coding processed_transcript MGP_LPJ_T0067658.1 MGP_LPJ_G0028700.1 mouse_genomes_project 4 128743762 128783185 + MGP_LPJ_P0067658 AU040320 protein_coding protein_coding MGP_LPJ_T0067659.1 MGP_LPJ_G0028700.1 mouse_genomes_project 4 128743771 128783296 + MGP_LPJ_P0067659 AU040320 protein_coding protein_coding MGP_LPJ_T0067660.1 MGP_LPJ_G0028700.1 mouse_genomes_project 4 128743773 128863549 + MGP_LPJ_P0067660 AU040320 protein_coding protein_coding MGP_LPJ_T0067661.1 MGP_LPJ_G0028700.1 mouse_genomes_project 4 128743988 128847830 + MGP_LPJ_P0067661 AU040320 protein_coding protein_coding MGP_LPJ_T0067662.1 MGP_LPJ_G0028700.1 mouse_genomes_project 4 128743988 128863549 + MGP_LPJ_P0067662 AU040320 protein_coding protein_coding MGP_LPJ_T0067663.1 MGP_LPJ_G0028700.1 mouse_genomes_project 4 128744012 128783199 + MGP_LPJ_P0067663 AU040320 protein_coding protein_coding MGP_LPJ_T0067664.1 MGP_LPJ_G0028700.1 mouse_genomes_project 4 128744032 128779625 + AU040320 protein_coding processed_transcript MGP_LPJ_T0067665.1 MGP_LPJ_G0028700.1 mouse_genomes_project 4 128744044 128744952 + AU040320 protein_coding processed_transcript MGP_LPJ_T0067666.1 MGP_LPJ_G0028700.1 mouse_genomes_project 4 128808623 128825659 + AU040320 protein_coding processed_transcript MGP_LPJ_T0067667.1 MGP_LPJ_G0028700.1 mouse_genomes_project 4 128828839 128833317 + AU040320 protein_coding processed_transcript MGP_LPJ_T0067668.1 MGP_LPJ_G0028700.1 mouse_genomes_project 4 128844010 128847045 + AU040320 protein_coding processed_transcript MGP_LPJ_T0099490.1 MGP_LPJ_G0037753.1 mouse_genomes_project 4 68593523 68593630 + Gm24697 snRNA snRNA MGP_LPJ_T0068052.1 MGP_LPJ_G0028776.1 mouse_genomes_project 4 134471438 134498544 - MGP_LPJ_P0068052 protein_coding protein_coding MGP_LPJ_T0068053.1 MGP_LPJ_G0028776.1 mouse_genomes_project 4 134472816 134498332 - MGP_LPJ_P0068053 protein_coding protein_coding MGP_LPJ_T0065417.1 MGP_LPJ_G0028166.1 mouse_genomes_project 4 44368092 44452032 + MGP_LPJ_P0065417 Tmod1 protein_coding protein_coding MGP_LPJ_T0065418.1 MGP_LPJ_G0028166.1 mouse_genomes_project 4 44368366 44424772 + MGP_LPJ_P0065418 Tmod1 protein_coding protein_coding MGP_LPJ_T0065419.1 MGP_LPJ_G0028166.1 mouse_genomes_project 4 44411243 44433635 + Tmod1 protein_coding processed_transcript MGP_LPJ_T0065420.1 MGP_LPJ_G0028166.1 mouse_genomes_project 4 44416798 44424756 + Tmod1 protein_coding processed_transcript MGP_LPJ_T0065421.1 MGP_LPJ_G0028166.1 mouse_genomes_project 4 44434169 44450488 + Tmod1 protein_coding processed_transcript MGP_LPJ_T0004465.1 MGP_LPJ_G0003891.1 mouse_genomes_project 4 41673438 41677736 - Gm12454 antisense antisense MGP_LPJ_T0004466.1 MGP_LPJ_G0003891.1 mouse_genomes_project 4 41674667 41677759 - Gm12454 antisense antisense MGP_LPJ_T0014741.1 MGP_LPJ_G0012832.1 mouse_genomes_project 4 136774464 136774725 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098600.1 MGP_LPJ_G0036874.1 mouse_genomes_project 4 83714293 83714772 + Gm26968 sense_intronic sense_intronic MGP_LPJ_T0068479.1 MGP_LPJ_G0028868.1 mouse_genomes_project 4 138600455 138618019 - MGP_LPJ_P0068479 Tceb3 protein_coding protein_coding MGP_LPJ_T0066922.1 MGP_LPJ_G0028525.1 mouse_genomes_project 4 116952239 116960846 + MGP_LPJ_P0066922 6430628N08Rik protein_coding protein_coding MGP_LPJ_T0068821.1 MGP_LPJ_G0028952.1 mouse_genomes_project 4 144291224 144298178 + MGP_LPJ_P0068821 Arhgef19 protein_coding protein_coding MGP_LPJ_T0068822.1 MGP_LPJ_G0028952.1 mouse_genomes_project 4 144291375 144299253 + Arhgef19 protein_coding retained_intron MGP_LPJ_T0068823.1 MGP_LPJ_G0028952.1 mouse_genomes_project 4 144294591 144298122 + MGP_LPJ_P0068823 Arhgef19 protein_coding protein_coding MGP_LPJ_T0068824.1 MGP_LPJ_G0028952.1 mouse_genomes_project 4 144294605 144309286 + MGP_LPJ_P0068824 Arhgef19 protein_coding protein_coding MGP_LPJ_T0068825.1 MGP_LPJ_G0028952.1 mouse_genomes_project 4 144294629 144298764 + MGP_LPJ_P0068825 Arhgef19 protein_coding protein_coding MGP_LPJ_T0068826.1 MGP_LPJ_G0028952.1 mouse_genomes_project 4 144297156 144299207 + MGP_LPJ_P0068826 Arhgef19 protein_coding protein_coding MGP_LPJ_T0068827.1 MGP_LPJ_G0028952.1 mouse_genomes_project 4 144298161 144299872 + MGP_LPJ_P0068827 Arhgef19 protein_coding protein_coding MGP_LPJ_T0068828.1 MGP_LPJ_G0028952.1 mouse_genomes_project 4 144298688 144299739 + Arhgef19 protein_coding retained_intron MGP_LPJ_T0014561.1 MGP_LPJ_G0012652.1 mouse_genomes_project 4 74806770 74807085 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014746.1 MGP_LPJ_G0012837.1 mouse_genomes_project 4 137942834 137943302 - processed_pseudogene processed_pseudogene MGP_LPJ_T0068093.1 MGP_LPJ_G0028784.1 mouse_genomes_project 4 134808743 134829794 - MGP_LPJ_P0068093 Sesn2 protein_coding protein_coding MGP_LPJ_T0100755.1 MGP_LPJ_G0039018.1 mouse_genomes_project 4 48896088 48896220 + Gm25485 snoRNA snoRNA MGP_LPJ_T0004547.1 MGP_LPJ_G0003953.1 mouse_genomes_project 4 121666405 121681545 + Foxo6os antisense antisense MGP_LPJ_T0068959.1 MGP_LPJ_G0029004.1 mouse_genomes_project 4 148312159 148350281 + MGP_LPJ_P0068959 Dhrs3 protein_coding protein_coding MGP_LPJ_T0068960.1 MGP_LPJ_G0029004.1 mouse_genomes_project 4 148312159 148350284 + MGP_LPJ_P0068960 Dhrs3 protein_coding protein_coding MGP_LPJ_T0068961.1 MGP_LPJ_G0029004.1 mouse_genomes_project 4 148312409 148350848 + MGP_LPJ_P0068961 Dhrs3 protein_coding protein_coding MGP_LPJ_T0068962.1 MGP_LPJ_G0029004.1 mouse_genomes_project 4 148312463 148341543 + Dhrs3 protein_coding processed_transcript MGP_LPJ_T0068963.1 MGP_LPJ_G0029004.1 mouse_genomes_project 4 148312469 148341469 + MGP_LPJ_P0068963 Dhrs3 protein_coding protein_coding MGP_LPJ_T0068964.1 MGP_LPJ_G0029004.1 mouse_genomes_project 4 148312551 148350278 + MGP_LPJ_P0068964 Dhrs3 protein_coding nonsense_mediated_decay MGP_LPJ_T0068965.1 MGP_LPJ_G0029004.1 mouse_genomes_project 4 148340445 148341543 + Dhrs3 protein_coding retained_intron MGP_LPJ_T0010598.1 MGP_LPJ_G0008716.1 mouse_genomes_project 4 20753089 20753179 - Gm25978 miRNA miRNA MGP_LPJ_T0068929.1 MGP_LPJ_G0028980.1 mouse_genomes_project 4 146674409 146683078 + MGP_LPJ_P0068929 Pramef8 protein_coding protein_coding MGP_LPJ_T0068930.1 MGP_LPJ_G0028980.1 mouse_genomes_project 4 146674955 146678829 + MGP_LPJ_P0068930 Pramef8 protein_coding protein_coding MGP_LPJ_T0068931.1 MGP_LPJ_G0028980.1 mouse_genomes_project 4 146674970 146683078 + MGP_LPJ_P0068931 Pramef8 protein_coding protein_coding MGP_LPJ_T0068932.1 MGP_LPJ_G0028980.1 mouse_genomes_project 4 146674992 146679655 + MGP_LPJ_P0068932 Pramef8 protein_coding protein_coding MGP_LPJ_T0068933.1 MGP_LPJ_G0028980.1 mouse_genomes_project 4 146674993 146676362 + Pramef8 protein_coding processed_transcript MGP_LPJ_T0066906.1 MGP_LPJ_G0028523.1 mouse_genomes_project 4 116900721 116940822 + Mknk1 protein_coding processed_transcript MGP_LPJ_T0066907.1 MGP_LPJ_G0028523.1 mouse_genomes_project 4 116900721 116940822 + MGP_LPJ_P0066907 Mknk1 protein_coding protein_coding MGP_LPJ_T0066908.1 MGP_LPJ_G0028523.1 mouse_genomes_project 4 116900744 116926172 + MGP_LPJ_P0066908 Mknk1 protein_coding protein_coding MGP_LPJ_T0066909.1 MGP_LPJ_G0028523.1 mouse_genomes_project 4 116900746 116935442 + Mknk1 protein_coding processed_transcript MGP_LPJ_T0066910.1 MGP_LPJ_G0028523.1 mouse_genomes_project 4 116900756 116910101 + Mknk1 protein_coding processed_transcript MGP_LPJ_T0066911.1 MGP_LPJ_G0028523.1 mouse_genomes_project 4 116900756 116940822 + MGP_LPJ_P0066911 Mknk1 protein_coding protein_coding MGP_LPJ_T0066912.1 MGP_LPJ_G0028523.1 mouse_genomes_project 4 116900758 116928139 + MGP_LPJ_P0066912 Mknk1 protein_coding protein_coding MGP_LPJ_T0066913.1 MGP_LPJ_G0028523.1 mouse_genomes_project 4 116900763 116926209 + MGP_LPJ_P0066913 Mknk1 protein_coding protein_coding MGP_LPJ_T0066914.1 MGP_LPJ_G0028523.1 mouse_genomes_project 4 116900767 116918613 + MGP_LPJ_P0066914 Mknk1 protein_coding protein_coding MGP_LPJ_T0066915.1 MGP_LPJ_G0028523.1 mouse_genomes_project 4 116900783 116924868 + Mknk1 protein_coding processed_transcript MGP_LPJ_T0066916.1 MGP_LPJ_G0028523.1 mouse_genomes_project 4 116918547 116940236 + Mknk1 protein_coding processed_transcript MGP_LPJ_T0066917.1 MGP_LPJ_G0028523.1 mouse_genomes_project 4 116918621 116938182 + Mknk1 protein_coding processed_transcript MGP_LPJ_T0066918.1 MGP_LPJ_G0028523.1 mouse_genomes_project 4 116927873 116928934 + Mknk1 protein_coding processed_transcript MGP_LPJ_T0066919.1 MGP_LPJ_G0028523.1 mouse_genomes_project 4 116936342 116938624 + Mknk1 protein_coding processed_transcript MGP_LPJ_T0067703.1 MGP_LPJ_G0028708.1 mouse_genomes_project 4 129349071 129351690 - MGP_LPJ_P0067703 Gja4 protein_coding protein_coding MGP_LPJ_T0066003.1 MGP_LPJ_G0028319.1 mouse_genomes_project 4 83497416 83829996 + MGP_LPJ_P0066003 Ccdc171 protein_coding protein_coding MGP_LPJ_T0066004.1 MGP_LPJ_G0028319.1 mouse_genomes_project 4 83497473 83829773 + MGP_LPJ_P0066004 Ccdc171 protein_coding unknown_likely_coding MGP_LPJ_T0066005.1 MGP_LPJ_G0028319.1 mouse_genomes_project 4 83497485 83525591 + MGP_LPJ_P0066005 Ccdc171 protein_coding protein_coding MGP_LPJ_T0066006.1 MGP_LPJ_G0028319.1 mouse_genomes_project 4 83497510 83829911 + MGP_LPJ_P0066006 Ccdc171 protein_coding nonsense_mediated_decay MGP_LPJ_T0066007.1 MGP_LPJ_G0028319.1 mouse_genomes_project 4 83666725 83761768 + Ccdc171 protein_coding processed_transcript MGP_LPJ_T0066106.1 MGP_LPJ_G0028335.1 mouse_genomes_project 4 88745122 88745872 - MGP_LPJ_P0066106 Ifnb1 protein_coding protein_coding MGP_LPJ_T0067826.1 MGP_LPJ_G0028737.1 mouse_genomes_project 4 131691759 131692526 + MGP_LPJ_P0067826 Fam229a protein_coding protein_coding MGP_LPJ_T0067827.1 MGP_LPJ_G0028737.1 mouse_genomes_project 4 131691809 131692526 + Fam229a protein_coding retained_intron MGP_LPJ_T0100763.1 MGP_LPJ_G0039026.1 mouse_genomes_project 4 55767523 55767656 - Gm25053 snoRNA snoRNA MGP_LPJ_T0066124.1 MGP_LPJ_G0028349.1 mouse_genomes_project 4 89038801 89039362 + MGP_LPJ_P0066124 Ifna4 protein_coding protein_coding MGP_LPJ_T0068659.1 MGP_LPJ_G0028911.1 mouse_genomes_project 4 141584368 141605701 + MGP_LPJ_P0068659 Pla2g2c protein_coding protein_coding MGP_LPJ_T0068660.1 MGP_LPJ_G0028911.1 mouse_genomes_project 4 141584901 141603263 + MGP_LPJ_P0068660 Pla2g2c protein_coding protein_coding MGP_LPJ_T0068661.1 MGP_LPJ_G0028911.1 mouse_genomes_project 4 141584901 141604144 + MGP_LPJ_P0068661 Pla2g2c protein_coding protein_coding MGP_LPJ_T0067654.1 MGP_LPJ_G0028698.1 mouse_genomes_project 4 128705422 128725670 - MGP_LPJ_P0067654 Tfap2e protein_coding protein_coding MGP_LPJ_T0100756.1 MGP_LPJ_G0039019.1 mouse_genomes_project 4 50325979 50326088 + Gm23043 snoRNA snoRNA MGP_LPJ_T0066772.1 MGP_LPJ_G0028487.1 mouse_genomes_project 4 110705222 110710952 - MGP_LPJ_P0066772 Cdkn2c protein_coding protein_coding MGP_LPJ_T0066773.1 MGP_LPJ_G0028487.1 mouse_genomes_project 4 110705222 110712769 - MGP_LPJ_P0066773 Cdkn2c protein_coding protein_coding MGP_LPJ_T0065367.1 MGP_LPJ_G0028154.1 mouse_genomes_project 4 43373506 43376412 - MGP_LPJ_P0065367 protein_coding protein_coding MGP_LPJ_T0065368.1 MGP_LPJ_G0028154.1 mouse_genomes_project 4 43373510 43376406 - MGP_LPJ_P0065368 protein_coding protein_coding MGP_LPJ_T0065369.1 MGP_LPJ_G0028154.1 mouse_genomes_project 4 43373510 43376336 - MGP_LPJ_P0065369 protein_coding protein_coding MGP_LPJ_T0065370.1 MGP_LPJ_G0028154.1 mouse_genomes_project 4 43373693 43376406 - MGP_LPJ_P0065370 protein_coding protein_coding MGP_LPJ_T0066162.1 MGP_LPJ_G0028364.1 mouse_genomes_project 4 94993065 95045905 + MGP_LPJ_P0066162 Ift74 protein_coding protein_coding MGP_LPJ_T0066163.1 MGP_LPJ_G0028364.1 mouse_genomes_project 4 94993065 95079872 + MGP_LPJ_P0066163 Ift74 protein_coding protein_coding MGP_LPJ_T0066166.1 MGP_LPJ_G0028364.1 mouse_genomes_project 4 95064088 95073658 + Ift74 protein_coding processed_transcript MGP_LPJ_T0065613.1 MGP_LPJ_G0028221.1 mouse_genomes_project 4 54322565 54327479 - MGP_LPJ_P0065613 Klf4 protein_coding protein_coding MGP_LPJ_T0065614.1 MGP_LPJ_G0028221.1 mouse_genomes_project 4 54325605 54326773 - MGP_LPJ_P0065614 Klf4 protein_coding protein_coding MGP_LPJ_T0065615.1 MGP_LPJ_G0028221.1 mouse_genomes_project 4 54325714 54327466 - MGP_LPJ_P0065615 Klf4 protein_coding protein_coding MGP_LPJ_T0066120.1 MGP_LPJ_G0028345.1 mouse_genomes_project 4 88940416 88944587 - MGP_LPJ_P0066120 Klhl9 protein_coding protein_coding MGP_LPJ_T0014650.1 MGP_LPJ_G0012741.1 mouse_genomes_project 4 107059497 107059762 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014443.1 MGP_LPJ_G0012534.1 mouse_genomes_project 4 29742021 29742965 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007915.1 MGP_LPJ_G0006472.1 mouse_genomes_project 4 99685355 99700033 - Gm12681 lincRNA lincRNA MGP_LPJ_T0004494.1 MGP_LPJ_G0003917.1 mouse_genomes_project 4 88234379 88235877 + Gm12631 antisense antisense MGP_LPJ_T0067976.1 MGP_LPJ_G0028763.1 mouse_genomes_project 4 132693849 132723876 + MGP_LPJ_P0067976 Snrnp40 protein_coding protein_coding MGP_LPJ_T0067977.1 MGP_LPJ_G0028763.1 mouse_genomes_project 4 132693911 132709234 + Snrnp40 protein_coding processed_transcript MGP_LPJ_T0067978.1 MGP_LPJ_G0028763.1 mouse_genomes_project 4 132696565 132699388 + Snrnp40 protein_coding processed_transcript MGP_LPJ_T0067979.1 MGP_LPJ_G0028763.1 mouse_genomes_project 4 132718686 132722485 + Snrnp40 protein_coding processed_transcript MGP_LPJ_T0068255.1 MGP_LPJ_G0028820.1 mouse_genomes_project 4 136467461 136472629 + MGP_LPJ_P0068255 Zfp683 protein_coding protein_coding MGP_LPJ_T0014789.1 MGP_LPJ_G0012880.1 mouse_genomes_project 4 159760335 159760726 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099538.1 MGP_LPJ_G0037801.1 mouse_genomes_project 4 141699538 141699639 - Gm25280 snRNA snRNA MGP_LPJ_T0064804.1 MGP_LPJ_G0028042.1 mouse_genomes_project 4 30766990 30782560 - MGP_LPJ_P0064804 Pm20d2 protein_coding protein_coding MGP_LPJ_T0064805.1 MGP_LPJ_G0028042.1 mouse_genomes_project 4 30774743 30782864 - MGP_LPJ_P0064805 Pm20d2 protein_coding protein_coding MGP_LPJ_T0065786.1 MGP_LPJ_G0028269.1 mouse_genomes_project 4 61770726 61781336 - Alad protein_coding processed_transcript MGP_LPJ_T0065787.1 MGP_LPJ_G0028269.1 mouse_genomes_project 4 61770726 61781349 - MGP_LPJ_P0065787 Alad protein_coding protein_coding MGP_LPJ_T0065788.1 MGP_LPJ_G0028269.1 mouse_genomes_project 4 61770726 61781373 - MGP_LPJ_P0065788 Alad protein_coding protein_coding MGP_LPJ_T0014530.1 MGP_LPJ_G0012621.1 mouse_genomes_project 4 58360457 58361177 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007942.1 MGP_LPJ_G0006491.1 mouse_genomes_project 4 109627321 109630899 - Gm17354 lincRNA lincRNA MGP_LPJ_T0064409.1 MGP_LPJ_G0027948.1 mouse_genomes_project 4 90068 132843 + MGP_LPJ_P0064409 Tgs1 protein_coding protein_coding MGP_LPJ_T0064410.1 MGP_LPJ_G0027948.1 mouse_genomes_project 4 90143 99122 + Tgs1 protein_coding retained_intron MGP_LPJ_T0064411.1 MGP_LPJ_G0027948.1 mouse_genomes_project 4 109336 114436 + Tgs1 protein_coding processed_transcript MGP_LPJ_T0064412.1 MGP_LPJ_G0027948.1 mouse_genomes_project 4 114383 117875 + Tgs1 protein_coding retained_intron MGP_LPJ_T0064413.1 MGP_LPJ_G0027948.1 mouse_genomes_project 4 120961 130532 + Tgs1 protein_coding retained_intron MGP_LPJ_T0068513.1 MGP_LPJ_G0028876.1 mouse_genomes_project 4 139072842 139099459 + MGP_LPJ_P0068513 Htr1d protein_coding protein_coding MGP_LPJ_T0068514.1 MGP_LPJ_G0028876.1 mouse_genomes_project 4 139072844 139098825 + MGP_LPJ_P0068514 Htr1d protein_coding protein_coding MGP_LPJ_T0068515.1 MGP_LPJ_G0028876.1 mouse_genomes_project 4 139072848 139098825 + MGP_LPJ_P0068515 Htr1d protein_coding protein_coding MGP_LPJ_T0068516.1 MGP_LPJ_G0028876.1 mouse_genomes_project 4 139073883 139097031 + Htr1d protein_coding processed_transcript MGP_LPJ_T0065374.1 MGP_LPJ_G0028156.1 mouse_genomes_project 4 43573949 43594522 + MGP_LPJ_P0065374 Trmt10b protein_coding protein_coding MGP_LPJ_T0065375.1 MGP_LPJ_G0028156.1 mouse_genomes_project 4 43573977 43581211 + MGP_LPJ_P0065375 Trmt10b protein_coding protein_coding MGP_LPJ_T0065376.1 MGP_LPJ_G0028156.1 mouse_genomes_project 4 43577236 43586720 + Trmt10b protein_coding processed_transcript MGP_LPJ_T0065377.1 MGP_LPJ_G0028156.1 mouse_genomes_project 4 43577256 43593533 + Trmt10b protein_coding processed_transcript MGP_LPJ_T0065378.1 MGP_LPJ_G0028156.1 mouse_genomes_project 4 43577256 43581208 + Trmt10b protein_coding processed_transcript MGP_LPJ_T0065379.1 MGP_LPJ_G0028156.1 mouse_genomes_project 4 43577256 43593533 + MGP_LPJ_P0065379 Trmt10b protein_coding protein_coding MGP_LPJ_T0065380.1 MGP_LPJ_G0028156.1 mouse_genomes_project 4 43592488 43593439 + Trmt10b protein_coding processed_transcript MGP_LPJ_T0014590.1 MGP_LPJ_G0012681.1 mouse_genomes_project 4 85271804 85272116 - processed_pseudogene processed_pseudogene MGP_LPJ_T0068202.1 MGP_LPJ_G0028809.1 mouse_genomes_project 4 135908579 135924866 - MGP_LPJ_P0068202 Nudc protein_coding protein_coding MGP_LPJ_T0068203.1 MGP_LPJ_G0028809.1 mouse_genomes_project 4 135910857 135911153 - Nudc protein_coding processed_transcript MGP_LPJ_T0068204.1 MGP_LPJ_G0028809.1 mouse_genomes_project 4 135911955 135913620 - Nudc protein_coding processed_transcript MGP_LPJ_T0007912.1 MGP_LPJ_G0006470.1 mouse_genomes_project 4 95589915 95606198 + Gm12708 lincRNA lincRNA MGP_LPJ_T0007913.1 MGP_LPJ_G0006470.1 mouse_genomes_project 4 95589964 95602719 + Gm12708 lincRNA lincRNA MGP_LPJ_T0099491.1 MGP_LPJ_G0037754.1 mouse_genomes_project 4 83218458 83218565 - Gm23412 snRNA snRNA MGP_LPJ_T0100807.1 MGP_LPJ_G0039070.1 mouse_genomes_project 4 134606800 134606936 + Snora16a snoRNA snoRNA MGP_LPJ_T0014743.1 MGP_LPJ_G0012834.1 mouse_genomes_project 4 137821042 137821352 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065393.1 MGP_LPJ_G0028160.1 mouse_genomes_project 4 43716016 43775572 - Shb protein_coding processed_transcript MGP_LPJ_T0065394.1 MGP_LPJ_G0028160.1 mouse_genomes_project 4 43716016 43823889 - MGP_LPJ_P0065394 Shb protein_coding protein_coding MGP_LPJ_T0065395.1 MGP_LPJ_G0028160.1 mouse_genomes_project 4 43737446 43785611 - Shb protein_coding processed_transcript MGP_LPJ_T0065396.1 MGP_LPJ_G0028160.1 mouse_genomes_project 4 43740246 43782173 - Shb protein_coding retained_intron MGP_LPJ_T0065397.1 MGP_LPJ_G0028160.1 mouse_genomes_project 4 43750871 43782564 - MGP_LPJ_P0065397 Shb protein_coding protein_coding MGP_LPJ_T0065398.1 MGP_LPJ_G0028160.1 mouse_genomes_project 4 43751062 43826032 - MGP_LPJ_P0065398 Shb protein_coding protein_coding MGP_LPJ_T0066700.1 MGP_LPJ_G0028475.1 mouse_genomes_project 4 109811250 109828597 - MGP_LPJ_P0066700 Btf3l4 protein_coding protein_coding MGP_LPJ_T0066701.1 MGP_LPJ_G0028475.1 mouse_genomes_project 4 109813183 109820624 - Btf3l4 protein_coding processed_transcript MGP_LPJ_T0066702.1 MGP_LPJ_G0028475.1 mouse_genomes_project 4 109820131 109825550 - Btf3l4 protein_coding processed_transcript MGP_LPJ_T0068779.1 MGP_LPJ_G0028944.1 mouse_genomes_project 4 144011776 144029801 + MGP_LPJ_P0068779 Atp13a2 protein_coding protein_coding MGP_LPJ_T0068780.1 MGP_LPJ_G0028944.1 mouse_genomes_project 4 144011803 144032028 + Atp13a2 protein_coding retained_intron MGP_LPJ_T0068781.1 MGP_LPJ_G0028944.1 mouse_genomes_project 4 144011893 144023092 + Atp13a2 protein_coding retained_intron MGP_LPJ_T0068782.1 MGP_LPJ_G0028944.1 mouse_genomes_project 4 144011970 144031776 + MGP_LPJ_P0068782 Atp13a2 protein_coding protein_coding MGP_LPJ_T0068783.1 MGP_LPJ_G0028944.1 mouse_genomes_project 4 144020525 144026647 + Atp13a2 protein_coding processed_transcript MGP_LPJ_T0068784.1 MGP_LPJ_G0028944.1 mouse_genomes_project 4 144021135 144025586 + Atp13a2 protein_coding processed_transcript MGP_LPJ_T0068785.1 MGP_LPJ_G0028944.1 mouse_genomes_project 4 144025423 144026803 + Atp13a2 protein_coding processed_transcript MGP_LPJ_T0068786.1 MGP_LPJ_G0028944.1 mouse_genomes_project 4 144029129 144031421 + Atp13a2 protein_coding retained_intron MGP_LPJ_T0007944.1 MGP_LPJ_G0006493.1 mouse_genomes_project 4 115635193 115644047 + Gm12829 lincRNA lincRNA MGP_LPJ_T0014420.1 MGP_LPJ_G0012511.1 mouse_genomes_project 4 23105903 23106370 - processed_pseudogene processed_pseudogene MGP_LPJ_T0069452.1 MGP_LPJ_G0029098.1 mouse_genomes_project 4 158447527 158468991 - Arhgef16 protein_coding retained_intron MGP_LPJ_T0069453.1 MGP_LPJ_G0029098.1 mouse_genomes_project 4 158447527 158451537 - Arhgef16 protein_coding retained_intron MGP_LPJ_T0069454.1 MGP_LPJ_G0029098.1 mouse_genomes_project 4 158447527 158469153 - MGP_LPJ_P0069454 Arhgef16 protein_coding protein_coding MGP_LPJ_T0069455.1 MGP_LPJ_G0029098.1 mouse_genomes_project 4 158447791 158470762 - MGP_LPJ_P0069455 Arhgef16 protein_coding protein_coding MGP_LPJ_T0069456.1 MGP_LPJ_G0029098.1 mouse_genomes_project 4 158451055 158456106 - Arhgef16 protein_coding processed_transcript MGP_LPJ_T0069457.1 MGP_LPJ_G0029098.1 mouse_genomes_project 4 158456057 158468991 - MGP_LPJ_P0069457 Arhgef16 protein_coding protein_coding MGP_LPJ_T0069458.1 MGP_LPJ_G0029098.1 mouse_genomes_project 4 158460181 158470775 - MGP_LPJ_P0069458 Arhgef16 protein_coding protein_coding MGP_LPJ_T0004452.1 MGP_LPJ_G0003880.1 mouse_genomes_project 4 17043104 17048949 - 4930480G23Rik antisense antisense MGP_LPJ_T0001455.1 MGP_LPJ_G0001373.1 mouse_genomes_project 4 139300440 139302917 + TEC TEC MGP_LPJ_T0004607.1 MGP_LPJ_G0003999.1 mouse_genomes_project 4 151634568 151637435 - Gm13054 antisense antisense MGP_LPJ_T0065276.1 MGP_LPJ_G0028141.1 mouse_genomes_project 4 42081650 42156171 + Reck protein_coding processed_transcript MGP_LPJ_T0065277.1 MGP_LPJ_G0028141.1 mouse_genomes_project 4 42081650 42156232 + MGP_LPJ_P0065277 Reck protein_coding protein_coding MGP_LPJ_T0065278.1 MGP_LPJ_G0028141.1 mouse_genomes_project 4 42081726 42109897 + MGP_LPJ_P0065278 Reck protein_coding unknown_likely_coding MGP_LPJ_T0065279.1 MGP_LPJ_G0028141.1 mouse_genomes_project 4 42151827 42153808 + Reck protein_coding processed_transcript MGP_LPJ_T0068955.1 MGP_LPJ_G0029000.1 mouse_genomes_project 4 148071617 148081098 - MGP_LPJ_P0068955 Gm13177 protein_coding protein_coding MGP_LPJ_T0014572.1 MGP_LPJ_G0012663.1 mouse_genomes_project 4 76657040 76657385 + processed_pseudogene processed_pseudogene MGP_LPJ_T0065812.1 MGP_LPJ_G0028274.1 mouse_genomes_project 4 62410062 62420960 - MGP_LPJ_P0065812 Ambp protein_coding protein_coding MGP_LPJ_T0065813.1 MGP_LPJ_G0028274.1 mouse_genomes_project 4 62419484 62421586 - MGP_LPJ_P0065813 Ambp protein_coding protein_coding MGP_LPJ_T0004484.1 MGP_LPJ_G0003907.1 mouse_genomes_project 4 61243582 61285146 + antisense antisense MGP_LPJ_T0014785.1 MGP_LPJ_G0012876.1 mouse_genomes_project 4 156752456 156752712 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010634.1 MGP_LPJ_G0008752.1 mouse_genomes_project 4 119422926 119422986 - Mir7226 miRNA miRNA MGP_LPJ_T0068798.1 MGP_LPJ_G0028947.1 mouse_genomes_project 4 144096324 144108160 - Necap2 protein_coding processed_transcript MGP_LPJ_T0068799.1 MGP_LPJ_G0028947.1 mouse_genomes_project 4 144096324 144108175 - MGP_LPJ_P0068799 Necap2 protein_coding protein_coding MGP_LPJ_T0068800.1 MGP_LPJ_G0028947.1 mouse_genomes_project 4 144097163 144104864 - Necap2 protein_coding retained_intron MGP_LPJ_T0068801.1 MGP_LPJ_G0028947.1 mouse_genomes_project 4 144097211 144098656 - Necap2 protein_coding retained_intron MGP_LPJ_T0068802.1 MGP_LPJ_G0028947.1 mouse_genomes_project 4 144097330 144101662 - Necap2 protein_coding retained_intron MGP_LPJ_T0068803.1 MGP_LPJ_G0028947.1 mouse_genomes_project 4 144097377 144103528 - MGP_LPJ_P0068803 Necap2 protein_coding nonsense_mediated_decay MGP_LPJ_T0068804.1 MGP_LPJ_G0028947.1 mouse_genomes_project 4 144098022 144108175 - Necap2 protein_coding processed_transcript MGP_LPJ_T0068805.1 MGP_LPJ_G0028947.1 mouse_genomes_project 4 144099905 144108175 - Necap2 protein_coding processed_transcript MGP_LPJ_T0068806.1 MGP_LPJ_G0028947.1 mouse_genomes_project 4 144099975 144101596 - Necap2 protein_coding retained_intron MGP_LPJ_T0068807.1 MGP_LPJ_G0028947.1 mouse_genomes_project 4 144100003 144108112 - Necap2 protein_coding retained_intron MGP_LPJ_T0068808.1 MGP_LPJ_G0028947.1 mouse_genomes_project 4 144102151 144108175 - Necap2 protein_coding retained_intron MGP_LPJ_T0011571.1 MGP_LPJ_G0009689.1 mouse_genomes_project 4 15753250 15753581 - Gm24419 misc_RNA misc_RNA MGP_LPJ_T0066829.1 MGP_LPJ_G0028496.1 mouse_genomes_project 4 113054992 113067091 + Skint8 protein_coding processed_transcript MGP_LPJ_T0066830.1 MGP_LPJ_G0028496.1 mouse_genomes_project 4 113054998 113071579 + MGP_LPJ_P0066830 Skint8 protein_coding protein_coding MGP_LPJ_T0066831.1 MGP_LPJ_G0028496.1 mouse_genomes_project 4 113055093 113069783 + Skint8 protein_coding retained_intron MGP_LPJ_T0066832.1 MGP_LPJ_G0028496.1 mouse_genomes_project 4 113055157 113081576 + MGP_LPJ_P0066832 Skint8 protein_coding protein_coding MGP_LPJ_T0066833.1 MGP_LPJ_G0028496.1 mouse_genomes_project 4 113063129 113067239 + Skint8 protein_coding processed_transcript MGP_LPJ_T0014574.1 MGP_LPJ_G0012665.1 mouse_genomes_project 4 78506133 78507410 + processed_pseudogene processed_pseudogene MGP_LPJ_T0068619.1 MGP_LPJ_G0028900.1 mouse_genomes_project 4 141019139 141047766 + MGP_LPJ_P0068619 Hp1bp3 protein_coding protein_coding MGP_LPJ_T0068620.1 MGP_LPJ_G0028900.1 mouse_genomes_project 4 141019379 141047769 + MGP_LPJ_P0068620 Hp1bp3 protein_coding protein_coding MGP_LPJ_T0068621.1 MGP_LPJ_G0028900.1 mouse_genomes_project 4 141019445 141024503 + Hp1bp3 protein_coding processed_transcript MGP_LPJ_T0068622.1 MGP_LPJ_G0028900.1 mouse_genomes_project 4 141019471 141028852 + MGP_LPJ_P0068622 Hp1bp3 protein_coding protein_coding MGP_LPJ_T0068623.1 MGP_LPJ_G0028900.1 mouse_genomes_project 4 141019472 141046231 + MGP_LPJ_P0068623 Hp1bp3 protein_coding protein_coding MGP_LPJ_T0068624.1 MGP_LPJ_G0028900.1 mouse_genomes_project 4 141019479 141032178 + MGP_LPJ_P0068624 Hp1bp3 protein_coding protein_coding MGP_LPJ_T0068625.1 MGP_LPJ_G0028900.1 mouse_genomes_project 4 141019480 141047766 + MGP_LPJ_P0068625 Hp1bp3 protein_coding protein_coding MGP_LPJ_T0068626.1 MGP_LPJ_G0028900.1 mouse_genomes_project 4 141019972 141033150 + MGP_LPJ_P0068626 Hp1bp3 protein_coding protein_coding MGP_LPJ_T0068627.1 MGP_LPJ_G0028900.1 mouse_genomes_project 4 141020113 141033137 + Hp1bp3 protein_coding retained_intron MGP_LPJ_T0068628.1 MGP_LPJ_G0028900.1 mouse_genomes_project 4 141020139 141026396 + MGP_LPJ_P0068628 Hp1bp3 protein_coding protein_coding MGP_LPJ_T0068629.1 MGP_LPJ_G0028900.1 mouse_genomes_project 4 141031985 141043818 + MGP_LPJ_P0068629 Hp1bp3 protein_coding protein_coding MGP_LPJ_T0068630.1 MGP_LPJ_G0028900.1 mouse_genomes_project 4 141033049 141037822 + Hp1bp3 protein_coding processed_transcript MGP_LPJ_T0098605.1 MGP_LPJ_G0036879.1 mouse_genomes_project 4 137975242 137975832 - Gm15979 sense_intronic sense_intronic MGP_LPJ_T0067579.1 MGP_LPJ_G0028682.1 mouse_genomes_project 4 128036712 128038674 + MGP_LPJ_P0067579 Lsm10 protein_coding protein_coding MGP_LPJ_T0067580.1 MGP_LPJ_G0028682.1 mouse_genomes_project 4 128036742 128038671 + MGP_LPJ_P0067580 Lsm10 protein_coding protein_coding MGP_LPJ_T0067581.1 MGP_LPJ_G0028682.1 mouse_genomes_project 4 128036749 128038222 + MGP_LPJ_P0067581 Lsm10 protein_coding protein_coding MGP_LPJ_T0001447.1 MGP_LPJ_G0001366.1 mouse_genomes_project 4 109616405 109618693 - TEC TEC MGP_LPJ_T0100770.1 MGP_LPJ_G0039033.1 mouse_genomes_project 4 72531324 72531457 - Gm25653 snoRNA snoRNA MGP_LPJ_T0001463.1 MGP_LPJ_G0001380.1 mouse_genomes_project 4 156018300 156021161 - TEC TEC MGP_LPJ_T0010654.1 MGP_LPJ_G0008772.1 mouse_genomes_project 4 136930730 136930821 + Gm23634 miRNA miRNA MGP_LPJ_T0004526.1 MGP_LPJ_G0003935.1 mouse_genomes_project 4 109944224 109968426 - 8030443G20Rik antisense antisense MGP_LPJ_T0064968.1 MGP_LPJ_G0028082.1 mouse_genomes_project 4 39408745 39488948 - MGP_LPJ_P0064968 Kif24 protein_coding protein_coding MGP_LPJ_T0064969.1 MGP_LPJ_G0028082.1 mouse_genomes_project 4 39409611 39488956 - MGP_LPJ_P0064969 Kif24 protein_coding protein_coding MGP_LPJ_T0064970.1 MGP_LPJ_G0028082.1 mouse_genomes_project 4 39413185 39433939 - Kif24 protein_coding processed_transcript MGP_LPJ_T0064971.1 MGP_LPJ_G0028082.1 mouse_genomes_project 4 39423234 39424720 - Kif24 protein_coding processed_transcript MGP_LPJ_T0064972.1 MGP_LPJ_G0028082.1 mouse_genomes_project 4 39438263 39488948 - Kif24 protein_coding processed_transcript MGP_LPJ_T0064973.1 MGP_LPJ_G0028082.1 mouse_genomes_project 4 39454091 39488954 - MGP_LPJ_P0064973 Kif24 protein_coding protein_coding MGP_LPJ_T0064974.1 MGP_LPJ_G0028082.1 mouse_genomes_project 4 39472874 39488954 - Kif24 protein_coding processed_transcript MGP_LPJ_T0066469.1 MGP_LPJ_G0028437.1 mouse_genomes_project 4 107488620 107491091 + MGP_LPJ_P0066469 Pars2 protein_coding protein_coding MGP_LPJ_T0066470.1 MGP_LPJ_G0028437.1 mouse_genomes_project 4 107488649 107492832 + MGP_LPJ_P0066470 Pars2 protein_coding protein_coding MGP_LPJ_T0066471.1 MGP_LPJ_G0028437.1 mouse_genomes_project 4 107488654 107490418 + Pars2 protein_coding processed_transcript MGP_LPJ_T0066472.1 MGP_LPJ_G0028437.1 mouse_genomes_project 4 107488657 107492834 + MGP_LPJ_P0066472 Pars2 protein_coding protein_coding MGP_LPJ_T0065303.1 MGP_LPJ_G0028146.1 mouse_genomes_project 4 42351557 42397547 - MGP_LPJ_P0065303 Rnf38 protein_coding protein_coding MGP_LPJ_T0065304.1 MGP_LPJ_G0028146.1 mouse_genomes_project 4 42351560 42397265 - MGP_LPJ_P0065304 Rnf38 protein_coding protein_coding MGP_LPJ_T0065305.1 MGP_LPJ_G0028146.1 mouse_genomes_project 4 42354767 42387682 - MGP_LPJ_P0065305 Rnf38 protein_coding protein_coding MGP_LPJ_T0065306.1 MGP_LPJ_G0028146.1 mouse_genomes_project 4 42354771 42397587 - MGP_LPJ_P0065306 Rnf38 protein_coding nonsense_mediated_decay MGP_LPJ_T0065307.1 MGP_LPJ_G0028146.1 mouse_genomes_project 4 42354853 42368241 - Rnf38 protein_coding processed_transcript MGP_LPJ_T0065308.1 MGP_LPJ_G0028146.1 mouse_genomes_project 4 42354855 42368120 - Rnf38 protein_coding processed_transcript MGP_LPJ_T0065309.1 MGP_LPJ_G0028146.1 mouse_genomes_project 4 42370997 42381293 - MGP_LPJ_P0065309 Rnf38 protein_coding protein_coding MGP_LPJ_T0065310.1 MGP_LPJ_G0028146.1 mouse_genomes_project 4 42371051 42387793 - MGP_LPJ_P0065310 Rnf38 protein_coding protein_coding MGP_LPJ_T0065311.1 MGP_LPJ_G0028146.1 mouse_genomes_project 4 42371095 42397944 - MGP_LPJ_P0065311 Rnf38 protein_coding protein_coding MGP_LPJ_T0065312.1 MGP_LPJ_G0028146.1 mouse_genomes_project 4 42377828 42397474 - Rnf38 protein_coding processed_transcript MGP_LPJ_T0065313.1 MGP_LPJ_G0028146.1 mouse_genomes_project 4 42377835 42460559 - Rnf38 protein_coding processed_transcript MGP_LPJ_T0065314.1 MGP_LPJ_G0028146.1 mouse_genomes_project 4 42377864 42397861 - Rnf38 protein_coding processed_transcript MGP_LPJ_T0065315.1 MGP_LPJ_G0028146.1 mouse_genomes_project 4 42387711 42397431 - Rnf38 protein_coding processed_transcript MGP_LPJ_T0014550.1 MGP_LPJ_G0012641.1 mouse_genomes_project 4 71429025 71429999 + processed_pseudogene processed_pseudogene MGP_LPJ_T0018006.1 MGP_LPJ_G0015468.1 mouse_genomes_project 4 78022995 78025231 + B230208B08Rik processed_transcript processed_transcript MGP_LPJ_T0010589.1 MGP_LPJ_G0008707.1 mouse_genomes_project 4 7542890 7543021 - Mir3471-1 miRNA miRNA MGP_LPJ_T0066054.1 MGP_LPJ_G0028326.1 mouse_genomes_project 4 86676515 86709739 - MGP_LPJ_P0066054 Haus6 protein_coding protein_coding MGP_LPJ_T0066055.1 MGP_LPJ_G0028326.1 mouse_genomes_project 4 86682683 86709739 - Haus6 protein_coding processed_transcript MGP_LPJ_T0066056.1 MGP_LPJ_G0028326.1 mouse_genomes_project 4 86700562 86709703 - Haus6 protein_coding processed_transcript MGP_LPJ_T0066057.1 MGP_LPJ_G0028326.1 mouse_genomes_project 4 86703322 86709733 - MGP_LPJ_P0066057 Haus6 protein_coding protein_coding MGP_LPJ_T0068450.1 MGP_LPJ_G0028863.1 mouse_genomes_project 4 138514009 138534051 + MGP_LPJ_P0068450 Fuca1 protein_coding protein_coding MGP_LPJ_T0068451.1 MGP_LPJ_G0028863.1 mouse_genomes_project 4 138523063 138527922 + Fuca1 protein_coding processed_transcript MGP_LPJ_T0068452.1 MGP_LPJ_G0028863.1 mouse_genomes_project 4 138526148 138533047 + Fuca1 protein_coding processed_transcript MGP_LPJ_T0068453.1 MGP_LPJ_G0028863.1 mouse_genomes_project 4 138526275 138528506 + Fuca1 protein_coding processed_transcript MGP_LPJ_T0068454.1 MGP_LPJ_G0028863.1 mouse_genomes_project 4 138530406 138533047 + Fuca1 protein_coding processed_transcript MGP_LPJ_T0014385.1 MGP_LPJ_G0012476.1 mouse_genomes_project 4 13047599 13047729 - processed_pseudogene processed_pseudogene MGP_LPJ_T0067442.1 MGP_LPJ_G0028642.1 mouse_genomes_project 4 124681060 124682148 + MGP_LPJ_P0067442 Mycl protein_coding protein_coding MGP_LPJ_T0067443.1 MGP_LPJ_G0028642.1 mouse_genomes_project 4 124681352 124691086 + MGP_LPJ_P0067443 Mycl protein_coding protein_coding MGP_LPJ_T0067444.1 MGP_LPJ_G0028642.1 mouse_genomes_project 4 124681507 124691086 + MGP_LPJ_P0067444 Mycl protein_coding protein_coding MGP_LPJ_T0067445.1 MGP_LPJ_G0028642.1 mouse_genomes_project 4 124687483 124689071 + Mycl protein_coding processed_transcript MGP_LPJ_T0067446.1 MGP_LPJ_G0028642.1 mouse_genomes_project 4 124687942 124689121 + Mycl protein_coding processed_transcript MGP_LPJ_T0099483.1 MGP_LPJ_G0037746.1 mouse_genomes_project 4 47811550 47811656 + Gm22685 snRNA snRNA MGP_LPJ_T0014556.1 MGP_LPJ_G0012647.1 mouse_genomes_project 4 73675693 73676489 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014393.1 MGP_LPJ_G0012484.1 mouse_genomes_project 4 15208097 15208319 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101342.1 MGP_LPJ_G0039548.1 mouse_genomes_project 4 58854979 58855522 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0069614.1 MGP_LPJ_G0029125.1 mouse_genomes_project 4 159958174 159960314 + MGP_LPJ_P0069614 Fndc10 protein_coding protein_coding MGP_LPJ_T0008041.1 MGP_LPJ_G0006564.1 mouse_genomes_project 4 154590740 154602461 - Gm16079 lincRNA lincRNA MGP_LPJ_T0004539.1 MGP_LPJ_G0003945.1 mouse_genomes_project 4 118607473 118617827 + Gm12828 antisense antisense MGP_LPJ_T0004563.1 MGP_LPJ_G0003965.1 mouse_genomes_project 4 131089273 131093668 + Gm15904 antisense antisense MGP_LPJ_T0066748.1 MGP_LPJ_G0028483.1 mouse_genomes_project 4 110303184 110408202 + MGP_LPJ_P0066748 Eps15 protein_coding protein_coding MGP_LPJ_T0066749.1 MGP_LPJ_G0028483.1 mouse_genomes_project 4 110303219 110406072 + MGP_LPJ_P0066749 Eps15 protein_coding nonsense_mediated_decay MGP_LPJ_T0066750.1 MGP_LPJ_G0028483.1 mouse_genomes_project 4 110303292 110333878 + MGP_LPJ_P0066750 Eps15 protein_coding protein_coding MGP_LPJ_T0066751.1 MGP_LPJ_G0028483.1 mouse_genomes_project 4 110303328 110405845 + MGP_LPJ_P0066751 Eps15 protein_coding protein_coding MGP_LPJ_T0066752.1 MGP_LPJ_G0028483.1 mouse_genomes_project 4 110303328 110405845 + MGP_LPJ_P0066752 Eps15 protein_coding protein_coding MGP_LPJ_T0066753.1 MGP_LPJ_G0028483.1 mouse_genomes_project 4 110325448 110326910 + Eps15 protein_coding retained_intron MGP_LPJ_T0066754.1 MGP_LPJ_G0028483.1 mouse_genomes_project 4 110330119 110334177 + Eps15 protein_coding retained_intron MGP_LPJ_T0066755.1 MGP_LPJ_G0028483.1 mouse_genomes_project 4 110367950 110406951 + MGP_LPJ_P0066755 Eps15 protein_coding protein_coding MGP_LPJ_T0066756.1 MGP_LPJ_G0028483.1 mouse_genomes_project 4 110368144 110385593 + Eps15 protein_coding retained_intron MGP_LPJ_T0066757.1 MGP_LPJ_G0028483.1 mouse_genomes_project 4 110390991 110406168 + MGP_LPJ_P0066757 Eps15 protein_coding protein_coding MGP_LPJ_T0066758.1 MGP_LPJ_G0028483.1 mouse_genomes_project 4 110391035 110403238 + Eps15 protein_coding processed_transcript MGP_LPJ_T0099548.1 MGP_LPJ_G0037811.1 mouse_genomes_project 4 160331933 160332034 - Gm25982 snRNA snRNA MGP_LPJ_T0064736.1 MGP_LPJ_G0028027.1 mouse_genomes_project 4 22461658 22496855 - MGP_LPJ_P0064736 Ufl1 protein_coding protein_coding MGP_LPJ_T0064737.1 MGP_LPJ_G0028027.1 mouse_genomes_project 4 22461662 22496863 - Ufl1 protein_coding retained_intron MGP_LPJ_T0064738.1 MGP_LPJ_G0028027.1 mouse_genomes_project 4 22484184 22496851 - Ufl1 protein_coding processed_transcript MGP_LPJ_T0007898.1 MGP_LPJ_G0006458.1 mouse_genomes_project 4 84107222 84111162 - Gm12414 lincRNA lincRNA MGP_LPJ_T0066223.1 MGP_LPJ_G0028378.1 mouse_genomes_project 4 96991373 97014927 - MGP_LPJ_P0066223 Cyp2j9 protein_coding protein_coding MGP_LPJ_T0066224.1 MGP_LPJ_G0028378.1 mouse_genomes_project 4 96999648 97014927 - Cyp2j9 protein_coding retained_intron MGP_LPJ_T0010666.1 MGP_LPJ_G0008784.1 mouse_genomes_project 4 142572954 142573024 + Mir7020 miRNA miRNA MGP_LPJ_T0067302.1 MGP_LPJ_G0028606.1 mouse_genomes_project 4 120557075 120561518 + MGP_LPJ_P0067302 Cldn19 protein_coding protein_coding MGP_LPJ_T0067303.1 MGP_LPJ_G0028606.1 mouse_genomes_project 4 120557170 120564091 + MGP_LPJ_P0067303 Cldn19 protein_coding protein_coding MGP_LPJ_T0066591.1 MGP_LPJ_G0028456.1 mouse_genomes_project 4 108701248 108774911 + MGP_LPJ_P0066591 Lrp8 protein_coding nonsense_mediated_decay MGP_LPJ_T0066592.1 MGP_LPJ_G0028456.1 mouse_genomes_project 4 108701264 108773560 + MGP_LPJ_P0066592 Lrp8 protein_coding protein_coding MGP_LPJ_T0066593.1 MGP_LPJ_G0028456.1 mouse_genomes_project 4 108701301 108774644 + MGP_LPJ_P0066593 Lrp8 protein_coding protein_coding MGP_LPJ_T0066594.1 MGP_LPJ_G0028456.1 mouse_genomes_project 4 108701400 108773560 + MGP_LPJ_P0066594 Lrp8 protein_coding protein_coding MGP_LPJ_T0066595.1 MGP_LPJ_G0028456.1 mouse_genomes_project 4 108701400 108773104 + MGP_LPJ_P0066595 Lrp8 protein_coding protein_coding MGP_LPJ_T0066596.1 MGP_LPJ_G0028456.1 mouse_genomes_project 4 108701830 108750188 + Lrp8 protein_coding processed_transcript MGP_LPJ_T0066597.1 MGP_LPJ_G0028456.1 mouse_genomes_project 4 108702239 108773560 + Lrp8 protein_coding processed_transcript MGP_LPJ_T0066598.1 MGP_LPJ_G0028456.1 mouse_genomes_project 4 108722001 108773560 + Lrp8 protein_coding processed_transcript MGP_LPJ_T0066599.1 MGP_LPJ_G0028456.1 mouse_genomes_project 4 108729798 108736047 + Lrp8 protein_coding retained_intron MGP_LPJ_T0066600.1 MGP_LPJ_G0028456.1 mouse_genomes_project 4 108729818 108777584 + MGP_LPJ_P0066600 Lrp8 protein_coding protein_coding MGP_LPJ_T0066601.1 MGP_LPJ_G0028456.1 mouse_genomes_project 4 108745027 108747122 + Lrp8 protein_coding retained_intron MGP_LPJ_T0066602.1 MGP_LPJ_G0028456.1 mouse_genomes_project 4 108748953 108755688 + Lrp8 protein_coding processed_transcript MGP_LPJ_T0067640.1 MGP_LPJ_G0028694.1 mouse_genomes_project 4 128460998 128506530 - MGP_LPJ_P0067640 Ago4 protein_coding protein_coding MGP_LPJ_T0067641.1 MGP_LPJ_G0028694.1 mouse_genomes_project 4 128488655 128490091 - Ago4 protein_coding processed_transcript MGP_LPJ_T0018032.1 MGP_LPJ_G0015487.1 mouse_genomes_project 4 120241171 120269197 + Gm12861 processed_transcript processed_transcript MGP_LPJ_T0007905.1 MGP_LPJ_G0006463.1 mouse_genomes_project 4 90431572 90436058 + Gm12629 lincRNA lincRNA MGP_LPJ_T0004448.1 MGP_LPJ_G0003878.1 mouse_genomes_project 4 11862542 11886434 + Gm11837 antisense antisense MGP_LPJ_T0004449.1 MGP_LPJ_G0003878.1 mouse_genomes_project 4 11863300 11886571 + Gm11837 antisense antisense MGP_LPJ_T0004450.1 MGP_LPJ_G0003878.1 mouse_genomes_project 4 11863315 11886446 + Gm11837 antisense antisense MGP_LPJ_T0010607.1 MGP_LPJ_G0008725.1 mouse_genomes_project 4 38822934 38823039 - Gm25931 miRNA miRNA MGP_LPJ_T0067071.1 MGP_LPJ_G0028554.1 mouse_genomes_project 4 118150289 118220331 + MGP_LPJ_P0067071 Eif2b3 protein_coding protein_coding MGP_LPJ_T0067072.1 MGP_LPJ_G0028554.1 mouse_genomes_project 4 118150310 118206030 + MGP_LPJ_P0067072 Eif2b3 protein_coding protein_coding MGP_LPJ_T0067073.1 MGP_LPJ_G0028554.1 mouse_genomes_project 4 118174997 118191032 + Eif2b3 protein_coding processed_transcript MGP_LPJ_T0067074.1 MGP_LPJ_G0028554.1 mouse_genomes_project 4 118199240 118207070 + Eif2b3 protein_coding processed_transcript MGP_LPJ_T0067075.1 MGP_LPJ_G0028554.1 mouse_genomes_project 4 118200232 118220782 + Eif2b3 protein_coding processed_transcript MGP_LPJ_T0067076.1 MGP_LPJ_G0028554.1 mouse_genomes_project 4 118214985 118220324 + Eif2b3 protein_coding processed_transcript MGP_LPJ_T0014408.1 MGP_LPJ_G0012499.1 mouse_genomes_project 4 19690466 19691038 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014461.1 MGP_LPJ_G0012552.1 mouse_genomes_project 4 35028591 35029059 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065135.1 MGP_LPJ_G0028114.1 mouse_genomes_project 4 41424016 41506117 + Atp8b5 protein_coding retained_intron MGP_LPJ_T0065136.1 MGP_LPJ_G0028114.1 mouse_genomes_project 4 41424027 41538667 + MGP_LPJ_P0065136 Atp8b5 protein_coding protein_coding MGP_LPJ_T0065137.1 MGP_LPJ_G0028114.1 mouse_genomes_project 4 41424042 41538669 + MGP_LPJ_P0065137 Atp8b5 protein_coding nonsense_mediated_decay MGP_LPJ_T0065138.1 MGP_LPJ_G0028114.1 mouse_genomes_project 4 41424042 41483920 + MGP_LPJ_P0065138 Atp8b5 protein_coding nonsense_mediated_decay MGP_LPJ_T0065139.1 MGP_LPJ_G0028114.1 mouse_genomes_project 4 41424048 41485596 + MGP_LPJ_P0065139 Atp8b5 protein_coding protein_coding MGP_LPJ_T0069468.1 MGP_LPJ_G0029100.1 mouse_genomes_project 4 158519101 158535656 + MGP_LPJ_P0069468 B230104I21Rik protein_coding protein_coding MGP_LPJ_T0014678.1 MGP_LPJ_G0012769.1 mouse_genomes_project 4 117976321 117976768 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004618.1 MGP_LPJ_G0004007.1 mouse_genomes_project 4 153111388 153131364 + Ube4bos1 antisense antisense MGP_LPJ_T0004619.1 MGP_LPJ_G0004007.1 mouse_genomes_project 4 153111417 153124272 + Ube4bos1 antisense antisense MGP_LPJ_T0065197.1 MGP_LPJ_G0028122.1 mouse_genomes_project 4 41675373 41685756 + MGP_LPJ_P0065197 Car9 protein_coding protein_coding MGP_LPJ_T0065198.1 MGP_LPJ_G0028122.1 mouse_genomes_project 4 41676035 41686375 + Car9 protein_coding processed_transcript MGP_LPJ_T0065199.1 MGP_LPJ_G0028122.1 mouse_genomes_project 4 41676323 41685704 + MGP_LPJ_P0065199 Car9 protein_coding protein_coding MGP_LPJ_T0065200.1 MGP_LPJ_G0028122.1 mouse_genomes_project 4 41676888 41677986 + Car9 protein_coding processed_transcript MGP_LPJ_T0065201.1 MGP_LPJ_G0028122.1 mouse_genomes_project 4 41677554 41678047 + Car9 protein_coding processed_transcript MGP_LPJ_T0065202.1 MGP_LPJ_G0028122.1 mouse_genomes_project 4 41677948 41685101 + Car9 protein_coding processed_transcript MGP_LPJ_T0065203.1 MGP_LPJ_G0028122.1 mouse_genomes_project 4 41684777 41685588 + Car9 protein_coding processed_transcript MGP_LPJ_T0069664.1 MGP_LPJ_G0029137.1 mouse_genomes_project 4 160157203 160161284 - MGP_LPJ_P0069664 Tas1r3 protein_coding protein_coding MGP_LPJ_T0014552.1 MGP_LPJ_G0012643.1 mouse_genomes_project 4 72518940 72519538 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014618.1 MGP_LPJ_G0012709.1 mouse_genomes_project 4 95957960 95958289 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100757.1 MGP_LPJ_G0039020.1 mouse_genomes_project 4 52672415 52672540 + Gm23745 snoRNA snoRNA MGP_LPJ_T0014710.1 MGP_LPJ_G0012801.1 mouse_genomes_project 4 124963061 124964046 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014484.1 MGP_LPJ_G0012575.1 mouse_genomes_project 4 44588508 44589385 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100795.1 MGP_LPJ_G0039058.1 mouse_genomes_project 4 122502306 122502431 - Gm26186 snoRNA snoRNA MGP_LPJ_T0069643.1 MGP_LPJ_G0029134.1 mouse_genomes_project 4 160127333 160128793 + MGP_LPJ_P0069643 Aurkaip1 protein_coding protein_coding MGP_LPJ_T0069644.1 MGP_LPJ_G0029134.1 mouse_genomes_project 4 160127412 160129394 + MGP_LPJ_P0069644 Aurkaip1 protein_coding protein_coding MGP_LPJ_T0069645.1 MGP_LPJ_G0029134.1 mouse_genomes_project 4 160127674 160128519 + Aurkaip1 protein_coding retained_intron MGP_LPJ_T0069646.1 MGP_LPJ_G0029134.1 mouse_genomes_project 4 160127714 160129116 + MGP_LPJ_P0069646 Aurkaip1 protein_coding protein_coding MGP_LPJ_T0069647.1 MGP_LPJ_G0029134.1 mouse_genomes_project 4 160127720 160128583 + Aurkaip1 protein_coding processed_transcript MGP_LPJ_T0069648.1 MGP_LPJ_G0029134.1 mouse_genomes_project 4 160127724 160129086 + MGP_LPJ_P0069648 Aurkaip1 protein_coding protein_coding MGP_LPJ_T0064425.1 MGP_LPJ_G0027953.1 mouse_genomes_project 4 478233 482863 + MGP_LPJ_P0064425 Chchd7 protein_coding protein_coding MGP_LPJ_T0064426.1 MGP_LPJ_G0027953.1 mouse_genomes_project 4 478233 482858 + MGP_LPJ_P0064426 Chchd7 protein_coding protein_coding MGP_LPJ_T0064427.1 MGP_LPJ_G0027953.1 mouse_genomes_project 4 478235 482807 + MGP_LPJ_P0064427 Chchd7 protein_coding protein_coding MGP_LPJ_T0064428.1 MGP_LPJ_G0027953.1 mouse_genomes_project 4 478259 482385 + MGP_LPJ_P0064428 Chchd7 protein_coding protein_coding MGP_LPJ_T0064429.1 MGP_LPJ_G0027953.1 mouse_genomes_project 4 478259 482856 + MGP_LPJ_P0064429 Chchd7 protein_coding protein_coding MGP_LPJ_T0064430.1 MGP_LPJ_G0027953.1 mouse_genomes_project 4 478259 482863 + MGP_LPJ_P0064430 Chchd7 protein_coding protein_coding MGP_LPJ_T0064431.1 MGP_LPJ_G0027953.1 mouse_genomes_project 4 478259 490375 + MGP_LPJ_P0064431 Chchd7 protein_coding nonsense_mediated_decay MGP_LPJ_T0064432.1 MGP_LPJ_G0027953.1 mouse_genomes_project 4 478259 482863 + MGP_LPJ_P0064432 Chchd7 protein_coding protein_coding MGP_LPJ_T0064433.1 MGP_LPJ_G0027953.1 mouse_genomes_project 4 478265 482839 + MGP_LPJ_P0064433 Chchd7 protein_coding protein_coding MGP_LPJ_T0064434.1 MGP_LPJ_G0027953.1 mouse_genomes_project 4 478388 482741 + MGP_LPJ_P0064434 Chchd7 protein_coding protein_coding MGP_LPJ_T0064435.1 MGP_LPJ_G0027953.1 mouse_genomes_project 4 478767 480754 + Chchd7 protein_coding retained_intron MGP_LPJ_T0064436.1 MGP_LPJ_G0027953.1 mouse_genomes_project 4 478845 482861 + MGP_LPJ_P0064436 Chchd7 protein_coding nonsense_mediated_decay MGP_LPJ_T0064437.1 MGP_LPJ_G0027953.1 mouse_genomes_project 4 480188 482860 + MGP_LPJ_P0064437 Chchd7 protein_coding protein_coding MGP_LPJ_T0064438.1 MGP_LPJ_G0027953.1 mouse_genomes_project 4 482748 489540 + Chchd7 protein_coding processed_transcript MGP_LPJ_T0064439.1 MGP_LPJ_G0027953.1 mouse_genomes_project 4 486134 489201 + Chchd7 protein_coding retained_intron MGP_LPJ_T0011569.1 MGP_LPJ_G0009687.1 mouse_genomes_project 4 8699705 8700021 + Gm22477 misc_RNA misc_RNA MGP_LPJ_T0067256.1 MGP_LPJ_G0028591.1 mouse_genomes_project 4 119984318 119985267 + MGP_LPJ_P0067256 protein_coding protein_coding MGP_LPJ_T0065859.1 MGP_LPJ_G0028288.1 mouse_genomes_project 4 63284631 63349596 - MGP_LPJ_P0065859 Tnc protein_coding protein_coding MGP_LPJ_T0065860.1 MGP_LPJ_G0028288.1 mouse_genomes_project 4 63284631 63375836 - MGP_LPJ_P0065860 Tnc protein_coding protein_coding MGP_LPJ_T0065861.1 MGP_LPJ_G0028288.1 mouse_genomes_project 4 63284631 63349596 - MGP_LPJ_P0065861 Tnc protein_coding protein_coding MGP_LPJ_T0065862.1 MGP_LPJ_G0028288.1 mouse_genomes_project 4 63341539 63349596 - MGP_LPJ_P0065862 Tnc protein_coding protein_coding MGP_LPJ_T0014716.1 MGP_LPJ_G0012807.1 mouse_genomes_project 4 125710596 125710918 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100762.1 MGP_LPJ_G0039025.1 mouse_genomes_project 4 55623279 55623399 - Gm22952 snoRNA snoRNA MGP_LPJ_T0010674.1 MGP_LPJ_G0008792.1 mouse_genomes_project 4 153459502 153459566 - Mir7023 miRNA miRNA MGP_LPJ_T0068140.1 MGP_LPJ_G0028795.1 mouse_genomes_project 4 135239399 135264240 - MGP_LPJ_P0068140 Fam76a protein_coding protein_coding MGP_LPJ_T0068141.1 MGP_LPJ_G0028795.1 mouse_genomes_project 4 135240493 135264175 - MGP_LPJ_P0068141 Fam76a protein_coding protein_coding MGP_LPJ_T0068142.1 MGP_LPJ_G0028795.1 mouse_genomes_project 4 135253607 135262591 - MGP_LPJ_P0068142 Fam76a protein_coding protein_coding MGP_LPJ_T0007918.1 MGP_LPJ_G0006475.1 mouse_genomes_project 4 100601590 100615513 + Gm12702 lincRNA lincRNA MGP_LPJ_T0067588.1 MGP_LPJ_G0028684.1 mouse_genomes_project 4 128089204 128091335 + MGP_LPJ_P0067588 Eva1b protein_coding protein_coding MGP_LPJ_T0067589.1 MGP_LPJ_G0028684.1 mouse_genomes_project 4 128089463 128091336 + MGP_LPJ_P0067589 Eva1b protein_coding protein_coding MGP_LPJ_T0067590.1 MGP_LPJ_G0028684.1 mouse_genomes_project 4 128089992 128091326 + MGP_LPJ_P0067590 Eva1b protein_coding protein_coding MGP_LPJ_T0004632.1 MGP_LPJ_G0004019.1 mouse_genomes_project 4 158801508 158804514 + Gm13134 antisense antisense MGP_LPJ_T0004633.1 MGP_LPJ_G0004019.1 mouse_genomes_project 4 158801626 158803016 + Gm13134 antisense antisense MGP_LPJ_T0014374.1 MGP_LPJ_G0012465.1 mouse_genomes_project 4 11055978 11065040 + processed_pseudogene processed_pseudogene MGP_LPJ_T0069638.1 MGP_LPJ_G0029133.1 mouse_genomes_project 4 160108004 160120019 + MGP_LPJ_P0069638 Ccnl2 protein_coding protein_coding MGP_LPJ_T0069639.1 MGP_LPJ_G0029133.1 mouse_genomes_project 4 160108016 160120019 + Ccnl2 protein_coding retained_intron MGP_LPJ_T0069640.1 MGP_LPJ_G0029133.1 mouse_genomes_project 4 160108034 160117315 + Ccnl2 protein_coding retained_intron MGP_LPJ_T0069641.1 MGP_LPJ_G0029133.1 mouse_genomes_project 4 160108293 160111356 + Ccnl2 protein_coding retained_intron MGP_LPJ_T0069642.1 MGP_LPJ_G0029133.1 mouse_genomes_project 4 160108972 160119779 + MGP_LPJ_P0069642 Ccnl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0099484.1 MGP_LPJ_G0037747.1 mouse_genomes_project 4 48033811 48033915 + Gm26424 snRNA snRNA MGP_LPJ_T0068885.1 MGP_LPJ_G0028967.1 mouse_genomes_project 4 144853205 144866164 + MGP_LPJ_P0068885 Agmat protein_coding protein_coding MGP_LPJ_T0064560.1 MGP_LPJ_G0027977.1 mouse_genomes_project 4 8070069 8128453 - MGP_LPJ_P0064560 Esrp1 protein_coding protein_coding MGP_LPJ_T0064561.1 MGP_LPJ_G0027977.1 mouse_genomes_project 4 8070069 8128557 - MGP_LPJ_P0064561 Esrp1 protein_coding protein_coding MGP_LPJ_T0064562.1 MGP_LPJ_G0027977.1 mouse_genomes_project 4 8070174 8128557 - MGP_LPJ_P0064562 Esrp1 protein_coding protein_coding MGP_LPJ_T0064563.1 MGP_LPJ_G0027977.1 mouse_genomes_project 4 8071141 8107368 - MGP_LPJ_P0064563 Esrp1 protein_coding protein_coding MGP_LPJ_T0064564.1 MGP_LPJ_G0027977.1 mouse_genomes_project 4 8071141 8128453 - MGP_LPJ_P0064564 Esrp1 protein_coding protein_coding MGP_LPJ_T0064565.1 MGP_LPJ_G0027977.1 mouse_genomes_project 4 8078745 8082249 - Esrp1 protein_coding processed_transcript MGP_LPJ_T0064566.1 MGP_LPJ_G0027977.1 mouse_genomes_project 4 8095578 8128168 - MGP_LPJ_P0064566 Esrp1 protein_coding protein_coding MGP_LPJ_T0067565.1 MGP_LPJ_G0028677.1 mouse_genomes_project 4 126988218 126997635 - MGP_LPJ_P0067565 Zc3h12a protein_coding protein_coding MGP_LPJ_T0067566.1 MGP_LPJ_G0028677.1 mouse_genomes_project 4 126989888 126992315 - Zc3h12a protein_coding retained_intron MGP_LPJ_T0007889.1 MGP_LPJ_G0006451.1 mouse_genomes_project 4 81686316 81691185 + Gm11412 lincRNA lincRNA MGP_LPJ_T0069060.1 MGP_LPJ_G0029029.1 mouse_genomes_project 4 152248318 152275317 + MGP_LPJ_P0069060 Exosc10 protein_coding protein_coding MGP_LPJ_T0069061.1 MGP_LPJ_G0029029.1 mouse_genomes_project 4 152248320 152275306 + Exosc10 protein_coding processed_transcript MGP_LPJ_T0069062.1 MGP_LPJ_G0029029.1 mouse_genomes_project 4 152248344 152275309 + MGP_LPJ_P0069062 Exosc10 protein_coding nonsense_mediated_decay MGP_LPJ_T0069063.1 MGP_LPJ_G0029029.1 mouse_genomes_project 4 152248351 152275317 + MGP_LPJ_P0069063 Exosc10 protein_coding protein_coding MGP_LPJ_T0069064.1 MGP_LPJ_G0029029.1 mouse_genomes_project 4 152248357 152275318 + MGP_LPJ_P0069064 Exosc10 protein_coding unknown_likely_coding MGP_LPJ_T0069065.1 MGP_LPJ_G0029029.1 mouse_genomes_project 4 152252794 152253885 + MGP_LPJ_P0069065 Exosc10 protein_coding nonsense_mediated_decay MGP_LPJ_T0069066.1 MGP_LPJ_G0029029.1 mouse_genomes_project 4 152257528 152268513 + Exosc10 protein_coding retained_intron MGP_LPJ_T0069067.1 MGP_LPJ_G0029029.1 mouse_genomes_project 4 152259532 152268403 + Exosc10 protein_coding retained_intron MGP_LPJ_T0069068.1 MGP_LPJ_G0029029.1 mouse_genomes_project 4 152268066 152275237 + Exosc10 protein_coding processed_transcript MGP_LPJ_T0065705.1 MGP_LPJ_G0028243.1 mouse_genomes_project 4 57905663 57925774 + MGP_LPJ_P0065705 Zkscan16 protein_coding unknown_likely_coding MGP_LPJ_T0067407.1 MGP_LPJ_G0028629.1 mouse_genomes_project 4 122356124 122372255 - MGP_LPJ_P0067407 Zfp69 protein_coding protein_coding MGP_LPJ_T0067408.1 MGP_LPJ_G0028629.1 mouse_genomes_project 4 122356340 122369992 - MGP_LPJ_P0067408 Zfp69 protein_coding protein_coding MGP_LPJ_T0067409.1 MGP_LPJ_G0028629.1 mouse_genomes_project 4 122357293 122368454 - MGP_LPJ_P0067409 Zfp69 protein_coding protein_coding MGP_LPJ_T0067410.1 MGP_LPJ_G0028629.1 mouse_genomes_project 4 122357294 122360677 - Zfp69 protein_coding retained_intron MGP_LPJ_T0065187.1 MGP_LPJ_G0028121.1 mouse_genomes_project 4 41665197 41666290 - MGP_LPJ_P0065187 Arhgef39 protein_coding protein_coding MGP_LPJ_T0065188.1 MGP_LPJ_G0028121.1 mouse_genomes_project 4 41665197 41668751 - MGP_LPJ_P0065188 Arhgef39 protein_coding protein_coding MGP_LPJ_T0065189.1 MGP_LPJ_G0028121.1 mouse_genomes_project 4 41665201 41668675 - Arhgef39 protein_coding processed_transcript MGP_LPJ_T0065190.1 MGP_LPJ_G0028121.1 mouse_genomes_project 4 41665203 41666269 - Arhgef39 protein_coding processed_transcript MGP_LPJ_T0065191.1 MGP_LPJ_G0028121.1 mouse_genomes_project 4 41665579 41668717 - Arhgef39 protein_coding processed_transcript MGP_LPJ_T0065192.1 MGP_LPJ_G0028121.1 mouse_genomes_project 4 41665876 41668664 - MGP_LPJ_P0065192 Arhgef39 protein_coding protein_coding MGP_LPJ_T0065193.1 MGP_LPJ_G0028121.1 mouse_genomes_project 4 41666275 41668171 - Arhgef39 protein_coding processed_transcript MGP_LPJ_T0065194.1 MGP_LPJ_G0028121.1 mouse_genomes_project 4 41666316 41668131 - Arhgef39 protein_coding processed_transcript MGP_LPJ_T0065195.1 MGP_LPJ_G0028121.1 mouse_genomes_project 4 41666787 41668667 - Arhgef39 protein_coding processed_transcript MGP_LPJ_T0065196.1 MGP_LPJ_G0028121.1 mouse_genomes_project 4 41668202 41668717 - Arhgef39 protein_coding processed_transcript MGP_LPJ_T0065451.1 MGP_LPJ_G0028175.1 mouse_genomes_project 4 44864729 44903603 - MGP_LPJ_P0065451 Trim14 protein_coding nonsense_mediated_decay MGP_LPJ_T0065452.1 MGP_LPJ_G0028175.1 mouse_genomes_project 4 44865767 44901895 - Trim14 protein_coding processed_transcript MGP_LPJ_T0065453.1 MGP_LPJ_G0028175.1 mouse_genomes_project 4 44877861 44903622 - MGP_LPJ_P0065453 Trim14 protein_coding protein_coding MGP_LPJ_T0065454.1 MGP_LPJ_G0028175.1 mouse_genomes_project 4 44878402 44901923 - Trim14 protein_coding processed_transcript MGP_LPJ_T0065455.1 MGP_LPJ_G0028175.1 mouse_genomes_project 4 44880694 44903595 - MGP_LPJ_P0065455 Trim14 protein_coding protein_coding MGP_LPJ_T0065456.1 MGP_LPJ_G0028175.1 mouse_genomes_project 4 44888067 44902085 - Trim14 protein_coding processed_transcript MGP_LPJ_T0014551.1 MGP_LPJ_G0012642.1 mouse_genomes_project 4 72135545 72135877 + processed_pseudogene processed_pseudogene MGP_LPJ_T0064417.1 MGP_LPJ_G0027950.1 mouse_genomes_project 4 367432 371784 - MGP_LPJ_P0064417 Rps20 protein_coding protein_coding MGP_LPJ_T0064418.1 MGP_LPJ_G0027950.1 mouse_genomes_project 4 370582 371352 - Rps20 protein_coding retained_intron MGP_LPJ_T0064419.1 MGP_LPJ_G0027950.1 mouse_genomes_project 4 370585 371607 - Rps20 protein_coding retained_intron MGP_LPJ_T0069108.1 MGP_LPJ_G0029038.1 mouse_genomes_project 4 152881141 152892159 - MGP_LPJ_P0069108 Apitd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0069109.1 MGP_LPJ_G0029038.1 mouse_genomes_project 4 152881289 152892186 - MGP_LPJ_P0069109 Apitd1 protein_coding protein_coding MGP_LPJ_T0069110.1 MGP_LPJ_G0029038.1 mouse_genomes_project 4 152882485 152892180 - MGP_LPJ_P0069110 Apitd1 protein_coding protein_coding MGP_LPJ_T0069111.1 MGP_LPJ_G0029038.1 mouse_genomes_project 4 152882492 152884402 - Apitd1 protein_coding retained_intron MGP_LPJ_T0069112.1 MGP_LPJ_G0029038.1 mouse_genomes_project 4 152882721 152892176 - MGP_LPJ_P0069112 Apitd1 protein_coding protein_coding MGP_LPJ_T0069113.1 MGP_LPJ_G0029038.1 mouse_genomes_project 4 152886153 152892188 - MGP_LPJ_P0069113 Apitd1 protein_coding protein_coding MGP_LPJ_T0068947.1 MGP_LPJ_G0028993.1 mouse_genomes_project 4 147789484 147796975 - MGP_LPJ_P0068947 Gm13125 protein_coding protein_coding MGP_LPJ_T0066276.1 MGP_LPJ_G0028390.1 mouse_genomes_project 4 99457429 99658544 - MGP_LPJ_P0066276 Dock7 protein_coding protein_coding MGP_LPJ_T0066277.1 MGP_LPJ_G0028390.1 mouse_genomes_project 4 99457612 99475312 - Dock7 protein_coding processed_transcript MGP_LPJ_T0066278.1 MGP_LPJ_G0028390.1 mouse_genomes_project 4 99457613 99658403 - MGP_LPJ_P0066278 Dock7 protein_coding protein_coding MGP_LPJ_T0066279.1 MGP_LPJ_G0028390.1 mouse_genomes_project 4 99457615 99658403 - MGP_LPJ_P0066279 Dock7 protein_coding protein_coding MGP_LPJ_T0066280.1 MGP_LPJ_G0028390.1 mouse_genomes_project 4 99457615 99551822 - MGP_LPJ_P0066280 Dock7 protein_coding nonsense_mediated_decay MGP_LPJ_T0066281.1 MGP_LPJ_G0028390.1 mouse_genomes_project 4 99458016 99658403 - MGP_LPJ_P0066281 Dock7 protein_coding protein_coding MGP_LPJ_T0066282.1 MGP_LPJ_G0028390.1 mouse_genomes_project 4 99458016 99551779 - MGP_LPJ_P0066282 Dock7 protein_coding unknown_likely_coding MGP_LPJ_T0066283.1 MGP_LPJ_G0028390.1 mouse_genomes_project 4 99467125 99468078 - Dock7 protein_coding retained_intron MGP_LPJ_T0066284.1 MGP_LPJ_G0028390.1 mouse_genomes_project 4 99467128 99471259 - Dock7 protein_coding retained_intron MGP_LPJ_T0066285.1 MGP_LPJ_G0028390.1 mouse_genomes_project 4 99467530 99477717 - Dock7 protein_coding processed_transcript MGP_LPJ_T0066286.1 MGP_LPJ_G0028390.1 mouse_genomes_project 4 99468435 99480988 - MGP_LPJ_P0066286 Dock7 protein_coding nonsense_mediated_decay MGP_LPJ_T0066287.1 MGP_LPJ_G0028390.1 mouse_genomes_project 4 99478082 99484941 - Dock7 protein_coding retained_intron MGP_LPJ_T0066288.1 MGP_LPJ_G0028390.1 mouse_genomes_project 4 99481857 99483115 - Dock7 protein_coding processed_transcript MGP_LPJ_T0066289.1 MGP_LPJ_G0028390.1 mouse_genomes_project 4 99515741 99535635 - MGP_LPJ_P0066289 Dock7 protein_coding protein_coding MGP_LPJ_T0066290.1 MGP_LPJ_G0028390.1 mouse_genomes_project 4 99517832 99535600 - MGP_LPJ_P0066290 Dock7 protein_coding protein_coding MGP_LPJ_T0066291.1 MGP_LPJ_G0028390.1 mouse_genomes_project 4 99519063 99521458 - Dock7 protein_coding retained_intron MGP_LPJ_T0066292.1 MGP_LPJ_G0028390.1 mouse_genomes_project 4 99527962 99534810 - Dock7 protein_coding processed_transcript MGP_LPJ_T0066293.1 MGP_LPJ_G0028390.1 mouse_genomes_project 4 99534270 99584799 - MGP_LPJ_P0066293 Dock7 protein_coding nonsense_mediated_decay MGP_LPJ_T0066297.1 MGP_LPJ_G0028390.1 mouse_genomes_project 4 99593208 99596570 - Dock7 protein_coding retained_intron MGP_LPJ_T0068896.1 MGP_LPJ_G0028971.1 mouse_genomes_project 4 144923135 144956680 - MGP_LPJ_P0068896 Ctrc protein_coding nonsense_mediated_decay MGP_LPJ_T0068898.1 MGP_LPJ_G0028971.1 mouse_genomes_project 4 144948788 144956774 - Ctrc protein_coding processed_transcript MGP_LPJ_T0068899.1 MGP_LPJ_G0028971.1 mouse_genomes_project 4 144948788 144956700 - MGP_LPJ_P0068899 Ctrc protein_coding protein_coding MGP_LPJ_T0068900.1 MGP_LPJ_G0028971.1 mouse_genomes_project 4 144948793 144956776 - MGP_LPJ_P0068900 Ctrc protein_coding protein_coding MGP_LPJ_T0068901.1 MGP_LPJ_G0028971.1 mouse_genomes_project 4 144955233 144955627 - Ctrc protein_coding processed_transcript MGP_LPJ_T0068641.1 MGP_LPJ_G0028904.1 mouse_genomes_project 4 141118940 141132756 - MGP_LPJ_P0068641 Pink1 protein_coding protein_coding MGP_LPJ_T0068642.1 MGP_LPJ_G0028904.1 mouse_genomes_project 4 141119454 141132777 - MGP_LPJ_P0068642 Pink1 protein_coding protein_coding MGP_LPJ_T0014733.1 MGP_LPJ_G0012824.1 mouse_genomes_project 4 134375570 134375978 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099545.1 MGP_LPJ_G0037808.1 mouse_genomes_project 4 154208254 154208364 + Gm23209 snRNA snRNA MGP_LPJ_T0100814.1 MGP_LPJ_G0039077.1 mouse_genomes_project 4 139708195 139708324 + Gm23834 snoRNA snoRNA MGP_LPJ_T0065538.1 MGP_LPJ_G0028199.1 mouse_genomes_project 4 48097610 48109474 - MGP_LPJ_P0065538 Aldob protein_coding unknown_likely_coding MGP_LPJ_T0065539.1 MGP_LPJ_G0028199.1 mouse_genomes_project 4 48097851 48099688 - Aldob protein_coding processed_transcript MGP_LPJ_T0065540.1 MGP_LPJ_G0028199.1 mouse_genomes_project 4 48099358 48100720 - Aldob protein_coding processed_transcript MGP_LPJ_T0065274.1 MGP_LPJ_G0028140.1 mouse_genomes_project 4 42055231 42060261 + MGP_LPJ_P0065274 Olfr155 protein_coding protein_coding MGP_LPJ_T0065275.1 MGP_LPJ_G0028140.1 mouse_genomes_project 4 42059282 42060454 + MGP_LPJ_P0065275 Olfr155 protein_coding protein_coding MGP_LPJ_T0064788.1 MGP_LPJ_G0028037.1 mouse_genomes_project 4 30366983 30430238 - MGP_LPJ_P0064788 Ankrd6 protein_coding unknown_likely_coding MGP_LPJ_T0064789.1 MGP_LPJ_G0028037.1 mouse_genomes_project 4 30366990 30522453 - MGP_LPJ_P0064789 Ankrd6 protein_coding protein_coding MGP_LPJ_T0064790.1 MGP_LPJ_G0028037.1 mouse_genomes_project 4 30368695 30426484 - MGP_LPJ_P0064790 Ankrd6 protein_coding protein_coding MGP_LPJ_T0064791.1 MGP_LPJ_G0028037.1 mouse_genomes_project 4 30384894 30386425 - Ankrd6 protein_coding processed_transcript MGP_LPJ_T0064792.1 MGP_LPJ_G0028037.1 mouse_genomes_project 4 30388087 30489914 - Ankrd6 protein_coding processed_transcript MGP_LPJ_T0064793.1 MGP_LPJ_G0028037.1 mouse_genomes_project 4 30390726 30426725 - Ankrd6 protein_coding processed_transcript MGP_LPJ_T0068321.1 MGP_LPJ_G0028833.1 mouse_genomes_project 4 136753977 136769885 + MGP_LPJ_P0068321 Trim63 protein_coding protein_coding MGP_LPJ_T0068322.1 MGP_LPJ_G0028833.1 mouse_genomes_project 4 136753979 136769863 + MGP_LPJ_P0068322 Trim63 protein_coding protein_coding MGP_LPJ_T0068323.1 MGP_LPJ_G0028833.1 mouse_genomes_project 4 136754069 136756235 + Trim63 protein_coding retained_intron MGP_LPJ_T0068324.1 MGP_LPJ_G0028833.1 mouse_genomes_project 4 136758845 136769882 + Trim63 protein_coding processed_transcript MGP_LPJ_T0066008.1 MGP_LPJ_G0028320.1 mouse_genomes_project 4 84260589 84667144 - MGP_LPJ_P0066008 Bnc2 protein_coding protein_coding MGP_LPJ_T0066009.1 MGP_LPJ_G0028320.1 mouse_genomes_project 4 84260723 84667177 - MGP_LPJ_P0066009 Bnc2 protein_coding protein_coding MGP_LPJ_T0066010.1 MGP_LPJ_G0028320.1 mouse_genomes_project 4 84260846 84667385 - MGP_LPJ_P0066010 Bnc2 protein_coding protein_coding MGP_LPJ_T0066011.1 MGP_LPJ_G0028320.1 mouse_genomes_project 4 84260874 84277241 - MGP_LPJ_P0066011 Bnc2 protein_coding protein_coding MGP_LPJ_T0066012.1 MGP_LPJ_G0028320.1 mouse_genomes_project 4 84261104 84667196 - MGP_LPJ_P0066012 Bnc2 protein_coding protein_coding MGP_LPJ_T0066013.1 MGP_LPJ_G0028320.1 mouse_genomes_project 4 84261653 84277414 - MGP_LPJ_P0066013 Bnc2 protein_coding protein_coding MGP_LPJ_T0066014.1 MGP_LPJ_G0028320.1 mouse_genomes_project 4 84261739 84277630 - MGP_LPJ_P0066014 Bnc2 protein_coding protein_coding MGP_LPJ_T0066015.1 MGP_LPJ_G0028320.1 mouse_genomes_project 4 84261938 84277352 - MGP_LPJ_P0066015 Bnc2 protein_coding protein_coding MGP_LPJ_T0066016.1 MGP_LPJ_G0028320.1 mouse_genomes_project 4 84261938 84277352 - MGP_LPJ_P0066016 Bnc2 protein_coding protein_coding MGP_LPJ_T0066017.1 MGP_LPJ_G0028320.1 mouse_genomes_project 4 84278697 84667106 - MGP_LPJ_P0066017 Bnc2 protein_coding protein_coding MGP_LPJ_T0066018.1 MGP_LPJ_G0028320.1 mouse_genomes_project 4 84278697 84667106 - MGP_LPJ_P0066018 Bnc2 protein_coding protein_coding MGP_LPJ_T0066019.1 MGP_LPJ_G0028320.1 mouse_genomes_project 4 84278721 84497601 - Bnc2 protein_coding processed_transcript MGP_LPJ_T0066020.1 MGP_LPJ_G0028320.1 mouse_genomes_project 4 84279060 84667137 - MGP_LPJ_P0066020 Bnc2 protein_coding protein_coding MGP_LPJ_T0066021.1 MGP_LPJ_G0028320.1 mouse_genomes_project 4 84279087 84667107 - MGP_LPJ_P0066021 Bnc2 protein_coding protein_coding MGP_LPJ_T0066022.1 MGP_LPJ_G0028320.1 mouse_genomes_project 4 84279118 84525538 - Bnc2 protein_coding processed_transcript MGP_LPJ_T0066023.1 MGP_LPJ_G0028320.1 mouse_genomes_project 4 84376557 84667109 - Bnc2 protein_coding retained_intron MGP_LPJ_T0066024.1 MGP_LPJ_G0028320.1 mouse_genomes_project 4 84378801 84667107 - MGP_LPJ_P0066024 Bnc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0066025.1 MGP_LPJ_G0028320.1 mouse_genomes_project 4 84378833 84538744 - Bnc2 protein_coding processed_transcript MGP_LPJ_T0066026.1 MGP_LPJ_G0028320.1 mouse_genomes_project 4 84378926 84667188 - MGP_LPJ_P0066026 Bnc2 protein_coding protein_coding MGP_LPJ_T0066027.1 MGP_LPJ_G0028320.1 mouse_genomes_project 4 84398950 84538415 - MGP_LPJ_P0066027 Bnc2 protein_coding protein_coding MGP_LPJ_T0066028.1 MGP_LPJ_G0028320.1 mouse_genomes_project 4 84398975 84516002 - Bnc2 protein_coding processed_transcript MGP_LPJ_T0066029.1 MGP_LPJ_G0028320.1 mouse_genomes_project 4 84538336 84667109 - MGP_LPJ_P0066029 Bnc2 protein_coding protein_coding MGP_LPJ_T0004492.1 MGP_LPJ_G0003915.1 mouse_genomes_project 4 83338949 83355002 - Gm11413 antisense antisense MGP_LPJ_T0011579.1 MGP_LPJ_G0009697.1 mouse_genomes_project 4 46045655 46045775 + Gm27668 misc_RNA misc_RNA MGP_LPJ_T0069592.1 MGP_LPJ_G0029121.1 mouse_genomes_project 4 159880506 159911859 - MGP_LPJ_P0069592 Gm10563 protein_coding protein_coding MGP_LPJ_T0068711.1 MGP_LPJ_G0028926.1 mouse_genomes_project 4 142251700 142255529 - Mrto4 protein_coding processed_transcript MGP_LPJ_T0068712.1 MGP_LPJ_G0028926.1 mouse_genomes_project 4 142251700 142258502 - MGP_LPJ_P0068712 Mrto4 protein_coding protein_coding MGP_LPJ_T0068713.1 MGP_LPJ_G0028926.1 mouse_genomes_project 4 142251710 142258224 - MGP_LPJ_P0068713 Mrto4 protein_coding protein_coding MGP_LPJ_T0068714.1 MGP_LPJ_G0028926.1 mouse_genomes_project 4 142254087 142255547 - Mrto4 protein_coding retained_intron MGP_LPJ_T0068715.1 MGP_LPJ_G0028926.1 mouse_genomes_project 4 142254623 142258237 - MGP_LPJ_P0068715 Mrto4 protein_coding protein_coding MGP_LPJ_T0068716.1 MGP_LPJ_G0028926.1 mouse_genomes_project 4 142254685 142258459 - Mrto4 protein_coding retained_intron MGP_LPJ_T0068717.1 MGP_LPJ_G0028926.1 mouse_genomes_project 4 142255800 142258236 - Mrto4 protein_coding retained_intron MGP_LPJ_T0066851.1 MGP_LPJ_G0028503.1 mouse_genomes_project 4 115778310 115816734 + MGP_LPJ_P0066851 Gm12830 protein_coding protein_coding MGP_LPJ_T0064664.1 MGP_LPJ_G0028013.1 mouse_genomes_project 4 18768328 18776784 - Prdm13 protein_coding processed_transcript MGP_LPJ_T0064665.1 MGP_LPJ_G0028013.1 mouse_genomes_project 4 18768329 18776784 - MGP_LPJ_P0064665 Prdm13 protein_coding protein_coding MGP_LPJ_T0064666.1 MGP_LPJ_G0028013.1 mouse_genomes_project 4 18768329 18776604 - MGP_LPJ_P0064666 Prdm13 protein_coding protein_coding MGP_LPJ_T0064667.1 MGP_LPJ_G0028013.1 mouse_genomes_project 4 18770513 18776604 - Prdm13 protein_coding processed_transcript MGP_LPJ_T0064668.1 MGP_LPJ_G0028013.1 mouse_genomes_project 4 18770595 18776602 - Prdm13 protein_coding processed_transcript MGP_LPJ_T0064669.1 MGP_LPJ_G0028013.1 mouse_genomes_project 4 18773128 18776666 - Prdm13 protein_coding retained_intron MGP_LPJ_T0066074.1 MGP_LPJ_G0028330.1 mouse_genomes_project 4 87003044 87048025 + MGP_LPJ_P0066074 Acer2 protein_coding protein_coding MGP_LPJ_T0066075.1 MGP_LPJ_G0028330.1 mouse_genomes_project 4 87003062 87061856 + Acer2 protein_coding processed_transcript MGP_LPJ_T0066076.1 MGP_LPJ_G0028330.1 mouse_genomes_project 4 87003062 87048025 + MGP_LPJ_P0066076 Acer2 protein_coding protein_coding MGP_LPJ_T0066077.1 MGP_LPJ_G0028330.1 mouse_genomes_project 4 87058726 87064186 + Acer2 protein_coding processed_transcript MGP_LPJ_T0014726.1 MGP_LPJ_G0012817.1 mouse_genomes_project 4 129056563 129058321 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007864.1 MGP_LPJ_G0006429.1 mouse_genomes_project 4 53415762 53447318 + Gm12478 lincRNA lincRNA MGP_LPJ_T0007806.1 MGP_LPJ_G0006381.1 mouse_genomes_project 4 172868 179545 + 2210414B05Rik lincRNA lincRNA MGP_LPJ_T0065965.1 MGP_LPJ_G0028313.1 mouse_genomes_project 4 82710755 82780282 - MGP_LPJ_P0065965 Zdhhc21 protein_coding protein_coding MGP_LPJ_T0065966.1 MGP_LPJ_G0028313.1 mouse_genomes_project 4 82716044 82780170 - MGP_LPJ_P0065966 Zdhhc21 protein_coding nonsense_mediated_decay MGP_LPJ_T0065967.1 MGP_LPJ_G0028313.1 mouse_genomes_project 4 82718206 82780567 - MGP_LPJ_P0065967 Zdhhc21 protein_coding protein_coding MGP_LPJ_T0065968.1 MGP_LPJ_G0028313.1 mouse_genomes_project 4 82754967 82769280 - MGP_LPJ_P0065968 Zdhhc21 protein_coding protein_coding MGP_LPJ_T0065969.1 MGP_LPJ_G0028313.1 mouse_genomes_project 4 82757706 82780163 - Zdhhc21 protein_coding retained_intron MGP_LPJ_T0065970.1 MGP_LPJ_G0028313.1 mouse_genomes_project 4 82766078 82780182 - MGP_LPJ_P0065970 Zdhhc21 protein_coding protein_coding MGP_LPJ_T0064447.1 MGP_LPJ_G0027958.1 mouse_genomes_project 4 2217624 2371083 + Fam110b protein_coding processed_transcript MGP_LPJ_T0064448.1 MGP_LPJ_G0027958.1 mouse_genomes_project 4 2217655 2373802 + MGP_LPJ_P0064448 Fam110b protein_coding protein_coding MGP_LPJ_T0064449.1 MGP_LPJ_G0027958.1 mouse_genomes_project 4 2217659 2307670 + Fam110b protein_coding retained_intron MGP_LPJ_T0064450.1 MGP_LPJ_G0027958.1 mouse_genomes_project 4 2217724 2371195 + Fam110b protein_coding processed_transcript MGP_LPJ_T0064451.1 MGP_LPJ_G0027958.1 mouse_genomes_project 4 2217769 2686817 + Fam110b protein_coding processed_transcript MGP_LPJ_T0064452.1 MGP_LPJ_G0027958.1 mouse_genomes_project 4 2294279 2373802 + MGP_LPJ_P0064452 Fam110b protein_coding protein_coding MGP_LPJ_T0064453.1 MGP_LPJ_G0027958.1 mouse_genomes_project 4 2341033 2371546 + MGP_LPJ_P0064453 Fam110b protein_coding protein_coding MGP_LPJ_T0064454.1 MGP_LPJ_G0027958.1 mouse_genomes_project 4 2341033 2372647 + MGP_LPJ_P0064454 Fam110b protein_coding protein_coding MGP_LPJ_T0064455.1 MGP_LPJ_G0027958.1 mouse_genomes_project 4 2370784 2371232 + Fam110b protein_coding processed_transcript MGP_LPJ_T0067509.1 MGP_LPJ_G0028661.1 mouse_genomes_project 4 126447496 126448369 - MGP_LPJ_P0067509 3100002H09Rik protein_coding protein_coding MGP_LPJ_T0014708.1 MGP_LPJ_G0012799.1 mouse_genomes_project 4 123060187 123060519 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098602.1 MGP_LPJ_G0036876.1 mouse_genomes_project 4 100671608 100672829 + Gm12701 sense_intronic sense_intronic MGP_LPJ_T0102152.1 MGP_LPJ_G0040189.1 mouse_genomes_project 4 116118469 116131179 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0014559.1 MGP_LPJ_G0012650.1 mouse_genomes_project 4 74344037 74345108 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065164.1 MGP_LPJ_G0028117.1 mouse_genomes_project 4 41609951 41616077 + MGP_LPJ_P0065164 Tesk1 protein_coding protein_coding MGP_LPJ_T0065165.1 MGP_LPJ_G0028117.1 mouse_genomes_project 4 41611333 41615807 + MGP_LPJ_P0065165 Tesk1 protein_coding nonsense_mediated_decay MGP_LPJ_T0065166.1 MGP_LPJ_G0028117.1 mouse_genomes_project 4 41612587 41613393 + Tesk1 protein_coding retained_intron MGP_LPJ_T0065167.1 MGP_LPJ_G0028117.1 mouse_genomes_project 4 41612720 41613830 + Tesk1 protein_coding retained_intron MGP_LPJ_T0065168.1 MGP_LPJ_G0028117.1 mouse_genomes_project 4 41612962 41614024 + Tesk1 protein_coding retained_intron MGP_LPJ_T0014587.1 MGP_LPJ_G0012678.1 mouse_genomes_project 4 84691244 84692292 + processed_pseudogene processed_pseudogene MGP_LPJ_T0065579.1 MGP_LPJ_G0028212.1 mouse_genomes_project 4 51732489 51742672 + MGP_LPJ_P0065579 Nipsnap3b protein_coding protein_coding MGP_LPJ_T0065580.1 MGP_LPJ_G0028212.1 mouse_genomes_project 4 51732559 51742188 + MGP_LPJ_P0065580 Nipsnap3b protein_coding protein_coding MGP_LPJ_T0065581.1 MGP_LPJ_G0028212.1 mouse_genomes_project 4 51741587 51742117 + Nipsnap3b protein_coding processed_transcript MGP_LPJ_T0099477.1 MGP_LPJ_G0037740.1 mouse_genomes_project 4 39169340 39169443 - Gm24650 snRNA snRNA MGP_LPJ_T0007980.1 MGP_LPJ_G0006519.1 mouse_genomes_project 4 132177222 132180152 + E330017L17Rik lincRNA lincRNA MGP_LPJ_T0007981.1 MGP_LPJ_G0006519.1 mouse_genomes_project 4 132177232 132180017 + E330017L17Rik lincRNA lincRNA MGP_LPJ_T0007982.1 MGP_LPJ_G0006519.1 mouse_genomes_project 4 132177264 132179772 + E330017L17Rik lincRNA lincRNA MGP_LPJ_T0007983.1 MGP_LPJ_G0006519.1 mouse_genomes_project 4 132177439 132190610 + E330017L17Rik lincRNA lincRNA MGP_LPJ_T0014507.1 MGP_LPJ_G0012598.1 mouse_genomes_project 4 51535786 51536407 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014368.1 MGP_LPJ_G0012459.1 mouse_genomes_project 4 8166522 8166937 - processed_pseudogene processed_pseudogene MGP_LPJ_T0068925.1 MGP_LPJ_G0028977.1 mouse_genomes_project 4 146507049 146550480 - MGP_LPJ_P0068925 Pdpn protein_coding protein_coding MGP_LPJ_T0068926.1 MGP_LPJ_G0028977.1 mouse_genomes_project 4 146507963 146550379 - MGP_LPJ_P0068926 Pdpn protein_coding protein_coding MGP_LPJ_T0008013.1 MGP_LPJ_G0006537.1 mouse_genomes_project 4 138983829 138985477 - Gm27022 lincRNA lincRNA MGP_LPJ_T0064588.1 MGP_LPJ_G0027984.1 mouse_genomes_project 4 8764426 8766124 - MGP_LPJ_P0064588 Gm10604 protein_coding protein_coding MGP_LPJ_T0014369.1 MGP_LPJ_G0012460.1 mouse_genomes_project 4 8409672 8410525 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065770.1 MGP_LPJ_G0028265.1 mouse_genomes_project 4 61694138 61701941 - MGP_LPJ_P0065770 Rnf183 protein_coding protein_coding MGP_LPJ_T0065771.1 MGP_LPJ_G0028265.1 mouse_genomes_project 4 61694140 61701337 - MGP_LPJ_P0065771 Rnf183 protein_coding protein_coding MGP_LPJ_T0065772.1 MGP_LPJ_G0028265.1 mouse_genomes_project 4 61694585 61695158 - MGP_LPJ_P0065772 Rnf183 protein_coding protein_coding MGP_LPJ_T0067438.1 MGP_LPJ_G0028641.1 mouse_genomes_project 4 124607000 124624799 - Mfsd2a protein_coding processed_transcript MGP_LPJ_T0067439.1 MGP_LPJ_G0028641.1 mouse_genomes_project 4 124607000 124624835 - MGP_LPJ_P0067439 Mfsd2a protein_coding protein_coding MGP_LPJ_T0067440.1 MGP_LPJ_G0028641.1 mouse_genomes_project 4 124620377 124623637 - Mfsd2a protein_coding processed_transcript MGP_LPJ_T0067441.1 MGP_LPJ_G0028641.1 mouse_genomes_project 4 124620404 124624835 - MGP_LPJ_P0067441 Mfsd2a protein_coding protein_coding MGP_LPJ_T0014429.1 MGP_LPJ_G0012520.1 mouse_genomes_project 4 25774312 25775319 + processed_pseudogene processed_pseudogene MGP_LPJ_T0066298.1 MGP_LPJ_G0028392.1 mouse_genomes_project 4 99732286 99799685 + MGP_LPJ_P0066298 Atg4c protein_coding protein_coding MGP_LPJ_T0066299.1 MGP_LPJ_G0028392.1 mouse_genomes_project 4 99732499 99799681 + MGP_LPJ_P0066299 Atg4c protein_coding protein_coding MGP_LPJ_T0066300.1 MGP_LPJ_G0028392.1 mouse_genomes_project 4 99756257 99762210 + Atg4c protein_coding processed_transcript MGP_LPJ_T0098421.1 MGP_LPJ_G0036702.1 mouse_genomes_project 4 135178328 135178493 - Gm22767 scaRNA scaRNA MGP_LPJ_T0007995.1 MGP_LPJ_G0006528.1 mouse_genomes_project 4 134329554 134330338 + Gm13063 lincRNA lincRNA MGP_LPJ_T0068407.1 MGP_LPJ_G0028852.1 mouse_genomes_project 4 137909853 137937733 - MGP_LPJ_P0068407 Ncmap protein_coding protein_coding MGP_LPJ_T0068408.1 MGP_LPJ_G0028852.1 mouse_genomes_project 4 137909853 137925200 - MGP_LPJ_P0068408 Ncmap protein_coding protein_coding MGP_LPJ_T0068409.1 MGP_LPJ_G0028852.1 mouse_genomes_project 4 137909853 137937702 - MGP_LPJ_P0068409 Ncmap protein_coding protein_coding MGP_LPJ_T0068410.1 MGP_LPJ_G0028852.1 mouse_genomes_project 4 137909854 137925217 - MGP_LPJ_P0068410 Ncmap protein_coding protein_coding MGP_LPJ_T0068411.1 MGP_LPJ_G0028852.1 mouse_genomes_project 4 137910512 137925190 - MGP_LPJ_P0068411 Ncmap protein_coding protein_coding MGP_LPJ_T0068412.1 MGP_LPJ_G0028852.1 mouse_genomes_project 4 137910802 137914860 - Ncmap protein_coding processed_transcript MGP_LPJ_T0068413.1 MGP_LPJ_G0028852.1 mouse_genomes_project 4 137910937 137925217 - MGP_LPJ_P0068413 Ncmap protein_coding protein_coding MGP_LPJ_T0068414.1 MGP_LPJ_G0028852.1 mouse_genomes_project 4 137912212 137937739 - MGP_LPJ_P0068414 Ncmap protein_coding protein_coding MGP_LPJ_T0067873.1 MGP_LPJ_G0028744.1 mouse_genomes_project 4 131827083 131832995 - MGP_LPJ_P0067873 Dcdc2b protein_coding protein_coding MGP_LPJ_T0067874.1 MGP_LPJ_G0028744.1 mouse_genomes_project 4 131827281 131828001 - Dcdc2b protein_coding retained_intron MGP_LPJ_T0067875.1 MGP_LPJ_G0028744.1 mouse_genomes_project 4 131827500 131832992 - MGP_LPJ_P0067875 Dcdc2b protein_coding protein_coding MGP_LPJ_T0014474.1 MGP_LPJ_G0012565.1 mouse_genomes_project 4 38670361 38670758 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065629.1 MGP_LPJ_G0028227.1 mouse_genomes_project 4 55674575 55733044 - MGP_LPJ_P0065629 Ctnnal1 protein_coding protein_coding MGP_LPJ_T0065630.1 MGP_LPJ_G0028227.1 mouse_genomes_project 4 55675780 55677959 - Ctnnal1 protein_coding processed_transcript MGP_LPJ_T0065631.1 MGP_LPJ_G0028227.1 mouse_genomes_project 4 55680627 55681295 - Ctnnal1 protein_coding processed_transcript MGP_LPJ_T0065632.1 MGP_LPJ_G0028227.1 mouse_genomes_project 4 55687664 55704406 - Ctnnal1 protein_coding processed_transcript MGP_LPJ_T0065633.1 MGP_LPJ_G0028227.1 mouse_genomes_project 4 55689609 55733024 - Ctnnal1 protein_coding processed_transcript MGP_LPJ_T0065634.1 MGP_LPJ_G0028227.1 mouse_genomes_project 4 55689872 55693455 - Ctnnal1 protein_coding processed_transcript MGP_LPJ_T0065635.1 MGP_LPJ_G0028227.1 mouse_genomes_project 4 55693126 55703354 - Ctnnal1 protein_coding processed_transcript MGP_LPJ_T0065636.1 MGP_LPJ_G0028227.1 mouse_genomes_project 4 55707493 55733010 - MGP_LPJ_P0065636 Ctnnal1 protein_coding protein_coding MGP_LPJ_T0065637.1 MGP_LPJ_G0028227.1 mouse_genomes_project 4 55711461 55713063 - Ctnnal1 protein_coding processed_transcript MGP_LPJ_T0102166.1 MGP_LPJ_G0040203.1 mouse_genomes_project 4 142245605 142246756 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0017971.1 MGP_LPJ_G0015448.1 mouse_genomes_project 4 6414903 6474760 + 4930412C18Rik processed_transcript processed_transcript MGP_LPJ_T0017972.1 MGP_LPJ_G0015448.1 mouse_genomes_project 4 6414903 6473299 + 4930412C18Rik processed_transcript processed_transcript MGP_LPJ_T0017973.1 MGP_LPJ_G0015448.1 mouse_genomes_project 4 6414969 6422823 + 4930412C18Rik processed_transcript processed_transcript MGP_LPJ_T0017974.1 MGP_LPJ_G0015448.1 mouse_genomes_project 4 6414997 6428353 + 4930412C18Rik processed_transcript processed_transcript MGP_LPJ_T0017975.1 MGP_LPJ_G0015448.1 mouse_genomes_project 4 6415115 6471634 + 4930412C18Rik processed_transcript processed_transcript MGP_LPJ_T0014524.1 MGP_LPJ_G0012615.1 mouse_genomes_project 4 55244066 55244848 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014612.1 MGP_LPJ_G0012703.1 mouse_genomes_project 4 93953276 93953586 + processed_pseudogene processed_pseudogene MGP_LPJ_T0069302.1 MGP_LPJ_G0029074.1 mouse_genomes_project 4 156102456 156130970 + MGP_LPJ_P0069302 Plekhg5 protein_coding protein_coding MGP_LPJ_T0069303.1 MGP_LPJ_G0029074.1 mouse_genomes_project 4 156112206 156130974 + MGP_LPJ_P0069303 Plekhg5 protein_coding protein_coding MGP_LPJ_T0069304.1 MGP_LPJ_G0029074.1 mouse_genomes_project 4 156112206 156130964 + MGP_LPJ_P0069304 Plekhg5 protein_coding protein_coding MGP_LPJ_T0069305.1 MGP_LPJ_G0029074.1 mouse_genomes_project 4 156119971 156121665 + Plekhg5 protein_coding retained_intron MGP_LPJ_T0069306.1 MGP_LPJ_G0029074.1 mouse_genomes_project 4 156123209 156130968 + Plekhg5 protein_coding retained_intron MGP_LPJ_T0069307.1 MGP_LPJ_G0029074.1 mouse_genomes_project 4 156123302 156123783 + Plekhg5 protein_coding retained_intron MGP_LPJ_T0007882.1 MGP_LPJ_G0006444.1 mouse_genomes_project 4 62950022 62954952 + Gm11482 lincRNA lincRNA MGP_LPJ_T0014449.1 MGP_LPJ_G0012540.1 mouse_genomes_project 4 30795755 30795945 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010605.1 MGP_LPJ_G0008723.1 mouse_genomes_project 4 38678181 38678260 + Mir207 miRNA miRNA MGP_LPJ_T0007862.1 MGP_LPJ_G0006427.1 mouse_genomes_project 4 52934115 52934613 - lincRNA lincRNA MGP_LPJ_T0014777.1 MGP_LPJ_G0012868.1 mouse_genomes_project 4 152848060 152848380 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010626.1 MGP_LPJ_G0008744.1 mouse_genomes_project 4 99035623 99035749 - Gm22625 miRNA miRNA MGP_LPJ_T0101338.1 MGP_LPJ_G0039546.1 mouse_genomes_project 4 6574157 6575590 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101339.1 MGP_LPJ_G0039546.1 mouse_genomes_project 4 6574830 6575828 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0014675.1 MGP_LPJ_G0012766.1 mouse_genomes_project 4 116736560 116737652 + processed_pseudogene processed_pseudogene MGP_LPJ_T0018008.1 MGP_LPJ_G0015470.1 mouse_genomes_project 4 89326216 89353082 - Gm12602 processed_transcript processed_transcript MGP_LPJ_T0018009.1 MGP_LPJ_G0015470.1 mouse_genomes_project 4 89348769 89353037 - Gm12602 processed_transcript processed_transcript MGP_LPJ_T0014516.1 MGP_LPJ_G0012607.1 mouse_genomes_project 4 53905403 53905764 + processed_pseudogene processed_pseudogene MGP_LPJ_T0068480.1 MGP_LPJ_G0028869.1 mouse_genomes_project 4 138626847 138627376 - protein_coding processed_transcript MGP_LPJ_T0068481.1 MGP_LPJ_G0028869.1 mouse_genomes_project 4 138626847 138657489 - protein_coding processed_transcript MGP_LPJ_T0068482.1 MGP_LPJ_G0028869.1 mouse_genomes_project 4 138652791 138658198 - MGP_LPJ_P0068482 protein_coding protein_coding MGP_LPJ_T0068483.1 MGP_LPJ_G0028869.1 mouse_genomes_project 4 138653007 138653583 - protein_coding processed_transcript MGP_LPJ_T0068484.1 MGP_LPJ_G0028869.1 mouse_genomes_project 4 138653050 138657800 - protein_coding processed_transcript MGP_LPJ_T0068485.1 MGP_LPJ_G0028869.1 mouse_genomes_project 4 138653340 138657894 - MGP_LPJ_P0068485 protein_coding protein_coding MGP_LPJ_T0068486.1 MGP_LPJ_G0028869.1 mouse_genomes_project 4 138653392 138657558 - protein_coding processed_transcript MGP_LPJ_T0068487.1 MGP_LPJ_G0028869.1 mouse_genomes_project 4 138653689 138657510 - protein_coding processed_transcript MGP_LPJ_T0068488.1 MGP_LPJ_G0028869.1 mouse_genomes_project 4 138654085 138657520 - protein_coding processed_transcript MGP_LPJ_T0068489.1 MGP_LPJ_G0028869.1 mouse_genomes_project 4 138654298 138658233 - protein_coding processed_transcript MGP_LPJ_T0004572.1 MGP_LPJ_G0003972.1 mouse_genomes_project 4 135853776 135856955 - Gm13257 antisense antisense MGP_LPJ_T0067113.1 MGP_LPJ_G0028562.1 mouse_genomes_project 4 118400573 118417761 + MGP_LPJ_P0067113 Tmem53 protein_coding protein_coding MGP_LPJ_T0067114.1 MGP_LPJ_G0028562.1 mouse_genomes_project 4 118400662 118417695 + MGP_LPJ_P0067114 Tmem53 protein_coding protein_coding MGP_LPJ_T0067115.1 MGP_LPJ_G0028562.1 mouse_genomes_project 4 118400664 118417763 + MGP_LPJ_P0067115 Tmem53 protein_coding protein_coding MGP_LPJ_T0067116.1 MGP_LPJ_G0028562.1 mouse_genomes_project 4 118400684 118417077 + Tmem53 protein_coding processed_transcript MGP_LPJ_T0067117.1 MGP_LPJ_G0028562.1 mouse_genomes_project 4 118400962 118417761 + MGP_LPJ_P0067117 Tmem53 protein_coding protein_coding MGP_LPJ_T0067118.1 MGP_LPJ_G0028562.1 mouse_genomes_project 4 118414551 118417763 + Tmem53 protein_coding processed_transcript MGP_LPJ_T0014364.1 MGP_LPJ_G0012455.1 mouse_genomes_project 4 7661365 7661851 + processed_pseudogene processed_pseudogene MGP_LPJ_T0065158.1 MGP_LPJ_G0028116.1 mouse_genomes_project 4 41593537 41595653 - MGP_LPJ_P0065158 Fam166b protein_coding protein_coding MGP_LPJ_T0065159.1 MGP_LPJ_G0028116.1 mouse_genomes_project 4 41593594 41595636 - MGP_LPJ_P0065159 Fam166b protein_coding protein_coding MGP_LPJ_T0065160.1 MGP_LPJ_G0028116.1 mouse_genomes_project 4 41593658 41594546 - MGP_LPJ_P0065160 Fam166b protein_coding protein_coding MGP_LPJ_T0065161.1 MGP_LPJ_G0028116.1 mouse_genomes_project 4 41593658 41595608 - MGP_LPJ_P0065161 Fam166b protein_coding protein_coding MGP_LPJ_T0065162.1 MGP_LPJ_G0028116.1 mouse_genomes_project 4 41593701 41595608 - MGP_LPJ_P0065162 Fam166b protein_coding protein_coding MGP_LPJ_T0065163.1 MGP_LPJ_G0028116.1 mouse_genomes_project 4 41594106 41595608 - MGP_LPJ_P0065163 Fam166b protein_coding nonsense_mediated_decay MGP_LPJ_T0068736.1 MGP_LPJ_G0028930.1 mouse_genomes_project 4 142531638 142591297 + MGP_LPJ_P0068736 Gm21969 protein_coding nonsense_mediated_decay MGP_LPJ_T0068547.1 MGP_LPJ_G0028887.1 mouse_genomes_project 4 139661271 139731144 - MGP_LPJ_P0068547 Zbtb40 protein_coding unknown_likely_coding MGP_LPJ_T0068548.1 MGP_LPJ_G0028887.1 mouse_genomes_project 4 139661274 139731049 - MGP_LPJ_P0068548 Zbtb40 protein_coding protein_coding MGP_LPJ_T0068549.1 MGP_LPJ_G0028887.1 mouse_genomes_project 4 139697070 139731155 - Zbtb40 protein_coding retained_intron MGP_LPJ_T0068809.1 MGP_LPJ_G0028948.1 mouse_genomes_project 4 144119391 144151910 + MGP_LPJ_P0068809 Spata21 protein_coding protein_coding MGP_LPJ_T0068810.1 MGP_LPJ_G0028948.1 mouse_genomes_project 4 144138818 144150693 + Spata21 protein_coding retained_intron MGP_LPJ_T0067110.1 MGP_LPJ_G0028561.1 mouse_genomes_project 4 118360630 118400489 - MGP_LPJ_P0067110 Gm1661 protein_coding unknown_likely_coding MGP_LPJ_T0067111.1 MGP_LPJ_G0028561.1 mouse_genomes_project 4 118362402 118400540 - MGP_LPJ_P0067111 Gm1661 protein_coding protein_coding MGP_LPJ_T0067112.1 MGP_LPJ_G0028561.1 mouse_genomes_project 4 118390682 118400748 - Gm1661 protein_coding processed_transcript MGP_LPJ_T0066434.1 MGP_LPJ_G0028423.1 mouse_genomes_project 4 104307483 104871348 + Dab1 protein_coding processed_transcript MGP_LPJ_T0066435.1 MGP_LPJ_G0028423.1 mouse_genomes_project 4 104307789 105397319 + MGP_LPJ_P0066435 Dab1 protein_coding protein_coding MGP_LPJ_T0066436.1 MGP_LPJ_G0028423.1 mouse_genomes_project 4 105064088 105396433 + MGP_LPJ_P0066436 Dab1 protein_coding protein_coding MGP_LPJ_T0066437.1 MGP_LPJ_G0028423.1 mouse_genomes_project 4 105064564 105466515 + MGP_LPJ_P0066437 Dab1 protein_coding protein_coding MGP_LPJ_T0066438.1 MGP_LPJ_G0028423.1 mouse_genomes_project 4 105064564 105463468 + MGP_LPJ_P0066438 Dab1 protein_coding nonsense_mediated_decay MGP_LPJ_T0066439.1 MGP_LPJ_G0028423.1 mouse_genomes_project 4 105214964 105397319 + MGP_LPJ_P0066439 Dab1 protein_coding protein_coding MGP_LPJ_T0066440.1 MGP_LPJ_G0028423.1 mouse_genomes_project 4 105301104 105395729 + Dab1 protein_coding processed_transcript MGP_LPJ_T0066441.1 MGP_LPJ_G0028423.1 mouse_genomes_project 4 105317016 105432541 + MGP_LPJ_P0066441 Dab1 protein_coding protein_coding MGP_LPJ_T0069050.1 MGP_LPJ_G0029025.1 mouse_genomes_project 4 151908488 151958349 - MGP_LPJ_P0069050 Ptchd2 protein_coding protein_coding MGP_LPJ_T0069051.1 MGP_LPJ_G0029025.1 mouse_genomes_project 4 151928683 151931312 - Ptchd2 protein_coding retained_intron MGP_LPJ_T0069052.1 MGP_LPJ_G0029025.1 mouse_genomes_project 4 151930351 151931792 - Ptchd2 protein_coding processed_transcript MGP_LPJ_T0014682.1 MGP_LPJ_G0012773.1 mouse_genomes_project 4 118290659 118290863 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014499.1 MGP_LPJ_G0012590.1 mouse_genomes_project 4 49842075 49842432 + processed_pseudogene processed_pseudogene MGP_LPJ_T0068816.1 MGP_LPJ_G0028950.1 mouse_genomes_project 4 144186289 144246407 + MGP_LPJ_P0068816 Fbxo42 protein_coding protein_coding MGP_LPJ_T0068817.1 MGP_LPJ_G0028950.1 mouse_genomes_project 4 144186298 144237458 + Fbxo42 protein_coding processed_transcript MGP_LPJ_T0064834.1 MGP_LPJ_G0028050.1 mouse_genomes_project 4 32289944 32335133 + MGP_LPJ_P0064834 Rars2 protein_coding protein_coding MGP_LPJ_T0064835.1 MGP_LPJ_G0028050.1 mouse_genomes_project 4 32289948 32293909 + Rars2 protein_coding processed_transcript MGP_LPJ_T0064836.1 MGP_LPJ_G0028050.1 mouse_genomes_project 4 32289956 32300427 + Rars2 protein_coding processed_transcript MGP_LPJ_T0064837.1 MGP_LPJ_G0028050.1 mouse_genomes_project 4 32289961 32335129 + Rars2 protein_coding processed_transcript MGP_LPJ_T0064838.1 MGP_LPJ_G0028050.1 mouse_genomes_project 4 32289963 32305554 + MGP_LPJ_P0064838 Rars2 protein_coding protein_coding MGP_LPJ_T0064839.1 MGP_LPJ_G0028050.1 mouse_genomes_project 4 32289965 32298419 + Rars2 protein_coding processed_transcript MGP_LPJ_T0064840.1 MGP_LPJ_G0028050.1 mouse_genomes_project 4 32322675 32331131 + Rars2 protein_coding processed_transcript MGP_LPJ_T0004468.1 MGP_LPJ_G0003893.1 mouse_genomes_project 4 41816206 41826209 - Gm12473 antisense antisense MGP_LPJ_T0004564.1 MGP_LPJ_G0003966.1 mouse_genomes_project 4 131692538 131711375 - Gm12979 antisense antisense MGP_LPJ_T0010637.1 MGP_LPJ_G0008755.1 mouse_genomes_project 4 122184153 122184245 - Mir30e miRNA miRNA MGP_LPJ_T0064578.1 MGP_LPJ_G0027981.1 mouse_genomes_project 4 8468396 8478668 + MGP_LPJ_P0064578 Gem protein_coding protein_coding MGP_LPJ_T0064579.1 MGP_LPJ_G0027981.1 mouse_genomes_project 4 8469746 8478668 + MGP_LPJ_P0064579 Gem protein_coding protein_coding MGP_LPJ_T0068418.1 MGP_LPJ_G0028854.1 mouse_genomes_project 4 137993245 138037360 - MGP_LPJ_P0068418 Nipal3 protein_coding nonsense_mediated_decay MGP_LPJ_T0068419.1 MGP_LPJ_G0028854.1 mouse_genomes_project 4 137993962 138037360 - MGP_LPJ_P0068419 Nipal3 protein_coding protein_coding MGP_LPJ_T0068420.1 MGP_LPJ_G0028854.1 mouse_genomes_project 4 137996646 138037477 - MGP_LPJ_P0068420 Nipal3 protein_coding protein_coding MGP_LPJ_T0068421.1 MGP_LPJ_G0028854.1 mouse_genomes_project 4 137999635 138015087 - MGP_LPJ_P0068421 Nipal3 protein_coding protein_coding MGP_LPJ_T0068422.1 MGP_LPJ_G0028854.1 mouse_genomes_project 4 137999926 138002810 - Nipal3 protein_coding processed_transcript MGP_LPJ_T0068423.1 MGP_LPJ_G0028854.1 mouse_genomes_project 4 138000016 138003082 - Nipal3 protein_coding processed_transcript MGP_LPJ_T0068424.1 MGP_LPJ_G0028854.1 mouse_genomes_project 4 138021424 138037822 - MGP_LPJ_P0068424 Nipal3 protein_coding protein_coding MGP_LPJ_T0068425.1 MGP_LPJ_G0028854.1 mouse_genomes_project 4 138024338 138037891 - MGP_LPJ_P0068425 Nipal3 protein_coding protein_coding MGP_LPJ_T0067616.1 MGP_LPJ_G0028688.1 mouse_genomes_project 4 128219782 128234567 + MGP_LPJ_P0067616 Trappc3 protein_coding protein_coding MGP_LPJ_T0067617.1 MGP_LPJ_G0028688.1 mouse_genomes_project 4 128219857 128230953 + Trappc3 protein_coding processed_transcript MGP_LPJ_T0064482.1 MGP_LPJ_G0027964.1 mouse_genomes_project 4 4746035 4844705 - MGP_LPJ_P0064482 Car8 protein_coding protein_coding MGP_LPJ_T0068546.1 MGP_LPJ_G0028886.1 mouse_genomes_project 4 139609793 139636946 - MGP_LPJ_P0068546 Epha8 protein_coding protein_coding MGP_LPJ_T0069519.1 MGP_LPJ_G0029110.1 mouse_genomes_project 4 159289918 159301959 - Rer1 protein_coding processed_transcript MGP_LPJ_T0069520.1 MGP_LPJ_G0029110.1 mouse_genomes_project 4 159289918 159301961 - MGP_LPJ_P0069520 Rer1 protein_coding protein_coding MGP_LPJ_T0069521.1 MGP_LPJ_G0029110.1 mouse_genomes_project 4 159298273 159301970 - Rer1 protein_coding processed_transcript MGP_LPJ_T0011596.1 MGP_LPJ_G0009714.1 mouse_genomes_project 4 122569715 122570034 + Gm22982 misc_RNA misc_RNA MGP_LPJ_T0065912.1 MGP_LPJ_G0028304.1 mouse_genomes_project 4 74963168 74964120 - MGP_LPJ_P0065912 Tmem261 protein_coding protein_coding MGP_LPJ_T0102164.1 MGP_LPJ_G0040201.1 mouse_genomes_project 4 124383819 124388304 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0066565.1 MGP_LPJ_G0028452.1 mouse_genomes_project 4 108192400 108243555 + MGP_LPJ_P0066565 Yipf1 protein_coding protein_coding MGP_LPJ_T0066566.1 MGP_LPJ_G0028452.1 mouse_genomes_project 4 108192406 108199327 + Yipf1 protein_coding processed_transcript MGP_LPJ_T0066567.1 MGP_LPJ_G0028452.1 mouse_genomes_project 4 108192421 108231934 + MGP_LPJ_P0066567 Yipf1 protein_coding protein_coding MGP_LPJ_T0066568.1 MGP_LPJ_G0028452.1 mouse_genomes_project 4 108192449 108225031 + MGP_LPJ_P0066568 Yipf1 protein_coding protein_coding MGP_LPJ_T0066569.1 MGP_LPJ_G0028452.1 mouse_genomes_project 4 108192474 108196907 + MGP_LPJ_P0066569 Yipf1 protein_coding protein_coding MGP_LPJ_T0066570.1 MGP_LPJ_G0028452.1 mouse_genomes_project 4 108193169 108193875 + Yipf1 protein_coding processed_transcript MGP_LPJ_T0066571.1 MGP_LPJ_G0028452.1 mouse_genomes_project 4 108193800 108224642 + Yipf1 protein_coding processed_transcript MGP_LPJ_T0066572.1 MGP_LPJ_G0028452.1 mouse_genomes_project 4 108196861 108243556 + Yipf1 protein_coding processed_transcript MGP_LPJ_T0066573.1 MGP_LPJ_G0028452.1 mouse_genomes_project 4 108202524 108216465 + Yipf1 protein_coding processed_transcript MGP_LPJ_T0066574.1 MGP_LPJ_G0028452.1 mouse_genomes_project 4 108223074 108233051 + Yipf1 protein_coding processed_transcript MGP_LPJ_T0066575.1 MGP_LPJ_G0028452.1 mouse_genomes_project 4 108224517 108243555 + Yipf1 protein_coding processed_transcript MGP_LPJ_T0069407.1 MGP_LPJ_G0029090.1 mouse_genomes_project 4 158123812 158157309 + MGP_LPJ_P0069407 Cep104 protein_coding protein_coding MGP_LPJ_T0069408.1 MGP_LPJ_G0029090.1 mouse_genomes_project 4 158136856 158157309 + MGP_LPJ_P0069408 Cep104 protein_coding nonsense_mediated_decay MGP_LPJ_T0069409.1 MGP_LPJ_G0029090.1 mouse_genomes_project 4 158137595 158138466 + Cep104 protein_coding retained_intron MGP_LPJ_T0066879.1 MGP_LPJ_G0028513.1 mouse_genomes_project 4 116358364 116398562 + MGP_LPJ_P0066879 protein_coding protein_coding MGP_LPJ_T0068050.1 MGP_LPJ_G0028774.1 mouse_genomes_project 4 134355954 134358250 + MGP_LPJ_P0068050 Gm10300 protein_coding protein_coding MGP_LPJ_T0068208.1 MGP_LPJ_G0028812.1 mouse_genomes_project 4 135972025 135982549 + MGP_LPJ_P0068208 Gpn2 protein_coding protein_coding MGP_LPJ_T0068209.1 MGP_LPJ_G0028812.1 mouse_genomes_project 4 135972082 135982299 + MGP_LPJ_P0068209 Gpn2 protein_coding protein_coding MGP_LPJ_T0068210.1 MGP_LPJ_G0028812.1 mouse_genomes_project 4 135972091 135975050 + Gpn2 protein_coding processed_transcript MGP_LPJ_T0065252.1 MGP_LPJ_G0028131.1 mouse_genomes_project 4 41838902 41842003 - Hint2 protein_coding processed_transcript MGP_LPJ_T0065253.1 MGP_LPJ_G0028131.1 mouse_genomes_project 4 41838902 41841998 - Hint2 protein_coding processed_transcript MGP_LPJ_T0065254.1 MGP_LPJ_G0028131.1 mouse_genomes_project 4 41838903 41840511 - Hint2 protein_coding processed_transcript MGP_LPJ_T0065255.1 MGP_LPJ_G0028131.1 mouse_genomes_project 4 41838904 41840282 - Hint2 protein_coding processed_transcript MGP_LPJ_T0065256.1 MGP_LPJ_G0028131.1 mouse_genomes_project 4 41838904 41842021 - MGP_LPJ_P0065256 Hint2 protein_coding protein_coding MGP_LPJ_T0065257.1 MGP_LPJ_G0028131.1 mouse_genomes_project 4 41838905 41842003 - Hint2 protein_coding processed_transcript MGP_LPJ_T0065258.1 MGP_LPJ_G0028131.1 mouse_genomes_project 4 41839349 41841298 - Hint2 protein_coding processed_transcript MGP_LPJ_T0066135.1 MGP_LPJ_G0028357.1 mouse_genomes_project 4 90460589 90467455 + MGP_LPJ_P0066135 Zfp352 protein_coding protein_coding MGP_LPJ_T0066136.1 MGP_LPJ_G0028357.1 mouse_genomes_project 4 90465379 90467035 + MGP_LPJ_P0066136 Zfp352 protein_coding protein_coding MGP_LPJ_T0066227.1 MGP_LPJ_G0028381.1 mouse_genomes_project 4 97611235 97611562 - MGP_LPJ_P0066227 Gm10192 protein_coding protein_coding MGP_LPJ_T0068064.1 MGP_LPJ_G0028779.1 mouse_genomes_project 4 134599744 134600935 - MGP_LPJ_P0068064 Rab42 protein_coding protein_coding MGP_LPJ_T0068302.1 MGP_LPJ_G0028828.1 mouse_genomes_project 4 136675626 136677933 - MGP_LPJ_P0068302 Zfp593 protein_coding protein_coding MGP_LPJ_T0068303.1 MGP_LPJ_G0028828.1 mouse_genomes_project 4 136675644 136677883 - Zfp593 protein_coding processed_transcript MGP_LPJ_T0100752.1 MGP_LPJ_G0039015.1 mouse_genomes_project 4 44866103 44866234 + Gm22247 snoRNA snoRNA MGP_LPJ_T0068981.1 MGP_LPJ_G0029009.1 mouse_genomes_project 4 151447254 151468398 - MGP_LPJ_P0068981 Zfp933 protein_coding protein_coding MGP_LPJ_T0068982.1 MGP_LPJ_G0029009.1 mouse_genomes_project 4 151450831 151468398 - MGP_LPJ_P0068982 Zfp933 protein_coding protein_coding MGP_LPJ_T0007951.1 MGP_LPJ_G0006500.1 mouse_genomes_project 4 122013282 122020215 + Gm12860 lincRNA lincRNA MGP_LPJ_T0001446.1 MGP_LPJ_G0001365.1 mouse_genomes_project 4 107097767 107098803 - TEC TEC MGP_LPJ_T0069493.1 MGP_LPJ_G0029106.1 mouse_genomes_project 4 159168597 159170046 + MGP_LPJ_P0069493 Hes5 protein_coding protein_coding MGP_LPJ_T0069494.1 MGP_LPJ_G0029106.1 mouse_genomes_project 4 159168645 159169081 + Hes5 protein_coding processed_transcript MGP_LPJ_T0101340.1 MGP_LPJ_G0039547.1 mouse_genomes_project 4 42347240 42349471 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101341.1 MGP_LPJ_G0039547.1 mouse_genomes_project 4 42348585 42348891 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0066975.1 MGP_LPJ_G0028536.1 mouse_genomes_project 4 117302143 117343021 + MGP_LPJ_P0066975 Pik3r3 protein_coding protein_coding MGP_LPJ_T0066976.1 MGP_LPJ_G0028536.1 mouse_genomes_project 4 117302186 117383330 + MGP_LPJ_P0066976 Pik3r3 protein_coding protein_coding MGP_LPJ_T0066977.1 MGP_LPJ_G0028536.1 mouse_genomes_project 4 117302221 117380115 + MGP_LPJ_P0066977 Pik3r3 protein_coding protein_coding MGP_LPJ_T0014498.1 MGP_LPJ_G0012589.1 mouse_genomes_project 4 48636733 48637701 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004645.1 MGP_LPJ_G0004026.1 mouse_genomes_project 4 160137711 160138398 - Mxra8os antisense antisense MGP_LPJ_T0004512.1 MGP_LPJ_G0003925.1 mouse_genomes_project 4 101097927 101102482 - Ube2uos antisense antisense MGP_LPJ_T0067540.1 MGP_LPJ_G0028671.1 mouse_genomes_project 4 126777194 126796691 - MGP_LPJ_P0067540 Cdca8 protein_coding protein_coding MGP_LPJ_T0067541.1 MGP_LPJ_G0028671.1 mouse_genomes_project 4 126777840 126796647 - MGP_LPJ_P0067541 Cdca8 protein_coding protein_coding MGP_LPJ_T0067542.1 MGP_LPJ_G0028671.1 mouse_genomes_project 4 126778285 126796181 - Cdca8 protein_coding processed_transcript MGP_LPJ_T0067543.1 MGP_LPJ_G0028671.1 mouse_genomes_project 4 126782353 126796555 - Cdca8 protein_coding processed_transcript MGP_LPJ_T0067544.1 MGP_LPJ_G0028671.1 mouse_genomes_project 4 126782533 126796616 - Cdca8 protein_coding retained_intron MGP_LPJ_T0067545.1 MGP_LPJ_G0028671.1 mouse_genomes_project 4 126786490 126799085 - MGP_LPJ_P0067545 Cdca8 protein_coding protein_coding MGP_LPJ_T0069429.1 MGP_LPJ_G0029093.1 mouse_genomes_project 4 158176565 158192382 - MGP_LPJ_P0069429 Ccdc27 protein_coding protein_coding MGP_LPJ_T0100759.1 MGP_LPJ_G0039022.1 mouse_genomes_project 4 54097768 54097983 - Gm25419 snoRNA snoRNA MGP_LPJ_T0098378.1 MGP_LPJ_G0036659.1 mouse_genomes_project 4 41661843 41662114 - Rmrp ribozyme ribozyme MGP_LPJ_T0001448.1 MGP_LPJ_G0001367.1 mouse_genomes_project 4 120600321 120600755 - TEC TEC MGP_LPJ_T0014457.1 MGP_LPJ_G0012548.1 mouse_genomes_project 4 33123357 33123791 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014745.1 MGP_LPJ_G0012836.1 mouse_genomes_project 4 137917361 137917439 + processed_pseudogene processed_pseudogene MGP_LPJ_T0065010.1 MGP_LPJ_G0028094.1 mouse_genomes_project 4 39795187 39798052 - MGP_LPJ_P0065010 Sigmar1 protein_coding protein_coding MGP_LPJ_T0065011.1 MGP_LPJ_G0028094.1 mouse_genomes_project 4 39795187 39798052 - MGP_LPJ_P0065011 Sigmar1 protein_coding protein_coding MGP_LPJ_T0065012.1 MGP_LPJ_G0028094.1 mouse_genomes_project 4 39795793 39801764 - Sigmar1 protein_coding processed_transcript MGP_LPJ_T0065013.1 MGP_LPJ_G0028094.1 mouse_genomes_project 4 39796198 39813036 - Sigmar1 protein_coding processed_transcript MGP_LPJ_T0065014.1 MGP_LPJ_G0028094.1 mouse_genomes_project 4 39797141 39797879 - Sigmar1 protein_coding retained_intron MGP_LPJ_T0065015.1 MGP_LPJ_G0028094.1 mouse_genomes_project 4 39797273 39797741 - Sigmar1 protein_coding retained_intron MGP_LPJ_T0065016.1 MGP_LPJ_G0028094.1 mouse_genomes_project 4 39797295 39798013 - Sigmar1 protein_coding processed_transcript MGP_LPJ_T0065017.1 MGP_LPJ_G0028094.1 mouse_genomes_project 4 39812464 39813794 - Sigmar1 protein_coding processed_transcript MGP_LPJ_T0014569.1 MGP_LPJ_G0012660.1 mouse_genomes_project 4 76511999 76512393 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014775.1 MGP_LPJ_G0012866.1 mouse_genomes_project 4 151667232 151668010 + processed_pseudogene processed_pseudogene MGP_LPJ_T0068448.1 MGP_LPJ_G0028862.1 mouse_genomes_project 4 138488301 138513482 + MGP_LPJ_P0068448 Cnr2 protein_coding protein_coding MGP_LPJ_T0068449.1 MGP_LPJ_G0028862.1 mouse_genomes_project 4 138505163 138513482 + MGP_LPJ_P0068449 Cnr2 protein_coding protein_coding MGP_LPJ_T0007979.1 MGP_LPJ_G0006518.1 mouse_genomes_project 4 131503106 131511804 + Gm26722 lincRNA lincRNA MGP_LPJ_T0004586.1 MGP_LPJ_G0003983.1 mouse_genomes_project 4 141211611 141214080 + AB041806 antisense antisense MGP_LPJ_T0067669.1 MGP_LPJ_G0028701.1 mouse_genomes_project 4 128855439 128967360 - MGP_LPJ_P0067669 Zmym4 protein_coding protein_coding MGP_LPJ_T0067670.1 MGP_LPJ_G0028701.1 mouse_genomes_project 4 128862141 128863952 - Zmym4 protein_coding processed_transcript MGP_LPJ_T0067671.1 MGP_LPJ_G0028701.1 mouse_genomes_project 4 128902882 128912828 - Zmym4 protein_coding processed_transcript MGP_LPJ_T0067672.1 MGP_LPJ_G0028701.1 mouse_genomes_project 4 128908083 128912716 - Zmym4 protein_coding processed_transcript MGP_LPJ_T0067673.1 MGP_LPJ_G0028701.1 mouse_genomes_project 4 128912545 128921566 - Zmym4 protein_coding processed_transcript MGP_LPJ_T0067674.1 MGP_LPJ_G0028701.1 mouse_genomes_project 4 128921204 128923931 - Zmym4 protein_coding processed_transcript MGP_LPJ_T0067675.1 MGP_LPJ_G0028701.1 mouse_genomes_project 4 128923929 128967405 - Zmym4 protein_coding processed_transcript MGP_LPJ_T0067676.1 MGP_LPJ_G0028701.1 mouse_genomes_project 4 128923962 128967429 - Zmym4 protein_coding processed_transcript MGP_LPJ_T0014747.1 MGP_LPJ_G0012838.1 mouse_genomes_project 4 138317488 138317966 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011581.1 MGP_LPJ_G0009699.1 mouse_genomes_project 4 52471742 52472041 - Gm25445 misc_RNA misc_RNA MGP_LPJ_T0066220.1 MGP_LPJ_G0028375.1 mouse_genomes_project 4 96709286 96766496 - MGP_LPJ_P0066220 Cyp2j11 protein_coding protein_coding MGP_LPJ_T0008022.1 MGP_LPJ_G0006546.1 mouse_genomes_project 4 142869375 142887327 - 4933427I22Rik lincRNA lincRNA MGP_LPJ_T0008023.1 MGP_LPJ_G0006546.1 mouse_genomes_project 4 142869947 142876748 - 4933427I22Rik lincRNA lincRNA MGP_LPJ_T0065573.1 MGP_LPJ_G0028210.1 mouse_genomes_project 4 51689687 51690632 + MGP_LPJ_P0065573 Olfr270 protein_coding protein_coding MGP_LPJ_T0065574.1 MGP_LPJ_G0028210.1 mouse_genomes_project 4 51689693 51690632 + MGP_LPJ_P0065574 Olfr270 protein_coding protein_coding MGP_LPJ_T0099526.1 MGP_LPJ_G0037789.1 mouse_genomes_project 4 131659542 131659682 + Gm24621 snRNA snRNA MGP_LPJ_T0067077.1 MGP_LPJ_G0028555.1 mouse_genomes_project 4 118230796 118253161 + MGP_LPJ_P0067077 Ptch2 protein_coding protein_coding MGP_LPJ_T0067078.1 MGP_LPJ_G0028555.1 mouse_genomes_project 4 118230817 118253161 + MGP_LPJ_P0067078 Ptch2 protein_coding nonsense_mediated_decay MGP_LPJ_T0067079.1 MGP_LPJ_G0028555.1 mouse_genomes_project 4 118241457 118242851 + Ptch2 protein_coding retained_intron MGP_LPJ_T0067080.1 MGP_LPJ_G0028555.1 mouse_genomes_project 4 118241775 118246476 + MGP_LPJ_P0067080 Ptch2 protein_coding nonsense_mediated_decay MGP_LPJ_T0067081.1 MGP_LPJ_G0028555.1 mouse_genomes_project 4 118248196 118249050 + Ptch2 protein_coding retained_intron MGP_LPJ_T0067082.1 MGP_LPJ_G0028555.1 mouse_genomes_project 4 118251201 118253879 + Ptch2 protein_coding retained_intron MGP_LPJ_T0099517.1 MGP_LPJ_G0037780.1 mouse_genomes_project 4 118358459 118358575 + Gm23287 snRNA snRNA MGP_LPJ_T0069104.1 MGP_LPJ_G0029036.1 mouse_genomes_project 4 152856572 152874638 + MGP_LPJ_P0069104 Dffa protein_coding protein_coding MGP_LPJ_T0069105.1 MGP_LPJ_G0029036.1 mouse_genomes_project 4 152856572 152871571 + MGP_LPJ_P0069105 Dffa protein_coding protein_coding MGP_LPJ_T0069106.1 MGP_LPJ_G0029036.1 mouse_genomes_project 4 152860162 152860628 + Dffa protein_coding processed_transcript MGP_LPJ_T0014488.1 MGP_LPJ_G0012579.1 mouse_genomes_project 4 45485712 45485955 - processed_pseudogene processed_pseudogene MGP_LPJ_T0069746.1 MGP_LPJ_G0029156.1 mouse_genomes_project 4 160570245 160583097 + MGP_LPJ_P0069746 Noc2l protein_coding protein_coding MGP_LPJ_T0069747.1 MGP_LPJ_G0029156.1 mouse_genomes_project 4 160570286 160583084 + MGP_LPJ_P0069747 Noc2l protein_coding protein_coding MGP_LPJ_T0007929.1 MGP_LPJ_G0006483.1 mouse_genomes_project 4 106873040 106891821 - Gm12729 lincRNA lincRNA MGP_LPJ_T0007807.1 MGP_LPJ_G0006382.1 mouse_genomes_project 4 194027 205652 - Gm26857 lincRNA lincRNA MGP_LPJ_T0066926.1 MGP_LPJ_G0028527.1 mouse_genomes_project 4 117029158 117082385 - Faah protein_coding retained_intron MGP_LPJ_T0066927.1 MGP_LPJ_G0028527.1 mouse_genomes_project 4 117061583 117082426 - Faah protein_coding retained_intron MGP_LPJ_T0066928.1 MGP_LPJ_G0028527.1 mouse_genomes_project 4 117061583 117082636 - MGP_LPJ_P0066928 Faah protein_coding protein_coding MGP_LPJ_T0066929.1 MGP_LPJ_G0028527.1 mouse_genomes_project 4 117063107 117082437 - Faah protein_coding retained_intron MGP_LPJ_T0066930.1 MGP_LPJ_G0028527.1 mouse_genomes_project 4 117063220 117064981 - Faah protein_coding retained_intron MGP_LPJ_T0066931.1 MGP_LPJ_G0028527.1 mouse_genomes_project 4 117063628 117064850 - Faah protein_coding retained_intron MGP_LPJ_T0066932.1 MGP_LPJ_G0028527.1 mouse_genomes_project 4 117066637 117082385 - Faah protein_coding processed_transcript MGP_LPJ_T0066933.1 MGP_LPJ_G0028527.1 mouse_genomes_project 4 117070642 117082407 - Faah protein_coding processed_transcript MGP_LPJ_T0099539.1 MGP_LPJ_G0037802.1 mouse_genomes_project 4 143942888 143943004 + Gm26226 snRNA snRNA MGP_LPJ_T0066039.1 MGP_LPJ_G0028323.1 mouse_genomes_project 4 86125540 86163289 + Adamtsl1 protein_coding retained_intron MGP_LPJ_T0066040.1 MGP_LPJ_G0028323.1 mouse_genomes_project 4 86125540 86522726 + MGP_LPJ_P0066040 Adamtsl1 protein_coding protein_coding MGP_LPJ_T0066041.1 MGP_LPJ_G0028323.1 mouse_genomes_project 4 86125548 86344233 + MGP_LPJ_P0066041 Adamtsl1 protein_coding protein_coding MGP_LPJ_T0066042.1 MGP_LPJ_G0028323.1 mouse_genomes_project 4 86125553 86522729 + MGP_LPJ_P0066042 Adamtsl1 protein_coding protein_coding MGP_LPJ_T0066043.1 MGP_LPJ_G0028323.1 mouse_genomes_project 4 86125600 86287736 + MGP_LPJ_P0066043 Adamtsl1 protein_coding protein_coding MGP_LPJ_T0066044.1 MGP_LPJ_G0028323.1 mouse_genomes_project 4 86125645 86323408 + Adamtsl1 protein_coding retained_intron MGP_LPJ_T0066045.1 MGP_LPJ_G0028323.1 mouse_genomes_project 4 86163126 86191609 + Adamtsl1 protein_coding retained_intron MGP_LPJ_T0066046.1 MGP_LPJ_G0028323.1 mouse_genomes_project 4 86287357 86339398 + MGP_LPJ_P0066046 Adamtsl1 protein_coding protein_coding MGP_LPJ_T0066047.1 MGP_LPJ_G0028323.1 mouse_genomes_project 4 86369021 86369635 + Adamtsl1 protein_coding processed_transcript MGP_LPJ_T0066048.1 MGP_LPJ_G0028323.1 mouse_genomes_project 4 86369298 86522726 + Adamtsl1 protein_coding retained_intron MGP_LPJ_T0014589.1 MGP_LPJ_G0012680.1 mouse_genomes_project 4 85202510 85202913 + processed_pseudogene processed_pseudogene MGP_LPJ_T0067499.1 MGP_LPJ_G0028658.1 mouse_genomes_project 4 125687465 125693638 + MGP_LPJ_P0067499 Mycbp protein_coding protein_coding MGP_LPJ_T0067500.1 MGP_LPJ_G0028658.1 mouse_genomes_project 4 125687555 125693699 + MGP_LPJ_P0067500 Mycbp protein_coding protein_coding MGP_LPJ_T0067501.1 MGP_LPJ_G0028658.1 mouse_genomes_project 4 125687592 125692289 + Mycbp protein_coding processed_transcript MGP_LPJ_T0067502.1 MGP_LPJ_G0028658.1 mouse_genomes_project 4 125687687 125693804 + Mycbp protein_coding processed_transcript MGP_LPJ_T0068133.1 MGP_LPJ_G0028793.1 mouse_genomes_project 4 135166897 135183103 - MGP_LPJ_P0068133 Ppp1r8 protein_coding protein_coding MGP_LPJ_T0068134.1 MGP_LPJ_G0028793.1 mouse_genomes_project 4 135167795 135183057 - MGP_LPJ_P0068134 Ppp1r8 protein_coding protein_coding MGP_LPJ_T0068135.1 MGP_LPJ_G0028793.1 mouse_genomes_project 4 135168923 135172921 - Ppp1r8 protein_coding processed_transcript MGP_LPJ_T0068136.1 MGP_LPJ_G0028793.1 mouse_genomes_project 4 135170346 135183058 - Ppp1r8 protein_coding processed_transcript MGP_LPJ_T0068137.1 MGP_LPJ_G0028793.1 mouse_genomes_project 4 135174643 135183068 - Ppp1r8 protein_coding processed_transcript MGP_LPJ_T0014647.1 MGP_LPJ_G0012738.1 mouse_genomes_project 4 106338644 106342618 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100803.1 MGP_LPJ_G0039066.1 mouse_genomes_project 4 132964226 132964309 + Gm23711 snoRNA snoRNA MGP_LPJ_T0011600.1 MGP_LPJ_G0009718.1 mouse_genomes_project 4 156223676 156224012 - Gm27500 misc_RNA misc_RNA MGP_LPJ_T0010627.1 MGP_LPJ_G0008745.1 mouse_genomes_project 4 99134338 99134434 + Gm26154 miRNA miRNA MGP_LPJ_T0014553.1 MGP_LPJ_G0012644.1 mouse_genomes_project 4 72642056 72649738 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014663.1 MGP_LPJ_G0012754.1 mouse_genomes_project 4 110675283 110676427 + processed_pseudogene processed_pseudogene MGP_LPJ_T0069119.1 MGP_LPJ_G0029040.1 mouse_genomes_project 4 152932581 153068156 - MGP_LPJ_P0069119 Kif1b protein_coding protein_coding MGP_LPJ_T0069120.1 MGP_LPJ_G0029040.1 mouse_genomes_project 4 152934281 152942485 - Kif1b protein_coding retained_intron MGP_LPJ_T0069121.1 MGP_LPJ_G0029040.1 mouse_genomes_project 4 152935126 152956520 - MGP_LPJ_P0069121 Kif1b protein_coding protein_coding MGP_LPJ_T0069122.1 MGP_LPJ_G0029040.1 mouse_genomes_project 4 152936497 153067970 - MGP_LPJ_P0069122 Kif1b protein_coding protein_coding MGP_LPJ_T0069123.1 MGP_LPJ_G0029040.1 mouse_genomes_project 4 152964012 152968478 - Kif1b protein_coding retained_intron MGP_LPJ_T0069124.1 MGP_LPJ_G0029040.1 mouse_genomes_project 4 152964411 152973413 - Kif1b protein_coding retained_intron MGP_LPJ_T0069125.1 MGP_LPJ_G0029040.1 mouse_genomes_project 4 152974592 152983168 - Kif1b protein_coding retained_intron MGP_LPJ_T0069126.1 MGP_LPJ_G0029040.1 mouse_genomes_project 4 152993277 153068087 - MGP_LPJ_P0069126 Kif1b protein_coding protein_coding MGP_LPJ_T0069127.1 MGP_LPJ_G0029040.1 mouse_genomes_project 4 153004847 153007470 - Kif1b protein_coding retained_intron MGP_LPJ_T0069128.1 MGP_LPJ_G0029040.1 mouse_genomes_project 4 153023979 153068157 - Kif1b protein_coding retained_intron MGP_LPJ_T0069129.1 MGP_LPJ_G0029040.1 mouse_genomes_project 4 153051923 153068128 - Kif1b protein_coding retained_intron MGP_LPJ_T0067182.1 MGP_LPJ_G0028573.1 mouse_genomes_project 4 119085874 119092051 - Ipo13 protein_coding processed_transcript MGP_LPJ_T0067183.1 MGP_LPJ_G0028573.1 mouse_genomes_project 4 119085874 119107797 - MGP_LPJ_P0067183 Ipo13 protein_coding protein_coding MGP_LPJ_T0067184.1 MGP_LPJ_G0028573.1 mouse_genomes_project 4 119086015 119086503 - Ipo13 protein_coding processed_transcript MGP_LPJ_T0067185.1 MGP_LPJ_G0028573.1 mouse_genomes_project 4 119086280 119087262 - Ipo13 protein_coding processed_transcript MGP_LPJ_T0067186.1 MGP_LPJ_G0028573.1 mouse_genomes_project 4 119086728 119087281 - Ipo13 protein_coding processed_transcript MGP_LPJ_T0067187.1 MGP_LPJ_G0028573.1 mouse_genomes_project 4 119092343 119095256 - Ipo13 protein_coding processed_transcript MGP_LPJ_T0014456.1 MGP_LPJ_G0012547.1 mouse_genomes_project 4 32649534 32649876 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010594.1 MGP_LPJ_G0008712.1 mouse_genomes_project 4 10484069 10484186 - Gm23162 miRNA miRNA MGP_LPJ_T0068600.1 MGP_LPJ_G0028898.1 mouse_genomes_project 4 140636671 140694460 + MGP_LPJ_P0068600 Ece1 protein_coding protein_coding MGP_LPJ_T0068601.1 MGP_LPJ_G0028898.1 mouse_genomes_project 4 140694076 140716564 + MGP_LPJ_P0068601 Ece1 protein_coding protein_coding MGP_LPJ_T0068602.1 MGP_LPJ_G0028898.1 mouse_genomes_project 4 140694287 140707524 + Ece1 protein_coding processed_transcript MGP_LPJ_T0068603.1 MGP_LPJ_G0028898.1 mouse_genomes_project 4 140694331 140748561 + MGP_LPJ_P0068603 Ece1 protein_coding protein_coding MGP_LPJ_T0007910.1 MGP_LPJ_G0006468.1 mouse_genomes_project 4 94467443 94799090 - lincRNA lincRNA MGP_LPJ_T0007991.1 MGP_LPJ_G0006525.1 mouse_genomes_project 4 133726498 133746261 + Gm831 lincRNA lincRNA MGP_LPJ_T0068694.1 MGP_LPJ_G0028923.1 mouse_genomes_project 4 142089080 142179252 + MGP_LPJ_P0068694 Capzb protein_coding protein_coding MGP_LPJ_T0068695.1 MGP_LPJ_G0028923.1 mouse_genomes_project 4 142089082 142190923 + MGP_LPJ_P0068695 Capzb protein_coding protein_coding MGP_LPJ_T0068696.1 MGP_LPJ_G0028923.1 mouse_genomes_project 4 142089097 142135412 + Capzb protein_coding retained_intron MGP_LPJ_T0068697.1 MGP_LPJ_G0028923.1 mouse_genomes_project 4 142089127 142190979 + Capzb protein_coding processed_transcript MGP_LPJ_T0068698.1 MGP_LPJ_G0028923.1 mouse_genomes_project 4 142089184 142194269 + MGP_LPJ_P0068698 Capzb protein_coding protein_coding MGP_LPJ_T0068699.1 MGP_LPJ_G0028923.1 mouse_genomes_project 4 142090154 142190605 + MGP_LPJ_P0068699 Capzb protein_coding protein_coding MGP_LPJ_T0068700.1 MGP_LPJ_G0028923.1 mouse_genomes_project 4 142090269 142135672 + Capzb protein_coding retained_intron MGP_LPJ_T0068701.1 MGP_LPJ_G0028923.1 mouse_genomes_project 4 142095425 142160148 + MGP_LPJ_P0068701 Capzb protein_coding protein_coding MGP_LPJ_T0068702.1 MGP_LPJ_G0028923.1 mouse_genomes_project 4 142123201 142186254 + MGP_LPJ_P0068702 Capzb protein_coding protein_coding MGP_LPJ_T0068703.1 MGP_LPJ_G0028923.1 mouse_genomes_project 4 142188110 142188980 + Capzb protein_coding processed_transcript MGP_LPJ_T0008049.1 MGP_LPJ_G0006572.1 mouse_genomes_project 4 160051211 160057410 + lincRNA lincRNA MGP_LPJ_T0067709.1 MGP_LPJ_G0028712.1 mouse_genomes_project 4 130009284 130052625 - MGP_LPJ_P0067709 CK137956 protein_coding protein_coding MGP_LPJ_T0014372.1 MGP_LPJ_G0012463.1 mouse_genomes_project 4 10328234 10328628 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004445.1 MGP_LPJ_G0003875.1 mouse_genomes_project 4 8253233 8254617 - Gm11831 antisense antisense MGP_LPJ_T0066778.1 MGP_LPJ_G0028490.1 mouse_genomes_project 4 111270967 111359283 - MGP_LPJ_P0066778 Elavl4 protein_coding protein_coding MGP_LPJ_T0066779.1 MGP_LPJ_G0028490.1 mouse_genomes_project 4 111270982 111425252 - MGP_LPJ_P0066779 Elavl4 protein_coding protein_coding MGP_LPJ_T0066780.1 MGP_LPJ_G0028490.1 mouse_genomes_project 4 111270982 111364477 - MGP_LPJ_P0066780 Elavl4 protein_coding protein_coding MGP_LPJ_T0066781.1 MGP_LPJ_G0028490.1 mouse_genomes_project 4 111270982 111362020 - MGP_LPJ_P0066781 Elavl4 protein_coding protein_coding MGP_LPJ_T0066782.1 MGP_LPJ_G0028490.1 mouse_genomes_project 4 111270982 111358645 - MGP_LPJ_P0066782 Elavl4 protein_coding protein_coding MGP_LPJ_T0066783.1 MGP_LPJ_G0028490.1 mouse_genomes_project 4 111270982 111359283 - MGP_LPJ_P0066783 Elavl4 protein_coding protein_coding MGP_LPJ_T0066784.1 MGP_LPJ_G0028490.1 mouse_genomes_project 4 111270982 111358645 - MGP_LPJ_P0066784 Elavl4 protein_coding protein_coding MGP_LPJ_T0066785.1 MGP_LPJ_G0028490.1 mouse_genomes_project 4 111273604 111291075 - Elavl4 protein_coding processed_transcript MGP_LPJ_T0066786.1 MGP_LPJ_G0028490.1 mouse_genomes_project 4 111280460 111358372 - MGP_LPJ_P0066786 Elavl4 protein_coding protein_coding MGP_LPJ_T0066787.1 MGP_LPJ_G0028490.1 mouse_genomes_project 4 111293506 111345946 - Elavl4 protein_coding processed_transcript MGP_LPJ_T0066788.1 MGP_LPJ_G0028490.1 mouse_genomes_project 4 111294535 111359283 - MGP_LPJ_P0066788 Elavl4 protein_coding protein_coding MGP_LPJ_T0066789.1 MGP_LPJ_G0028490.1 mouse_genomes_project 4 111322748 111362642 - MGP_LPJ_P0066789 Elavl4 protein_coding protein_coding MGP_LPJ_T0066877.1 MGP_LPJ_G0028511.1 mouse_genomes_project 4 116210016 116221121 + MGP_LPJ_P0066877 Cyp4a29 protein_coding protein_coding MGP_LPJ_T0007953.1 MGP_LPJ_G0006502.1 mouse_genomes_project 4 126109662 126116821 - Gm12916 lincRNA lincRNA MGP_LPJ_T0067351.1 MGP_LPJ_G0028615.1 mouse_genomes_project 4 120973247 120975006 + MGP_LPJ_P0067351 Guca2a protein_coding protein_coding MGP_LPJ_T0014373.1 MGP_LPJ_G0012464.1 mouse_genomes_project 4 10467008 10467744 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010680.1 MGP_LPJ_G0008798.1 mouse_genomes_project 4 160557822 160557879 - Mir7658 miRNA miRNA MGP_LPJ_T0017981.1 MGP_LPJ_G0015452.1 mouse_genomes_project 4 22211526 22218014 - C230012O17Rik processed_transcript processed_transcript MGP_LPJ_T0017982.1 MGP_LPJ_G0015452.1 mouse_genomes_project 4 22213061 22218481 - C230012O17Rik processed_transcript processed_transcript MGP_LPJ_T0017983.1 MGP_LPJ_G0015452.1 mouse_genomes_project 4 22217769 22218847 - C230012O17Rik processed_transcript processed_transcript MGP_LPJ_T0014434.1 MGP_LPJ_G0012525.1 mouse_genomes_project 4 26033886 26034303 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004589.1 MGP_LPJ_G0003986.1 mouse_genomes_project 4 143094853 143096614 + Gm13029 antisense antisense MGP_LPJ_T0014651.1 MGP_LPJ_G0012742.1 mouse_genomes_project 4 107620335 107620549 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014501.1 MGP_LPJ_G0012592.1 mouse_genomes_project 4 50749991 50750291 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014504.1 MGP_LPJ_G0012595.1 mouse_genomes_project 4 51035782 51037171 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007876.1 MGP_LPJ_G0006438.1 mouse_genomes_project 4 57114912 57143833 + Gm26889 lincRNA lincRNA MGP_LPJ_T0066657.1 MGP_LPJ_G0028464.1 mouse_genomes_project 4 109104477 109157224 - MGP_LPJ_P0066657 Zyg11a protein_coding protein_coding MGP_LPJ_T0066658.1 MGP_LPJ_G0028464.1 mouse_genomes_project 4 109104477 109157199 - MGP_LPJ_P0066658 Zyg11a protein_coding protein_coding MGP_LPJ_T0014643.1 MGP_LPJ_G0012734.1 mouse_genomes_project 4 104621362 104622345 + processed_pseudogene processed_pseudogene MGP_LPJ_T0018015.1 MGP_LPJ_G0015475.1 mouse_genomes_project 4 95863915 95890256 - Gm830 processed_transcript processed_transcript MGP_LPJ_T0102154.1 MGP_LPJ_G0040191.1 mouse_genomes_project 4 116423577 116470697 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0069682.1 MGP_LPJ_G0029141.1 mouse_genomes_project 4 160194378 160220854 + MGP_LPJ_P0069682 Acap3 protein_coding protein_coding MGP_LPJ_T0069683.1 MGP_LPJ_G0029141.1 mouse_genomes_project 4 160194431 160220855 + MGP_LPJ_P0069683 Acap3 protein_coding protein_coding MGP_LPJ_T0069684.1 MGP_LPJ_G0029141.1 mouse_genomes_project 4 160194458 160213153 + Acap3 protein_coding processed_transcript MGP_LPJ_T0069685.1 MGP_LPJ_G0029141.1 mouse_genomes_project 4 160194828 160213295 + Acap3 protein_coding processed_transcript MGP_LPJ_T0069686.1 MGP_LPJ_G0029141.1 mouse_genomes_project 4 160194868 160220855 + Acap3 protein_coding processed_transcript MGP_LPJ_T0069687.1 MGP_LPJ_G0029141.1 mouse_genomes_project 4 160215271 160216374 + Acap3 protein_coding retained_intron MGP_LPJ_T0069688.1 MGP_LPJ_G0029141.1 mouse_genomes_project 4 160216262 160218714 + Acap3 protein_coding retained_intron MGP_LPJ_T0069689.1 MGP_LPJ_G0029141.1 mouse_genomes_project 4 160216924 160218945 + Acap3 protein_coding processed_transcript MGP_LPJ_T0069690.1 MGP_LPJ_G0029141.1 mouse_genomes_project 4 160218962 160219521 + Acap3 protein_coding processed_transcript MGP_LPJ_T0067152.1 MGP_LPJ_G0028569.1 mouse_genomes_project 4 119057880 119063579 - MGP_LPJ_P0067152 Ccdc24 protein_coding protein_coding MGP_LPJ_T0067153.1 MGP_LPJ_G0028569.1 mouse_genomes_project 4 119059005 119060323 - Ccdc24 protein_coding processed_transcript MGP_LPJ_T0067154.1 MGP_LPJ_G0028569.1 mouse_genomes_project 4 119060098 119062645 - Ccdc24 protein_coding retained_intron MGP_LPJ_T0067156.1 MGP_LPJ_G0028569.1 mouse_genomes_project 4 119060609 119063936 - MGP_LPJ_P0067156 Ccdc24 protein_coding protein_coding MGP_LPJ_T0067157.1 MGP_LPJ_G0028569.1 mouse_genomes_project 4 119060858 119062451 - MGP_LPJ_P0067157 Ccdc24 protein_coding protein_coding MGP_LPJ_T0067158.1 MGP_LPJ_G0028569.1 mouse_genomes_project 4 119060973 119063902 - MGP_LPJ_P0067158 Ccdc24 protein_coding protein_coding MGP_LPJ_T0067159.1 MGP_LPJ_G0028569.1 mouse_genomes_project 4 119061114 119062679 - Ccdc24 protein_coding processed_transcript MGP_LPJ_T0067160.1 MGP_LPJ_G0028569.1 mouse_genomes_project 4 119061492 119063939 - MGP_LPJ_P0067160 Ccdc24 protein_coding nonsense_mediated_decay MGP_LPJ_T0067161.1 MGP_LPJ_G0028569.1 mouse_genomes_project 4 119061889 119063902 - MGP_LPJ_P0067161 Ccdc24 protein_coding protein_coding MGP_LPJ_T0004611.1 MGP_LPJ_G0004002.1 mouse_genomes_project 4 152650595 152651410 - Gm15969 antisense antisense MGP_LPJ_T0010631.1 MGP_LPJ_G0008749.1 mouse_genomes_project 4 109004189 109004282 + Mir6397 miRNA miRNA MGP_LPJ_T0004646.1 MGP_LPJ_G0004027.1 mouse_genomes_project 4 160328145 160332699 - Gm16008 antisense antisense MGP_LPJ_T0004647.1 MGP_LPJ_G0004027.1 mouse_genomes_project 4 160332601 160341311 - Gm16008 antisense antisense MGP_LPJ_T0004648.1 MGP_LPJ_G0004027.1 mouse_genomes_project 4 160336023 160341290 - Gm16008 antisense antisense MGP_LPJ_T0014514.1 MGP_LPJ_G0012605.1 mouse_genomes_project 4 53433638 53434206 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014634.1 MGP_LPJ_G0012725.1 mouse_genomes_project 4 101151935 101152392 + processed_pseudogene processed_pseudogene MGP_LPJ_T0065204.1 MGP_LPJ_G0028123.1 mouse_genomes_project 4 41687356 41696115 - Tpm2 protein_coding processed_transcript MGP_LPJ_T0065205.1 MGP_LPJ_G0028123.1 mouse_genomes_project 4 41687356 41696141 - MGP_LPJ_P0065205 Tpm2 protein_coding protein_coding MGP_LPJ_T0065206.1 MGP_LPJ_G0028123.1 mouse_genomes_project 4 41687356 41696272 - MGP_LPJ_P0065206 Tpm2 protein_coding protein_coding MGP_LPJ_T0065207.1 MGP_LPJ_G0028123.1 mouse_genomes_project 4 41687357 41696065 - MGP_LPJ_P0065207 Tpm2 protein_coding protein_coding MGP_LPJ_T0065208.1 MGP_LPJ_G0028123.1 mouse_genomes_project 4 41688327 41692346 - Tpm2 protein_coding processed_transcript MGP_LPJ_T0065209.1 MGP_LPJ_G0028123.1 mouse_genomes_project 4 41692344 41696442 - MGP_LPJ_P0065209 Tpm2 protein_coding protein_coding MGP_LPJ_T0017994.1 MGP_LPJ_G0015460.1 mouse_genomes_project 4 44072697 44074544 - Gm12409 processed_transcript processed_transcript MGP_LPJ_T0014686.1 MGP_LPJ_G0012777.1 mouse_genomes_project 4 118902163 118904851 - processed_pseudogene processed_pseudogene MGP_LPJ_T0064403.1 MGP_LPJ_G0027947.1 mouse_genomes_project 4 57855 90047 - MGP_LPJ_P0064403 Tmem68 protein_coding protein_coding MGP_LPJ_T0064404.1 MGP_LPJ_G0027947.1 mouse_genomes_project 4 57855 90003 - MGP_LPJ_P0064404 Tmem68 protein_coding nonsense_mediated_decay MGP_LPJ_T0064405.1 MGP_LPJ_G0027947.1 mouse_genomes_project 4 59142 60967 - Tmem68 protein_coding retained_intron MGP_LPJ_T0064406.1 MGP_LPJ_G0027947.1 mouse_genomes_project 4 83925 89998 - Tmem68 protein_coding retained_intron MGP_LPJ_T0064407.1 MGP_LPJ_G0027947.1 mouse_genomes_project 4 83944 89998 - Tmem68 protein_coding processed_transcript MGP_LPJ_T0064408.1 MGP_LPJ_G0027947.1 mouse_genomes_project 4 84119 88927 - MGP_LPJ_P0064408 Tmem68 protein_coding protein_coding MGP_LPJ_T0068369.1 MGP_LPJ_G0028845.1 mouse_genomes_project 4 137354964 137391051 + MGP_LPJ_P0068369 Rhd protein_coding protein_coding MGP_LPJ_T0068370.1 MGP_LPJ_G0028845.1 mouse_genomes_project 4 137372143 137385194 + Rhd protein_coding retained_intron MGP_LPJ_T0067651.1 MGP_LPJ_G0028697.1 mouse_genomes_project 4 128664888 128699131 + MGP_LPJ_P0067651 Psmb2 protein_coding protein_coding MGP_LPJ_T0067652.1 MGP_LPJ_G0028697.1 mouse_genomes_project 4 128664937 128674544 + Psmb2 protein_coding processed_transcript MGP_LPJ_T0067653.1 MGP_LPJ_G0028697.1 mouse_genomes_project 4 128664962 128697179 + Psmb2 protein_coding processed_transcript MGP_LPJ_T0014378.1 MGP_LPJ_G0012469.1 mouse_genomes_project 4 12412320 12412842 + processed_pseudogene processed_pseudogene MGP_LPJ_T0065507.1 MGP_LPJ_G0028188.1 mouse_genomes_project 4 46750452 46785952 + Invs protein_coding processed_transcript MGP_LPJ_T0065508.1 MGP_LPJ_G0028188.1 mouse_genomes_project 4 46750492 46751746 + Invs protein_coding processed_transcript MGP_LPJ_T0065509.1 MGP_LPJ_G0028188.1 mouse_genomes_project 4 46750494 46916443 + MGP_LPJ_P0065509 Invs protein_coding protein_coding MGP_LPJ_T0065510.1 MGP_LPJ_G0028188.1 mouse_genomes_project 4 46750508 46758848 + Invs protein_coding processed_transcript MGP_LPJ_T0065511.1 MGP_LPJ_G0028188.1 mouse_genomes_project 4 46750518 46911840 + MGP_LPJ_P0065511 Invs protein_coding nonsense_mediated_decay MGP_LPJ_T0065512.1 MGP_LPJ_G0028188.1 mouse_genomes_project 4 46864993 46880029 + Invs protein_coding processed_transcript MGP_LPJ_T0100798.1 MGP_LPJ_G0039061.1 mouse_genomes_project 4 125006982 125007113 + Gm22154 snoRNA snoRNA MGP_LPJ_T0064492.1 MGP_LPJ_G0027967.1 mouse_genomes_project 4 5916623 5929591 + Clvs1 protein_coding processed_transcript MGP_LPJ_T0064493.1 MGP_LPJ_G0027967.1 mouse_genomes_project 4 5916647 5999528 + Clvs1 protein_coding processed_transcript MGP_LPJ_T0064494.1 MGP_LPJ_G0027967.1 mouse_genomes_project 4 5916647 6108637 + MGP_LPJ_P0064494 Clvs1 protein_coding protein_coding MGP_LPJ_T0064495.1 MGP_LPJ_G0027967.1 mouse_genomes_project 4 5916660 5929589 + Clvs1 protein_coding processed_transcript MGP_LPJ_T0064496.1 MGP_LPJ_G0027967.1 mouse_genomes_project 4 5916677 5928751 + Clvs1 protein_coding processed_transcript MGP_LPJ_T0064497.1 MGP_LPJ_G0027967.1 mouse_genomes_project 4 5918781 6108637 + MGP_LPJ_P0064497 Clvs1 protein_coding protein_coding MGP_LPJ_T0064498.1 MGP_LPJ_G0027967.1 mouse_genomes_project 4 5957809 6086633 + Clvs1 protein_coding processed_transcript MGP_LPJ_T0064499.1 MGP_LPJ_G0027967.1 mouse_genomes_project 4 5981664 6086670 + Clvs1 protein_coding processed_transcript MGP_LPJ_T0014608.1 MGP_LPJ_G0012699.1 mouse_genomes_project 4 92666463 92666758 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014555.1 MGP_LPJ_G0012646.1 mouse_genomes_project 4 73139022 73139885 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010610.1 MGP_LPJ_G0008728.1 mouse_genomes_project 4 41816092 41816225 + Gm25262 miRNA miRNA MGP_LPJ_T0018056.1 MGP_LPJ_G0015497.1 mouse_genomes_project 4 143823098 143831737 + Gm13032 processed_transcript processed_transcript MGP_LPJ_T0007848.1 MGP_LPJ_G0006417.1 mouse_genomes_project 4 41921616 41926115 + lincRNA lincRNA MGP_LPJ_T0098039.1 MGP_LPJ_G0036320.1 mouse_genomes_project 4 159958174 159960314 + pseudogene pseudogene MGP_LPJ_T0068178.1 MGP_LPJ_G0028803.1 mouse_genomes_project 4 135630072 135642830 - MGP_LPJ_P0068178 Tmem222 protein_coding protein_coding MGP_LPJ_T0068179.1 MGP_LPJ_G0028803.1 mouse_genomes_project 4 135630857 135642700 - MGP_LPJ_P0068179 Tmem222 protein_coding nonsense_mediated_decay MGP_LPJ_T0068180.1 MGP_LPJ_G0028803.1 mouse_genomes_project 4 135630903 135642808 - MGP_LPJ_P0068180 Tmem222 protein_coding nonsense_mediated_decay MGP_LPJ_T0068181.1 MGP_LPJ_G0028803.1 mouse_genomes_project 4 135630914 135642656 - MGP_LPJ_P0068181 Tmem222 protein_coding nonsense_mediated_decay MGP_LPJ_T0068182.1 MGP_LPJ_G0028803.1 mouse_genomes_project 4 135630929 135634134 - Tmem222 protein_coding retained_intron MGP_LPJ_T0068183.1 MGP_LPJ_G0028803.1 mouse_genomes_project 4 135634909 135642789 - Tmem222 protein_coding retained_intron MGP_LPJ_T0065559.1 MGP_LPJ_G0028204.1 mouse_genomes_project 4 49869281 49880650 + Cylc2 protein_coding processed_transcript MGP_LPJ_T0065560.1 MGP_LPJ_G0028204.1 mouse_genomes_project 4 49869281 49882622 + MGP_LPJ_P0065560 Cylc2 protein_coding protein_coding MGP_LPJ_T0007899.1 MGP_LPJ_G0006459.1 mouse_genomes_project 4 84744161 84744978 + Gm12415 lincRNA lincRNA MGP_LPJ_T0014433.1 MGP_LPJ_G0012524.1 mouse_genomes_project 4 26011642 26011906 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007933.1 MGP_LPJ_G0006486.1 mouse_genomes_project 4 107693374 107699553 - Gm12746 lincRNA lincRNA MGP_LPJ_T0066588.1 MGP_LPJ_G0028455.1 mouse_genomes_project 4 108565060 108573775 - MGP_LPJ_P0066588 Dmrtb1 protein_coding protein_coding MGP_LPJ_T0066589.1 MGP_LPJ_G0028455.1 mouse_genomes_project 4 108565062 108574425 - MGP_LPJ_P0066589 Dmrtb1 protein_coding protein_coding MGP_LPJ_T0066590.1 MGP_LPJ_G0028455.1 mouse_genomes_project 4 108565674 108571151 - Dmrtb1 protein_coding retained_intron MGP_LPJ_T0017989.1 MGP_LPJ_G0015457.1 mouse_genomes_project 4 32946226 32955928 + Gm12367 processed_transcript processed_transcript MGP_LPJ_T0017990.1 MGP_LPJ_G0015457.1 mouse_genomes_project 4 32946244 32956026 + Gm12367 processed_transcript processed_transcript MGP_LPJ_T0017991.1 MGP_LPJ_G0015457.1 mouse_genomes_project 4 32946261 32981635 + Gm12367 processed_transcript processed_transcript MGP_LPJ_T0014631.1 MGP_LPJ_G0012722.1 mouse_genomes_project 4 100180781 100181487 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102159.1 MGP_LPJ_G0040196.1 mouse_genomes_project 4 122818414 122821907 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0068381.1 MGP_LPJ_G0028848.1 mouse_genomes_project 4 137431174 137437715 + MGP_LPJ_P0068381 Syf2 protein_coding protein_coding MGP_LPJ_T0068382.1 MGP_LPJ_G0028848.1 mouse_genomes_project 4 137431178 137435326 + Syf2 protein_coding retained_intron MGP_LPJ_T0068383.1 MGP_LPJ_G0028848.1 mouse_genomes_project 4 137431286 137436355 + Syf2 protein_coding retained_intron MGP_LPJ_T0017992.1 MGP_LPJ_G0015458.1 mouse_genomes_project 4 39548734 39553864 + Gm12404 processed_transcript processed_transcript MGP_LPJ_T0065706.1 MGP_LPJ_G0028244.1 mouse_genomes_project 4 57929328 57950982 - MGP_LPJ_P0065706 Ptgr1 protein_coding protein_coding MGP_LPJ_T0064975.1 MGP_LPJ_G0028083.1 mouse_genomes_project 4 39489258 39505024 + MGP_LPJ_P0064975 Nudt2 protein_coding protein_coding MGP_LPJ_T0008044.1 MGP_LPJ_G0006567.1 mouse_genomes_project 4 157253296 157254650 - Gm13173 lincRNA lincRNA MGP_LPJ_T0014493.1 MGP_LPJ_G0012584.1 mouse_genomes_project 4 47494114 47494452 + processed_pseudogene processed_pseudogene MGP_LPJ_T0066184.1 MGP_LPJ_G0028370.1 mouse_genomes_project 4 95953639 96335204 + MGP_LPJ_P0066184 Fggy protein_coding protein_coding MGP_LPJ_T0066185.1 MGP_LPJ_G0028370.1 mouse_genomes_project 4 95953643 96246362 + Fggy protein_coding processed_transcript MGP_LPJ_T0066186.1 MGP_LPJ_G0028370.1 mouse_genomes_project 4 95953651 96335200 + Fggy protein_coding processed_transcript MGP_LPJ_T0066187.1 MGP_LPJ_G0028370.1 mouse_genomes_project 4 95953652 95991979 + MGP_LPJ_P0066187 Fggy protein_coding protein_coding MGP_LPJ_T0066188.1 MGP_LPJ_G0028370.1 mouse_genomes_project 4 95975501 96227870 + MGP_LPJ_P0066188 Fggy protein_coding protein_coding MGP_LPJ_T0066189.1 MGP_LPJ_G0028370.1 mouse_genomes_project 4 95975564 95995382 + Fggy protein_coding processed_transcript MGP_LPJ_T0066190.1 MGP_LPJ_G0028370.1 mouse_genomes_project 4 95975569 95991985 + MGP_LPJ_P0066190 Fggy protein_coding protein_coding MGP_LPJ_T0066191.1 MGP_LPJ_G0028370.1 mouse_genomes_project 4 95975574 96174014 + MGP_LPJ_P0066191 Fggy protein_coding protein_coding MGP_LPJ_T0066192.1 MGP_LPJ_G0028370.1 mouse_genomes_project 4 95981324 96335069 + MGP_LPJ_P0066192 Fggy protein_coding protein_coding MGP_LPJ_T0066193.1 MGP_LPJ_G0028370.1 mouse_genomes_project 4 95981324 96216804 + MGP_LPJ_P0066193 Fggy protein_coding nonsense_mediated_decay MGP_LPJ_T0066194.1 MGP_LPJ_G0028370.1 mouse_genomes_project 4 95982995 96143372 + Fggy protein_coding processed_transcript MGP_LPJ_T0066195.1 MGP_LPJ_G0028370.1 mouse_genomes_project 4 96019010 96282746 + Fggy protein_coding processed_transcript MGP_LPJ_T0066196.1 MGP_LPJ_G0028370.1 mouse_genomes_project 4 96019017 96143429 + MGP_LPJ_P0066196 Fggy protein_coding nonsense_mediated_decay MGP_LPJ_T0066197.1 MGP_LPJ_G0028370.1 mouse_genomes_project 4 96032348 96228283 + Fggy protein_coding processed_transcript MGP_LPJ_T0066198.1 MGP_LPJ_G0028370.1 mouse_genomes_project 4 96142914 96174023 + Fggy protein_coding processed_transcript MGP_LPJ_T0066199.1 MGP_LPJ_G0028370.1 mouse_genomes_project 4 96174086 96335204 + MGP_LPJ_P0066199 Fggy protein_coding protein_coding MGP_LPJ_T0066200.1 MGP_LPJ_G0028370.1 mouse_genomes_project 4 96228278 96335069 + MGP_LPJ_P0066200 Fggy protein_coding protein_coding MGP_LPJ_T0066201.1 MGP_LPJ_G0028370.1 mouse_genomes_project 4 96255328 96335199 + MGP_LPJ_P0066201 Fggy protein_coding nonsense_mediated_decay MGP_LPJ_T0065267.1 MGP_LPJ_G0028134.1 mouse_genomes_project 4 41881407 41889377 - MGP_LPJ_P0065267 Olfr70 protein_coding protein_coding MGP_LPJ_T0014779.1 MGP_LPJ_G0012870.1 mouse_genomes_project 4 153269467 153269886 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014453.1 MGP_LPJ_G0012544.1 mouse_genomes_project 4 32132051 32132343 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099500.1 MGP_LPJ_G0037763.1 mouse_genomes_project 4 98861204 98861294 - Gm24960 snRNA snRNA MGP_LPJ_T0069053.1 MGP_LPJ_G0029026.1 mouse_genomes_project 4 152119822 152131002 - MGP_LPJ_P0069053 Ubiad1 protein_coding protein_coding MGP_LPJ_T0069054.1 MGP_LPJ_G0029026.1 mouse_genomes_project 4 152121817 152130992 - Ubiad1 protein_coding processed_transcript MGP_LPJ_T0010638.1 MGP_LPJ_G0008756.1 mouse_genomes_project 4 122184153 122184245 + Mir30f miRNA miRNA MGP_LPJ_T0065980.1 MGP_LPJ_G0028316.1 mouse_genomes_project 4 83150615 83270838 - MGP_LPJ_P0065980 Ttc39b protein_coding protein_coding MGP_LPJ_T0065981.1 MGP_LPJ_G0028316.1 mouse_genomes_project 4 83156747 83163497 - Ttc39b protein_coding retained_intron MGP_LPJ_T0065982.1 MGP_LPJ_G0028316.1 mouse_genomes_project 4 83170105 83270822 - MGP_LPJ_P0065982 Ttc39b protein_coding protein_coding MGP_LPJ_T0065983.1 MGP_LPJ_G0028316.1 mouse_genomes_project 4 83177829 83197368 - Ttc39b protein_coding processed_transcript MGP_LPJ_T0065984.1 MGP_LPJ_G0028316.1 mouse_genomes_project 4 83183202 83217824 - MGP_LPJ_P0065984 Ttc39b protein_coding protein_coding MGP_LPJ_T0065985.1 MGP_LPJ_G0028316.1 mouse_genomes_project 4 83190555 83270772 - MGP_LPJ_P0065985 Ttc39b protein_coding protein_coding MGP_LPJ_T0065986.1 MGP_LPJ_G0028316.1 mouse_genomes_project 4 83190686 83212097 - MGP_LPJ_P0065986 Ttc39b protein_coding protein_coding MGP_LPJ_T0065082.1 MGP_LPJ_G0028109.1 mouse_genomes_project 4 41149659 41159148 - Fancg protein_coding retained_intron MGP_LPJ_T0065083.1 MGP_LPJ_G0028109.1 mouse_genomes_project 4 41149659 41159015 - MGP_LPJ_P0065083 Fancg protein_coding protein_coding MGP_LPJ_T0065084.1 MGP_LPJ_G0028109.1 mouse_genomes_project 4 41150238 41151249 - Fancg protein_coding retained_intron MGP_LPJ_T0065085.1 MGP_LPJ_G0028109.1 mouse_genomes_project 4 41150327 41155132 - Fancg protein_coding processed_transcript MGP_LPJ_T0065086.1 MGP_LPJ_G0028109.1 mouse_genomes_project 4 41150576 41155177 - Fancg protein_coding processed_transcript MGP_LPJ_T0065087.1 MGP_LPJ_G0028109.1 mouse_genomes_project 4 41151229 41155445 - Fancg protein_coding processed_transcript MGP_LPJ_T0065088.1 MGP_LPJ_G0028109.1 mouse_genomes_project 4 41153886 41157819 - Fancg protein_coding processed_transcript MGP_LPJ_T0065089.1 MGP_LPJ_G0028109.1 mouse_genomes_project 4 41157732 41158830 - Fancg protein_coding retained_intron MGP_LPJ_T0065090.1 MGP_LPJ_G0028109.1 mouse_genomes_project 4 41157823 41158882 - Fancg protein_coding retained_intron MGP_LPJ_T0065091.1 MGP_LPJ_G0028109.1 mouse_genomes_project 4 41158702 41159166 - Fancg protein_coding processed_transcript MGP_LPJ_T0018019.1 MGP_LPJ_G0015478.1 mouse_genomes_project 4 98199229 98202420 - Gm12676 processed_transcript processed_transcript MGP_LPJ_T0014641.1 MGP_LPJ_G0012732.1 mouse_genomes_project 4 104235664 104237018 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065781.1 MGP_LPJ_G0028267.1 mouse_genomes_project 4 61740915 61758764 + MGP_LPJ_P0065781 Bspry protein_coding protein_coding MGP_LPJ_T0065782.1 MGP_LPJ_G0028267.1 mouse_genomes_project 4 61740915 61758764 + MGP_LPJ_P0065782 Bspry protein_coding protein_coding MGP_LPJ_T0065783.1 MGP_LPJ_G0028267.1 mouse_genomes_project 4 61740951 61747249 + MGP_LPJ_P0065783 Bspry protein_coding nonsense_mediated_decay MGP_LPJ_T0014648.1 MGP_LPJ_G0012739.1 mouse_genomes_project 4 106884302 106886039 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099519.1 MGP_LPJ_G0037782.1 mouse_genomes_project 4 122323411 122323515 + Gm24678 snRNA snRNA MGP_LPJ_T0067413.1 MGP_LPJ_G0028631.1 mouse_genomes_project 4 122463524 122479441 + MGP_LPJ_P0067413 Col9a2 protein_coding protein_coding MGP_LPJ_T0067414.1 MGP_LPJ_G0028631.1 mouse_genomes_project 4 122463887 122468477 + Col9a2 protein_coding retained_intron MGP_LPJ_T0067415.1 MGP_LPJ_G0028631.1 mouse_genomes_project 4 122477117 122478938 + Col9a2 protein_coding processed_transcript MGP_LPJ_T0007906.1 MGP_LPJ_G0006464.1 mouse_genomes_project 4 91925793 91930556 + Gm12670 lincRNA lincRNA MGP_LPJ_T0014547.1 MGP_LPJ_G0012638.1 mouse_genomes_project 4 69549087 69550118 + processed_pseudogene processed_pseudogene MGP_LPJ_T0065067.1 MGP_LPJ_G0028106.1 mouse_genomes_project 4 41095652 41096483 + Dnajb5 protein_coding processed_transcript MGP_LPJ_T0065068.1 MGP_LPJ_G0028106.1 mouse_genomes_project 4 41096089 41104484 + Dnajb5 protein_coding retained_intron MGP_LPJ_T0065069.1 MGP_LPJ_G0028106.1 mouse_genomes_project 4 41096178 41099041 + Dnajb5 protein_coding processed_transcript MGP_LPJ_T0065070.1 MGP_LPJ_G0028106.1 mouse_genomes_project 4 41096500 41104490 + MGP_LPJ_P0065070 Dnajb5 protein_coding protein_coding MGP_LPJ_T0065071.1 MGP_LPJ_G0028106.1 mouse_genomes_project 4 41098832 41104475 + MGP_LPJ_P0065071 Dnajb5 protein_coding protein_coding MGP_LPJ_T0014430.1 MGP_LPJ_G0012521.1 mouse_genomes_project 4 25900585 25900932 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102153.1 MGP_LPJ_G0040190.1 mouse_genomes_project 4 116142239 116143285 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0069249.1 MGP_LPJ_G0029063.1 mouse_genomes_project 4 154959366 154964073 + MGP_LPJ_P0069249 Uts2 protein_coding protein_coding MGP_LPJ_T0100776.1 MGP_LPJ_G0039039.1 mouse_genomes_project 4 79083217 79083340 - Gm25836 snoRNA snoRNA MGP_LPJ_T0007834.1 MGP_LPJ_G0006403.1 mouse_genomes_project 4 21645215 21645730 - Gm27243 lincRNA lincRNA MGP_LPJ_T0066213.1 MGP_LPJ_G0028372.1 mouse_genomes_project 4 96442183 96470567 - MGP_LPJ_P0066213 Cyp2j13 protein_coding protein_coding MGP_LPJ_T0066214.1 MGP_LPJ_G0028372.1 mouse_genomes_project 4 96457151 96485525 - MGP_LPJ_P0066214 Cyp2j13 protein_coding protein_coding MGP_LPJ_T0066215.1 MGP_LPJ_G0028372.1 mouse_genomes_project 4 96459722 96485531 - MGP_LPJ_P0066215 Cyp2j13 protein_coding protein_coding MGP_LPJ_T0066216.1 MGP_LPJ_G0028372.1 mouse_genomes_project 4 96459722 96485509 - MGP_LPJ_P0066216 Cyp2j13 protein_coding protein_coding MGP_LPJ_T0014401.1 MGP_LPJ_G0012492.1 mouse_genomes_project 4 17963365 17963565 - processed_pseudogene processed_pseudogene MGP_LPJ_T0066644.1 MGP_LPJ_G0028463.1 mouse_genomes_project 4 109087901 109101828 + MGP_LPJ_P0066644 Echdc2 protein_coding protein_coding MGP_LPJ_T0066645.1 MGP_LPJ_G0028463.1 mouse_genomes_project 4 109087930 109101591 + MGP_LPJ_P0066645 Echdc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0066646.1 MGP_LPJ_G0028463.1 mouse_genomes_project 4 109087930 109101827 + MGP_LPJ_P0066646 Echdc2 protein_coding protein_coding MGP_LPJ_T0066647.1 MGP_LPJ_G0028463.1 mouse_genomes_project 4 109087952 109101826 + MGP_LPJ_P0066647 Echdc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0066648.1 MGP_LPJ_G0028463.1 mouse_genomes_project 4 109087982 109101588 + MGP_LPJ_P0066648 Echdc2 protein_coding protein_coding MGP_LPJ_T0066649.1 MGP_LPJ_G0028463.1 mouse_genomes_project 4 109092229 109101452 + MGP_LPJ_P0066649 Echdc2 protein_coding protein_coding MGP_LPJ_T0066650.1 MGP_LPJ_G0028463.1 mouse_genomes_project 4 109092301 109097924 + Echdc2 protein_coding retained_intron MGP_LPJ_T0066651.1 MGP_LPJ_G0028463.1 mouse_genomes_project 4 109092657 109101827 + Echdc2 protein_coding processed_transcript MGP_LPJ_T0066652.1 MGP_LPJ_G0028463.1 mouse_genomes_project 4 109092668 109096368 + Echdc2 protein_coding processed_transcript MGP_LPJ_T0066653.1 MGP_LPJ_G0028463.1 mouse_genomes_project 4 109094676 109101679 + MGP_LPJ_P0066653 Echdc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0066654.1 MGP_LPJ_G0028463.1 mouse_genomes_project 4 109095179 109099619 + Echdc2 protein_coding retained_intron MGP_LPJ_T0066655.1 MGP_LPJ_G0028463.1 mouse_genomes_project 4 109096206 109101579 + Echdc2 protein_coding retained_intron MGP_LPJ_T0066656.1 MGP_LPJ_G0028463.1 mouse_genomes_project 4 109096326 109101608 + MGP_LPJ_P0066656 Echdc2 protein_coding protein_coding MGP_LPJ_T0065601.1 MGP_LPJ_G0028217.1 mouse_genomes_project 4 52535873 52546506 + MGP_LPJ_P0065601 Tal2 protein_coding protein_coding MGP_LPJ_T0064742.1 MGP_LPJ_G0028029.1 mouse_genomes_project 4 23566809 23593407 - MGP_LPJ_P0064742 Manea protein_coding protein_coding MGP_LPJ_T0064743.1 MGP_LPJ_G0028029.1 mouse_genomes_project 4 23570339 23587544 - Manea protein_coding processed_transcript MGP_LPJ_T0064744.1 MGP_LPJ_G0028029.1 mouse_genomes_project 4 23587108 23593370 - Manea protein_coding processed_transcript MGP_LPJ_T0064745.1 MGP_LPJ_G0028029.1 mouse_genomes_project 4 23587399 23593407 - MGP_LPJ_P0064745 Manea protein_coding protein_coding MGP_LPJ_T0065072.1 MGP_LPJ_G0028107.1 mouse_genomes_project 4 41115355 41117084 + 1700022I11Rik protein_coding processed_transcript MGP_LPJ_T0065073.1 MGP_LPJ_G0028107.1 mouse_genomes_project 4 41115382 41117050 + MGP_LPJ_P0065073 1700022I11Rik protein_coding protein_coding MGP_LPJ_T0065074.1 MGP_LPJ_G0028107.1 mouse_genomes_project 4 41115685 41117240 + MGP_LPJ_P0065074 1700022I11Rik protein_coding protein_coding MGP_LPJ_T0065075.1 MGP_LPJ_G0028107.1 mouse_genomes_project 4 41115697 41129438 + MGP_LPJ_P0065075 1700022I11Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0065076.1 MGP_LPJ_G0028107.1 mouse_genomes_project 4 41115697 41120078 + MGP_LPJ_P0065076 1700022I11Rik protein_coding protein_coding MGP_LPJ_T0099527.1 MGP_LPJ_G0037790.1 mouse_genomes_project 4 132166496 132166648 + Gm23845 snRNA snRNA MGP_LPJ_T0099509.1 MGP_LPJ_G0037772.1 mouse_genomes_project 4 109528645 109528752 - Gm22345 snRNA snRNA MGP_LPJ_T0100801.1 MGP_LPJ_G0039064.1 mouse_genomes_project 4 132930497 132930570 + Snord85 snoRNA snoRNA MGP_LPJ_T0068077.1 MGP_LPJ_G0028781.1 mouse_genomes_project 4 134631634 134645342 - MGP_LPJ_P0068077 Rcc1 protein_coding protein_coding MGP_LPJ_T0068078.1 MGP_LPJ_G0028781.1 mouse_genomes_project 4 134631638 134645300 - MGP_LPJ_P0068078 Rcc1 protein_coding protein_coding MGP_LPJ_T0068079.1 MGP_LPJ_G0028781.1 mouse_genomes_project 4 134631638 134653343 - MGP_LPJ_P0068079 Rcc1 protein_coding protein_coding MGP_LPJ_T0068080.1 MGP_LPJ_G0028781.1 mouse_genomes_project 4 134637251 134639528 - Rcc1 protein_coding processed_transcript MGP_LPJ_T0068081.1 MGP_LPJ_G0028781.1 mouse_genomes_project 4 134637418 134655445 - MGP_LPJ_P0068081 Rcc1 protein_coding protein_coding MGP_LPJ_T0068082.1 MGP_LPJ_G0028781.1 mouse_genomes_project 4 134638310 134645296 - Rcc1 protein_coding retained_intron MGP_LPJ_T0068083.1 MGP_LPJ_G0028781.1 mouse_genomes_project 4 134638556 134644952 - Rcc1 protein_coding retained_intron MGP_LPJ_T0068084.1 MGP_LPJ_G0028781.1 mouse_genomes_project 4 134639087 134645287 - Rcc1 protein_coding retained_intron MGP_LPJ_T0065273.1 MGP_LPJ_G0028139.1 mouse_genomes_project 4 42038567 42039524 - MGP_LPJ_P0065273 Olfr157 protein_coding protein_coding MGP_LPJ_T0001444.1 MGP_LPJ_G0001363.1 mouse_genomes_project 4 99928750 99938353 - TEC TEC MGP_LPJ_T0014458.1 MGP_LPJ_G0012549.1 mouse_genomes_project 4 33160078 33160646 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098599.1 MGP_LPJ_G0036873.1 mouse_genomes_project 4 82518434 82522099 - Gm11267 sense_intronic sense_intronic MGP_LPJ_T0004490.1 MGP_LPJ_G0003913.1 mouse_genomes_project 4 82437218 82478309 + Gm11266 antisense antisense MGP_LPJ_T0067464.1 MGP_LPJ_G0028650.1 mouse_genomes_project 4 124936941 124953903 + MGP_LPJ_P0067464 Heyl protein_coding protein_coding MGP_LPJ_T0067465.1 MGP_LPJ_G0028650.1 mouse_genomes_project 4 124937238 124944048 + Heyl protein_coding processed_transcript MGP_LPJ_T0067466.1 MGP_LPJ_G0028650.1 mouse_genomes_project 4 124943145 124950018 + Heyl protein_coding processed_transcript MGP_LPJ_T0098377.1 MGP_LPJ_G0036658.1 mouse_genomes_project 4 18359715 18360071 + Gm22817 ribozyme ribozyme MGP_LPJ_T0068643.1 MGP_LPJ_G0028905.1 mouse_genomes_project 4 141149669 141154895 - Cda protein_coding retained_intron MGP_LPJ_T0068644.1 MGP_LPJ_G0028905.1 mouse_genomes_project 4 141149773 141180051 - MGP_LPJ_P0068644 Cda protein_coding protein_coding MGP_LPJ_T0066334.1 MGP_LPJ_G0028404.1 mouse_genomes_project 4 101734950 101856679 - MGP_LPJ_P0066334 Jak1 protein_coding protein_coding MGP_LPJ_T0066335.1 MGP_LPJ_G0028404.1 mouse_genomes_project 4 101736832 101737703 - Jak1 protein_coding processed_transcript MGP_LPJ_T0066336.1 MGP_LPJ_G0028404.1 mouse_genomes_project 4 101763149 101768975 - Jak1 protein_coding processed_transcript MGP_LPJ_T0066337.1 MGP_LPJ_G0028404.1 mouse_genomes_project 4 101764577 101769000 - Jak1 protein_coding processed_transcript MGP_LPJ_T0066338.1 MGP_LPJ_G0028404.1 mouse_genomes_project 4 101765430 101856678 - Jak1 protein_coding processed_transcript MGP_LPJ_T0066339.1 MGP_LPJ_G0028404.1 mouse_genomes_project 4 101765470 101856620 - Jak1 protein_coding processed_transcript MGP_LPJ_T0066340.1 MGP_LPJ_G0028404.1 mouse_genomes_project 4 101775175 101856670 - MGP_LPJ_P0066340 Jak1 protein_coding protein_coding MGP_LPJ_T0066341.1 MGP_LPJ_G0028404.1 mouse_genomes_project 4 101781387 101856623 - Jak1 protein_coding processed_transcript MGP_LPJ_T0007857.1 MGP_LPJ_G0006425.1 mouse_genomes_project 4 50640610 50725124 - C630028M04Rik lincRNA lincRNA MGP_LPJ_T0065259.1 MGP_LPJ_G0028132.1 mouse_genomes_project 4 41845174 41855584 - MGP_LPJ_P0065259 Fam221b protein_coding protein_coding MGP_LPJ_T0065260.1 MGP_LPJ_G0028132.1 mouse_genomes_project 4 41848648 41855588 - Fam221b protein_coding retained_intron MGP_LPJ_T0014610.1 MGP_LPJ_G0012701.1 mouse_genomes_project 4 93409286 93412216 + processed_pseudogene processed_pseudogene MGP_LPJ_T0064567.1 MGP_LPJ_G0027978.1 mouse_genomes_project 4 8236823 8303718 + MGP_LPJ_P0064567 1110037F02Rik protein_coding protein_coding MGP_LPJ_T0064568.1 MGP_LPJ_G0027978.1 mouse_genomes_project 4 8236823 8279409 + MGP_LPJ_P0064568 1110037F02Rik protein_coding protein_coding MGP_LPJ_T0064569.1 MGP_LPJ_G0027978.1 mouse_genomes_project 4 8236908 8303718 + MGP_LPJ_P0064569 1110037F02Rik protein_coding protein_coding MGP_LPJ_T0004557.1 MGP_LPJ_G0003960.1 mouse_genomes_project 4 126817234 126849752 - Gm12930 antisense antisense MGP_LPJ_T0069473.1 MGP_LPJ_G0029101.1 mouse_genomes_project 4 158873157 158874592 - MGP_LPJ_P0069473 Actrt2 protein_coding protein_coding MGP_LPJ_T0007895.1 MGP_LPJ_G0006455.1 mouse_genomes_project 4 83343709 83357532 + lincRNA lincRNA MGP_LPJ_T0064816.1 MGP_LPJ_G0028046.1 mouse_genomes_project 4 31575685 31586260 + Cnr1 protein_coding processed_transcript MGP_LPJ_T0064817.1 MGP_LPJ_G0028046.1 mouse_genomes_project 4 31575724 31599766 + MGP_LPJ_P0064817 Cnr1 protein_coding protein_coding MGP_LPJ_T0064818.1 MGP_LPJ_G0028046.1 mouse_genomes_project 4 31577294 31599754 + MGP_LPJ_P0064818 Cnr1 protein_coding protein_coding MGP_LPJ_T0066431.1 MGP_LPJ_G0028422.1 mouse_genomes_project 4 104009021 104057810 + MGP_LPJ_P0066431 Oma1 protein_coding protein_coding MGP_LPJ_T0066432.1 MGP_LPJ_G0028422.1 mouse_genomes_project 4 104019643 104023936 + Oma1 protein_coding processed_transcript MGP_LPJ_T0066433.1 MGP_LPJ_G0028422.1 mouse_genomes_project 4 104023954 104063228 + Oma1 protein_coding processed_transcript MGP_LPJ_T0069144.1 MGP_LPJ_G0029043.1 mouse_genomes_project 4 153235449 153253390 - MGP_LPJ_P0069144 Nmnat1 protein_coding protein_coding MGP_LPJ_T0069145.1 MGP_LPJ_G0029043.1 mouse_genomes_project 4 153236372 153253386 - MGP_LPJ_P0069145 Nmnat1 protein_coding protein_coding MGP_LPJ_T0069146.1 MGP_LPJ_G0029043.1 mouse_genomes_project 4 153236412 153253360 - MGP_LPJ_P0069146 Nmnat1 protein_coding protein_coding MGP_LPJ_T0069147.1 MGP_LPJ_G0029043.1 mouse_genomes_project 4 153242185 153253351 - MGP_LPJ_P0069147 Nmnat1 protein_coding protein_coding MGP_LPJ_T0004529.1 MGP_LPJ_G0003937.1 mouse_genomes_project 4 111053052 111054127 - Dmrta2os antisense antisense MGP_LPJ_T0004530.1 MGP_LPJ_G0003937.1 mouse_genomes_project 4 111053061 111053805 - Dmrta2os antisense antisense MGP_LPJ_T0014508.1 MGP_LPJ_G0012599.1 mouse_genomes_project 4 51616844 51618880 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100810.1 MGP_LPJ_G0039073.1 mouse_genomes_project 4 134609194 134609268 + Snord99 snoRNA snoRNA MGP_LPJ_T0100780.1 MGP_LPJ_G0039043.1 mouse_genomes_project 4 91281063 91281195 - Gm25244 snoRNA snoRNA MGP_LPJ_T0067983.1 MGP_LPJ_G0028765.1 mouse_genomes_project 4 132838627 132970053 + MGP_LPJ_P0067983 Pum1 protein_coding protein_coding MGP_LPJ_T0067984.1 MGP_LPJ_G0028765.1 mouse_genomes_project 4 132838665 132970051 + MGP_LPJ_P0067984 Pum1 protein_coding protein_coding MGP_LPJ_T0067985.1 MGP_LPJ_G0028765.1 mouse_genomes_project 4 132838665 132970051 + MGP_LPJ_P0067985 Pum1 protein_coding protein_coding MGP_LPJ_T0067986.1 MGP_LPJ_G0028765.1 mouse_genomes_project 4 132838672 132899730 + Pum1 protein_coding retained_intron MGP_LPJ_T0067987.1 MGP_LPJ_G0028765.1 mouse_genomes_project 4 132838673 132927866 + MGP_LPJ_P0067987 Pum1 protein_coding protein_coding MGP_LPJ_T0067988.1 MGP_LPJ_G0028765.1 mouse_genomes_project 4 132838692 132968755 + MGP_LPJ_P0067988 Pum1 protein_coding protein_coding MGP_LPJ_T0067989.1 MGP_LPJ_G0028765.1 mouse_genomes_project 4 132838712 132968743 + MGP_LPJ_P0067989 Pum1 protein_coding protein_coding MGP_LPJ_T0100769.1 MGP_LPJ_G0039032.1 mouse_genomes_project 4 65921418 65921551 + Gm25480 snoRNA snoRNA MGP_LPJ_T0065181.1 MGP_LPJ_G0028120.1 mouse_genomes_project 4 41661955 41663261 + Ccdc107 protein_coding processed_transcript MGP_LPJ_T0065182.1 MGP_LPJ_G0028120.1 mouse_genomes_project 4 41662417 41664977 + MGP_LPJ_P0065182 Ccdc107 protein_coding protein_coding MGP_LPJ_T0065183.1 MGP_LPJ_G0028120.1 mouse_genomes_project 4 41662432 41662866 + Ccdc107 protein_coding processed_transcript MGP_LPJ_T0065184.1 MGP_LPJ_G0028120.1 mouse_genomes_project 4 41662444 41664977 + MGP_LPJ_P0065184 Ccdc107 protein_coding protein_coding MGP_LPJ_T0065185.1 MGP_LPJ_G0028120.1 mouse_genomes_project 4 41662472 41664920 + Ccdc107 protein_coding processed_transcript MGP_LPJ_T0065186.1 MGP_LPJ_G0028120.1 mouse_genomes_project 4 41662472 41664927 + Ccdc107 protein_coding processed_transcript MGP_LPJ_T0065371.1 MGP_LPJ_G0028155.1 mouse_genomes_project 4 43457200 43540584 + MGP_LPJ_P0065371 Frmpd1 protein_coding protein_coding MGP_LPJ_T0065372.1 MGP_LPJ_G0028155.1 mouse_genomes_project 4 43457231 43564551 + MGP_LPJ_P0065372 Frmpd1 protein_coding protein_coding MGP_LPJ_T0065373.1 MGP_LPJ_G0028155.1 mouse_genomes_project 4 43477211 43564551 + MGP_LPJ_P0065373 Frmpd1 protein_coding protein_coding MGP_LPJ_T0068942.1 MGP_LPJ_G0028988.1 mouse_genomes_project 4 147196359 147235218 + MGP_LPJ_P0068942 protein_coding protein_coding MGP_LPJ_T0065098.1 MGP_LPJ_G0028111.1 mouse_genomes_project 4 41177203 41181224 - MGP_LPJ_P0065098 Stoml2 protein_coding protein_coding MGP_LPJ_T0065099.1 MGP_LPJ_G0028111.1 mouse_genomes_project 4 41177539 41179351 - Stoml2 protein_coding processed_transcript MGP_LPJ_T0065100.1 MGP_LPJ_G0028111.1 mouse_genomes_project 4 41177555 41179428 - Stoml2 protein_coding processed_transcript MGP_LPJ_T0065101.1 MGP_LPJ_G0028111.1 mouse_genomes_project 4 41177742 41180970 - MGP_LPJ_P0065101 Stoml2 protein_coding protein_coding MGP_LPJ_T0065102.1 MGP_LPJ_G0028111.1 mouse_genomes_project 4 41177754 41180107 - MGP_LPJ_P0065102 Stoml2 protein_coding protein_coding MGP_LPJ_T0065103.1 MGP_LPJ_G0028111.1 mouse_genomes_project 4 41179077 41180964 - Stoml2 protein_coding processed_transcript MGP_LPJ_T0065104.1 MGP_LPJ_G0028111.1 mouse_genomes_project 4 41179110 41180884 - MGP_LPJ_P0065104 Stoml2 protein_coding protein_coding MGP_LPJ_T0065105.1 MGP_LPJ_G0028111.1 mouse_genomes_project 4 41179128 41180013 - Stoml2 protein_coding processed_transcript MGP_LPJ_T0065106.1 MGP_LPJ_G0028111.1 mouse_genomes_project 4 41179286 41180114 - Stoml2 protein_coding processed_transcript MGP_LPJ_T0065107.1 MGP_LPJ_G0028111.1 mouse_genomes_project 4 41179554 41180872 - Stoml2 protein_coding processed_transcript MGP_LPJ_T0065108.1 MGP_LPJ_G0028111.1 mouse_genomes_project 4 41180006 41180950 - Stoml2 protein_coding processed_transcript MGP_LPJ_T0068132.1 MGP_LPJ_G0028792.1 mouse_genomes_project 4 135116840 135132071 - MGP_LPJ_P0068132 Themis2 protein_coding protein_coding MGP_LPJ_T0004444.1 MGP_LPJ_G0003874.1 mouse_genomes_project 4 6088783 6104143 - Gm11817 antisense antisense MGP_LPJ_T0004520.1 MGP_LPJ_G0003933.1 mouse_genomes_project 4 108705018 108721863 - Lrp8os2 antisense antisense MGP_LPJ_T0004521.1 MGP_LPJ_G0003933.1 mouse_genomes_project 4 108705018 108709914 - Lrp8os2 antisense antisense MGP_LPJ_T0004522.1 MGP_LPJ_G0003933.1 mouse_genomes_project 4 108706973 108721815 - Lrp8os2 antisense antisense MGP_LPJ_T0004523.1 MGP_LPJ_G0003933.1 mouse_genomes_project 4 108709773 108721851 - Lrp8os2 antisense antisense MGP_LPJ_T0014699.1 MGP_LPJ_G0012790.1 mouse_genomes_project 4 120881391 120881794 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065937.1 MGP_LPJ_G0028309.1 mouse_genomes_project 4 80710901 80714425 + MGP_LPJ_P0065937 Tyrp1 protein_coding protein_coding MGP_LPJ_T0065938.1 MGP_LPJ_G0028309.1 mouse_genomes_project 4 80711008 80728518 + MGP_LPJ_P0065938 Tyrp1 protein_coding protein_coding MGP_LPJ_T0065939.1 MGP_LPJ_G0028309.1 mouse_genomes_project 4 80711085 80728519 + MGP_LPJ_P0065939 Tyrp1 protein_coding protein_coding MGP_LPJ_T0065940.1 MGP_LPJ_G0028309.1 mouse_genomes_project 4 80723320 80727800 + MGP_LPJ_P0065940 Tyrp1 protein_coding protein_coding MGP_LPJ_T0004568.1 MGP_LPJ_G0003968.1 mouse_genomes_project 4 133003615 133004287 - Gm12970 antisense antisense MGP_LPJ_T0099505.1 MGP_LPJ_G0037768.1 mouse_genomes_project 4 108956058 108956162 - Gm23354 snRNA snRNA MGP_LPJ_T0067352.1 MGP_LPJ_G0028616.1 mouse_genomes_project 4 120982979 120986115 - MGP_LPJ_P0067352 Guca2b protein_coding protein_coding MGP_LPJ_T0067353.1 MGP_LPJ_G0028616.1 mouse_genomes_project 4 120982979 120986288 - MGP_LPJ_P0067353 Guca2b protein_coding protein_coding MGP_LPJ_T0068356.1 MGP_LPJ_G0028841.1 mouse_genomes_project 4 137011771 137026120 - MGP_LPJ_P0068356 Sepn1 protein_coding protein_coding MGP_LPJ_T0068357.1 MGP_LPJ_G0028841.1 mouse_genomes_project 4 137013458 137014909 - Sepn1 protein_coding processed_transcript MGP_LPJ_T0069373.1 MGP_LPJ_G0029085.1 mouse_genomes_project 4 156436473 156497799 - MGP_LPJ_P0069373 Kcnab2 protein_coding protein_coding MGP_LPJ_T0069374.1 MGP_LPJ_G0029085.1 mouse_genomes_project 4 156436475 156526713 - MGP_LPJ_P0069374 Kcnab2 protein_coding protein_coding MGP_LPJ_T0069375.1 MGP_LPJ_G0029085.1 mouse_genomes_project 4 156436476 156526367 - MGP_LPJ_P0069375 Kcnab2 protein_coding protein_coding MGP_LPJ_T0069376.1 MGP_LPJ_G0029085.1 mouse_genomes_project 4 156438452 156526275 - MGP_LPJ_P0069376 Kcnab2 protein_coding protein_coding MGP_LPJ_T0069377.1 MGP_LPJ_G0029085.1 mouse_genomes_project 4 156438513 156497799 - MGP_LPJ_P0069377 Kcnab2 protein_coding protein_coding MGP_LPJ_T0069378.1 MGP_LPJ_G0029085.1 mouse_genomes_project 4 156440719 156469624 - Kcnab2 protein_coding processed_transcript MGP_LPJ_T0069379.1 MGP_LPJ_G0029085.1 mouse_genomes_project 4 156446563 156477528 - Kcnab2 protein_coding processed_transcript MGP_LPJ_T0069380.1 MGP_LPJ_G0029085.1 mouse_genomes_project 4 156447483 156504003 - MGP_LPJ_P0069380 Kcnab2 protein_coding protein_coding MGP_LPJ_T0069381.1 MGP_LPJ_G0029085.1 mouse_genomes_project 4 156448583 156497700 - Kcnab2 protein_coding processed_transcript MGP_LPJ_T0069382.1 MGP_LPJ_G0029085.1 mouse_genomes_project 4 156458722 156526386 - Kcnab2 protein_coding retained_intron MGP_LPJ_T0069383.1 MGP_LPJ_G0029085.1 mouse_genomes_project 4 156458876 156472725 - Kcnab2 protein_coding processed_transcript MGP_LPJ_T0069384.1 MGP_LPJ_G0029085.1 mouse_genomes_project 4 156459706 156465287 - Kcnab2 protein_coding processed_transcript MGP_LPJ_T0069385.1 MGP_LPJ_G0029085.1 mouse_genomes_project 4 156473294 156497700 - Kcnab2 protein_coding processed_transcript MGP_LPJ_T0069386.1 MGP_LPJ_G0029085.1 mouse_genomes_project 4 156481666 156526337 - MGP_LPJ_P0069386 Kcnab2 protein_coding protein_coding MGP_LPJ_T0065385.1 MGP_LPJ_G0028158.1 mouse_genomes_project 4 43620489 43660705 + MGP_LPJ_P0065385 Dcaf10 protein_coding protein_coding MGP_LPJ_T0065386.1 MGP_LPJ_G0028158.1 mouse_genomes_project 4 43620508 43650378 + Dcaf10 protein_coding processed_transcript MGP_LPJ_T0065387.1 MGP_LPJ_G0028158.1 mouse_genomes_project 4 43620570 43655902 + Dcaf10 protein_coding processed_transcript MGP_LPJ_T0065388.1 MGP_LPJ_G0028158.1 mouse_genomes_project 4 43650244 43656613 + MGP_LPJ_P0065388 Dcaf10 protein_coding protein_coding MGP_LPJ_T0014356.1 MGP_LPJ_G0012447.1 mouse_genomes_project 4 5046947 5047279 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100732.1 MGP_LPJ_G0038995.1 mouse_genomes_project 4 1277661 1277793 + Gm26436 snoRNA snoRNA MGP_LPJ_T0014666.1 MGP_LPJ_G0012757.1 mouse_genomes_project 4 112408068 112409067 + processed_pseudogene processed_pseudogene MGP_LPJ_T0068534.1 MGP_LPJ_G0028880.1 mouse_genomes_project 4 139271458 139274332 + MGP_LPJ_P0068534 4930549C01Rik protein_coding protein_coding MGP_LPJ_T0099467.1 MGP_LPJ_G0037730.1 mouse_genomes_project 4 23065696 23065799 - Gm24042 snRNA snRNA MGP_LPJ_T0069415.1 MGP_LPJ_G0029092.1 mouse_genomes_project 4 158170396 158175543 - MGP_LPJ_P0069415 Smim1 protein_coding protein_coding MGP_LPJ_T0069416.1 MGP_LPJ_G0029092.1 mouse_genomes_project 4 158170514 158175839 - MGP_LPJ_P0069416 Smim1 protein_coding protein_coding MGP_LPJ_T0069417.1 MGP_LPJ_G0029092.1 mouse_genomes_project 4 158170514 158175893 - MGP_LPJ_P0069417 Smim1 protein_coding protein_coding MGP_LPJ_T0069418.1 MGP_LPJ_G0029092.1 mouse_genomes_project 4 158171382 158176157 - MGP_LPJ_P0069418 Smim1 protein_coding protein_coding MGP_LPJ_T0069419.1 MGP_LPJ_G0029092.1 mouse_genomes_project 4 158171387 158176079 - MGP_LPJ_P0069419 Smim1 protein_coding protein_coding MGP_LPJ_T0069420.1 MGP_LPJ_G0029092.1 mouse_genomes_project 4 158173236 158175863 - MGP_LPJ_P0069420 Smim1 protein_coding protein_coding MGP_LPJ_T0069421.1 MGP_LPJ_G0029092.1 mouse_genomes_project 4 158173236 158175794 - MGP_LPJ_P0069421 Smim1 protein_coding protein_coding MGP_LPJ_T0069422.1 MGP_LPJ_G0029092.1 mouse_genomes_project 4 158173236 158175543 - MGP_LPJ_P0069422 Smim1 protein_coding protein_coding MGP_LPJ_T0069423.1 MGP_LPJ_G0029092.1 mouse_genomes_project 4 158173237 158174282 - MGP_LPJ_P0069423 Smim1 protein_coding protein_coding MGP_LPJ_T0069424.1 MGP_LPJ_G0029092.1 mouse_genomes_project 4 158173237 158176077 - MGP_LPJ_P0069424 Smim1 protein_coding protein_coding MGP_LPJ_T0069425.1 MGP_LPJ_G0029092.1 mouse_genomes_project 4 158173507 158175964 - MGP_LPJ_P0069425 Smim1 protein_coding protein_coding MGP_LPJ_T0069426.1 MGP_LPJ_G0029092.1 mouse_genomes_project 4 158173625 158175590 - MGP_LPJ_P0069426 Smim1 protein_coding protein_coding MGP_LPJ_T0069427.1 MGP_LPJ_G0029092.1 mouse_genomes_project 4 158173650 158174250 - MGP_LPJ_P0069427 Smim1 protein_coding protein_coding MGP_LPJ_T0069428.1 MGP_LPJ_G0029092.1 mouse_genomes_project 4 158175232 158175839 - Smim1 protein_coding processed_transcript MGP_LPJ_T0069196.1 MGP_LPJ_G0029053.1 mouse_genomes_project 4 153976073 154005811 + MGP_LPJ_P0069196 Slc2a5 protein_coding protein_coding MGP_LPJ_T0069197.1 MGP_LPJ_G0029053.1 mouse_genomes_project 4 153987918 154001676 + Slc2a5 protein_coding processed_transcript MGP_LPJ_T0069198.1 MGP_LPJ_G0029053.1 mouse_genomes_project 4 154000988 154003888 + Slc2a5 protein_coding retained_intron MGP_LPJ_T0069199.1 MGP_LPJ_G0029053.1 mouse_genomes_project 4 154001189 154004473 + Slc2a5 protein_coding processed_transcript MGP_LPJ_T0067845.1 MGP_LPJ_G0028741.1 mouse_genomes_project 4 131790357 131791000 - Fam167b protein_coding processed_transcript MGP_LPJ_T0067846.1 MGP_LPJ_G0028741.1 mouse_genomes_project 4 131790357 131792092 - MGP_LPJ_P0067846 Fam167b protein_coding protein_coding MGP_LPJ_T0004447.1 MGP_LPJ_G0003877.1 mouse_genomes_project 4 8815771 8829376 + Gm11842 antisense antisense MGP_LPJ_T0014473.1 MGP_LPJ_G0012564.1 mouse_genomes_project 4 38622105 38622552 + processed_pseudogene processed_pseudogene MGP_LPJ_T0064657.1 MGP_LPJ_G0028009.1 mouse_genomes_project 4 16937451 16983376 - MGP_LPJ_P0064657 Atp6v0d2 protein_coding protein_coding MGP_LPJ_T0064658.1 MGP_LPJ_G0028009.1 mouse_genomes_project 4 16951491 16977714 - MGP_LPJ_P0064658 Atp6v0d2 protein_coding protein_coding MGP_LPJ_T0007883.1 MGP_LPJ_G0006445.1 mouse_genomes_project 4 63403973 63413390 + Gm11216 lincRNA lincRNA MGP_LPJ_T0100774.1 MGP_LPJ_G0039037.1 mouse_genomes_project 4 74301402 74301534 + Gm26379 snoRNA snoRNA MGP_LPJ_T0014578.1 MGP_LPJ_G0012669.1 mouse_genomes_project 4 79863416 79864559 + processed_pseudogene processed_pseudogene MGP_LPJ_T0067801.1 MGP_LPJ_G0028730.1 mouse_genomes_project 4 131479275 131502588 + MGP_LPJ_P0067801 Sync protein_coding protein_coding MGP_LPJ_T0067802.1 MGP_LPJ_G0028730.1 mouse_genomes_project 4 131479289 131501391 + Sync protein_coding retained_intron MGP_LPJ_T0098254.1 MGP_LPJ_G0036535.1 mouse_genomes_project 4 39307858 39307973 + n-R5s183 rRNA rRNA MGP_LPJ_T0007925.1 MGP_LPJ_G0006480.1 mouse_genomes_project 4 103911495 103913384 + Gm44037 lincRNA lincRNA MGP_LPJ_T0102169.1 MGP_LPJ_G0040206.1 mouse_genomes_project 4 147755496 147755958 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0099546.1 MGP_LPJ_G0037809.1 mouse_genomes_project 4 154924817 154924977 + Gm23405 snRNA snRNA MGP_LPJ_T0007844.1 MGP_LPJ_G0006413.1 mouse_genomes_project 4 38419025 38479741 - lincRNA lincRNA MGP_LPJ_T0014437.1 MGP_LPJ_G0012528.1 mouse_genomes_project 4 26956194 26956702 + processed_pseudogene processed_pseudogene MGP_LPJ_T0069239.1 MGP_LPJ_G0029061.1 mouse_genomes_project 4 154869357 154890077 + MGP_LPJ_P0069239 Tnfrsf9 protein_coding protein_coding MGP_LPJ_T0069241.1 MGP_LPJ_G0029061.1 mouse_genomes_project 4 154875888 154904276 + MGP_LPJ_P0069241 Tnfrsf9 protein_coding protein_coding MGP_LPJ_T0069242.1 MGP_LPJ_G0029061.1 mouse_genomes_project 4 154875923 154904276 + MGP_LPJ_P0069242 Tnfrsf9 protein_coding protein_coding MGP_LPJ_T0069243.1 MGP_LPJ_G0029061.1 mouse_genomes_project 4 154880994 154903405 + MGP_LPJ_P0069243 Tnfrsf9 protein_coding protein_coding MGP_LPJ_T0069244.1 MGP_LPJ_G0029061.1 mouse_genomes_project 4 154883593 154890068 + MGP_LPJ_P0069244 Tnfrsf9 protein_coding protein_coding MGP_LPJ_T0069245.1 MGP_LPJ_G0029061.1 mouse_genomes_project 4 154883674 154885623 + Tnfrsf9 protein_coding processed_transcript MGP_LPJ_T0069246.1 MGP_LPJ_G0029061.1 mouse_genomes_project 4 154883674 154904276 + MGP_LPJ_P0069246 Tnfrsf9 protein_coding protein_coding MGP_LPJ_T0069247.1 MGP_LPJ_G0029061.1 mouse_genomes_project 4 154885350 154903240 + MGP_LPJ_P0069247 Tnfrsf9 protein_coding protein_coding MGP_LPJ_T0069248.1 MGP_LPJ_G0029061.1 mouse_genomes_project 4 154885471 154891222 + MGP_LPJ_P0069248 Tnfrsf9 protein_coding protein_coding MGP_LPJ_T0065210.1 MGP_LPJ_G0028124.1 mouse_genomes_project 4 41704859 41740936 - MGP_LPJ_P0065210 Tln1 protein_coding protein_coding MGP_LPJ_T0065211.1 MGP_LPJ_G0028124.1 mouse_genomes_project 4 41722250 41724488 - MGP_LPJ_P0065211 Tln1 protein_coding protein_coding MGP_LPJ_T0065212.1 MGP_LPJ_G0028124.1 mouse_genomes_project 4 41723662 41728112 - MGP_LPJ_P0065212 Tln1 protein_coding protein_coding MGP_LPJ_T0065213.1 MGP_LPJ_G0028124.1 mouse_genomes_project 4 41730291 41731292 - Tln1 protein_coding processed_transcript MGP_LPJ_T0065214.1 MGP_LPJ_G0028124.1 mouse_genomes_project 4 41731354 41740671 - Tln1 protein_coding processed_transcript MGP_LPJ_T0065215.1 MGP_LPJ_G0028124.1 mouse_genomes_project 4 41731946 41735301 - MGP_LPJ_P0065215 Tln1 protein_coding protein_coding MGP_LPJ_T0065216.1 MGP_LPJ_G0028124.1 mouse_genomes_project 4 41732404 41732787 - Tln1 protein_coding processed_transcript MGP_LPJ_T0065217.1 MGP_LPJ_G0028124.1 mouse_genomes_project 4 41736183 41741205 - Tln1 protein_coding processed_transcript MGP_LPJ_T0065051.1 MGP_LPJ_G0028102.1 mouse_genomes_project 4 40720836 40721591 + MGP_LPJ_P0065051 Ccl27b protein_coding protein_coding MGP_LPJ_T0007871.1 MGP_LPJ_G0006435.1 mouse_genomes_project 4 55056142 55060713 - 2310081O03Rik lincRNA lincRNA MGP_LPJ_T0067337.1 MGP_LPJ_G0028613.1 mouse_genomes_project 4 120855697 120864693 - MGP_LPJ_P0067337 AA415398 protein_coding protein_coding MGP_LPJ_T0067338.1 MGP_LPJ_G0028613.1 mouse_genomes_project 4 120856826 120861165 - AA415398 protein_coding processed_transcript MGP_LPJ_T0067339.1 MGP_LPJ_G0028613.1 mouse_genomes_project 4 120857053 120865054 - AA415398 protein_coding processed_transcript MGP_LPJ_T0067340.1 MGP_LPJ_G0028613.1 mouse_genomes_project 4 120859462 120865453 - AA415398 protein_coding processed_transcript MGP_LPJ_T0004451.1 MGP_LPJ_G0003879.1 mouse_genomes_project 4 11956091 11970793 + antisense antisense MGP_LPJ_T0069255.1 MGP_LPJ_G0029065.1 mouse_genomes_project 4 155009307 155020796 - MGP_LPJ_P0069255 Vamp3 protein_coding protein_coding MGP_LPJ_T0069256.1 MGP_LPJ_G0029065.1 mouse_genomes_project 4 155012401 155020789 - Vamp3 protein_coding retained_intron MGP_LPJ_T0069257.1 MGP_LPJ_G0029065.1 mouse_genomes_project 4 155018477 155020806 - Vamp3 protein_coding retained_intron MGP_LPJ_T0068921.1 MGP_LPJ_G0028976.1 mouse_genomes_project 4 146326615 146441504 - MGP_LPJ_P0068921 Prdm2 protein_coding protein_coding MGP_LPJ_T0068922.1 MGP_LPJ_G0028976.1 mouse_genomes_project 4 146381168 146416848 - MGP_LPJ_P0068922 Prdm2 protein_coding protein_coding MGP_LPJ_T0068923.1 MGP_LPJ_G0028976.1 mouse_genomes_project 4 146381192 146441508 - MGP_LPJ_P0068923 Prdm2 protein_coding protein_coding MGP_LPJ_T0068924.1 MGP_LPJ_G0028976.1 mouse_genomes_project 4 146398554 146441788 - Prdm2 protein_coding processed_transcript MGP_LPJ_T0069745.1 MGP_LPJ_G0029155.1 mouse_genomes_project 4 160556818 160565324 - MGP_LPJ_P0069745 Klhl17 protein_coding protein_coding MGP_LPJ_T0067458.1 MGP_LPJ_G0028648.1 mouse_genomes_project 4 124886656 124898113 + MGP_LPJ_P0067458 Hpcal4 protein_coding protein_coding MGP_LPJ_T0067459.1 MGP_LPJ_G0028648.1 mouse_genomes_project 4 124886668 124894925 + MGP_LPJ_P0067459 Hpcal4 protein_coding protein_coding MGP_LPJ_T0067460.1 MGP_LPJ_G0028648.1 mouse_genomes_project 4 124886928 124892210 + MGP_LPJ_P0067460 Hpcal4 protein_coding protein_coding MGP_LPJ_T0067461.1 MGP_LPJ_G0028648.1 mouse_genomes_project 4 124886945 124887581 + Hpcal4 protein_coding processed_transcript MGP_LPJ_T0067462.1 MGP_LPJ_G0028648.1 mouse_genomes_project 4 124887158 124894156 + MGP_LPJ_P0067462 Hpcal4 protein_coding protein_coding MGP_LPJ_T0067129.1 MGP_LPJ_G0028564.1 mouse_genomes_project 4 118715310 118843973 + MGP_LPJ_P0067129 Eri3 protein_coding protein_coding MGP_LPJ_T0067130.1 MGP_LPJ_G0028564.1 mouse_genomes_project 4 118717555 118749236 + MGP_LPJ_P0067130 Eri3 protein_coding protein_coding MGP_LPJ_T0067131.1 MGP_LPJ_G0028564.1 mouse_genomes_project 4 118729578 118843973 + Eri3 protein_coding processed_transcript MGP_LPJ_T0067132.1 MGP_LPJ_G0028564.1 mouse_genomes_project 4 118749205 118782111 + MGP_LPJ_P0067132 Eri3 protein_coding protein_coding MGP_LPJ_T0067133.1 MGP_LPJ_G0028564.1 mouse_genomes_project 4 118755596 118781770 + Eri3 protein_coding processed_transcript MGP_LPJ_T0067134.1 MGP_LPJ_G0028564.1 mouse_genomes_project 4 118805966 118843957 + Eri3 protein_coding processed_transcript MGP_LPJ_T0065469.1 MGP_LPJ_G0028179.1 mouse_genomes_project 4 45424323 45468568 - MGP_LPJ_P0065469 Anks6 protein_coding protein_coding MGP_LPJ_T0065470.1 MGP_LPJ_G0028179.1 mouse_genomes_project 4 45424343 45468568 - MGP_LPJ_P0065470 Anks6 protein_coding protein_coding MGP_LPJ_T0065471.1 MGP_LPJ_G0028179.1 mouse_genomes_project 4 45425654 45434416 - Anks6 protein_coding processed_transcript MGP_LPJ_T0065472.1 MGP_LPJ_G0028179.1 mouse_genomes_project 4 45447129 45448848 - Anks6 protein_coding processed_transcript MGP_LPJ_T0099480.1 MGP_LPJ_G0037743.1 mouse_genomes_project 4 41351866 41351931 - Gm25010 snRNA snRNA MGP_LPJ_T0100773.1 MGP_LPJ_G0039036.1 mouse_genomes_project 4 74301397 74301535 + Gm26379 snoRNA snoRNA MGP_LPJ_T0102151.1 MGP_LPJ_G0040188.1 mouse_genomes_project 4 115017957 115018967 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0067752.1 MGP_LPJ_G0028722.1 mouse_genomes_project 4 131154131 131164553 + Ak2 protein_coding processed_transcript MGP_LPJ_T0067753.1 MGP_LPJ_G0028722.1 mouse_genomes_project 4 131155392 131173807 + MGP_LPJ_P0067753 Ak2 protein_coding protein_coding MGP_LPJ_T0067754.1 MGP_LPJ_G0028722.1 mouse_genomes_project 4 131155392 131170693 + MGP_LPJ_P0067754 Ak2 protein_coding protein_coding MGP_LPJ_T0067755.1 MGP_LPJ_G0028722.1 mouse_genomes_project 4 131155521 131170521 + MGP_LPJ_P0067755 Ak2 protein_coding nonsense_mediated_decay MGP_LPJ_T0014773.1 MGP_LPJ_G0012864.1 mouse_genomes_project 4 151446041 151446467 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004485.1 MGP_LPJ_G0003908.1 mouse_genomes_project 4 61372509 61383092 + Gm12910 antisense antisense MGP_LPJ_T0014642.1 MGP_LPJ_G0012733.1 mouse_genomes_project 4 104619906 104620147 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010644.1 MGP_LPJ_G0008762.1 mouse_genomes_project 4 131470429 131470511 - Gm22994 miRNA miRNA MGP_LPJ_T0068122.1 MGP_LPJ_G0028789.1 mouse_genomes_project 4 135056913 135065168 - MGP_LPJ_P0068122 Xkr8 protein_coding protein_coding MGP_LPJ_T0068123.1 MGP_LPJ_G0028789.1 mouse_genomes_project 4 135061123 135065150 - Xkr8 protein_coding processed_transcript MGP_LPJ_T0068124.1 MGP_LPJ_G0028789.1 mouse_genomes_project 4 135063525 135065105 - Xkr8 protein_coding processed_transcript MGP_LPJ_T0100799.1 MGP_LPJ_G0039062.1 mouse_genomes_project 4 128810376 128810506 - Gm24161 snoRNA snoRNA MGP_LPJ_T0065694.1 MGP_LPJ_G0028242.1 mouse_genomes_project 4 57752742 57874951 - MGP_LPJ_P0065694 AI314180 protein_coding protein_coding MGP_LPJ_T0065695.1 MGP_LPJ_G0028242.1 mouse_genomes_project 4 57764440 57765658 - AI314180 protein_coding processed_transcript MGP_LPJ_T0065696.1 MGP_LPJ_G0028242.1 mouse_genomes_project 4 57765246 57874132 - MGP_LPJ_P0065696 AI314180 protein_coding protein_coding MGP_LPJ_T0065697.1 MGP_LPJ_G0028242.1 mouse_genomes_project 4 57769111 57773401 - AI314180 protein_coding processed_transcript MGP_LPJ_T0065698.1 MGP_LPJ_G0028242.1 mouse_genomes_project 4 57773151 57788952 - AI314180 protein_coding processed_transcript MGP_LPJ_T0065699.1 MGP_LPJ_G0028242.1 mouse_genomes_project 4 57785441 57874129 - MGP_LPJ_P0065699 AI314180 protein_coding protein_coding MGP_LPJ_T0065700.1 MGP_LPJ_G0028242.1 mouse_genomes_project 4 57787593 57789801 - AI314180 protein_coding processed_transcript MGP_LPJ_T0065701.1 MGP_LPJ_G0028242.1 mouse_genomes_project 4 57790959 57802193 - AI314180 protein_coding processed_transcript MGP_LPJ_T0065702.1 MGP_LPJ_G0028242.1 mouse_genomes_project 4 57801462 57874906 - MGP_LPJ_P0065702 AI314180 protein_coding protein_coding MGP_LPJ_T0065703.1 MGP_LPJ_G0028242.1 mouse_genomes_project 4 57820926 57874951 - MGP_LPJ_P0065703 AI314180 protein_coding protein_coding MGP_LPJ_T0065704.1 MGP_LPJ_G0028242.1 mouse_genomes_project 4 57830774 57874104 - MGP_LPJ_P0065704 AI314180 protein_coding protein_coding MGP_LPJ_T0067837.1 MGP_LPJ_G0028740.1 mouse_genomes_project 4 131756786 131768170 - MGP_LPJ_P0067837 Lck protein_coding protein_coding MGP_LPJ_T0067838.1 MGP_LPJ_G0028740.1 mouse_genomes_project 4 131756791 131787457 - MGP_LPJ_P0067838 Lck protein_coding protein_coding MGP_LPJ_T0067839.1 MGP_LPJ_G0028740.1 mouse_genomes_project 4 131756791 131768189 - MGP_LPJ_P0067839 Lck protein_coding protein_coding MGP_LPJ_T0067840.1 MGP_LPJ_G0028740.1 mouse_genomes_project 4 131757337 131765654 - Lck protein_coding retained_intron MGP_LPJ_T0067841.1 MGP_LPJ_G0028740.1 mouse_genomes_project 4 131760443 131766037 - Lck protein_coding retained_intron MGP_LPJ_T0067842.1 MGP_LPJ_G0028740.1 mouse_genomes_project 4 131765281 131766267 - Lck protein_coding retained_intron MGP_LPJ_T0067843.1 MGP_LPJ_G0028740.1 mouse_genomes_project 4 131766660 131767885 - Lck protein_coding retained_intron MGP_LPJ_T0067844.1 MGP_LPJ_G0028740.1 mouse_genomes_project 4 131767162 131768170 - MGP_LPJ_P0067844 Lck protein_coding protein_coding MGP_LPJ_T0067797.1 MGP_LPJ_G0028729.1 mouse_genomes_project 4 131395355 131403689 - MGP_LPJ_P0067797 C77080 protein_coding protein_coding MGP_LPJ_T0067798.1 MGP_LPJ_G0028729.1 mouse_genomes_project 4 131395355 131414747 - MGP_LPJ_P0067798 C77080 protein_coding protein_coding MGP_LPJ_T0067799.1 MGP_LPJ_G0028729.1 mouse_genomes_project 4 131397232 131423971 - MGP_LPJ_P0067799 C77080 protein_coding protein_coding MGP_LPJ_T0067800.1 MGP_LPJ_G0028729.1 mouse_genomes_project 4 131401137 131440148 - MGP_LPJ_P0067800 C77080 protein_coding protein_coding MGP_LPJ_T0007961.1 MGP_LPJ_G0006506.1 mouse_genomes_project 4 126407140 126412543 + 4933407E24Rik lincRNA lincRNA MGP_LPJ_T0064632.1 MGP_LPJ_G0027998.1 mouse_genomes_project 4 12890223 12927202 + MGP_LPJ_P0064632 Nbn protein_coding protein_coding MGP_LPJ_T0064633.1 MGP_LPJ_G0027998.1 mouse_genomes_project 4 12890265 12916166 + MGP_LPJ_P0064633 Nbn protein_coding protein_coding MGP_LPJ_T0067269.1 MGP_LPJ_G0028600.1 mouse_genomes_project 4 120456284 120463033 - MGP_LPJ_P0067269 Zfp691 protein_coding protein_coding MGP_LPJ_T0067270.1 MGP_LPJ_G0028600.1 mouse_genomes_project 4 120456284 120463372 - MGP_LPJ_P0067270 Zfp691 protein_coding protein_coding MGP_LPJ_T0067271.1 MGP_LPJ_G0028600.1 mouse_genomes_project 4 120456287 120463033 - MGP_LPJ_P0067271 Zfp691 protein_coding protein_coding MGP_LPJ_T0067272.1 MGP_LPJ_G0028600.1 mouse_genomes_project 4 120458783 120463033 - MGP_LPJ_P0067272 Zfp691 protein_coding protein_coding MGP_LPJ_T0066237.1 MGP_LPJ_G0028383.1 mouse_genomes_project 4 98217684 98452599 + MGP_LPJ_P0066237 Nfia protein_coding protein_coding MGP_LPJ_T0066238.1 MGP_LPJ_G0028383.1 mouse_genomes_project 4 98223405 98578294 + MGP_LPJ_P0066238 Nfia protein_coding protein_coding MGP_LPJ_T0066239.1 MGP_LPJ_G0028383.1 mouse_genomes_project 4 98223423 98578297 + MGP_LPJ_P0066239 Nfia protein_coding protein_coding MGP_LPJ_T0066240.1 MGP_LPJ_G0028383.1 mouse_genomes_project 4 98223600 98578294 + MGP_LPJ_P0066240 Nfia protein_coding protein_coding MGP_LPJ_T0066241.1 MGP_LPJ_G0028383.1 mouse_genomes_project 4 98223616 98578294 + MGP_LPJ_P0066241 Nfia protein_coding protein_coding MGP_LPJ_T0066242.1 MGP_LPJ_G0028383.1 mouse_genomes_project 4 98223631 98578294 + MGP_LPJ_P0066242 Nfia protein_coding protein_coding MGP_LPJ_T0066243.1 MGP_LPJ_G0028383.1 mouse_genomes_project 4 98330031 98518517 + MGP_LPJ_P0066243 Nfia protein_coding protein_coding MGP_LPJ_T0066244.1 MGP_LPJ_G0028383.1 mouse_genomes_project 4 98361564 98494821 + Nfia protein_coding processed_transcript MGP_LPJ_T0067511.1 MGP_LPJ_G0028663.1 mouse_genomes_project 4 126520103 126536112 - MGP_LPJ_P0067511 Utp11l protein_coding protein_coding MGP_LPJ_T0067512.1 MGP_LPJ_G0028663.1 mouse_genomes_project 4 126520748 126536046 - Utp11l protein_coding processed_transcript MGP_LPJ_T0004459.1 MGP_LPJ_G0003885.1 mouse_genomes_project 4 32687286 32692032 + Gm12364 antisense antisense MGP_LPJ_T0007948.1 MGP_LPJ_G0006497.1 mouse_genomes_project 4 120253751 120266937 - Gm12865 lincRNA lincRNA MGP_LPJ_T0064901.1 MGP_LPJ_G0028065.1 mouse_genomes_project 4 38193208 38202007 - MGP_LPJ_P0064901 Ndufb6 protein_coding protein_coding MGP_LPJ_T0064902.1 MGP_LPJ_G0028065.1 mouse_genomes_project 4 38193282 38201995 - MGP_LPJ_P0064902 Ndufb6 protein_coding protein_coding MGP_LPJ_T0065271.1 MGP_LPJ_G0028137.1 mouse_genomes_project 4 41965746 41968568 - MGP_LPJ_P0065271 Olfr159 protein_coding protein_coding MGP_LPJ_T0014402.1 MGP_LPJ_G0012493.1 mouse_genomes_project 4 18119730 18120791 - processed_pseudogene processed_pseudogene MGP_LPJ_T0066868.1 MGP_LPJ_G0028509.1 mouse_genomes_project 4 116066111 116071296 + MGP_LPJ_P0066868 Pdzk1ip1 protein_coding protein_coding MGP_LPJ_T0066869.1 MGP_LPJ_G0028509.1 mouse_genomes_project 4 116066111 116071296 + MGP_LPJ_P0066869 Pdzk1ip1 protein_coding protein_coding MGP_LPJ_T0066870.1 MGP_LPJ_G0028509.1 mouse_genomes_project 4 116066126 116071301 + MGP_LPJ_P0066870 Pdzk1ip1 protein_coding protein_coding MGP_LPJ_T0066871.1 MGP_LPJ_G0028509.1 mouse_genomes_project 4 116066126 116071301 + MGP_LPJ_P0066871 Pdzk1ip1 protein_coding protein_coding MGP_LPJ_T0066872.1 MGP_LPJ_G0028509.1 mouse_genomes_project 4 116066446 116068750 + Pdzk1ip1 protein_coding processed_transcript MGP_LPJ_T0066873.1 MGP_LPJ_G0028509.1 mouse_genomes_project 4 116067590 116071266 + Pdzk1ip1 protein_coding processed_transcript MGP_LPJ_T0066874.1 MGP_LPJ_G0028509.1 mouse_genomes_project 4 116067657 116068635 + Pdzk1ip1 protein_coding processed_transcript MGP_LPJ_T0066875.1 MGP_LPJ_G0028509.1 mouse_genomes_project 4 116068335 116071266 + Pdzk1ip1 protein_coding processed_transcript MGP_LPJ_T0065900.1 MGP_LPJ_G0028301.1 mouse_genomes_project 4 73566757 73569173 - 2310002L09Rik protein_coding processed_transcript MGP_LPJ_T0065901.1 MGP_LPJ_G0028301.1 mouse_genomes_project 4 73566757 73578231 - MGP_LPJ_P0065901 2310002L09Rik protein_coding protein_coding MGP_LPJ_T0065902.1 MGP_LPJ_G0028301.1 mouse_genomes_project 4 73568950 73578230 - MGP_LPJ_P0065902 2310002L09Rik protein_coding protein_coding MGP_LPJ_T0014759.1 MGP_LPJ_G0012850.1 mouse_genomes_project 4 144115953 144116768 + processed_pseudogene processed_pseudogene MGP_LPJ_T0064535.1 MGP_LPJ_G0027973.1 mouse_genomes_project 4 7883217 7903426 + MGP_LPJ_P0064535 Trp53inp1 protein_coding protein_coding MGP_LPJ_T0064536.1 MGP_LPJ_G0027973.1 mouse_genomes_project 4 7883227 7903426 + Trp53inp1 protein_coding processed_transcript MGP_LPJ_T0064537.1 MGP_LPJ_G0027973.1 mouse_genomes_project 4 7883230 7895447 + Trp53inp1 protein_coding processed_transcript MGP_LPJ_T0064538.1 MGP_LPJ_G0027973.1 mouse_genomes_project 4 7893505 7897061 + Trp53inp1 protein_coding processed_transcript MGP_LPJ_T0014540.1 MGP_LPJ_G0012631.1 mouse_genomes_project 4 66095233 66095708 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100729.1 MGP_LPJ_G0038992.1 mouse_genomes_project 4 322318 322455 - Gm22781 snoRNA snoRNA MGP_LPJ_T0011578.1 MGP_LPJ_G0009696.1 mouse_genomes_project 4 46035122 46035249 + Gm27601 misc_RNA misc_RNA MGP_LPJ_T0100768.1 MGP_LPJ_G0039031.1 mouse_genomes_project 4 63767769 63767898 + Gm23950 snoRNA snoRNA MGP_LPJ_T0069615.1 MGP_LPJ_G0029126.1 mouse_genomes_project 4 159969475 160001920 + MGP_LPJ_P0069615 Ssu72 protein_coding protein_coding MGP_LPJ_T0069616.1 MGP_LPJ_G0029126.1 mouse_genomes_project 4 159969799 159981146 + Ssu72 protein_coding retained_intron MGP_LPJ_T0069617.1 MGP_LPJ_G0029126.1 mouse_genomes_project 4 159969810 160000230 + MGP_LPJ_P0069617 Ssu72 protein_coding protein_coding MGP_LPJ_T0014588.1 MGP_LPJ_G0012679.1 mouse_genomes_project 4 84919288 84921379 + processed_pseudogene processed_pseudogene MGP_LPJ_T0069297.1 MGP_LPJ_G0029073.1 mouse_genomes_project 4 156052084 156064993 + Nol9 protein_coding retained_intron MGP_LPJ_T0069298.1 MGP_LPJ_G0029073.1 mouse_genomes_project 4 156052090 156075981 + MGP_LPJ_P0069298 Nol9 protein_coding protein_coding MGP_LPJ_T0069299.1 MGP_LPJ_G0029073.1 mouse_genomes_project 4 156052099 156071186 + Nol9 protein_coding retained_intron MGP_LPJ_T0069300.1 MGP_LPJ_G0029073.1 mouse_genomes_project 4 156052099 156077451 + MGP_LPJ_P0069300 Nol9 protein_coding protein_coding MGP_LPJ_T0069301.1 MGP_LPJ_G0029073.1 mouse_genomes_project 4 156052126 156075999 + MGP_LPJ_P0069301 Nol9 protein_coding nonsense_mediated_decay MGP_LPJ_T0014346.1 MGP_LPJ_G0012437.1 mouse_genomes_project 4 1069654 1070170 - processed_pseudogene processed_pseudogene MGP_LPJ_T0067710.1 MGP_LPJ_G0028713.1 mouse_genomes_project 4 130069989 130449758 + Csmd2 protein_coding processed_transcript MGP_LPJ_T0067711.1 MGP_LPJ_G0028713.1 mouse_genomes_project 4 130070048 130532194 + Csmd2 protein_coding retained_intron MGP_LPJ_T0067712.1 MGP_LPJ_G0028713.1 mouse_genomes_project 4 130070074 130678029 + MGP_LPJ_P0067712 Csmd2 protein_coding protein_coding MGP_LPJ_T0067714.1 MGP_LPJ_G0028713.1 mouse_genomes_project 4 130582633 130608846 + Csmd2 protein_coding processed_transcript MGP_LPJ_T0067715.1 MGP_LPJ_G0028713.1 mouse_genomes_project 4 130628346 130638865 + Csmd2 protein_coding processed_transcript MGP_LPJ_T0067716.1 MGP_LPJ_G0028713.1 mouse_genomes_project 4 130658353 130663152 + Csmd2 protein_coding processed_transcript MGP_LPJ_T0067498.1 MGP_LPJ_G0028657.1 mouse_genomes_project 4 125648105 125652700 + MGP_LPJ_P0067498 4933427I04Rik protein_coding protein_coding MGP_LPJ_T0067807.1 MGP_LPJ_G0028732.1 mouse_genomes_project 4 131528746 131548046 + MGP_LPJ_P0067807 Zbtb8os protein_coding nonsense_mediated_decay MGP_LPJ_T0067808.1 MGP_LPJ_G0028732.1 mouse_genomes_project 4 131528746 131543400 + MGP_LPJ_P0067808 Zbtb8os protein_coding protein_coding MGP_LPJ_T0067809.1 MGP_LPJ_G0028732.1 mouse_genomes_project 4 131529055 131539854 + MGP_LPJ_P0067809 Zbtb8os protein_coding protein_coding MGP_LPJ_T0067810.1 MGP_LPJ_G0028732.1 mouse_genomes_project 4 131529090 131539952 + MGP_LPJ_P0067810 Zbtb8os protein_coding nonsense_mediated_decay MGP_LPJ_T0067811.1 MGP_LPJ_G0028732.1 mouse_genomes_project 4 131536989 131539849 + Zbtb8os protein_coding retained_intron MGP_LPJ_T0014706.1 MGP_LPJ_G0012797.1 mouse_genomes_project 4 122806015 122806343 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014768.1 MGP_LPJ_G0012859.1 mouse_genomes_project 4 147704905 147708946 + processed_pseudogene processed_pseudogene MGP_LPJ_T0018033.1 MGP_LPJ_G0015488.1 mouse_genomes_project 4 120524884 120526525 + Gm12898 processed_transcript processed_transcript MGP_LPJ_T0064641.1 MGP_LPJ_G0028001.1 mouse_genomes_project 4 14850272 15126922 + MGP_LPJ_P0064641 Mmp16 protein_coding nonsense_mediated_decay MGP_LPJ_T0064642.1 MGP_LPJ_G0028001.1 mouse_genomes_project 4 14850470 15003992 + MGP_LPJ_P0064642 Mmp16 protein_coding protein_coding MGP_LPJ_T0064643.1 MGP_LPJ_G0028001.1 mouse_genomes_project 4 14850837 15128608 + MGP_LPJ_P0064643 Mmp16 protein_coding protein_coding MGP_LPJ_T0064644.1 MGP_LPJ_G0028001.1 mouse_genomes_project 4 14850972 15056957 + Mmp16 protein_coding retained_intron MGP_LPJ_T0064645.1 MGP_LPJ_G0028001.1 mouse_genomes_project 4 15054032 15103170 + Mmp16 protein_coding retained_intron MGP_LPJ_T0068091.1 MGP_LPJ_G0028783.1 mouse_genomes_project 4 134774486 134779677 - MGP_LPJ_P0068091 Med18 protein_coding protein_coding MGP_LPJ_T0068092.1 MGP_LPJ_G0028783.1 mouse_genomes_project 4 134775711 134779087 - MGP_LPJ_P0068092 Med18 protein_coding protein_coding MGP_LPJ_T0007846.1 MGP_LPJ_G0006415.1 mouse_genomes_project 4 41180512 41181996 + Gm26643 lincRNA lincRNA MGP_LPJ_T0069287.1 MGP_LPJ_G0029071.1 mouse_genomes_project 4 156031223 156039111 - MGP_LPJ_P0069287 Zbtb48 protein_coding nonsense_mediated_decay MGP_LPJ_T0069288.1 MGP_LPJ_G0029071.1 mouse_genomes_project 4 156031223 156039111 - MGP_LPJ_P0069288 Zbtb48 protein_coding protein_coding MGP_LPJ_T0069289.1 MGP_LPJ_G0029071.1 mouse_genomes_project 4 156031225 156039121 - Zbtb48 protein_coding retained_intron MGP_LPJ_T0069290.1 MGP_LPJ_G0029071.1 mouse_genomes_project 4 156031249 156032066 - Zbtb48 protein_coding processed_transcript MGP_LPJ_T0069291.1 MGP_LPJ_G0029071.1 mouse_genomes_project 4 156032558 156033556 - Zbtb48 protein_coding processed_transcript MGP_LPJ_T0069292.1 MGP_LPJ_G0029071.1 mouse_genomes_project 4 156033041 156037894 - MGP_LPJ_P0069292 Zbtb48 protein_coding nonsense_mediated_decay MGP_LPJ_T0069293.1 MGP_LPJ_G0029071.1 mouse_genomes_project 4 156033935 156037497 - Zbtb48 protein_coding retained_intron MGP_LPJ_T0069294.1 MGP_LPJ_G0029071.1 mouse_genomes_project 4 156037927 156039087 - MGP_LPJ_P0069294 Zbtb48 protein_coding protein_coding MGP_LPJ_T0064905.1 MGP_LPJ_G0028067.1 mouse_genomes_project 4 38626158 38654692 - MGP_LPJ_P0064905 Aptx protein_coding protein_coding MGP_LPJ_T0064906.1 MGP_LPJ_G0028067.1 mouse_genomes_project 4 38626158 38654972 - MGP_LPJ_P0064906 Aptx protein_coding protein_coding MGP_LPJ_T0064907.1 MGP_LPJ_G0028067.1 mouse_genomes_project 4 38628700 38654940 - MGP_LPJ_P0064907 Aptx protein_coding protein_coding MGP_LPJ_T0064908.1 MGP_LPJ_G0028067.1 mouse_genomes_project 4 38630018 38654965 - MGP_LPJ_P0064908 Aptx protein_coding nonsense_mediated_decay MGP_LPJ_T0064909.1 MGP_LPJ_G0028067.1 mouse_genomes_project 4 38637356 38641222 - Aptx protein_coding processed_transcript MGP_LPJ_T0064910.1 MGP_LPJ_G0028067.1 mouse_genomes_project 4 38641734 38654494 - MGP_LPJ_P0064910 Aptx protein_coding nonsense_mediated_decay MGP_LPJ_T0014661.1 MGP_LPJ_G0012752.1 mouse_genomes_project 4 109934903 109935139 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014362.1 MGP_LPJ_G0012453.1 mouse_genomes_project 4 7251550 7251841 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007863.1 MGP_LPJ_G0006428.1 mouse_genomes_project 4 53415024 53415499 - Gm29067 lincRNA lincRNA MGP_LPJ_T0007988.1 MGP_LPJ_G0006523.1 mouse_genomes_project 4 133185902 133216496 + Gm12973 lincRNA lincRNA MGP_LPJ_T0098261.1 MGP_LPJ_G0036542.1 mouse_genomes_project 4 95440096 95440210 + n-R5s189 rRNA rRNA MGP_LPJ_T0065848.1 MGP_LPJ_G0028282.1 mouse_genomes_project 4 62849839 62863109 + MGP_LPJ_P0065848 Atp6v1g1 protein_coding protein_coding MGP_LPJ_T0014535.1 MGP_LPJ_G0012626.1 mouse_genomes_project 4 62205393 62206057 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014536.1 MGP_LPJ_G0012627.1 mouse_genomes_project 4 62879687 62879934 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004469.1 MGP_LPJ_G0003894.1 mouse_genomes_project 4 41950409 41954802 + antisense antisense MGP_LPJ_T0064900.1 MGP_LPJ_G0028064.1 mouse_genomes_project 4 38182362 38192612 - MGP_LPJ_P0064900 Topors protein_coding protein_coding MGP_LPJ_T0066174.1 MGP_LPJ_G0028368.1 mouse_genomes_project 4 95305051 95345507 - MGP_LPJ_P0066174 Mysm1 protein_coding protein_coding MGP_LPJ_T0066175.1 MGP_LPJ_G0028368.1 mouse_genomes_project 4 95305074 95318101 - Mysm1 protein_coding processed_transcript MGP_LPJ_T0066176.1 MGP_LPJ_G0028368.1 mouse_genomes_project 4 95311332 95318232 - Mysm1 protein_coding processed_transcript MGP_LPJ_T0066177.1 MGP_LPJ_G0028368.1 mouse_genomes_project 4 95329081 95345482 - Mysm1 protein_coding processed_transcript MGP_LPJ_T0066178.1 MGP_LPJ_G0028368.1 mouse_genomes_project 4 95330308 95345449 - Mysm1 protein_coding processed_transcript MGP_LPJ_T0066179.1 MGP_LPJ_G0028368.1 mouse_genomes_project 4 95330348 95336482 - Mysm1 protein_coding processed_transcript MGP_LPJ_T0066180.1 MGP_LPJ_G0028368.1 mouse_genomes_project 4 95330440 95345485 - Mysm1 protein_coding processed_transcript MGP_LPJ_T0066181.1 MGP_LPJ_G0028368.1 mouse_genomes_project 4 95336108 95345460 - Mysm1 protein_coding processed_transcript MGP_LPJ_T0066182.1 MGP_LPJ_G0028368.1 mouse_genomes_project 4 95338269 95345482 - Mysm1 protein_coding processed_transcript MGP_LPJ_T0069618.1 MGP_LPJ_G0029127.1 mouse_genomes_project 4 160002840 160008183 + MGP_LPJ_P0069618 Tmem240 protein_coding protein_coding MGP_LPJ_T0069619.1 MGP_LPJ_G0029127.1 mouse_genomes_project 4 160002844 160008605 + Tmem240 protein_coding retained_intron MGP_LPJ_T0069620.1 MGP_LPJ_G0029127.1 mouse_genomes_project 4 160002914 160008605 + MGP_LPJ_P0069620 Tmem240 protein_coding protein_coding MGP_LPJ_T0066101.1 MGP_LPJ_G0028334.1 mouse_genomes_project 4 88614170 88671978 - MGP_LPJ_P0066101 Hacd4 protein_coding protein_coding MGP_LPJ_T0066104.1 MGP_LPJ_G0028334.1 mouse_genomes_project 4 88639560 88671991 - MGP_LPJ_P0066104 Hacd4 protein_coding protein_coding MGP_LPJ_T0066105.1 MGP_LPJ_G0028334.1 mouse_genomes_project 4 88642149 88671989 - MGP_LPJ_P0066105 Hacd4 protein_coding protein_coding MGP_LPJ_T0007939.1 MGP_LPJ_G0006489.1 mouse_genomes_project 4 108682772 108688974 + 4933424M12Rik lincRNA lincRNA MGP_LPJ_T0007940.1 MGP_LPJ_G0006489.1 mouse_genomes_project 4 108686901 108688974 + 4933424M12Rik lincRNA lincRNA MGP_LPJ_T0068005.1 MGP_LPJ_G0028768.1 mouse_genomes_project 4 133154219 133165803 + MGP_LPJ_P0068005 Matn1 protein_coding protein_coding MGP_LPJ_T0069039.1 MGP_LPJ_G0029023.1 mouse_genomes_project 4 151809416 151817421 - MGP_LPJ_P0069039 Fbxo44 protein_coding protein_coding MGP_LPJ_T0069040.1 MGP_LPJ_G0029023.1 mouse_genomes_project 4 151809419 151817909 - MGP_LPJ_P0069040 Fbxo44 protein_coding protein_coding MGP_LPJ_T0069041.1 MGP_LPJ_G0029023.1 mouse_genomes_project 4 151809419 151817920 - MGP_LPJ_P0069041 Fbxo44 protein_coding nonsense_mediated_decay MGP_LPJ_T0069042.1 MGP_LPJ_G0029023.1 mouse_genomes_project 4 151809883 151817702 - MGP_LPJ_P0069042 Fbxo44 protein_coding protein_coding MGP_LPJ_T0069043.1 MGP_LPJ_G0029023.1 mouse_genomes_project 4 151810153 151816512 - MGP_LPJ_P0069043 Fbxo44 protein_coding nonsense_mediated_decay MGP_LPJ_T0069044.1 MGP_LPJ_G0029023.1 mouse_genomes_project 4 151810188 151817475 - MGP_LPJ_P0069044 Fbxo44 protein_coding protein_coding MGP_LPJ_T0069045.1 MGP_LPJ_G0029023.1 mouse_genomes_project 4 151810188 151817700 - MGP_LPJ_P0069045 Fbxo44 protein_coding nonsense_mediated_decay MGP_LPJ_T0069046.1 MGP_LPJ_G0029023.1 mouse_genomes_project 4 151812114 151817676 - MGP_LPJ_P0069046 Fbxo44 protein_coding protein_coding MGP_LPJ_T0069047.1 MGP_LPJ_G0029023.1 mouse_genomes_project 4 151812764 151817674 - MGP_LPJ_P0069047 Fbxo44 protein_coding nonsense_mediated_decay MGP_LPJ_T0069048.1 MGP_LPJ_G0029023.1 mouse_genomes_project 4 151812784 151818308 - MGP_LPJ_P0069048 Fbxo44 protein_coding protein_coding MGP_LPJ_T0007891.1 MGP_LPJ_G0006453.1 mouse_genomes_project 4 81949952 81975863 - Gm11264 lincRNA lincRNA MGP_LPJ_T0014778.1 MGP_LPJ_G0012869.1 mouse_genomes_project 4 152898206 152899098 - processed_pseudogene processed_pseudogene MGP_LPJ_T0066137.1 MGP_LPJ_G0028358.1 mouse_genomes_project 4 91533826 91688033 - MGP_LPJ_P0066137 Elavl2 protein_coding protein_coding MGP_LPJ_T0066138.1 MGP_LPJ_G0028358.1 mouse_genomes_project 4 91533826 91658186 - MGP_LPJ_P0066138 Elavl2 protein_coding protein_coding MGP_LPJ_T0066139.1 MGP_LPJ_G0028358.1 mouse_genomes_project 4 91533826 91658151 - MGP_LPJ_P0066139 Elavl2 protein_coding protein_coding MGP_LPJ_T0066140.1 MGP_LPJ_G0028358.1 mouse_genomes_project 4 91533826 91658171 - MGP_LPJ_P0066140 Elavl2 protein_coding protein_coding MGP_LPJ_T0066141.1 MGP_LPJ_G0028358.1 mouse_genomes_project 4 91536143 91537652 - Elavl2 protein_coding retained_intron MGP_LPJ_T0066142.1 MGP_LPJ_G0028358.1 mouse_genomes_project 4 91536303 91595540 - MGP_LPJ_P0066142 Elavl2 protein_coding protein_coding MGP_LPJ_T0066143.1 MGP_LPJ_G0028358.1 mouse_genomes_project 4 91536303 91597307 - MGP_LPJ_P0066143 Elavl2 protein_coding protein_coding MGP_LPJ_T0066144.1 MGP_LPJ_G0028358.1 mouse_genomes_project 4 91541719 91662413 - Elavl2 protein_coding retained_intron MGP_LPJ_T0066145.1 MGP_LPJ_G0028358.1 mouse_genomes_project 4 91547179 91642872 - MGP_LPJ_P0066145 Elavl2 protein_coding protein_coding MGP_LPJ_T0066146.1 MGP_LPJ_G0028358.1 mouse_genomes_project 4 91592580 91659142 - MGP_LPJ_P0066146 Elavl2 protein_coding protein_coding MGP_LPJ_T0066147.1 MGP_LPJ_G0028358.1 mouse_genomes_project 4 91592674 91658073 - MGP_LPJ_P0066147 Elavl2 protein_coding protein_coding MGP_LPJ_T0066148.1 MGP_LPJ_G0028358.1 mouse_genomes_project 4 91666544 91688025 - Elavl2 protein_coding processed_transcript MGP_LPJ_T0066149.1 MGP_LPJ_G0028358.1 mouse_genomes_project 4 91687943 91690770 - Elavl2 protein_coding processed_transcript MGP_LPJ_T0069410.1 MGP_LPJ_G0029091.1 mouse_genomes_project 4 158160307 158171440 + MGP_LPJ_P0069410 Lrrc47 protein_coding protein_coding MGP_LPJ_T0069411.1 MGP_LPJ_G0029091.1 mouse_genomes_project 4 158160379 158171439 + MGP_LPJ_P0069411 Lrrc47 protein_coding protein_coding MGP_LPJ_T0069412.1 MGP_LPJ_G0029091.1 mouse_genomes_project 4 158165990 158168997 + Lrrc47 protein_coding retained_intron MGP_LPJ_T0069413.1 MGP_LPJ_G0029091.1 mouse_genomes_project 4 158168879 158170818 + MGP_LPJ_P0069413 Lrrc47 protein_coding protein_coding MGP_LPJ_T0069414.1 MGP_LPJ_G0029091.1 mouse_genomes_project 4 158169565 158170594 + MGP_LPJ_P0069414 Lrrc47 protein_coding protein_coding MGP_LPJ_T0100750.1 MGP_LPJ_G0039013.1 mouse_genomes_project 4 41286819 41286949 - Gm23709 snoRNA snoRNA MGP_LPJ_T0004581.1 MGP_LPJ_G0003980.1 mouse_genomes_project 4 140440946 140458785 - antisense antisense MGP_LPJ_T0068776.1 MGP_LPJ_G0028943.1 mouse_genomes_project 4 143982373 144000815 + MGP_LPJ_P0068776 Sdhb protein_coding protein_coding MGP_LPJ_T0068777.1 MGP_LPJ_G0028943.1 mouse_genomes_project 4 143982571 143998349 + Sdhb protein_coding processed_transcript MGP_LPJ_T0068778.1 MGP_LPJ_G0028943.1 mouse_genomes_project 4 143982573 143995844 + Sdhb protein_coding processed_transcript MGP_LPJ_T0067447.1 MGP_LPJ_G0028643.1 mouse_genomes_project 4 124708240 124751096 + Trit1 protein_coding processed_transcript MGP_LPJ_T0067448.1 MGP_LPJ_G0028643.1 mouse_genomes_project 4 124708240 124751096 + MGP_LPJ_P0067448 Trit1 protein_coding protein_coding MGP_LPJ_T0067449.1 MGP_LPJ_G0028643.1 mouse_genomes_project 4 124744902 124750350 + Trit1 protein_coding processed_transcript MGP_LPJ_T0004493.1 MGP_LPJ_G0003916.1 mouse_genomes_project 4 86656162 86657516 + Saxo1os antisense antisense MGP_LPJ_T0067708.1 MGP_LPJ_G0028711.1 mouse_genomes_project 4 129392248 129395621 - MGP_LPJ_P0067708 Gjb5 protein_coding protein_coding MGP_LPJ_T0099521.1 MGP_LPJ_G0037784.1 mouse_genomes_project 4 126152402 126152506 - Gm22983 snRNA snRNA MGP_LPJ_T0099482.1 MGP_LPJ_G0037745.1 mouse_genomes_project 4 43842233 43842340 + Gm22055 snRNA snRNA MGP_LPJ_T0004467.1 MGP_LPJ_G0003892.1 mouse_genomes_project 4 41766602 41787229 + Gm12472 antisense antisense MGP_LPJ_T0014444.1 MGP_LPJ_G0012535.1 mouse_genomes_project 4 30167472 30167847 + processed_pseudogene processed_pseudogene MGP_LPJ_T0067828.1 MGP_LPJ_G0028738.1 mouse_genomes_project 4 131715145 131717548 + MGP_LPJ_P0067828 Marcksl1 protein_coding protein_coding MGP_LPJ_T0102161.1 MGP_LPJ_G0040198.1 mouse_genomes_project 4 124223931 124256928 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0018024.1 MGP_LPJ_G0015483.1 mouse_genomes_project 4 110695887 110702186 - 9630013D21Rik processed_transcript processed_transcript MGP_LPJ_T0018025.1 MGP_LPJ_G0015483.1 mouse_genomes_project 4 110696842 110702212 - 9630013D21Rik processed_transcript processed_transcript MGP_LPJ_T0018026.1 MGP_LPJ_G0015483.1 mouse_genomes_project 4 110696971 110698490 - 9630013D21Rik processed_transcript processed_transcript MGP_LPJ_T0018027.1 MGP_LPJ_G0015483.1 mouse_genomes_project 4 110697309 110701967 - 9630013D21Rik processed_transcript processed_transcript MGP_LPJ_T0067473.1 MGP_LPJ_G0028653.1 mouse_genomes_project 4 125073544 125094666 - MGP_LPJ_P0067473 Macf1 protein_coding protein_coding MGP_LPJ_T0067474.1 MGP_LPJ_G0028653.1 mouse_genomes_project 4 125073544 125432579 - MGP_LPJ_P0067474 Macf1 protein_coding protein_coding MGP_LPJ_T0067475.1 MGP_LPJ_G0028653.1 mouse_genomes_project 4 125073627 125090187 - MGP_LPJ_P0067475 Macf1 protein_coding protein_coding MGP_LPJ_T0067476.1 MGP_LPJ_G0028653.1 mouse_genomes_project 4 125073627 125432579 - MGP_LPJ_P0067476 Macf1 protein_coding protein_coding MGP_LPJ_T0067477.1 MGP_LPJ_G0028653.1 mouse_genomes_project 4 125073627 125279874 - MGP_LPJ_P0067477 Macf1 protein_coding protein_coding MGP_LPJ_T0067478.1 MGP_LPJ_G0028653.1 mouse_genomes_project 4 125073627 125208970 - MGP_LPJ_P0067478 Macf1 protein_coding protein_coding MGP_LPJ_T0067479.1 MGP_LPJ_G0028653.1 mouse_genomes_project 4 125073627 125233783 - MGP_LPJ_P0067479 Macf1 protein_coding protein_coding MGP_LPJ_T0067480.1 MGP_LPJ_G0028653.1 mouse_genomes_project 4 125073627 125097101 - MGP_LPJ_P0067480 Macf1 protein_coding protein_coding MGP_LPJ_T0067481.1 MGP_LPJ_G0028653.1 mouse_genomes_project 4 125073629 125261574 - MGP_LPJ_P0067481 Macf1 protein_coding protein_coding MGP_LPJ_T0067482.1 MGP_LPJ_G0028653.1 mouse_genomes_project 4 125073629 125432579 - MGP_LPJ_P0067482 Macf1 protein_coding protein_coding MGP_LPJ_T0067483.1 MGP_LPJ_G0028653.1 mouse_genomes_project 4 125073631 125432579 - MGP_LPJ_P0067483 Macf1 protein_coding protein_coding MGP_LPJ_T0067484.1 MGP_LPJ_G0028653.1 mouse_genomes_project 4 125108839 125117078 - MGP_LPJ_P0067484 Macf1 protein_coding protein_coding MGP_LPJ_T0067485.1 MGP_LPJ_G0028653.1 mouse_genomes_project 4 125125586 125135806 - Macf1 protein_coding processed_transcript MGP_LPJ_T0067486.1 MGP_LPJ_G0028653.1 mouse_genomes_project 4 125187978 125261722 - MGP_LPJ_P0067486 Macf1 protein_coding protein_coding MGP_LPJ_T0067487.1 MGP_LPJ_G0028653.1 mouse_genomes_project 4 125187978 125409254 - MGP_LPJ_P0067487 Macf1 protein_coding protein_coding MGP_LPJ_T0067488.1 MGP_LPJ_G0028653.1 mouse_genomes_project 4 125273274 125300113 - Macf1 protein_coding processed_transcript MGP_LPJ_T0004617.1 MGP_LPJ_G0004006.1 mouse_genomes_project 4 153101428 153101873 + Ube4bos2 antisense antisense MGP_LPJ_T0067451.1 MGP_LPJ_G0028645.1 mouse_genomes_project 4 124814061 124817525 + MGP_LPJ_P0067451 protein_coding protein_coding MGP_LPJ_T0014660.1 MGP_LPJ_G0012751.1 mouse_genomes_project 4 109721519 109722075 + processed_pseudogene processed_pseudogene MGP_LPJ_T0066094.1 MGP_LPJ_G0028333.1 mouse_genomes_project 4 88300255 88328442 + Focad protein_coding retained_intron MGP_LPJ_T0066095.1 MGP_LPJ_G0028333.1 mouse_genomes_project 4 88300256 88640226 + MGP_LPJ_P0066095 Focad protein_coding protein_coding MGP_LPJ_T0066096.1 MGP_LPJ_G0028333.1 mouse_genomes_project 4 88300271 88394011 + Focad protein_coding retained_intron MGP_LPJ_T0066097.1 MGP_LPJ_G0028333.1 mouse_genomes_project 4 88327928 88640224 + MGP_LPJ_P0066097 Focad protein_coding protein_coding MGP_LPJ_T0066098.1 MGP_LPJ_G0028333.1 mouse_genomes_project 4 88331065 88361592 + Focad protein_coding retained_intron MGP_LPJ_T0066099.1 MGP_LPJ_G0028333.1 mouse_genomes_project 4 88521750 88556965 + Focad protein_coding retained_intron MGP_LPJ_T0066100.1 MGP_LPJ_G0028333.1 mouse_genomes_project 4 88575984 88640229 + Focad protein_coding retained_intron MGP_LPJ_T0066102.1 MGP_LPJ_G0028333.1 mouse_genomes_project 4 88619519 88636439 + Focad protein_coding processed_transcript MGP_LPJ_T0066103.1 MGP_LPJ_G0028333.1 mouse_genomes_project 4 88619734 88640231 + MGP_LPJ_P0066103 Focad protein_coding protein_coding MGP_LPJ_T0066323.1 MGP_LPJ_G0028399.1 mouse_genomes_project 4 100646961 101022001 + MGP_LPJ_P0066323 Ror1 protein_coding protein_coding MGP_LPJ_T0010656.1 MGP_LPJ_G0008774.1 mouse_genomes_project 4 137960769 137960848 - Mir700 miRNA miRNA MGP_LPJ_T0068954.1 MGP_LPJ_G0028999.1 mouse_genomes_project 4 148002814 148013081 - MGP_LPJ_P0068954 Gm13124 protein_coding protein_coding MGP_LPJ_T0014596.1 MGP_LPJ_G0012687.1 mouse_genomes_project 4 88828028 88829596 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065605.1 MGP_LPJ_G0028219.1 mouse_genomes_project 4 53721705 53791775 + MGP_LPJ_P0065605 Zfp462 protein_coding protein_coding MGP_LPJ_T0065606.1 MGP_LPJ_G0028219.1 mouse_genomes_project 4 53724625 53866840 + MGP_LPJ_P0065606 Zfp462 protein_coding protein_coding MGP_LPJ_T0065607.1 MGP_LPJ_G0028219.1 mouse_genomes_project 4 53794841 53864629 + MGP_LPJ_P0065607 Zfp462 protein_coding protein_coding MGP_LPJ_T0065608.1 MGP_LPJ_G0028219.1 mouse_genomes_project 4 53794955 53864601 + MGP_LPJ_P0065608 Zfp462 protein_coding protein_coding MGP_LPJ_T0066222.1 MGP_LPJ_G0028377.1 mouse_genomes_project 4 96942075 96976623 - MGP_LPJ_P0066222 Cyp2j6 protein_coding protein_coding MGP_LPJ_T0014438.1 MGP_LPJ_G0012529.1 mouse_genomes_project 4 27712080 27712615 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010645.1 MGP_LPJ_G0008763.1 mouse_genomes_project 4 131767480 131767609 - Mir8119 miRNA miRNA MGP_LPJ_T0065488.1 MGP_LPJ_G0028183.1 mouse_genomes_project 4 45903994 45909666 - Alg2 protein_coding processed_transcript MGP_LPJ_T0065489.1 MGP_LPJ_G0028183.1 mouse_genomes_project 4 45908728 45913088 - MGP_LPJ_P0065489 Alg2 protein_coding protein_coding MGP_LPJ_T0065490.1 MGP_LPJ_G0028183.1 mouse_genomes_project 4 45910788 45912732 - MGP_LPJ_P0065490 Alg2 protein_coding protein_coding MGP_LPJ_T0007831.1 MGP_LPJ_G0006400.1 mouse_genomes_project 4 20095506 20105887 - 1700025O08Rik lincRNA lincRNA MGP_LPJ_T0065320.1 MGP_LPJ_G0028148.1 mouse_genomes_project 4 42774873 42961928 - MGP_LPJ_P0065320 Pax5 protein_coding protein_coding MGP_LPJ_T0065321.1 MGP_LPJ_G0028148.1 mouse_genomes_project 4 42781261 42961859 - MGP_LPJ_P0065321 Pax5 protein_coding protein_coding MGP_LPJ_T0065322.1 MGP_LPJ_G0028148.1 mouse_genomes_project 4 42781261 42961859 - MGP_LPJ_P0065322 Pax5 protein_coding nonsense_mediated_decay MGP_LPJ_T0065323.1 MGP_LPJ_G0028148.1 mouse_genomes_project 4 42781261 42961859 - MGP_LPJ_P0065323 Pax5 protein_coding protein_coding MGP_LPJ_T0065324.1 MGP_LPJ_G0028148.1 mouse_genomes_project 4 42781261 42961859 - MGP_LPJ_P0065324 Pax5 protein_coding protein_coding MGP_LPJ_T0065325.1 MGP_LPJ_G0028148.1 mouse_genomes_project 4 42781261 42961859 - MGP_LPJ_P0065325 Pax5 protein_coding protein_coding MGP_LPJ_T0065326.1 MGP_LPJ_G0028148.1 mouse_genomes_project 4 42781613 42961849 - MGP_LPJ_P0065326 Pax5 protein_coding protein_coding MGP_LPJ_T0065327.1 MGP_LPJ_G0028148.1 mouse_genomes_project 4 42781613 42961849 - MGP_LPJ_P0065327 Pax5 protein_coding protein_coding MGP_LPJ_T0065328.1 MGP_LPJ_G0028148.1 mouse_genomes_project 4 42781613 42961849 - MGP_LPJ_P0065328 Pax5 protein_coding protein_coding MGP_LPJ_T0065329.1 MGP_LPJ_G0028148.1 mouse_genomes_project 4 42781613 42961849 - MGP_LPJ_P0065329 Pax5 protein_coding nonsense_mediated_decay MGP_LPJ_T0065330.1 MGP_LPJ_G0028148.1 mouse_genomes_project 4 42781613 42961849 - MGP_LPJ_P0065330 Pax5 protein_coding protein_coding MGP_LPJ_T0065331.1 MGP_LPJ_G0028148.1 mouse_genomes_project 4 42781613 42961849 - MGP_LPJ_P0065331 Pax5 protein_coding protein_coding MGP_LPJ_T0065332.1 MGP_LPJ_G0028148.1 mouse_genomes_project 4 42781613 42961849 - MGP_LPJ_P0065332 Pax5 protein_coding protein_coding MGP_LPJ_T0065333.1 MGP_LPJ_G0028148.1 mouse_genomes_project 4 42781620 42896112 - MGP_LPJ_P0065333 Pax5 protein_coding protein_coding MGP_LPJ_T0065334.1 MGP_LPJ_G0028148.1 mouse_genomes_project 4 42820232 42935280 - Pax5 protein_coding processed_transcript MGP_LPJ_T0065335.1 MGP_LPJ_G0028148.1 mouse_genomes_project 4 42930904 42955447 - MGP_LPJ_P0065335 Pax5 protein_coding protein_coding MGP_LPJ_T0065336.1 MGP_LPJ_G0028148.1 mouse_genomes_project 4 42930918 42954854 - Pax5 protein_coding processed_transcript MGP_LPJ_T0065337.1 MGP_LPJ_G0028148.1 mouse_genomes_project 4 42930918 42954854 - Pax5 protein_coding processed_transcript MGP_LPJ_T0065338.1 MGP_LPJ_G0028148.1 mouse_genomes_project 4 42930918 42954854 - Pax5 protein_coding processed_transcript MGP_LPJ_T0065339.1 MGP_LPJ_G0028148.1 mouse_genomes_project 4 42930918 42954854 - MGP_LPJ_P0065339 Pax5 protein_coding protein_coding MGP_LPJ_T0007836.1 MGP_LPJ_G0006405.1 mouse_genomes_project 4 26532206 26533264 + Gm11916 lincRNA lincRNA MGP_LPJ_T0014727.1 MGP_LPJ_G0012818.1 mouse_genomes_project 4 129164249 129164459 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010616.1 MGP_LPJ_G0008734.1 mouse_genomes_project 4 57376778 57376865 - Mir3095 miRNA miRNA MGP_LPJ_T0102142.1 MGP_LPJ_G0040179.1 mouse_genomes_project 4 88929529 88930074 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0007851.1 MGP_LPJ_G0006420.1 mouse_genomes_project 4 43989140 44001777 + Gm829 lincRNA lincRNA MGP_LPJ_T0007852.1 MGP_LPJ_G0006420.1 mouse_genomes_project 4 43989140 44032182 + Gm829 lincRNA lincRNA MGP_LPJ_T0008048.1 MGP_LPJ_G0006571.1 mouse_genomes_project 4 159050894 159052414 + lincRNA lincRNA MGP_LPJ_T0098597.1 MGP_LPJ_G0036871.1 mouse_genomes_project 4 29789659 29803715 + Bach2it1 sense_intronic sense_intronic MGP_LPJ_T0014623.1 MGP_LPJ_G0012714.1 mouse_genomes_project 4 98737653 98738146 - processed_pseudogene processed_pseudogene MGP_LPJ_T0067056.1 MGP_LPJ_G0028550.1 mouse_genomes_project 4 117940819 117942623 - MGP_LPJ_P0067056 Hpdl protein_coding protein_coding MGP_LPJ_T0065412.1 MGP_LPJ_G0028165.1 mouse_genomes_project 4 44288365 44363919 + MGP_LPJ_P0065412 Tdrd7 protein_coding protein_coding MGP_LPJ_T0065413.1 MGP_LPJ_G0028165.1 mouse_genomes_project 4 44295268 44363919 + MGP_LPJ_P0065413 Tdrd7 protein_coding protein_coding MGP_LPJ_T0065414.1 MGP_LPJ_G0028165.1 mouse_genomes_project 4 44295869 44311795 + Tdrd7 protein_coding processed_transcript MGP_LPJ_T0065415.1 MGP_LPJ_G0028165.1 mouse_genomes_project 4 44314292 44329706 + Tdrd7 protein_coding processed_transcript MGP_LPJ_T0065416.1 MGP_LPJ_G0028165.1 mouse_genomes_project 4 44352119 44363919 + Tdrd7 protein_coding processed_transcript MGP_LPJ_T0100797.1 MGP_LPJ_G0039060.1 mouse_genomes_project 4 125005174 125005305 + Gm25788 snoRNA snoRNA MGP_LPJ_T0100753.1 MGP_LPJ_G0039016.1 mouse_genomes_project 4 46378432 46378575 + Gm22670 snoRNA snoRNA MGP_LPJ_T0014483.1 MGP_LPJ_G0012574.1 mouse_genomes_project 4 44088504 44088832 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065935.1 MGP_LPJ_G0028307.1 mouse_genomes_project 4 79862823 79863336 - MGP_LPJ_P0065935 mt-Nd6 protein_coding protein_coding MGP_LPJ_T0014614.1 MGP_LPJ_G0012705.1 mouse_genomes_project 4 94769287 94769875 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008007.1 MGP_LPJ_G0006534.1 mouse_genomes_project 4 136211801 136212995 + Gm12974 lincRNA lincRNA MGP_LPJ_T0014570.1 MGP_LPJ_G0012661.1 mouse_genomes_project 4 76525372 76525609 - processed_pseudogene processed_pseudogene MGP_LPJ_T0067365.1 MGP_LPJ_G0028620.1 mouse_genomes_project 4 121782423 121833913 + Scmh1 protein_coding processed_transcript MGP_LPJ_T0067366.1 MGP_LPJ_G0028620.1 mouse_genomes_project 4 121782449 121912094 + MGP_LPJ_P0067366 Scmh1 protein_coding protein_coding MGP_LPJ_T0067367.1 MGP_LPJ_G0028620.1 mouse_genomes_project 4 121782508 121843443 + Scmh1 protein_coding processed_transcript MGP_LPJ_T0067368.1 MGP_LPJ_G0028620.1 mouse_genomes_project 4 121782523 121828125 + Scmh1 protein_coding processed_transcript MGP_LPJ_T0067369.1 MGP_LPJ_G0028620.1 mouse_genomes_project 4 121782570 121843408 + MGP_LPJ_P0067369 Scmh1 protein_coding protein_coding MGP_LPJ_T0067370.1 MGP_LPJ_G0028620.1 mouse_genomes_project 4 121826539 121912094 + MGP_LPJ_P0067370 Scmh1 protein_coding protein_coding MGP_LPJ_T0067371.1 MGP_LPJ_G0028620.1 mouse_genomes_project 4 121832640 121912072 + MGP_LPJ_P0067371 Scmh1 protein_coding protein_coding MGP_LPJ_T0067372.1 MGP_LPJ_G0028620.1 mouse_genomes_project 4 121842403 121911169 + MGP_LPJ_P0067372 Scmh1 protein_coding protein_coding MGP_LPJ_T0067373.1 MGP_LPJ_G0028620.1 mouse_genomes_project 4 121885833 121912094 + Scmh1 protein_coding processed_transcript MGP_LPJ_T0067374.1 MGP_LPJ_G0028620.1 mouse_genomes_project 4 121887359 121904546 + MGP_LPJ_P0067374 Scmh1 protein_coding protein_coding MGP_LPJ_T0067375.1 MGP_LPJ_G0028620.1 mouse_genomes_project 4 121899578 121912094 + Scmh1 protein_coding processed_transcript MGP_LPJ_T0067376.1 MGP_LPJ_G0028620.1 mouse_genomes_project 4 121899631 121911711 + Scmh1 protein_coding processed_transcript MGP_LPJ_T0067377.1 MGP_LPJ_G0028620.1 mouse_genomes_project 4 121909738 121911130 + Scmh1 protein_coding processed_transcript MGP_LPJ_T0067378.1 MGP_LPJ_G0028620.1 mouse_genomes_project 4 121911064 121912096 + Scmh1 protein_coding processed_transcript MGP_LPJ_T0017996.1 MGP_LPJ_G0015462.1 mouse_genomes_project 4 51527615 51543545 + 4930552N02Rik processed_transcript processed_transcript MGP_LPJ_T0067813.1 MGP_LPJ_G0028734.1 mouse_genomes_project 4 131626074 131641125 - MGP_LPJ_P0067813 Zbtb8b protein_coding protein_coding MGP_LPJ_T0067814.1 MGP_LPJ_G0028734.1 mouse_genomes_project 4 131626074 131641090 - MGP_LPJ_P0067814 Zbtb8b protein_coding protein_coding MGP_LPJ_T0067815.1 MGP_LPJ_G0028734.1 mouse_genomes_project 4 131626581 131632831 - Zbtb8b protein_coding processed_transcript MGP_LPJ_T0067816.1 MGP_LPJ_G0028734.1 mouse_genomes_project 4 131629446 131641092 - Zbtb8b protein_coding retained_intron MGP_LPJ_T0001443.1 MGP_LPJ_G0001362.1 mouse_genomes_project 4 99812546 99815008 + TEC TEC MGP_LPJ_T0014415.1 MGP_LPJ_G0012506.1 mouse_genomes_project 4 22531886 22532580 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007821.1 MGP_LPJ_G0006391.1 mouse_genomes_project 4 8785547 8795117 - Gm11840 lincRNA lincRNA MGP_LPJ_T0014700.1 MGP_LPJ_G0012791.1 mouse_genomes_project 4 122321202 122321640 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007919.1 MGP_LPJ_G0006476.1 mouse_genomes_project 4 101880216 101881199 + Gm12801 lincRNA lincRNA MGP_LPJ_T0102139.1 MGP_LPJ_G0040176.1 mouse_genomes_project 4 88844567 88845959 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0066353.1 MGP_LPJ_G0028407.1 mouse_genomes_project 4 102270139 102282519 + MGP_LPJ_P0066353 Leprot protein_coding protein_coding MGP_LPJ_T0066354.1 MGP_LPJ_G0028407.1 mouse_genomes_project 4 102270214 102282519 + MGP_LPJ_P0066354 Leprot protein_coding protein_coding MGP_LPJ_T0100733.1 MGP_LPJ_G0038996.1 mouse_genomes_project 4 2261155 2261281 - Gm24337 snoRNA snoRNA MGP_LPJ_T0004577.1 MGP_LPJ_G0003976.1 mouse_genomes_project 4 137843389 137845594 + Gm12984 antisense antisense MGP_LPJ_T0007886.1 MGP_LPJ_G0006448.1 mouse_genomes_project 4 67755125 67764360 - Gm12911 lincRNA lincRNA MGP_LPJ_T0065389.1 MGP_LPJ_G0028159.1 mouse_genomes_project 4 43686907 43698663 - MGP_LPJ_P0065389 Slc25a51 protein_coding protein_coding MGP_LPJ_T0065390.1 MGP_LPJ_G0028159.1 mouse_genomes_project 4 43689166 43698657 - MGP_LPJ_P0065390 Slc25a51 protein_coding protein_coding MGP_LPJ_T0065391.1 MGP_LPJ_G0028159.1 mouse_genomes_project 4 43689527 43694778 - MGP_LPJ_P0065391 Slc25a51 protein_coding protein_coding MGP_LPJ_T0065392.1 MGP_LPJ_G0028159.1 mouse_genomes_project 4 43697068 43698632 - Slc25a51 protein_coding processed_transcript MGP_LPJ_T0004625.1 MGP_LPJ_G0004012.1 mouse_genomes_project 4 154481078 154484298 - antisense antisense MGP_LPJ_T0069049.1 MGP_LPJ_G0029024.1 mouse_genomes_project 4 151818447 151827942 + MGP_LPJ_P0069049 Fbxo2 protein_coding protein_coding MGP_LPJ_T0066923.1 MGP_LPJ_G0028526.1 mouse_genomes_project 4 116976645 116987147 - MGP_LPJ_P0066923 Dmbx1 protein_coding protein_coding MGP_LPJ_T0066924.1 MGP_LPJ_G0028526.1 mouse_genomes_project 4 116976645 117001299 - MGP_LPJ_P0066924 Dmbx1 protein_coding protein_coding MGP_LPJ_T0066925.1 MGP_LPJ_G0028526.1 mouse_genomes_project 4 116976646 117001299 - MGP_LPJ_P0066925 Dmbx1 protein_coding protein_coding MGP_LPJ_T0068426.1 MGP_LPJ_G0028855.1 mouse_genomes_project 4 138037643 138065175 + Stpg1 protein_coding processed_transcript MGP_LPJ_T0068427.1 MGP_LPJ_G0028855.1 mouse_genomes_project 4 138038827 138081490 + Stpg1 protein_coding processed_transcript MGP_LPJ_T0068428.1 MGP_LPJ_G0028855.1 mouse_genomes_project 4 138038837 138085299 + MGP_LPJ_P0068428 Stpg1 protein_coding protein_coding MGP_LPJ_T0099493.1 MGP_LPJ_G0037756.1 mouse_genomes_project 4 86115066 86115167 - Gm25811 snRNA snRNA MGP_LPJ_T0008033.1 MGP_LPJ_G0006556.1 mouse_genomes_project 4 145485935 145525351 - Gm13052 lincRNA lincRNA MGP_LPJ_T0098262.1 MGP_LPJ_G0036543.1 mouse_genomes_project 4 112554711 112554827 - n-R5s191 rRNA rRNA MGP_LPJ_T0014606.1 MGP_LPJ_G0012697.1 mouse_genomes_project 4 91651479 91652043 + processed_pseudogene processed_pseudogene MGP_LPJ_T0067683.1 MGP_LPJ_G0028703.1 mouse_genomes_project 4 129047395 129062737 - MGP_LPJ_P0067683 Zmym1 protein_coding protein_coding MGP_LPJ_T0067684.1 MGP_LPJ_G0028703.1 mouse_genomes_project 4 129047894 129060582 - MGP_LPJ_P0067684 Zmym1 protein_coding protein_coding MGP_LPJ_T0067685.1 MGP_LPJ_G0028703.1 mouse_genomes_project 4 129047943 129062645 - Zmym1 protein_coding processed_transcript MGP_LPJ_T0067686.1 MGP_LPJ_G0028703.1 mouse_genomes_project 4 129047943 129062709 - MGP_LPJ_P0067686 Zmym1 protein_coding protein_coding MGP_LPJ_T0067687.1 MGP_LPJ_G0028703.1 mouse_genomes_project 4 129048966 129060477 - Zmym1 protein_coding processed_transcript MGP_LPJ_T0067688.1 MGP_LPJ_G0028703.1 mouse_genomes_project 4 129054589 129059170 - Zmym1 protein_coding processed_transcript MGP_LPJ_T0067689.1 MGP_LPJ_G0028703.1 mouse_genomes_project 4 129054628 129062671 - MGP_LPJ_P0067689 Zmym1 protein_coding protein_coding MGP_LPJ_T0004527.1 MGP_LPJ_G0003936.1 mouse_genomes_project 4 110428354 110428802 - Ttc39aos1 antisense antisense MGP_LPJ_T0004528.1 MGP_LPJ_G0003936.1 mouse_genomes_project 4 110428401 110430751 - Ttc39aos1 antisense antisense MGP_LPJ_T0014598.1 MGP_LPJ_G0012689.1 mouse_genomes_project 4 89445791 89452834 + processed_pseudogene processed_pseudogene MGP_LPJ_T0018020.1 MGP_LPJ_G0015479.1 mouse_genomes_project 4 104230091 104242973 - Gm12720 processed_transcript processed_transcript MGP_LPJ_T0066886.1 MGP_LPJ_G0028518.1 mouse_genomes_project 4 116609735 116623685 + MGP_LPJ_P0066886 Cyp4a31 protein_coding protein_coding MGP_LPJ_T0066889.1 MGP_LPJ_G0028518.1 mouse_genomes_project 4 116609794 116618298 + Cyp4a31 protein_coding processed_transcript MGP_LPJ_T0066107.1 MGP_LPJ_G0028336.1 mouse_genomes_project 4 88787668 88788241 - MGP_LPJ_P0066107 Ifna15 protein_coding protein_coding MGP_LPJ_T0066864.1 MGP_LPJ_G0028508.1 mouse_genomes_project 4 116028231 116048182 + MGP_LPJ_P0066864 Tal1 protein_coding protein_coding MGP_LPJ_T0066865.1 MGP_LPJ_G0028508.1 mouse_genomes_project 4 116029243 116040016 + MGP_LPJ_P0066865 Tal1 protein_coding protein_coding MGP_LPJ_T0066866.1 MGP_LPJ_G0028508.1 mouse_genomes_project 4 116029616 116047654 + MGP_LPJ_P0066866 Tal1 protein_coding protein_coding MGP_LPJ_T0066867.1 MGP_LPJ_G0028508.1 mouse_genomes_project 4 116031313 116046898 + MGP_LPJ_P0066867 Tal1 protein_coding protein_coding MGP_LPJ_T0098038.1 MGP_LPJ_G0036319.1 mouse_genomes_project 4 144642561 144644265 + pseudogene pseudogene MGP_LPJ_T0007887.1 MGP_LPJ_G0006449.1 mouse_genomes_project 4 70602876 70647692 - Gm11228 lincRNA lincRNA MGP_LPJ_T0014712.1 MGP_LPJ_G0012803.1 mouse_genomes_project 4 125166138 125166456 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014528.1 MGP_LPJ_G0012619.1 mouse_genomes_project 4 57542343 57542760 + processed_pseudogene processed_pseudogene MGP_LPJ_T0069093.1 MGP_LPJ_G0029034.1 mouse_genomes_project 4 152533236 152684198 + MGP_LPJ_P0069093 Casz1 protein_coding protein_coding MGP_LPJ_T0069094.1 MGP_LPJ_G0029034.1 mouse_genomes_project 4 152533236 152693762 + MGP_LPJ_P0069094 Casz1 protein_coding protein_coding MGP_LPJ_T0069095.1 MGP_LPJ_G0029034.1 mouse_genomes_project 4 152533272 152572174 + Casz1 protein_coding processed_transcript MGP_LPJ_T0069096.1 MGP_LPJ_G0029034.1 mouse_genomes_project 4 152625051 152627592 + Casz1 protein_coding processed_transcript MGP_LPJ_T0069097.1 MGP_LPJ_G0029034.1 mouse_genomes_project 4 152636681 152669889 + MGP_LPJ_P0069097 Casz1 protein_coding protein_coding MGP_LPJ_T0069098.1 MGP_LPJ_G0029034.1 mouse_genomes_project 4 152670106 152677502 + MGP_LPJ_P0069098 Casz1 protein_coding protein_coding MGP_LPJ_T0066250.1 MGP_LPJ_G0028385.1 mouse_genomes_project 4 98873256 98885971 + Inadl protein_coding processed_transcript MGP_LPJ_T0066251.1 MGP_LPJ_G0028385.1 mouse_genomes_project 4 98873262 99208528 + MGP_LPJ_P0066251 Inadl protein_coding protein_coding MGP_LPJ_T0066252.1 MGP_LPJ_G0028385.1 mouse_genomes_project 4 98873326 99148132 + MGP_LPJ_P0066252 Inadl protein_coding protein_coding MGP_LPJ_T0066253.1 MGP_LPJ_G0028385.1 mouse_genomes_project 4 98873326 99032536 + MGP_LPJ_P0066253 Inadl protein_coding protein_coding MGP_LPJ_T0066254.1 MGP_LPJ_G0028385.1 mouse_genomes_project 4 98873363 98938099 + MGP_LPJ_P0066254 Inadl protein_coding protein_coding MGP_LPJ_T0066255.1 MGP_LPJ_G0028385.1 mouse_genomes_project 4 98898252 98913507 + Inadl protein_coding processed_transcript MGP_LPJ_T0066256.1 MGP_LPJ_G0028385.1 mouse_genomes_project 4 98918588 98922783 + Inadl protein_coding processed_transcript MGP_LPJ_T0066257.1 MGP_LPJ_G0028385.1 mouse_genomes_project 4 98922721 98981746 + MGP_LPJ_P0066257 Inadl protein_coding protein_coding MGP_LPJ_T0066258.1 MGP_LPJ_G0028385.1 mouse_genomes_project 4 98933138 99207283 + MGP_LPJ_P0066258 Inadl protein_coding protein_coding MGP_LPJ_T0066259.1 MGP_LPJ_G0028385.1 mouse_genomes_project 4 98979170 98992282 + Inadl protein_coding processed_transcript MGP_LPJ_T0066260.1 MGP_LPJ_G0028385.1 mouse_genomes_project 4 99003726 99017093 + MGP_LPJ_P0066260 Inadl protein_coding protein_coding MGP_LPJ_T0066261.1 MGP_LPJ_G0028385.1 mouse_genomes_project 4 99024616 99208528 + MGP_LPJ_P0066261 Inadl protein_coding protein_coding MGP_LPJ_T0066262.1 MGP_LPJ_G0028385.1 mouse_genomes_project 4 99024855 99167802 + MGP_LPJ_P0066262 Inadl protein_coding protein_coding MGP_LPJ_T0014770.1 MGP_LPJ_G0012861.1 mouse_genomes_project 4 147963336 147963968 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014742.1 MGP_LPJ_G0012833.1 mouse_genomes_project 4 136963489 136964242 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100765.1 MGP_LPJ_G0039028.1 mouse_genomes_project 4 55785408 55785534 + Gm22300 snoRNA snoRNA MGP_LPJ_T0068940.1 MGP_LPJ_G0028986.1 mouse_genomes_project 4 147078095 147081603 + MGP_LPJ_P0068940 protein_coding protein_coding MGP_LPJ_T0010670.1 MGP_LPJ_G0008788.1 mouse_genomes_project 4 144416195 144416272 + Gm25690 miRNA miRNA MGP_LPJ_T0010588.1 MGP_LPJ_G0008706.1 mouse_genomes_project 4 6319650 6319722 + Gm25677 miRNA miRNA MGP_LPJ_T0068770.1 MGP_LPJ_G0028940.1 mouse_genomes_project 4 143797646 143822754 - MGP_LPJ_P0068770 Padi3 protein_coding protein_coding MGP_LPJ_T0068771.1 MGP_LPJ_G0028940.1 mouse_genomes_project 4 143797650 143816322 - MGP_LPJ_P0068771 Padi3 protein_coding protein_coding MGP_LPJ_T0004488.1 MGP_LPJ_G0003911.1 mouse_genomes_project 4 71740261 71740943 + Gm11250 antisense antisense MGP_LPJ_T0066540.1 MGP_LPJ_G0028447.1 mouse_genomes_project 4 108051210 108074404 + MGP_LPJ_P0066540 Tmem59 protein_coding protein_coding MGP_LPJ_T0066541.1 MGP_LPJ_G0028447.1 mouse_genomes_project 4 108051338 108063508 + MGP_LPJ_P0066541 Tmem59 protein_coding protein_coding MGP_LPJ_T0066542.1 MGP_LPJ_G0028447.1 mouse_genomes_project 4 108051338 108074106 + MGP_LPJ_P0066542 Tmem59 protein_coding protein_coding MGP_LPJ_T0066543.1 MGP_LPJ_G0028447.1 mouse_genomes_project 4 108051478 108063711 + Tmem59 protein_coding retained_intron MGP_LPJ_T0066544.1 MGP_LPJ_G0028447.1 mouse_genomes_project 4 108051537 108073914 + MGP_LPJ_P0066544 Tmem59 protein_coding nonsense_mediated_decay MGP_LPJ_T0066545.1 MGP_LPJ_G0028447.1 mouse_genomes_project 4 108051829 108074402 + Tmem59 protein_coding processed_transcript MGP_LPJ_T0064621.1 MGP_LPJ_G0027993.1 mouse_genomes_project 4 11792329 11845189 + MGP_LPJ_P0064621 Tmem55a protein_coding protein_coding MGP_LPJ_T0066679.1 MGP_LPJ_G0028470.1 mouse_genomes_project 4 109555073 109558914 - Prpf38a protein_coding processed_transcript MGP_LPJ_T0066680.1 MGP_LPJ_G0028470.1 mouse_genomes_project 4 109556771 109571407 - MGP_LPJ_P0066680 Prpf38a protein_coding protein_coding MGP_LPJ_T0066681.1 MGP_LPJ_G0028470.1 mouse_genomes_project 4 109556774 109565364 - Prpf38a protein_coding processed_transcript MGP_LPJ_T0067970.1 MGP_LPJ_G0028761.1 mouse_genomes_project 4 132642190 132649064 + MGP_LPJ_P0067970 protein_coding protein_coding MGP_LPJ_T0014554.1 MGP_LPJ_G0012645.1 mouse_genomes_project 4 73060546 73061721 - processed_pseudogene processed_pseudogene MGP_LPJ_T0067471.1 MGP_LPJ_G0028652.1 mouse_genomes_project 4 125028962 125066707 - MGP_LPJ_P0067471 Bmp8a protein_coding protein_coding MGP_LPJ_T0067472.1 MGP_LPJ_G0028652.1 mouse_genomes_project 4 125028962 125066258 - MGP_LPJ_P0067472 Bmp8a protein_coding protein_coding MGP_LPJ_T0065536.1 MGP_LPJ_G0028198.1 mouse_genomes_project 4 48081164 48092346 + MGP_LPJ_P0065536 Zfp189 protein_coding protein_coding MGP_LPJ_T0065537.1 MGP_LPJ_G0028198.1 mouse_genomes_project 4 48081205 48092346 + MGP_LPJ_P0065537 Zfp189 protein_coding protein_coding MGP_LPJ_T0067419.1 MGP_LPJ_G0028633.1 mouse_genomes_project 4 122537037 122540613 - MGP_LPJ_P0067419 Tmco2 protein_coding protein_coding MGP_LPJ_T0010677.1 MGP_LPJ_G0008795.1 mouse_genomes_project 4 160362612 160362695 - Mir429 miRNA miRNA MGP_LPJ_T0004532.1 MGP_LPJ_G0003939.1 mouse_genomes_project 4 116113659 116117766 + Cyp4x1os antisense antisense MGP_LPJ_T0010614.1 MGP_LPJ_G0008732.1 mouse_genomes_project 4 46682430 46682527 - Mir1958 miRNA miRNA MGP_LPJ_T0066366.1 MGP_LPJ_G0028413.1 mouse_genomes_project 4 102640555 102644132 + MGP_LPJ_P0066366 Gm12789 protein_coding protein_coding MGP_LPJ_T0067706.1 MGP_LPJ_G0028710.1 mouse_genomes_project 4 129388525 129391521 - MGP_LPJ_P0067706 Gjb4 protein_coding protein_coding MGP_LPJ_T0067707.1 MGP_LPJ_G0028710.1 mouse_genomes_project 4 129388525 129391521 - MGP_LPJ_P0067707 Gjb4 protein_coding protein_coding MGP_LPJ_T0008035.1 MGP_LPJ_G0006558.1 mouse_genomes_project 4 152031707 152034713 - Gm13200 lincRNA lincRNA MGP_LPJ_T0066301.1 MGP_LPJ_G0028393.1 mouse_genomes_project 4 99839518 99840939 + MGP_LPJ_P0066301 Gm12689 protein_coding protein_coding MGP_LPJ_T0014687.1 MGP_LPJ_G0012778.1 mouse_genomes_project 4 118941314 118941637 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014436.1 MGP_LPJ_G0012527.1 mouse_genomes_project 4 26643425 26644146 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010615.1 MGP_LPJ_G0008733.1 mouse_genomes_project 4 55765111 55765181 - Mir32 miRNA miRNA MGP_LPJ_T0099464.1 MGP_LPJ_G0037727.1 mouse_genomes_project 4 12314738 12314845 + Gm24317 snRNA snRNA MGP_LPJ_T0014713.1 MGP_LPJ_G0012804.1 mouse_genomes_project 4 125371518 125371927 + processed_pseudogene processed_pseudogene MGP_LPJ_T0064444.1 MGP_LPJ_G0027956.1 mouse_genomes_project 4 668851 674455 - MGP_LPJ_P0064444 Penk protein_coding protein_coding MGP_LPJ_T0064445.1 MGP_LPJ_G0027956.1 mouse_genomes_project 4 668879 674797 - MGP_LPJ_P0064445 Penk protein_coding protein_coding MGP_LPJ_T0068766.1 MGP_LPJ_G0028939.1 mouse_genomes_project 4 143752795 143784779 - MGP_LPJ_P0068766 Padi4 protein_coding protein_coding MGP_LPJ_T0068767.1 MGP_LPJ_G0028939.1 mouse_genomes_project 4 143759176 143764815 - Padi4 protein_coding processed_transcript MGP_LPJ_T0068768.1 MGP_LPJ_G0028939.1 mouse_genomes_project 4 143762793 143768663 - Padi4 protein_coding processed_transcript MGP_LPJ_T0068769.1 MGP_LPJ_G0028939.1 mouse_genomes_project 4 143764983 143768656 - Padi4 protein_coding processed_transcript MGP_LPJ_T0068006.1 MGP_LPJ_G0028769.1 mouse_genomes_project 4 134024107 134098930 - MGP_LPJ_P0068006 Ptpru protein_coding unknown_likely_coding MGP_LPJ_T0068007.1 MGP_LPJ_G0028769.1 mouse_genomes_project 4 134024111 134099062 - MGP_LPJ_P0068007 Ptpru protein_coding protein_coding MGP_LPJ_T0068008.1 MGP_LPJ_G0028769.1 mouse_genomes_project 4 134024112 134024576 - Ptpru protein_coding processed_transcript MGP_LPJ_T0068009.1 MGP_LPJ_G0028769.1 mouse_genomes_project 4 134025152 134099005 - MGP_LPJ_P0068009 Ptpru protein_coding protein_coding MGP_LPJ_T0068010.1 MGP_LPJ_G0028769.1 mouse_genomes_project 4 134027790 134099026 - Ptpru protein_coding processed_transcript MGP_LPJ_T0068011.1 MGP_LPJ_G0028769.1 mouse_genomes_project 4 134038861 134082299 - MGP_LPJ_P0068011 Ptpru protein_coding protein_coding MGP_LPJ_T0068012.1 MGP_LPJ_G0028769.1 mouse_genomes_project 4 134044164 134060346 - Ptpru protein_coding processed_transcript MGP_LPJ_T0068013.1 MGP_LPJ_G0028769.1 mouse_genomes_project 4 134049231 134054003 - Ptpru protein_coding retained_intron MGP_LPJ_T0068014.1 MGP_LPJ_G0028769.1 mouse_genomes_project 4 134057089 134060970 - Ptpru protein_coding retained_intron MGP_LPJ_T0069202.1 MGP_LPJ_G0029055.1 mouse_genomes_project 4 154055764 154072795 - MGP_LPJ_P0069202 Car6 protein_coding protein_coding MGP_LPJ_T0069203.1 MGP_LPJ_G0029055.1 mouse_genomes_project 4 154055764 154068952 - MGP_LPJ_P0069203 Car6 protein_coding protein_coding MGP_LPJ_T0069204.1 MGP_LPJ_G0029055.1 mouse_genomes_project 4 154055961 154066605 - Car6 protein_coding processed_transcript MGP_LPJ_T0069205.1 MGP_LPJ_G0029055.1 mouse_genomes_project 4 154057030 154068685 - Car6 protein_coding processed_transcript MGP_LPJ_T0014753.1 MGP_LPJ_G0012844.1 mouse_genomes_project 4 139244609 139245098 - processed_pseudogene processed_pseudogene MGP_LPJ_T0066547.1 MGP_LPJ_G0028449.1 mouse_genomes_project 4 108106852 108126851 - MGP_LPJ_P0066547 Lrrc42 protein_coding protein_coding MGP_LPJ_T0066548.1 MGP_LPJ_G0028449.1 mouse_genomes_project 4 108106855 108116851 - Lrrc42 protein_coding retained_intron MGP_LPJ_T0066549.1 MGP_LPJ_G0028449.1 mouse_genomes_project 4 108107095 108109317 - Lrrc42 protein_coding retained_intron MGP_LPJ_T0066550.1 MGP_LPJ_G0028449.1 mouse_genomes_project 4 108107275 108113077 - MGP_LPJ_P0066550 Lrrc42 protein_coding protein_coding MGP_LPJ_T0066551.1 MGP_LPJ_G0028449.1 mouse_genomes_project 4 108120731 108126479 - MGP_LPJ_P0066551 Lrrc42 protein_coding protein_coding MGP_LPJ_T0010590.1 MGP_LPJ_G0008708.1 mouse_genomes_project 4 7582088 7582195 + n-TSaga9 miRNA miRNA MGP_LPJ_T0014481.1 MGP_LPJ_G0012572.1 mouse_genomes_project 4 43405708 43406067 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065673.1 MGP_LPJ_G0028238.1 mouse_genomes_project 4 56970379 57143794 - MGP_LPJ_P0065673 Svep1 protein_coding protein_coding MGP_LPJ_T0065674.1 MGP_LPJ_G0028238.1 mouse_genomes_project 4 57077543 57143810 - Svep1 protein_coding processed_transcript MGP_LPJ_T0065675.1 MGP_LPJ_G0028238.1 mouse_genomes_project 4 57078906 57144056 - Svep1 protein_coding processed_transcript MGP_LPJ_T0065676.1 MGP_LPJ_G0028238.1 mouse_genomes_project 4 57114768 57143886 - Svep1 protein_coding processed_transcript MGP_LPJ_T0067083.1 MGP_LPJ_G0028556.1 mouse_genomes_project 4 118256996 118260079 - Btbd19 protein_coding processed_transcript MGP_LPJ_T0067084.1 MGP_LPJ_G0028556.1 mouse_genomes_project 4 118257625 118260134 - Btbd19 protein_coding processed_transcript MGP_LPJ_T0067085.1 MGP_LPJ_G0028556.1 mouse_genomes_project 4 118257923 118263400 - MGP_LPJ_P0067085 Btbd19 protein_coding protein_coding MGP_LPJ_T0067086.1 MGP_LPJ_G0028556.1 mouse_genomes_project 4 118258399 118260108 - Btbd19 protein_coding processed_transcript MGP_LPJ_T0067087.1 MGP_LPJ_G0028556.1 mouse_genomes_project 4 118258454 118259014 - Btbd19 protein_coding retained_intron MGP_LPJ_T0067088.1 MGP_LPJ_G0028556.1 mouse_genomes_project 4 118258477 118259626 - Btbd19 protein_coding retained_intron MGP_LPJ_T0067089.1 MGP_LPJ_G0028556.1 mouse_genomes_project 4 118259061 118263507 - MGP_LPJ_P0067089 Btbd19 protein_coding nonsense_mediated_decay MGP_LPJ_T0067090.1 MGP_LPJ_G0028556.1 mouse_genomes_project 4 118259188 118263440 - MGP_LPJ_P0067090 Btbd19 protein_coding nonsense_mediated_decay MGP_LPJ_T0067091.1 MGP_LPJ_G0028556.1 mouse_genomes_project 4 118261733 118262948 - Btbd19 protein_coding processed_transcript MGP_LPJ_T0065053.1 MGP_LPJ_G0028103.1 mouse_genomes_project 4 40827632 40969789 + MGP_LPJ_P0065053 4930578G10Rik protein_coding protein_coding MGP_LPJ_T0064921.1 MGP_LPJ_G0028069.1 mouse_genomes_project 4 38692592 38720359 - MGP_LPJ_P0064921 Smu1 protein_coding protein_coding MGP_LPJ_T0064922.1 MGP_LPJ_G0028069.1 mouse_genomes_project 4 38693347 38720280 - MGP_LPJ_P0064922 Smu1 protein_coding unknown_likely_coding MGP_LPJ_T0064923.1 MGP_LPJ_G0028069.1 mouse_genomes_project 4 38700304 38720319 - Smu1 protein_coding processed_transcript MGP_LPJ_T0064924.1 MGP_LPJ_G0028069.1 mouse_genomes_project 4 38716896 38720267 - Smu1 protein_coding processed_transcript MGP_LPJ_T0064925.1 MGP_LPJ_G0028069.1 mouse_genomes_project 4 38718180 38719834 - Smu1 protein_coding processed_transcript MGP_LPJ_T0069024.1 MGP_LPJ_G0029020.1 mouse_genomes_project 4 151749879 151783241 - MGP_LPJ_P0069024 Draxin protein_coding protein_coding MGP_LPJ_T0067452.1 MGP_LPJ_G0028646.1 mouse_genomes_project 4 124814086 124817525 + MGP_LPJ_P0067452 Oxct2a protein_coding protein_coding MGP_LPJ_T0067980.1 MGP_LPJ_G0028764.1 mouse_genomes_project 4 132736692 132780119 + MGP_LPJ_P0067980 Nkain1 protein_coding protein_coding MGP_LPJ_T0067981.1 MGP_LPJ_G0028764.1 mouse_genomes_project 4 132736899 132780135 + MGP_LPJ_P0067981 Nkain1 protein_coding nonsense_mediated_decay MGP_LPJ_T0067982.1 MGP_LPJ_G0028764.1 mouse_genomes_project 4 132752593 132772720 + Nkain1 protein_coding processed_transcript MGP_LPJ_T0064570.1 MGP_LPJ_G0027979.1 mouse_genomes_project 4 8311728 8347678 + Rad54b protein_coding processed_transcript MGP_LPJ_T0064571.1 MGP_LPJ_G0027979.1 mouse_genomes_project 4 8311748 8339768 + MGP_LPJ_P0064571 Rad54b protein_coding protein_coding MGP_LPJ_T0064572.1 MGP_LPJ_G0027979.1 mouse_genomes_project 4 8311755 8331421 + MGP_LPJ_P0064572 Rad54b protein_coding protein_coding MGP_LPJ_T0064573.1 MGP_LPJ_G0027979.1 mouse_genomes_project 4 8311778 8371302 + MGP_LPJ_P0064573 Rad54b protein_coding protein_coding MGP_LPJ_T0064574.1 MGP_LPJ_G0027979.1 mouse_genomes_project 4 8329106 8349816 + Rad54b protein_coding processed_transcript MGP_LPJ_T0064576.1 MGP_LPJ_G0027979.1 mouse_genomes_project 4 8349915 8360906 + MGP_LPJ_P0064576 Rad54b protein_coding nonsense_mediated_decay MGP_LPJ_T0064577.1 MGP_LPJ_G0027979.1 mouse_genomes_project 4 8364136 8365541 + Rad54b protein_coding retained_intron MGP_LPJ_T0007900.1 MGP_LPJ_G0006460.1 mouse_genomes_project 4 87482050 87484959 + Gm12600 lincRNA lincRNA MGP_LPJ_T0068604.1 MGP_LPJ_G0028899.1 mouse_genomes_project 4 140785349 140926712 + MGP_LPJ_P0068604 Eif4g3 protein_coding protein_coding MGP_LPJ_T0068605.1 MGP_LPJ_G0028899.1 mouse_genomes_project 4 140785349 140914908 + MGP_LPJ_P0068605 Eif4g3 protein_coding protein_coding MGP_LPJ_T0068606.1 MGP_LPJ_G0028899.1 mouse_genomes_project 4 140785349 140904083 + MGP_LPJ_P0068606 Eif4g3 protein_coding protein_coding MGP_LPJ_T0068607.1 MGP_LPJ_G0028899.1 mouse_genomes_project 4 140785783 141009923 + MGP_LPJ_P0068607 Eif4g3 protein_coding protein_coding MGP_LPJ_T0068608.1 MGP_LPJ_G0028899.1 mouse_genomes_project 4 140785783 141009923 + MGP_LPJ_P0068608 Eif4g3 protein_coding protein_coding MGP_LPJ_T0068609.1 MGP_LPJ_G0028899.1 mouse_genomes_project 4 140785803 140786478 + Eif4g3 protein_coding processed_transcript MGP_LPJ_T0068610.1 MGP_LPJ_G0028899.1 mouse_genomes_project 4 140785811 140856880 + Eif4g3 protein_coding processed_transcript MGP_LPJ_T0068611.1 MGP_LPJ_G0028899.1 mouse_genomes_project 4 140785840 141009019 + MGP_LPJ_P0068611 Eif4g3 protein_coding protein_coding MGP_LPJ_T0068612.1 MGP_LPJ_G0028899.1 mouse_genomes_project 4 140786275 141009019 + MGP_LPJ_P0068612 Eif4g3 protein_coding protein_coding MGP_LPJ_T0068613.1 MGP_LPJ_G0028899.1 mouse_genomes_project 4 140797915 140902058 + MGP_LPJ_P0068613 Eif4g3 protein_coding protein_coding MGP_LPJ_T0068614.1 MGP_LPJ_G0028899.1 mouse_genomes_project 4 140951911 141011352 + MGP_LPJ_P0068614 Eif4g3 protein_coding protein_coding MGP_LPJ_T0068615.1 MGP_LPJ_G0028899.1 mouse_genomes_project 4 140980739 141011352 + Eif4g3 protein_coding processed_transcript MGP_LPJ_T0068616.1 MGP_LPJ_G0028899.1 mouse_genomes_project 4 140983370 140991268 + Eif4g3 protein_coding retained_intron MGP_LPJ_T0068617.1 MGP_LPJ_G0028899.1 mouse_genomes_project 4 140987300 140991048 + Eif4g3 protein_coding processed_transcript MGP_LPJ_T0068618.1 MGP_LPJ_G0028899.1 mouse_genomes_project 4 141004405 141006286 + Eif4g3 protein_coding processed_transcript MGP_LPJ_T0066668.1 MGP_LPJ_G0028469.1 mouse_genomes_project 4 109433935 109551321 + MGP_LPJ_P0066668 Zcchc11 protein_coding protein_coding MGP_LPJ_T0066669.1 MGP_LPJ_G0028469.1 mouse_genomes_project 4 109433935 109455768 + MGP_LPJ_P0066669 Zcchc11 protein_coding protein_coding MGP_LPJ_T0066670.1 MGP_LPJ_G0028469.1 mouse_genomes_project 4 109434519 109551327 + MGP_LPJ_P0066670 Zcchc11 protein_coding protein_coding MGP_LPJ_T0066671.1 MGP_LPJ_G0028469.1 mouse_genomes_project 4 109455695 109515479 + MGP_LPJ_P0066671 Zcchc11 protein_coding protein_coding MGP_LPJ_T0066672.1 MGP_LPJ_G0028469.1 mouse_genomes_project 4 109517616 109520464 + Zcchc11 protein_coding processed_transcript MGP_LPJ_T0066673.1 MGP_LPJ_G0028469.1 mouse_genomes_project 4 109533416 109540607 + Zcchc11 protein_coding processed_transcript MGP_LPJ_T0066674.1 MGP_LPJ_G0028469.1 mouse_genomes_project 4 109533515 109534383 + Zcchc11 protein_coding processed_transcript MGP_LPJ_T0066675.1 MGP_LPJ_G0028469.1 mouse_genomes_project 4 109533568 109534376 + Zcchc11 protein_coding processed_transcript MGP_LPJ_T0066676.1 MGP_LPJ_G0028469.1 mouse_genomes_project 4 109541405 109547339 + Zcchc11 protein_coding processed_transcript MGP_LPJ_T0066677.1 MGP_LPJ_G0028469.1 mouse_genomes_project 4 109547355 109551321 + Zcchc11 protein_coding processed_transcript MGP_LPJ_T0066678.1 MGP_LPJ_G0028469.1 mouse_genomes_project 4 109547639 109550959 + MGP_LPJ_P0066678 Zcchc11 protein_coding protein_coding MGP_LPJ_T0064890.1 MGP_LPJ_G0028063.1 mouse_genomes_project 4 38121553 38126950 - Ddx58 protein_coding processed_transcript MGP_LPJ_T0064891.1 MGP_LPJ_G0028063.1 mouse_genomes_project 4 38121557 38140395 - Ddx58 protein_coding processed_transcript MGP_LPJ_T0064892.1 MGP_LPJ_G0028063.1 mouse_genomes_project 4 38123289 38162508 - MGP_LPJ_P0064892 Ddx58 protein_coding protein_coding MGP_LPJ_T0064893.1 MGP_LPJ_G0028063.1 mouse_genomes_project 4 38126622 38127202 - Ddx58 protein_coding processed_transcript MGP_LPJ_T0064894.1 MGP_LPJ_G0028063.1 mouse_genomes_project 4 38127177 38133433 - Ddx58 protein_coding processed_transcript MGP_LPJ_T0064895.1 MGP_LPJ_G0028063.1 mouse_genomes_project 4 38127259 38162380 - MGP_LPJ_P0064895 Ddx58 protein_coding protein_coding MGP_LPJ_T0064896.1 MGP_LPJ_G0028063.1 mouse_genomes_project 4 38143225 38162435 - Ddx58 protein_coding processed_transcript MGP_LPJ_T0064897.1 MGP_LPJ_G0028063.1 mouse_genomes_project 4 38143670 38162402 - Ddx58 protein_coding processed_transcript MGP_LPJ_T0064898.1 MGP_LPJ_G0028063.1 mouse_genomes_project 4 38148190 38149920 - Ddx58 protein_coding processed_transcript MGP_LPJ_T0064899.1 MGP_LPJ_G0028063.1 mouse_genomes_project 4 38148622 38162505 - Ddx58 protein_coding processed_transcript MGP_LPJ_T0066665.1 MGP_LPJ_G0028467.1 mouse_genomes_project 4 109327769 109344554 - MGP_LPJ_P0066665 Fam159a protein_coding protein_coding MGP_LPJ_T0010659.1 MGP_LPJ_G0008777.1 mouse_genomes_project 4 139875348 139875424 + Gm25399 miRNA miRNA MGP_LPJ_T0014440.1 MGP_LPJ_G0012531.1 mouse_genomes_project 4 28880426 28880901 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010664.1 MGP_LPJ_G0008782.1 mouse_genomes_project 4 141132516 141132626 - Gm27646 miRNA miRNA MGP_LPJ_T0098606.1 MGP_LPJ_G0036880.1 mouse_genomes_project 4 145168705 145174372 - Gm13053 sense_intronic sense_intronic MGP_LPJ_T0004629.1 MGP_LPJ_G0004016.1 mouse_genomes_project 4 158095761 158098632 - BC039966 antisense antisense MGP_LPJ_T0067285.1 MGP_LPJ_G0028603.1 mouse_genomes_project 4 120492954 120534410 - AU022252 protein_coding processed_transcript MGP_LPJ_T0067287.1 MGP_LPJ_G0028603.1 mouse_genomes_project 4 120509213 120534414 - MGP_LPJ_P0067287 AU022252 protein_coding protein_coding MGP_LPJ_T0067288.1 MGP_LPJ_G0028603.1 mouse_genomes_project 4 120528091 120534380 - AU022252 protein_coding processed_transcript MGP_LPJ_T0067289.1 MGP_LPJ_G0028603.1 mouse_genomes_project 4 120528181 120534387 - AU022252 protein_coding processed_transcript MGP_LPJ_T0067548.1 MGP_LPJ_G0028673.1 mouse_genomes_project 4 126879266 126901630 + MGP_LPJ_P0067548 Gnl2 protein_coding protein_coding MGP_LPJ_T0067549.1 MGP_LPJ_G0028673.1 mouse_genomes_project 4 126893353 126920945 + MGP_LPJ_P0067549 Gnl2 protein_coding protein_coding MGP_LPJ_T0067550.1 MGP_LPJ_G0028673.1 mouse_genomes_project 4 126893419 126906823 + Gnl2 protein_coding processed_transcript MGP_LPJ_T0067551.1 MGP_LPJ_G0028673.1 mouse_genomes_project 4 126906536 126908499 + Gnl2 protein_coding processed_transcript MGP_LPJ_T0067552.1 MGP_LPJ_G0028673.1 mouse_genomes_project 4 126908810 126911843 + Gnl2 protein_coding processed_transcript MGP_LPJ_T0067553.1 MGP_LPJ_G0028673.1 mouse_genomes_project 4 126918719 126920949 + Gnl2 protein_coding processed_transcript MGP_LPJ_T0069474.1 MGP_LPJ_G0029102.1 mouse_genomes_project 4 159051875 159067059 + MGP_LPJ_P0069474 Ttc34 protein_coding unknown_likely_coding MGP_LPJ_T0069475.1 MGP_LPJ_G0029102.1 mouse_genomes_project 4 159057362 159068746 + MGP_LPJ_P0069475 Ttc34 protein_coding protein_coding MGP_LPJ_T0069476.1 MGP_LPJ_G0029102.1 mouse_genomes_project 4 159061830 159062909 + Ttc34 protein_coding processed_transcript MGP_LPJ_T0064928.1 MGP_LPJ_G0028071.1 mouse_genomes_project 4 38897318 38910009 + MGP_LPJ_P0064928 Spink4 protein_coding protein_coding MGP_LPJ_T0064929.1 MGP_LPJ_G0028071.1 mouse_genomes_project 4 38897320 38903678 + Spink4 protein_coding processed_transcript MGP_LPJ_T0067555.1 MGP_LPJ_G0028675.1 mouse_genomes_project 4 126935169 126942489 + MGP_LPJ_P0067555 Snip1 protein_coding protein_coding MGP_LPJ_T0067556.1 MGP_LPJ_G0028675.1 mouse_genomes_project 4 126935199 126939748 + Snip1 protein_coding processed_transcript MGP_LPJ_T0065712.1 MGP_LPJ_G0028247.1 mouse_genomes_project 4 58006868 58013457 + MGP_LPJ_P0065712 Gng10 protein_coding protein_coding MGP_LPJ_T0065713.1 MGP_LPJ_G0028247.1 mouse_genomes_project 4 58007552 58013457 + Gng10 protein_coding processed_transcript MGP_LPJ_T0064651.1 MGP_LPJ_G0028005.1 mouse_genomes_project 4 16636159 16660184 + MGP_LPJ_P0064651 Rmdn1 protein_coding protein_coding MGP_LPJ_T0064652.1 MGP_LPJ_G0028005.1 mouse_genomes_project 4 16636204 16668463 + MGP_LPJ_P0064652 Rmdn1 protein_coding protein_coding MGP_LPJ_T0064976.1 MGP_LPJ_G0028084.1 mouse_genomes_project 4 39519501 39526974 - MGP_LPJ_P0064976 AI464131 protein_coding protein_coding MGP_LPJ_T0064977.1 MGP_LPJ_G0028084.1 mouse_genomes_project 4 39523391 39526566 - MGP_LPJ_P0064977 AI464131 protein_coding protein_coding MGP_LPJ_T0066971.1 MGP_LPJ_G0028534.1 mouse_genomes_project 4 117236231 117241963 - MGP_LPJ_P0066971 Tspan1 protein_coding protein_coding MGP_LPJ_T0066972.1 MGP_LPJ_G0028534.1 mouse_genomes_project 4 117237670 117241964 - MGP_LPJ_P0066972 Tspan1 protein_coding protein_coding MGP_LPJ_T0066973.1 MGP_LPJ_G0028534.1 mouse_genomes_project 4 117237694 117239196 - Tspan1 protein_coding retained_intron MGP_LPJ_T0065249.1 MGP_LPJ_G0028130.1 mouse_genomes_project 4 41836010 41836835 - MGP_LPJ_P0065249 Spag8 protein_coding protein_coding MGP_LPJ_T0065250.1 MGP_LPJ_G0028130.1 mouse_genomes_project 4 41836010 41838228 - MGP_LPJ_P0065250 Spag8 protein_coding protein_coding MGP_LPJ_T0065251.1 MGP_LPJ_G0028130.1 mouse_genomes_project 4 41836351 41838270 - MGP_LPJ_P0065251 Spag8 protein_coding protein_coding MGP_LPJ_T0014525.1 MGP_LPJ_G0012616.1 mouse_genomes_project 4 56315871 56316357 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010679.1 MGP_LPJ_G0008797.1 mouse_genomes_project 4 160364388 160364458 - Mir200b miRNA miRNA MGP_LPJ_T0068946.1 MGP_LPJ_G0028992.1 mouse_genomes_project 4 147735803 147742362 + MGP_LPJ_P0068946 protein_coding protein_coding MGP_LPJ_T0001438.1 MGP_LPJ_G0001357.1 mouse_genomes_project 4 19565334 19568953 + TEC TEC MGP_LPJ_T0068312.1 MGP_LPJ_G0028830.1 mouse_genomes_project 4 136679276 136682391 + MGP_LPJ_P0068312 Gm30191 protein_coding protein_coding MGP_LPJ_T0007962.1 MGP_LPJ_G0006507.1 mouse_genomes_project 4 127113187 127126320 + 1700041M05Rik lincRNA lincRNA MGP_LPJ_T0100785.1 MGP_LPJ_G0039048.1 mouse_genomes_project 4 104281069 104281198 - Gm25877 snoRNA snoRNA MGP_LPJ_T0066070.1 MGP_LPJ_G0028329.1 mouse_genomes_project 4 86979951 86984037 - MGP_LPJ_P0066070 Rps6 protein_coding protein_coding MGP_LPJ_T0066071.1 MGP_LPJ_G0028329.1 mouse_genomes_project 4 86980095 86983970 - Rps6 protein_coding processed_transcript MGP_LPJ_T0066072.1 MGP_LPJ_G0028329.1 mouse_genomes_project 4 86981043 86983979 - Rps6 protein_coding processed_transcript MGP_LPJ_T0066073.1 MGP_LPJ_G0028329.1 mouse_genomes_project 4 86981153 86983957 - Rps6 protein_coding processed_transcript MGP_LPJ_T0014760.1 MGP_LPJ_G0012851.1 mouse_genomes_project 4 144428036 144428240 - processed_pseudogene processed_pseudogene MGP_LPJ_T0067776.1 MGP_LPJ_G0028727.1 mouse_genomes_project 4 131319179 131364112 - MGP_LPJ_P0067776 S100pbp protein_coding unknown_likely_coding MGP_LPJ_T0067777.1 MGP_LPJ_G0028727.1 mouse_genomes_project 4 131319187 131364569 - MGP_LPJ_P0067777 S100pbp protein_coding protein_coding MGP_LPJ_T0067778.1 MGP_LPJ_G0028727.1 mouse_genomes_project 4 131319187 131364717 - MGP_LPJ_P0067778 S100pbp protein_coding protein_coding MGP_LPJ_T0067779.1 MGP_LPJ_G0028727.1 mouse_genomes_project 4 131321733 131364567 - S100pbp protein_coding processed_transcript MGP_LPJ_T0067780.1 MGP_LPJ_G0028727.1 mouse_genomes_project 4 131322012 131364567 - S100pbp protein_coding retained_intron MGP_LPJ_T0067781.1 MGP_LPJ_G0028727.1 mouse_genomes_project 4 131322012 131355433 - S100pbp protein_coding retained_intron MGP_LPJ_T0067782.1 MGP_LPJ_G0028727.1 mouse_genomes_project 4 131322218 131364502 - MGP_LPJ_P0067782 S100pbp protein_coding protein_coding MGP_LPJ_T0067783.1 MGP_LPJ_G0028727.1 mouse_genomes_project 4 131322218 131364599 - MGP_LPJ_P0067783 S100pbp protein_coding protein_coding MGP_LPJ_T0067784.1 MGP_LPJ_G0028727.1 mouse_genomes_project 4 131335691 131364607 - S100pbp protein_coding processed_transcript MGP_LPJ_T0067785.1 MGP_LPJ_G0028727.1 mouse_genomes_project 4 131340895 131352451 - S100pbp protein_coding processed_transcript MGP_LPJ_T0067786.1 MGP_LPJ_G0028727.1 mouse_genomes_project 4 131351310 131364616 - MGP_LPJ_P0067786 S100pbp protein_coding protein_coding MGP_LPJ_T0067787.1 MGP_LPJ_G0028727.1 mouse_genomes_project 4 131356752 131364660 - S100pbp protein_coding processed_transcript MGP_LPJ_T0067788.1 MGP_LPJ_G0028727.1 mouse_genomes_project 4 131356810 131364488 - S100pbp protein_coding processed_transcript MGP_LPJ_T0014581.1 MGP_LPJ_G0012672.1 mouse_genomes_project 4 83051842 83052043 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102140.1 MGP_LPJ_G0040177.1 mouse_genomes_project 4 88875965 88876532 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0014548.1 MGP_LPJ_G0012639.1 mouse_genomes_project 4 70815047 70815484 + processed_pseudogene processed_pseudogene MGP_LPJ_T0064962.1 MGP_LPJ_G0028080.1 mouse_genomes_project 4 39293123 39319597 - MGP_LPJ_P0064962 Dcaf12 protein_coding protein_coding MGP_LPJ_T0066225.1 MGP_LPJ_G0028379.1 mouse_genomes_project 4 97054392 97081644 - MGP_LPJ_P0066225 Cyp2j5 protein_coding protein_coding MGP_LPJ_T0066109.1 MGP_LPJ_G0028338.1 mouse_genomes_project 4 88821162 88821735 - MGP_LPJ_P0066109 Ifna9 protein_coding protein_coding MGP_LPJ_T0065590.1 MGP_LPJ_G0028215.1 mouse_genomes_project 4 52381498 52457850 + MGP_LPJ_P0065590 Fsd1l protein_coding protein_coding MGP_LPJ_T0065591.1 MGP_LPJ_G0028215.1 mouse_genomes_project 4 52381517 52402978 + Fsd1l protein_coding retained_intron MGP_LPJ_T0065592.1 MGP_LPJ_G0028215.1 mouse_genomes_project 4 52381518 52397927 + Fsd1l protein_coding retained_intron MGP_LPJ_T0065593.1 MGP_LPJ_G0028215.1 mouse_genomes_project 4 52381596 52451994 + MGP_LPJ_P0065593 Fsd1l protein_coding protein_coding MGP_LPJ_T0065594.1 MGP_LPJ_G0028215.1 mouse_genomes_project 4 52381601 52451992 + MGP_LPJ_P0065594 Fsd1l protein_coding protein_coding MGP_LPJ_T0065595.1 MGP_LPJ_G0028215.1 mouse_genomes_project 4 52381625 52452004 + MGP_LPJ_P0065595 Fsd1l protein_coding unknown_likely_coding MGP_LPJ_T0065596.1 MGP_LPJ_G0028215.1 mouse_genomes_project 4 52381743 52412423 + MGP_LPJ_P0065596 Fsd1l protein_coding nonsense_mediated_decay MGP_LPJ_T0065597.1 MGP_LPJ_G0028215.1 mouse_genomes_project 4 52393307 52457850 + MGP_LPJ_P0065597 Fsd1l protein_coding protein_coding MGP_LPJ_T0102131.1 MGP_LPJ_G0040168.1 mouse_genomes_project 4 41963172 41963474 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0067618.1 MGP_LPJ_G0028689.1 mouse_genomes_project 4 128246752 128275509 + MGP_LPJ_P0067618 Col8a2 protein_coding protein_coding MGP_LPJ_T0067619.1 MGP_LPJ_G0028689.1 mouse_genomes_project 4 128261660 128270963 + MGP_LPJ_P0067619 Col8a2 protein_coding protein_coding MGP_LPJ_T0102145.1 MGP_LPJ_G0040182.1 mouse_genomes_project 4 96603577 96603750 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0102160.1 MGP_LPJ_G0040197.1 mouse_genomes_project 4 122894027 122896673 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0068384.1 MGP_LPJ_G0028849.1 mouse_genomes_project 4 137637554 137700064 + MGP_LPJ_P0068384 Runx3 protein_coding protein_coding MGP_LPJ_T0068385.1 MGP_LPJ_G0028849.1 mouse_genomes_project 4 137672091 137698275 + MGP_LPJ_P0068385 Runx3 protein_coding protein_coding MGP_LPJ_T0068386.1 MGP_LPJ_G0028849.1 mouse_genomes_project 4 137672516 137675174 + Runx3 protein_coding retained_intron MGP_LPJ_T0068387.1 MGP_LPJ_G0028849.1 mouse_genomes_project 4 137672738 137674936 + Runx3 protein_coding processed_transcript MGP_LPJ_T0068388.1 MGP_LPJ_G0028849.1 mouse_genomes_project 4 137673083 137674991 + Runx3 protein_coding processed_transcript MGP_LPJ_T0068389.1 MGP_LPJ_G0028849.1 mouse_genomes_project 4 137674000 137674907 + Runx3 protein_coding processed_transcript MGP_LPJ_T0010591.1 MGP_LPJ_G0008709.1 mouse_genomes_project 4 7858466 7858552 + Mir684-2 miRNA miRNA MGP_LPJ_T0014622.1 MGP_LPJ_G0012713.1 mouse_genomes_project 4 98698772 98699290 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100758.1 MGP_LPJ_G0039021.1 mouse_genomes_project 4 52765399 52765530 + Gm24177 snoRNA snoRNA MGP_LPJ_T0064761.1 MGP_LPJ_G0028032.1 mouse_genomes_project 4 29775362 30138803 + MGP_LPJ_P0064761 Bach2 protein_coding protein_coding MGP_LPJ_T0064762.1 MGP_LPJ_G0028032.1 mouse_genomes_project 4 29775508 30133898 + MGP_LPJ_P0064762 Bach2 protein_coding protein_coding MGP_LPJ_T0064763.1 MGP_LPJ_G0028032.1 mouse_genomes_project 4 29775635 30047904 + Bach2 protein_coding processed_transcript MGP_LPJ_T0064764.1 MGP_LPJ_G0028032.1 mouse_genomes_project 4 29785634 29857267 + Bach2 protein_coding processed_transcript MGP_LPJ_T0064765.1 MGP_LPJ_G0028032.1 mouse_genomes_project 4 29960415 30138807 + MGP_LPJ_P0064765 Bach2 protein_coding protein_coding MGP_LPJ_T0064766.1 MGP_LPJ_G0028032.1 mouse_genomes_project 4 30047772 30048894 + Bach2 protein_coding processed_transcript MGP_LPJ_T0064767.1 MGP_LPJ_G0028032.1 mouse_genomes_project 4 30127629 30132537 + Bach2 protein_coding processed_transcript MGP_LPJ_T0068327.1 MGP_LPJ_G0028835.1 mouse_genomes_project 4 136798405 136814648 - MGP_LPJ_P0068327 Extl1 protein_coding protein_coding MGP_LPJ_T0068328.1 MGP_LPJ_G0028835.1 mouse_genomes_project 4 136802634 136825235 - Extl1 protein_coding processed_transcript MGP_LPJ_T0068329.1 MGP_LPJ_G0028835.1 mouse_genomes_project 4 136804801 136807516 - Extl1 protein_coding processed_transcript MGP_LPJ_T0069180.1 MGP_LPJ_G0029049.1 mouse_genomes_project 4 153559930 153592097 - MGP_LPJ_P0069180 Slc25a33 protein_coding protein_coding MGP_LPJ_T0066798.1 MGP_LPJ_G0028492.1 mouse_genomes_project 4 112540474 112588496 + MGP_LPJ_P0066798 Bend5 protein_coding protein_coding MGP_LPJ_T0066799.1 MGP_LPJ_G0028492.1 mouse_genomes_project 4 112540515 112560139 + Bend5 protein_coding processed_transcript MGP_LPJ_T0066800.1 MGP_LPJ_G0028492.1 mouse_genomes_project 4 112540556 112588118 + Bend5 protein_coding processed_transcript MGP_LPJ_T0066801.1 MGP_LPJ_G0028492.1 mouse_genomes_project 4 112540675 112546011 + Bend5 protein_coding processed_transcript MGP_LPJ_T0066802.1 MGP_LPJ_G0028492.1 mouse_genomes_project 4 112560089 112588494 + MGP_LPJ_P0066802 Bend5 protein_coding protein_coding MGP_LPJ_T0066803.1 MGP_LPJ_G0028492.1 mouse_genomes_project 4 112560211 112588125 + Bend5 protein_coding processed_transcript MGP_LPJ_T0068650.1 MGP_LPJ_G0028909.1 mouse_genomes_project 4 141411343 141486419 - MGP_LPJ_P0068650 Vwa5b1 protein_coding protein_coding MGP_LPJ_T0068651.1 MGP_LPJ_G0028909.1 mouse_genomes_project 4 141413322 141425551 - MGP_LPJ_P0068651 Vwa5b1 protein_coding protein_coding MGP_LPJ_T0068652.1 MGP_LPJ_G0028909.1 mouse_genomes_project 4 141426097 141486570 - MGP_LPJ_P0068652 Vwa5b1 protein_coding nonsense_mediated_decay MGP_LPJ_T0068653.1 MGP_LPJ_G0028909.1 mouse_genomes_project 4 141440831 141452904 - Vwa5b1 protein_coding processed_transcript MGP_LPJ_T0068654.1 MGP_LPJ_G0028909.1 mouse_genomes_project 4 141446517 141453373 - Vwa5b1 protein_coding processed_transcript MGP_LPJ_T0008028.1 MGP_LPJ_G0006551.1 mouse_genomes_project 4 143677943 143682702 + Gm13025 lincRNA lincRNA MGP_LPJ_T0008025.1 MGP_LPJ_G0006548.1 mouse_genomes_project 4 143360655 143366112 + Gm13017 lincRNA lincRNA MGP_LPJ_T0010600.1 MGP_LPJ_G0008718.1 mouse_genomes_project 4 28190089 28190198 - Gm22831 miRNA miRNA MGP_LPJ_T0014511.1 MGP_LPJ_G0012602.1 mouse_genomes_project 4 52548863 52549250 - processed_pseudogene processed_pseudogene MGP_LPJ_T0067142.1 MGP_LPJ_G0028567.1 mouse_genomes_project 4 118937791 118949182 - MGP_LPJ_P0067142 Klf17 protein_coding protein_coding MGP_LPJ_T0068373.1 MGP_LPJ_G0028847.1 mouse_genomes_project 4 137422427 137426508 + Rsrp1 protein_coding retained_intron MGP_LPJ_T0068374.1 MGP_LPJ_G0028847.1 mouse_genomes_project 4 137422427 137426508 + MGP_LPJ_P0068374 Rsrp1 protein_coding protein_coding MGP_LPJ_T0068375.1 MGP_LPJ_G0028847.1 mouse_genomes_project 4 137422428 137424259 + Rsrp1 protein_coding processed_transcript MGP_LPJ_T0068376.1 MGP_LPJ_G0028847.1 mouse_genomes_project 4 137422461 137424169 + Rsrp1 protein_coding processed_transcript MGP_LPJ_T0068377.1 MGP_LPJ_G0028847.1 mouse_genomes_project 4 137422480 137426209 + Rsrp1 protein_coding processed_transcript MGP_LPJ_T0068378.1 MGP_LPJ_G0028847.1 mouse_genomes_project 4 137423295 137426209 + Rsrp1 protein_coding processed_transcript MGP_LPJ_T0068379.1 MGP_LPJ_G0028847.1 mouse_genomes_project 4 137423545 137424191 + Rsrp1 protein_coding processed_transcript MGP_LPJ_T0068380.1 MGP_LPJ_G0028847.1 mouse_genomes_project 4 137424281 137425790 + Rsrp1 protein_coding processed_transcript MGP_LPJ_T0066132.1 MGP_LPJ_G0028355.1 mouse_genomes_project 4 89540601 89545370 - MGP_LPJ_P0066132 Cdkn2b protein_coding protein_coding MGP_LPJ_T0014604.1 MGP_LPJ_G0012695.1 mouse_genomes_project 4 91138663 91139158 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014367.1 MGP_LPJ_G0012458.1 mouse_genomes_project 4 8142878 8143857 + processed_pseudogene processed_pseudogene MGP_LPJ_T0066449.1 MGP_LPJ_G0028427.1 mouse_genomes_project 4 105635871 105740599 + MGP_LPJ_P0066449 1700024P16Rik protein_coding protein_coding MGP_LPJ_T0066450.1 MGP_LPJ_G0028427.1 mouse_genomes_project 4 105635939 105740599 + MGP_LPJ_P0066450 1700024P16Rik protein_coding protein_coding MGP_LPJ_T0067493.1 MGP_LPJ_G0028656.1 mouse_genomes_project 4 125553466 125590182 + Rhbdl2 protein_coding processed_transcript MGP_LPJ_T0067494.1 MGP_LPJ_G0028656.1 mouse_genomes_project 4 125553467 125615634 + MGP_LPJ_P0067494 Rhbdl2 protein_coding protein_coding MGP_LPJ_T0067495.1 MGP_LPJ_G0028656.1 mouse_genomes_project 4 125564857 125588825 + Rhbdl2 protein_coding processed_transcript MGP_LPJ_T0067496.1 MGP_LPJ_G0028656.1 mouse_genomes_project 4 125588597 125615634 + MGP_LPJ_P0067496 Rhbdl2 protein_coding protein_coding MGP_LPJ_T0067497.1 MGP_LPJ_G0028656.1 mouse_genomes_project 4 125592018 125594989 + Rhbdl2 protein_coding processed_transcript MGP_LPJ_T0014417.1 MGP_LPJ_G0012508.1 mouse_genomes_project 4 22642995 22643322 + processed_pseudogene processed_pseudogene MGP_LPJ_T0068233.1 MGP_LPJ_G0028817.1 mouse_genomes_project 4 136370883 136374037 - MGP_LPJ_P0068233 protein_coding protein_coding MGP_LPJ_T0068234.1 MGP_LPJ_G0028817.1 mouse_genomes_project 4 136370915 136373283 - protein_coding retained_intron MGP_LPJ_T0068235.1 MGP_LPJ_G0028817.1 mouse_genomes_project 4 136370915 136372653 - protein_coding processed_transcript MGP_LPJ_T0068236.1 MGP_LPJ_G0028817.1 mouse_genomes_project 4 136370915 136372629 - protein_coding processed_transcript MGP_LPJ_T0068237.1 MGP_LPJ_G0028817.1 mouse_genomes_project 4 136370915 136374037 - protein_coding processed_transcript MGP_LPJ_T0068238.1 MGP_LPJ_G0028817.1 mouse_genomes_project 4 136370969 136373265 - protein_coding retained_intron MGP_LPJ_T0068239.1 MGP_LPJ_G0028817.1 mouse_genomes_project 4 136370979 136373235 - protein_coding retained_intron MGP_LPJ_T0100815.1 MGP_LPJ_G0039078.1 mouse_genomes_project 4 146432616 146432748 + Gm22039 snoRNA snoRNA MGP_LPJ_T0099542.1 MGP_LPJ_G0037805.1 mouse_genomes_project 4 152227456 152227560 + Gm24002 snRNA snRNA MGP_LPJ_T0014491.1 MGP_LPJ_G0012582.1 mouse_genomes_project 4 47165659 47166024 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004552.1 MGP_LPJ_G0003956.1 mouse_genomes_project 4 125619370 125647940 - 1700121C08Rik antisense antisense MGP_LPJ_T0069072.1 MGP_LPJ_G0029031.1 mouse_genomes_project 4 152297223 152299087 + MGP_LPJ_P0069072 Masp2 protein_coding protein_coding MGP_LPJ_T0069073.1 MGP_LPJ_G0029031.1 mouse_genomes_project 4 152297233 152310156 + MGP_LPJ_P0069073 Masp2 protein_coding protein_coding MGP_LPJ_T0069074.1 MGP_LPJ_G0029031.1 mouse_genomes_project 4 152297237 152304869 + Masp2 protein_coding retained_intron MGP_LPJ_T0069075.1 MGP_LPJ_G0029031.1 mouse_genomes_project 4 152297244 152299087 + Masp2 protein_coding retained_intron MGP_LPJ_T0064841.1 MGP_LPJ_G0028051.1 mouse_genomes_project 4 32338222 32363090 - MGP_LPJ_P0064841 Slc35a1 protein_coding protein_coding MGP_LPJ_T0064842.1 MGP_LPJ_G0028051.1 mouse_genomes_project 4 32338858 32359114 - Slc35a1 protein_coding processed_transcript MGP_LPJ_T0064843.1 MGP_LPJ_G0028051.1 mouse_genomes_project 4 32344463 32359021 - MGP_LPJ_P0064843 Slc35a1 protein_coding protein_coding MGP_LPJ_T0064844.1 MGP_LPJ_G0028051.1 mouse_genomes_project 4 32350506 32362907 - Slc35a1 protein_coding processed_transcript MGP_LPJ_T0064845.1 MGP_LPJ_G0028051.1 mouse_genomes_project 4 32358992 32363048 - Slc35a1 protein_coding processed_transcript MGP_LPJ_T0066660.1 MGP_LPJ_G0028466.1 mouse_genomes_project 4 109286128 109299575 + MGP_LPJ_P0066660 Coa7 protein_coding protein_coding MGP_LPJ_T0066661.1 MGP_LPJ_G0028466.1 mouse_genomes_project 4 109286141 109296482 + Coa7 protein_coding processed_transcript MGP_LPJ_T0066662.1 MGP_LPJ_G0028466.1 mouse_genomes_project 4 109286144 109296714 + Coa7 protein_coding processed_transcript MGP_LPJ_T0066663.1 MGP_LPJ_G0028466.1 mouse_genomes_project 4 109286166 109296209 + Coa7 protein_coding processed_transcript MGP_LPJ_T0066664.1 MGP_LPJ_G0028466.1 mouse_genomes_project 4 109286177 109290647 + Coa7 protein_coding processed_transcript MGP_LPJ_T0102144.1 MGP_LPJ_G0040181.1 mouse_genomes_project 4 96581193 96581372 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0068467.1 MGP_LPJ_G0028866.1 mouse_genomes_project 4 138561578 138565983 - MGP_LPJ_P0068467 Lypla2 protein_coding protein_coding MGP_LPJ_T0068468.1 MGP_LPJ_G0028866.1 mouse_genomes_project 4 138561578 138565285 - MGP_LPJ_P0068468 Lypla2 protein_coding protein_coding MGP_LPJ_T0068469.1 MGP_LPJ_G0028866.1 mouse_genomes_project 4 138562055 138563822 - Lypla2 protein_coding retained_intron MGP_LPJ_T0068470.1 MGP_LPJ_G0028866.1 mouse_genomes_project 4 138562118 138565945 - Lypla2 protein_coding retained_intron MGP_LPJ_T0068471.1 MGP_LPJ_G0028866.1 mouse_genomes_project 4 138564001 138565960 - Lypla2 protein_coding retained_intron MGP_LPJ_T0004634.1 MGP_LPJ_G0004020.1 mouse_genomes_project 4 158840556 158847701 + Gm13111 antisense antisense MGP_LPJ_T0007943.1 MGP_LPJ_G0006492.1 mouse_genomes_project 4 115625625 115626269 - Gm28864 lincRNA lincRNA MGP_LPJ_T0004519.1 MGP_LPJ_G0003932.1 mouse_genomes_project 4 108229246 108232815 - Gm12869 antisense antisense MGP_LPJ_T0004620.1 MGP_LPJ_G0004008.1 mouse_genomes_project 4 153246860 153251722 + antisense antisense MGP_LPJ_T0014451.1 MGP_LPJ_G0012542.1 mouse_genomes_project 4 32058247 32059058 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004540.1 MGP_LPJ_G0003946.1 mouse_genomes_project 4 119075008 119077383 + Gm12841 antisense antisense MGP_LPJ_T0065519.1 MGP_LPJ_G0028190.1 mouse_genomes_project 4 47024486 47048955 + MGP_LPJ_P0065519 Msantd3 protein_coding protein_coding MGP_LPJ_T0065520.1 MGP_LPJ_G0028190.1 mouse_genomes_project 4 47024630 47048614 + MGP_LPJ_P0065520 Msantd3 protein_coding protein_coding MGP_LPJ_T0065521.1 MGP_LPJ_G0028190.1 mouse_genomes_project 4 47046982 47048955 + Msantd3 protein_coding processed_transcript MGP_LPJ_T0064794.1 MGP_LPJ_G0028038.1 mouse_genomes_project 4 30562411 30604185 + MGP_LPJ_P0064794 Rragd protein_coding protein_coding MGP_LPJ_T0064795.1 MGP_LPJ_G0028038.1 mouse_genomes_project 4 30562717 30600804 + MGP_LPJ_P0064795 Rragd protein_coding protein_coding MGP_LPJ_T0064796.1 MGP_LPJ_G0028038.1 mouse_genomes_project 4 30584862 30600824 + Rragd protein_coding processed_transcript MGP_LPJ_T0098032.1 MGP_LPJ_G0036313.1 mouse_genomes_project 4 3012362 3015237 - pseudogene pseudogene MGP_LPJ_T0067635.1 MGP_LPJ_G0028693.1 mouse_genomes_project 4 128402835 128436290 - MGP_LPJ_P0067635 Ago1 protein_coding protein_coding MGP_LPJ_T0067636.1 MGP_LPJ_G0028693.1 mouse_genomes_project 4 128406144 128429503 - MGP_LPJ_P0067636 Ago1 protein_coding nonsense_mediated_decay MGP_LPJ_T0067637.1 MGP_LPJ_G0028693.1 mouse_genomes_project 4 128407326 128426928 - MGP_LPJ_P0067637 Ago1 protein_coding protein_coding MGP_LPJ_T0067638.1 MGP_LPJ_G0028693.1 mouse_genomes_project 4 128410423 128411185 - Ago1 protein_coding retained_intron MGP_LPJ_T0067639.1 MGP_LPJ_G0028693.1 mouse_genomes_project 4 128427035 128427846 - Ago1 protein_coding retained_intron MGP_LPJ_T0014769.1 MGP_LPJ_G0012860.1 mouse_genomes_project 4 147704905 147706266 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007873.1 MGP_LPJ_G0006437.1 mouse_genomes_project 4 56258165 56262442 - 1700042G15Rik lincRNA lincRNA MGP_LPJ_T0007874.1 MGP_LPJ_G0006437.1 mouse_genomes_project 4 56258489 56262461 - 1700042G15Rik lincRNA lincRNA MGP_LPJ_T0007875.1 MGP_LPJ_G0006437.1 mouse_genomes_project 4 56258591 56262421 - 1700042G15Rik lincRNA lincRNA MGP_LPJ_T0068640.1 MGP_LPJ_G0028903.1 mouse_genomes_project 4 141108803 141118164 + MGP_LPJ_P0068640 Ddost protein_coding protein_coding MGP_LPJ_T0014496.1 MGP_LPJ_G0012587.1 mouse_genomes_project 4 47867578 47995942 + processed_pseudogene processed_pseudogene MGP_LPJ_T0067265.1 MGP_LPJ_G0028599.1 mouse_genomes_project 4 120395930 120425146 + MGP_LPJ_P0067265 Slc2a1 protein_coding protein_coding MGP_LPJ_T0067266.1 MGP_LPJ_G0028599.1 mouse_genomes_project 4 120396023 120419766 + MGP_LPJ_P0067266 Slc2a1 protein_coding protein_coding MGP_LPJ_T0067267.1 MGP_LPJ_G0028599.1 mouse_genomes_project 4 120396078 120419738 + MGP_LPJ_P0067267 Slc2a1 protein_coding protein_coding MGP_LPJ_T0067268.1 MGP_LPJ_G0028599.1 mouse_genomes_project 4 120396133 120424491 + MGP_LPJ_P0067268 Slc2a1 protein_coding nonsense_mediated_decay MGP_LPJ_T0068313.1 MGP_LPJ_G0028831.1 mouse_genomes_project 4 136683458 136686452 - MGP_LPJ_P0068313 Grrp1 protein_coding protein_coding MGP_LPJ_T0068314.1 MGP_LPJ_G0028831.1 mouse_genomes_project 4 136684054 136685368 - Grrp1 protein_coding processed_transcript MGP_LPJ_T0066744.1 MGP_LPJ_G0028482.1 mouse_genomes_project 4 110233606 110271768 + MGP_LPJ_P0066744 Calr4 protein_coding protein_coding MGP_LPJ_T0066745.1 MGP_LPJ_G0028482.1 mouse_genomes_project 4 110249795 110272018 + MGP_LPJ_P0066745 Calr4 protein_coding protein_coding MGP_LPJ_T0066746.1 MGP_LPJ_G0028482.1 mouse_genomes_project 4 110250942 110272018 + MGP_LPJ_P0066746 Calr4 protein_coding protein_coding MGP_LPJ_T0066747.1 MGP_LPJ_G0028482.1 mouse_genomes_project 4 110259894 110271590 + Calr4 protein_coding processed_transcript MGP_LPJ_T0068143.1 MGP_LPJ_G0028796.1 mouse_genomes_project 4 135318014 135329373 + Fgr protein_coding processed_transcript MGP_LPJ_T0068144.1 MGP_LPJ_G0028796.1 mouse_genomes_project 4 135318021 135346506 + MGP_LPJ_P0068144 Fgr protein_coding protein_coding MGP_LPJ_T0068145.1 MGP_LPJ_G0028796.1 mouse_genomes_project 4 135321035 135345348 + Fgr protein_coding processed_transcript MGP_LPJ_T0064732.1 MGP_LPJ_G0028025.1 mouse_genomes_project 4 22217804 22258556 + Gpr63 protein_coding processed_transcript MGP_LPJ_T0064733.1 MGP_LPJ_G0028025.1 mouse_genomes_project 4 22224804 22260490 + MGP_LPJ_P0064733 Gpr63 protein_coding protein_coding MGP_LPJ_T0011580.1 MGP_LPJ_G0009698.1 mouse_genomes_project 4 50205515 50205784 + Gm22563 misc_RNA misc_RNA MGP_LPJ_T0014452.1 MGP_LPJ_G0012543.1 mouse_genomes_project 4 32067736 32068190 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014738.1 MGP_LPJ_G0012829.1 mouse_genomes_project 4 135648568 135649023 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007849.1 MGP_LPJ_G0006418.1 mouse_genomes_project 4 43207603 43212137 + Gm12678 lincRNA lincRNA MGP_LPJ_T0064702.1 MGP_LPJ_G0028019.1 mouse_genomes_project 4 19038615 19108034 + Faxc protein_coding processed_transcript MGP_LPJ_T0064703.1 MGP_LPJ_G0028019.1 mouse_genomes_project 4 19038617 19108639 + MGP_LPJ_P0064703 Faxc protein_coding protein_coding MGP_LPJ_T0064704.1 MGP_LPJ_G0028019.1 mouse_genomes_project 4 19038619 19061702 + Faxc protein_coding processed_transcript MGP_LPJ_T0064705.1 MGP_LPJ_G0028019.1 mouse_genomes_project 4 19038643 19110727 + Faxc protein_coding processed_transcript MGP_LPJ_T0064706.1 MGP_LPJ_G0028019.1 mouse_genomes_project 4 19069285 19071637 + Faxc protein_coding processed_transcript MGP_LPJ_T0010652.1 MGP_LPJ_G0008770.1 mouse_genomes_project 4 135938346 135938644 - miRNA miRNA MGP_LPJ_T0068125.1 MGP_LPJ_G0028790.1 mouse_genomes_project 4 135065587 135090386 - MGP_LPJ_P0068125 Smpdl3b protein_coding protein_coding MGP_LPJ_T0100743.1 MGP_LPJ_G0039006.1 mouse_genomes_project 4 31662829 31662916 + Gm22010 snoRNA snoRNA MGP_LPJ_T0068936.1 MGP_LPJ_G0028982.1 mouse_genomes_project 4 146767622 146770515 + MGP_LPJ_P0068936 protein_coding protein_coding MGP_LPJ_T0064526.1 MGP_LPJ_G0027971.1 mouse_genomes_project 4 7703768 7723908 - MGP_LPJ_P0064526 Plekhf2 protein_coding protein_coding MGP_LPJ_T0064527.1 MGP_LPJ_G0027971.1 mouse_genomes_project 4 7705850 7724159 - MGP_LPJ_P0064527 Plekhf2 protein_coding protein_coding MGP_LPJ_T0004555.1 MGP_LPJ_G0003958.1 mouse_genomes_project 4 126361646 126498414 - Gm27247 antisense antisense MGP_LPJ_T0100740.1 MGP_LPJ_G0039003.1 mouse_genomes_project 4 22749774 22749899 - Gm25975 snoRNA snoRNA MGP_LPJ_T0008006.1 MGP_LPJ_G0006533.1 mouse_genomes_project 4 135443977 135447157 + Gm26615 lincRNA lincRNA MGP_LPJ_T0008040.1 MGP_LPJ_G0006563.1 mouse_genomes_project 4 153970744 153976054 - Gm13093 lincRNA lincRNA MGP_LPJ_T0018050.1 MGP_LPJ_G0015495.1 mouse_genomes_project 4 134649728 134655503 - Snhg3 processed_transcript processed_transcript MGP_LPJ_T0018051.1 MGP_LPJ_G0015495.1 mouse_genomes_project 4 134653639 134655526 - Snhg3 processed_transcript processed_transcript MGP_LPJ_T0018052.1 MGP_LPJ_G0015495.1 mouse_genomes_project 4 134653640 134654773 - Snhg3 processed_transcript processed_transcript MGP_LPJ_T0018053.1 MGP_LPJ_G0015495.1 mouse_genomes_project 4 134653640 134655473 - Snhg3 processed_transcript processed_transcript MGP_LPJ_T0018054.1 MGP_LPJ_G0015495.1 mouse_genomes_project 4 134653710 134655176 - Snhg3 processed_transcript processed_transcript MGP_LPJ_T0068872.1 MGP_LPJ_G0028962.1 mouse_genomes_project 4 144717209 144722388 - MGP_LPJ_P0068872 Tmem82 protein_coding nonsense_mediated_decay MGP_LPJ_T0068873.1 MGP_LPJ_G0028962.1 mouse_genomes_project 4 144718069 144722024 - MGP_LPJ_P0068873 Tmem82 protein_coding protein_coding MGP_LPJ_T0068874.1 MGP_LPJ_G0028962.1 mouse_genomes_project 4 144718073 144721767 - Tmem82 protein_coding retained_intron MGP_LPJ_T0004588.1 MGP_LPJ_G0003985.1 mouse_genomes_project 4 143082948 143084419 + Gm13027 antisense antisense MGP_LPJ_T0066995.1 MGP_LPJ_G0028539.1 mouse_genomes_project 4 117658373 117662670 - MGP_LPJ_P0066995 Tmem69 protein_coding protein_coding MGP_LPJ_T0066996.1 MGP_LPJ_G0028539.1 mouse_genomes_project 4 117658645 117659849 - Tmem69 protein_coding processed_transcript MGP_LPJ_T0066997.1 MGP_LPJ_G0028539.1 mouse_genomes_project 4 117659688 117662669 - MGP_LPJ_P0066997 Tmem69 protein_coding protein_coding MGP_LPJ_T0064926.1 MGP_LPJ_G0028070.1 mouse_genomes_project 4 38774602 38826730 - MGP_LPJ_P0064926 B4galt1 protein_coding protein_coding MGP_LPJ_T0064927.1 MGP_LPJ_G0028070.1 mouse_genomes_project 4 38779157 38826730 - MGP_LPJ_P0064927 B4galt1 protein_coding protein_coding MGP_LPJ_T0102143.1 MGP_LPJ_G0040180.1 mouse_genomes_project 4 96570854 96571060 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0068666.1 MGP_LPJ_G0028914.1 mouse_genomes_project 4 141666030 141737891 - MGP_LPJ_P0068666 Pla2g5 protein_coding protein_coding MGP_LPJ_T0068667.1 MGP_LPJ_G0028914.1 mouse_genomes_project 4 141666030 141690241 - MGP_LPJ_P0068667 Pla2g5 protein_coding protein_coding MGP_LPJ_T0068668.1 MGP_LPJ_G0028914.1 mouse_genomes_project 4 141666035 141737878 - MGP_LPJ_P0068668 Pla2g5 protein_coding protein_coding MGP_LPJ_T0068669.1 MGP_LPJ_G0028914.1 mouse_genomes_project 4 141667143 141683151 - MGP_LPJ_P0068669 Pla2g5 protein_coding protein_coding MGP_LPJ_T0068670.1 MGP_LPJ_G0028914.1 mouse_genomes_project 4 141667358 141683197 - Pla2g5 protein_coding processed_transcript MGP_LPJ_T0068671.1 MGP_LPJ_G0028914.1 mouse_genomes_project 4 141671353 141690243 - Pla2g5 protein_coding processed_transcript MGP_LPJ_T0068672.1 MGP_LPJ_G0028914.1 mouse_genomes_project 4 141671367 141690214 - Pla2g5 protein_coding processed_transcript MGP_LPJ_T0068673.1 MGP_LPJ_G0028914.1 mouse_genomes_project 4 141672973 141678910 - Pla2g5 protein_coding processed_transcript MGP_LPJ_T0068674.1 MGP_LPJ_G0028914.1 mouse_genomes_project 4 141732082 141737858 - Pla2g5 protein_coding processed_transcript MGP_LPJ_T0069514.1 MGP_LPJ_G0029109.1 mouse_genomes_project 4 159281757 159287175 + MGP_LPJ_P0069514 Pex10 protein_coding protein_coding MGP_LPJ_T0069515.1 MGP_LPJ_G0029109.1 mouse_genomes_project 4 159281795 159283623 + Pex10 protein_coding processed_transcript MGP_LPJ_T0069516.1 MGP_LPJ_G0029109.1 mouse_genomes_project 4 159281798 159286923 + Pex10 protein_coding processed_transcript MGP_LPJ_T0069517.1 MGP_LPJ_G0029109.1 mouse_genomes_project 4 159281800 159282765 + Pex10 protein_coding processed_transcript MGP_LPJ_T0069518.1 MGP_LPJ_G0029109.1 mouse_genomes_project 4 159281800 159283858 + Pex10 protein_coding processed_transcript MGP_LPJ_T0066126.1 MGP_LPJ_G0028351.1 mouse_genomes_project 4 89067205 89067703 - MGP_LPJ_P0066126 4930553M12Rik protein_coding protein_coding MGP_LPJ_T0066849.1 MGP_LPJ_G0028501.1 mouse_genomes_project 4 114747813 114804809 - protein_coding retained_intron MGP_LPJ_T0065895.1 MGP_LPJ_G0028298.1 mouse_genomes_project 4 72457246 72460932 - MGP_LPJ_P0065895 Aldoart1 protein_coding protein_coding MGP_LPJ_T0065896.1 MGP_LPJ_G0028298.1 mouse_genomes_project 4 72457246 72460934 - MGP_LPJ_P0065896 Aldoart1 protein_coding protein_coding MGP_LPJ_T0065794.1 MGP_LPJ_G0028272.1 mouse_genomes_project 4 61822781 61917986 + MGP_LPJ_P0065794 protein_coding protein_coding MGP_LPJ_T0065795.1 MGP_LPJ_G0028272.1 mouse_genomes_project 4 61841126 61915585 + MGP_LPJ_P0065795 protein_coding protein_coding MGP_LPJ_T0065796.1 MGP_LPJ_G0028272.1 mouse_genomes_project 4 61862112 61882329 + protein_coding processed_transcript MGP_LPJ_T0065797.1 MGP_LPJ_G0028272.1 mouse_genomes_project 4 61877339 61917986 + MGP_LPJ_P0065797 protein_coding protein_coding MGP_LPJ_T0065798.1 MGP_LPJ_G0028272.1 mouse_genomes_project 4 61881943 61889712 + protein_coding processed_transcript MGP_LPJ_T0065799.1 MGP_LPJ_G0028272.1 mouse_genomes_project 4 61882121 61884921 + protein_coding retained_intron MGP_LPJ_T0065800.1 MGP_LPJ_G0028272.1 mouse_genomes_project 4 61892555 61966989 + protein_coding retained_intron MGP_LPJ_T0065801.1 MGP_LPJ_G0028272.1 mouse_genomes_project 4 61892555 61959344 + protein_coding retained_intron MGP_LPJ_T0065802.1 MGP_LPJ_G0028272.1 mouse_genomes_project 4 61910719 61917986 + protein_coding retained_intron MGP_LPJ_T0065803.1 MGP_LPJ_G0028272.1 mouse_genomes_project 4 61947672 61966991 + MGP_LPJ_P0065803 protein_coding unknown_likely_coding MGP_LPJ_T0065804.1 MGP_LPJ_G0028272.1 mouse_genomes_project 4 61960888 61966989 + protein_coding retained_intron MGP_LPJ_T0065805.1 MGP_LPJ_G0028272.1 mouse_genomes_project 4 61961102 61962576 + protein_coding processed_transcript MGP_LPJ_T0065806.1 MGP_LPJ_G0028272.1 mouse_genomes_project 4 61962117 61967972 + MGP_LPJ_P0065806 protein_coding protein_coding MGP_LPJ_T0014462.1 MGP_LPJ_G0012553.1 mouse_genomes_project 4 35694305 35704110 - processed_pseudogene processed_pseudogene MGP_LPJ_T0064626.1 MGP_LPJ_G0027996.1 mouse_genomes_project 4 12812592 12839713 + MGP_LPJ_P0064626 Calb1 protein_coding protein_coding MGP_LPJ_T0064627.1 MGP_LPJ_G0027996.1 mouse_genomes_project 4 12812594 12827152 + Calb1 protein_coding retained_intron MGP_LPJ_T0064628.1 MGP_LPJ_G0027996.1 mouse_genomes_project 4 12816847 12827465 + Calb1 protein_coding retained_intron MGP_LPJ_T0004641.1 MGP_LPJ_G0004025.1 mouse_genomes_project 4 160032771 160050507 + antisense antisense MGP_LPJ_T0004642.1 MGP_LPJ_G0004025.1 mouse_genomes_project 4 160032785 160033850 + antisense antisense MGP_LPJ_T0004643.1 MGP_LPJ_G0004025.1 mouse_genomes_project 4 160032803 160035050 + antisense antisense MGP_LPJ_T0004644.1 MGP_LPJ_G0004025.1 mouse_genomes_project 4 160032814 160035061 + antisense antisense MGP_LPJ_T0010606.1 MGP_LPJ_G0008724.1 mouse_genomes_project 4 38822912 38823017 - Mir5123 miRNA miRNA MGP_LPJ_T0067232.1 MGP_LPJ_G0028582.1 mouse_genomes_project 4 119679783 119695681 - MGP_LPJ_P0067232 Mpl protein_coding protein_coding MGP_LPJ_T0067233.1 MGP_LPJ_G0028582.1 mouse_genomes_project 4 119679785 119695663 - MGP_LPJ_P0067233 Mpl protein_coding protein_coding MGP_LPJ_T0067234.1 MGP_LPJ_G0028582.1 mouse_genomes_project 4 119680640 119695625 - MGP_LPJ_P0067234 Mpl protein_coding protein_coding MGP_LPJ_T0067235.1 MGP_LPJ_G0028582.1 mouse_genomes_project 4 119680797 119695618 - MGP_LPJ_P0067235 Mpl protein_coding protein_coding MGP_LPJ_T0066423.1 MGP_LPJ_G0028420.1 mouse_genomes_project 4 103864624 103908958 - MGP_LPJ_P0066423 Slc35d1 protein_coding protein_coding MGP_LPJ_T0066424.1 MGP_LPJ_G0028420.1 mouse_genomes_project 4 103864631 103908597 - MGP_LPJ_P0066424 Slc35d1 protein_coding protein_coding MGP_LPJ_T0066425.1 MGP_LPJ_G0028420.1 mouse_genomes_project 4 103895136 103908597 - MGP_LPJ_P0066425 Slc35d1 protein_coding nonsense_mediated_decay MGP_LPJ_T0066426.1 MGP_LPJ_G0028420.1 mouse_genomes_project 4 103904125 103908593 - Slc35d1 protein_coding retained_intron MGP_LPJ_T0066427.1 MGP_LPJ_G0028420.1 mouse_genomes_project 4 103904346 103908466 - Slc35d1 protein_coding retained_intron MGP_LPJ_T0018005.1 MGP_LPJ_G0015467.1 mouse_genomes_project 4 73431960 73440865 + Gm11240 processed_transcript processed_transcript MGP_LPJ_T0007817.1 MGP_LPJ_G0006388.1 mouse_genomes_project 4 7847291 7851487 + Gm11827 lincRNA lincRNA MGP_LPJ_T0007818.1 MGP_LPJ_G0006388.1 mouse_genomes_project 4 7848446 7851487 + Gm11827 lincRNA lincRNA MGP_LPJ_T0100761.1 MGP_LPJ_G0039024.1 mouse_genomes_project 4 55542118 55542250 - Gm26144 snoRNA snoRNA MGP_LPJ_T0068649.1 MGP_LPJ_G0028908.1 mouse_genomes_project 4 141280846 141286546 + MGP_LPJ_P0068649 Camk2n1 protein_coding protein_coding MGP_LPJ_T0069265.1 MGP_LPJ_G0029066.1 mouse_genomes_project 4 155052484 155054358 + MGP_LPJ_P0069265 Gm13090 protein_coding protein_coding MGP_LPJ_T0067241.1 MGP_LPJ_G0028585.1 mouse_genomes_project 4 119778376 119781164 - MGP_LPJ_P0067241 Tmem125 protein_coding protein_coding MGP_LPJ_T0067242.1 MGP_LPJ_G0028585.1 mouse_genomes_project 4 119779294 119781480 - MGP_LPJ_P0067242 Tmem125 protein_coding protein_coding MGP_LPJ_T0067243.1 MGP_LPJ_G0028585.1 mouse_genomes_project 4 119779452 119780398 - MGP_LPJ_P0067243 Tmem125 protein_coding protein_coding MGP_LPJ_T0067244.1 MGP_LPJ_G0028585.1 mouse_genomes_project 4 119779502 119780725 - MGP_LPJ_P0067244 Tmem125 protein_coding protein_coding MGP_LPJ_T0067245.1 MGP_LPJ_G0028585.1 mouse_genomes_project 4 119780037 119780685 - Tmem125 protein_coding processed_transcript MGP_LPJ_T0064622.1 MGP_LPJ_G0027994.1 mouse_genomes_project 4 11885785 12086888 - MGP_LPJ_P0064622 Necab1 protein_coding protein_coding MGP_LPJ_T0064623.1 MGP_LPJ_G0027994.1 mouse_genomes_project 4 11888469 12087535 - MGP_LPJ_P0064623 Necab1 protein_coding protein_coding MGP_LPJ_T0064624.1 MGP_LPJ_G0027994.1 mouse_genomes_project 4 12049330 12086718 - Necab1 protein_coding processed_transcript MGP_LPJ_T0066706.1 MGP_LPJ_G0028478.1 mouse_genomes_project 4 109842551 109844180 + MGP_LPJ_P0066706 Kti12 protein_coding protein_coding MGP_LPJ_T0066267.1 MGP_LPJ_G0028387.1 mouse_genomes_project 4 99247860 99326448 - MGP_LPJ_P0066267 Kank4 protein_coding protein_coding MGP_LPJ_T0066268.1 MGP_LPJ_G0028387.1 mouse_genomes_project 4 99249267 99278135 - Kank4 protein_coding processed_transcript MGP_LPJ_T0014701.1 MGP_LPJ_G0012792.1 mouse_genomes_project 4 122550272 122554752 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011599.1 MGP_LPJ_G0009717.1 mouse_genomes_project 4 146593840 146594148 + Gm26313 misc_RNA misc_RNA MGP_LPJ_T0007908.1 MGP_LPJ_G0006466.1 mouse_genomes_project 4 92828139 92848485 + Gm12637 lincRNA lincRNA MGP_LPJ_T0065003.1 MGP_LPJ_G0028092.1 mouse_genomes_project 4 39770478 39778851 - MGP_LPJ_P0065003 Dctn3 protein_coding protein_coding MGP_LPJ_T0065004.1 MGP_LPJ_G0028092.1 mouse_genomes_project 4 39770478 39778844 - MGP_LPJ_P0065004 Dctn3 protein_coding protein_coding MGP_LPJ_T0065005.1 MGP_LPJ_G0028092.1 mouse_genomes_project 4 39775448 39778818 - Dctn3 protein_coding processed_transcript MGP_LPJ_T0014756.1 MGP_LPJ_G0012847.1 mouse_genomes_project 4 139918364 139919046 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017993.1 MGP_LPJ_G0015459.1 mouse_genomes_project 4 42313468 42333392 + Gm12503 processed_transcript processed_transcript MGP_LPJ_T0068251.1 MGP_LPJ_G0028819.1 mouse_genomes_project 4 136410840 136428061 - MGP_LPJ_P0068251 Lin28a protein_coding protein_coding MGP_LPJ_T0068252.1 MGP_LPJ_G0028819.1 mouse_genomes_project 4 136414167 136421082 - MGP_LPJ_P0068252 Lin28a protein_coding protein_coding MGP_LPJ_T0068253.1 MGP_LPJ_G0028819.1 mouse_genomes_project 4 136414173 136418114 - MGP_LPJ_P0068253 Lin28a protein_coding protein_coding MGP_LPJ_T0068254.1 MGP_LPJ_G0028819.1 mouse_genomes_project 4 136415941 136427602 - MGP_LPJ_P0068254 Lin28a protein_coding protein_coding MGP_LPJ_T0018067.1 MGP_LPJ_G0015504.1 mouse_genomes_project 4 160361419 160368537 - Gm13648 processed_transcript processed_transcript MGP_LPJ_T0065541.1 MGP_LPJ_G0028200.1 mouse_genomes_project 4 48143854 48157107 - MGP_LPJ_P0065541 Tmem246 protein_coding protein_coding MGP_LPJ_T0065542.1 MGP_LPJ_G0028200.1 mouse_genomes_project 4 48146114 48156701 - MGP_LPJ_P0065542 Tmem246 protein_coding protein_coding MGP_LPJ_T0065543.1 MGP_LPJ_G0028200.1 mouse_genomes_project 4 48146400 48153247 - MGP_LPJ_P0065543 Tmem246 protein_coding protein_coding MGP_LPJ_T0099547.1 MGP_LPJ_G0037810.1 mouse_genomes_project 4 159984331 159984433 - Gm22573 snRNA snRNA MGP_LPJ_T0004482.1 MGP_LPJ_G0003905.1 mouse_genomes_project 4 56061501 56065985 + Gm12530 antisense antisense MGP_LPJ_T0067743.1 MGP_LPJ_G0028720.1 mouse_genomes_project 4 131035790 131055643 + MGP_LPJ_P0067743 Trim62 protein_coding nonsense_mediated_decay MGP_LPJ_T0067744.1 MGP_LPJ_G0028720.1 mouse_genomes_project 4 131035798 131064955 + MGP_LPJ_P0067744 Trim62 protein_coding protein_coding MGP_LPJ_T0099503.1 MGP_LPJ_G0037766.1 mouse_genomes_project 4 101770313 101770417 + Gm24468 snRNA snRNA MGP_LPJ_T0004542.1 MGP_LPJ_G0003948.1 mouse_genomes_project 4 119880526 119883673 - Gm12853 antisense antisense MGP_LPJ_T0100790.1 MGP_LPJ_G0039053.1 mouse_genomes_project 4 118297131 118297201 - Gm22980 snoRNA snoRNA MGP_LPJ_T0068195.1 MGP_LPJ_G0028807.1 mouse_genomes_project 4 135866855 135874308 - MGP_LPJ_P0068195 Trnp1 protein_coding protein_coding MGP_LPJ_T0068196.1 MGP_LPJ_G0028807.1 mouse_genomes_project 4 135866873 135873477 - Trnp1 protein_coding processed_transcript MGP_LPJ_T0014432.1 MGP_LPJ_G0012523.1 mouse_genomes_project 4 26010720 26011638 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014411.1 MGP_LPJ_G0012502.1 mouse_genomes_project 4 20654317 20655396 - processed_pseudogene processed_pseudogene MGP_LPJ_T0067169.1 MGP_LPJ_G0028571.1 mouse_genomes_project 4 119075713 119078718 - MGP_LPJ_P0067169 Atp6v0b protein_coding protein_coding MGP_LPJ_T0067170.1 MGP_LPJ_G0028571.1 mouse_genomes_project 4 119075717 119077282 - Atp6v0b protein_coding retained_intron MGP_LPJ_T0067171.1 MGP_LPJ_G0028571.1 mouse_genomes_project 4 119075720 119078709 - MGP_LPJ_P0067171 Atp6v0b protein_coding protein_coding MGP_LPJ_T0067172.1 MGP_LPJ_G0028571.1 mouse_genomes_project 4 119075832 119077188 - Atp6v0b protein_coding retained_intron MGP_LPJ_T0067173.1 MGP_LPJ_G0028571.1 mouse_genomes_project 4 119076551 119078024 - Atp6v0b protein_coding retained_intron MGP_LPJ_T0067174.1 MGP_LPJ_G0028571.1 mouse_genomes_project 4 119076618 119077946 - MGP_LPJ_P0067174 Atp6v0b protein_coding protein_coding MGP_LPJ_T0067175.1 MGP_LPJ_G0028571.1 mouse_genomes_project 4 119077022 119078676 - MGP_LPJ_P0067175 Atp6v0b protein_coding protein_coding MGP_LPJ_T0067176.1 MGP_LPJ_G0028571.1 mouse_genomes_project 4 119077668 119078722 - MGP_LPJ_P0067176 Atp6v0b protein_coding protein_coding MGP_LPJ_T0067177.1 MGP_LPJ_G0028571.1 mouse_genomes_project 4 119077709 119078716 - MGP_LPJ_P0067177 Atp6v0b protein_coding protein_coding MGP_LPJ_T0014563.1 MGP_LPJ_G0012654.1 mouse_genomes_project 4 75010351 75011531 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014357.1 MGP_LPJ_G0012448.1 mouse_genomes_project 4 5266156 5267106 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014509.1 MGP_LPJ_G0012600.1 mouse_genomes_project 4 52039813 52040260 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011597.1 MGP_LPJ_G0009715.1 mouse_genomes_project 4 125224079 125224185 + Gm23548 misc_RNA misc_RNA MGP_LPJ_T0065499.1 MGP_LPJ_G0028186.1 mouse_genomes_project 4 46592868 46655247 + MGP_LPJ_P0065499 Stx17 protein_coding protein_coding MGP_LPJ_T0065500.1 MGP_LPJ_G0028186.1 mouse_genomes_project 4 46592876 46631179 + MGP_LPJ_P0065500 Stx17 protein_coding protein_coding MGP_LPJ_T0065501.1 MGP_LPJ_G0028186.1 mouse_genomes_project 4 46592879 46655842 + MGP_LPJ_P0065501 Stx17 protein_coding protein_coding MGP_LPJ_T0065502.1 MGP_LPJ_G0028186.1 mouse_genomes_project 4 46592888 46651567 + MGP_LPJ_P0065502 Stx17 protein_coding protein_coding MGP_LPJ_T0010649.1 MGP_LPJ_G0008767.1 mouse_genomes_project 4 134712950 134713046 + Gm25707 miRNA miRNA MGP_LPJ_T0098034.1 MGP_LPJ_G0036315.1 mouse_genomes_project 4 58549269 58549741 + pseudogene pseudogene MGP_LPJ_T0014523.1 MGP_LPJ_G0012614.1 mouse_genomes_project 4 54995331 54995647 + processed_pseudogene processed_pseudogene MGP_LPJ_T0064822.1 MGP_LPJ_G0028048.1 mouse_genomes_project 4 32219797 32232243 + Akirin2 protein_coding processed_transcript MGP_LPJ_T0064823.1 MGP_LPJ_G0028048.1 mouse_genomes_project 4 32219797 32236382 + MGP_LPJ_P0064823 Akirin2 protein_coding protein_coding MGP_LPJ_T0007829.1 MGP_LPJ_G0006398.1 mouse_genomes_project 4 17099221 17107873 - 4930598A11Rik lincRNA lincRNA MGP_LPJ_T0065897.1 MGP_LPJ_G0028299.1 mouse_genomes_project 4 73034797 73035216 - MGP_LPJ_P0065897 protein_coding protein_coding MGP_LPJ_T0004470.1 MGP_LPJ_G0003895.1 mouse_genomes_project 4 42915947 42936812 + Gm12462 antisense antisense MGP_LPJ_T0014655.1 MGP_LPJ_G0012746.1 mouse_genomes_project 4 108658100 108658541 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004510.1 MGP_LPJ_G0003923.1 mouse_genomes_project 4 99652158 99655940 + antisense antisense MGP_LPJ_T0066552.1 MGP_LPJ_G0028450.1 mouse_genomes_project 4 108126930 108153126 + MGP_LPJ_P0066552 Hspb11 protein_coding protein_coding MGP_LPJ_T0066553.1 MGP_LPJ_G0028450.1 mouse_genomes_project 4 108127235 108138038 + Hspb11 protein_coding processed_transcript MGP_LPJ_T0066554.1 MGP_LPJ_G0028450.1 mouse_genomes_project 4 108127240 108153227 + MGP_LPJ_P0066554 Hspb11 protein_coding protein_coding MGP_LPJ_T0066555.1 MGP_LPJ_G0028450.1 mouse_genomes_project 4 108127262 108153217 + MGP_LPJ_P0066555 Hspb11 protein_coding protein_coding MGP_LPJ_T0066556.1 MGP_LPJ_G0028450.1 mouse_genomes_project 4 108135757 108153221 + Hspb11 protein_coding processed_transcript MGP_LPJ_T0010672.1 MGP_LPJ_G0008790.1 mouse_genomes_project 4 151803481 151803542 - Mir7022 miRNA miRNA MGP_LPJ_T0066271.1 MGP_LPJ_G0028389.1 mouse_genomes_project 4 99443662 99456303 + MGP_LPJ_P0066271 protein_coding protein_coding MGP_LPJ_T0066272.1 MGP_LPJ_G0028389.1 mouse_genomes_project 4 99443731 99456303 + MGP_LPJ_P0066272 protein_coding protein_coding MGP_LPJ_T0066273.1 MGP_LPJ_G0028389.1 mouse_genomes_project 4 99443816 99448082 + MGP_LPJ_P0066273 protein_coding protein_coding MGP_LPJ_T0066274.1 MGP_LPJ_G0028389.1 mouse_genomes_project 4 99443955 99455039 + MGP_LPJ_P0066274 protein_coding unknown_likely_coding MGP_LPJ_T0066275.1 MGP_LPJ_G0028389.1 mouse_genomes_project 4 99447908 99450693 + MGP_LPJ_P0066275 protein_coding protein_coding MGP_LPJ_T0007931.1 MGP_LPJ_G0006485.1 mouse_genomes_project 4 107319908 107327428 - Tmem61 lincRNA lincRNA MGP_LPJ_T0007932.1 MGP_LPJ_G0006485.1 mouse_genomes_project 4 107320140 107324198 - Tmem61 lincRNA lincRNA MGP_LPJ_T0066034.1 MGP_LPJ_G0028322.1 mouse_genomes_project 4 85233066 85440053 + MGP_LPJ_P0066034 Sh3gl2 protein_coding protein_coding MGP_LPJ_T0066035.1 MGP_LPJ_G0028322.1 mouse_genomes_project 4 85233381 85429905 + MGP_LPJ_P0066035 Sh3gl2 protein_coding protein_coding MGP_LPJ_T0066036.1 MGP_LPJ_G0028322.1 mouse_genomes_project 4 85233409 85688797 + MGP_LPJ_P0066036 Sh3gl2 protein_coding protein_coding MGP_LPJ_T0066037.1 MGP_LPJ_G0028322.1 mouse_genomes_project 4 85233475 85414296 + MGP_LPJ_P0066037 Sh3gl2 protein_coding protein_coding MGP_LPJ_T0066038.1 MGP_LPJ_G0028322.1 mouse_genomes_project 4 85412945 85428096 + MGP_LPJ_P0066038 Sh3gl2 protein_coding protein_coding MGP_LPJ_T0014749.1 MGP_LPJ_G0012840.1 mouse_genomes_project 4 138479872 138480086 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004511.1 MGP_LPJ_G0003924.1 mouse_genomes_project 4 100228603 100279916 - Gm12682 antisense antisense MGP_LPJ_T0099478.1 MGP_LPJ_G0037741.1 mouse_genomes_project 4 39316806 39316914 - Gm26049 snRNA snRNA MGP_LPJ_T0068349.1 MGP_LPJ_G0028840.1 mouse_genomes_project 4 136998929 137008671 - MGP_LPJ_P0068349 Mtfr1l protein_coding protein_coding MGP_LPJ_T0068350.1 MGP_LPJ_G0028840.1 mouse_genomes_project 4 136998936 137008790 - MGP_LPJ_P0068350 Mtfr1l protein_coding protein_coding MGP_LPJ_T0068351.1 MGP_LPJ_G0028840.1 mouse_genomes_project 4 136998943 137008701 - MGP_LPJ_P0068351 Mtfr1l protein_coding nonsense_mediated_decay MGP_LPJ_T0068352.1 MGP_LPJ_G0028840.1 mouse_genomes_project 4 137001744 137008661 - Mtfr1l protein_coding retained_intron MGP_LPJ_T0068353.1 MGP_LPJ_G0028840.1 mouse_genomes_project 4 137002485 137008499 - MGP_LPJ_P0068353 Mtfr1l protein_coding protein_coding MGP_LPJ_T0068354.1 MGP_LPJ_G0028840.1 mouse_genomes_project 4 137002520 137008790 - MGP_LPJ_P0068354 Mtfr1l protein_coding protein_coding MGP_LPJ_T0068355.1 MGP_LPJ_G0028840.1 mouse_genomes_project 4 137002592 137008447 - Mtfr1l protein_coding retained_intron MGP_LPJ_T0007877.1 MGP_LPJ_G0006439.1 mouse_genomes_project 4 57607094 57618948 - Gm12580 lincRNA lincRNA MGP_LPJ_T0004562.1 MGP_LPJ_G0003964.1 mouse_genomes_project 4 130369524 130371471 + Hmgb4os antisense antisense MGP_LPJ_T0068138.1 MGP_LPJ_G0028794.1 mouse_genomes_project 4 135193402 135224321 - MGP_LPJ_P0068138 Stx12 protein_coding protein_coding MGP_LPJ_T0068139.1 MGP_LPJ_G0028794.1 mouse_genomes_project 4 135196947 135203173 - Stx12 protein_coding processed_transcript MGP_LPJ_T0099488.1 MGP_LPJ_G0037751.1 mouse_genomes_project 4 62947283 62947390 - Gm24234 snRNA snRNA MGP_LPJ_T0069200.1 MGP_LPJ_G0029054.1 mouse_genomes_project 4 154010597 154034582 + MGP_LPJ_P0069200 Slc2a7 protein_coding protein_coding MGP_LPJ_T0069201.1 MGP_LPJ_G0029054.1 mouse_genomes_project 4 154022391 154023264 + Slc2a7 protein_coding retained_intron MGP_LPJ_T0098420.1 MGP_LPJ_G0036701.1 mouse_genomes_project 4 86684110 86684241 - Scarna8 scaRNA scaRNA MGP_LPJ_T0066920.1 MGP_LPJ_G0028524.1 mouse_genomes_project 4 116945971 116949538 + MGP_LPJ_P0066920 Kncn protein_coding protein_coding MGP_LPJ_T0066921.1 MGP_LPJ_G0028524.1 mouse_genomes_project 4 116947438 116951101 + Kncn protein_coding processed_transcript MGP_LPJ_T0065827.1 MGP_LPJ_G0028277.1 mouse_genomes_project 4 62623139 62626744 + MGP_LPJ_P0065827 Orm1 protein_coding protein_coding MGP_LPJ_T0067971.1 MGP_LPJ_G0028762.1 mouse_genomes_project 4 132648983 132693661 - MGP_LPJ_P0067971 Zcchc17 protein_coding protein_coding MGP_LPJ_T0067972.1 MGP_LPJ_G0028762.1 mouse_genomes_project 4 132649879 132652340 - Zcchc17 protein_coding processed_transcript MGP_LPJ_T0067973.1 MGP_LPJ_G0028762.1 mouse_genomes_project 4 132650295 132677913 - Zcchc17 protein_coding processed_transcript MGP_LPJ_T0067974.1 MGP_LPJ_G0028762.1 mouse_genomes_project 4 132670183 132671890 - Zcchc17 protein_coding processed_transcript MGP_LPJ_T0067975.1 MGP_LPJ_G0028762.1 mouse_genomes_project 4 132685881 132693634 - Zcchc17 protein_coding retained_intron MGP_LPJ_T0069708.1 MGP_LPJ_G0029146.1 mouse_genomes_project 4 160319971 160322735 + MGP_LPJ_P0069708 Tnfrsf4 protein_coding protein_coding MGP_LPJ_T0069709.1 MGP_LPJ_G0029146.1 mouse_genomes_project 4 160319984 160322722 + Tnfrsf4 protein_coding processed_transcript MGP_LPJ_T0069710.1 MGP_LPJ_G0029146.1 mouse_genomes_project 4 160320373 160321383 + Tnfrsf4 protein_coding processed_transcript MGP_LPJ_T0067803.1 MGP_LPJ_G0028731.1 mouse_genomes_project 4 131501127 131528422 - MGP_LPJ_P0067803 Rbbp4 protein_coding protein_coding MGP_LPJ_T0067804.1 MGP_LPJ_G0028731.1 mouse_genomes_project 4 131503542 131527697 - Rbbp4 protein_coding processed_transcript MGP_LPJ_T0067805.1 MGP_LPJ_G0028731.1 mouse_genomes_project 4 131517898 131528301 - Rbbp4 protein_coding retained_intron MGP_LPJ_T0067806.1 MGP_LPJ_G0028731.1 mouse_genomes_project 4 131521713 131528135 - MGP_LPJ_P0067806 Rbbp4 protein_coding protein_coding MGP_LPJ_T0069628.1 MGP_LPJ_G0029129.1 mouse_genomes_project 4 160039546 160055944 - MGP_LPJ_P0069628 Vwa1 protein_coding protein_coding MGP_LPJ_T0067423.1 MGP_LPJ_G0028635.1 mouse_genomes_project 4 122743662 122846300 - MGP_LPJ_P0067423 Gm12886 protein_coding protein_coding MGP_LPJ_T0102157.1 MGP_LPJ_G0040194.1 mouse_genomes_project 4 119934761 119935676 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0099499.1 MGP_LPJ_G0037762.1 mouse_genomes_project 4 97358325 97358389 + Gm27521 snRNA snRNA MGP_LPJ_T0014533.1 MGP_LPJ_G0012624.1 mouse_genomes_project 4 61932655 61964526 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004481.1 MGP_LPJ_G0003904.1 mouse_genomes_project 4 52312762 52314477 - 1700060J05Rik antisense antisense MGP_LPJ_T0102168.1 MGP_LPJ_G0040205.1 mouse_genomes_project 4 146727041 146727542 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0007955.1 MGP_LPJ_G0006504.1 mouse_genomes_project 4 126143195 126149352 - 4933435F18Rik lincRNA lincRNA MGP_LPJ_T0007956.1 MGP_LPJ_G0006504.1 mouse_genomes_project 4 126148231 126149311 - 4933435F18Rik lincRNA lincRNA MGP_LPJ_T0064930.1 MGP_LPJ_G0028072.1 mouse_genomes_project 4 38914844 38926732 - MGP_LPJ_P0064930 Bag1 protein_coding protein_coding MGP_LPJ_T0064931.1 MGP_LPJ_G0028072.1 mouse_genomes_project 4 38914845 38926745 - MGP_LPJ_P0064931 Bag1 protein_coding protein_coding MGP_LPJ_T0064932.1 MGP_LPJ_G0028072.1 mouse_genomes_project 4 38914847 38926694 - MGP_LPJ_P0064932 Bag1 protein_coding protein_coding MGP_LPJ_T0069741.1 MGP_LPJ_G0029152.1 mouse_genomes_project 4 160522333 160524184 + MGP_LPJ_P0069741 AW011738 protein_coding protein_coding MGP_LPJ_T0004473.1 MGP_LPJ_G0003898.1 mouse_genomes_project 4 43277663 43281383 + 1700055D18Rik antisense antisense MGP_LPJ_T0004474.1 MGP_LPJ_G0003898.1 mouse_genomes_project 4 43278806 43280376 + 1700055D18Rik antisense antisense MGP_LPJ_T0014787.1 MGP_LPJ_G0012878.1 mouse_genomes_project 4 158197727 158197833 - processed_pseudogene processed_pseudogene MGP_LPJ_T0066858.1 MGP_LPJ_G0028507.1 mouse_genomes_project 4 115970164 116015048 + MGP_LPJ_P0066858 Stil protein_coding protein_coding MGP_LPJ_T0066859.1 MGP_LPJ_G0028507.1 mouse_genomes_project 4 115970187 116011100 + MGP_LPJ_P0066859 Stil protein_coding protein_coding MGP_LPJ_T0066860.1 MGP_LPJ_G0028507.1 mouse_genomes_project 4 115970187 116015048 + MGP_LPJ_P0066860 Stil protein_coding nonsense_mediated_decay MGP_LPJ_T0066861.1 MGP_LPJ_G0028507.1 mouse_genomes_project 4 115976758 115986430 + MGP_LPJ_P0066861 Stil protein_coding nonsense_mediated_decay MGP_LPJ_T0066862.1 MGP_LPJ_G0028507.1 mouse_genomes_project 4 115980118 115992950 + Stil protein_coding processed_transcript MGP_LPJ_T0066863.1 MGP_LPJ_G0028507.1 mouse_genomes_project 4 115986364 115994507 + Stil protein_coding retained_intron MGP_LPJ_T0014591.1 MGP_LPJ_G0012682.1 mouse_genomes_project 4 86535183 86535512 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098255.1 MGP_LPJ_G0036536.1 mouse_genomes_project 4 41879093 41879225 + Gm23257 rRNA rRNA MGP_LPJ_T0014500.1 MGP_LPJ_G0012591.1 mouse_genomes_project 4 50564133 50565372 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010632.1 MGP_LPJ_G0008750.1 mouse_genomes_project 4 110022558 110022634 + Mir761 miRNA miRNA MGP_LPJ_T0066118.1 MGP_LPJ_G0028343.1 mouse_genomes_project 4 88904677 88905562 - MGP_LPJ_P0066118 Ifna2 protein_coding protein_coding MGP_LPJ_T0014370.1 MGP_LPJ_G0012461.1 mouse_genomes_project 4 8927209 8927871 - processed_pseudogene processed_pseudogene MGP_LPJ_T0066302.1 MGP_LPJ_G0028394.1 mouse_genomes_project 4 100222438 100224752 + MGP_LPJ_P0066302 Foxd3 protein_coding protein_coding MGP_LPJ_T0066901.1 MGP_LPJ_G0028521.1 mouse_genomes_project 4 116852066 116865240 + MGP_LPJ_P0066901 Atpaf1 protein_coding protein_coding MGP_LPJ_T0066902.1 MGP_LPJ_G0028521.1 mouse_genomes_project 4 116852233 116875789 + MGP_LPJ_P0066902 Atpaf1 protein_coding unknown_likely_coding MGP_LPJ_T0018065.1 MGP_LPJ_G0015503.1 mouse_genomes_project 4 159874442 159890866 - Gm16023 processed_transcript processed_transcript MGP_LPJ_T0018066.1 MGP_LPJ_G0015503.1 mouse_genomes_project 4 159882114 159890591 - Gm16023 processed_transcript processed_transcript MGP_LPJ_T0007880.1 MGP_LPJ_G0006442.1 mouse_genomes_project 4 61980873 61984895 - Gm11211 lincRNA lincRNA MGP_LPJ_T0069725.1 MGP_LPJ_G0029149.1 mouse_genomes_project 4 160425416 160446852 + MGP_LPJ_P0069725 9430015G10Rik protein_coding protein_coding MGP_LPJ_T0069726.1 MGP_LPJ_G0029149.1 mouse_genomes_project 4 160425419 160446852 + 9430015G10Rik protein_coding processed_transcript MGP_LPJ_T0069727.1 MGP_LPJ_G0029149.1 mouse_genomes_project 4 160425432 160446850 + MGP_LPJ_P0069727 9430015G10Rik protein_coding protein_coding MGP_LPJ_T0069728.1 MGP_LPJ_G0029149.1 mouse_genomes_project 4 160425433 160445805 + MGP_LPJ_P0069728 9430015G10Rik protein_coding protein_coding MGP_LPJ_T0069729.1 MGP_LPJ_G0029149.1 mouse_genomes_project 4 160425453 160441777 + 9430015G10Rik protein_coding processed_transcript MGP_LPJ_T0069730.1 MGP_LPJ_G0029149.1 mouse_genomes_project 4 160425464 160442011 + 9430015G10Rik protein_coding processed_transcript MGP_LPJ_T0069731.1 MGP_LPJ_G0029149.1 mouse_genomes_project 4 160425473 160432489 + 9430015G10Rik protein_coding processed_transcript MGP_LPJ_T0069732.1 MGP_LPJ_G0029149.1 mouse_genomes_project 4 160429614 160439090 + 9430015G10Rik protein_coding processed_transcript MGP_LPJ_T0064734.1 MGP_LPJ_G0028026.1 mouse_genomes_project 4 22414022 22455462 - MGP_LPJ_P0064734 Fhl5 protein_coding protein_coding MGP_LPJ_T0064735.1 MGP_LPJ_G0028026.1 mouse_genomes_project 4 22414022 22455462 - MGP_LPJ_P0064735 Fhl5 protein_coding protein_coding MGP_LPJ_T0014349.1 MGP_LPJ_G0012440.1 mouse_genomes_project 4 2424220 2425192 - processed_pseudogene processed_pseudogene MGP_LPJ_T0067007.1 MGP_LPJ_G0028542.1 mouse_genomes_project 4 117711055 117739023 - MGP_LPJ_P0067007 Nasp protein_coding protein_coding MGP_LPJ_T0067008.1 MGP_LPJ_G0028542.1 mouse_genomes_project 4 117711612 117739467 - MGP_LPJ_P0067008 Nasp protein_coding protein_coding MGP_LPJ_T0067009.1 MGP_LPJ_G0028542.1 mouse_genomes_project 4 117711612 117739004 - MGP_LPJ_P0067009 Nasp protein_coding protein_coding MGP_LPJ_T0067010.1 MGP_LPJ_G0028542.1 mouse_genomes_project 4 117712729 117716252 - Nasp protein_coding processed_transcript MGP_LPJ_T0067011.1 MGP_LPJ_G0028542.1 mouse_genomes_project 4 117712795 117714929 - Nasp protein_coding processed_transcript MGP_LPJ_T0067012.1 MGP_LPJ_G0028542.1 mouse_genomes_project 4 117721470 117739019 - Nasp protein_coding processed_transcript MGP_LPJ_T0067013.1 MGP_LPJ_G0028542.1 mouse_genomes_project 4 117727789 117735534 - Nasp protein_coding processed_transcript MGP_LPJ_T0067014.1 MGP_LPJ_G0028542.1 mouse_genomes_project 4 117729391 117738974 - Nasp protein_coding processed_transcript MGP_LPJ_T0014532.1 MGP_LPJ_G0012623.1 mouse_genomes_project 4 60941704 60942866 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102146.1 MGP_LPJ_G0040183.1 mouse_genomes_project 4 96659402 96684455 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0069495.1 MGP_LPJ_G0029107.1 mouse_genomes_project 4 159171797 159188514 + MGP_LPJ_P0069495 Pank4 protein_coding protein_coding MGP_LPJ_T0069496.1 MGP_LPJ_G0029107.1 mouse_genomes_project 4 159171807 159188581 + MGP_LPJ_P0069496 Pank4 protein_coding protein_coding MGP_LPJ_T0069497.1 MGP_LPJ_G0029107.1 mouse_genomes_project 4 159177648 159188532 + MGP_LPJ_P0069497 Pank4 protein_coding nonsense_mediated_decay MGP_LPJ_T0069498.1 MGP_LPJ_G0029107.1 mouse_genomes_project 4 159182182 159188581 + Pank4 protein_coding retained_intron MGP_LPJ_T0069499.1 MGP_LPJ_G0029107.1 mouse_genomes_project 4 159183914 159186798 + Pank4 protein_coding retained_intron MGP_LPJ_T0069500.1 MGP_LPJ_G0029107.1 mouse_genomes_project 4 159183922 159186868 + Pank4 protein_coding retained_intron MGP_LPJ_T0069501.1 MGP_LPJ_G0029107.1 mouse_genomes_project 4 159184221 159188577 + Pank4 protein_coding retained_intron MGP_LPJ_T0069668.1 MGP_LPJ_G0029139.1 mouse_genomes_project 4 160167452 160191052 + Cpsf3l protein_coding processed_transcript MGP_LPJ_T0069669.1 MGP_LPJ_G0029139.1 mouse_genomes_project 4 160167452 160191666 + MGP_LPJ_P0069669 Cpsf3l protein_coding protein_coding MGP_LPJ_T0069670.1 MGP_LPJ_G0029139.1 mouse_genomes_project 4 160167452 160191038 + MGP_LPJ_P0069670 Cpsf3l protein_coding protein_coding MGP_LPJ_T0069671.1 MGP_LPJ_G0029139.1 mouse_genomes_project 4 160167473 160170228 + Cpsf3l protein_coding retained_intron MGP_LPJ_T0069672.1 MGP_LPJ_G0029139.1 mouse_genomes_project 4 160167521 160189278 + MGP_LPJ_P0069672 Cpsf3l protein_coding nonsense_mediated_decay MGP_LPJ_T0069673.1 MGP_LPJ_G0029139.1 mouse_genomes_project 4 160190137 160190840 + Cpsf3l protein_coding retained_intron MGP_LPJ_T0069675.1 MGP_LPJ_G0029139.1 mouse_genomes_project 4 160190475 160191086 + Cpsf3l protein_coding retained_intron MGP_LPJ_T0069250.1 MGP_LPJ_G0029064.1 mouse_genomes_project 4 154965923 155006774 - MGP_LPJ_P0069250 Per3 protein_coding protein_coding MGP_LPJ_T0069251.1 MGP_LPJ_G0029064.1 mouse_genomes_project 4 154966057 154978400 - Per3 protein_coding processed_transcript MGP_LPJ_T0069252.1 MGP_LPJ_G0029064.1 mouse_genomes_project 4 154973704 154993734 - Per3 protein_coding retained_intron MGP_LPJ_T0069253.1 MGP_LPJ_G0029064.1 mouse_genomes_project 4 154973704 155006774 - MGP_LPJ_P0069253 Per3 protein_coding nonsense_mediated_decay MGP_LPJ_T0069254.1 MGP_LPJ_G0029064.1 mouse_genomes_project 4 154986439 155006774 - Per3 protein_coding retained_intron MGP_LPJ_T0064853.1 MGP_LPJ_G0028054.1 mouse_genomes_project 4 32450723 32460408 - MGP_LPJ_P0064853 Smim8 protein_coding protein_coding MGP_LPJ_T0064854.1 MGP_LPJ_G0028054.1 mouse_genomes_project 4 32450723 32460423 - MGP_LPJ_P0064854 Smim8 protein_coding protein_coding MGP_LPJ_T0064855.1 MGP_LPJ_G0028054.1 mouse_genomes_project 4 32450723 32460482 - MGP_LPJ_P0064855 Smim8 protein_coding protein_coding MGP_LPJ_T0064856.1 MGP_LPJ_G0028054.1 mouse_genomes_project 4 32450723 32460396 - MGP_LPJ_P0064856 Smim8 protein_coding protein_coding MGP_LPJ_T0064857.1 MGP_LPJ_G0028054.1 mouse_genomes_project 4 32450723 32460329 - MGP_LPJ_P0064857 Smim8 protein_coding protein_coding MGP_LPJ_T0064858.1 MGP_LPJ_G0028054.1 mouse_genomes_project 4 32450734 32460390 - Smim8 protein_coding processed_transcript MGP_LPJ_T0064859.1 MGP_LPJ_G0028054.1 mouse_genomes_project 4 32452947 32460414 - Smim8 protein_coding retained_intron MGP_LPJ_T0064860.1 MGP_LPJ_G0028054.1 mouse_genomes_project 4 32453305 32460277 - Smim8 protein_coding processed_transcript MGP_LPJ_T0018011.1 MGP_LPJ_G0015472.1 mouse_genomes_project 4 89641843 89684421 + Gm12610 processed_transcript processed_transcript MGP_LPJ_T0007970.1 MGP_LPJ_G0006510.1 mouse_genomes_project 4 129586993 129588257 + 1700080G11Rik lincRNA lincRNA MGP_LPJ_T0008017.1 MGP_LPJ_G0006541.1 mouse_genomes_project 4 140086338 140087455 - 2810405F17Rik lincRNA lincRNA MGP_LPJ_T0069717.1 MGP_LPJ_G0029148.1 mouse_genomes_project 4 160344534 160359643 - MGP_LPJ_P0069717 Ttll10 protein_coding protein_coding MGP_LPJ_T0069718.1 MGP_LPJ_G0029148.1 mouse_genomes_project 4 160344607 160368149 - MGP_LPJ_P0069718 Ttll10 protein_coding protein_coding MGP_LPJ_T0069719.1 MGP_LPJ_G0029148.1 mouse_genomes_project 4 160344994 160359291 - MGP_LPJ_P0069719 Ttll10 protein_coding protein_coding MGP_LPJ_T0069720.1 MGP_LPJ_G0029148.1 mouse_genomes_project 4 160345499 160353059 - Ttll10 protein_coding processed_transcript MGP_LPJ_T0069721.1 MGP_LPJ_G0029148.1 mouse_genomes_project 4 160351401 160368076 - Ttll10 protein_coding retained_intron MGP_LPJ_T0069722.1 MGP_LPJ_G0029148.1 mouse_genomes_project 4 160352134 160353922 - Ttll10 protein_coding processed_transcript MGP_LPJ_T0069723.1 MGP_LPJ_G0029148.1 mouse_genomes_project 4 160352144 160356790 - Ttll10 protein_coding processed_transcript MGP_LPJ_T0069724.1 MGP_LPJ_G0029148.1 mouse_genomes_project 4 160355604 160356758 - Ttll10 protein_coding retained_intron MGP_LPJ_T0008039.1 MGP_LPJ_G0006562.1 mouse_genomes_project 4 153902489 153910430 + Gm13067 lincRNA lincRNA MGP_LPJ_T0010667.1 MGP_LPJ_G0008785.1 mouse_genomes_project 4 142906436 142906531 - Mir2139 miRNA miRNA MGP_LPJ_T0065643.1 MGP_LPJ_G0028229.1 mouse_genomes_project 4 55833190 55870050 - MGP_LPJ_P0065643 Frrs1l protein_coding protein_coding MGP_LPJ_T0065644.1 MGP_LPJ_G0028229.1 mouse_genomes_project 4 55835835 55869795 - MGP_LPJ_P0065644 Frrs1l protein_coding nonsense_mediated_decay MGP_LPJ_T0064700.1 MGP_LPJ_G0028018.1 mouse_genomes_project 4 18978852 19017757 + MGP_LPJ_P0064700 Coq3 protein_coding protein_coding MGP_LPJ_T0064701.1 MGP_LPJ_G0028018.1 mouse_genomes_project 4 19003098 19004828 + Coq3 protein_coding processed_transcript MGP_LPJ_T0068433.1 MGP_LPJ_G0028859.1 mouse_genomes_project 4 138320909 138395598 + MGP_LPJ_P0068433 Myom3 protein_coding protein_coding MGP_LPJ_T0068434.1 MGP_LPJ_G0028859.1 mouse_genomes_project 4 138359733 138395598 + Myom3 protein_coding retained_intron MGP_LPJ_T0068435.1 MGP_LPJ_G0028859.1 mouse_genomes_project 4 138366372 138386199 + Myom3 protein_coding retained_intron MGP_LPJ_T0069522.1 MGP_LPJ_G0029111.1 mouse_genomes_project 4 159302164 159370240 + MGP_LPJ_P0069522 Morn1 protein_coding protein_coding MGP_LPJ_T0069523.1 MGP_LPJ_G0029111.1 mouse_genomes_project 4 159302164 159331651 + MGP_LPJ_P0069523 Morn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0069524.1 MGP_LPJ_G0029111.1 mouse_genomes_project 4 159302176 159310011 + MGP_LPJ_P0069524 Morn1 protein_coding protein_coding MGP_LPJ_T0069525.1 MGP_LPJ_G0029111.1 mouse_genomes_project 4 159302190 159310292 + MGP_LPJ_P0069525 Morn1 protein_coding protein_coding MGP_LPJ_T0069526.1 MGP_LPJ_G0029111.1 mouse_genomes_project 4 159302201 159364019 + Morn1 protein_coding processed_transcript MGP_LPJ_T0069527.1 MGP_LPJ_G0029111.1 mouse_genomes_project 4 159302215 159363997 + Morn1 protein_coding processed_transcript MGP_LPJ_T0069528.1 MGP_LPJ_G0029111.1 mouse_genomes_project 4 159319107 159352820 + Morn1 protein_coding retained_intron MGP_LPJ_T0069529.1 MGP_LPJ_G0029111.1 mouse_genomes_project 4 159330159 159352384 + Morn1 protein_coding retained_intron MGP_LPJ_T0068685.1 MGP_LPJ_G0028920.1 mouse_genomes_project 4 141949805 141966090 - MGP_LPJ_P0068685 Htr6 protein_coding protein_coding MGP_LPJ_T0068686.1 MGP_LPJ_G0028920.1 mouse_genomes_project 4 141950106 141965309 - MGP_LPJ_P0068686 Htr6 protein_coding protein_coding MGP_LPJ_T0064806.1 MGP_LPJ_G0028043.1 mouse_genomes_project 4 30804495 30828593 + MGP_LPJ_P0064806 Srsf12 protein_coding protein_coding MGP_LPJ_T0064807.1 MGP_LPJ_G0028043.1 mouse_genomes_project 4 30804810 30828603 + MGP_LPJ_P0064807 Srsf12 protein_coding protein_coding MGP_LPJ_T0068939.1 MGP_LPJ_G0028985.1 mouse_genomes_project 4 147078095 147081594 + MGP_LPJ_P0068939 protein_coding protein_coding MGP_LPJ_T0068551.1 MGP_LPJ_G0028889.1 mouse_genomes_project 4 140020768 140059831 - MGP_LPJ_P0068551 Cdc42 protein_coding protein_coding MGP_LPJ_T0068552.1 MGP_LPJ_G0028889.1 mouse_genomes_project 4 140022834 140059810 - MGP_LPJ_P0068552 Cdc42 protein_coding protein_coding MGP_LPJ_T0069240.1 MGP_LPJ_G0029062.1 mouse_genomes_project 4 154873051 155864414 - MGP_LPJ_P0069240 Camta1 protein_coding protein_coding MGP_LPJ_T0069258.1 MGP_LPJ_G0029062.1 mouse_genomes_project 4 155022360 155864621 - MGP_LPJ_P0069258 Camta1 protein_coding protein_coding MGP_LPJ_T0069259.1 MGP_LPJ_G0029062.1 mouse_genomes_project 4 155022361 155864491 - MGP_LPJ_P0069259 Camta1 protein_coding protein_coding MGP_LPJ_T0069260.1 MGP_LPJ_G0029062.1 mouse_genomes_project 4 155022361 155042665 - MGP_LPJ_P0069260 Camta1 protein_coding protein_coding MGP_LPJ_T0069261.1 MGP_LPJ_G0029062.1 mouse_genomes_project 4 155022649 155092411 - MGP_LPJ_P0069261 Camta1 protein_coding protein_coding MGP_LPJ_T0069262.1 MGP_LPJ_G0029062.1 mouse_genomes_project 4 155022649 155071472 - MGP_LPJ_P0069262 Camta1 protein_coding protein_coding MGP_LPJ_T0069263.1 MGP_LPJ_G0029062.1 mouse_genomes_project 4 155048943 155102438 - Camta1 protein_coding processed_transcript MGP_LPJ_T0069264.1 MGP_LPJ_G0029062.1 mouse_genomes_project 4 155049028 155071199 - MGP_LPJ_P0069264 Camta1 protein_coding protein_coding MGP_LPJ_T0069266.1 MGP_LPJ_G0029062.1 mouse_genomes_project 4 155449367 155864395 - Camta1 protein_coding processed_transcript MGP_LPJ_T0069267.1 MGP_LPJ_G0029062.1 mouse_genomes_project 4 155788786 155864449 - Camta1 protein_coding processed_transcript MGP_LPJ_T0069268.1 MGP_LPJ_G0029062.1 mouse_genomes_project 4 155790437 155864414 - MGP_LPJ_P0069268 Camta1 protein_coding unknown_likely_coding MGP_LPJ_T0069269.1 MGP_LPJ_G0029062.1 mouse_genomes_project 4 155790450 155864483 - Camta1 protein_coding processed_transcript MGP_LPJ_T0014371.1 MGP_LPJ_G0012462.1 mouse_genomes_project 4 10288699 10289071 + processed_pseudogene processed_pseudogene MGP_LPJ_T0066699.1 MGP_LPJ_G0028474.1 mouse_genomes_project 4 109709833 109772172 + MGP_LPJ_P0066699 3110021N24Rik protein_coding protein_coding MGP_LPJ_T0014615.1 MGP_LPJ_G0012706.1 mouse_genomes_project 4 94872644 94873221 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014392.1 MGP_LPJ_G0012483.1 mouse_genomes_project 4 15018050 15019060 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004591.1 MGP_LPJ_G0003988.1 mouse_genomes_project 4 144154793 144157261 + 4921514A10Rik antisense antisense MGP_LPJ_T0064746.1 MGP_LPJ_G0028030.1 mouse_genomes_project 4 26244079 26405312 + MGP_LPJ_P0064746 Epha7 protein_coding protein_coding MGP_LPJ_T0064747.1 MGP_LPJ_G0028030.1 mouse_genomes_project 4 26244079 26384088 + MGP_LPJ_P0064747 Epha7 protein_coding protein_coding MGP_LPJ_T0064748.1 MGP_LPJ_G0028030.1 mouse_genomes_project 4 26244100 26404628 + MGP_LPJ_P0064748 Epha7 protein_coding protein_coding MGP_LPJ_T0064749.1 MGP_LPJ_G0028030.1 mouse_genomes_project 4 26244198 26405312 + MGP_LPJ_P0064749 Epha7 protein_coding protein_coding MGP_LPJ_T0064750.1 MGP_LPJ_G0028030.1 mouse_genomes_project 4 26244274 26305683 + Epha7 protein_coding processed_transcript MGP_LPJ_T0064751.1 MGP_LPJ_G0028030.1 mouse_genomes_project 4 26246377 26252812 + Epha7 protein_coding processed_transcript MGP_LPJ_T0064752.1 MGP_LPJ_G0028030.1 mouse_genomes_project 4 26303722 26380541 + Epha7 protein_coding processed_transcript MGP_LPJ_T0064753.1 MGP_LPJ_G0028030.1 mouse_genomes_project 4 26303805 26383375 + Epha7 protein_coding processed_transcript MGP_LPJ_T0099465.1 MGP_LPJ_G0037728.1 mouse_genomes_project 4 13811884 13811990 - Gm23975 snRNA snRNA MGP_LPJ_T0068886.1 MGP_LPJ_G0028968.1 mouse_genomes_project 4 144867089 144898525 - MGP_LPJ_P0068886 Dnajc16 protein_coding protein_coding MGP_LPJ_T0068887.1 MGP_LPJ_G0028968.1 mouse_genomes_project 4 144877884 144882338 - Dnajc16 protein_coding processed_transcript MGP_LPJ_T0068888.1 MGP_LPJ_G0028968.1 mouse_genomes_project 4 144890697 144898565 - MGP_LPJ_P0068888 Dnajc16 protein_coding protein_coding MGP_LPJ_T0102136.1 MGP_LPJ_G0040173.1 mouse_genomes_project 4 73034938 73039054 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0014527.1 MGP_LPJ_G0012618.1 mouse_genomes_project 4 57422305 57422879 - processed_pseudogene processed_pseudogene MGP_LPJ_T0067969.1 MGP_LPJ_G0028760.1 mouse_genomes_project 4 132641757 132642270 - MGP_LPJ_P0067969 Gm10570 protein_coding protein_coding MGP_LPJ_T0014583.1 MGP_LPJ_G0012674.1 mouse_genomes_project 4 83471079 83471342 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099540.1 MGP_LPJ_G0037803.1 mouse_genomes_project 4 148182975 148183141 - Gm25938 snRNA snRNA MGP_LPJ_T0065863.1 MGP_LPJ_G0028289.1 mouse_genomes_project 4 64463019 64707386 + MGP_LPJ_P0065863 Pappa protein_coding protein_coding MGP_LPJ_T0014447.1 MGP_LPJ_G0012538.1 mouse_genomes_project 4 30581478 30581805 - processed_pseudogene processed_pseudogene MGP_LPJ_T0068364.1 MGP_LPJ_G0028844.1 mouse_genomes_project 4 137291978 137300433 - Tmem57 protein_coding processed_transcript MGP_LPJ_T0068365.1 MGP_LPJ_G0028844.1 mouse_genomes_project 4 137291978 137344097 - MGP_LPJ_P0068365 Tmem57 protein_coding protein_coding MGP_LPJ_T0068366.1 MGP_LPJ_G0028844.1 mouse_genomes_project 4 137300413 137343901 - MGP_LPJ_P0068366 Tmem57 protein_coding nonsense_mediated_decay MGP_LPJ_T0068367.1 MGP_LPJ_G0028844.1 mouse_genomes_project 4 137317604 137344015 - MGP_LPJ_P0068367 Tmem57 protein_coding nonsense_mediated_decay MGP_LPJ_T0068368.1 MGP_LPJ_G0028844.1 mouse_genomes_project 4 137326367 137344069 - Tmem57 protein_coding retained_intron MGP_LPJ_T0067990.1 MGP_LPJ_G0028766.1 mouse_genomes_project 4 132982656 133020766 + MGP_LPJ_P0067990 Sdc3 protein_coding protein_coding MGP_LPJ_T0067991.1 MGP_LPJ_G0028766.1 mouse_genomes_project 4 132982823 133011720 + Sdc3 protein_coding retained_intron MGP_LPJ_T0067992.1 MGP_LPJ_G0028766.1 mouse_genomes_project 4 133003936 133013506 + MGP_LPJ_P0067992 Sdc3 protein_coding protein_coding MGP_LPJ_T0067993.1 MGP_LPJ_G0028766.1 mouse_genomes_project 4 133008750 133013506 + MGP_LPJ_P0067993 Sdc3 protein_coding protein_coding MGP_LPJ_T0067994.1 MGP_LPJ_G0028766.1 mouse_genomes_project 4 133011291 133016697 + Sdc3 protein_coding retained_intron MGP_LPJ_T0068875.1 MGP_LPJ_G0028963.1 mouse_genomes_project 4 144722578 144728734 - MGP_LPJ_P0068875 Slc25a34 protein_coding protein_coding MGP_LPJ_T0065283.1 MGP_LPJ_G0028144.1 mouse_genomes_project 4 42222017 42250074 + MGP_LPJ_P0065283 Clta protein_coding protein_coding MGP_LPJ_T0065284.1 MGP_LPJ_G0028144.1 mouse_genomes_project 4 42229865 42250074 + MGP_LPJ_P0065284 Clta protein_coding protein_coding MGP_LPJ_T0065285.1 MGP_LPJ_G0028144.1 mouse_genomes_project 4 42229870 42250073 + MGP_LPJ_P0065285 Clta protein_coding protein_coding MGP_LPJ_T0065286.1 MGP_LPJ_G0028144.1 mouse_genomes_project 4 42229905 42250074 + MGP_LPJ_P0065286 Clta protein_coding protein_coding MGP_LPJ_T0065287.1 MGP_LPJ_G0028144.1 mouse_genomes_project 4 42229905 42250074 + MGP_LPJ_P0065287 Clta protein_coding protein_coding MGP_LPJ_T0065288.1 MGP_LPJ_G0028144.1 mouse_genomes_project 4 42229913 42250074 + MGP_LPJ_P0065288 Clta protein_coding protein_coding MGP_LPJ_T0067467.1 MGP_LPJ_G0028651.1 mouse_genomes_project 4 124967492 125000623 + Pabpc4 protein_coding processed_transcript MGP_LPJ_T0067468.1 MGP_LPJ_G0028651.1 mouse_genomes_project 4 124997610 125011912 + MGP_LPJ_P0067468 Pabpc4 protein_coding unknown_likely_coding MGP_LPJ_T0067469.1 MGP_LPJ_G0028651.1 mouse_genomes_project 4 125008794 125011837 + Pabpc4 protein_coding processed_transcript MGP_LPJ_T0067470.1 MGP_LPJ_G0028651.1 mouse_genomes_project 4 125011010 125015152 + Pabpc4 protein_coding retained_intron MGP_LPJ_T0069191.1 MGP_LPJ_G0029051.1 mouse_genomes_project 4 153826080 153849789 - MGP_LPJ_P0069191 H6pd protein_coding protein_coding MGP_LPJ_T0069192.1 MGP_LPJ_G0029051.1 mouse_genomes_project 4 153826080 153856816 - MGP_LPJ_P0069192 H6pd protein_coding protein_coding MGP_LPJ_T0069193.1 MGP_LPJ_G0029051.1 mouse_genomes_project 4 153842515 153847924 - MGP_LPJ_P0069193 H6pd protein_coding protein_coding MGP_LPJ_T0069194.1 MGP_LPJ_G0029051.1 mouse_genomes_project 4 153846443 153847949 - H6pd protein_coding processed_transcript MGP_LPJ_T0068174.1 MGP_LPJ_G0028802.1 mouse_genomes_project 4 135617124 135627192 - MGP_LPJ_P0068174 Sytl1 protein_coding protein_coding MGP_LPJ_T0068175.1 MGP_LPJ_G0028802.1 mouse_genomes_project 4 135617124 135627166 - MGP_LPJ_P0068175 Sytl1 protein_coding protein_coding MGP_LPJ_T0068176.1 MGP_LPJ_G0028802.1 mouse_genomes_project 4 135617132 135627166 - Sytl1 protein_coding processed_transcript MGP_LPJ_T0068177.1 MGP_LPJ_G0028802.1 mouse_genomes_project 4 135617195 135627131 - Sytl1 protein_coding processed_transcript MGP_LPJ_T0066394.1 MGP_LPJ_G0028416.1 mouse_genomes_project 4 103678733 103703492 + MGP_LPJ_P0066394 Tctex1d1 protein_coding protein_coding MGP_LPJ_T0066395.1 MGP_LPJ_G0028416.1 mouse_genomes_project 4 103684857 103703722 + MGP_LPJ_P0066395 Tctex1d1 protein_coding protein_coding MGP_LPJ_T0066396.1 MGP_LPJ_G0028416.1 mouse_genomes_project 4 103687051 103704742 + MGP_LPJ_P0066396 Tctex1d1 protein_coding protein_coding MGP_LPJ_T0066397.1 MGP_LPJ_G0028416.1 mouse_genomes_project 4 103690304 103691370 + Tctex1d1 protein_coding processed_transcript MGP_LPJ_T0007949.1 MGP_LPJ_G0006498.1 mouse_genomes_project 4 120269398 120270224 - Gm12862 lincRNA lincRNA MGP_LPJ_T0067571.1 MGP_LPJ_G0028680.1 mouse_genomes_project 4 127982714 127991356 + MGP_LPJ_P0067571 Mrps15 protein_coding protein_coding MGP_LPJ_T0067572.1 MGP_LPJ_G0028680.1 mouse_genomes_project 4 127982766 127987755 + Mrps15 protein_coding processed_transcript MGP_LPJ_T0067573.1 MGP_LPJ_G0028680.1 mouse_genomes_project 4 127983023 127986273 + Mrps15 protein_coding processed_transcript MGP_LPJ_T0064986.1 MGP_LPJ_G0028086.1 mouse_genomes_project 4 39544806 39597398 - MGP_LPJ_P0064986 Fam219a protein_coding protein_coding MGP_LPJ_T0064987.1 MGP_LPJ_G0028086.1 mouse_genomes_project 4 39544806 39597426 - MGP_LPJ_P0064987 Fam219a protein_coding protein_coding MGP_LPJ_T0064988.1 MGP_LPJ_G0028086.1 mouse_genomes_project 4 39544806 39597426 - MGP_LPJ_P0064988 Fam219a protein_coding protein_coding MGP_LPJ_T0064989.1 MGP_LPJ_G0028086.1 mouse_genomes_project 4 39548360 39552811 - Fam219a protein_coding processed_transcript MGP_LPJ_T0064990.1 MGP_LPJ_G0028086.1 mouse_genomes_project 4 39552156 39597427 - Fam219a protein_coding processed_transcript MGP_LPJ_T0068545.1 MGP_LPJ_G0028885.1 mouse_genomes_project 4 139575395 139578282 - MGP_LPJ_P0068545 C1qa protein_coding protein_coding MGP_LPJ_T0066326.1 MGP_LPJ_G0028401.1 mouse_genomes_project 4 101346681 101618672 + MGP_LPJ_P0066326 Cachd1 protein_coding protein_coding MGP_LPJ_T0066327.1 MGP_LPJ_G0028401.1 mouse_genomes_project 4 101346681 101596451 + MGP_LPJ_P0066327 Cachd1 protein_coding protein_coding MGP_LPJ_T0066328.1 MGP_LPJ_G0028401.1 mouse_genomes_project 4 101586503 101594975 + Cachd1 protein_coding processed_transcript MGP_LPJ_T0066329.1 MGP_LPJ_G0028401.1 mouse_genomes_project 4 101586602 101595145 + Cachd1 protein_coding processed_transcript MGP_LPJ_T0064634.1 MGP_LPJ_G0027999.1 mouse_genomes_project 4 12931731 12948428 - MGP_LPJ_P0064634 Osgin2 protein_coding protein_coding MGP_LPJ_T0064635.1 MGP_LPJ_G0027999.1 mouse_genomes_project 4 12931837 12936665 - Osgin2 protein_coding processed_transcript MGP_LPJ_T0064636.1 MGP_LPJ_G0027999.1 mouse_genomes_project 4 12936507 12948336 - MGP_LPJ_P0064636 Osgin2 protein_coding protein_coding MGP_LPJ_T0064637.1 MGP_LPJ_G0027999.1 mouse_genomes_project 4 12937085 12948361 - Osgin2 protein_coding processed_transcript MGP_LPJ_T0064638.1 MGP_LPJ_G0027999.1 mouse_genomes_project 4 12939430 12940945 - Osgin2 protein_coding processed_transcript MGP_LPJ_T0065870.1 MGP_LPJ_G0028292.1 mouse_genomes_project 4 66197335 66212552 + MGP_LPJ_P0065870 Tlr4 protein_coding protein_coding MGP_LPJ_T0065871.1 MGP_LPJ_G0028292.1 mouse_genomes_project 4 66197364 66306777 + MGP_LPJ_P0065871 Tlr4 protein_coding protein_coding MGP_LPJ_T0065872.1 MGP_LPJ_G0028292.1 mouse_genomes_project 4 66197370 66209181 + Tlr4 protein_coding processed_transcript MGP_LPJ_T0065873.1 MGP_LPJ_G0028292.1 mouse_genomes_project 4 66197953 66209370 + Tlr4 protein_coding processed_transcript MGP_LPJ_T0068645.1 MGP_LPJ_G0028906.1 mouse_genomes_project 4 141210505 141212942 - MGP_LPJ_P0068645 Fam43b protein_coding protein_coding MGP_LPJ_T0018061.1 MGP_LPJ_G0015502.1 mouse_genomes_project 4 159646695 159673944 - 5830444B04Rik processed_transcript processed_transcript MGP_LPJ_T0018062.1 MGP_LPJ_G0015502.1 mouse_genomes_project 4 159657340 159665662 - 5830444B04Rik processed_transcript processed_transcript MGP_LPJ_T0018063.1 MGP_LPJ_G0015502.1 mouse_genomes_project 4 159657341 159673935 - 5830444B04Rik processed_transcript processed_transcript MGP_LPJ_T0018064.1 MGP_LPJ_G0015502.1 mouse_genomes_project 4 159658549 159665641 - 5830444B04Rik processed_transcript processed_transcript MGP_LPJ_T0004475.1 MGP_LPJ_G0003899.1 mouse_genomes_project 4 43510416 43519656 - Frmpd1os antisense antisense MGP_LPJ_T0010622.1 MGP_LPJ_G0008740.1 mouse_genomes_project 4 88328669 88328755 + Mir491 miRNA miRNA MGP_LPJ_T0067739.1 MGP_LPJ_G0028719.1 mouse_genomes_project 4 130916007 130954148 - MGP_LPJ_P0067739 Zfp362 protein_coding protein_coding MGP_LPJ_T0067740.1 MGP_LPJ_G0028719.1 mouse_genomes_project 4 130916023 130942674 - MGP_LPJ_P0067740 Zfp362 protein_coding protein_coding MGP_LPJ_T0067741.1 MGP_LPJ_G0028719.1 mouse_genomes_project 4 130920003 130954148 - MGP_LPJ_P0067741 Zfp362 protein_coding protein_coding MGP_LPJ_T0067742.1 MGP_LPJ_G0028719.1 mouse_genomes_project 4 130934994 130935766 - Zfp362 protein_coding processed_transcript MGP_LPJ_T0065272.1 MGP_LPJ_G0028138.1 mouse_genomes_project 4 42020094 42022920 - MGP_LPJ_P0065272 Olfr156 protein_coding protein_coding MGP_LPJ_T0004576.1 MGP_LPJ_G0003975.1 mouse_genomes_project 4 137661993 137662858 - Gm16224 antisense antisense MGP_LPJ_T0007916.1 MGP_LPJ_G0006473.1 mouse_genomes_project 4 100126593 100130105 + Gm12690 lincRNA lincRNA MGP_LPJ_T0007930.1 MGP_LPJ_G0006484.1 mouse_genomes_project 4 107095688 107096675 + Gm12730 lincRNA lincRNA MGP_LPJ_T0014729.1 MGP_LPJ_G0012820.1 mouse_genomes_project 4 129450136 129450556 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065169.1 MGP_LPJ_G0028118.1 mouse_genomes_project 4 41614474 41622640 - MGP_LPJ_P0065169 Cd72 protein_coding protein_coding MGP_LPJ_T0065170.1 MGP_LPJ_G0028118.1 mouse_genomes_project 4 41615736 41622576 - MGP_LPJ_P0065170 Cd72 protein_coding protein_coding MGP_LPJ_T0065171.1 MGP_LPJ_G0028118.1 mouse_genomes_project 4 41615736 41622597 - MGP_LPJ_P0065171 Cd72 protein_coding protein_coding MGP_LPJ_T0065172.1 MGP_LPJ_G0028118.1 mouse_genomes_project 4 41615736 41622641 - MGP_LPJ_P0065172 Cd72 protein_coding protein_coding MGP_LPJ_T0065173.1 MGP_LPJ_G0028118.1 mouse_genomes_project 4 41615747 41622639 - MGP_LPJ_P0065173 Cd72 protein_coding protein_coding MGP_LPJ_T0065174.1 MGP_LPJ_G0028118.1 mouse_genomes_project 4 41616042 41617955 - Cd72 protein_coding retained_intron MGP_LPJ_T0065175.1 MGP_LPJ_G0028118.1 mouse_genomes_project 4 41617857 41620385 - Cd72 protein_coding retained_intron MGP_LPJ_T0065176.1 MGP_LPJ_G0028118.1 mouse_genomes_project 4 41620322 41622625 - Cd72 protein_coding retained_intron MGP_LPJ_T0065177.1 MGP_LPJ_G0028118.1 mouse_genomes_project 4 41620333 41622336 - Cd72 protein_coding processed_transcript MGP_LPJ_T0065178.1 MGP_LPJ_G0028118.1 mouse_genomes_project 4 41620613 41622639 - Cd72 protein_coding processed_transcript MGP_LPJ_T0011589.1 MGP_LPJ_G0009707.1 mouse_genomes_project 4 98743549 98743663 + Gm24203 misc_RNA misc_RNA MGP_LPJ_T0067918.1 MGP_LPJ_G0028752.1 mouse_genomes_project 4 132200510 132256322 + MGP_LPJ_P0067918 Spocd1 protein_coding unknown_likely_coding MGP_LPJ_T0067919.1 MGP_LPJ_G0028752.1 mouse_genomes_project 4 132244017 132252908 + MGP_LPJ_P0067919 Spocd1 protein_coding protein_coding MGP_LPJ_T0067920.1 MGP_LPJ_G0028752.1 mouse_genomes_project 4 132244191 132256444 + MGP_LPJ_P0067920 Spocd1 protein_coding protein_coding MGP_LPJ_T0068025.1 MGP_LPJ_G0028771.1 mouse_genomes_project 4 134144506 134173155 + MGP_LPJ_P0068025 Srsf4 protein_coding protein_coding MGP_LPJ_T0068026.1 MGP_LPJ_G0028771.1 mouse_genomes_project 4 134144705 134163033 + MGP_LPJ_P0068026 Srsf4 protein_coding nonsense_mediated_decay MGP_LPJ_T0068027.1 MGP_LPJ_G0028771.1 mouse_genomes_project 4 134155191 134169278 + MGP_LPJ_P0068027 Srsf4 protein_coding nonsense_mediated_decay MGP_LPJ_T0068028.1 MGP_LPJ_G0028771.1 mouse_genomes_project 4 134156104 134173155 + Srsf4 protein_coding retained_intron MGP_LPJ_T0068029.1 MGP_LPJ_G0028771.1 mouse_genomes_project 4 134156320 134173156 + MGP_LPJ_P0068029 Srsf4 protein_coding unknown_likely_coding MGP_LPJ_T0011831.1 MGP_LPJ_G0009939.1 mouse_genomes_project 4 119591765 119594551 + MGP_LPJ_P0011831 Hyi polymorphic_pseudogene polymorphic_pseudogene MGP_LPJ_T0011832.1 MGP_LPJ_G0009939.1 mouse_genomes_project 4 119591774 119593095 + Hyi polymorphic_pseudogene retained_intron MGP_LPJ_T0011833.1 MGP_LPJ_G0009939.1 mouse_genomes_project 4 119591774 119594551 + MGP_LPJ_P0011833 Hyi polymorphic_pseudogene nonsense_mediated_decay MGP_LPJ_T0011834.1 MGP_LPJ_G0009939.1 mouse_genomes_project 4 119591789 119594551 + MGP_LPJ_P0011834 Hyi polymorphic_pseudogene protein_coding MGP_LPJ_T0011835.1 MGP_LPJ_G0009939.1 mouse_genomes_project 4 119593122 119594302 + Hyi polymorphic_pseudogene retained_intron MGP_LPJ_T0067210.1 MGP_LPJ_G0009939.1 mouse_genomes_project 4 119591808 119594558 + MGP_LPJ_P0067210 Hyi polymorphic_pseudogene unknown_likely_coding MGP_LPJ_T0065942.1 MGP_LPJ_G0028311.1 mouse_genomes_project 4 81176537 81335333 - MGP_LPJ_P0065942 Mpdz protein_coding protein_coding MGP_LPJ_T0065943.1 MGP_LPJ_G0028311.1 mouse_genomes_project 4 81176542 81236391 - MGP_LPJ_P0065943 Mpdz protein_coding protein_coding MGP_LPJ_T0065944.1 MGP_LPJ_G0028311.1 mouse_genomes_project 4 81176542 81335335 - MGP_LPJ_P0065944 Mpdz protein_coding protein_coding MGP_LPJ_T0065945.1 MGP_LPJ_G0028311.1 mouse_genomes_project 4 81177268 81183531 - Mpdz protein_coding retained_intron MGP_LPJ_T0065946.1 MGP_LPJ_G0028311.1 mouse_genomes_project 4 81177371 81196051 - MGP_LPJ_P0065946 Mpdz protein_coding protein_coding MGP_LPJ_T0065947.1 MGP_LPJ_G0028311.1 mouse_genomes_project 4 81177653 81335231 - MGP_LPJ_P0065947 Mpdz protein_coding unknown_likely_coding MGP_LPJ_T0065948.1 MGP_LPJ_G0028311.1 mouse_genomes_project 4 81180985 81182693 - Mpdz protein_coding retained_intron MGP_LPJ_T0065949.1 MGP_LPJ_G0028311.1 mouse_genomes_project 4 81181369 81193079 - MGP_LPJ_P0065949 Mpdz protein_coding protein_coding MGP_LPJ_T0065950.1 MGP_LPJ_G0028311.1 mouse_genomes_project 4 81182570 81188543 - Mpdz protein_coding retained_intron MGP_LPJ_T0065951.1 MGP_LPJ_G0028311.1 mouse_genomes_project 4 81190364 81193296 - Mpdz protein_coding retained_intron MGP_LPJ_T0065952.1 MGP_LPJ_G0028311.1 mouse_genomes_project 4 81193025 81193641 - Mpdz protein_coding retained_intron MGP_LPJ_T0065953.1 MGP_LPJ_G0028311.1 mouse_genomes_project 4 81207157 81220822 - MGP_LPJ_P0065953 Mpdz protein_coding protein_coding MGP_LPJ_T0065954.1 MGP_LPJ_G0028311.1 mouse_genomes_project 4 81220644 81233560 - MGP_LPJ_P0065954 Mpdz protein_coding protein_coding MGP_LPJ_T0065955.1 MGP_LPJ_G0028311.1 mouse_genomes_project 4 81220666 81236349 - MGP_LPJ_P0065955 Mpdz protein_coding protein_coding MGP_LPJ_T0065956.1 MGP_LPJ_G0028311.1 mouse_genomes_project 4 81246461 81261206 - MGP_LPJ_P0065956 Mpdz protein_coding protein_coding MGP_LPJ_T0065957.1 MGP_LPJ_G0028311.1 mouse_genomes_project 4 81304548 81335343 - Mpdz protein_coding retained_intron MGP_LPJ_T0099474.1 MGP_LPJ_G0037737.1 mouse_genomes_project 4 37786078 37786160 + Gm22850 snRNA snRNA MGP_LPJ_T0014720.1 MGP_LPJ_G0012811.1 mouse_genomes_project 4 128494837 128495256 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014757.1 MGP_LPJ_G0012848.1 mouse_genomes_project 4 142042584 142043193 + processed_pseudogene processed_pseudogene MGP_LPJ_T0067239.1 MGP_LPJ_G0028584.1 mouse_genomes_project 4 119764448 119767306 + MGP_LPJ_P0067239 2610528J11Rik protein_coding protein_coding MGP_LPJ_T0067240.1 MGP_LPJ_G0028584.1 mouse_genomes_project 4 119764692 119767679 + MGP_LPJ_P0067240 2610528J11Rik protein_coding protein_coding MGP_LPJ_T0066853.1 MGP_LPJ_G0028505.1 mouse_genomes_project 4 115888098 115888965 - MGP_LPJ_P0066853 Foxe3 protein_coding protein_coding MGP_LPJ_T0100788.1 MGP_LPJ_G0039051.1 mouse_genomes_project 4 110587642 110587773 + Gm22497 snoRNA snoRNA MGP_LPJ_T0065231.1 MGP_LPJ_G0028127.1 mouse_genomes_project 4 41757228 41766018 + MGP_LPJ_P0065231 Rgp1 protein_coding protein_coding MGP_LPJ_T0065232.1 MGP_LPJ_G0028127.1 mouse_genomes_project 4 41757248 41766016 + MGP_LPJ_P0065232 Rgp1 protein_coding protein_coding MGP_LPJ_T0065233.1 MGP_LPJ_G0028127.1 mouse_genomes_project 4 41757467 41759437 + Rgp1 protein_coding processed_transcript MGP_LPJ_T0065234.1 MGP_LPJ_G0028127.1 mouse_genomes_project 4 41757471 41761644 + MGP_LPJ_P0065234 Rgp1 protein_coding protein_coding MGP_LPJ_T0065235.1 MGP_LPJ_G0028127.1 mouse_genomes_project 4 41757496 41758136 + Rgp1 protein_coding retained_intron MGP_LPJ_T0065236.1 MGP_LPJ_G0028127.1 mouse_genomes_project 4 41758250 41759433 + Rgp1 protein_coding retained_intron MGP_LPJ_T0065237.1 MGP_LPJ_G0028127.1 mouse_genomes_project 4 41759727 41760234 + Rgp1 protein_coding retained_intron MGP_LPJ_T0014690.1 MGP_LPJ_G0012781.1 mouse_genomes_project 4 119678351 119678559 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014611.1 MGP_LPJ_G0012702.1 mouse_genomes_project 4 93584603 93585493 - processed_pseudogene processed_pseudogene MGP_LPJ_T0066324.1 MGP_LPJ_G0028400.1 mouse_genomes_project 4 101055035 101125197 + MGP_LPJ_P0066324 Ube2u protein_coding protein_coding MGP_LPJ_T0066325.1 MGP_LPJ_G0028400.1 mouse_genomes_project 4 101055053 101125195 + MGP_LPJ_P0066325 Ube2u protein_coding protein_coding MGP_LPJ_T0014467.1 MGP_LPJ_G0012558.1 mouse_genomes_project 4 37696406 37697201 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014645.1 MGP_LPJ_G0012736.1 mouse_genomes_project 4 106121706 106122131 - processed_pseudogene processed_pseudogene MGP_LPJ_T0068297.1 MGP_LPJ_G0028827.1 mouse_genomes_project 4 136658530 136668859 - MGP_LPJ_P0068297 Cnksr1 protein_coding protein_coding MGP_LPJ_T0068298.1 MGP_LPJ_G0028827.1 mouse_genomes_project 4 136658538 136668799 - Cnksr1 protein_coding processed_transcript MGP_LPJ_T0068299.1 MGP_LPJ_G0028827.1 mouse_genomes_project 4 136659843 136660918 - Cnksr1 protein_coding processed_transcript MGP_LPJ_T0068300.1 MGP_LPJ_G0028827.1 mouse_genomes_project 4 136660907 136663658 - Cnksr1 protein_coding processed_transcript MGP_LPJ_T0068301.1 MGP_LPJ_G0028827.1 mouse_genomes_project 4 136662969 136666445 - Cnksr1 protein_coding processed_transcript MGP_LPJ_T0102138.1 MGP_LPJ_G0040175.1 mouse_genomes_project 4 88806439 88808127 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0099529.1 MGP_LPJ_G0037792.1 mouse_genomes_project 4 134751262 134751356 + Gm23055 snRNA snRNA MGP_LPJ_T0099502.1 MGP_LPJ_G0037765.1 mouse_genomes_project 4 101689218 101689281 - Gm22100 snRNA snRNA MGP_LPJ_T0014715.1 MGP_LPJ_G0012806.1 mouse_genomes_project 4 125684971 125685519 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014601.1 MGP_LPJ_G0012692.1 mouse_genomes_project 4 90621474 90622466 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100739.1 MGP_LPJ_G0039002.1 mouse_genomes_project 4 19549565 19549698 + Gm24607 snoRNA snoRNA MGP_LPJ_T0069748.1 MGP_LPJ_G0029157.1 mouse_genomes_project 4 160582444 160591602 - MGP_LPJ_P0069748 Samd11 protein_coding protein_coding MGP_LPJ_T0069749.1 MGP_LPJ_G0029157.1 mouse_genomes_project 4 160583204 160590775 - MGP_LPJ_P0069749 Samd11 protein_coding unknown_likely_coding MGP_LPJ_T0064811.1 MGP_LPJ_G0028045.1 mouse_genomes_project 4 30908856 31122525 + MGP_LPJ_P0064811 Rngtt protein_coding protein_coding MGP_LPJ_T0064812.1 MGP_LPJ_G0028045.1 mouse_genomes_project 4 30908873 31120825 + MGP_LPJ_P0064812 Rngtt protein_coding protein_coding MGP_LPJ_T0064813.1 MGP_LPJ_G0028045.1 mouse_genomes_project 4 30921874 30925677 + Rngtt protein_coding processed_transcript MGP_LPJ_T0064814.1 MGP_LPJ_G0028045.1 mouse_genomes_project 4 30924536 30940346 + Rngtt protein_coding processed_transcript MGP_LPJ_T0064815.1 MGP_LPJ_G0028045.1 mouse_genomes_project 4 30931472 30963847 + Rngtt protein_coding processed_transcript MGP_LPJ_T0014360.1 MGP_LPJ_G0012451.1 mouse_genomes_project 4 6615861 6616524 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010676.1 MGP_LPJ_G0008794.1 mouse_genomes_project 4 157113812 157113907 - Gm25779 miRNA miRNA MGP_LPJ_T0001453.1 MGP_LPJ_G0001371.1 mouse_genomes_project 4 134386468 134391505 - TEC TEC MGP_LPJ_T0069711.1 MGP_LPJ_G0029147.1 mouse_genomes_project 4 160335890 160338618 + MGP_LPJ_P0069711 Tnfrsf18 protein_coding protein_coding MGP_LPJ_T0069712.1 MGP_LPJ_G0029147.1 mouse_genomes_project 4 160336058 160338614 + Tnfrsf18 protein_coding retained_intron MGP_LPJ_T0069713.1 MGP_LPJ_G0029147.1 mouse_genomes_project 4 160336068 160338614 + MGP_LPJ_P0069713 Tnfrsf18 protein_coding protein_coding MGP_LPJ_T0069714.1 MGP_LPJ_G0029147.1 mouse_genomes_project 4 160336068 160338614 + MGP_LPJ_P0069714 Tnfrsf18 protein_coding protein_coding MGP_LPJ_T0069715.1 MGP_LPJ_G0029147.1 mouse_genomes_project 4 160336104 160338098 + Tnfrsf18 protein_coding processed_transcript MGP_LPJ_T0069716.1 MGP_LPJ_G0029147.1 mouse_genomes_project 4 160338094 160338618 + Tnfrsf18 protein_coding processed_transcript MGP_LPJ_T0014667.1 MGP_LPJ_G0012758.1 mouse_genomes_project 4 112438328 112439376 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004622.1 MGP_LPJ_G0004010.1 mouse_genomes_project 4 153564267 153565287 + antisense antisense MGP_LPJ_T0004623.1 MGP_LPJ_G0004010.1 mouse_genomes_project 4 153564267 153565162 + antisense antisense MGP_LPJ_T0068631.1 MGP_LPJ_G0028901.1 mouse_genomes_project 4 141053485 141064415 + MGP_LPJ_P0068631 Sh2d5 protein_coding protein_coding MGP_LPJ_T0068632.1 MGP_LPJ_G0028901.1 mouse_genomes_project 4 141053495 141060362 + MGP_LPJ_P0068632 Sh2d5 protein_coding protein_coding MGP_LPJ_T0068633.1 MGP_LPJ_G0028901.1 mouse_genomes_project 4 141053505 141058773 + Sh2d5 protein_coding processed_transcript MGP_LPJ_T0068635.1 MGP_LPJ_G0028901.1 mouse_genomes_project 4 141053546 141064415 + MGP_LPJ_P0068635 Sh2d5 protein_coding protein_coding MGP_LPJ_T0068636.1 MGP_LPJ_G0028901.1 mouse_genomes_project 4 141059817 141062194 + Sh2d5 protein_coding retained_intron MGP_LPJ_T0010629.1 MGP_LPJ_G0008747.1 mouse_genomes_project 4 101943307 101943390 - Mir101a miRNA miRNA MGP_LPJ_T0065569.1 MGP_LPJ_G0028208.1 mouse_genomes_project 4 51572195 51573254 - MGP_LPJ_P0065569 Olfr273 protein_coding protein_coding MGP_LPJ_T0065570.1 MGP_LPJ_G0028208.1 mouse_genomes_project 4 51572239 51575148 - MGP_LPJ_P0065570 Olfr273 protein_coding protein_coding MGP_LPJ_T0099525.1 MGP_LPJ_G0037788.1 mouse_genomes_project 4 129319400 129319503 - Gm22221 snRNA snRNA MGP_LPJ_T0066363.1 MGP_LPJ_G0028410.1 mouse_genomes_project 4 102526568 102544316 - MGP_LPJ_P0066363 C130073F10Rik protein_coding protein_coding MGP_LPJ_T0017995.1 MGP_LPJ_G0015461.1 mouse_genomes_project 4 44903381 44907265 + Gm16731 processed_transcript processed_transcript MGP_LPJ_T0014544.1 MGP_LPJ_G0012635.1 mouse_genomes_project 4 68770075 68773568 - processed_pseudogene processed_pseudogene MGP_LPJ_T0064687.1 MGP_LPJ_G0028017.1 mouse_genomes_project 4 18946423 18975675 + MGP_LPJ_P0064687 Pnisr protein_coding protein_coding MGP_LPJ_T0064688.1 MGP_LPJ_G0028017.1 mouse_genomes_project 4 18946888 18972955 + MGP_LPJ_P0064688 Pnisr protein_coding nonsense_mediated_decay MGP_LPJ_T0064689.1 MGP_LPJ_G0028017.1 mouse_genomes_project 4 18946895 18975667 + MGP_LPJ_P0064689 Pnisr protein_coding protein_coding MGP_LPJ_T0064690.1 MGP_LPJ_G0028017.1 mouse_genomes_project 4 18946898 18959473 + Pnisr protein_coding processed_transcript MGP_LPJ_T0064691.1 MGP_LPJ_G0028017.1 mouse_genomes_project 4 18946898 18970542 + MGP_LPJ_P0064691 Pnisr protein_coding protein_coding MGP_LPJ_T0064692.1 MGP_LPJ_G0028017.1 mouse_genomes_project 4 18946904 18956995 + Pnisr protein_coding processed_transcript MGP_LPJ_T0064693.1 MGP_LPJ_G0028017.1 mouse_genomes_project 4 18946913 18953767 + Pnisr protein_coding processed_transcript MGP_LPJ_T0064694.1 MGP_LPJ_G0028017.1 mouse_genomes_project 4 18946921 18961128 + Pnisr protein_coding processed_transcript MGP_LPJ_T0064695.1 MGP_LPJ_G0028017.1 mouse_genomes_project 4 18952910 18958207 + Pnisr protein_coding processed_transcript MGP_LPJ_T0064696.1 MGP_LPJ_G0028017.1 mouse_genomes_project 4 18957730 18961048 + Pnisr protein_coding processed_transcript MGP_LPJ_T0064697.1 MGP_LPJ_G0028017.1 mouse_genomes_project 4 18958003 18959891 + Pnisr protein_coding processed_transcript MGP_LPJ_T0064698.1 MGP_LPJ_G0028017.1 mouse_genomes_project 4 18970233 18973064 + Pnisr protein_coding processed_transcript MGP_LPJ_T0064699.1 MGP_LPJ_G0028017.1 mouse_genomes_project 4 18973403 18974458 + Pnisr protein_coding processed_transcript MGP_LPJ_T0065355.1 MGP_LPJ_G0028151.1 mouse_genomes_project 4 43257858 43278389 - MGP_LPJ_P0065355 Zbtb5 protein_coding protein_coding MGP_LPJ_T0065356.1 MGP_LPJ_G0028151.1 mouse_genomes_project 4 43261036 43278122 - MGP_LPJ_P0065356 Zbtb5 protein_coding protein_coding MGP_LPJ_T0098256.1 MGP_LPJ_G0036537.1 mouse_genomes_project 4 47268498 47268610 - Gm24573 rRNA rRNA MGP_LPJ_T0064500.1 MGP_LPJ_G0027968.1 mouse_genomes_project 4 6105012 6131377 - Asph protein_coding processed_transcript MGP_LPJ_T0064501.1 MGP_LPJ_G0027968.1 mouse_genomes_project 4 6106022 6319534 - MGP_LPJ_P0064501 Asph protein_coding protein_coding MGP_LPJ_T0064502.1 MGP_LPJ_G0027968.1 mouse_genomes_project 4 6106022 6319716 - MGP_LPJ_P0064502 Asph protein_coding protein_coding MGP_LPJ_T0064503.1 MGP_LPJ_G0027968.1 mouse_genomes_project 4 6106022 6319534 - MGP_LPJ_P0064503 Asph protein_coding protein_coding MGP_LPJ_T0064504.1 MGP_LPJ_G0027968.1 mouse_genomes_project 4 6230048 6243619 - Asph protein_coding processed_transcript MGP_LPJ_T0064505.1 MGP_LPJ_G0027968.1 mouse_genomes_project 4 6230449 6293340 - MGP_LPJ_P0064505 Asph protein_coding protein_coding MGP_LPJ_T0064506.1 MGP_LPJ_G0027968.1 mouse_genomes_project 4 6230449 6293340 - MGP_LPJ_P0064506 Asph protein_coding protein_coding MGP_LPJ_T0064507.1 MGP_LPJ_G0027968.1 mouse_genomes_project 4 6230449 6319534 - MGP_LPJ_P0064507 Asph protein_coding protein_coding MGP_LPJ_T0064508.1 MGP_LPJ_G0027968.1 mouse_genomes_project 4 6230449 6293340 - MGP_LPJ_P0064508 Asph protein_coding protein_coding MGP_LPJ_T0064509.1 MGP_LPJ_G0027968.1 mouse_genomes_project 4 6230449 6319534 - MGP_LPJ_P0064509 Asph protein_coding protein_coding MGP_LPJ_T0064510.1 MGP_LPJ_G0027968.1 mouse_genomes_project 4 6251247 6288887 - Asph protein_coding processed_transcript MGP_LPJ_T0064511.1 MGP_LPJ_G0027968.1 mouse_genomes_project 4 6254542 6293340 - MGP_LPJ_P0064511 Asph protein_coding protein_coding MGP_LPJ_T0064512.1 MGP_LPJ_G0027968.1 mouse_genomes_project 4 6257540 6319534 - MGP_LPJ_P0064512 Asph protein_coding protein_coding MGP_LPJ_T0064513.1 MGP_LPJ_G0027968.1 mouse_genomes_project 4 6270533 6293340 - MGP_LPJ_P0064513 Asph protein_coding protein_coding MGP_LPJ_T0064514.1 MGP_LPJ_G0027968.1 mouse_genomes_project 4 6271320 6319534 - MGP_LPJ_P0064514 Asph protein_coding protein_coding MGP_LPJ_T0064515.1 MGP_LPJ_G0027968.1 mouse_genomes_project 4 6278648 6319534 - MGP_LPJ_P0064515 Asph protein_coding protein_coding MGP_LPJ_T0064516.1 MGP_LPJ_G0027968.1 mouse_genomes_project 4 6280174 6319534 - MGP_LPJ_P0064516 Asph protein_coding protein_coding MGP_LPJ_T0064517.1 MGP_LPJ_G0027968.1 mouse_genomes_project 4 6280553 6319693 - MGP_LPJ_P0064517 Asph protein_coding protein_coding MGP_LPJ_T0064518.1 MGP_LPJ_G0027968.1 mouse_genomes_project 4 6282743 6293340 - Asph protein_coding processed_transcript MGP_LPJ_T0064519.1 MGP_LPJ_G0027968.1 mouse_genomes_project 4 6318684 6319458 - Asph protein_coding processed_transcript MGP_LPJ_T0068902.1 MGP_LPJ_G0028972.1 mouse_genomes_project 4 144965512 144982275 - MGP_LPJ_P0068902 Efhd2 protein_coding protein_coding MGP_LPJ_T0067898.1 MGP_LPJ_G0028748.1 mouse_genomes_project 4 131888636 131919817 - MGP_LPJ_P0067898 Kpna6 protein_coding protein_coding MGP_LPJ_T0067899.1 MGP_LPJ_G0028748.1 mouse_genomes_project 4 131898339 131899620 - Kpna6 protein_coding retained_intron MGP_LPJ_T0067900.1 MGP_LPJ_G0028748.1 mouse_genomes_project 4 131898987 131901425 - Kpna6 protein_coding retained_intron MGP_LPJ_T0067901.1 MGP_LPJ_G0028748.1 mouse_genomes_project 4 131902145 131919578 - MGP_LPJ_P0067901 Kpna6 protein_coding protein_coding MGP_LPJ_T0067902.1 MGP_LPJ_G0028748.1 mouse_genomes_project 4 131905894 131919817 - Kpna6 protein_coding retained_intron MGP_LPJ_T0004479.1 MGP_LPJ_G0003902.1 mouse_genomes_project 4 51108203 51116713 - Smc2os antisense antisense MGP_LPJ_T0065652.1 MGP_LPJ_G0028231.1 mouse_genomes_project 4 56084349 56164466 - MGP_LPJ_P0065652 protein_coding unknown_likely_coding MGP_LPJ_T0065653.1 MGP_LPJ_G0028231.1 mouse_genomes_project 4 56108297 56112006 - protein_coding processed_transcript MGP_LPJ_T0065654.1 MGP_LPJ_G0028231.1 mouse_genomes_project 4 56135275 56192867 - MGP_LPJ_P0065654 protein_coding protein_coding MGP_LPJ_T0065655.1 MGP_LPJ_G0028231.1 mouse_genomes_project 4 56145136 56193407 - protein_coding processed_transcript MGP_LPJ_T0065656.1 MGP_LPJ_G0028231.1 mouse_genomes_project 4 56155273 56193999 - MGP_LPJ_P0065656 protein_coding protein_coding MGP_LPJ_T0065657.1 MGP_LPJ_G0028231.1 mouse_genomes_project 4 56160279 56193248 - MGP_LPJ_P0065657 protein_coding protein_coding MGP_LPJ_T0004556.1 MGP_LPJ_G0003959.1 mouse_genomes_project 4 126748188 126752081 - 1700125G02Rik antisense antisense MGP_LPJ_T0004601.1 MGP_LPJ_G0003996.1 mouse_genomes_project 4 145216913 145221153 + Tmem51os1 antisense antisense MGP_LPJ_T0004602.1 MGP_LPJ_G0003996.1 mouse_genomes_project 4 145217242 145221209 + Tmem51os1 antisense antisense MGP_LPJ_T0004603.1 MGP_LPJ_G0003996.1 mouse_genomes_project 4 145217284 145221146 + Tmem51os1 antisense antisense MGP_LPJ_T0004604.1 MGP_LPJ_G0003996.1 mouse_genomes_project 4 145217800 145221187 + Tmem51os1 antisense antisense MGP_LPJ_T0065566.1 MGP_LPJ_G0028206.1 mouse_genomes_project 4 51301197 51318060 + MGP_LPJ_P0065566 Toporsl protein_coding protein_coding MGP_LPJ_T0065567.1 MGP_LPJ_G0028206.1 mouse_genomes_project 4 51312851 51318057 + MGP_LPJ_P0065567 Toporsl protein_coding protein_coding MGP_LPJ_T0068592.1 MGP_LPJ_G0028897.1 mouse_genomes_project 4 140493952 140552411 - MGP_LPJ_P0068592 Alpl protein_coding protein_coding MGP_LPJ_T0068593.1 MGP_LPJ_G0028897.1 mouse_genomes_project 4 140498639 140499367 - Alpl protein_coding processed_transcript MGP_LPJ_T0068594.1 MGP_LPJ_G0028897.1 mouse_genomes_project 4 140504771 140520132 - MGP_LPJ_P0068594 Alpl protein_coding protein_coding MGP_LPJ_T0068595.1 MGP_LPJ_G0028897.1 mouse_genomes_project 4 140506086 140538478 - MGP_LPJ_P0068595 Alpl protein_coding protein_coding MGP_LPJ_T0068596.1 MGP_LPJ_G0028897.1 mouse_genomes_project 4 140507305 140541658 - MGP_LPJ_P0068596 Alpl protein_coding protein_coding MGP_LPJ_T0068597.1 MGP_LPJ_G0028897.1 mouse_genomes_project 4 140507849 140552257 - Alpl protein_coding processed_transcript MGP_LPJ_T0068598.1 MGP_LPJ_G0028897.1 mouse_genomes_project 4 140510895 140523272 - Alpl protein_coding processed_transcript MGP_LPJ_T0068599.1 MGP_LPJ_G0028897.1 mouse_genomes_project 4 140510895 140523477 - Alpl protein_coding processed_transcript MGP_LPJ_T0102163.1 MGP_LPJ_G0040200.1 mouse_genomes_project 4 124310914 124330125 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0014505.1 MGP_LPJ_G0012596.1 mouse_genomes_project 4 51121479 51121737 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005646.1 MGP_LPJ_G0004757.1 mouse_genomes_project 4 108692151 108701052 - Lrp8os3 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_LPJ_T0068166.1 MGP_LPJ_G0028800.1 mouse_genomes_project 4 135574996 135582540 + Cd164l2 protein_coding processed_transcript MGP_LPJ_T0068167.1 MGP_LPJ_G0028800.1 mouse_genomes_project 4 135581580 135585309 + MGP_LPJ_P0068167 Cd164l2 protein_coding protein_coding MGP_LPJ_T0068168.1 MGP_LPJ_G0028800.1 mouse_genomes_project 4 135582217 135585309 + Cd164l2 protein_coding processed_transcript MGP_LPJ_T0068169.1 MGP_LPJ_G0028800.1 mouse_genomes_project 4 135582303 135584996 + Cd164l2 protein_coding retained_intron MGP_LPJ_T0001464.1 MGP_LPJ_G0001381.1 mouse_genomes_project 4 160324677 160328794 - TEC TEC MGP_LPJ_T0004571.1 MGP_LPJ_G0003971.1 mouse_genomes_project 4 134854222 134855137 + Gm12999 antisense antisense MGP_LPJ_T0064457.1 MGP_LPJ_G0027960.1 mouse_genomes_project 4 2826745 2836860 - MGP_LPJ_P0064457 Cyp7a1 protein_coding protein_coding MGP_LPJ_T0064458.1 MGP_LPJ_G0027960.1 mouse_genomes_project 4 2834099 2836862 - Cyp7a1 protein_coding processed_transcript MGP_LPJ_T0099489.1 MGP_LPJ_G0037752.1 mouse_genomes_project 4 67631133 67631304 + Gm23738 snRNA snRNA MGP_LPJ_T0007840.1 MGP_LPJ_G0006409.1 mouse_genomes_project 4 34732451 34772866 + Gm12371 lincRNA lincRNA MGP_LPJ_T0010658.1 MGP_LPJ_G0008776.1 mouse_genomes_project 4 139270827 139270886 - Gm22180 miRNA miRNA MGP_LPJ_T0066053.1 MGP_LPJ_G0028325.1 mouse_genomes_project 4 86673328 86674946 + MGP_LPJ_P0066053 Rraga protein_coding protein_coding MGP_LPJ_T0102149.1 MGP_LPJ_G0040186.1 mouse_genomes_project 4 113343065 113344133 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0014463.1 MGP_LPJ_G0012554.1 mouse_genomes_project 4 35878507 35878936 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004480.1 MGP_LPJ_G0003903.1 mouse_genomes_project 4 51973268 51978188 + 4930522O17Rik antisense antisense MGP_LPJ_T0068882.1 MGP_LPJ_G0028965.1 mouse_genomes_project 4 144785396 144830984 - MGP_LPJ_P0068882 protein_coding protein_coding MGP_LPJ_T0068883.1 MGP_LPJ_G0028965.1 mouse_genomes_project 4 144791607 144830984 - MGP_LPJ_P0068883 protein_coding protein_coding MGP_LPJ_T0007903.1 MGP_LPJ_G0006462.1 mouse_genomes_project 4 89464607 89504997 - Gm12606 lincRNA lincRNA MGP_LPJ_T0007904.1 MGP_LPJ_G0006462.1 mouse_genomes_project 4 89464625 89505818 - Gm12606 lincRNA lincRNA MGP_LPJ_T0069343.1 MGP_LPJ_G0029080.1 mouse_genomes_project 4 156322921 156324094 - MGP_LPJ_P0069343 Hes3 protein_coding protein_coding MGP_LPJ_T0007917.1 MGP_LPJ_G0006474.1 mouse_genomes_project 4 100218636 100220013 - Gm12688 lincRNA lincRNA MGP_LPJ_T0099524.1 MGP_LPJ_G0037787.1 mouse_genomes_project 4 129130994 129131100 - Gm25600 snRNA snRNA MGP_LPJ_T0064803.1 MGP_LPJ_G0028041.1 mouse_genomes_project 4 30722563 30755005 + MGP_LPJ_P0064803 Gabrr1 protein_coding protein_coding MGP_LPJ_T0068937.1 MGP_LPJ_G0028983.1 mouse_genomes_project 4 146988737 146998501 + MGP_LPJ_P0068937 protein_coding protein_coding MGP_LPJ_T0064647.1 MGP_LPJ_G0028003.1 mouse_genomes_project 4 16329967 16567901 + MGP_LPJ_P0064647 Cngb3 protein_coding protein_coding MGP_LPJ_T0004621.1 MGP_LPJ_G0004009.1 mouse_genomes_project 4 153341500 153343671 - Gm13066 antisense antisense MGP_LPJ_T0069649.1 MGP_LPJ_G0029135.1 mouse_genomes_project 4 160137899 160140347 + MGP_LPJ_P0069649 Mxra8 protein_coding protein_coding MGP_LPJ_T0069650.1 MGP_LPJ_G0029135.1 mouse_genomes_project 4 160137945 160142236 + MGP_LPJ_P0069650 Mxra8 protein_coding protein_coding MGP_LPJ_T0069651.1 MGP_LPJ_G0029135.1 mouse_genomes_project 4 160138049 160139498 + Mxra8 protein_coding retained_intron MGP_LPJ_T0069652.1 MGP_LPJ_G0029135.1 mouse_genomes_project 4 160140491 160141102 + Mxra8 protein_coding retained_intron MGP_LPJ_T0069653.1 MGP_LPJ_G0029135.1 mouse_genomes_project 4 160140578 160141602 + Mxra8 protein_coding retained_intron MGP_LPJ_T0069654.1 MGP_LPJ_G0029135.1 mouse_genomes_project 4 160140599 160141719 + Mxra8 protein_coding retained_intron MGP_LPJ_T0069655.1 MGP_LPJ_G0029135.1 mouse_genomes_project 4 160141050 160141913 + Mxra8 protein_coding processed_transcript MGP_LPJ_T0014717.1 MGP_LPJ_G0012808.1 mouse_genomes_project 4 126567839 126568478 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014774.1 MGP_LPJ_G0012865.1 mouse_genomes_project 4 151521457 151521790 + processed_pseudogene processed_pseudogene MGP_LPJ_T0068740.1 MGP_LPJ_G0028932.1 mouse_genomes_project 4 142582327 142598856 + MGP_LPJ_P0068740 Tas1r2 protein_coding protein_coding MGP_LPJ_T0068741.1 MGP_LPJ_G0028932.1 mouse_genomes_project 4 142582338 142598431 + MGP_LPJ_P0068741 Tas1r2 protein_coding protein_coding MGP_LPJ_T0069392.1 MGP_LPJ_G0029087.1 mouse_genomes_project 4 157494725 157612643 - MGP_LPJ_P0069392 Ajap1 protein_coding protein_coding MGP_LPJ_T0069393.1 MGP_LPJ_G0029087.1 mouse_genomes_project 4 157495735 157612011 - MGP_LPJ_P0069393 Ajap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0098604.1 MGP_LPJ_G0036878.1 mouse_genomes_project 4 132940663 132944503 + Gm12971 sense_intronic sense_intronic MGP_LPJ_T0000379.1 MGP_LPJ_G0000317.1 mouse_genomes_project 4 79864560 79864623 + mt-Tt Mt_tRNA Mt_tRNA MGP_LPJ_T0069308.1 MGP_LPJ_G0029075.1 mouse_genomes_project 4 156131507 156135693 + MGP_LPJ_P0069308 Tnfrsf25 protein_coding protein_coding MGP_LPJ_T0069309.1 MGP_LPJ_G0029075.1 mouse_genomes_project 4 156131916 156135685 + MGP_LPJ_P0069309 Tnfrsf25 protein_coding protein_coding MGP_LPJ_T0069310.1 MGP_LPJ_G0029075.1 mouse_genomes_project 4 156131972 156132560 + Tnfrsf25 protein_coding processed_transcript MGP_LPJ_T0069311.1 MGP_LPJ_G0029075.1 mouse_genomes_project 4 156133544 156134897 + Tnfrsf25 protein_coding processed_transcript MGP_LPJ_T0069484.1 MGP_LPJ_G0029104.1 mouse_genomes_project 4 159100564 159104099 - Fam213b protein_coding processed_transcript MGP_LPJ_T0069485.1 MGP_LPJ_G0029104.1 mouse_genomes_project 4 159101459 159104171 - MGP_LPJ_P0069485 Fam213b protein_coding protein_coding MGP_LPJ_T0069486.1 MGP_LPJ_G0029104.1 mouse_genomes_project 4 159102395 159104196 - MGP_LPJ_P0069486 Fam213b protein_coding protein_coding MGP_LPJ_T0068758.1 MGP_LPJ_G0028937.1 mouse_genomes_project 4 143705156 143729356 + MGP_LPJ_P0068758 Rcc2 protein_coding protein_coding MGP_LPJ_T0068759.1 MGP_LPJ_G0028937.1 mouse_genomes_project 4 143706087 143729358 + MGP_LPJ_P0068759 Rcc2 protein_coding protein_coding MGP_LPJ_T0068760.1 MGP_LPJ_G0028937.1 mouse_genomes_project 4 143706087 143716937 + MGP_LPJ_P0068760 Rcc2 protein_coding protein_coding MGP_LPJ_T0068761.1 MGP_LPJ_G0028937.1 mouse_genomes_project 4 143720880 143723510 + Rcc2 protein_coding processed_transcript MGP_LPJ_T0068762.1 MGP_LPJ_G0028937.1 mouse_genomes_project 4 143720907 143723418 + Rcc2 protein_coding processed_transcript MGP_LPJ_T0001436.1 MGP_LPJ_G0001355.1 mouse_genomes_project 4 9433244 9515796 + TEC TEC MGP_LPJ_T0064991.1 MGP_LPJ_G0028087.1 mouse_genomes_project 4 39597663 39665122 + MGP_LPJ_P0064991 Dnaic1 protein_coding protein_coding MGP_LPJ_T0064992.1 MGP_LPJ_G0028087.1 mouse_genomes_project 4 39658607 39665122 + Dnaic1 protein_coding retained_intron MGP_LPJ_T0064993.1 MGP_LPJ_G0028087.1 mouse_genomes_project 4 39660311 39665122 + MGP_LPJ_P0064993 Dnaic1 protein_coding protein_coding MGP_LPJ_T0067698.1 MGP_LPJ_G0028706.1 mouse_genomes_project 4 129193412 129270389 + MGP_LPJ_P0067698 Dlgap3 protein_coding protein_coding MGP_LPJ_T0067699.1 MGP_LPJ_G0028706.1 mouse_genomes_project 4 129197144 129270389 + MGP_LPJ_P0067699 Dlgap3 protein_coding protein_coding MGP_LPJ_T0067700.1 MGP_LPJ_G0028706.1 mouse_genomes_project 4 129220371 129269735 + MGP_LPJ_P0067700 Dlgap3 protein_coding protein_coding MGP_LPJ_T0067701.1 MGP_LPJ_G0028706.1 mouse_genomes_project 4 129234099 129246907 + Dlgap3 protein_coding processed_transcript MGP_LPJ_T0066880.1 MGP_LPJ_G0028514.1 mouse_genomes_project 4 116418189 116470700 + MGP_LPJ_P0066880 Cyp4a30b protein_coding protein_coding MGP_LPJ_T0068293.1 MGP_LPJ_G0028826.1 mouse_genomes_project 4 136641666 136657873 - MGP_LPJ_P0068293 Catsper4 protein_coding protein_coding MGP_LPJ_T0068294.1 MGP_LPJ_G0028826.1 mouse_genomes_project 4 136641666 136657873 - MGP_LPJ_P0068294 Catsper4 protein_coding protein_coding MGP_LPJ_T0068295.1 MGP_LPJ_G0028826.1 mouse_genomes_project 4 136655122 136657862 - MGP_LPJ_P0068295 Catsper4 protein_coding protein_coding MGP_LPJ_T0068296.1 MGP_LPJ_G0028826.1 mouse_genomes_project 4 136656987 136657840 - Catsper4 protein_coding processed_transcript MGP_LPJ_T0069099.1 MGP_LPJ_G0029035.1 mouse_genomes_project 4 152699398 152851435 - MGP_LPJ_P0069099 Pex14 protein_coding protein_coding MGP_LPJ_T0069100.1 MGP_LPJ_G0029035.1 mouse_genomes_project 4 152702099 152851375 - Pex14 protein_coding retained_intron MGP_LPJ_T0069101.1 MGP_LPJ_G0029035.1 mouse_genomes_project 4 152724238 152851374 - Pex14 protein_coding processed_transcript MGP_LPJ_T0069102.1 MGP_LPJ_G0029035.1 mouse_genomes_project 4 152724989 152851368 - MGP_LPJ_P0069102 Pex14 protein_coding nonsense_mediated_decay MGP_LPJ_T0069103.1 MGP_LPJ_G0029035.1 mouse_genomes_project 4 152757589 152851387 - Pex14 protein_coding processed_transcript MGP_LPJ_T0004575.1 MGP_LPJ_G0003974.1 mouse_genomes_project 4 136908231 136909666 - 1700021N21Rik antisense antisense MGP_LPJ_T0014426.1 MGP_LPJ_G0012517.1 mouse_genomes_project 4 24912485 24912922 + processed_pseudogene processed_pseudogene MGP_LPJ_T0067246.1 MGP_LPJ_G0028586.1 mouse_genomes_project 4 119792502 119868633 - MGP_LPJ_P0067246 Cfap57 protein_coding protein_coding MGP_LPJ_T0067247.1 MGP_LPJ_G0028586.1 mouse_genomes_project 4 119792647 119867819 - MGP_LPJ_P0067247 Cfap57 protein_coding protein_coding MGP_LPJ_T0018048.1 MGP_LPJ_G0015494.1 mouse_genomes_project 4 134170926 134193480 - Gm12992 processed_transcript processed_transcript MGP_LPJ_T0018049.1 MGP_LPJ_G0015494.1 mouse_genomes_project 4 134185892 134188966 - Gm12992 processed_transcript processed_transcript MGP_LPJ_T0069742.1 MGP_LPJ_G0029153.1 mouse_genomes_project 4 160543471 160549089 + MGP_LPJ_P0069742 Perm1 protein_coding protein_coding MGP_LPJ_T0099497.1 MGP_LPJ_G0037760.1 mouse_genomes_project 4 95921199 95921360 + Gm25004 snRNA snRNA MGP_LPJ_T0014379.1 MGP_LPJ_G0012470.1 mouse_genomes_project 4 12465807 12466262 - processed_pseudogene processed_pseudogene MGP_LPJ_T0067058.1 MGP_LPJ_G0028552.1 mouse_genomes_project 4 118118740 118124145 - MGP_LPJ_P0067058 Urod protein_coding protein_coding MGP_LPJ_T0067059.1 MGP_LPJ_G0028552.1 mouse_genomes_project 4 118119948 118121397 - Urod protein_coding retained_intron MGP_LPJ_T0067060.1 MGP_LPJ_G0028552.1 mouse_genomes_project 4 118120016 118121618 - Urod protein_coding retained_intron MGP_LPJ_T0067061.1 MGP_LPJ_G0028552.1 mouse_genomes_project 4 118120807 118124096 - Urod protein_coding retained_intron MGP_LPJ_T0067062.1 MGP_LPJ_G0028552.1 mouse_genomes_project 4 118121192 118124089 - MGP_LPJ_P0067062 Urod protein_coding protein_coding MGP_LPJ_T0067063.1 MGP_LPJ_G0028552.1 mouse_genomes_project 4 118122015 118124078 - Urod protein_coding retained_intron MGP_LPJ_T0067064.1 MGP_LPJ_G0028552.1 mouse_genomes_project 4 118122515 118124077 - Urod protein_coding retained_intron MGP_LPJ_T0067065.1 MGP_LPJ_G0028552.1 mouse_genomes_project 4 118122684 118123329 - Urod protein_coding processed_transcript MGP_LPJ_T0067066.1 MGP_LPJ_G0028552.1 mouse_genomes_project 4 118122839 118124072 - Urod protein_coding retained_intron MGP_LPJ_T0067067.1 MGP_LPJ_G0028552.1 mouse_genomes_project 4 118123011 118124112 - Urod protein_coding retained_intron MGP_LPJ_T0066156.1 MGP_LPJ_G0028363.1 mouse_genomes_project 4 94944352 94953257 - Plaa protein_coding processed_transcript MGP_LPJ_T0066157.1 MGP_LPJ_G0028363.1 mouse_genomes_project 4 94946005 94981866 - MGP_LPJ_P0066157 Plaa protein_coding protein_coding MGP_LPJ_T0066158.1 MGP_LPJ_G0028363.1 mouse_genomes_project 4 94948525 94960383 - MGP_LPJ_P0066158 Plaa protein_coding protein_coding MGP_LPJ_T0066159.1 MGP_LPJ_G0028363.1 mouse_genomes_project 4 94950730 94960362 - Plaa protein_coding processed_transcript MGP_LPJ_T0066160.1 MGP_LPJ_G0028363.1 mouse_genomes_project 4 94962644 94981757 - Plaa protein_coding processed_transcript MGP_LPJ_T0066161.1 MGP_LPJ_G0028363.1 mouse_genomes_project 4 94968443 94981803 - Plaa protein_coding processed_transcript MGP_LPJ_T0001434.1 MGP_LPJ_G0001353.1 mouse_genomes_project 4 2940821 2941096 + TEC TEC MGP_LPJ_T0099534.1 MGP_LPJ_G0037797.1 mouse_genomes_project 4 138131219 138131320 + Gm23106 snRNA snRNA MGP_LPJ_T0014565.1 MGP_LPJ_G0012656.1 mouse_genomes_project 4 75546895 75547724 + processed_pseudogene processed_pseudogene MGP_LPJ_T0065789.1 MGP_LPJ_G0028270.1 mouse_genomes_project 4 61785008 61787635 - MGP_LPJ_P0065789 Pole3 protein_coding protein_coding MGP_LPJ_T0065790.1 MGP_LPJ_G0028270.1 mouse_genomes_project 4 61785008 61787635 - MGP_LPJ_P0065790 Pole3 protein_coding nonsense_mediated_decay MGP_LPJ_T0065791.1 MGP_LPJ_G0028270.1 mouse_genomes_project 4 61786901 61787605 - Pole3 protein_coding retained_intron MGP_LPJ_T0068194.1 MGP_LPJ_G0028806.1 mouse_genomes_project 4 135854553 135862396 + MGP_LPJ_P0068194 Fam46b protein_coding protein_coding MGP_LPJ_T0067229.1 MGP_LPJ_G0028581.1 mouse_genomes_project 4 119670123 119674575 - MGP_LPJ_P0067229 Cdc20 protein_coding protein_coding MGP_LPJ_T0067230.1 MGP_LPJ_G0028581.1 mouse_genomes_project 4 119670327 119673801 - MGP_LPJ_P0067230 Cdc20 protein_coding nonsense_mediated_decay MGP_LPJ_T0067231.1 MGP_LPJ_G0028581.1 mouse_genomes_project 4 119670770 119673044 - Cdc20 protein_coding retained_intron MGP_LPJ_T0068330.1 MGP_LPJ_G0028836.1 mouse_genomes_project 4 136836723 136874918 + Pafah2 protein_coding processed_transcript MGP_LPJ_T0068331.1 MGP_LPJ_G0028836.1 mouse_genomes_project 4 136836760 136854958 + Pafah2 protein_coding processed_transcript MGP_LPJ_T0068332.1 MGP_LPJ_G0028836.1 mouse_genomes_project 4 136837630 136853699 + Pafah2 protein_coding processed_transcript MGP_LPJ_T0068333.1 MGP_LPJ_G0028836.1 mouse_genomes_project 4 136837864 136883671 + MGP_LPJ_P0068333 Pafah2 protein_coding protein_coding MGP_LPJ_T0068334.1 MGP_LPJ_G0028836.1 mouse_genomes_project 4 136843092 136845246 + MGP_LPJ_P0068334 Pafah2 protein_coding protein_coding MGP_LPJ_T0068335.1 MGP_LPJ_G0028836.1 mouse_genomes_project 4 136843150 136879363 + Pafah2 protein_coding processed_transcript MGP_LPJ_T0065179.1 MGP_LPJ_G0028119.1 mouse_genomes_project 4 41651709 41653362 - MGP_LPJ_P0065179 Sit1 protein_coding protein_coding MGP_LPJ_T0065180.1 MGP_LPJ_G0028119.1 mouse_genomes_project 4 41651814 41652850 - Sit1 protein_coding processed_transcript MGP_LPJ_T0066380.1 MGP_LPJ_G0028415.1 mouse_genomes_project 4 103451707 103573392 + Sgip1 protein_coding retained_intron MGP_LPJ_T0066381.1 MGP_LPJ_G0028415.1 mouse_genomes_project 4 103463836 103671128 + MGP_LPJ_P0066381 Sgip1 protein_coding unknown_likely_coding MGP_LPJ_T0066382.1 MGP_LPJ_G0028415.1 mouse_genomes_project 4 103464554 103669178 + MGP_LPJ_P0066382 Sgip1 protein_coding protein_coding MGP_LPJ_T0066383.1 MGP_LPJ_G0028415.1 mouse_genomes_project 4 103464747 103566282 + Sgip1 protein_coding processed_transcript MGP_LPJ_T0066384.1 MGP_LPJ_G0028415.1 mouse_genomes_project 4 103464764 103669059 + MGP_LPJ_P0066384 Sgip1 protein_coding protein_coding MGP_LPJ_T0066385.1 MGP_LPJ_G0028415.1 mouse_genomes_project 4 103464771 103572374 + MGP_LPJ_P0066385 Sgip1 protein_coding protein_coding MGP_LPJ_T0066386.1 MGP_LPJ_G0028415.1 mouse_genomes_project 4 103464774 103563718 + Sgip1 protein_coding processed_transcript MGP_LPJ_T0066387.1 MGP_LPJ_G0028415.1 mouse_genomes_project 4 103464782 103668373 + MGP_LPJ_P0066387 Sgip1 protein_coding protein_coding MGP_LPJ_T0066388.1 MGP_LPJ_G0028415.1 mouse_genomes_project 4 103464794 103572687 + Sgip1 protein_coding processed_transcript MGP_LPJ_T0066389.1 MGP_LPJ_G0028415.1 mouse_genomes_project 4 103464884 103614563 + MGP_LPJ_P0066389 Sgip1 protein_coding nonsense_mediated_decay MGP_LPJ_T0066390.1 MGP_LPJ_G0028415.1 mouse_genomes_project 4 103573129 103667799 + MGP_LPJ_P0066390 Sgip1 protein_coding protein_coding MGP_LPJ_T0066391.1 MGP_LPJ_G0028415.1 mouse_genomes_project 4 103616730 103624175 + Sgip1 protein_coding processed_transcript MGP_LPJ_T0066392.1 MGP_LPJ_G0028415.1 mouse_genomes_project 4 103622625 103624348 + Sgip1 protein_coding processed_transcript MGP_LPJ_T0066393.1 MGP_LPJ_G0028415.1 mouse_genomes_project 4 103659862 103665421 + Sgip1 protein_coding processed_transcript MGP_LPJ_T0007934.1 MGP_LPJ_G0006487.1 mouse_genomes_project 4 108581481 108657062 + 1700047F07Rik lincRNA lincRNA MGP_LPJ_T0007935.1 MGP_LPJ_G0006487.1 mouse_genomes_project 4 108581513 108601766 + 1700047F07Rik lincRNA lincRNA MGP_LPJ_T0007936.1 MGP_LPJ_G0006487.1 mouse_genomes_project 4 108600212 108611569 + 1700047F07Rik lincRNA lincRNA MGP_LPJ_T0007937.1 MGP_LPJ_G0006487.1 mouse_genomes_project 4 108600235 108601823 + 1700047F07Rik lincRNA lincRNA MGP_LPJ_T0065829.1 MGP_LPJ_G0028279.1 mouse_genomes_project 4 62646458 62651531 + MGP_LPJ_P0065829 Orm2 protein_coding protein_coding MGP_LPJ_T0065830.1 MGP_LPJ_G0028279.1 mouse_genomes_project 4 62646496 62651529 + MGP_LPJ_P0065830 Orm2 protein_coding unknown_likely_coding MGP_LPJ_T0067025.1 MGP_LPJ_G0028545.1 mouse_genomes_project 4 117820660 117826459 - MGP_LPJ_P0067025 Mmachc protein_coding protein_coding MGP_LPJ_T0067026.1 MGP_LPJ_G0028545.1 mouse_genomes_project 4 117822770 117826341 - Mmachc protein_coding processed_transcript MGP_LPJ_T0066428.1 MGP_LPJ_G0028421.1 mouse_genomes_project 4 103925177 103983182 - MGP_LPJ_P0066428 4921539E11Rik protein_coding protein_coding MGP_LPJ_T0066429.1 MGP_LPJ_G0028421.1 mouse_genomes_project 4 103925177 103983182 - MGP_LPJ_P0066429 4921539E11Rik protein_coding protein_coding MGP_LPJ_T0066430.1 MGP_LPJ_G0028421.1 mouse_genomes_project 4 103929739 103983182 - MGP_LPJ_P0066430 4921539E11Rik protein_coding protein_coding MGP_LPJ_T0007997.1 MGP_LPJ_G0006530.1 mouse_genomes_project 4 134562865 134563023 + Gm28872 lincRNA lincRNA MGP_LPJ_T0014573.1 MGP_LPJ_G0012664.1 mouse_genomes_project 4 78044874 78045800 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014748.1 MGP_LPJ_G0012839.1 mouse_genomes_project 4 138438681 138439179 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008036.1 MGP_LPJ_G0006559.1 mouse_genomes_project 4 152429243 152432125 + Gm13203 lincRNA lincRNA MGP_LPJ_T0014659.1 MGP_LPJ_G0012750.1 mouse_genomes_project 4 109461814 109462196 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018000.1 MGP_LPJ_G0015465.1 mouse_genomes_project 4 63308801 63479498 + 8030451A03Rik processed_transcript processed_transcript MGP_LPJ_T0018001.1 MGP_LPJ_G0015465.1 mouse_genomes_project 4 63308890 63378715 + 8030451A03Rik processed_transcript processed_transcript MGP_LPJ_T0018002.1 MGP_LPJ_G0015465.1 mouse_genomes_project 4 63308907 63312297 + 8030451A03Rik processed_transcript processed_transcript MGP_LPJ_T0018003.1 MGP_LPJ_G0015465.1 mouse_genomes_project 4 63478126 63478519 + 8030451A03Rik processed_transcript processed_transcript MGP_LPJ_T0100805.1 MGP_LPJ_G0039068.1 mouse_genomes_project 4 133463267 133463401 + Gm25261 snoRNA snoRNA MGP_LPJ_T0102158.1 MGP_LPJ_G0040195.1 mouse_genomes_project 4 120150616 120151570 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0014475.1 MGP_LPJ_G0012566.1 mouse_genomes_project 4 39126902 39127236 - processed_pseudogene processed_pseudogene MGP_LPJ_T0064995.1 MGP_LPJ_G0028089.1 mouse_genomes_project 4 39685794 39751184 - MGP_LPJ_P0064995 Cntfr protein_coding protein_coding MGP_LPJ_T0064996.1 MGP_LPJ_G0028089.1 mouse_genomes_project 4 39685794 39752775 - MGP_LPJ_P0064996 Cntfr protein_coding protein_coding MGP_LPJ_T0064997.1 MGP_LPJ_G0028089.1 mouse_genomes_project 4 39695906 39696673 - Cntfr protein_coding processed_transcript MGP_LPJ_T0064998.1 MGP_LPJ_G0028089.1 mouse_genomes_project 4 39702198 39751187 - MGP_LPJ_P0064998 Cntfr protein_coding protein_coding MGP_LPJ_T0064999.1 MGP_LPJ_G0028089.1 mouse_genomes_project 4 39702198 39752824 - MGP_LPJ_P0064999 Cntfr protein_coding protein_coding MGP_LPJ_T0065000.1 MGP_LPJ_G0028089.1 mouse_genomes_project 4 39703506 39751677 - MGP_LPJ_P0065000 Cntfr protein_coding protein_coding MGP_LPJ_T0067416.1 MGP_LPJ_G0028632.1 mouse_genomes_project 4 122483364 122524742 - MGP_LPJ_P0067416 Zmpste24 protein_coding protein_coding MGP_LPJ_T0067417.1 MGP_LPJ_G0028632.1 mouse_genomes_project 4 122493612 122504247 - Zmpste24 protein_coding processed_transcript MGP_LPJ_T0067418.1 MGP_LPJ_G0028632.1 mouse_genomes_project 4 122509453 122522199 - MGP_LPJ_P0067418 Zmpste24 protein_coding protein_coding MGP_LPJ_T0102135.1 MGP_LPJ_G0040172.1 mouse_genomes_project 4 62636099 62639297 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0100738.1 MGP_LPJ_G0039001.1 mouse_genomes_project 4 18414232 18414317 + Gm25977 snoRNA snoRNA MGP_LPJ_T0018031.1 MGP_LPJ_G0015486.1 mouse_genomes_project 4 118360449 118360898 - 1700012C08Rik processed_transcript processed_transcript MGP_LPJ_T0067388.1 MGP_LPJ_G0028626.1 mouse_genomes_project 4 122168543 122233748 - MGP_LPJ_P0067388 Nfyc protein_coding protein_coding MGP_LPJ_T0067389.1 MGP_LPJ_G0028626.1 mouse_genomes_project 4 122168543 122250408 - MGP_LPJ_P0067389 Nfyc protein_coding protein_coding MGP_LPJ_T0067390.1 MGP_LPJ_G0028626.1 mouse_genomes_project 4 122168543 122243747 - MGP_LPJ_P0067390 Nfyc protein_coding protein_coding MGP_LPJ_T0067391.1 MGP_LPJ_G0028626.1 mouse_genomes_project 4 122169058 122173747 - Nfyc protein_coding processed_transcript MGP_LPJ_T0067392.1 MGP_LPJ_G0028626.1 mouse_genomes_project 4 122169281 122203472 - MGP_LPJ_P0067392 Nfyc protein_coding unknown_likely_coding MGP_LPJ_T0067393.1 MGP_LPJ_G0028626.1 mouse_genomes_project 4 122169281 122203472 - MGP_LPJ_P0067393 Nfyc protein_coding protein_coding MGP_LPJ_T0067394.1 MGP_LPJ_G0028626.1 mouse_genomes_project 4 122169301 122176979 - Nfyc protein_coding processed_transcript MGP_LPJ_T0067395.1 MGP_LPJ_G0028626.1 mouse_genomes_project 4 122173236 122179765 - Nfyc protein_coding processed_transcript MGP_LPJ_T0067396.1 MGP_LPJ_G0028626.1 mouse_genomes_project 4 122176802 122243725 - MGP_LPJ_P0067396 Nfyc protein_coding protein_coding MGP_LPJ_T0067397.1 MGP_LPJ_G0028626.1 mouse_genomes_project 4 122180426 122243737 - MGP_LPJ_P0067397 Nfyc protein_coding protein_coding MGP_LPJ_T0067398.1 MGP_LPJ_G0028626.1 mouse_genomes_project 4 122192163 122243748 - MGP_LPJ_P0067398 Nfyc protein_coding protein_coding MGP_LPJ_T0068536.1 MGP_LPJ_G0028882.1 mouse_genomes_project 4 139310581 139513228 - MGP_LPJ_P0068536 Ephb2 protein_coding protein_coding MGP_LPJ_T0068537.1 MGP_LPJ_G0028882.1 mouse_genomes_project 4 139316650 139513196 - MGP_LPJ_P0068537 Ephb2 protein_coding protein_coding MGP_LPJ_T0068538.1 MGP_LPJ_G0028882.1 mouse_genomes_project 4 139317688 139513083 - MGP_LPJ_P0068538 Ephb2 protein_coding protein_coding MGP_LPJ_T0068539.1 MGP_LPJ_G0028882.1 mouse_genomes_project 4 139322711 139324677 - Ephb2 protein_coding retained_intron MGP_LPJ_T0068540.1 MGP_LPJ_G0028882.1 mouse_genomes_project 4 139324487 139357805 - MGP_LPJ_P0068540 Ephb2 protein_coding protein_coding MGP_LPJ_T0068541.1 MGP_LPJ_G0028882.1 mouse_genomes_project 4 139439005 139513214 - Ephb2 protein_coding retained_intron MGP_LPJ_T0007920.1 MGP_LPJ_G0006477.1 mouse_genomes_project 4 101888379 101918599 - Gm12796 lincRNA lincRNA MGP_LPJ_T0064612.1 MGP_LPJ_G0027990.1 mouse_genomes_project 4 11394279 11528315 - MGP_LPJ_P0064612 Slc26a7 protein_coding protein_coding MGP_LPJ_T0064613.1 MGP_LPJ_G0027990.1 mouse_genomes_project 4 11397138 11409938 - Slc26a7 protein_coding processed_transcript MGP_LPJ_T0064614.1 MGP_LPJ_G0027990.1 mouse_genomes_project 4 11397316 11528290 - MGP_LPJ_P0064614 Slc26a7 protein_coding unknown_likely_coding MGP_LPJ_T0064615.1 MGP_LPJ_G0027990.1 mouse_genomes_project 4 11464371 11528035 - MGP_LPJ_P0064615 Slc26a7 protein_coding protein_coding MGP_LPJ_T0064616.1 MGP_LPJ_G0027990.1 mouse_genomes_project 4 11487940 11528179 - MGP_LPJ_P0064616 Slc26a7 protein_coding protein_coding MGP_LPJ_T0014409.1 MGP_LPJ_G0012500.1 mouse_genomes_project 4 19857357 19858058 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014549.1 MGP_LPJ_G0012640.1 mouse_genomes_project 4 71235404 71237087 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010646.1 MGP_LPJ_G0008764.1 mouse_genomes_project 4 131931625 131931697 - Mir7016 miRNA miRNA MGP_LPJ_T0066408.1 MGP_LPJ_G0028419.1 mouse_genomes_project 4 103807689 103809204 + Mier1 protein_coding processed_transcript MGP_LPJ_T0066409.1 MGP_LPJ_G0028419.1 mouse_genomes_project 4 103807694 103859809 + MGP_LPJ_P0066409 Mier1 protein_coding protein_coding MGP_LPJ_T0066410.1 MGP_LPJ_G0028419.1 mouse_genomes_project 4 103807730 103824962 + Mier1 protein_coding processed_transcript MGP_LPJ_T0066411.1 MGP_LPJ_G0028419.1 mouse_genomes_project 4 103807764 103837132 + Mier1 protein_coding processed_transcript MGP_LPJ_T0066412.1 MGP_LPJ_G0028419.1 mouse_genomes_project 4 103808061 103811602 + MGP_LPJ_P0066412 Mier1 protein_coding protein_coding MGP_LPJ_T0066413.1 MGP_LPJ_G0028419.1 mouse_genomes_project 4 103808255 103811966 + Mier1 protein_coding processed_transcript MGP_LPJ_T0066414.1 MGP_LPJ_G0028419.1 mouse_genomes_project 4 103808571 103821238 + MGP_LPJ_P0066414 Mier1 protein_coding protein_coding MGP_LPJ_T0066415.1 MGP_LPJ_G0028419.1 mouse_genomes_project 4 103808859 103859804 + MGP_LPJ_P0066415 Mier1 protein_coding protein_coding MGP_LPJ_T0066416.1 MGP_LPJ_G0028419.1 mouse_genomes_project 4 103808937 103859804 + MGP_LPJ_P0066416 Mier1 protein_coding protein_coding MGP_LPJ_T0066417.1 MGP_LPJ_G0028419.1 mouse_genomes_project 4 103810594 103811890 + Mier1 protein_coding processed_transcript MGP_LPJ_T0066418.1 MGP_LPJ_G0028419.1 mouse_genomes_project 4 103812585 103859807 + MGP_LPJ_P0066418 Mier1 protein_coding protein_coding MGP_LPJ_T0066419.1 MGP_LPJ_G0028419.1 mouse_genomes_project 4 103812689 103836512 + Mier1 protein_coding retained_intron MGP_LPJ_T0066420.1 MGP_LPJ_G0028419.1 mouse_genomes_project 4 103812709 103838362 + Mier1 protein_coding retained_intron MGP_LPJ_T0066421.1 MGP_LPJ_G0028419.1 mouse_genomes_project 4 103836995 103856809 + MGP_LPJ_P0066421 Mier1 protein_coding protein_coding MGP_LPJ_T0066422.1 MGP_LPJ_G0028419.1 mouse_genomes_project 4 103852640 103856878 + Mier1 protein_coding processed_transcript MGP_LPJ_T0068843.1 MGP_LPJ_G0028958.1 mouse_genomes_project 4 144512559 144518975 - MGP_LPJ_P0068843 Gm694 protein_coding protein_coding MGP_LPJ_T0066123.1 MGP_LPJ_G0028348.1 mouse_genomes_project 4 89001948 89002521 + MGP_LPJ_P0066123 protein_coding protein_coding MGP_LPJ_T0008020.1 MGP_LPJ_G0006544.1 mouse_genomes_project 4 142854163 142855578 + Gm1667 lincRNA lincRNA MGP_LPJ_T0064713.1 MGP_LPJ_G0028022.1 mouse_genomes_project 4 21706975 21794392 + Mms22l protein_coding retained_intron MGP_LPJ_T0064714.1 MGP_LPJ_G0028022.1 mouse_genomes_project 4 21706975 21816013 + MGP_LPJ_P0064714 Mms22l protein_coding protein_coding MGP_LPJ_T0064715.1 MGP_LPJ_G0028022.1 mouse_genomes_project 4 21706986 21714954 + MGP_LPJ_P0064715 Mms22l protein_coding protein_coding MGP_LPJ_T0064716.1 MGP_LPJ_G0028022.1 mouse_genomes_project 4 21706989 21707569 + Mms22l protein_coding processed_transcript MGP_LPJ_T0064717.1 MGP_LPJ_G0028022.1 mouse_genomes_project 4 21707068 21816009 + MGP_LPJ_P0064717 Mms22l protein_coding protein_coding MGP_LPJ_T0064718.1 MGP_LPJ_G0028022.1 mouse_genomes_project 4 21708550 21740654 + MGP_LPJ_P0064718 Mms22l protein_coding protein_coding MGP_LPJ_T0064719.1 MGP_LPJ_G0028022.1 mouse_genomes_project 4 21716680 21816012 + Mms22l protein_coding retained_intron MGP_LPJ_T0064720.1 MGP_LPJ_G0028022.1 mouse_genomes_project 4 21718952 21813090 + MGP_LPJ_P0064720 Mms22l protein_coding nonsense_mediated_decay MGP_LPJ_T0064721.1 MGP_LPJ_G0028022.1 mouse_genomes_project 4 21747895 21787820 + MGP_LPJ_P0064721 Mms22l protein_coding protein_coding MGP_LPJ_T0064722.1 MGP_LPJ_G0028022.1 mouse_genomes_project 4 21791871 21804278 + Mms22l protein_coding processed_transcript MGP_LPJ_T0010663.1 MGP_LPJ_G0008781.1 mouse_genomes_project 4 141121667 141121736 - Mir7019 miRNA miRNA MGP_LPJ_T0014489.1 MGP_LPJ_G0012580.1 mouse_genomes_project 4 45590243 45590378 + processed_pseudogene processed_pseudogene MGP_LPJ_T0068216.1 MGP_LPJ_G0028814.1 mouse_genomes_project 4 136055075 136067364 - MGP_LPJ_P0068216 Pigv protein_coding protein_coding MGP_LPJ_T0068217.1 MGP_LPJ_G0028814.1 mouse_genomes_project 4 136056933 136067364 - MGP_LPJ_P0068217 Pigv protein_coding protein_coding MGP_LPJ_T0068218.1 MGP_LPJ_G0028814.1 mouse_genomes_project 4 136063464 136067364 - Pigv protein_coding processed_transcript MGP_LPJ_T0066451.1 MGP_LPJ_G0028428.1 mouse_genomes_project 4 105754053 105841531 - MGP_LPJ_P0066451 Prkaa2 protein_coding protein_coding MGP_LPJ_T0064846.1 MGP_LPJ_G0028052.1 mouse_genomes_project 4 32364140 32408687 - MGP_LPJ_P0064846 Cfap206 protein_coding protein_coding MGP_LPJ_T0064847.1 MGP_LPJ_G0028052.1 mouse_genomes_project 4 32364542 32398051 - Cfap206 protein_coding processed_transcript MGP_LPJ_T0064848.1 MGP_LPJ_G0028052.1 mouse_genomes_project 4 32389404 32408659 - MGP_LPJ_P0064848 Cfap206 protein_coding protein_coding MGP_LPJ_T0064849.1 MGP_LPJ_G0028052.1 mouse_genomes_project 4 32399826 32408676 - MGP_LPJ_P0064849 Cfap206 protein_coding nonsense_mediated_decay MGP_LPJ_T0064850.1 MGP_LPJ_G0028052.1 mouse_genomes_project 4 32399857 32408676 - MGP_LPJ_P0064850 Cfap206 protein_coding protein_coding MGP_LPJ_T0064851.1 MGP_LPJ_G0028052.1 mouse_genomes_project 4 32402001 32408676 - Cfap206 protein_coding processed_transcript MGP_LPJ_T0064903.1 MGP_LPJ_G0028066.1 mouse_genomes_project 4 38408638 38413354 + MGP_LPJ_P0064903 Tmem215 protein_coding protein_coding MGP_LPJ_T0064904.1 MGP_LPJ_G0028066.1 mouse_genomes_project 4 38409588 38412070 + MGP_LPJ_P0064904 Tmem215 protein_coding protein_coding MGP_LPJ_T0014586.1 MGP_LPJ_G0012677.1 mouse_genomes_project 4 84416672 84416979 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004464.1 MGP_LPJ_G0003890.1 mouse_genomes_project 4 39669148 39670041 + Gm12405 antisense antisense MGP_LPJ_T0068833.1 MGP_LPJ_G0028954.1 mouse_genomes_project 4 144439424 144454720 + MGP_LPJ_P0068833 Fam131c protein_coding protein_coding MGP_LPJ_T0014416.1 MGP_LPJ_G0012507.1 mouse_genomes_project 4 22579737 22580565 - processed_pseudogene processed_pseudogene MGP_LPJ_T0067236.1 MGP_LPJ_G0028583.1 mouse_genomes_project 4 119710387 119728947 - MGP_LPJ_P0067236 Tie1 protein_coding protein_coding MGP_LPJ_T0067237.1 MGP_LPJ_G0028583.1 mouse_genomes_project 4 119710387 119729253 - MGP_LPJ_P0067237 Tie1 protein_coding protein_coding MGP_LPJ_T0067238.1 MGP_LPJ_G0028583.1 mouse_genomes_project 4 119717224 119728985 - Tie1 protein_coding processed_transcript MGP_LPJ_T0100748.1 MGP_LPJ_G0039011.1 mouse_genomes_project 4 39208468 39208549 - Gm24837 snoRNA snoRNA MGP_LPJ_T0017980.1 MGP_LPJ_G0015451.1 mouse_genomes_project 4 15417450 15926323 + processed_transcript processed_transcript MGP_LPJ_T0008014.1 MGP_LPJ_G0006538.1 mouse_genomes_project 4 139807675 139808549 - 1700037C06Rik lincRNA lincRNA MGP_LPJ_T0065677.1 MGP_LPJ_G0028239.1 mouse_genomes_project 4 57227841 57318577 + MGP_LPJ_P0065677 Musk protein_coding protein_coding MGP_LPJ_T0065678.1 MGP_LPJ_G0028239.1 mouse_genomes_project 4 57227843 57318578 + MGP_LPJ_P0065678 Musk protein_coding protein_coding MGP_LPJ_T0065679.1 MGP_LPJ_G0028239.1 mouse_genomes_project 4 57227843 57318578 + MGP_LPJ_P0065679 Musk protein_coding protein_coding MGP_LPJ_T0065680.1 MGP_LPJ_G0028239.1 mouse_genomes_project 4 57227843 57318577 + MGP_LPJ_P0065680 Musk protein_coding protein_coding MGP_LPJ_T0065681.1 MGP_LPJ_G0028239.1 mouse_genomes_project 4 57227843 57318578 + MGP_LPJ_P0065681 Musk protein_coding protein_coding MGP_LPJ_T0065682.1 MGP_LPJ_G0028239.1 mouse_genomes_project 4 57227843 57318577 + MGP_LPJ_P0065682 Musk protein_coding protein_coding MGP_LPJ_T0065683.1 MGP_LPJ_G0028239.1 mouse_genomes_project 4 57227843 57318577 + MGP_LPJ_P0065683 Musk protein_coding protein_coding MGP_LPJ_T0065684.1 MGP_LPJ_G0028239.1 mouse_genomes_project 4 57228049 57246090 + Musk protein_coding processed_transcript MGP_LPJ_T0066850.1 MGP_LPJ_G0028502.1 mouse_genomes_project 4 115345837 115559793 + MGP_LPJ_P0066850 Trabd2b protein_coding protein_coding MGP_LPJ_T0007827.1 MGP_LPJ_G0006397.1 mouse_genomes_project 4 16782237 16785392 - Gm12354 lincRNA lincRNA MGP_LPJ_T0007828.1 MGP_LPJ_G0006397.1 mouse_genomes_project 4 16782237 16785705 - Gm12354 lincRNA lincRNA MGP_LPJ_T0068342.1 MGP_LPJ_G0028838.1 mouse_genomes_project 4 136969100 136982308 + MGP_LPJ_P0068342 Paqr7 protein_coding protein_coding MGP_LPJ_T0068343.1 MGP_LPJ_G0028838.1 mouse_genomes_project 4 136969378 136980701 + MGP_LPJ_P0068343 Paqr7 protein_coding protein_coding MGP_LPJ_T0068344.1 MGP_LPJ_G0028838.1 mouse_genomes_project 4 136969378 136981032 + MGP_LPJ_P0068344 Paqr7 protein_coding protein_coding MGP_LPJ_T0068345.1 MGP_LPJ_G0028838.1 mouse_genomes_project 4 136969384 136980761 + MGP_LPJ_P0068345 Paqr7 protein_coding protein_coding MGP_LPJ_T0068346.1 MGP_LPJ_G0028838.1 mouse_genomes_project 4 136969407 136983690 + MGP_LPJ_P0068346 Paqr7 protein_coding protein_coding MGP_LPJ_T0068347.1 MGP_LPJ_G0028838.1 mouse_genomes_project 4 136969444 136980481 + Paqr7 protein_coding processed_transcript MGP_LPJ_T0008009.1 MGP_LPJ_G0006536.1 mouse_genomes_project 4 138173673 138177217 + 1700029M20Rik lincRNA lincRNA MGP_LPJ_T0008010.1 MGP_LPJ_G0006536.1 mouse_genomes_project 4 138173792 138175504 + 1700029M20Rik lincRNA lincRNA MGP_LPJ_T0008011.1 MGP_LPJ_G0006536.1 mouse_genomes_project 4 138173836 138175504 + 1700029M20Rik lincRNA lincRNA MGP_LPJ_T0008012.1 MGP_LPJ_G0006536.1 mouse_genomes_project 4 138174271 138175004 + 1700029M20Rik lincRNA lincRNA MGP_LPJ_T0065877.1 MGP_LPJ_G0028294.1 mouse_genomes_project 4 69726957 69920940 - MGP_LPJ_P0065877 Cdk5rap2 protein_coding protein_coding MGP_LPJ_T0065878.1 MGP_LPJ_G0028294.1 mouse_genomes_project 4 69733894 69920915 - MGP_LPJ_P0065878 Cdk5rap2 protein_coding nonsense_mediated_decay MGP_LPJ_T0065879.1 MGP_LPJ_G0028294.1 mouse_genomes_project 4 69749215 69777125 - MGP_LPJ_P0065879 Cdk5rap2 protein_coding protein_coding MGP_LPJ_T0065880.1 MGP_LPJ_G0028294.1 mouse_genomes_project 4 69753337 69754719 - Cdk5rap2 protein_coding processed_transcript MGP_LPJ_T0065881.1 MGP_LPJ_G0028294.1 mouse_genomes_project 4 69907704 69912332 - Cdk5rap2 protein_coding processed_transcript MGP_LPJ_T0014665.1 MGP_LPJ_G0012756.1 mouse_genomes_project 4 111587726 111587994 + processed_pseudogene processed_pseudogene MGP_LPJ_T0066820.1 MGP_LPJ_G0028494.1 mouse_genomes_project 4 113009362 113037985 - MGP_LPJ_P0066820 Slc5a9 protein_coding protein_coding MGP_LPJ_T0066821.1 MGP_LPJ_G0028494.1 mouse_genomes_project 4 113009416 113018346 - Slc5a9 protein_coding processed_transcript MGP_LPJ_T0066822.1 MGP_LPJ_G0028494.1 mouse_genomes_project 4 113010260 113033836 - MGP_LPJ_P0066822 Slc5a9 protein_coding protein_coding MGP_LPJ_T0066823.1 MGP_LPJ_G0028494.1 mouse_genomes_project 4 113011234 113037821 - MGP_LPJ_P0066823 Slc5a9 protein_coding protein_coding MGP_LPJ_T0066824.1 MGP_LPJ_G0028494.1 mouse_genomes_project 4 113011478 113014615 - Slc5a9 protein_coding processed_transcript MGP_LPJ_T0066825.1 MGP_LPJ_G0028494.1 mouse_genomes_project 4 113025334 113031449 - MGP_LPJ_P0066825 Slc5a9 protein_coding protein_coding MGP_LPJ_T0066826.1 MGP_LPJ_G0028494.1 mouse_genomes_project 4 113025663 113027163 - Slc5a9 protein_coding processed_transcript MGP_LPJ_T0066827.1 MGP_LPJ_G0028494.1 mouse_genomes_project 4 113025702 113026428 - Slc5a9 protein_coding processed_transcript MGP_LPJ_T0067995.1 MGP_LPJ_G0028767.1 mouse_genomes_project 4 133118133 133145029 + MGP_LPJ_P0067995 Laptm5 protein_coding protein_coding MGP_LPJ_T0067996.1 MGP_LPJ_G0028767.1 mouse_genomes_project 4 133118315 133135259 + MGP_LPJ_P0067996 Laptm5 protein_coding protein_coding MGP_LPJ_T0067997.1 MGP_LPJ_G0028767.1 mouse_genomes_project 4 133118321 133131636 + Laptm5 protein_coding processed_transcript MGP_LPJ_T0067998.1 MGP_LPJ_G0028767.1 mouse_genomes_project 4 133118327 133135262 + Laptm5 protein_coding processed_transcript MGP_LPJ_T0067999.1 MGP_LPJ_G0028767.1 mouse_genomes_project 4 133118328 133132935 + Laptm5 protein_coding processed_transcript MGP_LPJ_T0068000.1 MGP_LPJ_G0028767.1 mouse_genomes_project 4 133118365 133141823 + MGP_LPJ_P0068000 Laptm5 protein_coding protein_coding MGP_LPJ_T0068001.1 MGP_LPJ_G0028767.1 mouse_genomes_project 4 133120467 133135280 + Laptm5 protein_coding processed_transcript MGP_LPJ_T0068002.1 MGP_LPJ_G0028767.1 mouse_genomes_project 4 133120665 133133422 + Laptm5 protein_coding processed_transcript MGP_LPJ_T0068003.1 MGP_LPJ_G0028767.1 mouse_genomes_project 4 133120948 133143234 + MGP_LPJ_P0068003 Laptm5 protein_coding protein_coding MGP_LPJ_T0068004.1 MGP_LPJ_G0028767.1 mouse_genomes_project 4 133138603 133142107 + Laptm5 protein_coding processed_transcript MGP_LPJ_T0067286.1 MGP_LPJ_G0028604.1 mouse_genomes_project 4 120494491 120507589 - MGP_LPJ_P0067286 4930538K18Rik protein_coding protein_coding MGP_LPJ_T0068999.1 MGP_LPJ_G0029013.1 mouse_genomes_project 4 151540652 151567519 - MGP_LPJ_P0068999 Plod1 protein_coding protein_coding MGP_LPJ_T0069000.1 MGP_LPJ_G0029013.1 mouse_genomes_project 4 151546503 151551795 - MGP_LPJ_P0069000 Plod1 protein_coding protein_coding MGP_LPJ_T0069001.1 MGP_LPJ_G0029013.1 mouse_genomes_project 4 151553151 151567494 - Plod1 protein_coding retained_intron MGP_LPJ_T0069002.1 MGP_LPJ_G0029013.1 mouse_genomes_project 4 151553538 151554431 - Plod1 protein_coding retained_intron MGP_LPJ_T0069003.1 MGP_LPJ_G0029013.1 mouse_genomes_project 4 151558367 151567477 - MGP_LPJ_P0069003 Plod1 protein_coding protein_coding MGP_LPJ_T0069004.1 MGP_LPJ_G0029013.1 mouse_genomes_project 4 151562402 151567460 - Plod1 protein_coding processed_transcript MGP_LPJ_T0014377.1 MGP_LPJ_G0012468.1 mouse_genomes_project 4 12094693 12095020 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014721.1 MGP_LPJ_G0012812.1 mouse_genomes_project 4 128497388 128497731 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007896.1 MGP_LPJ_G0006456.1 mouse_genomes_project 4 83850100 83854220 - Gm11415 lincRNA lincRNA MGP_LPJ_T0004608.1 MGP_LPJ_G0004000.1 mouse_genomes_project 4 151717757 151719378 - Gm13201 antisense antisense MGP_LPJ_T0004609.1 MGP_LPJ_G0004000.1 mouse_genomes_project 4 151717972 151722597 - Gm13201 antisense antisense MGP_LPJ_T0014343.1 MGP_LPJ_G0012434.1 mouse_genomes_project 4 240331 240931 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099531.1 MGP_LPJ_G0037794.1 mouse_genomes_project 4 135272820 135272927 - Gm24913 snRNA snRNA MGP_LPJ_T0066183.1 MGP_LPJ_G0028369.1 mouse_genomes_project 4 95424164 95427353 - MGP_LPJ_P0066183 Jun protein_coding protein_coding MGP_LPJ_T0066355.1 MGP_LPJ_G0028408.1 mouse_genomes_project 4 102339641 102437046 + MGP_LPJ_P0066355 Lepr protein_coding protein_coding MGP_LPJ_T0066356.1 MGP_LPJ_G0028408.1 mouse_genomes_project 4 102339641 102438731 + MGP_LPJ_P0066356 Lepr protein_coding protein_coding MGP_LPJ_T0066357.1 MGP_LPJ_G0028408.1 mouse_genomes_project 4 102339641 102419868 + MGP_LPJ_P0066357 Lepr protein_coding protein_coding MGP_LPJ_T0066358.1 MGP_LPJ_G0028408.1 mouse_genomes_project 4 102339644 102361137 + MGP_LPJ_P0066358 Lepr protein_coding protein_coding MGP_LPJ_T0066359.1 MGP_LPJ_G0028408.1 mouse_genomes_project 4 102391492 102401216 + Lepr protein_coding processed_transcript MGP_LPJ_T0066360.1 MGP_LPJ_G0028408.1 mouse_genomes_project 4 102393901 102406846 + Lepr protein_coding processed_transcript MGP_LPJ_T0066361.1 MGP_LPJ_G0028408.1 mouse_genomes_project 4 102416564 102419766 + Lepr protein_coding processed_transcript MGP_LPJ_T0004497.1 MGP_LPJ_G0003919.1 mouse_genomes_project 4 95345609 95403211 + Gm12694 antisense antisense MGP_LPJ_T0007945.1 MGP_LPJ_G0006494.1 mouse_genomes_project 4 116880343 116884142 + Gm12847 lincRNA lincRNA MGP_LPJ_T0067431.1 MGP_LPJ_G0028640.1 mouse_genomes_project 4 124517146 124545587 - MGP_LPJ_P0067431 Cap1 protein_coding protein_coding MGP_LPJ_T0067432.1 MGP_LPJ_G0028640.1 mouse_genomes_project 4 124517146 124545720 - MGP_LPJ_P0067432 Cap1 protein_coding protein_coding MGP_LPJ_T0067433.1 MGP_LPJ_G0028640.1 mouse_genomes_project 4 124517146 124545732 - MGP_LPJ_P0067433 Cap1 protein_coding protein_coding MGP_LPJ_T0067434.1 MGP_LPJ_G0028640.1 mouse_genomes_project 4 124523010 124525225 - Cap1 protein_coding processed_transcript MGP_LPJ_T0067435.1 MGP_LPJ_G0028640.1 mouse_genomes_project 4 124527924 124545641 - MGP_LPJ_P0067435 Cap1 protein_coding protein_coding MGP_LPJ_T0067436.1 MGP_LPJ_G0028640.1 mouse_genomes_project 4 124531272 124545536 - Cap1 protein_coding processed_transcript MGP_LPJ_T0067437.1 MGP_LPJ_G0028640.1 mouse_genomes_project 4 124532363 124545540 - Cap1 protein_coding processed_transcript MGP_LPJ_T0014595.1 MGP_LPJ_G0012686.1 mouse_genomes_project 4 88358448 88358723 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014584.1 MGP_LPJ_G0012675.1 mouse_genomes_project 4 83571349 83571812 + processed_pseudogene processed_pseudogene MGP_LPJ_T0067411.1 MGP_LPJ_G0028630.1 mouse_genomes_project 4 122390433 122439255 - MGP_LPJ_P0067411 Smap2 protein_coding protein_coding MGP_LPJ_T0067412.1 MGP_LPJ_G0028630.1 mouse_genomes_project 4 122393990 122397811 - Smap2 protein_coding processed_transcript MGP_LPJ_T0014469.1 MGP_LPJ_G0012560.1 mouse_genomes_project 4 37770494 37771182 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065289.1 MGP_LPJ_G0028145.1 mouse_genomes_project 4 42251302 42305017 - MGP_LPJ_P0065289 Gne protein_coding protein_coding MGP_LPJ_T0065290.1 MGP_LPJ_G0028145.1 mouse_genomes_project 4 42254037 42273728 - MGP_LPJ_P0065290 Gne protein_coding nonsense_mediated_decay MGP_LPJ_T0065291.1 MGP_LPJ_G0028145.1 mouse_genomes_project 4 42254053 42292267 - MGP_LPJ_P0065291 Gne protein_coding protein_coding MGP_LPJ_T0065292.1 MGP_LPJ_G0028145.1 mouse_genomes_project 4 42254057 42284991 - MGP_LPJ_P0065292 Gne protein_coding nonsense_mediated_decay MGP_LPJ_T0065293.1 MGP_LPJ_G0028145.1 mouse_genomes_project 4 42254185 42285031 - MGP_LPJ_P0065293 Gne protein_coding protein_coding MGP_LPJ_T0065294.1 MGP_LPJ_G0028145.1 mouse_genomes_project 4 42264385 42292113 - MGP_LPJ_P0065294 Gne protein_coding nonsense_mediated_decay MGP_LPJ_T0065295.1 MGP_LPJ_G0028145.1 mouse_genomes_project 4 42271305 42285132 - MGP_LPJ_P0065295 Gne protein_coding protein_coding MGP_LPJ_T0065296.1 MGP_LPJ_G0028145.1 mouse_genomes_project 4 42273735 42281606 - Gne protein_coding retained_intron MGP_LPJ_T0065297.1 MGP_LPJ_G0028145.1 mouse_genomes_project 4 42278130 42305007 - Gne protein_coding retained_intron MGP_LPJ_T0065298.1 MGP_LPJ_G0028145.1 mouse_genomes_project 4 42278298 42304763 - MGP_LPJ_P0065298 Gne protein_coding protein_coding MGP_LPJ_T0065299.1 MGP_LPJ_G0028145.1 mouse_genomes_project 4 42278402 42292225 - Gne protein_coding processed_transcript MGP_LPJ_T0065300.1 MGP_LPJ_G0028145.1 mouse_genomes_project 4 42278421 42292091 - MGP_LPJ_P0065300 Gne protein_coding protein_coding MGP_LPJ_T0065301.1 MGP_LPJ_G0028145.1 mouse_genomes_project 4 42278533 42292506 - MGP_LPJ_P0065301 Gne protein_coding protein_coding MGP_LPJ_T0065302.1 MGP_LPJ_G0028145.1 mouse_genomes_project 4 42278542 42292507 - MGP_LPJ_P0065302 Gne protein_coding protein_coding MGP_LPJ_T0099473.1 MGP_LPJ_G0037736.1 mouse_genomes_project 4 37194747 37194911 - Gm25581 snRNA snRNA MGP_LPJ_T0067263.1 MGP_LPJ_G0028598.1 mouse_genomes_project 4 120231465 120238787 + MGP_LPJ_P0067263 Lao1 protein_coding protein_coding MGP_LPJ_T0067264.1 MGP_LPJ_G0028598.1 mouse_genomes_project 4 120235256 120237958 + Lao1 protein_coding processed_transcript MGP_LPJ_T0068205.1 MGP_LPJ_G0028810.1 mouse_genomes_project 4 135932921 135936065 + MGP_LPJ_P0068205 Nr0b2 protein_coding protein_coding MGP_LPJ_T0018044.1 MGP_LPJ_G0015493.1 mouse_genomes_project 4 129031813 129036439 + Gm12940 processed_transcript processed_transcript MGP_LPJ_T0018045.1 MGP_LPJ_G0015493.1 mouse_genomes_project 4 129033530 129036439 + Gm12940 processed_transcript processed_transcript MGP_LPJ_T0018046.1 MGP_LPJ_G0015493.1 mouse_genomes_project 4 129033764 129049700 + Gm12940 processed_transcript processed_transcript MGP_LPJ_T0018047.1 MGP_LPJ_G0015493.1 mouse_genomes_project 4 129035207 129036377 + Gm12940 processed_transcript processed_transcript MGP_LPJ_T0014734.1 MGP_LPJ_G0012825.1 mouse_genomes_project 4 134506082 134506474 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100749.1 MGP_LPJ_G0039012.1 mouse_genomes_project 4 39212316 39212394 - Gm23090 snoRNA snoRNA MGP_LPJ_T0008016.1 MGP_LPJ_G0006540.1 mouse_genomes_project 4 139850572 139856557 - Gm13003 lincRNA lincRNA MGP_LPJ_T0068030.1 MGP_LPJ_G0028772.1 mouse_genomes_project 4 134195222 134196592 + MGP_LPJ_P0068030 Tmem200b protein_coding protein_coding MGP_LPJ_T0064739.1 MGP_LPJ_G0028028.1 mouse_genomes_project 4 22842833 23044337 - MGP_LPJ_P0064739 Fut9 protein_coding protein_coding MGP_LPJ_T0064740.1 MGP_LPJ_G0028028.1 mouse_genomes_project 4 22852851 23044435 - MGP_LPJ_P0064740 Fut9 protein_coding protein_coding MGP_LPJ_T0064741.1 MGP_LPJ_G0028028.1 mouse_genomes_project 4 23041884 23044046 - Fut9 protein_coding processed_transcript MGP_LPJ_T0004461.1 MGP_LPJ_G0003887.1 mouse_genomes_project 4 38192330 38193558 + antisense antisense MGP_LPJ_T0014560.1 MGP_LPJ_G0012651.1 mouse_genomes_project 4 74756745 74756946 - processed_pseudogene processed_pseudogene MGP_LPJ_T0068884.1 MGP_LPJ_G0028966.1 mouse_genomes_project 4 144791893 144793642 - MGP_LPJ_P0068884 protein_coding protein_coding MGP_LPJ_T0066945.1 MGP_LPJ_G0028530.1 mouse_genomes_project 4 117137805 117159590 + MGP_LPJ_P0066945 Lrrc41 protein_coding protein_coding MGP_LPJ_T0066946.1 MGP_LPJ_G0028530.1 mouse_genomes_project 4 117137999 117145603 + Lrrc41 protein_coding processed_transcript MGP_LPJ_T0066947.1 MGP_LPJ_G0028530.1 mouse_genomes_project 4 117138081 117151076 + Lrrc41 protein_coding processed_transcript MGP_LPJ_T0066948.1 MGP_LPJ_G0028530.1 mouse_genomes_project 4 117139421 117151145 + Lrrc41 protein_coding processed_transcript MGP_LPJ_T0066949.1 MGP_LPJ_G0028530.1 mouse_genomes_project 4 117141995 117145601 + Lrrc41 protein_coding processed_transcript MGP_LPJ_T0066950.1 MGP_LPJ_G0028530.1 mouse_genomes_project 4 117152028 117155856 + Lrrc41 protein_coding processed_transcript MGP_LPJ_T0100728.1 MGP_LPJ_G0038991.1 mouse_genomes_project 4 135411 135538 + Gm22541 snoRNA snoRNA MGP_LPJ_T0064941.1 MGP_LPJ_G0028075.1 mouse_genomes_project 4 39013842 39028894 - MGP_LPJ_P0064941 Aqp7 protein_coding protein_coding MGP_LPJ_T0064942.1 MGP_LPJ_G0028075.1 mouse_genomes_project 4 39013842 39031585 - MGP_LPJ_P0064942 Aqp7 protein_coding protein_coding MGP_LPJ_T0064943.1 MGP_LPJ_G0028075.1 mouse_genomes_project 4 39017262 39023321 - Aqp7 protein_coding processed_transcript MGP_LPJ_T0064944.1 MGP_LPJ_G0028075.1 mouse_genomes_project 4 39017504 39018679 - Aqp7 protein_coding processed_transcript MGP_LPJ_T0068992.1 MGP_LPJ_G0029012.1 mouse_genomes_project 4 151496718 151534152 - MGP_LPJ_P0068992 Mfn2 protein_coding protein_coding MGP_LPJ_T0068993.1 MGP_LPJ_G0029012.1 mouse_genomes_project 4 151496718 151534169 - MGP_LPJ_P0068993 Mfn2 protein_coding protein_coding MGP_LPJ_T0068994.1 MGP_LPJ_G0029012.1 mouse_genomes_project 4 151497135 151534163 - MGP_LPJ_P0068994 Mfn2 protein_coding protein_coding MGP_LPJ_T0068995.1 MGP_LPJ_G0029012.1 mouse_genomes_project 4 151504348 151534163 - MGP_LPJ_P0068995 Mfn2 protein_coding protein_coding MGP_LPJ_T0068996.1 MGP_LPJ_G0029012.1 mouse_genomes_project 4 151508561 151510427 - Mfn2 protein_coding processed_transcript MGP_LPJ_T0068997.1 MGP_LPJ_G0029012.1 mouse_genomes_project 4 151510237 151532862 - MGP_LPJ_P0068997 Mfn2 protein_coding protein_coding MGP_LPJ_T0068998.1 MGP_LPJ_G0029012.1 mouse_genomes_project 4 151522371 151534123 - MGP_LPJ_P0068998 Mfn2 protein_coding protein_coding MGP_LPJ_T0004545.1 MGP_LPJ_G0003951.1 mouse_genomes_project 4 120420910 120425977 - Gm12868 antisense antisense MGP_LPJ_T0065874.1 MGP_LPJ_G0028293.1 mouse_genomes_project 4 68223284 68433892 - MGP_LPJ_P0065874 Brinp1 protein_coding protein_coding MGP_LPJ_T0065875.1 MGP_LPJ_G0028293.1 mouse_genomes_project 4 68262443 68314092 - Brinp1 protein_coding processed_transcript MGP_LPJ_T0065876.1 MGP_LPJ_G0028293.1 mouse_genomes_project 4 68300467 68303133 - Brinp1 protein_coding processed_transcript MGP_LPJ_T0014755.1 MGP_LPJ_G0012846.1 mouse_genomes_project 4 139915541 139916151 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014425.1 MGP_LPJ_G0012516.1 mouse_genomes_project 4 24552374 24552644 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018028.1 MGP_LPJ_G0015484.1 mouse_genomes_project 4 115872223 115884919 + Foxd2os processed_transcript processed_transcript MGP_LPJ_T0018029.1 MGP_LPJ_G0015484.1 mouse_genomes_project 4 115872223 115884073 + Foxd2os processed_transcript processed_transcript MGP_LPJ_T0007994.1 MGP_LPJ_G0006527.1 mouse_genomes_project 4 133947969 133963844 - Gm16080 lincRNA lincRNA MGP_LPJ_T0004535.1 MGP_LPJ_G0003942.1 mouse_genomes_project 4 117945818 117952518 + Gm12996 antisense antisense MGP_LPJ_T0066893.1 MGP_LPJ_G0028519.1 mouse_genomes_project 4 116804867 116841629 + MGP_LPJ_P0066893 Efcab14 protein_coding protein_coding MGP_LPJ_T0066894.1 MGP_LPJ_G0028519.1 mouse_genomes_project 4 116804902 116825421 + Efcab14 protein_coding processed_transcript MGP_LPJ_T0066895.1 MGP_LPJ_G0028519.1 mouse_genomes_project 4 116804902 116836285 + MGP_LPJ_P0066895 Efcab14 protein_coding protein_coding MGP_LPJ_T0066896.1 MGP_LPJ_G0028519.1 mouse_genomes_project 4 116804903 116821054 + Efcab14 protein_coding processed_transcript MGP_LPJ_T0066897.1 MGP_LPJ_G0028519.1 mouse_genomes_project 4 116805196 116844532 + MGP_LPJ_P0066897 Efcab14 protein_coding protein_coding MGP_LPJ_T0066898.1 MGP_LPJ_G0028519.1 mouse_genomes_project 4 116805566 116841272 + MGP_LPJ_P0066898 Efcab14 protein_coding protein_coding MGP_LPJ_T0066899.1 MGP_LPJ_G0028519.1 mouse_genomes_project 4 116833593 116842382 + Efcab14 protein_coding processed_transcript MGP_LPJ_T0068956.1 MGP_LPJ_G0029001.1 mouse_genomes_project 4 148096534 148110425 + MGP_LPJ_P0068956 Gm436 protein_coding protein_coding MGP_LPJ_T0018036.1 MGP_LPJ_G0015491.1 mouse_genomes_project 4 126796821 126798412 + 9930104L06Rik processed_transcript processed_transcript MGP_LPJ_T0018037.1 MGP_LPJ_G0015491.1 mouse_genomes_project 4 126796831 126799228 + 9930104L06Rik processed_transcript retained_intron MGP_LPJ_T0018038.1 MGP_LPJ_G0015491.1 mouse_genomes_project 4 126796835 126802162 + 9930104L06Rik processed_transcript processed_transcript MGP_LPJ_T0018039.1 MGP_LPJ_G0015491.1 mouse_genomes_project 4 126796838 126804207 + 9930104L06Rik processed_transcript retained_intron MGP_LPJ_T0018040.1 MGP_LPJ_G0015491.1 mouse_genomes_project 4 126796847 126804208 + 9930104L06Rik processed_transcript processed_transcript MGP_LPJ_T0018041.1 MGP_LPJ_G0015491.1 mouse_genomes_project 4 126798551 126802311 + 9930104L06Rik processed_transcript processed_transcript MGP_LPJ_T0018042.1 MGP_LPJ_G0015491.1 mouse_genomes_project 4 126802682 126803416 + 9930104L06Rik processed_transcript processed_transcript MGP_LPJ_T0018034.1 MGP_LPJ_G0015489.1 mouse_genomes_project 4 124624955 124627147 + 4933421A08Rik processed_transcript processed_transcript MGP_LPJ_T0066130.1 MGP_LPJ_G0028354.1 mouse_genomes_project 4 89506885 89514555 - MGP_LPJ_P0066130 Cdkn2a protein_coding protein_coding MGP_LPJ_T0066131.1 MGP_LPJ_G0028354.1 mouse_genomes_project 4 89506955 89527934 - MGP_LPJ_P0066131 Cdkn2a protein_coding protein_coding MGP_LPJ_T0099501.1 MGP_LPJ_G0037764.1 mouse_genomes_project 4 100459920 100460002 + Gm26425 snRNA snRNA MGP_LPJ_T0067516.1 MGP_LPJ_G0028665.1 mouse_genomes_project 4 126592951 126654361 + MGP_LPJ_P0067516 Inpp5b protein_coding protein_coding MGP_LPJ_T0067517.1 MGP_LPJ_G0028665.1 mouse_genomes_project 4 126592959 126602667 + MGP_LPJ_P0067517 Inpp5b protein_coding protein_coding MGP_LPJ_T0067518.1 MGP_LPJ_G0028665.1 mouse_genomes_project 4 126592973 126654355 + MGP_LPJ_P0067518 Inpp5b protein_coding nonsense_mediated_decay MGP_LPJ_T0067519.1 MGP_LPJ_G0028665.1 mouse_genomes_project 4 126592979 126602629 + MGP_LPJ_P0067519 Inpp5b protein_coding protein_coding MGP_LPJ_T0067520.1 MGP_LPJ_G0028665.1 mouse_genomes_project 4 126620108 126633231 + Inpp5b protein_coding processed_transcript MGP_LPJ_T0067521.1 MGP_LPJ_G0028665.1 mouse_genomes_project 4 126620214 126633284 + Inpp5b protein_coding processed_transcript MGP_LPJ_T0067522.1 MGP_LPJ_G0028665.1 mouse_genomes_project 4 126647286 126649971 + Inpp5b protein_coding processed_transcript MGP_LPJ_T0067523.1 MGP_LPJ_G0028665.1 mouse_genomes_project 4 126652397 126653960 + Inpp5b protein_coding processed_transcript MGP_LPJ_T0068031.1 MGP_LPJ_G0028773.1 mouse_genomes_project 4 134196861 134212712 - MGP_LPJ_P0068031 Epb41 protein_coding protein_coding MGP_LPJ_T0068032.1 MGP_LPJ_G0028773.1 mouse_genomes_project 4 134196864 134212749 - Epb41 protein_coding processed_transcript MGP_LPJ_T0068033.1 MGP_LPJ_G0028773.1 mouse_genomes_project 4 134196864 134356579 - Epb41 protein_coding processed_transcript MGP_LPJ_T0068034.1 MGP_LPJ_G0028773.1 mouse_genomes_project 4 134196864 134244576 - MGP_LPJ_P0068034 Epb41 protein_coding protein_coding MGP_LPJ_T0068035.1 MGP_LPJ_G0028773.1 mouse_genomes_project 4 134196864 134287197 - MGP_LPJ_P0068035 Epb41 protein_coding protein_coding MGP_LPJ_T0068036.1 MGP_LPJ_G0028773.1 mouse_genomes_project 4 134196864 134283558 - MGP_LPJ_P0068036 Epb41 protein_coding protein_coding MGP_LPJ_T0068037.1 MGP_LPJ_G0028773.1 mouse_genomes_project 4 134196864 134356550 - MGP_LPJ_P0068037 Epb41 protein_coding protein_coding MGP_LPJ_T0068038.1 MGP_LPJ_G0028773.1 mouse_genomes_project 4 134196864 134244545 - MGP_LPJ_P0068038 Epb41 protein_coding protein_coding MGP_LPJ_T0068039.1 MGP_LPJ_G0028773.1 mouse_genomes_project 4 134196864 134287198 - MGP_LPJ_P0068039 Epb41 protein_coding protein_coding MGP_LPJ_T0068040.1 MGP_LPJ_G0028773.1 mouse_genomes_project 4 134196864 134356550 - MGP_LPJ_P0068040 Epb41 protein_coding protein_coding MGP_LPJ_T0068041.1 MGP_LPJ_G0028773.1 mouse_genomes_project 4 134196879 134330455 - MGP_LPJ_P0068041 Epb41 protein_coding protein_coding MGP_LPJ_T0068042.1 MGP_LPJ_G0028773.1 mouse_genomes_project 4 134196879 134353381 - MGP_LPJ_P0068042 Epb41 protein_coding protein_coding MGP_LPJ_T0068043.1 MGP_LPJ_G0028773.1 mouse_genomes_project 4 134196879 134330455 - MGP_LPJ_P0068043 Epb41 protein_coding protein_coding MGP_LPJ_T0068044.1 MGP_LPJ_G0028773.1 mouse_genomes_project 4 134197579 134353381 - Epb41 protein_coding processed_transcript MGP_LPJ_T0068045.1 MGP_LPJ_G0028773.1 mouse_genomes_project 4 134199964 134287191 - MGP_LPJ_P0068045 Epb41 protein_coding protein_coding MGP_LPJ_T0068046.1 MGP_LPJ_G0028773.1 mouse_genomes_project 4 134232461 134290390 - MGP_LPJ_P0068046 Epb41 protein_coding unknown_likely_coding MGP_LPJ_T0068047.1 MGP_LPJ_G0028773.1 mouse_genomes_project 4 134234571 134330468 - MGP_LPJ_P0068047 Epb41 protein_coding protein_coding MGP_LPJ_T0068048.1 MGP_LPJ_G0028773.1 mouse_genomes_project 4 134267480 134280054 - Epb41 protein_coding processed_transcript MGP_LPJ_T0068049.1 MGP_LPJ_G0028773.1 mouse_genomes_project 4 134283539 134356522 - Epb41 protein_coding processed_transcript MGP_LPJ_T0014780.1 MGP_LPJ_G0012871.1 mouse_genomes_project 4 153612757 153612898 - processed_pseudogene processed_pseudogene MGP_LPJ_T0069076.1 MGP_LPJ_G0029032.1 mouse_genomes_project 4 152307051 152324766 - MGP_LPJ_P0069076 Tardbp protein_coding protein_coding MGP_LPJ_T0069077.1 MGP_LPJ_G0029032.1 mouse_genomes_project 4 152307051 152324766 - MGP_LPJ_P0069077 Tardbp protein_coding protein_coding MGP_LPJ_T0069078.1 MGP_LPJ_G0029032.1 mouse_genomes_project 4 152307056 152324532 - MGP_LPJ_P0069078 Tardbp protein_coding nonsense_mediated_decay MGP_LPJ_T0069079.1 MGP_LPJ_G0029032.1 mouse_genomes_project 4 152307057 152310795 - Tardbp protein_coding processed_transcript MGP_LPJ_T0069080.1 MGP_LPJ_G0029032.1 mouse_genomes_project 4 152307057 152316504 - MGP_LPJ_P0069080 Tardbp protein_coding protein_coding MGP_LPJ_T0069081.1 MGP_LPJ_G0029032.1 mouse_genomes_project 4 152310575 152324535 - MGP_LPJ_P0069081 Tardbp protein_coding nonsense_mediated_decay MGP_LPJ_T0069082.1 MGP_LPJ_G0029032.1 mouse_genomes_project 4 152314861 152324524 - MGP_LPJ_P0069082 Tardbp protein_coding protein_coding MGP_LPJ_T0069083.1 MGP_LPJ_G0029032.1 mouse_genomes_project 4 152314873 152318349 - MGP_LPJ_P0069083 Tardbp protein_coding protein_coding MGP_LPJ_T0069084.1 MGP_LPJ_G0029032.1 mouse_genomes_project 4 152315358 152323136 - MGP_LPJ_P0069084 Tardbp protein_coding protein_coding MGP_LPJ_T0069085.1 MGP_LPJ_G0029032.1 mouse_genomes_project 4 152315358 152323136 - MGP_LPJ_P0069085 Tardbp protein_coding protein_coding MGP_LPJ_T0069086.1 MGP_LPJ_G0029032.1 mouse_genomes_project 4 152315358 152323136 - MGP_LPJ_P0069086 Tardbp protein_coding protein_coding MGP_LPJ_T0069087.1 MGP_LPJ_G0029032.1 mouse_genomes_project 4 152315358 152324528 - MGP_LPJ_P0069087 Tardbp protein_coding nonsense_mediated_decay MGP_LPJ_T0069088.1 MGP_LPJ_G0029032.1 mouse_genomes_project 4 152315767 152324540 - MGP_LPJ_P0069088 Tardbp protein_coding nonsense_mediated_decay MGP_LPJ_T0069089.1 MGP_LPJ_G0029032.1 mouse_genomes_project 4 152316337 152324524 - MGP_LPJ_P0069089 Tardbp protein_coding protein_coding MGP_LPJ_T0069090.1 MGP_LPJ_G0029032.1 mouse_genomes_project 4 152318424 152324096 - MGP_LPJ_P0069090 Tardbp protein_coding protein_coding MGP_LPJ_T0069091.1 MGP_LPJ_G0029032.1 mouse_genomes_project 4 152322858 152324528 - Tardbp protein_coding retained_intron MGP_LPJ_T0014644.1 MGP_LPJ_G0012735.1 mouse_genomes_project 4 105692636 105692904 - processed_pseudogene processed_pseudogene MGP_LPJ_T0064785.1 MGP_LPJ_G0028036.1 mouse_genomes_project 4 30363361 30364493 + MGP_LPJ_P0064785 Lyrm2 protein_coding protein_coding MGP_LPJ_T0064786.1 MGP_LPJ_G0028036.1 mouse_genomes_project 4 30363387 30364669 + Lyrm2 protein_coding retained_intron MGP_LPJ_T0064787.1 MGP_LPJ_G0028036.1 mouse_genomes_project 4 30363390 30364085 + Lyrm2 protein_coding retained_intron MGP_LPJ_T0014396.1 MGP_LPJ_G0012487.1 mouse_genomes_project 4 15864582 15868828 - processed_pseudogene processed_pseudogene MGP_LPJ_T0066119.1 MGP_LPJ_G0028344.1 mouse_genomes_project 4 88911956 88913014 - MGP_LPJ_P0066119 Ifnab protein_coding protein_coding MGP_LPJ_T0064754.1 MGP_LPJ_G0028031.1 mouse_genomes_project 4 29495039 29554296 + MGP_LPJ_P0064754 Map3k7 protein_coding protein_coding MGP_LPJ_T0064755.1 MGP_LPJ_G0028031.1 mouse_genomes_project 4 29495182 29554302 + MGP_LPJ_P0064755 Map3k7 protein_coding protein_coding MGP_LPJ_T0064756.1 MGP_LPJ_G0028031.1 mouse_genomes_project 4 29508627 29518473 + Map3k7 protein_coding processed_transcript MGP_LPJ_T0064757.1 MGP_LPJ_G0028031.1 mouse_genomes_project 4 29511588 29516351 + Map3k7 protein_coding processed_transcript MGP_LPJ_T0064758.1 MGP_LPJ_G0028031.1 mouse_genomes_project 4 29513659 29522491 + Map3k7 protein_coding processed_transcript MGP_LPJ_T0064759.1 MGP_LPJ_G0028031.1 mouse_genomes_project 4 29516296 29546976 + Map3k7 protein_coding processed_transcript MGP_LPJ_T0064760.1 MGP_LPJ_G0028031.1 mouse_genomes_project 4 29522188 29550528 + Map3k7 protein_coding processed_transcript MGP_LPJ_T0014427.1 MGP_LPJ_G0012518.1 mouse_genomes_project 4 25396663 25396986 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014448.1 MGP_LPJ_G0012539.1 mouse_genomes_project 4 30638549 30638996 - processed_pseudogene processed_pseudogene MGP_LPJ_T0068680.1 MGP_LPJ_G0028918.1 mouse_genomes_project 4 141848244 141849493 + MGP_LPJ_P0068680 Rnf186 protein_coding protein_coding MGP_LPJ_T0068746.1 MGP_LPJ_G0028936.1 mouse_genomes_project 4 143494498 143641421 - MGP_LPJ_P0068746 Arhgef10l protein_coding protein_coding MGP_LPJ_T0068747.1 MGP_LPJ_G0028936.1 mouse_genomes_project 4 143494498 143568542 - MGP_LPJ_P0068747 Arhgef10l protein_coding protein_coding MGP_LPJ_T0068748.1 MGP_LPJ_G0028936.1 mouse_genomes_project 4 143494498 143566016 - MGP_LPJ_P0068748 Arhgef10l protein_coding protein_coding MGP_LPJ_T0068749.1 MGP_LPJ_G0028936.1 mouse_genomes_project 4 143494498 143661184 - MGP_LPJ_P0068749 Arhgef10l protein_coding protein_coding MGP_LPJ_T0068750.1 MGP_LPJ_G0028936.1 mouse_genomes_project 4 143494498 143641427 - MGP_LPJ_P0068750 Arhgef10l protein_coding protein_coding MGP_LPJ_T0068751.1 MGP_LPJ_G0028936.1 mouse_genomes_project 4 143494498 143561292 - MGP_LPJ_P0068751 Arhgef10l protein_coding nonsense_mediated_decay MGP_LPJ_T0068752.1 MGP_LPJ_G0028936.1 mouse_genomes_project 4 143494498 143641421 - MGP_LPJ_P0068752 Arhgef10l protein_coding protein_coding MGP_LPJ_T0068753.1 MGP_LPJ_G0028936.1 mouse_genomes_project 4 143524323 143552556 - MGP_LPJ_P0068753 Arhgef10l protein_coding nonsense_mediated_decay MGP_LPJ_T0068754.1 MGP_LPJ_G0028936.1 mouse_genomes_project 4 143559623 143566000 - MGP_LPJ_P0068754 Arhgef10l protein_coding protein_coding MGP_LPJ_T0068755.1 MGP_LPJ_G0028936.1 mouse_genomes_project 4 143565062 143578020 - Arhgef10l protein_coding retained_intron MGP_LPJ_T0068756.1 MGP_LPJ_G0028936.1 mouse_genomes_project 4 143577911 143642031 - MGP_LPJ_P0068756 Arhgef10l protein_coding protein_coding MGP_LPJ_T0068757.1 MGP_LPJ_G0028936.1 mouse_genomes_project 4 143579148 143603642 - MGP_LPJ_P0068757 Arhgef10l protein_coding protein_coding MGP_LPJ_T0068953.1 MGP_LPJ_G0028998.1 mouse_genomes_project 4 147955224 147966278 + MGP_LPJ_P0068953 9430007A20Rik protein_coding protein_coding MGP_LPJ_T0007841.1 MGP_LPJ_G0006410.1 mouse_genomes_project 4 35041053 35125337 + Gm12374 lincRNA lincRNA MGP_LPJ_T0065006.1 MGP_LPJ_G0028093.1 mouse_genomes_project 4 39779516 39788404 - MGP_LPJ_P0065006 Arid3c protein_coding protein_coding MGP_LPJ_T0065007.1 MGP_LPJ_G0028093.1 mouse_genomes_project 4 39779819 39785967 - MGP_LPJ_P0065007 Arid3c protein_coding protein_coding MGP_LPJ_T0065008.1 MGP_LPJ_G0028093.1 mouse_genomes_project 4 39779819 39785967 - MGP_LPJ_P0065008 Arid3c protein_coding protein_coding MGP_LPJ_T0065009.1 MGP_LPJ_G0028093.1 mouse_genomes_project 4 39785606 39788404 - MGP_LPJ_P0065009 Arid3c protein_coding protein_coding MGP_LPJ_T0014681.1 MGP_LPJ_G0012772.1 mouse_genomes_project 4 118146029 118146669 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014593.1 MGP_LPJ_G0012684.1 mouse_genomes_project 4 87770839 87771961 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007839.1 MGP_LPJ_G0006408.1 mouse_genomes_project 4 31790092 31794039 + Gm12753 lincRNA lincRNA MGP_LPJ_T0068211.1 MGP_LPJ_G0028813.1 mouse_genomes_project 4 135999407 136028453 - MGP_LPJ_P0068211 Zdhhc18 protein_coding protein_coding MGP_LPJ_T0068212.1 MGP_LPJ_G0028813.1 mouse_genomes_project 4 136002773 136009682 - Zdhhc18 protein_coding retained_intron MGP_LPJ_T0068213.1 MGP_LPJ_G0028813.1 mouse_genomes_project 4 136002843 136007148 - Zdhhc18 protein_coding processed_transcript MGP_LPJ_T0068214.1 MGP_LPJ_G0028813.1 mouse_genomes_project 4 136007429 136009457 - Zdhhc18 protein_coding retained_intron MGP_LPJ_T0068215.1 MGP_LPJ_G0028813.1 mouse_genomes_project 4 136022394 136044095 - Zdhhc18 protein_coding processed_transcript MGP_LPJ_T0014695.1 MGP_LPJ_G0012786.1 mouse_genomes_project 4 120826040 120826722 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098601.1 MGP_LPJ_G0036875.1 mouse_genomes_project 4 95535582 95542812 + Gm28096 sense_intronic sense_intronic MGP_LPJ_T0067049.1 MGP_LPJ_G0028549.1 mouse_genomes_project 4 117928808 117940347 + MGP_LPJ_P0067049 Mutyh protein_coding protein_coding MGP_LPJ_T0067050.1 MGP_LPJ_G0028549.1 mouse_genomes_project 4 117928810 117936572 + MGP_LPJ_P0067050 Mutyh protein_coding protein_coding MGP_LPJ_T0067051.1 MGP_LPJ_G0028549.1 mouse_genomes_project 4 117928823 117940354 + Mutyh protein_coding retained_intron MGP_LPJ_T0067052.1 MGP_LPJ_G0028549.1 mouse_genomes_project 4 117928833 117939688 + Mutyh protein_coding retained_intron MGP_LPJ_T0067053.1 MGP_LPJ_G0028549.1 mouse_genomes_project 4 117935234 117940299 + MGP_LPJ_P0067053 Mutyh protein_coding nonsense_mediated_decay MGP_LPJ_T0067054.1 MGP_LPJ_G0028549.1 mouse_genomes_project 4 117935292 117937955 + Mutyh protein_coding retained_intron MGP_LPJ_T0067055.1 MGP_LPJ_G0028549.1 mouse_genomes_project 4 117938613 117940356 + Mutyh protein_coding retained_intron MGP_LPJ_T0100766.1 MGP_LPJ_G0039029.1 mouse_genomes_project 4 62075130 62075263 + Gm24117 snoRNA snoRNA MGP_LPJ_T0067262.1 MGP_LPJ_G0028597.1 mouse_genomes_project 4 120196873 120197815 - MGP_LPJ_P0067262 protein_coding protein_coding MGP_LPJ_T0069195.1 MGP_LPJ_G0029052.1 mouse_genomes_project 4 153942754 153961396 + MGP_LPJ_P0069195 Gpr157 protein_coding protein_coding MGP_LPJ_T0065422.1 MGP_LPJ_G0028167.1 mouse_genomes_project 4 44450794 44476702 - MGP_LPJ_P0065422 Tstd2 protein_coding protein_coding MGP_LPJ_T0065423.1 MGP_LPJ_G0028167.1 mouse_genomes_project 4 44451731 44476665 - MGP_LPJ_P0065423 Tstd2 protein_coding protein_coding MGP_LPJ_T0065424.1 MGP_LPJ_G0028167.1 mouse_genomes_project 4 44452844 44476654 - MGP_LPJ_P0065424 Tstd2 protein_coding unknown_likely_coding MGP_LPJ_T0065425.1 MGP_LPJ_G0028167.1 mouse_genomes_project 4 44459408 44476640 - Tstd2 protein_coding retained_intron MGP_LPJ_T0065426.1 MGP_LPJ_G0028167.1 mouse_genomes_project 4 44466036 44469320 - Tstd2 protein_coding retained_intron MGP_LPJ_T0065427.1 MGP_LPJ_G0028167.1 mouse_genomes_project 4 44469330 44476921 - MGP_LPJ_P0065427 Tstd2 protein_coding protein_coding MGP_LPJ_T0065428.1 MGP_LPJ_G0028167.1 mouse_genomes_project 4 44469393 44476636 - MGP_LPJ_P0065428 Tstd2 protein_coding protein_coding MGP_LPJ_T0065429.1 MGP_LPJ_G0028167.1 mouse_genomes_project 4 44469542 44474010 - MGP_LPJ_P0065429 Tstd2 protein_coding protein_coding MGP_LPJ_T0065430.1 MGP_LPJ_G0028167.1 mouse_genomes_project 4 44473733 44476682 - MGP_LPJ_P0065430 Tstd2 protein_coding protein_coding MGP_LPJ_T0069630.1 MGP_LPJ_G0029131.1 mouse_genomes_project 4 160083377 160086111 + MGP_LPJ_P0069630 Ankrd65 protein_coding protein_coding MGP_LPJ_T0069631.1 MGP_LPJ_G0029131.1 mouse_genomes_project 4 160084110 160092454 + MGP_LPJ_P0069631 Ankrd65 protein_coding protein_coding MGP_LPJ_T0014728.1 MGP_LPJ_G0012819.1 mouse_genomes_project 4 129332583 129333265 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004593.1 MGP_LPJ_G0003990.1 mouse_genomes_project 4 144470491 144486285 + Gm13075 antisense antisense MGP_LPJ_T0004594.1 MGP_LPJ_G0003990.1 mouse_genomes_project 4 144470519 144487250 + Gm13075 antisense antisense MGP_LPJ_T0064606.1 MGP_LPJ_G0027989.1 mouse_genomes_project 4 10610503 10763172 + MGP_LPJ_P0064606 Runx1t1 protein_coding protein_coding MGP_LPJ_T0064607.1 MGP_LPJ_G0027989.1 mouse_genomes_project 4 10618365 10712560 + Runx1t1 protein_coding processed_transcript MGP_LPJ_T0064608.1 MGP_LPJ_G0027989.1 mouse_genomes_project 4 10618365 10763151 + MGP_LPJ_P0064608 Runx1t1 protein_coding protein_coding MGP_LPJ_T0064609.1 MGP_LPJ_G0027989.1 mouse_genomes_project 4 10637673 10759849 + MGP_LPJ_P0064609 Runx1t1 protein_coding protein_coding MGP_LPJ_T0064610.1 MGP_LPJ_G0027989.1 mouse_genomes_project 4 10651092 10760642 + MGP_LPJ_P0064610 Runx1t1 protein_coding protein_coding MGP_LPJ_T0064611.1 MGP_LPJ_G0027989.1 mouse_genomes_project 4 10758745 10759488 + Runx1t1 protein_coding processed_transcript MGP_LPJ_T0008047.1 MGP_LPJ_G0006570.1 mouse_genomes_project 4 158849110 158849729 - Gm27202 lincRNA lincRNA MGP_LPJ_T0004578.1 MGP_LPJ_G0003977.1 mouse_genomes_project 4 138600653 138607482 + Gm13008 antisense antisense MGP_LPJ_T0007856.1 MGP_LPJ_G0006424.1 mouse_genomes_project 4 47412270 47479974 + lincRNA lincRNA MGP_LPJ_T0067425.1 MGP_LPJ_G0028637.1 mouse_genomes_project 4 123032039 123039685 - MGP_LPJ_P0067425 Gm12887 protein_coding protein_coding MGP_LPJ_T0014529.1 MGP_LPJ_G0012620.1 mouse_genomes_project 4 58064040 58064785 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098603.1 MGP_LPJ_G0036877.1 mouse_genomes_project 4 109504897 109507944 + Gm12737 sense_intronic sense_intronic MGP_LPJ_T0099506.1 MGP_LPJ_G0037769.1 mouse_genomes_project 4 109441458 109441565 - Gm24967 snRNA snRNA MGP_LPJ_T0067557.1 MGP_LPJ_G0028676.1 mouse_genomes_project 4 126953552 126983036 + MGP_LPJ_P0067557 Meaf6 protein_coding protein_coding MGP_LPJ_T0067558.1 MGP_LPJ_G0028676.1 mouse_genomes_project 4 126953569 126979701 + MGP_LPJ_P0067558 Meaf6 protein_coding protein_coding MGP_LPJ_T0067559.1 MGP_LPJ_G0028676.1 mouse_genomes_project 4 126953582 126979526 + MGP_LPJ_P0067559 Meaf6 protein_coding nonsense_mediated_decay MGP_LPJ_T0067560.1 MGP_LPJ_G0028676.1 mouse_genomes_project 4 126953583 126958579 + Meaf6 protein_coding processed_transcript MGP_LPJ_T0067561.1 MGP_LPJ_G0028676.1 mouse_genomes_project 4 126953679 126979264 + MGP_LPJ_P0067561 Meaf6 protein_coding protein_coding MGP_LPJ_T0067562.1 MGP_LPJ_G0028676.1 mouse_genomes_project 4 126954606 126979269 + MGP_LPJ_P0067562 Meaf6 protein_coding nonsense_mediated_decay MGP_LPJ_T0067563.1 MGP_LPJ_G0028676.1 mouse_genomes_project 4 126958316 126971887 + Meaf6 protein_coding processed_transcript MGP_LPJ_T0067564.1 MGP_LPJ_G0028676.1 mouse_genomes_project 4 126977795 126979240 + Meaf6 protein_coding retained_intron MGP_LPJ_T0014495.1 MGP_LPJ_G0012586.1 mouse_genomes_project 4 47867442 47868448 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008032.1 MGP_LPJ_G0006555.1 mouse_genomes_project 4 144983064 144984452 + Gm29367 lincRNA lincRNA MGP_LPJ_T0007824.1 MGP_LPJ_G0006394.1 mouse_genomes_project 4 10799074 10877782 - Gm11823 lincRNA lincRNA MGP_LPJ_T0066078.1 MGP_LPJ_G0028331.1 mouse_genomes_project 4 87133642 87407248 - MGP_LPJ_P0066078 Slc24a2 protein_coding protein_coding MGP_LPJ_T0066079.1 MGP_LPJ_G0028331.1 mouse_genomes_project 4 87133647 87404752 - MGP_LPJ_P0066079 Slc24a2 protein_coding protein_coding MGP_LPJ_T0066080.1 MGP_LPJ_G0028331.1 mouse_genomes_project 4 87141704 87404662 - MGP_LPJ_P0066080 Slc24a2 protein_coding protein_coding MGP_LPJ_T0066081.1 MGP_LPJ_G0028331.1 mouse_genomes_project 4 87141704 87404666 - MGP_LPJ_P0066081 Slc24a2 protein_coding protein_coding MGP_LPJ_T0066082.1 MGP_LPJ_G0028331.1 mouse_genomes_project 4 87146691 87165034 - Slc24a2 protein_coding processed_transcript MGP_LPJ_T0066083.1 MGP_LPJ_G0028331.1 mouse_genomes_project 4 87183660 87338294 - MGP_LPJ_P0066083 Slc24a2 protein_coding protein_coding MGP_LPJ_T0066084.1 MGP_LPJ_G0028331.1 mouse_genomes_project 4 87230444 87407194 - Slc24a2 protein_coding processed_transcript MGP_LPJ_T0066085.1 MGP_LPJ_G0028331.1 mouse_genomes_project 4 87230832 87407193 - Slc24a2 protein_coding processed_transcript MGP_LPJ_T0066086.1 MGP_LPJ_G0028331.1 mouse_genomes_project 4 87337793 87407238 - Slc24a2 protein_coding processed_transcript MGP_LPJ_T0014526.1 MGP_LPJ_G0012617.1 mouse_genomes_project 4 56358453 56360442 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010612.1 MGP_LPJ_G0008730.1 mouse_genomes_project 4 42857613 42857691 - Mir5120 miRNA miRNA MGP_LPJ_T0067964.1 MGP_LPJ_G0028759.1 mouse_genomes_project 4 132578794 132602407 - MGP_LPJ_P0067964 Serinc2 protein_coding protein_coding MGP_LPJ_T0067965.1 MGP_LPJ_G0028759.1 mouse_genomes_project 4 132578794 132602039 - MGP_LPJ_P0067965 Serinc2 protein_coding protein_coding MGP_LPJ_T0067966.1 MGP_LPJ_G0028759.1 mouse_genomes_project 4 132579198 132606058 - MGP_LPJ_P0067966 Serinc2 protein_coding protein_coding MGP_LPJ_T0067967.1 MGP_LPJ_G0028759.1 mouse_genomes_project 4 132589858 132602353 - MGP_LPJ_P0067967 Serinc2 protein_coding protein_coding MGP_LPJ_T0067968.1 MGP_LPJ_G0028759.1 mouse_genomes_project 4 132590473 132602366 - MGP_LPJ_P0067968 Serinc2 protein_coding protein_coding MGP_LPJ_T0014761.1 MGP_LPJ_G0012852.1 mouse_genomes_project 4 145098249 145098814 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014380.1 MGP_LPJ_G0012471.1 mouse_genomes_project 4 12570106 12570430 + processed_pseudogene processed_pseudogene MGP_LPJ_T0066117.1 MGP_LPJ_G0028342.1 mouse_genomes_project 4 88892772 88893706 - MGP_LPJ_P0066117 Ifna16 protein_coding protein_coding MGP_LPJ_T0068718.1 MGP_LPJ_G0028927.1 mouse_genomes_project 4 142258512 142285469 + MGP_LPJ_P0068718 Emc1 protein_coding protein_coding MGP_LPJ_T0068719.1 MGP_LPJ_G0028927.1 mouse_genomes_project 4 142258518 142285469 + MGP_LPJ_P0068719 Emc1 protein_coding protein_coding MGP_LPJ_T0068720.1 MGP_LPJ_G0028927.1 mouse_genomes_project 4 142258518 142285469 + MGP_LPJ_P0068720 Emc1 protein_coding protein_coding MGP_LPJ_T0068721.1 MGP_LPJ_G0028927.1 mouse_genomes_project 4 142258534 142260390 + Emc1 protein_coding processed_transcript MGP_LPJ_T0068723.1 MGP_LPJ_G0028927.1 mouse_genomes_project 4 142266058 142282666 + Emc1 protein_coding processed_transcript MGP_LPJ_T0014459.1 MGP_LPJ_G0012550.1 mouse_genomes_project 4 33745098 33746040 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014497.1 MGP_LPJ_G0012588.1 mouse_genomes_project 4 48305980 48306496 - processed_pseudogene processed_pseudogene MGP_LPJ_T0068941.1 MGP_LPJ_G0028987.1 mouse_genomes_project 4 147078198 147081601 + MGP_LPJ_P0068941 protein_coding protein_coding MGP_LPJ_T0067057.1 MGP_LPJ_G0028551.1 mouse_genomes_project 4 118002636 118118040 + MGP_LPJ_P0067057 Zswim5 protein_coding protein_coding MGP_LPJ_T0102165.1 MGP_LPJ_G0040202.1 mouse_genomes_project 4 124430489 124449323 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0100777.1 MGP_LPJ_G0039040.1 mouse_genomes_project 4 81238786 81238917 - Gm25803 snoRNA snoRNA MGP_LPJ_T0066903.1 MGP_LPJ_G0028522.1 mouse_genomes_project 4 116889573 116897671 + MGP_LPJ_P0066903 Mob3c protein_coding protein_coding MGP_LPJ_T0066904.1 MGP_LPJ_G0028522.1 mouse_genomes_project 4 116889578 116893197 + Mob3c protein_coding retained_intron MGP_LPJ_T0066905.1 MGP_LPJ_G0028522.1 mouse_genomes_project 4 116890139 116893027 + MGP_LPJ_P0066905 Mob3c protein_coding protein_coding MGP_LPJ_T0065092.1 MGP_LPJ_G0028110.1 mouse_genomes_project 4 41167146 41175019 - MGP_LPJ_P0065092 Pigo protein_coding unknown_likely_coding MGP_LPJ_T0065093.1 MGP_LPJ_G0028110.1 mouse_genomes_project 4 41167148 41174594 - MGP_LPJ_P0065093 Pigo protein_coding protein_coding MGP_LPJ_T0065094.1 MGP_LPJ_G0028110.1 mouse_genomes_project 4 41167148 41175333 - MGP_LPJ_P0065094 Pigo protein_coding protein_coding MGP_LPJ_T0065095.1 MGP_LPJ_G0028110.1 mouse_genomes_project 4 41167148 41175270 - MGP_LPJ_P0065095 Pigo protein_coding protein_coding MGP_LPJ_T0065096.1 MGP_LPJ_G0028110.1 mouse_genomes_project 4 41167420 41169220 - Pigo protein_coding processed_transcript MGP_LPJ_T0065097.1 MGP_LPJ_G0028110.1 mouse_genomes_project 4 41174216 41174981 - Pigo protein_coding processed_transcript MGP_LPJ_T0066398.1 MGP_LPJ_G0028417.1 mouse_genomes_project 4 103712307 103717122 - MGP_LPJ_P0066398 Insl5 protein_coding protein_coding MGP_LPJ_T0066399.1 MGP_LPJ_G0028417.1 mouse_genomes_project 4 103712549 103717227 - MGP_LPJ_P0066399 Insl5 protein_coding protein_coding MGP_LPJ_T0066331.1 MGP_LPJ_G0028403.1 mouse_genomes_project 4 101652625 101734954 + MGP_LPJ_P0066331 Raver2 protein_coding protein_coding MGP_LPJ_T0066332.1 MGP_LPJ_G0028403.1 mouse_genomes_project 4 101652625 101717942 + MGP_LPJ_P0066332 Raver2 protein_coding protein_coding MGP_LPJ_T0066333.1 MGP_LPJ_G0028403.1 mouse_genomes_project 4 101653121 101689437 + Raver2 protein_coding processed_transcript MGP_LPJ_T0004548.1 MGP_LPJ_G0003954.1 mouse_genomes_project 4 124790563 124791546 - Gm12923 antisense antisense MGP_LPJ_T0100745.1 MGP_LPJ_G0039008.1 mouse_genomes_project 4 37225197 37225323 + Gm23607 snoRNA snoRNA MGP_LPJ_T0067725.1 MGP_LPJ_G0028717.1 mouse_genomes_project 4 130790151 130895948 + MGP_LPJ_P0067725 Phc2 protein_coding protein_coding MGP_LPJ_T0067726.1 MGP_LPJ_G0028717.1 mouse_genomes_project 4 130790187 130851671 + MGP_LPJ_P0067726 Phc2 protein_coding protein_coding MGP_LPJ_T0067727.1 MGP_LPJ_G0028717.1 mouse_genomes_project 4 130826134 130845122 + Phc2 protein_coding retained_intron MGP_LPJ_T0067728.1 MGP_LPJ_G0028717.1 mouse_genomes_project 4 130826191 130895948 + MGP_LPJ_P0067728 Phc2 protein_coding protein_coding MGP_LPJ_T0067729.1 MGP_LPJ_G0028717.1 mouse_genomes_project 4 130849640 130866628 + Phc2 protein_coding retained_intron MGP_LPJ_T0067730.1 MGP_LPJ_G0028717.1 mouse_genomes_project 4 130869782 130895948 + MGP_LPJ_P0067730 Phc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0067731.1 MGP_LPJ_G0028717.1 mouse_genomes_project 4 130869786 130895948 + MGP_LPJ_P0067731 Phc2 protein_coding protein_coding MGP_LPJ_T0067732.1 MGP_LPJ_G0028717.1 mouse_genomes_project 4 130869883 130891284 + MGP_LPJ_P0067732 Phc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0067733.1 MGP_LPJ_G0028717.1 mouse_genomes_project 4 130869911 130888075 + MGP_LPJ_P0067733 Phc2 protein_coding protein_coding MGP_LPJ_T0067734.1 MGP_LPJ_G0028717.1 mouse_genomes_project 4 130870134 130891141 + MGP_LPJ_P0067734 Phc2 protein_coding protein_coding MGP_LPJ_T0067735.1 MGP_LPJ_G0028717.1 mouse_genomes_project 4 130870172 130886538 + MGP_LPJ_P0067735 Phc2 protein_coding protein_coding MGP_LPJ_T0067736.1 MGP_LPJ_G0028717.1 mouse_genomes_project 4 130870183 130890199 + MGP_LPJ_P0067736 Phc2 protein_coding protein_coding MGP_LPJ_T0014442.1 MGP_LPJ_G0012533.1 mouse_genomes_project 4 29678401 29678838 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007975.1 MGP_LPJ_G0006515.1 mouse_genomes_project 4 131215051 131224253 - 1700086P04Rik lincRNA lincRNA MGP_LPJ_T0014607.1 MGP_LPJ_G0012698.1 mouse_genomes_project 4 91984680 91986014 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014502.1 MGP_LPJ_G0012593.1 mouse_genomes_project 4 50914995 50915615 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010625.1 MGP_LPJ_G0008743.1 mouse_genomes_project 4 95046363 95046444 + Mir872 miRNA miRNA MGP_LPJ_T0004598.1 MGP_LPJ_G0003993.1 mouse_genomes_project 4 144994764 145011982 + Fhad1os2 antisense antisense MGP_LPJ_T0014513.1 MGP_LPJ_G0012604.1 mouse_genomes_project 4 53001022 53001229 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007858.1 MGP_LPJ_G0006426.1 mouse_genomes_project 4 51988428 51997305 - AI427809 lincRNA lincRNA MGP_LPJ_T0007859.1 MGP_LPJ_G0006426.1 mouse_genomes_project 4 51988965 51989620 - AI427809 lincRNA lincRNA MGP_LPJ_T0007860.1 MGP_LPJ_G0006426.1 mouse_genomes_project 4 51989527 51992565 - AI427809 lincRNA lincRNA MGP_LPJ_T0007861.1 MGP_LPJ_G0006426.1 mouse_genomes_project 4 51989804 51990904 - AI427809 lincRNA lincRNA MGP_LPJ_T0007823.1 MGP_LPJ_G0006393.1 mouse_genomes_project 4 9917795 9939606 + Gm11820 lincRNA lincRNA MGP_LPJ_T0065748.1 MGP_LPJ_G0028257.1 mouse_genomes_project 4 61282273 61403574 - MGP_LPJ_P0065748 Mup21 protein_coding protein_coding MGP_LPJ_T0069339.1 MGP_LPJ_G0029079.1 mouse_genomes_project 4 156306103 156321371 + MGP_LPJ_P0069339 Gpr153 protein_coding protein_coding MGP_LPJ_T0069340.1 MGP_LPJ_G0029079.1 mouse_genomes_project 4 156308416 156321371 + MGP_LPJ_P0069340 Gpr153 protein_coding protein_coding MGP_LPJ_T0069341.1 MGP_LPJ_G0029079.1 mouse_genomes_project 4 156315046 156321371 + MGP_LPJ_P0069341 Gpr153 protein_coding protein_coding MGP_LPJ_T0069342.1 MGP_LPJ_G0029079.1 mouse_genomes_project 4 156318403 156321370 + Gpr153 protein_coding processed_transcript MGP_LPJ_T0014479.1 MGP_LPJ_G0012570.1 mouse_genomes_project 4 42556406 42557038 - processed_pseudogene processed_pseudogene MGP_LPJ_T0067538.1 MGP_LPJ_G0028670.1 mouse_genomes_project 4 126734249 126741084 + MGP_LPJ_P0067538 Epha10 protein_coding protein_coding MGP_LPJ_T0067539.1 MGP_LPJ_G0028670.1 mouse_genomes_project 4 126739952 126776530 + MGP_LPJ_P0067539 Epha10 protein_coding protein_coding MGP_LPJ_T0066837.1 MGP_LPJ_G0028497.1 mouse_genomes_project 4 113132996 113156564 + MGP_LPJ_P0066837 Skint1 protein_coding protein_coding MGP_LPJ_T0066838.1 MGP_LPJ_G0028497.1 mouse_genomes_project 4 113132996 113160428 + MGP_LPJ_P0066838 Skint1 protein_coding protein_coding MGP_LPJ_T0066839.1 MGP_LPJ_G0028497.1 mouse_genomes_project 4 113132996 113156564 + MGP_LPJ_P0066839 Skint1 protein_coding protein_coding MGP_LPJ_T0066840.1 MGP_LPJ_G0028497.1 mouse_genomes_project 4 113132996 113150909 + MGP_LPJ_P0066840 Skint1 protein_coding protein_coding MGP_LPJ_T0066841.1 MGP_LPJ_G0028497.1 mouse_genomes_project 4 113133009 113143220 + Skint1 protein_coding retained_intron MGP_LPJ_T0018058.1 MGP_LPJ_G0015499.1 mouse_genomes_project 4 156465162 156468714 - Gm16334 processed_transcript processed_transcript MGP_LPJ_T0066806.1 MGP_LPJ_G0028493.1 mouse_genomes_project 4 112853701 112970736 + MGP_LPJ_P0066806 Spata6 protein_coding protein_coding MGP_LPJ_T0066807.1 MGP_LPJ_G0028493.1 mouse_genomes_project 4 112853726 112903022 + MGP_LPJ_P0066807 Spata6 protein_coding protein_coding MGP_LPJ_T0066808.1 MGP_LPJ_G0028493.1 mouse_genomes_project 4 112853727 112945855 + Spata6 protein_coding processed_transcript MGP_LPJ_T0066809.1 MGP_LPJ_G0028493.1 mouse_genomes_project 4 112853755 112914965 + MGP_LPJ_P0066809 Spata6 protein_coding protein_coding MGP_LPJ_T0066810.1 MGP_LPJ_G0028493.1 mouse_genomes_project 4 112853776 112903082 + Spata6 protein_coding processed_transcript MGP_LPJ_T0066811.1 MGP_LPJ_G0028493.1 mouse_genomes_project 4 112853780 112915685 + Spata6 protein_coding processed_transcript MGP_LPJ_T0066812.1 MGP_LPJ_G0028493.1 mouse_genomes_project 4 112853820 112916270 + Spata6 protein_coding processed_transcript MGP_LPJ_T0066813.1 MGP_LPJ_G0028493.1 mouse_genomes_project 4 112853846 112915735 + Spata6 protein_coding processed_transcript MGP_LPJ_T0066814.1 MGP_LPJ_G0028493.1 mouse_genomes_project 4 112853922 112970778 + MGP_LPJ_P0066814 Spata6 protein_coding protein_coding MGP_LPJ_T0066815.1 MGP_LPJ_G0028493.1 mouse_genomes_project 4 112911474 112969788 + Spata6 protein_coding processed_transcript MGP_LPJ_T0066816.1 MGP_LPJ_G0028493.1 mouse_genomes_project 4 112914235 112970728 + Spata6 protein_coding processed_transcript MGP_LPJ_T0066817.1 MGP_LPJ_G0028493.1 mouse_genomes_project 4 112914274 112916969 + Spata6 protein_coding processed_transcript MGP_LPJ_T0066818.1 MGP_LPJ_G0028493.1 mouse_genomes_project 4 112944661 112964494 + Spata6 protein_coding processed_transcript MGP_LPJ_T0066819.1 MGP_LPJ_G0028493.1 mouse_genomes_project 4 112963954 112969796 + Spata6 protein_coding processed_transcript MGP_LPJ_T0065725.1 MGP_LPJ_G0028251.1 mouse_genomes_project 4 58471459 58549400 - MGP_LPJ_P0065725 Ptbp3 protein_coding protein_coding MGP_LPJ_T0065726.1 MGP_LPJ_G0028251.1 mouse_genomes_project 4 58473083 58549271 - MGP_LPJ_P0065726 Ptbp3 protein_coding protein_coding MGP_LPJ_T0065727.1 MGP_LPJ_G0028251.1 mouse_genomes_project 4 58473135 58482954 - Ptbp3 protein_coding retained_intron MGP_LPJ_T0065728.1 MGP_LPJ_G0028251.1 mouse_genomes_project 4 58476783 58490467 - MGP_LPJ_P0065728 Ptbp3 protein_coding protein_coding MGP_LPJ_T0065729.1 MGP_LPJ_G0028251.1 mouse_genomes_project 4 58476788 58549368 - MGP_LPJ_P0065729 Ptbp3 protein_coding nonsense_mediated_decay MGP_LPJ_T0065730.1 MGP_LPJ_G0028251.1 mouse_genomes_project 4 58490370 58549373 - MGP_LPJ_P0065730 Ptbp3 protein_coding nonsense_mediated_decay MGP_LPJ_T0065731.1 MGP_LPJ_G0028251.1 mouse_genomes_project 4 58490420 58549381 - MGP_LPJ_P0065731 Ptbp3 protein_coding protein_coding MGP_LPJ_T0065732.1 MGP_LPJ_G0028251.1 mouse_genomes_project 4 58499951 58514928 - Ptbp3 protein_coding retained_intron MGP_LPJ_T0065733.1 MGP_LPJ_G0028251.1 mouse_genomes_project 4 58517598 58548853 - MGP_LPJ_P0065733 Ptbp3 protein_coding protein_coding MGP_LPJ_T0007938.1 MGP_LPJ_G0006488.1 mouse_genomes_project 4 108663157 108668670 + Gm12907 lincRNA lincRNA MGP_LPJ_T0007996.1 MGP_LPJ_G0006529.1 mouse_genomes_project 4 134557911 134561655 + Gm28874 lincRNA lincRNA MGP_LPJ_T0065833.1 MGP_LPJ_G0028281.1 mouse_genomes_project 4 62707077 62790622 - MGP_LPJ_P0065833 Whrn protein_coding protein_coding MGP_LPJ_T0065834.1 MGP_LPJ_G0028281.1 mouse_genomes_project 4 62707082 62788989 - Whrn protein_coding processed_transcript MGP_LPJ_T0065835.1 MGP_LPJ_G0028281.1 mouse_genomes_project 4 62707082 62725816 - Whrn protein_coding retained_intron MGP_LPJ_T0065836.1 MGP_LPJ_G0028281.1 mouse_genomes_project 4 62707082 62725816 - Whrn protein_coding retained_intron MGP_LPJ_T0065837.1 MGP_LPJ_G0028281.1 mouse_genomes_project 4 62707082 62791340 - MGP_LPJ_P0065837 Whrn protein_coding protein_coding MGP_LPJ_T0065838.1 MGP_LPJ_G0028281.1 mouse_genomes_project 4 62707082 62791340 - MGP_LPJ_P0065838 Whrn protein_coding protein_coding MGP_LPJ_T0065839.1 MGP_LPJ_G0028281.1 mouse_genomes_project 4 62707082 62791340 - MGP_LPJ_P0065839 Whrn protein_coding protein_coding MGP_LPJ_T0065840.1 MGP_LPJ_G0028281.1 mouse_genomes_project 4 62707082 62791340 - MGP_LPJ_P0065840 Whrn protein_coding protein_coding MGP_LPJ_T0065841.1 MGP_LPJ_G0028281.1 mouse_genomes_project 4 62711647 62724423 - MGP_LPJ_P0065841 Whrn protein_coding nonsense_mediated_decay MGP_LPJ_T0065842.1 MGP_LPJ_G0028281.1 mouse_genomes_project 4 62718202 62724496 - Whrn protein_coding processed_transcript MGP_LPJ_T0065843.1 MGP_LPJ_G0028281.1 mouse_genomes_project 4 62723926 62791380 - MGP_LPJ_P0065843 Whrn protein_coding protein_coding MGP_LPJ_T0065844.1 MGP_LPJ_G0028281.1 mouse_genomes_project 4 62727294 62756737 - Whrn protein_coding retained_intron MGP_LPJ_T0065845.1 MGP_LPJ_G0028281.1 mouse_genomes_project 4 62728722 62768173 - MGP_LPJ_P0065845 Whrn protein_coding protein_coding MGP_LPJ_T0065846.1 MGP_LPJ_G0028281.1 mouse_genomes_project 4 62755597 62790148 - MGP_LPJ_P0065846 Whrn protein_coding protein_coding MGP_LPJ_T0065847.1 MGP_LPJ_G0028281.1 mouse_genomes_project 4 62756254 62790066 - Whrn protein_coding retained_intron MGP_LPJ_T0065140.1 MGP_LPJ_G0028115.1 mouse_genomes_project 4 41547029 41593607 + MGP_LPJ_P0065140 Rusc2 protein_coding protein_coding MGP_LPJ_T0065141.1 MGP_LPJ_G0028115.1 mouse_genomes_project 4 41547107 41581315 + MGP_LPJ_P0065141 Rusc2 protein_coding protein_coding MGP_LPJ_T0065142.1 MGP_LPJ_G0028115.1 mouse_genomes_project 4 41547120 41582709 + Rusc2 protein_coding processed_transcript MGP_LPJ_T0065143.1 MGP_LPJ_G0028115.1 mouse_genomes_project 4 41548340 41581359 + MGP_LPJ_P0065143 Rusc2 protein_coding protein_coding MGP_LPJ_T0065144.1 MGP_LPJ_G0028115.1 mouse_genomes_project 4 41548401 41581274 + MGP_LPJ_P0065144 Rusc2 protein_coding protein_coding MGP_LPJ_T0065145.1 MGP_LPJ_G0028115.1 mouse_genomes_project 4 41549170 41588438 + Rusc2 protein_coding processed_transcript MGP_LPJ_T0065146.1 MGP_LPJ_G0028115.1 mouse_genomes_project 4 41549223 41581412 + MGP_LPJ_P0065146 Rusc2 protein_coding protein_coding MGP_LPJ_T0065147.1 MGP_LPJ_G0028115.1 mouse_genomes_project 4 41566168 41593592 + Rusc2 protein_coding retained_intron MGP_LPJ_T0065148.1 MGP_LPJ_G0028115.1 mouse_genomes_project 4 41566183 41581258 + MGP_LPJ_P0065148 Rusc2 protein_coding protein_coding MGP_LPJ_T0065149.1 MGP_LPJ_G0028115.1 mouse_genomes_project 4 41571365 41593607 + MGP_LPJ_P0065149 Rusc2 protein_coding protein_coding MGP_LPJ_T0065150.1 MGP_LPJ_G0028115.1 mouse_genomes_project 4 41571432 41588974 + Rusc2 protein_coding processed_transcript MGP_LPJ_T0065151.1 MGP_LPJ_G0028115.1 mouse_genomes_project 4 41571487 41581698 + MGP_LPJ_P0065151 Rusc2 protein_coding protein_coding MGP_LPJ_T0065152.1 MGP_LPJ_G0028115.1 mouse_genomes_project 4 41572259 41588321 + MGP_LPJ_P0065152 Rusc2 protein_coding protein_coding MGP_LPJ_T0065153.1 MGP_LPJ_G0028115.1 mouse_genomes_project 4 41581214 41593168 + MGP_LPJ_P0065153 Rusc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0065154.1 MGP_LPJ_G0028115.1 mouse_genomes_project 4 41581214 41593607 + MGP_LPJ_P0065154 Rusc2 protein_coding protein_coding MGP_LPJ_T0065155.1 MGP_LPJ_G0028115.1 mouse_genomes_project 4 41582956 41592884 + Rusc2 protein_coding processed_transcript MGP_LPJ_T0065156.1 MGP_LPJ_G0028115.1 mouse_genomes_project 4 41589010 41590892 + Rusc2 protein_coding retained_intron MGP_LPJ_T0065157.1 MGP_LPJ_G0028115.1 mouse_genomes_project 4 41590109 41590530 + Rusc2 protein_coding retained_intron MGP_LPJ_T0014361.1 MGP_LPJ_G0012452.1 mouse_genomes_project 4 7108465 7109394 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014387.1 MGP_LPJ_G0012478.1 mouse_genomes_project 4 13328018 13329238 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010619.1 MGP_LPJ_G0008737.1 mouse_genomes_project 4 76688870 76688947 - Gm23159 miRNA miRNA MGP_LPJ_T0065619.1 MGP_LPJ_G0028225.1 mouse_genomes_project 4 55610998 55665972 - MGP_LPJ_P0065619 Ikbkap protein_coding protein_coding MGP_LPJ_T0065620.1 MGP_LPJ_G0028225.1 mouse_genomes_project 4 55612330 55618627 - Ikbkap protein_coding retained_intron MGP_LPJ_T0065621.1 MGP_LPJ_G0028225.1 mouse_genomes_project 4 55612333 55624668 - Ikbkap protein_coding retained_intron MGP_LPJ_T0065622.1 MGP_LPJ_G0028225.1 mouse_genomes_project 4 55616196 55619733 - Ikbkap protein_coding retained_intron MGP_LPJ_T0065623.1 MGP_LPJ_G0028225.1 mouse_genomes_project 4 55629209 55633938 - Ikbkap protein_coding retained_intron MGP_LPJ_T0065624.1 MGP_LPJ_G0028225.1 mouse_genomes_project 4 55637781 55641055 - Ikbkap protein_coding retained_intron MGP_LPJ_T0099485.1 MGP_LPJ_G0037748.1 mouse_genomes_project 4 56676769 56676873 + Gm24277 snRNA snRNA MGP_LPJ_T0004454.1 MGP_LPJ_G0003882.1 mouse_genomes_project 4 22030994 22038669 + Gm11899 antisense antisense MGP_LPJ_T0067002.1 MGP_LPJ_G0028541.1 mouse_genomes_project 4 117706657 117710205 + Ccdc17 protein_coding processed_transcript MGP_LPJ_T0067003.1 MGP_LPJ_G0028541.1 mouse_genomes_project 4 117706733 117710270 + MGP_LPJ_P0067003 Ccdc17 protein_coding protein_coding MGP_LPJ_T0067004.1 MGP_LPJ_G0028541.1 mouse_genomes_project 4 117706806 117708204 + Ccdc17 protein_coding processed_transcript MGP_LPJ_T0067005.1 MGP_LPJ_G0028541.1 mouse_genomes_project 4 117707763 117710226 + Ccdc17 protein_coding processed_transcript MGP_LPJ_T0067006.1 MGP_LPJ_G0028541.1 mouse_genomes_project 4 117708495 117709168 + Ccdc17 protein_coding processed_transcript MGP_LPJ_T0100812.1 MGP_LPJ_G0039075.1 mouse_genomes_project 4 134654614 134654819 - Snora73a snoRNA snoRNA MGP_LPJ_T0067037.1 MGP_LPJ_G0028547.1 mouse_genomes_project 4 117839258 117925328 + MGP_LPJ_P0067037 Tesk2 protein_coding protein_coding MGP_LPJ_T0067038.1 MGP_LPJ_G0028547.1 mouse_genomes_project 4 117839279 117927042 + MGP_LPJ_P0067038 Tesk2 protein_coding protein_coding MGP_LPJ_T0067039.1 MGP_LPJ_G0028547.1 mouse_genomes_project 4 117860861 117925188 + MGP_LPJ_P0067039 Tesk2 protein_coding protein_coding MGP_LPJ_T0067040.1 MGP_LPJ_G0028547.1 mouse_genomes_project 4 117891900 117923349 + Tesk2 protein_coding processed_transcript MGP_LPJ_T0011572.1 MGP_LPJ_G0009690.1 mouse_genomes_project 4 16571768 16572058 - Gm25655 misc_RNA misc_RNA MGP_LPJ_T0099468.1 MGP_LPJ_G0037731.1 mouse_genomes_project 4 23182142 23182248 + Gm24965 snRNA snRNA MGP_LPJ_T0067591.1 MGP_LPJ_G0028685.1 mouse_genomes_project 4 128092062 128104140 - Sh3d21 protein_coding processed_transcript MGP_LPJ_T0067592.1 MGP_LPJ_G0028685.1 mouse_genomes_project 4 128092062 128104101 - MGP_LPJ_P0067592 Sh3d21 protein_coding protein_coding MGP_LPJ_T0067593.1 MGP_LPJ_G0028685.1 mouse_genomes_project 4 128092062 128104966 - MGP_LPJ_P0067593 Sh3d21 protein_coding protein_coding MGP_LPJ_T0067594.1 MGP_LPJ_G0028685.1 mouse_genomes_project 4 128092068 128104076 - Sh3d21 protein_coding processed_transcript MGP_LPJ_T0067595.1 MGP_LPJ_G0028685.1 mouse_genomes_project 4 128093017 128104131 - Sh3d21 protein_coding processed_transcript MGP_LPJ_T0066463.1 MGP_LPJ_G0028435.1 mouse_genomes_project 4 107419945 107449510 - MGP_LPJ_P0066463 Lexm protein_coding protein_coding MGP_LPJ_T0066464.1 MGP_LPJ_G0028435.1 mouse_genomes_project 4 107419945 107449513 - MGP_LPJ_P0066464 Lexm protein_coding nonsense_mediated_decay MGP_LPJ_T0066465.1 MGP_LPJ_G0028435.1 mouse_genomes_project 4 107419945 107438299 - MGP_LPJ_P0066465 Lexm protein_coding nonsense_mediated_decay MGP_LPJ_T0066466.1 MGP_LPJ_G0028435.1 mouse_genomes_project 4 107420346 107449510 - MGP_LPJ_P0066466 Lexm protein_coding protein_coding MGP_LPJ_T0069031.1 MGP_LPJ_G0029022.1 mouse_genomes_project 4 151802261 151808751 - MGP_LPJ_P0069031 Fbxo6 protein_coding protein_coding MGP_LPJ_T0069032.1 MGP_LPJ_G0029022.1 mouse_genomes_project 4 151802261 151808503 - MGP_LPJ_P0069032 Fbxo6 protein_coding protein_coding MGP_LPJ_T0069033.1 MGP_LPJ_G0029022.1 mouse_genomes_project 4 151802332 151808508 - MGP_LPJ_P0069033 Fbxo6 protein_coding protein_coding MGP_LPJ_T0069034.1 MGP_LPJ_G0029022.1 mouse_genomes_project 4 151802333 151808675 - MGP_LPJ_P0069034 Fbxo6 protein_coding protein_coding MGP_LPJ_T0069035.1 MGP_LPJ_G0029022.1 mouse_genomes_project 4 151802554 151808756 - MGP_LPJ_P0069035 Fbxo6 protein_coding protein_coding MGP_LPJ_T0069036.1 MGP_LPJ_G0029022.1 mouse_genomes_project 4 151802637 151806279 - MGP_LPJ_P0069036 Fbxo6 protein_coding protein_coding MGP_LPJ_T0069037.1 MGP_LPJ_G0029022.1 mouse_genomes_project 4 151802663 151808520 - MGP_LPJ_P0069037 Fbxo6 protein_coding protein_coding MGP_LPJ_T0069038.1 MGP_LPJ_G0029022.1 mouse_genomes_project 4 151806003 151808241 - MGP_LPJ_P0069038 Fbxo6 protein_coding protein_coding MGP_LPJ_T0069502.1 MGP_LPJ_G0029108.1 mouse_genomes_project 4 159192031 159222154 - MGP_LPJ_P0069502 Plch2 protein_coding protein_coding MGP_LPJ_T0069503.1 MGP_LPJ_G0029108.1 mouse_genomes_project 4 159192042 159205102 - Plch2 protein_coding retained_intron MGP_LPJ_T0069504.1 MGP_LPJ_G0029108.1 mouse_genomes_project 4 159192283 159230630 - MGP_LPJ_P0069504 Plch2 protein_coding protein_coding MGP_LPJ_T0069505.1 MGP_LPJ_G0029108.1 mouse_genomes_project 4 159192283 159218177 - MGP_LPJ_P0069505 Plch2 protein_coding protein_coding MGP_LPJ_T0069506.1 MGP_LPJ_G0029108.1 mouse_genomes_project 4 159192283 159198734 - MGP_LPJ_P0069506 Plch2 protein_coding protein_coding MGP_LPJ_T0069507.1 MGP_LPJ_G0029108.1 mouse_genomes_project 4 159192289 159201560 - Plch2 protein_coding retained_intron MGP_LPJ_T0069508.1 MGP_LPJ_G0029108.1 mouse_genomes_project 4 159192293 159222154 - MGP_LPJ_P0069508 Plch2 protein_coding protein_coding MGP_LPJ_T0069509.1 MGP_LPJ_G0029108.1 mouse_genomes_project 4 159192578 159256552 - MGP_LPJ_P0069509 Plch2 protein_coding protein_coding MGP_LPJ_T0069510.1 MGP_LPJ_G0029108.1 mouse_genomes_project 4 159194615 159268157 - MGP_LPJ_P0069510 Plch2 protein_coding protein_coding MGP_LPJ_T0069511.1 MGP_LPJ_G0029108.1 mouse_genomes_project 4 159207081 159222154 - MGP_LPJ_P0069511 Plch2 protein_coding protein_coding MGP_LPJ_T0069512.1 MGP_LPJ_G0029108.1 mouse_genomes_project 4 159218240 159271599 - MGP_LPJ_P0069512 Plch2 protein_coding protein_coding MGP_LPJ_T0069513.1 MGP_LPJ_G0029108.1 mouse_genomes_project 4 159220246 159230626 - MGP_LPJ_P0069513 Plch2 protein_coding protein_coding MGP_LPJ_T0014492.1 MGP_LPJ_G0012583.1 mouse_genomes_project 4 47250236 47250572 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014541.1 MGP_LPJ_G0012632.1 mouse_genomes_project 4 66563964 66564333 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014619.1 MGP_LPJ_G0012710.1 mouse_genomes_project 4 96481133 96481412 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014625.1 MGP_LPJ_G0012716.1 mouse_genomes_project 4 99137071 99139787 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007907.1 MGP_LPJ_G0006465.1 mouse_genomes_project 4 92227374 92228473 - 4930577H14Rik lincRNA lincRNA MGP_LPJ_T0069333.1 MGP_LPJ_G0029078.1 mouse_genomes_project 4 156197283 156303724 + MGP_LPJ_P0069333 Acot7 protein_coding protein_coding MGP_LPJ_T0069334.1 MGP_LPJ_G0029078.1 mouse_genomes_project 4 156204914 156242276 + Acot7 protein_coding processed_transcript MGP_LPJ_T0069335.1 MGP_LPJ_G0029078.1 mouse_genomes_project 4 156205283 156303727 + MGP_LPJ_P0069335 Acot7 protein_coding protein_coding MGP_LPJ_T0069336.1 MGP_LPJ_G0029078.1 mouse_genomes_project 4 156205355 156303719 + MGP_LPJ_P0069336 Acot7 protein_coding protein_coding MGP_LPJ_T0069337.1 MGP_LPJ_G0029078.1 mouse_genomes_project 4 156221679 156303719 + MGP_LPJ_P0069337 Acot7 protein_coding protein_coding MGP_LPJ_T0069338.1 MGP_LPJ_G0029078.1 mouse_genomes_project 4 156221737 156242356 + Acot7 protein_coding processed_transcript MGP_LPJ_T0068061.1 MGP_LPJ_G0028778.1 mouse_genomes_project 4 134568503 134592444 + MGP_LPJ_P0068061 Taf12 protein_coding protein_coding MGP_LPJ_T0068062.1 MGP_LPJ_G0028778.1 mouse_genomes_project 4 134568541 134570917 + Taf12 protein_coding processed_transcript MGP_LPJ_T0068063.1 MGP_LPJ_G0028778.1 mouse_genomes_project 4 134568544 134589498 + MGP_LPJ_P0068063 Taf12 protein_coding protein_coding MGP_LPJ_T0014676.1 MGP_LPJ_G0012767.1 mouse_genomes_project 4 116784789 116785850 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014689.1 MGP_LPJ_G0012780.1 mouse_genomes_project 4 119013407 119013883 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065756.1 MGP_LPJ_G0028261.1 mouse_genomes_project 4 61565936 61597460 - Fkbp15 protein_coding processed_transcript MGP_LPJ_T0065757.1 MGP_LPJ_G0028261.1 mouse_genomes_project 4 61565936 61625603 - MGP_LPJ_P0065757 Fkbp15 protein_coding protein_coding MGP_LPJ_T0065758.1 MGP_LPJ_G0028261.1 mouse_genomes_project 4 61576199 61625681 - MGP_LPJ_P0065758 Fkbp15 protein_coding protein_coding MGP_LPJ_T0065759.1 MGP_LPJ_G0028261.1 mouse_genomes_project 4 61583553 61625627 - MGP_LPJ_P0065759 Fkbp15 protein_coding protein_coding MGP_LPJ_T0065760.1 MGP_LPJ_G0028261.1 mouse_genomes_project 4 61585569 61625667 - MGP_LPJ_P0065760 Fkbp15 protein_coding protein_coding MGP_LPJ_T0065761.1 MGP_LPJ_G0028261.1 mouse_genomes_project 4 61609300 61625602 - Fkbp15 protein_coding processed_transcript MGP_LPJ_T0011583.1 MGP_LPJ_G0009701.1 mouse_genomes_project 4 53465094 53465382 + Gm24628 misc_RNA misc_RNA MGP_LPJ_T0067829.1 MGP_LPJ_G0028739.1 mouse_genomes_project 4 131717665 131750815 - MGP_LPJ_P0067829 protein_coding protein_coding MGP_LPJ_T0067830.1 MGP_LPJ_G0028739.1 mouse_genomes_project 4 131717843 131719379 - protein_coding retained_intron MGP_LPJ_T0067831.1 MGP_LPJ_G0028739.1 mouse_genomes_project 4 131718471 131741748 - MGP_LPJ_P0067831 protein_coding unknown_likely_coding MGP_LPJ_T0067832.1 MGP_LPJ_G0028739.1 mouse_genomes_project 4 131719943 131726480 - protein_coding retained_intron MGP_LPJ_T0067833.1 MGP_LPJ_G0028739.1 mouse_genomes_project 4 131726180 131736633 - protein_coding retained_intron MGP_LPJ_T0067834.1 MGP_LPJ_G0028739.1 mouse_genomes_project 4 131726327 131728270 - protein_coding retained_intron MGP_LPJ_T0067835.1 MGP_LPJ_G0028739.1 mouse_genomes_project 4 131726515 131728228 - protein_coding retained_intron MGP_LPJ_T0067836.1 MGP_LPJ_G0028739.1 mouse_genomes_project 4 131736222 131750793 - protein_coding retained_intron MGP_LPJ_T0065018.1 MGP_LPJ_G0028095.1 mouse_genomes_project 4 39812864 39816332 + MGP_LPJ_P0065018 Galt protein_coding protein_coding MGP_LPJ_T0065019.1 MGP_LPJ_G0028095.1 mouse_genomes_project 4 39812864 39816332 + MGP_LPJ_P0065019 Galt protein_coding protein_coding MGP_LPJ_T0065020.1 MGP_LPJ_G0028095.1 mouse_genomes_project 4 39812889 39815186 + Galt protein_coding processed_transcript MGP_LPJ_T0065021.1 MGP_LPJ_G0028095.1 mouse_genomes_project 4 39812889 39814084 + Galt protein_coding processed_transcript MGP_LPJ_T0065022.1 MGP_LPJ_G0028095.1 mouse_genomes_project 4 39813394 39815117 + Galt protein_coding processed_transcript MGP_LPJ_T0065023.1 MGP_LPJ_G0028095.1 mouse_genomes_project 4 39813476 39814909 + Galt protein_coding processed_transcript MGP_LPJ_T0065024.1 MGP_LPJ_G0028095.1 mouse_genomes_project 4 39813597 39815117 + Galt protein_coding processed_transcript MGP_LPJ_T0065025.1 MGP_LPJ_G0028095.1 mouse_genomes_project 4 39813846 39816332 + Galt protein_coding processed_transcript MGP_LPJ_T0065026.1 MGP_LPJ_G0028095.1 mouse_genomes_project 4 39813890 39815875 + Galt protein_coding processed_transcript MGP_LPJ_T0065027.1 MGP_LPJ_G0028095.1 mouse_genomes_project 4 39813898 39815415 + Galt protein_coding processed_transcript MGP_LPJ_T0065987.1 MGP_LPJ_G0028317.1 mouse_genomes_project 4 83388496 83427762 + MGP_LPJ_P0065987 Snapc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0065988.1 MGP_LPJ_G0028317.1 mouse_genomes_project 4 83388496 83418428 + MGP_LPJ_P0065988 Snapc3 protein_coding protein_coding MGP_LPJ_T0065989.1 MGP_LPJ_G0028317.1 mouse_genomes_project 4 83388503 83413619 + MGP_LPJ_P0065989 Snapc3 protein_coding protein_coding MGP_LPJ_T0065990.1 MGP_LPJ_G0028317.1 mouse_genomes_project 4 83388516 83419117 + MGP_LPJ_P0065990 Snapc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0065991.1 MGP_LPJ_G0028317.1 mouse_genomes_project 4 83388516 83433521 + MGP_LPJ_P0065991 Snapc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0065992.1 MGP_LPJ_G0028317.1 mouse_genomes_project 4 83388521 83433979 + MGP_LPJ_P0065992 Snapc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0065993.1 MGP_LPJ_G0028317.1 mouse_genomes_project 4 83418889 83433468 + Snapc3 protein_coding processed_transcript MGP_LPJ_T0065994.1 MGP_LPJ_G0028317.1 mouse_genomes_project 4 83419037 83432430 + Snapc3 protein_coding processed_transcript MGP_LPJ_T0066001.1 MGP_LPJ_G0028317.1 mouse_genomes_project 4 83429893 83433513 + Snapc3 protein_coding retained_intron MGP_LPJ_T0068493.1 MGP_LPJ_G0028871.1 mouse_genomes_project 4 138789716 138813487 + MGP_LPJ_P0068493 E2f2 protein_coding protein_coding MGP_LPJ_T0068494.1 MGP_LPJ_G0028871.1 mouse_genomes_project 4 138798102 138804232 + E2f2 protein_coding processed_transcript MGP_LPJ_T0008046.1 MGP_LPJ_G0006569.1 mouse_genomes_project 4 158053293 158054574 + Gm13115 lincRNA lincRNA MGP_LPJ_T0099504.1 MGP_LPJ_G0037767.1 mouse_genomes_project 4 101865855 101866019 + Gm25124 snRNA snRNA MGP_LPJ_T0101343.1 MGP_LPJ_G0039549.1 mouse_genomes_project 4 86959620 86973258 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0065401.1 MGP_LPJ_G0028162.1 mouse_genomes_project 4 44125862 44144846 - MGP_LPJ_P0065401 Igfbpl1 protein_coding protein_coding MGP_LPJ_T0065402.1 MGP_LPJ_G0028162.1 mouse_genomes_project 4 44129391 44132748 - Igfbpl1 protein_coding processed_transcript MGP_LPJ_T0066110.1 MGP_LPJ_G0028339.1 mouse_genomes_project 4 88832368 88833165 - MGP_LPJ_P0066110 Ifna12 protein_coding protein_coding MGP_LPJ_T0067254.1 MGP_LPJ_G0028589.1 mouse_genomes_project 4 119947320 119948295 - MGP_LPJ_P0067254 Olfr1342 protein_coding protein_coding MGP_LPJ_T0014412.1 MGP_LPJ_G0012503.1 mouse_genomes_project 4 20789859 20790276 - processed_pseudogene processed_pseudogene MGP_LPJ_T0067329.1 MGP_LPJ_G0028610.1 mouse_genomes_project 4 120731892 120735722 - Ppcs protein_coding retained_intron MGP_LPJ_T0067330.1 MGP_LPJ_G0028610.1 mouse_genomes_project 4 120731892 120735784 - MGP_LPJ_P0067330 Ppcs protein_coding protein_coding MGP_LPJ_T0067331.1 MGP_LPJ_G0028610.1 mouse_genomes_project 4 120731892 120735740 - MGP_LPJ_P0067331 Ppcs protein_coding protein_coding MGP_LPJ_T0100744.1 MGP_LPJ_G0039007.1 mouse_genomes_project 4 35086483 35086608 + Gm22732 snoRNA snoRNA MGP_LPJ_T0067259.1 MGP_LPJ_G0028594.1 mouse_genomes_project 4 120121923 120127513 + MGP_LPJ_P0067259 protein_coding protein_coding MGP_LPJ_T0067737.1 MGP_LPJ_G0028718.1 mouse_genomes_project 4 130898334 130911520 + MGP_LPJ_P0067737 A3galt2 protein_coding protein_coding MGP_LPJ_T0067738.1 MGP_LPJ_G0028718.1 mouse_genomes_project 4 130902228 130912230 + MGP_LPJ_P0067738 A3galt2 protein_coding protein_coding MGP_LPJ_T0014478.1 MGP_LPJ_G0012569.1 mouse_genomes_project 4 41997608 41998968 - processed_pseudogene processed_pseudogene MGP_LPJ_T0069148.1 MGP_LPJ_G0029044.1 mouse_genomes_project 4 153253416 153256445 + MGP_LPJ_P0069148 Lzic protein_coding protein_coding MGP_LPJ_T0069149.1 MGP_LPJ_G0029044.1 mouse_genomes_project 4 153253418 153256473 + MGP_LPJ_P0069149 Lzic protein_coding protein_coding MGP_LPJ_T0069150.1 MGP_LPJ_G0029044.1 mouse_genomes_project 4 153253427 153253929 + Lzic protein_coding processed_transcript MGP_LPJ_T0069151.1 MGP_LPJ_G0029044.1 mouse_genomes_project 4 153253481 153265744 + MGP_LPJ_P0069151 Lzic protein_coding protein_coding MGP_LPJ_T0069152.1 MGP_LPJ_G0029044.1 mouse_genomes_project 4 153253520 153254191 + Lzic protein_coding processed_transcript MGP_LPJ_T0014674.1 MGP_LPJ_G0012765.1 mouse_genomes_project 4 116480793 116481270 + processed_pseudogene processed_pseudogene MGP_LPJ_T0067341.1 MGP_LPJ_G0028614.1 mouse_genomes_project 4 120862927 120904358 + MGP_LPJ_P0067341 Foxj3 protein_coding protein_coding MGP_LPJ_T0067342.1 MGP_LPJ_G0028614.1 mouse_genomes_project 4 120865584 120964472 + MGP_LPJ_P0067342 Foxj3 protein_coding protein_coding MGP_LPJ_T0067343.1 MGP_LPJ_G0028614.1 mouse_genomes_project 4 120865608 120920789 + MGP_LPJ_P0067343 Foxj3 protein_coding protein_coding MGP_LPJ_T0067344.1 MGP_LPJ_G0028614.1 mouse_genomes_project 4 120865611 120964472 + MGP_LPJ_P0067344 Foxj3 protein_coding protein_coding MGP_LPJ_T0067345.1 MGP_LPJ_G0028614.1 mouse_genomes_project 4 120865615 120933862 + Foxj3 protein_coding retained_intron MGP_LPJ_T0067346.1 MGP_LPJ_G0028614.1 mouse_genomes_project 4 120865621 120920798 + MGP_LPJ_P0067346 Foxj3 protein_coding protein_coding MGP_LPJ_T0067347.1 MGP_LPJ_G0028614.1 mouse_genomes_project 4 120865630 120890557 + Foxj3 protein_coding retained_intron MGP_LPJ_T0067348.1 MGP_LPJ_G0028614.1 mouse_genomes_project 4 120865702 120904385 + MGP_LPJ_P0067348 Foxj3 protein_coding protein_coding MGP_LPJ_T0067349.1 MGP_LPJ_G0028614.1 mouse_genomes_project 4 120866447 120904486 + MGP_LPJ_P0067349 Foxj3 protein_coding protein_coding MGP_LPJ_T0067350.1 MGP_LPJ_G0028614.1 mouse_genomes_project 4 120952206 120956626 + Foxj3 protein_coding processed_transcript MGP_LPJ_T0066546.1 MGP_LPJ_G0028448.1 mouse_genomes_project 4 108082591 108091472 + MGP_LPJ_P0066546 Ldlrad1 protein_coding protein_coding MGP_LPJ_T0066724.1 MGP_LPJ_G0028481.1 mouse_genomes_project 4 110069714 110130397 - MGP_LPJ_P0066724 Osbpl9 protein_coding protein_coding MGP_LPJ_T0066725.1 MGP_LPJ_G0028481.1 mouse_genomes_project 4 110070184 110217321 - MGP_LPJ_P0066725 Osbpl9 protein_coding protein_coding MGP_LPJ_T0066726.1 MGP_LPJ_G0028481.1 mouse_genomes_project 4 110070219 110130411 - MGP_LPJ_P0066726 Osbpl9 protein_coding protein_coding MGP_LPJ_T0066727.1 MGP_LPJ_G0028481.1 mouse_genomes_project 4 110070224 110217304 - MGP_LPJ_P0066727 Osbpl9 protein_coding protein_coding MGP_LPJ_T0066728.1 MGP_LPJ_G0028481.1 mouse_genomes_project 4 110070224 110217359 - MGP_LPJ_P0066728 Osbpl9 protein_coding protein_coding MGP_LPJ_T0066729.1 MGP_LPJ_G0028481.1 mouse_genomes_project 4 110070224 110217321 - MGP_LPJ_P0066729 Osbpl9 protein_coding nonsense_mediated_decay MGP_LPJ_T0066730.1 MGP_LPJ_G0028481.1 mouse_genomes_project 4 110070543 110098439 - Osbpl9 protein_coding processed_transcript MGP_LPJ_T0066731.1 MGP_LPJ_G0028481.1 mouse_genomes_project 4 110070648 110217359 - MGP_LPJ_P0066731 Osbpl9 protein_coding protein_coding MGP_LPJ_T0066732.1 MGP_LPJ_G0028481.1 mouse_genomes_project 4 110070656 110170436 - MGP_LPJ_P0066732 Osbpl9 protein_coding protein_coding MGP_LPJ_T0066733.1 MGP_LPJ_G0028481.1 mouse_genomes_project 4 110070827 110130296 - MGP_LPJ_P0066733 Osbpl9 protein_coding unknown_likely_coding MGP_LPJ_T0066734.1 MGP_LPJ_G0028481.1 mouse_genomes_project 4 110074397 110075950 - Osbpl9 protein_coding processed_transcript MGP_LPJ_T0066735.1 MGP_LPJ_G0028481.1 mouse_genomes_project 4 110077968 110082045 - Osbpl9 protein_coding processed_transcript MGP_LPJ_T0066736.1 MGP_LPJ_G0028481.1 mouse_genomes_project 4 110078322 110130073 - Osbpl9 protein_coding processed_transcript MGP_LPJ_T0066737.1 MGP_LPJ_G0028481.1 mouse_genomes_project 4 110094078 110122174 - Osbpl9 protein_coding processed_transcript MGP_LPJ_T0066738.1 MGP_LPJ_G0028481.1 mouse_genomes_project 4 110094202 110170622 - Osbpl9 protein_coding retained_intron MGP_LPJ_T0066739.1 MGP_LPJ_G0028481.1 mouse_genomes_project 4 110097391 110099769 - Osbpl9 protein_coding retained_intron MGP_LPJ_T0066740.1 MGP_LPJ_G0028481.1 mouse_genomes_project 4 110098399 110120441 - Osbpl9 protein_coding processed_transcript MGP_LPJ_T0066741.1 MGP_LPJ_G0028481.1 mouse_genomes_project 4 110098436 110170951 - Osbpl9 protein_coding processed_transcript MGP_LPJ_T0066742.1 MGP_LPJ_G0028481.1 mouse_genomes_project 4 110145847 110217323 - Osbpl9 protein_coding processed_transcript MGP_LPJ_T0066743.1 MGP_LPJ_G0028481.1 mouse_genomes_project 4 110186419 110217321 - Osbpl9 protein_coding retained_intron MGP_LPJ_T0014397.1 MGP_LPJ_G0012488.1 mouse_genomes_project 4 16009188 16010126 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099520.1 MGP_LPJ_G0037783.1 mouse_genomes_project 4 122510496 122510660 - Gm23540 snRNA snRNA MGP_LPJ_T0068944.1 MGP_LPJ_G0028990.1 mouse_genomes_project 4 147519121 147524223 - MGP_LPJ_P0068944 Oog3 protein_coding protein_coding MGP_LPJ_T0065109.1 MGP_LPJ_G0028112.1 mouse_genomes_project 4 41181927 41196055 - MGP_LPJ_P0065109 Fam214b protein_coding protein_coding MGP_LPJ_T0065110.1 MGP_LPJ_G0028112.1 mouse_genomes_project 4 41181927 41196450 - MGP_LPJ_P0065110 Fam214b protein_coding protein_coding MGP_LPJ_T0065111.1 MGP_LPJ_G0028112.1 mouse_genomes_project 4 41181927 41189786 - MGP_LPJ_P0065111 Fam214b protein_coding protein_coding MGP_LPJ_T0065112.1 MGP_LPJ_G0028112.1 mouse_genomes_project 4 41181927 41196027 - MGP_LPJ_P0065112 Fam214b protein_coding protein_coding MGP_LPJ_T0065113.1 MGP_LPJ_G0028112.1 mouse_genomes_project 4 41181927 41189789 - MGP_LPJ_P0065113 Fam214b protein_coding protein_coding MGP_LPJ_T0065114.1 MGP_LPJ_G0028112.1 mouse_genomes_project 4 41181927 41196450 - MGP_LPJ_P0065114 Fam214b protein_coding nonsense_mediated_decay MGP_LPJ_T0065115.1 MGP_LPJ_G0028112.1 mouse_genomes_project 4 41185832 41189793 - MGP_LPJ_P0065115 Fam214b protein_coding protein_coding MGP_LPJ_T0065116.1 MGP_LPJ_G0028112.1 mouse_genomes_project 4 41186113 41186815 - MGP_LPJ_P0065116 Fam214b protein_coding protein_coding MGP_LPJ_T0065117.1 MGP_LPJ_G0028112.1 mouse_genomes_project 4 41186216 41188829 - MGP_LPJ_P0065117 Fam214b protein_coding protein_coding MGP_LPJ_T0065118.1 MGP_LPJ_G0028112.1 mouse_genomes_project 4 41186490 41195989 - Fam214b protein_coding processed_transcript MGP_LPJ_T0068553.1 MGP_LPJ_G0028890.1 mouse_genomes_project 4 140101048 140140174 - MGP_LPJ_P0068553 protein_coding protein_coding MGP_LPJ_T0007830.1 MGP_LPJ_G0006399.1 mouse_genomes_project 4 19646733 19650551 + Gm30731 lincRNA lincRNA MGP_LPJ_T0068829.1 MGP_LPJ_G0028953.1 mouse_genomes_project 4 144366969 144396454 + MGP_LPJ_P0068829 Epha2 protein_coding protein_coding MGP_LPJ_T0068830.1 MGP_LPJ_G0028953.1 mouse_genomes_project 4 144368136 144374498 + Epha2 protein_coding processed_transcript MGP_LPJ_T0068831.1 MGP_LPJ_G0028953.1 mouse_genomes_project 4 144374657 144376744 + Epha2 protein_coding processed_transcript MGP_LPJ_T0068832.1 MGP_LPJ_G0028953.1 mouse_genomes_project 4 144382669 144386598 + Epha2 protein_coding processed_transcript MGP_LPJ_T0004573.1 MGP_LPJ_G0003973.1 mouse_genomes_project 4 136270087 136274784 + Gm12977 antisense antisense MGP_LPJ_T0004574.1 MGP_LPJ_G0003973.1 mouse_genomes_project 4 136270728 136274010 + Gm12977 antisense antisense MGP_LPJ_T0068957.1 MGP_LPJ_G0029002.1 mouse_genomes_project 4 148132805 148150280 - MGP_LPJ_P0068957 Gm13178 protein_coding protein_coding MGP_LPJ_T0069008.1 MGP_LPJ_G0029017.1 mouse_genomes_project 4 151637679 151675985 - MGP_LPJ_P0069008 Clcn6 protein_coding protein_coding MGP_LPJ_T0069009.1 MGP_LPJ_G0029017.1 mouse_genomes_project 4 151639570 151675977 - MGP_LPJ_P0069009 Clcn6 protein_coding protein_coding MGP_LPJ_T0069010.1 MGP_LPJ_G0029017.1 mouse_genomes_project 4 151640025 151675934 - MGP_LPJ_P0069010 Clcn6 protein_coding nonsense_mediated_decay MGP_LPJ_T0069011.1 MGP_LPJ_G0029017.1 mouse_genomes_project 4 151657839 151675927 - Clcn6 protein_coding processed_transcript MGP_LPJ_T0069012.1 MGP_LPJ_G0029017.1 mouse_genomes_project 4 151659807 151675726 - MGP_LPJ_P0069012 Clcn6 protein_coding nonsense_mediated_decay MGP_LPJ_T0066362.1 MGP_LPJ_G0028409.1 mouse_genomes_project 4 102458472 102465247 - MGP_LPJ_P0066362 protein_coding protein_coding MGP_LPJ_T0068197.1 MGP_LPJ_G0028808.1 mouse_genomes_project 4 135894820 135904679 + MGP_LPJ_P0068197 Kdf1 protein_coding protein_coding MGP_LPJ_T0068198.1 MGP_LPJ_G0028808.1 mouse_genomes_project 4 135894849 135906886 + MGP_LPJ_P0068198 Kdf1 protein_coding protein_coding MGP_LPJ_T0068199.1 MGP_LPJ_G0028808.1 mouse_genomes_project 4 135894880 135904402 + MGP_LPJ_P0068199 Kdf1 protein_coding protein_coding MGP_LPJ_T0068200.1 MGP_LPJ_G0028808.1 mouse_genomes_project 4 135894912 135906881 + MGP_LPJ_P0068200 Kdf1 protein_coding protein_coding MGP_LPJ_T0068201.1 MGP_LPJ_G0028808.1 mouse_genomes_project 4 135894940 135906883 + MGP_LPJ_P0068201 Kdf1 protein_coding protein_coding MGP_LPJ_T0007833.1 MGP_LPJ_G0006402.1 mouse_genomes_project 4 21113493 21113970 - Gm28448 lincRNA lincRNA MGP_LPJ_T0010671.1 MGP_LPJ_G0008789.1 mouse_genomes_project 4 146355372 146355435 - Mir7021 miRNA miRNA MGP_LPJ_T0102132.1 MGP_LPJ_G0040169.1 mouse_genomes_project 4 41981080 41985637 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0064723.1 MGP_LPJ_G0028023.1 mouse_genomes_project 4 21829588 22039238 - MGP_LPJ_P0064723 Klhl32 protein_coding protein_coding MGP_LPJ_T0064724.1 MGP_LPJ_G0028023.1 mouse_genomes_project 4 21829588 22087498 - MGP_LPJ_P0064724 Klhl32 protein_coding protein_coding MGP_LPJ_T0064725.1 MGP_LPJ_G0028023.1 mouse_genomes_project 4 21834785 21963853 - MGP_LPJ_P0064725 Klhl32 protein_coding nonsense_mediated_decay MGP_LPJ_T0064726.1 MGP_LPJ_G0028023.1 mouse_genomes_project 4 21834874 22087305 - MGP_LPJ_P0064726 Klhl32 protein_coding nonsense_mediated_decay MGP_LPJ_T0064727.1 MGP_LPJ_G0028023.1 mouse_genomes_project 4 21836092 22087460 - MGP_LPJ_P0064727 Klhl32 protein_coding protein_coding MGP_LPJ_T0064728.1 MGP_LPJ_G0028023.1 mouse_genomes_project 4 21867713 22087305 - Klhl32 protein_coding retained_intron MGP_LPJ_T0064729.1 MGP_LPJ_G0028023.1 mouse_genomes_project 4 21868255 21895862 - Klhl32 protein_coding processed_transcript MGP_LPJ_T0067041.1 MGP_LPJ_G0028548.1 mouse_genomes_project 4 117915441 117928634 - MGP_LPJ_P0067041 Toe1 protein_coding protein_coding MGP_LPJ_T0067042.1 MGP_LPJ_G0028548.1 mouse_genomes_project 4 117925087 117928726 - MGP_LPJ_P0067042 Toe1 protein_coding protein_coding MGP_LPJ_T0067043.1 MGP_LPJ_G0028548.1 mouse_genomes_project 4 117925097 117926278 - Toe1 protein_coding processed_transcript MGP_LPJ_T0067044.1 MGP_LPJ_G0028548.1 mouse_genomes_project 4 117925759 117926691 - Toe1 protein_coding retained_intron MGP_LPJ_T0067045.1 MGP_LPJ_G0028548.1 mouse_genomes_project 4 117925867 117927609 - MGP_LPJ_P0067045 Toe1 protein_coding nonsense_mediated_decay MGP_LPJ_T0067046.1 MGP_LPJ_G0028548.1 mouse_genomes_project 4 117926361 117927686 - Toe1 protein_coding retained_intron MGP_LPJ_T0067047.1 MGP_LPJ_G0028548.1 mouse_genomes_project 4 117926796 117928692 - Toe1 protein_coding processed_transcript MGP_LPJ_T0067048.1 MGP_LPJ_G0028548.1 mouse_genomes_project 4 117926902 117928634 - Toe1 protein_coding retained_intron MGP_LPJ_T0065858.1 MGP_LPJ_G0028287.1 mouse_genomes_project 4 63156770 63187030 - MGP_LPJ_P0065858 Tnfsf8 protein_coding protein_coding MGP_LPJ_T0065444.1 MGP_LPJ_G0028172.1 mouse_genomes_project 4 44753811 44775516 - MGP_LPJ_P0065444 Hemgn protein_coding protein_coding MGP_LPJ_T0065445.1 MGP_LPJ_G0028172.1 mouse_genomes_project 4 44753811 44764034 - MGP_LPJ_P0065445 Hemgn protein_coding protein_coding MGP_LPJ_T0066490.1 MGP_LPJ_G0028441.1 mouse_genomes_project 4 107587877 107648960 - MGP_LPJ_P0066490 Acot11 protein_coding protein_coding MGP_LPJ_T0066491.1 MGP_LPJ_G0028441.1 mouse_genomes_project 4 107590561 107654112 - MGP_LPJ_P0066491 Acot11 protein_coding protein_coding MGP_LPJ_T0066492.1 MGP_LPJ_G0028441.1 mouse_genomes_project 4 107590717 107615260 - MGP_LPJ_P0066492 Acot11 protein_coding nonsense_mediated_decay MGP_LPJ_T0066493.1 MGP_LPJ_G0028441.1 mouse_genomes_project 4 107597040 107599287 - Acot11 protein_coding processed_transcript MGP_LPJ_T0066494.1 MGP_LPJ_G0028441.1 mouse_genomes_project 4 107605517 107648957 - MGP_LPJ_P0066494 Acot11 protein_coding nonsense_mediated_decay MGP_LPJ_T0066495.1 MGP_LPJ_G0028441.1 mouse_genomes_project 4 107606925 107648904 - MGP_LPJ_P0066495 Acot11 protein_coding protein_coding MGP_LPJ_T0066496.1 MGP_LPJ_G0028441.1 mouse_genomes_project 4 107606968 107649363 - MGP_LPJ_P0066496 Acot11 protein_coding protein_coding MGP_LPJ_T0102148.1 MGP_LPJ_G0040185.1 mouse_genomes_project 4 102513902 102514175 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0007923.1 MGP_LPJ_G0006479.1 mouse_genomes_project 4 101965845 101999508 + 0610043K17Rik lincRNA lincRNA MGP_LPJ_T0007924.1 MGP_LPJ_G0006479.1 mouse_genomes_project 4 101966184 102008824 + 0610043K17Rik lincRNA lincRNA MGP_LPJ_T0011574.1 MGP_LPJ_G0009692.1 mouse_genomes_project 4 32114972 32115078 + Gm23466 misc_RNA misc_RNA MGP_LPJ_T0068392.1 MGP_LPJ_G0028851.1 mouse_genomes_project 4 137856246 137891482 - MGP_LPJ_P0068392 Srrm1 protein_coding protein_coding MGP_LPJ_T0068393.1 MGP_LPJ_G0028851.1 mouse_genomes_project 4 137856253 137891405 - MGP_LPJ_P0068393 Srrm1 protein_coding protein_coding MGP_LPJ_T0068394.1 MGP_LPJ_G0028851.1 mouse_genomes_project 4 137856856 137891405 - MGP_LPJ_P0068394 Srrm1 protein_coding protein_coding MGP_LPJ_T0068395.1 MGP_LPJ_G0028851.1 mouse_genomes_project 4 137857795 137891297 - MGP_LPJ_P0068395 Srrm1 protein_coding protein_coding MGP_LPJ_T0068396.1 MGP_LPJ_G0028851.1 mouse_genomes_project 4 137858052 137862960 - MGP_LPJ_P0068396 Srrm1 protein_coding protein_coding MGP_LPJ_T0068397.1 MGP_LPJ_G0028851.1 mouse_genomes_project 4 137858238 137891295 - Srrm1 protein_coding retained_intron MGP_LPJ_T0068398.1 MGP_LPJ_G0028851.1 mouse_genomes_project 4 137859528 137860610 - Srrm1 protein_coding retained_intron MGP_LPJ_T0068399.1 MGP_LPJ_G0028851.1 mouse_genomes_project 4 137864906 137867985 - Srrm1 protein_coding retained_intron MGP_LPJ_T0068400.1 MGP_LPJ_G0028851.1 mouse_genomes_project 4 137867215 137876269 - Srrm1 protein_coding retained_intron MGP_LPJ_T0068401.1 MGP_LPJ_G0028851.1 mouse_genomes_project 4 137867909 137880657 - MGP_LPJ_P0068401 Srrm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0068402.1 MGP_LPJ_G0028851.1 mouse_genomes_project 4 137876464 137880713 - Srrm1 protein_coding retained_intron MGP_LPJ_T0068403.1 MGP_LPJ_G0028851.1 mouse_genomes_project 4 137880605 137891303 - MGP_LPJ_P0068403 Srrm1 protein_coding protein_coding MGP_LPJ_T0068404.1 MGP_LPJ_G0028851.1 mouse_genomes_project 4 137881828 137891312 - Srrm1 protein_coding retained_intron MGP_LPJ_T0068405.1 MGP_LPJ_G0028851.1 mouse_genomes_project 4 137882719 137885387 - MGP_LPJ_P0068405 Srrm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0068406.1 MGP_LPJ_G0028851.1 mouse_genomes_project 4 137883874 137891363 - Srrm1 protein_coding processed_transcript MGP_LPJ_T0099515.1 MGP_LPJ_G0037778.1 mouse_genomes_project 4 118337582 118337698 + Gm25099 snRNA snRNA MGP_LPJ_T0100781.1 MGP_LPJ_G0039044.1 mouse_genomes_project 4 93893451 93893580 - Gm23443 snoRNA snoRNA MGP_LPJ_T0014664.1 MGP_LPJ_G0012755.1 mouse_genomes_project 4 110805319 110805723 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014636.1 MGP_LPJ_G0012727.1 mouse_genomes_project 4 101937677 101937969 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099479.1 MGP_LPJ_G0037742.1 mouse_genomes_project 4 39355298 39355402 - Gm26084 snRNA snRNA MGP_LPJ_T0007819.1 MGP_LPJ_G0006389.1 mouse_genomes_project 4 8059823 8080957 + Gm26663 lincRNA lincRNA MGP_LPJ_T0066884.1 MGP_LPJ_G0028517.1 mouse_genomes_project 4 116609732 116624888 + MGP_LPJ_P0066884 protein_coding protein_coding MGP_LPJ_T0066885.1 MGP_LPJ_G0028517.1 mouse_genomes_project 4 116609732 116612986 + MGP_LPJ_P0066885 protein_coding protein_coding MGP_LPJ_T0066887.1 MGP_LPJ_G0028517.1 mouse_genomes_project 4 116609767 116618320 + MGP_LPJ_P0066887 protein_coding protein_coding MGP_LPJ_T0066888.1 MGP_LPJ_G0028517.1 mouse_genomes_project 4 116609781 116624886 + MGP_LPJ_P0066888 protein_coding protein_coding MGP_LPJ_T0004516.1 MGP_LPJ_G0003929.1 mouse_genomes_project 4 107414001 107418145 - antisense antisense MGP_LPJ_T0102134.1 MGP_LPJ_G0040171.1 mouse_genomes_project 4 51651566 51652518 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0099498.1 MGP_LPJ_G0037761.1 mouse_genomes_project 4 97358250 97358313 + Gm27579 snRNA snRNA MGP_LPJ_T0064866.1 MGP_LPJ_G0028057.1 mouse_genomes_project 4 32658589 32884208 - MGP_LPJ_P0064866 Mob3b protein_coding protein_coding MGP_LPJ_T0064867.1 MGP_LPJ_G0028057.1 mouse_genomes_project 4 32803441 32884208 - Mob3b protein_coding processed_transcript MGP_LPJ_T0014679.1 MGP_LPJ_G0012770.1 mouse_genomes_project 4 117999850 118000728 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007822.1 MGP_LPJ_G0006392.1 mouse_genomes_project 4 9112073 9167750 + Gm11846 lincRNA lincRNA MGP_LPJ_T0065357.1 MGP_LPJ_G0028152.1 mouse_genomes_project 4 43284595 43299735 + MGP_LPJ_P0065357 Polr1e protein_coding protein_coding MGP_LPJ_T0065358.1 MGP_LPJ_G0028152.1 mouse_genomes_project 4 43284674 43298408 + MGP_LPJ_P0065358 Polr1e protein_coding protein_coding MGP_LPJ_T0065359.1 MGP_LPJ_G0028152.1 mouse_genomes_project 4 43284675 43302608 + MGP_LPJ_P0065359 Polr1e protein_coding protein_coding MGP_LPJ_T0065360.1 MGP_LPJ_G0028152.1 mouse_genomes_project 4 43284709 43292883 + Polr1e protein_coding processed_transcript MGP_LPJ_T0065361.1 MGP_LPJ_G0028152.1 mouse_genomes_project 4 43285247 43298155 + MGP_LPJ_P0065361 Polr1e protein_coding protein_coding MGP_LPJ_T0065362.1 MGP_LPJ_G0028152.1 mouse_genomes_project 4 43295156 43297428 + Polr1e protein_coding processed_transcript MGP_LPJ_T0065363.1 MGP_LPJ_G0028152.1 mouse_genomes_project 4 43297274 43298403 + Polr1e protein_coding processed_transcript MGP_LPJ_T0069445.1 MGP_LPJ_G0029097.1 mouse_genomes_project 4 158333420 158444759 + MGP_LPJ_P0069445 Megf6 protein_coding protein_coding MGP_LPJ_T0069446.1 MGP_LPJ_G0029097.1 mouse_genomes_project 4 158401000 158440785 + MGP_LPJ_P0069446 Megf6 protein_coding protein_coding MGP_LPJ_T0069447.1 MGP_LPJ_G0029097.1 mouse_genomes_project 4 158412868 158417780 + Megf6 protein_coding retained_intron MGP_LPJ_T0069448.1 MGP_LPJ_G0029097.1 mouse_genomes_project 4 158433676 158444230 + Megf6 protein_coding processed_transcript MGP_LPJ_T0069449.1 MGP_LPJ_G0029097.1 mouse_genomes_project 4 158435232 158439592 + MGP_LPJ_P0069449 Megf6 protein_coding protein_coding MGP_LPJ_T0069450.1 MGP_LPJ_G0029097.1 mouse_genomes_project 4 158438847 158443174 + Megf6 protein_coding retained_intron MGP_LPJ_T0069451.1 MGP_LPJ_G0029097.1 mouse_genomes_project 4 158438942 158440090 + Megf6 protein_coding retained_intron MGP_LPJ_T0008045.1 MGP_LPJ_G0006568.1 mouse_genomes_project 4 157332779 157333199 + Gm13174 lincRNA lincRNA MGP_LPJ_T0068543.1 MGP_LPJ_G0028884.1 mouse_genomes_project 4 139569282 139572544 - MGP_LPJ_P0068543 C1qc protein_coding protein_coding MGP_LPJ_T0068544.1 MGP_LPJ_G0028884.1 mouse_genomes_project 4 139571129 139572355 - C1qc protein_coding processed_transcript MGP_LPJ_T0014784.1 MGP_LPJ_G0012875.1 mouse_genomes_project 4 156176328 156176812 - processed_pseudogene processed_pseudogene MGP_LPJ_T0068535.1 MGP_LPJ_G0028881.1 mouse_genomes_project 4 139283717 139299986 + MGP_LPJ_P0068535 Lactbl1 protein_coding protein_coding MGP_LPJ_T0068709.1 MGP_LPJ_G0028925.1 mouse_genomes_project 4 142211082 142218762 + MGP_LPJ_P0068709 Akr7a5 protein_coding protein_coding MGP_LPJ_T0068710.1 MGP_LPJ_G0028925.1 mouse_genomes_project 4 142216917 142217746 + Akr7a5 protein_coding processed_transcript MGP_LPJ_T0004489.1 MGP_LPJ_G0003912.1 mouse_genomes_project 4 73882917 73884310 - A230083N12Rik antisense antisense MGP_LPJ_T0068550.1 MGP_LPJ_G0028888.1 mouse_genomes_project 4 139977343 140000639 + MGP_LPJ_P0068550 Wnt4 protein_coding protein_coding MGP_LPJ_T0008005.1 MGP_LPJ_G0006532.1 mouse_genomes_project 4 134653478 134655222 + Gm17300 lincRNA lincRNA MGP_LPJ_T0064483.1 MGP_LPJ_G0027965.1 mouse_genomes_project 4 5122246 5200693 + MGP_LPJ_P0064483 Rab2a protein_coding protein_coding MGP_LPJ_T0065526.1 MGP_LPJ_G0028192.1 mouse_genomes_project 4 47154254 47164006 + MGP_LPJ_P0065526 Murc protein_coding protein_coding MGP_LPJ_T0065740.1 MGP_LPJ_G0028254.1 mouse_genomes_project 4 58787457 58800333 - MGP_LPJ_P0065740 Inip protein_coding protein_coding MGP_LPJ_T0065741.1 MGP_LPJ_G0028254.1 mouse_genomes_project 4 58789181 58800277 - Inip protein_coding processed_transcript MGP_LPJ_T0065742.1 MGP_LPJ_G0028254.1 mouse_genomes_project 4 58797452 58800288 - Inip protein_coding processed_transcript MGP_LPJ_T0067677.1 MGP_LPJ_G0028702.1 mouse_genomes_project 4 129019408 129029319 + MGP_LPJ_P0067677 Sfpq protein_coding protein_coding MGP_LPJ_T0067678.1 MGP_LPJ_G0028702.1 mouse_genomes_project 4 129021467 129025399 + Sfpq protein_coding processed_transcript MGP_LPJ_T0067679.1 MGP_LPJ_G0028702.1 mouse_genomes_project 4 129021611 129036439 + Sfpq protein_coding processed_transcript MGP_LPJ_T0067680.1 MGP_LPJ_G0028702.1 mouse_genomes_project 4 129024006 129024697 + Sfpq protein_coding processed_transcript MGP_LPJ_T0067681.1 MGP_LPJ_G0028702.1 mouse_genomes_project 4 129024038 129026098 + Sfpq protein_coding processed_transcript MGP_LPJ_T0067682.1 MGP_LPJ_G0028702.1 mouse_genomes_project 4 129024527 129025632 + Sfpq protein_coding processed_transcript MGP_LPJ_T0066342.1 MGP_LPJ_G0028405.1 mouse_genomes_project 4 102022123 102084969 + MGP_LPJ_P0066342 Ak4 protein_coding protein_coding MGP_LPJ_T0066343.1 MGP_LPJ_G0028405.1 mouse_genomes_project 4 102022135 102084969 + MGP_LPJ_P0066343 Ak4 protein_coding protein_coding MGP_LPJ_T0066344.1 MGP_LPJ_G0028405.1 mouse_genomes_project 4 102022165 102084969 + MGP_LPJ_P0066344 Ak4 protein_coding protein_coding MGP_LPJ_T0066345.1 MGP_LPJ_G0028405.1 mouse_genomes_project 4 102027340 102081654 + Ak4 protein_coding processed_transcript MGP_LPJ_T0066346.1 MGP_LPJ_G0028405.1 mouse_genomes_project 4 102065210 102081753 + MGP_LPJ_P0066346 Ak4 protein_coding protein_coding MGP_LPJ_T0007976.1 MGP_LPJ_G0006516.1 mouse_genomes_project 4 131306483 131308342 + Gm15906 lincRNA lincRNA MGP_LPJ_T0064678.1 MGP_LPJ_G0028015.1 mouse_genomes_project 4 18850059 18858896 - MGP_LPJ_P0064678 Tstd3 protein_coding protein_coding MGP_LPJ_T0004514.1 MGP_LPJ_G0003927.1 mouse_genomes_project 4 103703253 103710234 - BB031773 antisense antisense MGP_LPJ_T0007926.1 MGP_LPJ_G0006481.1 mouse_genomes_project 4 103983277 104007042 + 4930456L15Rik lincRNA lincRNA MGP_LPJ_T0068655.1 MGP_LPJ_G0028910.1 mouse_genomes_project 4 141567034 141584798 - MGP_LPJ_P0068655 Ubxn10 protein_coding nonsense_mediated_decay MGP_LPJ_T0068656.1 MGP_LPJ_G0028910.1 mouse_genomes_project 4 141578114 141584842 - MGP_LPJ_P0068656 Ubxn10 protein_coding protein_coding MGP_LPJ_T0068657.1 MGP_LPJ_G0028910.1 mouse_genomes_project 4 141578114 141596736 - MGP_LPJ_P0068657 Ubxn10 protein_coding protein_coding MGP_LPJ_T0068658.1 MGP_LPJ_G0028910.1 mouse_genomes_project 4 141578414 141584433 - MGP_LPJ_P0068658 Ubxn10 protein_coding protein_coding MGP_LPJ_T0068662.1 MGP_LPJ_G0028910.1 mouse_genomes_project 4 141591453 141596705 - Ubxn10 protein_coding processed_transcript MGP_LPJ_T0010593.1 MGP_LPJ_G0008711.1 mouse_genomes_project 4 10119958 10120024 - Gm26250 miRNA miRNA MGP_LPJ_T0064656.1 MGP_LPJ_G0028008.1 mouse_genomes_project 4 16879991 16902855 + MGP_LPJ_P0064656 Slc7a13 protein_coding protein_coding MGP_LPJ_T0067624.1 MGP_LPJ_G0028691.1 mouse_genomes_project 4 128283263 128286830 - MGP_LPJ_P0067624 Tekt2 protein_coding protein_coding MGP_LPJ_T0067625.1 MGP_LPJ_G0028691.1 mouse_genomes_project 4 128283265 128286341 - MGP_LPJ_P0067625 Tekt2 protein_coding protein_coding MGP_LPJ_T0067626.1 MGP_LPJ_G0028691.1 mouse_genomes_project 4 128284850 128286772 - Tekt2 protein_coding retained_intron MGP_LPJ_T0067627.1 MGP_LPJ_G0028691.1 mouse_genomes_project 4 128285481 128286785 - MGP_LPJ_P0067627 Tekt2 protein_coding protein_coding MGP_LPJ_T0067628.1 MGP_LPJ_G0028691.1 mouse_genomes_project 4 128286025 128286577 - MGP_LPJ_P0067628 Tekt2 protein_coding protein_coding MGP_LPJ_T0067620.1 MGP_LPJ_G0028690.1 mouse_genomes_project 4 128277188 128282512 - Adprhl2 protein_coding processed_transcript MGP_LPJ_T0067621.1 MGP_LPJ_G0028690.1 mouse_genomes_project 4 128277188 128282846 - MGP_LPJ_P0067621 Adprhl2 protein_coding protein_coding MGP_LPJ_T0067622.1 MGP_LPJ_G0028690.1 mouse_genomes_project 4 128277193 128282610 - Adprhl2 protein_coding processed_transcript MGP_LPJ_T0067623.1 MGP_LPJ_G0028690.1 mouse_genomes_project 4 128279292 128282504 - Adprhl2 protein_coding processed_transcript MGP_LPJ_T0010618.1 MGP_LPJ_G0008736.1 mouse_genomes_project 4 67048485 67048556 + Gm44497 miRNA miRNA MGP_LPJ_T0004606.1 MGP_LPJ_G0003998.1 mouse_genomes_project 4 147827156 147828590 + Pramef12os antisense antisense MGP_LPJ_T0064661.1 MGP_LPJ_G0028011.1 mouse_genomes_project 4 17109249 17135054 + MGP_LPJ_P0064661 Ggh protein_coding protein_coding MGP_LPJ_T0065054.1 MGP_LPJ_G0028104.1 mouse_genomes_project 4 41013285 41019485 - MGP_LPJ_P0065054 Fam205c protein_coding protein_coding MGP_LPJ_T0065055.1 MGP_LPJ_G0028104.1 mouse_genomes_project 4 41013484 41019477 - MGP_LPJ_P0065055 Fam205c protein_coding protein_coding MGP_LPJ_T0065056.1 MGP_LPJ_G0028104.1 mouse_genomes_project 4 41016781 41019003 - Fam205c protein_coding processed_transcript MGP_LPJ_T0065057.1 MGP_LPJ_G0028104.1 mouse_genomes_project 4 41016969 41019516 - Fam205c protein_coding processed_transcript MGP_LPJ_T0066164.1 MGP_LPJ_G0028365.1 mouse_genomes_project 4 95014693 95030144 - MGP_LPJ_P0066164 Lrrc19 protein_coding protein_coding MGP_LPJ_T0066165.1 MGP_LPJ_G0028365.1 mouse_genomes_project 4 95014693 95030172 - MGP_LPJ_P0066165 Lrrc19 protein_coding protein_coding MGP_LPJ_T0014376.1 MGP_LPJ_G0012467.1 mouse_genomes_project 4 11670006 11670237 + processed_pseudogene processed_pseudogene MGP_LPJ_T0065755.1 MGP_LPJ_G0028260.1 mouse_genomes_project 4 61550347 61564009 + MGP_LPJ_P0065755 Slc31a2 protein_coding protein_coding MGP_LPJ_T0098037.1 MGP_LPJ_G0036318.1 mouse_genomes_project 4 132122659 132124305 + pseudogene pseudogene MGP_LPJ_T0066347.1 MGP_LPJ_G0028406.1 mouse_genomes_project 4 102111897 102226886 + MGP_LPJ_P0066347 Dnajc6 protein_coding protein_coding MGP_LPJ_T0066348.1 MGP_LPJ_G0028406.1 mouse_genomes_project 4 102122998 102265221 + MGP_LPJ_P0066348 Dnajc6 protein_coding protein_coding MGP_LPJ_T0066349.1 MGP_LPJ_G0028406.1 mouse_genomes_project 4 102123103 102232382 + MGP_LPJ_P0066349 Dnajc6 protein_coding protein_coding MGP_LPJ_T0066350.1 MGP_LPJ_G0028406.1 mouse_genomes_project 4 102123157 102219387 + Dnajc6 protein_coding processed_transcript MGP_LPJ_T0066351.1 MGP_LPJ_G0028406.1 mouse_genomes_project 4 102149229 102263160 + MGP_LPJ_P0066351 Dnajc6 protein_coding protein_coding MGP_LPJ_T0066352.1 MGP_LPJ_G0028406.1 mouse_genomes_project 4 102167528 102265204 + MGP_LPJ_P0066352 Dnajc6 protein_coding protein_coding MGP_LPJ_T0100742.1 MGP_LPJ_G0039005.1 mouse_genomes_project 4 31319182 31319307 - Gm24341 snoRNA snoRNA MGP_LPJ_T0014763.1 MGP_LPJ_G0012854.1 mouse_genomes_project 4 146649572 146650332 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004624.1 MGP_LPJ_G0004011.1 mouse_genomes_project 4 153732577 153736709 + Gm13070 antisense antisense MGP_LPJ_T0100747.1 MGP_LPJ_G0039010.1 mouse_genomes_project 4 39200022 39200099 - Gm22888 snoRNA snoRNA MGP_LPJ_T0004610.1 MGP_LPJ_G0004001.1 mouse_genomes_project 4 152277642 152278925 - Gm13209 antisense antisense MGP_LPJ_T0014672.1 MGP_LPJ_G0012763.1 mouse_genomes_project 4 116368604 116368977 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014627.1 MGP_LPJ_G0012718.1 mouse_genomes_project 4 99974447 99974661 - processed_pseudogene processed_pseudogene MGP_LPJ_T0066627.1 MGP_LPJ_G0028461.1 mouse_genomes_project 4 108928885 108946175 - MGP_LPJ_P0066627 Podn protein_coding protein_coding MGP_LPJ_T0066628.1 MGP_LPJ_G0028461.1 mouse_genomes_project 4 108928887 108938396 - MGP_LPJ_P0066628 Podn protein_coding protein_coding MGP_LPJ_T0066629.1 MGP_LPJ_G0028461.1 mouse_genomes_project 4 108928891 108942776 - MGP_LPJ_P0066629 Podn protein_coding protein_coding MGP_LPJ_T0066630.1 MGP_LPJ_G0028461.1 mouse_genomes_project 4 108928945 108946038 - MGP_LPJ_P0066630 Podn protein_coding protein_coding MGP_LPJ_T0066631.1 MGP_LPJ_G0028461.1 mouse_genomes_project 4 108928948 108946039 - Podn protein_coding processed_transcript MGP_LPJ_T0066632.1 MGP_LPJ_G0028461.1 mouse_genomes_project 4 108931795 108935607 - MGP_LPJ_P0066632 Podn protein_coding protein_coding MGP_LPJ_T0066633.1 MGP_LPJ_G0028461.1 mouse_genomes_project 4 108941103 108945071 - Podn protein_coding processed_transcript MGP_LPJ_T0066634.1 MGP_LPJ_G0028461.1 mouse_genomes_project 4 108941275 108946422 - Podn protein_coding processed_transcript MGP_LPJ_T0066876.1 MGP_LPJ_G0028510.1 mouse_genomes_project 4 116086725 116113805 - MGP_LPJ_P0066876 Cyp4x1 protein_coding protein_coding MGP_LPJ_T0014383.1 MGP_LPJ_G0012474.1 mouse_genomes_project 4 12902176 12902532 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014617.1 MGP_LPJ_G0012708.1 mouse_genomes_project 4 95413793 95414758 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099463.1 MGP_LPJ_G0037726.1 mouse_genomes_project 4 8012606 8012761 - Gm22940 snRNA snRNA MGP_LPJ_T0014354.1 MGP_LPJ_G0012445.1 mouse_genomes_project 4 3632922 3633390 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014571.1 MGP_LPJ_G0012662.1 mouse_genomes_project 4 76555716 76556753 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100767.1 MGP_LPJ_G0039030.1 mouse_genomes_project 4 62204822 62204956 + Gm25391 snoRNA snoRNA MGP_LPJ_T0014786.1 MGP_LPJ_G0012877.1 mouse_genomes_project 4 158193437 158194128 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008031.1 MGP_LPJ_G0006554.1 mouse_genomes_project 4 144417827 144420875 + Gm13074 lincRNA lincRNA MGP_LPJ_T0066519.1 MGP_LPJ_G0028444.1 mouse_genomes_project 4 107934013 107945274 + Cyb5rl protein_coding retained_intron MGP_LPJ_T0066520.1 MGP_LPJ_G0028444.1 mouse_genomes_project 4 107934013 107952843 + MGP_LPJ_P0066520 Cyb5rl protein_coding protein_coding MGP_LPJ_T0066521.1 MGP_LPJ_G0028444.1 mouse_genomes_project 4 107934021 107954578 + MGP_LPJ_P0066521 Cyb5rl protein_coding protein_coding MGP_LPJ_T0066522.1 MGP_LPJ_G0028444.1 mouse_genomes_project 4 107934021 107937941 + MGP_LPJ_P0066522 Cyb5rl protein_coding protein_coding MGP_LPJ_T0066523.1 MGP_LPJ_G0028444.1 mouse_genomes_project 4 107934044 107955285 + MGP_LPJ_P0066523 Cyb5rl protein_coding nonsense_mediated_decay MGP_LPJ_T0066524.1 MGP_LPJ_G0028444.1 mouse_genomes_project 4 107934049 107937957 + MGP_LPJ_P0066524 Cyb5rl protein_coding protein_coding MGP_LPJ_T0066525.1 MGP_LPJ_G0028444.1 mouse_genomes_project 4 107935630 107952843 + MGP_LPJ_P0066525 Cyb5rl protein_coding protein_coding MGP_LPJ_T0066526.1 MGP_LPJ_G0028444.1 mouse_genomes_project 4 107935668 107955008 + MGP_LPJ_P0066526 Cyb5rl protein_coding nonsense_mediated_decay MGP_LPJ_T0066527.1 MGP_LPJ_G0028444.1 mouse_genomes_project 4 107937193 107951780 + MGP_LPJ_P0066527 Cyb5rl protein_coding protein_coding MGP_LPJ_T0066528.1 MGP_LPJ_G0028444.1 mouse_genomes_project 4 107937895 107951315 + MGP_LPJ_P0066528 Cyb5rl protein_coding protein_coding MGP_LPJ_T0066529.1 MGP_LPJ_G0028444.1 mouse_genomes_project 4 107947987 107954794 + MGP_LPJ_P0066529 Cyb5rl protein_coding protein_coding MGP_LPJ_T0018060.1 MGP_LPJ_G0015501.1 mouse_genomes_project 4 159168444 159169353 - Gm20421 processed_transcript processed_transcript MGP_LPJ_T0068432.1 MGP_LPJ_G0028858.1 mouse_genomes_project 4 138288587 138312918 + MGP_LPJ_P0068432 Il22ra1 protein_coding protein_coding MGP_LPJ_T0010636.1 MGP_LPJ_G0008754.1 mouse_genomes_project 4 122181081 122181170 - Mir30c-1 miRNA miRNA MGP_LPJ_T0064659.1 MGP_LPJ_G0028010.1 mouse_genomes_project 4 17071965 17086527 + MGP_LPJ_P0064659 Ttpa protein_coding protein_coding MGP_LPJ_T0064660.1 MGP_LPJ_G0028010.1 mouse_genomes_project 4 17072470 17094957 + MGP_LPJ_P0064660 Ttpa protein_coding protein_coding MGP_LPJ_T0100817.1 MGP_LPJ_G0039080.1 mouse_genomes_project 4 158292635 158292779 + Gm26036 snoRNA snoRNA MGP_LPJ_T0065582.1 MGP_LPJ_G0028213.1 mouse_genomes_project 4 51751398 51881576 - MGP_LPJ_P0065582 Abca1 protein_coding protein_coding MGP_LPJ_T0065583.1 MGP_LPJ_G0028213.1 mouse_genomes_project 4 51756099 51761510 - Abca1 protein_coding processed_transcript MGP_LPJ_T0007867.1 MGP_LPJ_G0006431.1 mouse_genomes_project 4 54245749 54263357 - Gm12510 lincRNA lincRNA MGP_LPJ_T0001456.1 MGP_LPJ_G0001374.1 mouse_genomes_project 4 143286174 143288821 - TEC TEC MGP_LPJ_T0066453.1 MGP_LPJ_G0028430.1 mouse_genomes_project 4 106551490 106558223 + MGP_LPJ_P0066453 Gm12728 protein_coding protein_coding MGP_LPJ_T0066454.1 MGP_LPJ_G0028430.1 mouse_genomes_project 4 106552155 106558223 + MGP_LPJ_P0066454 Gm12728 protein_coding protein_coding MGP_LPJ_T0066455.1 MGP_LPJ_G0028430.1 mouse_genomes_project 4 106558013 106558506 + Gm12728 protein_coding translated_processed_pseudogene MGP_LPJ_T0014735.1 MGP_LPJ_G0012826.1 mouse_genomes_project 4 134535559 134535880 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100789.1 MGP_LPJ_G0039052.1 mouse_genomes_project 4 118296400 118296471 - Snord38a snoRNA snoRNA MGP_LPJ_T0066852.1 MGP_LPJ_G0028504.1 mouse_genomes_project 4 115869248 115871840 - MGP_LPJ_P0066852 Foxd2 protein_coding protein_coding MGP_LPJ_T0068517.1 MGP_LPJ_G0028877.1 mouse_genomes_project 4 139119110 139120838 + MGP_LPJ_P0068517 6030445D17Rik protein_coding protein_coding MGP_LPJ_T0001441.1 MGP_LPJ_G0001360.1 mouse_genomes_project 4 42954240 42956551 + TEC TEC MGP_LPJ_T0066951.1 MGP_LPJ_G0028531.1 mouse_genomes_project 4 117156810 117162605 - Rad54l protein_coding processed_transcript MGP_LPJ_T0066952.1 MGP_LPJ_G0028531.1 mouse_genomes_project 4 117159462 117191331 - MGP_LPJ_P0066952 Rad54l protein_coding protein_coding MGP_LPJ_T0066953.1 MGP_LPJ_G0028531.1 mouse_genomes_project 4 117159521 117191305 - MGP_LPJ_P0066953 Rad54l protein_coding protein_coding MGP_LPJ_T0066954.1 MGP_LPJ_G0028531.1 mouse_genomes_project 4 117173370 117190628 - Rad54l protein_coding processed_transcript MGP_LPJ_T0066955.1 MGP_LPJ_G0028531.1 mouse_genomes_project 4 117174669 117176167 - Rad54l protein_coding processed_transcript MGP_LPJ_T0066956.1 MGP_LPJ_G0028531.1 mouse_genomes_project 4 117181035 117191336 - Rad54l protein_coding processed_transcript MGP_LPJ_T0014671.1 MGP_LPJ_G0012762.1 mouse_genomes_project 4 116206686 116209515 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065119.1 MGP_LPJ_G0028113.1 mouse_genomes_project 4 41208489 41316315 + Unc13b protein_coding retained_intron MGP_LPJ_T0065120.1 MGP_LPJ_G0028113.1 mouse_genomes_project 4 41208505 41420066 + MGP_LPJ_P0065120 Unc13b protein_coding protein_coding MGP_LPJ_T0065121.1 MGP_LPJ_G0028113.1 mouse_genomes_project 4 41208512 41321661 + Unc13b protein_coding processed_transcript MGP_LPJ_T0065122.1 MGP_LPJ_G0028113.1 mouse_genomes_project 4 41208520 41318747 + Unc13b protein_coding retained_intron MGP_LPJ_T0065123.1 MGP_LPJ_G0028113.1 mouse_genomes_project 4 41208609 41418817 + MGP_LPJ_P0065123 Unc13b protein_coding protein_coding MGP_LPJ_T0065124.1 MGP_LPJ_G0028113.1 mouse_genomes_project 4 41208609 41418817 + MGP_LPJ_P0065124 Unc13b protein_coding protein_coding MGP_LPJ_T0065125.1 MGP_LPJ_G0028113.1 mouse_genomes_project 4 41208616 41418800 + MGP_LPJ_P0065125 Unc13b protein_coding protein_coding MGP_LPJ_T0065126.1 MGP_LPJ_G0028113.1 mouse_genomes_project 4 41268884 41389612 + Unc13b protein_coding processed_transcript MGP_LPJ_T0065127.1 MGP_LPJ_G0028113.1 mouse_genomes_project 4 41328153 41384378 + Unc13b protein_coding processed_transcript MGP_LPJ_T0065128.1 MGP_LPJ_G0028113.1 mouse_genomes_project 4 41330766 41388930 + MGP_LPJ_P0065128 Unc13b protein_coding protein_coding MGP_LPJ_T0065129.1 MGP_LPJ_G0028113.1 mouse_genomes_project 4 41366769 41420075 + MGP_LPJ_P0065129 Unc13b protein_coding unknown_likely_coding MGP_LPJ_T0065130.1 MGP_LPJ_G0028113.1 mouse_genomes_project 4 41381942 41384793 + Unc13b protein_coding retained_intron MGP_LPJ_T0065131.1 MGP_LPJ_G0028113.1 mouse_genomes_project 4 41385642 41400173 + Unc13b protein_coding retained_intron MGP_LPJ_T0065132.1 MGP_LPJ_G0028113.1 mouse_genomes_project 4 41402895 41409988 + Unc13b protein_coding retained_intron MGP_LPJ_T0065133.1 MGP_LPJ_G0028113.1 mouse_genomes_project 4 41409265 41412158 + MGP_LPJ_P0065133 Unc13b protein_coding protein_coding MGP_LPJ_T0065134.1 MGP_LPJ_G0028113.1 mouse_genomes_project 4 41410558 41415478 + Unc13b protein_coding retained_intron MGP_LPJ_T0004487.1 MGP_LPJ_G0003910.1 mouse_genomes_project 4 62671026 62686184 + Aknaos antisense antisense MGP_LPJ_T0067248.1 MGP_LPJ_G0028587.1 mouse_genomes_project 4 119868654 119875456 + MGP_LPJ_P0067248 Ebna1bp2 protein_coding protein_coding MGP_LPJ_T0067249.1 MGP_LPJ_G0028587.1 mouse_genomes_project 4 119868703 119869787 + Ebna1bp2 protein_coding processed_transcript MGP_LPJ_T0067250.1 MGP_LPJ_G0028587.1 mouse_genomes_project 4 119868705 119869518 + Ebna1bp2 protein_coding processed_transcript MGP_LPJ_T0067251.1 MGP_LPJ_G0028587.1 mouse_genomes_project 4 119869015 119871869 + MGP_LPJ_P0067251 Ebna1bp2 protein_coding protein_coding MGP_LPJ_T0067252.1 MGP_LPJ_G0028587.1 mouse_genomes_project 4 119869081 119873297 + Ebna1bp2 protein_coding processed_transcript MGP_LPJ_T0064478.1 MGP_LPJ_G0027963.1 mouse_genomes_project 4 3267973 3580343 - MGP_LPJ_P0064478 Tox protein_coding protein_coding MGP_LPJ_T0064479.1 MGP_LPJ_G0027963.1 mouse_genomes_project 4 3271007 3272313 - Tox protein_coding processed_transcript MGP_LPJ_T0064480.1 MGP_LPJ_G0027963.1 mouse_genomes_project 4 3326928 3580954 - Tox protein_coding retained_intron MGP_LPJ_T0064481.1 MGP_LPJ_G0027963.1 mouse_genomes_project 4 3408438 3580037 - Tox protein_coding retained_intron MGP_LPJ_T0004456.1 MGP_LPJ_G0003884.1 mouse_genomes_project 4 30111298 30123244 - Bach2os antisense antisense MGP_LPJ_T0004457.1 MGP_LPJ_G0003884.1 mouse_genomes_project 4 30114715 30123199 - Bach2os antisense antisense MGP_LPJ_T0004458.1 MGP_LPJ_G0003884.1 mouse_genomes_project 4 30117257 30123290 - Bach2os antisense antisense MGP_LPJ_T0001452.1 MGP_LPJ_G0001370.1 mouse_genomes_project 4 134149516 134154130 + TEC TEC MGP_LPJ_T0064869.1 MGP_LPJ_G0028059.1 mouse_genomes_project 4 32914872 32946158 - MGP_LPJ_P0064869 3110043O21Rik protein_coding protein_coding MGP_LPJ_T0064870.1 MGP_LPJ_G0028059.1 mouse_genomes_project 4 32914877 32946453 - MGP_LPJ_P0064870 3110043O21Rik protein_coding protein_coding MGP_LPJ_T0064871.1 MGP_LPJ_G0028059.1 mouse_genomes_project 4 32921760 32930124 - 3110043O21Rik protein_coding retained_intron MGP_LPJ_T0064872.1 MGP_LPJ_G0028059.1 mouse_genomes_project 4 32932791 32946505 - 3110043O21Rik protein_coding retained_intron MGP_LPJ_T0064873.1 MGP_LPJ_G0028059.1 mouse_genomes_project 4 32938738 32946453 - 3110043O21Rik protein_coding processed_transcript MGP_LPJ_T0064874.1 MGP_LPJ_G0028059.1 mouse_genomes_project 4 32938922 32946453 - 3110043O21Rik protein_coding processed_transcript MGP_LPJ_T0004472.1 MGP_LPJ_G0003897.1 mouse_genomes_project 4 43237225 43244933 - Gm12679 antisense antisense MGP_LPJ_T0067363.1 MGP_LPJ_G0028618.1 mouse_genomes_project 4 121530990 121537161 + MGP_LPJ_P0067363 Edn2 protein_coding protein_coding MGP_LPJ_T0014486.1 MGP_LPJ_G0012577.1 mouse_genomes_project 4 44781984 44782307 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102150.1 MGP_LPJ_G0040187.1 mouse_genomes_project 4 114109485 115186393 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0010643.1 MGP_LPJ_G0008761.1 mouse_genomes_project 4 128534558 128534617 + Mir7119 miRNA miRNA MGP_LPJ_T0068737.1 MGP_LPJ_G0028931.1 mouse_genomes_project 4 142551722 142578603 + MGP_LPJ_P0068737 Aldh4a1 protein_coding protein_coding MGP_LPJ_T0068738.1 MGP_LPJ_G0028931.1 mouse_genomes_project 4 142551750 142578600 + Aldh4a1 protein_coding processed_transcript MGP_LPJ_T0068739.1 MGP_LPJ_G0028931.1 mouse_genomes_project 4 142551965 142564471 + Aldh4a1 protein_coding processed_transcript MGP_LPJ_T0066767.1 MGP_LPJ_G0028485.1 mouse_genomes_project 4 110476404 110505217 - MGP_LPJ_P0066767 Rnf11 protein_coding protein_coding MGP_LPJ_T0066768.1 MGP_LPJ_G0028485.1 mouse_genomes_project 4 110478205 110505524 - MGP_LPJ_P0066768 Rnf11 protein_coding protein_coding MGP_LPJ_T0066769.1 MGP_LPJ_G0028485.1 mouse_genomes_project 4 110479590 110513246 - MGP_LPJ_P0066769 Rnf11 protein_coding protein_coding MGP_LPJ_T0007820.1 MGP_LPJ_G0006390.1 mouse_genomes_project 4 8765535 8773288 + Gm26895 lincRNA lincRNA MGP_LPJ_T0004506.1 MGP_LPJ_G0003921.1 mouse_genomes_project 4 98789585 98791035 + 0610025J13Rik antisense antisense MGP_LPJ_T0004507.1 MGP_LPJ_G0003921.1 mouse_genomes_project 4 98789635 98799854 + 0610025J13Rik antisense antisense MGP_LPJ_T0004508.1 MGP_LPJ_G0003921.1 mouse_genomes_project 4 98789635 98799854 + 0610025J13Rik antisense antisense MGP_LPJ_T0065522.1 MGP_LPJ_G0028191.1 mouse_genomes_project 4 47074136 47153871 + MGP_LPJ_P0065522 Tmeff1 protein_coding protein_coding MGP_LPJ_T0065523.1 MGP_LPJ_G0028191.1 mouse_genomes_project 4 47074318 47152822 + MGP_LPJ_P0065523 Tmeff1 protein_coding protein_coding MGP_LPJ_T0065524.1 MGP_LPJ_G0028191.1 mouse_genomes_project 4 47074504 47153207 + MGP_LPJ_P0065524 Tmeff1 protein_coding protein_coding MGP_LPJ_T0065525.1 MGP_LPJ_G0028191.1 mouse_genomes_project 4 47126299 47150975 + MGP_LPJ_P0065525 Tmeff1 protein_coding protein_coding MGP_LPJ_T0014736.1 MGP_LPJ_G0012827.1 mouse_genomes_project 4 135137979 135138264 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065625.1 MGP_LPJ_G0028226.1 mouse_genomes_project 4 55665985 55668266 + Fam206a protein_coding retained_intron MGP_LPJ_T0065626.1 MGP_LPJ_G0028226.1 mouse_genomes_project 4 55665989 55673242 + MGP_LPJ_P0065626 Fam206a protein_coding protein_coding MGP_LPJ_T0065627.1 MGP_LPJ_G0028226.1 mouse_genomes_project 4 55665992 55673242 + MGP_LPJ_P0065627 Fam206a protein_coding nonsense_mediated_decay MGP_LPJ_T0065628.1 MGP_LPJ_G0028226.1 mouse_genomes_project 4 55666258 55669588 + MGP_LPJ_P0065628 Fam206a protein_coding nonsense_mediated_decay MGP_LPJ_T0066682.1 MGP_LPJ_G0028471.1 mouse_genomes_project 4 109571493 109587753 + Orc1 protein_coding processed_transcript MGP_LPJ_T0066683.1 MGP_LPJ_G0028471.1 mouse_genomes_project 4 109571504 109587894 + Orc1 protein_coding processed_transcript MGP_LPJ_T0066684.1 MGP_LPJ_G0028471.1 mouse_genomes_project 4 109571524 109608315 + MGP_LPJ_P0066684 Orc1 protein_coding protein_coding MGP_LPJ_T0066685.1 MGP_LPJ_G0028471.1 mouse_genomes_project 4 109579289 109580072 + Orc1 protein_coding processed_transcript MGP_LPJ_T0066686.1 MGP_LPJ_G0028471.1 mouse_genomes_project 4 109596582 109598535 + Orc1 protein_coding processed_transcript MGP_LPJ_T0014657.1 MGP_LPJ_G0012748.1 mouse_genomes_project 4 109278614 109278922 + processed_pseudogene processed_pseudogene MGP_LPJ_T0067713.1 MGP_LPJ_G0028714.1 mouse_genomes_project 4 130368692 130369438 - MGP_LPJ_P0067713 Hmgb4 protein_coding protein_coding MGP_LPJ_T0014480.1 MGP_LPJ_G0012571.1 mouse_genomes_project 4 42624152 42624568 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001439.1 MGP_LPJ_G0001358.1 mouse_genomes_project 4 39753003 39753487 - TEC TEC MGP_LPJ_T0068934.1 MGP_LPJ_G0028981.1 mouse_genomes_project 4 146699362 146713096 - MGP_LPJ_P0068934 Oog4 protein_coding protein_coding MGP_LPJ_T0068935.1 MGP_LPJ_G0028981.1 mouse_genomes_project 4 146699363 146713076 - MGP_LPJ_P0068935 Oog4 protein_coding protein_coding MGP_LPJ_T0014702.1 MGP_LPJ_G0012793.1 mouse_genomes_project 4 122560949 122561372 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098253.1 MGP_LPJ_G0036534.1 mouse_genomes_project 4 9666776 9666883 + n-R5s182 rRNA rRNA MGP_LPJ_T0068054.1 MGP_LPJ_G0028777.1 mouse_genomes_project 4 134507061 134543117 - MGP_LPJ_P0068054 Gmeb1 protein_coding protein_coding MGP_LPJ_T0068055.1 MGP_LPJ_G0028777.1 mouse_genomes_project 4 134508924 134553913 - MGP_LPJ_P0068055 Gmeb1 protein_coding protein_coding MGP_LPJ_T0068056.1 MGP_LPJ_G0028777.1 mouse_genomes_project 4 134511003 134542475 - MGP_LPJ_P0068056 Gmeb1 protein_coding protein_coding MGP_LPJ_T0068057.1 MGP_LPJ_G0028777.1 mouse_genomes_project 4 134511655 134553994 - MGP_LPJ_P0068057 Gmeb1 protein_coding protein_coding MGP_LPJ_T0068058.1 MGP_LPJ_G0028777.1 mouse_genomes_project 4 134520223 134523620 - Gmeb1 protein_coding retained_intron MGP_LPJ_T0068059.1 MGP_LPJ_G0028777.1 mouse_genomes_project 4 134525406 134536682 - Gmeb1 protein_coding retained_intron MGP_LPJ_T0068060.1 MGP_LPJ_G0028777.1 mouse_genomes_project 4 134542386 134544875 - Gmeb1 protein_coding processed_transcript MGP_LPJ_T0065440.1 MGP_LPJ_G0028170.1 mouse_genomes_project 4 44698561 44701366 + MGP_LPJ_P0065440 Foxe1 protein_coding protein_coding MGP_LPJ_T0068811.1 MGP_LPJ_G0028949.1 mouse_genomes_project 4 144152150 144178731 - Szrd1 protein_coding processed_transcript MGP_LPJ_T0068812.1 MGP_LPJ_G0028949.1 mouse_genomes_project 4 144152150 144178731 - Szrd1 protein_coding processed_transcript MGP_LPJ_T0068813.1 MGP_LPJ_G0028949.1 mouse_genomes_project 4 144152150 144178722 - MGP_LPJ_P0068813 Szrd1 protein_coding protein_coding MGP_LPJ_T0068814.1 MGP_LPJ_G0028949.1 mouse_genomes_project 4 144152150 144178683 - MGP_LPJ_P0068814 Szrd1 protein_coding protein_coding MGP_LPJ_T0068815.1 MGP_LPJ_G0028949.1 mouse_genomes_project 4 144155699 144178696 - Szrd1 protein_coding processed_transcript MGP_LPJ_T0007963.1 MGP_LPJ_G0006508.1 mouse_genomes_project 4 127806311 127818220 - 2610028E06Rik lincRNA lincRNA MGP_LPJ_T0007964.1 MGP_LPJ_G0006508.1 mouse_genomes_project 4 127806311 127841546 - 2610028E06Rik lincRNA lincRNA MGP_LPJ_T0007965.1 MGP_LPJ_G0006508.1 mouse_genomes_project 4 127806657 127841653 - 2610028E06Rik lincRNA lincRNA MGP_LPJ_T0007966.1 MGP_LPJ_G0006508.1 mouse_genomes_project 4 127808875 127836405 - 2610028E06Rik lincRNA lincRNA MGP_LPJ_T0007967.1 MGP_LPJ_G0006508.1 mouse_genomes_project 4 127837810 127841653 - 2610028E06Rik lincRNA lincRNA MGP_LPJ_T0100779.1 MGP_LPJ_G0039042.1 mouse_genomes_project 4 89413557 89413697 - Gm26490 snoRNA snoRNA MGP_LPJ_T0014766.1 MGP_LPJ_G0012857.1 mouse_genomes_project 4 146949112 146949673 + processed_pseudogene processed_pseudogene MGP_LPJ_T0068085.1 MGP_LPJ_G0028782.1 mouse_genomes_project 4 134659397 134727264 - MGP_LPJ_P0068085 Phactr4 protein_coding protein_coding MGP_LPJ_T0068086.1 MGP_LPJ_G0028782.1 mouse_genomes_project 4 134659404 134727221 - MGP_LPJ_P0068086 Phactr4 protein_coding protein_coding MGP_LPJ_T0068087.1 MGP_LPJ_G0028782.1 mouse_genomes_project 4 134661725 134702794 - MGP_LPJ_P0068087 Phactr4 protein_coding protein_coding MGP_LPJ_T0068088.1 MGP_LPJ_G0028782.1 mouse_genomes_project 4 134664139 134673848 - Phactr4 protein_coding processed_transcript MGP_LPJ_T0068089.1 MGP_LPJ_G0028782.1 mouse_genomes_project 4 134674267 134727216 - MGP_LPJ_P0068089 Phactr4 protein_coding protein_coding MGP_LPJ_T0068090.1 MGP_LPJ_G0028782.1 mouse_genomes_project 4 134682181 134702782 - MGP_LPJ_P0068090 Phactr4 protein_coding protein_coding MGP_LPJ_T0102130.1 MGP_LPJ_G0040167.1 mouse_genomes_project 4 264283 284210 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0010602.1 MGP_LPJ_G0008720.1 mouse_genomes_project 4 34406085 34406166 - Mir876 miRNA miRNA MGP_LPJ_T0017999.1 MGP_LPJ_G0015464.1 mouse_genomes_project 4 56671963 56678073 - Gm12526 processed_transcript processed_transcript MGP_LPJ_T0064875.1 MGP_LPJ_G0028060.1 mouse_genomes_project 4 33437636 33584436 - MGP_LPJ_P0064875 Lingo2 protein_coding protein_coding MGP_LPJ_T0064876.1 MGP_LPJ_G0028060.1 mouse_genomes_project 4 33438395 34730709 - MGP_LPJ_P0064876 Lingo2 protein_coding protein_coding MGP_LPJ_T0064877.1 MGP_LPJ_G0028060.1 mouse_genomes_project 4 33438395 33885913 - MGP_LPJ_P0064877 Lingo2 protein_coding protein_coding MGP_LPJ_T0064878.1 MGP_LPJ_G0028060.1 mouse_genomes_project 4 33438395 33584436 - MGP_LPJ_P0064878 Lingo2 protein_coding protein_coding MGP_LPJ_T0064879.1 MGP_LPJ_G0028060.1 mouse_genomes_project 4 33438832 33797676 - MGP_LPJ_P0064879 Lingo2 protein_coding protein_coding MGP_LPJ_T0064880.1 MGP_LPJ_G0028060.1 mouse_genomes_project 4 33797673 34729972 - Lingo2 protein_coding processed_transcript MGP_LPJ_T0064881.1 MGP_LPJ_G0028060.1 mouse_genomes_project 4 34481799 34731230 - Lingo2 protein_coding processed_transcript MGP_LPJ_T0064882.1 MGP_LPJ_G0028060.1 mouse_genomes_project 4 34484536 34729953 - Lingo2 protein_coding processed_transcript MGP_LPJ_T0064883.1 MGP_LPJ_G0028060.1 mouse_genomes_project 4 34484781 34729975 - Lingo2 protein_coding processed_transcript MGP_LPJ_T0064884.1 MGP_LPJ_G0028060.1 mouse_genomes_project 4 34730585 34731233 - Lingo2 protein_coding processed_transcript MGP_LPJ_T0007845.1 MGP_LPJ_G0006414.1 mouse_genomes_project 4 38675418 38677663 - Gm6297 lincRNA lincRNA MGP_LPJ_T0001457.1 MGP_LPJ_G0001375.1 mouse_genomes_project 4 144289904 144291179 - TEC TEC MGP_LPJ_T0001458.1 MGP_LPJ_G0001375.1 mouse_genomes_project 4 144289910 144291179 - TEC TEC MGP_LPJ_T0067745.1 MGP_LPJ_G0028721.1 mouse_genomes_project 4 131083632 131116694 - MGP_LPJ_P0067745 Azin2 protein_coding protein_coding MGP_LPJ_T0067746.1 MGP_LPJ_G0028721.1 mouse_genomes_project 4 131085297 131116702 - MGP_LPJ_P0067746 Azin2 protein_coding protein_coding MGP_LPJ_T0067747.1 MGP_LPJ_G0028721.1 mouse_genomes_project 4 131085297 131116713 - MGP_LPJ_P0067747 Azin2 protein_coding protein_coding MGP_LPJ_T0067748.1 MGP_LPJ_G0028721.1 mouse_genomes_project 4 131099197 131116713 - Azin2 protein_coding retained_intron MGP_LPJ_T0067749.1 MGP_LPJ_G0028721.1 mouse_genomes_project 4 131099639 131115677 - MGP_LPJ_P0067749 Azin2 protein_coding protein_coding MGP_LPJ_T0067750.1 MGP_LPJ_G0028721.1 mouse_genomes_project 4 131100737 131116716 - Azin2 protein_coding retained_intron MGP_LPJ_T0067751.1 MGP_LPJ_G0028721.1 mouse_genomes_project 4 131114983 131116702 - Azin2 protein_coding retained_intron MGP_LPJ_T0014519.1 MGP_LPJ_G0012610.1 mouse_genomes_project 4 54078841 54079077 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014752.1 MGP_LPJ_G0012843.1 mouse_genomes_project 4 138938403 138938926 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100783.1 MGP_LPJ_G0039046.1 mouse_genomes_project 4 94863581 94863682 + Gm22804 snoRNA snoRNA MGP_LPJ_T0069312.1 MGP_LPJ_G0029076.1 mouse_genomes_project 4 156135904 156170328 - MGP_LPJ_P0069312 Espn protein_coding protein_coding MGP_LPJ_T0069313.1 MGP_LPJ_G0029076.1 mouse_genomes_project 4 156135909 156170492 - MGP_LPJ_P0069313 Espn protein_coding protein_coding MGP_LPJ_T0069314.1 MGP_LPJ_G0029076.1 mouse_genomes_project 4 156136430 156144532 - MGP_LPJ_P0069314 Espn protein_coding protein_coding MGP_LPJ_T0069315.1 MGP_LPJ_G0029076.1 mouse_genomes_project 4 156136441 156170343 - MGP_LPJ_P0069315 Espn protein_coding protein_coding MGP_LPJ_T0069316.1 MGP_LPJ_G0029076.1 mouse_genomes_project 4 156136443 156147472 - MGP_LPJ_P0069316 Espn protein_coding protein_coding MGP_LPJ_T0069317.1 MGP_LPJ_G0029076.1 mouse_genomes_project 4 156136455 156147944 - Espn protein_coding processed_transcript MGP_LPJ_T0069318.1 MGP_LPJ_G0029076.1 mouse_genomes_project 4 156136694 156151932 - MGP_LPJ_P0069318 Espn protein_coding protein_coding MGP_LPJ_T0069319.1 MGP_LPJ_G0029076.1 mouse_genomes_project 4 156136694 156151889 - MGP_LPJ_P0069319 Espn protein_coding protein_coding MGP_LPJ_T0069320.1 MGP_LPJ_G0029076.1 mouse_genomes_project 4 156136694 156151889 - MGP_LPJ_P0069320 Espn protein_coding protein_coding MGP_LPJ_T0069321.1 MGP_LPJ_G0029076.1 mouse_genomes_project 4 156136694 156151932 - MGP_LPJ_P0069321 Espn protein_coding protein_coding MGP_LPJ_T0069322.1 MGP_LPJ_G0029076.1 mouse_genomes_project 4 156136694 156151889 - MGP_LPJ_P0069322 Espn protein_coding protein_coding MGP_LPJ_T0069323.1 MGP_LPJ_G0029076.1 mouse_genomes_project 4 156136694 156151932 - MGP_LPJ_P0069323 Espn protein_coding protein_coding MGP_LPJ_T0069324.1 MGP_LPJ_G0029076.1 mouse_genomes_project 4 156136694 156151932 - MGP_LPJ_P0069324 Espn protein_coding protein_coding MGP_LPJ_T0069325.1 MGP_LPJ_G0029076.1 mouse_genomes_project 4 156136694 156151889 - MGP_LPJ_P0069325 Espn protein_coding protein_coding MGP_LPJ_T0069326.1 MGP_LPJ_G0029076.1 mouse_genomes_project 4 156136705 156147448 - Espn protein_coding processed_transcript MGP_LPJ_T0069327.1 MGP_LPJ_G0029076.1 mouse_genomes_project 4 156138472 156147473 - Espn protein_coding processed_transcript MGP_LPJ_T0069328.1 MGP_LPJ_G0029076.1 mouse_genomes_project 4 156139287 156167175 - MGP_LPJ_P0069328 Espn protein_coding protein_coding MGP_LPJ_T0069329.1 MGP_LPJ_G0029076.1 mouse_genomes_project 4 156143400 156147464 - Espn protein_coding processed_transcript MGP_LPJ_T0069330.1 MGP_LPJ_G0029076.1 mouse_genomes_project 4 156143748 156146837 - Espn protein_coding processed_transcript MGP_LPJ_T0008024.1 MGP_LPJ_G0006547.1 mouse_genomes_project 4 143350151 143355098 + Gm13016 lincRNA lincRNA MGP_LPJ_T0064670.1 MGP_LPJ_G0028014.1 mouse_genomes_project 4 18819162 18842340 + MGP_LPJ_P0064670 Ccnc protein_coding protein_coding MGP_LPJ_T0064671.1 MGP_LPJ_G0028014.1 mouse_genomes_project 4 18819187 18842340 + MGP_LPJ_P0064671 Ccnc protein_coding protein_coding MGP_LPJ_T0064672.1 MGP_LPJ_G0028014.1 mouse_genomes_project 4 18819187 18852601 + MGP_LPJ_P0064672 Ccnc protein_coding protein_coding MGP_LPJ_T0064673.1 MGP_LPJ_G0028014.1 mouse_genomes_project 4 18819202 18829257 + Ccnc protein_coding processed_transcript MGP_LPJ_T0064674.1 MGP_LPJ_G0028014.1 mouse_genomes_project 4 18819214 18838703 + Ccnc protein_coding processed_transcript MGP_LPJ_T0064675.1 MGP_LPJ_G0028014.1 mouse_genomes_project 4 18819216 18838703 + MGP_LPJ_P0064675 Ccnc protein_coding protein_coding MGP_LPJ_T0064676.1 MGP_LPJ_G0028014.1 mouse_genomes_project 4 18819219 18823312 + Ccnc protein_coding processed_transcript MGP_LPJ_T0064677.1 MGP_LPJ_G0028014.1 mouse_genomes_project 4 18819228 18839294 + Ccnc protein_coding processed_transcript MGP_LPJ_T0067876.1 MGP_LPJ_G0028745.1 mouse_genomes_project 4 131833688 131837637 - MGP_LPJ_P0067876 protein_coding protein_coding MGP_LPJ_T0067877.1 MGP_LPJ_G0028745.1 mouse_genomes_project 4 131834306 131835568 - protein_coding processed_transcript MGP_LPJ_T0067878.1 MGP_LPJ_G0028745.1 mouse_genomes_project 4 131835876 131837614 - protein_coding retained_intron MGP_LPJ_T0067879.1 MGP_LPJ_G0028745.1 mouse_genomes_project 4 131836635 131837634 - MGP_LPJ_P0067879 protein_coding protein_coding MGP_LPJ_T0067880.1 MGP_LPJ_G0028745.1 mouse_genomes_project 4 131836779 131837618 - protein_coding processed_transcript MGP_LPJ_T0068336.1 MGP_LPJ_G0028837.1 mouse_genomes_project 4 136930686 136938636 + MGP_LPJ_P0068336 Stmn1 protein_coding protein_coding MGP_LPJ_T0068337.1 MGP_LPJ_G0028837.1 mouse_genomes_project 4 136930741 136938197 + MGP_LPJ_P0068337 Stmn1 protein_coding unknown_likely_coding MGP_LPJ_T0068338.1 MGP_LPJ_G0028837.1 mouse_genomes_project 4 136930765 136933050 + Stmn1 protein_coding processed_transcript MGP_LPJ_T0068339.1 MGP_LPJ_G0028837.1 mouse_genomes_project 4 136930772 136935499 + MGP_LPJ_P0068339 Stmn1 protein_coding protein_coding MGP_LPJ_T0068340.1 MGP_LPJ_G0028837.1 mouse_genomes_project 4 136930775 136936238 + MGP_LPJ_P0068340 Stmn1 protein_coding protein_coding MGP_LPJ_T0068341.1 MGP_LPJ_G0028837.1 mouse_genomes_project 4 136932109 136936073 + MGP_LPJ_P0068341 Stmn1 protein_coding protein_coding MGP_LPJ_T0011595.1 MGP_LPJ_G0009713.1 mouse_genomes_project 4 118042578 118042845 + Gm25435 misc_RNA misc_RNA MGP_LPJ_T0068958.1 MGP_LPJ_G0029003.1 mouse_genomes_project 4 148189956 148200831 - MGP_LPJ_P0068958 Gm438 protein_coding protein_coding MGP_LPJ_T0014603.1 MGP_LPJ_G0012694.1 mouse_genomes_project 4 90823084 90823708 - processed_pseudogene processed_pseudogene MGP_LPJ_T0067385.1 MGP_LPJ_G0028625.1 mouse_genomes_project 4 122107161 122158300 - MGP_LPJ_P0067385 Kcnq4 protein_coding protein_coding MGP_LPJ_T0067386.1 MGP_LPJ_G0028625.1 mouse_genomes_project 4 122108916 122158228 - MGP_LPJ_P0067386 Kcnq4 protein_coding unknown_likely_coding MGP_LPJ_T0067387.1 MGP_LPJ_G0028625.1 mouse_genomes_project 4 122126269 122159917 - Kcnq4 protein_coding processed_transcript MGP_LPJ_T0064662.1 MGP_LPJ_G0028012.1 mouse_genomes_project 4 17179399 17890573 - MGP_LPJ_P0064662 Nkain3 protein_coding protein_coding MGP_LPJ_T0064663.1 MGP_LPJ_G0028012.1 mouse_genomes_project 4 17303857 17890856 - MGP_LPJ_P0064663 Nkain3 protein_coding protein_coding MGP_LPJ_T0014510.1 MGP_LPJ_G0012601.1 mouse_genomes_project 4 52415040 52416089 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014670.1 MGP_LPJ_G0012761.1 mouse_genomes_project 4 112930025 112931015 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100811.1 MGP_LPJ_G0039074.1 mouse_genomes_project 4 134654161 134654366 - Snora73b snoRNA snoRNA MGP_LPJ_T0014782.1 MGP_LPJ_G0012873.1 mouse_genomes_project 4 154101039 154101448 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004491.1 MGP_LPJ_G0003914.1 mouse_genomes_project 4 82621193 82622100 + Gm11269 antisense antisense MGP_LPJ_T0014389.1 MGP_LPJ_G0012480.1 mouse_genomes_project 4 14000555 14001528 - processed_pseudogene processed_pseudogene MGP_LPJ_T0066473.1 MGP_LPJ_G0028438.1 mouse_genomes_project 4 107499825 107516516 - MGP_LPJ_P0066473 Ttc4 protein_coding protein_coding MGP_LPJ_T0066474.1 MGP_LPJ_G0028438.1 mouse_genomes_project 4 107499829 107516258 - Ttc4 protein_coding processed_transcript MGP_LPJ_T0066475.1 MGP_LPJ_G0028438.1 mouse_genomes_project 4 107500002 107505114 - Ttc4 protein_coding processed_transcript MGP_LPJ_T0066476.1 MGP_LPJ_G0028438.1 mouse_genomes_project 4 107500633 107516438 - MGP_LPJ_P0066476 Ttc4 protein_coding protein_coding MGP_LPJ_T0066477.1 MGP_LPJ_G0028438.1 mouse_genomes_project 4 107505210 107509248 - Ttc4 protein_coding processed_transcript MGP_LPJ_T0066478.1 MGP_LPJ_G0028438.1 mouse_genomes_project 4 107505713 107508596 - Ttc4 protein_coding processed_transcript MGP_LPJ_T0066479.1 MGP_LPJ_G0028438.1 mouse_genomes_project 4 107508027 107516463 - MGP_LPJ_P0066479 Ttc4 protein_coding protein_coding MGP_LPJ_T0066480.1 MGP_LPJ_G0028438.1 mouse_genomes_project 4 107509302 107516473 - Ttc4 protein_coding processed_transcript MGP_LPJ_T0066481.1 MGP_LPJ_G0028438.1 mouse_genomes_project 4 107513853 107516461 - Ttc4 protein_coding processed_transcript MGP_LPJ_T0067015.1 MGP_LPJ_G0028543.1 mouse_genomes_project 4 117748707 117763675 - MGP_LPJ_P0067015 protein_coding protein_coding MGP_LPJ_T0067016.1 MGP_LPJ_G0028543.1 mouse_genomes_project 4 117748708 117763391 - protein_coding processed_transcript MGP_LPJ_T0067017.1 MGP_LPJ_G0028543.1 mouse_genomes_project 4 117748708 117750196 - protein_coding processed_transcript MGP_LPJ_T0067018.1 MGP_LPJ_G0028543.1 mouse_genomes_project 4 117751986 117761469 - MGP_LPJ_P0067018 protein_coding protein_coding MGP_LPJ_T0065535.1 MGP_LPJ_G0028197.1 mouse_genomes_project 4 48072579 48081082 - MGP_LPJ_P0065535 Mrpl50 protein_coding protein_coding MGP_LPJ_T0068219.1 MGP_LPJ_G0028815.1 mouse_genomes_project 4 136073747 136148302 - MGP_LPJ_P0068219 Arid1a protein_coding protein_coding MGP_LPJ_T0068220.1 MGP_LPJ_G0028815.1 mouse_genomes_project 4 136073747 136148302 - MGP_LPJ_P0068220 Arid1a protein_coding protein_coding MGP_LPJ_T0068221.1 MGP_LPJ_G0028815.1 mouse_genomes_project 4 136074680 136153006 - MGP_LPJ_P0068221 Arid1a protein_coding protein_coding MGP_LPJ_T0068222.1 MGP_LPJ_G0028815.1 mouse_genomes_project 4 136084221 136117419 - Arid1a protein_coding retained_intron MGP_LPJ_T0068223.1 MGP_LPJ_G0028815.1 mouse_genomes_project 4 136113729 136115143 - Arid1a protein_coding retained_intron MGP_LPJ_T0068224.1 MGP_LPJ_G0028815.1 mouse_genomes_project 4 136115145 136118248 - MGP_LPJ_P0068224 Arid1a protein_coding protein_coding MGP_LPJ_T0014576.1 MGP_LPJ_G0012667.1 mouse_genomes_project 4 79861758 79862816 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004533.1 MGP_LPJ_G0003940.1 mouse_genomes_project 4 116939888 116940148 - Gm29434 antisense antisense MGP_LPJ_T0069092.1 MGP_LPJ_G0029033.1 mouse_genomes_project 4 152350779 152379647 + MGP_LPJ_P0069092 Gm572 protein_coding protein_coding MGP_LPJ_T0066456.1 MGP_LPJ_G0028431.1 mouse_genomes_project 4 107128506 107258428 + MGP_LPJ_P0066456 Usp24 protein_coding protein_coding MGP_LPJ_T0066457.1 MGP_LPJ_G0028431.1 mouse_genomes_project 4 107128513 107175686 + Usp24 protein_coding retained_intron MGP_LPJ_T0066458.1 MGP_LPJ_G0028431.1 mouse_genomes_project 4 107128527 107258433 + MGP_LPJ_P0066458 Usp24 protein_coding protein_coding MGP_LPJ_T0066459.1 MGP_LPJ_G0028431.1 mouse_genomes_project 4 107245606 107247966 + Usp24 protein_coding processed_transcript MGP_LPJ_T0065638.1 MGP_LPJ_G0028228.1 mouse_genomes_project 4 55734778 55821929 - MGP_LPJ_P0065638 Tmem245 protein_coding protein_coding MGP_LPJ_T0065639.1 MGP_LPJ_G0028228.1 mouse_genomes_project 4 55748366 55811473 - Tmem245 protein_coding processed_transcript MGP_LPJ_T0065640.1 MGP_LPJ_G0028228.1 mouse_genomes_project 4 55748366 55796272 - MGP_LPJ_P0065640 Tmem245 protein_coding protein_coding MGP_LPJ_T0065641.1 MGP_LPJ_G0028228.1 mouse_genomes_project 4 55748737 55821903 - MGP_LPJ_P0065641 Tmem245 protein_coding protein_coding MGP_LPJ_T0065642.1 MGP_LPJ_G0028228.1 mouse_genomes_project 4 55754122 55821916 - Tmem245 protein_coding processed_transcript MGP_LPJ_T0066460.1 MGP_LPJ_G0028432.1 mouse_genomes_project 4 107259439 107284241 - MGP_LPJ_P0066460 Pcsk9 protein_coding protein_coding MGP_LPJ_T0067596.1 MGP_LPJ_G0028686.1 mouse_genomes_project 4 128106805 128152183 - MGP_LPJ_P0067596 Thrap3 protein_coding protein_coding MGP_LPJ_T0067597.1 MGP_LPJ_G0028686.1 mouse_genomes_project 4 128106988 128121629 - MGP_LPJ_P0067597 Thrap3 protein_coding protein_coding MGP_LPJ_T0067598.1 MGP_LPJ_G0028686.1 mouse_genomes_project 4 128107002 128112457 - Thrap3 protein_coding processed_transcript MGP_LPJ_T0067599.1 MGP_LPJ_G0028686.1 mouse_genomes_project 4 128110376 128152060 - MGP_LPJ_P0067599 Thrap3 protein_coding unknown_likely_coding MGP_LPJ_T0067600.1 MGP_LPJ_G0028686.1 mouse_genomes_project 4 128112028 128119700 - MGP_LPJ_P0067600 Thrap3 protein_coding nonsense_mediated_decay MGP_LPJ_T0067601.1 MGP_LPJ_G0028686.1 mouse_genomes_project 4 128128140 128141894 - MGP_LPJ_P0067601 Thrap3 protein_coding nonsense_mediated_decay MGP_LPJ_T0067602.1 MGP_LPJ_G0028686.1 mouse_genomes_project 4 128128316 128150564 - MGP_LPJ_P0067602 Thrap3 protein_coding protein_coding MGP_LPJ_T0067603.1 MGP_LPJ_G0028686.1 mouse_genomes_project 4 128128325 128152012 - MGP_LPJ_P0067603 Thrap3 protein_coding protein_coding MGP_LPJ_T0067604.1 MGP_LPJ_G0028686.1 mouse_genomes_project 4 128133506 128152046 - Thrap3 protein_coding retained_intron MGP_LPJ_T0067605.1 MGP_LPJ_G0028686.1 mouse_genomes_project 4 128133687 128152082 - Thrap3 protein_coding retained_intron MGP_LPJ_T0067606.1 MGP_LPJ_G0028686.1 mouse_genomes_project 4 128133925 128152070 - MGP_LPJ_P0067606 Thrap3 protein_coding protein_coding MGP_LPJ_T0067607.1 MGP_LPJ_G0028686.1 mouse_genomes_project 4 128133931 128151799 - MGP_LPJ_P0067607 Thrap3 protein_coding protein_coding MGP_LPJ_T0067608.1 MGP_LPJ_G0028686.1 mouse_genomes_project 4 128133937 128151813 - MGP_LPJ_P0067608 Thrap3 protein_coding protein_coding MGP_LPJ_T0067609.1 MGP_LPJ_G0028686.1 mouse_genomes_project 4 128141421 128152093 - Thrap3 protein_coding processed_transcript MGP_LPJ_T0067775.1 MGP_LPJ_G0028726.1 mouse_genomes_project 4 131308430 131316039 + MGP_LPJ_P0067775 Fndc5 protein_coding protein_coding MGP_LPJ_T0065408.1 MGP_LPJ_G0028164.1 mouse_genomes_project 4 44211675 44230893 + Ccdc180 protein_coding processed_transcript MGP_LPJ_T0065409.1 MGP_LPJ_G0028164.1 mouse_genomes_project 4 44211675 44273863 + MGP_LPJ_P0065409 Ccdc180 protein_coding protein_coding MGP_LPJ_T0065410.1 MGP_LPJ_G0028164.1 mouse_genomes_project 4 44212224 44273856 + MGP_LPJ_P0065410 Ccdc180 protein_coding protein_coding MGP_LPJ_T0065411.1 MGP_LPJ_G0028164.1 mouse_genomes_project 4 44236218 44243809 + MGP_LPJ_P0065411 Ccdc180 protein_coding protein_coding MGP_LPJ_T0066445.1 MGP_LPJ_G0028425.1 mouse_genomes_project 4 105542472 105577685 - C8a protein_coding processed_transcript MGP_LPJ_T0066446.1 MGP_LPJ_G0028425.1 mouse_genomes_project 4 105542472 105598593 - MGP_LPJ_P0066446 C8a protein_coding protein_coding MGP_LPJ_T0066447.1 MGP_LPJ_G0028425.1 mouse_genomes_project 4 105544302 105598551 - MGP_LPJ_P0066447 C8a protein_coding protein_coding MGP_LPJ_T0007868.1 MGP_LPJ_G0006432.1 mouse_genomes_project 4 54363600 54403559 + Gm12511 lincRNA lincRNA MGP_LPJ_T0001462.1 MGP_LPJ_G0001379.1 mouse_genomes_project 4 155922303 155922725 - TEC TEC MGP_LPJ_T0069430.1 MGP_LPJ_G0029094.1 mouse_genomes_project 4 158208826 158253669 - MGP_LPJ_P0069430 Trp73 protein_coding protein_coding MGP_LPJ_T0069431.1 MGP_LPJ_G0029094.1 mouse_genomes_project 4 158211085 158253669 - MGP_LPJ_P0069431 Trp73 protein_coding protein_coding MGP_LPJ_T0069432.1 MGP_LPJ_G0029094.1 mouse_genomes_project 4 158211562 158253663 - MGP_LPJ_P0069432 Trp73 protein_coding nonsense_mediated_decay MGP_LPJ_T0069433.1 MGP_LPJ_G0029094.1 mouse_genomes_project 4 158211564 158261392 - MGP_LPJ_P0069433 Trp73 protein_coding protein_coding MGP_LPJ_T0069434.1 MGP_LPJ_G0029094.1 mouse_genomes_project 4 158217018 158239777 - MGP_LPJ_P0069434 Trp73 protein_coding protein_coding MGP_LPJ_T0069435.1 MGP_LPJ_G0029094.1 mouse_genomes_project 4 158220271 158274285 - MGP_LPJ_P0069435 Trp73 protein_coding protein_coding MGP_LPJ_T0067143.1 MGP_LPJ_G0028568.1 mouse_genomes_project 4 119023225 119033330 + MGP_LPJ_P0067143 Slc6a9 protein_coding protein_coding MGP_LPJ_T0067144.1 MGP_LPJ_G0028568.1 mouse_genomes_project 4 119023563 119066578 + MGP_LPJ_P0067144 Slc6a9 protein_coding nonsense_mediated_decay MGP_LPJ_T0067145.1 MGP_LPJ_G0028568.1 mouse_genomes_project 4 119023597 119059592 + MGP_LPJ_P0067145 Slc6a9 protein_coding protein_coding MGP_LPJ_T0067146.1 MGP_LPJ_G0028568.1 mouse_genomes_project 4 119023668 119048531 + Slc6a9 protein_coding processed_transcript MGP_LPJ_T0067147.1 MGP_LPJ_G0028568.1 mouse_genomes_project 4 119039413 119055359 + MGP_LPJ_P0067147 Slc6a9 protein_coding protein_coding MGP_LPJ_T0067148.1 MGP_LPJ_G0028568.1 mouse_genomes_project 4 119039419 119055359 + MGP_LPJ_P0067148 Slc6a9 protein_coding protein_coding MGP_LPJ_T0067149.1 MGP_LPJ_G0028568.1 mouse_genomes_project 4 119039590 119059775 + MGP_LPJ_P0067149 Slc6a9 protein_coding protein_coding MGP_LPJ_T0067150.1 MGP_LPJ_G0028568.1 mouse_genomes_project 4 119045714 119048787 + MGP_LPJ_P0067150 Slc6a9 protein_coding protein_coding MGP_LPJ_T0067151.1 MGP_LPJ_G0028568.1 mouse_genomes_project 4 119045766 119046250 + Slc6a9 protein_coding processed_transcript MGP_LPJ_T0067165.1 MGP_LPJ_G0028568.1 mouse_genomes_project 4 119065463 119066580 + Slc6a9 protein_coding retained_intron MGP_LPJ_T0067702.1 MGP_LPJ_G0028707.1 mouse_genomes_project 4 129277193 129281203 + MGP_LPJ_P0067702 Smim12 protein_coding protein_coding MGP_LPJ_T0066703.1 MGP_LPJ_G0028476.1 mouse_genomes_project 4 109829600 109857472 + MGP_LPJ_P0066703 Txndc12 protein_coding protein_coding MGP_LPJ_T0066704.1 MGP_LPJ_G0028476.1 mouse_genomes_project 4 109829634 109841435 + Txndc12 protein_coding processed_transcript MGP_LPJ_T0066707.1 MGP_LPJ_G0028476.1 mouse_genomes_project 4 109852831 109854627 + Txndc12 protein_coding processed_transcript MGP_LPJ_T0069155.1 MGP_LPJ_G0029046.1 mouse_genomes_project 4 153364680 153452912 + MGP_LPJ_P0069155 Clstn1 protein_coding protein_coding MGP_LPJ_T0069156.1 MGP_LPJ_G0029046.1 mouse_genomes_project 4 153364850 153451912 + MGP_LPJ_P0069156 Clstn1 protein_coding protein_coding MGP_LPJ_T0069157.1 MGP_LPJ_G0029046.1 mouse_genomes_project 4 153364894 153452916 + MGP_LPJ_P0069157 Clstn1 protein_coding unknown_likely_coding MGP_LPJ_T0069158.1 MGP_LPJ_G0029046.1 mouse_genomes_project 4 153365460 153424242 + Clstn1 protein_coding processed_transcript MGP_LPJ_T0069159.1 MGP_LPJ_G0029046.1 mouse_genomes_project 4 153424046 153429370 + Clstn1 protein_coding retained_intron MGP_LPJ_T0008021.1 MGP_LPJ_G0006545.1 mouse_genomes_project 4 142866613 142876844 + Gm13028 lincRNA lincRNA MGP_LPJ_T0068472.1 MGP_LPJ_G0028867.1 mouse_genomes_project 4 138568796 138582380 - MGP_LPJ_P0068472 Pithd1 protein_coding protein_coding MGP_LPJ_T0068473.1 MGP_LPJ_G0028867.1 mouse_genomes_project 4 138569402 138581054 - Pithd1 protein_coding processed_transcript MGP_LPJ_T0068474.1 MGP_LPJ_G0028867.1 mouse_genomes_project 4 138569730 138572593 - Pithd1 protein_coding retained_intron MGP_LPJ_T0068475.1 MGP_LPJ_G0028867.1 mouse_genomes_project 4 138569732 138581438 - MGP_LPJ_P0068475 Pithd1 protein_coding protein_coding MGP_LPJ_T0068476.1 MGP_LPJ_G0028867.1 mouse_genomes_project 4 138570546 138582033 - MGP_LPJ_P0068476 Pithd1 protein_coding protein_coding MGP_LPJ_T0068477.1 MGP_LPJ_G0028867.1 mouse_genomes_project 4 138572020 138582197 - Pithd1 protein_coding retained_intron MGP_LPJ_T0068478.1 MGP_LPJ_G0028867.1 mouse_genomes_project 4 138581529 138582203 - Pithd1 protein_coding processed_transcript MGP_LPJ_T0064521.1 MGP_LPJ_G0027970.1 mouse_genomes_project 4 7582523 7611231 + MGP_LPJ_P0064521 2610301B20Rik protein_coding protein_coding MGP_LPJ_T0064522.1 MGP_LPJ_G0027970.1 mouse_genomes_project 4 7582550 7605277 + 2610301B20Rik protein_coding processed_transcript MGP_LPJ_T0064523.1 MGP_LPJ_G0027970.1 mouse_genomes_project 4 7582590 7609890 + 2610301B20Rik protein_coding processed_transcript MGP_LPJ_T0064524.1 MGP_LPJ_G0027970.1 mouse_genomes_project 4 7582593 7611235 + MGP_LPJ_P0064524 2610301B20Rik protein_coding protein_coding MGP_LPJ_T0064525.1 MGP_LPJ_G0027970.1 mouse_genomes_project 4 7590356 7602568 + 2610301B20Rik protein_coding processed_transcript MGP_LPJ_T0102155.1 MGP_LPJ_G0040192.1 mouse_genomes_project 4 116630402 116670676 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0014692.1 MGP_LPJ_G0012783.1 mouse_genomes_project 4 119759455 119760047 + processed_pseudogene processed_pseudogene MGP_LPJ_T0067503.1 MGP_LPJ_G0028659.1 mouse_genomes_project 4 125701825 125721290 + MGP_LPJ_P0067503 Rragc protein_coding protein_coding MGP_LPJ_T0067504.1 MGP_LPJ_G0028659.1 mouse_genomes_project 4 125701853 125721286 + MGP_LPJ_P0067504 Rragc protein_coding nonsense_mediated_decay MGP_LPJ_T0067506.1 MGP_LPJ_G0028659.1 mouse_genomes_project 4 125703462 125705367 + Rragc protein_coding processed_transcript MGP_LPJ_T0067507.1 MGP_LPJ_G0028659.1 mouse_genomes_project 4 125705282 125714328 + Rragc protein_coding retained_intron MGP_LPJ_T0067508.1 MGP_LPJ_G0028659.1 mouse_genomes_project 4 125705657 125719839 + Rragc protein_coding processed_transcript MGP_LPJ_T0069629.1 MGP_LPJ_G0029130.1 mouse_genomes_project 4 160075405 160080730 - MGP_LPJ_P0069629 Tmem88b protein_coding protein_coding MGP_LPJ_T0014363.1 MGP_LPJ_G0012454.1 mouse_genomes_project 4 7511958 7513144 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010633.1 MGP_LPJ_G0008751.1 mouse_genomes_project 4 118734954 118735028 + Gm25559 miRNA miRNA MGP_LPJ_T0099466.1 MGP_LPJ_G0037729.1 mouse_genomes_project 4 14555869 14555972 - Gm23384 snRNA snRNA MGP_LPJ_T0064414.1 MGP_LPJ_G0027949.1 mouse_genomes_project 4 194025 317570 + MGP_LPJ_P0064414 Lyn protein_coding protein_coding MGP_LPJ_T0064415.1 MGP_LPJ_G0027949.1 mouse_genomes_project 4 194037 317569 + MGP_LPJ_P0064415 Lyn protein_coding protein_coding MGP_LPJ_T0064416.1 MGP_LPJ_G0027949.1 mouse_genomes_project 4 194040 264658 + Lyn protein_coding processed_transcript MGP_LPJ_T0067574.1 MGP_LPJ_G0028681.1 mouse_genomes_project 4 127994385 128030106 + MGP_LPJ_P0067574 Oscp1 protein_coding protein_coding MGP_LPJ_T0067575.1 MGP_LPJ_G0028681.1 mouse_genomes_project 4 127994501 128026337 + MGP_LPJ_P0067575 Oscp1 protein_coding unknown_likely_coding MGP_LPJ_T0067576.1 MGP_LPJ_G0028681.1 mouse_genomes_project 4 128002279 128026340 + Oscp1 protein_coding processed_transcript MGP_LPJ_T0067577.1 MGP_LPJ_G0028681.1 mouse_genomes_project 4 128019563 128021059 + Oscp1 protein_coding processed_transcript MGP_LPJ_T0067578.1 MGP_LPJ_G0028681.1 mouse_genomes_project 4 128025577 128026558 + Oscp1 protein_coding processed_transcript MGP_LPJ_T0067450.1 MGP_LPJ_G0028644.1 mouse_genomes_project 4 124802215 124827297 + MGP_LPJ_P0067450 Bmp8b protein_coding protein_coding MGP_LPJ_T0067453.1 MGP_LPJ_G0028644.1 mouse_genomes_project 4 124820492 124833280 + Bmp8b protein_coding processed_transcript MGP_LPJ_T0014545.1 MGP_LPJ_G0012636.1 mouse_genomes_project 4 69338266 69339004 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014485.1 MGP_LPJ_G0012576.1 mouse_genomes_project 4 44620676 44623414 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065898.1 MGP_LPJ_G0028300.1 mouse_genomes_project 4 73352534 73431317 - MGP_LPJ_P0065898 Rasef protein_coding protein_coding MGP_LPJ_T0065899.1 MGP_LPJ_G0028300.1 mouse_genomes_project 4 73352534 73431424 - MGP_LPJ_P0065899 Rasef protein_coding protein_coding MGP_LPJ_T0066263.1 MGP_LPJ_G0028386.1 mouse_genomes_project 4 99218260 99225274 + MGP_LPJ_P0066263 L1td1 protein_coding protein_coding MGP_LPJ_T0066264.1 MGP_LPJ_G0028386.1 mouse_genomes_project 4 99218274 99230069 + MGP_LPJ_P0066264 L1td1 protein_coding protein_coding MGP_LPJ_T0066265.1 MGP_LPJ_G0028386.1 mouse_genomes_project 4 99218319 99225190 + MGP_LPJ_P0066265 L1td1 protein_coding protein_coding MGP_LPJ_T0066266.1 MGP_LPJ_G0028386.1 mouse_genomes_project 4 99224832 99229705 + MGP_LPJ_P0066266 L1td1 protein_coding protein_coding MGP_LPJ_T0014562.1 MGP_LPJ_G0012653.1 mouse_genomes_project 4 74819027 74820408 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010628.1 MGP_LPJ_G0008746.1 mouse_genomes_project 4 100223871 100223960 + Gm23366 miRNA miRNA MGP_LPJ_T0064620.1 MGP_LPJ_G0027992.1 mouse_genomes_project 4 11725170 11750796 - MGP_LPJ_P0064620 Otud6b protein_coding unknown_likely_coding MGP_LPJ_T0064446.1 MGP_LPJ_G0027957.1 mouse_genomes_project 4 1308199 1341003 - MGP_LPJ_P0064446 Impad1 protein_coding protein_coding MGP_LPJ_T0069223.1 MGP_LPJ_G0029058.1 mouse_genomes_project 4 154548299 154573791 - MGP_LPJ_P0069223 Slc45a1 protein_coding protein_coding MGP_LPJ_T0069224.1 MGP_LPJ_G0029058.1 mouse_genomes_project 4 154549765 154573714 - MGP_LPJ_P0069224 Slc45a1 protein_coding protein_coding MGP_LPJ_T0069225.1 MGP_LPJ_G0029058.1 mouse_genomes_project 4 154565234 154566035 - Slc45a1 protein_coding retained_intron MGP_LPJ_T0067192.1 MGP_LPJ_G0028575.1 mouse_genomes_project 4 119126286 119346543 - MGP_LPJ_P0067192 St3gal3 protein_coding protein_coding MGP_LPJ_T0067193.1 MGP_LPJ_G0028575.1 mouse_genomes_project 4 119126290 119346567 - MGP_LPJ_P0067193 St3gal3 protein_coding protein_coding MGP_LPJ_T0067194.1 MGP_LPJ_G0028575.1 mouse_genomes_project 4 119126292 119346535 - MGP_LPJ_P0067194 St3gal3 protein_coding protein_coding MGP_LPJ_T0067195.1 MGP_LPJ_G0028575.1 mouse_genomes_project 4 119135471 119235524 - MGP_LPJ_P0067195 St3gal3 protein_coding protein_coding MGP_LPJ_T0067196.1 MGP_LPJ_G0028575.1 mouse_genomes_project 4 119135563 119165748 - MGP_LPJ_P0067196 St3gal3 protein_coding protein_coding MGP_LPJ_T0068188.1 MGP_LPJ_G0028805.1 mouse_genomes_project 4 135737498 135792218 + MGP_LPJ_P0068188 Slc9a1 protein_coding protein_coding MGP_LPJ_T0068189.1 MGP_LPJ_G0028805.1 mouse_genomes_project 4 135737568 135792218 + MGP_LPJ_P0068189 Slc9a1 protein_coding unknown_likely_coding MGP_LPJ_T0068190.1 MGP_LPJ_G0028805.1 mouse_genomes_project 4 135738433 135780834 + Slc9a1 protein_coding processed_transcript MGP_LPJ_T0068191.1 MGP_LPJ_G0028805.1 mouse_genomes_project 4 135785009 135789072 + Slc9a1 protein_coding processed_transcript MGP_LPJ_T0068192.1 MGP_LPJ_G0028805.1 mouse_genomes_project 4 135788002 135788681 + Slc9a1 protein_coding processed_transcript MGP_LPJ_T0068193.1 MGP_LPJ_G0028805.1 mouse_genomes_project 4 135788487 135790837 + Slc9a1 protein_coding processed_transcript MGP_LPJ_T0064546.1 MGP_LPJ_G0027975.1 mouse_genomes_project 4 7928189 7985785 - MGP_LPJ_P0064546 Ints8 protein_coding protein_coding MGP_LPJ_T0064547.1 MGP_LPJ_G0027975.1 mouse_genomes_project 4 7933146 7941725 - Ints8 protein_coding processed_transcript MGP_LPJ_T0064548.1 MGP_LPJ_G0027975.1 mouse_genomes_project 4 7933417 7966917 - Ints8 protein_coding processed_transcript MGP_LPJ_T0064549.1 MGP_LPJ_G0027975.1 mouse_genomes_project 4 7933419 7985785 - MGP_LPJ_P0064549 Ints8 protein_coding protein_coding MGP_LPJ_T0064550.1 MGP_LPJ_G0027975.1 mouse_genomes_project 4 7933419 7985785 - MGP_LPJ_P0064550 Ints8 protein_coding protein_coding MGP_LPJ_T0064551.1 MGP_LPJ_G0027975.1 mouse_genomes_project 4 7933420 7942292 - Ints8 protein_coding processed_transcript MGP_LPJ_T0064552.1 MGP_LPJ_G0027975.1 mouse_genomes_project 4 7937790 7948442 - Ints8 protein_coding processed_transcript MGP_LPJ_T0064553.1 MGP_LPJ_G0027975.1 mouse_genomes_project 4 7963936 7967326 - Ints8 protein_coding processed_transcript MGP_LPJ_T0069021.1 MGP_LPJ_G0029019.1 mouse_genomes_project 4 151724239 151737512 - MGP_LPJ_P0069021 Agtrap protein_coding protein_coding MGP_LPJ_T0069022.1 MGP_LPJ_G0029019.1 mouse_genomes_project 4 151727766 151733730 - Agtrap protein_coding processed_transcript MGP_LPJ_T0069023.1 MGP_LPJ_G0029019.1 mouse_genomes_project 4 151731129 151737512 - Agtrap protein_coding retained_intron MGP_LPJ_T0067282.1 MGP_LPJ_G0028602.1 mouse_genomes_project 4 120484469 120490670 + MGP_LPJ_P0067282 Svbp protein_coding protein_coding MGP_LPJ_T0067283.1 MGP_LPJ_G0028602.1 mouse_genomes_project 4 120484570 120490670 + MGP_LPJ_P0067283 Svbp protein_coding protein_coding MGP_LPJ_T0067284.1 MGP_LPJ_G0028602.1 mouse_genomes_project 4 120484659 120490670 + MGP_LPJ_P0067284 Svbp protein_coding protein_coding MGP_LPJ_T0068126.1 MGP_LPJ_G0028791.1 mouse_genomes_project 4 135100799 135111633 + Rpa2 protein_coding processed_transcript MGP_LPJ_T0068127.1 MGP_LPJ_G0028791.1 mouse_genomes_project 4 135100802 135113670 + MGP_LPJ_P0068127 Rpa2 protein_coding protein_coding MGP_LPJ_T0068128.1 MGP_LPJ_G0028791.1 mouse_genomes_project 4 135100843 135109158 + Rpa2 protein_coding retained_intron MGP_LPJ_T0068129.1 MGP_LPJ_G0028791.1 mouse_genomes_project 4 135101102 135105101 + Rpa2 protein_coding retained_intron MGP_LPJ_T0068130.1 MGP_LPJ_G0028791.1 mouse_genomes_project 4 135103496 135105289 + Rpa2 protein_coding retained_intron MGP_LPJ_T0068131.1 MGP_LPJ_G0028791.1 mouse_genomes_project 4 135110050 135112079 + MGP_LPJ_P0068131 Rpa2 protein_coding protein_coding MGP_LPJ_T0098260.1 MGP_LPJ_G0036541.1 mouse_genomes_project 4 82365774 82365879 + n-R5s188 rRNA rRNA MGP_LPJ_T0065503.1 MGP_LPJ_G0028187.1 mouse_genomes_project 4 46662653 46750251 - MGP_LPJ_P0065503 Erp44 protein_coding protein_coding MGP_LPJ_T0065504.1 MGP_LPJ_G0028187.1 mouse_genomes_project 4 46663820 46666355 - Erp44 protein_coding processed_transcript MGP_LPJ_T0065505.1 MGP_LPJ_G0028187.1 mouse_genomes_project 4 46707383 46715397 - Erp44 protein_coding processed_transcript MGP_LPJ_T0065506.1 MGP_LPJ_G0028187.1 mouse_genomes_project 4 46710026 46750145 - Erp44 protein_coding processed_transcript MGP_LPJ_T0065495.1 MGP_LPJ_G0028185.1 mouse_genomes_project 4 46508708 46551204 + MGP_LPJ_P0065495 Nr4a3 protein_coding protein_coding MGP_LPJ_T0065496.1 MGP_LPJ_G0028185.1 mouse_genomes_project 4 46508786 46513722 + Nr4a3 protein_coding processed_transcript MGP_LPJ_T0065497.1 MGP_LPJ_G0028185.1 mouse_genomes_project 4 46512670 46551206 + MGP_LPJ_P0065497 Nr4a3 protein_coding protein_coding MGP_LPJ_T0065498.1 MGP_LPJ_G0028185.1 mouse_genomes_project 4 46514804 46520296 + Nr4a3 protein_coding processed_transcript MGP_LPJ_T0065270.1 MGP_LPJ_G0028136.1 mouse_genomes_project 4 41918770 41920222 + MGP_LPJ_P0065270 Hrct1 protein_coding protein_coding MGP_LPJ_T0069215.1 MGP_LPJ_G0029057.1 mouse_genomes_project 4 154165712 154541641 + MGP_LPJ_P0069215 Rere protein_coding protein_coding MGP_LPJ_T0069216.1 MGP_LPJ_G0029057.1 mouse_genomes_project 4 154165878 154166533 + Rere protein_coding processed_transcript MGP_LPJ_T0069217.1 MGP_LPJ_G0029057.1 mouse_genomes_project 4 154262159 154541644 + MGP_LPJ_P0069217 Rere protein_coding unknown_likely_coding MGP_LPJ_T0069218.1 MGP_LPJ_G0029057.1 mouse_genomes_project 4 154300360 154366157 + MGP_LPJ_P0069218 Rere protein_coding protein_coding MGP_LPJ_T0069219.1 MGP_LPJ_G0029057.1 mouse_genomes_project 4 154385118 154541637 + MGP_LPJ_P0069219 Rere protein_coding protein_coding MGP_LPJ_T0069220.1 MGP_LPJ_G0029057.1 mouse_genomes_project 4 154485341 154486254 + Rere protein_coding processed_transcript MGP_LPJ_T0069221.1 MGP_LPJ_G0029057.1 mouse_genomes_project 4 154485410 154531740 + Rere protein_coding processed_transcript MGP_LPJ_T0069222.1 MGP_LPJ_G0029057.1 mouse_genomes_project 4 154536940 154539503 + MGP_LPJ_P0069222 Rere protein_coding protein_coding MGP_LPJ_T0066777.1 MGP_LPJ_G0028489.1 mouse_genomes_project 4 111054366 111059997 + MGP_LPJ_P0066777 Dmrta2 protein_coding protein_coding MGP_LPJ_T0065762.1 MGP_LPJ_G0028262.1 mouse_genomes_project 4 61625859 61656974 + MGP_LPJ_P0065762 Slc31a1 protein_coding protein_coding MGP_LPJ_T0065763.1 MGP_LPJ_G0028262.1 mouse_genomes_project 4 61625914 61656974 + MGP_LPJ_P0065763 Slc31a1 protein_coding unknown_likely_coding MGP_LPJ_T0065764.1 MGP_LPJ_G0028262.1 mouse_genomes_project 4 61650416 61656974 + MGP_LPJ_P0065764 Slc31a1 protein_coding protein_coding MGP_LPJ_T0004599.1 MGP_LPJ_G0003994.1 mouse_genomes_project 4 145104463 145108303 + Fhad1os1 antisense antisense MGP_LPJ_T0014724.1 MGP_LPJ_G0012815.1 mouse_genomes_project 4 128983504 128983669 + processed_pseudogene processed_pseudogene MGP_LPJ_T0066330.1 MGP_LPJ_G0028402.1 mouse_genomes_project 4 101607521 101607920 - MGP_LPJ_P0066330 Gm10577 protein_coding protein_coding MGP_LPJ_T0100784.1 MGP_LPJ_G0039047.1 mouse_genomes_project 4 103447283 103447411 + Gm24869 snoRNA snoRNA MGP_LPJ_T0014455.1 MGP_LPJ_G0012546.1 mouse_genomes_project 4 32626705 32628085 + processed_pseudogene processed_pseudogene MGP_LPJ_T0068109.1 MGP_LPJ_G0028787.1 mouse_genomes_project 4 134887244 134908284 + MGP_LPJ_P0068109 Ptafr protein_coding protein_coding MGP_LPJ_T0065473.1 MGP_LPJ_G0028180.1 mouse_genomes_project 4 45507172 45538242 + MGP_LPJ_P0065473 Galnt12 protein_coding protein_coding MGP_LPJ_T0065474.1 MGP_LPJ_G0028180.1 mouse_genomes_project 4 45507236 45538222 + MGP_LPJ_P0065474 Galnt12 protein_coding protein_coding MGP_LPJ_T0099470.1 MGP_LPJ_G0037733.1 mouse_genomes_project 4 29528378 29528496 - Gm26254 snRNA snRNA MGP_LPJ_T0001440.1 MGP_LPJ_G0001359.1 mouse_genomes_project 4 42920862 42922430 + TEC TEC MGP_LPJ_T0014568.1 MGP_LPJ_G0012659.1 mouse_genomes_project 4 76404314 76406767 + processed_pseudogene processed_pseudogene MGP_LPJ_T0066303.1 MGP_LPJ_G0028395.1 mouse_genomes_project 4 100284177 100299644 + Alg6 protein_coding retained_intron MGP_LPJ_T0066304.1 MGP_LPJ_G0028395.1 mouse_genomes_project 4 100284178 100325533 + Alg6 protein_coding retained_intron MGP_LPJ_T0066305.1 MGP_LPJ_G0028395.1 mouse_genomes_project 4 100284178 100326682 + MGP_LPJ_P0066305 Alg6 protein_coding protein_coding MGP_LPJ_T0066306.1 MGP_LPJ_G0028395.1 mouse_genomes_project 4 100284189 100308853 + Alg6 protein_coding processed_transcript MGP_LPJ_T0066307.1 MGP_LPJ_G0028395.1 mouse_genomes_project 4 100284189 100316105 + MGP_LPJ_P0066307 Alg6 protein_coding protein_coding MGP_LPJ_T0066308.1 MGP_LPJ_G0028395.1 mouse_genomes_project 4 100284189 100316296 + MGP_LPJ_P0066308 Alg6 protein_coding protein_coding MGP_LPJ_T0066309.1 MGP_LPJ_G0028395.1 mouse_genomes_project 4 100288586 100302192 + Alg6 protein_coding retained_intron MGP_LPJ_T0004639.1 MGP_LPJ_G0004024.1 mouse_genomes_project 4 160000585 160002768 - 1500002C15Rik antisense antisense MGP_LPJ_T0004640.1 MGP_LPJ_G0004024.1 mouse_genomes_project 4 160000588 160002668 - 1500002C15Rik antisense antisense MGP_LPJ_T0099472.1 MGP_LPJ_G0037735.1 mouse_genomes_project 4 34530888 34530995 + Gm23314 snRNA snRNA MGP_LPJ_T0004446.1 MGP_LPJ_G0003876.1 mouse_genomes_project 4 8365898 8370504 - Gm11832 antisense antisense MGP_LPJ_T0007808.1 MGP_LPJ_G0006383.1 mouse_genomes_project 4 2110757 2116743 - Gm11782 lincRNA lincRNA MGP_LPJ_T0014580.1 MGP_LPJ_G0012671.1 mouse_genomes_project 4 82577959 82578226 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014424.1 MGP_LPJ_G0012515.1 mouse_genomes_project 4 24451108 24451356 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065340.1 MGP_LPJ_G0028149.1 mouse_genomes_project 4 43011048 43017141 + MGP_LPJ_P0065340 Zcchc7 protein_coding protein_coding MGP_LPJ_T0065341.1 MGP_LPJ_G0028149.1 mouse_genomes_project 4 43011739 43196066 + MGP_LPJ_P0065341 Zcchc7 protein_coding protein_coding MGP_LPJ_T0065342.1 MGP_LPJ_G0028149.1 mouse_genomes_project 4 43011759 43173018 + Zcchc7 protein_coding retained_intron MGP_LPJ_T0065343.1 MGP_LPJ_G0028149.1 mouse_genomes_project 4 43011810 43017398 + MGP_LPJ_P0065343 Zcchc7 protein_coding protein_coding MGP_LPJ_T0065344.1 MGP_LPJ_G0028149.1 mouse_genomes_project 4 43011818 43171832 + MGP_LPJ_P0065344 Zcchc7 protein_coding nonsense_mediated_decay MGP_LPJ_T0065345.1 MGP_LPJ_G0028149.1 mouse_genomes_project 4 43015614 43174080 + Zcchc7 protein_coding retained_intron MGP_LPJ_T0065346.1 MGP_LPJ_G0028149.1 mouse_genomes_project 4 43169217 43195225 + Zcchc7 protein_coding processed_transcript MGP_LPJ_T0065347.1 MGP_LPJ_G0028149.1 mouse_genomes_project 4 43185880 43196078 + MGP_LPJ_P0065347 Zcchc7 protein_coding protein_coding MGP_LPJ_T0065348.1 MGP_LPJ_G0028149.1 mouse_genomes_project 4 43188757 43195225 + MGP_LPJ_P0065348 Zcchc7 protein_coding nonsense_mediated_decay MGP_LPJ_T0066619.1 MGP_LPJ_G0028459.1 mouse_genomes_project 4 108806254 108827091 - MGP_LPJ_P0066619 Cpt2 protein_coding protein_coding MGP_LPJ_T0066620.1 MGP_LPJ_G0028459.1 mouse_genomes_project 4 108806256 108827041 - MGP_LPJ_P0066620 Cpt2 protein_coding protein_coding MGP_LPJ_T0066621.1 MGP_LPJ_G0028459.1 mouse_genomes_project 4 108809772 108827026 - MGP_LPJ_P0066621 Cpt2 protein_coding protein_coding MGP_LPJ_T0066622.1 MGP_LPJ_G0028459.1 mouse_genomes_project 4 108809859 108816247 - Cpt2 protein_coding retained_intron MGP_LPJ_T0066623.1 MGP_LPJ_G0028459.1 mouse_genomes_project 4 108810006 108826928 - Cpt2 protein_coding processed_transcript MGP_LPJ_T0066624.1 MGP_LPJ_G0028459.1 mouse_genomes_project 4 108810361 108827069 - MGP_LPJ_P0066624 Cpt2 protein_coding protein_coding MGP_LPJ_T0066461.1 MGP_LPJ_G0028433.1 mouse_genomes_project 4 107304615 107313372 - MGP_LPJ_P0066461 Bsnd protein_coding protein_coding MGP_LPJ_T0067717.1 MGP_LPJ_G0028715.1 mouse_genomes_project 4 130711090 130717514 - Zscan20 protein_coding processed_transcript MGP_LPJ_T0067718.1 MGP_LPJ_G0028715.1 mouse_genomes_project 4 130711098 130737657 - MGP_LPJ_P0067718 Zscan20 protein_coding protein_coding MGP_LPJ_T0067719.1 MGP_LPJ_G0028715.1 mouse_genomes_project 4 130712926 130737601 - MGP_LPJ_P0067719 Zscan20 protein_coding nonsense_mediated_decay MGP_LPJ_T0067720.1 MGP_LPJ_G0028715.1 mouse_genomes_project 4 130728974 130737593 - Zscan20 protein_coding retained_intron MGP_LPJ_T0067721.1 MGP_LPJ_G0028715.1 mouse_genomes_project 4 130732009 130737554 - MGP_LPJ_P0067721 Zscan20 protein_coding protein_coding MGP_LPJ_T0067722.1 MGP_LPJ_G0028715.1 mouse_genomes_project 4 130732043 130737540 - MGP_LPJ_P0067722 Zscan20 protein_coding protein_coding MGP_LPJ_T0010673.1 MGP_LPJ_G0008791.1 mouse_genomes_project 4 153310187 153310247 + Mir5616 miRNA miRNA MGP_LPJ_T0067649.1 MGP_LPJ_G0028696.1 mouse_genomes_project 4 128588448 128594670 + MGP_LPJ_P0067649 5730409E04Rik protein_coding protein_coding MGP_LPJ_T0067650.1 MGP_LPJ_G0028696.1 mouse_genomes_project 4 128588484 128594670 + MGP_LPJ_P0067650 5730409E04Rik protein_coding protein_coding MGP_LPJ_T0069733.1 MGP_LPJ_G0029150.1 mouse_genomes_project 4 160482207 160486004 - Agrn protein_coding retained_intron MGP_LPJ_T0069734.1 MGP_LPJ_G0029150.1 mouse_genomes_project 4 160482207 160502790 - MGP_LPJ_P0069734 Agrn protein_coding protein_coding MGP_LPJ_T0069735.1 MGP_LPJ_G0029150.1 mouse_genomes_project 4 160482207 160502790 - MGP_LPJ_P0069735 Agrn protein_coding protein_coding MGP_LPJ_T0069736.1 MGP_LPJ_G0029150.1 mouse_genomes_project 4 160482207 160502790 - MGP_LPJ_P0069736 Agrn protein_coding protein_coding MGP_LPJ_T0069737.1 MGP_LPJ_G0029150.1 mouse_genomes_project 4 160482211 160502996 - Agrn protein_coding retained_intron MGP_LPJ_T0069738.1 MGP_LPJ_G0029150.1 mouse_genomes_project 4 160482695 160514369 - MGP_LPJ_P0069738 Agrn protein_coding protein_coding MGP_LPJ_T0069739.1 MGP_LPJ_G0029150.1 mouse_genomes_project 4 160489223 160490657 - Agrn protein_coding processed_transcript MGP_LPJ_T0011594.1 MGP_LPJ_G0009712.1 mouse_genomes_project 4 117844209 117844300 + Gm27688 misc_RNA misc_RNA MGP_LPJ_T0068460.1 MGP_LPJ_G0028865.1 mouse_genomes_project 4 138557092 138561533 + MGP_LPJ_P0068460 Gale protein_coding protein_coding MGP_LPJ_T0068461.1 MGP_LPJ_G0028865.1 mouse_genomes_project 4 138557122 138558994 + MGP_LPJ_P0068461 Gale protein_coding protein_coding MGP_LPJ_T0068462.1 MGP_LPJ_G0028865.1 mouse_genomes_project 4 138557125 138560230 + Gale protein_coding retained_intron MGP_LPJ_T0068463.1 MGP_LPJ_G0028865.1 mouse_genomes_project 4 138557182 138558984 + MGP_LPJ_P0068463 Gale protein_coding protein_coding MGP_LPJ_T0068464.1 MGP_LPJ_G0028865.1 mouse_genomes_project 4 138558530 138561533 + MGP_LPJ_P0068464 Gale protein_coding protein_coding MGP_LPJ_T0068465.1 MGP_LPJ_G0028865.1 mouse_genomes_project 4 138558560 138560284 + Gale protein_coding retained_intron MGP_LPJ_T0068466.1 MGP_LPJ_G0028865.1 mouse_genomes_project 4 138558983 138561058 + Gale protein_coding retained_intron MGP_LPJ_T0068857.1 MGP_LPJ_G0028961.1 mouse_genomes_project 4 144674741 144701312 - MGP_LPJ_P0068857 Fblim1 protein_coding protein_coding MGP_LPJ_T0068858.1 MGP_LPJ_G0028961.1 mouse_genomes_project 4 144674741 144699619 - MGP_LPJ_P0068858 Fblim1 protein_coding protein_coding MGP_LPJ_T0068859.1 MGP_LPJ_G0028961.1 mouse_genomes_project 4 144674741 144707442 - MGP_LPJ_P0068859 Fblim1 protein_coding protein_coding MGP_LPJ_T0068860.1 MGP_LPJ_G0028961.1 mouse_genomes_project 4 144690700 144701223 - MGP_LPJ_P0068860 Fblim1 protein_coding protein_coding MGP_LPJ_T0068861.1 MGP_LPJ_G0028961.1 mouse_genomes_project 4 144690722 144707486 - MGP_LPJ_P0068861 Fblim1 protein_coding protein_coding MGP_LPJ_T0068862.1 MGP_LPJ_G0028961.1 mouse_genomes_project 4 144690722 144707427 - MGP_LPJ_P0068862 Fblim1 protein_coding protein_coding MGP_LPJ_T0068863.1 MGP_LPJ_G0028961.1 mouse_genomes_project 4 144690745 144699912 - MGP_LPJ_P0068863 Fblim1 protein_coding protein_coding MGP_LPJ_T0068864.1 MGP_LPJ_G0028961.1 mouse_genomes_project 4 144691389 144701420 - MGP_LPJ_P0068864 Fblim1 protein_coding protein_coding MGP_LPJ_T0068865.1 MGP_LPJ_G0028961.1 mouse_genomes_project 4 144691452 144697861 - Fblim1 protein_coding processed_transcript MGP_LPJ_T0068866.1 MGP_LPJ_G0028961.1 mouse_genomes_project 4 144691468 144701276 - MGP_LPJ_P0068866 Fblim1 protein_coding protein_coding MGP_LPJ_T0068867.1 MGP_LPJ_G0028961.1 mouse_genomes_project 4 144691469 144699619 - MGP_LPJ_P0068867 Fblim1 protein_coding protein_coding MGP_LPJ_T0068868.1 MGP_LPJ_G0028961.1 mouse_genomes_project 4 144691479 144699601 - MGP_LPJ_P0068868 Fblim1 protein_coding protein_coding MGP_LPJ_T0068869.1 MGP_LPJ_G0028961.1 mouse_genomes_project 4 144696639 144707415 - MGP_LPJ_P0068869 Fblim1 protein_coding protein_coding MGP_LPJ_T0068870.1 MGP_LPJ_G0028961.1 mouse_genomes_project 4 144696690 144707426 - MGP_LPJ_P0068870 Fblim1 protein_coding protein_coding MGP_LPJ_T0068871.1 MGP_LPJ_G0028961.1 mouse_genomes_project 4 144696757 144707417 - MGP_LPJ_P0068871 Fblim1 protein_coding protein_coding MGP_LPJ_T0098033.1 MGP_LPJ_G0036314.1 mouse_genomes_project 4 34730891 34731229 - pseudogene pseudogene MGP_LPJ_T0010617.1 MGP_LPJ_G0008735.1 mouse_genomes_project 4 62530463 62530545 + Mir455 miRNA miRNA MGP_LPJ_T0014649.1 MGP_LPJ_G0012740.1 mouse_genomes_project 4 106922544 106924212 - processed_pseudogene processed_pseudogene MGP_LPJ_T0069286.1 MGP_LPJ_G0029070.1 mouse_genomes_project 4 156020344 156029130 + MGP_LPJ_P0069286 Klhl21 protein_coding protein_coding MGP_LPJ_T0066365.1 MGP_LPJ_G0028412.1 mouse_genomes_project 4 102596152 102598675 + MGP_LPJ_P0066365 protein_coding protein_coding MGP_LPJ_T0066128.1 MGP_LPJ_G0028353.1 mouse_genomes_project 4 89362202 89411678 + MGP_LPJ_P0066128 Mtap protein_coding protein_coding MGP_LPJ_T0066129.1 MGP_LPJ_G0028353.1 mouse_genomes_project 4 89406959 89410070 + Mtap protein_coding processed_transcript MGP_LPJ_T0099507.1 MGP_LPJ_G0037770.1 mouse_genomes_project 4 109488481 109488584 + Gm23138 snRNA snRNA MGP_LPJ_T0067490.1 MGP_LPJ_G0028655.1 mouse_genomes_project 4 125499390 125513290 - MGP_LPJ_P0067490 Akirin1 protein_coding protein_coding MGP_LPJ_T0067491.1 MGP_LPJ_G0028655.1 mouse_genomes_project 4 125500753 125506467 - Akirin1 protein_coding processed_transcript MGP_LPJ_T0067492.1 MGP_LPJ_G0028655.1 mouse_genomes_project 4 125501880 125513176 - Akirin1 protein_coding processed_transcript MGP_LPJ_T0014564.1 MGP_LPJ_G0012655.1 mouse_genomes_project 4 75067641 75068356 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014431.1 MGP_LPJ_G0012522.1 mouse_genomes_project 4 25977856 25978615 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017979.1 MGP_LPJ_G0015450.1 mouse_genomes_project 4 13091210 13203499 + A530072M11Rik processed_transcript processed_transcript MGP_LPJ_T0067690.1 MGP_LPJ_G0028704.1 mouse_genomes_project 4 129093507 129147340 + MGP_LPJ_P0067690 Zmym6 protein_coding protein_coding MGP_LPJ_T0067691.1 MGP_LPJ_G0028704.1 mouse_genomes_project 4 129093552 129130177 + Zmym6 protein_coding processed_transcript MGP_LPJ_T0067692.1 MGP_LPJ_G0028704.1 mouse_genomes_project 4 129093684 129148487 + MGP_LPJ_P0067692 Zmym6 protein_coding unknown_likely_coding MGP_LPJ_T0067693.1 MGP_LPJ_G0028704.1 mouse_genomes_project 4 129094401 129105394 + Zmym6 protein_coding processed_transcript MGP_LPJ_T0067694.1 MGP_LPJ_G0028704.1 mouse_genomes_project 4 129103623 129105537 + Zmym6 protein_coding processed_transcript MGP_LPJ_T0067695.1 MGP_LPJ_G0028704.1 mouse_genomes_project 4 129126509 129130055 + Zmym6 protein_coding processed_transcript MGP_LPJ_T0065316.1 MGP_LPJ_G0028147.1 mouse_genomes_project 4 42543873 42603757 + MGP_LPJ_P0065316 Melk protein_coding protein_coding MGP_LPJ_T0065317.1 MGP_LPJ_G0028147.1 mouse_genomes_project 4 42545656 42570125 + MGP_LPJ_P0065317 Melk protein_coding protein_coding MGP_LPJ_T0065318.1 MGP_LPJ_G0028147.1 mouse_genomes_project 4 42546557 42568700 + Melk protein_coding processed_transcript MGP_LPJ_T0065319.1 MGP_LPJ_G0028147.1 mouse_genomes_project 4 42546557 42561050 + MGP_LPJ_P0065319 Melk protein_coding protein_coding MGP_LPJ_T0014621.1 MGP_LPJ_G0012712.1 mouse_genomes_project 4 98605066 98605522 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014352.1 MGP_LPJ_G0012443.1 mouse_genomes_project 4 3077644 3078088 - processed_pseudogene processed_pseudogene MGP_LPJ_T0068184.1 MGP_LPJ_G0028804.1 mouse_genomes_project 4 135660165 135707012 - MGP_LPJ_P0068184 Wdtc1 protein_coding protein_coding MGP_LPJ_T0068185.1 MGP_LPJ_G0028804.1 mouse_genomes_project 4 135676008 135722359 - Wdtc1 protein_coding processed_transcript MGP_LPJ_T0068186.1 MGP_LPJ_G0028804.1 mouse_genomes_project 4 135680503 135689915 - Wdtc1 protein_coding processed_transcript MGP_LPJ_T0068187.1 MGP_LPJ_G0028804.1 mouse_genomes_project 4 135681128 135722937 - Wdtc1 protein_coding processed_transcript MGP_LPJ_T0014471.1 MGP_LPJ_G0012562.1 mouse_genomes_project 4 37987349 37989237 + processed_pseudogene processed_pseudogene MGP_LPJ_T0069605.1 MGP_LPJ_G0029124.1 mouse_genomes_project 4 159921135 159924438 - Mib2 protein_coding processed_transcript MGP_LPJ_T0069606.1 MGP_LPJ_G0029124.1 mouse_genomes_project 4 159921140 159933568 - Mib2 protein_coding processed_transcript MGP_LPJ_T0069607.1 MGP_LPJ_G0029124.1 mouse_genomes_project 4 159921140 159936026 - MGP_LPJ_P0069607 Mib2 protein_coding protein_coding MGP_LPJ_T0069608.1 MGP_LPJ_G0029124.1 mouse_genomes_project 4 159921141 159923186 - Mib2 protein_coding processed_transcript MGP_LPJ_T0069609.1 MGP_LPJ_G0029124.1 mouse_genomes_project 4 159922296 159923186 - Mib2 protein_coding processed_transcript MGP_LPJ_T0069610.1 MGP_LPJ_G0029124.1 mouse_genomes_project 4 159923401 159926042 - MGP_LPJ_P0069610 Mib2 protein_coding protein_coding MGP_LPJ_T0069611.1 MGP_LPJ_G0029124.1 mouse_genomes_project 4 159924082 159924798 - Mib2 protein_coding processed_transcript MGP_LPJ_T0069612.1 MGP_LPJ_G0029124.1 mouse_genomes_project 4 159927778 159936025 - Mib2 protein_coding processed_transcript MGP_LPJ_T0069613.1 MGP_LPJ_G0029124.1 mouse_genomes_project 4 159933505 159936021 - Mib2 protein_coding processed_transcript MGP_LPJ_T0065971.1 MGP_LPJ_G0028314.1 mouse_genomes_project 4 82803815 82807209 - MGP_LPJ_P0065971 Cer1 protein_coding protein_coding MGP_LPJ_T0068163.1 MGP_LPJ_G0028799.1 mouse_genomes_project 4 135572205 135574723 - MGP_LPJ_P0068163 Gpr3 protein_coding protein_coding MGP_LPJ_T0068164.1 MGP_LPJ_G0028799.1 mouse_genomes_project 4 135573232 135575401 - MGP_LPJ_P0068164 Gpr3 protein_coding protein_coding MGP_LPJ_T0068165.1 MGP_LPJ_G0028799.1 mouse_genomes_project 4 135573935 135575179 - MGP_LPJ_P0068165 Gpr3 protein_coding protein_coding MGP_LPJ_T0100796.1 MGP_LPJ_G0039059.1 mouse_genomes_project 4 122923475 122923607 + Gm26162 snoRNA snoRNA MGP_LPJ_T0069181.1 MGP_LPJ_G0029050.1 mouse_genomes_project 4 153724812 153784568 - MGP_LPJ_P0069181 Spsb1 protein_coding protein_coding MGP_LPJ_T0069182.1 MGP_LPJ_G0029050.1 mouse_genomes_project 4 153726483 153738375 - MGP_LPJ_P0069182 Spsb1 protein_coding protein_coding MGP_LPJ_T0069183.1 MGP_LPJ_G0029050.1 mouse_genomes_project 4 153726729 153735849 - MGP_LPJ_P0069183 Spsb1 protein_coding protein_coding MGP_LPJ_T0069184.1 MGP_LPJ_G0029050.1 mouse_genomes_project 4 153735066 153783329 - MGP_LPJ_P0069184 Spsb1 protein_coding protein_coding MGP_LPJ_T0069185.1 MGP_LPJ_G0029050.1 mouse_genomes_project 4 153735550 153750945 - MGP_LPJ_P0069185 Spsb1 protein_coding protein_coding MGP_LPJ_T0069186.1 MGP_LPJ_G0029050.1 mouse_genomes_project 4 153735554 153760017 - MGP_LPJ_P0069186 Spsb1 protein_coding protein_coding MGP_LPJ_T0069187.1 MGP_LPJ_G0029050.1 mouse_genomes_project 4 153735559 153772136 - MGP_LPJ_P0069187 Spsb1 protein_coding protein_coding MGP_LPJ_T0069188.1 MGP_LPJ_G0029050.1 mouse_genomes_project 4 153735608 153775634 - MGP_LPJ_P0069188 Spsb1 protein_coding protein_coding MGP_LPJ_T0069189.1 MGP_LPJ_G0029050.1 mouse_genomes_project 4 153735701 153784568 - Spsb1 protein_coding processed_transcript MGP_LPJ_T0069190.1 MGP_LPJ_G0029050.1 mouse_genomes_project 4 153738123 153784556 - Spsb1 protein_coding processed_transcript MGP_LPJ_T0010642.1 MGP_LPJ_G0008760.1 mouse_genomes_project 4 126594882 126594991 + Mir698 miRNA miRNA MGP_LPJ_T0004600.1 MGP_LPJ_G0003995.1 mouse_genomes_project 4 145142122 145154267 + 4930455G09Rik antisense antisense MGP_LPJ_T0065268.1 MGP_LPJ_G0028135.1 mouse_genomes_project 4 41894197 41898801 - MGP_LPJ_P0065268 Olfr71 protein_coding protein_coding MGP_LPJ_T0065269.1 MGP_LPJ_G0028135.1 mouse_genomes_project 4 41894197 41895136 - MGP_LPJ_P0065269 Olfr71 protein_coding protein_coding MGP_LPJ_T0017997.1 MGP_LPJ_G0015463.1 mouse_genomes_project 4 51929724 51942073 - 4930412L05Rik processed_transcript processed_transcript MGP_LPJ_T0017998.1 MGP_LPJ_G0015463.1 mouse_genomes_project 4 51939145 51942369 - 4930412L05Rik processed_transcript processed_transcript MGP_LPJ_T0011590.1 MGP_LPJ_G0009708.1 mouse_genomes_project 4 102172029 102172303 + Gm22533 misc_RNA misc_RNA MGP_LPJ_T0068065.1 MGP_LPJ_G0028780.1 mouse_genomes_project 4 134610339 134629250 - MGP_LPJ_P0068065 Trnau1ap protein_coding protein_coding MGP_LPJ_T0068066.1 MGP_LPJ_G0028780.1 mouse_genomes_project 4 134610339 134629299 - MGP_LPJ_P0068066 Trnau1ap protein_coding protein_coding MGP_LPJ_T0068067.1 MGP_LPJ_G0028780.1 mouse_genomes_project 4 134610341 134629277 - Trnau1ap protein_coding retained_intron MGP_LPJ_T0068068.1 MGP_LPJ_G0028780.1 mouse_genomes_project 4 134610425 134629255 - Trnau1ap protein_coding processed_transcript MGP_LPJ_T0068069.1 MGP_LPJ_G0028780.1 mouse_genomes_project 4 134610441 134629150 - MGP_LPJ_P0068069 Trnau1ap protein_coding nonsense_mediated_decay MGP_LPJ_T0068070.1 MGP_LPJ_G0028780.1 mouse_genomes_project 4 134612779 134629175 - MGP_LPJ_P0068070 Trnau1ap protein_coding protein_coding MGP_LPJ_T0068071.1 MGP_LPJ_G0028780.1 mouse_genomes_project 4 134612885 134629265 - MGP_LPJ_P0068071 Trnau1ap protein_coding nonsense_mediated_decay MGP_LPJ_T0068072.1 MGP_LPJ_G0028780.1 mouse_genomes_project 4 134612922 134629243 - Trnau1ap protein_coding processed_transcript MGP_LPJ_T0068073.1 MGP_LPJ_G0028780.1 mouse_genomes_project 4 134612925 134629299 - MGP_LPJ_P0068073 Trnau1ap protein_coding nonsense_mediated_decay MGP_LPJ_T0068074.1 MGP_LPJ_G0028780.1 mouse_genomes_project 4 134620955 134625032 - Trnau1ap protein_coding retained_intron MGP_LPJ_T0068075.1 MGP_LPJ_G0028780.1 mouse_genomes_project 4 134621433 134629299 - MGP_LPJ_P0068075 Trnau1ap protein_coding protein_coding MGP_LPJ_T0068076.1 MGP_LPJ_G0028780.1 mouse_genomes_project 4 134627869 134629276 - Trnau1ap protein_coding retained_intron MGP_LPJ_T0014711.1 MGP_LPJ_G0012802.1 mouse_genomes_project 4 124981485 124982058 - processed_pseudogene processed_pseudogene MGP_LPJ_T0064768.1 MGP_LPJ_G0028033.1 mouse_genomes_project 4 30154869 30156986 - MGP_LPJ_P0064768 Gja10 protein_coding protein_coding MGP_LPJ_T0067723.1 MGP_LPJ_G0028716.1 mouse_genomes_project 4 130744474 130747651 - MGP_LPJ_P0067723 Tlr12 protein_coding protein_coding MGP_LPJ_T0067724.1 MGP_LPJ_G0028716.1 mouse_genomes_project 4 130746533 130747624 - Tlr12 protein_coding processed_transcript MGP_LPJ_T0008027.1 MGP_LPJ_G0006550.1 mouse_genomes_project 4 143411968 143437430 + Gm13026 lincRNA lincRNA MGP_LPJ_T0099516.1 MGP_LPJ_G0037779.1 mouse_genomes_project 4 118344377 118344493 + Gm23143 snRNA snRNA MGP_LPJ_T0014740.1 MGP_LPJ_G0012831.1 mouse_genomes_project 4 136627192 136627513 - processed_pseudogene processed_pseudogene MGP_LPJ_T0068913.1 MGP_LPJ_G0028975.1 mouse_genomes_project 4 145245822 145365497 - MGP_LPJ_P0068913 protein_coding protein_coding MGP_LPJ_T0068914.1 MGP_LPJ_G0028975.1 mouse_genomes_project 4 145258241 145267901 - protein_coding processed_transcript MGP_LPJ_T0068915.1 MGP_LPJ_G0028975.1 mouse_genomes_project 4 145268022 145312105 - MGP_LPJ_P0068915 protein_coding protein_coding MGP_LPJ_T0068916.1 MGP_LPJ_G0028975.1 mouse_genomes_project 4 145291464 145395602 - MGP_LPJ_P0068916 protein_coding protein_coding MGP_LPJ_T0068917.1 MGP_LPJ_G0028975.1 mouse_genomes_project 4 145291471 145365399 - MGP_LPJ_P0068917 protein_coding protein_coding MGP_LPJ_T0068918.1 MGP_LPJ_G0028975.1 mouse_genomes_project 4 145291472 145299532 - protein_coding retained_intron MGP_LPJ_T0068919.1 MGP_LPJ_G0028975.1 mouse_genomes_project 4 145293769 145365497 - MGP_LPJ_P0068919 protein_coding protein_coding MGP_LPJ_T0068920.1 MGP_LPJ_G0028975.1 mouse_genomes_project 4 145299836 145307633 - protein_coding retained_intron MGP_LPJ_T0018057.1 MGP_LPJ_G0015498.1 mouse_genomes_project 4 156395354 156396780 - Gm13645 processed_transcript processed_transcript MGP_LPJ_T0065685.1 MGP_LPJ_G0028240.1 mouse_genomes_project 4 57368968 57438372 - MGP_LPJ_P0065685 Lpar1 protein_coding protein_coding MGP_LPJ_T0065686.1 MGP_LPJ_G0028240.1 mouse_genomes_project 4 57368968 57496876 - MGP_LPJ_P0065686 Lpar1 protein_coding protein_coding MGP_LPJ_T0065687.1 MGP_LPJ_G0028240.1 mouse_genomes_project 4 57368968 57497072 - MGP_LPJ_P0065687 Lpar1 protein_coding protein_coding MGP_LPJ_T0065688.1 MGP_LPJ_G0028240.1 mouse_genomes_project 4 57368968 57496030 - MGP_LPJ_P0065688 Lpar1 protein_coding protein_coding MGP_LPJ_T0065689.1 MGP_LPJ_G0028240.1 mouse_genomes_project 4 57368968 57497147 - MGP_LPJ_P0065689 Lpar1 protein_coding protein_coding MGP_LPJ_T0065690.1 MGP_LPJ_G0028240.1 mouse_genomes_project 4 57426098 57491132 - MGP_LPJ_P0065690 Lpar1 protein_coding protein_coding MGP_LPJ_T0065691.1 MGP_LPJ_G0028240.1 mouse_genomes_project 4 57426153 57497417 - MGP_LPJ_P0065691 Lpar1 protein_coding protein_coding MGP_LPJ_T0065692.1 MGP_LPJ_G0028240.1 mouse_genomes_project 4 57426187 57495903 - MGP_LPJ_P0065692 Lpar1 protein_coding protein_coding MGP_LPJ_T0067155.1 MGP_LPJ_G0028570.1 mouse_genomes_project 4 119060609 119074543 - MGP_LPJ_P0067155 B4galt2 protein_coding nonsense_mediated_decay MGP_LPJ_T0067162.1 MGP_LPJ_G0028570.1 mouse_genomes_project 4 119064402 119074864 - MGP_LPJ_P0067162 B4galt2 protein_coding nonsense_mediated_decay MGP_LPJ_T0067163.1 MGP_LPJ_G0028570.1 mouse_genomes_project 4 119064512 119074875 - MGP_LPJ_P0067163 B4galt2 protein_coding protein_coding MGP_LPJ_T0067164.1 MGP_LPJ_G0028570.1 mouse_genomes_project 4 119064683 119074500 - MGP_LPJ_P0067164 B4galt2 protein_coding protein_coding MGP_LPJ_T0067166.1 MGP_LPJ_G0028570.1 mouse_genomes_project 4 119068961 119074543 - MGP_LPJ_P0067166 B4galt2 protein_coding protein_coding MGP_LPJ_T0067167.1 MGP_LPJ_G0028570.1 mouse_genomes_project 4 119072406 119074607 - B4galt2 protein_coding processed_transcript MGP_LPJ_T0067168.1 MGP_LPJ_G0028570.1 mouse_genomes_project 4 119072780 119073679 - MGP_LPJ_P0067168 B4galt2 protein_coding protein_coding MGP_LPJ_T0008043.1 MGP_LPJ_G0006566.1 mouse_genomes_project 4 156775569 156778545 + Gm833 lincRNA lincRNA MGP_LPJ_T0014534.1 MGP_LPJ_G0012625.1 mouse_genomes_project 4 62205002 62205257 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008034.1 MGP_LPJ_G0006557.1 mouse_genomes_project 4 151978377 151987958 + Gm13206 lincRNA lincRNA MGP_LPJ_T0008042.1 MGP_LPJ_G0006565.1 mouse_genomes_project 4 154771480 154785389 + Gm13049 lincRNA lincRNA MGP_LPJ_T0014696.1 MGP_LPJ_G0012787.1 mouse_genomes_project 4 120834103 120834517 - processed_pseudogene processed_pseudogene MGP_LPJ_T0067211.1 MGP_LPJ_G0028578.1 mouse_genomes_project 4 119594549 119645365 - MGP_LPJ_P0067211 Szt2 protein_coding protein_coding MGP_LPJ_T0067212.1 MGP_LPJ_G0028578.1 mouse_genomes_project 4 119594553 119608616 - MGP_LPJ_P0067212 Szt2 protein_coding nonsense_mediated_decay MGP_LPJ_T0067213.1 MGP_LPJ_G0028578.1 mouse_genomes_project 4 119595215 119596870 - Szt2 protein_coding processed_transcript MGP_LPJ_T0067214.1 MGP_LPJ_G0028578.1 mouse_genomes_project 4 119603296 119604183 - Szt2 protein_coding retained_intron MGP_LPJ_T0067215.1 MGP_LPJ_G0028578.1 mouse_genomes_project 4 119607014 119608167 - Szt2 protein_coding retained_intron MGP_LPJ_T0067216.1 MGP_LPJ_G0028578.1 mouse_genomes_project 4 119626059 119626863 - Szt2 protein_coding processed_transcript MGP_LPJ_T0014703.1 MGP_LPJ_G0012794.1 mouse_genomes_project 4 122565387 122566380 + processed_pseudogene processed_pseudogene MGP_LPJ_T0065645.1 MGP_LPJ_G0028230.1 mouse_genomes_project 4 55871629 56032930 - MGP_LPJ_P0065645 protein_coding protein_coding MGP_LPJ_T0065646.1 MGP_LPJ_G0028230.1 mouse_genomes_project 4 55875331 55909221 - MGP_LPJ_P0065646 protein_coding protein_coding MGP_LPJ_T0065647.1 MGP_LPJ_G0028230.1 mouse_genomes_project 4 55945783 56032930 - MGP_LPJ_P0065647 protein_coding protein_coding MGP_LPJ_T0065648.1 MGP_LPJ_G0028230.1 mouse_genomes_project 4 55947089 55954618 - protein_coding processed_transcript MGP_LPJ_T0065649.1 MGP_LPJ_G0028230.1 mouse_genomes_project 4 55957363 55987444 - protein_coding processed_transcript MGP_LPJ_T0065650.1 MGP_LPJ_G0028230.1 mouse_genomes_project 4 55962881 56026095 - protein_coding processed_transcript MGP_LPJ_T0065651.1 MGP_LPJ_G0028230.1 mouse_genomes_project 4 55972012 56005496 - protein_coding processed_transcript MGP_LPJ_T0014537.1 MGP_LPJ_G0012628.1 mouse_genomes_project 4 64190793 64192007 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014423.1 MGP_LPJ_G0012514.1 mouse_genomes_project 4 23849393 23850071 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004631.1 MGP_LPJ_G0004018.1 mouse_genomes_project 4 158749083 158756451 + Gm13133 antisense antisense MGP_LPJ_T0014751.1 MGP_LPJ_G0012842.1 mouse_genomes_project 4 138677308 138677766 - processed_pseudogene processed_pseudogene MGP_LPJ_T0068348.1 MGP_LPJ_G0028839.1 mouse_genomes_project 4 136984449 136997330 + MGP_LPJ_P0068348 Aunip protein_coding protein_coding MGP_LPJ_T0064947.1 MGP_LPJ_G0028077.1 mouse_genomes_project 4 39108885 39118943 - MGP_LPJ_P0064947 Nol6 protein_coding protein_coding MGP_LPJ_T0064948.1 MGP_LPJ_G0028077.1 mouse_genomes_project 4 39115789 39117758 - Nol6 protein_coding processed_transcript MGP_LPJ_T0064949.1 MGP_LPJ_G0028077.1 mouse_genomes_project 4 39116005 39117993 - Nol6 protein_coding processed_transcript MGP_LPJ_T0064950.1 MGP_LPJ_G0028077.1 mouse_genomes_project 4 39116337 39117213 - Nol6 protein_coding processed_transcript MGP_LPJ_T0067260.1 MGP_LPJ_G0028595.1 mouse_genomes_project 4 120176246 120178207 - MGP_LPJ_P0067260 Olfr1329 protein_coding protein_coding MGP_LPJ_T0014518.1 MGP_LPJ_G0012609.1 mouse_genomes_project 4 54049393 54049853 + processed_pseudogene processed_pseudogene MGP_LPJ_T0067310.1 MGP_LPJ_G0028608.1 mouse_genomes_project 4 120605303 120627776 - MGP_LPJ_P0067310 Ppih protein_coding protein_coding MGP_LPJ_T0067311.1 MGP_LPJ_G0028608.1 mouse_genomes_project 4 120605303 120627763 - MGP_LPJ_P0067311 Ppih protein_coding protein_coding MGP_LPJ_T0067312.1 MGP_LPJ_G0028608.1 mouse_genomes_project 4 120605303 120627825 - MGP_LPJ_P0067312 Ppih protein_coding protein_coding MGP_LPJ_T0067313.1 MGP_LPJ_G0028608.1 mouse_genomes_project 4 120611874 120627696 - MGP_LPJ_P0067313 Ppih protein_coding protein_coding MGP_LPJ_T0067314.1 MGP_LPJ_G0028608.1 mouse_genomes_project 4 120612449 120627763 - MGP_LPJ_P0067314 Ppih protein_coding protein_coding MGP_LPJ_T0067315.1 MGP_LPJ_G0028608.1 mouse_genomes_project 4 120617838 120627778 - MGP_LPJ_P0067315 Ppih protein_coding protein_coding MGP_LPJ_T0069025.1 MGP_LPJ_G0029021.1 mouse_genomes_project 4 151782922 151794925 + Mad2l2 protein_coding processed_transcript MGP_LPJ_T0069026.1 MGP_LPJ_G0029021.1 mouse_genomes_project 4 151794315 151801671 + MGP_LPJ_P0069026 Mad2l2 protein_coding protein_coding MGP_LPJ_T0069027.1 MGP_LPJ_G0029021.1 mouse_genomes_project 4 151794857 151801670 + MGP_LPJ_P0069027 Mad2l2 protein_coding protein_coding MGP_LPJ_T0069028.1 MGP_LPJ_G0029021.1 mouse_genomes_project 4 151794895 151800004 + Mad2l2 protein_coding retained_intron MGP_LPJ_T0069029.1 MGP_LPJ_G0029021.1 mouse_genomes_project 4 151794928 151802234 + MGP_LPJ_P0069029 Mad2l2 protein_coding protein_coding MGP_LPJ_T0069030.1 MGP_LPJ_G0029021.1 mouse_genomes_project 4 151801339 151802001 + Mad2l2 protein_coding retained_intron MGP_LPJ_T0100736.1 MGP_LPJ_G0038999.1 mouse_genomes_project 4 10959176 10959692 - Gm24068 snoRNA snoRNA MGP_LPJ_T0014654.1 MGP_LPJ_G0012745.1 mouse_genomes_project 4 108579286 108579837 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014592.1 MGP_LPJ_G0012683.1 mouse_genomes_project 4 86938341 86940150 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018022.1 MGP_LPJ_G0015481.1 mouse_genomes_project 4 109584686 109613326 - Gm12743 processed_transcript processed_transcript MGP_LPJ_T0014472.1 MGP_LPJ_G0012563.1 mouse_genomes_project 4 38030913 38031331 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004597.1 MGP_LPJ_G0003992.1 mouse_genomes_project 4 144954723 144957397 + Ctrcos antisense antisense MGP_LPJ_T0014788.1 MGP_LPJ_G0012879.1 mouse_genomes_project 4 158383962 158384434 + processed_pseudogene processed_pseudogene MGP_LPJ_T0067273.1 MGP_LPJ_G0028601.1 mouse_genomes_project 4 120464642 120479183 - MGP_LPJ_P0067273 protein_coding protein_coding MGP_LPJ_T0067274.1 MGP_LPJ_G0028601.1 mouse_genomes_project 4 120464776 120479148 - MGP_LPJ_P0067274 protein_coding nonsense_mediated_decay MGP_LPJ_T0067275.1 MGP_LPJ_G0028601.1 mouse_genomes_project 4 120466757 120479148 - protein_coding retained_intron MGP_LPJ_T0067276.1 MGP_LPJ_G0028601.1 mouse_genomes_project 4 120467765 120479128 - protein_coding processed_transcript MGP_LPJ_T0067277.1 MGP_LPJ_G0028601.1 mouse_genomes_project 4 120474899 120477919 - MGP_LPJ_P0067277 protein_coding protein_coding MGP_LPJ_T0067278.1 MGP_LPJ_G0028601.1 mouse_genomes_project 4 120474960 120479123 - MGP_LPJ_P0067278 protein_coding protein_coding MGP_LPJ_T0067279.1 MGP_LPJ_G0028601.1 mouse_genomes_project 4 120476366 120479168 - MGP_LPJ_P0067279 protein_coding nonsense_mediated_decay MGP_LPJ_T0067280.1 MGP_LPJ_G0028601.1 mouse_genomes_project 4 120476499 120479165 - MGP_LPJ_P0067280 protein_coding nonsense_mediated_decay MGP_LPJ_T0067281.1 MGP_LPJ_G0028601.1 mouse_genomes_project 4 120476507 120479183 - MGP_LPJ_P0067281 protein_coding protein_coding MGP_LPJ_T0014543.1 MGP_LPJ_G0012634.1 mouse_genomes_project 4 67745380 67747425 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065941.1 MGP_LPJ_G0028310.1 mouse_genomes_project 4 80794008 80840095 + MGP_LPJ_P0065941 Lurap1l protein_coding protein_coding MGP_LPJ_T0066854.1 MGP_LPJ_G0028506.1 mouse_genomes_project 4 115921767 115955272 - MGP_LPJ_P0066854 Cmpk1 protein_coding protein_coding MGP_LPJ_T0066855.1 MGP_LPJ_G0028506.1 mouse_genomes_project 4 115925334 115955180 - MGP_LPJ_P0066855 Cmpk1 protein_coding nonsense_mediated_decay MGP_LPJ_T0066856.1 MGP_LPJ_G0028506.1 mouse_genomes_project 4 115933065 115955103 - MGP_LPJ_P0066856 Cmpk1 protein_coding nonsense_mediated_decay MGP_LPJ_T0066857.1 MGP_LPJ_G0028506.1 mouse_genomes_project 4 115952848 115955180 - Cmpk1 protein_coding processed_transcript MGP_LPJ_T0014517.1 MGP_LPJ_G0012608.1 mouse_genomes_project 4 53954878 53955487 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007992.1 MGP_LPJ_G0006526.1 mouse_genomes_project 4 133900131 133925416 - Gm12962 lincRNA lincRNA MGP_LPJ_T0007993.1 MGP_LPJ_G0006526.1 mouse_genomes_project 4 133900459 133931211 - Gm12962 lincRNA lincRNA MGP_LPJ_T0008018.1 MGP_LPJ_G0006542.1 mouse_genomes_project 4 141018557 141019033 + 2310026L22Rik lincRNA lincRNA MGP_LPJ_T0010639.1 MGP_LPJ_G0008757.1 mouse_genomes_project 4 122395359 122395423 - Mir7015 miRNA miRNA MGP_LPJ_T0099461.1 MGP_LPJ_G0037724.1 mouse_genomes_project 4 5849872 5849978 + Gm23423 snRNA snRNA MGP_LPJ_T0066993.1 MGP_LPJ_G0028538.1 mouse_genomes_project 4 117616233 117650564 + MGP_LPJ_P0066993 Ipp protein_coding protein_coding MGP_LPJ_T0066994.1 MGP_LPJ_G0028538.1 mouse_genomes_project 4 117616236 117650572 + MGP_LPJ_P0066994 Ipp protein_coding protein_coding MGP_LPJ_T0066315.1 MGP_LPJ_G0028397.1 mouse_genomes_project 4 100399916 100402279 + MGP_LPJ_P0066315 Efcab7 protein_coding protein_coding MGP_LPJ_T0066316.1 MGP_LPJ_G0028397.1 mouse_genomes_project 4 100400158 100402279 + MGP_LPJ_P0066316 Efcab7 protein_coding protein_coding MGP_LPJ_T0066317.1 MGP_LPJ_G0028397.1 mouse_genomes_project 4 100400218 100402279 + MGP_LPJ_P0066317 Efcab7 protein_coding protein_coding MGP_LPJ_T0066318.1 MGP_LPJ_G0028397.1 mouse_genomes_project 4 100400230 100463452 + MGP_LPJ_P0066318 Efcab7 protein_coding unknown_likely_coding MGP_LPJ_T0066319.1 MGP_LPJ_G0028397.1 mouse_genomes_project 4 100402092 100463452 + MGP_LPJ_P0066319 Efcab7 protein_coding protein_coding MGP_LPJ_T0066320.1 MGP_LPJ_G0028397.1 mouse_genomes_project 4 100459703 100463630 + MGP_LPJ_P0066320 Efcab7 protein_coding protein_coding MGP_LPJ_T0014656.1 MGP_LPJ_G0012747.1 mouse_genomes_project 4 109264560 109265356 - processed_pseudogene processed_pseudogene MGP_LPJ_T0065043.1 MGP_LPJ_G0028099.1 mouse_genomes_project 4 39829943 39830691 - MGP_LPJ_P0065043 Ccl27a protein_coding protein_coding MGP_LPJ_T0072547.1 MGP_LPJ_G0029671.1 mouse_genomes_project 5 99389166 99391046 - MGP_LPJ_P0072547 Gk2 protein_coding protein_coding MGP_LPJ_T0070204.1 MGP_LPJ_G0029234.1 mouse_genomes_project 5 22214135 22277273 + MGP_LPJ_P0070204 Klhl7 protein_coding nonsense_mediated_decay MGP_LPJ_T0070205.1 MGP_LPJ_G0029234.1 mouse_genomes_project 5 22214177 22251592 + Klhl7 protein_coding retained_intron MGP_LPJ_T0070206.1 MGP_LPJ_G0029234.1 mouse_genomes_project 5 22214284 22279851 + MGP_LPJ_P0070206 Klhl7 protein_coding protein_coding MGP_LPJ_T0072311.1 MGP_LPJ_G0029618.1 mouse_genomes_project 5 91094191 91317878 - MGP_LPJ_P0072311 Adamts3 protein_coding protein_coding MGP_LPJ_T0072312.1 MGP_LPJ_G0029618.1 mouse_genomes_project 5 91094191 91317878 - MGP_LPJ_P0072312 Adamts3 protein_coding protein_coding MGP_LPJ_T0072313.1 MGP_LPJ_G0029618.1 mouse_genomes_project 5 91264646 91318277 - MGP_LPJ_P0072313 Adamts3 protein_coding protein_coding MGP_LPJ_T0072314.1 MGP_LPJ_G0029618.1 mouse_genomes_project 5 91294239 91317090 - Adamts3 protein_coding processed_transcript MGP_LPJ_T0071637.1 MGP_LPJ_G0029481.1 mouse_genomes_project 5 65693257 65758079 + MGP_LPJ_P0071637 Ube2k protein_coding protein_coding MGP_LPJ_T0071638.1 MGP_LPJ_G0029481.1 mouse_genomes_project 5 65693280 65757273 + MGP_LPJ_P0071638 Ube2k protein_coding protein_coding MGP_LPJ_T0071639.1 MGP_LPJ_G0029481.1 mouse_genomes_project 5 65693287 65758079 + MGP_LPJ_P0071639 Ube2k protein_coding protein_coding MGP_LPJ_T0071640.1 MGP_LPJ_G0029481.1 mouse_genomes_project 5 65693330 65757469 + MGP_LPJ_P0071640 Ube2k protein_coding nonsense_mediated_decay MGP_LPJ_T0071641.1 MGP_LPJ_G0029481.1 mouse_genomes_project 5 65693480 65758352 + MGP_LPJ_P0071641 Ube2k protein_coding protein_coding MGP_LPJ_T0071642.1 MGP_LPJ_G0029481.1 mouse_genomes_project 5 65729433 65732110 + Ube2k protein_coding retained_intron MGP_LPJ_T0071643.1 MGP_LPJ_G0029481.1 mouse_genomes_project 5 65753919 65757469 + Ube2k protein_coding retained_intron MGP_LPJ_T0015021.1 MGP_LPJ_G0013112.1 mouse_genomes_project 5 92220099 92220413 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015031.1 MGP_LPJ_G0013122.1 mouse_genomes_project 5 100105416 100106412 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015117.1 MGP_LPJ_G0013208.1 mouse_genomes_project 5 142027147 142027543 + processed_pseudogene processed_pseudogene MGP_LPJ_T0072364.1 MGP_LPJ_G0029632.1 mouse_genomes_project 5 92363336 92365205 + MGP_LPJ_P0072364 Cxcl1 protein_coding protein_coding MGP_LPJ_T0072365.1 MGP_LPJ_G0029632.1 mouse_genomes_project 5 92363338 92365203 + Cxcl1 protein_coding retained_intron MGP_LPJ_T0074485.1 MGP_LPJ_G0030045.1 mouse_genomes_project 5 134797868 134852432 + MGP_LPJ_P0074485 Rabgef1 protein_coding protein_coding MGP_LPJ_T0074486.1 MGP_LPJ_G0030045.1 mouse_genomes_project 5 134797894 134838406 + MGP_LPJ_P0074486 Rabgef1 protein_coding protein_coding MGP_LPJ_T0074487.1 MGP_LPJ_G0030045.1 mouse_genomes_project 5 134814686 134836716 + MGP_LPJ_P0074487 Rabgef1 protein_coding protein_coding MGP_LPJ_T0074488.1 MGP_LPJ_G0030045.1 mouse_genomes_project 5 134814686 134852427 + MGP_LPJ_P0074488 Rabgef1 protein_coding protein_coding MGP_LPJ_T0074489.1 MGP_LPJ_G0030045.1 mouse_genomes_project 5 134814733 134834954 + Rabgef1 protein_coding processed_transcript MGP_LPJ_T0074490.1 MGP_LPJ_G0030045.1 mouse_genomes_project 5 134814745 134818849 + Rabgef1 protein_coding retained_intron MGP_LPJ_T0074491.1 MGP_LPJ_G0030045.1 mouse_genomes_project 5 134834916 134838955 + Rabgef1 protein_coding retained_intron MGP_LPJ_T0074492.1 MGP_LPJ_G0030045.1 mouse_genomes_project 5 134839996 134851073 + Rabgef1 protein_coding retained_intron MGP_LPJ_T0074493.1 MGP_LPJ_G0030045.1 mouse_genomes_project 5 134851263 134852140 + MGP_LPJ_P0074493 Rabgef1 protein_coding nonsense_mediated_decay MGP_LPJ_T0073795.1 MGP_LPJ_G0029934.1 mouse_genomes_project 5 125531392 125558570 - MGP_LPJ_P0073795 Mapkapk5 protein_coding protein_coding MGP_LPJ_T0073796.1 MGP_LPJ_G0029934.1 mouse_genomes_project 5 125531402 125557865 - MGP_LPJ_P0073796 Mapkapk5 protein_coding protein_coding MGP_LPJ_T0073797.1 MGP_LPJ_G0029934.1 mouse_genomes_project 5 125531406 125533608 - Mapkapk5 protein_coding retained_intron MGP_LPJ_T0073798.1 MGP_LPJ_G0029934.1 mouse_genomes_project 5 125531406 125532181 - Mapkapk5 protein_coding retained_intron MGP_LPJ_T0073799.1 MGP_LPJ_G0029934.1 mouse_genomes_project 5 125531406 125533541 - MGP_LPJ_P0073799 Mapkapk5 protein_coding protein_coding MGP_LPJ_T0073800.1 MGP_LPJ_G0029934.1 mouse_genomes_project 5 125531410 125545116 - Mapkapk5 protein_coding processed_transcript MGP_LPJ_T0073801.1 MGP_LPJ_G0029934.1 mouse_genomes_project 5 125531499 125557865 - MGP_LPJ_P0073801 Mapkapk5 protein_coding protein_coding MGP_LPJ_T0073802.1 MGP_LPJ_G0029934.1 mouse_genomes_project 5 125531499 125557865 - MGP_LPJ_P0073802 Mapkapk5 protein_coding protein_coding MGP_LPJ_T0073803.1 MGP_LPJ_G0029934.1 mouse_genomes_project 5 125532106 125557865 - Mapkapk5 protein_coding processed_transcript MGP_LPJ_T0073804.1 MGP_LPJ_G0029934.1 mouse_genomes_project 5 125532902 125538990 - Mapkapk5 protein_coding retained_intron MGP_LPJ_T0073805.1 MGP_LPJ_G0029934.1 mouse_genomes_project 5 125540531 125543246 - MGP_LPJ_P0073805 Mapkapk5 protein_coding nonsense_mediated_decay MGP_LPJ_T0073806.1 MGP_LPJ_G0029934.1 mouse_genomes_project 5 125540726 125557896 - MGP_LPJ_P0073806 Mapkapk5 protein_coding protein_coding MGP_LPJ_T0073807.1 MGP_LPJ_G0029934.1 mouse_genomes_project 5 125541815 125544579 - Mapkapk5 protein_coding processed_transcript MGP_LPJ_T0074706.1 MGP_LPJ_G0030078.1 mouse_genomes_project 5 140097802 140113566 + MGP_LPJ_P0074706 Tbl2 protein_coding protein_coding MGP_LPJ_T0074707.1 MGP_LPJ_G0030078.1 mouse_genomes_project 5 140097831 140107635 + MGP_LPJ_P0074707 Tbl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074708.1 MGP_LPJ_G0030078.1 mouse_genomes_project 5 140097831 140105512 + MGP_LPJ_P0074708 Tbl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074709.1 MGP_LPJ_G0030078.1 mouse_genomes_project 5 140097836 140102622 + MGP_LPJ_P0074709 Tbl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074710.1 MGP_LPJ_G0030078.1 mouse_genomes_project 5 140100937 140105550 + MGP_LPJ_P0074710 Tbl2 protein_coding protein_coding MGP_LPJ_T0001709.1 MGP_LPJ_G0001622.1 mouse_genomes_project 5 73209378 73211485 - TEC TEC MGP_LPJ_T0071558.1 MGP_LPJ_G0029466.1 mouse_genomes_project 5 64192666 64209822 + MGP_LPJ_P0071558 Tbc1d1 protein_coding protein_coding MGP_LPJ_T0071559.1 MGP_LPJ_G0029466.1 mouse_genomes_project 5 64195798 64397638 + MGP_LPJ_P0071559 Tbc1d1 protein_coding protein_coding MGP_LPJ_T0071560.1 MGP_LPJ_G0029466.1 mouse_genomes_project 5 64196167 64397638 + MGP_LPJ_P0071560 Tbc1d1 protein_coding protein_coding MGP_LPJ_T0071561.1 MGP_LPJ_G0029466.1 mouse_genomes_project 5 64196558 64210563 + Tbc1d1 protein_coding retained_intron MGP_LPJ_T0071562.1 MGP_LPJ_G0029466.1 mouse_genomes_project 5 64196558 64397638 + MGP_LPJ_P0071562 Tbc1d1 protein_coding protein_coding MGP_LPJ_T0071563.1 MGP_LPJ_G0029466.1 mouse_genomes_project 5 64270269 64397638 + MGP_LPJ_P0071563 Tbc1d1 protein_coding protein_coding MGP_LPJ_T0071564.1 MGP_LPJ_G0029466.1 mouse_genomes_project 5 64321919 64331239 + MGP_LPJ_P0071564 Tbc1d1 protein_coding nonsense_mediated_decay MGP_LPJ_T0071565.1 MGP_LPJ_G0029466.1 mouse_genomes_project 5 64344991 64397633 + Tbc1d1 protein_coding processed_transcript MGP_LPJ_T0001621.1 MGP_LPJ_G0001535.1 mouse_genomes_project 5 51501273 51503718 - TEC TEC MGP_LPJ_T0072261.1 MGP_LPJ_G0029597.1 mouse_genomes_project 5 89357366 89360778 + MGP_LPJ_P0072261 2310003L06Rik protein_coding protein_coding MGP_LPJ_T0101371.1 MGP_LPJ_G0039568.1 mouse_genomes_project 5 155662628 155663501 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101372.1 MGP_LPJ_G0039568.1 mouse_genomes_project 5 155662920 155663691 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0072195.1 MGP_LPJ_G0029578.1 mouse_genomes_project 5 88297620 88309259 + MGP_LPJ_P0072195 Ugt2b35 protein_coding protein_coding MGP_LPJ_T0073438.1 MGP_LPJ_G0029860.1 mouse_genomes_project 5 118549346 118564505 - MGP_LPJ_P0073438 Mlec protein_coding protein_coding MGP_LPJ_T0073439.1 MGP_LPJ_G0029860.1 mouse_genomes_project 5 118554473 118557364 - Mlec protein_coding processed_transcript MGP_LPJ_T0004883.1 MGP_LPJ_G0004201.1 mouse_genomes_project 5 140867830 140869742 - Srrm3os antisense antisense MGP_LPJ_T0008393.1 MGP_LPJ_G0006813.1 mouse_genomes_project 5 131156590 131186161 + Gm43757 lincRNA lincRNA MGP_LPJ_T0008394.1 MGP_LPJ_G0006813.1 mouse_genomes_project 5 131156612 131161489 + Gm43757 lincRNA lincRNA MGP_LPJ_T0001784.1 MGP_LPJ_G0001696.1 mouse_genomes_project 5 114197465 114199843 + TEC TEC MGP_LPJ_T0072635.1 MGP_LPJ_G0029690.1 mouse_genomes_project 5 102774260 102793776 - MGP_LPJ_P0072635 Coq2 protein_coding protein_coding MGP_LPJ_T0072636.1 MGP_LPJ_G0029690.1 mouse_genomes_project 5 102774795 102793691 - MGP_LPJ_P0072636 Coq2 protein_coding nonsense_mediated_decay MGP_LPJ_T0072637.1 MGP_LPJ_G0029690.1 mouse_genomes_project 5 102777483 102793784 - MGP_LPJ_P0072637 Coq2 protein_coding nonsense_mediated_decay MGP_LPJ_T0070973.1 MGP_LPJ_G0029367.1 mouse_genomes_project 5 33235144 33298031 + MGP_LPJ_P0070973 Add1 protein_coding protein_coding MGP_LPJ_T0070974.1 MGP_LPJ_G0029367.1 mouse_genomes_project 5 33235245 33271264 + MGP_LPJ_P0070974 Add1 protein_coding protein_coding MGP_LPJ_T0070975.1 MGP_LPJ_G0029367.1 mouse_genomes_project 5 33235249 33271264 + MGP_LPJ_P0070975 Add1 protein_coding protein_coding MGP_LPJ_T0070976.1 MGP_LPJ_G0029367.1 mouse_genomes_project 5 33235284 33266996 + Add1 protein_coding processed_transcript MGP_LPJ_T0070977.1 MGP_LPJ_G0029367.1 mouse_genomes_project 5 33235343 33298028 + MGP_LPJ_P0070977 Add1 protein_coding protein_coding MGP_LPJ_T0070978.1 MGP_LPJ_G0029367.1 mouse_genomes_project 5 33235353 33298031 + MGP_LPJ_P0070978 Add1 protein_coding protein_coding MGP_LPJ_T0070979.1 MGP_LPJ_G0029367.1 mouse_genomes_project 5 33235522 33298017 + MGP_LPJ_P0070979 Add1 protein_coding protein_coding MGP_LPJ_T0070980.1 MGP_LPJ_G0029367.1 mouse_genomes_project 5 33261710 33264484 + Add1 protein_coding retained_intron MGP_LPJ_T0070981.1 MGP_LPJ_G0029367.1 mouse_genomes_project 5 33266712 33296539 + MGP_LPJ_P0070981 Add1 protein_coding protein_coding MGP_LPJ_T0070982.1 MGP_LPJ_G0029367.1 mouse_genomes_project 5 33279946 33291042 + MGP_LPJ_P0070982 Add1 protein_coding protein_coding MGP_LPJ_T0070983.1 MGP_LPJ_G0029367.1 mouse_genomes_project 5 33282324 33286150 + Add1 protein_coding retained_intron MGP_LPJ_T0070984.1 MGP_LPJ_G0029367.1 mouse_genomes_project 5 33282465 33296354 + MGP_LPJ_P0070984 Add1 protein_coding protein_coding MGP_LPJ_T0070985.1 MGP_LPJ_G0029367.1 mouse_genomes_project 5 33285052 33298031 + MGP_LPJ_P0070985 Add1 protein_coding protein_coding MGP_LPJ_T0070986.1 MGP_LPJ_G0029367.1 mouse_genomes_project 5 33285547 33296464 + Add1 protein_coding retained_intron MGP_LPJ_T0070987.1 MGP_LPJ_G0029367.1 mouse_genomes_project 5 33285669 33294466 + Add1 protein_coding retained_intron MGP_LPJ_T0074369.1 MGP_LPJ_G0030022.1 mouse_genomes_project 5 133142125 133145371 + MGP_LPJ_P0074369 Fzd10 protein_coding protein_coding MGP_LPJ_T0073738.1 MGP_LPJ_G0029919.1 mouse_genomes_project 5 124753210 124763889 + MGP_LPJ_P0073738 Oas1h protein_coding protein_coding MGP_LPJ_T0073739.1 MGP_LPJ_G0029919.1 mouse_genomes_project 5 124753227 124763524 + MGP_LPJ_P0073739 Oas1h protein_coding protein_coding MGP_LPJ_T0014882.1 MGP_LPJ_G0012973.1 mouse_genomes_project 5 30830930 30831119 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001627.1 MGP_LPJ_G0001541.1 mouse_genomes_project 5 53439022 53440793 + TEC TEC MGP_LPJ_T0001567.1 MGP_LPJ_G0001481.1 mouse_genomes_project 5 43715857 43715996 + TEC TEC MGP_LPJ_T0099549.1 MGP_LPJ_G0037812.1 mouse_genomes_project 5 3460617 3460710 + Gm24686 snRNA snRNA MGP_LPJ_T0014864.1 MGP_LPJ_G0012955.1 mouse_genomes_project 5 24304944 24306043 + processed_pseudogene processed_pseudogene MGP_LPJ_T0071955.1 MGP_LPJ_G0029533.1 mouse_genomes_project 5 75058678 75123694 + MGP_LPJ_P0071955 Fip1l1 protein_coding protein_coding MGP_LPJ_T0071956.1 MGP_LPJ_G0029533.1 mouse_genomes_project 5 75058700 75123704 + MGP_LPJ_P0071956 Fip1l1 protein_coding protein_coding MGP_LPJ_T0071957.1 MGP_LPJ_G0029533.1 mouse_genomes_project 5 75058708 75117337 + MGP_LPJ_P0071957 Fip1l1 protein_coding protein_coding MGP_LPJ_T0071958.1 MGP_LPJ_G0029533.1 mouse_genomes_project 5 75058710 75121048 + MGP_LPJ_P0071958 Fip1l1 protein_coding protein_coding MGP_LPJ_T0071959.1 MGP_LPJ_G0029533.1 mouse_genomes_project 5 75058713 75063798 + Fip1l1 protein_coding retained_intron MGP_LPJ_T0071960.1 MGP_LPJ_G0029533.1 mouse_genomes_project 5 75058732 75116719 + MGP_LPJ_P0071960 Fip1l1 protein_coding protein_coding MGP_LPJ_T0071961.1 MGP_LPJ_G0029533.1 mouse_genomes_project 5 75058913 75110451 + Fip1l1 protein_coding retained_intron MGP_LPJ_T0071962.1 MGP_LPJ_G0029533.1 mouse_genomes_project 5 75059208 75068678 + Fip1l1 protein_coding processed_transcript MGP_LPJ_T0071963.1 MGP_LPJ_G0029533.1 mouse_genomes_project 5 75109756 75116819 + Fip1l1 protein_coding retained_intron MGP_LPJ_T0071964.1 MGP_LPJ_G0029533.1 mouse_genomes_project 5 75109801 75113244 + Fip1l1 protein_coding retained_intron MGP_LPJ_T0071965.1 MGP_LPJ_G0029533.1 mouse_genomes_project 5 75111148 75113439 + Fip1l1 protein_coding retained_intron MGP_LPJ_T0071966.1 MGP_LPJ_G0029533.1 mouse_genomes_project 5 75111822 75116909 + Fip1l1 protein_coding retained_intron MGP_LPJ_T0071971.1 MGP_LPJ_G0029533.1 mouse_genomes_project 5 75119622 75120833 + Fip1l1 protein_coding retained_intron MGP_LPJ_T0070587.1 MGP_LPJ_G0029308.1 mouse_genomes_project 5 29519437 29526614 - MGP_LPJ_P0070587 Slc30a3 protein_coding protein_coding MGP_LPJ_T0070588.1 MGP_LPJ_G0029308.1 mouse_genomes_project 5 29520722 29521615 - MGP_LPJ_P0070588 Slc30a3 protein_coding protein_coding MGP_LPJ_T0070589.1 MGP_LPJ_G0029308.1 mouse_genomes_project 5 29522040 29526726 - MGP_LPJ_P0070589 Slc30a3 protein_coding nonsense_mediated_decay MGP_LPJ_T0070590.1 MGP_LPJ_G0029308.1 mouse_genomes_project 5 29522597 29528052 - MGP_LPJ_P0070590 Slc30a3 protein_coding protein_coding MGP_LPJ_T0070591.1 MGP_LPJ_G0029308.1 mouse_genomes_project 5 29522633 29545027 - MGP_LPJ_P0070591 Slc30a3 protein_coding protein_coding MGP_LPJ_T0072511.1 MGP_LPJ_G0029664.1 mouse_genomes_project 5 97955724 97967078 - Cnot6l protein_coding retained_intron MGP_LPJ_T0072512.1 MGP_LPJ_G0029664.1 mouse_genomes_project 5 97955737 98052139 - MGP_LPJ_P0072512 Cnot6l protein_coding nonsense_mediated_decay MGP_LPJ_T0072513.1 MGP_LPJ_G0029664.1 mouse_genomes_project 5 97955885 98052139 - MGP_LPJ_P0072513 Cnot6l protein_coding protein_coding MGP_LPJ_T0072514.1 MGP_LPJ_G0029664.1 mouse_genomes_project 5 97957328 98022502 - MGP_LPJ_P0072514 Cnot6l protein_coding protein_coding MGP_LPJ_T0072515.1 MGP_LPJ_G0029664.1 mouse_genomes_project 5 97990216 98017679 - Cnot6l protein_coding retained_intron MGP_LPJ_T0072516.1 MGP_LPJ_G0029664.1 mouse_genomes_project 5 97990905 98052126 - MGP_LPJ_P0072516 Cnot6l protein_coding protein_coding MGP_LPJ_T0072517.1 MGP_LPJ_G0029664.1 mouse_genomes_project 5 98017679 98052255 - MGP_LPJ_P0072517 Cnot6l protein_coding protein_coding MGP_LPJ_T0072518.1 MGP_LPJ_G0029664.1 mouse_genomes_project 5 98017715 98054466 - MGP_LPJ_P0072518 Cnot6l protein_coding protein_coding MGP_LPJ_T0072519.1 MGP_LPJ_G0029664.1 mouse_genomes_project 5 98017826 98052147 - MGP_LPJ_P0072519 Cnot6l protein_coding protein_coding MGP_LPJ_T0001730.1 MGP_LPJ_G0001642.1 mouse_genomes_project 5 76909873 76914049 - TEC TEC MGP_LPJ_T0075419.1 MGP_LPJ_G0030222.1 mouse_genomes_project 5 148798402 148803076 - MGP_LPJ_P0075419 Actb protein_coding protein_coding MGP_LPJ_T0075420.1 MGP_LPJ_G0030222.1 mouse_genomes_project 5 148799987 148803024 - MGP_LPJ_P0075420 Actb protein_coding protein_coding MGP_LPJ_T0075421.1 MGP_LPJ_G0030222.1 mouse_genomes_project 5 148800680 148802151 - MGP_LPJ_P0075421 Actb protein_coding protein_coding MGP_LPJ_T0075422.1 MGP_LPJ_G0030222.1 mouse_genomes_project 5 148800724 148803047 - Actb protein_coding processed_transcript MGP_LPJ_T0075423.1 MGP_LPJ_G0030222.1 mouse_genomes_project 5 148801001 148803044 - MGP_LPJ_P0075423 Actb protein_coding protein_coding MGP_LPJ_T0075424.1 MGP_LPJ_G0030222.1 mouse_genomes_project 5 148801034 148802267 - MGP_LPJ_P0075424 Actb protein_coding protein_coding MGP_LPJ_T0075425.1 MGP_LPJ_G0030222.1 mouse_genomes_project 5 148801095 148802994 - Actb protein_coding retained_intron MGP_LPJ_T0075426.1 MGP_LPJ_G0030222.1 mouse_genomes_project 5 148801202 148803016 - Actb protein_coding retained_intron MGP_LPJ_T0008463.1 MGP_LPJ_G0006866.1 mouse_genomes_project 5 155417753 155468356 - Gm15406 lincRNA lincRNA MGP_LPJ_T0008465.1 MGP_LPJ_G0006866.1 mouse_genomes_project 5 155423478 155468299 - Gm15406 lincRNA lincRNA MGP_LPJ_T0001800.1 MGP_LPJ_G0001712.1 mouse_genomes_project 5 118211017 118223071 - TEC TEC MGP_LPJ_T0014983.1 MGP_LPJ_G0013074.1 mouse_genomes_project 5 75653360 75653649 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001698.1 MGP_LPJ_G0001611.1 mouse_genomes_project 5 68359560 68361214 - TEC TEC MGP_LPJ_T0015107.1 MGP_LPJ_G0013198.1 mouse_genomes_project 5 130240109 130240898 - processed_pseudogene processed_pseudogene MGP_LPJ_T0072554.1 MGP_LPJ_G0029675.1 mouse_genomes_project 5 100292799 100792029 + MGP_LPJ_P0072554 1700007G11Rik protein_coding protein_coding MGP_LPJ_T0072555.1 MGP_LPJ_G0029675.1 mouse_genomes_project 5 100292846 100313362 + 1700007G11Rik protein_coding processed_transcript MGP_LPJ_T0072556.1 MGP_LPJ_G0029675.1 mouse_genomes_project 5 100292851 100313757 + 1700007G11Rik protein_coding processed_transcript MGP_LPJ_T0072557.1 MGP_LPJ_G0029675.1 mouse_genomes_project 5 100292865 100792057 + MGP_LPJ_P0072557 1700007G11Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0001525.1 MGP_LPJ_G0001440.1 mouse_genomes_project 5 30430121 30430816 + TEC TEC MGP_LPJ_T0073481.1 MGP_LPJ_G0029870.1 mouse_genomes_project 5 118863516 118887167 + Msi1 protein_coding retained_intron MGP_LPJ_T0073482.1 MGP_LPJ_G0029870.1 mouse_genomes_project 5 118863565 118893409 + MGP_LPJ_P0073482 Msi1 protein_coding protein_coding MGP_LPJ_T0073483.1 MGP_LPJ_G0029870.1 mouse_genomes_project 5 118865597 118889101 + MGP_LPJ_P0073483 Msi1 protein_coding protein_coding MGP_LPJ_T0073484.1 MGP_LPJ_G0029870.1 mouse_genomes_project 5 118868410 118870654 + Msi1 protein_coding retained_intron MGP_LPJ_T0073485.1 MGP_LPJ_G0029870.1 mouse_genomes_project 5 118868753 118889094 + Msi1 protein_coding retained_intron MGP_LPJ_T0073486.1 MGP_LPJ_G0029870.1 mouse_genomes_project 5 118869302 118882539 + Msi1 protein_coding retained_intron MGP_LPJ_T0073487.1 MGP_LPJ_G0029870.1 mouse_genomes_project 5 118869998 118889078 + MGP_LPJ_P0073487 Msi1 protein_coding protein_coding MGP_LPJ_T0073488.1 MGP_LPJ_G0029870.1 mouse_genomes_project 5 118870500 118882758 + Msi1 protein_coding retained_intron MGP_LPJ_T0072833.1 MGP_LPJ_G0029736.1 mouse_genomes_project 5 110021228 110032101 + MGP_LPJ_P0072833 Ephx4 protein_coding protein_coding MGP_LPJ_T0072834.1 MGP_LPJ_G0029736.1 mouse_genomes_project 5 110021986 110048500 + MGP_LPJ_P0072834 Ephx4 protein_coding protein_coding MGP_LPJ_T0072835.1 MGP_LPJ_G0029736.1 mouse_genomes_project 5 110022265 110032009 + MGP_LPJ_P0072835 Ephx4 protein_coding protein_coding MGP_LPJ_T0072836.1 MGP_LPJ_G0029736.1 mouse_genomes_project 5 110024275 110032069 + MGP_LPJ_P0072836 Ephx4 protein_coding protein_coding MGP_LPJ_T0074987.1 MGP_LPJ_G0030134.1 mouse_genomes_project 5 142753774 142756400 - MGP_LPJ_P0074987 Gnb2 protein_coding protein_coding MGP_LPJ_T0074988.1 MGP_LPJ_G0030134.1 mouse_genomes_project 5 142753776 142754569 - Gnb2 protein_coding retained_intron MGP_LPJ_T0074989.1 MGP_LPJ_G0030134.1 mouse_genomes_project 5 142753805 142757436 - MGP_LPJ_P0074989 Gnb2 protein_coding protein_coding MGP_LPJ_T0074990.1 MGP_LPJ_G0030134.1 mouse_genomes_project 5 142754151 142758898 - MGP_LPJ_P0074990 Gnb2 protein_coding protein_coding MGP_LPJ_T0074991.1 MGP_LPJ_G0030134.1 mouse_genomes_project 5 142754213 142756548 - Gnb2 protein_coding retained_intron MGP_LPJ_T0074992.1 MGP_LPJ_G0030134.1 mouse_genomes_project 5 142754420 142755511 - Gnb2 protein_coding retained_intron MGP_LPJ_T0074993.1 MGP_LPJ_G0030134.1 mouse_genomes_project 5 142754444 142755469 - Gnb2 protein_coding retained_intron MGP_LPJ_T0074994.1 MGP_LPJ_G0030134.1 mouse_genomes_project 5 142754521 142755425 - Gnb2 protein_coding retained_intron MGP_LPJ_T0074995.1 MGP_LPJ_G0030134.1 mouse_genomes_project 5 142754668 142756687 - MGP_LPJ_P0074995 Gnb2 protein_coding protein_coding MGP_LPJ_T0074996.1 MGP_LPJ_G0030134.1 mouse_genomes_project 5 142754786 142757630 - MGP_LPJ_P0074996 Gnb2 protein_coding protein_coding MGP_LPJ_T0098642.1 MGP_LPJ_G0036914.1 mouse_genomes_project 5 150300712 150303836 + Dmrt1i sense_intronic sense_intronic MGP_LPJ_T0098643.1 MGP_LPJ_G0036914.1 mouse_genomes_project 5 150301314 150303793 + Dmrt1i sense_intronic sense_intronic MGP_LPJ_T0098644.1 MGP_LPJ_G0036914.1 mouse_genomes_project 5 150301314 150303793 + Dmrt1i sense_intronic sense_intronic MGP_LPJ_T0001763.1 MGP_LPJ_G0001675.1 mouse_genomes_project 5 104239279 104240316 - TEC TEC MGP_LPJ_T0010756.1 MGP_LPJ_G0008874.1 mouse_genomes_project 5 146105498 146105569 + Mir7038 miRNA miRNA MGP_LPJ_T0008353.1 MGP_LPJ_G0006790.1 mouse_genomes_project 5 123390919 123399394 + Gm16063 lincRNA lincRNA MGP_LPJ_T0014896.1 MGP_LPJ_G0012987.1 mouse_genomes_project 5 32951613 32952072 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001628.1 MGP_LPJ_G0001542.1 mouse_genomes_project 5 54374658 54377339 + TEC TEC MGP_LPJ_T0075918.1 MGP_LPJ_G0030323.1 mouse_genomes_project 5 158241377 158249846 - MGP_LPJ_P0075918 Rfc3 protein_coding protein_coding MGP_LPJ_T0075919.1 MGP_LPJ_G0030323.1 mouse_genomes_project 5 158241440 158242755 - Rfc3 protein_coding retained_intron MGP_LPJ_T0075920.1 MGP_LPJ_G0030323.1 mouse_genomes_project 5 158241442 158243385 - Rfc3 protein_coding retained_intron MGP_LPJ_T0075921.1 MGP_LPJ_G0030323.1 mouse_genomes_project 5 158241445 158249806 - Rfc3 protein_coding retained_intron MGP_LPJ_T0075922.1 MGP_LPJ_G0030323.1 mouse_genomes_project 5 158243039 158249812 - Rfc3 protein_coding retained_intron MGP_LPJ_T0075923.1 MGP_LPJ_G0030323.1 mouse_genomes_project 5 158245591 158249799 - Rfc3 protein_coding retained_intron MGP_LPJ_T0075924.1 MGP_LPJ_G0030323.1 mouse_genomes_project 5 158248188 158249831 - Rfc3 protein_coding retained_intron MGP_LPJ_T0010759.1 MGP_LPJ_G0008877.1 mouse_genomes_project 5 149061095 149061221 + Gm44405 miRNA miRNA MGP_LPJ_T0015099.1 MGP_LPJ_G0013190.1 mouse_genomes_project 5 126474212 126474830 + processed_pseudogene processed_pseudogene MGP_LPJ_T0074148.1 MGP_LPJ_G0029984.1 mouse_genomes_project 5 128219477 128242794 + MGP_LPJ_P0074148 Denr protein_coding protein_coding MGP_LPJ_T0074149.1 MGP_LPJ_G0029984.1 mouse_genomes_project 5 128219571 128220811 + Denr protein_coding processed_transcript MGP_LPJ_T0074150.1 MGP_LPJ_G0029984.1 mouse_genomes_project 5 128219577 128223540 + Denr protein_coding retained_intron MGP_LPJ_T0074151.1 MGP_LPJ_G0029984.1 mouse_genomes_project 5 128219584 128220791 + Denr protein_coding retained_intron MGP_LPJ_T0074152.1 MGP_LPJ_G0029984.1 mouse_genomes_project 5 128219791 128241094 + MGP_LPJ_P0074152 Denr protein_coding protein_coding MGP_LPJ_T0014993.1 MGP_LPJ_G0013084.1 mouse_genomes_project 5 79238232 79239097 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004655.1 MGP_LPJ_G0004033.1 mouse_genomes_project 5 5124902 5140816 - Gm15731 antisense antisense MGP_LPJ_T0014928.1 MGP_LPJ_G0013019.1 mouse_genomes_project 5 53634569 53635647 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004790.1 MGP_LPJ_G0004134.1 mouse_genomes_project 5 110255336 110259724 - A930041C12Rik antisense antisense MGP_LPJ_T0101357.1 MGP_LPJ_G0039560.1 mouse_genomes_project 5 73022677 73023927 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0072084.1 MGP_LPJ_G0029554.1 mouse_genomes_project 5 77669903 77716434 + MGP_LPJ_P0072084 Thegl protein_coding protein_coding MGP_LPJ_T0072085.1 MGP_LPJ_G0029554.1 mouse_genomes_project 5 77669903 77716441 + MGP_LPJ_P0072085 Thegl protein_coding protein_coding MGP_LPJ_T0072086.1 MGP_LPJ_G0029554.1 mouse_genomes_project 5 77691432 77701874 + MGP_LPJ_P0072086 Thegl protein_coding protein_coding MGP_LPJ_T0015070.1 MGP_LPJ_G0013161.1 mouse_genomes_project 5 111728658 111731758 + processed_pseudogene processed_pseudogene MGP_LPJ_T0075112.1 MGP_LPJ_G0030158.1 mouse_genomes_project 5 143467201 143483376 - MGP_LPJ_P0075112 Zfp113 protein_coding protein_coding MGP_LPJ_T0075113.1 MGP_LPJ_G0030158.1 mouse_genomes_project 5 143473456 143480531 - MGP_LPJ_P0075113 Zfp113 protein_coding protein_coding MGP_LPJ_T0075114.1 MGP_LPJ_G0030158.1 mouse_genomes_project 5 143478210 143483332 - Zfp113 protein_coding retained_intron MGP_LPJ_T0075115.1 MGP_LPJ_G0030158.1 mouse_genomes_project 5 143478618 143483336 - MGP_LPJ_P0075115 Zfp113 protein_coding protein_coding MGP_LPJ_T0010687.1 MGP_LPJ_G0008805.1 mouse_genomes_project 5 21294520 21294566 - Gm28022 miRNA miRNA MGP_LPJ_T0014962.1 MGP_LPJ_G0013053.1 mouse_genomes_project 5 64226392 64227211 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015008.1 MGP_LPJ_G0013099.1 mouse_genomes_project 5 88954776 88956690 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100823.1 MGP_LPJ_G0039086.1 mouse_genomes_project 5 21745780 21745850 - Snord93 snoRNA snoRNA MGP_LPJ_T0073516.1 MGP_LPJ_G0029875.1 mouse_genomes_project 5 119021643 119089897 + MGP_LPJ_P0073516 Gcn1l1 protein_coding protein_coding MGP_LPJ_T0073517.1 MGP_LPJ_G0029875.1 mouse_genomes_project 5 119021661 119048700 + Gcn1l1 protein_coding retained_intron MGP_LPJ_T0073518.1 MGP_LPJ_G0029875.1 mouse_genomes_project 5 119021663 119045745 + Gcn1l1 protein_coding retained_intron MGP_LPJ_T0073519.1 MGP_LPJ_G0029875.1 mouse_genomes_project 5 119021665 119049221 + Gcn1l1 protein_coding retained_intron MGP_LPJ_T0073520.1 MGP_LPJ_G0029875.1 mouse_genomes_project 5 119021692 119023610 + Gcn1l1 protein_coding retained_intron MGP_LPJ_T0073521.1 MGP_LPJ_G0029875.1 mouse_genomes_project 5 119072922 119089891 + Gcn1l1 protein_coding processed_transcript MGP_LPJ_T0073522.1 MGP_LPJ_G0029875.1 mouse_genomes_project 5 119077058 119077825 + Gcn1l1 protein_coding retained_intron MGP_LPJ_T0073523.1 MGP_LPJ_G0029875.1 mouse_genomes_project 5 119079035 119080631 + Gcn1l1 protein_coding processed_transcript MGP_LPJ_T0073524.1 MGP_LPJ_G0029875.1 mouse_genomes_project 5 119082113 119083261 + Gcn1l1 protein_coding retained_intron MGP_LPJ_T0014827.1 MGP_LPJ_G0012918.1 mouse_genomes_project 5 17397757 17399450 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014833.1 MGP_LPJ_G0012924.1 mouse_genomes_project 5 19169564 19169816 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099559.1 MGP_LPJ_G0037822.1 mouse_genomes_project 5 22570918 22571019 - Gm22333 snRNA snRNA MGP_LPJ_T0001644.1 MGP_LPJ_G0001558.1 mouse_genomes_project 5 57821677 57825163 + TEC TEC MGP_LPJ_T0010718.1 MGP_LPJ_G0008836.1 mouse_genomes_project 5 100450935 100451044 - Mir703 miRNA miRNA MGP_LPJ_T0073791.1 MGP_LPJ_G0029931.1 mouse_genomes_project 5 125502143 125506552 - MGP_LPJ_P0073791 Adam1b protein_coding protein_coding MGP_LPJ_T0072679.1 MGP_LPJ_G0029699.1 mouse_genomes_project 5 104665928 105087742 + MGP_LPJ_P0072679 Arhgap24 protein_coding protein_coding MGP_LPJ_T0072680.1 MGP_LPJ_G0029699.1 mouse_genomes_project 5 104665928 105087741 + MGP_LPJ_P0072680 Arhgap24 protein_coding protein_coding MGP_LPJ_T0072681.1 MGP_LPJ_G0029699.1 mouse_genomes_project 5 104666067 104850496 + Arhgap24 protein_coding retained_intron MGP_LPJ_T0072682.1 MGP_LPJ_G0029699.1 mouse_genomes_project 5 104846685 105087742 + MGP_LPJ_P0072682 Arhgap24 protein_coding protein_coding MGP_LPJ_T0072683.1 MGP_LPJ_G0029699.1 mouse_genomes_project 5 104905378 105087742 + MGP_LPJ_P0072683 Arhgap24 protein_coding protein_coding MGP_LPJ_T0072684.1 MGP_LPJ_G0029699.1 mouse_genomes_project 5 104951825 105087743 + MGP_LPJ_P0072684 Arhgap24 protein_coding protein_coding MGP_LPJ_T0072685.1 MGP_LPJ_G0029699.1 mouse_genomes_project 5 104994183 105064559 + Arhgap24 protein_coding processed_transcript MGP_LPJ_T0072686.1 MGP_LPJ_G0029699.1 mouse_genomes_project 5 105033009 105087742 + MGP_LPJ_P0072686 Arhgap24 protein_coding protein_coding MGP_LPJ_T0073527.1 MGP_LPJ_G0029877.1 mouse_genomes_project 5 119116491 119202465 - MGP_LPJ_P0073527 Ccdc64 protein_coding unknown_likely_coding MGP_LPJ_T0073528.1 MGP_LPJ_G0029877.1 mouse_genomes_project 5 119116498 119118118 - Ccdc64 protein_coding retained_intron MGP_LPJ_T0073529.1 MGP_LPJ_G0029877.1 mouse_genomes_project 5 119116498 119202596 - MGP_LPJ_P0073529 Ccdc64 protein_coding protein_coding MGP_LPJ_T0073530.1 MGP_LPJ_G0029877.1 mouse_genomes_project 5 119116500 119121310 - MGP_LPJ_P0073530 Ccdc64 protein_coding protein_coding MGP_LPJ_T0073531.1 MGP_LPJ_G0029877.1 mouse_genomes_project 5 119116503 119121305 - MGP_LPJ_P0073531 Ccdc64 protein_coding protein_coding MGP_LPJ_T0073532.1 MGP_LPJ_G0029877.1 mouse_genomes_project 5 119117590 119121310 - MGP_LPJ_P0073532 Ccdc64 protein_coding nonsense_mediated_decay MGP_LPJ_T0073533.1 MGP_LPJ_G0029877.1 mouse_genomes_project 5 119120142 119138672 - MGP_LPJ_P0073533 Ccdc64 protein_coding protein_coding MGP_LPJ_T0073534.1 MGP_LPJ_G0029877.1 mouse_genomes_project 5 119128552 119138938 - Ccdc64 protein_coding retained_intron MGP_LPJ_T0073535.1 MGP_LPJ_G0029877.1 mouse_genomes_project 5 119135660 119187534 - Ccdc64 protein_coding processed_transcript MGP_LPJ_T0073536.1 MGP_LPJ_G0029877.1 mouse_genomes_project 5 119138592 119202342 - MGP_LPJ_P0073536 Ccdc64 protein_coding protein_coding MGP_LPJ_T0073537.1 MGP_LPJ_G0029877.1 mouse_genomes_project 5 119195438 119202403 - Ccdc64 protein_coding retained_intron MGP_LPJ_T0015160.1 MGP_LPJ_G0013251.1 mouse_genomes_project 5 153420795 153421287 - processed_pseudogene processed_pseudogene MGP_LPJ_T0069977.1 MGP_LPJ_G0029195.1 mouse_genomes_project 5 6265745 6325388 - MGP_LPJ_P0069977 Dmtf1 protein_coding protein_coding MGP_LPJ_T0069978.1 MGP_LPJ_G0029195.1 mouse_genomes_project 5 6265794 6325331 - MGP_LPJ_P0069978 Dmtf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0069979.1 MGP_LPJ_G0029195.1 mouse_genomes_project 5 6265798 6325361 - MGP_LPJ_P0069979 Dmtf1 protein_coding protein_coding MGP_LPJ_T0069980.1 MGP_LPJ_G0029195.1 mouse_genomes_project 5 6265799 6325364 - MGP_LPJ_P0069980 Dmtf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0069981.1 MGP_LPJ_G0029195.1 mouse_genomes_project 5 6265799 6325371 - MGP_LPJ_P0069981 Dmtf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0069982.1 MGP_LPJ_G0029195.1 mouse_genomes_project 5 6265803 6325355 - MGP_LPJ_P0069982 Dmtf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0069983.1 MGP_LPJ_G0029195.1 mouse_genomes_project 5 6265803 6302897 - MGP_LPJ_P0069983 Dmtf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0069984.1 MGP_LPJ_G0029195.1 mouse_genomes_project 5 6265995 6325283 - MGP_LPJ_P0069984 Dmtf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0069985.1 MGP_LPJ_G0029195.1 mouse_genomes_project 5 6266718 6267657 - Dmtf1 protein_coding retained_intron MGP_LPJ_T0069986.1 MGP_LPJ_G0029195.1 mouse_genomes_project 5 6266932 6325313 - MGP_LPJ_P0069986 Dmtf1 protein_coding protein_coding MGP_LPJ_T0069987.1 MGP_LPJ_G0029195.1 mouse_genomes_project 5 6268379 6273504 - MGP_LPJ_P0069987 Dmtf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0069988.1 MGP_LPJ_G0029195.1 mouse_genomes_project 5 6268983 6325355 - Dmtf1 protein_coding processed_transcript MGP_LPJ_T0069989.1 MGP_LPJ_G0029195.1 mouse_genomes_project 5 6276294 6325349 - Dmtf1 protein_coding retained_intron MGP_LPJ_T0069990.1 MGP_LPJ_G0029195.1 mouse_genomes_project 5 6278217 6325328 - MGP_LPJ_P0069990 Dmtf1 protein_coding protein_coding MGP_LPJ_T0069991.1 MGP_LPJ_G0029195.1 mouse_genomes_project 5 6279471 6301794 - MGP_LPJ_P0069991 Dmtf1 protein_coding protein_coding MGP_LPJ_T0069992.1 MGP_LPJ_G0029195.1 mouse_genomes_project 5 6291118 6325346 - Dmtf1 protein_coding retained_intron MGP_LPJ_T0069993.1 MGP_LPJ_G0029195.1 mouse_genomes_project 5 6296108 6325361 - Dmtf1 protein_coding retained_intron MGP_LPJ_T0069994.1 MGP_LPJ_G0029195.1 mouse_genomes_project 5 6300179 6302687 - MGP_LPJ_P0069994 Dmtf1 protein_coding protein_coding MGP_LPJ_T0015083.1 MGP_LPJ_G0013174.1 mouse_genomes_project 5 117069841 117070209 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098618.1 MGP_LPJ_G0036892.1 mouse_genomes_project 5 29233130 29236001 + Gm19409 sense_intronic sense_intronic MGP_LPJ_T0008472.1 MGP_LPJ_G0006872.1 mouse_genomes_project 5 155634168 155635542 + Gm42787 lincRNA lincRNA MGP_LPJ_T0004738.1 MGP_LPJ_G0004100.1 mouse_genomes_project 5 72715760 72763884 + Gm20647 antisense antisense MGP_LPJ_T0070546.1 MGP_LPJ_G0029303.1 mouse_genomes_project 5 29376823 29381508 - MGP_LPJ_P0070546 Preb protein_coding protein_coding MGP_LPJ_T0070547.1 MGP_LPJ_G0029303.1 mouse_genomes_project 5 29377192 29380854 - Preb protein_coding processed_transcript MGP_LPJ_T0070548.1 MGP_LPJ_G0029303.1 mouse_genomes_project 5 29377318 29378009 - Preb protein_coding retained_intron MGP_LPJ_T0070549.1 MGP_LPJ_G0029303.1 mouse_genomes_project 5 29377468 29382872 - MGP_LPJ_P0070549 Preb protein_coding protein_coding MGP_LPJ_T0070550.1 MGP_LPJ_G0029303.1 mouse_genomes_project 5 29377757 29381431 - Preb protein_coding retained_intron MGP_LPJ_T0070551.1 MGP_LPJ_G0029303.1 mouse_genomes_project 5 29380742 29381429 - Preb protein_coding retained_intron MGP_LPJ_T0070552.1 MGP_LPJ_G0029303.1 mouse_genomes_project 5 29380890 29381993 - Preb protein_coding retained_intron MGP_LPJ_T0070553.1 MGP_LPJ_G0029303.1 mouse_genomes_project 5 29381477 29383037 - Preb protein_coding processed_transcript MGP_LPJ_T0070554.1 MGP_LPJ_G0029303.1 mouse_genomes_project 5 29381647 29382322 - Preb protein_coding processed_transcript MGP_LPJ_T0070555.1 MGP_LPJ_G0029303.1 mouse_genomes_project 5 29381705 29383019 - Preb protein_coding retained_intron MGP_LPJ_T0070556.1 MGP_LPJ_G0029303.1 mouse_genomes_project 5 29382127 29383029 - Preb protein_coding processed_transcript MGP_LPJ_T0008054.1 MGP_LPJ_G0006577.1 mouse_genomes_project 5 4776473 5052340 - lincRNA lincRNA MGP_LPJ_T0015174.1 MGP_LPJ_G0013265.1 mouse_genomes_project 5 157632233 157634089 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001850.1 MGP_LPJ_G0001762.1 mouse_genomes_project 5 128621252 128622858 - TEC TEC MGP_LPJ_T0004859.1 MGP_LPJ_G0004182.1 mouse_genomes_project 5 128582832 128583544 + Gm42425 antisense antisense MGP_LPJ_T0008065.1 MGP_LPJ_G0006587.1 mouse_genomes_project 5 20527897 20535610 + lincRNA lincRNA MGP_LPJ_T0008066.1 MGP_LPJ_G0006587.1 mouse_genomes_project 5 20527904 20787018 + lincRNA lincRNA MGP_LPJ_T0008067.1 MGP_LPJ_G0006587.1 mouse_genomes_project 5 20531366 20534803 + lincRNA lincRNA MGP_LPJ_T0072310.1 MGP_LPJ_G0029617.1 mouse_genomes_project 5 90947849 91004694 + MGP_LPJ_P0072310 Npffr2 protein_coding protein_coding MGP_LPJ_T0073740.1 MGP_LPJ_G0029920.1 mouse_genomes_project 5 124773145 124801535 - MGP_LPJ_P0073740 protein_coding protein_coding MGP_LPJ_T0100849.1 MGP_LPJ_G0039112.1 mouse_genomes_project 5 100513910 100514041 + Gm24279 snoRNA snoRNA MGP_LPJ_T0074074.1 MGP_LPJ_G0029973.1 mouse_genomes_project 5 127755882 127757824 - MGP_LPJ_P0074074 Il31 protein_coding protein_coding MGP_LPJ_T0074075.1 MGP_LPJ_G0029973.1 mouse_genomes_project 5 127755883 127758318 - MGP_LPJ_P0074075 Il31 protein_coding protein_coding MGP_LPJ_T0074076.1 MGP_LPJ_G0029973.1 mouse_genomes_project 5 127756126 127765122 - MGP_LPJ_P0074076 Il31 protein_coding protein_coding MGP_LPJ_T0074077.1 MGP_LPJ_G0029973.1 mouse_genomes_project 5 127757886 127758247 - Il31 protein_coding processed_transcript MGP_LPJ_T0014822.1 MGP_LPJ_G0012913.1 mouse_genomes_project 5 14775919 14776172 + processed_pseudogene processed_pseudogene MGP_LPJ_T0074236.1 MGP_LPJ_G0029997.1 mouse_genomes_project 5 128797922 128823865 + MGP_LPJ_P0074236 Kmt5a protein_coding protein_coding MGP_LPJ_T0074237.1 MGP_LPJ_G0029997.1 mouse_genomes_project 5 128797959 128823067 + MGP_LPJ_P0074237 Kmt5a protein_coding nonsense_mediated_decay MGP_LPJ_T0074238.1 MGP_LPJ_G0029997.1 mouse_genomes_project 5 128797977 128799248 + Kmt5a protein_coding retained_intron MGP_LPJ_T0074239.1 MGP_LPJ_G0029997.1 mouse_genomes_project 5 128803492 128822516 + MGP_LPJ_P0074239 Kmt5a protein_coding protein_coding MGP_LPJ_T0074240.1 MGP_LPJ_G0029997.1 mouse_genomes_project 5 128803504 128823099 + Kmt5a protein_coding processed_transcript MGP_LPJ_T0074241.1 MGP_LPJ_G0029997.1 mouse_genomes_project 5 128803685 128823819 + MGP_LPJ_P0074241 Kmt5a protein_coding protein_coding MGP_LPJ_T0074242.1 MGP_LPJ_G0029997.1 mouse_genomes_project 5 128803783 128810983 + Kmt5a protein_coding retained_intron MGP_LPJ_T0074243.1 MGP_LPJ_G0029997.1 mouse_genomes_project 5 128804703 128818674 + Kmt5a protein_coding processed_transcript MGP_LPJ_T0074244.1 MGP_LPJ_G0029997.1 mouse_genomes_project 5 128804961 128822187 + Kmt5a protein_coding processed_transcript MGP_LPJ_T0074245.1 MGP_LPJ_G0029997.1 mouse_genomes_project 5 128805004 128810450 + Kmt5a protein_coding processed_transcript MGP_LPJ_T0074246.1 MGP_LPJ_G0029997.1 mouse_genomes_project 5 128809836 128821348 + Kmt5a protein_coding processed_transcript MGP_LPJ_T0074247.1 MGP_LPJ_G0029997.1 mouse_genomes_project 5 128810049 128821499 + Kmt5a protein_coding retained_intron MGP_LPJ_T0074248.1 MGP_LPJ_G0029997.1 mouse_genomes_project 5 128810850 128822393 + Kmt5a protein_coding retained_intron MGP_LPJ_T0072756.1 MGP_LPJ_G0029720.1 mouse_genomes_project 5 107488312 107598573 - MGP_LPJ_P0072756 protein_coding protein_coding MGP_LPJ_T0072757.1 MGP_LPJ_G0029720.1 mouse_genomes_project 5 107488313 107598573 - protein_coding retained_intron MGP_LPJ_T0072763.1 MGP_LPJ_G0029720.1 mouse_genomes_project 5 107542098 107598573 - MGP_LPJ_P0072763 protein_coding protein_coding MGP_LPJ_T0071379.1 MGP_LPJ_G0029436.1 mouse_genomes_project 5 44875037 44906457 + MGP_LPJ_P0071379 Ncapg protein_coding protein_coding MGP_LPJ_T0071380.1 MGP_LPJ_G0029436.1 mouse_genomes_project 5 44880989 44906038 + Ncapg protein_coding retained_intron MGP_LPJ_T0071381.1 MGP_LPJ_G0029436.1 mouse_genomes_project 5 44882840 44885003 + Ncapg protein_coding retained_intron MGP_LPJ_T0071382.1 MGP_LPJ_G0029436.1 mouse_genomes_project 5 44882891 44905984 + Ncapg protein_coding retained_intron MGP_LPJ_T0071383.1 MGP_LPJ_G0029436.1 mouse_genomes_project 5 44897927 44902841 + Ncapg protein_coding retained_intron MGP_LPJ_T0071386.1 MGP_LPJ_G0029436.1 mouse_genomes_project 5 44904576 44905981 + Ncapg protein_coding retained_intron MGP_LPJ_T0001813.1 MGP_LPJ_G0001725.1 mouse_genomes_project 5 121482413 121482520 + TEC TEC MGP_LPJ_T0008401.1 MGP_LPJ_G0006818.1 mouse_genomes_project 5 131560083 131560871 + Gm43475 lincRNA lincRNA MGP_LPJ_T0071245.1 MGP_LPJ_G0029410.1 mouse_genomes_project 5 37133524 37162735 + MGP_LPJ_P0071245 Otop1 protein_coding protein_coding MGP_LPJ_T0071246.1 MGP_LPJ_G0029410.1 mouse_genomes_project 5 37134956 37162743 + Otop1 protein_coding processed_transcript MGP_LPJ_T0071247.1 MGP_LPJ_G0029410.1 mouse_genomes_project 5 37134956 37162734 + MGP_LPJ_P0071247 Otop1 protein_coding protein_coding MGP_LPJ_T0071248.1 MGP_LPJ_G0029410.1 mouse_genomes_project 5 37144455 37161903 + Otop1 protein_coding processed_transcript MGP_LPJ_T0072742.1 MGP_LPJ_G0029715.1 mouse_genomes_project 5 106710674 106716607 + MGP_LPJ_P0072742 Spp1 protein_coding protein_coding MGP_LPJ_T0072743.1 MGP_LPJ_G0029715.1 mouse_genomes_project 5 106710674 106716605 + MGP_LPJ_P0072743 Spp1 protein_coding protein_coding MGP_LPJ_T0072744.1 MGP_LPJ_G0029715.1 mouse_genomes_project 5 106710677 106716604 + MGP_LPJ_P0072744 Spp1 protein_coding protein_coding MGP_LPJ_T0072745.1 MGP_LPJ_G0029715.1 mouse_genomes_project 5 106710695 106715099 + MGP_LPJ_P0072745 Spp1 protein_coding protein_coding MGP_LPJ_T0072746.1 MGP_LPJ_G0029715.1 mouse_genomes_project 5 106710698 106715061 + MGP_LPJ_P0072746 Spp1 protein_coding protein_coding MGP_LPJ_T0072747.1 MGP_LPJ_G0029715.1 mouse_genomes_project 5 106710714 106713267 + MGP_LPJ_P0072747 Spp1 protein_coding protein_coding MGP_LPJ_T0072748.1 MGP_LPJ_G0029715.1 mouse_genomes_project 5 106711748 106716600 + MGP_LPJ_P0072748 Spp1 protein_coding protein_coding MGP_LPJ_T0008476.1 MGP_LPJ_G0006876.1 mouse_genomes_project 5 155747874 155761438 - Gm29264 lincRNA lincRNA MGP_LPJ_T0070480.1 MGP_LPJ_G0029293.1 mouse_genomes_project 5 29058347 29068720 + MGP_LPJ_P0070480 Slc35f6 protein_coding protein_coding MGP_LPJ_T0070481.1 MGP_LPJ_G0029293.1 mouse_genomes_project 5 29058359 29063749 + Slc35f6 protein_coding retained_intron MGP_LPJ_T0070482.1 MGP_LPJ_G0029293.1 mouse_genomes_project 5 29058373 29068667 + MGP_LPJ_P0070482 Slc35f6 protein_coding nonsense_mediated_decay MGP_LPJ_T0070483.1 MGP_LPJ_G0029293.1 mouse_genomes_project 5 29058382 29066576 + Slc35f6 protein_coding retained_intron MGP_LPJ_T0070484.1 MGP_LPJ_G0029293.1 mouse_genomes_project 5 29058418 29068667 + MGP_LPJ_P0070484 Slc35f6 protein_coding nonsense_mediated_decay MGP_LPJ_T0070485.1 MGP_LPJ_G0029293.1 mouse_genomes_project 5 29058428 29068325 + MGP_LPJ_P0070485 Slc35f6 protein_coding protein_coding MGP_LPJ_T0010725.1 MGP_LPJ_G0008843.1 mouse_genomes_project 5 116559679 116559735 - Mir7230 miRNA miRNA MGP_LPJ_T0069902.1 MGP_LPJ_G0029184.1 mouse_genomes_project 5 4381736 4382109 + 4921511H03Rik protein_coding processed_transcript MGP_LPJ_T0069903.1 MGP_LPJ_G0029184.1 mouse_genomes_project 5 4381742 4389109 + MGP_LPJ_P0069903 4921511H03Rik protein_coding protein_coding MGP_LPJ_T0069904.1 MGP_LPJ_G0029184.1 mouse_genomes_project 5 4381749 4385191 + MGP_LPJ_P0069904 4921511H03Rik protein_coding protein_coding MGP_LPJ_T0069905.1 MGP_LPJ_G0029184.1 mouse_genomes_project 5 4381763 4383427 + MGP_LPJ_P0069905 4921511H03Rik protein_coding protein_coding MGP_LPJ_T0014935.1 MGP_LPJ_G0013026.1 mouse_genomes_project 5 55736579 55736892 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001580.1 MGP_LPJ_G0001494.1 mouse_genomes_project 5 46019555 46021409 + TEC TEC MGP_LPJ_T0074067.1 MGP_LPJ_G0029971.1 mouse_genomes_project 5 127604650 127636466 + Bcl7a protein_coding processed_transcript MGP_LPJ_T0074068.1 MGP_LPJ_G0029971.1 mouse_genomes_project 5 127605264 127637378 + MGP_LPJ_P0074068 Bcl7a protein_coding protein_coding MGP_LPJ_T0074069.1 MGP_LPJ_G0029971.1 mouse_genomes_project 5 127605316 127622774 + MGP_LPJ_P0074069 Bcl7a protein_coding protein_coding MGP_LPJ_T0008352.1 MGP_LPJ_G0006789.1 mouse_genomes_project 5 123281330 123290776 - Gm31314 lincRNA lincRNA MGP_LPJ_T0075291.1 MGP_LPJ_G0030192.1 mouse_genomes_project 5 145379476 145403807 - MGP_LPJ_P0075291 Ints1 protein_coding protein_coding MGP_LPJ_T0075292.1 MGP_LPJ_G0030192.1 mouse_genomes_project 5 145379479 145383056 - Ints1 protein_coding retained_intron MGP_LPJ_T0075293.1 MGP_LPJ_G0030192.1 mouse_genomes_project 5 145379479 145403772 - MGP_LPJ_P0075293 Ints1 protein_coding protein_coding MGP_LPJ_T0075294.1 MGP_LPJ_G0030192.1 mouse_genomes_project 5 145379480 145383176 - MGP_LPJ_P0075294 Ints1 protein_coding protein_coding MGP_LPJ_T0075295.1 MGP_LPJ_G0030192.1 mouse_genomes_project 5 145389765 145390688 - Ints1 protein_coding retained_intron MGP_LPJ_T0075296.1 MGP_LPJ_G0030192.1 mouse_genomes_project 5 145393456 145396285 - Ints1 protein_coding retained_intron MGP_LPJ_T0075297.1 MGP_LPJ_G0030192.1 mouse_genomes_project 5 145395484 145403808 - Ints1 protein_coding retained_intron MGP_LPJ_T0075298.1 MGP_LPJ_G0030192.1 mouse_genomes_project 5 145395810 145396841 - Ints1 protein_coding retained_intron MGP_LPJ_T0075299.1 MGP_LPJ_G0030192.1 mouse_genomes_project 5 145397718 145400076 - Ints1 protein_coding retained_intron MGP_LPJ_T0075300.1 MGP_LPJ_G0030192.1 mouse_genomes_project 5 145400962 145403808 - MGP_LPJ_P0075300 Ints1 protein_coding protein_coding MGP_LPJ_T0073742.1 MGP_LPJ_G0029922.1 mouse_genomes_project 5 124862437 124869095 + MGP_LPJ_P0073742 protein_coding protein_coding MGP_LPJ_T0014808.1 MGP_LPJ_G0012899.1 mouse_genomes_project 5 7180333 7181078 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004889.1 MGP_LPJ_G0004207.1 mouse_genomes_project 5 143131751 143132207 + Gm43495 antisense antisense MGP_LPJ_T0099607.1 MGP_LPJ_G0037870.1 mouse_genomes_project 5 113707753 113707860 - Gm22716 snRNA snRNA MGP_LPJ_T0072571.1 MGP_LPJ_G0029680.1 mouse_genomes_project 5 101305309 101767728 - MGP_LPJ_P0072571 protein_coding protein_coding MGP_LPJ_T0072572.1 MGP_LPJ_G0029680.1 mouse_genomes_project 5 101385817 101767745 - MGP_LPJ_P0072572 protein_coding protein_coding MGP_LPJ_T0072573.1 MGP_LPJ_G0029680.1 mouse_genomes_project 5 101577473 101767748 - protein_coding retained_intron MGP_LPJ_T0072574.1 MGP_LPJ_G0029680.1 mouse_genomes_project 5 101715900 101767504 - protein_coding processed_transcript MGP_LPJ_T0072575.1 MGP_LPJ_G0029680.1 mouse_genomes_project 5 101762147 101767739 - MGP_LPJ_P0072575 protein_coding protein_coding MGP_LPJ_T0072300.1 MGP_LPJ_G0029615.1 mouse_genomes_project 5 90295785 90296825 + Slc4a4 protein_coding processed_transcript MGP_LPJ_T0072301.1 MGP_LPJ_G0029615.1 mouse_genomes_project 5 90295821 90651828 + MGP_LPJ_P0072301 Slc4a4 protein_coding protein_coding MGP_LPJ_T0072302.1 MGP_LPJ_G0029615.1 mouse_genomes_project 5 90295823 90652755 + MGP_LPJ_P0072302 Slc4a4 protein_coding protein_coding MGP_LPJ_T0072303.1 MGP_LPJ_G0029615.1 mouse_genomes_project 5 90345407 90367630 + MGP_LPJ_P0072303 Slc4a4 protein_coding protein_coding MGP_LPJ_T0072304.1 MGP_LPJ_G0029615.1 mouse_genomes_project 5 90345625 90652573 + MGP_LPJ_P0072304 Slc4a4 protein_coding protein_coding MGP_LPJ_T0072305.1 MGP_LPJ_G0029615.1 mouse_genomes_project 5 90435061 90651822 + MGP_LPJ_P0072305 Slc4a4 protein_coding protein_coding MGP_LPJ_T0072306.1 MGP_LPJ_G0029615.1 mouse_genomes_project 5 90435172 90451175 + MGP_LPJ_P0072306 Slc4a4 protein_coding protein_coding MGP_LPJ_T0072307.1 MGP_LPJ_G0029615.1 mouse_genomes_project 5 90435187 90530561 + MGP_LPJ_P0072307 Slc4a4 protein_coding protein_coding MGP_LPJ_T0008424.1 MGP_LPJ_G0006833.1 mouse_genomes_project 5 140657510 140679551 - Gm43091 lincRNA lincRNA MGP_LPJ_T0018114.1 MGP_LPJ_G0015521.1 mouse_genomes_project 5 74585109 74586370 + Dancr processed_transcript lincRNA MGP_LPJ_T0018115.1 MGP_LPJ_G0015521.1 mouse_genomes_project 5 74585115 74586369 + Dancr processed_transcript retained_intron MGP_LPJ_T0018070.1 MGP_LPJ_G0015507.1 mouse_genomes_project 5 23289143 23291260 + 2900005J15Rik processed_transcript processed_transcript MGP_LPJ_T0018071.1 MGP_LPJ_G0015507.1 mouse_genomes_project 5 23289618 23298355 + 2900005J15Rik processed_transcript processed_transcript MGP_LPJ_T0008123.1 MGP_LPJ_G0006620.1 mouse_genomes_project 5 38157138 38211032 - Gm43453 lincRNA lincRNA MGP_LPJ_T0008092.1 MGP_LPJ_G0006602.1 mouse_genomes_project 5 28281271 28287226 - Gm42450 lincRNA lincRNA MGP_LPJ_T0014973.1 MGP_LPJ_G0013064.1 mouse_genomes_project 5 70875916 70876530 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001899.1 MGP_LPJ_G0001810.1 mouse_genomes_project 5 137606205 137606493 + TEC TEC MGP_LPJ_T0099595.1 MGP_LPJ_G0037858.1 mouse_genomes_project 5 93849741 93849860 + Gm23031 snRNA snRNA MGP_LPJ_T0001701.1 MGP_LPJ_G0001614.1 mouse_genomes_project 5 69524684 69528547 - TEC TEC MGP_LPJ_T0099598.1 MGP_LPJ_G0037861.1 mouse_genomes_project 5 98825650 98825845 + Gm24623 snRNA snRNA MGP_LPJ_T0014870.1 MGP_LPJ_G0012961.1 mouse_genomes_project 5 26137999 26138480 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001913.1 MGP_LPJ_G0001823.1 mouse_genomes_project 5 141614782 141621833 - TEC TEC MGP_LPJ_T0001677.1 MGP_LPJ_G0001590.1 mouse_genomes_project 5 66428083 66431033 + TEC TEC MGP_LPJ_T0072180.1 MGP_LPJ_G0029573.1 mouse_genomes_project 5 87908202 87935145 - MGP_LPJ_P0072180 Tmprss11b protein_coding protein_coding MGP_LPJ_T0072725.1 MGP_LPJ_G0029707.1 mouse_genomes_project 5 106219016 106252701 - MGP_LPJ_P0072725 Hsd17b11 protein_coding protein_coding MGP_LPJ_T0072726.1 MGP_LPJ_G0029707.1 mouse_genomes_project 5 106230980 106252620 - MGP_LPJ_P0072726 Hsd17b11 protein_coding protein_coding MGP_LPJ_T0075098.1 MGP_LPJ_G0030155.1 mouse_genomes_project 5 143288356 143297824 + MGP_LPJ_P0075098 Azgp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0075099.1 MGP_LPJ_G0030155.1 mouse_genomes_project 5 143288375 143297824 + MGP_LPJ_P0075099 Azgp1 protein_coding protein_coding MGP_LPJ_T0075100.1 MGP_LPJ_G0030155.1 mouse_genomes_project 5 143288404 143293036 + Azgp1 protein_coding retained_intron MGP_LPJ_T0074647.1 MGP_LPJ_G0030066.1 mouse_genomes_project 5 139609709 139656179 - MGP_LPJ_P0074647 Eln protein_coding protein_coding MGP_LPJ_T0074648.1 MGP_LPJ_G0030066.1 mouse_genomes_project 5 139609954 139632848 - Eln protein_coding retained_intron MGP_LPJ_T0074649.1 MGP_LPJ_G0030066.1 mouse_genomes_project 5 139609954 139656102 - MGP_LPJ_P0074649 Eln protein_coding nonsense_mediated_decay MGP_LPJ_T0074650.1 MGP_LPJ_G0030066.1 mouse_genomes_project 5 139633150 139636653 - Eln protein_coding retained_intron MGP_LPJ_T0074651.1 MGP_LPJ_G0030066.1 mouse_genomes_project 5 139653581 139656109 - Eln protein_coding retained_intron MGP_LPJ_T0008254.1 MGP_LPJ_G0006726.1 mouse_genomes_project 5 105544710 105547719 + lincRNA lincRNA MGP_LPJ_T0074814.1 MGP_LPJ_G0030101.1 mouse_genomes_project 5 141076878 141085992 + MGP_LPJ_P0074814 Upk3b protein_coding protein_coding MGP_LPJ_T0004917.1 MGP_LPJ_G0004224.1 mouse_genomes_project 5 155937415 155939152 - Gm43151 antisense antisense MGP_LPJ_T0072172.1 MGP_LPJ_G0029570.1 mouse_genomes_project 5 87663875 87716062 - MGP_LPJ_P0072172 Tmprss11a protein_coding protein_coding MGP_LPJ_T0072173.1 MGP_LPJ_G0029570.1 mouse_genomes_project 5 87669340 87672401 - Tmprss11a protein_coding retained_intron MGP_LPJ_T0099619.1 MGP_LPJ_G0037882.1 mouse_genomes_project 5 129023612 129023710 - Gm24854 snRNA snRNA MGP_LPJ_T0071367.1 MGP_LPJ_G0029433.1 mouse_genomes_project 5 44682920 44703827 + MGP_LPJ_P0071367 Lap3 protein_coding protein_coding MGP_LPJ_T0071368.1 MGP_LPJ_G0029433.1 mouse_genomes_project 5 44683050 44690314 + Lap3 protein_coding retained_intron MGP_LPJ_T0071369.1 MGP_LPJ_G0029433.1 mouse_genomes_project 5 44683072 44692950 + MGP_LPJ_P0071369 Lap3 protein_coding protein_coding MGP_LPJ_T0071370.1 MGP_LPJ_G0029433.1 mouse_genomes_project 5 44687776 44694395 + Lap3 protein_coding retained_intron MGP_LPJ_T0071371.1 MGP_LPJ_G0029433.1 mouse_genomes_project 5 44689907 44694366 + Lap3 protein_coding retained_intron MGP_LPJ_T0071372.1 MGP_LPJ_G0029433.1 mouse_genomes_project 5 44700344 44702509 + Lap3 protein_coding retained_intron MGP_LPJ_T0008331.1 MGP_LPJ_G0006772.1 mouse_genomes_project 5 118785835 118828644 + Gm13832 lincRNA lincRNA MGP_LPJ_T0008332.1 MGP_LPJ_G0006772.1 mouse_genomes_project 5 118785854 118856285 + Gm13832 lincRNA lincRNA MGP_LPJ_T0014797.1 MGP_LPJ_G0012888.1 mouse_genomes_project 5 3791340 3791906 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008336.1 MGP_LPJ_G0006775.1 mouse_genomes_project 5 119798086 119800301 + Gm13839 lincRNA lincRNA MGP_LPJ_T0098646.1 MGP_LPJ_G0036916.1 mouse_genomes_project 5 156597395 156597660 + Gm42558 sense_intronic sense_intronic MGP_LPJ_T0015098.1 MGP_LPJ_G0013189.1 mouse_genomes_project 5 125537971 125538304 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018135.1 MGP_LPJ_G0015530.1 mouse_genomes_project 5 128965120 128995748 + Tctn2 processed_transcript processed_transcript MGP_LPJ_T0018136.1 MGP_LPJ_G0015530.1 mouse_genomes_project 5 128965120 128968495 + Tctn2 processed_transcript retained_intron MGP_LPJ_T0018137.1 MGP_LPJ_G0015530.1 mouse_genomes_project 5 128965155 128972086 + Tctn2 processed_transcript retained_intron MGP_LPJ_T0018138.1 MGP_LPJ_G0015530.1 mouse_genomes_project 5 128965158 128969741 + Tctn2 processed_transcript retained_intron MGP_LPJ_T0018139.1 MGP_LPJ_G0015530.1 mouse_genomes_project 5 128965163 128986566 + Tctn2 processed_transcript retained_intron MGP_LPJ_T0018140.1 MGP_LPJ_G0015530.1 mouse_genomes_project 5 128965168 128995468 + Tctn2 processed_transcript processed_transcript MGP_LPJ_T0073741.1 MGP_LPJ_G0029921.1 mouse_genomes_project 5 124773264 124807201 - MGP_LPJ_P0073741 protein_coding protein_coding MGP_LPJ_T0073636.1 MGP_LPJ_G0029894.1 mouse_genomes_project 5 121700895 121797503 - MGP_LPJ_P0073636 Fbxw8 protein_coding protein_coding MGP_LPJ_T0073637.1 MGP_LPJ_G0029894.1 mouse_genomes_project 5 121700916 121797420 - MGP_LPJ_P0073637 Fbxw8 protein_coding unknown_likely_coding MGP_LPJ_T0073638.1 MGP_LPJ_G0029894.1 mouse_genomes_project 5 121712985 121797465 - Fbxw8 protein_coding retained_intron MGP_LPJ_T0071262.1 MGP_LPJ_G0029413.1 mouse_genomes_project 5 37400669 37435646 - MGP_LPJ_P0071262 Wdr1 protein_coding protein_coding MGP_LPJ_T0071263.1 MGP_LPJ_G0029413.1 mouse_genomes_project 5 37401436 37403983 - Wdr1 protein_coding retained_intron MGP_LPJ_T0071264.1 MGP_LPJ_G0029413.1 mouse_genomes_project 5 37401577 37403871 - Wdr1 protein_coding retained_intron MGP_LPJ_T0071265.1 MGP_LPJ_G0029413.1 mouse_genomes_project 5 37403051 37403707 - Wdr1 protein_coding retained_intron MGP_LPJ_T0071266.1 MGP_LPJ_G0029413.1 mouse_genomes_project 5 37403824 37405853 - Wdr1 protein_coding processed_transcript MGP_LPJ_T0071267.1 MGP_LPJ_G0029413.1 mouse_genomes_project 5 37410974 37435371 - MGP_LPJ_P0071267 Wdr1 protein_coding protein_coding MGP_LPJ_T0071268.1 MGP_LPJ_G0029413.1 mouse_genomes_project 5 37414032 37435390 - Wdr1 protein_coding retained_intron MGP_LPJ_T0071269.1 MGP_LPJ_G0029413.1 mouse_genomes_project 5 37419521 37437061 - Wdr1 protein_coding processed_transcript MGP_LPJ_T0071270.1 MGP_LPJ_G0029413.1 mouse_genomes_project 5 37425068 37435646 - Wdr1 protein_coding retained_intron MGP_LPJ_T0071271.1 MGP_LPJ_G0029413.1 mouse_genomes_project 5 37431480 37435383 - Wdr1 protein_coding retained_intron MGP_LPJ_T0071272.1 MGP_LPJ_G0029413.1 mouse_genomes_project 5 37434748 37435415 - Wdr1 protein_coding retained_intron MGP_LPJ_T0070101.1 MGP_LPJ_G0029214.1 mouse_genomes_project 5 19247083 19384018 - MGP_LPJ_P0070101 Ccdc146 protein_coding protein_coding MGP_LPJ_T0070102.1 MGP_LPJ_G0029214.1 mouse_genomes_project 5 19272759 19384018 - MGP_LPJ_P0070102 Ccdc146 protein_coding protein_coding MGP_LPJ_T0070103.1 MGP_LPJ_G0029214.1 mouse_genomes_project 5 19273042 19288168 - Ccdc146 protein_coding retained_intron MGP_LPJ_T0070104.1 MGP_LPJ_G0029214.1 mouse_genomes_project 5 19273967 19278493 - Ccdc146 protein_coding retained_intron MGP_LPJ_T0070105.1 MGP_LPJ_G0029214.1 mouse_genomes_project 5 19278546 19288382 - Ccdc146 protein_coding processed_transcript MGP_LPJ_T0070349.1 MGP_LPJ_G0029263.1 mouse_genomes_project 5 23982337 23999779 + Actr3b protein_coding processed_transcript MGP_LPJ_T0070350.1 MGP_LPJ_G0029263.1 mouse_genomes_project 5 23982383 24083084 + MGP_LPJ_P0070350 Actr3b protein_coding protein_coding MGP_LPJ_T0014840.1 MGP_LPJ_G0012931.1 mouse_genomes_project 5 20271515 20271887 - processed_pseudogene processed_pseudogene MGP_LPJ_T0070504.1 MGP_LPJ_G0029296.1 mouse_genomes_project 5 29232151 29288687 + MGP_LPJ_P0070504 Mapre3 protein_coding protein_coding MGP_LPJ_T0070505.1 MGP_LPJ_G0029296.1 mouse_genomes_project 5 29232243 29288640 + Mapre3 protein_coding retained_intron MGP_LPJ_T0070506.1 MGP_LPJ_G0029296.1 mouse_genomes_project 5 29232264 29288640 + MGP_LPJ_P0070506 Mapre3 protein_coding protein_coding MGP_LPJ_T0070507.1 MGP_LPJ_G0029296.1 mouse_genomes_project 5 29232270 29285158 + Mapre3 protein_coding retained_intron MGP_LPJ_T0070508.1 MGP_LPJ_G0029296.1 mouse_genomes_project 5 29276379 29285939 + MGP_LPJ_P0070508 Mapre3 protein_coding protein_coding MGP_LPJ_T0070509.1 MGP_LPJ_G0029296.1 mouse_genomes_project 5 29287102 29287836 + Mapre3 protein_coding retained_intron MGP_LPJ_T0008378.1 MGP_LPJ_G0006805.1 mouse_genomes_project 5 128354211 128388867 - lincRNA lincRNA MGP_LPJ_T0073912.1 MGP_LPJ_G0029950.1 mouse_genomes_project 5 126532612 126541344 + MGP_LPJ_P0073912 Vps29 protein_coding protein_coding MGP_LPJ_T0073913.1 MGP_LPJ_G0029950.1 mouse_genomes_project 5 126532633 126540550 + MGP_LPJ_P0073913 Vps29 protein_coding protein_coding MGP_LPJ_T0073914.1 MGP_LPJ_G0029950.1 mouse_genomes_project 5 126532636 126540295 + Vps29 protein_coding processed_transcript MGP_LPJ_T0073915.1 MGP_LPJ_G0029950.1 mouse_genomes_project 5 126532636 126542222 + MGP_LPJ_P0073915 Vps29 protein_coding protein_coding MGP_LPJ_T0073916.1 MGP_LPJ_G0029950.1 mouse_genomes_project 5 126532649 126541269 + MGP_LPJ_P0073916 Vps29 protein_coding nonsense_mediated_decay MGP_LPJ_T0073917.1 MGP_LPJ_G0029950.1 mouse_genomes_project 5 126532667 126540244 + MGP_LPJ_P0073917 Vps29 protein_coding protein_coding MGP_LPJ_T0073918.1 MGP_LPJ_G0029950.1 mouse_genomes_project 5 126532687 126540326 + MGP_LPJ_P0073918 Vps29 protein_coding nonsense_mediated_decay MGP_LPJ_T0073919.1 MGP_LPJ_G0029950.1 mouse_genomes_project 5 126535684 126539048 + Vps29 protein_coding retained_intron MGP_LPJ_T0001888.1 MGP_LPJ_G0001799.1 mouse_genomes_project 5 136792225 136799061 - TEC TEC MGP_LPJ_T0098040.1 MGP_LPJ_G0036321.1 mouse_genomes_project 5 44138937 44139319 - pseudogene pseudogene MGP_LPJ_T0072489.1 MGP_LPJ_G0029659.1 mouse_genomes_project 5 94678000 94761132 + MGP_LPJ_P0072489 Sept11 protein_coding protein_coding MGP_LPJ_T0072490.1 MGP_LPJ_G0029659.1 mouse_genomes_project 5 94678001 94678641 + Sept11 protein_coding retained_intron MGP_LPJ_T0072491.1 MGP_LPJ_G0029659.1 mouse_genomes_project 5 94678001 94756143 + MGP_LPJ_P0072491 Sept11 protein_coding protein_coding MGP_LPJ_T0072492.1 MGP_LPJ_G0029659.1 mouse_genomes_project 5 94678011 94745407 + MGP_LPJ_P0072492 Sept11 protein_coding protein_coding MGP_LPJ_T0072493.1 MGP_LPJ_G0029659.1 mouse_genomes_project 5 94678014 94762612 + MGP_LPJ_P0072493 Sept11 protein_coding protein_coding MGP_LPJ_T0072494.1 MGP_LPJ_G0029659.1 mouse_genomes_project 5 94678089 94762622 + MGP_LPJ_P0072494 Sept11 protein_coding protein_coding MGP_LPJ_T0072495.1 MGP_LPJ_G0029659.1 mouse_genomes_project 5 94678099 94732662 + MGP_LPJ_P0072495 Sept11 protein_coding protein_coding MGP_LPJ_T0072496.1 MGP_LPJ_G0029659.1 mouse_genomes_project 5 94678134 94762251 + MGP_LPJ_P0072496 Sept11 protein_coding protein_coding MGP_LPJ_T0072497.1 MGP_LPJ_G0029659.1 mouse_genomes_project 5 94732621 94741838 + Sept11 protein_coding retained_intron MGP_LPJ_T0072165.1 MGP_LPJ_G0029567.1 mouse_genomes_project 5 87426156 87447327 - MGP_LPJ_P0072165 Gnrhr protein_coding protein_coding MGP_LPJ_T0072166.1 MGP_LPJ_G0029567.1 mouse_genomes_project 5 87427396 87447296 - MGP_LPJ_P0072166 Gnrhr protein_coding protein_coding MGP_LPJ_T0072167.1 MGP_LPJ_G0029567.1 mouse_genomes_project 5 87430967 87447272 - MGP_LPJ_P0072167 Gnrhr protein_coding protein_coding MGP_LPJ_T0099597.1 MGP_LPJ_G0037860.1 mouse_genomes_project 5 97753208 97753315 + Gm25937 snRNA snRNA MGP_LPJ_T0001716.1 MGP_LPJ_G0001628.1 mouse_genomes_project 5 73741913 73742906 + TEC TEC MGP_LPJ_T0008170.1 MGP_LPJ_G0006660.1 mouse_genomes_project 5 64755402 64758463 - Gm26761 lincRNA lincRNA MGP_LPJ_T0099606.1 MGP_LPJ_G0037869.1 mouse_genomes_project 5 109916317 109916419 + Gm22557 snRNA snRNA MGP_LPJ_T0008423.1 MGP_LPJ_G0006832.1 mouse_genomes_project 5 139847880 139848733 + 4933439J24Rik lincRNA lincRNA MGP_LPJ_T0072157.1 MGP_LPJ_G0029565.1 mouse_genomes_project 5 87306242 87338963 + MGP_LPJ_P0072157 Stap1 protein_coding protein_coding MGP_LPJ_T0072158.1 MGP_LPJ_G0029565.1 mouse_genomes_project 5 87306246 87330655 + Stap1 protein_coding retained_intron MGP_LPJ_T0072159.1 MGP_LPJ_G0029565.1 mouse_genomes_project 5 87306270 87319453 + Stap1 protein_coding retained_intron MGP_LPJ_T0072160.1 MGP_LPJ_G0029565.1 mouse_genomes_project 5 87306279 87319449 + Stap1 protein_coding retained_intron MGP_LPJ_T0072161.1 MGP_LPJ_G0029565.1 mouse_genomes_project 5 87306308 87336757 + MGP_LPJ_P0072161 Stap1 protein_coding protein_coding MGP_LPJ_T0072162.1 MGP_LPJ_G0029565.1 mouse_genomes_project 5 87319966 87327717 + Stap1 protein_coding retained_intron MGP_LPJ_T0072920.1 MGP_LPJ_G0029752.1 mouse_genomes_project 5 110955307 110967181 + MGP_LPJ_P0072920 Dr1 protein_coding protein_coding MGP_LPJ_T0072921.1 MGP_LPJ_G0029752.1 mouse_genomes_project 5 110963579 110965270 + Dr1 protein_coding processed_transcript MGP_LPJ_T0070906.1 MGP_LPJ_G0029355.1 mouse_genomes_project 5 32525112 32553900 - MGP_LPJ_P0070906 Nelfa protein_coding protein_coding MGP_LPJ_T0070907.1 MGP_LPJ_G0029355.1 mouse_genomes_project 5 32536596 32553737 - Nelfa protein_coding retained_intron MGP_LPJ_T0072838.1 MGP_LPJ_G0029738.1 mouse_genomes_project 5 110056395 110135405 + MGP_LPJ_P0072838 protein_coding unknown_likely_coding MGP_LPJ_T0072839.1 MGP_LPJ_G0029738.1 mouse_genomes_project 5 110056429 110115779 + MGP_LPJ_P0072839 protein_coding protein_coding MGP_LPJ_T0072840.1 MGP_LPJ_G0029738.1 mouse_genomes_project 5 110072237 110092053 + protein_coding processed_transcript MGP_LPJ_T0074214.1 MGP_LPJ_G0029995.1 mouse_genomes_project 5 128697878 128705301 - MGP_LPJ_P0074214 protein_coding protein_coding MGP_LPJ_T0074215.1 MGP_LPJ_G0029995.1 mouse_genomes_project 5 128698017 128703901 - MGP_LPJ_P0074215 protein_coding protein_coding MGP_LPJ_T0074216.1 MGP_LPJ_G0029995.1 mouse_genomes_project 5 128698036 128705880 - MGP_LPJ_P0074216 protein_coding protein_coding MGP_LPJ_T0074217.1 MGP_LPJ_G0029995.1 mouse_genomes_project 5 128698762 128716981 - MGP_LPJ_P0074217 protein_coding protein_coding MGP_LPJ_T0001476.1 MGP_LPJ_G0001393.1 mouse_genomes_project 5 8035689 8037782 - TEC TEC MGP_LPJ_T0001659.1 MGP_LPJ_G0001572.1 mouse_genomes_project 5 65574811 65576286 - TEC TEC MGP_LPJ_T0015108.1 MGP_LPJ_G0013199.1 mouse_genomes_project 5 130437900 130439659 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010721.1 MGP_LPJ_G0008839.1 mouse_genomes_project 5 109453530 109453629 - Gm27527 miRNA miRNA MGP_LPJ_T0072753.1 MGP_LPJ_G0029718.1 mouse_genomes_project 5 107202745 107205873 - protein_coding processed_transcript MGP_LPJ_T0100864.1 MGP_LPJ_G0039127.1 mouse_genomes_project 5 153139888 153139959 + Gm25091 snoRNA snoRNA MGP_LPJ_T0008265.1 MGP_LPJ_G0006732.1 mouse_genomes_project 5 108622623 108631064 + Gm32736 lincRNA lincRNA MGP_LPJ_T0004850.1 MGP_LPJ_G0004178.1 mouse_genomes_project 5 127592659 127605152 - Gm15860 antisense antisense MGP_LPJ_T0004851.1 MGP_LPJ_G0004178.1 mouse_genomes_project 5 127594203 127605254 - Gm15860 antisense antisense MGP_LPJ_T0004852.1 MGP_LPJ_G0004178.1 mouse_genomes_project 5 127594339 127602716 - Gm15860 antisense antisense MGP_LPJ_T0075817.1 MGP_LPJ_G0030308.1 mouse_genomes_project 5 155955368 155995594 + MGP_LPJ_P0075817 Tex26 protein_coding protein_coding MGP_LPJ_T0075818.1 MGP_LPJ_G0030308.1 mouse_genomes_project 5 155955390 155956710 + Tex26 protein_coding processed_transcript MGP_LPJ_T0075819.1 MGP_LPJ_G0030308.1 mouse_genomes_project 5 155955414 155995594 + MGP_LPJ_P0075819 Tex26 protein_coding nonsense_mediated_decay MGP_LPJ_T0075820.1 MGP_LPJ_G0030308.1 mouse_genomes_project 5 155955423 155995506 + MGP_LPJ_P0075820 Tex26 protein_coding nonsense_mediated_decay MGP_LPJ_T0075821.1 MGP_LPJ_G0030308.1 mouse_genomes_project 5 155955427 155995506 + MGP_LPJ_P0075821 Tex26 protein_coding nonsense_mediated_decay MGP_LPJ_T0075822.1 MGP_LPJ_G0030308.1 mouse_genomes_project 5 155955435 155995412 + MGP_LPJ_P0075822 Tex26 protein_coding protein_coding MGP_LPJ_T0099631.1 MGP_LPJ_G0037894.1 mouse_genomes_project 5 157151573 157151674 - Gm23641 snRNA snRNA MGP_LPJ_T0015019.1 MGP_LPJ_G0013110.1 mouse_genomes_project 5 91584384 91584831 + processed_pseudogene processed_pseudogene MGP_LPJ_T0072586.1 MGP_LPJ_G0029683.1 mouse_genomes_project 5 102091404 102093896 - Hnrnpdl protein_coding processed_transcript MGP_LPJ_T0072587.1 MGP_LPJ_G0029683.1 mouse_genomes_project 5 102091404 102098667 - MGP_LPJ_P0072587 Hnrnpdl protein_coding protein_coding MGP_LPJ_T0072588.1 MGP_LPJ_G0029683.1 mouse_genomes_project 5 102092548 102098314 - MGP_LPJ_P0072588 Hnrnpdl protein_coding protein_coding MGP_LPJ_T0072589.1 MGP_LPJ_G0029683.1 mouse_genomes_project 5 102092554 102099109 - MGP_LPJ_P0072589 Hnrnpdl protein_coding nonsense_mediated_decay MGP_LPJ_T0072590.1 MGP_LPJ_G0029683.1 mouse_genomes_project 5 102092655 102094553 - Hnrnpdl protein_coding retained_intron MGP_LPJ_T0072591.1 MGP_LPJ_G0029683.1 mouse_genomes_project 5 102093253 102098340 - MGP_LPJ_P0072591 Hnrnpdl protein_coding nonsense_mediated_decay MGP_LPJ_T0072592.1 MGP_LPJ_G0029683.1 mouse_genomes_project 5 102093787 102096574 - Hnrnpdl protein_coding retained_intron MGP_LPJ_T0073261.1 MGP_LPJ_G0029827.1 mouse_genomes_project 5 117071152 117072177 - MGP_LPJ_P0073261 Selplg protein_coding protein_coding MGP_LPJ_T0073262.1 MGP_LPJ_G0029827.1 mouse_genomes_project 5 117071163 117083248 - MGP_LPJ_P0073262 Selplg protein_coding protein_coding MGP_LPJ_T0073263.1 MGP_LPJ_G0029827.1 mouse_genomes_project 5 117071171 117071934 - MGP_LPJ_P0073263 Selplg protein_coding protein_coding MGP_LPJ_T0073264.1 MGP_LPJ_G0029827.1 mouse_genomes_project 5 117071171 117071874 - MGP_LPJ_P0073264 Selplg protein_coding protein_coding MGP_LPJ_T0073265.1 MGP_LPJ_G0029827.1 mouse_genomes_project 5 117072662 117085393 - MGP_LPJ_P0073265 Selplg protein_coding protein_coding MGP_LPJ_T0073266.1 MGP_LPJ_G0029827.1 mouse_genomes_project 5 117080907 117083219 - Selplg protein_coding retained_intron MGP_LPJ_T0008152.1 MGP_LPJ_G0006646.1 mouse_genomes_project 5 53894253 53902809 + Gm10440 lincRNA lincRNA MGP_LPJ_T0015157.1 MGP_LPJ_G0013248.1 mouse_genomes_project 5 152243577 152243778 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001878.1 MGP_LPJ_G0001789.1 mouse_genomes_project 5 136375050 136376347 - TEC TEC MGP_LPJ_T0072174.1 MGP_LPJ_G0029571.1 mouse_genomes_project 5 87735168 87767413 - MGP_LPJ_P0072174 Tmprss11g protein_coding protein_coding MGP_LPJ_T0072175.1 MGP_LPJ_G0029571.1 mouse_genomes_project 5 87735659 87767384 - MGP_LPJ_P0072175 Tmprss11g protein_coding protein_coding MGP_LPJ_T0072176.1 MGP_LPJ_G0029571.1 mouse_genomes_project 5 87737647 87739932 - Tmprss11g protein_coding retained_intron MGP_LPJ_T0075339.1 MGP_LPJ_G0030204.1 mouse_genomes_project 5 146267065 146269019 - MGP_LPJ_P0075339 Grifin protein_coding protein_coding MGP_LPJ_T0071865.1 MGP_LPJ_G0029517.1 mouse_genomes_project 5 73155289 73281104 - MGP_LPJ_P0071865 Tec protein_coding protein_coding MGP_LPJ_T0071866.1 MGP_LPJ_G0029517.1 mouse_genomes_project 5 73155296 73281119 - MGP_LPJ_P0071866 Tec protein_coding protein_coding MGP_LPJ_T0071867.1 MGP_LPJ_G0029517.1 mouse_genomes_project 5 73155307 73281056 - MGP_LPJ_P0071867 Tec protein_coding nonsense_mediated_decay MGP_LPJ_T0071868.1 MGP_LPJ_G0029517.1 mouse_genomes_project 5 73155311 73281106 - MGP_LPJ_P0071868 Tec protein_coding protein_coding MGP_LPJ_T0071869.1 MGP_LPJ_G0029517.1 mouse_genomes_project 5 73155311 73185498 - MGP_LPJ_P0071869 Tec protein_coding nonsense_mediated_decay MGP_LPJ_T0071870.1 MGP_LPJ_G0029517.1 mouse_genomes_project 5 73155311 73281143 - MGP_LPJ_P0071870 Tec protein_coding nonsense_mediated_decay MGP_LPJ_T0071871.1 MGP_LPJ_G0029517.1 mouse_genomes_project 5 73172789 73281109 - MGP_LPJ_P0071871 Tec protein_coding nonsense_mediated_decay MGP_LPJ_T0071872.1 MGP_LPJ_G0029517.1 mouse_genomes_project 5 73222586 73281103 - Tec protein_coding retained_intron MGP_LPJ_T0071873.1 MGP_LPJ_G0029517.1 mouse_genomes_project 5 73222890 73243765 - MGP_LPJ_P0071873 Tec protein_coding protein_coding MGP_LPJ_T0014858.1 MGP_LPJ_G0012949.1 mouse_genomes_project 5 23623906 23624156 - processed_pseudogene processed_pseudogene MGP_LPJ_T0070753.1 MGP_LPJ_G0029332.1 mouse_genomes_project 5 30177715 30211517 + MGP_LPJ_P0070753 Bre protein_coding protein_coding MGP_LPJ_T0070754.1 MGP_LPJ_G0029332.1 mouse_genomes_project 5 30177935 30211937 + Bre protein_coding retained_intron MGP_LPJ_T0070755.1 MGP_LPJ_G0029332.1 mouse_genomes_project 5 30177961 30188411 + Bre protein_coding processed_transcript MGP_LPJ_T0070756.1 MGP_LPJ_G0029332.1 mouse_genomes_project 5 30177971 30504056 + Bre protein_coding retained_intron MGP_LPJ_T0070757.1 MGP_LPJ_G0029332.1 mouse_genomes_project 5 30177973 30588206 + MGP_LPJ_P0070757 Bre protein_coding protein_coding MGP_LPJ_T0070758.1 MGP_LPJ_G0029332.1 mouse_genomes_project 5 30177979 30327019 + Bre protein_coding retained_intron MGP_LPJ_T0070759.1 MGP_LPJ_G0029332.1 mouse_genomes_project 5 30177995 30588136 + MGP_LPJ_P0070759 Bre protein_coding protein_coding MGP_LPJ_T0070760.1 MGP_LPJ_G0029332.1 mouse_genomes_project 5 30178015 30588028 + MGP_LPJ_P0070760 Bre protein_coding protein_coding MGP_LPJ_T0070761.1 MGP_LPJ_G0029332.1 mouse_genomes_project 5 30178015 30588028 + MGP_LPJ_P0070761 Bre protein_coding protein_coding MGP_LPJ_T0070762.1 MGP_LPJ_G0029332.1 mouse_genomes_project 5 30178015 30588028 + MGP_LPJ_P0070762 Bre protein_coding protein_coding MGP_LPJ_T0070763.1 MGP_LPJ_G0029332.1 mouse_genomes_project 5 30178016 30315759 + MGP_LPJ_P0070763 Bre protein_coding nonsense_mediated_decay MGP_LPJ_T0070764.1 MGP_LPJ_G0029332.1 mouse_genomes_project 5 30181819 30560619 + MGP_LPJ_P0070764 Bre protein_coding nonsense_mediated_decay MGP_LPJ_T0070765.1 MGP_LPJ_G0029332.1 mouse_genomes_project 5 30279418 30315840 + Bre protein_coding processed_transcript MGP_LPJ_T0070766.1 MGP_LPJ_G0029332.1 mouse_genomes_project 5 30546381 30588042 + Bre protein_coding processed_transcript MGP_LPJ_T0070767.1 MGP_LPJ_G0029332.1 mouse_genomes_project 5 30583010 30588035 + Bre protein_coding processed_transcript MGP_LPJ_T0001674.1 MGP_LPJ_G0001587.1 mouse_genomes_project 5 66154669 66156245 + TEC TEC MGP_LPJ_T0001815.1 MGP_LPJ_G0001727.1 mouse_genomes_project 5 122249471 122250817 - TEC TEC MGP_LPJ_T0008323.1 MGP_LPJ_G0006768.1 mouse_genomes_project 5 117869959 117872687 + Gm13790 lincRNA lincRNA MGP_LPJ_T0004849.1 MGP_LPJ_G0004177.1 mouse_genomes_project 5 127551700 127568892 - Gm15857 antisense antisense MGP_LPJ_T0001569.1 MGP_LPJ_G0001483.1 mouse_genomes_project 5 43799557 43802812 - TEC TEC MGP_LPJ_T0074985.1 MGP_LPJ_G0030133.1 mouse_genomes_project 5 142736015 142753583 + MGP_LPJ_P0074985 protein_coding unknown_likely_coding MGP_LPJ_T0074986.1 MGP_LPJ_G0030133.1 mouse_genomes_project 5 142743995 142745824 + MGP_LPJ_P0074986 protein_coding protein_coding MGP_LPJ_T0075724.1 MGP_LPJ_G0030295.1 mouse_genomes_project 5 153791740 153915904 + MGP_LPJ_P0075724 Pan3 protein_coding protein_coding MGP_LPJ_T0075725.1 MGP_LPJ_G0030295.1 mouse_genomes_project 5 153792032 153915898 + MGP_LPJ_P0075725 Pan3 protein_coding protein_coding MGP_LPJ_T0075726.1 MGP_LPJ_G0030295.1 mouse_genomes_project 5 153792159 153869774 + MGP_LPJ_P0075726 Pan3 protein_coding unknown_likely_coding MGP_LPJ_T0075727.1 MGP_LPJ_G0030295.1 mouse_genomes_project 5 153792475 153818301 + Pan3 protein_coding retained_intron MGP_LPJ_T0075728.1 MGP_LPJ_G0030295.1 mouse_genomes_project 5 153792475 153816696 + Pan3 protein_coding processed_transcript MGP_LPJ_T0075729.1 MGP_LPJ_G0030295.1 mouse_genomes_project 5 153792475 153894502 + MGP_LPJ_P0075729 Pan3 protein_coding nonsense_mediated_decay MGP_LPJ_T0075730.1 MGP_LPJ_G0030295.1 mouse_genomes_project 5 153813406 153853470 + Pan3 protein_coding retained_intron MGP_LPJ_T0075731.1 MGP_LPJ_G0030295.1 mouse_genomes_project 5 153813410 153913351 + MGP_LPJ_P0075731 Pan3 protein_coding protein_coding MGP_LPJ_T0075732.1 MGP_LPJ_G0030295.1 mouse_genomes_project 5 153813410 153913351 + MGP_LPJ_P0075732 Pan3 protein_coding nonsense_mediated_decay MGP_LPJ_T0075733.1 MGP_LPJ_G0030295.1 mouse_genomes_project 5 153813490 153894127 + MGP_LPJ_P0075733 Pan3 protein_coding protein_coding MGP_LPJ_T0075734.1 MGP_LPJ_G0030295.1 mouse_genomes_project 5 153814773 153817074 + Pan3 protein_coding retained_intron MGP_LPJ_T0075735.1 MGP_LPJ_G0030295.1 mouse_genomes_project 5 153816222 153857727 + Pan3 protein_coding processed_transcript MGP_LPJ_T0075736.1 MGP_LPJ_G0030295.1 mouse_genomes_project 5 153816253 153915898 + MGP_LPJ_P0075736 Pan3 protein_coding nonsense_mediated_decay MGP_LPJ_T0075737.1 MGP_LPJ_G0030295.1 mouse_genomes_project 5 153884138 153887893 + Pan3 protein_coding retained_intron MGP_LPJ_T0075738.1 MGP_LPJ_G0030295.1 mouse_genomes_project 5 153885922 153894157 + Pan3 protein_coding retained_intron MGP_LPJ_T0075739.1 MGP_LPJ_G0030295.1 mouse_genomes_project 5 153886323 153915898 + MGP_LPJ_P0075739 Pan3 protein_coding protein_coding MGP_LPJ_T0075740.1 MGP_LPJ_G0030295.1 mouse_genomes_project 5 153893569 153894483 + Pan3 protein_coding retained_intron MGP_LPJ_T0075741.1 MGP_LPJ_G0030295.1 mouse_genomes_project 5 153897232 153915890 + Pan3 protein_coding retained_intron MGP_LPJ_T0075742.1 MGP_LPJ_G0030295.1 mouse_genomes_project 5 153897437 153899205 + Pan3 protein_coding retained_intron MGP_LPJ_T0075743.1 MGP_LPJ_G0030295.1 mouse_genomes_project 5 153897513 153900813 + Pan3 protein_coding processed_transcript MGP_LPJ_T0075744.1 MGP_LPJ_G0030295.1 mouse_genomes_project 5 153898860 153900759 + Pan3 protein_coding retained_intron MGP_LPJ_T0075745.1 MGP_LPJ_G0030295.1 mouse_genomes_project 5 153903766 153910567 + Pan3 protein_coding retained_intron MGP_LPJ_T0075746.1 MGP_LPJ_G0030295.1 mouse_genomes_project 5 153904658 153913082 + Pan3 protein_coding processed_transcript MGP_LPJ_T0075747.1 MGP_LPJ_G0030295.1 mouse_genomes_project 5 153906719 153915895 + MGP_LPJ_P0075747 Pan3 protein_coding protein_coding MGP_LPJ_T0070510.1 MGP_LPJ_G0029297.1 mouse_genomes_project 5 29290592 29301760 + MGP_LPJ_P0070510 Tmem214 protein_coding protein_coding MGP_LPJ_T0070511.1 MGP_LPJ_G0029297.1 mouse_genomes_project 5 29292211 29299625 + MGP_LPJ_P0070511 Tmem214 protein_coding protein_coding MGP_LPJ_T0070512.1 MGP_LPJ_G0029297.1 mouse_genomes_project 5 29292213 29300945 + Tmem214 protein_coding retained_intron MGP_LPJ_T0070513.1 MGP_LPJ_G0029297.1 mouse_genomes_project 5 29292215 29300049 + Tmem214 protein_coding retained_intron MGP_LPJ_T0070514.1 MGP_LPJ_G0029297.1 mouse_genomes_project 5 29292944 29294066 + Tmem214 protein_coding retained_intron MGP_LPJ_T0070515.1 MGP_LPJ_G0029297.1 mouse_genomes_project 5 29294353 29296175 + Tmem214 protein_coding processed_transcript MGP_LPJ_T0070516.1 MGP_LPJ_G0029297.1 mouse_genomes_project 5 29294398 29300044 + Tmem214 protein_coding retained_intron MGP_LPJ_T0001876.1 MGP_LPJ_G0001787.1 mouse_genomes_project 5 135763697 135765332 - TEC TEC MGP_LPJ_T0001555.1 MGP_LPJ_G0001469.1 mouse_genomes_project 5 42843596 42844959 - TEC TEC MGP_LPJ_T0008285.1 MGP_LPJ_G0006747.1 mouse_genomes_project 5 113264177 113274922 + Gm26718 lincRNA lincRNA MGP_LPJ_T0015046.1 MGP_LPJ_G0013137.1 mouse_genomes_project 5 106870613 106870814 - processed_pseudogene processed_pseudogene MGP_LPJ_T0074805.1 MGP_LPJ_G0030100.1 mouse_genomes_project 5 141030237 141071221 + MGP_LPJ_P0074805 Dtx2 protein_coding protein_coding MGP_LPJ_T0074806.1 MGP_LPJ_G0030100.1 mouse_genomes_project 5 141030248 141071213 + MGP_LPJ_P0074806 Dtx2 protein_coding protein_coding MGP_LPJ_T0074807.1 MGP_LPJ_G0030100.1 mouse_genomes_project 5 141030281 141071220 + MGP_LPJ_P0074807 Dtx2 protein_coding protein_coding MGP_LPJ_T0074808.1 MGP_LPJ_G0030100.1 mouse_genomes_project 5 141030284 141049248 + MGP_LPJ_P0074808 Dtx2 protein_coding protein_coding MGP_LPJ_T0074809.1 MGP_LPJ_G0030100.1 mouse_genomes_project 5 141030295 141071215 + MGP_LPJ_P0074809 Dtx2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074810.1 MGP_LPJ_G0030100.1 mouse_genomes_project 5 141030314 141071213 + MGP_LPJ_P0074810 Dtx2 protein_coding protein_coding MGP_LPJ_T0074811.1 MGP_LPJ_G0030100.1 mouse_genomes_project 5 141030319 141047039 + MGP_LPJ_P0074811 Dtx2 protein_coding protein_coding MGP_LPJ_T0074812.1 MGP_LPJ_G0030100.1 mouse_genomes_project 5 141030543 141031844 + Dtx2 protein_coding processed_transcript MGP_LPJ_T0074813.1 MGP_LPJ_G0030100.1 mouse_genomes_project 5 141056674 141071213 + Dtx2 protein_coding retained_intron MGP_LPJ_T0070218.1 MGP_LPJ_G0029238.1 mouse_genomes_project 5 22505607 22513568 - MGP_LPJ_P0070218 Atg9b protein_coding protein_coding MGP_LPJ_T0070219.1 MGP_LPJ_G0029238.1 mouse_genomes_project 5 22506047 22512061 - Atg9b protein_coding processed_transcript MGP_LPJ_T0070220.1 MGP_LPJ_G0029238.1 mouse_genomes_project 5 22508532 22509394 - Atg9b protein_coding processed_transcript MGP_LPJ_T0008146.1 MGP_LPJ_G0006640.1 mouse_genomes_project 5 51624160 51640578 - C130083M11Rik lincRNA lincRNA MGP_LPJ_T0074146.1 MGP_LPJ_G0029982.1 mouse_genomes_project 5 128173104 128175032 - MGP_LPJ_P0074146 Hcar2 protein_coding protein_coding MGP_LPJ_T0072932.1 MGP_LPJ_G0029757.1 mouse_genomes_project 5 111156872 111185837 + MGP_LPJ_P0072932 Pcgf3 protein_coding protein_coding MGP_LPJ_T0072933.1 MGP_LPJ_G0029757.1 mouse_genomes_project 5 111156872 111205448 + MGP_LPJ_P0072933 Pcgf3 protein_coding protein_coding MGP_LPJ_T0072934.1 MGP_LPJ_G0029757.1 mouse_genomes_project 5 111156953 111182360 + MGP_LPJ_P0072934 Pcgf3 protein_coding nonsense_mediated_decay MGP_LPJ_T0072935.1 MGP_LPJ_G0029757.1 mouse_genomes_project 5 111169482 111174100 + Pcgf3 protein_coding retained_intron MGP_LPJ_T0072936.1 MGP_LPJ_G0029757.1 mouse_genomes_project 5 111182408 111194913 + Pcgf3 protein_coding retained_intron MGP_LPJ_T0014922.1 MGP_LPJ_G0013013.1 mouse_genomes_project 5 48855301 48856412 + processed_pseudogene processed_pseudogene MGP_LPJ_T0075465.1 MGP_LPJ_G0030232.1 mouse_genomes_project 5 149244076 149256843 - MGP_LPJ_P0075465 Zdhhc4 protein_coding protein_coding MGP_LPJ_T0075466.1 MGP_LPJ_G0030232.1 mouse_genomes_project 5 149244077 149256807 - MGP_LPJ_P0075466 Zdhhc4 protein_coding nonsense_mediated_decay MGP_LPJ_T0075467.1 MGP_LPJ_G0030232.1 mouse_genomes_project 5 149244084 149253941 - MGP_LPJ_P0075467 Zdhhc4 protein_coding protein_coding MGP_LPJ_T0075468.1 MGP_LPJ_G0030232.1 mouse_genomes_project 5 149247972 149256798 - Zdhhc4 protein_coding processed_transcript MGP_LPJ_T0075469.1 MGP_LPJ_G0030232.1 mouse_genomes_project 5 149248027 149256810 - MGP_LPJ_P0075469 Zdhhc4 protein_coding protein_coding MGP_LPJ_T0075470.1 MGP_LPJ_G0030232.1 mouse_genomes_project 5 149248033 149256801 - MGP_LPJ_P0075470 Zdhhc4 protein_coding protein_coding MGP_LPJ_T0075471.1 MGP_LPJ_G0030232.1 mouse_genomes_project 5 149251719 149256816 - MGP_LPJ_P0075471 Zdhhc4 protein_coding protein_coding MGP_LPJ_T0075472.1 MGP_LPJ_G0030232.1 mouse_genomes_project 5 149251806 149256816 - Zdhhc4 protein_coding processed_transcript MGP_LPJ_T0075473.1 MGP_LPJ_G0030232.1 mouse_genomes_project 5 149251821 149256815 - MGP_LPJ_P0075473 Zdhhc4 protein_coding protein_coding MGP_LPJ_T0075474.1 MGP_LPJ_G0030232.1 mouse_genomes_project 5 149251919 149256156 - Zdhhc4 protein_coding retained_intron MGP_LPJ_T0075475.1 MGP_LPJ_G0030232.1 mouse_genomes_project 5 149253579 149256776 - Zdhhc4 protein_coding processed_transcript MGP_LPJ_T0075476.1 MGP_LPJ_G0030232.1 mouse_genomes_project 5 149253642 149256779 - Zdhhc4 protein_coding processed_transcript MGP_LPJ_T0075477.1 MGP_LPJ_G0030232.1 mouse_genomes_project 5 149255881 149256789 - Zdhhc4 protein_coding processed_transcript MGP_LPJ_T0070038.1 MGP_LPJ_G0029203.1 mouse_genomes_project 5 14348855 14372101 + Hgf protein_coding retained_intron MGP_LPJ_T0070039.1 MGP_LPJ_G0029203.1 mouse_genomes_project 5 14348910 14420181 + MGP_LPJ_P0070039 Hgf protein_coding protein_coding MGP_LPJ_T0070040.1 MGP_LPJ_G0029203.1 mouse_genomes_project 5 14348939 14367656 + Hgf protein_coding retained_intron MGP_LPJ_T0070041.1 MGP_LPJ_G0029203.1 mouse_genomes_project 5 14349113 14368229 + Hgf protein_coding retained_intron MGP_LPJ_T0070042.1 MGP_LPJ_G0029203.1 mouse_genomes_project 5 14349148 14419335 + MGP_LPJ_P0070042 Hgf protein_coding protein_coding MGP_LPJ_T0070043.1 MGP_LPJ_G0029203.1 mouse_genomes_project 5 14349290 14419039 + MGP_LPJ_P0070043 Hgf protein_coding protein_coding MGP_LPJ_T0004862.1 MGP_LPJ_G0004184.1 mouse_genomes_project 5 129131586 129132098 - Gm43777 antisense antisense MGP_LPJ_T0070709.1 MGP_LPJ_G0029325.1 mouse_genomes_project 5 29923905 29939866 + MGP_LPJ_P0070709 Zfp512 protein_coding protein_coding MGP_LPJ_T0070710.1 MGP_LPJ_G0029325.1 mouse_genomes_project 5 29923924 29946665 + MGP_LPJ_P0070710 Zfp512 protein_coding protein_coding MGP_LPJ_T0070711.1 MGP_LPJ_G0029325.1 mouse_genomes_project 5 29924022 29954969 + MGP_LPJ_P0070711 Zfp512 protein_coding protein_coding MGP_LPJ_T0070712.1 MGP_LPJ_G0029325.1 mouse_genomes_project 5 29938500 29946052 + MGP_LPJ_P0070712 Zfp512 protein_coding protein_coding MGP_LPJ_T0074499.1 MGP_LPJ_G0030047.1 mouse_genomes_project 5 134884347 134894977 - MGP_LPJ_P0074499 Sbds protein_coding protein_coding MGP_LPJ_T0074500.1 MGP_LPJ_G0030047.1 mouse_genomes_project 5 134885021 134894852 - MGP_LPJ_P0074500 Sbds protein_coding nonsense_mediated_decay MGP_LPJ_T0074501.1 MGP_LPJ_G0030047.1 mouse_genomes_project 5 134886500 134893534 - MGP_LPJ_P0074501 Sbds protein_coding protein_coding MGP_LPJ_T0074502.1 MGP_LPJ_G0030047.1 mouse_genomes_project 5 134887047 134894939 - Sbds protein_coding processed_transcript MGP_LPJ_T0074503.1 MGP_LPJ_G0030047.1 mouse_genomes_project 5 134890299 134894925 - Sbds protein_coding processed_transcript MGP_LPJ_T0073970.1 MGP_LPJ_G0029959.1 mouse_genomes_project 5 126920839 126946050 - MGP_LPJ_P0073970 Camkk2 protein_coding protein_coding MGP_LPJ_T0073971.1 MGP_LPJ_G0029959.1 mouse_genomes_project 5 126925226 126935493 - MGP_LPJ_P0073971 Camkk2 protein_coding protein_coding MGP_LPJ_T0073972.1 MGP_LPJ_G0029959.1 mouse_genomes_project 5 126925473 126977336 - MGP_LPJ_P0073972 Camkk2 protein_coding protein_coding MGP_LPJ_T0073973.1 MGP_LPJ_G0029959.1 mouse_genomes_project 5 126932019 126977404 - Camkk2 protein_coding retained_intron MGP_LPJ_T0073974.1 MGP_LPJ_G0029959.1 mouse_genomes_project 5 126937843 126959565 - MGP_LPJ_P0073974 Camkk2 protein_coding nonsense_mediated_decay MGP_LPJ_T0073975.1 MGP_LPJ_G0029959.1 mouse_genomes_project 5 126939431 126977340 - Camkk2 protein_coding processed_transcript MGP_LPJ_T0073976.1 MGP_LPJ_G0029959.1 mouse_genomes_project 5 126946015 126977286 - MGP_LPJ_P0073976 Camkk2 protein_coding protein_coding MGP_LPJ_T0073977.1 MGP_LPJ_G0029959.1 mouse_genomes_project 5 126951975 126977330 - MGP_LPJ_P0073977 Camkk2 protein_coding protein_coding MGP_LPJ_T0073978.1 MGP_LPJ_G0029959.1 mouse_genomes_project 5 126953242 126977414 - Camkk2 protein_coding retained_intron MGP_LPJ_T0073979.1 MGP_LPJ_G0029959.1 mouse_genomes_project 5 126959705 126977320 - MGP_LPJ_P0073979 Camkk2 protein_coding protein_coding MGP_LPJ_T0001699.1 MGP_LPJ_G0001612.1 mouse_genomes_project 5 69474749 69476326 - TEC TEC MGP_LPJ_T0070173.1 MGP_LPJ_G0029229.1 mouse_genomes_project 5 21538273 21653083 - MGP_LPJ_P0070173 Srpk2 protein_coding protein_coding MGP_LPJ_T0070174.1 MGP_LPJ_G0029229.1 mouse_genomes_project 5 21540443 21721501 - MGP_LPJ_P0070174 Srpk2 protein_coding nonsense_mediated_decay MGP_LPJ_T0070175.1 MGP_LPJ_G0029229.1 mouse_genomes_project 5 21562068 21580005 - Srpk2 protein_coding processed_transcript MGP_LPJ_T0070176.1 MGP_LPJ_G0029229.1 mouse_genomes_project 5 21564278 21721067 - MGP_LPJ_P0070176 Srpk2 protein_coding protein_coding MGP_LPJ_T0070177.1 MGP_LPJ_G0029229.1 mouse_genomes_project 5 21583945 21721020 - Srpk2 protein_coding retained_intron MGP_LPJ_T0070178.1 MGP_LPJ_G0029229.1 mouse_genomes_project 5 21586389 21588802 - Srpk2 protein_coding retained_intron MGP_LPJ_T0070179.1 MGP_LPJ_G0029229.1 mouse_genomes_project 5 21586785 21731251 - MGP_LPJ_P0070179 Srpk2 protein_coding protein_coding MGP_LPJ_T0070180.1 MGP_LPJ_G0029229.1 mouse_genomes_project 5 21606413 21721408 - MGP_LPJ_P0070180 Srpk2 protein_coding protein_coding MGP_LPJ_T0070181.1 MGP_LPJ_G0029229.1 mouse_genomes_project 5 21606518 21731234 - MGP_LPJ_P0070181 Srpk2 protein_coding protein_coding MGP_LPJ_T0070182.1 MGP_LPJ_G0029229.1 mouse_genomes_project 5 21651270 21653104 - Srpk2 protein_coding retained_intron MGP_LPJ_T0014876.1 MGP_LPJ_G0012967.1 mouse_genomes_project 5 28197091 28197779 - processed_pseudogene processed_pseudogene MGP_LPJ_T0071118.1 MGP_LPJ_G0029387.1 mouse_genomes_project 5 34961473 34964021 + MGP_LPJ_P0071118 Psapl1 protein_coding protein_coding MGP_LPJ_T0014866.1 MGP_LPJ_G0012957.1 mouse_genomes_project 5 24844002 24844114 + processed_pseudogene processed_pseudogene MGP_LPJ_T0073106.1 MGP_LPJ_G0029794.1 mouse_genomes_project 5 113806778 113813086 - MGP_LPJ_P0073106 Pus1 protein_coding protein_coding MGP_LPJ_T0073107.1 MGP_LPJ_G0029794.1 mouse_genomes_project 5 113806778 113813778 - MGP_LPJ_P0073107 Pus1 protein_coding protein_coding MGP_LPJ_T0073108.1 MGP_LPJ_G0029794.1 mouse_genomes_project 5 113806778 113813715 - MGP_LPJ_P0073108 Pus1 protein_coding protein_coding MGP_LPJ_T0073109.1 MGP_LPJ_G0029794.1 mouse_genomes_project 5 113806778 113813715 - MGP_LPJ_P0073109 Pus1 protein_coding protein_coding MGP_LPJ_T0073110.1 MGP_LPJ_G0029794.1 mouse_genomes_project 5 113806779 113813734 - MGP_LPJ_P0073110 Pus1 protein_coding protein_coding MGP_LPJ_T0073111.1 MGP_LPJ_G0029794.1 mouse_genomes_project 5 113808623 113813265 - MGP_LPJ_P0073111 Pus1 protein_coding protein_coding MGP_LPJ_T0073112.1 MGP_LPJ_G0029794.1 mouse_genomes_project 5 113808632 113813710 - MGP_LPJ_P0073112 Pus1 protein_coding protein_coding MGP_LPJ_T0001639.1 MGP_LPJ_G0001553.1 mouse_genomes_project 5 57619860 57621327 + TEC TEC MGP_LPJ_T0099577.1 MGP_LPJ_G0037840.1 mouse_genomes_project 5 66373335 66373442 - Gm22929 snRNA snRNA MGP_LPJ_T0073758.1 MGP_LPJ_G0029926.1 mouse_genomes_project 5 125207153 125368305 + MGP_LPJ_P0073758 Gm15800 protein_coding protein_coding MGP_LPJ_T0073759.1 MGP_LPJ_G0029926.1 mouse_genomes_project 5 125283390 125302807 + MGP_LPJ_P0073759 Gm15800 protein_coding protein_coding MGP_LPJ_T0073760.1 MGP_LPJ_G0029926.1 mouse_genomes_project 5 125283993 125303390 + Gm15800 protein_coding retained_intron MGP_LPJ_T0073761.1 MGP_LPJ_G0029926.1 mouse_genomes_project 5 125289636 125297805 + MGP_LPJ_P0073761 Gm15800 protein_coding protein_coding MGP_LPJ_T0073762.1 MGP_LPJ_G0029926.1 mouse_genomes_project 5 125304086 125323172 + MGP_LPJ_P0073762 Gm15800 protein_coding protein_coding MGP_LPJ_T0073763.1 MGP_LPJ_G0029926.1 mouse_genomes_project 5 125314111 125317013 + Gm15800 protein_coding processed_transcript MGP_LPJ_T0073764.1 MGP_LPJ_G0029926.1 mouse_genomes_project 5 125318372 125321128 + Gm15800 protein_coding processed_transcript MGP_LPJ_T0001774.1 MGP_LPJ_G0001686.1 mouse_genomes_project 5 109737173 109740743 - TEC TEC MGP_LPJ_T0072344.1 MGP_LPJ_G0029624.1 mouse_genomes_project 5 91979172 92008071 + MGP_LPJ_P0072344 Afm protein_coding protein_coding MGP_LPJ_T0072345.1 MGP_LPJ_G0029624.1 mouse_genomes_project 5 91979189 92003581 + MGP_LPJ_P0072345 Afm protein_coding protein_coding MGP_LPJ_T0004775.1 MGP_LPJ_G0004126.1 mouse_genomes_project 5 102967495 102973863 - 4930458D05Rik antisense antisense MGP_LPJ_T0074070.1 MGP_LPJ_G0029972.1 mouse_genomes_project 5 127661450 127721380 + MGP_LPJ_P0074070 Mlxip protein_coding protein_coding MGP_LPJ_T0074071.1 MGP_LPJ_G0029972.1 mouse_genomes_project 5 127661452 127733618 + MGP_LPJ_P0074071 Mlxip protein_coding protein_coding MGP_LPJ_T0074072.1 MGP_LPJ_G0029972.1 mouse_genomes_project 5 127719104 127733615 + MGP_LPJ_P0074072 Mlxip protein_coding nonsense_mediated_decay MGP_LPJ_T0074073.1 MGP_LPJ_G0029972.1 mouse_genomes_project 5 127727145 127729235 + Mlxip protein_coding processed_transcript MGP_LPJ_T0075658.1 MGP_LPJ_G0030274.1 mouse_genomes_project 5 151510516 151550173 - MGP_LPJ_P0075658 protein_coding protein_coding MGP_LPJ_T0008149.1 MGP_LPJ_G0006643.1 mouse_genomes_project 5 52465536 52480278 + Gm42746 lincRNA lincRNA MGP_LPJ_T0069896.1 MGP_LPJ_G0029180.1 mouse_genomes_project 5 2743974 2760204 - MGP_LPJ_P0069896 Steap1 protein_coding protein_coding MGP_LPJ_T0069897.1 MGP_LPJ_G0029180.1 mouse_genomes_project 5 2743982 2748055 - MGP_LPJ_P0069897 Steap1 protein_coding protein_coding MGP_LPJ_T0075348.1 MGP_LPJ_G0030207.1 mouse_genomes_project 5 146380687 146426163 - MGP_LPJ_P0075348 Iqce protein_coding protein_coding MGP_LPJ_T0075349.1 MGP_LPJ_G0030207.1 mouse_genomes_project 5 146382365 146385102 - Iqce protein_coding retained_intron MGP_LPJ_T0075350.1 MGP_LPJ_G0030207.1 mouse_genomes_project 5 146382365 146426050 - Iqce protein_coding retained_intron MGP_LPJ_T0075351.1 MGP_LPJ_G0030207.1 mouse_genomes_project 5 146384140 146426124 - MGP_LPJ_P0075351 Iqce protein_coding protein_coding MGP_LPJ_T0075352.1 MGP_LPJ_G0030207.1 mouse_genomes_project 5 146384889 146404099 - MGP_LPJ_P0075352 Iqce protein_coding protein_coding MGP_LPJ_T0075353.1 MGP_LPJ_G0030207.1 mouse_genomes_project 5 146385018 146388220 - Iqce protein_coding retained_intron MGP_LPJ_T0075354.1 MGP_LPJ_G0030207.1 mouse_genomes_project 5 146401836 146413211 - Iqce protein_coding retained_intron MGP_LPJ_T0075355.1 MGP_LPJ_G0030207.1 mouse_genomes_project 5 146404413 146426061 - Iqce protein_coding retained_intron MGP_LPJ_T0075356.1 MGP_LPJ_G0030207.1 mouse_genomes_project 5 146413207 146425754 - Iqce protein_coding processed_transcript MGP_LPJ_T0075357.1 MGP_LPJ_G0030207.1 mouse_genomes_project 5 146413212 146426163 - MGP_LPJ_P0075357 Iqce protein_coding protein_coding MGP_LPJ_T0075358.1 MGP_LPJ_G0030207.1 mouse_genomes_project 5 146416921 146426085 - MGP_LPJ_P0075358 Iqce protein_coding protein_coding MGP_LPJ_T0075359.1 MGP_LPJ_G0030207.1 mouse_genomes_project 5 146417319 146426079 - Iqce protein_coding retained_intron MGP_LPJ_T0011610.1 MGP_LPJ_G0009728.1 mouse_genomes_project 5 91098999 91099323 + Gm25320 misc_RNA misc_RNA MGP_LPJ_T0072999.1 MGP_LPJ_G0029775.1 mouse_genomes_project 5 112384799 112388898 - MGP_LPJ_P0072999 Crlf2 protein_coding protein_coding MGP_LPJ_T0073000.1 MGP_LPJ_G0029775.1 mouse_genomes_project 5 112384803 112388949 - MGP_LPJ_P0073000 Crlf2 protein_coding protein_coding MGP_LPJ_T0073001.1 MGP_LPJ_G0029775.1 mouse_genomes_project 5 112384805 112386457 - MGP_LPJ_P0073001 Crlf2 protein_coding protein_coding MGP_LPJ_T0004816.1 MGP_LPJ_G0004153.1 mouse_genomes_project 5 119501618 119508122 + Gm14508 antisense antisense MGP_LPJ_T0010697.1 MGP_LPJ_G0008815.1 mouse_genomes_project 5 35060640 35060699 + Mir7689 miRNA miRNA MGP_LPJ_T0071146.1 MGP_LPJ_G0029392.1 mouse_genomes_project 5 35402476 35471978 - MGP_LPJ_P0071146 D5Ertd579e protein_coding protein_coding MGP_LPJ_T0071147.1 MGP_LPJ_G0029392.1 mouse_genomes_project 5 35404241 35415722 - MGP_LPJ_P0071147 D5Ertd579e protein_coding protein_coding MGP_LPJ_T0071148.1 MGP_LPJ_G0029392.1 mouse_genomes_project 5 35417947 35423247 - D5Ertd579e protein_coding processed_transcript MGP_LPJ_T0071149.1 MGP_LPJ_G0029392.1 mouse_genomes_project 5 35429096 35471978 - D5Ertd579e protein_coding retained_intron MGP_LPJ_T0071150.1 MGP_LPJ_G0029392.1 mouse_genomes_project 5 35444652 35472065 - MGP_LPJ_P0071150 D5Ertd579e protein_coding protein_coding MGP_LPJ_T0071151.1 MGP_LPJ_G0029392.1 mouse_genomes_project 5 35465051 35472011 - D5Ertd579e protein_coding retained_intron MGP_LPJ_T0001688.1 MGP_LPJ_G0001601.1 mouse_genomes_project 5 67231825 67233982 + TEC TEC MGP_LPJ_T0071534.1 MGP_LPJ_G0029460.1 mouse_genomes_project 5 62588917 62598835 - protein_coding retained_intron MGP_LPJ_T0071535.1 MGP_LPJ_G0029460.1 mouse_genomes_project 5 62590742 62741092 - MGP_LPJ_P0071535 protein_coding unknown_likely_coding MGP_LPJ_T0071536.1 MGP_LPJ_G0029460.1 mouse_genomes_project 5 62623975 62627619 - protein_coding retained_intron MGP_LPJ_T0071537.1 MGP_LPJ_G0029460.1 mouse_genomes_project 5 62630914 62634949 - protein_coding retained_intron MGP_LPJ_T0071538.1 MGP_LPJ_G0029460.1 mouse_genomes_project 5 62667838 62674015 - protein_coding retained_intron MGP_LPJ_T0071539.1 MGP_LPJ_G0029460.1 mouse_genomes_project 5 62740176 62758166 - MGP_LPJ_P0071539 protein_coding protein_coding MGP_LPJ_T0014902.1 MGP_LPJ_G0012993.1 mouse_genomes_project 5 37379136 37379340 + processed_pseudogene processed_pseudogene MGP_LPJ_T0073675.1 MGP_LPJ_G0029903.1 mouse_genomes_project 5 124281117 124296759 - MGP_LPJ_P0073675 Sdsl protein_coding protein_coding MGP_LPJ_T0073676.1 MGP_LPJ_G0029903.1 mouse_genomes_project 5 124281133 124296806 - MGP_LPJ_P0073676 Sdsl protein_coding protein_coding MGP_LPJ_T0073677.1 MGP_LPJ_G0029903.1 mouse_genomes_project 5 124284698 124291363 - MGP_LPJ_P0073677 Sdsl protein_coding protein_coding MGP_LPJ_T0001765.1 MGP_LPJ_G0001677.1 mouse_genomes_project 5 105542102 105543238 + TEC TEC MGP_LPJ_T0001806.1 MGP_LPJ_G0001718.1 mouse_genomes_project 5 119388095 119389958 + TEC TEC MGP_LPJ_T0071016.1 MGP_LPJ_G0029371.1 mouse_genomes_project 5 33430402 33495474 + Htt protein_coding retained_intron MGP_LPJ_T0071017.1 MGP_LPJ_G0029371.1 mouse_genomes_project 5 33430406 33587880 + MGP_LPJ_P0071017 Htt protein_coding protein_coding MGP_LPJ_T0071018.1 MGP_LPJ_G0029371.1 mouse_genomes_project 5 33430423 33486653 + Htt protein_coding retained_intron MGP_LPJ_T0071019.1 MGP_LPJ_G0029371.1 mouse_genomes_project 5 33465398 33468012 + Htt protein_coding retained_intron MGP_LPJ_T0071020.1 MGP_LPJ_G0029371.1 mouse_genomes_project 5 33476687 33482913 + Htt protein_coding retained_intron MGP_LPJ_T0071021.1 MGP_LPJ_G0029371.1 mouse_genomes_project 5 33481128 33483399 + Htt protein_coding retained_intron MGP_LPJ_T0071022.1 MGP_LPJ_G0029371.1 mouse_genomes_project 5 33547370 33555157 + Htt protein_coding retained_intron MGP_LPJ_T0071023.1 MGP_LPJ_G0029371.1 mouse_genomes_project 5 33556629 33576537 + Htt protein_coding retained_intron MGP_LPJ_T0073244.1 MGP_LPJ_G0029823.1 mouse_genomes_project 5 116982654 116987450 + MGP_LPJ_P0073244 Ficd protein_coding protein_coding MGP_LPJ_T0008233.1 MGP_LPJ_G0006711.1 mouse_genomes_project 5 101030964 101170811 - Gm43251 lincRNA lincRNA MGP_LPJ_T0001871.1 MGP_LPJ_G0001782.1 mouse_genomes_project 5 134864307 134865769 + TEC TEC MGP_LPJ_T0071470.1 MGP_LPJ_G0029449.1 mouse_genomes_project 5 52243291 52292788 + Zcchc4 protein_coding processed_transcript MGP_LPJ_T0071471.1 MGP_LPJ_G0029449.1 mouse_genomes_project 5 52250920 52292531 + MGP_LPJ_P0071471 Zcchc4 protein_coding protein_coding MGP_LPJ_T0071472.1 MGP_LPJ_G0029449.1 mouse_genomes_project 5 52250920 52293625 + MGP_LPJ_P0071472 Zcchc4 protein_coding protein_coding MGP_LPJ_T0071473.1 MGP_LPJ_G0029449.1 mouse_genomes_project 5 52250952 52268037 + Zcchc4 protein_coding retained_intron MGP_LPJ_T0071474.1 MGP_LPJ_G0029449.1 mouse_genomes_project 5 52250982 52263968 + MGP_LPJ_P0071474 Zcchc4 protein_coding protein_coding MGP_LPJ_T0071475.1 MGP_LPJ_G0029449.1 mouse_genomes_project 5 52250988 52264000 + Zcchc4 protein_coding processed_transcript MGP_LPJ_T0071476.1 MGP_LPJ_G0029449.1 mouse_genomes_project 5 52265898 52288144 + Zcchc4 protein_coding processed_transcript MGP_LPJ_T0071477.1 MGP_LPJ_G0029449.1 mouse_genomes_project 5 52272641 52284842 + Zcchc4 protein_coding retained_intron MGP_LPJ_T0071425.1 MGP_LPJ_G0029440.1 mouse_genomes_project 5 47657035 48031072 - Kcnip4 protein_coding processed_transcript MGP_LPJ_T0071426.1 MGP_LPJ_G0029440.1 mouse_genomes_project 5 47657035 48172653 - MGP_LPJ_P0071426 Kcnip4 protein_coding protein_coding MGP_LPJ_T0071427.1 MGP_LPJ_G0029440.1 mouse_genomes_project 5 47657035 47871354 - MGP_LPJ_P0071427 Kcnip4 protein_coding protein_coding MGP_LPJ_T0071428.1 MGP_LPJ_G0029440.1 mouse_genomes_project 5 47657035 48833986 - MGP_LPJ_P0071428 Kcnip4 protein_coding protein_coding MGP_LPJ_T0071429.1 MGP_LPJ_G0029440.1 mouse_genomes_project 5 47657036 47760325 - Kcnip4 protein_coding processed_transcript MGP_LPJ_T0071430.1 MGP_LPJ_G0029440.1 mouse_genomes_project 5 47657040 48833843 - MGP_LPJ_P0071430 Kcnip4 protein_coding protein_coding MGP_LPJ_T0071431.1 MGP_LPJ_G0029440.1 mouse_genomes_project 5 47657045 48579847 - MGP_LPJ_P0071431 Kcnip4 protein_coding protein_coding MGP_LPJ_T0071434.1 MGP_LPJ_G0029440.1 mouse_genomes_project 5 47663567 48031072 - Kcnip4 protein_coding processed_transcript MGP_LPJ_T0008148.1 MGP_LPJ_G0006642.1 mouse_genomes_project 5 52052078 52065703 - 8030423F21Rik lincRNA lincRNA MGP_LPJ_T0074090.1 MGP_LPJ_G0029977.1 mouse_genomes_project 5 127810810 127850426 - MGP_LPJ_P0074090 Vps33a protein_coding protein_coding MGP_LPJ_T0074091.1 MGP_LPJ_G0029977.1 mouse_genomes_project 5 127825283 127829841 - Vps33a protein_coding retained_intron MGP_LPJ_T0074092.1 MGP_LPJ_G0029977.1 mouse_genomes_project 5 127834371 127839954 - Vps33a protein_coding retained_intron MGP_LPJ_T0074093.1 MGP_LPJ_G0029977.1 mouse_genomes_project 5 127836073 127850367 - MGP_LPJ_P0074093 Vps33a protein_coding nonsense_mediated_decay MGP_LPJ_T0015012.1 MGP_LPJ_G0013103.1 mouse_genomes_project 5 89561490 89561845 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102196.1 MGP_LPJ_G0040233.1 mouse_genomes_project 5 146143926 146170605 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0014937.1 MGP_LPJ_G0013028.1 mouse_genomes_project 5 56909661 56910397 + processed_pseudogene processed_pseudogene MGP_LPJ_T0072388.1 MGP_LPJ_G0029641.1 mouse_genomes_project 5 93505133 93508926 + Gm1045 protein_coding retained_intron MGP_LPJ_T0072389.1 MGP_LPJ_G0029641.1 mouse_genomes_project 5 93505133 93514559 + MGP_LPJ_P0072389 Gm1045 protein_coding protein_coding MGP_LPJ_T0010715.1 MGP_LPJ_G0008833.1 mouse_genomes_project 5 92268730 92268800 - Gm24322 miRNA miRNA MGP_LPJ_T0004839.1 MGP_LPJ_G0004168.1 mouse_genomes_project 5 125383594 125392871 + Gm42917 antisense antisense MGP_LPJ_T0070135.1 MGP_LPJ_G0029223.1 mouse_genomes_project 5 19768298 19786453 + MGP_LPJ_P0070135 Psmc2 protein_coding protein_coding MGP_LPJ_T0015079.1 MGP_LPJ_G0013170.1 mouse_genomes_project 5 113907743 113908414 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001593.1 MGP_LPJ_G0001507.1 mouse_genomes_project 5 48209576 48216252 - TEC TEC MGP_LPJ_T0004898.1 MGP_LPJ_G0004211.1 mouse_genomes_project 5 145729015 145740428 + Gm16122 antisense antisense MGP_LPJ_T0072585.1 MGP_LPJ_G0029682.1 mouse_genomes_project 5 102028780 102029383 + MGP_LPJ_P0072585 4930524J08Rik protein_coding protein_coding MGP_LPJ_T0001541.1 MGP_LPJ_G0001455.1 mouse_genomes_project 5 34273240 34275945 - TEC TEC MGP_LPJ_T0004751.1 MGP_LPJ_G0004111.1 mouse_genomes_project 5 89213756 89217219 - Gm42794 antisense antisense MGP_LPJ_T0008212.1 MGP_LPJ_G0006693.1 mouse_genomes_project 5 92292028 92295652 + Gm43086 lincRNA lincRNA MGP_LPJ_T0069757.1 MGP_LPJ_G0029160.1 mouse_genomes_project 5 397549 423955 + MGP_LPJ_P0069757 Fam133b protein_coding protein_coding MGP_LPJ_T0069758.1 MGP_LPJ_G0029160.1 mouse_genomes_project 5 397552 414764 + Fam133b protein_coding retained_intron MGP_LPJ_T0069759.1 MGP_LPJ_G0029160.1 mouse_genomes_project 5 397554 423457 + MGP_LPJ_P0069759 Fam133b protein_coding nonsense_mediated_decay MGP_LPJ_T0069760.1 MGP_LPJ_G0029160.1 mouse_genomes_project 5 397554 423457 + MGP_LPJ_P0069760 Fam133b protein_coding protein_coding MGP_LPJ_T0069761.1 MGP_LPJ_G0029160.1 mouse_genomes_project 5 397560 423530 + Fam133b protein_coding retained_intron MGP_LPJ_T0069762.1 MGP_LPJ_G0029160.1 mouse_genomes_project 5 413379 418435 + Fam133b protein_coding retained_intron MGP_LPJ_T0069763.1 MGP_LPJ_G0029160.1 mouse_genomes_project 5 418750 419442 + Fam133b protein_coding retained_intron MGP_LPJ_T0069764.1 MGP_LPJ_G0029160.1 mouse_genomes_project 5 420553 422748 + Fam133b protein_coding retained_intron MGP_LPJ_T0014880.1 MGP_LPJ_G0012971.1 mouse_genomes_project 5 29868588 29869613 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014790.1 MGP_LPJ_G0012881.1 mouse_genomes_project 5 263317 263498 + processed_pseudogene processed_pseudogene MGP_LPJ_T0075549.1 MGP_LPJ_G0030250.1 mouse_genomes_project 5 150131530 150160595 - MGP_LPJ_P0075549 Tecpr1 protein_coding protein_coding MGP_LPJ_T0075550.1 MGP_LPJ_G0030250.1 mouse_genomes_project 5 150132421 150160527 - Tecpr1 protein_coding retained_intron MGP_LPJ_T0075551.1 MGP_LPJ_G0030250.1 mouse_genomes_project 5 150133197 150135245 - Tecpr1 protein_coding retained_intron MGP_LPJ_T0075552.1 MGP_LPJ_G0030250.1 mouse_genomes_project 5 150133202 150136062 - Tecpr1 protein_coding retained_intron MGP_LPJ_T0075553.1 MGP_LPJ_G0030250.1 mouse_genomes_project 5 150135634 150136836 - Tecpr1 protein_coding retained_intron MGP_LPJ_T0075554.1 MGP_LPJ_G0030250.1 mouse_genomes_project 5 150137537 150140629 - Tecpr1 protein_coding retained_intron MGP_LPJ_T0075555.1 MGP_LPJ_G0030250.1 mouse_genomes_project 5 150144751 150145909 - Tecpr1 protein_coding processed_transcript MGP_LPJ_T0075556.1 MGP_LPJ_G0030250.1 mouse_genomes_project 5 150146547 150152623 - Tecpr1 protein_coding retained_intron MGP_LPJ_T0075557.1 MGP_LPJ_G0030250.1 mouse_genomes_project 5 150146569 150160532 - Tecpr1 protein_coding retained_intron MGP_LPJ_T0075558.1 MGP_LPJ_G0030250.1 mouse_genomes_project 5 150149279 150160586 - Tecpr1 protein_coding retained_intron MGP_LPJ_T0075559.1 MGP_LPJ_G0030250.1 mouse_genomes_project 5 150155308 150160538 - Tecpr1 protein_coding retained_intron MGP_LPJ_T0075560.1 MGP_LPJ_G0030250.1 mouse_genomes_project 5 150157371 150160503 - Tecpr1 protein_coding retained_intron MGP_LPJ_T0001528.1 MGP_LPJ_G0001442.1 mouse_genomes_project 5 30986988 30989837 + TEC TEC MGP_LPJ_T0099594.1 MGP_LPJ_G0037857.1 mouse_genomes_project 5 88209807 88209913 - Gm24121 snRNA snRNA MGP_LPJ_T0015065.1 MGP_LPJ_G0013156.1 mouse_genomes_project 5 110823727 110824312 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004693.1 MGP_LPJ_G0004065.1 mouse_genomes_project 5 34446644 34448575 + Gm15650 antisense antisense MGP_LPJ_T0072997.1 MGP_LPJ_G0029773.1 mouse_genomes_project 5 112139737 112169503 + MGP_LPJ_P0072997 Vmn2r16 protein_coding protein_coding MGP_LPJ_T0015143.1 MGP_LPJ_G0013234.1 mouse_genomes_project 5 150359523 150359736 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001532.1 MGP_LPJ_G0001446.1 mouse_genomes_project 5 31354154 31355192 - TEC TEC MGP_LPJ_T0099591.1 MGP_LPJ_G0037854.1 mouse_genomes_project 5 84803398 84803520 - Gm25806 snRNA snRNA MGP_LPJ_T0102197.1 MGP_LPJ_G0040234.1 mouse_genomes_project 5 148414713 148415237 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0070307.1 MGP_LPJ_G0029253.1 mouse_genomes_project 5 22869373 22892600 - MGP_LPJ_P0070307 Wdr86 protein_coding protein_coding MGP_LPJ_T0070308.1 MGP_LPJ_G0029253.1 mouse_genomes_project 5 22869905 22892553 - Wdr86 protein_coding retained_intron MGP_LPJ_T0070309.1 MGP_LPJ_G0029253.1 mouse_genomes_project 5 22869909 22871018 - Wdr86 protein_coding retained_intron MGP_LPJ_T0070310.1 MGP_LPJ_G0029253.1 mouse_genomes_project 5 22870278 22873222 - MGP_LPJ_P0070310 Wdr86 protein_coding protein_coding MGP_LPJ_T0014978.1 MGP_LPJ_G0013069.1 mouse_genomes_project 5 73437210 73437469 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004827.1 MGP_LPJ_G0004162.1 mouse_genomes_project 5 123335522 123340324 - Tbx3os1 antisense antisense MGP_LPJ_T0004828.1 MGP_LPJ_G0004162.1 mouse_genomes_project 5 123335525 123392287 - Tbx3os1 antisense antisense MGP_LPJ_T0004829.1 MGP_LPJ_G0004162.1 mouse_genomes_project 5 123335617 123336144 - Tbx3os1 antisense antisense MGP_LPJ_T0004830.1 MGP_LPJ_G0004162.1 mouse_genomes_project 5 123376574 123392364 - Tbx3os1 antisense antisense MGP_LPJ_T0004831.1 MGP_LPJ_G0004162.1 mouse_genomes_project 5 123377211 123392575 - Tbx3os1 antisense antisense MGP_LPJ_T0004832.1 MGP_LPJ_G0004162.1 mouse_genomes_project 5 123383046 123442841 - Tbx3os1 antisense antisense MGP_LPJ_T0015151.1 MGP_LPJ_G0013242.1 mouse_genomes_project 5 151888460 151888743 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014965.1 MGP_LPJ_G0013056.1 mouse_genomes_project 5 66409585 66413013 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010745.1 MGP_LPJ_G0008863.1 mouse_genomes_project 5 141439560 141439648 - Mir721 miRNA miRNA MGP_LPJ_T0004741.1 MGP_LPJ_G0004103.1 mouse_genomes_project 5 75234918 75263123 + Gm15984 antisense antisense MGP_LPJ_T0004742.1 MGP_LPJ_G0004103.1 mouse_genomes_project 5 75235342 75247054 + Gm15984 antisense antisense MGP_LPJ_T0071478.1 MGP_LPJ_G0029450.1 mouse_genomes_project 5 52301556 52349668 + MGP_LPJ_P0071478 Anapc4 protein_coding protein_coding MGP_LPJ_T0071479.1 MGP_LPJ_G0029450.1 mouse_genomes_project 5 52301670 52348613 + MGP_LPJ_P0071479 Anapc4 protein_coding nonsense_mediated_decay MGP_LPJ_T0071480.1 MGP_LPJ_G0029450.1 mouse_genomes_project 5 52311744 52317651 + Anapc4 protein_coding retained_intron MGP_LPJ_T0071481.1 MGP_LPJ_G0029450.1 mouse_genomes_project 5 52311860 52319550 + MGP_LPJ_P0071481 Anapc4 protein_coding protein_coding MGP_LPJ_T0071482.1 MGP_LPJ_G0029450.1 mouse_genomes_project 5 52311873 52319537 + MGP_LPJ_P0071482 Anapc4 protein_coding protein_coding MGP_LPJ_T0071483.1 MGP_LPJ_G0029450.1 mouse_genomes_project 5 52316588 52317726 + Anapc4 protein_coding retained_intron MGP_LPJ_T0071484.1 MGP_LPJ_G0029450.1 mouse_genomes_project 5 52319174 52341037 + Anapc4 protein_coding retained_intron MGP_LPJ_T0071485.1 MGP_LPJ_G0029450.1 mouse_genomes_project 5 52336277 52338841 + Anapc4 protein_coding retained_intron MGP_LPJ_T0071486.1 MGP_LPJ_G0029450.1 mouse_genomes_project 5 52340929 52347867 + Anapc4 protein_coding retained_intron MGP_LPJ_T0071487.1 MGP_LPJ_G0029450.1 mouse_genomes_project 5 52342783 52344420 + Anapc4 protein_coding retained_intron MGP_LPJ_T0071488.1 MGP_LPJ_G0029450.1 mouse_genomes_project 5 52343025 52346525 + Anapc4 protein_coding retained_intron MGP_LPJ_T0071489.1 MGP_LPJ_G0029450.1 mouse_genomes_project 5 52347483 52348605 + Anapc4 protein_coding retained_intron MGP_LPJ_T0011625.1 MGP_LPJ_G0009743.1 mouse_genomes_project 5 128602874 128603138 + Gm23171 misc_RNA misc_RNA MGP_LPJ_T0008365.1 MGP_LPJ_G0006799.1 mouse_genomes_project 5 127260989 127480233 - lincRNA lincRNA MGP_LPJ_T0070268.1 MGP_LPJ_G0029244.1 mouse_genomes_project 5 22577889 22580286 - MGP_LPJ_P0070268 Tmub1 protein_coding protein_coding MGP_LPJ_T0070269.1 MGP_LPJ_G0029244.1 mouse_genomes_project 5 22577897 22580057 - MGP_LPJ_P0070269 Tmub1 protein_coding protein_coding MGP_LPJ_T0070270.1 MGP_LPJ_G0029244.1 mouse_genomes_project 5 22577897 22579749 - MGP_LPJ_P0070270 Tmub1 protein_coding protein_coding MGP_LPJ_T0070271.1 MGP_LPJ_G0029244.1 mouse_genomes_project 5 22578480 22580019 - MGP_LPJ_P0070271 Tmub1 protein_coding protein_coding MGP_LPJ_T0070272.1 MGP_LPJ_G0029244.1 mouse_genomes_project 5 22578984 22580223 - MGP_LPJ_P0070272 Tmub1 protein_coding protein_coding MGP_LPJ_T0018099.1 MGP_LPJ_G0015517.1 mouse_genomes_project 5 64769247 64874131 - Gm20033 processed_transcript antisense MGP_LPJ_T0018100.1 MGP_LPJ_G0015517.1 mouse_genomes_project 5 64769251 64769988 - Gm20033 processed_transcript retained_intron MGP_LPJ_T0018101.1 MGP_LPJ_G0015517.1 mouse_genomes_project 5 64769365 64776713 - Gm20033 processed_transcript retained_intron MGP_LPJ_T0018102.1 MGP_LPJ_G0015517.1 mouse_genomes_project 5 64770806 64786372 - Gm20033 processed_transcript processed_transcript MGP_LPJ_T0018103.1 MGP_LPJ_G0015517.1 mouse_genomes_project 5 64871235 64873850 - Gm20033 processed_transcript retained_intron MGP_LPJ_T0018104.1 MGP_LPJ_G0015517.1 mouse_genomes_project 5 64871331 64874130 - Gm20033 processed_transcript antisense MGP_LPJ_T0100818.1 MGP_LPJ_G0039081.1 mouse_genomes_project 5 5346847 5346991 + Gm23993 snoRNA snoRNA MGP_LPJ_T0100832.1 MGP_LPJ_G0039095.1 mouse_genomes_project 5 60603757 60603880 - Gm23708 snoRNA snoRNA MGP_LPJ_T0001640.1 MGP_LPJ_G0001554.1 mouse_genomes_project 5 57635115 57637536 + TEC TEC MGP_LPJ_T0072910.1 MGP_LPJ_G0029750.1 mouse_genomes_project 5 110768476 110797082 - MGP_LPJ_P0072910 Tmed5 protein_coding protein_coding MGP_LPJ_T0072911.1 MGP_LPJ_G0029750.1 mouse_genomes_project 5 110779795 110797100 - MGP_LPJ_P0072911 Tmed5 protein_coding protein_coding MGP_LPJ_T0072912.1 MGP_LPJ_G0029750.1 mouse_genomes_project 5 110785189 110797137 - MGP_LPJ_P0072912 Tmed5 protein_coding protein_coding MGP_LPJ_T0072913.1 MGP_LPJ_G0029750.1 mouse_genomes_project 5 110786615 110797066 - MGP_LPJ_P0072913 Tmed5 protein_coding protein_coding MGP_LPJ_T0072914.1 MGP_LPJ_G0029750.1 mouse_genomes_project 5 110793985 110797050 - MGP_LPJ_P0072914 Tmed5 protein_coding protein_coding MGP_LPJ_T0072915.1 MGP_LPJ_G0029750.1 mouse_genomes_project 5 110794240 110797047 - MGP_LPJ_P0072915 Tmed5 protein_coding protein_coding MGP_LPJ_T0071627.1 MGP_LPJ_G0029479.1 mouse_genomes_project 5 65572132 65644476 - MGP_LPJ_P0071627 Gm43552 protein_coding protein_coding MGP_LPJ_T0071982.1 MGP_LPJ_G0029538.1 mouse_genomes_project 5 75704639 75738383 + MGP_LPJ_P0071982 Pdgfra protein_coding protein_coding MGP_LPJ_T0071983.1 MGP_LPJ_G0029538.1 mouse_genomes_project 5 75704653 75754183 + MGP_LPJ_P0071983 Pdgfra protein_coding protein_coding MGP_LPJ_T0071984.1 MGP_LPJ_G0029538.1 mouse_genomes_project 5 75704699 75729974 + MGP_LPJ_P0071984 Pdgfra protein_coding non_stop_decay MGP_LPJ_T0071985.1 MGP_LPJ_G0029538.1 mouse_genomes_project 5 75705282 75738997 + MGP_LPJ_P0071985 Pdgfra protein_coding protein_coding MGP_LPJ_T0071986.1 MGP_LPJ_G0029538.1 mouse_genomes_project 5 75705933 75717490 + Pdgfra protein_coding retained_intron MGP_LPJ_T0071987.1 MGP_LPJ_G0029538.1 mouse_genomes_project 5 75708689 75718519 + MGP_LPJ_P0071987 Pdgfra protein_coding protein_coding MGP_LPJ_T0071988.1 MGP_LPJ_G0029538.1 mouse_genomes_project 5 75709994 75754169 + MGP_LPJ_P0071988 Pdgfra protein_coding protein_coding MGP_LPJ_T0071989.1 MGP_LPJ_G0029538.1 mouse_genomes_project 5 75710928 75721326 + MGP_LPJ_P0071989 Pdgfra protein_coding protein_coding MGP_LPJ_T0071990.1 MGP_LPJ_G0029538.1 mouse_genomes_project 5 75716603 75722703 + MGP_LPJ_P0071990 Pdgfra protein_coding protein_coding MGP_LPJ_T0010739.1 MGP_LPJ_G0008857.1 mouse_genomes_project 5 139332036 139332135 + Gm26340 miRNA miRNA MGP_LPJ_T0010750.1 MGP_LPJ_G0008868.1 mouse_genomes_project 5 143495758 143495842 - Mir25 miRNA miRNA MGP_LPJ_T0072266.1 MGP_LPJ_G0029601.1 mouse_genomes_project 5 89492691 89505207 + MGP_LPJ_P0072266 Smr2 protein_coding protein_coding MGP_LPJ_T0072267.1 MGP_LPJ_G0029601.1 mouse_genomes_project 5 89492691 89519049 + MGP_LPJ_P0072267 Smr2 protein_coding protein_coding MGP_LPJ_T0072268.1 MGP_LPJ_G0029601.1 mouse_genomes_project 5 89492691 89519049 + MGP_LPJ_P0072268 Smr2 protein_coding protein_coding MGP_LPJ_T0072097.1 MGP_LPJ_G0029559.1 mouse_genomes_project 5 77985897 78025890 + MGP_LPJ_P0072097 Polr2b protein_coding protein_coding MGP_LPJ_T0072098.1 MGP_LPJ_G0029559.1 mouse_genomes_project 5 77986241 77989031 + Polr2b protein_coding retained_intron MGP_LPJ_T0072099.1 MGP_LPJ_G0029559.1 mouse_genomes_project 5 78002417 78003633 + Polr2b protein_coding retained_intron MGP_LPJ_T0072100.1 MGP_LPJ_G0029559.1 mouse_genomes_project 5 78016888 78019463 + Polr2b protein_coding retained_intron MGP_LPJ_T0071293.1 MGP_LPJ_G0029420.1 mouse_genomes_project 5 41098950 41257799 + MGP_LPJ_P0071293 Gm16223 protein_coding protein_coding MGP_LPJ_T0004692.1 MGP_LPJ_G0004064.1 mouse_genomes_project 5 34303105 34310673 - 4931431C16Rik antisense antisense MGP_LPJ_T0098648.1 MGP_LPJ_G0036918.1 mouse_genomes_project 5 157362139 157363920 + Gm43807 sense_intronic sense_intronic MGP_LPJ_T0004708.1 MGP_LPJ_G0004075.1 mouse_genomes_project 5 43325024 43329344 + Gm42982 antisense antisense MGP_LPJ_T0073128.1 MGP_LPJ_G0029797.1 mouse_genomes_project 5 113874542 113875897 + MGP_LPJ_P0073128 Chek2 protein_coding protein_coding MGP_LPJ_T0073129.1 MGP_LPJ_G0029797.1 mouse_genomes_project 5 113874546 113905282 + MGP_LPJ_P0073129 Chek2 protein_coding nonsense_mediated_decay MGP_LPJ_T0073130.1 MGP_LPJ_G0029797.1 mouse_genomes_project 5 113874563 113905294 + MGP_LPJ_P0073130 Chek2 protein_coding protein_coding MGP_LPJ_T0073131.1 MGP_LPJ_G0029797.1 mouse_genomes_project 5 113874792 113875903 + MGP_LPJ_P0073131 Chek2 protein_coding protein_coding MGP_LPJ_T0073132.1 MGP_LPJ_G0029797.1 mouse_genomes_project 5 113876017 113880040 + Chek2 protein_coding retained_intron MGP_LPJ_T0072270.1 MGP_LPJ_G0029603.1 mouse_genomes_project 5 89566392 89566469 - MGP_LPJ_P0072270 Gm11115 protein_coding protein_coding MGP_LPJ_T0004668.1 MGP_LPJ_G0004044.1 mouse_genomes_project 5 22455440 22458734 + Gm15589 antisense antisense MGP_LPJ_T0008210.1 MGP_LPJ_G0006691.1 mouse_genomes_project 5 89292828 89298214 + BC037156 lincRNA lincRNA MGP_LPJ_T0001761.1 MGP_LPJ_G0001673.1 mouse_genomes_project 5 103978425 103980025 + TEC TEC MGP_LPJ_T0004855.1 MGP_LPJ_G0004180.1 mouse_genomes_project 5 128538577 128539498 + Pitpnm2os2 antisense antisense MGP_LPJ_T0004856.1 MGP_LPJ_G0004180.1 mouse_genomes_project 5 128538630 128544010 + Pitpnm2os2 antisense antisense MGP_LPJ_T0004857.1 MGP_LPJ_G0004180.1 mouse_genomes_project 5 128539312 128541779 + Pitpnm2os2 antisense antisense MGP_LPJ_T0001910.1 MGP_LPJ_G0001820.1 mouse_genomes_project 5 140458276 140459917 - TEC TEC MGP_LPJ_T0001516.1 MGP_LPJ_G0001432.1 mouse_genomes_project 5 28347988 28351986 - TEC TEC MGP_LPJ_T0073885.1 MGP_LPJ_G0029945.1 mouse_genomes_project 5 126309992 126332621 + MGP_LPJ_P0073885 Ppp1cc protein_coding protein_coding MGP_LPJ_T0073886.1 MGP_LPJ_G0029945.1 mouse_genomes_project 5 126310070 126332621 + MGP_LPJ_P0073886 Ppp1cc protein_coding protein_coding MGP_LPJ_T0073887.1 MGP_LPJ_G0029945.1 mouse_genomes_project 5 126310070 126332617 + MGP_LPJ_P0073887 Ppp1cc protein_coding nonsense_mediated_decay MGP_LPJ_T0073888.1 MGP_LPJ_G0029945.1 mouse_genomes_project 5 126310070 126332621 + MGP_LPJ_P0073888 Ppp1cc protein_coding nonsense_mediated_decay MGP_LPJ_T0073889.1 MGP_LPJ_G0029945.1 mouse_genomes_project 5 126310275 126332625 + MGP_LPJ_P0073889 Ppp1cc protein_coding unknown_likely_coding MGP_LPJ_T0073890.1 MGP_LPJ_G0029945.1 mouse_genomes_project 5 126310307 126332444 + MGP_LPJ_P0073890 Ppp1cc protein_coding protein_coding MGP_LPJ_T0073891.1 MGP_LPJ_G0029945.1 mouse_genomes_project 5 126310671 126321428 + Ppp1cc protein_coding retained_intron MGP_LPJ_T0073892.1 MGP_LPJ_G0029945.1 mouse_genomes_project 5 126320629 126332613 + MGP_LPJ_P0073892 Ppp1cc protein_coding nonsense_mediated_decay MGP_LPJ_T0073893.1 MGP_LPJ_G0029945.1 mouse_genomes_project 5 126323652 126324937 + Ppp1cc protein_coding retained_intron MGP_LPJ_T0073894.1 MGP_LPJ_G0029945.1 mouse_genomes_project 5 126323927 126332613 + MGP_LPJ_P0073894 Ppp1cc protein_coding nonsense_mediated_decay MGP_LPJ_T0008268.1 MGP_LPJ_G0006735.1 mouse_genomes_project 5 108901988 108904666 - 4930432H08Rik lincRNA lincRNA MGP_LPJ_T0071541.1 MGP_LPJ_G0029462.1 mouse_genomes_project 5 63662186 63812407 + Nwd2 protein_coding retained_intron MGP_LPJ_T0071542.1 MGP_LPJ_G0029462.1 mouse_genomes_project 5 63662192 63835852 + MGP_LPJ_P0071542 Nwd2 protein_coding protein_coding MGP_LPJ_T0071543.1 MGP_LPJ_G0029462.1 mouse_genomes_project 5 63662417 63826044 + MGP_LPJ_P0071543 Nwd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0071544.1 MGP_LPJ_G0029462.1 mouse_genomes_project 5 63825858 63835852 + MGP_LPJ_P0071544 Nwd2 protein_coding protein_coding MGP_LPJ_T0070478.1 MGP_LPJ_G0029292.1 mouse_genomes_project 5 28992158 29034694 + MGP_LPJ_P0070478 Kcnk3 protein_coding protein_coding MGP_LPJ_T0070479.1 MGP_LPJ_G0029292.1 mouse_genomes_project 5 29030814 29031674 + Kcnk3 protein_coding processed_transcript MGP_LPJ_T0072269.1 MGP_LPJ_G0029602.1 mouse_genomes_project 5 89520568 89521532 - MGP_LPJ_P0072269 Gm11116 protein_coding protein_coding MGP_LPJ_T0072894.1 MGP_LPJ_G0029749.1 mouse_genomes_project 5 110727252 110769274 + Mtf2 protein_coding processed_transcript MGP_LPJ_T0072895.1 MGP_LPJ_G0029749.1 mouse_genomes_project 5 110727289 110769569 + MGP_LPJ_P0072895 Mtf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0072896.1 MGP_LPJ_G0029749.1 mouse_genomes_project 5 110727294 110769735 + Mtf2 protein_coding processed_transcript MGP_LPJ_T0072897.1 MGP_LPJ_G0029749.1 mouse_genomes_project 5 110727294 110770380 + Mtf2 protein_coding processed_transcript MGP_LPJ_T0072898.1 MGP_LPJ_G0029749.1 mouse_genomes_project 5 110727295 110731164 + Mtf2 protein_coding retained_intron MGP_LPJ_T0072899.1 MGP_LPJ_G0029749.1 mouse_genomes_project 5 110727307 110749567 + MGP_LPJ_P0072899 Mtf2 protein_coding protein_coding MGP_LPJ_T0072900.1 MGP_LPJ_G0029749.1 mouse_genomes_project 5 110727320 110770381 + MGP_LPJ_P0072900 Mtf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0072901.1 MGP_LPJ_G0029749.1 mouse_genomes_project 5 110727320 110769112 + MGP_LPJ_P0072901 Mtf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0072902.1 MGP_LPJ_G0029749.1 mouse_genomes_project 5 110727320 110771115 + MGP_LPJ_P0072902 Mtf2 protein_coding protein_coding MGP_LPJ_T0072903.1 MGP_LPJ_G0029749.1 mouse_genomes_project 5 110727322 110756345 + MGP_LPJ_P0072903 Mtf2 protein_coding protein_coding MGP_LPJ_T0072904.1 MGP_LPJ_G0029749.1 mouse_genomes_project 5 110727322 110769196 + MGP_LPJ_P0072904 Mtf2 protein_coding protein_coding MGP_LPJ_T0072905.1 MGP_LPJ_G0029749.1 mouse_genomes_project 5 110727335 110750155 + Mtf2 protein_coding processed_transcript MGP_LPJ_T0072906.1 MGP_LPJ_G0029749.1 mouse_genomes_project 5 110734454 110742712 + Mtf2 protein_coding processed_transcript MGP_LPJ_T0072907.1 MGP_LPJ_G0029749.1 mouse_genomes_project 5 110739688 110769581 + Mtf2 protein_coding processed_transcript MGP_LPJ_T0072908.1 MGP_LPJ_G0029749.1 mouse_genomes_project 5 110749194 110762951 + MGP_LPJ_P0072908 Mtf2 protein_coding protein_coding MGP_LPJ_T0072909.1 MGP_LPJ_G0029749.1 mouse_genomes_project 5 110754280 110766162 + MGP_LPJ_P0072909 Mtf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0004860.1 MGP_LPJ_G0004183.1 mouse_genomes_project 5 129028524 129031606 - 4930404A12Rik antisense antisense MGP_LPJ_T0004861.1 MGP_LPJ_G0004183.1 mouse_genomes_project 5 129028525 129031606 - 4930404A12Rik antisense antisense MGP_LPJ_T0008096.1 MGP_LPJ_G0006605.1 mouse_genomes_project 5 30036870 30045146 - Gm43660 lincRNA lincRNA MGP_LPJ_T0071816.1 MGP_LPJ_G0029507.1 mouse_genomes_project 5 71792162 71898219 - protein_coding processed_transcript MGP_LPJ_T0071817.1 MGP_LPJ_G0029507.1 mouse_genomes_project 5 71792317 71792549 - protein_coding transcribed_processed_pseudogene MGP_LPJ_T0001908.1 MGP_LPJ_G0001818.1 mouse_genomes_project 5 139944846 139947862 - TEC TEC MGP_LPJ_T0072168.1 MGP_LPJ_G0029568.1 mouse_genomes_project 5 87468290 87528902 - MGP_LPJ_P0072168 Tmprss11c protein_coding protein_coding MGP_LPJ_T0072169.1 MGP_LPJ_G0029568.1 mouse_genomes_project 5 87468561 87528854 - MGP_LPJ_P0072169 Tmprss11c protein_coding protein_coding MGP_LPJ_T0008350.1 MGP_LPJ_G0006787.1 mouse_genomes_project 5 122848340 122854665 + 1700081H04Rik lincRNA lincRNA MGP_LPJ_T0004878.1 MGP_LPJ_G0004198.1 mouse_genomes_project 5 139918537 139935118 - Wbscr25 antisense antisense MGP_LPJ_T0004879.1 MGP_LPJ_G0004198.1 mouse_genomes_project 5 139924800 139934275 - Wbscr25 antisense antisense MGP_LPJ_T0004820.1 MGP_LPJ_G0004157.1 mouse_genomes_project 5 119955387 119984201 + Srrm4os antisense antisense MGP_LPJ_T0004821.1 MGP_LPJ_G0004157.1 mouse_genomes_project 5 119955387 119980811 + Srrm4os antisense antisense MGP_LPJ_T0099554.1 MGP_LPJ_G0037817.1 mouse_genomes_project 5 18010267 18010371 + Gm23570 snRNA snRNA MGP_LPJ_T0073648.1 MGP_LPJ_G0029897.1 mouse_genomes_project 5 121892129 121915837 + MGP_LPJ_P0073648 2410131K14Rik protein_coding protein_coding MGP_LPJ_T0072020.1 MGP_LPJ_G0029545.1 mouse_genomes_project 5 76945957 76977515 - MGP_LPJ_P0072020 Nmu protein_coding protein_coding MGP_LPJ_T0074080.1 MGP_LPJ_G0029975.1 mouse_genomes_project 5 127792648 127794071 + MGP_LPJ_P0074080 B3gnt4 protein_coding protein_coding MGP_LPJ_T0008386.1 MGP_LPJ_G0006811.1 mouse_genomes_project 5 130371134 130395817 + Gm42952 lincRNA lincRNA MGP_LPJ_T0008387.1 MGP_LPJ_G0006811.1 mouse_genomes_project 5 130374762 130396018 + Gm42952 lincRNA lincRNA MGP_LPJ_T0008388.1 MGP_LPJ_G0006811.1 mouse_genomes_project 5 130374774 130389412 + Gm42952 lincRNA lincRNA MGP_LPJ_T0008389.1 MGP_LPJ_G0006811.1 mouse_genomes_project 5 130374779 130388066 + Gm42952 lincRNA lincRNA MGP_LPJ_T0008390.1 MGP_LPJ_G0006811.1 mouse_genomes_project 5 130374784 130395961 + Gm42952 lincRNA lincRNA MGP_LPJ_T0008391.1 MGP_LPJ_G0006811.1 mouse_genomes_project 5 130374798 130389043 + Gm42952 lincRNA lincRNA MGP_LPJ_T0074551.1 MGP_LPJ_G0030057.1 mouse_genomes_project 5 139075516 139085528 - MGP_LPJ_P0074551 Ncf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0074552.1 MGP_LPJ_G0030057.1 mouse_genomes_project 5 139075723 139085528 - MGP_LPJ_P0074552 Ncf1 protein_coding protein_coding MGP_LPJ_T0074553.1 MGP_LPJ_G0030057.1 mouse_genomes_project 5 139075723 139085528 - MGP_LPJ_P0074553 Ncf1 protein_coding protein_coding MGP_LPJ_T0074554.1 MGP_LPJ_G0030057.1 mouse_genomes_project 5 139075723 139085528 - MGP_LPJ_P0074554 Ncf1 protein_coding protein_coding MGP_LPJ_T0074555.1 MGP_LPJ_G0030057.1 mouse_genomes_project 5 139076835 139077686 - Ncf1 protein_coding retained_intron MGP_LPJ_T0074556.1 MGP_LPJ_G0030057.1 mouse_genomes_project 5 139078908 139083859 - Ncf1 protein_coding retained_intron MGP_LPJ_T0074557.1 MGP_LPJ_G0030057.1 mouse_genomes_project 5 139081180 139083272 - Ncf1 protein_coding retained_intron MGP_LPJ_T0073726.1 MGP_LPJ_G0029915.1 mouse_genomes_project 5 124607505 124635975 - MGP_LPJ_P0073726 Oas3 protein_coding protein_coding MGP_LPJ_T0073727.1 MGP_LPJ_G0029915.1 mouse_genomes_project 5 124608623 124610666 - MGP_LPJ_P0073727 Oas3 protein_coding protein_coding MGP_LPJ_T0073728.1 MGP_LPJ_G0029915.1 mouse_genomes_project 5 124609806 124612062 - Oas3 protein_coding retained_intron MGP_LPJ_T0073729.1 MGP_LPJ_G0029915.1 mouse_genomes_project 5 124622261 124635954 - Oas3 protein_coding retained_intron MGP_LPJ_T0001907.1 MGP_LPJ_G0001817.1 mouse_genomes_project 5 139857920 139859542 - TEC TEC MGP_LPJ_T0004842.1 MGP_LPJ_G0004171.1 mouse_genomes_project 5 125946885 125947519 + 1700008B11Rik antisense antisense MGP_LPJ_T0070402.1 MGP_LPJ_G0029275.1 mouse_genomes_project 5 27805081 27829814 + MGP_LPJ_P0070402 Nom1 protein_coding protein_coding MGP_LPJ_T0070403.1 MGP_LPJ_G0029275.1 mouse_genomes_project 5 27813782 27818818 + Nom1 protein_coding retained_intron MGP_LPJ_T0014802.1 MGP_LPJ_G0012893.1 mouse_genomes_project 5 5143239 5143654 + processed_pseudogene processed_pseudogene MGP_LPJ_T0073397.1 MGP_LPJ_G0029851.1 mouse_genomes_project 5 118237722 118240647 - MGP_LPJ_P0073397 Gm9936 protein_coding protein_coding MGP_LPJ_T0075780.1 MGP_LPJ_G0030301.1 mouse_genomes_project 5 154940857 154990737 - MGP_LPJ_P0075780 Ubl3 protein_coding protein_coding MGP_LPJ_T0075781.1 MGP_LPJ_G0030301.1 mouse_genomes_project 5 154941352 154990864 - MGP_LPJ_P0075781 Ubl3 protein_coding protein_coding MGP_LPJ_T0075782.1 MGP_LPJ_G0030301.1 mouse_genomes_project 5 154941365 154990864 - MGP_LPJ_P0075782 Ubl3 protein_coding protein_coding MGP_LPJ_T0075783.1 MGP_LPJ_G0030301.1 mouse_genomes_project 5 154942201 154975648 - Ubl3 protein_coding processed_transcript MGP_LPJ_T0075784.1 MGP_LPJ_G0030301.1 mouse_genomes_project 5 154945497 154989736 - Ubl3 protein_coding processed_transcript MGP_LPJ_T0075785.1 MGP_LPJ_G0030301.1 mouse_genomes_project 5 154945507 154989728 - Ubl3 protein_coding processed_transcript MGP_LPJ_T0075786.1 MGP_LPJ_G0030301.1 mouse_genomes_project 5 154984640 154990773 - Ubl3 protein_coding retained_intron MGP_LPJ_T0001726.1 MGP_LPJ_G0001638.1 mouse_genomes_project 5 75557580 75560426 - TEC TEC MGP_LPJ_T0100861.1 MGP_LPJ_G0039124.1 mouse_genomes_project 5 134420855 134420990 + Gm23245 snoRNA snoRNA MGP_LPJ_T0004873.1 MGP_LPJ_G0004193.1 mouse_genomes_project 5 136759352 136769353 + Gm42439 antisense antisense MGP_LPJ_T0074023.1 MGP_LPJ_G0029964.1 mouse_genomes_project 5 127249599 127260633 - MGP_LPJ_P0074023 Morn3 protein_coding nonsense_mediated_decay MGP_LPJ_T0074024.1 MGP_LPJ_G0029964.1 mouse_genomes_project 5 127249619 127251517 - MGP_LPJ_P0074024 Morn3 protein_coding protein_coding MGP_LPJ_T0074025.1 MGP_LPJ_G0029964.1 mouse_genomes_project 5 127249692 127251525 - MGP_LPJ_P0074025 Morn3 protein_coding protein_coding MGP_LPJ_T0074026.1 MGP_LPJ_G0029964.1 mouse_genomes_project 5 127251095 127260392 - MGP_LPJ_P0074026 Morn3 protein_coding protein_coding MGP_LPJ_T0074027.1 MGP_LPJ_G0029964.1 mouse_genomes_project 5 127251117 127260622 - MGP_LPJ_P0074027 Morn3 protein_coding nonsense_mediated_decay MGP_LPJ_T0099575.1 MGP_LPJ_G0037838.1 mouse_genomes_project 5 60388658 60388766 - Gm23331 snRNA snRNA MGP_LPJ_T0004696.1 MGP_LPJ_G0004068.1 mouse_genomes_project 5 35836224 35839762 - Gm26647 antisense antisense MGP_LPJ_T0008270.1 MGP_LPJ_G0006737.1 mouse_genomes_project 5 109005492 109010698 - Gm26872 lincRNA lincRNA MGP_LPJ_T0001736.1 MGP_LPJ_G0001648.1 mouse_genomes_project 5 88692855 88693942 + TEC TEC MGP_LPJ_T0072012.1 MGP_LPJ_G0029543.1 mouse_genomes_project 5 76827212 76917066 - MGP_LPJ_P0072012 Clock protein_coding protein_coding MGP_LPJ_T0072013.1 MGP_LPJ_G0029543.1 mouse_genomes_project 5 76829504 76916822 - MGP_LPJ_P0072013 Clock protein_coding protein_coding MGP_LPJ_T0072014.1 MGP_LPJ_G0029543.1 mouse_genomes_project 5 76831180 76886171 - MGP_LPJ_P0072014 Clock protein_coding protein_coding MGP_LPJ_T0072015.1 MGP_LPJ_G0029543.1 mouse_genomes_project 5 76845469 76917028 - Clock protein_coding retained_intron MGP_LPJ_T0072016.1 MGP_LPJ_G0029543.1 mouse_genomes_project 5 76865867 76917046 - Clock protein_coding processed_transcript MGP_LPJ_T0072017.1 MGP_LPJ_G0029543.1 mouse_genomes_project 5 76884112 76917046 - Clock protein_coding retained_intron MGP_LPJ_T0102203.1 MGP_LPJ_G0040240.1 mouse_genomes_project 5 154889650 154889958 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0070544.1 MGP_LPJ_G0029302.1 mouse_genomes_project 5 29355723 29367407 - MGP_LPJ_P0070544 Cgref1 protein_coding protein_coding MGP_LPJ_T0070545.1 MGP_LPJ_G0029302.1 mouse_genomes_project 5 29357798 29367222 - Cgref1 protein_coding retained_intron MGP_LPJ_T0001781.1 MGP_LPJ_G0001693.1 mouse_genomes_project 5 111305426 111307538 - TEC TEC MGP_LPJ_T0073596.1 MGP_LPJ_G0029887.1 mouse_genomes_project 5 120897655 120935954 + MGP_LPJ_P0073596 Vsig10 protein_coding protein_coding MGP_LPJ_T0073597.1 MGP_LPJ_G0029887.1 mouse_genomes_project 5 120897865 120934060 + MGP_LPJ_P0073597 Vsig10 protein_coding protein_coding MGP_LPJ_T0073598.1 MGP_LPJ_G0029887.1 mouse_genomes_project 5 120897891 120919827 + Vsig10 protein_coding retained_intron MGP_LPJ_T0073599.1 MGP_LPJ_G0029887.1 mouse_genomes_project 5 120897934 120904562 + Vsig10 protein_coding retained_intron MGP_LPJ_T0073600.1 MGP_LPJ_G0029887.1 mouse_genomes_project 5 120903046 120935946 + Vsig10 protein_coding processed_transcript MGP_LPJ_T0073601.1 MGP_LPJ_G0029887.1 mouse_genomes_project 5 120930672 120935954 + Vsig10 protein_coding processed_transcript MGP_LPJ_T0073252.1 MGP_LPJ_G0029825.1 mouse_genomes_project 5 117020675 117028818 + MGP_LPJ_P0073252 Iscu protein_coding protein_coding MGP_LPJ_T0073253.1 MGP_LPJ_G0029825.1 mouse_genomes_project 5 117020730 117028803 + MGP_LPJ_P0073253 Iscu protein_coding protein_coding MGP_LPJ_T0073254.1 MGP_LPJ_G0029825.1 mouse_genomes_project 5 117020730 117028328 + MGP_LPJ_P0073254 Iscu protein_coding protein_coding MGP_LPJ_T0073255.1 MGP_LPJ_G0029825.1 mouse_genomes_project 5 117020745 117024967 + MGP_LPJ_P0073255 Iscu protein_coding nonsense_mediated_decay MGP_LPJ_T0073256.1 MGP_LPJ_G0029825.1 mouse_genomes_project 5 117020932 117028544 + MGP_LPJ_P0073256 Iscu protein_coding protein_coding MGP_LPJ_T0073257.1 MGP_LPJ_G0029825.1 mouse_genomes_project 5 117020952 117028475 + MGP_LPJ_P0073257 Iscu protein_coding nonsense_mediated_decay MGP_LPJ_T0073258.1 MGP_LPJ_G0029825.1 mouse_genomes_project 5 117021774 117028371 + MGP_LPJ_P0073258 Iscu protein_coding protein_coding MGP_LPJ_T0014854.1 MGP_LPJ_G0012945.1 mouse_genomes_project 5 22343916 22344559 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099561.1 MGP_LPJ_G0037824.1 mouse_genomes_project 5 27854367 27854474 - Gm24538 snRNA snRNA MGP_LPJ_T0074928.1 MGP_LPJ_G0030120.1 mouse_genomes_project 5 142212873 142228485 - MGP_LPJ_P0074928 Serpine1 protein_coding protein_coding MGP_LPJ_T0074929.1 MGP_LPJ_G0030120.1 mouse_genomes_project 5 142212881 142228480 - MGP_LPJ_P0074929 Serpine1 protein_coding protein_coding MGP_LPJ_T0074930.1 MGP_LPJ_G0030120.1 mouse_genomes_project 5 142224767 142228494 - Serpine1 protein_coding retained_intron MGP_LPJ_T0008398.1 MGP_LPJ_G0006817.1 mouse_genomes_project 5 131476372 131495415 + 4933438B17Rik lincRNA lincRNA MGP_LPJ_T0008399.1 MGP_LPJ_G0006817.1 mouse_genomes_project 5 131479778 131539802 + 4933438B17Rik lincRNA lincRNA MGP_LPJ_T0008400.1 MGP_LPJ_G0006817.1 mouse_genomes_project 5 131479785 131495270 + 4933438B17Rik lincRNA lincRNA MGP_LPJ_T0004661.1 MGP_LPJ_G0004038.1 mouse_genomes_project 5 13744141 13748008 - Gm43000 antisense antisense MGP_LPJ_T0072981.1 MGP_LPJ_G0029764.1 mouse_genomes_project 5 111413617 111429304 + MGP_LPJ_P0072981 Fgfrl1 protein_coding protein_coding MGP_LPJ_T0072982.1 MGP_LPJ_G0029764.1 mouse_genomes_project 5 111420002 111429107 + MGP_LPJ_P0072982 Fgfrl1 protein_coding protein_coding MGP_LPJ_T0072983.1 MGP_LPJ_G0029764.1 mouse_genomes_project 5 111420040 111432692 + MGP_LPJ_P0072983 Fgfrl1 protein_coding protein_coding MGP_LPJ_T0072984.1 MGP_LPJ_G0029764.1 mouse_genomes_project 5 111420274 111432664 + MGP_LPJ_P0072984 Fgfrl1 protein_coding protein_coding MGP_LPJ_T0072985.1 MGP_LPJ_G0029764.1 mouse_genomes_project 5 111430841 111431640 + Fgfrl1 protein_coding retained_intron MGP_LPJ_T0008050.1 MGP_LPJ_G0006573.1 mouse_genomes_project 5 1745537 1762193 - Gm42744 lincRNA lincRNA MGP_LPJ_T0001636.1 MGP_LPJ_G0001550.1 mouse_genomes_project 5 57479613 57481560 + TEC TEC MGP_LPJ_T0072502.1 MGP_LPJ_G0029661.1 mouse_genomes_project 5 94793219 94800195 + MGP_LPJ_P0072502 2010109A12Rik protein_coding protein_coding MGP_LPJ_T0072503.1 MGP_LPJ_G0029661.1 mouse_genomes_project 5 94793234 94794149 + 2010109A12Rik protein_coding retained_intron MGP_LPJ_T0001696.1 MGP_LPJ_G0001609.1 mouse_genomes_project 5 68156305 68157654 + TEC TEC MGP_LPJ_T0001608.1 MGP_LPJ_G0001522.1 mouse_genomes_project 5 48707424 48710468 - TEC TEC MGP_LPJ_T0074933.1 MGP_LPJ_G0030122.1 mouse_genomes_project 5 142302788 142317374 - MGP_LPJ_P0074933 Muc3 protein_coding protein_coding MGP_LPJ_T0074934.1 MGP_LPJ_G0030122.1 mouse_genomes_project 5 142302827 142307077 - Muc3 protein_coding processed_transcript MGP_LPJ_T0015028.1 MGP_LPJ_G0013119.1 mouse_genomes_project 5 98064250 98064661 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008466.1 MGP_LPJ_G0006868.1 mouse_genomes_project 5 155429827 155432190 + Gm15409 lincRNA lincRNA MGP_LPJ_T0018133.1 MGP_LPJ_G0015529.1 mouse_genomes_project 5 127676840 127682179 + Gm43813 processed_transcript TEC MGP_LPJ_T0018134.1 MGP_LPJ_G0015529.1 mouse_genomes_project 5 127676840 127679549 + Gm43813 processed_transcript sense_intronic MGP_LPJ_T0073401.1 MGP_LPJ_G0029852.1 mouse_genomes_project 5 118274998 118292137 + MGP_LPJ_P0073401 Oasl2 protein_coding protein_coding MGP_LPJ_T0073402.1 MGP_LPJ_G0029852.1 mouse_genomes_project 5 118275063 118277873 + MGP_LPJ_P0073402 Oasl2 protein_coding protein_coding MGP_LPJ_T0073403.1 MGP_LPJ_G0029852.1 mouse_genomes_project 5 118275092 118277998 + MGP_LPJ_P0073403 Oasl2 protein_coding protein_coding MGP_LPJ_T0073404.1 MGP_LPJ_G0029852.1 mouse_genomes_project 5 118275594 118276413 + Oasl2 protein_coding retained_intron MGP_LPJ_T0073405.1 MGP_LPJ_G0029852.1 mouse_genomes_project 5 118275638 118278303 + Oasl2 protein_coding retained_intron MGP_LPJ_T0073406.1 MGP_LPJ_G0029852.1 mouse_genomes_project 5 118275804 118292129 + MGP_LPJ_P0073406 Oasl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0073407.1 MGP_LPJ_G0029852.1 mouse_genomes_project 5 118279380 118291123 + MGP_LPJ_P0073407 Oasl2 protein_coding protein_coding MGP_LPJ_T0073408.1 MGP_LPJ_G0029852.1 mouse_genomes_project 5 118279869 118282161 + Oasl2 protein_coding retained_intron MGP_LPJ_T0073409.1 MGP_LPJ_G0029852.1 mouse_genomes_project 5 118282652 118284944 + Oasl2 protein_coding retained_intron MGP_LPJ_T0018097.1 MGP_LPJ_G0015516.1 mouse_genomes_project 5 57235325 57390360 - 4932441J04Rik processed_transcript antisense MGP_LPJ_T0018098.1 MGP_LPJ_G0015516.1 mouse_genomes_project 5 57388579 57392641 - 4932441J04Rik processed_transcript retained_intron MGP_LPJ_T0001543.1 MGP_LPJ_G0001457.1 mouse_genomes_project 5 35420692 35423247 + TEC TEC MGP_LPJ_T0098611.1 MGP_LPJ_G0036885.1 mouse_genomes_project 5 1791180 1792914 - Gm43113 sense_intronic sense_intronic MGP_LPJ_T0102200.1 MGP_LPJ_G0040237.1 mouse_genomes_project 5 151889486 151970609 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0072952.1 MGP_LPJ_G0029760.1 mouse_genomes_project 5 111337596 111354800 + MGP_LPJ_P0072952 Tmem175 protein_coding protein_coding MGP_LPJ_T0072953.1 MGP_LPJ_G0029760.1 mouse_genomes_project 5 111337658 111359549 + MGP_LPJ_P0072953 Tmem175 protein_coding protein_coding MGP_LPJ_T0072954.1 MGP_LPJ_G0029760.1 mouse_genomes_project 5 111337828 111358029 + MGP_LPJ_P0072954 Tmem175 protein_coding protein_coding MGP_LPJ_T0072955.1 MGP_LPJ_G0029760.1 mouse_genomes_project 5 111337835 111357437 + MGP_LPJ_P0072955 Tmem175 protein_coding protein_coding MGP_LPJ_T0072956.1 MGP_LPJ_G0029760.1 mouse_genomes_project 5 111352452 111353968 + Tmem175 protein_coding retained_intron MGP_LPJ_T0072957.1 MGP_LPJ_G0029760.1 mouse_genomes_project 5 111355094 111355886 + Tmem175 protein_coding processed_transcript MGP_LPJ_T0014815.1 MGP_LPJ_G0012906.1 mouse_genomes_project 5 11428753 11430055 - processed_pseudogene processed_pseudogene MGP_LPJ_T0070771.1 MGP_LPJ_G0029334.1 mouse_genomes_project 5 30738533 30851887 + Plb1 protein_coding retained_intron MGP_LPJ_T0070772.1 MGP_LPJ_G0029334.1 mouse_genomes_project 5 30738535 30741431 + Plb1 protein_coding retained_intron MGP_LPJ_T0070773.1 MGP_LPJ_G0029334.1 mouse_genomes_project 5 30738535 30756648 + Plb1 protein_coding processed_transcript MGP_LPJ_T0070774.1 MGP_LPJ_G0029334.1 mouse_genomes_project 5 30738539 30885659 + MGP_LPJ_P0070774 Plb1 protein_coding protein_coding MGP_LPJ_T0070775.1 MGP_LPJ_G0029334.1 mouse_genomes_project 5 30738573 30804782 + Plb1 protein_coding retained_intron MGP_LPJ_T0070776.1 MGP_LPJ_G0029334.1 mouse_genomes_project 5 30745586 30842328 + MGP_LPJ_P0070776 Plb1 protein_coding protein_coding MGP_LPJ_T0070777.1 MGP_LPJ_G0029334.1 mouse_genomes_project 5 30753857 30885661 + MGP_LPJ_P0070777 Plb1 protein_coding protein_coding MGP_LPJ_T0070778.1 MGP_LPJ_G0029334.1 mouse_genomes_project 5 30875126 30887825 + Plb1 protein_coding processed_transcript MGP_LPJ_T0070779.1 MGP_LPJ_G0029334.1 mouse_genomes_project 5 30876251 30885654 + Plb1 protein_coding processed_transcript MGP_LPJ_T0014943.1 MGP_LPJ_G0013034.1 mouse_genomes_project 5 59325848 59326227 + processed_pseudogene processed_pseudogene MGP_LPJ_T0071628.1 MGP_LPJ_G0029480.1 mouse_genomes_project 5 65594806 65645043 - MGP_LPJ_P0071628 Smim14 protein_coding protein_coding MGP_LPJ_T0071629.1 MGP_LPJ_G0029480.1 mouse_genomes_project 5 65597720 65644703 - MGP_LPJ_P0071629 Smim14 protein_coding protein_coding MGP_LPJ_T0071630.1 MGP_LPJ_G0029480.1 mouse_genomes_project 5 65597721 65644514 - MGP_LPJ_P0071630 Smim14 protein_coding nonsense_mediated_decay MGP_LPJ_T0071631.1 MGP_LPJ_G0029480.1 mouse_genomes_project 5 65597844 65609186 - Smim14 protein_coding retained_intron MGP_LPJ_T0071632.1 MGP_LPJ_G0029480.1 mouse_genomes_project 5 65600902 65606394 - Smim14 protein_coding retained_intron MGP_LPJ_T0071633.1 MGP_LPJ_G0029480.1 mouse_genomes_project 5 65608440 65693181 - MGP_LPJ_P0071633 Smim14 protein_coding protein_coding MGP_LPJ_T0071634.1 MGP_LPJ_G0029480.1 mouse_genomes_project 5 65615346 65693126 - Smim14 protein_coding retained_intron MGP_LPJ_T0071635.1 MGP_LPJ_G0029480.1 mouse_genomes_project 5 65617294 65644524 - Smim14 protein_coding retained_intron MGP_LPJ_T0071636.1 MGP_LPJ_G0029480.1 mouse_genomes_project 5 65641587 65645043 - Smim14 protein_coding retained_intron MGP_LPJ_T0008448.1 MGP_LPJ_G0006852.1 mouse_genomes_project 5 149731127 149734192 + D130017N08Rik lincRNA lincRNA MGP_LPJ_T0011627.1 MGP_LPJ_G0009745.1 mouse_genomes_project 5 139059965 139060253 + Gm24139 misc_RNA misc_RNA MGP_LPJ_T0074655.1 MGP_LPJ_G0030069.1 mouse_genomes_project 5 139860349 139871914 + MGP_LPJ_P0074655 Wbscr27 protein_coding protein_coding MGP_LPJ_T0074656.1 MGP_LPJ_G0030069.1 mouse_genomes_project 5 139860354 139871000 + MGP_LPJ_P0074656 Wbscr27 protein_coding protein_coding MGP_LPJ_T0074657.1 MGP_LPJ_G0030069.1 mouse_genomes_project 5 139860354 139871000 + MGP_LPJ_P0074657 Wbscr27 protein_coding protein_coding MGP_LPJ_T0074658.1 MGP_LPJ_G0030069.1 mouse_genomes_project 5 139860366 139871000 + MGP_LPJ_P0074658 Wbscr27 protein_coding protein_coding MGP_LPJ_T0074659.1 MGP_LPJ_G0030069.1 mouse_genomes_project 5 139860373 139870479 + MGP_LPJ_P0074659 Wbscr27 protein_coding protein_coding MGP_LPJ_T0074660.1 MGP_LPJ_G0030069.1 mouse_genomes_project 5 139860387 139862406 + MGP_LPJ_P0074660 Wbscr27 protein_coding protein_coding MGP_LPJ_T0074661.1 MGP_LPJ_G0030069.1 mouse_genomes_project 5 139860505 139869911 + MGP_LPJ_P0074661 Wbscr27 protein_coding protein_coding MGP_LPJ_T0074662.1 MGP_LPJ_G0030069.1 mouse_genomes_project 5 139860765 139865896 + Wbscr27 protein_coding processed_transcript MGP_LPJ_T0074663.1 MGP_LPJ_G0030069.1 mouse_genomes_project 5 139869738 139870509 + MGP_LPJ_P0074663 Wbscr27 protein_coding protein_coding MGP_LPJ_T0014972.1 MGP_LPJ_G0013063.1 mouse_genomes_project 5 70249657 70249941 - processed_pseudogene processed_pseudogene MGP_LPJ_T0072922.1 MGP_LPJ_G0029753.1 mouse_genomes_project 5 111004463 111040060 + MGP_LPJ_P0072922 Pigg protein_coding protein_coding MGP_LPJ_T0072923.1 MGP_LPJ_G0029753.1 mouse_genomes_project 5 111004463 111041182 + MGP_LPJ_P0072923 Pigg protein_coding protein_coding MGP_LPJ_T0072924.1 MGP_LPJ_G0029753.1 mouse_genomes_project 5 111004490 111040065 + MGP_LPJ_P0072924 Pigg protein_coding protein_coding MGP_LPJ_T0010681.1 MGP_LPJ_G0008799.1 mouse_genomes_project 5 506172 506289 + Gm26238 miRNA miRNA MGP_LPJ_T0004729.1 MGP_LPJ_G0004092.1 mouse_genomes_project 5 67247478 67248029 - Gm15949 antisense antisense MGP_LPJ_T0073416.1 MGP_LPJ_G0029854.1 mouse_genomes_project 5 118328361 118335966 + MGP_LPJ_P0073416 2210016L21Rik protein_coding protein_coding MGP_LPJ_T0073417.1 MGP_LPJ_G0029854.1 mouse_genomes_project 5 118328407 118333057 + 2210016L21Rik protein_coding retained_intron MGP_LPJ_T0073418.1 MGP_LPJ_G0029854.1 mouse_genomes_project 5 118328413 118333023 + MGP_LPJ_P0073418 2210016L21Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0073419.1 MGP_LPJ_G0029854.1 mouse_genomes_project 5 118328434 118332394 + 2210016L21Rik protein_coding retained_intron MGP_LPJ_T0073420.1 MGP_LPJ_G0029854.1 mouse_genomes_project 5 118331981 118333967 + MGP_LPJ_P0073420 2210016L21Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0014812.1 MGP_LPJ_G0012903.1 mouse_genomes_project 5 8001813 8002069 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008058.1 MGP_LPJ_G0006581.1 mouse_genomes_project 5 9571568 9580179 + Gm29066 lincRNA lincRNA MGP_LPJ_T0001930.1 MGP_LPJ_G0001840.1 mouse_genomes_project 5 153790406 153791466 + TEC TEC MGP_LPJ_T0071250.1 MGP_LPJ_G0029412.1 mouse_genomes_project 5 37209467 37354009 - MGP_LPJ_P0071250 Slc2a9 protein_coding protein_coding MGP_LPJ_T0071251.1 MGP_LPJ_G0029412.1 mouse_genomes_project 5 37209467 37349770 - MGP_LPJ_P0071251 Slc2a9 protein_coding protein_coding MGP_LPJ_T0071252.1 MGP_LPJ_G0029412.1 mouse_genomes_project 5 37209468 37362570 - MGP_LPJ_P0071252 Slc2a9 protein_coding protein_coding MGP_LPJ_T0071253.1 MGP_LPJ_G0029412.1 mouse_genomes_project 5 37209500 37373851 - MGP_LPJ_P0071253 Slc2a9 protein_coding protein_coding MGP_LPJ_T0071254.1 MGP_LPJ_G0029412.1 mouse_genomes_project 5 37209833 37374817 - MGP_LPJ_P0071254 Slc2a9 protein_coding protein_coding MGP_LPJ_T0071255.1 MGP_LPJ_G0029412.1 mouse_genomes_project 5 37209833 37349622 - MGP_LPJ_P0071255 Slc2a9 protein_coding nonsense_mediated_decay MGP_LPJ_T0071256.1 MGP_LPJ_G0029412.1 mouse_genomes_project 5 37211277 37349595 - MGP_LPJ_P0071256 Slc2a9 protein_coding protein_coding MGP_LPJ_T0071257.1 MGP_LPJ_G0029412.1 mouse_genomes_project 5 37243982 37349646 - MGP_LPJ_P0071257 Slc2a9 protein_coding protein_coding MGP_LPJ_T0071258.1 MGP_LPJ_G0029412.1 mouse_genomes_project 5 37287557 37316002 - Slc2a9 protein_coding processed_transcript MGP_LPJ_T0071259.1 MGP_LPJ_G0029412.1 mouse_genomes_project 5 37315822 37373778 - MGP_LPJ_P0071259 Slc2a9 protein_coding protein_coding MGP_LPJ_T0071260.1 MGP_LPJ_G0029412.1 mouse_genomes_project 5 37345915 37373860 - Slc2a9 protein_coding processed_transcript MGP_LPJ_T0071261.1 MGP_LPJ_G0029412.1 mouse_genomes_project 5 37353615 37362543 - Slc2a9 protein_coding retained_intron MGP_LPJ_T0001604.1 MGP_LPJ_G0001518.1 mouse_genomes_project 5 48409583 48411234 - TEC TEC MGP_LPJ_T0004784.1 MGP_LPJ_G0004130.1 mouse_genomes_project 5 106346754 106353575 + Gm26703 antisense antisense MGP_LPJ_T0004785.1 MGP_LPJ_G0004130.1 mouse_genomes_project 5 106346828 106348464 + Gm26703 antisense antisense MGP_LPJ_T0004786.1 MGP_LPJ_G0004130.1 mouse_genomes_project 5 106351430 106357658 + Gm26703 antisense antisense MGP_LPJ_T0071028.1 MGP_LPJ_G0029373.1 mouse_genomes_project 5 33626602 33714424 + MGP_LPJ_P0071028 Rgs12 protein_coding protein_coding MGP_LPJ_T0071029.1 MGP_LPJ_G0029373.1 mouse_genomes_project 5 33626605 33700923 + Rgs12 protein_coding retained_intron MGP_LPJ_T0071030.1 MGP_LPJ_G0029373.1 mouse_genomes_project 5 33644003 33720519 + MGP_LPJ_P0071030 Rgs12 protein_coding protein_coding MGP_LPJ_T0071031.1 MGP_LPJ_G0029373.1 mouse_genomes_project 5 33653027 33654492 + Rgs12 protein_coding processed_transcript MGP_LPJ_T0071032.1 MGP_LPJ_G0029373.1 mouse_genomes_project 5 33654202 33700334 + Rgs12 protein_coding processed_transcript MGP_LPJ_T0071033.1 MGP_LPJ_G0029373.1 mouse_genomes_project 5 33670030 33704001 + MGP_LPJ_P0071033 Rgs12 protein_coding protein_coding MGP_LPJ_T0071034.1 MGP_LPJ_G0029373.1 mouse_genomes_project 5 33670451 33720510 + MGP_LPJ_P0071034 Rgs12 protein_coding protein_coding MGP_LPJ_T0071035.1 MGP_LPJ_G0029373.1 mouse_genomes_project 5 33670717 33714282 + MGP_LPJ_P0071035 Rgs12 protein_coding protein_coding MGP_LPJ_T0071036.1 MGP_LPJ_G0029373.1 mouse_genomes_project 5 33679959 33714420 + MGP_LPJ_P0071036 Rgs12 protein_coding protein_coding MGP_LPJ_T0071037.1 MGP_LPJ_G0029373.1 mouse_genomes_project 5 33680086 33720510 + MGP_LPJ_P0071037 Rgs12 protein_coding protein_coding MGP_LPJ_T0071038.1 MGP_LPJ_G0029373.1 mouse_genomes_project 5 33700941 33703491 + Rgs12 protein_coding retained_intron MGP_LPJ_T0071040.1 MGP_LPJ_G0029373.1 mouse_genomes_project 5 33703659 33705165 + Rgs12 protein_coding retained_intron MGP_LPJ_T0071041.1 MGP_LPJ_G0029373.1 mouse_genomes_project 5 33705169 33710919 + MGP_LPJ_P0071041 Rgs12 protein_coding protein_coding MGP_LPJ_T0071042.1 MGP_LPJ_G0029373.1 mouse_genomes_project 5 33707731 33712881 + Rgs12 protein_coding processed_transcript MGP_LPJ_T0071043.1 MGP_LPJ_G0029373.1 mouse_genomes_project 5 33707798 33720511 + MGP_LPJ_P0071043 Rgs12 protein_coding protein_coding MGP_LPJ_T0008155.1 MGP_LPJ_G0006649.1 mouse_genomes_project 5 59810834 59834868 - 4933402J10Rik lincRNA lincRNA MGP_LPJ_T0008156.1 MGP_LPJ_G0006649.1 mouse_genomes_project 5 59810839 59834862 - 4933402J10Rik lincRNA lincRNA MGP_LPJ_T0001632.1 MGP_LPJ_G0001546.1 mouse_genomes_project 5 57292471 57292626 + TEC TEC MGP_LPJ_T0075917.1 MGP_LPJ_G0030322.1 mouse_genomes_project 5 158158607 158185310 - MGP_LPJ_P0075917 Vmn2r18 protein_coding protein_coding MGP_LPJ_T0001727.1 MGP_LPJ_G0001639.1 mouse_genomes_project 5 75708498 75708949 - TEC TEC MGP_LPJ_T0014910.1 MGP_LPJ_G0013001.1 mouse_genomes_project 5 40970635 40971911 - processed_pseudogene processed_pseudogene MGP_LPJ_T0075443.1 MGP_LPJ_G0030225.1 mouse_genomes_project 5 149081884 149090426 - MGP_LPJ_P0075443 Rbak protein_coding protein_coding MGP_LPJ_T0075444.1 MGP_LPJ_G0030225.1 mouse_genomes_project 5 149081884 149090471 - MGP_LPJ_P0075444 Rbak protein_coding protein_coding MGP_LPJ_T0075445.1 MGP_LPJ_G0030225.1 mouse_genomes_project 5 149081885 149086433 - Rbak protein_coding retained_intron MGP_LPJ_T0075446.1 MGP_LPJ_G0030225.1 mouse_genomes_project 5 149088664 149090428 - Rbak protein_coding retained_intron MGP_LPJ_T0014948.1 MGP_LPJ_G0013039.1 mouse_genomes_project 5 60460485 60460906 + processed_pseudogene processed_pseudogene MGP_LPJ_T0071249.1 MGP_LPJ_G0029411.1 mouse_genomes_project 5 37177892 37181044 + MGP_LPJ_P0071249 Drd5 protein_coding protein_coding MGP_LPJ_T0001904.1 MGP_LPJ_G0001814.1 mouse_genomes_project 5 139124218 139127885 - TEC TEC MGP_LPJ_T0070722.1 MGP_LPJ_G0029328.1 mouse_genomes_project 5 29989762 30000823 - MGP_LPJ_P0070722 Supt7l protein_coding protein_coding MGP_LPJ_T0070723.1 MGP_LPJ_G0029328.1 mouse_genomes_project 5 29990590 30000920 - MGP_LPJ_P0070723 Supt7l protein_coding protein_coding MGP_LPJ_T0070724.1 MGP_LPJ_G0029328.1 mouse_genomes_project 5 29995680 30001996 - Supt7l protein_coding retained_intron MGP_LPJ_T0070725.1 MGP_LPJ_G0029328.1 mouse_genomes_project 5 29999651 30000891 - Supt7l protein_coding retained_intron MGP_LPJ_T0075149.1 MGP_LPJ_G0030164.1 mouse_genomes_project 5 143530419 143531727 + MGP_LPJ_P0075149 Mblac1 protein_coding protein_coding MGP_LPJ_T0072738.1 MGP_LPJ_G0029711.1 mouse_genomes_project 5 106414915 106426054 + MGP_LPJ_P0072738 Dspp protein_coding protein_coding MGP_LPJ_T0070953.1 MGP_LPJ_G0029364.1 mouse_genomes_project 5 33024650 33143441 + MGP_LPJ_P0070953 Fam193a protein_coding protein_coding MGP_LPJ_T0070954.1 MGP_LPJ_G0029364.1 mouse_genomes_project 5 33068221 33143417 + MGP_LPJ_P0070954 Fam193a protein_coding unknown_likely_coding MGP_LPJ_T0070955.1 MGP_LPJ_G0029364.1 mouse_genomes_project 5 33084037 33142732 + MGP_LPJ_P0070955 Fam193a protein_coding protein_coding MGP_LPJ_T0070956.1 MGP_LPJ_G0029364.1 mouse_genomes_project 5 33088919 33101301 + MGP_LPJ_P0070956 Fam193a protein_coding protein_coding MGP_LPJ_T0070957.1 MGP_LPJ_G0029364.1 mouse_genomes_project 5 33101394 33116088 + MGP_LPJ_P0070957 Fam193a protein_coding protein_coding MGP_LPJ_T0070958.1 MGP_LPJ_G0029364.1 mouse_genomes_project 5 33123126 33134682 + MGP_LPJ_P0070958 Fam193a protein_coding protein_coding MGP_LPJ_T0070565.1 MGP_LPJ_G0029306.1 mouse_genomes_project 5 29478894 29483320 + MGP_LPJ_P0070565 Atraid protein_coding protein_coding MGP_LPJ_T0070566.1 MGP_LPJ_G0029306.1 mouse_genomes_project 5 29478903 29485084 + Atraid protein_coding retained_intron MGP_LPJ_T0070567.1 MGP_LPJ_G0029306.1 mouse_genomes_project 5 29479217 29485090 + MGP_LPJ_P0070567 Atraid protein_coding protein_coding MGP_LPJ_T0070568.1 MGP_LPJ_G0029306.1 mouse_genomes_project 5 29479220 29485088 + MGP_LPJ_P0070568 Atraid protein_coding protein_coding MGP_LPJ_T0070569.1 MGP_LPJ_G0029306.1 mouse_genomes_project 5 29479230 29484460 + MGP_LPJ_P0070569 Atraid protein_coding protein_coding MGP_LPJ_T0070570.1 MGP_LPJ_G0029306.1 mouse_genomes_project 5 29479241 29485085 + MGP_LPJ_P0070570 Atraid protein_coding nonsense_mediated_decay MGP_LPJ_T0070571.1 MGP_LPJ_G0029306.1 mouse_genomes_project 5 29479304 29484811 + MGP_LPJ_P0070571 Atraid protein_coding protein_coding MGP_LPJ_T0070572.1 MGP_LPJ_G0029306.1 mouse_genomes_project 5 29484340 29485090 + Atraid protein_coding processed_transcript MGP_LPJ_T0073206.1 MGP_LPJ_G0029815.1 mouse_genomes_project 5 116271058 116276324 - MGP_LPJ_P0073206 Crybb3 protein_coding protein_coding MGP_LPJ_T0073207.1 MGP_LPJ_G0029815.1 mouse_genomes_project 5 116271058 116275881 - MGP_LPJ_P0073207 Crybb3 protein_coding protein_coding MGP_LPJ_T0073208.1 MGP_LPJ_G0029815.1 mouse_genomes_project 5 116271058 116276798 - MGP_LPJ_P0073208 Crybb3 protein_coding protein_coding MGP_LPJ_T0073209.1 MGP_LPJ_G0029815.1 mouse_genomes_project 5 116271062 116276324 - MGP_LPJ_P0073209 Crybb3 protein_coding protein_coding MGP_LPJ_T0073210.1 MGP_LPJ_G0029815.1 mouse_genomes_project 5 116271066 116276797 - MGP_LPJ_P0073210 Crybb3 protein_coding protein_coding MGP_LPJ_T0073211.1 MGP_LPJ_G0029815.1 mouse_genomes_project 5 116272243 116275605 - Crybb3 protein_coding retained_intron MGP_LPJ_T0073212.1 MGP_LPJ_G0029815.1 mouse_genomes_project 5 116272508 116275880 - Crybb3 protein_coding retained_intron MGP_LPJ_T0073213.1 MGP_LPJ_G0029815.1 mouse_genomes_project 5 116273604 116275867 - MGP_LPJ_P0073213 Crybb3 protein_coding protein_coding MGP_LPJ_T0073214.1 MGP_LPJ_G0029815.1 mouse_genomes_project 5 116273687 116276793 - MGP_LPJ_P0073214 Crybb3 protein_coding protein_coding MGP_LPJ_T0073215.1 MGP_LPJ_G0029815.1 mouse_genomes_project 5 116273753 116276794 - Crybb3 protein_coding processed_transcript MGP_LPJ_T0073216.1 MGP_LPJ_G0029815.1 mouse_genomes_project 5 116274970 116276273 - MGP_LPJ_P0073216 Crybb3 protein_coding protein_coding MGP_LPJ_T0070317.1 MGP_LPJ_G0029256.1 mouse_genomes_project 5 23028483 23288803 - MGP_LPJ_P0070317 Prkag2 protein_coding protein_coding MGP_LPJ_T0070318.1 MGP_LPJ_G0029256.1 mouse_genomes_project 5 23028487 23178629 - MGP_LPJ_P0070318 Prkag2 protein_coding protein_coding MGP_LPJ_T0070319.1 MGP_LPJ_G0029256.1 mouse_genomes_project 5 23028487 23075904 - MGP_LPJ_P0070319 Prkag2 protein_coding protein_coding MGP_LPJ_T0070320.1 MGP_LPJ_G0029256.1 mouse_genomes_project 5 23029515 23038816 - Prkag2 protein_coding retained_intron MGP_LPJ_T0070321.1 MGP_LPJ_G0029256.1 mouse_genomes_project 5 23036314 23075944 - MGP_LPJ_P0070321 Prkag2 protein_coding protein_coding MGP_LPJ_T0070322.1 MGP_LPJ_G0029256.1 mouse_genomes_project 5 23038599 23070155 - MGP_LPJ_P0070322 Prkag2 protein_coding protein_coding MGP_LPJ_T0070323.1 MGP_LPJ_G0029256.1 mouse_genomes_project 5 23043918 23058717 - Prkag2 protein_coding retained_intron MGP_LPJ_T0070324.1 MGP_LPJ_G0029256.1 mouse_genomes_project 5 23044444 23075887 - Prkag2 protein_coding retained_intron MGP_LPJ_T0070325.1 MGP_LPJ_G0029256.1 mouse_genomes_project 5 23058725 23076410 - MGP_LPJ_P0070325 Prkag2 protein_coding protein_coding MGP_LPJ_T0070326.1 MGP_LPJ_G0029256.1 mouse_genomes_project 5 23073663 23075885 - Prkag2 protein_coding processed_transcript MGP_LPJ_T0073220.1 MGP_LPJ_G0029818.1 mouse_genomes_project 5 116452714 116528614 - MGP_LPJ_P0073220 Sgsm1 protein_coding protein_coding MGP_LPJ_T0073221.1 MGP_LPJ_G0029818.1 mouse_genomes_project 5 116452723 116498399 - MGP_LPJ_P0073221 Sgsm1 protein_coding protein_coding MGP_LPJ_T0073222.1 MGP_LPJ_G0029818.1 mouse_genomes_project 5 116468934 116498399 - Sgsm1 protein_coding processed_transcript MGP_LPJ_T0073223.1 MGP_LPJ_G0029818.1 mouse_genomes_project 5 116469572 116528605 - Sgsm1 protein_coding processed_transcript MGP_LPJ_T0073224.1 MGP_LPJ_G0029818.1 mouse_genomes_project 5 116479806 116528567 - MGP_LPJ_P0073224 Sgsm1 protein_coding protein_coding MGP_LPJ_T0073225.1 MGP_LPJ_G0029818.1 mouse_genomes_project 5 116480419 116528525 - MGP_LPJ_P0073225 Sgsm1 protein_coding protein_coding MGP_LPJ_T0073226.1 MGP_LPJ_G0029818.1 mouse_genomes_project 5 116491715 116498385 - MGP_LPJ_P0073226 Sgsm1 protein_coding protein_coding MGP_LPJ_T0073227.1 MGP_LPJ_G0029818.1 mouse_genomes_project 5 116493667 116497118 - Sgsm1 protein_coding retained_intron MGP_LPJ_T0073228.1 MGP_LPJ_G0029818.1 mouse_genomes_project 5 116497389 116500690 - Sgsm1 protein_coding retained_intron MGP_LPJ_T0073229.1 MGP_LPJ_G0029818.1 mouse_genomes_project 5 116503326 116528548 - Sgsm1 protein_coding retained_intron MGP_LPJ_T0008292.1 MGP_LPJ_G0006750.1 mouse_genomes_project 5 113691810 113693404 + Gm42595 lincRNA lincRNA MGP_LPJ_T0008349.1 MGP_LPJ_G0006786.1 mouse_genomes_project 5 122668581 122677503 + 4930413E15Rik lincRNA lincRNA MGP_LPJ_T0101663.1 MGP_LPJ_G0039710.1 mouse_genomes_project 5 93480057 93483910 + unitary_pseudogene retained_intron MGP_LPJ_T0101664.1 MGP_LPJ_G0039710.1 mouse_genomes_project 5 93480558 93487857 + unitary_pseudogene processed_transcript MGP_LPJ_T0101665.1 MGP_LPJ_G0039710.1 mouse_genomes_project 5 93480572 93488776 + unitary_pseudogene processed_transcript MGP_LPJ_T0101666.1 MGP_LPJ_G0039710.1 mouse_genomes_project 5 93481001 93490269 + unitary_pseudogene unitary_pseudogene MGP_LPJ_T0071786.1 MGP_LPJ_G0029500.1 mouse_genomes_project 5 68307532 68434174 + MGP_LPJ_P0071786 Grxcr1 protein_coding protein_coding MGP_LPJ_T0072825.1 MGP_LPJ_G0029734.1 mouse_genomes_project 5 109704739 109902429 - MGP_LPJ_P0072825 Tgfbr3 protein_coding protein_coding MGP_LPJ_T0072826.1 MGP_LPJ_G0029734.1 mouse_genomes_project 5 109707481 109801843 - Tgfbr3 protein_coding processed_transcript MGP_LPJ_T0072827.1 MGP_LPJ_G0029734.1 mouse_genomes_project 5 109722431 109737979 - MGP_LPJ_P0072827 Tgfbr3 protein_coding protein_coding MGP_LPJ_T0072828.1 MGP_LPJ_G0029734.1 mouse_genomes_project 5 109752991 109902395 - Tgfbr3 protein_coding retained_intron MGP_LPJ_T0102191.1 MGP_LPJ_G0040228.1 mouse_genomes_project 5 112382035 112384248 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0004808.1 MGP_LPJ_G0004148.1 mouse_genomes_project 5 118119721 118120941 - 4930515G01Rik antisense antisense MGP_LPJ_T0073003.1 MGP_LPJ_G0029777.1 mouse_genomes_project 5 113017597 113033226 - MGP_LPJ_P0073003 unknown_likely_coding unknown_likely_coding MGP_LPJ_T0074332.1 MGP_LPJ_G0030013.1 mouse_genomes_project 5 129755692 129756926 + MGP_LPJ_P0074332 Gm10382 protein_coding protein_coding MGP_LPJ_T0072809.1 MGP_LPJ_G0029732.1 mouse_genomes_project 5 109412904 109473355 - MGP_LPJ_P0072809 Hfm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0072810.1 MGP_LPJ_G0029732.1 mouse_genomes_project 5 109412906 109507350 - MGP_LPJ_P0072810 Hfm1 protein_coding protein_coding MGP_LPJ_T0072811.1 MGP_LPJ_G0029732.1 mouse_genomes_project 5 109412909 109506919 - MGP_LPJ_P0072811 Hfm1 protein_coding protein_coding MGP_LPJ_T0072812.1 MGP_LPJ_G0029732.1 mouse_genomes_project 5 109413371 109507897 - MGP_LPJ_P0072812 Hfm1 protein_coding unknown_likely_coding MGP_LPJ_T0072813.1 MGP_LPJ_G0029732.1 mouse_genomes_project 5 109414274 109467979 - MGP_LPJ_P0072813 Hfm1 protein_coding protein_coding MGP_LPJ_T0072814.1 MGP_LPJ_G0029732.1 mouse_genomes_project 5 109480863 109507287 - Hfm1 protein_coding retained_intron MGP_LPJ_T0072815.1 MGP_LPJ_G0029732.1 mouse_genomes_project 5 109480863 109506919 - MGP_LPJ_P0072815 Hfm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0072816.1 MGP_LPJ_G0029732.1 mouse_genomes_project 5 109481047 109506881 - MGP_LPJ_P0072816 Hfm1 protein_coding protein_coding MGP_LPJ_T0072246.1 MGP_LPJ_G0029593.1 mouse_genomes_project 5 89181617 89198735 + MGP_LPJ_P0072246 Csn1s2b protein_coding protein_coding MGP_LPJ_T0072247.1 MGP_LPJ_G0029593.1 mouse_genomes_project 5 89181658 89198726 + MGP_LPJ_P0072247 Csn1s2b protein_coding protein_coding MGP_LPJ_T0072248.1 MGP_LPJ_G0029593.1 mouse_genomes_project 5 89181659 89192739 + MGP_LPJ_P0072248 Csn1s2b protein_coding protein_coding MGP_LPJ_T0072249.1 MGP_LPJ_G0029593.1 mouse_genomes_project 5 89181662 89198630 + MGP_LPJ_P0072249 Csn1s2b protein_coding protein_coding MGP_LPJ_T0072250.1 MGP_LPJ_G0029593.1 mouse_genomes_project 5 89184872 89186935 + Csn1s2b protein_coding retained_intron MGP_LPJ_T0001590.1 MGP_LPJ_G0001504.1 mouse_genomes_project 5 48081480 48082686 - TEC TEC MGP_LPJ_T0075704.1 MGP_LPJ_G0030287.1 mouse_genomes_project 5 153267578 153279791 - MGP_LPJ_P0075704 Mtif3 protein_coding protein_coding MGP_LPJ_T0075705.1 MGP_LPJ_G0030287.1 mouse_genomes_project 5 153270525 153279793 - MGP_LPJ_P0075705 Mtif3 protein_coding protein_coding MGP_LPJ_T0075706.1 MGP_LPJ_G0030287.1 mouse_genomes_project 5 153271372 153279803 - MGP_LPJ_P0075706 Mtif3 protein_coding protein_coding MGP_LPJ_T0075707.1 MGP_LPJ_G0030287.1 mouse_genomes_project 5 153271372 153279755 - MGP_LPJ_P0075707 Mtif3 protein_coding protein_coding MGP_LPJ_T0075708.1 MGP_LPJ_G0030287.1 mouse_genomes_project 5 153274942 153279749 - MGP_LPJ_P0075708 Mtif3 protein_coding protein_coding MGP_LPJ_T0075709.1 MGP_LPJ_G0030287.1 mouse_genomes_project 5 153274953 153279806 - MGP_LPJ_P0075709 Mtif3 protein_coding protein_coding MGP_LPJ_T0073778.1 MGP_LPJ_G0029929.1 mouse_genomes_project 5 125431510 125455376 - MGP_LPJ_P0073778 Erp29 protein_coding nonsense_mediated_decay MGP_LPJ_T0073781.1 MGP_LPJ_G0029929.1 mouse_genomes_project 5 125443704 125455395 - MGP_LPJ_P0073781 Erp29 protein_coding protein_coding MGP_LPJ_T0073782.1 MGP_LPJ_G0029929.1 mouse_genomes_project 5 125447640 125455385 - MGP_LPJ_P0073782 Erp29 protein_coding protein_coding MGP_LPJ_T0073783.1 MGP_LPJ_G0029929.1 mouse_genomes_project 5 125448125 125455237 - MGP_LPJ_P0073783 Erp29 protein_coding nonsense_mediated_decay MGP_LPJ_T0072866.1 MGP_LPJ_G0029744.1 mouse_genomes_project 5 110349839 110360768 - MGP_LPJ_P0072866 Gfi1 protein_coding protein_coding MGP_LPJ_T0072867.1 MGP_LPJ_G0029744.1 mouse_genomes_project 5 110349839 110359305 - MGP_LPJ_P0072867 Gfi1 protein_coding protein_coding MGP_LPJ_T0072868.1 MGP_LPJ_G0029744.1 mouse_genomes_project 5 110349848 110360768 - MGP_LPJ_P0072868 Gfi1 protein_coding protein_coding MGP_LPJ_T0072869.1 MGP_LPJ_G0029744.1 mouse_genomes_project 5 110350406 110358923 - MGP_LPJ_P0072869 Gfi1 protein_coding protein_coding MGP_LPJ_T0072870.1 MGP_LPJ_G0029744.1 mouse_genomes_project 5 110354774 110360999 - MGP_LPJ_P0072870 Gfi1 protein_coding protein_coding MGP_LPJ_T0071523.1 MGP_LPJ_G0029457.1 mouse_genomes_project 5 53521891 53662719 + MGP_LPJ_P0071523 Stim2 protein_coding protein_coding MGP_LPJ_T0071524.1 MGP_LPJ_G0029457.1 mouse_genomes_project 5 53523806 53661321 + MGP_LPJ_P0071524 Stim2 protein_coding protein_coding MGP_LPJ_T0071525.1 MGP_LPJ_G0029457.1 mouse_genomes_project 5 53657518 53660249 + Stim2 protein_coding retained_intron MGP_LPJ_T0075382.1 MGP_LPJ_G0030214.1 mouse_genomes_project 5 148316309 148318920 + MGP_LPJ_P0075382 Ap5z1 protein_coding protein_coding MGP_LPJ_T0075383.1 MGP_LPJ_G0030214.1 mouse_genomes_project 5 148316364 148328992 + Ap5z1 protein_coding processed_transcript MGP_LPJ_T0075384.1 MGP_LPJ_G0030214.1 mouse_genomes_project 5 148316409 148323738 + MGP_LPJ_P0075384 Ap5z1 protein_coding nonsense_mediated_decay MGP_LPJ_T0075385.1 MGP_LPJ_G0030214.1 mouse_genomes_project 5 148316419 148335484 + MGP_LPJ_P0075385 Ap5z1 protein_coding protein_coding MGP_LPJ_T0075386.1 MGP_LPJ_G0030214.1 mouse_genomes_project 5 148316426 148334576 + Ap5z1 protein_coding retained_intron MGP_LPJ_T0075387.1 MGP_LPJ_G0030214.1 mouse_genomes_project 5 148316439 148334828 + MGP_LPJ_P0075387 Ap5z1 protein_coding protein_coding MGP_LPJ_T0075388.1 MGP_LPJ_G0030214.1 mouse_genomes_project 5 148330872 148332527 + Ap5z1 protein_coding retained_intron MGP_LPJ_T0075722.1 MGP_LPJ_G0030294.1 mouse_genomes_project 5 153679095 153758816 - MGP_LPJ_P0075722 Flt3 protein_coding protein_coding MGP_LPJ_T0075723.1 MGP_LPJ_G0030294.1 mouse_genomes_project 5 153715293 153758816 - Flt3 protein_coding processed_transcript MGP_LPJ_T0010702.1 MGP_LPJ_G0008820.1 mouse_genomes_project 5 64143840 64143936 - Gm22395 miRNA miRNA MGP_LPJ_T0015129.1 MGP_LPJ_G0013220.1 mouse_genomes_project 5 144158672 144159224 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000002.1 MGP_LPJ_G0000002.1 mouse_genomes_project 5 18635446 18639222 + Gm29254 3prime_overlapping_ncRNA 3prime_overlapping_ncRNA MGP_LPJ_T0000003.1 MGP_LPJ_G0000002.1 mouse_genomes_project 5 18635446 18639219 + Gm29254 3prime_overlapping_ncRNA 3prime_overlapping_ncRNA MGP_LPJ_T0099586.1 MGP_LPJ_G0037849.1 mouse_genomes_project 5 76138622 76138727 - Gm24502 snRNA snRNA MGP_LPJ_T0074331.1 MGP_LPJ_G0030012.1 mouse_genomes_project 5 129751750 129755557 - MGP_LPJ_P0074331 protein_coding protein_coding MGP_LPJ_T0008220.1 MGP_LPJ_G0006701.1 mouse_genomes_project 5 98750109 98752629 + lincRNA lincRNA MGP_LPJ_T0074020.1 MGP_LPJ_G0029963.1 mouse_genomes_project 5 127229017 127243994 + MGP_LPJ_P0074020 Orai1 protein_coding protein_coding MGP_LPJ_T0074021.1 MGP_LPJ_G0029963.1 mouse_genomes_project 5 127229017 127244294 + MGP_LPJ_P0074021 Orai1 protein_coding protein_coding MGP_LPJ_T0074022.1 MGP_LPJ_G0029963.1 mouse_genomes_project 5 127229281 127243328 + Orai1 protein_coding processed_transcript MGP_LPJ_T0071044.1 MGP_LPJ_G0029374.1 mouse_genomes_project 5 33722383 33729305 + MGP_LPJ_P0071044 Hgfac protein_coding protein_coding MGP_LPJ_T0071045.1 MGP_LPJ_G0029374.1 mouse_genomes_project 5 33722451 33729342 + Hgfac protein_coding retained_intron MGP_LPJ_T0071046.1 MGP_LPJ_G0029374.1 mouse_genomes_project 5 33722451 33724563 + MGP_LPJ_P0071046 Hgfac protein_coding protein_coding MGP_LPJ_T0071047.1 MGP_LPJ_G0029374.1 mouse_genomes_project 5 33724487 33726327 + Hgfac protein_coding retained_intron MGP_LPJ_T0071048.1 MGP_LPJ_G0029374.1 mouse_genomes_project 5 33725229 33727844 + MGP_LPJ_P0071048 Hgfac protein_coding protein_coding MGP_LPJ_T0071049.1 MGP_LPJ_G0029374.1 mouse_genomes_project 5 33725706 33726792 + Hgfac protein_coding retained_intron MGP_LPJ_T0071050.1 MGP_LPJ_G0029374.1 mouse_genomes_project 5 33727445 33729287 + Hgfac protein_coding retained_intron MGP_LPJ_T0098647.1 MGP_LPJ_G0036917.1 mouse_genomes_project 5 157165679 157169727 + Gm42531 sense_intronic sense_intronic MGP_LPJ_T0070726.1 MGP_LPJ_G0029329.1 mouse_genomes_project 5 30001183 30003592 + Slc4a1ap protein_coding retained_intron MGP_LPJ_T0070727.1 MGP_LPJ_G0029329.1 mouse_genomes_project 5 30001183 30030189 + MGP_LPJ_P0070727 Slc4a1ap protein_coding protein_coding MGP_LPJ_T0070728.1 MGP_LPJ_G0029329.1 mouse_genomes_project 5 30001185 30008636 + Slc4a1ap protein_coding retained_intron MGP_LPJ_T0070729.1 MGP_LPJ_G0029329.1 mouse_genomes_project 5 30001185 30030495 + MGP_LPJ_P0070729 Slc4a1ap protein_coding protein_coding MGP_LPJ_T0070730.1 MGP_LPJ_G0029329.1 mouse_genomes_project 5 30001200 30030194 + MGP_LPJ_P0070730 Slc4a1ap protein_coding protein_coding MGP_LPJ_T0070731.1 MGP_LPJ_G0029329.1 mouse_genomes_project 5 30001200 30012309 + MGP_LPJ_P0070731 Slc4a1ap protein_coding protein_coding MGP_LPJ_T0070732.1 MGP_LPJ_G0029329.1 mouse_genomes_project 5 30001789 30006415 + Slc4a1ap protein_coding retained_intron MGP_LPJ_T0070733.1 MGP_LPJ_G0029329.1 mouse_genomes_project 5 30006159 30009177 + Slc4a1ap protein_coding retained_intron MGP_LPJ_T0070734.1 MGP_LPJ_G0029329.1 mouse_genomes_project 5 30011621 30030160 + MGP_LPJ_P0070734 Slc4a1ap protein_coding protein_coding MGP_LPJ_T0070735.1 MGP_LPJ_G0029329.1 mouse_genomes_project 5 30019096 30030190 + Slc4a1ap protein_coding retained_intron MGP_LPJ_T0070736.1 MGP_LPJ_G0029329.1 mouse_genomes_project 5 30019285 30030194 + MGP_LPJ_P0070736 Slc4a1ap protein_coding protein_coding MGP_LPJ_T0070737.1 MGP_LPJ_G0029329.1 mouse_genomes_project 5 30019363 30030119 + MGP_LPJ_P0070737 Slc4a1ap protein_coding protein_coding MGP_LPJ_T0070738.1 MGP_LPJ_G0029329.1 mouse_genomes_project 5 30026020 30033011 + Slc4a1ap protein_coding processed_transcript MGP_LPJ_T0073237.1 MGP_LPJ_G0029821.1 mouse_genomes_project 5 116846041 116885487 - MGP_LPJ_P0073237 Cmklr1 protein_coding protein_coding MGP_LPJ_T0073238.1 MGP_LPJ_G0029821.1 mouse_genomes_project 5 116849147 116862746 - MGP_LPJ_P0073238 Cmklr1 protein_coding protein_coding MGP_LPJ_T0073239.1 MGP_LPJ_G0029821.1 mouse_genomes_project 5 116850038 116878733 - MGP_LPJ_P0073239 Cmklr1 protein_coding protein_coding MGP_LPJ_T0073240.1 MGP_LPJ_G0029821.1 mouse_genomes_project 5 116866436 116885457 - Cmklr1 protein_coding processed_transcript MGP_LPJ_T0008286.1 MGP_LPJ_G0006748.1 mouse_genomes_project 5 113403106 113405348 + Gm26711 lincRNA lincRNA MGP_LPJ_T0004667.1 MGP_LPJ_G0004043.1 mouse_genomes_project 5 21211458 21234711 - Gm42948 antisense antisense MGP_LPJ_T0075224.1 MGP_LPJ_G0030179.1 mouse_genomes_project 5 144722676 144758908 + MGP_LPJ_P0075224 Dnaaf5 protein_coding protein_coding MGP_LPJ_T0075225.1 MGP_LPJ_G0030179.1 mouse_genomes_project 5 144740555 144751271 + Dnaaf5 protein_coding processed_transcript MGP_LPJ_T0099569.1 MGP_LPJ_G0037832.1 mouse_genomes_project 5 37585948 37586055 - Gm22779 snRNA snRNA MGP_LPJ_T0004801.1 MGP_LPJ_G0004144.1 mouse_genomes_project 5 115966239 115974648 + 1700095B10Rik antisense antisense MGP_LPJ_T0004802.1 MGP_LPJ_G0004144.1 mouse_genomes_project 5 115966247 115968639 + 1700095B10Rik antisense antisense MGP_LPJ_T0004803.1 MGP_LPJ_G0004144.1 mouse_genomes_project 5 115966256 115974596 + 1700095B10Rik antisense antisense MGP_LPJ_T0004804.1 MGP_LPJ_G0004144.1 mouse_genomes_project 5 115966279 115968890 + 1700095B10Rik antisense antisense MGP_LPJ_T0073602.1 MGP_LPJ_G0029888.1 mouse_genomes_project 5 120939984 120951207 + Wsb2 protein_coding retained_intron MGP_LPJ_T0073603.1 MGP_LPJ_G0029888.1 mouse_genomes_project 5 120939984 120963210 + MGP_LPJ_P0073603 Wsb2 protein_coding protein_coding MGP_LPJ_T0073604.1 MGP_LPJ_G0029888.1 mouse_genomes_project 5 120945477 120955558 + Wsb2 protein_coding processed_transcript MGP_LPJ_T0073605.1 MGP_LPJ_G0029888.1 mouse_genomes_project 5 120947963 120962416 + MGP_LPJ_P0073605 Wsb2 protein_coding protein_coding MGP_LPJ_T0073606.1 MGP_LPJ_G0029888.1 mouse_genomes_project 5 120960261 120962089 + Wsb2 protein_coding retained_intron MGP_LPJ_T0073607.1 MGP_LPJ_G0029888.1 mouse_genomes_project 5 120961059 120962124 + Wsb2 protein_coding retained_intron MGP_LPJ_T0073230.1 MGP_LPJ_G0029819.1 mouse_genomes_project 5 116600443 116600907 + MGP_LPJ_P0073230 Aym1 protein_coding protein_coding MGP_LPJ_T0100824.1 MGP_LPJ_G0039087.1 mouse_genomes_project 5 35444911 35445035 + Gm25767 snoRNA snoRNA MGP_LPJ_T0100868.1 MGP_LPJ_G0039131.1 mouse_genomes_project 5 157317388 157317507 - Gm26013 snoRNA snoRNA MGP_LPJ_T0075191.1 MGP_LPJ_G0030173.1 mouse_genomes_project 5 144151547 144167611 - MGP_LPJ_P0075191 Zfp68 protein_coding protein_coding MGP_LPJ_T0075192.1 MGP_LPJ_G0030173.1 mouse_genomes_project 5 144152880 144167608 - MGP_LPJ_P0075192 Zfp68 protein_coding protein_coding MGP_LPJ_T0075193.1 MGP_LPJ_G0030173.1 mouse_genomes_project 5 144154010 144154952 - Zfp68 protein_coding processed_transcript MGP_LPJ_T0075194.1 MGP_LPJ_G0030173.1 mouse_genomes_project 5 144154014 144167590 - MGP_LPJ_P0075194 Zfp68 protein_coding protein_coding MGP_LPJ_T0075195.1 MGP_LPJ_G0030173.1 mouse_genomes_project 5 144160002 144167503 - MGP_LPJ_P0075195 Zfp68 protein_coding protein_coding MGP_LPJ_T0075196.1 MGP_LPJ_G0030173.1 mouse_genomes_project 5 144164047 144167588 - Zfp68 protein_coding retained_intron MGP_LPJ_T0008299.1 MGP_LPJ_G0006754.1 mouse_genomes_project 5 114828240 114859595 - E130006D01Rik lincRNA lincRNA MGP_LPJ_T0008300.1 MGP_LPJ_G0006754.1 mouse_genomes_project 5 114828259 114859617 - E130006D01Rik lincRNA lincRNA MGP_LPJ_T0008301.1 MGP_LPJ_G0006754.1 mouse_genomes_project 5 114828366 114859592 - E130006D01Rik lincRNA lincRNA MGP_LPJ_T0098637.1 MGP_LPJ_G0036910.1 mouse_genomes_project 5 141987700 141995782 - Gm20485 sense_intronic sense_intronic MGP_LPJ_T0018156.1 MGP_LPJ_G0015534.1 mouse_genomes_project 5 155467440 155490288 - Gm15411 processed_transcript lincRNA MGP_LPJ_T0018157.1 MGP_LPJ_G0015534.1 mouse_genomes_project 5 155471749 155490259 - Gm15411 processed_transcript lincRNA MGP_LPJ_T0018158.1 MGP_LPJ_G0015534.1 mouse_genomes_project 5 155488271 155490288 - Gm15411 processed_transcript retained_intron MGP_LPJ_T0001465.1 MGP_LPJ_G0001382.1 mouse_genomes_project 5 607921 612625 - TEC TEC MGP_LPJ_T0004796.1 MGP_LPJ_G0004139.1 mouse_genomes_project 5 113344102 113346100 - Gm15792 antisense antisense MGP_LPJ_T0071384.1 MGP_LPJ_G0029437.1 mouse_genomes_project 5 44903091 45061873 - MGP_LPJ_P0071384 Lcorl protein_coding protein_coding MGP_LPJ_T0071385.1 MGP_LPJ_G0029437.1 mouse_genomes_project 5 44903094 45061725 - MGP_LPJ_P0071385 Lcorl protein_coding protein_coding MGP_LPJ_T0071387.1 MGP_LPJ_G0029437.1 mouse_genomes_project 5 44906360 45057710 - MGP_LPJ_P0071387 Lcorl protein_coding protein_coding MGP_LPJ_T0071388.1 MGP_LPJ_G0029437.1 mouse_genomes_project 5 44907356 44929218 - Lcorl protein_coding processed_transcript MGP_LPJ_T0071389.1 MGP_LPJ_G0029437.1 mouse_genomes_project 5 44925581 44933493 - Lcorl protein_coding retained_intron MGP_LPJ_T0071390.1 MGP_LPJ_G0029437.1 mouse_genomes_project 5 44940682 45061755 - MGP_LPJ_P0071390 Lcorl protein_coding protein_coding MGP_LPJ_T0071391.1 MGP_LPJ_G0029437.1 mouse_genomes_project 5 44954480 45061725 - MGP_LPJ_P0071391 Lcorl protein_coding protein_coding MGP_LPJ_T0071392.1 MGP_LPJ_G0029437.1 mouse_genomes_project 5 44954501 45061739 - MGP_LPJ_P0071392 Lcorl protein_coding nonsense_mediated_decay MGP_LPJ_T0071393.1 MGP_LPJ_G0029437.1 mouse_genomes_project 5 44980862 45061759 - Lcorl protein_coding processed_transcript MGP_LPJ_T0071394.1 MGP_LPJ_G0029437.1 mouse_genomes_project 5 44982605 45061873 - Lcorl protein_coding retained_intron MGP_LPJ_T0071395.1 MGP_LPJ_G0029437.1 mouse_genomes_project 5 44982775 45061746 - MGP_LPJ_P0071395 Lcorl protein_coding protein_coding MGP_LPJ_T0071294.1 MGP_LPJ_G0029421.1 mouse_genomes_project 5 42291024 42358085 + MGP_LPJ_P0071294 Cpeb2 protein_coding protein_coding MGP_LPJ_T0071295.1 MGP_LPJ_G0029421.1 mouse_genomes_project 5 42291317 42353800 + MGP_LPJ_P0071295 Cpeb2 protein_coding protein_coding MGP_LPJ_T0071296.1 MGP_LPJ_G0029421.1 mouse_genomes_project 5 42291781 42295774 + Cpeb2 protein_coding retained_intron MGP_LPJ_T0071297.1 MGP_LPJ_G0029421.1 mouse_genomes_project 5 42292892 42349064 + MGP_LPJ_P0071297 Cpeb2 protein_coding protein_coding MGP_LPJ_T0071298.1 MGP_LPJ_G0029421.1 mouse_genomes_project 5 42292904 42293740 + Cpeb2 protein_coding processed_transcript MGP_LPJ_T0071299.1 MGP_LPJ_G0029421.1 mouse_genomes_project 5 42295169 42304285 + Cpeb2 protein_coding processed_transcript MGP_LPJ_T0010688.1 MGP_LPJ_G0008806.1 mouse_genomes_project 5 22737214 22737312 + Mir671 miRNA miRNA MGP_LPJ_T0001921.1 MGP_LPJ_G0001831.1 mouse_genomes_project 5 147077165 147077846 - TEC TEC MGP_LPJ_T0001789.1 MGP_LPJ_G0001701.1 mouse_genomes_project 5 115516533 115516900 - TEC TEC MGP_LPJ_T0004727.1 MGP_LPJ_G0004091.1 mouse_genomes_project 5 66863906 66917156 - Uchl1os antisense antisense MGP_LPJ_T0004728.1 MGP_LPJ_G0004091.1 mouse_genomes_project 5 66896632 66916691 - Uchl1os antisense antisense MGP_LPJ_T0072928.1 MGP_LPJ_G0029755.1 mouse_genomes_project 5 111126964 111128169 - MGP_LPJ_P0072928 Atp5k protein_coding protein_coding MGP_LPJ_T0072929.1 MGP_LPJ_G0029755.1 mouse_genomes_project 5 111126964 111128169 - MGP_LPJ_P0072929 Atp5k protein_coding protein_coding MGP_LPJ_T0072930.1 MGP_LPJ_G0029755.1 mouse_genomes_project 5 111126966 111128118 - Atp5k protein_coding retained_intron MGP_LPJ_T0008367.1 MGP_LPJ_G0006801.1 mouse_genomes_project 5 127355924 127357913 + Gm38102 lincRNA lincRNA MGP_LPJ_T0008371.1 MGP_LPJ_G0006801.1 mouse_genomes_project 5 127357743 127359678 + Gm38102 lincRNA lincRNA MGP_LPJ_T0102173.1 MGP_LPJ_G0040210.1 mouse_genomes_project 5 15009347 15014129 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0001859.1 MGP_LPJ_G0001770.1 mouse_genomes_project 5 131772598 131773686 + TEC TEC MGP_LPJ_T0070122.1 MGP_LPJ_G0029221.1 mouse_genomes_project 5 19718085 19741230 + MGP_LPJ_P0070122 Pmpcb protein_coding protein_coding MGP_LPJ_T0070123.1 MGP_LPJ_G0029221.1 mouse_genomes_project 5 19719986 19741225 + Pmpcb protein_coding retained_intron MGP_LPJ_T0070124.1 MGP_LPJ_G0029221.1 mouse_genomes_project 5 19721726 19723919 + Pmpcb protein_coding retained_intron MGP_LPJ_T0070125.1 MGP_LPJ_G0029221.1 mouse_genomes_project 5 19725589 19726389 + Pmpcb protein_coding retained_intron MGP_LPJ_T0070126.1 MGP_LPJ_G0029221.1 mouse_genomes_project 5 19740591 19741219 + Pmpcb protein_coding retained_intron MGP_LPJ_T0070127.1 MGP_LPJ_G0029221.1 mouse_genomes_project 5 19740717 19741225 + MGP_LPJ_P0070127 Pmpcb protein_coding nonsense_mediated_decay MGP_LPJ_T0070128.1 MGP_LPJ_G0029221.1 mouse_genomes_project 5 19740853 19741219 + Pmpcb protein_coding retained_intron MGP_LPJ_T0001474.1 MGP_LPJ_G0001391.1 mouse_genomes_project 5 6138252 6138483 + TEC TEC MGP_LPJ_T0001603.1 MGP_LPJ_G0001517.1 mouse_genomes_project 5 48375829 48378726 - TEC TEC MGP_LPJ_T0008061.1 MGP_LPJ_G0006583.1 mouse_genomes_project 5 13671907 13681424 - Gm3510 lincRNA lincRNA MGP_LPJ_T0071545.1 MGP_LPJ_G0029463.1 mouse_genomes_project 5 63837668 63925462 + MGP_LPJ_P0071545 0610040J01Rik protein_coding protein_coding MGP_LPJ_T0071546.1 MGP_LPJ_G0029463.1 mouse_genomes_project 5 63837825 63924404 + MGP_LPJ_P0071546 0610040J01Rik protein_coding protein_coding MGP_LPJ_T0071547.1 MGP_LPJ_G0029463.1 mouse_genomes_project 5 63900052 63924103 + MGP_LPJ_P0071547 0610040J01Rik protein_coding protein_coding MGP_LPJ_T0071548.1 MGP_LPJ_G0029463.1 mouse_genomes_project 5 63901219 63924366 + MGP_LPJ_P0071548 0610040J01Rik protein_coding protein_coding MGP_LPJ_T0074834.1 MGP_LPJ_G0030104.1 mouse_genomes_project 5 141168334 141174751 + MGP_LPJ_P0074834 Polr2j protein_coding protein_coding MGP_LPJ_T0074835.1 MGP_LPJ_G0030104.1 mouse_genomes_project 5 141168334 141174527 + MGP_LPJ_P0074835 Polr2j protein_coding protein_coding MGP_LPJ_T0074836.1 MGP_LPJ_G0030104.1 mouse_genomes_project 5 141168405 141174740 + MGP_LPJ_P0074836 Polr2j protein_coding protein_coding MGP_LPJ_T0004716.1 MGP_LPJ_G0004080.1 mouse_genomes_project 5 47255477 47258120 - 4930518C09Rik antisense antisense MGP_LPJ_T0074109.1 MGP_LPJ_G0029979.1 mouse_genomes_project 5 127989665 128020076 - MGP_LPJ_P0074109 Zcchc8 protein_coding protein_coding MGP_LPJ_T0074110.1 MGP_LPJ_G0029979.1 mouse_genomes_project 5 127989673 128020020 - MGP_LPJ_P0074110 Zcchc8 protein_coding protein_coding MGP_LPJ_T0074111.1 MGP_LPJ_G0029979.1 mouse_genomes_project 5 127991169 127995604 - Zcchc8 protein_coding retained_intron MGP_LPJ_T0074112.1 MGP_LPJ_G0029979.1 mouse_genomes_project 5 127996666 128018479 - MGP_LPJ_P0074112 Zcchc8 protein_coding nonsense_mediated_decay MGP_LPJ_T0074113.1 MGP_LPJ_G0029979.1 mouse_genomes_project 5 127996683 128000628 - Zcchc8 protein_coding retained_intron MGP_LPJ_T0074114.1 MGP_LPJ_G0029979.1 mouse_genomes_project 5 128000433 128007310 - MGP_LPJ_P0074114 Zcchc8 protein_coding protein_coding MGP_LPJ_T0074115.1 MGP_LPJ_G0029979.1 mouse_genomes_project 5 128001340 128019799 - MGP_LPJ_P0074115 Zcchc8 protein_coding nonsense_mediated_decay MGP_LPJ_T0074116.1 MGP_LPJ_G0029979.1 mouse_genomes_project 5 128002881 128019838 - MGP_LPJ_P0074116 Zcchc8 protein_coding nonsense_mediated_decay MGP_LPJ_T0074117.1 MGP_LPJ_G0029979.1 mouse_genomes_project 5 128007318 128019750 - MGP_LPJ_P0074117 Zcchc8 protein_coding protein_coding MGP_LPJ_T0102199.1 MGP_LPJ_G0040236.1 mouse_genomes_project 5 151009976 151011624 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0070004.1 MGP_LPJ_G0029197.1 mouse_genomes_project 5 6671206 6946459 - MGP_LPJ_P0070004 Grm3 protein_coding protein_coding MGP_LPJ_T0071999.1 MGP_LPJ_G0029540.1 mouse_genomes_project 5 76525273 76573961 - MGP_LPJ_P0071999 Kdr protein_coding protein_coding MGP_LPJ_T0072000.1 MGP_LPJ_G0029540.1 mouse_genomes_project 5 76551610 76573961 - Kdr protein_coding retained_intron MGP_LPJ_T0072001.1 MGP_LPJ_G0029540.1 mouse_genomes_project 5 76555489 76573961 - Kdr protein_coding retained_intron MGP_LPJ_T0004911.1 MGP_LPJ_G0004220.1 mouse_genomes_project 5 153571924 153616918 - 2210019I11Rik antisense antisense MGP_LPJ_T0004912.1 MGP_LPJ_G0004220.1 mouse_genomes_project 5 153574131 153616899 - 2210019I11Rik antisense antisense MGP_LPJ_T0004913.1 MGP_LPJ_G0004220.1 mouse_genomes_project 5 153582037 153616392 - 2210019I11Rik antisense antisense MGP_LPJ_T0073706.1 MGP_LPJ_G0029910.1 mouse_genomes_project 5 124454868 124470669 + MGP_LPJ_P0073706 Ddx54 protein_coding protein_coding MGP_LPJ_T0073707.1 MGP_LPJ_G0029910.1 mouse_genomes_project 5 124455256 124469704 + Ddx54 protein_coding retained_intron MGP_LPJ_T0073708.1 MGP_LPJ_G0029910.1 mouse_genomes_project 5 124460986 124463881 + Ddx54 protein_coding retained_intron MGP_LPJ_T0073709.1 MGP_LPJ_G0029910.1 mouse_genomes_project 5 124463409 124463880 + Ddx54 protein_coding retained_intron MGP_LPJ_T0001513.1 MGP_LPJ_G0001429.1 mouse_genomes_project 5 26519637 26520002 - TEC TEC MGP_LPJ_T0014816.1 MGP_LPJ_G0012907.1 mouse_genomes_project 5 11458852 11459363 + processed_pseudogene processed_pseudogene MGP_LPJ_T0071324.1 MGP_LPJ_G0029427.1 mouse_genomes_project 5 43085067 43087989 - MGP_LPJ_P0071324 Fgfbp1 protein_coding protein_coding MGP_LPJ_T0071325.1 MGP_LPJ_G0029427.1 mouse_genomes_project 5 43085069 43087974 - MGP_LPJ_P0071325 Fgfbp1 protein_coding protein_coding MGP_LPJ_T0071326.1 MGP_LPJ_G0029427.1 mouse_genomes_project 5 43085072 43087263 - MGP_LPJ_P0071326 Fgfbp1 protein_coding protein_coding MGP_LPJ_T0004914.1 MGP_LPJ_G0004221.1 mouse_genomes_project 5 153757868 153760244 + Gm26597 antisense antisense MGP_LPJ_T0001687.1 MGP_LPJ_G0001600.1 mouse_genomes_project 5 67174084 67176787 + TEC TEC MGP_LPJ_T0001816.1 MGP_LPJ_G0001728.1 mouse_genomes_project 5 122292015 122294433 + TEC TEC MGP_LPJ_T0101349.1 MGP_LPJ_G0039553.1 mouse_genomes_project 5 27584189 27585031 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0010692.1 MGP_LPJ_G0008810.1 mouse_genomes_project 5 30147228 30147338 - Mir3473e miRNA miRNA MGP_LPJ_T0075138.1 MGP_LPJ_G0030162.1 mouse_genomes_project 5 143514559 143523159 - MGP_LPJ_P0075138 Taf6 protein_coding protein_coding MGP_LPJ_T0075139.1 MGP_LPJ_G0030162.1 mouse_genomes_project 5 143514559 143523384 - MGP_LPJ_P0075139 Taf6 protein_coding protein_coding MGP_LPJ_T0075140.1 MGP_LPJ_G0030162.1 mouse_genomes_project 5 143514562 143523138 - MGP_LPJ_P0075140 Taf6 protein_coding protein_coding MGP_LPJ_T0075141.1 MGP_LPJ_G0030162.1 mouse_genomes_project 5 143514570 143523154 - MGP_LPJ_P0075141 Taf6 protein_coding nonsense_mediated_decay MGP_LPJ_T0075142.1 MGP_LPJ_G0030162.1 mouse_genomes_project 5 143516088 143517409 - Taf6 protein_coding retained_intron MGP_LPJ_T0075143.1 MGP_LPJ_G0030162.1 mouse_genomes_project 5 143518615 143523159 - MGP_LPJ_P0075143 Taf6 protein_coding protein_coding MGP_LPJ_T0075144.1 MGP_LPJ_G0030162.1 mouse_genomes_project 5 143519855 143523148 - MGP_LPJ_P0075144 Taf6 protein_coding protein_coding MGP_LPJ_T0075145.1 MGP_LPJ_G0030162.1 mouse_genomes_project 5 143522010 143523149 - Taf6 protein_coding processed_transcript MGP_LPJ_T0004908.1 MGP_LPJ_G0004218.1 mouse_genomes_project 5 149830486 149896243 - Gm17135 antisense antisense MGP_LPJ_T0008184.1 MGP_LPJ_G0006670.1 mouse_genomes_project 5 75282822 75287384 + Gm42575 lincRNA lincRNA MGP_LPJ_T0001812.1 MGP_LPJ_G0001724.1 mouse_genomes_project 5 121114168 121115124 + TEC TEC MGP_LPJ_T0001673.1 MGP_LPJ_G0001586.1 mouse_genomes_project 5 66142155 66143056 + TEC TEC MGP_LPJ_T0008238.1 MGP_LPJ_G0006715.1 mouse_genomes_project 5 101966609 101975844 + lincRNA lincRNA MGP_LPJ_T0001894.1 MGP_LPJ_G0001805.1 mouse_genomes_project 5 137233600 137236463 - TEC TEC MGP_LPJ_T0073722.1 MGP_LPJ_G0029914.1 mouse_genomes_project 5 124582690 124602031 - MGP_LPJ_P0073722 Oas2 protein_coding protein_coding MGP_LPJ_T0073723.1 MGP_LPJ_G0029914.1 mouse_genomes_project 5 124582691 124602031 - MGP_LPJ_P0073723 Oas2 protein_coding protein_coding MGP_LPJ_T0073724.1 MGP_LPJ_G0029914.1 mouse_genomes_project 5 124582693 124587945 - Oas2 protein_coding retained_intron MGP_LPJ_T0073725.1 MGP_LPJ_G0029914.1 mouse_genomes_project 5 124585641 124590768 - MGP_LPJ_P0073725 Oas2 protein_coding protein_coding MGP_LPJ_T0014817.1 MGP_LPJ_G0012908.1 mouse_genomes_project 5 11460909 11464121 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015049.1 MGP_LPJ_G0013140.1 mouse_genomes_project 5 107418282 107418789 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001475.1 MGP_LPJ_G0001392.1 mouse_genomes_project 5 6796111 6798875 - TEC TEC MGP_LPJ_T0015023.1 MGP_LPJ_G0013114.1 mouse_genomes_project 5 93296323 93297196 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001616.1 MGP_LPJ_G0001530.1 mouse_genomes_project 5 50909828 50913235 - TEC TEC MGP_LPJ_T0001671.1 MGP_LPJ_G0001584.1 mouse_genomes_project 5 66042002 66042705 + TEC TEC MGP_LPJ_T0075889.1 MGP_LPJ_G0030317.1 mouse_genomes_project 5 157211321 157251274 - N4bp2l2 protein_coding processed_transcript MGP_LPJ_T0075890.1 MGP_LPJ_G0030317.1 mouse_genomes_project 5 157239700 157270663 - MGP_LPJ_P0075890 N4bp2l2 protein_coding protein_coding MGP_LPJ_T0075891.1 MGP_LPJ_G0030317.1 mouse_genomes_project 5 157244464 157252016 - N4bp2l2 protein_coding retained_intron MGP_LPJ_T0075892.1 MGP_LPJ_G0030317.1 mouse_genomes_project 5 157246728 157266538 - MGP_LPJ_P0075892 N4bp2l2 protein_coding protein_coding MGP_LPJ_T0075893.1 MGP_LPJ_G0030317.1 mouse_genomes_project 5 157246741 157251548 - N4bp2l2 protein_coding retained_intron MGP_LPJ_T0075894.1 MGP_LPJ_G0030317.1 mouse_genomes_project 5 157251964 157270628 - N4bp2l2 protein_coding retained_intron MGP_LPJ_T0075895.1 MGP_LPJ_G0030317.1 mouse_genomes_project 5 157267467 157270397 - MGP_LPJ_P0075895 N4bp2l2 protein_coding protein_coding MGP_LPJ_T0075896.1 MGP_LPJ_G0030317.1 mouse_genomes_project 5 157270225 157271234 - N4bp2l2 protein_coding retained_intron MGP_LPJ_T0004748.1 MGP_LPJ_G0004108.1 mouse_genomes_project 5 78065714 78072767 + Gm43261 antisense antisense MGP_LPJ_T0015114.1 MGP_LPJ_G0013205.1 mouse_genomes_project 5 140708693 140710251 - processed_pseudogene processed_pseudogene MGP_LPJ_T0070434.1 MGP_LPJ_G0029283.1 mouse_genomes_project 5 28535897 28549034 + MGP_LPJ_P0070434 Gareml protein_coding protein_coding MGP_LPJ_T0001916.1 MGP_LPJ_G0001826.1 mouse_genomes_project 5 144265915 144266706 + TEC TEC MGP_LPJ_T0074997.1 MGP_LPJ_G0030135.1 mouse_genomes_project 5 142780263 142804815 + MGP_LPJ_P0074997 Actl6b protein_coding protein_coding MGP_LPJ_T0074998.1 MGP_LPJ_G0030135.1 mouse_genomes_project 5 142780284 142781093 + Actl6b protein_coding retained_intron MGP_LPJ_T0074999.1 MGP_LPJ_G0030135.1 mouse_genomes_project 5 142780284 142808286 + MGP_LPJ_P0074999 Actl6b protein_coding nonsense_mediated_decay MGP_LPJ_T0075000.1 MGP_LPJ_G0030135.1 mouse_genomes_project 5 142780285 142807389 + MGP_LPJ_P0075000 Actl6b protein_coding protein_coding MGP_LPJ_T0075001.1 MGP_LPJ_G0030135.1 mouse_genomes_project 5 142780301 142781779 + MGP_LPJ_P0075001 Actl6b protein_coding protein_coding MGP_LPJ_T0075002.1 MGP_LPJ_G0030135.1 mouse_genomes_project 5 142780303 142783471 + Actl6b protein_coding retained_intron MGP_LPJ_T0075003.1 MGP_LPJ_G0030135.1 mouse_genomes_project 5 142780303 142811199 + MGP_LPJ_P0075003 Actl6b protein_coding nonsense_mediated_decay MGP_LPJ_T0075004.1 MGP_LPJ_G0030135.1 mouse_genomes_project 5 142780381 142811028 + MGP_LPJ_P0075004 Actl6b protein_coding protein_coding MGP_LPJ_T0098622.1 MGP_LPJ_G0036896.1 mouse_genomes_project 5 47258196 47260336 + Gm20475 sense_intronic sense_intronic MGP_LPJ_T0014798.1 MGP_LPJ_G0012889.1 mouse_genomes_project 5 4352374 4352960 + processed_pseudogene processed_pseudogene MGP_LPJ_T0073568.1 MGP_LPJ_G0029881.1 mouse_genomes_project 5 119622382 119785738 - MGP_LPJ_P0073568 Ccdc60 protein_coding protein_coding MGP_LPJ_T0073569.1 MGP_LPJ_G0029881.1 mouse_genomes_project 5 119658580 119785716 - MGP_LPJ_P0073569 Ccdc60 protein_coding protein_coding MGP_LPJ_T0008490.1 MGP_LPJ_G0006883.1 mouse_genomes_project 5 157174171 157174437 - Gm43690 lincRNA lincRNA MGP_LPJ_T0004731.1 MGP_LPJ_G0004094.1 mouse_genomes_project 5 67529633 67530926 - Gm42670 antisense antisense MGP_LPJ_T0072262.1 MGP_LPJ_G0029598.1 mouse_genomes_project 5 89357424 89396080 + MGP_LPJ_P0072262 Gm28434 protein_coding protein_coding MGP_LPJ_T0001597.1 MGP_LPJ_G0001511.1 mouse_genomes_project 5 48294464 48297008 - TEC TEC MGP_LPJ_T0071837.1 MGP_LPJ_G0029512.1 mouse_genomes_project 5 72912117 72954169 - MGP_LPJ_P0071837 Nfxl1 protein_coding protein_coding MGP_LPJ_T0071838.1 MGP_LPJ_G0029512.1 mouse_genomes_project 5 72912120 72954130 - MGP_LPJ_P0071838 Nfxl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0071839.1 MGP_LPJ_G0029512.1 mouse_genomes_project 5 72912331 72915365 - Nfxl1 protein_coding retained_intron MGP_LPJ_T0071840.1 MGP_LPJ_G0029512.1 mouse_genomes_project 5 72914923 72921147 - Nfxl1 protein_coding retained_intron MGP_LPJ_T0071841.1 MGP_LPJ_G0029512.1 mouse_genomes_project 5 72920687 72923608 - Nfxl1 protein_coding retained_intron MGP_LPJ_T0071842.1 MGP_LPJ_G0029512.1 mouse_genomes_project 5 72940755 72954084 - MGP_LPJ_P0071842 Nfxl1 protein_coding protein_coding MGP_LPJ_T0071843.1 MGP_LPJ_G0029512.1 mouse_genomes_project 5 72944707 72953897 - Nfxl1 protein_coding retained_intron MGP_LPJ_T0071844.1 MGP_LPJ_G0029512.1 mouse_genomes_project 5 72944709 72954133 - Nfxl1 protein_coding retained_intron MGP_LPJ_T0071845.1 MGP_LPJ_G0029512.1 mouse_genomes_project 5 72949937 72954108 - Nfxl1 protein_coding retained_intron MGP_LPJ_T0074036.1 MGP_LPJ_G0029966.1 mouse_genomes_project 5 127321059 127354447 - MGP_LPJ_P0074036 Rhof protein_coding nonsense_mediated_decay MGP_LPJ_T0074037.1 MGP_LPJ_G0029966.1 mouse_genomes_project 5 127321059 127354382 - MGP_LPJ_P0074037 Rhof protein_coding protein_coding MGP_LPJ_T0074038.1 MGP_LPJ_G0029966.1 mouse_genomes_project 5 127329152 127354415 - Rhof protein_coding processed_transcript MGP_LPJ_T0074039.1 MGP_LPJ_G0029966.1 mouse_genomes_project 5 127337786 127354678 - MGP_LPJ_P0074039 Rhof protein_coding protein_coding MGP_LPJ_T0008196.1 MGP_LPJ_G0006680.1 mouse_genomes_project 5 77660323 77672730 - 1700112J05Rik lincRNA lincRNA MGP_LPJ_T0071979.1 MGP_LPJ_G0029536.1 mouse_genomes_project 5 75613331 75615624 + MGP_LPJ_P0071979 Gsx2 protein_coding protein_coding MGP_LPJ_T0071980.1 MGP_LPJ_G0029536.1 mouse_genomes_project 5 75613332 75615356 + MGP_LPJ_P0071980 Gsx2 protein_coding protein_coding MGP_LPJ_T0072752.1 MGP_LPJ_G0029717.1 mouse_genomes_project 5 106792380 106806640 + MGP_LPJ_P0072752 BC005561 protein_coding protein_coding MGP_LPJ_T0072846.1 MGP_LPJ_G0029740.1 mouse_genomes_project 5 110135209 110178918 + MGP_LPJ_P0072846 protein_coding protein_coding MGP_LPJ_T0075596.1 MGP_LPJ_G0030261.1 mouse_genomes_project 5 151087918 151116411 + MGP_LPJ_P0075596 Arpc1a protein_coding protein_coding MGP_LPJ_T0075597.1 MGP_LPJ_G0030261.1 mouse_genomes_project 5 151087972 151101227 + Arpc1a protein_coding processed_transcript MGP_LPJ_T0075598.1 MGP_LPJ_G0030261.1 mouse_genomes_project 5 151087994 151116406 + MGP_LPJ_P0075598 Arpc1a protein_coding nonsense_mediated_decay MGP_LPJ_T0075599.1 MGP_LPJ_G0030261.1 mouse_genomes_project 5 151088187 151102272 + MGP_LPJ_P0075599 Arpc1a protein_coding protein_coding MGP_LPJ_T0075600.1 MGP_LPJ_G0030261.1 mouse_genomes_project 5 151101300 151103922 + Arpc1a protein_coding retained_intron MGP_LPJ_T0075601.1 MGP_LPJ_G0030261.1 mouse_genomes_project 5 151111873 151116242 + Arpc1a protein_coding retained_intron MGP_LPJ_T0100821.1 MGP_LPJ_G0039084.1 mouse_genomes_project 5 19065765 19065884 - Gm22490 snoRNA snoRNA MGP_LPJ_T0001565.1 MGP_LPJ_G0001479.1 mouse_genomes_project 5 43642152 43643055 - TEC TEC MGP_LPJ_T0001668.1 MGP_LPJ_G0001581.1 mouse_genomes_project 5 65955167 65957621 + TEC TEC MGP_LPJ_T0070815.1 MGP_LPJ_G0029341.1 mouse_genomes_project 5 31690483 31748022 + MGP_LPJ_P0070815 Slc5a1 protein_coding protein_coding MGP_LPJ_T0072093.1 MGP_LPJ_G0029558.1 mouse_genomes_project 5 77968786 77985835 - MGP_LPJ_P0072093 Noa1 protein_coding protein_coding MGP_LPJ_T0072094.1 MGP_LPJ_G0029558.1 mouse_genomes_project 5 77977871 77978814 - Noa1 protein_coding processed_transcript MGP_LPJ_T0072095.1 MGP_LPJ_G0029558.1 mouse_genomes_project 5 77980731 77985810 - Noa1 protein_coding retained_intron MGP_LPJ_T0072096.1 MGP_LPJ_G0029558.1 mouse_genomes_project 5 77981357 77983394 - Noa1 protein_coding processed_transcript MGP_LPJ_T0008277.1 MGP_LPJ_G0006743.1 mouse_genomes_project 5 111051935 111055656 + Gm43082 lincRNA lincRNA MGP_LPJ_T0069967.1 MGP_LPJ_G0029192.1 mouse_genomes_project 5 6021486 6098099 + MGP_LPJ_P0069967 Abcb4 protein_coding protein_coding MGP_LPJ_T0069968.1 MGP_LPJ_G0029192.1 mouse_genomes_project 5 6021490 6029961 + Abcb4 protein_coding retained_intron MGP_LPJ_T0069969.1 MGP_LPJ_G0029192.1 mouse_genomes_project 5 6021718 6078098 + MGP_LPJ_P0069969 Abcb4 protein_coding protein_coding MGP_LPJ_T0069970.1 MGP_LPJ_G0029192.1 mouse_genomes_project 5 6065114 6068440 + Abcb4 protein_coding retained_intron MGP_LPJ_T0069971.1 MGP_LPJ_G0029192.1 mouse_genomes_project 5 6095803 6098104 + Abcb4 protein_coding retained_intron MGP_LPJ_T0074389.1 MGP_LPJ_G0030026.1 mouse_genomes_project 5 133586610 133591764 + MGP_LPJ_P0074389 Ran protein_coding protein_coding MGP_LPJ_T0074390.1 MGP_LPJ_G0030026.1 mouse_genomes_project 5 133586743 133587330 + Ran protein_coding processed_transcript MGP_LPJ_T0074391.1 MGP_LPJ_G0030026.1 mouse_genomes_project 5 133586813 133591764 + MGP_LPJ_P0074391 Ran protein_coding protein_coding MGP_LPJ_T0014941.1 MGP_LPJ_G0013032.1 mouse_genomes_project 5 58767212 58767906 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001578.1 MGP_LPJ_G0001492.1 mouse_genomes_project 5 45061899 45063022 + TEC TEC MGP_LPJ_T0073041.1 MGP_LPJ_G0029783.1 mouse_genomes_project 5 113234689 113261665 + MGP_LPJ_P0073041 Ankle2 protein_coding protein_coding MGP_LPJ_T0073042.1 MGP_LPJ_G0029783.1 mouse_genomes_project 5 113234689 113260479 + MGP_LPJ_P0073042 Ankle2 protein_coding protein_coding MGP_LPJ_T0073043.1 MGP_LPJ_G0029783.1 mouse_genomes_project 5 113234726 113261661 + MGP_LPJ_P0073043 Ankle2 protein_coding protein_coding MGP_LPJ_T0073044.1 MGP_LPJ_G0029783.1 mouse_genomes_project 5 113234848 113243179 + Ankle2 protein_coding retained_intron MGP_LPJ_T0073045.1 MGP_LPJ_G0029783.1 mouse_genomes_project 5 113242519 113243261 + Ankle2 protein_coding retained_intron MGP_LPJ_T0073046.1 MGP_LPJ_G0029783.1 mouse_genomes_project 5 113255765 113258075 + Ankle2 protein_coding processed_transcript MGP_LPJ_T0069770.1 MGP_LPJ_G0029162.1 mouse_genomes_project 5 437681 450286 - MGP_LPJ_P0069770 Rbm48 protein_coding protein_coding MGP_LPJ_T0069771.1 MGP_LPJ_G0029162.1 mouse_genomes_project 5 438479 449760 - MGP_LPJ_P0069771 Rbm48 protein_coding nonsense_mediated_decay MGP_LPJ_T0069772.1 MGP_LPJ_G0029162.1 mouse_genomes_project 5 444483 445847 - Rbm48 protein_coding retained_intron MGP_LPJ_T0069773.1 MGP_LPJ_G0029162.1 mouse_genomes_project 5 445187 449783 - Rbm48 protein_coding retained_intron MGP_LPJ_T0069774.1 MGP_LPJ_G0029162.1 mouse_genomes_project 5 445961 449903 - MGP_LPJ_P0069774 Rbm48 protein_coding protein_coding MGP_LPJ_T0072789.1 MGP_LPJ_G0029729.1 mouse_genomes_project 5 108992276 108997901 - MGP_LPJ_P0072789 Barhl2 protein_coding protein_coding MGP_LPJ_T0075169.1 MGP_LPJ_G0030170.1 mouse_genomes_project 5 143670481 143676832 - MGP_LPJ_P0075169 Gpc2 protein_coding protein_coding MGP_LPJ_T0075170.1 MGP_LPJ_G0030170.1 mouse_genomes_project 5 143670483 143676812 - Gpc2 protein_coding retained_intron MGP_LPJ_T0075171.1 MGP_LPJ_G0030170.1 mouse_genomes_project 5 143670483 143676789 - Gpc2 protein_coding retained_intron MGP_LPJ_T0075172.1 MGP_LPJ_G0030170.1 mouse_genomes_project 5 143670483 143676809 - MGP_LPJ_P0075172 Gpc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0075173.1 MGP_LPJ_G0030170.1 mouse_genomes_project 5 143670486 143676792 - MGP_LPJ_P0075173 Gpc2 protein_coding protein_coding MGP_LPJ_T0075174.1 MGP_LPJ_G0030170.1 mouse_genomes_project 5 143672354 143675064 - Gpc2 protein_coding retained_intron MGP_LPJ_T0075175.1 MGP_LPJ_G0030170.1 mouse_genomes_project 5 143673467 143676790 - Gpc2 protein_coding processed_transcript MGP_LPJ_T0001740.1 MGP_LPJ_G0001652.1 mouse_genomes_project 5 93293788 93294610 - TEC TEC MGP_LPJ_T0071806.1 MGP_LPJ_G0029505.1 mouse_genomes_project 5 71080941 71171408 - MGP_LPJ_P0071806 Gabrg1 protein_coding protein_coding MGP_LPJ_T0071807.1 MGP_LPJ_G0029505.1 mouse_genomes_project 5 71081669 71170995 - MGP_LPJ_P0071807 Gabrg1 protein_coding protein_coding MGP_LPJ_T0071808.1 MGP_LPJ_G0029505.1 mouse_genomes_project 5 71100362 71171105 - Gabrg1 protein_coding retained_intron MGP_LPJ_T0071809.1 MGP_LPJ_G0029505.1 mouse_genomes_project 5 71143551 71171105 - Gabrg1 protein_coding retained_intron MGP_LPJ_T0072418.1 MGP_LPJ_G0029647.1 mouse_genomes_project 5 93802894 93824596 - MGP_LPJ_P0072418 Naaa protein_coding protein_coding MGP_LPJ_T0072419.1 MGP_LPJ_G0029647.1 mouse_genomes_project 5 93802899 93808191 - Naaa protein_coding retained_intron MGP_LPJ_T0072420.1 MGP_LPJ_G0029647.1 mouse_genomes_project 5 93803881 93824591 - MGP_LPJ_P0072420 Naaa protein_coding protein_coding MGP_LPJ_T0072421.1 MGP_LPJ_G0029647.1 mouse_genomes_project 5 93805004 93819126 - MGP_LPJ_P0072421 Naaa protein_coding protein_coding MGP_LPJ_T0072422.1 MGP_LPJ_G0029647.1 mouse_genomes_project 5 93822242 93824591 - Naaa protein_coding retained_intron MGP_LPJ_T0071880.1 MGP_LPJ_G0029520.1 mouse_genomes_project 5 73420052 73427500 + MGP_LPJ_P0071880 Gm5868 protein_coding protein_coding MGP_LPJ_T0072837.1 MGP_LPJ_G0029737.1 mouse_genomes_project 5 110050013 110053504 + MGP_LPJ_P0072837 Lpcat2b protein_coding protein_coding MGP_LPJ_T0004760.1 MGP_LPJ_G0004119.1 mouse_genomes_project 5 100139857 100142711 - A730035I17Rik antisense antisense MGP_LPJ_T0004761.1 MGP_LPJ_G0004119.1 mouse_genomes_project 5 100139873 100141937 - A730035I17Rik antisense antisense MGP_LPJ_T0004762.1 MGP_LPJ_G0004119.1 mouse_genomes_project 5 100140760 100142509 - A730035I17Rik antisense antisense MGP_LPJ_T0004763.1 MGP_LPJ_G0004119.1 mouse_genomes_project 5 100141183 100141940 - A730035I17Rik antisense antisense MGP_LPJ_T0004764.1 MGP_LPJ_G0004119.1 mouse_genomes_project 5 100142022 100142711 - A730035I17Rik antisense pseudogene MGP_LPJ_T0074446.1 MGP_LPJ_G0030036.1 mouse_genomes_project 5 134451176 134468874 - MGP_LPJ_P0074446 Phkg1 protein_coding protein_coding MGP_LPJ_T0074447.1 MGP_LPJ_G0030036.1 mouse_genomes_project 5 134454836 134490574 - MGP_LPJ_P0074447 Phkg1 protein_coding protein_coding MGP_LPJ_T0074448.1 MGP_LPJ_G0030036.1 mouse_genomes_project 5 134454841 134458261 - Phkg1 protein_coding retained_intron MGP_LPJ_T0074449.1 MGP_LPJ_G0030036.1 mouse_genomes_project 5 134458032 134460151 - Phkg1 protein_coding processed_transcript MGP_LPJ_T0074450.1 MGP_LPJ_G0030036.1 mouse_genomes_project 5 134467299 134468839 - Phkg1 protein_coding retained_intron MGP_LPJ_T0015010.1 MGP_LPJ_G0013101.1 mouse_genomes_project 5 89465493 89467351 + processed_pseudogene processed_pseudogene MGP_LPJ_T0075405.1 MGP_LPJ_G0030219.1 mouse_genomes_project 5 148572216 148592112 + MGP_LPJ_P0075405 Slc29a4 protein_coding protein_coding MGP_LPJ_T0075406.1 MGP_LPJ_G0030219.1 mouse_genomes_project 5 148581464 148602328 + MGP_LPJ_P0075406 Slc29a4 protein_coding protein_coding MGP_LPJ_T0073906.1 MGP_LPJ_G0029948.1 mouse_genomes_project 5 126456572 126494226 + MGP_LPJ_P0073906 Pptc7 protein_coding protein_coding MGP_LPJ_T0001810.1 MGP_LPJ_G0001722.1 mouse_genomes_project 5 120367891 120368324 + TEC TEC MGP_LPJ_T0072048.1 MGP_LPJ_G0029549.1 mouse_genomes_project 5 77523255 77559929 - MGP_LPJ_P0072048 Aasdh protein_coding nonsense_mediated_decay MGP_LPJ_T0072049.1 MGP_LPJ_G0029549.1 mouse_genomes_project 5 77525531 77526264 - Aasdh protein_coding processed_transcript MGP_LPJ_T0072050.1 MGP_LPJ_G0029549.1 mouse_genomes_project 5 77525531 77560016 - MGP_LPJ_P0072050 Aasdh protein_coding protein_coding MGP_LPJ_T0072051.1 MGP_LPJ_G0029549.1 mouse_genomes_project 5 77525536 77560015 - MGP_LPJ_P0072051 Aasdh protein_coding nonsense_mediated_decay MGP_LPJ_T0072052.1 MGP_LPJ_G0029549.1 mouse_genomes_project 5 77525582 77555687 - MGP_LPJ_P0072052 Aasdh protein_coding protein_coding MGP_LPJ_T0072053.1 MGP_LPJ_G0029549.1 mouse_genomes_project 5 77525764 77533149 - MGP_LPJ_P0072053 Aasdh protein_coding protein_coding MGP_LPJ_T0072054.1 MGP_LPJ_G0029549.1 mouse_genomes_project 5 77530651 77559994 - Aasdh protein_coding retained_intron MGP_LPJ_T0072055.1 MGP_LPJ_G0029549.1 mouse_genomes_project 5 77533605 77559989 - MGP_LPJ_P0072055 Aasdh protein_coding protein_coding MGP_LPJ_T0072056.1 MGP_LPJ_G0029549.1 mouse_genomes_project 5 77533620 77535418 - Aasdh protein_coding retained_intron MGP_LPJ_T0072057.1 MGP_LPJ_G0029549.1 mouse_genomes_project 5 77546120 77548578 - Aasdh protein_coding retained_intron MGP_LPJ_T0072058.1 MGP_LPJ_G0029549.1 mouse_genomes_project 5 77547949 77559994 - Aasdh protein_coding processed_transcript MGP_LPJ_T0072059.1 MGP_LPJ_G0029549.1 mouse_genomes_project 5 77549741 77559994 - Aasdh protein_coding retained_intron MGP_LPJ_T0072060.1 MGP_LPJ_G0029549.1 mouse_genomes_project 5 77555505 77559892 - MGP_LPJ_P0072060 Aasdh protein_coding protein_coding MGP_LPJ_T0072061.1 MGP_LPJ_G0029549.1 mouse_genomes_project 5 77555594 77560005 - MGP_LPJ_P0072061 Aasdh protein_coding protein_coding MGP_LPJ_T0072062.1 MGP_LPJ_G0029549.1 mouse_genomes_project 5 77558831 77559930 - Aasdh protein_coding processed_transcript MGP_LPJ_T0001832.1 MGP_LPJ_G0001744.1 mouse_genomes_project 5 125849291 125853469 + TEC TEC MGP_LPJ_T0074747.1 MGP_LPJ_G0030087.1 mouse_genomes_project 5 140551409 140556058 - MGP_LPJ_P0074747 Ccl26 protein_coding protein_coding MGP_LPJ_T0001795.1 MGP_LPJ_G0001707.1 mouse_genomes_project 5 116539198 116540398 - TEC TEC MGP_LPJ_T0074482.1 MGP_LPJ_G0030044.1 mouse_genomes_project 5 134770391 134781298 + MGP_LPJ_P0074482 Kctd7 protein_coding protein_coding MGP_LPJ_T0074483.1 MGP_LPJ_G0030044.1 mouse_genomes_project 5 134770454 134777224 + MGP_LPJ_P0074483 Kctd7 protein_coding nonsense_mediated_decay MGP_LPJ_T0074484.1 MGP_LPJ_G0030044.1 mouse_genomes_project 5 134770634 134777986 + MGP_LPJ_P0074484 Kctd7 protein_coding protein_coding MGP_LPJ_T0001571.1 MGP_LPJ_G0001485.1 mouse_genomes_project 5 43882169 43884388 - TEC TEC MGP_LPJ_T0015067.1 MGP_LPJ_G0013158.1 mouse_genomes_project 5 111553714 111555117 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008192.1 MGP_LPJ_G0006677.1 mouse_genomes_project 5 76436949 76440666 - Gm28865 lincRNA lincRNA MGP_LPJ_T0070539.1 MGP_LPJ_G0029301.1 mouse_genomes_project 5 29344077 29353900 + MGP_LPJ_P0070539 Khk protein_coding protein_coding MGP_LPJ_T0070540.1 MGP_LPJ_G0029301.1 mouse_genomes_project 5 29344242 29353698 + MGP_LPJ_P0070540 Khk protein_coding protein_coding MGP_LPJ_T0070541.1 MGP_LPJ_G0029301.1 mouse_genomes_project 5 29344485 29353841 + MGP_LPJ_P0070541 Khk protein_coding protein_coding MGP_LPJ_T0070542.1 MGP_LPJ_G0029301.1 mouse_genomes_project 5 29344510 29353445 + MGP_LPJ_P0070542 Khk protein_coding protein_coding MGP_LPJ_T0070543.1 MGP_LPJ_G0029301.1 mouse_genomes_project 5 29353265 29353897 + Khk protein_coding retained_intron MGP_LPJ_T0072465.1 MGP_LPJ_G0029654.1 mouse_genomes_project 5 94104004 94143070 + MGP_LPJ_P0072465 Fam47e protein_coding protein_coding MGP_LPJ_T0072466.1 MGP_LPJ_G0029654.1 mouse_genomes_project 5 94104037 94142970 + MGP_LPJ_P0072466 Fam47e protein_coding nonsense_mediated_decay MGP_LPJ_T0072467.1 MGP_LPJ_G0029654.1 mouse_genomes_project 5 94122120 94143192 + MGP_LPJ_P0072467 Fam47e protein_coding protein_coding MGP_LPJ_T0072468.1 MGP_LPJ_G0029654.1 mouse_genomes_project 5 94122180 94143589 + MGP_LPJ_P0072468 Fam47e protein_coding protein_coding MGP_LPJ_T0072469.1 MGP_LPJ_G0029654.1 mouse_genomes_project 5 94122186 94137687 + MGP_LPJ_P0072469 Fam47e protein_coding protein_coding MGP_LPJ_T0072470.1 MGP_LPJ_G0029654.1 mouse_genomes_project 5 94122199 94143041 + MGP_LPJ_P0072470 Fam47e protein_coding protein_coding MGP_LPJ_T0072471.1 MGP_LPJ_G0029654.1 mouse_genomes_project 5 94122315 94142924 + MGP_LPJ_P0072471 Fam47e protein_coding protein_coding MGP_LPJ_T0014940.1 MGP_LPJ_G0013031.1 mouse_genomes_project 5 57851167 57851389 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010685.1 MGP_LPJ_G0008803.1 mouse_genomes_project 5 11483744 11483849 - Gm24054 miRNA miRNA MGP_LPJ_T0001706.1 MGP_LPJ_G0001619.1 mouse_genomes_project 5 69870264 69870588 - TEC TEC MGP_LPJ_T0070395.1 MGP_LPJ_G0029274.1 mouse_genomes_project 5 27596565 27741374 - MGP_LPJ_P0070395 Lmbr1 protein_coding protein_coding MGP_LPJ_T0070396.1 MGP_LPJ_G0029274.1 mouse_genomes_project 5 27596577 27741380 - MGP_LPJ_P0070396 Lmbr1 protein_coding protein_coding MGP_LPJ_T0070397.1 MGP_LPJ_G0029274.1 mouse_genomes_project 5 27598883 27741292 - MGP_LPJ_P0070397 Lmbr1 protein_coding protein_coding MGP_LPJ_T0070398.1 MGP_LPJ_G0029274.1 mouse_genomes_project 5 27599137 27741374 - MGP_LPJ_P0070398 Lmbr1 protein_coding protein_coding MGP_LPJ_T0070399.1 MGP_LPJ_G0029274.1 mouse_genomes_project 5 27599605 27741320 - MGP_LPJ_P0070399 Lmbr1 protein_coding protein_coding MGP_LPJ_T0070400.1 MGP_LPJ_G0029274.1 mouse_genomes_project 5 27601782 27661322 - MGP_LPJ_P0070400 Lmbr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0070401.1 MGP_LPJ_G0029274.1 mouse_genomes_project 5 27626309 27725731 - Lmbr1 protein_coding processed_transcript MGP_LPJ_T0072762.1 MGP_LPJ_G0029723.1 mouse_genomes_project 5 107542096 107564541 - MGP_LPJ_P0072762 protein_coding protein_coding MGP_LPJ_T0001804.1 MGP_LPJ_G0001716.1 mouse_genomes_project 5 118860620 118863293 - TEC TEC MGP_LPJ_T0008101.1 MGP_LPJ_G0006608.1 mouse_genomes_project 5 31875673 31894912 - Gm20465 lincRNA lincRNA MGP_LPJ_T0018085.1 MGP_LPJ_G0015512.1 mouse_genomes_project 5 43178322 43200959 - Gm42716 processed_transcript sense_intronic MGP_LPJ_T0018086.1 MGP_LPJ_G0015512.1 mouse_genomes_project 5 43194478 43200903 - Gm42716 processed_transcript sense_intronic MGP_LPJ_T0018087.1 MGP_LPJ_G0015512.1 mouse_genomes_project 5 43200454 43202224 - Gm42716 processed_transcript retained_intron MGP_LPJ_T0001533.1 MGP_LPJ_G0001447.1 mouse_genomes_project 5 31553693 31554942 + TEC TEC MGP_LPJ_T0073267.1 MGP_LPJ_G0029828.1 mouse_genomes_project 5 117096580 117167024 - MGP_LPJ_P0073267 Coro1c protein_coding nonsense_mediated_decay MGP_LPJ_T0073268.1 MGP_LPJ_G0029828.1 mouse_genomes_project 5 117096580 117167077 - MGP_LPJ_P0073268 Coro1c protein_coding protein_coding MGP_LPJ_T0073269.1 MGP_LPJ_G0029828.1 mouse_genomes_project 5 117099397 117105003 - Coro1c protein_coding retained_intron MGP_LPJ_T0073270.1 MGP_LPJ_G0029828.1 mouse_genomes_project 5 117099408 117104006 - Coro1c protein_coding retained_intron MGP_LPJ_T0073271.1 MGP_LPJ_G0029828.1 mouse_genomes_project 5 117100343 117101779 - Coro1c protein_coding retained_intron MGP_LPJ_T0073272.1 MGP_LPJ_G0029828.1 mouse_genomes_project 5 117102270 117103811 - Coro1c protein_coding retained_intron MGP_LPJ_T0073273.1 MGP_LPJ_G0029828.1 mouse_genomes_project 5 117102694 117128846 - Coro1c protein_coding processed_transcript MGP_LPJ_T0073274.1 MGP_LPJ_G0029828.1 mouse_genomes_project 5 117102753 117112924 - Coro1c protein_coding processed_transcript MGP_LPJ_T0073275.1 MGP_LPJ_G0029828.1 mouse_genomes_project 5 117119890 117137133 - MGP_LPJ_P0073275 Coro1c protein_coding protein_coding MGP_LPJ_T0073276.1 MGP_LPJ_G0029828.1 mouse_genomes_project 5 117119948 117136619 - MGP_LPJ_P0073276 Coro1c protein_coding protein_coding MGP_LPJ_T0073277.1 MGP_LPJ_G0029828.1 mouse_genomes_project 5 117131258 117166964 - Coro1c protein_coding retained_intron MGP_LPJ_T0011626.1 MGP_LPJ_G0009744.1 mouse_genomes_project 5 137611726 137612005 + Gm25722 misc_RNA misc_RNA MGP_LPJ_T0075407.1 MGP_LPJ_G0030220.1 mouse_genomes_project 5 148605926 148672416 - MGP_LPJ_P0075407 protein_coding protein_coding MGP_LPJ_T0075408.1 MGP_LPJ_G0030220.1 mouse_genomes_project 5 148613371 148617897 - protein_coding processed_transcript MGP_LPJ_T0075409.1 MGP_LPJ_G0030220.1 mouse_genomes_project 5 148614226 148618440 - protein_coding retained_intron MGP_LPJ_T0075410.1 MGP_LPJ_G0030220.1 mouse_genomes_project 5 148638425 148703767 - MGP_LPJ_P0075410 protein_coding protein_coding MGP_LPJ_T0075411.1 MGP_LPJ_G0030220.1 mouse_genomes_project 5 148647937 148649645 - protein_coding retained_intron MGP_LPJ_T0075412.1 MGP_LPJ_G0030220.1 mouse_genomes_project 5 148672204 148684382 - protein_coding processed_transcript MGP_LPJ_T0075413.1 MGP_LPJ_G0030220.1 mouse_genomes_project 5 148676944 148703485 - MGP_LPJ_P0075413 protein_coding protein_coding MGP_LPJ_T0069818.1 MGP_LPJ_G0029170.1 mouse_genomes_project 5 778662 780047 - MGP_LPJ_P0069818 Mterf1a protein_coding protein_coding MGP_LPJ_T0073716.1 MGP_LPJ_G0029913.1 mouse_genomes_project 5 124530078 124561817 - MGP_LPJ_P0073716 Dtx1 protein_coding protein_coding MGP_LPJ_T0073717.1 MGP_LPJ_G0029913.1 mouse_genomes_project 5 124530079 124545293 - Dtx1 protein_coding retained_intron MGP_LPJ_T0073718.1 MGP_LPJ_G0029913.1 mouse_genomes_project 5 124530125 124531954 - Dtx1 protein_coding retained_intron MGP_LPJ_T0073719.1 MGP_LPJ_G0029913.1 mouse_genomes_project 5 124531077 124532790 - Dtx1 protein_coding retained_intron MGP_LPJ_T0073720.1 MGP_LPJ_G0029913.1 mouse_genomes_project 5 124531327 124532688 - Dtx1 protein_coding retained_intron MGP_LPJ_T0073721.1 MGP_LPJ_G0029913.1 mouse_genomes_project 5 124544610 124555720 - Dtx1 protein_coding processed_transcript MGP_LPJ_T0075830.1 MGP_LPJ_G0030310.1 mouse_genomes_project 5 156157321 156180463 - MGP_LPJ_P0075830 Hsph1 protein_coding protein_coding MGP_LPJ_T0075831.1 MGP_LPJ_G0030310.1 mouse_genomes_project 5 156159578 156180630 - MGP_LPJ_P0075831 Hsph1 protein_coding protein_coding MGP_LPJ_T0075832.1 MGP_LPJ_G0030310.1 mouse_genomes_project 5 156159879 156180501 - MGP_LPJ_P0075832 Hsph1 protein_coding protein_coding MGP_LPJ_T0075833.1 MGP_LPJ_G0030310.1 mouse_genomes_project 5 156160203 156180630 - MGP_LPJ_P0075833 Hsph1 protein_coding protein_coding MGP_LPJ_T0075834.1 MGP_LPJ_G0030310.1 mouse_genomes_project 5 156160489 156162208 - Hsph1 protein_coding retained_intron MGP_LPJ_T0075835.1 MGP_LPJ_G0030310.1 mouse_genomes_project 5 156162927 156164222 - Hsph1 protein_coding retained_intron MGP_LPJ_T0075836.1 MGP_LPJ_G0030310.1 mouse_genomes_project 5 156163716 156180630 - Hsph1 protein_coding retained_intron MGP_LPJ_T0075837.1 MGP_LPJ_G0030310.1 mouse_genomes_project 5 156174275 156180668 - MGP_LPJ_P0075837 Hsph1 protein_coding protein_coding MGP_LPJ_T0075838.1 MGP_LPJ_G0030310.1 mouse_genomes_project 5 156174731 156180582 - MGP_LPJ_P0075838 Hsph1 protein_coding protein_coding MGP_LPJ_T0075839.1 MGP_LPJ_G0030310.1 mouse_genomes_project 5 156176330 156180643 - MGP_LPJ_P0075839 Hsph1 protein_coding protein_coding MGP_LPJ_T0075840.1 MGP_LPJ_G0030310.1 mouse_genomes_project 5 156176389 156178179 - Hsph1 protein_coding processed_transcript MGP_LPJ_T0015145.1 MGP_LPJ_G0013236.1 mouse_genomes_project 5 151021619 151022068 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015097.1 MGP_LPJ_G0013188.1 mouse_genomes_project 5 125474078 125474900 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008262.1 MGP_LPJ_G0006730.1 mouse_genomes_project 5 107906457 107912019 + Gm26519 lincRNA lincRNA MGP_LPJ_T0098623.1 MGP_LPJ_G0036897.1 mouse_genomes_project 5 73637948 73640436 - Gm17207 sense_intronic sense_intronic MGP_LPJ_T0071514.1 MGP_LPJ_G0029456.1 mouse_genomes_project 5 53327078 53361712 + MGP_LPJ_P0071514 Tbc1d19 protein_coding nonsense_mediated_decay MGP_LPJ_T0071515.1 MGP_LPJ_G0029456.1 mouse_genomes_project 5 53327099 53421377 + MGP_LPJ_P0071515 Tbc1d19 protein_coding protein_coding MGP_LPJ_T0071516.1 MGP_LPJ_G0029456.1 mouse_genomes_project 5 53327120 53354219 + Tbc1d19 protein_coding processed_transcript MGP_LPJ_T0071517.1 MGP_LPJ_G0029456.1 mouse_genomes_project 5 53327121 53348528 + Tbc1d19 protein_coding retained_intron MGP_LPJ_T0071518.1 MGP_LPJ_G0029456.1 mouse_genomes_project 5 53327126 53421375 + MGP_LPJ_P0071518 Tbc1d19 protein_coding nonsense_mediated_decay MGP_LPJ_T0071519.1 MGP_LPJ_G0029456.1 mouse_genomes_project 5 53327151 53355758 + MGP_LPJ_P0071519 Tbc1d19 protein_coding nonsense_mediated_decay MGP_LPJ_T0071520.1 MGP_LPJ_G0029456.1 mouse_genomes_project 5 53350355 53355700 + Tbc1d19 protein_coding retained_intron MGP_LPJ_T0071521.1 MGP_LPJ_G0029456.1 mouse_genomes_project 5 53354208 53365372 + Tbc1d19 protein_coding processed_transcript MGP_LPJ_T0071522.1 MGP_LPJ_G0029456.1 mouse_genomes_project 5 53407589 53421150 + Tbc1d19 protein_coding processed_transcript MGP_LPJ_T0001794.1 MGP_LPJ_G0001706.1 mouse_genomes_project 5 116371925 116372846 - TEC TEC MGP_LPJ_T0099584.1 MGP_LPJ_G0037847.1 mouse_genomes_project 5 73379506 73379592 - Gm24776 snRNA snRNA MGP_LPJ_T0001509.1 MGP_LPJ_G0001425.1 mouse_genomes_project 5 23906283 23908310 - TEC TEC MGP_LPJ_T0071623.1 MGP_LPJ_G0029478.1 mouse_genomes_project 5 65555417 65580653 - MGP_LPJ_P0071623 Ugdh protein_coding protein_coding MGP_LPJ_T0071624.1 MGP_LPJ_G0029478.1 mouse_genomes_project 5 65555420 65568924 - Ugdh protein_coding retained_intron MGP_LPJ_T0071625.1 MGP_LPJ_G0029478.1 mouse_genomes_project 5 65560975 65566264 - Ugdh protein_coding retained_intron MGP_LPJ_T0071626.1 MGP_LPJ_G0029478.1 mouse_genomes_project 5 65566811 65573093 - MGP_LPJ_P0071626 Ugdh protein_coding protein_coding MGP_LPJ_T0001877.1 MGP_LPJ_G0001788.1 mouse_genomes_project 5 136370433 136372184 - TEC TEC MGP_LPJ_T0071079.1 MGP_LPJ_G0029382.1 mouse_genomes_project 5 34377100 34403437 - MGP_LPJ_P0071079 Htra3 protein_coding protein_coding MGP_LPJ_T0071080.1 MGP_LPJ_G0029382.1 mouse_genomes_project 5 34377160 34403148 - MGP_LPJ_P0071080 Htra3 protein_coding nonsense_mediated_decay MGP_LPJ_T0071081.1 MGP_LPJ_G0029382.1 mouse_genomes_project 5 34385662 34403526 - MGP_LPJ_P0071081 Htra3 protein_coding protein_coding MGP_LPJ_T0071082.1 MGP_LPJ_G0029382.1 mouse_genomes_project 5 34392296 34395656 - MGP_LPJ_P0071082 Htra3 protein_coding protein_coding MGP_LPJ_T0071083.1 MGP_LPJ_G0029382.1 mouse_genomes_project 5 34402436 34403516 - Htra3 protein_coding retained_intron MGP_LPJ_T0001635.1 MGP_LPJ_G0001549.1 mouse_genomes_project 5 57474276 57476864 + TEC TEC MGP_LPJ_T0071921.1 MGP_LPJ_G0029526.1 mouse_genomes_project 5 73937613 74021036 + MGP_LPJ_P0071921 Dcun1d4 protein_coding protein_coding MGP_LPJ_T0071922.1 MGP_LPJ_G0029526.1 mouse_genomes_project 5 73942811 74017527 + Dcun1d4 protein_coding processed_transcript MGP_LPJ_T0071923.1 MGP_LPJ_G0029526.1 mouse_genomes_project 5 73949392 74021036 + MGP_LPJ_P0071923 Dcun1d4 protein_coding protein_coding MGP_LPJ_T0071924.1 MGP_LPJ_G0029526.1 mouse_genomes_project 5 73949434 74004257 + MGP_LPJ_P0071924 Dcun1d4 protein_coding nonsense_mediated_decay MGP_LPJ_T0071925.1 MGP_LPJ_G0029526.1 mouse_genomes_project 5 73949490 73991676 + MGP_LPJ_P0071925 Dcun1d4 protein_coding nonsense_mediated_decay MGP_LPJ_T0071926.1 MGP_LPJ_G0029526.1 mouse_genomes_project 5 73949534 74021029 + MGP_LPJ_P0071926 Dcun1d4 protein_coding protein_coding MGP_LPJ_T0071927.1 MGP_LPJ_G0029526.1 mouse_genomes_project 5 73950915 73979794 + Dcun1d4 protein_coding processed_transcript MGP_LPJ_T0071928.1 MGP_LPJ_G0029526.1 mouse_genomes_project 5 73970846 73994859 + MGP_LPJ_P0071928 Dcun1d4 protein_coding protein_coding MGP_LPJ_T0014927.1 MGP_LPJ_G0013018.1 mouse_genomes_project 5 52395550 52396570 - processed_pseudogene processed_pseudogene MGP_LPJ_T0073124.1 MGP_LPJ_G0029796.1 mouse_genomes_project 5 113862678 113874292 - MGP_LPJ_P0073124 Hscb protein_coding protein_coding MGP_LPJ_T0073125.1 MGP_LPJ_G0029796.1 mouse_genomes_project 5 113862687 113874139 - MGP_LPJ_P0073125 Hscb protein_coding protein_coding MGP_LPJ_T0073126.1 MGP_LPJ_G0029796.1 mouse_genomes_project 5 113862687 113870922 - MGP_LPJ_P0073126 Hscb protein_coding nonsense_mediated_decay MGP_LPJ_T0073127.1 MGP_LPJ_G0029796.1 mouse_genomes_project 5 113862688 113869366 - Hscb protein_coding retained_intron MGP_LPJ_T0072236.1 MGP_LPJ_G0029592.1 mouse_genomes_project 5 89143549 89157741 + MGP_LPJ_P0072236 Csn1s2a protein_coding protein_coding MGP_LPJ_T0072237.1 MGP_LPJ_G0029592.1 mouse_genomes_project 5 89143549 89157741 + MGP_LPJ_P0072237 Csn1s2a protein_coding protein_coding MGP_LPJ_T0072238.1 MGP_LPJ_G0029592.1 mouse_genomes_project 5 89143549 89157642 + MGP_LPJ_P0072238 Csn1s2a protein_coding protein_coding MGP_LPJ_T0072239.1 MGP_LPJ_G0029592.1 mouse_genomes_project 5 89143563 89157642 + MGP_LPJ_P0072239 Csn1s2a protein_coding protein_coding MGP_LPJ_T0072240.1 MGP_LPJ_G0029592.1 mouse_genomes_project 5 89143564 89149573 + Csn1s2a protein_coding retained_intron MGP_LPJ_T0072241.1 MGP_LPJ_G0029592.1 mouse_genomes_project 5 89144766 89147794 + Csn1s2a protein_coding retained_intron MGP_LPJ_T0072242.1 MGP_LPJ_G0029592.1 mouse_genomes_project 5 89146451 89149385 + Csn1s2a protein_coding retained_intron MGP_LPJ_T0072243.1 MGP_LPJ_G0029592.1 mouse_genomes_project 5 89148594 89150844 + Csn1s2a protein_coding retained_intron MGP_LPJ_T0072244.1 MGP_LPJ_G0029592.1 mouse_genomes_project 5 89150814 89157720 + Csn1s2a protein_coding retained_intron MGP_LPJ_T0072245.1 MGP_LPJ_G0029592.1 mouse_genomes_project 5 89154118 89156055 + Csn1s2a protein_coding retained_intron MGP_LPJ_T0099608.1 MGP_LPJ_G0037871.1 mouse_genomes_project 5 113790322 113790429 + Gm22583 snRNA snRNA MGP_LPJ_T0015015.1 MGP_LPJ_G0013106.1 mouse_genomes_project 5 89946607 89946719 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001522.1 MGP_LPJ_G0001437.1 mouse_genomes_project 5 29933923 29935311 + TEC TEC MGP_LPJ_T0004887.1 MGP_LPJ_G0004205.1 mouse_genomes_project 5 142758100 142766574 + Gm17112 antisense antisense MGP_LPJ_T0001911.1 MGP_LPJ_G0001821.1 mouse_genomes_project 5 140615160 140622261 - TEC TEC MGP_LPJ_T0018159.1 MGP_LPJ_G0015535.1 mouse_genomes_project 5 155875547 155946682 + Gm20488 processed_transcript processed_transcript MGP_LPJ_T0014818.1 MGP_LPJ_G0012909.1 mouse_genomes_project 5 13609182 13609584 + processed_pseudogene processed_pseudogene MGP_LPJ_T0072091.1 MGP_LPJ_G0029557.1 mouse_genomes_project 5 77938646 77961064 + MGP_LPJ_P0072091 Rest protein_coding protein_coding MGP_LPJ_T0072092.1 MGP_LPJ_G0029557.1 mouse_genomes_project 5 77939351 77961064 + MGP_LPJ_P0072092 Rest protein_coding protein_coding MGP_LPJ_T0070924.1 MGP_LPJ_G0029359.1 mouse_genomes_project 5 32783456 32801666 - MGP_LPJ_P0070924 Haus3 protein_coding protein_coding MGP_LPJ_T0070925.1 MGP_LPJ_G0029359.1 mouse_genomes_project 5 32793653 32801587 - Haus3 protein_coding retained_intron MGP_LPJ_T0070926.1 MGP_LPJ_G0029359.1 mouse_genomes_project 5 32793892 32795753 - Haus3 protein_coding processed_transcript MGP_LPJ_T0070927.1 MGP_LPJ_G0029359.1 mouse_genomes_project 5 32800070 32801591 - Haus3 protein_coding processed_transcript MGP_LPJ_T0070928.1 MGP_LPJ_G0029359.1 mouse_genomes_project 5 32800162 32801642 - MGP_LPJ_P0070928 Haus3 protein_coding protein_coding MGP_LPJ_T0070929.1 MGP_LPJ_G0029359.1 mouse_genomes_project 5 32800375 32801572 - MGP_LPJ_P0070929 Haus3 protein_coding protein_coding MGP_LPJ_T0075492.1 MGP_LPJ_G0030237.1 mouse_genomes_project 5 149488765 149507914 + MGP_LPJ_P0075492 protein_coding protein_coding MGP_LPJ_T0075493.1 MGP_LPJ_G0030237.1 mouse_genomes_project 5 149488765 149507914 + MGP_LPJ_P0075493 protein_coding protein_coding MGP_LPJ_T0075494.1 MGP_LPJ_G0030237.1 mouse_genomes_project 5 149488767 149507920 + MGP_LPJ_P0075494 protein_coding protein_coding MGP_LPJ_T0075495.1 MGP_LPJ_G0030237.1 mouse_genomes_project 5 149488767 149507920 + MGP_LPJ_P0075495 protein_coding protein_coding MGP_LPJ_T0075496.1 MGP_LPJ_G0030237.1 mouse_genomes_project 5 149488805 149491994 + MGP_LPJ_P0075496 protein_coding protein_coding MGP_LPJ_T0075497.1 MGP_LPJ_G0030237.1 mouse_genomes_project 5 149488820 149507916 + MGP_LPJ_P0075497 protein_coding protein_coding MGP_LPJ_T0075498.1 MGP_LPJ_G0030237.1 mouse_genomes_project 5 149488820 149507914 + MGP_LPJ_P0075498 protein_coding nonsense_mediated_decay MGP_LPJ_T0075499.1 MGP_LPJ_G0030237.1 mouse_genomes_project 5 149488821 149490935 + protein_coding retained_intron MGP_LPJ_T0075500.1 MGP_LPJ_G0030237.1 mouse_genomes_project 5 149489099 149491989 + protein_coding processed_transcript MGP_LPJ_T0075721.1 MGP_LPJ_G0030293.1 mouse_genomes_project 5 153663360 153670769 - MGP_LPJ_P0075721 Urad protein_coding protein_coding MGP_LPJ_T0008302.1 MGP_LPJ_G0006755.1 mouse_genomes_project 5 114840839 114846148 + Gm16019 lincRNA lincRNA MGP_LPJ_T0099550.1 MGP_LPJ_G0037813.1 mouse_genomes_project 5 4246434 4246585 - Gm24525 snRNA snRNA MGP_LPJ_T0001780.1 MGP_LPJ_G0001692.1 mouse_genomes_project 5 111254217 111257500 - TEC TEC MGP_LPJ_T0008175.1 MGP_LPJ_G0006664.1 mouse_genomes_project 5 73692499 73699590 + Gm34411 lincRNA lincRNA MGP_LPJ_T0004798.1 MGP_LPJ_G0004141.1 mouse_genomes_project 5 113804112 113812367 + Gm15559 antisense antisense MGP_LPJ_T0070965.1 MGP_LPJ_G0029366.1 mouse_genomes_project 5 33185356 33212470 + MGP_LPJ_P0070965 Sh3bp2 protein_coding protein_coding MGP_LPJ_T0070966.1 MGP_LPJ_G0029366.1 mouse_genomes_project 5 33185364 33224411 + MGP_LPJ_P0070966 Sh3bp2 protein_coding protein_coding MGP_LPJ_T0070967.1 MGP_LPJ_G0029366.1 mouse_genomes_project 5 33202883 33218491 + Sh3bp2 protein_coding retained_intron MGP_LPJ_T0070968.1 MGP_LPJ_G0029366.1 mouse_genomes_project 5 33202883 33213516 + MGP_LPJ_P0070968 Sh3bp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0070969.1 MGP_LPJ_G0029366.1 mouse_genomes_project 5 33202883 33224395 + MGP_LPJ_P0070969 Sh3bp2 protein_coding protein_coding MGP_LPJ_T0070970.1 MGP_LPJ_G0029366.1 mouse_genomes_project 5 33209094 33224395 + MGP_LPJ_P0070970 Sh3bp2 protein_coding protein_coding MGP_LPJ_T0070971.1 MGP_LPJ_G0029366.1 mouse_genomes_project 5 33209206 33224408 + MGP_LPJ_P0070971 Sh3bp2 protein_coding protein_coding MGP_LPJ_T0070972.1 MGP_LPJ_G0029366.1 mouse_genomes_project 5 33212314 33213562 + Sh3bp2 protein_coding retained_intron MGP_LPJ_T0018072.1 MGP_LPJ_G0015508.1 mouse_genomes_project 5 28978123 28992608 - Gm9899 processed_transcript lincRNA MGP_LPJ_T0018073.1 MGP_LPJ_G0015508.1 mouse_genomes_project 5 28981603 28982162 - Gm9899 processed_transcript pseudogene MGP_LPJ_T0018074.1 MGP_LPJ_G0015508.1 mouse_genomes_project 5 28982085 28983992 - Gm9899 processed_transcript retained_intron MGP_LPJ_T0099573.1 MGP_LPJ_G0037836.1 mouse_genomes_project 5 54898782 54898945 - Gm24977 snRNA snRNA MGP_LPJ_T0071283.1 MGP_LPJ_G0029417.1 mouse_genomes_project 5 40637376 40726038 - MGP_LPJ_P0071283 Rab28 protein_coding protein_coding MGP_LPJ_T0071284.1 MGP_LPJ_G0029417.1 mouse_genomes_project 5 40637376 40726071 - MGP_LPJ_P0071284 Rab28 protein_coding protein_coding MGP_LPJ_T0071285.1 MGP_LPJ_G0029417.1 mouse_genomes_project 5 40637377 40726074 - MGP_LPJ_P0071285 Rab28 protein_coding protein_coding MGP_LPJ_T0071286.1 MGP_LPJ_G0029417.1 mouse_genomes_project 5 40638133 40639903 - Rab28 protein_coding retained_intron MGP_LPJ_T0071287.1 MGP_LPJ_G0029417.1 mouse_genomes_project 5 40638627 40641518 - Rab28 protein_coding retained_intron MGP_LPJ_T0098609.1 MGP_LPJ_G0036883.1 mouse_genomes_project 5 971935 973824 + Gm43031 sense_intronic sense_intronic MGP_LPJ_T0075539.1 MGP_LPJ_G0030246.1 mouse_genomes_project 5 149903078 149934864 - MGP_LPJ_P0075539 Ccz1 protein_coding protein_coding MGP_LPJ_T0075540.1 MGP_LPJ_G0030246.1 mouse_genomes_project 5 149906673 149907783 - Ccz1 protein_coding processed_transcript MGP_LPJ_T0075541.1 MGP_LPJ_G0030246.1 mouse_genomes_project 5 149907676 149922675 - Ccz1 protein_coding retained_intron MGP_LPJ_T0075542.1 MGP_LPJ_G0030246.1 mouse_genomes_project 5 149927284 149934888 - Ccz1 protein_coding retained_intron MGP_LPJ_T0075543.1 MGP_LPJ_G0030246.1 mouse_genomes_project 5 149932519 149934888 - Ccz1 protein_coding retained_intron MGP_LPJ_T0098277.1 MGP_LPJ_G0036558.1 mouse_genomes_project 5 123046603 123046720 + n-R5s175 rRNA rRNA MGP_LPJ_T0015020.1 MGP_LPJ_G0013111.1 mouse_genomes_project 5 92013375 92013933 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001497.1 MGP_LPJ_G0001414.1 mouse_genomes_project 5 17070210 17073335 - TEC TEC MGP_LPJ_T0070327.1 MGP_LPJ_G0029257.1 mouse_genomes_project 5 23370068 23409916 + MGP_LPJ_P0070327 Galntl5 protein_coding protein_coding MGP_LPJ_T0070328.1 MGP_LPJ_G0029257.1 mouse_genomes_project 5 23370110 23409914 + MGP_LPJ_P0070328 Galntl5 protein_coding protein_coding MGP_LPJ_T0018082.1 MGP_LPJ_G0015510.1 mouse_genomes_project 5 30073064 30181947 + Gm43809 processed_transcript processed_transcript MGP_LPJ_T0018083.1 MGP_LPJ_G0015510.1 mouse_genomes_project 5 30090984 30181927 + Gm43809 processed_transcript processed_transcript MGP_LPJ_T0075456.1 MGP_LPJ_G0030229.1 mouse_genomes_project 5 149172679 149195646 - MGP_LPJ_P0075456 Zfp316 protein_coding protein_coding MGP_LPJ_T0075457.1 MGP_LPJ_G0030229.1 mouse_genomes_project 5 149173271 149179184 - Zfp316 protein_coding retained_intron MGP_LPJ_T0075458.1 MGP_LPJ_G0030229.1 mouse_genomes_project 5 149174695 149195578 - MGP_LPJ_P0075458 Zfp316 protein_coding unknown_likely_coding MGP_LPJ_T0075459.1 MGP_LPJ_G0030229.1 mouse_genomes_project 5 149176192 149190295 - MGP_LPJ_P0075459 Zfp316 protein_coding protein_coding MGP_LPJ_T0001556.1 MGP_LPJ_G0001470.1 mouse_genomes_project 5 42879561 42882120 + TEC TEC MGP_LPJ_T0072276.1 MGP_LPJ_G0029608.1 mouse_genomes_project 5 89881155 89901355 + MGP_LPJ_P0072276 Enam protein_coding protein_coding MGP_LPJ_T0072277.1 MGP_LPJ_G0029608.1 mouse_genomes_project 5 89881162 89902674 + MGP_LPJ_P0072277 Enam protein_coding protein_coding MGP_LPJ_T0070860.1 MGP_LPJ_G0029350.1 mouse_genomes_project 5 32265823 32270436 - MGP_LPJ_P0070860 Tmem129 protein_coding protein_coding MGP_LPJ_T0070861.1 MGP_LPJ_G0029350.1 mouse_genomes_project 5 32265830 32270508 - Tmem129 protein_coding retained_intron MGP_LPJ_T0070862.1 MGP_LPJ_G0029350.1 mouse_genomes_project 5 32268166 32270465 - Tmem129 protein_coding retained_intron MGP_LPJ_T0073907.1 MGP_LPJ_G0029949.1 mouse_genomes_project 5 126496574 126532460 - MGP_LPJ_P0073907 Rad9b protein_coding protein_coding MGP_LPJ_T0073908.1 MGP_LPJ_G0029949.1 mouse_genomes_project 5 126498864 126529522 - MGP_LPJ_P0073908 Rad9b protein_coding protein_coding MGP_LPJ_T0073909.1 MGP_LPJ_G0029949.1 mouse_genomes_project 5 126498866 126532461 - MGP_LPJ_P0073909 Rad9b protein_coding protein_coding MGP_LPJ_T0073910.1 MGP_LPJ_G0029949.1 mouse_genomes_project 5 126529499 126531013 - MGP_LPJ_P0073910 Rad9b protein_coding protein_coding MGP_LPJ_T0073911.1 MGP_LPJ_G0029949.1 mouse_genomes_project 5 126530722 126532448 - Rad9b protein_coding retained_intron MGP_LPJ_T0075089.1 MGP_LPJ_G0030152.1 mouse_genomes_project 5 143162213 143171260 - MGP_LPJ_P0075089 protein_coding protein_coding MGP_LPJ_T0010695.1 MGP_LPJ_G0008813.1 mouse_genomes_project 5 33395548 33395668 - Mir467g miRNA miRNA MGP_LPJ_T0102174.1 MGP_LPJ_G0040211.1 mouse_genomes_project 5 49553690 49727725 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0075792.1 MGP_LPJ_G0030303.1 mouse_genomes_project 5 155359517 155466937 - MGP_LPJ_P0075792 Gm42791 protein_coding protein_coding MGP_LPJ_T0075795.1 MGP_LPJ_G0030303.1 mouse_genomes_project 5 155450895 155451551 - Gm42791 protein_coding processed_transcript MGP_LPJ_T0075547.1 MGP_LPJ_G0030248.1 mouse_genomes_project 5 150029564 150125316 + MGP_LPJ_P0075547 Lmtk2 protein_coding protein_coding MGP_LPJ_T0073190.1 MGP_LPJ_G0029812.1 mouse_genomes_project 5 115853439 116059808 - MGP_LPJ_P0073190 Myo18b protein_coding unknown_likely_coding MGP_LPJ_T0073191.1 MGP_LPJ_G0029812.1 mouse_genomes_project 5 115853446 116076643 - MGP_LPJ_P0073191 Myo18b protein_coding protein_coding MGP_LPJ_T0073192.1 MGP_LPJ_G0029812.1 mouse_genomes_project 5 115853448 115933931 - Myo18b protein_coding processed_transcript MGP_LPJ_T0073193.1 MGP_LPJ_G0029812.1 mouse_genomes_project 5 115942870 116050362 - Myo18b protein_coding processed_transcript MGP_LPJ_T0073194.1 MGP_LPJ_G0029812.1 mouse_genomes_project 5 115991536 116051272 - MGP_LPJ_P0073194 Myo18b protein_coding nonsense_mediated_decay MGP_LPJ_T0008053.1 MGP_LPJ_G0006576.1 mouse_genomes_project 5 3464578 3474040 + Gm43325 lincRNA lincRNA MGP_LPJ_T0073895.1 MGP_LPJ_G0029946.1 mouse_genomes_project 5 126361025 126399534 + MGP_LPJ_P0073895 Hvcn1 protein_coding protein_coding MGP_LPJ_T0073896.1 MGP_LPJ_G0029946.1 mouse_genomes_project 5 126363954 126411612 + MGP_LPJ_P0073896 Hvcn1 protein_coding protein_coding MGP_LPJ_T0073897.1 MGP_LPJ_G0029946.1 mouse_genomes_project 5 126364134 126407777 + MGP_LPJ_P0073897 Hvcn1 protein_coding protein_coding MGP_LPJ_T0073898.1 MGP_LPJ_G0029946.1 mouse_genomes_project 5 126364338 126403778 + MGP_LPJ_P0073898 Hvcn1 protein_coding protein_coding MGP_LPJ_T0073899.1 MGP_LPJ_G0029946.1 mouse_genomes_project 5 126364359 126411612 + MGP_LPJ_P0073899 Hvcn1 protein_coding protein_coding MGP_LPJ_T0098610.1 MGP_LPJ_G0036884.1 mouse_genomes_project 5 1784405 1787523 - Gm43112 sense_intronic sense_intronic MGP_LPJ_T0069792.1 MGP_LPJ_G0029165.1 mouse_genomes_project 5 504809 528294 + MGP_LPJ_P0069792 Tmbim7 protein_coding protein_coding MGP_LPJ_T0069793.1 MGP_LPJ_G0029165.1 mouse_genomes_project 5 511663 534695 + MGP_LPJ_P0069793 Tmbim7 protein_coding protein_coding MGP_LPJ_T0069794.1 MGP_LPJ_G0029165.1 mouse_genomes_project 5 511838 521746 + Tmbim7 protein_coding retained_intron MGP_LPJ_T0069795.1 MGP_LPJ_G0029165.1 mouse_genomes_project 5 511839 534823 + MGP_LPJ_P0069795 Tmbim7 protein_coding protein_coding MGP_LPJ_T0069796.1 MGP_LPJ_G0029165.1 mouse_genomes_project 5 516399 535604 + MGP_LPJ_P0069796 Tmbim7 protein_coding protein_coding MGP_LPJ_T0001848.1 MGP_LPJ_G0001760.1 mouse_genomes_project 5 127972939 127973471 + TEC TEC MGP_LPJ_T0004757.1 MGP_LPJ_G0004116.1 mouse_genomes_project 5 93837662 93850331 + Gm43599 antisense antisense MGP_LPJ_T0098628.1 MGP_LPJ_G0036902.1 mouse_genomes_project 5 113210285 113210993 + Gm43138 sense_intronic sense_intronic MGP_LPJ_T0071644.1 MGP_LPJ_G0029482.1 mouse_genomes_project 5 65770392 65872121 - MGP_LPJ_P0071644 protein_coding protein_coding MGP_LPJ_T0071645.1 MGP_LPJ_G0029482.1 mouse_genomes_project 5 65770394 65777754 - protein_coding retained_intron MGP_LPJ_T0071646.1 MGP_LPJ_G0029482.1 mouse_genomes_project 5 65772441 65786575 - MGP_LPJ_P0071646 protein_coding protein_coding MGP_LPJ_T0071647.1 MGP_LPJ_G0029482.1 mouse_genomes_project 5 65776172 65871719 - MGP_LPJ_P0071647 protein_coding unknown_likely_coding MGP_LPJ_T0071648.1 MGP_LPJ_G0029482.1 mouse_genomes_project 5 65781240 65871809 - MGP_LPJ_P0071648 protein_coding protein_coding MGP_LPJ_T0071649.1 MGP_LPJ_G0029482.1 mouse_genomes_project 5 65781396 65788523 - protein_coding retained_intron MGP_LPJ_T0071650.1 MGP_LPJ_G0029482.1 mouse_genomes_project 5 65788844 65819122 - protein_coding retained_intron MGP_LPJ_T0071651.1 MGP_LPJ_G0029482.1 mouse_genomes_project 5 65788859 65795618 - protein_coding retained_intron MGP_LPJ_T0071652.1 MGP_LPJ_G0029482.1 mouse_genomes_project 5 65789329 65796636 - protein_coding retained_intron MGP_LPJ_T0071653.1 MGP_LPJ_G0029482.1 mouse_genomes_project 5 65789796 65797067 - protein_coding retained_intron MGP_LPJ_T0071654.1 MGP_LPJ_G0029482.1 mouse_genomes_project 5 65804759 65805934 - protein_coding retained_intron MGP_LPJ_T0071655.1 MGP_LPJ_G0029482.1 mouse_genomes_project 5 65810818 65813768 - protein_coding retained_intron MGP_LPJ_T0071656.1 MGP_LPJ_G0029482.1 mouse_genomes_project 5 65814664 65872226 - protein_coding retained_intron MGP_LPJ_T0071657.1 MGP_LPJ_G0029482.1 mouse_genomes_project 5 65822779 65823929 - protein_coding retained_intron MGP_LPJ_T0071658.1 MGP_LPJ_G0029482.1 mouse_genomes_project 5 65835334 65870818 - protein_coding retained_intron MGP_LPJ_T0008236.1 MGP_LPJ_G0006714.1 mouse_genomes_project 5 101770227 101796050 - Gm43248 lincRNA lincRNA MGP_LPJ_T0008237.1 MGP_LPJ_G0006714.1 mouse_genomes_project 5 101782958 101795588 - Gm43248 lincRNA lincRNA MGP_LPJ_T0008366.1 MGP_LPJ_G0006800.1 mouse_genomes_project 5 127355708 127360092 - AI480526 lincRNA lincRNA MGP_LPJ_T0008368.1 MGP_LPJ_G0006800.1 mouse_genomes_project 5 127356274 127361328 - AI480526 lincRNA lincRNA MGP_LPJ_T0008369.1 MGP_LPJ_G0006800.1 mouse_genomes_project 5 127356445 127363923 - AI480526 lincRNA lincRNA MGP_LPJ_T0008370.1 MGP_LPJ_G0006800.1 mouse_genomes_project 5 127356825 127364513 - AI480526 lincRNA lincRNA MGP_LPJ_T0008372.1 MGP_LPJ_G0006800.1 mouse_genomes_project 5 127358208 127363936 - AI480526 lincRNA lincRNA MGP_LPJ_T0008373.1 MGP_LPJ_G0006800.1 mouse_genomes_project 5 127359453 127362270 - AI480526 lincRNA lincRNA MGP_LPJ_T0008374.1 MGP_LPJ_G0006800.1 mouse_genomes_project 5 127360025 127363914 - AI480526 lincRNA lincRNA MGP_LPJ_T0001488.1 MGP_LPJ_G0001405.1 mouse_genomes_project 5 12228677 12231577 + TEC TEC MGP_LPJ_T0004736.1 MGP_LPJ_G0004098.1 mouse_genomes_project 5 68205914 68215350 - 4930425K10Rik antisense antisense MGP_LPJ_T0070198.1 MGP_LPJ_G0029232.1 mouse_genomes_project 5 21911391 21919611 - MGP_LPJ_P0070198 Tomm7 protein_coding protein_coding MGP_LPJ_T0008460.1 MGP_LPJ_G0006863.1 mouse_genomes_project 5 155195213 155196513 + 2210417A02Rik lincRNA lincRNA MGP_LPJ_T0001521.1 MGP_LPJ_G0001436.1 mouse_genomes_project 5 29653552 29658558 - TEC TEC MGP_LPJ_T0001658.1 MGP_LPJ_G0001571.1 mouse_genomes_project 5 65552847 65555224 - TEC TEC MGP_LPJ_T0072206.1 MGP_LPJ_G0029586.1 mouse_genomes_project 5 88798046 88831927 - MGP_LPJ_P0072206 protein_coding protein_coding MGP_LPJ_T0072687.1 MGP_LPJ_G0029700.1 mouse_genomes_project 5 105097903 105399507 - MGP_LPJ_P0072687 Mapk10 protein_coding protein_coding MGP_LPJ_T0072688.1 MGP_LPJ_G0029700.1 mouse_genomes_project 5 105097905 105244905 - MGP_LPJ_P0072688 Mapk10 protein_coding protein_coding MGP_LPJ_T0072689.1 MGP_LPJ_G0029700.1 mouse_genomes_project 5 105097905 105399507 - MGP_LPJ_P0072689 Mapk10 protein_coding protein_coding MGP_LPJ_T0072690.1 MGP_LPJ_G0029700.1 mouse_genomes_project 5 105097905 105292970 - MGP_LPJ_P0072690 Mapk10 protein_coding protein_coding MGP_LPJ_T0072691.1 MGP_LPJ_G0029700.1 mouse_genomes_project 5 105103089 105394100 - MGP_LPJ_P0072691 Mapk10 protein_coding nonsense_mediated_decay MGP_LPJ_T0072692.1 MGP_LPJ_G0029700.1 mouse_genomes_project 5 105110238 105399446 - MGP_LPJ_P0072692 Mapk10 protein_coding protein_coding MGP_LPJ_T0072693.1 MGP_LPJ_G0029700.1 mouse_genomes_project 5 105173551 105212931 - MGP_LPJ_P0072693 Mapk10 protein_coding protein_coding MGP_LPJ_T0072694.1 MGP_LPJ_G0029700.1 mouse_genomes_project 5 105173861 105399507 - MGP_LPJ_P0072694 Mapk10 protein_coding protein_coding MGP_LPJ_T0072695.1 MGP_LPJ_G0029700.1 mouse_genomes_project 5 105349010 105399457 - Mapk10 protein_coding processed_transcript MGP_LPJ_T0072696.1 MGP_LPJ_G0029700.1 mouse_genomes_project 5 105393993 105397183 - Mapk10 protein_coding processed_transcript MGP_LPJ_T0072697.1 MGP_LPJ_G0029700.1 mouse_genomes_project 5 105393997 105399507 - Mapk10 protein_coding processed_transcript MGP_LPJ_T0072698.1 MGP_LPJ_G0029700.1 mouse_genomes_project 5 105397121 105399044 - Mapk10 protein_coding processed_transcript MGP_LPJ_T0072002.1 MGP_LPJ_G0029541.1 mouse_genomes_project 5 76735240 76747276 + Srd5a3 protein_coding retained_intron MGP_LPJ_T0072003.1 MGP_LPJ_G0029541.1 mouse_genomes_project 5 76735275 76735832 + Srd5a3 protein_coding processed_transcript MGP_LPJ_T0072004.1 MGP_LPJ_G0029541.1 mouse_genomes_project 5 76735297 76765773 + MGP_LPJ_P0072004 Srd5a3 protein_coding protein_coding MGP_LPJ_T0072005.1 MGP_LPJ_G0029541.1 mouse_genomes_project 5 76735669 76745559 + MGP_LPJ_P0072005 Srd5a3 protein_coding protein_coding MGP_LPJ_T0072006.1 MGP_LPJ_G0029541.1 mouse_genomes_project 5 76735699 76745751 + MGP_LPJ_P0072006 Srd5a3 protein_coding protein_coding MGP_LPJ_T0072007.1 MGP_LPJ_G0029541.1 mouse_genomes_project 5 76742445 76766209 + MGP_LPJ_P0072007 Srd5a3 protein_coding protein_coding MGP_LPJ_T0001582.1 MGP_LPJ_G0001496.1 mouse_genomes_project 5 47382966 47384579 + TEC TEC MGP_LPJ_T0011604.1 MGP_LPJ_G0009722.1 mouse_genomes_project 5 23376975 23377258 - Gm26356 misc_RNA misc_RNA MGP_LPJ_T0015106.1 MGP_LPJ_G0013197.1 mouse_genomes_project 5 129805682 129806862 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004825.1 MGP_LPJ_G0004160.1 mouse_genomes_project 5 121554748 121558539 - Gm26995 antisense antisense MGP_LPJ_T0074748.1 MGP_LPJ_G0030088.1 mouse_genomes_project 5 140564109 140567222 - MGP_LPJ_P0074748 Ccl24 protein_coding protein_coding MGP_LPJ_T0074749.1 MGP_LPJ_G0030088.1 mouse_genomes_project 5 140564752 140567222 - MGP_LPJ_P0074749 Ccl24 protein_coding protein_coding MGP_LPJ_T0008381.1 MGP_LPJ_G0006807.1 mouse_genomes_project 5 129580046 129618395 - Gm42637 lincRNA lincRNA MGP_LPJ_T0004907.1 MGP_LPJ_G0004217.1 mouse_genomes_project 5 149321829 149335132 - Gm20635 antisense antisense MGP_LPJ_T0001824.1 MGP_LPJ_G0001736.1 mouse_genomes_project 5 124383843 124384828 - TEC TEC MGP_LPJ_T0018105.1 MGP_LPJ_G0015518.1 mouse_genomes_project 5 65937709 65940585 - N4bp2os processed_transcript antisense MGP_LPJ_T0018106.1 MGP_LPJ_G0015518.1 mouse_genomes_project 5 65938163 65940076 - N4bp2os processed_transcript antisense MGP_LPJ_T0018107.1 MGP_LPJ_G0015518.1 mouse_genomes_project 5 65939090 65941097 - N4bp2os processed_transcript retained_intron MGP_LPJ_T0001583.1 MGP_LPJ_G0001497.1 mouse_genomes_project 5 47471334 47474753 + TEC TEC MGP_LPJ_T0071991.1 MGP_LPJ_G0029539.1 mouse_genomes_project 5 76153620 76232528 + MGP_LPJ_P0071991 Kit protein_coding protein_coding MGP_LPJ_T0071992.1 MGP_LPJ_G0029539.1 mouse_genomes_project 5 76153659 76232528 + MGP_LPJ_P0071992 Kit protein_coding protein_coding MGP_LPJ_T0071993.1 MGP_LPJ_G0029539.1 mouse_genomes_project 5 76189333 76199725 + Kit protein_coding retained_intron MGP_LPJ_T0071994.1 MGP_LPJ_G0029539.1 mouse_genomes_project 5 76215944 76217855 + Kit protein_coding retained_intron MGP_LPJ_T0071995.1 MGP_LPJ_G0029539.1 mouse_genomes_project 5 76219859 76221787 + Kit protein_coding retained_intron MGP_LPJ_T0071996.1 MGP_LPJ_G0029539.1 mouse_genomes_project 5 76221495 76228662 + Kit protein_coding retained_intron MGP_LPJ_T0071997.1 MGP_LPJ_G0029539.1 mouse_genomes_project 5 76224882 76232500 + Kit protein_coding retained_intron MGP_LPJ_T0071998.1 MGP_LPJ_G0029539.1 mouse_genomes_project 5 76224981 76228095 + Kit protein_coding retained_intron MGP_LPJ_T0073020.1 MGP_LPJ_G0029780.1 mouse_genomes_project 5 113103386 113130668 + MGP_LPJ_P0073020 Zfp605 protein_coding protein_coding MGP_LPJ_T0073021.1 MGP_LPJ_G0029780.1 mouse_genomes_project 5 113103630 113128333 + Zfp605 protein_coding processed_transcript MGP_LPJ_T0073022.1 MGP_LPJ_G0029780.1 mouse_genomes_project 5 113103645 113128291 + MGP_LPJ_P0073022 Zfp605 protein_coding protein_coding MGP_LPJ_T0073023.1 MGP_LPJ_G0029780.1 mouse_genomes_project 5 113105346 113129975 + MGP_LPJ_P0073023 Zfp605 protein_coding protein_coding MGP_LPJ_T0004771.1 MGP_LPJ_G0004123.1 mouse_genomes_project 5 102027486 102028578 + Gm17092 antisense antisense MGP_LPJ_T0001547.1 MGP_LPJ_G0001461.1 mouse_genomes_project 5 38352287 38353855 - TEC TEC MGP_LPJ_T0098624.1 MGP_LPJ_G0036898.1 mouse_genomes_project 5 94293778 94295016 + Gm20500 sense_intronic sense_intronic MGP_LPJ_T0001829.1 MGP_LPJ_G0001741.1 mouse_genomes_project 5 125506629 125507718 + TEC TEC MGP_LPJ_T0008438.1 MGP_LPJ_G0006844.1 mouse_genomes_project 5 146247454 146248361 - Gm42808 lincRNA lincRNA MGP_LPJ_T0102205.1 MGP_LPJ_G0040242.1 mouse_genomes_project 5 158142893 158155175 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0014871.1 MGP_LPJ_G0012962.1 mouse_genomes_project 5 26141421 26142403 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099566.1 MGP_LPJ_G0037829.1 mouse_genomes_project 5 33190167 33190272 + Gm22847 snRNA snRNA MGP_LPJ_T0073711.1 MGP_LPJ_G0029912.1 mouse_genomes_project 5 124494525 124500616 + MGP_LPJ_P0073711 Rasal1 protein_coding protein_coding MGP_LPJ_T0073712.1 MGP_LPJ_G0029912.1 mouse_genomes_project 5 124494535 124527646 + MGP_LPJ_P0073712 Rasal1 protein_coding protein_coding MGP_LPJ_T0073713.1 MGP_LPJ_G0029912.1 mouse_genomes_project 5 124494901 124527646 + MGP_LPJ_P0073713 Rasal1 protein_coding protein_coding MGP_LPJ_T0073714.1 MGP_LPJ_G0029912.1 mouse_genomes_project 5 124499082 124505366 + Rasal1 protein_coding processed_transcript MGP_LPJ_T0073715.1 MGP_LPJ_G0029912.1 mouse_genomes_project 5 124526641 124527355 + Rasal1 protein_coding retained_intron MGP_LPJ_T0074251.1 MGP_LPJ_G0029999.1 mouse_genomes_project 5 128846605 128854576 + MGP_LPJ_P0074251 Snrnp35 protein_coding protein_coding MGP_LPJ_T0074252.1 MGP_LPJ_G0029999.1 mouse_genomes_project 5 128846673 128853942 + MGP_LPJ_P0074252 Snrnp35 protein_coding protein_coding MGP_LPJ_T0074253.1 MGP_LPJ_G0029999.1 mouse_genomes_project 5 128846929 128854559 + MGP_LPJ_P0074253 Snrnp35 protein_coding protein_coding MGP_LPJ_T0072990.1 MGP_LPJ_G0029766.1 mouse_genomes_project 5 111508736 111527412 - MGP_LPJ_P0072990 Tmed11 protein_coding protein_coding MGP_LPJ_T0074191.1 MGP_LPJ_G0029992.1 mouse_genomes_project 5 128455677 128561518 - MGP_LPJ_P0074191 Pitpnm2 protein_coding protein_coding MGP_LPJ_T0074192.1 MGP_LPJ_G0029992.1 mouse_genomes_project 5 128455677 128594868 - MGP_LPJ_P0074192 Pitpnm2 protein_coding protein_coding MGP_LPJ_T0074193.1 MGP_LPJ_G0029992.1 mouse_genomes_project 5 128455678 128594559 - MGP_LPJ_P0074193 Pitpnm2 protein_coding protein_coding MGP_LPJ_T0074194.1 MGP_LPJ_G0029992.1 mouse_genomes_project 5 128456734 128530853 - MGP_LPJ_P0074194 Pitpnm2 protein_coding protein_coding MGP_LPJ_T0074195.1 MGP_LPJ_G0029992.1 mouse_genomes_project 5 128457281 128461526 - Pitpnm2 protein_coding retained_intron MGP_LPJ_T0074196.1 MGP_LPJ_G0029992.1 mouse_genomes_project 5 128458062 128459088 - Pitpnm2 protein_coding retained_intron MGP_LPJ_T0074197.1 MGP_LPJ_G0029992.1 mouse_genomes_project 5 128462188 128463605 - Pitpnm2 protein_coding retained_intron MGP_LPJ_T0074198.1 MGP_LPJ_G0029992.1 mouse_genomes_project 5 128473622 128533418 - MGP_LPJ_P0074198 Pitpnm2 protein_coding protein_coding MGP_LPJ_T0074199.1 MGP_LPJ_G0029992.1 mouse_genomes_project 5 128473795 128481078 - Pitpnm2 protein_coding retained_intron MGP_LPJ_T0074200.1 MGP_LPJ_G0029992.1 mouse_genomes_project 5 128484420 128528789 - MGP_LPJ_P0074200 Pitpnm2 protein_coding protein_coding MGP_LPJ_T0071977.1 MGP_LPJ_G0029535.1 mouse_genomes_project 5 75532372 75582570 - MGP_LPJ_P0071977 Chic2 protein_coding protein_coding MGP_LPJ_T0071978.1 MGP_LPJ_G0029535.1 mouse_genomes_project 5 75548554 75582108 - Chic2 protein_coding retained_intron MGP_LPJ_T0102171.1 MGP_LPJ_G0040208.1 mouse_genomes_project 5 263323 263491 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0001581.1 MGP_LPJ_G0001495.1 mouse_genomes_project 5 47312012 47314609 + TEC TEC MGP_LPJ_T0015014.1 MGP_LPJ_G0013105.1 mouse_genomes_project 5 89819999 89820548 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001577.1 MGP_LPJ_G0001491.1 mouse_genomes_project 5 44977716 44979732 - TEC TEC MGP_LPJ_T0072036.1 MGP_LPJ_G0029548.1 mouse_genomes_project 5 77292536 77294380 + MGP_LPJ_P0072036 C530008M17Rik protein_coding protein_coding MGP_LPJ_T0072037.1 MGP_LPJ_G0029548.1 mouse_genomes_project 5 77293707 77486340 + MGP_LPJ_P0072037 C530008M17Rik protein_coding protein_coding MGP_LPJ_T0072038.1 MGP_LPJ_G0029548.1 mouse_genomes_project 5 77293709 77295133 + C530008M17Rik protein_coding processed_transcript MGP_LPJ_T0072039.1 MGP_LPJ_G0029548.1 mouse_genomes_project 5 77293745 77432122 + C530008M17Rik protein_coding processed_transcript MGP_LPJ_T0072040.1 MGP_LPJ_G0029548.1 mouse_genomes_project 5 77392298 77522927 + MGP_LPJ_P0072040 C530008M17Rik protein_coding protein_coding MGP_LPJ_T0072041.1 MGP_LPJ_G0029548.1 mouse_genomes_project 5 77454240 77488048 + MGP_LPJ_P0072041 C530008M17Rik protein_coding protein_coding MGP_LPJ_T0072042.1 MGP_LPJ_G0029548.1 mouse_genomes_project 5 77486057 77523142 + MGP_LPJ_P0072042 C530008M17Rik protein_coding protein_coding MGP_LPJ_T0072043.1 MGP_LPJ_G0029548.1 mouse_genomes_project 5 77486057 77523151 + MGP_LPJ_P0072043 C530008M17Rik protein_coding protein_coding MGP_LPJ_T0072044.1 MGP_LPJ_G0029548.1 mouse_genomes_project 5 77486077 77488050 + MGP_LPJ_P0072044 C530008M17Rik protein_coding protein_coding MGP_LPJ_T0072045.1 MGP_LPJ_G0029548.1 mouse_genomes_project 5 77507971 77516088 + C530008M17Rik protein_coding retained_intron MGP_LPJ_T0072046.1 MGP_LPJ_G0029548.1 mouse_genomes_project 5 77515697 77518014 + MGP_LPJ_P0072046 C530008M17Rik protein_coding protein_coding MGP_LPJ_T0072047.1 MGP_LPJ_G0029548.1 mouse_genomes_project 5 77518784 77520271 + C530008M17Rik protein_coding processed_transcript MGP_LPJ_T0071366.1 MGP_LPJ_G0029432.1 mouse_genomes_project 5 44640990 44651375 + MGP_LPJ_P0071366 Clrn2 protein_coding protein_coding MGP_LPJ_T0001490.1 MGP_LPJ_G0001407.1 mouse_genomes_project 5 12236858 12242426 + TEC TEC MGP_LPJ_T0008248.1 MGP_LPJ_G0006721.1 mouse_genomes_project 5 103760513 103763574 + Gm20484 lincRNA lincRNA MGP_LPJ_T0070230.1 MGP_LPJ_G0029240.1 mouse_genomes_project 5 22539010 22543452 + MGP_LPJ_P0070230 Asic3 protein_coding protein_coding MGP_LPJ_T0070231.1 MGP_LPJ_G0029240.1 mouse_genomes_project 5 22539069 22543452 + Asic3 protein_coding retained_intron MGP_LPJ_T0070232.1 MGP_LPJ_G0029240.1 mouse_genomes_project 5 22539330 22543364 + MGP_LPJ_P0070232 Asic3 protein_coding protein_coding MGP_LPJ_T0070233.1 MGP_LPJ_G0029240.1 mouse_genomes_project 5 22541357 22543452 + Asic3 protein_coding retained_intron MGP_LPJ_T0070234.1 MGP_LPJ_G0029240.1 mouse_genomes_project 5 22542194 22543453 + MGP_LPJ_P0070234 Asic3 protein_coding nonsense_mediated_decay MGP_LPJ_T0075534.1 MGP_LPJ_G0030245.1 mouse_genomes_project 5 149840898 149900904 + MGP_LPJ_P0075534 Rsph10b protein_coding unknown_likely_coding MGP_LPJ_T0075535.1 MGP_LPJ_G0030245.1 mouse_genomes_project 5 149840906 149856148 + Rsph10b protein_coding processed_transcript MGP_LPJ_T0075536.1 MGP_LPJ_G0030245.1 mouse_genomes_project 5 149840933 149900900 + MGP_LPJ_P0075536 Rsph10b protein_coding protein_coding MGP_LPJ_T0075537.1 MGP_LPJ_G0030245.1 mouse_genomes_project 5 149844954 149856145 + MGP_LPJ_P0075537 Rsph10b protein_coding protein_coding MGP_LPJ_T0075538.1 MGP_LPJ_G0030245.1 mouse_genomes_project 5 149896403 149900709 + Rsph10b protein_coding processed_transcript MGP_LPJ_T0004903.1 MGP_LPJ_G0004215.1 mouse_genomes_project 5 147385826 147408796 - Gm16036 antisense antisense MGP_LPJ_T0001557.1 MGP_LPJ_G0001471.1 mouse_genomes_project 5 42881395 42883467 - TEC TEC MGP_LPJ_T0014814.1 MGP_LPJ_G0012905.1 mouse_genomes_project 5 10157733 10159299 - processed_pseudogene processed_pseudogene MGP_LPJ_T0072196.1 MGP_LPJ_G0029579.1 mouse_genomes_project 5 88347687 88379039 - MGP_LPJ_P0072196 Ugt2b36 protein_coding protein_coding MGP_LPJ_T0072197.1 MGP_LPJ_G0029579.1 mouse_genomes_project 5 88348198 88379032 - MGP_LPJ_P0072197 Ugt2b36 protein_coding protein_coding MGP_LPJ_T0072198.1 MGP_LPJ_G0029579.1 mouse_genomes_project 5 88348201 88377641 - Ugt2b36 protein_coding retained_intron MGP_LPJ_T0072199.1 MGP_LPJ_G0029579.1 mouse_genomes_project 5 88367467 88379030 - MGP_LPJ_P0072199 Ugt2b36 protein_coding protein_coding MGP_LPJ_T0072370.1 MGP_LPJ_G0029634.1 mouse_genomes_project 5 92396849 92403703 + Mthfd2l protein_coding processed_transcript MGP_LPJ_T0072371.1 MGP_LPJ_G0029634.1 mouse_genomes_project 5 92396988 92399155 + MGP_LPJ_P0072371 Mthfd2l protein_coding protein_coding MGP_LPJ_T0072372.1 MGP_LPJ_G0029634.1 mouse_genomes_project 5 92397012 92489280 + MGP_LPJ_P0072372 Mthfd2l protein_coding protein_coding MGP_LPJ_T0072373.1 MGP_LPJ_G0029634.1 mouse_genomes_project 5 92415990 92444703 + Mthfd2l protein_coding retained_intron MGP_LPJ_T0071754.1 MGP_LPJ_G0029494.1 mouse_genomes_project 5 67570649 67624058 + MGP_LPJ_P0071754 Slc30a9 protein_coding protein_coding MGP_LPJ_T0071755.1 MGP_LPJ_G0029494.1 mouse_genomes_project 5 67570649 67624055 + MGP_LPJ_P0071755 Slc30a9 protein_coding protein_coding MGP_LPJ_T0071756.1 MGP_LPJ_G0029494.1 mouse_genomes_project 5 67570658 67573453 + Slc30a9 protein_coding retained_intron MGP_LPJ_T0071757.1 MGP_LPJ_G0029494.1 mouse_genomes_project 5 67570659 67621401 + MGP_LPJ_P0071757 Slc30a9 protein_coding nonsense_mediated_decay MGP_LPJ_T0071758.1 MGP_LPJ_G0029494.1 mouse_genomes_project 5 67570878 67582591 + Slc30a9 protein_coding processed_transcript MGP_LPJ_T0071759.1 MGP_LPJ_G0029494.1 mouse_genomes_project 5 67579397 67605661 + MGP_LPJ_P0071759 Slc30a9 protein_coding nonsense_mediated_decay MGP_LPJ_T0071760.1 MGP_LPJ_G0029494.1 mouse_genomes_project 5 67579423 67592437 + MGP_LPJ_P0071760 Slc30a9 protein_coding protein_coding MGP_LPJ_T0071761.1 MGP_LPJ_G0029494.1 mouse_genomes_project 5 67596044 67618971 + Slc30a9 protein_coding retained_intron MGP_LPJ_T0071289.1 MGP_LPJ_G0029419.1 mouse_genomes_project 5 40812962 40872549 - MGP_LPJ_P0071289 Bod1l protein_coding protein_coding MGP_LPJ_T0071290.1 MGP_LPJ_G0029419.1 mouse_genomes_project 5 40812962 40872549 - MGP_LPJ_P0071290 Bod1l protein_coding protein_coding MGP_LPJ_T0071291.1 MGP_LPJ_G0029419.1 mouse_genomes_project 5 40847220 40850734 - Bod1l protein_coding processed_transcript MGP_LPJ_T0071292.1 MGP_LPJ_G0029419.1 mouse_genomes_project 5 40848112 40872526 - Bod1l protein_coding retained_intron MGP_LPJ_T0071791.1 MGP_LPJ_G0029503.1 mouse_genomes_project 5 69870628 69886861 + MGP_LPJ_P0071791 Guf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0071792.1 MGP_LPJ_G0029503.1 mouse_genomes_project 5 69870658 69880433 + Guf1 protein_coding retained_intron MGP_LPJ_T0071793.1 MGP_LPJ_G0029503.1 mouse_genomes_project 5 69870658 69880593 + MGP_LPJ_P0071793 Guf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0071794.1 MGP_LPJ_G0029503.1 mouse_genomes_project 5 69870666 69888235 + MGP_LPJ_P0071794 Guf1 protein_coding protein_coding MGP_LPJ_T0071795.1 MGP_LPJ_G0029503.1 mouse_genomes_project 5 69870693 69886862 + MGP_LPJ_P0071795 Guf1 protein_coding protein_coding MGP_LPJ_T0071796.1 MGP_LPJ_G0029503.1 mouse_genomes_project 5 69870778 69881449 + MGP_LPJ_P0071796 Guf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0071797.1 MGP_LPJ_G0029503.1 mouse_genomes_project 5 69870799 69886906 + MGP_LPJ_P0071797 Guf1 protein_coding protein_coding MGP_LPJ_T0071798.1 MGP_LPJ_G0029503.1 mouse_genomes_project 5 69880447 69891100 + Guf1 protein_coding retained_intron MGP_LPJ_T0074738.1 MGP_LPJ_G0030086.1 mouse_genomes_project 5 140389321 140535720 - MGP_LPJ_P0074738 Hip1 protein_coding protein_coding MGP_LPJ_T0074739.1 MGP_LPJ_G0030086.1 mouse_genomes_project 5 140389325 140421244 - MGP_LPJ_P0074739 Hip1 protein_coding protein_coding MGP_LPJ_T0074740.1 MGP_LPJ_G0030086.1 mouse_genomes_project 5 140414755 140415935 - Hip1 protein_coding retained_intron MGP_LPJ_T0074741.1 MGP_LPJ_G0030086.1 mouse_genomes_project 5 140416061 140426358 - MGP_LPJ_P0074741 Hip1 protein_coding nonsense_mediated_decay MGP_LPJ_T0074742.1 MGP_LPJ_G0030086.1 mouse_genomes_project 5 140420534 140535725 - Hip1 protein_coding retained_intron MGP_LPJ_T0074743.1 MGP_LPJ_G0030086.1 mouse_genomes_project 5 140424615 140438524 - Hip1 protein_coding processed_transcript MGP_LPJ_T0074744.1 MGP_LPJ_G0030086.1 mouse_genomes_project 5 140435726 140475913 - MGP_LPJ_P0074744 Hip1 protein_coding protein_coding MGP_LPJ_T0074745.1 MGP_LPJ_G0030086.1 mouse_genomes_project 5 140438407 140444279 - Hip1 protein_coding retained_intron MGP_LPJ_T0074746.1 MGP_LPJ_G0030086.1 mouse_genomes_project 5 140445154 140535720 - Hip1 protein_coding retained_intron MGP_LPJ_T0018131.1 MGP_LPJ_G0015528.1 mouse_genomes_project 5 127628969 127630374 + 5830487J09Rik processed_transcript sense_intronic MGP_LPJ_T0018132.1 MGP_LPJ_G0015528.1 mouse_genomes_project 5 127629424 127631333 + 5830487J09Rik processed_transcript TEC MGP_LPJ_T0099551.1 MGP_LPJ_G0037814.1 mouse_genomes_project 5 6332659 6332826 + Gm24666 snRNA snRNA MGP_LPJ_T0072182.1 MGP_LPJ_G0029575.1 mouse_genomes_project 5 88076395 88125861 + MGP_LPJ_P0072182 Ythdc1 protein_coding protein_coding MGP_LPJ_T0072183.1 MGP_LPJ_G0029575.1 mouse_genomes_project 5 88076407 88125866 + MGP_LPJ_P0072183 Ythdc1 protein_coding protein_coding MGP_LPJ_T0072184.1 MGP_LPJ_G0029575.1 mouse_genomes_project 5 88076670 88125866 + MGP_LPJ_P0072184 Ythdc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0072185.1 MGP_LPJ_G0029575.1 mouse_genomes_project 5 88076738 88123308 + MGP_LPJ_P0072185 Ythdc1 protein_coding unknown_likely_coding MGP_LPJ_T0072186.1 MGP_LPJ_G0029575.1 mouse_genomes_project 5 88076738 88125864 + MGP_LPJ_P0072186 Ythdc1 protein_coding protein_coding MGP_LPJ_T0072187.1 MGP_LPJ_G0029575.1 mouse_genomes_project 5 88078582 88095781 + Ythdc1 protein_coding retained_intron MGP_LPJ_T0072188.1 MGP_LPJ_G0029575.1 mouse_genomes_project 5 88101695 88125866 + Ythdc1 protein_coding retained_intron MGP_LPJ_T0072189.1 MGP_LPJ_G0029575.1 mouse_genomes_project 5 88109908 88115057 + Ythdc1 protein_coding retained_intron MGP_LPJ_T0072190.1 MGP_LPJ_G0029575.1 mouse_genomes_project 5 88116041 88123132 + Ythdc1 protein_coding processed_transcript MGP_LPJ_T0072191.1 MGP_LPJ_G0029575.1 mouse_genomes_project 5 88118486 88125864 + Ythdc1 protein_coding retained_intron MGP_LPJ_T0071288.1 MGP_LPJ_G0029418.1 mouse_genomes_project 5 40785128 40788155 - MGP_LPJ_P0071288 Nkx3-2 protein_coding protein_coding MGP_LPJ_T0015172.1 MGP_LPJ_G0013263.1 mouse_genomes_project 5 157040600 157041163 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010737.1 MGP_LPJ_G0008855.1 mouse_genomes_project 5 129853471 129853548 + Gm27551 miRNA miRNA MGP_LPJ_T0071061.1 MGP_LPJ_G0029377.1 mouse_genomes_project 5 33979738 33983183 + MGP_LPJ_P0071061 Adra2c protein_coding protein_coding MGP_LPJ_T0074654.1 MGP_LPJ_G0030068.1 mouse_genomes_project 5 139842359 139843637 - MGP_LPJ_P0074654 Cldn13 protein_coding protein_coding MGP_LPJ_T0074440.1 MGP_LPJ_G0030035.1 mouse_genomes_project 5 134429695 134450786 + MGP_LPJ_P0074440 Sumf2 protein_coding protein_coding MGP_LPJ_T0074441.1 MGP_LPJ_G0030035.1 mouse_genomes_project 5 134429720 134439283 + MGP_LPJ_P0074441 Sumf2 protein_coding protein_coding MGP_LPJ_T0074442.1 MGP_LPJ_G0030035.1 mouse_genomes_project 5 134429729 134439373 + Sumf2 protein_coding processed_transcript MGP_LPJ_T0074443.1 MGP_LPJ_G0030035.1 mouse_genomes_project 5 134429729 134450190 + MGP_LPJ_P0074443 Sumf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074444.1 MGP_LPJ_G0030035.1 mouse_genomes_project 5 134437047 134449557 + Sumf2 protein_coding processed_transcript MGP_LPJ_T0074445.1 MGP_LPJ_G0030035.1 mouse_genomes_project 5 134437047 134449557 + Sumf2 protein_coding processed_transcript MGP_LPJ_T0001778.1 MGP_LPJ_G0001690.1 mouse_genomes_project 5 110507173 110508333 + TEC TEC MGP_LPJ_T0001837.1 MGP_LPJ_G0001749.1 mouse_genomes_project 5 126670034 126672922 - TEC TEC MGP_LPJ_T0074451.1 MGP_LPJ_G0030037.1 mouse_genomes_project 5 134502115 134509934 + MGP_LPJ_P0074451 Zbed5 protein_coding protein_coding MGP_LPJ_T0008129.1 MGP_LPJ_G0006624.1 mouse_genomes_project 5 38904252 38916227 - Gm35191 lincRNA lincRNA MGP_LPJ_T0001884.1 MGP_LPJ_G0001795.1 mouse_genomes_project 5 136706591 136707339 - TEC TEC MGP_LPJ_T0100827.1 MGP_LPJ_G0039090.1 mouse_genomes_project 5 54395639 54395768 + Gm24235 snoRNA snoRNA MGP_LPJ_T0008439.1 MGP_LPJ_G0006845.1 mouse_genomes_project 5 146319026 146319789 - Gm43703 lincRNA lincRNA MGP_LPJ_T0070294.1 MGP_LPJ_G0029251.1 mouse_genomes_project 5 22735918 22747051 - Smarcd3 protein_coding retained_intron MGP_LPJ_T0070295.1 MGP_LPJ_G0029251.1 mouse_genomes_project 5 22737722 22769235 - MGP_LPJ_P0070295 Smarcd3 protein_coding protein_coding MGP_LPJ_T0070296.1 MGP_LPJ_G0029251.1 mouse_genomes_project 5 22737722 22747087 - MGP_LPJ_P0070296 Smarcd3 protein_coding protein_coding MGP_LPJ_T0070298.1 MGP_LPJ_G0029251.1 mouse_genomes_project 5 22739796 22741951 - Smarcd3 protein_coding retained_intron MGP_LPJ_T0070299.1 MGP_LPJ_G0029251.1 mouse_genomes_project 5 22740265 22747010 - Smarcd3 protein_coding retained_intron MGP_LPJ_T0070300.1 MGP_LPJ_G0029251.1 mouse_genomes_project 5 22740836 22744043 - Smarcd3 protein_coding retained_intron MGP_LPJ_T0070301.1 MGP_LPJ_G0029251.1 mouse_genomes_project 5 22740847 22742091 - Smarcd3 protein_coding retained_intron MGP_LPJ_T0070302.1 MGP_LPJ_G0029251.1 mouse_genomes_project 5 22740968 22746975 - Smarcd3 protein_coding retained_intron MGP_LPJ_T0070303.1 MGP_LPJ_G0029251.1 mouse_genomes_project 5 22767349 22767960 - Smarcd3 protein_coding processed_transcript MGP_LPJ_T0014916.1 MGP_LPJ_G0013007.1 mouse_genomes_project 5 44864269 44864894 - processed_pseudogene processed_pseudogene MGP_LPJ_T0074716.1 MGP_LPJ_G0030080.1 mouse_genomes_project 5 140135769 140197638 + MGP_LPJ_P0074716 Baz1b protein_coding protein_coding MGP_LPJ_T0074717.1 MGP_LPJ_G0030080.1 mouse_genomes_project 5 140146920 140149938 + Baz1b protein_coding retained_intron MGP_LPJ_T0074718.1 MGP_LPJ_G0030080.1 mouse_genomes_project 5 140156090 140162018 + Baz1b protein_coding retained_intron MGP_LPJ_T0074719.1 MGP_LPJ_G0030080.1 mouse_genomes_project 5 140158565 140168215 + Baz1b protein_coding retained_intron MGP_LPJ_T0074720.1 MGP_LPJ_G0030080.1 mouse_genomes_project 5 140193897 140195691 + Baz1b protein_coding retained_intron MGP_LPJ_T0099628.1 MGP_LPJ_G0037891.1 mouse_genomes_project 5 147356437 147356544 - Gm24131 snRNA snRNA MGP_LPJ_T0070344.1 MGP_LPJ_G0029261.1 mouse_genomes_project 5 23711709 23713670 + MGP_LPJ_P0070344 Cct8l1 protein_coding protein_coding MGP_LPJ_T0015042.1 MGP_LPJ_G0013133.1 mouse_genomes_project 5 105137509 105137764 - processed_pseudogene processed_pseudogene MGP_LPJ_T0072472.1 MGP_LPJ_G0029655.1 mouse_genomes_project 5 94155500 94157330 + MGP_LPJ_P0072472 Stbd1 protein_coding protein_coding MGP_LPJ_T0072473.1 MGP_LPJ_G0029655.1 mouse_genomes_project 5 94155510 94159090 + MGP_LPJ_P0072473 Stbd1 protein_coding protein_coding MGP_LPJ_T0072474.1 MGP_LPJ_G0029655.1 mouse_genomes_project 5 94155527 94158805 + MGP_LPJ_P0072474 Stbd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0073150.1 MGP_LPJ_G0029803.1 mouse_genomes_project 5 115396909 115410640 + MGP_LPJ_P0073150 Crybb1 protein_coding protein_coding MGP_LPJ_T0073151.1 MGP_LPJ_G0029803.1 mouse_genomes_project 5 115396939 115410512 + MGP_LPJ_P0073151 Crybb1 protein_coding protein_coding MGP_LPJ_T0073152.1 MGP_LPJ_G0029803.1 mouse_genomes_project 5 115396968 115410557 + MGP_LPJ_P0073152 Crybb1 protein_coding protein_coding MGP_LPJ_T0004791.1 MGP_LPJ_G0004135.1 mouse_genomes_project 5 111495032 111500471 + 1700047L14Rik antisense antisense MGP_LPJ_T0101353.1 MGP_LPJ_G0039556.1 mouse_genomes_project 5 50046961 50051075 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0001518.1 MGP_LPJ_G0001434.1 mouse_genomes_project 5 29319852 29322132 + TEC TEC MGP_LPJ_T0074693.1 MGP_LPJ_G0030075.1 mouse_genomes_project 5 140006063 140007720 + MGP_LPJ_P0074693 Dnajc30 protein_coding protein_coding MGP_LPJ_T0014954.1 MGP_LPJ_G0013045.1 mouse_genomes_project 5 61970182 61970798 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008145.1 MGP_LPJ_G0006639.1 mouse_genomes_project 5 51539030 51540242 + Gm43177 lincRNA lincRNA MGP_LPJ_T0010703.1 MGP_LPJ_G0008821.1 mouse_genomes_project 5 64703616 64703733 - Gm25306 miRNA miRNA MGP_LPJ_T0098631.1 MGP_LPJ_G0036905.1 mouse_genomes_project 5 126584545 126588646 + Gm42829 sense_intronic sense_intronic MGP_LPJ_T0098616.1 MGP_LPJ_G0036890.1 mouse_genomes_project 5 21719791 21720599 - Gm43566 sense_intronic sense_intronic MGP_LPJ_T0011629.1 MGP_LPJ_G0009747.1 mouse_genomes_project 5 145486679 145487000 + Gm24146 misc_RNA misc_RNA MGP_LPJ_T0001661.1 MGP_LPJ_G0001574.1 mouse_genomes_project 5 65644738 65645658 + TEC TEC MGP_LPJ_T0004686.1 MGP_LPJ_G0004058.1 mouse_genomes_project 5 32744516 32762464 + 4930557J02Rik antisense antisense MGP_LPJ_T0075700.1 MGP_LPJ_G0030286.1 mouse_genomes_project 5 153264662 153271620 + MGP_LPJ_P0075700 Gtf3a protein_coding protein_coding MGP_LPJ_T0075701.1 MGP_LPJ_G0030286.1 mouse_genomes_project 5 153264703 153271609 + Gtf3a protein_coding retained_intron MGP_LPJ_T0075702.1 MGP_LPJ_G0030286.1 mouse_genomes_project 5 153264710 153271612 + MGP_LPJ_P0075702 Gtf3a protein_coding protein_coding MGP_LPJ_T0075703.1 MGP_LPJ_G0030286.1 mouse_genomes_project 5 153266012 153271609 + Gtf3a protein_coding retained_intron MGP_LPJ_T0011602.1 MGP_LPJ_G0009720.1 mouse_genomes_project 5 21523153 21523483 - Gm25219 misc_RNA misc_RNA MGP_LPJ_T0073051.1 MGP_LPJ_G0029785.1 mouse_genomes_project 5 113279365 113292526 - MGP_LPJ_P0073051 Pxmp2 protein_coding protein_coding MGP_LPJ_T0073052.1 MGP_LPJ_G0029785.1 mouse_genomes_project 5 113279378 113292361 - MGP_LPJ_P0073052 Pxmp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0073053.1 MGP_LPJ_G0029785.1 mouse_genomes_project 5 113286908 113292342 - Pxmp2 protein_coding processed_transcript MGP_LPJ_T0073054.1 MGP_LPJ_G0029785.1 mouse_genomes_project 5 113289859 113292459 - Pxmp2 protein_coding retained_intron MGP_LPJ_T0014886.1 MGP_LPJ_G0012977.1 mouse_genomes_project 5 31395048 31395334 + processed_pseudogene processed_pseudogene MGP_LPJ_T0072104.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 81956670 82361064 + Adgrl3 protein_coding retained_intron MGP_LPJ_T0072105.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 81958573 82777276 + MGP_LPJ_P0072105 Adgrl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0072106.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 81958753 82665464 + Adgrl3 protein_coding retained_intron MGP_LPJ_T0072107.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 81958756 82665461 + Adgrl3 protein_coding retained_intron MGP_LPJ_T0072108.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 81958997 82007647 + Adgrl3 protein_coding retained_intron MGP_LPJ_T0072109.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 81959200 82440573 + Adgrl3 protein_coding retained_intron MGP_LPJ_T0072110.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 81959203 82773605 + MGP_LPJ_P0072110 Adgrl3 protein_coding protein_coding MGP_LPJ_T0072111.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 81959241 82777287 + MGP_LPJ_P0072111 Adgrl3 protein_coding protein_coding MGP_LPJ_T0072112.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 81959594 82777277 + MGP_LPJ_P0072112 Adgrl3 protein_coding protein_coding MGP_LPJ_T0072113.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 81959792 82170868 + Adgrl3 protein_coding processed_transcript MGP_LPJ_T0072114.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 81959793 82777276 + Adgrl3 protein_coding processed_transcript MGP_LPJ_T0072115.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 81959811 82548675 + Adgrl3 protein_coding retained_intron MGP_LPJ_T0072116.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 82281983 82775984 + MGP_LPJ_P0072116 Adgrl3 protein_coding protein_coding MGP_LPJ_T0072117.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 82281984 82775984 + MGP_LPJ_P0072117 Adgrl3 protein_coding protein_coding MGP_LPJ_T0072118.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 82281984 82775984 + MGP_LPJ_P0072118 Adgrl3 protein_coding protein_coding MGP_LPJ_T0072119.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 82281984 82775984 + MGP_LPJ_P0072119 Adgrl3 protein_coding protein_coding MGP_LPJ_T0072120.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 82281984 82775984 + MGP_LPJ_P0072120 Adgrl3 protein_coding protein_coding MGP_LPJ_T0072121.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 82281984 82775984 + MGP_LPJ_P0072121 Adgrl3 protein_coding protein_coding MGP_LPJ_T0072122.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 82281984 82775984 + MGP_LPJ_P0072122 Adgrl3 protein_coding protein_coding MGP_LPJ_T0072123.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 82281984 82775984 + MGP_LPJ_P0072123 Adgrl3 protein_coding protein_coding MGP_LPJ_T0072124.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 82281984 82775984 + MGP_LPJ_P0072124 Adgrl3 protein_coding protein_coding MGP_LPJ_T0072125.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 82281992 82323415 + Adgrl3 protein_coding processed_transcript MGP_LPJ_T0072126.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 82282022 82775853 + MGP_LPJ_P0072126 Adgrl3 protein_coding protein_coding MGP_LPJ_T0072127.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 82282022 82775853 + MGP_LPJ_P0072127 Adgrl3 protein_coding protein_coding MGP_LPJ_T0072128.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 82282022 82776524 + MGP_LPJ_P0072128 Adgrl3 protein_coding protein_coding MGP_LPJ_T0072129.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 82282022 82775853 + MGP_LPJ_P0072129 Adgrl3 protein_coding protein_coding MGP_LPJ_T0072130.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 82282047 82776353 + MGP_LPJ_P0072130 Adgrl3 protein_coding protein_coding MGP_LPJ_T0072131.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 82282135 82777276 + MGP_LPJ_P0072131 Adgrl3 protein_coding protein_coding MGP_LPJ_T0072132.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 82282135 82777276 + MGP_LPJ_P0072132 Adgrl3 protein_coding protein_coding MGP_LPJ_T0072133.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 82618875 82665243 + Adgrl3 protein_coding processed_transcript MGP_LPJ_T0072134.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 82632373 82633743 + Adgrl3 protein_coding retained_intron MGP_LPJ_T0072135.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 82632732 82777276 + MGP_LPJ_P0072135 Adgrl3 protein_coding protein_coding MGP_LPJ_T0072136.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 82700853 82702948 + Adgrl3 protein_coding retained_intron MGP_LPJ_T0072137.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 82750695 82808002 + Adgrl3 protein_coding processed_transcript MGP_LPJ_T0072138.1 MGP_LPJ_G0029561.1 mouse_genomes_project 5 82771340 82774224 + Adgrl3 protein_coding retained_intron MGP_LPJ_T0001681.1 MGP_LPJ_G0001594.1 mouse_genomes_project 5 66671246 66671924 - TEC TEC MGP_LPJ_T0014844.1 MGP_LPJ_G0012935.1 mouse_genomes_project 5 20700264 20700637 - processed_pseudogene processed_pseudogene MGP_LPJ_T0072558.1 MGP_LPJ_G0029676.1 mouse_genomes_project 5 100525122 100526172 + MGP_LPJ_P0072558 Gm11111 protein_coding protein_coding MGP_LPJ_T0004814.1 MGP_LPJ_G0004152.1 mouse_genomes_project 5 118871068 118871647 - 4930430O22Rik antisense antisense MGP_LPJ_T0004815.1 MGP_LPJ_G0004152.1 mouse_genomes_project 5 118871070 118871609 - 4930430O22Rik antisense antisense MGP_LPJ_T0008147.1 MGP_LPJ_G0006641.1 mouse_genomes_project 5 51774437 51774712 - Gm43179 lincRNA lincRNA MGP_LPJ_T0001729.1 MGP_LPJ_G0001641.1 mouse_genomes_project 5 76433800 76435922 + TEC TEC MGP_LPJ_T0100855.1 MGP_LPJ_G0039118.1 mouse_genomes_project 5 110557824 110557956 + Gm22270 snoRNA snoRNA MGP_LPJ_T0014979.1 MGP_LPJ_G0013070.1 mouse_genomes_project 5 73834608 73835630 - processed_pseudogene processed_pseudogene MGP_LPJ_T0074758.1 MGP_LPJ_G0030091.1 mouse_genomes_project 5 140676571 140744178 + MGP_LPJ_P0074758 Por protein_coding protein_coding MGP_LPJ_T0074759.1 MGP_LPJ_G0030091.1 mouse_genomes_project 5 140681148 140692866 + Por protein_coding processed_transcript MGP_LPJ_T0074760.1 MGP_LPJ_G0030091.1 mouse_genomes_project 5 140681152 140743634 + MGP_LPJ_P0074760 Por protein_coding protein_coding MGP_LPJ_T0074761.1 MGP_LPJ_G0030091.1 mouse_genomes_project 5 140697241 140747843 + MGP_LPJ_P0074761 Por protein_coding protein_coding MGP_LPJ_T0074762.1 MGP_LPJ_G0030091.1 mouse_genomes_project 5 140697363 140747843 + MGP_LPJ_P0074762 Por protein_coding protein_coding MGP_LPJ_T0074763.1 MGP_LPJ_G0030091.1 mouse_genomes_project 5 140727362 140744395 + Por protein_coding retained_intron MGP_LPJ_T0074764.1 MGP_LPJ_G0030091.1 mouse_genomes_project 5 140738205 140742758 + MGP_LPJ_P0074764 Por protein_coding protein_coding MGP_LPJ_T0074765.1 MGP_LPJ_G0030091.1 mouse_genomes_project 5 140744066 140746432 + Por protein_coding retained_intron MGP_LPJ_T0074766.1 MGP_LPJ_G0030091.1 mouse_genomes_project 5 140745697 140746564 + Por protein_coding retained_intron MGP_LPJ_T0070833.1 MGP_LPJ_G0029344.1 mouse_genomes_project 5 31924081 31961853 + MGP_LPJ_P0070833 Maea protein_coding protein_coding MGP_LPJ_T0070834.1 MGP_LPJ_G0029344.1 mouse_genomes_project 5 31924133 31951256 + MGP_LPJ_P0070834 Maea protein_coding protein_coding MGP_LPJ_T0070835.1 MGP_LPJ_G0029344.1 mouse_genomes_project 5 31924137 31948925 + MGP_LPJ_P0070835 Maea protein_coding nonsense_mediated_decay MGP_LPJ_T0070836.1 MGP_LPJ_G0029344.1 mouse_genomes_project 5 31924757 31948976 + MGP_LPJ_P0070836 Maea protein_coding protein_coding MGP_LPJ_T0070837.1 MGP_LPJ_G0029344.1 mouse_genomes_project 5 31951131 31960378 + Maea protein_coding retained_intron MGP_LPJ_T0070838.1 MGP_LPJ_G0029344.1 mouse_genomes_project 5 31960153 31961106 + Maea protein_coding retained_intron MGP_LPJ_T0008333.1 MGP_LPJ_G0006773.1 mouse_genomes_project 5 119098698 119099466 - 1110006O24Rik lincRNA lincRNA MGP_LPJ_T0099601.1 MGP_LPJ_G0037864.1 mouse_genomes_project 5 105869835 105870006 + Gm25721 snRNA snRNA MGP_LPJ_T0074320.1 MGP_LPJ_G0030011.1 mouse_genomes_project 5 129623791 129699066 - MGP_LPJ_P0074320 Scarb1 protein_coding protein_coding MGP_LPJ_T0074321.1 MGP_LPJ_G0030011.1 mouse_genomes_project 5 129623793 129699043 - MGP_LPJ_P0074321 Scarb1 protein_coding protein_coding MGP_LPJ_T0074322.1 MGP_LPJ_G0030011.1 mouse_genomes_project 5 129624270 129642343 - MGP_LPJ_P0074322 Scarb1 protein_coding protein_coding MGP_LPJ_T0074323.1 MGP_LPJ_G0030011.1 mouse_genomes_project 5 129624491 129632397 - Scarb1 protein_coding processed_transcript MGP_LPJ_T0074324.1 MGP_LPJ_G0030011.1 mouse_genomes_project 5 129631187 129634913 - Scarb1 protein_coding retained_intron MGP_LPJ_T0074325.1 MGP_LPJ_G0030011.1 mouse_genomes_project 5 129631592 129698991 - Scarb1 protein_coding retained_intron MGP_LPJ_T0074326.1 MGP_LPJ_G0030011.1 mouse_genomes_project 5 129645365 129657885 - Scarb1 protein_coding retained_intron MGP_LPJ_T0074327.1 MGP_LPJ_G0030011.1 mouse_genomes_project 5 129648497 129670029 - Scarb1 protein_coding processed_transcript MGP_LPJ_T0074328.1 MGP_LPJ_G0030011.1 mouse_genomes_project 5 129651344 129697971 - MGP_LPJ_P0074328 Scarb1 protein_coding protein_coding MGP_LPJ_T0074329.1 MGP_LPJ_G0030011.1 mouse_genomes_project 5 129657591 129679665 - Scarb1 protein_coding processed_transcript MGP_LPJ_T0074330.1 MGP_LPJ_G0030011.1 mouse_genomes_project 5 129678658 129681126 - Scarb1 protein_coding retained_intron MGP_LPJ_T0071504.1 MGP_LPJ_G0029454.1 mouse_genomes_project 5 52983906 53170718 + MGP_LPJ_P0071504 protein_coding protein_coding MGP_LPJ_T0071505.1 MGP_LPJ_G0029454.1 mouse_genomes_project 5 53080385 53081904 + protein_coding retained_intron MGP_LPJ_T0071506.1 MGP_LPJ_G0029454.1 mouse_genomes_project 5 53114182 53174735 + MGP_LPJ_P0071506 protein_coding unknown_likely_coding MGP_LPJ_T0071507.1 MGP_LPJ_G0029454.1 mouse_genomes_project 5 53142698 53167295 + protein_coding processed_transcript MGP_LPJ_T0071508.1 MGP_LPJ_G0029454.1 mouse_genomes_project 5 53148176 53163384 + protein_coding processed_transcript MGP_LPJ_T0071509.1 MGP_LPJ_G0029454.1 mouse_genomes_project 5 53148339 53163384 + protein_coding processed_transcript MGP_LPJ_T0071510.1 MGP_LPJ_G0029454.1 mouse_genomes_project 5 53159907 53163386 + protein_coding retained_intron MGP_LPJ_T0071511.1 MGP_LPJ_G0029454.1 mouse_genomes_project 5 53167053 53172787 + protein_coding retained_intron MGP_LPJ_T0001471.1 MGP_LPJ_G0001388.1 mouse_genomes_project 5 5760476 5764091 + TEC TEC MGP_LPJ_T0071419.1 MGP_LPJ_G0029439.1 mouse_genomes_project 5 47594924 47647739 + 5730480H06Rik protein_coding processed_transcript MGP_LPJ_T0071420.1 MGP_LPJ_G0029439.1 mouse_genomes_project 5 47639861 47656379 + MGP_LPJ_P0071420 5730480H06Rik protein_coding protein_coding MGP_LPJ_T0071421.1 MGP_LPJ_G0029439.1 mouse_genomes_project 5 47639861 47656379 + MGP_LPJ_P0071421 5730480H06Rik protein_coding protein_coding MGP_LPJ_T0071422.1 MGP_LPJ_G0029439.1 mouse_genomes_project 5 47639965 47656380 + MGP_LPJ_P0071422 5730480H06Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0071423.1 MGP_LPJ_G0029439.1 mouse_genomes_project 5 47641967 47663151 + MGP_LPJ_P0071423 5730480H06Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0071424.1 MGP_LPJ_G0029439.1 mouse_genomes_project 5 47647652 47656090 + 5730480H06Rik protein_coding retained_intron MGP_LPJ_T0071432.1 MGP_LPJ_G0029439.1 mouse_genomes_project 5 47660370 47665775 + 5730480H06Rik protein_coding retained_intron MGP_LPJ_T0071433.1 MGP_LPJ_G0029439.1 mouse_genomes_project 5 47663110 47682286 + 5730480H06Rik protein_coding retained_intron MGP_LPJ_T0071435.1 MGP_LPJ_G0029439.1 mouse_genomes_project 5 47664197 47682315 + 5730480H06Rik protein_coding processed_transcript MGP_LPJ_T0004688.1 MGP_LPJ_G0004060.1 mouse_genomes_project 5 32853326 32858138 + Gm42848 antisense antisense MGP_LPJ_T0069906.1 MGP_LPJ_G0029185.1 mouse_genomes_project 5 5134186 5157730 + MGP_LPJ_P0069906 Sri protein_coding protein_coding MGP_LPJ_T0069907.1 MGP_LPJ_G0029185.1 mouse_genomes_project 5 5144627 5157502 + MGP_LPJ_P0069907 Sri protein_coding protein_coding MGP_LPJ_T0069908.1 MGP_LPJ_G0029185.1 mouse_genomes_project 5 5144658 5145956 + Sri protein_coding retained_intron MGP_LPJ_T0069909.1 MGP_LPJ_G0029185.1 mouse_genomes_project 5 5144662 5147822 + Sri protein_coding retained_intron MGP_LPJ_T0069910.1 MGP_LPJ_G0029185.1 mouse_genomes_project 5 5144708 5153414 + Sri protein_coding retained_intron MGP_LPJ_T0069911.1 MGP_LPJ_G0029185.1 mouse_genomes_project 5 5147442 5156091 + Sri protein_coding retained_intron MGP_LPJ_T0069912.1 MGP_LPJ_G0029185.1 mouse_genomes_project 5 5150071 5151277 + Sri protein_coding retained_intron MGP_LPJ_T0008339.1 MGP_LPJ_G0006778.1 mouse_genomes_project 5 119904377 119906500 - 4930562A09Rik lincRNA lincRNA MGP_LPJ_T0075660.1 MGP_LPJ_G0030276.1 mouse_genomes_project 5 152129223 152222862 - MGP_LPJ_P0075660 protein_coding nonsense_mediated_decay MGP_LPJ_T0075661.1 MGP_LPJ_G0030276.1 mouse_genomes_project 5 152129225 152222852 - MGP_LPJ_P0075661 protein_coding protein_coding MGP_LPJ_T0001607.1 MGP_LPJ_G0001521.1 mouse_genomes_project 5 48511912 48514398 - TEC TEC MGP_LPJ_T0014966.1 MGP_LPJ_G0013057.1 mouse_genomes_project 5 66577619 66577887 + processed_pseudogene processed_pseudogene MGP_LPJ_T0070885.1 MGP_LPJ_G0029353.1 mouse_genomes_project 5 32358010 32401759 - MGP_LPJ_P0070885 Letm1 protein_coding protein_coding MGP_LPJ_T0070886.1 MGP_LPJ_G0029353.1 mouse_genomes_project 5 32360871 32372370 - Letm1 protein_coding retained_intron MGP_LPJ_T0070887.1 MGP_LPJ_G0029353.1 mouse_genomes_project 5 32380608 32397586 - MGP_LPJ_P0070887 Letm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0070888.1 MGP_LPJ_G0029353.1 mouse_genomes_project 5 32388300 32401656 - Letm1 protein_coding processed_transcript MGP_LPJ_T0070889.1 MGP_LPJ_G0029353.1 mouse_genomes_project 5 32388499 32389392 - Letm1 protein_coding processed_transcript MGP_LPJ_T0070890.1 MGP_LPJ_G0029353.1 mouse_genomes_project 5 32395396 32401679 - MGP_LPJ_P0070890 Letm1 protein_coding protein_coding MGP_LPJ_T0008183.1 MGP_LPJ_G0006669.1 mouse_genomes_project 5 75266013 75268952 - Gm15985 lincRNA lincRNA MGP_LPJ_T0073649.1 MGP_LPJ_G0029898.1 mouse_genomes_project 5 122248385 122414417 + Med13l protein_coding retained_intron MGP_LPJ_T0073650.1 MGP_LPJ_G0029898.1 mouse_genomes_project 5 122248425 122461151 + MGP_LPJ_P0073650 Med13l protein_coding protein_coding MGP_LPJ_T0073651.1 MGP_LPJ_G0029898.1 mouse_genomes_project 5 122248445 122459628 + MGP_LPJ_P0073651 Med13l protein_coding protein_coding MGP_LPJ_T0073652.1 MGP_LPJ_G0029898.1 mouse_genomes_project 5 122249289 122282823 + Med13l protein_coding processed_transcript MGP_LPJ_T0073653.1 MGP_LPJ_G0029898.1 mouse_genomes_project 5 122443062 122459628 + Med13l protein_coding retained_intron MGP_LPJ_T0073654.1 MGP_LPJ_G0029898.1 mouse_genomes_project 5 122446070 122459628 + Med13l protein_coding retained_intron MGP_LPJ_T0008337.1 MGP_LPJ_G0006776.1 mouse_genomes_project 5 119802468 119806147 - Gm13838 lincRNA lincRNA MGP_LPJ_T0001776.1 MGP_LPJ_G0001688.1 mouse_genomes_project 5 110319218 110320215 + TEC TEC MGP_LPJ_T0008498.1 MGP_LPJ_G0006889.1 mouse_genomes_project 5 157991471 158054088 - D730045B01Rik lincRNA lincRNA MGP_LPJ_T0008499.1 MGP_LPJ_G0006889.1 mouse_genomes_project 5 157992617 157992926 - D730045B01Rik lincRNA lincRNA MGP_LPJ_T0004904.1 MGP_LPJ_G0004216.1 mouse_genomes_project 5 149256833 149260291 + 0610040B10Rik antisense antisense MGP_LPJ_T0004905.1 MGP_LPJ_G0004216.1 mouse_genomes_project 5 149256894 149258537 + 0610040B10Rik antisense antisense MGP_LPJ_T0004906.1 MGP_LPJ_G0004216.1 mouse_genomes_project 5 149256913 149260288 + 0610040B10Rik antisense antisense MGP_LPJ_T0075652.1 MGP_LPJ_G0030271.1 mouse_genomes_project 5 151296178 151302148 + MGP_LPJ_P0075652 protein_coding protein_coding MGP_LPJ_T0075653.1 MGP_LPJ_G0030271.1 mouse_genomes_project 5 151296227 151306774 + MGP_LPJ_P0075653 protein_coding unknown_likely_coding MGP_LPJ_T0075654.1 MGP_LPJ_G0030271.1 mouse_genomes_project 5 151299037 151306892 + MGP_LPJ_P0075654 protein_coding nonsense_mediated_decay MGP_LPJ_T0072770.1 MGP_LPJ_G0029727.1 mouse_genomes_project 5 108210141 108328021 + MGP_LPJ_P0072770 Lrrc8d protein_coding protein_coding MGP_LPJ_T0072771.1 MGP_LPJ_G0029727.1 mouse_genomes_project 5 108210961 108328016 + MGP_LPJ_P0072771 Lrrc8d protein_coding protein_coding MGP_LPJ_T0072772.1 MGP_LPJ_G0029727.1 mouse_genomes_project 5 108210982 108239242 + Lrrc8d protein_coding retained_intron MGP_LPJ_T0072773.1 MGP_LPJ_G0029727.1 mouse_genomes_project 5 108211038 108239240 + Lrrc8d protein_coding processed_transcript MGP_LPJ_T0072774.1 MGP_LPJ_G0029727.1 mouse_genomes_project 5 108236390 108324643 + MGP_LPJ_P0072774 Lrrc8d protein_coding protein_coding MGP_LPJ_T0072775.1 MGP_LPJ_G0029727.1 mouse_genomes_project 5 108236785 108324654 + MGP_LPJ_P0072775 Lrrc8d protein_coding protein_coding MGP_LPJ_T0072776.1 MGP_LPJ_G0029727.1 mouse_genomes_project 5 108236991 108326445 + Lrrc8d protein_coding processed_transcript MGP_LPJ_T0072777.1 MGP_LPJ_G0029727.1 mouse_genomes_project 5 108237064 108324810 + MGP_LPJ_P0072777 Lrrc8d protein_coding protein_coding MGP_LPJ_T0072778.1 MGP_LPJ_G0029727.1 mouse_genomes_project 5 108237231 108346855 + Lrrc8d protein_coding processed_transcript MGP_LPJ_T0072779.1 MGP_LPJ_G0029727.1 mouse_genomes_project 5 108339087 108346854 + Lrrc8d protein_coding processed_transcript MGP_LPJ_T0075796.1 MGP_LPJ_G0030304.1 mouse_genomes_project 5 155525920 155528700 - MGP_LPJ_P0075796 Hmgb1 protein_coding protein_coding MGP_LPJ_T0075797.1 MGP_LPJ_G0030304.1 mouse_genomes_project 5 155525920 155695908 - MGP_LPJ_P0075797 Hmgb1 protein_coding protein_coding MGP_LPJ_T0075798.1 MGP_LPJ_G0030304.1 mouse_genomes_project 5 155526237 155527532 - Hmgb1 protein_coding retained_intron MGP_LPJ_T0075799.1 MGP_LPJ_G0030304.1 mouse_genomes_project 5 155526485 155529639 - MGP_LPJ_P0075799 Hmgb1 protein_coding protein_coding MGP_LPJ_T0075800.1 MGP_LPJ_G0030304.1 mouse_genomes_project 5 155526908 155527836 - MGP_LPJ_P0075800 Hmgb1 protein_coding protein_coding MGP_LPJ_T0075801.1 MGP_LPJ_G0030304.1 mouse_genomes_project 5 155527152 155529644 - Hmgb1 protein_coding retained_intron MGP_LPJ_T0075802.1 MGP_LPJ_G0030304.1 mouse_genomes_project 5 155527399 155530140 - MGP_LPJ_P0075802 Hmgb1 protein_coding protein_coding MGP_LPJ_T0075803.1 MGP_LPJ_G0030304.1 mouse_genomes_project 5 155527457 155529609 - Hmgb1 protein_coding retained_intron MGP_LPJ_T0070162.1 MGP_LPJ_G0029227.1 mouse_genomes_project 5 20721835 21289751 + MGP_LPJ_P0070162 Lhfpl3 protein_coding protein_coding MGP_LPJ_T0070163.1 MGP_LPJ_G0029227.1 mouse_genomes_project 5 21112996 21289742 + MGP_LPJ_P0070163 Lhfpl3 protein_coding protein_coding MGP_LPJ_T0098266.1 MGP_LPJ_G0036547.1 mouse_genomes_project 5 21719341 21719434 - Gm24009 rRNA rRNA MGP_LPJ_T0070164.1 MGP_LPJ_G0029228.1 mouse_genomes_project 5 21466152 21539244 + MGP_LPJ_P0070164 Kmt2e protein_coding protein_coding MGP_LPJ_T0070165.1 MGP_LPJ_G0029228.1 mouse_genomes_project 5 21466152 21522161 + MGP_LPJ_P0070165 Kmt2e protein_coding nonsense_mediated_decay MGP_LPJ_T0070166.1 MGP_LPJ_G0029228.1 mouse_genomes_project 5 21466160 21539244 + MGP_LPJ_P0070166 Kmt2e protein_coding protein_coding MGP_LPJ_T0070167.1 MGP_LPJ_G0029228.1 mouse_genomes_project 5 21512740 21521212 + Kmt2e protein_coding processed_transcript MGP_LPJ_T0070168.1 MGP_LPJ_G0029228.1 mouse_genomes_project 5 21521261 21531511 + MGP_LPJ_P0070168 Kmt2e protein_coding nonsense_mediated_decay MGP_LPJ_T0070169.1 MGP_LPJ_G0029228.1 mouse_genomes_project 5 21521309 21537874 + MGP_LPJ_P0070169 Kmt2e protein_coding protein_coding MGP_LPJ_T0070170.1 MGP_LPJ_G0029228.1 mouse_genomes_project 5 21528181 21535783 + MGP_LPJ_P0070170 Kmt2e protein_coding nonsense_mediated_decay MGP_LPJ_T0070171.1 MGP_LPJ_G0029228.1 mouse_genomes_project 5 21528718 21531661 + Kmt2e protein_coding retained_intron MGP_LPJ_T0070172.1 MGP_LPJ_G0029228.1 mouse_genomes_project 5 21533574 21535826 + MGP_LPJ_P0070172 Kmt2e protein_coding nonsense_mediated_decay MGP_LPJ_T0075400.1 MGP_LPJ_G0030218.1 mouse_genomes_project 5 148493803 148496598 + Wipi2 protein_coding retained_intron MGP_LPJ_T0075401.1 MGP_LPJ_G0030218.1 mouse_genomes_project 5 148495649 148545972 + MGP_LPJ_P0075401 Wipi2 protein_coding protein_coding MGP_LPJ_T0075402.1 MGP_LPJ_G0030218.1 mouse_genomes_project 5 148495698 148538093 + Wipi2 protein_coding retained_intron MGP_LPJ_T0075403.1 MGP_LPJ_G0030218.1 mouse_genomes_project 5 148495700 148542871 + MGP_LPJ_P0075403 Wipi2 protein_coding protein_coding MGP_LPJ_T0075404.1 MGP_LPJ_G0030218.1 mouse_genomes_project 5 148537897 148540028 + Wipi2 protein_coding retained_intron MGP_LPJ_T0001559.1 MGP_LPJ_G0001473.1 mouse_genomes_project 5 43051696 43052238 - TEC TEC MGP_LPJ_T0008095.1 MGP_LPJ_G0006604.1 mouse_genomes_project 5 28513179 28522165 + lincRNA lincRNA MGP_LPJ_T0008321.1 MGP_LPJ_G0006766.1 mouse_genomes_project 5 116346044 116356582 + Gm43095 lincRNA lincRNA MGP_LPJ_T0099632.1 MGP_LPJ_G0037895.1 mouse_genomes_project 5 157311569 157311675 + Gm24630 snRNA snRNA MGP_LPJ_T0008294.1 MGP_LPJ_G0006752.1 mouse_genomes_project 5 114665394 114671919 + C130026L21Rik lincRNA lincRNA MGP_LPJ_T0008295.1 MGP_LPJ_G0006752.1 mouse_genomes_project 5 114665533 114671127 + C130026L21Rik lincRNA lincRNA MGP_LPJ_T0008296.1 MGP_LPJ_G0006752.1 mouse_genomes_project 5 114665540 114666849 + C130026L21Rik lincRNA lincRNA MGP_LPJ_T0008297.1 MGP_LPJ_G0006752.1 mouse_genomes_project 5 114666403 114690663 + C130026L21Rik lincRNA lincRNA MGP_LPJ_T0072540.1 MGP_LPJ_G0029669.1 mouse_genomes_project 5 99013750 99043927 - MGP_LPJ_P0072540 Paqr3 protein_coding protein_coding MGP_LPJ_T0072541.1 MGP_LPJ_G0029669.1 mouse_genomes_project 5 99018474 99043905 - MGP_LPJ_P0072541 Paqr3 protein_coding protein_coding MGP_LPJ_T0072542.1 MGP_LPJ_G0029669.1 mouse_genomes_project 5 99028216 99030054 - Paqr3 protein_coding retained_intron MGP_LPJ_T0072543.1 MGP_LPJ_G0029669.1 mouse_genomes_project 5 99029806 99043776 - MGP_LPJ_P0072543 Paqr3 protein_coding protein_coding MGP_LPJ_T0072544.1 MGP_LPJ_G0029669.1 mouse_genomes_project 5 99034503 99043927 - MGP_LPJ_P0072544 Paqr3 protein_coding protein_coding MGP_LPJ_T0072545.1 MGP_LPJ_G0029669.1 mouse_genomes_project 5 99036942 99043915 - Paqr3 protein_coding retained_intron MGP_LPJ_T0014907.1 MGP_LPJ_G0012998.1 mouse_genomes_project 5 40361226 40362035 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014950.1 MGP_LPJ_G0013041.1 mouse_genomes_project 5 60703218 60703987 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008456.1 MGP_LPJ_G0006859.1 mouse_genomes_project 5 153779755 153784837 + D5Ertd605e lincRNA lincRNA MGP_LPJ_T0075516.1 MGP_LPJ_G0030242.1 mouse_genomes_project 5 149806711 149813853 - MGP_LPJ_P0075516 Aimp2 protein_coding protein_coding MGP_LPJ_T0075517.1 MGP_LPJ_G0030242.1 mouse_genomes_project 5 149806711 149813845 - MGP_LPJ_P0075517 Aimp2 protein_coding protein_coding MGP_LPJ_T0075518.1 MGP_LPJ_G0030242.1 mouse_genomes_project 5 149810095 149813790 - Aimp2 protein_coding retained_intron MGP_LPJ_T0075519.1 MGP_LPJ_G0030242.1 mouse_genomes_project 5 149810380 149813794 - Aimp2 protein_coding retained_intron MGP_LPJ_T0072925.1 MGP_LPJ_G0029754.1 mouse_genomes_project 5 111080239 111125464 + MGP_LPJ_P0072925 Pde6b protein_coding protein_coding MGP_LPJ_T0072926.1 MGP_LPJ_G0029754.1 mouse_genomes_project 5 111080274 111125388 + Pde6b protein_coding retained_intron MGP_LPJ_T0072927.1 MGP_LPJ_G0029754.1 mouse_genomes_project 5 111124097 111126118 + Pde6b protein_coding retained_intron MGP_LPJ_T0008478.1 MGP_LPJ_G0006877.1 mouse_genomes_project 5 155874707 155903128 + BC028471 lincRNA lincRNA MGP_LPJ_T0008479.1 MGP_LPJ_G0006877.1 mouse_genomes_project 5 155876121 155885326 + BC028471 lincRNA lincRNA MGP_LPJ_T0008480.1 MGP_LPJ_G0006877.1 mouse_genomes_project 5 155876123 155894672 + BC028471 lincRNA lincRNA MGP_LPJ_T0008481.1 MGP_LPJ_G0006877.1 mouse_genomes_project 5 155876338 155902018 + BC028471 lincRNA lincRNA MGP_LPJ_T0008482.1 MGP_LPJ_G0006877.1 mouse_genomes_project 5 155885291 155903128 + BC028471 lincRNA lincRNA MGP_LPJ_T0008483.1 MGP_LPJ_G0006877.1 mouse_genomes_project 5 155885303 155886125 + BC028471 lincRNA lincRNA MGP_LPJ_T0001708.1 MGP_LPJ_G0001621.1 mouse_genomes_project 5 72971657 72974366 - TEC TEC MGP_LPJ_T0010706.1 MGP_LPJ_G0008824.1 mouse_genomes_project 5 67318412 67318526 - Gm23841 miRNA miRNA MGP_LPJ_T0075244.1 MGP_LPJ_G0030181.1 mouse_genomes_project 5 144830667 144848389 + MGP_LPJ_P0075244 Get4 protein_coding protein_coding MGP_LPJ_T0075245.1 MGP_LPJ_G0030181.1 mouse_genomes_project 5 144830713 144845479 + MGP_LPJ_P0075245 Get4 protein_coding protein_coding MGP_LPJ_T0075246.1 MGP_LPJ_G0030181.1 mouse_genomes_project 5 144831840 144845572 + MGP_LPJ_P0075246 Get4 protein_coding protein_coding MGP_LPJ_T0075247.1 MGP_LPJ_G0030181.1 mouse_genomes_project 5 144831854 144847667 + MGP_LPJ_P0075247 Get4 protein_coding protein_coding MGP_LPJ_T0075248.1 MGP_LPJ_G0030181.1 mouse_genomes_project 5 144845204 144845776 + Get4 protein_coding retained_intron MGP_LPJ_T0075249.1 MGP_LPJ_G0030181.1 mouse_genomes_project 5 144845268 144848040 + Get4 protein_coding retained_intron MGP_LPJ_T0008464.1 MGP_LPJ_G0006867.1 mouse_genomes_project 5 155419106 155420517 + 8430423G03Rik lincRNA lincRNA MGP_LPJ_T0015150.1 MGP_LPJ_G0013241.1 mouse_genomes_project 5 151732396 151732558 + processed_pseudogene processed_pseudogene MGP_LPJ_T0075564.1 MGP_LPJ_G0030253.1 mouse_genomes_project 5 150500059 150511658 + MGP_LPJ_P0075564 Nptx2 protein_coding protein_coding MGP_LPJ_T0074837.1 MGP_LPJ_G0030105.1 mouse_genomes_project 5 141174575 141188101 - MGP_LPJ_P0074837 Lrwd1 protein_coding protein_coding MGP_LPJ_T0074838.1 MGP_LPJ_G0030105.1 mouse_genomes_project 5 141174870 141188028 - Lrwd1 protein_coding retained_intron MGP_LPJ_T0074839.1 MGP_LPJ_G0030105.1 mouse_genomes_project 5 141174878 141177363 - Lrwd1 protein_coding retained_intron MGP_LPJ_T0074840.1 MGP_LPJ_G0030105.1 mouse_genomes_project 5 141175495 141182169 - MGP_LPJ_P0074840 Lrwd1 protein_coding protein_coding MGP_LPJ_T0074841.1 MGP_LPJ_G0030105.1 mouse_genomes_project 5 141181204 141188049 - Lrwd1 protein_coding retained_intron MGP_LPJ_T0074842.1 MGP_LPJ_G0030105.1 mouse_genomes_project 5 141182599 141188029 - Lrwd1 protein_coding retained_intron MGP_LPJ_T0074843.1 MGP_LPJ_G0030105.1 mouse_genomes_project 5 141183671 141188089 - Lrwd1 protein_coding retained_intron MGP_LPJ_T0074844.1 MGP_LPJ_G0030105.1 mouse_genomes_project 5 141184303 141185874 - Lrwd1 protein_coding retained_intron MGP_LPJ_T0074845.1 MGP_LPJ_G0030105.1 mouse_genomes_project 5 141185028 141188024 - MGP_LPJ_P0074845 Lrwd1 protein_coding protein_coding MGP_LPJ_T0001757.1 MGP_LPJ_G0001669.1 mouse_genomes_project 5 102922050 102924347 + TEC TEC MGP_LPJ_T0015149.1 MGP_LPJ_G0013240.1 mouse_genomes_project 5 151708373 151708538 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001845.1 MGP_LPJ_G0001757.1 mouse_genomes_project 5 127667618 127669604 + TEC TEC MGP_LPJ_T0102186.1 MGP_LPJ_G0040223.1 mouse_genomes_project 5 88747870 88749525 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0014960.1 MGP_LPJ_G0013051.1 mouse_genomes_project 5 64226340 64227211 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100843.1 MGP_LPJ_G0039106.1 mouse_genomes_project 5 84838710 84838838 - Gm24792 snoRNA snoRNA MGP_LPJ_T0070486.1 MGP_LPJ_G0029294.1 mouse_genomes_project 5 29077282 29084784 + MGP_LPJ_P0070486 Cenpa protein_coding protein_coding MGP_LPJ_T0070487.1 MGP_LPJ_G0029294.1 mouse_genomes_project 5 29077402 29084332 + MGP_LPJ_P0070487 Cenpa protein_coding nonsense_mediated_decay MGP_LPJ_T0070488.1 MGP_LPJ_G0029294.1 mouse_genomes_project 5 29077417 29084269 + MGP_LPJ_P0070488 Cenpa protein_coding nonsense_mediated_decay MGP_LPJ_T0070489.1 MGP_LPJ_G0029294.1 mouse_genomes_project 5 29077440 29084363 + Cenpa protein_coding retained_intron MGP_LPJ_T0070490.1 MGP_LPJ_G0029294.1 mouse_genomes_project 5 29077448 29079761 + MGP_LPJ_P0070490 Cenpa protein_coding protein_coding MGP_LPJ_T0070491.1 MGP_LPJ_G0029294.1 mouse_genomes_project 5 29077462 29084018 + MGP_LPJ_P0070491 Cenpa protein_coding protein_coding MGP_LPJ_T0070492.1 MGP_LPJ_G0029294.1 mouse_genomes_project 5 29077465 29080716 + Cenpa protein_coding retained_intron MGP_LPJ_T0070493.1 MGP_LPJ_G0029294.1 mouse_genomes_project 5 29077479 29084363 + MGP_LPJ_P0070493 Cenpa protein_coding nonsense_mediated_decay MGP_LPJ_T0070494.1 MGP_LPJ_G0029294.1 mouse_genomes_project 5 29077503 29084340 + MGP_LPJ_P0070494 Cenpa protein_coding nonsense_mediated_decay MGP_LPJ_T0070495.1 MGP_LPJ_G0029294.1 mouse_genomes_project 5 29079823 29084362 + MGP_LPJ_P0070495 Cenpa protein_coding unknown_likely_coding MGP_LPJ_T0070496.1 MGP_LPJ_G0029294.1 mouse_genomes_project 5 29081905 29084156 + Cenpa protein_coding retained_intron MGP_LPJ_T0071592.1 MGP_LPJ_G0029473.1 mouse_genomes_project 5 65310877 65379622 + MGP_LPJ_P0071592 Wdr19 protein_coding protein_coding MGP_LPJ_T0071593.1 MGP_LPJ_G0029473.1 mouse_genomes_project 5 65310879 65379631 + MGP_LPJ_P0071593 Wdr19 protein_coding protein_coding MGP_LPJ_T0071594.1 MGP_LPJ_G0029473.1 mouse_genomes_project 5 65310881 65316496 + Wdr19 protein_coding retained_intron MGP_LPJ_T0071595.1 MGP_LPJ_G0029473.1 mouse_genomes_project 5 65310898 65362893 + Wdr19 protein_coding retained_intron MGP_LPJ_T0071596.1 MGP_LPJ_G0029473.1 mouse_genomes_project 5 65310912 65344168 + Wdr19 protein_coding retained_intron MGP_LPJ_T0071597.1 MGP_LPJ_G0029473.1 mouse_genomes_project 5 65310921 65337457 + Wdr19 protein_coding retained_intron MGP_LPJ_T0071598.1 MGP_LPJ_G0029473.1 mouse_genomes_project 5 65313796 65379626 + Wdr19 protein_coding retained_intron MGP_LPJ_T0071599.1 MGP_LPJ_G0029473.1 mouse_genomes_project 5 65375640 65379625 + MGP_LPJ_P0071599 Wdr19 protein_coding protein_coding MGP_LPJ_T0001645.1 MGP_LPJ_G0001559.1 mouse_genomes_project 5 57874490 57876380 - TEC TEC MGP_LPJ_T0015061.1 MGP_LPJ_G0013152.1 mouse_genomes_project 5 110483305 110483647 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008267.1 MGP_LPJ_G0006734.1 mouse_genomes_project 5 108888861 108901661 + Gm42914 lincRNA lincRNA MGP_LPJ_T0008143.1 MGP_LPJ_G0006637.1 mouse_genomes_project 5 49481786 49486429 + 4930448I18Rik lincRNA lincRNA MGP_LPJ_T0001663.1 MGP_LPJ_G0001576.1 mouse_genomes_project 5 65697997 65699743 + TEC TEC MGP_LPJ_T0100829.1 MGP_LPJ_G0039092.1 mouse_genomes_project 5 56757428 56757551 + Gm24902 snoRNA snoRNA MGP_LPJ_T0015113.1 MGP_LPJ_G0013204.1 mouse_genomes_project 5 139944334 139944506 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015003.1 MGP_LPJ_G0013094.1 mouse_genomes_project 5 88253007 88254600 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008063.1 MGP_LPJ_G0006585.1 mouse_genomes_project 5 16354062 16362812 - Gm43030 lincRNA lincRNA MGP_LPJ_T0001496.1 MGP_LPJ_G0001413.1 mouse_genomes_project 5 14405055 14406541 + TEC TEC MGP_LPJ_T0010704.1 MGP_LPJ_G0008822.1 mouse_genomes_project 5 65069593 65069671 + Mir574 miRNA miRNA MGP_LPJ_T0099580.1 MGP_LPJ_G0037843.1 mouse_genomes_project 5 70236790 70236878 + Gm23661 snRNA snRNA MGP_LPJ_T0001504.1 MGP_LPJ_G0001421.1 mouse_genomes_project 5 21861899 21862790 + TEC TEC MGP_LPJ_T0070273.1 MGP_LPJ_G0029245.1 mouse_genomes_project 5 22585617 22638356 + MGP_LPJ_P0070273 Agap3 protein_coding protein_coding MGP_LPJ_T0070274.1 MGP_LPJ_G0029245.1 mouse_genomes_project 5 22585647 22618288 + MGP_LPJ_P0070274 Agap3 protein_coding unknown_likely_coding MGP_LPJ_T0070275.1 MGP_LPJ_G0029245.1 mouse_genomes_project 5 22585774 22617424 + Agap3 protein_coding processed_transcript MGP_LPJ_T0070276.1 MGP_LPJ_G0029245.1 mouse_genomes_project 5 22607379 22618280 + MGP_LPJ_P0070276 Agap3 protein_coding protein_coding MGP_LPJ_T0070277.1 MGP_LPJ_G0029245.1 mouse_genomes_project 5 22614381 22638346 + MGP_LPJ_P0070277 Agap3 protein_coding protein_coding MGP_LPJ_T0070278.1 MGP_LPJ_G0029245.1 mouse_genomes_project 5 22614800 22618278 + Agap3 protein_coding processed_transcript MGP_LPJ_T0072376.1 MGP_LPJ_G0029636.1 mouse_genomes_project 5 92545925 92564125 + MGP_LPJ_P0072376 Ereg protein_coding protein_coding MGP_LPJ_T0001695.1 MGP_LPJ_G0001608.1 mouse_genomes_project 5 68126730 68128027 - TEC TEC MGP_LPJ_T0101554.1 MGP_LPJ_G0039659.1 mouse_genomes_project 5 31067292 31074041 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101555.1 MGP_LPJ_G0039659.1 mouse_genomes_project 5 31067296 31074097 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0001705.1 MGP_LPJ_G0001618.1 mouse_genomes_project 5 69623088 69627449 - TEC TEC MGP_LPJ_T0014875.1 MGP_LPJ_G0012966.1 mouse_genomes_project 5 28102671 28103050 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004700.1 MGP_LPJ_G0004071.1 mouse_genomes_project 5 42208694 42292840 - Gm7854 antisense antisense MGP_LPJ_T0004701.1 MGP_LPJ_G0004071.1 mouse_genomes_project 5 42208694 42293210 - Gm7854 antisense antisense MGP_LPJ_T0004702.1 MGP_LPJ_G0004071.1 mouse_genomes_project 5 42292856 42293207 - Gm7854 antisense antisense MGP_LPJ_T0074274.1 MGP_LPJ_G0030004.1 mouse_genomes_project 5 128945902 128964063 + MGP_LPJ_P0074274 Gtf2h3 protein_coding protein_coding MGP_LPJ_T0074275.1 MGP_LPJ_G0030004.1 mouse_genomes_project 5 128945904 128948444 + Gtf2h3 protein_coding retained_intron MGP_LPJ_T0074276.1 MGP_LPJ_G0030004.1 mouse_genomes_project 5 128945928 128958884 + Gtf2h3 protein_coding retained_intron MGP_LPJ_T0074277.1 MGP_LPJ_G0030004.1 mouse_genomes_project 5 128950625 128961835 + Gtf2h3 protein_coding retained_intron MGP_LPJ_T0074278.1 MGP_LPJ_G0030004.1 mouse_genomes_project 5 128956635 128962820 + Gtf2h3 protein_coding retained_intron MGP_LPJ_T0074279.1 MGP_LPJ_G0030004.1 mouse_genomes_project 5 128960526 128961844 + Gtf2h3 protein_coding retained_intron MGP_LPJ_T0004740.1 MGP_LPJ_G0004102.1 mouse_genomes_project 5 74493390 74509839 + Usp46os1 antisense antisense MGP_LPJ_T0074935.1 MGP_LPJ_G0030123.1 mouse_genomes_project 5 142423351 142427004 - MGP_LPJ_P0074935 protein_coding protein_coding MGP_LPJ_T0074936.1 MGP_LPJ_G0030123.1 mouse_genomes_project 5 142424578 142432898 - MGP_LPJ_P0074936 protein_coding protein_coding MGP_LPJ_T0073954.1 MGP_LPJ_G0029957.1 mouse_genomes_project 5 126825842 126865799 + MGP_LPJ_P0073954 P2rx7 protein_coding protein_coding MGP_LPJ_T0073955.1 MGP_LPJ_G0029957.1 mouse_genomes_project 5 126825842 126865791 + MGP_LPJ_P0073955 P2rx7 protein_coding protein_coding MGP_LPJ_T0073956.1 MGP_LPJ_G0029957.1 mouse_genomes_project 5 126825870 126872975 + MGP_LPJ_P0073956 P2rx7 protein_coding protein_coding MGP_LPJ_T0073957.1 MGP_LPJ_G0029957.1 mouse_genomes_project 5 126825940 126837042 + MGP_LPJ_P0073957 P2rx7 protein_coding protein_coding MGP_LPJ_T0073958.1 MGP_LPJ_G0029957.1 mouse_genomes_project 5 126826096 126829724 + P2rx7 protein_coding processed_transcript MGP_LPJ_T0073959.1 MGP_LPJ_G0029957.1 mouse_genomes_project 5 126832181 126862882 + P2rx7 protein_coding processed_transcript MGP_LPJ_T0073960.1 MGP_LPJ_G0029957.1 mouse_genomes_project 5 126863450 126865048 + P2rx7 protein_coding processed_transcript MGP_LPJ_T0073961.1 MGP_LPJ_G0029957.1 mouse_genomes_project 5 126863690 126865786 + P2rx7 protein_coding retained_intron MGP_LPJ_T0075698.1 MGP_LPJ_G0030285.1 mouse_genomes_project 5 153150135 153152792 + MGP_LPJ_P0075698 Rasl11a protein_coding protein_coding MGP_LPJ_T0075699.1 MGP_LPJ_G0030285.1 mouse_genomes_project 5 153150829 153152447 + Rasl11a protein_coding retained_intron MGP_LPJ_T0073752.1 MGP_LPJ_G0029925.1 mouse_genomes_project 5 125187059 125194283 + MGP_LPJ_P0073752 protein_coding protein_coding MGP_LPJ_T0073753.1 MGP_LPJ_G0029925.1 mouse_genomes_project 5 125187124 125187838 + protein_coding retained_intron MGP_LPJ_T0073754.1 MGP_LPJ_G0029925.1 mouse_genomes_project 5 125191271 125192018 + protein_coding retained_intron MGP_LPJ_T0073755.1 MGP_LPJ_G0029925.1 mouse_genomes_project 5 125191357 125194007 + MGP_LPJ_P0073755 protein_coding nonsense_mediated_decay MGP_LPJ_T0073756.1 MGP_LPJ_G0029925.1 mouse_genomes_project 5 125191710 125193597 + protein_coding retained_intron MGP_LPJ_T0073757.1 MGP_LPJ_G0029925.1 mouse_genomes_project 5 125192829 125194008 + protein_coding retained_intron MGP_LPJ_T0014823.1 MGP_LPJ_G0012914.1 mouse_genomes_project 5 15294624 15295687 + processed_pseudogene processed_pseudogene MGP_LPJ_T0069899.1 MGP_LPJ_G0029182.1 mouse_genomes_project 5 2816204 2821591 + MGP_LPJ_P0069899 protein_coding protein_coding MGP_LPJ_T0004689.1 MGP_LPJ_G0004061.1 mouse_genomes_project 5 33317502 33319262 + Gm15522 antisense antisense MGP_LPJ_T0071318.1 MGP_LPJ_G0029425.1 mouse_genomes_project 5 42918124 42926499 + MGP_LPJ_P0071318 Bst1 protein_coding nonsense_mediated_decay MGP_LPJ_T0071319.1 MGP_LPJ_G0029425.1 mouse_genomes_project 5 42918130 42937117 + MGP_LPJ_P0071319 Bst1 protein_coding protein_coding MGP_LPJ_T0071320.1 MGP_LPJ_G0029425.1 mouse_genomes_project 5 42921730 42936597 + Bst1 protein_coding retained_intron MGP_LPJ_T0071321.1 MGP_LPJ_G0029425.1 mouse_genomes_project 5 42930244 42935541 + Bst1 protein_coding retained_intron MGP_LPJ_T0098617.1 MGP_LPJ_G0036891.1 mouse_genomes_project 5 28756815 28757260 + Gm43755 sense_intronic sense_intronic MGP_LPJ_T0075657.1 MGP_LPJ_G0030273.1 mouse_genomes_project 5 151510311 151550177 - MGP_LPJ_P0075657 protein_coding protein_coding MGP_LPJ_T0001685.1 MGP_LPJ_G0001598.1 mouse_genomes_project 5 66931057 66933575 + TEC TEC MGP_LPJ_T0073685.1 MGP_LPJ_G0029906.1 mouse_genomes_project 5 124337461 124363024 + MGP_LPJ_P0073685 Slc8b1 protein_coding protein_coding MGP_LPJ_T0073686.1 MGP_LPJ_G0029906.1 mouse_genomes_project 5 124337528 124363019 + MGP_LPJ_P0073686 Slc8b1 protein_coding protein_coding MGP_LPJ_T0073687.1 MGP_LPJ_G0029906.1 mouse_genomes_project 5 124337545 124363020 + MGP_LPJ_P0073687 Slc8b1 protein_coding protein_coding MGP_LPJ_T0073688.1 MGP_LPJ_G0029906.1 mouse_genomes_project 5 124337550 124362573 + MGP_LPJ_P0073688 Slc8b1 protein_coding unknown_likely_coding MGP_LPJ_T0073689.1 MGP_LPJ_G0029906.1 mouse_genomes_project 5 124337563 124339482 + MGP_LPJ_P0073689 Slc8b1 protein_coding protein_coding MGP_LPJ_T0073690.1 MGP_LPJ_G0029906.1 mouse_genomes_project 5 124339161 124346042 + MGP_LPJ_P0073690 Slc8b1 protein_coding protein_coding MGP_LPJ_T0073691.1 MGP_LPJ_G0029906.1 mouse_genomes_project 5 124339436 124362057 + MGP_LPJ_P0073691 Slc8b1 protein_coding protein_coding MGP_LPJ_T0073692.1 MGP_LPJ_G0029906.1 mouse_genomes_project 5 124347069 124348511 + Slc8b1 protein_coding retained_intron MGP_LPJ_T0010732.1 MGP_LPJ_G0008850.1 mouse_genomes_project 5 125929829 125929894 - Mir7031 miRNA miRNA MGP_LPJ_T0073478.1 MGP_LPJ_G0029868.1 mouse_genomes_project 5 118766487 118768824 + MGP_LPJ_P0073478 Triap1 protein_coding protein_coding MGP_LPJ_T0001739.1 MGP_LPJ_G0001651.1 mouse_genomes_project 5 92275801 92278933 + TEC TEC MGP_LPJ_T0008198.1 MGP_LPJ_G0006682.1 mouse_genomes_project 5 77797637 77799419 - Gm42757 lincRNA lincRNA MGP_LPJ_T0075250.1 MGP_LPJ_G0030182.1 mouse_genomes_project 5 144850213 144887289 - Adap1 protein_coding processed_transcript MGP_LPJ_T0075251.1 MGP_LPJ_G0030182.1 mouse_genomes_project 5 144850213 144906535 - MGP_LPJ_P0075251 Adap1 protein_coding protein_coding MGP_LPJ_T0075252.1 MGP_LPJ_G0030182.1 mouse_genomes_project 5 144851113 144884118 - Adap1 protein_coding processed_transcript MGP_LPJ_T0075253.1 MGP_LPJ_G0030182.1 mouse_genomes_project 5 144851195 144887261 - Adap1 protein_coding processed_transcript MGP_LPJ_T0075254.1 MGP_LPJ_G0030182.1 mouse_genomes_project 5 144851267 144852979 - Adap1 protein_coding retained_intron MGP_LPJ_T0075255.1 MGP_LPJ_G0030182.1 mouse_genomes_project 5 144860666 144888671 - Adap1 protein_coding retained_intron MGP_LPJ_T0071123.1 MGP_LPJ_G0029391.1 mouse_genomes_project 5 35277607 35370556 - MGP_LPJ_P0071123 Tbc1d14 protein_coding protein_coding MGP_LPJ_T0071124.1 MGP_LPJ_G0029391.1 mouse_genomes_project 5 35277607 35378628 - MGP_LPJ_P0071124 Tbc1d14 protein_coding protein_coding MGP_LPJ_T0071125.1 MGP_LPJ_G0029391.1 mouse_genomes_project 5 35277607 35378034 - MGP_LPJ_P0071125 Tbc1d14 protein_coding protein_coding MGP_LPJ_T0071126.1 MGP_LPJ_G0029391.1 mouse_genomes_project 5 35277608 35323386 - MGP_LPJ_P0071126 Tbc1d14 protein_coding protein_coding MGP_LPJ_T0071127.1 MGP_LPJ_G0029391.1 mouse_genomes_project 5 35277611 35378023 - MGP_LPJ_P0071127 Tbc1d14 protein_coding protein_coding MGP_LPJ_T0071128.1 MGP_LPJ_G0029391.1 mouse_genomes_project 5 35277611 35324365 - MGP_LPJ_P0071128 Tbc1d14 protein_coding protein_coding MGP_LPJ_T0071129.1 MGP_LPJ_G0029391.1 mouse_genomes_project 5 35279624 35299208 - MGP_LPJ_P0071129 Tbc1d14 protein_coding nonsense_mediated_decay MGP_LPJ_T0071130.1 MGP_LPJ_G0029391.1 mouse_genomes_project 5 35279742 35382496 - MGP_LPJ_P0071130 Tbc1d14 protein_coding protein_coding MGP_LPJ_T0071131.1 MGP_LPJ_G0029391.1 mouse_genomes_project 5 35279744 35382488 - MGP_LPJ_P0071131 Tbc1d14 protein_coding protein_coding MGP_LPJ_T0071132.1 MGP_LPJ_G0029391.1 mouse_genomes_project 5 35279749 35280421 - Tbc1d14 protein_coding processed_transcript MGP_LPJ_T0071133.1 MGP_LPJ_G0029391.1 mouse_genomes_project 5 35279949 35367776 - MGP_LPJ_P0071133 Tbc1d14 protein_coding protein_coding MGP_LPJ_T0071134.1 MGP_LPJ_G0029391.1 mouse_genomes_project 5 35280017 35323311 - MGP_LPJ_P0071134 Tbc1d14 protein_coding nonsense_mediated_decay MGP_LPJ_T0071135.1 MGP_LPJ_G0029391.1 mouse_genomes_project 5 35282168 35312033 - Tbc1d14 protein_coding retained_intron MGP_LPJ_T0071136.1 MGP_LPJ_G0029391.1 mouse_genomes_project 5 35310843 35323282 - MGP_LPJ_P0071136 Tbc1d14 protein_coding nonsense_mediated_decay MGP_LPJ_T0071137.1 MGP_LPJ_G0029391.1 mouse_genomes_project 5 35316486 35323270 - Tbc1d14 protein_coding processed_transcript MGP_LPJ_T0071138.1 MGP_LPJ_G0029391.1 mouse_genomes_project 5 35334037 35378621 - Tbc1d14 protein_coding retained_intron MGP_LPJ_T0071139.1 MGP_LPJ_G0029391.1 mouse_genomes_project 5 35335924 35360294 - Tbc1d14 protein_coding processed_transcript MGP_LPJ_T0071140.1 MGP_LPJ_G0029391.1 mouse_genomes_project 5 35335986 35369726 - MGP_LPJ_P0071140 Tbc1d14 protein_coding protein_coding MGP_LPJ_T0071141.1 MGP_LPJ_G0029391.1 mouse_genomes_project 5 35367411 35382455 - Tbc1d14 protein_coding retained_intron MGP_LPJ_T0071142.1 MGP_LPJ_G0029391.1 mouse_genomes_project 5 35367775 35382455 - MGP_LPJ_P0071142 Tbc1d14 protein_coding protein_coding MGP_LPJ_T0071143.1 MGP_LPJ_G0029391.1 mouse_genomes_project 5 35367824 35369497 - MGP_LPJ_P0071143 Tbc1d14 protein_coding protein_coding MGP_LPJ_T0071144.1 MGP_LPJ_G0029391.1 mouse_genomes_project 5 35368019 35395350 - MGP_LPJ_P0071144 Tbc1d14 protein_coding protein_coding MGP_LPJ_T0071145.1 MGP_LPJ_G0029391.1 mouse_genomes_project 5 35368247 35395375 - MGP_LPJ_P0071145 Tbc1d14 protein_coding protein_coding MGP_LPJ_T0071667.1 MGP_LPJ_G0029484.1 mouse_genomes_project 5 66044876 66082253 + MGP_LPJ_P0071667 Rhoh protein_coding protein_coding MGP_LPJ_T0071668.1 MGP_LPJ_G0029484.1 mouse_genomes_project 5 66047790 66078996 + MGP_LPJ_P0071668 Rhoh protein_coding protein_coding MGP_LPJ_T0071669.1 MGP_LPJ_G0029484.1 mouse_genomes_project 5 66048363 66052718 + Rhoh protein_coding processed_transcript MGP_LPJ_T0071670.1 MGP_LPJ_G0029484.1 mouse_genomes_project 5 66048401 66053178 + Rhoh protein_coding retained_intron MGP_LPJ_T0015111.1 MGP_LPJ_G0013202.1 mouse_genomes_project 5 138766306 138767150 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102180.1 MGP_LPJ_G0040217.1 mouse_genomes_project 5 88336369 88337432 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008202.1 MGP_LPJ_G0006686.1 mouse_genomes_project 5 83132774 83135077 - 1700031L13Rik lincRNA lincRNA MGP_LPJ_T0008203.1 MGP_LPJ_G0006686.1 mouse_genomes_project 5 83132793 83135080 - 1700031L13Rik lincRNA lincRNA MGP_LPJ_T0008204.1 MGP_LPJ_G0006686.1 mouse_genomes_project 5 83132803 83133712 - 1700031L13Rik lincRNA lincRNA MGP_LPJ_T0008205.1 MGP_LPJ_G0006686.1 mouse_genomes_project 5 83133052 83133704 - 1700031L13Rik lincRNA lincRNA MGP_LPJ_T0008486.1 MGP_LPJ_G0006880.1 mouse_genomes_project 5 156432948 156435610 - Gm43450 lincRNA lincRNA MGP_LPJ_T0001722.1 MGP_LPJ_G0001634.1 mouse_genomes_project 5 74749300 74749766 - TEC TEC MGP_LPJ_T0073570.1 MGP_LPJ_G0029882.1 mouse_genomes_project 5 119922513 119938408 - MGP_LPJ_P0073570 Hspb8 protein_coding protein_coding MGP_LPJ_T0073571.1 MGP_LPJ_G0029882.1 mouse_genomes_project 5 119922962 119929870 - Hspb8 protein_coding processed_transcript MGP_LPJ_T0073921.1 MGP_LPJ_G0029952.1 mouse_genomes_project 5 126549926 126562932 + MGP_LPJ_P0073921 Gpn3 protein_coding nonsense_mediated_decay MGP_LPJ_T0073922.1 MGP_LPJ_G0029952.1 mouse_genomes_project 5 126550501 126562993 + MGP_LPJ_P0073922 Gpn3 protein_coding protein_coding MGP_LPJ_T0073923.1 MGP_LPJ_G0029952.1 mouse_genomes_project 5 126550577 126558818 + Gpn3 protein_coding retained_intron MGP_LPJ_T0073924.1 MGP_LPJ_G0029952.1 mouse_genomes_project 5 126552034 126562390 + MGP_LPJ_P0073924 Gpn3 protein_coding nonsense_mediated_decay MGP_LPJ_T0073925.1 MGP_LPJ_G0029952.1 mouse_genomes_project 5 126561358 126562993 + MGP_LPJ_P0073925 Gpn3 protein_coding nonsense_mediated_decay MGP_LPJ_T0073926.1 MGP_LPJ_G0029952.1 mouse_genomes_project 5 126561383 126562623 + MGP_LPJ_P0073926 Gpn3 protein_coding protein_coding MGP_LPJ_T0071782.1 MGP_LPJ_G0029498.1 mouse_genomes_project 5 68199565 68218688 - MGP_LPJ_P0071782 Gm21905 protein_coding protein_coding MGP_LPJ_T0001874.1 MGP_LPJ_G0001785.1 mouse_genomes_project 5 135603068 135605176 - TEC TEC MGP_LPJ_T0011624.1 MGP_LPJ_G0009742.1 mouse_genomes_project 5 121856762 121857052 - Gm24050 misc_RNA misc_RNA MGP_LPJ_T0004899.1 MGP_LPJ_G0004212.1 mouse_genomes_project 5 145756119 145762512 + Gm16121 antisense antisense MGP_LPJ_T0015087.1 MGP_LPJ_G0013178.1 mouse_genomes_project 5 118249662 118249998 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014996.1 MGP_LPJ_G0013087.1 mouse_genomes_project 5 80372507 80373618 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001614.1 MGP_LPJ_G0001528.1 mouse_genomes_project 5 50890208 50892010 - TEC TEC MGP_LPJ_T0004921.1 MGP_LPJ_G0004228.1 mouse_genomes_project 5 156874909 156890204 - Gm42556 antisense antisense MGP_LPJ_T0001882.1 MGP_LPJ_G0001793.1 mouse_genomes_project 5 136473954 136475087 - TEC TEC MGP_LPJ_T0001838.1 MGP_LPJ_G0001750.1 mouse_genomes_project 5 126674172 126678851 + TEC TEC MGP_LPJ_T0001697.1 MGP_LPJ_G0001610.1 mouse_genomes_project 5 68254679 68258359 + TEC TEC MGP_LPJ_T0099627.1 MGP_LPJ_G0037890.1 mouse_genomes_project 5 145034842 145034949 + Gm26285 snRNA snRNA MGP_LPJ_T0102181.1 MGP_LPJ_G0040218.1 mouse_genomes_project 5 88383664 88394131 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008257.1 MGP_LPJ_G0006729.1 mouse_genomes_project 5 106809763 106840552 + D930016D06Rik lincRNA lincRNA MGP_LPJ_T0008258.1 MGP_LPJ_G0006729.1 mouse_genomes_project 5 106809897 106822981 + D930016D06Rik lincRNA lincRNA MGP_LPJ_T0008259.1 MGP_LPJ_G0006729.1 mouse_genomes_project 5 106827162 106838421 + D930016D06Rik lincRNA lincRNA MGP_LPJ_T0008260.1 MGP_LPJ_G0006729.1 mouse_genomes_project 5 106827712 106837828 + D930016D06Rik lincRNA lincRNA MGP_LPJ_T0008261.1 MGP_LPJ_G0006729.1 mouse_genomes_project 5 106827754 106839846 + D930016D06Rik lincRNA lincRNA MGP_LPJ_T0001602.1 MGP_LPJ_G0001516.1 mouse_genomes_project 5 48368219 48368851 - TEC TEC MGP_LPJ_T0072437.1 MGP_LPJ_G0029651.1 mouse_genomes_project 5 93895588 93899210 - Cxcl10 protein_coding retained_intron MGP_LPJ_T0072438.1 MGP_LPJ_G0029651.1 mouse_genomes_project 5 93895588 93899225 - MGP_LPJ_P0072438 Cxcl10 protein_coding protein_coding MGP_LPJ_T0072439.1 MGP_LPJ_G0029651.1 mouse_genomes_project 5 93895755 93899232 - MGP_LPJ_P0072439 Cxcl10 protein_coding protein_coding MGP_LPJ_T0072440.1 MGP_LPJ_G0029651.1 mouse_genomes_project 5 93898343 93899225 - Cxcl10 protein_coding retained_intron MGP_LPJ_T0004807.1 MGP_LPJ_G0004147.1 mouse_genomes_project 5 118054938 118055505 - Gm42789 antisense antisense MGP_LPJ_T0001926.1 MGP_LPJ_G0001836.1 mouse_genomes_project 5 149462660 149463749 + TEC TEC MGP_LPJ_T0074478.1 MGP_LPJ_G0030043.1 mouse_genomes_project 5 134697267 134761248 + MGP_LPJ_P0074478 Tpst1 protein_coding protein_coding MGP_LPJ_T0074479.1 MGP_LPJ_G0030043.1 mouse_genomes_project 5 134703311 134761248 + MGP_LPJ_P0074479 Tpst1 protein_coding protein_coding MGP_LPJ_T0074480.1 MGP_LPJ_G0030043.1 mouse_genomes_project 5 134717534 134726772 + MGP_LPJ_P0074480 Tpst1 protein_coding protein_coding MGP_LPJ_T0074481.1 MGP_LPJ_G0030043.1 mouse_genomes_project 5 134759475 134761231 + Tpst1 protein_coding retained_intron MGP_LPJ_T0072211.1 MGP_LPJ_G0029588.1 mouse_genomes_project 5 88899565 88915215 - MGP_LPJ_P0072211 Sult1d1 protein_coding protein_coding MGP_LPJ_T0072212.1 MGP_LPJ_G0029588.1 mouse_genomes_project 5 88900769 88905021 - Sult1d1 protein_coding processed_transcript MGP_LPJ_T0073592.1 MGP_LPJ_G0029886.1 mouse_genomes_project 5 120867612 120872588 - MGP_LPJ_P0073592 Pebp1 protein_coding protein_coding MGP_LPJ_T0073593.1 MGP_LPJ_G0029886.1 mouse_genomes_project 5 120868097 120872546 - MGP_LPJ_P0073593 Pebp1 protein_coding protein_coding MGP_LPJ_T0073594.1 MGP_LPJ_G0029886.1 mouse_genomes_project 5 120868300 120872531 - MGP_LPJ_P0073594 Pebp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0073595.1 MGP_LPJ_G0029886.1 mouse_genomes_project 5 120870756 120872488 - Pebp1 protein_coding retained_intron MGP_LPJ_T0001568.1 MGP_LPJ_G0001482.1 mouse_genomes_project 5 43758106 43761893 - TEC TEC MGP_LPJ_T0070005.1 MGP_LPJ_G0029198.1 mouse_genomes_project 5 9867237 10080769 + MGP_LPJ_P0070005 Sema3d protein_coding protein_coding MGP_LPJ_T0070006.1 MGP_LPJ_G0029198.1 mouse_genomes_project 5 9867358 10032381 + Sema3d protein_coding processed_transcript MGP_LPJ_T0070007.1 MGP_LPJ_G0029198.1 mouse_genomes_project 5 9867358 10071024 + MGP_LPJ_P0070007 Sema3d protein_coding protein_coding MGP_LPJ_T0070008.1 MGP_LPJ_G0029198.1 mouse_genomes_project 5 9971220 9993114 + Sema3d protein_coding processed_transcript MGP_LPJ_T0070009.1 MGP_LPJ_G0029198.1 mouse_genomes_project 5 10067985 10080573 + Sema3d protein_coding processed_transcript MGP_LPJ_T0075450.1 MGP_LPJ_G0030227.1 mouse_genomes_project 5 149130998 149146499 - MGP_LPJ_P0075450 Spdye4a protein_coding protein_coding MGP_LPJ_T0075804.1 MGP_LPJ_G0030305.1 mouse_genomes_project 5 155696085 155726911 + MGP_LPJ_P0075804 Uspl1 protein_coding protein_coding MGP_LPJ_T0075805.1 MGP_LPJ_G0030305.1 mouse_genomes_project 5 155696096 155705746 + MGP_LPJ_P0075805 Uspl1 protein_coding protein_coding MGP_LPJ_T0075806.1 MGP_LPJ_G0030305.1 mouse_genomes_project 5 155696096 155726911 + MGP_LPJ_P0075806 Uspl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0075807.1 MGP_LPJ_G0030305.1 mouse_genomes_project 5 155696199 155705513 + Uspl1 protein_coding processed_transcript MGP_LPJ_T0075808.1 MGP_LPJ_G0030305.1 mouse_genomes_project 5 155697671 155700423 + Uspl1 protein_coding retained_intron MGP_LPJ_T0075809.1 MGP_LPJ_G0030305.1 mouse_genomes_project 5 155699193 155726742 + MGP_LPJ_P0075809 Uspl1 protein_coding protein_coding MGP_LPJ_T0075810.1 MGP_LPJ_G0030305.1 mouse_genomes_project 5 155700277 155701559 + Uspl1 protein_coding retained_intron MGP_LPJ_T0075811.1 MGP_LPJ_G0030305.1 mouse_genomes_project 5 155702754 155726915 + Uspl1 protein_coding retained_intron MGP_LPJ_T0001922.1 MGP_LPJ_G0001832.1 mouse_genomes_project 5 147085543 147087913 - TEC TEC MGP_LPJ_T0015120.1 MGP_LPJ_G0013211.1 mouse_genomes_project 5 142647646 142648030 + processed_pseudogene processed_pseudogene MGP_LPJ_T0018122.1 MGP_LPJ_G0015526.1 mouse_genomes_project 5 113160008 113167987 - Gm15787 processed_transcript antisense MGP_LPJ_T0018123.1 MGP_LPJ_G0015526.1 mouse_genomes_project 5 113160620 113181838 - Gm15787 processed_transcript processed_transcript MGP_LPJ_T0018124.1 MGP_LPJ_G0015526.1 mouse_genomes_project 5 113167997 113181777 - Gm15787 processed_transcript antisense MGP_LPJ_T0018125.1 MGP_LPJ_G0015526.1 mouse_genomes_project 5 113172996 113181838 - Gm15787 processed_transcript antisense MGP_LPJ_T0018126.1 MGP_LPJ_G0015526.1 mouse_genomes_project 5 113173683 113181800 - Gm15787 processed_transcript antisense MGP_LPJ_T0018127.1 MGP_LPJ_G0015526.1 mouse_genomes_project 5 113173745 113175385 - Gm15787 processed_transcript antisense MGP_LPJ_T0018128.1 MGP_LPJ_G0015526.1 mouse_genomes_project 5 113175086 113181838 - Gm15787 processed_transcript antisense MGP_LPJ_T0018129.1 MGP_LPJ_G0015526.1 mouse_genomes_project 5 113175609 113181774 - Gm15787 processed_transcript antisense MGP_LPJ_T0001550.1 MGP_LPJ_G0001464.1 mouse_genomes_project 5 42200843 42205340 - TEC TEC MGP_LPJ_T0099581.1 MGP_LPJ_G0037844.1 mouse_genomes_project 5 70503863 70503925 - Gm23067 snRNA snRNA MGP_LPJ_T0014796.1 MGP_LPJ_G0012887.1 mouse_genomes_project 5 3688387 3688676 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098638.1 MGP_LPJ_G0036911.1 mouse_genomes_project 5 148767490 148771783 - D430018E03Rik sense_intronic sense_intronic MGP_LPJ_T0073464.1 MGP_LPJ_G0029864.1 mouse_genomes_project 5 118704139 118722263 + MGP_LPJ_P0073464 Coq5 protein_coding protein_coding MGP_LPJ_T0073465.1 MGP_LPJ_G0029864.1 mouse_genomes_project 5 118704168 118705257 + Coq5 protein_coding retained_intron MGP_LPJ_T0073466.1 MGP_LPJ_G0029864.1 mouse_genomes_project 5 118709002 118721600 + MGP_LPJ_P0073466 Coq5 protein_coding nonsense_mediated_decay MGP_LPJ_T0071946.1 MGP_LPJ_G0029532.1 mouse_genomes_project 5 74700603 75054967 - MGP_LPJ_P0071946 Scfd2 protein_coding protein_coding MGP_LPJ_T0071947.1 MGP_LPJ_G0029532.1 mouse_genomes_project 5 74700866 74788952 - Scfd2 protein_coding processed_transcript MGP_LPJ_T0071948.1 MGP_LPJ_G0029532.1 mouse_genomes_project 5 74703595 74724390 - Scfd2 protein_coding retained_intron MGP_LPJ_T0071949.1 MGP_LPJ_G0029532.1 mouse_genomes_project 5 74703598 75054970 - MGP_LPJ_P0071949 Scfd2 protein_coding protein_coding MGP_LPJ_T0071950.1 MGP_LPJ_G0029532.1 mouse_genomes_project 5 74914357 74917006 - MGP_LPJ_P0071950 Scfd2 protein_coding protein_coding MGP_LPJ_T0071951.1 MGP_LPJ_G0029532.1 mouse_genomes_project 5 74969059 75054947 - MGP_LPJ_P0071951 Scfd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0071952.1 MGP_LPJ_G0029532.1 mouse_genomes_project 5 74977612 75054977 - MGP_LPJ_P0071952 Scfd2 protein_coding protein_coding MGP_LPJ_T0071953.1 MGP_LPJ_G0029532.1 mouse_genomes_project 5 74979725 75001482 - Scfd2 protein_coding retained_intron MGP_LPJ_T0071954.1 MGP_LPJ_G0029532.1 mouse_genomes_project 5 75032779 75054960 - Scfd2 protein_coding processed_transcript MGP_LPJ_T0001901.1 MGP_LPJ_G0001812.1 mouse_genomes_project 5 138940133 138941099 - TEC TEC MGP_LPJ_T0001866.1 MGP_LPJ_G0001777.1 mouse_genomes_project 5 134115346 134116285 - TEC TEC MGP_LPJ_T0015077.1 MGP_LPJ_G0013168.1 mouse_genomes_project 5 113505527 113506974 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001576.1 MGP_LPJ_G0001490.1 mouse_genomes_project 5 44965462 44968878 - TEC TEC MGP_LPJ_T0074931.1 MGP_LPJ_G0030121.1 mouse_genomes_project 5 142266190 142279574 - MGP_LPJ_P0074931 Trim56 protein_coding protein_coding MGP_LPJ_T0074932.1 MGP_LPJ_G0030121.1 mouse_genomes_project 5 142277390 142279576 - MGP_LPJ_P0074932 Trim56 protein_coding protein_coding MGP_LPJ_T0101369.1 MGP_LPJ_G0039567.1 mouse_genomes_project 5 122160648 122184581 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101370.1 MGP_LPJ_G0039567.1 mouse_genomes_project 5 122183920 122184398 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0004874.1 MGP_LPJ_G0004194.1 mouse_genomes_project 5 139341300 139343341 + Gm42882 antisense antisense MGP_LPJ_T0010753.1 MGP_LPJ_G0008871.1 mouse_genomes_project 5 144154593 144154676 + Gm24082 miRNA miRNA MGP_LPJ_T0102175.1 MGP_LPJ_G0040212.1 mouse_genomes_project 5 68841767 68867790 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0001501.1 MGP_LPJ_G0001418.1 mouse_genomes_project 5 19957469 19959356 - TEC TEC MGP_LPJ_T0075478.1 MGP_LPJ_G0030233.1 mouse_genomes_project 5 149288470 149323140 + MGP_LPJ_P0075478 Grid2ip protein_coding protein_coding MGP_LPJ_T0075479.1 MGP_LPJ_G0030233.1 mouse_genomes_project 5 149294948 149323470 + MGP_LPJ_P0075479 Grid2ip protein_coding protein_coding MGP_LPJ_T0075480.1 MGP_LPJ_G0030233.1 mouse_genomes_project 5 149300702 149323824 + MGP_LPJ_P0075480 Grid2ip protein_coding protein_coding MGP_LPJ_T0075481.1 MGP_LPJ_G0030233.1 mouse_genomes_project 5 149303579 149306341 + Grid2ip protein_coding retained_intron MGP_LPJ_T0075482.1 MGP_LPJ_G0030233.1 mouse_genomes_project 5 149306068 149311090 + Grid2ip protein_coding retained_intron MGP_LPJ_T0011620.1 MGP_LPJ_G0009738.1 mouse_genomes_project 5 115352728 115353089 - Gm27998 misc_RNA misc_RNA MGP_LPJ_T0001880.1 MGP_LPJ_G0001791.1 mouse_genomes_project 5 136409231 136412091 - TEC TEC MGP_LPJ_T0071062.1 MGP_LPJ_G0029378.1 mouse_genomes_project 5 34093306 34103971 + MGP_LPJ_P0071062 Hmx1 protein_coding protein_coding MGP_LPJ_T0071063.1 MGP_LPJ_G0029378.1 mouse_genomes_project 5 34093315 34097089 + MGP_LPJ_P0071063 Hmx1 protein_coding protein_coding MGP_LPJ_T0001618.1 MGP_LPJ_G0001532.1 mouse_genomes_project 5 51289658 51293673 - TEC TEC MGP_LPJ_T0072727.1 MGP_LPJ_G0029708.1 mouse_genomes_project 5 106279253 106293870 + MGP_LPJ_P0072727 Nudt9 protein_coding protein_coding MGP_LPJ_T0072728.1 MGP_LPJ_G0029708.1 mouse_genomes_project 5 106279473 106295450 + MGP_LPJ_P0072728 Nudt9 protein_coding protein_coding MGP_LPJ_T0072729.1 MGP_LPJ_G0029708.1 mouse_genomes_project 5 106279816 106301070 + MGP_LPJ_P0072729 Nudt9 protein_coding protein_coding MGP_LPJ_T0072730.1 MGP_LPJ_G0029708.1 mouse_genomes_project 5 106279915 106294104 + Nudt9 protein_coding retained_intron MGP_LPJ_T0072731.1 MGP_LPJ_G0029708.1 mouse_genomes_project 5 106280101 106293850 + MGP_LPJ_P0072731 Nudt9 protein_coding protein_coding MGP_LPJ_T0072732.1 MGP_LPJ_G0029708.1 mouse_genomes_project 5 106280568 106291193 + MGP_LPJ_P0072732 Nudt9 protein_coding protein_coding MGP_LPJ_T0008475.1 MGP_LPJ_G0006875.1 mouse_genomes_project 5 155744386 155751024 + 2310047D07Rik lincRNA lincRNA MGP_LPJ_T0008477.1 MGP_LPJ_G0006875.1 mouse_genomes_project 5 155750193 155751006 + 2310047D07Rik lincRNA lincRNA MGP_LPJ_T0015054.1 MGP_LPJ_G0013145.1 mouse_genomes_project 5 108892797 108893120 - processed_pseudogene processed_pseudogene MGP_LPJ_T0074665.1 MGP_LPJ_G0030071.1 mouse_genomes_project 5 139917318 139918577 + MGP_LPJ_P0074665 Cldn3 protein_coding protein_coding MGP_LPJ_T0099602.1 MGP_LPJ_G0037865.1 mouse_genomes_project 5 106126122 106126229 + Gm24897 snRNA snRNA MGP_LPJ_T0070330.1 MGP_LPJ_G0029259.1 mouse_genomes_project 5 23412464 23412770 - MGP_LPJ_P0070330 E130116L18Rik protein_coding protein_coding MGP_LPJ_T0098619.1 MGP_LPJ_G0036893.1 mouse_genomes_project 5 32843545 32846107 - Gm15513 sense_intronic sense_intronic MGP_LPJ_T0070116.1 MGP_LPJ_G0029219.1 mouse_genomes_project 5 19616429 19634212 + MGP_LPJ_P0070116 Armc10 protein_coding protein_coding MGP_LPJ_T0070117.1 MGP_LPJ_G0029219.1 mouse_genomes_project 5 19616620 19619273 + Armc10 protein_coding processed_transcript MGP_LPJ_T0070118.1 MGP_LPJ_G0029219.1 mouse_genomes_project 5 19616706 19634214 + MGP_LPJ_P0070118 Armc10 protein_coding protein_coding MGP_LPJ_T0070119.1 MGP_LPJ_G0029219.1 mouse_genomes_project 5 19619122 19622614 + Armc10 protein_coding retained_intron MGP_LPJ_T0072082.1 MGP_LPJ_G0029553.1 mouse_genomes_project 5 77657943 77663359 + MGP_LPJ_P0072082 Arl9 protein_coding protein_coding MGP_LPJ_T0072083.1 MGP_LPJ_G0029553.1 mouse_genomes_project 5 77660346 77664487 + MGP_LPJ_P0072083 Arl9 protein_coding protein_coding MGP_LPJ_T0015124.1 MGP_LPJ_G0013215.1 mouse_genomes_project 5 143197910 143198145 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001551.1 MGP_LPJ_G0001465.1 mouse_genomes_project 5 42306010 42308342 + TEC TEC MGP_LPJ_T0008473.1 MGP_LPJ_G0006873.1 mouse_genomes_project 5 155652671 155661947 + Gm42788 lincRNA lincRNA MGP_LPJ_T0004840.1 MGP_LPJ_G0004169.1 mouse_genomes_project 5 125385098 125386670 + Gm42918 antisense antisense MGP_LPJ_T0072315.1 MGP_LPJ_G0029619.1 mouse_genomes_project 5 91667717 91677044 - MGP_LPJ_P0072315 Cox18 protein_coding protein_coding MGP_LPJ_T0072316.1 MGP_LPJ_G0029619.1 mouse_genomes_project 5 91667717 91677015 - MGP_LPJ_P0072316 Cox18 protein_coding protein_coding MGP_LPJ_T0072317.1 MGP_LPJ_G0029619.1 mouse_genomes_project 5 91667720 91668575 - Cox18 protein_coding processed_transcript MGP_LPJ_T0072318.1 MGP_LPJ_G0029619.1 mouse_genomes_project 5 91667720 91670872 - Cox18 protein_coding retained_intron MGP_LPJ_T0072319.1 MGP_LPJ_G0029619.1 mouse_genomes_project 5 91667723 91669016 - Cox18 protein_coding retained_intron MGP_LPJ_T0072320.1 MGP_LPJ_G0029619.1 mouse_genomes_project 5 91670526 91672785 - Cox18 protein_coding retained_intron MGP_LPJ_T0072321.1 MGP_LPJ_G0029619.1 mouse_genomes_project 5 91671927 91676982 - MGP_LPJ_P0072321 Cox18 protein_coding nonsense_mediated_decay MGP_LPJ_T0100859.1 MGP_LPJ_G0039122.1 mouse_genomes_project 5 121916192 121916324 + Gm25076 snoRNA snoRNA MGP_LPJ_T0075395.1 MGP_LPJ_G0030216.1 mouse_genomes_project 5 148382143 148386382 - MGP_LPJ_P0075395 Papolb protein_coding protein_coding MGP_LPJ_T0001657.1 MGP_LPJ_G0001570.1 mouse_genomes_project 5 65547945 65548712 + TEC TEC MGP_LPJ_T0075105.1 MGP_LPJ_G0030157.1 mouse_genomes_project 5 143431172 143461720 + MGP_LPJ_P0075105 Zscan21 protein_coding protein_coding MGP_LPJ_T0075106.1 MGP_LPJ_G0030157.1 mouse_genomes_project 5 143431185 143461772 + MGP_LPJ_P0075106 Zscan21 protein_coding protein_coding MGP_LPJ_T0075107.1 MGP_LPJ_G0030157.1 mouse_genomes_project 5 143431206 143461721 + MGP_LPJ_P0075107 Zscan21 protein_coding protein_coding MGP_LPJ_T0075108.1 MGP_LPJ_G0030157.1 mouse_genomes_project 5 143431206 143461772 + MGP_LPJ_P0075108 Zscan21 protein_coding protein_coding MGP_LPJ_T0075109.1 MGP_LPJ_G0030157.1 mouse_genomes_project 5 143431249 143460754 + MGP_LPJ_P0075109 Zscan21 protein_coding protein_coding MGP_LPJ_T0075110.1 MGP_LPJ_G0030157.1 mouse_genomes_project 5 143431251 143438892 + MGP_LPJ_P0075110 Zscan21 protein_coding protein_coding MGP_LPJ_T0075111.1 MGP_LPJ_G0030157.1 mouse_genomes_project 5 143431310 143461723 + MGP_LPJ_P0075111 Zscan21 protein_coding protein_coding MGP_LPJ_T0004681.1 MGP_LPJ_G0004054.1 mouse_genomes_project 5 29959634 29960954 - 4930566F21Rik antisense antisense MGP_LPJ_T0004682.1 MGP_LPJ_G0004054.1 mouse_genomes_project 5 29959638 29968682 - 4930566F21Rik antisense antisense MGP_LPJ_T0075077.1 MGP_LPJ_G0030148.1 mouse_genomes_project 5 143059393 143064273 - MGP_LPJ_P0075077 Mepce protein_coding protein_coding MGP_LPJ_T0075078.1 MGP_LPJ_G0030148.1 mouse_genomes_project 5 143059916 143064325 - MGP_LPJ_P0075078 Mepce protein_coding protein_coding MGP_LPJ_T0075079.1 MGP_LPJ_G0030148.1 mouse_genomes_project 5 143059970 143060838 - Mepce protein_coding retained_intron MGP_LPJ_T0075080.1 MGP_LPJ_G0030148.1 mouse_genomes_project 5 143060617 143065265 - MGP_LPJ_P0075080 Mepce protein_coding protein_coding MGP_LPJ_T0075081.1 MGP_LPJ_G0030148.1 mouse_genomes_project 5 143062373 143064301 - Mepce protein_coding processed_transcript MGP_LPJ_T0074028.1 MGP_LPJ_G0029965.1 mouse_genomes_project 5 127284150 127336291 + Tmem120b protein_coding processed_transcript MGP_LPJ_T0074029.1 MGP_LPJ_G0029965.1 mouse_genomes_project 5 127292812 127337358 + MGP_LPJ_P0074029 Tmem120b protein_coding protein_coding MGP_LPJ_T0074030.1 MGP_LPJ_G0029965.1 mouse_genomes_project 5 127292862 127334749 + MGP_LPJ_P0074030 Tmem120b protein_coding nonsense_mediated_decay MGP_LPJ_T0074031.1 MGP_LPJ_G0029965.1 mouse_genomes_project 5 127292863 127336618 + MGP_LPJ_P0074031 Tmem120b protein_coding protein_coding MGP_LPJ_T0074032.1 MGP_LPJ_G0029965.1 mouse_genomes_project 5 127292878 127334767 + MGP_LPJ_P0074032 Tmem120b protein_coding protein_coding MGP_LPJ_T0074033.1 MGP_LPJ_G0029965.1 mouse_genomes_project 5 127292888 127322603 + Tmem120b protein_coding retained_intron MGP_LPJ_T0074034.1 MGP_LPJ_G0029965.1 mouse_genomes_project 5 127292907 127318380 + Tmem120b protein_coding retained_intron MGP_LPJ_T0074035.1 MGP_LPJ_G0029965.1 mouse_genomes_project 5 127317912 127335429 + Tmem120b protein_coding retained_intron MGP_LPJ_T0075275.1 MGP_LPJ_G0030187.1 mouse_genomes_project 5 144994838 145005182 + MGP_LPJ_P0075275 C130050O18Rik protein_coding protein_coding MGP_LPJ_T0075276.1 MGP_LPJ_G0030187.1 mouse_genomes_project 5 144995947 145005179 + MGP_LPJ_P0075276 C130050O18Rik protein_coding protein_coding MGP_LPJ_T0075277.1 MGP_LPJ_G0030187.1 mouse_genomes_project 5 144996025 145005184 + MGP_LPJ_P0075277 C130050O18Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0071157.1 MGP_LPJ_G0029396.1 mouse_genomes_project 5 35655737 35748378 + MGP_LPJ_P0071157 Ppp2r2c protein_coding protein_coding MGP_LPJ_T0071158.1 MGP_LPJ_G0029396.1 mouse_genomes_project 5 35655887 35720053 + MGP_LPJ_P0071158 Ppp2r2c protein_coding protein_coding MGP_LPJ_T0071159.1 MGP_LPJ_G0029396.1 mouse_genomes_project 5 35732645 35733520 + Ppp2r2c protein_coding processed_transcript MGP_LPJ_T0071490.1 MGP_LPJ_G0029451.1 mouse_genomes_project 5 52526650 52549967 + MGP_LPJ_P0071490 Slc34a2 protein_coding protein_coding MGP_LPJ_T0071491.1 MGP_LPJ_G0029451.1 mouse_genomes_project 5 52537920 52560175 + MGP_LPJ_P0071491 Slc34a2 protein_coding protein_coding MGP_LPJ_T0071492.1 MGP_LPJ_G0029451.1 mouse_genomes_project 5 52537921 52554893 + Slc34a2 protein_coding retained_intron MGP_LPJ_T0074139.1 MGP_LPJ_G0029981.1 mouse_genomes_project 5 128049817 128054742 + Kntc1 protein_coding retained_intron MGP_LPJ_T0074140.1 MGP_LPJ_G0029981.1 mouse_genomes_project 5 128049827 128123581 + MGP_LPJ_P0074140 Kntc1 protein_coding protein_coding MGP_LPJ_T0074141.1 MGP_LPJ_G0029981.1 mouse_genomes_project 5 128074897 128081775 + Kntc1 protein_coding processed_transcript MGP_LPJ_T0074142.1 MGP_LPJ_G0029981.1 mouse_genomes_project 5 128083321 128084212 + MGP_LPJ_P0074142 Kntc1 protein_coding protein_coding MGP_LPJ_T0074143.1 MGP_LPJ_G0029981.1 mouse_genomes_project 5 128089343 128092258 + Kntc1 protein_coding retained_intron MGP_LPJ_T0074144.1 MGP_LPJ_G0029981.1 mouse_genomes_project 5 128113462 128123579 + MGP_LPJ_P0074144 Kntc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0074145.1 MGP_LPJ_G0029981.1 mouse_genomes_project 5 128121536 128123580 + Kntc1 protein_coding retained_intron MGP_LPJ_T0004774.1 MGP_LPJ_G0004125.1 mouse_genomes_project 5 102790393 102798253 + Gm15777 antisense antisense MGP_LPJ_T0074059.1 MGP_LPJ_G0029970.1 mouse_genomes_project 5 127508926 127586728 + MGP_LPJ_P0074059 Wdr66 protein_coding protein_coding MGP_LPJ_T0074060.1 MGP_LPJ_G0029970.1 mouse_genomes_project 5 127528162 127555840 + Wdr66 protein_coding retained_intron MGP_LPJ_T0074061.1 MGP_LPJ_G0029970.1 mouse_genomes_project 5 127528162 127551877 + MGP_LPJ_P0074061 Wdr66 protein_coding protein_coding MGP_LPJ_T0074062.1 MGP_LPJ_G0029970.1 mouse_genomes_project 5 127530024 127555791 + Wdr66 protein_coding retained_intron MGP_LPJ_T0074063.1 MGP_LPJ_G0029970.1 mouse_genomes_project 5 127534586 127535937 + Wdr66 protein_coding retained_intron MGP_LPJ_T0074064.1 MGP_LPJ_G0029970.1 mouse_genomes_project 5 127548071 127586728 + MGP_LPJ_P0074064 Wdr66 protein_coding nonsense_mediated_decay MGP_LPJ_T0074065.1 MGP_LPJ_G0029970.1 mouse_genomes_project 5 127551963 127586564 + MGP_LPJ_P0074065 Wdr66 protein_coding protein_coding MGP_LPJ_T0074066.1 MGP_LPJ_G0029970.1 mouse_genomes_project 5 127560578 127586583 + Wdr66 protein_coding retained_intron MGP_LPJ_T0073074.1 MGP_LPJ_G0029789.1 mouse_genomes_project 5 113377526 113467879 - MGP_LPJ_P0073074 Fbrsl1 protein_coding protein_coding MGP_LPJ_T0073075.1 MGP_LPJ_G0029789.1 mouse_genomes_project 5 113378563 113467862 - MGP_LPJ_P0073075 Fbrsl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0073076.1 MGP_LPJ_G0029789.1 mouse_genomes_project 5 113378814 113467569 - MGP_LPJ_P0073076 Fbrsl1 protein_coding protein_coding MGP_LPJ_T0073077.1 MGP_LPJ_G0029789.1 mouse_genomes_project 5 113396236 113451355 - MGP_LPJ_P0073077 Fbrsl1 protein_coding protein_coding MGP_LPJ_T0073078.1 MGP_LPJ_G0029789.1 mouse_genomes_project 5 113448215 113450203 - Fbrsl1 protein_coding processed_transcript MGP_LPJ_T0073079.1 MGP_LPJ_G0029789.1 mouse_genomes_project 5 113450335 113451662 - Fbrsl1 protein_coding processed_transcript MGP_LPJ_T0073080.1 MGP_LPJ_G0029789.1 mouse_genomes_project 5 113450335 113467879 - MGP_LPJ_P0073080 Fbrsl1 protein_coding protein_coding MGP_LPJ_T0008497.1 MGP_LPJ_G0006888.1 mouse_genomes_project 5 157892376 157898155 + Gm42904 lincRNA lincRNA MGP_LPJ_T0074218.1 MGP_LPJ_G0029996.1 mouse_genomes_project 5 128722862 128784059 - MGP_LPJ_P0074218 Sbno1 protein_coding protein_coding MGP_LPJ_T0074219.1 MGP_LPJ_G0029996.1 mouse_genomes_project 5 128722868 128783174 - MGP_LPJ_P0074219 Sbno1 protein_coding protein_coding MGP_LPJ_T0074220.1 MGP_LPJ_G0029996.1 mouse_genomes_project 5 128728722 128771407 - MGP_LPJ_P0074220 Sbno1 protein_coding protein_coding MGP_LPJ_T0074221.1 MGP_LPJ_G0029996.1 mouse_genomes_project 5 128731298 128739699 - Sbno1 protein_coding retained_intron MGP_LPJ_T0074222.1 MGP_LPJ_G0029996.1 mouse_genomes_project 5 128740838 128743510 - Sbno1 protein_coding retained_intron MGP_LPJ_T0074223.1 MGP_LPJ_G0029996.1 mouse_genomes_project 5 128747116 128747768 - Sbno1 protein_coding retained_intron MGP_LPJ_T0074224.1 MGP_LPJ_G0029996.1 mouse_genomes_project 5 128747764 128749276 - Sbno1 protein_coding retained_intron MGP_LPJ_T0074225.1 MGP_LPJ_G0029996.1 mouse_genomes_project 5 128749810 128783157 - MGP_LPJ_P0074225 Sbno1 protein_coding protein_coding MGP_LPJ_T0074226.1 MGP_LPJ_G0029996.1 mouse_genomes_project 5 128749826 128753120 - Sbno1 protein_coding retained_intron MGP_LPJ_T0074227.1 MGP_LPJ_G0029996.1 mouse_genomes_project 5 128749828 128784146 - MGP_LPJ_P0074227 Sbno1 protein_coding protein_coding MGP_LPJ_T0074228.1 MGP_LPJ_G0029996.1 mouse_genomes_project 5 128752785 128754025 - Sbno1 protein_coding retained_intron MGP_LPJ_T0074229.1 MGP_LPJ_G0029996.1 mouse_genomes_project 5 128752785 128784102 - MGP_LPJ_P0074229 Sbno1 protein_coding protein_coding MGP_LPJ_T0074230.1 MGP_LPJ_G0029996.1 mouse_genomes_project 5 128755509 128783156 - MGP_LPJ_P0074230 Sbno1 protein_coding nonsense_mediated_decay MGP_LPJ_T0074231.1 MGP_LPJ_G0029996.1 mouse_genomes_project 5 128756882 128762632 - MGP_LPJ_P0074231 Sbno1 protein_coding nonsense_mediated_decay MGP_LPJ_T0074232.1 MGP_LPJ_G0029996.1 mouse_genomes_project 5 128763997 128783148 - MGP_LPJ_P0074232 Sbno1 protein_coding protein_coding MGP_LPJ_T0074233.1 MGP_LPJ_G0029996.1 mouse_genomes_project 5 128766991 128783132 - MGP_LPJ_P0074233 Sbno1 protein_coding protein_coding MGP_LPJ_T0074234.1 MGP_LPJ_G0029996.1 mouse_genomes_project 5 128767223 128777432 - MGP_LPJ_P0074234 Sbno1 protein_coding protein_coding MGP_LPJ_T0074235.1 MGP_LPJ_G0029996.1 mouse_genomes_project 5 128781072 128783106 - Sbno1 protein_coding retained_intron MGP_LPJ_T0072335.1 MGP_LPJ_G0029621.1 mouse_genomes_project 5 91822764 91824058 + MGP_LPJ_P0072335 Gm9958 protein_coding protein_coding MGP_LPJ_T0073576.1 MGP_LPJ_G0029884.1 mouse_genomes_project 5 120659255 120683756 - MGP_LPJ_P0073576 Suds3 protein_coding protein_coding MGP_LPJ_T0073577.1 MGP_LPJ_G0029884.1 mouse_genomes_project 5 120659260 120672045 - Suds3 protein_coding retained_intron MGP_LPJ_T0073578.1 MGP_LPJ_G0029884.1 mouse_genomes_project 5 120660012 120683871 - MGP_LPJ_P0073578 Suds3 protein_coding protein_coding MGP_LPJ_T0073579.1 MGP_LPJ_G0029884.1 mouse_genomes_project 5 120662533 120666385 - Suds3 protein_coding retained_intron MGP_LPJ_T0073580.1 MGP_LPJ_G0029884.1 mouse_genomes_project 5 120672931 120681309 - Suds3 protein_coding retained_intron MGP_LPJ_T0073581.1 MGP_LPJ_G0029884.1 mouse_genomes_project 5 120672937 120677495 - Suds3 protein_coding retained_intron MGP_LPJ_T0015089.1 MGP_LPJ_G0013180.1 mouse_genomes_project 5 118607552 118607915 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008194.1 MGP_LPJ_G0006679.1 mouse_genomes_project 5 77111472 77143813 + lincRNA lincRNA MGP_LPJ_T0008195.1 MGP_LPJ_G0006679.1 mouse_genomes_project 5 77111763 77143769 + lincRNA lincRNA MGP_LPJ_T0015148.1 MGP_LPJ_G0013239.1 mouse_genomes_project 5 151471350 151471543 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008132.1 MGP_LPJ_G0006627.1 mouse_genomes_project 5 42418272 42420457 - Gm43020 lincRNA lincRNA MGP_LPJ_T0014906.1 MGP_LPJ_G0012997.1 mouse_genomes_project 5 39287883 39288924 + processed_pseudogene processed_pseudogene MGP_LPJ_T0069938.1 MGP_LPJ_G0029187.1 mouse_genomes_project 5 5490385 5520477 - MGP_LPJ_P0069938 Dbf4 protein_coding protein_coding MGP_LPJ_T0069939.1 MGP_LPJ_G0029187.1 mouse_genomes_project 5 5490423 5520513 - MGP_LPJ_P0069939 Dbf4 protein_coding protein_coding MGP_LPJ_T0069940.1 MGP_LPJ_G0029187.1 mouse_genomes_project 5 5490566 5520379 - MGP_LPJ_P0069940 Dbf4 protein_coding protein_coding MGP_LPJ_T0069941.1 MGP_LPJ_G0029187.1 mouse_genomes_project 5 5491264 5498140 - Dbf4 protein_coding retained_intron MGP_LPJ_T0069943.1 MGP_LPJ_G0029187.1 mouse_genomes_project 5 5499471 5520478 - Dbf4 protein_coding retained_intron MGP_LPJ_T0069944.1 MGP_LPJ_G0029187.1 mouse_genomes_project 5 5500923 5503025 - Dbf4 protein_coding retained_intron MGP_LPJ_T0069945.1 MGP_LPJ_G0029187.1 mouse_genomes_project 5 5516226 5520491 - Dbf4 protein_coding processed_transcript MGP_LPJ_T0069946.1 MGP_LPJ_G0029187.1 mouse_genomes_project 5 5519980 5520466 - Dbf4 protein_coding retained_intron MGP_LPJ_T0008093.1 MGP_LPJ_G0006603.1 mouse_genomes_project 5 28398287 28413195 - Gm42806 lincRNA lincRNA MGP_LPJ_T0008094.1 MGP_LPJ_G0006603.1 mouse_genomes_project 5 28406531 28412180 - Gm42806 lincRNA lincRNA MGP_LPJ_T0001540.1 MGP_LPJ_G0001454.1 mouse_genomes_project 5 34100296 34100751 + TEC TEC MGP_LPJ_T0071064.1 MGP_LPJ_G0029379.1 mouse_genomes_project 5 34212550 34244255 - MGP_LPJ_P0071064 Cpz protein_coding protein_coding MGP_LPJ_T0071065.1 MGP_LPJ_G0029379.1 mouse_genomes_project 5 34234084 34244128 - MGP_LPJ_P0071065 Cpz protein_coding protein_coding MGP_LPJ_T0011619.1 MGP_LPJ_G0009737.1 mouse_genomes_project 5 114407435 114407595 - Gm27680 misc_RNA misc_RNA MGP_LPJ_T0014970.1 MGP_LPJ_G0013061.1 mouse_genomes_project 5 68542294 68542619 + processed_pseudogene processed_pseudogene MGP_LPJ_T0073614.1 MGP_LPJ_G0029890.1 mouse_genomes_project 5 121000291 121149308 + Ksr2 protein_coding retained_intron MGP_LPJ_T0073615.1 MGP_LPJ_G0029890.1 mouse_genomes_project 5 121000291 121376508 + MGP_LPJ_P0073615 Ksr2 protein_coding protein_coding MGP_LPJ_T0073616.1 MGP_LPJ_G0029890.1 mouse_genomes_project 5 121001112 121369806 + MGP_LPJ_P0073616 Ksr2 protein_coding unknown_likely_coding MGP_LPJ_T0011603.1 MGP_LPJ_G0009721.1 mouse_genomes_project 5 22980385 22980630 - Gm25363 misc_RNA misc_RNA MGP_LPJ_T0070211.1 MGP_LPJ_G0029236.1 mouse_genomes_project 5 22439008 22473141 - MGP_LPJ_P0070211 Kcnh2 protein_coding protein_coding MGP_LPJ_T0070212.1 MGP_LPJ_G0029236.1 mouse_genomes_project 5 22439008 22451109 - MGP_LPJ_P0070212 Kcnh2 protein_coding protein_coding MGP_LPJ_T0070213.1 MGP_LPJ_G0029236.1 mouse_genomes_project 5 22439502 22441676 - Kcnh2 protein_coding processed_transcript MGP_LPJ_T0070214.1 MGP_LPJ_G0029236.1 mouse_genomes_project 5 22443925 22445225 - Kcnh2 protein_coding processed_transcript MGP_LPJ_T0070215.1 MGP_LPJ_G0029236.1 mouse_genomes_project 5 22444883 22445955 - Kcnh2 protein_coding processed_transcript MGP_LPJ_T0070768.1 MGP_LPJ_G0029333.1 mouse_genomes_project 5 30640048 30662089 + MGP_LPJ_P0070768 Fosl2 protein_coding protein_coding MGP_LPJ_T0070769.1 MGP_LPJ_G0029333.1 mouse_genomes_project 5 30640420 30643897 + Fosl2 protein_coding retained_intron MGP_LPJ_T0070770.1 MGP_LPJ_G0029333.1 mouse_genomes_project 5 30650769 30657960 + Fosl2 protein_coding retained_intron MGP_LPJ_T0001787.1 MGP_LPJ_G0001699.1 mouse_genomes_project 5 114501511 114503634 + TEC TEC MGP_LPJ_T0071659.1 MGP_LPJ_G0029483.1 mouse_genomes_project 5 65940696 65963362 + N4bp2 protein_coding processed_transcript MGP_LPJ_T0071660.1 MGP_LPJ_G0029483.1 mouse_genomes_project 5 65940696 65952980 + N4bp2 protein_coding retained_intron MGP_LPJ_T0071661.1 MGP_LPJ_G0029483.1 mouse_genomes_project 5 65940837 65997468 + MGP_LPJ_P0071661 N4bp2 protein_coding protein_coding MGP_LPJ_T0071662.1 MGP_LPJ_G0029483.1 mouse_genomes_project 5 65940944 66010063 + MGP_LPJ_P0071662 N4bp2 protein_coding unknown_likely_coding MGP_LPJ_T0071663.1 MGP_LPJ_G0029483.1 mouse_genomes_project 5 65960050 65962204 + N4bp2 protein_coding retained_intron MGP_LPJ_T0071664.1 MGP_LPJ_G0029483.1 mouse_genomes_project 5 65980073 65983202 + N4bp2 protein_coding retained_intron MGP_LPJ_T0071665.1 MGP_LPJ_G0029483.1 mouse_genomes_project 5 65988725 65994052 + N4bp2 protein_coding retained_intron MGP_LPJ_T0071666.1 MGP_LPJ_G0029483.1 mouse_genomes_project 5 66005389 66007022 + N4bp2 protein_coding retained_intron MGP_LPJ_T0001600.1 MGP_LPJ_G0001514.1 mouse_genomes_project 5 48362952 48365403 - TEC TEC MGP_LPJ_T0071576.1 MGP_LPJ_G0029469.1 mouse_genomes_project 5 65025357 65035405 - MGP_LPJ_P0071576 Tlr1 protein_coding protein_coding MGP_LPJ_T0071577.1 MGP_LPJ_G0029469.1 mouse_genomes_project 5 65025358 65034657 - MGP_LPJ_P0071577 Tlr1 protein_coding protein_coding MGP_LPJ_T0071578.1 MGP_LPJ_G0029469.1 mouse_genomes_project 5 65034839 65035407 - Tlr1 protein_coding processed_transcript MGP_LPJ_T0073617.1 MGP_LPJ_G0029891.1 mouse_genomes_project 5 121382537 121477058 + MGP_LPJ_P0073617 Nos1 protein_coding protein_coding MGP_LPJ_T0073618.1 MGP_LPJ_G0029891.1 mouse_genomes_project 5 121382560 121476688 + Nos1 protein_coding processed_transcript MGP_LPJ_T0073619.1 MGP_LPJ_G0029891.1 mouse_genomes_project 5 121444064 121586804 + MGP_LPJ_P0073619 Nos1 protein_coding protein_coding MGP_LPJ_T0073620.1 MGP_LPJ_G0029891.1 mouse_genomes_project 5 121444400 121582371 + MGP_LPJ_P0073620 Nos1 protein_coding nonsense_mediated_decay MGP_LPJ_T0073621.1 MGP_LPJ_G0029891.1 mouse_genomes_project 5 121476715 121581917 + MGP_LPJ_P0073621 Nos1 protein_coding protein_coding MGP_LPJ_T0073622.1 MGP_LPJ_G0029891.1 mouse_genomes_project 5 121476720 121581821 + MGP_LPJ_P0073622 Nos1 protein_coding protein_coding MGP_LPJ_T0073623.1 MGP_LPJ_G0029891.1 mouse_genomes_project 5 121533716 121540178 + Nos1 protein_coding processed_transcript MGP_LPJ_T0074249.1 MGP_LPJ_G0029998.1 mouse_genomes_project 5 128824821 128839716 - MGP_LPJ_P0074249 Rilpl2 protein_coding protein_coding MGP_LPJ_T0074250.1 MGP_LPJ_G0029998.1 mouse_genomes_project 5 128836599 128839660 - Rilpl2 protein_coding retained_intron MGP_LPJ_T0008201.1 MGP_LPJ_G0006685.1 mouse_genomes_project 5 78187749 78196383 + Gm42761 lincRNA lincRNA MGP_LPJ_T0072529.1 MGP_LPJ_G0029667.1 mouse_genomes_project 5 98690593 98714233 + MGP_LPJ_P0072529 Anxa3 protein_coding protein_coding MGP_LPJ_T0072530.1 MGP_LPJ_G0029667.1 mouse_genomes_project 5 98690639 98746024 + MGP_LPJ_P0072530 Anxa3 protein_coding protein_coding MGP_LPJ_T0072531.1 MGP_LPJ_G0029667.1 mouse_genomes_project 5 98690695 98723998 + MGP_LPJ_P0072531 Anxa3 protein_coding protein_coding MGP_LPJ_T0072532.1 MGP_LPJ_G0029667.1 mouse_genomes_project 5 98690754 98724939 + MGP_LPJ_P0072532 Anxa3 protein_coding protein_coding MGP_LPJ_T0072533.1 MGP_LPJ_G0029667.1 mouse_genomes_project 5 98708617 98733838 + Anxa3 protein_coding retained_intron MGP_LPJ_T0072534.1 MGP_LPJ_G0029667.1 mouse_genomes_project 5 98714124 98738364 + Anxa3 protein_coding retained_intron MGP_LPJ_T0072535.1 MGP_LPJ_G0029667.1 mouse_genomes_project 5 98726959 98729478 + Anxa3 protein_coding retained_intron MGP_LPJ_T0072536.1 MGP_LPJ_G0029667.1 mouse_genomes_project 5 98729072 98745740 + Anxa3 protein_coding retained_intron MGP_LPJ_T0072537.1 MGP_LPJ_G0029667.1 mouse_genomes_project 5 98742053 98745918 + MGP_LPJ_P0072537 Anxa3 protein_coding protein_coding MGP_LPJ_T0014945.1 MGP_LPJ_G0013036.1 mouse_genomes_project 5 59881114 59881548 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014955.1 MGP_LPJ_G0013046.1 mouse_genomes_project 5 63705706 63706166 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001786.1 MGP_LPJ_G0001698.1 mouse_genomes_project 5 114406700 114407507 - TEC TEC MGP_LPJ_T0001491.1 MGP_LPJ_G0001408.1 mouse_genomes_project 5 12453280 12455551 + TEC TEC MGP_LPJ_T0073682.1 MGP_LPJ_G0029905.1 mouse_genomes_project 5 124310078 124329857 - Plbd2 protein_coding retained_intron MGP_LPJ_T0073683.1 MGP_LPJ_G0029905.1 mouse_genomes_project 5 124310502 124333208 - MGP_LPJ_P0073683 Plbd2 protein_coding protein_coding MGP_LPJ_T0073684.1 MGP_LPJ_G0029905.1 mouse_genomes_project 5 124312130 124329868 - Plbd2 protein_coding retained_intron MGP_LPJ_T0075483.1 MGP_LPJ_G0030234.1 mouse_genomes_project 5 149335221 149353166 + MGP_LPJ_P0075483 Kdelr2 protein_coding protein_coding MGP_LPJ_T0074262.1 MGP_LPJ_G0030002.1 mouse_genomes_project 5 128919125 128931828 + MGP_LPJ_P0074262 Ddx55 protein_coding nonsense_mediated_decay MGP_LPJ_T0074263.1 MGP_LPJ_G0030002.1 mouse_genomes_project 5 128919134 128932605 + MGP_LPJ_P0074263 Ddx55 protein_coding protein_coding MGP_LPJ_T0074264.1 MGP_LPJ_G0030002.1 mouse_genomes_project 5 128919152 128927046 + Ddx55 protein_coding processed_transcript MGP_LPJ_T0074265.1 MGP_LPJ_G0030002.1 mouse_genomes_project 5 128919214 128927102 + Ddx55 protein_coding processed_transcript MGP_LPJ_T0074266.1 MGP_LPJ_G0030002.1 mouse_genomes_project 5 128921917 128923346 + Ddx55 protein_coding retained_intron MGP_LPJ_T0074267.1 MGP_LPJ_G0030002.1 mouse_genomes_project 5 128928216 128931748 + Ddx55 protein_coding processed_transcript MGP_LPJ_T0015025.1 MGP_LPJ_G0013116.1 mouse_genomes_project 5 94586284 94586858 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004885.1 MGP_LPJ_G0004203.1 mouse_genomes_project 5 141172652 141173357 - Gm43604 antisense antisense MGP_LPJ_T0010716.1 MGP_LPJ_G0008834.1 mouse_genomes_project 5 94022225 94022324 + Mir6415 miRNA miRNA MGP_LPJ_T0075501.1 MGP_LPJ_G0030238.1 mouse_genomes_project 5 149570230 149575160 + Cyth3 protein_coding retained_intron MGP_LPJ_T0075502.1 MGP_LPJ_G0030238.1 mouse_genomes_project 5 149570369 149674840 + MGP_LPJ_P0075502 Cyth3 protein_coding protein_coding MGP_LPJ_T0075503.1 MGP_LPJ_G0030238.1 mouse_genomes_project 5 149581791 149659621 + MGP_LPJ_P0075503 Cyth3 protein_coding protein_coding MGP_LPJ_T0075504.1 MGP_LPJ_G0030238.1 mouse_genomes_project 5 149584081 149659523 + MGP_LPJ_P0075504 Cyth3 protein_coding protein_coding MGP_LPJ_T0015095.1 MGP_LPJ_G0013186.1 mouse_genomes_project 5 120929669 120930106 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001840.1 MGP_LPJ_G0001752.1 mouse_genomes_project 5 126978739 126985308 + TEC TEC MGP_LPJ_T0073289.1 MGP_LPJ_G0029831.1 mouse_genomes_project 5 117302706 117370675 - MGP_LPJ_P0073289 Svop protein_coding protein_coding MGP_LPJ_T0073290.1 MGP_LPJ_G0029831.1 mouse_genomes_project 5 117303919 117345389 - Svop protein_coding processed_transcript MGP_LPJ_T0073291.1 MGP_LPJ_G0029831.1 mouse_genomes_project 5 117310764 117321814 - Svop protein_coding retained_intron MGP_LPJ_T0073292.1 MGP_LPJ_G0029831.1 mouse_genomes_project 5 117332711 117370485 - Svop protein_coding retained_intron MGP_LPJ_T0073293.1 MGP_LPJ_G0029831.1 mouse_genomes_project 5 117333478 117370472 - MGP_LPJ_P0073293 Svop protein_coding protein_coding MGP_LPJ_T0001928.1 MGP_LPJ_G0001838.1 mouse_genomes_project 5 150160704 150162500 + TEC TEC MGP_LPJ_T0015134.1 MGP_LPJ_G0013225.1 mouse_genomes_project 5 146248403 146248807 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100852.1 MGP_LPJ_G0039115.1 mouse_genomes_project 5 102115315 102115398 - Gm26363 snoRNA snoRNA MGP_LPJ_T0075565.1 MGP_LPJ_G0030254.1 mouse_genomes_project 5 150700762 150733605 - MGP_LPJ_P0075565 Tmem130 protein_coding protein_coding MGP_LPJ_T0075566.1 MGP_LPJ_G0030254.1 mouse_genomes_project 5 150724211 150733774 - Tmem130 protein_coding processed_transcript MGP_LPJ_T0014921.1 MGP_LPJ_G0013012.1 mouse_genomes_project 5 48722475 48722788 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008076.1 MGP_LPJ_G0006591.1 mouse_genomes_project 5 21931358 21941400 + lincRNA lincRNA MGP_LPJ_T0001642.1 MGP_LPJ_G0001556.1 mouse_genomes_project 5 57657606 57659710 + TEC TEC MGP_LPJ_T0070851.1 MGP_LPJ_G0029348.1 mouse_genomes_project 5 32236564 32238732 + MGP_LPJ_P0070851 Gm9903 protein_coding protein_coding MGP_LPJ_T0014939.1 MGP_LPJ_G0013030.1 mouse_genomes_project 5 57123275 57123906 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004845.1 MGP_LPJ_G0004174.1 mouse_genomes_project 5 126763414 126766776 + Gm43301 antisense antisense MGP_LPJ_T0074456.1 MGP_LPJ_G0030039.1 mouse_genomes_project 5 134553910 134599055 + MGP_LPJ_P0074456 Vkorc1l1 protein_coding protein_coding MGP_LPJ_T0074457.1 MGP_LPJ_G0030039.1 mouse_genomes_project 5 134554052 134601001 + MGP_LPJ_P0074457 Vkorc1l1 protein_coding protein_coding MGP_LPJ_T0074458.1 MGP_LPJ_G0030039.1 mouse_genomes_project 5 134554117 134595925 + MGP_LPJ_P0074458 Vkorc1l1 protein_coding nonsense_mediated_decay MGP_LPJ_T0015162.1 MGP_LPJ_G0013253.1 mouse_genomes_project 5 153770002 153770462 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008168.1 MGP_LPJ_G0006658.1 mouse_genomes_project 5 64691404 64693394 - Gm42564 lincRNA lincRNA MGP_LPJ_T0001817.1 MGP_LPJ_G0001729.1 mouse_genomes_project 5 122307563 122308583 + TEC TEC MGP_LPJ_T0008279.1 MGP_LPJ_G0006745.1 mouse_genomes_project 5 111057843 111058318 - Gm42517 lincRNA lincRNA MGP_LPJ_T0075683.1 MGP_LPJ_G0030281.1 mouse_genomes_project 5 152632740 152716734 + MGP_LPJ_P0075683 Wasf3 protein_coding protein_coding MGP_LPJ_T0004770.1 MGP_LPJ_G0004122.1 mouse_genomes_project 5 101718650 101720686 + 4930522N08Rik antisense antisense MGP_LPJ_T0101365.1 MGP_LPJ_G0039565.1 mouse_genomes_project 5 87301181 87302181 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0101366.1 MGP_LPJ_G0039565.1 mouse_genomes_project 5 87301236 87302320 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0075520.1 MGP_LPJ_G0030243.1 mouse_genomes_project 5 149813969 149841840 + Pms2 protein_coding retained_intron MGP_LPJ_T0075521.1 MGP_LPJ_G0030243.1 mouse_genomes_project 5 149813969 149841840 + Pms2 protein_coding processed_transcript MGP_LPJ_T0075522.1 MGP_LPJ_G0030243.1 mouse_genomes_project 5 149813969 149841840 + MGP_LPJ_P0075522 Pms2 protein_coding protein_coding MGP_LPJ_T0075523.1 MGP_LPJ_G0030243.1 mouse_genomes_project 5 149813995 149839104 + Pms2 protein_coding processed_transcript MGP_LPJ_T0075524.1 MGP_LPJ_G0030243.1 mouse_genomes_project 5 149813995 149839342 + Pms2 protein_coding processed_transcript MGP_LPJ_T0075525.1 MGP_LPJ_G0030243.1 mouse_genomes_project 5 149814004 149825578 + Pms2 protein_coding processed_transcript MGP_LPJ_T0075526.1 MGP_LPJ_G0030243.1 mouse_genomes_project 5 149814009 149821183 + Pms2 protein_coding processed_transcript MGP_LPJ_T0075527.1 MGP_LPJ_G0030243.1 mouse_genomes_project 5 149814030 149834838 + Pms2 protein_coding retained_intron MGP_LPJ_T0075528.1 MGP_LPJ_G0030243.1 mouse_genomes_project 5 149814030 149820721 + Pms2 protein_coding retained_intron MGP_LPJ_T0075529.1 MGP_LPJ_G0030243.1 mouse_genomes_project 5 149814062 149839058 + MGP_LPJ_P0075529 Pms2 protein_coding protein_coding MGP_LPJ_T0075530.1 MGP_LPJ_G0030243.1 mouse_genomes_project 5 149814166 149819889 + Pms2 protein_coding processed_transcript MGP_LPJ_T0075531.1 MGP_LPJ_G0030243.1 mouse_genomes_project 5 149819746 149820342 + Pms2 protein_coding retained_intron MGP_LPJ_T0075532.1 MGP_LPJ_G0030243.1 mouse_genomes_project 5 149827498 149833436 + MGP_LPJ_P0075532 Pms2 protein_coding protein_coding MGP_LPJ_T0074558.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139093734 139173333 - MGP_LPJ_P0074558 Gtf2i protein_coding protein_coding MGP_LPJ_T0074559.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139093738 139173352 - MGP_LPJ_P0074559 Gtf2i protein_coding protein_coding MGP_LPJ_T0074560.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139093738 139173352 - MGP_LPJ_P0074560 Gtf2i protein_coding protein_coding MGP_LPJ_T0074561.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139093739 139173306 - MGP_LPJ_P0074561 Gtf2i protein_coding protein_coding MGP_LPJ_T0074562.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139093742 139152548 - MGP_LPJ_P0074562 Gtf2i protein_coding protein_coding MGP_LPJ_T0074563.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139093742 139152548 - MGP_LPJ_P0074563 Gtf2i protein_coding protein_coding MGP_LPJ_T0074564.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139093742 139152548 - MGP_LPJ_P0074564 Gtf2i protein_coding protein_coding MGP_LPJ_T0074565.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139093742 139173357 - MGP_LPJ_P0074565 Gtf2i protein_coding protein_coding MGP_LPJ_T0074566.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139093742 139152548 - MGP_LPJ_P0074566 Gtf2i protein_coding protein_coding MGP_LPJ_T0074567.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139093743 139137024 - Gtf2i protein_coding processed_transcript MGP_LPJ_T0074568.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139094397 139099463 - MGP_LPJ_P0074568 Gtf2i protein_coding protein_coding MGP_LPJ_T0074569.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139094743 139098312 - Gtf2i protein_coding retained_intron MGP_LPJ_T0074570.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139095413 139152497 - MGP_LPJ_P0074570 Gtf2i protein_coding protein_coding MGP_LPJ_T0074571.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139095555 139096946 - Gtf2i protein_coding retained_intron MGP_LPJ_T0074572.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139096537 139100653 - Gtf2i protein_coding retained_intron MGP_LPJ_T0074573.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139098652 139099645 - Gtf2i protein_coding retained_intron MGP_LPJ_T0074574.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139111584 139129786 - Gtf2i protein_coding retained_intron MGP_LPJ_T0074575.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139111610 139152447 - MGP_LPJ_P0074575 Gtf2i protein_coding protein_coding MGP_LPJ_T0074576.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139115302 139116631 - Gtf2i protein_coding processed_transcript MGP_LPJ_T0074577.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139116396 139122937 - Gtf2i protein_coding processed_transcript MGP_LPJ_T0074578.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139120854 139132192 - Gtf2i protein_coding processed_transcript MGP_LPJ_T0074579.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139143848 139173105 - MGP_LPJ_P0074579 Gtf2i protein_coding protein_coding MGP_LPJ_T0074580.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139143879 139169775 - MGP_LPJ_P0074580 Gtf2i protein_coding nonsense_mediated_decay MGP_LPJ_T0074581.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139143879 139169483 - MGP_LPJ_P0074581 Gtf2i protein_coding protein_coding MGP_LPJ_T0074582.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139143905 139173306 - MGP_LPJ_P0074582 Gtf2i protein_coding protein_coding MGP_LPJ_T0074583.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139146153 139164365 - Gtf2i protein_coding retained_intron MGP_LPJ_T0074584.1 MGP_LPJ_G0030058.1 mouse_genomes_project 5 139151899 139154063 - Gtf2i protein_coding retained_intron MGP_LPJ_T0074913.1 MGP_LPJ_G0030117.1 mouse_genomes_project 5 142130565 142140326 + MGP_LPJ_P0074913 Plod3 protein_coding protein_coding MGP_LPJ_T0074914.1 MGP_LPJ_G0030117.1 mouse_genomes_project 5 142130924 142135644 + Plod3 protein_coding retained_intron MGP_LPJ_T0074915.1 MGP_LPJ_G0030117.1 mouse_genomes_project 5 142131022 142136384 + Plod3 protein_coding retained_intron MGP_LPJ_T0074916.1 MGP_LPJ_G0030117.1 mouse_genomes_project 5 142133861 142137858 + Plod3 protein_coding retained_intron MGP_LPJ_T0074917.1 MGP_LPJ_G0030117.1 mouse_genomes_project 5 142134057 142135644 + Plod3 protein_coding retained_intron MGP_LPJ_T0074918.1 MGP_LPJ_G0030117.1 mouse_genomes_project 5 142135179 142138856 + MGP_LPJ_P0074918 Plod3 protein_coding protein_coding MGP_LPJ_T0074094.1 MGP_LPJ_G0029978.1 mouse_genomes_project 5 127855309 127972783 - MGP_LPJ_P0074094 Clip1 protein_coding protein_coding MGP_LPJ_T0074095.1 MGP_LPJ_G0029978.1 mouse_genomes_project 5 127855309 127972487 - MGP_LPJ_P0074095 Clip1 protein_coding protein_coding MGP_LPJ_T0074096.1 MGP_LPJ_G0029978.1 mouse_genomes_project 5 127855321 127933464 - MGP_LPJ_P0074096 Clip1 protein_coding protein_coding MGP_LPJ_T0074097.1 MGP_LPJ_G0029978.1 mouse_genomes_project 5 127855321 127972437 - MGP_LPJ_P0074097 Clip1 protein_coding protein_coding MGP_LPJ_T0074098.1 MGP_LPJ_G0029978.1 mouse_genomes_project 5 127855332 127884878 - Clip1 protein_coding retained_intron MGP_LPJ_T0074099.1 MGP_LPJ_G0029978.1 mouse_genomes_project 5 127855381 127856068 - Clip1 protein_coding processed_transcript MGP_LPJ_T0074100.1 MGP_LPJ_G0029978.1 mouse_genomes_project 5 127856343 127972490 - MGP_LPJ_P0074100 Clip1 protein_coding protein_coding MGP_LPJ_T0074101.1 MGP_LPJ_G0029978.1 mouse_genomes_project 5 127856584 127893232 - Clip1 protein_coding retained_intron MGP_LPJ_T0074102.1 MGP_LPJ_G0029978.1 mouse_genomes_project 5 127856754 127944569 - MGP_LPJ_P0074102 Clip1 protein_coding protein_coding MGP_LPJ_T0074103.1 MGP_LPJ_G0029978.1 mouse_genomes_project 5 127856961 127898882 - MGP_LPJ_P0074103 Clip1 protein_coding protein_coding MGP_LPJ_T0074104.1 MGP_LPJ_G0029978.1 mouse_genomes_project 5 127866601 127898523 - Clip1 protein_coding retained_intron MGP_LPJ_T0074105.1 MGP_LPJ_G0029978.1 mouse_genomes_project 5 127870493 127884787 - Clip1 protein_coding retained_intron MGP_LPJ_T0074106.1 MGP_LPJ_G0029978.1 mouse_genomes_project 5 127898716 127944459 - MGP_LPJ_P0074106 Clip1 protein_coding nonsense_mediated_decay MGP_LPJ_T0074107.1 MGP_LPJ_G0029978.1 mouse_genomes_project 5 127898765 127955155 - MGP_LPJ_P0074107 Clip1 protein_coding protein_coding MGP_LPJ_T0074108.1 MGP_LPJ_G0029978.1 mouse_genomes_project 5 127916651 127919341 - Clip1 protein_coding retained_intron MGP_LPJ_T0099599.1 MGP_LPJ_G0037862.1 mouse_genomes_project 5 101975687 101975786 - Gm22838 snRNA snRNA MGP_LPJ_T0004882.1 MGP_LPJ_G0004200.1 mouse_genomes_project 5 140070804 140071688 - Gm43500 antisense antisense MGP_LPJ_T0069775.1 MGP_LPJ_G0029163.1 mouse_genomes_project 5 449766 489934 + MGP_LPJ_P0069775 Pex1 protein_coding protein_coding MGP_LPJ_T0069776.1 MGP_LPJ_G0029163.1 mouse_genomes_project 5 449766 489936 + MGP_LPJ_P0069776 Pex1 protein_coding protein_coding MGP_LPJ_T0069777.1 MGP_LPJ_G0029163.1 mouse_genomes_project 5 449899 459205 + MGP_LPJ_P0069777 Pex1 protein_coding protein_coding MGP_LPJ_T0069778.1 MGP_LPJ_G0029163.1 mouse_genomes_project 5 450071 475529 + MGP_LPJ_P0069778 Pex1 protein_coding protein_coding MGP_LPJ_T0069779.1 MGP_LPJ_G0029163.1 mouse_genomes_project 5 458164 459464 + Pex1 protein_coding retained_intron MGP_LPJ_T0069780.1 MGP_LPJ_G0029163.1 mouse_genomes_project 5 459544 472208 + MGP_LPJ_P0069780 Pex1 protein_coding protein_coding MGP_LPJ_T0069781.1 MGP_LPJ_G0029163.1 mouse_genomes_project 5 462961 469614 + Pex1 protein_coding retained_intron MGP_LPJ_T0069782.1 MGP_LPJ_G0029163.1 mouse_genomes_project 5 470394 476002 + MGP_LPJ_P0069782 Pex1 protein_coding nonsense_mediated_decay MGP_LPJ_T0069783.1 MGP_LPJ_G0029163.1 mouse_genomes_project 5 471267 472254 + Pex1 protein_coding retained_intron MGP_LPJ_T0069784.1 MGP_LPJ_G0029163.1 mouse_genomes_project 5 475563 475966 + Pex1 protein_coding retained_intron MGP_LPJ_T0069785.1 MGP_LPJ_G0029163.1 mouse_genomes_project 5 478701 479339 + Pex1 protein_coding retained_intron MGP_LPJ_T0069787.1 MGP_LPJ_G0029163.1 mouse_genomes_project 5 487874 488615 + Pex1 protein_coding retained_intron MGP_LPJ_T0069788.1 MGP_LPJ_G0029163.1 mouse_genomes_project 5 488318 489665 + Pex1 protein_coding retained_intron MGP_LPJ_T0069789.1 MGP_LPJ_G0029163.1 mouse_genomes_project 5 488854 489522 + Pex1 protein_coding retained_intron MGP_LPJ_T0008187.1 MGP_LPJ_G0006673.1 mouse_genomes_project 5 75952706 75967156 - Gm42800 lincRNA lincRNA MGP_LPJ_T0010710.1 MGP_LPJ_G0008828.1 mouse_genomes_project 5 77945656 77945738 + Mir5098 miRNA miRNA MGP_LPJ_T0001549.1 MGP_LPJ_G0001463.1 mouse_genomes_project 5 40294081 40295748 + TEC TEC MGP_LPJ_T0010684.1 MGP_LPJ_G0008802.1 mouse_genomes_project 5 6544986 6545062 + Mir879 miRNA miRNA MGP_LPJ_T0001772.1 MGP_LPJ_G0001684.1 mouse_genomes_project 5 108395695 108397957 + TEC TEC MGP_LPJ_T0102179.1 MGP_LPJ_G0040216.1 mouse_genomes_project 5 88268682 88284856 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0072722.1 MGP_LPJ_G0029706.1 mouse_genomes_project 5 106182364 106207050 - MGP_LPJ_P0072722 Hsd17b13 protein_coding protein_coding MGP_LPJ_T0072723.1 MGP_LPJ_G0029706.1 mouse_genomes_project 5 106192065 106207012 - MGP_LPJ_P0072723 Hsd17b13 protein_coding protein_coding MGP_LPJ_T0072724.1 MGP_LPJ_G0029706.1 mouse_genomes_project 5 106192065 106207096 - MGP_LPJ_P0072724 Hsd17b13 protein_coding protein_coding MGP_LPJ_T0072655.1 MGP_LPJ_G0029694.1 mouse_genomes_project 5 102928508 102945276 - MGP_LPJ_P0072655 Fam175a protein_coding nonsense_mediated_decay MGP_LPJ_T0072656.1 MGP_LPJ_G0029694.1 mouse_genomes_project 5 102928508 102945301 - MGP_LPJ_P0072656 Fam175a protein_coding protein_coding MGP_LPJ_T0072657.1 MGP_LPJ_G0029694.1 mouse_genomes_project 5 102928508 102945279 - MGP_LPJ_P0072657 Fam175a protein_coding nonsense_mediated_decay MGP_LPJ_T0072658.1 MGP_LPJ_G0029694.1 mouse_genomes_project 5 102928508 102945276 - MGP_LPJ_P0072658 Fam175a protein_coding nonsense_mediated_decay MGP_LPJ_T0072659.1 MGP_LPJ_G0029694.1 mouse_genomes_project 5 102928519 102945276 - MGP_LPJ_P0072659 Fam175a protein_coding protein_coding MGP_LPJ_T0072660.1 MGP_LPJ_G0029694.1 mouse_genomes_project 5 102929641 102930631 - Fam175a protein_coding retained_intron MGP_LPJ_T0072661.1 MGP_LPJ_G0029694.1 mouse_genomes_project 5 102934132 102945277 - MGP_LPJ_P0072661 Fam175a protein_coding nonsense_mediated_decay MGP_LPJ_T0072662.1 MGP_LPJ_G0029694.1 mouse_genomes_project 5 102942090 102945283 - Fam175a protein_coding retained_intron MGP_LPJ_T0072663.1 MGP_LPJ_G0029694.1 mouse_genomes_project 5 102942695 102945276 - Fam175a protein_coding retained_intron MGP_LPJ_T0001512.1 MGP_LPJ_G0001428.1 mouse_genomes_project 5 26374815 26379168 - TEC TEC MGP_LPJ_T0075116.1 MGP_LPJ_G0030159.1 mouse_genomes_project 5 143491255 143495187 + MGP_LPJ_P0075116 Cops6 protein_coding protein_coding MGP_LPJ_T0075117.1 MGP_LPJ_G0030159.1 mouse_genomes_project 5 143491284 143494163 + MGP_LPJ_P0075117 Cops6 protein_coding protein_coding MGP_LPJ_T0075118.1 MGP_LPJ_G0030159.1 mouse_genomes_project 5 143491293 143492569 + Cops6 protein_coding retained_intron MGP_LPJ_T0075119.1 MGP_LPJ_G0030159.1 mouse_genomes_project 5 143491353 143494324 + Cops6 protein_coding retained_intron MGP_LPJ_T0075120.1 MGP_LPJ_G0030159.1 mouse_genomes_project 5 143492961 143494104 + MGP_LPJ_P0075120 Cops6 protein_coding protein_coding MGP_LPJ_T0072339.1 MGP_LPJ_G0029623.1 mouse_genomes_project 5 91951667 91969586 + MGP_LPJ_P0072339 Afp protein_coding protein_coding MGP_LPJ_T0072340.1 MGP_LPJ_G0029623.1 mouse_genomes_project 5 91951669 91956731 + MGP_LPJ_P0072340 Afp protein_coding protein_coding MGP_LPJ_T0072341.1 MGP_LPJ_G0029623.1 mouse_genomes_project 5 91951915 91956781 + Afp protein_coding retained_intron MGP_LPJ_T0072342.1 MGP_LPJ_G0029623.1 mouse_genomes_project 5 91962208 91964847 + Afp protein_coding retained_intron MGP_LPJ_T0072343.1 MGP_LPJ_G0029623.1 mouse_genomes_project 5 91968108 91969530 + Afp protein_coding retained_intron MGP_LPJ_T0074047.1 MGP_LPJ_G0029969.1 mouse_genomes_project 5 127395677 127406584 - MGP_LPJ_P0074047 Hpd protein_coding protein_coding MGP_LPJ_T0074048.1 MGP_LPJ_G0029969.1 mouse_genomes_project 5 127395742 127396780 - Hpd protein_coding processed_transcript MGP_LPJ_T0074049.1 MGP_LPJ_G0029969.1 mouse_genomes_project 5 127395971 127399775 - MGP_LPJ_P0074049 Hpd protein_coding protein_coding MGP_LPJ_T0074050.1 MGP_LPJ_G0029969.1 mouse_genomes_project 5 127401388 127406579 - Hpd protein_coding retained_intron MGP_LPJ_T0074051.1 MGP_LPJ_G0029969.1 mouse_genomes_project 5 127401388 127406580 - MGP_LPJ_P0074051 Hpd protein_coding protein_coding MGP_LPJ_T0074052.1 MGP_LPJ_G0029969.1 mouse_genomes_project 5 127404515 127405924 - Hpd protein_coding processed_transcript MGP_LPJ_T0070477.1 MGP_LPJ_G0029291.1 mouse_genomes_project 5 28884625 28948755 - MGP_LPJ_P0070477 Cib4 protein_coding protein_coding MGP_LPJ_T0074293.1 MGP_LPJ_G0030007.1 mouse_genomes_project 5 129148161 129175936 - MGP_LPJ_P0074293 Ccdc92 protein_coding protein_coding MGP_LPJ_T0074294.1 MGP_LPJ_G0030007.1 mouse_genomes_project 5 129149636 129175397 - MGP_LPJ_P0074294 Ccdc92 protein_coding nonsense_mediated_decay MGP_LPJ_T0074295.1 MGP_LPJ_G0030007.1 mouse_genomes_project 5 129149812 129165094 - MGP_LPJ_P0074295 Ccdc92 protein_coding protein_coding MGP_LPJ_T0100819.1 MGP_LPJ_G0039082.1 mouse_genomes_project 5 16732043 16732171 + Gm23822 snoRNA snoRNA MGP_LPJ_T0073195.1 MGP_LPJ_G0029813.1 mouse_genomes_project 5 116091197 116204767 - MGP_LPJ_P0073195 Adrbk2 protein_coding protein_coding MGP_LPJ_T0073196.1 MGP_LPJ_G0029813.1 mouse_genomes_project 5 116093314 116204767 - MGP_LPJ_P0073196 Adrbk2 protein_coding nonsense_mediated_decay MGP_LPJ_T0073197.1 MGP_LPJ_G0029813.1 mouse_genomes_project 5 116096819 116105405 - Adrbk2 protein_coding retained_intron MGP_LPJ_T0073198.1 MGP_LPJ_G0029813.1 mouse_genomes_project 5 116098454 116205044 - MGP_LPJ_P0073198 Adrbk2 protein_coding protein_coding MGP_LPJ_T0073199.1 MGP_LPJ_G0029813.1 mouse_genomes_project 5 116100771 116106875 - Adrbk2 protein_coding retained_intron MGP_LPJ_T0073200.1 MGP_LPJ_G0029813.1 mouse_genomes_project 5 116142811 116204756 - MGP_LPJ_P0073200 Adrbk2 protein_coding protein_coding MGP_LPJ_T0072430.1 MGP_LPJ_G0029649.1 mouse_genomes_project 5 93870394 93877053 - MGP_LPJ_P0072430 Cxcl9 protein_coding protein_coding MGP_LPJ_T0072431.1 MGP_LPJ_G0029649.1 mouse_genomes_project 5 93875596 93877052 - Cxcl9 protein_coding retained_intron MGP_LPJ_T0100865.1 MGP_LPJ_G0039128.1 mouse_genomes_project 5 153140198 153140328 + Gm23202 snoRNA snoRNA MGP_LPJ_T0071512.1 MGP_LPJ_G0029455.1 mouse_genomes_project 5 53220172 53227774 - MGP_LPJ_P0071512 Cckar protein_coding protein_coding MGP_LPJ_T0071513.1 MGP_LPJ_G0029455.1 mouse_genomes_project 5 53226761 53227977 - Cckar protein_coding processed_transcript MGP_LPJ_T0001505.1 MGP_LPJ_G0001422.1 mouse_genomes_project 5 22269790 22272381 + TEC TEC MGP_LPJ_T0070382.1 MGP_LPJ_G0029272.1 mouse_genomes_project 5 26819012 26829433 - MGP_LPJ_P0070382 Shh protein_coding protein_coding MGP_LPJ_T0071933.1 MGP_LPJ_G0029529.1 mouse_genomes_project 5 74110443 74138556 + MGP_LPJ_P0071933 Spata18 protein_coding protein_coding MGP_LPJ_T0071934.1 MGP_LPJ_G0029529.1 mouse_genomes_project 5 74110446 74134467 + MGP_LPJ_P0071934 Spata18 protein_coding non_stop_decay MGP_LPJ_T0071935.1 MGP_LPJ_G0029529.1 mouse_genomes_project 5 74116564 74138526 + MGP_LPJ_P0071935 Spata18 protein_coding protein_coding MGP_LPJ_T0071936.1 MGP_LPJ_G0029529.1 mouse_genomes_project 5 74118296 74138528 + MGP_LPJ_P0071936 Spata18 protein_coding protein_coding MGP_LPJ_T0098612.1 MGP_LPJ_G0036886.1 mouse_genomes_project 5 1843461 1845380 - Gm43111 sense_intronic sense_intronic MGP_LPJ_T0001487.1 MGP_LPJ_G0001404.1 mouse_genomes_project 5 12192797 12196837 + TEC TEC MGP_LPJ_T0008162.1 MGP_LPJ_G0006655.1 mouse_genomes_project 5 64506646 64519801 - 1700027F09Rik lincRNA lincRNA MGP_LPJ_T0071152.1 MGP_LPJ_G0029393.1 mouse_genomes_project 5 35527985 35529258 - MGP_LPJ_P0071152 Bloc1s4 protein_coding protein_coding MGP_LPJ_T0102201.1 MGP_LPJ_G0040238.1 mouse_genomes_project 5 151944887 151990453 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0004817.1 MGP_LPJ_G0004154.1 mouse_genomes_project 5 119621355 119626941 + C330018A13Rik antisense antisense MGP_LPJ_T0075380.1 MGP_LPJ_G0030213.1 mouse_genomes_project 5 148251369 148270793 + MGP_LPJ_P0075380 Foxk1 protein_coding protein_coding MGP_LPJ_T0075381.1 MGP_LPJ_G0030213.1 mouse_genomes_project 5 148251372 148314377 + MGP_LPJ_P0075381 Foxk1 protein_coding protein_coding MGP_LPJ_T0008191.1 MGP_LPJ_G0006676.1 mouse_genomes_project 5 76420944 76423473 - Gm19590 lincRNA lincRNA MGP_LPJ_T0014849.1 MGP_LPJ_G0012940.1 mouse_genomes_project 5 21406348 21406472 + processed_pseudogene processed_pseudogene MGP_LPJ_T0074696.1 MGP_LPJ_G0030077.1 mouse_genomes_project 5 140036407 140070181 + Mlxipl protein_coding processed_transcript MGP_LPJ_T0074697.1 MGP_LPJ_G0030077.1 mouse_genomes_project 5 140055305 140071437 + Mlxipl protein_coding retained_intron MGP_LPJ_T0074698.1 MGP_LPJ_G0030077.1 mouse_genomes_project 5 140055316 140072088 + MGP_LPJ_P0074698 Mlxipl protein_coding protein_coding MGP_LPJ_T0074699.1 MGP_LPJ_G0030077.1 mouse_genomes_project 5 140055318 140086260 + MGP_LPJ_P0074699 Mlxipl protein_coding nonsense_mediated_decay MGP_LPJ_T0074700.1 MGP_LPJ_G0030077.1 mouse_genomes_project 5 140055327 140086260 + MGP_LPJ_P0074700 Mlxipl protein_coding nonsense_mediated_decay MGP_LPJ_T0074701.1 MGP_LPJ_G0030077.1 mouse_genomes_project 5 140055327 140086260 + MGP_LPJ_P0074701 Mlxipl protein_coding nonsense_mediated_decay MGP_LPJ_T0074702.1 MGP_LPJ_G0030077.1 mouse_genomes_project 5 140055327 140086260 + MGP_LPJ_P0074702 Mlxipl protein_coding nonsense_mediated_decay MGP_LPJ_T0074703.1 MGP_LPJ_G0030077.1 mouse_genomes_project 5 140055332 140086720 + MGP_LPJ_P0074703 Mlxipl protein_coding protein_coding MGP_LPJ_T0074704.1 MGP_LPJ_G0030077.1 mouse_genomes_project 5 140081947 140082948 + MGP_LPJ_P0074704 Mlxipl protein_coding protein_coding MGP_LPJ_T0074705.1 MGP_LPJ_G0030077.1 mouse_genomes_project 5 140081968 140084076 + MGP_LPJ_P0074705 Mlxipl protein_coding protein_coding MGP_LPJ_T0008429.1 MGP_LPJ_G0006835.1 mouse_genomes_project 5 142336715 142350804 - lincRNA lincRNA MGP_LPJ_T0101354.1 MGP_LPJ_G0039557.1 mouse_genomes_project 5 56007717 56097269 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0010735.1 MGP_LPJ_G0008853.1 mouse_genomes_project 5 128314480 128314559 + Mir7032 miRNA miRNA MGP_LPJ_T0100835.1 MGP_LPJ_G0039098.1 mouse_genomes_project 5 64039429 64039561 - Gm25608 snoRNA snoRNA MGP_LPJ_T0072088.1 MGP_LPJ_G0029556.1 mouse_genomes_project 5 77874966 77882450 - MGP_LPJ_P0072088 Spink2 protein_coding protein_coding MGP_LPJ_T0072089.1 MGP_LPJ_G0029556.1 mouse_genomes_project 5 77874966 77882417 - MGP_LPJ_P0072089 Spink2 protein_coding protein_coding MGP_LPJ_T0072090.1 MGP_LPJ_G0029556.1 mouse_genomes_project 5 77874971 77882184 - MGP_LPJ_P0072090 Spink2 protein_coding protein_coding MGP_LPJ_T0075146.1 MGP_LPJ_G0030163.1 mouse_genomes_project 5 143523417 143529838 + MGP_LPJ_P0075146 Cnpy4 protein_coding protein_coding MGP_LPJ_T0075147.1 MGP_LPJ_G0030163.1 mouse_genomes_project 5 143525835 143528517 + MGP_LPJ_P0075147 Cnpy4 protein_coding protein_coding MGP_LPJ_T0075148.1 MGP_LPJ_G0030163.1 mouse_genomes_project 5 143526030 143528070 + Cnpy4 protein_coding retained_intron MGP_LPJ_T0008484.1 MGP_LPJ_G0006878.1 mouse_genomes_project 5 156185722 156193137 + Gm43153 lincRNA lincRNA MGP_LPJ_T0071197.1 MGP_LPJ_G0029401.1 mouse_genomes_project 5 36156184 36249018 + MGP_LPJ_P0071197 Evc2 protein_coding protein_coding MGP_LPJ_T0071198.1 MGP_LPJ_G0029401.1 mouse_genomes_project 5 36156293 36211471 + Evc2 protein_coding retained_intron MGP_LPJ_T0071199.1 MGP_LPJ_G0029401.1 mouse_genomes_project 5 36213588 36215707 + Evc2 protein_coding processed_transcript MGP_LPJ_T0071200.1 MGP_LPJ_G0029401.1 mouse_genomes_project 5 36239783 36241840 + Evc2 protein_coding retained_intron MGP_LPJ_T0001746.1 MGP_LPJ_G0001658.1 mouse_genomes_project 5 94770528 94772432 - TEC TEC MGP_LPJ_T0008320.1 MGP_LPJ_G0006765.1 mouse_genomes_project 5 115837890 115843416 + Gm42865 lincRNA lincRNA MGP_LPJ_T0015026.1 MGP_LPJ_G0013117.1 mouse_genomes_project 5 94782507 94782889 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014830.1 MGP_LPJ_G0012921.1 mouse_genomes_project 5 18743507 18743878 + processed_pseudogene processed_pseudogene MGP_LPJ_T0069838.1 MGP_LPJ_G0029173.1 mouse_genomes_project 5 1714730 1718928 - MGP_LPJ_P0069838 Fzd1 protein_coding protein_coding MGP_LPJ_T0015032.1 MGP_LPJ_G0013123.1 mouse_genomes_project 5 100429160 100429541 + processed_pseudogene processed_pseudogene MGP_LPJ_T0070412.1 MGP_LPJ_G0029279.1 mouse_genomes_project 5 28119888 28173327 + MGP_LPJ_P0070412 Dnajb6 protein_coding protein_coding MGP_LPJ_T0070413.1 MGP_LPJ_G0029279.1 mouse_genomes_project 5 28120140 28152212 + MGP_LPJ_P0070413 Dnajb6 protein_coding protein_coding MGP_LPJ_T0070414.1 MGP_LPJ_G0029279.1 mouse_genomes_project 5 28120195 28142892 + MGP_LPJ_P0070414 Dnajb6 protein_coding protein_coding MGP_LPJ_T0070415.1 MGP_LPJ_G0029279.1 mouse_genomes_project 5 28120224 28123303 + Dnajb6 protein_coding processed_transcript MGP_LPJ_T0070416.1 MGP_LPJ_G0029279.1 mouse_genomes_project 5 28120233 28206663 + MGP_LPJ_P0070416 Dnajb6 protein_coding protein_coding MGP_LPJ_T0070417.1 MGP_LPJ_G0029279.1 mouse_genomes_project 5 28121471 28132723 + MGP_LPJ_P0070417 Dnajb6 protein_coding protein_coding MGP_LPJ_T0070418.1 MGP_LPJ_G0029279.1 mouse_genomes_project 5 28135647 28137664 + Dnajb6 protein_coding retained_intron MGP_LPJ_T0070419.1 MGP_LPJ_G0029279.1 mouse_genomes_project 5 28139265 28142883 + Dnajb6 protein_coding processed_transcript MGP_LPJ_T0070420.1 MGP_LPJ_G0029279.1 mouse_genomes_project 5 28149108 28150553 + Dnajb6 protein_coding retained_intron MGP_LPJ_T0070421.1 MGP_LPJ_G0029279.1 mouse_genomes_project 5 28150115 28151613 + Dnajb6 protein_coding retained_intron MGP_LPJ_T0071322.1 MGP_LPJ_G0029426.1 mouse_genomes_project 5 42970796 43014490 + MGP_LPJ_P0071322 Cd38 protein_coding protein_coding MGP_LPJ_T0071323.1 MGP_LPJ_G0029426.1 mouse_genomes_project 5 42971103 42971984 + Cd38 protein_coding retained_intron MGP_LPJ_T0072993.1 MGP_LPJ_G0029769.1 mouse_genomes_project 5 111607565 111622045 - MGP_LPJ_P0072993 Vmn2r11 protein_coding protein_coding MGP_LPJ_T0074851.1 MGP_LPJ_G0030107.1 mouse_genomes_project 5 141199806 141225723 - MGP_LPJ_P0074851 Orai2 protein_coding protein_coding MGP_LPJ_T0074852.1 MGP_LPJ_G0030107.1 mouse_genomes_project 5 141199811 141225638 - MGP_LPJ_P0074852 Orai2 protein_coding protein_coding MGP_LPJ_T0074853.1 MGP_LPJ_G0030107.1 mouse_genomes_project 5 141203051 141225644 - MGP_LPJ_P0074853 Orai2 protein_coding protein_coding MGP_LPJ_T0074854.1 MGP_LPJ_G0030107.1 mouse_genomes_project 5 141221152 141225643 - Orai2 protein_coding retained_intron MGP_LPJ_T0008151.1 MGP_LPJ_G0006645.1 mouse_genomes_project 5 52871846 52884786 - Gm42745 lincRNA lincRNA MGP_LPJ_T0100836.1 MGP_LPJ_G0039099.1 mouse_genomes_project 5 64178549 64178683 + Gm22559 snoRNA snoRNA MGP_LPJ_T0001811.1 MGP_LPJ_G0001723.1 mouse_genomes_project 5 120700603 120703225 + TEC TEC MGP_LPJ_T0099629.1 MGP_LPJ_G0037892.1 mouse_genomes_project 5 149934008 149934112 + Gm24311 snRNA snRNA MGP_LPJ_T0004687.1 MGP_LPJ_G0004059.1 mouse_genomes_project 5 32806023 32807024 + Gm42846 antisense antisense MGP_LPJ_T0101358.1 MGP_LPJ_G0039561.1 mouse_genomes_project 5 73814787 73815651 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101359.1 MGP_LPJ_G0039561.1 mouse_genomes_project 5 73814832 73828707 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101360.1 MGP_LPJ_G0039561.1 mouse_genomes_project 5 73828530 73828984 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0010724.1 MGP_LPJ_G0008842.1 mouse_genomes_project 5 116543231 116543284 - Mir7229 miRNA miRNA MGP_LPJ_T0074280.1 MGP_LPJ_G0030005.1 mouse_genomes_project 5 128996585 129006930 + Atp6v0a2 protein_coding processed_transcript MGP_LPJ_T0074281.1 MGP_LPJ_G0030005.1 mouse_genomes_project 5 128997061 129030982 + MGP_LPJ_P0074281 Atp6v0a2 protein_coding protein_coding MGP_LPJ_T0074282.1 MGP_LPJ_G0030005.1 mouse_genomes_project 5 128997108 129028667 + MGP_LPJ_P0074282 Atp6v0a2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074283.1 MGP_LPJ_G0030005.1 mouse_genomes_project 5 128997212 129010949 + Atp6v0a2 protein_coding retained_intron MGP_LPJ_T0074284.1 MGP_LPJ_G0030005.1 mouse_genomes_project 5 129020827 129024426 + Atp6v0a2 protein_coding processed_transcript MGP_LPJ_T0074285.1 MGP_LPJ_G0030005.1 mouse_genomes_project 5 129022394 129030128 + Atp6v0a2 protein_coding retained_intron MGP_LPJ_T0074286.1 MGP_LPJ_G0030005.1 mouse_genomes_project 5 129024729 129028344 + MGP_LPJ_P0074286 Atp6v0a2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074878.1 MGP_LPJ_G0030111.1 mouse_genomes_project 5 141791025 141800432 + MGP_LPJ_P0074878 Myl10 protein_coding protein_coding MGP_LPJ_T0074879.1 MGP_LPJ_G0030111.1 mouse_genomes_project 5 141791057 141800330 + MGP_LPJ_P0074879 Myl10 protein_coding protein_coding MGP_LPJ_T0074880.1 MGP_LPJ_G0030111.1 mouse_genomes_project 5 141791584 141800432 + MGP_LPJ_P0074880 Myl10 protein_coding protein_coding MGP_LPJ_T0074881.1 MGP_LPJ_G0030111.1 mouse_genomes_project 5 141792056 141800432 + MGP_LPJ_P0074881 Myl10 protein_coding protein_coding MGP_LPJ_T0074882.1 MGP_LPJ_G0030111.1 mouse_genomes_project 5 141797218 141800432 + Myl10 protein_coding retained_intron MGP_LPJ_T0074883.1 MGP_LPJ_G0030111.1 mouse_genomes_project 5 141797269 141800430 + Myl10 protein_coding retained_intron MGP_LPJ_T0004705.1 MGP_LPJ_G0004073.1 mouse_genomes_project 5 43011337 43012008 - Gm16015 antisense antisense MGP_LPJ_T0100851.1 MGP_LPJ_G0039114.1 mouse_genomes_project 5 101921151 101921227 + Gm26252 snoRNA snoRNA MGP_LPJ_T0074417.1 MGP_LPJ_G0030032.1 mouse_genomes_project 5 134336874 134343934 + MGP_LPJ_P0074417 Mrps17 protein_coding protein_coding MGP_LPJ_T0074418.1 MGP_LPJ_G0030032.1 mouse_genomes_project 5 134336880 134339862 + MGP_LPJ_P0074418 Mrps17 protein_coding protein_coding MGP_LPJ_T0074419.1 MGP_LPJ_G0030032.1 mouse_genomes_project 5 134336881 134339779 + MGP_LPJ_P0074419 Mrps17 protein_coding protein_coding MGP_LPJ_T0074420.1 MGP_LPJ_G0030032.1 mouse_genomes_project 5 134336886 134339401 + MGP_LPJ_P0074420 Mrps17 protein_coding protein_coding MGP_LPJ_T0074421.1 MGP_LPJ_G0030032.1 mouse_genomes_project 5 134336888 134340258 + MGP_LPJ_P0074421 Mrps17 protein_coding protein_coding MGP_LPJ_T0074422.1 MGP_LPJ_G0030032.1 mouse_genomes_project 5 134336893 134340075 + MGP_LPJ_P0074422 Mrps17 protein_coding protein_coding MGP_LPJ_T0074423.1 MGP_LPJ_G0030032.1 mouse_genomes_project 5 134336895 134338723 + Mrps17 protein_coding retained_intron MGP_LPJ_T0074424.1 MGP_LPJ_G0030032.1 mouse_genomes_project 5 134336911 134339436 + MGP_LPJ_P0074424 Mrps17 protein_coding protein_coding MGP_LPJ_T0074425.1 MGP_LPJ_G0030032.1 mouse_genomes_project 5 134336935 134339672 + MGP_LPJ_P0074425 Mrps17 protein_coding protein_coding MGP_LPJ_T0074426.1 MGP_LPJ_G0030032.1 mouse_genomes_project 5 134336954 134339829 + MGP_LPJ_P0074426 Mrps17 protein_coding protein_coding MGP_LPJ_T0074427.1 MGP_LPJ_G0030032.1 mouse_genomes_project 5 134337074 134338211 + MGP_LPJ_P0074427 Mrps17 protein_coding protein_coding MGP_LPJ_T0073735.1 MGP_LPJ_G0029918.1 mouse_genomes_project 5 124733061 124749702 + MGP_LPJ_P0073735 Oas1f protein_coding protein_coding MGP_LPJ_T0073736.1 MGP_LPJ_G0029918.1 mouse_genomes_project 5 124734064 124749578 + MGP_LPJ_P0073736 Oas1f protein_coding nonsense_mediated_decay MGP_LPJ_T0071610.1 MGP_LPJ_G0029476.1 mouse_genomes_project 5 65513890 65533800 - MGP_LPJ_P0071610 Rpl9 protein_coding protein_coding MGP_LPJ_T0071611.1 MGP_LPJ_G0029476.1 mouse_genomes_project 5 65513897 65533372 - MGP_LPJ_P0071611 Rpl9 protein_coding protein_coding MGP_LPJ_T0071612.1 MGP_LPJ_G0029476.1 mouse_genomes_project 5 65513897 65533200 - MGP_LPJ_P0071612 Rpl9 protein_coding nonsense_mediated_decay MGP_LPJ_T0071613.1 MGP_LPJ_G0029476.1 mouse_genomes_project 5 65513897 65533766 - MGP_LPJ_P0071613 Rpl9 protein_coding protein_coding MGP_LPJ_T0071614.1 MGP_LPJ_G0029476.1 mouse_genomes_project 5 65513898 65533765 - Rpl9 protein_coding retained_intron MGP_LPJ_T0071615.1 MGP_LPJ_G0029476.1 mouse_genomes_project 5 65514090 65533748 - Rpl9 protein_coding retained_intron MGP_LPJ_T0071616.1 MGP_LPJ_G0029476.1 mouse_genomes_project 5 65514330 65533358 - Rpl9 protein_coding retained_intron MGP_LPJ_T0071617.1 MGP_LPJ_G0029476.1 mouse_genomes_project 5 65528954 65529505 - Rpl9 protein_coding retained_intron MGP_LPJ_T0099583.1 MGP_LPJ_G0037846.1 mouse_genomes_project 5 72704775 72704873 - Gm25768 snRNA snRNA MGP_LPJ_T0075582.1 MGP_LPJ_G0030256.1 mouse_genomes_project 5 150849660 150859622 - Smurf1 protein_coding retained_intron MGP_LPJ_T0075583.1 MGP_LPJ_G0030256.1 mouse_genomes_project 5 150849660 150944259 - MGP_LPJ_P0075583 Smurf1 protein_coding protein_coding MGP_LPJ_T0075584.1 MGP_LPJ_G0030256.1 mouse_genomes_project 5 150849667 150944267 - MGP_LPJ_P0075584 Smurf1 protein_coding protein_coding MGP_LPJ_T0075585.1 MGP_LPJ_G0030256.1 mouse_genomes_project 5 150852275 150944267 - MGP_LPJ_P0075585 Smurf1 protein_coding protein_coding MGP_LPJ_T0075586.1 MGP_LPJ_G0030256.1 mouse_genomes_project 5 150857746 150871925 - MGP_LPJ_P0075586 Smurf1 protein_coding protein_coding MGP_LPJ_T0073664.1 MGP_LPJ_G0029901.1 mouse_genomes_project 5 123905289 123992345 + MGP_LPJ_P0073664 Rbm19 protein_coding protein_coding MGP_LPJ_T0073665.1 MGP_LPJ_G0029901.1 mouse_genomes_project 5 123905341 123907806 + Rbm19 protein_coding retained_intron MGP_LPJ_T0073666.1 MGP_LPJ_G0029901.1 mouse_genomes_project 5 123905344 123992343 + MGP_LPJ_P0073666 Rbm19 protein_coding nonsense_mediated_decay MGP_LPJ_T0073667.1 MGP_LPJ_G0029901.1 mouse_genomes_project 5 123907420 123909118 + Rbm19 protein_coding retained_intron MGP_LPJ_T0073668.1 MGP_LPJ_G0029901.1 mouse_genomes_project 5 123948464 123992335 + Rbm19 protein_coding processed_transcript MGP_LPJ_T0073669.1 MGP_LPJ_G0029901.1 mouse_genomes_project 5 123954354 123991557 + Rbm19 protein_coding processed_transcript MGP_LPJ_T0073670.1 MGP_LPJ_G0029901.1 mouse_genomes_project 5 123959997 123979604 + Rbm19 protein_coding processed_transcript MGP_LPJ_T0073671.1 MGP_LPJ_G0029901.1 mouse_genomes_project 5 123961591 123992341 + Rbm19 protein_coding processed_transcript MGP_LPJ_T0073672.1 MGP_LPJ_G0029901.1 mouse_genomes_project 5 123964780 123991354 + Rbm19 protein_coding processed_transcript MGP_LPJ_T0073673.1 MGP_LPJ_G0029901.1 mouse_genomes_project 5 123967405 123991333 + Rbm19 protein_coding processed_transcript MGP_LPJ_T0069857.1 MGP_LPJ_G0029176.1 mouse_genomes_project 5 2486656 2518578 - Cldn12 protein_coding processed_transcript MGP_LPJ_T0069858.1 MGP_LPJ_G0029176.1 mouse_genomes_project 5 2508714 2518455 - MGP_LPJ_P0069858 Cldn12 protein_coding protein_coding MGP_LPJ_T0069859.1 MGP_LPJ_G0029176.1 mouse_genomes_project 5 2508808 2518539 - MGP_LPJ_P0069859 Cldn12 protein_coding protein_coding MGP_LPJ_T0069860.1 MGP_LPJ_G0029176.1 mouse_genomes_project 5 2508810 2518491 - MGP_LPJ_P0069860 Cldn12 protein_coding protein_coding MGP_LPJ_T0069861.1 MGP_LPJ_G0029176.1 mouse_genomes_project 5 2508922 2518396 - MGP_LPJ_P0069861 Cldn12 protein_coding protein_coding MGP_LPJ_T0069862.1 MGP_LPJ_G0029176.1 mouse_genomes_project 5 2512107 2518455 - MGP_LPJ_P0069862 Cldn12 protein_coding protein_coding MGP_LPJ_T0069863.1 MGP_LPJ_G0029176.1 mouse_genomes_project 5 2514761 2518624 - Cldn12 protein_coding processed_transcript MGP_LPJ_T0069864.1 MGP_LPJ_G0029176.1 mouse_genomes_project 5 2516889 2518112 - Cldn12 protein_coding processed_transcript MGP_LPJ_T0074509.1 MGP_LPJ_G0030050.1 mouse_genomes_project 5 135026208 135032581 - A330070K13Rik protein_coding antisense MGP_LPJ_T0074510.1 MGP_LPJ_G0030050.1 mouse_genomes_project 5 135026281 135032582 - MGP_LPJ_P0074510 A330070K13Rik protein_coding protein_coding MGP_LPJ_T0100838.1 MGP_LPJ_G0039101.1 mouse_genomes_project 5 68838434 68838561 - Gm23605 snoRNA snoRNA MGP_LPJ_T0075073.1 MGP_LPJ_G0030147.1 mouse_genomes_project 5 143056213 143057127 + MGP_LPJ_P0075073 Ppp1r35 protein_coding protein_coding MGP_LPJ_T0075074.1 MGP_LPJ_G0030147.1 mouse_genomes_project 5 143056268 143057475 + MGP_LPJ_P0075074 Ppp1r35 protein_coding protein_coding MGP_LPJ_T0075075.1 MGP_LPJ_G0030147.1 mouse_genomes_project 5 143056801 143057471 + MGP_LPJ_P0075075 Ppp1r35 protein_coding protein_coding MGP_LPJ_T0075076.1 MGP_LPJ_G0030147.1 mouse_genomes_project 5 143056908 143057475 + Ppp1r35 protein_coding retained_intron MGP_LPJ_T0073830.1 MGP_LPJ_G0029939.1 mouse_genomes_project 5 125812299 125857039 + Atxn2 protein_coding processed_transcript MGP_LPJ_T0073832.1 MGP_LPJ_G0029939.1 mouse_genomes_project 5 125853471 125882115 + Atxn2 protein_coding processed_transcript MGP_LPJ_T0073833.1 MGP_LPJ_G0029939.1 mouse_genomes_project 5 125857051 125925570 + MGP_LPJ_P0073833 Atxn2 protein_coding protein_coding MGP_LPJ_T0073834.1 MGP_LPJ_G0029939.1 mouse_genomes_project 5 125887252 125904354 + MGP_LPJ_P0073834 Atxn2 protein_coding protein_coding MGP_LPJ_T0073835.1 MGP_LPJ_G0029939.1 mouse_genomes_project 5 125889493 125892681 + Atxn2 protein_coding retained_intron MGP_LPJ_T0073836.1 MGP_LPJ_G0029939.1 mouse_genomes_project 5 125893265 125925342 + MGP_LPJ_P0073836 Atxn2 protein_coding protein_coding MGP_LPJ_T0073837.1 MGP_LPJ_G0029939.1 mouse_genomes_project 5 125894432 125904765 + Atxn2 protein_coding retained_intron MGP_LPJ_T0073838.1 MGP_LPJ_G0029939.1 mouse_genomes_project 5 125906705 125914057 + Atxn2 protein_coding retained_intron MGP_LPJ_T0073839.1 MGP_LPJ_G0029939.1 mouse_genomes_project 5 125910599 125912887 + Atxn2 protein_coding processed_transcript MGP_LPJ_T0073840.1 MGP_LPJ_G0029939.1 mouse_genomes_project 5 125912367 125921573 + Atxn2 protein_coding retained_intron MGP_LPJ_T0073841.1 MGP_LPJ_G0029939.1 mouse_genomes_project 5 125912732 125919678 + Atxn2 protein_coding retained_intron MGP_LPJ_T0073842.1 MGP_LPJ_G0029939.1 mouse_genomes_project 5 125912851 125925253 + MGP_LPJ_P0073842 Atxn2 protein_coding protein_coding MGP_LPJ_T0073843.1 MGP_LPJ_G0029939.1 mouse_genomes_project 5 125916200 125925355 + Atxn2 protein_coding retained_intron MGP_LPJ_T0073844.1 MGP_LPJ_G0029939.1 mouse_genomes_project 5 125916866 125924077 + MGP_LPJ_P0073844 Atxn2 protein_coding nonsense_mediated_decay MGP_LPJ_T0073845.1 MGP_LPJ_G0029939.1 mouse_genomes_project 5 125921285 125922155 + Atxn2 protein_coding retained_intron MGP_LPJ_T0073846.1 MGP_LPJ_G0029939.1 mouse_genomes_project 5 125921586 125922552 + Atxn2 protein_coding retained_intron MGP_LPJ_T0073847.1 MGP_LPJ_G0029939.1 mouse_genomes_project 5 125922081 125927114 + MGP_LPJ_P0073847 Atxn2 protein_coding nonsense_mediated_decay MGP_LPJ_T0073848.1 MGP_LPJ_G0029939.1 mouse_genomes_project 5 125922128 125925519 + MGP_LPJ_P0073848 Atxn2 protein_coding protein_coding MGP_LPJ_T0075286.1 MGP_LPJ_G0030190.1 mouse_genomes_project 5 145146091 145151329 + MGP_LPJ_P0075286 Uncx protein_coding protein_coding MGP_LPJ_T0075287.1 MGP_LPJ_G0030190.1 mouse_genomes_project 5 145146495 145147866 + MGP_LPJ_P0075287 Uncx protein_coding protein_coding MGP_LPJ_T0008450.1 MGP_LPJ_G0006853.1 mouse_genomes_project 5 152429978 152436168 - B230303O12Rik lincRNA lincRNA MGP_LPJ_T0072263.1 MGP_LPJ_G0029599.1 mouse_genomes_project 5 89367346 89369452 + MGP_LPJ_P0072263 Cabs1 protein_coding protein_coding MGP_LPJ_T0014999.1 MGP_LPJ_G0013090.1 mouse_genomes_project 5 84378562 84379430 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008105.1 MGP_LPJ_G0006612.1 mouse_genomes_project 5 34064599 34070491 + 4930478P22Rik lincRNA lincRNA MGP_LPJ_T0008106.1 MGP_LPJ_G0006612.1 mouse_genomes_project 5 34064611 34070727 + 4930478P22Rik lincRNA lincRNA MGP_LPJ_T0008107.1 MGP_LPJ_G0006612.1 mouse_genomes_project 5 34064617 34069953 + 4930478P22Rik lincRNA lincRNA MGP_LPJ_T0015022.1 MGP_LPJ_G0013113.1 mouse_genomes_project 5 93261962 93262842 - processed_pseudogene processed_pseudogene MGP_LPJ_T0073259.1 MGP_LPJ_G0029826.1 mouse_genomes_project 5 117044122 117050902 - MGP_LPJ_P0073259 Tmem119 protein_coding protein_coding MGP_LPJ_T0073260.1 MGP_LPJ_G0029826.1 mouse_genomes_project 5 117046031 117050832 - MGP_LPJ_P0073260 Tmem119 protein_coding protein_coding MGP_LPJ_T0073170.1 MGP_LPJ_G0029807.1 mouse_genomes_project 5 115487107 115522363 + MGP_LPJ_P0073170 Hps4 protein_coding protein_coding MGP_LPJ_T0073171.1 MGP_LPJ_G0029807.1 mouse_genomes_project 5 115487117 115488772 + Hps4 protein_coding processed_transcript MGP_LPJ_T0073172.1 MGP_LPJ_G0029807.1 mouse_genomes_project 5 115487119 115522363 + Hps4 protein_coding retained_intron MGP_LPJ_T0073173.1 MGP_LPJ_G0029807.1 mouse_genomes_project 5 115487119 115522363 + MGP_LPJ_P0073173 Hps4 protein_coding protein_coding MGP_LPJ_T0073174.1 MGP_LPJ_G0029807.1 mouse_genomes_project 5 115487124 115488912 + Hps4 protein_coding processed_transcript MGP_LPJ_T0073176.1 MGP_LPJ_G0029807.1 mouse_genomes_project 5 115512689 115513719 + Hps4 protein_coding retained_intron MGP_LPJ_T0073177.1 MGP_LPJ_G0029807.1 mouse_genomes_project 5 115519286 115522350 + Hps4 protein_coding retained_intron MGP_LPJ_T0008171.1 MGP_LPJ_G0006661.1 mouse_genomes_project 5 67626002 67632305 + Gm43698 lincRNA lincRNA MGP_LPJ_T0008172.1 MGP_LPJ_G0006661.1 mouse_genomes_project 5 67632032 67633126 + Gm43698 lincRNA lincRNA MGP_LPJ_T0074791.1 MGP_LPJ_G0030097.1 mouse_genomes_project 5 140933022 140960587 - MGP_LPJ_P0074791 Ywhag protein_coding protein_coding MGP_LPJ_T0074792.1 MGP_LPJ_G0030097.1 mouse_genomes_project 5 140933022 140960542 - MGP_LPJ_P0074792 Ywhag protein_coding protein_coding MGP_LPJ_T0074793.1 MGP_LPJ_G0030097.1 mouse_genomes_project 5 140956651 140960585 - Ywhag protein_coding retained_intron MGP_LPJ_T0074794.1 MGP_LPJ_G0030097.1 mouse_genomes_project 5 140956656 140960604 - Ywhag protein_coding processed_transcript MGP_LPJ_T0074795.1 MGP_LPJ_G0030097.1 mouse_genomes_project 5 140956732 140960538 - Ywhag protein_coding processed_transcript MGP_LPJ_T0008055.1 MGP_LPJ_G0006578.1 mouse_genomes_project 5 6139484 6140752 - Gm15611 lincRNA lincRNA MGP_LPJ_T0099576.1 MGP_LPJ_G0037839.1 mouse_genomes_project 5 65829337 65829411 + Gm24399 snRNA snRNA MGP_LPJ_T0073962.1 MGP_LPJ_G0029958.1 mouse_genomes_project 5 126887953 126916074 + MGP_LPJ_P0073962 P2rx4 protein_coding protein_coding MGP_LPJ_T0073963.1 MGP_LPJ_G0029958.1 mouse_genomes_project 5 126887978 126891847 + P2rx4 protein_coding retained_intron MGP_LPJ_T0073964.1 MGP_LPJ_G0029958.1 mouse_genomes_project 5 126887979 126899910 + P2rx4 protein_coding retained_intron MGP_LPJ_T0073965.1 MGP_LPJ_G0029958.1 mouse_genomes_project 5 126887989 126911708 + MGP_LPJ_P0073965 P2rx4 protein_coding nonsense_mediated_decay MGP_LPJ_T0073966.1 MGP_LPJ_G0029958.1 mouse_genomes_project 5 126887993 126915380 + MGP_LPJ_P0073966 P2rx4 protein_coding protein_coding MGP_LPJ_T0073967.1 MGP_LPJ_G0029958.1 mouse_genomes_project 5 126888063 126914659 + MGP_LPJ_P0073967 P2rx4 protein_coding protein_coding MGP_LPJ_T0073968.1 MGP_LPJ_G0029958.1 mouse_genomes_project 5 126888063 126914659 + MGP_LPJ_P0073968 P2rx4 protein_coding protein_coding MGP_LPJ_T0073969.1 MGP_LPJ_G0029958.1 mouse_genomes_project 5 126913999 126914921 + P2rx4 protein_coding processed_transcript MGP_LPJ_T0071549.1 MGP_LPJ_G0029464.1 mouse_genomes_project 5 63934696 64001233 - MGP_LPJ_P0071549 Rell1 protein_coding protein_coding MGP_LPJ_T0071550.1 MGP_LPJ_G0029464.1 mouse_genomes_project 5 63934865 64001159 - MGP_LPJ_P0071550 Rell1 protein_coding nonsense_mediated_decay MGP_LPJ_T0071551.1 MGP_LPJ_G0029464.1 mouse_genomes_project 5 63950567 63956516 - Rell1 protein_coding processed_transcript MGP_LPJ_T0071552.1 MGP_LPJ_G0029464.1 mouse_genomes_project 5 63952822 63956379 - Rell1 protein_coding retained_intron MGP_LPJ_T0071553.1 MGP_LPJ_G0029464.1 mouse_genomes_project 5 63989267 64001175 - Rell1 protein_coding processed_transcript MGP_LPJ_T0015057.1 MGP_LPJ_G0013148.1 mouse_genomes_project 5 109485662 109485905 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098044.1 MGP_LPJ_G0036325.1 mouse_genomes_project 5 140912436 140913843 + pseudogene pseudogene MGP_LPJ_T0070026.1 MGP_LPJ_G0029202.1 mouse_genomes_project 5 13682708 14151094 + MGP_LPJ_P0070026 Cacna2d1 protein_coding protein_coding MGP_LPJ_T0070027.1 MGP_LPJ_G0029202.1 mouse_genomes_project 5 13682805 14151087 + MGP_LPJ_P0070027 Cacna2d1 protein_coding protein_coding MGP_LPJ_T0070028.1 MGP_LPJ_G0029202.1 mouse_genomes_project 5 13682805 14147654 + MGP_LPJ_P0070028 Cacna2d1 protein_coding protein_coding MGP_LPJ_T0070029.1 MGP_LPJ_G0029202.1 mouse_genomes_project 5 13682805 14147654 + MGP_LPJ_P0070029 Cacna2d1 protein_coding protein_coding MGP_LPJ_T0070030.1 MGP_LPJ_G0029202.1 mouse_genomes_project 5 13682805 14147654 + MGP_LPJ_P0070030 Cacna2d1 protein_coding protein_coding MGP_LPJ_T0070031.1 MGP_LPJ_G0029202.1 mouse_genomes_project 5 13682805 14147636 + MGP_LPJ_P0070031 Cacna2d1 protein_coding protein_coding MGP_LPJ_T0070032.1 MGP_LPJ_G0029202.1 mouse_genomes_project 5 13682846 14147312 + MGP_LPJ_P0070032 Cacna2d1 protein_coding protein_coding MGP_LPJ_T0070033.1 MGP_LPJ_G0029202.1 mouse_genomes_project 5 13682928 13842018 + MGP_LPJ_P0070033 Cacna2d1 protein_coding protein_coding MGP_LPJ_T0070034.1 MGP_LPJ_G0029202.1 mouse_genomes_project 5 13779227 14045065 + Cacna2d1 protein_coding retained_intron MGP_LPJ_T0070035.1 MGP_LPJ_G0029202.1 mouse_genomes_project 5 14100958 14104506 + Cacna2d1 protein_coding retained_intron MGP_LPJ_T0070036.1 MGP_LPJ_G0029202.1 mouse_genomes_project 5 14101078 14117649 + Cacna2d1 protein_coding retained_intron MGP_LPJ_T0070037.1 MGP_LPJ_G0029202.1 mouse_genomes_project 5 14137894 14138826 + Cacna2d1 protein_coding retained_intron MGP_LPJ_T0014835.1 MGP_LPJ_G0012926.1 mouse_genomes_project 5 19566084 19566892 + processed_pseudogene processed_pseudogene MGP_LPJ_T0070648.1 MGP_LPJ_G0029317.1 mouse_genomes_project 5 29642189 29645512 - MGP_LPJ_P0070648 Zfp513 protein_coding protein_coding MGP_LPJ_T0070649.1 MGP_LPJ_G0029317.1 mouse_genomes_project 5 29642191 29645251 - MGP_LPJ_P0070649 Zfp513 protein_coding protein_coding MGP_LPJ_T0070650.1 MGP_LPJ_G0029317.1 mouse_genomes_project 5 29642708 29643970 - Zfp513 protein_coding processed_transcript MGP_LPJ_T0070651.1 MGP_LPJ_G0029317.1 mouse_genomes_project 5 29642989 29643495 - MGP_LPJ_P0070651 Zfp513 protein_coding protein_coding MGP_LPJ_T0070652.1 MGP_LPJ_G0029317.1 mouse_genomes_project 5 29643089 29643971 - Zfp513 protein_coding processed_transcript MGP_LPJ_T0070653.1 MGP_LPJ_G0029317.1 mouse_genomes_project 5 29643197 29643971 - Zfp513 protein_coding processed_transcript MGP_LPJ_T0070654.1 MGP_LPJ_G0029317.1 mouse_genomes_project 5 29643877 29645424 - MGP_LPJ_P0070654 Zfp513 protein_coding protein_coding MGP_LPJ_T0070655.1 MGP_LPJ_G0029317.1 mouse_genomes_project 5 29643964 29645434 - MGP_LPJ_P0070655 Zfp513 protein_coding protein_coding MGP_LPJ_T0014946.1 MGP_LPJ_G0013037.1 mouse_genomes_project 5 59881908 59882102 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015074.1 MGP_LPJ_G0013165.1 mouse_genomes_project 5 112351393 112353410 - processed_pseudogene processed_pseudogene MGP_LPJ_T0069752.1 MGP_LPJ_G0029159.1 mouse_genomes_project 5 91177 93321 + MGP_LPJ_P0069752 protein_coding protein_coding MGP_LPJ_T0069755.1 MGP_LPJ_G0029159.1 mouse_genomes_project 5 92969 93202 + protein_coding transcribed_unprocessed_pseudogene MGP_LPJ_T0008396.1 MGP_LPJ_G0006815.1 mouse_genomes_project 5 131249671 131268118 - Gm42953 lincRNA lincRNA MGP_LPJ_T0010720.1 MGP_LPJ_G0008838.1 mouse_genomes_project 5 106280950 106281011 + Mir5619 miRNA miRNA MGP_LPJ_T0075667.1 MGP_LPJ_G0030279.1 mouse_genomes_project 5 152452718 152464787 - MGP_LPJ_P0075667 Rnf6 protein_coding protein_coding MGP_LPJ_T0075668.1 MGP_LPJ_G0030279.1 mouse_genomes_project 5 152452722 152464161 - MGP_LPJ_P0075668 Rnf6 protein_coding protein_coding MGP_LPJ_T0075669.1 MGP_LPJ_G0030279.1 mouse_genomes_project 5 152453482 152464236 - MGP_LPJ_P0075669 Rnf6 protein_coding protein_coding MGP_LPJ_T0075670.1 MGP_LPJ_G0030279.1 mouse_genomes_project 5 152454828 152461285 - MGP_LPJ_P0075670 Rnf6 protein_coding protein_coding MGP_LPJ_T0075671.1 MGP_LPJ_G0030279.1 mouse_genomes_project 5 152455201 152464650 - MGP_LPJ_P0075671 Rnf6 protein_coding protein_coding MGP_LPJ_T0075672.1 MGP_LPJ_G0030279.1 mouse_genomes_project 5 152455229 152464195 - MGP_LPJ_P0075672 Rnf6 protein_coding protein_coding MGP_LPJ_T0075673.1 MGP_LPJ_G0030279.1 mouse_genomes_project 5 152455378 152464208 - MGP_LPJ_P0075673 Rnf6 protein_coding protein_coding MGP_LPJ_T0075674.1 MGP_LPJ_G0030279.1 mouse_genomes_project 5 152461374 152464206 - Rnf6 protein_coding processed_transcript MGP_LPJ_T0008406.1 MGP_LPJ_G0006822.1 mouse_genomes_project 5 132966871 132972612 + lincRNA lincRNA MGP_LPJ_T0004697.1 MGP_LPJ_G0004069.1 mouse_genomes_project 5 37175858 37179423 - Gm26560 antisense antisense MGP_LPJ_T0008163.1 MGP_LPJ_G0006656.1 mouse_genomes_project 5 64528865 64535825 + C030018K13Rik lincRNA lincRNA MGP_LPJ_T0008164.1 MGP_LPJ_G0006656.1 mouse_genomes_project 5 64528871 64531604 + C030018K13Rik lincRNA lincRNA MGP_LPJ_T0008165.1 MGP_LPJ_G0006656.1 mouse_genomes_project 5 64528892 64534323 + C030018K13Rik lincRNA lincRNA MGP_LPJ_T0101367.1 MGP_LPJ_G0039566.1 mouse_genomes_project 5 89225295 89227949 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101368.1 MGP_LPJ_G0039566.1 mouse_genomes_project 5 89225454 89226579 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0001553.1 MGP_LPJ_G0001467.1 mouse_genomes_project 5 42595720 42599988 + TEC TEC MGP_LPJ_T0014976.1 MGP_LPJ_G0013067.1 mouse_genomes_project 5 72803123 72803637 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008144.1 MGP_LPJ_G0006638.1 mouse_genomes_project 5 49891881 50057350 + Gm43016 lincRNA lincRNA MGP_LPJ_T0075397.1 MGP_LPJ_G0030217.1 mouse_genomes_project 5 148420726 148471711 - MGP_LPJ_P0075397 Mmd2 protein_coding protein_coding MGP_LPJ_T0075398.1 MGP_LPJ_G0030217.1 mouse_genomes_project 5 148442146 148444022 - Mmd2 protein_coding retained_intron MGP_LPJ_T0075399.1 MGP_LPJ_G0030217.1 mouse_genomes_project 5 148443448 148471711 - Mmd2 protein_coding processed_transcript MGP_LPJ_T0001768.1 MGP_LPJ_G0001680.1 mouse_genomes_project 5 106303883 106306144 - TEC TEC MGP_LPJ_T0074177.1 MGP_LPJ_G0029990.1 mouse_genomes_project 5 128449446 128452211 + Ogfod2 protein_coding retained_intron MGP_LPJ_T0074178.1 MGP_LPJ_G0029990.1 mouse_genomes_project 5 128449450 128451632 + MGP_LPJ_P0074178 Ogfod2 protein_coding protein_coding MGP_LPJ_T0074179.1 MGP_LPJ_G0029990.1 mouse_genomes_project 5 128449463 128452615 + MGP_LPJ_P0074179 Ogfod2 protein_coding protein_coding MGP_LPJ_T0074180.1 MGP_LPJ_G0029990.1 mouse_genomes_project 5 128449465 128451500 + Ogfod2 protein_coding retained_intron MGP_LPJ_T0074181.1 MGP_LPJ_G0029990.1 mouse_genomes_project 5 128449465 128451588 + MGP_LPJ_P0074181 Ogfod2 protein_coding protein_coding MGP_LPJ_T0074182.1 MGP_LPJ_G0029990.1 mouse_genomes_project 5 128449482 128451892 + MGP_LPJ_P0074182 Ogfod2 protein_coding protein_coding MGP_LPJ_T0074183.1 MGP_LPJ_G0029990.1 mouse_genomes_project 5 128449556 128452093 + MGP_LPJ_P0074183 Ogfod2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074184.1 MGP_LPJ_G0029990.1 mouse_genomes_project 5 128449940 128451343 + Ogfod2 protein_coding retained_intron MGP_LPJ_T0074185.1 MGP_LPJ_G0029990.1 mouse_genomes_project 5 128450428 128452008 + Ogfod2 protein_coding retained_intron MGP_LPJ_T0075841.1 MGP_LPJ_G0030311.1 mouse_genomes_project 5 156225814 156319991 + MGP_LPJ_P0075841 B3glct protein_coding protein_coding MGP_LPJ_T0075842.1 MGP_LPJ_G0030311.1 mouse_genomes_project 5 156295846 156308487 + B3glct protein_coding processed_transcript MGP_LPJ_T0075843.1 MGP_LPJ_G0030311.1 mouse_genomes_project 5 156311281 156318001 + B3glct protein_coding retained_intron MGP_LPJ_T0073467.1 MGP_LPJ_G0029865.1 mouse_genomes_project 5 118722400 118726300 - MGP_LPJ_P0073467 Dynll1 protein_coding protein_coding MGP_LPJ_T0073468.1 MGP_LPJ_G0029865.1 mouse_genomes_project 5 118723714 118725964 - Dynll1 protein_coding retained_intron MGP_LPJ_T0073469.1 MGP_LPJ_G0029865.1 mouse_genomes_project 5 118723723 118724728 - Dynll1 protein_coding processed_transcript MGP_LPJ_T0073470.1 MGP_LPJ_G0029865.1 mouse_genomes_project 5 118723797 118726213 - MGP_LPJ_P0073470 Dynll1 protein_coding protein_coding MGP_LPJ_T0073471.1 MGP_LPJ_G0029865.1 mouse_genomes_project 5 118724848 118726180 - Dynll1 protein_coding processed_transcript MGP_LPJ_T0073472.1 MGP_LPJ_G0029865.1 mouse_genomes_project 5 118725566 118726235 - Dynll1 protein_coding retained_intron MGP_LPJ_T0018068.1 MGP_LPJ_G0015505.1 mouse_genomes_project 5 2112267 2114929 - Gm43623 processed_transcript processed_transcript MGP_LPJ_T0004868.1 MGP_LPJ_G0004188.1 mouse_genomes_project 5 132851405 132857408 + Gm42817 antisense antisense MGP_LPJ_T0074414.1 MGP_LPJ_G0030031.1 mouse_genomes_project 5 134301382 134311232 - Sept14 protein_coding processed_transcript MGP_LPJ_T0074415.1 MGP_LPJ_G0030031.1 mouse_genomes_project 5 134301393 134324966 - MGP_LPJ_P0074415 Sept14 protein_coding protein_coding MGP_LPJ_T0074416.1 MGP_LPJ_G0030031.1 mouse_genomes_project 5 134301430 134329882 - MGP_LPJ_P0074416 Sept14 protein_coding protein_coding MGP_LPJ_T0069865.1 MGP_LPJ_G0029177.1 mouse_genomes_project 5 2536193 2557431 - MGP_LPJ_P0069865 Gtpbp10 protein_coding unknown_likely_coding MGP_LPJ_T0069866.1 MGP_LPJ_G0029177.1 mouse_genomes_project 5 2536392 2557443 - MGP_LPJ_P0069866 Gtpbp10 protein_coding protein_coding MGP_LPJ_T0069867.1 MGP_LPJ_G0029177.1 mouse_genomes_project 5 2538843 2541133 - Gtpbp10 protein_coding retained_intron MGP_LPJ_T0069868.1 MGP_LPJ_G0029177.1 mouse_genomes_project 5 2538863 2540388 - Gtpbp10 protein_coding retained_intron MGP_LPJ_T0069869.1 MGP_LPJ_G0029177.1 mouse_genomes_project 5 2539280 2555172 - MGP_LPJ_P0069869 Gtpbp10 protein_coding nonsense_mediated_decay MGP_LPJ_T0069870.1 MGP_LPJ_G0029177.1 mouse_genomes_project 5 2541007 2557391 - MGP_LPJ_P0069870 Gtpbp10 protein_coding nonsense_mediated_decay MGP_LPJ_T0069871.1 MGP_LPJ_G0029177.1 mouse_genomes_project 5 2541051 2553684 - Gtpbp10 protein_coding retained_intron MGP_LPJ_T0069872.1 MGP_LPJ_G0029177.1 mouse_genomes_project 5 2541088 2544210 - Gtpbp10 protein_coding retained_intron MGP_LPJ_T0069873.1 MGP_LPJ_G0029177.1 mouse_genomes_project 5 2543291 2557412 - MGP_LPJ_P0069873 Gtpbp10 protein_coding nonsense_mediated_decay MGP_LPJ_T0069874.1 MGP_LPJ_G0029177.1 mouse_genomes_project 5 2556798 2557446 - MGP_LPJ_P0069874 Gtpbp10 protein_coding protein_coding MGP_LPJ_T0072163.1 MGP_LPJ_G0029566.1 mouse_genomes_project 5 87345094 87418115 - MGP_LPJ_P0072163 Uba6 protein_coding protein_coding MGP_LPJ_T0072164.1 MGP_LPJ_G0029566.1 mouse_genomes_project 5 87354368 87418116 - Uba6 protein_coding retained_intron MGP_LPJ_T0070107.1 MGP_LPJ_G0029216.1 mouse_genomes_project 5 19384298 19445239 + MGP_LPJ_P0070107 Fam185a protein_coding protein_coding MGP_LPJ_T0070108.1 MGP_LPJ_G0029216.1 mouse_genomes_project 5 19384341 19396723 + Fam185a protein_coding retained_intron MGP_LPJ_T0070109.1 MGP_LPJ_G0029216.1 mouse_genomes_project 5 19396857 19443919 + Fam185a protein_coding processed_transcript MGP_LPJ_T0015041.1 MGP_LPJ_G0013132.1 mouse_genomes_project 5 104601453 104602185 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015000.1 MGP_LPJ_G0013091.1 mouse_genomes_project 5 85796705 85797822 + processed_pseudogene processed_pseudogene MGP_LPJ_T0072664.1 MGP_LPJ_G0029695.1 mouse_genomes_project 5 102972412 102973510 + MGP_LPJ_P0072664 Agpat9 protein_coding protein_coding MGP_LPJ_T0072665.1 MGP_LPJ_G0029695.1 mouse_genomes_project 5 102972829 103025051 + MGP_LPJ_P0072665 Agpat9 protein_coding protein_coding MGP_LPJ_T0072666.1 MGP_LPJ_G0029695.1 mouse_genomes_project 5 102972918 103025051 + MGP_LPJ_P0072666 Agpat9 protein_coding protein_coding MGP_LPJ_T0072667.1 MGP_LPJ_G0029695.1 mouse_genomes_project 5 102973063 103025054 + MGP_LPJ_P0072667 Agpat9 protein_coding protein_coding MGP_LPJ_T0072668.1 MGP_LPJ_G0029695.1 mouse_genomes_project 5 102973116 102973550 + MGP_LPJ_P0072668 Agpat9 protein_coding protein_coding MGP_LPJ_T0071931.1 MGP_LPJ_G0029528.1 mouse_genomes_project 5 74090892 74105887 - MGP_LPJ_P0071931 Sgcb protein_coding protein_coding MGP_LPJ_T0071932.1 MGP_LPJ_G0029528.1 mouse_genomes_project 5 74102101 74102564 - Sgcb protein_coding retained_intron MGP_LPJ_T0074258.1 MGP_LPJ_G0030001.1 mouse_genomes_project 5 128906408 128915835 + MGP_LPJ_P0074258 Tmed2 protein_coding protein_coding MGP_LPJ_T0074259.1 MGP_LPJ_G0030001.1 mouse_genomes_project 5 128906668 128914730 + MGP_LPJ_P0074259 Tmed2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074260.1 MGP_LPJ_G0030001.1 mouse_genomes_project 5 128907042 128914921 + MGP_LPJ_P0074260 Tmed2 protein_coding protein_coding MGP_LPJ_T0074261.1 MGP_LPJ_G0030001.1 mouse_genomes_project 5 128907049 128907463 + Tmed2 protein_coding retained_intron MGP_LPJ_T0015094.1 MGP_LPJ_G0013185.1 mouse_genomes_project 5 120879908 120880286 - processed_pseudogene processed_pseudogene MGP_LPJ_T0075561.1 MGP_LPJ_G0030251.1 mouse_genomes_project 5 150192433 150399519 + MGP_LPJ_P0075561 Bri3 protein_coding nonsense_mediated_decay MGP_LPJ_T0070891.1 MGP_LPJ_G0029354.1 mouse_genomes_project 5 32446193 32525163 + MGP_LPJ_P0070891 Whsc1 protein_coding protein_coding MGP_LPJ_T0070892.1 MGP_LPJ_G0029354.1 mouse_genomes_project 5 32446212 32499737 + MGP_LPJ_P0070892 Whsc1 protein_coding protein_coding MGP_LPJ_T0070893.1 MGP_LPJ_G0029354.1 mouse_genomes_project 5 32446297 32473427 + MGP_LPJ_P0070893 Whsc1 protein_coding protein_coding MGP_LPJ_T0070894.1 MGP_LPJ_G0029354.1 mouse_genomes_project 5 32470356 32525172 + MGP_LPJ_P0070894 Whsc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0070895.1 MGP_LPJ_G0029354.1 mouse_genomes_project 5 32470356 32504517 + MGP_LPJ_P0070895 Whsc1 protein_coding protein_coding MGP_LPJ_T0070896.1 MGP_LPJ_G0029354.1 mouse_genomes_project 5 32470356 32525172 + MGP_LPJ_P0070896 Whsc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0070897.1 MGP_LPJ_G0029354.1 mouse_genomes_project 5 32470356 32525163 + MGP_LPJ_P0070897 Whsc1 protein_coding protein_coding MGP_LPJ_T0070898.1 MGP_LPJ_G0029354.1 mouse_genomes_project 5 32470385 32522909 + MGP_LPJ_P0070898 Whsc1 protein_coding protein_coding MGP_LPJ_T0070899.1 MGP_LPJ_G0029354.1 mouse_genomes_project 5 32470440 32522692 + MGP_LPJ_P0070899 Whsc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0070900.1 MGP_LPJ_G0029354.1 mouse_genomes_project 5 32488271 32504525 + MGP_LPJ_P0070900 Whsc1 protein_coding protein_coding MGP_LPJ_T0070901.1 MGP_LPJ_G0029354.1 mouse_genomes_project 5 32505449 32507315 + Whsc1 protein_coding retained_intron MGP_LPJ_T0070902.1 MGP_LPJ_G0029354.1 mouse_genomes_project 5 32506385 32522623 + MGP_LPJ_P0070902 Whsc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0070903.1 MGP_LPJ_G0029354.1 mouse_genomes_project 5 32512718 32518871 + Whsc1 protein_coding retained_intron MGP_LPJ_T0070904.1 MGP_LPJ_G0029354.1 mouse_genomes_project 5 32512732 32514920 + Whsc1 protein_coding retained_intron MGP_LPJ_T0070905.1 MGP_LPJ_G0029354.1 mouse_genomes_project 5 32519101 32522292 + Whsc1 protein_coding retained_intron MGP_LPJ_T0100826.1 MGP_LPJ_G0039089.1 mouse_genomes_project 5 52439506 52439618 - Gm23532 snoRNA snoRNA MGP_LPJ_T0001620.1 MGP_LPJ_G0001534.1 mouse_genomes_project 5 51320956 51324766 - TEC TEC MGP_LPJ_T0018088.1 MGP_LPJ_G0015513.1 mouse_genomes_project 5 49787859 49892740 - Gm36814 processed_transcript lincRNA MGP_LPJ_T0018089.1 MGP_LPJ_G0015513.1 mouse_genomes_project 5 49871577 49891776 - Gm36814 processed_transcript retained_intron MGP_LPJ_T0014845.1 MGP_LPJ_G0012936.1 mouse_genomes_project 5 20926619 20927236 - processed_pseudogene processed_pseudogene MGP_LPJ_T0074337.1 MGP_LPJ_G0030015.1 mouse_genomes_project 5 129812671 129831528 + MGP_LPJ_P0074337 Bri3bp protein_coding protein_coding MGP_LPJ_T0074338.1 MGP_LPJ_G0030015.1 mouse_genomes_project 5 129812853 129825870 + MGP_LPJ_P0074338 Bri3bp protein_coding protein_coding MGP_LPJ_T0073447.1 MGP_LPJ_G0029862.1 mouse_genomes_project 5 118657982 118663121 + MGP_LPJ_P0073447 Pop5 protein_coding protein_coding MGP_LPJ_T0073448.1 MGP_LPJ_G0029862.1 mouse_genomes_project 5 118660104 118662372 + Pop5 protein_coding processed_transcript MGP_LPJ_T0073449.1 MGP_LPJ_G0029862.1 mouse_genomes_project 5 118660157 118667493 + MGP_LPJ_P0073449 Pop5 protein_coding nonsense_mediated_decay MGP_LPJ_T0073450.1 MGP_LPJ_G0029862.1 mouse_genomes_project 5 118660160 118663074 + Pop5 protein_coding processed_transcript MGP_LPJ_T0073451.1 MGP_LPJ_G0029862.1 mouse_genomes_project 5 118660172 118662797 + Pop5 protein_coding retained_intron MGP_LPJ_T0073452.1 MGP_LPJ_G0029862.1 mouse_genomes_project 5 118662470 118663096 + Pop5 protein_coding processed_transcript MGP_LPJ_T0008269.1 MGP_LPJ_G0006736.1 mouse_genomes_project 5 108906772 108908588 + Gm42916 lincRNA lincRNA MGP_LPJ_T0008218.1 MGP_LPJ_G0006699.1 mouse_genomes_project 5 93566187 93579036 + Gm26582 lincRNA lincRNA MGP_LPJ_T0008091.1 MGP_LPJ_G0006601.1 mouse_genomes_project 5 27741688 27754513 + 4632411P08Rik lincRNA lincRNA MGP_LPJ_T0072274.1 MGP_LPJ_G0029607.1 mouse_genomes_project 5 89845111 89858463 + MGP_LPJ_P0072274 Ambn protein_coding protein_coding MGP_LPJ_T0072275.1 MGP_LPJ_G0029607.1 mouse_genomes_project 5 89845131 89858812 + MGP_LPJ_P0072275 Ambn protein_coding protein_coding MGP_LPJ_T0015009.1 MGP_LPJ_G0013100.1 mouse_genomes_project 5 89099321 89099426 - processed_pseudogene processed_pseudogene MGP_LPJ_T0072208.1 MGP_LPJ_G0029587.1 mouse_genomes_project 5 88864691 88889794 - MGP_LPJ_P0072208 Sult1b1 protein_coding protein_coding MGP_LPJ_T0072209.1 MGP_LPJ_G0029587.1 mouse_genomes_project 5 88864718 88887825 - MGP_LPJ_P0072209 Sult1b1 protein_coding protein_coding MGP_LPJ_T0072210.1 MGP_LPJ_G0029587.1 mouse_genomes_project 5 88866041 88886749 - MGP_LPJ_P0072210 Sult1b1 protein_coding protein_coding MGP_LPJ_T0072916.1 MGP_LPJ_G0029751.1 mouse_genomes_project 5 110797391 110831350 + MGP_LPJ_P0072916 Ccdc18 protein_coding nonsense_mediated_decay MGP_LPJ_T0072917.1 MGP_LPJ_G0029751.1 mouse_genomes_project 5 110797430 110917768 + MGP_LPJ_P0072917 Ccdc18 protein_coding protein_coding MGP_LPJ_T0072918.1 MGP_LPJ_G0029751.1 mouse_genomes_project 5 110797462 110804719 + Ccdc18 protein_coding retained_intron MGP_LPJ_T0072919.1 MGP_LPJ_G0029751.1 mouse_genomes_project 5 110831535 110844540 + Ccdc18 protein_coding processed_transcript MGP_LPJ_T0014991.1 MGP_LPJ_G0013082.1 mouse_genomes_project 5 77994470 77994753 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001544.1 MGP_LPJ_G0001458.1 mouse_genomes_project 5 35697367 35697517 + TEC TEC MGP_LPJ_T0001483.1 MGP_LPJ_G0001400.1 mouse_genomes_project 5 11172409 11174608 + TEC TEC MGP_LPJ_T0015170.1 MGP_LPJ_G0013261.1 mouse_genomes_project 5 156575215 156576725 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004843.1 MGP_LPJ_G0004172.1 mouse_genomes_project 5 126162470 126166843 + Gm3970 antisense antisense MGP_LPJ_T0098639.1 MGP_LPJ_G0036912.1 mouse_genomes_project 5 148950107 148951231 - sense_intronic sense_intronic MGP_LPJ_T0072397.1 MGP_LPJ_G0029643.1 mouse_genomes_project 5 93575220 93607995 - MGP_LPJ_P0072397 G3bp2 protein_coding protein_coding MGP_LPJ_T0072398.1 MGP_LPJ_G0029643.1 mouse_genomes_project 5 93575238 93608157 - MGP_LPJ_P0072398 G3bp2 protein_coding protein_coding MGP_LPJ_T0072399.1 MGP_LPJ_G0029643.1 mouse_genomes_project 5 93576791 93607676 - MGP_LPJ_P0072399 G3bp2 protein_coding protein_coding MGP_LPJ_T0072400.1 MGP_LPJ_G0029643.1 mouse_genomes_project 5 93576791 93607951 - MGP_LPJ_P0072400 G3bp2 protein_coding protein_coding MGP_LPJ_T0072401.1 MGP_LPJ_G0029643.1 mouse_genomes_project 5 93577574 93608096 - MGP_LPJ_P0072401 G3bp2 protein_coding protein_coding MGP_LPJ_T0072402.1 MGP_LPJ_G0029643.1 mouse_genomes_project 5 93579435 93590569 - G3bp2 protein_coding processed_transcript MGP_LPJ_T0072403.1 MGP_LPJ_G0029643.1 mouse_genomes_project 5 93580893 93590560 - G3bp2 protein_coding retained_intron MGP_LPJ_T0072404.1 MGP_LPJ_G0029643.1 mouse_genomes_project 5 93589566 93596414 - MGP_LPJ_P0072404 G3bp2 protein_coding protein_coding MGP_LPJ_T0072405.1 MGP_LPJ_G0029643.1 mouse_genomes_project 5 93591360 93607701 - MGP_LPJ_P0072405 G3bp2 protein_coding protein_coding MGP_LPJ_T0072406.1 MGP_LPJ_G0029643.1 mouse_genomes_project 5 93592812 93608155 - G3bp2 protein_coding retained_intron MGP_LPJ_T0071396.1 MGP_LPJ_G0029438.1 mouse_genomes_project 5 47235532 47574474 + MGP_LPJ_P0071396 Slit2 protein_coding protein_coding MGP_LPJ_T0071397.1 MGP_LPJ_G0029438.1 mouse_genomes_project 5 47235548 47242724 + Slit2 protein_coding retained_intron MGP_LPJ_T0071398.1 MGP_LPJ_G0029438.1 mouse_genomes_project 5 47235548 47443285 + Slit2 protein_coding retained_intron MGP_LPJ_T0071399.1 MGP_LPJ_G0029438.1 mouse_genomes_project 5 47235548 47572252 + MGP_LPJ_P0071399 Slit2 protein_coding protein_coding MGP_LPJ_T0071400.1 MGP_LPJ_G0029438.1 mouse_genomes_project 5 47235548 47572252 + MGP_LPJ_P0071400 Slit2 protein_coding protein_coding MGP_LPJ_T0071401.1 MGP_LPJ_G0029438.1 mouse_genomes_project 5 47235548 47572252 + MGP_LPJ_P0071401 Slit2 protein_coding protein_coding MGP_LPJ_T0071402.1 MGP_LPJ_G0029438.1 mouse_genomes_project 5 47235548 47571137 + MGP_LPJ_P0071402 Slit2 protein_coding nonsense_mediated_decay MGP_LPJ_T0071403.1 MGP_LPJ_G0029438.1 mouse_genomes_project 5 47235552 47339240 + Slit2 protein_coding processed_transcript MGP_LPJ_T0071404.1 MGP_LPJ_G0029438.1 mouse_genomes_project 5 47235571 47238063 + Slit2 protein_coding retained_intron MGP_LPJ_T0071405.1 MGP_LPJ_G0029438.1 mouse_genomes_project 5 47237388 47433314 + Slit2 protein_coding processed_transcript MGP_LPJ_T0071406.1 MGP_LPJ_G0029438.1 mouse_genomes_project 5 47240233 47451133 + MGP_LPJ_P0071406 Slit2 protein_coding nonsense_mediated_decay MGP_LPJ_T0071407.1 MGP_LPJ_G0029438.1 mouse_genomes_project 5 47427688 47452337 + Slit2 protein_coding processed_transcript MGP_LPJ_T0071408.1 MGP_LPJ_G0029438.1 mouse_genomes_project 5 47434354 47439162 + Slit2 protein_coding retained_intron MGP_LPJ_T0071409.1 MGP_LPJ_G0029438.1 mouse_genomes_project 5 47442229 47480737 + Slit2 protein_coding retained_intron MGP_LPJ_T0071410.1 MGP_LPJ_G0029438.1 mouse_genomes_project 5 47449594 47494379 + Slit2 protein_coding processed_transcript MGP_LPJ_T0071411.1 MGP_LPJ_G0029438.1 mouse_genomes_project 5 47485437 47502743 + Slit2 protein_coding processed_transcript MGP_LPJ_T0071412.1 MGP_LPJ_G0029438.1 mouse_genomes_project 5 47495747 47549689 + Slit2 protein_coding retained_intron MGP_LPJ_T0071413.1 MGP_LPJ_G0029438.1 mouse_genomes_project 5 47502791 47525471 + MGP_LPJ_P0071413 Slit2 protein_coding protein_coding MGP_LPJ_T0071414.1 MGP_LPJ_G0029438.1 mouse_genomes_project 5 47510259 47513952 + Slit2 protein_coding retained_intron MGP_LPJ_T0071415.1 MGP_LPJ_G0029438.1 mouse_genomes_project 5 47514516 47528539 + Slit2 protein_coding retained_intron MGP_LPJ_T0071416.1 MGP_LPJ_G0029438.1 mouse_genomes_project 5 47522446 47525425 + Slit2 protein_coding retained_intron MGP_LPJ_T0071417.1 MGP_LPJ_G0029438.1 mouse_genomes_project 5 47541983 47548540 + Slit2 protein_coding retained_intron MGP_LPJ_T0071418.1 MGP_LPJ_G0029438.1 mouse_genomes_project 5 47548518 47569253 + MGP_LPJ_P0071418 Slit2 protein_coding nonsense_mediated_decay MGP_LPJ_T0004811.1 MGP_LPJ_G0004151.1 mouse_genomes_project 5 118360701 118363279 + Hnf1aos2 antisense antisense MGP_LPJ_T0075659.1 MGP_LPJ_G0030275.1 mouse_genomes_project 5 151515798 151550177 - MGP_LPJ_P0075659 protein_coding protein_coding MGP_LPJ_T0001515.1 MGP_LPJ_G0001431.1 mouse_genomes_project 5 27644057 27648352 - TEC TEC MGP_LPJ_T0070843.1 MGP_LPJ_G0029347.1 mouse_genomes_project 5 32206296 32236275 - MGP_LPJ_P0070843 Fam53a protein_coding protein_coding MGP_LPJ_T0070844.1 MGP_LPJ_G0029347.1 mouse_genomes_project 5 32206305 32235552 - MGP_LPJ_P0070844 Fam53a protein_coding protein_coding MGP_LPJ_T0070845.1 MGP_LPJ_G0029347.1 mouse_genomes_project 5 32206305 32236262 - MGP_LPJ_P0070845 Fam53a protein_coding protein_coding MGP_LPJ_T0070846.1 MGP_LPJ_G0029347.1 mouse_genomes_project 5 32206305 32236228 - MGP_LPJ_P0070846 Fam53a protein_coding nonsense_mediated_decay MGP_LPJ_T0070847.1 MGP_LPJ_G0029347.1 mouse_genomes_project 5 32214164 32236223 - MGP_LPJ_P0070847 Fam53a protein_coding nonsense_mediated_decay MGP_LPJ_T0070848.1 MGP_LPJ_G0029347.1 mouse_genomes_project 5 32214337 32236239 - MGP_LPJ_P0070848 Fam53a protein_coding protein_coding MGP_LPJ_T0070849.1 MGP_LPJ_G0029347.1 mouse_genomes_project 5 32216409 32235702 - MGP_LPJ_P0070849 Fam53a protein_coding protein_coding MGP_LPJ_T0070850.1 MGP_LPJ_G0029347.1 mouse_genomes_project 5 32221288 32236245 - Fam53a protein_coding processed_transcript MGP_LPJ_T0075096.1 MGP_LPJ_G0030154.1 mouse_genomes_project 5 143256973 143267820 - MGP_LPJ_P0075096 Gjc3 protein_coding protein_coding MGP_LPJ_T0075097.1 MGP_LPJ_G0030154.1 mouse_genomes_project 5 143267233 143267817 - Gjc3 protein_coding retained_intron MGP_LPJ_T0014828.1 MGP_LPJ_G0012919.1 mouse_genomes_project 5 18175457 18175797 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004664.1 MGP_LPJ_G0004040.1 mouse_genomes_project 5 18889474 18894881 + A630072M18Rik antisense antisense MGP_LPJ_T0004721.1 MGP_LPJ_G0004085.1 mouse_genomes_project 5 53044403 53047871 - Gm10441 antisense antisense MGP_LPJ_T0075060.1 MGP_LPJ_G0030145.1 mouse_genomes_project 5 142998827 143009195 - MGP_LPJ_P0075060 Nyap1 protein_coding protein_coding MGP_LPJ_T0075061.1 MGP_LPJ_G0030145.1 mouse_genomes_project 5 142999841 143010848 - MGP_LPJ_P0075061 Nyap1 protein_coding protein_coding MGP_LPJ_T0075062.1 MGP_LPJ_G0030145.1 mouse_genomes_project 5 143000658 143010384 - MGP_LPJ_P0075062 Nyap1 protein_coding unknown_likely_coding MGP_LPJ_T0075063.1 MGP_LPJ_G0030145.1 mouse_genomes_project 5 143001951 143010343 - MGP_LPJ_P0075063 Nyap1 protein_coding protein_coding MGP_LPJ_T0072141.1 MGP_LPJ_G0029563.1 mouse_genomes_project 5 85188113 85575299 - MGP_LPJ_P0072141 Epha5 protein_coding protein_coding MGP_LPJ_T0072142.1 MGP_LPJ_G0029563.1 mouse_genomes_project 5 85191143 85575184 - MGP_LPJ_P0072142 Epha5 protein_coding protein_coding MGP_LPJ_T0072143.1 MGP_LPJ_G0029563.1 mouse_genomes_project 5 85191143 85575184 - MGP_LPJ_P0072143 Epha5 protein_coding protein_coding MGP_LPJ_T0072144.1 MGP_LPJ_G0029563.1 mouse_genomes_project 5 85198820 85575737 - MGP_LPJ_P0072144 Epha5 protein_coding protein_coding MGP_LPJ_T0072145.1 MGP_LPJ_G0029563.1 mouse_genomes_project 5 85198820 85575184 - MGP_LPJ_P0072145 Epha5 protein_coding protein_coding MGP_LPJ_T0072146.1 MGP_LPJ_G0029563.1 mouse_genomes_project 5 85198820 85575184 - MGP_LPJ_P0072146 Epha5 protein_coding protein_coding MGP_LPJ_T0072147.1 MGP_LPJ_G0029563.1 mouse_genomes_project 5 85241912 85575299 - Epha5 protein_coding retained_intron MGP_LPJ_T0072148.1 MGP_LPJ_G0029563.1 mouse_genomes_project 5 85290791 85575299 - Epha5 protein_coding retained_intron MGP_LPJ_T0072149.1 MGP_LPJ_G0029563.1 mouse_genomes_project 5 85380093 85575760 - Epha5 protein_coding retained_intron MGP_LPJ_T0072150.1 MGP_LPJ_G0029563.1 mouse_genomes_project 5 85484925 85575760 - Epha5 protein_coding retained_intron MGP_LPJ_T0072151.1 MGP_LPJ_G0029563.1 mouse_genomes_project 5 85515635 85519360 - Epha5 protein_coding retained_intron MGP_LPJ_T0001615.1 MGP_LPJ_G0001529.1 mouse_genomes_project 5 50898617 50900551 + TEC TEC MGP_LPJ_T0072741.1 MGP_LPJ_G0029714.1 mouse_genomes_project 5 106581074 106598078 + MGP_LPJ_P0072741 Mepe protein_coding protein_coding MGP_LPJ_T0001683.1 MGP_LPJ_G0001596.1 mouse_genomes_project 5 66764314 66766698 - TEC TEC MGP_LPJ_T0001783.1 MGP_LPJ_G0001695.1 mouse_genomes_project 5 114068017 114068751 + TEC TEC MGP_LPJ_T0001754.1 MGP_LPJ_G0001666.1 mouse_genomes_project 5 99983867 99986304 + TEC TEC MGP_LPJ_T0072998.1 MGP_LPJ_G0029774.1 mouse_genomes_project 5 112221473 112261042 + MGP_LPJ_P0072998 Vmn2r17 protein_coding protein_coding MGP_LPJ_T0073329.1 MGP_LPJ_G0029838.1 mouse_genomes_project 5 117667831 117684881 - MGP_LPJ_P0073329 Kctd10 protein_coding protein_coding MGP_LPJ_T0073330.1 MGP_LPJ_G0029838.1 mouse_genomes_project 5 117668726 117684862 - MGP_LPJ_P0073330 Kctd10 protein_coding nonsense_mediated_decay MGP_LPJ_T0073331.1 MGP_LPJ_G0029838.1 mouse_genomes_project 5 117669885 117684856 - MGP_LPJ_P0073331 Kctd10 protein_coding protein_coding MGP_LPJ_T0073332.1 MGP_LPJ_G0029838.1 mouse_genomes_project 5 117669969 117676393 - Kctd10 protein_coding processed_transcript MGP_LPJ_T0073333.1 MGP_LPJ_G0029838.1 mouse_genomes_project 5 117671146 117672921 - Kctd10 protein_coding retained_intron MGP_LPJ_T0073334.1 MGP_LPJ_G0029838.1 mouse_genomes_project 5 117671166 117674463 - Kctd10 protein_coding retained_intron MGP_LPJ_T0073335.1 MGP_LPJ_G0029838.1 mouse_genomes_project 5 117671247 117673506 - Kctd10 protein_coding retained_intron MGP_LPJ_T0004759.1 MGP_LPJ_G0004118.1 mouse_genomes_project 5 98632410 98636246 - Gm42604 antisense antisense MGP_LPJ_T0001879.1 MGP_LPJ_G0001790.1 mouse_genomes_project 5 136392585 136393285 - TEC TEC MGP_LPJ_T0072177.1 MGP_LPJ_G0029572.1 mouse_genomes_project 5 87770681 87876266 - MGP_LPJ_P0072177 Tmprss11f protein_coding protein_coding MGP_LPJ_T0072178.1 MGP_LPJ_G0029572.1 mouse_genomes_project 5 87807326 87876266 - Tmprss11f protein_coding processed_transcript MGP_LPJ_T0072179.1 MGP_LPJ_G0029572.1 mouse_genomes_project 5 87835074 87876225 - Tmprss11f protein_coding retained_intron MGP_LPJ_T0008250.1 MGP_LPJ_G0006723.1 mouse_genomes_project 5 103863729 103866100 + Gm43270 lincRNA lincRNA MGP_LPJ_T0008430.1 MGP_LPJ_G0006836.1 mouse_genomes_project 5 142351206 142366070 + lincRNA lincRNA MGP_LPJ_T0014807.1 MGP_LPJ_G0012898.1 mouse_genomes_project 5 7001391 7002355 + processed_pseudogene processed_pseudogene MGP_LPJ_T0018160.1 MGP_LPJ_G0015536.1 mouse_genomes_project 5 156411925 156428479 + 4930500F04Rik processed_transcript lincRNA MGP_LPJ_T0018161.1 MGP_LPJ_G0015536.1 mouse_genomes_project 5 156412143 156428475 + 4930500F04Rik processed_transcript lincRNA MGP_LPJ_T0018162.1 MGP_LPJ_G0015536.1 mouse_genomes_project 5 156416483 156418590 + 4930500F04Rik processed_transcript retained_intron MGP_LPJ_T0004836.1 MGP_LPJ_G0004165.1 mouse_genomes_project 5 124304674 124305736 - Gm15690 antisense antisense MGP_LPJ_T0098274.1 MGP_LPJ_G0036555.1 mouse_genomes_project 5 93644213 93644320 - Gm24931 rRNA rRNA MGP_LPJ_T0072205.1 MGP_LPJ_G0029585.1 mouse_genomes_project 5 88797317 88827387 - MGP_LPJ_P0072205 Ugt2a2 protein_coding protein_coding MGP_LPJ_T0072207.1 MGP_LPJ_G0029585.1 mouse_genomes_project 5 88798165 88827389 - MGP_LPJ_P0072207 Ugt2a2 protein_coding protein_coding MGP_LPJ_T0072994.1 MGP_LPJ_G0029770.1 mouse_genomes_project 5 111974690 112029957 - MGP_LPJ_P0072994 protein_coding protein_coding MGP_LPJ_T0014981.1 MGP_LPJ_G0013072.1 mouse_genomes_project 5 75420271 75421172 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001552.1 MGP_LPJ_G0001466.1 mouse_genomes_project 5 42331260 42332472 + TEC TEC MGP_LPJ_T0014974.1 MGP_LPJ_G0013065.1 mouse_genomes_project 5 72420763 72421534 - processed_pseudogene processed_pseudogene MGP_LPJ_T0070221.1 MGP_LPJ_G0029239.1 mouse_genomes_project 5 22516539 22525851 + MGP_LPJ_P0070221 Abcb8 protein_coding protein_coding MGP_LPJ_T0070222.1 MGP_LPJ_G0029239.1 mouse_genomes_project 5 22516552 22535673 + MGP_LPJ_P0070222 Abcb8 protein_coding protein_coding MGP_LPJ_T0070223.1 MGP_LPJ_G0029239.1 mouse_genomes_project 5 22517041 22535564 + MGP_LPJ_P0070223 Abcb8 protein_coding protein_coding MGP_LPJ_T0070224.1 MGP_LPJ_G0029239.1 mouse_genomes_project 5 22517282 22529604 + Abcb8 protein_coding processed_transcript MGP_LPJ_T0070225.1 MGP_LPJ_G0029239.1 mouse_genomes_project 5 22517294 22526294 + Abcb8 protein_coding retained_intron MGP_LPJ_T0070226.1 MGP_LPJ_G0029239.1 mouse_genomes_project 5 22526226 22535566 + MGP_LPJ_P0070226 Abcb8 protein_coding protein_coding MGP_LPJ_T0070227.1 MGP_LPJ_G0029239.1 mouse_genomes_project 5 22527882 22532338 + Abcb8 protein_coding retained_intron MGP_LPJ_T0070228.1 MGP_LPJ_G0029239.1 mouse_genomes_project 5 22531441 22535565 + Abcb8 protein_coding retained_intron MGP_LPJ_T0070229.1 MGP_LPJ_G0029239.1 mouse_genomes_project 5 22532034 22535543 + MGP_LPJ_P0070229 Abcb8 protein_coding protein_coding MGP_LPJ_T0015078.1 MGP_LPJ_G0013169.1 mouse_genomes_project 5 113713553 113715245 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001535.1 MGP_LPJ_G0001449.1 mouse_genomes_project 5 32337010 32342040 - TEC TEC MGP_LPJ_T0075626.1 MGP_LPJ_G0030266.1 mouse_genomes_project 5 151178877 151193565 + MGP_LPJ_P0075626 Cpsf4 protein_coding protein_coding MGP_LPJ_T0075627.1 MGP_LPJ_G0030266.1 mouse_genomes_project 5 151178888 151193565 + MGP_LPJ_P0075627 Cpsf4 protein_coding protein_coding MGP_LPJ_T0075628.1 MGP_LPJ_G0030266.1 mouse_genomes_project 5 151178911 151193564 + MGP_LPJ_P0075628 Cpsf4 protein_coding protein_coding MGP_LPJ_T0075629.1 MGP_LPJ_G0030266.1 mouse_genomes_project 5 151178918 151193277 + MGP_LPJ_P0075629 Cpsf4 protein_coding protein_coding MGP_LPJ_T0075630.1 MGP_LPJ_G0030266.1 mouse_genomes_project 5 151178935 151192756 + MGP_LPJ_P0075630 Cpsf4 protein_coding nonsense_mediated_decay MGP_LPJ_T0075631.1 MGP_LPJ_G0030266.1 mouse_genomes_project 5 151179122 151192877 + MGP_LPJ_P0075631 Cpsf4 protein_coding protein_coding MGP_LPJ_T0075632.1 MGP_LPJ_G0030266.1 mouse_genomes_project 5 151182034 151193565 + Cpsf4 protein_coding retained_intron MGP_LPJ_T0075040.1 MGP_LPJ_G0030141.1 mouse_genomes_project 5 142878530 142892249 + MGP_LPJ_P0075040 protein_coding nonsense_mediated_decay MGP_LPJ_T0004752.1 MGP_LPJ_G0004112.1 mouse_genomes_project 5 89292628 89367259 - 1700066N21Rik antisense antisense MGP_LPJ_T0074212.1 MGP_LPJ_G0029994.1 mouse_genomes_project 5 128679120 128692396 + MGP_LPJ_P0074212 2810006K23Rik protein_coding protein_coding MGP_LPJ_T0074213.1 MGP_LPJ_G0029994.1 mouse_genomes_project 5 128679129 128694118 + MGP_LPJ_P0074213 2810006K23Rik protein_coding protein_coding MGP_LPJ_T0075633.1 MGP_LPJ_G0030267.1 mouse_genomes_project 5 151195951 151204297 - MGP_LPJ_P0075633 Atp5j2 protein_coding protein_coding MGP_LPJ_T0075634.1 MGP_LPJ_G0030267.1 mouse_genomes_project 5 151195959 151203827 - MGP_LPJ_P0075634 Atp5j2 protein_coding nonsense_mediated_decay MGP_LPJ_T0075635.1 MGP_LPJ_G0030267.1 mouse_genomes_project 5 151195962 151203827 - MGP_LPJ_P0075635 Atp5j2 protein_coding protein_coding MGP_LPJ_T0075636.1 MGP_LPJ_G0030267.1 mouse_genomes_project 5 151196639 151203746 - MGP_LPJ_P0075636 Atp5j2 protein_coding protein_coding MGP_LPJ_T0075637.1 MGP_LPJ_G0030267.1 mouse_genomes_project 5 151201662 151203763 - Atp5j2 protein_coding retained_intron MGP_LPJ_T0072859.1 MGP_LPJ_G0029743.1 mouse_genomes_project 5 110222187 110293026 + MGP_LPJ_P0072859 Rpap2 protein_coding protein_coding MGP_LPJ_T0072860.1 MGP_LPJ_G0029743.1 mouse_genomes_project 5 110222208 110268788 + MGP_LPJ_P0072860 Rpap2 protein_coding protein_coding MGP_LPJ_T0072861.1 MGP_LPJ_G0029743.1 mouse_genomes_project 5 110222211 110226416 + Rpap2 protein_coding processed_transcript MGP_LPJ_T0072862.1 MGP_LPJ_G0029743.1 mouse_genomes_project 5 110222264 110268788 + MGP_LPJ_P0072862 Rpap2 protein_coding protein_coding MGP_LPJ_T0072863.1 MGP_LPJ_G0029743.1 mouse_genomes_project 5 110222278 110293030 + MGP_LPJ_P0072863 Rpap2 protein_coding protein_coding MGP_LPJ_T0072864.1 MGP_LPJ_G0029743.1 mouse_genomes_project 5 110222451 110226244 + MGP_LPJ_P0072864 Rpap2 protein_coding protein_coding MGP_LPJ_T0072865.1 MGP_LPJ_G0029743.1 mouse_genomes_project 5 110222472 110231411 + MGP_LPJ_P0072865 Rpap2 protein_coding protein_coding MGP_LPJ_T0072969.1 MGP_LPJ_G0029762.1 mouse_genomes_project 5 111371098 111403356 + MGP_LPJ_P0072969 Idua protein_coding protein_coding MGP_LPJ_T0072970.1 MGP_LPJ_G0029762.1 mouse_genomes_project 5 111380744 111403361 + MGP_LPJ_P0072970 Idua protein_coding protein_coding MGP_LPJ_T0072971.1 MGP_LPJ_G0029762.1 mouse_genomes_project 5 111380744 111403356 + MGP_LPJ_P0072971 Idua protein_coding nonsense_mediated_decay MGP_LPJ_T0072972.1 MGP_LPJ_G0029762.1 mouse_genomes_project 5 111380933 111393351 + Idua protein_coding retained_intron MGP_LPJ_T0072973.1 MGP_LPJ_G0029762.1 mouse_genomes_project 5 111380949 111403356 + MGP_LPJ_P0072973 Idua protein_coding protein_coding MGP_LPJ_T0072974.1 MGP_LPJ_G0029762.1 mouse_genomes_project 5 111380985 111403203 + MGP_LPJ_P0072974 Idua protein_coding nonsense_mediated_decay MGP_LPJ_T0072975.1 MGP_LPJ_G0029762.1 mouse_genomes_project 5 111381097 111391847 + Idua protein_coding processed_transcript MGP_LPJ_T0072980.1 MGP_LPJ_G0029762.1 mouse_genomes_project 5 111391120 111402169 + MGP_LPJ_P0072980 Idua protein_coding unknown_likely_coding MGP_LPJ_T0008354.1 MGP_LPJ_G0006791.1 mouse_genomes_project 5 123412820 123429239 + Gm16064 lincRNA lincRNA MGP_LPJ_T0015109.1 MGP_LPJ_G0013200.1 mouse_genomes_project 5 134815920 134816322 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098713.1 MGP_LPJ_G0036977.1 mouse_genomes_project 5 127790584 127796219 + Gm15751 sense_overlapping sense_overlapping MGP_LPJ_T0074081.1 MGP_LPJ_G0029976.1 mouse_genomes_project 5 127793893 127806294 - MGP_LPJ_P0074081 Diablo protein_coding nonsense_mediated_decay MGP_LPJ_T0074082.1 MGP_LPJ_G0029976.1 mouse_genomes_project 5 127794089 127806272 - MGP_LPJ_P0074082 Diablo protein_coding protein_coding MGP_LPJ_T0074083.1 MGP_LPJ_G0029976.1 mouse_genomes_project 5 127794270 127807581 - MGP_LPJ_P0074083 Diablo protein_coding nonsense_mediated_decay MGP_LPJ_T0074084.1 MGP_LPJ_G0029976.1 mouse_genomes_project 5 127797998 127806288 - MGP_LPJ_P0074084 Diablo protein_coding protein_coding MGP_LPJ_T0074085.1 MGP_LPJ_G0029976.1 mouse_genomes_project 5 127798453 127806285 - MGP_LPJ_P0074085 Diablo protein_coding protein_coding MGP_LPJ_T0074086.1 MGP_LPJ_G0029976.1 mouse_genomes_project 5 127799776 127806285 - MGP_LPJ_P0074086 Diablo protein_coding protein_coding MGP_LPJ_T0074087.1 MGP_LPJ_G0029976.1 mouse_genomes_project 5 127800127 127805647 - Diablo protein_coding retained_intron MGP_LPJ_T0074088.1 MGP_LPJ_G0029976.1 mouse_genomes_project 5 127800228 127802946 - Diablo protein_coding retained_intron MGP_LPJ_T0074089.1 MGP_LPJ_G0029976.1 mouse_genomes_project 5 127806649 127807640 - Diablo protein_coding processed_transcript MGP_LPJ_T0001893.1 MGP_LPJ_G0001804.1 mouse_genomes_project 5 137169298 137171604 - TEC TEC MGP_LPJ_T0015175.1 MGP_LPJ_G0013266.1 mouse_genomes_project 5 157920434 157920957 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014929.1 MGP_LPJ_G0013020.1 mouse_genomes_project 5 54116203 54125621 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001775.1 MGP_LPJ_G0001687.1 mouse_genomes_project 5 109764730 109766849 - TEC TEC MGP_LPJ_T0071436.1 MGP_LPJ_G0029441.1 mouse_genomes_project 5 49283110 49386638 - MGP_LPJ_P0071436 Adgra3 protein_coding protein_coding MGP_LPJ_T0071437.1 MGP_LPJ_G0029441.1 mouse_genomes_project 5 49289264 49295230 - Adgra3 protein_coding processed_transcript MGP_LPJ_T0071438.1 MGP_LPJ_G0029441.1 mouse_genomes_project 5 49310633 49324435 - Adgra3 protein_coding processed_transcript MGP_LPJ_T0071439.1 MGP_LPJ_G0029441.1 mouse_genomes_project 5 49330647 49333478 - Adgra3 protein_coding retained_intron MGP_LPJ_T0071440.1 MGP_LPJ_G0029441.1 mouse_genomes_project 5 49378021 49381012 - Adgra3 protein_coding retained_intron MGP_LPJ_T0071441.1 MGP_LPJ_G0029441.1 mouse_genomes_project 5 49378501 49386277 - Adgra3 protein_coding processed_transcript MGP_LPJ_T0071442.1 MGP_LPJ_G0029441.1 mouse_genomes_project 5 49385755 49386277 - Adgra3 protein_coding retained_intron MGP_LPJ_T0075638.1 MGP_LPJ_G0030268.1 mouse_genomes_project 5 151207180 151213918 - MGP_LPJ_P0075638 Zkscan14 protein_coding protein_coding MGP_LPJ_T0075639.1 MGP_LPJ_G0030268.1 mouse_genomes_project 5 151207857 151213907 - MGP_LPJ_P0075639 Zkscan14 protein_coding protein_coding MGP_LPJ_T0075640.1 MGP_LPJ_G0030268.1 mouse_genomes_project 5 151211679 151213918 - MGP_LPJ_P0075640 Zkscan14 protein_coding protein_coding MGP_LPJ_T0001867.1 MGP_LPJ_G0001778.1 mouse_genomes_project 5 134172398 134174614 + TEC TEC MGP_LPJ_T0015164.1 MGP_LPJ_G0013255.1 mouse_genomes_project 5 154202028 154202522 + processed_pseudogene processed_pseudogene MGP_LPJ_T0073538.1 MGP_LPJ_G0029878.1 mouse_genomes_project 5 119326949 119413427 + Cit protein_coding retained_intron MGP_LPJ_T0073539.1 MGP_LPJ_G0029878.1 mouse_genomes_project 5 119326951 119356873 + MGP_LPJ_P0073539 Cit protein_coding protein_coding MGP_LPJ_T0073540.1 MGP_LPJ_G0029878.1 mouse_genomes_project 5 119326952 119356891 + MGP_LPJ_P0073540 Cit protein_coding protein_coding MGP_LPJ_T0073541.1 MGP_LPJ_G0029878.1 mouse_genomes_project 5 119327315 119413434 + Cit protein_coding retained_intron MGP_LPJ_T0073542.1 MGP_LPJ_G0029878.1 mouse_genomes_project 5 119327315 119501260 + MGP_LPJ_P0073542 Cit protein_coding protein_coding MGP_LPJ_T0073543.1 MGP_LPJ_G0029878.1 mouse_genomes_project 5 119327315 119498609 + MGP_LPJ_P0073543 Cit protein_coding protein_coding MGP_LPJ_T0073544.1 MGP_LPJ_G0029878.1 mouse_genomes_project 5 119328042 119498584 + MGP_LPJ_P0073544 Cit protein_coding protein_coding MGP_LPJ_T0073545.1 MGP_LPJ_G0029878.1 mouse_genomes_project 5 119328042 119498584 + MGP_LPJ_P0073545 Cit protein_coding protein_coding MGP_LPJ_T0073546.1 MGP_LPJ_G0029878.1 mouse_genomes_project 5 119328132 119337631 + Cit protein_coding processed_transcript MGP_LPJ_T0073547.1 MGP_LPJ_G0029878.1 mouse_genomes_project 5 119332647 119345995 + Cit protein_coding retained_intron MGP_LPJ_T0073548.1 MGP_LPJ_G0029878.1 mouse_genomes_project 5 119370032 119371216 + Cit protein_coding retained_intron MGP_LPJ_T0073549.1 MGP_LPJ_G0029878.1 mouse_genomes_project 5 119395256 119413325 + Cit protein_coding retained_intron MGP_LPJ_T0073550.1 MGP_LPJ_G0029878.1 mouse_genomes_project 5 119413365 119499051 + Cit protein_coding processed_transcript MGP_LPJ_T0073551.1 MGP_LPJ_G0029878.1 mouse_genomes_project 5 119413810 119498624 + Cit protein_coding processed_transcript MGP_LPJ_T0073552.1 MGP_LPJ_G0029878.1 mouse_genomes_project 5 119414012 119501193 + MGP_LPJ_P0073552 Cit protein_coding unknown_likely_coding MGP_LPJ_T0073553.1 MGP_LPJ_G0029878.1 mouse_genomes_project 5 119421359 119434691 + Cit protein_coding processed_transcript MGP_LPJ_T0073554.1 MGP_LPJ_G0029878.1 mouse_genomes_project 5 119433054 119490944 + Cit protein_coding retained_intron MGP_LPJ_T0073555.1 MGP_LPJ_G0029878.1 mouse_genomes_project 5 119438805 119440365 + Cit protein_coding processed_transcript MGP_LPJ_T0073556.1 MGP_LPJ_G0029878.1 mouse_genomes_project 5 119455672 119498621 + MGP_LPJ_P0073556 Cit protein_coding nonsense_mediated_decay MGP_LPJ_T0073557.1 MGP_LPJ_G0029878.1 mouse_genomes_project 5 119475701 119479348 + Cit protein_coding retained_intron MGP_LPJ_T0098625.1 MGP_LPJ_G0036899.1 mouse_genomes_project 5 101526900 101527639 - Gm16227 sense_intronic sense_intronic MGP_LPJ_T0071303.1 MGP_LPJ_G0029423.1 mouse_genomes_project 5 42741974 42830030 + MGP_LPJ_P0071303 Cc2d2a protein_coding protein_coding MGP_LPJ_T0071304.1 MGP_LPJ_G0029423.1 mouse_genomes_project 5 42753709 42770462 + Cc2d2a protein_coding retained_intron MGP_LPJ_T0071305.1 MGP_LPJ_G0029423.1 mouse_genomes_project 5 42753709 42828375 + MGP_LPJ_P0071305 Cc2d2a protein_coding protein_coding MGP_LPJ_T0071306.1 MGP_LPJ_G0029423.1 mouse_genomes_project 5 42784225 42804639 + Cc2d2a protein_coding retained_intron MGP_LPJ_T0001649.1 MGP_LPJ_G0001563.1 mouse_genomes_project 5 62645440 62648749 - TEC TEC MGP_LPJ_T0075315.1 MGP_LPJ_G0030198.1 mouse_genomes_project 5 145663227 145995290 - MGP_LPJ_P0075315 Mad1l1 protein_coding protein_coding MGP_LPJ_T0075316.1 MGP_LPJ_G0030198.1 mouse_genomes_project 5 145663227 145995288 - MGP_LPJ_P0075316 Mad1l1 protein_coding nonsense_mediated_decay MGP_LPJ_T0075317.1 MGP_LPJ_G0030198.1 mouse_genomes_project 5 145663232 145834978 - Mad1l1 protein_coding processed_transcript MGP_LPJ_T0075318.1 MGP_LPJ_G0030198.1 mouse_genomes_project 5 145743586 145770380 - Mad1l1 protein_coding processed_transcript MGP_LPJ_T0075319.1 MGP_LPJ_G0030198.1 mouse_genomes_project 5 145802778 145834719 - Mad1l1 protein_coding processed_transcript MGP_LPJ_T0075320.1 MGP_LPJ_G0030198.1 mouse_genomes_project 5 145825888 145929497 - Mad1l1 protein_coding processed_transcript MGP_LPJ_T0070614.1 MGP_LPJ_G0029314.1 mouse_genomes_project 5 29597384 29623521 - Gtf3c2 protein_coding retained_intron MGP_LPJ_T0070615.1 MGP_LPJ_G0029314.1 mouse_genomes_project 5 29597384 29623533 - MGP_LPJ_P0070615 Gtf3c2 protein_coding protein_coding MGP_LPJ_T0070616.1 MGP_LPJ_G0029314.1 mouse_genomes_project 5 29597900 29623506 - MGP_LPJ_P0070616 Gtf3c2 protein_coding protein_coding MGP_LPJ_T0070617.1 MGP_LPJ_G0029314.1 mouse_genomes_project 5 29598823 29600761 - Gtf3c2 protein_coding retained_intron MGP_LPJ_T0070618.1 MGP_LPJ_G0029314.1 mouse_genomes_project 5 29600875 29607513 - Gtf3c2 protein_coding retained_intron MGP_LPJ_T0070619.1 MGP_LPJ_G0029314.1 mouse_genomes_project 5 29608510 29623298 - Gtf3c2 protein_coding retained_intron MGP_LPJ_T0070620.1 MGP_LPJ_G0029314.1 mouse_genomes_project 5 29616084 29623300 - Gtf3c2 protein_coding retained_intron MGP_LPJ_T0070621.1 MGP_LPJ_G0029314.1 mouse_genomes_project 5 29616404 29617892 - MGP_LPJ_P0070621 Gtf3c2 protein_coding protein_coding MGP_LPJ_T0070622.1 MGP_LPJ_G0029314.1 mouse_genomes_project 5 29616781 29623300 - MGP_LPJ_P0070622 Gtf3c2 protein_coding protein_coding MGP_LPJ_T0070623.1 MGP_LPJ_G0029314.1 mouse_genomes_project 5 29617194 29623238 - MGP_LPJ_P0070623 Gtf3c2 protein_coding protein_coding MGP_LPJ_T0070624.1 MGP_LPJ_G0029314.1 mouse_genomes_project 5 29617311 29618212 - MGP_LPJ_P0070624 Gtf3c2 protein_coding protein_coding MGP_LPJ_T0099618.1 MGP_LPJ_G0037881.1 mouse_genomes_project 5 127911257 127911404 + Gm24840 snRNA snRNA MGP_LPJ_T0001799.1 MGP_LPJ_G0001711.1 mouse_genomes_project 5 117396254 117398107 + TEC TEC MGP_LPJ_T0074452.1 MGP_LPJ_G0030038.1 mouse_genomes_project 5 134515951 134518693 + MGP_LPJ_P0074452 Nupr1l protein_coding nonsense_mediated_decay MGP_LPJ_T0074453.1 MGP_LPJ_G0030038.1 mouse_genomes_project 5 134515953 134521201 + MGP_LPJ_P0074453 Nupr1l protein_coding nonsense_mediated_decay MGP_LPJ_T0074454.1 MGP_LPJ_G0030038.1 mouse_genomes_project 5 134515979 134517806 + MGP_LPJ_P0074454 Nupr1l protein_coding protein_coding MGP_LPJ_T0074455.1 MGP_LPJ_G0030038.1 mouse_genomes_project 5 134518381 134518693 + Nupr1l protein_coding processed_transcript MGP_LPJ_T0070464.1 MGP_LPJ_G0029288.1 mouse_genomes_project 5 28711716 28757465 + MGP_LPJ_P0070464 Drc1 protein_coding protein_coding MGP_LPJ_T0070465.1 MGP_LPJ_G0029288.1 mouse_genomes_project 5 28723192 28724163 + Drc1 protein_coding processed_transcript MGP_LPJ_T0070466.1 MGP_LPJ_G0029288.1 mouse_genomes_project 5 28733466 28745277 + Drc1 protein_coding processed_transcript MGP_LPJ_T0070467.1 MGP_LPJ_G0029288.1 mouse_genomes_project 5 28742889 28745863 + Drc1 protein_coding processed_transcript MGP_LPJ_T0004888.1 MGP_LPJ_G0004206.1 mouse_genomes_project 5 142859990 142862388 + Gm36266 antisense antisense MGP_LPJ_T0008275.1 MGP_LPJ_G0006741.1 mouse_genomes_project 5 110290651 110319058 - Gm26692 lincRNA lincRNA MGP_LPJ_T0004805.1 MGP_LPJ_G0004145.1 mouse_genomes_project 5 116880018 116880738 + Gm15736 antisense antisense MGP_LPJ_T0010758.1 MGP_LPJ_G0008876.1 mouse_genomes_project 5 146824867 146824946 + Gm26113 miRNA miRNA MGP_LPJ_T0098271.1 MGP_LPJ_G0036552.1 mouse_genomes_project 5 65243943 65244062 + Gm25154 rRNA rRNA MGP_LPJ_T0008154.1 MGP_LPJ_G0006648.1 mouse_genomes_project 5 58166276 58169029 + 1700029E06Rik lincRNA lincRNA MGP_LPJ_T0075593.1 MGP_LPJ_G0030258.1 mouse_genomes_project 5 151027624 151029304 + MGP_LPJ_P0075593 1700018F24Rik protein_coding protein_coding MGP_LPJ_T0015141.1 MGP_LPJ_G0013232.1 mouse_genomes_project 5 149386172 149386709 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001828.1 MGP_LPJ_G0001740.1 mouse_genomes_project 5 125402102 125403968 + TEC TEC MGP_LPJ_T0072290.1 MGP_LPJ_G0029612.1 mouse_genomes_project 5 90062395 90080996 - MGP_LPJ_P0072290 Grsf1 protein_coding protein_coding MGP_LPJ_T0072291.1 MGP_LPJ_G0029612.1 mouse_genomes_project 5 90062611 90081670 - MGP_LPJ_P0072291 Grsf1 protein_coding protein_coding MGP_LPJ_T0072292.1 MGP_LPJ_G0029612.1 mouse_genomes_project 5 90065702 90076706 - Grsf1 protein_coding retained_intron MGP_LPJ_T0072293.1 MGP_LPJ_G0029612.1 mouse_genomes_project 5 90079206 90080698 - Grsf1 protein_coding processed_transcript MGP_LPJ_T0072073.1 MGP_LPJ_G0029552.1 mouse_genomes_project 5 77625623 77652835 + MGP_LPJ_P0072073 Srp72 protein_coding protein_coding MGP_LPJ_T0072074.1 MGP_LPJ_G0029552.1 mouse_genomes_project 5 77625647 77651714 + MGP_LPJ_P0072074 Srp72 protein_coding protein_coding MGP_LPJ_T0072075.1 MGP_LPJ_G0029552.1 mouse_genomes_project 5 77625661 77632486 + Srp72 protein_coding retained_intron MGP_LPJ_T0072076.1 MGP_LPJ_G0029552.1 mouse_genomes_project 5 77632474 77634610 + Srp72 protein_coding retained_intron MGP_LPJ_T0072077.1 MGP_LPJ_G0029552.1 mouse_genomes_project 5 77635990 77648044 + Srp72 protein_coding retained_intron MGP_LPJ_T0072078.1 MGP_LPJ_G0029552.1 mouse_genomes_project 5 77646890 77647801 + Srp72 protein_coding retained_intron MGP_LPJ_T0072079.1 MGP_LPJ_G0029552.1 mouse_genomes_project 5 77648154 77650387 + Srp72 protein_coding retained_intron MGP_LPJ_T0072080.1 MGP_LPJ_G0029552.1 mouse_genomes_project 5 77649871 77652835 + Srp72 protein_coding retained_intron MGP_LPJ_T0072081.1 MGP_LPJ_G0029552.1 mouse_genomes_project 5 77650302 77651239 + Srp72 protein_coding retained_intron MGP_LPJ_T0015166.1 MGP_LPJ_G0013257.1 mouse_genomes_project 5 154601302 154602781 - processed_pseudogene processed_pseudogene MGP_LPJ_T0071066.1 MGP_LPJ_G0029380.1 mouse_genomes_project 5 34279293 34296949 - MGP_LPJ_P0071066 Trmt44 protein_coding protein_coding MGP_LPJ_T0071067.1 MGP_LPJ_G0029380.1 mouse_genomes_project 5 34294374 34296930 - Trmt44 protein_coding retained_intron MGP_LPJ_T0071068.1 MGP_LPJ_G0029380.1 mouse_genomes_project 5 34294626 34296553 - MGP_LPJ_P0071068 Trmt44 protein_coding protein_coding MGP_LPJ_T0072390.1 MGP_LPJ_G0029642.1 mouse_genomes_project 5 93525200 93566165 - MGP_LPJ_P0072390 Cdkl2 protein_coding protein_coding MGP_LPJ_T0072391.1 MGP_LPJ_G0029642.1 mouse_genomes_project 5 93525200 93566166 - MGP_LPJ_P0072391 Cdkl2 protein_coding protein_coding MGP_LPJ_T0072392.1 MGP_LPJ_G0029642.1 mouse_genomes_project 5 93526930 93565820 - MGP_LPJ_P0072392 Cdkl2 protein_coding protein_coding MGP_LPJ_T0072393.1 MGP_LPJ_G0029642.1 mouse_genomes_project 5 93526949 93565796 - MGP_LPJ_P0072393 Cdkl2 protein_coding protein_coding MGP_LPJ_T0072394.1 MGP_LPJ_G0029642.1 mouse_genomes_project 5 93527162 93539109 - Cdkl2 protein_coding retained_intron MGP_LPJ_T0072395.1 MGP_LPJ_G0029642.1 mouse_genomes_project 5 93543799 93553126 - MGP_LPJ_P0072395 Cdkl2 protein_coding protein_coding MGP_LPJ_T0072396.1 MGP_LPJ_G0029642.1 mouse_genomes_project 5 93565390 93567017 - Cdkl2 protein_coding TEC MGP_LPJ_T0099593.1 MGP_LPJ_G0037856.1 mouse_genomes_project 5 87313514 87313684 + Gm24524 snRNA snRNA MGP_LPJ_T0072504.1 MGP_LPJ_G0029662.1 mouse_genomes_project 5 94853816 94862779 + MGP_LPJ_P0072504 Ccng2 protein_coding protein_coding MGP_LPJ_T0072505.1 MGP_LPJ_G0029662.1 mouse_genomes_project 5 94854148 94855016 + Ccng2 protein_coding processed_transcript MGP_LPJ_T0072506.1 MGP_LPJ_G0029662.1 mouse_genomes_project 5 94854160 94856277 + Ccng2 protein_coding processed_transcript MGP_LPJ_T0072507.1 MGP_LPJ_G0029662.1 mouse_genomes_project 5 94854198 94862773 + Ccng2 protein_coding retained_intron MGP_LPJ_T0072508.1 MGP_LPJ_G0029662.1 mouse_genomes_project 5 94854873 94862772 + MGP_LPJ_P0072508 Ccng2 protein_coding protein_coding MGP_LPJ_T0072509.1 MGP_LPJ_G0029662.1 mouse_genomes_project 5 94855268 94860039 + Ccng2 protein_coding retained_intron MGP_LPJ_T0014995.1 MGP_LPJ_G0013086.1 mouse_genomes_project 5 80299707 80299725 + processed_pseudogene processed_pseudogene MGP_LPJ_T0075612.1 MGP_LPJ_G0030263.1 mouse_genomes_project 5 151138145 151149751 - MGP_LPJ_P0075612 Pdap1 protein_coding protein_coding MGP_LPJ_T0075613.1 MGP_LPJ_G0030263.1 mouse_genomes_project 5 151140024 151146223 - Pdap1 protein_coding processed_transcript MGP_LPJ_T0075614.1 MGP_LPJ_G0030263.1 mouse_genomes_project 5 151141311 151145434 - Pdap1 protein_coding retained_intron MGP_LPJ_T0075615.1 MGP_LPJ_G0030263.1 mouse_genomes_project 5 151143141 151145494 - Pdap1 protein_coding retained_intron MGP_LPJ_T0075616.1 MGP_LPJ_G0030263.1 mouse_genomes_project 5 151146104 151149511 - Pdap1 protein_coding retained_intron MGP_LPJ_T0098633.1 MGP_LPJ_G0036907.1 mouse_genomes_project 5 134349181 134350521 + Gm15903 sense_intronic sense_intronic MGP_LPJ_T0098634.1 MGP_LPJ_G0036907.1 mouse_genomes_project 5 134350307 134353830 + Gm15903 sense_intronic sense_intronic MGP_LPJ_T0015171.1 MGP_LPJ_G0013262.1 mouse_genomes_project 5 156829924 156830312 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008213.1 MGP_LPJ_G0006694.1 mouse_genomes_project 5 92391052 92393223 + Gm42530 lincRNA lincRNA MGP_LPJ_T0101346.1 MGP_LPJ_G0039551.1 mouse_genomes_project 5 20926648 20927211 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0072264.1 MGP_LPJ_G0029600.1 mouse_genomes_project 5 89390373 89396334 + MGP_LPJ_P0072264 Smr3a protein_coding protein_coding MGP_LPJ_T0072265.1 MGP_LPJ_G0029600.1 mouse_genomes_project 5 89390377 89396337 + MGP_LPJ_P0072265 Smr3a protein_coding protein_coding MGP_LPJ_T0075844.1 MGP_LPJ_G0030312.1 mouse_genomes_project 5 156593591 156643520 + Rxfp2 protein_coding retained_intron MGP_LPJ_T0075845.1 MGP_LPJ_G0030312.1 mouse_genomes_project 5 156593591 156659389 + MGP_LPJ_P0075845 Rxfp2 protein_coding protein_coding MGP_LPJ_T0075846.1 MGP_LPJ_G0030312.1 mouse_genomes_project 5 156593591 156659389 + MGP_LPJ_P0075846 Rxfp2 protein_coding protein_coding MGP_LPJ_T0075847.1 MGP_LPJ_G0030312.1 mouse_genomes_project 5 156593622 156659381 + MGP_LPJ_P0075847 Rxfp2 protein_coding protein_coding MGP_LPJ_T0075848.1 MGP_LPJ_G0030312.1 mouse_genomes_project 5 156641336 156644822 + Rxfp2 protein_coding retained_intron MGP_LPJ_T0075849.1 MGP_LPJ_G0030312.1 mouse_genomes_project 5 156658728 156660237 + Rxfp2 protein_coding processed_transcript MGP_LPJ_T0004672.1 MGP_LPJ_G0004047.1 mouse_genomes_project 5 23040606 23044980 + antisense antisense MGP_LPJ_T0014924.1 MGP_LPJ_G0013015.1 mouse_genomes_project 5 49862730 49863472 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001912.1 MGP_LPJ_G0001822.1 mouse_genomes_project 5 141409379 141413837 - TEC TEC MGP_LPJ_T0099562.1 MGP_LPJ_G0037825.1 mouse_genomes_project 5 28913982 28914089 - Gm25666 snRNA snRNA MGP_LPJ_T0001819.1 MGP_LPJ_G0001731.1 mouse_genomes_project 5 122380578 122382247 + TEC TEC MGP_LPJ_T0015036.1 MGP_LPJ_G0013127.1 mouse_genomes_project 5 102613935 102614369 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001692.1 MGP_LPJ_G0001605.1 mouse_genomes_project 5 67910694 67912324 - TEC TEC MGP_LPJ_T0001906.1 MGP_LPJ_G0001816.1 mouse_genomes_project 5 139405838 139407303 - TEC TEC MGP_LPJ_T0014951.1 MGP_LPJ_G0013042.1 mouse_genomes_project 5 61241996 61242834 - processed_pseudogene processed_pseudogene MGP_LPJ_T0071119.1 MGP_LPJ_G0029388.1 mouse_genomes_project 5 35247658 35256780 + MGP_LPJ_P0071119 Grpel1 protein_coding protein_coding MGP_LPJ_T0001792.1 MGP_LPJ_G0001704.1 mouse_genomes_project 5 116318394 116320281 - TEC TEC MGP_LPJ_T0070404.1 MGP_LPJ_G0029276.1 mouse_genomes_project 5 27845894 27851313 - MGP_LPJ_P0070404 Mnx1 protein_coding protein_coding MGP_LPJ_T0070405.1 MGP_LPJ_G0029276.1 mouse_genomes_project 5 27846121 27851313 - MGP_LPJ_P0070405 Mnx1 protein_coding protein_coding MGP_LPJ_T0004745.1 MGP_LPJ_G0004106.1 mouse_genomes_project 5 77583528 77584006 + 2310040G07Rik antisense antisense MGP_LPJ_T0004746.1 MGP_LPJ_G0004106.1 mouse_genomes_project 5 77583768 77598845 + 2310040G07Rik antisense antisense MGP_LPJ_T0070868.1 MGP_LPJ_G0029352.1 mouse_genomes_project 5 32340044 32348208 + MGP_LPJ_P0070868 Fgfr3 protein_coding protein_coding MGP_LPJ_T0070869.1 MGP_LPJ_G0029352.1 mouse_genomes_project 5 32340094 32355439 + MGP_LPJ_P0070869 Fgfr3 protein_coding protein_coding MGP_LPJ_T0070870.1 MGP_LPJ_G0029352.1 mouse_genomes_project 5 32340094 32355439 + MGP_LPJ_P0070870 Fgfr3 protein_coding protein_coding MGP_LPJ_T0070871.1 MGP_LPJ_G0029352.1 mouse_genomes_project 5 32340094 32355438 + MGP_LPJ_P0070871 Fgfr3 protein_coding protein_coding MGP_LPJ_T0070872.1 MGP_LPJ_G0029352.1 mouse_genomes_project 5 32340161 32355434 + MGP_LPJ_P0070872 Fgfr3 protein_coding protein_coding MGP_LPJ_T0070873.1 MGP_LPJ_G0029352.1 mouse_genomes_project 5 32340168 32353978 + MGP_LPJ_P0070873 Fgfr3 protein_coding protein_coding MGP_LPJ_T0070874.1 MGP_LPJ_G0029352.1 mouse_genomes_project 5 32340676 32355439 + MGP_LPJ_P0070874 Fgfr3 protein_coding protein_coding MGP_LPJ_T0070875.1 MGP_LPJ_G0029352.1 mouse_genomes_project 5 32340676 32355439 + MGP_LPJ_P0070875 Fgfr3 protein_coding protein_coding MGP_LPJ_T0070876.1 MGP_LPJ_G0029352.1 mouse_genomes_project 5 32340814 32348377 + MGP_LPJ_P0070876 Fgfr3 protein_coding protein_coding MGP_LPJ_T0070877.1 MGP_LPJ_G0029352.1 mouse_genomes_project 5 32341190 32351161 + Fgfr3 protein_coding retained_intron MGP_LPJ_T0070878.1 MGP_LPJ_G0029352.1 mouse_genomes_project 5 32342142 32348221 + MGP_LPJ_P0070878 Fgfr3 protein_coding protein_coding MGP_LPJ_T0070879.1 MGP_LPJ_G0029352.1 mouse_genomes_project 5 32348108 32351114 + MGP_LPJ_P0070879 Fgfr3 protein_coding protein_coding MGP_LPJ_T0070880.1 MGP_LPJ_G0029352.1 mouse_genomes_project 5 32348334 32351654 + Fgfr3 protein_coding retained_intron MGP_LPJ_T0070881.1 MGP_LPJ_G0029352.1 mouse_genomes_project 5 32348591 32352132 + MGP_LPJ_P0070881 Fgfr3 protein_coding protein_coding MGP_LPJ_T0070882.1 MGP_LPJ_G0029352.1 mouse_genomes_project 5 32351622 32353223 + MGP_LPJ_P0070882 Fgfr3 protein_coding protein_coding MGP_LPJ_T0070883.1 MGP_LPJ_G0029352.1 mouse_genomes_project 5 32352062 32353284 + Fgfr3 protein_coding retained_intron MGP_LPJ_T0070884.1 MGP_LPJ_G0029352.1 mouse_genomes_project 5 32352975 32353935 + Fgfr3 protein_coding retained_intron MGP_LPJ_T0008068.1 MGP_LPJ_G0006588.1 mouse_genomes_project 5 20714645 20722661 - A930003O13Rik lincRNA lincRNA MGP_LPJ_T0008069.1 MGP_LPJ_G0006588.1 mouse_genomes_project 5 20715107 20718243 - A930003O13Rik lincRNA lincRNA MGP_LPJ_T0008070.1 MGP_LPJ_G0006588.1 mouse_genomes_project 5 20719795 20722681 - A930003O13Rik lincRNA lincRNA MGP_LPJ_T0001742.1 MGP_LPJ_G0001654.1 mouse_genomes_project 5 93725022 93725580 - TEC TEC MGP_LPJ_T0014988.1 MGP_LPJ_G0013079.1 mouse_genomes_project 5 77076119 77077193 - processed_pseudogene processed_pseudogene MGP_LPJ_T0070252.1 MGP_LPJ_G0029243.1 mouse_genomes_project 5 22570872 22577626 - MGP_LPJ_P0070252 Fastk protein_coding protein_coding MGP_LPJ_T0070253.1 MGP_LPJ_G0029243.1 mouse_genomes_project 5 22570873 22577618 - Fastk protein_coding retained_intron MGP_LPJ_T0070255.1 MGP_LPJ_G0029243.1 mouse_genomes_project 5 22573471 22574648 - Fastk protein_coding retained_intron MGP_LPJ_T0070256.1 MGP_LPJ_G0029243.1 mouse_genomes_project 5 22573471 22577638 - MGP_LPJ_P0070256 Fastk protein_coding nonsense_mediated_decay MGP_LPJ_T0070257.1 MGP_LPJ_G0029243.1 mouse_genomes_project 5 22573471 22577719 - MGP_LPJ_P0070257 Fastk protein_coding protein_coding MGP_LPJ_T0070258.1 MGP_LPJ_G0029243.1 mouse_genomes_project 5 22573472 22577619 - Fastk protein_coding retained_intron MGP_LPJ_T0070259.1 MGP_LPJ_G0029243.1 mouse_genomes_project 5 22573472 22573957 - Fastk protein_coding retained_intron MGP_LPJ_T0070260.1 MGP_LPJ_G0029243.1 mouse_genomes_project 5 22573475 22577640 - MGP_LPJ_P0070260 Fastk protein_coding protein_coding MGP_LPJ_T0070261.1 MGP_LPJ_G0029243.1 mouse_genomes_project 5 22573960 22574534 - Fastk protein_coding retained_intron MGP_LPJ_T0070262.1 MGP_LPJ_G0029243.1 mouse_genomes_project 5 22574052 22574731 - Fastk protein_coding processed_transcript MGP_LPJ_T0070263.1 MGP_LPJ_G0029243.1 mouse_genomes_project 5 22574356 22576391 - Fastk protein_coding retained_intron MGP_LPJ_T0070264.1 MGP_LPJ_G0029243.1 mouse_genomes_project 5 22574503 22577670 - Fastk protein_coding processed_transcript MGP_LPJ_T0070265.1 MGP_LPJ_G0029243.1 mouse_genomes_project 5 22575733 22577640 - Fastk protein_coding retained_intron MGP_LPJ_T0070266.1 MGP_LPJ_G0029243.1 mouse_genomes_project 5 22575801 22577629 - Fastk protein_coding processed_transcript MGP_LPJ_T0070267.1 MGP_LPJ_G0029243.1 mouse_genomes_project 5 22576363 22577629 - Fastk protein_coding processed_transcript MGP_LPJ_T0014918.1 MGP_LPJ_G0013009.1 mouse_genomes_project 5 46950000 46950448 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004789.1 MGP_LPJ_G0004133.1 mouse_genomes_project 5 110023313 110050375 - Gm17202 antisense antisense MGP_LPJ_T0010746.1 MGP_LPJ_G0008864.1 mouse_genomes_project 5 142134988 142135097 + Mir702 miRNA miRNA MGP_LPJ_T0008432.1 MGP_LPJ_G0006838.1 mouse_genomes_project 5 142726626 142727582 + 9130604C24Rik lincRNA lincRNA MGP_LPJ_T0102195.1 MGP_LPJ_G0040232.1 mouse_genomes_project 5 142146888 142150579 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0073697.1 MGP_LPJ_G0029908.1 mouse_genomes_project 5 124422560 124446576 + MGP_LPJ_P0073697 Iqcd protein_coding protein_coding MGP_LPJ_T0073698.1 MGP_LPJ_G0029908.1 mouse_genomes_project 5 124422567 124446580 + MGP_LPJ_P0073698 Iqcd protein_coding protein_coding MGP_LPJ_T0071448.1 MGP_LPJ_G0029443.1 mouse_genomes_project 5 51572671 51612967 - MGP_LPJ_P0071448 Dhx15 protein_coding protein_coding MGP_LPJ_T0071449.1 MGP_LPJ_G0029443.1 mouse_genomes_project 5 51573161 51612830 - MGP_LPJ_P0071449 Dhx15 protein_coding nonsense_mediated_decay MGP_LPJ_T0071450.1 MGP_LPJ_G0029443.1 mouse_genomes_project 5 51575792 51580271 - Dhx15 protein_coding retained_intron MGP_LPJ_T0071451.1 MGP_LPJ_G0029443.1 mouse_genomes_project 5 51576194 51612942 - MGP_LPJ_P0071451 Dhx15 protein_coding protein_coding MGP_LPJ_T0071452.1 MGP_LPJ_G0029443.1 mouse_genomes_project 5 51581132 51584101 - Dhx15 protein_coding retained_intron MGP_LPJ_T0071453.1 MGP_LPJ_G0029443.1 mouse_genomes_project 5 51589226 51612947 - MGP_LPJ_P0071453 Dhx15 protein_coding protein_coding MGP_LPJ_T0071454.1 MGP_LPJ_G0029443.1 mouse_genomes_project 5 51607276 51609876 - Dhx15 protein_coding retained_intron MGP_LPJ_T0001900.1 MGP_LPJ_G0001811.1 mouse_genomes_project 5 138284131 138285053 + TEC TEC MGP_LPJ_T0008169.1 MGP_LPJ_G0006659.1 mouse_genomes_project 5 64691883 64693622 + Gm42565 lincRNA lincRNA MGP_LPJ_T0073147.1 MGP_LPJ_G0029802.1 mouse_genomes_project 5 115387216 115393587 - MGP_LPJ_P0073147 Cryba4 protein_coding protein_coding MGP_LPJ_T0073148.1 MGP_LPJ_G0029802.1 mouse_genomes_project 5 115387217 115392243 - MGP_LPJ_P0073148 Cryba4 protein_coding protein_coding MGP_LPJ_T0073149.1 MGP_LPJ_G0029802.1 mouse_genomes_project 5 115387256 115392883 - MGP_LPJ_P0073149 Cryba4 protein_coding protein_coding MGP_LPJ_T0099610.1 MGP_LPJ_G0037873.1 mouse_genomes_project 5 117190031 117190112 - Gm22056 snRNA snRNA MGP_LPJ_T0014936.1 MGP_LPJ_G0013027.1 mouse_genomes_project 5 56877857 56879207 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102185.1 MGP_LPJ_G0040222.1 mouse_genomes_project 5 88721913 88725792 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0072829.1 MGP_LPJ_G0029735.1 mouse_genomes_project 5 109947608 110005223 + MGP_LPJ_P0072829 protein_coding protein_coding MGP_LPJ_T0072830.1 MGP_LPJ_G0029735.1 mouse_genomes_project 5 109947624 109967195 + MGP_LPJ_P0072830 protein_coding protein_coding MGP_LPJ_T0072831.1 MGP_LPJ_G0029735.1 mouse_genomes_project 5 109947641 109958529 + protein_coding processed_transcript MGP_LPJ_T0072832.1 MGP_LPJ_G0029735.1 mouse_genomes_project 5 109986121 110004472 + protein_coding processed_transcript MGP_LPJ_T0008341.1 MGP_LPJ_G0006780.1 mouse_genomes_project 5 120358093 120360272 + Gm29926 lincRNA lincRNA MGP_LPJ_T0004654.1 MGP_LPJ_G0004032.1 mouse_genomes_project 5 482488 484434 - 4833413G10Rik antisense antisense MGP_LPJ_T0010694.1 MGP_LPJ_G0008812.1 mouse_genomes_project 5 33235631 33235694 + Mir7036b miRNA miRNA MGP_LPJ_T0018117.1 MGP_LPJ_G0015523.1 mouse_genomes_project 5 92007726 92044630 - Gm43448 processed_transcript processed_transcript MGP_LPJ_T0018118.1 MGP_LPJ_G0015523.1 mouse_genomes_project 5 92025601 92044650 - Gm43448 processed_transcript processed_transcript MGP_LPJ_T0070019.1 MGP_LPJ_G0029200.1 mouse_genomes_project 5 11638450 11870744 + Sema3e protein_coding retained_intron MGP_LPJ_T0070020.1 MGP_LPJ_G0029200.1 mouse_genomes_project 5 11638450 11873134 + MGP_LPJ_P0070020 Sema3e protein_coding protein_coding MGP_LPJ_T0070021.1 MGP_LPJ_G0029200.1 mouse_genomes_project 5 11846047 11847897 + Sema3e protein_coding retained_intron MGP_LPJ_T0075712.1 MGP_LPJ_G0030289.1 mouse_genomes_project 5 153396572 153398606 + MGP_LPJ_P0075712 Polr1d protein_coding protein_coding MGP_LPJ_T0075713.1 MGP_LPJ_G0030289.1 mouse_genomes_project 5 153396868 153431641 + MGP_LPJ_P0075713 Polr1d protein_coding protein_coding MGP_LPJ_T0075714.1 MGP_LPJ_G0030289.1 mouse_genomes_project 5 153397070 153431877 + MGP_LPJ_P0075714 Polr1d protein_coding protein_coding MGP_LPJ_T0075715.1 MGP_LPJ_G0030289.1 mouse_genomes_project 5 153397086 153431854 + MGP_LPJ_P0075715 Polr1d protein_coding nonsense_mediated_decay MGP_LPJ_T0075716.1 MGP_LPJ_G0030289.1 mouse_genomes_project 5 153421397 153431151 + Polr1d protein_coding retained_intron MGP_LPJ_T0075717.1 MGP_LPJ_G0030289.1 mouse_genomes_project 5 153425634 153431267 + Polr1d protein_coding processed_transcript MGP_LPJ_T0015064.1 MGP_LPJ_G0013155.1 mouse_genomes_project 5 110811333 110813015 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001854.1 MGP_LPJ_G0001765.1 mouse_genomes_project 5 128893813 128895177 + TEC TEC MGP_LPJ_T0072759.1 MGP_LPJ_G0029722.1 mouse_genomes_project 5 107489910 107551156 - Gbp8 protein_coding processed_transcript MGP_LPJ_T0072760.1 MGP_LPJ_G0029722.1 mouse_genomes_project 5 107489913 107518261 - MGP_LPJ_P0072760 Gbp8 protein_coding protein_coding MGP_LPJ_T0072761.1 MGP_LPJ_G0029722.1 mouse_genomes_project 5 107490658 107518123 - MGP_LPJ_P0072761 Gbp8 protein_coding protein_coding MGP_LPJ_T0074947.1 MGP_LPJ_G0030126.1 mouse_genomes_project 5 142491434 142503452 - MGP_LPJ_P0074947 Srrt protein_coding protein_coding MGP_LPJ_T0074948.1 MGP_LPJ_G0030126.1 mouse_genomes_project 5 142491441 142503444 - MGP_LPJ_P0074948 Srrt protein_coding protein_coding MGP_LPJ_T0074949.1 MGP_LPJ_G0030126.1 mouse_genomes_project 5 142491445 142503444 - MGP_LPJ_P0074949 Srrt protein_coding protein_coding MGP_LPJ_T0074950.1 MGP_LPJ_G0030126.1 mouse_genomes_project 5 142491447 142503166 - MGP_LPJ_P0074950 Srrt protein_coding nonsense_mediated_decay MGP_LPJ_T0074951.1 MGP_LPJ_G0030126.1 mouse_genomes_project 5 142491455 142495376 - MGP_LPJ_P0074951 Srrt protein_coding protein_coding MGP_LPJ_T0074952.1 MGP_LPJ_G0030126.1 mouse_genomes_project 5 142491717 142493156 - MGP_LPJ_P0074952 Srrt protein_coding protein_coding MGP_LPJ_T0074953.1 MGP_LPJ_G0030126.1 mouse_genomes_project 5 142491748 142492665 - Srrt protein_coding retained_intron MGP_LPJ_T0074954.1 MGP_LPJ_G0030126.1 mouse_genomes_project 5 142491966 142492948 - Srrt protein_coding retained_intron MGP_LPJ_T0074955.1 MGP_LPJ_G0030126.1 mouse_genomes_project 5 142492009 142492584 - Srrt protein_coding retained_intron MGP_LPJ_T0074956.1 MGP_LPJ_G0030126.1 mouse_genomes_project 5 142492197 142493298 - Srrt protein_coding retained_intron MGP_LPJ_T0074957.1 MGP_LPJ_G0030126.1 mouse_genomes_project 5 142493354 142494278 - Srrt protein_coding retained_intron MGP_LPJ_T0074958.1 MGP_LPJ_G0030126.1 mouse_genomes_project 5 142493562 142495740 - MGP_LPJ_P0074958 Srrt protein_coding nonsense_mediated_decay MGP_LPJ_T0074959.1 MGP_LPJ_G0030126.1 mouse_genomes_project 5 142493562 142496049 - MGP_LPJ_P0074959 Srrt protein_coding nonsense_mediated_decay MGP_LPJ_T0074960.1 MGP_LPJ_G0030126.1 mouse_genomes_project 5 142493989 142495617 - Srrt protein_coding retained_intron MGP_LPJ_T0074961.1 MGP_LPJ_G0030126.1 mouse_genomes_project 5 142495316 142503218 - Srrt protein_coding retained_intron MGP_LPJ_T0074962.1 MGP_LPJ_G0030126.1 mouse_genomes_project 5 142495603 142496462 - Srrt protein_coding retained_intron MGP_LPJ_T0074963.1 MGP_LPJ_G0030126.1 mouse_genomes_project 5 142498384 142503418 - MGP_LPJ_P0074963 Srrt protein_coding nonsense_mediated_decay MGP_LPJ_T0004838.1 MGP_LPJ_G0004167.1 mouse_genomes_project 5 124636109 124680718 + antisense antisense MGP_LPJ_T0001506.1 MGP_LPJ_G0001423.1 mouse_genomes_project 5 22582039 22584141 - TEC TEC MGP_LPJ_T0001507.1 MGP_LPJ_G0001423.1 mouse_genomes_project 5 22583605 22584139 - TEC TEC MGP_LPJ_T0014888.1 MGP_LPJ_G0012979.1 mouse_genomes_project 5 31657720 31658753 + processed_pseudogene processed_pseudogene MGP_LPJ_T0074775.1 MGP_LPJ_G0030094.1 mouse_genomes_project 5 140797699 140809713 + MGP_LPJ_P0074775 Mdh2 protein_coding protein_coding MGP_LPJ_T0074776.1 MGP_LPJ_G0030094.1 mouse_genomes_project 5 140797855 140799473 + Mdh2 protein_coding retained_intron MGP_LPJ_T0074777.1 MGP_LPJ_G0030094.1 mouse_genomes_project 5 140797881 140809720 + MGP_LPJ_P0074777 Mdh2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074778.1 MGP_LPJ_G0030094.1 mouse_genomes_project 5 140797896 140803857 + Mdh2 protein_coding retained_intron MGP_LPJ_T0074779.1 MGP_LPJ_G0030094.1 mouse_genomes_project 5 140797904 140806894 + MGP_LPJ_P0074779 Mdh2 protein_coding protein_coding MGP_LPJ_T0074780.1 MGP_LPJ_G0030094.1 mouse_genomes_project 5 140797908 140805589 + MGP_LPJ_P0074780 Mdh2 protein_coding protein_coding MGP_LPJ_T0074781.1 MGP_LPJ_G0030094.1 mouse_genomes_project 5 140797941 140802984 + Mdh2 protein_coding retained_intron MGP_LPJ_T0015146.1 MGP_LPJ_G0013237.1 mouse_genomes_project 5 151280845 151281344 - processed_pseudogene processed_pseudogene MGP_LPJ_T0074919.1 MGP_LPJ_G0030118.1 mouse_genomes_project 5 142174415 142181445 + MGP_LPJ_P0074919 Vgf protein_coding protein_coding MGP_LPJ_T0074920.1 MGP_LPJ_G0030118.1 mouse_genomes_project 5 142178388 142181445 + MGP_LPJ_P0074920 Vgf protein_coding protein_coding MGP_LPJ_T0074921.1 MGP_LPJ_G0030118.1 mouse_genomes_project 5 142178457 142181122 + MGP_LPJ_P0074921 Vgf protein_coding protein_coding MGP_LPJ_T0074922.1 MGP_LPJ_G0030118.1 mouse_genomes_project 5 142178794 142179501 + MGP_LPJ_P0074922 Vgf protein_coding protein_coding MGP_LPJ_T0014842.1 MGP_LPJ_G0012933.1 mouse_genomes_project 5 20541396 20541692 + processed_pseudogene processed_pseudogene MGP_LPJ_T0074821.1 MGP_LPJ_G0030103.1 mouse_genomes_project 5 141131013 141163457 + MGP_LPJ_P0074821 Rasa4 protein_coding protein_coding MGP_LPJ_T0074822.1 MGP_LPJ_G0030103.1 mouse_genomes_project 5 141131030 141163458 + Rasa4 protein_coding retained_intron MGP_LPJ_T0074823.1 MGP_LPJ_G0030103.1 mouse_genomes_project 5 141131074 141163453 + Rasa4 protein_coding retained_intron MGP_LPJ_T0074824.1 MGP_LPJ_G0030103.1 mouse_genomes_project 5 141131074 141161437 + Rasa4 protein_coding retained_intron MGP_LPJ_T0074825.1 MGP_LPJ_G0030103.1 mouse_genomes_project 5 141131075 141144603 + Rasa4 protein_coding retained_intron MGP_LPJ_T0074826.1 MGP_LPJ_G0030103.1 mouse_genomes_project 5 141131094 141163453 + Rasa4 protein_coding retained_intron MGP_LPJ_T0074827.1 MGP_LPJ_G0030103.1 mouse_genomes_project 5 141131108 141163457 + MGP_LPJ_P0074827 Rasa4 protein_coding protein_coding MGP_LPJ_T0074828.1 MGP_LPJ_G0030103.1 mouse_genomes_project 5 141131165 141158987 + Rasa4 protein_coding retained_intron MGP_LPJ_T0074829.1 MGP_LPJ_G0030103.1 mouse_genomes_project 5 141132146 141142364 + Rasa4 protein_coding processed_transcript MGP_LPJ_T0074830.1 MGP_LPJ_G0030103.1 mouse_genomes_project 5 141142201 141143671 + Rasa4 protein_coding retained_intron MGP_LPJ_T0074831.1 MGP_LPJ_G0030103.1 mouse_genomes_project 5 141146861 141153771 + MGP_LPJ_P0074831 Rasa4 protein_coding nonsense_mediated_decay MGP_LPJ_T0074832.1 MGP_LPJ_G0030103.1 mouse_genomes_project 5 141155369 141157509 + MGP_LPJ_P0074832 Rasa4 protein_coding protein_coding MGP_LPJ_T0074833.1 MGP_LPJ_G0030103.1 mouse_genomes_project 5 141162411 141163010 + Rasa4 protein_coding retained_intron MGP_LPJ_T0011611.1 MGP_LPJ_G0009729.1 mouse_genomes_project 5 93500473 93500749 + Gm24113 misc_RNA misc_RNA MGP_LPJ_T0010711.1 MGP_LPJ_G0008829.1 mouse_genomes_project 5 82712750 82712831 + Gm22048 miRNA miRNA MGP_LPJ_T0008249.1 MGP_LPJ_G0006722.1 mouse_genomes_project 5 103857234 103864207 - Gm43271 lincRNA lincRNA MGP_LPJ_T0001902.1 MGP_LPJ_G0001813.1 mouse_genomes_project 5 139028547 139029911 + TEC TEC MGP_LPJ_T0001903.1 MGP_LPJ_G0001813.1 mouse_genomes_project 5 139028559 139029158 + TEC TEC MGP_LPJ_T0014952.1 MGP_LPJ_G0013043.1 mouse_genomes_project 5 61528189 61528658 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001743.1 MGP_LPJ_G0001655.1 mouse_genomes_project 5 94675557 94677694 + TEC TEC MGP_LPJ_T0102172.1 MGP_LPJ_G0040209.1 mouse_genomes_project 5 13531519 13532552 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0073792.1 MGP_LPJ_G0029932.1 mouse_genomes_project 5 125524811 125527803 - MGP_LPJ_P0073792 Adam1a protein_coding protein_coding MGP_LPJ_T0072758.1 MGP_LPJ_G0029721.1 mouse_genomes_project 5 107489564 107645099 - MGP_LPJ_P0072758 protein_coding protein_coding MGP_LPJ_T0099625.1 MGP_LPJ_G0037888.1 mouse_genomes_project 5 143555665 143555743 + Gm22956 snRNA snRNA MGP_LPJ_T0001920.1 MGP_LPJ_G0001830.1 mouse_genomes_project 5 147066924 147067885 - TEC TEC MGP_LPJ_T0018116.1 MGP_LPJ_G0015522.1 mouse_genomes_project 5 76943700 76954521 + 4930432L08Rik processed_transcript processed_transcript MGP_LPJ_T0004872.1 MGP_LPJ_G0004192.1 mouse_genomes_project 5 136666055 136669555 + 4930563F08Rik antisense antisense MGP_LPJ_T0001477.1 MGP_LPJ_G0001394.1 mouse_genomes_project 5 9573974 9581973 - TEC TEC MGP_LPJ_T0008209.1 MGP_LPJ_G0006690.1 mouse_genomes_project 5 88031717 88048637 - Gm43057 lincRNA lincRNA MGP_LPJ_T0015155.1 MGP_LPJ_G0013246.1 mouse_genomes_project 5 152165541 152166360 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008492.1 MGP_LPJ_G0006885.1 mouse_genomes_project 5 157203246 157210318 - Gm43597 lincRNA lincRNA MGP_LPJ_T0008493.1 MGP_LPJ_G0006885.1 mouse_genomes_project 5 157203251 157210281 - Gm43597 lincRNA lincRNA MGP_LPJ_T0008494.1 MGP_LPJ_G0006885.1 mouse_genomes_project 5 157205213 157210198 - Gm43597 lincRNA lincRNA MGP_LPJ_T0008392.1 MGP_LPJ_G0006812.1 mouse_genomes_project 5 130946151 130947295 - Gm42592 lincRNA lincRNA MGP_LPJ_T0071345.1 MGP_LPJ_G0029429.1 mouse_genomes_project 5 43279472 43331963 - MGP_LPJ_P0071345 Tapt1 protein_coding protein_coding MGP_LPJ_T0071346.1 MGP_LPJ_G0029429.1 mouse_genomes_project 5 43279477 43331958 - MGP_LPJ_P0071346 Tapt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0071347.1 MGP_LPJ_G0029429.1 mouse_genomes_project 5 43280814 43287135 - Tapt1 protein_coding retained_intron MGP_LPJ_T0071348.1 MGP_LPJ_G0029429.1 mouse_genomes_project 5 43288541 43296421 - Tapt1 protein_coding retained_intron MGP_LPJ_T0071349.1 MGP_LPJ_G0029429.1 mouse_genomes_project 5 43292990 43323554 - MGP_LPJ_P0071349 Tapt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0071350.1 MGP_LPJ_G0029429.1 mouse_genomes_project 5 43293005 43309663 - Tapt1 protein_coding retained_intron MGP_LPJ_T0071351.1 MGP_LPJ_G0029429.1 mouse_genomes_project 5 43296697 43309833 - Tapt1 protein_coding retained_intron MGP_LPJ_T0071352.1 MGP_LPJ_G0029429.1 mouse_genomes_project 5 43323170 43331967 - Tapt1 protein_coding retained_intron MGP_LPJ_T0069898.1 MGP_LPJ_G0029181.1 mouse_genomes_project 5 2816204 2821592 + MGP_LPJ_P0069898 protein_coding protein_coding MGP_LPJ_T0015029.1 MGP_LPJ_G0013120.1 mouse_genomes_project 5 100003932 100004242 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100853.1 MGP_LPJ_G0039116.1 mouse_genomes_project 5 102956210 102956344 + Gm26286 snoRNA snoRNA MGP_LPJ_T0072139.1 MGP_LPJ_G0029562.1 mouse_genomes_project 5 84355921 84446200 - MGP_LPJ_P0072139 Tecrl protein_coding protein_coding MGP_LPJ_T0072140.1 MGP_LPJ_G0029562.1 mouse_genomes_project 5 84368347 84445961 - MGP_LPJ_P0072140 Tecrl protein_coding protein_coding MGP_LPJ_T0098635.1 MGP_LPJ_G0036908.1 mouse_genomes_project 5 135866896 135871585 - Gm43166 sense_intronic sense_intronic MGP_LPJ_T0072463.1 MGP_LPJ_G0029653.1 mouse_genomes_project 5 94001263 94063713 - MGP_LPJ_P0072463 Scarb2 protein_coding protein_coding MGP_LPJ_T0072464.1 MGP_LPJ_G0029653.1 mouse_genomes_project 5 94062876 94064910 - Scarb2 protein_coding retained_intron MGP_LPJ_T0008319.1 MGP_LPJ_G0006764.1 mouse_genomes_project 5 115811882 115814681 + Gm42864 lincRNA lincRNA MGP_LPJ_T0015110.1 MGP_LPJ_G0013201.1 mouse_genomes_project 5 138346053 138347019 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008173.1 MGP_LPJ_G0006662.1 mouse_genomes_project 5 72893405 72894310 - AU023070 lincRNA lincRNA MGP_LPJ_T0001758.1 MGP_LPJ_G0001670.1 mouse_genomes_project 5 102938547 102939623 - TEC TEC MGP_LPJ_T0073743.1 MGP_LPJ_G0029923.1 mouse_genomes_project 5 124895469 124971073 - MGP_LPJ_P0073743 Rph3a protein_coding unknown_likely_coding MGP_LPJ_T0073744.1 MGP_LPJ_G0029923.1 mouse_genomes_project 5 124895472 124972784 - MGP_LPJ_P0073744 Rph3a protein_coding protein_coding MGP_LPJ_T0073745.1 MGP_LPJ_G0029923.1 mouse_genomes_project 5 124895472 124972242 - MGP_LPJ_P0073745 Rph3a protein_coding protein_coding MGP_LPJ_T0073746.1 MGP_LPJ_G0029923.1 mouse_genomes_project 5 124896820 124970560 - MGP_LPJ_P0073746 Rph3a protein_coding protein_coding MGP_LPJ_T0073747.1 MGP_LPJ_G0029923.1 mouse_genomes_project 5 124932050 124972796 - MGP_LPJ_P0073747 Rph3a protein_coding protein_coding MGP_LPJ_T0072204.1 MGP_LPJ_G0029584.1 mouse_genomes_project 5 88797317 88836327 - MGP_LPJ_P0072204 protein_coding protein_coding MGP_LPJ_T0099609.1 MGP_LPJ_G0037872.1 mouse_genomes_project 5 116236421 116236530 + Gm22740 snRNA snRNA MGP_LPJ_T0074373.1 MGP_LPJ_G0030024.1 mouse_genomes_project 5 133303340 133368483 - MGP_LPJ_P0074373 Rimbp2 protein_coding protein_coding MGP_LPJ_T0074374.1 MGP_LPJ_G0030024.1 mouse_genomes_project 5 133303344 133368436 - MGP_LPJ_P0074374 Rimbp2 protein_coding protein_coding MGP_LPJ_T0074375.1 MGP_LPJ_G0030024.1 mouse_genomes_project 5 133305952 133517254 - MGP_LPJ_P0074375 Rimbp2 protein_coding protein_coding MGP_LPJ_T0074376.1 MGP_LPJ_G0030024.1 mouse_genomes_project 5 133305952 133517547 - MGP_LPJ_P0074376 Rimbp2 protein_coding protein_coding MGP_LPJ_T0074377.1 MGP_LPJ_G0030024.1 mouse_genomes_project 5 133306233 133517671 - MGP_LPJ_P0074377 Rimbp2 protein_coding protein_coding MGP_LPJ_T0074378.1 MGP_LPJ_G0030024.1 mouse_genomes_project 5 133353101 133429748 - MGP_LPJ_P0074378 Rimbp2 protein_coding protein_coding MGP_LPJ_T0074379.1 MGP_LPJ_G0030024.1 mouse_genomes_project 5 133388024 133517232 - Rimbp2 protein_coding processed_transcript MGP_LPJ_T0072841.1 MGP_LPJ_G0029739.1 mouse_genomes_project 5 110122201 110137473 + MGP_LPJ_P0072841 protein_coding protein_coding MGP_LPJ_T0072842.1 MGP_LPJ_G0029739.1 mouse_genomes_project 5 110122568 110138822 + MGP_LPJ_P0072842 protein_coding protein_coding MGP_LPJ_T0072843.1 MGP_LPJ_G0029739.1 mouse_genomes_project 5 110122599 110133356 + MGP_LPJ_P0072843 protein_coding protein_coding MGP_LPJ_T0072844.1 MGP_LPJ_G0029739.1 mouse_genomes_project 5 110122602 110136474 + MGP_LPJ_P0072844 protein_coding protein_coding MGP_LPJ_T0072845.1 MGP_LPJ_G0029739.1 mouse_genomes_project 5 110130222 110133488 + protein_coding processed_transcript MGP_LPJ_T0102182.1 MGP_LPJ_G0040219.1 mouse_genomes_project 5 88462918 88469901 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0075052.1 MGP_LPJ_G0030143.1 mouse_genomes_project 5 142892380 142895534 - MGP_LPJ_P0075052 Irs3 protein_coding protein_coding MGP_LPJ_T0075053.1 MGP_LPJ_G0030143.1 mouse_genomes_project 5 142892381 142895711 - MGP_LPJ_P0075053 Irs3 protein_coding protein_coding MGP_LPJ_T0001785.1 MGP_LPJ_G0001697.1 mouse_genomes_project 5 114237723 114238263 + TEC TEC MGP_LPJ_T0001932.1 MGP_LPJ_G0001842.1 mouse_genomes_project 5 154991291 154991937 - TEC TEC MGP_LPJ_T0075304.1 MGP_LPJ_G0030194.1 mouse_genomes_project 5 145434069 145445311 - MGP_LPJ_P0075304 Tmem184a protein_coding protein_coding MGP_LPJ_T0075305.1 MGP_LPJ_G0030194.1 mouse_genomes_project 5 145436536 145449329 - MGP_LPJ_P0075305 Tmem184a protein_coding protein_coding MGP_LPJ_T0075306.1 MGP_LPJ_G0030194.1 mouse_genomes_project 5 145438851 145439565 - Tmem184a protein_coding retained_intron MGP_LPJ_T0075308.1 MGP_LPJ_G0030194.1 mouse_genomes_project 5 145440074 145449088 - MGP_LPJ_P0075308 Tmem184a protein_coding protein_coding MGP_LPJ_T0075309.1 MGP_LPJ_G0030194.1 mouse_genomes_project 5 145445075 145454947 - MGP_LPJ_P0075309 Tmem184a protein_coding protein_coding MGP_LPJ_T0001624.1 MGP_LPJ_G0001538.1 mouse_genomes_project 5 51665383 51668257 + TEC TEC MGP_LPJ_T0070715.1 MGP_LPJ_G0029327.1 mouse_genomes_project 5 29968243 29986991 + MGP_LPJ_P0070715 Gpn1 protein_coding protein_coding MGP_LPJ_T0070716.1 MGP_LPJ_G0029327.1 mouse_genomes_project 5 29968254 29976515 + Gpn1 protein_coding retained_intron MGP_LPJ_T0070717.1 MGP_LPJ_G0029327.1 mouse_genomes_project 5 29968255 29971221 + MGP_LPJ_P0070717 Gpn1 protein_coding protein_coding MGP_LPJ_T0070718.1 MGP_LPJ_G0029327.1 mouse_genomes_project 5 29968269 29972778 + MGP_LPJ_P0070718 Gpn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0070719.1 MGP_LPJ_G0029327.1 mouse_genomes_project 5 29968296 29977022 + Gpn1 protein_coding retained_intron MGP_LPJ_T0070720.1 MGP_LPJ_G0029327.1 mouse_genomes_project 5 29968503 29970829 + Gpn1 protein_coding processed_transcript MGP_LPJ_T0070721.1 MGP_LPJ_G0029327.1 mouse_genomes_project 5 29981152 29984945 + Gpn1 protein_coding retained_intron MGP_LPJ_T0001660.1 MGP_LPJ_G0001573.1 mouse_genomes_project 5 65625501 65627365 - TEC TEC MGP_LPJ_T0073489.1 MGP_LPJ_G0029871.1 mouse_genomes_project 5 118910317 118920879 + MGP_LPJ_P0073489 Pla2g1b protein_coding protein_coding MGP_LPJ_T0073490.1 MGP_LPJ_G0029871.1 mouse_genomes_project 5 118910321 118920867 + Pla2g1b protein_coding processed_transcript MGP_LPJ_T0073491.1 MGP_LPJ_G0029871.1 mouse_genomes_project 5 118910321 118920893 + MGP_LPJ_P0073491 Pla2g1b protein_coding protein_coding MGP_LPJ_T0073492.1 MGP_LPJ_G0029871.1 mouse_genomes_project 5 118910327 118920732 + MGP_LPJ_P0073492 Pla2g1b protein_coding protein_coding MGP_LPJ_T0073493.1 MGP_LPJ_G0029871.1 mouse_genomes_project 5 118910327 118918128 + MGP_LPJ_P0073493 Pla2g1b protein_coding protein_coding MGP_LPJ_T0072066.1 MGP_LPJ_G0029551.1 mouse_genomes_project 5 77602393 77618583 + MGP_LPJ_P0072066 Paics protein_coding protein_coding MGP_LPJ_T0072067.1 MGP_LPJ_G0029551.1 mouse_genomes_project 5 77602434 77618587 + MGP_LPJ_P0072067 Paics protein_coding protein_coding MGP_LPJ_T0072068.1 MGP_LPJ_G0029551.1 mouse_genomes_project 5 77602454 77618391 + MGP_LPJ_P0072068 Paics protein_coding protein_coding MGP_LPJ_T0072069.1 MGP_LPJ_G0029551.1 mouse_genomes_project 5 77602468 77610397 + MGP_LPJ_P0072069 Paics protein_coding protein_coding MGP_LPJ_T0072070.1 MGP_LPJ_G0029551.1 mouse_genomes_project 5 77602863 77613526 + MGP_LPJ_P0072070 Paics protein_coding nonsense_mediated_decay MGP_LPJ_T0072071.1 MGP_LPJ_G0029551.1 mouse_genomes_project 5 77612522 77614017 + Paics protein_coding retained_intron MGP_LPJ_T0072072.1 MGP_LPJ_G0029551.1 mouse_genomes_project 5 77617234 77617919 + Paics protein_coding retained_intron MGP_LPJ_T0071917.1 MGP_LPJ_G0029525.1 mouse_genomes_project 5 73847535 73909328 + MGP_LPJ_P0071917 Cwh43 protein_coding protein_coding MGP_LPJ_T0071918.1 MGP_LPJ_G0029525.1 mouse_genomes_project 5 73847687 73909338 + MGP_LPJ_P0071918 Cwh43 protein_coding protein_coding MGP_LPJ_T0071919.1 MGP_LPJ_G0029525.1 mouse_genomes_project 5 73847822 73909185 + MGP_LPJ_P0071919 Cwh43 protein_coding unknown_likely_coding MGP_LPJ_T0071920.1 MGP_LPJ_G0029525.1 mouse_genomes_project 5 73873940 73878098 + Cwh43 protein_coding retained_intron MGP_LPJ_T0001715.1 MGP_LPJ_G0001627.1 mouse_genomes_project 5 73738623 73739142 - TEC TEC MGP_LPJ_T0074678.1 MGP_LPJ_G0030074.1 mouse_genomes_project 5 139994818 139998789 - MGP_LPJ_P0074678 Wbscr22 protein_coding protein_coding MGP_LPJ_T0074679.1 MGP_LPJ_G0030074.1 mouse_genomes_project 5 139994818 140006528 - MGP_LPJ_P0074679 Wbscr22 protein_coding protein_coding MGP_LPJ_T0074680.1 MGP_LPJ_G0030074.1 mouse_genomes_project 5 139994820 140005940 - MGP_LPJ_P0074680 Wbscr22 protein_coding protein_coding MGP_LPJ_T0074681.1 MGP_LPJ_G0030074.1 mouse_genomes_project 5 139994820 140006821 - MGP_LPJ_P0074681 Wbscr22 protein_coding protein_coding MGP_LPJ_T0074682.1 MGP_LPJ_G0030074.1 mouse_genomes_project 5 139995146 140005901 - MGP_LPJ_P0074682 Wbscr22 protein_coding nonsense_mediated_decay MGP_LPJ_T0074683.1 MGP_LPJ_G0030074.1 mouse_genomes_project 5 139995148 139998589 - Wbscr22 protein_coding retained_intron MGP_LPJ_T0074684.1 MGP_LPJ_G0030074.1 mouse_genomes_project 5 139995194 139998881 - Wbscr22 protein_coding retained_intron MGP_LPJ_T0074685.1 MGP_LPJ_G0030074.1 mouse_genomes_project 5 139995474 139998775 - Wbscr22 protein_coding retained_intron MGP_LPJ_T0074686.1 MGP_LPJ_G0030074.1 mouse_genomes_project 5 139997910 140003331 - Wbscr22 protein_coding processed_transcript MGP_LPJ_T0074687.1 MGP_LPJ_G0030074.1 mouse_genomes_project 5 139998341 140005910 - Wbscr22 protein_coding retained_intron MGP_LPJ_T0074688.1 MGP_LPJ_G0030074.1 mouse_genomes_project 5 139998747 140003203 - Wbscr22 protein_coding retained_intron MGP_LPJ_T0074689.1 MGP_LPJ_G0030074.1 mouse_genomes_project 5 140001056 140005626 - MGP_LPJ_P0074689 Wbscr22 protein_coding protein_coding MGP_LPJ_T0074690.1 MGP_LPJ_G0030074.1 mouse_genomes_project 5 140003122 140005952 - MGP_LPJ_P0074690 Wbscr22 protein_coding protein_coding MGP_LPJ_T0074691.1 MGP_LPJ_G0030074.1 mouse_genomes_project 5 140005598 140005941 - Wbscr22 protein_coding processed_transcript MGP_LPJ_T0074692.1 MGP_LPJ_G0030074.1 mouse_genomes_project 5 140006018 140006511 - MGP_LPJ_P0074692 Wbscr22 protein_coding protein_coding MGP_LPJ_T0070361.1 MGP_LPJ_G0029266.1 mouse_genomes_project 5 26055807 26110593 - MGP_LPJ_P0070361 Paxip1 protein_coding protein_coding MGP_LPJ_T0070362.1 MGP_LPJ_G0029266.1 mouse_genomes_project 5 26059812 26069521 - Paxip1 protein_coding retained_intron MGP_LPJ_T0070363.1 MGP_LPJ_G0029266.1 mouse_genomes_project 5 26078779 26084785 - Paxip1 protein_coding retained_intron MGP_LPJ_T0070364.1 MGP_LPJ_G0029266.1 mouse_genomes_project 5 26091526 26110438 - MGP_LPJ_P0070364 Paxip1 protein_coding nonsense_mediated_decay MGP_LPJ_T0070365.1 MGP_LPJ_G0029266.1 mouse_genomes_project 5 26100492 26110734 - Paxip1 protein_coding processed_transcript MGP_LPJ_T0070366.1 MGP_LPJ_G0029266.1 mouse_genomes_project 5 26102622 26110426 - Paxip1 protein_coding retained_intron MGP_LPJ_T0070367.1 MGP_LPJ_G0029266.1 mouse_genomes_project 5 26105588 26109416 - Paxip1 protein_coding retained_intron MGP_LPJ_T0070444.1 MGP_LPJ_G0029285.1 mouse_genomes_project 5 28585877 28616453 + MGP_LPJ_P0070444 Hadhb protein_coding protein_coding MGP_LPJ_T0070445.1 MGP_LPJ_G0029285.1 mouse_genomes_project 5 28585887 28606607 + MGP_LPJ_P0070445 Hadhb protein_coding protein_coding MGP_LPJ_T0070446.1 MGP_LPJ_G0029285.1 mouse_genomes_project 5 28585901 28616449 + MGP_LPJ_P0070446 Hadhb protein_coding protein_coding MGP_LPJ_T0070447.1 MGP_LPJ_G0029285.1 mouse_genomes_project 5 28585901 28616442 + MGP_LPJ_P0070447 Hadhb protein_coding protein_coding MGP_LPJ_T0070448.1 MGP_LPJ_G0029285.1 mouse_genomes_project 5 28585904 28599733 + Hadhb protein_coding retained_intron MGP_LPJ_T0070449.1 MGP_LPJ_G0029285.1 mouse_genomes_project 5 28585932 28608545 + MGP_LPJ_P0070449 Hadhb protein_coding nonsense_mediated_decay MGP_LPJ_T0070450.1 MGP_LPJ_G0029285.1 mouse_genomes_project 5 28606611 28610745 + Hadhb protein_coding retained_intron MGP_LPJ_T0070451.1 MGP_LPJ_G0029285.1 mouse_genomes_project 5 28610211 28612616 + Hadhb protein_coding retained_intron MGP_LPJ_T0070452.1 MGP_LPJ_G0029285.1 mouse_genomes_project 5 28611872 28615917 + Hadhb protein_coding retained_intron MGP_LPJ_T0010736.1 MGP_LPJ_G0008854.1 mouse_genomes_project 5 128783073 128783153 - Gm27486 miRNA miRNA MGP_LPJ_T0008410.1 MGP_LPJ_G0006825.1 mouse_genomes_project 5 133118941 133126680 - 5930412G12Rik lincRNA lincRNA MGP_LPJ_T0008411.1 MGP_LPJ_G0006825.1 mouse_genomes_project 5 133118941 133141971 - 5930412G12Rik lincRNA lincRNA MGP_LPJ_T0008412.1 MGP_LPJ_G0006825.1 mouse_genomes_project 5 133118963 133141971 - 5930412G12Rik lincRNA lincRNA MGP_LPJ_T0008413.1 MGP_LPJ_G0006825.1 mouse_genomes_project 5 133119013 133126680 - 5930412G12Rik lincRNA lincRNA MGP_LPJ_T0008414.1 MGP_LPJ_G0006825.1 mouse_genomes_project 5 133122955 133141977 - 5930412G12Rik lincRNA lincRNA MGP_LPJ_T0008415.1 MGP_LPJ_G0006825.1 mouse_genomes_project 5 133124066 133141938 - 5930412G12Rik lincRNA lincRNA MGP_LPJ_T0011607.1 MGP_LPJ_G0009725.1 mouse_genomes_project 5 38251975 38252221 + Gm25505 misc_RNA misc_RNA MGP_LPJ_T0015137.1 MGP_LPJ_G0013228.1 mouse_genomes_project 5 148745027 148745612 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099604.1 MGP_LPJ_G0037867.1 mouse_genomes_project 5 108600045 108600152 - Gm25672 snRNA snRNA MGP_LPJ_T0004909.1 MGP_LPJ_G0004219.1 mouse_genomes_project 5 150179104 150183717 - 2900089D17Rik antisense antisense MGP_LPJ_T0004910.1 MGP_LPJ_G0004219.1 mouse_genomes_project 5 150179191 150193395 - 2900089D17Rik antisense antisense MGP_LPJ_T0075376.1 MGP_LPJ_G0030212.1 mouse_genomes_project 5 147010371 148048829 + MGP_LPJ_P0075376 Sdk1 protein_coding protein_coding MGP_LPJ_T0075377.1 MGP_LPJ_G0030212.1 mouse_genomes_project 5 147010799 147372787 + Sdk1 protein_coding retained_intron MGP_LPJ_T0075378.1 MGP_LPJ_G0030212.1 mouse_genomes_project 5 147135876 147774488 + Sdk1 protein_coding retained_intron MGP_LPJ_T0075379.1 MGP_LPJ_G0030212.1 mouse_genomes_project 5 147660332 148046436 + MGP_LPJ_P0075379 Sdk1 protein_coding protein_coding MGP_LPJ_T0008222.1 MGP_LPJ_G0006703.1 mouse_genomes_project 5 98829275 98842642 - Gm33370 lincRNA lincRNA MGP_LPJ_T0014848.1 MGP_LPJ_G0012939.1 mouse_genomes_project 5 20926648 20927256 + processed_pseudogene processed_pseudogene MGP_LPJ_T0072271.1 MGP_LPJ_G0029604.1 mouse_genomes_project 5 89648684 89666217 + MGP_LPJ_P0072271 Gm7714 protein_coding protein_coding MGP_LPJ_T0071120.1 MGP_LPJ_G0029389.1 mouse_genomes_project 5 35256369 35269154 - MGP_LPJ_P0071120 Tada2b protein_coding protein_coding MGP_LPJ_T0071121.1 MGP_LPJ_G0029389.1 mouse_genomes_project 5 35260789 35269160 - MGP_LPJ_P0071121 Tada2b protein_coding protein_coding MGP_LPJ_T0075215.1 MGP_LPJ_G0030178.1 mouse_genomes_project 5 144577459 144701816 - MGP_LPJ_P0075215 Prkar1b protein_coding protein_coding MGP_LPJ_T0075216.1 MGP_LPJ_G0030178.1 mouse_genomes_project 5 144578816 144583961 - Prkar1b protein_coding processed_transcript MGP_LPJ_T0075217.1 MGP_LPJ_G0030178.1 mouse_genomes_project 5 144605964 144699864 - MGP_LPJ_P0075217 Prkar1b protein_coding protein_coding MGP_LPJ_T0075218.1 MGP_LPJ_G0030178.1 mouse_genomes_project 5 144614175 144702220 - MGP_LPJ_P0075218 Prkar1b protein_coding protein_coding MGP_LPJ_T0075219.1 MGP_LPJ_G0030178.1 mouse_genomes_project 5 144627425 144683345 - MGP_LPJ_P0075219 Prkar1b protein_coding protein_coding MGP_LPJ_T0075220.1 MGP_LPJ_G0030178.1 mouse_genomes_project 5 144679341 144702637 - MGP_LPJ_P0075220 Prkar1b protein_coding protein_coding MGP_LPJ_T0075221.1 MGP_LPJ_G0030178.1 mouse_genomes_project 5 144679368 144722459 - MGP_LPJ_P0075221 Prkar1b protein_coding protein_coding MGP_LPJ_T0075222.1 MGP_LPJ_G0030178.1 mouse_genomes_project 5 144679434 144702444 - MGP_LPJ_P0075222 Prkar1b protein_coding protein_coding MGP_LPJ_T0075223.1 MGP_LPJ_G0030178.1 mouse_genomes_project 5 144720511 144722415 - Prkar1b protein_coding processed_transcript MGP_LPJ_T0014829.1 MGP_LPJ_G0012920.1 mouse_genomes_project 5 18511014 18511320 + processed_pseudogene processed_pseudogene MGP_LPJ_T0070456.1 MGP_LPJ_G0029287.1 mouse_genomes_project 5 28659009 28698811 + MGP_LPJ_P0070456 protein_coding protein_coding MGP_LPJ_T0070457.1 MGP_LPJ_G0029287.1 mouse_genomes_project 5 28659063 28661103 + protein_coding retained_intron MGP_LPJ_T0070458.1 MGP_LPJ_G0029287.1 mouse_genomes_project 5 28659068 28677499 + protein_coding retained_intron MGP_LPJ_T0070459.1 MGP_LPJ_G0029287.1 mouse_genomes_project 5 28659075 28684928 + protein_coding retained_intron MGP_LPJ_T0070460.1 MGP_LPJ_G0029287.1 mouse_genomes_project 5 28659078 28684167 + MGP_LPJ_P0070460 protein_coding nonsense_mediated_decay MGP_LPJ_T0070461.1 MGP_LPJ_G0029287.1 mouse_genomes_project 5 28659102 28695357 + MGP_LPJ_P0070461 protein_coding nonsense_mediated_decay MGP_LPJ_T0070462.1 MGP_LPJ_G0029287.1 mouse_genomes_project 5 28689454 28693378 + protein_coding retained_intron MGP_LPJ_T0070463.1 MGP_LPJ_G0029287.1 mouse_genomes_project 5 28689934 28693632 + protein_coding processed_transcript MGP_LPJ_T0015121.1 MGP_LPJ_G0013212.1 mouse_genomes_project 5 142847695 142849067 + processed_pseudogene processed_pseudogene MGP_LPJ_T0071012.1 MGP_LPJ_G0029370.1 mouse_genomes_project 5 33326804 33423966 + MGP_LPJ_P0071012 Grk4 protein_coding protein_coding MGP_LPJ_T0071013.1 MGP_LPJ_G0029370.1 mouse_genomes_project 5 33327400 33343809 + MGP_LPJ_P0071013 Grk4 protein_coding protein_coding MGP_LPJ_T0071014.1 MGP_LPJ_G0029370.1 mouse_genomes_project 5 33377565 33412456 + Grk4 protein_coding processed_transcript MGP_LPJ_T0071015.1 MGP_LPJ_G0029370.1 mouse_genomes_project 5 33411561 33423968 + Grk4 protein_coding processed_transcript MGP_LPJ_T0001714.1 MGP_LPJ_G0001626.1 mouse_genomes_project 5 73703475 73704353 + TEC TEC MGP_LPJ_T0072847.1 MGP_LPJ_G0029741.1 mouse_genomes_project 5 110162210 110175996 + MGP_LPJ_P0072847 1700028K03Rik protein_coding protein_coding MGP_LPJ_T0072848.1 MGP_LPJ_G0029741.1 mouse_genomes_project 5 110162221 110178911 + 1700028K03Rik protein_coding processed_transcript MGP_LPJ_T0072849.1 MGP_LPJ_G0029741.1 mouse_genomes_project 5 110162238 110176838 + MGP_LPJ_P0072849 1700028K03Rik protein_coding protein_coding MGP_LPJ_T0072850.1 MGP_LPJ_G0029741.1 mouse_genomes_project 5 110162258 110176646 + 1700028K03Rik protein_coding retained_intron MGP_LPJ_T0014820.1 MGP_LPJ_G0012911.1 mouse_genomes_project 5 14119987 14120771 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010714.1 MGP_LPJ_G0008832.1 mouse_genomes_project 5 88946766 88946858 - Mir3969 miRNA miRNA MGP_LPJ_T0001508.1 MGP_LPJ_G0001424.1 mouse_genomes_project 5 23552622 23556642 + TEC TEC MGP_LPJ_T0071981.1 MGP_LPJ_G0029537.1 mouse_genomes_project 5 75690218 75691145 - MGP_LPJ_P0071981 Olfr1151 protein_coding protein_coding MGP_LPJ_T0101556.1 MGP_LPJ_G0039660.1 mouse_genomes_project 5 73428071 73432199 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0001897.1 MGP_LPJ_G0001808.1 mouse_genomes_project 5 137301207 137303367 - TEC TEC MGP_LPJ_T0008062.1 MGP_LPJ_G0006584.1 mouse_genomes_project 5 14641178 14644446 + lincRNA lincRNA MGP_LPJ_T0008364.1 MGP_LPJ_G0006798.1 mouse_genomes_project 5 124493753 124494463 + Gm15749 lincRNA lincRNA MGP_LPJ_T0004673.1 MGP_LPJ_G0004048.1 mouse_genomes_project 5 23070408 23074285 + Prkag2os1 antisense antisense MGP_LPJ_T0098264.1 MGP_LPJ_G0036545.1 mouse_genomes_project 5 414871 414991 + n-R5s169 rRNA rRNA MGP_LPJ_T0101363.1 MGP_LPJ_G0039564.1 mouse_genomes_project 5 78214055 78214442 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0101364.1 MGP_LPJ_G0039564.1 mouse_genomes_project 5 78214071 78214626 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0070852.1 MGP_LPJ_G0029349.1 mouse_genomes_project 5 32243063 32264957 - MGP_LPJ_P0070852 Slbp protein_coding protein_coding MGP_LPJ_T0070853.1 MGP_LPJ_G0029349.1 mouse_genomes_project 5 32250478 32252151 - Slbp protein_coding retained_intron MGP_LPJ_T0070854.1 MGP_LPJ_G0029349.1 mouse_genomes_project 5 32250800 32264865 - MGP_LPJ_P0070854 Slbp protein_coding unknown_likely_coding MGP_LPJ_T0070855.1 MGP_LPJ_G0029349.1 mouse_genomes_project 5 32251929 32264950 - Slbp protein_coding retained_intron MGP_LPJ_T0070856.1 MGP_LPJ_G0029349.1 mouse_genomes_project 5 32253210 32264912 - MGP_LPJ_P0070856 Slbp protein_coding protein_coding MGP_LPJ_T0070857.1 MGP_LPJ_G0029349.1 mouse_genomes_project 5 32255317 32264908 - MGP_LPJ_P0070857 Slbp protein_coding protein_coding MGP_LPJ_T0070858.1 MGP_LPJ_G0029349.1 mouse_genomes_project 5 32258602 32264965 - Slbp protein_coding retained_intron MGP_LPJ_T0070859.1 MGP_LPJ_G0029349.1 mouse_genomes_project 5 32264236 32264913 - Slbp protein_coding retained_intron MGP_LPJ_T0008402.1 MGP_LPJ_G0006819.1 mouse_genomes_project 5 131624071 131638980 + 4930572K03Rik lincRNA lincRNA MGP_LPJ_T0008403.1 MGP_LPJ_G0006819.1 mouse_genomes_project 5 131624076 131638994 + 4930572K03Rik lincRNA lincRNA MGP_LPJ_T0004920.1 MGP_LPJ_G0004227.1 mouse_genomes_project 5 156642724 156660848 - Gm42557 antisense antisense MGP_LPJ_T0071188.1 MGP_LPJ_G0029400.1 mouse_genomes_project 5 36115630 36154580 - MGP_LPJ_P0071188 Evc protein_coding protein_coding MGP_LPJ_T0071189.1 MGP_LPJ_G0029400.1 mouse_genomes_project 5 36116181 36124790 - MGP_LPJ_P0071189 Evc protein_coding protein_coding MGP_LPJ_T0071190.1 MGP_LPJ_G0029400.1 mouse_genomes_project 5 36116836 36151290 - MGP_LPJ_P0071190 Evc protein_coding protein_coding MGP_LPJ_T0071191.1 MGP_LPJ_G0029400.1 mouse_genomes_project 5 36116898 36129965 - Evc protein_coding retained_intron MGP_LPJ_T0071192.1 MGP_LPJ_G0029400.1 mouse_genomes_project 5 36116943 36118073 - MGP_LPJ_P0071192 Evc protein_coding protein_coding MGP_LPJ_T0071193.1 MGP_LPJ_G0029400.1 mouse_genomes_project 5 36130869 36154552 - MGP_LPJ_P0071193 Evc protein_coding protein_coding MGP_LPJ_T0071194.1 MGP_LPJ_G0029400.1 mouse_genomes_project 5 36132165 36135973 - Evc protein_coding retained_intron MGP_LPJ_T0071195.1 MGP_LPJ_G0029400.1 mouse_genomes_project 5 36133816 36136092 - Evc protein_coding retained_intron MGP_LPJ_T0071196.1 MGP_LPJ_G0029400.1 mouse_genomes_project 5 36136791 36154564 - Evc protein_coding retained_intron MGP_LPJ_T0070662.1 MGP_LPJ_G0029319.1 mouse_genomes_project 5 29686824 29687382 - MGP_LPJ_P0070662 Gm9970 protein_coding protein_coding MGP_LPJ_T0008080.1 MGP_LPJ_G0006595.1 mouse_genomes_project 5 23725643 23727095 + 1700096K18Rik lincRNA lincRNA MGP_LPJ_T0099612.1 MGP_LPJ_G0037875.1 mouse_genomes_project 5 118937661 118937802 + Gm24407 snRNA snRNA MGP_LPJ_T0001684.1 MGP_LPJ_G0001597.1 mouse_genomes_project 5 66825911 66828874 - TEC TEC MGP_LPJ_T0008361.1 MGP_LPJ_G0006796.1 mouse_genomes_project 5 123741734 123745885 + Gm43277 lincRNA lincRNA MGP_LPJ_T0015131.1 MGP_LPJ_G0013222.1 mouse_genomes_project 5 145329591 145329967 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001749.1 MGP_LPJ_G0001661.1 mouse_genomes_project 5 98831575 98832121 - TEC TEC MGP_LPJ_T0001767.1 MGP_LPJ_G0001679.1 mouse_genomes_project 5 106277568 106280345 - TEC TEC MGP_LPJ_T0008071.1 MGP_LPJ_G0006589.1 mouse_genomes_project 5 21416004 21417533 + 4930580E04Rik lincRNA lincRNA MGP_LPJ_T0072273.1 MGP_LPJ_G0029606.1 mouse_genomes_project 5 89776635 89786352 + MGP_LPJ_P0072273 Amtn protein_coding protein_coding MGP_LPJ_T0010751.1 MGP_LPJ_G0008869.1 mouse_genomes_project 5 143495960 143496048 - Mir93 miRNA miRNA MGP_LPJ_T0074972.1 MGP_LPJ_G0030129.1 mouse_genomes_project 5 142554667 142580917 + MGP_LPJ_P0074972 Ephb4 protein_coding protein_coding MGP_LPJ_T0074973.1 MGP_LPJ_G0030129.1 mouse_genomes_project 5 142554699 142585118 + MGP_LPJ_P0074973 Ephb4 protein_coding nonsense_mediated_decay MGP_LPJ_T0074974.1 MGP_LPJ_G0030129.1 mouse_genomes_project 5 142554730 142580909 + MGP_LPJ_P0074974 Ephb4 protein_coding protein_coding MGP_LPJ_T0074975.1 MGP_LPJ_G0030129.1 mouse_genomes_project 5 142554988 142580613 + MGP_LPJ_P0074975 Ephb4 protein_coding protein_coding MGP_LPJ_T0074976.1 MGP_LPJ_G0030129.1 mouse_genomes_project 5 142555071 142580921 + MGP_LPJ_P0074976 Ephb4 protein_coding protein_coding MGP_LPJ_T0001484.1 MGP_LPJ_G0001401.1 mouse_genomes_project 5 11185411 11187267 - TEC TEC MGP_LPJ_T0004806.1 MGP_LPJ_G0004146.1 mouse_genomes_project 5 117096745 117097261 + Gm17122 antisense antisense MGP_LPJ_T0001762.1 MGP_LPJ_G0001674.1 mouse_genomes_project 5 104130808 104132153 + TEC TEC MGP_LPJ_T0075373.1 MGP_LPJ_G0030211.1 mouse_genomes_project 5 146599902 146739110 - MGP_LPJ_P0075373 Card11 protein_coding protein_coding MGP_LPJ_T0075374.1 MGP_LPJ_G0030211.1 mouse_genomes_project 5 146599904 146609128 - Card11 protein_coding retained_intron MGP_LPJ_T0075375.1 MGP_LPJ_G0030211.1 mouse_genomes_project 5 146643260 146738999 - Card11 protein_coding retained_intron MGP_LPJ_T0015043.1 MGP_LPJ_G0013134.1 mouse_genomes_project 5 105466178 105466766 + processed_pseudogene processed_pseudogene MGP_LPJ_T0070141.1 MGP_LPJ_G0029225.1 mouse_genomes_project 5 19878397 20337809 - MGP_LPJ_P0070141 Reln protein_coding protein_coding MGP_LPJ_T0070142.1 MGP_LPJ_G0029225.1 mouse_genomes_project 5 19878839 19892405 - Reln protein_coding processed_transcript MGP_LPJ_T0070143.1 MGP_LPJ_G0029225.1 mouse_genomes_project 5 19879194 20337797 - MGP_LPJ_P0070143 Reln protein_coding protein_coding MGP_LPJ_T0070144.1 MGP_LPJ_G0029225.1 mouse_genomes_project 5 19885844 19889195 - Reln protein_coding retained_intron MGP_LPJ_T0070145.1 MGP_LPJ_G0029225.1 mouse_genomes_project 5 19890203 19895382 - Reln protein_coding processed_transcript MGP_LPJ_T0070146.1 MGP_LPJ_G0029225.1 mouse_genomes_project 5 19891969 19892325 - Reln protein_coding retained_intron MGP_LPJ_T0070147.1 MGP_LPJ_G0029225.1 mouse_genomes_project 5 19895059 19934098 - Reln protein_coding retained_intron MGP_LPJ_T0070148.1 MGP_LPJ_G0029225.1 mouse_genomes_project 5 19977663 20011293 - Reln protein_coding retained_intron MGP_LPJ_T0070149.1 MGP_LPJ_G0029225.1 mouse_genomes_project 5 20004067 20337797 - Reln protein_coding retained_intron MGP_LPJ_T0070150.1 MGP_LPJ_G0029225.1 mouse_genomes_project 5 20050712 20051942 - Reln protein_coding retained_intron MGP_LPJ_T0070151.1 MGP_LPJ_G0029225.1 mouse_genomes_project 5 20063500 20126905 - MGP_LPJ_P0070151 Reln protein_coding nonsense_mediated_decay MGP_LPJ_T0070152.1 MGP_LPJ_G0029225.1 mouse_genomes_project 5 20120354 20337797 - Reln protein_coding retained_intron MGP_LPJ_T0070153.1 MGP_LPJ_G0029225.1 mouse_genomes_project 5 20167771 20337797 - Reln protein_coding retained_intron MGP_LPJ_T0070154.1 MGP_LPJ_G0029225.1 mouse_genomes_project 5 20211564 20337797 - Reln protein_coding retained_intron MGP_LPJ_T0070155.1 MGP_LPJ_G0029225.1 mouse_genomes_project 5 20335176 20337809 - Reln protein_coding processed_transcript MGP_LPJ_T0001875.1 MGP_LPJ_G0001786.1 mouse_genomes_project 5 135672387 135676057 - TEC TEC MGP_LPJ_T0074459.1 MGP_LPJ_G0030040.1 mouse_genomes_project 5 134607884 134621908 - MGP_LPJ_P0074459 Gusb protein_coding protein_coding MGP_LPJ_T0074460.1 MGP_LPJ_G0030040.1 mouse_genomes_project 5 134607896 134621687 - MGP_LPJ_P0074460 Gusb protein_coding nonsense_mediated_decay MGP_LPJ_T0074461.1 MGP_LPJ_G0030040.1 mouse_genomes_project 5 134608454 134609516 - Gusb protein_coding retained_intron MGP_LPJ_T0074462.1 MGP_LPJ_G0030040.1 mouse_genomes_project 5 134617508 134621724 - MGP_LPJ_P0074462 Gusb protein_coding protein_coding MGP_LPJ_T0074463.1 MGP_LPJ_G0030040.1 mouse_genomes_project 5 134618448 134621740 - MGP_LPJ_P0074463 Gusb protein_coding protein_coding MGP_LPJ_T0074464.1 MGP_LPJ_G0030040.1 mouse_genomes_project 5 134618471 134621824 - Gusb protein_coding retained_intron MGP_LPJ_T0015056.1 MGP_LPJ_G0013147.1 mouse_genomes_project 5 109287095 109287743 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015084.1 MGP_LPJ_G0013175.1 mouse_genomes_project 5 117389359 117390424 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099560.1 MGP_LPJ_G0037823.1 mouse_genomes_project 5 23706478 23706649 + Gm22656 snRNA snRNA MGP_LPJ_T0008216.1 MGP_LPJ_G0006697.1 mouse_genomes_project 5 93267485 93268516 - 1700063O14Rik lincRNA lincRNA MGP_LPJ_T0071213.1 MGP_LPJ_G0029406.1 mouse_genomes_project 5 36991518 37014542 - MGP_LPJ_P0071213 Nsg1 protein_coding protein_coding MGP_LPJ_T0071214.1 MGP_LPJ_G0029406.1 mouse_genomes_project 5 36992461 36993156 - MGP_LPJ_P0071214 Nsg1 protein_coding protein_coding MGP_LPJ_T0071215.1 MGP_LPJ_G0029406.1 mouse_genomes_project 5 36992582 37013666 - MGP_LPJ_P0071215 Nsg1 protein_coding protein_coding MGP_LPJ_T0071216.1 MGP_LPJ_G0029406.1 mouse_genomes_project 5 36992869 37014040 - MGP_LPJ_P0071216 Nsg1 protein_coding protein_coding MGP_LPJ_T0071217.1 MGP_LPJ_G0029406.1 mouse_genomes_project 5 36999035 37014040 - MGP_LPJ_P0071217 Nsg1 protein_coding protein_coding MGP_LPJ_T0071218.1 MGP_LPJ_G0029406.1 mouse_genomes_project 5 36999040 37013997 - MGP_LPJ_P0071218 Nsg1 protein_coding protein_coding MGP_LPJ_T0071219.1 MGP_LPJ_G0029406.1 mouse_genomes_project 5 37009967 37014108 - Nsg1 protein_coding retained_intron MGP_LPJ_T0073655.1 MGP_LPJ_G0029899.1 mouse_genomes_project 5 123442140 123445135 + Tbx3 protein_coding retained_intron MGP_LPJ_T0073656.1 MGP_LPJ_G0029899.1 mouse_genomes_project 5 123442140 123456020 + MGP_LPJ_P0073656 Tbx3 protein_coding protein_coding MGP_LPJ_T0073657.1 MGP_LPJ_G0029899.1 mouse_genomes_project 5 123442333 123456182 + MGP_LPJ_P0073657 Tbx3 protein_coding protein_coding MGP_LPJ_T0073658.1 MGP_LPJ_G0029899.1 mouse_genomes_project 5 123442489 123456182 + MGP_LPJ_P0073658 Tbx3 protein_coding protein_coding MGP_LPJ_T0073659.1 MGP_LPJ_G0029899.1 mouse_genomes_project 5 123446913 123452101 + Tbx3 protein_coding retained_intron MGP_LPJ_T0073660.1 MGP_LPJ_G0029899.1 mouse_genomes_project 5 123451719 123452303 + Tbx3 protein_coding processed_transcript MGP_LPJ_T0004674.1 MGP_LPJ_G0004049.1 mouse_genomes_project 5 25861776 25863098 - Gm16058 antisense antisense MGP_LPJ_T0070352.1 MGP_LPJ_G0029265.1 mouse_genomes_project 5 25094265 25130502 + Dpp6 protein_coding processed_transcript MGP_LPJ_T0070353.1 MGP_LPJ_G0029265.1 mouse_genomes_project 5 25094419 26042205 + MGP_LPJ_P0070353 Dpp6 protein_coding protein_coding MGP_LPJ_T0070354.1 MGP_LPJ_G0029265.1 mouse_genomes_project 5 25094496 25753821 + Dpp6 protein_coding retained_intron MGP_LPJ_T0070355.1 MGP_LPJ_G0029265.1 mouse_genomes_project 5 25188135 26043262 + MGP_LPJ_P0070355 Dpp6 protein_coding protein_coding MGP_LPJ_T0070356.1 MGP_LPJ_G0029265.1 mouse_genomes_project 5 25336052 26043258 + MGP_LPJ_P0070356 Dpp6 protein_coding protein_coding MGP_LPJ_T0070357.1 MGP_LPJ_G0029265.1 mouse_genomes_project 5 25336243 25338949 + Dpp6 protein_coding retained_intron MGP_LPJ_T0070358.1 MGP_LPJ_G0029265.1 mouse_genomes_project 5 25557765 26043257 + MGP_LPJ_P0070358 Dpp6 protein_coding protein_coding MGP_LPJ_T0070359.1 MGP_LPJ_G0029265.1 mouse_genomes_project 5 25557765 25693397 + MGP_LPJ_P0070359 Dpp6 protein_coding nonsense_mediated_decay MGP_LPJ_T0070360.1 MGP_LPJ_G0029265.1 mouse_genomes_project 5 25843091 26011106 + Dpp6 protein_coding retained_intron MGP_LPJ_T0075313.1 MGP_LPJ_G0030197.1 mouse_genomes_project 5 145553998 145626573 + MGP_LPJ_P0075313 Elfn1 protein_coding protein_coding MGP_LPJ_T0075314.1 MGP_LPJ_G0030197.1 mouse_genomes_project 5 145554529 145622899 + Elfn1 protein_coding processed_transcript MGP_LPJ_T0015154.1 MGP_LPJ_G0013245.1 mouse_genomes_project 5 152120384 152120544 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008215.1 MGP_LPJ_G0006696.1 mouse_genomes_project 5 93264572 93269130 - Gm28271 lincRNA lincRNA MGP_LPJ_T0014821.1 MGP_LPJ_G0012912.1 mouse_genomes_project 5 14297697 14298714 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015090.1 MGP_LPJ_G0013181.1 mouse_genomes_project 5 118687642 118687944 + processed_pseudogene processed_pseudogene MGP_LPJ_T0072357.1 MGP_LPJ_G0029628.1 mouse_genomes_project 5 92238055 92239601 + MGP_LPJ_P0072357 Ppbp protein_coding protein_coding MGP_LPJ_T0074516.1 MGP_LPJ_G0030052.1 mouse_genomes_project 5 135578051 136062545 - MGP_LPJ_P0074516 Wbscr17 protein_coding protein_coding MGP_LPJ_T0074517.1 MGP_LPJ_G0030052.1 mouse_genomes_project 5 135681325 136062124 - MGP_LPJ_P0074517 Wbscr17 protein_coding protein_coding MGP_LPJ_T0074518.1 MGP_LPJ_G0030052.1 mouse_genomes_project 5 135805540 136060963 - Wbscr17 protein_coding retained_intron MGP_LPJ_T0074519.1 MGP_LPJ_G0030052.1 mouse_genomes_project 5 135887642 136061921 - Wbscr17 protein_coding retained_intron MGP_LPJ_T0074520.1 MGP_LPJ_G0030052.1 mouse_genomes_project 5 136060897 136062126 - Wbscr17 protein_coding processed_transcript MGP_LPJ_T0099585.1 MGP_LPJ_G0037848.1 mouse_genomes_project 5 75936729 75936834 - Gm22084 snRNA snRNA MGP_LPJ_T0001719.1 MGP_LPJ_G0001631.1 mouse_genomes_project 5 74547004 74547754 + TEC TEC MGP_LPJ_T0001905.1 MGP_LPJ_G0001815.1 mouse_genomes_project 5 139366330 139370534 - TEC TEC MGP_LPJ_T0073315.1 MGP_LPJ_G0029836.1 mouse_genomes_project 5 117544508 117565235 - MGP_LPJ_P0073315 Foxn4 protein_coding protein_coding MGP_LPJ_T0073316.1 MGP_LPJ_G0029836.1 mouse_genomes_project 5 117545929 117554557 - MGP_LPJ_P0073316 Foxn4 protein_coding nonsense_mediated_decay MGP_LPJ_T0073317.1 MGP_LPJ_G0029836.1 mouse_genomes_project 5 117550705 117565130 - MGP_LPJ_P0073317 Foxn4 protein_coding protein_coding MGP_LPJ_T0073318.1 MGP_LPJ_G0029836.1 mouse_genomes_project 5 117554142 117565177 - Foxn4 protein_coding retained_intron MGP_LPJ_T0001805.1 MGP_LPJ_G0001717.1 mouse_genomes_project 5 119353099 119355379 + TEC TEC MGP_LPJ_T0075016.1 MGP_LPJ_G0030137.1 mouse_genomes_project 5 142841891 142846811 - MGP_LPJ_P0075016 Mospd3 protein_coding protein_coding MGP_LPJ_T0075017.1 MGP_LPJ_G0030137.1 mouse_genomes_project 5 142841891 142847147 - MGP_LPJ_P0075017 Mospd3 protein_coding protein_coding MGP_LPJ_T0075018.1 MGP_LPJ_G0030137.1 mouse_genomes_project 5 142842401 142846903 - Mospd3 protein_coding processed_transcript MGP_LPJ_T0075019.1 MGP_LPJ_G0030137.1 mouse_genomes_project 5 142842453 142847161 - MGP_LPJ_P0075019 Mospd3 protein_coding protein_coding MGP_LPJ_T0075020.1 MGP_LPJ_G0030137.1 mouse_genomes_project 5 142846136 142846827 - MGP_LPJ_P0075020 Mospd3 protein_coding protein_coding MGP_LPJ_T0075021.1 MGP_LPJ_G0030137.1 mouse_genomes_project 5 142846185 142846794 - Mospd3 protein_coding retained_intron MGP_LPJ_T0073430.1 MGP_LPJ_G0029857.1 mouse_genomes_project 5 118498234 118498840 - MGP_LPJ_P0073430 Gm10401 protein_coding protein_coding MGP_LPJ_T0072203.1 MGP_LPJ_G0029583.1 mouse_genomes_project 5 88759045 88771100 - MGP_LPJ_P0072203 protein_coding protein_coding MGP_LPJ_T0072225.1 MGP_LPJ_G0029591.1 mouse_genomes_project 5 89055515 89062514 - MGP_LPJ_P0072225 Csn2 protein_coding protein_coding MGP_LPJ_T0072226.1 MGP_LPJ_G0029591.1 mouse_genomes_project 5 89055516 89062293 - Csn2 protein_coding retained_intron MGP_LPJ_T0072227.1 MGP_LPJ_G0029591.1 mouse_genomes_project 5 89055519 89059540 - Csn2 protein_coding retained_intron MGP_LPJ_T0072228.1 MGP_LPJ_G0029591.1 mouse_genomes_project 5 89055519 89062309 - MGP_LPJ_P0072228 Csn2 protein_coding protein_coding MGP_LPJ_T0072229.1 MGP_LPJ_G0029591.1 mouse_genomes_project 5 89055696 89062293 - MGP_LPJ_P0072229 Csn2 protein_coding protein_coding MGP_LPJ_T0072230.1 MGP_LPJ_G0029591.1 mouse_genomes_project 5 89055760 89062305 - MGP_LPJ_P0072230 Csn2 protein_coding protein_coding MGP_LPJ_T0072231.1 MGP_LPJ_G0029591.1 mouse_genomes_project 5 89055820 89062305 - MGP_LPJ_P0072231 Csn2 protein_coding protein_coding MGP_LPJ_T0072232.1 MGP_LPJ_G0029591.1 mouse_genomes_project 5 89056727 89060976 - MGP_LPJ_P0072232 Csn2 protein_coding protein_coding MGP_LPJ_T0072233.1 MGP_LPJ_G0029591.1 mouse_genomes_project 5 89057447 89059415 - Csn2 protein_coding processed_transcript MGP_LPJ_T0072234.1 MGP_LPJ_G0029591.1 mouse_genomes_project 5 89060692 89062305 - Csn2 protein_coding retained_intron MGP_LPJ_T0072235.1 MGP_LPJ_G0029591.1 mouse_genomes_project 5 89060776 89062305 - Csn2 protein_coding retained_intron MGP_LPJ_T0004730.1 MGP_LPJ_G0004093.1 mouse_genomes_project 5 67251203 67253521 - Gm15948 antisense antisense MGP_LPJ_T0008442.1 MGP_LPJ_G0006847.1 mouse_genomes_project 5 149147325 149155872 + 4930448H16Rik lincRNA lincRNA MGP_LPJ_T0074619.1 MGP_LPJ_G0030061.1 mouse_genomes_project 5 139446984 139449010 - MGP_LPJ_P0074619 Syna protein_coding protein_coding MGP_LPJ_T0072717.1 MGP_LPJ_G0029705.1 mouse_genomes_project 5 106088381 106112729 - MGP_LPJ_P0072717 Klhl8 protein_coding protein_coding MGP_LPJ_T0072718.1 MGP_LPJ_G0029705.1 mouse_genomes_project 5 106088381 106112729 - MGP_LPJ_P0072718 Klhl8 protein_coding protein_coding MGP_LPJ_T0072719.1 MGP_LPJ_G0029705.1 mouse_genomes_project 5 106088458 106137515 - MGP_LPJ_P0072719 Klhl8 protein_coding protein_coding MGP_LPJ_T0072720.1 MGP_LPJ_G0029705.1 mouse_genomes_project 5 106088488 106112729 - MGP_LPJ_P0072720 Klhl8 protein_coding nonsense_mediated_decay MGP_LPJ_T0072721.1 MGP_LPJ_G0029705.1 mouse_genomes_project 5 106096718 106100777 - Klhl8 protein_coding retained_intron MGP_LPJ_T0001925.1 MGP_LPJ_G0001835.1 mouse_genomes_project 5 149328719 149330936 - TEC pseudogene MGP_LPJ_T0073055.1 MGP_LPJ_G0029786.1 mouse_genomes_project 5 113292640 113350275 + MGP_LPJ_P0073055 Pole protein_coding protein_coding MGP_LPJ_T0073056.1 MGP_LPJ_G0029786.1 mouse_genomes_project 5 113292675 113297538 + MGP_LPJ_P0073056 Pole protein_coding protein_coding MGP_LPJ_T0073057.1 MGP_LPJ_G0029786.1 mouse_genomes_project 5 113292711 113315899 + Pole protein_coding retained_intron MGP_LPJ_T0073058.1 MGP_LPJ_G0029786.1 mouse_genomes_project 5 113292722 113350259 + MGP_LPJ_P0073058 Pole protein_coding unknown_likely_coding MGP_LPJ_T0073059.1 MGP_LPJ_G0029786.1 mouse_genomes_project 5 113324775 113326913 + Pole protein_coding retained_intron MGP_LPJ_T0073060.1 MGP_LPJ_G0029786.1 mouse_genomes_project 5 113339052 113350252 + Pole protein_coding retained_intron MGP_LPJ_T0073061.1 MGP_LPJ_G0029786.1 mouse_genomes_project 5 113343593 113350254 + MGP_LPJ_P0073061 Pole protein_coding protein_coding MGP_LPJ_T0073062.1 MGP_LPJ_G0029786.1 mouse_genomes_project 5 113346266 113350237 + Pole protein_coding retained_intron MGP_LPJ_T0070283.1 MGP_LPJ_G0029248.1 mouse_genomes_project 5 22682860 22694896 - MGP_LPJ_P0070283 4931409K22Rik protein_coding protein_coding MGP_LPJ_T0070284.1 MGP_LPJ_G0029248.1 mouse_genomes_project 5 22682860 22694896 - MGP_LPJ_P0070284 4931409K22Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0070285.1 MGP_LPJ_G0029248.1 mouse_genomes_project 5 22682876 22692120 - 4931409K22Rik protein_coding retained_intron MGP_LPJ_T0070286.1 MGP_LPJ_G0029248.1 mouse_genomes_project 5 22692121 22694955 - MGP_LPJ_P0070286 4931409K22Rik protein_coding protein_coding MGP_LPJ_T0070287.1 MGP_LPJ_G0029248.1 mouse_genomes_project 5 22692130 22696299 - 4931409K22Rik protein_coding processed_transcript MGP_LPJ_T0098636.1 MGP_LPJ_G0036909.1 mouse_genomes_project 5 139155513 139155929 - Gm43480 sense_intronic sense_intronic MGP_LPJ_T0014931.1 MGP_LPJ_G0013022.1 mouse_genomes_project 5 54580963 54581792 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001710.1 MGP_LPJ_G0001623.1 mouse_genomes_project 5 73324734 73327090 - TEC TEC MGP_LPJ_T0001711.1 MGP_LPJ_G0001623.1 mouse_genomes_project 5 73326443 73327090 - TEC pseudogene MGP_LPJ_T0015052.1 MGP_LPJ_G0013143.1 mouse_genomes_project 5 108502314 108502924 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014984.1 MGP_LPJ_G0013075.1 mouse_genomes_project 5 75690921 75691144 - processed_pseudogene processed_pseudogene MGP_LPJ_T0074168.1 MGP_LPJ_G0029988.1 mouse_genomes_project 5 128322269 128351281 - MGP_LPJ_P0074168 Vps37b protein_coding protein_coding MGP_LPJ_T0074169.1 MGP_LPJ_G0029988.1 mouse_genomes_project 5 128323766 128329329 - Vps37b protein_coding processed_transcript MGP_LPJ_T0074170.1 MGP_LPJ_G0029988.1 mouse_genomes_project 5 128346691 128351269 - Vps37b protein_coding processed_transcript MGP_LPJ_T0069972.1 MGP_LPJ_G0029193.1 mouse_genomes_project 5 6104905 6138418 - MGP_LPJ_P0069972 Crot protein_coding protein_coding MGP_LPJ_T0069973.1 MGP_LPJ_G0029193.1 mouse_genomes_project 5 6112874 6123184 - Crot protein_coding processed_transcript MGP_LPJ_T0069974.1 MGP_LPJ_G0029193.1 mouse_genomes_project 5 6127220 6138136 - Crot protein_coding retained_intron MGP_LPJ_T0070534.1 MGP_LPJ_G0029299.1 mouse_genomes_project 5 29328530 29330434 - MGP_LPJ_P0070534 Ost4 protein_coding protein_coding MGP_LPJ_T0070535.1 MGP_LPJ_G0029299.1 mouse_genomes_project 5 29329163 29330371 - MGP_LPJ_P0070535 Ost4 protein_coding protein_coding MGP_LPJ_T0073678.1 MGP_LPJ_G0029904.1 mouse_genomes_project 5 124301386 124308764 + MGP_LPJ_P0073678 Sds protein_coding protein_coding MGP_LPJ_T0073679.1 MGP_LPJ_G0029904.1 mouse_genomes_project 5 124301391 124308764 + MGP_LPJ_P0073679 Sds protein_coding protein_coding MGP_LPJ_T0073680.1 MGP_LPJ_G0029904.1 mouse_genomes_project 5 124303718 124305520 + MGP_LPJ_P0073680 Sds protein_coding protein_coding MGP_LPJ_T0073681.1 MGP_LPJ_G0029904.1 mouse_genomes_project 5 124305195 124305721 + Sds protein_coding retained_intron MGP_LPJ_T0001469.1 MGP_LPJ_G0001386.1 mouse_genomes_project 5 5426646 5429074 - TEC TEC MGP_LPJ_T0074161.1 MGP_LPJ_G0029987.1 mouse_genomes_project 5 128289340 128323187 + MGP_LPJ_P0074161 Hip1r protein_coding protein_coding MGP_LPJ_T0074162.1 MGP_LPJ_G0029987.1 mouse_genomes_project 5 128295908 128305661 + MGP_LPJ_P0074162 Hip1r protein_coding protein_coding MGP_LPJ_T0074163.1 MGP_LPJ_G0029987.1 mouse_genomes_project 5 128312465 128315028 + MGP_LPJ_P0074163 Hip1r protein_coding nonsense_mediated_decay MGP_LPJ_T0074164.1 MGP_LPJ_G0029987.1 mouse_genomes_project 5 128317038 128318636 + Hip1r protein_coding retained_intron MGP_LPJ_T0074165.1 MGP_LPJ_G0029987.1 mouse_genomes_project 5 128317414 128319291 + MGP_LPJ_P0074165 Hip1r protein_coding nonsense_mediated_decay MGP_LPJ_T0074166.1 MGP_LPJ_G0029987.1 mouse_genomes_project 5 128318011 128319317 + Hip1r protein_coding retained_intron MGP_LPJ_T0074167.1 MGP_LPJ_G0029987.1 mouse_genomes_project 5 128318227 128319303 + Hip1r protein_coding retained_intron MGP_LPJ_T0015133.1 MGP_LPJ_G0013224.1 mouse_genomes_project 5 146139087 146139561 - processed_pseudogene processed_pseudogene MGP_LPJ_T0072851.1 MGP_LPJ_G0029742.1 mouse_genomes_project 5 110176590 110222131 - MGP_LPJ_P0072851 Glmn protein_coding protein_coding MGP_LPJ_T0072852.1 MGP_LPJ_G0029742.1 mouse_genomes_project 5 110176592 110222069 - MGP_LPJ_P0072852 Glmn protein_coding protein_coding MGP_LPJ_T0072853.1 MGP_LPJ_G0029742.1 mouse_genomes_project 5 110176645 110178779 - Glmn protein_coding retained_intron MGP_LPJ_T0072854.1 MGP_LPJ_G0029742.1 mouse_genomes_project 5 110176646 110222379 - MGP_LPJ_P0072854 Glmn protein_coding protein_coding MGP_LPJ_T0072855.1 MGP_LPJ_G0029742.1 mouse_genomes_project 5 110176647 110222036 - MGP_LPJ_P0072855 Glmn protein_coding nonsense_mediated_decay MGP_LPJ_T0072856.1 MGP_LPJ_G0029742.1 mouse_genomes_project 5 110199654 110222058 - Glmn protein_coding processed_transcript MGP_LPJ_T0072857.1 MGP_LPJ_G0029742.1 mouse_genomes_project 5 110202659 110222131 - Glmn protein_coding processed_transcript MGP_LPJ_T0072858.1 MGP_LPJ_G0029742.1 mouse_genomes_project 5 110202693 110222038 - MGP_LPJ_P0072858 Glmn protein_coding protein_coding MGP_LPJ_T0004787.1 MGP_LPJ_G0004131.1 mouse_genomes_project 5 108327578 108333565 - Lrrc8dos antisense antisense MGP_LPJ_T0014885.1 MGP_LPJ_G0012976.1 mouse_genomes_project 5 31064574 31064969 - processed_pseudogene processed_pseudogene MGP_LPJ_T0071566.1 MGP_LPJ_G0029467.1 mouse_genomes_project 5 64873401 64902811 + MGP_LPJ_P0071566 Klf3 protein_coding protein_coding MGP_LPJ_T0071567.1 MGP_LPJ_G0029467.1 mouse_genomes_project 5 64873590 64893033 + Klf3 protein_coding retained_intron MGP_LPJ_T0071568.1 MGP_LPJ_G0029467.1 mouse_genomes_project 5 64873635 64892096 + Klf3 protein_coding processed_transcript MGP_LPJ_T0071569.1 MGP_LPJ_G0029467.1 mouse_genomes_project 5 64882276 64899392 + MGP_LPJ_P0071569 Klf3 protein_coding protein_coding MGP_LPJ_T0071570.1 MGP_LPJ_G0029467.1 mouse_genomes_project 5 64882277 64889249 + Klf3 protein_coding retained_intron MGP_LPJ_T0071571.1 MGP_LPJ_G0029467.1 mouse_genomes_project 5 64882321 64892167 + MGP_LPJ_P0071571 Klf3 protein_coding protein_coding MGP_LPJ_T0071572.1 MGP_LPJ_G0029467.1 mouse_genomes_project 5 64885777 64895339 + Klf3 protein_coding retained_intron MGP_LPJ_T0071573.1 MGP_LPJ_G0029467.1 mouse_genomes_project 5 64892271 64897077 + MGP_LPJ_P0071573 Klf3 protein_coding nonsense_mediated_decay MGP_LPJ_T0071574.1 MGP_LPJ_G0029467.1 mouse_genomes_project 5 64896718 64899460 + MGP_LPJ_P0071574 Klf3 protein_coding protein_coding MGP_LPJ_T0075689.1 MGP_LPJ_G0030283.1 mouse_genomes_project 5 153038231 153098444 - MGP_LPJ_P0075689 Usp12 protein_coding protein_coding MGP_LPJ_T0075690.1 MGP_LPJ_G0030283.1 mouse_genomes_project 5 153038261 153058325 - Usp12 protein_coding processed_transcript MGP_LPJ_T0075691.1 MGP_LPJ_G0030283.1 mouse_genomes_project 5 153045749 153058333 - Usp12 protein_coding processed_transcript MGP_LPJ_T0001833.1 MGP_LPJ_G0001745.1 mouse_genomes_project 5 125963028 125964198 - TEC TEC MGP_LPJ_T0073153.1 MGP_LPJ_G0029804.1 mouse_genomes_project 5 115417756 115459286 + MGP_LPJ_P0073153 Tpst2 protein_coding protein_coding MGP_LPJ_T0073154.1 MGP_LPJ_G0029804.1 mouse_genomes_project 5 115417769 115453013 + Tpst2 protein_coding retained_intron MGP_LPJ_T0073155.1 MGP_LPJ_G0029804.1 mouse_genomes_project 5 115417772 115459280 + MGP_LPJ_P0073155 Tpst2 protein_coding protein_coding MGP_LPJ_T0073156.1 MGP_LPJ_G0029804.1 mouse_genomes_project 5 115430781 115451711 + MGP_LPJ_P0073156 Tpst2 protein_coding protein_coding MGP_LPJ_T0073157.1 MGP_LPJ_G0029804.1 mouse_genomes_project 5 115447887 115458881 + MGP_LPJ_P0073157 Tpst2 protein_coding protein_coding MGP_LPJ_T0073158.1 MGP_LPJ_G0029804.1 mouse_genomes_project 5 115452265 115453793 + MGP_LPJ_P0073158 Tpst2 protein_coding nonsense_mediated_decay MGP_LPJ_T0073159.1 MGP_LPJ_G0029804.1 mouse_genomes_project 5 115456820 115458888 + Tpst2 protein_coding retained_intron MGP_LPJ_T0015035.1 MGP_LPJ_G0013126.1 mouse_genomes_project 5 101883839 101884297 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001670.1 MGP_LPJ_G0001583.1 mouse_genomes_project 5 66040085 66040999 + TEC TEC MGP_LPJ_T0075281.1 MGP_LPJ_G0030189.1 mouse_genomes_project 5 145063817 145078731 - MGP_LPJ_P0075281 Zfand2a protein_coding protein_coding MGP_LPJ_T0075282.1 MGP_LPJ_G0030189.1 mouse_genomes_project 5 145063822 145078699 - MGP_LPJ_P0075282 Zfand2a protein_coding protein_coding MGP_LPJ_T0075283.1 MGP_LPJ_G0030189.1 mouse_genomes_project 5 145067510 145073109 - Zfand2a protein_coding processed_transcript MGP_LPJ_T0075284.1 MGP_LPJ_G0030189.1 mouse_genomes_project 5 145072647 145078646 - MGP_LPJ_P0075284 Zfand2a protein_coding protein_coding MGP_LPJ_T0075285.1 MGP_LPJ_G0030189.1 mouse_genomes_project 5 145073242 145078610 - Zfand2a protein_coding processed_transcript MGP_LPJ_T0073009.1 MGP_LPJ_G0029779.1 mouse_genomes_project 5 113097279 113098637 - Gtpbp6 protein_coding retained_intron MGP_LPJ_T0073010.1 MGP_LPJ_G0029779.1 mouse_genomes_project 5 113097280 113100504 - Gtpbp6 protein_coding retained_intron MGP_LPJ_T0073011.1 MGP_LPJ_G0029779.1 mouse_genomes_project 5 113097322 113101473 - MGP_LPJ_P0073011 Gtpbp6 protein_coding protein_coding MGP_LPJ_T0073012.1 MGP_LPJ_G0029779.1 mouse_genomes_project 5 113098209 113100478 - Gtpbp6 protein_coding processed_transcript MGP_LPJ_T0073013.1 MGP_LPJ_G0029779.1 mouse_genomes_project 5 113098533 113100718 - MGP_LPJ_P0073013 Gtpbp6 protein_coding protein_coding MGP_LPJ_T0073014.1 MGP_LPJ_G0029779.1 mouse_genomes_project 5 113099092 113100226 - Gtpbp6 protein_coding retained_intron MGP_LPJ_T0073015.1 MGP_LPJ_G0029779.1 mouse_genomes_project 5 113099950 113101442 - Gtpbp6 protein_coding processed_transcript MGP_LPJ_T0073016.1 MGP_LPJ_G0029779.1 mouse_genomes_project 5 113100002 113100909 - Gtpbp6 protein_coding retained_intron MGP_LPJ_T0073017.1 MGP_LPJ_G0029779.1 mouse_genomes_project 5 113100149 113100734 - Gtpbp6 protein_coding retained_intron MGP_LPJ_T0073018.1 MGP_LPJ_G0029779.1 mouse_genomes_project 5 113100337 113101013 - Gtpbp6 protein_coding retained_intron MGP_LPJ_T0073019.1 MGP_LPJ_G0029779.1 mouse_genomes_project 5 113100350 113101463 - Gtpbp6 protein_coding retained_intron MGP_LPJ_T0102206.1 MGP_LPJ_G0040243.1 mouse_genomes_project 5 158233225 158239894 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0001782.1 MGP_LPJ_G0001694.1 mouse_genomes_project 5 114012830 114013382 + TEC TEC MGP_LPJ_T0072201.1 MGP_LPJ_G0029581.1 mouse_genomes_project 5 88533269 88547654 - MGP_LPJ_P0072201 Ugt2b37 protein_coding protein_coding MGP_LPJ_T0098422.1 MGP_LPJ_G0036703.1 mouse_genomes_project 5 1958031 1958158 - Gm22897 scaRNA scaRNA MGP_LPJ_T0018090.1 MGP_LPJ_G0015514.1 mouse_genomes_project 5 51613124 51618684 + 9230114K14Rik processed_transcript lincRNA MGP_LPJ_T0018091.1 MGP_LPJ_G0015514.1 mouse_genomes_project 5 51613131 51712155 + 9230114K14Rik processed_transcript lincRNA MGP_LPJ_T0018092.1 MGP_LPJ_G0015514.1 mouse_genomes_project 5 51613131 51622161 + 9230114K14Rik processed_transcript retained_intron MGP_LPJ_T0018093.1 MGP_LPJ_G0015514.1 mouse_genomes_project 5 51613165 51673488 + 9230114K14Rik processed_transcript lincRNA MGP_LPJ_T0075692.1 MGP_LPJ_G0030284.1 mouse_genomes_project 5 153137942 153142088 + MGP_LPJ_P0075692 Rpl21 protein_coding protein_coding MGP_LPJ_T0075693.1 MGP_LPJ_G0030284.1 mouse_genomes_project 5 153138198 153139660 + Rpl21 protein_coding retained_intron MGP_LPJ_T0075694.1 MGP_LPJ_G0030284.1 mouse_genomes_project 5 153138247 153141041 + MGP_LPJ_P0075694 Rpl21 protein_coding protein_coding MGP_LPJ_T0075695.1 MGP_LPJ_G0030284.1 mouse_genomes_project 5 153138254 153141042 + MGP_LPJ_P0075695 Rpl21 protein_coding protein_coding MGP_LPJ_T0075696.1 MGP_LPJ_G0030284.1 mouse_genomes_project 5 153139236 153140019 + Rpl21 protein_coding retained_intron MGP_LPJ_T0075697.1 MGP_LPJ_G0030284.1 mouse_genomes_project 5 153140261 153141042 + Rpl21 protein_coding retained_intron MGP_LPJ_T0099622.1 MGP_LPJ_G0037885.1 mouse_genomes_project 5 135475802 135475906 + Gm23761 snRNA snRNA MGP_LPJ_T0072548.1 MGP_LPJ_G0029672.1 mouse_genomes_project 5 99836223 99983263 - MGP_LPJ_P0072548 Antxr2 protein_coding protein_coding MGP_LPJ_T0072549.1 MGP_LPJ_G0029672.1 mouse_genomes_project 5 99868308 99983344 - MGP_LPJ_P0072549 Antxr2 protein_coding protein_coding MGP_LPJ_T0072550.1 MGP_LPJ_G0029672.1 mouse_genomes_project 5 99907176 99952863 - Antxr2 protein_coding processed_transcript MGP_LPJ_T0070637.1 MGP_LPJ_G0029316.1 mouse_genomes_project 5 29636447 29642109 + MGP_LPJ_P0070637 Snx17 protein_coding protein_coding MGP_LPJ_T0070638.1 MGP_LPJ_G0029316.1 mouse_genomes_project 5 29636462 29638655 + MGP_LPJ_P0070638 Snx17 protein_coding protein_coding MGP_LPJ_T0070639.1 MGP_LPJ_G0029316.1 mouse_genomes_project 5 29636514 29642103 + MGP_LPJ_P0070639 Snx17 protein_coding nonsense_mediated_decay MGP_LPJ_T0070640.1 MGP_LPJ_G0029316.1 mouse_genomes_project 5 29636526 29642108 + Snx17 protein_coding retained_intron MGP_LPJ_T0070641.1 MGP_LPJ_G0029316.1 mouse_genomes_project 5 29636526 29640265 + MGP_LPJ_P0070641 Snx17 protein_coding protein_coding MGP_LPJ_T0070642.1 MGP_LPJ_G0029316.1 mouse_genomes_project 5 29636555 29642109 + MGP_LPJ_P0070642 Snx17 protein_coding nonsense_mediated_decay MGP_LPJ_T0070643.1 MGP_LPJ_G0029316.1 mouse_genomes_project 5 29637074 29642352 + Snx17 protein_coding retained_intron MGP_LPJ_T0070644.1 MGP_LPJ_G0029316.1 mouse_genomes_project 5 29638063 29639643 + Snx17 protein_coding retained_intron MGP_LPJ_T0070645.1 MGP_LPJ_G0029316.1 mouse_genomes_project 5 29638593 29640459 + Snx17 protein_coding retained_intron MGP_LPJ_T0070646.1 MGP_LPJ_G0029316.1 mouse_genomes_project 5 29639051 29640919 + Snx17 protein_coding retained_intron MGP_LPJ_T0070647.1 MGP_LPJ_G0029316.1 mouse_genomes_project 5 29639259 29641353 + Snx17 protein_coding processed_transcript MGP_LPJ_T0074846.1 MGP_LPJ_G0030106.1 mouse_genomes_project 5 141188172 141192726 + MGP_LPJ_P0074846 Alkbh4 protein_coding protein_coding MGP_LPJ_T0074847.1 MGP_LPJ_G0030106.1 mouse_genomes_project 5 141188180 141193906 + MGP_LPJ_P0074847 Alkbh4 protein_coding protein_coding MGP_LPJ_T0074848.1 MGP_LPJ_G0030106.1 mouse_genomes_project 5 141188184 141193072 + MGP_LPJ_P0074848 Alkbh4 protein_coding nonsense_mediated_decay MGP_LPJ_T0074849.1 MGP_LPJ_G0030106.1 mouse_genomes_project 5 141188228 141192717 + MGP_LPJ_P0074849 Alkbh4 protein_coding protein_coding MGP_LPJ_T0074850.1 MGP_LPJ_G0030106.1 mouse_genomes_project 5 141190994 141193909 + MGP_LPJ_P0074850 Alkbh4 protein_coding protein_coding MGP_LPJ_T0075882.1 MGP_LPJ_G0030316.1 mouse_genomes_project 5 157174982 157197840 - MGP_LPJ_P0075882 N4bp2l1 protein_coding protein_coding MGP_LPJ_T0075883.1 MGP_LPJ_G0030316.1 mouse_genomes_project 5 157174985 157180330 - MGP_LPJ_P0075883 N4bp2l1 protein_coding protein_coding MGP_LPJ_T0075884.1 MGP_LPJ_G0030316.1 mouse_genomes_project 5 157176003 157197777 - MGP_LPJ_P0075884 N4bp2l1 protein_coding nonsense_mediated_decay MGP_LPJ_T0075885.1 MGP_LPJ_G0030316.1 mouse_genomes_project 5 157177338 157200503 - MGP_LPJ_P0075885 N4bp2l1 protein_coding protein_coding MGP_LPJ_T0075886.1 MGP_LPJ_G0030316.1 mouse_genomes_project 5 157195066 157197843 - MGP_LPJ_P0075886 N4bp2l1 protein_coding nonsense_mediated_decay MGP_LPJ_T0075887.1 MGP_LPJ_G0030316.1 mouse_genomes_project 5 157195069 157197815 - MGP_LPJ_P0075887 N4bp2l1 protein_coding nonsense_mediated_decay MGP_LPJ_T0075888.1 MGP_LPJ_G0030316.1 mouse_genomes_project 5 157195757 157197084 - N4bp2l1 protein_coding retained_intron MGP_LPJ_T0004725.1 MGP_LPJ_G0004089.1 mouse_genomes_project 5 66359915 66385828 + Gm26725 antisense antisense MGP_LPJ_T0018111.1 MGP_LPJ_G0015520.1 mouse_genomes_project 5 74513972 74514552 + Usp46os2 processed_transcript retained_intron MGP_LPJ_T0018112.1 MGP_LPJ_G0015520.1 mouse_genomes_project 5 74513973 74514552 + Usp46os2 processed_transcript processed_transcript MGP_LPJ_T0018113.1 MGP_LPJ_G0015520.1 mouse_genomes_project 5 74513978 74522857 + Usp46os2 processed_transcript antisense MGP_LPJ_T0073567.1 MGP_LPJ_G0029880.1 mouse_genomes_project 5 119533410 119578972 - MGP_LPJ_P0073567 Tmem233 protein_coding protein_coding MGP_LPJ_T0001676.1 MGP_LPJ_G0001589.1 mouse_genomes_project 5 66280965 66285223 - TEC TEC MGP_LPJ_T0001502.1 MGP_LPJ_G0001419.1 mouse_genomes_project 5 20847021 20851747 - TEC TEC MGP_LPJ_T0001752.1 MGP_LPJ_G0001664.1 mouse_genomes_project 5 98977202 98977828 + TEC TEC MGP_LPJ_T0070280.1 MGP_LPJ_G0029247.1 mouse_genomes_project 5 22672245 22680065 - MGP_LPJ_P0070280 Asb10 protein_coding protein_coding MGP_LPJ_T0070281.1 MGP_LPJ_G0029247.1 mouse_genomes_project 5 22673190 22680586 - MGP_LPJ_P0070281 Asb10 protein_coding protein_coding MGP_LPJ_T0070282.1 MGP_LPJ_G0029247.1 mouse_genomes_project 5 22673208 22680200 - MGP_LPJ_P0070282 Asb10 protein_coding protein_coding MGP_LPJ_T0008455.1 MGP_LPJ_G0006858.1 mouse_genomes_project 5 153626050 153626594 + Gm27033 lincRNA lincRNA MGP_LPJ_T0014883.1 MGP_LPJ_G0012974.1 mouse_genomes_project 5 30942661 30947330 + processed_pseudogene processed_pseudogene MGP_LPJ_T0072991.1 MGP_LPJ_G0029767.1 mouse_genomes_project 5 111607223 111617360 - MGP_LPJ_P0072991 protein_coding protein_coding MGP_LPJ_T0072739.1 MGP_LPJ_G0029712.1 mouse_genomes_project 5 106453452 106465940 + MGP_LPJ_P0072739 Dmp1 protein_coding protein_coding MGP_LPJ_T0004877.1 MGP_LPJ_G0004197.1 mouse_genomes_project 5 139655897 139740758 + Gm43278 antisense antisense MGP_LPJ_T0072374.1 MGP_LPJ_G0029635.1 mouse_genomes_project 5 92502170 92508518 + MGP_LPJ_P0072374 Epgn protein_coding protein_coding MGP_LPJ_T0072375.1 MGP_LPJ_G0029635.1 mouse_genomes_project 5 92502170 92509520 + MGP_LPJ_P0072375 Epgn protein_coding protein_coding MGP_LPJ_T0008435.1 MGP_LPJ_G0006841.1 mouse_genomes_project 5 143539372 143542999 - lincRNA lincRNA MGP_LPJ_T0015033.1 MGP_LPJ_G0013124.1 mouse_genomes_project 5 101013075 101013495 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001575.1 MGP_LPJ_G0001489.1 mouse_genomes_project 5 44908643 44910671 + TEC TEC MGP_LPJ_T0099552.1 MGP_LPJ_G0037815.1 mouse_genomes_project 5 6981327 6981429 - Gm23312 snRNA snRNA MGP_LPJ_T0010733.1 MGP_LPJ_G0008851.1 mouse_genomes_project 5 126864106 126864225 + Mir8115 miRNA miRNA MGP_LPJ_T0008052.1 MGP_LPJ_G0006575.1 mouse_genomes_project 5 2571728 2574883 + lincRNA lincRNA MGP_LPJ_T0004723.1 MGP_LPJ_G0004087.1 mouse_genomes_project 5 63949691 63950761 + Gm15819 antisense antisense MGP_LPJ_T0072567.1 MGP_LPJ_G0029679.1 mouse_genomes_project 5 101219319 101257698 - MGP_LPJ_P0072567 protein_coding protein_coding MGP_LPJ_T0072568.1 MGP_LPJ_G0029679.1 mouse_genomes_project 5 101219319 101257698 - MGP_LPJ_P0072568 protein_coding protein_coding MGP_LPJ_T0072569.1 MGP_LPJ_G0029679.1 mouse_genomes_project 5 101220667 101245127 - MGP_LPJ_P0072569 protein_coding protein_coding MGP_LPJ_T0072570.1 MGP_LPJ_G0029679.1 mouse_genomes_project 5 101229687 101235964 - protein_coding retained_intron MGP_LPJ_T0015011.1 MGP_LPJ_G0013102.1 mouse_genomes_project 5 89473924 89474303 + processed_pseudogene processed_pseudogene MGP_LPJ_T0075434.1 MGP_LPJ_G0030224.1 mouse_genomes_project 5 148892430 149016093 - MGP_LPJ_P0075434 Rnf216 protein_coding protein_coding MGP_LPJ_T0075435.1 MGP_LPJ_G0030224.1 mouse_genomes_project 5 148893359 149016079 - MGP_LPJ_P0075435 Rnf216 protein_coding protein_coding MGP_LPJ_T0075436.1 MGP_LPJ_G0030224.1 mouse_genomes_project 5 148894156 149000669 - MGP_LPJ_P0075436 Rnf216 protein_coding nonsense_mediated_decay MGP_LPJ_T0075437.1 MGP_LPJ_G0030224.1 mouse_genomes_project 5 148894188 149000669 - MGP_LPJ_P0075437 Rnf216 protein_coding nonsense_mediated_decay MGP_LPJ_T0075438.1 MGP_LPJ_G0030224.1 mouse_genomes_project 5 148912674 148914076 - Rnf216 protein_coding retained_intron MGP_LPJ_T0075439.1 MGP_LPJ_G0030224.1 mouse_genomes_project 5 148968499 149016079 - Rnf216 protein_coding retained_intron MGP_LPJ_T0075440.1 MGP_LPJ_G0030224.1 mouse_genomes_project 5 148983184 148990001 - Rnf216 protein_coding retained_intron MGP_LPJ_T0075441.1 MGP_LPJ_G0030224.1 mouse_genomes_project 5 148992446 149016079 - Rnf216 protein_coding processed_transcript MGP_LPJ_T0075442.1 MGP_LPJ_G0030224.1 mouse_genomes_project 5 148992635 149016081 - Rnf216 protein_coding processed_transcript MGP_LPJ_T0075208.1 MGP_LPJ_G0030177.1 mouse_genomes_project 5 144531703 144553869 - MGP_LPJ_P0075208 Pdgfa protein_coding protein_coding MGP_LPJ_T0075209.1 MGP_LPJ_G0030177.1 mouse_genomes_project 5 144532205 144553785 - MGP_LPJ_P0075209 Pdgfa protein_coding protein_coding MGP_LPJ_T0075210.1 MGP_LPJ_G0030177.1 mouse_genomes_project 5 144532623 144556327 - MGP_LPJ_P0075210 Pdgfa protein_coding protein_coding MGP_LPJ_T0075211.1 MGP_LPJ_G0030177.1 mouse_genomes_project 5 144532652 144557610 - MGP_LPJ_P0075211 Pdgfa protein_coding protein_coding MGP_LPJ_T0075212.1 MGP_LPJ_G0030177.1 mouse_genomes_project 5 144532826 144553113 - Pdgfa protein_coding processed_transcript MGP_LPJ_T0075213.1 MGP_LPJ_G0030177.1 mouse_genomes_project 5 144544263 144553316 - Pdgfa protein_coding processed_transcript MGP_LPJ_T0075214.1 MGP_LPJ_G0030177.1 mouse_genomes_project 5 144546434 144556241 - Pdgfa protein_coding processed_transcript MGP_LPJ_T0004869.1 MGP_LPJ_G0004189.1 mouse_genomes_project 5 133315087 133323353 + Gm42875 antisense antisense MGP_LPJ_T0102184.1 MGP_LPJ_G0040221.1 mouse_genomes_project 5 88612651 88635727 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0072699.1 MGP_LPJ_G0029701.1 mouse_genomes_project 5 105627875 105754019 + Ptpn13 protein_coding retained_intron MGP_LPJ_T0072700.1 MGP_LPJ_G0029701.1 mouse_genomes_project 5 105627923 105741081 + MGP_LPJ_P0072700 Ptpn13 protein_coding nonsense_mediated_decay MGP_LPJ_T0072701.1 MGP_LPJ_G0029701.1 mouse_genomes_project 5 105627939 105712982 + Ptpn13 protein_coding retained_intron MGP_LPJ_T0072702.1 MGP_LPJ_G0029701.1 mouse_genomes_project 5 105628095 105810692 + MGP_LPJ_P0072702 Ptpn13 protein_coding protein_coding MGP_LPJ_T0072703.1 MGP_LPJ_G0029701.1 mouse_genomes_project 5 105740906 105755924 + Ptpn13 protein_coding retained_intron MGP_LPJ_T0008102.1 MGP_LPJ_G0006609.1 mouse_genomes_project 5 32025407 32026247 - Gm43851 lincRNA lincRNA MGP_LPJ_T0004919.1 MGP_LPJ_G0004226.1 mouse_genomes_project 5 156014754 156071512 - Gm15997 antisense antisense MGP_LPJ_T0014806.1 MGP_LPJ_G0012897.1 mouse_genomes_project 5 6523030 6523272 + processed_pseudogene processed_pseudogene MGP_LPJ_T0074964.1 MGP_LPJ_G0030127.1 mouse_genomes_project 5 142505431 142510172 - MGP_LPJ_P0074964 Trip6 protein_coding protein_coding MGP_LPJ_T0074965.1 MGP_LPJ_G0030127.1 mouse_genomes_project 5 142508720 142509959 - MGP_LPJ_P0074965 Trip6 protein_coding protein_coding MGP_LPJ_T0074966.1 MGP_LPJ_G0030127.1 mouse_genomes_project 5 142508747 142509930 - Trip6 protein_coding retained_intron MGP_LPJ_T0074967.1 MGP_LPJ_G0030127.1 mouse_genomes_project 5 142509126 142509976 - Trip6 protein_coding processed_transcript MGP_LPJ_T0008416.1 MGP_LPJ_G0006826.1 mouse_genomes_project 5 133968906 133970066 + Gm43001 lincRNA lincRNA MGP_LPJ_T0008417.1 MGP_LPJ_G0006826.1 mouse_genomes_project 5 133969464 133969977 + Gm43001 lincRNA lincRNA MGP_LPJ_T0001717.1 MGP_LPJ_G0001629.1 mouse_genomes_project 5 74105109 74105688 - TEC TEC MGP_LPJ_T0074905.1 MGP_LPJ_G0030115.1 mouse_genomes_project 5 142108315 142119142 + MGP_LPJ_P0074905 Cldn15 protein_coding protein_coding MGP_LPJ_T0074906.1 MGP_LPJ_G0030115.1 mouse_genomes_project 5 142109609 142119128 + MGP_LPJ_P0074906 Cldn15 protein_coding protein_coding MGP_LPJ_T0074907.1 MGP_LPJ_G0030115.1 mouse_genomes_project 5 142117239 142118297 + Cldn15 protein_coding processed_transcript MGP_LPJ_T0010709.1 MGP_LPJ_G0008827.1 mouse_genomes_project 5 76499958 76500059 + Gm25374 miRNA miRNA MGP_LPJ_T0073674.1 MGP_LPJ_G0029902.1 mouse_genomes_project 5 124251995 124261415 + MGP_LPJ_P0073674 Lhx5 protein_coding protein_coding MGP_LPJ_T0008150.1 MGP_LPJ_G0006644.1 mouse_genomes_project 5 52778635 52780335 + lincRNA lincRNA MGP_LPJ_T0008470.1 MGP_LPJ_G0006871.1 mouse_genomes_project 5 155622540 155695502 - 5730422E09Rik lincRNA lincRNA MGP_LPJ_T0008471.1 MGP_LPJ_G0006871.1 mouse_genomes_project 5 155622544 155626758 - 5730422E09Rik lincRNA lincRNA MGP_LPJ_T0071240.1 MGP_LPJ_G0029409.1 mouse_genomes_project 5 37116262 37127105 + MGP_LPJ_P0071240 Tmem128 protein_coding protein_coding MGP_LPJ_T0071241.1 MGP_LPJ_G0029409.1 mouse_genomes_project 5 37116448 37118378 + Tmem128 protein_coding retained_intron MGP_LPJ_T0071242.1 MGP_LPJ_G0029409.1 mouse_genomes_project 5 37116461 37124135 + MGP_LPJ_P0071242 Tmem128 protein_coding protein_coding MGP_LPJ_T0071243.1 MGP_LPJ_G0029409.1 mouse_genomes_project 5 37116465 37121619 + Tmem128 protein_coding retained_intron MGP_LPJ_T0071244.1 MGP_LPJ_G0029409.1 mouse_genomes_project 5 37121125 37124132 + MGP_LPJ_P0071244 Tmem128 protein_coding protein_coding MGP_LPJ_T0001654.1 MGP_LPJ_G0001567.1 mouse_genomes_project 5 64874027 64875749 + TEC TEC MGP_LPJ_T0008056.1 MGP_LPJ_G0006579.1 mouse_genomes_project 5 6437545 6439346 - Gm15734 lincRNA lincRNA MGP_LPJ_T0074641.1 MGP_LPJ_G0030065.1 mouse_genomes_project 5 139561269 139595137 - MGP_LPJ_P0074641 Limk1 protein_coding protein_coding MGP_LPJ_T0074642.1 MGP_LPJ_G0030065.1 mouse_genomes_project 5 139561270 139583513 - MGP_LPJ_P0074642 Limk1 protein_coding protein_coding MGP_LPJ_T0074643.1 MGP_LPJ_G0030065.1 mouse_genomes_project 5 139561429 139583485 - MGP_LPJ_P0074643 Limk1 protein_coding nonsense_mediated_decay MGP_LPJ_T0074644.1 MGP_LPJ_G0030065.1 mouse_genomes_project 5 139565213 139569345 - MGP_LPJ_P0074644 Limk1 protein_coding protein_coding MGP_LPJ_T0074645.1 MGP_LPJ_G0030065.1 mouse_genomes_project 5 139569083 139573559 - Limk1 protein_coding retained_intron MGP_LPJ_T0074646.1 MGP_LPJ_G0030065.1 mouse_genomes_project 5 139573312 139595113 - Limk1 protein_coding retained_intron MGP_LPJ_T0008383.1 MGP_LPJ_G0006809.1 mouse_genomes_project 5 130331386 130360200 + 1700048F04Rik lincRNA lincRNA MGP_LPJ_T0001779.1 MGP_LPJ_G0001691.1 mouse_genomes_project 5 111003227 111004604 - TEC TEC MGP_LPJ_T0008157.1 MGP_LPJ_G0006650.1 mouse_genomes_project 5 60837068 60841780 - 1700014F14Rik lincRNA lincRNA MGP_LPJ_T0075226.1 MGP_LPJ_G0030180.1 mouse_genomes_project 5 144777978 144828141 + MGP_LPJ_P0075226 Sun1 protein_coding protein_coding MGP_LPJ_T0075227.1 MGP_LPJ_G0030180.1 mouse_genomes_project 5 144778012 144805655 + Sun1 protein_coding retained_intron MGP_LPJ_T0075228.1 MGP_LPJ_G0030180.1 mouse_genomes_project 5 144778012 144805656 + MGP_LPJ_P0075228 Sun1 protein_coding protein_coding MGP_LPJ_T0075229.1 MGP_LPJ_G0030180.1 mouse_genomes_project 5 144778014 144801055 + MGP_LPJ_P0075229 Sun1 protein_coding protein_coding MGP_LPJ_T0075230.1 MGP_LPJ_G0030180.1 mouse_genomes_project 5 144778016 144803914 + MGP_LPJ_P0075230 Sun1 protein_coding protein_coding MGP_LPJ_T0075231.1 MGP_LPJ_G0030180.1 mouse_genomes_project 5 144778020 144794060 + Sun1 protein_coding retained_intron MGP_LPJ_T0075232.1 MGP_LPJ_G0030180.1 mouse_genomes_project 5 144778025 144826893 + MGP_LPJ_P0075232 Sun1 protein_coding protein_coding MGP_LPJ_T0075233.1 MGP_LPJ_G0030180.1 mouse_genomes_project 5 144778030 144803920 + MGP_LPJ_P0075233 Sun1 protein_coding protein_coding MGP_LPJ_T0075234.1 MGP_LPJ_G0030180.1 mouse_genomes_project 5 144790269 144790617 + Sun1 protein_coding processed_transcript MGP_LPJ_T0075235.1 MGP_LPJ_G0030180.1 mouse_genomes_project 5 144790301 144802713 + MGP_LPJ_P0075235 Sun1 protein_coding protein_coding MGP_LPJ_T0075236.1 MGP_LPJ_G0030180.1 mouse_genomes_project 5 144790355 144826987 + MGP_LPJ_P0075236 Sun1 protein_coding protein_coding MGP_LPJ_T0075237.1 MGP_LPJ_G0030180.1 mouse_genomes_project 5 144790595 144802677 + MGP_LPJ_P0075237 Sun1 protein_coding protein_coding MGP_LPJ_T0075238.1 MGP_LPJ_G0030180.1 mouse_genomes_project 5 144800993 144808148 + Sun1 protein_coding processed_transcript MGP_LPJ_T0075239.1 MGP_LPJ_G0030180.1 mouse_genomes_project 5 144802591 144807255 + MGP_LPJ_P0075239 Sun1 protein_coding protein_coding MGP_LPJ_T0075240.1 MGP_LPJ_G0030180.1 mouse_genomes_project 5 144804058 144812941 + MGP_LPJ_P0075240 Sun1 protein_coding protein_coding MGP_LPJ_T0075241.1 MGP_LPJ_G0030180.1 mouse_genomes_project 5 144808419 144811859 + Sun1 protein_coding retained_intron MGP_LPJ_T0075242.1 MGP_LPJ_G0030180.1 mouse_genomes_project 5 144812892 144823711 + MGP_LPJ_P0075242 Sun1 protein_coding protein_coding MGP_LPJ_T0075243.1 MGP_LPJ_G0030180.1 mouse_genomes_project 5 144818669 144826850 + MGP_LPJ_P0075243 Sun1 protein_coding nonsense_mediated_decay MGP_LPJ_T0069797.1 MGP_LPJ_G0029166.1 mouse_genomes_project 5 545278 658082 - MGP_LPJ_P0069797 Ankib1 protein_coding protein_coding MGP_LPJ_T0069798.1 MGP_LPJ_G0029166.1 mouse_genomes_project 5 548747 557986 - Ankib1 protein_coding retained_intron MGP_LPJ_T0069799.1 MGP_LPJ_G0029166.1 mouse_genomes_project 5 549158 648073 - MGP_LPJ_P0069799 Ankib1 protein_coding protein_coding MGP_LPJ_T0069800.1 MGP_LPJ_G0029166.1 mouse_genomes_project 5 550079 550508 - Ankib1 protein_coding retained_intron MGP_LPJ_T0069801.1 MGP_LPJ_G0029166.1 mouse_genomes_project 5 555829 557723 - Ankib1 protein_coding retained_intron MGP_LPJ_T0069802.1 MGP_LPJ_G0029166.1 mouse_genomes_project 5 590895 657944 - Ankib1 protein_coding retained_intron MGP_LPJ_T0001931.1 MGP_LPJ_G0001841.1 mouse_genomes_project 5 154627364 154628049 + TEC TEC MGP_LPJ_T0014837.1 MGP_LPJ_G0012928.1 mouse_genomes_project 5 19731116 19731399 - processed_pseudogene processed_pseudogene MGP_LPJ_T0071929.1 MGP_LPJ_G0029527.1 mouse_genomes_project 5 74064757 74090670 - MGP_LPJ_P0071929 Lrrc66 protein_coding protein_coding MGP_LPJ_T0071930.1 MGP_LPJ_G0029527.1 mouse_genomes_project 5 74087782 74088419 - MGP_LPJ_P0071930 Lrrc66 protein_coding protein_coding MGP_LPJ_T0075034.1 MGP_LPJ_G0030139.1 mouse_genomes_project 5 142859641 142878358 - MGP_LPJ_P0075034 Fbxo24 protein_coding protein_coding MGP_LPJ_T0075035.1 MGP_LPJ_G0030139.1 mouse_genomes_project 5 142859641 142874472 - MGP_LPJ_P0075035 Fbxo24 protein_coding protein_coding MGP_LPJ_T0075036.1 MGP_LPJ_G0030139.1 mouse_genomes_project 5 142859644 142878312 - MGP_LPJ_P0075036 Fbxo24 protein_coding nonsense_mediated_decay MGP_LPJ_T0004772.1 MGP_LPJ_G0004124.1 mouse_genomes_project 5 102141977 102160341 + Tmem150cos antisense antisense MGP_LPJ_T0004773.1 MGP_LPJ_G0004124.1 mouse_genomes_project 5 102157091 102160465 + Tmem150cos antisense antisense MGP_LPJ_T0010708.1 MGP_LPJ_G0008826.1 mouse_genomes_project 5 75731650 75731724 + Mir7025 miRNA miRNA MGP_LPJ_T0018120.1 MGP_LPJ_G0015525.1 mouse_genomes_project 5 110360119 110362058 + A430072P03Rik processed_transcript processed_transcript MGP_LPJ_T0018121.1 MGP_LPJ_G0015525.1 mouse_genomes_project 5 110361354 110363725 + A430072P03Rik processed_transcript processed_transcript MGP_LPJ_T0073319.1 MGP_LPJ_G0029837.1 mouse_genomes_project 5 117582490 117667500 + MGP_LPJ_P0073319 Myo1h protein_coding protein_coding MGP_LPJ_T0073320.1 MGP_LPJ_G0029837.1 mouse_genomes_project 5 117616673 117667279 + MGP_LPJ_P0073320 Myo1h protein_coding protein_coding MGP_LPJ_T0073321.1 MGP_LPJ_G0029837.1 mouse_genomes_project 5 117616673 117668841 + MGP_LPJ_P0073321 Myo1h protein_coding protein_coding MGP_LPJ_T0073322.1 MGP_LPJ_G0029837.1 mouse_genomes_project 5 117661058 117668841 + Myo1h protein_coding retained_intron MGP_LPJ_T0073323.1 MGP_LPJ_G0029837.1 mouse_genomes_project 5 117661106 117667585 + Myo1h protein_coding retained_intron MGP_LPJ_T0073324.1 MGP_LPJ_G0029837.1 mouse_genomes_project 5 117661106 117667585 + MGP_LPJ_P0073324 Myo1h protein_coding protein_coding MGP_LPJ_T0073325.1 MGP_LPJ_G0029837.1 mouse_genomes_project 5 117661106 117667585 + MGP_LPJ_P0073325 Myo1h protein_coding protein_coding MGP_LPJ_T0073326.1 MGP_LPJ_G0029837.1 mouse_genomes_project 5 117661106 117667585 + MGP_LPJ_P0073326 Myo1h protein_coding protein_coding MGP_LPJ_T0073327.1 MGP_LPJ_G0029837.1 mouse_genomes_project 5 117661649 117663979 + Myo1h protein_coding retained_intron MGP_LPJ_T0073328.1 MGP_LPJ_G0029837.1 mouse_genomes_project 5 117667679 117669622 + Myo1h protein_coding processed_transcript MGP_LPJ_T0008347.1 MGP_LPJ_G0006784.1 mouse_genomes_project 5 122589342 122590996 - Gm43782 lincRNA lincRNA MGP_LPJ_T0014852.1 MGP_LPJ_G0012943.1 mouse_genomes_project 5 22198876 22199361 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008375.1 MGP_LPJ_G0006802.1 mouse_genomes_project 5 127360911 127364416 + 4932422M17Rik lincRNA lincRNA MGP_LPJ_T0015115.1 MGP_LPJ_G0013206.1 mouse_genomes_project 5 140920982 140921139 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001822.1 MGP_LPJ_G0001734.1 mouse_genomes_project 5 123360998 123363372 - TEC TEC MGP_LPJ_T0074154.1 MGP_LPJ_G0029986.1 mouse_genomes_project 5 128244664 128285597 + MGP_LPJ_P0074154 Ccdc62 protein_coding protein_coding MGP_LPJ_T0074155.1 MGP_LPJ_G0029986.1 mouse_genomes_project 5 128244674 128250711 + Ccdc62 protein_coding retained_intron MGP_LPJ_T0074156.1 MGP_LPJ_G0029986.1 mouse_genomes_project 5 128244674 128285597 + MGP_LPJ_P0074156 Ccdc62 protein_coding protein_coding MGP_LPJ_T0074157.1 MGP_LPJ_G0029986.1 mouse_genomes_project 5 128244684 128281490 + MGP_LPJ_P0074157 Ccdc62 protein_coding unknown_likely_coding MGP_LPJ_T0074158.1 MGP_LPJ_G0029986.1 mouse_genomes_project 5 128258784 128267005 + Ccdc62 protein_coding processed_transcript MGP_LPJ_T0074159.1 MGP_LPJ_G0029986.1 mouse_genomes_project 5 128266982 128272348 + Ccdc62 protein_coding retained_intron MGP_LPJ_T0074160.1 MGP_LPJ_G0029986.1 mouse_genomes_project 5 128277198 128281698 + Ccdc62 protein_coding retained_intron MGP_LPJ_T0015169.1 MGP_LPJ_G0013260.1 mouse_genomes_project 5 156207300 156207759 - processed_pseudogene processed_pseudogene MGP_LPJ_T0073693.1 MGP_LPJ_G0029907.1 mouse_genomes_project 5 124363152 124422218 - MGP_LPJ_P0073693 Tpcn1 protein_coding protein_coding MGP_LPJ_T0073694.1 MGP_LPJ_G0029907.1 mouse_genomes_project 5 124379132 124422157 - Tpcn1 protein_coding retained_intron MGP_LPJ_T0073695.1 MGP_LPJ_G0029907.1 mouse_genomes_project 5 124416476 124422139 - Tpcn1 protein_coding retained_intron MGP_LPJ_T0073696.1 MGP_LPJ_G0029907.1 mouse_genomes_project 5 124420701 124422144 - Tpcn1 protein_coding retained_intron MGP_LPJ_T0100848.1 MGP_LPJ_G0039111.1 mouse_genomes_project 5 94657386 94657522 + Gm22915 snoRNA snoRNA MGP_LPJ_T0071903.1 MGP_LPJ_G0029523.1 mouse_genomes_project 5 73723347 73744291 + MGP_LPJ_P0071903 Ociad1 protein_coding protein_coding MGP_LPJ_T0071904.1 MGP_LPJ_G0029523.1 mouse_genomes_project 5 73723355 73744403 + MGP_LPJ_P0071904 Ociad1 protein_coding protein_coding MGP_LPJ_T0071905.1 MGP_LPJ_G0029523.1 mouse_genomes_project 5 73723356 73739928 + MGP_LPJ_P0071905 Ociad1 protein_coding protein_coding MGP_LPJ_T0071906.1 MGP_LPJ_G0029523.1 mouse_genomes_project 5 73723370 73737345 + MGP_LPJ_P0071906 Ociad1 protein_coding protein_coding MGP_LPJ_T0071907.1 MGP_LPJ_G0029523.1 mouse_genomes_project 5 73723395 73744248 + MGP_LPJ_P0071907 Ociad1 protein_coding protein_coding MGP_LPJ_T0071908.1 MGP_LPJ_G0029523.1 mouse_genomes_project 5 73723404 73740979 + MGP_LPJ_P0071908 Ociad1 protein_coding protein_coding MGP_LPJ_T0071909.1 MGP_LPJ_G0029523.1 mouse_genomes_project 5 73723458 73744275 + MGP_LPJ_P0071909 Ociad1 protein_coding protein_coding MGP_LPJ_T0071910.1 MGP_LPJ_G0029523.1 mouse_genomes_project 5 73723616 73725543 + MGP_LPJ_P0071910 Ociad1 protein_coding protein_coding MGP_LPJ_T0071911.1 MGP_LPJ_G0029523.1 mouse_genomes_project 5 73725566 73744275 + MGP_LPJ_P0071911 Ociad1 protein_coding nonsense_mediated_decay MGP_LPJ_T0071912.1 MGP_LPJ_G0029523.1 mouse_genomes_project 5 73734687 73735720 + Ociad1 protein_coding retained_intron MGP_LPJ_T0004747.1 MGP_LPJ_G0004107.1 mouse_genomes_project 5 77752515 77760947 + Hopxos antisense antisense MGP_LPJ_T0004712.1 MGP_LPJ_G0004078.1 mouse_genomes_project 5 44620066 44637334 + Gm42413 antisense antisense MGP_LPJ_T0075200.1 MGP_LPJ_G0030175.1 mouse_genomes_project 5 144296734 144355533 + MGP_LPJ_P0075200 Fam20c protein_coding protein_coding MGP_LPJ_T0075201.1 MGP_LPJ_G0030175.1 mouse_genomes_project 5 144297303 144354837 + MGP_LPJ_P0075201 Fam20c protein_coding nonsense_mediated_decay MGP_LPJ_T0075202.1 MGP_LPJ_G0030175.1 mouse_genomes_project 5 144297307 144301070 + Fam20c protein_coding retained_intron MGP_LPJ_T0075203.1 MGP_LPJ_G0030175.1 mouse_genomes_project 5 144331494 144354615 + Fam20c protein_coding processed_transcript MGP_LPJ_T0075204.1 MGP_LPJ_G0030175.1 mouse_genomes_project 5 144333768 144351420 + Fam20c protein_coding processed_transcript MGP_LPJ_T0075205.1 MGP_LPJ_G0030175.1 mouse_genomes_project 5 144351270 144354861 + Fam20c protein_coding retained_intron MGP_LPJ_T0010752.1 MGP_LPJ_G0008870.1 mouse_genomes_project 5 143496174 143496256 - Mir106b miRNA miRNA MGP_LPJ_T0073624.1 MGP_LPJ_G0029892.1 mouse_genomes_project 5 121604936 121639583 + MGP_LPJ_P0073624 Fbxo21 protein_coding protein_coding MGP_LPJ_T0073625.1 MGP_LPJ_G0029892.1 mouse_genomes_project 5 121604980 121615775 + Fbxo21 protein_coding retained_intron MGP_LPJ_T0073626.1 MGP_LPJ_G0029892.1 mouse_genomes_project 5 121604990 121639583 + MGP_LPJ_P0073626 Fbxo21 protein_coding protein_coding MGP_LPJ_T0073627.1 MGP_LPJ_G0029892.1 mouse_genomes_project 5 121605034 121639583 + MGP_LPJ_P0073627 Fbxo21 protein_coding protein_coding MGP_LPJ_T0073628.1 MGP_LPJ_G0029892.1 mouse_genomes_project 5 121605520 121614428 + Fbxo21 protein_coding processed_transcript MGP_LPJ_T0073629.1 MGP_LPJ_G0029892.1 mouse_genomes_project 5 121607523 121614314 + Fbxo21 protein_coding processed_transcript MGP_LPJ_T0008421.1 MGP_LPJ_G0006830.1 mouse_genomes_project 5 138360731 138417761 - Gm42624 lincRNA lincRNA MGP_LPJ_T0073294.1 MGP_LPJ_G0029832.1 mouse_genomes_project 5 117345631 117368565 + Usp30 protein_coding processed_transcript MGP_LPJ_T0073295.1 MGP_LPJ_G0029832.1 mouse_genomes_project 5 117345684 117386283 + MGP_LPJ_P0073295 Usp30 protein_coding protein_coding MGP_LPJ_T0073296.1 MGP_LPJ_G0029832.1 mouse_genomes_project 5 117345920 117366078 + Usp30 protein_coding processed_transcript MGP_LPJ_T0073297.1 MGP_LPJ_G0029832.1 mouse_genomes_project 5 117380782 117407093 + MGP_LPJ_P0073297 Usp30 protein_coding protein_coding MGP_LPJ_T0073298.1 MGP_LPJ_G0029832.1 mouse_genomes_project 5 117380827 117403469 + MGP_LPJ_P0073298 Usp30 protein_coding protein_coding MGP_LPJ_T0073299.1 MGP_LPJ_G0029832.1 mouse_genomes_project 5 117384179 117392752 + Usp30 protein_coding retained_intron MGP_LPJ_T0073300.1 MGP_LPJ_G0029832.1 mouse_genomes_project 5 117391561 117392081 + Usp30 protein_coding retained_intron MGP_LPJ_T0102190.1 MGP_LPJ_G0040227.1 mouse_genomes_project 5 112202631 112208401 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0004783.1 MGP_LPJ_G0004129.1 mouse_genomes_project 5 105723679 105744354 - Gm42620 antisense antisense MGP_LPJ_T0001517.1 MGP_LPJ_G0001433.1 mouse_genomes_project 5 29291344 29293409 - TEC TEC MGP_LPJ_T0074803.1 MGP_LPJ_G0030099.1 mouse_genomes_project 5 141014122 141023809 + MGP_LPJ_P0074803 Zp3 protein_coding protein_coding MGP_LPJ_T0074804.1 MGP_LPJ_G0030099.1 mouse_genomes_project 5 141014191 141022477 + MGP_LPJ_P0074804 Zp3 protein_coding nonsense_mediated_decay MGP_LPJ_T0100857.1 MGP_LPJ_G0039120.1 mouse_genomes_project 5 113339465 113339617 + Gm26277 snoRNA snoRNA MGP_LPJ_T0001482.1 MGP_LPJ_G0001399.1 mouse_genomes_project 5 11114058 11118094 + TEC TEC MGP_LPJ_T0072181.1 MGP_LPJ_G0029574.1 mouse_genomes_project 5 87957672 88003523 - MGP_LPJ_P0072181 Tmprss11e protein_coding protein_coding MGP_LPJ_T0073572.1 MGP_LPJ_G0029883.1 mouse_genomes_project 5 119955942 119972352 - protein_coding retained_intron MGP_LPJ_T0073573.1 MGP_LPJ_G0029883.1 mouse_genomes_project 5 119955943 120116717 - MGP_LPJ_P0073573 protein_coding protein_coding MGP_LPJ_T0073574.1 MGP_LPJ_G0029883.1 mouse_genomes_project 5 119959111 119963531 - MGP_LPJ_P0073574 protein_coding protein_coding MGP_LPJ_T0073575.1 MGP_LPJ_G0029883.1 mouse_genomes_project 5 119994988 119995767 - protein_coding retained_intron MGP_LPJ_T0073133.1 MGP_LPJ_G0029798.1 mouse_genomes_project 5 113910926 114367214 + MGP_LPJ_P0073133 Ttc28 protein_coding protein_coding MGP_LPJ_T0073134.1 MGP_LPJ_G0029798.1 mouse_genomes_project 5 113910926 114367213 + MGP_LPJ_P0073134 Ttc28 protein_coding protein_coding MGP_LPJ_T0073135.1 MGP_LPJ_G0029798.1 mouse_genomes_project 5 113910945 113946835 + Ttc28 protein_coding processed_transcript MGP_LPJ_T0073136.1 MGP_LPJ_G0029798.1 mouse_genomes_project 5 114268170 114272156 + Ttc28 protein_coding retained_intron MGP_LPJ_T0073137.1 MGP_LPJ_G0029798.1 mouse_genomes_project 5 114279145 114316543 + Ttc28 protein_coding processed_transcript MGP_LPJ_T0073138.1 MGP_LPJ_G0029798.1 mouse_genomes_project 5 114313393 114344073 + Ttc28 protein_coding retained_intron MGP_LPJ_T0001914.1 MGP_LPJ_G0001824.1 mouse_genomes_project 5 142541671 142542726 + TEC TEC MGP_LPJ_T0072976.1 MGP_LPJ_G0029763.1 mouse_genomes_project 5 111381516 111387195 - MGP_LPJ_P0072976 Slc26a1 protein_coding protein_coding MGP_LPJ_T0072977.1 MGP_LPJ_G0029763.1 mouse_genomes_project 5 111382174 111386379 - MGP_LPJ_P0072977 Slc26a1 protein_coding protein_coding MGP_LPJ_T0072978.1 MGP_LPJ_G0029763.1 mouse_genomes_project 5 111382191 111386379 - MGP_LPJ_P0072978 Slc26a1 protein_coding protein_coding MGP_LPJ_T0072979.1 MGP_LPJ_G0029763.1 mouse_genomes_project 5 111383724 111386411 - MGP_LPJ_P0072979 Slc26a1 protein_coding protein_coding MGP_LPJ_T0011623.1 MGP_LPJ_G0009741.1 mouse_genomes_project 5 115368200 115368335 - Gm27357 misc_RNA misc_RNA MGP_LPJ_T0071702.1 MGP_LPJ_G0029489.1 mouse_genomes_project 5 66518543 66533573 - Apbb2 protein_coding retained_intron MGP_LPJ_T0071703.1 MGP_LPJ_G0029489.1 mouse_genomes_project 5 66518565 66852052 - MGP_LPJ_P0071703 Apbb2 protein_coding protein_coding MGP_LPJ_T0071704.1 MGP_LPJ_G0029489.1 mouse_genomes_project 5 66518568 66852078 - MGP_LPJ_P0071704 Apbb2 protein_coding protein_coding MGP_LPJ_T0071705.1 MGP_LPJ_G0029489.1 mouse_genomes_project 5 66518568 66851975 - MGP_LPJ_P0071705 Apbb2 protein_coding protein_coding MGP_LPJ_T0071706.1 MGP_LPJ_G0029489.1 mouse_genomes_project 5 66518680 66851957 - MGP_LPJ_P0071706 Apbb2 protein_coding protein_coding MGP_LPJ_T0071707.1 MGP_LPJ_G0029489.1 mouse_genomes_project 5 66520493 66721025 - Apbb2 protein_coding retained_intron MGP_LPJ_T0071708.1 MGP_LPJ_G0029489.1 mouse_genomes_project 5 66521704 66558409 - Apbb2 protein_coding processed_transcript MGP_LPJ_T0071709.1 MGP_LPJ_G0029489.1 mouse_genomes_project 5 66521721 66851965 - MGP_LPJ_P0071709 Apbb2 protein_coding protein_coding MGP_LPJ_T0071710.1 MGP_LPJ_G0029489.1 mouse_genomes_project 5 66521721 66851965 - MGP_LPJ_P0071710 Apbb2 protein_coding protein_coding MGP_LPJ_T0071711.1 MGP_LPJ_G0029489.1 mouse_genomes_project 5 66522038 66721024 - MGP_LPJ_P0071711 Apbb2 protein_coding nonsense_mediated_decay MGP_LPJ_T0071712.1 MGP_LPJ_G0029489.1 mouse_genomes_project 5 66527416 66558210 - Apbb2 protein_coding processed_transcript MGP_LPJ_T0071713.1 MGP_LPJ_G0029489.1 mouse_genomes_project 5 66621648 66851977 - Apbb2 protein_coding retained_intron MGP_LPJ_T0071714.1 MGP_LPJ_G0029489.1 mouse_genomes_project 5 66621648 66851964 - Apbb2 protein_coding retained_intron MGP_LPJ_T0071715.1 MGP_LPJ_G0029489.1 mouse_genomes_project 5 66680160 66851934 - MGP_LPJ_P0071715 Apbb2 protein_coding protein_coding MGP_LPJ_T0071716.1 MGP_LPJ_G0029489.1 mouse_genomes_project 5 66680173 66745696 - MGP_LPJ_P0071716 Apbb2 protein_coding protein_coding MGP_LPJ_T0071717.1 MGP_LPJ_G0029489.1 mouse_genomes_project 5 66680202 66851965 - MGP_LPJ_P0071717 Apbb2 protein_coding protein_coding MGP_LPJ_T0071718.1 MGP_LPJ_G0029489.1 mouse_genomes_project 5 66680406 66852068 - MGP_LPJ_P0071718 Apbb2 protein_coding protein_coding MGP_LPJ_T0071719.1 MGP_LPJ_G0029489.1 mouse_genomes_project 5 66680439 66745703 - MGP_LPJ_P0071719 Apbb2 protein_coding protein_coding MGP_LPJ_T0071720.1 MGP_LPJ_G0029489.1 mouse_genomes_project 5 66680445 66779459 - MGP_LPJ_P0071720 Apbb2 protein_coding protein_coding MGP_LPJ_T0071721.1 MGP_LPJ_G0029489.1 mouse_genomes_project 5 66689881 66851966 - Apbb2 protein_coding retained_intron MGP_LPJ_T0071722.1 MGP_LPJ_G0029489.1 mouse_genomes_project 5 66773203 66851982 - Apbb2 protein_coding retained_intron MGP_LPJ_T0075665.1 MGP_LPJ_G0030278.1 mouse_genomes_project 5 152423017 152425094 - MGP_LPJ_P0075665 protein_coding protein_coding MGP_LPJ_T0015088.1 MGP_LPJ_G0013179.1 mouse_genomes_project 5 118449952 118451946 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008141.1 MGP_LPJ_G0006635.1 mouse_genomes_project 5 44356801 44418448 - Gm43303 lincRNA lincRNA MGP_LPJ_T0014811.1 MGP_LPJ_G0012902.1 mouse_genomes_project 5 7963148 7963617 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015165.1 MGP_LPJ_G0013256.1 mouse_genomes_project 5 154256207 154256682 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008280.1 MGP_LPJ_G0006746.1 mouse_genomes_project 5 111059539 111061592 + Gm10419 lincRNA lincRNA MGP_LPJ_T0008281.1 MGP_LPJ_G0006746.1 mouse_genomes_project 5 111059687 111064692 + Gm10419 lincRNA lincRNA MGP_LPJ_T0008282.1 MGP_LPJ_G0006746.1 mouse_genomes_project 5 111060132 111067749 + Gm10419 lincRNA lincRNA MGP_LPJ_T0008283.1 MGP_LPJ_G0006746.1 mouse_genomes_project 5 111061770 111070106 + Gm10419 lincRNA lincRNA MGP_LPJ_T0008284.1 MGP_LPJ_G0006746.1 mouse_genomes_project 5 111062746 111064693 + Gm10419 lincRNA lincRNA MGP_LPJ_T0073479.1 MGP_LPJ_G0029869.1 mouse_genomes_project 5 118770896 118774198 - MGP_LPJ_P0073479 Cox6a1 protein_coding protein_coding MGP_LPJ_T0073480.1 MGP_LPJ_G0029869.1 mouse_genomes_project 5 118770911 118774131 - Cox6a1 protein_coding retained_intron MGP_LPJ_T0004734.1 MGP_LPJ_G0004097.1 mouse_genomes_project 5 68130671 68193257 + Gm15477 antisense antisense MGP_LPJ_T0004735.1 MGP_LPJ_G0004097.1 mouse_genomes_project 5 68130741 68188721 + Gm15477 antisense antisense MGP_LPJ_T0070959.1 MGP_LPJ_G0029365.1 mouse_genomes_project 5 33153086 33171692 - MGP_LPJ_P0070959 Tnip2 protein_coding protein_coding MGP_LPJ_T0070960.1 MGP_LPJ_G0029365.1 mouse_genomes_project 5 33153086 33171664 - MGP_LPJ_P0070960 Tnip2 protein_coding protein_coding MGP_LPJ_T0070961.1 MGP_LPJ_G0029365.1 mouse_genomes_project 5 33153129 33171639 - MGP_LPJ_P0070961 Tnip2 protein_coding protein_coding MGP_LPJ_T0070962.1 MGP_LPJ_G0029365.1 mouse_genomes_project 5 33156604 33158618 - Tnip2 protein_coding retained_intron MGP_LPJ_T0070963.1 MGP_LPJ_G0029365.1 mouse_genomes_project 5 33158171 33171550 - Tnip2 protein_coding retained_intron MGP_LPJ_T0070964.1 MGP_LPJ_G0029365.1 mouse_genomes_project 5 33160285 33171361 - Tnip2 protein_coding retained_intron MGP_LPJ_T0015047.1 MGP_LPJ_G0013138.1 mouse_genomes_project 5 107031061 107100355 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015140.1 MGP_LPJ_G0013231.1 mouse_genomes_project 5 149386171 149386709 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004865.1 MGP_LPJ_G0004187.1 mouse_genomes_project 5 131719183 131740983 - Tmem132cos antisense antisense MGP_LPJ_T0004866.1 MGP_LPJ_G0004187.1 mouse_genomes_project 5 131719199 131740943 - Tmem132cos antisense antisense MGP_LPJ_T0004867.1 MGP_LPJ_G0004187.1 mouse_genomes_project 5 131719261 131740946 - Tmem132cos antisense antisense MGP_LPJ_T0010726.1 MGP_LPJ_G0008844.1 mouse_genomes_project 5 117710866 117710938 + Mir7027 miRNA miRNA MGP_LPJ_T0011616.1 MGP_LPJ_G0009734.1 mouse_genomes_project 5 105817796 105818089 + Gm23085 misc_RNA misc_RNA MGP_LPJ_T0073095.1 MGP_LPJ_G0029793.1 mouse_genomes_project 5 113694771 113803691 - MGP_LPJ_P0073095 Ep400 protein_coding protein_coding MGP_LPJ_T0073096.1 MGP_LPJ_G0029793.1 mouse_genomes_project 5 113694771 113803881 - MGP_LPJ_P0073096 Ep400 protein_coding protein_coding MGP_LPJ_T0073097.1 MGP_LPJ_G0029793.1 mouse_genomes_project 5 113694776 113803881 - MGP_LPJ_P0073097 Ep400 protein_coding protein_coding MGP_LPJ_T0073098.1 MGP_LPJ_G0029793.1 mouse_genomes_project 5 113697768 113698587 - Ep400 protein_coding processed_transcript MGP_LPJ_T0073099.1 MGP_LPJ_G0029793.1 mouse_genomes_project 5 113697932 113699207 - Ep400 protein_coding retained_intron MGP_LPJ_T0073100.1 MGP_LPJ_G0029793.1 mouse_genomes_project 5 113718514 113722840 - Ep400 protein_coding retained_intron MGP_LPJ_T0073101.1 MGP_LPJ_G0029793.1 mouse_genomes_project 5 113726627 113729789 - Ep400 protein_coding retained_intron MGP_LPJ_T0073102.1 MGP_LPJ_G0029793.1 mouse_genomes_project 5 113728006 113738598 - MGP_LPJ_P0073102 Ep400 protein_coding protein_coding MGP_LPJ_T0073103.1 MGP_LPJ_G0029793.1 mouse_genomes_project 5 113768659 113803749 - MGP_LPJ_P0073103 Ep400 protein_coding protein_coding MGP_LPJ_T0073104.1 MGP_LPJ_G0029793.1 mouse_genomes_project 5 113769053 113803319 - MGP_LPJ_P0073104 Ep400 protein_coding protein_coding MGP_LPJ_T0073105.1 MGP_LPJ_G0029793.1 mouse_genomes_project 5 113789669 113803881 - Ep400 protein_coding processed_transcript MGP_LPJ_T0001664.1 MGP_LPJ_G0001577.1 mouse_genomes_project 5 65782929 65785752 + TEC TEC MGP_LPJ_T0014953.1 MGP_LPJ_G0013044.1 mouse_genomes_project 5 61659761 61660398 - processed_pseudogene processed_pseudogene MGP_LPJ_T0075150.1 MGP_LPJ_G0030165.1 mouse_genomes_project 5 143607825 143637566 + MGP_LPJ_P0075150 Nxpe5 protein_coding protein_coding MGP_LPJ_T0075151.1 MGP_LPJ_G0030165.1 mouse_genomes_project 5 143607825 143637565 + MGP_LPJ_P0075151 Nxpe5 protein_coding protein_coding MGP_LPJ_T0075152.1 MGP_LPJ_G0030165.1 mouse_genomes_project 5 143608112 143641152 + MGP_LPJ_P0075152 Nxpe5 protein_coding protein_coding MGP_LPJ_T0075153.1 MGP_LPJ_G0030165.1 mouse_genomes_project 5 143608112 143638209 + MGP_LPJ_P0075153 Nxpe5 protein_coding protein_coding MGP_LPJ_T0008206.1 MGP_LPJ_G0006687.1 mouse_genomes_project 5 85588927 85592737 + Gm43532 lincRNA lincRNA MGP_LPJ_T0073661.1 MGP_LPJ_G0029900.1 mouse_genomes_project 5 123617892 123625958 + MGP_LPJ_P0073661 Tbx5 protein_coding protein_coding MGP_LPJ_T0073662.1 MGP_LPJ_G0029900.1 mouse_genomes_project 5 123619861 123671204 + MGP_LPJ_P0073662 Tbx5 protein_coding protein_coding MGP_LPJ_T0073663.1 MGP_LPJ_G0029900.1 mouse_genomes_project 5 123621231 123630183 + MGP_LPJ_P0073663 Tbx5 protein_coding protein_coding MGP_LPJ_T0075662.1 MGP_LPJ_G0030277.1 mouse_genomes_project 5 152129225 152222861 - MGP_LPJ_P0075662 protein_coding protein_coding MGP_LPJ_T0075663.1 MGP_LPJ_G0030277.1 mouse_genomes_project 5 152129595 152222842 - MGP_LPJ_P0075663 protein_coding protein_coding MGP_LPJ_T0075664.1 MGP_LPJ_G0030277.1 mouse_genomes_project 5 152135831 152204715 - protein_coding processed_transcript MGP_LPJ_T0100828.1 MGP_LPJ_G0039091.1 mouse_genomes_project 5 56370959 56371089 + Gm23896 snoRNA snoRNA MGP_LPJ_T0014932.1 MGP_LPJ_G0013023.1 mouse_genomes_project 5 55189027 55189733 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004819.1 MGP_LPJ_G0004156.1 mouse_genomes_project 5 119751702 119752673 + Gm13837 antisense antisense MGP_LPJ_T0001563.1 MGP_LPJ_G0001477.1 mouse_genomes_project 5 43466776 43467119 + TEC TEC MGP_LPJ_T0015116.1 MGP_LPJ_G0013207.1 mouse_genomes_project 5 141264776 141265621 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010707.1 MGP_LPJ_G0008825.1 mouse_genomes_project 5 69651798 69651904 + Gm24368 miRNA miRNA MGP_LPJ_T0075617.1 MGP_LPJ_G0030264.1 mouse_genomes_project 5 151149874 151157591 + MGP_LPJ_P0075617 Bud31 protein_coding protein_coding MGP_LPJ_T0075618.1 MGP_LPJ_G0030264.1 mouse_genomes_project 5 151149908 151151174 + Bud31 protein_coding retained_intron MGP_LPJ_T0075619.1 MGP_LPJ_G0030264.1 mouse_genomes_project 5 151149909 151157587 + MGP_LPJ_P0075619 Bud31 protein_coding protein_coding MGP_LPJ_T0075620.1 MGP_LPJ_G0030264.1 mouse_genomes_project 5 151149920 151157587 + MGP_LPJ_P0075620 Bud31 protein_coding protein_coding MGP_LPJ_T0075621.1 MGP_LPJ_G0030264.1 mouse_genomes_project 5 151149927 151157584 + MGP_LPJ_P0075621 Bud31 protein_coding protein_coding MGP_LPJ_T0075622.1 MGP_LPJ_G0030264.1 mouse_genomes_project 5 151151659 151154461 + Bud31 protein_coding retained_intron MGP_LPJ_T0075623.1 MGP_LPJ_G0030264.1 mouse_genomes_project 5 151154317 151157496 + Bud31 protein_coding retained_intron MGP_LPJ_T0074728.1 MGP_LPJ_G0030084.1 mouse_genomes_project 5 140347553 140354386 + MGP_LPJ_P0074728 Nsun5 protein_coding protein_coding MGP_LPJ_T0074729.1 MGP_LPJ_G0030084.1 mouse_genomes_project 5 140347570 140349004 + Nsun5 protein_coding processed_transcript MGP_LPJ_T0074730.1 MGP_LPJ_G0030084.1 mouse_genomes_project 5 140347575 140351792 + MGP_LPJ_P0074730 Nsun5 protein_coding nonsense_mediated_decay MGP_LPJ_T0074731.1 MGP_LPJ_G0030084.1 mouse_genomes_project 5 140347591 140351653 + MGP_LPJ_P0074731 Nsun5 protein_coding nonsense_mediated_decay MGP_LPJ_T0074732.1 MGP_LPJ_G0030084.1 mouse_genomes_project 5 140348177 140350142 + Nsun5 protein_coding retained_intron MGP_LPJ_T0074733.1 MGP_LPJ_G0030084.1 mouse_genomes_project 5 140348527 140351672 + Nsun5 protein_coding retained_intron MGP_LPJ_T0074734.1 MGP_LPJ_G0030084.1 mouse_genomes_project 5 140348659 140349409 + Nsun5 protein_coding retained_intron MGP_LPJ_T0074735.1 MGP_LPJ_G0030084.1 mouse_genomes_project 5 140351229 140354393 + Nsun5 protein_coding retained_intron MGP_LPJ_T0074736.1 MGP_LPJ_G0030084.1 mouse_genomes_project 5 140351766 140353731 + Nsun5 protein_coding retained_intron MGP_LPJ_T0098278.1 MGP_LPJ_G0036559.1 mouse_genomes_project 5 123850912 123851021 + n-R5s176 rRNA rRNA MGP_LPJ_T0099555.1 MGP_LPJ_G0037818.1 mouse_genomes_project 5 18180088 18180188 + Gm22755 snRNA snRNA MGP_LPJ_T0001503.1 MGP_LPJ_G0001420.1 mouse_genomes_project 5 21425820 21426605 + TEC TEC MGP_LPJ_T0072415.1 MGP_LPJ_G0029646.1 mouse_genomes_project 5 93767823 93801528 - MGP_LPJ_P0072415 Ppef2 protein_coding protein_coding MGP_LPJ_T0072416.1 MGP_LPJ_G0029646.1 mouse_genomes_project 5 93767833 93771316 - Ppef2 protein_coding processed_transcript MGP_LPJ_T0072417.1 MGP_LPJ_G0029646.1 mouse_genomes_project 5 93768118 93798416 - MGP_LPJ_P0072417 Ppef2 protein_coding protein_coding MGP_LPJ_T0004758.1 MGP_LPJ_G0004117.1 mouse_genomes_project 5 98349828 98351183 - Gm33050 antisense antisense MGP_LPJ_T0001915.1 MGP_LPJ_G0001825.1 mouse_genomes_project 5 144167137 144168639 + TEC TEC MGP_LPJ_T0073069.1 MGP_LPJ_G0029788.1 mouse_genomes_project 5 113357535 113370774 + Lrcol1 protein_coding retained_intron MGP_LPJ_T0073070.1 MGP_LPJ_G0029788.1 mouse_genomes_project 5 113357535 113370774 + MGP_LPJ_P0073070 Lrcol1 protein_coding nonsense_mediated_decay MGP_LPJ_T0073071.1 MGP_LPJ_G0029788.1 mouse_genomes_project 5 113357535 113370774 + MGP_LPJ_P0073071 Lrcol1 protein_coding protein_coding MGP_LPJ_T0073072.1 MGP_LPJ_G0029788.1 mouse_genomes_project 5 113368856 113370847 + MGP_LPJ_P0073072 Lrcol1 protein_coding protein_coding MGP_LPJ_T0073073.1 MGP_LPJ_G0029788.1 mouse_genomes_project 5 113368918 113370784 + MGP_LPJ_P0073073 Lrcol1 protein_coding nonsense_mediated_decay MGP_LPJ_T0072170.1 MGP_LPJ_G0029569.1 mouse_genomes_project 5 87543338 87577089 - MGP_LPJ_P0072170 Tmprss11d protein_coding protein_coding MGP_LPJ_T0072171.1 MGP_LPJ_G0029569.1 mouse_genomes_project 5 87543338 87619625 - MGP_LPJ_P0072171 Tmprss11d protein_coding protein_coding MGP_LPJ_T0070863.1 MGP_LPJ_G0029351.1 mouse_genomes_project 5 32271162 32277419 + MGP_LPJ_P0070863 Tacc3 protein_coding protein_coding MGP_LPJ_T0070864.1 MGP_LPJ_G0029351.1 mouse_genomes_project 5 32271218 32287737 + MGP_LPJ_P0070864 Tacc3 protein_coding protein_coding MGP_LPJ_T0070865.1 MGP_LPJ_G0029351.1 mouse_genomes_project 5 32271242 32274685 + Tacc3 protein_coding retained_intron MGP_LPJ_T0070866.1 MGP_LPJ_G0029351.1 mouse_genomes_project 5 32282455 32287891 + MGP_LPJ_P0070866 Tacc3 protein_coding protein_coding MGP_LPJ_T0070867.1 MGP_LPJ_G0029351.1 mouse_genomes_project 5 32282518 32294675 + MGP_LPJ_P0070867 Tacc3 protein_coding protein_coding MGP_LPJ_T0071456.1 MGP_LPJ_G0029445.1 mouse_genomes_project 5 51809287 51909733 - MGP_LPJ_P0071456 Ccdc149 protein_coding unknown_likely_coding MGP_LPJ_T0071457.1 MGP_LPJ_G0029445.1 mouse_genomes_project 5 51809293 51909818 - MGP_LPJ_P0071457 Ccdc149 protein_coding protein_coding MGP_LPJ_T0071458.1 MGP_LPJ_G0029445.1 mouse_genomes_project 5 51809293 51909856 - MGP_LPJ_P0071458 Ccdc149 protein_coding protein_coding MGP_LPJ_T0074521.1 MGP_LPJ_G0030053.1 mouse_genomes_project 5 136198509 137349567 - Auts2 protein_coding processed_transcript MGP_LPJ_T0074522.1 MGP_LPJ_G0030053.1 mouse_genomes_project 5 136198945 137348880 - Auts2 protein_coding processed_transcript MGP_LPJ_T0074523.1 MGP_LPJ_G0030053.1 mouse_genomes_project 5 136198985 136299007 - MGP_LPJ_P0074523 Auts2 protein_coding protein_coding MGP_LPJ_T0074524.1 MGP_LPJ_G0030053.1 mouse_genomes_project 5 136200222 136861736 - Auts2 protein_coding processed_transcript MGP_LPJ_T0074525.1 MGP_LPJ_G0030053.1 mouse_genomes_project 5 136200454 136240305 - MGP_LPJ_P0074525 Auts2 protein_coding protein_coding MGP_LPJ_T0074526.1 MGP_LPJ_G0030053.1 mouse_genomes_project 5 136200558 137348100 - Auts2 protein_coding processed_transcript MGP_LPJ_T0074527.1 MGP_LPJ_G0030053.1 mouse_genomes_project 5 136201471 136223383 - MGP_LPJ_P0074527 Auts2 protein_coding protein_coding MGP_LPJ_T0074528.1 MGP_LPJ_G0030053.1 mouse_genomes_project 5 136206566 136218259 - Auts2 protein_coding processed_transcript MGP_LPJ_T0074529.1 MGP_LPJ_G0030053.1 mouse_genomes_project 5 136232866 136234642 - Auts2 protein_coding retained_intron MGP_LPJ_T0074530.1 MGP_LPJ_G0030053.1 mouse_genomes_project 5 136238607 136301329 - Auts2 protein_coding retained_intron MGP_LPJ_T0074531.1 MGP_LPJ_G0030053.1 mouse_genomes_project 5 136240022 136297756 - Auts2 protein_coding processed_transcript MGP_LPJ_T0074532.1 MGP_LPJ_G0030053.1 mouse_genomes_project 5 136297669 136301364 - Auts2 protein_coding retained_intron MGP_LPJ_T0074533.1 MGP_LPJ_G0030053.1 mouse_genomes_project 5 136547128 137348627 - Auts2 protein_coding retained_intron MGP_LPJ_T0074534.1 MGP_LPJ_G0030053.1 mouse_genomes_project 5 136834687 136838219 - Auts2 protein_coding retained_intron MGP_LPJ_T0074535.1 MGP_LPJ_G0030053.1 mouse_genomes_project 5 136835653 137348250 - Auts2 protein_coding processed_transcript MGP_LPJ_T0074536.1 MGP_LPJ_G0030053.1 mouse_genomes_project 5 136840501 136861808 - MGP_LPJ_P0074536 Auts2 protein_coding protein_coding MGP_LPJ_T0074537.1 MGP_LPJ_G0030053.1 mouse_genomes_project 5 136840582 137250501 - MGP_LPJ_P0074537 Auts2 protein_coding protein_coding MGP_LPJ_T0074538.1 MGP_LPJ_G0030053.1 mouse_genomes_project 5 136861128 137349021 - Auts2 protein_coding retained_intron MGP_LPJ_T0074539.1 MGP_LPJ_G0030053.1 mouse_genomes_project 5 137347743 137348052 - MGP_LPJ_P0074539 Auts2 protein_coding protein_coding MGP_LPJ_T0015096.1 MGP_LPJ_G0013187.1 mouse_genomes_project 5 124484942 124485153 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001612.1 MGP_LPJ_G0001526.1 mouse_genomes_project 5 50213392 50215616 + TEC TEC MGP_LPJ_T0069786.1 MGP_LPJ_G0029164.1 mouse_genomes_project 5 485635 494477 - MGP_LPJ_P0069786 Gatad1 protein_coding protein_coding MGP_LPJ_T0069790.1 MGP_LPJ_G0029164.1 mouse_genomes_project 5 492955 500557 - MGP_LPJ_P0069790 Gatad1 protein_coding protein_coding MGP_LPJ_T0069791.1 MGP_LPJ_G0029164.1 mouse_genomes_project 5 496013 500744 - MGP_LPJ_P0069791 Gatad1 protein_coding protein_coding MGP_LPJ_T0071178.1 MGP_LPJ_G0029399.1 mouse_genomes_project 5 36051752 36083428 + MGP_LPJ_P0071178 Crmp1 protein_coding protein_coding MGP_LPJ_T0071179.1 MGP_LPJ_G0029399.1 mouse_genomes_project 5 36051892 36108546 + MGP_LPJ_P0071179 Crmp1 protein_coding protein_coding MGP_LPJ_T0071180.1 MGP_LPJ_G0029399.1 mouse_genomes_project 5 36052546 36092842 + MGP_LPJ_P0071180 Crmp1 protein_coding protein_coding MGP_LPJ_T0071181.1 MGP_LPJ_G0029399.1 mouse_genomes_project 5 36055576 36108514 + MGP_LPJ_P0071181 Crmp1 protein_coding protein_coding MGP_LPJ_T0071182.1 MGP_LPJ_G0029399.1 mouse_genomes_project 5 36055657 36080181 + Crmp1 protein_coding retained_intron MGP_LPJ_T0071183.1 MGP_LPJ_G0029399.1 mouse_genomes_project 5 36058956 36093581 + MGP_LPJ_P0071183 Crmp1 protein_coding protein_coding MGP_LPJ_T0071184.1 MGP_LPJ_G0029399.1 mouse_genomes_project 5 36083383 36091393 + Crmp1 protein_coding retained_intron MGP_LPJ_T0071185.1 MGP_LPJ_G0029399.1 mouse_genomes_project 5 36094456 36097876 + Crmp1 protein_coding retained_intron MGP_LPJ_T0071186.1 MGP_LPJ_G0029399.1 mouse_genomes_project 5 36095116 36097384 + Crmp1 protein_coding retained_intron MGP_LPJ_T0071187.1 MGP_LPJ_G0029399.1 mouse_genomes_project 5 36098577 36103075 + Crmp1 protein_coding retained_intron MGP_LPJ_T0098268.1 MGP_LPJ_G0036549.1 mouse_genomes_project 5 52635784 52635863 + n-R5s171 rRNA rRNA MGP_LPJ_T0001869.1 MGP_LPJ_G0001780.1 mouse_genomes_project 5 134577285 134579146 + TEC TEC MGP_LPJ_T0102187.1 MGP_LPJ_G0040224.1 mouse_genomes_project 5 89597014 89602384 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0015018.1 MGP_LPJ_G0013109.1 mouse_genomes_project 5 90916416 90917242 - processed_pseudogene processed_pseudogene MGP_LPJ_T0070625.1 MGP_LPJ_G0029315.1 mouse_genomes_project 5 29631001 29636651 - MGP_LPJ_P0070625 Eif2b4 protein_coding protein_coding MGP_LPJ_T0070626.1 MGP_LPJ_G0029315.1 mouse_genomes_project 5 29631002 29636360 - MGP_LPJ_P0070626 Eif2b4 protein_coding protein_coding MGP_LPJ_T0070627.1 MGP_LPJ_G0029315.1 mouse_genomes_project 5 29631010 29636229 - MGP_LPJ_P0070627 Eif2b4 protein_coding protein_coding MGP_LPJ_T0070628.1 MGP_LPJ_G0029315.1 mouse_genomes_project 5 29631011 29636235 - MGP_LPJ_P0070628 Eif2b4 protein_coding protein_coding MGP_LPJ_T0070629.1 MGP_LPJ_G0029315.1 mouse_genomes_project 5 29631012 29634861 - MGP_LPJ_P0070629 Eif2b4 protein_coding protein_coding MGP_LPJ_T0070630.1 MGP_LPJ_G0029315.1 mouse_genomes_project 5 29632637 29634075 - Eif2b4 protein_coding retained_intron MGP_LPJ_T0070631.1 MGP_LPJ_G0029315.1 mouse_genomes_project 5 29632782 29633130 - MGP_LPJ_P0070631 Eif2b4 protein_coding protein_coding MGP_LPJ_T0070632.1 MGP_LPJ_G0029315.1 mouse_genomes_project 5 29632802 29634365 - MGP_LPJ_P0070632 Eif2b4 protein_coding protein_coding MGP_LPJ_T0070633.1 MGP_LPJ_G0029315.1 mouse_genomes_project 5 29633611 29634413 - MGP_LPJ_P0070633 Eif2b4 protein_coding protein_coding MGP_LPJ_T0070634.1 MGP_LPJ_G0029315.1 mouse_genomes_project 5 29634413 29636360 - Eif2b4 protein_coding processed_transcript MGP_LPJ_T0070635.1 MGP_LPJ_G0029315.1 mouse_genomes_project 5 29634543 29636220 - Eif2b4 protein_coding retained_intron MGP_LPJ_T0070636.1 MGP_LPJ_G0029315.1 mouse_genomes_project 5 29634931 29636639 - MGP_LPJ_P0070636 Eif2b4 protein_coding protein_coding MGP_LPJ_T0014968.1 MGP_LPJ_G0013059.1 mouse_genomes_project 5 67723582 67723874 + processed_pseudogene processed_pseudogene MGP_LPJ_T0070329.1 MGP_LPJ_G0029258.1 mouse_genomes_project 5 23411523 23415534 + Galnt11 protein_coding processed_transcript MGP_LPJ_T0070331.1 MGP_LPJ_G0029258.1 mouse_genomes_project 5 23412498 23445814 + MGP_LPJ_P0070331 Galnt11 protein_coding protein_coding MGP_LPJ_T0070332.1 MGP_LPJ_G0029258.1 mouse_genomes_project 5 23426401 23445813 + MGP_LPJ_P0070332 Galnt11 protein_coding protein_coding MGP_LPJ_T0070333.1 MGP_LPJ_G0029258.1 mouse_genomes_project 5 23426811 23428810 + MGP_LPJ_P0070333 Galnt11 protein_coding protein_coding MGP_LPJ_T0070334.1 MGP_LPJ_G0029258.1 mouse_genomes_project 5 23427391 23445814 + MGP_LPJ_P0070334 Galnt11 protein_coding protein_coding MGP_LPJ_T0075461.1 MGP_LPJ_G0030231.1 mouse_genomes_project 5 149228799 149242652 - E130309D02Rik protein_coding processed_transcript MGP_LPJ_T0075462.1 MGP_LPJ_G0030231.1 mouse_genomes_project 5 149228811 149242948 - MGP_LPJ_P0075462 E130309D02Rik protein_coding protein_coding MGP_LPJ_T0075463.1 MGP_LPJ_G0030231.1 mouse_genomes_project 5 149228813 149242719 - E130309D02Rik protein_coding retained_intron MGP_LPJ_T0075464.1 MGP_LPJ_G0030231.1 mouse_genomes_project 5 149235899 149242928 - E130309D02Rik protein_coding processed_transcript MGP_LPJ_T0071113.1 MGP_LPJ_G0029386.1 mouse_genomes_project 5 34768411 35178875 - MGP_LPJ_P0071113 Sorcs2 protein_coding protein_coding MGP_LPJ_T0071114.1 MGP_LPJ_G0029386.1 mouse_genomes_project 5 34813759 35178858 - Sorcs2 protein_coding retained_intron MGP_LPJ_T0071115.1 MGP_LPJ_G0029386.1 mouse_genomes_project 5 34818048 35026490 - MGP_LPJ_P0071115 Sorcs2 protein_coding protein_coding MGP_LPJ_T0071116.1 MGP_LPJ_G0029386.1 mouse_genomes_project 5 34906372 35178890 - MGP_LPJ_P0071116 Sorcs2 protein_coding protein_coding MGP_LPJ_T0071117.1 MGP_LPJ_G0029386.1 mouse_genomes_project 5 34907402 35145699 - Sorcs2 protein_coding processed_transcript MGP_LPJ_T0071154.1 MGP_LPJ_G0029395.1 mouse_genomes_project 5 35592472 35617607 - MGP_LPJ_P0071154 Man2b2 protein_coding protein_coding MGP_LPJ_T0071155.1 MGP_LPJ_G0029395.1 mouse_genomes_project 5 35595685 35599917 - MGP_LPJ_P0071155 Man2b2 protein_coding protein_coding MGP_LPJ_T0071156.1 MGP_LPJ_G0029395.1 mouse_genomes_project 5 35595691 35604638 - MGP_LPJ_P0071156 Man2b2 protein_coding protein_coding MGP_LPJ_T0075167.1 MGP_LPJ_G0030169.1 mouse_genomes_project 5 143661775 143676785 - MGP_LPJ_P0075167 Gm43720 protein_coding nonsense_mediated_decay MGP_LPJ_T0073822.1 MGP_LPJ_G0029938.1 mouse_genomes_project 5 125731758 125782810 + MGP_LPJ_P0073822 Brap protein_coding nonsense_mediated_decay MGP_LPJ_T0073823.1 MGP_LPJ_G0029938.1 mouse_genomes_project 5 125731785 125735163 + Brap protein_coding retained_intron MGP_LPJ_T0073824.1 MGP_LPJ_G0029938.1 mouse_genomes_project 5 125731951 125782816 + MGP_LPJ_P0073824 Brap protein_coding protein_coding MGP_LPJ_T0073825.1 MGP_LPJ_G0029938.1 mouse_genomes_project 5 125733224 125746745 + MGP_LPJ_P0073825 Brap protein_coding nonsense_mediated_decay MGP_LPJ_T0073826.1 MGP_LPJ_G0029938.1 mouse_genomes_project 5 125733233 125736831 + MGP_LPJ_P0073826 Brap protein_coding protein_coding MGP_LPJ_T0073827.1 MGP_LPJ_G0029938.1 mouse_genomes_project 5 125733263 125734895 + Brap protein_coding retained_intron MGP_LPJ_T0073828.1 MGP_LPJ_G0029938.1 mouse_genomes_project 5 125737719 125782815 + Brap protein_coding processed_transcript MGP_LPJ_T0073829.1 MGP_LPJ_G0029938.1 mouse_genomes_project 5 125778476 125782812 + Brap protein_coding retained_intron MGP_LPJ_T0100820.1 MGP_LPJ_G0039083.1 mouse_genomes_project 5 18033979 18034107 - Gm25761 snoRNA snoRNA MGP_LPJ_T0075088.1 MGP_LPJ_G0030151.1 mouse_genomes_project 5 143162213 143163317 - protein_coding retained_intron MGP_LPJ_T0075090.1 MGP_LPJ_G0030151.1 mouse_genomes_project 5 143162213 143165037 - MGP_LPJ_P0075090 protein_coding nonsense_mediated_decay MGP_LPJ_T0075091.1 MGP_LPJ_G0030151.1 mouse_genomes_project 5 143162213 143171209 - MGP_LPJ_P0075091 protein_coding protein_coding MGP_LPJ_T0075092.1 MGP_LPJ_G0030151.1 mouse_genomes_project 5 143162213 143170440 - MGP_LPJ_P0075092 protein_coding protein_coding MGP_LPJ_T0075093.1 MGP_LPJ_G0030151.1 mouse_genomes_project 5 143162215 143171260 - MGP_LPJ_P0075093 protein_coding protein_coding MGP_LPJ_T0075094.1 MGP_LPJ_G0030151.1 mouse_genomes_project 5 143170431 143171317 - MGP_LPJ_P0075094 protein_coding protein_coding MGP_LPJ_T0072336.1 MGP_LPJ_G0029622.1 mouse_genomes_project 5 91921355 91936472 + MGP_LPJ_P0072336 Alb protein_coding protein_coding MGP_LPJ_T0072337.1 MGP_LPJ_G0029622.1 mouse_genomes_project 5 91922777 91923181 + Alb protein_coding processed_transcript MGP_LPJ_T0072338.1 MGP_LPJ_G0029622.1 mouse_genomes_project 5 91923158 91934531 + Alb protein_coding processed_transcript MGP_LPJ_T0004875.1 MGP_LPJ_G0004195.1 mouse_genomes_project 5 139441435 139447134 + Gm42884 antisense antisense MGP_LPJ_T0001611.1 MGP_LPJ_G0001525.1 mouse_genomes_project 5 49386727 49389294 + TEC TEC MGP_LPJ_T0014863.1 MGP_LPJ_G0012954.1 mouse_genomes_project 5 24191240 24192178 + processed_pseudogene processed_pseudogene MGP_LPJ_T0072780.1 MGP_LPJ_G0029728.1 mouse_genomes_project 5 108392677 108432531 + MGP_LPJ_P0072780 Zfp326 protein_coding protein_coding MGP_LPJ_T0072781.1 MGP_LPJ_G0029728.1 mouse_genomes_project 5 108392680 108433569 + Zfp326 protein_coding retained_intron MGP_LPJ_T0072782.1 MGP_LPJ_G0029728.1 mouse_genomes_project 5 108392680 108404144 + Zfp326 protein_coding retained_intron MGP_LPJ_T0072783.1 MGP_LPJ_G0029728.1 mouse_genomes_project 5 108392680 108433569 + MGP_LPJ_P0072783 Zfp326 protein_coding protein_coding MGP_LPJ_T0072784.1 MGP_LPJ_G0029728.1 mouse_genomes_project 5 108392688 108432928 + MGP_LPJ_P0072784 Zfp326 protein_coding nonsense_mediated_decay MGP_LPJ_T0072785.1 MGP_LPJ_G0029728.1 mouse_genomes_project 5 108393053 108402307 + Zfp326 protein_coding processed_transcript MGP_LPJ_T0072786.1 MGP_LPJ_G0029728.1 mouse_genomes_project 5 108394882 108425325 + Zfp326 protein_coding retained_intron MGP_LPJ_T0072787.1 MGP_LPJ_G0029728.1 mouse_genomes_project 5 108407056 108412618 + Zfp326 protein_coding retained_intron MGP_LPJ_T0072788.1 MGP_LPJ_G0029728.1 mouse_genomes_project 5 108420965 108425738 + Zfp326 protein_coding retained_intron MGP_LPJ_T0001586.1 MGP_LPJ_G0001500.1 mouse_genomes_project 5 47797716 47804800 - TEC TEC MGP_LPJ_T0001703.1 MGP_LPJ_G0001616.1 mouse_genomes_project 5 69572451 69575464 - TEC TEC MGP_LPJ_T0014980.1 MGP_LPJ_G0013071.1 mouse_genomes_project 5 73933061 73933968 - processed_pseudogene processed_pseudogene MGP_LPJ_T0072593.1 MGP_LPJ_G0029684.1 mouse_genomes_project 5 102099429 102127153 + MGP_LPJ_P0072593 Enoph1 protein_coding protein_coding MGP_LPJ_T0072594.1 MGP_LPJ_G0029684.1 mouse_genomes_project 5 102099488 102127153 + MGP_LPJ_P0072594 Enoph1 protein_coding protein_coding MGP_LPJ_T0072595.1 MGP_LPJ_G0029684.1 mouse_genomes_project 5 102099512 102119782 + Enoph1 protein_coding retained_intron MGP_LPJ_T0072596.1 MGP_LPJ_G0029684.1 mouse_genomes_project 5 102120396 102122591 + Enoph1 protein_coding processed_transcript MGP_LPJ_T0071783.1 MGP_LPJ_G0029499.1 mouse_genomes_project 5 68213935 68251081 + MGP_LPJ_P0071783 Gm5108 protein_coding protein_coding MGP_LPJ_T0071784.1 MGP_LPJ_G0029499.1 mouse_genomes_project 5 68214005 68251011 + Gm5108 protein_coding antisense MGP_LPJ_T0071785.1 MGP_LPJ_G0029499.1 mouse_genomes_project 5 68214005 68251016 + Gm5108 protein_coding antisense MGP_LPJ_T0098042.1 MGP_LPJ_G0036323.1 mouse_genomes_project 5 125975528 125975944 - pseudogene pseudogene MGP_LPJ_T0075867.1 MGP_LPJ_G0030314.1 mouse_genomes_project 5 157104459 157116872 - MGP_LPJ_P0075867 Zar1l protein_coding protein_coding MGP_LPJ_T0073440.1 MGP_LPJ_G0029861.1 mouse_genomes_project 5 118576335 118601612 - MGP_LPJ_P0073440 Cabp1 protein_coding protein_coding MGP_LPJ_T0073441.1 MGP_LPJ_G0029861.1 mouse_genomes_project 5 118576335 118593558 - MGP_LPJ_P0073441 Cabp1 protein_coding protein_coding MGP_LPJ_T0073442.1 MGP_LPJ_G0029861.1 mouse_genomes_project 5 118576360 118588759 - Cabp1 protein_coding processed_transcript MGP_LPJ_T0073443.1 MGP_LPJ_G0029861.1 mouse_genomes_project 5 118576592 118593375 - MGP_LPJ_P0073443 Cabp1 protein_coding protein_coding MGP_LPJ_T0073444.1 MGP_LPJ_G0029861.1 mouse_genomes_project 5 118576617 118593312 - MGP_LPJ_P0073444 Cabp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0073445.1 MGP_LPJ_G0029861.1 mouse_genomes_project 5 118580359 118588596 - Cabp1 protein_coding retained_intron MGP_LPJ_T0073446.1 MGP_LPJ_G0029861.1 mouse_genomes_project 5 118587561 118591484 - Cabp1 protein_coding retained_intron MGP_LPJ_T0015039.1 MGP_LPJ_G0013130.1 mouse_genomes_project 5 103661039 103661838 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001650.1 MGP_LPJ_G0001564.1 mouse_genomes_project 5 63659254 63663979 - TEC TEC MGP_LPJ_T0001651.1 MGP_LPJ_G0001564.1 mouse_genomes_project 5 63663034 63663349 - TEC TEC MGP_LPJ_T0001523.1 MGP_LPJ_G0001438.1 mouse_genomes_project 5 30057109 30057741 + TEC TEC MGP_LPJ_T0072255.1 MGP_LPJ_G0029596.1 mouse_genomes_project 5 89309419 89317326 + MGP_LPJ_P0072255 Csn3 protein_coding protein_coding MGP_LPJ_T0072256.1 MGP_LPJ_G0029596.1 mouse_genomes_project 5 89309447 89315296 + MGP_LPJ_P0072256 Csn3 protein_coding protein_coding MGP_LPJ_T0072257.1 MGP_LPJ_G0029596.1 mouse_genomes_project 5 89309452 89313733 + Csn3 protein_coding retained_intron MGP_LPJ_T0072258.1 MGP_LPJ_G0029596.1 mouse_genomes_project 5 89309467 89313733 + Csn3 protein_coding retained_intron MGP_LPJ_T0072259.1 MGP_LPJ_G0029596.1 mouse_genomes_project 5 89309475 89316926 + MGP_LPJ_P0072259 Csn3 protein_coding protein_coding MGP_LPJ_T0072260.1 MGP_LPJ_G0029596.1 mouse_genomes_project 5 89312289 89314419 + Csn3 protein_coding retained_intron MGP_LPJ_T0015167.1 MGP_LPJ_G0013258.1 mouse_genomes_project 5 155055920 155056098 - processed_pseudogene processed_pseudogene MGP_LPJ_T0070335.1 MGP_LPJ_G0029260.1 mouse_genomes_project 5 23451593 23632885 - MGP_LPJ_P0070335 Kmt2c protein_coding unknown_likely_coding MGP_LPJ_T0070336.1 MGP_LPJ_G0029260.1 mouse_genomes_project 5 23451602 23481461 - MGP_LPJ_P0070336 Kmt2c protein_coding protein_coding MGP_LPJ_T0070337.1 MGP_LPJ_G0029260.1 mouse_genomes_project 5 23452230 23490337 - MGP_LPJ_P0070337 Kmt2c protein_coding protein_coding MGP_LPJ_T0070338.1 MGP_LPJ_G0029260.1 mouse_genomes_project 5 23453414 23693141 - MGP_LPJ_P0070338 Kmt2c protein_coding protein_coding MGP_LPJ_T0070339.1 MGP_LPJ_G0029260.1 mouse_genomes_project 5 23455456 23462737 - Kmt2c protein_coding retained_intron MGP_LPJ_T0070340.1 MGP_LPJ_G0029260.1 mouse_genomes_project 5 23470456 23474765 - Kmt2c protein_coding retained_intron MGP_LPJ_T0070341.1 MGP_LPJ_G0029260.1 mouse_genomes_project 5 23497547 23693098 - MGP_LPJ_P0070341 Kmt2c protein_coding protein_coding MGP_LPJ_T0070342.1 MGP_LPJ_G0029260.1 mouse_genomes_project 5 23556438 23693151 - MGP_LPJ_P0070342 Kmt2c protein_coding protein_coding MGP_LPJ_T0070343.1 MGP_LPJ_G0029260.1 mouse_genomes_project 5 23566110 23693179 - Kmt2c protein_coding retained_intron MGP_LPJ_T0074147.1 MGP_LPJ_G0029983.1 mouse_genomes_project 5 128187500 128190785 - MGP_LPJ_P0074147 Hcar1 protein_coding protein_coding MGP_LPJ_T0001865.1 MGP_LPJ_G0001776.1 mouse_genomes_project 5 133280909 133281577 - TEC TEC MGP_LPJ_T0014841.1 MGP_LPJ_G0012932.1 mouse_genomes_project 5 20283037 20283407 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015127.1 MGP_LPJ_G0013218.1 mouse_genomes_project 5 143753800 143754004 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008311.1 MGP_LPJ_G0006761.1 mouse_genomes_project 5 115354281 115355712 + lincRNA lincRNA MGP_LPJ_T0004837.1 MGP_LPJ_G0004166.1 mouse_genomes_project 5 124468391 124469698 - Gm43579 antisense antisense MGP_LPJ_T0004781.1 MGP_LPJ_G0004128.1 mouse_genomes_project 5 104657050 104667827 - 1700013M08Rik antisense antisense MGP_LPJ_T0004782.1 MGP_LPJ_G0004128.1 mouse_genomes_project 5 104663689 104664487 - 1700013M08Rik antisense antisense MGP_LPJ_T0010693.1 MGP_LPJ_G0008811.1 mouse_genomes_project 5 32526107 32526169 - Mir7024 miRNA miRNA MGP_LPJ_T0008425.1 MGP_LPJ_G0006834.1 mouse_genomes_project 5 142055374 142074629 + 4933404O12Rik lincRNA lincRNA MGP_LPJ_T0008426.1 MGP_LPJ_G0006834.1 mouse_genomes_project 5 142055409 142071277 + 4933404O12Rik lincRNA lincRNA MGP_LPJ_T0008427.1 MGP_LPJ_G0006834.1 mouse_genomes_project 5 142055580 142071196 + 4933404O12Rik lincRNA lincRNA MGP_LPJ_T0008428.1 MGP_LPJ_G0006834.1 mouse_genomes_project 5 142055629 142074635 + 4933404O12Rik lincRNA lincRNA MGP_LPJ_T0072348.1 MGP_LPJ_G0029626.1 mouse_genomes_project 5 92058642 92101041 - MGP_LPJ_P0072348 Rassf6 protein_coding protein_coding MGP_LPJ_T0072349.1 MGP_LPJ_G0029626.1 mouse_genomes_project 5 92058642 92101041 - MGP_LPJ_P0072349 Rassf6 protein_coding protein_coding MGP_LPJ_T0072350.1 MGP_LPJ_G0029626.1 mouse_genomes_project 5 92059189 92065396 - MGP_LPJ_P0072350 Rassf6 protein_coding nonsense_mediated_decay MGP_LPJ_T0072351.1 MGP_LPJ_G0029626.1 mouse_genomes_project 5 92059397 92101208 - MGP_LPJ_P0072351 Rassf6 protein_coding protein_coding MGP_LPJ_T0072352.1 MGP_LPJ_G0029626.1 mouse_genomes_project 5 92073240 92101179 - MGP_LPJ_P0072352 Rassf6 protein_coding nonsense_mediated_decay MGP_LPJ_T0072353.1 MGP_LPJ_G0029626.1 mouse_genomes_project 5 92077777 92101078 - MGP_LPJ_P0072353 Rassf6 protein_coding protein_coding MGP_LPJ_T0072354.1 MGP_LPJ_G0029626.1 mouse_genomes_project 5 92099025 92101206 - Rassf6 protein_coding processed_transcript MGP_LPJ_T0070424.1 MGP_LPJ_G0029281.1 mouse_genomes_project 5 28467932 28477944 - MGP_LPJ_P0070424 protein_coding unknown_likely_coding MGP_LPJ_T0070425.1 MGP_LPJ_G0029281.1 mouse_genomes_project 5 28468000 28480949 - protein_coding retained_intron MGP_LPJ_T0070426.1 MGP_LPJ_G0029281.1 mouse_genomes_project 5 28468067 28480904 - MGP_LPJ_P0070426 protein_coding nonsense_mediated_decay MGP_LPJ_T0070427.1 MGP_LPJ_G0029281.1 mouse_genomes_project 5 28468916 28480916 - MGP_LPJ_P0070427 protein_coding protein_coding MGP_LPJ_T0070428.1 MGP_LPJ_G0029281.1 mouse_genomes_project 5 28469951 28480887 - MGP_LPJ_P0070428 protein_coding nonsense_mediated_decay MGP_LPJ_T0070429.1 MGP_LPJ_G0029281.1 mouse_genomes_project 5 28470561 28480921 - protein_coding retained_intron MGP_LPJ_T0070430.1 MGP_LPJ_G0029281.1 mouse_genomes_project 5 28470818 28480911 - MGP_LPJ_P0070430 protein_coding protein_coding MGP_LPJ_T0070431.1 MGP_LPJ_G0029281.1 mouse_genomes_project 5 28474626 28480857 - protein_coding processed_transcript MGP_LPJ_T0070120.1 MGP_LPJ_G0029220.1 mouse_genomes_project 5 19635496 19684421 - MGP_LPJ_P0070120 Napepld protein_coding protein_coding MGP_LPJ_T0070121.1 MGP_LPJ_G0029220.1 mouse_genomes_project 5 19635498 19684423 - MGP_LPJ_P0070121 Napepld protein_coding protein_coding MGP_LPJ_T0070406.1 MGP_LPJ_G0029277.1 mouse_genomes_project 5 27941304 28053455 + MGP_LPJ_P0070406 Ube3c protein_coding protein_coding MGP_LPJ_T0070407.1 MGP_LPJ_G0029277.1 mouse_genomes_project 5 27941508 28004362 + MGP_LPJ_P0070407 Ube3c protein_coding protein_coding MGP_LPJ_T0070408.1 MGP_LPJ_G0029277.1 mouse_genomes_project 5 27941548 27972221 + Ube3c protein_coding retained_intron MGP_LPJ_T0070409.1 MGP_LPJ_G0029277.1 mouse_genomes_project 5 27962560 27972758 + Ube3c protein_coding processed_transcript MGP_LPJ_T0070410.1 MGP_LPJ_G0029277.1 mouse_genomes_project 5 28002790 28004362 + Ube3c protein_coding retained_intron MGP_LPJ_T0008115.1 MGP_LPJ_G0006616.1 mouse_genomes_project 5 36643673 36644446 + Gm43763 lincRNA lincRNA MGP_LPJ_T0014990.1 MGP_LPJ_G0013081.1 mouse_genomes_project 5 77898472 77899045 + processed_pseudogene processed_pseudogene MGP_LPJ_T0072498.1 MGP_LPJ_G0029660.1 mouse_genomes_project 5 94768605 94793197 - MGP_LPJ_P0072498 Ccni protein_coding protein_coding MGP_LPJ_T0072499.1 MGP_LPJ_G0029660.1 mouse_genomes_project 5 94774111 94774879 - Ccni protein_coding retained_intron MGP_LPJ_T0072500.1 MGP_LPJ_G0029660.1 mouse_genomes_project 5 94774420 94790065 - MGP_LPJ_P0072500 Ccni protein_coding protein_coding MGP_LPJ_T0072501.1 MGP_LPJ_G0029660.1 mouse_genomes_project 5 94776222 94793130 - MGP_LPJ_P0072501 Ccni protein_coding protein_coding MGP_LPJ_T0001598.1 MGP_LPJ_G0001512.1 mouse_genomes_project 5 48306557 48307852 - TEC TEC MGP_LPJ_T0014947.1 MGP_LPJ_G0013038.1 mouse_genomes_project 5 60040059 60040693 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014938.1 MGP_LPJ_G0013029.1 mouse_genomes_project 5 57010794 57012238 + processed_pseudogene processed_pseudogene MGP_LPJ_T0075163.1 MGP_LPJ_G0030168.1 mouse_genomes_project 5 143661744 143669667 - MGP_LPJ_P0075163 Gal3st4 protein_coding protein_coding MGP_LPJ_T0075164.1 MGP_LPJ_G0030168.1 mouse_genomes_project 5 143661748 143669581 - MGP_LPJ_P0075164 Gal3st4 protein_coding protein_coding MGP_LPJ_T0075165.1 MGP_LPJ_G0030168.1 mouse_genomes_project 5 143661761 143669628 - Gal3st4 protein_coding processed_transcript MGP_LPJ_T0075166.1 MGP_LPJ_G0030168.1 mouse_genomes_project 5 143661761 143669628 - MGP_LPJ_P0075166 Gal3st4 protein_coding protein_coding MGP_LPJ_T0075168.1 MGP_LPJ_G0030168.1 mouse_genomes_project 5 143667819 143669576 - MGP_LPJ_P0075168 Gal3st4 protein_coding protein_coding MGP_LPJ_T0071699.1 MGP_LPJ_G0029488.1 mouse_genomes_project 5 66477626 66517873 + MGP_LPJ_P0071699 Nsun7 protein_coding protein_coding MGP_LPJ_T0071700.1 MGP_LPJ_G0029488.1 mouse_genomes_project 5 66477626 66516909 + MGP_LPJ_P0071700 Nsun7 protein_coding protein_coding MGP_LPJ_T0071701.1 MGP_LPJ_G0029488.1 mouse_genomes_project 5 66477626 66517862 + MGP_LPJ_P0071701 Nsun7 protein_coding protein_coding MGP_LPJ_T0070422.1 MGP_LPJ_G0029280.1 mouse_genomes_project 5 28417534 28423131 + MGP_LPJ_P0070422 Il6 protein_coding protein_coding MGP_LPJ_T0070423.1 MGP_LPJ_G0029280.1 mouse_genomes_project 5 28417582 28422698 + MGP_LPJ_P0070423 Il6 protein_coding protein_coding MGP_LPJ_T0070821.1 MGP_LPJ_G0029343.1 mouse_genomes_project 5 31828964 31856080 - MGP_LPJ_P0070821 Ctbp1 protein_coding protein_coding MGP_LPJ_T0070822.1 MGP_LPJ_G0029343.1 mouse_genomes_project 5 31828995 31856078 - MGP_LPJ_P0070822 Ctbp1 protein_coding protein_coding MGP_LPJ_T0070823.1 MGP_LPJ_G0029343.1 mouse_genomes_project 5 31829266 31856067 - MGP_LPJ_P0070823 Ctbp1 protein_coding protein_coding MGP_LPJ_T0070824.1 MGP_LPJ_G0029343.1 mouse_genomes_project 5 31829409 31830492 - Ctbp1 protein_coding retained_intron MGP_LPJ_T0070825.1 MGP_LPJ_G0029343.1 mouse_genomes_project 5 31829502 31830795 - Ctbp1 protein_coding retained_intron MGP_LPJ_T0070826.1 MGP_LPJ_G0029343.1 mouse_genomes_project 5 31829741 31856048 - MGP_LPJ_P0070826 Ctbp1 protein_coding protein_coding MGP_LPJ_T0070827.1 MGP_LPJ_G0029343.1 mouse_genomes_project 5 31831624 31850568 - MGP_LPJ_P0070827 Ctbp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0070828.1 MGP_LPJ_G0029343.1 mouse_genomes_project 5 31832099 31856065 - MGP_LPJ_P0070828 Ctbp1 protein_coding protein_coding MGP_LPJ_T0070829.1 MGP_LPJ_G0029343.1 mouse_genomes_project 5 31840566 31850716 - MGP_LPJ_P0070829 Ctbp1 protein_coding protein_coding MGP_LPJ_T0070830.1 MGP_LPJ_G0029343.1 mouse_genomes_project 5 31841908 31850604 - Ctbp1 protein_coding retained_intron MGP_LPJ_T0070831.1 MGP_LPJ_G0029343.1 mouse_genomes_project 5 31842324 31855667 - MGP_LPJ_P0070831 Ctbp1 protein_coding protein_coding MGP_LPJ_T0070832.1 MGP_LPJ_G0029343.1 mouse_genomes_project 5 31848031 31855678 - MGP_LPJ_P0070832 Ctbp1 protein_coding protein_coding MGP_LPJ_T0004915.1 MGP_LPJ_G0004222.1 mouse_genomes_project 5 155413818 155417723 - antisense antisense MGP_LPJ_T0100844.1 MGP_LPJ_G0039107.1 mouse_genomes_project 5 89095799 89095922 + Gm25066 snoRNA snoRNA MGP_LPJ_T0075911.1 MGP_LPJ_G0030321.1 mouse_genomes_project 5 157692812 158054041 - MGP_LPJ_P0075911 Gm42906 protein_coding protein_coding MGP_LPJ_T0004724.1 MGP_LPJ_G0004088.1 mouse_genomes_project 5 65750054 65753764 - Gm42726 antisense antisense MGP_LPJ_T0001830.1 MGP_LPJ_G0001742.1 mouse_genomes_project 5 125640162 125642377 + TEC TEC MGP_LPJ_T0014917.1 MGP_LPJ_G0013008.1 mouse_genomes_project 5 46884259 46885064 + processed_pseudogene processed_pseudogene MGP_LPJ_T0070189.1 MGP_LPJ_G0029231.1 mouse_genomes_project 5 21858901 21861200 + MGP_LPJ_P0070189 Rint1 protein_coding protein_coding MGP_LPJ_T0070190.1 MGP_LPJ_G0029231.1 mouse_genomes_project 5 21858901 21895284 + MGP_LPJ_P0070190 Rint1 protein_coding protein_coding MGP_LPJ_T0070191.1 MGP_LPJ_G0029231.1 mouse_genomes_project 5 21858902 21865037 + MGP_LPJ_P0070191 Rint1 protein_coding protein_coding MGP_LPJ_T0070192.1 MGP_LPJ_G0029231.1 mouse_genomes_project 5 21858905 21895212 + MGP_LPJ_P0070192 Rint1 protein_coding protein_coding MGP_LPJ_T0070193.1 MGP_LPJ_G0029231.1 mouse_genomes_project 5 21858909 21895283 + Rint1 protein_coding retained_intron MGP_LPJ_T0070194.1 MGP_LPJ_G0029231.1 mouse_genomes_project 5 21858911 21861225 + Rint1 protein_coding retained_intron MGP_LPJ_T0070195.1 MGP_LPJ_G0029231.1 mouse_genomes_project 5 21858931 21868358 + Rint1 protein_coding processed_transcript MGP_LPJ_T0070196.1 MGP_LPJ_G0029231.1 mouse_genomes_project 5 21878634 21881958 + Rint1 protein_coding retained_intron MGP_LPJ_T0070197.1 MGP_LPJ_G0029231.1 mouse_genomes_project 5 21883553 21890685 + Rint1 protein_coding processed_transcript MGP_LPJ_T0099568.1 MGP_LPJ_G0037831.1 mouse_genomes_project 5 37420304 37420440 + Gm22249 snRNA snRNA MGP_LPJ_T0072562.1 MGP_LPJ_G0029678.1 mouse_genomes_project 5 100917169 101029253 - MGP_LPJ_P0072562 Prkg2 protein_coding protein_coding MGP_LPJ_T0072563.1 MGP_LPJ_G0029678.1 mouse_genomes_project 5 100918631 100933146 - MGP_LPJ_P0072563 Prkg2 protein_coding protein_coding MGP_LPJ_T0072564.1 MGP_LPJ_G0029678.1 mouse_genomes_project 5 100918631 100933144 - MGP_LPJ_P0072564 Prkg2 protein_coding protein_coding MGP_LPJ_T0072565.1 MGP_LPJ_G0029678.1 mouse_genomes_project 5 100919083 101028937 - MGP_LPJ_P0072565 Prkg2 protein_coding protein_coding MGP_LPJ_T0072566.1 MGP_LPJ_G0029678.1 mouse_genomes_project 5 100936696 100955776 - Prkg2 protein_coding retained_intron MGP_LPJ_T0004826.1 MGP_LPJ_G0004161.1 mouse_genomes_project 5 121701290 121705644 + Gm9754 antisense antisense MGP_LPJ_T0069952.1 MGP_LPJ_G0029189.1 mouse_genomes_project 5 5596157 5724219 - MGP_LPJ_P0069952 Rundc3b protein_coding protein_coding MGP_LPJ_T0069953.1 MGP_LPJ_G0029189.1 mouse_genomes_project 5 5598090 5724219 - MGP_LPJ_P0069953 Rundc3b protein_coding protein_coding MGP_LPJ_T0070839.1 MGP_LPJ_G0029345.1 mouse_genomes_project 5 31967104 31999427 + Uvssa protein_coding retained_intron MGP_LPJ_T0070840.1 MGP_LPJ_G0029345.1 mouse_genomes_project 5 31967118 32003799 + MGP_LPJ_P0070840 Uvssa protein_coding unknown_likely_coding MGP_LPJ_T0070841.1 MGP_LPJ_G0029345.1 mouse_genomes_project 5 31967251 32008657 + MGP_LPJ_P0070841 Uvssa protein_coding nonsense_mediated_decay MGP_LPJ_T0073980.1 MGP_LPJ_G0029960.1 mouse_genomes_project 5 126986670 127020122 - MGP_LPJ_P0073980 Anapc5 protein_coding protein_coding MGP_LPJ_T0073981.1 MGP_LPJ_G0029960.1 mouse_genomes_project 5 126986932 127020070 - MGP_LPJ_P0073981 Anapc5 protein_coding protein_coding MGP_LPJ_T0073982.1 MGP_LPJ_G0029960.1 mouse_genomes_project 5 126986932 127020063 - MGP_LPJ_P0073982 Anapc5 protein_coding nonsense_mediated_decay MGP_LPJ_T0073983.1 MGP_LPJ_G0029960.1 mouse_genomes_project 5 126986932 127020070 - MGP_LPJ_P0073983 Anapc5 protein_coding protein_coding MGP_LPJ_T0073984.1 MGP_LPJ_G0029960.1 mouse_genomes_project 5 126986934 127020063 - MGP_LPJ_P0073984 Anapc5 protein_coding protein_coding MGP_LPJ_T0073985.1 MGP_LPJ_G0029960.1 mouse_genomes_project 5 126986938 127020063 - MGP_LPJ_P0073985 Anapc5 protein_coding protein_coding MGP_LPJ_T0073986.1 MGP_LPJ_G0029960.1 mouse_genomes_project 5 126986942 127020077 - MGP_LPJ_P0073986 Anapc5 protein_coding protein_coding MGP_LPJ_T0073987.1 MGP_LPJ_G0029960.1 mouse_genomes_project 5 126987126 126992711 - MGP_LPJ_P0073987 Anapc5 protein_coding nonsense_mediated_decay MGP_LPJ_T0073988.1 MGP_LPJ_G0029960.1 mouse_genomes_project 5 126987627 126998733 - Anapc5 protein_coding retained_intron MGP_LPJ_T0073989.1 MGP_LPJ_G0029960.1 mouse_genomes_project 5 126991068 126993671 - MGP_LPJ_P0073989 Anapc5 protein_coding protein_coding MGP_LPJ_T0073990.1 MGP_LPJ_G0029960.1 mouse_genomes_project 5 126992632 127001460 - Anapc5 protein_coding retained_intron MGP_LPJ_T0073991.1 MGP_LPJ_G0029960.1 mouse_genomes_project 5 126998397 127006344 - MGP_LPJ_P0073991 Anapc5 protein_coding nonsense_mediated_decay MGP_LPJ_T0073992.1 MGP_LPJ_G0029960.1 mouse_genomes_project 5 126998472 127017366 - Anapc5 protein_coding processed_transcript MGP_LPJ_T0073993.1 MGP_LPJ_G0029960.1 mouse_genomes_project 5 126999097 127005343 - Anapc5 protein_coding retained_intron MGP_LPJ_T0073994.1 MGP_LPJ_G0029960.1 mouse_genomes_project 5 126999282 127020062 - Anapc5 protein_coding retained_intron MGP_LPJ_T0073995.1 MGP_LPJ_G0029960.1 mouse_genomes_project 5 127004836 127019801 - Anapc5 protein_coding retained_intron MGP_LPJ_T0073996.1 MGP_LPJ_G0029960.1 mouse_genomes_project 5 127006329 127020053 - MGP_LPJ_P0073996 Anapc5 protein_coding nonsense_mediated_decay MGP_LPJ_T0073997.1 MGP_LPJ_G0029960.1 mouse_genomes_project 5 127016639 127020058 - Anapc5 protein_coding processed_transcript MGP_LPJ_T0070351.1 MGP_LPJ_G0029264.1 mouse_genomes_project 5 24304884 24306658 + MGP_LPJ_P0070351 Rrs1 protein_coding protein_coding MGP_LPJ_T0099572.1 MGP_LPJ_G0037835.1 mouse_genomes_project 5 51775468 51775573 - Gm25601 snRNA snRNA MGP_LPJ_T0070129.1 MGP_LPJ_G0029222.1 mouse_genomes_project 5 19741344 19768200 - MGP_LPJ_P0070129 Dnajc2 protein_coding protein_coding MGP_LPJ_T0070130.1 MGP_LPJ_G0029222.1 mouse_genomes_project 5 19741346 19768068 - MGP_LPJ_P0070130 Dnajc2 protein_coding protein_coding MGP_LPJ_T0070131.1 MGP_LPJ_G0029222.1 mouse_genomes_project 5 19741353 19768186 - Dnajc2 protein_coding retained_intron MGP_LPJ_T0070132.1 MGP_LPJ_G0029222.1 mouse_genomes_project 5 19751036 19752946 - Dnajc2 protein_coding retained_intron MGP_LPJ_T0070133.1 MGP_LPJ_G0029222.1 mouse_genomes_project 5 19756753 19768170 - Dnajc2 protein_coding retained_intron MGP_LPJ_T0070134.1 MGP_LPJ_G0029222.1 mouse_genomes_project 5 19757737 19768201 - MGP_LPJ_P0070134 Dnajc2 protein_coding protein_coding MGP_LPJ_T0001510.1 MGP_LPJ_G0001426.1 mouse_genomes_project 5 25493819 25496726 + TEC TEC MGP_LPJ_T0098613.1 MGP_LPJ_G0036887.1 mouse_genomes_project 5 2145194 2152918 - sense_intronic sense_intronic MGP_LPJ_T0075684.1 MGP_LPJ_G0030282.1 mouse_genomes_project 5 152865854 152867861 - Gpr12 protein_coding retained_intron MGP_LPJ_T0075685.1 MGP_LPJ_G0030282.1 mouse_genomes_project 5 152865856 152868696 - MGP_LPJ_P0075685 Gpr12 protein_coding protein_coding MGP_LPJ_T0075686.1 MGP_LPJ_G0030282.1 mouse_genomes_project 5 152866208 152868289 - MGP_LPJ_P0075686 Gpr12 protein_coding protein_coding MGP_LPJ_T0075687.1 MGP_LPJ_G0030282.1 mouse_genomes_project 5 152866927 152868276 - MGP_LPJ_P0075687 Gpr12 protein_coding protein_coding MGP_LPJ_T0075688.1 MGP_LPJ_G0030282.1 mouse_genomes_project 5 152867111 152868300 - MGP_LPJ_P0075688 Gpr12 protein_coding protein_coding MGP_LPJ_T0073309.1 MGP_LPJ_G0029835.1 mouse_genomes_project 5 117428908 117539602 + MGP_LPJ_P0073309 Acacb protein_coding protein_coding MGP_LPJ_T0073310.1 MGP_LPJ_G0029835.1 mouse_genomes_project 5 117447703 117539596 + MGP_LPJ_P0073310 Acacb protein_coding protein_coding MGP_LPJ_T0073311.1 MGP_LPJ_G0029835.1 mouse_genomes_project 5 117447778 117538464 + MGP_LPJ_P0073311 Acacb protein_coding unknown_likely_coding MGP_LPJ_T0073312.1 MGP_LPJ_G0029835.1 mouse_genomes_project 5 117458797 117474733 + MGP_LPJ_P0073312 Acacb protein_coding protein_coding MGP_LPJ_T0073313.1 MGP_LPJ_G0029835.1 mouse_genomes_project 5 117486221 117539600 + Acacb protein_coding retained_intron MGP_LPJ_T0073314.1 MGP_LPJ_G0029835.1 mouse_genomes_project 5 117537176 117537802 + Acacb protein_coding retained_intron MGP_LPJ_T0001514.1 MGP_LPJ_G0001430.1 mouse_genomes_project 5 26930403 26932089 + TEC TEC MGP_LPJ_T0014985.1 MGP_LPJ_G0013076.1 mouse_genomes_project 5 75805658 75805986 + processed_pseudogene processed_pseudogene MGP_LPJ_T0072992.1 MGP_LPJ_G0029768.1 mouse_genomes_project 5 111607323 111617360 - MGP_LPJ_P0072992 protein_coding protein_coding MGP_LPJ_T0001773.1 MGP_LPJ_G0001685.1 mouse_genomes_project 5 109200466 109203152 - TEC TEC MGP_LPJ_T0001595.1 MGP_LPJ_G0001509.1 mouse_genomes_project 5 48266890 48268198 - TEC TEC MGP_LPJ_T0072214.1 MGP_LPJ_G0029590.1 mouse_genomes_project 5 89026234 89034663 + Csn1s1 protein_coding retained_intron MGP_LPJ_T0072215.1 MGP_LPJ_G0029590.1 mouse_genomes_project 5 89026234 89027504 + Csn1s1 protein_coding retained_intron MGP_LPJ_T0072216.1 MGP_LPJ_G0029590.1 mouse_genomes_project 5 89026234 89027562 + Csn1s1 protein_coding retained_intron MGP_LPJ_T0072217.1 MGP_LPJ_G0029590.1 mouse_genomes_project 5 89026253 89034272 + MGP_LPJ_P0072217 Csn1s1 protein_coding protein_coding MGP_LPJ_T0072218.1 MGP_LPJ_G0029590.1 mouse_genomes_project 5 89026254 89044964 + MGP_LPJ_P0072218 Csn1s1 protein_coding protein_coding MGP_LPJ_T0072219.1 MGP_LPJ_G0029590.1 mouse_genomes_project 5 89026259 89044964 + MGP_LPJ_P0072219 Csn1s1 protein_coding protein_coding MGP_LPJ_T0072220.1 MGP_LPJ_G0029590.1 mouse_genomes_project 5 89026873 89035128 + Csn1s1 protein_coding processed_transcript MGP_LPJ_T0072221.1 MGP_LPJ_G0029590.1 mouse_genomes_project 5 89027259 89029801 + Csn1s1 protein_coding retained_intron MGP_LPJ_T0072222.1 MGP_LPJ_G0029590.1 mouse_genomes_project 5 89031561 89032487 + Csn1s1 protein_coding retained_intron MGP_LPJ_T0072223.1 MGP_LPJ_G0029590.1 mouse_genomes_project 5 89041441 89044910 + Csn1s1 protein_coding retained_intron MGP_LPJ_T0072224.1 MGP_LPJ_G0029590.1 mouse_genomes_project 5 89042914 89044444 + Csn1s1 protein_coding retained_intron MGP_LPJ_T0070156.1 MGP_LPJ_G0029226.1 mouse_genomes_project 5 20469616 20527765 - Orc5 protein_coding retained_intron MGP_LPJ_T0070157.1 MGP_LPJ_G0029226.1 mouse_genomes_project 5 20469620 20527836 - MGP_LPJ_P0070157 Orc5 protein_coding protein_coding MGP_LPJ_T0070158.1 MGP_LPJ_G0029226.1 mouse_genomes_project 5 20495422 20499164 - Orc5 protein_coding retained_intron MGP_LPJ_T0070159.1 MGP_LPJ_G0029226.1 mouse_genomes_project 5 20500013 20526980 - MGP_LPJ_P0070159 Orc5 protein_coding protein_coding MGP_LPJ_T0070160.1 MGP_LPJ_G0029226.1 mouse_genomes_project 5 20500048 20527836 - Orc5 protein_coding processed_transcript MGP_LPJ_T0070161.1 MGP_LPJ_G0029226.1 mouse_genomes_project 5 20523859 20527890 - Orc5 protein_coding processed_transcript MGP_LPJ_T0008338.1 MGP_LPJ_G0006777.1 mouse_genomes_project 5 119810512 119817931 + B230112J18Rik lincRNA lincRNA MGP_LPJ_T0075266.1 MGP_LPJ_G0030185.1 mouse_genomes_project 5 144945417 145052174 - MGP_LPJ_P0075266 3110082I17Rik protein_coding protein_coding MGP_LPJ_T0075267.1 MGP_LPJ_G0030185.1 mouse_genomes_project 5 144945417 145052199 - MGP_LPJ_P0075267 3110082I17Rik protein_coding protein_coding MGP_LPJ_T0075268.1 MGP_LPJ_G0030185.1 mouse_genomes_project 5 144949289 145052183 - 3110082I17Rik protein_coding retained_intron MGP_LPJ_T0075278.1 MGP_LPJ_G0030185.1 mouse_genomes_project 5 145004443 145047205 - 3110082I17Rik protein_coding processed_transcript MGP_LPJ_T0072670.1 MGP_LPJ_G0029697.1 mouse_genomes_project 5 103927666 103991794 + MGP_LPJ_P0072670 Cds1 protein_coding protein_coding MGP_LPJ_T0072671.1 MGP_LPJ_G0029697.1 mouse_genomes_project 5 103974481 103989383 + Cds1 protein_coding retained_intron MGP_LPJ_T0073998.1 MGP_LPJ_G0029961.1 mouse_genomes_project 5 127054540 127079780 + MGP_LPJ_P0073998 Rnf34 protein_coding protein_coding MGP_LPJ_T0073999.1 MGP_LPJ_G0029961.1 mouse_genomes_project 5 127054649 127073017 + MGP_LPJ_P0073999 Rnf34 protein_coding protein_coding MGP_LPJ_T0075655.1 MGP_LPJ_G0030272.1 mouse_genomes_project 5 151373504 151446058 + MGP_LPJ_P0075655 protein_coding nonsense_mediated_decay MGP_LPJ_T0075656.1 MGP_LPJ_G0030272.1 mouse_genomes_project 5 151373512 151446472 + MGP_LPJ_P0075656 protein_coding protein_coding MGP_LPJ_T0074864.1 MGP_LPJ_G0030110.1 mouse_genomes_project 5 141307552 141654942 - MGP_LPJ_P0074864 Cux1 protein_coding protein_coding MGP_LPJ_T0074865.1 MGP_LPJ_G0030110.1 mouse_genomes_project 5 141307552 141423627 - MGP_LPJ_P0074865 Cux1 protein_coding protein_coding MGP_LPJ_T0074866.1 MGP_LPJ_G0030110.1 mouse_genomes_project 5 141307552 141654958 - MGP_LPJ_P0074866 Cux1 protein_coding protein_coding MGP_LPJ_T0074867.1 MGP_LPJ_G0030110.1 mouse_genomes_project 5 141307927 141654972 - MGP_LPJ_P0074867 Cux1 protein_coding nonsense_mediated_decay MGP_LPJ_T0074868.1 MGP_LPJ_G0030110.1 mouse_genomes_project 5 141309915 141654957 - MGP_LPJ_P0074868 Cux1 protein_coding nonsense_mediated_decay MGP_LPJ_T0074869.1 MGP_LPJ_G0030110.1 mouse_genomes_project 5 141327301 141655139 - MGP_LPJ_P0074869 Cux1 protein_coding protein_coding MGP_LPJ_T0074870.1 MGP_LPJ_G0030110.1 mouse_genomes_project 5 141329304 141654940 - MGP_LPJ_P0074870 Cux1 protein_coding protein_coding MGP_LPJ_T0074871.1 MGP_LPJ_G0030110.1 mouse_genomes_project 5 141335442 141654001 - MGP_LPJ_P0074871 Cux1 protein_coding protein_coding MGP_LPJ_T0074872.1 MGP_LPJ_G0030110.1 mouse_genomes_project 5 141335473 141653082 - MGP_LPJ_P0074872 Cux1 protein_coding protein_coding MGP_LPJ_T0074873.1 MGP_LPJ_G0030110.1 mouse_genomes_project 5 141335480 141363688 - Cux1 protein_coding processed_transcript MGP_LPJ_T0074874.1 MGP_LPJ_G0030110.1 mouse_genomes_project 5 141335778 141654913 - MGP_LPJ_P0074874 Cux1 protein_coding protein_coding MGP_LPJ_T0074875.1 MGP_LPJ_G0030110.1 mouse_genomes_project 5 141374481 141426963 - MGP_LPJ_P0074875 Cux1 protein_coding protein_coding MGP_LPJ_T0074876.1 MGP_LPJ_G0030110.1 mouse_genomes_project 5 141426014 141654946 - Cux1 protein_coding retained_intron MGP_LPJ_T0074877.1 MGP_LPJ_G0030110.1 mouse_genomes_project 5 141550388 141655184 - Cux1 protein_coding retained_intron MGP_LPJ_T0014994.1 MGP_LPJ_G0013085.1 mouse_genomes_project 5 79311085 79311449 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099571.1 MGP_LPJ_G0037834.1 mouse_genomes_project 5 49627930 49628037 - Gm22618 snRNA snRNA MGP_LPJ_T0001574.1 MGP_LPJ_G0001488.1 mouse_genomes_project 5 44873820 44874827 - TEC TEC MGP_LPJ_T0074855.1 MGP_LPJ_G0030108.1 mouse_genomes_project 5 141233160 141256559 - MGP_LPJ_P0074855 Prkrip1 protein_coding protein_coding MGP_LPJ_T0074856.1 MGP_LPJ_G0030108.1 mouse_genomes_project 5 141236255 141256506 - Prkrip1 protein_coding processed_transcript MGP_LPJ_T0074857.1 MGP_LPJ_G0030108.1 mouse_genomes_project 5 141236714 141255418 - MGP_LPJ_P0074857 Prkrip1 protein_coding nonsense_mediated_decay MGP_LPJ_T0074858.1 MGP_LPJ_G0030108.1 mouse_genomes_project 5 141236719 141256504 - MGP_LPJ_P0074858 Prkrip1 protein_coding protein_coding MGP_LPJ_T0008306.1 MGP_LPJ_G0006758.1 mouse_genomes_project 5 115293112 115301939 + Gm42491 lincRNA lincRNA MGP_LPJ_T0070057.1 MGP_LPJ_G0029207.1 mouse_genomes_project 5 16110214 16221315 - MGP_LPJ_P0070057 Gnai1 protein_coding protein_coding MGP_LPJ_T0001675.1 MGP_LPJ_G0001588.1 mouse_genomes_project 5 66270302 66273665 - TEC TEC MGP_LPJ_T0001625.1 MGP_LPJ_G0001539.1 mouse_genomes_project 5 51984901 51987344 - TEC TEC MGP_LPJ_T0015159.1 MGP_LPJ_G0013250.1 mouse_genomes_project 5 152492154 152493026 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004677.1 MGP_LPJ_G0004051.1 mouse_genomes_project 5 28930620 28942543 + Gm42765 antisense antisense MGP_LPJ_T0004678.1 MGP_LPJ_G0004051.1 mouse_genomes_project 5 28930663 28947315 + Gm42765 antisense antisense MGP_LPJ_T0008176.1 MGP_LPJ_G0006665.1 mouse_genomes_project 5 73699184 73714773 - 1700025M24Rik lincRNA lincRNA MGP_LPJ_T0008177.1 MGP_LPJ_G0006665.1 mouse_genomes_project 5 73699184 73714761 - 1700025M24Rik lincRNA lincRNA MGP_LPJ_T0008178.1 MGP_LPJ_G0006665.1 mouse_genomes_project 5 73699202 73714767 - 1700025M24Rik lincRNA lincRNA MGP_LPJ_T0001858.1 MGP_LPJ_G0001769.1 mouse_genomes_project 5 131469216 131472603 + TEC TEC MGP_LPJ_T0001744.1 MGP_LPJ_G0001656.1 mouse_genomes_project 5 94677322 94677915 - TEC TEC MGP_LPJ_T0074937.1 MGP_LPJ_G0030124.1 mouse_genomes_project 5 142480890 142485866 + MGP_LPJ_P0074937 Ache protein_coding protein_coding MGP_LPJ_T0074938.1 MGP_LPJ_G0030124.1 mouse_genomes_project 5 142481137 142485866 + MGP_LPJ_P0074938 Ache protein_coding protein_coding MGP_LPJ_T0074939.1 MGP_LPJ_G0030124.1 mouse_genomes_project 5 142481137 142485866 + MGP_LPJ_P0074939 Ache protein_coding protein_coding MGP_LPJ_T0074940.1 MGP_LPJ_G0030124.1 mouse_genomes_project 5 142481648 142490197 + MGP_LPJ_P0074940 Ache protein_coding protein_coding MGP_LPJ_T0074941.1 MGP_LPJ_G0030124.1 mouse_genomes_project 5 142481654 142490192 + MGP_LPJ_P0074941 Ache protein_coding protein_coding MGP_LPJ_T0074942.1 MGP_LPJ_G0030124.1 mouse_genomes_project 5 142481655 142490191 + MGP_LPJ_P0074942 Ache protein_coding protein_coding MGP_LPJ_T0074943.1 MGP_LPJ_G0030124.1 mouse_genomes_project 5 142481656 142488060 + Ache protein_coding retained_intron MGP_LPJ_T0074944.1 MGP_LPJ_G0030124.1 mouse_genomes_project 5 142484799 142485866 + MGP_LPJ_P0074944 Ache protein_coding protein_coding MGP_LPJ_T0074945.1 MGP_LPJ_G0030124.1 mouse_genomes_project 5 142484958 142485866 + MGP_LPJ_P0074945 Ache protein_coding protein_coding MGP_LPJ_T0001873.1 MGP_LPJ_G0001784.1 mouse_genomes_project 5 135569298 135572688 - TEC TEC MGP_LPJ_T0073395.1 MGP_LPJ_G0029849.1 mouse_genomes_project 5 118161427 118187039 - MGP_LPJ_P0073395 Gm20499 protein_coding protein_coding MGP_LPJ_T0074465.1 MGP_LPJ_G0030041.1 mouse_genomes_project 5 134630110 134644620 - MGP_LPJ_P0074465 Asl protein_coding protein_coding MGP_LPJ_T0074466.1 MGP_LPJ_G0030041.1 mouse_genomes_project 5 134630346 134633575 - MGP_LPJ_P0074466 Asl protein_coding protein_coding MGP_LPJ_T0074467.1 MGP_LPJ_G0030041.1 mouse_genomes_project 5 134630347 134650974 - MGP_LPJ_P0074467 Asl protein_coding protein_coding MGP_LPJ_T0074468.1 MGP_LPJ_G0030041.1 mouse_genomes_project 5 134630356 134646775 - MGP_LPJ_P0074468 Asl protein_coding protein_coding MGP_LPJ_T0074469.1 MGP_LPJ_G0030041.1 mouse_genomes_project 5 134632299 134644539 - MGP_LPJ_P0074469 Asl protein_coding protein_coding MGP_LPJ_T0074470.1 MGP_LPJ_G0030041.1 mouse_genomes_project 5 134635606 134644612 - Asl protein_coding processed_transcript MGP_LPJ_T0074471.1 MGP_LPJ_G0030041.1 mouse_genomes_project 5 134639954 134644556 - MGP_LPJ_P0074471 Asl protein_coding protein_coding MGP_LPJ_T0074472.1 MGP_LPJ_G0030041.1 mouse_genomes_project 5 134642529 134644584 - Asl protein_coding retained_intron MGP_LPJ_T0074345.1 MGP_LPJ_G0030017.1 mouse_genomes_project 5 129906716 130007541 + MGP_LPJ_P0074345 Tmem132b protein_coding protein_coding MGP_LPJ_T0074346.1 MGP_LPJ_G0030017.1 mouse_genomes_project 5 129907327 130179711 + MGP_LPJ_P0074346 Tmem132b protein_coding protein_coding MGP_LPJ_T0074347.1 MGP_LPJ_G0030017.1 mouse_genomes_project 5 130007248 130089785 + Tmem132b protein_coding retained_intron MGP_LPJ_T0071618.1 MGP_LPJ_G0029477.1 mouse_genomes_project 5 65533910 65538378 + Lias protein_coding retained_intron MGP_LPJ_T0071619.1 MGP_LPJ_G0029477.1 mouse_genomes_project 5 65533930 65537807 + Lias protein_coding retained_intron MGP_LPJ_T0071620.1 MGP_LPJ_G0029477.1 mouse_genomes_project 5 65533931 65539881 + MGP_LPJ_P0071620 Lias protein_coding protein_coding MGP_LPJ_T0071621.1 MGP_LPJ_G0029477.1 mouse_genomes_project 5 65533995 65550990 + MGP_LPJ_P0071621 Lias protein_coding protein_coding MGP_LPJ_T0071622.1 MGP_LPJ_G0029477.1 mouse_genomes_project 5 65539736 65542113 + Lias protein_coding retained_intron MGP_LPJ_T0075447.1 MGP_LPJ_G0030226.1 mouse_genomes_project 5 149090712 149118528 + MGP_LPJ_P0075447 Spdye4b protein_coding protein_coding MGP_LPJ_T0075448.1 MGP_LPJ_G0030226.1 mouse_genomes_project 5 149091179 149117754 + MGP_LPJ_P0075448 Spdye4b protein_coding protein_coding MGP_LPJ_T0075449.1 MGP_LPJ_G0030226.1 mouse_genomes_project 5 149103646 149117666 + Spdye4b protein_coding processed_transcript MGP_LPJ_T0072213.1 MGP_LPJ_G0029589.1 mouse_genomes_project 5 88921685 88942455 - MGP_LPJ_P0072213 Sult1e1 protein_coding protein_coding MGP_LPJ_T0015037.1 MGP_LPJ_G0013128.1 mouse_genomes_project 5 102703691 102704044 - processed_pseudogene processed_pseudogene MGP_LPJ_T0072538.1 MGP_LPJ_G0029668.1 mouse_genomes_project 5 98923459 99023392 + MGP_LPJ_P0072538 Bmp2k protein_coding protein_coding MGP_LPJ_T0072539.1 MGP_LPJ_G0029668.1 mouse_genomes_project 5 98923459 99000629 + MGP_LPJ_P0072539 Bmp2k protein_coding protein_coding MGP_LPJ_T0010717.1 MGP_LPJ_G0008835.1 mouse_genomes_project 5 94350862 94350974 - Mir1961 miRNA miRNA MGP_LPJ_T0072958.1 MGP_LPJ_G0029761.1 mouse_genomes_project 5 111357458 111371579 - Dgkq protein_coding retained_intron MGP_LPJ_T0072959.1 MGP_LPJ_G0029761.1 mouse_genomes_project 5 111357458 111381311 - MGP_LPJ_P0072959 Dgkq protein_coding nonsense_mediated_decay MGP_LPJ_T0072960.1 MGP_LPJ_G0029761.1 mouse_genomes_project 5 111357458 111371579 - MGP_LPJ_P0072960 Dgkq protein_coding protein_coding MGP_LPJ_T0072961.1 MGP_LPJ_G0029761.1 mouse_genomes_project 5 111357458 111371579 - MGP_LPJ_P0072961 Dgkq protein_coding nonsense_mediated_decay MGP_LPJ_T0072962.1 MGP_LPJ_G0029761.1 mouse_genomes_project 5 111357458 111371579 - MGP_LPJ_P0072962 Dgkq protein_coding nonsense_mediated_decay MGP_LPJ_T0072963.1 MGP_LPJ_G0029761.1 mouse_genomes_project 5 111357812 111371579 - Dgkq protein_coding retained_intron MGP_LPJ_T0072964.1 MGP_LPJ_G0029761.1 mouse_genomes_project 5 111357812 111364415 - Dgkq protein_coding retained_intron MGP_LPJ_T0072965.1 MGP_LPJ_G0029761.1 mouse_genomes_project 5 111358039 111360694 - Dgkq protein_coding retained_intron MGP_LPJ_T0072966.1 MGP_LPJ_G0029761.1 mouse_genomes_project 5 111361623 111364259 - Dgkq protein_coding retained_intron MGP_LPJ_T0072967.1 MGP_LPJ_G0029761.1 mouse_genomes_project 5 111364259 111365900 - Dgkq protein_coding retained_intron MGP_LPJ_T0072968.1 MGP_LPJ_G0029761.1 mouse_genomes_project 5 111365310 111366764 - Dgkq protein_coding retained_intron MGP_LPJ_T0018108.1 MGP_LPJ_G0015519.1 mouse_genomes_project 5 67737068 67744006 + C330024D21Rik processed_transcript retained_intron MGP_LPJ_T0018109.1 MGP_LPJ_G0015519.1 mouse_genomes_project 5 67737071 67751695 + C330024D21Rik processed_transcript lincRNA MGP_LPJ_T0018110.1 MGP_LPJ_G0015519.1 mouse_genomes_project 5 67737074 67751361 + C330024D21Rik processed_transcript lincRNA MGP_LPJ_T0072033.1 MGP_LPJ_G0029547.1 mouse_genomes_project 5 77217630 77279988 + Cep135 protein_coding retained_intron MGP_LPJ_T0072034.1 MGP_LPJ_G0029547.1 mouse_genomes_project 5 77217633 77281546 + MGP_LPJ_P0072034 Cep135 protein_coding protein_coding MGP_LPJ_T0072035.1 MGP_LPJ_G0029547.1 mouse_genomes_project 5 77220641 77281545 + MGP_LPJ_P0072035 Cep135 protein_coding protein_coding MGP_LPJ_T0001526.1 MGP_LPJ_G0001441.1 mouse_genomes_project 5 30634494 30637395 - TEC TEC MGP_LPJ_T0001527.1 MGP_LPJ_G0001441.1 mouse_genomes_project 5 30634494 30637392 - TEC TEC MGP_LPJ_T0014923.1 MGP_LPJ_G0013014.1 mouse_genomes_project 5 49220937 49223234 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008104.1 MGP_LPJ_G0006611.1 mouse_genomes_project 5 32954107 32972499 - Gm43458 lincRNA lincRNA MGP_LPJ_T0014891.1 MGP_LPJ_G0012982.1 mouse_genomes_project 5 32298414 32298664 - processed_pseudogene processed_pseudogene MGP_LPJ_T0075288.1 MGP_LPJ_G0030191.1 mouse_genomes_project 5 145334429 145366060 - MGP_LPJ_P0075288 Micall2 protein_coding protein_coding MGP_LPJ_T0075289.1 MGP_LPJ_G0030191.1 mouse_genomes_project 5 145334627 145337811 - Micall2 protein_coding retained_intron MGP_LPJ_T0075290.1 MGP_LPJ_G0030191.1 mouse_genomes_project 5 145337718 145339203 - MGP_LPJ_P0075290 Micall2 protein_coding nonsense_mediated_decay MGP_LPJ_T0010738.1 MGP_LPJ_G0008856.1 mouse_genomes_project 5 139187120 139187189 + Mir3965 miRNA miRNA MGP_LPJ_T0070435.1 MGP_LPJ_G0029284.1 mouse_genomes_project 5 28548959 28585792 - MGP_LPJ_P0070435 Hadha protein_coding protein_coding MGP_LPJ_T0070436.1 MGP_LPJ_G0029284.1 mouse_genomes_project 5 28550081 28585606 - Hadha protein_coding processed_transcript MGP_LPJ_T0070437.1 MGP_LPJ_G0029284.1 mouse_genomes_project 5 28550554 28550961 - Hadha protein_coding processed_transcript MGP_LPJ_T0070438.1 MGP_LPJ_G0029284.1 mouse_genomes_project 5 28552124 28557771 - Hadha protein_coding retained_intron MGP_LPJ_T0070439.1 MGP_LPJ_G0029284.1 mouse_genomes_project 5 28557387 28565692 - MGP_LPJ_P0070439 Hadha protein_coding nonsense_mediated_decay MGP_LPJ_T0070440.1 MGP_LPJ_G0029284.1 mouse_genomes_project 5 28559366 28571684 - Hadha protein_coding retained_intron MGP_LPJ_T0070441.1 MGP_LPJ_G0029284.1 mouse_genomes_project 5 28563884 28585592 - Hadha protein_coding retained_intron MGP_LPJ_T0070442.1 MGP_LPJ_G0029284.1 mouse_genomes_project 5 28577720 28580175 - Hadha protein_coding retained_intron MGP_LPJ_T0070443.1 MGP_LPJ_G0029284.1 mouse_genomes_project 5 28584551 28585620 - Hadha protein_coding retained_intron MGP_LPJ_T0075427.1 MGP_LPJ_G0030223.1 mouse_genomes_project 5 148862647 148875442 + MGP_LPJ_P0075427 Fscn1 protein_coding protein_coding MGP_LPJ_T0075428.1 MGP_LPJ_G0030223.1 mouse_genomes_project 5 148862680 148875440 + MGP_LPJ_P0075428 Fscn1 protein_coding protein_coding MGP_LPJ_T0075429.1 MGP_LPJ_G0030223.1 mouse_genomes_project 5 148863147 148874426 + MGP_LPJ_P0075429 Fscn1 protein_coding protein_coding MGP_LPJ_T0075430.1 MGP_LPJ_G0030223.1 mouse_genomes_project 5 148865252 148872860 + Fscn1 protein_coding processed_transcript MGP_LPJ_T0075431.1 MGP_LPJ_G0030223.1 mouse_genomes_project 5 148865549 148874209 + Fscn1 protein_coding processed_transcript MGP_LPJ_T0075432.1 MGP_LPJ_G0030223.1 mouse_genomes_project 5 148866818 148872982 + Fscn1 protein_coding processed_transcript MGP_LPJ_T0075433.1 MGP_LPJ_G0030223.1 mouse_genomes_project 5 148872392 148874245 + Fscn1 protein_coding retained_intron MGP_LPJ_T0001750.1 MGP_LPJ_G0001662.1 mouse_genomes_project 5 98858593 98859113 + TEC TEC MGP_LPJ_T0100830.1 MGP_LPJ_G0039093.1 mouse_genomes_project 5 56777087 56777215 - Gm23015 snoRNA snoRNA MGP_LPJ_T0100839.1 MGP_LPJ_G0039102.1 mouse_genomes_project 5 74585562 74585683 + Snora26 snoRNA snoRNA MGP_LPJ_T0001587.1 MGP_LPJ_G0001501.1 mouse_genomes_project 5 47897361 47899846 - TEC TEC MGP_LPJ_T0001733.1 MGP_LPJ_G0001645.1 mouse_genomes_project 5 82510306 82511253 + TEC TEC MGP_LPJ_T0004902.1 MGP_LPJ_G0004214.1 mouse_genomes_project 5 147135401 147143149 - Gm16035 antisense antisense MGP_LPJ_T0004720.1 MGP_LPJ_G0004084.1 mouse_genomes_project 5 52536255 52537757 - Gm17182 antisense antisense MGP_LPJ_T0001807.1 MGP_LPJ_G0001719.1 mouse_genomes_project 5 119893514 119894977 - TEC TEC MGP_LPJ_T0069887.1 MGP_LPJ_G0029179.1 mouse_genomes_project 5 2668329 2699137 - MGP_LPJ_P0069887 Steap2 protein_coding protein_coding MGP_LPJ_T0069888.1 MGP_LPJ_G0029179.1 mouse_genomes_project 5 2668331 2686564 - MGP_LPJ_P0069888 Steap2 protein_coding protein_coding MGP_LPJ_T0069889.1 MGP_LPJ_G0029179.1 mouse_genomes_project 5 2669454 2698619 - MGP_LPJ_P0069889 Steap2 protein_coding protein_coding MGP_LPJ_T0069890.1 MGP_LPJ_G0029179.1 mouse_genomes_project 5 2674436 2698611 - MGP_LPJ_P0069890 Steap2 protein_coding protein_coding MGP_LPJ_T0069891.1 MGP_LPJ_G0029179.1 mouse_genomes_project 5 2674989 2698626 - MGP_LPJ_P0069891 Steap2 protein_coding protein_coding MGP_LPJ_T0069892.1 MGP_LPJ_G0029179.1 mouse_genomes_project 5 2675223 2680785 - Steap2 protein_coding processed_transcript MGP_LPJ_T0069893.1 MGP_LPJ_G0029179.1 mouse_genomes_project 5 2675228 2698619 - MGP_LPJ_P0069893 Steap2 protein_coding protein_coding MGP_LPJ_T0069894.1 MGP_LPJ_G0029179.1 mouse_genomes_project 5 2677003 2698885 - MGP_LPJ_P0069894 Steap2 protein_coding protein_coding MGP_LPJ_T0069895.1 MGP_LPJ_G0029179.1 mouse_genomes_project 5 2679594 2699092 - Steap2 protein_coding retained_intron MGP_LPJ_T0075279.1 MGP_LPJ_G0030188.1 mouse_genomes_project 5 145014566 145019216 + MGP_LPJ_P0075279 Gper1 protein_coding protein_coding MGP_LPJ_T0075280.1 MGP_LPJ_G0030188.1 mouse_genomes_project 5 145014695 145017305 + Gper1 protein_coding processed_transcript MGP_LPJ_T0008346.1 MGP_LPJ_G0006783.1 mouse_genomes_project 5 122055504 122056027 - Gm28563 lincRNA lincRNA MGP_LPJ_T0070713.1 MGP_LPJ_G0029326.1 mouse_genomes_project 5 29958745 29961482 + 4930548H24Rik protein_coding retained_intron MGP_LPJ_T0070714.1 MGP_LPJ_G0029326.1 mouse_genomes_project 5 29958864 29961482 + MGP_LPJ_P0070714 4930548H24Rik protein_coding protein_coding MGP_LPJ_T0008453.1 MGP_LPJ_G0006856.1 mouse_genomes_project 5 153009242 153010117 + 4930573C15Rik lincRNA lincRNA MGP_LPJ_T0008253.1 MGP_LPJ_G0006725.1 mouse_genomes_project 5 105423027 105494270 - 4930429D17Rik lincRNA lincRNA MGP_LPJ_T0099600.1 MGP_LPJ_G0037863.1 mouse_genomes_project 5 102618032 102618192 - Gm23173 snRNA snRNA MGP_LPJ_T0001796.1 MGP_LPJ_G0001708.1 mouse_genomes_project 5 116542924 116544222 + TEC TEC MGP_LPJ_T0015082.1 MGP_LPJ_G0013173.1 mouse_genomes_project 5 117015114 117015318 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014893.1 MGP_LPJ_G0012984.1 mouse_genomes_project 5 32393853 32394165 + processed_pseudogene processed_pseudogene MGP_LPJ_T0071881.1 MGP_LPJ_G0029521.1 mouse_genomes_project 5 73420052 73427500 + MGP_LPJ_P0071881 protein_coding protein_coding MGP_LPJ_T0073731.1 MGP_LPJ_G0029917.1 mouse_genomes_project 5 124673582 124691015 - MGP_LPJ_P0073731 Oas1c protein_coding protein_coding MGP_LPJ_T0073732.1 MGP_LPJ_G0029917.1 mouse_genomes_project 5 124678098 124690989 - MGP_LPJ_P0073732 Oas1c protein_coding protein_coding MGP_LPJ_T0073733.1 MGP_LPJ_G0029917.1 mouse_genomes_project 5 124680494 124691015 - Oas1c protein_coding processed_transcript MGP_LPJ_T0014868.1 MGP_LPJ_G0012959.1 mouse_genomes_project 5 25141710 25141845 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004658.1 MGP_LPJ_G0004036.1 mouse_genomes_project 5 12150653 12169695 - Gm26918 antisense antisense MGP_LPJ_T0001623.1 MGP_LPJ_G0001537.1 mouse_genomes_project 5 51596835 51598221 - TEC TEC MGP_LPJ_T0008208.1 MGP_LPJ_G0006689.1 mouse_genomes_project 5 87986616 88103147 + Gm43055 lincRNA lincRNA MGP_LPJ_T0014856.1 MGP_LPJ_G0012947.1 mouse_genomes_project 5 23316570 23317136 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001777.1 MGP_LPJ_G0001689.1 mouse_genomes_project 5 110443341 110444687 - TEC TEC MGP_LPJ_T0014989.1 MGP_LPJ_G0013080.1 mouse_genomes_project 5 77382030 77382471 - processed_pseudogene processed_pseudogene MGP_LPJ_T0072995.1 MGP_LPJ_G0029771.1 mouse_genomes_project 5 112022817 112033672 - MGP_LPJ_P0072995 protein_coding protein_coding MGP_LPJ_T0001558.1 MGP_LPJ_G0001472.1 mouse_genomes_project 5 43051692 43052239 + TEC TEC MGP_LPJ_T0073699.1 MGP_LPJ_G0029909.1 mouse_genomes_project 5 124428328 124454469 - MGP_LPJ_P0073699 Rita1 protein_coding protein_coding MGP_LPJ_T0073700.1 MGP_LPJ_G0029909.1 mouse_genomes_project 5 124437735 124453767 - MGP_LPJ_P0073700 Rita1 protein_coding protein_coding MGP_LPJ_T0073701.1 MGP_LPJ_G0029909.1 mouse_genomes_project 5 124437736 124445185 - Rita1 protein_coding processed_transcript MGP_LPJ_T0073702.1 MGP_LPJ_G0029909.1 mouse_genomes_project 5 124446503 124454719 - Rita1 protein_coding processed_transcript MGP_LPJ_T0073703.1 MGP_LPJ_G0029909.1 mouse_genomes_project 5 124448522 124454719 - MGP_LPJ_P0073703 Rita1 protein_coding protein_coding MGP_LPJ_T0073704.1 MGP_LPJ_G0029909.1 mouse_genomes_project 5 124448522 124454719 - MGP_LPJ_P0073704 Rita1 protein_coding protein_coding MGP_LPJ_T0073705.1 MGP_LPJ_G0029909.1 mouse_genomes_project 5 124449375 124454700 - MGP_LPJ_P0073705 Rita1 protein_coding protein_coding MGP_LPJ_T0008072.1 MGP_LPJ_G0006590.1 mouse_genomes_project 5 21429549 21465048 - lincRNA lincRNA MGP_LPJ_T0008073.1 MGP_LPJ_G0006590.1 mouse_genomes_project 5 21454066 21465021 - lincRNA lincRNA MGP_LPJ_T0008074.1 MGP_LPJ_G0006590.1 mouse_genomes_project 5 21463514 21465631 - lincRNA lincRNA MGP_LPJ_T0008075.1 MGP_LPJ_G0006590.1 mouse_genomes_project 5 21463991 21465981 - lincRNA lincRNA MGP_LPJ_T0099588.1 MGP_LPJ_G0037851.1 mouse_genomes_project 5 81010536 81010643 + Gm24304 snRNA snRNA MGP_LPJ_T0071466.1 MGP_LPJ_G0029448.1 mouse_genomes_project 5 52208685 52237223 + MGP_LPJ_P0071466 Pi4k2b protein_coding protein_coding MGP_LPJ_T0071467.1 MGP_LPJ_G0029448.1 mouse_genomes_project 5 52208717 52218540 + MGP_LPJ_P0071467 Pi4k2b protein_coding nonsense_mediated_decay MGP_LPJ_T0071468.1 MGP_LPJ_G0029448.1 mouse_genomes_project 5 52208721 52237223 + MGP_LPJ_P0071468 Pi4k2b protein_coding protein_coding MGP_LPJ_T0071469.1 MGP_LPJ_G0029448.1 mouse_genomes_project 5 52221628 52224510 + Pi4k2b protein_coding retained_intron MGP_LPJ_T0014847.1 MGP_LPJ_G0012938.1 mouse_genomes_project 5 20926648 20927257 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008440.1 MGP_LPJ_G0006846.1 mouse_genomes_project 5 149074481 149075406 - Rbakdn lincRNA lincRNA MGP_LPJ_T0008441.1 MGP_LPJ_G0006846.1 mouse_genomes_project 5 149074481 149075454 - Rbakdn lincRNA lincRNA MGP_LPJ_T0014956.1 MGP_LPJ_G0013047.1 mouse_genomes_project 5 64027321 64027804 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008271.1 MGP_LPJ_G0006738.1 mouse_genomes_project 5 109042915 109121375 - Gm28050 lincRNA lincRNA MGP_LPJ_T0008272.1 MGP_LPJ_G0006738.1 mouse_genomes_project 5 109104382 109121378 - Gm28050 lincRNA lincRNA MGP_LPJ_T0098640.1 MGP_LPJ_G0036913.1 mouse_genomes_project 5 150214191 150220784 + sense_intronic sense_intronic MGP_LPJ_T0098641.1 MGP_LPJ_G0036913.1 mouse_genomes_project 5 150215952 150220752 + sense_intronic sense_intronic MGP_LPJ_T0015122.1 MGP_LPJ_G0013213.1 mouse_genomes_project 5 143176127 143176515 - processed_pseudogene processed_pseudogene MGP_LPJ_T0073396.1 MGP_LPJ_G0029850.1 mouse_genomes_project 5 118234212 118265826 + MGP_LPJ_P0073396 4930519G04Rik protein_coding protein_coding MGP_LPJ_T0073398.1 MGP_LPJ_G0029850.1 mouse_genomes_project 5 118241674 118258700 + 4930519G04Rik protein_coding retained_intron MGP_LPJ_T0073399.1 MGP_LPJ_G0029850.1 mouse_genomes_project 5 118245458 118261745 + MGP_LPJ_P0073399 4930519G04Rik protein_coding protein_coding MGP_LPJ_T0073400.1 MGP_LPJ_G0029850.1 mouse_genomes_project 5 118247447 118261745 + MGP_LPJ_P0073400 4930519G04Rik protein_coding protein_coding MGP_LPJ_T0075185.1 MGP_LPJ_G0030172.1 mouse_genomes_project 5 143950002 143969051 + MGP_LPJ_P0075185 Zfp157 protein_coding protein_coding MGP_LPJ_T0075186.1 MGP_LPJ_G0030172.1 mouse_genomes_project 5 143950013 143956558 + Zfp157 protein_coding retained_intron MGP_LPJ_T0075187.1 MGP_LPJ_G0030172.1 mouse_genomes_project 5 143950041 143955634 + Zfp157 protein_coding retained_intron MGP_LPJ_T0075188.1 MGP_LPJ_G0030172.1 mouse_genomes_project 5 143950045 143956602 + Zfp157 protein_coding retained_intron MGP_LPJ_T0075189.1 MGP_LPJ_G0030172.1 mouse_genomes_project 5 143950053 143964696 + MGP_LPJ_P0075189 Zfp157 protein_coding protein_coding MGP_LPJ_T0075190.1 MGP_LPJ_G0030172.1 mouse_genomes_project 5 143950074 143964708 + MGP_LPJ_P0075190 Zfp157 protein_coding protein_coding MGP_LPJ_T0101355.1 MGP_LPJ_G0039558.1 mouse_genomes_project 5 57588696 57589270 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0010731.1 MGP_LPJ_G0008849.1 mouse_genomes_project 5 124740059 124740185 - Gm22907 miRNA miRNA MGP_LPJ_T0069750.1 MGP_LPJ_G0029158.1 mouse_genomes_project 5 88826 93056 + MGP_LPJ_P0069750 Cdk6 protein_coding protein_coding MGP_LPJ_T0069751.1 MGP_LPJ_G0029158.1 mouse_genomes_project 5 91073 93040 + MGP_LPJ_P0069751 Cdk6 protein_coding protein_coding MGP_LPJ_T0069753.1 MGP_LPJ_G0029158.1 mouse_genomes_project 5 92518 187250 + MGP_LPJ_P0069753 Cdk6 protein_coding protein_coding MGP_LPJ_T0069754.1 MGP_LPJ_G0029158.1 mouse_genomes_project 5 92914 375302 + MGP_LPJ_P0069754 Cdk6 protein_coding protein_coding MGP_LPJ_T0069756.1 MGP_LPJ_G0029158.1 mouse_genomes_project 5 319481 321713 + Cdk6 protein_coding retained_intron MGP_LPJ_T0014884.1 MGP_LPJ_G0012975.1 mouse_genomes_project 5 31006447 31006773 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001689.1 MGP_LPJ_G0001602.1 mouse_genomes_project 5 67394657 67397310 + TEC TEC MGP_LPJ_T0001738.1 MGP_LPJ_G0001650.1 mouse_genomes_project 5 91856257 91858900 + TEC TEC MGP_LPJ_T0098425.1 MGP_LPJ_G0036706.1 mouse_genomes_project 5 93988208 93989585 + Gm26039 scaRNA scaRNA MGP_LPJ_T0073301.1 MGP_LPJ_G0029833.1 mouse_genomes_project 5 117406298 117410543 - MGP_LPJ_P0073301 Alkbh2 protein_coding protein_coding MGP_LPJ_T0073302.1 MGP_LPJ_G0029833.1 mouse_genomes_project 5 117406307 117410585 - MGP_LPJ_P0073302 Alkbh2 protein_coding protein_coding MGP_LPJ_T0073303.1 MGP_LPJ_G0029833.1 mouse_genomes_project 5 117409972 117410548 - MGP_LPJ_P0073303 Alkbh2 protein_coding protein_coding MGP_LPJ_T0004694.1 MGP_LPJ_G0004066.1 mouse_genomes_project 5 35529225 35531045 + Gm43701 antisense antisense MGP_LPJ_T0001700.1 MGP_LPJ_G0001613.1 mouse_genomes_project 5 69487140 69488171 - TEC TEC MGP_LPJ_T0074413.1 MGP_LPJ_G0030030.1 mouse_genomes_project 5 134271308 134286828 - MGP_LPJ_P0074413 Zfp11 protein_coding protein_coding MGP_LPJ_T0004900.1 MGP_LPJ_G0004213.1 mouse_genomes_project 5 145871527 145874856 + Gm16120 antisense antisense MGP_LPJ_T0004901.1 MGP_LPJ_G0004213.1 mouse_genomes_project 5 145873646 145874856 + Gm16120 antisense antisense MGP_LPJ_T0070702.1 MGP_LPJ_G0029324.1 mouse_genomes_project 5 29744876 29777689 + MGP_LPJ_P0070702 Gckr protein_coding protein_coding MGP_LPJ_T0070703.1 MGP_LPJ_G0029324.1 mouse_genomes_project 5 29744987 29777670 + Gckr protein_coding retained_intron MGP_LPJ_T0070704.1 MGP_LPJ_G0029324.1 mouse_genomes_project 5 29745014 29777677 + MGP_LPJ_P0070704 Gckr protein_coding protein_coding MGP_LPJ_T0070705.1 MGP_LPJ_G0029324.1 mouse_genomes_project 5 29745045 29748014 + MGP_LPJ_P0070705 Gckr protein_coding protein_coding MGP_LPJ_T0070706.1 MGP_LPJ_G0029324.1 mouse_genomes_project 5 29746134 29755204 + Gckr protein_coding retained_intron MGP_LPJ_T0070707.1 MGP_LPJ_G0029324.1 mouse_genomes_project 5 29746939 29754110 + Gckr protein_coding retained_intron MGP_LPJ_T0070708.1 MGP_LPJ_G0029324.1 mouse_genomes_project 5 29773344 29777672 + Gckr protein_coding retained_intron MGP_LPJ_T0072278.1 MGP_LPJ_G0029609.1 mouse_genomes_project 5 89915486 89923256 - Jchain protein_coding retained_intron MGP_LPJ_T0072279.1 MGP_LPJ_G0029609.1 mouse_genomes_project 5 89916200 89925331 - MGP_LPJ_P0072279 Jchain protein_coding protein_coding MGP_LPJ_T0008344.1 MGP_LPJ_G0006782.1 mouse_genomes_project 5 120973752 120978281 + Gm15728 lincRNA lincRNA MGP_LPJ_T0008345.1 MGP_LPJ_G0006782.1 mouse_genomes_project 5 120973828 120975202 + Gm15728 lincRNA lincRNA MGP_LPJ_T0074000.1 MGP_LPJ_G0029962.1 mouse_genomes_project 5 127079728 127204213 - MGP_LPJ_P0074000 Kdm2b protein_coding protein_coding MGP_LPJ_T0074001.1 MGP_LPJ_G0029962.1 mouse_genomes_project 5 127079731 127108865 - MGP_LPJ_P0074001 Kdm2b protein_coding protein_coding MGP_LPJ_T0074002.1 MGP_LPJ_G0029962.1 mouse_genomes_project 5 127079742 127204410 - MGP_LPJ_P0074002 Kdm2b protein_coding protein_coding MGP_LPJ_T0074003.1 MGP_LPJ_G0029962.1 mouse_genomes_project 5 127079744 127203647 - MGP_LPJ_P0074003 Kdm2b protein_coding protein_coding MGP_LPJ_T0074004.1 MGP_LPJ_G0029962.1 mouse_genomes_project 5 127080424 127204898 - MGP_LPJ_P0074004 Kdm2b protein_coding nonsense_mediated_decay MGP_LPJ_T0074005.1 MGP_LPJ_G0029962.1 mouse_genomes_project 5 127080818 127204927 - MGP_LPJ_P0074005 Kdm2b protein_coding protein_coding MGP_LPJ_T0074006.1 MGP_LPJ_G0029962.1 mouse_genomes_project 5 127084595 127090617 - Kdm2b protein_coding retained_intron MGP_LPJ_T0074007.1 MGP_LPJ_G0029962.1 mouse_genomes_project 5 127090039 127095839 - MGP_LPJ_P0074007 Kdm2b protein_coding protein_coding MGP_LPJ_T0074008.1 MGP_LPJ_G0029962.1 mouse_genomes_project 5 127090166 127091765 - Kdm2b protein_coding retained_intron MGP_LPJ_T0074009.1 MGP_LPJ_G0029962.1 mouse_genomes_project 5 127091747 127127009 - Kdm2b protein_coding processed_transcript MGP_LPJ_T0074010.1 MGP_LPJ_G0029962.1 mouse_genomes_project 5 127092959 127131403 - Kdm2b protein_coding processed_transcript MGP_LPJ_T0074011.1 MGP_LPJ_G0029962.1 mouse_genomes_project 5 127092969 127130844 - Kdm2b protein_coding retained_intron MGP_LPJ_T0074012.1 MGP_LPJ_G0029962.1 mouse_genomes_project 5 127095263 127204206 - Kdm2b protein_coding retained_intron MGP_LPJ_T0074013.1 MGP_LPJ_G0029962.1 mouse_genomes_project 5 127141710 127203650 - MGP_LPJ_P0074013 Kdm2b protein_coding protein_coding MGP_LPJ_T0074014.1 MGP_LPJ_G0029962.1 mouse_genomes_project 5 127141813 127166015 - MGP_LPJ_P0074014 Kdm2b protein_coding protein_coding MGP_LPJ_T0074015.1 MGP_LPJ_G0029962.1 mouse_genomes_project 5 127141896 127161500 - Kdm2b protein_coding processed_transcript MGP_LPJ_T0074016.1 MGP_LPJ_G0029962.1 mouse_genomes_project 5 127144065 127166623 - Kdm2b protein_coding processed_transcript MGP_LPJ_T0074017.1 MGP_LPJ_G0029962.1 mouse_genomes_project 5 127144085 127165499 - Kdm2b protein_coding processed_transcript MGP_LPJ_T0074018.1 MGP_LPJ_G0029962.1 mouse_genomes_project 5 127149822 127204213 - Kdm2b protein_coding retained_intron MGP_LPJ_T0074019.1 MGP_LPJ_G0029962.1 mouse_genomes_project 5 127161240 127200122 - Kdm2b protein_coding processed_transcript MGP_LPJ_T0014853.1 MGP_LPJ_G0012944.1 mouse_genomes_project 5 22323948 22324346 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001825.1 MGP_LPJ_G0001737.1 mouse_genomes_project 5 124598210 124599483 + TEC TEC MGP_LPJ_T0001771.1 MGP_LPJ_G0001683.1 mouse_genomes_project 5 108000579 108002751 + TEC TEC MGP_LPJ_T0008224.1 MGP_LPJ_G0006705.1 mouse_genomes_project 5 98921976 98923135 - Gm9484 lincRNA lincRNA MGP_LPJ_T0001852.1 MGP_LPJ_G0001764.1 mouse_genomes_project 5 128782260 128784895 + TEC TEC MGP_LPJ_T0001853.1 MGP_LPJ_G0001764.1 mouse_genomes_project 5 128783850 128785024 + TEC TEC MGP_LPJ_T0001648.1 MGP_LPJ_G0001562.1 mouse_genomes_project 5 62598875 62599919 - TEC TEC MGP_LPJ_T0008343.1 MGP_LPJ_G0006781.1 mouse_genomes_project 5 120891337 120894267 - BC051077 lincRNA lincRNA MGP_LPJ_T0001821.1 MGP_LPJ_G0001733.1 mouse_genomes_project 5 122711985 122714420 - TEC TEC MGP_LPJ_T0004918.1 MGP_LPJ_G0004225.1 mouse_genomes_project 5 155939699 155944962 - Gm43150 antisense antisense MGP_LPJ_T0001472.1 MGP_LPJ_G0001389.1 mouse_genomes_project 5 5828276 5839273 - TEC TEC MGP_LPJ_T0008193.1 MGP_LPJ_G0006678.1 mouse_genomes_project 5 76643872 76656246 + Gm32780 lincRNA lincRNA MGP_LPJ_T0074757.1 MGP_LPJ_G0030090.1 mouse_genomes_project 5 140637063 140637386 - MGP_LPJ_P0074757 protein_coding protein_coding MGP_LPJ_T0014934.1 MGP_LPJ_G0013025.1 mouse_genomes_project 5 55328703 55329508 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004823.1 MGP_LPJ_G0004159.1 mouse_genomes_project 5 120897069 120897818 - Gm10399 antisense antisense MGP_LPJ_T0004824.1 MGP_LPJ_G0004159.1 mouse_genomes_project 5 120897317 120897816 - Gm10399 antisense antisense MGP_LPJ_T0074585.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139225590 139342027 - MGP_LPJ_P0074585 Gtf2ird1 protein_coding protein_coding MGP_LPJ_T0074586.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139225590 139341567 - MGP_LPJ_P0074586 Gtf2ird1 protein_coding protein_coding MGP_LPJ_T0074587.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139225595 139341999 - MGP_LPJ_P0074587 Gtf2ird1 protein_coding protein_coding MGP_LPJ_T0074588.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139225597 139235132 - MGP_LPJ_P0074588 Gtf2ird1 protein_coding protein_coding MGP_LPJ_T0074589.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139225603 139342027 - MGP_LPJ_P0074589 Gtf2ird1 protein_coding protein_coding MGP_LPJ_T0074590.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139225613 139341895 - MGP_LPJ_P0074590 Gtf2ird1 protein_coding protein_coding MGP_LPJ_T0074591.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139225613 139341887 - MGP_LPJ_P0074591 Gtf2ird1 protein_coding protein_coding MGP_LPJ_T0074592.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139225613 139341887 - MGP_LPJ_P0074592 Gtf2ird1 protein_coding protein_coding MGP_LPJ_T0074593.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139225631 139341900 - MGP_LPJ_P0074593 Gtf2ird1 protein_coding protein_coding MGP_LPJ_T0074594.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139225720 139251855 - MGP_LPJ_P0074594 Gtf2ird1 protein_coding protein_coding MGP_LPJ_T0074595.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139226507 139341900 - MGP_LPJ_P0074595 Gtf2ird1 protein_coding protein_coding MGP_LPJ_T0074596.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139226507 139341887 - MGP_LPJ_P0074596 Gtf2ird1 protein_coding protein_coding MGP_LPJ_T0074597.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139226569 139342003 - MGP_LPJ_P0074597 Gtf2ird1 protein_coding protein_coding MGP_LPJ_T0074598.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139226588 139341897 - MGP_LPJ_P0074598 Gtf2ird1 protein_coding protein_coding MGP_LPJ_T0074599.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139228109 139230310 - Gtf2ird1 protein_coding retained_intron MGP_LPJ_T0074600.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139228172 139259533 - MGP_LPJ_P0074600 Gtf2ird1 protein_coding nonsense_mediated_decay MGP_LPJ_T0074601.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139231526 139247962 - Gtf2ird1 protein_coding retained_intron MGP_LPJ_T0074602.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139232456 139262920 - MGP_LPJ_P0074602 Gtf2ird1 protein_coding protein_coding MGP_LPJ_T0074603.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139234892 139262941 - MGP_LPJ_P0074603 Gtf2ird1 protein_coding nonsense_mediated_decay MGP_LPJ_T0074604.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139246358 139341588 - Gtf2ird1 protein_coding retained_intron MGP_LPJ_T0074605.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139257044 139269863 - MGP_LPJ_P0074605 Gtf2ird1 protein_coding nonsense_mediated_decay MGP_LPJ_T0074606.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139257044 139269863 - MGP_LPJ_P0074606 Gtf2ird1 protein_coding protein_coding MGP_LPJ_T0074607.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139257253 139258964 - Gtf2ird1 protein_coding retained_intron MGP_LPJ_T0074608.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139257256 139269863 - MGP_LPJ_P0074608 Gtf2ird1 protein_coding nonsense_mediated_decay MGP_LPJ_T0074609.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139258240 139269863 - MGP_LPJ_P0074609 Gtf2ird1 protein_coding protein_coding MGP_LPJ_T0074610.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139259281 139269767 - Gtf2ird1 protein_coding retained_intron MGP_LPJ_T0074611.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139259397 139276255 - Gtf2ird1 protein_coding retained_intron MGP_LPJ_T0074612.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139265332 139291548 - MGP_LPJ_P0074612 Gtf2ird1 protein_coding protein_coding MGP_LPJ_T0074613.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139276969 139341990 - Gtf2ird1 protein_coding retained_intron MGP_LPJ_T0074614.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139278862 139341985 - Gtf2ird1 protein_coding processed_transcript MGP_LPJ_T0074615.1 MGP_LPJ_G0030059.1 mouse_genomes_project 5 139285143 139341265 - MGP_LPJ_P0074615 Gtf2ird1 protein_coding protein_coding MGP_LPJ_T0101362.1 MGP_LPJ_G0039563.1 mouse_genomes_project 5 76813882 76814352 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0004810.1 MGP_LPJ_G0004150.1 mouse_genomes_project 5 118360662 118390271 + Hnf1aos1 antisense antisense MGP_LPJ_T0004812.1 MGP_LPJ_G0004150.1 mouse_genomes_project 5 118361775 118377692 + Hnf1aos1 antisense antisense MGP_LPJ_T0004813.1 MGP_LPJ_G0004150.1 mouse_genomes_project 5 118361798 118390464 + Hnf1aos1 antisense antisense MGP_LPJ_T0001662.1 MGP_LPJ_G0001575.1 mouse_genomes_project 5 65687768 65691757 - TEC TEC MGP_LPJ_T0073036.1 MGP_LPJ_G0029782.1 mouse_genomes_project 5 113182030 113230166 + MGP_LPJ_P0073036 Golga3 protein_coding protein_coding MGP_LPJ_T0073037.1 MGP_LPJ_G0029782.1 mouse_genomes_project 5 113182186 113192266 + Golga3 protein_coding retained_intron MGP_LPJ_T0073038.1 MGP_LPJ_G0029782.1 mouse_genomes_project 5 113182208 113190329 + MGP_LPJ_P0073038 Golga3 protein_coding protein_coding MGP_LPJ_T0073039.1 MGP_LPJ_G0029782.1 mouse_genomes_project 5 113182208 113226894 + MGP_LPJ_P0073039 Golga3 protein_coding protein_coding MGP_LPJ_T0073040.1 MGP_LPJ_G0029782.1 mouse_genomes_project 5 113182226 113194180 + Golga3 protein_coding retained_intron MGP_LPJ_T0075602.1 MGP_LPJ_G0030262.1 mouse_genomes_project 5 151121888 151139076 + MGP_LPJ_P0075602 Arpc1b protein_coding protein_coding MGP_LPJ_T0075603.1 MGP_LPJ_G0030262.1 mouse_genomes_project 5 151121931 151130644 + Arpc1b protein_coding processed_transcript MGP_LPJ_T0075604.1 MGP_LPJ_G0030262.1 mouse_genomes_project 5 151121985 151137619 + MGP_LPJ_P0075604 Arpc1b protein_coding protein_coding MGP_LPJ_T0075605.1 MGP_LPJ_G0030262.1 mouse_genomes_project 5 151121989 151130488 + MGP_LPJ_P0075605 Arpc1b protein_coding protein_coding MGP_LPJ_T0075606.1 MGP_LPJ_G0030262.1 mouse_genomes_project 5 151132235 151135343 + MGP_LPJ_P0075606 Arpc1b protein_coding protein_coding MGP_LPJ_T0075607.1 MGP_LPJ_G0030262.1 mouse_genomes_project 5 151132530 151134263 + Arpc1b protein_coding retained_intron MGP_LPJ_T0075608.1 MGP_LPJ_G0030262.1 mouse_genomes_project 5 151132530 151136577 + Arpc1b protein_coding processed_transcript MGP_LPJ_T0075609.1 MGP_LPJ_G0030262.1 mouse_genomes_project 5 151134447 151136973 + Arpc1b protein_coding retained_intron MGP_LPJ_T0075610.1 MGP_LPJ_G0030262.1 mouse_genomes_project 5 151135314 151140646 + MGP_LPJ_P0075610 Arpc1b protein_coding protein_coding MGP_LPJ_T0075611.1 MGP_LPJ_G0030262.1 mouse_genomes_project 5 151136865 151137619 + Arpc1b protein_coding retained_intron MGP_LPJ_T0074352.1 MGP_LPJ_G0030019.1 mouse_genomes_project 5 132076057 132098252 - MGP_LPJ_P0074352 Slc15a4 protein_coding protein_coding MGP_LPJ_T0074353.1 MGP_LPJ_G0030019.1 mouse_genomes_project 5 132076060 132098254 - MGP_LPJ_P0074353 Slc15a4 protein_coding nonsense_mediated_decay MGP_LPJ_T0074354.1 MGP_LPJ_G0030019.1 mouse_genomes_project 5 132076060 132098062 - MGP_LPJ_P0074354 Slc15a4 protein_coding nonsense_mediated_decay MGP_LPJ_T0074355.1 MGP_LPJ_G0030019.1 mouse_genomes_project 5 132077049 132085015 - MGP_LPJ_P0074355 Slc15a4 protein_coding protein_coding MGP_LPJ_T0074356.1 MGP_LPJ_G0030019.1 mouse_genomes_project 5 132082265 132114810 - MGP_LPJ_P0074356 Slc15a4 protein_coding nonsense_mediated_decay MGP_LPJ_T0074357.1 MGP_LPJ_G0030019.1 mouse_genomes_project 5 132084116 132084942 - Slc15a4 protein_coding processed_transcript MGP_LPJ_T0074358.1 MGP_LPJ_G0030019.1 mouse_genomes_project 5 132084116 132084942 - Slc15a4 protein_coding processed_transcript MGP_LPJ_T0074359.1 MGP_LPJ_G0030019.1 mouse_genomes_project 5 132084142 132089687 - MGP_LPJ_P0074359 Slc15a4 protein_coding protein_coding MGP_LPJ_T0074360.1 MGP_LPJ_G0030019.1 mouse_genomes_project 5 132084940 132097719 - Slc15a4 protein_coding processed_transcript MGP_LPJ_T0074361.1 MGP_LPJ_G0030019.1 mouse_genomes_project 5 132089128 132114827 - MGP_LPJ_P0074361 Slc15a4 protein_coding protein_coding MGP_LPJ_T0074362.1 MGP_LPJ_G0030019.1 mouse_genomes_project 5 132094785 132098217 - Slc15a4 protein_coding retained_intron MGP_LPJ_T0073219.1 MGP_LPJ_G0029817.1 mouse_genomes_project 5 116437059 116449380 + MGP_LPJ_P0073219 Tmem211 protein_coding protein_coding MGP_LPJ_T0070376.1 MGP_LPJ_G0029271.1 mouse_genomes_project 5 26684737 26723523 + MGP_LPJ_P0070376 Rbm33 protein_coding non_stop_decay MGP_LPJ_T0070377.1 MGP_LPJ_G0029271.1 mouse_genomes_project 5 26684793 26786792 + MGP_LPJ_P0070377 Rbm33 protein_coding protein_coding MGP_LPJ_T0070378.1 MGP_LPJ_G0029271.1 mouse_genomes_project 5 26684793 26789921 + MGP_LPJ_P0070378 Rbm33 protein_coding protein_coding MGP_LPJ_T0070379.1 MGP_LPJ_G0029271.1 mouse_genomes_project 5 26684818 26726403 + MGP_LPJ_P0070379 Rbm33 protein_coding protein_coding MGP_LPJ_T0070380.1 MGP_LPJ_G0029271.1 mouse_genomes_project 5 26762700 26784364 + MGP_LPJ_P0070380 Rbm33 protein_coding protein_coding MGP_LPJ_T0070381.1 MGP_LPJ_G0029271.1 mouse_genomes_project 5 26781347 26784716 + MGP_LPJ_P0070381 Rbm33 protein_coding protein_coding MGP_LPJ_T0075562.1 MGP_LPJ_G0030252.1 mouse_genomes_project 5 150201700 150300902 - MGP_LPJ_P0075562 Baiap2l1 protein_coding protein_coding MGP_LPJ_T0075563.1 MGP_LPJ_G0030252.1 mouse_genomes_project 5 150222250 150229166 - Baiap2l1 protein_coding processed_transcript MGP_LPJ_T0074694.1 MGP_LPJ_G0030076.1 mouse_genomes_project 5 140018006 140024892 - MGP_LPJ_P0074694 Vps37d protein_coding protein_coding MGP_LPJ_T0074695.1 MGP_LPJ_G0030076.1 mouse_genomes_project 5 140018009 140024892 - MGP_LPJ_P0074695 Vps37d protein_coding protein_coding MGP_LPJ_T0072552.1 MGP_LPJ_G0029674.1 mouse_genomes_project 5 100210669 100237446 + MGP_LPJ_P0072552 Fgf5 protein_coding protein_coding MGP_LPJ_T0072553.1 MGP_LPJ_G0029674.1 mouse_genomes_project 5 100210899 100235883 + MGP_LPJ_P0072553 Fgf5 protein_coding protein_coding MGP_LPJ_T0004651.1 MGP_LPJ_G0004029.1 mouse_genomes_project 5 349339 350787 - Gm42435 antisense antisense MGP_LPJ_T0004679.1 MGP_LPJ_G0004052.1 mouse_genomes_project 5 29235500 29240123 - Gm15461 antisense antisense MGP_LPJ_T0075064.1 MGP_LPJ_G0030146.1 mouse_genomes_project 5 143015202 143040951 + MGP_LPJ_P0075064 Tsc22d4 protein_coding protein_coding MGP_LPJ_T0075065.1 MGP_LPJ_G0030146.1 mouse_genomes_project 5 143015431 143023956 + Tsc22d4 protein_coding retained_intron MGP_LPJ_T0075066.1 MGP_LPJ_G0030146.1 mouse_genomes_project 5 143015468 143032811 + MGP_LPJ_P0075066 Tsc22d4 protein_coding protein_coding MGP_LPJ_T0075067.1 MGP_LPJ_G0030146.1 mouse_genomes_project 5 143022409 143030238 + Tsc22d4 protein_coding retained_intron MGP_LPJ_T0075068.1 MGP_LPJ_G0030146.1 mouse_genomes_project 5 143029484 143030888 + MGP_LPJ_P0075068 Tsc22d4 protein_coding protein_coding MGP_LPJ_T0075069.1 MGP_LPJ_G0030146.1 mouse_genomes_project 5 143029524 143030772 + MGP_LPJ_P0075069 Tsc22d4 protein_coding protein_coding MGP_LPJ_T0075070.1 MGP_LPJ_G0030146.1 mouse_genomes_project 5 143033101 143040845 + MGP_LPJ_P0075070 Tsc22d4 protein_coding protein_coding MGP_LPJ_T0075071.1 MGP_LPJ_G0030146.1 mouse_genomes_project 5 143033112 143040845 + MGP_LPJ_P0075071 Tsc22d4 protein_coding protein_coding MGP_LPJ_T0075072.1 MGP_LPJ_G0030146.1 mouse_genomes_project 5 143040142 143040735 + Tsc22d4 protein_coding processed_transcript MGP_LPJ_T0075510.1 MGP_LPJ_G0030240.1 mouse_genomes_project 5 149770428 149808259 + MGP_LPJ_P0075510 Eif2ak1 protein_coding protein_coding MGP_LPJ_T0075511.1 MGP_LPJ_G0030240.1 mouse_genomes_project 5 149770471 149784036 + Eif2ak1 protein_coding retained_intron MGP_LPJ_T0075512.1 MGP_LPJ_G0030240.1 mouse_genomes_project 5 149770587 149777826 + Eif2ak1 protein_coding retained_intron MGP_LPJ_T0015004.1 MGP_LPJ_G0013095.1 mouse_genomes_project 5 88310143 88311203 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008174.1 MGP_LPJ_G0006663.1 mouse_genomes_project 5 73040765 73042908 + 4933408A14Rik lincRNA lincRNA MGP_LPJ_T0072294.1 MGP_LPJ_G0029613.1 mouse_genomes_project 5 90128294 90157891 + Mob1b protein_coding retained_intron MGP_LPJ_T0072295.1 MGP_LPJ_G0029613.1 mouse_genomes_project 5 90128294 90175185 + MGP_LPJ_P0072295 Mob1b protein_coding protein_coding MGP_LPJ_T0072296.1 MGP_LPJ_G0029613.1 mouse_genomes_project 5 90128310 90168923 + MGP_LPJ_P0072296 Mob1b protein_coding protein_coding MGP_LPJ_T0072297.1 MGP_LPJ_G0029613.1 mouse_genomes_project 5 90128416 90158606 + Mob1b protein_coding retained_intron MGP_LPJ_T0001489.1 MGP_LPJ_G0001406.1 mouse_genomes_project 5 12231721 12235372 + TEC TEC MGP_LPJ_T0070473.1 MGP_LPJ_G0029290.1 mouse_genomes_project 5 28863670 28879946 + MGP_LPJ_P0070473 1700001C02Rik protein_coding protein_coding MGP_LPJ_T0070474.1 MGP_LPJ_G0029290.1 mouse_genomes_project 5 28863678 28883087 + MGP_LPJ_P0070474 1700001C02Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0070475.1 MGP_LPJ_G0029290.1 mouse_genomes_project 5 28863682 28883131 + MGP_LPJ_P0070475 1700001C02Rik protein_coding protein_coding MGP_LPJ_T0070476.1 MGP_LPJ_G0029290.1 mouse_genomes_project 5 28863707 28883110 + MGP_LPJ_P0070476 1700001C02Rik protein_coding protein_coding MGP_LPJ_T0008190.1 MGP_LPJ_G0006675.1 mouse_genomes_project 5 76334192 76340717 - Gm43100 lincRNA lincRNA MGP_LPJ_T0015016.1 MGP_LPJ_G0013107.1 mouse_genomes_project 5 90214731 90216361 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004792.1 MGP_LPJ_G0004136.1 mouse_genomes_project 5 113159095 113159731 - Gm43136 antisense antisense MGP_LPJ_T0014839.1 MGP_LPJ_G0012930.1 mouse_genomes_project 5 19953233 19953875 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014975.1 MGP_LPJ_G0013066.1 mouse_genomes_project 5 72564060 72564532 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099626.1 MGP_LPJ_G0037889.1 mouse_genomes_project 5 143768090 143768197 + Gm25525 snRNA snRNA MGP_LPJ_T0015080.1 MGP_LPJ_G0013171.1 mouse_genomes_project 5 113936363 113936861 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008251.1 MGP_LPJ_G0006724.1 mouse_genomes_project 5 104252413 104253977 + Gm29707 lincRNA lincRNA MGP_LPJ_T0008252.1 MGP_LPJ_G0006724.1 mouse_genomes_project 5 104253044 104253535 + Gm29707 lincRNA lincRNA MGP_LPJ_T0070183.1 MGP_LPJ_G0029230.1 mouse_genomes_project 5 21810211 21849209 - MGP_LPJ_P0070183 protein_coding unknown_likely_coding MGP_LPJ_T0070184.1 MGP_LPJ_G0029230.1 mouse_genomes_project 5 21810866 21818659 - protein_coding processed_transcript MGP_LPJ_T0070185.1 MGP_LPJ_G0029230.1 mouse_genomes_project 5 21811925 21833445 - MGP_LPJ_P0070185 protein_coding nonsense_mediated_decay MGP_LPJ_T0070186.1 MGP_LPJ_G0029230.1 mouse_genomes_project 5 21817924 21833482 - protein_coding processed_transcript MGP_LPJ_T0070187.1 MGP_LPJ_G0029230.1 mouse_genomes_project 5 21819060 21825648 - protein_coding processed_transcript MGP_LPJ_T0070188.1 MGP_LPJ_G0029230.1 mouse_genomes_project 5 21843413 21846339 - protein_coding retained_intron MGP_LPJ_T0075343.1 MGP_LPJ_G0030206.1 mouse_genomes_project 5 146334386 146366359 - MGP_LPJ_P0075343 Ttyh3 protein_coding protein_coding MGP_LPJ_T0075344.1 MGP_LPJ_G0030206.1 mouse_genomes_project 5 146336935 146340995 - MGP_LPJ_P0075344 Ttyh3 protein_coding protein_coding MGP_LPJ_T0075345.1 MGP_LPJ_G0030206.1 mouse_genomes_project 5 146344844 146345316 - Ttyh3 protein_coding retained_intron MGP_LPJ_T0075346.1 MGP_LPJ_G0030206.1 mouse_genomes_project 5 146345225 146351821 - Ttyh3 protein_coding retained_intron MGP_LPJ_T0075347.1 MGP_LPJ_G0030206.1 mouse_genomes_project 5 146366002 146366529 - Ttyh3 protein_coding processed_transcript MGP_LPJ_T0004788.1 MGP_LPJ_G0004132.1 mouse_genomes_project 5 110010896 110021971 - Gm42902 antisense antisense MGP_LPJ_T0010744.1 MGP_LPJ_G0008862.1 mouse_genomes_project 5 141156997 141157079 + Mir7035 miRNA miRNA MGP_LPJ_T0075719.1 MGP_LPJ_G0030291.1 mouse_genomes_project 5 153615355 153621247 + MGP_LPJ_P0075719 Pdx1 protein_coding protein_coding MGP_LPJ_T0072200.1 MGP_LPJ_G0029580.1 mouse_genomes_project 5 88425516 88445801 - MGP_LPJ_P0072200 Ugt2b5 protein_coding protein_coding MGP_LPJ_T0001643.1 MGP_LPJ_G0001557.1 mouse_genomes_project 5 57743290 57745087 + TEC TEC MGP_LPJ_T0001570.1 MGP_LPJ_G0001484.1 mouse_genomes_project 5 43817605 43820964 - TEC TEC MGP_LPJ_T0018094.1 MGP_LPJ_G0015515.1 mouse_genomes_project 5 52455371 52478961 - 5033403H07Rik processed_transcript lincRNA MGP_LPJ_T0018095.1 MGP_LPJ_G0015515.1 mouse_genomes_project 5 52455383 52476817 - 5033403H07Rik processed_transcript lincRNA MGP_LPJ_T0018096.1 MGP_LPJ_G0015515.1 mouse_genomes_project 5 52473949 52476868 - 5033403H07Rik processed_transcript retained_intron MGP_LPJ_T0073284.1 MGP_LPJ_G0029830.1 mouse_genomes_project 5 117273145 117298741 + MGP_LPJ_P0073284 Dao protein_coding protein_coding MGP_LPJ_T0073285.1 MGP_LPJ_G0029830.1 mouse_genomes_project 5 117273326 117298508 + MGP_LPJ_P0073285 Dao protein_coding protein_coding MGP_LPJ_T0073286.1 MGP_LPJ_G0029830.1 mouse_genomes_project 5 117274251 117298508 + MGP_LPJ_P0073286 Dao protein_coding protein_coding MGP_LPJ_T0073287.1 MGP_LPJ_G0029830.1 mouse_genomes_project 5 117281070 117288584 + MGP_LPJ_P0073287 Dao protein_coding protein_coding MGP_LPJ_T0073288.1 MGP_LPJ_G0029830.1 mouse_genomes_project 5 117290177 117293090 + Dao protein_coding retained_intron MGP_LPJ_T0075647.1 MGP_LPJ_G0030270.1 mouse_genomes_project 5 151247411 151263016 + MGP_LPJ_P0075647 Zfp655 protein_coding protein_coding MGP_LPJ_T0075648.1 MGP_LPJ_G0030270.1 mouse_genomes_project 5 151247443 151263015 + MGP_LPJ_P0075648 Zfp655 protein_coding protein_coding MGP_LPJ_T0075649.1 MGP_LPJ_G0030270.1 mouse_genomes_project 5 151247444 151253100 + MGP_LPJ_P0075649 Zfp655 protein_coding protein_coding MGP_LPJ_T0075650.1 MGP_LPJ_G0030270.1 mouse_genomes_project 5 151247445 151252970 + MGP_LPJ_P0075650 Zfp655 protein_coding protein_coding MGP_LPJ_T0075651.1 MGP_LPJ_G0030270.1 mouse_genomes_project 5 151249152 151252934 + MGP_LPJ_P0075651 Zfp655 protein_coding protein_coding MGP_LPJ_T0073710.1 MGP_LPJ_G0029911.1 mouse_genomes_project 5 124470411 124476311 - MGP_LPJ_P0073710 Cfap73 protein_coding protein_coding MGP_LPJ_T0001737.1 MGP_LPJ_G0001649.1 mouse_genomes_project 5 90943256 90945391 + TEC TEC MGP_LPJ_T0072576.1 MGP_LPJ_G0029681.1 mouse_genomes_project 5 102005025 102028658 - MGP_LPJ_P0072576 Hnrnpd protein_coding protein_coding MGP_LPJ_T0072577.1 MGP_LPJ_G0029681.1 mouse_genomes_project 5 102009672 102028657 - MGP_LPJ_P0072577 Hnrnpd protein_coding protein_coding MGP_LPJ_T0072578.1 MGP_LPJ_G0029681.1 mouse_genomes_project 5 102010072 102028637 - MGP_LPJ_P0072578 Hnrnpd protein_coding protein_coding MGP_LPJ_T0072579.1 MGP_LPJ_G0029681.1 mouse_genomes_project 5 102010076 102028655 - MGP_LPJ_P0072579 Hnrnpd protein_coding protein_coding MGP_LPJ_T0072580.1 MGP_LPJ_G0029681.1 mouse_genomes_project 5 102010077 102026352 - MGP_LPJ_P0072580 Hnrnpd protein_coding nonsense_mediated_decay MGP_LPJ_T0072581.1 MGP_LPJ_G0029681.1 mouse_genomes_project 5 102010225 102015249 - MGP_LPJ_P0072581 Hnrnpd protein_coding nonsense_mediated_decay MGP_LPJ_T0072582.1 MGP_LPJ_G0029681.1 mouse_genomes_project 5 102010242 102013825 - MGP_LPJ_P0072582 Hnrnpd protein_coding nonsense_mediated_decay MGP_LPJ_T0072583.1 MGP_LPJ_G0029681.1 mouse_genomes_project 5 102011357 102028344 - MGP_LPJ_P0072583 Hnrnpd protein_coding nonsense_mediated_decay MGP_LPJ_T0072584.1 MGP_LPJ_G0029681.1 mouse_genomes_project 5 102013817 102015462 - Hnrnpd protein_coding retained_intron MGP_LPJ_T0099617.1 MGP_LPJ_G0037880.1 mouse_genomes_project 5 127623327 127623496 + Gm23458 snRNA snRNA MGP_LPJ_T0001791.1 MGP_LPJ_G0001703.1 mouse_genomes_project 5 116295734 116296298 + TEC TEC MGP_LPJ_T0008322.1 MGP_LPJ_G0006767.1 mouse_genomes_project 5 117189863 117191444 - Gm42797 lincRNA lincRNA MGP_LPJ_T0001606.1 MGP_LPJ_G0001520.1 mouse_genomes_project 5 48510025 48510413 - TEC TEC MGP_LPJ_T0001793.1 MGP_LPJ_G0001705.1 mouse_genomes_project 5 116343165 116343546 + TEC TEC MGP_LPJ_T0001808.1 MGP_LPJ_G0001720.1 mouse_genomes_project 5 119974540 119975948 - TEC TEC MGP_LPJ_T0001857.1 MGP_LPJ_G0001768.1 mouse_genomes_project 5 130883017 130884000 + TEC TEC MGP_LPJ_T0014959.1 MGP_LPJ_G0013050.1 mouse_genomes_project 5 64226340 64227298 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001896.1 MGP_LPJ_G0001807.1 mouse_genomes_project 5 137291447 137296269 - TEC TEC MGP_LPJ_T0001790.1 MGP_LPJ_G0001702.1 mouse_genomes_project 5 115802504 115803805 + TEC TEC MGP_LPJ_T0073808.1 MGP_LPJ_G0029935.1 mouse_genomes_project 5 125590072 125640292 - MGP_LPJ_P0073808 Aldh2 protein_coding protein_coding MGP_LPJ_T0073809.1 MGP_LPJ_G0029935.1 mouse_genomes_project 5 125591738 125639949 - MGP_LPJ_P0073809 Aldh2 protein_coding unknown_likely_coding MGP_LPJ_T0073810.1 MGP_LPJ_G0029935.1 mouse_genomes_project 5 125591917 125595223 - Aldh2 protein_coding retained_intron MGP_LPJ_T0073811.1 MGP_LPJ_G0029935.1 mouse_genomes_project 5 125591918 125603702 - MGP_LPJ_P0073811 Aldh2 protein_coding protein_coding MGP_LPJ_T0073812.1 MGP_LPJ_G0029935.1 mouse_genomes_project 5 125591996 125596874 - MGP_LPJ_P0073812 Aldh2 protein_coding protein_coding MGP_LPJ_T0073813.1 MGP_LPJ_G0029935.1 mouse_genomes_project 5 125594352 125640048 - MGP_LPJ_P0073813 Aldh2 protein_coding protein_coding MGP_LPJ_T0073814.1 MGP_LPJ_G0029935.1 mouse_genomes_project 5 125595507 125599163 - Aldh2 protein_coding retained_intron MGP_LPJ_T0073815.1 MGP_LPJ_G0029935.1 mouse_genomes_project 5 125600492 125640050 - MGP_LPJ_P0073815 Aldh2 protein_coding protein_coding MGP_LPJ_T0072638.1 MGP_LPJ_G0029691.1 mouse_genomes_project 5 102799621 102843737 - MGP_LPJ_P0072638 Hpse protein_coding protein_coding MGP_LPJ_T0072639.1 MGP_LPJ_G0029691.1 mouse_genomes_project 5 102804722 102843726 - MGP_LPJ_P0072639 Hpse protein_coding protein_coding MGP_LPJ_T0075329.1 MGP_LPJ_G0030201.1 mouse_genomes_project 5 146014772 146065685 - MGP_LPJ_P0075329 Snx8 protein_coding protein_coding MGP_LPJ_T0075330.1 MGP_LPJ_G0030201.1 mouse_genomes_project 5 146014777 146036322 - MGP_LPJ_P0075330 Snx8 protein_coding nonsense_mediated_decay MGP_LPJ_T0075331.1 MGP_LPJ_G0030201.1 mouse_genomes_project 5 146028695 146029454 - Snx8 protein_coding retained_intron MGP_LPJ_T0075332.1 MGP_LPJ_G0030201.1 mouse_genomes_project 5 146029371 146043813 - MGP_LPJ_P0075332 Snx8 protein_coding protein_coding MGP_LPJ_T0075333.1 MGP_LPJ_G0030201.1 mouse_genomes_project 5 146029387 146065685 - MGP_LPJ_P0075333 Snx8 protein_coding protein_coding MGP_LPJ_T0098629.1 MGP_LPJ_G0036903.1 mouse_genomes_project 5 118966055 118966775 + Gm13840 sense_intronic sense_intronic MGP_LPJ_T0011615.1 MGP_LPJ_G0009733.1 mouse_genomes_project 5 102527015 102527194 + Gm27286 misc_RNA misc_RNA MGP_LPJ_T0073494.1 MGP_LPJ_G0029872.1 mouse_genomes_project 5 118924050 118930190 - MGP_LPJ_P0073494 Sirt4 protein_coding protein_coding MGP_LPJ_T0073495.1 MGP_LPJ_G0029872.1 mouse_genomes_project 5 118924050 118930616 - MGP_LPJ_P0073495 Sirt4 protein_coding protein_coding MGP_LPJ_T0073496.1 MGP_LPJ_G0029872.1 mouse_genomes_project 5 118924053 118925898 - Sirt4 protein_coding retained_intron MGP_LPJ_T0073497.1 MGP_LPJ_G0029872.1 mouse_genomes_project 5 118926111 118928742 - Sirt4 protein_coding retained_intron MGP_LPJ_T0073498.1 MGP_LPJ_G0029872.1 mouse_genomes_project 5 118926182 118930238 - Sirt4 protein_coding processed_transcript MGP_LPJ_T0073499.1 MGP_LPJ_G0029872.1 mouse_genomes_project 5 118928347 118930259 - Sirt4 protein_coding retained_intron MGP_LPJ_T0008166.1 MGP_LPJ_G0006657.1 mouse_genomes_project 5 64649888 64666762 - Gm3716 lincRNA lincRNA MGP_LPJ_T0008167.1 MGP_LPJ_G0006657.1 mouse_genomes_project 5 64651259 64659185 - Gm3716 lincRNA lincRNA MGP_LPJ_T0008219.1 MGP_LPJ_G0006700.1 mouse_genomes_project 5 94366768 94372017 - 4932430I15Rik lincRNA lincRNA MGP_LPJ_T0100831.1 MGP_LPJ_G0039094.1 mouse_genomes_project 5 58120860 58120994 + Gm22536 snoRNA snoRNA MGP_LPJ_T0014911.1 MGP_LPJ_G0013002.1 mouse_genomes_project 5 41542047 41542481 - processed_pseudogene processed_pseudogene MGP_LPJ_T0073304.1 MGP_LPJ_G0029834.1 mouse_genomes_project 5 117412722 117421699 + MGP_LPJ_P0073304 Ung protein_coding protein_coding MGP_LPJ_T0073305.1 MGP_LPJ_G0029834.1 mouse_genomes_project 5 117413565 117420715 + MGP_LPJ_P0073305 Ung protein_coding protein_coding MGP_LPJ_T0073306.1 MGP_LPJ_G0029834.1 mouse_genomes_project 5 117413565 117420717 + MGP_LPJ_P0073306 Ung protein_coding nonsense_mediated_decay MGP_LPJ_T0073307.1 MGP_LPJ_G0029834.1 mouse_genomes_project 5 117414344 117420642 + MGP_LPJ_P0073307 Ung protein_coding protein_coding MGP_LPJ_T0073308.1 MGP_LPJ_G0029834.1 mouse_genomes_project 5 117414416 117417517 + Ung protein_coding retained_intron MGP_LPJ_T0099558.1 MGP_LPJ_G0037821.1 mouse_genomes_project 5 21908635 21908790 - Gm22054 snRNA snRNA MGP_LPJ_T0008434.1 MGP_LPJ_G0006840.1 mouse_genomes_project 5 142943971 142949620 - Gm15498 lincRNA lincRNA MGP_LPJ_T0074767.1 MGP_LPJ_G0030092.1 mouse_genomes_project 5 140748001 140756978 - MGP_LPJ_P0074767 Tmem120a protein_coding protein_coding MGP_LPJ_T0074768.1 MGP_LPJ_G0030092.1 mouse_genomes_project 5 140748020 140749107 - Tmem120a protein_coding retained_intron MGP_LPJ_T0074769.1 MGP_LPJ_G0030092.1 mouse_genomes_project 5 140748054 140749753 - Tmem120a protein_coding processed_transcript MGP_LPJ_T0074770.1 MGP_LPJ_G0030092.1 mouse_genomes_project 5 140748771 140754929 - Tmem120a protein_coding retained_intron MGP_LPJ_T0074771.1 MGP_LPJ_G0030092.1 mouse_genomes_project 5 140749724 140756738 - MGP_LPJ_P0074771 Tmem120a protein_coding protein_coding MGP_LPJ_T0074968.1 MGP_LPJ_G0030128.1 mouse_genomes_project 5 142510325 142535522 - MGP_LPJ_P0074968 Slc12a9 protein_coding protein_coding MGP_LPJ_T0074969.1 MGP_LPJ_G0030128.1 mouse_genomes_project 5 142520625 142522140 - Slc12a9 protein_coding retained_intron MGP_LPJ_T0074970.1 MGP_LPJ_G0030128.1 mouse_genomes_project 5 142531487 142535522 - Slc12a9 protein_coding retained_intron MGP_LPJ_T0074971.1 MGP_LPJ_G0030128.1 mouse_genomes_project 5 142534199 142534935 - MGP_LPJ_P0074971 Slc12a9 protein_coding protein_coding MGP_LPJ_T0001718.1 MGP_LPJ_G0001630.1 mouse_genomes_project 5 74534391 74539721 - TEC TEC MGP_LPJ_T0070791.1 MGP_LPJ_G0029337.1 mouse_genomes_project 5 31314790 31337682 - protein_coding retained_intron MGP_LPJ_T0073934.1 MGP_LPJ_G0029954.1 mouse_genomes_project 5 126599532 126623092 + MGP_LPJ_P0073934 Anapc7 protein_coding protein_coding MGP_LPJ_T0073935.1 MGP_LPJ_G0029954.1 mouse_genomes_project 5 126600283 126623092 + MGP_LPJ_P0073935 Anapc7 protein_coding protein_coding MGP_LPJ_T0073936.1 MGP_LPJ_G0029954.1 mouse_genomes_project 5 126600320 126621614 + MGP_LPJ_P0073936 Anapc7 protein_coding protein_coding MGP_LPJ_T0073937.1 MGP_LPJ_G0029954.1 mouse_genomes_project 5 126600417 126622631 + MGP_LPJ_P0073937 Anapc7 protein_coding unknown_likely_coding MGP_LPJ_T0073938.1 MGP_LPJ_G0029954.1 mouse_genomes_project 5 126617553 126618665 + Anapc7 protein_coding retained_intron MGP_LPJ_T0073939.1 MGP_LPJ_G0029954.1 mouse_genomes_project 5 126618318 126619983 + Anapc7 protein_coding retained_intron MGP_LPJ_T0073940.1 MGP_LPJ_G0029954.1 mouse_genomes_project 5 126619554 126619962 + MGP_LPJ_P0073940 Anapc7 protein_coding protein_coding MGP_LPJ_T0001849.1 MGP_LPJ_G0001761.1 mouse_genomes_project 5 128322276 128323782 + TEC TEC MGP_LPJ_T0014949.1 MGP_LPJ_G0013040.1 mouse_genomes_project 5 60556007 60557799 + processed_pseudogene processed_pseudogene MGP_LPJ_T0071327.1 MGP_LPJ_G0029428.1 mouse_genomes_project 5 43099793 43213324 - MGP_LPJ_P0071327 Prom1 protein_coding protein_coding MGP_LPJ_T0071328.1 MGP_LPJ_G0029428.1 mouse_genomes_project 5 43099795 43111089 - MGP_LPJ_P0071328 Prom1 protein_coding protein_coding MGP_LPJ_T0071329.1 MGP_LPJ_G0029428.1 mouse_genomes_project 5 43099795 43213402 - MGP_LPJ_P0071329 Prom1 protein_coding protein_coding MGP_LPJ_T0071330.1 MGP_LPJ_G0029428.1 mouse_genomes_project 5 43099795 43210595 - MGP_LPJ_P0071330 Prom1 protein_coding protein_coding MGP_LPJ_T0071331.1 MGP_LPJ_G0029428.1 mouse_genomes_project 5 43099795 43213051 - MGP_LPJ_P0071331 Prom1 protein_coding protein_coding MGP_LPJ_T0071332.1 MGP_LPJ_G0029428.1 mouse_genomes_project 5 43099798 43206138 - MGP_LPJ_P0071332 Prom1 protein_coding protein_coding MGP_LPJ_T0071333.1 MGP_LPJ_G0029428.1 mouse_genomes_project 5 43099798 43206138 - MGP_LPJ_P0071333 Prom1 protein_coding protein_coding MGP_LPJ_T0071334.1 MGP_LPJ_G0029428.1 mouse_genomes_project 5 43107449 43210562 - MGP_LPJ_P0071334 Prom1 protein_coding protein_coding MGP_LPJ_T0071335.1 MGP_LPJ_G0029428.1 mouse_genomes_project 5 43107612 43206083 - MGP_LPJ_P0071335 Prom1 protein_coding protein_coding MGP_LPJ_T0071336.1 MGP_LPJ_G0029428.1 mouse_genomes_project 5 43107612 43206083 - MGP_LPJ_P0071336 Prom1 protein_coding protein_coding MGP_LPJ_T0071337.1 MGP_LPJ_G0029428.1 mouse_genomes_project 5 43107612 43206138 - MGP_LPJ_P0071337 Prom1 protein_coding protein_coding MGP_LPJ_T0071338.1 MGP_LPJ_G0029428.1 mouse_genomes_project 5 43118668 43141470 - Prom1 protein_coding retained_intron MGP_LPJ_T0071339.1 MGP_LPJ_G0029428.1 mouse_genomes_project 5 43133678 43154866 - MGP_LPJ_P0071339 Prom1 protein_coding nonsense_mediated_decay MGP_LPJ_T0071340.1 MGP_LPJ_G0029428.1 mouse_genomes_project 5 43138129 43153940 - Prom1 protein_coding retained_intron MGP_LPJ_T0071341.1 MGP_LPJ_G0029428.1 mouse_genomes_project 5 43153316 43213328 - Prom1 protein_coding retained_intron MGP_LPJ_T0071342.1 MGP_LPJ_G0029428.1 mouse_genomes_project 5 43156883 43177810 - Prom1 protein_coding processed_transcript MGP_LPJ_T0071343.1 MGP_LPJ_G0029428.1 mouse_genomes_project 5 43165355 43210556 - MGP_LPJ_P0071343 Prom1 protein_coding protein_coding MGP_LPJ_T0071344.1 MGP_LPJ_G0029428.1 mouse_genomes_project 5 43211024 43213328 - Prom1 protein_coding processed_transcript MGP_LPJ_T0073178.1 MGP_LPJ_G0029809.1 mouse_genomes_project 5 115528377 115536233 - MGP_LPJ_P0073178 Asphd2 protein_coding protein_coding MGP_LPJ_T0073179.1 MGP_LPJ_G0029809.1 mouse_genomes_project 5 115529467 115533759 - Asphd2 protein_coding processed_transcript MGP_LPJ_T0073180.1 MGP_LPJ_G0029809.1 mouse_genomes_project 5 115535518 115538044 - MGP_LPJ_P0073180 Asphd2 protein_coding protein_coding MGP_LPJ_T0073181.1 MGP_LPJ_G0029809.1 mouse_genomes_project 5 115535707 115538888 - MGP_LPJ_P0073181 Asphd2 protein_coding protein_coding MGP_LPJ_T0073182.1 MGP_LPJ_G0029809.1 mouse_genomes_project 5 115535795 115537978 - MGP_LPJ_P0073182 Asphd2 protein_coding protein_coding MGP_LPJ_T0073183.1 MGP_LPJ_G0029809.1 mouse_genomes_project 5 115535830 115538323 - MGP_LPJ_P0073183 Asphd2 protein_coding protein_coding MGP_LPJ_T0073184.1 MGP_LPJ_G0029809.1 mouse_genomes_project 5 115535900 115537950 - MGP_LPJ_P0073184 Asphd2 protein_coding protein_coding MGP_LPJ_T0070598.1 MGP_LPJ_G0029311.1 mouse_genomes_project 5 29576714 29577481 - MGP_LPJ_P0070598 Ucn protein_coding protein_coding MGP_LPJ_T0070599.1 MGP_LPJ_G0029311.1 mouse_genomes_project 5 29576714 29577481 - MGP_LPJ_P0070599 Ucn protein_coding protein_coding MGP_LPJ_T0075321.1 MGP_LPJ_G0030199.1 mouse_genomes_project 5 145995393 146012111 + MGP_LPJ_P0075321 Nudt1 protein_coding protein_coding MGP_LPJ_T0075323.1 MGP_LPJ_G0030199.1 mouse_genomes_project 5 146005581 146012616 + MGP_LPJ_P0075323 Nudt1 protein_coding protein_coding MGP_LPJ_T0075324.1 MGP_LPJ_G0030199.1 mouse_genomes_project 5 146005630 146012616 + MGP_LPJ_P0075324 Nudt1 protein_coding protein_coding MGP_LPJ_T0075325.1 MGP_LPJ_G0030199.1 mouse_genomes_project 5 146005675 146012420 + MGP_LPJ_P0075325 Nudt1 protein_coding protein_coding MGP_LPJ_T0075326.1 MGP_LPJ_G0030199.1 mouse_genomes_project 5 146006116 146012287 + MGP_LPJ_P0075326 Nudt1 protein_coding protein_coding MGP_LPJ_T0075327.1 MGP_LPJ_G0030199.1 mouse_genomes_project 5 146006145 146010175 + MGP_LPJ_P0075327 Nudt1 protein_coding protein_coding MGP_LPJ_T0075328.1 MGP_LPJ_G0030199.1 mouse_genomes_project 5 146009052 146010291 + Nudt1 protein_coding processed_transcript MGP_LPJ_T0010700.1 MGP_LPJ_G0008818.1 mouse_genomes_project 5 51558384 51558500 - Mir6417 miRNA miRNA MGP_LPJ_T0073477.1 MGP_LPJ_G0029867.1 mouse_genomes_project 5 118758498 118766441 - MGP_LPJ_P0073477 Gatc protein_coding protein_coding MGP_LPJ_T0001572.1 MGP_LPJ_G0001486.1 mouse_genomes_project 5 43896806 43899323 - TEC TEC MGP_LPJ_T0070842.1 MGP_LPJ_G0029346.1 mouse_genomes_project 5 32019537 32022780 - MGP_LPJ_P0070842 Nkx1-1 protein_coding protein_coding MGP_LPJ_T0001843.1 MGP_LPJ_G0001755.1 mouse_genomes_project 5 127328681 127330246 + TEC TEC MGP_LPJ_T0072733.1 MGP_LPJ_G0029709.1 mouse_genomes_project 5 106303883 106311377 - MGP_LPJ_P0072733 Gm17660 protein_coding protein_coding MGP_LPJ_T0072734.1 MGP_LPJ_G0029709.1 mouse_genomes_project 5 106303909 106311361 - MGP_LPJ_P0072734 Gm17660 protein_coding protein_coding MGP_LPJ_T0072735.1 MGP_LPJ_G0029709.1 mouse_genomes_project 5 106305067 106311377 - MGP_LPJ_P0072735 Gm17660 protein_coding protein_coding MGP_LPJ_T0075197.1 MGP_LPJ_G0030174.1 mouse_genomes_project 5 144170749 144192410 + MGP_LPJ_P0075197 A430033K04Rik protein_coding protein_coding MGP_LPJ_T0075198.1 MGP_LPJ_G0030174.1 mouse_genomes_project 5 144170766 144205133 + MGP_LPJ_P0075198 A430033K04Rik protein_coding protein_coding MGP_LPJ_T0075199.1 MGP_LPJ_G0030174.1 mouse_genomes_project 5 144170784 144201518 + MGP_LPJ_P0075199 A430033K04Rik protein_coding protein_coding MGP_LPJ_T0008234.1 MGP_LPJ_G0006712.1 mouse_genomes_project 5 101279904 101285889 + Gm43252 lincRNA lincRNA MGP_LPJ_T0001747.1 MGP_LPJ_G0001659.1 mouse_genomes_project 5 98695803 98697949 + TEC TEC MGP_LPJ_T0008377.1 MGP_LPJ_G0006804.1 mouse_genomes_project 5 128351371 128415682 + Gm34086 lincRNA lincRNA MGP_LPJ_T0001626.1 MGP_LPJ_G0001540.1 mouse_genomes_project 5 53422575 53428545 + TEC TEC MGP_LPJ_T0008256.1 MGP_LPJ_G0006728.1 mouse_genomes_project 5 106492952 106500342 - Gm42792 lincRNA lincRNA MGP_LPJ_T0008121.1 MGP_LPJ_G0006618.1 mouse_genomes_project 5 36834317 36836695 + Gm42505 lincRNA lincRNA MGP_LPJ_T0008451.1 MGP_LPJ_G0006854.1 mouse_genomes_project 5 152446777 152448316 - Gm43625 lincRNA lincRNA MGP_LPJ_T0008186.1 MGP_LPJ_G0006672.1 mouse_genomes_project 5 75655046 75699493 + Gm19583 lincRNA lincRNA MGP_LPJ_T0070908.1 MGP_LPJ_G0029356.1 mouse_genomes_project 5 32607400 32608981 + MGP_LPJ_P0070908 Gm1673 protein_coding protein_coding MGP_LPJ_T0070909.1 MGP_LPJ_G0029356.1 mouse_genomes_project 5 32607404 32608977 + Gm1673 protein_coding retained_intron MGP_LPJ_T0070910.1 MGP_LPJ_G0029356.1 mouse_genomes_project 5 32607437 32608977 + MGP_LPJ_P0070910 Gm1673 protein_coding protein_coding MGP_LPJ_T0070911.1 MGP_LPJ_G0029356.1 mouse_genomes_project 5 32607441 32608974 + MGP_LPJ_P0070911 Gm1673 protein_coding protein_coding MGP_LPJ_T0070912.1 MGP_LPJ_G0029356.1 mouse_genomes_project 5 32607477 32608978 + MGP_LPJ_P0070912 Gm1673 protein_coding nonsense_mediated_decay MGP_LPJ_T0070913.1 MGP_LPJ_G0029356.1 mouse_genomes_project 5 32607501 32608977 + MGP_LPJ_P0070913 Gm1673 protein_coding protein_coding MGP_LPJ_T0071084.1 MGP_LPJ_G0029383.1 mouse_genomes_project 5 34421233 34453366 - MGP_LPJ_P0071084 Sh3tc1 protein_coding protein_coding MGP_LPJ_T0071085.1 MGP_LPJ_G0029383.1 mouse_genomes_project 5 34421234 34448036 - MGP_LPJ_P0071085 Sh3tc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0071086.1 MGP_LPJ_G0029383.1 mouse_genomes_project 5 34421236 34440341 - MGP_LPJ_P0071086 Sh3tc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0071087.1 MGP_LPJ_G0029383.1 mouse_genomes_project 5 34421236 34464077 - MGP_LPJ_P0071087 Sh3tc1 protein_coding protein_coding MGP_LPJ_T0071088.1 MGP_LPJ_G0029383.1 mouse_genomes_project 5 34421238 34443328 - Sh3tc1 protein_coding retained_intron MGP_LPJ_T0071089.1 MGP_LPJ_G0029383.1 mouse_genomes_project 5 34421364 34448133 - MGP_LPJ_P0071089 Sh3tc1 protein_coding protein_coding MGP_LPJ_T0071090.1 MGP_LPJ_G0029383.1 mouse_genomes_project 5 34447157 34453102 - Sh3tc1 protein_coding processed_transcript MGP_LPJ_T0070091.1 MGP_LPJ_G0029213.1 mouse_genomes_project 5 19139012 19212738 + Gsap protein_coding retained_intron MGP_LPJ_T0070092.1 MGP_LPJ_G0029213.1 mouse_genomes_project 5 19139024 19245814 + MGP_LPJ_P0070092 Gsap protein_coding nonsense_mediated_decay MGP_LPJ_T0070093.1 MGP_LPJ_G0029213.1 mouse_genomes_project 5 19139046 19245836 + MGP_LPJ_P0070093 Gsap protein_coding protein_coding MGP_LPJ_T0070094.1 MGP_LPJ_G0029213.1 mouse_genomes_project 5 19139056 19143831 + Gsap protein_coding processed_transcript MGP_LPJ_T0070095.1 MGP_LPJ_G0029213.1 mouse_genomes_project 5 19139069 19204745 + MGP_LPJ_P0070095 Gsap protein_coding nonsense_mediated_decay MGP_LPJ_T0070096.1 MGP_LPJ_G0029213.1 mouse_genomes_project 5 19139070 19242747 + MGP_LPJ_P0070096 Gsap protein_coding protein_coding MGP_LPJ_T0070097.1 MGP_LPJ_G0029213.1 mouse_genomes_project 5 19139070 19242747 + MGP_LPJ_P0070097 Gsap protein_coding nonsense_mediated_decay MGP_LPJ_T0070098.1 MGP_LPJ_G0029213.1 mouse_genomes_project 5 19204113 19211256 + Gsap protein_coding retained_intron MGP_LPJ_T0070099.1 MGP_LPJ_G0029213.1 mouse_genomes_project 5 19243893 19270070 + MGP_LPJ_P0070099 Gsap protein_coding protein_coding MGP_LPJ_T0070100.1 MGP_LPJ_G0029213.1 mouse_genomes_project 5 19243973 19270071 + Gsap protein_coding processed_transcript MGP_LPJ_T0001917.1 MGP_LPJ_G0001827.1 mouse_genomes_project 5 145683742 145686288 - TEC TEC MGP_LPJ_T0014859.1 MGP_LPJ_G0012950.1 mouse_genomes_project 5 23639292 23639895 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008356.1 MGP_LPJ_G0006793.1 mouse_genomes_project 5 123586127 123588636 - 1700021F13Rik lincRNA lincRNA MGP_LPJ_T0008357.1 MGP_LPJ_G0006793.1 mouse_genomes_project 5 123586131 123588434 - 1700021F13Rik lincRNA lincRNA MGP_LPJ_T0015119.1 MGP_LPJ_G0013210.1 mouse_genomes_project 5 142505173 142505420 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008461.1 MGP_LPJ_G0006864.1 mouse_genomes_project 5 155232140 155239715 + 4930505K14Rik lincRNA lincRNA MGP_LPJ_T0004749.1 MGP_LPJ_G0004109.1 mouse_genomes_project 5 82772535 82779226 - Gm16054 antisense antisense MGP_LPJ_T0099565.1 MGP_LPJ_G0037828.1 mouse_genomes_project 5 32793306 32793409 + Gm25918 snRNA snRNA MGP_LPJ_T0001872.1 MGP_LPJ_G0001783.1 mouse_genomes_project 5 135293479 135293905 - TEC TEC MGP_LPJ_T0070304.1 MGP_LPJ_G0029252.1 mouse_genomes_project 5 22843268 22867985 + MGP_LPJ_P0070304 Nub1 protein_coding protein_coding MGP_LPJ_T0070305.1 MGP_LPJ_G0029252.1 mouse_genomes_project 5 22843560 22867987 + MGP_LPJ_P0070305 Nub1 protein_coding protein_coding MGP_LPJ_T0070306.1 MGP_LPJ_G0029252.1 mouse_genomes_project 5 22843723 22867985 + Nub1 protein_coding retained_intron MGP_LPJ_T0074750.1 MGP_LPJ_G0030089.1 mouse_genomes_project 5 140632214 140647204 + MGP_LPJ_P0074750 Rhbdd2 protein_coding protein_coding MGP_LPJ_T0074751.1 MGP_LPJ_G0030089.1 mouse_genomes_project 5 140632250 140647276 + MGP_LPJ_P0074751 Rhbdd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074752.1 MGP_LPJ_G0030089.1 mouse_genomes_project 5 140632300 140637612 + Rhbdd2 protein_coding processed_transcript MGP_LPJ_T0074753.1 MGP_LPJ_G0030089.1 mouse_genomes_project 5 140632312 140635298 + Rhbdd2 protein_coding retained_intron MGP_LPJ_T0074754.1 MGP_LPJ_G0030089.1 mouse_genomes_project 5 140632319 140636228 + Rhbdd2 protein_coding retained_intron MGP_LPJ_T0074755.1 MGP_LPJ_G0030089.1 mouse_genomes_project 5 140634784 140640287 + MGP_LPJ_P0074755 Rhbdd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074756.1 MGP_LPJ_G0030089.1 mouse_genomes_project 5 140636214 140645458 + Rhbdd2 protein_coding retained_intron MGP_LPJ_T0015071.1 MGP_LPJ_G0013162.1 mouse_genomes_project 5 111817547 111818265 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098615.1 MGP_LPJ_G0036889.1 mouse_genomes_project 5 2299633 2302249 - Gm43728 sense_intronic sense_intronic MGP_LPJ_T0001751.1 MGP_LPJ_G0001663.1 mouse_genomes_project 5 98862050 98862535 + TEC TEC MGP_LPJ_T0073139.1 MGP_LPJ_G0029799.1 mouse_genomes_project 5 114407725 114462879 + MGP_LPJ_P0073139 Pitpnb protein_coding protein_coding MGP_LPJ_T0073140.1 MGP_LPJ_G0029799.1 mouse_genomes_project 5 114407769 114462879 + MGP_LPJ_P0073140 Pitpnb protein_coding protein_coding MGP_LPJ_T0073141.1 MGP_LPJ_G0029799.1 mouse_genomes_project 5 114407776 114462885 + MGP_LPJ_P0073141 Pitpnb protein_coding unknown_likely_coding MGP_LPJ_T0073142.1 MGP_LPJ_G0029799.1 mouse_genomes_project 5 114425099 114457633 + Pitpnb protein_coding processed_transcript MGP_LPJ_T0073143.1 MGP_LPJ_G0029799.1 mouse_genomes_project 5 114454542 114458223 + Pitpnb protein_coding retained_intron MGP_LPJ_T0015001.1 MGP_LPJ_G0013092.1 mouse_genomes_project 5 86050010 86050677 - processed_pseudogene processed_pseudogene MGP_LPJ_T0072488.1 MGP_LPJ_G0029658.1 mouse_genomes_project 5 94625603 94629505 - MGP_LPJ_P0072488 Sowahb protein_coding protein_coding MGP_LPJ_T0008064.1 MGP_LPJ_G0006586.1 mouse_genomes_project 5 20394300 20398134 - Gm43657 lincRNA lincRNA MGP_LPJ_T0004703.1 MGP_LPJ_G0004072.1 mouse_genomes_project 5 42616995 42625264 - Gm15866 antisense antisense MGP_LPJ_T0004704.1 MGP_LPJ_G0004072.1 mouse_genomes_project 5 42624779 42677264 - Gm15866 antisense antisense MGP_LPJ_T0001823.1 MGP_LPJ_G0001735.1 mouse_genomes_project 5 124054868 124056015 + TEC TEC MGP_LPJ_T0010713.1 MGP_LPJ_G0008831.1 mouse_genomes_project 5 84558490 84558573 + Gm44303 miRNA miRNA MGP_LPJ_T0008436.1 MGP_LPJ_G0006842.1 mouse_genomes_project 5 145121120 145144032 + 4930500L23Rik lincRNA lincRNA MGP_LPJ_T0073278.1 MGP_LPJ_G0029829.1 mouse_genomes_project 5 117199029 117262135 - MGP_LPJ_P0073278 Ssh1 protein_coding protein_coding MGP_LPJ_T0073279.1 MGP_LPJ_G0029829.1 mouse_genomes_project 5 117201685 117262027 - MGP_LPJ_P0073279 Ssh1 protein_coding protein_coding MGP_LPJ_T0073280.1 MGP_LPJ_G0029829.1 mouse_genomes_project 5 117204093 117257990 - MGP_LPJ_P0073280 Ssh1 protein_coding protein_coding MGP_LPJ_T0073281.1 MGP_LPJ_G0029829.1 mouse_genomes_project 5 117224962 117262075 - MGP_LPJ_P0073281 Ssh1 protein_coding nonsense_mediated_decay MGP_LPJ_T0073282.1 MGP_LPJ_G0029829.1 mouse_genomes_project 5 117229241 117230398 - MGP_LPJ_P0073282 Ssh1 protein_coding protein_coding MGP_LPJ_T0073283.1 MGP_LPJ_G0029829.1 mouse_genomes_project 5 117230245 117262015 - Ssh1 protein_coding retained_intron MGP_LPJ_T0072817.1 MGP_LPJ_G0029733.1 mouse_genomes_project 5 109545076 109565770 + MGP_LPJ_P0072817 Cdc7 protein_coding protein_coding MGP_LPJ_T0072818.1 MGP_LPJ_G0029733.1 mouse_genomes_project 5 109545076 109565771 + MGP_LPJ_P0072818 Cdc7 protein_coding protein_coding MGP_LPJ_T0072819.1 MGP_LPJ_G0029733.1 mouse_genomes_project 5 109545135 109565771 + MGP_LPJ_P0072819 Cdc7 protein_coding protein_coding MGP_LPJ_T0072820.1 MGP_LPJ_G0029733.1 mouse_genomes_project 5 109545146 109565771 + Cdc7 protein_coding retained_intron MGP_LPJ_T0072821.1 MGP_LPJ_G0029733.1 mouse_genomes_project 5 109545315 109565770 + MGP_LPJ_P0072821 Cdc7 protein_coding protein_coding MGP_LPJ_T0072822.1 MGP_LPJ_G0029733.1 mouse_genomes_project 5 109545772 109564694 + MGP_LPJ_P0072822 Cdc7 protein_coding nonsense_mediated_decay MGP_LPJ_T0072823.1 MGP_LPJ_G0029733.1 mouse_genomes_project 5 109555310 109555957 + Cdc7 protein_coding processed_transcript MGP_LPJ_T0072824.1 MGP_LPJ_G0029733.1 mouse_genomes_project 5 109556002 109560681 + Cdc7 protein_coding retained_intron MGP_LPJ_T0001539.1 MGP_LPJ_G0001453.1 mouse_genomes_project 5 34094871 34096111 - TEC TEC MGP_LPJ_T0001468.1 MGP_LPJ_G0001385.1 mouse_genomes_project 5 4334202 4335746 - TEC TEC MGP_LPJ_T0099613.1 MGP_LPJ_G0037876.1 mouse_genomes_project 5 121604660 121604767 - Gm25343 snRNA snRNA MGP_LPJ_T0071743.1 MGP_LPJ_G0029492.1 mouse_genomes_project 5 67359892 67364807 - MGP_LPJ_P0071743 Phox2b protein_coding protein_coding MGP_LPJ_T0071744.1 MGP_LPJ_G0029492.1 mouse_genomes_project 5 67362549 67364563 - MGP_LPJ_P0071744 Phox2b protein_coding protein_coding MGP_LPJ_T0015102.1 MGP_LPJ_G0013193.1 mouse_genomes_project 5 126987017 126998473 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001827.1 MGP_LPJ_G0001739.1 mouse_genomes_project 5 125162984 125166252 - TEC TEC MGP_LPJ_T0073425.1 MGP_LPJ_G0029856.1 mouse_genomes_project 5 118403561 118499335 + MGP_LPJ_P0073425 Sppl3 protein_coding protein_coding MGP_LPJ_T0073426.1 MGP_LPJ_G0029856.1 mouse_genomes_project 5 118403570 118459699 + Sppl3 protein_coding processed_transcript MGP_LPJ_T0073427.1 MGP_LPJ_G0029856.1 mouse_genomes_project 5 118403918 118484213 + MGP_LPJ_P0073427 Sppl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0073428.1 MGP_LPJ_G0029856.1 mouse_genomes_project 5 118473688 118476194 + Sppl3 protein_coding retained_intron MGP_LPJ_T0073429.1 MGP_LPJ_G0029856.1 mouse_genomes_project 5 118495302 118498800 + Sppl3 protein_coding retained_intron MGP_LPJ_T0071307.1 MGP_LPJ_G0029424.1 mouse_genomes_project 5 42833672 42879462 - MGP_LPJ_P0071307 Fbxl5 protein_coding protein_coding MGP_LPJ_T0071308.1 MGP_LPJ_G0029424.1 mouse_genomes_project 5 42833673 42879428 - MGP_LPJ_P0071308 Fbxl5 protein_coding protein_coding MGP_LPJ_T0071309.1 MGP_LPJ_G0029424.1 mouse_genomes_project 5 42833681 42921867 - MGP_LPJ_P0071309 Fbxl5 protein_coding protein_coding MGP_LPJ_T0071310.1 MGP_LPJ_G0029424.1 mouse_genomes_project 5 42834356 42879367 - MGP_LPJ_P0071310 Fbxl5 protein_coding protein_coding MGP_LPJ_T0071311.1 MGP_LPJ_G0029424.1 mouse_genomes_project 5 42841293 42879421 - MGP_LPJ_P0071311 Fbxl5 protein_coding protein_coding MGP_LPJ_T0071312.1 MGP_LPJ_G0029424.1 mouse_genomes_project 5 42846592 42879440 - MGP_LPJ_P0071312 Fbxl5 protein_coding protein_coding MGP_LPJ_T0071313.1 MGP_LPJ_G0029424.1 mouse_genomes_project 5 42848572 42879456 - MGP_LPJ_P0071313 Fbxl5 protein_coding protein_coding MGP_LPJ_T0071314.1 MGP_LPJ_G0029424.1 mouse_genomes_project 5 42849377 42850572 - Fbxl5 protein_coding retained_intron MGP_LPJ_T0071315.1 MGP_LPJ_G0029424.1 mouse_genomes_project 5 42851719 42879421 - Fbxl5 protein_coding retained_intron MGP_LPJ_T0071316.1 MGP_LPJ_G0029424.1 mouse_genomes_project 5 42858107 42879437 - Fbxl5 protein_coding retained_intron MGP_LPJ_T0071317.1 MGP_LPJ_G0029424.1 mouse_genomes_project 5 42863895 42879419 - MGP_LPJ_P0071317 Fbxl5 protein_coding protein_coding MGP_LPJ_T0001554.1 MGP_LPJ_G0001468.1 mouse_genomes_project 5 42651400 42653506 + TEC TEC MGP_LPJ_T0004870.1 MGP_LPJ_G0004190.1 mouse_genomes_project 5 134858540 134861155 - Gm42469 antisense antisense MGP_LPJ_T0072298.1 MGP_LPJ_G0029614.1 mouse_genomes_project 5 90175960 90195764 + MGP_LPJ_P0072298 Dck protein_coding protein_coding MGP_LPJ_T0072299.1 MGP_LPJ_G0029614.1 mouse_genomes_project 5 90180276 90181095 + Dck protein_coding retained_intron MGP_LPJ_T0071580.1 MGP_LPJ_G0029470.1 mouse_genomes_project 5 65069346 65145304 + MGP_LPJ_P0071580 Fam114a1 protein_coding protein_coding MGP_LPJ_T0071581.1 MGP_LPJ_G0029470.1 mouse_genomes_project 5 65072447 65107048 + MGP_LPJ_P0071581 Fam114a1 protein_coding protein_coding MGP_LPJ_T0008384.1 MGP_LPJ_G0006810.1 mouse_genomes_project 5 130366013 130369968 - Gm42945 lincRNA lincRNA MGP_LPJ_T0008385.1 MGP_LPJ_G0006810.1 mouse_genomes_project 5 130366027 130373452 - Gm42945 lincRNA lincRNA MGP_LPJ_T0010686.1 MGP_LPJ_G0008804.1 mouse_genomes_project 5 20714754 20714851 + Gm44363 miRNA miRNA MGP_LPJ_T0098620.1 MGP_LPJ_G0036894.1 mouse_genomes_project 5 42978168 42979443 + Gm16014 sense_intronic sense_intronic MGP_LPJ_T0071360.1 MGP_LPJ_G0029431.1 mouse_genomes_project 5 44619705 44637317 - MGP_LPJ_P0071360 Qdpr protein_coding protein_coding MGP_LPJ_T0071361.1 MGP_LPJ_G0029431.1 mouse_genomes_project 5 44619722 44637484 - MGP_LPJ_P0071361 Qdpr protein_coding protein_coding MGP_LPJ_T0071362.1 MGP_LPJ_G0029431.1 mouse_genomes_project 5 44619822 44630094 - Qdpr protein_coding retained_intron MGP_LPJ_T0071363.1 MGP_LPJ_G0029431.1 mouse_genomes_project 5 44620177 44631755 - Qdpr protein_coding processed_transcript MGP_LPJ_T0071364.1 MGP_LPJ_G0029431.1 mouse_genomes_project 5 44625016 44637350 - MGP_LPJ_P0071364 Qdpr protein_coding protein_coding MGP_LPJ_T0071365.1 MGP_LPJ_G0029431.1 mouse_genomes_project 5 44630002 44637334 - MGP_LPJ_P0071365 Qdpr protein_coding protein_coding MGP_LPJ_T0100842.1 MGP_LPJ_G0039105.1 mouse_genomes_project 5 84748599 84748731 - Gm25765 snoRNA snoRNA MGP_LPJ_T0008469.1 MGP_LPJ_G0006870.1 mouse_genomes_project 5 155481503 155487256 + Gm15408 lincRNA lincRNA MGP_LPJ_T0072736.1 MGP_LPJ_G0029710.1 mouse_genomes_project 5 106312875 106351277 - MGP_LPJ_P0072736 Sparcl1 protein_coding protein_coding MGP_LPJ_T0072737.1 MGP_LPJ_G0029710.1 mouse_genomes_project 5 106326639 106350983 - MGP_LPJ_P0072737 Sparcl1 protein_coding protein_coding MGP_LPJ_T0018075.1 MGP_LPJ_G0015509.1 mouse_genomes_project 5 29371886 29376917 + Abhd1 processed_transcript processed_transcript MGP_LPJ_T0018076.1 MGP_LPJ_G0015509.1 mouse_genomes_project 5 29371886 29375229 + Abhd1 processed_transcript processed_transcript MGP_LPJ_T0018077.1 MGP_LPJ_G0015509.1 mouse_genomes_project 5 29371909 29375539 + Abhd1 processed_transcript processed_transcript MGP_LPJ_T0018078.1 MGP_LPJ_G0015509.1 mouse_genomes_project 5 29371909 29376915 + Abhd1 processed_transcript retained_intron MGP_LPJ_T0018079.1 MGP_LPJ_G0015509.1 mouse_genomes_project 5 29371912 29376525 + Abhd1 processed_transcript processed_transcript MGP_LPJ_T0018080.1 MGP_LPJ_G0015509.1 mouse_genomes_project 5 29371926 29376915 + Abhd1 processed_transcript processed_transcript MGP_LPJ_T0018081.1 MGP_LPJ_G0015509.1 mouse_genomes_project 5 29375199 29376010 + Abhd1 processed_transcript retained_intron MGP_LPJ_T0001720.1 MGP_LPJ_G0001632.1 mouse_genomes_project 5 74584171 74585184 - TEC TEC MGP_LPJ_T0001814.1 MGP_LPJ_G0001726.1 mouse_genomes_project 5 121657719 121658641 - TEC TEC MGP_LPJ_T0073641.1 MGP_LPJ_G0029896.1 mouse_genomes_project 5 121836412 121891764 - MGP_LPJ_P0073641 Rnft2 protein_coding protein_coding MGP_LPJ_T0073642.1 MGP_LPJ_G0029896.1 mouse_genomes_project 5 121836418 121892019 - MGP_LPJ_P0073642 Rnft2 protein_coding protein_coding MGP_LPJ_T0073643.1 MGP_LPJ_G0029896.1 mouse_genomes_project 5 121839307 121876037 - Rnft2 protein_coding retained_intron MGP_LPJ_T0073644.1 MGP_LPJ_G0029896.1 mouse_genomes_project 5 121839789 121846936 - MGP_LPJ_P0073644 Rnft2 protein_coding protein_coding MGP_LPJ_T0073645.1 MGP_LPJ_G0029896.1 mouse_genomes_project 5 121881043 121891897 - MGP_LPJ_P0073645 Rnft2 protein_coding protein_coding MGP_LPJ_T0073646.1 MGP_LPJ_G0029896.1 mouse_genomes_project 5 121883814 121889816 - Rnft2 protein_coding retained_intron MGP_LPJ_T0073647.1 MGP_LPJ_G0029896.1 mouse_genomes_project 5 121884392 121891895 - MGP_LPJ_P0073647 Rnft2 protein_coding protein_coding MGP_LPJ_T0074666.1 MGP_LPJ_G0030072.1 mouse_genomes_project 5 139947166 139947813 + MGP_LPJ_P0074666 Abhd11 protein_coding protein_coding MGP_LPJ_T0074667.1 MGP_LPJ_G0030072.1 mouse_genomes_project 5 139947209 139949924 + MGP_LPJ_P0074667 Abhd11 protein_coding protein_coding MGP_LPJ_T0074668.1 MGP_LPJ_G0030072.1 mouse_genomes_project 5 139947444 139949924 + MGP_LPJ_P0074668 Abhd11 protein_coding nonsense_mediated_decay MGP_LPJ_T0074669.1 MGP_LPJ_G0030072.1 mouse_genomes_project 5 139947459 139949924 + MGP_LPJ_P0074669 Abhd11 protein_coding nonsense_mediated_decay MGP_LPJ_T0074670.1 MGP_LPJ_G0030072.1 mouse_genomes_project 5 139947465 139949930 + MGP_LPJ_P0074670 Abhd11 protein_coding protein_coding MGP_LPJ_T0074671.1 MGP_LPJ_G0030072.1 mouse_genomes_project 5 139947726 139949730 + MGP_LPJ_P0074671 Abhd11 protein_coding nonsense_mediated_decay MGP_LPJ_T0008108.1 MGP_LPJ_G0006613.1 mouse_genomes_project 5 34083350 34092675 - E130018O15Rik lincRNA lincRNA MGP_LPJ_T0010740.1 MGP_LPJ_G0008858.1 mouse_genomes_project 5 139465961 139466000 + Mir7228 miRNA miRNA MGP_LPJ_T0004733.1 MGP_LPJ_G0004096.1 mouse_genomes_project 5 67919731 67924090 + Gm15478 antisense antisense MGP_LPJ_T0001519.1 MGP_LPJ_G0001435.1 mouse_genomes_project 5 29528234 29530537 + TEC TEC MGP_LPJ_T0001520.1 MGP_LPJ_G0001435.1 mouse_genomes_project 5 29528236 29530537 + TEC TEC MGP_LPJ_T0073920.1 MGP_LPJ_G0029951.1 mouse_genomes_project 5 126542637 126550415 - MGP_LPJ_P0073920 Fam216a protein_coding protein_coding MGP_LPJ_T0004794.1 MGP_LPJ_G0004138.1 mouse_genomes_project 5 113268325 113282350 + Gm15788 antisense antisense MGP_LPJ_T0004795.1 MGP_LPJ_G0004138.1 mouse_genomes_project 5 113268325 113282040 + Gm15788 antisense antisense MGP_LPJ_T0069975.1 MGP_LPJ_G0029194.1 mouse_genomes_project 5 6232534 6320219 + MGP_LPJ_P0069975 Tmem243 protein_coding nonsense_mediated_decay MGP_LPJ_T0069976.1 MGP_LPJ_G0029194.1 mouse_genomes_project 5 6232650 6265521 + MGP_LPJ_P0069976 Tmem243 protein_coding protein_coding MGP_LPJ_T0069995.1 MGP_LPJ_G0029194.1 mouse_genomes_project 5 6317871 6324598 + Tmem243 protein_coding processed_transcript MGP_LPJ_T0072475.1 MGP_LPJ_G0029656.1 mouse_genomes_project 5 94160463 94166990 - Ccdc158 protein_coding retained_intron MGP_LPJ_T0072476.1 MGP_LPJ_G0029656.1 mouse_genomes_project 5 94160762 94226796 - MGP_LPJ_P0072476 Ccdc158 protein_coding protein_coding MGP_LPJ_T0072477.1 MGP_LPJ_G0029656.1 mouse_genomes_project 5 94203251 94226936 - MGP_LPJ_P0072477 Ccdc158 protein_coding protein_coding MGP_LPJ_T0072478.1 MGP_LPJ_G0029656.1 mouse_genomes_project 5 94203251 94226942 - MGP_LPJ_P0072478 Ccdc158 protein_coding protein_coding MGP_LPJ_T0071762.1 MGP_LPJ_G0029495.1 mouse_genomes_project 5 67656041 67696505 - MGP_LPJ_P0071762 Bend4 protein_coding protein_coding MGP_LPJ_T0071763.1 MGP_LPJ_G0029495.1 mouse_genomes_project 5 67656042 67696323 - MGP_LPJ_P0071763 Bend4 protein_coding nonsense_mediated_decay MGP_LPJ_T0071764.1 MGP_LPJ_G0029495.1 mouse_genomes_project 5 67656042 67696323 - MGP_LPJ_P0071764 Bend4 protein_coding nonsense_mediated_decay MGP_LPJ_T0071765.1 MGP_LPJ_G0029495.1 mouse_genomes_project 5 67656042 67696036 - MGP_LPJ_P0071765 Bend4 protein_coding protein_coding MGP_LPJ_T0071766.1 MGP_LPJ_G0029495.1 mouse_genomes_project 5 67656042 67697016 - MGP_LPJ_P0071766 Bend4 protein_coding protein_coding MGP_LPJ_T0099620.1 MGP_LPJ_G0037883.1 mouse_genomes_project 5 130820686 130820793 - Gm23151 snRNA snRNA MGP_LPJ_T0008122.1 MGP_LPJ_G0006619.1 mouse_genomes_project 5 37204577 37209392 + 4930487D11Rik lincRNA lincRNA MGP_LPJ_T0001560.1 MGP_LPJ_G0001474.1 mouse_genomes_project 5 43217218 43218909 + TEC TEC MGP_LPJ_T0099582.1 MGP_LPJ_G0037845.1 mouse_genomes_project 5 70873308 70873415 - Gm26072 snRNA snRNA MGP_LPJ_T0072253.1 MGP_LPJ_G0029595.1 mouse_genomes_project 5 89265490 89275861 + MGP_LPJ_P0072253 Odam protein_coding protein_coding MGP_LPJ_T0072254.1 MGP_LPJ_G0029595.1 mouse_genomes_project 5 89266156 89274432 + MGP_LPJ_P0072254 Odam protein_coding protein_coding MGP_LPJ_T0075263.1 MGP_LPJ_G0030184.1 mouse_genomes_project 5 144938289 144940303 + Cyp2w1 protein_coding retained_intron MGP_LPJ_T0075264.1 MGP_LPJ_G0030184.1 mouse_genomes_project 5 144938289 144942714 + MGP_LPJ_P0075264 Cyp2w1 protein_coding protein_coding MGP_LPJ_T0075265.1 MGP_LPJ_G0030184.1 mouse_genomes_project 5 144940256 144942348 + MGP_LPJ_P0075265 Cyp2w1 protein_coding protein_coding MGP_LPJ_T0004846.1 MGP_LPJ_G0004175.1 mouse_genomes_project 5 127204457 127213623 + A930024E05Rik antisense antisense MGP_LPJ_T0070289.1 MGP_LPJ_G0029250.1 mouse_genomes_project 5 22732001 22739497 + MGP_LPJ_P0070289 Chpf2 protein_coding protein_coding MGP_LPJ_T0070290.1 MGP_LPJ_G0029250.1 mouse_genomes_project 5 22732002 22734274 + Chpf2 protein_coding processed_transcript MGP_LPJ_T0070291.1 MGP_LPJ_G0029250.1 mouse_genomes_project 5 22732010 22737585 + MGP_LPJ_P0070291 Chpf2 protein_coding protein_coding MGP_LPJ_T0070292.1 MGP_LPJ_G0029250.1 mouse_genomes_project 5 22732032 22733509 + Chpf2 protein_coding processed_transcript MGP_LPJ_T0070293.1 MGP_LPJ_G0029250.1 mouse_genomes_project 5 22732085 22736321 + MGP_LPJ_P0070293 Chpf2 protein_coding protein_coding MGP_LPJ_T0070297.1 MGP_LPJ_G0029250.1 mouse_genomes_project 5 22738588 22739658 + Chpf2 protein_coding processed_transcript MGP_LPJ_T0072383.1 MGP_LPJ_G0029640.1 mouse_genomes_project 5 93465324 93480225 - Rchy1 protein_coding processed_transcript MGP_LPJ_T0072384.1 MGP_LPJ_G0029640.1 mouse_genomes_project 5 93465324 93480737 - MGP_LPJ_P0072384 Rchy1 protein_coding protein_coding MGP_LPJ_T0072385.1 MGP_LPJ_G0029640.1 mouse_genomes_project 5 93465421 93480404 - MGP_LPJ_P0072385 Rchy1 protein_coding protein_coding MGP_LPJ_T0072386.1 MGP_LPJ_G0029640.1 mouse_genomes_project 5 93468651 93470552 - Rchy1 protein_coding retained_intron MGP_LPJ_T0072387.1 MGP_LPJ_G0029640.1 mouse_genomes_project 5 93479351 93480395 - Rchy1 protein_coding retained_intron MGP_LPJ_T0071883.1 MGP_LPJ_G0029522.1 mouse_genomes_project 5 73435053 73489345 - MGP_LPJ_P0071883 Fryl protein_coding protein_coding MGP_LPJ_T0071884.1 MGP_LPJ_G0029522.1 mouse_genomes_project 5 73435388 73452863 - MGP_LPJ_P0071884 Fryl protein_coding protein_coding MGP_LPJ_T0071885.1 MGP_LPJ_G0029522.1 mouse_genomes_project 5 73435399 73460747 - Fryl protein_coding processed_transcript MGP_LPJ_T0071886.1 MGP_LPJ_G0029522.1 mouse_genomes_project 5 73436260 73489747 - Fryl protein_coding retained_intron MGP_LPJ_T0071887.1 MGP_LPJ_G0029522.1 mouse_genomes_project 5 73436273 73572585 - MGP_LPJ_P0071887 Fryl protein_coding protein_coding MGP_LPJ_T0071888.1 MGP_LPJ_G0029522.1 mouse_genomes_project 5 73437210 73576564 - MGP_LPJ_P0071888 Fryl protein_coding protein_coding MGP_LPJ_T0071889.1 MGP_LPJ_G0029522.1 mouse_genomes_project 5 73455245 73507849 - MGP_LPJ_P0071889 Fryl protein_coding protein_coding MGP_LPJ_T0071890.1 MGP_LPJ_G0029522.1 mouse_genomes_project 5 73461264 73464258 - Fryl protein_coding retained_intron MGP_LPJ_T0071891.1 MGP_LPJ_G0029522.1 mouse_genomes_project 5 73461367 73502718 - Fryl protein_coding processed_transcript MGP_LPJ_T0071892.1 MGP_LPJ_G0029522.1 mouse_genomes_project 5 73468691 73469622 - Fryl protein_coding retained_intron MGP_LPJ_T0071893.1 MGP_LPJ_G0029522.1 mouse_genomes_project 5 73481083 73481963 - Fryl protein_coding retained_intron MGP_LPJ_T0071894.1 MGP_LPJ_G0029522.1 mouse_genomes_project 5 73482153 73489469 - MGP_LPJ_P0071894 Fryl protein_coding protein_coding MGP_LPJ_T0071895.1 MGP_LPJ_G0029522.1 mouse_genomes_project 5 73491732 73494847 - Fryl protein_coding retained_intron MGP_LPJ_T0071896.1 MGP_LPJ_G0029522.1 mouse_genomes_project 5 73516773 73517767 - MGP_LPJ_P0071896 Fryl protein_coding protein_coding MGP_LPJ_T0071897.1 MGP_LPJ_G0029522.1 mouse_genomes_project 5 73518901 73594017 - Fryl protein_coding retained_intron MGP_LPJ_T0071898.1 MGP_LPJ_G0029522.1 mouse_genomes_project 5 73531383 73542643 - MGP_LPJ_P0071898 Fryl protein_coding protein_coding MGP_LPJ_T0071899.1 MGP_LPJ_G0029522.1 mouse_genomes_project 5 73541128 73545053 - MGP_LPJ_P0071899 Fryl protein_coding protein_coding MGP_LPJ_T0071900.1 MGP_LPJ_G0029522.1 mouse_genomes_project 5 73542060 73685527 - Fryl protein_coding retained_intron MGP_LPJ_T0071901.1 MGP_LPJ_G0029522.1 mouse_genomes_project 5 73572486 73619718 - MGP_LPJ_P0071901 Fryl protein_coding protein_coding MGP_LPJ_T0071902.1 MGP_LPJ_G0029522.1 mouse_genomes_project 5 73621642 73685691 - Fryl protein_coding retained_intron MGP_LPJ_T0070592.1 MGP_LPJ_G0029309.1 mouse_genomes_project 5 29542394 29548795 + MGP_LPJ_P0070592 Dnajc5g protein_coding nonsense_mediated_decay MGP_LPJ_T0070593.1 MGP_LPJ_G0029309.1 mouse_genomes_project 5 29545115 29548550 + MGP_LPJ_P0070593 Dnajc5g protein_coding protein_coding MGP_LPJ_T0070594.1 MGP_LPJ_G0029309.1 mouse_genomes_project 5 29545125 29548654 + MGP_LPJ_P0070594 Dnajc5g protein_coding nonsense_mediated_decay MGP_LPJ_T0070595.1 MGP_LPJ_G0029309.1 mouse_genomes_project 5 29545127 29549337 + MGP_LPJ_P0070595 Dnajc5g protein_coding protein_coding MGP_LPJ_T0014872.1 MGP_LPJ_G0012963.1 mouse_genomes_project 5 26340518 26341814 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001864.1 MGP_LPJ_G0001775.1 mouse_genomes_project 5 133137860 133139234 - TEC TEC MGP_LPJ_T0099553.1 MGP_LPJ_G0037816.1 mouse_genomes_project 5 17408732 17408835 - Gm25335 snRNA snRNA MGP_LPJ_T0071848.1 MGP_LPJ_G0029514.1 mouse_genomes_project 5 72998972 73039093 - MGP_LPJ_P0071848 Cnga1 protein_coding protein_coding MGP_LPJ_T0071849.1 MGP_LPJ_G0029514.1 mouse_genomes_project 5 72998972 73014415 - MGP_LPJ_P0071849 Cnga1 protein_coding protein_coding MGP_LPJ_T0071850.1 MGP_LPJ_G0029514.1 mouse_genomes_project 5 72999391 73033617 - MGP_LPJ_P0071850 Cnga1 protein_coding protein_coding MGP_LPJ_T0071851.1 MGP_LPJ_G0029514.1 mouse_genomes_project 5 73010394 73033622 - MGP_LPJ_P0071851 Cnga1 protein_coding protein_coding MGP_LPJ_T0071852.1 MGP_LPJ_G0029514.1 mouse_genomes_project 5 73014289 73026836 - MGP_LPJ_P0071852 Cnga1 protein_coding protein_coding MGP_LPJ_T0071853.1 MGP_LPJ_G0029514.1 mouse_genomes_project 5 73038627 73040631 - Cnga1 protein_coding retained_intron MGP_LPJ_T0098632.1 MGP_LPJ_G0036906.1 mouse_genomes_project 5 133320058 133321068 - Gm42871 sense_intronic sense_intronic MGP_LPJ_T0008239.1 MGP_LPJ_G0006716.1 mouse_genomes_project 5 101989915 102000183 + lincRNA lincRNA MGP_LPJ_T0001889.1 MGP_LPJ_G0001800.1 mouse_genomes_project 5 136805893 136808128 - TEC TEC MGP_LPJ_T0073241.1 MGP_LPJ_G0029822.1 mouse_genomes_project 5 116935904 116970642 - MGP_LPJ_P0073241 1700069L16Rik protein_coding protein_coding MGP_LPJ_T0073242.1 MGP_LPJ_G0029822.1 mouse_genomes_project 5 116943766 116949133 - 1700069L16Rik protein_coding processed_transcript MGP_LPJ_T0073243.1 MGP_LPJ_G0029822.1 mouse_genomes_project 5 116948392 116970619 - MGP_LPJ_P0073243 1700069L16Rik protein_coding protein_coding MGP_LPJ_T0014961.1 MGP_LPJ_G0013052.1 mouse_genomes_project 5 64226341 64227296 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001585.1 MGP_LPJ_G0001499.1 mouse_genomes_project 5 47591572 47592983 + TEC TEC MGP_LPJ_T0015086.1 MGP_LPJ_G0013177.1 mouse_genomes_project 5 118193337 118193913 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099605.1 MGP_LPJ_G0037868.1 mouse_genomes_project 5 109217209 109217331 + Gm24191 snRNA snRNA MGP_LPJ_T0004809.1 MGP_LPJ_G0004149.1 mouse_genomes_project 5 118297140 118304937 - Gm13822 antisense antisense MGP_LPJ_T0001686.1 MGP_LPJ_G0001599.1 mouse_genomes_project 5 66964396 66965965 + TEC TEC MGP_LPJ_T0014791.1 MGP_LPJ_G0012882.1 mouse_genomes_project 5 263323 263494 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015030.1 MGP_LPJ_G0013121.1 mouse_genomes_project 5 100025939 100031280 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008221.1 MGP_LPJ_G0006702.1 mouse_genomes_project 5 98794952 98806786 + Gm42601 lincRNA lincRNA MGP_LPJ_T0070536.1 MGP_LPJ_G0029300.1 mouse_genomes_project 5 29336026 29343924 + MGP_LPJ_P0070536 Emilin1 protein_coding protein_coding MGP_LPJ_T0070537.1 MGP_LPJ_G0029300.1 mouse_genomes_project 5 29336367 29343512 + Emilin1 protein_coding retained_intron MGP_LPJ_T0070538.1 MGP_LPJ_G0029300.1 mouse_genomes_project 5 29342567 29343696 + Emilin1 protein_coding retained_intron MGP_LPJ_T0011840.1 MGP_LPJ_G0009941.1 mouse_genomes_project 5 72600592 72698202 + MGP_LPJ_P0011840 Atp10d polymorphic_pseudogene polymorphic_pseudogene MGP_LPJ_T0011841.1 MGP_LPJ_G0009941.1 mouse_genomes_project 5 72600592 72627639 + MGP_LPJ_P0011841 Atp10d polymorphic_pseudogene protein_coding MGP_LPJ_T0011842.1 MGP_LPJ_G0009941.1 mouse_genomes_project 5 72600616 72626775 + Atp10d polymorphic_pseudogene retained_intron MGP_LPJ_T0011843.1 MGP_LPJ_G0009941.1 mouse_genomes_project 5 72664878 72698202 + Atp10d polymorphic_pseudogene processed_transcript MGP_LPJ_T0011844.1 MGP_LPJ_G0009941.1 mouse_genomes_project 5 72680278 72698188 + MGP_LPJ_P0011844 Atp10d polymorphic_pseudogene protein_coding MGP_LPJ_T0011845.1 MGP_LPJ_G0009941.1 mouse_genomes_project 5 72680278 72698189 + Atp10d polymorphic_pseudogene processed_transcript MGP_LPJ_T0008274.1 MGP_LPJ_G0006740.1 mouse_genomes_project 5 109639582 109648148 + Gm43419 lincRNA lincRNA MGP_LPJ_T0101557.1 MGP_LPJ_G0039661.1 mouse_genomes_project 5 74871863 74875023 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0008324.1 MGP_LPJ_G0006769.1 mouse_genomes_project 5 118726420 118744239 + Gm13830 lincRNA lincRNA MGP_LPJ_T0008325.1 MGP_LPJ_G0006769.1 mouse_genomes_project 5 118726436 118727599 + Gm13830 lincRNA lincRNA MGP_LPJ_T0008326.1 MGP_LPJ_G0006769.1 mouse_genomes_project 5 118726437 118742623 + Gm13830 lincRNA lincRNA MGP_LPJ_T0008327.1 MGP_LPJ_G0006769.1 mouse_genomes_project 5 118726447 118727632 + Gm13830 lincRNA lincRNA MGP_LPJ_T0008328.1 MGP_LPJ_G0006769.1 mouse_genomes_project 5 118726507 118727037 + Gm13830 lincRNA lincRNA MGP_LPJ_T0001844.1 MGP_LPJ_G0001756.1 mouse_genomes_project 5 127663892 127666040 + TEC TEC MGP_LPJ_T0069819.1 MGP_LPJ_G0029171.1 mouse_genomes_project 5 820540 851916 + Akap9 protein_coding retained_intron MGP_LPJ_T0069820.1 MGP_LPJ_G0029171.1 mouse_genomes_project 5 820664 858111 + MGP_LPJ_P0069820 Akap9 protein_coding protein_coding MGP_LPJ_T0069821.1 MGP_LPJ_G0029171.1 mouse_genomes_project 5 820760 846076 + Akap9 protein_coding retained_intron MGP_LPJ_T0069822.1 MGP_LPJ_G0029171.1 mouse_genomes_project 5 820760 979662 + MGP_LPJ_P0069822 Akap9 protein_coding protein_coding MGP_LPJ_T0069823.1 MGP_LPJ_G0029171.1 mouse_genomes_project 5 848390 854806 + Akap9 protein_coding processed_transcript MGP_LPJ_T0069824.1 MGP_LPJ_G0029171.1 mouse_genomes_project 5 848401 848982 + Akap9 protein_coding retained_intron MGP_LPJ_T0069825.1 MGP_LPJ_G0029171.1 mouse_genomes_project 5 851865 854862 + Akap9 protein_coding retained_intron MGP_LPJ_T0069826.1 MGP_LPJ_G0029171.1 mouse_genomes_project 5 869333 878745 + Akap9 protein_coding retained_intron MGP_LPJ_T0069827.1 MGP_LPJ_G0029171.1 mouse_genomes_project 5 872975 873891 + MGP_LPJ_P0069827 Akap9 protein_coding protein_coding MGP_LPJ_T0069828.1 MGP_LPJ_G0029171.1 mouse_genomes_project 5 928757 930920 + Akap9 protein_coding retained_intron MGP_LPJ_T0069829.1 MGP_LPJ_G0029171.1 mouse_genomes_project 5 952202 953878 + Akap9 protein_coding retained_intron MGP_LPJ_T0069830.1 MGP_LPJ_G0029171.1 mouse_genomes_project 5 957637 958640 + MGP_LPJ_P0069830 Akap9 protein_coding protein_coding MGP_LPJ_T0069831.1 MGP_LPJ_G0029171.1 mouse_genomes_project 5 957759 958238 + Akap9 protein_coding retained_intron MGP_LPJ_T0069832.1 MGP_LPJ_G0029171.1 mouse_genomes_project 5 958559 968811 + MGP_LPJ_P0069832 Akap9 protein_coding nonsense_mediated_decay MGP_LPJ_T0069833.1 MGP_LPJ_G0029171.1 mouse_genomes_project 5 960748 961222 + Akap9 protein_coding retained_intron MGP_LPJ_T0074254.1 MGP_LPJ_G0030000.1 mouse_genomes_project 5 128856531 128894072 - MGP_LPJ_P0074254 Rilpl1 protein_coding protein_coding MGP_LPJ_T0074255.1 MGP_LPJ_G0030000.1 mouse_genomes_project 5 128856988 128867234 - MGP_LPJ_P0074255 Rilpl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0074256.1 MGP_LPJ_G0030000.1 mouse_genomes_project 5 128857103 128877927 - MGP_LPJ_P0074256 Rilpl1 protein_coding protein_coding MGP_LPJ_T0074257.1 MGP_LPJ_G0030000.1 mouse_genomes_project 5 128857115 128878011 - MGP_LPJ_P0074257 Rilpl1 protein_coding protein_coding MGP_LPJ_T0008226.1 MGP_LPJ_G0006707.1 mouse_genomes_project 5 99130803 99144693 + Gm2861 lincRNA lincRNA MGP_LPJ_T0008444.1 MGP_LPJ_G0006849.1 mouse_genomes_project 5 149262207 149262998 + Gm43397 lincRNA lincRNA MGP_LPJ_T0074494.1 MGP_LPJ_G0030046.1 mouse_genomes_project 5 134855170 134867649 + MGP_LPJ_P0074494 Tmem248 protein_coding protein_coding MGP_LPJ_T0074495.1 MGP_LPJ_G0030046.1 mouse_genomes_project 5 134857833 134870733 + MGP_LPJ_P0074495 Tmem248 protein_coding protein_coding MGP_LPJ_T0074496.1 MGP_LPJ_G0030046.1 mouse_genomes_project 5 134857833 134882382 + MGP_LPJ_P0074496 Tmem248 protein_coding protein_coding MGP_LPJ_T0074497.1 MGP_LPJ_G0030046.1 mouse_genomes_project 5 134857929 134870609 + MGP_LPJ_P0074497 Tmem248 protein_coding protein_coding MGP_LPJ_T0074498.1 MGP_LPJ_G0030046.1 mouse_genomes_project 5 134860424 134882283 + MGP_LPJ_P0074498 Tmem248 protein_coding protein_coding MGP_LPJ_T0001609.1 MGP_LPJ_G0001523.1 mouse_genomes_project 5 48824969 48828082 - TEC TEC MGP_LPJ_T0011846.1 MGP_LPJ_G0009942.1 mouse_genomes_project 5 93910723 93918344 - MGP_LPJ_P0011846 Cxcl11 polymorphic_pseudogene polymorphic_pseudogene MGP_LPJ_T0011847.1 MGP_LPJ_G0009942.1 mouse_genomes_project 5 93910726 93914351 - MGP_LPJ_P0011847 Cxcl11 polymorphic_pseudogene protein_coding MGP_LPJ_T0072441.1 MGP_LPJ_G0009942.1 mouse_genomes_project 5 93911962 93914288 - MGP_LPJ_P0072441 Cxcl11 polymorphic_pseudogene unknown_likely_coding MGP_LPJ_T0074433.1 MGP_LPJ_G0030034.1 mouse_genomes_project 5 134395274 134418489 - MGP_LPJ_P0074433 Psph protein_coding protein_coding MGP_LPJ_T0074434.1 MGP_LPJ_G0030034.1 mouse_genomes_project 5 134398954 134401705 - Psph protein_coding processed_transcript MGP_LPJ_T0074435.1 MGP_LPJ_G0030034.1 mouse_genomes_project 5 134399030 134410502 - MGP_LPJ_P0074435 Psph protein_coding protein_coding MGP_LPJ_T0074436.1 MGP_LPJ_G0030034.1 mouse_genomes_project 5 134401249 134418474 - MGP_LPJ_P0074436 Psph protein_coding protein_coding MGP_LPJ_T0074437.1 MGP_LPJ_G0030034.1 mouse_genomes_project 5 134401971 134410495 - Psph protein_coding retained_intron MGP_LPJ_T0074438.1 MGP_LPJ_G0030034.1 mouse_genomes_project 5 134408142 134418572 - Psph protein_coding retained_intron MGP_LPJ_T0074439.1 MGP_LPJ_G0030034.1 mouse_genomes_project 5 134410669 134418527 - Psph protein_coding processed_transcript MGP_LPJ_T0072791.1 MGP_LPJ_G0029731.1 mouse_genomes_project 5 109163435 109244125 - MGP_LPJ_P0072791 Zfp644 protein_coding protein_coding MGP_LPJ_T0072792.1 MGP_LPJ_G0029731.1 mouse_genomes_project 5 109163437 109243269 - MGP_LPJ_P0072792 Zfp644 protein_coding protein_coding MGP_LPJ_T0072793.1 MGP_LPJ_G0029731.1 mouse_genomes_project 5 109163438 109244125 - MGP_LPJ_P0072793 Zfp644 protein_coding protein_coding MGP_LPJ_T0072794.1 MGP_LPJ_G0029731.1 mouse_genomes_project 5 109163440 109243892 - MGP_LPJ_P0072794 Zfp644 protein_coding protein_coding MGP_LPJ_T0072795.1 MGP_LPJ_G0029731.1 mouse_genomes_project 5 109163769 109172024 - Zfp644 protein_coding processed_transcript MGP_LPJ_T0072796.1 MGP_LPJ_G0029731.1 mouse_genomes_project 5 109165607 109244100 - Zfp644 protein_coding processed_transcript MGP_LPJ_T0072797.1 MGP_LPJ_G0029731.1 mouse_genomes_project 5 109184465 109244121 - MGP_LPJ_P0072797 Zfp644 protein_coding protein_coding MGP_LPJ_T0072798.1 MGP_LPJ_G0029731.1 mouse_genomes_project 5 109185476 109243859 - MGP_LPJ_P0072798 Zfp644 protein_coding protein_coding MGP_LPJ_T0072799.1 MGP_LPJ_G0029731.1 mouse_genomes_project 5 109185727 109215074 - MGP_LPJ_P0072799 Zfp644 protein_coding protein_coding MGP_LPJ_T0072800.1 MGP_LPJ_G0029731.1 mouse_genomes_project 5 109185895 109243945 - MGP_LPJ_P0072800 Zfp644 protein_coding protein_coding MGP_LPJ_T0072801.1 MGP_LPJ_G0029731.1 mouse_genomes_project 5 109185942 109243859 - MGP_LPJ_P0072801 Zfp644 protein_coding protein_coding MGP_LPJ_T0072802.1 MGP_LPJ_G0029731.1 mouse_genomes_project 5 109186085 109243945 - MGP_LPJ_P0072802 Zfp644 protein_coding protein_coding MGP_LPJ_T0072803.1 MGP_LPJ_G0029731.1 mouse_genomes_project 5 109236054 109242313 - Zfp644 protein_coding retained_intron MGP_LPJ_T0072804.1 MGP_LPJ_G0029731.1 mouse_genomes_project 5 109237100 109243461 - Zfp644 protein_coding retained_intron MGP_LPJ_T0072805.1 MGP_LPJ_G0029731.1 mouse_genomes_project 5 109237872 109243841 - Zfp644 protein_coding processed_transcript MGP_LPJ_T0072806.1 MGP_LPJ_G0029731.1 mouse_genomes_project 5 109237885 109243839 - Zfp644 protein_coding processed_transcript MGP_LPJ_T0072807.1 MGP_LPJ_G0029731.1 mouse_genomes_project 5 109242344 109244582 - Zfp644 protein_coding processed_transcript MGP_LPJ_T0072808.1 MGP_LPJ_G0029731.1 mouse_genomes_project 5 109242649 109243306 - Zfp644 protein_coding processed_transcript MGP_LPJ_T0001704.1 MGP_LPJ_G0001617.1 mouse_genomes_project 5 69586197 69588037 - TEC TEC MGP_LPJ_T0074726.1 MGP_LPJ_G0030083.1 mouse_genomes_project 5 140330734 140345061 + MGP_LPJ_P0074726 Trim50 protein_coding protein_coding MGP_LPJ_T0074727.1 MGP_LPJ_G0030083.1 mouse_genomes_project 5 140330735 140345492 + MGP_LPJ_P0074727 Trim50 protein_coding protein_coding MGP_LPJ_T0015013.1 MGP_LPJ_G0013104.1 mouse_genomes_project 5 89615388 89615767 + processed_pseudogene processed_pseudogene MGP_LPJ_T0074153.1 MGP_LPJ_G0029985.1 mouse_genomes_project 5 128241378 128252481 + MGP_LPJ_P0074153 Gm43518 protein_coding protein_coding MGP_LPJ_T0014799.1 MGP_LPJ_G0012890.1 mouse_genomes_project 5 4496880 4497881 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015125.1 MGP_LPJ_G0013216.1 mouse_genomes_project 5 143230557 143231299 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004800.1 MGP_LPJ_G0004143.1 mouse_genomes_project 5 115518318 115521588 - Gm20636 antisense antisense MGP_LPJ_T0070279.1 MGP_LPJ_G0029246.1 mouse_genomes_project 5 22639059 22666766 - MGP_LPJ_P0070279 Gbx1 protein_coding protein_coding MGP_LPJ_T0011614.1 MGP_LPJ_G0009732.1 mouse_genomes_project 5 102526787 102526925 + Gm28030 misc_RNA misc_RNA MGP_LPJ_T0004743.1 MGP_LPJ_G0004104.1 mouse_genomes_project 5 75705402 75706001 - Gm42802 antisense antisense MGP_LPJ_T0008077.1 MGP_LPJ_G0006592.1 mouse_genomes_project 5 22580339 22580921 + 2310074N15Rik lincRNA lincRNA MGP_LPJ_T0004897.1 MGP_LPJ_G0004210.1 mouse_genomes_project 5 144793753 144794641 - 4930520M14Rik antisense antisense MGP_LPJ_T0014836.1 MGP_LPJ_G0012927.1 mouse_genomes_project 5 19583343 19583844 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102188.1 MGP_LPJ_G0040225.1 mouse_genomes_project 5 97730972 97733463 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0074796.1 MGP_LPJ_G0030098.1 mouse_genomes_project 5 140992425 141008577 - MGP_LPJ_P0074796 Ssc4d protein_coding protein_coding MGP_LPJ_T0074797.1 MGP_LPJ_G0030098.1 mouse_genomes_project 5 140992437 141008543 - MGP_LPJ_P0074797 Ssc4d protein_coding protein_coding MGP_LPJ_T0074798.1 MGP_LPJ_G0030098.1 mouse_genomes_project 5 140992438 140994543 - MGP_LPJ_P0074798 Ssc4d protein_coding protein_coding MGP_LPJ_T0074799.1 MGP_LPJ_G0030098.1 mouse_genomes_project 5 140993041 140994491 - MGP_LPJ_P0074799 Ssc4d protein_coding protein_coding MGP_LPJ_T0074800.1 MGP_LPJ_G0030098.1 mouse_genomes_project 5 140996899 140999641 - MGP_LPJ_P0074800 Ssc4d protein_coding protein_coding MGP_LPJ_T0074801.1 MGP_LPJ_G0030098.1 mouse_genomes_project 5 140997109 141001746 - MGP_LPJ_P0074801 Ssc4d protein_coding protein_coding MGP_LPJ_T0074802.1 MGP_LPJ_G0030098.1 mouse_genomes_project 5 140999905 141008486 - MGP_LPJ_P0074802 Ssc4d protein_coding protein_coding MGP_LPJ_T0008180.1 MGP_LPJ_G0006667.1 mouse_genomes_project 5 74425792 74427788 + C78283 lincRNA lincRNA MGP_LPJ_T0004895.1 MGP_LPJ_G0004209.1 mouse_genomes_project 5 144553887 144560790 + 6330403L08Rik antisense antisense MGP_LPJ_T0004896.1 MGP_LPJ_G0004209.1 mouse_genomes_project 5 144553887 144560791 + 6330403L08Rik antisense antisense MGP_LPJ_T0014801.1 MGP_LPJ_G0012892.1 mouse_genomes_project 5 5020513 5020805 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004665.1 MGP_LPJ_G0004041.1 mouse_genomes_project 5 19910242 19955390 + Gm10475 antisense antisense MGP_LPJ_T0015005.1 MGP_LPJ_G0013096.1 mouse_genomes_project 5 88409199 88409275 - processed_pseudogene processed_pseudogene MGP_LPJ_T0075022.1 MGP_LPJ_G0030138.1 mouse_genomes_project 5 142852106 142858502 - Pcolce protein_coding retained_intron MGP_LPJ_T0075023.1 MGP_LPJ_G0030138.1 mouse_genomes_project 5 142852106 142858581 - MGP_LPJ_P0075023 Pcolce protein_coding protein_coding MGP_LPJ_T0075024.1 MGP_LPJ_G0030138.1 mouse_genomes_project 5 142852108 142852802 - Pcolce protein_coding retained_intron MGP_LPJ_T0075025.1 MGP_LPJ_G0030138.1 mouse_genomes_project 5 142852108 142857568 - MGP_LPJ_P0075025 Pcolce protein_coding protein_coding MGP_LPJ_T0075026.1 MGP_LPJ_G0030138.1 mouse_genomes_project 5 142852111 142858470 - MGP_LPJ_P0075026 Pcolce protein_coding protein_coding MGP_LPJ_T0075027.1 MGP_LPJ_G0030138.1 mouse_genomes_project 5 142854021 142855196 - Pcolce protein_coding retained_intron MGP_LPJ_T0075028.1 MGP_LPJ_G0030138.1 mouse_genomes_project 5 142854088 142858437 - Pcolce protein_coding processed_transcript MGP_LPJ_T0075029.1 MGP_LPJ_G0030138.1 mouse_genomes_project 5 142854437 142857796 - MGP_LPJ_P0075029 Pcolce protein_coding protein_coding MGP_LPJ_T0075030.1 MGP_LPJ_G0030138.1 mouse_genomes_project 5 142854513 142860901 - MGP_LPJ_P0075030 Pcolce protein_coding protein_coding MGP_LPJ_T0075031.1 MGP_LPJ_G0030138.1 mouse_genomes_project 5 142854513 142860923 - MGP_LPJ_P0075031 Pcolce protein_coding protein_coding MGP_LPJ_T0075032.1 MGP_LPJ_G0030138.1 mouse_genomes_project 5 142854724 142858413 - Pcolce protein_coding retained_intron MGP_LPJ_T0075033.1 MGP_LPJ_G0030138.1 mouse_genomes_project 5 142855942 142858420 - Pcolce protein_coding processed_transcript MGP_LPJ_T0001770.1 MGP_LPJ_G0001682.1 mouse_genomes_project 5 107402743 107403112 - TEC TEC MGP_LPJ_T0072377.1 MGP_LPJ_G0029637.1 mouse_genomes_project 5 92610375 92619198 + MGP_LPJ_P0072377 Areg protein_coding protein_coding MGP_LPJ_T0071818.1 MGP_LPJ_G0029508.1 mouse_genomes_project 5 71913345 72021971 - MGP_LPJ_P0071818 Gabra4 protein_coding protein_coding MGP_LPJ_T0071819.1 MGP_LPJ_G0029508.1 mouse_genomes_project 5 71914797 72021644 - MGP_LPJ_P0071819 Gabra4 protein_coding protein_coding MGP_LPJ_T0071820.1 MGP_LPJ_G0029508.1 mouse_genomes_project 5 71915202 72021553 - MGP_LPJ_P0071820 Gabra4 protein_coding nonsense_mediated_decay MGP_LPJ_T0071821.1 MGP_LPJ_G0029508.1 mouse_genomes_project 5 71915651 72021538 - MGP_LPJ_P0071821 Gabra4 protein_coding protein_coding MGP_LPJ_T0071822.1 MGP_LPJ_G0029508.1 mouse_genomes_project 5 72018858 72021483 - Gabra4 protein_coding retained_intron MGP_LPJ_T0008488.1 MGP_LPJ_G0006882.1 mouse_genomes_project 5 157096244 157098636 - Gm5 lincRNA lincRNA MGP_LPJ_T0008489.1 MGP_LPJ_G0006882.1 mouse_genomes_project 5 157096312 157098807 - Gm5 lincRNA lincRNA MGP_LPJ_T0014804.1 MGP_LPJ_G0012895.1 mouse_genomes_project 5 6432706 6433162 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008228.1 MGP_LPJ_G0006709.1 mouse_genomes_project 5 99331323 99577219 + 4930467D21Rik lincRNA lincRNA MGP_LPJ_T0008229.1 MGP_LPJ_G0006709.1 mouse_genomes_project 5 99331353 99521354 + 4930467D21Rik lincRNA lincRNA MGP_LPJ_T0010701.1 MGP_LPJ_G0008819.1 mouse_genomes_project 5 64138027 64138105 - Gm23967 miRNA miRNA MGP_LPJ_T0070288.1 MGP_LPJ_G0029249.1 mouse_genomes_project 5 22708597 22720857 - MGP_LPJ_P0070288 Abcf2 protein_coding protein_coding MGP_LPJ_T0008303.1 MGP_LPJ_G0006756.1 mouse_genomes_project 5 114891118 114905239 + Gm42487 lincRNA lincRNA MGP_LPJ_T0008304.1 MGP_LPJ_G0006756.1 mouse_genomes_project 5 114892948 114905156 + Gm42487 lincRNA lincRNA MGP_LPJ_T0014819.1 MGP_LPJ_G0012910.1 mouse_genomes_project 5 13641693 13641937 - processed_pseudogene processed_pseudogene MGP_LPJ_T0073558.1 MGP_LPJ_G0029879.1 mouse_genomes_project 5 119505745 119516510 - MGP_LPJ_P0073558 Prkab1 protein_coding protein_coding MGP_LPJ_T0073559.1 MGP_LPJ_G0029879.1 mouse_genomes_project 5 119505749 119516556 - MGP_LPJ_P0073559 Prkab1 protein_coding protein_coding MGP_LPJ_T0073560.1 MGP_LPJ_G0029879.1 mouse_genomes_project 5 119506326 119507321 - Prkab1 protein_coding retained_intron MGP_LPJ_T0073561.1 MGP_LPJ_G0029879.1 mouse_genomes_project 5 119506475 119510223 - Prkab1 protein_coding retained_intron MGP_LPJ_T0073562.1 MGP_LPJ_G0029879.1 mouse_genomes_project 5 119506594 119516404 - MGP_LPJ_P0073562 Prkab1 protein_coding nonsense_mediated_decay MGP_LPJ_T0073563.1 MGP_LPJ_G0029879.1 mouse_genomes_project 5 119506809 119516499 - MGP_LPJ_P0073563 Prkab1 protein_coding nonsense_mediated_decay MGP_LPJ_T0073564.1 MGP_LPJ_G0029879.1 mouse_genomes_project 5 119509826 119516445 - Prkab1 protein_coding retained_intron MGP_LPJ_T0073565.1 MGP_LPJ_G0029879.1 mouse_genomes_project 5 119511719 119513693 - Prkab1 protein_coding retained_intron MGP_LPJ_T0073566.1 MGP_LPJ_G0029879.1 mouse_genomes_project 5 119515945 119516507 - Prkab1 protein_coding retained_intron MGP_LPJ_T0099564.1 MGP_LPJ_G0037827.1 mouse_genomes_project 5 31479629 31479729 + Gm24003 snRNA snRNA MGP_LPJ_T0008240.1 MGP_LPJ_G0006717.1 mouse_genomes_project 5 102262768 102266882 + Gm9932 lincRNA lincRNA MGP_LPJ_T0001741.1 MGP_LPJ_G0001653.1 mouse_genomes_project 5 93474791 93475754 - TEC TEC MGP_LPJ_T0069913.1 MGP_LPJ_G0029186.1 mouse_genomes_project 5 5160710 5463890 - MGP_LPJ_P0069913 Adam22 protein_coding protein_coding MGP_LPJ_T0069914.1 MGP_LPJ_G0029186.1 mouse_genomes_project 5 5160710 5463989 - MGP_LPJ_P0069914 Adam22 protein_coding protein_coding MGP_LPJ_T0069915.1 MGP_LPJ_G0029186.1 mouse_genomes_project 5 5160710 5463890 - MGP_LPJ_P0069915 Adam22 protein_coding protein_coding MGP_LPJ_T0069916.1 MGP_LPJ_G0029186.1 mouse_genomes_project 5 5160710 5463890 - MGP_LPJ_P0069916 Adam22 protein_coding protein_coding MGP_LPJ_T0069917.1 MGP_LPJ_G0029186.1 mouse_genomes_project 5 5160710 5463989 - MGP_LPJ_P0069917 Adam22 protein_coding protein_coding MGP_LPJ_T0069918.1 MGP_LPJ_G0029186.1 mouse_genomes_project 5 5166196 5216768 - MGP_LPJ_P0069918 Adam22 protein_coding protein_coding MGP_LPJ_T0069919.1 MGP_LPJ_G0029186.1 mouse_genomes_project 5 5167040 5209278 - MGP_LPJ_P0069919 Adam22 protein_coding protein_coding MGP_LPJ_T0069920.1 MGP_LPJ_G0029186.1 mouse_genomes_project 5 5167040 5209278 - MGP_LPJ_P0069920 Adam22 protein_coding nonsense_mediated_decay MGP_LPJ_T0069921.1 MGP_LPJ_G0029186.1 mouse_genomes_project 5 5173688 5209278 - MGP_LPJ_P0069921 Adam22 protein_coding protein_coding MGP_LPJ_T0069922.1 MGP_LPJ_G0029186.1 mouse_genomes_project 5 5173688 5209278 - MGP_LPJ_P0069922 Adam22 protein_coding protein_coding MGP_LPJ_T0069923.1 MGP_LPJ_G0029186.1 mouse_genomes_project 5 5173688 5209278 - MGP_LPJ_P0069923 Adam22 protein_coding protein_coding MGP_LPJ_T0069924.1 MGP_LPJ_G0029186.1 mouse_genomes_project 5 5173688 5209278 - MGP_LPJ_P0069924 Adam22 protein_coding protein_coding MGP_LPJ_T0069925.1 MGP_LPJ_G0029186.1 mouse_genomes_project 5 5173688 5209278 - MGP_LPJ_P0069925 Adam22 protein_coding protein_coding MGP_LPJ_T0069926.1 MGP_LPJ_G0029186.1 mouse_genomes_project 5 5173688 5209278 - MGP_LPJ_P0069926 Adam22 protein_coding protein_coding MGP_LPJ_T0069927.1 MGP_LPJ_G0029186.1 mouse_genomes_project 5 5173688 5209278 - MGP_LPJ_P0069927 Adam22 protein_coding protein_coding MGP_LPJ_T0069928.1 MGP_LPJ_G0029186.1 mouse_genomes_project 5 5173688 5209278 - MGP_LPJ_P0069928 Adam22 protein_coding protein_coding MGP_LPJ_T0069929.1 MGP_LPJ_G0029186.1 mouse_genomes_project 5 5173688 5209278 - MGP_LPJ_P0069929 Adam22 protein_coding protein_coding MGP_LPJ_T0069930.1 MGP_LPJ_G0029186.1 mouse_genomes_project 5 5173688 5209278 - MGP_LPJ_P0069930 Adam22 protein_coding protein_coding MGP_LPJ_T0069931.1 MGP_LPJ_G0029186.1 mouse_genomes_project 5 5181156 5183459 - Adam22 protein_coding retained_intron MGP_LPJ_T0069932.1 MGP_LPJ_G0029186.1 mouse_genomes_project 5 5185383 5263262 - MGP_LPJ_P0069932 Adam22 protein_coding unknown_likely_coding MGP_LPJ_T0069933.1 MGP_LPJ_G0029186.1 mouse_genomes_project 5 5185492 5463985 - MGP_LPJ_P0069933 Adam22 protein_coding protein_coding MGP_LPJ_T0069934.1 MGP_LPJ_G0029186.1 mouse_genomes_project 5 5185555 5209278 - MGP_LPJ_P0069934 Adam22 protein_coding protein_coding MGP_LPJ_T0069935.1 MGP_LPJ_G0029186.1 mouse_genomes_project 5 5240110 5463989 - MGP_LPJ_P0069935 Adam22 protein_coding protein_coding MGP_LPJ_T0069936.1 MGP_LPJ_G0029186.1 mouse_genomes_project 5 5325333 5464042 - Adam22 protein_coding processed_transcript MGP_LPJ_T0069937.1 MGP_LPJ_G0029186.1 mouse_genomes_project 5 5462848 5464068 - Adam22 protein_coding retained_intron MGP_LPJ_T0073175.1 MGP_LPJ_G0029808.1 mouse_genomes_project 5 115497797 115500030 - MGP_LPJ_P0073175 Gm6583 protein_coding protein_coding MGP_LPJ_T0018147.1 MGP_LPJ_G0015532.1 mouse_genomes_project 5 144720033 144723151 - Gm15672 processed_transcript processed_transcript MGP_LPJ_T0008307.1 MGP_LPJ_G0006759.1 mouse_genomes_project 5 115344062 115347296 + 1700028D13Rik lincRNA lincRNA MGP_LPJ_T0008308.1 MGP_LPJ_G0006759.1 mouse_genomes_project 5 115344105 115347298 + 1700028D13Rik lincRNA lincRNA MGP_LPJ_T0008397.1 MGP_LPJ_G0006816.1 mouse_genomes_project 5 131302932 131336458 + Gm42954 lincRNA lincRNA MGP_LPJ_T0008454.1 MGP_LPJ_G0006857.1 mouse_genomes_project 5 153099355 153110001 + Gm43741 lincRNA lincRNA MGP_LPJ_T0098627.1 MGP_LPJ_G0036901.1 mouse_genomes_project 5 108088292 108089624 + C230066G23Rik sense_intronic sense_intronic MGP_LPJ_T0099603.1 MGP_LPJ_G0037866.1 mouse_genomes_project 5 107367372 107367479 + Gm24097 snRNA snRNA MGP_LPJ_T0015123.1 MGP_LPJ_G0013214.1 mouse_genomes_project 5 143189270 143190022 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010730.1 MGP_LPJ_G0008848.1 mouse_genomes_project 5 122084411 122084503 - Gm26455 miRNA miRNA MGP_LPJ_T0074078.1 MGP_LPJ_G0029974.1 mouse_genomes_project 5 127764941 127790358 + MGP_LPJ_P0074078 Lrrc43 protein_coding protein_coding MGP_LPJ_T0074079.1 MGP_LPJ_G0029974.1 mouse_genomes_project 5 127764965 127790388 + MGP_LPJ_P0074079 Lrrc43 protein_coding protein_coding MGP_LPJ_T0100854.1 MGP_LPJ_G0039117.1 mouse_genomes_project 5 110557202 110557296 + Snord21 snoRNA snoRNA MGP_LPJ_T0072523.1 MGP_LPJ_G0029666.1 mouse_genomes_project 5 98258215 98681989 + MGP_LPJ_P0072523 Fras1 protein_coding protein_coding MGP_LPJ_T0072524.1 MGP_LPJ_G0029666.1 mouse_genomes_project 5 98258466 98435168 + Fras1 protein_coding retained_intron MGP_LPJ_T0072525.1 MGP_LPJ_G0029666.1 mouse_genomes_project 5 98258695 98275774 + Fras1 protein_coding retained_intron MGP_LPJ_T0072526.1 MGP_LPJ_G0029666.1 mouse_genomes_project 5 98503927 98527016 + Fras1 protein_coding processed_transcript MGP_LPJ_T0072527.1 MGP_LPJ_G0029666.1 mouse_genomes_project 5 98504144 98527128 + Fras1 protein_coding processed_transcript MGP_LPJ_T0072528.1 MGP_LPJ_G0029666.1 mouse_genomes_project 5 98518819 98527016 + Fras1 protein_coding processed_transcript MGP_LPJ_T0075675.1 MGP_LPJ_G0030280.1 mouse_genomes_project 5 152474811 152547164 + MGP_LPJ_P0075675 Cdk8 protein_coding nonsense_mediated_decay MGP_LPJ_T0075676.1 MGP_LPJ_G0030280.1 mouse_genomes_project 5 152474869 152536933 + MGP_LPJ_P0075676 Cdk8 protein_coding protein_coding MGP_LPJ_T0075677.1 MGP_LPJ_G0030280.1 mouse_genomes_project 5 152474966 152515698 + MGP_LPJ_P0075677 Cdk8 protein_coding protein_coding MGP_LPJ_T0075678.1 MGP_LPJ_G0030280.1 mouse_genomes_project 5 152475274 152545984 + MGP_LPJ_P0075678 Cdk8 protein_coding protein_coding MGP_LPJ_T0075679.1 MGP_LPJ_G0030280.1 mouse_genomes_project 5 152501411 152503619 + Cdk8 protein_coding retained_intron MGP_LPJ_T0075680.1 MGP_LPJ_G0030280.1 mouse_genomes_project 5 152530364 152536357 + Cdk8 protein_coding processed_transcript MGP_LPJ_T0075681.1 MGP_LPJ_G0030280.1 mouse_genomes_project 5 152539098 152547109 + Cdk8 protein_coding retained_intron MGP_LPJ_T0075682.1 MGP_LPJ_G0030280.1 mouse_genomes_project 5 152540553 152543701 + Cdk8 protein_coding retained_intron MGP_LPJ_T0008217.1 MGP_LPJ_G0006698.1 mouse_genomes_project 5 93434519 93436519 - Gm43688 lincRNA lincRNA MGP_LPJ_T0072885.1 MGP_LPJ_G0029747.1 mouse_genomes_project 5 110540434 110561589 + MGP_LPJ_P0072885 Rpl5 protein_coding protein_coding MGP_LPJ_T0072886.1 MGP_LPJ_G0029747.1 mouse_genomes_project 5 110540504 110556771 + Rpl5 protein_coding retained_intron MGP_LPJ_T0072887.1 MGP_LPJ_G0029747.1 mouse_genomes_project 5 110540807 110557476 + MGP_LPJ_P0072887 Rpl5 protein_coding protein_coding MGP_LPJ_T0072888.1 MGP_LPJ_G0029747.1 mouse_genomes_project 5 110542053 110556533 + Rpl5 protein_coding retained_intron MGP_LPJ_T0072889.1 MGP_LPJ_G0029747.1 mouse_genomes_project 5 110556761 110560634 + Rpl5 protein_coding retained_intron MGP_LPJ_T0072890.1 MGP_LPJ_G0029747.1 mouse_genomes_project 5 110559205 110560639 + Rpl5 protein_coding retained_intron MGP_LPJ_T0075269.1 MGP_LPJ_G0030186.1 mouse_genomes_project 5 144964239 144966596 + Gpr146 protein_coding processed_transcript MGP_LPJ_T0075270.1 MGP_LPJ_G0030186.1 mouse_genomes_project 5 144964284 144966597 + Gpr146 protein_coding processed_transcript MGP_LPJ_T0075271.1 MGP_LPJ_G0030186.1 mouse_genomes_project 5 144964705 144980541 + MGP_LPJ_P0075271 Gpr146 protein_coding protein_coding MGP_LPJ_T0075272.1 MGP_LPJ_G0030186.1 mouse_genomes_project 5 144964762 144965802 + MGP_LPJ_P0075272 Gpr146 protein_coding protein_coding MGP_LPJ_T0075273.1 MGP_LPJ_G0030186.1 mouse_genomes_project 5 144967123 144984193 + MGP_LPJ_P0075273 Gpr146 protein_coding protein_coding MGP_LPJ_T0075274.1 MGP_LPJ_G0030186.1 mouse_genomes_project 5 144977851 144984192 + MGP_LPJ_P0075274 Gpr146 protein_coding protein_coding MGP_LPJ_T0014834.1 MGP_LPJ_G0012925.1 mouse_genomes_project 5 19233633 19233985 - processed_pseudogene processed_pseudogene MGP_LPJ_T0075131.1 MGP_LPJ_G0030161.1 mouse_genomes_project 5 143507770 143516370 + MGP_LPJ_P0075131 Ap4m1 protein_coding protein_coding MGP_LPJ_T0075132.1 MGP_LPJ_G0030161.1 mouse_genomes_project 5 143507773 143510956 + MGP_LPJ_P0075132 Ap4m1 protein_coding protein_coding MGP_LPJ_T0075133.1 MGP_LPJ_G0030161.1 mouse_genomes_project 5 143507815 143510315 + Ap4m1 protein_coding retained_intron MGP_LPJ_T0075134.1 MGP_LPJ_G0030161.1 mouse_genomes_project 5 143507836 143514624 + MGP_LPJ_P0075134 Ap4m1 protein_coding nonsense_mediated_decay MGP_LPJ_T0075135.1 MGP_LPJ_G0030161.1 mouse_genomes_project 5 143508351 143510887 + Ap4m1 protein_coding retained_intron MGP_LPJ_T0075136.1 MGP_LPJ_G0030161.1 mouse_genomes_project 5 143510728 143513143 + Ap4m1 protein_coding retained_intron MGP_LPJ_T0075137.1 MGP_LPJ_G0030161.1 mouse_genomes_project 5 143512511 143514630 + Ap4m1 protein_coding retained_intron MGP_LPJ_T0004844.1 MGP_LPJ_G0004173.1 mouse_genomes_project 5 126187108 126194332 + Gm15637 antisense antisense MGP_LPJ_T0008445.1 MGP_LPJ_G0006850.1 mouse_genomes_project 5 149325359 149328929 - Gm42504 lincRNA lincRNA MGP_LPJ_T0073144.1 MGP_LPJ_G0029800.1 mouse_genomes_project 5 114495294 114496006 + Mn1 protein_coding processed_transcript MGP_LPJ_T0073145.1 MGP_LPJ_G0029800.1 mouse_genomes_project 5 114495374 114538245 + MGP_LPJ_P0073145 Mn1 protein_coding protein_coding MGP_LPJ_T0072355.1 MGP_LPJ_G0029627.1 mouse_genomes_project 5 92228934 92231167 + Cxcl5 protein_coding retained_intron MGP_LPJ_T0072356.1 MGP_LPJ_G0029627.1 mouse_genomes_project 5 92228952 92231167 + MGP_LPJ_P0072356 Cxcl5 protein_coding protein_coding MGP_LPJ_T0014794.1 MGP_LPJ_G0012885.1 mouse_genomes_project 5 2565254 2565684 + processed_pseudogene processed_pseudogene MGP_LPJ_T0073857.1 MGP_LPJ_G0029941.1 mouse_genomes_project 5 125964337 125969986 + MGP_LPJ_P0073857 Fam109a protein_coding protein_coding MGP_LPJ_T0073858.1 MGP_LPJ_G0029941.1 mouse_genomes_project 5 125964348 125969953 + MGP_LPJ_P0073858 Fam109a protein_coding protein_coding MGP_LPJ_T0073859.1 MGP_LPJ_G0029941.1 mouse_genomes_project 5 125964358 125968238 + MGP_LPJ_P0073859 Fam109a protein_coding protein_coding MGP_LPJ_T0072346.1 MGP_LPJ_G0029625.1 mouse_genomes_project 5 92015633 92053389 + MGP_LPJ_P0072346 5830473C10Rik protein_coding protein_coding MGP_LPJ_T0072347.1 MGP_LPJ_G0029625.1 mouse_genomes_project 5 92015743 92033102 + MGP_LPJ_P0072347 5830473C10Rik protein_coding protein_coding MGP_LPJ_T0072412.1 MGP_LPJ_G0029645.1 mouse_genomes_project 5 93745400 93750915 - MGP_LPJ_P0072412 U90926 protein_coding protein_coding MGP_LPJ_T0072413.1 MGP_LPJ_G0029645.1 mouse_genomes_project 5 93745403 93750915 - MGP_LPJ_P0072413 U90926 protein_coding protein_coding MGP_LPJ_T0072414.1 MGP_LPJ_G0029645.1 mouse_genomes_project 5 93745621 93747859 - U90926 protein_coding retained_intron MGP_LPJ_T0001596.1 MGP_LPJ_G0001510.1 mouse_genomes_project 5 48288101 48288929 - TEC TEC MGP_LPJ_T0073515.1 MGP_LPJ_G0029874.1 mouse_genomes_project 5 119014819 119020112 + MGP_LPJ_P0073515 protein_coding protein_coding MGP_LPJ_T0102177.1 MGP_LPJ_G0040214.1 mouse_genomes_project 5 84980709 84981298 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0004666.1 MGP_LPJ_G0004042.1 mouse_genomes_project 5 20326272 20327949 + Gm16110 antisense antisense MGP_LPJ_T0018148.1 MGP_LPJ_G0015533.1 mouse_genomes_project 5 155422602 155430698 - 1810059H22Rik processed_transcript lincRNA MGP_LPJ_T0018149.1 MGP_LPJ_G0015533.1 mouse_genomes_project 5 155423498 155425351 - 1810059H22Rik processed_transcript retained_intron MGP_LPJ_T0018150.1 MGP_LPJ_G0015533.1 mouse_genomes_project 5 155429147 155430192 - 1810059H22Rik processed_transcript lincRNA MGP_LPJ_T0018151.1 MGP_LPJ_G0015533.1 mouse_genomes_project 5 155429219 155440341 - 1810059H22Rik processed_transcript lincRNA MGP_LPJ_T0018152.1 MGP_LPJ_G0015533.1 mouse_genomes_project 5 155429438 155430168 - 1810059H22Rik processed_transcript retained_intron MGP_LPJ_T0018153.1 MGP_LPJ_G0015533.1 mouse_genomes_project 5 155429681 155434752 - 1810059H22Rik processed_transcript retained_intron MGP_LPJ_T0018154.1 MGP_LPJ_G0015533.1 mouse_genomes_project 5 155434419 155440355 - 1810059H22Rik processed_transcript lincRNA MGP_LPJ_T0018155.1 MGP_LPJ_G0015533.1 mouse_genomes_project 5 155435238 155440581 - 1810059H22Rik processed_transcript lincRNA MGP_LPJ_T0001537.1 MGP_LPJ_G0001451.1 mouse_genomes_project 5 33144298 33146723 + TEC TEC MGP_LPJ_T0099579.1 MGP_LPJ_G0037842.1 mouse_genomes_project 5 70080547 70080673 - Gm26044 snRNA snRNA MGP_LPJ_T0014913.1 MGP_LPJ_G0013004.1 mouse_genomes_project 5 43047489 43048069 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015168.1 MGP_LPJ_G0013259.1 mouse_genomes_project 5 156031337 156031887 - processed_pseudogene processed_pseudogene MGP_LPJ_T0071153.1 MGP_LPJ_G0029394.1 mouse_genomes_project 5 35580903 35581257 - MGP_LPJ_P0071153 Mrfap1 protein_coding protein_coding MGP_LPJ_T0073639.1 MGP_LPJ_G0029895.1 mouse_genomes_project 5 121806671 121830509 + Hrk protein_coding processed_transcript MGP_LPJ_T0073640.1 MGP_LPJ_G0029895.1 mouse_genomes_project 5 121815370 121835155 + MGP_LPJ_P0073640 Hrk protein_coding protein_coding MGP_LPJ_T0072358.1 MGP_LPJ_G0029629.1 mouse_genomes_project 5 92241966 92242915 + MGP_LPJ_P0072358 Pf4 protein_coding protein_coding MGP_LPJ_T0072359.1 MGP_LPJ_G0029629.1 mouse_genomes_project 5 92242044 92242688 + MGP_LPJ_P0072359 Pf4 protein_coding protein_coding MGP_LPJ_T0072360.1 MGP_LPJ_G0029629.1 mouse_genomes_project 5 92242422 92242910 + Pf4 protein_coding retained_intron MGP_LPJ_T0001694.1 MGP_LPJ_G0001607.1 mouse_genomes_project 5 68116960 68120439 - TEC TEC MGP_LPJ_T0001892.1 MGP_LPJ_G0001803.1 mouse_genomes_project 5 137004182 137005818 - TEC TEC MGP_LPJ_T0015053.1 MGP_LPJ_G0013144.1 mouse_genomes_project 5 108809837 108810693 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011618.1 MGP_LPJ_G0009736.1 mouse_genomes_project 5 114352471 114352582 - Gm27602 misc_RNA misc_RNA MGP_LPJ_T0072631.1 MGP_LPJ_G0029689.1 mouse_genomes_project 5 102658142 102679322 - MGP_LPJ_P0072631 Plac8 protein_coding protein_coding MGP_LPJ_T0072632.1 MGP_LPJ_G0029689.1 mouse_genomes_project 5 102658143 102668149 - MGP_LPJ_P0072632 Plac8 protein_coding protein_coding MGP_LPJ_T0072633.1 MGP_LPJ_G0029689.1 mouse_genomes_project 5 102658144 102668714 - MGP_LPJ_P0072633 Plac8 protein_coding protein_coding MGP_LPJ_T0072634.1 MGP_LPJ_G0029689.1 mouse_genomes_project 5 102667727 102679269 - Plac8 protein_coding retained_intron MGP_LPJ_T0010696.1 MGP_LPJ_G0008814.1 mouse_genomes_project 5 33701877 33701944 + Mir3097 miRNA miRNA MGP_LPJ_T0001836.1 MGP_LPJ_G0001748.1 mouse_genomes_project 5 126660863 126663025 - TEC TEC MGP_LPJ_T0010705.1 MGP_LPJ_G0008823.1 mouse_genomes_project 5 66182352 66182426 + Gm25952 miRNA miRNA MGP_LPJ_T0071533.1 MGP_LPJ_G0029459.1 mouse_genomes_project 5 61774984 61777332 + MGP_LPJ_P0071533 G6pd2 protein_coding protein_coding MGP_LPJ_T0004710.1 MGP_LPJ_G0004077.1 mouse_genomes_project 5 43776784 43795606 + Gm43507 antisense antisense MGP_LPJ_T0004711.1 MGP_LPJ_G0004077.1 mouse_genomes_project 5 43786653 43797017 + Gm43507 antisense antisense MGP_LPJ_T0098621.1 MGP_LPJ_G0036895.1 mouse_genomes_project 5 43838231 43845528 - Gm3364 sense_intronic sense_intronic MGP_LPJ_T0001485.1 MGP_LPJ_G0001402.1 mouse_genomes_project 5 11641047 11642913 + TEC TEC MGP_LPJ_T0100847.1 MGP_LPJ_G0039110.1 mouse_genomes_project 5 93726984 93727128 + Gm25290 snoRNA snoRNA MGP_LPJ_T0004886.1 MGP_LPJ_G0004204.1 mouse_genomes_project 5 141335983 141483452 + Gm16599 antisense antisense MGP_LPJ_T0074201.1 MGP_LPJ_G0029993.1 mouse_genomes_project 5 128596070 128679004 - MGP_LPJ_P0074201 Mphosph9 protein_coding protein_coding MGP_LPJ_T0074202.1 MGP_LPJ_G0029993.1 mouse_genomes_project 5 128597781 128678881 - MGP_LPJ_P0074202 Mphosph9 protein_coding nonsense_mediated_decay MGP_LPJ_T0074203.1 MGP_LPJ_G0029993.1 mouse_genomes_project 5 128598779 128678884 - MGP_LPJ_P0074203 Mphosph9 protein_coding protein_coding MGP_LPJ_T0074204.1 MGP_LPJ_G0029993.1 mouse_genomes_project 5 128599729 128606215 - Mphosph9 protein_coding processed_transcript MGP_LPJ_T0074205.1 MGP_LPJ_G0029993.1 mouse_genomes_project 5 128604104 128610437 - Mphosph9 protein_coding processed_transcript MGP_LPJ_T0074206.1 MGP_LPJ_G0029993.1 mouse_genomes_project 5 128606051 128608130 - Mphosph9 protein_coding processed_transcript MGP_LPJ_T0074207.1 MGP_LPJ_G0029993.1 mouse_genomes_project 5 128607062 128608501 - Mphosph9 protein_coding retained_intron MGP_LPJ_T0074208.1 MGP_LPJ_G0029993.1 mouse_genomes_project 5 128635599 128678902 - MGP_LPJ_P0074208 Mphosph9 protein_coding nonsense_mediated_decay MGP_LPJ_T0074209.1 MGP_LPJ_G0029993.1 mouse_genomes_project 5 128642930 128676160 - MGP_LPJ_P0074209 Mphosph9 protein_coding nonsense_mediated_decay MGP_LPJ_T0074210.1 MGP_LPJ_G0029993.1 mouse_genomes_project 5 128664587 128679004 - Mphosph9 protein_coding processed_transcript MGP_LPJ_T0074211.1 MGP_LPJ_G0029993.1 mouse_genomes_project 5 128664587 128678884 - Mphosph9 protein_coding processed_transcript MGP_LPJ_T0072996.1 MGP_LPJ_G0029772.1 mouse_genomes_project 5 112095595 112110751 - MGP_LPJ_P0072996 protein_coding protein_coding MGP_LPJ_T0075037.1 MGP_LPJ_G0030140.1 mouse_genomes_project 5 142878476 142890445 + MGP_LPJ_P0075037 protein_coding protein_coding MGP_LPJ_T0075038.1 MGP_LPJ_G0030140.1 mouse_genomes_project 5 142878498 142886150 + protein_coding retained_intron MGP_LPJ_T0075039.1 MGP_LPJ_G0030140.1 mouse_genomes_project 5 142878507 142886965 + MGP_LPJ_P0075039 protein_coding nonsense_mediated_decay MGP_LPJ_T0075041.1 MGP_LPJ_G0030140.1 mouse_genomes_project 5 142878533 142883243 + MGP_LPJ_P0075041 protein_coding nonsense_mediated_decay MGP_LPJ_T0075042.1 MGP_LPJ_G0030140.1 mouse_genomes_project 5 142878533 142890450 + MGP_LPJ_P0075042 protein_coding protein_coding MGP_LPJ_T0075043.1 MGP_LPJ_G0030140.1 mouse_genomes_project 5 142879485 142889531 + MGP_LPJ_P0075043 protein_coding protein_coding MGP_LPJ_T0075044.1 MGP_LPJ_G0030140.1 mouse_genomes_project 5 142887670 142888714 + MGP_LPJ_P0075044 protein_coding protein_coding MGP_LPJ_T0075045.1 MGP_LPJ_G0030140.1 mouse_genomes_project 5 142888716 142889590 + MGP_LPJ_P0075045 protein_coding protein_coding MGP_LPJ_T0073630.1 MGP_LPJ_G0029893.1 mouse_genomes_project 5 121659013 121697824 + MGP_LPJ_P0073630 Tesc protein_coding protein_coding MGP_LPJ_T0073631.1 MGP_LPJ_G0029893.1 mouse_genomes_project 5 121659035 121697791 + MGP_LPJ_P0073631 Tesc protein_coding nonsense_mediated_decay MGP_LPJ_T0073632.1 MGP_LPJ_G0029893.1 mouse_genomes_project 5 121659140 121697816 + Tesc protein_coding retained_intron MGP_LPJ_T0073633.1 MGP_LPJ_G0029893.1 mouse_genomes_project 5 121669348 121697719 + Tesc protein_coding processed_transcript MGP_LPJ_T0073634.1 MGP_LPJ_G0029893.1 mouse_genomes_project 5 121675712 121689623 + Tesc protein_coding processed_transcript MGP_LPJ_T0073635.1 MGP_LPJ_G0029893.1 mouse_genomes_project 5 121675713 121682457 + Tesc protein_coding processed_transcript MGP_LPJ_T0004750.1 MGP_LPJ_G0004110.1 mouse_genomes_project 5 87986609 88017222 + Gm16579 antisense antisense MGP_LPJ_T0008459.1 MGP_LPJ_G0006862.1 mouse_genomes_project 5 155160602 155169313 + Gm36186 lincRNA lincRNA MGP_LPJ_T0001801.1 MGP_LPJ_G0001713.1 mouse_genomes_project 5 118367353 118367911 + TEC TEC MGP_LPJ_T0004726.1 MGP_LPJ_G0004090.1 mouse_genomes_project 5 66375386 66403023 - 1700126H18Rik antisense antisense MGP_LPJ_T0008134.1 MGP_LPJ_G0006629.1 mouse_genomes_project 5 42548655 42552817 + Gm43021 lincRNA lincRNA MGP_LPJ_T0008317.1 MGP_LPJ_G0006763.1 mouse_genomes_project 5 115737721 115744777 - 1700034G24Rik lincRNA lincRNA MGP_LPJ_T0008318.1 MGP_LPJ_G0006763.1 mouse_genomes_project 5 115737810 115744777 - 1700034G24Rik lincRNA lincRNA MGP_LPJ_T0015153.1 MGP_LPJ_G0013244.1 mouse_genomes_project 5 152070530 152070853 - processed_pseudogene processed_pseudogene MGP_LPJ_T0071879.1 MGP_LPJ_G0029519.1 mouse_genomes_project 5 73374134 73383030 - MGP_LPJ_P0071879 Gm10135 protein_coding protein_coding MGP_LPJ_T0008130.1 MGP_LPJ_G0006625.1 mouse_genomes_project 5 42082868 42094557 - Gm43700 lincRNA lincRNA MGP_LPJ_T0014901.1 MGP_LPJ_G0012992.1 mouse_genomes_project 5 36228130 36228610 - processed_pseudogene processed_pseudogene MGP_LPJ_T0070739.1 MGP_LPJ_G0029330.1 mouse_genomes_project 5 30073061 30134856 + Mrpl33 protein_coding processed_transcript MGP_LPJ_T0070740.1 MGP_LPJ_G0029330.1 mouse_genomes_project 5 30074783 30101571 + Mrpl33 protein_coding processed_transcript MGP_LPJ_T0070741.1 MGP_LPJ_G0029330.1 mouse_genomes_project 5 30090951 30101571 + MGP_LPJ_P0070741 Mrpl33 protein_coding protein_coding MGP_LPJ_T0070742.1 MGP_LPJ_G0029330.1 mouse_genomes_project 5 30090968 30121765 + Mrpl33 protein_coding processed_transcript MGP_LPJ_T0070743.1 MGP_LPJ_G0029330.1 mouse_genomes_project 5 30090984 30134856 + Mrpl33 protein_coding processed_transcript MGP_LPJ_T0070744.1 MGP_LPJ_G0029330.1 mouse_genomes_project 5 30090997 30144374 + MGP_LPJ_P0070744 Mrpl33 protein_coding nonsense_mediated_decay MGP_LPJ_T0070745.1 MGP_LPJ_G0029330.1 mouse_genomes_project 5 30091031 30101569 + Mrpl33 protein_coding retained_intron MGP_LPJ_T0070746.1 MGP_LPJ_G0029330.1 mouse_genomes_project 5 30091035 30101564 + Mrpl33 protein_coding processed_transcript MGP_LPJ_T0070747.1 MGP_LPJ_G0029330.1 mouse_genomes_project 5 30091170 30101499 + Mrpl33 protein_coding retained_intron MGP_LPJ_T0070750.1 MGP_LPJ_G0029330.1 mouse_genomes_project 5 30134619 30138127 + Mrpl33 protein_coding processed_transcript MGP_LPJ_T0070751.1 MGP_LPJ_G0029330.1 mouse_genomes_project 5 30135490 30143421 + Mrpl33 protein_coding processed_transcript MGP_LPJ_T0014930.1 MGP_LPJ_G0013021.1 mouse_genomes_project 5 54205662 54205816 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008266.1 MGP_LPJ_G0006733.1 mouse_genomes_project 5 108858819 108860657 + Gm32921 lincRNA lincRNA MGP_LPJ_T0004890.1 MGP_LPJ_G0004208.1 mouse_genomes_project 5 143660866 143663485 + 6330418K02Rik antisense antisense MGP_LPJ_T0004891.1 MGP_LPJ_G0004208.1 mouse_genomes_project 5 143660877 143663156 + 6330418K02Rik antisense antisense MGP_LPJ_T0004892.1 MGP_LPJ_G0004208.1 mouse_genomes_project 5 143660892 143663485 + 6330418K02Rik antisense antisense MGP_LPJ_T0004893.1 MGP_LPJ_G0004208.1 mouse_genomes_project 5 143660931 143663053 + 6330418K02Rik antisense antisense MGP_LPJ_T0004894.1 MGP_LPJ_G0004208.1 mouse_genomes_project 5 143662367 143662907 + 6330418K02Rik antisense antisense MGP_LPJ_T0070022.1 MGP_LPJ_G0029201.1 mouse_genomes_project 5 12144568 12471194 + MGP_LPJ_P0070022 protein_coding protein_coding MGP_LPJ_T0070023.1 MGP_LPJ_G0029201.1 mouse_genomes_project 5 12144568 12539151 + MGP_LPJ_P0070023 protein_coding protein_coding MGP_LPJ_T0070024.1 MGP_LPJ_G0029201.1 mouse_genomes_project 5 12144643 12534785 + protein_coding retained_intron MGP_LPJ_T0070025.1 MGP_LPJ_G0029201.1 mouse_genomes_project 5 12324164 12471205 + MGP_LPJ_P0070025 protein_coding protein_coding MGP_LPJ_T0014920.1 MGP_LPJ_G0013011.1 mouse_genomes_project 5 47937947 47939312 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014977.1 MGP_LPJ_G0013068.1 mouse_genomes_project 5 73125941 73126251 + processed_pseudogene processed_pseudogene MGP_LPJ_T0073113.1 MGP_LPJ_G0029795.1 mouse_genomes_project 5 113817613 113842997 - MGP_LPJ_P0073113 Ulk1 protein_coding protein_coding MGP_LPJ_T0073114.1 MGP_LPJ_G0029795.1 mouse_genomes_project 5 113818951 113820897 - MGP_LPJ_P0073114 Ulk1 protein_coding nonsense_mediated_decay MGP_LPJ_T0073115.1 MGP_LPJ_G0029795.1 mouse_genomes_project 5 113818973 113822005 - MGP_LPJ_P0073115 Ulk1 protein_coding nonsense_mediated_decay MGP_LPJ_T0073116.1 MGP_LPJ_G0029795.1 mouse_genomes_project 5 113818990 113820173 - Ulk1 protein_coding retained_intron MGP_LPJ_T0073117.1 MGP_LPJ_G0029795.1 mouse_genomes_project 5 113819045 113842953 - MGP_LPJ_P0073117 Ulk1 protein_coding protein_coding MGP_LPJ_T0073118.1 MGP_LPJ_G0029795.1 mouse_genomes_project 5 113820842 113821619 - Ulk1 protein_coding retained_intron MGP_LPJ_T0073119.1 MGP_LPJ_G0029795.1 mouse_genomes_project 5 113821208 113822418 - Ulk1 protein_coding retained_intron MGP_LPJ_T0073120.1 MGP_LPJ_G0029795.1 mouse_genomes_project 5 113824349 113825144 - Ulk1 protein_coding retained_intron MGP_LPJ_T0073121.1 MGP_LPJ_G0029795.1 mouse_genomes_project 5 113824624 113826357 - Ulk1 protein_coding retained_intron MGP_LPJ_T0073122.1 MGP_LPJ_G0029795.1 mouse_genomes_project 5 113825347 113828748 - Ulk1 protein_coding processed_transcript MGP_LPJ_T0073123.1 MGP_LPJ_G0029795.1 mouse_genomes_project 5 113826552 113828785 - Ulk1 protein_coding retained_intron MGP_LPJ_T0008474.1 MGP_LPJ_G0006874.1 mouse_genomes_project 5 155694621 155695667 + Gm43332 lincRNA lincRNA MGP_LPJ_T0008452.1 MGP_LPJ_G0006855.1 mouse_genomes_project 5 152870101 152883553 - Gm34333 lincRNA lincRNA MGP_LPJ_T0071874.1 MGP_LPJ_G0029518.1 mouse_genomes_project 5 73326451 73392233 + MGP_LPJ_P0071874 Slain2 protein_coding protein_coding MGP_LPJ_T0071875.1 MGP_LPJ_G0029518.1 mouse_genomes_project 5 73326516 73392215 + MGP_LPJ_P0071875 Slain2 protein_coding protein_coding MGP_LPJ_T0071876.1 MGP_LPJ_G0029518.1 mouse_genomes_project 5 73326563 73330633 + Slain2 protein_coding retained_intron MGP_LPJ_T0071877.1 MGP_LPJ_G0029518.1 mouse_genomes_project 5 73326815 73365738 + MGP_LPJ_P0071877 Slain2 protein_coding protein_coding MGP_LPJ_T0071878.1 MGP_LPJ_G0029518.1 mouse_genomes_project 5 73357034 73383030 + Slain2 protein_coding retained_intron MGP_LPJ_T0073784.1 MGP_LPJ_G0029930.1 mouse_genomes_project 5 125454781 125530538 + MGP_LPJ_P0073784 Tmem116 protein_coding protein_coding MGP_LPJ_T0073785.1 MGP_LPJ_G0029930.1 mouse_genomes_project 5 125455463 125496150 + MGP_LPJ_P0073785 Tmem116 protein_coding nonsense_mediated_decay MGP_LPJ_T0073786.1 MGP_LPJ_G0029930.1 mouse_genomes_project 5 125455463 125497513 + MGP_LPJ_P0073786 Tmem116 protein_coding protein_coding MGP_LPJ_T0073787.1 MGP_LPJ_G0029930.1 mouse_genomes_project 5 125455513 125484195 + MGP_LPJ_P0073787 Tmem116 protein_coding nonsense_mediated_decay MGP_LPJ_T0073788.1 MGP_LPJ_G0029930.1 mouse_genomes_project 5 125455594 125484195 + Tmem116 protein_coding processed_transcript MGP_LPJ_T0073789.1 MGP_LPJ_G0029930.1 mouse_genomes_project 5 125465782 125497520 + MGP_LPJ_P0073789 Tmem116 protein_coding protein_coding MGP_LPJ_T0073790.1 MGP_LPJ_G0029930.1 mouse_genomes_project 5 125465853 125497293 + MGP_LPJ_P0073790 Tmem116 protein_coding protein_coding MGP_LPJ_T0070940.1 MGP_LPJ_G0029362.1 mouse_genomes_project 5 32929421 32973025 + MGP_LPJ_P0070940 unknown_likely_coding unknown_likely_coding MGP_LPJ_T0102183.1 MGP_LPJ_G0040220.1 mouse_genomes_project 5 88506649 88517348 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0075082.1 MGP_LPJ_G0030149.1 mouse_genomes_project 5 143064939 143100416 + MGP_LPJ_P0075082 protein_coding unknown_likely_coding MGP_LPJ_T0075083.1 MGP_LPJ_G0030149.1 mouse_genomes_project 5 143070474 143073763 + protein_coding retained_intron MGP_LPJ_T0075084.1 MGP_LPJ_G0030149.1 mouse_genomes_project 5 143077152 143079026 + protein_coding retained_intron MGP_LPJ_T0075085.1 MGP_LPJ_G0030149.1 mouse_genomes_project 5 143077381 143089638 + protein_coding processed_transcript MGP_LPJ_T0075086.1 MGP_LPJ_G0030149.1 mouse_genomes_project 5 143088854 143100118 + MGP_LPJ_P0075086 protein_coding protein_coding MGP_LPJ_T0008078.1 MGP_LPJ_G0006593.1 mouse_genomes_project 5 23167141 23181048 + 1500035N22Rik lincRNA lincRNA MGP_LPJ_T0073927.1 MGP_LPJ_G0029953.1 mouse_genomes_project 5 126567191 126578382 + Arpc3 protein_coding retained_intron MGP_LPJ_T0073928.1 MGP_LPJ_G0029953.1 mouse_genomes_project 5 126567235 126573248 + Arpc3 protein_coding retained_intron MGP_LPJ_T0073929.1 MGP_LPJ_G0029953.1 mouse_genomes_project 5 126567261 126581987 + MGP_LPJ_P0073929 Arpc3 protein_coding protein_coding MGP_LPJ_T0073930.1 MGP_LPJ_G0029953.1 mouse_genomes_project 5 126572921 126591760 + MGP_LPJ_P0073930 Arpc3 protein_coding protein_coding MGP_LPJ_T0073931.1 MGP_LPJ_G0029953.1 mouse_genomes_project 5 126576326 126582202 + MGP_LPJ_P0073931 Arpc3 protein_coding protein_coding MGP_LPJ_T0073932.1 MGP_LPJ_G0029953.1 mouse_genomes_project 5 126576453 126582193 + MGP_LPJ_P0073932 Arpc3 protein_coding protein_coding MGP_LPJ_T0073933.1 MGP_LPJ_G0029953.1 mouse_genomes_project 5 126579469 126580837 + Arpc3 protein_coding retained_intron MGP_LPJ_T0001564.1 MGP_LPJ_G0001478.1 mouse_genomes_project 5 43613178 43618320 - TEC TEC MGP_LPJ_T0014957.1 MGP_LPJ_G0013048.1 mouse_genomes_project 5 64226340 64227211 + processed_pseudogene processed_pseudogene MGP_LPJ_T0072764.1 MGP_LPJ_G0029724.1 mouse_genomes_project 5 107816785 107873352 - MGP_LPJ_P0072764 protein_coding nonsense_mediated_decay MGP_LPJ_T0099592.1 MGP_LPJ_G0037855.1 mouse_genomes_project 5 87030752 87030913 + Gm24626 snRNA snRNA MGP_LPJ_T0004871.1 MGP_LPJ_G0004191.1 mouse_genomes_project 5 136382180 136392831 + 2810432F15Rik antisense antisense MGP_LPJ_T0010699.1 MGP_LPJ_G0008817.1 mouse_genomes_project 5 47485908 47486018 + Mir218-1 miRNA miRNA MGP_LPJ_T0010743.1 MGP_LPJ_G0008861.1 mouse_genomes_project 5 140861997 140862075 - Gm23268 miRNA miRNA MGP_LPJ_T0074333.1 MGP_LPJ_G0030014.1 mouse_genomes_project 5 129780375 129804753 - MGP_LPJ_P0074333 Dhx37 protein_coding protein_coding MGP_LPJ_T0074334.1 MGP_LPJ_G0030014.1 mouse_genomes_project 5 129782465 129783575 - MGP_LPJ_P0074334 Dhx37 protein_coding protein_coding MGP_LPJ_T0074335.1 MGP_LPJ_G0030014.1 mouse_genomes_project 5 129783977 129786527 - Dhx37 protein_coding retained_intron MGP_LPJ_T0074336.1 MGP_LPJ_G0030014.1 mouse_genomes_project 5 129791240 129794474 - MGP_LPJ_P0074336 Dhx37 protein_coding nonsense_mediated_decay MGP_LPJ_T0100863.1 MGP_LPJ_G0039126.1 mouse_genomes_project 5 150748243 150748372 + Gm23995 snoRNA snoRNA MGP_LPJ_T0015081.1 MGP_LPJ_G0013172.1 mouse_genomes_project 5 114043489 114043856 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001755.1 MGP_LPJ_G0001667.1 mouse_genomes_project 5 100313480 100316214 + TEC TEC MGP_LPJ_T0102193.1 MGP_LPJ_G0040230.1 mouse_genomes_project 5 130240104 130240769 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0014843.1 MGP_LPJ_G0012934.1 mouse_genomes_project 5 20665175 20667800 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004793.1 MGP_LPJ_G0004137.1 mouse_genomes_project 5 113234293 113234887 - Gm43137 antisense antisense MGP_LPJ_T0001610.1 MGP_LPJ_G0001524.1 mouse_genomes_project 5 49264294 49265444 - TEC TEC MGP_LPJ_T0070084.1 MGP_LPJ_G0029212.1 mouse_genomes_project 5 18930132 19005675 - MGP_LPJ_P0070084 Ptpn12 protein_coding protein_coding MGP_LPJ_T0070085.1 MGP_LPJ_G0029212.1 mouse_genomes_project 5 18930133 18932749 - Ptpn12 protein_coding retained_intron MGP_LPJ_T0070086.1 MGP_LPJ_G0029212.1 mouse_genomes_project 5 18941600 18945742 - Ptpn12 protein_coding retained_intron MGP_LPJ_T0070087.1 MGP_LPJ_G0029212.1 mouse_genomes_project 5 18941774 18953894 - Ptpn12 protein_coding retained_intron MGP_LPJ_T0070088.1 MGP_LPJ_G0029212.1 mouse_genomes_project 5 18945618 19005517 - MGP_LPJ_P0070088 Ptpn12 protein_coding nonsense_mediated_decay MGP_LPJ_T0070089.1 MGP_LPJ_G0029212.1 mouse_genomes_project 5 18949680 19005661 - MGP_LPJ_P0070089 Ptpn12 protein_coding nonsense_mediated_decay MGP_LPJ_T0070090.1 MGP_LPJ_G0029212.1 mouse_genomes_project 5 18953731 19005489 - MGP_LPJ_P0070090 Ptpn12 protein_coding nonsense_mediated_decay MGP_LPJ_T0072650.1 MGP_LPJ_G0029693.1 mouse_genomes_project 5 102921990 102927778 + MGP_LPJ_P0072650 Mrps18c protein_coding protein_coding MGP_LPJ_T0072651.1 MGP_LPJ_G0029693.1 mouse_genomes_project 5 102922044 102922991 + Mrps18c protein_coding retained_intron MGP_LPJ_T0072652.1 MGP_LPJ_G0029693.1 mouse_genomes_project 5 102922044 102927785 + MGP_LPJ_P0072652 Mrps18c protein_coding nonsense_mediated_decay MGP_LPJ_T0072653.1 MGP_LPJ_G0029693.1 mouse_genomes_project 5 102922048 102927788 + MGP_LPJ_P0072653 Mrps18c protein_coding protein_coding MGP_LPJ_T0072654.1 MGP_LPJ_G0029693.1 mouse_genomes_project 5 102927252 102927786 + Mrps18c protein_coding retained_intron MGP_LPJ_T0071024.1 MGP_LPJ_G0029372.1 mouse_genomes_project 5 33582854 33593162 + Msantd1 protein_coding processed_transcript MGP_LPJ_T0071025.1 MGP_LPJ_G0029372.1 mouse_genomes_project 5 33589774 33598910 + MGP_LPJ_P0071025 Msantd1 protein_coding unknown_likely_coding MGP_LPJ_T0071026.1 MGP_LPJ_G0029372.1 mouse_genomes_project 5 33591260 33599185 + MGP_LPJ_P0071026 Msantd1 protein_coding protein_coding MGP_LPJ_T0071027.1 MGP_LPJ_G0029372.1 mouse_genomes_project 5 33592884 33599036 + MGP_LPJ_P0071027 Msantd1 protein_coding protein_coding MGP_LPJ_T0099615.1 MGP_LPJ_G0037878.1 mouse_genomes_project 5 125355055 125355213 + Gm24671 snRNA snRNA MGP_LPJ_T0075372.1 MGP_LPJ_G0030210.1 mouse_genomes_project 5 146490228 146561087 - MGP_LPJ_P0075372 Gna12 protein_coding protein_coding MGP_LPJ_T0073410.1 MGP_LPJ_G0029853.1 mouse_genomes_project 5 118304899 118322708 + MGP_LPJ_P0073410 Oasl1 protein_coding protein_coding MGP_LPJ_T0073411.1 MGP_LPJ_G0029853.1 mouse_genomes_project 5 118304923 118322711 + MGP_LPJ_P0073411 Oasl1 protein_coding protein_coding MGP_LPJ_T0073412.1 MGP_LPJ_G0029853.1 mouse_genomes_project 5 118305081 118319848 + Oasl1 protein_coding processed_transcript MGP_LPJ_T0073413.1 MGP_LPJ_G0029853.1 mouse_genomes_project 5 118305094 118319940 + Oasl1 protein_coding processed_transcript MGP_LPJ_T0073414.1 MGP_LPJ_G0029853.1 mouse_genomes_project 5 118311544 118317234 + Oasl1 protein_coding retained_intron MGP_LPJ_T0073415.1 MGP_LPJ_G0029853.1 mouse_genomes_project 5 118319897 118322483 + Oasl1 protein_coding processed_transcript MGP_LPJ_T0011612.1 MGP_LPJ_G0009730.1 mouse_genomes_project 5 102518196 102518270 + Gm27553 misc_RNA misc_RNA MGP_LPJ_T0004876.1 MGP_LPJ_G0004196.1 mouse_genomes_project 5 139581754 139585410 + Gm10369 antisense antisense MGP_LPJ_T0001665.1 MGP_LPJ_G0001578.1 mouse_genomes_project 5 65789902 65793881 + TEC TEC MGP_LPJ_T0072891.1 MGP_LPJ_G0029748.1 mouse_genomes_project 5 110560636 110637911 - MGP_LPJ_P0072891 Fam69a protein_coding protein_coding MGP_LPJ_T0072892.1 MGP_LPJ_G0029748.1 mouse_genomes_project 5 110562286 110637836 - MGP_LPJ_P0072892 Fam69a protein_coding protein_coding MGP_LPJ_T0072893.1 MGP_LPJ_G0029748.1 mouse_genomes_project 5 110566950 110622165 - MGP_LPJ_P0072893 Fam69a protein_coding protein_coding MGP_LPJ_T0015007.1 MGP_LPJ_G0013098.1 mouse_genomes_project 5 88952145 88952554 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008082.1 MGP_LPJ_G0006597.1 mouse_genomes_project 5 23877378 23878937 + Gm43972 lincRNA lincRNA MGP_LPJ_T0014813.1 MGP_LPJ_G0012904.1 mouse_genomes_project 5 9965860 9966623 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015024.1 MGP_LPJ_G0013115.1 mouse_genomes_project 5 93914980 93918370 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008446.1 MGP_LPJ_G0006851.1 mouse_genomes_project 5 149725393 149732871 + D130017N08Rik lincRNA lincRNA MGP_LPJ_T0008447.1 MGP_LPJ_G0006851.1 mouse_genomes_project 5 149726901 149734191 + D130017N08Rik lincRNA lincRNA MGP_LPJ_T0008449.1 MGP_LPJ_G0006851.1 mouse_genomes_project 5 149733352 149735633 + D130017N08Rik lincRNA lincRNA MGP_LPJ_T0008419.1 MGP_LPJ_G0006828.1 mouse_genomes_project 5 137350682 137351841 + Gm28616 lincRNA lincRNA MGP_LPJ_T0098269.1 MGP_LPJ_G0036550.1 mouse_genomes_project 5 52850421 52850535 - n-R5s172 rRNA rRNA MGP_LPJ_T0099621.1 MGP_LPJ_G0037884.1 mouse_genomes_project 5 130959884 130959991 - Gm24839 snRNA snRNA MGP_LPJ_T0101352.1 MGP_LPJ_G0039555.1 mouse_genomes_project 5 44976563 44977440 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0014971.1 MGP_LPJ_G0013062.1 mouse_genomes_project 5 69780927 69781519 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010728.1 MGP_LPJ_G0008846.1 mouse_genomes_project 5 119045413 119045474 + Mir7029 miRNA miRNA MGP_LPJ_T0075754.1 MGP_LPJ_G0030297.1 mouse_genomes_project 5 154248707 154250902 + Pomp protein_coding retained_intron MGP_LPJ_T0075755.1 MGP_LPJ_G0030297.1 mouse_genomes_project 5 154248723 154261197 + MGP_LPJ_P0075755 Pomp protein_coding protein_coding MGP_LPJ_T0075756.1 MGP_LPJ_G0030297.1 mouse_genomes_project 5 154248759 154263665 + MGP_LPJ_P0075756 Pomp protein_coding protein_coding MGP_LPJ_T0075757.1 MGP_LPJ_G0030297.1 mouse_genomes_project 5 154258518 154263745 + Pomp protein_coding processed_transcript MGP_LPJ_T0075758.1 MGP_LPJ_G0030297.1 mouse_genomes_project 5 154260567 154263703 + Pomp protein_coding retained_intron MGP_LPJ_T0072754.1 MGP_LPJ_G0029719.1 mouse_genomes_project 5 107365778 107413764 - MGP_LPJ_P0072754 Abcg3 protein_coding protein_coding MGP_LPJ_T0072755.1 MGP_LPJ_G0029719.1 mouse_genomes_project 5 107366400 107408882 - MGP_LPJ_P0072755 Abcg3 protein_coding protein_coding MGP_LPJ_T0074504.1 MGP_LPJ_G0030048.1 mouse_genomes_project 5 134895065 134928694 + Tyw1 protein_coding retained_intron MGP_LPJ_T0074505.1 MGP_LPJ_G0030048.1 mouse_genomes_project 5 134896481 134921062 + MGP_LPJ_P0074505 Tyw1 protein_coding protein_coding MGP_LPJ_T0074506.1 MGP_LPJ_G0030048.1 mouse_genomes_project 5 134896481 134987146 + MGP_LPJ_P0074506 Tyw1 protein_coding protein_coding MGP_LPJ_T0074507.1 MGP_LPJ_G0030048.1 mouse_genomes_project 5 134898337 134912720 + MGP_LPJ_P0074507 Tyw1 protein_coding protein_coding MGP_LPJ_T0100858.1 MGP_LPJ_G0039121.1 mouse_genomes_project 5 113722721 113722854 - Gm26079 snoRNA snoRNA MGP_LPJ_T0010761.1 MGP_LPJ_G0008879.1 mouse_genomes_project 5 153628508 153628618 - Mir7k miRNA miRNA MGP_LPJ_T0001856.1 MGP_LPJ_G0001767.1 mouse_genomes_project 5 129845577 129848432 + TEC TEC MGP_LPJ_T0074118.1 MGP_LPJ_G0029980.1 mouse_genomes_project 5 128027332 128049471 - MGP_LPJ_P0074118 Rsrc2 protein_coding protein_coding MGP_LPJ_T0074119.1 MGP_LPJ_G0029980.1 mouse_genomes_project 5 128027634 128042950 - Rsrc2 protein_coding processed_transcript MGP_LPJ_T0074120.1 MGP_LPJ_G0029980.1 mouse_genomes_project 5 128027917 128049520 - MGP_LPJ_P0074120 Rsrc2 protein_coding protein_coding MGP_LPJ_T0074121.1 MGP_LPJ_G0029980.1 mouse_genomes_project 5 128027928 128049486 - MGP_LPJ_P0074121 Rsrc2 protein_coding protein_coding MGP_LPJ_T0074122.1 MGP_LPJ_G0029980.1 mouse_genomes_project 5 128027994 128042975 - MGP_LPJ_P0074122 Rsrc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074123.1 MGP_LPJ_G0029980.1 mouse_genomes_project 5 128027994 128043765 - MGP_LPJ_P0074123 Rsrc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074124.1 MGP_LPJ_G0029980.1 mouse_genomes_project 5 128027994 128043765 - MGP_LPJ_P0074124 Rsrc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074125.1 MGP_LPJ_G0029980.1 mouse_genomes_project 5 128028157 128032759 - Rsrc2 protein_coding retained_intron MGP_LPJ_T0074126.1 MGP_LPJ_G0029980.1 mouse_genomes_project 5 128029436 128049492 - MGP_LPJ_P0074126 Rsrc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074127.1 MGP_LPJ_G0029980.1 mouse_genomes_project 5 128032433 128049518 - MGP_LPJ_P0074127 Rsrc2 protein_coding protein_coding MGP_LPJ_T0074128.1 MGP_LPJ_G0029980.1 mouse_genomes_project 5 128032667 128049488 - MGP_LPJ_P0074128 Rsrc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074129.1 MGP_LPJ_G0029980.1 mouse_genomes_project 5 128032667 128049487 - MGP_LPJ_P0074129 Rsrc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074130.1 MGP_LPJ_G0029980.1 mouse_genomes_project 5 128033898 128045692 - Rsrc2 protein_coding retained_intron MGP_LPJ_T0074131.1 MGP_LPJ_G0029980.1 mouse_genomes_project 5 128033953 128041916 - Rsrc2 protein_coding retained_intron MGP_LPJ_T0074132.1 MGP_LPJ_G0029980.1 mouse_genomes_project 5 128035682 128049477 - MGP_LPJ_P0074132 Rsrc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074133.1 MGP_LPJ_G0029980.1 mouse_genomes_project 5 128035729 128049518 - MGP_LPJ_P0074133 Rsrc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074134.1 MGP_LPJ_G0029980.1 mouse_genomes_project 5 128038705 128049475 - MGP_LPJ_P0074134 Rsrc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074135.1 MGP_LPJ_G0029980.1 mouse_genomes_project 5 128040991 128049473 - Rsrc2 protein_coding processed_transcript MGP_LPJ_T0074136.1 MGP_LPJ_G0029980.1 mouse_genomes_project 5 128042112 128049487 - Rsrc2 protein_coding retained_intron MGP_LPJ_T0074137.1 MGP_LPJ_G0029980.1 mouse_genomes_project 5 128042112 128049487 - Rsrc2 protein_coding retained_intron MGP_LPJ_T0074138.1 MGP_LPJ_G0029980.1 mouse_genomes_project 5 128043688 128045353 - Rsrc2 protein_coding retained_intron MGP_LPJ_T0001834.1 MGP_LPJ_G0001746.1 mouse_genomes_project 5 126317313 126319651 + TEC TEC MGP_LPJ_T0073002.1 MGP_LPJ_G0029776.1 mouse_genomes_project 5 112830114 112830177 + MGP_LPJ_P0073002 Gm21836 protein_coding protein_coding MGP_LPJ_T0015139.1 MGP_LPJ_G0013230.1 mouse_genomes_project 5 149061079 149061461 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014803.1 MGP_LPJ_G0012894.1 mouse_genomes_project 5 6110820 6111015 + processed_pseudogene processed_pseudogene MGP_LPJ_T0073869.1 MGP_LPJ_G0029943.1 mouse_genomes_project 5 126247383 126251701 + MGP_LPJ_P0073869 Myl2 protein_coding protein_coding MGP_LPJ_T0073870.1 MGP_LPJ_G0029943.1 mouse_genomes_project 5 126247453 126253264 + MGP_LPJ_P0073870 Myl2 protein_coding protein_coding MGP_LPJ_T0073871.1 MGP_LPJ_G0029943.1 mouse_genomes_project 5 126247458 126251444 + MGP_LPJ_P0073871 Myl2 protein_coding protein_coding MGP_LPJ_T0073872.1 MGP_LPJ_G0029943.1 mouse_genomes_project 5 126247587 126249180 + Myl2 protein_coding processed_transcript MGP_LPJ_T0073873.1 MGP_LPJ_G0029943.1 mouse_genomes_project 5 126248006 126250336 + MGP_LPJ_P0073873 Myl2 protein_coding protein_coding MGP_LPJ_T0073874.1 MGP_LPJ_G0029943.1 mouse_genomes_project 5 126248223 126251114 + MGP_LPJ_P0073874 Myl2 protein_coding protein_coding MGP_LPJ_T0073875.1 MGP_LPJ_G0029943.1 mouse_genomes_project 5 126249606 126253256 + Myl2 protein_coding processed_transcript MGP_LPJ_T0073876.1 MGP_LPJ_G0029943.1 mouse_genomes_project 5 126249608 126253262 + Myl2 protein_coding processed_transcript MGP_LPJ_T0073877.1 MGP_LPJ_G0029943.1 mouse_genomes_project 5 126250320 126251411 + MGP_LPJ_P0073877 Myl2 protein_coding protein_coding MGP_LPJ_T0072280.1 MGP_LPJ_G0029610.1 mouse_genomes_project 5 89948870 89950499 + MGP_LPJ_P0072280 Utp3 protein_coding protein_coding MGP_LPJ_T0074908.1 MGP_LPJ_G0030116.1 mouse_genomes_project 5 142125689 142131575 - MGP_LPJ_P0074908 Znhit1 protein_coding protein_coding MGP_LPJ_T0074909.1 MGP_LPJ_G0030116.1 mouse_genomes_project 5 142125714 142130379 - MGP_LPJ_P0074909 Znhit1 protein_coding protein_coding MGP_LPJ_T0074910.1 MGP_LPJ_G0030116.1 mouse_genomes_project 5 142125719 142130376 - MGP_LPJ_P0074910 Znhit1 protein_coding protein_coding MGP_LPJ_T0074911.1 MGP_LPJ_G0030116.1 mouse_genomes_project 5 142125846 142130779 - MGP_LPJ_P0074911 Znhit1 protein_coding protein_coding MGP_LPJ_T0074912.1 MGP_LPJ_G0030116.1 mouse_genomes_project 5 142126465 142131055 - MGP_LPJ_P0074912 Znhit1 protein_coding protein_coding MGP_LPJ_T0001820.1 MGP_LPJ_G0001732.1 mouse_genomes_project 5 122401724 122404417 + TEC TEC MGP_LPJ_T0004766.1 MGP_LPJ_G0004121.1 mouse_genomes_project 5 101718069 101725976 + Gm16226 antisense antisense MGP_LPJ_T0004767.1 MGP_LPJ_G0004121.1 mouse_genomes_project 5 101718069 101753375 + Gm16226 antisense antisense MGP_LPJ_T0004768.1 MGP_LPJ_G0004121.1 mouse_genomes_project 5 101718074 101753377 + Gm16226 antisense antisense MGP_LPJ_T0004769.1 MGP_LPJ_G0004121.1 mouse_genomes_project 5 101718098 101753373 + Gm16226 antisense antisense MGP_LPJ_T0075710.1 MGP_LPJ_G0030288.1 mouse_genomes_project 5 153334921 153396109 - MGP_LPJ_P0075710 Lnx2 protein_coding protein_coding MGP_LPJ_T0075711.1 MGP_LPJ_G0030288.1 mouse_genomes_project 5 153337649 153338421 - Lnx2 protein_coding processed_transcript MGP_LPJ_T0008199.1 MGP_LPJ_G0006683.1 mouse_genomes_project 5 78124935 78173106 + Gm34728 lincRNA lincRNA MGP_LPJ_T0070517.1 MGP_LPJ_G0029298.1 mouse_genomes_project 5 29311246 29313760 + MGP_LPJ_P0070517 Agbl5 protein_coding protein_coding MGP_LPJ_T0070518.1 MGP_LPJ_G0029298.1 mouse_genomes_project 5 29311404 29319240 + MGP_LPJ_P0070518 Agbl5 protein_coding protein_coding MGP_LPJ_T0070519.1 MGP_LPJ_G0029298.1 mouse_genomes_project 5 29311487 29329611 + MGP_LPJ_P0070519 Agbl5 protein_coding protein_coding MGP_LPJ_T0070520.1 MGP_LPJ_G0029298.1 mouse_genomes_project 5 29311493 29316386 + Agbl5 protein_coding retained_intron MGP_LPJ_T0070521.1 MGP_LPJ_G0029298.1 mouse_genomes_project 5 29311508 29329313 + Agbl5 protein_coding retained_intron MGP_LPJ_T0070522.1 MGP_LPJ_G0029298.1 mouse_genomes_project 5 29311521 29318637 + Agbl5 protein_coding retained_intron MGP_LPJ_T0070523.1 MGP_LPJ_G0029298.1 mouse_genomes_project 5 29311521 29329312 + MGP_LPJ_P0070523 Agbl5 protein_coding protein_coding MGP_LPJ_T0070524.1 MGP_LPJ_G0029298.1 mouse_genomes_project 5 29311526 29326133 + MGP_LPJ_P0070524 Agbl5 protein_coding protein_coding MGP_LPJ_T0070525.1 MGP_LPJ_G0029298.1 mouse_genomes_project 5 29311553 29329312 + MGP_LPJ_P0070525 Agbl5 protein_coding nonsense_mediated_decay MGP_LPJ_T0070526.1 MGP_LPJ_G0029298.1 mouse_genomes_project 5 29311558 29326133 + MGP_LPJ_P0070526 Agbl5 protein_coding protein_coding MGP_LPJ_T0070527.1 MGP_LPJ_G0029298.1 mouse_genomes_project 5 29311558 29329312 + MGP_LPJ_P0070527 Agbl5 protein_coding protein_coding MGP_LPJ_T0070528.1 MGP_LPJ_G0029298.1 mouse_genomes_project 5 29311878 29314422 + MGP_LPJ_P0070528 Agbl5 protein_coding protein_coding MGP_LPJ_T0070529.1 MGP_LPJ_G0029298.1 mouse_genomes_project 5 29312834 29315000 + Agbl5 protein_coding processed_transcript MGP_LPJ_T0070530.1 MGP_LPJ_G0029298.1 mouse_genomes_project 5 29316756 29318647 + Agbl5 protein_coding retained_intron MGP_LPJ_T0070532.1 MGP_LPJ_G0029298.1 mouse_genomes_project 5 29317691 29318668 + Agbl5 protein_coding retained_intron MGP_LPJ_T0070533.1 MGP_LPJ_G0029298.1 mouse_genomes_project 5 29318485 29328556 + MGP_LPJ_P0070533 Agbl5 protein_coding protein_coding MGP_LPJ_T0072672.1 MGP_LPJ_G0029698.1 mouse_genomes_project 5 104001468 104155739 - MGP_LPJ_P0072672 Wdfy3 protein_coding unknown_likely_coding MGP_LPJ_T0072673.1 MGP_LPJ_G0029698.1 mouse_genomes_project 5 104001469 104252117 - MGP_LPJ_P0072673 Wdfy3 protein_coding protein_coding MGP_LPJ_T0072674.1 MGP_LPJ_G0029698.1 mouse_genomes_project 5 104003452 104020010 - Wdfy3 protein_coding retained_intron MGP_LPJ_T0072675.1 MGP_LPJ_G0029698.1 mouse_genomes_project 5 104004673 104155739 - MGP_LPJ_P0072675 Wdfy3 protein_coding protein_coding MGP_LPJ_T0072676.1 MGP_LPJ_G0029698.1 mouse_genomes_project 5 104095787 104103836 - MGP_LPJ_P0072676 Wdfy3 protein_coding nonsense_mediated_decay MGP_LPJ_T0072677.1 MGP_LPJ_G0029698.1 mouse_genomes_project 5 104102276 104252117 - MGP_LPJ_P0072677 Wdfy3 protein_coding protein_coding MGP_LPJ_T0072678.1 MGP_LPJ_G0029698.1 mouse_genomes_project 5 104108063 104110659 - Wdfy3 protein_coding processed_transcript MGP_LPJ_T0072712.1 MGP_LPJ_G0029704.1 mouse_genomes_project 5 105905494 106039974 + Aff1 protein_coding retained_intron MGP_LPJ_T0072713.1 MGP_LPJ_G0029704.1 mouse_genomes_project 5 105973970 106080729 + MGP_LPJ_P0072713 Aff1 protein_coding protein_coding MGP_LPJ_T0072714.1 MGP_LPJ_G0029704.1 mouse_genomes_project 5 105974374 106067343 + MGP_LPJ_P0072714 Aff1 protein_coding protein_coding MGP_LPJ_T0072715.1 MGP_LPJ_G0029704.1 mouse_genomes_project 5 105974383 106080729 + MGP_LPJ_P0072715 Aff1 protein_coding protein_coding MGP_LPJ_T0072716.1 MGP_LPJ_G0029704.1 mouse_genomes_project 5 106005225 106035130 + Aff1 protein_coding retained_intron MGP_LPJ_T0001831.1 MGP_LPJ_G0001743.1 mouse_genomes_project 5 125821957 125825051 + TEC TEC MGP_LPJ_T0001630.1 MGP_LPJ_G0001544.1 mouse_genomes_project 5 55379157 55382874 - TEC TEC MGP_LPJ_T0004683.1 MGP_LPJ_G0004055.1 mouse_genomes_project 5 30507391 30512279 - Gm17130 antisense antisense MGP_LPJ_T0014898.1 MGP_LPJ_G0012989.1 mouse_genomes_project 5 34276164 34277951 + processed_pseudogene processed_pseudogene MGP_LPJ_T0073353.1 MGP_LPJ_G0029843.1 mouse_genomes_project 5 117952555 117989786 - MGP_LPJ_P0073353 Trpv4 protein_coding protein_coding MGP_LPJ_T0073354.1 MGP_LPJ_G0029843.1 mouse_genomes_project 5 117952557 117989783 - MGP_LPJ_P0073354 Trpv4 protein_coding protein_coding MGP_LPJ_T0073355.1 MGP_LPJ_G0029843.1 mouse_genomes_project 5 117952560 117967749 - Trpv4 protein_coding retained_intron MGP_LPJ_T0073356.1 MGP_LPJ_G0029843.1 mouse_genomes_project 5 117953056 117976434 - MGP_LPJ_P0073356 Trpv4 protein_coding protein_coding MGP_LPJ_T0073357.1 MGP_LPJ_G0029843.1 mouse_genomes_project 5 117953056 117976434 - MGP_LPJ_P0073357 Trpv4 protein_coding protein_coding MGP_LPJ_T0073358.1 MGP_LPJ_G0029843.1 mouse_genomes_project 5 117953056 117976434 - MGP_LPJ_P0073358 Trpv4 protein_coding protein_coding MGP_LPJ_T0073359.1 MGP_LPJ_G0029843.1 mouse_genomes_project 5 117958261 117962155 - Trpv4 protein_coding retained_intron MGP_LPJ_T0008496.1 MGP_LPJ_G0006887.1 mouse_genomes_project 5 157475997 157495798 - Gm43298 lincRNA lincRNA MGP_LPJ_T0004858.1 MGP_LPJ_G0004181.1 mouse_genomes_project 5 128574830 128582246 + Pitpnm2os1 antisense antisense MGP_LPJ_T0001891.1 MGP_LPJ_G0001802.1 mouse_genomes_project 5 137000952 137002282 - TEC TEC MGP_LPJ_T0099616.1 MGP_LPJ_G0037879.1 mouse_genomes_project 5 126684934 126685035 + Gm22965 snRNA snRNA MGP_LPJ_T0073146.1 MGP_LPJ_G0029801.1 mouse_genomes_project 5 114827880 114828531 + MGP_LPJ_P0073146 Gm26897 protein_coding protein_coding MGP_LPJ_T0072423.1 MGP_LPJ_G0029648.1 mouse_genomes_project 5 93830260 93857643 - MGP_LPJ_P0072423 Sdad1 protein_coding protein_coding MGP_LPJ_T0072424.1 MGP_LPJ_G0029648.1 mouse_genomes_project 5 93832992 93857513 - MGP_LPJ_P0072424 Sdad1 protein_coding protein_coding MGP_LPJ_T0072425.1 MGP_LPJ_G0029648.1 mouse_genomes_project 5 93838442 93843756 - Sdad1 protein_coding retained_intron MGP_LPJ_T0072426.1 MGP_LPJ_G0029648.1 mouse_genomes_project 5 93839269 93847884 - Sdad1 protein_coding retained_intron MGP_LPJ_T0072427.1 MGP_LPJ_G0029648.1 mouse_genomes_project 5 93849202 93857608 - Sdad1 protein_coding retained_intron MGP_LPJ_T0072428.1 MGP_LPJ_G0029648.1 mouse_genomes_project 5 93851228 93852272 - Sdad1 protein_coding retained_intron MGP_LPJ_T0072429.1 MGP_LPJ_G0029648.1 mouse_genomes_project 5 93853348 93858099 - MGP_LPJ_P0072429 Sdad1 protein_coding protein_coding MGP_LPJ_T0099587.1 MGP_LPJ_G0037850.1 mouse_genomes_project 5 80639709 80639858 - Gm23429 snRNA snRNA MGP_LPJ_T0098281.1 MGP_LPJ_G0036562.1 mouse_genomes_project 5 155206694 155206812 - n-R5s179 rRNA rRNA MGP_LPJ_T0074636.1 MGP_LPJ_G0030064.1 mouse_genomes_project 5 139519875 139543190 - MGP_LPJ_P0074636 Eif4h protein_coding protein_coding MGP_LPJ_T0074637.1 MGP_LPJ_G0030064.1 mouse_genomes_project 5 139520031 139543047 - MGP_LPJ_P0074637 Eif4h protein_coding protein_coding MGP_LPJ_T0074638.1 MGP_LPJ_G0030064.1 mouse_genomes_project 5 139524033 139543025 - Eif4h protein_coding retained_intron MGP_LPJ_T0074639.1 MGP_LPJ_G0030064.1 mouse_genomes_project 5 139525036 139543002 - Eif4h protein_coding retained_intron MGP_LPJ_T0074640.1 MGP_LPJ_G0030064.1 mouse_genomes_project 5 139541161 139543010 - Eif4h protein_coding retained_intron MGP_LPJ_T0011606.1 MGP_LPJ_G0009724.1 mouse_genomes_project 5 30365959 30366261 + Gm24436 misc_RNA misc_RNA MGP_LPJ_T0008458.1 MGP_LPJ_G0006861.1 mouse_genomes_project 5 154346519 154353460 - Gm15721 lincRNA lincRNA MGP_LPJ_T0071943.1 MGP_LPJ_G0029531.1 mouse_genomes_project 5 74690082 74695262 + MGP_LPJ_P0071943 Rasl11b protein_coding protein_coding MGP_LPJ_T0071944.1 MGP_LPJ_G0029531.1 mouse_genomes_project 5 74690241 74691087 + Rasl11b protein_coding retained_intron MGP_LPJ_T0071945.1 MGP_LPJ_G0029531.1 mouse_genomes_project 5 74693671 74695253 + Rasl11b protein_coding retained_intron MGP_LPJ_T0004685.1 MGP_LPJ_G0004057.1 mouse_genomes_project 5 31034134 31105629 - antisense antisense MGP_LPJ_T0008079.1 MGP_LPJ_G0006594.1 mouse_genomes_project 5 23694838 23697310 + 4831440E17Rik lincRNA lincRNA MGP_LPJ_T0010683.1 MGP_LPJ_G0008801.1 mouse_genomes_project 5 4989310 4989421 + Gm22196 miRNA miRNA MGP_LPJ_T0011630.1 MGP_LPJ_G0009748.1 mouse_genomes_project 5 155761707 155762000 - Gm24105 misc_RNA misc_RNA MGP_LPJ_T0070313.1 MGP_LPJ_G0029255.1 mouse_genomes_project 5 22960589 23006091 - MGP_LPJ_P0070313 Rheb protein_coding protein_coding MGP_LPJ_T0070314.1 MGP_LPJ_G0029255.1 mouse_genomes_project 5 22961433 22972925 - Rheb protein_coding retained_intron MGP_LPJ_T0070315.1 MGP_LPJ_G0029255.1 mouse_genomes_project 5 22969103 23005895 - Rheb protein_coding retained_intron MGP_LPJ_T0070316.1 MGP_LPJ_G0029255.1 mouse_genomes_project 5 23003458 23006076 - Rheb protein_coding retained_intron MGP_LPJ_T0008131.1 MGP_LPJ_G0006626.1 mouse_genomes_project 5 42100842 42105167 - Gm42711 lincRNA lincRNA MGP_LPJ_T0004653.1 MGP_LPJ_G0004031.1 mouse_genomes_project 5 476126 476860 - Gm43825 antisense antisense MGP_LPJ_T0071455.1 MGP_LPJ_G0029444.1 mouse_genomes_project 5 51797279 51806062 + MGP_LPJ_P0071455 Sod3 protein_coding protein_coding MGP_LPJ_T0098630.1 MGP_LPJ_G0036904.1 mouse_genomes_project 5 120096532 120098422 - sense_intronic sense_intronic MGP_LPJ_T0001605.1 MGP_LPJ_G0001519.1 mouse_genomes_project 5 48418403 48422558 - TEC TEC MGP_LPJ_T0001511.1 MGP_LPJ_G0001427.1 mouse_genomes_project 5 25517103 25519700 + TEC TEC MGP_LPJ_T0071459.1 MGP_LPJ_G0029446.1 mouse_genomes_project 5 51975514 52008260 - MGP_LPJ_P0071459 Lgi2 protein_coding protein_coding MGP_LPJ_T0071460.1 MGP_LPJ_G0029446.1 mouse_genomes_project 5 51975514 52008419 - MGP_LPJ_P0071460 Lgi2 protein_coding protein_coding MGP_LPJ_T0008125.1 MGP_LPJ_G0006622.1 mouse_genomes_project 5 38369905 38394165 + Gm42524 lincRNA lincRNA MGP_LPJ_T0073351.1 MGP_LPJ_G0029842.1 mouse_genomes_project 5 117890980 117943622 + MGP_LPJ_P0073351 Fam222a protein_coding protein_coding MGP_LPJ_T0073352.1 MGP_LPJ_G0029842.1 mouse_genomes_project 5 117890981 117925072 + Fam222a protein_coding processed_transcript MGP_LPJ_T0014998.1 MGP_LPJ_G0013089.1 mouse_genomes_project 5 84110325 84110692 - processed_pseudogene processed_pseudogene MGP_LPJ_T0074395.1 MGP_LPJ_G0030028.1 mouse_genomes_project 5 134116504 134187603 + MGP_LPJ_P0074395 Sfswap protein_coding protein_coding MGP_LPJ_T0074396.1 MGP_LPJ_G0030028.1 mouse_genomes_project 5 134116523 134185857 + MGP_LPJ_P0074396 Sfswap protein_coding nonsense_mediated_decay MGP_LPJ_T0074397.1 MGP_LPJ_G0030028.1 mouse_genomes_project 5 134116529 134119926 + Sfswap protein_coding retained_intron MGP_LPJ_T0074398.1 MGP_LPJ_G0030028.1 mouse_genomes_project 5 134116534 134187600 + Sfswap protein_coding processed_transcript MGP_LPJ_T0074399.1 MGP_LPJ_G0030028.1 mouse_genomes_project 5 134116732 134119665 + MGP_LPJ_P0074399 Sfswap protein_coding nonsense_mediated_decay MGP_LPJ_T0074400.1 MGP_LPJ_G0030028.1 mouse_genomes_project 5 134117677 134118332 + Sfswap protein_coding TEC MGP_LPJ_T0074401.1 MGP_LPJ_G0030028.1 mouse_genomes_project 5 134118442 134119418 + Sfswap protein_coding processed_transcript MGP_LPJ_T0074402.1 MGP_LPJ_G0030028.1 mouse_genomes_project 5 134119257 134120171 + Sfswap protein_coding retained_intron MGP_LPJ_T0074403.1 MGP_LPJ_G0030028.1 mouse_genomes_project 5 134119379 134171022 + MGP_LPJ_P0074403 Sfswap protein_coding unknown_likely_coding MGP_LPJ_T0074404.1 MGP_LPJ_G0030028.1 mouse_genomes_project 5 134119624 134128400 + Sfswap protein_coding retained_intron MGP_LPJ_T0074405.1 MGP_LPJ_G0030028.1 mouse_genomes_project 5 134157731 134167131 + MGP_LPJ_P0074405 Sfswap protein_coding nonsense_mediated_decay MGP_LPJ_T0074406.1 MGP_LPJ_G0030028.1 mouse_genomes_project 5 134165209 134187600 + Sfswap protein_coding retained_intron MGP_LPJ_T0074407.1 MGP_LPJ_G0030028.1 mouse_genomes_project 5 134167046 134175740 + Sfswap protein_coding processed_transcript MGP_LPJ_T0074408.1 MGP_LPJ_G0030028.1 mouse_genomes_project 5 134176399 134187603 + Sfswap protein_coding retained_intron MGP_LPJ_T0074409.1 MGP_LPJ_G0030028.1 mouse_genomes_project 5 134176740 134186231 + Sfswap protein_coding retained_intron MGP_LPJ_T0074410.1 MGP_LPJ_G0030028.1 mouse_genomes_project 5 134186936 134187603 + Sfswap protein_coding retained_intron MGP_LPJ_T0008139.1 MGP_LPJ_G0006634.1 mouse_genomes_project 5 44166356 44609060 - lincRNA lincRNA MGP_LPJ_T0008140.1 MGP_LPJ_G0006634.1 mouse_genomes_project 5 44275025 44342164 - lincRNA lincRNA MGP_LPJ_T0074983.1 MGP_LPJ_G0030132.1 mouse_genomes_project 5 142725391 142726379 - MGP_LPJ_P0074983 Pop7 protein_coding protein_coding MGP_LPJ_T0074984.1 MGP_LPJ_G0030132.1 mouse_genomes_project 5 142725392 142726472 - MGP_LPJ_P0074984 Pop7 protein_coding protein_coding MGP_LPJ_T0004706.1 MGP_LPJ_G0004074.1 mouse_genomes_project 5 43211811 43213883 + Gm16401 antisense antisense MGP_LPJ_T0004707.1 MGP_LPJ_G0004074.1 mouse_genomes_project 5 43211811 43213885 + Gm16401 antisense antisense MGP_LPJ_T0073084.1 MGP_LPJ_G0029791.1 mouse_genomes_project 5 113678812 113683841 - MGP_LPJ_P0073084 Noc4l protein_coding protein_coding MGP_LPJ_T0073085.1 MGP_LPJ_G0029791.1 mouse_genomes_project 5 113679241 113680412 - Noc4l protein_coding retained_intron MGP_LPJ_T0073086.1 MGP_LPJ_G0029791.1 mouse_genomes_project 5 113681464 113683683 - Noc4l protein_coding retained_intron MGP_LPJ_T0073087.1 MGP_LPJ_G0029791.1 mouse_genomes_project 5 113681638 113683772 - Noc4l protein_coding retained_intron MGP_LPJ_T0073088.1 MGP_LPJ_G0029791.1 mouse_genomes_project 5 113681758 113683790 - Noc4l protein_coding retained_intron MGP_LPJ_T0073089.1 MGP_LPJ_G0029791.1 mouse_genomes_project 5 113683437 113683804 - Noc4l protein_coding retained_intron MGP_LPJ_T0008362.1 MGP_LPJ_G0006797.1 mouse_genomes_project 5 124148042 124154503 - Gm42654 lincRNA lincRNA MGP_LPJ_T0008363.1 MGP_LPJ_G0006797.1 mouse_genomes_project 5 124148050 124151094 - Gm42654 lincRNA lincRNA MGP_LPJ_T0014889.1 MGP_LPJ_G0012980.1 mouse_genomes_project 5 31712455 31712915 + processed_pseudogene processed_pseudogene MGP_LPJ_T0070056.1 MGP_LPJ_G0029206.1 mouse_genomes_project 5 15788304 15846602 + MGP_LPJ_P0070056 Gnat3 protein_coding protein_coding MGP_LPJ_T0008408.1 MGP_LPJ_G0006824.1 mouse_genomes_project 5 133046995 133048492 - 4930573I07Rik lincRNA lincRNA MGP_LPJ_T0008409.1 MGP_LPJ_G0006824.1 mouse_genomes_project 5 133046997 133048515 - 4930573I07Rik lincRNA lincRNA MGP_LPJ_T0075414.1 MGP_LPJ_G0030221.1 mouse_genomes_project 5 148760516 148790904 - MGP_LPJ_P0075414 Fbxl18 protein_coding protein_coding MGP_LPJ_T0075415.1 MGP_LPJ_G0030221.1 mouse_genomes_project 5 148765340 148766449 - Fbxl18 protein_coding retained_intron MGP_LPJ_T0075416.1 MGP_LPJ_G0030221.1 mouse_genomes_project 5 148765353 148790721 - MGP_LPJ_P0075416 Fbxl18 protein_coding protein_coding MGP_LPJ_T0075417.1 MGP_LPJ_G0030221.1 mouse_genomes_project 5 148765616 148766058 - Fbxl18 protein_coding processed_transcript MGP_LPJ_T0075418.1 MGP_LPJ_G0030221.1 mouse_genomes_project 5 148775827 148790904 - Fbxl18 protein_coding retained_intron MGP_LPJ_T0018165.1 MGP_LPJ_G0015538.1 mouse_genomes_project 5 157992428 158006233 + processed_transcript retained_intron MGP_LPJ_T0018166.1 MGP_LPJ_G0015538.1 mouse_genomes_project 5 157992462 158020096 + processed_transcript lincRNA MGP_LPJ_T0018167.1 MGP_LPJ_G0015538.1 mouse_genomes_project 5 157992471 158038497 + processed_transcript lincRNA MGP_LPJ_T0018168.1 MGP_LPJ_G0015538.1 mouse_genomes_project 5 158024064 158038290 + processed_transcript lincRNA MGP_LPJ_T0018169.1 MGP_LPJ_G0015538.1 mouse_genomes_project 5 158030456 158067190 + processed_transcript lincRNA MGP_LPJ_T0018170.1 MGP_LPJ_G0015538.1 mouse_genomes_project 5 158030478 158056407 + processed_transcript lincRNA MGP_LPJ_T0015101.1 MGP_LPJ_G0013192.1 mouse_genomes_project 5 126877772 126878171 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001530.1 MGP_LPJ_G0001444.1 mouse_genomes_project 5 31140960 31145737 - TEC TEC MGP_LPJ_T0014899.1 MGP_LPJ_G0012990.1 mouse_genomes_project 5 34658485 34658780 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001728.1 MGP_LPJ_G0001640.1 mouse_genomes_project 5 76317698 76320021 + TEC TEC MGP_LPJ_T0018069.1 MGP_LPJ_G0015506.1 mouse_genomes_project 5 21750383 21751364 - processed_transcript processed_transcript MGP_LPJ_T0075360.1 MGP_LPJ_G0030208.1 mouse_genomes_project 5 146428792 146443124 + MGP_LPJ_P0075360 Brat1 protein_coding protein_coding MGP_LPJ_T0075361.1 MGP_LPJ_G0030208.1 mouse_genomes_project 5 146428804 146443075 + MGP_LPJ_P0075361 Brat1 protein_coding protein_coding MGP_LPJ_T0075362.1 MGP_LPJ_G0030208.1 mouse_genomes_project 5 146428804 146442918 + MGP_LPJ_P0075362 Brat1 protein_coding nonsense_mediated_decay MGP_LPJ_T0075363.1 MGP_LPJ_G0030208.1 mouse_genomes_project 5 146428831 146439680 + Brat1 protein_coding retained_intron MGP_LPJ_T0075364.1 MGP_LPJ_G0030208.1 mouse_genomes_project 5 146428833 146439404 + Brat1 protein_coding retained_intron MGP_LPJ_T0075365.1 MGP_LPJ_G0030208.1 mouse_genomes_project 5 146428847 146443124 + MGP_LPJ_P0075365 Brat1 protein_coding protein_coding MGP_LPJ_T0014810.1 MGP_LPJ_G0012901.1 mouse_genomes_project 5 7861734 7863359 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008255.1 MGP_LPJ_G0006727.1 mouse_genomes_project 5 105553683 105556076 - 5430427N15Rik lincRNA lincRNA MGP_LPJ_T0073608.1 MGP_LPJ_G0029889.1 mouse_genomes_project 5 120962711 120973661 - MGP_LPJ_P0073608 Rfc5 protein_coding protein_coding MGP_LPJ_T0073609.1 MGP_LPJ_G0029889.1 mouse_genomes_project 5 120963013 120973636 - Rfc5 protein_coding retained_intron MGP_LPJ_T0073610.1 MGP_LPJ_G0029889.1 mouse_genomes_project 5 120964225 120965460 - Rfc5 protein_coding retained_intron MGP_LPJ_T0073611.1 MGP_LPJ_G0029889.1 mouse_genomes_project 5 120964449 120964825 - Rfc5 protein_coding retained_intron MGP_LPJ_T0073612.1 MGP_LPJ_G0029889.1 mouse_genomes_project 5 120966342 120971446 - Rfc5 protein_coding retained_intron MGP_LPJ_T0073613.1 MGP_LPJ_G0029889.1 mouse_genomes_project 5 120970895 120973659 - MGP_LPJ_P0073613 Rfc5 protein_coding protein_coding MGP_LPJ_T0073945.1 MGP_LPJ_G0029956.1 mouse_genomes_project 5 126732719 126796478 - MGP_LPJ_P0073945 Ift81 protein_coding protein_coding MGP_LPJ_T0073946.1 MGP_LPJ_G0029956.1 mouse_genomes_project 5 126732723 126743155 - Ift81 protein_coding retained_intron MGP_LPJ_T0073947.1 MGP_LPJ_G0029956.1 mouse_genomes_project 5 126750937 126756163 - Ift81 protein_coding processed_transcript MGP_LPJ_T0073948.1 MGP_LPJ_G0029956.1 mouse_genomes_project 5 126773158 126785456 - MGP_LPJ_P0073948 Ift81 protein_coding protein_coding MGP_LPJ_T0073949.1 MGP_LPJ_G0029956.1 mouse_genomes_project 5 126784140 126796466 - Ift81 protein_coding retained_intron MGP_LPJ_T0073950.1 MGP_LPJ_G0029956.1 mouse_genomes_project 5 126784271 126796405 - MGP_LPJ_P0073950 Ift81 protein_coding protein_coding MGP_LPJ_T0073951.1 MGP_LPJ_G0029956.1 mouse_genomes_project 5 126784306 126796461 - MGP_LPJ_P0073951 Ift81 protein_coding nonsense_mediated_decay MGP_LPJ_T0073952.1 MGP_LPJ_G0029956.1 mouse_genomes_project 5 126786902 126789348 - Ift81 protein_coding retained_intron MGP_LPJ_T0073953.1 MGP_LPJ_G0029956.1 mouse_genomes_project 5 126789011 126796476 - MGP_LPJ_P0073953 Ift81 protein_coding nonsense_mediated_decay MGP_LPJ_T0070113.1 MGP_LPJ_G0029218.1 mouse_genomes_project 5 19512284 19521077 + Lrrc17 protein_coding processed_transcript MGP_LPJ_T0070114.1 MGP_LPJ_G0029218.1 mouse_genomes_project 5 19512288 19544216 + MGP_LPJ_P0070114 Lrrc17 protein_coding protein_coding MGP_LPJ_T0074366.1 MGP_LPJ_G0030021.1 mouse_genomes_project 5 132273435 132954675 - MGP_LPJ_P0074366 Tmem132d protein_coding protein_coding MGP_LPJ_T0074367.1 MGP_LPJ_G0030021.1 mouse_genomes_project 5 132778574 132785649 - Tmem132d protein_coding processed_transcript MGP_LPJ_T0074368.1 MGP_LPJ_G0030021.1 mouse_genomes_project 5 132778679 132785587 - Tmem132d protein_coding processed_transcript MGP_LPJ_T0004756.1 MGP_LPJ_G0004115.1 mouse_genomes_project 5 92527647 92546077 - Gm42532 antisense antisense MGP_LPJ_T0072669.1 MGP_LPJ_G0029696.1 mouse_genomes_project 5 103816538 103823367 - MGP_LPJ_P0072669 Nkx6-1 protein_coding protein_coding MGP_LPJ_T0010689.1 MGP_LPJ_G0008807.1 mouse_genomes_project 5 27708259 27708326 - Gm23801 miRNA miRNA MGP_LPJ_T0074473.1 MGP_LPJ_G0030042.1 mouse_genomes_project 5 134651037 134683558 + MGP_LPJ_P0074473 Crcp protein_coding protein_coding MGP_LPJ_T0074474.1 MGP_LPJ_G0030042.1 mouse_genomes_project 5 134651054 134683601 + Crcp protein_coding processed_transcript MGP_LPJ_T0074475.1 MGP_LPJ_G0030042.1 mouse_genomes_project 5 134651069 134683419 + Crcp protein_coding processed_transcript MGP_LPJ_T0074476.1 MGP_LPJ_G0030042.1 mouse_genomes_project 5 134651126 134684285 + MGP_LPJ_P0074476 Crcp protein_coding protein_coding MGP_LPJ_T0074477.1 MGP_LPJ_G0030042.1 mouse_genomes_project 5 134665695 134683897 + Crcp protein_coding processed_transcript MGP_LPJ_T0102192.1 MGP_LPJ_G0040229.1 mouse_genomes_project 5 130240104 130240787 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0010691.1 MGP_LPJ_G0008809.1 mouse_genomes_project 5 29058342 29058422 + Mir5625 miRNA miRNA MGP_LPJ_T0001929.1 MGP_LPJ_G0001839.1 mouse_genomes_project 5 151308507 151311704 + TEC TEC MGP_LPJ_T0070049.1 MGP_LPJ_G0029205.1 mouse_genomes_project 5 15608405 15673698 - MGP_LPJ_P0070049 protein_coding protein_coding MGP_LPJ_T0070050.1 MGP_LPJ_G0029205.1 mouse_genomes_project 5 15608731 15658304 - MGP_LPJ_P0070050 protein_coding protein_coding MGP_LPJ_T0070051.1 MGP_LPJ_G0029205.1 mouse_genomes_project 5 15609082 15714746 - MGP_LPJ_P0070051 protein_coding protein_coding MGP_LPJ_T0070052.1 MGP_LPJ_G0029205.1 mouse_genomes_project 5 15609084 15673635 - MGP_LPJ_P0070052 protein_coding protein_coding MGP_LPJ_T0070053.1 MGP_LPJ_G0029205.1 mouse_genomes_project 5 15609201 15658325 - MGP_LPJ_P0070053 protein_coding protein_coding MGP_LPJ_T0070054.1 MGP_LPJ_G0029205.1 mouse_genomes_project 5 15613339 15651031 - MGP_LPJ_P0070054 protein_coding unknown_likely_coding MGP_LPJ_T0070055.1 MGP_LPJ_G0029205.1 mouse_genomes_project 5 15635736 15714800 - MGP_LPJ_P0070055 protein_coding protein_coding MGP_LPJ_T0001818.1 MGP_LPJ_G0001730.1 mouse_genomes_project 5 122335147 122340107 + TEC TEC MGP_LPJ_T0008420.1 MGP_LPJ_G0006829.1 mouse_genomes_project 5 137352303 137356893 + Gm42626 lincRNA lincRNA MGP_LPJ_T0075460.1 MGP_LPJ_G0030230.1 mouse_genomes_project 5 149215389 149219985 - MGP_LPJ_P0075460 Zfp853 protein_coding protein_coding MGP_LPJ_T0069947.1 MGP_LPJ_G0029188.1 mouse_genomes_project 5 5520654 5526430 + protein_coding retained_intron MGP_LPJ_T0069948.1 MGP_LPJ_G0029188.1 mouse_genomes_project 5 5520787 5556551 + MGP_LPJ_P0069948 protein_coding unknown_likely_coding MGP_LPJ_T0069949.1 MGP_LPJ_G0029188.1 mouse_genomes_project 5 5522628 5542986 + MGP_LPJ_P0069949 protein_coding protein_coding MGP_LPJ_T0069950.1 MGP_LPJ_G0029188.1 mouse_genomes_project 5 5529824 5530246 + protein_coding retained_intron MGP_LPJ_T0069951.1 MGP_LPJ_G0029188.1 mouse_genomes_project 5 5544316 5550467 + protein_coding retained_intron MGP_LPJ_T0072021.1 MGP_LPJ_G0029546.1 mouse_genomes_project 5 77156402 77197312 + MGP_LPJ_P0072021 Exoc1 protein_coding protein_coding MGP_LPJ_T0072022.1 MGP_LPJ_G0029546.1 mouse_genomes_project 5 77156414 77197303 + MGP_LPJ_P0072022 Exoc1 protein_coding protein_coding MGP_LPJ_T0072023.1 MGP_LPJ_G0029546.1 mouse_genomes_project 5 77156419 77166827 + Exoc1 protein_coding retained_intron MGP_LPJ_T0072024.1 MGP_LPJ_G0029546.1 mouse_genomes_project 5 77156435 77188847 + Exoc1 protein_coding processed_transcript MGP_LPJ_T0072025.1 MGP_LPJ_G0029546.1 mouse_genomes_project 5 77156449 77168200 + Exoc1 protein_coding retained_intron MGP_LPJ_T0072026.1 MGP_LPJ_G0029546.1 mouse_genomes_project 5 77156449 77197305 + MGP_LPJ_P0072026 Exoc1 protein_coding protein_coding MGP_LPJ_T0072027.1 MGP_LPJ_G0029546.1 mouse_genomes_project 5 77169035 77176607 + Exoc1 protein_coding retained_intron MGP_LPJ_T0072028.1 MGP_LPJ_G0029546.1 mouse_genomes_project 5 77179737 77182680 + Exoc1 protein_coding retained_intron MGP_LPJ_T0072029.1 MGP_LPJ_G0029546.1 mouse_genomes_project 5 77187413 77194221 + Exoc1 protein_coding retained_intron MGP_LPJ_T0072030.1 MGP_LPJ_G0029546.1 mouse_genomes_project 5 77188280 77195034 + Exoc1 protein_coding retained_intron MGP_LPJ_T0072031.1 MGP_LPJ_G0029546.1 mouse_genomes_project 5 77188418 77193982 + MGP_LPJ_P0072031 Exoc1 protein_coding protein_coding MGP_LPJ_T0072032.1 MGP_LPJ_G0029546.1 mouse_genomes_project 5 77194899 77197007 + Exoc1 protein_coding retained_intron MGP_LPJ_T0070371.1 MGP_LPJ_G0029270.1 mouse_genomes_project 5 26554180 26598279 - MGP_LPJ_P0070371 protein_coding protein_coding MGP_LPJ_T0070372.1 MGP_LPJ_G0029270.1 mouse_genomes_project 5 26555810 26563368 - MGP_LPJ_P0070372 protein_coding protein_coding MGP_LPJ_T0070373.1 MGP_LPJ_G0029270.1 mouse_genomes_project 5 26558821 26590378 - MGP_LPJ_P0070373 protein_coding protein_coding MGP_LPJ_T0070374.1 MGP_LPJ_G0029270.1 mouse_genomes_project 5 26559129 26563514 - MGP_LPJ_P0070374 protein_coding protein_coding MGP_LPJ_T0070375.1 MGP_LPJ_G0029270.1 mouse_genomes_project 5 26562590 26563709 - MGP_LPJ_P0070375 protein_coding protein_coding MGP_LPJ_T0001579.1 MGP_LPJ_G0001493.1 mouse_genomes_project 5 45711188 45712383 + TEC TEC MGP_LPJ_T0098270.1 MGP_LPJ_G0036551.1 mouse_genomes_project 5 52934766 52934876 + Gm26486 rRNA rRNA MGP_LPJ_T0001809.1 MGP_LPJ_G0001721.1 mouse_genomes_project 5 120020218 120021554 - TEC TEC MGP_LPJ_T0100856.1 MGP_LPJ_G0039119.1 mouse_genomes_project 5 110559928 110560060 + Gm26387 snoRNA snoRNA MGP_LPJ_T0008405.1 MGP_LPJ_G0006821.1 mouse_genomes_project 5 132055405 132056766 + Gm42980 lincRNA lincRNA MGP_LPJ_T0102176.1 MGP_LPJ_G0040213.1 mouse_genomes_project 5 78404845 78406682 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0098267.1 MGP_LPJ_G0036548.1 mouse_genomes_project 5 35893823 35893926 - Gm25551 rRNA rRNA MGP_LPJ_T0074171.1 MGP_LPJ_G0029989.1 mouse_genomes_project 5 128400312 128436486 - MGP_LPJ_P0074171 Abcb9 protein_coding protein_coding MGP_LPJ_T0074172.1 MGP_LPJ_G0029989.1 mouse_genomes_project 5 128401205 128418515 - Abcb9 protein_coding retained_intron MGP_LPJ_T0074173.1 MGP_LPJ_G0029989.1 mouse_genomes_project 5 128411095 128429646 - MGP_LPJ_P0074173 Abcb9 protein_coding nonsense_mediated_decay MGP_LPJ_T0074174.1 MGP_LPJ_G0029989.1 mouse_genomes_project 5 128411099 128429646 - MGP_LPJ_P0074174 Abcb9 protein_coding nonsense_mediated_decay MGP_LPJ_T0074175.1 MGP_LPJ_G0029989.1 mouse_genomes_project 5 128415501 128419204 - Abcb9 protein_coding processed_transcript MGP_LPJ_T0074176.1 MGP_LPJ_G0029989.1 mouse_genomes_project 5 128427318 128436474 - Abcb9 protein_coding retained_intron MGP_LPJ_T0071799.1 MGP_LPJ_G0029504.1 mouse_genomes_project 5 69888238 69905917 - MGP_LPJ_P0071799 Gnpda2 protein_coding nonsense_mediated_decay MGP_LPJ_T0071800.1 MGP_LPJ_G0029504.1 mouse_genomes_project 5 69890127 69907466 - MGP_LPJ_P0071800 Gnpda2 protein_coding protein_coding MGP_LPJ_T0071801.1 MGP_LPJ_G0029504.1 mouse_genomes_project 5 69890296 69905953 - MGP_LPJ_P0071801 Gnpda2 protein_coding protein_coding MGP_LPJ_T0071802.1 MGP_LPJ_G0029504.1 mouse_genomes_project 5 69890301 69907372 - Gnpda2 protein_coding retained_intron MGP_LPJ_T0071803.1 MGP_LPJ_G0029504.1 mouse_genomes_project 5 69890938 69907400 - MGP_LPJ_P0071803 Gnpda2 protein_coding protein_coding MGP_LPJ_T0071804.1 MGP_LPJ_G0029504.1 mouse_genomes_project 5 69891868 69907419 - MGP_LPJ_P0071804 Gnpda2 protein_coding protein_coding MGP_LPJ_T0071805.1 MGP_LPJ_G0029504.1 mouse_genomes_project 5 69900125 69907415 - MGP_LPJ_P0071805 Gnpda2 protein_coding nonsense_mediated_decay MGP_LPJ_T0014890.1 MGP_LPJ_G0012981.1 mouse_genomes_project 5 31836560 31837628 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014873.1 MGP_LPJ_G0012964.1 mouse_genomes_project 5 27911407 27911764 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001669.1 MGP_LPJ_G0001582.1 mouse_genomes_project 5 66036137 66037728 + TEC TEC MGP_LPJ_T0015060.1 MGP_LPJ_G0013151.1 mouse_genomes_project 5 110098879 110099434 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008230.1 MGP_LPJ_G0006710.1 mouse_genomes_project 5 100526056 100539379 - 1700010H22Rik lincRNA lincRNA MGP_LPJ_T0008231.1 MGP_LPJ_G0006710.1 mouse_genomes_project 5 100535225 100539457 - 1700010H22Rik lincRNA lincRNA MGP_LPJ_T0008232.1 MGP_LPJ_G0006710.1 mouse_genomes_project 5 100536641 100539215 - 1700010H22Rik lincRNA lincRNA MGP_LPJ_T0072705.1 MGP_LPJ_G0029703.1 mouse_genomes_project 5 105859657 105867627 - MGP_LPJ_P0072705 1700016H13Rik protein_coding protein_coding MGP_LPJ_T0072706.1 MGP_LPJ_G0029703.1 mouse_genomes_project 5 105860047 105867349 - MGP_LPJ_P0072706 1700016H13Rik protein_coding protein_coding MGP_LPJ_T0072707.1 MGP_LPJ_G0029703.1 mouse_genomes_project 5 105860205 105867340 - MGP_LPJ_P0072707 1700016H13Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0072708.1 MGP_LPJ_G0029703.1 mouse_genomes_project 5 105860211 105867365 - MGP_LPJ_P0072708 1700016H13Rik protein_coding protein_coding MGP_LPJ_T0072709.1 MGP_LPJ_G0029703.1 mouse_genomes_project 5 105860316 105867340 - MGP_LPJ_P0072709 1700016H13Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0072710.1 MGP_LPJ_G0029703.1 mouse_genomes_project 5 105860389 105867340 - MGP_LPJ_P0072710 1700016H13Rik protein_coding protein_coding MGP_LPJ_T0072711.1 MGP_LPJ_G0029703.1 mouse_genomes_project 5 105860389 105867341 - MGP_LPJ_P0072711 1700016H13Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0001725.1 MGP_LPJ_G0001637.1 mouse_genomes_project 5 75099637 75100967 + TEC TEC MGP_LPJ_T0073421.1 MGP_LPJ_G0029855.1 mouse_genomes_project 5 118335162 118362947 - MGP_LPJ_P0073421 Hnf1a protein_coding protein_coding MGP_LPJ_T0073422.1 MGP_LPJ_G0029855.1 mouse_genomes_project 5 118336243 118362724 - MGP_LPJ_P0073422 Hnf1a protein_coding nonsense_mediated_decay MGP_LPJ_T0073423.1 MGP_LPJ_G0029855.1 mouse_genomes_project 5 118338761 118362724 - MGP_LPJ_P0073423 Hnf1a protein_coding nonsense_mediated_decay MGP_LPJ_T0073424.1 MGP_LPJ_G0029855.1 mouse_genomes_project 5 118360583 118362974 - Hnf1a protein_coding retained_intron MGP_LPJ_T0014846.1 MGP_LPJ_G0012937.1 mouse_genomes_project 5 20926648 20927235 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008158.1 MGP_LPJ_G0006651.1 mouse_genomes_project 5 64078435 64083673 + 5830416I19Rik lincRNA lincRNA MGP_LPJ_T0072378.1 MGP_LPJ_G0029638.1 mouse_genomes_project 5 92834961 92881850 - MGP_LPJ_P0072378 Btc protein_coding protein_coding MGP_LPJ_T0072379.1 MGP_LPJ_G0029638.1 mouse_genomes_project 5 92835089 92881678 - Btc protein_coding retained_intron MGP_LPJ_T0072380.1 MGP_LPJ_G0029638.1 mouse_genomes_project 5 92836619 92881716 - MGP_LPJ_P0072380 Btc protein_coding nonsense_mediated_decay MGP_LPJ_T0072381.1 MGP_LPJ_G0029638.1 mouse_genomes_project 5 92843500 92854730 - Btc protein_coding processed_transcript MGP_LPJ_T0010719.1 MGP_LPJ_G0008837.1 mouse_genomes_project 5 102600428 102600504 - Gm23222 miRNA miRNA MGP_LPJ_T0014800.1 MGP_LPJ_G0012891.1 mouse_genomes_project 5 4950638 4951378 + processed_pseudogene processed_pseudogene MGP_LPJ_T0074815.1 MGP_LPJ_G0030102.1 mouse_genomes_project 5 141094674 141106777 + Upk3bl protein_coding processed_transcript MGP_LPJ_T0074816.1 MGP_LPJ_G0030102.1 mouse_genomes_project 5 141097373 141106777 + MGP_LPJ_P0074816 Upk3bl protein_coding protein_coding MGP_LPJ_T0074817.1 MGP_LPJ_G0030102.1 mouse_genomes_project 5 141097449 141106772 + MGP_LPJ_P0074817 Upk3bl protein_coding protein_coding MGP_LPJ_T0074818.1 MGP_LPJ_G0030102.1 mouse_genomes_project 5 141097449 141106779 + MGP_LPJ_P0074818 Upk3bl protein_coding protein_coding MGP_LPJ_T0074819.1 MGP_LPJ_G0030102.1 mouse_genomes_project 5 141100335 141106763 + Upk3bl protein_coding processed_transcript MGP_LPJ_T0074820.1 MGP_LPJ_G0030102.1 mouse_genomes_project 5 141100408 141106765 + MGP_LPJ_P0074820 Upk3bl protein_coding nonsense_mediated_decay MGP_LPJ_T0004669.1 MGP_LPJ_G0004045.1 mouse_genomes_project 5 22487748 22505011 - Gm15587 antisense antisense MGP_LPJ_T0004670.1 MGP_LPJ_G0004045.1 mouse_genomes_project 5 22490745 22505043 - Gm15587 antisense antisense MGP_LPJ_T0015130.1 MGP_LPJ_G0013221.1 mouse_genomes_project 5 144845572 144847403 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001592.1 MGP_LPJ_G0001506.1 mouse_genomes_project 5 48124891 48127807 - TEC TEC MGP_LPJ_T0099590.1 MGP_LPJ_G0037853.1 mouse_genomes_project 5 83857164 83857261 + Gm24129 snRNA snRNA MGP_LPJ_T0072281.1 MGP_LPJ_G0029611.1 mouse_genomes_project 5 89960255 90054555 + MGP_LPJ_P0072281 Rufy3 protein_coding protein_coding MGP_LPJ_T0072282.1 MGP_LPJ_G0029611.1 mouse_genomes_project 5 89960255 90039254 + MGP_LPJ_P0072282 Rufy3 protein_coding protein_coding MGP_LPJ_T0072283.1 MGP_LPJ_G0029611.1 mouse_genomes_project 5 89978577 90037486 + MGP_LPJ_P0072283 Rufy3 protein_coding protein_coding MGP_LPJ_T0072284.1 MGP_LPJ_G0029611.1 mouse_genomes_project 5 89978600 90039255 + MGP_LPJ_P0072284 Rufy3 protein_coding protein_coding MGP_LPJ_T0072285.1 MGP_LPJ_G0029611.1 mouse_genomes_project 5 89978641 89980977 + Rufy3 protein_coding retained_intron MGP_LPJ_T0072286.1 MGP_LPJ_G0029611.1 mouse_genomes_project 5 89978642 90005986 + Rufy3 protein_coding retained_intron MGP_LPJ_T0072287.1 MGP_LPJ_G0029611.1 mouse_genomes_project 5 89978858 90037487 + MGP_LPJ_P0072287 Rufy3 protein_coding protein_coding MGP_LPJ_T0072288.1 MGP_LPJ_G0029611.1 mouse_genomes_project 5 90039470 90052496 + MGP_LPJ_P0072288 Rufy3 protein_coding unknown_likely_coding MGP_LPJ_T0072289.1 MGP_LPJ_G0029611.1 mouse_genomes_project 5 90043249 90044877 + Rufy3 protein_coding retained_intron MGP_LPJ_T0101356.1 MGP_LPJ_G0039559.1 mouse_genomes_project 5 66385847 66386226 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0008081.1 MGP_LPJ_G0006596.1 mouse_genomes_project 5 23877375 23877725 - Gm10062 lincRNA lincRNA MGP_LPJ_T0008083.1 MGP_LPJ_G0006596.1 mouse_genomes_project 5 23877382 23878944 - Gm10062 lincRNA lincRNA MGP_LPJ_T0014795.1 MGP_LPJ_G0012886.1 mouse_genomes_project 5 3410536 3410891 + processed_pseudogene processed_pseudogene MGP_LPJ_T0071377.1 MGP_LPJ_G0029435.1 mouse_genomes_project 5 44722090 44729085 - Fam184b protein_coding retained_intron MGP_LPJ_T0071378.1 MGP_LPJ_G0029435.1 mouse_genomes_project 5 44722090 44844683 - MGP_LPJ_P0071378 Fam184b protein_coding protein_coding MGP_LPJ_T0072479.1 MGP_LPJ_G0029657.1 mouse_genomes_project 5 94237948 94544581 + MGP_LPJ_P0072479 Shroom3 protein_coding protein_coding MGP_LPJ_T0072480.1 MGP_LPJ_G0029657.1 mouse_genomes_project 5 94238138 94544037 + MGP_LPJ_P0072480 Shroom3 protein_coding protein_coding MGP_LPJ_T0072481.1 MGP_LPJ_G0029657.1 mouse_genomes_project 5 94366768 94372017 + Shroom3 protein_coding processed_transcript MGP_LPJ_T0072482.1 MGP_LPJ_G0029657.1 mouse_genomes_project 5 94371998 94408235 + Shroom3 protein_coding processed_transcript MGP_LPJ_T0072483.1 MGP_LPJ_G0029657.1 mouse_genomes_project 5 94485611 94543999 + MGP_LPJ_P0072483 Shroom3 protein_coding protein_coding MGP_LPJ_T0072484.1 MGP_LPJ_G0029657.1 mouse_genomes_project 5 94503352 94518307 + MGP_LPJ_P0072484 Shroom3 protein_coding protein_coding MGP_LPJ_T0072485.1 MGP_LPJ_G0029657.1 mouse_genomes_project 5 94516486 94520099 + Shroom3 protein_coding retained_intron MGP_LPJ_T0072486.1 MGP_LPJ_G0029657.1 mouse_genomes_project 5 94525677 94526588 + Shroom3 protein_coding retained_intron MGP_LPJ_T0072487.1 MGP_LPJ_G0029657.1 mouse_genomes_project 5 94540324 94544065 + Shroom3 protein_coding retained_intron MGP_LPJ_T0100862.1 MGP_LPJ_G0039125.1 mouse_genomes_project 5 134425601 134425732 + Snora15 snoRNA snoRNA MGP_LPJ_T0015135.1 MGP_LPJ_G0013226.1 mouse_genomes_project 5 148122125 148123089 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011622.1 MGP_LPJ_G0009740.1 mouse_genomes_project 5 115354539 115354689 - Gm27627 misc_RNA misc_RNA MGP_LPJ_T0073363.1 MGP_LPJ_G0029845.1 mouse_genomes_project 5 118047141 118061720 + MGP_LPJ_P0073363 Tchp protein_coding protein_coding MGP_LPJ_T0073364.1 MGP_LPJ_G0029845.1 mouse_genomes_project 5 118047200 118048821 + Tchp protein_coding processed_transcript MGP_LPJ_T0073365.1 MGP_LPJ_G0029845.1 mouse_genomes_project 5 118047245 118061720 + Tchp protein_coding retained_intron MGP_LPJ_T0073366.1 MGP_LPJ_G0029845.1 mouse_genomes_project 5 118050445 118053285 + Tchp protein_coding retained_intron MGP_LPJ_T0073367.1 MGP_LPJ_G0029845.1 mouse_genomes_project 5 118054021 118059082 + MGP_LPJ_P0073367 Tchp protein_coding protein_coding MGP_LPJ_T0073368.1 MGP_LPJ_G0029845.1 mouse_genomes_project 5 118054345 118061720 + Tchp protein_coding processed_transcript MGP_LPJ_T0073369.1 MGP_LPJ_G0029845.1 mouse_genomes_project 5 118056945 118058112 + Tchp protein_coding retained_intron MGP_LPJ_T0073370.1 MGP_LPJ_G0029845.1 mouse_genomes_project 5 118059076 118060551 + Tchp protein_coding retained_intron MGP_LPJ_T0014925.1 MGP_LPJ_G0013016.1 mouse_genomes_project 5 50296524 50297089 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014878.1 MGP_LPJ_G0012969.1 mouse_genomes_project 5 28666511 28666878 - processed_pseudogene processed_pseudogene MGP_LPJ_T0071091.1 MGP_LPJ_G0029384.1 mouse_genomes_project 5 34481863 34612320 + MGP_LPJ_P0071091 Ablim2 protein_coding protein_coding MGP_LPJ_T0071092.1 MGP_LPJ_G0029384.1 mouse_genomes_project 5 34481863 34611813 + MGP_LPJ_P0071092 Ablim2 protein_coding protein_coding MGP_LPJ_T0071093.1 MGP_LPJ_G0029384.1 mouse_genomes_project 5 34481907 34611496 + MGP_LPJ_P0071093 Ablim2 protein_coding protein_coding MGP_LPJ_T0071094.1 MGP_LPJ_G0029384.1 mouse_genomes_project 5 34481914 34611812 + MGP_LPJ_P0071094 Ablim2 protein_coding nonsense_mediated_decay MGP_LPJ_T0071095.1 MGP_LPJ_G0029384.1 mouse_genomes_project 5 34481914 34612320 + MGP_LPJ_P0071095 Ablim2 protein_coding protein_coding MGP_LPJ_T0071096.1 MGP_LPJ_G0029384.1 mouse_genomes_project 5 34481949 34611813 + MGP_LPJ_P0071096 Ablim2 protein_coding protein_coding MGP_LPJ_T0071097.1 MGP_LPJ_G0029384.1 mouse_genomes_project 5 34482034 34610766 + MGP_LPJ_P0071097 Ablim2 protein_coding protein_coding MGP_LPJ_T0071098.1 MGP_LPJ_G0029384.1 mouse_genomes_project 5 34538300 34570378 + MGP_LPJ_P0071098 Ablim2 protein_coding protein_coding MGP_LPJ_T0071099.1 MGP_LPJ_G0029384.1 mouse_genomes_project 5 34538367 34610766 + MGP_LPJ_P0071099 Ablim2 protein_coding protein_coding MGP_LPJ_T0071100.1 MGP_LPJ_G0029384.1 mouse_genomes_project 5 34538381 34560281 + MGP_LPJ_P0071100 Ablim2 protein_coding protein_coding MGP_LPJ_T0071101.1 MGP_LPJ_G0029384.1 mouse_genomes_project 5 34555508 34602231 + MGP_LPJ_P0071101 Ablim2 protein_coding protein_coding MGP_LPJ_T0071102.1 MGP_LPJ_G0029384.1 mouse_genomes_project 5 34555539 34568706 + Ablim2 protein_coding retained_intron MGP_LPJ_T0071103.1 MGP_LPJ_G0029384.1 mouse_genomes_project 5 34555539 34585041 + MGP_LPJ_P0071103 Ablim2 protein_coding protein_coding MGP_LPJ_T0071104.1 MGP_LPJ_G0029384.1 mouse_genomes_project 5 34568527 34585368 + MGP_LPJ_P0071104 Ablim2 protein_coding protein_coding MGP_LPJ_T0071105.1 MGP_LPJ_G0029384.1 mouse_genomes_project 5 34575957 34596374 + Ablim2 protein_coding retained_intron MGP_LPJ_T0071106.1 MGP_LPJ_G0029384.1 mouse_genomes_project 5 34584247 34585368 + Ablim2 protein_coding retained_intron MGP_LPJ_T0071107.1 MGP_LPJ_G0029384.1 mouse_genomes_project 5 34585075 34610866 + MGP_LPJ_P0071107 Ablim2 protein_coding protein_coding MGP_LPJ_T0008097.1 MGP_LPJ_G0006606.1 mouse_genomes_project 5 30045668 30047469 - AI839979 lincRNA lincRNA MGP_LPJ_T0008098.1 MGP_LPJ_G0006606.1 mouse_genomes_project 5 30046177 30047463 - AI839979 lincRNA lincRNA MGP_LPJ_T0015038.1 MGP_LPJ_G0013129.1 mouse_genomes_project 5 103447306 103447598 + processed_pseudogene processed_pseudogene MGP_LPJ_T0070411.1 MGP_LPJ_G0029278.1 mouse_genomes_project 5 28119837 28120137 - MGP_LPJ_P0070411 Gm5129 protein_coding protein_coding MGP_LPJ_T0074363.1 MGP_LPJ_G0030020.1 mouse_genomes_project 5 132114191 132180130 + Glt1d1 protein_coding retained_intron MGP_LPJ_T0074364.1 MGP_LPJ_G0030020.1 mouse_genomes_project 5 132114191 132200745 + MGP_LPJ_P0074364 Glt1d1 protein_coding protein_coding MGP_LPJ_T0074365.1 MGP_LPJ_G0030020.1 mouse_genomes_project 5 132142345 132178096 + Glt1d1 protein_coding retained_intron MGP_LPJ_T0001707.1 MGP_LPJ_G0001620.1 mouse_genomes_project 5 72948725 72949715 - TEC TEC MGP_LPJ_T0008407.1 MGP_LPJ_G0006823.1 mouse_genomes_project 5 132973782 132974664 + Gm42500 lincRNA lincRNA MGP_LPJ_T0073941.1 MGP_LPJ_G0029955.1 mouse_genomes_project 5 126631686 126679687 - MGP_LPJ_P0073941 Atp2a2 protein_coding unknown_likely_coding MGP_LPJ_T0073942.1 MGP_LPJ_G0029955.1 mouse_genomes_project 5 126631687 126679897 - MGP_LPJ_P0073942 Atp2a2 protein_coding protein_coding MGP_LPJ_T0073943.1 MGP_LPJ_G0029955.1 mouse_genomes_project 5 126666910 126679623 - Atp2a2 protein_coding processed_transcript MGP_LPJ_T0073944.1 MGP_LPJ_G0029955.1 mouse_genomes_project 5 126666963 126679619 - Atp2a2 protein_coding retained_intron MGP_LPJ_T0075005.1 MGP_LPJ_G0030136.1 mouse_genomes_project 5 142811481 142830411 + MGP_LPJ_P0075005 Tfr2 protein_coding protein_coding MGP_LPJ_T0075006.1 MGP_LPJ_G0030136.1 mouse_genomes_project 5 142811492 142830413 + MGP_LPJ_P0075006 Tfr2 protein_coding protein_coding MGP_LPJ_T0075007.1 MGP_LPJ_G0030136.1 mouse_genomes_project 5 142811505 142813004 + Tfr2 protein_coding retained_intron MGP_LPJ_T0075008.1 MGP_LPJ_G0030136.1 mouse_genomes_project 5 142811510 142830411 + MGP_LPJ_P0075008 Tfr2 protein_coding protein_coding MGP_LPJ_T0075009.1 MGP_LPJ_G0030136.1 mouse_genomes_project 5 142812361 142830397 + MGP_LPJ_P0075009 Tfr2 protein_coding protein_coding MGP_LPJ_T0075010.1 MGP_LPJ_G0030136.1 mouse_genomes_project 5 142812446 142830408 + MGP_LPJ_P0075010 Tfr2 protein_coding protein_coding MGP_LPJ_T0075011.1 MGP_LPJ_G0030136.1 mouse_genomes_project 5 142813092 142816063 + Tfr2 protein_coding retained_intron MGP_LPJ_T0075012.1 MGP_LPJ_G0030136.1 mouse_genomes_project 5 142816155 142819829 + Tfr2 protein_coding retained_intron MGP_LPJ_T0075013.1 MGP_LPJ_G0030136.1 mouse_genomes_project 5 142820913 142822853 + MGP_LPJ_P0075013 Tfr2 protein_coding protein_coding MGP_LPJ_T0075014.1 MGP_LPJ_G0030136.1 mouse_genomes_project 5 142825878 142829921 + Tfr2 protein_coding retained_intron MGP_LPJ_T0075015.1 MGP_LPJ_G0030136.1 mouse_genomes_project 5 142825878 142826703 + Tfr2 protein_coding retained_intron MGP_LPJ_T0075176.1 MGP_LPJ_G0030171.1 mouse_genomes_project 5 143677066 143687801 + MGP_LPJ_P0075176 Stag3 protein_coding protein_coding MGP_LPJ_T0075177.1 MGP_LPJ_G0030171.1 mouse_genomes_project 5 143677335 143709313 + Stag3 protein_coding retained_intron MGP_LPJ_T0075178.1 MGP_LPJ_G0030171.1 mouse_genomes_project 5 143677352 143709310 + Stag3 protein_coding retained_intron MGP_LPJ_T0075179.1 MGP_LPJ_G0030171.1 mouse_genomes_project 5 143677352 143709313 + MGP_LPJ_P0075179 Stag3 protein_coding protein_coding MGP_LPJ_T0075180.1 MGP_LPJ_G0030171.1 mouse_genomes_project 5 143677370 143709313 + MGP_LPJ_P0075180 Stag3 protein_coding protein_coding MGP_LPJ_T0075181.1 MGP_LPJ_G0030171.1 mouse_genomes_project 5 143677382 143687456 + MGP_LPJ_P0075181 Stag3 protein_coding protein_coding MGP_LPJ_T0075182.1 MGP_LPJ_G0030171.1 mouse_genomes_project 5 143696696 143698962 + Stag3 protein_coding processed_transcript MGP_LPJ_T0075183.1 MGP_LPJ_G0030171.1 mouse_genomes_project 5 143701900 143706462 + MGP_LPJ_P0075183 Stag3 protein_coding protein_coding MGP_LPJ_T0075184.1 MGP_LPJ_G0030171.1 mouse_genomes_project 5 143706416 143709306 + MGP_LPJ_P0075184 Stag3 protein_coding nonsense_mediated_decay MGP_LPJ_T0015091.1 MGP_LPJ_G0013182.1 mouse_genomes_project 5 118717069 118717207 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001542.1 MGP_LPJ_G0001456.1 mouse_genomes_project 5 34278183 34278829 - TEC TEC MGP_LPJ_T0074652.1 MGP_LPJ_G0030067.1 mouse_genomes_project 5 139828529 139833670 - MGP_LPJ_P0074652 Wbscr28 protein_coding protein_coding MGP_LPJ_T0074653.1 MGP_LPJ_G0030067.1 mouse_genomes_project 5 139828530 139833670 - MGP_LPJ_P0074653 Wbscr28 protein_coding protein_coding MGP_LPJ_T0098608.1 MGP_LPJ_G0036882.1 mouse_genomes_project 5 397753 398505 + Gm43017 sense_intronic sense_intronic MGP_LPJ_T0014879.1 MGP_LPJ_G0012970.1 mouse_genomes_project 5 29814633 29815080 - processed_pseudogene processed_pseudogene MGP_LPJ_T0070453.1 MGP_LPJ_G0029286.1 mouse_genomes_project 5 28625298 28637455 - MGP_LPJ_P0070453 Adgrf3 protein_coding protein_coding MGP_LPJ_T0070454.1 MGP_LPJ_G0029286.1 mouse_genomes_project 5 28625302 28628248 - MGP_LPJ_P0070454 Adgrf3 protein_coding protein_coding MGP_LPJ_T0070455.1 MGP_LPJ_G0029286.1 mouse_genomes_project 5 28634138 28636320 - Adgrf3 protein_coding processed_transcript MGP_LPJ_T0100850.1 MGP_LPJ_G0039113.1 mouse_genomes_project 5 101691374 101691506 + Gm25969 snoRNA snoRNA MGP_LPJ_T0001735.1 MGP_LPJ_G0001647.1 mouse_genomes_project 5 83131289 83132706 - TEC TEC MGP_LPJ_T0008437.1 MGP_LPJ_G0006843.1 mouse_genomes_project 5 145540308 145547780 + Gm42423 lincRNA lincRNA MGP_LPJ_T0015027.1 MGP_LPJ_G0013118.1 mouse_genomes_project 5 94970588 94973049 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001693.1 MGP_LPJ_G0001606.1 mouse_genomes_project 5 68038334 68040089 - TEC TEC MGP_LPJ_T0074296.1 MGP_LPJ_G0030008.1 mouse_genomes_project 5 129176202 129202680 + MGP_LPJ_P0074296 Zfp664 protein_coding protein_coding MGP_LPJ_T0074297.1 MGP_LPJ_G0030008.1 mouse_genomes_project 5 129176275 129215568 + Zfp664 protein_coding processed_transcript MGP_LPJ_T0074298.1 MGP_LPJ_G0030008.1 mouse_genomes_project 5 129176550 129199357 + Zfp664 protein_coding processed_transcript MGP_LPJ_T0074299.1 MGP_LPJ_G0030008.1 mouse_genomes_project 5 129187660 129189805 + Zfp664 protein_coding processed_transcript MGP_LPJ_T0074300.1 MGP_LPJ_G0030008.1 mouse_genomes_project 5 129189477 129199527 + Zfp664 protein_coding processed_transcript MGP_LPJ_T0074301.1 MGP_LPJ_G0030008.1 mouse_genomes_project 5 129198618 129202680 + Zfp664 protein_coding processed_transcript MGP_LPJ_T0071789.1 MGP_LPJ_G0029502.1 mouse_genomes_project 5 69829457 69855225 - MGP_LPJ_P0071789 Yipf7 protein_coding protein_coding MGP_LPJ_T0071790.1 MGP_LPJ_G0029502.1 mouse_genomes_project 5 69832096 69855166 - MGP_LPJ_P0071790 Yipf7 protein_coding protein_coding MGP_LPJ_T0011613.1 MGP_LPJ_G0009731.1 mouse_genomes_project 5 102524422 102524491 + Gm27997 misc_RNA misc_RNA MGP_LPJ_T0004776.1 MGP_LPJ_G0004127.1 mouse_genomes_project 5 104005931 104014700 + Gm20548 antisense antisense MGP_LPJ_T0004777.1 MGP_LPJ_G0004127.1 mouse_genomes_project 5 104005957 104012796 + Gm20548 antisense antisense MGP_LPJ_T0004778.1 MGP_LPJ_G0004127.1 mouse_genomes_project 5 104005967 104012759 + Gm20548 antisense antisense MGP_LPJ_T0004779.1 MGP_LPJ_G0004127.1 mouse_genomes_project 5 104005973 104014911 + Gm20548 antisense antisense MGP_LPJ_T0004780.1 MGP_LPJ_G0004127.1 mouse_genomes_project 5 104008673 104012851 + Gm20548 antisense antisense MGP_LPJ_T0070557.1 MGP_LPJ_G0029304.1 mouse_genomes_project 5 29391740 29400113 + MGP_LPJ_P0070557 Tcf23 protein_coding protein_coding MGP_LPJ_T0075488.1 MGP_LPJ_G0030236.1 mouse_genomes_project 5 149437203 149465038 - MGP_LPJ_P0075488 Rac1 protein_coding protein_coding MGP_LPJ_T0075489.1 MGP_LPJ_G0030236.1 mouse_genomes_project 5 149439043 149464995 - MGP_LPJ_P0075489 Rac1 protein_coding protein_coding MGP_LPJ_T0075490.1 MGP_LPJ_G0030236.1 mouse_genomes_project 5 149443626 149455187 - Rac1 protein_coding processed_transcript MGP_LPJ_T0075491.1 MGP_LPJ_G0030236.1 mouse_genomes_project 5 149451683 149454613 - Rac1 protein_coding processed_transcript MGP_LPJ_T0014825.1 MGP_LPJ_G0012916.1 mouse_genomes_project 5 16684330 16684928 + processed_pseudogene processed_pseudogene MGP_LPJ_T0075720.1 MGP_LPJ_G0030292.1 mouse_genomes_project 5 153645968 153652434 - MGP_LPJ_P0075720 Cdx2 protein_coding protein_coding MGP_LPJ_T0071273.1 MGP_LPJ_G0029414.1 mouse_genomes_project 5 37550885 37568240 - MGP_LPJ_P0071273 Zfp518b protein_coding protein_coding MGP_LPJ_T0071274.1 MGP_LPJ_G0029414.1 mouse_genomes_project 5 37550887 37568164 - MGP_LPJ_P0071274 Zfp518b protein_coding protein_coding MGP_LPJ_T0071275.1 MGP_LPJ_G0029414.1 mouse_genomes_project 5 37556577 37568240 - MGP_LPJ_P0071275 Zfp518b protein_coding protein_coding MGP_LPJ_T0071276.1 MGP_LPJ_G0029414.1 mouse_genomes_project 5 37557028 37568171 - MGP_LPJ_P0071276 Zfp518b protein_coding protein_coding MGP_LPJ_T0004737.1 MGP_LPJ_G0004099.1 mouse_genomes_project 5 72043629 72064205 - Gm43477 antisense antisense MGP_LPJ_T0014809.1 MGP_LPJ_G0012900.1 mouse_genomes_project 5 7354325 7355790 + processed_pseudogene processed_pseudogene MGP_LPJ_T0075897.1 MGP_LPJ_G0030318.1 mouse_genomes_project 5 157278751 157418574 + MGP_LPJ_P0075897 Pds5b protein_coding protein_coding MGP_LPJ_T0075898.1 MGP_LPJ_G0030318.1 mouse_genomes_project 5 157278751 157419399 + MGP_LPJ_P0075898 Pds5b protein_coding protein_coding MGP_LPJ_T0075899.1 MGP_LPJ_G0030318.1 mouse_genomes_project 5 157278839 157419376 + MGP_LPJ_P0075899 Pds5b protein_coding protein_coding MGP_LPJ_T0075900.1 MGP_LPJ_G0030318.1 mouse_genomes_project 5 157357268 157358060 + Pds5b protein_coding retained_intron MGP_LPJ_T0075901.1 MGP_LPJ_G0030318.1 mouse_genomes_project 5 157366349 157407466 + MGP_LPJ_P0075901 Pds5b protein_coding protein_coding MGP_LPJ_T0075902.1 MGP_LPJ_G0030318.1 mouse_genomes_project 5 157369410 157379900 + Pds5b protein_coding processed_transcript MGP_LPJ_T0075903.1 MGP_LPJ_G0030318.1 mouse_genomes_project 5 157403621 157409755 + Pds5b protein_coding processed_transcript MGP_LPJ_T0075904.1 MGP_LPJ_G0030318.1 mouse_genomes_project 5 157413937 157419189 + Pds5b protein_coding retained_intron MGP_LPJ_T0014987.1 MGP_LPJ_G0013078.1 mouse_genomes_project 5 77025723 77025875 + processed_pseudogene processed_pseudogene MGP_LPJ_T0075533.1 MGP_LPJ_G0030244.1 mouse_genomes_project 5 149836143 149845181 + MGP_LPJ_P0075533 Gm42421 protein_coding protein_coding MGP_LPJ_T0011621.1 MGP_LPJ_G0009739.1 mouse_genomes_project 5 115353961 115354035 - Gm27882 misc_RNA misc_RNA MGP_LPJ_T0008467.1 MGP_LPJ_G0006869.1 mouse_genomes_project 5 155461845 155467013 - 5930430L01Rik lincRNA lincRNA MGP_LPJ_T0008468.1 MGP_LPJ_G0006869.1 mouse_genomes_project 5 155462871 155467005 - 5930430L01Rik lincRNA lincRNA MGP_LPJ_T0001909.1 MGP_LPJ_G0001819.1 mouse_genomes_project 5 140216871 140217675 + TEC TEC MGP_LPJ_T0072597.1 MGP_LPJ_G0029685.1 mouse_genomes_project 5 102141887 102226101 - MGP_LPJ_P0072597 Tmem150c protein_coding protein_coding MGP_LPJ_T0072598.1 MGP_LPJ_G0029685.1 mouse_genomes_project 5 102149127 102225718 - Tmem150c protein_coding retained_intron MGP_LPJ_T0072599.1 MGP_LPJ_G0029685.1 mouse_genomes_project 5 102149128 102189264 - Tmem150c protein_coding retained_intron MGP_LPJ_T0072600.1 MGP_LPJ_G0029685.1 mouse_genomes_project 5 102151187 102225863 - Tmem150c protein_coding retained_intron MGP_LPJ_T0072601.1 MGP_LPJ_G0029685.1 mouse_genomes_project 5 102151308 102225567 - MGP_LPJ_P0072601 Tmem150c protein_coding protein_coding MGP_LPJ_T0070786.1 MGP_LPJ_G0029336.1 mouse_genomes_project 5 31144916 31223978 + MGP_LPJ_P0070786 Yes1 protein_coding protein_coding MGP_LPJ_T0070787.1 MGP_LPJ_G0029336.1 mouse_genomes_project 5 31145115 31226276 + MGP_LPJ_P0070787 Yes1 protein_coding protein_coding MGP_LPJ_T0070788.1 MGP_LPJ_G0029336.1 mouse_genomes_project 5 31145129 31147871 + Yes1 protein_coding retained_intron MGP_LPJ_T0070789.1 MGP_LPJ_G0029336.1 mouse_genomes_project 5 31174854 31195974 + MGP_LPJ_P0070789 Yes1 protein_coding protein_coding MGP_LPJ_T0011605.1 MGP_LPJ_G0009723.1 mouse_genomes_project 5 28093337 28093666 + Gm26346 misc_RNA misc_RNA MGP_LPJ_T0070106.1 MGP_LPJ_G0029215.1 mouse_genomes_project 5 19330627 19336359 + MGP_LPJ_P0070106 Fgl2 protein_coding protein_coding MGP_LPJ_T0004864.1 MGP_LPJ_G0004186.1 mouse_genomes_project 5 129414846 129418365 + Gm42839 antisense antisense MGP_LPJ_T0001617.1 MGP_LPJ_G0001531.1 mouse_genomes_project 5 51268150 51273022 - TEC TEC MGP_LPJ_T0004833.1 MGP_LPJ_G0004163.1 mouse_genomes_project 5 123909920 123928080 - Gm10390 antisense antisense MGP_LPJ_T0004834.1 MGP_LPJ_G0004163.1 mouse_genomes_project 5 123920303 123928082 - Gm10390 antisense antisense MGP_LPJ_T0008197.1 MGP_LPJ_G0006681.1 mouse_genomes_project 5 77775460 77781698 - Gm15831 lincRNA lincRNA MGP_LPJ_T0001672.1 MGP_LPJ_G0001585.1 mouse_genomes_project 5 66097119 66103507 + TEC TEC MGP_LPJ_T0015147.1 MGP_LPJ_G0013238.1 mouse_genomes_project 5 151450781 151451367 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008109.1 MGP_LPJ_G0006614.1 mouse_genomes_project 5 35229357 35247482 - 2210406O10Rik lincRNA lincRNA MGP_LPJ_T0008110.1 MGP_LPJ_G0006614.1 mouse_genomes_project 5 35237589 35247473 - 2210406O10Rik lincRNA lincRNA MGP_LPJ_T0008111.1 MGP_LPJ_G0006614.1 mouse_genomes_project 5 35238370 35247472 - 2210406O10Rik lincRNA lincRNA MGP_LPJ_T0008112.1 MGP_LPJ_G0006614.1 mouse_genomes_project 5 35241023 35247514 - 2210406O10Rik lincRNA lincRNA MGP_LPJ_T0014969.1 MGP_LPJ_G0013060.1 mouse_genomes_project 5 68262046 68262610 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100822.1 MGP_LPJ_G0039085.1 mouse_genomes_project 5 20360380 20360494 - Gm25459 snoRNA snoRNA MGP_LPJ_T0001647.1 MGP_LPJ_G0001561.1 mouse_genomes_project 5 59847792 59854348 - TEC TEC MGP_LPJ_T0001479.1 MGP_LPJ_G0001396.1 mouse_genomes_project 5 10644631 10647128 - TEC TEC MGP_LPJ_T0071727.1 MGP_LPJ_G0029491.1 mouse_genomes_project 5 66990996 67237059 + Limch1 protein_coding retained_intron MGP_LPJ_T0071728.1 MGP_LPJ_G0029491.1 mouse_genomes_project 5 66991036 66993561 + Limch1 protein_coding retained_intron MGP_LPJ_T0071729.1 MGP_LPJ_G0029491.1 mouse_genomes_project 5 66991052 67320811 + MGP_LPJ_P0071729 Limch1 protein_coding protein_coding MGP_LPJ_T0071730.1 MGP_LPJ_G0029491.1 mouse_genomes_project 5 66991058 67215077 + MGP_LPJ_P0071730 Limch1 protein_coding nonsense_mediated_decay MGP_LPJ_T0071731.1 MGP_LPJ_G0029491.1 mouse_genomes_project 5 66991079 67321900 + MGP_LPJ_P0071731 Limch1 protein_coding protein_coding MGP_LPJ_T0071732.1 MGP_LPJ_G0029491.1 mouse_genomes_project 5 67155881 67231550 + MGP_LPJ_P0071732 Limch1 protein_coding protein_coding MGP_LPJ_T0071733.1 MGP_LPJ_G0029491.1 mouse_genomes_project 5 67230401 67319428 + Limch1 protein_coding processed_transcript MGP_LPJ_T0071734.1 MGP_LPJ_G0029491.1 mouse_genomes_project 5 67230812 67321891 + MGP_LPJ_P0071734 Limch1 protein_coding protein_coding MGP_LPJ_T0071735.1 MGP_LPJ_G0029491.1 mouse_genomes_project 5 67230961 67296952 + Limch1 protein_coding retained_intron MGP_LPJ_T0071736.1 MGP_LPJ_G0029491.1 mouse_genomes_project 5 67230973 67262485 + MGP_LPJ_P0071736 Limch1 protein_coding protein_coding MGP_LPJ_T0071737.1 MGP_LPJ_G0029491.1 mouse_genomes_project 5 67231046 67237312 + Limch1 protein_coding retained_intron MGP_LPJ_T0071738.1 MGP_LPJ_G0029491.1 mouse_genomes_project 5 67231357 67262515 + MGP_LPJ_P0071738 Limch1 protein_coding protein_coding MGP_LPJ_T0071739.1 MGP_LPJ_G0029491.1 mouse_genomes_project 5 67239414 67262961 + Limch1 protein_coding processed_transcript MGP_LPJ_T0071740.1 MGP_LPJ_G0029491.1 mouse_genomes_project 5 67260819 67263066 + Limch1 protein_coding retained_intron MGP_LPJ_T0071741.1 MGP_LPJ_G0029491.1 mouse_genomes_project 5 67309085 67319380 + Limch1 protein_coding processed_transcript MGP_LPJ_T0071742.1 MGP_LPJ_G0029491.1 mouse_genomes_project 5 67309140 67319375 + MGP_LPJ_P0071742 Limch1 protein_coding nonsense_mediated_decay MGP_LPJ_T0014838.1 MGP_LPJ_G0012929.1 mouse_genomes_project 5 19885083 19885368 + processed_pseudogene processed_pseudogene MGP_LPJ_T0071767.1 MGP_LPJ_G0029496.1 mouse_genomes_project 5 67882800 67888978 + MGP_LPJ_P0071767 Shisa3 protein_coding protein_coding MGP_LPJ_T0071768.1 MGP_LPJ_G0029496.1 mouse_genomes_project 5 67882887 67900592 + MGP_LPJ_P0071768 Shisa3 protein_coding nonsense_mediated_decay MGP_LPJ_T0073793.1 MGP_LPJ_G0029933.1 mouse_genomes_project 5 125524848 125558147 - MGP_LPJ_P0073793 Gm42878 protein_coding protein_coding MGP_LPJ_T0073794.1 MGP_LPJ_G0029933.1 mouse_genomes_project 5 125524848 125558147 - MGP_LPJ_P0073794 Gm42878 protein_coding nonsense_mediated_decay MGP_LPJ_T0015112.1 MGP_LPJ_G0013203.1 mouse_genomes_project 5 139348941 139349151 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008133.1 MGP_LPJ_G0006628.1 mouse_genomes_project 5 42448264 42451412 + Gm43699 lincRNA lincRNA MGP_LPJ_T0102204.1 MGP_LPJ_G0040241.1 mouse_genomes_project 5 155392812 155393035 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0015104.1 MGP_LPJ_G0013195.1 mouse_genomes_project 5 127742216 127742594 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098265.1 MGP_LPJ_G0036546.1 mouse_genomes_project 5 20419335 20419448 - n-R5s170 rRNA rRNA MGP_LPJ_T0001538.1 MGP_LPJ_G0001452.1 mouse_genomes_project 5 33236568 33237037 + TEC TEC MGP_LPJ_T0014895.1 MGP_LPJ_G0012986.1 mouse_genomes_project 5 32722451 32722782 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001797.1 MGP_LPJ_G0001709.1 mouse_genomes_project 5 117114311 117117615 + TEC TEC MGP_LPJ_T0075624.1 MGP_LPJ_G0030265.1 mouse_genomes_project 5 151157027 151178773 - MGP_LPJ_P0075624 Ptcd1 protein_coding protein_coding MGP_LPJ_T0075625.1 MGP_LPJ_G0030265.1 mouse_genomes_project 5 151177116 151178621 - MGP_LPJ_P0075625 Ptcd1 protein_coding protein_coding MGP_LPJ_T0001851.1 MGP_LPJ_G0001763.1 mouse_genomes_project 5 128646724 128648039 - TEC TEC MGP_LPJ_T0011609.1 MGP_LPJ_G0009727.1 mouse_genomes_project 5 80516168 80516463 - Gm22553 misc_RNA misc_RNA MGP_LPJ_T0072614.1 MGP_LPJ_G0029687.1 mouse_genomes_project 5 102539599 102601032 - MGP_LPJ_P0072614 Lin54 protein_coding protein_coding MGP_LPJ_T0072615.1 MGP_LPJ_G0029687.1 mouse_genomes_project 5 102539609 102598877 - MGP_LPJ_P0072615 Lin54 protein_coding protein_coding MGP_LPJ_T0072616.1 MGP_LPJ_G0029687.1 mouse_genomes_project 5 102539714 102601068 - MGP_LPJ_P0072616 Lin54 protein_coding protein_coding MGP_LPJ_T0072617.1 MGP_LPJ_G0029687.1 mouse_genomes_project 5 102539714 102598919 - MGP_LPJ_P0072617 Lin54 protein_coding protein_coding MGP_LPJ_T0072618.1 MGP_LPJ_G0029687.1 mouse_genomes_project 5 102539723 102598864 - MGP_LPJ_P0072618 Lin54 protein_coding protein_coding MGP_LPJ_T0072619.1 MGP_LPJ_G0029687.1 mouse_genomes_project 5 102539881 102601081 - MGP_LPJ_P0072619 Lin54 protein_coding nonsense_mediated_decay MGP_LPJ_T0072620.1 MGP_LPJ_G0029687.1 mouse_genomes_project 5 102541233 102598809 - MGP_LPJ_P0072620 Lin54 protein_coding nonsense_mediated_decay MGP_LPJ_T0072621.1 MGP_LPJ_G0029687.1 mouse_genomes_project 5 102541233 102598809 - MGP_LPJ_P0072621 Lin54 protein_coding protein_coding MGP_LPJ_T0072622.1 MGP_LPJ_G0029687.1 mouse_genomes_project 5 102557216 102585197 - MGP_LPJ_P0072622 Lin54 protein_coding nonsense_mediated_decay MGP_LPJ_T0072623.1 MGP_LPJ_G0029687.1 mouse_genomes_project 5 102584114 102598864 - Lin54 protein_coding retained_intron MGP_LPJ_T0071279.1 MGP_LPJ_G0029416.1 mouse_genomes_project 5 38529402 38678604 - MGP_LPJ_P0071279 Hs3st1 protein_coding protein_coding MGP_LPJ_T0071280.1 MGP_LPJ_G0029416.1 mouse_genomes_project 5 38529406 38563527 - MGP_LPJ_P0071280 Hs3st1 protein_coding protein_coding MGP_LPJ_T0071281.1 MGP_LPJ_G0029416.1 mouse_genomes_project 5 38530236 38564139 - MGP_LPJ_P0071281 Hs3st1 protein_coding protein_coding MGP_LPJ_T0071282.1 MGP_LPJ_G0029416.1 mouse_genomes_project 5 38530541 38563490 - MGP_LPJ_P0071282 Hs3st1 protein_coding protein_coding MGP_LPJ_T0070044.1 MGP_LPJ_G0029204.1 mouse_genomes_project 5 15393184 15545425 + MGP_LPJ_P0070044 Sema3c protein_coding protein_coding MGP_LPJ_T0070045.1 MGP_LPJ_G0029204.1 mouse_genomes_project 5 15393552 15498966 + MGP_LPJ_P0070045 Sema3c protein_coding nonsense_mediated_decay MGP_LPJ_T0070046.1 MGP_LPJ_G0029204.1 mouse_genomes_project 5 15393669 15397072 + Sema3c protein_coding retained_intron MGP_LPJ_T0070047.1 MGP_LPJ_G0029204.1 mouse_genomes_project 5 15393802 15491002 + MGP_LPJ_P0070047 Sema3c protein_coding protein_coding MGP_LPJ_T0070048.1 MGP_LPJ_G0029204.1 mouse_genomes_project 5 15507774 15545422 + Sema3c protein_coding retained_intron MGP_LPJ_T0004922.1 MGP_LPJ_G0004229.1 mouse_genomes_project 5 157162550 157169795 - Gm42529 antisense antisense MGP_LPJ_T0015068.1 MGP_LPJ_G0013159.1 mouse_genomes_project 5 111641968 111642206 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008126.1 MGP_LPJ_G0006623.1 mouse_genomes_project 5 38373546 38519009 - 4930513D17Rik lincRNA lincRNA MGP_LPJ_T0008127.1 MGP_LPJ_G0006623.1 mouse_genomes_project 5 38374361 38519052 - 4930513D17Rik lincRNA lincRNA MGP_LPJ_T0008128.1 MGP_LPJ_G0006623.1 mouse_genomes_project 5 38393470 38519007 - 4930513D17Rik lincRNA lincRNA MGP_LPJ_T0073500.1 MGP_LPJ_G0029873.1 mouse_genomes_project 5 118957473 119010324 + MGP_LPJ_P0073500 Pxn protein_coding protein_coding MGP_LPJ_T0073501.1 MGP_LPJ_G0029873.1 mouse_genomes_project 5 118957508 119010319 + Pxn protein_coding retained_intron MGP_LPJ_T0073502.1 MGP_LPJ_G0029873.1 mouse_genomes_project 5 118957605 119009314 + MGP_LPJ_P0073502 Pxn protein_coding protein_coding MGP_LPJ_T0073503.1 MGP_LPJ_G0029873.1 mouse_genomes_project 5 118957653 119003484 + MGP_LPJ_P0073503 Pxn protein_coding unknown_likely_coding MGP_LPJ_T0073504.1 MGP_LPJ_G0029873.1 mouse_genomes_project 5 118967156 118999224 + Pxn protein_coding processed_transcript MGP_LPJ_T0073505.1 MGP_LPJ_G0029873.1 mouse_genomes_project 5 118971679 119010319 + Pxn protein_coding processed_transcript MGP_LPJ_T0073506.1 MGP_LPJ_G0029873.1 mouse_genomes_project 5 118997269 119001225 + MGP_LPJ_P0073506 Pxn protein_coding protein_coding MGP_LPJ_T0073507.1 MGP_LPJ_G0029873.1 mouse_genomes_project 5 118997305 119001180 + MGP_LPJ_P0073507 Pxn protein_coding protein_coding MGP_LPJ_T0073508.1 MGP_LPJ_G0029873.1 mouse_genomes_project 5 118998287 118999753 + Pxn protein_coding processed_transcript MGP_LPJ_T0073509.1 MGP_LPJ_G0029873.1 mouse_genomes_project 5 118998425 119008837 + MGP_LPJ_P0073509 Pxn protein_coding protein_coding MGP_LPJ_T0073510.1 MGP_LPJ_G0029873.1 mouse_genomes_project 5 118998454 118999289 + Pxn protein_coding retained_intron MGP_LPJ_T0073511.1 MGP_LPJ_G0029873.1 mouse_genomes_project 5 118999136 119004101 + Pxn protein_coding retained_intron MGP_LPJ_T0073512.1 MGP_LPJ_G0029873.1 mouse_genomes_project 5 118999644 119000116 + Pxn protein_coding retained_intron MGP_LPJ_T0073513.1 MGP_LPJ_G0029873.1 mouse_genomes_project 5 119004046 119010324 + MGP_LPJ_P0073513 Pxn protein_coding unknown_likely_coding MGP_LPJ_T0073514.1 MGP_LPJ_G0029873.1 mouse_genomes_project 5 119006265 119007119 + Pxn protein_coding retained_intron MGP_LPJ_T0001534.1 MGP_LPJ_G0001448.1 mouse_genomes_project 5 32264712 32265867 + TEC TEC MGP_LPJ_T0001724.1 MGP_LPJ_G0001636.1 mouse_genomes_project 5 74949830 74952411 - TEC TEC MGP_LPJ_T0075641.1 MGP_LPJ_G0030269.1 mouse_genomes_project 5 151216581 151235771 + MGP_LPJ_P0075641 Zkscan5 protein_coding protein_coding MGP_LPJ_T0075642.1 MGP_LPJ_G0030269.1 mouse_genomes_project 5 151216687 151235771 + MGP_LPJ_P0075642 Zkscan5 protein_coding protein_coding MGP_LPJ_T0075643.1 MGP_LPJ_G0030269.1 mouse_genomes_project 5 151217140 151232605 + MGP_LPJ_P0075643 Zkscan5 protein_coding nonsense_mediated_decay MGP_LPJ_T0075644.1 MGP_LPJ_G0030269.1 mouse_genomes_project 5 151219631 151232469 + MGP_LPJ_P0075644 Zkscan5 protein_coding nonsense_mediated_decay MGP_LPJ_T0075645.1 MGP_LPJ_G0030269.1 mouse_genomes_project 5 151219661 151232523 + MGP_LPJ_P0075645 Zkscan5 protein_coding protein_coding MGP_LPJ_T0075646.1 MGP_LPJ_G0030269.1 mouse_genomes_project 5 151220545 151232339 + Zkscan5 protein_coding processed_transcript MGP_LPJ_T0071163.1 MGP_LPJ_G0029398.1 mouse_genomes_project 5 35826298 35893013 + MGP_LPJ_P0071163 Jakmip1 protein_coding protein_coding MGP_LPJ_T0071164.1 MGP_LPJ_G0029398.1 mouse_genomes_project 5 35827092 35886740 + Jakmip1 protein_coding processed_transcript MGP_LPJ_T0071165.1 MGP_LPJ_G0029398.1 mouse_genomes_project 5 35827847 35893109 + MGP_LPJ_P0071165 Jakmip1 protein_coding protein_coding MGP_LPJ_T0071166.1 MGP_LPJ_G0029398.1 mouse_genomes_project 5 35827867 35892808 + MGP_LPJ_P0071166 Jakmip1 protein_coding protein_coding MGP_LPJ_T0071167.1 MGP_LPJ_G0029398.1 mouse_genomes_project 5 35845132 35886760 + Jakmip1 protein_coding processed_transcript MGP_LPJ_T0071168.1 MGP_LPJ_G0029398.1 mouse_genomes_project 5 35845546 35888385 + Jakmip1 protein_coding retained_intron MGP_LPJ_T0071169.1 MGP_LPJ_G0029398.1 mouse_genomes_project 5 35845587 35907531 + MGP_LPJ_P0071169 Jakmip1 protein_coding protein_coding MGP_LPJ_T0071170.1 MGP_LPJ_G0029398.1 mouse_genomes_project 5 35849009 35927983 + MGP_LPJ_P0071170 Jakmip1 protein_coding protein_coding MGP_LPJ_T0071171.1 MGP_LPJ_G0029398.1 mouse_genomes_project 5 35849068 35888735 + Jakmip1 protein_coding retained_intron MGP_LPJ_T0071172.1 MGP_LPJ_G0029398.1 mouse_genomes_project 5 35886799 35949905 + MGP_LPJ_P0071172 Jakmip1 protein_coding protein_coding MGP_LPJ_T0071173.1 MGP_LPJ_G0029398.1 mouse_genomes_project 5 35886799 35949905 + MGP_LPJ_P0071173 Jakmip1 protein_coding protein_coding MGP_LPJ_T0071174.1 MGP_LPJ_G0029398.1 mouse_genomes_project 5 35892645 35893595 + Jakmip1 protein_coding retained_intron MGP_LPJ_T0071175.1 MGP_LPJ_G0029398.1 mouse_genomes_project 5 35925653 35927702 + Jakmip1 protein_coding retained_intron MGP_LPJ_T0071176.1 MGP_LPJ_G0029398.1 mouse_genomes_project 5 35928909 35952912 + MGP_LPJ_P0071176 Jakmip1 protein_coding unknown_likely_coding MGP_LPJ_T0073047.1 MGP_LPJ_G0029784.1 mouse_genomes_project 5 113264143 113274988 - MGP_LPJ_P0073047 Pgam5 protein_coding protein_coding MGP_LPJ_T0073048.1 MGP_LPJ_G0029784.1 mouse_genomes_project 5 113264169 113274962 - MGP_LPJ_P0073048 Pgam5 protein_coding protein_coding MGP_LPJ_T0073049.1 MGP_LPJ_G0029784.1 mouse_genomes_project 5 113270326 113271126 - Pgam5 protein_coding retained_intron MGP_LPJ_T0073050.1 MGP_LPJ_G0029784.1 mouse_genomes_project 5 113270672 113274929 - MGP_LPJ_P0073050 Pgam5 protein_coding protein_coding MGP_LPJ_T0075121.1 MGP_LPJ_G0030160.1 mouse_genomes_project 5 143495123 143508191 - MGP_LPJ_P0075121 protein_coding protein_coding MGP_LPJ_T0075122.1 MGP_LPJ_G0030160.1 mouse_genomes_project 5 143495140 143496154 - protein_coding retained_intron MGP_LPJ_T0075123.1 MGP_LPJ_G0030160.1 mouse_genomes_project 5 143495140 143507587 - MGP_LPJ_P0075123 protein_coding protein_coding MGP_LPJ_T0075124.1 MGP_LPJ_G0030160.1 mouse_genomes_project 5 143498877 143506150 - protein_coding retained_intron MGP_LPJ_T0075125.1 MGP_LPJ_G0030160.1 mouse_genomes_project 5 143499273 143507035 - MGP_LPJ_P0075125 protein_coding protein_coding MGP_LPJ_T0075126.1 MGP_LPJ_G0030160.1 mouse_genomes_project 5 143499526 143500461 - protein_coding retained_intron MGP_LPJ_T0075127.1 MGP_LPJ_G0030160.1 mouse_genomes_project 5 143499695 143506786 - MGP_LPJ_P0075127 protein_coding protein_coding MGP_LPJ_T0075128.1 MGP_LPJ_G0030160.1 mouse_genomes_project 5 143499696 143507584 - MGP_LPJ_P0075128 protein_coding protein_coding MGP_LPJ_T0075129.1 MGP_LPJ_G0030160.1 mouse_genomes_project 5 143500026 143506430 - MGP_LPJ_P0075129 protein_coding protein_coding MGP_LPJ_T0075130.1 MGP_LPJ_G0030160.1 mouse_genomes_project 5 143500228 143507010 - MGP_LPJ_P0075130 protein_coding protein_coding MGP_LPJ_T0070934.1 MGP_LPJ_G0029361.1 mouse_genomes_project 5 32826955 32929046 - MGP_LPJ_P0070934 Zfyve28 protein_coding protein_coding MGP_LPJ_T0070935.1 MGP_LPJ_G0029361.1 mouse_genomes_project 5 32849907 32864710 - Zfyve28 protein_coding retained_intron MGP_LPJ_T0070936.1 MGP_LPJ_G0029361.1 mouse_genomes_project 5 32849992 32865172 - Zfyve28 protein_coding processed_transcript MGP_LPJ_T0070937.1 MGP_LPJ_G0029361.1 mouse_genomes_project 5 32854122 32875713 - Zfyve28 protein_coding retained_intron MGP_LPJ_T0070938.1 MGP_LPJ_G0029361.1 mouse_genomes_project 5 32858741 32929169 - Zfyve28 protein_coding processed_transcript MGP_LPJ_T0070939.1 MGP_LPJ_G0029361.1 mouse_genomes_project 5 32866565 32929157 - MGP_LPJ_P0070939 Zfyve28 protein_coding protein_coding MGP_LPJ_T0069834.1 MGP_LPJ_G0029172.1 mouse_genomes_project 5 979495 1001505 - MGP_LPJ_P0069834 Cyp51 protein_coding protein_coding MGP_LPJ_T0069835.1 MGP_LPJ_G0029172.1 mouse_genomes_project 5 981629 1001102 - Cyp51 protein_coding processed_transcript MGP_LPJ_T0069836.1 MGP_LPJ_G0029172.1 mouse_genomes_project 5 996034 1000140 - Cyp51 protein_coding retained_intron MGP_LPJ_T0069837.1 MGP_LPJ_G0029172.1 mouse_genomes_project 5 997807 1001180 - Cyp51 protein_coding retained_intron MGP_LPJ_T0072194.1 MGP_LPJ_G0029577.1 mouse_genomes_project 5 88197822 88207942 - MGP_LPJ_P0072194 Ugt2b1 protein_coding protein_coding MGP_LPJ_T0015017.1 MGP_LPJ_G0013108.1 mouse_genomes_project 5 90250237 90251627 - processed_pseudogene processed_pseudogene MGP_LPJ_T0070596.1 MGP_LPJ_G0029310.1 mouse_genomes_project 5 29551580 29576280 + MGP_LPJ_P0070596 Trim54 protein_coding protein_coding MGP_LPJ_T0070597.1 MGP_LPJ_G0029310.1 mouse_genomes_project 5 29551602 29576282 + MGP_LPJ_P0070597 Trim54 protein_coding protein_coding MGP_LPJ_T0099557.1 MGP_LPJ_G0037820.1 mouse_genomes_project 5 20617338 20617403 - Gm24512 snRNA snRNA MGP_LPJ_T0074789.1 MGP_LPJ_G0030096.1 mouse_genomes_project 5 140912222 140913976 + MGP_LPJ_P0074789 Hspb1 protein_coding protein_coding MGP_LPJ_T0074790.1 MGP_LPJ_G0030096.1 mouse_genomes_project 5 140912321 140913974 + MGP_LPJ_P0074790 Hspb1 protein_coding protein_coding MGP_LPJ_T0008404.1 MGP_LPJ_G0006820.1 mouse_genomes_project 5 131655354 131655760 - Gm43476 lincRNA lincRNA MGP_LPJ_T0014874.1 MGP_LPJ_G0012965.1 mouse_genomes_project 5 28071318 28071610 + processed_pseudogene processed_pseudogene MGP_LPJ_T0072551.1 MGP_LPJ_G0029673.1 mouse_genomes_project 5 100137706 100145848 + MGP_LPJ_P0072551 Prdm8 protein_coding protein_coding MGP_LPJ_T0072749.1 MGP_LPJ_G0029716.1 mouse_genomes_project 5 106736110 106786456 + MGP_LPJ_P0072749 Pkd2 protein_coding protein_coding MGP_LPJ_T0072750.1 MGP_LPJ_G0029716.1 mouse_genomes_project 5 106736230 106769770 + Pkd2 protein_coding processed_transcript MGP_LPJ_T0072751.1 MGP_LPJ_G0029716.1 mouse_genomes_project 5 106772220 106780795 + Pkd2 protein_coding retained_intron MGP_LPJ_T0072101.1 MGP_LPJ_G0029560.1 mouse_genomes_project 5 78025803 78086847 - MGP_LPJ_P0072101 Igfbp7 protein_coding unknown_likely_coding MGP_LPJ_T0072102.1 MGP_LPJ_G0029560.1 mouse_genomes_project 5 78025805 78097142 - MGP_LPJ_P0072102 Igfbp7 protein_coding protein_coding MGP_LPJ_T0072103.1 MGP_LPJ_G0029560.1 mouse_genomes_project 5 78025813 78097141 - MGP_LPJ_P0072103 Igfbp7 protein_coding protein_coding MGP_LPJ_T0001690.1 MGP_LPJ_G0001603.1 mouse_genomes_project 5 67696698 67699109 + TEC TEC MGP_LPJ_T0008161.1 MGP_LPJ_G0006654.1 mouse_genomes_project 5 64482798 64525446 + Gm31363 lincRNA lincRNA MGP_LPJ_T0010754.1 MGP_LPJ_G0008872.1 mouse_genomes_project 5 144956172 144956268 - Mir339 miRNA miRNA MGP_LPJ_T0008305.1 MGP_LPJ_G0006757.1 mouse_genomes_project 5 115060471 115064908 - Gm42488 lincRNA lincRNA MGP_LPJ_T0001756.1 MGP_LPJ_G0001668.1 mouse_genomes_project 5 102527412 102529245 + TEC TEC MGP_LPJ_T0072432.1 MGP_LPJ_G0029650.1 mouse_genomes_project 5 93880797 93949994 + MGP_LPJ_P0072432 Art3 protein_coding protein_coding MGP_LPJ_T0072433.1 MGP_LPJ_G0029650.1 mouse_genomes_project 5 93880800 93950191 + MGP_LPJ_P0072433 Art3 protein_coding protein_coding MGP_LPJ_T0072434.1 MGP_LPJ_G0029650.1 mouse_genomes_project 5 93880811 93895721 + Art3 protein_coding processed_transcript MGP_LPJ_T0072435.1 MGP_LPJ_G0029650.1 mouse_genomes_project 5 93880811 93972181 + MGP_LPJ_P0072435 Art3 protein_coding protein_coding MGP_LPJ_T0072436.1 MGP_LPJ_G0029650.1 mouse_genomes_project 5 93880811 93972178 + MGP_LPJ_P0072436 Art3 protein_coding protein_coding MGP_LPJ_T0072442.1 MGP_LPJ_G0029650.1 mouse_genomes_project 5 93931107 93950106 + MGP_LPJ_P0072442 Art3 protein_coding protein_coding MGP_LPJ_T0072443.1 MGP_LPJ_G0029650.1 mouse_genomes_project 5 93943945 93950077 + MGP_LPJ_P0072443 Art3 protein_coding protein_coding MGP_LPJ_T0072444.1 MGP_LPJ_G0029650.1 mouse_genomes_project 5 93944821 93949785 + MGP_LPJ_P0072444 Art3 protein_coding protein_coding MGP_LPJ_T0072445.1 MGP_LPJ_G0029650.1 mouse_genomes_project 5 93944904 93949655 + MGP_LPJ_P0072445 Art3 protein_coding protein_coding MGP_LPJ_T0072446.1 MGP_LPJ_G0029650.1 mouse_genomes_project 5 93944909 93950036 + MGP_LPJ_P0072446 Art3 protein_coding protein_coding MGP_LPJ_T0072447.1 MGP_LPJ_G0029650.1 mouse_genomes_project 5 93945201 93972175 + Art3 protein_coding processed_transcript MGP_LPJ_T0072448.1 MGP_LPJ_G0029650.1 mouse_genomes_project 5 93945201 93972175 + MGP_LPJ_P0072448 Art3 protein_coding protein_coding MGP_LPJ_T0072449.1 MGP_LPJ_G0029650.1 mouse_genomes_project 5 93945201 93972175 + MGP_LPJ_P0072449 Art3 protein_coding protein_coding MGP_LPJ_T0072450.1 MGP_LPJ_G0029650.1 mouse_genomes_project 5 93945201 93972175 + MGP_LPJ_P0072450 Art3 protein_coding protein_coding MGP_LPJ_T0072451.1 MGP_LPJ_G0029650.1 mouse_genomes_project 5 93945201 93972176 + MGP_LPJ_P0072451 Art3 protein_coding protein_coding MGP_LPJ_T0072452.1 MGP_LPJ_G0029650.1 mouse_genomes_project 5 93945201 93972175 + MGP_LPJ_P0072452 Art3 protein_coding protein_coding MGP_LPJ_T0072453.1 MGP_LPJ_G0029650.1 mouse_genomes_project 5 93949644 93972175 + MGP_LPJ_P0072453 Art3 protein_coding protein_coding MGP_LPJ_T0072454.1 MGP_LPJ_G0029650.1 mouse_genomes_project 5 93950118 93972176 + MGP_LPJ_P0072454 Art3 protein_coding protein_coding MGP_LPJ_T0072455.1 MGP_LPJ_G0029650.1 mouse_genomes_project 5 93958707 93972000 + MGP_LPJ_P0072455 Art3 protein_coding protein_coding MGP_LPJ_T0001923.1 MGP_LPJ_G0001833.1 mouse_genomes_project 5 149242426 149243452 + TEC TEC MGP_LPJ_T0014792.1 MGP_LPJ_G0012883.1 mouse_genomes_project 5 879388 881100 + processed_pseudogene processed_pseudogene MGP_LPJ_T0018084.1 MGP_LPJ_G0015511.1 mouse_genomes_project 5 35381018 35415731 - Gm42936 processed_transcript processed_transcript MGP_LPJ_T0098273.1 MGP_LPJ_G0036554.1 mouse_genomes_project 5 92365469 92365586 + Gm22816 rRNA rRNA MGP_LPJ_T0072546.1 MGP_LPJ_G0029670.1 mouse_genomes_project 5 99321151 99331286 - MGP_LPJ_P0072546 Naa11 protein_coding protein_coding MGP_LPJ_T0014850.1 MGP_LPJ_G0012941.1 mouse_genomes_project 5 21416515 21417140 - processed_pseudogene processed_pseudogene MGP_LPJ_T0074380.1 MGP_LPJ_G0030025.1 mouse_genomes_project 5 133551130 133575135 - MGP_LPJ_P0074380 Stx2 protein_coding protein_coding MGP_LPJ_T0074381.1 MGP_LPJ_G0030025.1 mouse_genomes_project 5 133551136 133575096 - MGP_LPJ_P0074381 Stx2 protein_coding protein_coding MGP_LPJ_T0074382.1 MGP_LPJ_G0030025.1 mouse_genomes_project 5 133552728 133555732 - Stx2 protein_coding retained_intron MGP_LPJ_T0074383.1 MGP_LPJ_G0030025.1 mouse_genomes_project 5 133555238 133556423 - Stx2 protein_coding retained_intron MGP_LPJ_T0074384.1 MGP_LPJ_G0030025.1 mouse_genomes_project 5 133555481 133574984 - Stx2 protein_coding processed_transcript MGP_LPJ_T0074385.1 MGP_LPJ_G0030025.1 mouse_genomes_project 5 133557214 133575110 - Stx2 protein_coding retained_intron MGP_LPJ_T0074386.1 MGP_LPJ_G0030025.1 mouse_genomes_project 5 133560067 133575005 - MGP_LPJ_P0074386 Stx2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074387.1 MGP_LPJ_G0030025.1 mouse_genomes_project 5 133560081 133566198 - MGP_LPJ_P0074387 Stx2 protein_coding protein_coding MGP_LPJ_T0074388.1 MGP_LPJ_G0030025.1 mouse_genomes_project 5 133565650 133575107 - Stx2 protein_coding retained_intron MGP_LPJ_T0008113.1 MGP_LPJ_G0006615.1 mouse_genomes_project 5 35987329 36000918 + lincRNA lincRNA MGP_LPJ_T0008114.1 MGP_LPJ_G0006615.1 mouse_genomes_project 5 35990921 35999613 + lincRNA lincRNA MGP_LPJ_T0071857.1 MGP_LPJ_G0029516.1 mouse_genomes_project 5 73093285 73152347 - MGP_LPJ_P0071857 Txk protein_coding protein_coding MGP_LPJ_T0071858.1 MGP_LPJ_G0029516.1 mouse_genomes_project 5 73093285 73136262 - MGP_LPJ_P0071858 Txk protein_coding protein_coding MGP_LPJ_T0071859.1 MGP_LPJ_G0029516.1 mouse_genomes_project 5 73093285 73152351 - MGP_LPJ_P0071859 Txk protein_coding protein_coding MGP_LPJ_T0071860.1 MGP_LPJ_G0029516.1 mouse_genomes_project 5 73093287 73152347 - MGP_LPJ_P0071860 Txk protein_coding protein_coding MGP_LPJ_T0071861.1 MGP_LPJ_G0029516.1 mouse_genomes_project 5 73093293 73135566 - Txk protein_coding processed_transcript MGP_LPJ_T0071862.1 MGP_LPJ_G0029516.1 mouse_genomes_project 5 73093293 73135566 - Txk protein_coding processed_transcript MGP_LPJ_T0071863.1 MGP_LPJ_G0029516.1 mouse_genomes_project 5 73100400 73152348 - Txk protein_coding retained_intron MGP_LPJ_T0071864.1 MGP_LPJ_G0029516.1 mouse_genomes_project 5 73148168 73152344 - Txk protein_coding retained_intron MGP_LPJ_T0015055.1 MGP_LPJ_G0013146.1 mouse_genomes_project 5 109156936 109157678 + processed_pseudogene processed_pseudogene MGP_LPJ_T0014860.1 MGP_LPJ_G0012951.1 mouse_genomes_project 5 23727608 23727882 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001927.1 MGP_LPJ_G0001837.1 mouse_genomes_project 5 149737096 149740357 + TEC TEC MGP_LPJ_T0099611.1 MGP_LPJ_G0037874.1 mouse_genomes_project 5 118936867 118937008 + Gm24265 snRNA snRNA MGP_LPJ_T0014826.1 MGP_LPJ_G0012917.1 mouse_genomes_project 5 17075398 17075639 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011601.1 MGP_LPJ_G0009719.1 mouse_genomes_project 5 6138379 6138521 - Gm27941 misc_RNA misc_RNA MGP_LPJ_T0069765.1 MGP_LPJ_G0029161.1 mouse_genomes_project 5 425282 438045 + MGP_LPJ_P0069765 1700109H08Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0069766.1 MGP_LPJ_G0029161.1 mouse_genomes_project 5 425389 438060 + MGP_LPJ_P0069766 1700109H08Rik protein_coding protein_coding MGP_LPJ_T0069767.1 MGP_LPJ_G0029161.1 mouse_genomes_project 5 429393 438060 + MGP_LPJ_P0069767 1700109H08Rik protein_coding protein_coding MGP_LPJ_T0069768.1 MGP_LPJ_G0029161.1 mouse_genomes_project 5 431944 434161 + 1700109H08Rik protein_coding retained_intron MGP_LPJ_T0069769.1 MGP_LPJ_G0029161.1 mouse_genomes_project 5 434209 438048 + MGP_LPJ_P0069769 1700109H08Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0074859.1 MGP_LPJ_G0030109.1 mouse_genomes_project 5 141272059 141302446 - MGP_LPJ_P0074859 Sh2b2 protein_coding protein_coding MGP_LPJ_T0074860.1 MGP_LPJ_G0030109.1 mouse_genomes_project 5 141272061 141302495 - MGP_LPJ_P0074860 Sh2b2 protein_coding protein_coding MGP_LPJ_T0074861.1 MGP_LPJ_G0030109.1 mouse_genomes_project 5 141274279 141276575 - Sh2b2 protein_coding retained_intron MGP_LPJ_T0074862.1 MGP_LPJ_G0030109.1 mouse_genomes_project 5 141277681 141302429 - MGP_LPJ_P0074862 Sh2b2 protein_coding protein_coding MGP_LPJ_T0074863.1 MGP_LPJ_G0030109.1 mouse_genomes_project 5 141289554 141305866 - MGP_LPJ_P0074863 Sh2b2 protein_coding protein_coding MGP_LPJ_T0072520.1 MGP_LPJ_G0029665.1 mouse_genomes_project 5 98097557 98155229 + MGP_LPJ_P0072520 Mrpl1 protein_coding protein_coding MGP_LPJ_T0072521.1 MGP_LPJ_G0029665.1 mouse_genomes_project 5 98098179 98155211 + MGP_LPJ_P0072521 Mrpl1 protein_coding protein_coding MGP_LPJ_T0072522.1 MGP_LPJ_G0029665.1 mouse_genomes_project 5 98098208 98128239 + MGP_LPJ_P0072522 Mrpl1 protein_coding protein_coding MGP_LPJ_T0015126.1 MGP_LPJ_G0013217.1 mouse_genomes_project 5 143421160 143421362 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015044.1 MGP_LPJ_G0013135.1 mouse_genomes_project 5 105839535 105840111 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001652.1 MGP_LPJ_G0001565.1 mouse_genomes_project 5 64275569 64277882 + TEC TEC MGP_LPJ_T0008247.1 MGP_LPJ_G0006720.1 mouse_genomes_project 5 103035946 103039664 - Gm36793 lincRNA lincRNA MGP_LPJ_T0001721.1 MGP_LPJ_G0001633.1 mouse_genomes_project 5 74666923 74670809 - TEC TEC MGP_LPJ_T0098272.1 MGP_LPJ_G0036553.1 mouse_genomes_project 5 76605091 76605214 - Gm24738 rRNA rRNA MGP_LPJ_T0071201.1 MGP_LPJ_G0029402.1 mouse_genomes_project 5 36271917 36548938 - MGP_LPJ_P0071201 Stk32b protein_coding protein_coding MGP_LPJ_T0070199.1 MGP_LPJ_G0029233.1 mouse_genomes_project 5 22004824 22016793 - Fam126a protein_coding processed_transcript MGP_LPJ_T0070200.1 MGP_LPJ_G0029233.1 mouse_genomes_project 5 22004825 22142017 - MGP_LPJ_P0070200 Fam126a protein_coding protein_coding MGP_LPJ_T0070201.1 MGP_LPJ_G0029233.1 mouse_genomes_project 5 22066630 22109129 - MGP_LPJ_P0070201 Fam126a protein_coding protein_coding MGP_LPJ_T0070202.1 MGP_LPJ_G0029233.1 mouse_genomes_project 5 22088338 22091494 - Fam126a protein_coding retained_intron MGP_LPJ_T0070203.1 MGP_LPJ_G0029233.1 mouse_genomes_project 5 22095298 22142010 - Fam126a protein_coding processed_transcript MGP_LPJ_T0069854.1 MGP_LPJ_G0029175.1 mouse_genomes_project 5 2437209 2476259 - MGP_LPJ_P0069854 1700015F17Rik protein_coding protein_coding MGP_LPJ_T0069855.1 MGP_LPJ_G0029175.1 mouse_genomes_project 5 2437209 2458998 - MGP_LPJ_P0069855 1700015F17Rik protein_coding protein_coding MGP_LPJ_T0069856.1 MGP_LPJ_G0029175.1 mouse_genomes_project 5 2437214 2476196 - MGP_LPJ_P0069856 1700015F17Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0001886.1 MGP_LPJ_G0001797.1 mouse_genomes_project 5 136761952 136762926 - TEC TEC MGP_LPJ_T0071220.1 MGP_LPJ_G0029407.1 mouse_genomes_project 5 37045285 37061892 - Zbtb49 protein_coding processed_transcript MGP_LPJ_T0071221.1 MGP_LPJ_G0029407.1 mouse_genomes_project 5 37055630 37076166 - MGP_LPJ_P0071221 Zbtb49 protein_coding protein_coding MGP_LPJ_T0071222.1 MGP_LPJ_G0029407.1 mouse_genomes_project 5 37055796 37076122 - MGP_LPJ_P0071222 Zbtb49 protein_coding nonsense_mediated_decay MGP_LPJ_T0071223.1 MGP_LPJ_G0029407.1 mouse_genomes_project 5 37055799 37076134 - MGP_LPJ_P0071223 Zbtb49 protein_coding nonsense_mediated_decay MGP_LPJ_T0071224.1 MGP_LPJ_G0029407.1 mouse_genomes_project 5 37056184 37076136 - MGP_LPJ_P0071224 Zbtb49 protein_coding nonsense_mediated_decay MGP_LPJ_T0071225.1 MGP_LPJ_G0029407.1 mouse_genomes_project 5 37056184 37076134 - MGP_LPJ_P0071225 Zbtb49 protein_coding nonsense_mediated_decay MGP_LPJ_T0071226.1 MGP_LPJ_G0029407.1 mouse_genomes_project 5 37058918 37059468 - MGP_LPJ_P0071226 Zbtb49 protein_coding protein_coding MGP_LPJ_T0071227.1 MGP_LPJ_G0029407.1 mouse_genomes_project 5 37059419 37069261 - MGP_LPJ_P0071227 Zbtb49 protein_coding nonsense_mediated_decay MGP_LPJ_T0071228.1 MGP_LPJ_G0029407.1 mouse_genomes_project 5 37059475 37076140 - MGP_LPJ_P0071228 Zbtb49 protein_coding nonsense_mediated_decay MGP_LPJ_T0071229.1 MGP_LPJ_G0029407.1 mouse_genomes_project 5 37067746 37076163 - MGP_LPJ_P0071229 Zbtb49 protein_coding protein_coding MGP_LPJ_T0071230.1 MGP_LPJ_G0029407.1 mouse_genomes_project 5 37071087 37076133 - Zbtb49 protein_coding retained_intron MGP_LPJ_T0015138.1 MGP_LPJ_G0013229.1 mouse_genomes_project 5 148968987 148969207 + processed_pseudogene processed_pseudogene MGP_LPJ_T0075334.1 MGP_LPJ_G0030202.1 mouse_genomes_project 5 146097488 146127277 + MGP_LPJ_P0075334 Eif3b protein_coding protein_coding MGP_LPJ_T0075335.1 MGP_LPJ_G0030202.1 mouse_genomes_project 5 146105251 146108833 + Eif3b protein_coding retained_intron MGP_LPJ_T0075336.1 MGP_LPJ_G0030202.1 mouse_genomes_project 5 146120317 146126614 + MGP_LPJ_P0075336 Eif3b protein_coding protein_coding MGP_LPJ_T0071685.1 MGP_LPJ_G0029487.1 mouse_genomes_project 5 66213704 66300338 - MGP_LPJ_P0071685 Rbm47 protein_coding protein_coding MGP_LPJ_T0071686.1 MGP_LPJ_G0029487.1 mouse_genomes_project 5 66213704 66384001 - MGP_LPJ_P0071686 Rbm47 protein_coding protein_coding MGP_LPJ_T0071687.1 MGP_LPJ_G0029487.1 mouse_genomes_project 5 66213711 66281757 - MGP_LPJ_P0071687 Rbm47 protein_coding protein_coding MGP_LPJ_T0071688.1 MGP_LPJ_G0029487.1 mouse_genomes_project 5 66213712 66360628 - MGP_LPJ_P0071688 Rbm47 protein_coding protein_coding MGP_LPJ_T0071689.1 MGP_LPJ_G0029487.1 mouse_genomes_project 5 66215757 66359782 - MGP_LPJ_P0071689 Rbm47 protein_coding protein_coding MGP_LPJ_T0071690.1 MGP_LPJ_G0029487.1 mouse_genomes_project 5 66215757 66359782 - MGP_LPJ_P0071690 Rbm47 protein_coding protein_coding MGP_LPJ_T0071691.1 MGP_LPJ_G0029487.1 mouse_genomes_project 5 66216138 66281856 - MGP_LPJ_P0071691 Rbm47 protein_coding protein_coding MGP_LPJ_T0071692.1 MGP_LPJ_G0029487.1 mouse_genomes_project 5 66222675 66359660 - Rbm47 protein_coding retained_intron MGP_LPJ_T0071693.1 MGP_LPJ_G0029487.1 mouse_genomes_project 5 66223918 66252011 - MGP_LPJ_P0071693 Rbm47 protein_coding protein_coding MGP_LPJ_T0071694.1 MGP_LPJ_G0029487.1 mouse_genomes_project 5 66224161 66282747 - Rbm47 protein_coding processed_transcript MGP_LPJ_T0071695.1 MGP_LPJ_G0029487.1 mouse_genomes_project 5 66224353 66281741 - MGP_LPJ_P0071695 Rbm47 protein_coding protein_coding MGP_LPJ_T0071696.1 MGP_LPJ_G0029487.1 mouse_genomes_project 5 66224373 66360027 - MGP_LPJ_P0071696 Rbm47 protein_coding protein_coding MGP_LPJ_T0071697.1 MGP_LPJ_G0029487.1 mouse_genomes_project 5 66243572 66360492 - Rbm47 protein_coding processed_transcript MGP_LPJ_T0071698.1 MGP_LPJ_G0029487.1 mouse_genomes_project 5 66243687 66360486 - Rbm47 protein_coding processed_transcript MGP_LPJ_T0008348.1 MGP_LPJ_G0006785.1 mouse_genomes_project 5 122642873 122650722 + Gm43342 lincRNA lincRNA MGP_LPJ_T0102202.1 MGP_LPJ_G0040239.1 mouse_genomes_project 5 152108026 152117029 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0075101.1 MGP_LPJ_G0030156.1 mouse_genomes_project 5 143396984 143422069 + MGP_LPJ_P0075101 Zkscan1 protein_coding protein_coding MGP_LPJ_T0075102.1 MGP_LPJ_G0030156.1 mouse_genomes_project 5 143396984 143422069 + MGP_LPJ_P0075102 Zkscan1 protein_coding protein_coding MGP_LPJ_T0075103.1 MGP_LPJ_G0030156.1 mouse_genomes_project 5 143397020 143418745 + MGP_LPJ_P0075103 Zkscan1 protein_coding protein_coding MGP_LPJ_T0075104.1 MGP_LPJ_G0030156.1 mouse_genomes_project 5 143405102 143418744 + MGP_LPJ_P0075104 Zkscan1 protein_coding protein_coding MGP_LPJ_T0072559.1 MGP_LPJ_G0029677.1 mouse_genomes_project 5 100845771 100868477 + MGP_LPJ_P0072559 Bmp3 protein_coding protein_coding MGP_LPJ_T0072560.1 MGP_LPJ_G0029677.1 mouse_genomes_project 5 100845795 100879175 + MGP_LPJ_P0072560 Bmp3 protein_coding protein_coding MGP_LPJ_T0072561.1 MGP_LPJ_G0029677.1 mouse_genomes_project 5 100845807 100879175 + MGP_LPJ_P0072561 Bmp3 protein_coding protein_coding MGP_LPJ_T0014832.1 MGP_LPJ_G0012923.1 mouse_genomes_project 5 19072699 19074095 + processed_pseudogene processed_pseudogene MGP_LPJ_T0074515.1 MGP_LPJ_G0030051.1 mouse_genomes_project 5 135556573 135558535 - MGP_LPJ_P0074515 unknown_likely_coding unknown_likely_coding MGP_LPJ_T0001870.1 MGP_LPJ_G0001781.1 mouse_genomes_project 5 134756844 134757342 + TEC TEC MGP_LPJ_T0015161.1 MGP_LPJ_G0013252.1 mouse_genomes_project 5 153674217 153674683 - processed_pseudogene processed_pseudogene MGP_LPJ_T0072192.1 MGP_LPJ_G0029576.1 mouse_genomes_project 5 88175179 88192191 - MGP_LPJ_P0072192 Ugt2b34 protein_coding protein_coding MGP_LPJ_T0072193.1 MGP_LPJ_G0029576.1 mouse_genomes_project 5 88175179 88192191 - MGP_LPJ_P0072193 Ugt2b34 protein_coding protein_coding MGP_LPJ_T0001868.1 MGP_LPJ_G0001779.1 mouse_genomes_project 5 134557522 134560907 + TEC TEC MGP_LPJ_T0070941.1 MGP_LPJ_G0029363.1 mouse_genomes_project 5 32990180 33007306 + MGP_LPJ_P0070941 Rnf4 protein_coding protein_coding MGP_LPJ_T0070942.1 MGP_LPJ_G0029363.1 mouse_genomes_project 5 32990219 33004394 + Rnf4 protein_coding retained_intron MGP_LPJ_T0070943.1 MGP_LPJ_G0029363.1 mouse_genomes_project 5 32990271 33007303 + MGP_LPJ_P0070943 Rnf4 protein_coding protein_coding MGP_LPJ_T0070944.1 MGP_LPJ_G0029363.1 mouse_genomes_project 5 32990281 33003900 + Rnf4 protein_coding processed_transcript MGP_LPJ_T0070945.1 MGP_LPJ_G0029363.1 mouse_genomes_project 5 32990308 33001001 + Rnf4 protein_coding retained_intron MGP_LPJ_T0070946.1 MGP_LPJ_G0029363.1 mouse_genomes_project 5 32990310 32996520 + Rnf4 protein_coding processed_transcript MGP_LPJ_T0070947.1 MGP_LPJ_G0029363.1 mouse_genomes_project 5 32990315 33001293 + Rnf4 protein_coding retained_intron MGP_LPJ_T0070948.1 MGP_LPJ_G0029363.1 mouse_genomes_project 5 32990337 33003735 + Rnf4 protein_coding retained_intron MGP_LPJ_T0070949.1 MGP_LPJ_G0029363.1 mouse_genomes_project 5 32990576 33003897 + MGP_LPJ_P0070949 Rnf4 protein_coding protein_coding MGP_LPJ_T0070950.1 MGP_LPJ_G0029363.1 mouse_genomes_project 5 32990823 33007291 + MGP_LPJ_P0070950 Rnf4 protein_coding protein_coding MGP_LPJ_T0070951.1 MGP_LPJ_G0029363.1 mouse_genomes_project 5 32991210 32996556 + Rnf4 protein_coding processed_transcript MGP_LPJ_T0070952.1 MGP_LPJ_G0029363.1 mouse_genomes_project 5 33004982 33009496 + Rnf4 protein_coding retained_intron MGP_LPJ_T0074899.1 MGP_LPJ_G0030114.1 mouse_genomes_project 5 142093380 142107933 + MGP_LPJ_P0074899 Fis1 protein_coding protein_coding MGP_LPJ_T0074900.1 MGP_LPJ_G0030114.1 mouse_genomes_project 5 142093511 142107850 + MGP_LPJ_P0074900 Fis1 protein_coding protein_coding MGP_LPJ_T0074901.1 MGP_LPJ_G0030114.1 mouse_genomes_project 5 142103792 142107935 + MGP_LPJ_P0074901 Fis1 protein_coding protein_coding MGP_LPJ_T0074902.1 MGP_LPJ_G0030114.1 mouse_genomes_project 5 142104148 142107658 + Fis1 protein_coding processed_transcript MGP_LPJ_T0074903.1 MGP_LPJ_G0030114.1 mouse_genomes_project 5 142104159 142107811 + Fis1 protein_coding processed_transcript MGP_LPJ_T0074904.1 MGP_LPJ_G0030114.1 mouse_genomes_project 5 142104560 142107712 + Fis1 protein_coding processed_transcript MGP_LPJ_T0015173.1 MGP_LPJ_G0013264.1 mouse_genomes_project 5 157107759 157109309 - processed_pseudogene processed_pseudogene MGP_LPJ_T0071353.1 MGP_LPJ_G0029430.1 mouse_genomes_project 5 43592972 43951406 - MGP_LPJ_P0071353 Ldb2 protein_coding protein_coding MGP_LPJ_T0071354.1 MGP_LPJ_G0029430.1 mouse_genomes_project 5 43592972 43951447 - MGP_LPJ_P0071354 Ldb2 protein_coding protein_coding MGP_LPJ_T0071355.1 MGP_LPJ_G0029430.1 mouse_genomes_project 5 43592972 43951386 - MGP_LPJ_P0071355 Ldb2 protein_coding protein_coding MGP_LPJ_T0071356.1 MGP_LPJ_G0029430.1 mouse_genomes_project 5 43592980 43951369 - MGP_LPJ_P0071356 Ldb2 protein_coding protein_coding MGP_LPJ_T0071357.1 MGP_LPJ_G0029430.1 mouse_genomes_project 5 43599961 43726820 - Ldb2 protein_coding processed_transcript MGP_LPJ_T0071358.1 MGP_LPJ_G0029430.1 mouse_genomes_project 5 43655443 43663334 - Ldb2 protein_coding processed_transcript MGP_LPJ_T0071359.1 MGP_LPJ_G0029430.1 mouse_genomes_project 5 43669831 43951419 - Ldb2 protein_coding retained_intron MGP_LPJ_T0008243.1 MGP_LPJ_G0006719.1 mouse_genomes_project 5 102517069 102527222 - 5430416N02Rik lincRNA lincRNA MGP_LPJ_T0008244.1 MGP_LPJ_G0006719.1 mouse_genomes_project 5 102519882 102527203 - 5430416N02Rik lincRNA lincRNA MGP_LPJ_T0008245.1 MGP_LPJ_G0006719.1 mouse_genomes_project 5 102526422 102527062 - 5430416N02Rik lincRNA lincRNA MGP_LPJ_T0008246.1 MGP_LPJ_G0006719.1 mouse_genomes_project 5 102526680 102527202 - 5430416N02Rik lincRNA lincRNA MGP_LPJ_T0001629.1 MGP_LPJ_G0001543.1 mouse_genomes_project 5 55102523 55106123 + TEC TEC MGP_LPJ_T0015050.1 MGP_LPJ_G0013141.1 mouse_genomes_project 5 107420095 107420377 - processed_pseudogene processed_pseudogene MGP_LPJ_T0069839.1 MGP_LPJ_G0029174.1 mouse_genomes_project 5 1766294 2255332 - MGP_LPJ_P0069839 Cdk14 protein_coding protein_coding MGP_LPJ_T0069840.1 MGP_LPJ_G0029174.1 mouse_genomes_project 5 1766294 2378759 - MGP_LPJ_P0069840 Cdk14 protein_coding protein_coding MGP_LPJ_T0069841.1 MGP_LPJ_G0029174.1 mouse_genomes_project 5 1768743 2254575 - MGP_LPJ_P0069841 Cdk14 protein_coding protein_coding MGP_LPJ_T0069842.1 MGP_LPJ_G0029174.1 mouse_genomes_project 5 1769598 2255429 - MGP_LPJ_P0069842 Cdk14 protein_coding protein_coding MGP_LPJ_T0069843.1 MGP_LPJ_G0029174.1 mouse_genomes_project 5 1860500 1863919 - Cdk14 protein_coding retained_intron MGP_LPJ_T0069844.1 MGP_LPJ_G0029174.1 mouse_genomes_project 5 1896778 2255246 - Cdk14 protein_coding retained_intron MGP_LPJ_T0069845.1 MGP_LPJ_G0029174.1 mouse_genomes_project 5 1908341 2013900 - Cdk14 protein_coding processed_transcript MGP_LPJ_T0069846.1 MGP_LPJ_G0029174.1 mouse_genomes_project 5 1983235 2378786 - Cdk14 protein_coding retained_intron MGP_LPJ_T0069847.1 MGP_LPJ_G0029174.1 mouse_genomes_project 5 2072773 2378813 - Cdk14 protein_coding retained_intron MGP_LPJ_T0069848.1 MGP_LPJ_G0029174.1 mouse_genomes_project 5 2106730 2378755 - Cdk14 protein_coding retained_intron MGP_LPJ_T0069849.1 MGP_LPJ_G0029174.1 mouse_genomes_project 5 2162279 2173036 - Cdk14 protein_coding processed_transcript MGP_LPJ_T0069850.1 MGP_LPJ_G0029174.1 mouse_genomes_project 5 2213122 2255556 - MGP_LPJ_P0069850 Cdk14 protein_coding protein_coding MGP_LPJ_T0069851.1 MGP_LPJ_G0029174.1 mouse_genomes_project 5 2213123 2420394 - MGP_LPJ_P0069851 Cdk14 protein_coding protein_coding MGP_LPJ_T0069852.1 MGP_LPJ_G0029174.1 mouse_genomes_project 5 2238456 2255567 - Cdk14 protein_coding processed_transcript MGP_LPJ_T0069853.1 MGP_LPJ_G0029174.1 mouse_genomes_project 5 2290450 2378755 - Cdk14 protein_coding processed_transcript MGP_LPJ_T0070383.1 MGP_LPJ_G0029273.1 mouse_genomes_project 5 27560421 27567564 + MGP_LPJ_P0070383 Rnf32 protein_coding protein_coding MGP_LPJ_T0070384.1 MGP_LPJ_G0029273.1 mouse_genomes_project 5 27560422 27592285 + MGP_LPJ_P0070384 Rnf32 protein_coding nonsense_mediated_decay MGP_LPJ_T0070385.1 MGP_LPJ_G0029273.1 mouse_genomes_project 5 27560424 27563176 + MGP_LPJ_P0070385 Rnf32 protein_coding protein_coding MGP_LPJ_T0070386.1 MGP_LPJ_G0029273.1 mouse_genomes_project 5 27560426 27592326 + MGP_LPJ_P0070386 Rnf32 protein_coding protein_coding MGP_LPJ_T0070387.1 MGP_LPJ_G0029273.1 mouse_genomes_project 5 27560432 27567624 + MGP_LPJ_P0070387 Rnf32 protein_coding protein_coding MGP_LPJ_T0070388.1 MGP_LPJ_G0029273.1 mouse_genomes_project 5 27560435 27592328 + MGP_LPJ_P0070388 Rnf32 protein_coding protein_coding MGP_LPJ_T0070389.1 MGP_LPJ_G0029273.1 mouse_genomes_project 5 27560487 27572080 + Rnf32 protein_coding retained_intron MGP_LPJ_T0070390.1 MGP_LPJ_G0029273.1 mouse_genomes_project 5 27560513 27562420 + Rnf32 protein_coding processed_transcript MGP_LPJ_T0070391.1 MGP_LPJ_G0029273.1 mouse_genomes_project 5 27561016 27567513 + MGP_LPJ_P0070391 Rnf32 protein_coding protein_coding MGP_LPJ_T0070392.1 MGP_LPJ_G0029273.1 mouse_genomes_project 5 27562434 27592095 + MGP_LPJ_P0070392 Rnf32 protein_coding protein_coding MGP_LPJ_T0070393.1 MGP_LPJ_G0029273.1 mouse_genomes_project 5 27563099 27592105 + MGP_LPJ_P0070393 Rnf32 protein_coding protein_coding MGP_LPJ_T0070394.1 MGP_LPJ_G0029273.1 mouse_genomes_project 5 27590589 27595261 + Rnf32 protein_coding retained_intron MGP_LPJ_T0008431.1 MGP_LPJ_G0006837.1 mouse_genomes_project 5 142467422 142482034 - Gm42456 lincRNA lincRNA MGP_LPJ_T0071498.1 MGP_LPJ_G0029453.1 mouse_genomes_project 5 52763908 52765417 + Smim20 protein_coding retained_intron MGP_LPJ_T0071499.1 MGP_LPJ_G0029453.1 mouse_genomes_project 5 52763963 52775366 + MGP_LPJ_P0071499 Smim20 protein_coding nonsense_mediated_decay MGP_LPJ_T0071500.1 MGP_LPJ_G0029453.1 mouse_genomes_project 5 52763963 52775366 + MGP_LPJ_P0071500 Smim20 protein_coding protein_coding MGP_LPJ_T0071501.1 MGP_LPJ_G0029453.1 mouse_genomes_project 5 52764002 52775366 + MGP_LPJ_P0071501 Smim20 protein_coding nonsense_mediated_decay MGP_LPJ_T0071502.1 MGP_LPJ_G0029453.1 mouse_genomes_project 5 52764015 52766091 + Smim20 protein_coding retained_intron MGP_LPJ_T0071503.1 MGP_LPJ_G0029453.1 mouse_genomes_project 5 52773943 52774852 + Smim20 protein_coding retained_intron MGP_LPJ_T0010741.1 MGP_LPJ_G0008859.1 mouse_genomes_project 5 140362086 140362167 - Mir7033 miRNA miRNA MGP_LPJ_T0071582.1 MGP_LPJ_G0029471.1 mouse_genomes_project 5 65158668 65197028 - Tmem156 protein_coding processed_transcript MGP_LPJ_T0071583.1 MGP_LPJ_G0029471.1 mouse_genomes_project 5 65167929 65196983 - MGP_LPJ_P0071583 Tmem156 protein_coding protein_coding MGP_LPJ_T0071584.1 MGP_LPJ_G0029471.1 mouse_genomes_project 5 65170477 65185381 - MGP_LPJ_P0071584 Tmem156 protein_coding unknown_likely_coding MGP_LPJ_T0071585.1 MGP_LPJ_G0029471.1 mouse_genomes_project 5 65196095 65197024 - Tmem156 protein_coding retained_intron MGP_LPJ_T0074302.1 MGP_LPJ_G0030009.1 mouse_genomes_project 5 129328466 129337764 + MGP_LPJ_P0074302 Fam101a protein_coding protein_coding MGP_LPJ_T0074303.1 MGP_LPJ_G0030009.1 mouse_genomes_project 5 129328720 129337763 + MGP_LPJ_P0074303 Fam101a protein_coding protein_coding MGP_LPJ_T0074304.1 MGP_LPJ_G0030009.1 mouse_genomes_project 5 129335327 129336707 + Fam101a protein_coding processed_transcript MGP_LPJ_T0074392.1 MGP_LPJ_G0030027.1 mouse_genomes_project 5 133668555 133797415 + MGP_LPJ_P0074392 Adgrd1 protein_coding protein_coding MGP_LPJ_T0074393.1 MGP_LPJ_G0030027.1 mouse_genomes_project 5 133668562 133672333 + Adgrd1 protein_coding retained_intron MGP_LPJ_T0074394.1 MGP_LPJ_G0030027.1 mouse_genomes_project 5 133668562 133796496 + MGP_LPJ_P0074394 Adgrd1 protein_coding protein_coding MGP_LPJ_T0001839.1 MGP_LPJ_G0001751.1 mouse_genomes_project 5 126749555 126750117 - TEC TEC MGP_LPJ_T0015075.1 MGP_LPJ_G0013166.1 mouse_genomes_project 5 112653805 112654168 - processed_pseudogene processed_pseudogene MGP_LPJ_T0070136.1 MGP_LPJ_G0029224.1 mouse_genomes_project 5 19793313 19859732 - MGP_LPJ_P0070136 Slc26a5 protein_coding protein_coding MGP_LPJ_T0070137.1 MGP_LPJ_G0029224.1 mouse_genomes_project 5 19793313 19856126 - MGP_LPJ_P0070137 Slc26a5 protein_coding protein_coding MGP_LPJ_T0070138.1 MGP_LPJ_G0029224.1 mouse_genomes_project 5 19793676 19841625 - MGP_LPJ_P0070138 Slc26a5 protein_coding nonsense_mediated_decay MGP_LPJ_T0070139.1 MGP_LPJ_G0029224.1 mouse_genomes_project 5 19793807 19841577 - MGP_LPJ_P0070139 Slc26a5 protein_coding protein_coding MGP_LPJ_T0070140.1 MGP_LPJ_G0029224.1 mouse_genomes_project 5 19800060 19813519 - Slc26a5 protein_coding retained_intron MGP_LPJ_T0008422.1 MGP_LPJ_G0006831.1 mouse_genomes_project 5 138948059 138948856 - Gm15627 lincRNA lincRNA MGP_LPJ_T0014855.1 MGP_LPJ_G0012946.1 mouse_genomes_project 5 22352098 22353619 + processed_pseudogene processed_pseudogene MGP_LPJ_T0070610.1 MGP_LPJ_G0029313.1 mouse_genomes_project 5 29583555 29599533 - Gm29609 protein_coding processed_transcript MGP_LPJ_T0070613.1 MGP_LPJ_G0029313.1 mouse_genomes_project 5 29592519 29623300 - MGP_LPJ_P0070613 Gm29609 protein_coding protein_coding MGP_LPJ_T0010698.1 MGP_LPJ_G0008816.1 mouse_genomes_project 5 40924175 40924257 + Mir6414 miRNA miRNA MGP_LPJ_T0071526.1 MGP_LPJ_G0029458.1 mouse_genomes_project 5 57390406 57833670 + MGP_LPJ_P0071526 Pcdh7 protein_coding protein_coding MGP_LPJ_T0071527.1 MGP_LPJ_G0029458.1 mouse_genomes_project 5 57390459 57406038 + MGP_LPJ_P0071527 Pcdh7 protein_coding protein_coding MGP_LPJ_T0071528.1 MGP_LPJ_G0029458.1 mouse_genomes_project 5 57391536 57829791 + MGP_LPJ_P0071528 Pcdh7 protein_coding protein_coding MGP_LPJ_T0071529.1 MGP_LPJ_G0029458.1 mouse_genomes_project 5 57392562 57604930 + MGP_LPJ_P0071529 Pcdh7 protein_coding protein_coding MGP_LPJ_T0071530.1 MGP_LPJ_G0029458.1 mouse_genomes_project 5 57393601 57830237 + MGP_LPJ_P0071530 Pcdh7 protein_coding nonsense_mediated_decay MGP_LPJ_T0071531.1 MGP_LPJ_G0029458.1 mouse_genomes_project 5 57394352 57602392 + MGP_LPJ_P0071531 Pcdh7 protein_coding protein_coding MGP_LPJ_T0071532.1 MGP_LPJ_G0029458.1 mouse_genomes_project 5 57394648 57829894 + MGP_LPJ_P0071532 Pcdh7 protein_coding protein_coding MGP_LPJ_T0014851.1 MGP_LPJ_G0012942.1 mouse_genomes_project 5 22119271 22121243 - processed_pseudogene processed_pseudogene MGP_LPJ_T0074540.1 MGP_LPJ_G0030054.1 mouse_genomes_project 5 138949358 138994877 + MGP_LPJ_P0074540 Gatsl2 protein_coding protein_coding MGP_LPJ_T0074541.1 MGP_LPJ_G0030054.1 mouse_genomes_project 5 138949672 138994864 + Gatsl2 protein_coding processed_transcript MGP_LPJ_T0074542.1 MGP_LPJ_G0030054.1 mouse_genomes_project 5 138985495 138988084 + Gatsl2 protein_coding retained_intron MGP_LPJ_T0098614.1 MGP_LPJ_G0036888.1 mouse_genomes_project 5 2295004 2297635 - Gm43727 sense_intronic sense_intronic MGP_LPJ_T0070930.1 MGP_LPJ_G0029360.1 mouse_genomes_project 5 32806019 32807473 - Mxd4 protein_coding processed_transcript MGP_LPJ_T0070931.1 MGP_LPJ_G0029360.1 mouse_genomes_project 5 32806023 32819823 - MGP_LPJ_P0070931 Mxd4 protein_coding protein_coding MGP_LPJ_T0070932.1 MGP_LPJ_G0029360.1 mouse_genomes_project 5 32808691 32819833 - MGP_LPJ_P0070932 Mxd4 protein_coding protein_coding MGP_LPJ_T0070933.1 MGP_LPJ_G0029360.1 mouse_genomes_project 5 32811856 32816483 - Mxd4 protein_coding retained_intron MGP_LPJ_T0014905.1 MGP_LPJ_G0012996.1 mouse_genomes_project 5 38311273 38312172 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001861.1 MGP_LPJ_G0001772.1 mouse_genomes_project 5 132746814 132748777 - TEC TEC MGP_LPJ_T0075054.1 MGP_LPJ_G0030144.1 mouse_genomes_project 5 142901971 142943544 - MGP_LPJ_P0075054 Agfg2 protein_coding protein_coding MGP_LPJ_T0075055.1 MGP_LPJ_G0030144.1 mouse_genomes_project 5 142901993 142943498 - MGP_LPJ_P0075055 Agfg2 protein_coding protein_coding MGP_LPJ_T0075056.1 MGP_LPJ_G0030144.1 mouse_genomes_project 5 142902381 142913510 - Agfg2 protein_coding retained_intron MGP_LPJ_T0075057.1 MGP_LPJ_G0030144.1 mouse_genomes_project 5 142905397 142943544 - MGP_LPJ_P0075057 Agfg2 protein_coding protein_coding MGP_LPJ_T0075058.1 MGP_LPJ_G0030144.1 mouse_genomes_project 5 142907299 142916073 - MGP_LPJ_P0075058 Agfg2 protein_coding protein_coding MGP_LPJ_T0075059.1 MGP_LPJ_G0030144.1 mouse_genomes_project 5 142914566 142943511 - Agfg2 protein_coding retained_intron MGP_LPJ_T0070058.1 MGP_LPJ_G0029208.1 mouse_genomes_project 5 17099743 18636089 + MGP_LPJ_P0070058 Magi2 protein_coding protein_coding MGP_LPJ_T0070059.1 MGP_LPJ_G0029208.1 mouse_genomes_project 5 17099753 17683037 + Magi2 protein_coding processed_transcript MGP_LPJ_T0070060.1 MGP_LPJ_G0029208.1 mouse_genomes_project 5 17099758 18636073 + MGP_LPJ_P0070060 Magi2 protein_coding protein_coding MGP_LPJ_T0070061.1 MGP_LPJ_G0029208.1 mouse_genomes_project 5 17099762 18637943 + MGP_LPJ_P0070061 Magi2 protein_coding protein_coding MGP_LPJ_T0070062.1 MGP_LPJ_G0029208.1 mouse_genomes_project 5 17100104 17103958 + Magi2 protein_coding retained_intron MGP_LPJ_T0070063.1 MGP_LPJ_G0029208.1 mouse_genomes_project 5 17819317 18637962 + MGP_LPJ_P0070063 Magi2 protein_coding protein_coding MGP_LPJ_T0070064.1 MGP_LPJ_G0029208.1 mouse_genomes_project 5 17819508 18636095 + MGP_LPJ_P0070064 Magi2 protein_coding protein_coding MGP_LPJ_T0070065.1 MGP_LPJ_G0029208.1 mouse_genomes_project 5 17819724 18105588 + MGP_LPJ_P0070065 Magi2 protein_coding protein_coding MGP_LPJ_T0070066.1 MGP_LPJ_G0029208.1 mouse_genomes_project 5 18114059 18377343 + Magi2 protein_coding processed_transcript MGP_LPJ_T0070067.1 MGP_LPJ_G0029208.1 mouse_genomes_project 5 18141073 18579683 + Magi2 protein_coding retained_intron MGP_LPJ_T0070068.1 MGP_LPJ_G0029208.1 mouse_genomes_project 5 18452157 18525014 + Magi2 protein_coding processed_transcript MGP_LPJ_T0070069.1 MGP_LPJ_G0029208.1 mouse_genomes_project 5 18526700 18635523 + MGP_LPJ_P0070069 Magi2 protein_coding protein_coding MGP_LPJ_T0070070.1 MGP_LPJ_G0029208.1 mouse_genomes_project 5 18634838 18635973 + Magi2 protein_coding processed_transcript MGP_LPJ_T0072366.1 MGP_LPJ_G0029633.1 mouse_genomes_project 5 92377515 92379583 + MGP_LPJ_P0072366 Cxcl2 protein_coding protein_coding MGP_LPJ_T0072367.1 MGP_LPJ_G0029633.1 mouse_genomes_project 5 92377517 92379583 + Cxcl2 protein_coding retained_intron MGP_LPJ_T0072368.1 MGP_LPJ_G0029633.1 mouse_genomes_project 5 92377517 92378006 + Cxcl2 protein_coding retained_intron MGP_LPJ_T0072369.1 MGP_LPJ_G0029633.1 mouse_genomes_project 5 92377517 92379583 + MGP_LPJ_P0072369 Cxcl2 protein_coding protein_coding MGP_LPJ_T0099630.1 MGP_LPJ_G0037893.1 mouse_genomes_project 5 157147180 157147321 - Gm25284 snRNA snRNA MGP_LPJ_T0001890.1 MGP_LPJ_G0001801.1 mouse_genomes_project 5 136825294 136832619 - TEC TEC MGP_LPJ_T0070792.1 MGP_LPJ_G0029338.1 mouse_genomes_project 5 31342611 31411308 - MGP_LPJ_P0070792 protein_coding unknown_likely_coding MGP_LPJ_T0070793.1 MGP_LPJ_G0029338.1 mouse_genomes_project 5 31347032 31349498 - protein_coding retained_intron MGP_LPJ_T0070794.1 MGP_LPJ_G0029338.1 mouse_genomes_project 5 31392518 31411250 - MGP_LPJ_P0070794 protein_coding protein_coding MGP_LPJ_T0102189.1 MGP_LPJ_G0040226.1 mouse_genomes_project 5 102291465 102451455 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0075451.1 MGP_LPJ_G0030228.1 mouse_genomes_project 5 149156286 149170931 + MGP_LPJ_P0075451 Zfp12 protein_coding protein_coding MGP_LPJ_T0075452.1 MGP_LPJ_G0030228.1 mouse_genomes_project 5 149156297 149171817 + MGP_LPJ_P0075452 Zfp12 protein_coding protein_coding MGP_LPJ_T0075453.1 MGP_LPJ_G0030228.1 mouse_genomes_project 5 149156370 149170939 + MGP_LPJ_P0075453 Zfp12 protein_coding nonsense_mediated_decay MGP_LPJ_T0075454.1 MGP_LPJ_G0030228.1 mouse_genomes_project 5 149156902 149163063 + MGP_LPJ_P0075454 Zfp12 protein_coding protein_coding MGP_LPJ_T0075455.1 MGP_LPJ_G0030228.1 mouse_genomes_project 5 149163021 149167613 + Zfp12 protein_coding processed_transcript MGP_LPJ_T0015034.1 MGP_LPJ_G0013125.1 mouse_genomes_project 5 101636306 101637115 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015163.1 MGP_LPJ_G0013254.1 mouse_genomes_project 5 153802144 153802366 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001545.1 MGP_LPJ_G0001459.1 mouse_genomes_project 5 35965966 35968843 + TEC TEC MGP_LPJ_T0001561.1 MGP_LPJ_G0001475.1 mouse_genomes_project 5 43319122 43322601 - TEC TEC MGP_LPJ_T0100825.1 MGP_LPJ_G0039088.1 mouse_genomes_project 5 38432782 38432911 - Gm25377 snoRNA snoRNA MGP_LPJ_T0070235.1 MGP_LPJ_G0029241.1 mouse_genomes_project 5 22543858 22549148 - MGP_LPJ_P0070235 Cdk5 protein_coding protein_coding MGP_LPJ_T0070236.1 MGP_LPJ_G0029241.1 mouse_genomes_project 5 22544993 22549103 - MGP_LPJ_P0070236 Cdk5 protein_coding protein_coding MGP_LPJ_T0070237.1 MGP_LPJ_G0029241.1 mouse_genomes_project 5 22546616 22548313 - Cdk5 protein_coding retained_intron MGP_LPJ_T0098282.1 MGP_LPJ_G0036563.1 mouse_genomes_project 5 155795930 155796036 - n-R5s180 rRNA rRNA MGP_LPJ_T0100833.1 MGP_LPJ_G0039096.1 mouse_genomes_project 5 62103795 62103927 - Gm22273 snoRNA snoRNA MGP_LPJ_T0008485.1 MGP_LPJ_G0006879.1 mouse_genomes_project 5 156361675 156371417 - Gm21221 lincRNA lincRNA MGP_LPJ_T0008138.1 MGP_LPJ_G0006633.1 mouse_genomes_project 5 44121150 44133878 + 4930431F12Rik lincRNA lincRNA MGP_LPJ_T0001759.1 MGP_LPJ_G0001671.1 mouse_genomes_project 5 103009807 103012157 + TEC TEC MGP_LPJ_T0070468.1 MGP_LPJ_G0029289.1 mouse_genomes_project 5 28757831 28859582 - MGP_LPJ_P0070468 Otof protein_coding protein_coding MGP_LPJ_T0070469.1 MGP_LPJ_G0029289.1 mouse_genomes_project 5 28757831 28859552 - MGP_LPJ_P0070469 Otof protein_coding protein_coding MGP_LPJ_T0070470.1 MGP_LPJ_G0029289.1 mouse_genomes_project 5 28757837 28859582 - Otof protein_coding retained_intron MGP_LPJ_T0070471.1 MGP_LPJ_G0029289.1 mouse_genomes_project 5 28758063 28859509 - Otof protein_coding retained_intron MGP_LPJ_T0070472.1 MGP_LPJ_G0029289.1 mouse_genomes_project 5 28798109 28801259 - Otof protein_coding retained_intron MGP_LPJ_T0008433.1 MGP_LPJ_G0006839.1 mouse_genomes_project 5 142735603 142742949 + Gm8066 lincRNA lincRNA MGP_LPJ_T0001841.1 MGP_LPJ_G0001753.1 mouse_genomes_project 5 127115347 127116929 - TEC TEC MGP_LPJ_T0071493.1 MGP_LPJ_G0029452.1 mouse_genomes_project 5 52598435 52708315 - MGP_LPJ_P0071493 Sel1l3 protein_coding protein_coding MGP_LPJ_T0071494.1 MGP_LPJ_G0029452.1 mouse_genomes_project 5 52637790 52708185 - Sel1l3 protein_coding retained_intron MGP_LPJ_T0071495.1 MGP_LPJ_G0029452.1 mouse_genomes_project 5 52647248 52650619 - Sel1l3 protein_coding retained_intron MGP_LPJ_T0071496.1 MGP_LPJ_G0029452.1 mouse_genomes_project 5 52649533 52667037 - Sel1l3 protein_coding processed_transcript MGP_LPJ_T0071497.1 MGP_LPJ_G0029452.1 mouse_genomes_project 5 52693087 52709903 - Sel1l3 protein_coding retained_intron MGP_LPJ_T0101361.1 MGP_LPJ_G0039562.1 mouse_genomes_project 5 74827637 74828094 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0075787.1 MGP_LPJ_G0030302.1 mouse_genomes_project 5 155333585 155394765 - MGP_LPJ_P0075787 Katnal1 protein_coding unknown_likely_coding MGP_LPJ_T0075788.1 MGP_LPJ_G0030302.1 mouse_genomes_project 5 155333592 155394772 - MGP_LPJ_P0075788 Katnal1 protein_coding protein_coding MGP_LPJ_T0075789.1 MGP_LPJ_G0030302.1 mouse_genomes_project 5 155337691 155343900 - Katnal1 protein_coding retained_intron MGP_LPJ_T0075790.1 MGP_LPJ_G0030302.1 mouse_genomes_project 5 155351468 155395125 - Katnal1 protein_coding processed_transcript MGP_LPJ_T0075791.1 MGP_LPJ_G0030302.1 mouse_genomes_project 5 155359441 155395445 - MGP_LPJ_P0075791 Katnal1 protein_coding protein_coding MGP_LPJ_T0075793.1 MGP_LPJ_G0030302.1 mouse_genomes_project 5 155371958 155394753 - MGP_LPJ_P0075793 Katnal1 protein_coding protein_coding MGP_LPJ_T0075794.1 MGP_LPJ_G0030302.1 mouse_genomes_project 5 155390745 155394790 - Katnal1 protein_coding processed_transcript MGP_LPJ_T0001495.1 MGP_LPJ_G0001412.1 mouse_genomes_project 5 14371617 14372609 + TEC TEC MGP_LPJ_T0070988.1 MGP_LPJ_G0029368.1 mouse_genomes_project 5 33299364 33302912 - MGP_LPJ_P0070988 Mfsd10 protein_coding protein_coding MGP_LPJ_T0070989.1 MGP_LPJ_G0029368.1 mouse_genomes_project 5 33299368 33302935 - MGP_LPJ_P0070989 Mfsd10 protein_coding protein_coding MGP_LPJ_T0070990.1 MGP_LPJ_G0029368.1 mouse_genomes_project 5 33299369 33300450 - Mfsd10 protein_coding retained_intron MGP_LPJ_T0070991.1 MGP_LPJ_G0029368.1 mouse_genomes_project 5 33299370 33300352 - Mfsd10 protein_coding retained_intron MGP_LPJ_T0070992.1 MGP_LPJ_G0029368.1 mouse_genomes_project 5 33299371 33302915 - MGP_LPJ_P0070992 Mfsd10 protein_coding protein_coding MGP_LPJ_T0070993.1 MGP_LPJ_G0029368.1 mouse_genomes_project 5 33299447 33302530 - MGP_LPJ_P0070993 Mfsd10 protein_coding nonsense_mediated_decay MGP_LPJ_T0070994.1 MGP_LPJ_G0029368.1 mouse_genomes_project 5 33299637 33300614 - Mfsd10 protein_coding retained_intron MGP_LPJ_T0070995.1 MGP_LPJ_G0029368.1 mouse_genomes_project 5 33299717 33301847 - Mfsd10 protein_coding retained_intron MGP_LPJ_T0070996.1 MGP_LPJ_G0029368.1 mouse_genomes_project 5 33300036 33301248 - MGP_LPJ_P0070996 Mfsd10 protein_coding nonsense_mediated_decay MGP_LPJ_T0070997.1 MGP_LPJ_G0029368.1 mouse_genomes_project 5 33300353 33300788 - MGP_LPJ_P0070997 Mfsd10 protein_coding protein_coding MGP_LPJ_T0070998.1 MGP_LPJ_G0029368.1 mouse_genomes_project 5 33300377 33301839 - MGP_LPJ_P0070998 Mfsd10 protein_coding nonsense_mediated_decay MGP_LPJ_T0070999.1 MGP_LPJ_G0029368.1 mouse_genomes_project 5 33300573 33301478 - MGP_LPJ_P0070999 Mfsd10 protein_coding protein_coding MGP_LPJ_T0071000.1 MGP_LPJ_G0029368.1 mouse_genomes_project 5 33300654 33302912 - MGP_LPJ_P0071000 Mfsd10 protein_coding protein_coding MGP_LPJ_T0071001.1 MGP_LPJ_G0029368.1 mouse_genomes_project 5 33300779 33302564 - MGP_LPJ_P0071001 Mfsd10 protein_coding protein_coding MGP_LPJ_T0071002.1 MGP_LPJ_G0029368.1 mouse_genomes_project 5 33300786 33301346 - MGP_LPJ_P0071002 Mfsd10 protein_coding protein_coding MGP_LPJ_T0071003.1 MGP_LPJ_G0029368.1 mouse_genomes_project 5 33300810 33301224 - Mfsd10 protein_coding retained_intron MGP_LPJ_T0071004.1 MGP_LPJ_G0029368.1 mouse_genomes_project 5 33300832 33302848 - MGP_LPJ_P0071004 Mfsd10 protein_coding nonsense_mediated_decay MGP_LPJ_T0071005.1 MGP_LPJ_G0029368.1 mouse_genomes_project 5 33301108 33302245 - Mfsd10 protein_coding processed_transcript MGP_LPJ_T0071006.1 MGP_LPJ_G0029368.1 mouse_genomes_project 5 33301335 33302258 - Mfsd10 protein_coding processed_transcript MGP_LPJ_T0071007.1 MGP_LPJ_G0029368.1 mouse_genomes_project 5 33301751 33302783 - Mfsd10 protein_coding retained_intron MGP_LPJ_T0071008.1 MGP_LPJ_G0029368.1 mouse_genomes_project 5 33302316 33302863 - MGP_LPJ_P0071008 Mfsd10 protein_coding protein_coding MGP_LPJ_T0008500.1 MGP_LPJ_G0006890.1 mouse_genomes_project 5 158278544 158286625 + Gm43129 lincRNA lincRNA MGP_LPJ_T0069996.1 MGP_LPJ_G0029196.1 mouse_genomes_project 5 6439441 6665452 + MGP_LPJ_P0069996 9330182L06Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0069997.1 MGP_LPJ_G0029196.1 mouse_genomes_project 5 6439450 6647025 + MGP_LPJ_P0069997 9330182L06Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0069998.1 MGP_LPJ_G0029196.1 mouse_genomes_project 5 6439453 6586727 + 9330182L06Rik protein_coding retained_intron MGP_LPJ_T0069999.1 MGP_LPJ_G0029196.1 mouse_genomes_project 5 6439455 6647409 + MGP_LPJ_P0069999 9330182L06Rik protein_coding protein_coding MGP_LPJ_T0070000.1 MGP_LPJ_G0029196.1 mouse_genomes_project 5 6439455 6666433 + MGP_LPJ_P0070000 9330182L06Rik protein_coding protein_coding MGP_LPJ_T0070001.1 MGP_LPJ_G0029196.1 mouse_genomes_project 5 6439472 6667541 + MGP_LPJ_P0070001 9330182L06Rik protein_coding protein_coding MGP_LPJ_T0070002.1 MGP_LPJ_G0029196.1 mouse_genomes_project 5 6439498 6644913 + MGP_LPJ_P0070002 9330182L06Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0070003.1 MGP_LPJ_G0029196.1 mouse_genomes_project 5 6596732 6602746 + 9330182L06Rik protein_coding retained_intron MGP_LPJ_T0004863.1 MGP_LPJ_G0004185.1 mouse_genomes_project 5 129385847 129386377 + Gm42838 antisense antisense MGP_LPJ_T0074737.1 MGP_LPJ_G0030085.1 mouse_genomes_project 5 140353728 140374991 - MGP_LPJ_P0074737 Pom121 protein_coding protein_coding MGP_LPJ_T0075156.1 MGP_LPJ_G0030167.1 mouse_genomes_project 5 143656482 143660818 - MGP_LPJ_P0075156 BC037034 protein_coding protein_coding MGP_LPJ_T0075157.1 MGP_LPJ_G0030167.1 mouse_genomes_project 5 143656484 143660164 - MGP_LPJ_P0075157 BC037034 protein_coding protein_coding MGP_LPJ_T0075158.1 MGP_LPJ_G0030167.1 mouse_genomes_project 5 143656485 143660814 - MGP_LPJ_P0075158 BC037034 protein_coding nonsense_mediated_decay MGP_LPJ_T0075159.1 MGP_LPJ_G0030167.1 mouse_genomes_project 5 143656486 143660857 - BC037034 protein_coding retained_intron MGP_LPJ_T0075160.1 MGP_LPJ_G0030167.1 mouse_genomes_project 5 143656928 143657769 - MGP_LPJ_P0075160 BC037034 protein_coding protein_coding MGP_LPJ_T0075161.1 MGP_LPJ_G0030167.1 mouse_genomes_project 5 143658393 143659018 - BC037034 protein_coding retained_intron MGP_LPJ_T0075162.1 MGP_LPJ_G0030167.1 mouse_genomes_project 5 143659076 143659962 - BC037034 protein_coding retained_intron MGP_LPJ_T0015156.1 MGP_LPJ_G0013247.1 mouse_genomes_project 5 152231662 152232474 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004656.1 MGP_LPJ_G0004034.1 mouse_genomes_project 5 5877622 5906892 - Gm5106 antisense antisense MGP_LPJ_T0070110.1 MGP_LPJ_G0029217.1 mouse_genomes_project 5 19446960 19616301 - MGP_LPJ_P0070110 Fbxl13 protein_coding protein_coding MGP_LPJ_T0070111.1 MGP_LPJ_G0029217.1 mouse_genomes_project 5 19453313 19616283 - Fbxl13 protein_coding retained_intron MGP_LPJ_T0070112.1 MGP_LPJ_G0029217.1 mouse_genomes_project 5 19485802 19616253 - MGP_LPJ_P0070112 Fbxl13 protein_coding protein_coding MGP_LPJ_T0070115.1 MGP_LPJ_G0029217.1 mouse_genomes_project 5 19614248 19616330 - Fbxl13 protein_coding retained_intron MGP_LPJ_T0014944.1 MGP_LPJ_G0013035.1 mouse_genomes_project 5 59609433 59609845 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001713.1 MGP_LPJ_G0001625.1 mouse_genomes_project 5 73615830 73618292 - TEC TEC MGP_LPJ_T0075763.1 MGP_LPJ_G0030299.1 mouse_genomes_project 5 154353613 154740769 + MGP_LPJ_P0075763 Mtus2 protein_coding protein_coding MGP_LPJ_T0075764.1 MGP_LPJ_G0030299.1 mouse_genomes_project 5 154353635 154484891 + MGP_LPJ_P0075764 Mtus2 protein_coding protein_coding MGP_LPJ_T0075765.1 MGP_LPJ_G0030299.1 mouse_genomes_project 5 154491232 154652551 + Mtus2 protein_coding retained_intron MGP_LPJ_T0075766.1 MGP_LPJ_G0030299.1 mouse_genomes_project 5 154505595 154625143 + Mtus2 protein_coding processed_transcript MGP_LPJ_T0075767.1 MGP_LPJ_G0030299.1 mouse_genomes_project 5 154655733 154658913 + Mtus2 protein_coding retained_intron MGP_LPJ_T0075768.1 MGP_LPJ_G0030299.1 mouse_genomes_project 5 154684553 154738772 + MGP_LPJ_P0075768 Mtus2 protein_coding protein_coding MGP_LPJ_T0075769.1 MGP_LPJ_G0030299.1 mouse_genomes_project 5 154684624 154738435 + MGP_LPJ_P0075769 Mtus2 protein_coding protein_coding MGP_LPJ_T0075770.1 MGP_LPJ_G0030299.1 mouse_genomes_project 5 154684628 154738253 + MGP_LPJ_P0075770 Mtus2 protein_coding nonsense_mediated_decay MGP_LPJ_T0075771.1 MGP_LPJ_G0030299.1 mouse_genomes_project 5 154684681 154738739 + MGP_LPJ_P0075771 Mtus2 protein_coding protein_coding MGP_LPJ_T0075772.1 MGP_LPJ_G0030299.1 mouse_genomes_project 5 154727937 154738161 + MGP_LPJ_P0075772 Mtus2 protein_coding protein_coding MGP_LPJ_T0075773.1 MGP_LPJ_G0030299.1 mouse_genomes_project 5 154727946 154738701 + MGP_LPJ_P0075773 Mtus2 protein_coding protein_coding MGP_LPJ_T0008103.1 MGP_LPJ_G0006610.1 mouse_genomes_project 5 32563984 32571640 + lincRNA lincRNA MGP_LPJ_T0004847.1 MGP_LPJ_G0004176.1 mouse_genomes_project 5 127221206 127229024 - Gm2479 antisense antisense MGP_LPJ_T0004848.1 MGP_LPJ_G0004176.1 mouse_genomes_project 5 127221371 127226822 - Gm2479 antisense antisense MGP_LPJ_T0075256.1 MGP_LPJ_G0030183.1 mouse_genomes_project 5 144919191 144930484 - MGP_LPJ_P0075256 Cox19 protein_coding protein_coding MGP_LPJ_T0075257.1 MGP_LPJ_G0030183.1 mouse_genomes_project 5 144920814 144930428 - Cox19 protein_coding processed_transcript MGP_LPJ_T0075258.1 MGP_LPJ_G0030183.1 mouse_genomes_project 5 144921132 144922568 - Cox19 protein_coding processed_transcript MGP_LPJ_T0075259.1 MGP_LPJ_G0030183.1 mouse_genomes_project 5 144921213 144937091 - MGP_LPJ_P0075259 Cox19 protein_coding protein_coding MGP_LPJ_T0075260.1 MGP_LPJ_G0030183.1 mouse_genomes_project 5 144921302 144930376 - MGP_LPJ_P0075260 Cox19 protein_coding nonsense_mediated_decay MGP_LPJ_T0075261.1 MGP_LPJ_G0030183.1 mouse_genomes_project 5 144926158 144930411 - Cox19 protein_coding retained_intron MGP_LPJ_T0075262.1 MGP_LPJ_G0030183.1 mouse_genomes_project 5 144926327 144930416 - Cox19 protein_coding retained_intron MGP_LPJ_T0015152.1 MGP_LPJ_G0013243.1 mouse_genomes_project 5 151888466 151888743 - processed_pseudogene processed_pseudogene MGP_LPJ_T0070816.1 MGP_LPJ_G0029342.1 mouse_genomes_project 5 31778116 31795729 - Spon2 protein_coding retained_intron MGP_LPJ_T0070817.1 MGP_LPJ_G0029342.1 mouse_genomes_project 5 31793709 31798232 - MGP_LPJ_P0070817 Spon2 protein_coding protein_coding MGP_LPJ_T0070818.1 MGP_LPJ_G0029342.1 mouse_genomes_project 5 31793716 31797962 - Spon2 protein_coding retained_intron MGP_LPJ_T0070819.1 MGP_LPJ_G0029342.1 mouse_genomes_project 5 31793717 31795740 - Spon2 protein_coding retained_intron MGP_LPJ_T0070820.1 MGP_LPJ_G0029342.1 mouse_genomes_project 5 31796205 31797972 - MGP_LPJ_P0070820 Spon2 protein_coding protein_coding MGP_LPJ_T0075748.1 MGP_LPJ_G0030296.1 mouse_genomes_project 5 153926383 154108220 - MGP_LPJ_P0075748 Flt1 protein_coding protein_coding MGP_LPJ_T0075749.1 MGP_LPJ_G0030296.1 mouse_genomes_project 5 153974155 154011313 - Flt1 protein_coding processed_transcript MGP_LPJ_T0075750.1 MGP_LPJ_G0030296.1 mouse_genomes_project 5 153989300 153991019 - Flt1 protein_coding processed_transcript MGP_LPJ_T0075751.1 MGP_LPJ_G0030296.1 mouse_genomes_project 5 154012053 154108197 - MGP_LPJ_P0075751 Flt1 protein_coding protein_coding MGP_LPJ_T0075752.1 MGP_LPJ_G0030296.1 mouse_genomes_project 5 154022576 154024602 - Flt1 protein_coding retained_intron MGP_LPJ_T0075753.1 MGP_LPJ_G0030296.1 mouse_genomes_project 5 154032078 154108197 - Flt1 protein_coding processed_transcript MGP_LPJ_T0071937.1 MGP_LPJ_G0029530.1 mouse_genomes_project 5 74477628 74557168 - MGP_LPJ_P0071937 Usp46 protein_coding protein_coding MGP_LPJ_T0071938.1 MGP_LPJ_G0029530.1 mouse_genomes_project 5 74477899 74557179 - MGP_LPJ_P0071938 Usp46 protein_coding protein_coding MGP_LPJ_T0071939.1 MGP_LPJ_G0029530.1 mouse_genomes_project 5 74480974 74517411 - Usp46 protein_coding processed_transcript MGP_LPJ_T0071940.1 MGP_LPJ_G0029530.1 mouse_genomes_project 5 74506457 74509527 - MGP_LPJ_P0071940 Usp46 protein_coding protein_coding MGP_LPJ_T0071941.1 MGP_LPJ_G0029530.1 mouse_genomes_project 5 74509428 74514296 - Usp46 protein_coding retained_intron MGP_LPJ_T0071942.1 MGP_LPJ_G0029530.1 mouse_genomes_project 5 74509474 74554497 - MGP_LPJ_P0071942 Usp46 protein_coding protein_coding MGP_LPJ_T0075815.1 MGP_LPJ_G0030307.1 mouse_genomes_project 5 155922643 155937055 + Medag protein_coding retained_intron MGP_LPJ_T0075816.1 MGP_LPJ_G0030307.1 mouse_genomes_project 5 155922849 155945911 + MGP_LPJ_P0075816 Medag protein_coding protein_coding MGP_LPJ_T0098424.1 MGP_LPJ_G0036705.1 mouse_genomes_project 5 93579139 93579268 - Gm22728 scaRNA scaRNA MGP_LPJ_T0008135.1 MGP_LPJ_G0006630.1 mouse_genomes_project 5 42906952 42907991 - Gm42555 lincRNA lincRNA MGP_LPJ_T0014894.1 MGP_LPJ_G0012985.1 mouse_genomes_project 5 32680427 32680884 - processed_pseudogene processed_pseudogene MGP_LPJ_T0073774.1 MGP_LPJ_G0029928.1 mouse_genomes_project 5 125397379 125445295 + MGP_LPJ_P0073774 Naa25 protein_coding protein_coding MGP_LPJ_T0073775.1 MGP_LPJ_G0029928.1 mouse_genomes_project 5 125397437 125441701 + MGP_LPJ_P0073775 Naa25 protein_coding nonsense_mediated_decay MGP_LPJ_T0073776.1 MGP_LPJ_G0029928.1 mouse_genomes_project 5 125397438 125429401 + Naa25 protein_coding retained_intron MGP_LPJ_T0073777.1 MGP_LPJ_G0029928.1 mouse_genomes_project 5 125397448 125442812 + MGP_LPJ_P0073777 Naa25 protein_coding nonsense_mediated_decay MGP_LPJ_T0073779.1 MGP_LPJ_G0029928.1 mouse_genomes_project 5 125442298 125447263 + MGP_LPJ_P0073779 Naa25 protein_coding nonsense_mediated_decay MGP_LPJ_T0073780.1 MGP_LPJ_G0029928.1 mouse_genomes_project 5 125442883 125443397 + Naa25 protein_coding processed_transcript MGP_LPJ_T0099570.1 MGP_LPJ_G0037833.1 mouse_genomes_project 5 39365070 39365250 - Gm23022 snRNA snRNA MGP_LPJ_T0001631.1 MGP_LPJ_G0001545.1 mouse_genomes_project 5 57114027 57117391 + TEC TEC MGP_LPJ_T0070368.1 MGP_LPJ_G0029267.1 mouse_genomes_project 5 26163718 26177231 + MGP_LPJ_P0070368 Htr5a protein_coding protein_coding MGP_LPJ_T0014869.1 MGP_LPJ_G0012960.1 mouse_genomes_project 5 25294269 25295938 - processed_pseudogene processed_pseudogene MGP_LPJ_T0070207.1 MGP_LPJ_G0029235.1 mouse_genomes_project 5 22281432 22301382 + MGP_LPJ_P0070207 Nupl2 protein_coding protein_coding MGP_LPJ_T0070208.1 MGP_LPJ_G0029235.1 mouse_genomes_project 5 22281469 22300203 + MGP_LPJ_P0070208 Nupl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0070209.1 MGP_LPJ_G0029235.1 mouse_genomes_project 5 22283976 22286346 + Nupl2 protein_coding retained_intron MGP_LPJ_T0070210.1 MGP_LPJ_G0029235.1 mouse_genomes_project 5 22295492 22298798 + Nupl2 protein_coding retained_intron MGP_LPJ_T0073024.1 MGP_LPJ_G0029781.1 mouse_genomes_project 5 113136383 113137102 + MGP_LPJ_P0073024 Chfr protein_coding protein_coding MGP_LPJ_T0073025.1 MGP_LPJ_G0029781.1 mouse_genomes_project 5 113136390 113177457 + MGP_LPJ_P0073025 Chfr protein_coding protein_coding MGP_LPJ_T0073026.1 MGP_LPJ_G0029781.1 mouse_genomes_project 5 113136390 113169354 + MGP_LPJ_P0073026 Chfr protein_coding nonsense_mediated_decay MGP_LPJ_T0073027.1 MGP_LPJ_G0029781.1 mouse_genomes_project 5 113136392 113177006 + MGP_LPJ_P0073027 Chfr protein_coding nonsense_mediated_decay MGP_LPJ_T0073028.1 MGP_LPJ_G0029781.1 mouse_genomes_project 5 113136398 113177145 + MGP_LPJ_P0073028 Chfr protein_coding protein_coding MGP_LPJ_T0073029.1 MGP_LPJ_G0029781.1 mouse_genomes_project 5 113136401 113173890 + Chfr protein_coding retained_intron MGP_LPJ_T0073030.1 MGP_LPJ_G0029781.1 mouse_genomes_project 5 113136401 113177458 + MGP_LPJ_P0073030 Chfr protein_coding protein_coding MGP_LPJ_T0073031.1 MGP_LPJ_G0029781.1 mouse_genomes_project 5 113136419 113177455 + MGP_LPJ_P0073031 Chfr protein_coding nonsense_mediated_decay MGP_LPJ_T0073032.1 MGP_LPJ_G0029781.1 mouse_genomes_project 5 113136448 113148751 + MGP_LPJ_P0073032 Chfr protein_coding nonsense_mediated_decay MGP_LPJ_T0073033.1 MGP_LPJ_G0029781.1 mouse_genomes_project 5 113136466 113145861 + MGP_LPJ_P0073033 Chfr protein_coding protein_coding MGP_LPJ_T0073034.1 MGP_LPJ_G0029781.1 mouse_genomes_project 5 113160442 113168501 + Chfr protein_coding retained_intron MGP_LPJ_T0073035.1 MGP_LPJ_G0029781.1 mouse_genomes_project 5 113169352 113176491 + Chfr protein_coding retained_intron MGP_LPJ_T0008340.1 MGP_LPJ_G0006779.1 mouse_genomes_project 5 120165597 120376951 - Gm43122 lincRNA lincRNA MGP_LPJ_T0008342.1 MGP_LPJ_G0006779.1 mouse_genomes_project 5 120364672 120376985 - Gm43122 lincRNA lincRNA MGP_LPJ_T0070071.1 MGP_LPJ_G0029209.1 mouse_genomes_project 5 18694936 18814791 - MGP_LPJ_P0070071 Phtf2 protein_coding protein_coding MGP_LPJ_T0070072.1 MGP_LPJ_G0029209.1 mouse_genomes_project 5 18695946 18711566 - MGP_LPJ_P0070072 Phtf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0070073.1 MGP_LPJ_G0029209.1 mouse_genomes_project 5 18719978 18787646 - Phtf2 protein_coding processed_transcript MGP_LPJ_T0070074.1 MGP_LPJ_G0029209.1 mouse_genomes_project 5 18719981 18743117 - MGP_LPJ_P0070074 Phtf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0070075.1 MGP_LPJ_G0029209.1 mouse_genomes_project 5 18726109 18814744 - Phtf2 protein_coding retained_intron MGP_LPJ_T0070076.1 MGP_LPJ_G0029209.1 mouse_genomes_project 5 18730674 18814745 - Phtf2 protein_coding retained_intron MGP_LPJ_T0070077.1 MGP_LPJ_G0029209.1 mouse_genomes_project 5 18743093 18814712 - MGP_LPJ_P0070077 Phtf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0001933.1 MGP_LPJ_G0001843.1 mouse_genomes_project 5 155910416 155912054 + TEC TEC MGP_LPJ_T0014897.1 MGP_LPJ_G0012988.1 mouse_genomes_project 5 33138898 33139507 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014857.1 MGP_LPJ_G0012948.1 mouse_genomes_project 5 23575183 23575461 + processed_pseudogene processed_pseudogene MGP_LPJ_T0075823.1 MGP_LPJ_G0030309.1 mouse_genomes_project 5 156061781 156154931 + MGP_LPJ_P0075823 Wdr95 protein_coding protein_coding MGP_LPJ_T0075824.1 MGP_LPJ_G0030309.1 mouse_genomes_project 5 156062790 156101688 + Wdr95 protein_coding retained_intron MGP_LPJ_T0075825.1 MGP_LPJ_G0030309.1 mouse_genomes_project 5 156062796 156143331 + MGP_LPJ_P0075825 Wdr95 protein_coding nonsense_mediated_decay MGP_LPJ_T0075826.1 MGP_LPJ_G0030309.1 mouse_genomes_project 5 156062838 156102757 + Wdr95 protein_coding retained_intron MGP_LPJ_T0075827.1 MGP_LPJ_G0030309.1 mouse_genomes_project 5 156062838 156154931 + MGP_LPJ_P0075827 Wdr95 protein_coding protein_coding MGP_LPJ_T0075828.1 MGP_LPJ_G0030309.1 mouse_genomes_project 5 156070088 156101688 + Wdr95 protein_coding retained_intron MGP_LPJ_T0075829.1 MGP_LPJ_G0030309.1 mouse_genomes_project 5 156121748 156128169 + Wdr95 protein_coding retained_intron MGP_LPJ_T0015073.1 MGP_LPJ_G0013164.1 mouse_genomes_project 5 112281188 112281772 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008443.1 MGP_LPJ_G0006848.1 mouse_genomes_project 5 149195698 149198135 + BC030343 lincRNA lincRNA MGP_LPJ_T0075759.1 MGP_LPJ_G0030298.1 mouse_genomes_project 5 154266570 154283843 - MGP_LPJ_P0075759 Slc46a3 protein_coding protein_coding MGP_LPJ_T0075760.1 MGP_LPJ_G0030298.1 mouse_genomes_project 5 154266574 154283843 - MGP_LPJ_P0075760 Slc46a3 protein_coding protein_coding MGP_LPJ_T0075761.1 MGP_LPJ_G0030298.1 mouse_genomes_project 5 154266692 154268003 - Slc46a3 protein_coding retained_intron MGP_LPJ_T0075762.1 MGP_LPJ_G0030298.1 mouse_genomes_project 5 154282908 154283843 - MGP_LPJ_P0075762 Slc46a3 protein_coding protein_coding MGP_LPJ_T0004662.1 MGP_LPJ_G0004039.1 mouse_genomes_project 5 17074096 17099263 - 4921504A21Rik antisense antisense MGP_LPJ_T0004663.1 MGP_LPJ_G0004039.1 mouse_genomes_project 5 17075019 17098876 - 4921504A21Rik antisense antisense MGP_LPJ_T0072322.1 MGP_LPJ_G0029620.1 mouse_genomes_project 5 91681655 91822137 - MGP_LPJ_P0072322 Ankrd17 protein_coding protein_coding MGP_LPJ_T0072323.1 MGP_LPJ_G0029620.1 mouse_genomes_project 5 91682308 91686953 - Ankrd17 protein_coding retained_intron MGP_LPJ_T0072324.1 MGP_LPJ_G0029620.1 mouse_genomes_project 5 91682786 91822124 - MGP_LPJ_P0072324 Ankrd17 protein_coding protein_coding MGP_LPJ_T0072325.1 MGP_LPJ_G0029620.1 mouse_genomes_project 5 91682954 91821783 - MGP_LPJ_P0072325 Ankrd17 protein_coding protein_coding MGP_LPJ_T0072326.1 MGP_LPJ_G0029620.1 mouse_genomes_project 5 91683230 91795277 - MGP_LPJ_P0072326 Ankrd17 protein_coding protein_coding MGP_LPJ_T0072327.1 MGP_LPJ_G0029620.1 mouse_genomes_project 5 91690910 91694185 - Ankrd17 protein_coding retained_intron MGP_LPJ_T0072328.1 MGP_LPJ_G0029620.1 mouse_genomes_project 5 91707933 91758888 - Ankrd17 protein_coding retained_intron MGP_LPJ_T0072329.1 MGP_LPJ_G0029620.1 mouse_genomes_project 5 91708577 91717603 - Ankrd17 protein_coding retained_intron MGP_LPJ_T0072330.1 MGP_LPJ_G0029620.1 mouse_genomes_project 5 91714363 91720814 - Ankrd17 protein_coding retained_intron MGP_LPJ_T0072331.1 MGP_LPJ_G0029620.1 mouse_genomes_project 5 91721348 91729634 - Ankrd17 protein_coding retained_intron MGP_LPJ_T0072332.1 MGP_LPJ_G0029620.1 mouse_genomes_project 5 91730493 91732670 - Ankrd17 protein_coding retained_intron MGP_LPJ_T0072333.1 MGP_LPJ_G0029620.1 mouse_genomes_project 5 91746138 91748979 - Ankrd17 protein_coding retained_intron MGP_LPJ_T0072334.1 MGP_LPJ_G0029620.1 mouse_genomes_project 5 91819590 91821740 - Ankrd17 protein_coding retained_intron MGP_LPJ_T0010682.1 MGP_LPJ_G0008800.1 mouse_genomes_project 5 551242 551310 + Gm22926 miRNA miRNA MGP_LPJ_T0001601.1 MGP_LPJ_G0001515.1 mouse_genomes_project 5 48363945 48367405 + TEC TEC MGP_LPJ_T0015144.1 MGP_LPJ_G0013235.1 mouse_genomes_project 5 150689075 150689246 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001493.1 MGP_LPJ_G0001410.1 mouse_genomes_project 5 13538840 13540019 + TEC TEC MGP_LPJ_T0072251.1 MGP_LPJ_G0029594.1 mouse_genomes_project 5 89199994 89220188 + MGP_LPJ_P0072251 Prr27 protein_coding protein_coding MGP_LPJ_T0072252.1 MGP_LPJ_G0029594.1 mouse_genomes_project 5 89199994 89220188 + MGP_LPJ_P0072252 Prr27 protein_coding protein_coding MGP_LPJ_T0001682.1 MGP_LPJ_G0001595.1 mouse_genomes_project 5 66755054 66756993 - TEC TEC MGP_LPJ_T0071787.1 MGP_LPJ_G0029501.1 mouse_genomes_project 5 69415595 69652695 - MGP_LPJ_P0071787 Kctd8 protein_coding protein_coding MGP_LPJ_T0071788.1 MGP_LPJ_G0029501.1 mouse_genomes_project 5 69606605 69652693 - MGP_LPJ_P0071788 Kctd8 protein_coding protein_coding MGP_LPJ_T0071056.1 MGP_LPJ_G0029376.1 mouse_genomes_project 5 33773553 33788654 - MGP_LPJ_P0071056 Lrpap1 protein_coding protein_coding MGP_LPJ_T0071057.1 MGP_LPJ_G0029376.1 mouse_genomes_project 5 33775121 33785402 - MGP_LPJ_P0071057 Lrpap1 protein_coding protein_coding MGP_LPJ_T0071058.1 MGP_LPJ_G0029376.1 mouse_genomes_project 5 33775347 33788577 - Lrpap1 protein_coding retained_intron MGP_LPJ_T0071059.1 MGP_LPJ_G0029376.1 mouse_genomes_project 5 33785015 33788584 - Lrpap1 protein_coding retained_intron MGP_LPJ_T0071060.1 MGP_LPJ_G0029376.1 mouse_genomes_project 5 33785396 33787428 - Lrpap1 protein_coding processed_transcript MGP_LPJ_T0008358.1 MGP_LPJ_G0006794.1 mouse_genomes_project 5 123612957 123617145 - Gm43050 lincRNA lincRNA MGP_LPJ_T0008359.1 MGP_LPJ_G0006794.1 mouse_genomes_project 5 123616254 123617016 - Gm43050 lincRNA lincRNA MGP_LPJ_T0001887.1 MGP_LPJ_G0001798.1 mouse_genomes_project 5 136777535 136781372 - TEC TEC MGP_LPJ_T0008309.1 MGP_LPJ_G0006760.1 mouse_genomes_project 5 115350455 115368988 - Miat lincRNA lincRNA MGP_LPJ_T0008310.1 MGP_LPJ_G0006760.1 mouse_genomes_project 5 115350457 115368541 - Miat lincRNA lincRNA MGP_LPJ_T0008312.1 MGP_LPJ_G0006760.1 mouse_genomes_project 5 115358606 115368237 - Miat lincRNA lincRNA MGP_LPJ_T0008313.1 MGP_LPJ_G0006760.1 mouse_genomes_project 5 115358897 115368522 - Miat lincRNA lincRNA MGP_LPJ_T0008314.1 MGP_LPJ_G0006760.1 mouse_genomes_project 5 115359095 115368268 - Miat lincRNA lincRNA MGP_LPJ_T0008315.1 MGP_LPJ_G0006760.1 mouse_genomes_project 5 115367698 115368234 - Miat lincRNA lincRNA MGP_LPJ_T0001622.1 MGP_LPJ_G0001536.1 mouse_genomes_project 5 51562062 51565038 - TEC TEC MGP_LPJ_T0008376.1 MGP_LPJ_G0006803.1 mouse_genomes_project 5 127412415 127414577 - Gm43409 lincRNA lincRNA MGP_LPJ_T0074946.1 MGP_LPJ_G0030125.1 mouse_genomes_project 5 142490359 142491396 + MGP_LPJ_P0074946 Ufsp1 protein_coding protein_coding MGP_LPJ_T0018119.1 MGP_LPJ_G0015524.1 mouse_genomes_project 5 109104589 109243866 - Gm28039 processed_transcript processed_transcript MGP_LPJ_T0075513.1 MGP_LPJ_G0030241.1 mouse_genomes_project 5 149794311 149798483 - MGP_LPJ_P0075513 Ankrd61 protein_coding protein_coding MGP_LPJ_T0075514.1 MGP_LPJ_G0030241.1 mouse_genomes_project 5 149794311 149798520 - MGP_LPJ_P0075514 Ankrd61 protein_coding protein_coding MGP_LPJ_T0075515.1 MGP_LPJ_G0030241.1 mouse_genomes_project 5 149794313 149801668 - MGP_LPJ_P0075515 Ankrd61 protein_coding protein_coding MGP_LPJ_T0001769.1 MGP_LPJ_G0001681.1 mouse_genomes_project 5 106710677 106711929 + TEC TEC MGP_LPJ_T0069875.1 MGP_LPJ_G0029178.1 mouse_genomes_project 5 2577211 2667738 - MGP_LPJ_P0069875 Cfap69 protein_coding protein_coding MGP_LPJ_T0069876.1 MGP_LPJ_G0029178.1 mouse_genomes_project 5 2577215 2667707 - MGP_LPJ_P0069876 Cfap69 protein_coding protein_coding MGP_LPJ_T0069877.1 MGP_LPJ_G0029178.1 mouse_genomes_project 5 2578924 2627958 - Cfap69 protein_coding processed_transcript MGP_LPJ_T0069878.1 MGP_LPJ_G0029178.1 mouse_genomes_project 5 2578980 2580444 - MGP_LPJ_P0069878 Cfap69 protein_coding protein_coding MGP_LPJ_T0069879.1 MGP_LPJ_G0029178.1 mouse_genomes_project 5 2579070 2585144 - MGP_LPJ_P0069879 Cfap69 protein_coding protein_coding MGP_LPJ_T0069880.1 MGP_LPJ_G0029178.1 mouse_genomes_project 5 2579113 2623116 - MGP_LPJ_P0069880 Cfap69 protein_coding protein_coding MGP_LPJ_T0069881.1 MGP_LPJ_G0029178.1 mouse_genomes_project 5 2584288 2667542 - MGP_LPJ_P0069881 Cfap69 protein_coding nonsense_mediated_decay MGP_LPJ_T0069882.1 MGP_LPJ_G0029178.1 mouse_genomes_project 5 2587107 2667707 - MGP_LPJ_P0069882 Cfap69 protein_coding protein_coding MGP_LPJ_T0069883.1 MGP_LPJ_G0029178.1 mouse_genomes_project 5 2591582 2667731 - MGP_LPJ_P0069883 Cfap69 protein_coding protein_coding MGP_LPJ_T0069884.1 MGP_LPJ_G0029178.1 mouse_genomes_project 5 2631481 2631855 - Cfap69 protein_coding retained_intron MGP_LPJ_T0069885.1 MGP_LPJ_G0029178.1 mouse_genomes_project 5 2646778 2667726 - Cfap69 protein_coding retained_intron MGP_LPJ_T0069886.1 MGP_LPJ_G0029178.1 mouse_genomes_project 5 2650293 2666785 - MGP_LPJ_P0069886 Cfap69 protein_coding protein_coding MGP_LPJ_T0004799.1 MGP_LPJ_G0004142.1 mouse_genomes_project 5 114462034 114462809 - Gm43118 antisense antisense MGP_LPJ_T0001924.1 MGP_LPJ_G0001834.1 mouse_genomes_project 5 149326974 149329716 + TEC TEC MGP_LPJ_T0001919.1 MGP_LPJ_G0001829.1 mouse_genomes_project 5 145995359 145997569 - TEC TEC MGP_LPJ_T0010749.1 MGP_LPJ_G0008867.1 mouse_genomes_project 5 142755128 142755243 - Mir6418 miRNA miRNA MGP_LPJ_T0008084.1 MGP_LPJ_G0006598.1 mouse_genomes_project 5 24699132 24737197 - 4930584F24Rik lincRNA lincRNA MGP_LPJ_T0008085.1 MGP_LPJ_G0006598.1 mouse_genomes_project 5 24699134 24737222 - 4930584F24Rik lincRNA lincRNA MGP_LPJ_T0008086.1 MGP_LPJ_G0006598.1 mouse_genomes_project 5 24699136 24737186 - 4930584F24Rik lincRNA lincRNA MGP_LPJ_T0008087.1 MGP_LPJ_G0006598.1 mouse_genomes_project 5 24718833 24737197 - 4930584F24Rik lincRNA lincRNA MGP_LPJ_T0014933.1 MGP_LPJ_G0013024.1 mouse_genomes_project 5 55189876 55190183 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008116.1 MGP_LPJ_G0006617.1 mouse_genomes_project 5 36741966 36746112 + Gm20052 lincRNA lincRNA MGP_LPJ_T0008117.1 MGP_LPJ_G0006617.1 mouse_genomes_project 5 36742133 36743168 + Gm20052 lincRNA lincRNA MGP_LPJ_T0008118.1 MGP_LPJ_G0006617.1 mouse_genomes_project 5 36742544 36744994 + Gm20052 lincRNA lincRNA MGP_LPJ_T0008119.1 MGP_LPJ_G0006617.1 mouse_genomes_project 5 36742890 36745471 + Gm20052 lincRNA lincRNA MGP_LPJ_T0008120.1 MGP_LPJ_G0006617.1 mouse_genomes_project 5 36742901 36745332 + Gm20052 lincRNA lincRNA MGP_LPJ_T0001653.1 MGP_LPJ_G0001566.1 mouse_genomes_project 5 64519914 64520868 + TEC TEC MGP_LPJ_T0015076.1 MGP_LPJ_G0013167.1 mouse_genomes_project 5 113339643 113339962 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015103.1 MGP_LPJ_G0013194.1 mouse_genomes_project 5 127281382 127282400 + processed_pseudogene processed_pseudogene MGP_LPJ_T0073819.1 MGP_LPJ_G0029937.1 mouse_genomes_project 5 125658056 125731664 - MGP_LPJ_P0073819 Acad10 protein_coding protein_coding MGP_LPJ_T0073820.1 MGP_LPJ_G0029937.1 mouse_genomes_project 5 125658058 125731699 - MGP_LPJ_P0073820 Acad10 protein_coding protein_coding MGP_LPJ_T0073821.1 MGP_LPJ_G0029937.1 mouse_genomes_project 5 125658059 125705406 - Acad10 protein_coding retained_intron MGP_LPJ_T0011617.1 MGP_LPJ_G0009735.1 mouse_genomes_project 5 112464295 112464380 + Gm28000 misc_RNA misc_RNA MGP_LPJ_T0075310.1 MGP_LPJ_G0030196.1 mouse_genomes_project 5 145459165 145464441 - MGP_LPJ_P0075310 Psmg3 protein_coding protein_coding MGP_LPJ_T0075311.1 MGP_LPJ_G0030196.1 mouse_genomes_project 5 145459186 145464399 - MGP_LPJ_P0075311 Psmg3 protein_coding protein_coding MGP_LPJ_T0075312.1 MGP_LPJ_G0030196.1 mouse_genomes_project 5 145462030 145464431 - Psmg3 protein_coding retained_intron MGP_LPJ_T0072008.1 MGP_LPJ_G0029542.1 mouse_genomes_project 5 76801218 76814245 + Tmem165 protein_coding processed_transcript MGP_LPJ_T0072009.1 MGP_LPJ_G0029542.1 mouse_genomes_project 5 76801285 76825931 + MGP_LPJ_P0072009 Tmem165 protein_coding protein_coding MGP_LPJ_T0072010.1 MGP_LPJ_G0029542.1 mouse_genomes_project 5 76816702 76822413 + Tmem165 protein_coding retained_intron MGP_LPJ_T0072011.1 MGP_LPJ_G0029542.1 mouse_genomes_project 5 76821377 76823374 + Tmem165 protein_coding processed_transcript MGP_LPJ_T0001499.1 MGP_LPJ_G0001416.1 mouse_genomes_project 5 18980596 18981929 + TEC TEC MGP_LPJ_T0001637.1 MGP_LPJ_G0001551.1 mouse_genomes_project 5 57593634 57596349 + TEC TEC MGP_LPJ_T0014915.1 MGP_LPJ_G0013006.1 mouse_genomes_project 5 43521286 43521923 - processed_pseudogene processed_pseudogene MGP_LPJ_T0071823.1 MGP_LPJ_G0029509.1 mouse_genomes_project 5 72021775 72492842 + MGP_LPJ_P0071823 Gabrb1 protein_coding protein_coding MGP_LPJ_T0071824.1 MGP_LPJ_G0029509.1 mouse_genomes_project 5 72064312 72537837 + MGP_LPJ_P0071824 Gabrb1 protein_coding protein_coding MGP_LPJ_T0099574.1 MGP_LPJ_G0037837.1 mouse_genomes_project 5 54898783 54898945 - Gm25513 snRNA snRNA MGP_LPJ_T0011608.1 MGP_LPJ_G0009726.1 mouse_genomes_project 5 66545645 66545968 - Gm23183 misc_RNA misc_RNA MGP_LPJ_T0072624.1 MGP_LPJ_G0029688.1 mouse_genomes_project 5 102619057 102652902 + MGP_LPJ_P0072624 Cops4 protein_coding protein_coding MGP_LPJ_T0072625.1 MGP_LPJ_G0029688.1 mouse_genomes_project 5 102619191 102636236 + Cops4 protein_coding retained_intron MGP_LPJ_T0072626.1 MGP_LPJ_G0029688.1 mouse_genomes_project 5 102619205 102641593 + MGP_LPJ_P0072626 Cops4 protein_coding protein_coding MGP_LPJ_T0072627.1 MGP_LPJ_G0029688.1 mouse_genomes_project 5 102619220 102637532 + MGP_LPJ_P0072627 Cops4 protein_coding nonsense_mediated_decay MGP_LPJ_T0072628.1 MGP_LPJ_G0029688.1 mouse_genomes_project 5 102619485 102641479 + MGP_LPJ_P0072628 Cops4 protein_coding protein_coding MGP_LPJ_T0072629.1 MGP_LPJ_G0029688.1 mouse_genomes_project 5 102632780 102649052 + MGP_LPJ_P0072629 Cops4 protein_coding nonsense_mediated_decay MGP_LPJ_T0072630.1 MGP_LPJ_G0029688.1 mouse_genomes_project 5 102636382 102652879 + Cops4 protein_coding retained_intron MGP_LPJ_T0073878.1 MGP_LPJ_G0029944.1 mouse_genomes_project 5 126254447 126287417 - MGP_LPJ_P0073878 Ccdc63 protein_coding protein_coding MGP_LPJ_T0073879.1 MGP_LPJ_G0029944.1 mouse_genomes_project 5 126254477 126258214 - Ccdc63 protein_coding retained_intron MGP_LPJ_T0073880.1 MGP_LPJ_G0029944.1 mouse_genomes_project 5 126254492 126284177 - MGP_LPJ_P0073880 Ccdc63 protein_coding nonsense_mediated_decay MGP_LPJ_T0073881.1 MGP_LPJ_G0029944.1 mouse_genomes_project 5 126273020 126281409 - MGP_LPJ_P0073881 Ccdc63 protein_coding protein_coding MGP_LPJ_T0073882.1 MGP_LPJ_G0029944.1 mouse_genomes_project 5 126279303 126281409 - MGP_LPJ_P0073882 Ccdc63 protein_coding protein_coding MGP_LPJ_T0073883.1 MGP_LPJ_G0029944.1 mouse_genomes_project 5 126283814 126288312 - Ccdc63 protein_coding retained_intron MGP_LPJ_T0073884.1 MGP_LPJ_G0029944.1 mouse_genomes_project 5 126285473 126290173 - Ccdc63 protein_coding retained_intron MGP_LPJ_T0008136.1 MGP_LPJ_G0006631.1 mouse_genomes_project 5 43529848 43544953 - Gm42985 lincRNA lincRNA MGP_LPJ_T0001712.1 MGP_LPJ_G0001624.1 mouse_genomes_project 5 73455526 73458902 - TEC TEC MGP_LPJ_T0071461.1 MGP_LPJ_G0029447.1 mouse_genomes_project 5 52090195 52119374 - MGP_LPJ_P0071461 Sepsecs protein_coding protein_coding MGP_LPJ_T0071462.1 MGP_LPJ_G0029447.1 mouse_genomes_project 5 52090195 52119374 - MGP_LPJ_P0071462 Sepsecs protein_coding nonsense_mediated_decay MGP_LPJ_T0071463.1 MGP_LPJ_G0029447.1 mouse_genomes_project 5 52091284 52115708 - MGP_LPJ_P0071463 Sepsecs protein_coding nonsense_mediated_decay MGP_LPJ_T0071464.1 MGP_LPJ_G0029447.1 mouse_genomes_project 5 52096748 52098589 - Sepsecs protein_coding retained_intron MGP_LPJ_T0071465.1 MGP_LPJ_G0029447.1 mouse_genomes_project 5 52106050 52119281 - MGP_LPJ_P0071465 Sepsecs protein_coding nonsense_mediated_decay MGP_LPJ_T0073004.1 MGP_LPJ_G0029778.1 mouse_genomes_project 5 113092955 113097117 + MGP_LPJ_P0073004 Plcxd1 protein_coding protein_coding MGP_LPJ_T0073005.1 MGP_LPJ_G0029778.1 mouse_genomes_project 5 113093408 113095181 + MGP_LPJ_P0073005 Plcxd1 protein_coding protein_coding MGP_LPJ_T0073006.1 MGP_LPJ_G0029778.1 mouse_genomes_project 5 113093483 113096935 + MGP_LPJ_P0073006 Plcxd1 protein_coding unknown_likely_coding MGP_LPJ_T0073007.1 MGP_LPJ_G0029778.1 mouse_genomes_project 5 113093545 113099250 + MGP_LPJ_P0073007 Plcxd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0073008.1 MGP_LPJ_G0029778.1 mouse_genomes_project 5 113094505 113099255 + Plcxd1 protein_coding processed_transcript MGP_LPJ_T0074543.1 MGP_LPJ_G0030055.1 mouse_genomes_project 5 138998743 139028976 - MGP_LPJ_P0074543 Wbscr16 protein_coding protein_coding MGP_LPJ_T0074544.1 MGP_LPJ_G0030055.1 mouse_genomes_project 5 139007096 139020595 - Wbscr16 protein_coding retained_intron MGP_LPJ_T0074545.1 MGP_LPJ_G0030055.1 mouse_genomes_project 5 139016130 139019524 - Wbscr16 protein_coding retained_intron MGP_LPJ_T0075774.1 MGP_LPJ_G0030300.1 mouse_genomes_project 5 154745500 154828707 - MGP_LPJ_P0075774 Slc7a1 protein_coding protein_coding MGP_LPJ_T0075775.1 MGP_LPJ_G0030300.1 mouse_genomes_project 5 154753514 154821706 - MGP_LPJ_P0075775 Slc7a1 protein_coding protein_coding MGP_LPJ_T0075776.1 MGP_LPJ_G0030300.1 mouse_genomes_project 5 154760662 154762813 - Slc7a1 protein_coding retained_intron MGP_LPJ_T0075777.1 MGP_LPJ_G0030300.1 mouse_genomes_project 5 154762164 154828594 - MGP_LPJ_P0075777 Slc7a1 protein_coding protein_coding MGP_LPJ_T0075778.1 MGP_LPJ_G0030300.1 mouse_genomes_project 5 154780590 154799796 - MGP_LPJ_P0075778 Slc7a1 protein_coding protein_coding MGP_LPJ_T0075779.1 MGP_LPJ_G0030300.1 mouse_genomes_project 5 154820307 154822540 - Slc7a1 protein_coding retained_intron MGP_LPJ_T0004722.1 MGP_LPJ_G0004086.1 mouse_genomes_project 5 53071160 53072123 - Gm42747 antisense antisense MGP_LPJ_T0074287.1 MGP_LPJ_G0030006.1 mouse_genomes_project 5 129031611 129148047 + MGP_LPJ_P0074287 Dnah10 protein_coding protein_coding MGP_LPJ_T0074288.1 MGP_LPJ_G0030006.1 mouse_genomes_project 5 129031611 129148052 + MGP_LPJ_P0074288 Dnah10 protein_coding protein_coding MGP_LPJ_T0074289.1 MGP_LPJ_G0030006.1 mouse_genomes_project 5 129099825 129100256 + Dnah10 protein_coding processed_transcript MGP_LPJ_T0074290.1 MGP_LPJ_G0030006.1 mouse_genomes_project 5 129104654 129109156 + Dnah10 protein_coding processed_transcript MGP_LPJ_T0074291.1 MGP_LPJ_G0030006.1 mouse_genomes_project 5 129114284 129117508 + Dnah10 protein_coding retained_intron MGP_LPJ_T0074292.1 MGP_LPJ_G0030006.1 mouse_genomes_project 5 129118159 129147869 + Dnah10 protein_coding retained_intron MGP_LPJ_T0015040.1 MGP_LPJ_G0013131.1 mouse_genomes_project 5 104347071 104347835 + processed_pseudogene processed_pseudogene MGP_LPJ_T0071443.1 MGP_LPJ_G0029442.1 mouse_genomes_project 5 50852409 50955754 - MGP_LPJ_P0071443 Ppargc1a protein_coding protein_coding MGP_LPJ_T0071444.1 MGP_LPJ_G0029442.1 mouse_genomes_project 5 50855803 50955703 - MGP_LPJ_P0071444 Ppargc1a protein_coding nonsense_mediated_decay MGP_LPJ_T0071445.1 MGP_LPJ_G0029442.1 mouse_genomes_project 5 50855805 50955723 - MGP_LPJ_P0071445 Ppargc1a protein_coding protein_coding MGP_LPJ_T0071446.1 MGP_LPJ_G0029442.1 mouse_genomes_project 5 50856336 50969763 - MGP_LPJ_P0071446 Ppargc1a protein_coding nonsense_mediated_decay MGP_LPJ_T0071447.1 MGP_LPJ_G0029442.1 mouse_genomes_project 5 50894867 50969785 - MGP_LPJ_P0071447 Ppargc1a protein_coding protein_coding MGP_LPJ_T0010757.1 MGP_LPJ_G0008875.1 mouse_genomes_project 5 146772664 146772745 + Gm44385 miRNA miRNA MGP_LPJ_T0010712.1 MGP_LPJ_G0008830.1 mouse_genomes_project 5 83852489 83852635 - Mir1187 miRNA miRNA MGP_LPJ_T0072602.1 MGP_LPJ_G0029686.1 mouse_genomes_project 5 102457984 102475243 - Sec31a protein_coding retained_intron MGP_LPJ_T0072603.1 MGP_LPJ_G0029686.1 mouse_genomes_project 5 102457984 102512506 - MGP_LPJ_P0072603 Sec31a protein_coding protein_coding MGP_LPJ_T0072604.1 MGP_LPJ_G0029686.1 mouse_genomes_project 5 102457985 102469814 - MGP_LPJ_P0072604 Sec31a protein_coding protein_coding MGP_LPJ_T0072605.1 MGP_LPJ_G0029686.1 mouse_genomes_project 5 102457989 102512447 - MGP_LPJ_P0072605 Sec31a protein_coding protein_coding MGP_LPJ_T0072606.1 MGP_LPJ_G0029686.1 mouse_genomes_project 5 102458343 102492237 - MGP_LPJ_P0072606 Sec31a protein_coding protein_coding MGP_LPJ_T0072607.1 MGP_LPJ_G0029686.1 mouse_genomes_project 5 102458481 102460606 - Sec31a protein_coding retained_intron MGP_LPJ_T0072608.1 MGP_LPJ_G0029686.1 mouse_genomes_project 5 102458546 102479177 - MGP_LPJ_P0072608 Sec31a protein_coding protein_coding MGP_LPJ_T0072609.1 MGP_LPJ_G0029686.1 mouse_genomes_project 5 102462089 102475329 - MGP_LPJ_P0072609 Sec31a protein_coding protein_coding MGP_LPJ_T0072610.1 MGP_LPJ_G0029686.1 mouse_genomes_project 5 102479208 102488944 - MGP_LPJ_P0072610 Sec31a protein_coding protein_coding MGP_LPJ_T0072611.1 MGP_LPJ_G0029686.1 mouse_genomes_project 5 102497768 102501897 - Sec31a protein_coding processed_transcript MGP_LPJ_T0072612.1 MGP_LPJ_G0029686.1 mouse_genomes_project 5 102504002 102505933 - Sec31a protein_coding retained_intron MGP_LPJ_T0072613.1 MGP_LPJ_G0029686.1 mouse_genomes_project 5 102511682 102512438 - Sec31a protein_coding retained_intron MGP_LPJ_T0071913.1 MGP_LPJ_G0029524.1 mouse_genomes_project 5 73752529 73769177 - MGP_LPJ_P0071913 Ociad2 protein_coding protein_coding MGP_LPJ_T0071914.1 MGP_LPJ_G0029524.1 mouse_genomes_project 5 73752531 73769263 - MGP_LPJ_P0071914 Ociad2 protein_coding protein_coding MGP_LPJ_T0071915.1 MGP_LPJ_G0029524.1 mouse_genomes_project 5 73752531 73769260 - MGP_LPJ_P0071915 Ociad2 protein_coding protein_coding MGP_LPJ_T0071916.1 MGP_LPJ_G0029524.1 mouse_genomes_project 5 73757978 73771341 - MGP_LPJ_P0071916 Ociad2 protein_coding protein_coding MGP_LPJ_T0001524.1 MGP_LPJ_G0001439.1 mouse_genomes_project 5 30189017 30189249 + TEC TEC MGP_LPJ_T0001883.1 MGP_LPJ_G0001794.1 mouse_genomes_project 5 136668752 136671724 - TEC TEC MGP_LPJ_T0073063.1 MGP_LPJ_G0029787.1 mouse_genomes_project 5 113352617 113355761 - MGP_LPJ_P0073063 P2rx2 protein_coding protein_coding MGP_LPJ_T0073064.1 MGP_LPJ_G0029787.1 mouse_genomes_project 5 113352617 113356018 - MGP_LPJ_P0073064 P2rx2 protein_coding protein_coding MGP_LPJ_T0073065.1 MGP_LPJ_G0029787.1 mouse_genomes_project 5 113352617 113355761 - MGP_LPJ_P0073065 P2rx2 protein_coding protein_coding MGP_LPJ_T0073066.1 MGP_LPJ_G0029787.1 mouse_genomes_project 5 113352618 113355782 - MGP_LPJ_P0073066 P2rx2 protein_coding protein_coding MGP_LPJ_T0073067.1 MGP_LPJ_G0029787.1 mouse_genomes_project 5 113352775 113355955 - P2rx2 protein_coding retained_intron MGP_LPJ_T0073068.1 MGP_LPJ_G0029787.1 mouse_genomes_project 5 113352775 113355955 - MGP_LPJ_P0073068 P2rx2 protein_coding protein_coding MGP_LPJ_T0073816.1 MGP_LPJ_G0029936.1 mouse_genomes_project 5 125615403 125630788 - MGP_LPJ_P0073816 protein_coding protein_coding MGP_LPJ_T0073817.1 MGP_LPJ_G0029936.1 mouse_genomes_project 5 125627731 125655595 - MGP_LPJ_P0073817 protein_coding protein_coding MGP_LPJ_T0073818.1 MGP_LPJ_G0029936.1 mouse_genomes_project 5 125643373 125644448 - protein_coding processed_transcript MGP_LPJ_T0075594.1 MGP_LPJ_G0030259.1 mouse_genomes_project 5 151027624 151029301 + MGP_LPJ_P0075594 Gm4871 protein_coding protein_coding MGP_LPJ_T0010747.1 MGP_LPJ_G0008865.1 mouse_genomes_project 5 142489510 142489607 + Mir8116 miRNA miRNA MGP_LPJ_T0014877.1 MGP_LPJ_G0012968.1 mouse_genomes_project 5 28223898 28225118 - processed_pseudogene processed_pseudogene MGP_LPJ_T0074040.1 MGP_LPJ_G0029967.1 mouse_genomes_project 5 127365040 127373806 + protein_coding retained_intron MGP_LPJ_T0074041.1 MGP_LPJ_G0029967.1 mouse_genomes_project 5 127365040 127391270 + MGP_LPJ_P0074041 protein_coding protein_coding MGP_LPJ_T0074042.1 MGP_LPJ_G0029967.1 mouse_genomes_project 5 127365040 127392473 + MGP_LPJ_P0074042 protein_coding protein_coding MGP_LPJ_T0074043.1 MGP_LPJ_G0029967.1 mouse_genomes_project 5 127366782 127391270 + MGP_LPJ_P0074043 protein_coding protein_coding MGP_LPJ_T0074044.1 MGP_LPJ_G0029967.1 mouse_genomes_project 5 127386567 127388872 + protein_coding retained_intron MGP_LPJ_T0074045.1 MGP_LPJ_G0029967.1 mouse_genomes_project 5 127387239 127387966 + MGP_LPJ_P0074045 protein_coding protein_coding MGP_LPJ_T0008382.1 MGP_LPJ_G0006808.1 mouse_genomes_project 5 129720068 129733861 + Gm42485 lincRNA lincRNA MGP_LPJ_T0001473.1 MGP_LPJ_G0001390.1 mouse_genomes_project 5 5951626 5951927 + TEC TEC MGP_LPJ_T0001594.1 MGP_LPJ_G0001508.1 mouse_genomes_project 5 48237025 48238974 - TEC TEC MGP_LPJ_T0008235.1 MGP_LPJ_G0006713.1 mouse_genomes_project 5 101525345 101527994 + Gm43253 lincRNA lincRNA MGP_LPJ_T0098645.1 MGP_LPJ_G0036915.1 mouse_genomes_project 5 155959634 155961355 + 4933425D22Rik sense_intronic sense_intronic MGP_LPJ_T0001885.1 MGP_LPJ_G0001796.1 mouse_genomes_project 5 136733238 136735456 - TEC TEC MGP_LPJ_T0001860.1 MGP_LPJ_G0001771.1 mouse_genomes_project 5 132097827 132098601 + TEC TEC MGP_LPJ_T0073388.1 MGP_LPJ_G0029847.1 mouse_genomes_project 5 118120634 118158219 + MGP_LPJ_P0073388 Ankrd13a protein_coding protein_coding MGP_LPJ_T0073389.1 MGP_LPJ_G0029847.1 mouse_genomes_project 5 118120902 118158588 + Ankrd13a protein_coding processed_transcript MGP_LPJ_T0073390.1 MGP_LPJ_G0029847.1 mouse_genomes_project 5 118138450 118156008 + MGP_LPJ_P0073390 Ankrd13a protein_coding protein_coding MGP_LPJ_T0073391.1 MGP_LPJ_G0029847.1 mouse_genomes_project 5 118148149 118158588 + Ankrd13a protein_coding processed_transcript MGP_LPJ_T0073392.1 MGP_LPJ_G0029847.1 mouse_genomes_project 5 118151853 118158588 + Ankrd13a protein_coding processed_transcript MGP_LPJ_T0073393.1 MGP_LPJ_G0029847.1 mouse_genomes_project 5 118151967 118153960 + Ankrd13a protein_coding retained_intron MGP_LPJ_T0004717.1 MGP_LPJ_G0004081.1 mouse_genomes_project 5 47862651 47871666 + Gm20700 antisense antisense MGP_LPJ_T0070010.1 MGP_LPJ_G0029199.1 mouse_genomes_project 5 10636621 10846404 + Sema3a protein_coding processed_transcript MGP_LPJ_T0070011.1 MGP_LPJ_G0029199.1 mouse_genomes_project 5 10636699 10825294 + Sema3a protein_coding retained_intron MGP_LPJ_T0070012.1 MGP_LPJ_G0029199.1 mouse_genomes_project 5 10636800 11084233 + Sema3a protein_coding retained_intron MGP_LPJ_T0070013.1 MGP_LPJ_G0029199.1 mouse_genomes_project 5 10932940 11169363 + MGP_LPJ_P0070013 Sema3a protein_coding protein_coding MGP_LPJ_T0070014.1 MGP_LPJ_G0029199.1 mouse_genomes_project 5 10936553 10991760 + MGP_LPJ_P0070014 Sema3a protein_coding protein_coding MGP_LPJ_T0070015.1 MGP_LPJ_G0029199.1 mouse_genomes_project 5 10936862 11167723 + MGP_LPJ_P0070015 Sema3a protein_coding protein_coding MGP_LPJ_T0070016.1 MGP_LPJ_G0029199.1 mouse_genomes_project 5 10937191 11170940 + MGP_LPJ_P0070016 Sema3a protein_coding protein_coding MGP_LPJ_T0070017.1 MGP_LPJ_G0029199.1 mouse_genomes_project 5 10937206 10991730 + MGP_LPJ_P0070017 Sema3a protein_coding protein_coding MGP_LPJ_T0070018.1 MGP_LPJ_G0029199.1 mouse_genomes_project 5 10937459 11053129 + Sema3a protein_coding processed_transcript MGP_LPJ_T0001589.1 MGP_LPJ_G0001503.1 mouse_genomes_project 5 48077768 48080032 - TEC TEC MGP_LPJ_T0073201.1 MGP_LPJ_G0029814.1 mouse_genomes_project 5 116252923 116265321 - MGP_LPJ_P0073201 Crybb2 protein_coding protein_coding MGP_LPJ_T0073202.1 MGP_LPJ_G0029814.1 mouse_genomes_project 5 116252930 116263970 - MGP_LPJ_P0073202 Crybb2 protein_coding protein_coding MGP_LPJ_T0073203.1 MGP_LPJ_G0029814.1 mouse_genomes_project 5 116258339 116263661 - Crybb2 protein_coding processed_transcript MGP_LPJ_T0073204.1 MGP_LPJ_G0029814.1 mouse_genomes_project 5 116263257 116263975 - Crybb2 protein_coding processed_transcript MGP_LPJ_T0073205.1 MGP_LPJ_G0029814.1 mouse_genomes_project 5 116263895 116264698 - Crybb2 protein_coding processed_transcript MGP_LPJ_T0001679.1 MGP_LPJ_G0001592.1 mouse_genomes_project 5 66566598 66567931 - TEC TEC MGP_LPJ_T0014831.1 MGP_LPJ_G0012922.1 mouse_genomes_project 5 19067831 19068205 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001467.1 MGP_LPJ_G0001384.1 mouse_genomes_project 5 4306258 4310405 - TEC TEC MGP_LPJ_T0075868.1 MGP_LPJ_G0030315.1 mouse_genomes_project 5 157121337 157126621 + Brca2 protein_coding retained_intron MGP_LPJ_T0075869.1 MGP_LPJ_G0030315.1 mouse_genomes_project 5 157121337 157173085 + MGP_LPJ_P0075869 Brca2 protein_coding protein_coding MGP_LPJ_T0075870.1 MGP_LPJ_G0030315.1 mouse_genomes_project 5 157121339 157136728 + Brca2 protein_coding retained_intron MGP_LPJ_T0075871.1 MGP_LPJ_G0030315.1 mouse_genomes_project 5 157121339 157139500 + MGP_LPJ_P0075871 Brca2 protein_coding protein_coding MGP_LPJ_T0075872.1 MGP_LPJ_G0030315.1 mouse_genomes_project 5 157121351 157173086 + MGP_LPJ_P0075872 Brca2 protein_coding protein_coding MGP_LPJ_T0075873.1 MGP_LPJ_G0030315.1 mouse_genomes_project 5 157121397 157125704 + Brca2 protein_coding processed_transcript MGP_LPJ_T0075874.1 MGP_LPJ_G0030315.1 mouse_genomes_project 5 157126250 157129183 + Brca2 protein_coding processed_transcript MGP_LPJ_T0075875.1 MGP_LPJ_G0030315.1 mouse_genomes_project 5 157152232 157154467 + Brca2 protein_coding retained_intron MGP_LPJ_T0075876.1 MGP_LPJ_G0030315.1 mouse_genomes_project 5 157153742 157158528 + Brca2 protein_coding retained_intron MGP_LPJ_T0075877.1 MGP_LPJ_G0030315.1 mouse_genomes_project 5 157156343 157158883 + Brca2 protein_coding retained_intron MGP_LPJ_T0075878.1 MGP_LPJ_G0030315.1 mouse_genomes_project 5 157158598 157162422 + Brca2 protein_coding retained_intron MGP_LPJ_T0075879.1 MGP_LPJ_G0030315.1 mouse_genomes_project 5 157169909 157173085 + Brca2 protein_coding processed_transcript MGP_LPJ_T0075880.1 MGP_LPJ_G0030315.1 mouse_genomes_project 5 157170190 157172671 + Brca2 protein_coding retained_intron MGP_LPJ_T0075881.1 MGP_LPJ_G0030315.1 mouse_genomes_project 5 157171956 157173668 + Brca2 protein_coding retained_intron MGP_LPJ_T0070914.1 MGP_LPJ_G0029357.1 mouse_genomes_project 5 32622186 32632153 + MGP_LPJ_P0070914 Nat8l protein_coding protein_coding MGP_LPJ_T0070915.1 MGP_LPJ_G0029357.1 mouse_genomes_project 5 32625965 32627046 + Nat8l protein_coding processed_transcript MGP_LPJ_T0075544.1 MGP_LPJ_G0030247.1 mouse_genomes_project 5 149939689 149947549 - MGP_LPJ_P0075544 Ocm protein_coding protein_coding MGP_LPJ_T0075545.1 MGP_LPJ_G0030247.1 mouse_genomes_project 5 149939961 149946656 - MGP_LPJ_P0075545 Ocm protein_coding protein_coding MGP_LPJ_T0075546.1 MGP_LPJ_G0030247.1 mouse_genomes_project 5 149945388 149947620 - MGP_LPJ_P0075546 Ocm protein_coding protein_coding MGP_LPJ_T0008211.1 MGP_LPJ_G0006692.1 mouse_genomes_project 5 90205417 90224610 + Gm42912 lincRNA lincRNA MGP_LPJ_T0015158.1 MGP_LPJ_G0013249.1 mouse_genomes_project 5 152441333 152441807 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001500.1 MGP_LPJ_G0001417.1 mouse_genomes_project 5 19079627 19080574 + TEC TEC MGP_LPJ_T0072931.1 MGP_LPJ_G0029756.1 mouse_genomes_project 5 111134772 111144450 - MGP_LPJ_P0072931 Mfsd7a protein_coding protein_coding MGP_LPJ_T0004765.1 MGP_LPJ_G0004120.1 mouse_genomes_project 5 101658809 101660036 + 4930405H06Rik antisense antisense MGP_LPJ_T0001646.1 MGP_LPJ_G0001560.1 mouse_genomes_project 5 58847200 58849440 + TEC TEC MGP_LPJ_T0074620.1 MGP_LPJ_G0030062.1 mouse_genomes_project 5 139478383 139489557 + Rfc2 protein_coding processed_transcript MGP_LPJ_T0074621.1 MGP_LPJ_G0030062.1 mouse_genomes_project 5 139479728 139500165 + MGP_LPJ_P0074621 Rfc2 protein_coding protein_coding MGP_LPJ_T0074622.1 MGP_LPJ_G0030062.1 mouse_genomes_project 5 139479795 139489994 + Rfc2 protein_coding retained_intron MGP_LPJ_T0074623.1 MGP_LPJ_G0030062.1 mouse_genomes_project 5 139489879 139496315 + MGP_LPJ_P0074623 Rfc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074624.1 MGP_LPJ_G0030062.1 mouse_genomes_project 5 139491064 139493672 + Rfc2 protein_coding retained_intron MGP_LPJ_T0074625.1 MGP_LPJ_G0030062.1 mouse_genomes_project 5 139492478 139496688 + Rfc2 protein_coding retained_intron MGP_LPJ_T0074305.1 MGP_LPJ_G0030010.1 mouse_genomes_project 5 129342420 129369334 - MGP_LPJ_P0074305 Ncor2 protein_coding protein_coding MGP_LPJ_T0074306.1 MGP_LPJ_G0030010.1 mouse_genomes_project 5 129342420 129513907 - MGP_LPJ_P0074306 Ncor2 protein_coding protein_coding MGP_LPJ_T0074307.1 MGP_LPJ_G0030010.1 mouse_genomes_project 5 129342420 129513907 - MGP_LPJ_P0074307 Ncor2 protein_coding protein_coding MGP_LPJ_T0074308.1 MGP_LPJ_G0030010.1 mouse_genomes_project 5 129342422 129513907 - MGP_LPJ_P0074308 Ncor2 protein_coding protein_coding MGP_LPJ_T0074309.1 MGP_LPJ_G0030010.1 mouse_genomes_project 5 129342429 129513835 - MGP_LPJ_P0074309 Ncor2 protein_coding protein_coding MGP_LPJ_T0074310.1 MGP_LPJ_G0030010.1 mouse_genomes_project 5 129343102 129513907 - MGP_LPJ_P0074310 Ncor2 protein_coding protein_coding MGP_LPJ_T0074311.1 MGP_LPJ_G0030010.1 mouse_genomes_project 5 129343102 129455307 - MGP_LPJ_P0074311 Ncor2 protein_coding protein_coding MGP_LPJ_T0074312.1 MGP_LPJ_G0030010.1 mouse_genomes_project 5 129343159 129352034 - MGP_LPJ_P0074312 Ncor2 protein_coding protein_coding MGP_LPJ_T0074313.1 MGP_LPJ_G0030010.1 mouse_genomes_project 5 129343401 129351573 - MGP_LPJ_P0074313 Ncor2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074314.1 MGP_LPJ_G0030010.1 mouse_genomes_project 5 129343499 129349733 - Ncor2 protein_coding retained_intron MGP_LPJ_T0074315.1 MGP_LPJ_G0030010.1 mouse_genomes_project 5 129351607 129353436 - MGP_LPJ_P0074315 Ncor2 protein_coding protein_coding MGP_LPJ_T0074316.1 MGP_LPJ_G0030010.1 mouse_genomes_project 5 129351613 129352599 - Ncor2 protein_coding retained_intron MGP_LPJ_T0074317.1 MGP_LPJ_G0030010.1 mouse_genomes_project 5 129357319 129386407 - MGP_LPJ_P0074317 Ncor2 protein_coding protein_coding MGP_LPJ_T0074318.1 MGP_LPJ_G0030010.1 mouse_genomes_project 5 129375825 129383996 - Ncor2 protein_coding retained_intron MGP_LPJ_T0074319.1 MGP_LPJ_G0030010.1 mouse_genomes_project 5 129378951 129386418 - MGP_LPJ_P0074319 Ncor2 protein_coding protein_coding MGP_LPJ_T0075322.1 MGP_LPJ_G0030200.1 mouse_genomes_project 5 146001395 146005620 - MGP_LPJ_P0075322 Mrm2 protein_coding protein_coding MGP_LPJ_T0018163.1 MGP_LPJ_G0015537.1 mouse_genomes_project 5 156467267 156474923 + Gm43451 processed_transcript lincRNA MGP_LPJ_T0018164.1 MGP_LPJ_G0015537.1 mouse_genomes_project 5 156474298 156475168 + Gm43451 processed_transcript retained_intron MGP_LPJ_T0001881.1 MGP_LPJ_G0001792.1 mouse_genomes_project 5 136471454 136472609 - TEC TEC MGP_LPJ_T0072382.1 MGP_LPJ_G0029639.1 mouse_genomes_project 5 93000773 93118367 + MGP_LPJ_P0072382 Parm1 protein_coding protein_coding MGP_LPJ_T0101350.1 MGP_LPJ_G0039554.1 mouse_genomes_project 5 31726369 31727531 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101351.1 MGP_LPJ_G0039554.1 mouse_genomes_project 5 31727056 31727843 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0004841.1 MGP_LPJ_G0004170.1 mouse_genomes_project 5 125824510 125834276 - Gm16552 antisense antisense MGP_LPJ_T0008330.1 MGP_LPJ_G0006771.1 mouse_genomes_project 5 118785458 118786881 - 4930401G09Rik lincRNA lincRNA MGP_LPJ_T0001481.1 MGP_LPJ_G0001398.1 mouse_genomes_project 5 11085181 11087911 + TEC TEC MGP_LPJ_T0074782.1 MGP_LPJ_G0030095.1 mouse_genomes_project 5 140827706 140866716 + Srrm3 protein_coding retained_intron MGP_LPJ_T0074783.1 MGP_LPJ_G0030095.1 mouse_genomes_project 5 140827713 140877049 + MGP_LPJ_P0074783 Srrm3 protein_coding protein_coding MGP_LPJ_T0074784.1 MGP_LPJ_G0030095.1 mouse_genomes_project 5 140840804 140897864 + MGP_LPJ_P0074784 Srrm3 protein_coding nonsense_mediated_decay MGP_LPJ_T0074785.1 MGP_LPJ_G0030095.1 mouse_genomes_project 5 140840804 140899527 + MGP_LPJ_P0074785 Srrm3 protein_coding protein_coding MGP_LPJ_T0074786.1 MGP_LPJ_G0030095.1 mouse_genomes_project 5 140879247 140882338 + Srrm3 protein_coding retained_intron MGP_LPJ_T0074787.1 MGP_LPJ_G0030095.1 mouse_genomes_project 5 140891377 140892969 + Srrm3 protein_coding retained_intron MGP_LPJ_T0074788.1 MGP_LPJ_G0030095.1 mouse_genomes_project 5 140891841 140899531 + MGP_LPJ_P0074788 Srrm3 protein_coding unknown_likely_coding MGP_LPJ_T0001634.1 MGP_LPJ_G0001548.1 mouse_genomes_project 5 57457364 57459542 + TEC TEC MGP_LPJ_T0008200.1 MGP_LPJ_G0006684.1 mouse_genomes_project 5 78165607 78168965 + 1700017L05Rik lincRNA lincRNA MGP_LPJ_T0001862.1 MGP_LPJ_G0001773.1 mouse_genomes_project 5 132807030 132810224 - TEC TEC MGP_LPJ_T0015006.1 MGP_LPJ_G0013097.1 mouse_genomes_project 5 88487308 88488860 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001619.1 MGP_LPJ_G0001533.1 mouse_genomes_project 5 51306045 51307156 - TEC TEC MGP_LPJ_T0001573.1 MGP_LPJ_G0001487.1 mouse_genomes_project 5 44723457 44725289 + TEC TEC MGP_LPJ_T0014892.1 MGP_LPJ_G0012983.1 mouse_genomes_project 5 32378713 32378884 + processed_pseudogene processed_pseudogene MGP_LPJ_T0074721.1 MGP_LPJ_G0030081.1 mouse_genomes_project 5 140200446 140202739 - MGP_LPJ_P0074721 Fzd9 protein_coding protein_coding MGP_LPJ_T0070345.1 MGP_LPJ_G0029262.1 mouse_genomes_project 5 23908717 23926201 - MGP_LPJ_P0070345 Xrcc2 protein_coding protein_coding MGP_LPJ_T0070346.1 MGP_LPJ_G0029262.1 mouse_genomes_project 5 23910957 23912345 - Xrcc2 protein_coding processed_transcript MGP_LPJ_T0070347.1 MGP_LPJ_G0029262.1 mouse_genomes_project 5 23916365 23926149 - MGP_LPJ_P0070347 Xrcc2 protein_coding protein_coding MGP_LPJ_T0070348.1 MGP_LPJ_G0029262.1 mouse_genomes_project 5 23917122 23926140 - Xrcc2 protein_coding retained_intron MGP_LPJ_T0004659.1 MGP_LPJ_G0004037.1 mouse_genomes_project 5 12341224 12391983 - antisense antisense MGP_LPJ_T0004660.1 MGP_LPJ_G0004037.1 mouse_genomes_project 5 12368049 12391968 - antisense antisense MGP_LPJ_T0001895.1 MGP_LPJ_G0001806.1 mouse_genomes_project 5 137240455 137241730 - TEC TEC MGP_LPJ_T0001855.1 MGP_LPJ_G0001766.1 mouse_genomes_project 5 129672077 129674837 - TEC TEC MGP_LPJ_T0008278.1 MGP_LPJ_G0006744.1 mouse_genomes_project 5 111055807 111056745 - Gm42518 lincRNA lincRNA MGP_LPJ_T0098426.1 MGP_LPJ_G0036707.1 mouse_genomes_project 5 127800422 127800559 + Gm24682 scaRNA scaRNA MGP_LPJ_T0070695.1 MGP_LPJ_G0029323.1 mouse_genomes_project 5 29739829 29743524 - MGP_LPJ_P0070695 Fndc4 protein_coding protein_coding MGP_LPJ_T0070696.1 MGP_LPJ_G0029323.1 mouse_genomes_project 5 29740473 29743459 - MGP_LPJ_P0070696 Fndc4 protein_coding protein_coding MGP_LPJ_T0070697.1 MGP_LPJ_G0029323.1 mouse_genomes_project 5 29740473 29741301 - MGP_LPJ_P0070697 Fndc4 protein_coding nonsense_mediated_decay MGP_LPJ_T0070698.1 MGP_LPJ_G0029323.1 mouse_genomes_project 5 29740859 29741554 - Fndc4 protein_coding retained_intron MGP_LPJ_T0070699.1 MGP_LPJ_G0029323.1 mouse_genomes_project 5 29741273 29743021 - MGP_LPJ_P0070699 Fndc4 protein_coding protein_coding MGP_LPJ_T0070700.1 MGP_LPJ_G0029323.1 mouse_genomes_project 5 29741673 29742847 - Fndc4 protein_coding retained_intron MGP_LPJ_T0070701.1 MGP_LPJ_G0029323.1 mouse_genomes_project 5 29742302 29743668 - MGP_LPJ_P0070701 Fndc4 protein_coding protein_coding MGP_LPJ_T0015051.1 MGP_LPJ_G0013142.1 mouse_genomes_project 5 108382483 108382949 + processed_pseudogene processed_pseudogene MGP_LPJ_T0075206.1 MGP_LPJ_G0030176.1 mouse_genomes_project 5 144365163 144367170 + Gm5294 protein_coding unprocessed_pseudogene MGP_LPJ_T0075207.1 MGP_LPJ_G0030176.1 mouse_genomes_project 5 144365873 144367413 + MGP_LPJ_P0075207 Gm5294 protein_coding protein_coding MGP_LPJ_T0004797.1 MGP_LPJ_G0004140.1 mouse_genomes_project 5 113467364 113469322 + Gm42596 antisense antisense MGP_LPJ_T0008090.1 MGP_LPJ_G0006600.1 mouse_genomes_project 5 26828552 26843760 + Gm26894 lincRNA lincRNA MGP_LPJ_T0004690.1 MGP_LPJ_G0004062.1 mouse_genomes_project 5 33348290 33372336 - Gm42560 antisense antisense MGP_LPJ_T0071723.1 MGP_LPJ_G0029490.1 mouse_genomes_project 5 66916748 66929408 + MGP_LPJ_P0071723 Uchl1 protein_coding protein_coding MGP_LPJ_T0071724.1 MGP_LPJ_G0029490.1 mouse_genomes_project 5 66916899 66917505 + Uchl1 protein_coding retained_intron MGP_LPJ_T0071725.1 MGP_LPJ_G0029490.1 mouse_genomes_project 5 66917551 66929403 + Uchl1 protein_coding retained_intron MGP_LPJ_T0071726.1 MGP_LPJ_G0029490.1 mouse_genomes_project 5 66925876 66929112 + Uchl1 protein_coding retained_intron MGP_LPJ_T0010734.1 MGP_LPJ_G0008852.1 mouse_genomes_project 5 127804792 127804851 - Mir7647 miRNA miRNA MGP_LPJ_T0004744.1 MGP_LPJ_G0004105.1 mouse_genomes_project 5 76917149 76917801 + Gm7467 antisense antisense MGP_LPJ_T0072740.1 MGP_LPJ_G0029713.1 mouse_genomes_project 5 106558115 106570245 + MGP_LPJ_P0072740 Ibsp protein_coding protein_coding MGP_LPJ_T0074186.1 MGP_LPJ_G0029991.1 mouse_genomes_project 5 128453076 128454030 + MGP_LPJ_P0074186 Arl6ip4 protein_coding protein_coding MGP_LPJ_T0074187.1 MGP_LPJ_G0029991.1 mouse_genomes_project 5 128453086 128455184 + MGP_LPJ_P0074187 Arl6ip4 protein_coding protein_coding MGP_LPJ_T0074188.1 MGP_LPJ_G0029991.1 mouse_genomes_project 5 128453109 128455084 + MGP_LPJ_P0074188 Arl6ip4 protein_coding protein_coding MGP_LPJ_T0074189.1 MGP_LPJ_G0029991.1 mouse_genomes_project 5 128453666 128455022 + MGP_LPJ_P0074189 Arl6ip4 protein_coding protein_coding MGP_LPJ_T0074190.1 MGP_LPJ_G0029991.1 mouse_genomes_project 5 128454298 128455179 + MGP_LPJ_P0074190 Arl6ip4 protein_coding protein_coding MGP_LPJ_T0001760.1 MGP_LPJ_G0001672.1 mouse_genomes_project 5 103947969 103950563 + TEC TEC MGP_LPJ_T0015128.1 MGP_LPJ_G0013219.1 mouse_genomes_project 5 144050916 144051774 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004822.1 MGP_LPJ_G0004158.1 mouse_genomes_project 5 120682975 120688135 + 9530046B11Rik antisense antisense MGP_LPJ_T0001691.1 MGP_LPJ_G0001604.1 mouse_genomes_project 5 67882136 67882746 - TEC TEC MGP_LPJ_T0075154.1 MGP_LPJ_G0030166.1 mouse_genomes_project 5 143652314 143656222 + MGP_LPJ_P0075154 Lamtor4 protein_coding protein_coding MGP_LPJ_T0075155.1 MGP_LPJ_G0030166.1 mouse_genomes_project 5 143652663 143656225 + Lamtor4 protein_coding processed_transcript MGP_LPJ_T0073849.1 MGP_LPJ_G0029940.1 mouse_genomes_project 5 125926108 125949654 - MGP_LPJ_P0073849 Sh2b3 protein_coding nonsense_mediated_decay MGP_LPJ_T0073850.1 MGP_LPJ_G0029940.1 mouse_genomes_project 5 125926268 125949688 - MGP_LPJ_P0073850 Sh2b3 protein_coding protein_coding MGP_LPJ_T0073851.1 MGP_LPJ_G0029940.1 mouse_genomes_project 5 125926932 125939358 - MGP_LPJ_P0073851 Sh2b3 protein_coding protein_coding MGP_LPJ_T0073852.1 MGP_LPJ_G0029940.1 mouse_genomes_project 5 125927630 125947795 - MGP_LPJ_P0073852 Sh2b3 protein_coding protein_coding MGP_LPJ_T0073853.1 MGP_LPJ_G0029940.1 mouse_genomes_project 5 125927836 125949679 - MGP_LPJ_P0073853 Sh2b3 protein_coding protein_coding MGP_LPJ_T0073854.1 MGP_LPJ_G0029940.1 mouse_genomes_project 5 125927910 125949646 - MGP_LPJ_P0073854 Sh2b3 protein_coding protein_coding MGP_LPJ_T0073855.1 MGP_LPJ_G0029940.1 mouse_genomes_project 5 125929727 125950475 - MGP_LPJ_P0073855 Sh2b3 protein_coding protein_coding MGP_LPJ_T0073856.1 MGP_LPJ_G0029940.1 mouse_genomes_project 5 125939184 125947955 - MGP_LPJ_P0073856 Sh2b3 protein_coding protein_coding MGP_LPJ_T0099624.1 MGP_LPJ_G0037887.1 mouse_genomes_project 5 141147531 141147703 - Gm22214 snRNA snRNA MGP_LPJ_T0014964.1 MGP_LPJ_G0013055.1 mouse_genomes_project 5 64366736 64367235 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001613.1 MGP_LPJ_G0001527.1 mouse_genomes_project 5 50881896 50883437 - TEC TEC MGP_LPJ_T0011848.1 MGP_LPJ_G0009943.1 mouse_genomes_project 5 124691135 124693086 + Oas1b polymorphic_pseudogene processed_transcript MGP_LPJ_T0011849.1 MGP_LPJ_G0009943.1 mouse_genomes_project 5 124691138 124714316 + MGP_LPJ_P0011849 Oas1b polymorphic_pseudogene polymorphic_pseudogene MGP_LPJ_T0073734.1 MGP_LPJ_G0009943.1 mouse_genomes_project 5 124691357 124711463 + MGP_LPJ_P0073734 Oas1b polymorphic_pseudogene unknown_likely_coding MGP_LPJ_T0008225.1 MGP_LPJ_G0006706.1 mouse_genomes_project 5 99075390 99082190 + Gm43146 lincRNA lincRNA MGP_LPJ_T0073453.1 MGP_LPJ_G0029863.1 mouse_genomes_project 5 118663541 118697343 - MGP_LPJ_P0073453 Rnf10 protein_coding protein_coding MGP_LPJ_T0073454.1 MGP_LPJ_G0029863.1 mouse_genomes_project 5 118663899 118697337 - MGP_LPJ_P0073454 Rnf10 protein_coding protein_coding MGP_LPJ_T0073455.1 MGP_LPJ_G0029863.1 mouse_genomes_project 5 118663899 118697340 - MGP_LPJ_P0073455 Rnf10 protein_coding protein_coding MGP_LPJ_T0073456.1 MGP_LPJ_G0029863.1 mouse_genomes_project 5 118663904 118664832 - Rnf10 protein_coding retained_intron MGP_LPJ_T0073457.1 MGP_LPJ_G0029863.1 mouse_genomes_project 5 118663908 118696752 - MGP_LPJ_P0073457 Rnf10 protein_coding nonsense_mediated_decay MGP_LPJ_T0073458.1 MGP_LPJ_G0029863.1 mouse_genomes_project 5 118665832 118668217 - Rnf10 protein_coding retained_intron MGP_LPJ_T0073459.1 MGP_LPJ_G0029863.1 mouse_genomes_project 5 118670824 118671619 - Rnf10 protein_coding processed_transcript MGP_LPJ_T0073460.1 MGP_LPJ_G0029863.1 mouse_genomes_project 5 118673425 118680169 - Rnf10 protein_coding retained_intron MGP_LPJ_T0073461.1 MGP_LPJ_G0029863.1 mouse_genomes_project 5 118673446 118684775 - Rnf10 protein_coding processed_transcript MGP_LPJ_T0073462.1 MGP_LPJ_G0029863.1 mouse_genomes_project 5 118680762 118682441 - Rnf10 protein_coding retained_intron MGP_LPJ_T0073463.1 MGP_LPJ_G0029863.1 mouse_genomes_project 5 118695077 118697340 - Rnf10 protein_coding retained_intron MGP_LPJ_T0100860.1 MGP_LPJ_G0039123.1 mouse_genomes_project 5 125187588 125187722 + Gm26205 snoRNA snoRNA MGP_LPJ_T0008293.1 MGP_LPJ_G0006751.1 mouse_genomes_project 5 113812989 113814246 + Gm26515 lincRNA lincRNA MGP_LPJ_T0014793.1 MGP_LPJ_G0012884.1 mouse_genomes_project 5 1725724 1726556 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015059.1 MGP_LPJ_G0013150.1 mouse_genomes_project 5 109999342 109999979 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018141.1 MGP_LPJ_G0015531.1 mouse_genomes_project 5 134418317 134429080 + processed_transcript processed_transcript MGP_LPJ_T0018142.1 MGP_LPJ_G0015531.1 mouse_genomes_project 5 134418758 134428525 + processed_transcript processed_transcript MGP_LPJ_T0018143.1 MGP_LPJ_G0015531.1 mouse_genomes_project 5 134420997 134423153 + processed_transcript retained_intron MGP_LPJ_T0018144.1 MGP_LPJ_G0015531.1 mouse_genomes_project 5 134424253 134425556 + processed_transcript retained_intron MGP_LPJ_T0018145.1 MGP_LPJ_G0015531.1 mouse_genomes_project 5 134425630 134428570 + processed_transcript processed_transcript MGP_LPJ_T0018146.1 MGP_LPJ_G0015531.1 mouse_genomes_project 5 134427677 134428687 + processed_transcript processed_transcript MGP_LPJ_T0069803.1 MGP_LPJ_G0029167.1 mouse_genomes_project 5 658340 699329 + Krit1 protein_coding retained_intron MGP_LPJ_T0069804.1 MGP_LPJ_G0029167.1 mouse_genomes_project 5 658340 699404 + MGP_LPJ_P0069804 Krit1 protein_coding protein_coding MGP_LPJ_T0069805.1 MGP_LPJ_G0029167.1 mouse_genomes_project 5 658341 666889 + Krit1 protein_coding retained_intron MGP_LPJ_T0069806.1 MGP_LPJ_G0029167.1 mouse_genomes_project 5 658345 699404 + MGP_LPJ_P0069806 Krit1 protein_coding nonsense_mediated_decay MGP_LPJ_T0069807.1 MGP_LPJ_G0029167.1 mouse_genomes_project 5 658346 703609 + MGP_LPJ_P0069807 Krit1 protein_coding protein_coding MGP_LPJ_T0069808.1 MGP_LPJ_G0029167.1 mouse_genomes_project 5 658561 702348 + MGP_LPJ_P0069808 Krit1 protein_coding protein_coding MGP_LPJ_T0069809.1 MGP_LPJ_G0029167.1 mouse_genomes_project 5 659396 664882 + MGP_LPJ_P0069809 Krit1 protein_coding protein_coding MGP_LPJ_T0069810.1 MGP_LPJ_G0029167.1 mouse_genomes_project 5 660449 666682 + Krit1 protein_coding retained_intron MGP_LPJ_T0069811.1 MGP_LPJ_G0029167.1 mouse_genomes_project 5 667950 673742 + Krit1 protein_coding retained_intron MGP_LPJ_T0069812.1 MGP_LPJ_G0029167.1 mouse_genomes_project 5 670863 675127 + Krit1 protein_coding retained_intron MGP_LPJ_T0069813.1 MGP_LPJ_G0029167.1 mouse_genomes_project 5 678332 680246 + Krit1 protein_coding retained_intron MGP_LPJ_T0014824.1 MGP_LPJ_G0012915.1 mouse_genomes_project 5 16210299 16210759 + processed_pseudogene processed_pseudogene MGP_LPJ_T0073336.1 MGP_LPJ_G0029839.1 mouse_genomes_project 5 117684979 117727573 + MGP_LPJ_P0073336 Ube3b protein_coding protein_coding MGP_LPJ_T0073337.1 MGP_LPJ_G0029839.1 mouse_genomes_project 5 117685198 117727572 + MGP_LPJ_P0073337 Ube3b protein_coding nonsense_mediated_decay MGP_LPJ_T0073338.1 MGP_LPJ_G0029839.1 mouse_genomes_project 5 117685205 117698543 + MGP_LPJ_P0073338 Ube3b protein_coding nonsense_mediated_decay MGP_LPJ_T0073339.1 MGP_LPJ_G0029839.1 mouse_genomes_project 5 117705169 117727572 + MGP_LPJ_P0073339 Ube3b protein_coding nonsense_mediated_decay MGP_LPJ_T0073340.1 MGP_LPJ_G0029839.1 mouse_genomes_project 5 117709127 117717534 + Ube3b protein_coding processed_transcript MGP_LPJ_T0004732.1 MGP_LPJ_G0004095.1 mouse_genomes_project 5 67696385 67706670 + Gm26756 antisense antisense MGP_LPJ_T0008360.1 MGP_LPJ_G0006795.1 mouse_genomes_project 5 123695876 123698693 + Gm43269 lincRNA lincRNA MGP_LPJ_T0008395.1 MGP_LPJ_G0006814.1 mouse_genomes_project 5 131174155 131177122 - Gm43754 lincRNA lincRNA MGP_LPJ_T0014919.1 MGP_LPJ_G0013010.1 mouse_genomes_project 5 47222741 47226863 + processed_pseudogene processed_pseudogene MGP_LPJ_T0071277.1 MGP_LPJ_G0029415.1 mouse_genomes_project 5 37593535 37777493 - MGP_LPJ_P0071277 Clnk protein_coding protein_coding MGP_LPJ_T0071278.1 MGP_LPJ_G0029415.1 mouse_genomes_project 5 37593535 37777493 - MGP_LPJ_P0071278 Clnk protein_coding protein_coding MGP_LPJ_T0004684.1 MGP_LPJ_G0004056.1 mouse_genomes_project 5 30840847 30876441 - Gm36840 antisense antisense MGP_LPJ_T0008263.1 MGP_LPJ_G0006731.1 mouse_genomes_project 5 107914415 107918961 + Gm42749 lincRNA lincRNA MGP_LPJ_T0008264.1 MGP_LPJ_G0006731.1 mouse_genomes_project 5 107918334 107920719 + Gm42749 lincRNA lincRNA MGP_LPJ_T0075087.1 MGP_LPJ_G0030150.1 mouse_genomes_project 5 143101869 143111674 - protein_coding retained_intron MGP_LPJ_T0008160.1 MGP_LPJ_G0006653.1 mouse_genomes_project 5 64429773 64433648 + Gm43837 lincRNA lincRNA MGP_LPJ_T0004835.1 MGP_LPJ_G0004164.1 mouse_genomes_project 5 124232327 124252064 - Gm27199 antisense antisense MGP_LPJ_T0001734.1 MGP_LPJ_G0001646.1 mouse_genomes_project 5 82809684 82810692 + TEC TEC MGP_LPJ_T0008276.1 MGP_LPJ_G0006742.1 mouse_genomes_project 5 110330798 110336083 - 4930428O21Rik lincRNA lincRNA MGP_LPJ_T0070795.1 MGP_LPJ_G0029339.1 mouse_genomes_project 5 31422539 31450710 + MGP_LPJ_P0070795 Depdc5 protein_coding protein_coding MGP_LPJ_T0070796.1 MGP_LPJ_G0029339.1 mouse_genomes_project 5 31422544 31460148 + MGP_LPJ_P0070796 Depdc5 protein_coding protein_coding MGP_LPJ_T0070797.1 MGP_LPJ_G0029339.1 mouse_genomes_project 5 31422550 31560367 + MGP_LPJ_P0070797 Depdc5 protein_coding protein_coding MGP_LPJ_T0070798.1 MGP_LPJ_G0029339.1 mouse_genomes_project 5 31422551 31426836 + MGP_LPJ_P0070798 Depdc5 protein_coding protein_coding MGP_LPJ_T0070799.1 MGP_LPJ_G0029339.1 mouse_genomes_project 5 31422559 31525749 + MGP_LPJ_P0070799 Depdc5 protein_coding protein_coding MGP_LPJ_T0070800.1 MGP_LPJ_G0029339.1 mouse_genomes_project 5 31422572 31563367 + MGP_LPJ_P0070800 Depdc5 protein_coding protein_coding MGP_LPJ_T0070801.1 MGP_LPJ_G0029339.1 mouse_genomes_project 5 31422598 31472972 + Depdc5 protein_coding retained_intron MGP_LPJ_T0070802.1 MGP_LPJ_G0029339.1 mouse_genomes_project 5 31422608 31451329 + Depdc5 protein_coding retained_intron MGP_LPJ_T0070803.1 MGP_LPJ_G0029339.1 mouse_genomes_project 5 31422608 31490608 + MGP_LPJ_P0070803 Depdc5 protein_coding nonsense_mediated_decay MGP_LPJ_T0070804.1 MGP_LPJ_G0029339.1 mouse_genomes_project 5 31422610 31442240 + MGP_LPJ_P0070804 Depdc5 protein_coding protein_coding MGP_LPJ_T0070805.1 MGP_LPJ_G0029339.1 mouse_genomes_project 5 31422615 31525747 + Depdc5 protein_coding processed_transcript MGP_LPJ_T0070806.1 MGP_LPJ_G0029339.1 mouse_genomes_project 5 31422993 31426848 + MGP_LPJ_P0070806 Depdc5 protein_coding protein_coding MGP_LPJ_T0070807.1 MGP_LPJ_G0029339.1 mouse_genomes_project 5 31423425 31560801 + MGP_LPJ_P0070807 Depdc5 protein_coding protein_coding MGP_LPJ_T0070808.1 MGP_LPJ_G0029339.1 mouse_genomes_project 5 31469329 31484165 + MGP_LPJ_P0070808 Depdc5 protein_coding nonsense_mediated_decay MGP_LPJ_T0070809.1 MGP_LPJ_G0029339.1 mouse_genomes_project 5 31490633 31560794 + MGP_LPJ_P0070809 Depdc5 protein_coding nonsense_mediated_decay MGP_LPJ_T0070810.1 MGP_LPJ_G0029339.1 mouse_genomes_project 5 31490731 31560801 + MGP_LPJ_P0070810 Depdc5 protein_coding protein_coding MGP_LPJ_T0070811.1 MGP_LPJ_G0029339.1 mouse_genomes_project 5 31510713 31511927 + Depdc5 protein_coding retained_intron MGP_LPJ_T0070812.1 MGP_LPJ_G0029339.1 mouse_genomes_project 5 31511008 31534149 + MGP_LPJ_P0070812 Depdc5 protein_coding protein_coding MGP_LPJ_T0070813.1 MGP_LPJ_G0029339.1 mouse_genomes_project 5 31537133 31543360 + Depdc5 protein_coding retained_intron MGP_LPJ_T0073394.1 MGP_LPJ_G0029848.1 mouse_genomes_project 5 118160583 118174337 - MGP_LPJ_P0073394 1500011B03Rik protein_coding protein_coding MGP_LPJ_T0010723.1 MGP_LPJ_G0008841.1 mouse_genomes_project 5 114039141 114039250 + Mir701 miRNA miRNA MGP_LPJ_T0001842.1 MGP_LPJ_G0001754.1 mouse_genomes_project 5 127249830 127252627 + TEC TEC MGP_LPJ_T0010690.1 MGP_LPJ_G0008808.1 mouse_genomes_project 5 28602198 28602276 + Mir1960 miRNA miRNA MGP_LPJ_T0071810.1 MGP_LPJ_G0029506.1 mouse_genomes_project 5 71293899 71437081 - MGP_LPJ_P0071810 Gabra2 protein_coding protein_coding MGP_LPJ_T0071811.1 MGP_LPJ_G0029506.1 mouse_genomes_project 5 71295787 71437041 - MGP_LPJ_P0071811 Gabra2 protein_coding nonsense_mediated_decay MGP_LPJ_T0071812.1 MGP_LPJ_G0029506.1 mouse_genomes_project 5 71297216 71353500 - Gabra2 protein_coding retained_intron MGP_LPJ_T0071813.1 MGP_LPJ_G0029506.1 mouse_genomes_project 5 71297322 71435912 - MGP_LPJ_P0071813 Gabra2 protein_coding nonsense_mediated_decay MGP_LPJ_T0071814.1 MGP_LPJ_G0029506.1 mouse_genomes_project 5 71309670 71436472 - Gabra2 protein_coding processed_transcript MGP_LPJ_T0071815.1 MGP_LPJ_G0029506.1 mouse_genomes_project 5 71433021 71436137 - Gabra2 protein_coding retained_intron MGP_LPJ_T0100845.1 MGP_LPJ_G0039108.1 mouse_genomes_project 5 89132327 89132450 - Gm24314 snoRNA snoRNA MGP_LPJ_T0015062.1 MGP_LPJ_G0013153.1 mouse_genomes_project 5 110654963 110655190 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004916.1 MGP_LPJ_G0004223.1 mouse_genomes_project 5 155797564 155802681 - Gm19719 antisense antisense MGP_LPJ_T0072882.1 MGP_LPJ_G0029746.1 mouse_genomes_project 5 110467977 110469655 + MGP_LPJ_P0072882 Ube2d2b protein_coding protein_coding MGP_LPJ_T0014926.1 MGP_LPJ_G0013017.1 mouse_genomes_project 5 50426860 50427341 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008351.1 MGP_LPJ_G0006788.1 mouse_genomes_project 5 122937784 122943253 - Gm7538 lincRNA lincRNA MGP_LPJ_T0098276.1 MGP_LPJ_G0036557.1 mouse_genomes_project 5 120772011 120772132 + n-R5s174 rRNA rRNA MGP_LPJ_T0071830.1 MGP_LPJ_G0029511.1 mouse_genomes_project 5 72699451 72903290 - MGP_LPJ_P0071830 Corin protein_coding protein_coding MGP_LPJ_T0071831.1 MGP_LPJ_G0029511.1 mouse_genomes_project 5 72699452 72903025 - MGP_LPJ_P0071831 Corin protein_coding protein_coding MGP_LPJ_T0071832.1 MGP_LPJ_G0029511.1 mouse_genomes_project 5 72700912 72903250 - MGP_LPJ_P0071832 Corin protein_coding protein_coding MGP_LPJ_T0071833.1 MGP_LPJ_G0029511.1 mouse_genomes_project 5 72700912 72903256 - MGP_LPJ_P0071833 Corin protein_coding protein_coding MGP_LPJ_T0071834.1 MGP_LPJ_G0029511.1 mouse_genomes_project 5 72700924 72903256 - MGP_LPJ_P0071834 Corin protein_coding protein_coding MGP_LPJ_T0071835.1 MGP_LPJ_G0029511.1 mouse_genomes_project 5 72750054 72757174 - Corin protein_coding retained_intron MGP_LPJ_T0071836.1 MGP_LPJ_G0029511.1 mouse_genomes_project 5 72754858 72775515 - Corin protein_coding processed_transcript MGP_LPJ_T0099614.1 MGP_LPJ_G0037877.1 mouse_genomes_project 5 121790606 121790713 - Gm26411 snRNA snRNA MGP_LPJ_T0008207.1 MGP_LPJ_G0006688.1 mouse_genomes_project 5 86904560 86906538 + Gm43567 lincRNA lincRNA MGP_LPJ_T0072766.1 MGP_LPJ_G0029726.1 mouse_genomes_project 5 108024486 108120785 + MGP_LPJ_P0072766 Lrrc8c protein_coding protein_coding MGP_LPJ_T0072767.1 MGP_LPJ_G0029726.1 mouse_genomes_project 5 108024514 108087422 + MGP_LPJ_P0072767 Lrrc8c protein_coding protein_coding MGP_LPJ_T0072768.1 MGP_LPJ_G0029726.1 mouse_genomes_project 5 108024571 108049627 + Lrrc8c protein_coding retained_intron MGP_LPJ_T0072769.1 MGP_LPJ_G0029726.1 mouse_genomes_project 5 108063869 108114662 + MGP_LPJ_P0072769 Lrrc8c protein_coding protein_coding MGP_LPJ_T0100840.1 MGP_LPJ_G0039103.1 mouse_genomes_project 5 78372687 78372810 - Gm22011 snoRNA snoRNA MGP_LPJ_T0072986.1 MGP_LPJ_G0029765.1 mouse_genomes_project 5 111457971 111478916 - MGP_LPJ_P0072986 protein_coding protein_coding MGP_LPJ_T0072987.1 MGP_LPJ_G0029765.1 mouse_genomes_project 5 111458052 111478879 - MGP_LPJ_P0072987 protein_coding protein_coding MGP_LPJ_T0072988.1 MGP_LPJ_G0029765.1 mouse_genomes_project 5 111458491 111506454 - MGP_LPJ_P0072988 protein_coding protein_coding MGP_LPJ_T0072989.1 MGP_LPJ_G0029765.1 mouse_genomes_project 5 111460324 111477375 - MGP_LPJ_P0072989 protein_coding protein_coding MGP_LPJ_T0075307.1 MGP_LPJ_G0030195.1 mouse_genomes_project 5 145439562 145463963 - MGP_LPJ_P0075307 Gm26938 protein_coding protein_coding MGP_LPJ_T0100846.1 MGP_LPJ_G0039109.1 mouse_genomes_project 5 91259676 91259805 + Gm25758 snoRNA snoRNA MGP_LPJ_T0008287.1 MGP_LPJ_G0006749.1 mouse_genomes_project 5 113542836 113553416 + A630023P12Rik lincRNA lincRNA MGP_LPJ_T0008288.1 MGP_LPJ_G0006749.1 mouse_genomes_project 5 113542857 113543436 + A630023P12Rik lincRNA lincRNA MGP_LPJ_T0008289.1 MGP_LPJ_G0006749.1 mouse_genomes_project 5 113548841 113552570 + A630023P12Rik lincRNA lincRNA MGP_LPJ_T0008290.1 MGP_LPJ_G0006749.1 mouse_genomes_project 5 113548877 113549756 + A630023P12Rik lincRNA lincRNA MGP_LPJ_T0008291.1 MGP_LPJ_G0006749.1 mouse_genomes_project 5 113548908 113553424 + A630023P12Rik lincRNA lincRNA MGP_LPJ_T0071122.1 MGP_LPJ_G0029390.1 mouse_genomes_project 5 35271591 35275176 + MGP_LPJ_P0071122 Ccdc96 protein_coding protein_coding MGP_LPJ_T0001666.1 MGP_LPJ_G0001579.1 mouse_genomes_project 5 65842007 65843559 - TEC TEC MGP_LPJ_T0070674.1 MGP_LPJ_G0029321.1 mouse_genomes_project 5 29697842 29699349 + Krtcap3 protein_coding retained_intron MGP_LPJ_T0070675.1 MGP_LPJ_G0029321.1 mouse_genomes_project 5 29697857 29699349 + MGP_LPJ_P0070675 Krtcap3 protein_coding protein_coding MGP_LPJ_T0070676.1 MGP_LPJ_G0029321.1 mouse_genomes_project 5 29697867 29699043 + Krtcap3 protein_coding retained_intron MGP_LPJ_T0070677.1 MGP_LPJ_G0029321.1 mouse_genomes_project 5 29697873 29699354 + MGP_LPJ_P0070677 Krtcap3 protein_coding protein_coding MGP_LPJ_T0070678.1 MGP_LPJ_G0029321.1 mouse_genomes_project 5 29697876 29699349 + MGP_LPJ_P0070678 Krtcap3 protein_coding protein_coding MGP_LPJ_T0070679.1 MGP_LPJ_G0029321.1 mouse_genomes_project 5 29697913 29698850 + Krtcap3 protein_coding retained_intron MGP_LPJ_T0070680.1 MGP_LPJ_G0029321.1 mouse_genomes_project 5 29698078 29699148 + Krtcap3 protein_coding retained_intron MGP_LPJ_T0070681.1 MGP_LPJ_G0029321.1 mouse_genomes_project 5 29698487 29699351 + Krtcap3 protein_coding retained_intron MGP_LPJ_T0070682.1 MGP_LPJ_G0029321.1 mouse_genomes_project 5 29698631 29699349 + Krtcap3 protein_coding retained_intron MGP_LPJ_T0070683.1 MGP_LPJ_G0029321.1 mouse_genomes_project 5 29698706 29699349 + Krtcap3 protein_coding retained_intron MGP_LPJ_T0008159.1 MGP_LPJ_G0006652.1 mouse_genomes_project 5 64406665 64409926 + Gm43838 lincRNA lincRNA MGP_LPJ_T0073900.1 MGP_LPJ_G0029947.1 mouse_genomes_project 5 126407260 126434959 - MGP_LPJ_P0073900 Tctn1 protein_coding protein_coding MGP_LPJ_T0073901.1 MGP_LPJ_G0029947.1 mouse_genomes_project 5 126410601 126434959 - MGP_LPJ_P0073901 Tctn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0073902.1 MGP_LPJ_G0029947.1 mouse_genomes_project 5 126411006 126434868 - MGP_LPJ_P0073902 Tctn1 protein_coding unknown_likely_coding MGP_LPJ_T0073903.1 MGP_LPJ_G0029947.1 mouse_genomes_project 5 126414885 126421044 - Tctn1 protein_coding processed_transcript MGP_LPJ_T0073904.1 MGP_LPJ_G0029947.1 mouse_genomes_project 5 126417754 126425065 - Tctn1 protein_coding retained_intron MGP_LPJ_T0073905.1 MGP_LPJ_G0029947.1 mouse_genomes_project 5 126421689 126434914 - Tctn1 protein_coding retained_intron MGP_LPJ_T0018130.1 MGP_LPJ_G0015527.1 mouse_genomes_project 5 127202807 127226818 - Gm44574 processed_transcript processed_transcript MGP_LPJ_T0001732.1 MGP_LPJ_G0001644.1 mouse_genomes_project 5 82219674 82223119 + TEC TEC MGP_LPJ_T0014904.1 MGP_LPJ_G0012995.1 mouse_genomes_project 5 38242644 38243101 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099563.1 MGP_LPJ_G0037826.1 mouse_genomes_project 5 30677365 30677472 + Gm26335 snRNA snRNA MGP_LPJ_T0001492.1 MGP_LPJ_G0001409.1 mouse_genomes_project 5 12480096 12481759 + TEC TEC MGP_LPJ_T0004709.1 MGP_LPJ_G0004076.1 mouse_genomes_project 5 43331927 43349137 + Gm42984 antisense antisense MGP_LPJ_T0070558.1 MGP_LPJ_G0029305.1 mouse_genomes_project 5 29466625 29478585 - MGP_LPJ_P0070558 Slc5a6 protein_coding protein_coding MGP_LPJ_T0070559.1 MGP_LPJ_G0029305.1 mouse_genomes_project 5 29466625 29479507 - MGP_LPJ_P0070559 Slc5a6 protein_coding protein_coding MGP_LPJ_T0070560.1 MGP_LPJ_G0029305.1 mouse_genomes_project 5 29466625 29479145 - MGP_LPJ_P0070560 Slc5a6 protein_coding protein_coding MGP_LPJ_T0070561.1 MGP_LPJ_G0029305.1 mouse_genomes_project 5 29466626 29478592 - MGP_LPJ_P0070561 Slc5a6 protein_coding protein_coding MGP_LPJ_T0070562.1 MGP_LPJ_G0029305.1 mouse_genomes_project 5 29467472 29468579 - Slc5a6 protein_coding retained_intron MGP_LPJ_T0070563.1 MGP_LPJ_G0029305.1 mouse_genomes_project 5 29469936 29473188 - MGP_LPJ_P0070563 Slc5a6 protein_coding protein_coding MGP_LPJ_T0070564.1 MGP_LPJ_G0029305.1 mouse_genomes_project 5 29473677 29478662 - MGP_LPJ_P0070564 Slc5a6 protein_coding protein_coding MGP_LPJ_T0071769.1 MGP_LPJ_G0029497.1 mouse_genomes_project 5 67895159 68131041 - MGP_LPJ_P0071769 Atp8a1 protein_coding protein_coding MGP_LPJ_T0071770.1 MGP_LPJ_G0029497.1 mouse_genomes_project 5 67895159 68130977 - MGP_LPJ_P0071770 Atp8a1 protein_coding protein_coding MGP_LPJ_T0071771.1 MGP_LPJ_G0029497.1 mouse_genomes_project 5 67896182 68131038 - MGP_LPJ_P0071771 Atp8a1 protein_coding protein_coding MGP_LPJ_T0071772.1 MGP_LPJ_G0029497.1 mouse_genomes_project 5 67897598 68130902 - MGP_LPJ_P0071772 Atp8a1 protein_coding nonsense_mediated_decay MGP_LPJ_T0071773.1 MGP_LPJ_G0029497.1 mouse_genomes_project 5 67899699 67937502 - Atp8a1 protein_coding processed_transcript MGP_LPJ_T0071774.1 MGP_LPJ_G0029497.1 mouse_genomes_project 5 67960479 68057381 - Atp8a1 protein_coding retained_intron MGP_LPJ_T0071775.1 MGP_LPJ_G0029497.1 mouse_genomes_project 5 68047256 68049739 - Atp8a1 protein_coding retained_intron MGP_LPJ_T0071776.1 MGP_LPJ_G0029497.1 mouse_genomes_project 5 68056789 68098973 - Atp8a1 protein_coding processed_transcript MGP_LPJ_T0071777.1 MGP_LPJ_G0029497.1 mouse_genomes_project 5 68061500 68131038 - MGP_LPJ_P0071777 Atp8a1 protein_coding protein_coding MGP_LPJ_T0071778.1 MGP_LPJ_G0029497.1 mouse_genomes_project 5 68068597 68131036 - Atp8a1 protein_coding retained_intron MGP_LPJ_T0071779.1 MGP_LPJ_G0029497.1 mouse_genomes_project 5 68087945 68091305 - Atp8a1 protein_coding retained_intron MGP_LPJ_T0071780.1 MGP_LPJ_G0029497.1 mouse_genomes_project 5 68095910 68098982 - Atp8a1 protein_coding retained_intron MGP_LPJ_T0071781.1 MGP_LPJ_G0029497.1 mouse_genomes_project 5 68095914 68099596 - MGP_LPJ_P0071781 Atp8a1 protein_coding protein_coding MGP_LPJ_T0075095.1 MGP_LPJ_G0030153.1 mouse_genomes_project 5 143194131 143222980 - MGP_LPJ_P0075095 Cyp3a13 protein_coding protein_coding MGP_LPJ_T0001591.1 MGP_LPJ_G0001505.1 mouse_genomes_project 5 48099772 48101774 - TEC TEC MGP_LPJ_T0071600.1 MGP_LPJ_G0029474.1 mouse_genomes_project 5 65381065 65459114 - MGP_LPJ_P0071600 Rfc1 protein_coding protein_coding MGP_LPJ_T0071601.1 MGP_LPJ_G0029474.1 mouse_genomes_project 5 65381067 65459171 - MGP_LPJ_P0071601 Rfc1 protein_coding protein_coding MGP_LPJ_T0071602.1 MGP_LPJ_G0029474.1 mouse_genomes_project 5 65381067 65459220 - MGP_LPJ_P0071602 Rfc1 protein_coding protein_coding MGP_LPJ_T0071603.1 MGP_LPJ_G0029474.1 mouse_genomes_project 5 65381817 65459168 - MGP_LPJ_P0071603 Rfc1 protein_coding protein_coding MGP_LPJ_T0071604.1 MGP_LPJ_G0029474.1 mouse_genomes_project 5 65382291 65388262 - MGP_LPJ_P0071604 Rfc1 protein_coding protein_coding MGP_LPJ_T0071605.1 MGP_LPJ_G0029474.1 mouse_genomes_project 5 65383461 65392782 - Rfc1 protein_coding retained_intron MGP_LPJ_T0071606.1 MGP_LPJ_G0029474.1 mouse_genomes_project 5 65429869 65459163 - Rfc1 protein_coding retained_intron MGP_LPJ_T0069954.1 MGP_LPJ_G0029190.1 mouse_genomes_project 5 5751017 5857747 + MGP_LPJ_P0069954 Abcb1a protein_coding protein_coding MGP_LPJ_T0069955.1 MGP_LPJ_G0029190.1 mouse_genomes_project 5 5751087 5857503 + MGP_LPJ_P0069955 Abcb1a protein_coding unknown_likely_coding MGP_LPJ_T0069956.1 MGP_LPJ_G0029190.1 mouse_genomes_project 5 5816435 5859505 + Abcb1a protein_coding retained_intron MGP_LPJ_T0069957.1 MGP_LPJ_G0029190.1 mouse_genomes_project 5 5816465 5819791 + Abcb1a protein_coding processed_transcript MGP_LPJ_T0071009.1 MGP_LPJ_G0029369.1 mouse_genomes_project 5 33304258 33326574 - MGP_LPJ_P0071009 Nop14 protein_coding protein_coding MGP_LPJ_T0071010.1 MGP_LPJ_G0029369.1 mouse_genomes_project 5 33307049 33314026 - MGP_LPJ_P0071010 Nop14 protein_coding protein_coding MGP_LPJ_T0071011.1 MGP_LPJ_G0029369.1 mouse_genomes_project 5 33309346 33315290 - Nop14 protein_coding retained_intron MGP_LPJ_T0072704.1 MGP_LPJ_G0029702.1 mouse_genomes_project 5 105820717 105844370 - MGP_LPJ_P0072704 Slc10a6 protein_coding protein_coding MGP_LPJ_T0072202.1 MGP_LPJ_G0029582.1 mouse_genomes_project 5 88649436 88667170 - MGP_LPJ_P0072202 Ugt2a3 protein_coding protein_coding MGP_LPJ_T0008298.1 MGP_LPJ_G0006753.1 mouse_genomes_project 5 114679308 114679977 + Gm42489 lincRNA lincRNA MGP_LPJ_T0004719.1 MGP_LPJ_G0004083.1 mouse_genomes_project 5 51980826 51982075 + Gm43685 antisense antisense MGP_LPJ_T0001802.1 MGP_LPJ_G0001714.1 mouse_genomes_project 5 118432506 118433821 + TEC TEC MGP_LPJ_T0008457.1 MGP_LPJ_G0006860.1 mouse_genomes_project 5 154127151 154130817 + Gm43156 lincRNA lincRNA MGP_LPJ_T0001584.1 MGP_LPJ_G0001498.1 mouse_genomes_project 5 47546407 47548161 + TEC TEC MGP_LPJ_T0072765.1 MGP_LPJ_G0029725.1 mouse_genomes_project 5 107920823 107995205 + MGP_LPJ_P0072765 Lrrc8b protein_coding protein_coding MGP_LPJ_T0073189.1 MGP_LPJ_G0029811.1 mouse_genomes_project 5 115596677 115598990 + MGP_LPJ_P0073189 Gm6588 protein_coding protein_coding MGP_LPJ_T0070311.1 MGP_LPJ_G0029254.1 mouse_genomes_project 5 22917433 22917755 - protein_coding processed_transcript MGP_LPJ_T0070312.1 MGP_LPJ_G0029254.1 mouse_genomes_project 5 22917433 22924522 - MGP_LPJ_P0070312 protein_coding protein_coding MGP_LPJ_T0010727.1 MGP_LPJ_G0008845.1 mouse_genomes_project 5 118058907 118058971 + Mir7028 miRNA miRNA MGP_LPJ_T0073431.1 MGP_LPJ_G0029858.1 mouse_genomes_project 5 118511636 118524110 - Acads protein_coding retained_intron MGP_LPJ_T0073432.1 MGP_LPJ_G0029858.1 mouse_genomes_project 5 118511636 118524169 - MGP_LPJ_P0073432 Acads protein_coding protein_coding MGP_LPJ_T0073433.1 MGP_LPJ_G0029858.1 mouse_genomes_project 5 118513333 118524133 - Acads protein_coding processed_transcript MGP_LPJ_T0073434.1 MGP_LPJ_G0029858.1 mouse_genomes_project 5 118514121 118524098 - Acads protein_coding retained_intron MGP_LPJ_T0001531.1 MGP_LPJ_G0001445.1 mouse_genomes_project 5 31255454 31256305 - TEC TEC MGP_LPJ_T0015066.1 MGP_LPJ_G0013157.1 mouse_genomes_project 5 110889259 110889735 - processed_pseudogene processed_pseudogene MGP_LPJ_T0073160.1 MGP_LPJ_G0029805.1 mouse_genomes_project 5 115470434 115482097 + MGP_LPJ_P0073160 Tfip11 protein_coding protein_coding MGP_LPJ_T0073161.1 MGP_LPJ_G0029805.1 mouse_genomes_project 5 115470497 115475982 + MGP_LPJ_P0073161 Tfip11 protein_coding protein_coding MGP_LPJ_T0073162.1 MGP_LPJ_G0029805.1 mouse_genomes_project 5 115470568 115472260 + MGP_LPJ_P0073162 Tfip11 protein_coding protein_coding MGP_LPJ_T0073163.1 MGP_LPJ_G0029805.1 mouse_genomes_project 5 115479665 115481297 + Tfip11 protein_coding retained_intron MGP_LPJ_T0008142.1 MGP_LPJ_G0006636.1 mouse_genomes_project 5 45129490 45135082 - 4930405L22Rik lincRNA lincRNA MGP_LPJ_T0073765.1 MGP_LPJ_G0029927.1 mouse_genomes_project 5 125371451 125372858 - Trafd1 protein_coding retained_intron MGP_LPJ_T0073766.1 MGP_LPJ_G0029927.1 mouse_genomes_project 5 125371451 125378405 - MGP_LPJ_P0073766 Trafd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0073767.1 MGP_LPJ_G0029927.1 mouse_genomes_project 5 125371451 125385209 - MGP_LPJ_P0073767 Trafd1 protein_coding protein_coding MGP_LPJ_T0073768.1 MGP_LPJ_G0029927.1 mouse_genomes_project 5 125371456 125385148 - MGP_LPJ_P0073768 Trafd1 protein_coding protein_coding MGP_LPJ_T0073769.1 MGP_LPJ_G0029927.1 mouse_genomes_project 5 125371458 125373201 - MGP_LPJ_P0073769 Trafd1 protein_coding protein_coding MGP_LPJ_T0073770.1 MGP_LPJ_G0029927.1 mouse_genomes_project 5 125378212 125385000 - MGP_LPJ_P0073770 Trafd1 protein_coding protein_coding MGP_LPJ_T0073771.1 MGP_LPJ_G0029927.1 mouse_genomes_project 5 125378458 125385154 - MGP_LPJ_P0073771 Trafd1 protein_coding protein_coding MGP_LPJ_T0073772.1 MGP_LPJ_G0029927.1 mouse_genomes_project 5 125379177 125385206 - MGP_LPJ_P0073772 Trafd1 protein_coding protein_coding MGP_LPJ_T0073773.1 MGP_LPJ_G0029927.1 mouse_genomes_project 5 125383745 125384951 - Trafd1 protein_coding processed_transcript MGP_LPJ_T0072937.1 MGP_LPJ_G0029758.1 mouse_genomes_project 5 111219960 111254161 - MGP_LPJ_P0072937 Cplx1 protein_coding protein_coding MGP_LPJ_T0072938.1 MGP_LPJ_G0029758.1 mouse_genomes_project 5 111221665 111254137 - MGP_LPJ_P0072938 Cplx1 protein_coding protein_coding MGP_LPJ_T0008223.1 MGP_LPJ_G0006704.1 mouse_genomes_project 5 98841737 98856656 + Gm8013 lincRNA lincRNA MGP_LPJ_T0072361.1 MGP_LPJ_G0029630.1 mouse_genomes_project 5 92255618 92260707 + Cxcl3 protein_coding retained_intron MGP_LPJ_T0072362.1 MGP_LPJ_G0029630.1 mouse_genomes_project 5 92255618 92259204 + MGP_LPJ_P0072362 Cxcl3 protein_coding protein_coding MGP_LPJ_T0099623.1 MGP_LPJ_G0037886.1 mouse_genomes_project 5 140900866 140900973 + Gm22450 snRNA snRNA MGP_LPJ_T0099589.1 MGP_LPJ_G0037852.1 mouse_genomes_project 5 81817077 81817180 + Gm22974 snRNA snRNA MGP_LPJ_T0008181.1 MGP_LPJ_G0006668.1 mouse_genomes_project 5 74585093 74587425 + Dancr lincRNA lincRNA MGP_LPJ_T0008182.1 MGP_LPJ_G0006668.1 mouse_genomes_project 5 74585093 74587424 + Dancr lincRNA lincRNA MGP_LPJ_T0014958.1 MGP_LPJ_G0013049.1 mouse_genomes_project 5 64226340 64227298 - processed_pseudogene processed_pseudogene MGP_LPJ_T0075046.1 MGP_LPJ_G0030142.1 mouse_genomes_project 5 142890684 142892218 + MGP_LPJ_P0075046 Sap25 protein_coding protein_coding MGP_LPJ_T0075047.1 MGP_LPJ_G0030142.1 mouse_genomes_project 5 142890787 142892252 + MGP_LPJ_P0075047 Sap25 protein_coding protein_coding MGP_LPJ_T0075048.1 MGP_LPJ_G0030142.1 mouse_genomes_project 5 142890845 142891691 + Sap25 protein_coding retained_intron MGP_LPJ_T0075049.1 MGP_LPJ_G0030142.1 mouse_genomes_project 5 142891293 142891897 + Sap25 protein_coding retained_intron MGP_LPJ_T0075050.1 MGP_LPJ_G0030142.1 mouse_genomes_project 5 142891527 142892187 + Sap25 protein_coding retained_intron MGP_LPJ_T0075051.1 MGP_LPJ_G0030142.1 mouse_genomes_project 5 142891698 142892249 + Sap25 protein_coding retained_intron MGP_LPJ_T0073435.1 MGP_LPJ_G0029859.1 mouse_genomes_project 5 118529779 118540972 - MGP_LPJ_P0073435 Unc119b protein_coding protein_coding MGP_LPJ_T0073436.1 MGP_LPJ_G0029859.1 mouse_genomes_project 5 118530964 118533512 - Unc119b protein_coding retained_intron MGP_LPJ_T0073437.1 MGP_LPJ_G0029859.1 mouse_genomes_project 5 118535621 118540922 - Unc119b protein_coding retained_intron MGP_LPJ_T0071204.1 MGP_LPJ_G0029404.1 mouse_genomes_project 5 36658511 36662600 - MGP_LPJ_P0071204 Msx1 protein_coding protein_coding MGP_LPJ_T0071205.1 MGP_LPJ_G0029404.1 mouse_genomes_project 5 36660719 36662599 - Msx1 protein_coding retained_intron MGP_LPJ_T0015092.1 MGP_LPJ_G0013183.1 mouse_genomes_project 5 118939345 118939846 - processed_pseudogene processed_pseudogene MGP_LPJ_T0071108.1 MGP_LPJ_G0029385.1 mouse_genomes_project 5 34620483 34753388 + MGP_LPJ_P0071108 Afap1 protein_coding protein_coding MGP_LPJ_T0071109.1 MGP_LPJ_G0029385.1 mouse_genomes_project 5 34620629 34637418 + Afap1 protein_coding processed_transcript MGP_LPJ_T0071110.1 MGP_LPJ_G0029385.1 mouse_genomes_project 5 34644806 34745489 + MGP_LPJ_P0071110 Afap1 protein_coding protein_coding MGP_LPJ_T0071111.1 MGP_LPJ_G0029385.1 mouse_genomes_project 5 34673827 34749190 + MGP_LPJ_P0071111 Afap1 protein_coding unknown_likely_coding MGP_LPJ_T0071112.1 MGP_LPJ_G0029385.1 mouse_genomes_project 5 34733777 34737997 + Afap1 protein_coding retained_intron MGP_LPJ_T0001466.1 MGP_LPJ_G0001383.1 mouse_genomes_project 5 2701415 2703353 + TEC TEC MGP_LPJ_T0008241.1 MGP_LPJ_G0006718.1 mouse_genomes_project 5 102281712 102289073 + 2310034O05Rik lincRNA lincRNA MGP_LPJ_T0008242.1 MGP_LPJ_G0006718.1 mouse_genomes_project 5 102281728 102287765 + 2310034O05Rik lincRNA lincRNA MGP_LPJ_T0001478.1 MGP_LPJ_G0001395.1 mouse_genomes_project 5 10027309 10030923 + TEC TEC MGP_LPJ_T0008329.1 MGP_LPJ_G0006770.1 mouse_genomes_project 5 118774346 118778381 + Gm42903 lincRNA lincRNA MGP_LPJ_T0074664.1 MGP_LPJ_G0030070.1 mouse_genomes_project 5 139874395 139876214 - MGP_LPJ_P0074664 Cldn4 protein_coding protein_coding MGP_LPJ_T0014914.1 MGP_LPJ_G0013005.1 mouse_genomes_project 5 43465932 43467825 - processed_pseudogene processed_pseudogene MGP_LPJ_T0070814.1 MGP_LPJ_G0029340.1 mouse_genomes_project 5 31588678 31590859 + protein_coding retained_intron MGP_LPJ_T0014887.1 MGP_LPJ_G0012978.1 mouse_genomes_project 5 31625223 31625438 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001803.1 MGP_LPJ_G0001715.1 mouse_genomes_project 5 118854021 118855922 - TEC TEC MGP_LPJ_T0014903.1 MGP_LPJ_G0012994.1 mouse_genomes_project 5 37448868 37449267 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008418.1 MGP_LPJ_G0006827.1 mouse_genomes_project 5 136146536 136169617 - Gm42590 lincRNA lincRNA MGP_LPJ_T0073473.1 MGP_LPJ_G0029866.1 mouse_genomes_project 5 118751295 118758340 + MGP_LPJ_P0073473 Srsf9 protein_coding protein_coding MGP_LPJ_T0073474.1 MGP_LPJ_G0029866.1 mouse_genomes_project 5 118752912 118758269 + Srsf9 protein_coding processed_transcript MGP_LPJ_T0073475.1 MGP_LPJ_G0029866.1 mouse_genomes_project 5 118753899 118757910 + Srsf9 protein_coding processed_transcript MGP_LPJ_T0073476.1 MGP_LPJ_G0029866.1 mouse_genomes_project 5 118755837 118758269 + MGP_LPJ_P0073476 Srsf9 protein_coding protein_coding MGP_LPJ_T0001898.1 MGP_LPJ_G0001809.1 mouse_genomes_project 5 137340691 137341515 - TEC TEC MGP_LPJ_T0074711.1 MGP_LPJ_G0030079.1 mouse_genomes_project 5 140116119 140130386 + MGP_LPJ_P0074711 Bcl7b protein_coding protein_coding MGP_LPJ_T0074712.1 MGP_LPJ_G0030079.1 mouse_genomes_project 5 140116225 140121285 + MGP_LPJ_P0074712 Bcl7b protein_coding protein_coding MGP_LPJ_T0074713.1 MGP_LPJ_G0030079.1 mouse_genomes_project 5 140116248 140130362 + MGP_LPJ_P0074713 Bcl7b protein_coding protein_coding MGP_LPJ_T0074714.1 MGP_LPJ_G0030079.1 mouse_genomes_project 5 140116281 140129126 + MGP_LPJ_P0074714 Bcl7b protein_coding protein_coding MGP_LPJ_T0074715.1 MGP_LPJ_G0030079.1 mouse_genomes_project 5 140128112 140129656 + Bcl7b protein_coding retained_intron MGP_LPJ_T0074672.1 MGP_LPJ_G0030073.1 mouse_genomes_project 5 139962175 139992948 + MGP_LPJ_P0074672 Stx1a protein_coding protein_coding MGP_LPJ_T0074673.1 MGP_LPJ_G0030073.1 mouse_genomes_project 5 139962200 139987612 + MGP_LPJ_P0074673 Stx1a protein_coding protein_coding MGP_LPJ_T0074674.1 MGP_LPJ_G0030073.1 mouse_genomes_project 5 139962253 139992948 + MGP_LPJ_P0074674 Stx1a protein_coding nonsense_mediated_decay MGP_LPJ_T0074675.1 MGP_LPJ_G0030073.1 mouse_genomes_project 5 139977500 139990757 + Stx1a protein_coding processed_transcript MGP_LPJ_T0074676.1 MGP_LPJ_G0030073.1 mouse_genomes_project 5 139981049 139992947 + Stx1a protein_coding retained_intron MGP_LPJ_T0074677.1 MGP_LPJ_G0030073.1 mouse_genomes_project 5 139981255 139990866 + Stx1a protein_coding processed_transcript MGP_LPJ_T0011628.1 MGP_LPJ_G0009746.1 mouse_genomes_project 5 144893338 144893615 + Gm27316 misc_RNA misc_RNA MGP_LPJ_T0008188.1 MGP_LPJ_G0006674.1 mouse_genomes_project 5 76307835 76315781 + Gm43101 lincRNA lincRNA MGP_LPJ_T0008189.1 MGP_LPJ_G0006674.1 mouse_genomes_project 5 76314644 76315782 + Gm43101 lincRNA lincRNA MGP_LPJ_T0014986.1 MGP_LPJ_G0013077.1 mouse_genomes_project 5 75907079 75908469 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008214.1 MGP_LPJ_G0006695.1 mouse_genomes_project 5 92732891 92758786 - Gm19619 lincRNA lincRNA MGP_LPJ_T0071671.1 MGP_LPJ_G0029485.1 mouse_genomes_project 5 66122914 66159973 + MGP_LPJ_P0071671 Chrna9 protein_coding protein_coding MGP_LPJ_T0071672.1 MGP_LPJ_G0029485.1 mouse_genomes_project 5 66122921 66162051 + MGP_LPJ_P0071672 Chrna9 protein_coding protein_coding MGP_LPJ_T0071673.1 MGP_LPJ_G0029485.1 mouse_genomes_project 5 66122941 66123908 + Chrna9 protein_coding retained_intron MGP_LPJ_T0071674.1 MGP_LPJ_G0029485.1 mouse_genomes_project 5 66122966 66134288 + Chrna9 protein_coding processed_transcript MGP_LPJ_T0071675.1 MGP_LPJ_G0029485.1 mouse_genomes_project 5 66122968 66134304 + Chrna9 protein_coding processed_transcript MGP_LPJ_T0071676.1 MGP_LPJ_G0029485.1 mouse_genomes_project 5 66157936 66169099 + MGP_LPJ_P0071676 Chrna9 protein_coding protein_coding MGP_LPJ_T0071677.1 MGP_LPJ_G0029485.1 mouse_genomes_project 5 66167668 66168913 + Chrna9 protein_coding processed_transcript MGP_LPJ_T0014912.1 MGP_LPJ_G0013003.1 mouse_genomes_project 5 43019292 43020795 + processed_pseudogene processed_pseudogene MGP_LPJ_T0071825.1 MGP_LPJ_G0029510.1 mouse_genomes_project 5 72545221 72556840 - MGP_LPJ_P0071825 Commd8 protein_coding protein_coding MGP_LPJ_T0071826.1 MGP_LPJ_G0029510.1 mouse_genomes_project 5 72545831 72556815 - MGP_LPJ_P0071826 Commd8 protein_coding nonsense_mediated_decay MGP_LPJ_T0071827.1 MGP_LPJ_G0029510.1 mouse_genomes_project 5 72547657 72549785 - Commd8 protein_coding retained_intron MGP_LPJ_T0071828.1 MGP_LPJ_G0029510.1 mouse_genomes_project 5 72548522 72554371 - Commd8 protein_coding processed_transcript MGP_LPJ_T0071829.1 MGP_LPJ_G0029510.1 mouse_genomes_project 5 72549608 72556807 - MGP_LPJ_P0071829 Commd8 protein_coding protein_coding MGP_LPJ_T0073217.1 MGP_LPJ_G0029816.1 mouse_genomes_project 5 116281556 116367267 - MGP_LPJ_P0073217 2900026A02Rik protein_coding protein_coding MGP_LPJ_T0073218.1 MGP_LPJ_G0029816.1 mouse_genomes_project 5 116287649 116338703 - MGP_LPJ_P0073218 2900026A02Rik protein_coding unknown_likely_coding MGP_LPJ_T0074895.1 MGP_LPJ_G0030113.1 mouse_genomes_project 5 142042357 142049096 + MGP_LPJ_P0074895 Ift22 protein_coding protein_coding MGP_LPJ_T0074896.1 MGP_LPJ_G0030113.1 mouse_genomes_project 5 142042361 142048246 + MGP_LPJ_P0074896 Ift22 protein_coding protein_coding MGP_LPJ_T0074897.1 MGP_LPJ_G0030113.1 mouse_genomes_project 5 142042391 142049097 + MGP_LPJ_P0074897 Ift22 protein_coding protein_coding MGP_LPJ_T0074898.1 MGP_LPJ_G0030113.1 mouse_genomes_project 5 142046903 142047477 + Ift22 protein_coding retained_intron MGP_LPJ_T0074348.1 MGP_LPJ_G0030018.1 mouse_genomes_project 5 131704068 132042368 + MGP_LPJ_P0074348 Tmem132c protein_coding protein_coding MGP_LPJ_T0074349.1 MGP_LPJ_G0030018.1 mouse_genomes_project 5 131704086 131747433 + Tmem132c protein_coding processed_transcript MGP_LPJ_T0074350.1 MGP_LPJ_G0030018.1 mouse_genomes_project 5 132028107 132041442 + Tmem132c protein_coding processed_transcript MGP_LPJ_T0074351.1 MGP_LPJ_G0030018.1 mouse_genomes_project 5 132029858 132041062 + MGP_LPJ_P0074351 Tmem132c protein_coding protein_coding MGP_LPJ_T0099578.1 MGP_LPJ_G0037841.1 mouse_genomes_project 5 69696970 69697077 - Gm23932 snRNA snRNA MGP_LPJ_T0075505.1 MGP_LPJ_G0030239.1 mouse_genomes_project 5 149677284 149699219 - MGP_LPJ_P0075505 Usp42 protein_coding protein_coding MGP_LPJ_T0075506.1 MGP_LPJ_G0030239.1 mouse_genomes_project 5 149680711 149682571 - Usp42 protein_coding processed_transcript MGP_LPJ_T0075507.1 MGP_LPJ_G0030239.1 mouse_genomes_project 5 149680726 149684164 - Usp42 protein_coding retained_intron MGP_LPJ_T0075508.1 MGP_LPJ_G0030239.1 mouse_genomes_project 5 149683380 149695478 - Usp42 protein_coding retained_intron MGP_LPJ_T0075509.1 MGP_LPJ_G0030239.1 mouse_genomes_project 5 149688625 149689918 - Usp42 protein_coding retained_intron MGP_LPJ_T0008137.1 MGP_LPJ_G0006632.1 mouse_genomes_project 5 44020000 44031807 + Gm42750 lincRNA lincRNA MGP_LPJ_T0075389.1 MGP_LPJ_G0030215.1 mouse_genomes_project 5 148341173 148409318 - MGP_LPJ_P0075389 Radil protein_coding protein_coding MGP_LPJ_T0075390.1 MGP_LPJ_G0030215.1 mouse_genomes_project 5 148341178 148409331 - Radil protein_coding retained_intron MGP_LPJ_T0075391.1 MGP_LPJ_G0030215.1 mouse_genomes_project 5 148341178 148403434 - MGP_LPJ_P0075391 Radil protein_coding protein_coding MGP_LPJ_T0075392.1 MGP_LPJ_G0030215.1 mouse_genomes_project 5 148341215 148409346 - MGP_LPJ_P0075392 Radil protein_coding protein_coding MGP_LPJ_T0075393.1 MGP_LPJ_G0030215.1 mouse_genomes_project 5 148342819 148343906 - Radil protein_coding retained_intron MGP_LPJ_T0075394.1 MGP_LPJ_G0030215.1 mouse_genomes_project 5 148364447 148365822 - MGP_LPJ_P0075394 Radil protein_coding protein_coding MGP_LPJ_T0075396.1 MGP_LPJ_G0030215.1 mouse_genomes_project 5 148402028 148409234 - MGP_LPJ_P0075396 Radil protein_coding protein_coding MGP_LPJ_T0072363.1 MGP_LPJ_G0029631.1 mouse_genomes_project 5 92265636 92275608 + MGP_LPJ_P0072363 Cxcl15 protein_coding protein_coding MGP_LPJ_T0074411.1 MGP_LPJ_G0030029.1 mouse_genomes_project 5 134200757 134227391 + MGP_LPJ_P0074411 Mmp17 protein_coding protein_coding MGP_LPJ_T0074412.1 MGP_LPJ_G0030029.1 mouse_genomes_project 5 134212913 134218778 + Mmp17 protein_coding retained_intron MGP_LPJ_T0072510.1 MGP_LPJ_G0029663.1 mouse_genomes_project 5 97846247 97850366 + MGP_LPJ_P0072510 Cxcl13 protein_coding protein_coding MGP_LPJ_T0072640.1 MGP_LPJ_G0029692.1 mouse_genomes_project 5 102885463 102921900 - MGP_LPJ_P0072640 Helq protein_coding protein_coding MGP_LPJ_T0072641.1 MGP_LPJ_G0029692.1 mouse_genomes_project 5 102885469 102888757 - Helq protein_coding retained_intron MGP_LPJ_T0072642.1 MGP_LPJ_G0029692.1 mouse_genomes_project 5 102885765 102921770 - MGP_LPJ_P0072642 Helq protein_coding protein_coding MGP_LPJ_T0072643.1 MGP_LPJ_G0029692.1 mouse_genomes_project 5 102885774 102890132 - Helq protein_coding retained_intron MGP_LPJ_T0072644.1 MGP_LPJ_G0029692.1 mouse_genomes_project 5 102890055 102897351 - MGP_LPJ_P0072644 Helq protein_coding nonsense_mediated_decay MGP_LPJ_T0072645.1 MGP_LPJ_G0029692.1 mouse_genomes_project 5 102894866 102897435 - Helq protein_coding retained_intron MGP_LPJ_T0072646.1 MGP_LPJ_G0029692.1 mouse_genomes_project 5 102901699 102906292 - Helq protein_coding retained_intron MGP_LPJ_T0072647.1 MGP_LPJ_G0029692.1 mouse_genomes_project 5 102906390 102916029 - Helq protein_coding processed_transcript MGP_LPJ_T0072648.1 MGP_LPJ_G0029692.1 mouse_genomes_project 5 102906471 102921879 - MGP_LPJ_P0072648 Helq protein_coding nonsense_mediated_decay MGP_LPJ_T0072649.1 MGP_LPJ_G0029692.1 mouse_genomes_project 5 102915074 102916355 - Helq protein_coding retained_intron MGP_LPJ_T0073360.1 MGP_LPJ_G0029844.1 mouse_genomes_project 5 118002235 118024285 - MGP_LPJ_P0073360 Gltp protein_coding protein_coding MGP_LPJ_T0073361.1 MGP_LPJ_G0029844.1 mouse_genomes_project 5 118002919 118024242 - MGP_LPJ_P0073361 Gltp protein_coding protein_coding MGP_LPJ_T0073362.1 MGP_LPJ_G0029844.1 mouse_genomes_project 5 118003064 118024209 - MGP_LPJ_P0073362 Gltp protein_coding protein_coding MGP_LPJ_T0001723.1 MGP_LPJ_G0001635.1 mouse_genomes_project 5 74883788 74886539 - TEC TEC MGP_LPJ_T0008099.1 MGP_LPJ_G0006607.1 mouse_genomes_project 5 30912663 30920563 - Gm7596 lincRNA lincRNA MGP_LPJ_T0008100.1 MGP_LPJ_G0006607.1 mouse_genomes_project 5 30912689 30915959 - Gm7596 lincRNA lincRNA MGP_LPJ_T0001480.1 MGP_LPJ_G0001397.1 mouse_genomes_project 5 11037750 11041658 + TEC TEC MGP_LPJ_T0008495.1 MGP_LPJ_G0006886.1 mouse_genomes_project 5 157431560 157478636 + Gm43299 lincRNA lincRNA MGP_LPJ_T0075850.1 MGP_LPJ_G0030313.1 mouse_genomes_project 5 156693957 156933412 + MGP_LPJ_P0075850 Fry protein_coding protein_coding MGP_LPJ_T0075851.1 MGP_LPJ_G0030313.1 mouse_genomes_project 5 156693979 156942966 + Fry protein_coding retained_intron MGP_LPJ_T0075852.1 MGP_LPJ_G0030313.1 mouse_genomes_project 5 156693979 156938874 + MGP_LPJ_P0075852 Fry protein_coding protein_coding MGP_LPJ_T0075853.1 MGP_LPJ_G0030313.1 mouse_genomes_project 5 156775688 156933387 + MGP_LPJ_P0075853 Fry protein_coding protein_coding MGP_LPJ_T0075854.1 MGP_LPJ_G0030313.1 mouse_genomes_project 5 156846674 156850836 + Fry protein_coding retained_intron MGP_LPJ_T0075855.1 MGP_LPJ_G0030313.1 mouse_genomes_project 5 156850697 157094256 + MGP_LPJ_P0075855 Fry protein_coding protein_coding MGP_LPJ_T0075856.1 MGP_LPJ_G0030313.1 mouse_genomes_project 5 156886130 156985550 + Fry protein_coding retained_intron MGP_LPJ_T0075857.1 MGP_LPJ_G0030313.1 mouse_genomes_project 5 156995489 156998160 + Fry protein_coding retained_intron MGP_LPJ_T0075858.1 MGP_LPJ_G0030313.1 mouse_genomes_project 5 157005499 157008888 + Fry protein_coding retained_intron MGP_LPJ_T0075859.1 MGP_LPJ_G0030313.1 mouse_genomes_project 5 157024790 157027648 + Fry protein_coding retained_intron MGP_LPJ_T0075860.1 MGP_LPJ_G0030313.1 mouse_genomes_project 5 157032352 157094256 + MGP_LPJ_P0075860 Fry protein_coding protein_coding MGP_LPJ_T0075861.1 MGP_LPJ_G0030313.1 mouse_genomes_project 5 157044910 157094256 + MGP_LPJ_P0075861 Fry protein_coding protein_coding MGP_LPJ_T0075862.1 MGP_LPJ_G0030313.1 mouse_genomes_project 5 157051528 157093401 + Fry protein_coding retained_intron MGP_LPJ_T0075863.1 MGP_LPJ_G0030313.1 mouse_genomes_project 5 157054463 157058147 + Fry protein_coding retained_intron MGP_LPJ_T0075864.1 MGP_LPJ_G0030313.1 mouse_genomes_project 5 157080451 157083069 + Fry protein_coding retained_intron MGP_LPJ_T0075865.1 MGP_LPJ_G0030313.1 mouse_genomes_project 5 157083380 157085257 + Fry protein_coding retained_intron MGP_LPJ_T0075866.1 MGP_LPJ_G0030313.1 mouse_genomes_project 5 157092474 157094138 + Fry protein_coding retained_intron MGP_LPJ_T0008491.1 MGP_LPJ_G0006884.1 mouse_genomes_project 5 157200376 157202855 - Gm43598 lincRNA lincRNA MGP_LPJ_T0100867.1 MGP_LPJ_G0039130.1 mouse_genomes_project 5 155654132 155654230 + Gm23362 snoRNA snoRNA MGP_LPJ_T0001638.1 MGP_LPJ_G0001552.1 mouse_genomes_project 5 57615741 57617096 + TEC TEC MGP_LPJ_T0004884.1 MGP_LPJ_G0004202.1 mouse_genomes_project 5 141154079 141155912 - Gm15701 antisense antisense MGP_LPJ_T0071160.1 MGP_LPJ_G0029397.1 mouse_genomes_project 5 35759573 35784075 - MGP_LPJ_P0071160 Wfs1 protein_coding protein_coding MGP_LPJ_T0071161.1 MGP_LPJ_G0029397.1 mouse_genomes_project 5 35759576 35783803 - MGP_LPJ_P0071161 Wfs1 protein_coding protein_coding MGP_LPJ_T0071162.1 MGP_LPJ_G0029397.1 mouse_genomes_project 5 35761970 35770535 - MGP_LPJ_P0071162 Wfs1 protein_coding nonsense_mediated_decay MGP_LPJ_T0015136.1 MGP_LPJ_G0013227.1 mouse_genomes_project 5 148488763 148488992 - processed_pseudogene processed_pseudogene MGP_LPJ_T0075548.1 MGP_LPJ_G0030249.1 mouse_genomes_project 5 150127396 150131530 + MGP_LPJ_P0075548 Bhlha15 protein_coding protein_coding MGP_LPJ_T0008487.1 MGP_LPJ_G0006881.1 mouse_genomes_project 5 156459155 156460153 - Gm43452 lincRNA lincRNA MGP_LPJ_T0073582.1 MGP_LPJ_G0029885.1 mouse_genomes_project 5 120689539 120860742 + MGP_LPJ_P0073582 Taok3 protein_coding protein_coding MGP_LPJ_T0073583.1 MGP_LPJ_G0029885.1 mouse_genomes_project 5 120695715 120778701 + MGP_LPJ_P0073583 Taok3 protein_coding protein_coding MGP_LPJ_T0073584.1 MGP_LPJ_G0029885.1 mouse_genomes_project 5 120703559 120770771 + Taok3 protein_coding retained_intron MGP_LPJ_T0073585.1 MGP_LPJ_G0029885.1 mouse_genomes_project 5 120703559 120860600 + MGP_LPJ_P0073585 Taok3 protein_coding protein_coding MGP_LPJ_T0073586.1 MGP_LPJ_G0029885.1 mouse_genomes_project 5 120703566 120860744 + MGP_LPJ_P0073586 Taok3 protein_coding protein_coding MGP_LPJ_T0073587.1 MGP_LPJ_G0029885.1 mouse_genomes_project 5 120703586 120818555 + Taok3 protein_coding retained_intron MGP_LPJ_T0073588.1 MGP_LPJ_G0029885.1 mouse_genomes_project 5 120703589 120835465 + MGP_LPJ_P0073588 Taok3 protein_coding protein_coding MGP_LPJ_T0073589.1 MGP_LPJ_G0029885.1 mouse_genomes_project 5 120703612 120762965 + Taok3 protein_coding retained_intron MGP_LPJ_T0073590.1 MGP_LPJ_G0029885.1 mouse_genomes_project 5 120778682 120806103 + MGP_LPJ_P0073590 Taok3 protein_coding protein_coding MGP_LPJ_T0073591.1 MGP_LPJ_G0029885.1 mouse_genomes_project 5 120817566 120859404 + MGP_LPJ_P0073591 Taok3 protein_coding protein_coding MGP_LPJ_T0001753.1 MGP_LPJ_G0001665.1 mouse_genomes_project 5 99956140 99957697 - TEC TEC MGP_LPJ_T0070078.1 MGP_LPJ_G0029210.1 mouse_genomes_project 5 18814857 18819537 + MGP_LPJ_P0070078 Tmem60 protein_coding protein_coding MGP_LPJ_T0070079.1 MGP_LPJ_G0029210.1 mouse_genomes_project 5 18815173 18817351 + Tmem60 protein_coding processed_transcript MGP_LPJ_T0004718.1 MGP_LPJ_G0004082.1 mouse_genomes_project 5 51876585 51880628 + antisense antisense MGP_LPJ_T0075337.1 MGP_LPJ_G0030203.1 mouse_genomes_project 5 146200892 146224340 + MGP_LPJ_P0075337 Chst12 protein_coding protein_coding MGP_LPJ_T0075338.1 MGP_LPJ_G0030203.1 mouse_genomes_project 5 146200917 146223089 + MGP_LPJ_P0075338 Chst12 protein_coding protein_coding MGP_LPJ_T0004853.1 MGP_LPJ_G0004179.1 mouse_genomes_project 5 127660304 127664610 - Gm15747 antisense antisense MGP_LPJ_T0004854.1 MGP_LPJ_G0004179.1 mouse_genomes_project 5 127660315 127661717 - Gm15747 antisense antisense MGP_LPJ_T0074626.1 MGP_LPJ_G0030063.1 mouse_genomes_project 5 139498381 139513591 - MGP_LPJ_P0074626 Lat2 protein_coding protein_coding MGP_LPJ_T0074627.1 MGP_LPJ_G0030063.1 mouse_genomes_project 5 139498462 139513556 - MGP_LPJ_P0074627 Lat2 protein_coding protein_coding MGP_LPJ_T0074628.1 MGP_LPJ_G0030063.1 mouse_genomes_project 5 139498597 139507360 - MGP_LPJ_P0074628 Lat2 protein_coding protein_coding MGP_LPJ_T0074629.1 MGP_LPJ_G0030063.1 mouse_genomes_project 5 139498790 139504712 - MGP_LPJ_P0074629 Lat2 protein_coding protein_coding MGP_LPJ_T0074630.1 MGP_LPJ_G0030063.1 mouse_genomes_project 5 139498928 139504157 - Lat2 protein_coding processed_transcript MGP_LPJ_T0074631.1 MGP_LPJ_G0030063.1 mouse_genomes_project 5 139499157 139513572 - MGP_LPJ_P0074631 Lat2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074632.1 MGP_LPJ_G0030063.1 mouse_genomes_project 5 139499170 139502244 - Lat2 protein_coding retained_intron MGP_LPJ_T0074633.1 MGP_LPJ_G0030063.1 mouse_genomes_project 5 139503117 139513551 - Lat2 protein_coding processed_transcript MGP_LPJ_T0074634.1 MGP_LPJ_G0030063.1 mouse_genomes_project 5 139504286 139513532 - MGP_LPJ_P0074634 Lat2 protein_coding protein_coding MGP_LPJ_T0074635.1 MGP_LPJ_G0030063.1 mouse_genomes_project 5 139504391 139506515 - Lat2 protein_coding retained_intron MGP_LPJ_T0075301.1 MGP_LPJ_G0030193.1 mouse_genomes_project 5 145421918 145434238 + MGP_LPJ_P0075301 Mafk protein_coding protein_coding MGP_LPJ_T0075302.1 MGP_LPJ_G0030193.1 mouse_genomes_project 5 145421939 145431085 + Mafk protein_coding processed_transcript MGP_LPJ_T0075303.1 MGP_LPJ_G0030193.1 mouse_genomes_project 5 145427911 145433916 + MGP_LPJ_P0075303 Mafk protein_coding protein_coding MGP_LPJ_T0001798.1 MGP_LPJ_G0001710.1 mouse_genomes_project 5 117158720 117163217 - TEC TEC MGP_LPJ_T0072087.1 MGP_LPJ_G0029555.1 mouse_genomes_project 5 77743350 77773772 - MGP_LPJ_P0072087 Hopx protein_coding protein_coding MGP_LPJ_T0071300.1 MGP_LPJ_G0029422.1 mouse_genomes_project 5 42582632 42696055 + MGP_LPJ_P0071300 C1qtnf7 protein_coding protein_coding MGP_LPJ_T0071301.1 MGP_LPJ_G0029422.1 mouse_genomes_project 5 42582856 42684796 + MGP_LPJ_P0071301 C1qtnf7 protein_coding protein_coding MGP_LPJ_T0071302.1 MGP_LPJ_G0029422.1 mouse_genomes_project 5 42677445 42693856 + MGP_LPJ_P0071302 C1qtnf7 protein_coding protein_coding MGP_LPJ_T0001548.1 MGP_LPJ_G0001462.1 mouse_genomes_project 5 38522398 38525816 - TEC TEC MGP_LPJ_T0074772.1 MGP_LPJ_G0030093.1 mouse_genomes_project 5 140760298 140797511 - MGP_LPJ_P0074772 Styxl1 protein_coding protein_coding MGP_LPJ_T0074773.1 MGP_LPJ_G0030093.1 mouse_genomes_project 5 140760328 140789480 - MGP_LPJ_P0074773 Styxl1 protein_coding protein_coding MGP_LPJ_T0074774.1 MGP_LPJ_G0030093.1 mouse_genomes_project 5 140774247 140797589 - MGP_LPJ_P0074774 Styxl1 protein_coding protein_coding MGP_LPJ_T0101347.1 MGP_LPJ_G0039552.1 mouse_genomes_project 5 22793842 22797007 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101348.1 MGP_LPJ_G0039552.1 mouse_genomes_project 5 22795830 22796881 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0102194.1 MGP_LPJ_G0040231.1 mouse_genomes_project 5 142141061 142142964 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0070780.1 MGP_LPJ_G0029335.1 mouse_genomes_project 5 30984973 31022200 + MGP_LPJ_P0070780 Ppp1cb protein_coding protein_coding MGP_LPJ_T0070781.1 MGP_LPJ_G0029335.1 mouse_genomes_project 5 30985282 31045034 + MGP_LPJ_P0070781 Ppp1cb protein_coding nonsense_mediated_decay MGP_LPJ_T0070782.1 MGP_LPJ_G0029335.1 mouse_genomes_project 5 30985316 30991282 + Ppp1cb protein_coding retained_intron MGP_LPJ_T0070783.1 MGP_LPJ_G0029335.1 mouse_genomes_project 5 30985352 31017716 + MGP_LPJ_P0070783 Ppp1cb protein_coding protein_coding MGP_LPJ_T0070784.1 MGP_LPJ_G0029335.1 mouse_genomes_project 5 31004982 31011992 + Ppp1cb protein_coding processed_transcript MGP_LPJ_T0070785.1 MGP_LPJ_G0029335.1 mouse_genomes_project 5 31012649 31019437 + MGP_LPJ_P0070785 Ppp1cb protein_coding nonsense_mediated_decay MGP_LPJ_T0071678.1 MGP_LPJ_G0029486.1 mouse_genomes_project 5 66171130 66183315 - 9130230L23Rik protein_coding retained_intron MGP_LPJ_T0071679.1 MGP_LPJ_G0029486.1 mouse_genomes_project 5 66179901 66198998 - MGP_LPJ_P0071679 9130230L23Rik protein_coding protein_coding MGP_LPJ_T0071680.1 MGP_LPJ_G0029486.1 mouse_genomes_project 5 66180248 66193351 - MGP_LPJ_P0071680 9130230L23Rik protein_coding protein_coding MGP_LPJ_T0071681.1 MGP_LPJ_G0029486.1 mouse_genomes_project 5 66182397 66184420 - 9130230L23Rik protein_coding retained_intron MGP_LPJ_T0071682.1 MGP_LPJ_G0029486.1 mouse_genomes_project 5 66183433 66194466 - 9130230L23Rik protein_coding retained_intron MGP_LPJ_T0071683.1 MGP_LPJ_G0029486.1 mouse_genomes_project 5 66192810 66198998 - 9130230L23Rik protein_coding retained_intron MGP_LPJ_T0071684.1 MGP_LPJ_G0029486.1 mouse_genomes_project 5 66194195 66194922 - 9130230L23Rik protein_coding retained_intron MGP_LPJ_T0074546.1 MGP_LPJ_G0030056.1 mouse_genomes_project 5 139036220 139079819 + MGP_LPJ_P0074546 Gtf2ird2 protein_coding nonsense_mediated_decay MGP_LPJ_T0074547.1 MGP_LPJ_G0030056.1 mouse_genomes_project 5 139036252 139073209 + MGP_LPJ_P0074547 Gtf2ird2 protein_coding protein_coding MGP_LPJ_T0074548.1 MGP_LPJ_G0030056.1 mouse_genomes_project 5 139053513 139054141 + Gtf2ird2 protein_coding processed_transcript MGP_LPJ_T0074549.1 MGP_LPJ_G0030056.1 mouse_genomes_project 5 139062153 139071711 + Gtf2ird2 protein_coding retained_intron MGP_LPJ_T0074550.1 MGP_LPJ_G0030056.1 mouse_genomes_project 5 139069605 139072109 + MGP_LPJ_P0074550 Gtf2ird2 protein_coding protein_coding MGP_LPJ_T0004818.1 MGP_LPJ_G0004155.1 mouse_genomes_project 5 119732911 119748470 + Gm14507 antisense antisense MGP_LPJ_T0075905.1 MGP_LPJ_G0030319.1 mouse_genomes_project 5 157573891 157617538 + MGP_LPJ_P0075905 Kl protein_coding protein_coding MGP_LPJ_T0075906.1 MGP_LPJ_G0030319.1 mouse_genomes_project 5 157573988 157609909 + Kl protein_coding retained_intron MGP_LPJ_T0001536.1 MGP_LPJ_G0001450.1 mouse_genomes_project 5 33126656 33130188 + TEC TEC MGP_LPJ_T0004755.1 MGP_LPJ_G0004114.1 mouse_genomes_project 5 91959765 91976544 - Gm43449 antisense antisense MGP_LPJ_T0001678.1 MGP_LPJ_G0001591.1 mouse_genomes_project 5 66540883 66542925 - TEC TEC MGP_LPJ_T0098041.1 MGP_LPJ_G0036322.1 mouse_genomes_project 5 119524124 119524295 - pseudogene pseudogene MGP_LPJ_T0015093.1 MGP_LPJ_G0013184.1 mouse_genomes_project 5 120153959 120156560 - processed_pseudogene processed_pseudogene MGP_LPJ_T0014867.1 MGP_LPJ_G0012958.1 mouse_genomes_project 5 25106212 25106618 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098423.1 MGP_LPJ_G0036704.1 mouse_genomes_project 5 1958031 1958159 - Gm22897 scaRNA scaRNA MGP_LPJ_T0070080.1 MGP_LPJ_G0029211.1 mouse_genomes_project 5 18826628 18890308 - MGP_LPJ_P0070080 Rsbn1l protein_coding protein_coding MGP_LPJ_T0070081.1 MGP_LPJ_G0029211.1 mouse_genomes_project 5 18829191 18894881 - MGP_LPJ_P0070081 Rsbn1l protein_coding protein_coding MGP_LPJ_T0070082.1 MGP_LPJ_G0029211.1 mouse_genomes_project 5 18856535 18858824 - Rsbn1l protein_coding retained_intron MGP_LPJ_T0070083.1 MGP_LPJ_G0029211.1 mouse_genomes_project 5 18856566 18883141 - MGP_LPJ_P0070083 Rsbn1l protein_coding protein_coding MGP_LPJ_T0071373.1 MGP_LPJ_G0029434.1 mouse_genomes_project 5 44711411 44717972 + MGP_LPJ_P0071373 Med28 protein_coding protein_coding MGP_LPJ_T0071374.1 MGP_LPJ_G0029434.1 mouse_genomes_project 5 44711442 44717724 + MGP_LPJ_P0071374 Med28 protein_coding protein_coding MGP_LPJ_T0071375.1 MGP_LPJ_G0029434.1 mouse_genomes_project 5 44712123 44717979 + Med28 protein_coding processed_transcript MGP_LPJ_T0071376.1 MGP_LPJ_G0029434.1 mouse_genomes_project 5 44714503 44717552 + Med28 protein_coding retained_intron MGP_LPJ_T0070573.1 MGP_LPJ_G0029307.1 mouse_genomes_project 5 29485246 29510490 + MGP_LPJ_P0070573 Cad protein_coding protein_coding MGP_LPJ_T0070574.1 MGP_LPJ_G0029307.1 mouse_genomes_project 5 29485277 29499771 + MGP_LPJ_P0070574 Cad protein_coding protein_coding MGP_LPJ_T0070575.1 MGP_LPJ_G0029307.1 mouse_genomes_project 5 29485394 29510243 + MGP_LPJ_P0070575 Cad protein_coding protein_coding MGP_LPJ_T0070576.1 MGP_LPJ_G0029307.1 mouse_genomes_project 5 29485394 29510243 + MGP_LPJ_P0070576 Cad protein_coding protein_coding MGP_LPJ_T0070577.1 MGP_LPJ_G0029307.1 mouse_genomes_project 5 29485421 29510206 + MGP_LPJ_P0070577 Cad protein_coding protein_coding MGP_LPJ_T0070578.1 MGP_LPJ_G0029307.1 mouse_genomes_project 5 29489082 29490373 + Cad protein_coding retained_intron MGP_LPJ_T0070579.1 MGP_LPJ_G0029307.1 mouse_genomes_project 5 29492202 29498976 + Cad protein_coding retained_intron MGP_LPJ_T0070580.1 MGP_LPJ_G0029307.1 mouse_genomes_project 5 29498302 29499188 + Cad protein_coding processed_transcript MGP_LPJ_T0070581.1 MGP_LPJ_G0029307.1 mouse_genomes_project 5 29502363 29504202 + Cad protein_coding processed_transcript MGP_LPJ_T0070582.1 MGP_LPJ_G0029307.1 mouse_genomes_project 5 29502476 29504713 + Cad protein_coding retained_intron MGP_LPJ_T0070583.1 MGP_LPJ_G0029307.1 mouse_genomes_project 5 29502562 29504990 + Cad protein_coding retained_intron MGP_LPJ_T0070584.1 MGP_LPJ_G0029307.1 mouse_genomes_project 5 29504316 29505588 + Cad protein_coding retained_intron MGP_LPJ_T0070585.1 MGP_LPJ_G0029307.1 mouse_genomes_project 5 29506124 29508036 + MGP_LPJ_P0070585 Cad protein_coding protein_coding MGP_LPJ_T0070586.1 MGP_LPJ_G0029307.1 mouse_genomes_project 5 29507820 29508674 + Cad protein_coding retained_intron MGP_LPJ_T0015063.1 MGP_LPJ_G0013154.1 mouse_genomes_project 5 110716681 110717103 - processed_pseudogene processed_pseudogene MGP_LPJ_T0072308.1 MGP_LPJ_G0029616.1 mouse_genomes_project 5 90834923 90869834 - MGP_LPJ_P0072308 Gc protein_coding protein_coding MGP_LPJ_T0072309.1 MGP_LPJ_G0029616.1 mouse_genomes_project 5 90839249 90847745 - MGP_LPJ_P0072309 Gc protein_coding protein_coding MGP_LPJ_T0001702.1 MGP_LPJ_G0001615.1 mouse_genomes_project 5 69530101 69532492 - TEC TEC MGP_LPJ_T0098626.1 MGP_LPJ_G0036900.1 mouse_genomes_project 5 102944665 102945089 - Gm43514 sense_intronic sense_intronic MGP_LPJ_T0074046.1 MGP_LPJ_G0029968.1 mouse_genomes_project 5 127393255 127488952 + Psmd9 protein_coding processed_transcript MGP_LPJ_T0074053.1 MGP_LPJ_G0029968.1 mouse_genomes_project 5 127477512 127494646 + Psmd9 protein_coding processed_transcript MGP_LPJ_T0074054.1 MGP_LPJ_G0029968.1 mouse_genomes_project 5 127477512 127507140 + MGP_LPJ_P0074054 Psmd9 protein_coding protein_coding MGP_LPJ_T0074055.1 MGP_LPJ_G0029968.1 mouse_genomes_project 5 127477580 127478359 + Psmd9 protein_coding retained_intron MGP_LPJ_T0074056.1 MGP_LPJ_G0029968.1 mouse_genomes_project 5 127478271 127480233 + Psmd9 protein_coding TEC MGP_LPJ_T0074057.1 MGP_LPJ_G0029968.1 mouse_genomes_project 5 127483952 127505531 + MGP_LPJ_P0074057 Psmd9 protein_coding protein_coding MGP_LPJ_T0074058.1 MGP_LPJ_G0029968.1 mouse_genomes_project 5 127491199 127505531 + MGP_LPJ_P0074058 Psmd9 protein_coding protein_coding MGP_LPJ_T0071206.1 MGP_LPJ_G0029405.1 mouse_genomes_project 5 36892131 36991144 + MGP_LPJ_P0071206 Stx18 protein_coding protein_coding MGP_LPJ_T0071207.1 MGP_LPJ_G0029405.1 mouse_genomes_project 5 36892149 36991150 + MGP_LPJ_P0071207 Stx18 protein_coding protein_coding MGP_LPJ_T0071208.1 MGP_LPJ_G0029405.1 mouse_genomes_project 5 36892180 36970700 + MGP_LPJ_P0071208 Stx18 protein_coding protein_coding MGP_LPJ_T0071209.1 MGP_LPJ_G0029405.1 mouse_genomes_project 5 36892230 36991154 + MGP_LPJ_P0071209 Stx18 protein_coding protein_coding MGP_LPJ_T0071210.1 MGP_LPJ_G0029405.1 mouse_genomes_project 5 36930755 36982473 + MGP_LPJ_P0071210 Stx18 protein_coding protein_coding MGP_LPJ_T0071211.1 MGP_LPJ_G0029405.1 mouse_genomes_project 5 36965601 36975699 + Stx18 protein_coding processed_transcript MGP_LPJ_T0071212.1 MGP_LPJ_G0029405.1 mouse_genomes_project 5 36975308 36982499 + Stx18 protein_coding retained_intron MGP_LPJ_T0001835.1 MGP_LPJ_G0001747.1 mouse_genomes_project 5 126556188 126556483 + TEC TEC MGP_LPJ_T0075812.1 MGP_LPJ_G0030306.1 mouse_genomes_project 5 155771375 155802863 + MGP_LPJ_P0075812 Alox5ap protein_coding protein_coding MGP_LPJ_T0075813.1 MGP_LPJ_G0030306.1 mouse_genomes_project 5 155793824 155802563 + MGP_LPJ_P0075813 Alox5ap protein_coding protein_coding MGP_LPJ_T0075814.1 MGP_LPJ_G0030306.1 mouse_genomes_project 5 155802227 155802857 + Alox5ap protein_coding processed_transcript MGP_LPJ_T0073090.1 MGP_LPJ_G0029792.1 mouse_genomes_project 5 113683874 113690921 + MGP_LPJ_P0073090 Ddx51 protein_coding protein_coding MGP_LPJ_T0073091.1 MGP_LPJ_G0029792.1 mouse_genomes_project 5 113683969 113685569 + Ddx51 protein_coding retained_intron MGP_LPJ_T0073092.1 MGP_LPJ_G0029792.1 mouse_genomes_project 5 113685560 113686329 + Ddx51 protein_coding retained_intron MGP_LPJ_T0073093.1 MGP_LPJ_G0029792.1 mouse_genomes_project 5 113687058 113687534 + Ddx51 protein_coding retained_intron MGP_LPJ_T0073094.1 MGP_LPJ_G0029792.1 mouse_genomes_project 5 113687285 113688295 + MGP_LPJ_P0073094 Ddx51 protein_coding nonsense_mediated_decay MGP_LPJ_T0098043.1 MGP_LPJ_G0036324.1 mouse_genomes_project 5 140644885 140645267 - pseudogene pseudogene MGP_LPJ_T0014865.1 MGP_LPJ_G0012956.1 mouse_genomes_project 5 24605401 24607214 + processed_pseudogene processed_pseudogene MGP_LPJ_T0070238.1 MGP_LPJ_G0029242.1 mouse_genomes_project 5 22549454 22556561 + MGP_LPJ_P0070238 Slc4a2 protein_coding protein_coding MGP_LPJ_T0070239.1 MGP_LPJ_G0029242.1 mouse_genomes_project 5 22549470 22560670 + Slc4a2 protein_coding processed_transcript MGP_LPJ_T0070240.1 MGP_LPJ_G0029242.1 mouse_genomes_project 5 22549476 22560403 + MGP_LPJ_P0070240 Slc4a2 protein_coding protein_coding MGP_LPJ_T0070241.1 MGP_LPJ_G0029242.1 mouse_genomes_project 5 22554180 22573383 + MGP_LPJ_P0070241 Slc4a2 protein_coding protein_coding MGP_LPJ_T0070242.1 MGP_LPJ_G0029242.1 mouse_genomes_project 5 22554224 22556538 + Slc4a2 protein_coding processed_transcript MGP_LPJ_T0070243.1 MGP_LPJ_G0029242.1 mouse_genomes_project 5 22554233 22556652 + Slc4a2 protein_coding processed_transcript MGP_LPJ_T0070244.1 MGP_LPJ_G0029242.1 mouse_genomes_project 5 22555779 22560373 + MGP_LPJ_P0070244 Slc4a2 protein_coding protein_coding MGP_LPJ_T0070245.1 MGP_LPJ_G0029242.1 mouse_genomes_project 5 22558728 22573380 + MGP_LPJ_P0070245 Slc4a2 protein_coding protein_coding MGP_LPJ_T0070246.1 MGP_LPJ_G0029242.1 mouse_genomes_project 5 22558783 22560359 + Slc4a2 protein_coding processed_transcript MGP_LPJ_T0070247.1 MGP_LPJ_G0029242.1 mouse_genomes_project 5 22558943 22573380 + MGP_LPJ_P0070247 Slc4a2 protein_coding protein_coding MGP_LPJ_T0070248.1 MGP_LPJ_G0029242.1 mouse_genomes_project 5 22559538 22560300 + Slc4a2 protein_coding retained_intron MGP_LPJ_T0070249.1 MGP_LPJ_G0029242.1 mouse_genomes_project 5 22561856 22564873 + Slc4a2 protein_coding retained_intron MGP_LPJ_T0070250.1 MGP_LPJ_G0029242.1 mouse_genomes_project 5 22566065 22567008 + Slc4a2 protein_coding retained_intron MGP_LPJ_T0070251.1 MGP_LPJ_G0029242.1 mouse_genomes_project 5 22567280 22571689 + Slc4a2 protein_coding retained_intron MGP_LPJ_T0070254.1 MGP_LPJ_G0029242.1 mouse_genomes_project 5 22572178 22573005 + Slc4a2 protein_coding retained_intron MGP_LPJ_T0014881.1 MGP_LPJ_G0012972.1 mouse_genomes_project 5 30689475 30690058 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008379.1 MGP_LPJ_G0006806.1 mouse_genomes_project 5 128448234 128449390 - Gm16001 lincRNA lincRNA MGP_LPJ_T0008380.1 MGP_LPJ_G0006806.1 mouse_genomes_project 5 128448263 128449343 - Gm16001 lincRNA lincRNA MGP_LPJ_T0075718.1 MGP_LPJ_G0030290.1 mouse_genomes_project 5 153529474 153531580 + MGP_LPJ_P0075718 Gsx1 protein_coding protein_coding MGP_LPJ_T0001766.1 MGP_LPJ_G0001678.1 mouse_genomes_project 5 106106315 106106640 - TEC TEC MGP_LPJ_T0015002.1 MGP_LPJ_G0013093.1 mouse_genomes_project 5 87230013 87230224 - processed_pseudogene processed_pseudogene MGP_LPJ_T0073341.1 MGP_LPJ_G0029840.1 mouse_genomes_project 5 117738962 117753435 - MGP_LPJ_P0073341 Mmab protein_coding protein_coding MGP_LPJ_T0073342.1 MGP_LPJ_G0029840.1 mouse_genomes_project 5 117741128 117753396 - MGP_LPJ_P0073342 Mmab protein_coding protein_coding MGP_LPJ_T0073343.1 MGP_LPJ_G0029840.1 mouse_genomes_project 5 117742559 117753367 - MGP_LPJ_P0073343 Mmab protein_coding protein_coding MGP_LPJ_T0008124.1 MGP_LPJ_G0006621.1 mouse_genomes_project 5 38211067 38217211 + Gm43454 lincRNA lincRNA MGP_LPJ_T0004652.1 MGP_LPJ_G0004030.1 mouse_genomes_project 5 438815 440078 + 2510017J16Rik antisense antisense MGP_LPJ_T0001562.1 MGP_LPJ_G0001476.1 mouse_genomes_project 5 43329850 43330665 + TEC TEC MGP_LPJ_T0001656.1 MGP_LPJ_G0001569.1 mouse_genomes_project 5 65426630 65427817 - TEC TEC MGP_LPJ_T0015132.1 MGP_LPJ_G0013223.1 mouse_genomes_project 5 145615318 145615810 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008059.1 MGP_LPJ_G0006582.1 mouse_genomes_project 5 13601777 13622617 - 4930519H02Rik lincRNA lincRNA MGP_LPJ_T0008060.1 MGP_LPJ_G0006582.1 mouse_genomes_project 5 13606139 13622680 - 4930519H02Rik lincRNA lincRNA MGP_LPJ_T0071051.1 MGP_LPJ_G0029375.1 mouse_genomes_project 5 33737646 33763023 + MGP_LPJ_P0071051 Dok7 protein_coding protein_coding MGP_LPJ_T0071052.1 MGP_LPJ_G0029375.1 mouse_genomes_project 5 33737742 33763023 + MGP_LPJ_P0071052 Dok7 protein_coding protein_coding MGP_LPJ_T0071053.1 MGP_LPJ_G0029375.1 mouse_genomes_project 5 33737768 33747364 + MGP_LPJ_P0071053 Dok7 protein_coding protein_coding MGP_LPJ_T0071054.1 MGP_LPJ_G0029375.1 mouse_genomes_project 5 33737957 33769898 + MGP_LPJ_P0071054 Dok7 protein_coding protein_coding MGP_LPJ_T0071055.1 MGP_LPJ_G0029375.1 mouse_genomes_project 5 33757016 33763023 + Dok7 protein_coding retained_intron MGP_LPJ_T0001731.1 MGP_LPJ_G0001643.1 mouse_genomes_project 5 77291953 77294380 - TEC TEC MGP_LPJ_T0014805.1 MGP_LPJ_G0012896.1 mouse_genomes_project 5 6432716 6433162 - processed_pseudogene processed_pseudogene MGP_LPJ_T0074339.1 MGP_LPJ_G0030016.1 mouse_genomes_project 5 129849911 129892370 + MGP_LPJ_P0074339 Aacs protein_coding protein_coding MGP_LPJ_T0074340.1 MGP_LPJ_G0030016.1 mouse_genomes_project 5 129880160 129887699 + Aacs protein_coding retained_intron MGP_LPJ_T0074341.1 MGP_LPJ_G0030016.1 mouse_genomes_project 5 129884471 129886857 + Aacs protein_coding retained_intron MGP_LPJ_T0074342.1 MGP_LPJ_G0030016.1 mouse_genomes_project 5 129887660 129888163 + Aacs protein_coding processed_transcript MGP_LPJ_T0074343.1 MGP_LPJ_G0030016.1 mouse_genomes_project 5 129889158 129889956 + Aacs protein_coding processed_transcript MGP_LPJ_T0074344.1 MGP_LPJ_G0030016.1 mouse_genomes_project 5 129890204 129891315 + Aacs protein_coding processed_transcript MGP_LPJ_T0072018.1 MGP_LPJ_G0029544.1 mouse_genomes_project 5 76924357 76943596 - MGP_LPJ_P0072018 Pdcl2 protein_coding protein_coding MGP_LPJ_T0072019.1 MGP_LPJ_G0029544.1 mouse_genomes_project 5 76924369 76943619 - MGP_LPJ_P0072019 Pdcl2 protein_coding protein_coding MGP_LPJ_T0100834.1 MGP_LPJ_G0039097.1 mouse_genomes_project 5 62506858 62506990 - Gm24079 snoRNA snoRNA MGP_LPJ_T0098279.1 MGP_LPJ_G0036560.1 mouse_genomes_project 5 136344083 136344206 + Gm27266 rRNA rRNA MGP_LPJ_T0008334.1 MGP_LPJ_G0006774.1 mouse_genomes_project 5 119518458 119520838 - Gm13842 lincRNA lincRNA MGP_LPJ_T0008335.1 MGP_LPJ_G0006774.1 mouse_genomes_project 5 119518893 119521232 - Gm13842 lincRNA lincRNA MGP_LPJ_T0015100.1 MGP_LPJ_G0013191.1 mouse_genomes_project 5 126616775 126617095 - processed_pseudogene processed_pseudogene MGP_LPJ_T0069958.1 MGP_LPJ_G0029191.1 mouse_genomes_project 5 5906514 5975071 + MGP_LPJ_P0069958 Abcb1b protein_coding nonsense_mediated_decay MGP_LPJ_T0069959.1 MGP_LPJ_G0029191.1 mouse_genomes_project 5 5906520 5925134 + MGP_LPJ_P0069959 Abcb1b protein_coding nonsense_mediated_decay MGP_LPJ_T0069960.1 MGP_LPJ_G0029191.1 mouse_genomes_project 5 5906553 5994088 + MGP_LPJ_P0069960 Abcb1b protein_coding protein_coding MGP_LPJ_T0069961.1 MGP_LPJ_G0029191.1 mouse_genomes_project 5 5907110 5993723 + MGP_LPJ_P0069961 Abcb1b protein_coding unknown_likely_coding MGP_LPJ_T0069962.1 MGP_LPJ_G0029191.1 mouse_genomes_project 5 5937170 5948239 + Abcb1b protein_coding retained_intron MGP_LPJ_T0069963.1 MGP_LPJ_G0029191.1 mouse_genomes_project 5 5965223 5980328 + Abcb1b protein_coding processed_transcript MGP_LPJ_T0069964.1 MGP_LPJ_G0029191.1 mouse_genomes_project 5 5978088 5980487 + Abcb1b protein_coding retained_intron MGP_LPJ_T0069965.1 MGP_LPJ_G0029191.1 mouse_genomes_project 5 5978293 5993708 + MGP_LPJ_P0069965 Abcb1b protein_coding protein_coding MGP_LPJ_T0069966.1 MGP_LPJ_G0029191.1 mouse_genomes_project 5 5978561 5981587 + Abcb1b protein_coding retained_intron MGP_LPJ_T0074268.1 MGP_LPJ_G0030003.1 mouse_genomes_project 5 128934088 128945894 - MGP_LPJ_P0074268 Eif2b1 protein_coding protein_coding MGP_LPJ_T0074269.1 MGP_LPJ_G0030003.1 mouse_genomes_project 5 128935629 128938795 - Eif2b1 protein_coding retained_intron MGP_LPJ_T0074270.1 MGP_LPJ_G0030003.1 mouse_genomes_project 5 128936959 128945824 - MGP_LPJ_P0074270 Eif2b1 protein_coding nonsense_mediated_decay MGP_LPJ_T0074271.1 MGP_LPJ_G0030003.1 mouse_genomes_project 5 128937609 128945838 - MGP_LPJ_P0074271 Eif2b1 protein_coding protein_coding MGP_LPJ_T0074272.1 MGP_LPJ_G0030003.1 mouse_genomes_project 5 128940718 128945755 - MGP_LPJ_P0074272 Eif2b1 protein_coding protein_coding MGP_LPJ_T0074273.1 MGP_LPJ_G0030003.1 mouse_genomes_project 5 128945281 128945795 - MGP_LPJ_P0074273 Eif2b1 protein_coding nonsense_mediated_decay MGP_LPJ_T0100837.1 MGP_LPJ_G0039100.1 mouse_genomes_project 5 65954099 65954293 + Gm24346 snoRNA snoRNA MGP_LPJ_T0004680.1 MGP_LPJ_G0004053.1 mouse_genomes_project 5 29573147 29574714 - Gm15469 antisense antisense MGP_LPJ_T0098280.1 MGP_LPJ_G0036561.1 mouse_genomes_project 5 139292520 139292634 + n-R5s178 rRNA rRNA MGP_LPJ_T0001529.1 MGP_LPJ_G0001443.1 mouse_genomes_project 5 30994128 30996373 + TEC TEC MGP_LPJ_T0001655.1 MGP_LPJ_G0001568.1 mouse_genomes_project 5 65072672 65074971 + TEC TEC MGP_LPJ_T0014963.1 MGP_LPJ_G0013054.1 mouse_genomes_project 5 64296153 64298316 - processed_pseudogene processed_pseudogene MGP_LPJ_T0071231.1 MGP_LPJ_G0029408.1 mouse_genomes_project 5 37076190 37086513 + MGP_LPJ_P0071231 Lyar protein_coding protein_coding MGP_LPJ_T0071232.1 MGP_LPJ_G0029408.1 mouse_genomes_project 5 37076228 37083725 + MGP_LPJ_P0071232 Lyar protein_coding protein_coding MGP_LPJ_T0071233.1 MGP_LPJ_G0029408.1 mouse_genomes_project 5 37076235 37086514 + MGP_LPJ_P0071233 Lyar protein_coding protein_coding MGP_LPJ_T0071234.1 MGP_LPJ_G0029408.1 mouse_genomes_project 5 37076237 37086798 + MGP_LPJ_P0071234 Lyar protein_coding nonsense_mediated_decay MGP_LPJ_T0071235.1 MGP_LPJ_G0029408.1 mouse_genomes_project 5 37076258 37081622 + MGP_LPJ_P0071235 Lyar protein_coding protein_coding MGP_LPJ_T0071236.1 MGP_LPJ_G0029408.1 mouse_genomes_project 5 37076262 37083909 + MGP_LPJ_P0071236 Lyar protein_coding protein_coding MGP_LPJ_T0071237.1 MGP_LPJ_G0029408.1 mouse_genomes_project 5 37076305 37090115 + MGP_LPJ_P0071237 Lyar protein_coding protein_coding MGP_LPJ_T0071238.1 MGP_LPJ_G0029408.1 mouse_genomes_project 5 37078673 37086493 + MGP_LPJ_P0071238 Lyar protein_coding nonsense_mediated_decay MGP_LPJ_T0071239.1 MGP_LPJ_G0029408.1 mouse_genomes_project 5 37080356 37082169 + Lyar protein_coding retained_intron MGP_LPJ_T0074884.1 MGP_LPJ_G0030112.1 mouse_genomes_project 5 141836745 142012585 - MGP_LPJ_P0074884 Col26a1 protein_coding protein_coding MGP_LPJ_T0074885.1 MGP_LPJ_G0030112.1 mouse_genomes_project 5 141836745 142012648 - MGP_LPJ_P0074885 Col26a1 protein_coding protein_coding MGP_LPJ_T0074886.1 MGP_LPJ_G0030112.1 mouse_genomes_project 5 141837741 141839541 - Col26a1 protein_coding retained_intron MGP_LPJ_T0074887.1 MGP_LPJ_G0030112.1 mouse_genomes_project 5 141838060 141842693 - Col26a1 protein_coding retained_intron MGP_LPJ_T0074888.1 MGP_LPJ_G0030112.1 mouse_genomes_project 5 141848518 142012374 - Col26a1 protein_coding retained_intron MGP_LPJ_T0074889.1 MGP_LPJ_G0030112.1 mouse_genomes_project 5 141849237 141850905 - Col26a1 protein_coding retained_intron MGP_LPJ_T0074890.1 MGP_LPJ_G0030112.1 mouse_genomes_project 5 141853184 142012673 - Col26a1 protein_coding retained_intron MGP_LPJ_T0074891.1 MGP_LPJ_G0030112.1 mouse_genomes_project 5 141853358 141873385 - Col26a1 protein_coding processed_transcript MGP_LPJ_T0074892.1 MGP_LPJ_G0030112.1 mouse_genomes_project 5 141861187 142012207 - Col26a1 protein_coding processed_transcript MGP_LPJ_T0074893.1 MGP_LPJ_G0030112.1 mouse_genomes_project 5 141947940 141955660 - Col26a1 protein_coding retained_intron MGP_LPJ_T0074894.1 MGP_LPJ_G0030112.1 mouse_genomes_project 5 141948720 142012394 - Col26a1 protein_coding retained_intron MGP_LPJ_T0001764.1 MGP_LPJ_G0001676.1 mouse_genomes_project 5 105169511 105171991 - TEC TEC MGP_LPJ_T0073081.1 MGP_LPJ_G0029790.1 mouse_genomes_project 5 113572921 113651897 + MGP_LPJ_P0073081 Galnt9 protein_coding protein_coding MGP_LPJ_T0073082.1 MGP_LPJ_G0029790.1 mouse_genomes_project 5 113633790 113651899 + MGP_LPJ_P0073082 Galnt9 protein_coding nonsense_mediated_decay MGP_LPJ_T0073083.1 MGP_LPJ_G0029790.1 mouse_genomes_project 5 113633791 113651902 + MGP_LPJ_P0073083 Galnt9 protein_coding protein_coding MGP_LPJ_T0015069.1 MGP_LPJ_G0013160.1 mouse_genomes_project 5 111727538 111727912 + processed_pseudogene processed_pseudogene MGP_LPJ_T0070600.1 MGP_LPJ_G0029312.1 mouse_genomes_project 5 29579297 29595630 - MGP_LPJ_P0070600 Mpv17 protein_coding protein_coding MGP_LPJ_T0070601.1 MGP_LPJ_G0029312.1 mouse_genomes_project 5 29579306 29595601 - MGP_LPJ_P0070601 Mpv17 protein_coding protein_coding MGP_LPJ_T0070602.1 MGP_LPJ_G0029312.1 mouse_genomes_project 5 29580059 29595577 - MGP_LPJ_P0070602 Mpv17 protein_coding protein_coding MGP_LPJ_T0070603.1 MGP_LPJ_G0029312.1 mouse_genomes_project 5 29580421 29595607 - MGP_LPJ_P0070603 Mpv17 protein_coding protein_coding MGP_LPJ_T0070604.1 MGP_LPJ_G0029312.1 mouse_genomes_project 5 29580479 29595531 - MGP_LPJ_P0070604 Mpv17 protein_coding protein_coding MGP_LPJ_T0070605.1 MGP_LPJ_G0029312.1 mouse_genomes_project 5 29580504 29595571 - MGP_LPJ_P0070605 Mpv17 protein_coding protein_coding MGP_LPJ_T0070606.1 MGP_LPJ_G0029312.1 mouse_genomes_project 5 29580572 29584857 - MGP_LPJ_P0070606 Mpv17 protein_coding protein_coding MGP_LPJ_T0070607.1 MGP_LPJ_G0029312.1 mouse_genomes_project 5 29580674 29584877 - Mpv17 protein_coding retained_intron MGP_LPJ_T0070608.1 MGP_LPJ_G0029312.1 mouse_genomes_project 5 29582890 29595597 - Mpv17 protein_coding retained_intron MGP_LPJ_T0070609.1 MGP_LPJ_G0029312.1 mouse_genomes_project 5 29583090 29595600 - MGP_LPJ_P0070609 Mpv17 protein_coding protein_coding MGP_LPJ_T0070611.1 MGP_LPJ_G0029312.1 mouse_genomes_project 5 29583856 29595597 - Mpv17 protein_coding retained_intron MGP_LPJ_T0070612.1 MGP_LPJ_G0029312.1 mouse_genomes_project 5 29584092 29595121 - Mpv17 protein_coding retained_intron MGP_LPJ_T0072790.1 MGP_LPJ_G0029730.1 mouse_genomes_project 5 109155741 109155845 + MGP_LPJ_P0072790 Gm17304 protein_coding protein_coding MGP_LPJ_T0071554.1 MGP_LPJ_G0029465.1 mouse_genomes_project 5 64127973 64161866 + MGP_LPJ_P0071554 Pgm1 protein_coding protein_coding MGP_LPJ_T0071555.1 MGP_LPJ_G0029465.1 mouse_genomes_project 5 64139987 64147035 + MGP_LPJ_P0071555 Pgm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0071556.1 MGP_LPJ_G0029465.1 mouse_genomes_project 5 64142874 64144751 + Pgm1 protein_coding retained_intron MGP_LPJ_T0071557.1 MGP_LPJ_G0029465.1 mouse_genomes_project 5 64149175 64161679 + MGP_LPJ_P0071557 Pgm1 protein_coding protein_coding MGP_LPJ_T0014967.1 MGP_LPJ_G0013058.1 mouse_genomes_project 5 67146167 67146678 + processed_pseudogene processed_pseudogene MGP_LPJ_T0073344.1 MGP_LPJ_G0029841.1 mouse_genomes_project 5 117753643 117762672 + MGP_LPJ_P0073344 Mvk protein_coding protein_coding MGP_LPJ_T0073345.1 MGP_LPJ_G0029841.1 mouse_genomes_project 5 117753660 117769937 + MGP_LPJ_P0073345 Mvk protein_coding protein_coding MGP_LPJ_T0073346.1 MGP_LPJ_G0029841.1 mouse_genomes_project 5 117753668 117770044 + Mvk protein_coding retained_intron MGP_LPJ_T0073347.1 MGP_LPJ_G0029841.1 mouse_genomes_project 5 117753677 117762672 + MGP_LPJ_P0073347 Mvk protein_coding protein_coding MGP_LPJ_T0073348.1 MGP_LPJ_G0029841.1 mouse_genomes_project 5 117753677 117765013 + MGP_LPJ_P0073348 Mvk protein_coding protein_coding MGP_LPJ_T0073349.1 MGP_LPJ_G0029841.1 mouse_genomes_project 5 117753680 117770051 + MGP_LPJ_P0073349 Mvk protein_coding protein_coding MGP_LPJ_T0073350.1 MGP_LPJ_G0029841.1 mouse_genomes_project 5 117761944 117770032 + MGP_LPJ_P0073350 Mvk protein_coding protein_coding MGP_LPJ_T0072063.1 MGP_LPJ_G0029550.1 mouse_genomes_project 5 77568345 77602659 - MGP_LPJ_P0072063 Ppat protein_coding nonsense_mediated_decay MGP_LPJ_T0072064.1 MGP_LPJ_G0029550.1 mouse_genomes_project 5 77568372 77602665 - MGP_LPJ_P0072064 Ppat protein_coding protein_coding MGP_LPJ_T0072065.1 MGP_LPJ_G0029550.1 mouse_genomes_project 5 77570140 77602252 - Ppat protein_coding retained_intron MGP_LPJ_T0014992.1 MGP_LPJ_G0013083.1 mouse_genomes_project 5 78639213 78639550 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001633.1 MGP_LPJ_G0001547.1 mouse_genomes_project 5 57400162 57403535 + TEC TEC MGP_LPJ_T0004880.1 MGP_LPJ_G0004199.1 mouse_genomes_project 5 139949867 139951007 - Abhd11os antisense antisense MGP_LPJ_T0004881.1 MGP_LPJ_G0004199.1 mouse_genomes_project 5 139949875 139950908 - Abhd11os antisense antisense MGP_LPJ_T0001846.1 MGP_LPJ_G0001758.1 mouse_genomes_project 5 127832536 127832999 - TEC TEC MGP_LPJ_T0100841.1 MGP_LPJ_G0039104.1 mouse_genomes_project 5 79569818 79569954 + Gm25756 snoRNA snoRNA MGP_LPJ_T0070216.1 MGP_LPJ_G0029237.1 mouse_genomes_project 5 22486366 22505902 + MGP_LPJ_P0070216 Nos3 protein_coding protein_coding MGP_LPJ_T0070217.1 MGP_LPJ_G0029237.1 mouse_genomes_project 5 22486366 22505754 + MGP_LPJ_P0070217 Nos3 protein_coding protein_coding MGP_LPJ_T0069814.1 MGP_LPJ_G0029168.1 mouse_genomes_project 5 703217 724249 + MGP_LPJ_P0069814 Lrrd1 protein_coding protein_coding MGP_LPJ_T0069815.1 MGP_LPJ_G0029168.1 mouse_genomes_project 5 703231 708198 + MGP_LPJ_P0069815 Lrrd1 protein_coding protein_coding MGP_LPJ_T0070656.1 MGP_LPJ_G0029318.1 mouse_genomes_project 5 29645872 29665391 - MGP_LPJ_P0070656 Ppm1g protein_coding protein_coding MGP_LPJ_T0070657.1 MGP_LPJ_G0029318.1 mouse_genomes_project 5 29645876 29665513 - MGP_LPJ_P0070657 Ppm1g protein_coding protein_coding MGP_LPJ_T0070658.1 MGP_LPJ_G0029318.1 mouse_genomes_project 5 29646310 29648292 - Ppm1g protein_coding retained_intron MGP_LPJ_T0070660.1 MGP_LPJ_G0029318.1 mouse_genomes_project 5 29648300 29650874 - MGP_LPJ_P0070660 Ppm1g protein_coding protein_coding MGP_LPJ_T0070661.1 MGP_LPJ_G0029318.1 mouse_genomes_project 5 29663606 29665391 - Ppm1g protein_coding retained_intron MGP_LPJ_T0071607.1 MGP_LPJ_G0029475.1 mouse_genomes_project 5 65472909 65509541 + MGP_LPJ_P0071607 Klb protein_coding protein_coding MGP_LPJ_T0071608.1 MGP_LPJ_G0029475.1 mouse_genomes_project 5 65473002 65474841 + Klb protein_coding retained_intron MGP_LPJ_T0071609.1 MGP_LPJ_G0029475.1 mouse_genomes_project 5 65473003 65503925 + MGP_LPJ_P0071609 Klb protein_coding nonsense_mediated_decay MGP_LPJ_T0071069.1 MGP_LPJ_G0029381.1 mouse_genomes_project 5 34304918 34339116 + MGP_LPJ_P0071069 Acox3 protein_coding protein_coding MGP_LPJ_T0071070.1 MGP_LPJ_G0029381.1 mouse_genomes_project 5 34304929 34337922 + MGP_LPJ_P0071070 Acox3 protein_coding protein_coding MGP_LPJ_T0071071.1 MGP_LPJ_G0029381.1 mouse_genomes_project 5 34304956 34310634 + MGP_LPJ_P0071071 Acox3 protein_coding protein_coding MGP_LPJ_T0071072.1 MGP_LPJ_G0029381.1 mouse_genomes_project 5 34304957 34340667 + MGP_LPJ_P0071072 Acox3 protein_coding protein_coding MGP_LPJ_T0071073.1 MGP_LPJ_G0029381.1 mouse_genomes_project 5 34304970 34309329 + Acox3 protein_coding retained_intron MGP_LPJ_T0071074.1 MGP_LPJ_G0029381.1 mouse_genomes_project 5 34304980 34337191 + MGP_LPJ_P0071074 Acox3 protein_coding protein_coding MGP_LPJ_T0071075.1 MGP_LPJ_G0029381.1 mouse_genomes_project 5 34305401 34337184 + MGP_LPJ_P0071075 Acox3 protein_coding protein_coding MGP_LPJ_T0071076.1 MGP_LPJ_G0029381.1 mouse_genomes_project 5 34324285 34333649 + MGP_LPJ_P0071076 Acox3 protein_coding protein_coding MGP_LPJ_T0071077.1 MGP_LPJ_G0029381.1 mouse_genomes_project 5 34329602 34335234 + Acox3 protein_coding retained_intron MGP_LPJ_T0071078.1 MGP_LPJ_G0029381.1 mouse_genomes_project 5 34335413 34337202 + Acox3 protein_coding retained_intron MGP_LPJ_T0075340.1 MGP_LPJ_G0030205.1 mouse_genomes_project 5 146320557 146328783 + MGP_LPJ_P0075340 Lfng protein_coding protein_coding MGP_LPJ_T0075341.1 MGP_LPJ_G0030205.1 mouse_genomes_project 5 146324746 146326570 + Lfng protein_coding processed_transcript MGP_LPJ_T0075342.1 MGP_LPJ_G0030205.1 mouse_genomes_project 5 146324922 146327912 + Lfng protein_coding retained_intron MGP_LPJ_T0010729.1 MGP_LPJ_G0008847.1 mouse_genomes_project 5 119113896 119113956 + Mir7030 miRNA miRNA MGP_LPJ_T0102178.1 MGP_LPJ_G0040215.1 mouse_genomes_project 5 88147667 88150517 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0004698.1 MGP_LPJ_G0004070.1 mouse_genomes_project 5 37628471 37642736 + Clnkos antisense antisense MGP_LPJ_T0004699.1 MGP_LPJ_G0004070.1 mouse_genomes_project 5 37628472 37642736 + Clnkos antisense antisense MGP_LPJ_T0070684.1 MGP_LPJ_G0029322.1 mouse_genomes_project 5 29699428 29738695 - MGP_LPJ_P0070684 Ift172 protein_coding protein_coding MGP_LPJ_T0070685.1 MGP_LPJ_G0029322.1 mouse_genomes_project 5 29699431 29700805 - Ift172 protein_coding retained_intron MGP_LPJ_T0070686.1 MGP_LPJ_G0029322.1 mouse_genomes_project 5 29699704 29700962 - Ift172 protein_coding retained_intron MGP_LPJ_T0070687.1 MGP_LPJ_G0029322.1 mouse_genomes_project 5 29706627 29707393 - Ift172 protein_coding retained_intron MGP_LPJ_T0070688.1 MGP_LPJ_G0029322.1 mouse_genomes_project 5 29707501 29710070 - Ift172 protein_coding retained_intron MGP_LPJ_T0070689.1 MGP_LPJ_G0029322.1 mouse_genomes_project 5 29708978 29709778 - Ift172 protein_coding retained_intron MGP_LPJ_T0070690.1 MGP_LPJ_G0029322.1 mouse_genomes_project 5 29712485 29727924 - MGP_LPJ_P0070690 Ift172 protein_coding protein_coding MGP_LPJ_T0070691.1 MGP_LPJ_G0029322.1 mouse_genomes_project 5 29718368 29728945 - MGP_LPJ_P0070691 Ift172 protein_coding protein_coding MGP_LPJ_T0070692.1 MGP_LPJ_G0029322.1 mouse_genomes_project 5 29723014 29738627 - Ift172 protein_coding retained_intron MGP_LPJ_T0070693.1 MGP_LPJ_G0029322.1 mouse_genomes_project 5 29732955 29734068 - Ift172 protein_coding retained_intron MGP_LPJ_T0070694.1 MGP_LPJ_G0029322.1 mouse_genomes_project 5 29733595 29738704 - MGP_LPJ_P0070694 Ift172 protein_coding protein_coding MGP_LPJ_T0098275.1 MGP_LPJ_G0036556.1 mouse_genomes_project 5 110019811 110019930 + n-R5s173 rRNA rRNA MGP_LPJ_T0100866.1 MGP_LPJ_G0039129.1 mouse_genomes_project 5 153542058 153542188 - Gm24556 snoRNA snoRNA MGP_LPJ_T0102207.1 MGP_LPJ_G0040244.1 mouse_genomes_project 5 158258685 158258773 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0014861.1 MGP_LPJ_G0012952.1 mouse_genomes_project 5 23931755 23932116 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008462.1 MGP_LPJ_G0006865.1 mouse_genomes_project 5 155282178 155299161 + Gm15407 lincRNA lincRNA MGP_LPJ_T0015058.1 MGP_LPJ_G0013149.1 mouse_genomes_project 5 109852304 109853049 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001470.1 MGP_LPJ_G0001387.1 mouse_genomes_project 5 5614417 5618545 - TEC TEC MGP_LPJ_T0098427.1 MGP_LPJ_G0036708.1 mouse_genomes_project 5 139995849 139995978 - Gm25492 scaRNA scaRNA MGP_LPJ_T0069900.1 MGP_LPJ_G0029183.1 mouse_genomes_project 5 3812520 4432449 - MGP_LPJ_P0069900 Zfp804b protein_coding protein_coding MGP_LPJ_T0069901.1 MGP_LPJ_G0029183.1 mouse_genomes_project 5 3812540 3927266 - MGP_LPJ_P0069901 Zfp804b protein_coding protein_coding MGP_LPJ_T0001847.1 MGP_LPJ_G0001759.1 mouse_genomes_project 5 127970291 127971630 - TEC TEC MGP_LPJ_T0001788.1 MGP_LPJ_G0001700.1 mouse_genomes_project 5 115511156 115512417 + TEC TEC MGP_LPJ_T0008316.1 MGP_LPJ_G0006762.1 mouse_genomes_project 5 115737430 115738164 + Gm27004 lincRNA lincRNA MGP_LPJ_T0004739.1 MGP_LPJ_G0004101.1 mouse_genomes_project 5 73581438 73582310 + 1700071G01Rik antisense antisense MGP_LPJ_T0004695.1 MGP_LPJ_G0004067.1 mouse_genomes_project 5 35660837 35664122 - Ppp2r2cos antisense antisense MGP_LPJ_T0004713.1 MGP_LPJ_G0004079.1 mouse_genomes_project 5 44843793 44848837 + 9630001P10Rik antisense antisense MGP_LPJ_T0004714.1 MGP_LPJ_G0004079.1 mouse_genomes_project 5 44844355 44850538 + 9630001P10Rik antisense antisense MGP_LPJ_T0004715.1 MGP_LPJ_G0004079.1 mouse_genomes_project 5 44844449 44849160 + 9630001P10Rik antisense antisense MGP_LPJ_T0070370.1 MGP_LPJ_G0029269.1 mouse_genomes_project 5 26516889 26525406 + MGP_LPJ_P0070370 En2 protein_coding protein_coding MGP_LPJ_T0072871.1 MGP_LPJ_G0029745.1 mouse_genomes_project 5 110379776 110514774 - MGP_LPJ_P0072871 Evi5 protein_coding protein_coding MGP_LPJ_T0072872.1 MGP_LPJ_G0029745.1 mouse_genomes_project 5 110382257 110446761 - Evi5 protein_coding retained_intron MGP_LPJ_T0072873.1 MGP_LPJ_G0029745.1 mouse_genomes_project 5 110400456 110436525 - Evi5 protein_coding retained_intron MGP_LPJ_T0072874.1 MGP_LPJ_G0029745.1 mouse_genomes_project 5 110425305 110507868 - MGP_LPJ_P0072874 Evi5 protein_coding protein_coding MGP_LPJ_T0072875.1 MGP_LPJ_G0029745.1 mouse_genomes_project 5 110450525 110507868 - MGP_LPJ_P0072875 Evi5 protein_coding protein_coding MGP_LPJ_T0072876.1 MGP_LPJ_G0029745.1 mouse_genomes_project 5 110452111 110453760 - Evi5 protein_coding retained_intron MGP_LPJ_T0072877.1 MGP_LPJ_G0029745.1 mouse_genomes_project 5 110452561 110514711 - Evi5 protein_coding processed_transcript MGP_LPJ_T0072878.1 MGP_LPJ_G0029745.1 mouse_genomes_project 5 110452561 110514726 - MGP_LPJ_P0072878 Evi5 protein_coding protein_coding MGP_LPJ_T0072879.1 MGP_LPJ_G0029745.1 mouse_genomes_project 5 110457104 110475379 - Evi5 protein_coding retained_intron MGP_LPJ_T0072880.1 MGP_LPJ_G0029745.1 mouse_genomes_project 5 110457140 110507088 - MGP_LPJ_P0072880 Evi5 protein_coding protein_coding MGP_LPJ_T0072881.1 MGP_LPJ_G0029745.1 mouse_genomes_project 5 110458732 110507599 - Evi5 protein_coding processed_transcript MGP_LPJ_T0072883.1 MGP_LPJ_G0029745.1 mouse_genomes_project 5 110489040 110514723 - Evi5 protein_coding processed_transcript MGP_LPJ_T0072884.1 MGP_LPJ_G0029745.1 mouse_genomes_project 5 110512295 110514719 - Evi5 protein_coding processed_transcript MGP_LPJ_T0014997.1 MGP_LPJ_G0013088.1 mouse_genomes_project 5 81824171 81825046 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099567.1 MGP_LPJ_G0037830.1 mouse_genomes_project 5 35437681 35437785 - Gm24878 snRNA snRNA MGP_LPJ_T0004753.1 MGP_LPJ_G0004113.1 mouse_genomes_project 5 89349782 89352647 + BC051076 antisense antisense MGP_LPJ_T0004754.1 MGP_LPJ_G0004113.1 mouse_genomes_project 5 89349782 89352650 + BC051076 antisense antisense MGP_LPJ_T0001826.1 MGP_LPJ_G0001738.1 mouse_genomes_project 5 124928691 124930996 - TEC TEC MGP_LPJ_T0001745.1 MGP_LPJ_G0001657.1 mouse_genomes_project 5 94763144 94765234 + TEC TEC MGP_LPJ_T0008355.1 MGP_LPJ_G0006792.1 mouse_genomes_project 5 123456554 123462706 - Tbx3os2 lincRNA lincRNA MGP_LPJ_T0010762.1 MGP_LPJ_G0008880.1 mouse_genomes_project 5 155761705 155761783 - miRNA miRNA MGP_LPJ_T0014909.1 MGP_LPJ_G0013000.1 mouse_genomes_project 5 40881463 40882355 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102170.1 MGP_LPJ_G0040207.1 mouse_genomes_project 5 263317 263494 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0001498.1 MGP_LPJ_G0001415.1 mouse_genomes_project 5 18663219 18663718 + TEC TEC MGP_LPJ_T0071745.1 MGP_LPJ_G0029493.1 mouse_genomes_project 5 67530225 67555417 + MGP_LPJ_P0071745 Tmem33 protein_coding protein_coding MGP_LPJ_T0071746.1 MGP_LPJ_G0029493.1 mouse_genomes_project 5 67530311 67534276 + MGP_LPJ_P0071746 Tmem33 protein_coding protein_coding MGP_LPJ_T0071747.1 MGP_LPJ_G0029493.1 mouse_genomes_project 5 67530356 67550615 + MGP_LPJ_P0071747 Tmem33 protein_coding nonsense_mediated_decay MGP_LPJ_T0071748.1 MGP_LPJ_G0029493.1 mouse_genomes_project 5 67530356 67538217 + MGP_LPJ_P0071748 Tmem33 protein_coding protein_coding MGP_LPJ_T0071749.1 MGP_LPJ_G0029493.1 mouse_genomes_project 5 67530357 67555417 + MGP_LPJ_P0071749 Tmem33 protein_coding protein_coding MGP_LPJ_T0071750.1 MGP_LPJ_G0029493.1 mouse_genomes_project 5 67530364 67533943 + MGP_LPJ_P0071750 Tmem33 protein_coding nonsense_mediated_decay MGP_LPJ_T0071751.1 MGP_LPJ_G0029493.1 mouse_genomes_project 5 67530414 67532737 + Tmem33 protein_coding retained_intron MGP_LPJ_T0071752.1 MGP_LPJ_G0029493.1 mouse_genomes_project 5 67530465 67555417 + MGP_LPJ_P0071752 Tmem33 protein_coding protein_coding MGP_LPJ_T0071753.1 MGP_LPJ_G0029493.1 mouse_genomes_project 5 67530556 67538655 + Tmem33 protein_coding retained_intron MGP_LPJ_T0074722.1 MGP_LPJ_G0030082.1 mouse_genomes_project 5 140264875 140327375 - MGP_LPJ_P0074722 Fkbp6 protein_coding protein_coding MGP_LPJ_T0074723.1 MGP_LPJ_G0030082.1 mouse_genomes_project 5 140264875 140327345 - MGP_LPJ_P0074723 Fkbp6 protein_coding protein_coding MGP_LPJ_T0074724.1 MGP_LPJ_G0030082.1 mouse_genomes_project 5 140313493 140327206 - MGP_LPJ_P0074724 Fkbp6 protein_coding protein_coding MGP_LPJ_T0074725.1 MGP_LPJ_G0030082.1 mouse_genomes_project 5 140313493 140327374 - MGP_LPJ_P0074725 Fkbp6 protein_coding protein_coding MGP_LPJ_T0001546.1 MGP_LPJ_G0001460.1 mouse_genomes_project 5 36879860 36880155 - TEC TEC MGP_LPJ_T0001918.1 MGP_LPJ_G0001828.1 mouse_genomes_project 5 145808075 145810382 - TEC TEC MGP_LPJ_T0008273.1 MGP_LPJ_G0006739.1 mouse_genomes_project 5 109121534 109122047 + Gm29464 lincRNA lincRNA MGP_LPJ_T0074616.1 MGP_LPJ_G0030060.1 mouse_genomes_project 5 139374470 139441813 - MGP_LPJ_P0074616 Clip2 protein_coding protein_coding MGP_LPJ_T0074617.1 MGP_LPJ_G0030060.1 mouse_genomes_project 5 139374474 139441813 - MGP_LPJ_P0074617 Clip2 protein_coding protein_coding MGP_LPJ_T0074618.1 MGP_LPJ_G0030060.1 mouse_genomes_project 5 139400320 139402792 - Clip2 protein_coding retained_intron MGP_LPJ_T0070369.1 MGP_LPJ_G0029268.1 mouse_genomes_project 5 26416527 26422038 + protein_coding retained_intron MGP_LPJ_T0001641.1 MGP_LPJ_G0001555.1 mouse_genomes_project 5 57653786 57654981 + TEC TEC MGP_LPJ_T0075567.1 MGP_LPJ_G0030255.1 mouse_genomes_project 5 150740611 150741462 + Trrap protein_coding processed_transcript MGP_LPJ_T0075568.1 MGP_LPJ_G0030255.1 mouse_genomes_project 5 150740862 150763383 + Trrap protein_coding retained_intron MGP_LPJ_T0075569.1 MGP_LPJ_G0030255.1 mouse_genomes_project 5 150740966 150836343 + MGP_LPJ_P0075569 Trrap protein_coding unknown_likely_coding MGP_LPJ_T0075570.1 MGP_LPJ_G0030255.1 mouse_genomes_project 5 150741314 150750947 + MGP_LPJ_P0075570 Trrap protein_coding protein_coding MGP_LPJ_T0075571.1 MGP_LPJ_G0030255.1 mouse_genomes_project 5 150741564 150836336 + MGP_LPJ_P0075571 Trrap protein_coding protein_coding MGP_LPJ_T0075572.1 MGP_LPJ_G0030255.1 mouse_genomes_project 5 150745038 150836309 + MGP_LPJ_P0075572 Trrap protein_coding protein_coding MGP_LPJ_T0075573.1 MGP_LPJ_G0030255.1 mouse_genomes_project 5 150745038 150836334 + MGP_LPJ_P0075573 Trrap protein_coding protein_coding MGP_LPJ_T0075574.1 MGP_LPJ_G0030255.1 mouse_genomes_project 5 150761022 150836334 + MGP_LPJ_P0075574 Trrap protein_coding protein_coding MGP_LPJ_T0075575.1 MGP_LPJ_G0030255.1 mouse_genomes_project 5 150766933 150769131 + Trrap protein_coding retained_intron MGP_LPJ_T0075576.1 MGP_LPJ_G0030255.1 mouse_genomes_project 5 150780187 150809961 + Trrap protein_coding retained_intron MGP_LPJ_T0075577.1 MGP_LPJ_G0030255.1 mouse_genomes_project 5 150787486 150789238 + Trrap protein_coding retained_intron MGP_LPJ_T0075578.1 MGP_LPJ_G0030255.1 mouse_genomes_project 5 150795248 150798558 + Trrap protein_coding retained_intron MGP_LPJ_T0075579.1 MGP_LPJ_G0030255.1 mouse_genomes_project 5 150814432 150815892 + Trrap protein_coding retained_intron MGP_LPJ_T0075580.1 MGP_LPJ_G0030255.1 mouse_genomes_project 5 150832304 150836335 + Trrap protein_coding retained_intron MGP_LPJ_T0075581.1 MGP_LPJ_G0030255.1 mouse_genomes_project 5 150833843 150835897 + Trrap protein_coding processed_transcript MGP_LPJ_T0008227.1 MGP_LPJ_G0006708.1 mouse_genomes_project 5 99267254 99289671 + Gm33969 lincRNA lincRNA MGP_LPJ_T0015142.1 MGP_LPJ_G0013233.1 mouse_genomes_project 5 150041747 150042704 - processed_pseudogene processed_pseudogene MGP_LPJ_T0073860.1 MGP_LPJ_G0029942.1 mouse_genomes_project 5 125977196 125985406 - Cux2 protein_coding retained_intron MGP_LPJ_T0073861.1 MGP_LPJ_G0029942.1 mouse_genomes_project 5 125977483 126057908 - MGP_LPJ_P0073861 Cux2 protein_coding protein_coding MGP_LPJ_T0073862.1 MGP_LPJ_G0029942.1 mouse_genomes_project 5 125994906 125996142 - Cux2 protein_coding retained_intron MGP_LPJ_T0073863.1 MGP_LPJ_G0029942.1 mouse_genomes_project 5 126001623 126039868 - Cux2 protein_coding processed_transcript MGP_LPJ_T0073864.1 MGP_LPJ_G0029942.1 mouse_genomes_project 5 126001629 126020578 - Cux2 protein_coding processed_transcript MGP_LPJ_T0073865.1 MGP_LPJ_G0029942.1 mouse_genomes_project 5 126007506 126188814 - MGP_LPJ_P0073865 Cux2 protein_coding protein_coding MGP_LPJ_T0073866.1 MGP_LPJ_G0029942.1 mouse_genomes_project 5 126010173 126137926 - MGP_LPJ_P0073866 Cux2 protein_coding protein_coding MGP_LPJ_T0073867.1 MGP_LPJ_G0029942.1 mouse_genomes_project 5 126020605 126041515 - Cux2 protein_coding processed_transcript MGP_LPJ_T0073868.1 MGP_LPJ_G0029942.1 mouse_genomes_project 5 126051279 126186610 - Cux2 protein_coding processed_transcript MGP_LPJ_T0071202.1 MGP_LPJ_G0029403.1 mouse_genomes_project 5 36568066 36572331 + MGP_LPJ_P0071202 Cytl1 protein_coding protein_coding MGP_LPJ_T0071203.1 MGP_LPJ_G0029403.1 mouse_genomes_project 5 36569788 36572326 + Cytl1 protein_coding retained_intron MGP_LPJ_T0074428.1 MGP_LPJ_G0030033.1 mouse_genomes_project 5 134347194 134385291 + MGP_LPJ_P0074428 Gbas protein_coding protein_coding MGP_LPJ_T0074429.1 MGP_LPJ_G0030033.1 mouse_genomes_project 5 134347230 134385214 + MGP_LPJ_P0074429 Gbas protein_coding nonsense_mediated_decay MGP_LPJ_T0074430.1 MGP_LPJ_G0030033.1 mouse_genomes_project 5 134347232 134384334 + MGP_LPJ_P0074430 Gbas protein_coding nonsense_mediated_decay MGP_LPJ_T0074431.1 MGP_LPJ_G0030033.1 mouse_genomes_project 5 134375785 134384163 + Gbas protein_coding retained_intron MGP_LPJ_T0074432.1 MGP_LPJ_G0030033.1 mouse_genomes_project 5 134376357 134378003 + Gbas protein_coding processed_transcript MGP_LPJ_T0008057.1 MGP_LPJ_G0006580.1 mouse_genomes_project 5 7493394 7608650 + Gm42831 lincRNA lincRNA MGP_LPJ_T0073185.1 MGP_LPJ_G0029810.1 mouse_genomes_project 5 115565882 115730416 - MGP_LPJ_P0073185 Sez6l protein_coding protein_coding MGP_LPJ_T0073186.1 MGP_LPJ_G0029810.1 mouse_genomes_project 5 115565887 115730523 - MGP_LPJ_P0073186 Sez6l protein_coding protein_coding MGP_LPJ_T0073187.1 MGP_LPJ_G0029810.1 mouse_genomes_project 5 115565896 115730733 - MGP_LPJ_P0073187 Sez6l protein_coding protein_coding MGP_LPJ_T0073188.1 MGP_LPJ_G0029810.1 mouse_genomes_project 5 115568549 115730725 - MGP_LPJ_P0073188 Sez6l protein_coding protein_coding MGP_LPJ_T0004657.1 MGP_LPJ_G0004035.1 mouse_genomes_project 5 11669653 11686917 - Gm4128 antisense antisense MGP_LPJ_T0001748.1 MGP_LPJ_G0001660.1 mouse_genomes_project 5 98795128 98798351 + TEC TEC MGP_LPJ_T0071540.1 MGP_LPJ_G0029461.1 mouse_genomes_project 5 62807847 62882370 + MGP_LPJ_P0071540 Dthd1 protein_coding protein_coding MGP_LPJ_T0015045.1 MGP_LPJ_G0013136.1 mouse_genomes_project 5 106218624 106218846 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001667.1 MGP_LPJ_G0001580.1 mouse_genomes_project 5 65850818 65853127 - TEC TEC MGP_LPJ_T0001566.1 MGP_LPJ_G0001480.1 mouse_genomes_project 5 43645455 43646203 - TEC TEC MGP_LPJ_T0074508.1 MGP_LPJ_G0030049.1 mouse_genomes_project 5 135016853 135541116 + MGP_LPJ_P0074508 Caln1 protein_coding protein_coding MGP_LPJ_T0074511.1 MGP_LPJ_G0030049.1 mouse_genomes_project 5 135032647 135165926 + MGP_LPJ_P0074511 Caln1 protein_coding protein_coding MGP_LPJ_T0074512.1 MGP_LPJ_G0030049.1 mouse_genomes_project 5 135103926 135293291 + MGP_LPJ_P0074512 Caln1 protein_coding protein_coding MGP_LPJ_T0074513.1 MGP_LPJ_G0030049.1 mouse_genomes_project 5 135104483 135541578 + MGP_LPJ_P0074513 Caln1 protein_coding protein_coding MGP_LPJ_T0074514.1 MGP_LPJ_G0030049.1 mouse_genomes_project 5 135105278 135550168 + MGP_LPJ_P0074514 Caln1 protein_coding protein_coding MGP_LPJ_T0008088.1 MGP_LPJ_G0006599.1 mouse_genomes_project 5 26360727 26412967 - Gm26608 lincRNA lincRNA MGP_LPJ_T0008089.1 MGP_LPJ_G0006599.1 mouse_genomes_project 5 26398111 26399619 - Gm26608 lincRNA lincRNA MGP_LPJ_T0015085.1 MGP_LPJ_G0013176.1 mouse_genomes_project 5 117526090 117526523 - processed_pseudogene processed_pseudogene MGP_LPJ_T0073231.1 MGP_LPJ_G0029820.1 mouse_genomes_project 5 116731720 116734529 + Wscd2 protein_coding retained_intron MGP_LPJ_T0073232.1 MGP_LPJ_G0029820.1 mouse_genomes_project 5 116731834 116823487 + MGP_LPJ_P0073232 Wscd2 protein_coding protein_coding MGP_LPJ_T0073233.1 MGP_LPJ_G0029820.1 mouse_genomes_project 5 116732139 116788546 + Wscd2 protein_coding retained_intron MGP_LPJ_T0073234.1 MGP_LPJ_G0029820.1 mouse_genomes_project 5 116783946 116790471 + Wscd2 protein_coding retained_intron MGP_LPJ_T0073235.1 MGP_LPJ_G0029820.1 mouse_genomes_project 5 116804879 116823480 + Wscd2 protein_coding processed_transcript MGP_LPJ_T0073236.1 MGP_LPJ_G0029820.1 mouse_genomes_project 5 116812727 116815813 + Wscd2 protein_coding processed_transcript MGP_LPJ_T0004671.1 MGP_LPJ_G0004046.1 mouse_genomes_project 5 22854478 22862262 - Gm26648 antisense antisense MGP_LPJ_T0071586.1 MGP_LPJ_G0029472.1 mouse_genomes_project 5 65238717 65275800 + MGP_LPJ_P0071586 Klhl5 protein_coding protein_coding MGP_LPJ_T0071587.1 MGP_LPJ_G0029472.1 mouse_genomes_project 5 65238793 65241224 + Klhl5 protein_coding retained_intron MGP_LPJ_T0071588.1 MGP_LPJ_G0029472.1 mouse_genomes_project 5 65239038 65274685 + MGP_LPJ_P0071588 Klhl5 protein_coding protein_coding MGP_LPJ_T0071589.1 MGP_LPJ_G0029472.1 mouse_genomes_project 5 65239044 65242174 + Klhl5 protein_coding processed_transcript MGP_LPJ_T0071590.1 MGP_LPJ_G0029472.1 mouse_genomes_project 5 65239312 65261314 + Klhl5 protein_coding processed_transcript MGP_LPJ_T0071591.1 MGP_LPJ_G0029472.1 mouse_genomes_project 5 65263753 65275800 + MGP_LPJ_P0071591 Klhl5 protein_coding nonsense_mediated_decay MGP_LPJ_T0014862.1 MGP_LPJ_G0012953.1 mouse_genomes_project 5 24191153 24192167 + processed_pseudogene processed_pseudogene MGP_LPJ_T0074980.1 MGP_LPJ_G0030131.1 mouse_genomes_project 5 142704743 142707540 - MGP_LPJ_P0074980 Epo protein_coding protein_coding MGP_LPJ_T0074981.1 MGP_LPJ_G0030131.1 mouse_genomes_project 5 142704743 142758956 - MGP_LPJ_P0074981 Epo protein_coding protein_coding MGP_LPJ_T0074982.1 MGP_LPJ_G0030131.1 mouse_genomes_project 5 142704749 142707540 - MGP_LPJ_P0074982 Epo protein_coding protein_coding MGP_LPJ_T0070748.1 MGP_LPJ_G0029331.1 mouse_genomes_project 5 30103372 30120513 - Rbks protein_coding processed_transcript MGP_LPJ_T0070749.1 MGP_LPJ_G0029331.1 mouse_genomes_project 5 30103372 30177593 - MGP_LPJ_P0070749 Rbks protein_coding protein_coding MGP_LPJ_T0070752.1 MGP_LPJ_G0029331.1 mouse_genomes_project 5 30140041 30166073 - Rbks protein_coding processed_transcript MGP_LPJ_T0001486.1 MGP_LPJ_G0001403.1 mouse_genomes_project 5 11858703 11861595 + TEC TEC MGP_LPJ_T0001863.1 MGP_LPJ_G0001774.1 mouse_genomes_project 5 133051042 133052462 + TEC TEC MGP_LPJ_T0099596.1 MGP_LPJ_G0037859.1 mouse_genomes_project 5 94596139 94596247 - Gm25521 snRNA snRNA MGP_LPJ_T0073245.1 MGP_LPJ_G0029824.1 mouse_genomes_project 5 116989295 117020438 - MGP_LPJ_P0073245 Sart3 protein_coding protein_coding MGP_LPJ_T0073246.1 MGP_LPJ_G0029824.1 mouse_genomes_project 5 116989297 117019618 - MGP_LPJ_P0073246 Sart3 protein_coding nonsense_mediated_decay MGP_LPJ_T0073247.1 MGP_LPJ_G0029824.1 mouse_genomes_project 5 116991527 116992445 - Sart3 protein_coding retained_intron MGP_LPJ_T0073248.1 MGP_LPJ_G0029824.1 mouse_genomes_project 5 116992619 117002292 - Sart3 protein_coding processed_transcript MGP_LPJ_T0073249.1 MGP_LPJ_G0029824.1 mouse_genomes_project 5 117001083 117001607 - Sart3 protein_coding processed_transcript MGP_LPJ_T0073250.1 MGP_LPJ_G0029824.1 mouse_genomes_project 5 117001829 117005068 - Sart3 protein_coding retained_intron MGP_LPJ_T0073251.1 MGP_LPJ_G0029824.1 mouse_genomes_project 5 117002256 117008062 - Sart3 protein_coding processed_transcript MGP_LPJ_T0070497.1 MGP_LPJ_G0029295.1 mouse_genomes_project 5 29124674 29213807 + MGP_LPJ_P0070497 Dpysl5 protein_coding protein_coding MGP_LPJ_T0070498.1 MGP_LPJ_G0029295.1 mouse_genomes_project 5 29124692 29216854 + MGP_LPJ_P0070498 Dpysl5 protein_coding protein_coding MGP_LPJ_T0070499.1 MGP_LPJ_G0029295.1 mouse_genomes_project 5 29124699 29164193 + MGP_LPJ_P0070499 Dpysl5 protein_coding protein_coding MGP_LPJ_T0070500.1 MGP_LPJ_G0029295.1 mouse_genomes_project 5 29190775 29202819 + Dpysl5 protein_coding processed_transcript MGP_LPJ_T0070501.1 MGP_LPJ_G0029295.1 mouse_genomes_project 5 29204022 29213793 + Dpysl5 protein_coding retained_intron MGP_LPJ_T0070502.1 MGP_LPJ_G0029295.1 mouse_genomes_project 5 29209509 29213899 + Dpysl5 protein_coding retained_intron MGP_LPJ_T0070503.1 MGP_LPJ_G0029295.1 mouse_genomes_project 5 29211208 29214046 + Dpysl5 protein_coding retained_intron MGP_LPJ_T0015118.1 MGP_LPJ_G0013209.1 mouse_genomes_project 5 142384784 142394671 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004691.1 MGP_LPJ_G0004063.1 mouse_genomes_project 5 33712698 33714274 - Gm43791 antisense antisense MGP_LPJ_T0014908.1 MGP_LPJ_G0012999.1 mouse_genomes_project 5 40435840 40436309 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010742.1 MGP_LPJ_G0008860.1 mouse_genomes_project 5 140748322 140748406 - Mir7034 miRNA miRNA MGP_LPJ_T0071854.1 MGP_LPJ_G0029515.1 mouse_genomes_project 5 73044150 73067438 + MGP_LPJ_P0071854 Nipal1 protein_coding protein_coding MGP_LPJ_T0071855.1 MGP_LPJ_G0029515.1 mouse_genomes_project 5 73044168 73063979 + MGP_LPJ_P0071855 Nipal1 protein_coding protein_coding MGP_LPJ_T0071856.1 MGP_LPJ_G0029515.1 mouse_genomes_project 5 73044197 73055491 + Nipal1 protein_coding retained_intron MGP_LPJ_T0014942.1 MGP_LPJ_G0013033.1 mouse_genomes_project 5 58818063 58819017 + processed_pseudogene processed_pseudogene MGP_LPJ_T0075484.1 MGP_LPJ_G0030235.1 mouse_genomes_project 5 149393844 149439504 + MGP_LPJ_P0075484 Daglb protein_coding protein_coding MGP_LPJ_T0075485.1 MGP_LPJ_G0030235.1 mouse_genomes_project 5 149393873 149405624 + Daglb protein_coding retained_intron MGP_LPJ_T0075486.1 MGP_LPJ_G0030235.1 mouse_genomes_project 5 149402878 149408185 + Daglb protein_coding retained_intron MGP_LPJ_T0075487.1 MGP_LPJ_G0030235.1 mouse_genomes_project 5 149418493 149421825 + Daglb protein_coding retained_intron MGP_LPJ_T0070916.1 MGP_LPJ_G0029358.1 mouse_genomes_project 5 32633415 32639799 - Poln protein_coding processed_transcript MGP_LPJ_T0070917.1 MGP_LPJ_G0029358.1 mouse_genomes_project 5 32633425 32670784 - Poln protein_coding processed_transcript MGP_LPJ_T0070918.1 MGP_LPJ_G0029358.1 mouse_genomes_project 5 32633434 32801587 - MGP_LPJ_P0070918 Poln protein_coding protein_coding MGP_LPJ_T0070919.1 MGP_LPJ_G0029358.1 mouse_genomes_project 5 32633434 32801587 - MGP_LPJ_P0070919 Poln protein_coding protein_coding MGP_LPJ_T0070920.1 MGP_LPJ_G0029358.1 mouse_genomes_project 5 32633519 32801565 - MGP_LPJ_P0070920 Poln protein_coding protein_coding MGP_LPJ_T0070921.1 MGP_LPJ_G0029358.1 mouse_genomes_project 5 32640589 32731575 - Poln protein_coding processed_transcript MGP_LPJ_T0070922.1 MGP_LPJ_G0029358.1 mouse_genomes_project 5 32658333 32731515 - Poln protein_coding processed_transcript MGP_LPJ_T0070923.1 MGP_LPJ_G0029358.1 mouse_genomes_project 5 32727470 32731591 - Poln protein_coding retained_intron MGP_LPJ_T0010722.1 MGP_LPJ_G0008840.1 mouse_genomes_project 5 113696473 113696540 - Mir7026 miRNA miRNA MGP_LPJ_T0015105.1 MGP_LPJ_G0013196.1 mouse_genomes_project 5 128833780 128834144 + processed_pseudogene processed_pseudogene MGP_LPJ_T0072152.1 MGP_LPJ_G0029564.1 mouse_genomes_project 5 87237192 87299962 - MGP_LPJ_P0072152 Cenpc1 protein_coding protein_coding MGP_LPJ_T0072153.1 MGP_LPJ_G0029564.1 mouse_genomes_project 5 87237426 87300122 - MGP_LPJ_P0072153 Cenpc1 protein_coding unknown_likely_coding MGP_LPJ_T0072154.1 MGP_LPJ_G0029564.1 mouse_genomes_project 5 87277279 87299930 - Cenpc1 protein_coding retained_intron MGP_LPJ_T0072155.1 MGP_LPJ_G0029564.1 mouse_genomes_project 5 87277280 87299926 - Cenpc1 protein_coding retained_intron MGP_LPJ_T0072156.1 MGP_LPJ_G0029564.1 mouse_genomes_project 5 87290654 87299901 - Cenpc1 protein_coding retained_intron MGP_LPJ_T0008179.1 MGP_LPJ_G0006666.1 mouse_genomes_project 5 74388569 74396085 + Gm43801 lincRNA lincRNA MGP_LPJ_T0072939.1 MGP_LPJ_G0029759.1 mouse_genomes_project 5 111274784 111297037 - MGP_LPJ_P0072939 Gak protein_coding protein_coding MGP_LPJ_T0072940.1 MGP_LPJ_G0029759.1 mouse_genomes_project 5 111274787 111337566 - MGP_LPJ_P0072940 Gak protein_coding protein_coding MGP_LPJ_T0072941.1 MGP_LPJ_G0029759.1 mouse_genomes_project 5 111274787 111337566 - MGP_LPJ_P0072941 Gak protein_coding nonsense_mediated_decay MGP_LPJ_T0072942.1 MGP_LPJ_G0029759.1 mouse_genomes_project 5 111274793 111337566 - MGP_LPJ_P0072942 Gak protein_coding nonsense_mediated_decay MGP_LPJ_T0072943.1 MGP_LPJ_G0029759.1 mouse_genomes_project 5 111275546 111277239 - Gak protein_coding retained_intron MGP_LPJ_T0072944.1 MGP_LPJ_G0029759.1 mouse_genomes_project 5 111276804 111337582 - MGP_LPJ_P0072944 Gak protein_coding nonsense_mediated_decay MGP_LPJ_T0072945.1 MGP_LPJ_G0029759.1 mouse_genomes_project 5 111277344 111282612 - Gak protein_coding processed_transcript MGP_LPJ_T0072946.1 MGP_LPJ_G0029759.1 mouse_genomes_project 5 111282268 111286325 - Gak protein_coding retained_intron MGP_LPJ_T0072947.1 MGP_LPJ_G0029759.1 mouse_genomes_project 5 111285445 111332921 - Gak protein_coding retained_intron MGP_LPJ_T0072948.1 MGP_LPJ_G0029759.1 mouse_genomes_project 5 111288462 111297073 - MGP_LPJ_P0072948 Gak protein_coding protein_coding MGP_LPJ_T0072949.1 MGP_LPJ_G0029759.1 mouse_genomes_project 5 111289738 111303742 - MGP_LPJ_P0072949 Gak protein_coding nonsense_mediated_decay MGP_LPJ_T0072950.1 MGP_LPJ_G0029759.1 mouse_genomes_project 5 111321514 111337250 - Gak protein_coding processed_transcript MGP_LPJ_T0072951.1 MGP_LPJ_G0029759.1 mouse_genomes_project 5 111331138 111337520 - MGP_LPJ_P0072951 Gak protein_coding nonsense_mediated_decay MGP_LPJ_T0010748.1 MGP_LPJ_G0008866.1 mouse_genomes_project 5 142492354 142492419 - Mir7036 miRNA miRNA MGP_LPJ_T0004675.1 MGP_LPJ_G0004050.1 mouse_genomes_project 5 26820471 27284393 + antisense antisense MGP_LPJ_T0004676.1 MGP_LPJ_G0004050.1 mouse_genomes_project 5 26829160 27053699 + antisense antisense MGP_LPJ_T0071967.1 MGP_LPJ_G0029534.1 mouse_genomes_project 5 75117353 75208998 - MGP_LPJ_P0071967 Lnx1 protein_coding protein_coding MGP_LPJ_T0071968.1 MGP_LPJ_G0029534.1 mouse_genomes_project 5 75117353 75208999 - MGP_LPJ_P0071968 Lnx1 protein_coding protein_coding MGP_LPJ_T0071969.1 MGP_LPJ_G0029534.1 mouse_genomes_project 5 75117353 75218269 - MGP_LPJ_P0071969 Lnx1 protein_coding protein_coding MGP_LPJ_T0071970.1 MGP_LPJ_G0029534.1 mouse_genomes_project 5 75117585 75208984 - MGP_LPJ_P0071970 Lnx1 protein_coding nonsense_mediated_decay MGP_LPJ_T0071972.1 MGP_LPJ_G0029534.1 mouse_genomes_project 5 75122006 75208755 - MGP_LPJ_P0071972 Lnx1 protein_coding protein_coding MGP_LPJ_T0071973.1 MGP_LPJ_G0029534.1 mouse_genomes_project 5 75122006 75208926 - MGP_LPJ_P0071973 Lnx1 protein_coding protein_coding MGP_LPJ_T0071974.1 MGP_LPJ_G0029534.1 mouse_genomes_project 5 75122006 75235235 - MGP_LPJ_P0071974 Lnx1 protein_coding protein_coding MGP_LPJ_T0071975.1 MGP_LPJ_G0029534.1 mouse_genomes_project 5 75122006 75208999 - MGP_LPJ_P0071975 Lnx1 protein_coding protein_coding MGP_LPJ_T0071976.1 MGP_LPJ_G0029534.1 mouse_genomes_project 5 75122678 75149057 - MGP_LPJ_P0071976 Lnx1 protein_coding protein_coding MGP_LPJ_T0072272.1 MGP_LPJ_G0029605.1 mouse_genomes_project 5 89715448 89727340 + MGP_LPJ_P0072272 Prol1 protein_coding protein_coding MGP_LPJ_T0073525.1 MGP_LPJ_G0029876.1 mouse_genomes_project 5 119099557 119116060 + MGP_LPJ_P0073525 Rab35 protein_coding protein_coding MGP_LPJ_T0073526.1 MGP_LPJ_G0029876.1 mouse_genomes_project 5 119099780 119114443 + MGP_LPJ_P0073526 Rab35 protein_coding nonsense_mediated_decay MGP_LPJ_T0070432.1 MGP_LPJ_G0029282.1 mouse_genomes_project 5 28530302 28536823 - MGP_LPJ_P0070432 3110082J24Rik protein_coding protein_coding MGP_LPJ_T0070433.1 MGP_LPJ_G0029282.1 mouse_genomes_project 5 28530607 28536096 - MGP_LPJ_P0070433 3110082J24Rik protein_coding protein_coding MGP_LPJ_T0008185.1 MGP_LPJ_G0006671.1 mouse_genomes_project 5 75484076 75500976 + Gm6116 lincRNA lincRNA MGP_LPJ_T0073371.1 MGP_LPJ_G0029846.1 mouse_genomes_project 5 118066796 118125219 - MGP_LPJ_P0073371 Git2 protein_coding protein_coding MGP_LPJ_T0073372.1 MGP_LPJ_G0029846.1 mouse_genomes_project 5 118066797 118125216 - MGP_LPJ_P0073372 Git2 protein_coding protein_coding MGP_LPJ_T0073373.1 MGP_LPJ_G0029846.1 mouse_genomes_project 5 118066800 118125158 - MGP_LPJ_P0073373 Git2 protein_coding protein_coding MGP_LPJ_T0073374.1 MGP_LPJ_G0029846.1 mouse_genomes_project 5 118066800 118125216 - MGP_LPJ_P0073374 Git2 protein_coding protein_coding MGP_LPJ_T0073375.1 MGP_LPJ_G0029846.1 mouse_genomes_project 5 118066800 118085572 - MGP_LPJ_P0073375 Git2 protein_coding protein_coding MGP_LPJ_T0073376.1 MGP_LPJ_G0029846.1 mouse_genomes_project 5 118070022 118125186 - MGP_LPJ_P0073376 Git2 protein_coding protein_coding MGP_LPJ_T0073377.1 MGP_LPJ_G0029846.1 mouse_genomes_project 5 118070317 118125219 - MGP_LPJ_P0073377 Git2 protein_coding protein_coding MGP_LPJ_T0073378.1 MGP_LPJ_G0029846.1 mouse_genomes_project 5 118073663 118074614 - Git2 protein_coding processed_transcript MGP_LPJ_T0073379.1 MGP_LPJ_G0029846.1 mouse_genomes_project 5 118074311 118089940 - MGP_LPJ_P0073379 Git2 protein_coding protein_coding MGP_LPJ_T0073380.1 MGP_LPJ_G0029846.1 mouse_genomes_project 5 118078793 118083066 - Git2 protein_coding retained_intron MGP_LPJ_T0073381.1 MGP_LPJ_G0029846.1 mouse_genomes_project 5 118088989 118125219 - Git2 protein_coding retained_intron MGP_LPJ_T0073382.1 MGP_LPJ_G0029846.1 mouse_genomes_project 5 118089877 118110475 - MGP_LPJ_P0073382 Git2 protein_coding protein_coding MGP_LPJ_T0073383.1 MGP_LPJ_G0029846.1 mouse_genomes_project 5 118098199 118105637 - Git2 protein_coding retained_intron MGP_LPJ_T0073384.1 MGP_LPJ_G0029846.1 mouse_genomes_project 5 118108302 118121475 - MGP_LPJ_P0073384 Git2 protein_coding protein_coding MGP_LPJ_T0073385.1 MGP_LPJ_G0029846.1 mouse_genomes_project 5 118108406 118125219 - Git2 protein_coding processed_transcript MGP_LPJ_T0073386.1 MGP_LPJ_G0029846.1 mouse_genomes_project 5 118108493 118111102 - Git2 protein_coding processed_transcript MGP_LPJ_T0073387.1 MGP_LPJ_G0029846.1 mouse_genomes_project 5 118109626 118125191 - Git2 protein_coding retained_intron MGP_LPJ_T0014900.1 MGP_LPJ_G0012991.1 mouse_genomes_project 5 36114048 36114199 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010760.1 MGP_LPJ_G0008878.1 mouse_genomes_project 5 150870662 150870747 - Mir7039 miRNA miRNA MGP_LPJ_T0001599.1 MGP_LPJ_G0001513.1 mouse_genomes_project 5 48311279 48312611 - TEC TEC MGP_LPJ_T0072456.1 MGP_LPJ_G0029652.1 mouse_genomes_project 5 93974662 93994792 - MGP_LPJ_P0072456 Nup54 protein_coding protein_coding MGP_LPJ_T0072457.1 MGP_LPJ_G0029652.1 mouse_genomes_project 5 93981396 93983351 - Nup54 protein_coding retained_intron MGP_LPJ_T0072458.1 MGP_LPJ_G0029652.1 mouse_genomes_project 5 93984169 93994118 - Nup54 protein_coding processed_transcript MGP_LPJ_T0072459.1 MGP_LPJ_G0029652.1 mouse_genomes_project 5 93986444 93994664 - Nup54 protein_coding retained_intron MGP_LPJ_T0072460.1 MGP_LPJ_G0029652.1 mouse_genomes_project 5 93986715 93994687 - MGP_LPJ_P0072460 Nup54 protein_coding nonsense_mediated_decay MGP_LPJ_T0072461.1 MGP_LPJ_G0029652.1 mouse_genomes_project 5 93990556 93994696 - MGP_LPJ_P0072461 Nup54 protein_coding protein_coding MGP_LPJ_T0072462.1 MGP_LPJ_G0029652.1 mouse_genomes_project 5 93990564 93994330 - MGP_LPJ_P0072462 Nup54 protein_coding protein_coding MGP_LPJ_T0101344.1 MGP_LPJ_G0039550.1 mouse_genomes_project 5 20504783 20505176 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0101345.1 MGP_LPJ_G0039550.1 mouse_genomes_project 5 20504800 20505701 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0074923.1 MGP_LPJ_G0030119.1 mouse_genomes_project 5 142183086 142194342 - MGP_LPJ_P0074923 Ap1s1 protein_coding protein_coding MGP_LPJ_T0074924.1 MGP_LPJ_G0030119.1 mouse_genomes_project 5 142183435 142185787 - Ap1s1 protein_coding retained_intron MGP_LPJ_T0074925.1 MGP_LPJ_G0030119.1 mouse_genomes_project 5 142185515 142194002 - MGP_LPJ_P0074925 Ap1s1 protein_coding protein_coding MGP_LPJ_T0074926.1 MGP_LPJ_G0030119.1 mouse_genomes_project 5 142185532 142194249 - MGP_LPJ_P0074926 Ap1s1 protein_coding protein_coding MGP_LPJ_T0074927.1 MGP_LPJ_G0030119.1 mouse_genomes_project 5 142191163 142193614 - MGP_LPJ_P0074927 Ap1s1 protein_coding protein_coding MGP_LPJ_T0015048.1 MGP_LPJ_G0013139.1 mouse_genomes_project 5 107031061 107100355 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001680.1 MGP_LPJ_G0001593.1 mouse_genomes_project 5 66657437 66659647 - TEC TEC MGP_LPJ_T0102198.1 MGP_LPJ_G0040235.1 mouse_genomes_project 5 149040900 149041839 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0075587.1 MGP_LPJ_G0030257.1 mouse_genomes_project 5 150965227 150996339 - MGP_LPJ_P0075587 Kpna7 protein_coding protein_coding MGP_LPJ_T0075588.1 MGP_LPJ_G0030257.1 mouse_genomes_project 5 150965436 150995326 - MGP_LPJ_P0075588 Kpna7 protein_coding protein_coding MGP_LPJ_T0075589.1 MGP_LPJ_G0030257.1 mouse_genomes_project 5 150967398 150993742 - MGP_LPJ_P0075589 Kpna7 protein_coding protein_coding MGP_LPJ_T0075590.1 MGP_LPJ_G0030257.1 mouse_genomes_project 5 150977966 150990393 - Kpna7 protein_coding processed_transcript MGP_LPJ_T0075591.1 MGP_LPJ_G0030257.1 mouse_genomes_project 5 150986923 150995101 - MGP_LPJ_P0075591 Kpna7 protein_coding protein_coding MGP_LPJ_T0075592.1 MGP_LPJ_G0030257.1 mouse_genomes_project 5 150992991 151088118 - MGP_LPJ_P0075592 Kpna7 protein_coding protein_coding MGP_LPJ_T0072407.1 MGP_LPJ_G0029644.1 mouse_genomes_project 5 93665831 93736494 + MGP_LPJ_P0072407 Uso1 protein_coding protein_coding MGP_LPJ_T0072408.1 MGP_LPJ_G0029644.1 mouse_genomes_project 5 93665839 93736497 + MGP_LPJ_P0072408 Uso1 protein_coding protein_coding MGP_LPJ_T0072409.1 MGP_LPJ_G0029644.1 mouse_genomes_project 5 93665840 93716361 + Uso1 protein_coding retained_intron MGP_LPJ_T0072410.1 MGP_LPJ_G0029644.1 mouse_genomes_project 5 93665859 93736495 + MGP_LPJ_P0072410 Uso1 protein_coding nonsense_mediated_decay MGP_LPJ_T0072411.1 MGP_LPJ_G0029644.1 mouse_genomes_project 5 93713694 93736474 + Uso1 protein_coding processed_transcript MGP_LPJ_T0010755.1 MGP_LPJ_G0008873.1 mouse_genomes_project 5 145396265 145396330 - Mir7037 miRNA miRNA MGP_LPJ_T0015072.1 MGP_LPJ_G0013163.1 mouse_genomes_project 5 112046260 112048145 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001588.1 MGP_LPJ_G0001502.1 mouse_genomes_project 5 47984619 47988421 - TEC TEC MGP_LPJ_T0073164.1 MGP_LPJ_G0029806.1 mouse_genomes_project 5 115481415 115484047 - Srrd protein_coding processed_transcript MGP_LPJ_T0073165.1 MGP_LPJ_G0029806.1 mouse_genomes_project 5 115481415 115487045 - MGP_LPJ_P0073165 Srrd protein_coding protein_coding MGP_LPJ_T0073166.1 MGP_LPJ_G0029806.1 mouse_genomes_project 5 115481415 115487065 - MGP_LPJ_P0073166 Srrd protein_coding protein_coding MGP_LPJ_T0073167.1 MGP_LPJ_G0029806.1 mouse_genomes_project 5 115481932 115483957 - Srrd protein_coding retained_intron MGP_LPJ_T0073168.1 MGP_LPJ_G0029806.1 mouse_genomes_project 5 115481995 115487043 - Srrd protein_coding processed_transcript MGP_LPJ_T0073169.1 MGP_LPJ_G0029806.1 mouse_genomes_project 5 115483743 115484244 - Srrd protein_coding processed_transcript MGP_LPJ_T0014982.1 MGP_LPJ_G0013073.1 mouse_genomes_project 5 75586259 75587778 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004649.1 MGP_LPJ_G0004028.1 mouse_genomes_project 5 321393 330832 - Gm17590 antisense antisense MGP_LPJ_T0004650.1 MGP_LPJ_G0004028.1 mouse_genomes_project 5 321603 321711 - Gm17590 antisense antisense MGP_LPJ_T0073748.1 MGP_LPJ_G0029924.1 mouse_genomes_project 5 125106088 125172590 - MGP_LPJ_P0073748 Ptpn11 protein_coding protein_coding MGP_LPJ_T0073749.1 MGP_LPJ_G0029924.1 mouse_genomes_project 5 125106090 125172560 - Ptpn11 protein_coding retained_intron MGP_LPJ_T0073750.1 MGP_LPJ_G0029924.1 mouse_genomes_project 5 125106096 125172522 - MGP_LPJ_P0073750 Ptpn11 protein_coding protein_coding MGP_LPJ_T0073751.1 MGP_LPJ_G0029924.1 mouse_genomes_project 5 125109395 125121703 - Ptpn11 protein_coding processed_transcript MGP_LPJ_T0008153.1 MGP_LPJ_G0006647.1 mouse_genomes_project 5 58155994 58166237 - 4930459L07Rik lincRNA lincRNA MGP_LPJ_T0070663.1 MGP_LPJ_G0029320.1 mouse_genomes_project 5 29687013 29697718 + MGP_LPJ_P0070663 Nrbp1 protein_coding protein_coding MGP_LPJ_T0070664.1 MGP_LPJ_G0029320.1 mouse_genomes_project 5 29687013 29697712 + MGP_LPJ_P0070664 Nrbp1 protein_coding protein_coding MGP_LPJ_T0070665.1 MGP_LPJ_G0029320.1 mouse_genomes_project 5 29687026 29691101 + MGP_LPJ_P0070665 Nrbp1 protein_coding protein_coding MGP_LPJ_T0070666.1 MGP_LPJ_G0029320.1 mouse_genomes_project 5 29687044 29691987 + Nrbp1 protein_coding retained_intron MGP_LPJ_T0070667.1 MGP_LPJ_G0029320.1 mouse_genomes_project 5 29687052 29691022 + MGP_LPJ_P0070667 Nrbp1 protein_coding protein_coding MGP_LPJ_T0070668.1 MGP_LPJ_G0029320.1 mouse_genomes_project 5 29687081 29694066 + MGP_LPJ_P0070668 Nrbp1 protein_coding protein_coding MGP_LPJ_T0070669.1 MGP_LPJ_G0029320.1 mouse_genomes_project 5 29689567 29690576 + Nrbp1 protein_coding retained_intron MGP_LPJ_T0070670.1 MGP_LPJ_G0029320.1 mouse_genomes_project 5 29693574 29696133 + Nrbp1 protein_coding retained_intron MGP_LPJ_T0070671.1 MGP_LPJ_G0029320.1 mouse_genomes_project 5 29695506 29697715 + Nrbp1 protein_coding retained_intron MGP_LPJ_T0070672.1 MGP_LPJ_G0029320.1 mouse_genomes_project 5 29695742 29696885 + Nrbp1 protein_coding retained_intron MGP_LPJ_T0070673.1 MGP_LPJ_G0029320.1 mouse_genomes_project 5 29696496 29697601 + Nrbp1 protein_coding retained_intron MGP_LPJ_T0001494.1 MGP_LPJ_G0001411.1 mouse_genomes_project 5 13867599 13870251 + TEC TEC MGP_LPJ_T0074370.1 MGP_LPJ_G0030023.1 mouse_genomes_project 5 133249596 133292915 + MGP_LPJ_P0074370 Piwil1 protein_coding protein_coding MGP_LPJ_T0074371.1 MGP_LPJ_G0030023.1 mouse_genomes_project 5 133281721 133301020 + MGP_LPJ_P0074371 Piwil1 protein_coding protein_coding MGP_LPJ_T0074372.1 MGP_LPJ_G0030023.1 mouse_genomes_project 5 133283037 133300147 + MGP_LPJ_P0074372 Piwil1 protein_coding protein_coding MGP_LPJ_T0075907.1 MGP_LPJ_G0030320.1 mouse_genomes_project 5 157666885 157826856 - MGP_LPJ_P0075907 Stard13 protein_coding protein_coding MGP_LPJ_T0075908.1 MGP_LPJ_G0030320.1 mouse_genomes_project 5 157668913 157826756 - MGP_LPJ_P0075908 Stard13 protein_coding protein_coding MGP_LPJ_T0075909.1 MGP_LPJ_G0030320.1 mouse_genomes_project 5 157692708 157826862 - Stard13 protein_coding processed_transcript MGP_LPJ_T0075910.1 MGP_LPJ_G0030320.1 mouse_genomes_project 5 157692809 157718528 - Stard13 protein_coding processed_transcript MGP_LPJ_T0075912.1 MGP_LPJ_G0030320.1 mouse_genomes_project 5 157692812 157876352 - MGP_LPJ_P0075912 Stard13 protein_coding protein_coding MGP_LPJ_T0075913.1 MGP_LPJ_G0030320.1 mouse_genomes_project 5 157692859 157724830 - Stard13 protein_coding processed_transcript MGP_LPJ_T0075914.1 MGP_LPJ_G0030320.1 mouse_genomes_project 5 157700425 157826812 - Stard13 protein_coding retained_intron MGP_LPJ_T0075915.1 MGP_LPJ_G0030320.1 mouse_genomes_project 5 157702465 157876414 - MGP_LPJ_P0075915 Stard13 protein_coding protein_coding MGP_LPJ_T0075916.1 MGP_LPJ_G0030320.1 mouse_genomes_project 5 157724503 157737808 - Stard13 protein_coding processed_transcript MGP_LPJ_T0008051.1 MGP_LPJ_G0006574.1 mouse_genomes_project 5 2066074 2831552 + lincRNA lincRNA MGP_LPJ_T0099556.1 MGP_LPJ_G0037819.1 mouse_genomes_project 5 20510960 20511067 - Gm22887 snRNA snRNA MGP_LPJ_T0079918.1 MGP_LPJ_G0031179.1 mouse_genomes_project 6 128495149 128523369 + Zfp384 protein_coding retained_intron MGP_LPJ_T0079919.1 MGP_LPJ_G0031179.1 mouse_genomes_project 6 128495183 128524838 + MGP_LPJ_P0079919 Zfp384 protein_coding protein_coding MGP_LPJ_T0079920.1 MGP_LPJ_G0031179.1 mouse_genomes_project 6 128495231 128524838 + Zfp384 protein_coding retained_intron MGP_LPJ_T0079921.1 MGP_LPJ_G0031179.1 mouse_genomes_project 6 128495242 128525066 + MGP_LPJ_P0079921 Zfp384 protein_coding protein_coding MGP_LPJ_T0079922.1 MGP_LPJ_G0031179.1 mouse_genomes_project 6 128495281 128519099 + Zfp384 protein_coding processed_transcript MGP_LPJ_T0079923.1 MGP_LPJ_G0031179.1 mouse_genomes_project 6 128495288 128524961 + MGP_LPJ_P0079923 Zfp384 protein_coding protein_coding MGP_LPJ_T0079924.1 MGP_LPJ_G0031179.1 mouse_genomes_project 6 128495675 128525071 + MGP_LPJ_P0079924 Zfp384 protein_coding protein_coding MGP_LPJ_T0079925.1 MGP_LPJ_G0031179.1 mouse_genomes_project 6 128495719 128510830 + Zfp384 protein_coding processed_transcript MGP_LPJ_T0079926.1 MGP_LPJ_G0031179.1 mouse_genomes_project 6 128495721 128510976 + MGP_LPJ_P0079926 Zfp384 protein_coding protein_coding MGP_LPJ_T0079927.1 MGP_LPJ_G0031179.1 mouse_genomes_project 6 128495741 128524838 + MGP_LPJ_P0079927 Zfp384 protein_coding protein_coding MGP_LPJ_T0079928.1 MGP_LPJ_G0031179.1 mouse_genomes_project 6 128495742 128524838 + MGP_LPJ_P0079928 Zfp384 protein_coding protein_coding MGP_LPJ_T0079929.1 MGP_LPJ_G0031179.1 mouse_genomes_project 6 128495751 128519982 + Zfp384 protein_coding retained_intron MGP_LPJ_T0079930.1 MGP_LPJ_G0031179.1 mouse_genomes_project 6 128495811 128524838 + MGP_LPJ_P0079930 Zfp384 protein_coding protein_coding MGP_LPJ_T0079931.1 MGP_LPJ_G0031179.1 mouse_genomes_project 6 128496398 128524838 + MGP_LPJ_P0079931 Zfp384 protein_coding protein_coding MGP_LPJ_T0079932.1 MGP_LPJ_G0031179.1 mouse_genomes_project 6 128510849 128519978 + Zfp384 protein_coding retained_intron MGP_LPJ_T0079933.1 MGP_LPJ_G0031179.1 mouse_genomes_project 6 128517598 128525018 + Zfp384 protein_coding retained_intron MGP_LPJ_T0077485.1 MGP_LPJ_G0030677.1 mouse_genomes_project 6 54791841 54838610 + MGP_LPJ_P0077485 Adcyap1r1 protein_coding protein_coding MGP_LPJ_T0077486.1 MGP_LPJ_G0030677.1 mouse_genomes_project 6 54791891 54841149 + MGP_LPJ_P0077486 Adcyap1r1 protein_coding protein_coding MGP_LPJ_T0077487.1 MGP_LPJ_G0030677.1 mouse_genomes_project 6 54791920 54817931 + MGP_LPJ_P0077487 Adcyap1r1 protein_coding protein_coding MGP_LPJ_T0077488.1 MGP_LPJ_G0030677.1 mouse_genomes_project 6 54792040 54800076 + MGP_LPJ_P0077488 Adcyap1r1 protein_coding protein_coding MGP_LPJ_T0077489.1 MGP_LPJ_G0030677.1 mouse_genomes_project 6 54800066 54836876 + MGP_LPJ_P0077489 Adcyap1r1 protein_coding protein_coding MGP_LPJ_T0077490.1 MGP_LPJ_G0030677.1 mouse_genomes_project 6 54800066 54836876 + MGP_LPJ_P0077490 Adcyap1r1 protein_coding protein_coding MGP_LPJ_T0077491.1 MGP_LPJ_G0030677.1 mouse_genomes_project 6 54800066 54837133 + MGP_LPJ_P0077491 Adcyap1r1 protein_coding protein_coding MGP_LPJ_T0077492.1 MGP_LPJ_G0030677.1 mouse_genomes_project 6 54800066 54836876 + MGP_LPJ_P0077492 Adcyap1r1 protein_coding protein_coding MGP_LPJ_T0008796.1 MGP_LPJ_G0007104.1 mouse_genomes_project 6 152876389 152888485 + 1700049E15Rik lincRNA lincRNA MGP_LPJ_T0008797.1 MGP_LPJ_G0007104.1 mouse_genomes_project 6 152880880 152888459 + 1700049E15Rik lincRNA lincRNA MGP_LPJ_T0077060.1 MGP_LPJ_G0030577.1 mouse_genomes_project 6 41771992 41772934 + MGP_LPJ_P0077060 Olfr435 protein_coding protein_coding MGP_LPJ_T0015560.1 MGP_LPJ_G0013651.1 mouse_genomes_project 6 131393745 131393971 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001998.1 MGP_LPJ_G0001908.1 mouse_genomes_project 6 44241577 44244817 + TEC TEC MGP_LPJ_T0008737.1 MGP_LPJ_G0007062.1 mouse_genomes_project 6 124185678 124205158 - Gm44148 lincRNA lincRNA MGP_LPJ_T0077619.1 MGP_LPJ_G0030725.1 mouse_genomes_project 6 60426406 60530333 - MGP_LPJ_P0077619 Snca protein_coding protein_coding MGP_LPJ_T0077620.1 MGP_LPJ_G0030725.1 mouse_genomes_project 6 60426410 60529482 - MGP_LPJ_P0077620 Snca protein_coding protein_coding MGP_LPJ_T0077621.1 MGP_LPJ_G0030725.1 mouse_genomes_project 6 60505093 60528034 - Snca protein_coding processed_transcript MGP_LPJ_T0077622.1 MGP_LPJ_G0030725.1 mouse_genomes_project 6 60513042 60529350 - Snca protein_coding retained_intron MGP_LPJ_T0011638.1 MGP_LPJ_G0009756.1 mouse_genomes_project 6 15039078 15039187 + Gm27762 misc_RNA misc_RNA MGP_LPJ_T0077737.1 MGP_LPJ_G0030753.1 mouse_genomes_project 6 71606699 71655800 - MGP_LPJ_P0077737 Smyd1 protein_coding protein_coding MGP_LPJ_T0077738.1 MGP_LPJ_G0030753.1 mouse_genomes_project 6 71606701 71655772 - MGP_LPJ_P0077738 Smyd1 protein_coding protein_coding MGP_LPJ_T0077739.1 MGP_LPJ_G0030753.1 mouse_genomes_project 6 71608876 71720787 - MGP_LPJ_P0077739 Smyd1 protein_coding protein_coding MGP_LPJ_T0077740.1 MGP_LPJ_G0030753.1 mouse_genomes_project 6 71609034 71610409 - MGP_LPJ_P0077740 Smyd1 protein_coding protein_coding MGP_LPJ_T0077741.1 MGP_LPJ_G0030753.1 mouse_genomes_project 6 71653123 71655751 - MGP_LPJ_P0077741 Smyd1 protein_coding protein_coding MGP_LPJ_T0077746.1 MGP_LPJ_G0030753.1 mouse_genomes_project 6 71709572 71720760 - MGP_LPJ_P0077746 Smyd1 protein_coding protein_coding MGP_LPJ_T0015263.1 MGP_LPJ_G0013354.1 mouse_genomes_project 6 40010783 40011230 - processed_pseudogene processed_pseudogene MGP_LPJ_T0080531.1 MGP_LPJ_G0031348.1 mouse_genomes_project 6 144278076 144287060 - MGP_LPJ_P0080531 Rergl protein_coding protein_coding MGP_LPJ_T0000326.1 MGP_LPJ_G0000264.1 mouse_genomes_project 6 68218295 68219059 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0079883.1 MGP_LPJ_G0031173.1 mouse_genomes_project 6 128342208 128368722 - MGP_LPJ_P0079883 Cd4 protein_coding protein_coding MGP_LPJ_T0079884.1 MGP_LPJ_G0031173.1 mouse_genomes_project 6 128347129 128350778 - Cd4 protein_coding processed_transcript MGP_LPJ_T0079885.1 MGP_LPJ_G0031173.1 mouse_genomes_project 6 128347229 128350995 - Cd4 protein_coding processed_transcript MGP_LPJ_T0079886.1 MGP_LPJ_G0031173.1 mouse_genomes_project 6 128347834 128368700 - Cd4 protein_coding retained_intron MGP_LPJ_T0079887.1 MGP_LPJ_G0031173.1 mouse_genomes_project 6 128359237 128368701 - Cd4 protein_coding retained_intron MGP_LPJ_T0078330.1 MGP_LPJ_G0030870.1 mouse_genomes_project 6 87702049 87713135 - MGP_LPJ_P0078330 Pcyox1 protein_coding protein_coding MGP_LPJ_T0078331.1 MGP_LPJ_G0030870.1 mouse_genomes_project 6 87704704 87713122 - MGP_LPJ_P0078331 Pcyox1 protein_coding protein_coding MGP_LPJ_T0078332.1 MGP_LPJ_G0030870.1 mouse_genomes_project 6 87705022 87708375 - MGP_LPJ_P0078332 Pcyox1 protein_coding protein_coding MGP_LPJ_T0078333.1 MGP_LPJ_G0030870.1 mouse_genomes_project 6 87707715 87713124 - MGP_LPJ_P0078333 Pcyox1 protein_coding protein_coding MGP_LPJ_T0078334.1 MGP_LPJ_G0030870.1 mouse_genomes_project 6 87710463 87712607 - Pcyox1 protein_coding retained_intron MGP_LPJ_T0078335.1 MGP_LPJ_G0030870.1 mouse_genomes_project 6 87711763 87713100 - Pcyox1 protein_coding retained_intron MGP_LPJ_T0080170.1 MGP_LPJ_G0031230.1 mouse_genomes_project 6 132363063 132663608 - MGP_LPJ_P0080170 protein_coding protein_coding MGP_LPJ_T0080171.1 MGP_LPJ_G0031230.1 mouse_genomes_project 6 132363162 132663704 - MGP_LPJ_P0080171 protein_coding protein_coding MGP_LPJ_T0080184.1 MGP_LPJ_G0031230.1 mouse_genomes_project 6 132644602 132663641 - MGP_LPJ_P0080184 protein_coding protein_coding MGP_LPJ_T0079605.1 MGP_LPJ_G0031110.1 mouse_genomes_project 6 123849646 123920181 - Mical3 protein_coding processed_transcript MGP_LPJ_T0079606.1 MGP_LPJ_G0031110.1 mouse_genomes_project 6 123849664 123898439 - MGP_LPJ_P0079606 Mical3 protein_coding unknown_likely_coding MGP_LPJ_T0079607.1 MGP_LPJ_G0031110.1 mouse_genomes_project 6 123852719 123878153 - Mical3 protein_coding processed_transcript MGP_LPJ_T0079608.1 MGP_LPJ_G0031110.1 mouse_genomes_project 6 123852763 123853473 - Mical3 protein_coding retained_intron MGP_LPJ_T0079609.1 MGP_LPJ_G0031110.1 mouse_genomes_project 6 123870209 123877241 - Mical3 protein_coding processed_transcript MGP_LPJ_T0079610.1 MGP_LPJ_G0031110.1 mouse_genomes_project 6 123877860 123920181 - Mical3 protein_coding processed_transcript MGP_LPJ_T0079611.1 MGP_LPJ_G0031110.1 mouse_genomes_project 6 123879529 123885671 - Mical3 protein_coding processed_transcript MGP_LPJ_T0079612.1 MGP_LPJ_G0031110.1 mouse_genomes_project 6 123913074 123939219 - MGP_LPJ_P0079612 Mical3 protein_coding protein_coding MGP_LPJ_T0079613.1 MGP_LPJ_G0031110.1 mouse_genomes_project 6 123924269 123998423 - MGP_LPJ_P0079613 Mical3 protein_coding protein_coding MGP_LPJ_T0079614.1 MGP_LPJ_G0031110.1 mouse_genomes_project 6 123924269 123998421 - MGP_LPJ_P0079614 Mical3 protein_coding nonsense_mediated_decay MGP_LPJ_T0079615.1 MGP_LPJ_G0031110.1 mouse_genomes_project 6 123924270 123939234 - MGP_LPJ_P0079615 Mical3 protein_coding protein_coding MGP_LPJ_T0079616.1 MGP_LPJ_G0031110.1 mouse_genomes_project 6 123933628 124029577 - Mical3 protein_coding retained_intron MGP_LPJ_T0079617.1 MGP_LPJ_G0031110.1 mouse_genomes_project 6 123933628 123939256 - Mical3 protein_coding processed_transcript MGP_LPJ_T0079618.1 MGP_LPJ_G0031110.1 mouse_genomes_project 6 123939177 124051779 - MGP_LPJ_P0079618 Mical3 protein_coding protein_coding MGP_LPJ_T0079619.1 MGP_LPJ_G0031110.1 mouse_genomes_project 6 123939356 123942730 - Mical3 protein_coding retained_intron MGP_LPJ_T0079620.1 MGP_LPJ_G0031110.1 mouse_genomes_project 6 123941717 123942376 - Mical3 protein_coding processed_transcript MGP_LPJ_T0079621.1 MGP_LPJ_G0031110.1 mouse_genomes_project 6 123945906 123947731 - Mical3 protein_coding retained_intron MGP_LPJ_T0015217.1 MGP_LPJ_G0013308.1 mouse_genomes_project 6 16197218 16197482 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102262.1 MGP_LPJ_G0040299.1 mouse_genomes_project 6 132766453 132766567 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0078284.1 MGP_LPJ_G0030860.1 mouse_genomes_project 6 87046595 87050349 - MGP_LPJ_P0078284 Nat8f5 protein_coding protein_coding MGP_LPJ_T0078244.1 MGP_LPJ_G0030850.1 mouse_genomes_project 6 86584316 86591081 + MGP_LPJ_P0078244 Noto protein_coding protein_coding MGP_LPJ_T0078245.1 MGP_LPJ_G0030850.1 mouse_genomes_project 6 86584498 86590489 + MGP_LPJ_P0078245 Noto protein_coding protein_coding MGP_LPJ_T0015629.1 MGP_LPJ_G0013720.1 mouse_genomes_project 6 154142222 154142393 - processed_pseudogene processed_pseudogene MGP_LPJ_T0080656.1 MGP_LPJ_G0031377.1 mouse_genomes_project 6 147982737 148075910 - MGP_LPJ_P0080656 C2cd5 protein_coding protein_coding MGP_LPJ_T0080657.1 MGP_LPJ_G0031377.1 mouse_genomes_project 6 147982737 148075910 - MGP_LPJ_P0080657 C2cd5 protein_coding protein_coding MGP_LPJ_T0080658.1 MGP_LPJ_G0031377.1 mouse_genomes_project 6 147982742 148075893 - MGP_LPJ_P0080658 C2cd5 protein_coding nonsense_mediated_decay MGP_LPJ_T0080659.1 MGP_LPJ_G0031377.1 mouse_genomes_project 6 147982745 148075570 - MGP_LPJ_P0080659 C2cd5 protein_coding protein_coding MGP_LPJ_T0080660.1 MGP_LPJ_G0031377.1 mouse_genomes_project 6 147983299 148075561 - MGP_LPJ_P0080660 C2cd5 protein_coding protein_coding MGP_LPJ_T0080661.1 MGP_LPJ_G0031377.1 mouse_genomes_project 6 147983550 148075874 - MGP_LPJ_P0080661 C2cd5 protein_coding protein_coding MGP_LPJ_T0080662.1 MGP_LPJ_G0031377.1 mouse_genomes_project 6 147983556 147985530 - C2cd5 protein_coding retained_intron MGP_LPJ_T0080663.1 MGP_LPJ_G0031377.1 mouse_genomes_project 6 147983754 148075808 - MGP_LPJ_P0080663 C2cd5 protein_coding protein_coding MGP_LPJ_T0080664.1 MGP_LPJ_G0031377.1 mouse_genomes_project 6 147990008 147993005 - C2cd5 protein_coding retained_intron MGP_LPJ_T0080665.1 MGP_LPJ_G0031377.1 mouse_genomes_project 6 148000110 148075910 - C2cd5 protein_coding retained_intron MGP_LPJ_T0080666.1 MGP_LPJ_G0031377.1 mouse_genomes_project 6 148016163 148042619 - MGP_LPJ_P0080666 C2cd5 protein_coding protein_coding MGP_LPJ_T0080667.1 MGP_LPJ_G0031377.1 mouse_genomes_project 6 148021506 148024823 - C2cd5 protein_coding retained_intron MGP_LPJ_T0080668.1 MGP_LPJ_G0031377.1 mouse_genomes_project 6 148046104 148075643 - C2cd5 protein_coding retained_intron MGP_LPJ_T0080669.1 MGP_LPJ_G0031377.1 mouse_genomes_project 6 148048177 148056941 - C2cd5 protein_coding processed_transcript MGP_LPJ_T0080670.1 MGP_LPJ_G0031377.1 mouse_genomes_project 6 148053499 148055462 - C2cd5 protein_coding retained_intron MGP_LPJ_T0080671.1 MGP_LPJ_G0031377.1 mouse_genomes_project 6 148053866 148075944 - MGP_LPJ_P0080671 C2cd5 protein_coding protein_coding MGP_LPJ_T0080672.1 MGP_LPJ_G0031377.1 mouse_genomes_project 6 148058579 148075881 - C2cd5 protein_coding retained_intron MGP_LPJ_T0015567.1 MGP_LPJ_G0013658.1 mouse_genomes_project 6 132532103 132532220 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100874.1 MGP_LPJ_G0039137.1 mouse_genomes_project 6 22621045 22621176 - Gm22267 snoRNA snoRNA MGP_LPJ_T0005057.1 MGP_LPJ_G0004321.1 mouse_genomes_project 6 92111464 92114716 - Gm15756 antisense antisense MGP_LPJ_T0078148.1 MGP_LPJ_G0030835.1 mouse_genomes_project 6 84741482 84770115 + MGP_LPJ_P0078148 Vax2 protein_coding protein_coding MGP_LPJ_T0100940.1 MGP_LPJ_G0039203.1 mouse_genomes_project 6 150467591 150467678 + Gm23498 snoRNA snoRNA MGP_LPJ_T0000323.1 MGP_LPJ_G0000261.1 mouse_genomes_project 6 68211394 68211696 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0076826.1 MGP_LPJ_G0030496.1 mouse_genomes_project 6 37066759 37249383 - MGP_LPJ_P0076826 Hipk2 protein_coding protein_coding MGP_LPJ_T0076827.1 MGP_LPJ_G0030496.1 mouse_genomes_project 6 37066764 37249431 - MGP_LPJ_P0076827 Hipk2 protein_coding protein_coding MGP_LPJ_T0076828.1 MGP_LPJ_G0030496.1 mouse_genomes_project 6 37067155 37249277 - MGP_LPJ_P0076828 Hipk2 protein_coding protein_coding MGP_LPJ_T0076829.1 MGP_LPJ_G0030496.1 mouse_genomes_project 6 37105658 37112220 - Hipk2 protein_coding processed_transcript MGP_LPJ_T0076830.1 MGP_LPJ_G0030496.1 mouse_genomes_project 6 37115653 37191168 - Hipk2 protein_coding retained_intron MGP_LPJ_T0076831.1 MGP_LPJ_G0030496.1 mouse_genomes_project 6 37190728 37210907 - Hipk2 protein_coding retained_intron MGP_LPJ_T0008744.1 MGP_LPJ_G0007069.1 mouse_genomes_project 6 130853513 130856526 - Gm43635 lincRNA lincRNA MGP_LPJ_T0010778.1 MGP_LPJ_G0008896.1 mouse_genomes_project 6 29156043 29156131 - Mir29a miRNA miRNA MGP_LPJ_T0080830.1 MGP_LPJ_G0031404.1 mouse_genomes_project 6 152218759 152242279 + MGP_LPJ_P0080830 Klhl42 protein_coding protein_coding MGP_LPJ_T0080831.1 MGP_LPJ_G0031404.1 mouse_genomes_project 6 152233038 152237676 + Klhl42 protein_coding processed_transcript MGP_LPJ_T0080832.1 MGP_LPJ_G0031404.1 mouse_genomes_project 6 152237596 152240103 + MGP_LPJ_P0080832 Klhl42 protein_coding nonsense_mediated_decay MGP_LPJ_T0008742.1 MGP_LPJ_G0007067.1 mouse_genomes_project 6 129840149 129883542 - Gm10415 lincRNA lincRNA MGP_LPJ_T0015286.1 MGP_LPJ_G0013377.1 mouse_genomes_project 6 47900156 47900486 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008544.1 MGP_LPJ_G0006917.1 mouse_genomes_project 6 28482823 28485943 + 1700012C14Rik lincRNA lincRNA MGP_LPJ_T0008545.1 MGP_LPJ_G0006917.1 mouse_genomes_project 6 28483680 28485995 + 1700012C14Rik lincRNA lincRNA MGP_LPJ_T0076405.1 MGP_LPJ_G0030422.1 mouse_genomes_project 6 27186352 27189051 + MGP_LPJ_P0076405 Hilpda protein_coding protein_coding MGP_LPJ_T0076406.1 MGP_LPJ_G0030422.1 mouse_genomes_project 6 27186490 27189311 + MGP_LPJ_P0076406 Hilpda protein_coding protein_coding MGP_LPJ_T0002158.1 MGP_LPJ_G0002068.1 mouse_genomes_project 6 120653140 120656374 - TEC TEC MGP_LPJ_T0002159.1 MGP_LPJ_G0002068.1 mouse_genomes_project 6 120654432 120656375 - TEC TEC MGP_LPJ_T0080260.1 MGP_LPJ_G0031263.1 mouse_genomes_project 6 133877396 133894747 - MGP_LPJ_P0080260 protein_coding protein_coding MGP_LPJ_T0077336.1 MGP_LPJ_G0030640.1 mouse_genomes_project 6 51050911 51213054 - MGP_LPJ_P0077336 Skap2 protein_coding protein_coding MGP_LPJ_T0077337.1 MGP_LPJ_G0030640.1 mouse_genomes_project 6 51052593 51066542 - Skap2 protein_coding processed_transcript MGP_LPJ_T0077338.1 MGP_LPJ_G0030640.1 mouse_genomes_project 6 51052655 51213020 - MGP_LPJ_P0077338 Skap2 protein_coding protein_coding MGP_LPJ_T0077339.1 MGP_LPJ_G0030640.1 mouse_genomes_project 6 51053545 51104938 - MGP_LPJ_P0077339 Skap2 protein_coding protein_coding MGP_LPJ_T0077340.1 MGP_LPJ_G0030640.1 mouse_genomes_project 6 51063718 51067283 - Skap2 protein_coding retained_intron MGP_LPJ_T0077341.1 MGP_LPJ_G0030640.1 mouse_genomes_project 6 51069084 51131344 - Skap2 protein_coding processed_transcript MGP_LPJ_T0077342.1 MGP_LPJ_G0030640.1 mouse_genomes_project 6 51190087 51213037 - Skap2 protein_coding retained_intron MGP_LPJ_T0077478.1 MGP_LPJ_G0030674.1 mouse_genomes_project 6 54539037 54656084 + MGP_LPJ_P0077478 Fam188b protein_coding protein_coding MGP_LPJ_T0077479.1 MGP_LPJ_G0030674.1 mouse_genomes_project 6 54539037 54613660 + MGP_LPJ_P0077479 Fam188b protein_coding protein_coding MGP_LPJ_T0077480.1 MGP_LPJ_G0030674.1 mouse_genomes_project 6 54613189 54654177 + Fam188b protein_coding processed_transcript MGP_LPJ_T0080791.1 MGP_LPJ_G0031395.1 mouse_genomes_project 6 151767723 151768158 - MGP_LPJ_P0080791 protein_coding protein_coding MGP_LPJ_T0076788.1 MGP_LPJ_G0030488.1 mouse_genomes_project 6 36627822 36639886 - MGP_LPJ_P0076788 Zc3hav1l protein_coding protein_coding MGP_LPJ_T0077584.1 MGP_LPJ_G0030719.1 mouse_genomes_project 6 57998120 57999153 - MGP_LPJ_P0077584 Vmn1r31 protein_coding protein_coding MGP_LPJ_T0077585.1 MGP_LPJ_G0030719.1 mouse_genomes_project 6 57998778 58001457 - MGP_LPJ_P0077585 Vmn1r31 protein_coding protein_coding MGP_LPJ_T0077586.1 MGP_LPJ_G0030719.1 mouse_genomes_project 6 57998778 58001411 - MGP_LPJ_P0077586 Vmn1r31 protein_coding protein_coding MGP_LPJ_T0077587.1 MGP_LPJ_G0030719.1 mouse_genomes_project 6 57998778 58001488 - MGP_LPJ_P0077587 Vmn1r31 protein_coding protein_coding MGP_LPJ_T0079698.1 MGP_LPJ_G0031127.1 mouse_genomes_project 6 125857739 125862418 - MGP_LPJ_P0079698 Gdf3 protein_coding protein_coding MGP_LPJ_T0079699.1 MGP_LPJ_G0031127.1 mouse_genomes_project 6 125860357 125862155 - Gdf3 protein_coding processed_transcript MGP_LPJ_T0079868.1 MGP_LPJ_G0031170.1 mouse_genomes_project 6 128311803 128317836 - MGP_LPJ_P0079868 Gnb3 protein_coding protein_coding MGP_LPJ_T0079869.1 MGP_LPJ_G0031170.1 mouse_genomes_project 6 128311810 128317518 - Gnb3 protein_coding retained_intron MGP_LPJ_T0079870.1 MGP_LPJ_G0031170.1 mouse_genomes_project 6 128312242 128313858 - Gnb3 protein_coding processed_transcript MGP_LPJ_T0079871.1 MGP_LPJ_G0031170.1 mouse_genomes_project 6 128316659 128317644 - Gnb3 protein_coding retained_intron MGP_LPJ_T0015542.1 MGP_LPJ_G0013633.1 mouse_genomes_project 6 126540249 126540752 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099689.1 MGP_LPJ_G0037952.1 mouse_genomes_project 6 154331869 154331973 - Gm23462 snRNA snRNA MGP_LPJ_T0002053.1 MGP_LPJ_G0001963.1 mouse_genomes_project 6 78314590 78316077 - TEC TEC MGP_LPJ_T0077245.1 MGP_LPJ_G0030621.1 mouse_genomes_project 6 47950252 47955114 + MGP_LPJ_P0077245 Svs1 protein_coding protein_coding MGP_LPJ_T0100941.1 MGP_LPJ_G0039204.1 mouse_genomes_project 6 150575112 150575227 + Gm25373 snoRNA snoRNA MGP_LPJ_T0077051.1 MGP_LPJ_G0030569.1 mouse_genomes_project 6 41408514 41409447 + MGP_LPJ_P0077051 Olfr448 protein_coding protein_coding MGP_LPJ_T0015178.1 MGP_LPJ_G0013269.1 mouse_genomes_project 6 997891 998138 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098045.1 MGP_LPJ_G0036326.1 mouse_genomes_project 6 3592375 3593554 - pseudogene pseudogene MGP_LPJ_T0078131.1 MGP_LPJ_G0030831.1 mouse_genomes_project 6 84527902 84554470 - MGP_LPJ_P0078131 Actg2 protein_coding protein_coding MGP_LPJ_T0078132.1 MGP_LPJ_G0030831.1 mouse_genomes_project 6 84527909 84544915 - MGP_LPJ_P0078132 Actg2 protein_coding protein_coding MGP_LPJ_T0078133.1 MGP_LPJ_G0030831.1 mouse_genomes_project 6 84535708 84543838 - Actg2 protein_coding processed_transcript MGP_LPJ_T0078134.1 MGP_LPJ_G0030831.1 mouse_genomes_project 6 84535708 84554428 - MGP_LPJ_P0078134 Actg2 protein_coding protein_coding MGP_LPJ_T0078135.1 MGP_LPJ_G0030831.1 mouse_genomes_project 6 84535849 84544415 - MGP_LPJ_P0078135 Actg2 protein_coding protein_coding MGP_LPJ_T0078136.1 MGP_LPJ_G0030831.1 mouse_genomes_project 6 84536624 84544735 - MGP_LPJ_P0078136 Actg2 protein_coding protein_coding MGP_LPJ_T0076703.1 MGP_LPJ_G0030469.1 mouse_genomes_project 6 33092995 33099246 - MGP_LPJ_P0076703 3110062M04Rik protein_coding protein_coding MGP_LPJ_T0076704.1 MGP_LPJ_G0030469.1 mouse_genomes_project 6 33093064 33099285 - MGP_LPJ_P0076704 3110062M04Rik protein_coding protein_coding MGP_LPJ_T0076706.1 MGP_LPJ_G0030469.1 mouse_genomes_project 6 33094919 33099234 - MGP_LPJ_P0076706 3110062M04Rik protein_coding protein_coding MGP_LPJ_T0076707.1 MGP_LPJ_G0030469.1 mouse_genomes_project 6 33095870 33098354 - MGP_LPJ_P0076707 3110062M04Rik protein_coding protein_coding MGP_LPJ_T0076708.1 MGP_LPJ_G0030469.1 mouse_genomes_project 6 33096570 33098205 - 3110062M04Rik protein_coding retained_intron MGP_LPJ_T0010797.1 MGP_LPJ_G0008915.1 mouse_genomes_project 6 82847114 82847188 - Mir7232 miRNA miRNA MGP_LPJ_T0004939.1 MGP_LPJ_G0004240.1 mouse_genomes_project 6 26068271 26117760 + 6530409C15Rik antisense antisense MGP_LPJ_T0004940.1 MGP_LPJ_G0004240.1 mouse_genomes_project 6 26068292 26071619 + 6530409C15Rik antisense antisense MGP_LPJ_T0077446.1 MGP_LPJ_G0030666.1 mouse_genomes_project 6 53900029 53946628 + MGP_LPJ_P0077446 Plekha8 protein_coding protein_coding MGP_LPJ_T0008637.1 MGP_LPJ_G0006981.1 mouse_genomes_project 6 69400519 69400757 - Rprl1 lincRNA lincRNA MGP_LPJ_T0100913.1 MGP_LPJ_G0039176.1 mouse_genomes_project 6 99429204 99429334 - Gm25852 snoRNA snoRNA MGP_LPJ_T0008626.1 MGP_LPJ_G0006972.1 mouse_genomes_project 6 55959084 56036549 - Gm8239 lincRNA lincRNA MGP_LPJ_T0079719.1 MGP_LPJ_G0031134.1 mouse_genomes_project 6 126232503 126249533 + MGP_LPJ_P0079719 Clec4a1 protein_coding protein_coding MGP_LPJ_T0076749.1 MGP_LPJ_G0030479.1 mouse_genomes_project 6 34986473 35094476 - MGP_LPJ_P0076749 Ptn protein_coding protein_coding MGP_LPJ_T0076750.1 MGP_LPJ_G0030479.1 mouse_genomes_project 6 35015687 35094435 - MGP_LPJ_P0076750 Ptn protein_coding protein_coding MGP_LPJ_T0015495.1 MGP_LPJ_G0013586.1 mouse_genomes_project 6 115073434 115075000 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015291.1 MGP_LPJ_G0013382.1 mouse_genomes_project 6 48037648 48037966 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002184.1 MGP_LPJ_G0002093.1 mouse_genomes_project 6 138440683 138443551 + TEC TEC MGP_LPJ_T0015302.1 MGP_LPJ_G0013393.1 mouse_genomes_project 6 50086095 50086333 + processed_pseudogene processed_pseudogene MGP_LPJ_T0077206.1 MGP_LPJ_G0030611.1 mouse_genomes_project 6 47654392 47696282 + MGP_LPJ_P0077206 Gm28053 protein_coding protein_coding MGP_LPJ_T0077208.1 MGP_LPJ_G0030611.1 mouse_genomes_project 6 47654439 47665519 + Gm28053 protein_coding retained_intron MGP_LPJ_T0077211.1 MGP_LPJ_G0030611.1 mouse_genomes_project 6 47675755 47696326 + MGP_LPJ_P0077211 Gm28053 protein_coding protein_coding MGP_LPJ_T0018229.1 MGP_LPJ_G0015553.1 mouse_genomes_project 6 63032525 63037012 - processed_transcript retained_intron MGP_LPJ_T0079738.1 MGP_LPJ_G0031141.1 mouse_genomes_project 6 126588139 126600987 + MGP_LPJ_P0079738 Clec4d protein_coding nonsense_mediated_decay MGP_LPJ_T0079739.1 MGP_LPJ_G0031141.1 mouse_genomes_project 6 126588145 126601329 + MGP_LPJ_P0079739 Clec4d protein_coding protein_coding MGP_LPJ_T0079740.1 MGP_LPJ_G0031141.1 mouse_genomes_project 6 126593750 126600776 + Clec4d protein_coding retained_intron MGP_LPJ_T0002101.1 MGP_LPJ_G0002011.1 mouse_genomes_project 6 90370362 90373292 + TEC TEC MGP_LPJ_T0008655.1 MGP_LPJ_G0006999.1 mouse_genomes_project 6 82939847 82948068 + lincRNA lincRNA MGP_LPJ_T0008657.1 MGP_LPJ_G0006999.1 mouse_genomes_project 6 82947104 82948646 + lincRNA lincRNA MGP_LPJ_T0011671.1 MGP_LPJ_G0009789.1 mouse_genomes_project 6 84733735 84734201 + Gm27631 misc_RNA misc_RNA MGP_LPJ_T0077553.1 MGP_LPJ_G0030703.1 mouse_genomes_project 6 56956598 56988468 - MGP_LPJ_P0077553 Ppm1k protein_coding protein_coding MGP_LPJ_T0077554.1 MGP_LPJ_G0030703.1 mouse_genomes_project 6 56963674 56965664 - MGP_LPJ_P0077554 Ppm1k protein_coding protein_coding MGP_LPJ_T0077555.1 MGP_LPJ_G0030703.1 mouse_genomes_project 6 56987476 56988511 - Ppm1k protein_coding processed_transcript MGP_LPJ_T0010790.1 MGP_LPJ_G0008908.1 mouse_genomes_project 6 51449945 51450030 - Mir196b miRNA miRNA MGP_LPJ_T0015328.1 MGP_LPJ_G0013419.1 mouse_genomes_project 6 62058424 62059960 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015437.1 MGP_LPJ_G0013528.1 mouse_genomes_project 6 89339350 89339764 - processed_pseudogene processed_pseudogene MGP_LPJ_T0078911.1 MGP_LPJ_G0030988.1 mouse_genomes_project 6 103269508 103518115 - MGP_LPJ_P0078911 Pdzrn3 protein_coding protein_coding MGP_LPJ_T0078912.1 MGP_LPJ_G0030988.1 mouse_genomes_project 6 103276872 103488486 - Pdzrn3 protein_coding processed_transcript MGP_LPJ_T0078913.1 MGP_LPJ_G0030988.1 mouse_genomes_project 6 103289644 103318991 - Pdzrn3 protein_coding retained_intron MGP_LPJ_T0078914.1 MGP_LPJ_G0030988.1 mouse_genomes_project 6 103299665 103517560 - Pdzrn3 protein_coding processed_transcript MGP_LPJ_T0010814.1 MGP_LPJ_G0008932.1 mouse_genomes_project 6 109758044 109758170 - Gm27690 miRNA miRNA MGP_LPJ_T0005128.1 MGP_LPJ_G0004375.1 mouse_genomes_project 6 139302190 139305292 + 2810454H06Rik antisense antisense MGP_LPJ_T0076244.1 MGP_LPJ_G0030383.1 mouse_genomes_project 6 16271805 16290892 + MGP_LPJ_P0076244 Ankrd7 protein_coding protein_coding MGP_LPJ_T0076245.1 MGP_LPJ_G0030383.1 mouse_genomes_project 6 16271837 16290888 + MGP_LPJ_P0076245 Ankrd7 protein_coding protein_coding MGP_LPJ_T0099658.1 MGP_LPJ_G0037921.1 mouse_genomes_project 6 79645061 79645225 + Gm23727 snRNA snRNA MGP_LPJ_T0077064.1 MGP_LPJ_G0030580.1 mouse_genomes_project 6 41862557 41885739 + MGP_LPJ_P0077064 protein_coding unknown_likely_coding MGP_LPJ_T0077065.1 MGP_LPJ_G0030580.1 mouse_genomes_project 6 41871478 41886287 + MGP_LPJ_P0077065 protein_coding protein_coding MGP_LPJ_T0077066.1 MGP_LPJ_G0030580.1 mouse_genomes_project 6 41873905 41876888 + protein_coding retained_intron MGP_LPJ_T0077067.1 MGP_LPJ_G0030580.1 mouse_genomes_project 6 41874014 41884163 + protein_coding retained_intron MGP_LPJ_T0077068.1 MGP_LPJ_G0030580.1 mouse_genomes_project 6 41876424 41886284 + protein_coding retained_intron MGP_LPJ_T0077069.1 MGP_LPJ_G0030580.1 mouse_genomes_project 6 41877957 41880534 + protein_coding retained_intron MGP_LPJ_T0077070.1 MGP_LPJ_G0030580.1 mouse_genomes_project 6 41879581 41886283 + protein_coding retained_intron MGP_LPJ_T0077071.1 MGP_LPJ_G0030580.1 mouse_genomes_project 6 41879849 41880983 + protein_coding retained_intron MGP_LPJ_T0078512.1 MGP_LPJ_G0030905.1 mouse_genomes_project 6 89683250 89882440 - MGP_LPJ_P0078512 Eefsec protein_coding protein_coding MGP_LPJ_T0078513.1 MGP_LPJ_G0030905.1 mouse_genomes_project 6 89683789 89882428 - MGP_LPJ_P0078513 Eefsec protein_coding protein_coding MGP_LPJ_T0078514.1 MGP_LPJ_G0030905.1 mouse_genomes_project 6 89684189 89882415 - MGP_LPJ_P0078514 Eefsec protein_coding protein_coding MGP_LPJ_T0078515.1 MGP_LPJ_G0030905.1 mouse_genomes_project 6 89707526 89882403 - MGP_LPJ_P0078515 Eefsec protein_coding protein_coding MGP_LPJ_T0078516.1 MGP_LPJ_G0030905.1 mouse_genomes_project 6 89722497 89875748 - MGP_LPJ_P0078516 Eefsec protein_coding protein_coding MGP_LPJ_T0078517.1 MGP_LPJ_G0030905.1 mouse_genomes_project 6 89722680 89882385 - MGP_LPJ_P0078517 Eefsec protein_coding nonsense_mediated_decay MGP_LPJ_T0010779.1 MGP_LPJ_G0008897.1 mouse_genomes_project 6 29156406 29156477 - Mir29b-1 miRNA miRNA MGP_LPJ_T0005109.1 MGP_LPJ_G0004359.1 mouse_genomes_project 6 130292991 130315902 + Gm26673 antisense antisense MGP_LPJ_T0015538.1 MGP_LPJ_G0013629.1 mouse_genomes_project 6 125809974 125810165 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015406.1 MGP_LPJ_G0013497.1 mouse_genomes_project 6 79207783 79208755 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099641.1 MGP_LPJ_G0037904.1 mouse_genomes_project 6 31236288 31236392 - Gm22321 snRNA snRNA MGP_LPJ_T0002591.1 MGP_LPJ_G0002489.1 mouse_genomes_project 6 40052162 40052208 + MGP_LPJ_P0002591 Trbj1-7 TR_J_gene TR_J_gene MGP_LPJ_T0002592.1 MGP_LPJ_G0002489.1 mouse_genomes_project 6 40052162 40052207 + Trbj1-7 TR_J_gene processed_transcript MGP_LPJ_T0080841.1 MGP_LPJ_G0031408.1 mouse_genomes_project 6 153359211 153392491 - MGP_LPJ_P0080841 Ergic2 protein_coding protein_coding MGP_LPJ_T0080842.1 MGP_LPJ_G0031408.1 mouse_genomes_project 6 153361348 153392224 - MGP_LPJ_P0080842 Ergic2 protein_coding nonsense_mediated_decay MGP_LPJ_T0080843.1 MGP_LPJ_G0031408.1 mouse_genomes_project 6 153361442 153368197 - MGP_LPJ_P0080843 Ergic2 protein_coding protein_coding MGP_LPJ_T0080844.1 MGP_LPJ_G0031408.1 mouse_genomes_project 6 153361497 153363341 - MGP_LPJ_P0080844 Ergic2 protein_coding nonsense_mediated_decay MGP_LPJ_T0080845.1 MGP_LPJ_G0031408.1 mouse_genomes_project 6 153361777 153375368 - MGP_LPJ_P0080845 Ergic2 protein_coding protein_coding MGP_LPJ_T0080846.1 MGP_LPJ_G0031408.1 mouse_genomes_project 6 153362060 153376353 - Ergic2 protein_coding retained_intron MGP_LPJ_T0080847.1 MGP_LPJ_G0031408.1 mouse_genomes_project 6 153363178 153369811 - Ergic2 protein_coding retained_intron MGP_LPJ_T0080848.1 MGP_LPJ_G0031408.1 mouse_genomes_project 6 153363830 153392491 - Ergic2 protein_coding processed_transcript MGP_LPJ_T0080849.1 MGP_LPJ_G0031408.1 mouse_genomes_project 6 153368141 153376638 - Ergic2 protein_coding retained_intron MGP_LPJ_T0080850.1 MGP_LPJ_G0031408.1 mouse_genomes_project 6 153369604 153375351 - Ergic2 protein_coding processed_transcript MGP_LPJ_T0080851.1 MGP_LPJ_G0031408.1 mouse_genomes_project 6 153369650 153392139 - MGP_LPJ_P0080851 Ergic2 protein_coding nonsense_mediated_decay MGP_LPJ_T0080852.1 MGP_LPJ_G0031408.1 mouse_genomes_project 6 153371023 153376455 - Ergic2 protein_coding processed_transcript MGP_LPJ_T0080853.1 MGP_LPJ_G0031408.1 mouse_genomes_project 6 153375305 153382905 - Ergic2 protein_coding retained_intron MGP_LPJ_T0080854.1 MGP_LPJ_G0031408.1 mouse_genomes_project 6 153379073 153392094 - Ergic2 protein_coding retained_intron MGP_LPJ_T0080855.1 MGP_LPJ_G0031408.1 mouse_genomes_project 6 153381607 153392139 - MGP_LPJ_P0080855 Ergic2 protein_coding protein_coding MGP_LPJ_T0080856.1 MGP_LPJ_G0031408.1 mouse_genomes_project 6 153382362 153392138 - Ergic2 protein_coding retained_intron MGP_LPJ_T0080857.1 MGP_LPJ_G0031408.1 mouse_genomes_project 6 153382815 153392122 - Ergic2 protein_coding processed_transcript MGP_LPJ_T0015530.1 MGP_LPJ_G0013621.1 mouse_genomes_project 6 124645817 124646224 - processed_pseudogene processed_pseudogene MGP_LPJ_T0077579.1 MGP_LPJ_G0030714.1 mouse_genomes_project 6 57482866 57483886 - MGP_LPJ_P0077579 Vmn1r26 protein_coding protein_coding MGP_LPJ_T0080907.1 MGP_LPJ_G0031415.1 mouse_genomes_project 6 154416087 154448966 - MGP_LPJ_P0080907 Amn1 protein_coding protein_coding MGP_LPJ_T0080908.1 MGP_LPJ_G0031415.1 mouse_genomes_project 6 154416207 154433628 - Amn1 protein_coding retained_intron MGP_LPJ_T0080909.1 MGP_LPJ_G0031415.1 mouse_genomes_project 6 154416517 154448918 - Amn1 protein_coding processed_transcript MGP_LPJ_T0080910.1 MGP_LPJ_G0031415.1 mouse_genomes_project 6 154416518 154448939 - MGP_LPJ_P0080910 Amn1 protein_coding protein_coding MGP_LPJ_T0080911.1 MGP_LPJ_G0031415.1 mouse_genomes_project 6 154416523 154443746 - Amn1 protein_coding processed_transcript MGP_LPJ_T0080912.1 MGP_LPJ_G0031415.1 mouse_genomes_project 6 154416539 154443743 - MGP_LPJ_P0080912 Amn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0080913.1 MGP_LPJ_G0031415.1 mouse_genomes_project 6 154427560 154448935 - Amn1 protein_coding processed_transcript MGP_LPJ_T0080914.1 MGP_LPJ_G0031415.1 mouse_genomes_project 6 154429652 154448924 - Amn1 protein_coding retained_intron MGP_LPJ_T0080915.1 MGP_LPJ_G0031415.1 mouse_genomes_project 6 154429818 154448949 - Amn1 protein_coding processed_transcript MGP_LPJ_T0080916.1 MGP_LPJ_G0031415.1 mouse_genomes_project 6 154431130 154448941 - MGP_LPJ_P0080916 Amn1 protein_coding protein_coding MGP_LPJ_T0080917.1 MGP_LPJ_G0031415.1 mouse_genomes_project 6 154433118 154448956 - Amn1 protein_coding retained_intron MGP_LPJ_T0077497.1 MGP_LPJ_G0030681.1 mouse_genomes_project 6 55441567 55723346 - MGP_LPJ_P0077497 Pde1c protein_coding protein_coding MGP_LPJ_T0077498.1 MGP_LPJ_G0030681.1 mouse_genomes_project 6 55443489 55945105 - MGP_LPJ_P0077498 Pde1c protein_coding protein_coding MGP_LPJ_T0077499.1 MGP_LPJ_G0030681.1 mouse_genomes_project 6 55444098 55722809 - Pde1c protein_coding processed_transcript MGP_LPJ_T0077500.1 MGP_LPJ_G0030681.1 mouse_genomes_project 6 55449851 55723473 - MGP_LPJ_P0077500 Pde1c protein_coding protein_coding MGP_LPJ_T0077501.1 MGP_LPJ_G0030681.1 mouse_genomes_project 6 55453868 55730830 - MGP_LPJ_P0077501 Pde1c protein_coding protein_coding MGP_LPJ_T0077502.1 MGP_LPJ_G0030681.1 mouse_genomes_project 6 55453983 55498382 - MGP_LPJ_P0077502 Pde1c protein_coding nonsense_mediated_decay MGP_LPJ_T0077503.1 MGP_LPJ_G0030681.1 mouse_genomes_project 6 55454036 55730849 - MGP_LPJ_P0077503 Pde1c protein_coding protein_coding MGP_LPJ_T0077504.1 MGP_LPJ_G0030681.1 mouse_genomes_project 6 55473101 55723265 - MGP_LPJ_P0077504 Pde1c protein_coding protein_coding MGP_LPJ_T0077505.1 MGP_LPJ_G0030681.1 mouse_genomes_project 6 55476685 55730878 - MGP_LPJ_P0077505 Pde1c protein_coding protein_coding MGP_LPJ_T0077506.1 MGP_LPJ_G0030681.1 mouse_genomes_project 6 55478399 55724118 - MGP_LPJ_P0077506 Pde1c protein_coding protein_coding MGP_LPJ_T0077507.1 MGP_LPJ_G0030681.1 mouse_genomes_project 6 55478853 55723320 - MGP_LPJ_P0077507 Pde1c protein_coding protein_coding MGP_LPJ_T0077508.1 MGP_LPJ_G0030681.1 mouse_genomes_project 6 55552522 55723328 - Pde1c protein_coding retained_intron MGP_LPJ_T0077509.1 MGP_LPJ_G0030681.1 mouse_genomes_project 6 55702794 55723267 - Pde1c protein_coding retained_intron MGP_LPJ_T0077510.1 MGP_LPJ_G0030681.1 mouse_genomes_project 6 55706011 55730851 - Pde1c protein_coding retained_intron MGP_LPJ_T0077468.1 MGP_LPJ_G0030672.1 mouse_genomes_project 6 54422931 54465776 - MGP_LPJ_P0077468 Crhr2 protein_coding protein_coding MGP_LPJ_T0077469.1 MGP_LPJ_G0030672.1 mouse_genomes_project 6 54424067 54450869 - MGP_LPJ_P0077469 Crhr2 protein_coding nonsense_mediated_decay MGP_LPJ_T0077470.1 MGP_LPJ_G0030672.1 mouse_genomes_project 6 54424094 54450797 - MGP_LPJ_P0077470 Crhr2 protein_coding protein_coding MGP_LPJ_T0077471.1 MGP_LPJ_G0030672.1 mouse_genomes_project 6 54424159 54450655 - MGP_LPJ_P0077471 Crhr2 protein_coding unknown_likely_coding MGP_LPJ_T0077472.1 MGP_LPJ_G0030672.1 mouse_genomes_project 6 54424901 54465603 - MGP_LPJ_P0077472 Crhr2 protein_coding protein_coding MGP_LPJ_T0077473.1 MGP_LPJ_G0030672.1 mouse_genomes_project 6 54425839 54433450 - Crhr2 protein_coding retained_intron MGP_LPJ_T0077474.1 MGP_LPJ_G0030672.1 mouse_genomes_project 6 54431503 54465778 - Crhr2 protein_coding retained_intron MGP_LPJ_T0077475.1 MGP_LPJ_G0030672.1 mouse_genomes_project 6 54437626 54450655 - Crhr2 protein_coding retained_intron MGP_LPJ_T0015423.1 MGP_LPJ_G0013514.1 mouse_genomes_project 6 86167659 86168053 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015284.1 MGP_LPJ_G0013375.1 mouse_genomes_project 6 47597799 47598257 - processed_pseudogene processed_pseudogene MGP_LPJ_T0079749.1 MGP_LPJ_G0031144.1 mouse_genomes_project 6 126865428 126925837 - MGP_LPJ_P0079749 protein_coding protein_coding MGP_LPJ_T0101585.1 MGP_LPJ_G0039672.1 mouse_genomes_project 6 132859911 132866335 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101586.1 MGP_LPJ_G0039672.1 mouse_genomes_project 6 132864389 132866327 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0080316.1 MGP_LPJ_G0031303.1 mouse_genomes_project 6 137314542 137315543 - MGP_LPJ_P0080316 Tas2r140 protein_coding protein_coding MGP_LPJ_T0077376.1 MGP_LPJ_G0030654.1 mouse_genomes_project 6 51534866 51539747 + MGP_LPJ_P0077376 Evx1 protein_coding protein_coding MGP_LPJ_T0077377.1 MGP_LPJ_G0030654.1 mouse_genomes_project 6 51534920 51538013 + MGP_LPJ_P0077377 Evx1 protein_coding protein_coding MGP_LPJ_T0080186.1 MGP_LPJ_G0031237.1 mouse_genomes_project 6 132697447 132740483 - MGP_LPJ_P0080186 BC035044 protein_coding protein_coding MGP_LPJ_T0001992.1 MGP_LPJ_G0001902.1 mouse_genomes_project 6 43945962 43948760 + TEC TEC MGP_LPJ_T0015556.1 MGP_LPJ_G0013647.1 mouse_genomes_project 6 130763828 130764348 + processed_pseudogene processed_pseudogene MGP_LPJ_T0077349.1 MGP_LPJ_G0030645.1 mouse_genomes_project 6 51397527 51400880 + MGP_LPJ_P0077349 5730596B20Rik protein_coding protein_coding MGP_LPJ_T0100908.1 MGP_LPJ_G0039171.1 mouse_genomes_project 6 92380551 92380647 + Gm25185 snoRNA snoRNA MGP_LPJ_T0008656.1 MGP_LPJ_G0007000.1 mouse_genomes_project 6 82941221 82942212 - Gm44202 lincRNA lincRNA MGP_LPJ_T0080276.1 MGP_LPJ_G0031272.1 mouse_genomes_project 6 135541608 135556526 - MGP_LPJ_P0080276 Styk1 protein_coding protein_coding MGP_LPJ_T0080277.1 MGP_LPJ_G0031272.1 mouse_genomes_project 6 135542596 135559065 - MGP_LPJ_P0080277 Styk1 protein_coding protein_coding MGP_LPJ_T0080278.1 MGP_LPJ_G0031272.1 mouse_genomes_project 6 135553875 135596632 - Styk1 protein_coding processed_transcript MGP_LPJ_T0080279.1 MGP_LPJ_G0031272.1 mouse_genomes_project 6 135582382 135596629 - Styk1 protein_coding processed_transcript MGP_LPJ_T0080280.1 MGP_LPJ_G0031272.1 mouse_genomes_project 6 135595005 135596632 - Styk1 protein_coding retained_intron MGP_LPJ_T0002218.1 MGP_LPJ_G0002127.1 mouse_genomes_project 6 154843649 154846902 + TEC TEC MGP_LPJ_T0077665.1 MGP_LPJ_G0030733.1 mouse_genomes_project 6 65372517 65482862 + MGP_LPJ_P0077665 Tnip3 protein_coding protein_coding MGP_LPJ_T0077666.1 MGP_LPJ_G0030733.1 mouse_genomes_project 6 65440636 65450395 + Tnip3 protein_coding retained_intron MGP_LPJ_T0077667.1 MGP_LPJ_G0030733.1 mouse_genomes_project 6 65440648 65441882 + Tnip3 protein_coding processed_transcript MGP_LPJ_T0077668.1 MGP_LPJ_G0030733.1 mouse_genomes_project 6 65440679 65443921 + Tnip3 protein_coding retained_intron MGP_LPJ_T0077669.1 MGP_LPJ_G0030733.1 mouse_genomes_project 6 65440707 65445334 + Tnip3 protein_coding retained_intron MGP_LPJ_T0077670.1 MGP_LPJ_G0030733.1 mouse_genomes_project 6 65447794 65450418 + Tnip3 protein_coding retained_intron MGP_LPJ_T0079151.1 MGP_LPJ_G0031032.1 mouse_genomes_project 6 116188347 116195921 + MGP_LPJ_P0079151 Vhl protein_coding protein_coding MGP_LPJ_T0079152.1 MGP_LPJ_G0031032.1 mouse_genomes_project 6 116189109 116194049 + Vhl protein_coding processed_transcript MGP_LPJ_T0079153.1 MGP_LPJ_G0031032.1 mouse_genomes_project 6 116189317 116193845 + Vhl protein_coding processed_transcript MGP_LPJ_T0079154.1 MGP_LPJ_G0031032.1 mouse_genomes_project 6 116193794 116195915 + MGP_LPJ_P0079154 Vhl protein_coding nonsense_mediated_decay MGP_LPJ_T0002707.1 MGP_LPJ_G0002587.1 mouse_genomes_project 6 39605982 39606500 + MGP_LPJ_P0002707 Trbv12-1 TR_V_gene TR_V_gene MGP_LPJ_T0079368.1 MGP_LPJ_G0031069.1 mouse_genomes_project 6 119262003 119265132 + MGP_LPJ_P0079368 Olfr214 protein_coding protein_coding MGP_LPJ_T0079369.1 MGP_LPJ_G0031069.1 mouse_genomes_project 6 119264124 119265132 + MGP_LPJ_P0079369 Olfr214 protein_coding protein_coding MGP_LPJ_T0099654.1 MGP_LPJ_G0037917.1 mouse_genomes_project 6 65850102 65850202 - Gm23625 snRNA snRNA MGP_LPJ_T0077971.1 MGP_LPJ_G0030800.1 mouse_genomes_project 6 82908796 82919014 - MGP_LPJ_P0077971 Mrpl19 protein_coding protein_coding MGP_LPJ_T0077972.1 MGP_LPJ_G0030800.1 mouse_genomes_project 6 82915440 82918663 - Mrpl19 protein_coding processed_transcript MGP_LPJ_T0015384.1 MGP_LPJ_G0013475.1 mouse_genomes_project 6 70691022 70692919 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008762.1 MGP_LPJ_G0007082.1 mouse_genomes_project 6 139336315 139337441 - Gm44238 lincRNA lincRNA MGP_LPJ_T0001984.1 MGP_LPJ_G0001894.1 mouse_genomes_project 6 39380540 39381883 - TEC TEC MGP_LPJ_T0015223.1 MGP_LPJ_G0013314.1 mouse_genomes_project 6 18489746 18490299 - processed_pseudogene processed_pseudogene MGP_LPJ_T0076161.1 MGP_LPJ_G0030371.1 mouse_genomes_project 6 14137322 14206119 - MGP_LPJ_P0076161 Tfec protein_coding nonsense_mediated_decay MGP_LPJ_T0076162.1 MGP_LPJ_G0030371.1 mouse_genomes_project 6 14137887 14173661 - MGP_LPJ_P0076162 Tfec protein_coding protein_coding MGP_LPJ_T0076163.1 MGP_LPJ_G0030371.1 mouse_genomes_project 6 14138627 14139199 - MGP_LPJ_P0076163 Tfec protein_coding protein_coding MGP_LPJ_T0076164.1 MGP_LPJ_G0030371.1 mouse_genomes_project 6 14146219 14206161 - Tfec protein_coding retained_intron MGP_LPJ_T0076165.1 MGP_LPJ_G0030371.1 mouse_genomes_project 6 14149000 14150800 - Tfec protein_coding retained_intron MGP_LPJ_T0076541.1 MGP_LPJ_G0030442.1 mouse_genomes_project 6 28505578 28536131 - MGP_LPJ_P0076541 Tmem209 protein_coding nonsense_mediated_decay MGP_LPJ_T0076542.1 MGP_LPJ_G0030442.1 mouse_genomes_project 6 28507322 28536142 - MGP_LPJ_P0076542 Tmem209 protein_coding protein_coding MGP_LPJ_T0076543.1 MGP_LPJ_G0030442.1 mouse_genomes_project 6 28507547 28536143 - MGP_LPJ_P0076543 Tmem209 protein_coding nonsense_mediated_decay MGP_LPJ_T0076544.1 MGP_LPJ_G0030442.1 mouse_genomes_project 6 28507753 28536210 - MGP_LPJ_P0076544 Tmem209 protein_coding protein_coding MGP_LPJ_T0076545.1 MGP_LPJ_G0030442.1 mouse_genomes_project 6 28508940 28536145 - MGP_LPJ_P0076545 Tmem209 protein_coding protein_coding MGP_LPJ_T0076546.1 MGP_LPJ_G0030442.1 mouse_genomes_project 6 28509326 28536142 - MGP_LPJ_P0076546 Tmem209 protein_coding protein_coding MGP_LPJ_T0076547.1 MGP_LPJ_G0030442.1 mouse_genomes_project 6 28516877 28518701 - Tmem209 protein_coding retained_intron MGP_LPJ_T0076548.1 MGP_LPJ_G0030442.1 mouse_genomes_project 6 28528524 28536176 - MGP_LPJ_P0076548 Tmem209 protein_coding protein_coding MGP_LPJ_T0076549.1 MGP_LPJ_G0030442.1 mouse_genomes_project 6 28531166 28536149 - Tmem209 protein_coding retained_intron MGP_LPJ_T0076550.1 MGP_LPJ_G0030442.1 mouse_genomes_project 6 28532178 28536151 - MGP_LPJ_P0076550 Tmem209 protein_coding protein_coding MGP_LPJ_T0008563.1 MGP_LPJ_G0006929.1 mouse_genomes_project 6 29785579 29789491 - lincRNA lincRNA MGP_LPJ_T0080212.1 MGP_LPJ_G0031246.1 mouse_genomes_project 6 133296489 133313557 + MGP_LPJ_P0080212 Clec9a protein_coding protein_coding MGP_LPJ_T0080213.1 MGP_LPJ_G0031246.1 mouse_genomes_project 6 133296490 133311363 + MGP_LPJ_P0080213 Clec9a protein_coding protein_coding MGP_LPJ_T0080214.1 MGP_LPJ_G0031246.1 mouse_genomes_project 6 133296582 133311152 + MGP_LPJ_P0080214 Clec9a protein_coding protein_coding MGP_LPJ_T0080215.1 MGP_LPJ_G0031246.1 mouse_genomes_project 6 133296582 133311152 + MGP_LPJ_P0080215 Clec9a protein_coding protein_coding MGP_LPJ_T0015524.1 MGP_LPJ_G0013615.1 mouse_genomes_project 6 123819789 123825195 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008713.1 MGP_LPJ_G0007040.1 mouse_genomes_project 6 107771703 107775543 - lincRNA lincRNA MGP_LPJ_T0076590.1 MGP_LPJ_G0030450.1 mouse_genomes_project 6 28785940 28983931 - MGP_LPJ_P0076590 Copg2 protein_coding protein_coding MGP_LPJ_T0076591.1 MGP_LPJ_G0030450.1 mouse_genomes_project 6 28786798 28983986 - MGP_LPJ_P0076591 Copg2 protein_coding protein_coding MGP_LPJ_T0076592.1 MGP_LPJ_G0030450.1 mouse_genomes_project 6 28904381 28983902 - Copg2 protein_coding processed_transcript MGP_LPJ_T0076593.1 MGP_LPJ_G0030450.1 mouse_genomes_project 6 28904871 28983956 - Copg2 protein_coding processed_transcript MGP_LPJ_T0076594.1 MGP_LPJ_G0030450.1 mouse_genomes_project 6 28944845 28983922 - Copg2 protein_coding processed_transcript MGP_LPJ_T0076595.1 MGP_LPJ_G0030450.1 mouse_genomes_project 6 28945221 28983618 - Copg2 protein_coding processed_transcript MGP_LPJ_T0076596.1 MGP_LPJ_G0030450.1 mouse_genomes_project 6 28982088 28983629 - Copg2 protein_coding processed_transcript MGP_LPJ_T0076597.1 MGP_LPJ_G0030450.1 mouse_genomes_project 6 28983306 28983940 - Copg2 protein_coding processed_transcript MGP_LPJ_T0077681.1 MGP_LPJ_G0030737.1 mouse_genomes_project 6 66390267 66402095 + MGP_LPJ_P0077681 Mad2l1 protein_coding protein_coding MGP_LPJ_T0077682.1 MGP_LPJ_G0030737.1 mouse_genomes_project 6 66390555 66390951 + Mad2l1 protein_coding processed_transcript MGP_LPJ_T0018249.1 MGP_LPJ_G0015560.1 mouse_genomes_project 6 110992610 110995125 + Gm17055 processed_transcript lincRNA MGP_LPJ_T0018250.1 MGP_LPJ_G0015560.1 mouse_genomes_project 6 110992738 110995245 + Gm17055 processed_transcript retained_intron MGP_LPJ_T0015216.1 MGP_LPJ_G0013307.1 mouse_genomes_project 6 15682469 15683430 + processed_pseudogene processed_pseudogene MGP_LPJ_T0080597.1 MGP_LPJ_G0031362.1 mouse_genomes_project 6 146900199 146939388 - MGP_LPJ_P0080597 Gm6614 protein_coding protein_coding MGP_LPJ_T0080598.1 MGP_LPJ_G0031362.1 mouse_genomes_project 6 146900199 146939388 - MGP_LPJ_P0080598 Gm6614 protein_coding protein_coding MGP_LPJ_T0080599.1 MGP_LPJ_G0031362.1 mouse_genomes_project 6 146900550 146936725 - MGP_LPJ_P0080599 Gm6614 protein_coding protein_coding MGP_LPJ_T0076633.1 MGP_LPJ_G0030458.1 mouse_genomes_project 6 31392120 32153551 + MGP_LPJ_P0076633 Exoc4 protein_coding protein_coding MGP_LPJ_T0076634.1 MGP_LPJ_G0030458.1 mouse_genomes_project 6 31392163 31510426 + Exoc4 protein_coding retained_intron MGP_LPJ_T0076635.1 MGP_LPJ_G0030458.1 mouse_genomes_project 6 31392163 31989180 + Exoc4 protein_coding processed_transcript MGP_LPJ_T0076636.1 MGP_LPJ_G0030458.1 mouse_genomes_project 6 31392163 31643112 + MGP_LPJ_P0076636 Exoc4 protein_coding protein_coding MGP_LPJ_T0076637.1 MGP_LPJ_G0030458.1 mouse_genomes_project 6 31392167 31743883 + MGP_LPJ_P0076637 Exoc4 protein_coding protein_coding MGP_LPJ_T0076638.1 MGP_LPJ_G0030458.1 mouse_genomes_project 6 31392171 31468777 + Exoc4 protein_coding processed_transcript MGP_LPJ_T0076639.1 MGP_LPJ_G0030458.1 mouse_genomes_project 6 31481949 31666617 + Exoc4 protein_coding processed_transcript MGP_LPJ_T0076640.1 MGP_LPJ_G0030458.1 mouse_genomes_project 6 31483011 31500182 + Exoc4 protein_coding retained_intron MGP_LPJ_T0076641.1 MGP_LPJ_G0030458.1 mouse_genomes_project 6 31866434 32041103 + Exoc4 protein_coding processed_transcript MGP_LPJ_T0076642.1 MGP_LPJ_G0030458.1 mouse_genomes_project 6 32041042 32053096 + Exoc4 protein_coding processed_transcript MGP_LPJ_T0004989.1 MGP_LPJ_G0004278.1 mouse_genomes_project 6 53995292 53996280 - Gm28402 antisense antisense MGP_LPJ_T0015426.1 MGP_LPJ_G0013517.1 mouse_genomes_project 6 86202085 86202227 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005002.1 MGP_LPJ_G0004290.1 mouse_genomes_project 6 73102945 73112108 + Gm15401 antisense antisense MGP_LPJ_T0005003.1 MGP_LPJ_G0004290.1 mouse_genomes_project 6 73103494 73112991 + Gm15401 antisense antisense MGP_LPJ_T0005004.1 MGP_LPJ_G0004290.1 mouse_genomes_project 6 73111877 73113342 + Gm15401 antisense antisense MGP_LPJ_T0008546.1 MGP_LPJ_G0006918.1 mouse_genomes_project 6 28984090 29026917 + 4930412F09Rik lincRNA lincRNA MGP_LPJ_T0098290.1 MGP_LPJ_G0036571.1 mouse_genomes_project 6 96587168 96587311 - Gm24601 rRNA rRNA MGP_LPJ_T0000048.1 MGP_LPJ_G0000040.1 mouse_genomes_project 6 71076722 71076761 + MGP_LPJ_P0000048 Igkj2 IG_J_gene IG_J_gene MGP_LPJ_T0000049.1 MGP_LPJ_G0000040.1 mouse_genomes_project 6 71076722 71076765 + Igkj2 IG_J_gene processed_transcript MGP_LPJ_T0077481.1 MGP_LPJ_G0030675.1 mouse_genomes_project 6 54672267 54684389 + MGP_LPJ_P0077481 Aqp1 protein_coding protein_coding MGP_LPJ_T0078432.1 MGP_LPJ_G0030885.1 mouse_genomes_project 6 88709056 88714350 - MGP_LPJ_P0078432 Gkn1 protein_coding protein_coding MGP_LPJ_T0100930.1 MGP_LPJ_G0039193.1 mouse_genomes_project 6 127620006 127620116 + Gm23554 snoRNA snoRNA MGP_LPJ_T0077118.1 MGP_LPJ_G0030589.1 mouse_genomes_project 6 46679397 46709845 + MGP_LPJ_P0077118 Zfp282 protein_coding protein_coding MGP_LPJ_T0077119.1 MGP_LPJ_G0030589.1 mouse_genomes_project 6 46679849 46695004 + Zfp282 protein_coding retained_intron MGP_LPJ_T0077428.1 MGP_LPJ_G0030663.1 mouse_genomes_project 6 53729414 53804857 + MGP_LPJ_P0077428 Wipf3 protein_coding protein_coding MGP_LPJ_T0077429.1 MGP_LPJ_G0030663.1 mouse_genomes_project 6 53729414 53804857 + MGP_LPJ_P0077429 Wipf3 protein_coding protein_coding MGP_LPJ_T0077430.1 MGP_LPJ_G0030663.1 mouse_genomes_project 6 53753045 53804860 + MGP_LPJ_P0077430 Wipf3 protein_coding protein_coding MGP_LPJ_T0077431.1 MGP_LPJ_G0030663.1 mouse_genomes_project 6 53753045 53804860 + MGP_LPJ_P0077431 Wipf3 protein_coding protein_coding MGP_LPJ_T0077432.1 MGP_LPJ_G0030663.1 mouse_genomes_project 6 53772254 53785640 + Wipf3 protein_coding processed_transcript MGP_LPJ_T0077433.1 MGP_LPJ_G0030663.1 mouse_genomes_project 6 53788999 53792635 + Wipf3 protein_coding retained_intron MGP_LPJ_T0002726.1 MGP_LPJ_G0002602.1 mouse_genomes_project 6 39767270 39767885 + MGP_LPJ_P0002726 Trbv30 TR_V_gene TR_V_gene MGP_LPJ_T0002727.1 MGP_LPJ_G0002602.1 mouse_genomes_project 6 39767270 39767885 + MGP_LPJ_P0002727 Trbv30 TR_V_gene TR_V_gene MGP_LPJ_T0000210.1 MGP_LPJ_G0000159.1 mouse_genomes_project 6 69929228 69929823 - MGP_LPJ_P0000210 IG_V_gene IG_V_gene MGP_LPJ_T0015224.1 MGP_LPJ_G0013315.1 mouse_genomes_project 6 19043809 19044029 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010796.1 MGP_LPJ_G0008914.1 mouse_genomes_project 6 75077740 75077850 - Gm22254 miRNA miRNA MGP_LPJ_T0015455.1 MGP_LPJ_G0013546.1 mouse_genomes_project 6 96608397 96608833 - processed_pseudogene processed_pseudogene MGP_LPJ_T0078613.1 MGP_LPJ_G0030918.1 mouse_genomes_project 6 91204307 91205240 + MGP_LPJ_P0078613 Vmn1r40 protein_coding protein_coding MGP_LPJ_T0102273.1 MGP_LPJ_G0040310.1 mouse_genomes_project 6 137015390 137015755 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0011673.1 MGP_LPJ_G0009791.1 mouse_genomes_project 6 86171268 86171523 + Gm26353 misc_RNA misc_RNA MGP_LPJ_T0079132.1 MGP_LPJ_G0031027.1 mouse_genomes_project 6 116050419 116058718 - MGP_LPJ_P0079132 Prrt3 protein_coding protein_coding MGP_LPJ_T0079133.1 MGP_LPJ_G0031027.1 mouse_genomes_project 6 116050705 116058766 - MGP_LPJ_P0079133 Prrt3 protein_coding protein_coding MGP_LPJ_T0079134.1 MGP_LPJ_G0031027.1 mouse_genomes_project 6 116050875 116058653 - MGP_LPJ_P0079134 Prrt3 protein_coding protein_coding MGP_LPJ_T0079135.1 MGP_LPJ_G0031027.1 mouse_genomes_project 6 116053048 116058722 - MGP_LPJ_P0079135 Prrt3 protein_coding protein_coding MGP_LPJ_T0079136.1 MGP_LPJ_G0031027.1 mouse_genomes_project 6 116053080 116058728 - MGP_LPJ_P0079136 Prrt3 protein_coding protein_coding MGP_LPJ_T0001939.1 MGP_LPJ_G0001849.1 mouse_genomes_project 6 1531402 1533271 + TEC TEC MGP_LPJ_T0002069.1 MGP_LPJ_G0001979.1 mouse_genomes_project 6 84431954 84435501 - TEC TEC MGP_LPJ_T0002173.1 MGP_LPJ_G0002082.1 mouse_genomes_project 6 131439208 131441976 - TEC TEC MGP_LPJ_T0001949.1 MGP_LPJ_G0001859.1 mouse_genomes_project 6 9936578 9937524 + TEC TEC MGP_LPJ_T0015345.1 MGP_LPJ_G0013436.1 mouse_genomes_project 6 65262750 65264353 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010780.1 MGP_LPJ_G0008898.1 mouse_genomes_project 6 33751232 33751328 - Gm23053 miRNA miRNA MGP_LPJ_T0008631.1 MGP_LPJ_G0006976.1 mouse_genomes_project 6 60274489 60278901 + Gm35386 lincRNA lincRNA MGP_LPJ_T0015309.1 MGP_LPJ_G0013400.1 mouse_genomes_project 6 52428033 52429219 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102237.1 MGP_LPJ_G0040274.1 mouse_genomes_project 6 58019967 58020867 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0015251.1 MGP_LPJ_G0013342.1 mouse_genomes_project 6 36124714 36125117 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004988.1 MGP_LPJ_G0004277.1 mouse_genomes_project 6 53763925 53773423 - Gm44026 antisense antisense MGP_LPJ_T0076646.1 MGP_LPJ_G0030460.1 mouse_genomes_project 6 32344039 32367734 - MGP_LPJ_P0076646 Slc35b4 protein_coding protein_coding MGP_LPJ_T0076647.1 MGP_LPJ_G0030460.1 mouse_genomes_project 6 32347378 32354132 - Slc35b4 protein_coding retained_intron MGP_LPJ_T0076648.1 MGP_LPJ_G0030460.1 mouse_genomes_project 6 32348740 32367593 - Slc35b4 protein_coding retained_intron MGP_LPJ_T0076649.1 MGP_LPJ_G0030460.1 mouse_genomes_project 6 32351173 32367705 - MGP_LPJ_P0076649 Slc35b4 protein_coding nonsense_mediated_decay MGP_LPJ_T0008523.1 MGP_LPJ_G0006902.1 mouse_genomes_project 6 9613661 9659222 + lincRNA lincRNA MGP_LPJ_T0078161.1 MGP_LPJ_G0030839.1 mouse_genomes_project 6 84834786 84842360 + MGP_LPJ_P0078161 Nagk protein_coding protein_coding MGP_LPJ_T0078162.1 MGP_LPJ_G0030839.1 mouse_genomes_project 6 84834832 84842358 + MGP_LPJ_P0078162 Nagk protein_coding protein_coding MGP_LPJ_T0078163.1 MGP_LPJ_G0030839.1 mouse_genomes_project 6 84834965 84838423 + Nagk protein_coding retained_intron MGP_LPJ_T0078164.1 MGP_LPJ_G0030839.1 mouse_genomes_project 6 84835012 84842138 + Nagk protein_coding processed_transcript MGP_LPJ_T0078165.1 MGP_LPJ_G0030839.1 mouse_genomes_project 6 84835039 84843224 + MGP_LPJ_P0078165 Nagk protein_coding protein_coding MGP_LPJ_T0078166.1 MGP_LPJ_G0030839.1 mouse_genomes_project 6 84836046 84836798 + Nagk protein_coding retained_intron MGP_LPJ_T0078167.1 MGP_LPJ_G0030839.1 mouse_genomes_project 6 84836833 84840072 + Nagk protein_coding retained_intron MGP_LPJ_T0078168.1 MGP_LPJ_G0030839.1 mouse_genomes_project 6 84837751 84839167 + Nagk protein_coding retained_intron MGP_LPJ_T0078169.1 MGP_LPJ_G0030839.1 mouse_genomes_project 6 84837784 84840936 + Nagk protein_coding processed_transcript MGP_LPJ_T0078170.1 MGP_LPJ_G0030839.1 mouse_genomes_project 6 84841951 84843822 + Nagk protein_coding retained_intron MGP_LPJ_T0015415.1 MGP_LPJ_G0013506.1 mouse_genomes_project 6 83981591 83982348 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004981.1 MGP_LPJ_G0004273.1 mouse_genomes_project 6 51403133 51409929 + Gm29430 antisense antisense MGP_LPJ_T0004982.1 MGP_LPJ_G0004273.1 mouse_genomes_project 6 51403757 51409856 + Gm29430 antisense antisense MGP_LPJ_T0015544.1 MGP_LPJ_G0013635.1 mouse_genomes_project 6 127343223 127344073 + processed_pseudogene processed_pseudogene MGP_LPJ_T0079278.1 MGP_LPJ_G0031054.1 mouse_genomes_project 6 118464575 118469041 - MGP_LPJ_P0079278 Rpl32 protein_coding protein_coding MGP_LPJ_T0079279.1 MGP_LPJ_G0031054.1 mouse_genomes_project 6 118464582 118468642 - MGP_LPJ_P0079279 Rpl32 protein_coding protein_coding MGP_LPJ_T0101588.1 MGP_LPJ_G0039674.1 mouse_genomes_project 6 133778782 134212028 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101589.1 MGP_LPJ_G0039674.1 mouse_genomes_project 6 133877717 134210135 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0008554.1 MGP_LPJ_G0006923.1 mouse_genomes_project 6 29460448 29476066 + Gm14532 lincRNA lincRNA MGP_LPJ_T0079485.1 MGP_LPJ_G0031091.1 mouse_genomes_project 6 122156594 122228342 - MGP_LPJ_P0079485 Adipor2 protein_coding protein_coding MGP_LPJ_T0079486.1 MGP_LPJ_G0031091.1 mouse_genomes_project 6 122157211 122196196 - MGP_LPJ_P0079486 Adipor2 protein_coding protein_coding MGP_LPJ_T0079487.1 MGP_LPJ_G0031091.1 mouse_genomes_project 6 122158907 122198538 - MGP_LPJ_P0079487 Adipor2 protein_coding nonsense_mediated_decay MGP_LPJ_T0079488.1 MGP_LPJ_G0031091.1 mouse_genomes_project 6 122161129 122228328 - Adipor2 protein_coding retained_intron MGP_LPJ_T0079489.1 MGP_LPJ_G0031091.1 mouse_genomes_project 6 122175043 122228113 - MGP_LPJ_P0079489 Adipor2 protein_coding protein_coding MGP_LPJ_T0078671.1 MGP_LPJ_G0030941.1 mouse_genomes_project 6 92544479 92654619 - MGP_LPJ_P0078671 Nup210 protein_coding protein_coding MGP_LPJ_T0078672.1 MGP_LPJ_G0030941.1 mouse_genomes_project 6 92544481 92654609 - MGP_LPJ_P0078672 Nup210 protein_coding protein_coding MGP_LPJ_T0078673.1 MGP_LPJ_G0030941.1 mouse_genomes_project 6 92544481 92592413 - MGP_LPJ_P0078673 Nup210 protein_coding protein_coding MGP_LPJ_T0078674.1 MGP_LPJ_G0030941.1 mouse_genomes_project 6 92544728 92549954 - Nup210 protein_coding processed_transcript MGP_LPJ_T0078675.1 MGP_LPJ_G0030941.1 mouse_genomes_project 6 92551269 92559589 - Nup210 protein_coding retained_intron MGP_LPJ_T0078676.1 MGP_LPJ_G0030941.1 mouse_genomes_project 6 92551448 92558132 - Nup210 protein_coding processed_transcript MGP_LPJ_T0078677.1 MGP_LPJ_G0030941.1 mouse_genomes_project 6 92560659 92564338 - Nup210 protein_coding retained_intron MGP_LPJ_T0078678.1 MGP_LPJ_G0030941.1 mouse_genomes_project 6 92589619 92590655 - Nup210 protein_coding processed_transcript MGP_LPJ_T0078679.1 MGP_LPJ_G0030941.1 mouse_genomes_project 6 92599366 92604091 - Nup210 protein_coding processed_transcript MGP_LPJ_T0078680.1 MGP_LPJ_G0030941.1 mouse_genomes_project 6 92622167 92635186 - Nup210 protein_coding retained_intron MGP_LPJ_T0078681.1 MGP_LPJ_G0030941.1 mouse_genomes_project 6 92652145 92654586 - Nup210 protein_coding retained_intron MGP_LPJ_T0000187.1 MGP_LPJ_G0000138.1 mouse_genomes_project 6 68832815 68833371 - MGP_LPJ_P0000187 Igkv4-92 IG_V_gene IG_V_gene MGP_LPJ_T0078532.1 MGP_LPJ_G0030908.1 mouse_genomes_project 6 89983412 90058865 - MGP_LPJ_P0078532 Kbtbd12 protein_coding protein_coding MGP_LPJ_T0078533.1 MGP_LPJ_G0030908.1 mouse_genomes_project 6 89983418 90049938 - MGP_LPJ_P0078533 Kbtbd12 protein_coding protein_coding MGP_LPJ_T0078534.1 MGP_LPJ_G0030908.1 mouse_genomes_project 6 90018194 90022318 - Kbtbd12 protein_coding retained_intron MGP_LPJ_T0078535.1 MGP_LPJ_G0030908.1 mouse_genomes_project 6 90045189 90058871 - Kbtbd12 protein_coding retained_intron MGP_LPJ_T0078536.1 MGP_LPJ_G0030908.1 mouse_genomes_project 6 90045468 90049959 - Kbtbd12 protein_coding processed_transcript MGP_LPJ_T0078537.1 MGP_LPJ_G0030908.1 mouse_genomes_project 6 90048872 90058868 - Kbtbd12 protein_coding retained_intron MGP_LPJ_T0078538.1 MGP_LPJ_G0030908.1 mouse_genomes_project 6 90050053 90070975 - MGP_LPJ_P0078538 Kbtbd12 protein_coding protein_coding MGP_LPJ_T0100919.1 MGP_LPJ_G0039182.1 mouse_genomes_project 6 119047107 119047237 - Gm23527 snoRNA snoRNA MGP_LPJ_T0078436.1 MGP_LPJ_G0030889.1 mouse_genomes_project 6 88822240 88862091 - Arhgap25 protein_coding retained_intron MGP_LPJ_T0078437.1 MGP_LPJ_G0030889.1 mouse_genomes_project 6 88822240 88905012 - MGP_LPJ_P0078437 Arhgap25 protein_coding protein_coding MGP_LPJ_T0078438.1 MGP_LPJ_G0030889.1 mouse_genomes_project 6 88823635 88861872 - MGP_LPJ_P0078438 Arhgap25 protein_coding protein_coding MGP_LPJ_T0078439.1 MGP_LPJ_G0030889.1 mouse_genomes_project 6 88823830 88827365 - Arhgap25 protein_coding retained_intron MGP_LPJ_T0099634.1 MGP_LPJ_G0037897.1 mouse_genomes_project 6 11526621 11526727 - Gm23013 snRNA snRNA MGP_LPJ_T0005088.1 MGP_LPJ_G0004339.1 mouse_genomes_project 6 116174728 116176842 - Gm44199 antisense antisense MGP_LPJ_T0080220.1 MGP_LPJ_G0031248.1 mouse_genomes_project 6 133368940 133395770 - MGP_LPJ_P0080220 Olr1 protein_coding protein_coding MGP_LPJ_T0080221.1 MGP_LPJ_G0031248.1 mouse_genomes_project 6 133371493 133395712 - MGP_LPJ_P0080221 Olr1 protein_coding protein_coding MGP_LPJ_T0080222.1 MGP_LPJ_G0031248.1 mouse_genomes_project 6 133371493 133395712 - MGP_LPJ_P0080222 Olr1 protein_coding protein_coding MGP_LPJ_T0080223.1 MGP_LPJ_G0031248.1 mouse_genomes_project 6 133371532 133385427 - MGP_LPJ_P0080223 Olr1 protein_coding protein_coding MGP_LPJ_T0080224.1 MGP_LPJ_G0031248.1 mouse_genomes_project 6 133388526 133395770 - MGP_LPJ_P0080224 Olr1 protein_coding protein_coding MGP_LPJ_T0080373.1 MGP_LPJ_G0031316.1 mouse_genomes_project 6 139392816 139397975 + MGP_LPJ_P0080373 Apold1 protein_coding protein_coding MGP_LPJ_T0078365.1 MGP_LPJ_G0030873.1 mouse_genomes_project 6 87762760 87798096 + MGP_LPJ_P0078365 C87436 protein_coding protein_coding MGP_LPJ_T0078366.1 MGP_LPJ_G0030873.1 mouse_genomes_project 6 87762775 87772563 + MGP_LPJ_P0078366 C87436 protein_coding protein_coding MGP_LPJ_T0078367.1 MGP_LPJ_G0030873.1 mouse_genomes_project 6 87763078 87798096 + MGP_LPJ_P0078367 C87436 protein_coding protein_coding MGP_LPJ_T0078368.1 MGP_LPJ_G0030873.1 mouse_genomes_project 6 87763078 87798096 + MGP_LPJ_P0078368 C87436 protein_coding nonsense_mediated_decay MGP_LPJ_T0078369.1 MGP_LPJ_G0030873.1 mouse_genomes_project 6 87763094 87763874 + C87436 protein_coding processed_transcript MGP_LPJ_T0078370.1 MGP_LPJ_G0030873.1 mouse_genomes_project 6 87763113 87798096 + MGP_LPJ_P0078370 C87436 protein_coding protein_coding MGP_LPJ_T0078371.1 MGP_LPJ_G0030873.1 mouse_genomes_project 6 87770572 87801213 + MGP_LPJ_P0078371 C87436 protein_coding nonsense_mediated_decay MGP_LPJ_T0078372.1 MGP_LPJ_G0030873.1 mouse_genomes_project 6 87791753 87797655 + C87436 protein_coding processed_transcript MGP_LPJ_T0005105.1 MGP_LPJ_G0004356.1 mouse_genomes_project 6 128401412 128411714 + A230083G16Rik antisense antisense MGP_LPJ_T0099650.1 MGP_LPJ_G0037913.1 mouse_genomes_project 6 52704690 52704854 + Gm25818 snRNA snRNA MGP_LPJ_T0002011.1 MGP_LPJ_G0001921.1 mouse_genomes_project 6 50024049 50025015 + TEC TEC MGP_LPJ_T0002083.1 MGP_LPJ_G0001993.1 mouse_genomes_project 6 88530801 88532852 - TEC TEC MGP_LPJ_T0015558.1 MGP_LPJ_G0013649.1 mouse_genomes_project 6 130885409 130885856 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102274.1 MGP_LPJ_G0040311.1 mouse_genomes_project 6 137063754 137064746 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0079715.1 MGP_LPJ_G0031133.1 mouse_genomes_project 6 126189470 126206412 + MGP_LPJ_P0079715 Necap1 protein_coding protein_coding MGP_LPJ_T0079716.1 MGP_LPJ_G0031133.1 mouse_genomes_project 6 126189545 126191066 + Necap1 protein_coding processed_transcript MGP_LPJ_T0079717.1 MGP_LPJ_G0031133.1 mouse_genomes_project 6 126189567 126197499 + Necap1 protein_coding retained_intron MGP_LPJ_T0079718.1 MGP_LPJ_G0031133.1 mouse_genomes_project 6 126189577 126196214 + Necap1 protein_coding retained_intron MGP_LPJ_T0010827.1 MGP_LPJ_G0008945.1 mouse_genomes_project 6 124260563 124260642 - Gm24855 miRNA miRNA MGP_LPJ_T0100936.1 MGP_LPJ_G0039199.1 mouse_genomes_project 6 139568029 139568163 + Gm22881 snoRNA snoRNA MGP_LPJ_T0077580.1 MGP_LPJ_G0030715.1 mouse_genomes_project 6 57752490 57753608 - MGP_LPJ_P0077580 Vmn1r19 protein_coding protein_coding MGP_LPJ_T0008569.1 MGP_LPJ_G0006934.1 mouse_genomes_project 6 32162592 32170013 - Gm13853 lincRNA lincRNA MGP_LPJ_T0015184.1 MGP_LPJ_G0013275.1 mouse_genomes_project 6 3175221 3175454 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015477.1 MGP_LPJ_G0013568.1 mouse_genomes_project 6 106533990 106534442 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000365.1 MGP_LPJ_G0000303.1 mouse_genomes_project 6 70902607 70903182 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0002047.1 MGP_LPJ_G0001957.1 mouse_genomes_project 6 78029325 78030169 - TEC TEC MGP_LPJ_T0002147.1 MGP_LPJ_G0002057.1 mouse_genomes_project 6 115858039 115859089 - TEC TEC MGP_LPJ_T0079703.1 MGP_LPJ_G0031130.1 mouse_genomes_project 6 126026492 126044324 - MGP_LPJ_P0079703 Slc2a3 protein_coding protein_coding MGP_LPJ_T0079704.1 MGP_LPJ_G0031130.1 mouse_genomes_project 6 126026509 126044101 - Slc2a3 protein_coding retained_intron MGP_LPJ_T0079705.1 MGP_LPJ_G0031130.1 mouse_genomes_project 6 126028614 126043969 - MGP_LPJ_P0079705 Slc2a3 protein_coding nonsense_mediated_decay MGP_LPJ_T0079706.1 MGP_LPJ_G0031130.1 mouse_genomes_project 6 126030012 126033999 - Slc2a3 protein_coding retained_intron MGP_LPJ_T0079707.1 MGP_LPJ_G0031130.1 mouse_genomes_project 6 126038644 126110837 - MGP_LPJ_P0079707 Slc2a3 protein_coding protein_coding MGP_LPJ_T0079708.1 MGP_LPJ_G0031130.1 mouse_genomes_project 6 126038837 126084382 - MGP_LPJ_P0079708 Slc2a3 protein_coding nonsense_mediated_decay MGP_LPJ_T0079709.1 MGP_LPJ_G0031130.1 mouse_genomes_project 6 126041392 126043841 - MGP_LPJ_P0079709 Slc2a3 protein_coding protein_coding MGP_LPJ_T0079710.1 MGP_LPJ_G0031130.1 mouse_genomes_project 6 126041451 126044499 - MGP_LPJ_P0079710 Slc2a3 protein_coding protein_coding MGP_LPJ_T0098663.1 MGP_LPJ_G0036933.1 mouse_genomes_project 6 149708950 149711244 - Sox5it sense_intronic sense_intronic MGP_LPJ_T0078614.1 MGP_LPJ_G0030919.1 mouse_genomes_project 6 91216235 91222933 + MGP_LPJ_P0078614 Vmn1r41 protein_coding protein_coding MGP_LPJ_T0010771.1 MGP_LPJ_G0008889.1 mouse_genomes_project 6 26916477 26916550 + Mir129-1 miRNA miRNA MGP_LPJ_T0002102.1 MGP_LPJ_G0002012.1 mouse_genomes_project 6 90826930 90828352 + TEC TEC MGP_LPJ_T0008749.1 MGP_LPJ_G0007074.1 mouse_genomes_project 6 132326118 132328512 - Gm44009 lincRNA lincRNA MGP_LPJ_T0076775.1 MGP_LPJ_G0030485.1 mouse_genomes_project 6 36376576 36379653 - Atp6v0a4 protein_coding processed_transcript MGP_LPJ_T0076776.1 MGP_LPJ_G0030485.1 mouse_genomes_project 6 36376576 36445331 - MGP_LPJ_P0076776 Atp6v0a4 protein_coding protein_coding MGP_LPJ_T0076777.1 MGP_LPJ_G0030485.1 mouse_genomes_project 6 36376576 36461258 - MGP_LPJ_P0076777 Atp6v0a4 protein_coding protein_coding MGP_LPJ_T0076778.1 MGP_LPJ_G0030485.1 mouse_genomes_project 6 36379372 36384001 - Atp6v0a4 protein_coding retained_intron MGP_LPJ_T0076779.1 MGP_LPJ_G0030485.1 mouse_genomes_project 6 36411096 36415554 - Atp6v0a4 protein_coding retained_intron MGP_LPJ_T0076780.1 MGP_LPJ_G0030485.1 mouse_genomes_project 6 36422797 36431264 - Atp6v0a4 protein_coding retained_intron MGP_LPJ_T0076781.1 MGP_LPJ_G0030485.1 mouse_genomes_project 6 36427757 36461161 - Atp6v0a4 protein_coding retained_intron MGP_LPJ_T0002041.1 MGP_LPJ_G0001951.1 mouse_genomes_project 6 73118511 73119743 - TEC TEC MGP_LPJ_T0099688.1 MGP_LPJ_G0037951.1 mouse_genomes_project 6 154310387 154310494 - Gm22578 snRNA snRNA MGP_LPJ_T0002051.1 MGP_LPJ_G0001961.1 mouse_genomes_project 6 78189211 78192275 - TEC TEC MGP_LPJ_T0077980.1 MGP_LPJ_G0030803.1 mouse_genomes_project 6 83576296 83671384 - Pole4 protein_coding processed_transcript MGP_LPJ_T0077981.1 MGP_LPJ_G0030803.1 mouse_genomes_project 6 83579161 83608736 - MGP_LPJ_P0077981 Pole4 protein_coding protein_coding MGP_LPJ_T0077982.1 MGP_LPJ_G0030803.1 mouse_genomes_project 6 83602566 83608795 - MGP_LPJ_P0077982 Pole4 protein_coding protein_coding MGP_LPJ_T0077983.1 MGP_LPJ_G0030803.1 mouse_genomes_project 6 83603181 83608386 - Pole4 protein_coding processed_transcript MGP_LPJ_T0077984.1 MGP_LPJ_G0030803.1 mouse_genomes_project 6 83603708 83608384 - Pole4 protein_coding processed_transcript MGP_LPJ_T0080315.1 MGP_LPJ_G0031302.1 mouse_genomes_project 6 137296948 137297876 - MGP_LPJ_P0080315 Tas2r103 protein_coding protein_coding MGP_LPJ_T0077355.1 MGP_LPJ_G0030649.1 mouse_genomes_project 6 51434381 51440269 - MGP_LPJ_P0077355 Hoxa7 protein_coding nonsense_mediated_decay MGP_LPJ_T0077356.1 MGP_LPJ_G0030649.1 mouse_genomes_project 6 51434388 51437381 - MGP_LPJ_P0077356 Hoxa7 protein_coding protein_coding MGP_LPJ_T0077357.1 MGP_LPJ_G0030649.1 mouse_genomes_project 6 51435629 51438587 - MGP_LPJ_P0077357 Hoxa7 protein_coding protein_coding MGP_LPJ_T0077358.1 MGP_LPJ_G0030649.1 mouse_genomes_project 6 51435885 51441712 - MGP_LPJ_P0077358 Hoxa7 protein_coding protein_coding MGP_LPJ_T0077359.1 MGP_LPJ_G0030649.1 mouse_genomes_project 6 51436316 51437328 - MGP_LPJ_P0077359 Hoxa7 protein_coding protein_coding MGP_LPJ_T0080203.1 MGP_LPJ_G0031243.1 mouse_genomes_project 6 133220885 133239338 + MGP_LPJ_P0080203 Clec12a protein_coding protein_coding MGP_LPJ_T0080204.1 MGP_LPJ_G0031243.1 mouse_genomes_project 6 133227887 133233239 + Clec12a protein_coding retained_intron MGP_LPJ_T0080205.1 MGP_LPJ_G0031243.1 mouse_genomes_project 6 133228109 133247451 + MGP_LPJ_P0080205 Clec12a protein_coding protein_coding MGP_LPJ_T0080206.1 MGP_LPJ_G0031243.1 mouse_genomes_project 6 133236416 133246564 + Clec12a protein_coding retained_intron MGP_LPJ_T0002215.1 MGP_LPJ_G0002124.1 mouse_genomes_project 6 154140436 154141894 - TEC TEC MGP_LPJ_T0015313.1 MGP_LPJ_G0013404.1 mouse_genomes_project 6 57576767 57577939 + processed_pseudogene processed_pseudogene MGP_LPJ_T0080640.1 MGP_LPJ_G0031373.1 mouse_genomes_project 6 147527006 147647838 - MGP_LPJ_P0080640 Abcc9 protein_coding protein_coding MGP_LPJ_T0080641.1 MGP_LPJ_G0031373.1 mouse_genomes_project 6 147527006 147647782 - MGP_LPJ_P0080641 Abcc9 protein_coding protein_coding MGP_LPJ_T0080642.1 MGP_LPJ_G0031373.1 mouse_genomes_project 6 147527006 147647838 - MGP_LPJ_P0080642 Abcc9 protein_coding protein_coding MGP_LPJ_T0080643.1 MGP_LPJ_G0031373.1 mouse_genomes_project 6 147528274 147647782 - MGP_LPJ_P0080643 Abcc9 protein_coding protein_coding MGP_LPJ_T0080644.1 MGP_LPJ_G0031373.1 mouse_genomes_project 6 147533115 147647837 - MGP_LPJ_P0080644 Abcc9 protein_coding protein_coding MGP_LPJ_T0080645.1 MGP_LPJ_G0031373.1 mouse_genomes_project 6 147637623 147647879 - MGP_LPJ_P0080645 Abcc9 protein_coding protein_coding MGP_LPJ_T0100931.1 MGP_LPJ_G0039194.1 mouse_genomes_project 6 127769758 127769890 - Gm25311 snoRNA snoRNA MGP_LPJ_T0100889.1 MGP_LPJ_G0039152.1 mouse_genomes_project 6 54309466 54309595 + Gm24230 snoRNA snoRNA MGP_LPJ_T0015198.1 MGP_LPJ_G0013289.1 mouse_genomes_project 6 7326511 7327136 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010795.1 MGP_LPJ_G0008913.1 mouse_genomes_project 6 71668755 71668886 + Mir8112 miRNA miRNA MGP_LPJ_T0078849.1 MGP_LPJ_G0030977.1 mouse_genomes_project 6 99705772 99928516 + MGP_LPJ_P0078849 Mitf protein_coding protein_coding MGP_LPJ_T0078850.1 MGP_LPJ_G0030977.1 mouse_genomes_project 6 99705778 99845352 + Mitf protein_coding retained_intron MGP_LPJ_T0078851.1 MGP_LPJ_G0030977.1 mouse_genomes_project 6 99705778 99931272 + MGP_LPJ_P0078851 Mitf protein_coding protein_coding MGP_LPJ_T0078852.1 MGP_LPJ_G0030977.1 mouse_genomes_project 6 99833005 99928630 + MGP_LPJ_P0078852 Mitf protein_coding protein_coding MGP_LPJ_T0078853.1 MGP_LPJ_G0030977.1 mouse_genomes_project 6 99844090 99928630 + MGP_LPJ_P0078853 Mitf protein_coding protein_coding MGP_LPJ_T0078854.1 MGP_LPJ_G0030977.1 mouse_genomes_project 6 99900594 99928630 + MGP_LPJ_P0078854 Mitf protein_coding protein_coding MGP_LPJ_T0078855.1 MGP_LPJ_G0030977.1 mouse_genomes_project 6 99900621 99928420 + MGP_LPJ_P0078855 Mitf protein_coding nonsense_mediated_decay MGP_LPJ_T0078856.1 MGP_LPJ_G0030977.1 mouse_genomes_project 6 99900723 99928098 + MGP_LPJ_P0078856 Mitf protein_coding protein_coding MGP_LPJ_T0018268.1 MGP_LPJ_G0015568.1 mouse_genomes_project 6 147763605 147783452 + Gm7457 processed_transcript antisense MGP_LPJ_T0018269.1 MGP_LPJ_G0015568.1 mouse_genomes_project 6 147763758 147766309 + Gm7457 processed_transcript retained_intron MGP_LPJ_T0015348.1 MGP_LPJ_G0013439.1 mouse_genomes_project 6 65747100 65747665 + processed_pseudogene processed_pseudogene MGP_LPJ_T0076944.1 MGP_LPJ_G0030528.1 mouse_genomes_project 6 39519115 39524357 - MGP_LPJ_P0076944 2210010C04Rik protein_coding protein_coding MGP_LPJ_T0079750.1 MGP_LPJ_G0031145.1 mouse_genomes_project 6 127120110 127173339 + MGP_LPJ_P0079750 Vmn2r23 protein_coding protein_coding MGP_LPJ_T0079979.1 MGP_LPJ_G0031187.1 mouse_genomes_project 6 128665028 128666311 - Ncapd2 protein_coding retained_intron MGP_LPJ_T0079980.1 MGP_LPJ_G0031187.1 mouse_genomes_project 6 128665028 128689802 - MGP_LPJ_P0079980 Ncapd2 protein_coding protein_coding MGP_LPJ_T0079981.1 MGP_LPJ_G0031187.1 mouse_genomes_project 6 128666865 128668119 - Ncapd2 protein_coding retained_intron MGP_LPJ_T0079982.1 MGP_LPJ_G0031187.1 mouse_genomes_project 6 128667969 128668835 - Ncapd2 protein_coding retained_intron MGP_LPJ_T0079983.1 MGP_LPJ_G0031187.1 mouse_genomes_project 6 128668080 128670944 - Ncapd2 protein_coding retained_intron MGP_LPJ_T0079984.1 MGP_LPJ_G0031187.1 mouse_genomes_project 6 128668860 128670926 - Ncapd2 protein_coding retained_intron MGP_LPJ_T0079985.1 MGP_LPJ_G0031187.1 mouse_genomes_project 6 128670390 128671565 - Ncapd2 protein_coding retained_intron MGP_LPJ_T0079986.1 MGP_LPJ_G0031187.1 mouse_genomes_project 6 128670485 128673743 - Ncapd2 protein_coding retained_intron MGP_LPJ_T0079987.1 MGP_LPJ_G0031187.1 mouse_genomes_project 6 128672856 128674395 - Ncapd2 protein_coding retained_intron MGP_LPJ_T0079988.1 MGP_LPJ_G0031187.1 mouse_genomes_project 6 128674218 128676450 - Ncapd2 protein_coding retained_intron MGP_LPJ_T0079989.1 MGP_LPJ_G0031187.1 mouse_genomes_project 6 128682358 128689704 - MGP_LPJ_P0079989 Ncapd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0079990.1 MGP_LPJ_G0031187.1 mouse_genomes_project 6 128682582 128684658 - Ncapd2 protein_coding retained_intron MGP_LPJ_T0079991.1 MGP_LPJ_G0031187.1 mouse_genomes_project 6 128683855 128689591 - MGP_LPJ_P0079991 Ncapd2 protein_coding protein_coding MGP_LPJ_T0010813.1 MGP_LPJ_G0008931.1 mouse_genomes_project 6 107696416 107696496 + Gm25570 miRNA miRNA MGP_LPJ_T0005130.1 MGP_LPJ_G0004377.1 mouse_genomes_project 6 139717434 139771890 + Gm44276 antisense antisense MGP_LPJ_T0015401.1 MGP_LPJ_G0013492.1 mouse_genomes_project 6 76006641 76007610 - processed_pseudogene processed_pseudogene MGP_LPJ_T0080358.1 MGP_LPJ_G0031314.1 mouse_genomes_project 6 139271056 139302154 - MGP_LPJ_P0080358 Gpr19 protein_coding protein_coding MGP_LPJ_T0080359.1 MGP_LPJ_G0031314.1 mouse_genomes_project 6 139271056 139302044 - MGP_LPJ_P0080359 Gpr19 protein_coding protein_coding MGP_LPJ_T0080360.1 MGP_LPJ_G0031314.1 mouse_genomes_project 6 139271071 139302087 - MGP_LPJ_P0080360 Gpr19 protein_coding protein_coding MGP_LPJ_T0080361.1 MGP_LPJ_G0031314.1 mouse_genomes_project 6 139271120 139290184 - MGP_LPJ_P0080361 Gpr19 protein_coding protein_coding MGP_LPJ_T0080362.1 MGP_LPJ_G0031314.1 mouse_genomes_project 6 139271125 139302092 - MGP_LPJ_P0080362 Gpr19 protein_coding protein_coding MGP_LPJ_T0080363.1 MGP_LPJ_G0031314.1 mouse_genomes_project 6 139272000 139302054 - MGP_LPJ_P0080363 Gpr19 protein_coding protein_coding MGP_LPJ_T0080364.1 MGP_LPJ_G0031314.1 mouse_genomes_project 6 139272171 139302044 - MGP_LPJ_P0080364 Gpr19 protein_coding protein_coding MGP_LPJ_T0080365.1 MGP_LPJ_G0031314.1 mouse_genomes_project 6 139272212 139290120 - MGP_LPJ_P0080365 Gpr19 protein_coding protein_coding MGP_LPJ_T0080366.1 MGP_LPJ_G0031314.1 mouse_genomes_project 6 139279206 139302116 - Gpr19 protein_coding processed_transcript MGP_LPJ_T0080367.1 MGP_LPJ_G0031314.1 mouse_genomes_project 6 139289242 139301316 - Gpr19 protein_coding processed_transcript MGP_LPJ_T0080368.1 MGP_LPJ_G0031314.1 mouse_genomes_project 6 139290002 139302799 - Gpr19 protein_coding processed_transcript MGP_LPJ_T0080369.1 MGP_LPJ_G0031314.1 mouse_genomes_project 6 139300929 139302154 - Gpr19 protein_coding processed_transcript MGP_LPJ_T0002705.1 MGP_LPJ_G0002585.1 mouse_genomes_project 6 39545576 39546069 + MGP_LPJ_P0002705 Trbv4 TR_V_gene TR_V_gene MGP_LPJ_T0080195.1 MGP_LPJ_G0031240.1 mouse_genomes_project 6 133042781 133055839 + MGP_LPJ_P0080195 Clec2d protein_coding protein_coding MGP_LPJ_T0076598.1 MGP_LPJ_G0030451.1 mouse_genomes_project 6 28984172 28991827 - Tsga13 protein_coding processed_transcript MGP_LPJ_T0076599.1 MGP_LPJ_G0030451.1 mouse_genomes_project 6 28984172 29003875 - MGP_LPJ_P0076599 Tsga13 protein_coding protein_coding MGP_LPJ_T0076600.1 MGP_LPJ_G0030451.1 mouse_genomes_project 6 28984406 28988860 - Tsga13 protein_coding retained_intron MGP_LPJ_T0015631.1 MGP_LPJ_G0013722.1 mouse_genomes_project 6 154298861 154299184 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098650.1 MGP_LPJ_G0036920.1 mouse_genomes_project 6 46855836 46856244 - sense_intronic sense_intronic MGP_LPJ_T0000314.1 MGP_LPJ_G0000252.1 mouse_genomes_project 6 67737552 67737805 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0015482.1 MGP_LPJ_G0013573.1 mouse_genomes_project 6 109809476 109810125 + processed_pseudogene processed_pseudogene MGP_LPJ_T0077750.1 MGP_LPJ_G0030757.1 mouse_genomes_project 6 71792074 71844037 - MGP_LPJ_P0077750 Rmnd5a protein_coding protein_coding MGP_LPJ_T0077751.1 MGP_LPJ_G0030757.1 mouse_genomes_project 6 71793905 71799721 - Rmnd5a protein_coding processed_transcript MGP_LPJ_T0077752.1 MGP_LPJ_G0030757.1 mouse_genomes_project 6 71794772 71799626 - Rmnd5a protein_coding processed_transcript MGP_LPJ_T0077753.1 MGP_LPJ_G0030757.1 mouse_genomes_project 6 71797898 71800637 - Rmnd5a protein_coding retained_intron MGP_LPJ_T0077913.1 MGP_LPJ_G0030785.1 mouse_genomes_project 6 73532834 73739268 - MGP_LPJ_P0077913 Dnah6 protein_coding protein_coding MGP_LPJ_T0077914.1 MGP_LPJ_G0030785.1 mouse_genomes_project 6 73532837 73739288 - MGP_LPJ_P0077914 Dnah6 protein_coding protein_coding MGP_LPJ_T0077915.1 MGP_LPJ_G0030785.1 mouse_genomes_project 6 73532970 73737440 - MGP_LPJ_P0077915 Dnah6 protein_coding protein_coding MGP_LPJ_T0077916.1 MGP_LPJ_G0030785.1 mouse_genomes_project 6 73607868 73656474 - Dnah6 protein_coding retained_intron MGP_LPJ_T0015305.1 MGP_LPJ_G0013396.1 mouse_genomes_project 6 51576510 51576791 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008589.1 MGP_LPJ_G0006944.1 mouse_genomes_project 6 39542061 39549285 + 5830405F06Rik lincRNA lincRNA MGP_LPJ_T0008590.1 MGP_LPJ_G0006944.1 mouse_genomes_project 6 39542062 39547327 + 5830405F06Rik lincRNA lincRNA MGP_LPJ_T0008555.1 MGP_LPJ_G0006924.1 mouse_genomes_project 6 29470581 29505019 - Mkln1os lincRNA lincRNA MGP_LPJ_T0008557.1 MGP_LPJ_G0006924.1 mouse_genomes_project 6 29486735 29504999 - Mkln1os lincRNA lincRNA MGP_LPJ_T0008558.1 MGP_LPJ_G0006924.1 mouse_genomes_project 6 29488382 29505005 - Mkln1os lincRNA lincRNA MGP_LPJ_T0102208.1 MGP_LPJ_G0040245.1 mouse_genomes_project 6 26333041 26338673 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0079022.1 MGP_LPJ_G0031011.1 mouse_genomes_project 6 115616184 115647396 + Setd5 protein_coding retained_intron MGP_LPJ_T0079023.1 MGP_LPJ_G0031011.1 mouse_genomes_project 6 115616184 115694541 + MGP_LPJ_P0079023 Setd5 protein_coding protein_coding MGP_LPJ_T0079024.1 MGP_LPJ_G0031011.1 mouse_genomes_project 6 115616380 115646154 + Setd5 protein_coding processed_transcript MGP_LPJ_T0079025.1 MGP_LPJ_G0031011.1 mouse_genomes_project 6 115616421 115657452 + Setd5 protein_coding processed_transcript MGP_LPJ_T0079026.1 MGP_LPJ_G0031011.1 mouse_genomes_project 6 115616458 115694530 + MGP_LPJ_P0079026 Setd5 protein_coding protein_coding MGP_LPJ_T0079027.1 MGP_LPJ_G0031011.1 mouse_genomes_project 6 115644769 115678636 + Setd5 protein_coding processed_transcript MGP_LPJ_T0079028.1 MGP_LPJ_G0031011.1 mouse_genomes_project 6 115644871 115694541 + MGP_LPJ_P0079028 Setd5 protein_coding protein_coding MGP_LPJ_T0079029.1 MGP_LPJ_G0031011.1 mouse_genomes_project 6 115648585 115692576 + MGP_LPJ_P0079029 Setd5 protein_coding unknown_likely_coding MGP_LPJ_T0079030.1 MGP_LPJ_G0031011.1 mouse_genomes_project 6 115648707 115657766 + Setd5 protein_coding retained_intron MGP_LPJ_T0079031.1 MGP_LPJ_G0031011.1 mouse_genomes_project 6 115649699 115692941 + Setd5 protein_coding retained_intron MGP_LPJ_T0079032.1 MGP_LPJ_G0031011.1 mouse_genomes_project 6 115650251 115653524 + Setd5 protein_coding retained_intron MGP_LPJ_T0079033.1 MGP_LPJ_G0031011.1 mouse_genomes_project 6 115650251 115657421 + Setd5 protein_coding retained_intron MGP_LPJ_T0079034.1 MGP_LPJ_G0031011.1 mouse_genomes_project 6 115665725 115670759 + Setd5 protein_coding retained_intron MGP_LPJ_T0079035.1 MGP_LPJ_G0031011.1 mouse_genomes_project 6 115668125 115692962 + Setd5 protein_coding retained_intron MGP_LPJ_T0079036.1 MGP_LPJ_G0031011.1 mouse_genomes_project 6 115669057 115678872 + Setd5 protein_coding processed_transcript MGP_LPJ_T0011643.1 MGP_LPJ_G0009761.1 mouse_genomes_project 6 15278239 15278376 + Gm27444 misc_RNA misc_RNA MGP_LPJ_T0076623.1 MGP_LPJ_G0030457.1 mouse_genomes_project 6 30932956 31034741 - MGP_LPJ_P0076623 Chchd3 protein_coding protein_coding MGP_LPJ_T0076624.1 MGP_LPJ_G0030457.1 mouse_genomes_project 6 30934197 31208879 - MGP_LPJ_P0076624 Chchd3 protein_coding protein_coding MGP_LPJ_T0076625.1 MGP_LPJ_G0030457.1 mouse_genomes_project 6 30934204 31208855 - MGP_LPJ_P0076625 Chchd3 protein_coding nonsense_mediated_decay MGP_LPJ_T0076626.1 MGP_LPJ_G0030457.1 mouse_genomes_project 6 30934617 31039576 - Chchd3 protein_coding processed_transcript MGP_LPJ_T0076627.1 MGP_LPJ_G0030457.1 mouse_genomes_project 6 30934622 31039533 - Chchd3 protein_coding processed_transcript MGP_LPJ_T0076628.1 MGP_LPJ_G0030457.1 mouse_genomes_project 6 30934623 31039526 - Chchd3 protein_coding processed_transcript MGP_LPJ_T0076629.1 MGP_LPJ_G0030457.1 mouse_genomes_project 6 30934634 30947028 - Chchd3 protein_coding processed_transcript MGP_LPJ_T0076630.1 MGP_LPJ_G0030457.1 mouse_genomes_project 6 30934674 30964434 - Chchd3 protein_coding processed_transcript MGP_LPJ_T0076631.1 MGP_LPJ_G0030457.1 mouse_genomes_project 6 30947023 31208856 - MGP_LPJ_P0076631 Chchd3 protein_coding protein_coding MGP_LPJ_T0076632.1 MGP_LPJ_G0030457.1 mouse_genomes_project 6 30995460 31208836 - MGP_LPJ_P0076632 Chchd3 protein_coding protein_coding MGP_LPJ_T0002005.1 MGP_LPJ_G0001915.1 mouse_genomes_project 6 44886664 44892164 + TEC TEC MGP_LPJ_T0001996.1 MGP_LPJ_G0001906.1 mouse_genomes_project 6 44031986 44032545 + TEC TEC MGP_LPJ_T0008712.1 MGP_LPJ_G0007039.1 mouse_genomes_project 6 103974108 103980964 + Gm44176 lincRNA lincRNA MGP_LPJ_T0100883.1 MGP_LPJ_G0039146.1 mouse_genomes_project 6 42524704 42524835 + Gm22939 snoRNA snoRNA MGP_LPJ_T0077873.1 MGP_LPJ_G0030777.1 mouse_genomes_project 6 72978584 72980231 - Sh2d6 protein_coding processed_transcript MGP_LPJ_T0077874.1 MGP_LPJ_G0030777.1 mouse_genomes_project 6 72978594 72987134 - MGP_LPJ_P0077874 Sh2d6 protein_coding protein_coding MGP_LPJ_T0077875.1 MGP_LPJ_G0030777.1 mouse_genomes_project 6 72978596 72987223 - MGP_LPJ_P0077875 Sh2d6 protein_coding protein_coding MGP_LPJ_T0077876.1 MGP_LPJ_G0030777.1 mouse_genomes_project 6 72978596 72987246 - MGP_LPJ_P0077876 Sh2d6 protein_coding protein_coding MGP_LPJ_T0077877.1 MGP_LPJ_G0030777.1 mouse_genomes_project 6 72980267 72986573 - Sh2d6 protein_coding processed_transcript MGP_LPJ_T0077878.1 MGP_LPJ_G0030777.1 mouse_genomes_project 6 72982349 72988230 - Sh2d6 protein_coding retained_intron MGP_LPJ_T0100917.1 MGP_LPJ_G0039180.1 mouse_genomes_project 6 118377976 118378114 - Gm24008 snoRNA snoRNA MGP_LPJ_T0000172.1 MGP_LPJ_G0000127.1 mouse_genomes_project 6 68268152 68268633 + MGP_LPJ_P0000172 Igkv14-111 IG_V_gene IG_V_gene MGP_LPJ_T0078032.1 MGP_LPJ_G0030811.1 mouse_genomes_project 6 84055426 84064910 + MGP_LPJ_P0078032 Dqx1 protein_coding protein_coding MGP_LPJ_T0078033.1 MGP_LPJ_G0030811.1 mouse_genomes_project 6 84055679 84057571 + MGP_LPJ_P0078033 Dqx1 protein_coding non_stop_decay MGP_LPJ_T0015314.1 MGP_LPJ_G0013405.1 mouse_genomes_project 6 57619802 57620061 + processed_pseudogene processed_pseudogene MGP_LPJ_T0080773.1 MGP_LPJ_G0031392.1 mouse_genomes_project 6 151693292 151710368 + MGP_LPJ_P0080773 Fgfr1op2 protein_coding protein_coding MGP_LPJ_T0080774.1 MGP_LPJ_G0031392.1 mouse_genomes_project 6 151693952 151716564 + MGP_LPJ_P0080774 Fgfr1op2 protein_coding protein_coding MGP_LPJ_T0080775.1 MGP_LPJ_G0031392.1 mouse_genomes_project 6 151693952 151716564 + MGP_LPJ_P0080775 Fgfr1op2 protein_coding protein_coding MGP_LPJ_T0080776.1 MGP_LPJ_G0031392.1 mouse_genomes_project 6 151694014 151710368 + MGP_LPJ_P0080776 Fgfr1op2 protein_coding protein_coding MGP_LPJ_T0080777.1 MGP_LPJ_G0031392.1 mouse_genomes_project 6 151694033 151707458 + Fgfr1op2 protein_coding processed_transcript MGP_LPJ_T0080778.1 MGP_LPJ_G0031392.1 mouse_genomes_project 6 151694035 151704750 + Fgfr1op2 protein_coding retained_intron MGP_LPJ_T0080779.1 MGP_LPJ_G0031392.1 mouse_genomes_project 6 151705761 151714787 + Fgfr1op2 protein_coding processed_transcript MGP_LPJ_T0008643.1 MGP_LPJ_G0006987.1 mouse_genomes_project 6 71756390 71762869 - Gm44175 lincRNA lincRNA MGP_LPJ_T0077686.1 MGP_LPJ_G0030741.1 mouse_genomes_project 6 66786591 66920564 + MGP_LPJ_P0077686 Gng12 protein_coding protein_coding MGP_LPJ_T0077687.1 MGP_LPJ_G0030741.1 mouse_genomes_project 6 66786617 66917143 + MGP_LPJ_P0077687 Gng12 protein_coding protein_coding MGP_LPJ_T0077688.1 MGP_LPJ_G0030741.1 mouse_genomes_project 6 66786625 66917487 + MGP_LPJ_P0077688 Gng12 protein_coding protein_coding MGP_LPJ_T0077689.1 MGP_LPJ_G0030741.1 mouse_genomes_project 6 66786628 66917503 + MGP_LPJ_P0077689 Gng12 protein_coding protein_coding MGP_LPJ_T0077690.1 MGP_LPJ_G0030741.1 mouse_genomes_project 6 66786631 66917115 + MGP_LPJ_P0077690 Gng12 protein_coding protein_coding MGP_LPJ_T0077691.1 MGP_LPJ_G0030741.1 mouse_genomes_project 6 66786634 66918300 + MGP_LPJ_P0077691 Gng12 protein_coding protein_coding MGP_LPJ_T0077692.1 MGP_LPJ_G0030741.1 mouse_genomes_project 6 66786650 66917062 + MGP_LPJ_P0077692 Gng12 protein_coding protein_coding MGP_LPJ_T0077693.1 MGP_LPJ_G0030741.1 mouse_genomes_project 6 66786743 66917360 + MGP_LPJ_P0077693 Gng12 protein_coding protein_coding MGP_LPJ_T0077694.1 MGP_LPJ_G0030741.1 mouse_genomes_project 6 66787085 66916781 + MGP_LPJ_P0077694 Gng12 protein_coding protein_coding MGP_LPJ_T0001997.1 MGP_LPJ_G0001907.1 mouse_genomes_project 6 44126248 44128288 + TEC TEC MGP_LPJ_T0078453.1 MGP_LPJ_G0030894.1 mouse_genomes_project 6 89170928 89198380 - MGP_LPJ_P0078453 Rab43 protein_coding protein_coding MGP_LPJ_T0078454.1 MGP_LPJ_G0030894.1 mouse_genomes_project 6 89170928 89196355 - MGP_LPJ_P0078454 Rab43 protein_coding protein_coding MGP_LPJ_T0078456.1 MGP_LPJ_G0030894.1 mouse_genomes_project 6 89170940 89172151 - Rab43 protein_coding processed_transcript MGP_LPJ_T0078457.1 MGP_LPJ_G0030894.1 mouse_genomes_project 6 89173574 89196358 - Rab43 protein_coding processed_transcript MGP_LPJ_T0078458.1 MGP_LPJ_G0030894.1 mouse_genomes_project 6 89174227 89198765 - Rab43 protein_coding processed_transcript MGP_LPJ_T0078460.1 MGP_LPJ_G0030894.1 mouse_genomes_project 6 89174873 89198699 - Rab43 protein_coding processed_transcript MGP_LPJ_T0078461.1 MGP_LPJ_G0030894.1 mouse_genomes_project 6 89176044 89198380 - MGP_LPJ_P0078461 Rab43 protein_coding protein_coding MGP_LPJ_T0002610.1 MGP_LPJ_G0002507.1 mouse_genomes_project 6 40060679 40060727 + TR_J_pseudogene TR_J_pseudogene MGP_LPJ_T0000238.1 MGP_LPJ_G0000179.1 mouse_genomes_project 6 70571614 70572192 - MGP_LPJ_P0000238 Igkv8-21 IG_V_gene IG_V_gene MGP_LPJ_T0098049.1 MGP_LPJ_G0036330.1 mouse_genomes_project 6 70557825 70558055 + pseudogene pseudogene MGP_LPJ_T0008519.1 MGP_LPJ_G0006900.1 mouse_genomes_project 6 7882851 7953951 + Gm44004 lincRNA lincRNA MGP_LPJ_T0079391.1 MGP_LPJ_G0031076.1 mouse_genomes_project 6 120580912 120584244 + Zfp637 protein_coding retained_intron MGP_LPJ_T0079392.1 MGP_LPJ_G0031076.1 mouse_genomes_project 6 120580912 120584938 + MGP_LPJ_P0079392 Zfp637 protein_coding protein_coding MGP_LPJ_T0079393.1 MGP_LPJ_G0031076.1 mouse_genomes_project 6 120580913 120585245 + MGP_LPJ_P0079393 Zfp637 protein_coding protein_coding MGP_LPJ_T0079394.1 MGP_LPJ_G0031076.1 mouse_genomes_project 6 120580974 120585681 + MGP_LPJ_P0079394 Zfp637 protein_coding protein_coding MGP_LPJ_T0079395.1 MGP_LPJ_G0031076.1 mouse_genomes_project 6 120580978 120585682 + MGP_LPJ_P0079395 Zfp637 protein_coding protein_coding MGP_LPJ_T0079396.1 MGP_LPJ_G0031076.1 mouse_genomes_project 6 120581000 120585139 + MGP_LPJ_P0079396 Zfp637 protein_coding protein_coding MGP_LPJ_T0079397.1 MGP_LPJ_G0031076.1 mouse_genomes_project 6 120581000 120585139 + MGP_LPJ_P0079397 Zfp637 protein_coding protein_coding MGP_LPJ_T0079398.1 MGP_LPJ_G0031076.1 mouse_genomes_project 6 120581013 120585682 + MGP_LPJ_P0079398 Zfp637 protein_coding protein_coding MGP_LPJ_T0079399.1 MGP_LPJ_G0031076.1 mouse_genomes_project 6 120581013 120585139 + MGP_LPJ_P0079399 Zfp637 protein_coding protein_coding MGP_LPJ_T0079400.1 MGP_LPJ_G0031076.1 mouse_genomes_project 6 120582978 120585301 + Zfp637 protein_coding retained_intron MGP_LPJ_T0015193.1 MGP_LPJ_G0013284.1 mouse_genomes_project 6 4739177 4739367 - processed_pseudogene processed_pseudogene MGP_LPJ_T0080628.1 MGP_LPJ_G0031369.1 mouse_genomes_project 6 147340089 147347596 + MGP_LPJ_P0080628 Spx protein_coding unknown_likely_coding MGP_LPJ_T0080629.1 MGP_LPJ_G0031369.1 mouse_genomes_project 6 147342518 147347596 + MGP_LPJ_P0080629 Spx protein_coding protein_coding MGP_LPJ_T0080630.1 MGP_LPJ_G0031369.1 mouse_genomes_project 6 147343093 147348753 + Spx protein_coding retained_intron MGP_LPJ_T0080631.1 MGP_LPJ_G0031369.1 mouse_genomes_project 6 147343602 147348753 + Spx protein_coding retained_intron MGP_LPJ_T0015500.1 MGP_LPJ_G0013591.1 mouse_genomes_project 6 115996183 115996592 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099647.1 MGP_LPJ_G0037910.1 mouse_genomes_project 6 41278916 41279024 - Gm22363 snRNA snRNA MGP_LPJ_T0077378.1 MGP_LPJ_G0030655.1 mouse_genomes_project 6 51776753 51877111 - MGP_LPJ_P0077378 Hibadh protein_coding protein_coding MGP_LPJ_T0077379.1 MGP_LPJ_G0030655.1 mouse_genomes_project 6 51777221 51866982 - Hibadh protein_coding retained_intron MGP_LPJ_T0077380.1 MGP_LPJ_G0030655.1 mouse_genomes_project 6 51779377 51788265 - Hibadh protein_coding retained_intron MGP_LPJ_T0077381.1 MGP_LPJ_G0030655.1 mouse_genomes_project 6 51785763 51787867 - Hibadh protein_coding retained_intron MGP_LPJ_T0077382.1 MGP_LPJ_G0030655.1 mouse_genomes_project 6 51870955 51877037 - Hibadh protein_coding retained_intron MGP_LPJ_T0000155.1 MGP_LPJ_G0000115.1 mouse_genomes_project 6 67747404 67748118 + MGP_LPJ_P0000155 Igkv1-132 IG_V_gene IG_V_gene MGP_LPJ_T0080253.1 MGP_LPJ_G0031258.1 mouse_genomes_project 6 133612076 133624864 - MGP_LPJ_P0080253 Klri2 protein_coding protein_coding MGP_LPJ_T0102280.1 MGP_LPJ_G0040317.1 mouse_genomes_project 6 137352329 137353731 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0078598.1 MGP_LPJ_G0030914.1 mouse_genomes_project 6 90404603 90566511 + MGP_LPJ_P0078598 protein_coding protein_coding MGP_LPJ_T0078599.1 MGP_LPJ_G0030914.1 mouse_genomes_project 6 90552641 90564373 + protein_coding lincRNA MGP_LPJ_T0078600.1 MGP_LPJ_G0030914.1 mouse_genomes_project 6 90552641 90566512 + protein_coding lincRNA MGP_LPJ_T0078601.1 MGP_LPJ_G0030914.1 mouse_genomes_project 6 90557593 90564693 + protein_coding lincRNA MGP_LPJ_T0076945.1 MGP_LPJ_G0030529.1 mouse_genomes_project 6 39802084 39804631 - MGP_LPJ_P0076945 protein_coding protein_coding MGP_LPJ_T0077736.1 MGP_LPJ_G0030752.1 mouse_genomes_project 6 71592586 71597783 + MGP_LPJ_P0077736 Fabp1 protein_coding protein_coding MGP_LPJ_T0015611.1 MGP_LPJ_G0013702.1 mouse_genomes_project 6 144864299 144864804 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102284.1 MGP_LPJ_G0040321.1 mouse_genomes_project 6 137939307 137941329 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0079170.1 MGP_LPJ_G0031035.1 mouse_genomes_project 6 116285639 116289381 - MGP_LPJ_P0079170 Ghrl protein_coding protein_coding MGP_LPJ_T0079171.1 MGP_LPJ_G0031035.1 mouse_genomes_project 6 116285639 116287213 - MGP_LPJ_P0079171 Ghrl protein_coding protein_coding MGP_LPJ_T0079172.1 MGP_LPJ_G0031035.1 mouse_genomes_project 6 116285644 116288959 - MGP_LPJ_P0079172 Ghrl protein_coding protein_coding MGP_LPJ_T0079173.1 MGP_LPJ_G0031035.1 mouse_genomes_project 6 116285652 116289349 - MGP_LPJ_P0079173 Ghrl protein_coding protein_coding MGP_LPJ_T0079174.1 MGP_LPJ_G0031035.1 mouse_genomes_project 6 116285692 116288948 - MGP_LPJ_P0079174 Ghrl protein_coding protein_coding MGP_LPJ_T0079175.1 MGP_LPJ_G0031035.1 mouse_genomes_project 6 116285770 116288930 - MGP_LPJ_P0079175 Ghrl protein_coding protein_coding MGP_LPJ_T0079176.1 MGP_LPJ_G0031035.1 mouse_genomes_project 6 116288677 116288955 - Ghrl protein_coding retained_intron MGP_LPJ_T0076995.1 MGP_LPJ_G0030550.1 mouse_genomes_project 6 40760957 40790168 + MGP_LPJ_P0076995 Clcn1 protein_coding protein_coding MGP_LPJ_T0076996.1 MGP_LPJ_G0030550.1 mouse_genomes_project 6 40761039 40789690 + MGP_LPJ_P0076996 Clcn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0076997.1 MGP_LPJ_G0030550.1 mouse_genomes_project 6 40761128 40789741 + MGP_LPJ_P0076997 Clcn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0076998.1 MGP_LPJ_G0030550.1 mouse_genomes_project 6 40761128 40789690 + MGP_LPJ_P0076998 Clcn1 protein_coding protein_coding MGP_LPJ_T0076999.1 MGP_LPJ_G0030550.1 mouse_genomes_project 6 40761128 40789690 + MGP_LPJ_P0076999 Clcn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0077000.1 MGP_LPJ_G0030550.1 mouse_genomes_project 6 40761128 40789690 + MGP_LPJ_P0077000 Clcn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0077001.1 MGP_LPJ_G0030550.1 mouse_genomes_project 6 40761138 40789469 + MGP_LPJ_P0077001 Clcn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0077002.1 MGP_LPJ_G0030550.1 mouse_genomes_project 6 40773172 40791268 + Clcn1 protein_coding processed_transcript MGP_LPJ_T0077003.1 MGP_LPJ_G0030550.1 mouse_genomes_project 6 40785656 40788576 + MGP_LPJ_P0077003 Clcn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0077004.1 MGP_LPJ_G0030550.1 mouse_genomes_project 6 40788003 40788856 + Clcn1 protein_coding retained_intron MGP_LPJ_T0078710.1 MGP_LPJ_G0030948.1 mouse_genomes_project 6 93070586 93077288 + MGP_LPJ_P0078710 Lsm3 protein_coding protein_coding MGP_LPJ_T0078711.1 MGP_LPJ_G0030948.1 mouse_genomes_project 6 93070615 93074500 + Lsm3 protein_coding retained_intron MGP_LPJ_T0078712.1 MGP_LPJ_G0030948.1 mouse_genomes_project 6 93070635 93072665 + Lsm3 protein_coding retained_intron MGP_LPJ_T0078713.1 MGP_LPJ_G0030948.1 mouse_genomes_project 6 93070705 93072176 + Lsm3 protein_coding retained_intron MGP_LPJ_T0078714.1 MGP_LPJ_G0030948.1 mouse_genomes_project 6 93070706 93077283 + MGP_LPJ_P0078714 Lsm3 protein_coding protein_coding MGP_LPJ_T0079401.1 MGP_LPJ_G0031077.1 mouse_genomes_project 6 120607333 120615353 + Zfp239 protein_coding processed_transcript MGP_LPJ_T0079402.1 MGP_LPJ_G0031077.1 mouse_genomes_project 6 120608310 120615314 + Zfp239 protein_coding processed_transcript MGP_LPJ_T0079403.1 MGP_LPJ_G0031077.1 mouse_genomes_project 6 120608310 120617866 + MGP_LPJ_P0079403 Zfp239 protein_coding protein_coding MGP_LPJ_T0079404.1 MGP_LPJ_G0031077.1 mouse_genomes_project 6 120608310 120617340 + MGP_LPJ_P0079404 Zfp239 protein_coding protein_coding MGP_LPJ_T0079405.1 MGP_LPJ_G0031077.1 mouse_genomes_project 6 120608317 120614494 + Zfp239 protein_coding retained_intron MGP_LPJ_T0079406.1 MGP_LPJ_G0031077.1 mouse_genomes_project 6 120608317 120615309 + Zfp239 protein_coding processed_transcript MGP_LPJ_T0079407.1 MGP_LPJ_G0031077.1 mouse_genomes_project 6 120608317 120615042 + Zfp239 protein_coding processed_transcript MGP_LPJ_T0002115.1 MGP_LPJ_G0002025.1 mouse_genomes_project 6 93592289 93594219 + TEC TEC MGP_LPJ_T0080307.1 MGP_LPJ_G0031294.1 mouse_genomes_project 6 137093250 137094201 + MGP_LPJ_P0080307 Tas2r109 protein_coding protein_coding MGP_LPJ_T0000185.1 MGP_LPJ_G0000137.1 mouse_genomes_project 6 68810569 68811037 - MGP_LPJ_P0000185 Igkv19-93 IG_V_gene IG_V_gene MGP_LPJ_T0000186.1 MGP_LPJ_G0000137.1 mouse_genomes_project 6 68810569 68811053 - MGP_LPJ_P0000186 Igkv19-93 IG_V_gene IG_V_gene MGP_LPJ_T0008709.1 MGP_LPJ_G0007038.1 mouse_genomes_project 6 103908266 103931552 + Gm9871 lincRNA lincRNA MGP_LPJ_T0008710.1 MGP_LPJ_G0007038.1 mouse_genomes_project 6 103916538 103931385 + Gm9871 lincRNA lincRNA MGP_LPJ_T0008711.1 MGP_LPJ_G0007038.1 mouse_genomes_project 6 103925790 103931180 + Gm9871 lincRNA lincRNA MGP_LPJ_T0101583.1 MGP_LPJ_G0039671.1 mouse_genomes_project 6 132835501 132850939 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101584.1 MGP_LPJ_G0039671.1 mouse_genomes_project 6 132835589 132850860 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0076762.1 MGP_LPJ_G0030483.1 mouse_genomes_project 6 36194866 36246746 + Trim24 protein_coding retained_intron MGP_LPJ_T0076763.1 MGP_LPJ_G0030483.1 mouse_genomes_project 6 36194866 36278116 + Trim24 protein_coding retained_intron MGP_LPJ_T0076764.1 MGP_LPJ_G0030483.1 mouse_genomes_project 6 36194866 36297776 + MGP_LPJ_P0076764 Trim24 protein_coding protein_coding MGP_LPJ_T0076765.1 MGP_LPJ_G0030483.1 mouse_genomes_project 6 36194866 36297776 + MGP_LPJ_P0076765 Trim24 protein_coding protein_coding MGP_LPJ_T0076766.1 MGP_LPJ_G0030483.1 mouse_genomes_project 6 36200385 36258363 + Trim24 protein_coding processed_transcript MGP_LPJ_T0076767.1 MGP_LPJ_G0030483.1 mouse_genomes_project 6 36225655 36297412 + MGP_LPJ_P0076767 Trim24 protein_coding protein_coding MGP_LPJ_T0076768.1 MGP_LPJ_G0030483.1 mouse_genomes_project 6 36240612 36253219 + Trim24 protein_coding retained_intron MGP_LPJ_T0076769.1 MGP_LPJ_G0030483.1 mouse_genomes_project 6 36279875 36284942 + Trim24 protein_coding retained_intron MGP_LPJ_T0018175.1 MGP_LPJ_G0015540.1 mouse_genomes_project 6 5395023 5416661 - A430035B10Rik processed_transcript processed_transcript MGP_LPJ_T0018176.1 MGP_LPJ_G0015540.1 mouse_genomes_project 6 5396161 5404208 - A430035B10Rik processed_transcript processed_transcript MGP_LPJ_T0018177.1 MGP_LPJ_G0015540.1 mouse_genomes_project 6 5397268 5415298 - A430035B10Rik processed_transcript processed_transcript MGP_LPJ_T0018178.1 MGP_LPJ_G0015540.1 mouse_genomes_project 6 5398643 5415241 - A430035B10Rik processed_transcript retained_intron MGP_LPJ_T0018179.1 MGP_LPJ_G0015540.1 mouse_genomes_project 6 5413276 5415358 - A430035B10Rik processed_transcript processed_transcript MGP_LPJ_T0080711.1 MGP_LPJ_G0031382.1 mouse_genomes_project 6 150256202 150288195 - Casc1 protein_coding retained_intron MGP_LPJ_T0080712.1 MGP_LPJ_G0031382.1 mouse_genomes_project 6 150256202 150296991 - MGP_LPJ_P0080712 Casc1 protein_coding protein_coding MGP_LPJ_T0080713.1 MGP_LPJ_G0031382.1 mouse_genomes_project 6 150256202 150296812 - MGP_LPJ_P0080713 Casc1 protein_coding protein_coding MGP_LPJ_T0080714.1 MGP_LPJ_G0031382.1 mouse_genomes_project 6 150256309 150296895 - MGP_LPJ_P0080714 Casc1 protein_coding protein_coding MGP_LPJ_T0080715.1 MGP_LPJ_G0031382.1 mouse_genomes_project 6 150273398 150296920 - Casc1 protein_coding retained_intron MGP_LPJ_T0080716.1 MGP_LPJ_G0031382.1 mouse_genomes_project 6 150276109 150296890 - Casc1 protein_coding processed_transcript MGP_LPJ_T0080717.1 MGP_LPJ_G0031382.1 mouse_genomes_project 6 150285731 150296900 - Casc1 protein_coding retained_intron MGP_LPJ_T0080718.1 MGP_LPJ_G0031382.1 mouse_genomes_project 6 150287113 150296930 - Casc1 protein_coding retained_intron MGP_LPJ_T0080719.1 MGP_LPJ_G0031382.1 mouse_genomes_project 6 150294008 150297026 - Casc1 protein_coding retained_intron MGP_LPJ_T0015522.1 MGP_LPJ_G0013613.1 mouse_genomes_project 6 123469633 123469970 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000212.1 MGP_LPJ_G0000161.1 mouse_genomes_project 6 70058100 70058565 - MGP_LPJ_P0000212 Igkv12-41 IG_V_gene IG_V_gene MGP_LPJ_T0004948.1 MGP_LPJ_G0004247.1 mouse_genomes_project 6 30600147 30603728 + Plxna4os2 antisense antisense MGP_LPJ_T0002186.1 MGP_LPJ_G0002095.1 mouse_genomes_project 6 139013692 139014442 + TEC TEC MGP_LPJ_T0005146.1 MGP_LPJ_G0004390.1 mouse_genomes_project 6 149769966 149771308 + Sox5os5 antisense antisense MGP_LPJ_T0001979.1 MGP_LPJ_G0001889.1 mouse_genomes_project 6 34456984 34459388 - TEC TEC MGP_LPJ_T0098428.1 MGP_LPJ_G0036709.1 mouse_genomes_project 6 52266122 52266261 - Gm26215 scaRNA scaRNA MGP_LPJ_T0000330.1 MGP_LPJ_G0000268.1 mouse_genomes_project 6 68494065 68494352 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0001987.1 MGP_LPJ_G0001897.1 mouse_genomes_project 6 43772403 43773719 + TEC TEC MGP_LPJ_T0077948.1 MGP_LPJ_G0030794.1 mouse_genomes_project 6 79130045 79132995 + MGP_LPJ_P0077948 Reg2 protein_coding protein_coding MGP_LPJ_T0098287.1 MGP_LPJ_G0036568.1 mouse_genomes_project 6 59914790 59914909 + n-R5s162 rRNA rRNA MGP_LPJ_T0015547.1 MGP_LPJ_G0013638.1 mouse_genomes_project 6 128441646 128442097 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002016.1 MGP_LPJ_G0001926.1 mouse_genomes_project 6 51958335 51958947 - TEC TEC MGP_LPJ_T0000161.1 MGP_LPJ_G0000119.1 mouse_genomes_project 6 67903727 67904198 + MGP_LPJ_P0000161 Igkv14-126 IG_V_gene IG_V_gene MGP_LPJ_T0080123.1 MGP_LPJ_G0031220.1 mouse_genomes_project 6 132081705 132087510 - MGP_LPJ_P0080123 protein_coding protein_coding MGP_LPJ_T0080124.1 MGP_LPJ_G0031220.1 mouse_genomes_project 6 132082065 132087566 - MGP_LPJ_P0080124 protein_coding protein_coding MGP_LPJ_T0080125.1 MGP_LPJ_G0031220.1 mouse_genomes_project 6 132082070 132087566 - MGP_LPJ_P0080125 protein_coding protein_coding MGP_LPJ_T0080126.1 MGP_LPJ_G0031220.1 mouse_genomes_project 6 132082676 132087276 - MGP_LPJ_P0080126 protein_coding protein_coding MGP_LPJ_T0080127.1 MGP_LPJ_G0031220.1 mouse_genomes_project 6 132083924 132087393 - MGP_LPJ_P0080127 protein_coding protein_coding MGP_LPJ_T0080128.1 MGP_LPJ_G0031220.1 mouse_genomes_project 6 132086577 132087609 - protein_coding processed_transcript MGP_LPJ_T0002057.1 MGP_LPJ_G0001967.1 mouse_genomes_project 6 80863954 80866608 + TEC TEC MGP_LPJ_T0077307.1 MGP_LPJ_G0030635.1 mouse_genomes_project 6 49744987 49748751 - MGP_LPJ_P0077307 Npvf protein_coding protein_coding MGP_LPJ_T0010809.1 MGP_LPJ_G0008927.1 mouse_genomes_project 6 96583036 96583104 + Gm23364 miRNA miRNA MGP_LPJ_T0079657.1 MGP_LPJ_G0031120.1 mouse_genomes_project 6 125499120 125511039 - MGP_LPJ_P0079657 Klrg1 protein_coding protein_coding MGP_LPJ_T0101574.1 MGP_LPJ_G0039666.1 mouse_genomes_project 6 86285762 86289472 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101575.1 MGP_LPJ_G0039666.1 mouse_genomes_project 6 86288964 86289928 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0101576.1 MGP_LPJ_G0039666.1 mouse_genomes_project 6 86289167 86290183 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0080638.1 MGP_LPJ_G0031372.1 mouse_genomes_project 6 147502169 147508979 - MGP_LPJ_P0080638 Kcnj8 protein_coding protein_coding MGP_LPJ_T0080639.1 MGP_LPJ_G0031372.1 mouse_genomes_project 6 147502171 147508735 - MGP_LPJ_P0080639 Kcnj8 protein_coding protein_coding MGP_LPJ_T0015293.1 MGP_LPJ_G0013384.1 mouse_genomes_project 6 48047573 48048174 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002105.1 MGP_LPJ_G0002015.1 mouse_genomes_project 6 92021955 92022468 + TEC TEC MGP_LPJ_T0015537.1 MGP_LPJ_G0013628.1 mouse_genomes_project 6 125652505 125652799 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015197.1 MGP_LPJ_G0013288.1 mouse_genomes_project 6 7161651 7162714 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015336.1 MGP_LPJ_G0013427.1 mouse_genomes_project 6 64840998 64841887 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015364.1 MGP_LPJ_G0013455.1 mouse_genomes_project 6 67362392 67362813 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010840.1 MGP_LPJ_G0008958.1 mouse_genomes_project 6 141386864 141387005 - Gm44364 miRNA miRNA MGP_LPJ_T0080140.1 MGP_LPJ_G0031224.1 mouse_genomes_project 6 132127057 132135994 + MGP_LPJ_P0080140 protein_coding protein_coding MGP_LPJ_T0080141.1 MGP_LPJ_G0031224.1 mouse_genomes_project 6 132127069 132135887 + MGP_LPJ_P0080141 protein_coding nonsense_mediated_decay MGP_LPJ_T0080142.1 MGP_LPJ_G0031224.1 mouse_genomes_project 6 132127557 132136712 + MGP_LPJ_P0080142 protein_coding protein_coding MGP_LPJ_T0080143.1 MGP_LPJ_G0031224.1 mouse_genomes_project 6 132127757 132136712 + MGP_LPJ_P0080143 protein_coding protein_coding MGP_LPJ_T0080144.1 MGP_LPJ_G0031224.1 mouse_genomes_project 6 132127835 132136712 + protein_coding retained_intron MGP_LPJ_T0080145.1 MGP_LPJ_G0031224.1 mouse_genomes_project 6 132128080 132144576 + MGP_LPJ_P0080145 protein_coding non_stop_decay MGP_LPJ_T0001980.1 MGP_LPJ_G0001890.1 mouse_genomes_project 6 37509599 37510816 - TEC TEC MGP_LPJ_T0079342.1 MGP_LPJ_G0031065.1 mouse_genomes_project 6 119012007 119090837 + MGP_LPJ_P0079342 protein_coding protein_coding MGP_LPJ_T0079343.1 MGP_LPJ_G0031065.1 mouse_genomes_project 6 119012012 119090840 + MGP_LPJ_P0079343 protein_coding protein_coding MGP_LPJ_T0079344.1 MGP_LPJ_G0031065.1 mouse_genomes_project 6 119012016 119090837 + MGP_LPJ_P0079344 protein_coding protein_coding MGP_LPJ_T0079345.1 MGP_LPJ_G0031065.1 mouse_genomes_project 6 119012027 119087049 + MGP_LPJ_P0079345 protein_coding protein_coding MGP_LPJ_T0079346.1 MGP_LPJ_G0031065.1 mouse_genomes_project 6 119012036 119087037 + MGP_LPJ_P0079346 protein_coding protein_coding MGP_LPJ_T0079347.1 MGP_LPJ_G0031065.1 mouse_genomes_project 6 119012047 119052121 + MGP_LPJ_P0079347 protein_coding protein_coding MGP_LPJ_T0079348.1 MGP_LPJ_G0031065.1 mouse_genomes_project 6 119024702 119027761 + protein_coding retained_intron MGP_LPJ_T0079349.1 MGP_LPJ_G0031065.1 mouse_genomes_project 6 119025187 119083878 + MGP_LPJ_P0079349 protein_coding protein_coding MGP_LPJ_T0079350.1 MGP_LPJ_G0031065.1 mouse_genomes_project 6 119025228 119052182 + MGP_LPJ_P0079350 protein_coding protein_coding MGP_LPJ_T0079351.1 MGP_LPJ_G0031065.1 mouse_genomes_project 6 119052011 119081881 + protein_coding retained_intron MGP_LPJ_T0079352.1 MGP_LPJ_G0031065.1 mouse_genomes_project 6 119061513 119087520 + MGP_LPJ_P0079352 protein_coding protein_coding MGP_LPJ_T0079353.1 MGP_LPJ_G0031065.1 mouse_genomes_project 6 119061539 119087430 + protein_coding retained_intron MGP_LPJ_T0079354.1 MGP_LPJ_G0031065.1 mouse_genomes_project 6 119068337 119082307 + protein_coding processed_transcript MGP_LPJ_T0079355.1 MGP_LPJ_G0031065.1 mouse_genomes_project 6 119083441 119087078 + protein_coding processed_transcript MGP_LPJ_T0079356.1 MGP_LPJ_G0031065.1 mouse_genomes_project 6 119086472 119087601 + protein_coding processed_transcript MGP_LPJ_T0002178.1 MGP_LPJ_G0002087.1 mouse_genomes_project 6 133411147 133414000 + TEC TEC MGP_LPJ_T0100884.1 MGP_LPJ_G0039147.1 mouse_genomes_project 6 45206244 45206376 - Gm25161 snoRNA snoRNA MGP_LPJ_T0000353.1 MGP_LPJ_G0000291.1 mouse_genomes_project 6 70068333 70068900 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0015300.1 MGP_LPJ_G0013391.1 mouse_genomes_project 6 49677627 49677999 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000357.1 MGP_LPJ_G0000295.1 mouse_genomes_project 6 70313048 70313604 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0008698.1 MGP_LPJ_G0007030.1 mouse_genomes_project 6 100481263 100497329 - Gm44197 lincRNA lincRNA MGP_LPJ_T0015526.1 MGP_LPJ_G0013617.1 mouse_genomes_project 6 124475698 124476023 + processed_pseudogene processed_pseudogene MGP_LPJ_T0080225.1 MGP_LPJ_G0031249.1 mouse_genomes_project 6 133401139 133407812 + MGP_LPJ_P0080225 Tmem52b protein_coding protein_coding MGP_LPJ_T0080226.1 MGP_LPJ_G0031249.1 mouse_genomes_project 6 133401197 133406044 + MGP_LPJ_P0080226 Tmem52b protein_coding protein_coding MGP_LPJ_T0080227.1 MGP_LPJ_G0031249.1 mouse_genomes_project 6 133404391 133406075 + Tmem52b protein_coding retained_intron MGP_LPJ_T0080228.1 MGP_LPJ_G0031249.1 mouse_genomes_project 6 133405141 133406125 + Tmem52b protein_coding retained_intron MGP_LPJ_T0008606.1 MGP_LPJ_G0006957.1 mouse_genomes_project 6 50423591 50428036 - Gm44447 lincRNA lincRNA MGP_LPJ_T0015357.1 MGP_LPJ_G0013448.1 mouse_genomes_project 6 66584116 66584573 + processed_pseudogene processed_pseudogene MGP_LPJ_T0076928.1 MGP_LPJ_G0030521.1 mouse_genomes_project 6 39095392 39251324 + MGP_LPJ_P0076928 Mgam protein_coding protein_coding MGP_LPJ_T0076929.1 MGP_LPJ_G0030521.1 mouse_genomes_project 6 39095392 39251324 + MGP_LPJ_P0076929 Mgam protein_coding protein_coding MGP_LPJ_T0076930.1 MGP_LPJ_G0030521.1 mouse_genomes_project 6 39095392 39131812 + MGP_LPJ_P0076930 Mgam protein_coding protein_coding MGP_LPJ_T0076931.1 MGP_LPJ_G0030521.1 mouse_genomes_project 6 39114125 39250485 + MGP_LPJ_P0076931 Mgam protein_coding unknown_likely_coding MGP_LPJ_T0076932.1 MGP_LPJ_G0030521.1 mouse_genomes_project 6 39140820 39245610 + MGP_LPJ_P0076932 Mgam protein_coding protein_coding MGP_LPJ_T0076933.1 MGP_LPJ_G0030521.1 mouse_genomes_project 6 39165732 39250656 + MGP_LPJ_P0076933 Mgam protein_coding protein_coding MGP_LPJ_T0076934.1 MGP_LPJ_G0030521.1 mouse_genomes_project 6 39229956 39251315 + Mgam protein_coding processed_transcript MGP_LPJ_T0076935.1 MGP_LPJ_G0030521.1 mouse_genomes_project 6 39230816 39232025 + Mgam protein_coding processed_transcript MGP_LPJ_T0015289.1 MGP_LPJ_G0013380.1 mouse_genomes_project 6 47944513 47945603 + processed_pseudogene processed_pseudogene MGP_LPJ_T0076506.1 MGP_LPJ_G0030438.1 mouse_genomes_project 6 28032431 28083703 + MGP_LPJ_P0076506 Nrf1 protein_coding protein_coding MGP_LPJ_T0076507.1 MGP_LPJ_G0030438.1 mouse_genomes_project 6 28032469 28084036 + Nrf1 protein_coding retained_intron MGP_LPJ_T0076508.1 MGP_LPJ_G0030438.1 mouse_genomes_project 6 28032471 28131783 + MGP_LPJ_P0076508 Nrf1 protein_coding protein_coding MGP_LPJ_T0076509.1 MGP_LPJ_G0030438.1 mouse_genomes_project 6 28032482 28080480 + MGP_LPJ_P0076509 Nrf1 protein_coding protein_coding MGP_LPJ_T0076510.1 MGP_LPJ_G0030438.1 mouse_genomes_project 6 28032485 28140252 + MGP_LPJ_P0076510 Nrf1 protein_coding protein_coding MGP_LPJ_T0076511.1 MGP_LPJ_G0030438.1 mouse_genomes_project 6 28032512 28132120 + MGP_LPJ_P0076511 Nrf1 protein_coding protein_coding MGP_LPJ_T0076512.1 MGP_LPJ_G0030438.1 mouse_genomes_project 6 28032512 28117068 + MGP_LPJ_P0076512 Nrf1 protein_coding protein_coding MGP_LPJ_T0076513.1 MGP_LPJ_G0030438.1 mouse_genomes_project 6 28032591 28075215 + MGP_LPJ_P0076513 Nrf1 protein_coding protein_coding MGP_LPJ_T0076514.1 MGP_LPJ_G0030438.1 mouse_genomes_project 6 28062065 28116730 + MGP_LPJ_P0076514 Nrf1 protein_coding protein_coding MGP_LPJ_T0076515.1 MGP_LPJ_G0030438.1 mouse_genomes_project 6 28073782 28140861 + MGP_LPJ_P0076515 Nrf1 protein_coding unknown_likely_coding MGP_LPJ_T0076516.1 MGP_LPJ_G0030438.1 mouse_genomes_project 6 28075065 28131778 + MGP_LPJ_P0076516 Nrf1 protein_coding protein_coding MGP_LPJ_T0076517.1 MGP_LPJ_G0030438.1 mouse_genomes_project 6 28075071 28131778 + MGP_LPJ_P0076517 Nrf1 protein_coding protein_coding MGP_LPJ_T0076518.1 MGP_LPJ_G0030438.1 mouse_genomes_project 6 28075071 28116374 + MGP_LPJ_P0076518 Nrf1 protein_coding protein_coding MGP_LPJ_T0076519.1 MGP_LPJ_G0030438.1 mouse_genomes_project 6 28075071 28116374 + MGP_LPJ_P0076519 Nrf1 protein_coding protein_coding MGP_LPJ_T0076520.1 MGP_LPJ_G0030438.1 mouse_genomes_project 6 28075110 28076175 + Nrf1 protein_coding retained_intron MGP_LPJ_T0076521.1 MGP_LPJ_G0030438.1 mouse_genomes_project 6 28082910 28101358 + Nrf1 protein_coding processed_transcript MGP_LPJ_T0076522.1 MGP_LPJ_G0030438.1 mouse_genomes_project 6 28101346 28127827 + MGP_LPJ_P0076522 Nrf1 protein_coding protein_coding MGP_LPJ_T0008624.1 MGP_LPJ_G0006970.1 mouse_genomes_project 6 54734599 54750865 + 6430584L05Rik lincRNA lincRNA MGP_LPJ_T0005104.1 MGP_LPJ_G0004355.1 mouse_genomes_project 6 128209109 128216667 + Gm20531 antisense antisense MGP_LPJ_T0015578.1 MGP_LPJ_G0013669.1 mouse_genomes_project 6 134653190 134655206 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015206.1 MGP_LPJ_G0013297.1 mouse_genomes_project 6 10963998 10964292 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005032.1 MGP_LPJ_G0004308.1 mouse_genomes_project 6 87797984 87808479 - A430078I02Rik antisense antisense MGP_LPJ_T0005033.1 MGP_LPJ_G0004308.1 mouse_genomes_project 6 87798519 87808539 - A430078I02Rik antisense antisense MGP_LPJ_T0078999.1 MGP_LPJ_G0031008.1 mouse_genomes_project 6 115125405 115211467 - MGP_LPJ_P0078999 Rad18 protein_coding protein_coding MGP_LPJ_T0079000.1 MGP_LPJ_G0031008.1 mouse_genomes_project 6 115125500 115211385 - MGP_LPJ_P0079000 Rad18 protein_coding protein_coding MGP_LPJ_T0079001.1 MGP_LPJ_G0031008.1 mouse_genomes_project 6 115125528 115211392 - MGP_LPJ_P0079001 Rad18 protein_coding protein_coding MGP_LPJ_T0079002.1 MGP_LPJ_G0031008.1 mouse_genomes_project 6 115125530 115211451 - MGP_LPJ_P0079002 Rad18 protein_coding protein_coding MGP_LPJ_T0079003.1 MGP_LPJ_G0031008.1 mouse_genomes_project 6 115126386 115184269 - MGP_LPJ_P0079003 Rad18 protein_coding protein_coding MGP_LPJ_T0079004.1 MGP_LPJ_G0031008.1 mouse_genomes_project 6 115131970 115211429 - Rad18 protein_coding processed_transcript MGP_LPJ_T0079005.1 MGP_LPJ_G0031008.1 mouse_genomes_project 6 115152474 115211414 - MGP_LPJ_P0079005 Rad18 protein_coding nonsense_mediated_decay MGP_LPJ_T0079006.1 MGP_LPJ_G0031008.1 mouse_genomes_project 6 115172277 115211425 - Rad18 protein_coding retained_intron MGP_LPJ_T0015310.1 MGP_LPJ_G0013401.1 mouse_genomes_project 6 53055895 53056652 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008658.1 MGP_LPJ_G0007001.1 mouse_genomes_project 6 83637278 83637878 + Gm44019 lincRNA lincRNA MGP_LPJ_T0018207.1 MGP_LPJ_G0015547.1 mouse_genomes_project 6 51464254 51469655 + Hoxa11os processed_transcript antisense MGP_LPJ_T0018208.1 MGP_LPJ_G0015547.1 mouse_genomes_project 6 51465105 51469633 + Hoxa11os processed_transcript antisense MGP_LPJ_T0018209.1 MGP_LPJ_G0015547.1 mouse_genomes_project 6 51465832 51469659 + Hoxa11os processed_transcript antisense MGP_LPJ_T0018210.1 MGP_LPJ_G0015547.1 mouse_genomes_project 6 51465852 51469654 + Hoxa11os processed_transcript antisense MGP_LPJ_T0018211.1 MGP_LPJ_G0015547.1 mouse_genomes_project 6 51466084 51469244 + Hoxa11os processed_transcript retained_intron MGP_LPJ_T0018212.1 MGP_LPJ_G0015547.1 mouse_genomes_project 6 51468285 51469663 + Hoxa11os processed_transcript antisense MGP_LPJ_T0080310.1 MGP_LPJ_G0031297.1 mouse_genomes_project 6 137164984 137165921 - MGP_LPJ_P0080310 Tas2r125 protein_coding protein_coding MGP_LPJ_T0077476.1 MGP_LPJ_G0030673.1 mouse_genomes_project 6 54505359 54509835 - MGP_LPJ_P0077476 Inmt protein_coding protein_coding MGP_LPJ_T0077477.1 MGP_LPJ_G0030673.1 mouse_genomes_project 6 54507549 54509806 - Inmt protein_coding retained_intron MGP_LPJ_T0102257.1 MGP_LPJ_G0040294.1 mouse_genomes_project 6 126788699 126789456 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0102221.1 MGP_LPJ_G0040258.1 mouse_genomes_project 6 41642249 41643209 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008763.1 MGP_LPJ_G0007083.1 mouse_genomes_project 6 139336415 139366505 + Lockd lincRNA lincRNA MGP_LPJ_T0008764.1 MGP_LPJ_G0007083.1 mouse_genomes_project 6 139336421 139361224 + Lockd lincRNA lincRNA MGP_LPJ_T0008765.1 MGP_LPJ_G0007083.1 mouse_genomes_project 6 139336421 139361458 + Lockd lincRNA lincRNA MGP_LPJ_T0008766.1 MGP_LPJ_G0007083.1 mouse_genomes_project 6 139336456 139361456 + Lockd lincRNA lincRNA MGP_LPJ_T0008767.1 MGP_LPJ_G0007083.1 mouse_genomes_project 6 139336478 139361599 + Lockd lincRNA lincRNA MGP_LPJ_T0101392.1 MGP_LPJ_G0039578.1 mouse_genomes_project 6 131904736 131905901 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0078246.1 MGP_LPJ_G0030851.1 mouse_genomes_project 6 86594192 86608836 + MGP_LPJ_P0078246 Smyd5 protein_coding protein_coding MGP_LPJ_T0078247.1 MGP_LPJ_G0030851.1 mouse_genomes_project 6 86594205 86602699 + Smyd5 protein_coding retained_intron MGP_LPJ_T0078248.1 MGP_LPJ_G0030851.1 mouse_genomes_project 6 86594276 86595022 + Smyd5 protein_coding retained_intron MGP_LPJ_T0078249.1 MGP_LPJ_G0030851.1 mouse_genomes_project 6 86601500 86604312 + Smyd5 protein_coding retained_intron MGP_LPJ_T0078250.1 MGP_LPJ_G0030851.1 mouse_genomes_project 6 86603986 86607844 + Smyd5 protein_coding retained_intron MGP_LPJ_T0078251.1 MGP_LPJ_G0030851.1 mouse_genomes_project 6 86604081 86607361 + Smyd5 protein_coding processed_transcript MGP_LPJ_T0078252.1 MGP_LPJ_G0030851.1 mouse_genomes_project 6 86604096 86607598 + Smyd5 protein_coding retained_intron MGP_LPJ_T0078253.1 MGP_LPJ_G0030851.1 mouse_genomes_project 6 86604929 86607833 + Smyd5 protein_coding processed_transcript MGP_LPJ_T0002761.1 MGP_LPJ_G0002633.1 mouse_genomes_project 6 39701764 39702055 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0080464.1 MGP_LPJ_G0031339.1 mouse_genomes_project 6 141694509 141819667 - MGP_LPJ_P0080464 Rerg protein_coding protein_coding MGP_LPJ_T0080465.1 MGP_LPJ_G0031339.1 mouse_genomes_project 6 141694515 141818893 - MGP_LPJ_P0080465 Rerg protein_coding protein_coding MGP_LPJ_T0080466.1 MGP_LPJ_G0031339.1 mouse_genomes_project 6 141695788 141818846 - MGP_LPJ_P0080466 Rerg protein_coding protein_coding MGP_LPJ_T0080467.1 MGP_LPJ_G0031339.1 mouse_genomes_project 6 141696078 141786684 - MGP_LPJ_P0080467 Rerg protein_coding protein_coding MGP_LPJ_T0080468.1 MGP_LPJ_G0031339.1 mouse_genomes_project 6 141765618 141818869 - MGP_LPJ_P0080468 Rerg protein_coding protein_coding MGP_LPJ_T0079934.1 MGP_LPJ_G0031180.1 mouse_genomes_project 6 128526961 128536198 + MGP_LPJ_P0079934 Ing4 protein_coding protein_coding MGP_LPJ_T0079935.1 MGP_LPJ_G0031180.1 mouse_genomes_project 6 128527037 128533375 + Ing4 protein_coding retained_intron MGP_LPJ_T0079936.1 MGP_LPJ_G0031180.1 mouse_genomes_project 6 128527037 128536460 + MGP_LPJ_P0079936 Ing4 protein_coding protein_coding MGP_LPJ_T0079937.1 MGP_LPJ_G0031180.1 mouse_genomes_project 6 128527049 128534768 + Ing4 protein_coding retained_intron MGP_LPJ_T0079938.1 MGP_LPJ_G0031180.1 mouse_genomes_project 6 128527062 128536004 + Ing4 protein_coding retained_intron MGP_LPJ_T0079939.1 MGP_LPJ_G0031180.1 mouse_genomes_project 6 128527062 128536461 + MGP_LPJ_P0079939 Ing4 protein_coding nonsense_mediated_decay MGP_LPJ_T0079940.1 MGP_LPJ_G0031180.1 mouse_genomes_project 6 128531170 128535202 + Ing4 protein_coding retained_intron MGP_LPJ_T0079941.1 MGP_LPJ_G0031180.1 mouse_genomes_project 6 128532711 128536461 + Ing4 protein_coding retained_intron MGP_LPJ_T0079942.1 MGP_LPJ_G0031180.1 mouse_genomes_project 6 128534835 128535814 + Ing4 protein_coding retained_intron MGP_LPJ_T0002095.1 MGP_LPJ_G0002005.1 mouse_genomes_project 6 89637260 89637518 - TEC TEC MGP_LPJ_T0004995.1 MGP_LPJ_G0004284.1 mouse_genomes_project 6 66881628 66882866 - antisense antisense MGP_LPJ_T0099633.1 MGP_LPJ_G0037896.1 mouse_genomes_project 6 3789902 3790064 - Gm22155 snRNA snRNA MGP_LPJ_T0011664.1 MGP_LPJ_G0009782.1 mouse_genomes_project 6 51482694 51482753 + Gm27280 misc_RNA misc_RNA MGP_LPJ_T0076501.1 MGP_LPJ_G0030437.1 mouse_genomes_project 6 27892900 27937825 + MGP_LPJ_P0076501 Strip2 protein_coding protein_coding MGP_LPJ_T0076502.1 MGP_LPJ_G0030437.1 mouse_genomes_project 6 27892901 27922980 + Strip2 protein_coding retained_intron MGP_LPJ_T0076503.1 MGP_LPJ_G0030437.1 mouse_genomes_project 6 27892901 27935922 + Strip2 protein_coding retained_intron MGP_LPJ_T0076504.1 MGP_LPJ_G0030437.1 mouse_genomes_project 6 27892901 27924502 + MGP_LPJ_P0076504 Strip2 protein_coding protein_coding MGP_LPJ_T0076505.1 MGP_LPJ_G0030437.1 mouse_genomes_project 6 27892901 27937831 + MGP_LPJ_P0076505 Strip2 protein_coding protein_coding MGP_LPJ_T0015269.1 MGP_LPJ_G0013360.1 mouse_genomes_project 6 41995428 41997176 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015182.1 MGP_LPJ_G0013273.1 mouse_genomes_project 6 1316533 1319519 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010805.1 MGP_LPJ_G0008923.1 mouse_genomes_project 6 89373060 89373188 - miRNA miRNA MGP_LPJ_T0015215.1 MGP_LPJ_G0013306.1 mouse_genomes_project 6 15533078 15534918 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101591.1 MGP_LPJ_G0039676.1 mouse_genomes_project 6 135205839 135223321 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0101592.1 MGP_LPJ_G0039676.1 mouse_genomes_project 6 135205902 135224283 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0004971.1 MGP_LPJ_G0004267.1 mouse_genomes_project 6 47544929 47553314 - Gm44119 antisense antisense MGP_LPJ_T0002156.1 MGP_LPJ_G0002066.1 mouse_genomes_project 6 119346911 119349638 + TEC TEC MGP_LPJ_T0002596.1 MGP_LPJ_G0002493.1 mouse_genomes_project 6 40060443 40060492 + MGP_LPJ_P0002596 Trbj2-4 TR_J_gene TR_J_gene MGP_LPJ_T0079631.1 MGP_LPJ_G0031114.1 mouse_genomes_project 6 124234724 124272710 + MGP_LPJ_P0079631 Slc6a13 protein_coding protein_coding MGP_LPJ_T0079632.1 MGP_LPJ_G0031114.1 mouse_genomes_project 6 124234786 124268561 + Slc6a13 protein_coding retained_intron MGP_LPJ_T0079633.1 MGP_LPJ_G0031114.1 mouse_genomes_project 6 124234786 124237798 + Slc6a13 protein_coding retained_intron MGP_LPJ_T0079634.1 MGP_LPJ_G0031114.1 mouse_genomes_project 6 124235279 124259314 + MGP_LPJ_P0079634 Slc6a13 protein_coding protein_coding MGP_LPJ_T0000318.1 MGP_LPJ_G0000256.1 mouse_genomes_project 6 68073512 68073978 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0078405.1 MGP_LPJ_G0030881.1 mouse_genomes_project 6 88364056 88384364 + MGP_LPJ_P0078405 Nfu1 protein_coding protein_coding MGP_LPJ_T0078406.1 MGP_LPJ_G0030881.1 mouse_genomes_project 6 88364656 88370625 + Nfu1 protein_coding retained_intron MGP_LPJ_T0078407.1 MGP_LPJ_G0030881.1 mouse_genomes_project 6 88364656 88384357 + MGP_LPJ_P0078407 Nfu1 protein_coding protein_coding MGP_LPJ_T0078408.1 MGP_LPJ_G0030881.1 mouse_genomes_project 6 88364656 88384362 + MGP_LPJ_P0078408 Nfu1 protein_coding protein_coding MGP_LPJ_T0078409.1 MGP_LPJ_G0030881.1 mouse_genomes_project 6 88364700 88367208 + Nfu1 protein_coding retained_intron MGP_LPJ_T0078410.1 MGP_LPJ_G0030881.1 mouse_genomes_project 6 88364709 88368357 + Nfu1 protein_coding retained_intron MGP_LPJ_T0078411.1 MGP_LPJ_G0030881.1 mouse_genomes_project 6 88364709 88378120 + MGP_LPJ_P0078411 Nfu1 protein_coding protein_coding MGP_LPJ_T0078412.1 MGP_LPJ_G0030881.1 mouse_genomes_project 6 88364823 88381457 + Nfu1 protein_coding processed_transcript MGP_LPJ_T0078413.1 MGP_LPJ_G0030881.1 mouse_genomes_project 6 88380917 88384364 + Nfu1 protein_coding retained_intron MGP_LPJ_T0004934.1 MGP_LPJ_G0004235.1 mouse_genomes_project 6 14529322 14717017 - Gm15581 antisense antisense MGP_LPJ_T0008741.1 MGP_LPJ_G0007066.1 mouse_genomes_project 6 127832464 127835108 + Gm44006 lincRNA lincRNA MGP_LPJ_T0015541.1 MGP_LPJ_G0013632.1 mouse_genomes_project 6 126469714 126469808 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002007.1 MGP_LPJ_G0001917.1 mouse_genomes_project 6 45211178 45213653 + TEC TEC MGP_LPJ_T0015403.1 MGP_LPJ_G0013494.1 mouse_genomes_project 6 76770220 76771493 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002139.1 MGP_LPJ_G0002049.1 mouse_genomes_project 6 105765901 105768402 + TEC TEC MGP_LPJ_T0078628.1 MGP_LPJ_G0030930.1 mouse_genomes_project 6 91692308 91693430 - MGP_LPJ_P0078628 Vmn1r53 protein_coding protein_coding MGP_LPJ_T0080508.1 MGP_LPJ_G0031344.1 mouse_genomes_project 6 142688194 142742697 - MGP_LPJ_P0080508 Slc15a5 protein_coding protein_coding MGP_LPJ_T0080509.1 MGP_LPJ_G0031344.1 mouse_genomes_project 6 142688198 142775401 - Slc15a5 protein_coding retained_intron MGP_LPJ_T0080510.1 MGP_LPJ_G0031344.1 mouse_genomes_project 6 142688198 142780162 - MGP_LPJ_P0080510 Slc15a5 protein_coding protein_coding MGP_LPJ_T0080511.1 MGP_LPJ_G0031344.1 mouse_genomes_project 6 142724575 142736006 - MGP_LPJ_P0080511 Slc15a5 protein_coding protein_coding MGP_LPJ_T0080512.1 MGP_LPJ_G0031344.1 mouse_genomes_project 6 142732401 142742767 - MGP_LPJ_P0080512 Slc15a5 protein_coding protein_coding MGP_LPJ_T0080513.1 MGP_LPJ_G0031344.1 mouse_genomes_project 6 142736179 142754983 - Slc15a5 protein_coding retained_intron MGP_LPJ_T0077163.1 MGP_LPJ_G0030599.1 mouse_genomes_project 6 47482929 47499750 + MGP_LPJ_P0077163 Lrrc61 protein_coding protein_coding MGP_LPJ_T0077164.1 MGP_LPJ_G0030599.1 mouse_genomes_project 6 47482932 47497442 + MGP_LPJ_P0077164 Lrrc61 protein_coding protein_coding MGP_LPJ_T0077165.1 MGP_LPJ_G0030599.1 mouse_genomes_project 6 47482932 47497422 + MGP_LPJ_P0077165 Lrrc61 protein_coding protein_coding MGP_LPJ_T0077166.1 MGP_LPJ_G0030599.1 mouse_genomes_project 6 47482938 47499749 + MGP_LPJ_P0077166 Lrrc61 protein_coding protein_coding MGP_LPJ_T0077167.1 MGP_LPJ_G0030599.1 mouse_genomes_project 6 47482944 47497317 + Lrrc61 protein_coding processed_transcript MGP_LPJ_T0077168.1 MGP_LPJ_G0030599.1 mouse_genomes_project 6 47482962 47497625 + MGP_LPJ_P0077168 Lrrc61 protein_coding protein_coding MGP_LPJ_T0000247.1 MGP_LPJ_G0000186.1 mouse_genomes_project 6 70874476 70875027 + MGP_LPJ_P0000247 IG_V_gene IG_V_gene MGP_LPJ_T0080632.1 MGP_LPJ_G0031370.1 mouse_genomes_project 6 147351535 147401961 - MGP_LPJ_P0080632 Gys2 protein_coding protein_coding MGP_LPJ_T0080633.1 MGP_LPJ_G0031370.1 mouse_genomes_project 6 147351539 147352541 - MGP_LPJ_P0080633 Gys2 protein_coding protein_coding MGP_LPJ_T0015257.1 MGP_LPJ_G0013348.1 mouse_genomes_project 6 38268127 38268701 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005092.1 MGP_LPJ_G0004343.1 mouse_genomes_project 6 116583505 116630222 + Gm15083 antisense antisense MGP_LPJ_T0004970.1 MGP_LPJ_G0004266.1 mouse_genomes_project 6 42096655 42102975 + 9430018G01Rik antisense antisense MGP_LPJ_T0008701.1 MGP_LPJ_G0007031.1 mouse_genomes_project 6 101900551 101912997 - Gm43067 lincRNA lincRNA MGP_LPJ_T0076127.1 MGP_LPJ_G0030366.1 mouse_genomes_project 6 10873293 10878789 - MGP_LPJ_P0076127 Gpr85 protein_coding protein_coding MGP_LPJ_T0076128.1 MGP_LPJ_G0030366.1 mouse_genomes_project 6 10873903 10877292 - MGP_LPJ_P0076128 Gpr85 protein_coding protein_coding MGP_LPJ_T0076129.1 MGP_LPJ_G0030366.1 mouse_genomes_project 6 10873912 10876077 - MGP_LPJ_P0076129 Gpr85 protein_coding protein_coding MGP_LPJ_T0076130.1 MGP_LPJ_G0030366.1 mouse_genomes_project 6 10876909 10878342 - Gpr85 protein_coding processed_transcript MGP_LPJ_T0079862.1 MGP_LPJ_G0031169.1 mouse_genomes_project 6 128307122 128310228 + MGP_LPJ_P0079862 Cdca3 protein_coding protein_coding MGP_LPJ_T0079863.1 MGP_LPJ_G0031169.1 mouse_genomes_project 6 128307263 128311265 + MGP_LPJ_P0079863 Cdca3 protein_coding protein_coding MGP_LPJ_T0079864.1 MGP_LPJ_G0031169.1 mouse_genomes_project 6 128307792 128310149 + MGP_LPJ_P0079864 Cdca3 protein_coding protein_coding MGP_LPJ_T0079865.1 MGP_LPJ_G0031169.1 mouse_genomes_project 6 128307810 128311096 + Cdca3 protein_coding retained_intron MGP_LPJ_T0079866.1 MGP_LPJ_G0031169.1 mouse_genomes_project 6 128307938 128309596 + Cdca3 protein_coding retained_intron MGP_LPJ_T0079867.1 MGP_LPJ_G0031169.1 mouse_genomes_project 6 128307950 128310003 + MGP_LPJ_P0079867 Cdca3 protein_coding protein_coding MGP_LPJ_T0077758.1 MGP_LPJ_G0030759.1 mouse_genomes_project 6 71953012 71971323 + Chmp3 protein_coding processed_transcript MGP_LPJ_T0077759.1 MGP_LPJ_G0030759.1 mouse_genomes_project 6 71953089 71989717 + MGP_LPJ_P0077759 Chmp3 protein_coding protein_coding MGP_LPJ_T0077760.1 MGP_LPJ_G0030759.1 mouse_genomes_project 6 71953089 71971342 + MGP_LPJ_P0077760 Chmp3 protein_coding nonsense_mediated_decay MGP_LPJ_T0077761.1 MGP_LPJ_G0030759.1 mouse_genomes_project 6 71953149 71991713 + MGP_LPJ_P0077761 Chmp3 protein_coding protein_coding MGP_LPJ_T0077762.1 MGP_LPJ_G0030759.1 mouse_genomes_project 6 71953513 71986052 + Chmp3 protein_coding processed_transcript MGP_LPJ_T0077763.1 MGP_LPJ_G0030759.1 mouse_genomes_project 6 71989513 71991740 + Chmp3 protein_coding retained_intron MGP_LPJ_T0078648.1 MGP_LPJ_G0030937.1 mouse_genomes_project 6 91971268 91983933 + MGP_LPJ_P0078648 Klf15 protein_coding protein_coding MGP_LPJ_T0078649.1 MGP_LPJ_G0030937.1 mouse_genomes_project 6 91971366 91983933 + MGP_LPJ_P0078649 Klf15 protein_coding protein_coding MGP_LPJ_T0078650.1 MGP_LPJ_G0030937.1 mouse_genomes_project 6 91973996 91983930 + MGP_LPJ_P0078650 Klf15 protein_coding protein_coding MGP_LPJ_T0078651.1 MGP_LPJ_G0030937.1 mouse_genomes_project 6 91975092 91983930 + MGP_LPJ_P0078651 Klf15 protein_coding protein_coding MGP_LPJ_T0078652.1 MGP_LPJ_G0030937.1 mouse_genomes_project 6 91975810 91983915 + MGP_LPJ_P0078652 Klf15 protein_coding protein_coding MGP_LPJ_T0101595.1 MGP_LPJ_G0039678.1 mouse_genomes_project 6 137643575 137647143 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101596.1 MGP_LPJ_G0039678.1 mouse_genomes_project 6 137643608 137645877 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0000222.1 MGP_LPJ_G0000167.1 mouse_genomes_project 6 70247286 70247853 - MGP_LPJ_P0000222 Igkv8-34 IG_V_gene IG_V_gene MGP_LPJ_T0077137.1 MGP_LPJ_G0030595.1 mouse_genomes_project 6 47307776 47331736 + MGP_LPJ_P0077137 Krba1 protein_coding protein_coding MGP_LPJ_T0077138.1 MGP_LPJ_G0030595.1 mouse_genomes_project 6 47307804 47329095 + MGP_LPJ_P0077138 Krba1 protein_coding protein_coding MGP_LPJ_T0077139.1 MGP_LPJ_G0030595.1 mouse_genomes_project 6 47307820 47312875 + Krba1 protein_coding retained_intron MGP_LPJ_T0077140.1 MGP_LPJ_G0030595.1 mouse_genomes_project 6 47307822 47329090 + MGP_LPJ_P0077140 Krba1 protein_coding protein_coding MGP_LPJ_T0077141.1 MGP_LPJ_G0030595.1 mouse_genomes_project 6 47307848 47331736 + MGP_LPJ_P0077141 Krba1 protein_coding protein_coding MGP_LPJ_T0077142.1 MGP_LPJ_G0030595.1 mouse_genomes_project 6 47307888 47315658 + Krba1 protein_coding processed_transcript MGP_LPJ_T0077143.1 MGP_LPJ_G0030595.1 mouse_genomes_project 6 47308056 47329657 + MGP_LPJ_P0077143 Krba1 protein_coding protein_coding MGP_LPJ_T0077144.1 MGP_LPJ_G0030595.1 mouse_genomes_project 6 47316233 47320728 + Krba1 protein_coding processed_transcript MGP_LPJ_T0077145.1 MGP_LPJ_G0030595.1 mouse_genomes_project 6 47321389 47331736 + Krba1 protein_coding retained_intron MGP_LPJ_T0077146.1 MGP_LPJ_G0030595.1 mouse_genomes_project 6 47325526 47331972 + Krba1 protein_coding retained_intron MGP_LPJ_T0076936.1 MGP_LPJ_G0030522.1 mouse_genomes_project 6 39369781 39378507 - MGP_LPJ_P0076936 Moxd2 protein_coding protein_coding MGP_LPJ_T0002026.1 MGP_LPJ_G0001936.1 mouse_genomes_project 6 60488241 60492269 - TEC TEC MGP_LPJ_T0002073.1 MGP_LPJ_G0001983.1 mouse_genomes_project 6 87332463 87334270 + TEC TEC MGP_LPJ_T0078107.1 MGP_LPJ_G0030827.1 mouse_genomes_project 6 84338922 84347236 + Mob1a protein_coding processed_transcript MGP_LPJ_T0078108.1 MGP_LPJ_G0030827.1 mouse_genomes_project 6 84338940 84345342 + MGP_LPJ_P0078108 Mob1a protein_coding nonsense_mediated_decay MGP_LPJ_T0078109.1 MGP_LPJ_G0030827.1 mouse_genomes_project 6 84338984 84356568 + MGP_LPJ_P0078109 Mob1a protein_coding protein_coding MGP_LPJ_T0078110.1 MGP_LPJ_G0030827.1 mouse_genomes_project 6 84339158 84356493 + MGP_LPJ_P0078110 Mob1a protein_coding protein_coding MGP_LPJ_T0077923.1 MGP_LPJ_G0030787.1 mouse_genomes_project 6 73969966 73971061 - MGP_LPJ_P0077923 4931417E11Rik protein_coding protein_coding MGP_LPJ_T0077924.1 MGP_LPJ_G0030787.1 mouse_genomes_project 6 73969974 73971013 - 4931417E11Rik protein_coding processed_transcript MGP_LPJ_T0077925.1 MGP_LPJ_G0030787.1 mouse_genomes_project 6 73970040 73970958 - 4931417E11Rik protein_coding transcribed_processed_pseudogene MGP_LPJ_T0077944.1 MGP_LPJ_G0030792.1 mouse_genomes_project 6 79107742 79110734 - MGP_LPJ_P0077944 Reg3d protein_coding protein_coding MGP_LPJ_T0077945.1 MGP_LPJ_G0030792.1 mouse_genomes_project 6 79107742 79110734 - MGP_LPJ_P0077945 Reg3d protein_coding protein_coding MGP_LPJ_T0077946.1 MGP_LPJ_G0030792.1 mouse_genomes_project 6 79107792 79110382 - MGP_LPJ_P0077946 Reg3d protein_coding protein_coding MGP_LPJ_T0010776.1 MGP_LPJ_G0008894.1 mouse_genomes_project 6 28158229 28158299 - Mir183 miRNA miRNA MGP_LPJ_T0001990.1 MGP_LPJ_G0001900.1 mouse_genomes_project 6 43895334 43897876 + TEC TEC MGP_LPJ_T0015584.1 MGP_LPJ_G0013675.1 mouse_genomes_project 6 136131582 136131792 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102275.1 MGP_LPJ_G0040312.1 mouse_genomes_project 6 137149787 137150720 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0077582.1 MGP_LPJ_G0030717.1 mouse_genomes_project 6 57824100 57825123 + MGP_LPJ_P0077582 Vmn1r29 protein_coding protein_coding MGP_LPJ_T0015237.1 MGP_LPJ_G0013328.1 mouse_genomes_project 6 27709595 27709960 + processed_pseudogene processed_pseudogene MGP_LPJ_T0078987.1 MGP_LPJ_G0031003.1 mouse_genomes_project 6 113092654 114058632 + MGP_LPJ_P0078987 Grm7 protein_coding protein_coding MGP_LPJ_T0078988.1 MGP_LPJ_G0031003.1 mouse_genomes_project 6 113092654 113985137 + MGP_LPJ_P0078988 Grm7 protein_coding nonsense_mediated_decay MGP_LPJ_T0078989.1 MGP_LPJ_G0031003.1 mouse_genomes_project 6 113092655 114059795 + MGP_LPJ_P0078989 Grm7 protein_coding protein_coding MGP_LPJ_T0078990.1 MGP_LPJ_G0031003.1 mouse_genomes_project 6 113983762 113993606 + MGP_LPJ_P0078990 Grm7 protein_coding protein_coding MGP_LPJ_T0078991.1 MGP_LPJ_G0031003.1 mouse_genomes_project 6 113983791 113995957 + MGP_LPJ_P0078991 Grm7 protein_coding protein_coding MGP_LPJ_T0015337.1 MGP_LPJ_G0013428.1 mouse_genomes_project 6 64855183 64855745 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102243.1 MGP_LPJ_G0040280.1 mouse_genomes_project 6 73931198 73932103 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0078387.1 MGP_LPJ_G0030879.1 mouse_genomes_project 6 88078336 88108567 - MGP_LPJ_P0078387 Anxa4 protein_coding protein_coding MGP_LPJ_T0078388.1 MGP_LPJ_G0030879.1 mouse_genomes_project 6 88078337 88139285 - MGP_LPJ_P0078388 Anxa4 protein_coding protein_coding MGP_LPJ_T0078389.1 MGP_LPJ_G0030879.1 mouse_genomes_project 6 88078343 88108481 - MGP_LPJ_P0078389 Anxa4 protein_coding nonsense_mediated_decay MGP_LPJ_T0078390.1 MGP_LPJ_G0030879.1 mouse_genomes_project 6 88079151 88086618 - Anxa4 protein_coding retained_intron MGP_LPJ_T0078391.1 MGP_LPJ_G0030879.1 mouse_genomes_project 6 88079222 88103364 - MGP_LPJ_P0078391 Anxa4 protein_coding protein_coding MGP_LPJ_T0078392.1 MGP_LPJ_G0030879.1 mouse_genomes_project 6 88083457 88108464 - MGP_LPJ_P0078392 Anxa4 protein_coding protein_coding MGP_LPJ_T0078393.1 MGP_LPJ_G0030879.1 mouse_genomes_project 6 88083464 88139265 - MGP_LPJ_P0078393 Anxa4 protein_coding protein_coding MGP_LPJ_T0078394.1 MGP_LPJ_G0030879.1 mouse_genomes_project 6 88084689 88139265 - MGP_LPJ_P0078394 Anxa4 protein_coding protein_coding MGP_LPJ_T0078395.1 MGP_LPJ_G0030879.1 mouse_genomes_project 6 88090293 88108567 - Anxa4 protein_coding retained_intron MGP_LPJ_T0008778.1 MGP_LPJ_G0007092.1 mouse_genomes_project 6 147953586 147953973 + 4930434O05Rik lincRNA lincRNA MGP_LPJ_T0101577.1 MGP_LPJ_G0039667.1 mouse_genomes_project 6 86944571 86992958 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0101578.1 MGP_LPJ_G0039667.1 mouse_genomes_project 6 86968947 86992958 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0010764.1 MGP_LPJ_G0008882.1 mouse_genomes_project 6 443349 443456 - Mir489 miRNA miRNA MGP_LPJ_T0008779.1 MGP_LPJ_G0007093.1 mouse_genomes_project 6 148085040 148131525 - Gm31108 lincRNA lincRNA MGP_LPJ_T0008650.1 MGP_LPJ_G0006994.1 mouse_genomes_project 6 76614934 76621872 - Gm44113 lincRNA lincRNA MGP_LPJ_T0005052.1 MGP_LPJ_G0004317.1 mouse_genomes_project 6 89939732 89940405 + Gm44170 antisense antisense MGP_LPJ_T0015561.1 MGP_LPJ_G0013652.1 mouse_genomes_project 6 132012415 132012812 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005658.1 MGP_LPJ_G0004764.1 mouse_genomes_project 6 141074672 141079712 - Gm44140 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_LPJ_T0015566.1 MGP_LPJ_G0013657.1 mouse_genomes_project 6 132438676 132438833 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000248.1 MGP_LPJ_G0000187.1 mouse_genomes_project 6 70874777 70875027 + MGP_LPJ_P0000248 IG_V_gene IG_V_gene MGP_LPJ_T0078414.1 MGP_LPJ_G0030882.1 mouse_genomes_project 6 88399566 88450682 + MGP_LPJ_P0078414 Gfpt1 protein_coding protein_coding MGP_LPJ_T0078415.1 MGP_LPJ_G0030882.1 mouse_genomes_project 6 88399566 88414115 + MGP_LPJ_P0078415 Gfpt1 protein_coding protein_coding MGP_LPJ_T0078416.1 MGP_LPJ_G0030882.1 mouse_genomes_project 6 88399570 88412653 + Gfpt1 protein_coding processed_transcript MGP_LPJ_T0078417.1 MGP_LPJ_G0030882.1 mouse_genomes_project 6 88399570 88402379 + Gfpt1 protein_coding retained_intron MGP_LPJ_T0078418.1 MGP_LPJ_G0030882.1 mouse_genomes_project 6 88399570 88414115 + MGP_LPJ_P0078418 Gfpt1 protein_coding protein_coding MGP_LPJ_T0078419.1 MGP_LPJ_G0030882.1 mouse_genomes_project 6 88399611 88446729 + MGP_LPJ_P0078419 Gfpt1 protein_coding protein_coding MGP_LPJ_T0078420.1 MGP_LPJ_G0030882.1 mouse_genomes_project 6 88435272 88444827 + Gfpt1 protein_coding retained_intron MGP_LPJ_T0008649.1 MGP_LPJ_G0006993.1 mouse_genomes_project 6 74087885 74111295 - Gm31747 lincRNA lincRNA MGP_LPJ_T0008559.1 MGP_LPJ_G0006926.1 mouse_genomes_project 6 29693521 29695272 + Gm6117 lincRNA lincRNA MGP_LPJ_T0078815.1 MGP_LPJ_G0030969.1 mouse_genomes_project 6 97988935 97990682 - MGP_LPJ_P0078815 1700123L14Rik protein_coding protein_coding MGP_LPJ_T0076941.1 MGP_LPJ_G0030525.1 mouse_genomes_project 6 39438159 39441655 - MGP_LPJ_P0076941 Gm4744 protein_coding protein_coding MGP_LPJ_T0008802.1 MGP_LPJ_G0007108.1 mouse_genomes_project 6 153876239 153897941 - 4930528G23Rik lincRNA lincRNA MGP_LPJ_T0076877.1 MGP_LPJ_G0030506.1 mouse_genomes_project 6 38015759 38027032 + MGP_LPJ_P0076877 Ndufb2 protein_coding protein_coding MGP_LPJ_T0076878.1 MGP_LPJ_G0030506.1 mouse_genomes_project 6 38015768 38023121 + MGP_LPJ_P0076878 Ndufb2 protein_coding protein_coding MGP_LPJ_T0076879.1 MGP_LPJ_G0030506.1 mouse_genomes_project 6 38015770 38023072 + Ndufb2 protein_coding processed_transcript MGP_LPJ_T0076880.1 MGP_LPJ_G0030506.1 mouse_genomes_project 6 38015773 38020399 + Ndufb2 protein_coding retained_intron MGP_LPJ_T0076881.1 MGP_LPJ_G0030506.1 mouse_genomes_project 6 38020915 38022942 + Ndufb2 protein_coding retained_intron MGP_LPJ_T0076882.1 MGP_LPJ_G0030506.1 mouse_genomes_project 6 38025433 38026960 + Ndufb2 protein_coding processed_transcript MGP_LPJ_T0000180.1 MGP_LPJ_G0000133.1 mouse_genomes_project 6 68604261 68604734 + MGP_LPJ_P0000180 Igkv12-98 IG_V_gene IG_V_gene MGP_LPJ_T0000181.1 MGP_LPJ_G0000133.1 mouse_genomes_project 6 68604261 68604734 + MGP_LPJ_P0000181 Igkv12-98 IG_V_gene IG_V_gene MGP_LPJ_T0076051.1 MGP_LPJ_G0030351.1 mouse_genomes_project 6 4873016 5078365 - MGP_LPJ_P0076051 Col28a1 protein_coding protein_coding MGP_LPJ_T0076052.1 MGP_LPJ_G0030351.1 mouse_genomes_project 6 4873693 5061366 - MGP_LPJ_P0076052 Col28a1 protein_coding unknown_likely_coding MGP_LPJ_T0076053.1 MGP_LPJ_G0030351.1 mouse_genomes_project 6 4896681 4898157 - Col28a1 protein_coding processed_transcript MGP_LPJ_T0076054.1 MGP_LPJ_G0030351.1 mouse_genomes_project 6 4955502 4961110 - Col28a1 protein_coding retained_intron MGP_LPJ_T0079100.1 MGP_LPJ_G0031021.1 mouse_genomes_project 6 115971088 115975069 - MGP_LPJ_P0079100 Rpusd3 protein_coding protein_coding MGP_LPJ_T0079101.1 MGP_LPJ_G0031021.1 mouse_genomes_project 6 115971298 115972203 - Rpusd3 protein_coding retained_intron MGP_LPJ_T0079102.1 MGP_LPJ_G0031021.1 mouse_genomes_project 6 115971856 115975070 - MGP_LPJ_P0079102 Rpusd3 protein_coding protein_coding MGP_LPJ_T0079103.1 MGP_LPJ_G0031021.1 mouse_genomes_project 6 115972060 115975061 - MGP_LPJ_P0079103 Rpusd3 protein_coding protein_coding MGP_LPJ_T0079104.1 MGP_LPJ_G0031021.1 mouse_genomes_project 6 115972539 115975070 - Rpusd3 protein_coding retained_intron MGP_LPJ_T0079105.1 MGP_LPJ_G0031021.1 mouse_genomes_project 6 115972644 115975065 - MGP_LPJ_P0079105 Rpusd3 protein_coding protein_coding MGP_LPJ_T0079106.1 MGP_LPJ_G0031021.1 mouse_genomes_project 6 115972946 115974799 - Rpusd3 protein_coding retained_intron MGP_LPJ_T0079107.1 MGP_LPJ_G0031021.1 mouse_genomes_project 6 115972973 115975082 - MGP_LPJ_P0079107 Rpusd3 protein_coding protein_coding MGP_LPJ_T0079108.1 MGP_LPJ_G0031021.1 mouse_genomes_project 6 115974054 115975074 - Rpusd3 protein_coding retained_intron MGP_LPJ_T0079711.1 MGP_LPJ_G0031131.1 mouse_genomes_project 6 126130084 126159713 + MGP_LPJ_P0079711 Foxj2 protein_coding protein_coding MGP_LPJ_T0079712.1 MGP_LPJ_G0031131.1 mouse_genomes_project 6 126130681 126159688 + MGP_LPJ_P0079712 Foxj2 protein_coding protein_coding MGP_LPJ_T0079713.1 MGP_LPJ_G0031131.1 mouse_genomes_project 6 126138130 126147800 + MGP_LPJ_P0079713 Foxj2 protein_coding protein_coding MGP_LPJ_T0015428.1 MGP_LPJ_G0013519.1 mouse_genomes_project 6 86215281 86215859 + processed_pseudogene processed_pseudogene MGP_LPJ_T0080514.1 MGP_LPJ_G0031345.1 mouse_genomes_project 6 142847684 142864024 + MGP_LPJ_P0080514 Mgst1 protein_coding protein_coding MGP_LPJ_T0080515.1 MGP_LPJ_G0031345.1 mouse_genomes_project 6 142847896 142863874 + MGP_LPJ_P0080515 Mgst1 protein_coding protein_coding MGP_LPJ_T0080516.1 MGP_LPJ_G0031345.1 mouse_genomes_project 6 142847922 142863661 + MGP_LPJ_P0080516 Mgst1 protein_coding protein_coding MGP_LPJ_T0080517.1 MGP_LPJ_G0031345.1 mouse_genomes_project 6 142847939 142864011 + MGP_LPJ_P0080517 Mgst1 protein_coding protein_coding MGP_LPJ_T0080518.1 MGP_LPJ_G0031345.1 mouse_genomes_project 6 142847967 142863653 + MGP_LPJ_P0080518 Mgst1 protein_coding protein_coding MGP_LPJ_T0080519.1 MGP_LPJ_G0031345.1 mouse_genomes_project 6 142848740 142863828 + MGP_LPJ_P0080519 Mgst1 protein_coding protein_coding MGP_LPJ_T0080520.1 MGP_LPJ_G0031345.1 mouse_genomes_project 6 142848956 142863881 + MGP_LPJ_P0080520 Mgst1 protein_coding protein_coding MGP_LPJ_T0080521.1 MGP_LPJ_G0031345.1 mouse_genomes_project 6 142850227 142858022 + MGP_LPJ_P0080521 Mgst1 protein_coding protein_coding MGP_LPJ_T0002217.1 MGP_LPJ_G0002126.1 mouse_genomes_project 6 154539449 154542202 - TEC TEC MGP_LPJ_T0001957.1 MGP_LPJ_G0001867.1 mouse_genomes_project 6 15821929 15823571 - TEC TEC MGP_LPJ_T0002723.1 MGP_LPJ_G0002600.1 mouse_genomes_project 6 39716496 39716985 + MGP_LPJ_P0002723 Trbv26 TR_V_gene TR_V_gene MGP_LPJ_T0002724.1 MGP_LPJ_G0002600.1 mouse_genomes_project 6 39716516 39716985 + MGP_LPJ_P0002724 Trbv26 TR_V_gene TR_V_gene MGP_LPJ_T0015202.1 MGP_LPJ_G0013293.1 mouse_genomes_project 6 9569366 9571068 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000231.1 MGP_LPJ_G0000174.1 mouse_genomes_project 6 70375311 70375788 - MGP_LPJ_P0000231 IG_V_gene IG_V_gene MGP_LPJ_T0000234.1 MGP_LPJ_G0000174.1 mouse_genomes_project 6 70375311 70375773 - MGP_LPJ_P0000234 IG_V_gene IG_V_gene MGP_LPJ_T0077035.1 MGP_LPJ_G0030563.1 mouse_genomes_project 6 41171054 41214543 - MGP_LPJ_P0077035 Tcaf1 protein_coding protein_coding MGP_LPJ_T0077036.1 MGP_LPJ_G0030563.1 mouse_genomes_project 6 41172994 41197543 - MGP_LPJ_P0077036 Tcaf1 protein_coding protein_coding MGP_LPJ_T0077037.1 MGP_LPJ_G0030563.1 mouse_genomes_project 6 41174081 41197515 - MGP_LPJ_P0077037 Tcaf1 protein_coding protein_coding MGP_LPJ_T0077038.1 MGP_LPJ_G0030563.1 mouse_genomes_project 6 41179560 41197459 - Tcaf1 protein_coding retained_intron MGP_LPJ_T0077039.1 MGP_LPJ_G0030563.1 mouse_genomes_project 6 41181890 41214526 - Tcaf1 protein_coding processed_transcript MGP_LPJ_T0077040.1 MGP_LPJ_G0030563.1 mouse_genomes_project 6 41189694 41214526 - Tcaf1 protein_coding retained_intron MGP_LPJ_T0077041.1 MGP_LPJ_G0030563.1 mouse_genomes_project 6 41194754 41197464 - Tcaf1 protein_coding processed_transcript MGP_LPJ_T0077042.1 MGP_LPJ_G0030563.1 mouse_genomes_project 6 41213551 41214527 - Tcaf1 protein_coding processed_transcript MGP_LPJ_T0001945.1 MGP_LPJ_G0001855.1 mouse_genomes_project 6 3718183 3721147 - TEC TEC MGP_LPJ_T0015278.1 MGP_LPJ_G0013369.1 mouse_genomes_project 6 46385289 46385479 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002760.1 MGP_LPJ_G0002632.1 mouse_genomes_project 6 39666825 39667119 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0076114.1 MGP_LPJ_G0030363.1 mouse_genomes_project 6 10191394 10278208 - MGP_LPJ_P0076114 protein_coding protein_coding MGP_LPJ_T0076115.1 MGP_LPJ_G0030363.1 mouse_genomes_project 6 10210646 10216430 - protein_coding retained_intron MGP_LPJ_T0076116.1 MGP_LPJ_G0030363.1 mouse_genomes_project 6 10227693 10278208 - MGP_LPJ_P0076116 protein_coding protein_coding MGP_LPJ_T0076117.1 MGP_LPJ_G0030363.1 mouse_genomes_project 6 10240615 10257505 - protein_coding retained_intron MGP_LPJ_T0100881.1 MGP_LPJ_G0039144.1 mouse_genomes_project 6 37834140 37834271 - Gm25402 snoRNA snoRNA MGP_LPJ_T0010835.1 MGP_LPJ_G0008953.1 mouse_genomes_project 6 131756166 131756276 - Gm26338 miRNA miRNA MGP_LPJ_T0005100.1 MGP_LPJ_G0004351.1 mouse_genomes_project 6 124151347 124153553 - Gm15856 antisense antisense MGP_LPJ_T0077927.1 MGP_LPJ_G0030789.1 mouse_genomes_project 6 77560822 78717148 - MGP_LPJ_P0077927 Ctnna2 protein_coding protein_coding MGP_LPJ_T0077928.1 MGP_LPJ_G0030789.1 mouse_genomes_project 6 77560822 78717148 - MGP_LPJ_P0077928 Ctnna2 protein_coding protein_coding MGP_LPJ_T0077929.1 MGP_LPJ_G0030789.1 mouse_genomes_project 6 77560825 78716999 - MGP_LPJ_P0077929 Ctnna2 protein_coding protein_coding MGP_LPJ_T0077930.1 MGP_LPJ_G0030789.1 mouse_genomes_project 6 77561735 78717009 - MGP_LPJ_P0077930 Ctnna2 protein_coding protein_coding MGP_LPJ_T0077931.1 MGP_LPJ_G0030789.1 mouse_genomes_project 6 77561941 77586158 - Ctnna2 protein_coding retained_intron MGP_LPJ_T0077932.1 MGP_LPJ_G0030789.1 mouse_genomes_project 6 77598438 77841192 - MGP_LPJ_P0077932 Ctnna2 protein_coding nonsense_mediated_decay MGP_LPJ_T0077937.1 MGP_LPJ_G0030789.1 mouse_genomes_project 6 78326353 78717009 - MGP_LPJ_P0077937 Ctnna2 protein_coding protein_coding MGP_LPJ_T0077938.1 MGP_LPJ_G0030789.1 mouse_genomes_project 6 78331997 78643489 - MGP_LPJ_P0077938 Ctnna2 protein_coding unknown_likely_coding MGP_LPJ_T0077939.1 MGP_LPJ_G0030789.1 mouse_genomes_project 6 78657970 78717034 - Ctnna2 protein_coding processed_transcript MGP_LPJ_T0076883.1 MGP_LPJ_G0030507.1 mouse_genomes_project 6 38026886 38153463 - MGP_LPJ_P0076883 Braf protein_coding protein_coding MGP_LPJ_T0076884.1 MGP_LPJ_G0030507.1 mouse_genomes_project 6 38037708 38153193 - MGP_LPJ_P0076884 Braf protein_coding protein_coding MGP_LPJ_T0076885.1 MGP_LPJ_G0030507.1 mouse_genomes_project 6 38062615 38068110 - Braf protein_coding retained_intron MGP_LPJ_T0076886.1 MGP_LPJ_G0030507.1 mouse_genomes_project 6 38063630 38066578 - Braf protein_coding retained_intron MGP_LPJ_T0076887.1 MGP_LPJ_G0030507.1 mouse_genomes_project 6 38074930 38089000 - Braf protein_coding retained_intron MGP_LPJ_T0015435.1 MGP_LPJ_G0013526.1 mouse_genomes_project 6 87222407 87223184 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002125.1 MGP_LPJ_G0002035.1 mouse_genomes_project 6 102182989 102183381 - TEC TEC MGP_LPJ_T0011680.1 MGP_LPJ_G0009798.1 mouse_genomes_project 6 114489678 114489993 + Gm25454 misc_RNA misc_RNA MGP_LPJ_T0002078.1 MGP_LPJ_G0001988.1 mouse_genomes_project 6 88000377 88002734 - TEC TEC MGP_LPJ_T0001952.1 MGP_LPJ_G0001862.1 mouse_genomes_project 6 13077616 13079307 + TEC TEC MGP_LPJ_T0002713.1 MGP_LPJ_G0002592.1 mouse_genomes_project 6 39626658 39627130 + MGP_LPJ_P0002713 Trbv14 TR_V_gene TR_V_gene MGP_LPJ_T0015245.1 MGP_LPJ_G0013336.1 mouse_genomes_project 6 33036259 33036955 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018220.1 MGP_LPJ_G0015550.1 mouse_genomes_project 6 53559900 53730015 - 9130019P16Rik processed_transcript antisense MGP_LPJ_T0018221.1 MGP_LPJ_G0015550.1 mouse_genomes_project 6 53594697 53620348 - 9130019P16Rik processed_transcript lincRNA MGP_LPJ_T0018222.1 MGP_LPJ_G0015550.1 mouse_genomes_project 6 53722800 53729349 - 9130019P16Rik processed_transcript lincRNA MGP_LPJ_T0002014.1 MGP_LPJ_G0001924.1 mouse_genomes_project 6 51793149 51795832 + TEC TEC MGP_LPJ_T0078054.1 MGP_LPJ_G0030819.1 mouse_genomes_project 6 84118553 84121070 - MGP_LPJ_P0078054 Wbp1 protein_coding protein_coding MGP_LPJ_T0078055.1 MGP_LPJ_G0030819.1 mouse_genomes_project 6 84118553 84121070 - MGP_LPJ_P0078055 Wbp1 protein_coding protein_coding MGP_LPJ_T0078056.1 MGP_LPJ_G0030819.1 mouse_genomes_project 6 84118554 84121070 - Wbp1 protein_coding retained_intron MGP_LPJ_T0078057.1 MGP_LPJ_G0030819.1 mouse_genomes_project 6 84118816 84120898 - MGP_LPJ_P0078057 Wbp1 protein_coding protein_coding MGP_LPJ_T0078058.1 MGP_LPJ_G0030819.1 mouse_genomes_project 6 84118945 84120917 - MGP_LPJ_P0078058 Wbp1 protein_coding protein_coding MGP_LPJ_T0078059.1 MGP_LPJ_G0030819.1 mouse_genomes_project 6 84119059 84119718 - MGP_LPJ_P0078059 Wbp1 protein_coding protein_coding MGP_LPJ_T0078060.1 MGP_LPJ_G0030819.1 mouse_genomes_project 6 84119144 84120389 - Wbp1 protein_coding retained_intron MGP_LPJ_T0078061.1 MGP_LPJ_G0030819.1 mouse_genomes_project 6 84119149 84120770 - Wbp1 protein_coding processed_transcript MGP_LPJ_T0078062.1 MGP_LPJ_G0030819.1 mouse_genomes_project 6 84120068 84120785 - MGP_LPJ_P0078062 Wbp1 protein_coding protein_coding MGP_LPJ_T0015275.1 MGP_LPJ_G0013366.1 mouse_genomes_project 6 45342801 45343792 - processed_pseudogene processed_pseudogene MGP_LPJ_T0078859.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 100886594 101243460 - MGP_LPJ_P0078859 Foxp1 protein_coding protein_coding MGP_LPJ_T0078860.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 100886598 101422754 - MGP_LPJ_P0078860 Foxp1 protein_coding protein_coding MGP_LPJ_T0078861.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 100886608 101134673 - MGP_LPJ_P0078861 Foxp1 protein_coding protein_coding MGP_LPJ_T0078862.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 100886671 100891042 - Foxp1 protein_coding processed_transcript MGP_LPJ_T0078863.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 100890445 101512382 - MGP_LPJ_P0078863 Foxp1 protein_coding protein_coding MGP_LPJ_T0078864.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 100891346 101134673 - MGP_LPJ_P0078864 Foxp1 protein_coding protein_coding MGP_LPJ_T0078865.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 100891346 101134673 - MGP_LPJ_P0078865 Foxp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078866.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 100891346 100992761 - MGP_LPJ_P0078866 Foxp1 protein_coding protein_coding MGP_LPJ_T0078867.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 100891346 101134673 - MGP_LPJ_P0078867 Foxp1 protein_coding protein_coding MGP_LPJ_T0078868.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 100891346 101134673 - MGP_LPJ_P0078868 Foxp1 protein_coding protein_coding MGP_LPJ_T0078869.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 100891346 101134673 - MGP_LPJ_P0078869 Foxp1 protein_coding protein_coding MGP_LPJ_T0078870.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 100891346 101422754 - MGP_LPJ_P0078870 Foxp1 protein_coding protein_coding MGP_LPJ_T0078871.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 100891346 101134673 - MGP_LPJ_P0078871 Foxp1 protein_coding protein_coding MGP_LPJ_T0078872.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 100891346 101422754 - MGP_LPJ_P0078872 Foxp1 protein_coding protein_coding MGP_LPJ_T0078873.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 100891427 100896802 - Foxp1 protein_coding retained_intron MGP_LPJ_T0078874.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 100906790 100992815 - MGP_LPJ_P0078874 Foxp1 protein_coding protein_coding MGP_LPJ_T0078875.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 100913457 100967697 - Foxp1 protein_coding retained_intron MGP_LPJ_T0078876.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 100967216 100993444 - MGP_LPJ_P0078876 Foxp1 protein_coding protein_coding MGP_LPJ_T0078877.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 100967409 101010935 - MGP_LPJ_P0078877 Foxp1 protein_coding protein_coding MGP_LPJ_T0078878.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 100970701 100992768 - Foxp1 protein_coding processed_transcript MGP_LPJ_T0078879.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 100973949 101064824 - MGP_LPJ_P0078879 Foxp1 protein_coding protein_coding MGP_LPJ_T0078880.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 100973960 101010918 - MGP_LPJ_P0078880 Foxp1 protein_coding protein_coding MGP_LPJ_T0078881.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 100981084 100992493 - MGP_LPJ_P0078881 Foxp1 protein_coding protein_coding MGP_LPJ_T0078882.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 101043627 101223996 - MGP_LPJ_P0078882 Foxp1 protein_coding protein_coding MGP_LPJ_T0078883.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 101123538 101243460 - Foxp1 protein_coding processed_transcript MGP_LPJ_T0078884.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 101133594 101243477 - Foxp1 protein_coding retained_intron MGP_LPJ_T0078885.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 101133594 101243477 - Foxp1 protein_coding retained_intron MGP_LPJ_T0078886.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 101134583 101512547 - MGP_LPJ_P0078886 Foxp1 protein_coding protein_coding MGP_LPJ_T0078888.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 101237301 101514038 - Foxp1 protein_coding processed_transcript MGP_LPJ_T0078889.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 101286720 101424345 - Foxp1 protein_coding processed_transcript MGP_LPJ_T0078892.1 MGP_LPJ_G0030979.1 mouse_genomes_project 6 101422644 101514112 - Foxp1 protein_coding processed_transcript MGP_LPJ_T0010820.1 MGP_LPJ_G0008938.1 mouse_genomes_project 6 118431592 118431655 + Mir7660 miRNA miRNA MGP_LPJ_T0002192.1 MGP_LPJ_G0002101.1 mouse_genomes_project 6 142263812 142265399 - TEC TEC MGP_LPJ_T0102211.1 MGP_LPJ_G0040248.1 mouse_genomes_project 6 36898116 36902152 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0076974.1 MGP_LPJ_G0030542.1 mouse_genomes_project 6 40443265 40447734 + MGP_LPJ_P0076974 Sval1 protein_coding protein_coding MGP_LPJ_T0000342.1 MGP_LPJ_G0000280.1 mouse_genomes_project 6 69244875 69245346 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0101582.1 MGP_LPJ_G0039670.1 mouse_genomes_project 6 127427006 127447432 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0015630.1 MGP_LPJ_G0013721.1 mouse_genomes_project 6 154261726 154262138 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002080.1 MGP_LPJ_G0001990.1 mouse_genomes_project 6 88225383 88227074 + TEC TEC MGP_LPJ_T0005151.1 MGP_LPJ_G0004395.1 mouse_genomes_project 6 151087685 151093553 - Sspnos antisense antisense MGP_LPJ_T0080342.1 MGP_LPJ_G0031311.1 mouse_genomes_project 6 139024887 139099866 + MGP_LPJ_P0080342 Borcs5 protein_coding protein_coding MGP_LPJ_T0080343.1 MGP_LPJ_G0031311.1 mouse_genomes_project 6 139026317 139100698 + MGP_LPJ_P0080343 Borcs5 protein_coding protein_coding MGP_LPJ_T0080344.1 MGP_LPJ_G0031311.1 mouse_genomes_project 6 139026338 139030092 + Borcs5 protein_coding retained_intron MGP_LPJ_T0080345.1 MGP_LPJ_G0031311.1 mouse_genomes_project 6 139026632 139075249 + Borcs5 protein_coding retained_intron MGP_LPJ_T0080346.1 MGP_LPJ_G0031311.1 mouse_genomes_project 6 139090058 139099966 + Borcs5 protein_coding processed_transcript MGP_LPJ_T0002086.1 MGP_LPJ_G0001996.1 mouse_genomes_project 6 88694598 88696704 - TEC TEC MGP_LPJ_T0098662.1 MGP_LPJ_G0036932.1 mouse_genomes_project 6 142097845 142098152 + Gm44258 sense_intronic sense_intronic MGP_LPJ_T0000154.1 MGP_LPJ_G0000114.1 mouse_genomes_project 6 67712164 67712940 + MGP_LPJ_P0000154 Igkv1-135 IG_V_gene IG_V_gene MGP_LPJ_T0015277.1 MGP_LPJ_G0013368.1 mouse_genomes_project 6 45772571 45773708 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002153.1 MGP_LPJ_G0002063.1 mouse_genomes_project 6 118585942 118586782 - TEC TEC MGP_LPJ_T0018244.1 MGP_LPJ_G0015559.1 mouse_genomes_project 6 97048476 97126540 - AY512915 processed_transcript antisense MGP_LPJ_T0018245.1 MGP_LPJ_G0015559.1 mouse_genomes_project 6 97069431 97126527 - AY512915 processed_transcript antisense MGP_LPJ_T0018246.1 MGP_LPJ_G0015559.1 mouse_genomes_project 6 97083311 97126542 - AY512915 processed_transcript lincRNA MGP_LPJ_T0018247.1 MGP_LPJ_G0015559.1 mouse_genomes_project 6 97105780 97126520 - AY512915 processed_transcript antisense MGP_LPJ_T0018248.1 MGP_LPJ_G0015559.1 mouse_genomes_project 6 97119982 97126526 - AY512915 processed_transcript processed_transcript MGP_LPJ_T0076942.1 MGP_LPJ_G0030526.1 mouse_genomes_project 6 39486526 39490042 - MGP_LPJ_P0076942 protein_coding protein_coding MGP_LPJ_T0076301.1 MGP_LPJ_G0030394.1 mouse_genomes_project 6 21337462 21338899 - MGP_LPJ_P0076301 Rnf133 protein_coding protein_coding MGP_LPJ_T0076302.1 MGP_LPJ_G0030394.1 mouse_genomes_project 6 21337467 21338800 - MGP_LPJ_P0076302 Rnf133 protein_coding protein_coding MGP_LPJ_T0080452.1 MGP_LPJ_G0031336.1 mouse_genomes_project 6 141524086 141539627 - MGP_LPJ_P0080452 Erp27 protein_coding protein_coding MGP_LPJ_T0080453.1 MGP_LPJ_G0031336.1 mouse_genomes_project 6 141526551 141539627 - Erp27 protein_coding retained_intron MGP_LPJ_T0080454.1 MGP_LPJ_G0031336.1 mouse_genomes_project 6 141537112 141539587 - Erp27 protein_coding retained_intron MGP_LPJ_T0076198.1 MGP_LPJ_G0030377.1 mouse_genomes_project 6 15038049 15183320 + St7 protein_coding retained_intron MGP_LPJ_T0076199.1 MGP_LPJ_G0030377.1 mouse_genomes_project 6 15039088 15318955 + MGP_LPJ_P0076199 St7 protein_coding protein_coding MGP_LPJ_T0076200.1 MGP_LPJ_G0030377.1 mouse_genomes_project 6 15039135 15318955 + MGP_LPJ_P0076200 St7 protein_coding protein_coding MGP_LPJ_T0076201.1 MGP_LPJ_G0030377.1 mouse_genomes_project 6 15039173 15318898 + MGP_LPJ_P0076201 St7 protein_coding protein_coding MGP_LPJ_T0076202.1 MGP_LPJ_G0030377.1 mouse_genomes_project 6 15039173 15318898 + MGP_LPJ_P0076202 St7 protein_coding nonsense_mediated_decay MGP_LPJ_T0076203.1 MGP_LPJ_G0030377.1 mouse_genomes_project 6 15039173 15318958 + MGP_LPJ_P0076203 St7 protein_coding nonsense_mediated_decay MGP_LPJ_T0076204.1 MGP_LPJ_G0030377.1 mouse_genomes_project 6 15039173 15220864 + MGP_LPJ_P0076204 St7 protein_coding nonsense_mediated_decay MGP_LPJ_T0076205.1 MGP_LPJ_G0030377.1 mouse_genomes_project 6 15039173 15318898 + MGP_LPJ_P0076205 St7 protein_coding protein_coding MGP_LPJ_T0076206.1 MGP_LPJ_G0030377.1 mouse_genomes_project 6 15039311 15318898 + MGP_LPJ_P0076206 St7 protein_coding protein_coding MGP_LPJ_T0076207.1 MGP_LPJ_G0030377.1 mouse_genomes_project 6 15100803 15318898 + MGP_LPJ_P0076207 St7 protein_coding protein_coding MGP_LPJ_T0076208.1 MGP_LPJ_G0030377.1 mouse_genomes_project 6 15100803 15318898 + MGP_LPJ_P0076208 St7 protein_coding protein_coding MGP_LPJ_T0076209.1 MGP_LPJ_G0030377.1 mouse_genomes_project 6 15107302 15279037 + St7 protein_coding processed_transcript MGP_LPJ_T0076210.1 MGP_LPJ_G0030377.1 mouse_genomes_project 6 15107302 15318958 + MGP_LPJ_P0076210 St7 protein_coding protein_coding MGP_LPJ_T0076211.1 MGP_LPJ_G0030377.1 mouse_genomes_project 6 15107348 15318953 + MGP_LPJ_P0076211 St7 protein_coding protein_coding MGP_LPJ_T0076212.1 MGP_LPJ_G0030377.1 mouse_genomes_project 6 15107428 15200381 + St7 protein_coding retained_intron MGP_LPJ_T0076213.1 MGP_LPJ_G0030377.1 mouse_genomes_project 6 15107465 15318955 + St7 protein_coding retained_intron MGP_LPJ_T0076214.1 MGP_LPJ_G0030377.1 mouse_genomes_project 6 15107528 15318934 + St7 protein_coding retained_intron MGP_LPJ_T0076215.1 MGP_LPJ_G0030377.1 mouse_genomes_project 6 15204194 15212187 + St7 protein_coding processed_transcript MGP_LPJ_T0076216.1 MGP_LPJ_G0030377.1 mouse_genomes_project 6 15204213 15277462 + St7 protein_coding processed_transcript MGP_LPJ_T0076217.1 MGP_LPJ_G0030377.1 mouse_genomes_project 6 15220819 15279023 + St7 protein_coding processed_transcript MGP_LPJ_T0076218.1 MGP_LPJ_G0030377.1 mouse_genomes_project 6 15278115 15318867 + St7 protein_coding processed_transcript MGP_LPJ_T0080118.1 MGP_LPJ_G0031219.1 mouse_genomes_project 6 132043545 132080811 - MGP_LPJ_P0080118 Tulp3 protein_coding protein_coding MGP_LPJ_T0080119.1 MGP_LPJ_G0031219.1 mouse_genomes_project 6 132055047 132080801 - Tulp3 protein_coding retained_intron MGP_LPJ_T0080120.1 MGP_LPJ_G0031219.1 mouse_genomes_project 6 132058154 132080775 - MGP_LPJ_P0080120 Tulp3 protein_coding protein_coding MGP_LPJ_T0080121.1 MGP_LPJ_G0031219.1 mouse_genomes_project 6 132066152 132069575 - Tulp3 protein_coding retained_intron MGP_LPJ_T0080122.1 MGP_LPJ_G0031219.1 mouse_genomes_project 6 132066831 132080785 - MGP_LPJ_P0080122 Tulp3 protein_coding protein_coding MGP_LPJ_T0080795.1 MGP_LPJ_G0031397.1 mouse_genomes_project 6 151904060 151913582 + Arntl2 protein_coding processed_transcript MGP_LPJ_T0080796.1 MGP_LPJ_G0031397.1 mouse_genomes_project 6 151904070 151945294 + MGP_LPJ_P0080796 Arntl2 protein_coding protein_coding MGP_LPJ_T0080797.1 MGP_LPJ_G0031397.1 mouse_genomes_project 6 151913533 151944285 + MGP_LPJ_P0080797 Arntl2 protein_coding protein_coding MGP_LPJ_T0080798.1 MGP_LPJ_G0031397.1 mouse_genomes_project 6 151913533 151944285 + MGP_LPJ_P0080798 Arntl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0080799.1 MGP_LPJ_G0031397.1 mouse_genomes_project 6 151913533 151944285 + MGP_LPJ_P0080799 Arntl2 protein_coding protein_coding MGP_LPJ_T0080800.1 MGP_LPJ_G0031397.1 mouse_genomes_project 6 151913533 151944285 + MGP_LPJ_P0080800 Arntl2 protein_coding protein_coding MGP_LPJ_T0080801.1 MGP_LPJ_G0031397.1 mouse_genomes_project 6 151932055 151934755 + Arntl2 protein_coding retained_intron MGP_LPJ_T0080802.1 MGP_LPJ_G0031397.1 mouse_genomes_project 6 151934213 151935484 + Arntl2 protein_coding retained_intron MGP_LPJ_T0080803.1 MGP_LPJ_G0031397.1 mouse_genomes_project 6 151942168 151945287 + Arntl2 protein_coding retained_intron MGP_LPJ_T0002188.1 MGP_LPJ_G0002097.1 mouse_genomes_project 6 141181336 141183727 + TEC TEC MGP_LPJ_T0008748.1 MGP_LPJ_G0007073.1 mouse_genomes_project 6 131832274 131848514 - 9330102E08Rik lincRNA lincRNA MGP_LPJ_T0077541.1 MGP_LPJ_G0030691.1 mouse_genomes_project 6 56422741 56436186 - MGP_LPJ_P0077541 protein_coding protein_coding MGP_LPJ_T0078375.1 MGP_LPJ_G0030876.1 mouse_genomes_project 6 87984646 88006345 - MGP_LPJ_P0078375 Mxd1 protein_coding protein_coding MGP_LPJ_T0078376.1 MGP_LPJ_G0030876.1 mouse_genomes_project 6 87986620 88000302 - MGP_LPJ_P0078376 Mxd1 protein_coding protein_coding MGP_LPJ_T0078377.1 MGP_LPJ_G0030876.1 mouse_genomes_project 6 87988404 88006284 - MGP_LPJ_P0078377 Mxd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078378.1 MGP_LPJ_G0030876.1 mouse_genomes_project 6 88003384 88006301 - Mxd1 protein_coding retained_intron MGP_LPJ_T0077241.1 MGP_LPJ_G0030619.1 mouse_genomes_project 6 47889215 47893008 + MGP_LPJ_P0077241 1600015I10Rik protein_coding protein_coding MGP_LPJ_T0015595.1 MGP_LPJ_G0013686.1 mouse_genomes_project 6 137245748 137246125 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015493.1 MGP_LPJ_G0013584.1 mouse_genomes_project 6 113198804 113198936 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015467.1 MGP_LPJ_G0013558.1 mouse_genomes_project 6 102718309 102718731 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002716.1 MGP_LPJ_G0002595.1 mouse_genomes_project 6 39654408 39654903 + MGP_LPJ_P0002716 Trbv17 TR_V_gene TR_V_gene MGP_LPJ_T0077538.1 MGP_LPJ_G0030688.1 mouse_genomes_project 6 56378065 56379119 + MGP_LPJ_P0077538 Vmn1r5 protein_coding protein_coding MGP_LPJ_T0080884.1 MGP_LPJ_G0031412.1 mouse_genomes_project 6 154168270 154191998 - MGP_LPJ_P0080884 Fam60a protein_coding protein_coding MGP_LPJ_T0080885.1 MGP_LPJ_G0031412.1 mouse_genomes_project 6 154168464 154195244 - MGP_LPJ_P0080885 Fam60a protein_coding nonsense_mediated_decay MGP_LPJ_T0080886.1 MGP_LPJ_G0031412.1 mouse_genomes_project 6 154172454 154191909 - MGP_LPJ_P0080886 Fam60a protein_coding nonsense_mediated_decay MGP_LPJ_T0080887.1 MGP_LPJ_G0031412.1 mouse_genomes_project 6 154172458 154193341 - MGP_LPJ_P0080887 Fam60a protein_coding protein_coding MGP_LPJ_T0080888.1 MGP_LPJ_G0031412.1 mouse_genomes_project 6 154174989 154193541 - MGP_LPJ_P0080888 Fam60a protein_coding protein_coding MGP_LPJ_T0080889.1 MGP_LPJ_G0031412.1 mouse_genomes_project 6 154177032 154195249 - MGP_LPJ_P0080889 Fam60a protein_coding protein_coding MGP_LPJ_T0080890.1 MGP_LPJ_G0031412.1 mouse_genomes_project 6 154191575 154195277 - Fam60a protein_coding processed_transcript MGP_LPJ_T0102227.1 MGP_LPJ_G0040264.1 mouse_genomes_project 6 56759282 56760171 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0005118.1 MGP_LPJ_G0004367.1 mouse_genomes_project 6 132107290 132127502 - Gm15862 antisense antisense MGP_LPJ_T0077824.1 MGP_LPJ_G0030768.1 mouse_genomes_project 6 72757007 72766398 + MGP_LPJ_P0077824 Sftpb protein_coding protein_coding MGP_LPJ_T0077825.1 MGP_LPJ_G0030768.1 mouse_genomes_project 6 72757017 72766394 + MGP_LPJ_P0077825 Sftpb protein_coding nonsense_mediated_decay MGP_LPJ_T0077826.1 MGP_LPJ_G0030768.1 mouse_genomes_project 6 72757022 72764959 + MGP_LPJ_P0077826 Sftpb protein_coding nonsense_mediated_decay MGP_LPJ_T0077827.1 MGP_LPJ_G0030768.1 mouse_genomes_project 6 72757022 72764959 + MGP_LPJ_P0077827 Sftpb protein_coding protein_coding MGP_LPJ_T0077828.1 MGP_LPJ_G0030768.1 mouse_genomes_project 6 72758460 72766072 + Sftpb protein_coding retained_intron MGP_LPJ_T0015248.1 MGP_LPJ_G0013339.1 mouse_genomes_project 6 35842614 35843161 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099653.1 MGP_LPJ_G0037916.1 mouse_genomes_project 6 65730011 65730117 - Gm23543 snRNA snRNA MGP_LPJ_T0098286.1 MGP_LPJ_G0036567.1 mouse_genomes_project 6 28392351 28392465 + n-R5s161 rRNA rRNA MGP_LPJ_T0015407.1 MGP_LPJ_G0013498.1 mouse_genomes_project 6 79218619 79219115 - processed_pseudogene processed_pseudogene MGP_LPJ_T0076387.1 MGP_LPJ_G0030419.1 mouse_genomes_project 6 27029904 27064664 - Rbm28 protein_coding retained_intron MGP_LPJ_T0076388.1 MGP_LPJ_G0030419.1 mouse_genomes_project 6 27029938 27035996 - MGP_LPJ_P0076388 Rbm28 protein_coding protein_coding MGP_LPJ_T0076389.1 MGP_LPJ_G0030419.1 mouse_genomes_project 6 27030146 27074053 - MGP_LPJ_P0076389 Rbm28 protein_coding protein_coding MGP_LPJ_T0076390.1 MGP_LPJ_G0030419.1 mouse_genomes_project 6 27032371 27074053 - MGP_LPJ_P0076390 Rbm28 protein_coding unknown_likely_coding MGP_LPJ_T0076391.1 MGP_LPJ_G0030419.1 mouse_genomes_project 6 27042120 27062423 - Rbm28 protein_coding retained_intron MGP_LPJ_T0076392.1 MGP_LPJ_G0030419.1 mouse_genomes_project 6 27066252 27069779 - Rbm28 protein_coding retained_intron MGP_LPJ_T0076393.1 MGP_LPJ_G0030419.1 mouse_genomes_project 6 27066712 27069554 - Rbm28 protein_coding retained_intron MGP_LPJ_T0076822.1 MGP_LPJ_G0030494.1 mouse_genomes_project 6 36986449 36999454 - MGP_LPJ_P0076822 Klrg2 protein_coding nonsense_mediated_decay MGP_LPJ_T0076823.1 MGP_LPJ_G0030494.1 mouse_genomes_project 6 36987416 36999454 - MGP_LPJ_P0076823 Klrg2 protein_coding protein_coding MGP_LPJ_T0076824.1 MGP_LPJ_G0030494.1 mouse_genomes_project 6 36988017 36999463 - MGP_LPJ_P0076824 Klrg2 protein_coding protein_coding MGP_LPJ_T0002171.1 MGP_LPJ_G0002080.1 mouse_genomes_project 6 131403546 131405824 - TEC TEC MGP_LPJ_T0077045.1 MGP_LPJ_G0030566.1 mouse_genomes_project 6 41295376 41296330 + MGP_LPJ_P0077045 Olfr452 protein_coding protein_coding MGP_LPJ_T0015473.1 MGP_LPJ_G0013564.1 mouse_genomes_project 6 104827118 104829171 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100882.1 MGP_LPJ_G0039145.1 mouse_genomes_project 6 40749923 40750001 + Gm25108 snoRNA snoRNA MGP_LPJ_T0077662.1 MGP_LPJ_G0030732.1 mouse_genomes_project 6 65231391 65300523 + MGP_LPJ_P0077662 C130060K24Rik protein_coding protein_coding MGP_LPJ_T0077663.1 MGP_LPJ_G0030732.1 mouse_genomes_project 6 65231580 65305708 + MGP_LPJ_P0077663 C130060K24Rik protein_coding protein_coding MGP_LPJ_T0077664.1 MGP_LPJ_G0030732.1 mouse_genomes_project 6 65289153 65300551 + MGP_LPJ_P0077664 C130060K24Rik protein_coding protein_coding MGP_LPJ_T0005158.1 MGP_LPJ_G0004401.1 mouse_genomes_project 6 154192052 154195963 + antisense antisense MGP_LPJ_T0005159.1 MGP_LPJ_G0004401.1 mouse_genomes_project 6 154192052 154195955 + antisense antisense MGP_LPJ_T0080569.1 MGP_LPJ_G0031354.1 mouse_genomes_project 6 145477202 145537697 + MGP_LPJ_P0080569 Aebp2 protein_coding protein_coding MGP_LPJ_T0080570.1 MGP_LPJ_G0031354.1 mouse_genomes_project 6 145477208 145510671 + MGP_LPJ_P0080570 Aebp2 protein_coding protein_coding MGP_LPJ_T0080571.1 MGP_LPJ_G0031354.1 mouse_genomes_project 6 145477811 145536630 + MGP_LPJ_P0080571 Aebp2 protein_coding protein_coding MGP_LPJ_T0080572.1 MGP_LPJ_G0031354.1 mouse_genomes_project 6 145478512 145508628 + MGP_LPJ_P0080572 Aebp2 protein_coding protein_coding MGP_LPJ_T0080573.1 MGP_LPJ_G0031354.1 mouse_genomes_project 6 145480445 145509709 + MGP_LPJ_P0080573 Aebp2 protein_coding protein_coding MGP_LPJ_T0080574.1 MGP_LPJ_G0031354.1 mouse_genomes_project 6 145492899 145494334 + Aebp2 protein_coding retained_intron MGP_LPJ_T0080575.1 MGP_LPJ_G0031354.1 mouse_genomes_project 6 145493917 145511294 + MGP_LPJ_P0080575 Aebp2 protein_coding protein_coding MGP_LPJ_T0080576.1 MGP_LPJ_G0031354.1 mouse_genomes_project 6 145499951 145508914 + Aebp2 protein_coding processed_transcript MGP_LPJ_T0080577.1 MGP_LPJ_G0031354.1 mouse_genomes_project 6 145503792 145505279 + Aebp2 protein_coding processed_transcript MGP_LPJ_T0000360.1 MGP_LPJ_G0000298.1 mouse_genomes_project 6 70560202 70560768 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0078226.1 MGP_LPJ_G0030846.1 mouse_genomes_project 6 86247865 86256831 - MGP_LPJ_P0078226 Spr protein_coding nonsense_mediated_decay MGP_LPJ_T0078227.1 MGP_LPJ_G0030846.1 mouse_genomes_project 6 86252138 86256831 - MGP_LPJ_P0078227 Spr protein_coding protein_coding MGP_LPJ_T0078228.1 MGP_LPJ_G0030846.1 mouse_genomes_project 6 86252147 86256821 - MGP_LPJ_P0078228 Spr protein_coding protein_coding MGP_LPJ_T0078229.1 MGP_LPJ_G0030846.1 mouse_genomes_project 6 86252460 86256827 - MGP_LPJ_P0078229 Spr protein_coding protein_coding MGP_LPJ_T0015176.1 MGP_LPJ_G0013267.1 mouse_genomes_project 6 10098 11627 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001965.1 MGP_LPJ_G0001875.1 mouse_genomes_project 6 26088253 26092180 - TEC TEC MGP_LPJ_T0008804.1 MGP_LPJ_G0007110.1 mouse_genomes_project 6 154160688 154167770 - Gm43913 lincRNA lincRNA MGP_LPJ_T0002203.1 MGP_LPJ_G0002112.1 mouse_genomes_project 6 150328390 150330950 - TEC TEC MGP_LPJ_T0080081.1 MGP_LPJ_G0031209.1 mouse_genomes_project 6 130606265 130618807 + MGP_LPJ_P0080081 Fgf6 protein_coding protein_coding MGP_LPJ_T0002202.1 MGP_LPJ_G0002111.1 mouse_genomes_project 6 150218213 150221397 - TEC TEC MGP_LPJ_T0015620.1 MGP_LPJ_G0013711.1 mouse_genomes_project 6 150410139 150411135 - processed_pseudogene processed_pseudogene MGP_LPJ_T0079280.1 MGP_LPJ_G0031055.1 mouse_genomes_project 6 118471023 118493131 - MGP_LPJ_P0079280 Efcab12 protein_coding protein_coding MGP_LPJ_T0079281.1 MGP_LPJ_G0031055.1 mouse_genomes_project 6 118471190 118493131 - MGP_LPJ_P0079281 Efcab12 protein_coding protein_coding MGP_LPJ_T0079282.1 MGP_LPJ_G0031055.1 mouse_genomes_project 6 118471190 118493131 - MGP_LPJ_P0079282 Efcab12 protein_coding nonsense_mediated_decay MGP_LPJ_T0076907.1 MGP_LPJ_G0030512.1 mouse_genomes_project 6 38904506 38921393 + MGP_LPJ_P0076907 Wee2 protein_coding protein_coding MGP_LPJ_T0076908.1 MGP_LPJ_G0030512.1 mouse_genomes_project 6 38909347 38933044 + MGP_LPJ_P0076908 Wee2 protein_coding protein_coding MGP_LPJ_T0076909.1 MGP_LPJ_G0030512.1 mouse_genomes_project 6 38909421 38910639 + MGP_LPJ_P0076909 Wee2 protein_coding protein_coding MGP_LPJ_T0000165.1 MGP_LPJ_G0000122.1 mouse_genomes_project 6 68019201 68289788 + MGP_LPJ_P0000165 Igkv1-117 IG_V_gene IG_V_gene MGP_LPJ_T0002754.1 MGP_LPJ_G0002626.1 mouse_genomes_project 6 39566420 39566822 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0099668.1 MGP_LPJ_G0037931.1 mouse_genomes_project 6 105783492 105783554 + Gm24784 snRNA snRNA MGP_LPJ_T0077189.1 MGP_LPJ_G0030606.1 mouse_genomes_project 6 47557582 47565921 + MGP_LPJ_P0077189 AI854703 protein_coding protein_coding MGP_LPJ_T0077190.1 MGP_LPJ_G0030606.1 mouse_genomes_project 6 47558041 47560282 + MGP_LPJ_P0077190 AI854703 protein_coding protein_coding MGP_LPJ_T0077191.1 MGP_LPJ_G0030606.1 mouse_genomes_project 6 47558099 47560282 + MGP_LPJ_P0077191 AI854703 protein_coding protein_coding MGP_LPJ_T0077192.1 MGP_LPJ_G0030606.1 mouse_genomes_project 6 47558753 47565925 + MGP_LPJ_P0077192 AI854703 protein_coding protein_coding MGP_LPJ_T0077865.1 MGP_LPJ_G0030776.1 mouse_genomes_project 6 72893283 72901558 - MGP_LPJ_P0077865 Mat2a protein_coding protein_coding MGP_LPJ_T0077866.1 MGP_LPJ_G0030776.1 mouse_genomes_project 6 72893283 72901560 - MGP_LPJ_P0077866 Mat2a protein_coding protein_coding MGP_LPJ_T0077867.1 MGP_LPJ_G0030776.1 mouse_genomes_project 6 72896546 72901558 - MGP_LPJ_P0077867 Mat2a protein_coding protein_coding MGP_LPJ_T0077868.1 MGP_LPJ_G0030776.1 mouse_genomes_project 6 72897812 72901390 - MGP_LPJ_P0077868 Mat2a protein_coding protein_coding MGP_LPJ_T0077869.1 MGP_LPJ_G0030776.1 mouse_genomes_project 6 72898418 72901542 - Mat2a protein_coding retained_intron MGP_LPJ_T0077870.1 MGP_LPJ_G0030776.1 mouse_genomes_project 6 72898749 72901545 - Mat2a protein_coding retained_intron MGP_LPJ_T0077871.1 MGP_LPJ_G0030776.1 mouse_genomes_project 6 72899401 72901550 - Mat2a protein_coding processed_transcript MGP_LPJ_T0077872.1 MGP_LPJ_G0030776.1 mouse_genomes_project 6 72900803 72901558 - Mat2a protein_coding retained_intron MGP_LPJ_T0002008.1 MGP_LPJ_G0001918.1 mouse_genomes_project 6 45506970 45510720 + TEC TEC MGP_LPJ_T0015491.1 MGP_LPJ_G0013582.1 mouse_genomes_project 6 112448181 112448725 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015294.1 MGP_LPJ_G0013385.1 mouse_genomes_project 6 48145314 48145516 + processed_pseudogene processed_pseudogene MGP_LPJ_T0076747.1 MGP_LPJ_G0030478.1 mouse_genomes_project 6 34669033 34806686 + MGP_LPJ_P0076747 Chrm2 protein_coding protein_coding MGP_LPJ_T0076748.1 MGP_LPJ_G0030478.1 mouse_genomes_project 6 34669144 34724897 + Chrm2 protein_coding processed_transcript MGP_LPJ_T0001950.1 MGP_LPJ_G0001860.1 mouse_genomes_project 6 12866640 12868889 + TEC TEC MGP_LPJ_T0077933.1 MGP_LPJ_G0030790.1 mouse_genomes_project 6 77944900 77959744 + MGP_LPJ_P0077933 Lrrtm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0077934.1 MGP_LPJ_G0030790.1 mouse_genomes_project 6 77944908 77947729 + MGP_LPJ_P0077934 Lrrtm1 protein_coding protein_coding MGP_LPJ_T0077935.1 MGP_LPJ_G0030790.1 mouse_genomes_project 6 77944929 77947723 + MGP_LPJ_P0077935 Lrrtm1 protein_coding protein_coding MGP_LPJ_T0077936.1 MGP_LPJ_G0030790.1 mouse_genomes_project 6 77945133 77946324 + MGP_LPJ_P0077936 Lrrtm1 protein_coding protein_coding MGP_LPJ_T0005027.1 MGP_LPJ_G0004303.1 mouse_genomes_project 6 85149478 85163840 - Gm15475 antisense antisense MGP_LPJ_T0076895.1 MGP_LPJ_G0030510.1 mouse_genomes_project 6 38782962 38854255 + MGP_LPJ_P0076895 Agk protein_coding protein_coding MGP_LPJ_T0076896.1 MGP_LPJ_G0030510.1 mouse_genomes_project 6 38783006 38826364 + Agk protein_coding retained_intron MGP_LPJ_T0076897.1 MGP_LPJ_G0030510.1 mouse_genomes_project 6 38783008 38784289 + Agk protein_coding retained_intron MGP_LPJ_T0076898.1 MGP_LPJ_G0030510.1 mouse_genomes_project 6 38783029 38806953 + Agk protein_coding retained_intron MGP_LPJ_T0076899.1 MGP_LPJ_G0030510.1 mouse_genomes_project 6 38786945 38805602 + Agk protein_coding processed_transcript MGP_LPJ_T0076900.1 MGP_LPJ_G0030510.1 mouse_genomes_project 6 38786945 38815002 + MGP_LPJ_P0076900 Agk protein_coding nonsense_mediated_decay MGP_LPJ_T0076901.1 MGP_LPJ_G0030510.1 mouse_genomes_project 6 38807497 38810499 + Agk protein_coding retained_intron MGP_LPJ_T0076902.1 MGP_LPJ_G0030510.1 mouse_genomes_project 6 38833515 38854162 + Agk protein_coding retained_intron MGP_LPJ_T0077434.1 MGP_LPJ_G0030664.1 mouse_genomes_project 6 53802264 53810447 - MGP_LPJ_P0077434 Scrn1 protein_coding protein_coding MGP_LPJ_T0077435.1 MGP_LPJ_G0030664.1 mouse_genomes_project 6 53806987 53868587 - MGP_LPJ_P0077435 Scrn1 protein_coding protein_coding MGP_LPJ_T0077436.1 MGP_LPJ_G0030664.1 mouse_genomes_project 6 53807362 53823140 - MGP_LPJ_P0077436 Scrn1 protein_coding protein_coding MGP_LPJ_T0077437.1 MGP_LPJ_G0030664.1 mouse_genomes_project 6 53810193 53815903 - Scrn1 protein_coding retained_intron MGP_LPJ_T0077438.1 MGP_LPJ_G0030664.1 mouse_genomes_project 6 53836692 53856573 - MGP_LPJ_P0077438 Scrn1 protein_coding protein_coding MGP_LPJ_T0077439.1 MGP_LPJ_G0030664.1 mouse_genomes_project 6 53853835 53856564 - Scrn1 protein_coding processed_transcript MGP_LPJ_T0078802.1 MGP_LPJ_G0030965.1 mouse_genomes_project 6 96892493 96897158 + MGP_LPJ_P0078802 Kbtbd8 protein_coding protein_coding MGP_LPJ_T0078803.1 MGP_LPJ_G0030965.1 mouse_genomes_project 6 96893211 96902208 + MGP_LPJ_P0078803 Kbtbd8 protein_coding protein_coding MGP_LPJ_T0078804.1 MGP_LPJ_G0030965.1 mouse_genomes_project 6 96893236 96897065 + Kbtbd8 protein_coding processed_transcript MGP_LPJ_T0076356.1 MGP_LPJ_G0030412.1 mouse_genomes_project 6 26277088 26282724 - MGP_LPJ_P0076356 Gcc1 protein_coding protein_coding MGP_LPJ_T0076357.1 MGP_LPJ_G0030412.1 mouse_genomes_project 6 26278826 26289280 - MGP_LPJ_P0076357 Gcc1 protein_coding protein_coding MGP_LPJ_T0076358.1 MGP_LPJ_G0030412.1 mouse_genomes_project 6 26280659 26281858 - MGP_LPJ_P0076358 Gcc1 protein_coding protein_coding MGP_LPJ_T0076359.1 MGP_LPJ_G0030412.1 mouse_genomes_project 6 26282279 26285109 - MGP_LPJ_P0076359 Gcc1 protein_coding protein_coding MGP_LPJ_T0008786.1 MGP_LPJ_G0007096.1 mouse_genomes_project 6 148581300 148645368 - 1700060C16Rik lincRNA lincRNA MGP_LPJ_T0002046.1 MGP_LPJ_G0001956.1 mouse_genomes_project 6 76204267 76205634 - TEC TEC MGP_LPJ_T0080064.1 MGP_LPJ_G0031207.1 mouse_genomes_project 6 130512609 130531899 - MGP_LPJ_P0080064 Rad51ap1 protein_coding protein_coding MGP_LPJ_T0080065.1 MGP_LPJ_G0031207.1 mouse_genomes_project 6 130512974 130515372 - Rad51ap1 protein_coding retained_intron MGP_LPJ_T0080066.1 MGP_LPJ_G0031207.1 mouse_genomes_project 6 130512974 130531899 - MGP_LPJ_P0080066 Rad51ap1 protein_coding protein_coding MGP_LPJ_T0080067.1 MGP_LPJ_G0031207.1 mouse_genomes_project 6 130513738 130515278 - Rad51ap1 protein_coding processed_transcript MGP_LPJ_T0080068.1 MGP_LPJ_G0031207.1 mouse_genomes_project 6 130514549 130517815 - Rad51ap1 protein_coding retained_intron MGP_LPJ_T0080069.1 MGP_LPJ_G0031207.1 mouse_genomes_project 6 130515904 130531883 - MGP_LPJ_P0080069 Rad51ap1 protein_coding protein_coding MGP_LPJ_T0080070.1 MGP_LPJ_G0031207.1 mouse_genomes_project 6 130515920 130517653 - Rad51ap1 protein_coding retained_intron MGP_LPJ_T0080071.1 MGP_LPJ_G0031207.1 mouse_genomes_project 6 130517189 130531858 - Rad51ap1 protein_coding processed_transcript MGP_LPJ_T0080072.1 MGP_LPJ_G0031207.1 mouse_genomes_project 6 130517651 130531887 - MGP_LPJ_P0080072 Rad51ap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0080073.1 MGP_LPJ_G0031207.1 mouse_genomes_project 6 130518222 130531899 - Rad51ap1 protein_coding retained_intron MGP_LPJ_T0079357.1 MGP_LPJ_G0031066.1 mouse_genomes_project 6 119091373 119146049 - MGP_LPJ_P0079357 Alox5 protein_coding protein_coding MGP_LPJ_T0079358.1 MGP_LPJ_G0031066.1 mouse_genomes_project 6 119091570 119146002 - Alox5 protein_coding retained_intron MGP_LPJ_T0079359.1 MGP_LPJ_G0031066.1 mouse_genomes_project 6 119091572 119094068 - Alox5 protein_coding retained_intron MGP_LPJ_T0079360.1 MGP_LPJ_G0031066.1 mouse_genomes_project 6 119091903 119145895 - MGP_LPJ_P0079360 Alox5 protein_coding nonsense_mediated_decay MGP_LPJ_T0079361.1 MGP_LPJ_G0031066.1 mouse_genomes_project 6 119092015 119145895 - MGP_LPJ_P0079361 Alox5 protein_coding protein_coding MGP_LPJ_T0079362.1 MGP_LPJ_G0031066.1 mouse_genomes_project 6 119092015 119145895 - MGP_LPJ_P0079362 Alox5 protein_coding protein_coding MGP_LPJ_T0079363.1 MGP_LPJ_G0031066.1 mouse_genomes_project 6 119093866 119095296 - Alox5 protein_coding retained_intron MGP_LPJ_T0079364.1 MGP_LPJ_G0031066.1 mouse_genomes_project 6 119096745 119106095 - Alox5 protein_coding processed_transcript MGP_LPJ_T0079181.1 MGP_LPJ_G0031037.1 mouse_genomes_project 6 116314010 116620236 - MGP_LPJ_P0079181 Atp2b2 protein_coding protein_coding MGP_LPJ_T0079182.1 MGP_LPJ_G0031037.1 mouse_genomes_project 6 116314017 116415326 - MGP_LPJ_P0079182 Atp2b2 protein_coding unknown_likely_coding MGP_LPJ_T0079183.1 MGP_LPJ_G0031037.1 mouse_genomes_project 6 116315848 116464605 - MGP_LPJ_P0079183 Atp2b2 protein_coding protein_coding MGP_LPJ_T0079184.1 MGP_LPJ_G0031037.1 mouse_genomes_project 6 116315849 116620236 - MGP_LPJ_P0079184 Atp2b2 protein_coding nonsense_mediated_decay MGP_LPJ_T0079185.1 MGP_LPJ_G0031037.1 mouse_genomes_project 6 116317245 116464605 - MGP_LPJ_P0079185 Atp2b2 protein_coding protein_coding MGP_LPJ_T0079186.1 MGP_LPJ_G0031037.1 mouse_genomes_project 6 116318473 116512453 - MGP_LPJ_P0079186 Atp2b2 protein_coding protein_coding MGP_LPJ_T0079187.1 MGP_LPJ_G0031037.1 mouse_genomes_project 6 116376301 116464436 - Atp2b2 protein_coding retained_intron MGP_LPJ_T0079188.1 MGP_LPJ_G0031037.1 mouse_genomes_project 6 116415326 116484442 - Atp2b2 protein_coding processed_transcript MGP_LPJ_T0079189.1 MGP_LPJ_G0031037.1 mouse_genomes_project 6 116415544 116620748 - Atp2b2 protein_coding processed_transcript MGP_LPJ_T0015252.1 MGP_LPJ_G0013343.1 mouse_genomes_project 6 36189895 36190620 - processed_pseudogene processed_pseudogene MGP_LPJ_T0076669.1 MGP_LPJ_G0030466.1 mouse_genomes_project 6 32811959 32991733 + MGP_LPJ_P0076669 Cald1 protein_coding protein_coding MGP_LPJ_T0076670.1 MGP_LPJ_G0030466.1 mouse_genomes_project 6 32811971 32968334 + MGP_LPJ_P0076670 Cald1 protein_coding protein_coding MGP_LPJ_T0076671.1 MGP_LPJ_G0030466.1 mouse_genomes_project 6 32812003 32901741 + Cald1 protein_coding retained_intron MGP_LPJ_T0076672.1 MGP_LPJ_G0030466.1 mouse_genomes_project 6 32812003 32956206 + Cald1 protein_coding retained_intron MGP_LPJ_T0076673.1 MGP_LPJ_G0030466.1 mouse_genomes_project 6 32812023 32991745 + MGP_LPJ_P0076673 Cald1 protein_coding protein_coding MGP_LPJ_T0076674.1 MGP_LPJ_G0030466.1 mouse_genomes_project 6 32812024 32991745 + MGP_LPJ_P0076674 Cald1 protein_coding protein_coding MGP_LPJ_T0076675.1 MGP_LPJ_G0030466.1 mouse_genomes_project 6 32812083 32876313 + Cald1 protein_coding retained_intron MGP_LPJ_T0076676.1 MGP_LPJ_G0030466.1 mouse_genomes_project 6 32923429 32991752 + MGP_LPJ_P0076676 Cald1 protein_coding protein_coding MGP_LPJ_T0076677.1 MGP_LPJ_G0030466.1 mouse_genomes_project 6 32923477 32924742 + Cald1 protein_coding retained_intron MGP_LPJ_T0076678.1 MGP_LPJ_G0030466.1 mouse_genomes_project 6 32923477 32991747 + MGP_LPJ_P0076678 Cald1 protein_coding nonsense_mediated_decay MGP_LPJ_T0076679.1 MGP_LPJ_G0030466.1 mouse_genomes_project 6 32923621 32989973 + MGP_LPJ_P0076679 Cald1 protein_coding protein_coding MGP_LPJ_T0076680.1 MGP_LPJ_G0030466.1 mouse_genomes_project 6 32960722 32970639 + MGP_LPJ_P0076680 Cald1 protein_coding protein_coding MGP_LPJ_T0076681.1 MGP_LPJ_G0030466.1 mouse_genomes_project 6 32960751 32970549 + MGP_LPJ_P0076681 Cald1 protein_coding protein_coding MGP_LPJ_T0076682.1 MGP_LPJ_G0030466.1 mouse_genomes_project 6 32960777 32970549 + MGP_LPJ_P0076682 Cald1 protein_coding protein_coding MGP_LPJ_T0076683.1 MGP_LPJ_G0030466.1 mouse_genomes_project 6 32961156 32978373 + MGP_LPJ_P0076683 Cald1 protein_coding protein_coding MGP_LPJ_T0076684.1 MGP_LPJ_G0030466.1 mouse_genomes_project 6 32962540 32968253 + Cald1 protein_coding retained_intron MGP_LPJ_T0076685.1 MGP_LPJ_G0030466.1 mouse_genomes_project 6 32979106 32983092 + Cald1 protein_coding retained_intron MGP_LPJ_T0076686.1 MGP_LPJ_G0030466.1 mouse_genomes_project 6 32981215 32982899 + Cald1 protein_coding retained_intron MGP_LPJ_T0101390.1 MGP_LPJ_G0039577.1 mouse_genomes_project 6 126217176 126220272 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101391.1 MGP_LPJ_G0039577.1 mouse_genomes_project 6 126217591 126217861 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0077912.1 MGP_LPJ_G0030784.1 mouse_genomes_project 6 73468165 73468910 - MGP_LPJ_P0077912 protein_coding protein_coding MGP_LPJ_T0002177.1 MGP_LPJ_G0002086.1 mouse_genomes_project 6 132891747 132891944 - TEC TEC MGP_LPJ_T0077026.1 MGP_LPJ_G0030558.1 mouse_genomes_project 6 40951823 40987084 - MGP_LPJ_P0077026 Olfr457 protein_coding protein_coding MGP_LPJ_T0077028.1 MGP_LPJ_G0030558.1 mouse_genomes_project 6 40982551 40987074 - MGP_LPJ_P0077028 Olfr457 protein_coding protein_coding MGP_LPJ_T0015570.1 MGP_LPJ_G0013661.1 mouse_genomes_project 6 133571597 133572089 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015417.1 MGP_LPJ_G0013508.1 mouse_genomes_project 6 84626435 84627207 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015413.1 MGP_LPJ_G0013504.1 mouse_genomes_project 6 83868186 83869380 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015296.1 MGP_LPJ_G0013387.1 mouse_genomes_project 6 48424065 48424889 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015199.1 MGP_LPJ_G0013290.1 mouse_genomes_project 6 7749385 7750286 - processed_pseudogene processed_pseudogene MGP_LPJ_T0077183.1 MGP_LPJ_G0030604.1 mouse_genomes_project 6 47526836 47544208 + Gm44965 protein_coding processed_transcript MGP_LPJ_T0077184.1 MGP_LPJ_G0030604.1 mouse_genomes_project 6 47526839 47550235 + MGP_LPJ_P0077184 Gm44965 protein_coding nonsense_mediated_decay MGP_LPJ_T0080306.1 MGP_LPJ_G0031293.1 mouse_genomes_project 6 137083683 137084834 + MGP_LPJ_P0080306 Tas2r117 protein_coding protein_coding MGP_LPJ_T0005650.1 MGP_LPJ_G0004759.1 mouse_genomes_project 6 88198781 88199823 - 2610306M01Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_LPJ_T0076037.1 MGP_LPJ_G0030347.1 mouse_genomes_project 6 3832605 3924569 + MGP_LPJ_P0076037 Sdhaf3 protein_coding protein_coding MGP_LPJ_T0076038.1 MGP_LPJ_G0030347.1 mouse_genomes_project 6 3832608 3848136 + Sdhaf3 protein_coding processed_transcript MGP_LPJ_T0002113.1 MGP_LPJ_G0002023.1 mouse_genomes_project 6 93455832 93456907 - TEC TEC MGP_LPJ_T0077680.1 MGP_LPJ_G0030736.1 mouse_genomes_project 6 65816063 65817469 + MGP_LPJ_P0077680 4930544G11Rik protein_coding protein_coding MGP_LPJ_T0015521.1 MGP_LPJ_G0013612.1 mouse_genomes_project 6 122853939 122854227 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000359.1 MGP_LPJ_G0000297.1 mouse_genomes_project 6 70502458 70502730 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0008769.1 MGP_LPJ_G0007085.1 mouse_genomes_project 6 140106095 140130467 + 4930425L21Rik lincRNA lincRNA MGP_LPJ_T0008770.1 MGP_LPJ_G0007085.1 mouse_genomes_project 6 140127235 140131599 + 4930425L21Rik lincRNA lincRNA MGP_LPJ_T0077748.1 MGP_LPJ_G0030756.1 mouse_genomes_project 6 71775584 71779972 + Cd8a protein_coding retained_intron MGP_LPJ_T0077749.1 MGP_LPJ_G0030756.1 mouse_genomes_project 6 71775589 71779276 + MGP_LPJ_P0077749 Cd8a protein_coding protein_coding MGP_LPJ_T0010770.1 MGP_LPJ_G0008888.1 mouse_genomes_project 6 25765843 25765939 - Mir592 miRNA miRNA MGP_LPJ_T0077617.1 MGP_LPJ_G0030723.1 mouse_genomes_project 6 58777853 58781017 + MGP_LPJ_P0077617 Tigd2 protein_coding protein_coding MGP_LPJ_T0078940.1 MGP_LPJ_G0030993.1 mouse_genomes_project 6 109035487 109075779 - MGP_LPJ_P0078940 Il5ra protein_coding protein_coding MGP_LPJ_T0078941.1 MGP_LPJ_G0030993.1 mouse_genomes_project 6 109035735 109075690 - MGP_LPJ_P0078941 Il5ra protein_coding protein_coding MGP_LPJ_T0078942.1 MGP_LPJ_G0030993.1 mouse_genomes_project 6 109037103 109071867 - MGP_LPJ_P0078942 Il5ra protein_coding protein_coding MGP_LPJ_T0015287.1 MGP_LPJ_G0013378.1 mouse_genomes_project 6 47918397 47918881 + processed_pseudogene processed_pseudogene MGP_LPJ_T0079596.1 MGP_LPJ_G0031108.1 mouse_genomes_project 6 123741199 123776233 + Bcl2l13 protein_coding retained_intron MGP_LPJ_T0079597.1 MGP_LPJ_G0031108.1 mouse_genomes_project 6 123741199 123773981 + MGP_LPJ_P0079597 Bcl2l13 protein_coding protein_coding MGP_LPJ_T0079598.1 MGP_LPJ_G0031108.1 mouse_genomes_project 6 123741213 123784369 + MGP_LPJ_P0079598 Bcl2l13 protein_coding protein_coding MGP_LPJ_T0079599.1 MGP_LPJ_G0031108.1 mouse_genomes_project 6 123741225 123803945 + MGP_LPJ_P0079599 Bcl2l13 protein_coding protein_coding MGP_LPJ_T0080294.1 MGP_LPJ_G0031282.1 mouse_genomes_project 6 136701136 136712523 - MGP_LPJ_P0080294 Prpmp5 protein_coding protein_coding MGP_LPJ_T0001989.1 MGP_LPJ_G0001899.1 mouse_genomes_project 6 43833517 43835730 + TEC TEC MGP_LPJ_T0076918.1 MGP_LPJ_G0030515.1 mouse_genomes_project 6 38959711 38960724 + MGP_LPJ_P0076918 Tas2r108 protein_coding protein_coding MGP_LPJ_T0079340.1 MGP_LPJ_G0031063.1 mouse_genomes_project 6 118936371 119004208 + MGP_LPJ_P0079340 Zfand4 protein_coding protein_coding MGP_LPJ_T0015573.1 MGP_LPJ_G0013664.1 mouse_genomes_project 6 134425011 134425356 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008534.1 MGP_LPJ_G0006910.1 mouse_genomes_project 6 16700154 16742513 - lincRNA lincRNA MGP_LPJ_T0077193.1 MGP_LPJ_G0030607.1 mouse_genomes_project 6 47579882 47591816 + MGP_LPJ_P0077193 Gimap8 protein_coding protein_coding MGP_LPJ_T0010775.1 MGP_LPJ_G0008893.1 mouse_genomes_project 6 28158007 28158113 - Mir96 miRNA miRNA MGP_LPJ_T0098288.1 MGP_LPJ_G0036569.1 mouse_genomes_project 6 88642059 88642171 + n-R5s164 rRNA rRNA MGP_LPJ_T0002128.1 MGP_LPJ_G0002038.1 mouse_genomes_project 6 102756878 102758403 - TEC TEC MGP_LPJ_T0100897.1 MGP_LPJ_G0039160.1 mouse_genomes_project 6 67792085 67792221 - Gm24911 snoRNA snoRNA MGP_LPJ_T0002099.1 MGP_LPJ_G0002009.1 mouse_genomes_project 6 90218128 90223022 - TEC TEC MGP_LPJ_T0008694.1 MGP_LPJ_G0007026.1 mouse_genomes_project 6 92990594 92991363 + 1810044D09Rik lincRNA lincRNA MGP_LPJ_T0015219.1 MGP_LPJ_G0013310.1 mouse_genomes_project 6 16784938 16786485 - processed_pseudogene processed_pseudogene MGP_LPJ_T0079300.1 MGP_LPJ_G0031058.1 mouse_genomes_project 6 118581997 118590278 + MGP_LPJ_P0079300 Rho protein_coding protein_coding MGP_LPJ_T0079301.1 MGP_LPJ_G0031058.1 mouse_genomes_project 6 118582174 118584353 + Rho protein_coding retained_intron MGP_LPJ_T0079302.1 MGP_LPJ_G0031058.1 mouse_genomes_project 6 118582806 118586963 + MGP_LPJ_P0079302 Rho protein_coding protein_coding MGP_LPJ_T0079303.1 MGP_LPJ_G0031058.1 mouse_genomes_project 6 118584595 118587208 + MGP_LPJ_P0079303 Rho protein_coding protein_coding MGP_LPJ_T0079304.1 MGP_LPJ_G0031058.1 mouse_genomes_project 6 118584626 118587328 + MGP_LPJ_P0079304 Rho protein_coding nonsense_mediated_decay MGP_LPJ_T0079305.1 MGP_LPJ_G0031058.1 mouse_genomes_project 6 118584992 118586299 + Rho protein_coding retained_intron MGP_LPJ_T0079306.1 MGP_LPJ_G0031058.1 mouse_genomes_project 6 118585451 118586484 + Rho protein_coding retained_intron MGP_LPJ_T0015319.1 MGP_LPJ_G0013410.1 mouse_genomes_project 6 58339914 58340160 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000337.1 MGP_LPJ_G0000275.1 mouse_genomes_project 6 68938518 68938914 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0005152.1 MGP_LPJ_G0004396.1 mouse_genomes_project 6 152109311 152110869 - Gm44085 antisense antisense MGP_LPJ_T0102269.1 MGP_LPJ_G0040306.1 mouse_genomes_project 6 134793919 134802038 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0102265.1 MGP_LPJ_G0040302.1 mouse_genomes_project 6 133877697 134210135 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0015327.1 MGP_LPJ_G0013418.1 mouse_genomes_project 6 62043186 62043495 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002200.1 MGP_LPJ_G0002109.1 mouse_genomes_project 6 146333490 146337035 + TEC TEC MGP_LPJ_T0077549.1 MGP_LPJ_G0030699.1 mouse_genomes_project 6 56806625 56807664 - MGP_LPJ_P0077549 Vmn1r17 protein_coding protein_coding MGP_LPJ_T0076793.1 MGP_LPJ_G0030490.1 mouse_genomes_project 6 36727703 36776017 + MGP_LPJ_P0076793 Ttc26 protein_coding protein_coding MGP_LPJ_T0076794.1 MGP_LPJ_G0030490.1 mouse_genomes_project 6 36727759 36741399 + MGP_LPJ_P0076794 Ttc26 protein_coding protein_coding MGP_LPJ_T0076795.1 MGP_LPJ_G0030490.1 mouse_genomes_project 6 36727759 36776017 + MGP_LPJ_P0076795 Ttc26 protein_coding nonsense_mediated_decay MGP_LPJ_T0076796.1 MGP_LPJ_G0030490.1 mouse_genomes_project 6 36727763 36744577 + MGP_LPJ_P0076796 Ttc26 protein_coding nonsense_mediated_decay MGP_LPJ_T0076797.1 MGP_LPJ_G0030490.1 mouse_genomes_project 6 36737763 36741737 + Ttc26 protein_coding retained_intron MGP_LPJ_T0011662.1 MGP_LPJ_G0009780.1 mouse_genomes_project 6 51468195 51468399 + Gm27454 misc_RNA misc_RNA MGP_LPJ_T0008780.1 MGP_LPJ_G0007094.1 mouse_genomes_project 6 148227265 148230489 + D6Ertd474e lincRNA lincRNA MGP_LPJ_T0008781.1 MGP_LPJ_G0007094.1 mouse_genomes_project 6 148227265 148276236 + D6Ertd474e lincRNA lincRNA MGP_LPJ_T0008782.1 MGP_LPJ_G0007094.1 mouse_genomes_project 6 148227270 148276581 + D6Ertd474e lincRNA lincRNA MGP_LPJ_T0008783.1 MGP_LPJ_G0007094.1 mouse_genomes_project 6 148227270 148277788 + D6Ertd474e lincRNA lincRNA MGP_LPJ_T0008784.1 MGP_LPJ_G0007094.1 mouse_genomes_project 6 148266650 148276545 + D6Ertd474e lincRNA lincRNA MGP_LPJ_T0011639.1 MGP_LPJ_G0009757.1 mouse_genomes_project 6 15040051 15040235 + Gm27960 misc_RNA misc_RNA MGP_LPJ_T0077729.1 MGP_LPJ_G0030749.1 mouse_genomes_project 6 71285143 71290984 - MGP_LPJ_P0077729 Tex37 protein_coding protein_coding MGP_LPJ_T0005157.1 MGP_LPJ_G0004400.1 mouse_genomes_project 6 153552397 153555708 + Gm44020 antisense antisense MGP_LPJ_T0080808.1 MGP_LPJ_G0031399.1 mouse_genomes_project 6 152006992 152149173 + MGP_LPJ_P0080808 Ppfibp1 protein_coding protein_coding MGP_LPJ_T0080809.1 MGP_LPJ_G0031399.1 mouse_genomes_project 6 152007014 152095141 + MGP_LPJ_P0080809 Ppfibp1 protein_coding protein_coding MGP_LPJ_T0080810.1 MGP_LPJ_G0031399.1 mouse_genomes_project 6 152007094 152149173 + MGP_LPJ_P0080810 Ppfibp1 protein_coding protein_coding MGP_LPJ_T0080813.1 MGP_LPJ_G0031399.1 mouse_genomes_project 6 152093563 152109383 + MGP_LPJ_P0080813 Ppfibp1 protein_coding protein_coding MGP_LPJ_T0080814.1 MGP_LPJ_G0031399.1 mouse_genomes_project 6 152109427 152122817 + MGP_LPJ_P0080814 Ppfibp1 protein_coding protein_coding MGP_LPJ_T0080815.1 MGP_LPJ_G0031399.1 mouse_genomes_project 6 152113280 152119067 + Ppfibp1 protein_coding processed_transcript MGP_LPJ_T0080816.1 MGP_LPJ_G0031399.1 mouse_genomes_project 6 152116369 152149171 + Ppfibp1 protein_coding retained_intron MGP_LPJ_T0080817.1 MGP_LPJ_G0031399.1 mouse_genomes_project 6 152117138 152134568 + Ppfibp1 protein_coding retained_intron MGP_LPJ_T0080818.1 MGP_LPJ_G0031399.1 mouse_genomes_project 6 152118511 152122845 + Ppfibp1 protein_coding retained_intron MGP_LPJ_T0080819.1 MGP_LPJ_G0031399.1 mouse_genomes_project 6 152119060 152136304 + MGP_LPJ_P0080819 Ppfibp1 protein_coding protein_coding MGP_LPJ_T0080820.1 MGP_LPJ_G0031399.1 mouse_genomes_project 6 152121928 152123175 + Ppfibp1 protein_coding retained_intron MGP_LPJ_T0080821.1 MGP_LPJ_G0031399.1 mouse_genomes_project 6 152127739 152136711 + MGP_LPJ_P0080821 Ppfibp1 protein_coding protein_coding MGP_LPJ_T0011657.1 MGP_LPJ_G0009775.1 mouse_genomes_project 6 51382312 51382455 + Gm27477 misc_RNA misc_RNA MGP_LPJ_T0008691.1 MGP_LPJ_G0007024.1 mouse_genomes_project 6 92659371 92660486 - Gm44278 lincRNA lincRNA MGP_LPJ_T0015485.1 MGP_LPJ_G0013576.1 mouse_genomes_project 6 111234567 111234972 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015453.1 MGP_LPJ_G0013544.1 mouse_genomes_project 6 96222025 96222244 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018251.1 MGP_LPJ_G0015561.1 mouse_genomes_project 6 119009218 119011446 - Gm44957 processed_transcript retained_intron MGP_LPJ_T0018252.1 MGP_LPJ_G0015561.1 mouse_genomes_project 6 119009233 119011933 - Gm44957 processed_transcript bidirectional_promoter_lncRNA MGP_LPJ_T0005097.1 MGP_LPJ_G0004348.1 mouse_genomes_project 6 123396463 123399119 + antisense antisense MGP_LPJ_T0000188.1 MGP_LPJ_G0000139.1 mouse_genomes_project 6 68846299 68846846 - MGP_LPJ_P0000188 Igkv4-91 IG_V_gene IG_V_gene MGP_LPJ_T0080720.1 MGP_LPJ_G0031383.1 mouse_genomes_project 6 150297154 150301819 + MGP_LPJ_P0080720 Lyrm5 protein_coding protein_coding MGP_LPJ_T0080721.1 MGP_LPJ_G0031383.1 mouse_genomes_project 6 150297176 150302566 + MGP_LPJ_P0080721 Lyrm5 protein_coding protein_coding MGP_LPJ_T0080722.1 MGP_LPJ_G0031383.1 mouse_genomes_project 6 150297176 150302969 + MGP_LPJ_P0080722 Lyrm5 protein_coding protein_coding MGP_LPJ_T0080723.1 MGP_LPJ_G0031383.1 mouse_genomes_project 6 150297190 150300994 + Lyrm5 protein_coding processed_transcript MGP_LPJ_T0080724.1 MGP_LPJ_G0031383.1 mouse_genomes_project 6 150297195 150302566 + MGP_LPJ_P0080724 Lyrm5 protein_coding protein_coding MGP_LPJ_T0080725.1 MGP_LPJ_G0031383.1 mouse_genomes_project 6 150297195 150301799 + MGP_LPJ_P0080725 Lyrm5 protein_coding protein_coding MGP_LPJ_T0080726.1 MGP_LPJ_G0031383.1 mouse_genomes_project 6 150297206 150302566 + MGP_LPJ_P0080726 Lyrm5 protein_coding protein_coding MGP_LPJ_T0080727.1 MGP_LPJ_G0031383.1 mouse_genomes_project 6 150297220 150301762 + MGP_LPJ_P0080727 Lyrm5 protein_coding protein_coding MGP_LPJ_T0078075.1 MGP_LPJ_G0030822.1 mouse_genomes_project 6 84149586 84156592 - MGP_LPJ_P0078075 Wdr54 protein_coding protein_coding MGP_LPJ_T0078077.1 MGP_LPJ_G0030822.1 mouse_genomes_project 6 84152926 84156414 - Wdr54 protein_coding retained_intron MGP_LPJ_T0078078.1 MGP_LPJ_G0030822.1 mouse_genomes_project 6 84152930 84156559 - Wdr54 protein_coding retained_intron MGP_LPJ_T0078079.1 MGP_LPJ_G0030822.1 mouse_genomes_project 6 84153502 84156459 - Wdr54 protein_coding processed_transcript MGP_LPJ_T0078080.1 MGP_LPJ_G0030822.1 mouse_genomes_project 6 84154744 84156592 - MGP_LPJ_P0078080 Wdr54 protein_coding protein_coding MGP_LPJ_T0078081.1 MGP_LPJ_G0030822.1 mouse_genomes_project 6 84155402 84156574 - Wdr54 protein_coding processed_transcript MGP_LPJ_T0008567.1 MGP_LPJ_G0006932.1 mouse_genomes_project 6 30245271 30246355 + Gm13850 lincRNA lincRNA MGP_LPJ_T0002190.1 MGP_LPJ_G0002099.1 mouse_genomes_project 6 141606949 141607756 + TEC TEC MGP_LPJ_T0015366.1 MGP_LPJ_G0013457.1 mouse_genomes_project 6 67374024 67374361 - processed_pseudogene processed_pseudogene MGP_LPJ_T0078899.1 MGP_LPJ_G0030984.1 mouse_genomes_project 6 102276492 102339493 - MGP_LPJ_P0078899 Rybp protein_coding protein_coding MGP_LPJ_T0078900.1 MGP_LPJ_G0030984.1 mouse_genomes_project 6 102280497 102281618 - Rybp protein_coding retained_intron MGP_LPJ_T0078901.1 MGP_LPJ_G0030984.1 mouse_genomes_project 6 102281580 102338720 - Rybp protein_coding retained_intron MGP_LPJ_T0008745.1 MGP_LPJ_G0007070.1 mouse_genomes_project 6 130899530 130910688 - Gm38404 lincRNA lincRNA MGP_LPJ_T0076055.1 MGP_LPJ_G0030352.1 mouse_genomes_project 6 5095654 5122739 + MGP_LPJ_P0076055 Mios protein_coding protein_coding MGP_LPJ_T0076056.1 MGP_LPJ_G0030352.1 mouse_genomes_project 6 5113068 5122733 + Mios protein_coding retained_intron MGP_LPJ_T0076057.1 MGP_LPJ_G0030352.1 mouse_genomes_project 6 5115938 5122733 + Mios protein_coding retained_intron MGP_LPJ_T0076832.1 MGP_LPJ_G0030497.1 mouse_genomes_project 6 37248863 37330074 + MGP_LPJ_P0076832 Tbxas1 protein_coding protein_coding MGP_LPJ_T0076833.1 MGP_LPJ_G0030497.1 mouse_genomes_project 6 37296237 37465396 + MGP_LPJ_P0076833 Tbxas1 protein_coding protein_coding MGP_LPJ_T0076834.1 MGP_LPJ_G0030497.1 mouse_genomes_project 6 37296262 37409054 + Tbxas1 protein_coding retained_intron MGP_LPJ_T0076835.1 MGP_LPJ_G0030497.1 mouse_genomes_project 6 37296281 37465396 + Tbxas1 protein_coding retained_intron MGP_LPJ_T0076836.1 MGP_LPJ_G0030497.1 mouse_genomes_project 6 37318505 37379877 + MGP_LPJ_P0076836 Tbxas1 protein_coding protein_coding MGP_LPJ_T0076837.1 MGP_LPJ_G0030497.1 mouse_genomes_project 6 37348955 37362091 + Tbxas1 protein_coding processed_transcript MGP_LPJ_T0076838.1 MGP_LPJ_G0030497.1 mouse_genomes_project 6 37361874 37454022 + Tbxas1 protein_coding retained_intron MGP_LPJ_T0100918.1 MGP_LPJ_G0039181.1 mouse_genomes_project 6 118468268 118468408 - Snora7a snoRNA snoRNA MGP_LPJ_T0011677.1 MGP_LPJ_G0009795.1 mouse_genomes_project 6 110789213 110789567 + Gm27813 misc_RNA misc_RNA MGP_LPJ_T0015546.1 MGP_LPJ_G0013637.1 mouse_genomes_project 6 127711155 127712089 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015418.1 MGP_LPJ_G0013509.1 mouse_genomes_project 6 84626435 84627333 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002597.1 MGP_LPJ_G0002494.1 mouse_genomes_project 6 40060534 40060583 + MGP_LPJ_P0002597 Trbj2-5 TR_J_gene TR_J_gene MGP_LPJ_T0011688.1 MGP_LPJ_G0009806.1 mouse_genomes_project 6 147158471 147158760 - Gm25430 misc_RNA misc_RNA MGP_LPJ_T0001934.1 MGP_LPJ_G0001844.1 mouse_genomes_project 6 16969 19083 - TEC TEC MGP_LPJ_T0010828.1 MGP_LPJ_G0008946.1 mouse_genomes_project 6 126144865 126144926 + Mir7231 miRNA miRNA MGP_LPJ_T0002209.1 MGP_LPJ_G0002118.1 mouse_genomes_project 6 151958142 151959069 - TEC TEC MGP_LPJ_T0008592.1 MGP_LPJ_G0006946.1 mouse_genomes_project 6 46345403 46350442 + Gm26625 lincRNA lincRNA MGP_LPJ_T0008642.1 MGP_LPJ_G0006986.1 mouse_genomes_project 6 71755074 71775321 + Gm44174 lincRNA lincRNA MGP_LPJ_T0079635.1 MGP_LPJ_G0031115.1 mouse_genomes_project 6 124279262 124301481 + MGP_LPJ_P0079635 Slc6a12 protein_coding protein_coding MGP_LPJ_T0079636.1 MGP_LPJ_G0031115.1 mouse_genomes_project 6 124279585 124283794 + MGP_LPJ_P0079636 Slc6a12 protein_coding protein_coding MGP_LPJ_T0079637.1 MGP_LPJ_G0031115.1 mouse_genomes_project 6 124282804 124301884 + MGP_LPJ_P0079637 Slc6a12 protein_coding protein_coding MGP_LPJ_T0079638.1 MGP_LPJ_G0031115.1 mouse_genomes_project 6 124283605 124291509 + MGP_LPJ_P0079638 Slc6a12 protein_coding nonsense_mediated_decay MGP_LPJ_T0079639.1 MGP_LPJ_G0031115.1 mouse_genomes_project 6 124283605 124301481 + MGP_LPJ_P0079639 Slc6a12 protein_coding protein_coding MGP_LPJ_T0079640.1 MGP_LPJ_G0031115.1 mouse_genomes_project 6 124293002 124298057 + Slc6a12 protein_coding retained_intron MGP_LPJ_T0079641.1 MGP_LPJ_G0031115.1 mouse_genomes_project 6 124293015 124299473 + Slc6a12 protein_coding retained_intron MGP_LPJ_T0079642.1 MGP_LPJ_G0031115.1 mouse_genomes_project 6 124293100 124301481 + MGP_LPJ_P0079642 Slc6a12 protein_coding nonsense_mediated_decay MGP_LPJ_T0079643.1 MGP_LPJ_G0031115.1 mouse_genomes_project 6 124293100 124301481 + MGP_LPJ_P0079643 Slc6a12 protein_coding nonsense_mediated_decay MGP_LPJ_T0079644.1 MGP_LPJ_G0031115.1 mouse_genomes_project 6 124295131 124300003 + Slc6a12 protein_coding retained_intron MGP_LPJ_T0008688.1 MGP_LPJ_G0007021.1 mouse_genomes_project 6 91968403 91970161 - Gm44117 lincRNA lincRNA MGP_LPJ_T0002189.1 MGP_LPJ_G0002098.1 mouse_genomes_project 6 141453127 141453635 - TEC TEC MGP_LPJ_T0000317.1 MGP_LPJ_G0000255.1 mouse_genomes_project 6 67883291 67883758 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0079477.1 MGP_LPJ_G0031090.1 mouse_genomes_project 6 122117461 122133111 - MGP_LPJ_P0079477 Lrtm2 protein_coding protein_coding MGP_LPJ_T0079478.1 MGP_LPJ_G0031090.1 mouse_genomes_project 6 122117461 122131550 - MGP_LPJ_P0079478 Lrtm2 protein_coding protein_coding MGP_LPJ_T0079479.1 MGP_LPJ_G0031090.1 mouse_genomes_project 6 122117461 122133102 - MGP_LPJ_P0079479 Lrtm2 protein_coding protein_coding MGP_LPJ_T0079480.1 MGP_LPJ_G0031090.1 mouse_genomes_project 6 122125992 122131550 - MGP_LPJ_P0079480 Lrtm2 protein_coding protein_coding MGP_LPJ_T0015205.1 MGP_LPJ_G0013296.1 mouse_genomes_project 6 10496864 10497360 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102219.1 MGP_LPJ_G0040256.1 mouse_genomes_project 6 41252866 41252930 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0099662.1 MGP_LPJ_G0037925.1 mouse_genomes_project 6 96874699 96874806 - Gm26501 snRNA snRNA MGP_LPJ_T0004945.1 MGP_LPJ_G0004245.1 mouse_genomes_project 6 28770808 28771704 - Gm44296 antisense antisense MGP_LPJ_T0011646.1 MGP_LPJ_G0009764.1 mouse_genomes_project 6 16804416 16804674 - Gm24213 misc_RNA misc_RNA MGP_LPJ_T0015203.1 MGP_LPJ_G0013294.1 mouse_genomes_project 6 9871645 9872631 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008685.1 MGP_LPJ_G0007020.1 mouse_genomes_project 6 90750383 90766203 - Gm44205 lincRNA lincRNA MGP_LPJ_T0008686.1 MGP_LPJ_G0007020.1 mouse_genomes_project 6 90750389 90754077 - Gm44205 lincRNA lincRNA MGP_LPJ_T0008687.1 MGP_LPJ_G0007020.1 mouse_genomes_project 6 90765128 90766172 - Gm44205 lincRNA lincRNA MGP_LPJ_T0079370.1 MGP_LPJ_G0031070.1 mouse_genomes_project 6 119290364 119291458 - MGP_LPJ_P0079370 Olfr215 protein_coding protein_coding MGP_LPJ_T0015557.1 MGP_LPJ_G0013648.1 mouse_genomes_project 6 130782359 130782669 - processed_pseudogene processed_pseudogene MGP_LPJ_T0078096.1 MGP_LPJ_G0030825.1 mouse_genomes_project 6 84232980 84315498 + MGP_LPJ_P0078096 Slc4a5 protein_coding protein_coding MGP_LPJ_T0078097.1 MGP_LPJ_G0030825.1 mouse_genomes_project 6 84245446 84272170 + Slc4a5 protein_coding processed_transcript MGP_LPJ_T0078098.1 MGP_LPJ_G0030825.1 mouse_genomes_project 6 84289022 84300089 + Slc4a5 protein_coding processed_transcript MGP_LPJ_T0078099.1 MGP_LPJ_G0030825.1 mouse_genomes_project 6 84299268 84308750 + Slc4a5 protein_coding processed_transcript MGP_LPJ_T0002084.1 MGP_LPJ_G0001994.1 mouse_genomes_project 6 88607662 88611005 - TEC TEC MGP_LPJ_T0015456.1 MGP_LPJ_G0013547.1 mouse_genomes_project 6 97032978 97033329 - processed_pseudogene processed_pseudogene MGP_LPJ_T0076551.1 MGP_LPJ_G0030443.1 mouse_genomes_project 6 28536275 28546678 + MGP_LPJ_P0076551 Ssmem1 protein_coding protein_coding MGP_LPJ_T0076552.1 MGP_LPJ_G0030443.1 mouse_genomes_project 6 28538712 28546679 + MGP_LPJ_P0076552 Ssmem1 protein_coding protein_coding MGP_LPJ_T0076553.1 MGP_LPJ_G0030443.1 mouse_genomes_project 6 28540124 28545969 + MGP_LPJ_P0076553 Ssmem1 protein_coding protein_coding MGP_LPJ_T0015427.1 MGP_LPJ_G0013518.1 mouse_genomes_project 6 86206495 86207252 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000237.1 MGP_LPJ_G0000178.1 mouse_genomes_project 6 70491140 70491686 - MGP_LPJ_P0000237 IG_V_gene IG_V_gene MGP_LPJ_T0018213.1 MGP_LPJ_G0015548.1 mouse_genomes_project 6 53264402 53302551 + 4921529L05Rik processed_transcript processed_transcript MGP_LPJ_T0018214.1 MGP_LPJ_G0015548.1 mouse_genomes_project 6 53264412 53267506 + 4921529L05Rik processed_transcript processed_transcript MGP_LPJ_T0018215.1 MGP_LPJ_G0015548.1 mouse_genomes_project 6 53264440 53295726 + 4921529L05Rik processed_transcript processed_transcript MGP_LPJ_T0018216.1 MGP_LPJ_G0015548.1 mouse_genomes_project 6 53295651 53303196 + 4921529L05Rik processed_transcript processed_transcript MGP_LPJ_T0098430.1 MGP_LPJ_G0036711.1 mouse_genomes_project 6 143970357 143970524 - Gm25434 scaRNA scaRNA MGP_LPJ_T0078149.1 MGP_LPJ_G0030836.1 mouse_genomes_project 6 84774789 84795566 + MGP_LPJ_P0078149 Atp6v1b1 protein_coding protein_coding MGP_LPJ_T0078150.1 MGP_LPJ_G0030836.1 mouse_genomes_project 6 84774848 84784938 + Atp6v1b1 protein_coding processed_transcript MGP_LPJ_T0078151.1 MGP_LPJ_G0030836.1 mouse_genomes_project 6 84774863 84785466 + MGP_LPJ_P0078151 Atp6v1b1 protein_coding protein_coding MGP_LPJ_T0078152.1 MGP_LPJ_G0030836.1 mouse_genomes_project 6 84774893 84790345 + MGP_LPJ_P0078152 Atp6v1b1 protein_coding protein_coding MGP_LPJ_T0078153.1 MGP_LPJ_G0030836.1 mouse_genomes_project 6 84785993 84788021 + Atp6v1b1 protein_coding retained_intron MGP_LPJ_T0078154.1 MGP_LPJ_G0030836.1 mouse_genomes_project 6 84793849 84794943 + Atp6v1b1 protein_coding retained_intron MGP_LPJ_T0005049.1 MGP_LPJ_G0004315.1 mouse_genomes_project 6 89643617 89646694 - 1700031F10Rik antisense antisense MGP_LPJ_T0005050.1 MGP_LPJ_G0004315.1 mouse_genomes_project 6 89643619 89644655 - 1700031F10Rik antisense antisense MGP_LPJ_T0080408.1 MGP_LPJ_G0031325.1 mouse_genomes_project 6 140161569 140641869 - MGP_LPJ_P0080408 Grin2b protein_coding protein_coding MGP_LPJ_T0080409.1 MGP_LPJ_G0031325.1 mouse_genomes_project 6 140177923 140641847 - MGP_LPJ_P0080409 Grin2b protein_coding protein_coding MGP_LPJ_T0080410.1 MGP_LPJ_G0031325.1 mouse_genomes_project 6 140322408 140641847 - MGP_LPJ_P0080410 Grin2b protein_coding protein_coding MGP_LPJ_T0080411.1 MGP_LPJ_G0031325.1 mouse_genomes_project 6 140507958 140640631 - MGP_LPJ_P0080411 Grin2b protein_coding protein_coding MGP_LPJ_T0080412.1 MGP_LPJ_G0031325.1 mouse_genomes_project 6 140507961 140641681 - MGP_LPJ_P0080412 Grin2b protein_coding protein_coding MGP_LPJ_T0080413.1 MGP_LPJ_G0031325.1 mouse_genomes_project 6 140640504 140642120 - Grin2b protein_coding processed_transcript MGP_LPJ_T0078286.1 MGP_LPJ_G0030862.1 mouse_genomes_project 6 87136220 87203923 - protein_coding processed_transcript MGP_LPJ_T0078295.1 MGP_LPJ_G0030862.1 mouse_genomes_project 6 87184252 87203861 - MGP_LPJ_P0078295 protein_coding protein_coding MGP_LPJ_T0011659.1 MGP_LPJ_G0009777.1 mouse_genomes_project 6 51466262 51466449 + Gm27492 misc_RNA misc_RNA MGP_LPJ_T0015468.1 MGP_LPJ_G0013559.1 mouse_genomes_project 6 102831297 102831880 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002168.1 MGP_LPJ_G0002077.1 mouse_genomes_project 6 130120922 130121452 - TEC TEC MGP_LPJ_T0076410.1 MGP_LPJ_G0030424.1 mouse_genomes_project 6 27239849 27247443 + Fam71f1 protein_coding processed_transcript MGP_LPJ_T0076411.1 MGP_LPJ_G0030424.1 mouse_genomes_project 6 27239849 27256886 + MGP_LPJ_P0076411 Fam71f1 protein_coding protein_coding MGP_LPJ_T0076412.1 MGP_LPJ_G0030424.1 mouse_genomes_project 6 27239866 27256721 + MGP_LPJ_P0076412 Fam71f1 protein_coding nonsense_mediated_decay MGP_LPJ_T0076413.1 MGP_LPJ_G0030424.1 mouse_genomes_project 6 27239866 27256721 + MGP_LPJ_P0076413 Fam71f1 protein_coding protein_coding MGP_LPJ_T0076414.1 MGP_LPJ_G0030424.1 mouse_genomes_project 6 27239908 27256721 + MGP_LPJ_P0076414 Fam71f1 protein_coding protein_coding MGP_LPJ_T0080449.1 MGP_LPJ_G0031334.1 mouse_genomes_project 6 141453838 141469000 - MGP_LPJ_P0080449 Art4 protein_coding protein_coding MGP_LPJ_T0004953.1 MGP_LPJ_G0004252.1 mouse_genomes_project 6 32940619 32940854 - Npn2 antisense antisense MGP_LPJ_T0004954.1 MGP_LPJ_G0004252.1 mouse_genomes_project 6 32940778 32940853 - Npn2 antisense antisense MGP_LPJ_T0100942.1 MGP_LPJ_G0039205.1 mouse_genomes_project 6 153853981 153854118 - Gm23456 snoRNA snoRNA MGP_LPJ_T0008641.1 MGP_LPJ_G0006985.1 mouse_genomes_project 6 71738505 71739155 - Gm44110 lincRNA lincRNA MGP_LPJ_T0015262.1 MGP_LPJ_G0013353.1 mouse_genomes_project 6 39795388 39795951 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000361.1 MGP_LPJ_G0000299.1 mouse_genomes_project 6 70755561 70755861 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0000199.1 MGP_LPJ_G0000148.1 mouse_genomes_project 6 69637203 69637682 - MGP_LPJ_P0000199 Igkv4-59 IG_V_gene IG_V_gene MGP_LPJ_T0079060.1 MGP_LPJ_G0031015.1 mouse_genomes_project 6 115859551 115878555 + MGP_LPJ_P0079060 Brpf1 protein_coding protein_coding MGP_LPJ_T0079061.1 MGP_LPJ_G0031015.1 mouse_genomes_project 6 115859580 115878400 + MGP_LPJ_P0079061 Brpf1 protein_coding protein_coding MGP_LPJ_T0079062.1 MGP_LPJ_G0031015.1 mouse_genomes_project 6 115859606 115878419 + MGP_LPJ_P0079062 Brpf1 protein_coding protein_coding MGP_LPJ_T0079063.1 MGP_LPJ_G0031015.1 mouse_genomes_project 6 115859606 115878558 + MGP_LPJ_P0079063 Brpf1 protein_coding protein_coding MGP_LPJ_T0079064.1 MGP_LPJ_G0031015.1 mouse_genomes_project 6 115859638 115878539 + MGP_LPJ_P0079064 Brpf1 protein_coding protein_coding MGP_LPJ_T0079065.1 MGP_LPJ_G0031015.1 mouse_genomes_project 6 115859727 115878321 + MGP_LPJ_P0079065 Brpf1 protein_coding protein_coding MGP_LPJ_T0079066.1 MGP_LPJ_G0031015.1 mouse_genomes_project 6 115859843 115878420 + MGP_LPJ_P0079066 Brpf1 protein_coding protein_coding MGP_LPJ_T0079067.1 MGP_LPJ_G0031015.1 mouse_genomes_project 6 115869933 115871229 + Brpf1 protein_coding retained_intron MGP_LPJ_T0079068.1 MGP_LPJ_G0031015.1 mouse_genomes_project 6 115873172 115876004 + Brpf1 protein_coding retained_intron MGP_LPJ_T0079069.1 MGP_LPJ_G0031015.1 mouse_genomes_project 6 115873330 115878400 + Brpf1 protein_coding retained_intron MGP_LPJ_T0000250.1 MGP_LPJ_G0000189.1 mouse_genomes_project 6 70924044 70928480 + MGP_LPJ_P0000250 Igkv3-10 IG_V_gene IG_V_gene MGP_LPJ_T0000251.1 MGP_LPJ_G0000189.1 mouse_genomes_project 6 70924044 70928480 + MGP_LPJ_P0000251 Igkv3-10 IG_V_gene IG_V_gene MGP_LPJ_T0002711.1 MGP_LPJ_G0002590.1 mouse_genomes_project 6 39613764 39614201 + MGP_LPJ_P0002711 Trbv13-2 TR_V_gene TR_V_gene MGP_LPJ_T0015402.1 MGP_LPJ_G0013493.1 mouse_genomes_project 6 76422124 76422523 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002013.1 MGP_LPJ_G0001923.1 mouse_genomes_project 6 51519099 51519827 + TEC TEC MGP_LPJ_T0098294.1 MGP_LPJ_G0036575.1 mouse_genomes_project 6 136886147 136886268 + n-R5s167 rRNA rRNA MGP_LPJ_T0015419.1 MGP_LPJ_G0013510.1 mouse_genomes_project 6 84832406 84832784 - processed_pseudogene processed_pseudogene MGP_LPJ_T0079779.1 MGP_LPJ_G0031157.1 mouse_genomes_project 6 128126982 128174888 + Lpcat3 protein_coding retained_intron MGP_LPJ_T0079780.1 MGP_LPJ_G0031157.1 mouse_genomes_project 6 128126982 128174936 + MGP_LPJ_P0079780 Lpcat3 protein_coding protein_coding MGP_LPJ_T0079781.1 MGP_LPJ_G0031157.1 mouse_genomes_project 6 128127127 128172808 + MGP_LPJ_P0079781 Lpcat3 protein_coding nonsense_mediated_decay MGP_LPJ_T0079782.1 MGP_LPJ_G0031157.1 mouse_genomes_project 6 128127136 128168920 + Lpcat3 protein_coding retained_intron MGP_LPJ_T0079783.1 MGP_LPJ_G0031157.1 mouse_genomes_project 6 128127170 128169979 + Lpcat3 protein_coding retained_intron MGP_LPJ_T0079784.1 MGP_LPJ_G0031157.1 mouse_genomes_project 6 128170837 128173131 + Lpcat3 protein_coding retained_intron MGP_LPJ_T0079785.1 MGP_LPJ_G0031157.1 mouse_genomes_project 6 128172774 128173576 + Lpcat3 protein_coding processed_transcript MGP_LPJ_T0079786.1 MGP_LPJ_G0031157.1 mouse_genomes_project 6 128173272 128174446 + Lpcat3 protein_coding retained_intron MGP_LPJ_T0079787.1 MGP_LPJ_G0031157.1 mouse_genomes_project 6 128173522 128174535 + Lpcat3 protein_coding retained_intron MGP_LPJ_T0002176.1 MGP_LPJ_G0002085.1 mouse_genomes_project 6 132101658 132103540 + TEC TEC MGP_LPJ_T0015554.1 MGP_LPJ_G0013645.1 mouse_genomes_project 6 130575225 130575973 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010781.1 MGP_LPJ_G0008899.1 mouse_genomes_project 6 34702631 34702715 + Mir490 miRNA miRNA MGP_LPJ_T0001981.1 MGP_LPJ_G0001891.1 mouse_genomes_project 6 38473660 38475374 + TEC TEC MGP_LPJ_T0015470.1 MGP_LPJ_G0013561.1 mouse_genomes_project 6 103266094 103266334 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000225.1 MGP_LPJ_G0000169.1 mouse_genomes_project 6 70270424 70271004 - MGP_LPJ_P0000225 Igkv6-32 IG_V_gene IG_V_gene MGP_LPJ_T0080259.1 MGP_LPJ_G0031262.1 mouse_genomes_project 6 133778783 133784883 - protein_coding retained_intron MGP_LPJ_T0005056.1 MGP_LPJ_G0004320.1 mouse_genomes_project 6 90784962 90809424 + Gm26811 antisense antisense MGP_LPJ_T0005145.1 MGP_LPJ_G0004389.1 mouse_genomes_project 6 149766497 149808638 + Sox5os4 antisense antisense MGP_LPJ_T0079412.1 MGP_LPJ_G0031079.1 mouse_genomes_project 6 120686630 120690772 - MGP_LPJ_P0079412 Fxyd4 protein_coding protein_coding MGP_LPJ_T0079413.1 MGP_LPJ_G0031079.1 mouse_genomes_project 6 120686631 120690415 - MGP_LPJ_P0079413 Fxyd4 protein_coding protein_coding MGP_LPJ_T0079414.1 MGP_LPJ_G0031079.1 mouse_genomes_project 6 120686631 120690415 - MGP_LPJ_P0079414 Fxyd4 protein_coding protein_coding MGP_LPJ_T0079415.1 MGP_LPJ_G0031079.1 mouse_genomes_project 6 120686631 120690415 - MGP_LPJ_P0079415 Fxyd4 protein_coding protein_coding MGP_LPJ_T0079416.1 MGP_LPJ_G0031079.1 mouse_genomes_project 6 120686631 120690415 - MGP_LPJ_P0079416 Fxyd4 protein_coding protein_coding MGP_LPJ_T0079417.1 MGP_LPJ_G0031079.1 mouse_genomes_project 6 120686800 120690415 - MGP_LPJ_P0079417 Fxyd4 protein_coding protein_coding MGP_LPJ_T0079418.1 MGP_LPJ_G0031079.1 mouse_genomes_project 6 120687916 120690415 - Fxyd4 protein_coding retained_intron MGP_LPJ_T0079419.1 MGP_LPJ_G0031079.1 mouse_genomes_project 6 120687926 120689033 - Fxyd4 protein_coding retained_intron MGP_LPJ_T0079420.1 MGP_LPJ_G0031079.1 mouse_genomes_project 6 120687928 120690415 - Fxyd4 protein_coding retained_intron MGP_LPJ_T0015181.1 MGP_LPJ_G0013272.1 mouse_genomes_project 6 1133742 1134064 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015261.1 MGP_LPJ_G0013352.1 mouse_genomes_project 6 39515313 39515694 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005071.1 MGP_LPJ_G0004330.1 mouse_genomes_project 6 103318359 103334076 + Gm26911 antisense antisense MGP_LPJ_T0005072.1 MGP_LPJ_G0004330.1 mouse_genomes_project 6 103318376 103345053 + Gm26911 antisense antisense MGP_LPJ_T0005073.1 MGP_LPJ_G0004330.1 mouse_genomes_project 6 103318448 103332692 + Gm26911 antisense antisense MGP_LPJ_T0080194.1 MGP_LPJ_G0031239.1 mouse_genomes_project 6 132936964 132945637 - MGP_LPJ_P0080194 Clec2e protein_coding protein_coding MGP_LPJ_T0077720.1 MGP_LPJ_G0030745.1 mouse_genomes_project 6 67380183 67453823 - MGP_LPJ_P0077720 Il23r protein_coding protein_coding MGP_LPJ_T0079155.1 MGP_LPJ_G0031033.1 mouse_genomes_project 6 116202660 116264060 + MGP_LPJ_P0079155 Irak2 protein_coding protein_coding MGP_LPJ_T0079156.1 MGP_LPJ_G0031033.1 mouse_genomes_project 6 116202681 116259274 + MGP_LPJ_P0079156 Irak2 protein_coding protein_coding MGP_LPJ_T0079157.1 MGP_LPJ_G0031033.1 mouse_genomes_project 6 116202694 116231928 + Irak2 protein_coding retained_intron MGP_LPJ_T0079158.1 MGP_LPJ_G0031033.1 mouse_genomes_project 6 116202721 116264043 + MGP_LPJ_P0079158 Irak2 protein_coding protein_coding MGP_LPJ_T0079159.1 MGP_LPJ_G0031033.1 mouse_genomes_project 6 116202729 116238949 + MGP_LPJ_P0079159 Irak2 protein_coding nonsense_mediated_decay MGP_LPJ_T0079160.1 MGP_LPJ_G0031033.1 mouse_genomes_project 6 116202741 116262063 + MGP_LPJ_P0079160 Irak2 protein_coding unknown_likely_coding MGP_LPJ_T0079161.1 MGP_LPJ_G0031033.1 mouse_genomes_project 6 116234765 116238855 + Irak2 protein_coding processed_transcript MGP_LPJ_T0079162.1 MGP_LPJ_G0031033.1 mouse_genomes_project 6 116235693 116259274 + Irak2 protein_coding retained_intron MGP_LPJ_T0079163.1 MGP_LPJ_G0031033.1 mouse_genomes_project 6 116256224 116259389 + Irak2 protein_coding retained_intron MGP_LPJ_T0079164.1 MGP_LPJ_G0031033.1 mouse_genomes_project 6 116258238 116259470 + Irak2 protein_coding processed_transcript MGP_LPJ_T0015335.1 MGP_LPJ_G0013426.1 mouse_genomes_project 6 64750774 64751444 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102232.1 MGP_LPJ_G0040269.1 mouse_genomes_project 6 57590564 57590669 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0005136.1 MGP_LPJ_G0004381.1 mouse_genomes_project 6 143157941 143178505 + Gm30332 antisense antisense MGP_LPJ_T0015194.1 MGP_LPJ_G0013285.1 mouse_genomes_project 6 5272508 5274302 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015207.1 MGP_LPJ_G0013298.1 mouse_genomes_project 6 11062992 11063340 + processed_pseudogene processed_pseudogene MGP_LPJ_T0076910.1 MGP_LPJ_G0030513.1 mouse_genomes_project 6 38937576 38950914 + MGP_LPJ_P0076910 Ssbp1 protein_coding protein_coding MGP_LPJ_T0076911.1 MGP_LPJ_G0030513.1 mouse_genomes_project 6 38937639 38944812 + MGP_LPJ_P0076911 Ssbp1 protein_coding protein_coding MGP_LPJ_T0076912.1 MGP_LPJ_G0030513.1 mouse_genomes_project 6 38937677 38940514 + Ssbp1 protein_coding retained_intron MGP_LPJ_T0076913.1 MGP_LPJ_G0030513.1 mouse_genomes_project 6 38937692 38947209 + MGP_LPJ_P0076913 Ssbp1 protein_coding protein_coding MGP_LPJ_T0076914.1 MGP_LPJ_G0030513.1 mouse_genomes_project 6 38937699 38947206 + MGP_LPJ_P0076914 Ssbp1 protein_coding protein_coding MGP_LPJ_T0076915.1 MGP_LPJ_G0030513.1 mouse_genomes_project 6 38937750 38942736 + MGP_LPJ_P0076915 Ssbp1 protein_coding protein_coding MGP_LPJ_T0076916.1 MGP_LPJ_G0030513.1 mouse_genomes_project 6 38942703 38943675 + Ssbp1 protein_coding retained_intron MGP_LPJ_T0002136.1 MGP_LPJ_G0002046.1 mouse_genomes_project 6 103680252 103682357 + TEC TEC MGP_LPJ_T0015386.1 MGP_LPJ_G0013477.1 mouse_genomes_project 6 70699182 70700528 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100906.1 MGP_LPJ_G0039169.1 mouse_genomes_project 6 84879801 84879931 - Gm23014 snoRNA snoRNA MGP_LPJ_T0077821.1 MGP_LPJ_G0030767.1 mouse_genomes_project 6 72649131 72680364 - MGP_LPJ_P0077821 Atoh8 protein_coding nonsense_mediated_decay MGP_LPJ_T0077822.1 MGP_LPJ_G0030767.1 mouse_genomes_project 6 72649131 72681404 - MGP_LPJ_P0077822 Atoh8 protein_coding protein_coding MGP_LPJ_T0077823.1 MGP_LPJ_G0030767.1 mouse_genomes_project 6 72668458 72681057 - Atoh8 protein_coding processed_transcript MGP_LPJ_T0102247.1 MGP_LPJ_G0040284.1 mouse_genomes_project 6 87451546 87452589 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0004943.1 MGP_LPJ_G0004243.1 mouse_genomes_project 6 28601908 28604791 - Gm13781 antisense antisense MGP_LPJ_T0000329.1 MGP_LPJ_G0000267.1 mouse_genomes_project 6 68379938 68380733 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0080335.1 MGP_LPJ_G0031309.1 mouse_genomes_project 6 138817365 138951873 - MGP_LPJ_P0080335 Lrp6 protein_coding protein_coding MGP_LPJ_T0080336.1 MGP_LPJ_G0031309.1 mouse_genomes_project 6 138821372 138851431 - Lrp6 protein_coding retained_intron MGP_LPJ_T0080337.1 MGP_LPJ_G0031309.1 mouse_genomes_project 6 138832652 138845146 - Lrp6 protein_coding retained_intron MGP_LPJ_T0080338.1 MGP_LPJ_G0031309.1 mouse_genomes_project 6 138833287 138847899 - Lrp6 protein_coding retained_intron MGP_LPJ_T0080339.1 MGP_LPJ_G0031309.1 mouse_genomes_project 6 138890579 138951925 - MGP_LPJ_P0080339 Lrp6 protein_coding protein_coding MGP_LPJ_T0080340.1 MGP_LPJ_G0031309.1 mouse_genomes_project 6 138920906 138921847 - Lrp6 protein_coding retained_intron MGP_LPJ_T0011685.1 MGP_LPJ_G0009803.1 mouse_genomes_project 6 145369890 145370143 + Gm25780 misc_RNA misc_RNA MGP_LPJ_T0002064.1 MGP_LPJ_G0001974.1 mouse_genomes_project 6 82844640 82846864 - TEC TEC MGP_LPJ_T0078230.1 MGP_LPJ_G0030847.1 mouse_genomes_project 6 86327965 86345224 + MGP_LPJ_P0078230 Emx1 protein_coding protein_coding MGP_LPJ_T0078231.1 MGP_LPJ_G0030847.1 mouse_genomes_project 6 86334387 86345328 + Emx1 protein_coding retained_intron MGP_LPJ_T0076306.1 MGP_LPJ_G0030397.1 mouse_genomes_project 6 21781550 21864620 - MGP_LPJ_P0076306 Slc13a1 protein_coding protein_coding MGP_LPJ_T0076307.1 MGP_LPJ_G0030397.1 mouse_genomes_project 6 21781817 21803306 - Slc13a1 protein_coding processed_transcript MGP_LPJ_T0076308.1 MGP_LPJ_G0030397.1 mouse_genomes_project 6 21782232 21864592 - MGP_LPJ_P0076308 Slc13a1 protein_coding unknown_likely_coding MGP_LPJ_T0076309.1 MGP_LPJ_G0030397.1 mouse_genomes_project 6 21800021 21803303 - Slc13a1 protein_coding retained_intron MGP_LPJ_T0076310.1 MGP_LPJ_G0030397.1 mouse_genomes_project 6 21829604 21864618 - Slc13a1 protein_coding retained_intron MGP_LPJ_T0077807.1 MGP_LPJ_G0030765.1 mouse_genomes_project 6 72336856 72389581 + MGP_LPJ_P0077807 Polr1a protein_coding nonsense_mediated_decay MGP_LPJ_T0077808.1 MGP_LPJ_G0030765.1 mouse_genomes_project 6 72336864 72412512 + MGP_LPJ_P0077808 Polr1a protein_coding protein_coding MGP_LPJ_T0077809.1 MGP_LPJ_G0030765.1 mouse_genomes_project 6 72336872 72350351 + Polr1a protein_coding retained_intron MGP_LPJ_T0077810.1 MGP_LPJ_G0030765.1 mouse_genomes_project 6 72340207 72389466 + Polr1a protein_coding retained_intron MGP_LPJ_T0077811.1 MGP_LPJ_G0030765.1 mouse_genomes_project 6 72354990 72355608 + Polr1a protein_coding retained_intron MGP_LPJ_T0077812.1 MGP_LPJ_G0030765.1 mouse_genomes_project 6 72360077 72360669 + Polr1a protein_coding retained_intron MGP_LPJ_T0077813.1 MGP_LPJ_G0030765.1 mouse_genomes_project 6 72364888 72375209 + Polr1a protein_coding processed_transcript MGP_LPJ_T0077814.1 MGP_LPJ_G0030765.1 mouse_genomes_project 6 72382790 72389267 + MGP_LPJ_P0077814 Polr1a protein_coding nonsense_mediated_decay MGP_LPJ_T0077815.1 MGP_LPJ_G0030765.1 mouse_genomes_project 6 72382791 72384185 + Polr1a protein_coding retained_intron MGP_LPJ_T0077816.1 MGP_LPJ_G0030765.1 mouse_genomes_project 6 72391768 72414972 + MGP_LPJ_P0077816 Polr1a protein_coding nonsense_mediated_decay MGP_LPJ_T0008588.1 MGP_LPJ_G0006943.1 mouse_genomes_project 6 37631507 37633935 + Gm43479 lincRNA lincRNA MGP_LPJ_T0010815.1 MGP_LPJ_G0008933.1 mouse_genomes_project 6 110821171 110821232 + Mir7661 miRNA miRNA MGP_LPJ_T0076979.1 MGP_LPJ_G0030546.1 mouse_genomes_project 6 40685838 40686798 + MGP_LPJ_P0076979 Tas2r144 protein_coding protein_coding MGP_LPJ_T0011669.1 MGP_LPJ_G0009787.1 mouse_genomes_project 6 84617285 84617608 - Gm24990 misc_RNA misc_RNA MGP_LPJ_T0018204.1 MGP_LPJ_G0015546.1 mouse_genomes_project 6 51385850 51389626 + Hoxaas2 processed_transcript antisense MGP_LPJ_T0018205.1 MGP_LPJ_G0015546.1 mouse_genomes_project 6 51386692 51389739 + Hoxaas2 processed_transcript retained_intron MGP_LPJ_T0018206.1 MGP_LPJ_G0015546.1 mouse_genomes_project 6 51388684 51389739 + Hoxaas2 processed_transcript processed_transcript MGP_LPJ_T0008603.1 MGP_LPJ_G0006955.1 mouse_genomes_project 6 49907659 49911622 - Gm44109 lincRNA lincRNA MGP_LPJ_T0076655.1 MGP_LPJ_G0030462.1 mouse_genomes_project 6 32553638 32568606 + MGP_LPJ_P0076655 Akr1b8 protein_coding protein_coding MGP_LPJ_T0076656.1 MGP_LPJ_G0030462.1 mouse_genomes_project 6 32555634 32565382 + Akr1b8 protein_coding processed_transcript MGP_LPJ_T0011676.1 MGP_LPJ_G0009794.1 mouse_genomes_project 6 101909377 101909699 - Gm24248 misc_RNA misc_RNA MGP_LPJ_T0004979.1 MGP_LPJ_G0004272.1 mouse_genomes_project 6 51395378 51412864 + Hoxaas3 antisense antisense MGP_LPJ_T0004980.1 MGP_LPJ_G0004272.1 mouse_genomes_project 6 51395396 51434967 + Hoxaas3 antisense antisense MGP_LPJ_T0004983.1 MGP_LPJ_G0004272.1 mouse_genomes_project 6 51421025 51433506 + Hoxaas3 antisense antisense MGP_LPJ_T0080044.1 MGP_LPJ_G0031200.1 mouse_genomes_project 6 129649403 129715418 - MGP_LPJ_P0080044 Ntf3 protein_coding protein_coding MGP_LPJ_T0080045.1 MGP_LPJ_G0031200.1 mouse_genomes_project 6 129649403 129713663 - MGP_LPJ_P0080045 Ntf3 protein_coding protein_coding MGP_LPJ_T0080046.1 MGP_LPJ_G0031200.1 mouse_genomes_project 6 129649403 129715613 - MGP_LPJ_P0080046 Ntf3 protein_coding protein_coding MGP_LPJ_T0080009.1 MGP_LPJ_G0031193.1 mouse_genomes_project 6 128812996 128821126 - MGP_LPJ_P0080009 Ltbr protein_coding protein_coding MGP_LPJ_T0080010.1 MGP_LPJ_G0031193.1 mouse_genomes_project 6 128816344 128816798 - Ltbr protein_coding retained_intron MGP_LPJ_T0080011.1 MGP_LPJ_G0031193.1 mouse_genomes_project 6 128819973 128820506 - Ltbr protein_coding retained_intron MGP_LPJ_T0015325.1 MGP_LPJ_G0013416.1 mouse_genomes_project 6 60720154 60721040 - processed_pseudogene processed_pseudogene MGP_LPJ_T0077005.1 MGP_LPJ_G0030551.1 mouse_genomes_project 6 40790823 40800152 - MGP_LPJ_P0077005 Fam131b protein_coding protein_coding MGP_LPJ_T0077006.1 MGP_LPJ_G0030551.1 mouse_genomes_project 6 40793670 40799981 - MGP_LPJ_P0077006 Fam131b protein_coding protein_coding MGP_LPJ_T0102214.1 MGP_LPJ_G0040251.1 mouse_genomes_project 6 39898592 39898945 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0078518.1 MGP_LPJ_G0030906.1 mouse_genomes_project 6 89902108 89933700 + MGP_LPJ_P0078518 Ruvbl1 protein_coding protein_coding MGP_LPJ_T0078519.1 MGP_LPJ_G0030906.1 mouse_genomes_project 6 89902426 89919211 + MGP_LPJ_P0078519 Ruvbl1 protein_coding protein_coding MGP_LPJ_T0076385.1 MGP_LPJ_G0030418.1 mouse_genomes_project 6 26960620 26974251 + MGP_LPJ_P0076385 Lep protein_coding protein_coding MGP_LPJ_T0076386.1 MGP_LPJ_G0030418.1 mouse_genomes_project 6 26965853 26971363 + MGP_LPJ_P0076386 Lep protein_coding protein_coding MGP_LPJ_T0015272.1 MGP_LPJ_G0013363.1 mouse_genomes_project 6 43359850 43359995 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000184.1 MGP_LPJ_G0000136.1 mouse_genomes_project 6 68749650 68749937 + MGP_LPJ_P0000184 IG_V_gene IG_V_gene MGP_LPJ_T0018257.1 MGP_LPJ_G0015564.1 mouse_genomes_project 6 128527017 128538740 + Gm44597 processed_transcript retained_intron MGP_LPJ_T0018258.1 MGP_LPJ_G0015564.1 mouse_genomes_project 6 128527046 128538695 + Gm44597 processed_transcript retained_intron MGP_LPJ_T0015449.1 MGP_LPJ_G0013540.1 mouse_genomes_project 6 95329428 95330301 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015268.1 MGP_LPJ_G0013359.1 mouse_genomes_project 6 41783431 41783854 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015255.1 MGP_LPJ_G0013346.1 mouse_genomes_project 6 36742523 36742946 + processed_pseudogene processed_pseudogene MGP_LPJ_T0077659.1 MGP_LPJ_G0030731.1 mouse_genomes_project 6 64994161 65021678 - MGP_LPJ_P0077659 Hpgds protein_coding protein_coding MGP_LPJ_T0077660.1 MGP_LPJ_G0030731.1 mouse_genomes_project 6 64995905 64999832 - Hpgds protein_coding retained_intron MGP_LPJ_T0077661.1 MGP_LPJ_G0030731.1 mouse_genomes_project 6 65008882 65015174 - Hpgds protein_coding retained_intron MGP_LPJ_T0005106.1 MGP_LPJ_G0004357.1 mouse_genomes_project 6 128496179 128537048 - Gm43989 antisense antisense MGP_LPJ_T0079650.1 MGP_LPJ_G0031117.1 mouse_genomes_project 6 124574627 124580524 + MGP_LPJ_P0079650 A2m protein_coding protein_coding MGP_LPJ_T0079651.1 MGP_LPJ_G0031117.1 mouse_genomes_project 6 124575479 124617169 + MGP_LPJ_P0079651 A2m protein_coding protein_coding MGP_LPJ_T0079652.1 MGP_LPJ_G0031117.1 mouse_genomes_project 6 124596780 124599359 + A2m protein_coding retained_intron MGP_LPJ_T0015307.1 MGP_LPJ_G0013398.1 mouse_genomes_project 6 52096093 52096686 - processed_pseudogene processed_pseudogene MGP_LPJ_T0078280.1 MGP_LPJ_G0030858.1 mouse_genomes_project 6 86996237 87001055 - MGP_LPJ_P0078280 protein_coding protein_coding MGP_LPJ_T0078281.1 MGP_LPJ_G0030858.1 mouse_genomes_project 6 86996267 86998068 - MGP_LPJ_P0078281 protein_coding protein_coding MGP_LPJ_T0078895.1 MGP_LPJ_G0030983.1 mouse_genomes_project 6 101719594 101735899 - MGP_LPJ_P0078895 Prok2 protein_coding protein_coding MGP_LPJ_T0078896.1 MGP_LPJ_G0030983.1 mouse_genomes_project 6 101719645 101735860 - MGP_LPJ_P0078896 Prok2 protein_coding protein_coding MGP_LPJ_T0078897.1 MGP_LPJ_G0030983.1 mouse_genomes_project 6 101720315 101735890 - MGP_LPJ_P0078897 Prok2 protein_coding protein_coding MGP_LPJ_T0078898.1 MGP_LPJ_G0030983.1 mouse_genomes_project 6 101731611 101735899 - MGP_LPJ_P0078898 Prok2 protein_coding protein_coding MGP_LPJ_T0015569.1 MGP_LPJ_G0013660.1 mouse_genomes_project 6 133440252 133440694 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005150.1 MGP_LPJ_G0004394.1 mouse_genomes_project 6 150550546 150552802 + Gm15499 antisense antisense MGP_LPJ_T0004963.1 MGP_LPJ_G0004260.1 mouse_genomes_project 6 38319987 38320427 - Gm26833 antisense antisense MGP_LPJ_T0015591.1 MGP_LPJ_G0013682.1 mouse_genomes_project 6 136662731 136663201 - processed_pseudogene processed_pseudogene MGP_LPJ_T0078015.1 MGP_LPJ_G0030810.1 mouse_genomes_project 6 84052103 84055391 + MGP_LPJ_P0078015 Aup1 protein_coding protein_coding MGP_LPJ_T0078016.1 MGP_LPJ_G0030810.1 mouse_genomes_project 6 84052228 84055269 + Aup1 protein_coding retained_intron MGP_LPJ_T0078017.1 MGP_LPJ_G0030810.1 mouse_genomes_project 6 84052296 84053968 + Aup1 protein_coding retained_intron MGP_LPJ_T0078018.1 MGP_LPJ_G0030810.1 mouse_genomes_project 6 84052311 84053938 + Aup1 protein_coding retained_intron MGP_LPJ_T0078019.1 MGP_LPJ_G0030810.1 mouse_genomes_project 6 84052313 84052752 + Aup1 protein_coding retained_intron MGP_LPJ_T0078020.1 MGP_LPJ_G0030810.1 mouse_genomes_project 6 84052313 84055261 + MGP_LPJ_P0078020 Aup1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078021.1 MGP_LPJ_G0030810.1 mouse_genomes_project 6 84052318 84054017 + MGP_LPJ_P0078021 Aup1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078022.1 MGP_LPJ_G0030810.1 mouse_genomes_project 6 84052320 84053098 + Aup1 protein_coding retained_intron MGP_LPJ_T0078023.1 MGP_LPJ_G0030810.1 mouse_genomes_project 6 84052330 84055265 + MGP_LPJ_P0078023 Aup1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078024.1 MGP_LPJ_G0030810.1 mouse_genomes_project 6 84052337 84053871 + Aup1 protein_coding retained_intron MGP_LPJ_T0078025.1 MGP_LPJ_G0030810.1 mouse_genomes_project 6 84052973 84053700 + Aup1 protein_coding retained_intron MGP_LPJ_T0078026.1 MGP_LPJ_G0030810.1 mouse_genomes_project 6 84053296 84053896 + Aup1 protein_coding retained_intron MGP_LPJ_T0078027.1 MGP_LPJ_G0030810.1 mouse_genomes_project 6 84053992 84055227 + Aup1 protein_coding retained_intron MGP_LPJ_T0078028.1 MGP_LPJ_G0030810.1 mouse_genomes_project 6 84054094 84054420 + Aup1 protein_coding retained_intron MGP_LPJ_T0078029.1 MGP_LPJ_G0030810.1 mouse_genomes_project 6 84054430 84054976 + Aup1 protein_coding retained_intron MGP_LPJ_T0078030.1 MGP_LPJ_G0030810.1 mouse_genomes_project 6 84054435 84055265 + Aup1 protein_coding retained_intron MGP_LPJ_T0078031.1 MGP_LPJ_G0030810.1 mouse_genomes_project 6 84054803 84055259 + Aup1 protein_coding retained_intron MGP_LPJ_T0005139.1 MGP_LPJ_G0004384.1 mouse_genomes_project 6 147553135 147566469 + 5330439B14Rik antisense antisense MGP_LPJ_T0015342.1 MGP_LPJ_G0013433.1 mouse_genomes_project 6 65097274 65097625 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015218.1 MGP_LPJ_G0013309.1 mouse_genomes_project 6 16557296 16558608 + processed_pseudogene processed_pseudogene MGP_LPJ_T0077131.1 MGP_LPJ_G0030594.1 mouse_genomes_project 6 46873500 46897665 - MGP_LPJ_P0077131 Zfp746 protein_coding protein_coding MGP_LPJ_T0077132.1 MGP_LPJ_G0030594.1 mouse_genomes_project 6 46873500 46897665 - MGP_LPJ_P0077132 Zfp746 protein_coding protein_coding MGP_LPJ_T0077133.1 MGP_LPJ_G0030594.1 mouse_genomes_project 6 46875856 46878466 - MGP_LPJ_P0077133 Zfp746 protein_coding protein_coding MGP_LPJ_T0077134.1 MGP_LPJ_G0030594.1 mouse_genomes_project 6 46877316 46893350 - Zfp746 protein_coding retained_intron MGP_LPJ_T0077135.1 MGP_LPJ_G0030594.1 mouse_genomes_project 6 46892693 46896282 - Zfp746 protein_coding retained_intron MGP_LPJ_T0077136.1 MGP_LPJ_G0030594.1 mouse_genomes_project 6 46896307 46897618 - Zfp746 protein_coding retained_intron MGP_LPJ_T0015326.1 MGP_LPJ_G0013417.1 mouse_genomes_project 6 61137942 61138366 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102282.1 MGP_LPJ_G0040319.1 mouse_genomes_project 6 137659748 137661831 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0005044.1 MGP_LPJ_G0004312.1 mouse_genomes_project 6 89109986 89111171 - Gm44210 antisense antisense MGP_LPJ_T0077450.1 MGP_LPJ_G0030668.1 mouse_genomes_project 6 54138414 54221175 + MGP_LPJ_P0077450 Znrf2 protein_coding protein_coding MGP_LPJ_T0077451.1 MGP_LPJ_G0030668.1 mouse_genomes_project 6 54139911 54206088 + MGP_LPJ_P0077451 Znrf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0077452.1 MGP_LPJ_G0030668.1 mouse_genomes_project 6 54141135 54212786 + MGP_LPJ_P0077452 Znrf2 protein_coding protein_coding MGP_LPJ_T0015259.1 MGP_LPJ_G0013350.1 mouse_genomes_project 6 38990495 38990907 - processed_pseudogene processed_pseudogene MGP_LPJ_T0080037.1 MGP_LPJ_G0031199.1 mouse_genomes_project 6 129215422 129501309 + Ano2 protein_coding retained_intron MGP_LPJ_T0080038.1 MGP_LPJ_G0031199.1 mouse_genomes_project 6 129215422 129579219 + MGP_LPJ_P0080038 Ano2 protein_coding protein_coding MGP_LPJ_T0080039.1 MGP_LPJ_G0031199.1 mouse_genomes_project 6 129215726 129578607 + MGP_LPJ_P0080039 Ano2 protein_coding unknown_likely_coding MGP_LPJ_T0080040.1 MGP_LPJ_G0031199.1 mouse_genomes_project 6 129235983 129579219 + MGP_LPJ_P0080040 Ano2 protein_coding nonsense_mediated_decay MGP_LPJ_T0080041.1 MGP_LPJ_G0031199.1 mouse_genomes_project 6 129236833 129323935 + Ano2 protein_coding processed_transcript MGP_LPJ_T0080042.1 MGP_LPJ_G0031199.1 mouse_genomes_project 6 129349283 129445112 + Ano2 protein_coding processed_transcript MGP_LPJ_T0080043.1 MGP_LPJ_G0031199.1 mouse_genomes_project 6 129349284 129579217 + MGP_LPJ_P0080043 Ano2 protein_coding nonsense_mediated_decay MGP_LPJ_T0079240.1 MGP_LPJ_G0031045.1 mouse_genomes_project 6 117855362 117887984 + MGP_LPJ_P0079240 Gm17482 protein_coding protein_coding MGP_LPJ_T0077393.1 MGP_LPJ_G0030658.1 mouse_genomes_project 6 52550632 52658434 + 9430076C15Rik protein_coding retained_intron MGP_LPJ_T0077394.1 MGP_LPJ_G0030658.1 mouse_genomes_project 6 52550632 52972539 + MGP_LPJ_P0077394 9430076C15Rik protein_coding protein_coding MGP_LPJ_T0077395.1 MGP_LPJ_G0030658.1 mouse_genomes_project 6 52550648 52662640 + 9430076C15Rik protein_coding processed_transcript MGP_LPJ_T0077396.1 MGP_LPJ_G0030658.1 mouse_genomes_project 6 52550657 52665144 + 9430076C15Rik protein_coding processed_transcript MGP_LPJ_T0077397.1 MGP_LPJ_G0030658.1 mouse_genomes_project 6 52550680 52552082 + 9430076C15Rik protein_coding processed_transcript MGP_LPJ_T0077398.1 MGP_LPJ_G0030658.1 mouse_genomes_project 6 52550680 52915758 + 9430076C15Rik protein_coding processed_transcript MGP_LPJ_T0077399.1 MGP_LPJ_G0030658.1 mouse_genomes_project 6 52550680 52655855 + 9430076C15Rik protein_coding processed_transcript MGP_LPJ_T0077400.1 MGP_LPJ_G0030658.1 mouse_genomes_project 6 52550680 52877532 + 9430076C15Rik protein_coding retained_intron MGP_LPJ_T0077401.1 MGP_LPJ_G0030658.1 mouse_genomes_project 6 52550683 52685229 + 9430076C15Rik protein_coding processed_transcript MGP_LPJ_T0077402.1 MGP_LPJ_G0030658.1 mouse_genomes_project 6 52553797 52963863 + MGP_LPJ_P0077402 9430076C15Rik protein_coding protein_coding MGP_LPJ_T0077403.1 MGP_LPJ_G0030658.1 mouse_genomes_project 6 52575218 52963863 + MGP_LPJ_P0077403 9430076C15Rik protein_coding protein_coding MGP_LPJ_T0077404.1 MGP_LPJ_G0030658.1 mouse_genomes_project 6 52838634 52972530 + MGP_LPJ_P0077404 9430076C15Rik protein_coding protein_coding MGP_LPJ_T0077405.1 MGP_LPJ_G0030658.1 mouse_genomes_project 6 52838709 52879023 + 9430076C15Rik protein_coding retained_intron MGP_LPJ_T0077406.1 MGP_LPJ_G0030658.1 mouse_genomes_project 6 52838710 52875878 + MGP_LPJ_P0077406 9430076C15Rik protein_coding protein_coding MGP_LPJ_T0100933.1 MGP_LPJ_G0039196.1 mouse_genomes_project 6 128684421 128684746 - Scarna10 snoRNA snoRNA MGP_LPJ_T0077612.1 MGP_LPJ_G0030722.1 mouse_genomes_project 6 58491724 58584384 - MGP_LPJ_P0077612 Fam13a protein_coding protein_coding MGP_LPJ_T0077613.1 MGP_LPJ_G0030722.1 mouse_genomes_project 6 58495219 58584175 - MGP_LPJ_P0077613 Fam13a protein_coding protein_coding MGP_LPJ_T0077614.1 MGP_LPJ_G0030722.1 mouse_genomes_project 6 58534816 58584257 - Fam13a protein_coding processed_transcript MGP_LPJ_T0077615.1 MGP_LPJ_G0030722.1 mouse_genomes_project 6 58564039 58584339 - Fam13a protein_coding retained_intron MGP_LPJ_T0077616.1 MGP_LPJ_G0030722.1 mouse_genomes_project 6 58579969 58584278 - Fam13a protein_coding retained_intron MGP_LPJ_T0002150.1 MGP_LPJ_G0002060.1 mouse_genomes_project 6 116255334 116255872 + TEC TEC MGP_LPJ_T0079242.1 MGP_LPJ_G0031046.1 mouse_genomes_project 6 117868423 117878746 - MGP_LPJ_P0079242 Timp4 protein_coding protein_coding MGP_LPJ_T0079243.1 MGP_LPJ_G0031046.1 mouse_genomes_project 6 117873380 117878398 - MGP_LPJ_P0079243 Timp4 protein_coding protein_coding MGP_LPJ_T0010817.1 MGP_LPJ_G0008935.1 mouse_genomes_project 6 116085059 116085184 - Gm23365 miRNA miRNA MGP_LPJ_T0102215.1 MGP_LPJ_G0040252.1 mouse_genomes_project 6 40001635 40002847 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008621.1 MGP_LPJ_G0006968.1 mouse_genomes_project 6 53097364 53099541 + Gm16499 lincRNA lincRNA MGP_LPJ_T0008622.1 MGP_LPJ_G0006968.1 mouse_genomes_project 6 53097365 53097431 + Gm16499 lincRNA lincRNA MGP_LPJ_T0015393.1 MGP_LPJ_G0013484.1 mouse_genomes_project 6 72508227 72509329 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098658.1 MGP_LPJ_G0036928.1 mouse_genomes_project 6 128684423 128684704 - Gm28967 sense_intronic sense_intronic MGP_LPJ_T0005655.1 MGP_LPJ_G0004762.1 mouse_genomes_project 6 118326582 118328395 + D830050J10Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_LPJ_T0005656.1 MGP_LPJ_G0004762.1 mouse_genomes_project 6 118326609 118327751 + D830050J10Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_LPJ_T0008790.1 MGP_LPJ_G0007100.1 mouse_genomes_project 6 151134057 151136285 - Gm44269 lincRNA lincRNA MGP_LPJ_T0075946.1 MGP_LPJ_G0030328.1 mouse_genomes_project 6 687249 693326 - MGP_LPJ_P0075946 Tfpi2 protein_coding protein_coding MGP_LPJ_T0075947.1 MGP_LPJ_G0030328.1 mouse_genomes_project 6 688039 715296 - MGP_LPJ_P0075947 Tfpi2 protein_coding protein_coding MGP_LPJ_T0075948.1 MGP_LPJ_G0030328.1 mouse_genomes_project 6 690163 715357 - MGP_LPJ_P0075948 Tfpi2 protein_coding protein_coding MGP_LPJ_T0015488.1 MGP_LPJ_G0013579.1 mouse_genomes_project 6 111732788 111733236 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015632.1 MGP_LPJ_G0013723.1 mouse_genomes_project 6 154330570 154331505 + processed_pseudogene processed_pseudogene MGP_LPJ_T0077055.1 MGP_LPJ_G0030573.1 mouse_genomes_project 6 41666016 41678460 + MGP_LPJ_P0077055 protein_coding protein_coding MGP_LPJ_T0001999.1 MGP_LPJ_G0001909.1 mouse_genomes_project 6 44637418 44639799 + TEC TEC MGP_LPJ_T0076305.1 MGP_LPJ_G0030396.1 mouse_genomes_project 6 21661355 21662255 - MGP_LPJ_P0076305 Tas2r118 protein_coding protein_coding MGP_LPJ_T0100922.1 MGP_LPJ_G0039185.1 mouse_genomes_project 6 126777443 126777575 - Gm22722 snoRNA snoRNA MGP_LPJ_T0080579.1 MGP_LPJ_G0031356.1 mouse_genomes_project 6 146141831 146405919 + MGP_LPJ_P0080579 Pde3a protein_coding protein_coding MGP_LPJ_T0080580.1 MGP_LPJ_G0031356.1 mouse_genomes_project 6 146142528 146363770 + Pde3a protein_coding retained_intron MGP_LPJ_T0102259.1 MGP_LPJ_G0040296.1 mouse_genomes_project 6 127558241 127559145 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0078497.1 MGP_LPJ_G0030901.1 mouse_genomes_project 6 89396540 89453543 - MGP_LPJ_P0078497 Rab7 protein_coding protein_coding MGP_LPJ_T0078498.1 MGP_LPJ_G0030901.1 mouse_genomes_project 6 89396979 89453649 - MGP_LPJ_P0078498 Rab7 protein_coding protein_coding MGP_LPJ_T0078499.1 MGP_LPJ_G0030901.1 mouse_genomes_project 6 89401640 89453576 - MGP_LPJ_P0078499 Rab7 protein_coding protein_coding MGP_LPJ_T0076311.1 MGP_LPJ_G0030398.1 mouse_genomes_project 6 22170392 22240290 - MGP_LPJ_P0076311 Iqub protein_coding protein_coding MGP_LPJ_T0008695.1 MGP_LPJ_G0007027.1 mouse_genomes_project 6 93156504 93162787 + Gm45218 lincRNA lincRNA MGP_LPJ_T0002518.1 MGP_LPJ_G0002423.1 mouse_genomes_project 6 40055279 40056429 + MGP_LPJ_P0002518 Trbc1 TR_C_gene TR_C_gene MGP_LPJ_T0002519.1 MGP_LPJ_G0002423.1 mouse_genomes_project 6 40055279 40056963 + MGP_LPJ_P0002519 Trbc1 TR_C_gene TR_C_gene MGP_LPJ_T0077644.1 MGP_LPJ_G0030730.1 mouse_genomes_project 6 64921340 64935680 + MGP_LPJ_P0077644 Smarcad1 protein_coding protein_coding MGP_LPJ_T0077645.1 MGP_LPJ_G0030730.1 mouse_genomes_project 6 64921366 64992931 + MGP_LPJ_P0077645 Smarcad1 protein_coding protein_coding MGP_LPJ_T0077646.1 MGP_LPJ_G0030730.1 mouse_genomes_project 6 64921378 64922319 + Smarcad1 protein_coding retained_intron MGP_LPJ_T0077647.1 MGP_LPJ_G0030730.1 mouse_genomes_project 6 64921424 64922889 + MGP_LPJ_P0077647 Smarcad1 protein_coding protein_coding MGP_LPJ_T0077648.1 MGP_LPJ_G0030730.1 mouse_genomes_project 6 64921593 64922961 + MGP_LPJ_P0077648 Smarcad1 protein_coding protein_coding MGP_LPJ_T0077649.1 MGP_LPJ_G0030730.1 mouse_genomes_project 6 64921615 64931929 + MGP_LPJ_P0077649 Smarcad1 protein_coding nonsense_mediated_decay MGP_LPJ_T0077650.1 MGP_LPJ_G0030730.1 mouse_genomes_project 6 64921623 64932018 + MGP_LPJ_P0077650 Smarcad1 protein_coding nonsense_mediated_decay MGP_LPJ_T0077651.1 MGP_LPJ_G0030730.1 mouse_genomes_project 6 64921636 64960581 + Smarcad1 protein_coding processed_transcript MGP_LPJ_T0077652.1 MGP_LPJ_G0030730.1 mouse_genomes_project 6 64921970 64992468 + MGP_LPJ_P0077652 Smarcad1 protein_coding nonsense_mediated_decay MGP_LPJ_T0077653.1 MGP_LPJ_G0030730.1 mouse_genomes_project 6 64932051 64946459 + Smarcad1 protein_coding retained_intron MGP_LPJ_T0077654.1 MGP_LPJ_G0030730.1 mouse_genomes_project 6 64936634 64953890 + Smarcad1 protein_coding processed_transcript MGP_LPJ_T0077655.1 MGP_LPJ_G0030730.1 mouse_genomes_project 6 64954055 64974773 + MGP_LPJ_P0077655 Smarcad1 protein_coding nonsense_mediated_decay MGP_LPJ_T0077656.1 MGP_LPJ_G0030730.1 mouse_genomes_project 6 64956395 64959457 + Smarcad1 protein_coding retained_intron MGP_LPJ_T0077657.1 MGP_LPJ_G0030730.1 mouse_genomes_project 6 64976259 64976902 + Smarcad1 protein_coding retained_intron MGP_LPJ_T0077658.1 MGP_LPJ_G0030730.1 mouse_genomes_project 6 64984322 64986848 + Smarcad1 protein_coding retained_intron MGP_LPJ_T0077266.1 MGP_LPJ_G0030626.1 mouse_genomes_project 6 48302125 48326210 + MGP_LPJ_P0077266 Ccdc126 protein_coding protein_coding MGP_LPJ_T0077267.1 MGP_LPJ_G0030626.1 mouse_genomes_project 6 48302158 48326206 + MGP_LPJ_P0077267 Ccdc126 protein_coding protein_coding MGP_LPJ_T0000175.1 MGP_LPJ_G0000130.1 mouse_genomes_project 6 68502552 68503032 + MGP_LPJ_P0000175 Igkv20-101-2 IG_V_gene IG_V_gene MGP_LPJ_T0080305.1 MGP_LPJ_G0031292.1 mouse_genomes_project 6 137054166 137055150 - MGP_LPJ_P0080305 Tas2r136 protein_coding protein_coding MGP_LPJ_T0077577.1 MGP_LPJ_G0030712.1 mouse_genomes_project 6 57415079 57416025 - MGP_LPJ_P0077577 Vmn1r24 protein_coding protein_coding MGP_LPJ_T0077742.1 MGP_LPJ_G0030754.1 mouse_genomes_project 6 71668761 71682402 + MGP_LPJ_P0077742 Krcc1 protein_coding protein_coding MGP_LPJ_T0077743.1 MGP_LPJ_G0030754.1 mouse_genomes_project 6 71668785 71681323 + MGP_LPJ_P0077743 Krcc1 protein_coding protein_coding MGP_LPJ_T0077744.1 MGP_LPJ_G0030754.1 mouse_genomes_project 6 71669103 71682402 + MGP_LPJ_P0077744 Krcc1 protein_coding protein_coding MGP_LPJ_T0077745.1 MGP_LPJ_G0030754.1 mouse_genomes_project 6 71679362 71682401 + MGP_LPJ_P0077745 Krcc1 protein_coding protein_coding MGP_LPJ_T0005123.1 MGP_LPJ_G0004370.1 mouse_genomes_project 6 132892179 132895883 - antisense antisense MGP_LPJ_T0000364.1 MGP_LPJ_G0000302.1 mouse_genomes_project 6 70902572 70903190 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0015609.1 MGP_LPJ_G0013700.1 mouse_genomes_project 6 144850719 144851908 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002765.1 MGP_LPJ_G0002637.1 mouse_genomes_project 6 39752370 39752634 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0005102.1 MGP_LPJ_G0004353.1 mouse_genomes_project 6 127959198 127961392 - Gm44096 antisense antisense MGP_LPJ_T0000350.1 MGP_LPJ_G0000288.1 mouse_genomes_project 6 69874873 69875268 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0015484.1 MGP_LPJ_G0013575.1 mouse_genomes_project 6 110231465 110231954 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015416.1 MGP_LPJ_G0013507.1 mouse_genomes_project 6 84626433 84627335 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011675.1 MGP_LPJ_G0009793.1 mouse_genomes_project 6 101576643 101576890 + Gm24936 misc_RNA misc_RNA MGP_LPJ_T0077496.1 MGP_LPJ_G0030680.1 mouse_genomes_project 6 55386833 55403370 + MGP_LPJ_P0077496 Ppp1r17 protein_coding protein_coding MGP_LPJ_T0076985.1 MGP_LPJ_G0030549.1 mouse_genomes_project 6 40739259 40756782 + MGP_LPJ_P0076985 Casp2 protein_coding protein_coding MGP_LPJ_T0076986.1 MGP_LPJ_G0030549.1 mouse_genomes_project 6 40739330 40743396 + Casp2 protein_coding retained_intron MGP_LPJ_T0076987.1 MGP_LPJ_G0030549.1 mouse_genomes_project 6 40739394 40754766 + MGP_LPJ_P0076987 Casp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0076988.1 MGP_LPJ_G0030549.1 mouse_genomes_project 6 40741665 40742305 + Casp2 protein_coding processed_transcript MGP_LPJ_T0076989.1 MGP_LPJ_G0030549.1 mouse_genomes_project 6 40742284 40743881 + Casp2 protein_coding retained_intron MGP_LPJ_T0076990.1 MGP_LPJ_G0030549.1 mouse_genomes_project 6 40743558 40754171 + Casp2 protein_coding processed_transcript MGP_LPJ_T0076991.1 MGP_LPJ_G0030549.1 mouse_genomes_project 6 40750760 40754807 + Casp2 protein_coding retained_intron MGP_LPJ_T0076992.1 MGP_LPJ_G0030549.1 mouse_genomes_project 6 40753910 40754764 + Casp2 protein_coding processed_transcript MGP_LPJ_T0076993.1 MGP_LPJ_G0030549.1 mouse_genomes_project 6 40754054 40754915 + Casp2 protein_coding processed_transcript MGP_LPJ_T0076994.1 MGP_LPJ_G0030549.1 mouse_genomes_project 6 40754080 40755041 + Casp2 protein_coding processed_transcript MGP_LPJ_T0098285.1 MGP_LPJ_G0036566.1 mouse_genomes_project 6 28358052 28358148 - Gm25625 rRNA rRNA MGP_LPJ_T0100904.1 MGP_LPJ_G0039167.1 mouse_genomes_project 6 74890816 74890948 + Gm26179 snoRNA snoRNA MGP_LPJ_T0098048.1 MGP_LPJ_G0036329.1 mouse_genomes_project 6 68810574 68810856 - pseudogene pseudogene MGP_LPJ_T0075958.1 MGP_LPJ_G0030332.1 mouse_genomes_project 6 1249189 1261920 + MGP_LPJ_P0075958 Col1a2 protein_coding protein_coding MGP_LPJ_T0075959.1 MGP_LPJ_G0030332.1 mouse_genomes_project 6 1249817 1287900 + MGP_LPJ_P0075959 Col1a2 protein_coding protein_coding MGP_LPJ_T0075960.1 MGP_LPJ_G0030332.1 mouse_genomes_project 6 1250026 1260516 + Col1a2 protein_coding retained_intron MGP_LPJ_T0075961.1 MGP_LPJ_G0030332.1 mouse_genomes_project 6 1250026 1260032 + Col1a2 protein_coding retained_intron MGP_LPJ_T0075962.1 MGP_LPJ_G0030332.1 mouse_genomes_project 6 1266938 1275768 + Col1a2 protein_coding retained_intron MGP_LPJ_T0075963.1 MGP_LPJ_G0030332.1 mouse_genomes_project 6 1276472 1282241 + Col1a2 protein_coding retained_intron MGP_LPJ_T0075964.1 MGP_LPJ_G0030332.1 mouse_genomes_project 6 1282136 1282979 + Col1a2 protein_coding retained_intron MGP_LPJ_T0075965.1 MGP_LPJ_G0030332.1 mouse_genomes_project 6 1283844 1284346 + Col1a2 protein_coding retained_intron MGP_LPJ_T0005086.1 MGP_LPJ_G0004337.1 mouse_genomes_project 6 115828252 115829346 - Gm16161 antisense antisense MGP_LPJ_T0076950.1 MGP_LPJ_G0030534.1 mouse_genomes_project 6 40123211 40138234 + MGP_LPJ_P0076950 Ephb6 protein_coding protein_coding MGP_LPJ_T0076951.1 MGP_LPJ_G0030534.1 mouse_genomes_project 6 40131022 40132336 + Ephb6 protein_coding processed_transcript MGP_LPJ_T0076952.1 MGP_LPJ_G0030534.1 mouse_genomes_project 6 40132416 40134482 + MGP_LPJ_P0076952 Ephb6 protein_coding nonsense_mediated_decay MGP_LPJ_T0076953.1 MGP_LPJ_G0030534.1 mouse_genomes_project 6 40137667 40138232 + MGP_LPJ_P0076953 Ephb6 protein_coding protein_coding MGP_LPJ_T0008791.1 MGP_LPJ_G0007101.1 mouse_genomes_project 6 151778076 151786463 + 4930479D17Rik lincRNA lincRNA MGP_LPJ_T0005055.1 MGP_LPJ_G0004319.1 mouse_genomes_project 6 90282908 90287321 + Gm15612 antisense antisense MGP_LPJ_T0015320.1 MGP_LPJ_G0013411.1 mouse_genomes_project 6 58598346 58600780 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002090.1 MGP_LPJ_G0002000.1 mouse_genomes_project 6 89216896 89219489 - TEC TEC MGP_LPJ_T0015246.1 MGP_LPJ_G0013337.1 mouse_genomes_project 6 34860403 34860608 + processed_pseudogene processed_pseudogene MGP_LPJ_T0076462.1 MGP_LPJ_G0030433.1 mouse_genomes_project 6 27474717 27548506 - MGP_LPJ_P0076462 Tnpo3 protein_coding protein_coding MGP_LPJ_T0076463.1 MGP_LPJ_G0030433.1 mouse_genomes_project 6 27474717 27548786 - MGP_LPJ_P0076463 Tnpo3 protein_coding protein_coding MGP_LPJ_T0076464.1 MGP_LPJ_G0030433.1 mouse_genomes_project 6 27474885 27493989 - MGP_LPJ_P0076464 Tnpo3 protein_coding protein_coding MGP_LPJ_T0076466.1 MGP_LPJ_G0030433.1 mouse_genomes_project 6 27475473 27548710 - MGP_LPJ_P0076466 Tnpo3 protein_coding nonsense_mediated_decay MGP_LPJ_T0076467.1 MGP_LPJ_G0030433.1 mouse_genomes_project 6 27488777 27490960 - Tnpo3 protein_coding retained_intron MGP_LPJ_T0076468.1 MGP_LPJ_G0030433.1 mouse_genomes_project 6 27498771 27548522 - Tnpo3 protein_coding retained_intron MGP_LPJ_T0076469.1 MGP_LPJ_G0030433.1 mouse_genomes_project 6 27502261 27506507 - Tnpo3 protein_coding retained_intron MGP_LPJ_T0076470.1 MGP_LPJ_G0030433.1 mouse_genomes_project 6 27515344 27519155 - Tnpo3 protein_coding retained_intron MGP_LPJ_T0076471.1 MGP_LPJ_G0030433.1 mouse_genomes_project 6 27516845 27548718 - Tnpo3 protein_coding retained_intron MGP_LPJ_T0076472.1 MGP_LPJ_G0030433.1 mouse_genomes_project 6 27520111 27548533 - Tnpo3 protein_coding retained_intron MGP_LPJ_T0076473.1 MGP_LPJ_G0030433.1 mouse_genomes_project 6 27525852 27548512 - Tnpo3 protein_coding processed_transcript MGP_LPJ_T0010812.1 MGP_LPJ_G0008930.1 mouse_genomes_project 6 104960588 104960690 + Mir6373 miRNA miRNA MGP_LPJ_T0099664.1 MGP_LPJ_G0037927.1 mouse_genomes_project 6 98397780 98397884 - Gm26011 snRNA snRNA MGP_LPJ_T0002091.1 MGP_LPJ_G0002001.1 mouse_genomes_project 6 89239027 89240114 + TEC TEC MGP_LPJ_T0011670.1 MGP_LPJ_G0009788.1 mouse_genomes_project 6 84732708 84732895 + Gm27772 misc_RNA misc_RNA MGP_LPJ_T0080578.1 MGP_LPJ_G0031355.1 mouse_genomes_project 6 145591529 145622344 + MGP_LPJ_P0080578 Gm11077 protein_coding protein_coding MGP_LPJ_T0015231.1 MGP_LPJ_G0013322.1 mouse_genomes_project 6 22314058 22314767 + processed_pseudogene processed_pseudogene MGP_LPJ_T0077574.1 MGP_LPJ_G0030709.1 mouse_genomes_project 6 57358810 57360544 - MGP_LPJ_P0077574 Vmn1r22 protein_coding protein_coding MGP_LPJ_T0077493.1 MGP_LPJ_G0030678.1 mouse_genomes_project 6 55021576 55025026 - MGP_LPJ_P0077493 Neurod6 protein_coding protein_coding MGP_LPJ_T0076415.1 MGP_LPJ_G0030425.1 mouse_genomes_project 6 27269730 27298187 + MGP_LPJ_P0076415 Calu protein_coding protein_coding MGP_LPJ_T0076416.1 MGP_LPJ_G0030425.1 mouse_genomes_project 6 27269730 27298187 + MGP_LPJ_P0076416 Calu protein_coding protein_coding MGP_LPJ_T0076417.1 MGP_LPJ_G0030425.1 mouse_genomes_project 6 27269767 27300359 + MGP_LPJ_P0076417 Calu protein_coding protein_coding MGP_LPJ_T0076418.1 MGP_LPJ_G0030425.1 mouse_genomes_project 6 27269780 27299813 + MGP_LPJ_P0076418 Calu protein_coding protein_coding MGP_LPJ_T0076419.1 MGP_LPJ_G0030425.1 mouse_genomes_project 6 27269789 27300360 + MGP_LPJ_P0076419 Calu protein_coding protein_coding MGP_LPJ_T0076420.1 MGP_LPJ_G0030425.1 mouse_genomes_project 6 27279231 27298709 + MGP_LPJ_P0076420 Calu protein_coding nonsense_mediated_decay MGP_LPJ_T0076421.1 MGP_LPJ_G0030425.1 mouse_genomes_project 6 27284222 27297026 + MGP_LPJ_P0076421 Calu protein_coding protein_coding MGP_LPJ_T0076422.1 MGP_LPJ_G0030425.1 mouse_genomes_project 6 27296230 27300794 + MGP_LPJ_P0076422 Calu protein_coding protein_coding MGP_LPJ_T0076423.1 MGP_LPJ_G0030425.1 mouse_genomes_project 6 27297339 27298715 + Calu protein_coding processed_transcript MGP_LPJ_T0080061.1 MGP_LPJ_G0031206.1 mouse_genomes_project 6 130466936 130511401 - MGP_LPJ_P0080061 Dyrk4 protein_coding protein_coding MGP_LPJ_T0080062.1 MGP_LPJ_G0031206.1 mouse_genomes_project 6 130467109 130476301 - MGP_LPJ_P0080062 Dyrk4 protein_coding nonsense_mediated_decay MGP_LPJ_T0080063.1 MGP_LPJ_G0031206.1 mouse_genomes_project 6 130467115 130497123 - Dyrk4 protein_coding processed_transcript MGP_LPJ_T0080252.1 MGP_LPJ_G0031257.1 mouse_genomes_project 6 133579179 133600210 - MGP_LPJ_P0080252 Klri1 protein_coding protein_coding MGP_LPJ_T0001938.1 MGP_LPJ_G0001848.1 mouse_genomes_project 6 1360603 1361540 + TEC TEC MGP_LPJ_T0008595.1 MGP_LPJ_G0006949.1 mouse_genomes_project 6 47452054 47452947 - 1700026J14Rik lincRNA lincRNA MGP_LPJ_T0079788.1 MGP_LPJ_G0031158.1 mouse_genomes_project 6 128174602 128179139 - Emg1 protein_coding retained_intron MGP_LPJ_T0079789.1 MGP_LPJ_G0031158.1 mouse_genomes_project 6 128174898 128182903 - MGP_LPJ_P0079789 Emg1 protein_coding protein_coding MGP_LPJ_T0079790.1 MGP_LPJ_G0031158.1 mouse_genomes_project 6 128174899 128176385 - Emg1 protein_coding processed_transcript MGP_LPJ_T0079791.1 MGP_LPJ_G0031158.1 mouse_genomes_project 6 128174975 128182794 - Emg1 protein_coding retained_intron MGP_LPJ_T0079792.1 MGP_LPJ_G0031158.1 mouse_genomes_project 6 128175468 128182866 - Emg1 protein_coding retained_intron MGP_LPJ_T0079793.1 MGP_LPJ_G0031158.1 mouse_genomes_project 6 128175677 128182782 - MGP_LPJ_P0079793 Emg1 protein_coding protein_coding MGP_LPJ_T0011660.1 MGP_LPJ_G0009778.1 mouse_genomes_project 6 51466581 51466672 + Gm27695 misc_RNA misc_RNA MGP_LPJ_T0080321.1 MGP_LPJ_G0031305.1 mouse_genomes_project 6 137643575 137647148 + MGP_LPJ_P0080321 5530400C23Rik protein_coding protein_coding MGP_LPJ_T0002104.1 MGP_LPJ_G0002014.1 mouse_genomes_project 6 91896434 91900180 + TEC TEC MGP_LPJ_T0076136.1 MGP_LPJ_G0030369.1 mouse_genomes_project 6 12110615 12666982 + MGP_LPJ_P0076136 Foxp2 protein_coding protein_coding MGP_LPJ_T0076137.1 MGP_LPJ_G0030369.1 mouse_genomes_project 6 12110654 12634526 + Foxp2 protein_coding retained_intron MGP_LPJ_T0076138.1 MGP_LPJ_G0030369.1 mouse_genomes_project 6 12110717 12194910 + Foxp2 protein_coding processed_transcript MGP_LPJ_T0076139.1 MGP_LPJ_G0030369.1 mouse_genomes_project 6 12110743 12506279 + MGP_LPJ_P0076139 Foxp2 protein_coding protein_coding MGP_LPJ_T0076140.1 MGP_LPJ_G0030369.1 mouse_genomes_project 6 12110744 12507261 + Foxp2 protein_coding retained_intron MGP_LPJ_T0076141.1 MGP_LPJ_G0030369.1 mouse_genomes_project 6 12112723 12414358 + Foxp2 protein_coding processed_transcript MGP_LPJ_T0076142.1 MGP_LPJ_G0030369.1 mouse_genomes_project 6 12401011 12416744 + MGP_LPJ_P0076142 Foxp2 protein_coding protein_coding MGP_LPJ_T0076143.1 MGP_LPJ_G0030369.1 mouse_genomes_project 6 12401805 12663029 + MGP_LPJ_P0076143 Foxp2 protein_coding protein_coding MGP_LPJ_T0076144.1 MGP_LPJ_G0030369.1 mouse_genomes_project 6 12401805 12663310 + MGP_LPJ_P0076144 Foxp2 protein_coding protein_coding MGP_LPJ_T0076145.1 MGP_LPJ_G0030369.1 mouse_genomes_project 6 12401805 12666206 + MGP_LPJ_P0076145 Foxp2 protein_coding protein_coding MGP_LPJ_T0076146.1 MGP_LPJ_G0030369.1 mouse_genomes_project 6 12401862 12617371 + MGP_LPJ_P0076146 Foxp2 protein_coding protein_coding MGP_LPJ_T0076147.1 MGP_LPJ_G0030369.1 mouse_genomes_project 6 12414347 12620431 + Foxp2 protein_coding retained_intron MGP_LPJ_T0076148.1 MGP_LPJ_G0030369.1 mouse_genomes_project 6 12414349 12628261 + MGP_LPJ_P0076148 Foxp2 protein_coding protein_coding MGP_LPJ_T0076149.1 MGP_LPJ_G0030369.1 mouse_genomes_project 6 12414349 12603292 + MGP_LPJ_P0076149 Foxp2 protein_coding protein_coding MGP_LPJ_T0076150.1 MGP_LPJ_G0030369.1 mouse_genomes_project 6 12414362 12628261 + MGP_LPJ_P0076150 Foxp2 protein_coding protein_coding MGP_LPJ_T0076151.1 MGP_LPJ_G0030369.1 mouse_genomes_project 6 12472417 12506279 + Foxp2 protein_coding processed_transcript MGP_LPJ_T0076152.1 MGP_LPJ_G0030369.1 mouse_genomes_project 6 12544554 12545732 + Foxp2 protein_coding retained_intron MGP_LPJ_T0076153.1 MGP_LPJ_G0030369.1 mouse_genomes_project 6 12600153 12601559 + Foxp2 protein_coding processed_transcript MGP_LPJ_T0076154.1 MGP_LPJ_G0030369.1 mouse_genomes_project 6 12600153 12664054 + MGP_LPJ_P0076154 Foxp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0015479.1 MGP_LPJ_G0013570.1 mouse_genomes_project 6 107825239 107825547 + processed_pseudogene processed_pseudogene MGP_LPJ_T0077242.1 MGP_LPJ_G0030620.1 mouse_genomes_project 6 47938356 47942139 + MGP_LPJ_P0077242 Doxl2 protein_coding protein_coding MGP_LPJ_T0077243.1 MGP_LPJ_G0030620.1 mouse_genomes_project 6 47938467 47942140 + MGP_LPJ_P0077243 Doxl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0077244.1 MGP_LPJ_G0030620.1 mouse_genomes_project 6 47940627 47942137 + Doxl2 protein_coding retained_intron MGP_LPJ_T0008598.1 MGP_LPJ_G0006952.1 mouse_genomes_project 6 47817921 47823668 + Gm7932 lincRNA lincRNA MGP_LPJ_T0008599.1 MGP_LPJ_G0006952.1 mouse_genomes_project 6 47818016 47822029 + Gm7932 lincRNA lincRNA MGP_LPJ_T0008798.1 MGP_LPJ_G0007105.1 mouse_genomes_project 6 152897867 152900895 - lincRNA lincRNA MGP_LPJ_T0015244.1 MGP_LPJ_G0013335.1 mouse_genomes_project 6 33026504 33026701 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015391.1 MGP_LPJ_G0013482.1 mouse_genomes_project 6 72293938 72294732 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002757.1 MGP_LPJ_G0002629.1 mouse_genomes_project 6 39577938 39578227 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0008715.1 MGP_LPJ_G0007042.1 mouse_genomes_project 6 109515147 109609361 - Gm44398 lincRNA lincRNA MGP_LPJ_T0077044.1 MGP_LPJ_G0030565.1 mouse_genomes_project 6 41269735 41273969 + MGP_LPJ_P0077044 Olfr38 protein_coding protein_coding MGP_LPJ_T0100895.1 MGP_LPJ_G0039158.1 mouse_genomes_project 6 59717032 59717161 - Gm22723 snoRNA snoRNA MGP_LPJ_T0015179.1 MGP_LPJ_G0013270.1 mouse_genomes_project 6 1005361 1005457 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010830.1 MGP_LPJ_G0008948.1 mouse_genomes_project 6 128189046 128189115 - Mir200c miRNA miRNA MGP_LPJ_T0076394.1 MGP_LPJ_G0030420.1 mouse_genomes_project 6 27079187 27089469 - MGP_LPJ_P0076394 Prrt4 protein_coding unknown_likely_coding MGP_LPJ_T0015448.1 MGP_LPJ_G0013539.1 mouse_genomes_project 6 94775170 94776157 - processed_pseudogene processed_pseudogene MGP_LPJ_T0078835.1 MGP_LPJ_G0030974.1 mouse_genomes_project 6 99073736 99100751 + MGP_LPJ_P0078835 Arl6ip5 protein_coding protein_coding MGP_LPJ_T0011637.1 MGP_LPJ_G0009755.1 mouse_genomes_project 6 15038542 15038674 + Gm27755 misc_RNA misc_RNA MGP_LPJ_T0010806.1 MGP_LPJ_G0008924.1 mouse_genomes_project 6 89520141 89520272 - Mir6376 miRNA miRNA MGP_LPJ_T0076760.1 MGP_LPJ_G0030482.1 mouse_genomes_project 6 35828587 35865519 + MGP_LPJ_P0076760 Akr1d1 protein_coding protein_coding MGP_LPJ_T0076761.1 MGP_LPJ_G0030482.1 mouse_genomes_project 6 35840881 35854282 + Akr1d1 protein_coding processed_transcript MGP_LPJ_T0015458.1 MGP_LPJ_G0013549.1 mouse_genomes_project 6 97725490 97726679 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101386.1 MGP_LPJ_G0039574.1 mouse_genomes_project 6 84626435 84627207 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0000354.1 MGP_LPJ_G0000292.1 mouse_genomes_project 6 70081075 70081545 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0008730.1 MGP_LPJ_G0007055.1 mouse_genomes_project 6 120386337 120437335 - lincRNA lincRNA MGP_LPJ_T0010798.1 MGP_LPJ_G0008916.1 mouse_genomes_project 6 82848125 82848203 - Mir468 miRNA miRNA MGP_LPJ_T0010801.1 MGP_LPJ_G0008919.1 mouse_genomes_project 6 84415648 84415755 - Mir6374 miRNA miRNA MGP_LPJ_T0008659.1 MGP_LPJ_G0007002.1 mouse_genomes_project 6 83800381 83814695 + Gm43878 lincRNA lincRNA MGP_LPJ_T0008660.1 MGP_LPJ_G0007002.1 mouse_genomes_project 6 83807751 83814707 + Gm43878 lincRNA lincRNA MGP_LPJ_T0008661.1 MGP_LPJ_G0007002.1 mouse_genomes_project 6 83807786 83818723 + Gm43878 lincRNA lincRNA MGP_LPJ_T0078777.1 MGP_LPJ_G0030962.1 mouse_genomes_project 6 95356010 96010604 - MGP_LPJ_P0078777 Magi1 protein_coding protein_coding MGP_LPJ_T0078778.1 MGP_LPJ_G0030962.1 mouse_genomes_project 6 95356010 96011199 - MGP_LPJ_P0078778 Magi1 protein_coding protein_coding MGP_LPJ_T0078779.1 MGP_LPJ_G0030962.1 mouse_genomes_project 6 95356010 96010604 - MGP_LPJ_P0078779 Magi1 protein_coding protein_coding MGP_LPJ_T0078780.1 MGP_LPJ_G0030962.1 mouse_genomes_project 6 95358594 95606724 - MGP_LPJ_P0078780 Magi1 protein_coding protein_coding MGP_LPJ_T0078781.1 MGP_LPJ_G0030962.1 mouse_genomes_project 6 95362036 95606588 - MGP_LPJ_P0078781 Magi1 protein_coding protein_coding MGP_LPJ_T0078782.1 MGP_LPJ_G0030962.1 mouse_genomes_project 6 95362038 95638201 - MGP_LPJ_P0078782 Magi1 protein_coding protein_coding MGP_LPJ_T0078783.1 MGP_LPJ_G0030962.1 mouse_genomes_project 6 95362625 95605995 - MGP_LPJ_P0078783 Magi1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078784.1 MGP_LPJ_G0030962.1 mouse_genomes_project 6 95363568 96011177 - MGP_LPJ_P0078784 Magi1 protein_coding protein_coding MGP_LPJ_T0078785.1 MGP_LPJ_G0030962.1 mouse_genomes_project 6 95454908 95605537 - MGP_LPJ_P0078785 Magi1 protein_coding protein_coding MGP_LPJ_T0078786.1 MGP_LPJ_G0030962.1 mouse_genomes_project 6 95467467 95475705 - MGP_LPJ_P0078786 Magi1 protein_coding protein_coding MGP_LPJ_T0078787.1 MGP_LPJ_G0030962.1 mouse_genomes_project 6 95840774 96010307 - Magi1 protein_coding processed_transcript MGP_LPJ_T0078715.1 MGP_LPJ_G0030949.1 mouse_genomes_project 6 93253247 93333425 + MGP_LPJ_P0078715 Slc6a6 protein_coding protein_coding MGP_LPJ_T0078716.1 MGP_LPJ_G0030949.1 mouse_genomes_project 6 93253263 93309543 + Slc6a6 protein_coding processed_transcript MGP_LPJ_T0078717.1 MGP_LPJ_G0030949.1 mouse_genomes_project 6 93253289 93301311 + Slc6a6 protein_coding retained_intron MGP_LPJ_T0078718.1 MGP_LPJ_G0030949.1 mouse_genomes_project 6 93253314 93299322 + MGP_LPJ_P0078718 Slc6a6 protein_coding protein_coding MGP_LPJ_T0078719.1 MGP_LPJ_G0030949.1 mouse_genomes_project 6 93253322 93299357 + MGP_LPJ_P0078719 Slc6a6 protein_coding protein_coding MGP_LPJ_T0078720.1 MGP_LPJ_G0030949.1 mouse_genomes_project 6 93253343 93269696 + Slc6a6 protein_coding retained_intron MGP_LPJ_T0078721.1 MGP_LPJ_G0030949.1 mouse_genomes_project 6 93272039 93299243 + MGP_LPJ_P0078721 Slc6a6 protein_coding protein_coding MGP_LPJ_T0078722.1 MGP_LPJ_G0030949.1 mouse_genomes_project 6 93299338 93319391 + MGP_LPJ_P0078722 Slc6a6 protein_coding nonsense_mediated_decay MGP_LPJ_T0078723.1 MGP_LPJ_G0030949.1 mouse_genomes_project 6 93314011 93315457 + Slc6a6 protein_coding retained_intron MGP_LPJ_T0078724.1 MGP_LPJ_G0030949.1 mouse_genomes_project 6 93322717 93324527 + Slc6a6 protein_coding retained_intron MGP_LPJ_T0078725.1 MGP_LPJ_G0030949.1 mouse_genomes_project 6 93324540 93327135 + Slc6a6 protein_coding retained_intron MGP_LPJ_T0015606.1 MGP_LPJ_G0013697.1 mouse_genomes_project 6 141262170 141262449 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000328.1 MGP_LPJ_G0000266.1 mouse_genomes_project 6 68347651 68348306 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0005147.1 MGP_LPJ_G0004391.1 mouse_genomes_project 6 150111421 150114293 + Gm26666 antisense antisense MGP_LPJ_T0002012.1 MGP_LPJ_G0001922.1 mouse_genomes_project 6 51477005 51478248 - TEC TEC MGP_LPJ_T0015192.1 MGP_LPJ_G0013283.1 mouse_genomes_project 6 4712304 4712692 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015465.1 MGP_LPJ_G0013556.1 mouse_genomes_project 6 101855871 101856478 - processed_pseudogene processed_pseudogene MGP_LPJ_T0077643.1 MGP_LPJ_G0030729.1 mouse_genomes_project 6 64586259 64588380 + MGP_LPJ_P0077643 Atoh1 protein_coding protein_coding MGP_LPJ_T0008772.1 MGP_LPJ_G0007087.1 mouse_genomes_project 6 144092732 144099709 - 4922502N22Rik lincRNA lincRNA MGP_LPJ_T0077123.1 MGP_LPJ_G0030592.1 mouse_genomes_project 6 46766533 46778541 + MGP_LPJ_P0077123 Zfp956 protein_coding protein_coding MGP_LPJ_T0077124.1 MGP_LPJ_G0030592.1 mouse_genomes_project 6 46766588 46769496 + Zfp956 protein_coding retained_intron MGP_LPJ_T0077125.1 MGP_LPJ_G0030592.1 mouse_genomes_project 6 46766590 46778538 + MGP_LPJ_P0077125 Zfp956 protein_coding nonsense_mediated_decay MGP_LPJ_T0002044.1 MGP_LPJ_G0001954.1 mouse_genomes_project 6 73401664 73402622 - TEC TEC MGP_LPJ_T0015518.1 MGP_LPJ_G0013609.1 mouse_genomes_project 6 120754593 120755379 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008674.1 MGP_LPJ_G0007012.1 mouse_genomes_project 6 88074961 88078562 + Gm44036 lincRNA lincRNA MGP_LPJ_T0076943.1 MGP_LPJ_G0030527.1 mouse_genomes_project 6 39486531 39490016 - MGP_LPJ_P0076943 protein_coding protein_coding MGP_LPJ_T0079891.1 MGP_LPJ_G0031175.1 mouse_genomes_project 6 128398227 128402496 - MGP_LPJ_P0079891 Ptms protein_coding protein_coding MGP_LPJ_T0079892.1 MGP_LPJ_G0031175.1 mouse_genomes_project 6 128398234 128399224 - Ptms protein_coding processed_transcript MGP_LPJ_T0079893.1 MGP_LPJ_G0031175.1 mouse_genomes_project 6 128398310 128404650 - Ptms protein_coding processed_transcript MGP_LPJ_T0079894.1 MGP_LPJ_G0031175.1 mouse_genomes_project 6 128398595 128399774 - Ptms protein_coding retained_intron MGP_LPJ_T0079895.1 MGP_LPJ_G0031175.1 mouse_genomes_project 6 128399190 128400079 - Ptms protein_coding processed_transcript MGP_LPJ_T0008591.1 MGP_LPJ_G0006945.1 mouse_genomes_project 6 42723410 42726267 - Gm35216 lincRNA lincRNA MGP_LPJ_T0015586.1 MGP_LPJ_G0013677.1 mouse_genomes_project 6 136359933 136360384 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015443.1 MGP_LPJ_G0013534.1 mouse_genomes_project 6 93150837 93151232 + processed_pseudogene processed_pseudogene MGP_LPJ_T0078044.1 MGP_LPJ_G0030814.1 mouse_genomes_project 6 84085014 84086854 + MGP_LPJ_P0078044 Lbx2 protein_coding protein_coding MGP_LPJ_T0078045.1 MGP_LPJ_G0030814.1 mouse_genomes_project 6 84085948 84086707 + Lbx2 protein_coding processed_transcript MGP_LPJ_T0015339.1 MGP_LPJ_G0013430.1 mouse_genomes_project 6 65027089 65027318 + processed_pseudogene processed_pseudogene MGP_LPJ_T0076970.1 MGP_LPJ_G0030541.1 mouse_genomes_project 6 40362195 40373575 + MGP_LPJ_P0076970 Sval2 protein_coding protein_coding MGP_LPJ_T0076971.1 MGP_LPJ_G0030541.1 mouse_genomes_project 6 40369400 40373534 + MGP_LPJ_P0076971 Sval2 protein_coding protein_coding MGP_LPJ_T0076972.1 MGP_LPJ_G0030541.1 mouse_genomes_project 6 40370953 40373534 + MGP_LPJ_P0076972 Sval2 protein_coding protein_coding MGP_LPJ_T0076973.1 MGP_LPJ_G0030541.1 mouse_genomes_project 6 40372501 40373451 + Sval2 protein_coding retained_intron MGP_LPJ_T0015281.1 MGP_LPJ_G0013372.1 mouse_genomes_project 6 46655995 46656391 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001953.1 MGP_LPJ_G0001863.1 mouse_genomes_project 6 15070664 15073585 + TEC TEC MGP_LPJ_T0002042.1 MGP_LPJ_G0001952.1 mouse_genomes_project 6 73128992 73130273 + TEC TEC MGP_LPJ_T0079091.1 MGP_LPJ_G0031020.1 mouse_genomes_project 6 115943335 115953697 + MGP_LPJ_P0079091 Ttll3 protein_coding protein_coding MGP_LPJ_T0079092.1 MGP_LPJ_G0031020.1 mouse_genomes_project 6 115944812 115953097 + Ttll3 protein_coding processed_transcript MGP_LPJ_T0079093.1 MGP_LPJ_G0031020.1 mouse_genomes_project 6 115946533 115970338 + MGP_LPJ_P0079093 Ttll3 protein_coding protein_coding MGP_LPJ_T0079094.1 MGP_LPJ_G0031020.1 mouse_genomes_project 6 115946572 115970320 + MGP_LPJ_P0079094 Ttll3 protein_coding protein_coding MGP_LPJ_T0079095.1 MGP_LPJ_G0031020.1 mouse_genomes_project 6 115947235 115970334 + MGP_LPJ_P0079095 Ttll3 protein_coding protein_coding MGP_LPJ_T0079096.1 MGP_LPJ_G0031020.1 mouse_genomes_project 6 115947252 115964382 + MGP_LPJ_P0079096 Ttll3 protein_coding nonsense_mediated_decay MGP_LPJ_T0079097.1 MGP_LPJ_G0031020.1 mouse_genomes_project 6 115951984 115970313 + Ttll3 protein_coding retained_intron MGP_LPJ_T0079098.1 MGP_LPJ_G0031020.1 mouse_genomes_project 6 115963688 115964382 + Ttll3 protein_coding processed_transcript MGP_LPJ_T0079099.1 MGP_LPJ_G0031020.1 mouse_genomes_project 6 115968581 115970309 + Ttll3 protein_coding processed_transcript MGP_LPJ_T0079687.1 MGP_LPJ_G0031125.1 mouse_genomes_project 6 125798108 125810872 + MGP_LPJ_P0079687 Aicda protein_coding protein_coding MGP_LPJ_T0079688.1 MGP_LPJ_G0031125.1 mouse_genomes_project 6 125807175 125809768 + MGP_LPJ_P0079688 Aicda protein_coding protein_coding MGP_LPJ_T0078157.1 MGP_LPJ_G0030838.1 mouse_genomes_project 6 84805004 84814275 - MGP_LPJ_P0078157 Tex261 protein_coding protein_coding MGP_LPJ_T0078158.1 MGP_LPJ_G0030838.1 mouse_genomes_project 6 84806532 84814252 - Tex261 protein_coding retained_intron MGP_LPJ_T0078159.1 MGP_LPJ_G0030838.1 mouse_genomes_project 6 84807303 84808592 - Tex261 protein_coding retained_intron MGP_LPJ_T0078160.1 MGP_LPJ_G0030838.1 mouse_genomes_project 6 84809723 84814220 - Tex261 protein_coding retained_intron MGP_LPJ_T0102223.1 MGP_LPJ_G0040260.1 mouse_genomes_project 6 41702486 41702793 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0000053.1 MGP_LPJ_G0000043.1 mouse_genomes_project 6 71077692 71077730 + MGP_LPJ_P0000053 Igkj5 IG_J_gene IG_J_gene MGP_LPJ_T0000054.1 MGP_LPJ_G0000043.1 mouse_genomes_project 6 71077692 71077734 + Igkj5 IG_J_gene processed_transcript MGP_LPJ_T0080626.1 MGP_LPJ_G0031368.1 mouse_genomes_project 6 147315719 147332785 + MGP_LPJ_P0080626 Golt1b protein_coding protein_coding MGP_LPJ_T0080627.1 MGP_LPJ_G0031368.1 mouse_genomes_project 6 147315751 147330655 + Golt1b protein_coding processed_transcript MGP_LPJ_T0077047.1 MGP_LPJ_G0030568.1 mouse_genomes_project 6 41342474 41346550 + MGP_LPJ_P0077047 Olfr449 protein_coding protein_coding MGP_LPJ_T0077048.1 MGP_LPJ_G0030568.1 mouse_genomes_project 6 41342474 41346364 + MGP_LPJ_P0077048 Olfr449 protein_coding protein_coding MGP_LPJ_T0077049.1 MGP_LPJ_G0030568.1 mouse_genomes_project 6 41342522 41346030 + MGP_LPJ_P0077049 Olfr449 protein_coding protein_coding MGP_LPJ_T0077050.1 MGP_LPJ_G0030568.1 mouse_genomes_project 6 41345941 41346978 + MGP_LPJ_P0077050 Olfr449 protein_coding protein_coding MGP_LPJ_T0005058.1 MGP_LPJ_G0004322.1 mouse_genomes_project 6 92209080 92210179 + Gm44123 antisense antisense MGP_LPJ_T0077306.1 MGP_LPJ_G0030634.1 mouse_genomes_project 6 49651208 49674539 - MGP_LPJ_P0077306 4921507P07Rik protein_coding protein_coding MGP_LPJ_T0080581.1 MGP_LPJ_G0031357.1 mouse_genomes_project 6 146424686 146471187 + MGP_LPJ_P0080581 Slco1c1 protein_coding nonsense_mediated_decay MGP_LPJ_T0080582.1 MGP_LPJ_G0031357.1 mouse_genomes_project 6 146424704 146471203 + MGP_LPJ_P0080582 Slco1c1 protein_coding nonsense_mediated_decay MGP_LPJ_T0080583.1 MGP_LPJ_G0031357.1 mouse_genomes_project 6 146424705 146471095 + MGP_LPJ_P0080583 Slco1c1 protein_coding protein_coding MGP_LPJ_T0080584.1 MGP_LPJ_G0031357.1 mouse_genomes_project 6 146424853 146471604 + MGP_LPJ_P0080584 Slco1c1 protein_coding protein_coding MGP_LPJ_T0080585.1 MGP_LPJ_G0031357.1 mouse_genomes_project 6 146447812 146450115 + Slco1c1 protein_coding retained_intron MGP_LPJ_T0008565.1 MGP_LPJ_G0006930.1 mouse_genomes_project 6 29826930 29833493 - Gm43293 lincRNA lincRNA MGP_LPJ_T0102268.1 MGP_LPJ_G0040305.1 mouse_genomes_project 6 134515059 134533461 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0098297.1 MGP_LPJ_G0036578.1 mouse_genomes_project 6 150102109 150102224 - Gm23071 rRNA rRNA MGP_LPJ_T0077795.1 MGP_LPJ_G0030764.1 mouse_genomes_project 6 72305924 72309541 - Ptcd3 protein_coding retained_intron MGP_LPJ_T0077796.1 MGP_LPJ_G0030764.1 mouse_genomes_project 6 72305926 72336554 - MGP_LPJ_P0077796 Ptcd3 protein_coding protein_coding MGP_LPJ_T0077797.1 MGP_LPJ_G0030764.1 mouse_genomes_project 6 72305927 72336554 - MGP_LPJ_P0077797 Ptcd3 protein_coding nonsense_mediated_decay MGP_LPJ_T0077798.1 MGP_LPJ_G0030764.1 mouse_genomes_project 6 72305929 72316613 - Ptcd3 protein_coding retained_intron MGP_LPJ_T0077799.1 MGP_LPJ_G0030764.1 mouse_genomes_project 6 72308098 72336544 - MGP_LPJ_P0077799 Ptcd3 protein_coding unknown_likely_coding MGP_LPJ_T0077800.1 MGP_LPJ_G0030764.1 mouse_genomes_project 6 72312050 72316538 - Ptcd3 protein_coding retained_intron MGP_LPJ_T0077801.1 MGP_LPJ_G0030764.1 mouse_genomes_project 6 72314199 72336548 - Ptcd3 protein_coding retained_intron MGP_LPJ_T0077802.1 MGP_LPJ_G0030764.1 mouse_genomes_project 6 72315553 72324082 - MGP_LPJ_P0077802 Ptcd3 protein_coding nonsense_mediated_decay MGP_LPJ_T0077803.1 MGP_LPJ_G0030764.1 mouse_genomes_project 6 72319907 72322064 - Ptcd3 protein_coding retained_intron MGP_LPJ_T0077804.1 MGP_LPJ_G0030764.1 mouse_genomes_project 6 72322222 72325366 - Ptcd3 protein_coding retained_intron MGP_LPJ_T0077805.1 MGP_LPJ_G0030764.1 mouse_genomes_project 6 72325322 72336522 - MGP_LPJ_P0077805 Ptcd3 protein_coding nonsense_mediated_decay MGP_LPJ_T0077806.1 MGP_LPJ_G0030764.1 mouse_genomes_project 6 72330490 72331275 - Ptcd3 protein_coding retained_intron MGP_LPJ_T0102231.1 MGP_LPJ_G0040268.1 mouse_genomes_project 6 57562751 57563661 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0010819.1 MGP_LPJ_G0008937.1 mouse_genomes_project 6 117725011 117725106 + Gm24767 miRNA miRNA MGP_LPJ_T0076947.1 MGP_LPJ_G0030531.1 mouse_genomes_project 6 39927429 39930183 - MGP_LPJ_P0076947 protein_coding protein_coding MGP_LPJ_T0100928.1 MGP_LPJ_G0039191.1 mouse_genomes_project 6 127532592 127532668 - Gm24843 snoRNA snoRNA MGP_LPJ_T0011665.1 MGP_LPJ_G0009783.1 mouse_genomes_project 6 51484108 51484486 + Gm27985 misc_RNA misc_RNA MGP_LPJ_T0008729.1 MGP_LPJ_G0007054.1 mouse_genomes_project 6 120329740 120358585 - Gm45083 lincRNA lincRNA MGP_LPJ_T0078775.1 MGP_LPJ_G0030961.1 mouse_genomes_project 6 94496611 94511701 + MGP_LPJ_P0078775 Gm15737 protein_coding protein_coding MGP_LPJ_T0015398.1 MGP_LPJ_G0013489.1 mouse_genomes_project 6 74385839 74386025 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002103.1 MGP_LPJ_G0002013.1 mouse_genomes_project 6 91792798 91795914 + TEC TEC MGP_LPJ_T0005087.1 MGP_LPJ_G0004338.1 mouse_genomes_project 6 115861080 115880445 - Gm15492 antisense antisense MGP_LPJ_T0078795.1 MGP_LPJ_G0030964.1 mouse_genomes_project 6 96351036 96447334 - MGP_LPJ_P0078795 Lrig1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078796.1 MGP_LPJ_G0030964.1 mouse_genomes_project 6 96351041 96447321 - MGP_LPJ_P0078796 Lrig1 protein_coding protein_coding MGP_LPJ_T0078797.1 MGP_LPJ_G0030964.1 mouse_genomes_project 6 96351043 96447313 - MGP_LPJ_P0078797 Lrig1 protein_coding protein_coding MGP_LPJ_T0078798.1 MGP_LPJ_G0030964.1 mouse_genomes_project 6 96351186 96351900 - Lrig1 protein_coding processed_transcript MGP_LPJ_T0078799.1 MGP_LPJ_G0030964.1 mouse_genomes_project 6 96371507 96427814 - Lrig1 protein_coding processed_transcript MGP_LPJ_T0078800.1 MGP_LPJ_G0030964.1 mouse_genomes_project 6 96372923 96402420 - Lrig1 protein_coding processed_transcript MGP_LPJ_T0078801.1 MGP_LPJ_G0030964.1 mouse_genomes_project 6 96374548 96426050 - Lrig1 protein_coding processed_transcript MGP_LPJ_T0077949.1 MGP_LPJ_G0030795.1 mouse_genomes_project 6 79149979 79155941 + MGP_LPJ_P0077949 Reg1 protein_coding protein_coding MGP_LPJ_T0077950.1 MGP_LPJ_G0030795.1 mouse_genomes_project 6 79150039 79155941 + MGP_LPJ_P0077950 Reg1 protein_coding protein_coding MGP_LPJ_T0077951.1 MGP_LPJ_G0030795.1 mouse_genomes_project 6 79153256 79155940 + MGP_LPJ_P0077951 Reg1 protein_coding protein_coding MGP_LPJ_T0080433.1 MGP_LPJ_G0031329.1 mouse_genomes_project 6 141264463 141348400 - MGP_LPJ_P0080433 Gucy2c protein_coding protein_coding MGP_LPJ_T0080434.1 MGP_LPJ_G0031329.1 mouse_genomes_project 6 141264464 141348377 - MGP_LPJ_P0080434 Gucy2c protein_coding protein_coding MGP_LPJ_T0002167.1 MGP_LPJ_G0002076.1 mouse_genomes_project 6 128571967 128572560 + TEC TEC MGP_LPJ_T0015513.1 MGP_LPJ_G0013604.1 mouse_genomes_project 6 119668602 119669032 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015445.1 MGP_LPJ_G0013536.1 mouse_genomes_project 6 93864303 93864459 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000176.1 MGP_LPJ_G0000131.1 mouse_genomes_project 6 68544170 68544636 + MGP_LPJ_P0000176 Igkv14-100 IG_V_gene IG_V_gene MGP_LPJ_T0000177.1 MGP_LPJ_G0000131.1 mouse_genomes_project 6 68544170 68544636 + MGP_LPJ_P0000177 Igkv14-100 IG_V_gene IG_V_gene MGP_LPJ_T0077246.1 MGP_LPJ_G0030622.1 mouse_genomes_project 6 48000621 48002453 + Gpnmb protein_coding retained_intron MGP_LPJ_T0077247.1 MGP_LPJ_G0030622.1 mouse_genomes_project 6 48000690 48022258 + MGP_LPJ_P0077247 Gpnmb protein_coding protein_coding MGP_LPJ_T0077248.1 MGP_LPJ_G0030622.1 mouse_genomes_project 6 48000740 48006982 + MGP_LPJ_P0077248 Gpnmb protein_coding nonsense_mediated_decay MGP_LPJ_T0077249.1 MGP_LPJ_G0030622.1 mouse_genomes_project 6 48000752 48036976 + MGP_LPJ_P0077249 Gpnmb protein_coding protein_coding MGP_LPJ_T0077250.1 MGP_LPJ_G0030622.1 mouse_genomes_project 6 48011496 48012424 + Gpnmb protein_coding retained_intron MGP_LPJ_T0015374.1 MGP_LPJ_G0013465.1 mouse_genomes_project 6 68196075 68196772 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099661.1 MGP_LPJ_G0037924.1 mouse_genomes_project 6 95476938 95477044 + Gm23035 snRNA snRNA MGP_LPJ_T0015505.1 MGP_LPJ_G0013596.1 mouse_genomes_project 6 117338438 117343165 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015582.1 MGP_LPJ_G0013673.1 mouse_genomes_project 6 135677400 135679258 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008515.1 MGP_LPJ_G0006897.1 mouse_genomes_project 6 3820673 3832502 - lincRNA lincRNA MGP_LPJ_T0080603.1 MGP_LPJ_G0031364.1 mouse_genomes_project 6 147154157 147202284 - MGP_LPJ_P0080603 protein_coding nonsense_mediated_decay MGP_LPJ_T0080604.1 MGP_LPJ_G0031364.1 mouse_genomes_project 6 147154157 147248971 - MGP_LPJ_P0080604 protein_coding protein_coding MGP_LPJ_T0080605.1 MGP_LPJ_G0031364.1 mouse_genomes_project 6 147154157 147205528 - MGP_LPJ_P0080605 protein_coding protein_coding MGP_LPJ_T0080606.1 MGP_LPJ_G0031364.1 mouse_genomes_project 6 147166513 147205528 - protein_coding retained_intron MGP_LPJ_T0080607.1 MGP_LPJ_G0031364.1 mouse_genomes_project 6 147179075 147248938 - MGP_LPJ_P0080607 protein_coding protein_coding MGP_LPJ_T0015378.1 MGP_LPJ_G0013469.1 mouse_genomes_project 6 68808647 68809134 - processed_pseudogene processed_pseudogene MGP_LPJ_T0077177.1 MGP_LPJ_G0030603.1 mouse_genomes_project 6 47526778 47531984 + MGP_LPJ_P0077177 Repin1 protein_coding protein_coding MGP_LPJ_T0077178.1 MGP_LPJ_G0030603.1 mouse_genomes_project 6 47526778 47531984 + MGP_LPJ_P0077178 Repin1 protein_coding protein_coding MGP_LPJ_T0077179.1 MGP_LPJ_G0030603.1 mouse_genomes_project 6 47526778 47530290 + MGP_LPJ_P0077179 Repin1 protein_coding protein_coding MGP_LPJ_T0077180.1 MGP_LPJ_G0030603.1 mouse_genomes_project 6 47526786 47531985 + MGP_LPJ_P0077180 Repin1 protein_coding protein_coding MGP_LPJ_T0077181.1 MGP_LPJ_G0030603.1 mouse_genomes_project 6 47526795 47531984 + MGP_LPJ_P0077181 Repin1 protein_coding protein_coding MGP_LPJ_T0077182.1 MGP_LPJ_G0030603.1 mouse_genomes_project 6 47526835 47528229 + Repin1 protein_coding retained_intron MGP_LPJ_T0077185.1 MGP_LPJ_G0030603.1 mouse_genomes_project 6 47527214 47529526 + Repin1 protein_coding retained_intron MGP_LPJ_T0002198.1 MGP_LPJ_G0002107.1 mouse_genomes_project 6 145473485 145475839 - TEC TEC MGP_LPJ_T0080303.1 MGP_LPJ_G0031290.1 mouse_genomes_project 6 137025563 137026493 + MGP_LPJ_P0080303 Tas2r124 protein_coding protein_coding MGP_LPJ_T0080256.1 MGP_LPJ_G0031260.1 mouse_genomes_project 6 133725978 133755496 - MGP_LPJ_P0080256 Klra17 protein_coding protein_coding MGP_LPJ_T0080257.1 MGP_LPJ_G0031260.1 mouse_genomes_project 6 133725988 133755498 - MGP_LPJ_P0080257 Klra17 protein_coding protein_coding MGP_LPJ_T0080023.1 MGP_LPJ_G0031197.1 mouse_genomes_project 6 128970264 129005746 - MGP_LPJ_P0080023 Cd9 protein_coding protein_coding MGP_LPJ_T0080024.1 MGP_LPJ_G0031197.1 mouse_genomes_project 6 128970587 128988375 - Cd9 protein_coding processed_transcript MGP_LPJ_T0080025.1 MGP_LPJ_G0031197.1 mouse_genomes_project 6 128972114 128973017 - Cd9 protein_coding retained_intron MGP_LPJ_T0076888.1 MGP_LPJ_G0030508.1 mouse_genomes_project 6 38238184 38251117 - MGP_LPJ_P0076888 Mrps33 protein_coding protein_coding MGP_LPJ_T0076889.1 MGP_LPJ_G0030508.1 mouse_genomes_project 6 38238572 38251014 - MGP_LPJ_P0076889 Mrps33 protein_coding protein_coding MGP_LPJ_T0076890.1 MGP_LPJ_G0030508.1 mouse_genomes_project 6 38238764 38245178 - MGP_LPJ_P0076890 Mrps33 protein_coding protein_coding MGP_LPJ_T0076891.1 MGP_LPJ_G0030508.1 mouse_genomes_project 6 38244377 38251022 - Mrps33 protein_coding retained_intron MGP_LPJ_T0002586.1 MGP_LPJ_G0002485.1 mouse_genomes_project 6 40050843 40050893 + MGP_LPJ_P0002586 Trbj1-3 TR_J_gene TR_J_gene MGP_LPJ_T0002587.1 MGP_LPJ_G0002485.1 mouse_genomes_project 6 40050843 40050897 + Trbj1-3 TR_J_gene processed_transcript MGP_LPJ_T0076131.1 MGP_LPJ_G0030367.1 mouse_genomes_project 6 10907167 10910951 - MGP_LPJ_P0076131 2610001J05Rik protein_coding protein_coding MGP_LPJ_T0076132.1 MGP_LPJ_G0030367.1 mouse_genomes_project 6 10909232 10910899 - MGP_LPJ_P0076132 2610001J05Rik protein_coding protein_coding MGP_LPJ_T0076133.1 MGP_LPJ_G0030367.1 mouse_genomes_project 6 10909292 10910898 - MGP_LPJ_P0076133 2610001J05Rik protein_coding protein_coding MGP_LPJ_T0076134.1 MGP_LPJ_G0030367.1 mouse_genomes_project 6 10909433 10910898 - MGP_LPJ_P0076134 2610001J05Rik protein_coding protein_coding MGP_LPJ_T0002134.1 MGP_LPJ_G0002044.1 mouse_genomes_project 6 103478387 103479346 - TEC TEC MGP_LPJ_T0005090.1 MGP_LPJ_G0004341.1 mouse_genomes_project 6 116284491 116285642 + Gm26982 antisense antisense MGP_LPJ_T0077256.1 MGP_LPJ_G0030624.1 mouse_genomes_project 6 48052334 48191470 - MGP_LPJ_P0077256 Igf2bp3 protein_coding protein_coding MGP_LPJ_T0077257.1 MGP_LPJ_G0030624.1 mouse_genomes_project 6 48055238 48061322 - Igf2bp3 protein_coding retained_intron MGP_LPJ_T0077258.1 MGP_LPJ_G0030624.1 mouse_genomes_project 6 48060221 48190674 - Igf2bp3 protein_coding retained_intron MGP_LPJ_T0077259.1 MGP_LPJ_G0030624.1 mouse_genomes_project 6 48077477 48081178 - Igf2bp3 protein_coding processed_transcript MGP_LPJ_T0077260.1 MGP_LPJ_G0030624.1 mouse_genomes_project 6 48137287 48191217 - Igf2bp3 protein_coding processed_transcript MGP_LPJ_T0015502.1 MGP_LPJ_G0013593.1 mouse_genomes_project 6 116631899 116631975 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015429.1 MGP_LPJ_G0013520.1 mouse_genomes_project 6 86264973 86265913 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008696.1 MGP_LPJ_G0007028.1 mouse_genomes_project 6 96708029 96715710 + 4930511E03Rik lincRNA lincRNA MGP_LPJ_T0100885.1 MGP_LPJ_G0039148.1 mouse_genomes_project 6 47894114 47894244 + Gm24348 snoRNA snoRNA MGP_LPJ_T0079777.1 MGP_LPJ_G0031156.1 mouse_genomes_project 6 128058582 128070034 - MGP_LPJ_P0079777 protein_coding protein_coding MGP_LPJ_T0077057.1 MGP_LPJ_G0030575.1 mouse_genomes_project 6 41731976 41737968 + MGP_LPJ_P0077057 Olfr437 protein_coding protein_coding MGP_LPJ_T0077058.1 MGP_LPJ_G0030575.1 mouse_genomes_project 6 41736950 41737968 + MGP_LPJ_P0077058 Olfr437 protein_coding protein_coding MGP_LPJ_T0077576.1 MGP_LPJ_G0030711.1 mouse_genomes_project 6 57386871 57387868 - MGP_LPJ_P0077576 Vmn1r23 protein_coding protein_coding MGP_LPJ_T0080169.1 MGP_LPJ_G0031229.1 mouse_genomes_project 6 132352976 132366895 - MGP_LPJ_P0080169 Klrb1a protein_coding protein_coding MGP_LPJ_T0079794.1 MGP_LPJ_G0031159.1 mouse_genomes_project 6 128183060 128184595 + Phb2 protein_coding retained_intron MGP_LPJ_T0079795.1 MGP_LPJ_G0031159.1 mouse_genomes_project 6 128183060 128183793 + Phb2 protein_coding retained_intron MGP_LPJ_T0079796.1 MGP_LPJ_G0031159.1 mouse_genomes_project 6 128183060 128187675 + Phb2 protein_coding retained_intron MGP_LPJ_T0079797.1 MGP_LPJ_G0031159.1 mouse_genomes_project 6 128183060 128187675 + MGP_LPJ_P0079797 Phb2 protein_coding protein_coding MGP_LPJ_T0079798.1 MGP_LPJ_G0031159.1 mouse_genomes_project 6 128183490 128185525 + MGP_LPJ_P0079798 Phb2 protein_coding protein_coding MGP_LPJ_T0079799.1 MGP_LPJ_G0031159.1 mouse_genomes_project 6 128183846 128187365 + MGP_LPJ_P0079799 Phb2 protein_coding protein_coding MGP_LPJ_T0079800.1 MGP_LPJ_G0031159.1 mouse_genomes_project 6 128186072 128187675 + Phb2 protein_coding retained_intron MGP_LPJ_T0079801.1 MGP_LPJ_G0031159.1 mouse_genomes_project 6 128186087 128187264 + Phb2 protein_coding processed_transcript MGP_LPJ_T0005107.1 MGP_LPJ_G0004358.1 mouse_genomes_project 6 128991628 128994938 + Gm28809 antisense antisense MGP_LPJ_T0005108.1 MGP_LPJ_G0004358.1 mouse_genomes_project 6 128992209 128993875 + Gm28809 antisense antisense MGP_LPJ_T0002020.1 MGP_LPJ_G0001930.1 mouse_genomes_project 6 56178235 56179825 + TEC TEC MGP_LPJ_T0011655.1 MGP_LPJ_G0009773.1 mouse_genomes_project 6 51381229 51381443 + Gm27861 misc_RNA misc_RNA MGP_LPJ_T0018240.1 MGP_LPJ_G0015557.1 mouse_genomes_project 6 73082028 73089886 + Gm20536 processed_transcript processed_transcript MGP_LPJ_T0005042.1 MGP_LPJ_G0004310.1 mouse_genomes_project 6 88638655 88640661 + Gm44418 antisense antisense MGP_LPJ_T0015511.1 MGP_LPJ_G0013602.1 mouse_genomes_project 6 119158720 119159240 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000336.1 MGP_LPJ_G0000274.1 mouse_genomes_project 6 68841026 68841437 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0011687.1 MGP_LPJ_G0009805.1 mouse_genomes_project 6 146839418 146839637 - Gm22036 misc_RNA misc_RNA MGP_LPJ_T0018255.1 MGP_LPJ_G0015563.1 mouse_genomes_project 6 125806734 125818353 - Gm16556 processed_transcript processed_transcript MGP_LPJ_T0018256.1 MGP_LPJ_G0015563.1 mouse_genomes_project 6 125806760 125818329 - Gm16556 processed_transcript processed_transcript MGP_LPJ_T0080929.1 MGP_LPJ_G0031417.1 mouse_genomes_project 6 154669970 154680814 + Bicd1 protein_coding retained_intron MGP_LPJ_T0080930.1 MGP_LPJ_G0031417.1 mouse_genomes_project 6 154670068 154836093 + MGP_LPJ_P0080930 Bicd1 protein_coding protein_coding MGP_LPJ_T0080931.1 MGP_LPJ_G0031417.1 mouse_genomes_project 6 154670100 154829984 + MGP_LPJ_P0080931 Bicd1 protein_coding protein_coding MGP_LPJ_T0080932.1 MGP_LPJ_G0031417.1 mouse_genomes_project 6 154670153 154767675 + Bicd1 protein_coding retained_intron MGP_LPJ_T0080933.1 MGP_LPJ_G0031417.1 mouse_genomes_project 6 154670513 154828886 + MGP_LPJ_P0080933 Bicd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0080934.1 MGP_LPJ_G0031417.1 mouse_genomes_project 6 154670513 154828886 + MGP_LPJ_P0080934 Bicd1 protein_coding protein_coding MGP_LPJ_T0080935.1 MGP_LPJ_G0031417.1 mouse_genomes_project 6 154778322 154783609 + Bicd1 protein_coding retained_intron MGP_LPJ_T0080936.1 MGP_LPJ_G0031417.1 mouse_genomes_project 6 154781422 154785702 + MGP_LPJ_P0080936 Bicd1 protein_coding protein_coding MGP_LPJ_T0080937.1 MGP_LPJ_G0031417.1 mouse_genomes_project 6 154810871 154831022 + Bicd1 protein_coding retained_intron MGP_LPJ_T0078144.1 MGP_LPJ_G0030833.1 mouse_genomes_project 6 84669889 84683834 - MGP_LPJ_P0078144 protein_coding protein_coding MGP_LPJ_T0078145.1 MGP_LPJ_G0030833.1 mouse_genomes_project 6 84670558 84683679 - MGP_LPJ_P0078145 protein_coding unknown_likely_coding MGP_LPJ_T0078146.1 MGP_LPJ_G0030833.1 mouse_genomes_project 6 84670564 84683768 - protein_coding processed_transcript MGP_LPJ_T0100872.1 MGP_LPJ_G0039135.1 mouse_genomes_project 6 11169185 11169301 + Gm23760 snoRNA snoRNA MGP_LPJ_T0078826.1 MGP_LPJ_G0030972.1 mouse_genomes_project 6 98994517 99037014 - MGP_LPJ_P0078826 Tmf1 protein_coding protein_coding MGP_LPJ_T0078827.1 MGP_LPJ_G0030972.1 mouse_genomes_project 6 99004533 99036929 - MGP_LPJ_P0078827 Tmf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078828.1 MGP_LPJ_G0030972.1 mouse_genomes_project 6 99018103 99026598 - Tmf1 protein_coding processed_transcript MGP_LPJ_T0078837.1 MGP_LPJ_G0030976.1 mouse_genomes_project 6 99162213 99166433 - Frmd4b protein_coding retained_intron MGP_LPJ_T0078838.1 MGP_LPJ_G0030976.1 mouse_genomes_project 6 99162263 99189544 - Frmd4b protein_coding processed_transcript MGP_LPJ_T0078839.1 MGP_LPJ_G0030976.1 mouse_genomes_project 6 99162269 99338037 - MGP_LPJ_P0078839 Frmd4b protein_coding protein_coding MGP_LPJ_T0078840.1 MGP_LPJ_G0030976.1 mouse_genomes_project 6 99163541 99367895 - MGP_LPJ_P0078840 Frmd4b protein_coding protein_coding MGP_LPJ_T0078841.1 MGP_LPJ_G0030976.1 mouse_genomes_project 6 99182735 99189594 - Frmd4b protein_coding retained_intron MGP_LPJ_T0078842.1 MGP_LPJ_G0030976.1 mouse_genomes_project 6 99183659 99202148 - Frmd4b protein_coding processed_transcript MGP_LPJ_T0078843.1 MGP_LPJ_G0030976.1 mouse_genomes_project 6 99184213 99233892 - Frmd4b protein_coding retained_intron MGP_LPJ_T0078844.1 MGP_LPJ_G0030976.1 mouse_genomes_project 6 99201665 99272841 - Frmd4b protein_coding processed_transcript MGP_LPJ_T0078845.1 MGP_LPJ_G0030976.1 mouse_genomes_project 6 99202323 99367944 - Frmd4b protein_coding processed_transcript MGP_LPJ_T0078846.1 MGP_LPJ_G0030976.1 mouse_genomes_project 6 99230647 99499043 - Frmd4b protein_coding retained_intron MGP_LPJ_T0078847.1 MGP_LPJ_G0030976.1 mouse_genomes_project 6 99271893 99272809 - Frmd4b protein_coding retained_intron MGP_LPJ_T0078848.1 MGP_LPJ_G0030976.1 mouse_genomes_project 6 99272361 99309694 - MGP_LPJ_P0078848 Frmd4b protein_coding protein_coding MGP_LPJ_T0001967.1 MGP_LPJ_G0001877.1 mouse_genomes_project 6 26444086 26446984 + TEC TEC MGP_LPJ_T0076976.1 MGP_LPJ_G0030544.1 mouse_genomes_project 6 40512918 40521325 + MGP_LPJ_P0076976 Sva protein_coding protein_coding MGP_LPJ_T0076977.1 MGP_LPJ_G0030544.1 mouse_genomes_project 6 40512918 40521331 + MGP_LPJ_P0076977 Sva protein_coding protein_coding MGP_LPJ_T0080634.1 MGP_LPJ_G0031371.1 mouse_genomes_project 6 147418190 147441161 - MGP_LPJ_P0080634 Ldhb protein_coding protein_coding MGP_LPJ_T0080635.1 MGP_LPJ_G0031371.1 mouse_genomes_project 6 147418190 147423579 - MGP_LPJ_P0080635 Ldhb protein_coding protein_coding MGP_LPJ_T0080636.1 MGP_LPJ_G0031371.1 mouse_genomes_project 6 147418277 147434579 - MGP_LPJ_P0080636 Ldhb protein_coding protein_coding MGP_LPJ_T0080637.1 MGP_LPJ_G0031371.1 mouse_genomes_project 6 147423498 147441009 - MGP_LPJ_P0080637 Ldhb protein_coding protein_coding MGP_LPJ_T0078758.1 MGP_LPJ_G0030956.1 mouse_genomes_project 6 93770550 93803935 - MGP_LPJ_P0078758 Rbsn protein_coding protein_coding MGP_LPJ_T0078759.1 MGP_LPJ_G0030956.1 mouse_genomes_project 6 93773679 93784119 - MGP_LPJ_P0078759 Rbsn protein_coding protein_coding MGP_LPJ_T0078760.1 MGP_LPJ_G0030956.1 mouse_genomes_project 6 93774221 93786022 - Rbsn protein_coding processed_transcript MGP_LPJ_T0078761.1 MGP_LPJ_G0030956.1 mouse_genomes_project 6 93774584 93777967 - Rbsn protein_coding retained_intron MGP_LPJ_T0078762.1 MGP_LPJ_G0030956.1 mouse_genomes_project 6 93794576 93803859 - MGP_LPJ_P0078762 Rbsn protein_coding protein_coding MGP_LPJ_T0078763.1 MGP_LPJ_G0030956.1 mouse_genomes_project 6 93798963 93803579 - MGP_LPJ_P0078763 Rbsn protein_coding protein_coding MGP_LPJ_T0015528.1 MGP_LPJ_G0013619.1 mouse_genomes_project 6 124494274 124494662 + processed_pseudogene processed_pseudogene MGP_LPJ_T0080414.1 MGP_LPJ_G0031326.1 mouse_genomes_project 6 140938434 140961743 - MGP_LPJ_P0080414 E330021D16Rik protein_coding protein_coding MGP_LPJ_T0080415.1 MGP_LPJ_G0031326.1 mouse_genomes_project 6 140938834 140939950 - MGP_LPJ_P0080415 E330021D16Rik protein_coding protein_coding MGP_LPJ_T0080416.1 MGP_LPJ_G0031326.1 mouse_genomes_project 6 140939614 140961738 - MGP_LPJ_P0080416 E330021D16Rik protein_coding protein_coding MGP_LPJ_T0001946.1 MGP_LPJ_G0001856.1 mouse_genomes_project 6 3728678 3730032 - TEC TEC MGP_LPJ_T0077229.1 MGP_LPJ_G0030617.1 mouse_genomes_project 6 47796269 47797681 + MGP_LPJ_P0077229 Tmem176a protein_coding protein_coding MGP_LPJ_T0077230.1 MGP_LPJ_G0030617.1 mouse_genomes_project 6 47796862 47801220 + MGP_LPJ_P0077230 Tmem176a protein_coding protein_coding MGP_LPJ_T0077231.1 MGP_LPJ_G0030617.1 mouse_genomes_project 6 47796872 47804152 + MGP_LPJ_P0077231 Tmem176a protein_coding nonsense_mediated_decay MGP_LPJ_T0077232.1 MGP_LPJ_G0030617.1 mouse_genomes_project 6 47796898 47800712 + Tmem176a protein_coding retained_intron MGP_LPJ_T0077233.1 MGP_LPJ_G0030617.1 mouse_genomes_project 6 47796933 47800716 + MGP_LPJ_P0077233 Tmem176a protein_coding protein_coding MGP_LPJ_T0077234.1 MGP_LPJ_G0030617.1 mouse_genomes_project 6 47797120 47800126 + MGP_LPJ_P0077234 Tmem176a protein_coding protein_coding MGP_LPJ_T0077235.1 MGP_LPJ_G0030617.1 mouse_genomes_project 6 47797939 47798943 + MGP_LPJ_P0077235 Tmem176a protein_coding protein_coding MGP_LPJ_T0010802.1 MGP_LPJ_G0008920.1 mouse_genomes_project 6 86488697 86488779 - Mir705 miRNA miRNA MGP_LPJ_T0077545.1 MGP_LPJ_G0030695.1 mouse_genomes_project 6 56677489 56678392 + MGP_LPJ_P0077545 Vmn1r13 protein_coding protein_coding MGP_LPJ_T0015308.1 MGP_LPJ_G0013399.1 mouse_genomes_project 6 52302780 52303320 + processed_pseudogene processed_pseudogene MGP_LPJ_T0080267.1 MGP_LPJ_G0031270.1 mouse_genomes_project 6 135454535 135482116 - MGP_LPJ_P0080267 Klra2 protein_coding protein_coding MGP_LPJ_T0080268.1 MGP_LPJ_G0031270.1 mouse_genomes_project 6 135455308 135482116 - MGP_LPJ_P0080268 Klra2 protein_coding protein_coding MGP_LPJ_T0015276.1 MGP_LPJ_G0013367.1 mouse_genomes_project 6 45499422 45499870 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008628.1 MGP_LPJ_G0006974.1 mouse_genomes_project 6 59730662 59821646 + lincRNA lincRNA MGP_LPJ_T0008629.1 MGP_LPJ_G0006974.1 mouse_genomes_project 6 59730704 59734567 + lincRNA lincRNA MGP_LPJ_T0008640.1 MGP_LPJ_G0006984.1 mouse_genomes_project 6 71691266 71700374 + Gm1070 lincRNA lincRNA MGP_LPJ_T0079429.1 MGP_LPJ_G0031083.1 mouse_genomes_project 6 121165200 121203573 - MGP_LPJ_P0079429 Bms1 protein_coding protein_coding MGP_LPJ_T0079430.1 MGP_LPJ_G0031083.1 mouse_genomes_project 6 121180401 121203503 - Bms1 protein_coding retained_intron MGP_LPJ_T0079431.1 MGP_LPJ_G0031083.1 mouse_genomes_project 6 121197932 121203511 - Bms1 protein_coding processed_transcript MGP_LPJ_T0078977.1 MGP_LPJ_G0031000.1 mouse_genomes_project 6 110998760 111005130 + MGP_LPJ_P0078977 Bhlhe40 protein_coding protein_coding MGP_LPJ_T0078978.1 MGP_LPJ_G0031000.1 mouse_genomes_project 6 110998930 110999466 + Bhlhe40 protein_coding retained_intron MGP_LPJ_T0078979.1 MGP_LPJ_G0031000.1 mouse_genomes_project 6 110999005 111000832 + MGP_LPJ_P0078979 Bhlhe40 protein_coding protein_coding MGP_LPJ_T0078980.1 MGP_LPJ_G0031000.1 mouse_genomes_project 6 111001250 111003870 + Bhlhe40 protein_coding retained_intron MGP_LPJ_T0077251.1 MGP_LPJ_G0030623.1 mouse_genomes_project 6 48039841 48053863 + MGP_LPJ_P0077251 Malsu1 protein_coding protein_coding MGP_LPJ_T0077252.1 MGP_LPJ_G0030623.1 mouse_genomes_project 6 48039894 48053863 + MGP_LPJ_P0077252 Malsu1 protein_coding nonsense_mediated_decay MGP_LPJ_T0077253.1 MGP_LPJ_G0030623.1 mouse_genomes_project 6 48039938 48047241 + Malsu1 protein_coding processed_transcript MGP_LPJ_T0077254.1 MGP_LPJ_G0030623.1 mouse_genomes_project 6 48040120 48050646 + Malsu1 protein_coding processed_transcript MGP_LPJ_T0077255.1 MGP_LPJ_G0030623.1 mouse_genomes_project 6 48049696 48051790 + Malsu1 protein_coding retained_intron MGP_LPJ_T0000352.1 MGP_LPJ_G0000290.1 mouse_genomes_project 6 70028687 70029137 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0080891.1 MGP_LPJ_G0031413.1 mouse_genomes_project 6 154243295 154359417 - MGP_LPJ_P0080891 Dennd5b protein_coding protein_coding MGP_LPJ_T0080892.1 MGP_LPJ_G0031413.1 mouse_genomes_project 6 154271676 154275016 - Dennd5b protein_coding retained_intron MGP_LPJ_T0080893.1 MGP_LPJ_G0031413.1 mouse_genomes_project 6 154271814 154359275 - Dennd5b protein_coding retained_intron MGP_LPJ_T0080894.1 MGP_LPJ_G0031413.1 mouse_genomes_project 6 154295982 154300755 - Dennd5b protein_coding retained_intron MGP_LPJ_T0080895.1 MGP_LPJ_G0031413.1 mouse_genomes_project 6 154326424 154338980 - MGP_LPJ_P0080895 Dennd5b protein_coding protein_coding MGP_LPJ_T0080896.1 MGP_LPJ_G0031413.1 mouse_genomes_project 6 154326447 154359321 - MGP_LPJ_P0080896 Dennd5b protein_coding protein_coding MGP_LPJ_T0080897.1 MGP_LPJ_G0031413.1 mouse_genomes_project 6 154340064 154343043 - Dennd5b protein_coding retained_intron MGP_LPJ_T0102209.1 MGP_LPJ_G0040246.1 mouse_genomes_project 6 32581764 32592670 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0079245.1 MGP_LPJ_G0031047.1 mouse_genomes_project 6 117991080 118126805 + MGP_LPJ_P0079245 Pparg protein_coding protein_coding MGP_LPJ_T0079246.1 MGP_LPJ_G0031047.1 mouse_genomes_project 6 117992421 118126800 + MGP_LPJ_P0079246 Pparg protein_coding protein_coding MGP_LPJ_T0079247.1 MGP_LPJ_G0031047.1 mouse_genomes_project 6 117992478 118076201 + MGP_LPJ_P0079247 Pparg protein_coding protein_coding MGP_LPJ_T0079248.1 MGP_LPJ_G0031047.1 mouse_genomes_project 6 117992479 118013966 + Pparg protein_coding retained_intron MGP_LPJ_T0079249.1 MGP_LPJ_G0031047.1 mouse_genomes_project 6 118013846 118099085 + MGP_LPJ_P0079249 Pparg protein_coding protein_coding MGP_LPJ_T0079250.1 MGP_LPJ_G0031047.1 mouse_genomes_project 6 118055158 118126805 + MGP_LPJ_P0079250 Pparg protein_coding protein_coding MGP_LPJ_T0079251.1 MGP_LPJ_G0031047.1 mouse_genomes_project 6 118074618 118099461 + Pparg protein_coding retained_intron MGP_LPJ_T0076030.1 MGP_LPJ_G0030345.1 mouse_genomes_project 6 3728215 3732211 + MGP_LPJ_P0076030 Dlx6 protein_coding protein_coding MGP_LPJ_T0076031.1 MGP_LPJ_G0030345.1 mouse_genomes_project 6 3728215 3733001 + MGP_LPJ_P0076031 Dlx6 protein_coding protein_coding MGP_LPJ_T0076032.1 MGP_LPJ_G0030345.1 mouse_genomes_project 6 3728593 3732211 + MGP_LPJ_P0076032 Dlx6 protein_coding protein_coding MGP_LPJ_T0076033.1 MGP_LPJ_G0030345.1 mouse_genomes_project 6 3728679 3730312 + Dlx6 protein_coding retained_intron MGP_LPJ_T0015460.1 MGP_LPJ_G0013551.1 mouse_genomes_project 6 99328505 99330242 + processed_pseudogene processed_pseudogene MGP_LPJ_T0077329.1 MGP_LPJ_G0030639.1 mouse_genomes_project 6 50683593 50759559 + MGP_LPJ_P0077329 Snx10 protein_coding protein_coding MGP_LPJ_T0077330.1 MGP_LPJ_G0030639.1 mouse_genomes_project 6 50683661 50738040 + Snx10 protein_coding retained_intron MGP_LPJ_T0077331.1 MGP_LPJ_G0030639.1 mouse_genomes_project 6 50685960 50748631 + MGP_LPJ_P0077331 Snx10 protein_coding protein_coding MGP_LPJ_T0077332.1 MGP_LPJ_G0030639.1 mouse_genomes_project 6 50685985 50757316 + MGP_LPJ_P0077332 Snx10 protein_coding protein_coding MGP_LPJ_T0077333.1 MGP_LPJ_G0030639.1 mouse_genomes_project 6 50708780 50759550 + MGP_LPJ_P0077333 Snx10 protein_coding protein_coding MGP_LPJ_T0077334.1 MGP_LPJ_G0030639.1 mouse_genomes_project 6 50708781 50757952 + MGP_LPJ_P0077334 Snx10 protein_coding protein_coding MGP_LPJ_T0077335.1 MGP_LPJ_G0030639.1 mouse_genomes_project 6 50708823 50757923 + MGP_LPJ_P0077335 Snx10 protein_coding nonsense_mediated_decay MGP_LPJ_T0078829.1 MGP_LPJ_G0030973.1 mouse_genomes_project 6 99041544 99068612 - MGP_LPJ_P0078829 Uba3 protein_coding protein_coding MGP_LPJ_T0078830.1 MGP_LPJ_G0030973.1 mouse_genomes_project 6 99041692 99068611 - MGP_LPJ_P0078830 Uba3 protein_coding nonsense_mediated_decay MGP_LPJ_T0078831.1 MGP_LPJ_G0030973.1 mouse_genomes_project 6 99041881 99068699 - MGP_LPJ_P0078831 Uba3 protein_coding protein_coding MGP_LPJ_T0078832.1 MGP_LPJ_G0030973.1 mouse_genomes_project 6 99057067 99059245 - Uba3 protein_coding retained_intron MGP_LPJ_T0078833.1 MGP_LPJ_G0030973.1 mouse_genomes_project 6 99066065 99068617 - Uba3 protein_coding retained_intron MGP_LPJ_T0078834.1 MGP_LPJ_G0030973.1 mouse_genomes_project 6 99067142 99068620 - Uba3 protein_coding retained_intron MGP_LPJ_T0079964.1 MGP_LPJ_G0031185.1 mouse_genomes_project 6 128640827 128658229 + Iffo1 protein_coding retained_intron MGP_LPJ_T0079965.1 MGP_LPJ_G0031185.1 mouse_genomes_project 6 128640827 128658229 + MGP_LPJ_P0079965 Iffo1 protein_coding protein_coding MGP_LPJ_T0079966.1 MGP_LPJ_G0031185.1 mouse_genomes_project 6 128640827 128658229 + MGP_LPJ_P0079966 Iffo1 protein_coding nonsense_mediated_decay MGP_LPJ_T0079967.1 MGP_LPJ_G0031185.1 mouse_genomes_project 6 128640837 128658223 + MGP_LPJ_P0079967 Iffo1 protein_coding protein_coding MGP_LPJ_T0079968.1 MGP_LPJ_G0031185.1 mouse_genomes_project 6 128640852 128658223 + Iffo1 protein_coding retained_intron MGP_LPJ_T0079969.1 MGP_LPJ_G0031185.1 mouse_genomes_project 6 128641387 128658223 + MGP_LPJ_P0079969 Iffo1 protein_coding protein_coding MGP_LPJ_T0079970.1 MGP_LPJ_G0031185.1 mouse_genomes_project 6 128641612 128658223 + Iffo1 protein_coding retained_intron MGP_LPJ_T0079971.1 MGP_LPJ_G0031185.1 mouse_genomes_project 6 128644596 128647092 + Iffo1 protein_coding processed_transcript MGP_LPJ_T0079972.1 MGP_LPJ_G0031185.1 mouse_genomes_project 6 128645117 128648335 + Iffo1 protein_coding retained_intron MGP_LPJ_T0079973.1 MGP_LPJ_G0031185.1 mouse_genomes_project 6 128648952 128657504 + Iffo1 protein_coding retained_intron MGP_LPJ_T0005074.1 MGP_LPJ_G0004331.1 mouse_genomes_project 6 104417894 104461236 + Gm44188 antisense antisense MGP_LPJ_T0005075.1 MGP_LPJ_G0004331.1 mouse_genomes_project 6 104417916 104493085 + Gm44188 antisense antisense MGP_LPJ_T0079741.1 MGP_LPJ_G0031142.1 mouse_genomes_project 6 126610207 126618289 - MGP_LPJ_P0079741 Clec4e protein_coding protein_coding MGP_LPJ_T0079742.1 MGP_LPJ_G0031142.1 mouse_genomes_project 6 126610367 126618288 - Clec4e protein_coding retained_intron MGP_LPJ_T0079743.1 MGP_LPJ_G0031142.1 mouse_genomes_project 6 126610563 126618289 - Clec4e protein_coding retained_intron MGP_LPJ_T0079744.1 MGP_LPJ_G0031142.1 mouse_genomes_project 6 126611086 126618289 - Clec4e protein_coding retained_intron MGP_LPJ_T0079745.1 MGP_LPJ_G0031142.1 mouse_genomes_project 6 126611909 126618289 - MGP_LPJ_P0079745 Clec4e protein_coding protein_coding MGP_LPJ_T0079746.1 MGP_LPJ_G0031142.1 mouse_genomes_project 6 126612112 126618285 - MGP_LPJ_P0079746 Clec4e protein_coding nonsense_mediated_decay MGP_LPJ_T0079747.1 MGP_LPJ_G0031142.1 mouse_genomes_project 6 126616195 126618289 - Clec4e protein_coding processed_transcript MGP_LPJ_T0008771.1 MGP_LPJ_G0007086.1 mouse_genomes_project 6 140180956 140192375 + Gm14329 lincRNA lincRNA MGP_LPJ_T0076479.1 MGP_LPJ_G0030436.1 mouse_genomes_project 6 27733609 27734326 + MGP_LPJ_P0076479 Ahcyl2 protein_coding protein_coding MGP_LPJ_T0076480.1 MGP_LPJ_G0030436.1 mouse_genomes_project 6 27734041 27841271 + Ahcyl2 protein_coding retained_intron MGP_LPJ_T0076481.1 MGP_LPJ_G0030436.1 mouse_genomes_project 6 27734090 27888199 + MGP_LPJ_P0076481 Ahcyl2 protein_coding protein_coding MGP_LPJ_T0076482.1 MGP_LPJ_G0030436.1 mouse_genomes_project 6 27734096 27736242 + Ahcyl2 protein_coding retained_intron MGP_LPJ_T0076483.1 MGP_LPJ_G0030436.1 mouse_genomes_project 6 27734126 27844570 + MGP_LPJ_P0076483 Ahcyl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0076484.1 MGP_LPJ_G0030436.1 mouse_genomes_project 6 27734136 27888205 + MGP_LPJ_P0076484 Ahcyl2 protein_coding protein_coding MGP_LPJ_T0076485.1 MGP_LPJ_G0030436.1 mouse_genomes_project 6 27772734 27857646 + MGP_LPJ_P0076485 Ahcyl2 protein_coding protein_coding MGP_LPJ_T0076486.1 MGP_LPJ_G0030436.1 mouse_genomes_project 6 27827611 27885104 + MGP_LPJ_P0076486 Ahcyl2 protein_coding protein_coding MGP_LPJ_T0076487.1 MGP_LPJ_G0030436.1 mouse_genomes_project 6 27827618 27837088 + MGP_LPJ_P0076487 Ahcyl2 protein_coding protein_coding MGP_LPJ_T0076488.1 MGP_LPJ_G0030436.1 mouse_genomes_project 6 27827620 27844582 + MGP_LPJ_P0076488 Ahcyl2 protein_coding protein_coding MGP_LPJ_T0076489.1 MGP_LPJ_G0030436.1 mouse_genomes_project 6 27827625 27854552 + MGP_LPJ_P0076489 Ahcyl2 protein_coding protein_coding MGP_LPJ_T0076490.1 MGP_LPJ_G0030436.1 mouse_genomes_project 6 27827742 27841271 + Ahcyl2 protein_coding retained_intron MGP_LPJ_T0076491.1 MGP_LPJ_G0030436.1 mouse_genomes_project 6 27833230 27888193 + MGP_LPJ_P0076491 Ahcyl2 protein_coding protein_coding MGP_LPJ_T0076492.1 MGP_LPJ_G0030436.1 mouse_genomes_project 6 27833536 27857655 + MGP_LPJ_P0076492 Ahcyl2 protein_coding protein_coding MGP_LPJ_T0076493.1 MGP_LPJ_G0030436.1 mouse_genomes_project 6 27833561 27857648 + MGP_LPJ_P0076493 Ahcyl2 protein_coding protein_coding MGP_LPJ_T0076494.1 MGP_LPJ_G0030436.1 mouse_genomes_project 6 27839238 27845172 + Ahcyl2 protein_coding processed_transcript MGP_LPJ_T0076495.1 MGP_LPJ_G0030436.1 mouse_genomes_project 6 27844245 27888198 + Ahcyl2 protein_coding retained_intron MGP_LPJ_T0076496.1 MGP_LPJ_G0030436.1 mouse_genomes_project 6 27850641 27853042 + Ahcyl2 protein_coding retained_intron MGP_LPJ_T0076497.1 MGP_LPJ_G0030436.1 mouse_genomes_project 6 27868574 27870980 + Ahcyl2 protein_coding retained_intron MGP_LPJ_T0076498.1 MGP_LPJ_G0030436.1 mouse_genomes_project 6 27871104 27884944 + Ahcyl2 protein_coding retained_intron MGP_LPJ_T0076499.1 MGP_LPJ_G0030436.1 mouse_genomes_project 6 27877809 27885096 + Ahcyl2 protein_coding processed_transcript MGP_LPJ_T0076500.1 MGP_LPJ_G0030436.1 mouse_genomes_project 6 27878281 27885040 + Ahcyl2 protein_coding processed_transcript MGP_LPJ_T0015266.1 MGP_LPJ_G0013357.1 mouse_genomes_project 6 41231373 41231805 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015506.1 MGP_LPJ_G0013597.1 mouse_genomes_project 6 117351448 117351881 + processed_pseudogene processed_pseudogene MGP_LPJ_T0078558.1 MGP_LPJ_G0030911.1 mouse_genomes_project 6 90282612 90283775 - Podxl2 protein_coding processed_transcript MGP_LPJ_T0078559.1 MGP_LPJ_G0030911.1 mouse_genomes_project 6 90282821 90323098 - MGP_LPJ_P0078559 Podxl2 protein_coding protein_coding MGP_LPJ_T0078560.1 MGP_LPJ_G0030911.1 mouse_genomes_project 6 90283592 90285973 - Podxl2 protein_coding retained_intron MGP_LPJ_T0078561.1 MGP_LPJ_G0030911.1 mouse_genomes_project 6 90284230 90289424 - Podxl2 protein_coding processed_transcript MGP_LPJ_T0078562.1 MGP_LPJ_G0030911.1 mouse_genomes_project 6 90287014 90288890 - Podxl2 protein_coding retained_intron MGP_LPJ_T0078563.1 MGP_LPJ_G0030911.1 mouse_genomes_project 6 90289725 90322857 - MGP_LPJ_P0078563 Podxl2 protein_coding protein_coding MGP_LPJ_T0078564.1 MGP_LPJ_G0030911.1 mouse_genomes_project 6 90289725 90322915 - MGP_LPJ_P0078564 Podxl2 protein_coding protein_coding MGP_LPJ_T0078565.1 MGP_LPJ_G0030911.1 mouse_genomes_project 6 90289860 90308544 - Podxl2 protein_coding processed_transcript MGP_LPJ_T0078566.1 MGP_LPJ_G0030911.1 mouse_genomes_project 6 90307553 90323108 - Podxl2 protein_coding retained_intron MGP_LPJ_T0078567.1 MGP_LPJ_G0030911.1 mouse_genomes_project 6 90308088 90322496 - Podxl2 protein_coding retained_intron MGP_LPJ_T0100894.1 MGP_LPJ_G0039157.1 mouse_genomes_project 6 59267648 59267777 - Gm22622 snoRNA snoRNA MGP_LPJ_T0076807.1 MGP_LPJ_G0030492.1 mouse_genomes_project 6 36889093 36895262 + Fmc1 protein_coding processed_transcript MGP_LPJ_T0076808.1 MGP_LPJ_G0030492.1 mouse_genomes_project 6 36890636 36895263 + MGP_LPJ_P0076808 Fmc1 protein_coding protein_coding MGP_LPJ_T0018232.1 MGP_LPJ_G0015555.1 mouse_genomes_project 6 66938131 66986994 + E230016M11Rik processed_transcript bidirectional_promoter_lncRNA MGP_LPJ_T0018233.1 MGP_LPJ_G0015555.1 mouse_genomes_project 6 66938137 66970101 + E230016M11Rik processed_transcript bidirectional_promoter_lncRNA MGP_LPJ_T0018234.1 MGP_LPJ_G0015555.1 mouse_genomes_project 6 66938187 66986479 + E230016M11Rik processed_transcript retained_intron MGP_LPJ_T0018235.1 MGP_LPJ_G0015555.1 mouse_genomes_project 6 66983099 66986437 + E230016M11Rik processed_transcript retained_intron MGP_LPJ_T0015254.1 MGP_LPJ_G0013345.1 mouse_genomes_project 6 36710397 36711075 - processed_pseudogene processed_pseudogene MGP_LPJ_T0076371.1 MGP_LPJ_G0030416.1 mouse_genomes_project 6 26353478 26774566 + MGP_LPJ_P0076371 Snd1 protein_coding protein_coding MGP_LPJ_T0076372.1 MGP_LPJ_G0030416.1 mouse_genomes_project 6 26353478 26763487 + MGP_LPJ_P0076372 Snd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0076373.1 MGP_LPJ_G0030416.1 mouse_genomes_project 6 26353489 26818997 + MGP_LPJ_P0076373 Snd1 protein_coding protein_coding MGP_LPJ_T0076374.1 MGP_LPJ_G0030416.1 mouse_genomes_project 6 26353559 26355978 + Snd1 protein_coding retained_intron MGP_LPJ_T0076375.1 MGP_LPJ_G0030416.1 mouse_genomes_project 6 26353695 26680797 + MGP_LPJ_P0076375 Snd1 protein_coding protein_coding MGP_LPJ_T0076376.1 MGP_LPJ_G0030416.1 mouse_genomes_project 6 26437830 26605351 + Snd1 protein_coding processed_transcript MGP_LPJ_T0076378.1 MGP_LPJ_G0030416.1 mouse_genomes_project 6 26584590 26586769 + Snd1 protein_coding processed_transcript MGP_LPJ_T0076379.1 MGP_LPJ_G0030416.1 mouse_genomes_project 6 26585401 26605361 + Snd1 protein_coding processed_transcript MGP_LPJ_T0076380.1 MGP_LPJ_G0030416.1 mouse_genomes_project 6 26647393 26760751 + Snd1 protein_coding processed_transcript MGP_LPJ_T0076381.1 MGP_LPJ_G0030416.1 mouse_genomes_project 6 26660322 26765997 + Snd1 protein_coding processed_transcript MGP_LPJ_T0076383.1 MGP_LPJ_G0030416.1 mouse_genomes_project 6 26732762 26766072 + Snd1 protein_coding processed_transcript MGP_LPJ_T0076384.1 MGP_LPJ_G0030416.1 mouse_genomes_project 6 26765806 26772261 + Snd1 protein_coding retained_intron MGP_LPJ_T0080016.1 MGP_LPJ_G0031195.1 mouse_genomes_project 6 128857269 128857950 + Tnfrsf1a protein_coding processed_transcript MGP_LPJ_T0080017.1 MGP_LPJ_G0031195.1 mouse_genomes_project 6 128857365 128866142 + MGP_LPJ_P0080017 Tnfrsf1a protein_coding protein_coding MGP_LPJ_T0080018.1 MGP_LPJ_G0031195.1 mouse_genomes_project 6 128857637 128871355 + MGP_LPJ_P0080018 Tnfrsf1a protein_coding protein_coding MGP_LPJ_T0080019.1 MGP_LPJ_G0031195.1 mouse_genomes_project 6 128866196 128869975 + MGP_LPJ_P0080019 Tnfrsf1a protein_coding nonsense_mediated_decay MGP_LPJ_T0080020.1 MGP_LPJ_G0031195.1 mouse_genomes_project 6 128866596 128870648 + MGP_LPJ_P0080020 Tnfrsf1a protein_coding protein_coding MGP_LPJ_T0080021.1 MGP_LPJ_G0031195.1 mouse_genomes_project 6 128869263 128870744 + Tnfrsf1a protein_coding retained_intron MGP_LPJ_T0076978.1 MGP_LPJ_G0030545.1 mouse_genomes_project 6 40612404 40613364 + MGP_LPJ_P0076978 Tas2r139 protein_coding protein_coding MGP_LPJ_T0005029.1 MGP_LPJ_G0004305.1 mouse_genomes_project 6 87248398 87291021 + Gm19265 antisense antisense MGP_LPJ_T0000356.1 MGP_LPJ_G0000294.1 mouse_genomes_project 6 70243744 70244054 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0002165.1 MGP_LPJ_G0002074.1 mouse_genomes_project 6 127842197 127845587 - TEC TEC MGP_LPJ_T0015496.1 MGP_LPJ_G0013587.1 mouse_genomes_project 6 115503299 115503470 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015515.1 MGP_LPJ_G0013606.1 mouse_genomes_project 6 119936513 119936890 - processed_pseudogene processed_pseudogene MGP_LPJ_T0080301.1 MGP_LPJ_G0031288.1 mouse_genomes_project 6 136978527 136979457 - MGP_LPJ_P0080301 Tas2r122 protein_coding protein_coding MGP_LPJ_T0080139.1 MGP_LPJ_G0031223.1 mouse_genomes_project 6 132100180 132135255 + MGP_LPJ_P0080139 Gm44596 protein_coding protein_coding MGP_LPJ_T0001948.1 MGP_LPJ_G0001858.1 mouse_genomes_project 6 4729942 4731814 + TEC TEC MGP_LPJ_T0080258.1 MGP_LPJ_G0031261.1 mouse_genomes_project 6 133778782 133950155 - MGP_LPJ_P0080258 protein_coding protein_coding MGP_LPJ_T0076602.1 MGP_LPJ_G0030453.1 mouse_genomes_project 6 29504980 29628117 + MGP_LPJ_P0076602 Mkln1 protein_coding protein_coding MGP_LPJ_T0076603.1 MGP_LPJ_G0030453.1 mouse_genomes_project 6 29505073 29579227 + Mkln1 protein_coding retained_intron MGP_LPJ_T0076604.1 MGP_LPJ_G0030453.1 mouse_genomes_project 6 29505074 29544678 + Mkln1 protein_coding retained_intron MGP_LPJ_T0076605.1 MGP_LPJ_G0030453.1 mouse_genomes_project 6 29505081 29527433 + Mkln1 protein_coding retained_intron MGP_LPJ_T0076606.1 MGP_LPJ_G0030453.1 mouse_genomes_project 6 29505090 29512474 + Mkln1 protein_coding retained_intron MGP_LPJ_T0076607.1 MGP_LPJ_G0030453.1 mouse_genomes_project 6 29505090 29539587 + Mkln1 protein_coding retained_intron MGP_LPJ_T0076608.1 MGP_LPJ_G0030453.1 mouse_genomes_project 6 29505104 29541792 + Mkln1 protein_coding processed_transcript MGP_LPJ_T0076609.1 MGP_LPJ_G0030453.1 mouse_genomes_project 6 29539401 29598244 + Mkln1 protein_coding processed_transcript MGP_LPJ_T0076610.1 MGP_LPJ_G0030453.1 mouse_genomes_project 6 29539435 29582708 + Mkln1 protein_coding processed_transcript MGP_LPJ_T0076611.1 MGP_LPJ_G0030453.1 mouse_genomes_project 6 29576457 29601526 + Mkln1 protein_coding retained_intron MGP_LPJ_T0076612.1 MGP_LPJ_G0030453.1 mouse_genomes_project 6 29585695 29589302 + Mkln1 protein_coding retained_intron MGP_LPJ_T0076613.1 MGP_LPJ_G0030453.1 mouse_genomes_project 6 29598226 29617886 + MGP_LPJ_P0076613 Mkln1 protein_coding protein_coding MGP_LPJ_T0076614.1 MGP_LPJ_G0030453.1 mouse_genomes_project 6 29601453 29617765 + Mkln1 protein_coding retained_intron MGP_LPJ_T0008776.1 MGP_LPJ_G0007090.1 mouse_genomes_project 6 146789937 146799090 + Gm44244 lincRNA lincRNA MGP_LPJ_T0010836.1 MGP_LPJ_G0008954.1 mouse_genomes_project 6 132780582 132780638 - Gm27336 miRNA miRNA MGP_LPJ_T0008671.1 MGP_LPJ_G0007009.1 mouse_genomes_project 6 87824881 87825565 - Gm43936 lincRNA lincRNA MGP_LPJ_T0015633.1 MGP_LPJ_G0013724.1 mouse_genomes_project 6 154609834 154610279 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011658.1 MGP_LPJ_G0009776.1 mouse_genomes_project 6 51465872 51465968 + Gm28032 misc_RNA misc_RNA MGP_LPJ_T0076563.1 MGP_LPJ_G0030446.1 mouse_genomes_project 6 28642690 28664489 + MGP_LPJ_P0076563 Cpa5 protein_coding protein_coding MGP_LPJ_T0076564.1 MGP_LPJ_G0030446.1 mouse_genomes_project 6 28642731 28664264 + MGP_LPJ_P0076564 Cpa5 protein_coding protein_coding MGP_LPJ_T0076565.1 MGP_LPJ_G0030446.1 mouse_genomes_project 6 28643868 28664487 + MGP_LPJ_P0076565 Cpa5 protein_coding protein_coding MGP_LPJ_T0076566.1 MGP_LPJ_G0030446.1 mouse_genomes_project 6 28644235 28664180 + MGP_LPJ_P0076566 Cpa5 protein_coding nonsense_mediated_decay MGP_LPJ_T0008612.1 MGP_LPJ_G0006962.1 mouse_genomes_project 6 51213105 51229475 + Gm44077 lincRNA lincRNA MGP_LPJ_T0080058.1 MGP_LPJ_G0031205.1 mouse_genomes_project 6 130440606 130465157 + MGP_LPJ_P0080058 Akap3 protein_coding protein_coding MGP_LPJ_T0080059.1 MGP_LPJ_G0031205.1 mouse_genomes_project 6 130440652 130465154 + MGP_LPJ_P0080059 Akap3 protein_coding protein_coding MGP_LPJ_T0080060.1 MGP_LPJ_G0031205.1 mouse_genomes_project 6 130440668 130465157 + MGP_LPJ_P0080060 Akap3 protein_coding protein_coding MGP_LPJ_T0076919.1 MGP_LPJ_G0030516.1 mouse_genomes_project 6 38982528 38987213 - MGP_LPJ_P0076919 Prss37 protein_coding protein_coding MGP_LPJ_T0076920.1 MGP_LPJ_G0030516.1 mouse_genomes_project 6 38986873 38987188 - Prss37 protein_coding processed_transcript MGP_LPJ_T0000208.1 MGP_LPJ_G0000157.1 mouse_genomes_project 6 69917959 69918459 - MGP_LPJ_P0000208 Igkv12-46 IG_V_gene IG_V_gene MGP_LPJ_T0002135.1 MGP_LPJ_G0002045.1 mouse_genomes_project 6 103481408 103482292 - TEC TEC MGP_LPJ_T0078956.1 MGP_LPJ_G0030996.1 mouse_genomes_project 6 109834425 109876359 + MGP_LPJ_P0078956 Lrrn1 protein_coding protein_coding MGP_LPJ_T0076171.1 MGP_LPJ_G0030373.1 mouse_genomes_project 6 14608839 14617254 + MGP_LPJ_P0076171 Cav2 protein_coding protein_coding MGP_LPJ_T0076172.1 MGP_LPJ_G0030373.1 mouse_genomes_project 6 14608981 14610339 + MGP_LPJ_P0076172 Cav2 protein_coding protein_coding MGP_LPJ_T0076173.1 MGP_LPJ_G0030373.1 mouse_genomes_project 6 14609013 14615093 + MGP_LPJ_P0076173 Cav2 protein_coding protein_coding MGP_LPJ_T0077608.1 MGP_LPJ_G0030721.1 mouse_genomes_project 6 58463824 58465668 - MGP_LPJ_P0077608 Nap1l5 protein_coding protein_coding MGP_LPJ_T0077609.1 MGP_LPJ_G0030721.1 mouse_genomes_project 6 58464395 58465265 - MGP_LPJ_P0077609 Nap1l5 protein_coding protein_coding MGP_LPJ_T0002119.1 MGP_LPJ_G0002029.1 mouse_genomes_project 6 94900409 94902888 + TEC TEC MGP_LPJ_T0008714.1 MGP_LPJ_G0007041.1 mouse_genomes_project 6 107959310 107963862 - Gm15631 lincRNA lincRNA MGP_LPJ_T0018241.1 MGP_LPJ_G0015558.1 mouse_genomes_project 6 84456214 84462789 + B230319C09Rik processed_transcript antisense MGP_LPJ_T0018242.1 MGP_LPJ_G0015558.1 mouse_genomes_project 6 84456269 84459827 + B230319C09Rik processed_transcript processed_transcript MGP_LPJ_T0018243.1 MGP_LPJ_G0015558.1 mouse_genomes_project 6 84456271 84457100 + B230319C09Rik processed_transcript processed_transcript MGP_LPJ_T0076858.1 MGP_LPJ_G0030502.1 mouse_genomes_project 6 37805228 37832135 - MGP_LPJ_P0076858 Mkrn1 protein_coding protein_coding MGP_LPJ_T0076859.1 MGP_LPJ_G0030502.1 mouse_genomes_project 6 37806566 37812129 - MGP_LPJ_P0076859 Mkrn1 protein_coding protein_coding MGP_LPJ_T0076860.1 MGP_LPJ_G0030502.1 mouse_genomes_project 6 37808177 37831919 - MGP_LPJ_P0076860 Mkrn1 protein_coding protein_coding MGP_LPJ_T0076861.1 MGP_LPJ_G0030502.1 mouse_genomes_project 6 37808183 37832210 - MGP_LPJ_P0076861 Mkrn1 protein_coding protein_coding MGP_LPJ_T0076862.1 MGP_LPJ_G0030502.1 mouse_genomes_project 6 37808698 37812480 - Mkrn1 protein_coding retained_intron MGP_LPJ_T0076863.1 MGP_LPJ_G0030502.1 mouse_genomes_project 6 37812209 37831609 - MGP_LPJ_P0076863 Mkrn1 protein_coding protein_coding MGP_LPJ_T0076864.1 MGP_LPJ_G0030502.1 mouse_genomes_project 6 37812937 37832150 - MGP_LPJ_P0076864 Mkrn1 protein_coding protein_coding MGP_LPJ_T0102239.1 MGP_LPJ_G0040276.1 mouse_genomes_project 6 60744529 60744794 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008768.1 MGP_LPJ_G0007084.1 mouse_genomes_project 6 139741401 139749665 - Gm44275 lincRNA lincRNA MGP_LPJ_T0008573.1 MGP_LPJ_G0006938.1 mouse_genomes_project 6 33498550 33509369 + 1810058I24Rik lincRNA lincRNA MGP_LPJ_T0008574.1 MGP_LPJ_G0006938.1 mouse_genomes_project 6 33498612 33507534 + 1810058I24Rik lincRNA lincRNA MGP_LPJ_T0008575.1 MGP_LPJ_G0006938.1 mouse_genomes_project 6 33498628 33507919 + 1810058I24Rik lincRNA lincRNA MGP_LPJ_T0015481.1 MGP_LPJ_G0013572.1 mouse_genomes_project 6 109658705 109658931 - processed_pseudogene processed_pseudogene MGP_LPJ_T0078319.1 MGP_LPJ_G0030867.1 mouse_genomes_project 6 87502595 87583704 + MGP_LPJ_P0078319 Tgfa protein_coding protein_coding MGP_LPJ_T0078320.1 MGP_LPJ_G0030867.1 mouse_genomes_project 6 87502623 87517486 + Tgfa protein_coding processed_transcript MGP_LPJ_T0078321.1 MGP_LPJ_G0030867.1 mouse_genomes_project 6 87502762 87580010 + MGP_LPJ_P0078321 Tgfa protein_coding protein_coding MGP_LPJ_T0078322.1 MGP_LPJ_G0030867.1 mouse_genomes_project 6 87519168 87580200 + Tgfa protein_coding processed_transcript MGP_LPJ_T0015450.1 MGP_LPJ_G0013541.1 mouse_genomes_project 6 96052873 96053637 - processed_pseudogene processed_pseudogene MGP_LPJ_T0080673.1 MGP_LPJ_G0031378.1 mouse_genomes_project 6 148145656 148197347 + MGP_LPJ_P0080673 Etnk1 protein_coding protein_coding MGP_LPJ_T0080674.1 MGP_LPJ_G0031378.1 mouse_genomes_project 6 148145665 148187748 + MGP_LPJ_P0080674 Etnk1 protein_coding protein_coding MGP_LPJ_T0080675.1 MGP_LPJ_G0031378.1 mouse_genomes_project 6 148145689 148170444 + Etnk1 protein_coding retained_intron MGP_LPJ_T0080676.1 MGP_LPJ_G0031378.1 mouse_genomes_project 6 148145689 148212181 + MGP_LPJ_P0080676 Etnk1 protein_coding protein_coding MGP_LPJ_T0002037.1 MGP_LPJ_G0001947.1 mouse_genomes_project 6 72541642 72544255 + TEC TEC MGP_LPJ_T0080293.1 MGP_LPJ_G0031281.1 mouse_genomes_project 6 136701136 136712500 - MGP_LPJ_P0080293 Prb1 protein_coding protein_coding MGP_LPJ_T0015267.1 MGP_LPJ_G0013358.1 mouse_genomes_project 6 41239970 41240136 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002725.1 MGP_LPJ_G0002601.1 mouse_genomes_project 6 39757773 39758261 + MGP_LPJ_P0002725 Trbv29 TR_V_gene TR_V_gene MGP_LPJ_T0005070.1 MGP_LPJ_G0004329.1 mouse_genomes_project 6 103173659 103317804 + Gm43948 antisense antisense MGP_LPJ_T0002721.1 MGP_LPJ_G0002599.1 mouse_genomes_project 6 39705281 39705735 + MGP_LPJ_P0002721 Trbv23 TR_V_gene TR_V_gene MGP_LPJ_T0002722.1 MGP_LPJ_G0002599.1 mouse_genomes_project 6 39705281 39705735 + MGP_LPJ_P0002722 Trbv23 TR_V_gene TR_V_gene MGP_LPJ_T0078943.1 MGP_LPJ_G0030994.1 mouse_genomes_project 6 109093686 109102250 + MGP_LPJ_P0078943 Trnt1 protein_coding protein_coding MGP_LPJ_T0078944.1 MGP_LPJ_G0030994.1 mouse_genomes_project 6 109093707 109106432 + MGP_LPJ_P0078944 Trnt1 protein_coding protein_coding MGP_LPJ_T0078945.1 MGP_LPJ_G0030994.1 mouse_genomes_project 6 109093732 109107035 + MGP_LPJ_P0078945 Trnt1 protein_coding protein_coding MGP_LPJ_T0078946.1 MGP_LPJ_G0030994.1 mouse_genomes_project 6 109093732 109106215 + MGP_LPJ_P0078946 Trnt1 protein_coding protein_coding MGP_LPJ_T0078947.1 MGP_LPJ_G0030994.1 mouse_genomes_project 6 109093736 109094731 + Trnt1 protein_coding retained_intron MGP_LPJ_T0078948.1 MGP_LPJ_G0030994.1 mouse_genomes_project 6 109093779 109097622 + Trnt1 protein_coding processed_transcript MGP_LPJ_T0078949.1 MGP_LPJ_G0030994.1 mouse_genomes_project 6 109093852 109097918 + MGP_LPJ_P0078949 Trnt1 protein_coding protein_coding MGP_LPJ_T0078950.1 MGP_LPJ_G0030994.1 mouse_genomes_project 6 109094073 109099032 + MGP_LPJ_P0078950 Trnt1 protein_coding protein_coding MGP_LPJ_T0005028.1 MGP_LPJ_G0004304.1 mouse_genomes_project 6 86015017 86018891 + Gm44012 antisense antisense MGP_LPJ_T0080314.1 MGP_LPJ_G0031301.1 mouse_genomes_project 6 137230295 137231297 - MGP_LPJ_P0080314 Tas2r123 protein_coding protein_coding MGP_LPJ_T0079177.1 MGP_LPJ_G0031036.1 mouse_genomes_project 6 116297562 116310244 - MGP_LPJ_P0079177 Sec13 protein_coding protein_coding MGP_LPJ_T0079178.1 MGP_LPJ_G0031036.1 mouse_genomes_project 6 116299930 116304571 - Sec13 protein_coding retained_intron MGP_LPJ_T0079179.1 MGP_LPJ_G0031036.1 mouse_genomes_project 6 116300096 116304571 - Sec13 protein_coding retained_intron MGP_LPJ_T0079180.1 MGP_LPJ_G0031036.1 mouse_genomes_project 6 116308629 116310228 - Sec13 protein_coding retained_intron MGP_LPJ_T0005098.1 MGP_LPJ_G0004349.1 mouse_genomes_project 6 123871427 123872393 + Gm43916 antisense antisense MGP_LPJ_T0002079.1 MGP_LPJ_G0001989.1 mouse_genomes_project 6 88213211 88216091 + TEC TEC MGP_LPJ_T0008751.1 MGP_LPJ_G0007076.1 mouse_genomes_project 6 132692341 132695316 - Gm44067 lincRNA lincRNA MGP_LPJ_T0015596.1 MGP_LPJ_G0013687.1 mouse_genomes_project 6 137245749 137246108 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004949.1 MGP_LPJ_G0004248.1 mouse_genomes_project 6 30660263 30664767 + Plxna4os1 antisense antisense MGP_LPJ_T0099663.1 MGP_LPJ_G0037926.1 mouse_genomes_project 6 98303110 98303207 - Gm22971 snRNA snRNA MGP_LPJ_T0015540.1 MGP_LPJ_G0013631.1 mouse_genomes_project 6 126437028 126437179 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015225.1 MGP_LPJ_G0013316.1 mouse_genomes_project 6 19854552 19855065 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000198.1 MGP_LPJ_G0000147.1 mouse_genomes_project 6 69605061 69605559 - MGP_LPJ_P0000198 Igkv4-51 IG_V_gene IG_V_gene MGP_LPJ_T0002024.1 MGP_LPJ_G0001934.1 mouse_genomes_project 6 57304470 57307197 + TEC TEC MGP_LPJ_T0078396.1 MGP_LPJ_G0030880.1 mouse_genomes_project 6 88199899 88358085 + MGP_LPJ_P0078396 Aak1 protein_coding protein_coding MGP_LPJ_T0078397.1 MGP_LPJ_G0030880.1 mouse_genomes_project 6 88199914 88290586 + MGP_LPJ_P0078397 Aak1 protein_coding protein_coding MGP_LPJ_T0078398.1 MGP_LPJ_G0030880.1 mouse_genomes_project 6 88200010 88305884 + Aak1 protein_coding retained_intron MGP_LPJ_T0078399.1 MGP_LPJ_G0030880.1 mouse_genomes_project 6 88200435 88346711 + MGP_LPJ_P0078399 Aak1 protein_coding protein_coding MGP_LPJ_T0078400.1 MGP_LPJ_G0030880.1 mouse_genomes_project 6 88201567 88290581 + Aak1 protein_coding processed_transcript MGP_LPJ_T0078401.1 MGP_LPJ_G0030880.1 mouse_genomes_project 6 88314000 88350743 + MGP_LPJ_P0078401 Aak1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078402.1 MGP_LPJ_G0030880.1 mouse_genomes_project 6 88322234 88351066 + Aak1 protein_coding processed_transcript MGP_LPJ_T0078403.1 MGP_LPJ_G0030880.1 mouse_genomes_project 6 88340111 88342876 + Aak1 protein_coding retained_intron MGP_LPJ_T0078404.1 MGP_LPJ_G0030880.1 mouse_genomes_project 6 88349857 88351522 + Aak1 protein_coding processed_transcript MGP_LPJ_T0000047.1 MGP_LPJ_G0000039.1 mouse_genomes_project 6 71076368 71076406 + MGP_LPJ_P0000047 Igkj1 IG_J_gene IG_J_gene MGP_LPJ_T0015382.1 MGP_LPJ_G0013473.1 mouse_genomes_project 6 70493910 70495255 + processed_pseudogene processed_pseudogene MGP_LPJ_T0076751.1 MGP_LPJ_G0030480.1 mouse_genomes_project 6 35137916 35597720 - MGP_LPJ_P0076751 Dgki protein_coding protein_coding MGP_LPJ_T0076752.1 MGP_LPJ_G0030480.1 mouse_genomes_project 6 35138875 35597930 - MGP_LPJ_P0076752 Dgki protein_coding nonsense_mediated_decay MGP_LPJ_T0076753.1 MGP_LPJ_G0030480.1 mouse_genomes_project 6 35138875 35597930 - MGP_LPJ_P0076753 Dgki protein_coding nonsense_mediated_decay MGP_LPJ_T0076754.1 MGP_LPJ_G0030480.1 mouse_genomes_project 6 35138875 35597930 - MGP_LPJ_P0076754 Dgki protein_coding protein_coding MGP_LPJ_T0076755.1 MGP_LPJ_G0030480.1 mouse_genomes_project 6 35139050 35597383 - MGP_LPJ_P0076755 Dgki protein_coding protein_coding MGP_LPJ_T0076756.1 MGP_LPJ_G0030480.1 mouse_genomes_project 6 35209570 35332477 - Dgki protein_coding processed_transcript MGP_LPJ_T0076757.1 MGP_LPJ_G0030480.1 mouse_genomes_project 6 35336056 35365962 - Dgki protein_coding processed_transcript MGP_LPJ_T0076758.1 MGP_LPJ_G0030480.1 mouse_genomes_project 6 35528923 35597490 - Dgki protein_coding processed_transcript MGP_LPJ_T0004946.1 MGP_LPJ_G0004246.1 mouse_genomes_project 6 30442177 30457705 + Plxna4os3 antisense antisense MGP_LPJ_T0004947.1 MGP_LPJ_G0004246.1 mouse_genomes_project 6 30442261 30457697 + Plxna4os3 antisense antisense MGP_LPJ_T0008653.1 MGP_LPJ_G0006997.1 mouse_genomes_project 6 82583364 82628372 - Gm43902 lincRNA lincRNA MGP_LPJ_T0002019.1 MGP_LPJ_G0001929.1 mouse_genomes_project 6 54230148 54233456 + TEC TEC MGP_LPJ_T0000340.1 MGP_LPJ_G0000278.1 mouse_genomes_project 6 69050065 69050695 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0077702.1 MGP_LPJ_G0030743.1 mouse_genomes_project 6 67182459 67223728 + Serbp1 protein_coding processed_transcript MGP_LPJ_T0077703.1 MGP_LPJ_G0030743.1 mouse_genomes_project 6 67219087 67251872 + MGP_LPJ_P0077703 Serbp1 protein_coding protein_coding MGP_LPJ_T0077704.1 MGP_LPJ_G0030743.1 mouse_genomes_project 6 67219446 67236958 + MGP_LPJ_P0077704 Serbp1 protein_coding protein_coding MGP_LPJ_T0077705.1 MGP_LPJ_G0030743.1 mouse_genomes_project 6 67219451 67221818 + Serbp1 protein_coding retained_intron MGP_LPJ_T0077706.1 MGP_LPJ_G0030743.1 mouse_genomes_project 6 67219468 67236718 + MGP_LPJ_P0077706 Serbp1 protein_coding protein_coding MGP_LPJ_T0077707.1 MGP_LPJ_G0030743.1 mouse_genomes_project 6 67219473 67236710 + MGP_LPJ_P0077707 Serbp1 protein_coding protein_coding MGP_LPJ_T0077708.1 MGP_LPJ_G0030743.1 mouse_genomes_project 6 67219474 67226466 + Serbp1 protein_coding retained_intron MGP_LPJ_T0077709.1 MGP_LPJ_G0030743.1 mouse_genomes_project 6 67219474 67236963 + MGP_LPJ_P0077709 Serbp1 protein_coding protein_coding MGP_LPJ_T0077710.1 MGP_LPJ_G0030743.1 mouse_genomes_project 6 67219474 67236710 + MGP_LPJ_P0077710 Serbp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0077711.1 MGP_LPJ_G0030743.1 mouse_genomes_project 6 67219479 67227061 + Serbp1 protein_coding retained_intron MGP_LPJ_T0077712.1 MGP_LPJ_G0030743.1 mouse_genomes_project 6 67219501 67230237 + MGP_LPJ_P0077712 Serbp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0077713.1 MGP_LPJ_G0030743.1 mouse_genomes_project 6 67219534 67236677 + MGP_LPJ_P0077713 Serbp1 protein_coding protein_coding MGP_LPJ_T0077714.1 MGP_LPJ_G0030743.1 mouse_genomes_project 6 67219542 67224696 + Serbp1 protein_coding retained_intron MGP_LPJ_T0077715.1 MGP_LPJ_G0030743.1 mouse_genomes_project 6 67219720 67225311 + MGP_LPJ_P0077715 Serbp1 protein_coding protein_coding MGP_LPJ_T0077716.1 MGP_LPJ_G0030743.1 mouse_genomes_project 6 67219793 67234476 + MGP_LPJ_P0077716 Serbp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0077717.1 MGP_LPJ_G0030743.1 mouse_genomes_project 6 67224334 67234493 + Serbp1 protein_coding retained_intron MGP_LPJ_T0079470.1 MGP_LPJ_G0031089.1 mouse_genomes_project 6 122033911 122155855 + MGP_LPJ_P0079470 Cacna2d4 protein_coding protein_coding MGP_LPJ_T0079471.1 MGP_LPJ_G0031089.1 mouse_genomes_project 6 122033912 122078140 + Cacna2d4 protein_coding retained_intron MGP_LPJ_T0079472.1 MGP_LPJ_G0031089.1 mouse_genomes_project 6 122033980 122153907 + MGP_LPJ_P0079472 Cacna2d4 protein_coding protein_coding MGP_LPJ_T0079473.1 MGP_LPJ_G0031089.1 mouse_genomes_project 6 122049204 122103758 + Cacna2d4 protein_coding processed_transcript MGP_LPJ_T0079474.1 MGP_LPJ_G0031089.1 mouse_genomes_project 6 122050341 122071988 + Cacna2d4 protein_coding processed_transcript MGP_LPJ_T0079475.1 MGP_LPJ_G0031089.1 mouse_genomes_project 6 122067628 122071286 + Cacna2d4 protein_coding processed_transcript MGP_LPJ_T0079476.1 MGP_LPJ_G0031089.1 mouse_genomes_project 6 122067829 122071329 + Cacna2d4 protein_coding retained_intron MGP_LPJ_T0079481.1 MGP_LPJ_G0031089.1 mouse_genomes_project 6 122133113 122147520 + Cacna2d4 protein_coding processed_transcript MGP_LPJ_T0079482.1 MGP_LPJ_G0031089.1 mouse_genomes_project 6 122133146 122140441 + Cacna2d4 protein_coding retained_intron MGP_LPJ_T0079483.1 MGP_LPJ_G0031089.1 mouse_genomes_project 6 122133184 122153584 + MGP_LPJ_P0079483 Cacna2d4 protein_coding unknown_likely_coding MGP_LPJ_T0079484.1 MGP_LPJ_G0031089.1 mouse_genomes_project 6 122134866 122150711 + Cacna2d4 protein_coding processed_transcript MGP_LPJ_T0000344.1 MGP_LPJ_G0000282.1 mouse_genomes_project 6 69424618 69425091 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0001955.1 MGP_LPJ_G0001865.1 mouse_genomes_project 6 15287330 15295985 + TEC TEC MGP_LPJ_T0010818.1 MGP_LPJ_G0008936.1 mouse_genomes_project 6 116276267 116276325 + Mir7042 miRNA miRNA MGP_LPJ_T0102230.1 MGP_LPJ_G0040267.1 mouse_genomes_project 6 57525517 57526430 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0078036.1 MGP_LPJ_G0030813.1 mouse_genomes_project 6 84076628 84077753 + MGP_LPJ_P0078036 Pcgf1 protein_coding protein_coding MGP_LPJ_T0078037.1 MGP_LPJ_G0030813.1 mouse_genomes_project 6 84077105 84079498 + MGP_LPJ_P0078037 Pcgf1 protein_coding protein_coding MGP_LPJ_T0078038.1 MGP_LPJ_G0030813.1 mouse_genomes_project 6 84077149 84079490 + MGP_LPJ_P0078038 Pcgf1 protein_coding protein_coding MGP_LPJ_T0078039.1 MGP_LPJ_G0030813.1 mouse_genomes_project 6 84077389 84079497 + MGP_LPJ_P0078039 Pcgf1 protein_coding protein_coding MGP_LPJ_T0078040.1 MGP_LPJ_G0030813.1 mouse_genomes_project 6 84077389 84079400 + MGP_LPJ_P0078040 Pcgf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078041.1 MGP_LPJ_G0030813.1 mouse_genomes_project 6 84077450 84079400 + MGP_LPJ_P0078041 Pcgf1 protein_coding protein_coding MGP_LPJ_T0078042.1 MGP_LPJ_G0030813.1 mouse_genomes_project 6 84077477 84078353 + Pcgf1 protein_coding retained_intron MGP_LPJ_T0078043.1 MGP_LPJ_G0030813.1 mouse_genomes_project 6 84078662 84079497 + Pcgf1 protein_coding retained_intron MGP_LPJ_T0079872.1 MGP_LPJ_G0031171.1 mouse_genomes_project 6 128318649 128335279 - MGP_LPJ_P0079872 P3h3 protein_coding protein_coding MGP_LPJ_T0079873.1 MGP_LPJ_G0031171.1 mouse_genomes_project 6 128318766 128335256 - MGP_LPJ_P0079873 P3h3 protein_coding nonsense_mediated_decay MGP_LPJ_T0079874.1 MGP_LPJ_G0031171.1 mouse_genomes_project 6 128319054 128320172 - P3h3 protein_coding retained_intron MGP_LPJ_T0079875.1 MGP_LPJ_G0031171.1 mouse_genomes_project 6 128322885 128328524 - P3h3 protein_coding retained_intron MGP_LPJ_T0079876.1 MGP_LPJ_G0031171.1 mouse_genomes_project 6 128323533 128332451 - P3h3 protein_coding retained_intron MGP_LPJ_T0079877.1 MGP_LPJ_G0031171.1 mouse_genomes_project 6 128323575 128332354 - P3h3 protein_coding retained_intron MGP_LPJ_T0079878.1 MGP_LPJ_G0031171.1 mouse_genomes_project 6 128331922 128332697 - P3h3 protein_coding retained_intron MGP_LPJ_T0076457.1 MGP_LPJ_G0030432.1 mouse_genomes_project 6 27460430 27471206 + MGP_LPJ_P0076457 Irf5 protein_coding protein_coding MGP_LPJ_T0076458.1 MGP_LPJ_G0030432.1 mouse_genomes_project 6 27460513 27475774 + MGP_LPJ_P0076458 Irf5 protein_coding protein_coding MGP_LPJ_T0076459.1 MGP_LPJ_G0030432.1 mouse_genomes_project 6 27462075 27467884 + MGP_LPJ_P0076459 Irf5 protein_coding protein_coding MGP_LPJ_T0076460.1 MGP_LPJ_G0030432.1 mouse_genomes_project 6 27463167 27471206 + MGP_LPJ_P0076460 Irf5 protein_coding protein_coding MGP_LPJ_T0076461.1 MGP_LPJ_G0030432.1 mouse_genomes_project 6 27465134 27469233 + MGP_LPJ_P0076461 Irf5 protein_coding protein_coding MGP_LPJ_T0076465.1 MGP_LPJ_G0030432.1 mouse_genomes_project 6 27475049 27475761 + Irf5 protein_coding processed_transcript MGP_LPJ_T0015625.1 MGP_LPJ_G0013716.1 mouse_genomes_project 6 152316782 152319735 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011667.1 MGP_LPJ_G0009785.1 mouse_genomes_project 6 51488098 51488269 + Gm27866 misc_RNA misc_RNA MGP_LPJ_T0002043.1 MGP_LPJ_G0001953.1 mouse_genomes_project 6 73230665 73233443 - TEC TEC MGP_LPJ_T0078120.1 MGP_LPJ_G0030829.1 mouse_genomes_project 6 84380642 84469517 - MGP_LPJ_P0078120 Tet3 protein_coding protein_coding MGP_LPJ_T0078121.1 MGP_LPJ_G0030829.1 mouse_genomes_project 6 84413085 84456138 - Tet3 protein_coding processed_transcript MGP_LPJ_T0078122.1 MGP_LPJ_G0030829.1 mouse_genomes_project 6 84418951 84474348 - MGP_LPJ_P0078122 Tet3 protein_coding protein_coding MGP_LPJ_T0078123.1 MGP_LPJ_G0030829.1 mouse_genomes_project 6 84451252 84456092 - Tet3 protein_coding retained_intron MGP_LPJ_T0015490.1 MGP_LPJ_G0013581.1 mouse_genomes_project 6 111915694 111915947 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002131.1 MGP_LPJ_G0002041.1 mouse_genomes_project 6 103264145 103267005 + TEC TEC MGP_LPJ_T0008651.1 MGP_LPJ_G0006995.1 mouse_genomes_project 6 79646425 79646745 - Gm29005 lincRNA lincRNA MGP_LPJ_T0004950.1 MGP_LPJ_G0004249.1 mouse_genomes_project 6 31186973 31191728 + Gm14540 antisense antisense MGP_LPJ_T0002163.1 MGP_LPJ_G0002072.1 mouse_genomes_project 6 124123238 124124747 - TEC TEC MGP_LPJ_T0015226.1 MGP_LPJ_G0013317.1 mouse_genomes_project 6 20263927 20264703 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015304.1 MGP_LPJ_G0013395.1 mouse_genomes_project 6 51344600 51344869 - processed_pseudogene processed_pseudogene MGP_LPJ_T0077212.1 MGP_LPJ_G0030613.1 mouse_genomes_project 6 47675771 47679421 + MGP_LPJ_P0077212 protein_coding protein_coding MGP_LPJ_T0077213.1 MGP_LPJ_G0030613.1 mouse_genomes_project 6 47675785 47676733 + protein_coding retained_intron MGP_LPJ_T0077214.1 MGP_LPJ_G0030613.1 mouse_genomes_project 6 47675805 47678494 + protein_coding retained_intron MGP_LPJ_T0077215.1 MGP_LPJ_G0030613.1 mouse_genomes_project 6 47678879 47681783 + protein_coding retained_intron MGP_LPJ_T0079658.1 MGP_LPJ_G0031121.1 mouse_genomes_project 6 125537897 125548210 + MGP_LPJ_P0079658 M6pr protein_coding protein_coding MGP_LPJ_T0079659.1 MGP_LPJ_G0031121.1 mouse_genomes_project 6 125538176 125546185 + M6pr protein_coding retained_intron MGP_LPJ_T0077571.1 MGP_LPJ_G0030708.1 mouse_genomes_project 6 57302348 57303383 - MGP_LPJ_P0077571 Vmn1r21 protein_coding protein_coding MGP_LPJ_T0077572.1 MGP_LPJ_G0030708.1 mouse_genomes_project 6 57303019 57309237 - MGP_LPJ_P0077572 Vmn1r21 protein_coding protein_coding MGP_LPJ_T0077573.1 MGP_LPJ_G0030708.1 mouse_genomes_project 6 57303026 57309239 - MGP_LPJ_P0077573 Vmn1r21 protein_coding protein_coding MGP_LPJ_T0075952.1 MGP_LPJ_G0030331.1 mouse_genomes_project 6 811913 821818 - MGP_LPJ_P0075952 Bet1 protein_coding protein_coding MGP_LPJ_T0075953.1 MGP_LPJ_G0030331.1 mouse_genomes_project 6 812733 821765 - Bet1 protein_coding processed_transcript MGP_LPJ_T0075954.1 MGP_LPJ_G0030331.1 mouse_genomes_project 6 812887 815116 - Bet1 protein_coding retained_intron MGP_LPJ_T0075955.1 MGP_LPJ_G0030331.1 mouse_genomes_project 6 815342 821818 - Bet1 protein_coding retained_intron MGP_LPJ_T0075956.1 MGP_LPJ_G0030331.1 mouse_genomes_project 6 816345 821776 - Bet1 protein_coding processed_transcript MGP_LPJ_T0075957.1 MGP_LPJ_G0030331.1 mouse_genomes_project 6 816368 821776 - Bet1 protein_coding processed_transcript MGP_LPJ_T0008601.1 MGP_LPJ_G0006954.1 mouse_genomes_project 6 49883764 49923617 + C530044C16Rik lincRNA lincRNA MGP_LPJ_T0008602.1 MGP_LPJ_G0006954.1 mouse_genomes_project 6 49883973 49923756 + C530044C16Rik lincRNA lincRNA MGP_LPJ_T0008726.1 MGP_LPJ_G0007053.1 mouse_genomes_project 6 120310770 120323359 + Gm9946 lincRNA lincRNA MGP_LPJ_T0008727.1 MGP_LPJ_G0007053.1 mouse_genomes_project 6 120310770 120319255 + Gm9946 lincRNA lincRNA MGP_LPJ_T0008728.1 MGP_LPJ_G0007053.1 mouse_genomes_project 6 120318733 120319117 + Gm9946 lincRNA lincRNA MGP_LPJ_T0076643.1 MGP_LPJ_G0030459.1 mouse_genomes_project 6 32212782 32321091 + MGP_LPJ_P0076643 Lrguk protein_coding protein_coding MGP_LPJ_T0076644.1 MGP_LPJ_G0030459.1 mouse_genomes_project 6 32212784 32231981 + MGP_LPJ_P0076644 Lrguk protein_coding protein_coding MGP_LPJ_T0076645.1 MGP_LPJ_G0030459.1 mouse_genomes_project 6 32222679 32231996 + MGP_LPJ_P0076645 Lrguk protein_coding protein_coding MGP_LPJ_T0018263.1 MGP_LPJ_G0015566.1 mouse_genomes_project 6 129005378 129020510 + Gm26728 processed_transcript antisense MGP_LPJ_T0018264.1 MGP_LPJ_G0015566.1 mouse_genomes_project 6 129005382 129006917 + Gm26728 processed_transcript retained_intron MGP_LPJ_T0018265.1 MGP_LPJ_G0015566.1 mouse_genomes_project 6 129005384 129010628 + Gm26728 processed_transcript antisense MGP_LPJ_T0079235.1 MGP_LPJ_G0031044.1 mouse_genomes_project 6 117761483 117903781 + Syn2 protein_coding retained_intron MGP_LPJ_T0079236.1 MGP_LPJ_G0031044.1 mouse_genomes_project 6 117761483 117905249 + MGP_LPJ_P0079236 Syn2 protein_coding protein_coding MGP_LPJ_T0079237.1 MGP_LPJ_G0031044.1 mouse_genomes_project 6 117761498 117910696 + MGP_LPJ_P0079237 Syn2 protein_coding protein_coding MGP_LPJ_T0079238.1 MGP_LPJ_G0031044.1 mouse_genomes_project 6 117761531 117905249 + MGP_LPJ_P0079238 Syn2 protein_coding protein_coding MGP_LPJ_T0079239.1 MGP_LPJ_G0031044.1 mouse_genomes_project 6 117840966 117870693 + Syn2 protein_coding processed_transcript MGP_LPJ_T0079241.1 MGP_LPJ_G0031044.1 mouse_genomes_project 6 117865568 117905249 + Syn2 protein_coding processed_transcript MGP_LPJ_T0079244.1 MGP_LPJ_G0031044.1 mouse_genomes_project 6 117881680 117907399 + Syn2 protein_coding retained_intron MGP_LPJ_T0015381.1 MGP_LPJ_G0013472.1 mouse_genomes_project 6 70309783 70310772 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098284.1 MGP_LPJ_G0036565.1 mouse_genomes_project 6 21327145 21327278 - Gm24217 rRNA rRNA MGP_LPJ_T0079493.1 MGP_LPJ_G0031094.1 mouse_genomes_project 6 122394295 122695994 - MGP_LPJ_P0079493 Erc1 protein_coding protein_coding MGP_LPJ_T0079494.1 MGP_LPJ_G0031094.1 mouse_genomes_project 6 122394303 122670889 - MGP_LPJ_P0079494 Erc1 protein_coding protein_coding MGP_LPJ_T0079495.1 MGP_LPJ_G0031094.1 mouse_genomes_project 6 122396129 122695943 - MGP_LPJ_P0079495 Erc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0079496.1 MGP_LPJ_G0031094.1 mouse_genomes_project 6 122397207 122695903 - MGP_LPJ_P0079496 Erc1 protein_coding protein_coding MGP_LPJ_T0079497.1 MGP_LPJ_G0031094.1 mouse_genomes_project 6 122398056 122695959 - MGP_LPJ_P0079497 Erc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0079498.1 MGP_LPJ_G0031094.1 mouse_genomes_project 6 122398491 122576483 - MGP_LPJ_P0079498 Erc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0079499.1 MGP_LPJ_G0031094.1 mouse_genomes_project 6 122398726 122695978 - MGP_LPJ_P0079499 Erc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0079500.1 MGP_LPJ_G0031094.1 mouse_genomes_project 6 122398796 122696011 - MGP_LPJ_P0079500 Erc1 protein_coding protein_coding MGP_LPJ_T0079501.1 MGP_LPJ_G0031094.1 mouse_genomes_project 6 122399011 122695933 - MGP_LPJ_P0079501 Erc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0079502.1 MGP_LPJ_G0031094.1 mouse_genomes_project 6 122442880 122447714 - Erc1 protein_coding retained_intron MGP_LPJ_T0079503.1 MGP_LPJ_G0031094.1 mouse_genomes_project 6 122444493 122576481 - MGP_LPJ_P0079503 Erc1 protein_coding unknown_likely_coding MGP_LPJ_T0079504.1 MGP_LPJ_G0031094.1 mouse_genomes_project 6 122554477 122642380 - Erc1 protein_coding processed_transcript MGP_LPJ_T0079505.1 MGP_LPJ_G0031094.1 mouse_genomes_project 6 122581369 122695763 - MGP_LPJ_P0079505 Erc1 protein_coding unknown_likely_coding MGP_LPJ_T0079506.1 MGP_LPJ_G0031094.1 mouse_genomes_project 6 122605993 122695946 - MGP_LPJ_P0079506 Erc1 protein_coding protein_coding MGP_LPJ_T0079507.1 MGP_LPJ_G0031094.1 mouse_genomes_project 6 122669647 122672121 - Erc1 protein_coding retained_intron MGP_LPJ_T0005023.1 MGP_LPJ_G0004301.1 mouse_genomes_project 6 84797874 84798961 - 1700124L16Rik antisense antisense MGP_LPJ_T0005024.1 MGP_LPJ_G0004301.1 mouse_genomes_project 6 84797874 84798984 - 1700124L16Rik antisense antisense MGP_LPJ_T0005025.1 MGP_LPJ_G0004301.1 mouse_genomes_project 6 84797874 84798627 - 1700124L16Rik antisense antisense MGP_LPJ_T0005068.1 MGP_LPJ_G0004327.1 mouse_genomes_project 6 100037284 100169255 + Gm32592 antisense antisense MGP_LPJ_T0015282.1 MGP_LPJ_G0013373.1 mouse_genomes_project 6 46790729 46791603 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100901.1 MGP_LPJ_G0039164.1 mouse_genomes_project 6 71222071 71222207 + Gm23346 snoRNA snoRNA MGP_LPJ_T0077154.1 MGP_LPJ_G0030597.1 mouse_genomes_project 6 47361767 47414692 + MGP_LPJ_P0077154 Sspo protein_coding unknown_likely_coding MGP_LPJ_T0077155.1 MGP_LPJ_G0030597.1 mouse_genomes_project 6 47361767 47414685 + MGP_LPJ_P0077155 Sspo protein_coding protein_coding MGP_LPJ_T0077156.1 MGP_LPJ_G0030597.1 mouse_genomes_project 6 47361767 47414670 + MGP_LPJ_P0077156 Sspo protein_coding protein_coding MGP_LPJ_T0077157.1 MGP_LPJ_G0030597.1 mouse_genomes_project 6 47394056 47400942 + Sspo protein_coding retained_intron MGP_LPJ_T0077158.1 MGP_LPJ_G0030597.1 mouse_genomes_project 6 47401493 47414685 + MGP_LPJ_P0077158 Sspo protein_coding nonsense_mediated_decay MGP_LPJ_T0077159.1 MGP_LPJ_G0030597.1 mouse_genomes_project 6 47407214 47409641 + MGP_LPJ_P0077159 Sspo protein_coding protein_coding MGP_LPJ_T0076870.1 MGP_LPJ_G0030504.1 mouse_genomes_project 6 37997144 38011955 + MGP_LPJ_P0076870 Adck2 protein_coding protein_coding MGP_LPJ_T0076871.1 MGP_LPJ_G0030504.1 mouse_genomes_project 6 37997230 38007247 + MGP_LPJ_P0076871 Adck2 protein_coding protein_coding MGP_LPJ_T0076872.1 MGP_LPJ_G0030504.1 mouse_genomes_project 6 37997235 38010938 + MGP_LPJ_P0076872 Adck2 protein_coding protein_coding MGP_LPJ_T0076873.1 MGP_LPJ_G0030504.1 mouse_genomes_project 6 37998255 38003235 + Adck2 protein_coding retained_intron MGP_LPJ_T0076874.1 MGP_LPJ_G0030504.1 mouse_genomes_project 6 37999657 38005265 + MGP_LPJ_P0076874 Adck2 protein_coding nonsense_mediated_decay MGP_LPJ_T0076875.1 MGP_LPJ_G0030504.1 mouse_genomes_project 6 38007129 38009124 + Adck2 protein_coding retained_intron MGP_LPJ_T0076028.1 MGP_LPJ_G0030344.1 mouse_genomes_project 6 3415107 3441273 - MGP_LPJ_P0076028 Shfm1 protein_coding protein_coding MGP_LPJ_T0076029.1 MGP_LPJ_G0030344.1 mouse_genomes_project 6 3439028 3441278 - Shfm1 protein_coding retained_intron MGP_LPJ_T0077832.1 MGP_LPJ_G0030770.1 mouse_genomes_project 6 72801775 72805675 + 0610030E20Rik protein_coding retained_intron MGP_LPJ_T0077833.1 MGP_LPJ_G0030770.1 mouse_genomes_project 6 72801784 72803634 + 0610030E20Rik protein_coding retained_intron MGP_LPJ_T0077834.1 MGP_LPJ_G0030770.1 mouse_genomes_project 6 72801792 72808666 + MGP_LPJ_P0077834 0610030E20Rik protein_coding protein_coding MGP_LPJ_T0077835.1 MGP_LPJ_G0030770.1 mouse_genomes_project 6 72801825 72805076 + 0610030E20Rik protein_coding retained_intron MGP_LPJ_T0079974.1 MGP_LPJ_G0031186.1 mouse_genomes_project 6 128658161 128662026 - protein_coding retained_intron MGP_LPJ_T0079975.1 MGP_LPJ_G0031186.1 mouse_genomes_project 6 128659054 128662416 - MGP_LPJ_P0079975 protein_coding unknown_likely_coding MGP_LPJ_T0079976.1 MGP_LPJ_G0031186.1 mouse_genomes_project 6 128660314 128662626 - MGP_LPJ_P0079976 protein_coding protein_coding MGP_LPJ_T0079977.1 MGP_LPJ_G0031186.1 mouse_genomes_project 6 128660368 128662626 - protein_coding processed_transcript MGP_LPJ_T0079978.1 MGP_LPJ_G0031186.1 mouse_genomes_project 6 128661619 128662628 - protein_coding retained_intron MGP_LPJ_T0015264.1 MGP_LPJ_G0013355.1 mouse_genomes_project 6 40013191 40013567 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002070.1 MGP_LPJ_G0001980.1 mouse_genomes_project 6 84915292 84917511 + TEC TEC MGP_LPJ_T0100898.1 MGP_LPJ_G0039161.1 mouse_genomes_project 6 67904620 67904760 - Gm25910 snoRNA snoRNA MGP_LPJ_T0015543.1 MGP_LPJ_G0013634.1 mouse_genomes_project 6 126788699 126789459 + processed_pseudogene processed_pseudogene MGP_LPJ_T0076698.1 MGP_LPJ_G0030468.1 mouse_genomes_project 6 33084382 33092812 + Tmem140 protein_coding processed_transcript MGP_LPJ_T0076699.1 MGP_LPJ_G0030468.1 mouse_genomes_project 6 33084382 33096171 + MGP_LPJ_P0076699 Tmem140 protein_coding protein_coding MGP_LPJ_T0076700.1 MGP_LPJ_G0030468.1 mouse_genomes_project 6 33084498 33093838 + MGP_LPJ_P0076700 Tmem140 protein_coding protein_coding MGP_LPJ_T0076701.1 MGP_LPJ_G0030468.1 mouse_genomes_project 6 33088256 33090050 + Tmem140 protein_coding processed_transcript MGP_LPJ_T0076702.1 MGP_LPJ_G0030468.1 mouse_genomes_project 6 33088288 33093963 + MGP_LPJ_P0076702 Tmem140 protein_coding protein_coding MGP_LPJ_T0076705.1 MGP_LPJ_G0030468.1 mouse_genomes_project 6 33093938 33094780 + Tmem140 protein_coding processed_transcript MGP_LPJ_T0077186.1 MGP_LPJ_G0030605.1 mouse_genomes_project 6 47534965 47554046 + MGP_LPJ_P0077186 Zfp775 protein_coding protein_coding MGP_LPJ_T0077187.1 MGP_LPJ_G0030605.1 mouse_genomes_project 6 47538440 47550699 + MGP_LPJ_P0077187 Zfp775 protein_coding protein_coding MGP_LPJ_T0077188.1 MGP_LPJ_G0030605.1 mouse_genomes_project 6 47544136 47554046 + MGP_LPJ_P0077188 Zfp775 protein_coding protein_coding MGP_LPJ_T0002110.1 MGP_LPJ_G0002020.1 mouse_genomes_project 6 93260324 93262000 - TEC TEC MGP_LPJ_T0015388.1 MGP_LPJ_G0013479.1 mouse_genomes_project 6 71751312 71751711 + processed_pseudogene processed_pseudogene MGP_LPJ_T0077954.1 MGP_LPJ_G0030797.1 mouse_genomes_project 6 80632000 80632449 + MGP_LPJ_P0077954 Gm20594 protein_coding protein_coding MGP_LPJ_T0015249.1 MGP_LPJ_G0013340.1 mouse_genomes_project 6 35994699 35995656 - processed_pseudogene processed_pseudogene MGP_LPJ_T0078364.1 MGP_LPJ_G0030872.1 mouse_genomes_project 6 87748889 87772372 + MGP_LPJ_P0078364 Gm44790 protein_coding nonsense_mediated_decay MGP_LPJ_T0077548.1 MGP_LPJ_G0030698.1 mouse_genomes_project 6 56768962 56769997 - MGP_LPJ_P0077548 Vmn1r16 protein_coding protein_coding MGP_LPJ_T0002075.1 MGP_LPJ_G0001985.1 mouse_genomes_project 6 87826177 87829195 + TEC TEC MGP_LPJ_T0015469.1 MGP_LPJ_G0013560.1 mouse_genomes_project 6 103071464 103073111 + processed_pseudogene processed_pseudogene MGP_LPJ_T0079904.1 MGP_LPJ_G0031177.1 mouse_genomes_project 6 128450146 128457279 - MGP_LPJ_P0079904 Cops7a protein_coding protein_coding MGP_LPJ_T0079905.1 MGP_LPJ_G0031177.1 mouse_genomes_project 6 128450549 128457189 - MGP_LPJ_P0079905 Cops7a protein_coding protein_coding MGP_LPJ_T0079906.1 MGP_LPJ_G0031177.1 mouse_genomes_project 6 128450967 128451875 - Cops7a protein_coding retained_intron MGP_LPJ_T0079907.1 MGP_LPJ_G0031177.1 mouse_genomes_project 6 128451640 128457031 - MGP_LPJ_P0079907 Cops7a protein_coding protein_coding MGP_LPJ_T0079908.1 MGP_LPJ_G0031177.1 mouse_genomes_project 6 128452891 128457149 - MGP_LPJ_P0079908 Cops7a protein_coding protein_coding MGP_LPJ_T0079909.1 MGP_LPJ_G0031177.1 mouse_genomes_project 6 128454356 128456948 - MGP_LPJ_P0079909 Cops7a protein_coding protein_coding MGP_LPJ_T0079910.1 MGP_LPJ_G0031177.1 mouse_genomes_project 6 128456294 128457253 - Cops7a protein_coding retained_intron MGP_LPJ_T0015303.1 MGP_LPJ_G0013394.1 mouse_genomes_project 6 51325935 51326585 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008528.1 MGP_LPJ_G0006906.1 mouse_genomes_project 6 14078409 14091546 + Gm36669 lincRNA lincRNA MGP_LPJ_T0076335.1 MGP_LPJ_G0030409.1 mouse_genomes_project 6 23473312 23540171 - MGP_LPJ_P0076335 Pot1a protein_coding protein_coding MGP_LPJ_T0076336.1 MGP_LPJ_G0030409.1 mouse_genomes_project 6 23474076 23475764 - Pot1a protein_coding retained_intron MGP_LPJ_T0076337.1 MGP_LPJ_G0030409.1 mouse_genomes_project 6 23474156 23527925 - MGP_LPJ_P0076337 Pot1a protein_coding protein_coding MGP_LPJ_T0076338.1 MGP_LPJ_G0030409.1 mouse_genomes_project 6 23479103 23540171 - Pot1a protein_coding retained_intron MGP_LPJ_T0076339.1 MGP_LPJ_G0030409.1 mouse_genomes_project 6 23487985 23540140 - MGP_LPJ_P0076339 Pot1a protein_coding protein_coding MGP_LPJ_T0076340.1 MGP_LPJ_G0030409.1 mouse_genomes_project 6 23505983 23540167 - Pot1a protein_coding processed_transcript MGP_LPJ_T0076341.1 MGP_LPJ_G0030409.1 mouse_genomes_project 6 23524810 23540191 - Pot1a protein_coding retained_intron MGP_LPJ_T0076342.1 MGP_LPJ_G0030409.1 mouse_genomes_project 6 23528443 23540161 - Pot1a protein_coding retained_intron MGP_LPJ_T0076343.1 MGP_LPJ_G0030409.1 mouse_genomes_project 6 23530233 23531306 - Pot1a protein_coding processed_transcript MGP_LPJ_T0001970.1 MGP_LPJ_G0001880.1 mouse_genomes_project 6 27887911 27891522 - TEC TEC MGP_LPJ_T0080444.1 MGP_LPJ_G0031332.1 mouse_genomes_project 6 141411571 141416666 + BC049715 protein_coding retained_intron MGP_LPJ_T0080445.1 MGP_LPJ_G0031332.1 mouse_genomes_project 6 141411925 141445252 + MGP_LPJ_P0080445 BC049715 protein_coding protein_coding MGP_LPJ_T0080446.1 MGP_LPJ_G0031332.1 mouse_genomes_project 6 141412780 141445990 + MGP_LPJ_P0080446 BC049715 protein_coding protein_coding MGP_LPJ_T0080448.1 MGP_LPJ_G0031332.1 mouse_genomes_project 6 141445217 141445961 + MGP_LPJ_P0080448 BC049715 protein_coding protein_coding MGP_LPJ_T0005069.1 MGP_LPJ_G0004328.1 mouse_genomes_project 6 101735277 101742800 + Gm26748 antisense antisense MGP_LPJ_T0099674.1 MGP_LPJ_G0037937.1 mouse_genomes_project 6 121622123 121622224 + Gm25905 snRNA snRNA MGP_LPJ_T0080022.1 MGP_LPJ_G0031196.1 mouse_genomes_project 6 128871530 128891098 - MGP_LPJ_P0080022 Plekhg6 protein_coding protein_coding MGP_LPJ_T0076125.1 MGP_LPJ_G0030365.1 mouse_genomes_project 6 10659141 10713751 - MGP_LPJ_P0076125 Bmt2 protein_coding protein_coding MGP_LPJ_T0076126.1 MGP_LPJ_G0030365.1 mouse_genomes_project 6 10660276 10713723 - MGP_LPJ_P0076126 Bmt2 protein_coding protein_coding MGP_LPJ_T0078951.1 MGP_LPJ_G0030995.1 mouse_genomes_project 6 109104769 109124568 - MGP_LPJ_P0078951 Crbn protein_coding protein_coding MGP_LPJ_T0078952.1 MGP_LPJ_G0030995.1 mouse_genomes_project 6 109104769 109124559 - MGP_LPJ_P0078952 Crbn protein_coding protein_coding MGP_LPJ_T0078953.1 MGP_LPJ_G0030995.1 mouse_genomes_project 6 109108030 109123539 - MGP_LPJ_P0078953 Crbn protein_coding protein_coding MGP_LPJ_T0078954.1 MGP_LPJ_G0030995.1 mouse_genomes_project 6 109113312 109124555 - Crbn protein_coding retained_intron MGP_LPJ_T0078955.1 MGP_LPJ_G0030995.1 mouse_genomes_project 6 109121685 109124571 - Crbn protein_coding retained_intron MGP_LPJ_T0076323.1 MGP_LPJ_G0030403.1 mouse_genomes_project 6 22457591 22469635 + MGP_LPJ_P0076323 Hyal6 protein_coding protein_coding MGP_LPJ_T0005143.1 MGP_LPJ_G0004388.1 mouse_genomes_project 6 149711391 149733229 + Sox5os3 antisense antisense MGP_LPJ_T0005144.1 MGP_LPJ_G0004388.1 mouse_genomes_project 6 149719139 149732979 + Sox5os3 antisense antisense MGP_LPJ_T0076011.1 MGP_LPJ_G0030340.1 mouse_genomes_project 6 2175198 2230634 + MGP_LPJ_P0076011 Asb4 protein_coding protein_coding MGP_LPJ_T0076012.1 MGP_LPJ_G0030340.1 mouse_genomes_project 6 2182173 2194943 + MGP_LPJ_P0076012 Asb4 protein_coding protein_coding MGP_LPJ_T0077174.1 MGP_LPJ_G0030601.1 mouse_genomes_project 6 47522410 47523546 + MGP_LPJ_P0077174 Gm5111 protein_coding protein_coding MGP_LPJ_T0077175.1 MGP_LPJ_G0030601.1 mouse_genomes_project 6 47522553 47523480 + Gm5111 protein_coding retained_intron MGP_LPJ_T0002039.1 MGP_LPJ_G0001949.1 mouse_genomes_project 6 73075206 73077705 - TEC TEC MGP_LPJ_T0015599.1 MGP_LPJ_G0013690.1 mouse_genomes_project 6 138218044 138218713 + processed_pseudogene processed_pseudogene MGP_LPJ_T0078893.1 MGP_LPJ_G0030981.1 mouse_genomes_project 6 101632222 101675236 - MGP_LPJ_P0078893 Eif4e3 protein_coding protein_coding MGP_LPJ_T0008677.1 MGP_LPJ_G0007015.1 mouse_genomes_project 6 89157669 89159007 + Gm43904 lincRNA lincRNA MGP_LPJ_T0077056.1 MGP_LPJ_G0030574.1 mouse_genomes_project 6 41718138 41722660 + MGP_LPJ_P0077056 protein_coding protein_coding MGP_LPJ_T0079725.1 MGP_LPJ_G0031138.1 mouse_genomes_project 6 126428534 126445869 + MGP_LPJ_P0079725 Clec4a2 protein_coding protein_coding MGP_LPJ_T0079726.1 MGP_LPJ_G0031138.1 mouse_genomes_project 6 126444887 126450175 + MGP_LPJ_P0079726 Clec4a2 protein_coding protein_coding MGP_LPJ_T0079727.1 MGP_LPJ_G0031138.1 mouse_genomes_project 6 126444889 126457204 + MGP_LPJ_P0079727 Clec4a2 protein_coding protein_coding MGP_LPJ_T0079728.1 MGP_LPJ_G0031138.1 mouse_genomes_project 6 126445515 126459776 + MGP_LPJ_P0079728 Clec4a2 protein_coding protein_coding MGP_LPJ_T0079729.1 MGP_LPJ_G0031138.1 mouse_genomes_project 6 126445666 126457546 + MGP_LPJ_P0079729 Clec4a2 protein_coding protein_coding MGP_LPJ_T0015451.1 MGP_LPJ_G0013542.1 mouse_genomes_project 6 96081245 96081636 + processed_pseudogene processed_pseudogene MGP_LPJ_T0076278.1 MGP_LPJ_G0030390.1 mouse_genomes_project 6 20519573 20708084 + MGP_LPJ_P0076278 Ptprz1 protein_coding protein_coding MGP_LPJ_T0076279.1 MGP_LPJ_G0030390.1 mouse_genomes_project 6 20519783 20658204 + MGP_LPJ_P0076279 Ptprz1 protein_coding protein_coding MGP_LPJ_T0076280.1 MGP_LPJ_G0030390.1 mouse_genomes_project 6 20519838 20707785 + MGP_LPJ_P0076280 Ptprz1 protein_coding protein_coding MGP_LPJ_T0076281.1 MGP_LPJ_G0030390.1 mouse_genomes_project 6 20624028 20624463 + Ptprz1 protein_coding retained_intron MGP_LPJ_T0076282.1 MGP_LPJ_G0030390.1 mouse_genomes_project 6 20637573 20652923 + Ptprz1 protein_coding retained_intron MGP_LPJ_T0076283.1 MGP_LPJ_G0030390.1 mouse_genomes_project 6 20703460 20706692 + Ptprz1 protein_coding retained_intron MGP_LPJ_T0080608.1 MGP_LPJ_G0031365.1 mouse_genomes_project 6 147226229 147231744 + MGP_LPJ_P0080608 Iapp protein_coding protein_coding MGP_LPJ_T0080609.1 MGP_LPJ_G0031365.1 mouse_genomes_project 6 147226253 147226874 + Iapp protein_coding processed_transcript MGP_LPJ_T0015509.1 MGP_LPJ_G0013600.1 mouse_genomes_project 6 117782318 117783153 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002524.1 MGP_LPJ_G0002427.1 mouse_genomes_project 6 40059244 40059258 + MGP_LPJ_P0002524 Trbd2 TR_D_gene TR_D_gene MGP_LPJ_T0079714.1 MGP_LPJ_G0031132.1 mouse_genomes_project 6 126161428 126170457 - MGP_LPJ_P0079714 C3ar1 protein_coding protein_coding MGP_LPJ_T0002022.1 MGP_LPJ_G0001932.1 mouse_genomes_project 6 56332132 56335117 - TEC TEC MGP_LPJ_T0078225.1 MGP_LPJ_G0030845.1 mouse_genomes_project 6 86215004 86243334 - protein_coding lincRNA MGP_LPJ_T0078050.1 MGP_LPJ_G0030817.1 mouse_genomes_project 6 84108562 84109462 + MGP_LPJ_P0078050 Mrpl53 protein_coding protein_coding MGP_LPJ_T0078051.1 MGP_LPJ_G0030817.1 mouse_genomes_project 6 84108642 84109462 + Mrpl53 protein_coding retained_intron MGP_LPJ_T0080386.1 MGP_LPJ_G0031318.1 mouse_genomes_project 6 139482389 139502656 + MGP_LPJ_P0080386 Gprc5a protein_coding protein_coding MGP_LPJ_T0002161.1 MGP_LPJ_G0002070.1 mouse_genomes_project 6 123471963 123472435 - TEC TEC MGP_LPJ_T0000355.1 MGP_LPJ_G0000293.1 mouse_genomes_project 6 70130289 70130571 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0080862.1 MGP_LPJ_G0031410.1 mouse_genomes_project 6 154003152 154022552 - Ipo8 protein_coding retained_intron MGP_LPJ_T0080863.1 MGP_LPJ_G0031410.1 mouse_genomes_project 6 154003152 154067415 - MGP_LPJ_P0080863 Ipo8 protein_coding protein_coding MGP_LPJ_T0080864.1 MGP_LPJ_G0031410.1 mouse_genomes_project 6 154003162 154008079 - Ipo8 protein_coding retained_intron MGP_LPJ_T0080865.1 MGP_LPJ_G0031410.1 mouse_genomes_project 6 154008757 154011170 - Ipo8 protein_coding retained_intron MGP_LPJ_T0080866.1 MGP_LPJ_G0031410.1 mouse_genomes_project 6 154009366 154015237 - Ipo8 protein_coding retained_intron MGP_LPJ_T0080867.1 MGP_LPJ_G0031410.1 mouse_genomes_project 6 154017140 154032952 - Ipo8 protein_coding retained_intron MGP_LPJ_T0080868.1 MGP_LPJ_G0031410.1 mouse_genomes_project 6 154023503 154058638 - Ipo8 protein_coding retained_intron MGP_LPJ_T0080869.1 MGP_LPJ_G0031410.1 mouse_genomes_project 6 154036063 154051948 - Ipo8 protein_coding processed_transcript MGP_LPJ_T0080870.1 MGP_LPJ_G0031410.1 mouse_genomes_project 6 154036064 154067412 - MGP_LPJ_P0080870 Ipo8 protein_coding nonsense_mediated_decay MGP_LPJ_T0080871.1 MGP_LPJ_G0031410.1 mouse_genomes_project 6 154036066 154067374 - MGP_LPJ_P0080871 Ipo8 protein_coding protein_coding MGP_LPJ_T0080872.1 MGP_LPJ_G0031410.1 mouse_genomes_project 6 154053478 154056385 - Ipo8 protein_coding retained_intron MGP_LPJ_T0008805.1 MGP_LPJ_G0007111.1 mouse_genomes_project 6 154243953 154248021 + lincRNA lincRNA MGP_LPJ_T0015623.1 MGP_LPJ_G0013714.1 mouse_genomes_project 6 151896328 151898244 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100920.1 MGP_LPJ_G0039183.1 mouse_genomes_project 6 119471286 119471410 - Gm22882 snoRNA snoRNA MGP_LPJ_T0008785.1 MGP_LPJ_G0007095.1 mouse_genomes_project 6 148519501 148521050 - 4930579D09Rik lincRNA lincRNA MGP_LPJ_T0079600.1 MGP_LPJ_G0031109.1 mouse_genomes_project 6 123803032 123833049 - MGP_LPJ_P0079600 Bid protein_coding nonsense_mediated_decay MGP_LPJ_T0079601.1 MGP_LPJ_G0031109.1 mouse_genomes_project 6 123803956 123833066 - MGP_LPJ_P0079601 Bid protein_coding protein_coding MGP_LPJ_T0079602.1 MGP_LPJ_G0031109.1 mouse_genomes_project 6 123806718 123808669 - Bid protein_coding retained_intron MGP_LPJ_T0079603.1 MGP_LPJ_G0031109.1 mouse_genomes_project 6 123811323 123833011 - MGP_LPJ_P0079603 Bid protein_coding protein_coding MGP_LPJ_T0079604.1 MGP_LPJ_G0031109.1 mouse_genomes_project 6 123818123 123833016 - Bid protein_coding processed_transcript MGP_LPJ_T0079089.1 MGP_LPJ_G0031019.1 mouse_genomes_project 6 115932200 115944523 + MGP_LPJ_P0079089 Arpc4 protein_coding protein_coding MGP_LPJ_T0079090.1 MGP_LPJ_G0031019.1 mouse_genomes_project 6 115932245 115942857 + MGP_LPJ_P0079090 Arpc4 protein_coding protein_coding MGP_LPJ_T0015440.1 MGP_LPJ_G0013531.1 mouse_genomes_project 6 91725526 91726108 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100876.1 MGP_LPJ_G0039139.1 mouse_genomes_project 6 22937242 22937365 - Gm22529 snoRNA snoRNA MGP_LPJ_T0010839.1 MGP_LPJ_G0008957.1 mouse_genomes_project 6 140189069 140189174 + Gm22892 miRNA miRNA MGP_LPJ_T0002714.1 MGP_LPJ_G0002593.1 mouse_genomes_project 6 39632558 39633029 + MGP_LPJ_P0002714 Trbv15 TR_V_gene TR_V_gene MGP_LPJ_T0010832.1 MGP_LPJ_G0008950.1 mouse_genomes_project 6 128693905 128693992 + Mir3098 miRNA miRNA MGP_LPJ_T0001942.1 MGP_LPJ_G0001852.1 mouse_genomes_project 6 1732651 1732971 + TEC TEC MGP_LPJ_T0015452.1 MGP_LPJ_G0013543.1 mouse_genomes_project 6 96154185 96154601 + processed_pseudogene processed_pseudogene MGP_LPJ_T0075927.1 MGP_LPJ_G0030325.1 mouse_genomes_project 6 186012 224239 - MGP_LPJ_P0075927 Hepacam2 protein_coding protein_coding MGP_LPJ_T0075928.1 MGP_LPJ_G0030325.1 mouse_genomes_project 6 186311 217039 - Hepacam2 protein_coding retained_intron MGP_LPJ_T0075929.1 MGP_LPJ_G0030325.1 mouse_genomes_project 6 205701 217053 - MGP_LPJ_P0075929 Hepacam2 protein_coding protein_coding MGP_LPJ_T0075930.1 MGP_LPJ_G0030325.1 mouse_genomes_project 6 212943 227939 - MGP_LPJ_P0075930 Hepacam2 protein_coding protein_coding MGP_LPJ_T0075931.1 MGP_LPJ_G0030325.1 mouse_genomes_project 6 213230 217020 - Hepacam2 protein_coding retained_intron MGP_LPJ_T0000195.1 MGP_LPJ_G0000145.1 mouse_genomes_project 6 69556030 69556318 - MGP_LPJ_P0000195 Igkv4-53 IG_V_gene IG_V_gene MGP_LPJ_T0000196.1 MGP_LPJ_G0000145.1 mouse_genomes_project 6 69556030 69556526 - MGP_LPJ_P0000196 Igkv4-53 IG_V_gene IG_V_gene MGP_LPJ_T0077311.1 MGP_LPJ_G0030637.1 mouse_genomes_project 6 50618280 50627242 - MGP_LPJ_P0077311 Hnrnpa2b1 protein_coding protein_coding MGP_LPJ_T0077312.1 MGP_LPJ_G0030637.1 mouse_genomes_project 6 50618469 50627195 - MGP_LPJ_P0077312 Hnrnpa2b1 protein_coding nonsense_mediated_decay MGP_LPJ_T0077313.1 MGP_LPJ_G0030637.1 mouse_genomes_project 6 50618472 50627193 - MGP_LPJ_P0077313 Hnrnpa2b1 protein_coding nonsense_mediated_decay MGP_LPJ_T0077314.1 MGP_LPJ_G0030637.1 mouse_genomes_project 6 50618472 50627193 - MGP_LPJ_P0077314 Hnrnpa2b1 protein_coding protein_coding MGP_LPJ_T0077315.1 MGP_LPJ_G0030637.1 mouse_genomes_project 6 50618493 50620533 - Hnrnpa2b1 protein_coding retained_intron MGP_LPJ_T0077316.1 MGP_LPJ_G0030637.1 mouse_genomes_project 6 50620108 50627174 - MGP_LPJ_P0077316 Hnrnpa2b1 protein_coding protein_coding MGP_LPJ_T0077317.1 MGP_LPJ_G0030637.1 mouse_genomes_project 6 50620108 50627120 - MGP_LPJ_P0077317 Hnrnpa2b1 protein_coding protein_coding MGP_LPJ_T0077318.1 MGP_LPJ_G0030637.1 mouse_genomes_project 6 50620108 50627120 - MGP_LPJ_P0077318 Hnrnpa2b1 protein_coding protein_coding MGP_LPJ_T0077319.1 MGP_LPJ_G0030637.1 mouse_genomes_project 6 50620148 50621509 - Hnrnpa2b1 protein_coding retained_intron MGP_LPJ_T0077320.1 MGP_LPJ_G0030637.1 mouse_genomes_project 6 50620820 50624050 - MGP_LPJ_P0077320 Hnrnpa2b1 protein_coding protein_coding MGP_LPJ_T0077321.1 MGP_LPJ_G0030637.1 mouse_genomes_project 6 50621980 50623586 - Hnrnpa2b1 protein_coding retained_intron MGP_LPJ_T0077322.1 MGP_LPJ_G0030637.1 mouse_genomes_project 6 50622350 50624016 - Hnrnpa2b1 protein_coding retained_intron MGP_LPJ_T0077323.1 MGP_LPJ_G0030637.1 mouse_genomes_project 6 50623166 50627232 - Hnrnpa2b1 protein_coding retained_intron MGP_LPJ_T0000182.1 MGP_LPJ_G0000134.1 mouse_genomes_project 6 68663857 68682788 - MGP_LPJ_P0000182 Igkv10-96 IG_V_gene IG_V_gene MGP_LPJ_T0078279.1 MGP_LPJ_G0030857.1 mouse_genomes_project 6 86996223 87050331 - MGP_LPJ_P0078279 protein_coding protein_coding MGP_LPJ_T0078282.1 MGP_LPJ_G0030857.1 mouse_genomes_project 6 86996683 86998065 - MGP_LPJ_P0078282 protein_coding protein_coding MGP_LPJ_T0000324.1 MGP_LPJ_G0000262.1 mouse_genomes_project 6 68213204 68213671 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0002066.1 MGP_LPJ_G0001976.1 mouse_genomes_project 6 83982413 83983880 + TEC TEC MGP_LPJ_T0099680.1 MGP_LPJ_G0037943.1 mouse_genomes_project 6 129426449 129426559 + Gm24947 snRNA snRNA MGP_LPJ_T0077926.1 MGP_LPJ_G0030788.1 mouse_genomes_project 6 77157231 77158611 - MGP_LPJ_P0077926 protein_coding protein_coding MGP_LPJ_T0078379.1 MGP_LPJ_G0030877.1 mouse_genomes_project 6 88012330 88023032 - MGP_LPJ_P0078379 Snrnp27 protein_coding protein_coding MGP_LPJ_T0078380.1 MGP_LPJ_G0030877.1 mouse_genomes_project 6 88012584 88023001 - Snrnp27 protein_coding processed_transcript MGP_LPJ_T0078381.1 MGP_LPJ_G0030877.1 mouse_genomes_project 6 88012851 88023032 - MGP_LPJ_P0078381 Snrnp27 protein_coding protein_coding MGP_LPJ_T0078382.1 MGP_LPJ_G0030877.1 mouse_genomes_project 6 88021186 88023027 - Snrnp27 protein_coding processed_transcript MGP_LPJ_T0077353.1 MGP_LPJ_G0030647.1 mouse_genomes_project 6 51421655 51424495 - MGP_LPJ_P0077353 Hoxa5 protein_coding protein_coding MGP_LPJ_T0077524.1 MGP_LPJ_G0030685.1 mouse_genomes_project 6 56216815 56269354 + MGP_LPJ_P0077524 Fkbp9 protein_coding protein_coding MGP_LPJ_T0077525.1 MGP_LPJ_G0030685.1 mouse_genomes_project 6 56234469 56235803 + Fkbp9 protein_coding retained_intron MGP_LPJ_T0015227.1 MGP_LPJ_G0013318.1 mouse_genomes_project 6 20348848 20352534 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002143.1 MGP_LPJ_G0002053.1 mouse_genomes_project 6 110927721 110928905 - TEC TEC MGP_LPJ_T0078268.1 MGP_LPJ_G0030854.1 mouse_genomes_project 6 86631971 86665303 - MGP_LPJ_P0078268 Fbxo41 protein_coding protein_coding MGP_LPJ_T0078269.1 MGP_LPJ_G0030854.1 mouse_genomes_project 6 86631975 86665195 - MGP_LPJ_P0078269 Fbxo41 protein_coding protein_coding MGP_LPJ_T0078270.1 MGP_LPJ_G0030854.1 mouse_genomes_project 6 86631977 86665167 - MGP_LPJ_P0078270 Fbxo41 protein_coding protein_coding MGP_LPJ_T0011649.1 MGP_LPJ_G0009767.1 mouse_genomes_project 6 28771742 28771841 + Gm27568 misc_RNA misc_RNA MGP_LPJ_T0008800.1 MGP_LPJ_G0007107.1 mouse_genomes_project 6 153821282 153829486 - Gm6313 lincRNA lincRNA MGP_LPJ_T0008801.1 MGP_LPJ_G0007107.1 mouse_genomes_project 6 153821282 153824222 - Gm6313 lincRNA lincRNA MGP_LPJ_T0080296.1 MGP_LPJ_G0031284.1 mouse_genomes_project 6 136850690 136856653 + MGP_LPJ_P0080296 protein_coding protein_coding MGP_LPJ_T0078623.1 MGP_LPJ_G0030927.1 mouse_genomes_project 6 91524951 91525884 - MGP_LPJ_P0078623 Vmn1r49 protein_coding protein_coding MGP_LPJ_T0078624.1 MGP_LPJ_G0030927.1 mouse_genomes_project 6 91524951 91531723 - MGP_LPJ_P0078624 Vmn1r49 protein_coding protein_coding MGP_LPJ_T0015234.1 MGP_LPJ_G0013325.1 mouse_genomes_project 6 23723070 23723405 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015351.1 MGP_LPJ_G0013442.1 mouse_genomes_project 6 66102871 66106334 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015608.1 MGP_LPJ_G0013699.1 mouse_genomes_project 6 144826728 144827100 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011645.1 MGP_LPJ_G0009763.1 mouse_genomes_project 6 16470396 16470711 + Gm22718 misc_RNA misc_RNA MGP_LPJ_T0077673.1 MGP_LPJ_G0030735.1 mouse_genomes_project 6 65643235 65799880 + MGP_LPJ_P0077673 Prdm5 protein_coding protein_coding MGP_LPJ_T0077674.1 MGP_LPJ_G0030735.1 mouse_genomes_project 6 65643269 65698677 + Prdm5 protein_coding retained_intron MGP_LPJ_T0077675.1 MGP_LPJ_G0030735.1 mouse_genomes_project 6 65643269 65799877 + MGP_LPJ_P0077675 Prdm5 protein_coding protein_coding MGP_LPJ_T0077676.1 MGP_LPJ_G0030735.1 mouse_genomes_project 6 65643272 65799802 + MGP_LPJ_P0077676 Prdm5 protein_coding protein_coding MGP_LPJ_T0077677.1 MGP_LPJ_G0030735.1 mouse_genomes_project 6 65643341 65647437 + Prdm5 protein_coding retained_intron MGP_LPJ_T0077678.1 MGP_LPJ_G0030735.1 mouse_genomes_project 6 65643408 65799638 + MGP_LPJ_P0077678 Prdm5 protein_coding protein_coding MGP_LPJ_T0077679.1 MGP_LPJ_G0030735.1 mouse_genomes_project 6 65798594 65800514 + Prdm5 protein_coding retained_intron MGP_LPJ_T0015628.1 MGP_LPJ_G0013719.1 mouse_genomes_project 6 153917230 153917838 - processed_pseudogene processed_pseudogene MGP_LPJ_T0077520.1 MGP_LPJ_G0030684.1 mouse_genomes_project 6 56158143 56178381 - MGP_LPJ_P0077520 Kbtbd2 protein_coding protein_coding MGP_LPJ_T0077521.1 MGP_LPJ_G0030684.1 mouse_genomes_project 6 56158144 56178458 - MGP_LPJ_P0077521 Kbtbd2 protein_coding protein_coding MGP_LPJ_T0077522.1 MGP_LPJ_G0030684.1 mouse_genomes_project 6 56170063 56177924 - MGP_LPJ_P0077522 Kbtbd2 protein_coding protein_coding MGP_LPJ_T0077523.1 MGP_LPJ_G0030684.1 mouse_genomes_project 6 56170208 56177419 - Kbtbd2 protein_coding processed_transcript MGP_LPJ_T0079317.1 MGP_LPJ_G0031061.1 mouse_genomes_project 6 118672969 118801849 - MGP_LPJ_P0079317 Tmcc1 protein_coding protein_coding MGP_LPJ_T0079318.1 MGP_LPJ_G0031061.1 mouse_genomes_project 6 118675523 118764791 - MGP_LPJ_P0079318 Tmcc1 protein_coding protein_coding MGP_LPJ_T0079319.1 MGP_LPJ_G0031061.1 mouse_genomes_project 6 118675693 118797634 - MGP_LPJ_P0079319 Tmcc1 protein_coding protein_coding MGP_LPJ_T0079320.1 MGP_LPJ_G0031061.1 mouse_genomes_project 6 118675967 118797744 - MGP_LPJ_P0079320 Tmcc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0079321.1 MGP_LPJ_G0031061.1 mouse_genomes_project 6 118676345 118731069 - MGP_LPJ_P0079321 Tmcc1 protein_coding protein_coding MGP_LPJ_T0079322.1 MGP_LPJ_G0031061.1 mouse_genomes_project 6 118699214 118797217 - MGP_LPJ_P0079322 Tmcc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0079323.1 MGP_LPJ_G0031061.1 mouse_genomes_project 6 118708716 118714584 - Tmcc1 protein_coding retained_intron MGP_LPJ_T0079324.1 MGP_LPJ_G0031061.1 mouse_genomes_project 6 118761837 118768266 - Tmcc1 protein_coding retained_intron MGP_LPJ_T0079325.1 MGP_LPJ_G0031061.1 mouse_genomes_project 6 118794946 118839349 - MGP_LPJ_P0079325 Tmcc1 protein_coding protein_coding MGP_LPJ_T0079326.1 MGP_LPJ_G0031061.1 mouse_genomes_project 6 118796833 118798437 - Tmcc1 protein_coding retained_intron MGP_LPJ_T0015306.1 MGP_LPJ_G0013397.1 mouse_genomes_project 6 51968268 51968569 - processed_pseudogene processed_pseudogene MGP_LPJ_T0078662.1 MGP_LPJ_G0030940.1 mouse_genomes_project 6 92173487 92238567 - MGP_LPJ_P0078662 Iqsec1 protein_coding protein_coding MGP_LPJ_T0078663.1 MGP_LPJ_G0030940.1 mouse_genomes_project 6 92176953 92180598 - Iqsec1 protein_coding retained_intron MGP_LPJ_T0078664.1 MGP_LPJ_G0030940.1 mouse_genomes_project 6 92176953 92331871 - MGP_LPJ_P0078664 Iqsec1 protein_coding protein_coding MGP_LPJ_T0078665.1 MGP_LPJ_G0030940.1 mouse_genomes_project 6 92180937 92186953 - Iqsec1 protein_coding processed_transcript MGP_LPJ_T0078666.1 MGP_LPJ_G0030940.1 mouse_genomes_project 6 92181121 92186301 - Iqsec1 protein_coding processed_transcript MGP_LPJ_T0078667.1 MGP_LPJ_G0030940.1 mouse_genomes_project 6 92209167 92214055 - Iqsec1 protein_coding processed_transcript MGP_LPJ_T0078668.1 MGP_LPJ_G0030940.1 mouse_genomes_project 6 92209881 92286098 - MGP_LPJ_P0078668 Iqsec1 protein_coding protein_coding MGP_LPJ_T0078669.1 MGP_LPJ_G0030940.1 mouse_genomes_project 6 92210011 92258691 - Iqsec1 protein_coding processed_transcript MGP_LPJ_T0078670.1 MGP_LPJ_G0030940.1 mouse_genomes_project 6 92213957 92279530 - Iqsec1 protein_coding processed_transcript MGP_LPJ_T0015253.1 MGP_LPJ_G0013344.1 mouse_genomes_project 6 36624952 36625376 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002194.1 MGP_LPJ_G0002103.1 mouse_genomes_project 6 144362912 144364194 - TEC TEC MGP_LPJ_T0078426.1 MGP_LPJ_G0030884.1 mouse_genomes_project 6 88492683 88697608 - MGP_LPJ_P0078426 Antxr1 protein_coding protein_coding MGP_LPJ_T0078427.1 MGP_LPJ_G0030884.1 mouse_genomes_project 6 88492686 88670667 - MGP_LPJ_P0078427 Antxr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078428.1 MGP_LPJ_G0030884.1 mouse_genomes_project 6 88516511 88697568 - MGP_LPJ_P0078428 Antxr1 protein_coding protein_coding MGP_LPJ_T0078429.1 MGP_LPJ_G0030884.1 mouse_genomes_project 6 88537236 88697608 - MGP_LPJ_P0078429 Antxr1 protein_coding protein_coding MGP_LPJ_T0078430.1 MGP_LPJ_G0030884.1 mouse_genomes_project 6 88556880 88631154 - Antxr1 protein_coding processed_transcript MGP_LPJ_T0078431.1 MGP_LPJ_G0030884.1 mouse_genomes_project 6 88641433 88697702 - Antxr1 protein_coding retained_intron MGP_LPJ_T0077453.1 MGP_LPJ_G0030669.1 mouse_genomes_project 6 54251591 54306539 - MGP_LPJ_P0077453 Nod1 protein_coding protein_coding MGP_LPJ_T0077454.1 MGP_LPJ_G0030669.1 mouse_genomes_project 6 54251591 54307490 - MGP_LPJ_P0077454 Nod1 protein_coding protein_coding MGP_LPJ_T0077455.1 MGP_LPJ_G0030669.1 mouse_genomes_project 6 54252401 54255741 - Nod1 protein_coding processed_transcript MGP_LPJ_T0077456.1 MGP_LPJ_G0030669.1 mouse_genomes_project 6 54255731 54271124 - MGP_LPJ_P0077456 Nod1 protein_coding protein_coding MGP_LPJ_T0077457.1 MGP_LPJ_G0030669.1 mouse_genomes_project 6 54265024 54267522 - Nod1 protein_coding processed_transcript MGP_LPJ_T0077458.1 MGP_LPJ_G0030669.1 mouse_genomes_project 6 54277142 54299753 - MGP_LPJ_P0077458 Nod1 protein_coding protein_coding MGP_LPJ_T0077543.1 MGP_LPJ_G0030693.1 mouse_genomes_project 6 56589456 56595627 + MGP_LPJ_P0077543 Vmn1r11 protein_coding protein_coding MGP_LPJ_T0000191.1 MGP_LPJ_G0000141.1 mouse_genomes_project 6 68925368 68926135 - MGP_LPJ_P0000191 Igkv1-88 IG_V_gene IG_V_gene MGP_LPJ_T0005651.1 MGP_LPJ_G0004760.1 mouse_genomes_project 6 89051595 89058500 + E230015B07Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_LPJ_T0005652.1 MGP_LPJ_G0004760.1 mouse_genomes_project 6 89051643 89059451 + E230015B07Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_LPJ_T0005653.1 MGP_LPJ_G0004760.1 mouse_genomes_project 6 89051643 89060238 + E230015B07Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_LPJ_T0000246.1 MGP_LPJ_G0000185.1 mouse_genomes_project 6 70871324 70957030 + MGP_LPJ_P0000246 Igkv3-2 IG_V_gene IG_V_gene MGP_LPJ_T0015601.1 MGP_LPJ_G0013692.1 mouse_genomes_project 6 139553412 139553792 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002001.1 MGP_LPJ_G0001911.1 mouse_genomes_project 6 44789976 44793914 + TEC TEC MGP_LPJ_T0078765.1 MGP_LPJ_G0030958.1 mouse_genomes_project 6 93965577 94320365 - MGP_LPJ_P0078765 Prickle2 protein_coding protein_coding MGP_LPJ_T0078766.1 MGP_LPJ_G0030958.1 mouse_genomes_project 6 93965577 94171511 - MGP_LPJ_P0078766 Prickle2 protein_coding protein_coding MGP_LPJ_T0078767.1 MGP_LPJ_G0030958.1 mouse_genomes_project 6 93965579 94138174 - MGP_LPJ_P0078767 Prickle2 protein_coding protein_coding MGP_LPJ_T0078768.1 MGP_LPJ_G0030958.1 mouse_genomes_project 6 93970047 94082246 - MGP_LPJ_P0078768 Prickle2 protein_coding protein_coding MGP_LPJ_T0015555.1 MGP_LPJ_G0013646.1 mouse_genomes_project 6 130581181 130581459 + processed_pseudogene processed_pseudogene MGP_LPJ_T0077940.1 MGP_LPJ_G0030791.1 mouse_genomes_project 6 79102526 79104768 + MGP_LPJ_P0077940 Reg3b protein_coding protein_coding MGP_LPJ_T0077941.1 MGP_LPJ_G0030791.1 mouse_genomes_project 6 79102730 79105336 + MGP_LPJ_P0077941 Reg3b protein_coding protein_coding MGP_LPJ_T0077942.1 MGP_LPJ_G0030791.1 mouse_genomes_project 6 79102767 79104778 + MGP_LPJ_P0077942 Reg3b protein_coding protein_coding MGP_LPJ_T0077943.1 MGP_LPJ_G0030791.1 mouse_genomes_project 6 79104400 79105288 + Reg3b protein_coding retained_intron MGP_LPJ_T0100935.1 MGP_LPJ_G0039198.1 mouse_genomes_project 6 135625366 135625500 - Gm22362 snoRNA snoRNA MGP_LPJ_T0079312.1 MGP_LPJ_G0031060.1 mouse_genomes_project 6 118605944 118647847 - MGP_LPJ_P0079312 Plxnd1 protein_coding protein_coding MGP_LPJ_T0079313.1 MGP_LPJ_G0031060.1 mouse_genomes_project 6 118606774 118607978 - Plxnd1 protein_coding retained_intron MGP_LPJ_T0079314.1 MGP_LPJ_G0031060.1 mouse_genomes_project 6 118606940 118607504 - Plxnd1 protein_coding retained_intron MGP_LPJ_T0079315.1 MGP_LPJ_G0031060.1 mouse_genomes_project 6 118609702 118611167 - Plxnd1 protein_coding retained_intron MGP_LPJ_T0079316.1 MGP_LPJ_G0031060.1 mouse_genomes_project 6 118618098 118620562 - MGP_LPJ_P0079316 Plxnd1 protein_coding protein_coding MGP_LPJ_T0000249.1 MGP_LPJ_G0000188.1 mouse_genomes_project 6 70924021 70928480 + MGP_LPJ_P0000249 Igkv3-5 IG_V_gene IG_V_gene MGP_LPJ_T0002728.1 MGP_LPJ_G0002603.1 mouse_genomes_project 6 40075894 40076575 - MGP_LPJ_P0002728 Trbv31 TR_V_gene TR_V_gene MGP_LPJ_T0002729.1 MGP_LPJ_G0002603.1 mouse_genomes_project 6 40075896 40076656 - MGP_LPJ_P0002729 Trbv31 TR_V_gene TR_V_gene MGP_LPJ_T0076312.1 MGP_LPJ_G0030399.1 mouse_genomes_project 6 22243888 22248089 - Ndufa5 protein_coding retained_intron MGP_LPJ_T0076313.1 MGP_LPJ_G0030399.1 mouse_genomes_project 6 22243888 22252793 - MGP_LPJ_P0076313 Ndufa5 protein_coding protein_coding MGP_LPJ_T0076314.1 MGP_LPJ_G0030399.1 mouse_genomes_project 6 22243888 22253236 - MGP_LPJ_P0076314 Ndufa5 protein_coding protein_coding MGP_LPJ_T0076315.1 MGP_LPJ_G0030399.1 mouse_genomes_project 6 22243889 22252749 - Ndufa5 protein_coding processed_transcript MGP_LPJ_T0004998.1 MGP_LPJ_G0004287.1 mouse_genomes_project 6 72391373 72394004 - Gm26628 antisense antisense MGP_LPJ_T0008690.1 MGP_LPJ_G0007023.1 mouse_genomes_project 6 91995094 92028220 + lincRNA lincRNA MGP_LPJ_T0005026.1 MGP_LPJ_G0004302.1 mouse_genomes_project 6 85055770 85058990 - Gm43918 antisense antisense MGP_LPJ_T0008803.1 MGP_LPJ_G0007109.1 mouse_genomes_project 6 153920492 153935809 + Gm44115 lincRNA lincRNA MGP_LPJ_T0078857.1 MGP_LPJ_G0030978.1 mouse_genomes_project 6 100155583 100271209 - MGP_LPJ_P0078857 Gm765 protein_coding protein_coding MGP_LPJ_T0078858.1 MGP_LPJ_G0030978.1 mouse_genomes_project 6 100269917 100271114 - Gm765 protein_coding retained_intron MGP_LPJ_T0015347.1 MGP_LPJ_G0013438.1 mouse_genomes_project 6 65620771 65621158 + processed_pseudogene processed_pseudogene MGP_LPJ_T0080735.1 MGP_LPJ_G0031385.1 mouse_genomes_project 6 150465862 150732022 - MGP_LPJ_P0080735 Lmntd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0080736.1 MGP_LPJ_G0031385.1 mouse_genomes_project 6 150497832 150534925 - MGP_LPJ_P0080736 Lmntd1 protein_coding protein_coding MGP_LPJ_T0080737.1 MGP_LPJ_G0031385.1 mouse_genomes_project 6 150531164 150535241 - MGP_LPJ_P0080737 Lmntd1 protein_coding protein_coding MGP_LPJ_T0080738.1 MGP_LPJ_G0031385.1 mouse_genomes_project 6 150656899 150732068 - Lmntd1 protein_coding processed_transcript MGP_LPJ_T0080739.1 MGP_LPJ_G0031385.1 mouse_genomes_project 6 150697038 150731718 - Lmntd1 protein_coding processed_transcript MGP_LPJ_T0011633.1 MGP_LPJ_G0009751.1 mouse_genomes_project 6 3683995 3684202 + Gm27905 misc_RNA misc_RNA MGP_LPJ_T0080792.1 MGP_LPJ_G0031396.1 mouse_genomes_project 6 151834304 151888372 + MGP_LPJ_P0080792 Stk38l protein_coding protein_coding MGP_LPJ_T0080793.1 MGP_LPJ_G0031396.1 mouse_genomes_project 6 151834580 151869768 + MGP_LPJ_P0080793 Stk38l protein_coding protein_coding MGP_LPJ_T0080794.1 MGP_LPJ_G0031396.1 mouse_genomes_project 6 151869677 151892495 + MGP_LPJ_P0080794 Stk38l protein_coding protein_coding MGP_LPJ_T0102212.1 MGP_LPJ_G0040249.1 mouse_genomes_project 6 39270211 39345412 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0010808.1 MGP_LPJ_G0008926.1 mouse_genomes_project 6 96352867 96352919 - Mir7041 miRNA miRNA MGP_LPJ_T0079492.1 MGP_LPJ_G0031093.1 mouse_genomes_project 6 122295759 122299691 + MGP_LPJ_P0079492 Fbxl14 protein_coding protein_coding MGP_LPJ_T0000332.1 MGP_LPJ_G0000270.1 mouse_genomes_project 6 68509351 68509650 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0005079.1 MGP_LPJ_G0004334.1 mouse_genomes_project 6 113086812 113092990 - Gm20387 antisense antisense MGP_LPJ_T0078769.1 MGP_LPJ_G0030959.1 mouse_genomes_project 6 94397982 94571901 - MGP_LPJ_P0078769 Adamts9 protein_coding protein_coding MGP_LPJ_T0078770.1 MGP_LPJ_G0030959.1 mouse_genomes_project 6 94415652 94487381 - Adamts9 protein_coding retained_intron MGP_LPJ_T0078773.1 MGP_LPJ_G0030959.1 mouse_genomes_project 6 94469695 94487391 - Adamts9 protein_coding retained_intron MGP_LPJ_T0078774.1 MGP_LPJ_G0030959.1 mouse_genomes_project 6 94478024 94481862 - Adamts9 protein_coding retained_intron MGP_LPJ_T0078776.1 MGP_LPJ_G0030959.1 mouse_genomes_project 6 94554187 94572238 - Adamts9 protein_coding processed_transcript MGP_LPJ_T0015392.1 MGP_LPJ_G0013483.1 mouse_genomes_project 6 72347829 72348775 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008652.1 MGP_LPJ_G0006996.1 mouse_genomes_project 6 80486402 80513465 + Gm44271 lincRNA lincRNA MGP_LPJ_T0078607.1 MGP_LPJ_G0030916.1 mouse_genomes_project 6 90864752 91076068 - MGP_LPJ_P0078607 Chchd6 protein_coding protein_coding MGP_LPJ_T0078608.1 MGP_LPJ_G0030916.1 mouse_genomes_project 6 90864757 91076068 - MGP_LPJ_P0078608 Chchd6 protein_coding protein_coding MGP_LPJ_T0078609.1 MGP_LPJ_G0030916.1 mouse_genomes_project 6 90899654 91076020 - Chchd6 protein_coding retained_intron MGP_LPJ_T0078610.1 MGP_LPJ_G0030916.1 mouse_genomes_project 6 91048077 91076027 - MGP_LPJ_P0078610 Chchd6 protein_coding nonsense_mediated_decay MGP_LPJ_T0002010.1 MGP_LPJ_G0001920.1 mouse_genomes_project 6 48234130 48237064 + TEC TEC MGP_LPJ_T0078067.1 MGP_LPJ_G0030821.1 mouse_genomes_project 6 84134364 84149784 + MGP_LPJ_P0078067 Rtkn protein_coding protein_coding MGP_LPJ_T0078068.1 MGP_LPJ_G0030821.1 mouse_genomes_project 6 84134713 84152796 + MGP_LPJ_P0078068 Rtkn protein_coding protein_coding MGP_LPJ_T0078069.1 MGP_LPJ_G0030821.1 mouse_genomes_project 6 84136000 84152796 + MGP_LPJ_P0078069 Rtkn protein_coding protein_coding MGP_LPJ_T0078070.1 MGP_LPJ_G0030821.1 mouse_genomes_project 6 84136021 84152796 + MGP_LPJ_P0078070 Rtkn protein_coding protein_coding MGP_LPJ_T0078071.1 MGP_LPJ_G0030821.1 mouse_genomes_project 6 84137086 84152801 + MGP_LPJ_P0078071 Rtkn protein_coding unknown_likely_coding MGP_LPJ_T0078072.1 MGP_LPJ_G0030821.1 mouse_genomes_project 6 84142629 84148380 + MGP_LPJ_P0078072 Rtkn protein_coding protein_coding MGP_LPJ_T0078073.1 MGP_LPJ_G0030821.1 mouse_genomes_project 6 84142801 84147902 + MGP_LPJ_P0078073 Rtkn protein_coding protein_coding MGP_LPJ_T0078074.1 MGP_LPJ_G0030821.1 mouse_genomes_project 6 84148061 84150466 + Rtkn protein_coding retained_intron MGP_LPJ_T0078076.1 MGP_LPJ_G0030821.1 mouse_genomes_project 6 84150971 84152425 + Rtkn protein_coding retained_intron MGP_LPJ_T0075985.1 MGP_LPJ_G0030336.1 mouse_genomes_project 6 1672990 1943737 + MGP_LPJ_P0075985 Ppp1r9a protein_coding protein_coding MGP_LPJ_T0075986.1 MGP_LPJ_G0030336.1 mouse_genomes_project 6 1673047 1858815 + MGP_LPJ_P0075986 Ppp1r9a protein_coding protein_coding MGP_LPJ_T0075987.1 MGP_LPJ_G0030336.1 mouse_genomes_project 6 1673091 1944368 + MGP_LPJ_P0075987 Ppp1r9a protein_coding nonsense_mediated_decay MGP_LPJ_T0075988.1 MGP_LPJ_G0030336.1 mouse_genomes_project 6 1674288 1949811 + MGP_LPJ_P0075988 Ppp1r9a protein_coding protein_coding MGP_LPJ_T0075989.1 MGP_LPJ_G0030336.1 mouse_genomes_project 6 1674341 1787035 + MGP_LPJ_P0075989 Ppp1r9a protein_coding protein_coding MGP_LPJ_T0075990.1 MGP_LPJ_G0030336.1 mouse_genomes_project 6 1674400 1948663 + Ppp1r9a protein_coding retained_intron MGP_LPJ_T0075991.1 MGP_LPJ_G0030336.1 mouse_genomes_project 6 1674756 1677756 + MGP_LPJ_P0075991 Ppp1r9a protein_coding protein_coding MGP_LPJ_T0075992.1 MGP_LPJ_G0030336.1 mouse_genomes_project 6 1676384 1943956 + MGP_LPJ_P0075992 Ppp1r9a protein_coding nonsense_mediated_decay MGP_LPJ_T0075993.1 MGP_LPJ_G0030336.1 mouse_genomes_project 6 1676384 1943964 + MGP_LPJ_P0075993 Ppp1r9a protein_coding protein_coding MGP_LPJ_T0075994.1 MGP_LPJ_G0030336.1 mouse_genomes_project 6 1677375 1938397 + MGP_LPJ_P0075994 Ppp1r9a protein_coding nonsense_mediated_decay MGP_LPJ_T0075995.1 MGP_LPJ_G0030336.1 mouse_genomes_project 6 1893261 1896390 + Ppp1r9a protein_coding processed_transcript MGP_LPJ_T0075996.1 MGP_LPJ_G0030336.1 mouse_genomes_project 6 1896061 1899111 + Ppp1r9a protein_coding retained_intron MGP_LPJ_T0002172.1 MGP_LPJ_G0002081.1 mouse_genomes_project 6 131407223 131409472 - TEC TEC MGP_LPJ_T0010804.1 MGP_LPJ_G0008922.1 mouse_genomes_project 6 87907710 87907772 - Gm22184 miRNA miRNA MGP_LPJ_T0000168.1 MGP_LPJ_G0000125.1 mouse_genomes_project 6 68067151 68067625 + MGP_LPJ_P0000168 Igkv9-120 IG_V_gene IG_V_gene MGP_LPJ_T0000169.1 MGP_LPJ_G0000125.1 mouse_genomes_project 6 68067338 68067625 + MGP_LPJ_P0000169 Igkv9-120 IG_V_gene IG_V_gene MGP_LPJ_T0080297.1 MGP_LPJ_G0031285.1 mouse_genomes_project 6 136850690 136867946 + MGP_LPJ_P0080297 protein_coding protein_coding MGP_LPJ_T0008613.1 MGP_LPJ_G0006963.1 mouse_genomes_project 6 51308391 51320526 + Halr1 lincRNA lincRNA MGP_LPJ_T0008614.1 MGP_LPJ_G0006963.1 mouse_genomes_project 6 51308436 51321670 + Halr1 lincRNA lincRNA MGP_LPJ_T0008615.1 MGP_LPJ_G0006963.1 mouse_genomes_project 6 51308445 51320186 + Halr1 lincRNA lincRNA MGP_LPJ_T0002030.1 MGP_LPJ_G0001940.1 mouse_genomes_project 6 71673576 71676431 + TEC TEC MGP_LPJ_T0002187.1 MGP_LPJ_G0002096.1 mouse_genomes_project 6 139740704 139740960 - TEC TEC MGP_LPJ_T0015489.1 MGP_LPJ_G0013580.1 mouse_genomes_project 6 111798642 111799267 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005001.1 MGP_LPJ_G0004289.1 mouse_genomes_project 6 72801487 72802917 - Gm45051 antisense antisense MGP_LPJ_T0015614.1 MGP_LPJ_G0013705.1 mouse_genomes_project 6 145884221 145884337 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015559.1 MGP_LPJ_G0013650.1 mouse_genomes_project 6 130979036 130979569 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102270.1 MGP_LPJ_G0040307.1 mouse_genomes_project 6 134900808 135108682 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0005126.1 MGP_LPJ_G0004373.1 mouse_genomes_project 6 138676453 138774075 - Gm44293 antisense antisense MGP_LPJ_T0079508.1 MGP_LPJ_G0031095.1 mouse_genomes_project 6 122746824 122757382 + Rad52 protein_coding processed_transcript MGP_LPJ_T0079509.1 MGP_LPJ_G0031095.1 mouse_genomes_project 6 122746829 122764680 + MGP_LPJ_P0079509 Rad52 protein_coding nonsense_mediated_decay MGP_LPJ_T0079510.1 MGP_LPJ_G0031095.1 mouse_genomes_project 6 122746831 122755771 + Rad52 protein_coding retained_intron MGP_LPJ_T0079511.1 MGP_LPJ_G0031095.1 mouse_genomes_project 6 122746831 122755144 + Rad52 protein_coding processed_transcript MGP_LPJ_T0079512.1 MGP_LPJ_G0031095.1 mouse_genomes_project 6 122746854 122763369 + Rad52 protein_coding retained_intron MGP_LPJ_T0079513.1 MGP_LPJ_G0031095.1 mouse_genomes_project 6 122746860 122761148 + Rad52 protein_coding processed_transcript MGP_LPJ_T0079514.1 MGP_LPJ_G0031095.1 mouse_genomes_project 6 122746860 122761148 + Rad52 protein_coding processed_transcript MGP_LPJ_T0079515.1 MGP_LPJ_G0031095.1 mouse_genomes_project 6 122746865 122762867 + Rad52 protein_coding retained_intron MGP_LPJ_T0079516.1 MGP_LPJ_G0031095.1 mouse_genomes_project 6 122746902 122764675 + MGP_LPJ_P0079516 Rad52 protein_coding protein_coding MGP_LPJ_T0079517.1 MGP_LPJ_G0031095.1 mouse_genomes_project 6 122746953 122764385 + MGP_LPJ_P0079517 Rad52 protein_coding unknown_likely_coding MGP_LPJ_T0079518.1 MGP_LPJ_G0031095.1 mouse_genomes_project 6 122755284 122756265 + Rad52 protein_coding retained_intron MGP_LPJ_T0079519.1 MGP_LPJ_G0031095.1 mouse_genomes_project 6 122755997 122760766 + Rad52 protein_coding retained_intron MGP_LPJ_T0079520.1 MGP_LPJ_G0031095.1 mouse_genomes_project 6 122757298 122760911 + Rad52 protein_coding retained_intron MGP_LPJ_T0079521.1 MGP_LPJ_G0031095.1 mouse_genomes_project 6 122760061 122763614 + Rad52 protein_coding retained_intron MGP_LPJ_T0078616.1 MGP_LPJ_G0030921.1 mouse_genomes_project 6 91319005 91320074 - MGP_LPJ_P0078616 Vmn1r43 protein_coding protein_coding MGP_LPJ_T0015478.1 MGP_LPJ_G0013569.1 mouse_genomes_project 6 107351644 107353568 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015432.1 MGP_LPJ_G0013523.1 mouse_genomes_project 6 87143042 87143678 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015483.1 MGP_LPJ_G0013574.1 mouse_genomes_project 6 110228602 110229214 + processed_pseudogene processed_pseudogene MGP_LPJ_T0080311.1 MGP_LPJ_G0031298.1 mouse_genomes_project 6 137184078 137185008 - MGP_LPJ_P0080311 Tas2r113 protein_coding protein_coding MGP_LPJ_T0077550.1 MGP_LPJ_G0030700.1 mouse_genomes_project 6 56832728 56833815 - MGP_LPJ_P0077550 Vmn1r18 protein_coding protein_coding MGP_LPJ_T0080401.1 MGP_LPJ_G0031323.1 mouse_genomes_project 6 139738375 139739654 - MGP_LPJ_P0080401 Pbp2 protein_coding protein_coding MGP_LPJ_T0002120.1 MGP_LPJ_G0002030.1 mouse_genomes_project 6 95120062 95120545 - TEC TEC MGP_LPJ_T0101393.1 MGP_LPJ_G0039579.1 mouse_genomes_project 6 150488154 150502636 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101394.1 MGP_LPJ_G0039579.1 mouse_genomes_project 6 150488155 150492801 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101395.1 MGP_LPJ_G0039579.1 mouse_genomes_project 6 150490867 150492609 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101396.1 MGP_LPJ_G0039579.1 mouse_genomes_project 6 150491985 150492726 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0018202.1 MGP_LPJ_G0015545.1 mouse_genomes_project 6 47804739 47820693 - Gm44764 processed_transcript lincRNA MGP_LPJ_T0018203.1 MGP_LPJ_G0015545.1 mouse_genomes_project 6 47819880 47820700 - Gm44764 processed_transcript retained_intron MGP_LPJ_T0002170.1 MGP_LPJ_G0002079.1 mouse_genomes_project 6 130929271 130929641 - TEC TEC MGP_LPJ_T0100875.1 MGP_LPJ_G0039138.1 mouse_genomes_project 6 22823062 22823194 - Gm24443 snoRNA snoRNA MGP_LPJ_T0005067.1 MGP_LPJ_G0004326.1 mouse_genomes_project 6 96889264 96892884 - Kbtbd8os antisense antisense MGP_LPJ_T0098283.1 MGP_LPJ_G0036564.1 mouse_genomes_project 6 9743535 9743655 + n-R5s160 rRNA rRNA MGP_LPJ_T0005124.1 MGP_LPJ_G0004371.1 mouse_genomes_project 6 138529696 138532826 - Gm17088 antisense antisense MGP_LPJ_T0015260.1 MGP_LPJ_G0013351.1 mouse_genomes_project 6 39500442 39500630 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000223.1 MGP_LPJ_G0000168.1 mouse_genomes_project 6 70255579 70256147 - MGP_LPJ_P0000223 Igkv7-33 IG_V_gene IG_V_gene MGP_LPJ_T0000224.1 MGP_LPJ_G0000168.1 mouse_genomes_project 6 70255579 70256147 - MGP_LPJ_P0000224 Igkv7-33 IG_V_gene IG_V_gene MGP_LPJ_T0000156.1 MGP_LPJ_G0000116.1 mouse_genomes_project 6 67753472 67754209 - MGP_LPJ_P0000156 Igkv1-131 IG_V_gene IG_V_gene MGP_LPJ_T0015232.1 MGP_LPJ_G0013323.1 mouse_genomes_project 6 22559091 22559921 + processed_pseudogene processed_pseudogene MGP_LPJ_T0080102.1 MGP_LPJ_G0031214.1 mouse_genomes_project 6 131178419 131253491 + MGP_LPJ_P0080102 Cracr2a protein_coding protein_coding MGP_LPJ_T0080103.1 MGP_LPJ_G0031214.1 mouse_genomes_project 6 131194916 131253396 + MGP_LPJ_P0080103 Cracr2a protein_coding protein_coding MGP_LPJ_T0011632.1 MGP_LPJ_G0009750.1 mouse_genomes_project 6 3683808 3683988 + Gm27699 misc_RNA misc_RNA MGP_LPJ_T0079083.1 MGP_LPJ_G0031018.1 mouse_genomes_project 6 115920739 115931605 - MGP_LPJ_P0079083 Tada3 protein_coding protein_coding MGP_LPJ_T0079084.1 MGP_LPJ_G0031018.1 mouse_genomes_project 6 115920752 115931655 - MGP_LPJ_P0079084 Tada3 protein_coding protein_coding MGP_LPJ_T0079085.1 MGP_LPJ_G0031018.1 mouse_genomes_project 6 115921000 115925244 - Tada3 protein_coding retained_intron MGP_LPJ_T0079086.1 MGP_LPJ_G0031018.1 mouse_genomes_project 6 115928473 115931827 - Tada3 protein_coding retained_intron MGP_LPJ_T0079087.1 MGP_LPJ_G0031018.1 mouse_genomes_project 6 115928570 115931827 - Tada3 protein_coding retained_intron MGP_LPJ_T0079088.1 MGP_LPJ_G0031018.1 mouse_genomes_project 6 115930091 115931844 - MGP_LPJ_P0079088 Tada3 protein_coding protein_coding MGP_LPJ_T0015353.1 MGP_LPJ_G0013444.1 mouse_genomes_project 6 66250753 66250979 + processed_pseudogene processed_pseudogene MGP_LPJ_T0080762.1 MGP_LPJ_G0031391.1 mouse_genomes_project 6 151662140 151667167 - MGP_LPJ_P0080762 Asun protein_coding protein_coding MGP_LPJ_T0080763.1 MGP_LPJ_G0031391.1 mouse_genomes_project 6 151662140 151669852 - MGP_LPJ_P0080763 Asun protein_coding protein_coding MGP_LPJ_T0080764.1 MGP_LPJ_G0031391.1 mouse_genomes_project 6 151662140 151693929 - MGP_LPJ_P0080764 Asun protein_coding protein_coding MGP_LPJ_T0080765.1 MGP_LPJ_G0031391.1 mouse_genomes_project 6 151662149 151663888 - Asun protein_coding retained_intron MGP_LPJ_T0080766.1 MGP_LPJ_G0031391.1 mouse_genomes_project 6 151662439 151662910 - Asun protein_coding retained_intron MGP_LPJ_T0080767.1 MGP_LPJ_G0031391.1 mouse_genomes_project 6 151662602 151666567 - Asun protein_coding retained_intron MGP_LPJ_T0080768.1 MGP_LPJ_G0031391.1 mouse_genomes_project 6 151665014 151668764 - Asun protein_coding processed_transcript MGP_LPJ_T0080769.1 MGP_LPJ_G0031391.1 mouse_genomes_project 6 151666613 151667336 - Asun protein_coding retained_intron MGP_LPJ_T0080770.1 MGP_LPJ_G0031391.1 mouse_genomes_project 6 151667527 151692358 - MGP_LPJ_P0080770 Asun protein_coding protein_coding MGP_LPJ_T0080771.1 MGP_LPJ_G0031391.1 mouse_genomes_project 6 151676527 151679861 - Asun protein_coding retained_intron MGP_LPJ_T0080772.1 MGP_LPJ_G0031391.1 mouse_genomes_project 6 151689261 151693874 - Asun protein_coding retained_intron MGP_LPJ_T0080313.1 MGP_LPJ_G0031300.1 mouse_genomes_project 6 137217384 137218302 - MGP_LPJ_P0080313 Tas2r116 protein_coding protein_coding MGP_LPJ_T0008723.1 MGP_LPJ_G0007050.1 mouse_genomes_project 6 119878641 119880677 + D030044L04Rik lincRNA lincRNA MGP_LPJ_T0002063.1 MGP_LPJ_G0001973.1 mouse_genomes_project 6 81696686 81699354 + TEC TEC MGP_LPJ_T0079653.1 MGP_LPJ_G0031118.1 mouse_genomes_project 6 124670051 124725352 + MGP_LPJ_P0079653 Gm7298 protein_coding protein_coding MGP_LPJ_T0100910.1 MGP_LPJ_G0039173.1 mouse_genomes_project 6 95176611 95176741 + Gm22312 snoRNA snoRNA MGP_LPJ_T0015315.1 MGP_LPJ_G0013406.1 mouse_genomes_project 6 57911875 57912244 + processed_pseudogene processed_pseudogene MGP_LPJ_T0078818.1 MGP_LPJ_G0030971.1 mouse_genomes_project 6 98947745 98990703 - MGP_LPJ_P0078818 Eogt protein_coding protein_coding MGP_LPJ_T0078819.1 MGP_LPJ_G0030971.1 mouse_genomes_project 6 98949691 98990404 - Eogt protein_coding processed_transcript MGP_LPJ_T0078820.1 MGP_LPJ_G0030971.1 mouse_genomes_project 6 98949720 98990448 - MGP_LPJ_P0078820 Eogt protein_coding protein_coding MGP_LPJ_T0078821.1 MGP_LPJ_G0030971.1 mouse_genomes_project 6 98949905 98957305 - Eogt protein_coding processed_transcript MGP_LPJ_T0078822.1 MGP_LPJ_G0030971.1 mouse_genomes_project 6 98977205 98989305 - MGP_LPJ_P0078822 Eogt protein_coding protein_coding MGP_LPJ_T0078823.1 MGP_LPJ_G0030971.1 mouse_genomes_project 6 98985500 98989315 - MGP_LPJ_P0078823 Eogt protein_coding protein_coding MGP_LPJ_T0078824.1 MGP_LPJ_G0030971.1 mouse_genomes_project 6 98986790 98990381 - MGP_LPJ_P0078824 Eogt protein_coding protein_coding MGP_LPJ_T0078825.1 MGP_LPJ_G0030971.1 mouse_genomes_project 6 98986844 98990445 - MGP_LPJ_P0078825 Eogt protein_coding protein_coding MGP_LPJ_T0080374.1 MGP_LPJ_G0031317.1 mouse_genomes_project 6 139423079 139436618 + MGP_LPJ_P0080374 Ddx47 protein_coding protein_coding MGP_LPJ_T0080375.1 MGP_LPJ_G0031317.1 mouse_genomes_project 6 139423089 139431874 + MGP_LPJ_P0080375 Ddx47 protein_coding protein_coding MGP_LPJ_T0080376.1 MGP_LPJ_G0031317.1 mouse_genomes_project 6 139423091 139431838 + MGP_LPJ_P0080376 Ddx47 protein_coding protein_coding MGP_LPJ_T0080377.1 MGP_LPJ_G0031317.1 mouse_genomes_project 6 139423093 139429464 + Ddx47 protein_coding retained_intron MGP_LPJ_T0080378.1 MGP_LPJ_G0031317.1 mouse_genomes_project 6 139423099 139436614 + Ddx47 protein_coding retained_intron MGP_LPJ_T0080379.1 MGP_LPJ_G0031317.1 mouse_genomes_project 6 139423100 139430953 + MGP_LPJ_P0080379 Ddx47 protein_coding protein_coding MGP_LPJ_T0080380.1 MGP_LPJ_G0031317.1 mouse_genomes_project 6 139423102 139428461 + Ddx47 protein_coding retained_intron MGP_LPJ_T0080381.1 MGP_LPJ_G0031317.1 mouse_genomes_project 6 139423111 139434396 + MGP_LPJ_P0080381 Ddx47 protein_coding protein_coding MGP_LPJ_T0080382.1 MGP_LPJ_G0031317.1 mouse_genomes_project 6 139423120 139434419 + MGP_LPJ_P0080382 Ddx47 protein_coding protein_coding MGP_LPJ_T0080383.1 MGP_LPJ_G0031317.1 mouse_genomes_project 6 139428185 139431903 + Ddx47 protein_coding processed_transcript MGP_LPJ_T0080384.1 MGP_LPJ_G0031317.1 mouse_genomes_project 6 139428656 139431371 + Ddx47 protein_coding retained_intron MGP_LPJ_T0080385.1 MGP_LPJ_G0031317.1 mouse_genomes_project 6 139431836 139436614 + MGP_LPJ_P0080385 Ddx47 protein_coding protein_coding MGP_LPJ_T0079723.1 MGP_LPJ_G0031136.1 mouse_genomes_project 6 126297896 126328332 + MGP_LPJ_P0079723 Clec4a4 protein_coding protein_coding MGP_LPJ_T0015462.1 MGP_LPJ_G0013553.1 mouse_genomes_project 6 100719023 100719303 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002087.1 MGP_LPJ_G0001997.1 mouse_genomes_project 6 88905182 88907818 + TEC TEC MGP_LPJ_T0001982.1 MGP_LPJ_G0001892.1 mouse_genomes_project 6 38548797 38552290 + TEC TEC MGP_LPJ_T0002132.1 MGP_LPJ_G0002042.1 mouse_genomes_project 6 103418688 103421373 - TEC TEC MGP_LPJ_T0015535.1 MGP_LPJ_G0013626.1 mouse_genomes_project 6 125523774 125524154 + processed_pseudogene processed_pseudogene MGP_LPJ_T0076351.1 MGP_LPJ_G0030411.1 mouse_genomes_project 6 26095093 26118809 - MGP_LPJ_P0076351 Zfp800 protein_coding protein_coding MGP_LPJ_T0076352.1 MGP_LPJ_G0030411.1 mouse_genomes_project 6 26095406 26258268 - MGP_LPJ_P0076352 Zfp800 protein_coding protein_coding MGP_LPJ_T0076353.1 MGP_LPJ_G0030411.1 mouse_genomes_project 6 26097434 26118821 - MGP_LPJ_P0076353 Zfp800 protein_coding protein_coding MGP_LPJ_T0076354.1 MGP_LPJ_G0030411.1 mouse_genomes_project 6 26099469 26118812 - MGP_LPJ_P0076354 Zfp800 protein_coding protein_coding MGP_LPJ_T0076355.1 MGP_LPJ_G0030411.1 mouse_genomes_project 6 26100396 26118830 - MGP_LPJ_P0076355 Zfp800 protein_coding protein_coding MGP_LPJ_T0077110.1 MGP_LPJ_G0030586.1 mouse_genomes_project 6 46601475 46618736 - MGP_LPJ_P0077110 Pdia4 protein_coding protein_coding MGP_LPJ_T0077111.1 MGP_LPJ_G0030586.1 mouse_genomes_project 6 46612347 46618670 - Pdia4 protein_coding processed_transcript MGP_LPJ_T0008638.1 MGP_LPJ_G0006982.1 mouse_genomes_project 6 71072880 71094255 + Gm43291 lincRNA lincRNA MGP_LPJ_T0102255.1 MGP_LPJ_G0040292.1 mouse_genomes_project 6 119341893 119343726 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0102260.1 MGP_LPJ_G0040297.1 mouse_genomes_project 6 127616554 127617458 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008683.1 MGP_LPJ_G0007018.1 mouse_genomes_project 6 90681218 90686297 - Gm839 lincRNA lincRNA MGP_LPJ_T0002753.1 MGP_LPJ_G0002625.1 mouse_genomes_project 6 39553061 39553337 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0000159.1 MGP_LPJ_G0000118.1 mouse_genomes_project 6 67829559 67830033 + MGP_LPJ_P0000159 Igkv9-129 IG_V_gene IG_V_gene MGP_LPJ_T0000160.1 MGP_LPJ_G0000118.1 mouse_genomes_project 6 67829559 67830033 + MGP_LPJ_P0000160 Igkv9-129 IG_V_gene IG_V_gene MGP_LPJ_T0076946.1 MGP_LPJ_G0030530.1 mouse_genomes_project 6 39802084 39807375 - MGP_LPJ_P0076946 protein_coding protein_coding MGP_LPJ_T0015349.1 MGP_LPJ_G0013440.1 mouse_genomes_project 6 65842376 65843952 - processed_pseudogene processed_pseudogene MGP_LPJ_T0078981.1 MGP_LPJ_G0031001.1 mouse_genomes_project 6 111127361 111170860 + MGP_LPJ_P0078981 Arl8b protein_coding protein_coding MGP_LPJ_T0005122.1 MGP_LPJ_G0004369.1 mouse_genomes_project 6 132797316 132823525 - Gm15987 antisense antisense MGP_LPJ_T0018180.1 MGP_LPJ_G0015541.1 mouse_genomes_project 6 13727301 13743410 - Gm43996 processed_transcript lincRNA MGP_LPJ_T0018181.1 MGP_LPJ_G0015541.1 mouse_genomes_project 6 13741698 13743364 - Gm43996 processed_transcript retained_intron MGP_LPJ_T0005156.1 MGP_LPJ_G0004399.1 mouse_genomes_project 6 153244276 153251677 - Far2os1 antisense antisense MGP_LPJ_T0008502.1 MGP_LPJ_G0006892.1 mouse_genomes_project 6 1569223 1569603 - Gm20714 lincRNA lincRNA MGP_LPJ_T0008503.1 MGP_LPJ_G0006892.1 mouse_genomes_project 6 1569223 1577931 - Gm20714 lincRNA lincRNA MGP_LPJ_T0008504.1 MGP_LPJ_G0006892.1 mouse_genomes_project 6 1569225 1575063 - Gm20714 lincRNA lincRNA MGP_LPJ_T0080490.1 MGP_LPJ_G0031342.1 mouse_genomes_project 6 142419539 142436781 + MGP_LPJ_P0080490 Strap protein_coding protein_coding MGP_LPJ_T0080491.1 MGP_LPJ_G0031342.1 mouse_genomes_project 6 142429979 142433586 + Strap protein_coding processed_transcript MGP_LPJ_T0080492.1 MGP_LPJ_G0031342.1 mouse_genomes_project 6 142434057 142435525 + Strap protein_coding retained_intron MGP_LPJ_T0078997.1 MGP_LPJ_G0031007.1 mouse_genomes_project 6 114976589 114995089 - MGP_LPJ_P0078997 Oxtr protein_coding protein_coding MGP_LPJ_T0078998.1 MGP_LPJ_G0031007.1 mouse_genomes_project 6 114976593 114993540 - MGP_LPJ_P0078998 Oxtr protein_coding protein_coding MGP_LPJ_T0010834.1 MGP_LPJ_G0008952.1 mouse_genomes_project 6 131419275 131419335 - Mir7233 miRNA miRNA MGP_LPJ_T0000347.1 MGP_LPJ_G0000285.1 mouse_genomes_project 6 69556030 69556526 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0000200.1 MGP_LPJ_G0000149.1 mouse_genomes_project 6 69637203 69637708 - MGP_LPJ_P0000200 Igkv4-68 IG_V_gene IG_V_gene MGP_LPJ_T0080450.1 MGP_LPJ_G0031335.1 mouse_genomes_project 6 141483938 141487351 - MGP_LPJ_P0080450 Mgp protein_coding protein_coding MGP_LPJ_T0080451.1 MGP_LPJ_G0031335.1 mouse_genomes_project 6 141485214 141487309 - Mgp protein_coding retained_intron MGP_LPJ_T0080188.1 MGP_LPJ_G0031238.1 mouse_genomes_project 6 132890819 132908054 + MGP_LPJ_P0080188 Klrb1f protein_coding nonsense_mediated_decay MGP_LPJ_T0080189.1 MGP_LPJ_G0031238.1 mouse_genomes_project 6 132890819 132908054 + MGP_LPJ_P0080189 Klrb1f protein_coding protein_coding MGP_LPJ_T0080190.1 MGP_LPJ_G0031238.1 mouse_genomes_project 6 132890838 132907299 + MGP_LPJ_P0080190 Klrb1f protein_coding nonsense_mediated_decay MGP_LPJ_T0080191.1 MGP_LPJ_G0031238.1 mouse_genomes_project 6 132890843 132902943 + Klrb1f protein_coding retained_intron MGP_LPJ_T0080192.1 MGP_LPJ_G0031238.1 mouse_genomes_project 6 132890845 132904016 + MGP_LPJ_P0080192 Klrb1f protein_coding protein_coding MGP_LPJ_T0080193.1 MGP_LPJ_G0031238.1 mouse_genomes_project 6 132894236 132904022 + Klrb1f protein_coding processed_transcript MGP_LPJ_T0077112.1 MGP_LPJ_G0030587.1 mouse_genomes_project 6 46625764 46637351 - MGP_LPJ_P0077112 Zfp786 protein_coding protein_coding MGP_LPJ_T0077113.1 MGP_LPJ_G0030587.1 mouse_genomes_project 6 46628156 46637052 - Zfp786 protein_coding processed_transcript MGP_LPJ_T0077114.1 MGP_LPJ_G0030587.1 mouse_genomes_project 6 46634652 46636988 - Zfp786 protein_coding retained_intron MGP_LPJ_T0080196.1 MGP_LPJ_G0031241.1 mouse_genomes_project 6 133139672 133147849 - MGP_LPJ_P0080196 Cd69 protein_coding protein_coding MGP_LPJ_T0080197.1 MGP_LPJ_G0031241.1 mouse_genomes_project 6 133140606 133147779 - MGP_LPJ_P0080197 Cd69 protein_coding protein_coding MGP_LPJ_T0080198.1 MGP_LPJ_G0031241.1 mouse_genomes_project 6 133141798 133147782 - Cd69 protein_coding retained_intron MGP_LPJ_T0080199.1 MGP_LPJ_G0031241.1 mouse_genomes_project 6 133142749 133147782 - Cd69 protein_coding retained_intron MGP_LPJ_T0080200.1 MGP_LPJ_G0031241.1 mouse_genomes_project 6 133143577 133147782 - Cd69 protein_coding retained_intron MGP_LPJ_T0015352.1 MGP_LPJ_G0013443.1 mouse_genomes_project 6 66250558 66250724 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015587.1 MGP_LPJ_G0013678.1 mouse_genomes_project 6 136657658 136657875 - processed_pseudogene processed_pseudogene MGP_LPJ_T0079126.1 MGP_LPJ_G0031026.1 mouse_genomes_project 6 116040064 116050119 + MGP_LPJ_P0079126 Creld1 protein_coding protein_coding MGP_LPJ_T0079127.1 MGP_LPJ_G0031026.1 mouse_genomes_project 6 116040190 116046007 + Creld1 protein_coding retained_intron MGP_LPJ_T0079128.1 MGP_LPJ_G0031026.1 mouse_genomes_project 6 116040622 116045176 + Creld1 protein_coding retained_intron MGP_LPJ_T0079129.1 MGP_LPJ_G0031026.1 mouse_genomes_project 6 116044261 116046493 + Creld1 protein_coding retained_intron MGP_LPJ_T0079130.1 MGP_LPJ_G0031026.1 mouse_genomes_project 6 116048797 116050124 + Creld1 protein_coding retained_intron MGP_LPJ_T0079131.1 MGP_LPJ_G0031026.1 mouse_genomes_project 6 116048799 116050116 + Creld1 protein_coding retained_intron MGP_LPJ_T0004990.1 MGP_LPJ_G0004279.1 mouse_genomes_project 6 54631258 54642836 - Gm44073 antisense antisense MGP_LPJ_T0005045.1 MGP_LPJ_G0004313.1 mouse_genomes_project 6 89298540 89304157 - Gm26636 antisense antisense MGP_LPJ_T0015221.1 MGP_LPJ_G0013312.1 mouse_genomes_project 6 17264657 17264764 + processed_pseudogene processed_pseudogene MGP_LPJ_T0078111.1 MGP_LPJ_G0030828.1 mouse_genomes_project 6 84361135 84370996 + MGP_LPJ_P0078111 Bola3 protein_coding protein_coding MGP_LPJ_T0078112.1 MGP_LPJ_G0030828.1 mouse_genomes_project 6 84361204 84370971 + MGP_LPJ_P0078112 Bola3 protein_coding protein_coding MGP_LPJ_T0078113.1 MGP_LPJ_G0030828.1 mouse_genomes_project 6 84361434 84372736 + MGP_LPJ_P0078113 Bola3 protein_coding protein_coding MGP_LPJ_T0078114.1 MGP_LPJ_G0030828.1 mouse_genomes_project 6 84361479 84362389 + Bola3 protein_coding processed_transcript MGP_LPJ_T0078115.1 MGP_LPJ_G0030828.1 mouse_genomes_project 6 84361508 84365187 + Bola3 protein_coding retained_intron MGP_LPJ_T0078116.1 MGP_LPJ_G0030828.1 mouse_genomes_project 6 84363028 84365198 + Bola3 protein_coding retained_intron MGP_LPJ_T0078117.1 MGP_LPJ_G0030828.1 mouse_genomes_project 6 84363028 84371016 + Bola3 protein_coding retained_intron MGP_LPJ_T0078118.1 MGP_LPJ_G0030828.1 mouse_genomes_project 6 84364083 84370933 + Bola3 protein_coding processed_transcript MGP_LPJ_T0078119.1 MGP_LPJ_G0030828.1 mouse_genomes_project 6 84365302 84371847 + Bola3 protein_coding processed_transcript MGP_LPJ_T0077236.1 MGP_LPJ_G0030618.1 mouse_genomes_project 6 47830480 47865720 + MGP_LPJ_P0077236 Aoc1 protein_coding protein_coding MGP_LPJ_T0077237.1 MGP_LPJ_G0030618.1 mouse_genomes_project 6 47855097 47869032 + MGP_LPJ_P0077237 Aoc1 protein_coding protein_coding MGP_LPJ_T0077238.1 MGP_LPJ_G0030618.1 mouse_genomes_project 6 47864829 47869031 + MGP_LPJ_P0077238 Aoc1 protein_coding protein_coding MGP_LPJ_T0077239.1 MGP_LPJ_G0030618.1 mouse_genomes_project 6 47864829 47869031 + MGP_LPJ_P0077239 Aoc1 protein_coding protein_coding MGP_LPJ_T0077240.1 MGP_LPJ_G0030618.1 mouse_genomes_project 6 47867198 47868495 + Aoc1 protein_coding retained_intron MGP_LPJ_T0078629.1 MGP_LPJ_G0030931.1 mouse_genomes_project 6 91764150 91768693 + MGP_LPJ_P0078629 protein_coding protein_coding MGP_LPJ_T0080651.1 MGP_LPJ_G0031375.1 mouse_genomes_project 6 147733057 147753893 - MGP_LPJ_P0080651 Sult6b2 protein_coding nonsense_mediated_decay MGP_LPJ_T0080652.1 MGP_LPJ_G0031375.1 mouse_genomes_project 6 147733633 147753857 - MGP_LPJ_P0080652 Sult6b2 protein_coding protein_coding MGP_LPJ_T0077063.1 MGP_LPJ_G0030579.1 mouse_genomes_project 6 41818883 41821453 + MGP_LPJ_P0077063 Olfr47 protein_coding protein_coding MGP_LPJ_T0008619.1 MGP_LPJ_G0006966.1 mouse_genomes_project 6 51737636 51744553 + lincRNA lincRNA MGP_LPJ_T0079896.1 MGP_LPJ_G0031176.1 mouse_genomes_project 6 128417205 128424603 + Mlf2 protein_coding retained_intron MGP_LPJ_T0079897.1 MGP_LPJ_G0031176.1 mouse_genomes_project 6 128417224 128421750 + Mlf2 protein_coding retained_intron MGP_LPJ_T0079898.1 MGP_LPJ_G0031176.1 mouse_genomes_project 6 128417224 128418508 + Mlf2 protein_coding retained_intron MGP_LPJ_T0079899.1 MGP_LPJ_G0031176.1 mouse_genomes_project 6 128417244 128421744 + MGP_LPJ_P0079899 Mlf2 protein_coding protein_coding MGP_LPJ_T0079900.1 MGP_LPJ_G0031176.1 mouse_genomes_project 6 128417251 128423510 + MGP_LPJ_P0079900 Mlf2 protein_coding protein_coding MGP_LPJ_T0079901.1 MGP_LPJ_G0031176.1 mouse_genomes_project 6 128417295 128423509 + MGP_LPJ_P0079901 Mlf2 protein_coding protein_coding MGP_LPJ_T0079902.1 MGP_LPJ_G0031176.1 mouse_genomes_project 6 128417729 128421736 + MGP_LPJ_P0079902 Mlf2 protein_coding protein_coding MGP_LPJ_T0079903.1 MGP_LPJ_G0031176.1 mouse_genomes_project 6 128418443 128422658 + Mlf2 protein_coding retained_intron MGP_LPJ_T0002180.1 MGP_LPJ_G0002089.1 mouse_genomes_project 6 133615134 133615519 - TEC TEC MGP_LPJ_T0100929.1 MGP_LPJ_G0039192.1 mouse_genomes_project 6 127561946 127562065 + Gm22916 snoRNA snoRNA MGP_LPJ_T0015208.1 MGP_LPJ_G0013299.1 mouse_genomes_project 6 11140637 11140942 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002593.1 MGP_LPJ_G0002490.1 mouse_genomes_project 6 40059835 40059885 + MGP_LPJ_P0002593 Trbj2-1 TR_J_gene TR_J_gene MGP_LPJ_T0079111.1 MGP_LPJ_G0031023.1 mouse_genomes_project 6 115998270 116003931 + MGP_LPJ_P0079111 Jagn1 protein_coding protein_coding MGP_LPJ_T0079112.1 MGP_LPJ_G0031023.1 mouse_genomes_project 6 115998296 116000710 + Jagn1 protein_coding retained_intron MGP_LPJ_T0079113.1 MGP_LPJ_G0031023.1 mouse_genomes_project 6 115998311 116003911 + MGP_LPJ_P0079113 Jagn1 protein_coding protein_coding MGP_LPJ_T0005046.1 MGP_LPJ_G0004314.1 mouse_genomes_project 6 89372329 89375627 + Gm5577 antisense antisense MGP_LPJ_T0005047.1 MGP_LPJ_G0004314.1 mouse_genomes_project 6 89373129 89402016 + Gm5577 antisense antisense MGP_LPJ_T0005048.1 MGP_LPJ_G0004314.1 mouse_genomes_project 6 89373129 89375619 + Gm5577 antisense antisense MGP_LPJ_T0101381.1 MGP_LPJ_G0039572.1 mouse_genomes_project 6 65175910 65176980 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101382.1 MGP_LPJ_G0039572.1 mouse_genomes_project 6 65176030 65176748 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0002094.1 MGP_LPJ_G0002004.1 mouse_genomes_project 6 89448867 89450812 - TEC TEC MGP_LPJ_T0002108.1 MGP_LPJ_G0002018.1 mouse_genomes_project 6 92960287 92961489 + TEC TEC MGP_LPJ_T0015421.1 MGP_LPJ_G0013512.1 mouse_genomes_project 6 84888347 84889109 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008708.1 MGP_LPJ_G0007037.1 mouse_genomes_project 6 103659308 103678816 + Gm44169 lincRNA lincRNA MGP_LPJ_T0004924.1 MGP_LPJ_G0004231.1 mouse_genomes_project 6 3683055 3726473 - Dlx6os1 antisense antisense MGP_LPJ_T0004925.1 MGP_LPJ_G0004231.1 mouse_genomes_project 6 3683409 3736029 - Dlx6os1 antisense antisense MGP_LPJ_T0100896.1 MGP_LPJ_G0039159.1 mouse_genomes_project 6 67780119 67780257 - Gm22425 snoRNA snoRNA MGP_LPJ_T0015355.1 MGP_LPJ_G0013446.1 mouse_genomes_project 6 66382003 66383918 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015516.1 MGP_LPJ_G0013607.1 mouse_genomes_project 6 120226042 120226463 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004955.1 MGP_LPJ_G0004253.1 mouse_genomes_project 6 32941168 32949379 - Gm14547 antisense antisense MGP_LPJ_T0076363.1 MGP_LPJ_G0030414.1 mouse_genomes_project 6 26288658 26300213 + MGP_LPJ_P0076363 Fscn3 protein_coding protein_coding MGP_LPJ_T0076364.1 MGP_LPJ_G0030414.1 mouse_genomes_project 6 26295895 26297493 + Fscn3 protein_coding processed_transcript MGP_LPJ_T0018217.1 MGP_LPJ_G0015549.1 mouse_genomes_project 6 53536025 53545180 - Gm15527 processed_transcript retained_intron MGP_LPJ_T0018218.1 MGP_LPJ_G0015549.1 mouse_genomes_project 6 53538450 53569288 - Gm15527 processed_transcript antisense MGP_LPJ_T0018219.1 MGP_LPJ_G0015549.1 mouse_genomes_project 6 53538466 53569290 - Gm15527 processed_transcript antisense MGP_LPJ_T0008623.1 MGP_LPJ_G0006969.1 mouse_genomes_project 6 54488170 54501982 + Gm43995 lincRNA lincRNA MGP_LPJ_T0079283.1 MGP_LPJ_G0031056.1 mouse_genomes_project 6 118495415 118507843 - MGP_LPJ_P0079283 Mbd4 protein_coding protein_coding MGP_LPJ_T0079284.1 MGP_LPJ_G0031056.1 mouse_genomes_project 6 118495917 118503210 - Mbd4 protein_coding processed_transcript MGP_LPJ_T0079285.1 MGP_LPJ_G0031056.1 mouse_genomes_project 6 118497061 118507837 - MGP_LPJ_P0079285 Mbd4 protein_coding nonsense_mediated_decay MGP_LPJ_T0079286.1 MGP_LPJ_G0031056.1 mouse_genomes_project 6 118497061 118503471 - MGP_LPJ_P0079286 Mbd4 protein_coding protein_coding MGP_LPJ_T0079287.1 MGP_LPJ_G0031056.1 mouse_genomes_project 6 118502190 118507760 - MGP_LPJ_P0079287 Mbd4 protein_coding protein_coding MGP_LPJ_T0076325.1 MGP_LPJ_G0030405.1 mouse_genomes_project 6 22510629 22527097 + MGP_LPJ_P0076325 Spam1 protein_coding protein_coding MGP_LPJ_T0076326.1 MGP_LPJ_G0030405.1 mouse_genomes_project 6 22510642 22527097 + MGP_LPJ_P0076326 Spam1 protein_coding protein_coding MGP_LPJ_T0076327.1 MGP_LPJ_G0030405.1 mouse_genomes_project 6 22510656 22516394 + Spam1 protein_coding retained_intron MGP_LPJ_T0076328.1 MGP_LPJ_G0030405.1 mouse_genomes_project 6 22515167 22527097 + MGP_LPJ_P0076328 Spam1 protein_coding protein_coding MGP_LPJ_T0080298.1 MGP_LPJ_G0031286.1 mouse_genomes_project 6 136929667 136931996 - A630073D07Rik protein_coding processed_transcript MGP_LPJ_T0080299.1 MGP_LPJ_G0031286.1 mouse_genomes_project 6 136929667 136932048 - MGP_LPJ_P0080299 A630073D07Rik protein_coding protein_coding MGP_LPJ_T0076980.1 MGP_LPJ_G0030547.1 mouse_genomes_project 6 40719253 40723764 + MGP_LPJ_P0076980 Gstk1 protein_coding protein_coding MGP_LPJ_T0076981.1 MGP_LPJ_G0030547.1 mouse_genomes_project 6 40719297 40723764 + MGP_LPJ_P0076981 Gstk1 protein_coding nonsense_mediated_decay MGP_LPJ_T0076982.1 MGP_LPJ_G0030547.1 mouse_genomes_project 6 40719307 40723770 + Gstk1 protein_coding retained_intron MGP_LPJ_T0076983.1 MGP_LPJ_G0030547.1 mouse_genomes_project 6 40719341 40723642 + Gstk1 protein_coding processed_transcript MGP_LPJ_T0004999.1 MGP_LPJ_G0004288.1 mouse_genomes_project 6 72561135 72564120 - 4933431G14Rik antisense antisense MGP_LPJ_T0005000.1 MGP_LPJ_G0004288.1 mouse_genomes_project 6 72561135 72563863 - 4933431G14Rik antisense antisense MGP_LPJ_T0079953.1 MGP_LPJ_G0031183.1 mouse_genomes_project 6 128587595 128626358 + MGP_LPJ_P0079953 Chd4 protein_coding protein_coding MGP_LPJ_T0079954.1 MGP_LPJ_G0031183.1 mouse_genomes_project 6 128587595 128626364 + MGP_LPJ_P0079954 Chd4 protein_coding protein_coding MGP_LPJ_T0079955.1 MGP_LPJ_G0031183.1 mouse_genomes_project 6 128587776 128626364 + MGP_LPJ_P0079955 Chd4 protein_coding protein_coding MGP_LPJ_T0079956.1 MGP_LPJ_G0031183.1 mouse_genomes_project 6 128587791 128588990 + Chd4 protein_coding retained_intron MGP_LPJ_T0079957.1 MGP_LPJ_G0031183.1 mouse_genomes_project 6 128587811 128625768 + MGP_LPJ_P0079957 Chd4 protein_coding unknown_likely_coding MGP_LPJ_T0079958.1 MGP_LPJ_G0031183.1 mouse_genomes_project 6 128588187 128592123 + MGP_LPJ_P0079958 Chd4 protein_coding protein_coding MGP_LPJ_T0079959.1 MGP_LPJ_G0031183.1 mouse_genomes_project 6 128606216 128608809 + Chd4 protein_coding retained_intron MGP_LPJ_T0079960.1 MGP_LPJ_G0031183.1 mouse_genomes_project 6 128606244 128616428 + MGP_LPJ_P0079960 Chd4 protein_coding protein_coding MGP_LPJ_T0079961.1 MGP_LPJ_G0031183.1 mouse_genomes_project 6 128614247 128615351 + Chd4 protein_coding retained_intron MGP_LPJ_T0008676.1 MGP_LPJ_G0007014.1 mouse_genomes_project 6 89054806 89070811 - 1810020O05Rik lincRNA lincRNA MGP_LPJ_T0080247.1 MGP_LPJ_G0031255.1 mouse_genomes_project 6 133544694 133559956 - MGP_LPJ_P0080247 protein_coding protein_coding MGP_LPJ_T0079888.1 MGP_LPJ_G0031174.1 mouse_genomes_project 6 128386706 128396248 - MGP_LPJ_P0079888 Lag3 protein_coding protein_coding MGP_LPJ_T0079889.1 MGP_LPJ_G0031174.1 mouse_genomes_project 6 128386792 128395615 - MGP_LPJ_P0079889 Lag3 protein_coding unknown_likely_coding MGP_LPJ_T0079890.1 MGP_LPJ_G0031174.1 mouse_genomes_project 6 128392863 128394315 - Lag3 protein_coding processed_transcript MGP_LPJ_T0076039.1 MGP_LPJ_G0030348.1 mouse_genomes_project 6 4431599 4439594 + MGP_LPJ_P0076039 Tac1 protein_coding protein_coding MGP_LPJ_T0076040.1 MGP_LPJ_G0030348.1 mouse_genomes_project 6 4431725 4439588 + MGP_LPJ_P0076040 Tac1 protein_coding protein_coding MGP_LPJ_T0076041.1 MGP_LPJ_G0030348.1 mouse_genomes_project 6 4431747 4439312 + MGP_LPJ_P0076041 Tac1 protein_coding protein_coding MGP_LPJ_T0076042.1 MGP_LPJ_G0030348.1 mouse_genomes_project 6 4438979 4442445 + Tac1 protein_coding processed_transcript MGP_LPJ_T0076917.1 MGP_LPJ_G0030514.1 mouse_genomes_project 6 38957415 38958488 + MGP_LPJ_P0076917 Tas2r137 protein_coding protein_coding MGP_LPJ_T0015580.1 MGP_LPJ_G0013671.1 mouse_genomes_project 6 135513215 135513330 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000170.1 MGP_LPJ_G0000126.1 mouse_genomes_project 6 68248066 68248792 + MGP_LPJ_P0000170 Igkv2-112 IG_V_gene IG_V_gene MGP_LPJ_T0000171.1 MGP_LPJ_G0000126.1 mouse_genomes_project 6 68248066 68248792 + MGP_LPJ_P0000171 Igkv2-112 IG_V_gene IG_V_gene MGP_LPJ_T0015603.1 MGP_LPJ_G0013694.1 mouse_genomes_project 6 140919854 140921031 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002162.1 MGP_LPJ_G0002071.1 mouse_genomes_project 6 123829111 123831201 - TEC TEC MGP_LPJ_T0079039.1 MGP_LPJ_G0031013.1 mouse_genomes_project 6 115781530 115833808 + MGP_LPJ_P0079039 Mtmr14 protein_coding protein_coding MGP_LPJ_T0079040.1 MGP_LPJ_G0031013.1 mouse_genomes_project 6 115781538 115823210 + MGP_LPJ_P0079040 Mtmr14 protein_coding nonsense_mediated_decay MGP_LPJ_T0079041.1 MGP_LPJ_G0031013.1 mouse_genomes_project 6 115781584 115833803 + MGP_LPJ_P0079041 Mtmr14 protein_coding nonsense_mediated_decay MGP_LPJ_T0079042.1 MGP_LPJ_G0031013.1 mouse_genomes_project 6 115786988 115804793 + MGP_LPJ_P0079042 Mtmr14 protein_coding protein_coding MGP_LPJ_T0079043.1 MGP_LPJ_G0031013.1 mouse_genomes_project 6 115801878 115821925 + MGP_LPJ_P0079043 Mtmr14 protein_coding nonsense_mediated_decay MGP_LPJ_T0079044.1 MGP_LPJ_G0031013.1 mouse_genomes_project 6 115803596 115818456 + MGP_LPJ_P0079044 Mtmr14 protein_coding nonsense_mediated_decay MGP_LPJ_T0079045.1 MGP_LPJ_G0031013.1 mouse_genomes_project 6 115811020 115830351 + MGP_LPJ_P0079045 Mtmr14 protein_coding protein_coding MGP_LPJ_T0079046.1 MGP_LPJ_G0031013.1 mouse_genomes_project 6 115818389 115833335 + MGP_LPJ_P0079046 Mtmr14 protein_coding nonsense_mediated_decay MGP_LPJ_T0079047.1 MGP_LPJ_G0031013.1 mouse_genomes_project 6 115818420 115833612 + MGP_LPJ_P0079047 Mtmr14 protein_coding protein_coding MGP_LPJ_T0079048.1 MGP_LPJ_G0031013.1 mouse_genomes_project 6 115821964 115833503 + MGP_LPJ_P0079048 Mtmr14 protein_coding protein_coding MGP_LPJ_T0078906.1 MGP_LPJ_G0030986.1 mouse_genomes_project 6 102809908 102911148 + MGP_LPJ_P0078906 Gxylt2 protein_coding protein_coding MGP_LPJ_T0078907.1 MGP_LPJ_G0030986.1 mouse_genomes_project 6 102809929 102812853 + Gxylt2 protein_coding processed_transcript MGP_LPJ_T0080269.1 MGP_LPJ_G0031271.1 mouse_genomes_project 6 135526934 135535721 - MGP_LPJ_P0080269 Magohb protein_coding protein_coding MGP_LPJ_T0080270.1 MGP_LPJ_G0031271.1 mouse_genomes_project 6 135527059 135528420 - Magohb protein_coding retained_intron MGP_LPJ_T0080271.1 MGP_LPJ_G0031271.1 mouse_genomes_project 6 135527069 135535608 - MGP_LPJ_P0080271 Magohb protein_coding nonsense_mediated_decay MGP_LPJ_T0080272.1 MGP_LPJ_G0031271.1 mouse_genomes_project 6 135527151 135534753 - MGP_LPJ_P0080272 Magohb protein_coding protein_coding MGP_LPJ_T0080273.1 MGP_LPJ_G0031271.1 mouse_genomes_project 6 135527211 135532127 - Magohb protein_coding retained_intron MGP_LPJ_T0080274.1 MGP_LPJ_G0031271.1 mouse_genomes_project 6 135527247 135535628 - MGP_LPJ_P0080274 Magohb protein_coding nonsense_mediated_decay MGP_LPJ_T0080275.1 MGP_LPJ_G0031271.1 mouse_genomes_project 6 135530685 135535628 - MGP_LPJ_P0080275 Magohb protein_coding nonsense_mediated_decay MGP_LPJ_T0079438.1 MGP_LPJ_G0031085.1 mouse_genomes_project 6 121244881 121262154 - MGP_LPJ_P0079438 Zfp9 protein_coding protein_coding MGP_LPJ_T0079439.1 MGP_LPJ_G0031085.1 mouse_genomes_project 6 121249662 121251257 - Zfp9 protein_coding retained_intron MGP_LPJ_T0077782.1 MGP_LPJ_G0030763.1 mouse_genomes_project 6 72254355 72279594 + Immt protein_coding retained_intron MGP_LPJ_T0077783.1 MGP_LPJ_G0030763.1 mouse_genomes_project 6 72254356 72285511 + MGP_LPJ_P0077783 Immt protein_coding protein_coding MGP_LPJ_T0077784.1 MGP_LPJ_G0030763.1 mouse_genomes_project 6 72254386 72299984 + MGP_LPJ_P0077784 Immt protein_coding protein_coding MGP_LPJ_T0077785.1 MGP_LPJ_G0030763.1 mouse_genomes_project 6 72254389 72299988 + MGP_LPJ_P0077785 Immt protein_coding protein_coding MGP_LPJ_T0077786.1 MGP_LPJ_G0030763.1 mouse_genomes_project 6 72254394 72299977 + MGP_LPJ_P0077786 Immt protein_coding protein_coding MGP_LPJ_T0077787.1 MGP_LPJ_G0030763.1 mouse_genomes_project 6 72254408 72302112 + MGP_LPJ_P0077787 Immt protein_coding nonsense_mediated_decay MGP_LPJ_T0077788.1 MGP_LPJ_G0030763.1 mouse_genomes_project 6 72254435 72281363 + MGP_LPJ_P0077788 Immt protein_coding protein_coding MGP_LPJ_T0077789.1 MGP_LPJ_G0030763.1 mouse_genomes_project 6 72254447 72299988 + MGP_LPJ_P0077789 Immt protein_coding protein_coding MGP_LPJ_T0077790.1 MGP_LPJ_G0030763.1 mouse_genomes_project 6 72288268 72291744 + Immt protein_coding retained_intron MGP_LPJ_T0077791.1 MGP_LPJ_G0030763.1 mouse_genomes_project 6 72294755 72297805 + Immt protein_coding retained_intron MGP_LPJ_T0077792.1 MGP_LPJ_G0030763.1 mouse_genomes_project 6 72295859 72299981 + Immt protein_coding retained_intron MGP_LPJ_T0077793.1 MGP_LPJ_G0030763.1 mouse_genomes_project 6 72296137 72302115 + MGP_LPJ_P0077793 Immt protein_coding protein_coding MGP_LPJ_T0077794.1 MGP_LPJ_G0030763.1 mouse_genomes_project 6 72296223 72299259 + MGP_LPJ_P0077794 Immt protein_coding protein_coding MGP_LPJ_T0077033.1 MGP_LPJ_G0030562.1 mouse_genomes_project 6 41127311 41149872 - MGP_LPJ_P0077033 Tcaf2 protein_coding protein_coding MGP_LPJ_T0077034.1 MGP_LPJ_G0030562.1 mouse_genomes_project 6 41130705 41133736 - Tcaf2 protein_coding retained_intron MGP_LPJ_T0100938.1 MGP_LPJ_G0039201.1 mouse_genomes_project 6 148462242 148462379 - Gm23272 snoRNA snoRNA MGP_LPJ_T0001985.1 MGP_LPJ_G0001895.1 mouse_genomes_project 6 40212051 40215598 - TEC TEC MGP_LPJ_T0015431.1 MGP_LPJ_G0013522.1 mouse_genomes_project 6 87074177 87074673 + processed_pseudogene processed_pseudogene MGP_LPJ_T0078546.1 MGP_LPJ_G0030910.1 mouse_genomes_project 6 90275968 90281955 - MGP_LPJ_P0078546 Abtb1 protein_coding protein_coding MGP_LPJ_T0078547.1 MGP_LPJ_G0030910.1 mouse_genomes_project 6 90275978 90281949 - MGP_LPJ_P0078547 Abtb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078548.1 MGP_LPJ_G0030910.1 mouse_genomes_project 6 90276202 90282039 - MGP_LPJ_P0078548 Abtb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078549.1 MGP_LPJ_G0030910.1 mouse_genomes_project 6 90276332 90278770 - Abtb1 protein_coding retained_intron MGP_LPJ_T0078550.1 MGP_LPJ_G0030910.1 mouse_genomes_project 6 90276477 90278921 - MGP_LPJ_P0078550 Abtb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078551.1 MGP_LPJ_G0030910.1 mouse_genomes_project 6 90276739 90279135 - MGP_LPJ_P0078551 Abtb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078552.1 MGP_LPJ_G0030910.1 mouse_genomes_project 6 90278169 90279210 - MGP_LPJ_P0078552 Abtb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078553.1 MGP_LPJ_G0030910.1 mouse_genomes_project 6 90278508 90281921 - MGP_LPJ_P0078553 Abtb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078554.1 MGP_LPJ_G0030910.1 mouse_genomes_project 6 90278711 90279644 - Abtb1 protein_coding retained_intron MGP_LPJ_T0078555.1 MGP_LPJ_G0030910.1 mouse_genomes_project 6 90278899 90281937 - MGP_LPJ_P0078555 Abtb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078556.1 MGP_LPJ_G0030910.1 mouse_genomes_project 6 90279072 90281885 - Abtb1 protein_coding retained_intron MGP_LPJ_T0078557.1 MGP_LPJ_G0030910.1 mouse_genomes_project 6 90279719 90281990 - MGP_LPJ_P0078557 Abtb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0079259.1 MGP_LPJ_G0031050.1 mouse_genomes_project 6 118248080 118268762 + MGP_LPJ_P0079259 Mkrn2 protein_coding protein_coding MGP_LPJ_T0079260.1 MGP_LPJ_G0031050.1 mouse_genomes_project 6 118248139 118259552 + Mkrn2 protein_coding processed_transcript MGP_LPJ_T0079261.1 MGP_LPJ_G0031050.1 mouse_genomes_project 6 118257471 118258537 + Mkrn2 protein_coding retained_intron MGP_LPJ_T0015233.1 MGP_LPJ_G0013324.1 mouse_genomes_project 6 22787233 22788029 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002155.1 MGP_LPJ_G0002065.1 mouse_genomes_project 6 119065272 119066217 + TEC TEC MGP_LPJ_T0015368.1 MGP_LPJ_G0013459.1 mouse_genomes_project 6 67708595 67708766 - processed_pseudogene processed_pseudogene MGP_LPJ_T0078470.1 MGP_LPJ_G0030897.1 mouse_genomes_project 6 89230428 89238925 - MGP_LPJ_P0078470 Cnbp protein_coding protein_coding MGP_LPJ_T0078471.1 MGP_LPJ_G0030897.1 mouse_genomes_project 6 89230428 89238925 - MGP_LPJ_P0078471 Cnbp protein_coding protein_coding MGP_LPJ_T0078472.1 MGP_LPJ_G0030897.1 mouse_genomes_project 6 89230895 89238899 - MGP_LPJ_P0078472 Cnbp protein_coding protein_coding MGP_LPJ_T0078473.1 MGP_LPJ_G0030897.1 mouse_genomes_project 6 89230895 89238849 - MGP_LPJ_P0078473 Cnbp protein_coding protein_coding MGP_LPJ_T0078474.1 MGP_LPJ_G0030897.1 mouse_genomes_project 6 89231700 89238879 - MGP_LPJ_P0078474 Cnbp protein_coding protein_coding MGP_LPJ_T0078475.1 MGP_LPJ_G0030897.1 mouse_genomes_project 6 89231732 89238846 - Cnbp protein_coding retained_intron MGP_LPJ_T0078476.1 MGP_LPJ_G0030897.1 mouse_genomes_project 6 89231752 89238841 - Cnbp protein_coding retained_intron MGP_LPJ_T0078477.1 MGP_LPJ_G0030897.1 mouse_genomes_project 6 89231813 89238878 - Cnbp protein_coding retained_intron MGP_LPJ_T0078478.1 MGP_LPJ_G0030897.1 mouse_genomes_project 6 89233343 89234131 - Cnbp protein_coding retained_intron MGP_LPJ_T0077147.1 MGP_LPJ_G0030596.1 mouse_genomes_project 6 47340797 47357130 - MGP_LPJ_P0077147 Zfp467 protein_coding protein_coding MGP_LPJ_T0077148.1 MGP_LPJ_G0030596.1 mouse_genomes_project 6 47340797 47359003 - MGP_LPJ_P0077148 Zfp467 protein_coding protein_coding MGP_LPJ_T0077149.1 MGP_LPJ_G0030596.1 mouse_genomes_project 6 47340797 47359106 - MGP_LPJ_P0077149 Zfp467 protein_coding protein_coding MGP_LPJ_T0077150.1 MGP_LPJ_G0030596.1 mouse_genomes_project 6 47347250 47358912 - MGP_LPJ_P0077150 Zfp467 protein_coding protein_coding MGP_LPJ_T0077151.1 MGP_LPJ_G0030596.1 mouse_genomes_project 6 47351032 47358757 - MGP_LPJ_P0077151 Zfp467 protein_coding protein_coding MGP_LPJ_T0077152.1 MGP_LPJ_G0030596.1 mouse_genomes_project 6 47352498 47358897 - MGP_LPJ_P0077152 Zfp467 protein_coding nonsense_mediated_decay MGP_LPJ_T0077153.1 MGP_LPJ_G0030596.1 mouse_genomes_project 6 47355861 47359033 - Zfp467 protein_coding retained_intron MGP_LPJ_T0011656.1 MGP_LPJ_G0009774.1 mouse_genomes_project 6 51382197 51382299 + Gm27868 misc_RNA misc_RNA MGP_LPJ_T0015512.1 MGP_LPJ_G0013603.1 mouse_genomes_project 6 119330132 119335829 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102234.1 MGP_LPJ_G0040271.1 mouse_genomes_project 6 57773872 57774798 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0001937.1 MGP_LPJ_G0001847.1 mouse_genomes_project 6 1343990 1346810 - TEC TEC MGP_LPJ_T0077347.1 MGP_LPJ_G0030644.1 mouse_genomes_project 6 51389236 51433000 - MGP_LPJ_P0077347 Hoxa3 protein_coding protein_coding MGP_LPJ_T0077348.1 MGP_LPJ_G0030644.1 mouse_genomes_project 6 51392773 51403888 - MGP_LPJ_P0077348 Hoxa3 protein_coding protein_coding MGP_LPJ_T0077350.1 MGP_LPJ_G0030644.1 mouse_genomes_project 6 51400588 51404907 - Hoxa3 protein_coding processed_transcript MGP_LPJ_T0077352.1 MGP_LPJ_G0030644.1 mouse_genomes_project 6 51419038 51433221 - Hoxa3 protein_coding retained_intron MGP_LPJ_T0079443.1 MGP_LPJ_G0031087.1 mouse_genomes_project 6 121366557 121997900 - MGP_LPJ_P0079443 Cacna1c protein_coding protein_coding MGP_LPJ_T0079444.1 MGP_LPJ_G0031087.1 mouse_genomes_project 6 121372940 121376073 - Cacna1c protein_coding processed_transcript MGP_LPJ_T0079445.1 MGP_LPJ_G0031087.1 mouse_genomes_project 6 121372955 121542168 - Cacna1c protein_coding processed_transcript MGP_LPJ_T0079446.1 MGP_LPJ_G0031087.1 mouse_genomes_project 6 121373100 121905978 - MGP_LPJ_P0079446 Cacna1c protein_coding protein_coding MGP_LPJ_T0079447.1 MGP_LPJ_G0031087.1 mouse_genomes_project 6 121373579 121905978 - MGP_LPJ_P0079447 Cacna1c protein_coding protein_coding MGP_LPJ_T0079448.1 MGP_LPJ_G0031087.1 mouse_genomes_project 6 121373579 121906025 - MGP_LPJ_P0079448 Cacna1c protein_coding protein_coding MGP_LPJ_T0079449.1 MGP_LPJ_G0031087.1 mouse_genomes_project 6 121373719 121998087 - MGP_LPJ_P0079449 Cacna1c protein_coding protein_coding MGP_LPJ_T0079450.1 MGP_LPJ_G0031087.1 mouse_genomes_project 6 121374283 121906347 - MGP_LPJ_P0079450 Cacna1c protein_coding protein_coding MGP_LPJ_T0079451.1 MGP_LPJ_G0031087.1 mouse_genomes_project 6 121374283 121998056 - MGP_LPJ_P0079451 Cacna1c protein_coding protein_coding MGP_LPJ_T0079452.1 MGP_LPJ_G0031087.1 mouse_genomes_project 6 121374430 121905764 - MGP_LPJ_P0079452 Cacna1c protein_coding protein_coding MGP_LPJ_T0079453.1 MGP_LPJ_G0031087.1 mouse_genomes_project 6 121374430 121905764 - MGP_LPJ_P0079453 Cacna1c protein_coding protein_coding MGP_LPJ_T0079454.1 MGP_LPJ_G0031087.1 mouse_genomes_project 6 121374430 121905764 - MGP_LPJ_P0079454 Cacna1c protein_coding protein_coding MGP_LPJ_T0079455.1 MGP_LPJ_G0031087.1 mouse_genomes_project 6 121374430 121905764 - MGP_LPJ_P0079455 Cacna1c protein_coding protein_coding MGP_LPJ_T0079456.1 MGP_LPJ_G0031087.1 mouse_genomes_project 6 121374430 121905764 - MGP_LPJ_P0079456 Cacna1c protein_coding protein_coding MGP_LPJ_T0079457.1 MGP_LPJ_G0031087.1 mouse_genomes_project 6 121374430 121905764 - MGP_LPJ_P0079457 Cacna1c protein_coding protein_coding MGP_LPJ_T0079458.1 MGP_LPJ_G0031087.1 mouse_genomes_project 6 121374436 121876347 - MGP_LPJ_P0079458 Cacna1c protein_coding protein_coding MGP_LPJ_T0079459.1 MGP_LPJ_G0031087.1 mouse_genomes_project 6 121374529 121905764 - MGP_LPJ_P0079459 Cacna1c protein_coding protein_coding MGP_LPJ_T0079460.1 MGP_LPJ_G0031087.1 mouse_genomes_project 6 121374529 121997900 - MGP_LPJ_P0079460 Cacna1c protein_coding protein_coding MGP_LPJ_T0079461.1 MGP_LPJ_G0031087.1 mouse_genomes_project 6 121374529 121905764 - MGP_LPJ_P0079461 Cacna1c protein_coding protein_coding MGP_LPJ_T0079462.1 MGP_LPJ_G0031087.1 mouse_genomes_project 6 121396220 121409939 - Cacna1c protein_coding processed_transcript MGP_LPJ_T0079463.1 MGP_LPJ_G0031087.1 mouse_genomes_project 6 121486319 121491295 - Cacna1c protein_coding retained_intron MGP_LPJ_T0079464.1 MGP_LPJ_G0031087.1 mouse_genomes_project 6 121739358 121998078 - Cacna1c protein_coding processed_transcript MGP_LPJ_T0011672.1 MGP_LPJ_G0009790.1 mouse_genomes_project 6 84740957 84741151 + Gm27893 misc_RNA misc_RNA MGP_LPJ_T0079257.1 MGP_LPJ_G0031049.1 mouse_genomes_project 6 118229820 118238547 - MGP_LPJ_P0079257 Mkrn2os protein_coding nonsense_mediated_decay MGP_LPJ_T0079258.1 MGP_LPJ_G0031049.1 mouse_genomes_project 6 118231398 118238574 - MGP_LPJ_P0079258 Mkrn2os protein_coding protein_coding MGP_LPJ_T0008501.1 MGP_LPJ_G0006891.1 mouse_genomes_project 6 763946 779492 - Gm43986 lincRNA lincRNA MGP_LPJ_T0078635.1 MGP_LPJ_G0030935.1 mouse_genomes_project 6 91879126 91894716 + MGP_LPJ_P0078635 Zxdc protein_coding protein_coding MGP_LPJ_T0078636.1 MGP_LPJ_G0030935.1 mouse_genomes_project 6 91879128 91914327 + MGP_LPJ_P0078636 Zxdc protein_coding protein_coding MGP_LPJ_T0078637.1 MGP_LPJ_G0030935.1 mouse_genomes_project 6 91879242 91893847 + MGP_LPJ_P0078637 Zxdc protein_coding protein_coding MGP_LPJ_T0078638.1 MGP_LPJ_G0030935.1 mouse_genomes_project 6 91879247 91892735 + MGP_LPJ_P0078638 Zxdc protein_coding protein_coding MGP_LPJ_T0078639.1 MGP_LPJ_G0030935.1 mouse_genomes_project 6 91879252 91884186 + Zxdc protein_coding retained_intron MGP_LPJ_T0015607.1 MGP_LPJ_G0013698.1 mouse_genomes_project 6 143606891 143607495 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002068.1 MGP_LPJ_G0001978.1 mouse_genomes_project 6 84326042 84328842 - TEC TEC MGP_LPJ_T0100899.1 MGP_LPJ_G0039162.1 mouse_genomes_project 6 68269157 68269302 - Gm25436 snoRNA snoRNA MGP_LPJ_T0076091.1 MGP_LPJ_G0030360.1 mouse_genomes_project 6 8877082 8902688 + MGP_LPJ_P0076091 Phf14 protein_coding protein_coding MGP_LPJ_T0076092.1 MGP_LPJ_G0030360.1 mouse_genomes_project 6 8877157 8929654 + MGP_LPJ_P0076092 Phf14 protein_coding nonsense_mediated_decay MGP_LPJ_T0076093.1 MGP_LPJ_G0030360.1 mouse_genomes_project 6 8895158 8974934 + MGP_LPJ_P0076093 Phf14 protein_coding protein_coding MGP_LPJ_T0076094.1 MGP_LPJ_G0030360.1 mouse_genomes_project 6 8895192 8975002 + MGP_LPJ_P0076094 Phf14 protein_coding protein_coding MGP_LPJ_T0076095.1 MGP_LPJ_G0030360.1 mouse_genomes_project 6 8895193 9066579 + MGP_LPJ_P0076095 Phf14 protein_coding protein_coding MGP_LPJ_T0076096.1 MGP_LPJ_G0030360.1 mouse_genomes_project 6 8896060 8952611 + MGP_LPJ_P0076096 Phf14 protein_coding protein_coding MGP_LPJ_T0076097.1 MGP_LPJ_G0030360.1 mouse_genomes_project 6 8902709 9023822 + MGP_LPJ_P0076097 Phf14 protein_coding unknown_likely_coding MGP_LPJ_T0076098.1 MGP_LPJ_G0030360.1 mouse_genomes_project 6 8953216 8954808 + Phf14 protein_coding retained_intron MGP_LPJ_T0076099.1 MGP_LPJ_G0030360.1 mouse_genomes_project 6 8957794 8962232 + Phf14 protein_coding retained_intron MGP_LPJ_T0076100.1 MGP_LPJ_G0030360.1 mouse_genomes_project 6 8973740 9066474 + MGP_LPJ_P0076100 Phf14 protein_coding nonsense_mediated_decay MGP_LPJ_T0076101.1 MGP_LPJ_G0030360.1 mouse_genomes_project 6 9020590 9026492 + Phf14 protein_coding retained_intron MGP_LPJ_T0078455.1 MGP_LPJ_G0030895.1 mouse_genomes_project 6 89170936 89222239 - MGP_LPJ_P0078455 Gm45140 protein_coding nonsense_mediated_decay MGP_LPJ_T0078459.1 MGP_LPJ_G0030895.1 mouse_genomes_project 6 89174521 89208232 - MGP_LPJ_P0078459 Gm45140 protein_coding protein_coding MGP_LPJ_T0080780.1 MGP_LPJ_G0031393.1 mouse_genomes_project 6 151720679 151755182 - MGP_LPJ_P0080780 Tm7sf3 protein_coding protein_coding MGP_LPJ_T0080781.1 MGP_LPJ_G0031393.1 mouse_genomes_project 6 151731085 151755083 - MGP_LPJ_P0080781 Tm7sf3 protein_coding nonsense_mediated_decay MGP_LPJ_T0080782.1 MGP_LPJ_G0031393.1 mouse_genomes_project 6 151741019 151763278 - Tm7sf3 protein_coding processed_transcript MGP_LPJ_T0080783.1 MGP_LPJ_G0031393.1 mouse_genomes_project 6 151743030 151763288 - Tm7sf3 protein_coding processed_transcript MGP_LPJ_T0102224.1 MGP_LPJ_G0040261.1 mouse_genomes_project 6 41756943 41757469 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0099659.1 MGP_LPJ_G0037922.1 mouse_genomes_project 6 82540798 82540957 + Gm26264 snRNA snRNA MGP_LPJ_T0004956.1 MGP_LPJ_G0004254.1 mouse_genomes_project 6 35241260 35287729 + 1700111E14Rik antisense antisense MGP_LPJ_T0080600.1 MGP_LPJ_G0031363.1 mouse_genomes_project 6 147011038 147101509 - MGP_LPJ_P0080600 Slco1a6 protein_coding protein_coding MGP_LPJ_T0080601.1 MGP_LPJ_G0031363.1 mouse_genomes_project 6 147040794 147101505 - Slco1a6 protein_coding retained_intron MGP_LPJ_T0080602.1 MGP_LPJ_G0031363.1 mouse_genomes_project 6 147085526 147125880 - MGP_LPJ_P0080602 Slco1a6 protein_coding protein_coding MGP_LPJ_T0000052.1 MGP_LPJ_G0000042.1 mouse_genomes_project 6 71077354 71077392 + MGP_LPJ_P0000052 Igkj4 IG_J_gene IG_J_gene MGP_LPJ_T0015574.1 MGP_LPJ_G0013665.1 mouse_genomes_project 6 134425017 134425356 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002018.1 MGP_LPJ_G0001928.1 mouse_genomes_project 6 54008006 54008418 + TEC TEC MGP_LPJ_T0002023.1 MGP_LPJ_G0001933.1 mouse_genomes_project 6 57137931 57140757 - TEC TEC MGP_LPJ_T0015503.1 MGP_LPJ_G0013594.1 mouse_genomes_project 6 116640154 116640206 + processed_pseudogene processed_pseudogene MGP_LPJ_T0077024.1 MGP_LPJ_G0030556.1 mouse_genomes_project 6 40918437 40919367 + MGP_LPJ_P0077024 Tas2r126 protein_coding protein_coding MGP_LPJ_T0015529.1 MGP_LPJ_G0013620.1 mouse_genomes_project 6 124564885 124565635 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101587.1 MGP_LPJ_G0039673.1 mouse_genomes_project 6 132962182 132968991 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0100900.1 MGP_LPJ_G0039163.1 mouse_genomes_project 6 68559729 68559862 + Gm25833 snoRNA snoRNA MGP_LPJ_T0076857.1 MGP_LPJ_G0030501.1 mouse_genomes_project 6 37786649 37795761 + MGP_LPJ_P0076857 Rab19 protein_coding protein_coding MGP_LPJ_T0008716.1 MGP_LPJ_G0007043.1 mouse_genomes_project 6 109959806 109964555 + 4933431M02Rik lincRNA lincRNA MGP_LPJ_T0002038.1 MGP_LPJ_G0001948.1 mouse_genomes_project 6 72901052 72902612 + TEC TEC MGP_LPJ_T0080312.1 MGP_LPJ_G0031299.1 mouse_genomes_project 6 137203353 137204355 - MGP_LPJ_P0080312 Tas2r110 protein_coding protein_coding MGP_LPJ_T0005654.1 MGP_LPJ_G0004761.1 mouse_genomes_project 6 117754228 117761417 - Gm17733 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_LPJ_T0077754.1 MGP_LPJ_G0030758.1 mouse_genomes_project 6 71902396 71920774 + MGP_LPJ_P0077754 Rnf103 protein_coding protein_coding MGP_LPJ_T0077755.1 MGP_LPJ_G0030758.1 mouse_genomes_project 6 71902412 71920774 + MGP_LPJ_P0077755 Rnf103 protein_coding protein_coding MGP_LPJ_T0077756.1 MGP_LPJ_G0030758.1 mouse_genomes_project 6 71902505 71920656 + MGP_LPJ_P0077756 Rnf103 protein_coding protein_coding MGP_LPJ_T0077757.1 MGP_LPJ_G0030758.1 mouse_genomes_project 6 71912380 71917049 + Rnf103 protein_coding retained_intron MGP_LPJ_T0100886.1 MGP_LPJ_G0039149.1 mouse_genomes_project 6 49612814 49612945 - Gm26289 snoRNA snoRNA MGP_LPJ_T0077547.1 MGP_LPJ_G0030697.1 mouse_genomes_project 6 56723973 56724873 + MGP_LPJ_P0077547 Vmn1r15 protein_coding protein_coding MGP_LPJ_T0077494.1 MGP_LPJ_G0030679.1 mouse_genomes_project 6 55195615 55342603 + MGP_LPJ_P0077494 Ccdc129 protein_coding protein_coding MGP_LPJ_T0077495.1 MGP_LPJ_G0030679.1 mouse_genomes_project 6 55250091 55342716 + Ccdc129 protein_coding processed_transcript MGP_LPJ_T0001986.1 MGP_LPJ_G0001896.1 mouse_genomes_project 6 41874722 41875350 + TEC TEC MGP_LPJ_T0002117.1 MGP_LPJ_G0002027.1 mouse_genomes_project 6 94714946 94716409 + TEC TEC MGP_LPJ_T0008609.1 MGP_LPJ_G0006960.1 mouse_genomes_project 6 50550753 50552007 - 0610033M10Rik lincRNA lincRNA MGP_LPJ_T0008610.1 MGP_LPJ_G0006960.1 mouse_genomes_project 6 50550992 50551821 - 0610033M10Rik lincRNA lincRNA MGP_LPJ_T0001978.1 MGP_LPJ_G0001888.1 mouse_genomes_project 6 33080942 33082174 + TEC TEC MGP_LPJ_T0010777.1 MGP_LPJ_G0008895.1 mouse_genomes_project 6 28779685 28779783 + Mir335 miRNA miRNA MGP_LPJ_T0076023.1 MGP_LPJ_G0030343.1 mouse_genomes_project 6 2862903 3046053 - MGP_LPJ_P0076023 Slc25a13 protein_coding protein_coding MGP_LPJ_T0076024.1 MGP_LPJ_G0030343.1 mouse_genomes_project 6 2862904 3046108 - MGP_LPJ_P0076024 Slc25a13 protein_coding protein_coding MGP_LPJ_T0076025.1 MGP_LPJ_G0030343.1 mouse_genomes_project 6 2890942 2917873 - Slc25a13 protein_coding processed_transcript MGP_LPJ_T0076026.1 MGP_LPJ_G0030343.1 mouse_genomes_project 6 2937676 2997839 - Slc25a13 protein_coding processed_transcript MGP_LPJ_T0076027.1 MGP_LPJ_G0030343.1 mouse_genomes_project 6 2954802 3018526 - Slc25a13 protein_coding retained_intron MGP_LPJ_T0005129.1 MGP_LPJ_G0004376.1 mouse_genomes_project 6 139609962 139616471 + Gm19434 antisense antisense MGP_LPJ_T0002195.1 MGP_LPJ_G0002104.1 mouse_genomes_project 6 144545043 144546696 + TEC TEC MGP_LPJ_T0099675.1 MGP_LPJ_G0037938.1 mouse_genomes_project 6 123258247 123258353 - Gm24592 snRNA snRNA MGP_LPJ_T0008513.1 MGP_LPJ_G0006896.1 mouse_genomes_project 6 3465756 3547694 - Gm20618 lincRNA lincRNA MGP_LPJ_T0008514.1 MGP_LPJ_G0006896.1 mouse_genomes_project 6 3496892 3554765 - Gm20618 lincRNA lincRNA MGP_LPJ_T0015409.1 MGP_LPJ_G0013500.1 mouse_genomes_project 6 80342521 80343281 + processed_pseudogene processed_pseudogene MGP_LPJ_T0079995.1 MGP_LPJ_G0031189.1 mouse_genomes_project 6 128714592 128721352 + MGP_LPJ_P0079995 Vamp1 protein_coding protein_coding MGP_LPJ_T0079996.1 MGP_LPJ_G0031189.1 mouse_genomes_project 6 128714622 128721209 + MGP_LPJ_P0079996 Vamp1 protein_coding protein_coding MGP_LPJ_T0079997.1 MGP_LPJ_G0031189.1 mouse_genomes_project 6 128714622 128740230 + MGP_LPJ_P0079997 Vamp1 protein_coding protein_coding MGP_LPJ_T0079998.1 MGP_LPJ_G0031189.1 mouse_genomes_project 6 128717622 128720701 + MGP_LPJ_P0079998 Vamp1 protein_coding protein_coding MGP_LPJ_T0080000.1 MGP_LPJ_G0031189.1 mouse_genomes_project 6 128730310 128747244 + Vamp1 protein_coding processed_transcript MGP_LPJ_T0080001.1 MGP_LPJ_G0031189.1 mouse_genomes_project 6 128730310 128738915 + Vamp1 protein_coding processed_transcript MGP_LPJ_T0002208.1 MGP_LPJ_G0002117.1 mouse_genomes_project 6 151873502 151874746 + TEC TEC MGP_LPJ_T0001988.1 MGP_LPJ_G0001898.1 mouse_genomes_project 6 43779600 43783313 + TEC TEC MGP_LPJ_T0002098.1 MGP_LPJ_G0002008.1 mouse_genomes_project 6 90174726 90177614 + TEC TEC MGP_LPJ_T0077054.1 MGP_LPJ_G0030572.1 mouse_genomes_project 6 41478612 41479662 + MGP_LPJ_P0077054 Olfr444 protein_coding protein_coding MGP_LPJ_T0015358.1 MGP_LPJ_G0013449.1 mouse_genomes_project 6 66911713 66912100 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005117.1 MGP_LPJ_G0004366.1 mouse_genomes_project 6 132080963 132083530 + Gm26770 antisense antisense MGP_LPJ_T0015408.1 MGP_LPJ_G0013499.1 mouse_genomes_project 6 79849954 79850663 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004973.1 MGP_LPJ_G0004269.1 mouse_genomes_project 6 49644459 49672774 + 5430402O13Rik antisense antisense MGP_LPJ_T0004974.1 MGP_LPJ_G0004269.1 mouse_genomes_project 6 49644554 49672731 + 5430402O13Rik antisense antisense MGP_LPJ_T0076770.1 MGP_LPJ_G0030484.1 mouse_genomes_project 6 36311080 36375090 - MGP_LPJ_P0076770 Svopl protein_coding protein_coding MGP_LPJ_T0076771.1 MGP_LPJ_G0030484.1 mouse_genomes_project 6 36311853 36359186 - MGP_LPJ_P0076771 Svopl protein_coding nonsense_mediated_decay MGP_LPJ_T0076772.1 MGP_LPJ_G0030484.1 mouse_genomes_project 6 36343075 36351518 - Svopl protein_coding retained_intron MGP_LPJ_T0076773.1 MGP_LPJ_G0030484.1 mouse_genomes_project 6 36343377 36346869 - Svopl protein_coding retained_intron MGP_LPJ_T0076774.1 MGP_LPJ_G0030484.1 mouse_genomes_project 6 36343530 36375090 - Svopl protein_coding retained_intron MGP_LPJ_T0005031.1 MGP_LPJ_G0004307.1 mouse_genomes_project 6 87687983 87690729 - Gm44941 antisense antisense MGP_LPJ_T0008753.1 MGP_LPJ_G0007078.1 mouse_genomes_project 6 133077824 133109704 - 2310001H17Rik lincRNA lincRNA MGP_LPJ_T0008754.1 MGP_LPJ_G0007078.1 mouse_genomes_project 6 133082516 133105807 - 2310001H17Rik lincRNA lincRNA MGP_LPJ_T0008755.1 MGP_LPJ_G0007078.1 mouse_genomes_project 6 133086193 133109747 - 2310001H17Rik lincRNA lincRNA MGP_LPJ_T0008756.1 MGP_LPJ_G0007078.1 mouse_genomes_project 6 133104454 133110481 - 2310001H17Rik lincRNA lincRNA MGP_LPJ_T0008757.1 MGP_LPJ_G0007078.1 mouse_genomes_project 6 133104514 133110238 - 2310001H17Rik lincRNA lincRNA MGP_LPJ_T0008758.1 MGP_LPJ_G0007078.1 mouse_genomes_project 6 133104619 133105816 - 2310001H17Rik lincRNA lincRNA MGP_LPJ_T0015534.1 MGP_LPJ_G0013625.1 mouse_genomes_project 6 125523773 125524155 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002166.1 MGP_LPJ_G0002075.1 mouse_genomes_project 6 128188371 128188669 - TEC TEC MGP_LPJ_T0076058.1 MGP_LPJ_G0030353.1 mouse_genomes_project 6 5142117 5146543 - MGP_LPJ_P0076058 Rpa3 protein_coding protein_coding MGP_LPJ_T0076059.1 MGP_LPJ_G0030353.1 mouse_genomes_project 6 5143401 5146510 - Rpa3 protein_coding retained_intron MGP_LPJ_T0078915.1 MGP_LPJ_G0030989.1 mouse_genomes_project 6 104312224 104315770 - Cntn3 protein_coding retained_intron MGP_LPJ_T0078916.1 MGP_LPJ_G0030989.1 mouse_genomes_project 6 104312873 104740207 - MGP_LPJ_P0078916 Cntn3 protein_coding protein_coding MGP_LPJ_T0078917.1 MGP_LPJ_G0030989.1 mouse_genomes_project 6 104312875 104627739 - MGP_LPJ_P0078917 Cntn3 protein_coding protein_coding MGP_LPJ_T0076220.1 MGP_LPJ_G0030379.1 mouse_genomes_project 6 15444000 15499194 - MGP_LPJ_P0076220 Asz1 protein_coding protein_coding MGP_LPJ_T0076221.1 MGP_LPJ_G0030379.1 mouse_genomes_project 6 15444019 15499181 - Asz1 protein_coding retained_intron MGP_LPJ_T0076222.1 MGP_LPJ_G0030379.1 mouse_genomes_project 6 15459591 15460894 - Asz1 protein_coding retained_intron MGP_LPJ_T0076223.1 MGP_LPJ_G0030379.1 mouse_genomes_project 6 15461562 15499182 - MGP_LPJ_P0076223 Asz1 protein_coding nonsense_mediated_decay MGP_LPJ_T0076224.1 MGP_LPJ_G0030379.1 mouse_genomes_project 6 15462849 15499198 - Asz1 protein_coding processed_transcript MGP_LPJ_T0079432.1 MGP_LPJ_G0031084.1 mouse_genomes_project 6 121214506 121237823 - MGP_LPJ_P0079432 Zfp248 protein_coding protein_coding MGP_LPJ_T0079433.1 MGP_LPJ_G0031084.1 mouse_genomes_project 6 121218852 121238381 - Zfp248 protein_coding processed_transcript MGP_LPJ_T0079434.1 MGP_LPJ_G0031084.1 mouse_genomes_project 6 121218930 121238027 - MGP_LPJ_P0079434 Zfp248 protein_coding protein_coding MGP_LPJ_T0079435.1 MGP_LPJ_G0031084.1 mouse_genomes_project 6 121236060 121238464 - Zfp248 protein_coding retained_intron MGP_LPJ_T0079436.1 MGP_LPJ_G0031084.1 mouse_genomes_project 6 121236093 121238433 - Zfp248 protein_coding retained_intron MGP_LPJ_T0079437.1 MGP_LPJ_G0031084.1 mouse_genomes_project 6 121236129 121237718 - Zfp248 protein_coding processed_transcript MGP_LPJ_T0079962.1 MGP_LPJ_G0031184.1 mouse_genomes_project 6 128627678 128640340 + MGP_LPJ_P0079962 Nop2 protein_coding protein_coding MGP_LPJ_T0079963.1 MGP_LPJ_G0031184.1 mouse_genomes_project 6 128627816 128630486 + MGP_LPJ_P0079963 Nop2 protein_coding protein_coding MGP_LPJ_T0076034.1 MGP_LPJ_G0030346.1 mouse_genomes_project 6 3742187 3746469 - MGP_LPJ_P0076034 Dlx5 protein_coding protein_coding MGP_LPJ_T0076035.1 MGP_LPJ_G0030346.1 mouse_genomes_project 6 3742187 3746452 - MGP_LPJ_P0076035 Dlx5 protein_coding protein_coding MGP_LPJ_T0076036.1 MGP_LPJ_G0030346.1 mouse_genomes_project 6 3745075 3746466 - Dlx5 protein_coding retained_intron MGP_LPJ_T0000226.1 MGP_LPJ_G0000170.1 mouse_genomes_project 6 70296867 70297427 - MGP_LPJ_P0000226 Igkv8-30 IG_V_gene IG_V_gene MGP_LPJ_T0079203.1 MGP_LPJ_G0031041.1 mouse_genomes_project 6 117242334 117465185 + MGP_LPJ_P0079203 Atg7 protein_coding protein_coding MGP_LPJ_T0079204.1 MGP_LPJ_G0031041.1 mouse_genomes_project 6 117242349 117465183 + MGP_LPJ_P0079204 Atg7 protein_coding protein_coding MGP_LPJ_T0079205.1 MGP_LPJ_G0031041.1 mouse_genomes_project 6 117242353 117285239 + Atg7 protein_coding retained_intron MGP_LPJ_T0079206.1 MGP_LPJ_G0031041.1 mouse_genomes_project 6 117242355 117277908 + MGP_LPJ_P0079206 Atg7 protein_coding protein_coding MGP_LPJ_T0079207.1 MGP_LPJ_G0031041.1 mouse_genomes_project 6 117242359 117463706 + MGP_LPJ_P0079207 Atg7 protein_coding protein_coding MGP_LPJ_T0079208.1 MGP_LPJ_G0031041.1 mouse_genomes_project 6 117242364 117273557 + MGP_LPJ_P0079208 Atg7 protein_coding protein_coding MGP_LPJ_T0079209.1 MGP_LPJ_G0031041.1 mouse_genomes_project 6 117242364 117463797 + MGP_LPJ_P0079209 Atg7 protein_coding protein_coding MGP_LPJ_T0079210.1 MGP_LPJ_G0031041.1 mouse_genomes_project 6 117242366 117463806 + MGP_LPJ_P0079210 Atg7 protein_coding protein_coding MGP_LPJ_T0079211.1 MGP_LPJ_G0031041.1 mouse_genomes_project 6 117242366 117463800 + MGP_LPJ_P0079211 Atg7 protein_coding protein_coding MGP_LPJ_T0079212.1 MGP_LPJ_G0031041.1 mouse_genomes_project 6 117242368 117286560 + MGP_LPJ_P0079212 Atg7 protein_coding protein_coding MGP_LPJ_T0079213.1 MGP_LPJ_G0031041.1 mouse_genomes_project 6 117249277 117284843 + MGP_LPJ_P0079213 Atg7 protein_coding protein_coding MGP_LPJ_T0079214.1 MGP_LPJ_G0031041.1 mouse_genomes_project 6 117252869 117286543 + MGP_LPJ_P0079214 Atg7 protein_coding protein_coding MGP_LPJ_T0079215.1 MGP_LPJ_G0031041.1 mouse_genomes_project 6 117258484 117274155 + MGP_LPJ_P0079215 Atg7 protein_coding protein_coding MGP_LPJ_T0079216.1 MGP_LPJ_G0031041.1 mouse_genomes_project 6 117280480 117302166 + Atg7 protein_coding processed_transcript MGP_LPJ_T0079217.1 MGP_LPJ_G0031041.1 mouse_genomes_project 6 117283609 117285832 + Atg7 protein_coding retained_intron MGP_LPJ_T0079218.1 MGP_LPJ_G0031041.1 mouse_genomes_project 6 117323130 117463800 + Atg7 protein_coding processed_transcript MGP_LPJ_T0079219.1 MGP_LPJ_G0031041.1 mouse_genomes_project 6 117460726 117463798 + Atg7 protein_coding processed_transcript MGP_LPJ_T0015475.1 MGP_LPJ_G0013566.1 mouse_genomes_project 6 105481615 105482052 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011654.1 MGP_LPJ_G0009772.1 mouse_genomes_project 6 51372751 51372876 + Gm27867 misc_RNA misc_RNA MGP_LPJ_T0080308.1 MGP_LPJ_G0031295.1 mouse_genomes_project 6 137119743 137120779 + MGP_LPJ_P0080308 Tas2r131 protein_coding protein_coding MGP_LPJ_T0102256.1 MGP_LPJ_G0040293.1 mouse_genomes_project 6 124887090 124955639 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0079427.1 MGP_LPJ_G0031082.1 mouse_genomes_project 6 120921186 120977607 - MGP_LPJ_P0079427 Ret protein_coding protein_coding MGP_LPJ_T0079428.1 MGP_LPJ_G0031082.1 mouse_genomes_project 6 120924007 120978192 - MGP_LPJ_P0079428 Ret protein_coding protein_coding MGP_LPJ_T0077540.1 MGP_LPJ_G0030690.1 mouse_genomes_project 6 56422739 56436310 - MGP_LPJ_P0077540 protein_coding protein_coding MGP_LPJ_T0080435.1 MGP_LPJ_G0031330.1 mouse_genomes_project 6 141386565 141388399 + MGP_LPJ_P0080435 H2afj protein_coding protein_coding MGP_LPJ_T0080436.1 MGP_LPJ_G0031330.1 mouse_genomes_project 6 141386654 141388113 + MGP_LPJ_P0080436 H2afj protein_coding protein_coding MGP_LPJ_T0010765.1 MGP_LPJ_G0008883.1 mouse_genomes_project 6 1849809 1849914 - Gm44333 miRNA miRNA MGP_LPJ_T0078894.1 MGP_LPJ_G0030982.1 mouse_genomes_project 6 101701094 101703482 + MGP_LPJ_P0078894 Gpr27 protein_coding protein_coding MGP_LPJ_T0099635.1 MGP_LPJ_G0037898.1 mouse_genomes_project 6 17092736 17092842 + Gm22828 snRNA snRNA MGP_LPJ_T0080317.1 MGP_LPJ_G0031304.1 mouse_genomes_project 6 137366538 137370020 + MGP_LPJ_P0080317 Smim10l1 protein_coding protein_coding MGP_LPJ_T0080318.1 MGP_LPJ_G0031304.1 mouse_genomes_project 6 137366894 137373174 + MGP_LPJ_P0080318 Smim10l1 protein_coding protein_coding MGP_LPJ_T0080319.1 MGP_LPJ_G0031304.1 mouse_genomes_project 6 137366928 137373176 + MGP_LPJ_P0080319 Smim10l1 protein_coding nonsense_mediated_decay MGP_LPJ_T0080320.1 MGP_LPJ_G0031304.1 mouse_genomes_project 6 137367130 137369699 + MGP_LPJ_P0080320 Smim10l1 protein_coding protein_coding MGP_LPJ_T0004937.1 MGP_LPJ_G0004238.1 mouse_genomes_project 6 15815459 15818626 + Gm15594 antisense antisense MGP_LPJ_T0010807.1 MGP_LPJ_G0008925.1 mouse_genomes_project 6 92200610 92200737 - Gm24816 miRNA miRNA MGP_LPJ_T0076839.1 MGP_LPJ_G0030498.1 mouse_genomes_project 6 37467220 37502793 - MGP_LPJ_P0076839 Parp12 protein_coding protein_coding MGP_LPJ_T0076840.1 MGP_LPJ_G0030498.1 mouse_genomes_project 6 37469815 37471893 - Parp12 protein_coding retained_intron MGP_LPJ_T0008707.1 MGP_LPJ_G0007036.1 mouse_genomes_project 6 103137876 103200288 + Gm43950 lincRNA lincRNA MGP_LPJ_T0078261.1 MGP_LPJ_G0030853.1 mouse_genomes_project 6 86613911 86630873 + MGP_LPJ_P0078261 Cct7 protein_coding protein_coding MGP_LPJ_T0078262.1 MGP_LPJ_G0030853.1 mouse_genomes_project 6 86614416 86618300 + Cct7 protein_coding retained_intron MGP_LPJ_T0078263.1 MGP_LPJ_G0030853.1 mouse_genomes_project 6 86614449 86630680 + MGP_LPJ_P0078263 Cct7 protein_coding nonsense_mediated_decay MGP_LPJ_T0078264.1 MGP_LPJ_G0030853.1 mouse_genomes_project 6 86614489 86630680 + MGP_LPJ_P0078264 Cct7 protein_coding protein_coding MGP_LPJ_T0078265.1 MGP_LPJ_G0030853.1 mouse_genomes_project 6 86623135 86627308 + Cct7 protein_coding retained_intron MGP_LPJ_T0078266.1 MGP_LPJ_G0030853.1 mouse_genomes_project 6 86624168 86628335 + Cct7 protein_coding retained_intron MGP_LPJ_T0078267.1 MGP_LPJ_G0030853.1 mouse_genomes_project 6 86624549 86628486 + MGP_LPJ_P0078267 Cct7 protein_coding protein_coding MGP_LPJ_T0000348.1 MGP_LPJ_G0000286.1 mouse_genomes_project 6 69858564 69859027 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0005149.1 MGP_LPJ_G0004393.1 mouse_genomes_project 6 150263642 150268898 + Gm15543 antisense antisense MGP_LPJ_T0000227.1 MGP_LPJ_G0000171.1 mouse_genomes_project 6 70345646 70346313 - MGP_LPJ_P0000227 Igkv6-29 IG_V_gene IG_V_gene MGP_LPJ_T0080266.1 MGP_LPJ_G0031269.1 mouse_genomes_project 6 134345067 134371650 - protein_coding retained_intron MGP_LPJ_T0098661.1 MGP_LPJ_G0036931.1 mouse_genomes_project 6 139292131 139296300 - sense_intronic sense_intronic MGP_LPJ_T0015564.1 MGP_LPJ_G0013655.1 mouse_genomes_project 6 132407750 132407864 - processed_pseudogene processed_pseudogene MGP_LPJ_T0080397.1 MGP_LPJ_G0031322.1 mouse_genomes_project 6 139662490 139673096 - MGP_LPJ_P0080397 Gsg1 protein_coding protein_coding MGP_LPJ_T0080398.1 MGP_LPJ_G0031322.1 mouse_genomes_project 6 139662493 139684423 - MGP_LPJ_P0080398 Gsg1 protein_coding protein_coding MGP_LPJ_T0080399.1 MGP_LPJ_G0031322.1 mouse_genomes_project 6 139662493 139684579 - MGP_LPJ_P0080399 Gsg1 protein_coding protein_coding MGP_LPJ_T0080400.1 MGP_LPJ_G0031322.1 mouse_genomes_project 6 139662500 139684604 - MGP_LPJ_P0080400 Gsg1 protein_coding protein_coding MGP_LPJ_T0079375.1 MGP_LPJ_G0031072.1 mouse_genomes_project 6 119349700 119393841 - MGP_LPJ_P0079375 Rassf4 protein_coding protein_coding MGP_LPJ_T0079376.1 MGP_LPJ_G0031072.1 mouse_genomes_project 6 119355916 119393698 - MGP_LPJ_P0079376 Rassf4 protein_coding protein_coding MGP_LPJ_T0079377.1 MGP_LPJ_G0031072.1 mouse_genomes_project 6 119356180 119357691 - Rassf4 protein_coding processed_transcript MGP_LPJ_T0079378.1 MGP_LPJ_G0031072.1 mouse_genomes_project 6 119359613 119393678 - Rassf4 protein_coding retained_intron MGP_LPJ_T0079379.1 MGP_LPJ_G0031072.1 mouse_genomes_project 6 119361926 119364625 - Rassf4 protein_coding retained_intron MGP_LPJ_T0079380.1 MGP_LPJ_G0031072.1 mouse_genomes_project 6 119362591 119393660 - MGP_LPJ_P0079380 Rassf4 protein_coding protein_coding MGP_LPJ_T0079381.1 MGP_LPJ_G0031072.1 mouse_genomes_project 6 119362662 119393687 - MGP_LPJ_P0079381 Rassf4 protein_coding protein_coding MGP_LPJ_T0015240.1 MGP_LPJ_G0013331.1 mouse_genomes_project 6 28754799 28755030 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001971.1 MGP_LPJ_G0001881.1 mouse_genomes_project 6 28161454 28163676 + TEC TEC MGP_LPJ_T0015236.1 MGP_LPJ_G0013327.1 mouse_genomes_project 6 26220684 26221936 - processed_pseudogene processed_pseudogene MGP_LPJ_T0076717.1 MGP_LPJ_G0030471.1 mouse_genomes_project 6 33144474 33164359 + MGP_LPJ_P0076717 Stra8 protein_coding protein_coding MGP_LPJ_T0076718.1 MGP_LPJ_G0030471.1 mouse_genomes_project 6 33145271 33164357 + MGP_LPJ_P0076718 Stra8 protein_coding protein_coding MGP_LPJ_T0076719.1 MGP_LPJ_G0030471.1 mouse_genomes_project 6 33145315 33158376 + MGP_LPJ_P0076719 Stra8 protein_coding protein_coding MGP_LPJ_T0076720.1 MGP_LPJ_G0030471.1 mouse_genomes_project 6 33145321 33164357 + MGP_LPJ_P0076720 Stra8 protein_coding protein_coding MGP_LPJ_T0008675.1 MGP_LPJ_G0007013.1 mouse_genomes_project 6 88974358 88975798 + Gm44201 lincRNA lincRNA MGP_LPJ_T0079732.1 MGP_LPJ_G0031140.1 mouse_genomes_project 6 126552932 126563015 + MGP_LPJ_P0079732 Clec4n protein_coding protein_coding MGP_LPJ_T0079733.1 MGP_LPJ_G0031140.1 mouse_genomes_project 6 126552943 126563013 + MGP_LPJ_P0079733 Clec4n protein_coding protein_coding MGP_LPJ_T0079734.1 MGP_LPJ_G0031140.1 mouse_genomes_project 6 126552946 126553919 + Clec4n protein_coding processed_transcript MGP_LPJ_T0079735.1 MGP_LPJ_G0031140.1 mouse_genomes_project 6 126552946 126563013 + MGP_LPJ_P0079735 Clec4n protein_coding protein_coding MGP_LPJ_T0079736.1 MGP_LPJ_G0031140.1 mouse_genomes_project 6 126552946 126563013 + MGP_LPJ_P0079736 Clec4n protein_coding nonsense_mediated_decay MGP_LPJ_T0079737.1 MGP_LPJ_G0031140.1 mouse_genomes_project 6 126553107 126562579 + MGP_LPJ_P0079737 Clec4n protein_coding protein_coding MGP_LPJ_T0004992.1 MGP_LPJ_G0004281.1 mouse_genomes_project 6 58526372 58563009 + BB365896 antisense antisense MGP_LPJ_T0075969.1 MGP_LPJ_G0030334.1 mouse_genomes_project 6 1429578 1504510 - MGP_LPJ_P0075969 Sgce protein_coding protein_coding MGP_LPJ_T0075970.1 MGP_LPJ_G0030334.1 mouse_genomes_project 6 1429578 1504538 - MGP_LPJ_P0075970 Sgce protein_coding protein_coding MGP_LPJ_T0075971.1 MGP_LPJ_G0030334.1 mouse_genomes_project 6 1429582 1504541 - MGP_LPJ_P0075971 Sgce protein_coding protein_coding MGP_LPJ_T0075972.1 MGP_LPJ_G0030334.1 mouse_genomes_project 6 1429582 1504491 - MGP_LPJ_P0075972 Sgce protein_coding protein_coding MGP_LPJ_T0075973.1 MGP_LPJ_G0030334.1 mouse_genomes_project 6 1429612 1504450 - MGP_LPJ_P0075973 Sgce protein_coding protein_coding MGP_LPJ_T0075974.1 MGP_LPJ_G0030334.1 mouse_genomes_project 6 1429646 1504522 - MGP_LPJ_P0075974 Sgce protein_coding protein_coding MGP_LPJ_T0075975.1 MGP_LPJ_G0030334.1 mouse_genomes_project 6 1429646 1504458 - MGP_LPJ_P0075975 Sgce protein_coding protein_coding MGP_LPJ_T0075976.1 MGP_LPJ_G0030334.1 mouse_genomes_project 6 1432937 1504491 - Sgce protein_coding retained_intron MGP_LPJ_T0075977.1 MGP_LPJ_G0030334.1 mouse_genomes_project 6 1443746 1504414 - Sgce protein_coding retained_intron MGP_LPJ_T0075978.1 MGP_LPJ_G0030334.1 mouse_genomes_project 6 1446562 1504404 - Sgce protein_coding processed_transcript MGP_LPJ_T0075979.1 MGP_LPJ_G0030334.1 mouse_genomes_project 6 1446734 1504397 - MGP_LPJ_P0075979 Sgce protein_coding nonsense_mediated_decay MGP_LPJ_T0075980.1 MGP_LPJ_G0030334.1 mouse_genomes_project 6 1462736 1467150 - Sgce protein_coding retained_intron MGP_LPJ_T0075981.1 MGP_LPJ_G0030334.1 mouse_genomes_project 6 1494360 1497426 - Sgce protein_coding retained_intron MGP_LPJ_T0078733.1 MGP_LPJ_G0030951.1 mouse_genomes_project 6 93456974 93463922 + Ccdc174 protein_coding retained_intron MGP_LPJ_T0078734.1 MGP_LPJ_G0030951.1 mouse_genomes_project 6 93456974 93480641 + MGP_LPJ_P0078734 Ccdc174 protein_coding protein_coding MGP_LPJ_T0078735.1 MGP_LPJ_G0030951.1 mouse_genomes_project 6 93456974 93480641 + MGP_LPJ_P0078735 Ccdc174 protein_coding nonsense_mediated_decay MGP_LPJ_T0078736.1 MGP_LPJ_G0030951.1 mouse_genomes_project 6 93456993 93459441 + Ccdc174 protein_coding retained_intron MGP_LPJ_T0078737.1 MGP_LPJ_G0030951.1 mouse_genomes_project 6 93456996 93469243 + Ccdc174 protein_coding retained_intron MGP_LPJ_T0078738.1 MGP_LPJ_G0030951.1 mouse_genomes_project 6 93473144 93476091 + Ccdc174 protein_coding retained_intron MGP_LPJ_T0078739.1 MGP_LPJ_G0030951.1 mouse_genomes_project 6 93473601 93476137 + Ccdc174 protein_coding retained_intron MGP_LPJ_T0102225.1 MGP_LPJ_G0040262.1 mouse_genomes_project 6 56653088 56653925 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0010811.1 MGP_LPJ_G0008929.1 mouse_genomes_project 6 101474594 101474706 - Gm22328 miRNA miRNA MGP_LPJ_T0004984.1 MGP_LPJ_G0004274.1 mouse_genomes_project 6 51529702 51536201 - Evx1os antisense antisense MGP_LPJ_T0004985.1 MGP_LPJ_G0004274.1 mouse_genomes_project 6 51532149 51534874 - Evx1os antisense antisense MGP_LPJ_T0011640.1 MGP_LPJ_G0009758.1 mouse_genomes_project 6 15040503 15040682 + Gm27365 misc_RNA misc_RNA MGP_LPJ_T0077324.1 MGP_LPJ_G0030638.1 mouse_genomes_project 6 50628010 50632961 + Cbx3 protein_coding retained_intron MGP_LPJ_T0077325.1 MGP_LPJ_G0030638.1 mouse_genomes_project 6 50628024 50629408 + Cbx3 protein_coding retained_intron MGP_LPJ_T0077326.1 MGP_LPJ_G0030638.1 mouse_genomes_project 6 50628093 50637386 + MGP_LPJ_P0077326 Cbx3 protein_coding protein_coding MGP_LPJ_T0077327.1 MGP_LPJ_G0030638.1 mouse_genomes_project 6 50629192 50642079 + MGP_LPJ_P0077327 Cbx3 protein_coding unknown_likely_coding MGP_LPJ_T0077328.1 MGP_LPJ_G0030638.1 mouse_genomes_project 6 50636243 50639169 + Cbx3 protein_coding retained_intron MGP_LPJ_T0015589.1 MGP_LPJ_G0013680.1 mouse_genomes_project 6 136662708 136663197 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015390.1 MGP_LPJ_G0013481.1 mouse_genomes_project 6 72100029 72100603 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004941.1 MGP_LPJ_G0004241.1 mouse_genomes_project 6 27243511 27243923 - Gm17172 antisense antisense MGP_LPJ_T0015626.1 MGP_LPJ_G0013717.1 mouse_genomes_project 6 152427916 152428729 + processed_pseudogene processed_pseudogene MGP_LPJ_T0080105.1 MGP_LPJ_G0031216.1 mouse_genomes_project 6 131529562 131605588 + MGP_LPJ_P0080105 Tspan11 protein_coding protein_coding MGP_LPJ_T0080106.1 MGP_LPJ_G0031216.1 mouse_genomes_project 6 131529752 131570329 + Tspan11 protein_coding retained_intron MGP_LPJ_T0002056.1 MGP_LPJ_G0001966.1 mouse_genomes_project 6 78722747 78724800 + TEC TEC MGP_LPJ_T0078299.1 MGP_LPJ_G0030864.1 mouse_genomes_project 6 87226831 87248443 - MGP_LPJ_P0078299 Dusp11 protein_coding protein_coding MGP_LPJ_T0078300.1 MGP_LPJ_G0030864.1 mouse_genomes_project 6 87232311 87244494 - MGP_LPJ_P0078300 Dusp11 protein_coding nonsense_mediated_decay MGP_LPJ_T0078301.1 MGP_LPJ_G0030864.1 mouse_genomes_project 6 87234922 87236096 - Dusp11 protein_coding retained_intron MGP_LPJ_T0078302.1 MGP_LPJ_G0030864.1 mouse_genomes_project 6 87234927 87239155 - Dusp11 protein_coding processed_transcript MGP_LPJ_T0078303.1 MGP_LPJ_G0030864.1 mouse_genomes_project 6 87235250 87239039 - Dusp11 protein_coding retained_intron MGP_LPJ_T0078304.1 MGP_LPJ_G0030864.1 mouse_genomes_project 6 87240174 87248443 - Dusp11 protein_coding processed_transcript MGP_LPJ_T0078305.1 MGP_LPJ_G0030864.1 mouse_genomes_project 6 87240276 87248383 - Dusp11 protein_coding processed_transcript MGP_LPJ_T0078306.1 MGP_LPJ_G0030864.1 mouse_genomes_project 6 87247097 87248418 - Dusp11 protein_coding retained_intron MGP_LPJ_T0080477.1 MGP_LPJ_G0031341.1 mouse_genomes_project 6 142143244 142321864 - MGP_LPJ_P0080477 Eps8 protein_coding protein_coding MGP_LPJ_T0080478.1 MGP_LPJ_G0031341.1 mouse_genomes_project 6 142143667 142241841 - MGP_LPJ_P0080478 Eps8 protein_coding protein_coding MGP_LPJ_T0080479.1 MGP_LPJ_G0031341.1 mouse_genomes_project 6 142144177 142321864 - MGP_LPJ_P0080479 Eps8 protein_coding protein_coding MGP_LPJ_T0080480.1 MGP_LPJ_G0031341.1 mouse_genomes_project 6 142168292 142320879 - MGP_LPJ_P0080480 Eps8 protein_coding protein_coding MGP_LPJ_T0080481.1 MGP_LPJ_G0031341.1 mouse_genomes_project 6 142183006 142189221 - Eps8 protein_coding processed_transcript MGP_LPJ_T0080482.1 MGP_LPJ_G0031341.1 mouse_genomes_project 6 142186596 142328312 - MGP_LPJ_P0080482 Eps8 protein_coding protein_coding MGP_LPJ_T0080483.1 MGP_LPJ_G0031341.1 mouse_genomes_project 6 142186620 142189164 - Eps8 protein_coding retained_intron MGP_LPJ_T0080484.1 MGP_LPJ_G0031341.1 mouse_genomes_project 6 142192505 142260838 - MGP_LPJ_P0080484 Eps8 protein_coding protein_coding MGP_LPJ_T0080485.1 MGP_LPJ_G0031341.1 mouse_genomes_project 6 142198364 142321808 - Eps8 protein_coding processed_transcript MGP_LPJ_T0080486.1 MGP_LPJ_G0031341.1 mouse_genomes_project 6 142205949 142209135 - Eps8 protein_coding retained_intron MGP_LPJ_T0080487.1 MGP_LPJ_G0031341.1 mouse_genomes_project 6 142208684 142320879 - MGP_LPJ_P0080487 Eps8 protein_coding protein_coding MGP_LPJ_T0080488.1 MGP_LPJ_G0031341.1 mouse_genomes_project 6 142210382 142321821 - MGP_LPJ_P0080488 Eps8 protein_coding protein_coding MGP_LPJ_T0080489.1 MGP_LPJ_G0031341.1 mouse_genomes_project 6 142237953 142241583 - Eps8 protein_coding retained_intron MGP_LPJ_T0076825.1 MGP_LPJ_G0030495.1 mouse_genomes_project 6 37024934 37050253 + MGP_LPJ_P0076825 Clec2l protein_coding protein_coding MGP_LPJ_T0008576.1 MGP_LPJ_G0006939.1 mouse_genomes_project 6 33580367 33586358 + 1700065J11Rik lincRNA lincRNA MGP_LPJ_T0078622.1 MGP_LPJ_G0030926.1 mouse_genomes_project 6 91493662 91495000 - MGP_LPJ_P0078622 protein_coding protein_coding MGP_LPJ_T0100870.1 MGP_LPJ_G0039133.1 mouse_genomes_project 6 5407450 5407571 - Gm26075 snoRNA snoRNA MGP_LPJ_T0002216.1 MGP_LPJ_G0002125.1 mouse_genomes_project 6 154308995 154311718 - TEC TEC MGP_LPJ_T0000229.1 MGP_LPJ_G0000173.1 mouse_genomes_project 6 70349297 70352180 - MGP_LPJ_P0000229 Igkv8-28 IG_V_gene IG_V_gene MGP_LPJ_T0000230.1 MGP_LPJ_G0000173.1 mouse_genomes_project 6 70349297 70349602 - MGP_LPJ_P0000230 Igkv8-28 IG_V_gene IG_V_gene MGP_LPJ_T0077075.1 MGP_LPJ_G0030582.1 mouse_genomes_project 6 41967311 42301667 - MGP_LPJ_P0077075 Tpk1 protein_coding protein_coding MGP_LPJ_T0077076.1 MGP_LPJ_G0030582.1 mouse_genomes_project 6 41967383 42267444 - Tpk1 protein_coding processed_transcript MGP_LPJ_T0077077.1 MGP_LPJ_G0030582.1 mouse_genomes_project 6 41967584 42301564 - MGP_LPJ_P0077077 Tpk1 protein_coding protein_coding MGP_LPJ_T0077078.1 MGP_LPJ_G0030582.1 mouse_genomes_project 6 41969152 42105177 - Tpk1 protein_coding processed_transcript MGP_LPJ_T0077079.1 MGP_LPJ_G0030582.1 mouse_genomes_project 6 42227806 42301608 - Tpk1 protein_coding processed_transcript MGP_LPJ_T0077080.1 MGP_LPJ_G0030582.1 mouse_genomes_project 6 42229258 42301270 - Tpk1 protein_coding processed_transcript MGP_LPJ_T0078443.1 MGP_LPJ_G0030891.1 mouse_genomes_project 6 89005958 89051361 - MGP_LPJ_P0078443 Aplf protein_coding protein_coding MGP_LPJ_T0078444.1 MGP_LPJ_G0030891.1 mouse_genomes_project 6 89006989 89051278 - MGP_LPJ_P0078444 Aplf protein_coding nonsense_mediated_decay MGP_LPJ_T0078445.1 MGP_LPJ_G0030891.1 mouse_genomes_project 6 89006994 89051407 - MGP_LPJ_P0078445 Aplf protein_coding protein_coding MGP_LPJ_T0078446.1 MGP_LPJ_G0030891.1 mouse_genomes_project 6 89028479 89051343 - Aplf protein_coding retained_intron MGP_LPJ_T0002081.1 MGP_LPJ_G0001991.1 mouse_genomes_project 6 88316534 88318330 + TEC TEC MGP_LPJ_T0077992.1 MGP_LPJ_G0030806.1 mouse_genomes_project 6 83932947 84025774 + MGP_LPJ_P0077992 M1ap protein_coding protein_coding MGP_LPJ_T0077993.1 MGP_LPJ_G0030806.1 mouse_genomes_project 6 83996374 84025526 + MGP_LPJ_P0077993 M1ap protein_coding unknown_likely_coding MGP_LPJ_T0077994.1 MGP_LPJ_G0030806.1 mouse_genomes_project 6 84021934 84025900 + MGP_LPJ_P0077994 M1ap protein_coding protein_coding MGP_LPJ_T0077995.1 MGP_LPJ_G0030806.1 mouse_genomes_project 6 84023860 84025412 + M1ap protein_coding retained_intron MGP_LPJ_T0002107.1 MGP_LPJ_G0002017.1 mouse_genomes_project 6 92752408 92755239 - TEC TEC MGP_LPJ_T0002708.1 MGP_LPJ_G0002588.1 mouse_genomes_project 6 39608439 39608901 + MGP_LPJ_P0002708 Trbv13-1 TR_V_gene TR_V_gene MGP_LPJ_T0002709.1 MGP_LPJ_G0002588.1 mouse_genomes_project 6 39608468 39608901 + MGP_LPJ_P0002709 Trbv13-1 TR_V_gene TR_V_gene MGP_LPJ_T0001974.1 MGP_LPJ_G0001884.1 mouse_genomes_project 6 29390852 29393588 + TEC TEC MGP_LPJ_T0080290.1 MGP_LPJ_G0031278.1 mouse_genomes_project 6 135979138 135980047 - MGP_LPJ_P0080290 Tas2r104 protein_coding protein_coding MGP_LPJ_T0015220.1 MGP_LPJ_G0013311.1 mouse_genomes_project 6 17256473 17257239 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008721.1 MGP_LPJ_G0007048.1 mouse_genomes_project 6 116294723 116295652 + Gm44053 lincRNA lincRNA MGP_LPJ_T0015619.1 MGP_LPJ_G0013710.1 mouse_genomes_project 6 148111428 148111631 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015271.1 MGP_LPJ_G0013362.1 mouse_genomes_project 6 42494826 42495496 - processed_pseudogene processed_pseudogene MGP_LPJ_T0080093.1 MGP_LPJ_G0031213.1 mouse_genomes_project 6 131063806 131092628 + MGP_LPJ_P0080093 Parp11 protein_coding protein_coding MGP_LPJ_T0080094.1 MGP_LPJ_G0031213.1 mouse_genomes_project 6 131068166 131086522 + Parp11 protein_coding retained_intron MGP_LPJ_T0080095.1 MGP_LPJ_G0031213.1 mouse_genomes_project 6 131068194 131092579 + MGP_LPJ_P0080095 Parp11 protein_coding nonsense_mediated_decay MGP_LPJ_T0080096.1 MGP_LPJ_G0031213.1 mouse_genomes_project 6 131068212 131085420 + Parp11 protein_coding retained_intron MGP_LPJ_T0080097.1 MGP_LPJ_G0031213.1 mouse_genomes_project 6 131068221 131093550 + MGP_LPJ_P0080097 Parp11 protein_coding protein_coding MGP_LPJ_T0080098.1 MGP_LPJ_G0031213.1 mouse_genomes_project 6 131068343 131111096 + MGP_LPJ_P0080098 Parp11 protein_coding protein_coding MGP_LPJ_T0080099.1 MGP_LPJ_G0031213.1 mouse_genomes_project 6 131086020 131087780 + Parp11 protein_coding retained_intron MGP_LPJ_T0080100.1 MGP_LPJ_G0031213.1 mouse_genomes_project 6 131088638 131093441 + Parp11 protein_coding retained_intron MGP_LPJ_T0080101.1 MGP_LPJ_G0031213.1 mouse_genomes_project 6 131092149 131107115 + Parp11 protein_coding retained_intron MGP_LPJ_T0078811.1 MGP_LPJ_G0030968.1 mouse_genomes_project 6 97929544 98496383 + MGP_LPJ_P0078811 Fam19a1 protein_coding protein_coding MGP_LPJ_T0078812.1 MGP_LPJ_G0030968.1 mouse_genomes_project 6 97929632 97954178 + Fam19a1 protein_coding processed_transcript MGP_LPJ_T0078813.1 MGP_LPJ_G0030968.1 mouse_genomes_project 6 97931039 97932301 + Fam19a1 protein_coding processed_transcript MGP_LPJ_T0078814.1 MGP_LPJ_G0030968.1 mouse_genomes_project 6 97931694 98495652 + MGP_LPJ_P0078814 Fam19a1 protein_coding protein_coding MGP_LPJ_T0008718.1 MGP_LPJ_G0007045.1 mouse_genomes_project 6 115211557 115219878 + Gm26799 lincRNA lincRNA MGP_LPJ_T0100907.1 MGP_LPJ_G0039170.1 mouse_genomes_project 6 86269863 86269979 + Gm22893 snoRNA snoRNA MGP_LPJ_T0015329.1 MGP_LPJ_G0013420.1 mouse_genomes_project 6 62345388 62346520 + processed_pseudogene processed_pseudogene MGP_LPJ_T0078100.1 MGP_LPJ_G0030826.1 mouse_genomes_project 6 84317691 84329505 - MGP_LPJ_P0078100 Mthfd2 protein_coding protein_coding MGP_LPJ_T0078101.1 MGP_LPJ_G0030826.1 mouse_genomes_project 6 84318402 84329452 - MGP_LPJ_P0078101 Mthfd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0078102.1 MGP_LPJ_G0030826.1 mouse_genomes_project 6 84318558 84321207 - Mthfd2 protein_coding retained_intron MGP_LPJ_T0078103.1 MGP_LPJ_G0030826.1 mouse_genomes_project 6 84321233 84322448 - Mthfd2 protein_coding retained_intron MGP_LPJ_T0078104.1 MGP_LPJ_G0030826.1 mouse_genomes_project 6 84321451 84323493 - Mthfd2 protein_coding retained_intron MGP_LPJ_T0078105.1 MGP_LPJ_G0030826.1 mouse_genomes_project 6 84323244 84324303 - Mthfd2 protein_coding retained_intron MGP_LPJ_T0078106.1 MGP_LPJ_G0030826.1 mouse_genomes_project 6 84323768 84338813 - MGP_LPJ_P0078106 Mthfd2 protein_coding protein_coding MGP_LPJ_T0078309.1 MGP_LPJ_G0030866.1 mouse_genomes_project 6 87321228 87398354 + Add2 protein_coding retained_intron MGP_LPJ_T0078310.1 MGP_LPJ_G0030866.1 mouse_genomes_project 6 87321251 87425717 + MGP_LPJ_P0078310 Add2 protein_coding protein_coding MGP_LPJ_T0078311.1 MGP_LPJ_G0030866.1 mouse_genomes_project 6 87321294 87410797 + MGP_LPJ_P0078311 Add2 protein_coding protein_coding MGP_LPJ_T0078312.1 MGP_LPJ_G0030866.1 mouse_genomes_project 6 87349903 87394630 + MGP_LPJ_P0078312 Add2 protein_coding protein_coding MGP_LPJ_T0078313.1 MGP_LPJ_G0030866.1 mouse_genomes_project 6 87379171 87420877 + MGP_LPJ_P0078313 Add2 protein_coding protein_coding MGP_LPJ_T0078314.1 MGP_LPJ_G0030866.1 mouse_genomes_project 6 87379171 87410795 + MGP_LPJ_P0078314 Add2 protein_coding protein_coding MGP_LPJ_T0078315.1 MGP_LPJ_G0030866.1 mouse_genomes_project 6 87379198 87420877 + MGP_LPJ_P0078315 Add2 protein_coding protein_coding MGP_LPJ_T0078316.1 MGP_LPJ_G0030866.1 mouse_genomes_project 6 87383949 87420148 + MGP_LPJ_P0078316 Add2 protein_coding protein_coding MGP_LPJ_T0078317.1 MGP_LPJ_G0030866.1 mouse_genomes_project 6 87383949 87409626 + MGP_LPJ_P0078317 Add2 protein_coding protein_coding MGP_LPJ_T0078318.1 MGP_LPJ_G0030866.1 mouse_genomes_project 6 87387023 87420124 + MGP_LPJ_P0078318 Add2 protein_coding protein_coding MGP_LPJ_T0098715.1 MGP_LPJ_G0036979.1 mouse_genomes_project 6 93077071 93087088 + Gm45216 sense_overlapping sense_overlapping MGP_LPJ_T0008705.1 MGP_LPJ_G0007034.1 mouse_genomes_project 6 102583478 102584877 + Gm44107 lincRNA lincRNA MGP_LPJ_T0008516.1 MGP_LPJ_G0006898.1 mouse_genomes_project 6 4188925 4196778 + Gm19272 lincRNA lincRNA MGP_LPJ_T0008517.1 MGP_LPJ_G0006898.1 mouse_genomes_project 6 4188925 4193771 + Gm19272 lincRNA lincRNA MGP_LPJ_T0099648.1 MGP_LPJ_G0037911.1 mouse_genomes_project 6 41340869 41340975 + Gm23982 snRNA snRNA MGP_LPJ_T0002089.1 MGP_LPJ_G0001999.1 mouse_genomes_project 6 89192112 89192977 - TEC TEC MGP_LPJ_T0080244.1 MGP_LPJ_G0031254.1 mouse_genomes_project 6 133535514 133539752 - MGP_LPJ_P0080244 Klrc3 protein_coding protein_coding MGP_LPJ_T0080245.1 MGP_LPJ_G0031254.1 mouse_genomes_project 6 133535514 133539752 - MGP_LPJ_P0080245 Klrc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0080246.1 MGP_LPJ_G0031254.1 mouse_genomes_project 6 133535535 133539752 - MGP_LPJ_P0080246 Klrc3 protein_coding protein_coding MGP_LPJ_T0079387.1 MGP_LPJ_G0031075.1 mouse_genomes_project 6 119888321 119894849 + MGP_LPJ_P0079387 Cxcl12 protein_coding protein_coding MGP_LPJ_T0079388.1 MGP_LPJ_G0031075.1 mouse_genomes_project 6 119888360 119901146 + MGP_LPJ_P0079388 Cxcl12 protein_coding protein_coding MGP_LPJ_T0079389.1 MGP_LPJ_G0031075.1 mouse_genomes_project 6 119888363 119895907 + Cxcl12 protein_coding retained_intron MGP_LPJ_T0079390.1 MGP_LPJ_G0031075.1 mouse_genomes_project 6 119888363 119901147 + MGP_LPJ_P0079390 Cxcl12 protein_coding protein_coding MGP_LPJ_T0077947.1 MGP_LPJ_G0030793.1 mouse_genomes_project 6 79112511 79115618 + MGP_LPJ_P0077947 Reg3a protein_coding protein_coding MGP_LPJ_T0076948.1 MGP_LPJ_G0030532.1 mouse_genomes_project 6 39927433 39930128 - MGP_LPJ_P0076948 protein_coding protein_coding MGP_LPJ_T0078836.1 MGP_LPJ_G0030975.1 mouse_genomes_project 6 99105969 99121355 - MGP_LPJ_P0078836 Lmod3 protein_coding protein_coding MGP_LPJ_T0078993.1 MGP_LPJ_G0031005.1 mouse_genomes_project 6 114858857 114893583 - MGP_LPJ_P0078993 Ssu2 protein_coding protein_coding MGP_LPJ_T0078994.1 MGP_LPJ_G0031005.1 mouse_genomes_project 6 114868935 114883295 - Ssu2 protein_coding processed_transcript MGP_LPJ_T0078995.1 MGP_LPJ_G0031005.1 mouse_genomes_project 6 114869470 114876754 - Ssu2 protein_coding retained_intron MGP_LPJ_T0015180.1 MGP_LPJ_G0013271.1 mouse_genomes_project 6 1105693 1106300 + processed_pseudogene processed_pseudogene MGP_LPJ_T0080146.1 MGP_LPJ_G0031225.1 mouse_genomes_project 6 132137223 132152539 - MGP_LPJ_P0080146 Itfg2 protein_coding protein_coding MGP_LPJ_T0080147.1 MGP_LPJ_G0031225.1 mouse_genomes_project 6 132137277 132138154 - MGP_LPJ_P0080147 Itfg2 protein_coding protein_coding MGP_LPJ_T0080148.1 MGP_LPJ_G0031225.1 mouse_genomes_project 6 132137312 132152526 - MGP_LPJ_P0080148 Itfg2 protein_coding protein_coding MGP_LPJ_T0080149.1 MGP_LPJ_G0031225.1 mouse_genomes_project 6 132137985 132152477 - MGP_LPJ_P0080149 Itfg2 protein_coding protein_coding MGP_LPJ_T0080150.1 MGP_LPJ_G0031225.1 mouse_genomes_project 6 132138031 132138459 - Itfg2 protein_coding retained_intron MGP_LPJ_T0080151.1 MGP_LPJ_G0031225.1 mouse_genomes_project 6 132139359 132142525 - Itfg2 protein_coding retained_intron MGP_LPJ_T0080152.1 MGP_LPJ_G0031225.1 mouse_genomes_project 6 132140780 132152520 - MGP_LPJ_P0080152 Itfg2 protein_coding nonsense_mediated_decay MGP_LPJ_T0080153.1 MGP_LPJ_G0031225.1 mouse_genomes_project 6 132141413 132152521 - MGP_LPJ_P0080153 Itfg2 protein_coding nonsense_mediated_decay MGP_LPJ_T0080154.1 MGP_LPJ_G0031225.1 mouse_genomes_project 6 132143778 132152538 - Itfg2 protein_coding retained_intron MGP_LPJ_T0080155.1 MGP_LPJ_G0031225.1 mouse_genomes_project 6 132150696 132152526 - Itfg2 protein_coding retained_intron MGP_LPJ_T0008759.1 MGP_LPJ_G0007079.1 mouse_genomes_project 6 136307414 136308280 + Gm43974 lincRNA lincRNA MGP_LPJ_T0004966.1 MGP_LPJ_G0004263.1 mouse_genomes_project 6 40804586 40827323 - Gm44284 antisense antisense MGP_LPJ_T0077447.1 MGP_LPJ_G0030667.1 mouse_genomes_project 6 53995986 54018676 + MGP_LPJ_P0077447 Mturn protein_coding protein_coding MGP_LPJ_T0077448.1 MGP_LPJ_G0030667.1 mouse_genomes_project 6 53996116 54015967 + MGP_LPJ_P0077448 Mturn protein_coding protein_coding MGP_LPJ_T0077449.1 MGP_LPJ_G0030667.1 mouse_genomes_project 6 53996164 54003884 + Mturn protein_coding retained_intron MGP_LPJ_T0075951.1 MGP_LPJ_G0030330.1 mouse_genomes_project 6 730329 734875 + MGP_LPJ_P0075951 Gng11 protein_coding protein_coding MGP_LPJ_T0000321.1 MGP_LPJ_G0000259.1 mouse_genomes_project 6 68117381 68117785 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0079165.1 MGP_LPJ_G0031034.1 mouse_genomes_project 6 116266112 116280117 + MGP_LPJ_P0079165 Tatdn2 protein_coding protein_coding MGP_LPJ_T0079166.1 MGP_LPJ_G0031034.1 mouse_genomes_project 6 116266626 116279997 + MGP_LPJ_P0079166 Tatdn2 protein_coding protein_coding MGP_LPJ_T0079167.1 MGP_LPJ_G0031034.1 mouse_genomes_project 6 116266735 116279265 + MGP_LPJ_P0079167 Tatdn2 protein_coding protein_coding MGP_LPJ_T0079168.1 MGP_LPJ_G0031034.1 mouse_genomes_project 6 116273879 116280114 + MGP_LPJ_P0079168 Tatdn2 protein_coding protein_coding MGP_LPJ_T0079169.1 MGP_LPJ_G0031034.1 mouse_genomes_project 6 116276335 116279509 + MGP_LPJ_P0079169 Tatdn2 protein_coding protein_coding MGP_LPJ_T0011635.1 MGP_LPJ_G0009753.1 mouse_genomes_project 6 5342127 5342439 + Gm24059 misc_RNA misc_RNA MGP_LPJ_T0002027.1 MGP_LPJ_G0001937.1 mouse_genomes_project 6 61718176 61720755 + TEC TEC MGP_LPJ_T0079573.1 MGP_LPJ_G0031102.1 mouse_genomes_project 6 123344700 123365783 + Il17ra protein_coding retained_intron MGP_LPJ_T0079574.1 MGP_LPJ_G0031102.1 mouse_genomes_project 6 123344700 123370066 + MGP_LPJ_P0079574 Il17ra protein_coding protein_coding MGP_LPJ_T0079575.1 MGP_LPJ_G0031102.1 mouse_genomes_project 6 123355570 123362006 + Il17ra protein_coding processed_transcript MGP_LPJ_T0015243.1 MGP_LPJ_G0013334.1 mouse_genomes_project 6 31534982 31539171 - processed_pseudogene processed_pseudogene MGP_LPJ_T0077721.1 MGP_LPJ_G0030746.1 mouse_genomes_project 6 67490371 67492106 - MGP_LPJ_P0077721 Tacstd2 protein_coding protein_coding MGP_LPJ_T0076288.1 MGP_LPJ_G0030392.1 mouse_genomes_project 6 20919030 20922309 - MGP_LPJ_P0076288 Fezf1 protein_coding protein_coding MGP_LPJ_T0002009.1 MGP_LPJ_G0001919.1 mouse_genomes_project 6 46440563 46442146 + TEC TEC MGP_LPJ_T0001944.1 MGP_LPJ_G0001854.1 mouse_genomes_project 6 2071010 2072836 + TEC TEC MGP_LPJ_T0004923.1 MGP_LPJ_G0004230.1 mouse_genomes_project 6 2782493 2795924 - 1700019G24Rik antisense antisense MGP_LPJ_T0015486.1 MGP_LPJ_G0013577.1 mouse_genomes_project 6 111460684 111461162 + processed_pseudogene processed_pseudogene MGP_LPJ_T0078611.1 MGP_LPJ_G0030917.1 mouse_genomes_project 6 91130357 91163577 + MGP_LPJ_P0078611 Txnrd3 protein_coding protein_coding MGP_LPJ_T0078612.1 MGP_LPJ_G0030917.1 mouse_genomes_project 6 91130357 91163577 + MGP_LPJ_P0078612 Txnrd3 protein_coding protein_coding MGP_LPJ_T0002003.1 MGP_LPJ_G0001913.1 mouse_genomes_project 6 44820053 44822549 + TEC TEC MGP_LPJ_T0076043.1 MGP_LPJ_G0030349.1 mouse_genomes_project 6 4552184 4573206 - MGP_LPJ_P0076043 Asns protein_coding protein_coding MGP_LPJ_T0076044.1 MGP_LPJ_G0030349.1 mouse_genomes_project 6 4552184 4572823 - MGP_LPJ_P0076044 Asns protein_coding protein_coding MGP_LPJ_T0076045.1 MGP_LPJ_G0030349.1 mouse_genomes_project 6 4552485 4554401 - Asns protein_coding processed_transcript MGP_LPJ_T0076046.1 MGP_LPJ_G0030349.1 mouse_genomes_project 6 4558292 4560583 - Asns protein_coding retained_intron MGP_LPJ_T0076047.1 MGP_LPJ_G0030349.1 mouse_genomes_project 6 4560497 4573062 - MGP_LPJ_P0076047 Asns protein_coding protein_coding MGP_LPJ_T0076048.1 MGP_LPJ_G0030349.1 mouse_genomes_project 6 4565134 4572173 - MGP_LPJ_P0076048 Asns protein_coding protein_coding MGP_LPJ_T0076049.1 MGP_LPJ_G0030349.1 mouse_genomes_project 6 4565226 4572824 - MGP_LPJ_P0076049 Asns protein_coding protein_coding MGP_LPJ_T0079424.1 MGP_LPJ_G0031081.1 mouse_genomes_project 6 120874632 120898508 - Csgalnact2 protein_coding retained_intron MGP_LPJ_T0079425.1 MGP_LPJ_G0031081.1 mouse_genomes_project 6 120874632 120908588 - MGP_LPJ_P0079425 Csgalnact2 protein_coding protein_coding MGP_LPJ_T0079426.1 MGP_LPJ_G0031081.1 mouse_genomes_project 6 120876516 120895294 - MGP_LPJ_P0079426 Csgalnact2 protein_coding protein_coding MGP_LPJ_T0102244.1 MGP_LPJ_G0040281.1 mouse_genomes_project 6 82796555 82798830 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0079037.1 MGP_LPJ_G0031012.1 mouse_genomes_project 6 115709082 115738889 - MGP_LPJ_P0079037 Lhfpl4 protein_coding protein_coding MGP_LPJ_T0079038.1 MGP_LPJ_G0031012.1 mouse_genomes_project 6 115717019 115737443 - MGP_LPJ_P0079038 Lhfpl4 protein_coding protein_coding MGP_LPJ_T0076089.1 MGP_LPJ_G0030359.1 mouse_genomes_project 6 8869637 8876639 - MGP_LPJ_P0076089 Ndufa4 protein_coding protein_coding MGP_LPJ_T0076090.1 MGP_LPJ_G0030359.1 mouse_genomes_project 6 8869646 8876703 - Ndufa4 protein_coding retained_intron MGP_LPJ_T0004993.1 MGP_LPJ_G0004282.1 mouse_genomes_project 6 63118754 63121633 - antisense antisense MGP_LPJ_T0015186.1 MGP_LPJ_G0013277.1 mouse_genomes_project 6 3504901 3510126 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002077.1 MGP_LPJ_G0001987.1 mouse_genomes_project 6 87925321 87927497 + TEC TEC MGP_LPJ_T0077552.1 MGP_LPJ_G0030702.1 mouse_genomes_project 6 56879507 56880409 + MGP_LPJ_P0077552 protein_coding protein_coding MGP_LPJ_T0002106.1 MGP_LPJ_G0002016.1 mouse_genomes_project 6 92717540 92718134 - TEC TEC MGP_LPJ_T0080160.1 MGP_LPJ_G0031227.1 mouse_genomes_project 6 132216371 132266020 - MGP_LPJ_P0080160 Pzp protein_coding protein_coding MGP_LPJ_T0080161.1 MGP_LPJ_G0031227.1 mouse_genomes_project 6 132218075 132220361 - Pzp protein_coding processed_transcript MGP_LPJ_T0080162.1 MGP_LPJ_G0031227.1 mouse_genomes_project 6 132227551 132229427 - Pzp protein_coding retained_intron MGP_LPJ_T0080163.1 MGP_LPJ_G0031227.1 mouse_genomes_project 6 132259172 132266003 - MGP_LPJ_P0080163 Pzp protein_coding protein_coding MGP_LPJ_T0002146.1 MGP_LPJ_G0002056.1 mouse_genomes_project 6 115579943 115582054 - TEC TEC MGP_LPJ_T0008505.1 MGP_LPJ_G0006893.1 mouse_genomes_project 6 3082020 3122210 + Gm20619 lincRNA lincRNA MGP_LPJ_T0008506.1 MGP_LPJ_G0006893.1 mouse_genomes_project 6 3082048 3213571 + Gm20619 lincRNA lincRNA MGP_LPJ_T0008507.1 MGP_LPJ_G0006893.1 mouse_genomes_project 6 3082051 3228971 + Gm20619 lincRNA lincRNA MGP_LPJ_T0008508.1 MGP_LPJ_G0006893.1 mouse_genomes_project 6 3082079 3122206 + Gm20619 lincRNA lincRNA MGP_LPJ_T0008509.1 MGP_LPJ_G0006893.1 mouse_genomes_project 6 3144547 3213366 + Gm20619 lincRNA lincRNA MGP_LPJ_T0077390.1 MGP_LPJ_G0030657.1 mouse_genomes_project 6 52018515 52164330 - protein_coding processed_transcript MGP_LPJ_T0077391.1 MGP_LPJ_G0030657.1 mouse_genomes_project 6 52018515 52028028 - protein_coding processed_transcript MGP_LPJ_T0077392.1 MGP_LPJ_G0030657.1 mouse_genomes_project 6 52018515 52326136 - MGP_LPJ_P0077392 protein_coding protein_coding MGP_LPJ_T0015434.1 MGP_LPJ_G0013525.1 mouse_genomes_project 6 87199917 87217360 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015361.1 MGP_LPJ_G0013452.1 mouse_genomes_project 6 67161219 67161862 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002140.1 MGP_LPJ_G0002050.1 mouse_genomes_project 6 105800282 105802397 + TEC TEC MGP_LPJ_T0005034.1 MGP_LPJ_G0004309.1 mouse_genomes_project 6 87857173 87898059 + 1600020E01Rik antisense antisense MGP_LPJ_T0005035.1 MGP_LPJ_G0004309.1 mouse_genomes_project 6 87857173 87884186 + 1600020E01Rik antisense antisense MGP_LPJ_T0005036.1 MGP_LPJ_G0004309.1 mouse_genomes_project 6 87857199 87898059 + 1600020E01Rik antisense antisense MGP_LPJ_T0005037.1 MGP_LPJ_G0004309.1 mouse_genomes_project 6 87857738 87915684 + 1600020E01Rik antisense antisense MGP_LPJ_T0005038.1 MGP_LPJ_G0004309.1 mouse_genomes_project 6 87858247 87898059 + 1600020E01Rik antisense antisense MGP_LPJ_T0005039.1 MGP_LPJ_G0004309.1 mouse_genomes_project 6 87858329 87898058 + 1600020E01Rik antisense antisense MGP_LPJ_T0005040.1 MGP_LPJ_G0004309.1 mouse_genomes_project 6 87858402 87897073 + 1600020E01Rik antisense antisense MGP_LPJ_T0005041.1 MGP_LPJ_G0004309.1 mouse_genomes_project 6 87881148 87916114 + 1600020E01Rik antisense antisense MGP_LPJ_T0076525.1 MGP_LPJ_G0030440.1 mouse_genomes_project 6 28379630 28406615 - MGP_LPJ_P0076525 Zc3hc1 protein_coding protein_coding MGP_LPJ_T0076526.1 MGP_LPJ_G0030440.1 mouse_genomes_project 6 28379634 28406594 - MGP_LPJ_P0076526 Zc3hc1 protein_coding protein_coding MGP_LPJ_T0076527.1 MGP_LPJ_G0030440.1 mouse_genomes_project 6 28379638 28380469 - Zc3hc1 protein_coding retained_intron MGP_LPJ_T0076528.1 MGP_LPJ_G0030440.1 mouse_genomes_project 6 28379638 28406620 - MGP_LPJ_P0076528 Zc3hc1 protein_coding protein_coding MGP_LPJ_T0076529.1 MGP_LPJ_G0030440.1 mouse_genomes_project 6 28379724 28406602 - MGP_LPJ_P0076529 Zc3hc1 protein_coding protein_coding MGP_LPJ_T0076530.1 MGP_LPJ_G0030440.1 mouse_genomes_project 6 28383518 28386231 - Zc3hc1 protein_coding retained_intron MGP_LPJ_T0076531.1 MGP_LPJ_G0030440.1 mouse_genomes_project 6 28386172 28406598 - MGP_LPJ_P0076531 Zc3hc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0076532.1 MGP_LPJ_G0030440.1 mouse_genomes_project 6 28388073 28395915 - Zc3hc1 protein_coding processed_transcript MGP_LPJ_T0076533.1 MGP_LPJ_G0030440.1 mouse_genomes_project 6 28389253 28406581 - MGP_LPJ_P0076533 Zc3hc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0076534.1 MGP_LPJ_G0030440.1 mouse_genomes_project 6 28398574 28406602 - Zc3hc1 protein_coding retained_intron MGP_LPJ_T0076535.1 MGP_LPJ_G0030440.1 mouse_genomes_project 6 28402010 28406606 - Zc3hc1 protein_coding retained_intron MGP_LPJ_T0015531.1 MGP_LPJ_G0013622.1 mouse_genomes_project 6 124885629 124885761 - processed_pseudogene processed_pseudogene MGP_LPJ_T0080115.1 MGP_LPJ_G0031218.1 mouse_genomes_project 6 131945054 131992680 - MGP_LPJ_P0080115 Tead4 protein_coding protein_coding MGP_LPJ_T0080116.1 MGP_LPJ_G0031218.1 mouse_genomes_project 6 131987704 132019136 - MGP_LPJ_P0080116 Tead4 protein_coding protein_coding MGP_LPJ_T0080117.1 MGP_LPJ_G0031218.1 mouse_genomes_project 6 131987754 132019051 - MGP_LPJ_P0080117 Tead4 protein_coding protein_coding MGP_LPJ_T0077086.1 MGP_LPJ_G0030584.1 mouse_genomes_project 6 46250754 46295624 + MGP_LPJ_P0077086 Cul1 protein_coding protein_coding MGP_LPJ_T0077087.1 MGP_LPJ_G0030584.1 mouse_genomes_project 6 46250848 46282383 + MGP_LPJ_P0077087 Cul1 protein_coding protein_coding MGP_LPJ_T0077088.1 MGP_LPJ_G0030584.1 mouse_genomes_project 6 46251260 46323387 + MGP_LPJ_P0077088 Cul1 protein_coding protein_coding MGP_LPJ_T0077089.1 MGP_LPJ_G0030584.1 mouse_genomes_project 6 46251676 46325760 + MGP_LPJ_P0077089 Cul1 protein_coding protein_coding MGP_LPJ_T0077090.1 MGP_LPJ_G0030584.1 mouse_genomes_project 6 46251744 46282595 + MGP_LPJ_P0077090 Cul1 protein_coding protein_coding MGP_LPJ_T0077091.1 MGP_LPJ_G0030584.1 mouse_genomes_project 6 46314431 46325679 + Cul1 protein_coding processed_transcript MGP_LPJ_T0077092.1 MGP_LPJ_G0030584.1 mouse_genomes_project 6 46316614 46319402 + Cul1 protein_coding retained_intron MGP_LPJ_T0077093.1 MGP_LPJ_G0030584.1 mouse_genomes_project 6 46319318 46322902 + Cul1 protein_coding retained_intron MGP_LPJ_T0077094.1 MGP_LPJ_G0030584.1 mouse_genomes_project 6 46323184 46325400 + Cul1 protein_coding processed_transcript MGP_LPJ_T0079227.1 MGP_LPJ_G0031043.1 mouse_genomes_project 6 117622208 117656904 - MGP_LPJ_P0079227 Tamm41 protein_coding protein_coding MGP_LPJ_T0079228.1 MGP_LPJ_G0031043.1 mouse_genomes_project 6 117622215 117630345 - Tamm41 protein_coding retained_intron MGP_LPJ_T0079229.1 MGP_LPJ_G0031043.1 mouse_genomes_project 6 117626000 117634183 - Tamm41 protein_coding retained_intron MGP_LPJ_T0079230.1 MGP_LPJ_G0031043.1 mouse_genomes_project 6 117628652 117651292 - MGP_LPJ_P0079230 Tamm41 protein_coding nonsense_mediated_decay MGP_LPJ_T0079231.1 MGP_LPJ_G0031043.1 mouse_genomes_project 6 117630024 117656883 - MGP_LPJ_P0079231 Tamm41 protein_coding protein_coding MGP_LPJ_T0079232.1 MGP_LPJ_G0031043.1 mouse_genomes_project 6 117634010 117656853 - MGP_LPJ_P0079232 Tamm41 protein_coding nonsense_mediated_decay MGP_LPJ_T0079233.1 MGP_LPJ_G0031043.1 mouse_genomes_project 6 117643748 117656904 - Tamm41 protein_coding retained_intron MGP_LPJ_T0079234.1 MGP_LPJ_G0031043.1 mouse_genomes_project 6 117650305 117651293 - Tamm41 protein_coding processed_transcript MGP_LPJ_T0078052.1 MGP_LPJ_G0030818.1 mouse_genomes_project 6 84115005 84118408 + MGP_LPJ_P0078052 Mogs protein_coding protein_coding MGP_LPJ_T0078053.1 MGP_LPJ_G0030818.1 mouse_genomes_project 6 84116025 84116861 + Mogs protein_coding retained_intron MGP_LPJ_T0098654.1 MGP_LPJ_G0036924.1 mouse_genomes_project 6 92315945 92316260 - sense_intronic sense_intronic MGP_LPJ_T0080055.1 MGP_LPJ_G0031204.1 mouse_genomes_project 6 130405608 130436629 - MGP_LPJ_P0080055 Ndufa9 protein_coding protein_coding MGP_LPJ_T0080056.1 MGP_LPJ_G0031204.1 mouse_genomes_project 6 130405883 130436629 - MGP_LPJ_P0080056 Ndufa9 protein_coding protein_coding MGP_LPJ_T0080057.1 MGP_LPJ_G0031204.1 mouse_genomes_project 6 130431245 130436640 - Ndufa9 protein_coding retained_intron MGP_LPJ_T0008527.1 MGP_LPJ_G0006905.1 mouse_genomes_project 6 13826474 13858066 + Gm43998 lincRNA lincRNA MGP_LPJ_T0011684.1 MGP_LPJ_G0009802.1 mouse_genomes_project 6 131484346 131484645 + Gm23098 misc_RNA misc_RNA MGP_LPJ_T0077351.1 MGP_LPJ_G0030646.1 mouse_genomes_project 6 51409674 51411612 - MGP_LPJ_P0077351 Hoxa4 protein_coding protein_coding MGP_LPJ_T0077346.1 MGP_LPJ_G0030643.1 mouse_genomes_project 6 51383543 51433224 - MGP_LPJ_P0077346 Gm28308 protein_coding protein_coding MGP_LPJ_T0078927.1 MGP_LPJ_G0030992.1 mouse_genomes_project 6 107963939 108124187 + Cntn4 protein_coding processed_transcript MGP_LPJ_T0078928.1 MGP_LPJ_G0030992.1 mouse_genomes_project 6 107964024 109000074 + MGP_LPJ_P0078928 Cntn4 protein_coding protein_coding MGP_LPJ_T0078929.1 MGP_LPJ_G0030992.1 mouse_genomes_project 6 107964024 109024997 + MGP_LPJ_P0078929 Cntn4 protein_coding protein_coding MGP_LPJ_T0078930.1 MGP_LPJ_G0030992.1 mouse_genomes_project 6 107964054 109025002 + MGP_LPJ_P0078930 Cntn4 protein_coding protein_coding MGP_LPJ_T0078931.1 MGP_LPJ_G0030992.1 mouse_genomes_project 6 108222886 109000080 + MGP_LPJ_P0078931 Cntn4 protein_coding protein_coding MGP_LPJ_T0078932.1 MGP_LPJ_G0030992.1 mouse_genomes_project 6 108424270 108941510 + MGP_LPJ_P0078932 Cntn4 protein_coding protein_coding MGP_LPJ_T0078933.1 MGP_LPJ_G0030992.1 mouse_genomes_project 6 108424423 108847349 + Cntn4 protein_coding processed_transcript MGP_LPJ_T0078934.1 MGP_LPJ_G0030992.1 mouse_genomes_project 6 108424511 108999297 + MGP_LPJ_P0078934 Cntn4 protein_coding protein_coding MGP_LPJ_T0078935.1 MGP_LPJ_G0030992.1 mouse_genomes_project 6 108424560 108662553 + Cntn4 protein_coding processed_transcript MGP_LPJ_T0078936.1 MGP_LPJ_G0030992.1 mouse_genomes_project 6 108835634 109023300 + Cntn4 protein_coding processed_transcript MGP_LPJ_T0078937.1 MGP_LPJ_G0030992.1 mouse_genomes_project 6 108981478 109024884 + Cntn4 protein_coding processed_transcript MGP_LPJ_T0078938.1 MGP_LPJ_G0030992.1 mouse_genomes_project 6 109004930 109005905 + Cntn4 protein_coding retained_intron MGP_LPJ_T0078939.1 MGP_LPJ_G0030992.1 mouse_genomes_project 6 109019848 109023444 + Cntn4 protein_coding processed_transcript MGP_LPJ_T0015536.1 MGP_LPJ_G0013627.1 mouse_genomes_project 6 125535129 125535368 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002025.1 MGP_LPJ_G0001935.1 mouse_genomes_project 6 58533914 58536009 + TEC TEC MGP_LPJ_T0015553.1 MGP_LPJ_G0013644.1 mouse_genomes_project 6 130521252 130522152 + processed_pseudogene processed_pseudogene MGP_LPJ_T0077535.1 MGP_LPJ_G0030687.1 mouse_genomes_project 6 56313978 56318373 + Vmn1r4 protein_coding retained_intron MGP_LPJ_T0077536.1 MGP_LPJ_G0030687.1 mouse_genomes_project 6 56313985 56380011 + MGP_LPJ_P0077536 Vmn1r4 protein_coding protein_coding MGP_LPJ_T0077537.1 MGP_LPJ_G0030687.1 mouse_genomes_project 6 56350312 56351346 + MGP_LPJ_P0077537 Vmn1r4 protein_coding protein_coding MGP_LPJ_T0015442.1 MGP_LPJ_G0013533.1 mouse_genomes_project 6 92995575 92997414 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000244.1 MGP_LPJ_G0000183.1 mouse_genomes_project 6 70851799 70963622 + MGP_LPJ_P0000244 Igkv3-9 IG_V_gene IG_V_gene MGP_LPJ_T0079645.1 MGP_LPJ_G0031116.1 mouse_genomes_project 6 124308909 124410951 - MGP_LPJ_P0079645 Iqsec3 protein_coding nonsense_mediated_decay MGP_LPJ_T0079646.1 MGP_LPJ_G0031116.1 mouse_genomes_project 6 124308909 124410909 - MGP_LPJ_P0079646 Iqsec3 protein_coding nonsense_mediated_decay MGP_LPJ_T0079647.1 MGP_LPJ_G0031116.1 mouse_genomes_project 6 124308909 124410964 - MGP_LPJ_P0079647 Iqsec3 protein_coding protein_coding MGP_LPJ_T0079648.1 MGP_LPJ_G0031116.1 mouse_genomes_project 6 124315822 124410849 - MGP_LPJ_P0079648 Iqsec3 protein_coding unknown_likely_coding MGP_LPJ_T0079649.1 MGP_LPJ_G0031116.1 mouse_genomes_project 6 124339990 124410964 - MGP_LPJ_P0079649 Iqsec3 protein_coding protein_coding MGP_LPJ_T0000338.1 MGP_LPJ_G0000276.1 mouse_genomes_project 6 68958067 68958470 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0078618.1 MGP_LPJ_G0030923.1 mouse_genomes_project 6 91385945 91499869 - MGP_LPJ_P0078618 Vmn1r45 protein_coding protein_coding MGP_LPJ_T0076069.1 MGP_LPJ_G0030356.1 mouse_genomes_project 6 5416120 5508620 + MGP_LPJ_P0076069 Glcci1 protein_coding protein_coding MGP_LPJ_T0076070.1 MGP_LPJ_G0030356.1 mouse_genomes_project 6 5417457 5489761 + MGP_LPJ_P0076070 Glcci1 protein_coding protein_coding MGP_LPJ_T0076071.1 MGP_LPJ_G0030356.1 mouse_genomes_project 6 5425735 5504693 + MGP_LPJ_P0076071 Glcci1 protein_coding protein_coding MGP_LPJ_T0076072.1 MGP_LPJ_G0030356.1 mouse_genomes_project 6 5451363 5505141 + MGP_LPJ_P0076072 Glcci1 protein_coding protein_coding MGP_LPJ_T0076073.1 MGP_LPJ_G0030356.1 mouse_genomes_project 6 5489818 5502702 + Glcci1 protein_coding processed_transcript MGP_LPJ_T0078632.1 MGP_LPJ_G0030933.1 mouse_genomes_project 6 91810735 91830814 - MGP_LPJ_P0078632 Chst13 protein_coding protein_coding MGP_LPJ_T0001994.1 MGP_LPJ_G0001904.1 mouse_genomes_project 6 44008065 44009328 + TEC TEC MGP_LPJ_T0002017.1 MGP_LPJ_G0001927.1 mouse_genomes_project 6 52934474 52936679 + TEC TEC MGP_LPJ_T0078147.1 MGP_LPJ_G0030834.1 mouse_genomes_project 6 84700915 84707571 - MGP_LPJ_P0078147 Cd207 protein_coding protein_coding MGP_LPJ_T0079756.1 MGP_LPJ_G0031149.1 mouse_genomes_project 6 127807122 127816551 - MGP_LPJ_P0079756 1700013D24Rik protein_coding protein_coding MGP_LPJ_T0079757.1 MGP_LPJ_G0031149.1 mouse_genomes_project 6 127807127 127816534 - 1700013D24Rik protein_coding lincRNA MGP_LPJ_T0015600.1 MGP_LPJ_G0013691.1 mouse_genomes_project 6 139234499 139234908 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015568.1 MGP_LPJ_G0013659.1 mouse_genomes_project 6 132733227 132733927 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015436.1 MGP_LPJ_G0013527.1 mouse_genomes_project 6 87592859 87593867 + processed_pseudogene processed_pseudogene MGP_LPJ_T0076446.1 MGP_LPJ_G0030431.1 mouse_genomes_project 6 27402207 27414645 - Kcp protein_coding retained_intron MGP_LPJ_T0076447.1 MGP_LPJ_G0030431.1 mouse_genomes_project 6 27412536 27415361 - MGP_LPJ_P0076447 Kcp protein_coding nonsense_mediated_decay MGP_LPJ_T0076448.1 MGP_LPJ_G0030431.1 mouse_genomes_project 6 27412536 27439686 - MGP_LPJ_P0076448 Kcp protein_coding nonsense_mediated_decay MGP_LPJ_T0076449.1 MGP_LPJ_G0030431.1 mouse_genomes_project 6 27412536 27427662 - MGP_LPJ_P0076449 Kcp protein_coding nonsense_mediated_decay MGP_LPJ_T0076450.1 MGP_LPJ_G0030431.1 mouse_genomes_project 6 27412537 27439701 - MGP_LPJ_P0076450 Kcp protein_coding protein_coding MGP_LPJ_T0076451.1 MGP_LPJ_G0030431.1 mouse_genomes_project 6 27412537 27439699 - MGP_LPJ_P0076451 Kcp protein_coding protein_coding MGP_LPJ_T0076452.1 MGP_LPJ_G0030431.1 mouse_genomes_project 6 27412745 27439675 - MGP_LPJ_P0076452 Kcp protein_coding unknown_likely_coding MGP_LPJ_T0076453.1 MGP_LPJ_G0030431.1 mouse_genomes_project 6 27414193 27415473 - Kcp protein_coding retained_intron MGP_LPJ_T0076454.1 MGP_LPJ_G0030431.1 mouse_genomes_project 6 27428592 27430356 - Kcp protein_coding retained_intron MGP_LPJ_T0076455.1 MGP_LPJ_G0030431.1 mouse_genomes_project 6 27429677 27434573 - MGP_LPJ_P0076455 Kcp protein_coding nonsense_mediated_decay MGP_LPJ_T0076456.1 MGP_LPJ_G0030431.1 mouse_genomes_project 6 27434038 27439701 - MGP_LPJ_P0076456 Kcp protein_coding nonsense_mediated_decay MGP_LPJ_T0078627.1 MGP_LPJ_G0030929.1 mouse_genomes_project 6 91579457 91587796 + MGP_LPJ_P0078627 Vmn1r51 protein_coding protein_coding MGP_LPJ_T0015397.1 MGP_LPJ_G0013488.1 mouse_genomes_project 6 74030484 74030908 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010833.1 MGP_LPJ_G0008951.1 mouse_genomes_project 6 128733684 128733813 - Mir8113 miRNA miRNA MGP_LPJ_T0076741.1 MGP_LPJ_G0030475.1 mouse_genomes_project 6 33513809 33557340 - MGP_LPJ_P0076741 Slc13a4 protein_coding protein_coding MGP_LPJ_T0076742.1 MGP_LPJ_G0030475.1 mouse_genomes_project 6 33528354 33537350 - Slc13a4 protein_coding retained_intron MGP_LPJ_T0076743.1 MGP_LPJ_G0030475.1 mouse_genomes_project 6 33534610 33557338 - Slc13a4 protein_coding retained_intron MGP_LPJ_T0005009.1 MGP_LPJ_G0004295.1 mouse_genomes_project 6 83637299 83660835 + antisense antisense MGP_LPJ_T0008662.1 MGP_LPJ_G0007003.1 mouse_genomes_project 6 83858551 83862541 - 2310069B03Rik lincRNA lincRNA MGP_LPJ_T0008663.1 MGP_LPJ_G0007003.1 mouse_genomes_project 6 83859214 83862541 - 2310069B03Rik lincRNA lincRNA MGP_LPJ_T0008664.1 MGP_LPJ_G0007003.1 mouse_genomes_project 6 83860108 83862520 - 2310069B03Rik lincRNA lincRNA MGP_LPJ_T0015183.1 MGP_LPJ_G0013274.1 mouse_genomes_project 6 1595243 1595415 + processed_pseudogene processed_pseudogene MGP_LPJ_T0080784.1 MGP_LPJ_G0031394.1 mouse_genomes_project 6 151763010 151770915 + Med21 protein_coding processed_transcript MGP_LPJ_T0080785.1 MGP_LPJ_G0031394.1 mouse_genomes_project 6 151763010 151770915 + MGP_LPJ_P0080785 Med21 protein_coding protein_coding MGP_LPJ_T0080786.1 MGP_LPJ_G0031394.1 mouse_genomes_project 6 151763042 151764441 + Med21 protein_coding retained_intron MGP_LPJ_T0080787.1 MGP_LPJ_G0031394.1 mouse_genomes_project 6 151763043 151769846 + MGP_LPJ_P0080787 Med21 protein_coding protein_coding MGP_LPJ_T0080788.1 MGP_LPJ_G0031394.1 mouse_genomes_project 6 151763044 151770915 + Med21 protein_coding processed_transcript MGP_LPJ_T0080789.1 MGP_LPJ_G0031394.1 mouse_genomes_project 6 151763054 151771045 + MGP_LPJ_P0080789 Med21 protein_coding nonsense_mediated_decay MGP_LPJ_T0080790.1 MGP_LPJ_G0031394.1 mouse_genomes_project 6 151767691 151770915 + Med21 protein_coding retained_intron MGP_LPJ_T0002032.1 MGP_LPJ_G0001942.1 mouse_genomes_project 6 71869540 71872326 - TEC TEC MGP_LPJ_T0079554.1 MGP_LPJ_G0031100.1 mouse_genomes_project 6 123194572 123232729 - MGP_LPJ_P0079554 Ccdc77 protein_coding protein_coding MGP_LPJ_T0079555.1 MGP_LPJ_G0031100.1 mouse_genomes_project 6 123194572 123240489 - MGP_LPJ_P0079555 Ccdc77 protein_coding nonsense_mediated_decay MGP_LPJ_T0079556.1 MGP_LPJ_G0031100.1 mouse_genomes_project 6 123195284 123232772 - MGP_LPJ_P0079556 Ccdc77 protein_coding protein_coding MGP_LPJ_T0079557.1 MGP_LPJ_G0031100.1 mouse_genomes_project 6 123202515 123232710 - MGP_LPJ_P0079557 Ccdc77 protein_coding nonsense_mediated_decay MGP_LPJ_T0079558.1 MGP_LPJ_G0031100.1 mouse_genomes_project 6 123205482 123232667 - MGP_LPJ_P0079558 Ccdc77 protein_coding protein_coding MGP_LPJ_T0079559.1 MGP_LPJ_G0031100.1 mouse_genomes_project 6 123205515 123232640 - MGP_LPJ_P0079559 Ccdc77 protein_coding nonsense_mediated_decay MGP_LPJ_T0079560.1 MGP_LPJ_G0031100.1 mouse_genomes_project 6 123209431 123232677 - Ccdc77 protein_coding retained_intron MGP_LPJ_T0079561.1 MGP_LPJ_G0031100.1 mouse_genomes_project 6 123216961 123224077 - Ccdc77 protein_coding retained_intron MGP_LPJ_T0079562.1 MGP_LPJ_G0031100.1 mouse_genomes_project 6 123223894 123240471 - MGP_LPJ_P0079562 Ccdc77 protein_coding protein_coding MGP_LPJ_T0079563.1 MGP_LPJ_G0031100.1 mouse_genomes_project 6 123229056 123232667 - Ccdc77 protein_coding retained_intron MGP_LPJ_T0000319.1 MGP_LPJ_G0000257.1 mouse_genomes_project 6 68082329 68082789 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0076174.1 MGP_LPJ_G0030374.1 mouse_genomes_project 6 14634666 14670556 + MGP_LPJ_P0076174 Cav1 protein_coding protein_coding MGP_LPJ_T0076175.1 MGP_LPJ_G0030374.1 mouse_genomes_project 6 14634676 14669661 + MGP_LPJ_P0076175 Cav1 protein_coding protein_coding MGP_LPJ_T0076176.1 MGP_LPJ_G0030374.1 mouse_genomes_project 6 14634741 14668528 + MGP_LPJ_P0076176 Cav1 protein_coding protein_coding MGP_LPJ_T0076177.1 MGP_LPJ_G0030374.1 mouse_genomes_project 6 14634742 14656573 + Cav1 protein_coding processed_transcript MGP_LPJ_T0076178.1 MGP_LPJ_G0030374.1 mouse_genomes_project 6 14634742 14668583 + MGP_LPJ_P0076178 Cav1 protein_coding nonsense_mediated_decay MGP_LPJ_T0076179.1 MGP_LPJ_G0030374.1 mouse_genomes_project 6 14634754 14636527 + MGP_LPJ_P0076179 Cav1 protein_coding protein_coding MGP_LPJ_T0076180.1 MGP_LPJ_G0030374.1 mouse_genomes_project 6 14635371 14668385 + MGP_LPJ_P0076180 Cav1 protein_coding protein_coding MGP_LPJ_T0076181.1 MGP_LPJ_G0030374.1 mouse_genomes_project 6 14635601 14668751 + MGP_LPJ_P0076181 Cav1 protein_coding protein_coding MGP_LPJ_T0076182.1 MGP_LPJ_G0030374.1 mouse_genomes_project 6 14635963 14670684 + MGP_LPJ_P0076182 Cav1 protein_coding protein_coding MGP_LPJ_T0076183.1 MGP_LPJ_G0030374.1 mouse_genomes_project 6 14636046 14656564 + Cav1 protein_coding processed_transcript MGP_LPJ_T0076967.1 MGP_LPJ_G0030540.1 mouse_genomes_project 6 40356741 40361272 + MGP_LPJ_P0076967 Pip protein_coding protein_coding MGP_LPJ_T0076968.1 MGP_LPJ_G0030540.1 mouse_genomes_project 6 40356774 40361164 + MGP_LPJ_P0076968 Pip protein_coding protein_coding MGP_LPJ_T0076969.1 MGP_LPJ_G0030540.1 mouse_genomes_project 6 40356791 40360791 + MGP_LPJ_P0076969 Pip protein_coding protein_coding MGP_LPJ_T0015290.1 MGP_LPJ_G0013381.1 mouse_genomes_project 6 47958615 47961045 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100893.1 MGP_LPJ_G0039156.1 mouse_genomes_project 6 58664386 58664518 + Gm22367 snoRNA snoRNA MGP_LPJ_T0076922.1 MGP_LPJ_G0030518.1 mouse_genomes_project 6 39037600 39038661 + MGP_LPJ_P0076922 Olfr460 protein_coding protein_coding MGP_LPJ_T0077081.1 MGP_LPJ_G0030583.1 mouse_genomes_project 6 43758233 46095568 + MGP_LPJ_P0077081 Cntnap2 protein_coding protein_coding MGP_LPJ_T0077082.1 MGP_LPJ_G0030583.1 mouse_genomes_project 6 44917141 45160981 + Cntnap2 protein_coding processed_transcript MGP_LPJ_T0077083.1 MGP_LPJ_G0030583.1 mouse_genomes_project 6 45772475 45860930 + MGP_LPJ_P0077083 Cntnap2 protein_coding protein_coding MGP_LPJ_T0077084.1 MGP_LPJ_G0030583.1 mouse_genomes_project 6 46030739 46095564 + MGP_LPJ_P0077084 Cntnap2 protein_coding protein_coding MGP_LPJ_T0077085.1 MGP_LPJ_G0030583.1 mouse_genomes_project 6 46030805 46088522 + MGP_LPJ_P0077085 Cntnap2 protein_coding protein_coding MGP_LPJ_T0002048.1 MGP_LPJ_G0001958.1 mouse_genomes_project 6 78086748 78088932 - TEC TEC MGP_LPJ_T0010768.1 MGP_LPJ_G0008886.1 mouse_genomes_project 6 17025582 17025702 + Mir6370 miRNA miRNA MGP_LPJ_T0015610.1 MGP_LPJ_G0013701.1 mouse_genomes_project 6 144851901 144852313 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010787.1 MGP_LPJ_G0008905.1 mouse_genomes_project 6 49650300 49650411 + Mir6371 miRNA miRNA MGP_LPJ_T0078283.1 MGP_LPJ_G0030859.1 mouse_genomes_project 6 86996683 86997369 - MGP_LPJ_P0078283 protein_coding protein_coding MGP_LPJ_T0002050.1 MGP_LPJ_G0001960.1 mouse_genomes_project 6 78139034 78143866 - TEC TEC MGP_LPJ_T0102272.1 MGP_LPJ_G0040309.1 mouse_genomes_project 6 136701515 136712495 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0079842.1 MGP_LPJ_G0031166.1 mouse_genomes_project 6 128285576 128287542 + MGP_LPJ_P0079842 Spsb2 protein_coding protein_coding MGP_LPJ_T0079843.1 MGP_LPJ_G0031166.1 mouse_genomes_project 6 128285800 128287252 + MGP_LPJ_P0079843 Spsb2 protein_coding protein_coding MGP_LPJ_T0079844.1 MGP_LPJ_G0031166.1 mouse_genomes_project 6 128285821 128287542 + MGP_LPJ_P0079844 Spsb2 protein_coding protein_coding MGP_LPJ_T0079845.1 MGP_LPJ_G0031166.1 mouse_genomes_project 6 128285834 128286854 + MGP_LPJ_P0079845 Spsb2 protein_coding protein_coding MGP_LPJ_T0079846.1 MGP_LPJ_G0031166.1 mouse_genomes_project 6 128286213 128287542 + MGP_LPJ_P0079846 Spsb2 protein_coding protein_coding MGP_LPJ_T0080748.1 MGP_LPJ_G0031389.1 mouse_genomes_project 6 151061378 151101286 + MGP_LPJ_P0080748 Sspn protein_coding protein_coding MGP_LPJ_T0080749.1 MGP_LPJ_G0031389.1 mouse_genomes_project 6 151070081 151101286 + MGP_LPJ_P0080749 Sspn protein_coding protein_coding MGP_LPJ_T0080750.1 MGP_LPJ_G0031389.1 mouse_genomes_project 6 151089458 151101286 + MGP_LPJ_P0080750 Sspn protein_coding protein_coding MGP_LPJ_T0080286.1 MGP_LPJ_G0031274.1 mouse_genomes_project 6 135795385 135802316 + MGP_LPJ_P0080286 protein_coding protein_coding MGP_LPJ_T0079772.1 MGP_LPJ_G0031152.1 mouse_genomes_project 6 127960148 128035992 + MGP_LPJ_P0079772 C1rl protein_coding protein_coding MGP_LPJ_T0077564.1 MGP_LPJ_G0030706.1 mouse_genomes_project 6 57157736 57198466 + MGP_LPJ_P0077564 Lancl2 protein_coding protein_coding MGP_LPJ_T0077565.1 MGP_LPJ_G0030706.1 mouse_genomes_project 6 57157832 57197503 + MGP_LPJ_P0077565 Lancl2 protein_coding protein_coding MGP_LPJ_T0077566.1 MGP_LPJ_G0030706.1 mouse_genomes_project 6 57158283 57198465 + MGP_LPJ_P0077566 Lancl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0015299.1 MGP_LPJ_G0013390.1 mouse_genomes_project 6 48883200 48885526 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000209.1 MGP_LPJ_G0000158.1 mouse_genomes_project 6 69929228 69929817 - MGP_LPJ_P0000209 IG_V_gene IG_V_gene MGP_LPJ_T0077025.1 MGP_LPJ_G0030557.1 mouse_genomes_project 6 40951823 40982900 - MGP_LPJ_P0077025 Olfr458 protein_coding protein_coding MGP_LPJ_T0077059.1 MGP_LPJ_G0030576.1 mouse_genomes_project 6 41743892 41744946 + MGP_LPJ_P0077059 Olfr13 protein_coding protein_coding MGP_LPJ_T0078232.1 MGP_LPJ_G0030848.1 mouse_genomes_project 6 86354767 86485828 - MGP_LPJ_P0078232 Sfxn5 protein_coding protein_coding MGP_LPJ_T0078233.1 MGP_LPJ_G0030848.1 mouse_genomes_project 6 86371017 86406605 - Sfxn5 protein_coding processed_transcript MGP_LPJ_T0078234.1 MGP_LPJ_G0030848.1 mouse_genomes_project 6 86376089 86485825 - MGP_LPJ_P0078234 Sfxn5 protein_coding protein_coding MGP_LPJ_T0078235.1 MGP_LPJ_G0030848.1 mouse_genomes_project 6 86410385 86485812 - Sfxn5 protein_coding retained_intron MGP_LPJ_T0078236.1 MGP_LPJ_G0030848.1 mouse_genomes_project 6 86438064 86485825 - Sfxn5 protein_coding processed_transcript MGP_LPJ_T0078237.1 MGP_LPJ_G0030848.1 mouse_genomes_project 6 86444771 86485828 - MGP_LPJ_P0078237 Sfxn5 protein_coding protein_coding MGP_LPJ_T0078238.1 MGP_LPJ_G0030848.1 mouse_genomes_project 6 86444773 86471199 - Sfxn5 protein_coding processed_transcript MGP_LPJ_T0078239.1 MGP_LPJ_G0030848.1 mouse_genomes_project 6 86469672 86485156 - MGP_LPJ_P0078239 Sfxn5 protein_coding protein_coding MGP_LPJ_T0078240.1 MGP_LPJ_G0030848.1 mouse_genomes_project 6 86481349 86485828 - Sfxn5 protein_coding retained_intron MGP_LPJ_T0000192.1 MGP_LPJ_G0000142.1 mouse_genomes_project 6 68944699 68945210 - MGP_LPJ_P0000192 Gm42543 IG_V_gene IG_V_gene MGP_LPJ_T0015581.1 MGP_LPJ_G0013672.1 mouse_genomes_project 6 135534094 135534831 - processed_pseudogene processed_pseudogene MGP_LPJ_T0078918.1 MGP_LPJ_G0030990.1 mouse_genomes_project 6 105705345 105952656 + MGP_LPJ_P0078918 Chl1 protein_coding protein_coding MGP_LPJ_T0078919.1 MGP_LPJ_G0030990.1 mouse_genomes_project 6 105705721 105840416 + Chl1 protein_coding retained_intron MGP_LPJ_T0078920.1 MGP_LPJ_G0030990.1 mouse_genomes_project 6 105705827 105931208 + MGP_LPJ_P0078920 Chl1 protein_coding protein_coding MGP_LPJ_T0078921.1 MGP_LPJ_G0030990.1 mouse_genomes_project 6 105705933 105927636 + MGP_LPJ_P0078921 Chl1 protein_coding protein_coding MGP_LPJ_T0078922.1 MGP_LPJ_G0030990.1 mouse_genomes_project 6 105706089 105863198 + MGP_LPJ_P0078922 Chl1 protein_coding protein_coding MGP_LPJ_T0078923.1 MGP_LPJ_G0030990.1 mouse_genomes_project 6 105901356 105927994 + MGP_LPJ_P0078923 Chl1 protein_coding protein_coding MGP_LPJ_T0078697.1 MGP_LPJ_G0030944.1 mouse_genomes_project 6 92911988 92960138 - MGP_LPJ_P0078697 Wnt7a protein_coding protein_coding MGP_LPJ_T0078698.1 MGP_LPJ_G0030944.1 mouse_genomes_project 6 92911990 92913105 - Wnt7a protein_coding processed_transcript MGP_LPJ_T0078699.1 MGP_LPJ_G0030944.1 mouse_genomes_project 6 92911992 92913079 - Wnt7a protein_coding processed_transcript MGP_LPJ_T0008618.1 MGP_LPJ_G0006965.1 mouse_genomes_project 6 51720192 51727842 + 1700094M24Rik lincRNA lincRNA MGP_LPJ_T0099686.1 MGP_LPJ_G0037949.1 mouse_genomes_project 6 140764323 140764513 + Gm26105 snRNA snRNA MGP_LPJ_T0078510.1 MGP_LPJ_G0030904.1 mouse_genomes_project 6 89643283 89644273 + MGP_LPJ_P0078510 Dnajb8 protein_coding protein_coding MGP_LPJ_T0078511.1 MGP_LPJ_G0030904.1 mouse_genomes_project 6 89643900 89680332 + MGP_LPJ_P0078511 Dnajb8 protein_coding nonsense_mediated_decay MGP_LPJ_T0080074.1 MGP_LPJ_G0031208.1 mouse_genomes_project 6 130532276 130560299 + D6Wsu163e protein_coding retained_intron MGP_LPJ_T0080075.1 MGP_LPJ_G0031208.1 mouse_genomes_project 6 130532280 130566595 + MGP_LPJ_P0080075 D6Wsu163e protein_coding protein_coding MGP_LPJ_T0080076.1 MGP_LPJ_G0031208.1 mouse_genomes_project 6 130532285 130534944 + D6Wsu163e protein_coding retained_intron MGP_LPJ_T0080077.1 MGP_LPJ_G0031208.1 mouse_genomes_project 6 130532289 130539812 + D6Wsu163e protein_coding retained_intron MGP_LPJ_T0080078.1 MGP_LPJ_G0031208.1 mouse_genomes_project 6 130532343 130537133 + MGP_LPJ_P0080078 D6Wsu163e protein_coding protein_coding MGP_LPJ_T0080079.1 MGP_LPJ_G0031208.1 mouse_genomes_project 6 130542606 130547409 + D6Wsu163e protein_coding retained_intron MGP_LPJ_T0080080.1 MGP_LPJ_G0031208.1 mouse_genomes_project 6 130565051 130566246 + D6Wsu163e protein_coding retained_intron MGP_LPJ_T0008704.1 MGP_LPJ_G0007033.1 mouse_genomes_project 6 101991360 102016579 - Gm44290 lincRNA lincRNA MGP_LPJ_T0077029.1 MGP_LPJ_G0030560.1 mouse_genomes_project 6 41039599 41040553 - MGP_LPJ_P0077029 Olfr455 protein_coding protein_coding MGP_LPJ_T0002100.1 MGP_LPJ_G0002010.1 mouse_genomes_project 6 90239531 90243296 + TEC TEC MGP_LPJ_T0010799.1 MGP_LPJ_G0008917.1 mouse_genomes_project 6 84047292 84047355 + Mir7040 miRNA miRNA MGP_LPJ_T0011647.1 MGP_LPJ_G0009765.1 mouse_genomes_project 6 28130723 28131050 - Gm25580 misc_RNA misc_RNA MGP_LPJ_T0002031.1 MGP_LPJ_G0001941.1 mouse_genomes_project 6 71835489 71838493 - TEC TEC MGP_LPJ_T0004938.1 MGP_LPJ_G0004239.1 mouse_genomes_project 6 19414562 19415628 + Gm42582 antisense antisense MGP_LPJ_T0008520.1 MGP_LPJ_G0006901.1 mouse_genomes_project 6 7955805 7963882 - AA545190 lincRNA lincRNA MGP_LPJ_T0008521.1 MGP_LPJ_G0006901.1 mouse_genomes_project 6 7956244 7963857 - AA545190 lincRNA lincRNA MGP_LPJ_T0008522.1 MGP_LPJ_G0006901.1 mouse_genomes_project 6 7956303 7958624 - AA545190 lincRNA lincRNA MGP_LPJ_T0015373.1 MGP_LPJ_G0013464.1 mouse_genomes_project 6 68194075 68194366 - processed_pseudogene processed_pseudogene MGP_LPJ_T0076001.1 MGP_LPJ_G0030338.1 mouse_genomes_project 6 2009187 2046859 - MGP_LPJ_P0076001 Pon3 protein_coding nonsense_mediated_decay MGP_LPJ_T0076002.1 MGP_LPJ_G0030338.1 mouse_genomes_project 6 2009187 2046912 - MGP_LPJ_P0076002 Pon3 protein_coding protein_coding MGP_LPJ_T0076003.1 MGP_LPJ_G0030338.1 mouse_genomes_project 6 2021958 2046861 - MGP_LPJ_P0076003 Pon3 protein_coding protein_coding MGP_LPJ_T0076004.1 MGP_LPJ_G0030338.1 mouse_genomes_project 6 2026500 2046840 - Pon3 protein_coding retained_intron MGP_LPJ_T0076005.1 MGP_LPJ_G0030338.1 mouse_genomes_project 6 2026943 2045492 - Pon3 protein_coding retained_intron MGP_LPJ_T0076006.1 MGP_LPJ_G0030338.1 mouse_genomes_project 6 2045205 2046193 - Pon3 protein_coding processed_transcript MGP_LPJ_T0002182.1 MGP_LPJ_G0002091.1 mouse_genomes_project 6 137372753 137374577 + TEC TEC MGP_LPJ_T0015594.1 MGP_LPJ_G0013685.1 mouse_genomes_project 6 137096216 137096642 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002112.1 MGP_LPJ_G0002022.1 mouse_genomes_project 6 93284877 93286820 - TEC TEC MGP_LPJ_T0015539.1 MGP_LPJ_G0013630.1 mouse_genomes_project 6 125814215 125814975 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002096.1 MGP_LPJ_G0002006.1 mouse_genomes_project 6 89956040 89957035 + TEC TEC MGP_LPJ_T0015517.1 MGP_LPJ_G0013608.1 mouse_genomes_project 6 120542846 120543347 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008608.1 MGP_LPJ_G0006959.1 mouse_genomes_project 6 50527394 50542952 + Gm6559 lincRNA lincRNA MGP_LPJ_T0005095.1 MGP_LPJ_G0004346.1 mouse_genomes_project 6 118764581 118788038 + Gm20404 antisense antisense MGP_LPJ_T0002160.1 MGP_LPJ_G0002069.1 mouse_genomes_project 6 120665145 120666337 - TEC TEC MGP_LPJ_T0015410.1 MGP_LPJ_G0013501.1 mouse_genomes_project 6 82316637 82317090 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008646.1 MGP_LPJ_G0006990.1 mouse_genomes_project 6 72604033 72608892 + Gm45050 lincRNA lincRNA MGP_LPJ_T0008587.1 MGP_LPJ_G0006942.1 mouse_genomes_project 6 36907778 36910238 - Gm26699 lincRNA lincRNA MGP_LPJ_T0099637.1 MGP_LPJ_G0037900.1 mouse_genomes_project 6 24217267 24217407 - Gm24691 snRNA snRNA MGP_LPJ_T0008645.1 MGP_LPJ_G0006989.1 mouse_genomes_project 6 72445280 72474601 - 9130221F21Rik lincRNA lincRNA MGP_LPJ_T0077575.1 MGP_LPJ_G0030710.1 mouse_genomes_project 6 57358933 57360480 - MGP_LPJ_P0077575 protein_coding protein_coding MGP_LPJ_T0076650.1 MGP_LPJ_G0030461.1 mouse_genomes_project 6 32495838 32501182 - Akr1b3 protein_coding retained_intron MGP_LPJ_T0076651.1 MGP_LPJ_G0030461.1 mouse_genomes_project 6 32497338 32511203 - MGP_LPJ_P0076651 Akr1b3 protein_coding protein_coding MGP_LPJ_T0076652.1 MGP_LPJ_G0030461.1 mouse_genomes_project 6 32501347 32511166 - Akr1b3 protein_coding retained_intron MGP_LPJ_T0076653.1 MGP_LPJ_G0030461.1 mouse_genomes_project 6 32503517 32511155 - Akr1b3 protein_coding retained_intron MGP_LPJ_T0076654.1 MGP_LPJ_G0030461.1 mouse_genomes_project 6 32504329 32511184 - MGP_LPJ_P0076654 Akr1b3 protein_coding protein_coding MGP_LPJ_T0000213.1 MGP_LPJ_G0000162.1 mouse_genomes_project 6 70102616 70103170 - MGP_LPJ_P0000213 Igkv5-39 IG_V_gene IG_V_gene MGP_LPJ_T0000214.1 MGP_LPJ_G0000162.1 mouse_genomes_project 6 70102616 70102903 - MGP_LPJ_P0000214 Igkv5-39 IG_V_gene IG_V_gene MGP_LPJ_T0005155.1 MGP_LPJ_G0004398.1 mouse_genomes_project 6 153189680 153223113 - Far2os2 antisense antisense MGP_LPJ_T0008597.1 MGP_LPJ_G0006951.1 mouse_genomes_project 6 47699664 47700705 + 4833403J16Rik lincRNA lincRNA MGP_LPJ_T0078965.1 MGP_LPJ_G0030999.1 mouse_genomes_project 6 110545682 110882748 + MGP_LPJ_P0078965 Itpr1 protein_coding protein_coding MGP_LPJ_T0078966.1 MGP_LPJ_G0030999.1 mouse_genomes_project 6 110545688 110882756 + MGP_LPJ_P0078966 Itpr1 protein_coding unknown_likely_coding MGP_LPJ_T0078967.1 MGP_LPJ_G0030999.1 mouse_genomes_project 6 110545788 110882748 + MGP_LPJ_P0078967 Itpr1 protein_coding protein_coding MGP_LPJ_T0078968.1 MGP_LPJ_G0030999.1 mouse_genomes_project 6 110585565 110726324 + Itpr1 protein_coding retained_intron MGP_LPJ_T0078969.1 MGP_LPJ_G0030999.1 mouse_genomes_project 6 110689946 110711355 + MGP_LPJ_P0078969 Itpr1 protein_coding protein_coding MGP_LPJ_T0078970.1 MGP_LPJ_G0030999.1 mouse_genomes_project 6 110748452 110752192 + Itpr1 protein_coding retained_intron MGP_LPJ_T0078971.1 MGP_LPJ_G0030999.1 mouse_genomes_project 6 110749986 110773693 + MGP_LPJ_P0078971 Itpr1 protein_coding protein_coding MGP_LPJ_T0078972.1 MGP_LPJ_G0030999.1 mouse_genomes_project 6 110750053 110806707 + MGP_LPJ_P0078972 Itpr1 protein_coding protein_coding MGP_LPJ_T0078973.1 MGP_LPJ_G0030999.1 mouse_genomes_project 6 110751067 110773648 + MGP_LPJ_P0078973 Itpr1 protein_coding protein_coding MGP_LPJ_T0078974.1 MGP_LPJ_G0030999.1 mouse_genomes_project 6 110791767 110804193 + Itpr1 protein_coding processed_transcript MGP_LPJ_T0078975.1 MGP_LPJ_G0030999.1 mouse_genomes_project 6 110839643 110844410 + Itpr1 protein_coding retained_intron MGP_LPJ_T0078976.1 MGP_LPJ_G0030999.1 mouse_genomes_project 6 110850213 110851116 + Itpr1 protein_coding retained_intron MGP_LPJ_T0080469.1 MGP_LPJ_G0031340.1 mouse_genomes_project 6 141899555 142044148 + Ptpro protein_coding retained_intron MGP_LPJ_T0080470.1 MGP_LPJ_G0031340.1 mouse_genomes_project 6 141899570 142126971 + MGP_LPJ_P0080470 Ptpro protein_coding protein_coding MGP_LPJ_T0080471.1 MGP_LPJ_G0031340.1 mouse_genomes_project 6 141899701 142126971 + MGP_LPJ_P0080471 Ptpro protein_coding protein_coding MGP_LPJ_T0080472.1 MGP_LPJ_G0031340.1 mouse_genomes_project 6 142077007 142126977 + MGP_LPJ_P0080472 Ptpro protein_coding protein_coding MGP_LPJ_T0080473.1 MGP_LPJ_G0031340.1 mouse_genomes_project 6 142077023 142126977 + MGP_LPJ_P0080473 Ptpro protein_coding protein_coding MGP_LPJ_T0080474.1 MGP_LPJ_G0031340.1 mouse_genomes_project 6 142077045 142080875 + Ptpro protein_coding retained_intron MGP_LPJ_T0080475.1 MGP_LPJ_G0031340.1 mouse_genomes_project 6 142116381 142126048 + Ptpro protein_coding processed_transcript MGP_LPJ_T0080476.1 MGP_LPJ_G0031340.1 mouse_genomes_project 6 142117717 142126366 + Ptpro protein_coding processed_transcript MGP_LPJ_T0000349.1 MGP_LPJ_G0000287.1 mouse_genomes_project 6 69858707 69859025 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0080595.1 MGP_LPJ_G0031361.1 mouse_genomes_project 6 146833319 146878060 - MGP_LPJ_P0080595 Slco1a1 protein_coding protein_coding MGP_LPJ_T0080596.1 MGP_LPJ_G0031361.1 mouse_genomes_project 6 146854008 146878238 - Slco1a1 protein_coding retained_intron MGP_LPJ_T0077126.1 MGP_LPJ_G0030593.1 mouse_genomes_project 6 46834532 46854990 - MGP_LPJ_P0077126 Zfp777 protein_coding protein_coding MGP_LPJ_T0077127.1 MGP_LPJ_G0030593.1 mouse_genomes_project 6 46834549 46860009 - MGP_LPJ_P0077127 Zfp777 protein_coding protein_coding MGP_LPJ_T0077128.1 MGP_LPJ_G0030593.1 mouse_genomes_project 6 46839723 46854532 - MGP_LPJ_P0077128 Zfp777 protein_coding protein_coding MGP_LPJ_T0077129.1 MGP_LPJ_G0030593.1 mouse_genomes_project 6 46854451 46854990 - MGP_LPJ_P0077129 Zfp777 protein_coding protein_coding MGP_LPJ_T0077130.1 MGP_LPJ_G0030593.1 mouse_genomes_project 6 46854733 46858083 - MGP_LPJ_P0077130 Zfp777 protein_coding protein_coding MGP_LPJ_T0078682.1 MGP_LPJ_G0030942.1 mouse_genomes_project 6 92699029 92718800 + MGP_LPJ_P0078682 Hdac11 protein_coding protein_coding MGP_LPJ_T0078683.1 MGP_LPJ_G0030942.1 mouse_genomes_project 6 92699097 92701996 + Hdac11 protein_coding retained_intron MGP_LPJ_T0078684.1 MGP_LPJ_G0030942.1 mouse_genomes_project 6 92699105 92710656 + MGP_LPJ_P0078684 Hdac11 protein_coding protein_coding MGP_LPJ_T0078685.1 MGP_LPJ_G0030942.1 mouse_genomes_project 6 92699443 92711978 + Hdac11 protein_coding retained_intron MGP_LPJ_T0078686.1 MGP_LPJ_G0030942.1 mouse_genomes_project 6 92709785 92713584 + MGP_LPJ_P0078686 Hdac11 protein_coding nonsense_mediated_decay MGP_LPJ_T0078687.1 MGP_LPJ_G0030942.1 mouse_genomes_project 6 92715890 92717399 + Hdac11 protein_coding retained_intron MGP_LPJ_T0079049.1 MGP_LPJ_G0031014.1 mouse_genomes_project 6 115834722 115858042 + Cpne9 protein_coding retained_intron MGP_LPJ_T0079050.1 MGP_LPJ_G0031014.1 mouse_genomes_project 6 115834722 115857984 + MGP_LPJ_P0079050 Cpne9 protein_coding protein_coding MGP_LPJ_T0079051.1 MGP_LPJ_G0031014.1 mouse_genomes_project 6 115834725 115857239 + MGP_LPJ_P0079051 Cpne9 protein_coding nonsense_mediated_decay MGP_LPJ_T0079052.1 MGP_LPJ_G0031014.1 mouse_genomes_project 6 115834750 115835845 + Cpne9 protein_coding retained_intron MGP_LPJ_T0079053.1 MGP_LPJ_G0031014.1 mouse_genomes_project 6 115834751 115837684 + Cpne9 protein_coding retained_intron MGP_LPJ_T0079054.1 MGP_LPJ_G0031014.1 mouse_genomes_project 6 115834754 115835922 + Cpne9 protein_coding retained_intron MGP_LPJ_T0079055.1 MGP_LPJ_G0031014.1 mouse_genomes_project 6 115834779 115836385 + Cpne9 protein_coding processed_transcript MGP_LPJ_T0079056.1 MGP_LPJ_G0031014.1 mouse_genomes_project 6 115834780 115836840 + Cpne9 protein_coding processed_transcript MGP_LPJ_T0079057.1 MGP_LPJ_G0031014.1 mouse_genomes_project 6 115834889 115857036 + MGP_LPJ_P0079057 Cpne9 protein_coding unknown_likely_coding MGP_LPJ_T0079058.1 MGP_LPJ_G0031014.1 mouse_genomes_project 6 115840919 115857986 + Cpne9 protein_coding retained_intron MGP_LPJ_T0079059.1 MGP_LPJ_G0031014.1 mouse_genomes_project 6 115846739 115854094 + Cpne9 protein_coding processed_transcript MGP_LPJ_T0010792.1 MGP_LPJ_G0008910.1 mouse_genomes_project 6 55546738 55546842 - Gm44413 miRNA miRNA MGP_LPJ_T0002021.1 MGP_LPJ_G0001931.1 mouse_genomes_project 6 56295914 56296586 - TEC TEC MGP_LPJ_T0077459.1 MGP_LPJ_G0030670.1 mouse_genomes_project 6 54313876 54324188 - MGP_LPJ_P0077459 Ggct protein_coding protein_coding MGP_LPJ_T0077460.1 MGP_LPJ_G0030670.1 mouse_genomes_project 6 54316969 54323945 - Ggct protein_coding processed_transcript MGP_LPJ_T0077461.1 MGP_LPJ_G0030670.1 mouse_genomes_project 6 54317253 54324099 - MGP_LPJ_P0077461 Ggct protein_coding nonsense_mediated_decay MGP_LPJ_T0077462.1 MGP_LPJ_G0030670.1 mouse_genomes_project 6 54317277 54324101 - MGP_LPJ_P0077462 Ggct protein_coding protein_coding MGP_LPJ_T0077463.1 MGP_LPJ_G0030670.1 mouse_genomes_project 6 54317802 54324101 - Ggct protein_coding retained_intron MGP_LPJ_T0077464.1 MGP_LPJ_G0030670.1 mouse_genomes_project 6 54320375 54323862 - Ggct protein_coding retained_intron MGP_LPJ_T0008634.1 MGP_LPJ_G0006979.1 mouse_genomes_project 6 66308195 66317520 - Gm44029 lincRNA lincRNA MGP_LPJ_T0008635.1 MGP_LPJ_G0006979.1 mouse_genomes_project 6 66310440 66317559 - Gm44029 lincRNA lincRNA MGP_LPJ_T0080263.1 MGP_LPJ_G0031266.1 mouse_genomes_project 6 133901690 134275339 - MGP_LPJ_P0080263 protein_coding protein_coding MGP_LPJ_T0101383.1 MGP_LPJ_G0039573.1 mouse_genomes_project 6 66112283 66134151 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101384.1 MGP_LPJ_G0039573.1 mouse_genomes_project 6 66122012 66135257 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101385.1 MGP_LPJ_G0039573.1 mouse_genomes_project 6 66133918 66134651 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0002118.1 MGP_LPJ_G0002028.1 mouse_genomes_project 6 94836207 94840564 + TEC TEC MGP_LPJ_T0080586.1 MGP_LPJ_G0031358.1 mouse_genomes_project 6 146524028 146588309 + MGP_LPJ_P0080586 Slco1b2 protein_coding protein_coding MGP_LPJ_T0080587.1 MGP_LPJ_G0031358.1 mouse_genomes_project 6 146528793 146587268 + MGP_LPJ_P0080587 Slco1b2 protein_coding protein_coding MGP_LPJ_T0080588.1 MGP_LPJ_G0031358.1 mouse_genomes_project 6 146549163 146553825 + Slco1b2 protein_coding retained_intron MGP_LPJ_T0080589.1 MGP_LPJ_G0031358.1 mouse_genomes_project 6 146582891 146587271 + Slco1b2 protein_coding retained_intron MGP_LPJ_T0015396.1 MGP_LPJ_G0013487.1 mouse_genomes_project 6 73825143 73825567 - processed_pseudogene processed_pseudogene MGP_LPJ_T0080281.1 MGP_LPJ_G0031273.1 mouse_genomes_project 6 135608659 135633553 - MGP_LPJ_P0080281 Ybx3 protein_coding protein_coding MGP_LPJ_T0080282.1 MGP_LPJ_G0031273.1 mouse_genomes_project 6 135608659 135633515 - MGP_LPJ_P0080282 Ybx3 protein_coding protein_coding MGP_LPJ_T0080283.1 MGP_LPJ_G0031273.1 mouse_genomes_project 6 135608894 135623341 - Ybx3 protein_coding processed_transcript MGP_LPJ_T0080284.1 MGP_LPJ_G0031273.1 mouse_genomes_project 6 135608904 135612809 - Ybx3 protein_coding retained_intron MGP_LPJ_T0080285.1 MGP_LPJ_G0031273.1 mouse_genomes_project 6 135621254 135623602 - Ybx3 protein_coding processed_transcript MGP_LPJ_T0076184.1 MGP_LPJ_G0030375.1 mouse_genomes_project 6 14787653 14908342 + MGP_LPJ_P0076184 Met protein_coding protein_coding MGP_LPJ_T0076185.1 MGP_LPJ_G0030375.1 mouse_genomes_project 6 14787680 14820531 + MGP_LPJ_P0076185 Met protein_coding protein_coding MGP_LPJ_T0076186.1 MGP_LPJ_G0030375.1 mouse_genomes_project 6 14787891 14906591 + MGP_LPJ_P0076186 Met protein_coding protein_coding MGP_LPJ_T0076187.1 MGP_LPJ_G0030375.1 mouse_genomes_project 6 14787960 14875809 + Met protein_coding retained_intron MGP_LPJ_T0076188.1 MGP_LPJ_G0030375.1 mouse_genomes_project 6 14820024 14906185 + MGP_LPJ_P0076188 Met protein_coding protein_coding MGP_LPJ_T0076189.1 MGP_LPJ_G0030375.1 mouse_genomes_project 6 14869135 14881607 + MGP_LPJ_P0076189 Met protein_coding protein_coding MGP_LPJ_T0076190.1 MGP_LPJ_G0030375.1 mouse_genomes_project 6 14881369 14887811 + MGP_LPJ_P0076190 Met protein_coding protein_coding MGP_LPJ_T0076477.1 MGP_LPJ_G0030435.1 mouse_genomes_project 6 27689378 27691875 + Smo protein_coding retained_intron MGP_LPJ_T0076478.1 MGP_LPJ_G0030435.1 mouse_genomes_project 6 27689882 27720138 + MGP_LPJ_P0076478 Smo protein_coding protein_coding MGP_LPJ_T0000193.1 MGP_LPJ_G0000143.1 mouse_genomes_project 6 69008794 69009260 - MGP_LPJ_P0000193 Igkv13-84 IG_V_gene IG_V_gene MGP_LPJ_T0102241.1 MGP_LPJ_G0040278.1 mouse_genomes_project 6 66638262 66653398 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0077043.1 MGP_LPJ_G0030564.1 mouse_genomes_project 6 41251718 41252672 + MGP_LPJ_P0077043 Olfr453 protein_coding protein_coding MGP_LPJ_T0002181.1 MGP_LPJ_G0002090.1 mouse_genomes_project 6 137212614 137212927 - TEC TEC MGP_LPJ_T0008547.1 MGP_LPJ_G0006919.1 mouse_genomes_project 6 29156475 29156879 - Gm27019 lincRNA lincRNA MGP_LPJ_T0015301.1 MGP_LPJ_G0013392.1 mouse_genomes_project 6 49849023 49850153 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015196.1 MGP_LPJ_G0013287.1 mouse_genomes_project 6 6065162 6065475 + processed_pseudogene processed_pseudogene MGP_LPJ_T0077515.1 MGP_LPJ_G0030683.1 mouse_genomes_project 6 56098731 56100147 + Avl9 protein_coding retained_intron MGP_LPJ_T0077516.1 MGP_LPJ_G0030683.1 mouse_genomes_project 6 56098759 56142682 + MGP_LPJ_P0077516 Avl9 protein_coding protein_coding MGP_LPJ_T0077517.1 MGP_LPJ_G0030683.1 mouse_genomes_project 6 56098770 56122229 + MGP_LPJ_P0077517 Avl9 protein_coding protein_coding MGP_LPJ_T0077518.1 MGP_LPJ_G0030683.1 mouse_genomes_project 6 56098774 56113306 + MGP_LPJ_P0077518 Avl9 protein_coding nonsense_mediated_decay MGP_LPJ_T0077519.1 MGP_LPJ_G0030683.1 mouse_genomes_project 6 56125981 56134794 + Avl9 protein_coding retained_intron MGP_LPJ_T0015464.1 MGP_LPJ_G0013555.1 mouse_genomes_project 6 101782572 101783038 + processed_pseudogene processed_pseudogene MGP_LPJ_T0079385.1 MGP_LPJ_G0031074.1 mouse_genomes_project 6 119411161 119433292 - MGP_LPJ_P0079385 protein_coding unknown_likely_coding MGP_LPJ_T0079386.1 MGP_LPJ_G0031074.1 mouse_genomes_project 6 119411384 119433444 - MGP_LPJ_P0079386 protein_coding nonsense_mediated_decay MGP_LPJ_T0076318.1 MGP_LPJ_G0030401.1 mouse_genomes_project 6 22317290 22324876 + MGP_LPJ_P0076318 Lmod2 protein_coding protein_coding MGP_LPJ_T0005016.1 MGP_LPJ_G0004299.1 mouse_genomes_project 6 84167728 84175425 - Gm15624 antisense antisense MGP_LPJ_T0005017.1 MGP_LPJ_G0004299.1 mouse_genomes_project 6 84172031 84175447 - Gm15624 antisense antisense MGP_LPJ_T0005018.1 MGP_LPJ_G0004299.1 mouse_genomes_project 6 84172483 84175246 - Gm15624 antisense antisense MGP_LPJ_T0015412.1 MGP_LPJ_G0013503.1 mouse_genomes_project 6 83184224 83184896 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015312.1 MGP_LPJ_G0013403.1 mouse_genomes_project 6 57075786 57076039 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011648.1 MGP_LPJ_G0009766.1 mouse_genomes_project 6 28770197 28770427 + Gm27522 misc_RNA misc_RNA MGP_LPJ_T0080047.1 MGP_LPJ_G0031201.1 mouse_genomes_project 6 130099162 130102024 - MGP_LPJ_P0080047 Kcna5 protein_coding protein_coding MGP_LPJ_T0079581.1 MGP_LPJ_G0031105.1 mouse_genomes_project 6 123568156 123628189 + Cecr2 protein_coding retained_intron MGP_LPJ_T0079582.1 MGP_LPJ_G0031105.1 mouse_genomes_project 6 123568208 123679075 + MGP_LPJ_P0079582 Cecr2 protein_coding protein_coding MGP_LPJ_T0079583.1 MGP_LPJ_G0031105.1 mouse_genomes_project 6 123568322 123628017 + Cecr2 protein_coding processed_transcript MGP_LPJ_T0079584.1 MGP_LPJ_G0031105.1 mouse_genomes_project 6 123568369 123674807 + MGP_LPJ_P0079584 Cecr2 protein_coding protein_coding MGP_LPJ_T0079585.1 MGP_LPJ_G0031105.1 mouse_genomes_project 6 123641813 123663925 + Cecr2 protein_coding processed_transcript MGP_LPJ_T0079586.1 MGP_LPJ_G0031105.1 mouse_genomes_project 6 123641880 123662800 + MGP_LPJ_P0079586 Cecr2 protein_coding protein_coding MGP_LPJ_T0079587.1 MGP_LPJ_G0031105.1 mouse_genomes_project 6 123643010 123647242 + Cecr2 protein_coding retained_intron MGP_LPJ_T0079588.1 MGP_LPJ_G0031105.1 mouse_genomes_project 6 123665384 123669608 + MGP_LPJ_P0079588 Cecr2 protein_coding protein_coding MGP_LPJ_T0079262.1 MGP_LPJ_G0031051.1 mouse_genomes_project 6 118264204 118283954 - Raf1 protein_coding retained_intron MGP_LPJ_T0079263.1 MGP_LPJ_G0031051.1 mouse_genomes_project 6 118264706 118326579 - MGP_LPJ_P0079263 Raf1 protein_coding protein_coding MGP_LPJ_T0079264.1 MGP_LPJ_G0031051.1 mouse_genomes_project 6 118264706 118327250 - MGP_LPJ_P0079264 Raf1 protein_coding protein_coding MGP_LPJ_T0079265.1 MGP_LPJ_G0031051.1 mouse_genomes_project 6 118264734 118267963 - MGP_LPJ_P0079265 Raf1 protein_coding protein_coding MGP_LPJ_T0079266.1 MGP_LPJ_G0031051.1 mouse_genomes_project 6 118265378 118266456 - Raf1 protein_coding retained_intron MGP_LPJ_T0079267.1 MGP_LPJ_G0031051.1 mouse_genomes_project 6 118265731 118269682 - MGP_LPJ_P0079267 Raf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0079268.1 MGP_LPJ_G0031051.1 mouse_genomes_project 6 118266402 118280059 - Raf1 protein_coding retained_intron MGP_LPJ_T0079269.1 MGP_LPJ_G0031051.1 mouse_genomes_project 6 118267953 118273167 - Raf1 protein_coding retained_intron MGP_LPJ_T0079270.1 MGP_LPJ_G0031051.1 mouse_genomes_project 6 118267963 118273205 - Raf1 protein_coding retained_intron MGP_LPJ_T0079271.1 MGP_LPJ_G0031051.1 mouse_genomes_project 6 118269660 118282328 - MGP_LPJ_P0079271 Raf1 protein_coding protein_coding MGP_LPJ_T0079272.1 MGP_LPJ_G0031051.1 mouse_genomes_project 6 118279530 118327250 - Raf1 protein_coding retained_intron MGP_LPJ_T0000242.1 MGP_LPJ_G0000182.1 mouse_genomes_project 6 70720344 70720631 - MGP_LPJ_P0000242 Igkv6-13 IG_V_gene IG_V_gene MGP_LPJ_T0000243.1 MGP_LPJ_G0000182.1 mouse_genomes_project 6 70720344 70721993 - MGP_LPJ_P0000243 Igkv6-13 IG_V_gene IG_V_gene MGP_LPJ_T0001966.1 MGP_LPJ_G0001876.1 mouse_genomes_project 6 26439503 26441375 + TEC TEC MGP_LPJ_T0077977.1 MGP_LPJ_G0030802.1 mouse_genomes_project 6 83346957 83349988 + Tacr1 protein_coding retained_intron MGP_LPJ_T0077978.1 MGP_LPJ_G0030802.1 mouse_genomes_project 6 83347098 83512172 + MGP_LPJ_P0077978 Tacr1 protein_coding protein_coding MGP_LPJ_T0077979.1 MGP_LPJ_G0030802.1 mouse_genomes_project 6 83347410 83512177 + MGP_LPJ_P0077979 Tacr1 protein_coding protein_coding MGP_LPJ_T0002138.1 MGP_LPJ_G0002048.1 mouse_genomes_project 6 105725688 105729280 + TEC TEC MGP_LPJ_T0075941.1 MGP_LPJ_G0030327.1 mouse_genomes_project 6 407700 485094 - MGP_LPJ_P0075941 Calcr protein_coding protein_coding MGP_LPJ_T0075942.1 MGP_LPJ_G0030327.1 mouse_genomes_project 6 407740 486178 - MGP_LPJ_P0075942 Calcr protein_coding protein_coding MGP_LPJ_T0075943.1 MGP_LPJ_G0030327.1 mouse_genomes_project 6 407753 486122 - MGP_LPJ_P0075943 Calcr protein_coding protein_coding MGP_LPJ_T0075944.1 MGP_LPJ_G0030327.1 mouse_genomes_project 6 408842 474441 - MGP_LPJ_P0075944 Calcr protein_coding protein_coding MGP_LPJ_T0075945.1 MGP_LPJ_G0030327.1 mouse_genomes_project 6 408842 474441 - MGP_LPJ_P0075945 Calcr protein_coding protein_coding MGP_LPJ_T0008556.1 MGP_LPJ_G0006925.1 mouse_genomes_project 6 29476591 29487576 + Gm13844 lincRNA lincRNA MGP_LPJ_T0099660.1 MGP_LPJ_G0037923.1 mouse_genomes_project 6 84751514 84751611 + Gm25054 snRNA snRNA MGP_LPJ_T0099645.1 MGP_LPJ_G0037908.1 mouse_genomes_project 6 40119971 40120033 - Gm27549 snRNA snRNA MGP_LPJ_T0010789.1 MGP_LPJ_G0008907.1 mouse_genomes_project 6 50792864 50792941 + Gm22914 miRNA miRNA MGP_LPJ_T0100914.1 MGP_LPJ_G0039177.1 mouse_genomes_project 6 99685501 99685644 + Gm23703 snoRNA snoRNA MGP_LPJ_T0000325.1 MGP_LPJ_G0000263.1 mouse_genomes_project 6 68213206 68213671 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0077220.1 MGP_LPJ_G0030615.1 mouse_genomes_project 6 47709303 47719171 - MGP_LPJ_P0077220 Gimap3 protein_coding protein_coding MGP_LPJ_T0077221.1 MGP_LPJ_G0030615.1 mouse_genomes_project 6 47709305 47715278 - MGP_LPJ_P0077221 Gimap3 protein_coding protein_coding MGP_LPJ_T0015235.1 MGP_LPJ_G0013326.1 mouse_genomes_project 6 24608738 24609480 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101571.1 MGP_LPJ_G0039664.1 mouse_genomes_project 6 57142609 57142826 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0002149.1 MGP_LPJ_G0002059.1 mouse_genomes_project 6 116242647 116245135 - TEC TEC MGP_LPJ_T0078630.1 MGP_LPJ_G0030932.1 mouse_genomes_project 6 91797735 91801960 + MGP_LPJ_P0078630 BC048671 protein_coding protein_coding MGP_LPJ_T0078631.1 MGP_LPJ_G0030932.1 mouse_genomes_project 6 91798632 91801960 + MGP_LPJ_P0078631 BC048671 protein_coding protein_coding MGP_LPJ_T0077046.1 MGP_LPJ_G0030567.1 mouse_genomes_project 6 41324683 41325616 + MGP_LPJ_P0077046 Olfr450 protein_coding protein_coding MGP_LPJ_T0001943.1 MGP_LPJ_G0001853.1 mouse_genomes_project 6 2004194 2007916 - TEC TEC MGP_LPJ_T0002702.1 MGP_LPJ_G0002582.1 mouse_genomes_project 6 39382241 39382898 + MGP_LPJ_P0002702 Trbv1 TR_V_gene TR_V_gene MGP_LPJ_T0098714.1 MGP_LPJ_G0036978.1 mouse_genomes_project 6 39567670 39577982 + Gm37610 sense_overlapping sense_overlapping MGP_LPJ_T0076395.1 MGP_LPJ_G0030421.1 mouse_genomes_project 6 27111151 27128316 - MGP_LPJ_P0076395 Impdh1 protein_coding protein_coding MGP_LPJ_T0076396.1 MGP_LPJ_G0030421.1 mouse_genomes_project 6 27111154 27124234 - MGP_LPJ_P0076396 Impdh1 protein_coding protein_coding MGP_LPJ_T0076397.1 MGP_LPJ_G0030421.1 mouse_genomes_project 6 27111154 27124282 - MGP_LPJ_P0076397 Impdh1 protein_coding protein_coding MGP_LPJ_T0076398.1 MGP_LPJ_G0030421.1 mouse_genomes_project 6 27111154 27128349 - MGP_LPJ_P0076398 Impdh1 protein_coding protein_coding MGP_LPJ_T0076399.1 MGP_LPJ_G0030421.1 mouse_genomes_project 6 27111155 27128327 - MGP_LPJ_P0076399 Impdh1 protein_coding protein_coding MGP_LPJ_T0076400.1 MGP_LPJ_G0030421.1 mouse_genomes_project 6 27111162 27114136 - MGP_LPJ_P0076400 Impdh1 protein_coding protein_coding MGP_LPJ_T0076401.1 MGP_LPJ_G0030421.1 mouse_genomes_project 6 27115277 27118452 - Impdh1 protein_coding retained_intron MGP_LPJ_T0076402.1 MGP_LPJ_G0030421.1 mouse_genomes_project 6 27115822 27128262 - MGP_LPJ_P0076402 Impdh1 protein_coding protein_coding MGP_LPJ_T0076403.1 MGP_LPJ_G0030421.1 mouse_genomes_project 6 27118829 27121613 - Impdh1 protein_coding retained_intron MGP_LPJ_T0076404.1 MGP_LPJ_G0030421.1 mouse_genomes_project 6 27118995 27127914 - MGP_LPJ_P0076404 Impdh1 protein_coding protein_coding MGP_LPJ_T0076579.1 MGP_LPJ_G0030449.1 mouse_genomes_project 6 28758467 28768494 + MGP_LPJ_P0076579 Mest protein_coding protein_coding MGP_LPJ_T0076580.1 MGP_LPJ_G0030449.1 mouse_genomes_project 6 28758467 28780961 + MGP_LPJ_P0076580 Mest protein_coding protein_coding MGP_LPJ_T0076581.1 MGP_LPJ_G0030449.1 mouse_genomes_project 6 28767747 28780965 + MGP_LPJ_P0076581 Mest protein_coding protein_coding MGP_LPJ_T0076582.1 MGP_LPJ_G0030449.1 mouse_genomes_project 6 28769233 28781223 + MGP_LPJ_P0076582 Mest protein_coding protein_coding MGP_LPJ_T0076583.1 MGP_LPJ_G0030449.1 mouse_genomes_project 6 28769285 28786849 + MGP_LPJ_P0076583 Mest protein_coding protein_coding MGP_LPJ_T0076584.1 MGP_LPJ_G0030449.1 mouse_genomes_project 6 28773828 28786849 + MGP_LPJ_P0076584 Mest protein_coding protein_coding MGP_LPJ_T0076585.1 MGP_LPJ_G0030449.1 mouse_genomes_project 6 28773831 28786852 + MGP_LPJ_P0076585 Mest protein_coding protein_coding MGP_LPJ_T0076586.1 MGP_LPJ_G0030449.1 mouse_genomes_project 6 28773833 28774657 + Mest protein_coding processed_transcript MGP_LPJ_T0076587.1 MGP_LPJ_G0030449.1 mouse_genomes_project 6 28779168 28781529 + Mest protein_coding retained_intron MGP_LPJ_T0076588.1 MGP_LPJ_G0030449.1 mouse_genomes_project 6 28780462 28781527 + Mest protein_coding retained_intron MGP_LPJ_T0076589.1 MGP_LPJ_G0030449.1 mouse_genomes_project 6 28780475 28781537 + Mest protein_coding retained_intron MGP_LPJ_T0002715.1 MGP_LPJ_G0002594.1 mouse_genomes_project 6 39643601 39644092 + MGP_LPJ_P0002715 Trbv16 TR_V_gene TR_V_gene MGP_LPJ_T0015318.1 MGP_LPJ_G0013409.1 mouse_genomes_project 6 58038796 58039057 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001969.1 MGP_LPJ_G0001879.1 mouse_genomes_project 6 27480506 27482033 - TEC TEC MGP_LPJ_T0079109.1 MGP_LPJ_G0031022.1 mouse_genomes_project 6 115981312 115990468 - MGP_LPJ_P0079109 Cidec protein_coding protein_coding MGP_LPJ_T0079110.1 MGP_LPJ_G0031022.1 mouse_genomes_project 6 115984221 115990347 - MGP_LPJ_P0079110 Cidec protein_coding protein_coding MGP_LPJ_T0078272.1 MGP_LPJ_G0030856.1 mouse_genomes_project 6 86754291 86832238 + MGP_LPJ_P0078272 Alms1 protein_coding unknown_likely_coding MGP_LPJ_T0078273.1 MGP_LPJ_G0030856.1 mouse_genomes_project 6 86754292 86838717 + MGP_LPJ_P0078273 Alms1 protein_coding unknown_likely_coding MGP_LPJ_T0078274.1 MGP_LPJ_G0030856.1 mouse_genomes_project 6 86754359 86992960 + MGP_LPJ_P0078274 Alms1 protein_coding protein_coding MGP_LPJ_T0078275.1 MGP_LPJ_G0030856.1 mouse_genomes_project 6 86811742 86814471 + Alms1 protein_coding retained_intron MGP_LPJ_T0078276.1 MGP_LPJ_G0030856.1 mouse_genomes_project 6 86819009 86823493 + Alms1 protein_coding retained_intron MGP_LPJ_T0078277.1 MGP_LPJ_G0030856.1 mouse_genomes_project 6 86943292 86946430 + Alms1 protein_coding retained_intron MGP_LPJ_T0078278.1 MGP_LPJ_G0030856.1 mouse_genomes_project 6 86951059 86992966 + MGP_LPJ_P0078278 Alms1 protein_coding unknown_likely_coding MGP_LPJ_T0076365.1 MGP_LPJ_G0030415.1 mouse_genomes_project 6 26303936 26312214 - MGP_LPJ_P0076365 Pax4 protein_coding protein_coding MGP_LPJ_T0076366.1 MGP_LPJ_G0030415.1 mouse_genomes_project 6 26303936 26312316 - MGP_LPJ_P0076366 Pax4 protein_coding protein_coding MGP_LPJ_T0076367.1 MGP_LPJ_G0030415.1 mouse_genomes_project 6 26303941 26312214 - MGP_LPJ_P0076367 Pax4 protein_coding protein_coding MGP_LPJ_T0076368.1 MGP_LPJ_G0030415.1 mouse_genomes_project 6 26303977 26310142 - MGP_LPJ_P0076368 Pax4 protein_coding protein_coding MGP_LPJ_T0076369.1 MGP_LPJ_G0030415.1 mouse_genomes_project 6 26306847 26309339 - Pax4 protein_coding retained_intron MGP_LPJ_T0076370.1 MGP_LPJ_G0030415.1 mouse_genomes_project 6 26307738 26310142 - Pax4 protein_coding retained_intron MGP_LPJ_T0077583.1 MGP_LPJ_G0030718.1 mouse_genomes_project 6 57945627 57946680 - MGP_LPJ_P0077583 Vmn1r30 protein_coding protein_coding MGP_LPJ_T0002141.1 MGP_LPJ_G0002051.1 mouse_genomes_project 6 105810480 105811974 + TEC TEC MGP_LPJ_T0002121.1 MGP_LPJ_G0002031.1 mouse_genomes_project 6 96556828 96557833 + TEC TEC MGP_LPJ_T0001991.1 MGP_LPJ_G0001901.1 mouse_genomes_project 6 43903895 43907576 + TEC TEC MGP_LPJ_T0080262.1 MGP_LPJ_G0031265.1 mouse_genomes_project 6 133877402 134212091 - MGP_LPJ_P0080262 protein_coding protein_coding MGP_LPJ_T0008733.1 MGP_LPJ_G0007058.1 mouse_genomes_project 6 121040798 121043148 + Gm30557 lincRNA lincRNA MGP_LPJ_T0000334.1 MGP_LPJ_G0000272.1 mouse_genomes_project 6 68672263 68674578 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0080447.1 MGP_LPJ_G0031333.1 mouse_genomes_project 6 141433171 141437798 - MGP_LPJ_P0080447 Smco3 protein_coding protein_coding MGP_LPJ_T0010786.1 MGP_LPJ_G0008904.1 mouse_genomes_project 6 47332959 47333033 + Gm24325 miRNA miRNA MGP_LPJ_T0002151.1 MGP_LPJ_G0002061.1 mouse_genomes_project 6 116288084 116288779 + TEC TEC MGP_LPJ_T0079070.1 MGP_LPJ_G0031016.1 mouse_genomes_project 6 115880669 115887788 + MGP_LPJ_P0079070 Ogg1 protein_coding protein_coding MGP_LPJ_T0079071.1 MGP_LPJ_G0031016.1 mouse_genomes_project 6 115880682 115882420 + Ogg1 protein_coding retained_intron MGP_LPJ_T0079072.1 MGP_LPJ_G0031016.1 mouse_genomes_project 6 115880696 115887784 + MGP_LPJ_P0079072 Ogg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0079073.1 MGP_LPJ_G0031016.1 mouse_genomes_project 6 115880705 115882927 + Ogg1 protein_coding processed_transcript MGP_LPJ_T0079074.1 MGP_LPJ_G0031016.1 mouse_genomes_project 6 115880710 115887582 + MGP_LPJ_P0079074 Ogg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0079075.1 MGP_LPJ_G0031016.1 mouse_genomes_project 6 115880808 115882551 + Ogg1 protein_coding retained_intron MGP_LPJ_T0079076.1 MGP_LPJ_G0031016.1 mouse_genomes_project 6 115886914 115888668 + Ogg1 protein_coding retained_intron MGP_LPJ_T0008633.1 MGP_LPJ_G0006978.1 mouse_genomes_project 6 60848916 60849605 - Gm43894 lincRNA lincRNA MGP_LPJ_T0078621.1 MGP_LPJ_G0030925.1 mouse_genomes_project 6 91493662 91494969 - MGP_LPJ_P0078621 protein_coding protein_coding MGP_LPJ_T0076841.1 MGP_LPJ_G0030499.1 mouse_genomes_project 6 37520652 37597216 - MGP_LPJ_P0076841 Kdm7a protein_coding protein_coding MGP_LPJ_T0076842.1 MGP_LPJ_G0030499.1 mouse_genomes_project 6 37526476 37540459 - Kdm7a protein_coding processed_transcript MGP_LPJ_T0015593.1 MGP_LPJ_G0013684.1 mouse_genomes_project 6 137031645 137031916 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002706.1 MGP_LPJ_G0002586.1 mouse_genomes_project 6 39548514 39548986 + MGP_LPJ_P0002706 Trbv5 TR_V_gene TR_V_gene MGP_LPJ_T0002712.1 MGP_LPJ_G0002591.1 mouse_genomes_project 6 39621671 39622110 + MGP_LPJ_P0002712 Trbv13-3 TR_V_gene TR_V_gene MGP_LPJ_T0077778.1 MGP_LPJ_G0030761.1 mouse_genomes_project 6 72125649 72233869 + MGP_LPJ_P0077778 Reep1 protein_coding protein_coding MGP_LPJ_T0015242.1 MGP_LPJ_G0013333.1 mouse_genomes_project 6 31389409 31390181 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005076.1 MGP_LPJ_G0004332.1 mouse_genomes_project 6 110850495 110857193 - Gm44040 antisense antisense MGP_LPJ_T0079626.1 MGP_LPJ_G0031112.1 mouse_genomes_project 6 124138359 124154254 + MGP_LPJ_P0079626 Tuba8 protein_coding protein_coding MGP_LPJ_T0005008.1 MGP_LPJ_G0004294.1 mouse_genomes_project 6 82993911 82996038 - Gm15864 antisense antisense MGP_LPJ_T0076102.1 MGP_LPJ_G0030361.1 mouse_genomes_project 6 9306499 9749878 - MGP_LPJ_P0076102 Thsd7a protein_coding protein_coding MGP_LPJ_T0076103.1 MGP_LPJ_G0030361.1 mouse_genomes_project 6 9312358 9750035 - MGP_LPJ_P0076103 Thsd7a protein_coding protein_coding MGP_LPJ_T0076104.1 MGP_LPJ_G0030361.1 mouse_genomes_project 6 9312398 9313601 - Thsd7a protein_coding retained_intron MGP_LPJ_T0076105.1 MGP_LPJ_G0030361.1 mouse_genomes_project 6 9312620 9409945 - Thsd7a protein_coding processed_transcript MGP_LPJ_T0076106.1 MGP_LPJ_G0030361.1 mouse_genomes_project 6 9316799 9320691 - Thsd7a protein_coding retained_intron MGP_LPJ_T0076107.1 MGP_LPJ_G0030361.1 mouse_genomes_project 6 9459650 9558953 - Thsd7a protein_coding processed_transcript MGP_LPJ_T0102217.1 MGP_LPJ_G0040254.1 mouse_genomes_project 6 40932209 40932351 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0079192.1 MGP_LPJ_G0031039.1 mouse_genomes_project 6 116864510 116905576 + MGP_LPJ_P0079192 Slc6a1 protein_coding protein_coding MGP_LPJ_T0079193.1 MGP_LPJ_G0031039.1 mouse_genomes_project 6 116864706 116891909 + Slc6a1 protein_coding retained_intron MGP_LPJ_T0079194.1 MGP_LPJ_G0031039.1 mouse_genomes_project 6 116864706 116898752 + Slc6a1 protein_coding retained_intron MGP_LPJ_T0079195.1 MGP_LPJ_G0031039.1 mouse_genomes_project 6 116883188 116885117 + Slc6a1 protein_coding processed_transcript MGP_LPJ_T0079196.1 MGP_LPJ_G0031039.1 mouse_genomes_project 6 116884409 116885117 + Slc6a1 protein_coding retained_intron MGP_LPJ_T0079197.1 MGP_LPJ_G0031039.1 mouse_genomes_project 6 116899508 116903779 + Slc6a1 protein_coding retained_intron MGP_LPJ_T0080238.1 MGP_LPJ_G0031253.1 mouse_genomes_project 6 133504498 133521531 - MGP_LPJ_P0080238 Klrk1 protein_coding protein_coding MGP_LPJ_T0080239.1 MGP_LPJ_G0031253.1 mouse_genomes_project 6 133508022 133520437 - MGP_LPJ_P0080239 Klrk1 protein_coding protein_coding MGP_LPJ_T0080240.1 MGP_LPJ_G0031253.1 mouse_genomes_project 6 133508068 133521508 - MGP_LPJ_P0080240 Klrk1 protein_coding protein_coding MGP_LPJ_T0080241.1 MGP_LPJ_G0031253.1 mouse_genomes_project 6 133513015 133520246 - Klrk1 protein_coding retained_intron MGP_LPJ_T0080242.1 MGP_LPJ_G0031253.1 mouse_genomes_project 6 133513090 133520349 - Klrk1 protein_coding retained_intron MGP_LPJ_T0080243.1 MGP_LPJ_G0031253.1 mouse_genomes_project 6 133518266 133521527 - Klrk1 protein_coding retained_intron MGP_LPJ_T0002590.1 MGP_LPJ_G0002488.1 mouse_genomes_project 6 40052074 40052127 + MGP_LPJ_P0002590 Trbj1-6 TR_J_gene TR_J_gene MGP_LPJ_T0079766.1 MGP_LPJ_G0031151.1 mouse_genomes_project 6 127894916 127931299 - MGP_LPJ_P0079766 Clstn3 protein_coding protein_coding MGP_LPJ_T0079767.1 MGP_LPJ_G0031151.1 mouse_genomes_project 6 127895469 127897669 - Clstn3 protein_coding processed_transcript MGP_LPJ_T0079768.1 MGP_LPJ_G0031151.1 mouse_genomes_project 6 127900937 127903045 - Clstn3 protein_coding retained_intron MGP_LPJ_T0079769.1 MGP_LPJ_G0031151.1 mouse_genomes_project 6 127903069 127917126 - Clstn3 protein_coding retained_intron MGP_LPJ_T0079770.1 MGP_LPJ_G0031151.1 mouse_genomes_project 6 127922707 127924656 - Clstn3 protein_coding processed_transcript MGP_LPJ_T0079771.1 MGP_LPJ_G0031151.1 mouse_genomes_project 6 127928424 127930916 - MGP_LPJ_P0079771 Clstn3 protein_coding protein_coding MGP_LPJ_T0077207.1 MGP_LPJ_G0030612.1 mouse_genomes_project 6 47654406 47660422 + MGP_LPJ_P0077207 Gimap7 protein_coding protein_coding MGP_LPJ_T0077209.1 MGP_LPJ_G0030612.1 mouse_genomes_project 6 47654442 47659525 + MGP_LPJ_P0077209 Gimap7 protein_coding protein_coding MGP_LPJ_T0077210.1 MGP_LPJ_G0030612.1 mouse_genomes_project 6 47654450 47655456 + Gimap7 protein_coding retained_intron MGP_LPJ_T0078215.1 MGP_LPJ_G0030843.1 mouse_genomes_project 6 85674758 85688545 - MGP_LPJ_P0078215 Cyp26b1 protein_coding protein_coding MGP_LPJ_T0078216.1 MGP_LPJ_G0030843.1 mouse_genomes_project 6 85674784 85688578 - MGP_LPJ_P0078216 Cyp26b1 protein_coding protein_coding MGP_LPJ_T0008789.1 MGP_LPJ_G0007099.1 mouse_genomes_project 6 150864059 150871634 - Gm15704 lincRNA lincRNA MGP_LPJ_T0076687.1 MGP_LPJ_G0030467.1 mouse_genomes_project 6 32996732 33066621 + Agbl3 protein_coding retained_intron MGP_LPJ_T0076688.1 MGP_LPJ_G0030467.1 mouse_genomes_project 6 32996732 33079170 + MGP_LPJ_P0076688 Agbl3 protein_coding protein_coding MGP_LPJ_T0076689.1 MGP_LPJ_G0030467.1 mouse_genomes_project 6 32996732 33079170 + MGP_LPJ_P0076689 Agbl3 protein_coding protein_coding MGP_LPJ_T0076690.1 MGP_LPJ_G0030467.1 mouse_genomes_project 6 32996742 33020605 + MGP_LPJ_P0076690 Agbl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0076691.1 MGP_LPJ_G0030467.1 mouse_genomes_project 6 32996752 33015100 + Agbl3 protein_coding retained_intron MGP_LPJ_T0076692.1 MGP_LPJ_G0030467.1 mouse_genomes_project 6 32997716 33080697 + MGP_LPJ_P0076692 Agbl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0076693.1 MGP_LPJ_G0030467.1 mouse_genomes_project 6 32997743 33022447 + Agbl3 protein_coding retained_intron MGP_LPJ_T0076694.1 MGP_LPJ_G0030467.1 mouse_genomes_project 6 32997743 33002588 + MGP_LPJ_P0076694 Agbl3 protein_coding protein_coding MGP_LPJ_T0076695.1 MGP_LPJ_G0030467.1 mouse_genomes_project 6 32997744 33017668 + Agbl3 protein_coding retained_intron MGP_LPJ_T0076696.1 MGP_LPJ_G0030467.1 mouse_genomes_project 6 32997757 33002513 + MGP_LPJ_P0076696 Agbl3 protein_coding protein_coding MGP_LPJ_T0076697.1 MGP_LPJ_G0030467.1 mouse_genomes_project 6 32997758 33002552 + MGP_LPJ_P0076697 Agbl3 protein_coding protein_coding MGP_LPJ_T0015588.1 MGP_LPJ_G0013679.1 mouse_genomes_project 6 136657659 136657894 - processed_pseudogene processed_pseudogene MGP_LPJ_T0080287.1 MGP_LPJ_G0031275.1 mouse_genomes_project 6 135937213 135938303 - MGP_LPJ_P0080287 Tas2r130 protein_coding protein_coding MGP_LPJ_T0077407.1 MGP_LPJ_G0030659.1 mouse_genomes_project 6 53092859 53098221 - MGP_LPJ_P0077407 Tril protein_coding protein_coding MGP_LPJ_T0002763.1 MGP_LPJ_G0002635.1 mouse_genomes_project 6 39710881 39711154 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0079681.1 MGP_LPJ_G0031124.1 mouse_genomes_project 6 125749278 125758812 + MGP_LPJ_P0079681 Mfap5 protein_coding protein_coding MGP_LPJ_T0079682.1 MGP_LPJ_G0031124.1 mouse_genomes_project 6 125757019 125771992 + MGP_LPJ_P0079682 Mfap5 protein_coding protein_coding MGP_LPJ_T0079683.1 MGP_LPJ_G0031124.1 mouse_genomes_project 6 125757095 125771858 + MGP_LPJ_P0079683 Mfap5 protein_coding protein_coding MGP_LPJ_T0079684.1 MGP_LPJ_G0031124.1 mouse_genomes_project 6 125757112 125771564 + MGP_LPJ_P0079684 Mfap5 protein_coding protein_coding MGP_LPJ_T0079685.1 MGP_LPJ_G0031124.1 mouse_genomes_project 6 125757779 125771657 + MGP_LPJ_P0079685 Mfap5 protein_coding protein_coding MGP_LPJ_T0079686.1 MGP_LPJ_G0031124.1 mouse_genomes_project 6 125765733 125771861 + Mfap5 protein_coding retained_intron MGP_LPJ_T0076074.1 MGP_LPJ_G0030357.1 mouse_genomes_project 6 5529550 5679855 - MGP_LPJ_P0076074 Ica1 protein_coding protein_coding MGP_LPJ_T0076075.1 MGP_LPJ_G0030357.1 mouse_genomes_project 6 5529550 5679900 - MGP_LPJ_P0076075 Ica1 protein_coding protein_coding MGP_LPJ_T0076076.1 MGP_LPJ_G0030357.1 mouse_genomes_project 6 5529550 5679570 - MGP_LPJ_P0076076 Ica1 protein_coding protein_coding MGP_LPJ_T0076077.1 MGP_LPJ_G0030357.1 mouse_genomes_project 6 5529550 5657586 - MGP_LPJ_P0076077 Ica1 protein_coding nonsense_mediated_decay MGP_LPJ_T0076078.1 MGP_LPJ_G0030357.1 mouse_genomes_project 6 5529722 5545369 - Ica1 protein_coding processed_transcript MGP_LPJ_T0076079.1 MGP_LPJ_G0030357.1 mouse_genomes_project 6 5555758 5679570 - MGP_LPJ_P0076079 Ica1 protein_coding protein_coding MGP_LPJ_T0076080.1 MGP_LPJ_G0030357.1 mouse_genomes_project 6 5556483 5569777 - MGP_LPJ_P0076080 Ica1 protein_coding protein_coding MGP_LPJ_T0076081.1 MGP_LPJ_G0030357.1 mouse_genomes_project 6 5556493 5679903 - MGP_LPJ_P0076081 Ica1 protein_coding protein_coding MGP_LPJ_T0076082.1 MGP_LPJ_G0030357.1 mouse_genomes_project 6 5556494 5634157 - MGP_LPJ_P0076082 Ica1 protein_coding protein_coding MGP_LPJ_T0076083.1 MGP_LPJ_G0030357.1 mouse_genomes_project 6 5627502 5679904 - Ica1 protein_coding processed_transcript MGP_LPJ_T0076084.1 MGP_LPJ_G0030357.1 mouse_genomes_project 6 5648916 5671946 - MGP_LPJ_P0076084 Ica1 protein_coding protein_coding MGP_LPJ_T0076085.1 MGP_LPJ_G0030357.1 mouse_genomes_project 6 5653819 5679539 - MGP_LPJ_P0076085 Ica1 protein_coding protein_coding MGP_LPJ_T0079660.1 MGP_LPJ_G0031122.1 mouse_genomes_project 6 125548260 125567564 - MGP_LPJ_P0079660 Phc1 protein_coding protein_coding MGP_LPJ_T0079661.1 MGP_LPJ_G0031122.1 mouse_genomes_project 6 125548279 125570204 - MGP_LPJ_P0079661 Phc1 protein_coding protein_coding MGP_LPJ_T0079662.1 MGP_LPJ_G0031122.1 mouse_genomes_project 6 125548379 125570197 - MGP_LPJ_P0079662 Phc1 protein_coding protein_coding MGP_LPJ_T0079663.1 MGP_LPJ_G0031122.1 mouse_genomes_project 6 125548832 125570164 - Phc1 protein_coding retained_intron MGP_LPJ_T0079664.1 MGP_LPJ_G0031122.1 mouse_genomes_project 6 125548832 125570164 - MGP_LPJ_P0079664 Phc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0079665.1 MGP_LPJ_G0031122.1 mouse_genomes_project 6 125548833 125570898 - MGP_LPJ_P0079665 Phc1 protein_coding protein_coding MGP_LPJ_T0079666.1 MGP_LPJ_G0031122.1 mouse_genomes_project 6 125549023 125570135 - MGP_LPJ_P0079666 Phc1 protein_coding unknown_likely_coding MGP_LPJ_T0079667.1 MGP_LPJ_G0031122.1 mouse_genomes_project 6 125556081 125567468 - MGP_LPJ_P0079667 Phc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0079668.1 MGP_LPJ_G0031122.1 mouse_genomes_project 6 125556473 125570843 - MGP_LPJ_P0079668 Phc1 protein_coding protein_coding MGP_LPJ_T0079669.1 MGP_LPJ_G0031122.1 mouse_genomes_project 6 125563219 125565693 - Phc1 protein_coding retained_intron MGP_LPJ_T0079670.1 MGP_LPJ_G0031122.1 mouse_genomes_project 6 125563942 125570561 - MGP_LPJ_P0079670 Phc1 protein_coding protein_coding MGP_LPJ_T0079671.1 MGP_LPJ_G0031122.1 mouse_genomes_project 6 125564681 125570204 - MGP_LPJ_P0079671 Phc1 protein_coding protein_coding MGP_LPJ_T0079672.1 MGP_LPJ_G0031122.1 mouse_genomes_project 6 125564682 125567845 - MGP_LPJ_P0079672 Phc1 protein_coding protein_coding MGP_LPJ_T0079673.1 MGP_LPJ_G0031122.1 mouse_genomes_project 6 125564686 125570179 - MGP_LPJ_P0079673 Phc1 protein_coding protein_coding MGP_LPJ_T0080248.1 MGP_LPJ_G0031256.1 mouse_genomes_project 6 133545966 133561113 - MGP_LPJ_P0080248 Klrc1 protein_coding protein_coding MGP_LPJ_T0080249.1 MGP_LPJ_G0031256.1 mouse_genomes_project 6 133556964 133561068 - MGP_LPJ_P0080249 Klrc1 protein_coding protein_coding MGP_LPJ_T0080250.1 MGP_LPJ_G0031256.1 mouse_genomes_project 6 133556965 133561113 - MGP_LPJ_P0080250 Klrc1 protein_coding protein_coding MGP_LPJ_T0080251.1 MGP_LPJ_G0031256.1 mouse_genomes_project 6 133556989 133561050 - MGP_LPJ_P0080251 Klrc1 protein_coding protein_coding MGP_LPJ_T0002052.1 MGP_LPJ_G0001962.1 mouse_genomes_project 6 78262285 78265521 - TEC TEC MGP_LPJ_T0005113.1 MGP_LPJ_G0004363.1 mouse_genomes_project 6 130745787 130812345 + 9330179D12Rik antisense antisense MGP_LPJ_T0005114.1 MGP_LPJ_G0004363.1 mouse_genomes_project 6 130746024 130812637 + 9330179D12Rik antisense antisense MGP_LPJ_T0076663.1 MGP_LPJ_G0030464.1 mouse_genomes_project 6 32624950 32635774 + MGP_LPJ_P0076663 Akr1b7 protein_coding protein_coding MGP_LPJ_T0015380.1 MGP_LPJ_G0013471.1 mouse_genomes_project 6 70309783 70310769 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015577.1 MGP_LPJ_G0013668.1 mouse_genomes_project 6 134626074 134626195 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101457.1 MGP_LPJ_G0039616.1 mouse_genomes_project 6 47419759 47439885 + transcribed_unitary_pseudogene processed_transcript MGP_LPJ_T0101458.1 MGP_LPJ_G0039616.1 mouse_genomes_project 6 47419810 47450305 + transcribed_unitary_pseudogene processed_transcript MGP_LPJ_T0101459.1 MGP_LPJ_G0039616.1 mouse_genomes_project 6 47424070 47445913 + transcribed_unitary_pseudogene transcribed_unitary_pseudogene MGP_LPJ_T0101460.1 MGP_LPJ_G0039616.1 mouse_genomes_project 6 47428188 47447977 + transcribed_unitary_pseudogene processed_transcript MGP_LPJ_T0005010.1 MGP_LPJ_G0004296.1 mouse_genomes_project 6 83738070 83741084 + Gm17034 antisense antisense MGP_LPJ_T0080329.1 MGP_LPJ_G0031308.1 mouse_genomes_project 6 138766984 138809677 + MGP_LPJ_P0080329 Bcl2l14 protein_coding protein_coding MGP_LPJ_T0080330.1 MGP_LPJ_G0031308.1 mouse_genomes_project 6 138767011 138774017 + Bcl2l14 protein_coding processed_transcript MGP_LPJ_T0080331.1 MGP_LPJ_G0031308.1 mouse_genomes_project 6 138769313 138809665 + MGP_LPJ_P0080331 Bcl2l14 protein_coding protein_coding MGP_LPJ_T0080332.1 MGP_LPJ_G0031308.1 mouse_genomes_project 6 138769325 138794512 + MGP_LPJ_P0080332 Bcl2l14 protein_coding protein_coding MGP_LPJ_T0080333.1 MGP_LPJ_G0031308.1 mouse_genomes_project 6 138784970 138809056 + MGP_LPJ_P0080333 Bcl2l14 protein_coding protein_coding MGP_LPJ_T0080334.1 MGP_LPJ_G0031308.1 mouse_genomes_project 6 138785007 138799022 + Bcl2l14 protein_coding retained_intron MGP_LPJ_T0079440.1 MGP_LPJ_G0031086.1 mouse_genomes_project 6 121278087 121342898 - MGP_LPJ_P0079440 Ankrd26 protein_coding protein_coding MGP_LPJ_T0079441.1 MGP_LPJ_G0031086.1 mouse_genomes_project 6 121296112 121301166 - Ankrd26 protein_coding retained_intron MGP_LPJ_T0079442.1 MGP_LPJ_G0031086.1 mouse_genomes_project 6 121321364 121327549 - Ankrd26 protein_coding retained_intron MGP_LPJ_T0000202.1 MGP_LPJ_G0000151.1 mouse_genomes_project 6 69637203 69637697 - MGP_LPJ_P0000202 Igkv4-70 IG_V_gene IG_V_gene MGP_LPJ_T0004987.1 MGP_LPJ_G0004276.1 mouse_genomes_project 6 53433873 53437918 - 9530036M11Rik antisense antisense MGP_LPJ_T0005006.1 MGP_LPJ_G0004292.1 mouse_genomes_project 6 73527371 73535438 + Gm44031 antisense antisense MGP_LPJ_T0015367.1 MGP_LPJ_G0013458.1 mouse_genomes_project 6 67522763 67524019 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005119.1 MGP_LPJ_G0004368.1 mouse_genomes_project 6 132167824 132206809 + Gm10069 antisense antisense MGP_LPJ_T0005120.1 MGP_LPJ_G0004368.1 mouse_genomes_project 6 132168406 132237408 + Gm10069 antisense antisense MGP_LPJ_T0005121.1 MGP_LPJ_G0004368.1 mouse_genomes_project 6 132204777 132221517 + Gm10069 antisense antisense MGP_LPJ_T0078764.1 MGP_LPJ_G0030957.1 mouse_genomes_project 6 93832686 93835273 - MGP_LPJ_P0078764 Trh protein_coding protein_coding MGP_LPJ_T0015497.1 MGP_LPJ_G0013588.1 mouse_genomes_project 6 115519456 115519583 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015563.1 MGP_LPJ_G0013654.1 mouse_genomes_project 6 132268615 132269021 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000207.1 MGP_LPJ_G0000156.1 mouse_genomes_project 6 69884433 69884999 - MGP_LPJ_P0000207 Igkv5-48 IG_V_gene IG_V_gene MGP_LPJ_T0078726.1 MGP_LPJ_G0030950.1 mouse_genomes_project 6 93335867 93370182 - MGP_LPJ_P0078726 Grip2 protein_coding unknown_likely_coding MGP_LPJ_T0078727.1 MGP_LPJ_G0030950.1 mouse_genomes_project 6 93335871 93381399 - MGP_LPJ_P0078727 Grip2 protein_coding protein_coding MGP_LPJ_T0078728.1 MGP_LPJ_G0030950.1 mouse_genomes_project 6 93335871 93403831 - MGP_LPJ_P0078728 Grip2 protein_coding nonsense_mediated_decay MGP_LPJ_T0078729.1 MGP_LPJ_G0030950.1 mouse_genomes_project 6 93337810 93381261 - MGP_LPJ_P0078729 Grip2 protein_coding protein_coding MGP_LPJ_T0078730.1 MGP_LPJ_G0030950.1 mouse_genomes_project 6 93357558 93381336 - MGP_LPJ_P0078730 Grip2 protein_coding nonsense_mediated_decay MGP_LPJ_T0078731.1 MGP_LPJ_G0030950.1 mouse_genomes_project 6 93358625 93370187 - MGP_LPJ_P0078731 Grip2 protein_coding nonsense_mediated_decay MGP_LPJ_T0078732.1 MGP_LPJ_G0030950.1 mouse_genomes_project 6 93366648 93370203 - Grip2 protein_coding retained_intron MGP_LPJ_T0076782.1 MGP_LPJ_G0030486.1 mouse_genomes_project 6 36445036 36452483 + MGP_LPJ_P0076782 Tmem213 protein_coding protein_coding MGP_LPJ_T0077779.1 MGP_LPJ_G0030762.1 mouse_genomes_project 6 72236155 72246969 - MGP_LPJ_P0077779 Mrpl35 protein_coding protein_coding MGP_LPJ_T0077780.1 MGP_LPJ_G0030762.1 mouse_genomes_project 6 72239321 72246922 - MGP_LPJ_P0077780 Mrpl35 protein_coding nonsense_mediated_decay MGP_LPJ_T0077781.1 MGP_LPJ_G0030762.1 mouse_genomes_project 6 72240827 72250128 - Mrpl35 protein_coding processed_transcript MGP_LPJ_T0008706.1 MGP_LPJ_G0007035.1 mouse_genomes_project 6 102614482 102620406 + 1700049E22Rik lincRNA lincRNA MGP_LPJ_T0005093.1 MGP_LPJ_G0004344.1 mouse_genomes_project 6 118086430 118100853 - Gm44079 antisense antisense MGP_LPJ_T0099672.1 MGP_LPJ_G0037935.1 mouse_genomes_project 6 115569645 115569737 - Gm23244 snRNA snRNA MGP_LPJ_T0002755.1 MGP_LPJ_G0002627.1 mouse_genomes_project 6 39570819 39571104 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0015527.1 MGP_LPJ_G0013618.1 mouse_genomes_project 6 124481713 124481986 - processed_pseudogene processed_pseudogene MGP_LPJ_T0080264.1 MGP_LPJ_G0031267.1 mouse_genomes_project 6 133901691 134212092 - MGP_LPJ_P0080264 protein_coding protein_coding MGP_LPJ_T0008636.1 MGP_LPJ_G0006980.1 mouse_genomes_project 6 67488798 67513790 + Gm42889 lincRNA lincRNA MGP_LPJ_T0078702.1 MGP_LPJ_G0030946.1 mouse_genomes_project 6 93028378 93043139 + MGP_LPJ_P0078702 Tmem43 protein_coding protein_coding MGP_LPJ_T0078703.1 MGP_LPJ_G0030946.1 mouse_genomes_project 6 93028402 93032309 + Tmem43 protein_coding retained_intron MGP_LPJ_T0078704.1 MGP_LPJ_G0030946.1 mouse_genomes_project 6 93028426 93029151 + Tmem43 protein_coding processed_transcript MGP_LPJ_T0078705.1 MGP_LPJ_G0030946.1 mouse_genomes_project 6 93028434 93033816 + Tmem43 protein_coding retained_intron MGP_LPJ_T0078706.1 MGP_LPJ_G0030946.1 mouse_genomes_project 6 93031275 93032933 + Tmem43 protein_coding processed_transcript MGP_LPJ_T0077996.1 MGP_LPJ_G0030807.1 mouse_genomes_project 6 84026526 84029064 - MGP_LPJ_P0077996 Dok1 protein_coding protein_coding MGP_LPJ_T0077997.1 MGP_LPJ_G0030807.1 mouse_genomes_project 6 84026532 84029061 - MGP_LPJ_P0077997 Dok1 protein_coding nonsense_mediated_decay MGP_LPJ_T0077998.1 MGP_LPJ_G0030807.1 mouse_genomes_project 6 84027443 84028154 - MGP_LPJ_P0077998 Dok1 protein_coding protein_coding MGP_LPJ_T0008627.1 MGP_LPJ_G0006973.1 mouse_genomes_project 6 56771850 58055584 - lincRNA lincRNA MGP_LPJ_T0005132.1 MGP_LPJ_G0004379.1 mouse_genomes_project 6 140641804 140645749 + Gm26653 antisense antisense MGP_LPJ_T0015459.1 MGP_LPJ_G0013550.1 mouse_genomes_project 6 97840440 97840807 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015622.1 MGP_LPJ_G0013713.1 mouse_genomes_project 6 151877288 151889903 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008735.1 MGP_LPJ_G0007060.1 mouse_genomes_project 6 122740272 122746780 - 4930540M05Rik lincRNA lincRNA MGP_LPJ_T0002002.1 MGP_LPJ_G0001912.1 mouse_genomes_project 6 44794388 44796510 + TEC TEC MGP_LPJ_T0080646.1 MGP_LPJ_G0031374.1 mouse_genomes_project 6 147704569 147723645 + MGP_LPJ_P0080646 Cmas protein_coding protein_coding MGP_LPJ_T0080647.1 MGP_LPJ_G0031374.1 mouse_genomes_project 6 147704637 147718492 + MGP_LPJ_P0080647 Cmas protein_coding nonsense_mediated_decay MGP_LPJ_T0080648.1 MGP_LPJ_G0031374.1 mouse_genomes_project 6 147704647 147722590 + MGP_LPJ_P0080648 Cmas protein_coding nonsense_mediated_decay MGP_LPJ_T0080649.1 MGP_LPJ_G0031374.1 mouse_genomes_project 6 147704658 147720145 + MGP_LPJ_P0080649 Cmas protein_coding nonsense_mediated_decay MGP_LPJ_T0080650.1 MGP_LPJ_G0031374.1 mouse_genomes_project 6 147717900 147719236 + Cmas protein_coding retained_intron MGP_LPJ_T0015258.1 MGP_LPJ_G0013349.1 mouse_genomes_project 6 38284691 38285775 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101379.1 MGP_LPJ_G0039571.1 mouse_genomes_project 6 40580556 40581405 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101380.1 MGP_LPJ_G0039571.1 mouse_genomes_project 6 40580964 40581324 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0002015.1 MGP_LPJ_G0001925.1 mouse_genomes_project 6 51834947 51838692 - TEC TEC MGP_LPJ_T0077539.1 MGP_LPJ_G0030689.1 mouse_genomes_project 6 56399468 56400532 + MGP_LPJ_P0077539 Vmn1r6 protein_coding protein_coding MGP_LPJ_T0002137.1 MGP_LPJ_G0002047.1 mouse_genomes_project 6 104049800 104052463 + TEC TEC MGP_LPJ_T0008600.1 MGP_LPJ_G0006953.1 mouse_genomes_project 6 49082542 49157861 + Gm3455 lincRNA lincRNA MGP_LPJ_T0004996.1 MGP_LPJ_G0004285.1 mouse_genomes_project 6 67098472 67099315 - antisense antisense MGP_LPJ_T0079700.1 MGP_LPJ_G0031128.1 mouse_genomes_project 6 125882433 125886222 + MGP_LPJ_P0079700 Dppa3 protein_coding protein_coding MGP_LPJ_T0079701.1 MGP_LPJ_G0031128.1 mouse_genomes_project 6 125882707 125886222 + MGP_LPJ_P0079701 Dppa3 protein_coding protein_coding MGP_LPJ_T0078063.1 MGP_LPJ_G0030820.1 mouse_genomes_project 6 84121275 84124935 - MGP_LPJ_P0078063 Ino80b protein_coding nonsense_mediated_decay MGP_LPJ_T0078064.1 MGP_LPJ_G0030820.1 mouse_genomes_project 6 84121275 84124935 - MGP_LPJ_P0078064 Ino80b protein_coding protein_coding MGP_LPJ_T0078065.1 MGP_LPJ_G0030820.1 mouse_genomes_project 6 84121338 84124533 - MGP_LPJ_P0078065 Ino80b protein_coding protein_coding MGP_LPJ_T0078066.1 MGP_LPJ_G0030820.1 mouse_genomes_project 6 84123916 84124372 - Ino80b protein_coding retained_intron MGP_LPJ_T0077732.1 MGP_LPJ_G0030751.1 mouse_genomes_project 6 71517766 71534036 - MGP_LPJ_P0077732 Thnsl2 protein_coding protein_coding MGP_LPJ_T0077733.1 MGP_LPJ_G0030751.1 mouse_genomes_project 6 71517998 71533944 - MGP_LPJ_P0077733 Thnsl2 protein_coding protein_coding MGP_LPJ_T0077734.1 MGP_LPJ_G0030751.1 mouse_genomes_project 6 71518256 71521577 - MGP_LPJ_P0077734 Thnsl2 protein_coding protein_coding MGP_LPJ_T0077735.1 MGP_LPJ_G0030751.1 mouse_genomes_project 6 71521370 71533928 - Thnsl2 protein_coding processed_transcript MGP_LPJ_T0008739.1 MGP_LPJ_G0007064.1 mouse_genomes_project 6 127752459 127756639 + Gm43971 lincRNA lincRNA MGP_LPJ_T0078285.1 MGP_LPJ_G0030861.1 mouse_genomes_project 6 87060073 87061765 - MGP_LPJ_P0078285 Nat8 protein_coding protein_coding MGP_LPJ_T0079837.1 MGP_LPJ_G0031165.1 mouse_genomes_project 6 128250274 128260550 - MGP_LPJ_P0079837 Lrrc23 protein_coding protein_coding MGP_LPJ_T0079838.1 MGP_LPJ_G0031165.1 mouse_genomes_project 6 128250280 128260559 - MGP_LPJ_P0079838 Lrrc23 protein_coding protein_coding MGP_LPJ_T0079839.1 MGP_LPJ_G0031165.1 mouse_genomes_project 6 128251016 128255439 - Lrrc23 protein_coding retained_intron MGP_LPJ_T0079840.1 MGP_LPJ_G0031165.1 mouse_genomes_project 6 128259093 128260549 - MGP_LPJ_P0079840 Lrrc23 protein_coding protein_coding MGP_LPJ_T0079841.1 MGP_LPJ_G0031165.1 mouse_genomes_project 6 128259732 128260536 - MGP_LPJ_P0079841 Lrrc23 protein_coding protein_coding MGP_LPJ_T0099670.1 MGP_LPJ_G0037933.1 mouse_genomes_project 6 115024174 115024277 + Gm27944 snRNA snRNA MGP_LPJ_T0076569.1 MGP_LPJ_G0030448.1 mouse_genomes_project 6 28686175 28726100 - MGP_LPJ_P0076569 Cep41 protein_coding protein_coding MGP_LPJ_T0076570.1 MGP_LPJ_G0030448.1 mouse_genomes_project 6 28686177 28726044 - MGP_LPJ_P0076570 Cep41 protein_coding nonsense_mediated_decay MGP_LPJ_T0076571.1 MGP_LPJ_G0030448.1 mouse_genomes_project 6 28687096 28726046 - MGP_LPJ_P0076571 Cep41 protein_coding protein_coding MGP_LPJ_T0076572.1 MGP_LPJ_G0030448.1 mouse_genomes_project 6 28687097 28701937 - Cep41 protein_coding processed_transcript MGP_LPJ_T0076573.1 MGP_LPJ_G0030448.1 mouse_genomes_project 6 28688250 28689528 - Cep41 protein_coding retained_intron MGP_LPJ_T0076574.1 MGP_LPJ_G0030448.1 mouse_genomes_project 6 28691100 28693951 - Cep41 protein_coding retained_intron MGP_LPJ_T0076575.1 MGP_LPJ_G0030448.1 mouse_genomes_project 6 28693563 28725439 - MGP_LPJ_P0076575 Cep41 protein_coding protein_coding MGP_LPJ_T0076576.1 MGP_LPJ_G0030448.1 mouse_genomes_project 6 28698609 28726027 - MGP_LPJ_P0076576 Cep41 protein_coding protein_coding MGP_LPJ_T0076577.1 MGP_LPJ_G0030448.1 mouse_genomes_project 6 28698895 28713115 - MGP_LPJ_P0076577 Cep41 protein_coding protein_coding MGP_LPJ_T0076578.1 MGP_LPJ_G0030448.1 mouse_genomes_project 6 28711669 28726051 - MGP_LPJ_P0076578 Cep41 protein_coding protein_coding MGP_LPJ_T0080026.1 MGP_LPJ_G0031198.1 mouse_genomes_project 6 129063938 129112382 + MGP_LPJ_P0080026 Vwf protein_coding protein_coding MGP_LPJ_T0080027.1 MGP_LPJ_G0031198.1 mouse_genomes_project 6 129070126 129211686 + MGP_LPJ_P0080027 Vwf protein_coding protein_coding MGP_LPJ_T0080028.1 MGP_LPJ_G0031198.1 mouse_genomes_project 6 129070141 129124950 + Vwf protein_coding retained_intron MGP_LPJ_T0080029.1 MGP_LPJ_G0031198.1 mouse_genomes_project 6 129070141 129112679 + MGP_LPJ_P0080029 Vwf protein_coding protein_coding MGP_LPJ_T0080030.1 MGP_LPJ_G0031198.1 mouse_genomes_project 6 129085615 129098816 + Vwf protein_coding processed_transcript MGP_LPJ_T0080031.1 MGP_LPJ_G0031198.1 mouse_genomes_project 6 129123723 129164795 + Vwf protein_coding processed_transcript MGP_LPJ_T0080032.1 MGP_LPJ_G0031198.1 mouse_genomes_project 6 129155489 129159015 + Vwf protein_coding retained_intron MGP_LPJ_T0080033.1 MGP_LPJ_G0031198.1 mouse_genomes_project 6 129168209 129183838 + Vwf protein_coding retained_intron MGP_LPJ_T0080034.1 MGP_LPJ_G0031198.1 mouse_genomes_project 6 129171139 129211679 + MGP_LPJ_P0080034 Vwf protein_coding nonsense_mediated_decay MGP_LPJ_T0080035.1 MGP_LPJ_G0031198.1 mouse_genomes_project 6 129176801 129178498 + Vwf protein_coding retained_intron MGP_LPJ_T0080036.1 MGP_LPJ_G0031198.1 mouse_genomes_project 6 129210743 129211642 + Vwf protein_coding processed_transcript MGP_LPJ_T0076927.1 MGP_LPJ_G0030520.1 mouse_genomes_project 6 39077784 39078780 - MGP_LPJ_P0076927 Tas2r138 protein_coding protein_coding MGP_LPJ_T0000351.1 MGP_LPJ_G0000289.1 mouse_genomes_project 6 69904392 69904870 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0000153.1 MGP_LPJ_G0000113.1 mouse_genomes_project 6 67513152 67513802 + MGP_LPJ_P0000153 Igkv2-137 IG_V_gene IG_V_gene MGP_LPJ_T0015514.1 MGP_LPJ_G0013605.1 mouse_genomes_project 6 119698585 119698994 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005140.1 MGP_LPJ_G0004385.1 mouse_genomes_project 6 148179498 148200199 - 1700126G02Rik antisense antisense MGP_LPJ_T0080741.1 MGP_LPJ_G0031387.1 mouse_genomes_project 6 150872108 150946048 + MGP_LPJ_P0080741 Rassf8 protein_coding protein_coding MGP_LPJ_T0080742.1 MGP_LPJ_G0031387.1 mouse_genomes_project 6 150875918 150940157 + MGP_LPJ_P0080742 Rassf8 protein_coding protein_coding MGP_LPJ_T0080743.1 MGP_LPJ_G0031387.1 mouse_genomes_project 6 150932480 150942553 + MGP_LPJ_P0080743 Rassf8 protein_coding protein_coding MGP_LPJ_T0080744.1 MGP_LPJ_G0031387.1 mouse_genomes_project 6 150944912 150946043 + MGP_LPJ_P0080744 Rassf8 protein_coding protein_coding MGP_LPJ_T0077563.1 MGP_LPJ_G0030705.1 mouse_genomes_project 6 57139752 57146238 - MGP_LPJ_P0077563 Pyurf protein_coding protein_coding MGP_LPJ_T0001947.1 MGP_LPJ_G0001857.1 mouse_genomes_project 6 4263817 4266495 + TEC TEC MGP_LPJ_T0010831.1 MGP_LPJ_G0008949.1 mouse_genomes_project 6 128588642 128588705 + Mir7045 miRNA miRNA MGP_LPJ_T0000166.1 MGP_LPJ_G0000123.1 mouse_genomes_project 6 68019204 68289788 + MGP_LPJ_P0000166 Igkv1-110 IG_V_gene IG_V_gene MGP_LPJ_T0000232.1 MGP_LPJ_G0000175.1 mouse_genomes_project 6 70375311 70375622 - MGP_LPJ_P0000232 Igkv8-27 IG_V_gene IG_V_gene MGP_LPJ_T0000233.1 MGP_LPJ_G0000175.1 mouse_genomes_project 6 70375311 70375611 - MGP_LPJ_P0000233 Igkv8-27 IG_V_gene IG_V_gene MGP_LPJ_T0099677.1 MGP_LPJ_G0037940.1 mouse_genomes_project 6 126515779 126515861 - Gm22946 snRNA snRNA MGP_LPJ_T0002710.1 MGP_LPJ_G0002589.1 mouse_genomes_project 6 39611219 39611733 + MGP_LPJ_P0002710 Trbv12-2 TR_V_gene TR_V_gene MGP_LPJ_T0100924.1 MGP_LPJ_G0039187.1 mouse_genomes_project 6 127047314 127047446 + Gm25891 snoRNA snoRNA MGP_LPJ_T0015414.1 MGP_LPJ_G0013505.1 mouse_genomes_project 6 83938826 83939184 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015472.1 MGP_LPJ_G0013563.1 mouse_genomes_project 6 104216917 104217702 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000322.1 MGP_LPJ_G0000260.1 mouse_genomes_project 6 68202395 68203128 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0080828.1 MGP_LPJ_G0031403.1 mouse_genomes_project 6 152205739 152214646 - MGP_LPJ_P0080828 Mansc4 protein_coding protein_coding MGP_LPJ_T0080829.1 MGP_LPJ_G0031403.1 mouse_genomes_project 6 152209059 152214615 - MGP_LPJ_P0080829 Mansc4 protein_coding protein_coding MGP_LPJ_T0080289.1 MGP_LPJ_G0031277.1 mouse_genomes_project 6 135972241 135973168 - MGP_LPJ_P0080289 Tas2r106 protein_coding protein_coding MGP_LPJ_T0015297.1 MGP_LPJ_G0013388.1 mouse_genomes_project 6 48545269 48546015 - processed_pseudogene processed_pseudogene MGP_LPJ_T0077202.1 MGP_LPJ_G0030610.1 mouse_genomes_project 6 47636831 47643479 - MGP_LPJ_P0077202 Gimap6 protein_coding protein_coding MGP_LPJ_T0077203.1 MGP_LPJ_G0030610.1 mouse_genomes_project 6 47636832 47643467 - MGP_LPJ_P0077203 Gimap6 protein_coding protein_coding MGP_LPJ_T0077204.1 MGP_LPJ_G0030610.1 mouse_genomes_project 6 47638983 47643450 - MGP_LPJ_P0077204 Gimap6 protein_coding protein_coding MGP_LPJ_T0077205.1 MGP_LPJ_G0030610.1 mouse_genomes_project 6 47639671 47641486 - Gimap6 protein_coding processed_transcript MGP_LPJ_T0102226.1 MGP_LPJ_G0040263.1 mouse_genomes_project 6 56743600 56743958 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002179.1 MGP_LPJ_G0002088.1 mouse_genomes_project 6 133428454 133429145 + TEC TEC MGP_LPJ_T0008731.1 MGP_LPJ_G0007056.1 mouse_genomes_project 6 120646533 120646854 + Gm29509 lincRNA lincRNA MGP_LPJ_T0015492.1 MGP_LPJ_G0013583.1 mouse_genomes_project 6 112801082 112801657 + processed_pseudogene processed_pseudogene MGP_LPJ_T0080591.1 MGP_LPJ_G0031360.1 mouse_genomes_project 6 146724667 146782542 - MGP_LPJ_P0080591 Slco1a4 protein_coding protein_coding MGP_LPJ_T0080592.1 MGP_LPJ_G0031360.1 mouse_genomes_project 6 146725954 146771467 - MGP_LPJ_P0080592 Slco1a4 protein_coding protein_coding MGP_LPJ_T0080593.1 MGP_LPJ_G0031360.1 mouse_genomes_project 6 146759302 146782570 - MGP_LPJ_P0080593 Slco1a4 protein_coding protein_coding MGP_LPJ_T0080594.1 MGP_LPJ_G0031360.1 mouse_genomes_project 6 146777141 146780046 - Slco1a4 protein_coding retained_intron MGP_LPJ_T0015441.1 MGP_LPJ_G0013532.1 mouse_genomes_project 6 92978104 92980148 - processed_pseudogene processed_pseudogene MGP_LPJ_T0080012.1 MGP_LPJ_G0031194.1 mouse_genomes_project 6 128829132 128838880 + MGP_LPJ_P0080012 Scnn1a protein_coding protein_coding MGP_LPJ_T0080013.1 MGP_LPJ_G0031194.1 mouse_genomes_project 6 128829206 128852273 + MGP_LPJ_P0080013 Scnn1a protein_coding nonsense_mediated_decay MGP_LPJ_T0080014.1 MGP_LPJ_G0031194.1 mouse_genomes_project 6 128829448 128852496 + MGP_LPJ_P0080014 Scnn1a protein_coding protein_coding MGP_LPJ_T0080015.1 MGP_LPJ_G0031194.1 mouse_genomes_project 6 128829808 128851972 + MGP_LPJ_P0080015 Scnn1a protein_coding protein_coding MGP_LPJ_T0015332.1 MGP_LPJ_G0013423.1 mouse_genomes_project 6 62935514 62936205 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015618.1 MGP_LPJ_G0013709.1 mouse_genomes_project 6 148101064 148101533 - processed_pseudogene processed_pseudogene MGP_LPJ_T0077072.1 MGP_LPJ_G0030581.1 mouse_genomes_project 6 41912570 41918451 - MGP_LPJ_P0077072 Nobox protein_coding protein_coding MGP_LPJ_T0077073.1 MGP_LPJ_G0030581.1 mouse_genomes_project 6 41912596 41914032 - Nobox protein_coding processed_transcript MGP_LPJ_T0077074.1 MGP_LPJ_G0030581.1 mouse_genomes_project 6 41912794 41916133 - MGP_LPJ_P0077074 Nobox protein_coding protein_coding MGP_LPJ_T0080129.1 MGP_LPJ_G0031221.1 mouse_genomes_project 6 132087664 132093661 + Foxm1 protein_coding processed_transcript MGP_LPJ_T0080130.1 MGP_LPJ_G0031221.1 mouse_genomes_project 6 132087664 132100824 + MGP_LPJ_P0080130 Foxm1 protein_coding protein_coding MGP_LPJ_T0080131.1 MGP_LPJ_G0031221.1 mouse_genomes_project 6 132090403 132098644 + MGP_LPJ_P0080131 Foxm1 protein_coding protein_coding MGP_LPJ_T0080132.1 MGP_LPJ_G0031221.1 mouse_genomes_project 6 132090865 132098036 + MGP_LPJ_P0080132 Foxm1 protein_coding protein_coding MGP_LPJ_T0080133.1 MGP_LPJ_G0031221.1 mouse_genomes_project 6 132091985 132097549 + MGP_LPJ_P0080133 Foxm1 protein_coding protein_coding MGP_LPJ_T0080134.1 MGP_LPJ_G0031221.1 mouse_genomes_project 6 132092063 132096849 + Foxm1 protein_coding retained_intron MGP_LPJ_T0080135.1 MGP_LPJ_G0031221.1 mouse_genomes_project 6 132094138 132096049 + Foxm1 protein_coding retained_intron MGP_LPJ_T0080136.1 MGP_LPJ_G0031221.1 mouse_genomes_project 6 132095637 132097860 + Foxm1 protein_coding retained_intron MGP_LPJ_T0000235.1 MGP_LPJ_G0000176.1 mouse_genomes_project 6 70375311 70375773 - MGP_LPJ_P0000235 IG_V_gene IG_V_gene MGP_LPJ_T0076086.1 MGP_LPJ_G0030358.1 mouse_genomes_project 6 5855577 5859698 + Nxph1 protein_coding processed_transcript MGP_LPJ_T0076087.1 MGP_LPJ_G0030358.1 mouse_genomes_project 6 5855760 6177776 + MGP_LPJ_P0076087 Nxph1 protein_coding protein_coding MGP_LPJ_T0076088.1 MGP_LPJ_G0030358.1 mouse_genomes_project 6 5856822 6177774 + MGP_LPJ_P0076088 Nxph1 protein_coding protein_coding MGP_LPJ_T0079674.1 MGP_LPJ_G0031123.1 mouse_genomes_project 6 125685891 125706840 - MGP_LPJ_P0079674 Rimklb protein_coding nonsense_mediated_decay MGP_LPJ_T0079675.1 MGP_LPJ_G0031123.1 mouse_genomes_project 6 125685893 125691326 - Rimklb protein_coding processed_transcript MGP_LPJ_T0079676.1 MGP_LPJ_G0031123.1 mouse_genomes_project 6 125691694 125728818 - MGP_LPJ_P0079676 Rimklb protein_coding protein_coding MGP_LPJ_T0079677.1 MGP_LPJ_G0031123.1 mouse_genomes_project 6 125692853 125706788 - MGP_LPJ_P0079677 Rimklb protein_coding protein_coding MGP_LPJ_T0079678.1 MGP_LPJ_G0031123.1 mouse_genomes_project 6 125699583 125712810 - Rimklb protein_coding processed_transcript MGP_LPJ_T0079679.1 MGP_LPJ_G0031123.1 mouse_genomes_project 6 125704418 125728752 - MGP_LPJ_P0079679 Rimklb protein_coding protein_coding MGP_LPJ_T0079680.1 MGP_LPJ_G0031123.1 mouse_genomes_project 6 125712793 125742135 - MGP_LPJ_P0079680 Rimklb protein_coding protein_coding MGP_LPJ_T0005077.1 MGP_LPJ_G0004333.1 mouse_genomes_project 6 110910475 110999066 - 0610040F04Rik antisense antisense MGP_LPJ_T0005078.1 MGP_LPJ_G0004333.1 mouse_genomes_project 6 110943752 110947412 - 0610040F04Rik antisense antisense MGP_LPJ_T0102252.1 MGP_LPJ_G0040289.1 mouse_genomes_project 6 91512713 91512951 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0001940.1 MGP_LPJ_G0001850.1 mouse_genomes_project 6 1715830 1719979 + TEC TEC MGP_LPJ_T0011674.1 MGP_LPJ_G0009792.1 mouse_genomes_project 6 89840813 89841138 + Gm25178 misc_RNA misc_RNA MGP_LPJ_T0015552.1 MGP_LPJ_G0013643.1 mouse_genomes_project 6 129896039 129896452 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002085.1 MGP_LPJ_G0001995.1 mouse_genomes_project 6 88683844 88684626 - TEC TEC MGP_LPJ_T0078434.1 MGP_LPJ_G0030887.1 mouse_genomes_project 6 88746679 88752355 - MGP_LPJ_P0078434 Gkn3 protein_coding protein_coding MGP_LPJ_T0002126.1 MGP_LPJ_G0002036.1 mouse_genomes_project 6 102307082 102309602 - TEC TEC MGP_LPJ_T0100939.1 MGP_LPJ_G0039202.1 mouse_genomes_project 6 149854157 149854290 - Gm22792 snoRNA snoRNA MGP_LPJ_T0078744.1 MGP_LPJ_G0030953.1 mouse_genomes_project 6 93561330 93659532 + MGP_LPJ_P0078744 Fgd5 protein_coding protein_coding MGP_LPJ_T0078745.1 MGP_LPJ_G0030953.1 mouse_genomes_project 6 93652352 93660930 + Fgd5 protein_coding retained_intron MGP_LPJ_T0078746.1 MGP_LPJ_G0030953.1 mouse_genomes_project 6 93656111 93659141 + Fgd5 protein_coding retained_intron MGP_LPJ_T0000178.1 MGP_LPJ_G0000132.1 mouse_genomes_project 6 68570796 68571575 + MGP_LPJ_P0000178 Igkv1-99 IG_V_gene IG_V_gene MGP_LPJ_T0000179.1 MGP_LPJ_G0000132.1 mouse_genomes_project 6 68570810 68571575 + MGP_LPJ_P0000179 Igkv1-99 IG_V_gene IG_V_gene MGP_LPJ_T0077408.1 MGP_LPJ_G0030660.1 mouse_genomes_project 6 53154346 53264383 - MGP_LPJ_P0077408 Cpvl protein_coding protein_coding MGP_LPJ_T0077409.1 MGP_LPJ_G0030660.1 mouse_genomes_project 6 53154446 53264374 - MGP_LPJ_P0077409 Cpvl protein_coding protein_coding MGP_LPJ_T0077410.1 MGP_LPJ_G0030660.1 mouse_genomes_project 6 53154446 53264374 - MGP_LPJ_P0077410 Cpvl protein_coding protein_coding MGP_LPJ_T0011650.1 MGP_LPJ_G0009768.1 mouse_genomes_project 6 44782896 44783200 + Gm22839 misc_RNA misc_RNA MGP_LPJ_T0078155.1 MGP_LPJ_G0030837.1 mouse_genomes_project 6 84798762 84804445 + MGP_LPJ_P0078155 Ankrd53 protein_coding protein_coding MGP_LPJ_T0078156.1 MGP_LPJ_G0030837.1 mouse_genomes_project 6 84798804 84804156 + MGP_LPJ_P0078156 Ankrd53 protein_coding protein_coding MGP_LPJ_T0000197.1 MGP_LPJ_G0000146.1 mouse_genomes_project 6 69605061 69605523 - MGP_LPJ_P0000197 Igkv4-80 IG_V_gene IG_V_gene MGP_LPJ_T0010793.1 MGP_LPJ_G0008911.1 mouse_genomes_project 6 70231639 70231749 - Gm23694 miRNA miRNA MGP_LPJ_T0002082.1 MGP_LPJ_G0001992.1 mouse_genomes_project 6 88497499 88499617 - TEC TEC MGP_LPJ_T0080341.1 MGP_LPJ_G0031310.1 mouse_genomes_project 6 138997977 139017849 - MGP_LPJ_P0080341 Mansc1 protein_coding protein_coding MGP_LPJ_T0079992.1 MGP_LPJ_G0031188.1 mouse_genomes_project 6 128689901 128691663 + Mrpl51 protein_coding processed_transcript MGP_LPJ_T0079993.1 MGP_LPJ_G0031188.1 mouse_genomes_project 6 128690265 128694382 + MGP_LPJ_P0079993 Mrpl51 protein_coding protein_coding MGP_LPJ_T0079994.1 MGP_LPJ_G0031188.1 mouse_genomes_project 6 128690317 128690979 + Mrpl51 protein_coding retained_intron MGP_LPJ_T0015362.1 MGP_LPJ_G0013453.1 mouse_genomes_project 6 67195953 67198006 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000201.1 MGP_LPJ_G0000150.1 mouse_genomes_project 6 69637203 69637696 - MGP_LPJ_P0000201 Igkv4-61 IG_V_gene IG_V_gene MGP_LPJ_T0102283.1 MGP_LPJ_G0040320.1 mouse_genomes_project 6 137738762 137740396 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008678.1 MGP_LPJ_G0007016.1 mouse_genomes_project 6 89608874 89611159 - Gm44246 lincRNA lincRNA MGP_LPJ_T0008647.1 MGP_LPJ_G0006991.1 mouse_genomes_project 6 73462797 73466809 + Gm26640 lincRNA lincRNA MGP_LPJ_T0002122.1 MGP_LPJ_G0002032.1 mouse_genomes_project 6 98989714 98993241 + TEC TEC MGP_LPJ_T0100902.1 MGP_LPJ_G0039165.1 mouse_genomes_project 6 72309502 72309639 - Gm22486 snoRNA snoRNA MGP_LPJ_T0102213.1 MGP_LPJ_G0040250.1 mouse_genomes_project 6 39510181 39510823 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008788.1 MGP_LPJ_G0007098.1 mouse_genomes_project 6 150397939 150403545 + 2010013B24Rik lincRNA lincRNA MGP_LPJ_T0102228.1 MGP_LPJ_G0040265.1 mouse_genomes_project 6 57327485 57327987 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0000335.1 MGP_LPJ_G0000273.1 mouse_genomes_project 6 68786027 68786752 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0015635.1 MGP_LPJ_G0013726.1 mouse_genomes_project 6 154665496 154666360 + processed_pseudogene processed_pseudogene MGP_LPJ_T0078505.1 MGP_LPJ_G0030903.1 mouse_genomes_project 6 89614366 89628247 + MGP_LPJ_P0078505 Gata2 protein_coding protein_coding MGP_LPJ_T0078506.1 MGP_LPJ_G0030903.1 mouse_genomes_project 6 89618806 89628245 + MGP_LPJ_P0078506 Gata2 protein_coding protein_coding MGP_LPJ_T0078507.1 MGP_LPJ_G0030903.1 mouse_genomes_project 6 89618806 89620135 + MGP_LPJ_P0078507 Gata2 protein_coding protein_coding MGP_LPJ_T0078508.1 MGP_LPJ_G0030903.1 mouse_genomes_project 6 89621390 89623113 + Gata2 protein_coding retained_intron MGP_LPJ_T0078509.1 MGP_LPJ_G0030903.1 mouse_genomes_project 6 89625659 89626986 + Gata2 protein_coding retained_intron MGP_LPJ_T0078307.1 MGP_LPJ_G0030865.1 mouse_genomes_project 6 87307364 87313603 + Figla protein_coding processed_transcript MGP_LPJ_T0078308.1 MGP_LPJ_G0030865.1 mouse_genomes_project 6 87310002 87313813 + MGP_LPJ_P0078308 Figla protein_coding protein_coding MGP_LPJ_T0002214.1 MGP_LPJ_G0002123.1 mouse_genomes_project 6 154067399 154069058 + TEC TEC MGP_LPJ_T0078539.1 MGP_LPJ_G0030909.1 mouse_genomes_project 6 90156476 90158049 + Mgll protein_coding processed_transcript MGP_LPJ_T0078540.1 MGP_LPJ_G0030909.1 mouse_genomes_project 6 90156487 90260747 + MGP_LPJ_P0078540 Mgll protein_coding nonsense_mediated_decay MGP_LPJ_T0078541.1 MGP_LPJ_G0030909.1 mouse_genomes_project 6 90156500 90264064 + MGP_LPJ_P0078541 Mgll protein_coding protein_coding MGP_LPJ_T0078542.1 MGP_LPJ_G0030909.1 mouse_genomes_project 6 90156602 90200501 + MGP_LPJ_P0078542 Mgll protein_coding protein_coding MGP_LPJ_T0078543.1 MGP_LPJ_G0030909.1 mouse_genomes_project 6 90157083 90263948 + MGP_LPJ_P0078543 Mgll protein_coding nonsense_mediated_decay MGP_LPJ_T0078544.1 MGP_LPJ_G0030909.1 mouse_genomes_project 6 90157157 90266440 + MGP_LPJ_P0078544 Mgll protein_coding protein_coding MGP_LPJ_T0078545.1 MGP_LPJ_G0030909.1 mouse_genomes_project 6 90260493 90263802 + Mgll protein_coding retained_intron MGP_LPJ_T0015433.1 MGP_LPJ_G0013524.1 mouse_genomes_project 6 87173686 87174530 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005099.1 MGP_LPJ_G0004350.1 mouse_genomes_project 6 123878361 123913255 + Gm43915 antisense antisense MGP_LPJ_T0079847.1 MGP_LPJ_G0031167.1 mouse_genomes_project 6 128288194 128289352 - Tpi1 protein_coding retained_intron MGP_LPJ_T0079848.1 MGP_LPJ_G0031167.1 mouse_genomes_project 6 128288536 128291976 - MGP_LPJ_P0079848 Tpi1 protein_coding protein_coding MGP_LPJ_T0079849.1 MGP_LPJ_G0031167.1 mouse_genomes_project 6 128288743 128291952 - MGP_LPJ_P0079849 Tpi1 protein_coding protein_coding MGP_LPJ_T0079850.1 MGP_LPJ_G0031167.1 mouse_genomes_project 6 128289914 128290520 - Tpi1 protein_coding retained_intron MGP_LPJ_T0079851.1 MGP_LPJ_G0031167.1 mouse_genomes_project 6 128290000 128291838 - Tpi1 protein_coding retained_intron MGP_LPJ_T0079852.1 MGP_LPJ_G0031167.1 mouse_genomes_project 6 128291143 128291834 - Tpi1 protein_coding retained_intron MGP_LPJ_T0102253.1 MGP_LPJ_G0040290.1 mouse_genomes_project 6 91512930 91513102 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0005030.1 MGP_LPJ_G0004306.1 mouse_genomes_project 6 87385527 87388254 - Gm44089 antisense antisense MGP_LPJ_T0010821.1 MGP_LPJ_G0008939.1 mouse_genomes_project 6 119362666 119362736 - Mir7043 miRNA miRNA MGP_LPJ_T0004986.1 MGP_LPJ_G0004275.1 mouse_genomes_project 6 53096133 53149257 + Gm43938 antisense antisense MGP_LPJ_T0076876.1 MGP_LPJ_G0030505.1 mouse_genomes_project 6 38008938 38020247 + MGP_LPJ_P0076876 protein_coding nonsense_mediated_decay MGP_LPJ_T0079077.1 MGP_LPJ_G0031017.1 mouse_genomes_project 6 115887723 115897528 - MGP_LPJ_P0079077 Camk1 protein_coding protein_coding MGP_LPJ_T0079078.1 MGP_LPJ_G0031017.1 mouse_genomes_project 6 115887727 115890221 - Camk1 protein_coding retained_intron MGP_LPJ_T0079079.1 MGP_LPJ_G0031017.1 mouse_genomes_project 6 115887736 115897448 - Camk1 protein_coding retained_intron MGP_LPJ_T0079080.1 MGP_LPJ_G0031017.1 mouse_genomes_project 6 115890481 115894448 - Camk1 protein_coding retained_intron MGP_LPJ_T0079081.1 MGP_LPJ_G0031017.1 mouse_genomes_project 6 115891653 115897522 - MGP_LPJ_P0079081 Camk1 protein_coding protein_coding MGP_LPJ_T0079082.1 MGP_LPJ_G0031017.1 mouse_genomes_project 6 115894433 115897507 - Camk1 protein_coding retained_intron MGP_LPJ_T0075982.1 MGP_LPJ_G0030335.1 mouse_genomes_project 6 1504639 1518412 + MGP_LPJ_P0075982 protein_coding protein_coding MGP_LPJ_T0075983.1 MGP_LPJ_G0030335.1 mouse_genomes_project 6 1504639 1518415 + MGP_LPJ_P0075983 protein_coding protein_coding MGP_LPJ_T0075984.1 MGP_LPJ_G0030335.1 mouse_genomes_project 6 1504739 1518415 + MGP_LPJ_P0075984 protein_coding protein_coding MGP_LPJ_T0077120.1 MGP_LPJ_G0030590.1 mouse_genomes_project 6 46725281 46746149 + MGP_LPJ_P0077120 Zfp212 protein_coding protein_coding MGP_LPJ_T0077121.1 MGP_LPJ_G0030590.1 mouse_genomes_project 6 46731112 46731953 + Zfp212 protein_coding retained_intron MGP_LPJ_T0098289.1 MGP_LPJ_G0036570.1 mouse_genomes_project 6 90725213 90725348 - Gm25961 rRNA rRNA MGP_LPJ_T0079114.1 MGP_LPJ_G0031024.1 mouse_genomes_project 6 116015402 116017516 + Il17re protein_coding retained_intron MGP_LPJ_T0079115.1 MGP_LPJ_G0031024.1 mouse_genomes_project 6 116015448 116027026 + MGP_LPJ_P0079115 Il17re protein_coding protein_coding MGP_LPJ_T0079116.1 MGP_LPJ_G0031024.1 mouse_genomes_project 6 116015475 116027002 + MGP_LPJ_P0079116 Il17re protein_coding protein_coding MGP_LPJ_T0079117.1 MGP_LPJ_G0031024.1 mouse_genomes_project 6 116015536 116026771 + MGP_LPJ_P0079117 Il17re protein_coding nonsense_mediated_decay MGP_LPJ_T0079118.1 MGP_LPJ_G0031024.1 mouse_genomes_project 6 116015536 116026771 + MGP_LPJ_P0079118 Il17re protein_coding protein_coding MGP_LPJ_T0079119.1 MGP_LPJ_G0031024.1 mouse_genomes_project 6 116021447 116027385 + Il17re protein_coding retained_intron MGP_LPJ_T0079120.1 MGP_LPJ_G0031024.1 mouse_genomes_project 6 116022987 116026615 + Il17re protein_coding retained_intron MGP_LPJ_T0015457.1 MGP_LPJ_G0013548.1 mouse_genomes_project 6 97043051 97047266 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015446.1 MGP_LPJ_G0013537.1 mouse_genomes_project 6 93871843 93872319 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008578.1 MGP_LPJ_G0006941.1 mouse_genomes_project 6 34480567 34668801 - lincRNA lincRNA MGP_LPJ_T0008579.1 MGP_LPJ_G0006941.1 mouse_genomes_project 6 34482925 34545085 - lincRNA lincRNA MGP_LPJ_T0008580.1 MGP_LPJ_G0006941.1 mouse_genomes_project 6 34538869 34669042 - lincRNA lincRNA MGP_LPJ_T0008581.1 MGP_LPJ_G0006941.1 mouse_genomes_project 6 34616301 34669184 - lincRNA lincRNA MGP_LPJ_T0008582.1 MGP_LPJ_G0006941.1 mouse_genomes_project 6 34668328 34669238 - lincRNA lincRNA MGP_LPJ_T0008583.1 MGP_LPJ_G0006941.1 mouse_genomes_project 6 34668330 34671141 - lincRNA lincRNA MGP_LPJ_T0008584.1 MGP_LPJ_G0006941.1 mouse_genomes_project 6 34668337 34669867 - lincRNA lincRNA MGP_LPJ_T0008585.1 MGP_LPJ_G0006941.1 mouse_genomes_project 6 34668615 34670377 - lincRNA lincRNA MGP_LPJ_T0008586.1 MGP_LPJ_G0006941.1 mouse_genomes_project 6 34668689 34670008 - lincRNA lincRNA MGP_LPJ_T0079950.1 MGP_LPJ_G0031182.1 mouse_genomes_project 6 128556478 128571003 + MGP_LPJ_P0079950 Lpar5 protein_coding protein_coding MGP_LPJ_T0079951.1 MGP_LPJ_G0031182.1 mouse_genomes_project 6 128559824 128570339 + MGP_LPJ_P0079951 Lpar5 protein_coding protein_coding MGP_LPJ_T0079952.1 MGP_LPJ_G0031182.1 mouse_genomes_project 6 128559824 128571003 + MGP_LPJ_P0079952 Lpar5 protein_coding protein_coding MGP_LPJ_T0015444.1 MGP_LPJ_G0013535.1 mouse_genomes_project 6 93754836 93756653 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099679.1 MGP_LPJ_G0037942.1 mouse_genomes_project 6 128456014 128456117 + Gm23851 snRNA snRNA MGP_LPJ_T0002169.1 MGP_LPJ_G0002078.1 mouse_genomes_project 6 130921078 130923304 + TEC TEC MGP_LPJ_T0015592.1 MGP_LPJ_G0013683.1 mouse_genomes_project 6 136761629 136762062 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099687.1 MGP_LPJ_G0037950.1 mouse_genomes_project 6 140963905 140963990 + Gm25882 snRNA snRNA MGP_LPJ_T0015322.1 MGP_LPJ_G0013413.1 mouse_genomes_project 6 59542984 59543974 + processed_pseudogene processed_pseudogene MGP_LPJ_T0077917.1 MGP_LPJ_G0030786.1 mouse_genomes_project 6 73765733 73797354 + MGP_LPJ_P0077917 Suclg1 protein_coding protein_coding MGP_LPJ_T0077918.1 MGP_LPJ_G0030786.1 mouse_genomes_project 6 73766003 73783514 + MGP_LPJ_P0077918 Suclg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0077919.1 MGP_LPJ_G0030786.1 mouse_genomes_project 6 73766011 73797347 + MGP_LPJ_P0077919 Suclg1 protein_coding protein_coding MGP_LPJ_T0077920.1 MGP_LPJ_G0030786.1 mouse_genomes_project 6 73766012 73774773 + Suclg1 protein_coding processed_transcript MGP_LPJ_T0077921.1 MGP_LPJ_G0030786.1 mouse_genomes_project 6 73766019 73782287 + Suclg1 protein_coding retained_intron MGP_LPJ_T0077922.1 MGP_LPJ_G0030786.1 mouse_genomes_project 6 73778511 73783510 + Suclg1 protein_coding retained_intron MGP_LPJ_T0015411.1 MGP_LPJ_G0013502.1 mouse_genomes_project 6 82781184 82781875 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008596.1 MGP_LPJ_G0006950.1 mouse_genomes_project 6 47697911 47700323 - Gm44226 lincRNA lincRNA MGP_LPJ_T0080553.1 MGP_LPJ_G0031353.1 mouse_genomes_project 6 145258324 145445703 + MGP_LPJ_P0080553 Plekha5 protein_coding protein_coding MGP_LPJ_T0080554.1 MGP_LPJ_G0031353.1 mouse_genomes_project 6 145258426 145435526 + MGP_LPJ_P0080554 Plekha5 protein_coding nonsense_mediated_decay MGP_LPJ_T0080555.1 MGP_LPJ_G0031353.1 mouse_genomes_project 6 145258427 145432714 + MGP_LPJ_P0080555 Plekha5 protein_coding protein_coding MGP_LPJ_T0080556.1 MGP_LPJ_G0031353.1 mouse_genomes_project 6 145267485 145392244 + MGP_LPJ_P0080556 Plekha5 protein_coding protein_coding MGP_LPJ_T0080557.1 MGP_LPJ_G0031353.1 mouse_genomes_project 6 145355388 145392245 + MGP_LPJ_P0080557 Plekha5 protein_coding protein_coding MGP_LPJ_T0080558.1 MGP_LPJ_G0031353.1 mouse_genomes_project 6 145363932 145432714 + MGP_LPJ_P0080558 Plekha5 protein_coding protein_coding MGP_LPJ_T0080559.1 MGP_LPJ_G0031353.1 mouse_genomes_project 6 145374241 145445703 + Plekha5 protein_coding processed_transcript MGP_LPJ_T0080560.1 MGP_LPJ_G0031353.1 mouse_genomes_project 6 145383249 145445703 + MGP_LPJ_P0080560 Plekha5 protein_coding nonsense_mediated_decay MGP_LPJ_T0080561.1 MGP_LPJ_G0031353.1 mouse_genomes_project 6 145383275 145397267 + Plekha5 protein_coding processed_transcript MGP_LPJ_T0080562.1 MGP_LPJ_G0031353.1 mouse_genomes_project 6 145383279 145445703 + MGP_LPJ_P0080562 Plekha5 protein_coding protein_coding MGP_LPJ_T0080563.1 MGP_LPJ_G0031353.1 mouse_genomes_project 6 145383414 145445703 + MGP_LPJ_P0080563 Plekha5 protein_coding protein_coding MGP_LPJ_T0080564.1 MGP_LPJ_G0031353.1 mouse_genomes_project 6 145407820 145445709 + MGP_LPJ_P0080564 Plekha5 protein_coding unknown_likely_coding MGP_LPJ_T0080565.1 MGP_LPJ_G0031353.1 mouse_genomes_project 6 145408652 145425414 + Plekha5 protein_coding retained_intron MGP_LPJ_T0080566.1 MGP_LPJ_G0031353.1 mouse_genomes_project 6 145422710 145425421 + Plekha5 protein_coding retained_intron MGP_LPJ_T0080567.1 MGP_LPJ_G0031353.1 mouse_genomes_project 6 145422898 145445703 + MGP_LPJ_P0080567 Plekha5 protein_coding protein_coding MGP_LPJ_T0080568.1 MGP_LPJ_G0031353.1 mouse_genomes_project 6 145427544 145430178 + Plekha5 protein_coding retained_intron MGP_LPJ_T0076442.1 MGP_LPJ_G0030429.1 mouse_genomes_project 6 27396778 27399558 + MGP_LPJ_P0076442 Atp6v1f protein_coding protein_coding MGP_LPJ_T0076443.1 MGP_LPJ_G0030429.1 mouse_genomes_project 6 27397128 27399558 + MGP_LPJ_P0076443 Atp6v1f protein_coding protein_coding MGP_LPJ_T0076444.1 MGP_LPJ_G0030429.1 mouse_genomes_project 6 27397128 27399558 + MGP_LPJ_P0076444 Atp6v1f protein_coding protein_coding MGP_LPJ_T0078575.1 MGP_LPJ_G0030913.1 mouse_genomes_project 6 90352634 90362599 + MGP_LPJ_P0078575 Tpra1 protein_coding protein_coding MGP_LPJ_T0078576.1 MGP_LPJ_G0030913.1 mouse_genomes_project 6 90352682 90359782 + Tpra1 protein_coding processed_transcript MGP_LPJ_T0078577.1 MGP_LPJ_G0030913.1 mouse_genomes_project 6 90352700 90356481 + Tpra1 protein_coding retained_intron MGP_LPJ_T0078578.1 MGP_LPJ_G0030913.1 mouse_genomes_project 6 90352700 90356948 + Tpra1 protein_coding processed_transcript MGP_LPJ_T0078579.1 MGP_LPJ_G0030913.1 mouse_genomes_project 6 90352716 90362599 + MGP_LPJ_P0078579 Tpra1 protein_coding protein_coding MGP_LPJ_T0078580.1 MGP_LPJ_G0030913.1 mouse_genomes_project 6 90352720 90360731 + Tpra1 protein_coding processed_transcript MGP_LPJ_T0078581.1 MGP_LPJ_G0030913.1 mouse_genomes_project 6 90352725 90360595 + MGP_LPJ_P0078581 Tpra1 protein_coding protein_coding MGP_LPJ_T0078582.1 MGP_LPJ_G0030913.1 mouse_genomes_project 6 90352735 90360579 + MGP_LPJ_P0078582 Tpra1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078583.1 MGP_LPJ_G0030913.1 mouse_genomes_project 6 90352836 90362599 + MGP_LPJ_P0078583 Tpra1 protein_coding protein_coding MGP_LPJ_T0078584.1 MGP_LPJ_G0030913.1 mouse_genomes_project 6 90356017 90359669 + Tpra1 protein_coding processed_transcript MGP_LPJ_T0078585.1 MGP_LPJ_G0030913.1 mouse_genomes_project 6 90356329 90362599 + MGP_LPJ_P0078585 Tpra1 protein_coding protein_coding MGP_LPJ_T0078586.1 MGP_LPJ_G0030913.1 mouse_genomes_project 6 90356338 90358141 + Tpra1 protein_coding processed_transcript MGP_LPJ_T0078587.1 MGP_LPJ_G0030913.1 mouse_genomes_project 6 90356340 90362115 + MGP_LPJ_P0078587 Tpra1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078588.1 MGP_LPJ_G0030913.1 mouse_genomes_project 6 90356358 90361188 + MGP_LPJ_P0078588 Tpra1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078589.1 MGP_LPJ_G0030913.1 mouse_genomes_project 6 90356424 90361016 + MGP_LPJ_P0078589 Tpra1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078590.1 MGP_LPJ_G0030913.1 mouse_genomes_project 6 90358355 90362606 + MGP_LPJ_P0078590 Tpra1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078591.1 MGP_LPJ_G0030913.1 mouse_genomes_project 6 90358355 90362352 + MGP_LPJ_P0078591 Tpra1 protein_coding protein_coding MGP_LPJ_T0078592.1 MGP_LPJ_G0030913.1 mouse_genomes_project 6 90358369 90361469 + MGP_LPJ_P0078592 Tpra1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078593.1 MGP_LPJ_G0030913.1 mouse_genomes_project 6 90358568 90359895 + Tpra1 protein_coding processed_transcript MGP_LPJ_T0078594.1 MGP_LPJ_G0030913.1 mouse_genomes_project 6 90358568 90359911 + Tpra1 protein_coding retained_intron MGP_LPJ_T0078595.1 MGP_LPJ_G0030913.1 mouse_genomes_project 6 90360525 90361317 + Tpra1 protein_coding retained_intron MGP_LPJ_T0078596.1 MGP_LPJ_G0030913.1 mouse_genomes_project 6 90360590 90360866 + Tpra1 protein_coding retained_intron MGP_LPJ_T0078597.1 MGP_LPJ_G0030913.1 mouse_genomes_project 6 90360966 90362123 + Tpra1 protein_coding retained_intron MGP_LPJ_T0011683.1 MGP_LPJ_G0009801.1 mouse_genomes_project 6 125879171 125879283 + Gm26168 misc_RNA misc_RNA MGP_LPJ_T0080230.1 MGP_LPJ_G0031251.1 mouse_genomes_project 6 133467212 133478197 + MGP_LPJ_P0080230 Klre1 protein_coding protein_coding MGP_LPJ_T0080231.1 MGP_LPJ_G0031251.1 mouse_genomes_project 6 133467558 133478147 + MGP_LPJ_P0080231 Klre1 protein_coding nonsense_mediated_decay MGP_LPJ_T0080232.1 MGP_LPJ_G0031251.1 mouse_genomes_project 6 133472718 133478194 + Klre1 protein_coding retained_intron MGP_LPJ_T0079818.1 MGP_LPJ_G0031163.1 mouse_genomes_project 6 128221169 128228547 - MGP_LPJ_P0079818 protein_coding protein_coding MGP_LPJ_T0079819.1 MGP_LPJ_G0031163.1 mouse_genomes_project 6 128223797 128224251 - protein_coding processed_transcript MGP_LPJ_T0079820.1 MGP_LPJ_G0031163.1 mouse_genomes_project 6 128226344 128234680 - MGP_LPJ_P0079820 protein_coding protein_coding MGP_LPJ_T0080265.1 MGP_LPJ_G0031268.1 mouse_genomes_project 6 134226381 134275288 - MGP_LPJ_P0080265 Klra3 protein_coding protein_coding MGP_LPJ_T0005116.1 MGP_LPJ_G0004365.1 mouse_genomes_project 6 131584530 131596454 - Gm15870 antisense antisense MGP_LPJ_T0001962.1 MGP_LPJ_G0001872.1 mouse_genomes_project 6 25250863 25253714 - TEC TEC MGP_LPJ_T0010782.1 MGP_LPJ_G0008900.1 mouse_genomes_project 6 34975367 34975514 + Gm25111 miRNA miRNA MGP_LPJ_T0011636.1 MGP_LPJ_G0009754.1 mouse_genomes_project 6 7840643 7840735 + Gm27894 misc_RNA misc_RNA MGP_LPJ_T0015334.1 MGP_LPJ_G0013425.1 mouse_genomes_project 6 63918326 63918491 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015273.1 MGP_LPJ_G0013364.1 mouse_genomes_project 6 43508988 43509885 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002088.1 MGP_LPJ_G0001998.1 mouse_genomes_project 6 89178135 89181293 - TEC TEC MGP_LPJ_T0008673.1 MGP_LPJ_G0007011.1 mouse_genomes_project 6 88026295 88026900 - Gm44214 lincRNA lincRNA MGP_LPJ_T0078241.1 MGP_LPJ_G0030849.1 mouse_genomes_project 6 86487367 86528976 - MGP_LPJ_P0078241 protein_coding protein_coding MGP_LPJ_T0078242.1 MGP_LPJ_G0030849.1 mouse_genomes_project 6 86487372 86529046 - MGP_LPJ_P0078242 protein_coding protein_coding MGP_LPJ_T0078243.1 MGP_LPJ_G0030849.1 mouse_genomes_project 6 86490033 86494043 - protein_coding processed_transcript MGP_LPJ_T0004951.1 MGP_LPJ_G0004250.1 mouse_genomes_project 6 32342588 32364858 + Gm13856 antisense antisense MGP_LPJ_T0078740.1 MGP_LPJ_G0030952.1 mouse_genomes_project 6 93483606 93485510 + 4930590J08Rik protein_coding retained_intron MGP_LPJ_T0078741.1 MGP_LPJ_G0030952.1 mouse_genomes_project 6 93485030 93532402 + MGP_LPJ_P0078741 4930590J08Rik protein_coding protein_coding MGP_LPJ_T0078742.1 MGP_LPJ_G0030952.1 mouse_genomes_project 6 93496461 93532317 + MGP_LPJ_P0078742 4930590J08Rik protein_coding protein_coding MGP_LPJ_T0078743.1 MGP_LPJ_G0030952.1 mouse_genomes_project 6 93525940 93531707 + MGP_LPJ_P0078743 4930590J08Rik protein_coding protein_coding MGP_LPJ_T0079773.1 MGP_LPJ_G0031153.1 mouse_genomes_project 6 127979241 127996737 + MGP_LPJ_P0079773 protein_coding protein_coding MGP_LPJ_T0079288.1 MGP_LPJ_G0031057.1 mouse_genomes_project 6 118507941 118576955 + MGP_LPJ_P0079288 Ift122 protein_coding protein_coding MGP_LPJ_T0079289.1 MGP_LPJ_G0031057.1 mouse_genomes_project 6 118508001 118576945 + MGP_LPJ_P0079289 Ift122 protein_coding protein_coding MGP_LPJ_T0079290.1 MGP_LPJ_G0031057.1 mouse_genomes_project 6 118508051 118576948 + MGP_LPJ_P0079290 Ift122 protein_coding nonsense_mediated_decay MGP_LPJ_T0079291.1 MGP_LPJ_G0031057.1 mouse_genomes_project 6 118508059 118510556 + Ift122 protein_coding retained_intron MGP_LPJ_T0079292.1 MGP_LPJ_G0031057.1 mouse_genomes_project 6 118508106 118576587 + MGP_LPJ_P0079292 Ift122 protein_coding protein_coding MGP_LPJ_T0079293.1 MGP_LPJ_G0031057.1 mouse_genomes_project 6 118508116 118525555 + Ift122 protein_coding processed_transcript MGP_LPJ_T0079294.1 MGP_LPJ_G0031057.1 mouse_genomes_project 6 118527524 118537552 + Ift122 protein_coding processed_transcript MGP_LPJ_T0079295.1 MGP_LPJ_G0031057.1 mouse_genomes_project 6 118536136 118537557 + Ift122 protein_coding processed_transcript MGP_LPJ_T0079296.1 MGP_LPJ_G0031057.1 mouse_genomes_project 6 118537336 118539029 + Ift122 protein_coding retained_intron MGP_LPJ_T0079297.1 MGP_LPJ_G0031057.1 mouse_genomes_project 6 118544214 118549831 + Ift122 protein_coding retained_intron MGP_LPJ_T0079298.1 MGP_LPJ_G0031057.1 mouse_genomes_project 6 118549321 118576949 + Ift122 protein_coding processed_transcript MGP_LPJ_T0079299.1 MGP_LPJ_G0031057.1 mouse_genomes_project 6 118552842 118576950 + Ift122 protein_coding retained_intron MGP_LPJ_T0100892.1 MGP_LPJ_G0039155.1 mouse_genomes_project 6 57314842 57314971 - Gm25726 snoRNA snoRNA MGP_LPJ_T0005110.1 MGP_LPJ_G0004360.1 mouse_genomes_project 6 130406264 130409068 + Gm42574 antisense antisense MGP_LPJ_T0015214.1 MGP_LPJ_G0013305.1 mouse_genomes_project 6 15064773 15066022 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002036.1 MGP_LPJ_G0001946.1 mouse_genomes_project 6 72254061 72254687 - TEC TEC MGP_LPJ_T0100880.1 MGP_LPJ_G0039143.1 mouse_genomes_project 6 37393577 37393703 + Gm23010 snoRNA snoRNA MGP_LPJ_T0080181.1 MGP_LPJ_G0031236.1 mouse_genomes_project 6 132643141 132663720 - MGP_LPJ_P0080181 protein_coding protein_coding MGP_LPJ_T0080182.1 MGP_LPJ_G0031236.1 mouse_genomes_project 6 132643810 132663702 - MGP_LPJ_P0080182 protein_coding protein_coding MGP_LPJ_T0080183.1 MGP_LPJ_G0031236.1 mouse_genomes_project 6 132644329 132663679 - MGP_LPJ_P0080183 protein_coding protein_coding MGP_LPJ_T0080185.1 MGP_LPJ_G0031236.1 mouse_genomes_project 6 132656712 132663694 - MGP_LPJ_P0080185 protein_coding protein_coding MGP_LPJ_T0076253.1 MGP_LPJ_G0030386.1 mouse_genomes_project 6 19519191 19550120 + MGP_LPJ_P0076253 Ing3 protein_coding protein_coding MGP_LPJ_T0076254.1 MGP_LPJ_G0030386.1 mouse_genomes_project 6 19519269 19548612 + Ing3 protein_coding retained_intron MGP_LPJ_T0076255.1 MGP_LPJ_G0030386.1 mouse_genomes_project 6 19519274 19548213 + MGP_LPJ_P0076255 Ing3 protein_coding nonsense_mediated_decay MGP_LPJ_T0076256.1 MGP_LPJ_G0030386.1 mouse_genomes_project 6 19519277 19548985 + MGP_LPJ_P0076256 Ing3 protein_coding protein_coding MGP_LPJ_T0076257.1 MGP_LPJ_G0030386.1 mouse_genomes_project 6 19519290 19544146 + MGP_LPJ_P0076257 Ing3 protein_coding protein_coding MGP_LPJ_T0076258.1 MGP_LPJ_G0030386.1 mouse_genomes_project 6 19519305 19547808 + MGP_LPJ_P0076258 Ing3 protein_coding nonsense_mediated_decay MGP_LPJ_T0076259.1 MGP_LPJ_G0030386.1 mouse_genomes_project 6 19519640 19541622 + MGP_LPJ_P0076259 Ing3 protein_coding protein_coding MGP_LPJ_T0076260.1 MGP_LPJ_G0030386.1 mouse_genomes_project 6 19521677 19523877 + Ing3 protein_coding retained_intron MGP_LPJ_T0077902.1 MGP_LPJ_G0030781.1 mouse_genomes_project 6 73080634 73090696 - MGP_LPJ_P0077902 Tgoln1 protein_coding protein_coding MGP_LPJ_T0011666.1 MGP_LPJ_G0009784.1 mouse_genomes_project 6 51484574 51484935 + Gm27383 misc_RNA misc_RNA MGP_LPJ_T0002595.1 MGP_LPJ_G0002492.1 mouse_genomes_project 6 40060304 40060353 + MGP_LPJ_P0002595 Trbj2-3 TR_J_gene TR_J_gene MGP_LPJ_T0077896.1 MGP_LPJ_G0030780.1 mouse_genomes_project 6 73070677 73080628 + MGP_LPJ_P0077896 Retsat protein_coding protein_coding MGP_LPJ_T0077897.1 MGP_LPJ_G0030780.1 mouse_genomes_project 6 73070830 73079584 + MGP_LPJ_P0077897 Retsat protein_coding protein_coding MGP_LPJ_T0077898.1 MGP_LPJ_G0030780.1 mouse_genomes_project 6 73070830 73079584 + MGP_LPJ_P0077898 Retsat protein_coding protein_coding MGP_LPJ_T0077899.1 MGP_LPJ_G0030780.1 mouse_genomes_project 6 73076575 73078592 + Retsat protein_coding processed_transcript MGP_LPJ_T0077900.1 MGP_LPJ_G0030780.1 mouse_genomes_project 6 73078174 73079645 + MGP_LPJ_P0077900 Retsat protein_coding protein_coding MGP_LPJ_T0077901.1 MGP_LPJ_G0030780.1 mouse_genomes_project 6 73078847 73079414 + MGP_LPJ_P0077901 Retsat protein_coding protein_coding MGP_LPJ_T0000358.1 MGP_LPJ_G0000296.1 mouse_genomes_project 6 70489858 70490606 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0000056.1 MGP_LPJ_G0000045.1 mouse_genomes_project 6 41512868 41513329 + MGP_LPJ_P0000056 Gm17472 IG_LV_gene IG_LV_gene MGP_LPJ_T0080172.1 MGP_LPJ_G0031231.1 mouse_genomes_project 6 132435635 132437598 - MGP_LPJ_P0080172 protein_coding protein_coding MGP_LPJ_T0002033.1 MGP_LPJ_G0001943.1 mouse_genomes_project 6 71947716 71950899 - TEC TEC MGP_LPJ_T0015200.1 MGP_LPJ_G0013291.1 mouse_genomes_project 6 7869788 7875962 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011668.1 MGP_LPJ_G0009786.1 mouse_genomes_project 6 57019588 57019903 + Gm27896 misc_RNA misc_RNA MGP_LPJ_T0080083.1 MGP_LPJ_G0031211.1 mouse_genomes_project 6 130681986 130703448 - MGP_LPJ_P0080083 Tigar protein_coding protein_coding MGP_LPJ_T0080084.1 MGP_LPJ_G0031211.1 mouse_genomes_project 6 130685136 130703455 - MGP_LPJ_P0080084 Tigar protein_coding nonsense_mediated_decay MGP_LPJ_T0076225.1 MGP_LPJ_G0030380.1 mouse_genomes_project 6 15556689 15711571 + MGP_LPJ_P0076225 Cftr protein_coding nonsense_mediated_decay MGP_LPJ_T0076226.1 MGP_LPJ_G0030380.1 mouse_genomes_project 6 15556689 15711572 + MGP_LPJ_P0076226 Cftr protein_coding protein_coding MGP_LPJ_T0076227.1 MGP_LPJ_G0030380.1 mouse_genomes_project 6 15556689 15711571 + MGP_LPJ_P0076227 Cftr protein_coding nonsense_mediated_decay MGP_LPJ_T0076228.1 MGP_LPJ_G0030380.1 mouse_genomes_project 6 15556773 15625691 + MGP_LPJ_P0076228 Cftr protein_coding protein_coding MGP_LPJ_T0076229.1 MGP_LPJ_G0030380.1 mouse_genomes_project 6 15556826 15709842 + MGP_LPJ_P0076229 Cftr protein_coding protein_coding MGP_LPJ_T0076230.1 MGP_LPJ_G0030380.1 mouse_genomes_project 6 15644103 15653956 + Cftr protein_coding retained_intron MGP_LPJ_T0099644.1 MGP_LPJ_G0037907.1 mouse_genomes_project 6 37660039 37660138 - Gm26008 snRNA snRNA MGP_LPJ_T0078323.1 MGP_LPJ_G0030868.1 mouse_genomes_project 6 87681089 87685503 + MGP_LPJ_P0078323 Fam136a protein_coding protein_coding MGP_LPJ_T0078324.1 MGP_LPJ_G0030868.1 mouse_genomes_project 6 87681157 87682463 + Fam136a protein_coding retained_intron MGP_LPJ_T0078325.1 MGP_LPJ_G0030868.1 mouse_genomes_project 6 87681167 87684243 + MGP_LPJ_P0078325 Fam136a protein_coding nonsense_mediated_decay MGP_LPJ_T0015350.1 MGP_LPJ_G0013441.1 mouse_genomes_project 6 65854576 65855270 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000174.1 MGP_LPJ_G0000129.1 mouse_genomes_project 6 68468708 68469194 + MGP_LPJ_P0000174 Igkv15-103 IG_V_gene IG_V_gene MGP_LPJ_T0102271.1 MGP_LPJ_G0040308.1 mouse_genomes_project 6 135315589 135375992 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0000241.1 MGP_LPJ_G0000181.1 mouse_genomes_project 6 70720344 70722011 - MGP_LPJ_P0000241 Igkv6-17 IG_V_gene IG_V_gene MGP_LPJ_T0002762.1 MGP_LPJ_G0002634.1 mouse_genomes_project 6 39707299 39707766 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0008665.1 MGP_LPJ_G0007004.1 mouse_genomes_project 6 85295082 85366558 + Gm44127 lincRNA lincRNA MGP_LPJ_T0077695.1 MGP_LPJ_G0030742.1 mouse_genomes_project 6 66936628 66938939 - MGP_LPJ_P0077695 Gadd45a protein_coding protein_coding MGP_LPJ_T0077696.1 MGP_LPJ_G0030742.1 mouse_genomes_project 6 66936991 66938734 - Gadd45a protein_coding retained_intron MGP_LPJ_T0077697.1 MGP_LPJ_G0030742.1 mouse_genomes_project 6 66936991 66938897 - MGP_LPJ_P0077697 Gadd45a protein_coding protein_coding MGP_LPJ_T0077698.1 MGP_LPJ_G0030742.1 mouse_genomes_project 6 66936998 66938784 - MGP_LPJ_P0077698 Gadd45a protein_coding protein_coding MGP_LPJ_T0077699.1 MGP_LPJ_G0030742.1 mouse_genomes_project 6 66937111 66938719 - Gadd45a protein_coding retained_intron MGP_LPJ_T0077700.1 MGP_LPJ_G0030742.1 mouse_genomes_project 6 66937903 66938910 - Gadd45a protein_coding retained_intron MGP_LPJ_T0077701.1 MGP_LPJ_G0030742.1 mouse_genomes_project 6 66938429 66938990 - Gadd45a protein_coding retained_intron MGP_LPJ_T0015399.1 MGP_LPJ_G0013490.1 mouse_genomes_project 6 75825111 75825613 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100879.1 MGP_LPJ_G0039142.1 mouse_genomes_project 6 34235099 34235234 + Gm23273 snoRNA snoRNA MGP_LPJ_T0100888.1 MGP_LPJ_G0039151.1 mouse_genomes_project 6 53153084 53153216 - Gm22910 snoRNA snoRNA MGP_LPJ_T0100903.1 MGP_LPJ_G0039166.1 mouse_genomes_project 6 73658953 73659149 - Gm24533 snoRNA snoRNA MGP_LPJ_T0015616.1 MGP_LPJ_G0013707.1 mouse_genomes_project 6 147042043 147043108 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008740.1 MGP_LPJ_G0007065.1 mouse_genomes_project 6 127822483 127823690 - 1700027F06Rik lincRNA lincRNA MGP_LPJ_T0015365.1 MGP_LPJ_G0013456.1 mouse_genomes_project 6 67370739 67371321 - processed_pseudogene processed_pseudogene MGP_LPJ_T0078619.1 MGP_LPJ_G0030924.1 mouse_genomes_project 6 91419658 91427475 + MGP_LPJ_P0078619 Vmn1r46 protein_coding protein_coding MGP_LPJ_T0078620.1 MGP_LPJ_G0030924.1 mouse_genomes_project 6 91426518 91427448 + MGP_LPJ_P0078620 Vmn1r46 protein_coding protein_coding MGP_LPJ_T0078992.1 MGP_LPJ_G0031004.1 mouse_genomes_project 6 114773387 114829987 + MGP_LPJ_P0078992 Lmcd1 protein_coding protein_coding MGP_LPJ_T0078617.1 MGP_LPJ_G0030922.1 mouse_genomes_project 6 91348540 91349648 + MGP_LPJ_P0078617 Vmn1r44 protein_coding protein_coding MGP_LPJ_T0004969.1 MGP_LPJ_G0004265.1 mouse_genomes_project 6 41861452 41862768 - Gm44731 antisense antisense MGP_LPJ_T0001964.1 MGP_LPJ_G0001874.1 mouse_genomes_project 6 26072815 26079819 - TEC TEC MGP_LPJ_T0002074.1 MGP_LPJ_G0001984.1 mouse_genomes_project 6 87569587 87571947 - TEC TEC MGP_LPJ_T0076621.1 MGP_LPJ_G0030456.1 mouse_genomes_project 6 30277449 30737946 - MGP_LPJ_P0076621 Plxna4 protein_coding protein_coding MGP_LPJ_T0076622.1 MGP_LPJ_G0030456.1 mouse_genomes_project 6 30357598 30359025 - Plxna4 protein_coding retained_intron MGP_LPJ_T0008719.1 MGP_LPJ_G0007046.1 mouse_genomes_project 6 115470472 115472766 + Gm44081 lincRNA lincRNA MGP_LPJ_T0010829.1 MGP_LPJ_G0008947.1 mouse_genomes_project 6 128188638 128188710 - Mir141 miRNA miRNA MGP_LPJ_T0080429.1 MGP_LPJ_G0031328.1 mouse_genomes_project 6 141172987 141225578 - MGP_LPJ_P0080429 Plbd1 protein_coding protein_coding MGP_LPJ_T0080430.1 MGP_LPJ_G0031328.1 mouse_genomes_project 6 141174225 141225523 - Plbd1 protein_coding retained_intron MGP_LPJ_T0080431.1 MGP_LPJ_G0031328.1 mouse_genomes_project 6 141174798 141193644 - Plbd1 protein_coding retained_intron MGP_LPJ_T0080432.1 MGP_LPJ_G0031328.1 mouse_genomes_project 6 141201260 141225213 - MGP_LPJ_P0080432 Plbd1 protein_coding protein_coding MGP_LPJ_T0002588.1 MGP_LPJ_G0002486.1 mouse_genomes_project 6 40051331 40051382 + MGP_LPJ_P0002588 Trbj1-4 TR_J_gene TR_J_gene MGP_LPJ_T0076921.1 MGP_LPJ_G0030517.1 mouse_genomes_project 6 39018519 39019461 - MGP_LPJ_P0076921 Olfr461 protein_coding protein_coding MGP_LPJ_T0008542.1 MGP_LPJ_G0006916.1 mouse_genomes_project 6 28312594 28340384 + 1700095J07Rik lincRNA lincRNA MGP_LPJ_T0008543.1 MGP_LPJ_G0006916.1 mouse_genomes_project 6 28312610 28315758 + 1700095J07Rik lincRNA lincRNA MGP_LPJ_T0004964.1 MGP_LPJ_G0004261.1 mouse_genomes_project 6 38655849 38661772 - Gm26807 antisense antisense MGP_LPJ_T0002213.1 MGP_LPJ_G0002122.1 mouse_genomes_project 6 153586385 153591832 - TEC TEC MGP_LPJ_T0079622.1 MGP_LPJ_G0031111.1 mouse_genomes_project 6 124110378 124114018 + MGP_LPJ_P0079622 Pex26 protein_coding protein_coding MGP_LPJ_T0079623.1 MGP_LPJ_G0031111.1 mouse_genomes_project 6 124110465 124122749 + MGP_LPJ_P0079623 Pex26 protein_coding protein_coding MGP_LPJ_T0079624.1 MGP_LPJ_G0031111.1 mouse_genomes_project 6 124110474 124113658 + Pex26 protein_coding retained_intron MGP_LPJ_T0079625.1 MGP_LPJ_G0031111.1 mouse_genomes_project 6 124110841 124120179 + MGP_LPJ_P0079625 Pex26 protein_coding protein_coding MGP_LPJ_T0015363.1 MGP_LPJ_G0013454.1 mouse_genomes_project 6 67340924 67341848 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008692.1 MGP_LPJ_G0007025.1 mouse_genomes_project 6 92980122 92990462 - 4930471M09Rik lincRNA lincRNA MGP_LPJ_T0008693.1 MGP_LPJ_G0007025.1 mouse_genomes_project 6 92988529 92990520 - 4930471M09Rik lincRNA lincRNA MGP_LPJ_T0076615.1 MGP_LPJ_G0030454.1 mouse_genomes_project 6 29630831 29681723 - MGP_LPJ_P0076615 Podxl protein_coding protein_coding MGP_LPJ_T0076616.1 MGP_LPJ_G0030454.1 mouse_genomes_project 6 29634334 29635654 - Podxl protein_coding processed_transcript MGP_LPJ_T0008672.1 MGP_LPJ_G0007010.1 mouse_genomes_project 6 87845141 87847507 - Gm44386 lincRNA lincRNA MGP_LPJ_T0102264.1 MGP_LPJ_G0040301.1 mouse_genomes_project 6 133655904 133663582 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0018259.1 MGP_LPJ_G0015565.1 mouse_genomes_project 6 128770422 128793059 + processed_transcript antisense MGP_LPJ_T0018260.1 MGP_LPJ_G0015565.1 mouse_genomes_project 6 128770471 128771475 + processed_transcript retained_intron MGP_LPJ_T0018261.1 MGP_LPJ_G0015565.1 mouse_genomes_project 6 128770491 128775433 + processed_transcript antisense MGP_LPJ_T0018262.1 MGP_LPJ_G0015565.1 mouse_genomes_project 6 128770565 128778416 + processed_transcript antisense MGP_LPJ_T0015404.1 MGP_LPJ_G0013495.1 mouse_genomes_project 6 77122424 77122899 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004942.1 MGP_LPJ_G0004242.1 mouse_genomes_project 6 27439473 27441447 + Gm26627 antisense antisense MGP_LPJ_T0102278.1 MGP_LPJ_G0040315.1 mouse_genomes_project 6 137250003 137250905 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0076744.1 MGP_LPJ_G0030476.1 mouse_genomes_project 6 33561905 33575787 - MGP_LPJ_P0076744 Fam180a protein_coding protein_coding MGP_LPJ_T0010816.1 MGP_LPJ_G0008934.1 mouse_genomes_project 6 115977900 115977990 + Gm24387 miRNA miRNA MGP_LPJ_T0077903.1 MGP_LPJ_G0030782.1 mouse_genomes_project 6 73100080 73275220 - MGP_LPJ_P0077903 Tcf7l1 protein_coding protein_coding MGP_LPJ_T0077904.1 MGP_LPJ_G0030782.1 mouse_genomes_project 6 73100961 73274918 - MGP_LPJ_P0077904 Tcf7l1 protein_coding protein_coding MGP_LPJ_T0077905.1 MGP_LPJ_G0030782.1 mouse_genomes_project 6 73101280 73103928 - Tcf7l1 protein_coding processed_transcript MGP_LPJ_T0077906.1 MGP_LPJ_G0030782.1 mouse_genomes_project 6 73108600 73274564 - MGP_LPJ_P0077906 Tcf7l1 protein_coding protein_coding MGP_LPJ_T0077907.1 MGP_LPJ_G0030782.1 mouse_genomes_project 6 73125487 73148108 - Tcf7l1 protein_coding processed_transcript MGP_LPJ_T0080417.1 MGP_LPJ_G0031327.1 mouse_genomes_project 6 141064911 141127609 + MGP_LPJ_P0080417 Atf7ip protein_coding protein_coding MGP_LPJ_T0080418.1 MGP_LPJ_G0031327.1 mouse_genomes_project 6 141079482 141171780 + MGP_LPJ_P0080418 Atf7ip protein_coding protein_coding MGP_LPJ_T0080419.1 MGP_LPJ_G0031327.1 mouse_genomes_project 6 141079486 141124622 + MGP_LPJ_P0080419 Atf7ip protein_coding protein_coding MGP_LPJ_T0080420.1 MGP_LPJ_G0031327.1 mouse_genomes_project 6 141079521 141143765 + MGP_LPJ_P0080420 Atf7ip protein_coding protein_coding MGP_LPJ_T0080421.1 MGP_LPJ_G0031327.1 mouse_genomes_project 6 141079526 141085074 + Atf7ip protein_coding retained_intron MGP_LPJ_T0080422.1 MGP_LPJ_G0031327.1 mouse_genomes_project 6 141093791 141148034 + MGP_LPJ_P0080422 Atf7ip protein_coding protein_coding MGP_LPJ_T0080423.1 MGP_LPJ_G0031327.1 mouse_genomes_project 6 141112014 141120738 + MGP_LPJ_P0080423 Atf7ip protein_coding protein_coding MGP_LPJ_T0080424.1 MGP_LPJ_G0031327.1 mouse_genomes_project 6 141114840 141120921 + MGP_LPJ_P0080424 Atf7ip protein_coding protein_coding MGP_LPJ_T0080425.1 MGP_LPJ_G0031327.1 mouse_genomes_project 6 141114858 141116054 + Atf7ip protein_coding retained_intron MGP_LPJ_T0080426.1 MGP_LPJ_G0031327.1 mouse_genomes_project 6 141121670 141133377 + MGP_LPJ_P0080426 Atf7ip protein_coding protein_coding MGP_LPJ_T0080427.1 MGP_LPJ_G0031327.1 mouse_genomes_project 6 141138241 141143712 + Atf7ip protein_coding retained_intron MGP_LPJ_T0080428.1 MGP_LPJ_G0031327.1 mouse_genomes_project 6 141156370 141169224 + Atf7ip protein_coding retained_intron MGP_LPJ_T0098657.1 MGP_LPJ_G0036927.1 mouse_genomes_project 6 116370770 116372648 - Gm44167 sense_intronic sense_intronic MGP_LPJ_T0008743.1 MGP_LPJ_G0007068.1 mouse_genomes_project 6 129886605 129893761 + lincRNA lincRNA MGP_LPJ_T0076261.1 MGP_LPJ_G0030387.1 mouse_genomes_project 6 19560301 19865763 + MGP_LPJ_P0076261 Cped1 protein_coding protein_coding MGP_LPJ_T0076262.1 MGP_LPJ_G0030387.1 mouse_genomes_project 6 19560329 19585265 + Cped1 protein_coding processed_transcript MGP_LPJ_T0076263.1 MGP_LPJ_G0030387.1 mouse_genomes_project 6 19560329 19707432 + MGP_LPJ_P0076263 Cped1 protein_coding nonsense_mediated_decay MGP_LPJ_T0076264.1 MGP_LPJ_G0030387.1 mouse_genomes_project 6 19560981 19706459 + MGP_LPJ_P0076264 Cped1 protein_coding protein_coding MGP_LPJ_T0076265.1 MGP_LPJ_G0030387.1 mouse_genomes_project 6 19561277 19654288 + Cped1 protein_coding processed_transcript MGP_LPJ_T0076266.1 MGP_LPJ_G0030387.1 mouse_genomes_project 6 19592721 19849099 + MGP_LPJ_P0076266 Cped1 protein_coding protein_coding MGP_LPJ_T0076267.1 MGP_LPJ_G0030387.1 mouse_genomes_project 6 19603644 19669813 + Cped1 protein_coding processed_transcript MGP_LPJ_T0076268.1 MGP_LPJ_G0030387.1 mouse_genomes_project 6 19712130 19735940 + Cped1 protein_coding retained_intron MGP_LPJ_T0002145.1 MGP_LPJ_G0002055.1 mouse_genomes_project 6 114792802 114795325 + TEC TEC MGP_LPJ_T0018224.1 MGP_LPJ_G0015552.1 mouse_genomes_project 6 59946304 60079666 - processed_transcript lincRNA MGP_LPJ_T0018225.1 MGP_LPJ_G0015552.1 mouse_genomes_project 6 60072167 60079657 - processed_transcript lincRNA MGP_LPJ_T0018226.1 MGP_LPJ_G0015552.1 mouse_genomes_project 6 60073172 60079630 - processed_transcript lincRNA MGP_LPJ_T0018227.1 MGP_LPJ_G0015552.1 mouse_genomes_project 6 60073188 60079639 - processed_transcript lincRNA MGP_LPJ_T0018228.1 MGP_LPJ_G0015552.1 mouse_genomes_project 6 60077033 60079666 - processed_transcript retained_intron MGP_LPJ_T0079943.1 MGP_LPJ_G0031181.1 mouse_genomes_project 6 128536884 128541362 + MGP_LPJ_P0079943 Acrbp protein_coding protein_coding MGP_LPJ_T0079944.1 MGP_LPJ_G0031181.1 mouse_genomes_project 6 128537143 128538693 + MGP_LPJ_P0079944 Acrbp protein_coding protein_coding MGP_LPJ_T0079945.1 MGP_LPJ_G0031181.1 mouse_genomes_project 6 128537155 128552202 + MGP_LPJ_P0079945 Acrbp protein_coding protein_coding MGP_LPJ_T0079946.1 MGP_LPJ_G0031181.1 mouse_genomes_project 6 128537163 128538745 + MGP_LPJ_P0079946 Acrbp protein_coding protein_coding MGP_LPJ_T0079947.1 MGP_LPJ_G0031181.1 mouse_genomes_project 6 128539051 128541361 + Acrbp protein_coding processed_transcript MGP_LPJ_T0079948.1 MGP_LPJ_G0031181.1 mouse_genomes_project 6 128540969 128542376 + Acrbp protein_coding retained_intron MGP_LPJ_T0079949.1 MGP_LPJ_G0031181.1 mouse_genomes_project 6 128551123 128552177 + Acrbp protein_coding retained_intron MGP_LPJ_T0005091.1 MGP_LPJ_G0004342.1 mouse_genomes_project 6 116515518 116517986 + Gm15082 antisense antisense MGP_LPJ_T0010772.1 MGP_LPJ_G0008890.1 mouse_genomes_project 6 27321789 27321878 + Gm26220 miRNA miRNA MGP_LPJ_T0102248.1 MGP_LPJ_G0040285.1 mouse_genomes_project 6 87667431 87668568 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0099651.1 MGP_LPJ_G0037914.1 mouse_genomes_project 6 62989679 62989785 - Gm22212 snRNA snRNA MGP_LPJ_T0002060.1 MGP_LPJ_G0001970.1 mouse_genomes_project 6 81153753 81155415 + TEC TEC MGP_LPJ_T0011681.1 MGP_LPJ_G0009799.1 mouse_genomes_project 6 118406620 118406870 - Gm27853 misc_RNA misc_RNA MGP_LPJ_T0005060.1 MGP_LPJ_G0004324.1 mouse_genomes_project 6 93597152 93600876 - 4930466I24Rik antisense antisense MGP_LPJ_T0002164.1 MGP_LPJ_G0002073.1 mouse_genomes_project 6 126121349 126123717 + TEC TEC MGP_LPJ_T0101590.1 MGP_LPJ_G0039675.1 mouse_genomes_project 6 135161040 135324895 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0076060.1 MGP_LPJ_G0030354.1 mouse_genomes_project 6 5146657 5364810 + MGP_LPJ_P0076060 Umad1 protein_coding protein_coding MGP_LPJ_T0076061.1 MGP_LPJ_G0030354.1 mouse_genomes_project 6 5146719 5328750 + MGP_LPJ_P0076061 Umad1 protein_coding protein_coding MGP_LPJ_T0076062.1 MGP_LPJ_G0030354.1 mouse_genomes_project 6 5146751 5330375 + MGP_LPJ_P0076062 Umad1 protein_coding protein_coding MGP_LPJ_T0076063.1 MGP_LPJ_G0030354.1 mouse_genomes_project 6 5146797 5328891 + MGP_LPJ_P0076063 Umad1 protein_coding protein_coding MGP_LPJ_T0076064.1 MGP_LPJ_G0030354.1 mouse_genomes_project 6 5146799 5330372 + MGP_LPJ_P0076064 Umad1 protein_coding protein_coding MGP_LPJ_T0076065.1 MGP_LPJ_G0030354.1 mouse_genomes_project 6 5146813 5167256 + Umad1 protein_coding processed_transcript MGP_LPJ_T0076067.1 MGP_LPJ_G0030354.1 mouse_genomes_project 6 5157832 5330378 + MGP_LPJ_P0076067 Umad1 protein_coding protein_coding MGP_LPJ_T0076068.1 MGP_LPJ_G0030354.1 mouse_genomes_project 6 5321279 5329849 + Umad1 protein_coding processed_transcript MGP_LPJ_T0080392.1 MGP_LPJ_G0031321.1 mouse_genomes_project 6 139619472 139661402 + MGP_LPJ_P0080392 Fam234b protein_coding protein_coding MGP_LPJ_T0080393.1 MGP_LPJ_G0031321.1 mouse_genomes_project 6 139619472 139670106 + MGP_LPJ_P0080393 Fam234b protein_coding protein_coding MGP_LPJ_T0080394.1 MGP_LPJ_G0031321.1 mouse_genomes_project 6 139619604 139631031 + MGP_LPJ_P0080394 Fam234b protein_coding protein_coding MGP_LPJ_T0080395.1 MGP_LPJ_G0031321.1 mouse_genomes_project 6 139619907 139631060 + MGP_LPJ_P0080395 Fam234b protein_coding protein_coding MGP_LPJ_T0080396.1 MGP_LPJ_G0031321.1 mouse_genomes_project 6 139656752 139661398 + Fam234b protein_coding retained_intron MGP_LPJ_T0099640.1 MGP_LPJ_G0037903.1 mouse_genomes_project 6 27941694 27941801 + Gm24536 snRNA snRNA MGP_LPJ_T0015371.1 MGP_LPJ_G0013462.1 mouse_genomes_project 6 67765930 67767009 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101373.1 MGP_LPJ_G0039569.1 mouse_genomes_project 6 9084505 9096782 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101374.1 MGP_LPJ_G0039569.1 mouse_genomes_project 6 9084697 9085257 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0011686.1 MGP_LPJ_G0009804.1 mouse_genomes_project 6 146618776 146619087 - Gm23069 misc_RNA misc_RNA MGP_LPJ_T0080322.1 MGP_LPJ_G0031306.1 mouse_genomes_project 6 138184342 138188230 - MGP_LPJ_P0080322 Kap protein_coding protein_coding MGP_LPJ_T0080323.1 MGP_LPJ_G0031306.1 mouse_genomes_project 6 138184445 138188141 - MGP_LPJ_P0080323 Kap protein_coding protein_coding MGP_LPJ_T0010791.1 MGP_LPJ_G0008909.1 mouse_genomes_project 6 54874019 54874129 + Gm44352 miRNA miRNA MGP_LPJ_T0077764.1 MGP_LPJ_G0030760.1 mouse_genomes_project 6 72001454 72050010 - MGP_LPJ_P0077764 Kdm3a protein_coding protein_coding MGP_LPJ_T0077765.1 MGP_LPJ_G0030760.1 mouse_genomes_project 6 72001456 72049791 - MGP_LPJ_P0077765 Kdm3a protein_coding protein_coding MGP_LPJ_T0077766.1 MGP_LPJ_G0030760.1 mouse_genomes_project 6 72001519 72050095 - MGP_LPJ_P0077766 Kdm3a protein_coding protein_coding MGP_LPJ_T0077767.1 MGP_LPJ_G0030760.1 mouse_genomes_project 6 72002610 72004415 - Kdm3a protein_coding retained_intron MGP_LPJ_T0077768.1 MGP_LPJ_G0030760.1 mouse_genomes_project 6 72003039 72005054 - Kdm3a protein_coding retained_intron MGP_LPJ_T0077769.1 MGP_LPJ_G0030760.1 mouse_genomes_project 6 72006446 72009645 - Kdm3a protein_coding retained_intron MGP_LPJ_T0077770.1 MGP_LPJ_G0030760.1 mouse_genomes_project 6 72007091 72021362 - Kdm3a protein_coding processed_transcript MGP_LPJ_T0077771.1 MGP_LPJ_G0030760.1 mouse_genomes_project 6 72009434 72011875 - Kdm3a protein_coding retained_intron MGP_LPJ_T0077772.1 MGP_LPJ_G0030760.1 mouse_genomes_project 6 72011781 72049791 - MGP_LPJ_P0077772 Kdm3a protein_coding protein_coding MGP_LPJ_T0077773.1 MGP_LPJ_G0030760.1 mouse_genomes_project 6 72011882 72013611 - Kdm3a protein_coding retained_intron MGP_LPJ_T0077774.1 MGP_LPJ_G0030760.1 mouse_genomes_project 6 72013178 72025636 - MGP_LPJ_P0077774 Kdm3a protein_coding nonsense_mediated_decay MGP_LPJ_T0077775.1 MGP_LPJ_G0030760.1 mouse_genomes_project 6 72015198 72035306 - Kdm3a protein_coding retained_intron MGP_LPJ_T0077776.1 MGP_LPJ_G0030760.1 mouse_genomes_project 6 72015587 72016436 - Kdm3a protein_coding processed_transcript MGP_LPJ_T0077777.1 MGP_LPJ_G0030760.1 mouse_genomes_project 6 72025377 72035029 - Kdm3a protein_coding processed_transcript MGP_LPJ_T0015359.1 MGP_LPJ_G0013450.1 mouse_genomes_project 6 66921390 66921685 + processed_pseudogene processed_pseudogene MGP_LPJ_T0080822.1 MGP_LPJ_G0031401.1 mouse_genomes_project 6 152149731 152151381 + MGP_LPJ_P0080822 Rep15 protein_coding protein_coding MGP_LPJ_T0015298.1 MGP_LPJ_G0013389.1 mouse_genomes_project 6 48739322 48739595 - processed_pseudogene processed_pseudogene MGP_LPJ_T0077196.1 MGP_LPJ_G0030609.1 mouse_genomes_project 6 47619916 47626746 + MGP_LPJ_P0077196 Gimap4 protein_coding protein_coding MGP_LPJ_T0077197.1 MGP_LPJ_G0030609.1 mouse_genomes_project 6 47619945 47627428 + MGP_LPJ_P0077197 Gimap4 protein_coding protein_coding MGP_LPJ_T0077198.1 MGP_LPJ_G0030609.1 mouse_genomes_project 6 47619945 47627428 + MGP_LPJ_P0077198 Gimap4 protein_coding protein_coding MGP_LPJ_T0077199.1 MGP_LPJ_G0030609.1 mouse_genomes_project 6 47619948 47627245 + MGP_LPJ_P0077199 Gimap4 protein_coding protein_coding MGP_LPJ_T0077200.1 MGP_LPJ_G0030609.1 mouse_genomes_project 6 47619948 47627425 + MGP_LPJ_P0077200 Gimap4 protein_coding nonsense_mediated_decay MGP_LPJ_T0077201.1 MGP_LPJ_G0030609.1 mouse_genomes_project 6 47619949 47627428 + MGP_LPJ_P0077201 Gimap4 protein_coding protein_coding MGP_LPJ_T0080653.1 MGP_LPJ_G0031376.1 mouse_genomes_project 6 147771511 147928101 - MGP_LPJ_P0080653 St8sia1 protein_coding protein_coding MGP_LPJ_T0080654.1 MGP_LPJ_G0031376.1 mouse_genomes_project 6 147778196 147927790 - MGP_LPJ_P0080654 St8sia1 protein_coding nonsense_mediated_decay MGP_LPJ_T0080655.1 MGP_LPJ_G0031376.1 mouse_genomes_project 6 147778826 147839699 - St8sia1 protein_coding processed_transcript MGP_LPJ_T0077973.1 MGP_LPJ_G0030801.1 mouse_genomes_project 6 82984444 83038865 + MGP_LPJ_P0077973 Eva1a protein_coding protein_coding MGP_LPJ_T0077974.1 MGP_LPJ_G0030801.1 mouse_genomes_project 6 82985025 83040071 + MGP_LPJ_P0077974 Eva1a protein_coding protein_coding MGP_LPJ_T0077975.1 MGP_LPJ_G0030801.1 mouse_genomes_project 6 82985090 82990555 + Eva1a protein_coding processed_transcript MGP_LPJ_T0077976.1 MGP_LPJ_G0030801.1 mouse_genomes_project 6 82995763 83039130 + MGP_LPJ_P0077976 Eva1a protein_coding protein_coding MGP_LPJ_T0078806.1 MGP_LPJ_G0030967.1 mouse_genomes_project 6 97266968 97524993 - MGP_LPJ_P0078806 Suclg2 protein_coding protein_coding MGP_LPJ_T0078807.1 MGP_LPJ_G0030967.1 mouse_genomes_project 6 97269029 97524968 - MGP_LPJ_P0078807 Suclg2 protein_coding protein_coding MGP_LPJ_T0078808.1 MGP_LPJ_G0030967.1 mouse_genomes_project 6 97367236 97446657 - Suclg2 protein_coding processed_transcript MGP_LPJ_T0078809.1 MGP_LPJ_G0030967.1 mouse_genomes_project 6 97395427 97460094 - MGP_LPJ_P0078809 Suclg2 protein_coding protein_coding MGP_LPJ_T0078810.1 MGP_LPJ_G0030967.1 mouse_genomes_project 6 97457383 97524993 - Suclg2 protein_coding retained_intron MGP_LPJ_T0000157.1 MGP_LPJ_G0000117.1 mouse_genomes_project 6 67778726 67779192 + MGP_LPJ_P0000157 Igkv14-130 IG_V_gene IG_V_gene MGP_LPJ_T0000158.1 MGP_LPJ_G0000117.1 mouse_genomes_project 6 67778726 67779192 + MGP_LPJ_P0000158 Igkv14-130 IG_V_gene IG_V_gene MGP_LPJ_T0102266.1 MGP_LPJ_G0040303.1 mouse_genomes_project 6 134421742 134431371 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0076155.1 MGP_LPJ_G0030370.1 mouse_genomes_project 6 12958518 13043989 + MGP_LPJ_P0076155 Mdfic protein_coding protein_coding MGP_LPJ_T0076156.1 MGP_LPJ_G0030370.1 mouse_genomes_project 6 12958518 13043993 + MGP_LPJ_P0076156 Mdfic protein_coding protein_coding MGP_LPJ_T0076157.1 MGP_LPJ_G0030370.1 mouse_genomes_project 6 12958560 13011912 + MGP_LPJ_P0076157 Mdfic protein_coding nonsense_mediated_decay MGP_LPJ_T0076158.1 MGP_LPJ_G0030370.1 mouse_genomes_project 6 12958578 13013978 + MGP_LPJ_P0076158 Mdfic protein_coding protein_coding MGP_LPJ_T0076159.1 MGP_LPJ_G0030370.1 mouse_genomes_project 6 12958944 13042633 + MGP_LPJ_P0076159 Mdfic protein_coding protein_coding MGP_LPJ_T0076160.1 MGP_LPJ_G0030370.1 mouse_genomes_project 6 12967593 13011026 + MGP_LPJ_P0076160 Mdfic protein_coding protein_coding MGP_LPJ_T0008525.1 MGP_LPJ_G0006904.1 mouse_genomes_project 6 10910958 11102055 + lincRNA lincRNA MGP_LPJ_T0008526.1 MGP_LPJ_G0006904.1 mouse_genomes_project 6 10911001 10946458 + lincRNA lincRNA MGP_LPJ_T0008747.1 MGP_LPJ_G0007072.1 mouse_genomes_project 6 131515030 131518664 - Gm42810 lincRNA lincRNA MGP_LPJ_T0008632.1 MGP_LPJ_G0006977.1 mouse_genomes_project 6 60765167 60769719 - Gm43893 lincRNA lincRNA MGP_LPJ_T0002585.1 MGP_LPJ_G0002484.1 mouse_genomes_project 6 40050521 40050569 + MGP_LPJ_P0002585 Trbj1-2 TR_J_gene TR_J_gene MGP_LPJ_T0080137.1 MGP_LPJ_G0031222.1 mouse_genomes_project 6 132100133 132110158 + MGP_LPJ_P0080137 4933413G19Rik protein_coding protein_coding MGP_LPJ_T0080138.1 MGP_LPJ_G0031222.1 mouse_genomes_project 6 132100133 132110821 + MGP_LPJ_P0080138 4933413G19Rik protein_coding protein_coding MGP_LPJ_T0076536.1 MGP_LPJ_G0030441.1 mouse_genomes_project 6 28419282 28476187 + MGP_LPJ_P0076536 Klhdc10 protein_coding protein_coding MGP_LPJ_T0076537.1 MGP_LPJ_G0030441.1 mouse_genomes_project 6 28419408 28478083 + MGP_LPJ_P0076537 Klhdc10 protein_coding protein_coding MGP_LPJ_T0076538.1 MGP_LPJ_G0030441.1 mouse_genomes_project 6 28419412 28473461 + MGP_LPJ_P0076538 Klhdc10 protein_coding protein_coding MGP_LPJ_T0076539.1 MGP_LPJ_G0030441.1 mouse_genomes_project 6 28436870 28470346 + MGP_LPJ_P0076539 Klhdc10 protein_coding protein_coding MGP_LPJ_T0076540.1 MGP_LPJ_G0030441.1 mouse_genomes_project 6 28466646 28473740 + Klhdc10 protein_coding retained_intron MGP_LPJ_T0098046.1 MGP_LPJ_G0036327.1 mouse_genomes_project 6 46251132 46251677 - pseudogene pseudogene MGP_LPJ_T0015605.1 MGP_LPJ_G0013696.1 mouse_genomes_project 6 141043501 141043895 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008654.1 MGP_LPJ_G0006998.1 mouse_genomes_project 6 82851990 82858552 - lincRNA lincRNA MGP_LPJ_T0102216.1 MGP_LPJ_G0040253.1 mouse_genomes_project 6 40020650 40022181 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0077952.1 MGP_LPJ_G0030796.1 mouse_genomes_project 6 79189878 79192181 - Reg3g protein_coding retained_intron MGP_LPJ_T0077953.1 MGP_LPJ_G0030796.1 mouse_genomes_project 6 79189878 79192482 - MGP_LPJ_P0077953 Reg3g protein_coding protein_coding MGP_LPJ_T0076135.1 MGP_LPJ_G0030368.1 mouse_genomes_project 6 11923130 11965871 - MGP_LPJ_P0076135 Ppp1r3a protein_coding protein_coding MGP_LPJ_T0076269.1 MGP_LPJ_G0030388.1 mouse_genomes_project 6 19901849 19907202 + MGP_LPJ_P0076269 Wnt16 protein_coding protein_coding MGP_LPJ_T0076270.1 MGP_LPJ_G0030388.1 mouse_genomes_project 6 19901852 19912191 + MGP_LPJ_P0076270 Wnt16 protein_coding protein_coding MGP_LPJ_T0076271.1 MGP_LPJ_G0030388.1 mouse_genomes_project 6 19901910 19908208 + MGP_LPJ_P0076271 Wnt16 protein_coding protein_coding MGP_LPJ_T0076272.1 MGP_LPJ_G0030388.1 mouse_genomes_project 6 19902483 19911496 + MGP_LPJ_P0076272 Wnt16 protein_coding protein_coding MGP_LPJ_T0015292.1 MGP_LPJ_G0013383.1 mouse_genomes_project 6 48037676 48037983 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002116.1 MGP_LPJ_G0002026.1 mouse_genomes_project 6 93727952 93729757 - TEC TEC MGP_LPJ_T0001976.1 MGP_LPJ_G0001886.1 mouse_genomes_project 6 31595745 31597357 + TEC TEC MGP_LPJ_T0079702.1 MGP_LPJ_G0031129.1 mouse_genomes_project 6 126005972 126015072 + MGP_LPJ_P0079702 Nanog protein_coding protein_coding MGP_LPJ_T0015430.1 MGP_LPJ_G0013521.1 mouse_genomes_project 6 86692856 86693325 + processed_pseudogene processed_pseudogene MGP_LPJ_T0078046.1 MGP_LPJ_G0030815.1 mouse_genomes_project 6 84101431 84107917 + MGP_LPJ_P0078046 protein_coding protein_coding MGP_LPJ_T0078048.1 MGP_LPJ_G0030815.1 mouse_genomes_project 6 84101488 84103685 + protein_coding retained_intron MGP_LPJ_T0078049.1 MGP_LPJ_G0030815.1 mouse_genomes_project 6 84106623 84107357 + protein_coding retained_intron MGP_LPJ_T0010823.1 MGP_LPJ_G0008941.1 mouse_genomes_project 6 120852713 120852785 + Mir7044 miRNA miRNA MGP_LPJ_T0102220.1 MGP_LPJ_G0040257.1 mouse_genomes_project 6 41452337 41452651 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0100909.1 MGP_LPJ_G0039172.1 mouse_genomes_project 6 94993006 94993137 - Gm25094 snoRNA snoRNA MGP_LPJ_T0076892.1 MGP_LPJ_G0030509.1 mouse_genomes_project 6 38321726 38709534 + MGP_LPJ_P0076892 Tmem178b protein_coding protein_coding MGP_LPJ_T0076893.1 MGP_LPJ_G0030509.1 mouse_genomes_project 6 38561324 38702897 + MGP_LPJ_P0076893 Tmem178b protein_coding protein_coding MGP_LPJ_T0076894.1 MGP_LPJ_G0030509.1 mouse_genomes_project 6 38703360 38709609 + Tmem178b protein_coding retained_intron MGP_LPJ_T0002175.1 MGP_LPJ_G0002084.1 mouse_genomes_project 6 132084205 132084675 + TEC TEC MGP_LPJ_T0077544.1 MGP_LPJ_G0030694.1 mouse_genomes_project 6 56619155 56620090 + MGP_LPJ_P0077544 Vmn1r12 protein_coding protein_coding MGP_LPJ_T0076954.1 MGP_LPJ_G0030535.1 mouse_genomes_project 6 40138345 40154905 - MGP_LPJ_P0076954 Trpv6 protein_coding protein_coding MGP_LPJ_T0076955.1 MGP_LPJ_G0030535.1 mouse_genomes_project 6 40138348 40154905 - MGP_LPJ_P0076955 Trpv6 protein_coding protein_coding MGP_LPJ_T0076956.1 MGP_LPJ_G0030535.1 mouse_genomes_project 6 40141216 40154880 - Trpv6 protein_coding retained_intron MGP_LPJ_T0078924.1 MGP_LPJ_G0030991.1 mouse_genomes_project 6 106738513 106898475 + MGP_LPJ_P0078924 Cntn6 protein_coding protein_coding MGP_LPJ_T0078925.1 MGP_LPJ_G0030991.1 mouse_genomes_project 6 106738777 106823132 + Cntn6 protein_coding retained_intron MGP_LPJ_T0078926.1 MGP_LPJ_G0030991.1 mouse_genomes_project 6 106815712 107144526 + MGP_LPJ_P0078926 Cntn6 protein_coding protein_coding MGP_LPJ_T0001941.1 MGP_LPJ_G0001851.1 mouse_genomes_project 6 1720251 1721479 + TEC TEC MGP_LPJ_T0015454.1 MGP_LPJ_G0013545.1 mouse_genomes_project 6 96579844 96580834 + processed_pseudogene processed_pseudogene MGP_LPJ_T0080745.1 MGP_LPJ_G0031388.1 mouse_genomes_project 6 150990478 150997774 - MGP_LPJ_P0080745 Bhlhe41 protein_coding protein_coding MGP_LPJ_T0080746.1 MGP_LPJ_G0031388.1 mouse_genomes_project 6 150995720 150997518 - MGP_LPJ_P0080746 Bhlhe41 protein_coding protein_coding MGP_LPJ_T0080747.1 MGP_LPJ_G0031388.1 mouse_genomes_project 6 150996878 150997568 - Bhlhe41 protein_coding retained_intron MGP_LPJ_T0015548.1 MGP_LPJ_G0013639.1 mouse_genomes_project 6 128627996 128633465 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004991.1 MGP_LPJ_G0004280.1 mouse_genomes_project 6 58525591 58532952 + Gm45060 antisense antisense MGP_LPJ_T0002034.1 MGP_LPJ_G0001944.1 mouse_genomes_project 6 72212452 72215261 + TEC TEC MGP_LPJ_T0015501.1 MGP_LPJ_G0013592.1 mouse_genomes_project 6 116127476 116127701 - processed_pseudogene processed_pseudogene MGP_LPJ_T0076324.1 MGP_LPJ_G0030404.1 mouse_genomes_project 6 22472511 22491652 + MGP_LPJ_P0076324 Hyal4 protein_coding protein_coding MGP_LPJ_T0015377.1 MGP_LPJ_G0013468.1 mouse_genomes_project 6 68425350 68426861 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000217.1 MGP_LPJ_G0000164.1 mouse_genomes_project 6 70163541 70164103 - MGP_LPJ_P0000217 Igkv5-37 IG_V_gene IG_V_gene MGP_LPJ_T0080677.1 MGP_LPJ_G0031379.1 mouse_genomes_project 6 148816696 149220811 - MGP_LPJ_P0080677 Sox5 protein_coding protein_coding MGP_LPJ_T0080678.1 MGP_LPJ_G0031379.1 mouse_genomes_project 6 148816696 149220911 - MGP_LPJ_P0080678 Sox5 protein_coding protein_coding MGP_LPJ_T0080679.1 MGP_LPJ_G0031379.1 mouse_genomes_project 6 148819846 149220883 - MGP_LPJ_P0080679 Sox5 protein_coding protein_coding MGP_LPJ_T0080680.1 MGP_LPJ_G0031379.1 mouse_genomes_project 6 148821066 148941364 - MGP_LPJ_P0080680 Sox5 protein_coding protein_coding MGP_LPJ_T0080681.1 MGP_LPJ_G0031379.1 mouse_genomes_project 6 148821202 149220783 - MGP_LPJ_P0080681 Sox5 protein_coding protein_coding MGP_LPJ_T0080682.1 MGP_LPJ_G0031379.1 mouse_genomes_project 6 148827479 148941359 - Sox5 protein_coding processed_transcript MGP_LPJ_T0080683.1 MGP_LPJ_G0031379.1 mouse_genomes_project 6 148831633 149832848 - Sox5 protein_coding retained_intron MGP_LPJ_T0080684.1 MGP_LPJ_G0031379.1 mouse_genomes_project 6 148832731 148941355 - MGP_LPJ_P0080684 Sox5 protein_coding protein_coding MGP_LPJ_T0080685.1 MGP_LPJ_G0031379.1 mouse_genomes_project 6 148848999 148941346 - MGP_LPJ_P0080685 Sox5 protein_coding protein_coding MGP_LPJ_T0080686.1 MGP_LPJ_G0031379.1 mouse_genomes_project 6 148891313 149215757 - Sox5 protein_coding retained_intron MGP_LPJ_T0080687.1 MGP_LPJ_G0031379.1 mouse_genomes_project 6 149021960 149220811 - Sox5 protein_coding retained_intron MGP_LPJ_T0080688.1 MGP_LPJ_G0031379.1 mouse_genomes_project 6 149111432 149832790 - Sox5 protein_coding processed_transcript MGP_LPJ_T0080689.1 MGP_LPJ_G0031379.1 mouse_genomes_project 6 149123473 149215387 - Sox5 protein_coding processed_transcript MGP_LPJ_T0080690.1 MGP_LPJ_G0031379.1 mouse_genomes_project 6 149161823 149220911 - Sox5 protein_coding retained_intron MGP_LPJ_T0099665.1 MGP_LPJ_G0037928.1 mouse_genomes_project 6 99453824 99453987 - Gm23510 snRNA snRNA MGP_LPJ_T0102249.1 MGP_LPJ_G0040286.1 mouse_genomes_project 6 91188823 91189622 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0077578.1 MGP_LPJ_G0030713.1 mouse_genomes_project 6 57439115 57440168 - MGP_LPJ_P0077578 Vmn1r25 protein_coding protein_coding MGP_LPJ_T0000205.1 MGP_LPJ_G0000154.1 mouse_genomes_project 6 69637203 69637666 - MGP_LPJ_P0000205 Igkv4-69 IG_V_gene IG_V_gene MGP_LPJ_T0077718.1 MGP_LPJ_G0030744.1 mouse_genomes_project 6 67243962 67296161 - MGP_LPJ_P0077718 Il12rb2 protein_coding protein_coding MGP_LPJ_T0077719.1 MGP_LPJ_G0030744.1 mouse_genomes_project 6 67246159 67332695 - MGP_LPJ_P0077719 Il12rb2 protein_coding protein_coding MGP_LPJ_T0098659.1 MGP_LPJ_G0036929.1 mouse_genomes_project 6 132073225 132074605 - Gm44190 sense_intronic sense_intronic MGP_LPJ_T0008548.1 MGP_LPJ_G0006920.1 mouse_genomes_project 6 29180982 29181286 - Gm13834 lincRNA lincRNA MGP_LPJ_T0002049.1 MGP_LPJ_G0001959.1 mouse_genomes_project 6 78122766 78126877 - TEC TEC MGP_LPJ_T0015369.1 MGP_LPJ_G0013460.1 mouse_genomes_project 6 67722391 67723446 - processed_pseudogene processed_pseudogene MGP_LPJ_T0076865.1 MGP_LPJ_G0030503.1 mouse_genomes_project 6 37877581 37979085 - MGP_LPJ_P0076865 Dennd2a protein_coding protein_coding MGP_LPJ_T0076866.1 MGP_LPJ_G0030503.1 mouse_genomes_project 6 37878456 37904123 - Dennd2a protein_coding retained_intron MGP_LPJ_T0076867.1 MGP_LPJ_G0030503.1 mouse_genomes_project 6 37883400 37885521 - Dennd2a protein_coding retained_intron MGP_LPJ_T0076868.1 MGP_LPJ_G0030503.1 mouse_genomes_project 6 37899535 37901413 - Dennd2a protein_coding retained_intron MGP_LPJ_T0076869.1 MGP_LPJ_G0030503.1 mouse_genomes_project 6 37912661 37979085 - MGP_LPJ_P0076869 Dennd2a protein_coding protein_coding MGP_LPJ_T0077261.1 MGP_LPJ_G0030625.1 mouse_genomes_project 6 48221830 48244612 - MGP_LPJ_P0077261 Tra2a protein_coding protein_coding MGP_LPJ_T0077262.1 MGP_LPJ_G0030625.1 mouse_genomes_project 6 48221830 48244613 - MGP_LPJ_P0077262 Tra2a protein_coding nonsense_mediated_decay MGP_LPJ_T0077263.1 MGP_LPJ_G0030625.1 mouse_genomes_project 6 48221834 48244635 - Tra2a protein_coding retained_intron MGP_LPJ_T0077264.1 MGP_LPJ_G0030625.1 mouse_genomes_project 6 48221834 48244632 - MGP_LPJ_P0077264 Tra2a protein_coding protein_coding MGP_LPJ_T0077265.1 MGP_LPJ_G0030625.1 mouse_genomes_project 6 48240844 48244632 - Tra2a protein_coding retained_intron MGP_LPJ_T0008540.1 MGP_LPJ_G0006915.1 mouse_genomes_project 6 27960531 27969071 + Smkr-ps lincRNA lincRNA MGP_LPJ_T0008541.1 MGP_LPJ_G0006915.1 mouse_genomes_project 6 27960533 27969324 + Smkr-ps lincRNA lincRNA MGP_LPJ_T0015602.1 MGP_LPJ_G0013693.1 mouse_genomes_project 6 139589157 139590063 - processed_pseudogene processed_pseudogene MGP_LPJ_T0077542.1 MGP_LPJ_G0030692.1 mouse_genomes_project 6 56558974 56559972 + MGP_LPJ_P0077542 Vmn1r10 protein_coding protein_coding MGP_LPJ_T0002589.1 MGP_LPJ_G0002487.1 mouse_genomes_project 6 40051604 40051654 + MGP_LPJ_P0002589 Trbj1-5 TR_J_gene TR_J_gene MGP_LPJ_T0008518.1 MGP_LPJ_G0006899.1 mouse_genomes_project 6 4640124 4650899 + Gm44217 lincRNA lincRNA MGP_LPJ_T0077623.1 MGP_LPJ_G0030726.1 mouse_genomes_project 6 60623921 60647385 + Mmrn1 protein_coding retained_intron MGP_LPJ_T0077624.1 MGP_LPJ_G0030726.1 mouse_genomes_project 6 60645742 60691294 + MGP_LPJ_P0077624 Mmrn1 protein_coding protein_coding MGP_LPJ_T0077625.1 MGP_LPJ_G0030726.1 mouse_genomes_project 6 60645744 60691294 + MGP_LPJ_P0077625 Mmrn1 protein_coding protein_coding MGP_LPJ_T0002092.1 MGP_LPJ_G0002002.1 mouse_genomes_project 6 89377822 89381361 + TEC TEC MGP_LPJ_T0000240.1 MGP_LPJ_G0000180.1 mouse_genomes_project 6 70697023 70697548 - MGP_LPJ_P0000240 Igkv6-14 IG_V_gene IG_V_gene MGP_LPJ_T0000183.1 MGP_LPJ_G0000135.1 mouse_genomes_project 6 68749467 68749937 + MGP_LPJ_P0000183 Igkv10-95 IG_V_gene IG_V_gene MGP_LPJ_T0075997.1 MGP_LPJ_G0030337.1 mouse_genomes_project 6 1953147 1978733 - MGP_LPJ_P0075997 Pon1 protein_coding protein_coding MGP_LPJ_T0075998.1 MGP_LPJ_G0030337.1 mouse_genomes_project 6 1953552 1978571 - MGP_LPJ_P0075998 Pon1 protein_coding protein_coding MGP_LPJ_T0075999.1 MGP_LPJ_G0030337.1 mouse_genomes_project 6 1956829 1978571 - MGP_LPJ_P0075999 Pon1 protein_coding protein_coding MGP_LPJ_T0076000.1 MGP_LPJ_G0030337.1 mouse_genomes_project 6 1970340 1978550 - Pon1 protein_coding retained_intron MGP_LPJ_T0001972.1 MGP_LPJ_G0001882.1 mouse_genomes_project 6 29202061 29204155 - TEC TEC MGP_LPJ_T0005142.1 MGP_LPJ_G0004387.1 mouse_genomes_project 6 149512714 149532458 + Sox5os2 antisense antisense MGP_LPJ_T0076303.1 MGP_LPJ_G0030395.1 mouse_genomes_project 6 21342491 21343730 - MGP_LPJ_P0076303 Rnf148 protein_coding protein_coding MGP_LPJ_T0079564.1 MGP_LPJ_G0031101.1 mouse_genomes_project 6 123240238 123298864 + MGP_LPJ_P0079564 Kdm5a protein_coding nonsense_mediated_decay MGP_LPJ_T0079565.1 MGP_LPJ_G0031101.1 mouse_genomes_project 6 123240238 123324139 + MGP_LPJ_P0079565 Kdm5a protein_coding protein_coding MGP_LPJ_T0079566.1 MGP_LPJ_G0031101.1 mouse_genomes_project 6 123240246 123245723 + Kdm5a protein_coding retained_intron MGP_LPJ_T0079567.1 MGP_LPJ_G0031101.1 mouse_genomes_project 6 123240572 123298837 + MGP_LPJ_P0079567 Kdm5a protein_coding nonsense_mediated_decay MGP_LPJ_T0079568.1 MGP_LPJ_G0031101.1 mouse_genomes_project 6 123250931 123265455 + MGP_LPJ_P0079568 Kdm5a protein_coding protein_coding MGP_LPJ_T0079569.1 MGP_LPJ_G0031101.1 mouse_genomes_project 6 123285071 123293061 + Kdm5a protein_coding retained_intron MGP_LPJ_T0079570.1 MGP_LPJ_G0031101.1 mouse_genomes_project 6 123305248 123308292 + Kdm5a protein_coding retained_intron MGP_LPJ_T0079571.1 MGP_LPJ_G0031101.1 mouse_genomes_project 6 123307832 123311609 + Kdm5a protein_coding retained_intron MGP_LPJ_T0079572.1 MGP_LPJ_G0031101.1 mouse_genomes_project 6 123308213 123319277 + Kdm5a protein_coding processed_transcript MGP_LPJ_T0000341.1 MGP_LPJ_G0000279.1 mouse_genomes_project 6 69062080 69062546 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0018182.1 MGP_LPJ_G0015542.1 mouse_genomes_project 6 29319315 29439238 + 2210408F21Rik processed_transcript lincRNA MGP_LPJ_T0018183.1 MGP_LPJ_G0015542.1 mouse_genomes_project 6 29319315 29439112 + 2210408F21Rik processed_transcript lincRNA MGP_LPJ_T0018184.1 MGP_LPJ_G0015542.1 mouse_genomes_project 6 29319315 29439269 + 2210408F21Rik processed_transcript lincRNA MGP_LPJ_T0018185.1 MGP_LPJ_G0015542.1 mouse_genomes_project 6 29319321 29439257 + 2210408F21Rik processed_transcript lincRNA MGP_LPJ_T0018186.1 MGP_LPJ_G0015542.1 mouse_genomes_project 6 29319369 29439242 + 2210408F21Rik processed_transcript lincRNA MGP_LPJ_T0018187.1 MGP_LPJ_G0015542.1 mouse_genomes_project 6 29319369 29439250 + 2210408F21Rik processed_transcript lincRNA MGP_LPJ_T0018188.1 MGP_LPJ_G0015542.1 mouse_genomes_project 6 29319386 29439175 + 2210408F21Rik processed_transcript lincRNA MGP_LPJ_T0018189.1 MGP_LPJ_G0015542.1 mouse_genomes_project 6 29319386 29430170 + 2210408F21Rik processed_transcript lincRNA MGP_LPJ_T0018190.1 MGP_LPJ_G0015542.1 mouse_genomes_project 6 29319399 29439262 + 2210408F21Rik processed_transcript lincRNA MGP_LPJ_T0018191.1 MGP_LPJ_G0015542.1 mouse_genomes_project 6 29319405 29439238 + 2210408F21Rik processed_transcript lincRNA MGP_LPJ_T0018192.1 MGP_LPJ_G0015542.1 mouse_genomes_project 6 29319411 29439265 + 2210408F21Rik processed_transcript lincRNA MGP_LPJ_T0018193.1 MGP_LPJ_G0015542.1 mouse_genomes_project 6 29379753 29395115 + 2210408F21Rik processed_transcript lincRNA MGP_LPJ_T0018194.1 MGP_LPJ_G0015542.1 mouse_genomes_project 6 29386907 29439268 + 2210408F21Rik processed_transcript lincRNA MGP_LPJ_T0018195.1 MGP_LPJ_G0015542.1 mouse_genomes_project 6 29394428 29395561 + 2210408F21Rik processed_transcript TEC MGP_LPJ_T0018196.1 MGP_LPJ_G0015542.1 mouse_genomes_project 6 29423818 29439250 + 2210408F21Rik processed_transcript lincRNA MGP_LPJ_T0077526.1 MGP_LPJ_G0030686.1 mouse_genomes_project 6 56272158 56313896 - MGP_LPJ_P0077526 Nt5c3 protein_coding protein_coding MGP_LPJ_T0077527.1 MGP_LPJ_G0030686.1 mouse_genomes_project 6 56272158 56292012 - MGP_LPJ_P0077527 Nt5c3 protein_coding protein_coding MGP_LPJ_T0077528.1 MGP_LPJ_G0030686.1 mouse_genomes_project 6 56272709 56313783 - MGP_LPJ_P0077528 Nt5c3 protein_coding nonsense_mediated_decay MGP_LPJ_T0077529.1 MGP_LPJ_G0030686.1 mouse_genomes_project 6 56272742 56313840 - MGP_LPJ_P0077529 Nt5c3 protein_coding nonsense_mediated_decay MGP_LPJ_T0077530.1 MGP_LPJ_G0030686.1 mouse_genomes_project 6 56274552 56313688 - MGP_LPJ_P0077530 Nt5c3 protein_coding protein_coding MGP_LPJ_T0077531.1 MGP_LPJ_G0030686.1 mouse_genomes_project 6 56276418 56279626 - Nt5c3 protein_coding retained_intron MGP_LPJ_T0077532.1 MGP_LPJ_G0030686.1 mouse_genomes_project 6 56281277 56313854 - Nt5c3 protein_coding processed_transcript MGP_LPJ_T0077533.1 MGP_LPJ_G0030686.1 mouse_genomes_project 6 56282538 56313821 - Nt5c3 protein_coding processed_transcript MGP_LPJ_T0077534.1 MGP_LPJ_G0030686.1 mouse_genomes_project 6 56285583 56292009 - Nt5c3 protein_coding retained_intron MGP_LPJ_T0000220.1 MGP_LPJ_G0000166.1 mouse_genomes_project 6 70213750 70214475 - MGP_LPJ_P0000220 Igkv1-35 IG_V_gene IG_V_gene MGP_LPJ_T0000221.1 MGP_LPJ_G0000166.1 mouse_genomes_project 6 70213750 70214475 - MGP_LPJ_P0000221 Igkv1-35 IG_V_gene IG_V_gene MGP_LPJ_T0002127.1 MGP_LPJ_G0002037.1 mouse_genomes_project 6 102324126 102325685 - TEC TEC MGP_LPJ_T0005115.1 MGP_LPJ_G0004364.1 mouse_genomes_project 6 131398727 131400085 + Gm42738 antisense antisense MGP_LPJ_T0080085.1 MGP_LPJ_G0031212.1 mouse_genomes_project 6 130721543 130747461 - MGP_LPJ_P0080085 Ccnd2 protein_coding protein_coding MGP_LPJ_T0080086.1 MGP_LPJ_G0031212.1 mouse_genomes_project 6 130726878 130735543 - Ccnd2 protein_coding processed_transcript MGP_LPJ_T0080087.1 MGP_LPJ_G0031212.1 mouse_genomes_project 6 130735483 130743083 - Ccnd2 protein_coding processed_transcript MGP_LPJ_T0080088.1 MGP_LPJ_G0031212.1 mouse_genomes_project 6 130742417 130748594 - MGP_LPJ_P0080088 Ccnd2 protein_coding protein_coding MGP_LPJ_T0080089.1 MGP_LPJ_G0031212.1 mouse_genomes_project 6 130743896 130747408 - Ccnd2 protein_coding retained_intron MGP_LPJ_T0080090.1 MGP_LPJ_G0031212.1 mouse_genomes_project 6 130744678 130747434 - MGP_LPJ_P0080090 Ccnd2 protein_coding protein_coding MGP_LPJ_T0080091.1 MGP_LPJ_G0031212.1 mouse_genomes_project 6 130744695 130747408 - MGP_LPJ_P0080091 Ccnd2 protein_coding protein_coding MGP_LPJ_T0080092.1 MGP_LPJ_G0031212.1 mouse_genomes_project 6 130747181 130747362 - Ccnd2 protein_coding processed_transcript MGP_LPJ_T0079802.1 MGP_LPJ_G0031160.1 mouse_genomes_project 6 128193682 128217341 - MGP_LPJ_P0079802 Ptpn6 protein_coding protein_coding MGP_LPJ_T0079803.1 MGP_LPJ_G0031160.1 mouse_genomes_project 6 128193682 128217252 - MGP_LPJ_P0079803 Ptpn6 protein_coding protein_coding MGP_LPJ_T0079804.1 MGP_LPJ_G0031160.1 mouse_genomes_project 6 128193682 128210096 - MGP_LPJ_P0079804 Ptpn6 protein_coding protein_coding MGP_LPJ_T0079805.1 MGP_LPJ_G0031160.1 mouse_genomes_project 6 128193695 128194818 - MGP_LPJ_P0079805 Ptpn6 protein_coding protein_coding MGP_LPJ_T0079806.1 MGP_LPJ_G0031160.1 mouse_genomes_project 6 128194083 128217211 - MGP_LPJ_P0079806 Ptpn6 protein_coding protein_coding MGP_LPJ_T0079807.1 MGP_LPJ_G0031160.1 mouse_genomes_project 6 128199732 128204403 - MGP_LPJ_P0079807 Ptpn6 protein_coding protein_coding MGP_LPJ_T0079808.1 MGP_LPJ_G0031160.1 mouse_genomes_project 6 128199780 128204353 - MGP_LPJ_P0079808 Ptpn6 protein_coding protein_coding MGP_LPJ_T0079809.1 MGP_LPJ_G0031160.1 mouse_genomes_project 6 128204688 128205650 - Ptpn6 protein_coding retained_intron MGP_LPJ_T0079810.1 MGP_LPJ_G0031160.1 mouse_genomes_project 6 128205842 128209713 - Ptpn6 protein_coding processed_transcript MGP_LPJ_T0079811.1 MGP_LPJ_G0031160.1 mouse_genomes_project 6 128209303 128210024 - MGP_LPJ_P0079811 Ptpn6 protein_coding protein_coding MGP_LPJ_T0079812.1 MGP_LPJ_G0031160.1 mouse_genomes_project 6 128209596 128210052 - Ptpn6 protein_coding retained_intron MGP_LPJ_T0077724.1 MGP_LPJ_G0030748.1 mouse_genomes_project 6 71211142 71276131 + MGP_LPJ_P0077724 Eif2ak3 protein_coding protein_coding MGP_LPJ_T0077725.1 MGP_LPJ_G0030748.1 mouse_genomes_project 6 71211180 71233918 + MGP_LPJ_P0077725 Eif2ak3 protein_coding protein_coding MGP_LPJ_T0077726.1 MGP_LPJ_G0030748.1 mouse_genomes_project 6 71211183 71212247 + Eif2ak3 protein_coding retained_intron MGP_LPJ_T0077727.1 MGP_LPJ_G0030748.1 mouse_genomes_project 6 71247668 71262491 + Eif2ak3 protein_coding retained_intron MGP_LPJ_T0077728.1 MGP_LPJ_G0030748.1 mouse_genomes_project 6 71265818 71269313 + Eif2ak3 protein_coding retained_intron MGP_LPJ_T0004965.1 MGP_LPJ_G0004262.1 mouse_genomes_project 6 39440008 39440306 + Gm29588 antisense antisense MGP_LPJ_T0079731.1 MGP_LPJ_G0031139.1 mouse_genomes_project 6 126484989 126526445 + MGP_LPJ_P0079731 Clec4b2 protein_coding protein_coding MGP_LPJ_T0077305.1 MGP_LPJ_G0030633.1 mouse_genomes_project 6 49640381 49644355 - MGP_LPJ_P0077305 protein_coding protein_coding MGP_LPJ_T0100878.1 MGP_LPJ_G0039141.1 mouse_genomes_project 6 27145463 27145594 + Gm26021 snoRNA snoRNA MGP_LPJ_T0079190.1 MGP_LPJ_G0031038.1 mouse_genomes_project 6 116710035 116829173 + MGP_LPJ_P0079190 Slc6a11 protein_coding protein_coding MGP_LPJ_T0079191.1 MGP_LPJ_G0031038.1 mouse_genomes_project 6 116710213 116711230 + Slc6a11 protein_coding retained_intron MGP_LPJ_T0015510.1 MGP_LPJ_G0013601.1 mouse_genomes_project 6 118426162 118426570 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010826.1 MGP_LPJ_G0008944.1 mouse_genomes_project 6 123705782 123705879 - Gm25193 miRNA miRNA MGP_LPJ_T0076721.1 MGP_LPJ_G0030472.1 mouse_genomes_project 6 33170241 33205077 - MGP_LPJ_P0076721 protein_coding protein_coding MGP_LPJ_T0076722.1 MGP_LPJ_G0030472.1 mouse_genomes_project 6 33170898 33215487 - MGP_LPJ_P0076722 protein_coding protein_coding MGP_LPJ_T0076723.1 MGP_LPJ_G0030472.1 mouse_genomes_project 6 33172466 33173541 - protein_coding processed_transcript MGP_LPJ_T0076724.1 MGP_LPJ_G0030472.1 mouse_genomes_project 6 33173399 33180867 - MGP_LPJ_P0076724 protein_coding protein_coding MGP_LPJ_T0076725.1 MGP_LPJ_G0030472.1 mouse_genomes_project 6 33178802 33206132 - MGP_LPJ_P0076725 protein_coding protein_coding MGP_LPJ_T0004959.1 MGP_LPJ_G0004257.1 mouse_genomes_project 6 37502916 37532650 + 4930599N23Rik antisense antisense MGP_LPJ_T0077053.1 MGP_LPJ_G0030571.1 mouse_genomes_project 6 41444628 41445621 + MGP_LPJ_P0077053 Olfr446 protein_coding protein_coding MGP_LPJ_T0011682.1 MGP_LPJ_G0009800.1 mouse_genomes_project 6 125534731 125534980 - Gm27826 misc_RNA misc_RNA MGP_LPJ_T0015256.1 MGP_LPJ_G0013347.1 mouse_genomes_project 6 38076732 38077248 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001963.1 MGP_LPJ_G0001873.1 mouse_genomes_project 6 26063724 26067522 - TEC TEC MGP_LPJ_T0015209.1 MGP_LPJ_G0013300.1 mouse_genomes_project 6 11456218 11456789 - processed_pseudogene processed_pseudogene MGP_LPJ_T0080261.1 MGP_LPJ_G0031264.1 mouse_genomes_project 6 133877398 133894714 - MGP_LPJ_P0080261 protein_coding protein_coding MGP_LPJ_T0099683.1 MGP_LPJ_G0037946.1 mouse_genomes_project 6 134224550 134224625 + Gm24676 snRNA snRNA MGP_LPJ_T0080216.1 MGP_LPJ_G0031247.1 mouse_genomes_project 6 133317646 133340498 - MGP_LPJ_P0080216 Clec1a protein_coding protein_coding MGP_LPJ_T0080217.1 MGP_LPJ_G0031247.1 mouse_genomes_project 6 133318695 133340634 - MGP_LPJ_P0080217 Clec1a protein_coding protein_coding MGP_LPJ_T0080218.1 MGP_LPJ_G0031247.1 mouse_genomes_project 6 133318766 133340618 - MGP_LPJ_P0080218 Clec1a protein_coding nonsense_mediated_decay MGP_LPJ_T0015250.1 MGP_LPJ_G0013341.1 mouse_genomes_project 6 36124712 36125117 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002206.1 MGP_LPJ_G0002115.1 mouse_genomes_project 6 151083105 151085975 + TEC TEC MGP_LPJ_T0015525.1 MGP_LPJ_G0013616.1 mouse_genomes_project 6 124037632 124039063 + processed_pseudogene processed_pseudogene MGP_LPJ_T0018223.1 MGP_LPJ_G0015551.1 mouse_genomes_project 6 56924464 57083843 + processed_transcript processed_transcript MGP_LPJ_T0005148.1 MGP_LPJ_G0004392.1 mouse_genomes_project 6 150120221 150123765 + Gm15687 antisense antisense MGP_LPJ_T0076759.1 MGP_LPJ_G0030481.1 mouse_genomes_project 6 35640277 35736564 - MGP_LPJ_P0076759 Creb3l2 protein_coding unknown_likely_coding MGP_LPJ_T0077567.1 MGP_LPJ_G0030707.1 mouse_genomes_project 6 57185042 57282040 - MGP_LPJ_P0077567 Vopp1 protein_coding protein_coding MGP_LPJ_T0077568.1 MGP_LPJ_G0030707.1 mouse_genomes_project 6 57211908 57281884 - MGP_LPJ_P0077568 Vopp1 protein_coding protein_coding MGP_LPJ_T0077569.1 MGP_LPJ_G0030707.1 mouse_genomes_project 6 57218001 57282058 - MGP_LPJ_P0077569 Vopp1 protein_coding protein_coding MGP_LPJ_T0077570.1 MGP_LPJ_G0030707.1 mouse_genomes_project 6 57222216 57281544 - Vopp1 protein_coding processed_transcript MGP_LPJ_T0080551.1 MGP_LPJ_G0031352.1 mouse_genomes_project 6 144834490 144835397 + Capza3 protein_coding processed_transcript MGP_LPJ_T0080552.1 MGP_LPJ_G0031352.1 mouse_genomes_project 6 144834795 144836017 + MGP_LPJ_P0080552 Capza3 protein_coding protein_coding MGP_LPJ_T0008679.1 MGP_LPJ_G0007017.1 mouse_genomes_project 6 90596656 90606842 + Gm1965 lincRNA lincRNA MGP_LPJ_T0008680.1 MGP_LPJ_G0007017.1 mouse_genomes_project 6 90596667 90606145 + Gm1965 lincRNA lincRNA MGP_LPJ_T0008681.1 MGP_LPJ_G0007017.1 mouse_genomes_project 6 90596667 90606825 + Gm1965 lincRNA lincRNA MGP_LPJ_T0008682.1 MGP_LPJ_G0007017.1 mouse_genomes_project 6 90596667 90606860 + Gm1965 lincRNA lincRNA MGP_LPJ_T0100871.1 MGP_LPJ_G0039134.1 mouse_genomes_project 6 10131843 10131972 + Gm24985 snoRNA snoRNA MGP_LPJ_T0101580.1 MGP_LPJ_G0039669.1 mouse_genomes_project 6 125122260 125133209 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101581.1 MGP_LPJ_G0039669.1 mouse_genomes_project 6 125122364 125136104 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0005131.1 MGP_LPJ_G0004378.1 mouse_genomes_project 6 140328191 140337755 + Gm14330 antisense antisense MGP_LPJ_T0002028.1 MGP_LPJ_G0001938.1 mouse_genomes_project 6 71252461 71254909 - TEC TEC MGP_LPJ_T0000173.1 MGP_LPJ_G0000128.1 mouse_genomes_project 6 68455477 68455975 + MGP_LPJ_P0000173 Igkv16-104 IG_V_gene IG_V_gene MGP_LPJ_T0076066.1 MGP_LPJ_G0030355.1 mouse_genomes_project 6 5146819 5508549 + MGP_LPJ_P0076066 Gm45062 protein_coding nonsense_mediated_decay MGP_LPJ_T0011652.1 MGP_LPJ_G0009770.1 mouse_genomes_project 6 46587682 46587784 + Rny3 misc_RNA misc_RNA MGP_LPJ_T0080370.1 MGP_LPJ_G0031315.1 mouse_genomes_project 6 139325985 139330983 + MGP_LPJ_P0080370 Cdkn1b protein_coding protein_coding MGP_LPJ_T0080371.1 MGP_LPJ_G0031315.1 mouse_genomes_project 6 139325985 139330983 + MGP_LPJ_P0080371 Cdkn1b protein_coding protein_coding MGP_LPJ_T0080372.1 MGP_LPJ_G0031315.1 mouse_genomes_project 6 139326098 139330928 + MGP_LPJ_P0080372 Cdkn1b protein_coding protein_coding MGP_LPJ_T0008566.1 MGP_LPJ_G0006931.1 mouse_genomes_project 6 29919698 30048334 + Gm13849 lincRNA lincRNA MGP_LPJ_T0080858.1 MGP_LPJ_G0031409.1 mouse_genomes_project 6 153412400 153645415 - MGP_LPJ_P0080858 Tmtc1 protein_coding protein_coding MGP_LPJ_T0080859.1 MGP_LPJ_G0031409.1 mouse_genomes_project 6 153412400 153645415 - MGP_LPJ_P0080859 Tmtc1 protein_coding protein_coding MGP_LPJ_T0080860.1 MGP_LPJ_G0031409.1 mouse_genomes_project 6 153429192 153642618 - MGP_LPJ_P0080860 Tmtc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0080861.1 MGP_LPJ_G0031409.1 mouse_genomes_project 6 153611293 153642618 - MGP_LPJ_P0080861 Tmtc1 protein_coding protein_coding MGP_LPJ_T0077023.1 MGP_LPJ_G0030555.1 mouse_genomes_project 6 40885469 40886562 + MGP_LPJ_P0077023 Tas2r135 protein_coding protein_coding MGP_LPJ_T0076903.1 MGP_LPJ_G0030511.1 mouse_genomes_project 6 38860315 38901554 - MGP_LPJ_P0076903 E330009J07Rik protein_coding protein_coding MGP_LPJ_T0076904.1 MGP_LPJ_G0030511.1 mouse_genomes_project 6 38866440 38901552 - MGP_LPJ_P0076904 E330009J07Rik protein_coding protein_coding MGP_LPJ_T0076905.1 MGP_LPJ_G0030511.1 mouse_genomes_project 6 38883989 38896829 - MGP_LPJ_P0076905 E330009J07Rik protein_coding protein_coding MGP_LPJ_T0076906.1 MGP_LPJ_G0030511.1 mouse_genomes_project 6 38888919 38901534 - E330009J07Rik protein_coding retained_intron MGP_LPJ_T0002154.1 MGP_LPJ_G0002064.1 mouse_genomes_project 6 118932587 118936245 - TEC TEC MGP_LPJ_T0008702.1 MGP_LPJ_G0007032.1 mouse_genomes_project 6 101949808 101973453 - Gm44442 lincRNA lincRNA MGP_LPJ_T0008703.1 MGP_LPJ_G0007032.1 mouse_genomes_project 6 101949809 101953110 - Gm44442 lincRNA lincRNA MGP_LPJ_T0015344.1 MGP_LPJ_G0013435.1 mouse_genomes_project 6 65138753 65139948 - processed_pseudogene processed_pseudogene MGP_LPJ_T0079277.1 MGP_LPJ_G0031053.1 mouse_genomes_project 6 118430474 118464628 + MGP_LPJ_P0079277 Cand2 protein_coding protein_coding MGP_LPJ_T0102263.1 MGP_LPJ_G0040300.1 mouse_genomes_project 6 132874661 132875501 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0080300.1 MGP_LPJ_G0031287.1 mouse_genomes_project 6 136969526 136970444 - MGP_LPJ_P0080300 Tas2r121 protein_coding protein_coding MGP_LPJ_T0015356.1 MGP_LPJ_G0013447.1 mouse_genomes_project 6 66436901 66437661 + processed_pseudogene processed_pseudogene MGP_LPJ_T0078788.1 MGP_LPJ_G0030963.1 mouse_genomes_project 6 96242916 96351179 + MGP_LPJ_P0078788 Slc25a26 protein_coding protein_coding MGP_LPJ_T0078789.1 MGP_LPJ_G0030963.1 mouse_genomes_project 6 96242918 96350562 + MGP_LPJ_P0078789 Slc25a26 protein_coding nonsense_mediated_decay MGP_LPJ_T0078790.1 MGP_LPJ_G0030963.1 mouse_genomes_project 6 96242954 96351179 + MGP_LPJ_P0078790 Slc25a26 protein_coding nonsense_mediated_decay MGP_LPJ_T0078791.1 MGP_LPJ_G0030963.1 mouse_genomes_project 6 96243134 96253417 + Slc25a26 protein_coding processed_transcript MGP_LPJ_T0078792.1 MGP_LPJ_G0030963.1 mouse_genomes_project 6 96250126 96341179 + MGP_LPJ_P0078792 Slc25a26 protein_coding nonsense_mediated_decay MGP_LPJ_T0078793.1 MGP_LPJ_G0030963.1 mouse_genomes_project 6 96278065 96350370 + Slc25a26 protein_coding processed_transcript MGP_LPJ_T0078794.1 MGP_LPJ_G0030963.1 mouse_genomes_project 6 96322633 96350090 + Slc25a26 protein_coding processed_transcript MGP_LPJ_T0015590.1 MGP_LPJ_G0013681.1 mouse_genomes_project 6 136662722 136663196 - processed_pseudogene processed_pseudogene MGP_LPJ_T0078124.1 MGP_LPJ_G0030830.1 mouse_genomes_project 6 84495173 84521903 - MGP_LPJ_P0078124 Dguok protein_coding protein_coding MGP_LPJ_T0078125.1 MGP_LPJ_G0030830.1 mouse_genomes_project 6 84495175 84521857 - MGP_LPJ_P0078125 Dguok protein_coding nonsense_mediated_decay MGP_LPJ_T0078126.1 MGP_LPJ_G0030830.1 mouse_genomes_project 6 84495265 84521835 - MGP_LPJ_P0078126 Dguok protein_coding nonsense_mediated_decay MGP_LPJ_T0078127.1 MGP_LPJ_G0030830.1 mouse_genomes_project 6 84495821 84508635 - Dguok protein_coding processed_transcript MGP_LPJ_T0078128.1 MGP_LPJ_G0030830.1 mouse_genomes_project 6 84496169 84501979 - Dguok protein_coding processed_transcript MGP_LPJ_T0078129.1 MGP_LPJ_G0030830.1 mouse_genomes_project 6 84502947 84505390 - Dguok protein_coding retained_intron MGP_LPJ_T0078130.1 MGP_LPJ_G0030830.1 mouse_genomes_project 6 84505177 84521921 - Dguok protein_coding retained_intron MGP_LPJ_T0080751.1 MGP_LPJ_G0031390.1 mouse_genomes_project 6 151202357 151609975 - MGP_LPJ_P0080751 Itpr2 protein_coding protein_coding MGP_LPJ_T0080752.1 MGP_LPJ_G0031390.1 mouse_genomes_project 6 151205538 151609709 - MGP_LPJ_P0080752 Itpr2 protein_coding protein_coding MGP_LPJ_T0080753.1 MGP_LPJ_G0031390.1 mouse_genomes_project 6 151214659 151241276 - Itpr2 protein_coding processed_transcript MGP_LPJ_T0080754.1 MGP_LPJ_G0031390.1 mouse_genomes_project 6 151275478 151324729 - MGP_LPJ_P0080754 Itpr2 protein_coding protein_coding MGP_LPJ_T0080755.1 MGP_LPJ_G0031390.1 mouse_genomes_project 6 151275553 151292957 - Itpr2 protein_coding processed_transcript MGP_LPJ_T0080756.1 MGP_LPJ_G0031390.1 mouse_genomes_project 6 151328147 151329649 - Itpr2 protein_coding retained_intron MGP_LPJ_T0080757.1 MGP_LPJ_G0031390.1 mouse_genomes_project 6 151387964 151391769 - Itpr2 protein_coding retained_intron MGP_LPJ_T0080758.1 MGP_LPJ_G0031390.1 mouse_genomes_project 6 151460009 151502073 - MGP_LPJ_P0080758 Itpr2 protein_coding protein_coding MGP_LPJ_T0080759.1 MGP_LPJ_G0031390.1 mouse_genomes_project 6 151475416 151610020 - MGP_LPJ_P0080759 Itpr2 protein_coding nonsense_mediated_decay MGP_LPJ_T0080760.1 MGP_LPJ_G0031390.1 mouse_genomes_project 6 151485357 151609975 - Itpr2 protein_coding retained_intron MGP_LPJ_T0080761.1 MGP_LPJ_G0031390.1 mouse_genomes_project 6 151528051 151609675 - Itpr2 protein_coding processed_transcript MGP_LPJ_T0002006.1 MGP_LPJ_G0001916.1 mouse_genomes_project 6 45139328 45141858 + TEC TEC MGP_LPJ_T0079774.1 MGP_LPJ_G0031154.1 mouse_genomes_project 6 127979472 127996420 + MGP_LPJ_P0079774 protein_coding protein_coding MGP_LPJ_T0079853.1 MGP_LPJ_G0031168.1 mouse_genomes_project 6 128292594 128307060 - MGP_LPJ_P0079853 Usp5 protein_coding protein_coding MGP_LPJ_T0079854.1 MGP_LPJ_G0031168.1 mouse_genomes_project 6 128292613 128307011 - MGP_LPJ_P0079854 Usp5 protein_coding protein_coding MGP_LPJ_T0079855.1 MGP_LPJ_G0031168.1 mouse_genomes_project 6 128292995 128296213 - Usp5 protein_coding retained_intron MGP_LPJ_T0079856.1 MGP_LPJ_G0031168.1 mouse_genomes_project 6 128294821 128295469 - Usp5 protein_coding retained_intron MGP_LPJ_T0079857.1 MGP_LPJ_G0031168.1 mouse_genomes_project 6 128299350 128301045 - Usp5 protein_coding retained_intron MGP_LPJ_T0079858.1 MGP_LPJ_G0031168.1 mouse_genomes_project 6 128300194 128306984 - MGP_LPJ_P0079858 Usp5 protein_coding protein_coding MGP_LPJ_T0079859.1 MGP_LPJ_G0031168.1 mouse_genomes_project 6 128300302 128301199 - Usp5 protein_coding retained_intron MGP_LPJ_T0079860.1 MGP_LPJ_G0031168.1 mouse_genomes_project 6 128300418 128301776 - Usp5 protein_coding retained_intron MGP_LPJ_T0079861.1 MGP_LPJ_G0031168.1 mouse_genomes_project 6 128301711 128306471 - MGP_LPJ_P0079861 Usp5 protein_coding protein_coding MGP_LPJ_T0001951.1 MGP_LPJ_G0001861.1 mouse_genomes_project 6 13053122 13054792 + TEC TEC MGP_LPJ_T0010769.1 MGP_LPJ_G0008887.1 mouse_genomes_project 6 20417676 20417773 - Gm23961 miRNA miRNA MGP_LPJ_T0076108.1 MGP_LPJ_G0030362.1 mouse_genomes_project 6 10091332 10096668 + MGP_LPJ_P0076108 Tmem106b protein_coding protein_coding MGP_LPJ_T0076109.1 MGP_LPJ_G0030362.1 mouse_genomes_project 6 10091389 10093527 + MGP_LPJ_P0076109 Tmem106b protein_coding protein_coding MGP_LPJ_T0076110.1 MGP_LPJ_G0030362.1 mouse_genomes_project 6 10091412 10110822 + MGP_LPJ_P0076110 Tmem106b protein_coding protein_coding MGP_LPJ_T0076111.1 MGP_LPJ_G0030362.1 mouse_genomes_project 6 10091424 10096959 + Tmem106b protein_coding retained_intron MGP_LPJ_T0076112.1 MGP_LPJ_G0030362.1 mouse_genomes_project 6 10091427 10097944 + Tmem106b protein_coding processed_transcript MGP_LPJ_T0076113.1 MGP_LPJ_G0030362.1 mouse_genomes_project 6 10091824 10103226 + MGP_LPJ_P0076113 Tmem106b protein_coding protein_coding MGP_LPJ_T0078771.1 MGP_LPJ_G0030960.1 mouse_genomes_project 6 94439331 94467566 + MGP_LPJ_P0078771 A730049H05Rik protein_coding protein_coding MGP_LPJ_T0078772.1 MGP_LPJ_G0030960.1 mouse_genomes_project 6 94451752 94473248 + A730049H05Rik protein_coding processed_transcript MGP_LPJ_T0080547.1 MGP_LPJ_G0031351.1 mouse_genomes_project 6 144775721 144834696 - MGP_LPJ_P0080547 Plcz1 protein_coding protein_coding MGP_LPJ_T0080548.1 MGP_LPJ_G0031351.1 mouse_genomes_project 6 144775770 144834670 - MGP_LPJ_P0080548 Plcz1 protein_coding nonsense_mediated_decay MGP_LPJ_T0080549.1 MGP_LPJ_G0031351.1 mouse_genomes_project 6 144775772 144834651 - MGP_LPJ_P0080549 Plcz1 protein_coding nonsense_mediated_decay MGP_LPJ_T0080550.1 MGP_LPJ_G0031351.1 mouse_genomes_project 6 144808851 144834651 - MGP_LPJ_P0080550 Plcz1 protein_coding nonsense_mediated_decay MGP_LPJ_T0079421.1 MGP_LPJ_G0031080.1 mouse_genomes_project 6 120770438 120859029 + MGP_LPJ_P0079421 Rasgef1a protein_coding protein_coding MGP_LPJ_T0079422.1 MGP_LPJ_G0031080.1 mouse_genomes_project 6 120832994 120857983 + MGP_LPJ_P0079422 Rasgef1a protein_coding protein_coding MGP_LPJ_T0079423.1 MGP_LPJ_G0031080.1 mouse_genomes_project 6 120832994 120858054 + MGP_LPJ_P0079423 Rasgef1a protein_coding protein_coding MGP_LPJ_T0015285.1 MGP_LPJ_G0013376.1 mouse_genomes_project 6 47773618 47774974 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005011.1 MGP_LPJ_G0004297.1 mouse_genomes_project 6 84106130 84108577 - Ccdc142os antisense antisense MGP_LPJ_T0005012.1 MGP_LPJ_G0004297.1 mouse_genomes_project 6 84106141 84108576 - Ccdc142os antisense antisense MGP_LPJ_T0005013.1 MGP_LPJ_G0004297.1 mouse_genomes_project 6 84106389 84108510 - Ccdc142os antisense antisense MGP_LPJ_T0005014.1 MGP_LPJ_G0004297.1 mouse_genomes_project 6 84107269 84108577 - Ccdc142os antisense antisense MGP_LPJ_T0000333.1 MGP_LPJ_G0000271.1 mouse_genomes_project 6 68625991 68626450 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0076333.1 MGP_LPJ_G0030408.1 mouse_genomes_project 6 23391047 23415874 - MGP_LPJ_P0076333 Gpr37 protein_coding protein_coding MGP_LPJ_T0076334.1 MGP_LPJ_G0030408.1 mouse_genomes_project 6 23393584 23416811 - MGP_LPJ_P0076334 Gpr37 protein_coding protein_coding MGP_LPJ_T0101572.1 MGP_LPJ_G0039665.1 mouse_genomes_project 6 62818015 62820993 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101573.1 MGP_LPJ_G0039665.1 mouse_genomes_project 6 62818365 62819777 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0079522.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122765818 122770667 - Wnk1 protein_coding retained_intron MGP_LPJ_T0079523.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122765818 122886385 - MGP_LPJ_P0079523 Wnk1 protein_coding protein_coding MGP_LPJ_T0079524.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122765820 122886368 - MGP_LPJ_P0079524 Wnk1 protein_coding protein_coding MGP_LPJ_T0079525.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122765820 122886368 - MGP_LPJ_P0079525 Wnk1 protein_coding protein_coding MGP_LPJ_T0079526.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122766470 122885376 - MGP_LPJ_P0079526 Wnk1 protein_coding protein_coding MGP_LPJ_T0079527.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122766470 122885376 - MGP_LPJ_P0079527 Wnk1 protein_coding protein_coding MGP_LPJ_T0079528.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122769984 122779837 - MGP_LPJ_P0079528 Wnk1 protein_coding protein_coding MGP_LPJ_T0079529.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122770530 122781037 - MGP_LPJ_P0079529 Wnk1 protein_coding protein_coding MGP_LPJ_T0079530.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122773238 122777720 - MGP_LPJ_P0079530 Wnk1 protein_coding protein_coding MGP_LPJ_T0079531.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122773238 122777721 - MGP_LPJ_P0079531 Wnk1 protein_coding protein_coding MGP_LPJ_T0079532.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122774171 122777228 - Wnk1 protein_coding retained_intron MGP_LPJ_T0079533.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122780847 122791934 - MGP_LPJ_P0079533 Wnk1 protein_coding protein_coding MGP_LPJ_T0079534.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122781002 122791613 - MGP_LPJ_P0079534 Wnk1 protein_coding nonsense_mediated_decay MGP_LPJ_T0079535.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122781122 122783489 - Wnk1 protein_coding retained_intron MGP_LPJ_T0079536.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122787836 122793656 - Wnk1 protein_coding retained_intron MGP_LPJ_T0079537.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122793814 122795490 - Wnk1 protein_coding retained_intron MGP_LPJ_T0079538.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122795142 122812126 - MGP_LPJ_P0079538 Wnk1 protein_coding protein_coding MGP_LPJ_T0079539.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122795149 122799662 - MGP_LPJ_P0079539 Wnk1 protein_coding protein_coding MGP_LPJ_T0079540.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122796360 122833640 - MGP_LPJ_P0079540 Wnk1 protein_coding protein_coding MGP_LPJ_T0079541.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122797141 122886320 - Wnk1 protein_coding retained_intron MGP_LPJ_T0079542.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122797141 122833599 - Wnk1 protein_coding retained_intron MGP_LPJ_T0079543.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122799587 122806403 - MGP_LPJ_P0079543 Wnk1 protein_coding protein_coding MGP_LPJ_T0079544.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122805780 122807206 - MGP_LPJ_P0079544 Wnk1 protein_coding protein_coding MGP_LPJ_T0079545.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122813016 122836002 - Wnk1 protein_coding processed_transcript MGP_LPJ_T0079546.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122813027 122824907 - Wnk1 protein_coding processed_transcript MGP_LPJ_T0079547.1 MGP_LPJ_G0031096.1 mouse_genomes_project 6 122814209 122816527 - Wnk1 protein_coding retained_intron MGP_LPJ_T0076664.1 MGP_LPJ_G0030465.1 mouse_genomes_project 6 32682654 32712907 + MGP_LPJ_P0076664 Bpgm protein_coding protein_coding MGP_LPJ_T0076665.1 MGP_LPJ_G0030465.1 mouse_genomes_project 6 32682803 32695540 + Bpgm protein_coding retained_intron MGP_LPJ_T0076666.1 MGP_LPJ_G0030465.1 mouse_genomes_project 6 32682899 32694144 + MGP_LPJ_P0076666 Bpgm protein_coding protein_coding MGP_LPJ_T0076667.1 MGP_LPJ_G0030465.1 mouse_genomes_project 6 32682926 32694204 + MGP_LPJ_P0076667 Bpgm protein_coding protein_coding MGP_LPJ_T0076668.1 MGP_LPJ_G0030465.1 mouse_genomes_project 6 32683589 32694305 + MGP_LPJ_P0076668 Bpgm protein_coding protein_coding MGP_LPJ_T0018197.1 MGP_LPJ_G0015543.1 mouse_genomes_project 6 37945770 37959446 + 8030453O22Rik processed_transcript antisense MGP_LPJ_T0018198.1 MGP_LPJ_G0015543.1 mouse_genomes_project 6 37945779 37964795 + 8030453O22Rik processed_transcript antisense MGP_LPJ_T0018199.1 MGP_LPJ_G0015543.1 mouse_genomes_project 6 37945783 37946532 + 8030453O22Rik processed_transcript retained_intron MGP_LPJ_T0078755.1 MGP_LPJ_G0030955.1 mouse_genomes_project 6 93754924 93767872 - MGP_LPJ_P0078755 Mrps25 protein_coding protein_coding MGP_LPJ_T0078756.1 MGP_LPJ_G0030955.1 mouse_genomes_project 6 93758684 93759749 - Mrps25 protein_coding retained_intron MGP_LPJ_T0078757.1 MGP_LPJ_G0030955.1 mouse_genomes_project 6 93762152 93767810 - Mrps25 protein_coding retained_intron MGP_LPJ_T0078326.1 MGP_LPJ_G0030869.1 mouse_genomes_project 6 87686749 87695643 + MGP_LPJ_P0078326 Snrpg protein_coding protein_coding MGP_LPJ_T0078327.1 MGP_LPJ_G0030869.1 mouse_genomes_project 6 87686987 87692199 + Snrpg protein_coding retained_intron MGP_LPJ_T0078328.1 MGP_LPJ_G0030869.1 mouse_genomes_project 6 87687016 87695222 + Snrpg protein_coding processed_transcript MGP_LPJ_T0078329.1 MGP_LPJ_G0030869.1 mouse_genomes_project 6 87687049 87695173 + Snrpg protein_coding processed_transcript MGP_LPJ_T0102238.1 MGP_LPJ_G0040275.1 mouse_genomes_project 6 58034235 58034530 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0099671.1 MGP_LPJ_G0037934.1 mouse_genomes_project 6 115100279 115100386 - Gm23002 snRNA snRNA MGP_LPJ_T0078373.1 MGP_LPJ_G0030874.1 mouse_genomes_project 6 87855418 87857250 - MGP_LPJ_P0078373 Pcbp1 protein_coding protein_coding MGP_LPJ_T0015188.1 MGP_LPJ_G0013279.1 mouse_genomes_project 6 4071795 4075320 - processed_pseudogene processed_pseudogene MGP_LPJ_T0079012.1 MGP_LPJ_G0031010.1 mouse_genomes_project 6 115582130 115606742 + MGP_LPJ_P0079012 Thumpd3 protein_coding protein_coding MGP_LPJ_T0079013.1 MGP_LPJ_G0031010.1 mouse_genomes_project 6 115582207 115593363 + MGP_LPJ_P0079013 Thumpd3 protein_coding protein_coding MGP_LPJ_T0079014.1 MGP_LPJ_G0031010.1 mouse_genomes_project 6 115582220 115599266 + Thumpd3 protein_coding retained_intron MGP_LPJ_T0079015.1 MGP_LPJ_G0031010.1 mouse_genomes_project 6 115582232 115585448 + Thumpd3 protein_coding retained_intron MGP_LPJ_T0079016.1 MGP_LPJ_G0031010.1 mouse_genomes_project 6 115582262 115583924 + Thumpd3 protein_coding retained_intron MGP_LPJ_T0079017.1 MGP_LPJ_G0031010.1 mouse_genomes_project 6 115582363 115583584 + MGP_LPJ_P0079017 Thumpd3 protein_coding protein_coding MGP_LPJ_T0079018.1 MGP_LPJ_G0031010.1 mouse_genomes_project 6 115582660 115583610 + MGP_LPJ_P0079018 Thumpd3 protein_coding protein_coding MGP_LPJ_T0079019.1 MGP_LPJ_G0031010.1 mouse_genomes_project 6 115583320 115586958 + Thumpd3 protein_coding processed_transcript MGP_LPJ_T0079020.1 MGP_LPJ_G0031010.1 mouse_genomes_project 6 115596410 115599490 + Thumpd3 protein_coding retained_intron MGP_LPJ_T0079021.1 MGP_LPJ_G0031010.1 mouse_genomes_project 6 115603894 115606365 + Thumpd3 protein_coding retained_intron MGP_LPJ_T0015480.1 MGP_LPJ_G0013571.1 mouse_genomes_project 6 109440274 109440729 - processed_pseudogene processed_pseudogene MGP_LPJ_T0078996.1 MGP_LPJ_G0031006.1 mouse_genomes_project 6 114962446 114975779 + MGP_LPJ_P0078996 Cav3 protein_coding protein_coding MGP_LPJ_T0077194.1 MGP_LPJ_G0030608.1 mouse_genomes_project 6 47609622 47612193 + MGP_LPJ_P0077194 Gimap9 protein_coding protein_coding MGP_LPJ_T0077195.1 MGP_LPJ_G0030608.1 mouse_genomes_project 6 47611004 47612605 + MGP_LPJ_P0077195 Gimap9 protein_coding protein_coding MGP_LPJ_T0002035.1 MGP_LPJ_G0001945.1 mouse_genomes_project 6 72226046 72227310 + TEC TEC MGP_LPJ_T0011644.1 MGP_LPJ_G0009762.1 mouse_genomes_project 6 15279687 15279807 + Gm27402 misc_RNA misc_RNA MGP_LPJ_T0000021.1 MGP_LPJ_G0000015.1 mouse_genomes_project 6 71080241 71080773 + MGP_LPJ_P0000021 Igkc IG_C_gene IG_C_gene MGP_LPJ_T0077308.1 MGP_LPJ_G0030636.1 mouse_genomes_project 6 50587282 50616117 + MGP_LPJ_P0077308 Nfe2l3 protein_coding protein_coding MGP_LPJ_T0077309.1 MGP_LPJ_G0030636.1 mouse_genomes_project 6 50587361 50591542 + Nfe2l3 protein_coding processed_transcript MGP_LPJ_T0077310.1 MGP_LPJ_G0030636.1 mouse_genomes_project 6 50587361 50614225 + MGP_LPJ_P0077310 Nfe2l3 protein_coding protein_coding MGP_LPJ_T0080437.1 MGP_LPJ_G0031331.1 mouse_genomes_project 6 141391973 141412174 - MGP_LPJ_P0080437 Wbp11 protein_coding protein_coding MGP_LPJ_T0080438.1 MGP_LPJ_G0031331.1 mouse_genomes_project 6 141395288 141399671 - MGP_LPJ_P0080438 Wbp11 protein_coding protein_coding MGP_LPJ_T0080439.1 MGP_LPJ_G0031331.1 mouse_genomes_project 6 141395513 141412077 - MGP_LPJ_P0080439 Wbp11 protein_coding nonsense_mediated_decay MGP_LPJ_T0080440.1 MGP_LPJ_G0031331.1 mouse_genomes_project 6 141398193 141412084 - Wbp11 protein_coding retained_intron MGP_LPJ_T0080441.1 MGP_LPJ_G0031331.1 mouse_genomes_project 6 141403738 141412076 - Wbp11 protein_coding retained_intron MGP_LPJ_T0080442.1 MGP_LPJ_G0031331.1 mouse_genomes_project 6 141404488 141405476 - Wbp11 protein_coding retained_intron MGP_LPJ_T0080443.1 MGP_LPJ_G0031331.1 mouse_genomes_project 6 141404896 141411677 - MGP_LPJ_P0080443 Wbp11 protein_coding protein_coding MGP_LPJ_T0100925.1 MGP_LPJ_G0039188.1 mouse_genomes_project 6 127164076 127164203 - Gm22724 snoRNA snoRNA MGP_LPJ_T0008807.1 MGP_LPJ_G0007113.1 mouse_genomes_project 6 154839330 154840203 + lincRNA lincRNA MGP_LPJ_T0000164.1 MGP_LPJ_G0000121.1 mouse_genomes_project 6 67956552 67957039 - MGP_LPJ_P0000164 Igkv9-123 IG_V_gene IG_V_gene MGP_LPJ_T0080254.1 MGP_LPJ_G0031259.1 mouse_genomes_project 6 133654324 133672657 - MGP_LPJ_P0080254 Gm156 protein_coding protein_coding MGP_LPJ_T0080255.1 MGP_LPJ_G0031259.1 mouse_genomes_project 6 133654405 133663591 - MGP_LPJ_P0080255 Gm156 protein_coding protein_coding MGP_LPJ_T0076240.1 MGP_LPJ_G0030382.1 mouse_genomes_project 6 16235208 16240707 + MGP_LPJ_P0076240 Lsm8 protein_coding protein_coding MGP_LPJ_T0076241.1 MGP_LPJ_G0030382.1 mouse_genomes_project 6 16235270 16242406 + Lsm8 protein_coding retained_intron MGP_LPJ_T0076242.1 MGP_LPJ_G0030382.1 mouse_genomes_project 6 16235285 16237052 + Lsm8 protein_coding retained_intron MGP_LPJ_T0076243.1 MGP_LPJ_G0030382.1 mouse_genomes_project 6 16235297 16240402 + MGP_LPJ_P0076243 Lsm8 protein_coding protein_coding MGP_LPJ_T0011651.1 MGP_LPJ_G0009769.1 mouse_genomes_project 6 46442409 46442486 + Gm25283 misc_RNA misc_RNA MGP_LPJ_T0015274.1 MGP_LPJ_G0013365.1 mouse_genomes_project 6 43656907 43657610 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000215.1 MGP_LPJ_G0000163.1 mouse_genomes_project 6 70146197 70146660 - MGP_LPJ_P0000215 Igkv12-38 IG_V_gene IG_V_gene MGP_LPJ_T0000216.1 MGP_LPJ_G0000163.1 mouse_genomes_project 6 70146197 70146660 - MGP_LPJ_P0000216 Igkv12-38 IG_V_gene IG_V_gene MGP_LPJ_T0078625.1 MGP_LPJ_G0030928.1 mouse_genomes_project 6 91552934 91559587 + MGP_LPJ_P0078625 Vmn1r50 protein_coding protein_coding MGP_LPJ_T0078626.1 MGP_LPJ_G0030928.1 mouse_genomes_project 6 91558654 91559587 + MGP_LPJ_P0078626 Vmn1r50 protein_coding protein_coding MGP_LPJ_T0080104.1 MGP_LPJ_G0031215.1 mouse_genomes_project 6 131319425 131400652 - MGP_LPJ_P0080104 Prmt8 protein_coding protein_coding MGP_LPJ_T0098292.1 MGP_LPJ_G0036573.1 mouse_genomes_project 6 114718932 114719032 - n-R5s165 rRNA rRNA MGP_LPJ_T0015438.1 MGP_LPJ_G0013529.1 mouse_genomes_project 6 90330756 90331279 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098429.1 MGP_LPJ_G0036710.1 mouse_genomes_project 6 128616209 128616345 + Gm23751 scaRNA scaRNA MGP_LPJ_T0002124.1 MGP_LPJ_G0002034.1 mouse_genomes_project 6 101665537 101669312 - TEC TEC MGP_LPJ_T0002174.1 MGP_LPJ_G0002083.1 mouse_genomes_project 6 131828074 131829492 - TEC TEC MGP_LPJ_T0015360.1 MGP_LPJ_G0013451.1 mouse_genomes_project 6 67136592 67139649 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100932.1 MGP_LPJ_G0039195.1 mouse_genomes_project 6 128185956 128186227 + Gm23547 snoRNA snoRNA MGP_LPJ_T0078421.1 MGP_LPJ_G0030883.1 mouse_genomes_project 6 88464057 88471997 + MGP_LPJ_P0078421 D6Ertd527e protein_coding protein_coding MGP_LPJ_T0078422.1 MGP_LPJ_G0030883.1 mouse_genomes_project 6 88464059 88472053 + MGP_LPJ_P0078422 D6Ertd527e protein_coding protein_coding MGP_LPJ_T0078423.1 MGP_LPJ_G0030883.1 mouse_genomes_project 6 88464059 88472054 + MGP_LPJ_P0078423 D6Ertd527e protein_coding protein_coding MGP_LPJ_T0078424.1 MGP_LPJ_G0030883.1 mouse_genomes_project 6 88464093 88470464 + D6Ertd527e protein_coding processed_transcript MGP_LPJ_T0078425.1 MGP_LPJ_G0030883.1 mouse_genomes_project 6 88464124 88470456 + D6Ertd527e protein_coding processed_transcript MGP_LPJ_T0078383.1 MGP_LPJ_G0030878.1 mouse_genomes_project 6 88032093 88074856 - MGP_LPJ_P0078383 Gmcl1 protein_coding protein_coding MGP_LPJ_T0078384.1 MGP_LPJ_G0030878.1 mouse_genomes_project 6 88054543 88057193 - Gmcl1 protein_coding retained_intron MGP_LPJ_T0078385.1 MGP_LPJ_G0030878.1 mouse_genomes_project 6 88054627 88058640 - Gmcl1 protein_coding retained_intron MGP_LPJ_T0078386.1 MGP_LPJ_G0030878.1 mouse_genomes_project 6 88060244 88074713 - MGP_LPJ_P0078386 Gmcl1 protein_coding protein_coding MGP_LPJ_T0015247.1 MGP_LPJ_G0013338.1 mouse_genomes_project 6 34913918 34914346 - processed_pseudogene processed_pseudogene MGP_LPJ_T0076407.1 MGP_LPJ_G0030423.1 mouse_genomes_project 6 27194785 27203830 + MGP_LPJ_P0076407 Fam71f2 protein_coding protein_coding MGP_LPJ_T0076408.1 MGP_LPJ_G0030423.1 mouse_genomes_project 6 27196333 27207237 + MGP_LPJ_P0076408 Fam71f2 protein_coding protein_coding MGP_LPJ_T0076409.1 MGP_LPJ_G0030423.1 mouse_genomes_project 6 27196335 27207232 + MGP_LPJ_P0076409 Fam71f2 protein_coding nonsense_mediated_decay MGP_LPJ_T0004960.1 MGP_LPJ_G0004258.1 mouse_genomes_project 6 37831738 37832754 + Gm10244 antisense antisense MGP_LPJ_T0004961.1 MGP_LPJ_G0004258.1 mouse_genomes_project 6 37832229 37833146 + Gm10244 antisense antisense MGP_LPJ_T0001959.1 MGP_LPJ_G0001869.1 mouse_genomes_project 6 19241381 19245460 + TEC TEC MGP_LPJ_T0001977.1 MGP_LPJ_G0001887.1 mouse_genomes_project 6 31854059 31856178 - TEC TEC MGP_LPJ_T0102242.1 MGP_LPJ_G0040279.1 mouse_genomes_project 6 70757593 70757741 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008570.1 MGP_LPJ_G0006935.1 mouse_genomes_project 6 32369854 32376981 + Gm13855 lincRNA lincRNA MGP_LPJ_T0079371.1 MGP_LPJ_G0031071.1 mouse_genomes_project 6 119337320 119345689 - MGP_LPJ_P0079371 Zfp422 protein_coding protein_coding MGP_LPJ_T0079372.1 MGP_LPJ_G0031071.1 mouse_genomes_project 6 119338208 119345391 - MGP_LPJ_P0079372 Zfp422 protein_coding protein_coding MGP_LPJ_T0079373.1 MGP_LPJ_G0031071.1 mouse_genomes_project 6 119338208 119345612 - MGP_LPJ_P0079373 Zfp422 protein_coding protein_coding MGP_LPJ_T0079374.1 MGP_LPJ_G0031071.1 mouse_genomes_project 6 119338226 119342269 - Zfp422 protein_coding processed_transcript MGP_LPJ_T0015533.1 MGP_LPJ_G0013624.1 mouse_genomes_project 6 125523772 125524155 + processed_pseudogene processed_pseudogene MGP_LPJ_T0077637.1 MGP_LPJ_G0030728.1 mouse_genomes_project 6 63035262 63106958 + Grid2 protein_coding processed_transcript MGP_LPJ_T0077638.1 MGP_LPJ_G0030728.1 mouse_genomes_project 6 63035392 64013117 + Grid2 protein_coding processed_transcript MGP_LPJ_T0077639.1 MGP_LPJ_G0030728.1 mouse_genomes_project 6 63035413 64527451 + MGP_LPJ_P0077639 Grid2 protein_coding protein_coding MGP_LPJ_T0077640.1 MGP_LPJ_G0030728.1 mouse_genomes_project 6 63035581 63315921 + Grid2 protein_coding retained_intron MGP_LPJ_T0077641.1 MGP_LPJ_G0030728.1 mouse_genomes_project 6 63036212 64119355 + Grid2 protein_coding retained_intron MGP_LPJ_T0077642.1 MGP_LPJ_G0030728.1 mouse_genomes_project 6 63902662 63920936 + Grid2 protein_coding retained_intron MGP_LPJ_T0005015.1 MGP_LPJ_G0004298.1 mouse_genomes_project 6 84122030 84123901 + Gm44287 antisense antisense MGP_LPJ_T0100937.1 MGP_LPJ_G0039200.1 mouse_genomes_project 6 140028878 140028993 + Gm25136 snoRNA snoRNA MGP_LPJ_T0101387.1 MGP_LPJ_G0039575.1 mouse_genomes_project 6 91588246 91724682 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0080728.1 MGP_LPJ_G0031384.1 mouse_genomes_project 6 150302728 150339974 - MGP_LPJ_P0080728 Kras protein_coding protein_coding MGP_LPJ_T0080729.1 MGP_LPJ_G0031384.1 mouse_genomes_project 6 150306027 150318951 - Kras protein_coding processed_transcript MGP_LPJ_T0080730.1 MGP_LPJ_G0031384.1 mouse_genomes_project 6 150306271 150339974 - MGP_LPJ_P0080730 Kras protein_coding protein_coding MGP_LPJ_T0080731.1 MGP_LPJ_G0031384.1 mouse_genomes_project 6 150306295 150339912 - MGP_LPJ_P0080731 Kras protein_coding protein_coding MGP_LPJ_T0080732.1 MGP_LPJ_G0031384.1 mouse_genomes_project 6 150306347 150339905 - MGP_LPJ_P0080732 Kras protein_coding nonsense_mediated_decay MGP_LPJ_T0080733.1 MGP_LPJ_G0031384.1 mouse_genomes_project 6 150306661 150311608 - Kras protein_coding retained_intron MGP_LPJ_T0080734.1 MGP_LPJ_G0031384.1 mouse_genomes_project 6 150336436 150339937 - MGP_LPJ_P0080734 Kras protein_coding protein_coding MGP_LPJ_T0076745.1 MGP_LPJ_G0030477.1 mouse_genomes_project 6 33734884 33767821 - MGP_LPJ_P0076745 Mtpn protein_coding protein_coding MGP_LPJ_T0076746.1 MGP_LPJ_G0030477.1 mouse_genomes_project 6 33748618 33767732 - MGP_LPJ_P0076746 Mtpn protein_coding protein_coding MGP_LPJ_T0099684.1 MGP_LPJ_G0037947.1 mouse_genomes_project 6 134224551 134224625 + Gm22621 snRNA snRNA MGP_LPJ_T0004944.1 MGP_LPJ_G0004244.1 mouse_genomes_project 6 28706525 28714848 + Gm13782 antisense antisense MGP_LPJ_T0078217.1 MGP_LPJ_G0030844.1 mouse_genomes_project 6 85720758 86174600 - MGP_LPJ_P0078217 Exoc6b protein_coding protein_coding MGP_LPJ_T0078218.1 MGP_LPJ_G0030844.1 mouse_genomes_project 6 85925155 86174600 - Exoc6b protein_coding retained_intron MGP_LPJ_T0078219.1 MGP_LPJ_G0030844.1 mouse_genomes_project 6 85926039 86174544 - Exoc6b protein_coding retained_intron MGP_LPJ_T0078220.1 MGP_LPJ_G0030844.1 mouse_genomes_project 6 85943768 86174589 - MGP_LPJ_P0078220 Exoc6b protein_coding nonsense_mediated_decay MGP_LPJ_T0078221.1 MGP_LPJ_G0030844.1 mouse_genomes_project 6 85982540 85986549 - Exoc6b protein_coding retained_intron MGP_LPJ_T0078222.1 MGP_LPJ_G0030844.1 mouse_genomes_project 6 86038753 86174589 - Exoc6b protein_coding processed_transcript MGP_LPJ_T0078223.1 MGP_LPJ_G0030844.1 mouse_genomes_project 6 86086128 86174555 - Exoc6b protein_coding retained_intron MGP_LPJ_T0078224.1 MGP_LPJ_G0030844.1 mouse_genomes_project 6 86106150 86174562 - Exoc6b protein_coding retained_intron MGP_LPJ_T0002759.1 MGP_LPJ_G0002631.1 mouse_genomes_project 6 39619090 39619575 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0080288.1 MGP_LPJ_G0031276.1 mouse_genomes_project 6 135957555 135958587 - MGP_LPJ_P0080288 Tas2r107 protein_coding protein_coding MGP_LPJ_T0018171.1 MGP_LPJ_G0015539.1 mouse_genomes_project 6 32897 119982 - processed_transcript lincRNA MGP_LPJ_T0018172.1 MGP_LPJ_G0015539.1 mouse_genomes_project 6 35273 120021 - processed_transcript lincRNA MGP_LPJ_T0018173.1 MGP_LPJ_G0015539.1 mouse_genomes_project 6 39033 120022 - processed_transcript retained_intron MGP_LPJ_T0018174.1 MGP_LPJ_G0015539.1 mouse_genomes_project 6 43189 120053 - processed_transcript retained_intron MGP_LPJ_T0102246.1 MGP_LPJ_G0040283.1 mouse_genomes_project 6 86890588 86992845 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0079589.1 MGP_LPJ_G0031106.1 mouse_genomes_project 6 123681463 123702553 + MGP_LPJ_P0079589 Slc25a18 protein_coding protein_coding MGP_LPJ_T0015213.1 MGP_LPJ_G0013304.1 mouse_genomes_project 6 14231503 14233199 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000211.1 MGP_LPJ_G0000160.1 mouse_genomes_project 6 69993119 69993643 - MGP_LPJ_P0000211 Igkv12-44 IG_V_gene IG_V_gene MGP_LPJ_T0077908.1 MGP_LPJ_G0030783.1 mouse_genomes_project 6 73340376 73406150 - MGP_LPJ_P0077908 Kcmf1 protein_coding protein_coding MGP_LPJ_T0077909.1 MGP_LPJ_G0030783.1 mouse_genomes_project 6 73342252 73406224 - MGP_LPJ_P0077909 Kcmf1 protein_coding protein_coding MGP_LPJ_T0077910.1 MGP_LPJ_G0030783.1 mouse_genomes_project 6 73345648 73348692 - Kcmf1 protein_coding retained_intron MGP_LPJ_T0077911.1 MGP_LPJ_G0030783.1 mouse_genomes_project 6 73347514 73359412 - Kcmf1 protein_coding processed_transcript MGP_LPJ_T0076332.1 MGP_LPJ_G0030407.1 mouse_genomes_project 6 22671197 22676354 - MGP_LPJ_P0076332 Tmem229a protein_coding protein_coding MGP_LPJ_T0008524.1 MGP_LPJ_G0006903.1 mouse_genomes_project 6 10451439 10454099 + 1700016P04Rik lincRNA lincRNA MGP_LPJ_T0079148.1 MGP_LPJ_G0031030.1 mouse_genomes_project 6 116160700 116164655 - MGP_LPJ_P0079148 Fancd2os protein_coding nonsense_mediated_decay MGP_LPJ_T0079149.1 MGP_LPJ_G0031030.1 mouse_genomes_project 6 116160701 116164655 - MGP_LPJ_P0079149 Fancd2os protein_coding protein_coding MGP_LPJ_T0008529.1 MGP_LPJ_G0006907.1 mouse_genomes_project 6 14360269 14366460 - Gm15473 lincRNA lincRNA MGP_LPJ_T0077095.1 MGP_LPJ_G0030585.1 mouse_genomes_project 6 46329759 46339473 - MGP_LPJ_P0077095 Ezh2 protein_coding protein_coding MGP_LPJ_T0077096.1 MGP_LPJ_G0030585.1 mouse_genomes_project 6 46329759 46395012 - MGP_LPJ_P0077096 Ezh2 protein_coding protein_coding MGP_LPJ_T0077097.1 MGP_LPJ_G0030585.1 mouse_genomes_project 6 46329759 46395012 - MGP_LPJ_P0077097 Ezh2 protein_coding protein_coding MGP_LPJ_T0077098.1 MGP_LPJ_G0030585.1 mouse_genomes_project 6 46329759 46395012 - MGP_LPJ_P0077098 Ezh2 protein_coding protein_coding MGP_LPJ_T0077099.1 MGP_LPJ_G0030585.1 mouse_genomes_project 6 46329939 46331737 - Ezh2 protein_coding retained_intron MGP_LPJ_T0077100.1 MGP_LPJ_G0030585.1 mouse_genomes_project 6 46330161 46377742 - MGP_LPJ_P0077100 Ezh2 protein_coding protein_coding MGP_LPJ_T0077101.1 MGP_LPJ_G0030585.1 mouse_genomes_project 6 46331630 46334746 - Ezh2 protein_coding retained_intron MGP_LPJ_T0077102.1 MGP_LPJ_G0030585.1 mouse_genomes_project 6 46332250 46339447 - Ezh2 protein_coding retained_intron MGP_LPJ_T0077103.1 MGP_LPJ_G0030585.1 mouse_genomes_project 6 46333362 46344621 - Ezh2 protein_coding retained_intron MGP_LPJ_T0077104.1 MGP_LPJ_G0030585.1 mouse_genomes_project 6 46339580 46350499 - MGP_LPJ_P0077104 Ezh2 protein_coding nonsense_mediated_decay MGP_LPJ_T0077105.1 MGP_LPJ_G0030585.1 mouse_genomes_project 6 46342743 46350499 - MGP_LPJ_P0077105 Ezh2 protein_coding nonsense_mediated_decay MGP_LPJ_T0077106.1 MGP_LPJ_G0030585.1 mouse_genomes_project 6 46344520 46352959 - MGP_LPJ_P0077106 Ezh2 protein_coding nonsense_mediated_decay MGP_LPJ_T0077107.1 MGP_LPJ_G0030585.1 mouse_genomes_project 6 46344573 46395040 - MGP_LPJ_P0077107 Ezh2 protein_coding nonsense_mediated_decay MGP_LPJ_T0077108.1 MGP_LPJ_G0030585.1 mouse_genomes_project 6 46351123 46395323 - MGP_LPJ_P0077108 Ezh2 protein_coding protein_coding MGP_LPJ_T0077109.1 MGP_LPJ_G0030585.1 mouse_genomes_project 6 46354774 46378092 - Ezh2 protein_coding processed_transcript MGP_LPJ_T0080898.1 MGP_LPJ_G0031414.1 mouse_genomes_project 6 154398814 154403262 + MGP_LPJ_P0080898 Mettl20 protein_coding protein_coding MGP_LPJ_T0080899.1 MGP_LPJ_G0031414.1 mouse_genomes_project 6 154400478 154410109 + MGP_LPJ_P0080899 Mettl20 protein_coding protein_coding MGP_LPJ_T0080900.1 MGP_LPJ_G0031414.1 mouse_genomes_project 6 154400478 154410104 + MGP_LPJ_P0080900 Mettl20 protein_coding protein_coding MGP_LPJ_T0080901.1 MGP_LPJ_G0031414.1 mouse_genomes_project 6 154400481 154404108 + MGP_LPJ_P0080901 Mettl20 protein_coding protein_coding MGP_LPJ_T0080902.1 MGP_LPJ_G0031414.1 mouse_genomes_project 6 154400519 154404108 + MGP_LPJ_P0080902 Mettl20 protein_coding protein_coding MGP_LPJ_T0080903.1 MGP_LPJ_G0031414.1 mouse_genomes_project 6 154400529 154409336 + MGP_LPJ_P0080903 Mettl20 protein_coding protein_coding MGP_LPJ_T0080904.1 MGP_LPJ_G0031414.1 mouse_genomes_project 6 154400539 154410109 + MGP_LPJ_P0080904 Mettl20 protein_coding protein_coding MGP_LPJ_T0080905.1 MGP_LPJ_G0031414.1 mouse_genomes_project 6 154400603 154409351 + MGP_LPJ_P0080905 Mettl20 protein_coding protein_coding MGP_LPJ_T0080906.1 MGP_LPJ_G0031414.1 mouse_genomes_project 6 154400611 154410109 + MGP_LPJ_P0080906 Mettl20 protein_coding protein_coding MGP_LPJ_T0080291.1 MGP_LPJ_G0031279.1 mouse_genomes_project 6 135981703 135982667 - MGP_LPJ_P0080291 Tas2r105 protein_coding protein_coding MGP_LPJ_T0008625.1 MGP_LPJ_G0006971.1 mouse_genomes_project 6 55028289 55038386 + Gm3279 lincRNA lincRNA MGP_LPJ_T0000345.1 MGP_LPJ_G0000283.1 mouse_genomes_project 6 69433335 69433868 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0008736.1 MGP_LPJ_G0007061.1 mouse_genomes_project 6 123444123 123452112 + 1700072O05Rik lincRNA lincRNA MGP_LPJ_T0001973.1 MGP_LPJ_G0001883.1 mouse_genomes_project 6 29238849 29241141 - TEC TEC MGP_LPJ_T0076377.1 MGP_LPJ_G0030417.1 mouse_genomes_project 6 26536095 26714197 - MGP_LPJ_P0076377 Lrrc4 protein_coding protein_coding MGP_LPJ_T0076382.1 MGP_LPJ_G0030417.1 mouse_genomes_project 6 26711984 26715599 - MGP_LPJ_P0076382 Lrrc4 protein_coding protein_coding MGP_LPJ_T0010763.1 MGP_LPJ_G0008881.1 mouse_genomes_project 6 442753 442838 - Mir653 miRNA miRNA MGP_LPJ_T0077411.1 MGP_LPJ_G0030661.1 mouse_genomes_project 6 53324753 53353283 + Chn2 protein_coding processed_transcript MGP_LPJ_T0077412.1 MGP_LPJ_G0030661.1 mouse_genomes_project 6 53324772 53592768 + MGP_LPJ_P0077412 Chn2 protein_coding protein_coding MGP_LPJ_T0077413.1 MGP_LPJ_G0030661.1 mouse_genomes_project 6 53324812 53510917 + MGP_LPJ_P0077413 Chn2 protein_coding nonsense_mediated_decay MGP_LPJ_T0077414.1 MGP_LPJ_G0030661.1 mouse_genomes_project 6 53325238 53512881 + Chn2 protein_coding processed_transcript MGP_LPJ_T0077415.1 MGP_LPJ_G0030661.1 mouse_genomes_project 6 53325285 53484241 + MGP_LPJ_P0077415 Chn2 protein_coding protein_coding MGP_LPJ_T0077416.1 MGP_LPJ_G0030661.1 mouse_genomes_project 6 53383174 53510884 + Chn2 protein_coding processed_transcript MGP_LPJ_T0077417.1 MGP_LPJ_G0030661.1 mouse_genomes_project 6 53555110 53592340 + MGP_LPJ_P0077417 Chn2 protein_coding protein_coding MGP_LPJ_T0077418.1 MGP_LPJ_G0030661.1 mouse_genomes_project 6 53557367 53592132 + MGP_LPJ_P0077418 Chn2 protein_coding protein_coding MGP_LPJ_T0077419.1 MGP_LPJ_G0030661.1 mouse_genomes_project 6 53559376 53592438 + MGP_LPJ_P0077419 Chn2 protein_coding protein_coding MGP_LPJ_T0077420.1 MGP_LPJ_G0030661.1 mouse_genomes_project 6 53562701 53593857 + MGP_LPJ_P0077420 Chn2 protein_coding protein_coding MGP_LPJ_T0077421.1 MGP_LPJ_G0030661.1 mouse_genomes_project 6 53563119 53592291 + MGP_LPJ_P0077421 Chn2 protein_coding protein_coding MGP_LPJ_T0077422.1 MGP_LPJ_G0030661.1 mouse_genomes_project 6 53563119 53592291 + MGP_LPJ_P0077422 Chn2 protein_coding protein_coding MGP_LPJ_T0077423.1 MGP_LPJ_G0030661.1 mouse_genomes_project 6 53563119 53592291 + MGP_LPJ_P0077423 Chn2 protein_coding protein_coding MGP_LPJ_T0077424.1 MGP_LPJ_G0030661.1 mouse_genomes_project 6 53563119 53592291 + MGP_LPJ_P0077424 Chn2 protein_coding protein_coding MGP_LPJ_T0077425.1 MGP_LPJ_G0030661.1 mouse_genomes_project 6 53563119 53592291 + MGP_LPJ_P0077425 Chn2 protein_coding protein_coding MGP_LPJ_T0002004.1 MGP_LPJ_G0001914.1 mouse_genomes_project 6 44823732 44826907 + TEC TEC MGP_LPJ_T0005101.1 MGP_LPJ_G0004352.1 mouse_genomes_project 6 126123798 126130785 - Gm26826 antisense antisense MGP_LPJ_T0000194.1 MGP_LPJ_G0000144.1 mouse_genomes_project 6 69077491 69077957 - MGP_LPJ_P0000194 Igkv4-81 IG_V_gene IG_V_gene MGP_LPJ_T0008536.1 MGP_LPJ_G0006912.1 mouse_genomes_project 6 19560293 19652901 - Gm26719 lincRNA lincRNA MGP_LPJ_T0076657.1 MGP_LPJ_G0030463.1 mouse_genomes_project 6 32596098 32609597 + MGP_LPJ_P0076657 Akr1b10 protein_coding protein_coding MGP_LPJ_T0076658.1 MGP_LPJ_G0030463.1 mouse_genomes_project 6 32596129 32602251 + Akr1b10 protein_coding retained_intron MGP_LPJ_T0076659.1 MGP_LPJ_G0030463.1 mouse_genomes_project 6 32596161 32609395 + MGP_LPJ_P0076659 Akr1b10 protein_coding protein_coding MGP_LPJ_T0076660.1 MGP_LPJ_G0030463.1 mouse_genomes_project 6 32596161 32609594 + MGP_LPJ_P0076660 Akr1b10 protein_coding nonsense_mediated_decay MGP_LPJ_T0076661.1 MGP_LPJ_G0030463.1 mouse_genomes_project 6 32602270 32603239 + Akr1b10 protein_coding retained_intron MGP_LPJ_T0076662.1 MGP_LPJ_G0030463.1 mouse_genomes_project 6 32604102 32605627 + Akr1b10 protein_coding retained_intron MGP_LPJ_T0102240.1 MGP_LPJ_G0040277.1 mouse_genomes_project 6 62700380 62700711 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0102276.1 MGP_LPJ_G0040313.1 mouse_genomes_project 6 137173343 137174272 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0076975.1 MGP_LPJ_G0030543.1 mouse_genomes_project 6 40459737 40464688 + MGP_LPJ_P0076975 Sval3 protein_coding protein_coding MGP_LPJ_T0015383.1 MGP_LPJ_G0013474.1 mouse_genomes_project 6 70493910 70495255 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015597.1 MGP_LPJ_G0013688.1 mouse_genomes_project 6 137358037 137358686 + processed_pseudogene processed_pseudogene MGP_LPJ_T0076709.1 MGP_LPJ_G0030470.1 mouse_genomes_project 6 33101650 33134639 - MGP_LPJ_P0076709 Wdr91 protein_coding protein_coding MGP_LPJ_T0076710.1 MGP_LPJ_G0030470.1 mouse_genomes_project 6 33101650 33134639 - MGP_LPJ_P0076710 Wdr91 protein_coding nonsense_mediated_decay MGP_LPJ_T0076711.1 MGP_LPJ_G0030470.1 mouse_genomes_project 6 33128429 33134358 - MGP_LPJ_P0076711 Wdr91 protein_coding protein_coding MGP_LPJ_T0076712.1 MGP_LPJ_G0030470.1 mouse_genomes_project 6 33130425 33134425 - MGP_LPJ_P0076712 Wdr91 protein_coding protein_coding MGP_LPJ_T0076713.1 MGP_LPJ_G0030470.1 mouse_genomes_project 6 33132057 33134326 - MGP_LPJ_P0076713 Wdr91 protein_coding protein_coding MGP_LPJ_T0076714.1 MGP_LPJ_G0030470.1 mouse_genomes_project 6 33132309 33134596 - Wdr91 protein_coding retained_intron MGP_LPJ_T0076715.1 MGP_LPJ_G0030470.1 mouse_genomes_project 6 33133209 33134599 - Wdr91 protein_coding processed_transcript MGP_LPJ_T0076716.1 MGP_LPJ_G0030470.1 mouse_genomes_project 6 33133223 33134605 - Wdr91 protein_coding processed_transcript MGP_LPJ_T0008774.1 MGP_LPJ_G0007089.1 mouse_genomes_project 6 145834793 145920381 + Gm30524 lincRNA lincRNA MGP_LPJ_T0008775.1 MGP_LPJ_G0007089.1 mouse_genomes_project 6 145834819 145918685 + Gm30524 lincRNA lincRNA MGP_LPJ_T0015474.1 MGP_LPJ_G0013565.1 mouse_genomes_project 6 105355935 105356088 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015389.1 MGP_LPJ_G0013480.1 mouse_genomes_project 6 72088824 72089408 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002199.1 MGP_LPJ_G0002108.1 mouse_genomes_project 6 146234108 146237921 + TEC TEC MGP_LPJ_T0004935.1 MGP_LPJ_G0004236.1 mouse_genomes_project 6 15198248 15198842 - Gm26738 antisense antisense MGP_LPJ_T0000167.1 MGP_LPJ_G0000124.1 mouse_genomes_project 6 68019209 68020641 + MGP_LPJ_P0000167 Igkv1-122 IG_V_gene IG_V_gene MGP_LPJ_T0002598.1 MGP_LPJ_G0002495.1 mouse_genomes_project 6 40060891 40060938 + MGP_LPJ_P0002598 Trbj2-7 TR_J_gene TR_J_gene MGP_LPJ_T0078982.1 MGP_LPJ_G0031002.1 mouse_genomes_project 6 111174632 111210028 + MGP_LPJ_P0078982 Edem1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078983.1 MGP_LPJ_G0031002.1 mouse_genomes_project 6 111174665 111210020 + MGP_LPJ_P0078983 Edem1 protein_coding protein_coding MGP_LPJ_T0078984.1 MGP_LPJ_G0031002.1 mouse_genomes_project 6 111182397 111189129 + Edem1 protein_coding processed_transcript MGP_LPJ_T0078985.1 MGP_LPJ_G0031002.1 mouse_genomes_project 6 111195740 111200339 + Edem1 protein_coding retained_intron MGP_LPJ_T0078986.1 MGP_LPJ_G0031002.1 mouse_genomes_project 6 111201087 111206197 + Edem1 protein_coding retained_intron MGP_LPJ_T0002144.1 MGP_LPJ_G0002054.1 mouse_genomes_project 6 114575949 114576505 - TEC TEC MGP_LPJ_T0000204.1 MGP_LPJ_G0000153.1 mouse_genomes_project 6 69637203 69637702 - MGP_LPJ_P0000204 Igkv4-74 IG_V_gene IG_V_gene MGP_LPJ_T0008572.1 MGP_LPJ_G0006937.1 mouse_genomes_project 6 32865037 32867556 - Gm13861 lincRNA lincRNA MGP_LPJ_T0015504.1 MGP_LPJ_G0013595.1 mouse_genomes_project 6 116747568 116748208 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010773.1 MGP_LPJ_G0008891.1 mouse_genomes_project 6 27322606 27322749 - Gm44354 miRNA miRNA MGP_LPJ_T0005061.1 MGP_LPJ_G0004325.1 mouse_genomes_project 6 94569077 94931662 + antisense antisense MGP_LPJ_T0005062.1 MGP_LPJ_G0004325.1 mouse_genomes_project 6 94569117 94931572 + antisense antisense MGP_LPJ_T0005063.1 MGP_LPJ_G0004325.1 mouse_genomes_project 6 94569327 94748767 + antisense antisense MGP_LPJ_T0005064.1 MGP_LPJ_G0004325.1 mouse_genomes_project 6 94569331 94749050 + antisense antisense MGP_LPJ_T0005065.1 MGP_LPJ_G0004325.1 mouse_genomes_project 6 94569331 94931660 + antisense antisense MGP_LPJ_T0005066.1 MGP_LPJ_G0004325.1 mouse_genomes_project 6 94569331 94783770 + antisense antisense MGP_LPJ_T0076960.1 MGP_LPJ_G0030538.1 mouse_genomes_project 6 40205761 40226144 - MGP_LPJ_P0076960 Kel protein_coding protein_coding MGP_LPJ_T0076961.1 MGP_LPJ_G0030538.1 mouse_genomes_project 6 40205766 40207420 - MGP_LPJ_P0076961 Kel protein_coding protein_coding MGP_LPJ_T0076962.1 MGP_LPJ_G0030538.1 mouse_genomes_project 6 40205785 40207279 - Kel protein_coding processed_transcript MGP_LPJ_T0076963.1 MGP_LPJ_G0030538.1 mouse_genomes_project 6 40207446 40220973 - MGP_LPJ_P0076963 Kel protein_coding protein_coding MGP_LPJ_T0076964.1 MGP_LPJ_G0030538.1 mouse_genomes_project 6 40207861 40208387 - Kel protein_coding retained_intron MGP_LPJ_T0008533.1 MGP_LPJ_G0006909.1 mouse_genomes_project 6 14676795 14677404 + Gm29591 lincRNA lincRNA MGP_LPJ_T0078887.1 MGP_LPJ_G0030980.1 mouse_genomes_project 6 101234428 101675262 - MGP_LPJ_P0078887 Gm20696 protein_coding nonsense_mediated_decay MGP_LPJ_T0078890.1 MGP_LPJ_G0030980.1 mouse_genomes_project 6 101422159 101434641 - Gm20696 protein_coding retained_intron MGP_LPJ_T0078891.1 MGP_LPJ_G0030980.1 mouse_genomes_project 6 101422190 101639464 - Gm20696 protein_coding retained_intron MGP_LPJ_T0078271.1 MGP_LPJ_G0030855.1 mouse_genomes_project 6 86673429 86675898 - MGP_LPJ_P0078271 Egr4 protein_coding protein_coding MGP_LPJ_T0002152.1 MGP_LPJ_G0002062.1 mouse_genomes_project 6 118254348 118254758 + TEC TEC MGP_LPJ_T0079817.1 MGP_LPJ_G0031162.1 mouse_genomes_project 6 128217815 128234647 - MGP_LPJ_P0079817 protein_coding nonsense_mediated_decay MGP_LPJ_T0102279.1 MGP_LPJ_G0040316.1 mouse_genomes_project 6 137265890 137266883 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008669.1 MGP_LPJ_G0007008.1 mouse_genomes_project 6 87814787 87820331 - 2310040G24Rik lincRNA lincRNA MGP_LPJ_T0008670.1 MGP_LPJ_G0007008.1 mouse_genomes_project 6 87814787 87820354 - 2310040G24Rik lincRNA lincRNA MGP_LPJ_T0005089.1 MGP_LPJ_G0004340.1 mouse_genomes_project 6 116204755 116205723 - Gm43964 antisense antisense MGP_LPJ_T0018236.1 MGP_LPJ_G0015556.1 mouse_genomes_project 6 67031340 67084004 + A430010J10Rik processed_transcript lincRNA MGP_LPJ_T0018237.1 MGP_LPJ_G0015556.1 mouse_genomes_project 6 67031344 67032702 + A430010J10Rik processed_transcript retained_intron MGP_LPJ_T0018238.1 MGP_LPJ_G0015556.1 mouse_genomes_project 6 67080500 67083688 + A430010J10Rik processed_transcript retained_intron MGP_LPJ_T0018239.1 MGP_LPJ_G0015556.1 mouse_genomes_project 6 67080779 67081194 + A430010J10Rik processed_transcript pseudogene MGP_LPJ_T0002207.1 MGP_LPJ_G0002116.1 mouse_genomes_project 6 151364907 151367256 - TEC TEC MGP_LPJ_T0076474.1 MGP_LPJ_G0030434.1 mouse_genomes_project 6 27642375 27668149 + MGP_LPJ_P0076474 Tspan33 protein_coding protein_coding MGP_LPJ_T0076475.1 MGP_LPJ_G0030434.1 mouse_genomes_project 6 27642387 27668147 + MGP_LPJ_P0076475 Tspan33 protein_coding protein_coding MGP_LPJ_T0076476.1 MGP_LPJ_G0030434.1 mouse_genomes_project 6 27657642 27664442 + Tspan33 protein_coding retained_intron MGP_LPJ_T0079252.1 MGP_LPJ_G0031048.1 mouse_genomes_project 6 118189913 118199596 + MGP_LPJ_P0079252 Tsen2 protein_coding protein_coding MGP_LPJ_T0079253.1 MGP_LPJ_G0031048.1 mouse_genomes_project 6 118189913 118224905 + MGP_LPJ_P0079253 Tsen2 protein_coding protein_coding MGP_LPJ_T0079254.1 MGP_LPJ_G0031048.1 mouse_genomes_project 6 118189951 118205125 + Tsen2 protein_coding processed_transcript MGP_LPJ_T0079255.1 MGP_LPJ_G0031048.1 mouse_genomes_project 6 118189955 118197685 + Tsen2 protein_coding retained_intron MGP_LPJ_T0079256.1 MGP_LPJ_G0031048.1 mouse_genomes_project 6 118220724 118224268 + Tsen2 protein_coding retained_intron MGP_LPJ_T0010825.1 MGP_LPJ_G0008943.1 mouse_genomes_project 6 122882168 122882253 - Mir706 miRNA miRNA MGP_LPJ_T0079748.1 MGP_LPJ_G0031143.1 mouse_genomes_project 6 126636506 126667241 + MGP_LPJ_P0079748 Vmn2r19 protein_coding protein_coding MGP_LPJ_T0100887.1 MGP_LPJ_G0039150.1 mouse_genomes_project 6 51875955 51876077 - Gm24355 snoRNA snoRNA MGP_LPJ_T0000346.1 MGP_LPJ_G0000284.1 mouse_genomes_project 6 69452841 69453304 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0010785.1 MGP_LPJ_G0008903.1 mouse_genomes_project 6 46859800 46859893 + Gm24563 miRNA miRNA MGP_LPJ_T0076424.1 MGP_LPJ_G0030426.1 mouse_genomes_project 6 27300354 27304198 - MGP_LPJ_P0076424 Opn1sw protein_coding protein_coding MGP_LPJ_T0076425.1 MGP_LPJ_G0030426.1 mouse_genomes_project 6 27301067 27304116 - MGP_LPJ_P0076425 Opn1sw protein_coding protein_coding MGP_LPJ_T0076426.1 MGP_LPJ_G0030426.1 mouse_genomes_project 6 27302615 27304098 - Opn1sw protein_coding processed_transcript MGP_LPJ_T0076427.1 MGP_LPJ_G0030426.1 mouse_genomes_project 6 27303057 27312761 - MGP_LPJ_P0076427 Opn1sw protein_coding protein_coding MGP_LPJ_T0000162.1 MGP_LPJ_G0000120.1 mouse_genomes_project 6 67921831 67922311 + MGP_LPJ_P0000162 Igkv11-125 IG_V_gene IG_V_gene MGP_LPJ_T0000163.1 MGP_LPJ_G0000120.1 mouse_genomes_project 6 67921831 67922311 + MGP_LPJ_P0000163 Igkv11-125 IG_V_gene IG_V_gene MGP_LPJ_T0004957.1 MGP_LPJ_G0004255.1 mouse_genomes_project 6 37294355 37362890 - Gm42962 antisense antisense MGP_LPJ_T0011641.1 MGP_LPJ_G0009759.1 mouse_genomes_project 6 15042145 15042401 + Gm27542 misc_RNA misc_RNA MGP_LPJ_T0078198.1 MGP_LPJ_G0030842.1 mouse_genomes_project 6 85055462 85278022 + MGP_LPJ_P0078198 Dysf protein_coding protein_coding MGP_LPJ_T0078199.1 MGP_LPJ_G0030842.1 mouse_genomes_project 6 85055574 85277858 + MGP_LPJ_P0078199 Dysf protein_coding protein_coding MGP_LPJ_T0078200.1 MGP_LPJ_G0030842.1 mouse_genomes_project 6 85055574 85277858 + MGP_LPJ_P0078200 Dysf protein_coding protein_coding MGP_LPJ_T0078201.1 MGP_LPJ_G0030842.1 mouse_genomes_project 6 85055574 85277858 + MGP_LPJ_P0078201 Dysf protein_coding protein_coding MGP_LPJ_T0078202.1 MGP_LPJ_G0030842.1 mouse_genomes_project 6 85055639 85277858 + MGP_LPJ_P0078202 Dysf protein_coding protein_coding MGP_LPJ_T0078203.1 MGP_LPJ_G0030842.1 mouse_genomes_project 6 85055787 85278021 + MGP_LPJ_P0078203 Dysf protein_coding protein_coding MGP_LPJ_T0078204.1 MGP_LPJ_G0030842.1 mouse_genomes_project 6 85055787 85277793 + MGP_LPJ_P0078204 Dysf protein_coding unknown_likely_coding MGP_LPJ_T0078205.1 MGP_LPJ_G0030842.1 mouse_genomes_project 6 85068255 85277819 + MGP_LPJ_P0078205 Dysf protein_coding protein_coding MGP_LPJ_T0078206.1 MGP_LPJ_G0030842.1 mouse_genomes_project 6 85068255 85277819 + MGP_LPJ_P0078206 Dysf protein_coding protein_coding MGP_LPJ_T0078207.1 MGP_LPJ_G0030842.1 mouse_genomes_project 6 85068255 85277819 + MGP_LPJ_P0078207 Dysf protein_coding protein_coding MGP_LPJ_T0078208.1 MGP_LPJ_G0030842.1 mouse_genomes_project 6 85068255 85278021 + MGP_LPJ_P0078208 Dysf protein_coding protein_coding MGP_LPJ_T0078209.1 MGP_LPJ_G0030842.1 mouse_genomes_project 6 85068256 85278022 + MGP_LPJ_P0078209 Dysf protein_coding protein_coding MGP_LPJ_T0078210.1 MGP_LPJ_G0030842.1 mouse_genomes_project 6 85068259 85278021 + MGP_LPJ_P0078210 Dysf protein_coding protein_coding MGP_LPJ_T0078211.1 MGP_LPJ_G0030842.1 mouse_genomes_project 6 85162205 85169421 + Dysf protein_coding processed_transcript MGP_LPJ_T0078212.1 MGP_LPJ_G0030842.1 mouse_genomes_project 6 85163383 85174101 + Dysf protein_coding retained_intron MGP_LPJ_T0078213.1 MGP_LPJ_G0030842.1 mouse_genomes_project 6 85207566 85213228 + Dysf protein_coding processed_transcript MGP_LPJ_T0078214.1 MGP_LPJ_G0030842.1 mouse_genomes_project 6 85277445 85278003 + Dysf protein_coding processed_transcript MGP_LPJ_T0010841.1 MGP_LPJ_G0008959.1 mouse_genomes_project 6 142620858 142620972 - Gm24308 miRNA miRNA MGP_LPJ_T0076938.1 MGP_LPJ_G0030524.1 mouse_genomes_project 6 39410896 39432810 - MGP_LPJ_P0076938 1700074P13Rik protein_coding protein_coding MGP_LPJ_T0076939.1 MGP_LPJ_G0030524.1 mouse_genomes_project 6 39410919 39432870 - MGP_LPJ_P0076939 1700074P13Rik protein_coding protein_coding MGP_LPJ_T0076940.1 MGP_LPJ_G0030524.1 mouse_genomes_project 6 39413079 39420960 - MGP_LPJ_P0076940 1700074P13Rik protein_coding protein_coding MGP_LPJ_T0015612.1 MGP_LPJ_G0013703.1 mouse_genomes_project 6 144934383 144934825 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002201.1 MGP_LPJ_G0002110.1 mouse_genomes_project 6 148986559 148988703 - TEC TEC MGP_LPJ_T0099639.1 MGP_LPJ_G0037902.1 mouse_genomes_project 6 27418217 27418323 - Gm26484 snRNA snRNA MGP_LPJ_T0015331.1 MGP_LPJ_G0013422.1 mouse_genomes_project 6 62590192 62590718 + processed_pseudogene processed_pseudogene MGP_LPJ_T0077879.1 MGP_LPJ_G0030778.1 mouse_genomes_project 6 73015925 73035637 + MGP_LPJ_P0077879 Capg protein_coding protein_coding MGP_LPJ_T0077880.1 MGP_LPJ_G0030778.1 mouse_genomes_project 6 73016071 73035635 + MGP_LPJ_P0077880 Capg protein_coding protein_coding MGP_LPJ_T0077881.1 MGP_LPJ_G0030778.1 mouse_genomes_project 6 73017327 73029075 + MGP_LPJ_P0077881 Capg protein_coding protein_coding MGP_LPJ_T0077882.1 MGP_LPJ_G0030778.1 mouse_genomes_project 6 73020764 73030593 + MGP_LPJ_P0077882 Capg protein_coding protein_coding MGP_LPJ_T0077883.1 MGP_LPJ_G0030778.1 mouse_genomes_project 6 73022097 73035637 + MGP_LPJ_P0077883 Capg protein_coding protein_coding MGP_LPJ_T0077884.1 MGP_LPJ_G0030778.1 mouse_genomes_project 6 73022256 73030564 + Capg protein_coding retained_intron MGP_LPJ_T0077885.1 MGP_LPJ_G0030778.1 mouse_genomes_project 6 73022275 73028689 + MGP_LPJ_P0077885 Capg protein_coding protein_coding MGP_LPJ_T0077886.1 MGP_LPJ_G0030778.1 mouse_genomes_project 6 73022282 73028458 + Capg protein_coding retained_intron MGP_LPJ_T0077887.1 MGP_LPJ_G0030778.1 mouse_genomes_project 6 73022476 73028647 + MGP_LPJ_P0077887 Capg protein_coding protein_coding MGP_LPJ_T0077888.1 MGP_LPJ_G0030778.1 mouse_genomes_project 6 73025760 73031080 + MGP_LPJ_P0077888 Capg protein_coding protein_coding MGP_LPJ_T0077889.1 MGP_LPJ_G0030778.1 mouse_genomes_project 6 73028801 73030670 + Capg protein_coding retained_intron MGP_LPJ_T0098652.1 MGP_LPJ_G0036922.1 mouse_genomes_project 6 88331363 88332011 + Gm44091 sense_intronic sense_intronic MGP_LPJ_T0079121.1 MGP_LPJ_G0031025.1 mouse_genomes_project 6 116028055 116039908 + MGP_LPJ_P0079121 Il17rc protein_coding protein_coding MGP_LPJ_T0079122.1 MGP_LPJ_G0031025.1 mouse_genomes_project 6 116028911 116033195 + MGP_LPJ_P0079122 Il17rc protein_coding protein_coding MGP_LPJ_T0079123.1 MGP_LPJ_G0031025.1 mouse_genomes_project 6 116029422 116039908 + MGP_LPJ_P0079123 Il17rc protein_coding protein_coding MGP_LPJ_T0079124.1 MGP_LPJ_G0031025.1 mouse_genomes_project 6 116031011 116033501 + MGP_LPJ_P0079124 Il17rc protein_coding protein_coding MGP_LPJ_T0079125.1 MGP_LPJ_G0031025.1 mouse_genomes_project 6 116033344 116036058 + Il17rc protein_coding retained_intron MGP_LPJ_T0080164.1 MGP_LPJ_G0031228.1 mouse_genomes_project 6 132278034 132282997 - BC048546 protein_coding retained_intron MGP_LPJ_T0080165.1 MGP_LPJ_G0031228.1 mouse_genomes_project 6 132278040 132322090 - MGP_LPJ_P0080165 BC048546 protein_coding protein_coding MGP_LPJ_T0080166.1 MGP_LPJ_G0031228.1 mouse_genomes_project 6 132287997 132292813 - BC048546 protein_coding retained_intron MGP_LPJ_T0080167.1 MGP_LPJ_G0031228.1 mouse_genomes_project 6 132297722 132298955 - BC048546 protein_coding retained_intron MGP_LPJ_T0080168.1 MGP_LPJ_G0031228.1 mouse_genomes_project 6 132314658 132317227 - BC048546 protein_coding retained_intron MGP_LPJ_T0015532.1 MGP_LPJ_G0013623.1 mouse_genomes_project 6 125035830 125035962 - processed_pseudogene processed_pseudogene MGP_LPJ_T0080304.1 MGP_LPJ_G0031291.1 mouse_genomes_project 6 137033048 137034092 + MGP_LPJ_P0080304 Tas2r102 protein_coding protein_coding MGP_LPJ_T0100869.1 MGP_LPJ_G0039132.1 mouse_genomes_project 6 4755563 4755692 + Gm22276 snoRNA snoRNA MGP_LPJ_T0100891.1 MGP_LPJ_G0039154.1 mouse_genomes_project 6 55979510 55979642 - Gm22493 snoRNA snoRNA MGP_LPJ_T0002196.1 MGP_LPJ_G0002105.1 mouse_genomes_project 6 145122523 145123517 - TEC TEC MGP_LPJ_T0078479.1 MGP_LPJ_G0030898.1 mouse_genomes_project 6 89277574 89303293 + MGP_LPJ_P0078479 Copg1 protein_coding protein_coding MGP_LPJ_T0078480.1 MGP_LPJ_G0030898.1 mouse_genomes_project 6 89277688 89280520 + MGP_LPJ_P0078480 Copg1 protein_coding protein_coding MGP_LPJ_T0078481.1 MGP_LPJ_G0030898.1 mouse_genomes_project 6 89277700 89283568 + Copg1 protein_coding processed_transcript MGP_LPJ_T0078482.1 MGP_LPJ_G0030898.1 mouse_genomes_project 6 89277717 89284723 + Copg1 protein_coding retained_intron MGP_LPJ_T0078483.1 MGP_LPJ_G0030898.1 mouse_genomes_project 6 89283703 89292115 + Copg1 protein_coding retained_intron MGP_LPJ_T0078484.1 MGP_LPJ_G0030898.1 mouse_genomes_project 6 89284876 89285863 + Copg1 protein_coding retained_intron MGP_LPJ_T0078485.1 MGP_LPJ_G0030898.1 mouse_genomes_project 6 89285216 89294628 + Copg1 protein_coding retained_intron MGP_LPJ_T0078486.1 MGP_LPJ_G0030898.1 mouse_genomes_project 6 89285757 89302228 + Copg1 protein_coding retained_intron MGP_LPJ_T0078487.1 MGP_LPJ_G0030898.1 mouse_genomes_project 6 89287563 89292527 + Copg1 protein_coding retained_intron MGP_LPJ_T0078488.1 MGP_LPJ_G0030898.1 mouse_genomes_project 6 89298469 89299752 + Copg1 protein_coding processed_transcript MGP_LPJ_T0002065.1 MGP_LPJ_G0001975.1 mouse_genomes_project 6 83267188 83271348 - TEC TEC MGP_LPJ_T0002148.1 MGP_LPJ_G0002058.1 mouse_genomes_project 6 115972222 115975333 + TEC TEC MGP_LPJ_T0076949.1 MGP_LPJ_G0030533.1 mouse_genomes_project 6 40038448 40041741 + MGP_LPJ_P0076949 Prss2 protein_coding protein_coding MGP_LPJ_T0011663.1 MGP_LPJ_G0009781.1 mouse_genomes_project 6 51469162 51469339 + Gm27543 misc_RNA misc_RNA MGP_LPJ_T0077426.1 MGP_LPJ_G0030662.1 mouse_genomes_project 6 53618841 53620920 + Prr15 protein_coding retained_intron MGP_LPJ_T0077427.1 MGP_LPJ_G0030662.1 mouse_genomes_project 6 53619889 53623209 + MGP_LPJ_P0077427 Prr15 protein_coding protein_coding MGP_LPJ_T0004952.1 MGP_LPJ_G0004251.1 mouse_genomes_project 6 32482859 32518614 + Gm14546 antisense antisense MGP_LPJ_T0099643.1 MGP_LPJ_G0037906.1 mouse_genomes_project 6 36455055 36455159 + Gm23231 snRNA snRNA MGP_LPJ_T0079590.1 MGP_LPJ_G0031107.1 mouse_genomes_project 6 123702521 123710507 - Atp6v1e1 protein_coding retained_intron MGP_LPJ_T0079591.1 MGP_LPJ_G0031107.1 mouse_genomes_project 6 123703452 123726557 - MGP_LPJ_P0079591 Atp6v1e1 protein_coding protein_coding MGP_LPJ_T0079592.1 MGP_LPJ_G0031107.1 mouse_genomes_project 6 123703462 123722169 - MGP_LPJ_P0079592 Atp6v1e1 protein_coding protein_coding MGP_LPJ_T0079593.1 MGP_LPJ_G0031107.1 mouse_genomes_project 6 123712776 123726449 - Atp6v1e1 protein_coding retained_intron MGP_LPJ_T0079594.1 MGP_LPJ_G0031107.1 mouse_genomes_project 6 123713114 123726456 - MGP_LPJ_P0079594 Atp6v1e1 protein_coding protein_coding MGP_LPJ_T0079595.1 MGP_LPJ_G0031107.1 mouse_genomes_project 6 123716539 123726303 - MGP_LPJ_P0079595 Atp6v1e1 protein_coding protein_coding MGP_LPJ_T0076273.1 MGP_LPJ_G0030389.1 mouse_genomes_project 6 19922313 19971721 - MGP_LPJ_P0076273 Fam3c protein_coding protein_coding MGP_LPJ_T0076274.1 MGP_LPJ_G0030389.1 mouse_genomes_project 6 19922880 19971818 - MGP_LPJ_P0076274 Fam3c protein_coding protein_coding MGP_LPJ_T0076275.1 MGP_LPJ_G0030389.1 mouse_genomes_project 6 19922891 19943876 - Fam3c protein_coding processed_transcript MGP_LPJ_T0076276.1 MGP_LPJ_G0030389.1 mouse_genomes_project 6 19923758 19971696 - MGP_LPJ_P0076276 Fam3c protein_coding nonsense_mediated_decay MGP_LPJ_T0076277.1 MGP_LPJ_G0030389.1 mouse_genomes_project 6 19936721 19959536 - MGP_LPJ_P0076277 Fam3c protein_coding protein_coding MGP_LPJ_T0077618.1 MGP_LPJ_G0030724.1 mouse_genomes_project 6 58909826 58990763 - MGP_LPJ_P0077618 Gprin3 protein_coding protein_coding MGP_LPJ_T0080324.1 MGP_LPJ_G0031307.1 mouse_genomes_project 6 138386801 138632331 + MGP_LPJ_P0080324 Etv6 protein_coding protein_coding MGP_LPJ_T0080325.1 MGP_LPJ_G0031307.1 mouse_genomes_project 6 138387069 138609806 + MGP_LPJ_P0080325 Etv6 protein_coding protein_coding MGP_LPJ_T0080326.1 MGP_LPJ_G0031307.1 mouse_genomes_project 6 138494187 138628640 + MGP_LPJ_P0080326 Etv6 protein_coding protein_coding MGP_LPJ_T0080327.1 MGP_LPJ_G0031307.1 mouse_genomes_project 6 138595116 138623445 + Etv6 protein_coding retained_intron MGP_LPJ_T0080328.1 MGP_LPJ_G0031307.1 mouse_genomes_project 6 138609086 138610079 + Etv6 protein_coding processed_transcript MGP_LPJ_T0000218.1 MGP_LPJ_G0000165.1 mouse_genomes_project 6 70193046 70193559 - MGP_LPJ_P0000218 Igkv18-36 IG_V_gene IG_V_gene MGP_LPJ_T0000219.1 MGP_LPJ_G0000165.1 mouse_genomes_project 6 70193046 70193559 - MGP_LPJ_P0000219 Igkv18-36 IG_V_gene IG_V_gene MGP_LPJ_T0077354.1 MGP_LPJ_G0030648.1 mouse_genomes_project 6 51426195 51428604 - MGP_LPJ_P0077354 Hoxa6 protein_coding protein_coding MGP_LPJ_T0015498.1 MGP_LPJ_G0013589.1 mouse_genomes_project 6 115520206 115520681 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015324.1 MGP_LPJ_G0013415.1 mouse_genomes_project 6 60585481 60586006 - processed_pseudogene processed_pseudogene MGP_LPJ_T0078902.1 MGP_LPJ_G0030985.1 mouse_genomes_project 6 102656433 102767094 - MGP_LPJ_P0078902 Shq1 protein_coding protein_coding MGP_LPJ_T0078903.1 MGP_LPJ_G0030985.1 mouse_genomes_project 6 102661065 102767094 - MGP_LPJ_P0078903 Shq1 protein_coding protein_coding MGP_LPJ_T0078904.1 MGP_LPJ_G0030985.1 mouse_genomes_project 6 102661066 102767076 - MGP_LPJ_P0078904 Shq1 protein_coding protein_coding MGP_LPJ_T0078905.1 MGP_LPJ_G0030985.1 mouse_genomes_project 6 102758778 102767070 - Shq1 protein_coding processed_transcript MGP_LPJ_T0076957.1 MGP_LPJ_G0030536.1 mouse_genomes_project 6 40170672 40200200 - MGP_LPJ_P0076957 Trpv5 protein_coding protein_coding MGP_LPJ_T0076958.1 MGP_LPJ_G0030536.1 mouse_genomes_project 6 40171629 40200086 - MGP_LPJ_P0076958 Trpv5 protein_coding protein_coding MGP_LPJ_T0008773.1 MGP_LPJ_G0007088.1 mouse_genomes_project 6 144339425 144342686 - Gm44272 lincRNA lincRNA MGP_LPJ_T0099685.1 MGP_LPJ_G0037948.1 mouse_genomes_project 6 134224560 134224625 + Gm22555 snRNA snRNA MGP_LPJ_T0015575.1 MGP_LPJ_G0013666.1 mouse_genomes_project 6 134533326 134533432 - processed_pseudogene processed_pseudogene MGP_LPJ_T0076016.1 MGP_LPJ_G0030342.1 mouse_genomes_project 6 2535324 2849257 + MGP_LPJ_P0076016 Dync1i1 protein_coding protein_coding MGP_LPJ_T0076017.1 MGP_LPJ_G0030342.1 mouse_genomes_project 6 2535448 2849248 + MGP_LPJ_P0076017 Dync1i1 protein_coding protein_coding MGP_LPJ_T0076018.1 MGP_LPJ_G0030342.1 mouse_genomes_project 6 2535476 2849257 + MGP_LPJ_P0076018 Dync1i1 protein_coding protein_coding MGP_LPJ_T0076019.1 MGP_LPJ_G0030342.1 mouse_genomes_project 6 2535497 2849257 + MGP_LPJ_P0076019 Dync1i1 protein_coding protein_coding MGP_LPJ_T0076020.1 MGP_LPJ_G0030342.1 mouse_genomes_project 6 2535503 2575972 + MGP_LPJ_P0076020 Dync1i1 protein_coding protein_coding MGP_LPJ_T0076021.1 MGP_LPJ_G0030342.1 mouse_genomes_project 6 2566311 2594485 + MGP_LPJ_P0076021 Dync1i1 protein_coding protein_coding MGP_LPJ_T0076022.1 MGP_LPJ_G0030342.1 mouse_genomes_project 6 2826542 2849005 + Dync1i1 protein_coding retained_intron MGP_LPJ_T0015424.1 MGP_LPJ_G0013515.1 mouse_genomes_project 6 86181273 86182114 + processed_pseudogene processed_pseudogene MGP_LPJ_T0078084.1 MGP_LPJ_G0030824.1 mouse_genomes_project 6 84167496 84209340 + MGP_LPJ_P0078084 Dctn1 protein_coding protein_coding MGP_LPJ_T0078085.1 MGP_LPJ_G0030824.1 mouse_genomes_project 6 84167527 84209341 + MGP_LPJ_P0078085 Dctn1 protein_coding protein_coding MGP_LPJ_T0078086.1 MGP_LPJ_G0030824.1 mouse_genomes_project 6 84167580 84197684 + MGP_LPJ_P0078086 Dctn1 protein_coding protein_coding MGP_LPJ_T0078087.1 MGP_LPJ_G0030824.1 mouse_genomes_project 6 84185282 84209194 + MGP_LPJ_P0078087 Dctn1 protein_coding protein_coding MGP_LPJ_T0078088.1 MGP_LPJ_G0030824.1 mouse_genomes_project 6 84185285 84209340 + MGP_LPJ_P0078088 Dctn1 protein_coding protein_coding MGP_LPJ_T0078089.1 MGP_LPJ_G0030824.1 mouse_genomes_project 6 84185309 84197255 + MGP_LPJ_P0078089 Dctn1 protein_coding protein_coding MGP_LPJ_T0078090.1 MGP_LPJ_G0030824.1 mouse_genomes_project 6 84194047 84209341 + MGP_LPJ_P0078090 Dctn1 protein_coding protein_coding MGP_LPJ_T0078091.1 MGP_LPJ_G0030824.1 mouse_genomes_project 6 84196712 84197709 + Dctn1 protein_coding retained_intron MGP_LPJ_T0078092.1 MGP_LPJ_G0030824.1 mouse_genomes_project 6 84202464 84203701 + Dctn1 protein_coding retained_intron MGP_LPJ_T0078093.1 MGP_LPJ_G0030824.1 mouse_genomes_project 6 84202663 84203408 + Dctn1 protein_coding retained_intron MGP_LPJ_T0078094.1 MGP_LPJ_G0030824.1 mouse_genomes_project 6 84203222 84204189 + Dctn1 protein_coding retained_intron MGP_LPJ_T0078095.1 MGP_LPJ_G0030824.1 mouse_genomes_project 6 84205134 84206737 + Dctn1 protein_coding retained_intron MGP_LPJ_T0077671.1 MGP_LPJ_G0030734.1 mouse_genomes_project 6 65529097 65570532 + MGP_LPJ_P0077671 Ndnf protein_coding protein_coding MGP_LPJ_T0077672.1 MGP_LPJ_G0030734.1 mouse_genomes_project 6 65559635 65561646 + Ndnf protein_coding retained_intron MGP_LPJ_T0008722.1 MGP_LPJ_G0007049.1 mouse_genomes_project 6 118170340 118181954 - Gm44082 lincRNA lincRNA MGP_LPJ_T0008760.1 MGP_LPJ_G0007080.1 mouse_genomes_project 6 138774736 138794870 - Gm44448 lincRNA lincRNA MGP_LPJ_T0077169.1 MGP_LPJ_G0030600.1 mouse_genomes_project 6 47498723 47501674 - Rarres2 protein_coding retained_intron MGP_LPJ_T0077170.1 MGP_LPJ_G0030600.1 mouse_genomes_project 6 47498723 47501716 - MGP_LPJ_P0077170 Rarres2 protein_coding protein_coding MGP_LPJ_T0077171.1 MGP_LPJ_G0030600.1 mouse_genomes_project 6 47498723 47501783 - MGP_LPJ_P0077171 Rarres2 protein_coding protein_coding MGP_LPJ_T0077172.1 MGP_LPJ_G0030600.1 mouse_genomes_project 6 47498723 47501815 - MGP_LPJ_P0077172 Rarres2 protein_coding protein_coding MGP_LPJ_T0077173.1 MGP_LPJ_G0030600.1 mouse_genomes_project 6 47498737 47501817 - MGP_LPJ_P0077173 Rarres2 protein_coding protein_coding MGP_LPJ_T0015295.1 MGP_LPJ_G0013386.1 mouse_genomes_project 6 48267803 48268368 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005112.1 MGP_LPJ_G0004362.1 mouse_genomes_project 6 130718007 130722530 + Gm43126 antisense antisense MGP_LPJ_T0076984.1 MGP_LPJ_G0030548.1 mouse_genomes_project 6 40736244 40738830 + MGP_LPJ_P0076984 Tmem139 protein_coding protein_coding MGP_LPJ_T0077860.1 MGP_LPJ_G0030775.1 mouse_genomes_project 6 72874792 72891197 + MGP_LPJ_P0077860 Ggcx protein_coding protein_coding MGP_LPJ_T0077861.1 MGP_LPJ_G0030775.1 mouse_genomes_project 6 72874825 72890886 + MGP_LPJ_P0077861 Ggcx protein_coding nonsense_mediated_decay MGP_LPJ_T0077862.1 MGP_LPJ_G0030775.1 mouse_genomes_project 6 72878339 72890727 + MGP_LPJ_P0077862 Ggcx protein_coding nonsense_mediated_decay MGP_LPJ_T0077863.1 MGP_LPJ_G0030775.1 mouse_genomes_project 6 72878390 72884525 + MGP_LPJ_P0077863 Ggcx protein_coding nonsense_mediated_decay MGP_LPJ_T0077864.1 MGP_LPJ_G0030775.1 mouse_genomes_project 6 72887101 72889743 + MGP_LPJ_P0077864 Ggcx protein_coding nonsense_mediated_decay MGP_LPJ_T0010803.1 MGP_LPJ_G0008921.1 mouse_genomes_project 6 87023298 87023393 - Mir6375 miRNA miRNA MGP_LPJ_T0002211.1 MGP_LPJ_G0002120.1 mouse_genomes_project 6 153392369 153395848 + TEC TEC MGP_LPJ_T0076523.1 MGP_LPJ_G0030439.1 mouse_genomes_project 6 28211006 28309979 - MGP_LPJ_P0076523 Ube2h protein_coding unknown_likely_coding MGP_LPJ_T0076524.1 MGP_LPJ_G0030439.1 mouse_genomes_project 6 28219605 28312518 - Ube2h protein_coding processed_transcript MGP_LPJ_T0077730.1 MGP_LPJ_G0030750.1 mouse_genomes_project 6 71331901 71336424 + MGP_LPJ_P0077730 Foxi3 protein_coding protein_coding MGP_LPJ_T0077731.1 MGP_LPJ_G0030750.1 mouse_genomes_project 6 71331976 71336427 + MGP_LPJ_P0077731 Foxi3 protein_coding protein_coding MGP_LPJ_T0102218.1 MGP_LPJ_G0040255.1 mouse_genomes_project 6 41227710 41228058 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0078640.1 MGP_LPJ_G0030936.1 mouse_genomes_project 6 91914315 91941978 - MGP_LPJ_P0078640 Cfap100 protein_coding nonsense_mediated_decay MGP_LPJ_T0078641.1 MGP_LPJ_G0030936.1 mouse_genomes_project 6 91914572 91941623 - MGP_LPJ_P0078641 Cfap100 protein_coding protein_coding MGP_LPJ_T0078642.1 MGP_LPJ_G0030936.1 mouse_genomes_project 6 91914573 91941609 - MGP_LPJ_P0078642 Cfap100 protein_coding unknown_likely_coding MGP_LPJ_T0078643.1 MGP_LPJ_G0030936.1 mouse_genomes_project 6 91914574 91941604 - MGP_LPJ_P0078643 Cfap100 protein_coding protein_coding MGP_LPJ_T0078644.1 MGP_LPJ_G0030936.1 mouse_genomes_project 6 91932675 91941988 - MGP_LPJ_P0078644 Cfap100 protein_coding protein_coding MGP_LPJ_T0078645.1 MGP_LPJ_G0030936.1 mouse_genomes_project 6 91932888 91941626 - MGP_LPJ_P0078645 Cfap100 protein_coding protein_coding MGP_LPJ_T0078646.1 MGP_LPJ_G0030936.1 mouse_genomes_project 6 91939674 91941586 - MGP_LPJ_P0078646 Cfap100 protein_coding protein_coding MGP_LPJ_T0078647.1 MGP_LPJ_G0030936.1 mouse_genomes_project 6 91941086 91941776 - Cfap100 protein_coding processed_transcript MGP_LPJ_T0099673.1 MGP_LPJ_G0037936.1 mouse_genomes_project 6 115599166 115599272 + Gm22591 snRNA snRNA MGP_LPJ_T0078004.1 MGP_LPJ_G0030809.1 mouse_genomes_project 6 84048847 84052154 - MGP_LPJ_P0078004 Htra2 protein_coding protein_coding MGP_LPJ_T0078005.1 MGP_LPJ_G0030809.1 mouse_genomes_project 6 84048847 84052154 - MGP_LPJ_P0078005 Htra2 protein_coding protein_coding MGP_LPJ_T0078006.1 MGP_LPJ_G0030809.1 mouse_genomes_project 6 84048847 84052025 - MGP_LPJ_P0078006 Htra2 protein_coding protein_coding MGP_LPJ_T0078007.1 MGP_LPJ_G0030809.1 mouse_genomes_project 6 84048861 84052154 - MGP_LPJ_P0078007 Htra2 protein_coding nonsense_mediated_decay MGP_LPJ_T0078008.1 MGP_LPJ_G0030809.1 mouse_genomes_project 6 84048865 84052856 - Htra2 protein_coding retained_intron MGP_LPJ_T0078009.1 MGP_LPJ_G0030809.1 mouse_genomes_project 6 84048968 84051269 - MGP_LPJ_P0078009 Htra2 protein_coding nonsense_mediated_decay MGP_LPJ_T0078010.1 MGP_LPJ_G0030809.1 mouse_genomes_project 6 84049058 84051420 - MGP_LPJ_P0078010 Htra2 protein_coding protein_coding MGP_LPJ_T0078011.1 MGP_LPJ_G0030809.1 mouse_genomes_project 6 84049067 84051420 - Htra2 protein_coding retained_intron MGP_LPJ_T0078012.1 MGP_LPJ_G0030809.1 mouse_genomes_project 6 84049331 84051620 - MGP_LPJ_P0078012 Htra2 protein_coding protein_coding MGP_LPJ_T0078013.1 MGP_LPJ_G0030809.1 mouse_genomes_project 6 84050620 84052748 - Htra2 protein_coding processed_transcript MGP_LPJ_T0078014.1 MGP_LPJ_G0030809.1 mouse_genomes_project 6 84050729 84051468 - Htra2 protein_coding processed_transcript MGP_LPJ_T0008616.1 MGP_LPJ_G0006964.1 mouse_genomes_project 6 51484291 51489118 + Hottip lincRNA lincRNA MGP_LPJ_T0008617.1 MGP_LPJ_G0006964.1 mouse_genomes_project 6 51484300 51488594 + Hottip lincRNA lincRNA MGP_LPJ_T0080051.1 MGP_LPJ_G0031203.1 mouse_genomes_project 6 130279890 130314963 - MGP_LPJ_P0080051 Kcna6 protein_coding nonsense_mediated_decay MGP_LPJ_T0080052.1 MGP_LPJ_G0031203.1 mouse_genomes_project 6 130279892 130311112 - Kcna6 protein_coding processed_transcript MGP_LPJ_T0080053.1 MGP_LPJ_G0031203.1 mouse_genomes_project 6 130279893 130314975 - MGP_LPJ_P0080053 Kcna6 protein_coding protein_coding MGP_LPJ_T0080054.1 MGP_LPJ_G0031203.1 mouse_genomes_project 6 130310988 130314452 - MGP_LPJ_P0080054 Kcna6 protein_coding protein_coding MGP_LPJ_T0080402.1 MGP_LPJ_G0031324.1 mouse_genomes_project 6 139793820 139817635 + MGP_LPJ_P0080402 Emp1 protein_coding protein_coding MGP_LPJ_T0080403.1 MGP_LPJ_G0031324.1 mouse_genomes_project 6 139794210 139817635 + MGP_LPJ_P0080403 Emp1 protein_coding protein_coding MGP_LPJ_T0080404.1 MGP_LPJ_G0031324.1 mouse_genomes_project 6 139794210 139817635 + MGP_LPJ_P0080404 Emp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0080405.1 MGP_LPJ_G0031324.1 mouse_genomes_project 6 139794287 139814838 + Emp1 protein_coding retained_intron MGP_LPJ_T0080406.1 MGP_LPJ_G0031324.1 mouse_genomes_project 6 139794347 139796970 + Emp1 protein_coding retained_intron MGP_LPJ_T0080407.1 MGP_LPJ_G0031324.1 mouse_genomes_project 6 139798801 139817635 + MGP_LPJ_P0080407 Emp1 protein_coding protein_coding MGP_LPJ_T0015311.1 MGP_LPJ_G0013402.1 mouse_genomes_project 6 53464780 53465035 - processed_pseudogene processed_pseudogene MGP_LPJ_T0080811.1 MGP_LPJ_G0031400.1 mouse_genomes_project 6 152065306 152069399 - MGP_LPJ_P0080811 1700034J05Rik protein_coding protein_coding MGP_LPJ_T0080812.1 MGP_LPJ_G0031400.1 mouse_genomes_project 6 152066277 152069391 - MGP_LPJ_P0080812 1700034J05Rik protein_coding protein_coding MGP_LPJ_T0002076.1 MGP_LPJ_G0001986.1 mouse_genomes_project 6 87830178 87831916 + TEC TEC MGP_LPJ_T0098296.1 MGP_LPJ_G0036577.1 mouse_genomes_project 6 145150159 145150263 + n-R5s168 rRNA rRNA MGP_LPJ_T0099669.1 MGP_LPJ_G0037932.1 mouse_genomes_project 6 106037933 106037999 - Gm25656 snRNA snRNA MGP_LPJ_T0076191.1 MGP_LPJ_G0030376.1 mouse_genomes_project 6 14977775 14999287 + Capza2 protein_coding processed_transcript MGP_LPJ_T0076192.1 MGP_LPJ_G0030376.1 mouse_genomes_project 6 14978532 15011501 + MGP_LPJ_P0076192 Capza2 protein_coding protein_coding MGP_LPJ_T0076193.1 MGP_LPJ_G0030376.1 mouse_genomes_project 6 14978584 15004130 + Capza2 protein_coding retained_intron MGP_LPJ_T0076194.1 MGP_LPJ_G0030376.1 mouse_genomes_project 6 14978591 14999237 + Capza2 protein_coding processed_transcript MGP_LPJ_T0076195.1 MGP_LPJ_G0030376.1 mouse_genomes_project 6 14978659 15010123 + MGP_LPJ_P0076195 Capza2 protein_coding nonsense_mediated_decay MGP_LPJ_T0076196.1 MGP_LPJ_G0030376.1 mouse_genomes_project 6 14978662 15005295 + MGP_LPJ_P0076196 Capza2 protein_coding protein_coding MGP_LPJ_T0076197.1 MGP_LPJ_G0030376.1 mouse_genomes_project 6 15005090 15010213 + Capza2 protein_coding retained_intron MGP_LPJ_T0078653.1 MGP_LPJ_G0030938.1 mouse_genomes_project 6 91995128 92072779 + Aldh1l1 protein_coding processed_transcript MGP_LPJ_T0078654.1 MGP_LPJ_G0030938.1 mouse_genomes_project 6 92064194 92114971 + MGP_LPJ_P0078654 Aldh1l1 protein_coding protein_coding MGP_LPJ_T0078655.1 MGP_LPJ_G0030938.1 mouse_genomes_project 6 92064210 92113937 + MGP_LPJ_P0078655 Aldh1l1 protein_coding protein_coding MGP_LPJ_T0078656.1 MGP_LPJ_G0030938.1 mouse_genomes_project 6 92064248 92073354 + MGP_LPJ_P0078656 Aldh1l1 protein_coding protein_coding MGP_LPJ_T0078657.1 MGP_LPJ_G0030938.1 mouse_genomes_project 6 92064253 92113928 + MGP_LPJ_P0078657 Aldh1l1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078658.1 MGP_LPJ_G0030938.1 mouse_genomes_project 6 92081088 92084267 + Aldh1l1 protein_coding processed_transcript MGP_LPJ_T0078659.1 MGP_LPJ_G0030938.1 mouse_genomes_project 6 92104117 92111842 + Aldh1l1 protein_coding retained_intron MGP_LPJ_T0002059.1 MGP_LPJ_G0001969.1 mouse_genomes_project 6 81142751 81144507 + TEC TEC MGP_LPJ_T0001983.1 MGP_LPJ_G0001893.1 mouse_genomes_project 6 38679567 38682394 + TEC TEC MGP_LPJ_T0076013.1 MGP_LPJ_G0030341.1 mouse_genomes_project 6 2283157 2301388 - MGP_LPJ_P0076013 Pdk4 protein_coding protein_coding MGP_LPJ_T0076014.1 MGP_LPJ_G0030341.1 mouse_genomes_project 6 2294708 2301340 - MGP_LPJ_P0076014 Pdk4 protein_coding protein_coding MGP_LPJ_T0076015.1 MGP_LPJ_G0030341.1 mouse_genomes_project 6 2297980 2301354 - Pdk4 protein_coding retained_intron MGP_LPJ_T0076007.1 MGP_LPJ_G0030339.1 mouse_genomes_project 6 2053588 2090602 - MGP_LPJ_P0076007 Pon2 protein_coding protein_coding MGP_LPJ_T0076008.1 MGP_LPJ_G0030339.1 mouse_genomes_project 6 2059594 2090477 - Pon2 protein_coding retained_intron MGP_LPJ_T0076009.1 MGP_LPJ_G0030339.1 mouse_genomes_project 6 2064455 2080360 - Pon2 protein_coding processed_transcript MGP_LPJ_T0076010.1 MGP_LPJ_G0030339.1 mouse_genomes_project 6 2068852 2071690 - Pon2 protein_coding retained_intron MGP_LPJ_T0015317.1 MGP_LPJ_G0013408.1 mouse_genomes_project 6 57990808 57991238 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101579.1 MGP_LPJ_G0039668.1 mouse_genomes_project 6 124798911 125239304 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0077268.1 MGP_LPJ_G0030627.1 mouse_genomes_project 6 48352364 48361549 + MGP_LPJ_P0077268 Fam221a protein_coding protein_coding MGP_LPJ_T0077269.1 MGP_LPJ_G0030627.1 mouse_genomes_project 6 48352377 48378800 + MGP_LPJ_P0077269 Fam221a protein_coding protein_coding MGP_LPJ_T0077270.1 MGP_LPJ_G0030627.1 mouse_genomes_project 6 48365655 48375370 + Fam221a protein_coding processed_transcript MGP_LPJ_T0077271.1 MGP_LPJ_G0030627.1 mouse_genomes_project 6 48375166 48379188 + Fam221a protein_coding retained_intron MGP_LPJ_T0077272.1 MGP_LPJ_G0030627.1 mouse_genomes_project 6 48377393 48379133 + Fam221a protein_coding retained_intron MGP_LPJ_T0077890.1 MGP_LPJ_G0030779.1 mouse_genomes_project 6 73038050 73070545 - MGP_LPJ_P0077890 Elmod3 protein_coding protein_coding MGP_LPJ_T0077891.1 MGP_LPJ_G0030779.1 mouse_genomes_project 6 73038062 73070546 - MGP_LPJ_P0077891 Elmod3 protein_coding protein_coding MGP_LPJ_T0077892.1 MGP_LPJ_G0030779.1 mouse_genomes_project 6 73039678 73070598 - MGP_LPJ_P0077892 Elmod3 protein_coding protein_coding MGP_LPJ_T0077893.1 MGP_LPJ_G0030779.1 mouse_genomes_project 6 73041456 73070564 - MGP_LPJ_P0077893 Elmod3 protein_coding protein_coding MGP_LPJ_T0077894.1 MGP_LPJ_G0030779.1 mouse_genomes_project 6 73056651 73067214 - Elmod3 protein_coding processed_transcript MGP_LPJ_T0077895.1 MGP_LPJ_G0030779.1 mouse_genomes_project 6 73059817 73070616 - MGP_LPJ_P0077895 Elmod3 protein_coding protein_coding MGP_LPJ_T0015613.1 MGP_LPJ_G0013704.1 mouse_genomes_project 6 145654748 145654954 - processed_pseudogene processed_pseudogene MGP_LPJ_T0076428.1 MGP_LPJ_G0030427.1 mouse_genomes_project 6 27321481 27324622 + Ccdc136 protein_coding processed_transcript MGP_LPJ_T0076429.1 MGP_LPJ_G0030427.1 mouse_genomes_project 6 27321802 27352106 + MGP_LPJ_P0076429 Ccdc136 protein_coding protein_coding MGP_LPJ_T0076430.1 MGP_LPJ_G0030427.1 mouse_genomes_project 6 27321815 27352101 + MGP_LPJ_P0076430 Ccdc136 protein_coding protein_coding MGP_LPJ_T0076431.1 MGP_LPJ_G0030427.1 mouse_genomes_project 6 27321857 27352147 + MGP_LPJ_P0076431 Ccdc136 protein_coding protein_coding MGP_LPJ_T0076432.1 MGP_LPJ_G0030427.1 mouse_genomes_project 6 27321857 27347245 + MGP_LPJ_P0076432 Ccdc136 protein_coding unknown_likely_coding MGP_LPJ_T0076433.1 MGP_LPJ_G0030427.1 mouse_genomes_project 6 27324098 27352101 + MGP_LPJ_P0076433 Ccdc136 protein_coding protein_coding MGP_LPJ_T0076434.1 MGP_LPJ_G0030427.1 mouse_genomes_project 6 27324098 27352108 + MGP_LPJ_P0076434 Ccdc136 protein_coding protein_coding MGP_LPJ_T0076435.1 MGP_LPJ_G0030427.1 mouse_genomes_project 6 27328040 27352010 + MGP_LPJ_P0076435 Ccdc136 protein_coding protein_coding MGP_LPJ_T0076436.1 MGP_LPJ_G0030427.1 mouse_genomes_project 6 27335257 27352141 + MGP_LPJ_P0076436 Ccdc136 protein_coding protein_coding MGP_LPJ_T0076437.1 MGP_LPJ_G0030427.1 mouse_genomes_project 6 27337636 27352105 + Ccdc136 protein_coding processed_transcript MGP_LPJ_T0076438.1 MGP_LPJ_G0030427.1 mouse_genomes_project 6 27340104 27352107 + Ccdc136 protein_coding processed_transcript MGP_LPJ_T0080209.1 MGP_LPJ_G0031245.1 mouse_genomes_project 6 133282638 133291396 + MGP_LPJ_P0080209 Clec1b protein_coding protein_coding MGP_LPJ_T0080210.1 MGP_LPJ_G0031245.1 mouse_genomes_project 6 133282646 133291384 + MGP_LPJ_P0080210 Clec1b protein_coding protein_coding MGP_LPJ_T0080211.1 MGP_LPJ_G0031245.1 mouse_genomes_project 6 133288581 133296963 + Clec1b protein_coding retained_intron MGP_LPJ_T0080522.1 MGP_LPJ_G0031346.1 mouse_genomes_project 6 143073092 143310615 - MGP_LPJ_P0080522 Lmo3 protein_coding protein_coding MGP_LPJ_T0080523.1 MGP_LPJ_G0031346.1 mouse_genomes_project 6 143074377 143134554 - MGP_LPJ_P0080523 Lmo3 protein_coding protein_coding MGP_LPJ_T0080524.1 MGP_LPJ_G0031346.1 mouse_genomes_project 6 143075136 143137661 - MGP_LPJ_P0080524 Lmo3 protein_coding nonsense_mediated_decay MGP_LPJ_T0080525.1 MGP_LPJ_G0031346.1 mouse_genomes_project 6 143075765 143136056 - MGP_LPJ_P0080525 Lmo3 protein_coding protein_coding MGP_LPJ_T0080526.1 MGP_LPJ_G0031346.1 mouse_genomes_project 6 143075769 143135999 - MGP_LPJ_P0080526 Lmo3 protein_coding protein_coding MGP_LPJ_T0080527.1 MGP_LPJ_G0031346.1 mouse_genomes_project 6 143076073 143140206 - MGP_LPJ_P0080527 Lmo3 protein_coding protein_coding MGP_LPJ_T0080528.1 MGP_LPJ_G0031346.1 mouse_genomes_project 6 143087918 143136081 - MGP_LPJ_P0080528 Lmo3 protein_coding protein_coding MGP_LPJ_T0080529.1 MGP_LPJ_G0031346.1 mouse_genomes_project 6 143129842 143139860 - MGP_LPJ_P0080529 Lmo3 protein_coding protein_coding MGP_LPJ_T0100916.1 MGP_LPJ_G0039179.1 mouse_genomes_project 6 107533928 107534067 + Gm23339 snoRNA snoRNA MGP_LPJ_T0015330.1 MGP_LPJ_G0013421.1 mouse_genomes_project 6 62394626 62394863 + processed_pseudogene processed_pseudogene MGP_LPJ_T0079307.1 MGP_LPJ_G0031059.1 mouse_genomes_project 6 118596094 118601359 + MGP_LPJ_P0079307 H1foo protein_coding nonsense_mediated_decay MGP_LPJ_T0079308.1 MGP_LPJ_G0031059.1 mouse_genomes_project 6 118596094 118601364 + MGP_LPJ_P0079308 H1foo protein_coding protein_coding MGP_LPJ_T0079309.1 MGP_LPJ_G0031059.1 mouse_genomes_project 6 118596094 118601359 + MGP_LPJ_P0079309 H1foo protein_coding protein_coding MGP_LPJ_T0079310.1 MGP_LPJ_G0031059.1 mouse_genomes_project 6 118596109 118601049 + MGP_LPJ_P0079310 H1foo protein_coding protein_coding MGP_LPJ_T0079311.1 MGP_LPJ_G0031059.1 mouse_genomes_project 6 118599884 118601353 + MGP_LPJ_P0079311 H1foo protein_coding protein_coding MGP_LPJ_T0008577.1 MGP_LPJ_G0006940.1 mouse_genomes_project 6 33859876 33864457 - Gm42931 lincRNA lincRNA MGP_LPJ_T0080387.1 MGP_LPJ_G0031319.1 mouse_genomes_project 6 139525393 139537348 - MGP_LPJ_P0080387 Gprc5d protein_coding protein_coding MGP_LPJ_T0080388.1 MGP_LPJ_G0031319.1 mouse_genomes_project 6 139525393 139537311 - MGP_LPJ_P0080388 Gprc5d protein_coding protein_coding MGP_LPJ_T0080292.1 MGP_LPJ_G0031280.1 mouse_genomes_project 6 135984306 135985236 - MGP_LPJ_P0080292 Tas2r114 protein_coding protein_coding MGP_LPJ_T0001961.1 MGP_LPJ_G0001871.1 mouse_genomes_project 6 22389461 22392344 - TEC TEC MGP_LPJ_T0079753.1 MGP_LPJ_G0031148.1 mouse_genomes_project 6 127770117 127796493 + MGP_LPJ_P0079753 Cd163 protein_coding protein_coding MGP_LPJ_T0079754.1 MGP_LPJ_G0031148.1 mouse_genomes_project 6 127770161 127796493 + MGP_LPJ_P0079754 Cd163 protein_coding protein_coding MGP_LPJ_T0079755.1 MGP_LPJ_G0031148.1 mouse_genomes_project 6 127786456 127796485 + Cd163 protein_coding retained_intron MGP_LPJ_T0015400.1 MGP_LPJ_G0013491.1 mouse_genomes_project 6 75840083 75841066 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015210.1 MGP_LPJ_G0013301.1 mouse_genomes_project 6 13351766 13352040 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008562.1 MGP_LPJ_G0006928.1 mouse_genomes_project 6 29774420 29785381 + lincRNA lincRNA MGP_LPJ_T0098649.1 MGP_LPJ_G0036919.1 mouse_genomes_project 6 38569844 38582113 + Gm26638 sense_intronic sense_intronic MGP_LPJ_T0078707.1 MGP_LPJ_G0030947.1 mouse_genomes_project 6 93043980 93070547 - MGP_LPJ_P0078707 Xpc protein_coding protein_coding MGP_LPJ_T0078708.1 MGP_LPJ_G0030947.1 mouse_genomes_project 6 93046948 93070454 - MGP_LPJ_P0078708 Xpc protein_coding nonsense_mediated_decay MGP_LPJ_T0078709.1 MGP_LPJ_G0030947.1 mouse_genomes_project 6 93061575 93070543 - MGP_LPJ_P0078709 Xpc protein_coding protein_coding MGP_LPJ_T0015354.1 MGP_LPJ_G0013445.1 mouse_genomes_project 6 66366339 66366988 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015212.1 MGP_LPJ_G0013303.1 mouse_genomes_project 6 13506069 13506681 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008512.1 MGP_LPJ_G0006895.1 mouse_genomes_project 6 3352523 3367995 + lincRNA lincRNA MGP_LPJ_T0010838.1 MGP_LPJ_G0008956.1 mouse_genomes_project 6 133573425 133573534 + Mir680-1 miRNA miRNA MGP_LPJ_T0076360.1 MGP_LPJ_G0030413.1 mouse_genomes_project 6 26284521 26287470 + MGP_LPJ_P0076360 Arf5 protein_coding protein_coding MGP_LPJ_T0076361.1 MGP_LPJ_G0030413.1 mouse_genomes_project 6 26284545 26287205 + MGP_LPJ_P0076361 Arf5 protein_coding protein_coding MGP_LPJ_T0076362.1 MGP_LPJ_G0030413.1 mouse_genomes_project 6 26284664 26285581 + Arf5 protein_coding retained_intron MGP_LPJ_T0101558.1 MGP_LPJ_G0039662.1 mouse_genomes_project 6 41601310 41643456 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101559.1 MGP_LPJ_G0039662.1 mouse_genomes_project 6 41642249 41643221 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0077369.1 MGP_LPJ_G0030652.1 mouse_genomes_project 6 51461963 51465673 - MGP_LPJ_P0077369 Hoxa11 protein_coding protein_coding MGP_LPJ_T0077370.1 MGP_LPJ_G0030652.1 mouse_genomes_project 6 51461967 51465658 - Hoxa11 protein_coding processed_transcript MGP_LPJ_T0010800.1 MGP_LPJ_G0008918.1 mouse_genomes_project 6 84088919 84088996 - Mir3470a miRNA miRNA MGP_LPJ_T0008611.1 MGP_LPJ_G0006961.1 mouse_genomes_project 6 50871686 50888459 - Gm44191 lincRNA lincRNA MGP_LPJ_T0015551.1 MGP_LPJ_G0013642.1 mouse_genomes_project 6 129263818 129264208 + processed_pseudogene processed_pseudogene MGP_LPJ_T0078433.1 MGP_LPJ_G0030886.1 mouse_genomes_project 6 88736771 88742922 + MGP_LPJ_P0078433 Gkn2 protein_coding protein_coding MGP_LPJ_T0005127.1 MGP_LPJ_G0004374.1 mouse_genomes_project 6 139144355 139146346 + antisense antisense MGP_LPJ_T0078602.1 MGP_LPJ_G0030915.1 mouse_genomes_project 6 90796631 90839469 - MGP_LPJ_P0078602 Plxna1 protein_coding protein_coding MGP_LPJ_T0078603.1 MGP_LPJ_G0030915.1 mouse_genomes_project 6 90802426 90802892 - Plxna1 protein_coding retained_intron MGP_LPJ_T0078604.1 MGP_LPJ_G0030915.1 mouse_genomes_project 6 90804317 90806436 - MGP_LPJ_P0078604 Plxna1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078605.1 MGP_LPJ_G0030915.1 mouse_genomes_project 6 90812180 90814874 - Plxna1 protein_coding processed_transcript MGP_LPJ_T0078606.1 MGP_LPJ_G0030915.1 mouse_genomes_project 6 90817214 90824393 - MGP_LPJ_P0078606 Plxna1 protein_coding nonsense_mediated_decay MGP_LPJ_T0077343.1 MGP_LPJ_G0030641.1 mouse_genomes_project 6 51369909 51372637 - MGP_LPJ_P0077343 Hoxa1 protein_coding protein_coding MGP_LPJ_T0077344.1 MGP_LPJ_G0030641.1 mouse_genomes_project 6 51369914 51372637 - MGP_LPJ_P0077344 Hoxa1 protein_coding protein_coding MGP_LPJ_T0100943.1 MGP_LPJ_G0039206.1 mouse_genomes_project 6 154218025 154218147 + Gm25539 snoRNA snoRNA MGP_LPJ_T0018200.1 MGP_LPJ_G0015544.1 mouse_genomes_project 6 47675044 47677319 - Gimap1os processed_transcript antisense MGP_LPJ_T0018201.1 MGP_LPJ_G0015544.1 mouse_genomes_project 6 47676198 47678142 - Gimap1os processed_transcript retained_intron MGP_LPJ_T0077273.1 MGP_LPJ_G0030628.1 mouse_genomes_project 6 48385511 48478284 + MGP_LPJ_P0077273 Stk31 protein_coding protein_coding MGP_LPJ_T0077274.1 MGP_LPJ_G0030628.1 mouse_genomes_project 6 48385542 48478135 + MGP_LPJ_P0077274 Stk31 protein_coding protein_coding MGP_LPJ_T0077275.1 MGP_LPJ_G0030628.1 mouse_genomes_project 6 48385542 48478135 + MGP_LPJ_P0077275 Stk31 protein_coding protein_coding MGP_LPJ_T0077276.1 MGP_LPJ_G0030628.1 mouse_genomes_project 6 48387944 48478135 + MGP_LPJ_P0077276 Stk31 protein_coding unknown_likely_coding MGP_LPJ_T0077277.1 MGP_LPJ_G0030628.1 mouse_genomes_project 6 48439899 48478283 + MGP_LPJ_P0077277 Stk31 protein_coding protein_coding MGP_LPJ_T0010788.1 MGP_LPJ_G0008906.1 mouse_genomes_project 6 50408430 50408529 - Mir148a miRNA miRNA MGP_LPJ_T0005133.1 MGP_LPJ_G0004380.1 mouse_genomes_project 6 143136166 143142002 + A830011K09Rik antisense antisense MGP_LPJ_T0005134.1 MGP_LPJ_G0004380.1 mouse_genomes_project 6 143136261 143140724 + A830011K09Rik antisense antisense MGP_LPJ_T0005135.1 MGP_LPJ_G0004380.1 mouse_genomes_project 6 143136332 143142623 + A830011K09Rik antisense antisense MGP_LPJ_T0076231.1 MGP_LPJ_G0030381.1 mouse_genomes_project 6 15755458 15818973 - Cttnbp2 protein_coding retained_intron MGP_LPJ_T0076232.1 MGP_LPJ_G0030381.1 mouse_genomes_project 6 15755545 15826771 - MGP_LPJ_P0076232 Cttnbp2 protein_coding protein_coding MGP_LPJ_T0076233.1 MGP_LPJ_G0030381.1 mouse_genomes_project 6 15755687 15912375 - MGP_LPJ_P0076233 Cttnbp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0076234.1 MGP_LPJ_G0030381.1 mouse_genomes_project 6 15756200 15912447 - MGP_LPJ_P0076234 Cttnbp2 protein_coding protein_coding MGP_LPJ_T0076235.1 MGP_LPJ_G0030381.1 mouse_genomes_project 6 15782295 15800028 - MGP_LPJ_P0076235 Cttnbp2 protein_coding protein_coding MGP_LPJ_T0076236.1 MGP_LPJ_G0030381.1 mouse_genomes_project 6 15824259 15912425 - Cttnbp2 protein_coding retained_intron MGP_LPJ_T0076237.1 MGP_LPJ_G0030381.1 mouse_genomes_project 6 15827570 15910730 - MGP_LPJ_P0076237 Cttnbp2 protein_coding protein_coding MGP_LPJ_T0076238.1 MGP_LPJ_G0030381.1 mouse_genomes_project 6 15840303 15899274 - MGP_LPJ_P0076238 Cttnbp2 protein_coding protein_coding MGP_LPJ_T0076239.1 MGP_LPJ_G0030381.1 mouse_genomes_project 6 15898843 15912469 - Cttnbp2 protein_coding retained_intron MGP_LPJ_T0098651.1 MGP_LPJ_G0036921.1 mouse_genomes_project 6 85009717 85012680 + Gm43920 sense_intronic sense_intronic MGP_LPJ_T0102250.1 MGP_LPJ_G0040287.1 mouse_genomes_project 6 91264373 91265358 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002000.1 MGP_LPJ_G0001910.1 mouse_genomes_project 6 44786784 44788739 + TEC TEC MGP_LPJ_T0075966.1 MGP_LPJ_G0030333.1 mouse_genomes_project 6 1350935 1374607 + MGP_LPJ_P0075966 Casd1 protein_coding protein_coding MGP_LPJ_T0075967.1 MGP_LPJ_G0030333.1 mouse_genomes_project 6 1351155 1396244 + MGP_LPJ_P0075967 Casd1 protein_coding protein_coding MGP_LPJ_T0075968.1 MGP_LPJ_G0030333.1 mouse_genomes_project 6 1382761 1393889 + MGP_LPJ_P0075968 Casd1 protein_coding protein_coding MGP_LPJ_T0078440.1 MGP_LPJ_G0030890.1 mouse_genomes_project 6 88952167 88964313 - MGP_LPJ_P0078440 Prokr1 protein_coding protein_coding MGP_LPJ_T0078441.1 MGP_LPJ_G0030890.1 mouse_genomes_project 6 88952168 88964290 - MGP_LPJ_P0078441 Prokr1 protein_coding protein_coding MGP_LPJ_T0078442.1 MGP_LPJ_G0030890.1 mouse_genomes_project 6 88961980 88964289 - MGP_LPJ_P0078442 Prokr1 protein_coding protein_coding MGP_LPJ_T0098655.1 MGP_LPJ_G0036925.1 mouse_genomes_project 6 101369566 101373459 - Gm20705 sense_intronic sense_intronic MGP_LPJ_T0008717.1 MGP_LPJ_G0007044.1 mouse_genomes_project 6 114697640 114699452 + 1700054K19Rik lincRNA lincRNA MGP_LPJ_T0005647.1 MGP_LPJ_G0004758.1 mouse_genomes_project 6 60872967 60875225 - A730020E08Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_LPJ_T0005648.1 MGP_LPJ_G0004758.1 mouse_genomes_project 6 60874682 60880977 - A730020E08Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_LPJ_T0005649.1 MGP_LPJ_G0004758.1 mouse_genomes_project 6 60876721 60881517 - A730020E08Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_LPJ_T0077115.1 MGP_LPJ_G0030588.1 mouse_genomes_project 6 46642494 46651919 + Zfp398 protein_coding retained_intron MGP_LPJ_T0077116.1 MGP_LPJ_G0030588.1 mouse_genomes_project 6 46642497 46669890 + MGP_LPJ_P0077116 Zfp398 protein_coding protein_coding MGP_LPJ_T0077117.1 MGP_LPJ_G0030588.1 mouse_genomes_project 6 46642528 46675731 + MGP_LPJ_P0077117 Zfp398 protein_coding protein_coding MGP_LPJ_T0080823.1 MGP_LPJ_G0031402.1 mouse_genomes_project 6 152164211 152172051 + Mrps35 protein_coding retained_intron MGP_LPJ_T0080824.1 MGP_LPJ_G0031402.1 mouse_genomes_project 6 152164211 152204675 + MGP_LPJ_P0080824 Mrps35 protein_coding protein_coding MGP_LPJ_T0080825.1 MGP_LPJ_G0031402.1 mouse_genomes_project 6 152166039 152177433 + MGP_LPJ_P0080825 Mrps35 protein_coding protein_coding MGP_LPJ_T0080826.1 MGP_LPJ_G0031402.1 mouse_genomes_project 6 152181787 152196909 + Mrps35 protein_coding processed_transcript MGP_LPJ_T0080827.1 MGP_LPJ_G0031402.1 mouse_genomes_project 6 152182805 152196988 + Mrps35 protein_coding processed_transcript MGP_LPJ_T0078137.1 MGP_LPJ_G0030832.1 mouse_genomes_project 6 84561374 84593465 - Stambp protein_coding retained_intron MGP_LPJ_T0078138.1 MGP_LPJ_G0030832.1 mouse_genomes_project 6 84561380 84593471 - MGP_LPJ_P0078138 Stambp protein_coding protein_coding MGP_LPJ_T0078139.1 MGP_LPJ_G0030832.1 mouse_genomes_project 6 84561387 84595386 - MGP_LPJ_P0078139 Stambp protein_coding protein_coding MGP_LPJ_T0078140.1 MGP_LPJ_G0030832.1 mouse_genomes_project 6 84561517 84573191 - Stambp protein_coding retained_intron MGP_LPJ_T0078141.1 MGP_LPJ_G0030832.1 mouse_genomes_project 6 84561916 84593455 - MGP_LPJ_P0078141 Stambp protein_coding protein_coding MGP_LPJ_T0078142.1 MGP_LPJ_G0030832.1 mouse_genomes_project 6 84572615 84573019 - Stambp protein_coding retained_intron MGP_LPJ_T0078143.1 MGP_LPJ_G0030832.1 mouse_genomes_project 6 84592170 84593477 - Stambp protein_coding retained_intron MGP_LPJ_T0079752.1 MGP_LPJ_G0031147.1 mouse_genomes_project 6 127666845 127696491 - MGP_LPJ_P0079752 Vmn2r27 protein_coding protein_coding MGP_LPJ_T0080457.1 MGP_LPJ_G0031338.1 mouse_genomes_project 6 141541278 141588653 + MGP_LPJ_P0080457 Pde6h protein_coding protein_coding MGP_LPJ_T0080461.1 MGP_LPJ_G0031338.1 mouse_genomes_project 6 141579989 141594056 + MGP_LPJ_P0080461 Pde6h protein_coding protein_coding MGP_LPJ_T0080462.1 MGP_LPJ_G0031338.1 mouse_genomes_project 6 141579999 141588898 + Pde6h protein_coding retained_intron MGP_LPJ_T0080463.1 MGP_LPJ_G0031338.1 mouse_genomes_project 6 141584708 141588684 + MGP_LPJ_P0080463 Pde6h protein_coding protein_coding MGP_LPJ_T0078700.1 MGP_LPJ_G0030945.1 mouse_genomes_project 6 93015157 93028222 - MGP_LPJ_P0078700 Chchd4 protein_coding protein_coding MGP_LPJ_T0078701.1 MGP_LPJ_G0030945.1 mouse_genomes_project 6 93026271 93028125 - Chchd4 protein_coding retained_intron MGP_LPJ_T0010822.1 MGP_LPJ_G0008940.1 mouse_genomes_project 6 120688548 120688673 - Gm25535 miRNA miRNA MGP_LPJ_T0015204.1 MGP_LPJ_G0013295.1 mouse_genomes_project 6 10073625 10074628 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005094.1 MGP_LPJ_G0004345.1 mouse_genomes_project 6 118490849 118497141 + antisense antisense MGP_LPJ_T0077278.1 MGP_LPJ_G0030629.1 mouse_genomes_project 6 48846047 48852826 + MGP_LPJ_P0077278 Npy protein_coding protein_coding MGP_LPJ_T0005007.1 MGP_LPJ_G0004293.1 mouse_genomes_project 6 80744348 80834450 - Gm4409 antisense antisense MGP_LPJ_T0001935.1 MGP_LPJ_G0001845.1 mouse_genomes_project 6 1226782 1227507 - TEC TEC MGP_LPJ_T0015385.1 MGP_LPJ_G0013476.1 mouse_genomes_project 6 70691165 70692491 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002045.1 MGP_LPJ_G0001955.1 mouse_genomes_project 6 73740570 73742477 + TEC TEC MGP_LPJ_T0000362.1 MGP_LPJ_G0000300.1 mouse_genomes_project 6 70760956 70761258 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0015420.1 MGP_LPJ_G0013511.1 mouse_genomes_project 6 84885803 84886350 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015177.1 MGP_LPJ_G0013268.1 mouse_genomes_project 6 584298 584686 - processed_pseudogene processed_pseudogene MGP_LPJ_T0077018.1 MGP_LPJ_G0030553.1 mouse_genomes_project 6 40834939 40852037 - MGP_LPJ_P0077018 Epha1 protein_coding protein_coding MGP_LPJ_T0077019.1 MGP_LPJ_G0030553.1 mouse_genomes_project 6 40835168 40852037 - MGP_LPJ_P0077019 Epha1 protein_coding protein_coding MGP_LPJ_T0077020.1 MGP_LPJ_G0030553.1 mouse_genomes_project 6 40835220 40851979 - MGP_LPJ_P0077020 Epha1 protein_coding unknown_likely_coding MGP_LPJ_T0077021.1 MGP_LPJ_G0030553.1 mouse_genomes_project 6 40845767 40852004 - Epha1 protein_coding retained_intron MGP_LPJ_T0015439.1 MGP_LPJ_G0013530.1 mouse_genomes_project 6 91221969 91222927 + processed_pseudogene processed_pseudogene MGP_LPJ_T0077685.1 MGP_LPJ_G0030740.1 mouse_genomes_project 6 66645796 66646832 - MGP_LPJ_P0077685 Vmn1r38 protein_coding protein_coding MGP_LPJ_T0080207.1 MGP_LPJ_G0031244.1 mouse_genomes_project 6 133260028 133269964 - MGP_LPJ_P0080207 Clec12b protein_coding protein_coding MGP_LPJ_T0080208.1 MGP_LPJ_G0031244.1 mouse_genomes_project 6 133260300 133270335 - MGP_LPJ_P0080208 Clec12b protein_coding protein_coding MGP_LPJ_T0008792.1 MGP_LPJ_G0007102.1 mouse_genomes_project 6 152324252 152362041 + E330012B07Rik lincRNA lincRNA MGP_LPJ_T0008793.1 MGP_LPJ_G0007102.1 mouse_genomes_project 6 152324270 152354932 + E330012B07Rik lincRNA lincRNA MGP_LPJ_T0076118.1 MGP_LPJ_G0030364.1 mouse_genomes_project 6 10613569 10641027 - MGP_LPJ_P0076118 Tmem168 protein_coding protein_coding MGP_LPJ_T0076119.1 MGP_LPJ_G0030364.1 mouse_genomes_project 6 10615669 10635343 - MGP_LPJ_P0076119 Tmem168 protein_coding protein_coding MGP_LPJ_T0076120.1 MGP_LPJ_G0030364.1 mouse_genomes_project 6 10636274 10640675 - Tmem168 protein_coding processed_transcript MGP_LPJ_T0076121.1 MGP_LPJ_G0030364.1 mouse_genomes_project 6 10636290 10640932 - Tmem168 protein_coding processed_transcript MGP_LPJ_T0076122.1 MGP_LPJ_G0030364.1 mouse_genomes_project 6 10638827 10640971 - Tmem168 protein_coding processed_transcript MGP_LPJ_T0076123.1 MGP_LPJ_G0030364.1 mouse_genomes_project 6 10639491 10640946 - Tmem168 protein_coding processed_transcript MGP_LPJ_T0076124.1 MGP_LPJ_G0030364.1 mouse_genomes_project 6 10640214 10640954 - Tmem168 protein_coding processed_transcript MGP_LPJ_T0000050.1 MGP_LPJ_G0000041.1 mouse_genomes_project 6 71077029 71077067 + MGP_LPJ_P0000050 Igkj3 IG_J_gene IG_J_gene MGP_LPJ_T0000051.1 MGP_LPJ_G0000041.1 mouse_genomes_project 6 71077029 71077065 + Igkj3 IG_J_gene processed_transcript MGP_LPJ_T0080873.1 MGP_LPJ_G0031411.1 mouse_genomes_project 6 154078151 154079314 - Caprin2 protein_coding retained_intron MGP_LPJ_T0080874.1 MGP_LPJ_G0031411.1 mouse_genomes_project 6 154078151 154135406 - MGP_LPJ_P0080874 Caprin2 protein_coding protein_coding MGP_LPJ_T0080875.1 MGP_LPJ_G0031411.1 mouse_genomes_project 6 154078152 154087011 - MGP_LPJ_P0080875 Caprin2 protein_coding protein_coding MGP_LPJ_T0080876.1 MGP_LPJ_G0031411.1 mouse_genomes_project 6 154078152 154135319 - MGP_LPJ_P0080876 Caprin2 protein_coding protein_coding MGP_LPJ_T0080877.1 MGP_LPJ_G0031411.1 mouse_genomes_project 6 154079696 154084799 - Caprin2 protein_coding retained_intron MGP_LPJ_T0080878.1 MGP_LPJ_G0031411.1 mouse_genomes_project 6 154080224 154086982 - Caprin2 protein_coding processed_transcript MGP_LPJ_T0080879.1 MGP_LPJ_G0031411.1 mouse_genomes_project 6 154083224 154098498 - Caprin2 protein_coding processed_transcript MGP_LPJ_T0080880.1 MGP_LPJ_G0031411.1 mouse_genomes_project 6 154115610 154134628 - MGP_LPJ_P0080880 Caprin2 protein_coding protein_coding MGP_LPJ_T0080881.1 MGP_LPJ_G0031411.1 mouse_genomes_project 6 154122239 154128521 - Caprin2 protein_coding retained_intron MGP_LPJ_T0080882.1 MGP_LPJ_G0031411.1 mouse_genomes_project 6 154125373 154135331 - Caprin2 protein_coding processed_transcript MGP_LPJ_T0080883.1 MGP_LPJ_G0031411.1 mouse_genomes_project 6 154133338 154134778 - Caprin2 protein_coding processed_transcript MGP_LPJ_T0004972.1 MGP_LPJ_G0004268.1 mouse_genomes_project 6 47950007 47963008 - 4930563H07Rik antisense antisense MGP_LPJ_T0078816.1 MGP_LPJ_G0030970.1 mouse_genomes_project 6 98668666 98901010 - MGP_LPJ_P0078816 Fam19a4 protein_coding protein_coding MGP_LPJ_T0078817.1 MGP_LPJ_G0030970.1 mouse_genomes_project 6 98897224 98900990 - Fam19a4 protein_coding retained_intron MGP_LPJ_T0079548.1 MGP_LPJ_G0031097.1 mouse_genomes_project 6 122953913 123066205 + MGP_LPJ_P0079548 Ninj2 protein_coding protein_coding MGP_LPJ_T0079549.1 MGP_LPJ_G0031097.1 mouse_genomes_project 6 123059681 123066200 + MGP_LPJ_P0079549 Ninj2 protein_coding protein_coding MGP_LPJ_T0077511.1 MGP_LPJ_G0030682.1 mouse_genomes_project 6 56081146 56085343 - MGP_LPJ_P0077511 Lsm5 protein_coding protein_coding MGP_LPJ_T0077512.1 MGP_LPJ_G0030682.1 mouse_genomes_project 6 56081148 56085310 - Lsm5 protein_coding retained_intron MGP_LPJ_T0077513.1 MGP_LPJ_G0030682.1 mouse_genomes_project 6 56081208 56085289 - MGP_LPJ_P0077513 Lsm5 protein_coding nonsense_mediated_decay MGP_LPJ_T0077514.1 MGP_LPJ_G0030682.1 mouse_genomes_project 6 56081342 56085301 - MGP_LPJ_P0077514 Lsm5 protein_coding protein_coding MGP_LPJ_T0002756.1 MGP_LPJ_G0002628.1 mouse_genomes_project 6 39573997 39574287 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0008593.1 MGP_LPJ_G0006947.1 mouse_genomes_project 6 46948053 46951035 - lincRNA lincRNA MGP_LPJ_T0002157.1 MGP_LPJ_G0002067.1 mouse_genomes_project 6 119857941 119858786 + TEC TEC MGP_LPJ_T0098380.1 MGP_LPJ_G0036661.1 mouse_genomes_project 6 69400426 69400753 - Rprl1 ribozyme ribozyme MGP_LPJ_T0080201.1 MGP_LPJ_G0031242.1 mouse_genomes_project 6 133197055 133206830 - MGP_LPJ_P0080201 4922502D21Rik protein_coding protein_coding MGP_LPJ_T0080202.1 MGP_LPJ_G0031242.1 mouse_genomes_project 6 133197738 133201588 - MGP_LPJ_P0080202 4922502D21Rik protein_coding protein_coding MGP_LPJ_T0001960.1 MGP_LPJ_G0001870.1 mouse_genomes_project 6 20925060 20927321 + TEC TEC MGP_LPJ_T0102222.1 MGP_LPJ_G0040259.1 mouse_genomes_project 6 41647287 41647603 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008510.1 MGP_LPJ_G0006894.1 mouse_genomes_project 6 3311280 3353823 - lincRNA lincRNA MGP_LPJ_T0008511.1 MGP_LPJ_G0006894.1 mouse_genomes_project 6 3311684 3353989 - lincRNA lincRNA MGP_LPJ_T0076923.1 MGP_LPJ_G0030519.1 mouse_genomes_project 6 39041137 39056360 - MGP_LPJ_P0076923 Clec5a protein_coding protein_coding MGP_LPJ_T0076924.1 MGP_LPJ_G0030519.1 mouse_genomes_project 6 39042960 39056378 - Clec5a protein_coding processed_transcript MGP_LPJ_T0076925.1 MGP_LPJ_G0030519.1 mouse_genomes_project 6 39044093 39056352 - MGP_LPJ_P0076925 Clec5a protein_coding protein_coding MGP_LPJ_T0076926.1 MGP_LPJ_G0030519.1 mouse_genomes_project 6 39044203 39056347 - MGP_LPJ_P0076926 Clec5a protein_coding protein_coding MGP_LPJ_T0077030.1 MGP_LPJ_G0030561.1 mouse_genomes_project 6 41089256 41091964 - Tcaf3 protein_coding processed_transcript MGP_LPJ_T0077031.1 MGP_LPJ_G0030561.1 mouse_genomes_project 6 41091547 41102124 - MGP_LPJ_P0077031 Tcaf3 protein_coding protein_coding MGP_LPJ_T0077032.1 MGP_LPJ_G0030561.1 mouse_genomes_project 6 41098901 41102444 - MGP_LPJ_P0077032 Tcaf3 protein_coding protein_coding MGP_LPJ_T0015550.1 MGP_LPJ_G0013641.1 mouse_genomes_project 6 128760429 128760727 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004997.1 MGP_LPJ_G0004286.1 mouse_genomes_project 6 71952352 71953275 - 1700040L08Rik antisense antisense MGP_LPJ_T0005153.1 MGP_LPJ_G0004397.1 mouse_genomes_project 6 152608004 152647947 - Gm6288 antisense antisense MGP_LPJ_T0005154.1 MGP_LPJ_G0004397.1 mouse_genomes_project 6 152647265 152648178 - Gm6288 antisense antisense MGP_LPJ_T0100911.1 MGP_LPJ_G0039174.1 mouse_genomes_project 6 95581937 95582073 + Gm22840 snoRNA snoRNA MGP_LPJ_T0004967.1 MGP_LPJ_G0004264.1 mouse_genomes_project 6 40849404 40859318 + 2010310C07Rik antisense antisense MGP_LPJ_T0004968.1 MGP_LPJ_G0004264.1 mouse_genomes_project 6 40856718 40859978 + 2010310C07Rik antisense antisense MGP_LPJ_T0004936.1 MGP_LPJ_G0004237.1 mouse_genomes_project 6 15655962 15677251 - Gm15592 antisense antisense MGP_LPJ_T0011850.1 MGP_LPJ_G0009944.1 mouse_genomes_project 6 41306078 41307014 + MGP_LPJ_P0011850 Olfr451-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_LPJ_T0100926.1 MGP_LPJ_G0039189.1 mouse_genomes_project 6 127234792 127234909 - Gm23079 snoRNA snoRNA MGP_LPJ_T0077345.1 MGP_LPJ_G0030642.1 mouse_genomes_project 6 51382601 51385016 - MGP_LPJ_P0077345 Hoxa2 protein_coding protein_coding MGP_LPJ_T0079490.1 MGP_LPJ_G0031092.1 mouse_genomes_project 6 122243667 122366174 - MGP_LPJ_P0079490 Wnt5b protein_coding protein_coding MGP_LPJ_T0079491.1 MGP_LPJ_G0031092.1 mouse_genomes_project 6 122244531 122259764 - MGP_LPJ_P0079491 Wnt5b protein_coding protein_coding MGP_LPJ_T0011653.1 MGP_LPJ_G0009771.1 mouse_genomes_project 6 46593398 46593510 - Rny1 misc_RNA misc_RNA MGP_LPJ_T0008761.1 MGP_LPJ_G0007081.1 mouse_genomes_project 6 138994004 138996452 - Gm43949 lincRNA lincRNA MGP_LPJ_T0076316.1 MGP_LPJ_G0030400.1 mouse_genomes_project 6 22253366 22295880 + MGP_LPJ_P0076316 Asb15 protein_coding protein_coding MGP_LPJ_T0076317.1 MGP_LPJ_G0030400.1 mouse_genomes_project 6 22280938 22298060 + MGP_LPJ_P0076317 Asb15 protein_coding protein_coding MGP_LPJ_T0008732.1 MGP_LPJ_G0007057.1 mouse_genomes_project 6 121024137 121025895 - 1700069P05Rik lincRNA lincRNA MGP_LPJ_T0076965.1 MGP_LPJ_G0030539.1 mouse_genomes_project 6 40291963 40295463 - MGP_LPJ_P0076965 Olfr459 protein_coding protein_coding MGP_LPJ_T0076966.1 MGP_LPJ_G0030539.1 mouse_genomes_project 6 40291963 40293072 - MGP_LPJ_P0076966 Olfr459 protein_coding protein_coding MGP_LPJ_T0080156.1 MGP_LPJ_G0031226.1 mouse_genomes_project 6 132158774 132167745 - Fkbp4 protein_coding retained_intron MGP_LPJ_T0080157.1 MGP_LPJ_G0031226.1 mouse_genomes_project 6 132159125 132167745 - MGP_LPJ_P0080157 Fkbp4 protein_coding protein_coding MGP_LPJ_T0080158.1 MGP_LPJ_G0031226.1 mouse_genomes_project 6 132162282 132167208 - MGP_LPJ_P0080158 Fkbp4 protein_coding protein_coding MGP_LPJ_T0080159.1 MGP_LPJ_G0031226.1 mouse_genomes_project 6 132162829 132166721 - MGP_LPJ_P0080159 Fkbp4 protein_coding protein_coding MGP_LPJ_T0078660.1 MGP_LPJ_G0030939.1 mouse_genomes_project 6 92119496 92162493 + MGP_LPJ_P0078660 Slc41a3 protein_coding protein_coding MGP_LPJ_T0078661.1 MGP_LPJ_G0030939.1 mouse_genomes_project 6 92133918 92162493 + MGP_LPJ_P0078661 Slc41a3 protein_coding protein_coding MGP_LPJ_T0099681.1 MGP_LPJ_G0037944.1 mouse_genomes_project 6 133019880 133019943 + Gm26160 snRNA snRNA MGP_LPJ_T0015228.1 MGP_LPJ_G0013319.1 mouse_genomes_project 6 20378186 20380954 + processed_pseudogene processed_pseudogene MGP_LPJ_T0078747.1 MGP_LPJ_G0030954.1 mouse_genomes_project 6 93676312 93756653 + MGP_LPJ_P0078747 Nr2c2 protein_coding protein_coding MGP_LPJ_T0078748.1 MGP_LPJ_G0030954.1 mouse_genomes_project 6 93677355 93751157 + MGP_LPJ_P0078748 Nr2c2 protein_coding protein_coding MGP_LPJ_T0078749.1 MGP_LPJ_G0030954.1 mouse_genomes_project 6 93721719 93723537 + MGP_LPJ_P0078749 Nr2c2 protein_coding protein_coding MGP_LPJ_T0078750.1 MGP_LPJ_G0030954.1 mouse_genomes_project 6 93722320 93725931 + Nr2c2 protein_coding retained_intron MGP_LPJ_T0078751.1 MGP_LPJ_G0030954.1 mouse_genomes_project 6 93723500 93752120 + MGP_LPJ_P0078751 Nr2c2 protein_coding nonsense_mediated_decay MGP_LPJ_T0078752.1 MGP_LPJ_G0030954.1 mouse_genomes_project 6 93729190 93740075 + Nr2c2 protein_coding processed_transcript MGP_LPJ_T0078753.1 MGP_LPJ_G0030954.1 mouse_genomes_project 6 93740428 93742275 + Nr2c2 protein_coding retained_intron MGP_LPJ_T0078754.1 MGP_LPJ_G0030954.1 mouse_genomes_project 6 93747632 93758141 + Nr2c2 protein_coding processed_transcript MGP_LPJ_T0015507.1 MGP_LPJ_G0013598.1 mouse_genomes_project 6 117383127 117383515 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008607.1 MGP_LPJ_G0006958.1 mouse_genomes_project 6 50527394 50542938 - Gm26677 lincRNA lincRNA MGP_LPJ_T0077988.1 MGP_LPJ_G0030805.1 mouse_genomes_project 6 83895278 83924454 - MGP_LPJ_P0077988 Sema4f protein_coding protein_coding MGP_LPJ_T0077989.1 MGP_LPJ_G0030805.1 mouse_genomes_project 6 83897481 83900984 - Sema4f protein_coding processed_transcript MGP_LPJ_T0077990.1 MGP_LPJ_G0030805.1 mouse_genomes_project 6 83899619 83924454 - Sema4f protein_coding retained_intron MGP_LPJ_T0077991.1 MGP_LPJ_G0030805.1 mouse_genomes_project 6 83901998 83924230 - MGP_LPJ_P0077991 Sema4f protein_coding nonsense_mediated_decay MGP_LPJ_T0079758.1 MGP_LPJ_G0031150.1 mouse_genomes_project 6 127859235 127879234 - MGP_LPJ_P0079758 Pex5 protein_coding protein_coding MGP_LPJ_T0079759.1 MGP_LPJ_G0031150.1 mouse_genomes_project 6 127859236 127878600 - MGP_LPJ_P0079759 Pex5 protein_coding protein_coding MGP_LPJ_T0079760.1 MGP_LPJ_G0031150.1 mouse_genomes_project 6 127859236 127879234 - MGP_LPJ_P0079760 Pex5 protein_coding protein_coding MGP_LPJ_T0079761.1 MGP_LPJ_G0031150.1 mouse_genomes_project 6 127859236 127879030 - MGP_LPJ_P0079761 Pex5 protein_coding protein_coding MGP_LPJ_T0079762.1 MGP_LPJ_G0031150.1 mouse_genomes_project 6 127859251 127879204 - MGP_LPJ_P0079762 Pex5 protein_coding protein_coding MGP_LPJ_T0079763.1 MGP_LPJ_G0031150.1 mouse_genomes_project 6 127860330 127863781 - Pex5 protein_coding retained_intron MGP_LPJ_T0079764.1 MGP_LPJ_G0031150.1 mouse_genomes_project 6 127867296 127878209 - Pex5 protein_coding processed_transcript MGP_LPJ_T0079765.1 MGP_LPJ_G0031150.1 mouse_genomes_project 6 127868479 127869534 - Pex5 protein_coding retained_intron MGP_LPJ_T0002191.1 MGP_LPJ_G0002100.1 mouse_genomes_project 6 141795037 141796091 - TEC TEC MGP_LPJ_T0010810.1 MGP_LPJ_G0008928.1 mouse_genomes_project 6 101043576 101043723 - miRNA miRNA MGP_LPJ_T0079198.1 MGP_LPJ_G0031040.1 mouse_genomes_project 6 116996069 117082628 + MGP_LPJ_P0079198 Hrh1 protein_coding protein_coding MGP_LPJ_T0079199.1 MGP_LPJ_G0031040.1 mouse_genomes_project 6 116996219 117079196 + MGP_LPJ_P0079199 Hrh1 protein_coding protein_coding MGP_LPJ_T0079200.1 MGP_LPJ_G0031040.1 mouse_genomes_project 6 117001798 117081800 + MGP_LPJ_P0079200 Hrh1 protein_coding protein_coding MGP_LPJ_T0079201.1 MGP_LPJ_G0031040.1 mouse_genomes_project 6 117001954 117081734 + MGP_LPJ_P0079201 Hrh1 protein_coding protein_coding MGP_LPJ_T0079202.1 MGP_LPJ_G0031040.1 mouse_genomes_project 6 117056671 117081798 + MGP_LPJ_P0079202 Hrh1 protein_coding protein_coding MGP_LPJ_T0077287.1 MGP_LPJ_G0030631.1 mouse_genomes_project 6 49241479 49246098 - Dfna5 protein_coding retained_intron MGP_LPJ_T0077288.1 MGP_LPJ_G0030631.1 mouse_genomes_project 6 49241956 49316568 - MGP_LPJ_P0077288 Dfna5 protein_coding protein_coding MGP_LPJ_T0077290.1 MGP_LPJ_G0030631.1 mouse_genomes_project 6 49253436 49316560 - MGP_LPJ_P0077290 Dfna5 protein_coding protein_coding MGP_LPJ_T0077291.1 MGP_LPJ_G0030631.1 mouse_genomes_project 6 49261679 49318675 - MGP_LPJ_P0077291 Dfna5 protein_coding protein_coding MGP_LPJ_T0077292.1 MGP_LPJ_G0030631.1 mouse_genomes_project 6 49261681 49316582 - MGP_LPJ_P0077292 Dfna5 protein_coding protein_coding MGP_LPJ_T0077293.1 MGP_LPJ_G0030631.1 mouse_genomes_project 6 49300928 49316839 - MGP_LPJ_P0077293 Dfna5 protein_coding protein_coding MGP_LPJ_T0077294.1 MGP_LPJ_G0030631.1 mouse_genomes_project 6 49314193 49316788 - Dfna5 protein_coding retained_intron MGP_LPJ_T0080610.1 MGP_LPJ_G0031366.1 mouse_genomes_project 6 147271629 147290226 + MGP_LPJ_P0080610 Pyroxd1 protein_coding protein_coding MGP_LPJ_T0080611.1 MGP_LPJ_G0031366.1 mouse_genomes_project 6 147271642 147273830 + Pyroxd1 protein_coding retained_intron MGP_LPJ_T0080612.1 MGP_LPJ_G0031366.1 mouse_genomes_project 6 147271653 147289020 + Pyroxd1 protein_coding retained_intron MGP_LPJ_T0080613.1 MGP_LPJ_G0031366.1 mouse_genomes_project 6 147272891 147284491 + Pyroxd1 protein_coding processed_transcript MGP_LPJ_T0080615.1 MGP_LPJ_G0031366.1 mouse_genomes_project 6 147279927 147281668 + Pyroxd1 protein_coding retained_intron MGP_LPJ_T0002703.1 MGP_LPJ_G0002583.1 mouse_genomes_project 6 39535445 39536101 + MGP_LPJ_P0002703 Trbv2 TR_V_gene TR_V_gene MGP_LPJ_T0015222.1 MGP_LPJ_G0013313.1 mouse_genomes_project 6 17267690 17268652 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002130.1 MGP_LPJ_G0002040.1 mouse_genomes_project 6 103029943 103030550 - TEC TEC MGP_LPJ_T0080229.1 MGP_LPJ_G0031250.1 mouse_genomes_project 6 133421675 133430564 + MGP_LPJ_P0080229 Gabarapl1 protein_coding protein_coding MGP_LPJ_T0005657.1 MGP_LPJ_G0004763.1 mouse_genomes_project 6 118867574 118876164 - 9530062K07Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_LPJ_T0077626.1 MGP_LPJ_G0030727.1 mouse_genomes_project 6 60881030 62136570 + MGP_LPJ_P0077626 Ccser1 protein_coding protein_coding MGP_LPJ_T0077627.1 MGP_LPJ_G0030727.1 mouse_genomes_project 6 60881243 61016692 + Ccser1 protein_coding retained_intron MGP_LPJ_T0077628.1 MGP_LPJ_G0030727.1 mouse_genomes_project 6 60881244 61016323 + Ccser1 protein_coding retained_intron MGP_LPJ_T0077629.1 MGP_LPJ_G0030727.1 mouse_genomes_project 6 61014569 62133975 + MGP_LPJ_P0077629 Ccser1 protein_coding protein_coding MGP_LPJ_T0077630.1 MGP_LPJ_G0030727.1 mouse_genomes_project 6 61017515 61287974 + Ccser1 protein_coding retained_intron MGP_LPJ_T0077631.1 MGP_LPJ_G0030727.1 mouse_genomes_project 6 61022785 61287736 + Ccser1 protein_coding processed_transcript MGP_LPJ_T0077632.1 MGP_LPJ_G0030727.1 mouse_genomes_project 6 61111518 61555379 + MGP_LPJ_P0077632 Ccser1 protein_coding protein_coding MGP_LPJ_T0077633.1 MGP_LPJ_G0030727.1 mouse_genomes_project 6 61111526 61464349 + Ccser1 protein_coding retained_intron MGP_LPJ_T0077634.1 MGP_LPJ_G0030727.1 mouse_genomes_project 6 61111561 61198649 + Ccser1 protein_coding processed_transcript MGP_LPJ_T0077635.1 MGP_LPJ_G0030727.1 mouse_genomes_project 6 61287637 61564186 + MGP_LPJ_P0077635 Ccser1 protein_coding protein_coding MGP_LPJ_T0077636.1 MGP_LPJ_G0030727.1 mouse_genomes_project 6 61528801 61563725 + Ccser1 protein_coding processed_transcript MGP_LPJ_T0001995.1 MGP_LPJ_G0001905.1 mouse_genomes_project 6 44029150 44031414 + TEC TEC MGP_LPJ_T0015627.1 MGP_LPJ_G0013718.1 mouse_genomes_project 6 153444886 153445289 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100905.1 MGP_LPJ_G0039168.1 mouse_genomes_project 6 82732318 82732436 + Gm22530 snoRNA snoRNA MGP_LPJ_T0000189.1 MGP_LPJ_G0000140.1 mouse_genomes_project 6 68903143 68903605 - MGP_LPJ_P0000189 Igkv12-89 IG_V_gene IG_V_gene MGP_LPJ_T0000190.1 MGP_LPJ_G0000140.1 mouse_genomes_project 6 68903143 68903605 - MGP_LPJ_P0000190 Igkv12-89 IG_V_gene IG_V_gene MGP_LPJ_T0099678.1 MGP_LPJ_G0037941.1 mouse_genomes_project 6 128219850 128219912 - Rnu7 snRNA snRNA MGP_LPJ_T0080048.1 MGP_LPJ_G0031202.1 mouse_genomes_project 6 130206850 130211249 - MGP_LPJ_P0080048 Kcna1 protein_coding protein_coding MGP_LPJ_T0080049.1 MGP_LPJ_G0031202.1 mouse_genomes_project 6 130208117 130211266 - MGP_LPJ_P0080049 Kcna1 protein_coding protein_coding MGP_LPJ_T0080050.1 MGP_LPJ_G0031202.1 mouse_genomes_project 6 130210227 130212836 - Kcna1 protein_coding processed_transcript MGP_LPJ_T0002067.1 MGP_LPJ_G0001977.1 mouse_genomes_project 6 84073353 84074873 - TEC TEC MGP_LPJ_T0077581.1 MGP_LPJ_G0030716.1 mouse_genomes_project 6 57782330 57783415 + MGP_LPJ_P0077581 Vmn1r28 protein_coding protein_coding MGP_LPJ_T0078047.1 MGP_LPJ_G0030816.1 mouse_genomes_project 6 84101447 84109462 + MGP_LPJ_P0078047 protein_coding nonsense_mediated_decay MGP_LPJ_T0002204.1 MGP_LPJ_G0002113.1 mouse_genomes_project 6 150399096 150400012 + TEC TEC MGP_LPJ_T0076445.1 MGP_LPJ_G0030430.1 mouse_genomes_project 6 27400482 27402511 + MGP_LPJ_P0076445 Gm9047 protein_coding protein_coding MGP_LPJ_T0005043.1 MGP_LPJ_G0004311.1 mouse_genomes_project 6 89035123 89041994 + Gm44097 antisense antisense MGP_LPJ_T0077955.1 MGP_LPJ_G0030798.1 mouse_genomes_project 6 80827637 81680090 + MGP_LPJ_P0077955 Lrrtm4 protein_coding protein_coding MGP_LPJ_T0077956.1 MGP_LPJ_G0030798.1 mouse_genomes_project 6 80827648 80833050 + MGP_LPJ_P0077956 Lrrtm4 protein_coding protein_coding MGP_LPJ_T0077957.1 MGP_LPJ_G0030798.1 mouse_genomes_project 6 80827678 80836318 + MGP_LPJ_P0077957 Lrrtm4 protein_coding protein_coding MGP_LPJ_T0077958.1 MGP_LPJ_G0030798.1 mouse_genomes_project 6 80827678 81679270 + MGP_LPJ_P0077958 Lrrtm4 protein_coding protein_coding MGP_LPJ_T0077959.1 MGP_LPJ_G0030798.1 mouse_genomes_project 6 80827771 81680088 + MGP_LPJ_P0077959 Lrrtm4 protein_coding protein_coding MGP_LPJ_T0077960.1 MGP_LPJ_G0030798.1 mouse_genomes_project 6 80827808 80837304 + MGP_LPJ_P0077960 Lrrtm4 protein_coding protein_coding MGP_LPJ_T0077961.1 MGP_LPJ_G0030798.1 mouse_genomes_project 6 80828085 80833217 + MGP_LPJ_P0077961 Lrrtm4 protein_coding protein_coding MGP_LPJ_T0077962.1 MGP_LPJ_G0030798.1 mouse_genomes_project 6 80831075 80836326 + MGP_LPJ_P0077962 Lrrtm4 protein_coding protein_coding MGP_LPJ_T0002142.1 MGP_LPJ_G0002052.1 mouse_genomes_project 6 110803418 110805642 - TEC TEC MGP_LPJ_T0078688.1 MGP_LPJ_G0030943.1 mouse_genomes_project 6 92758706 92819034 + MGP_LPJ_P0078688 Fbln2 protein_coding protein_coding MGP_LPJ_T0078689.1 MGP_LPJ_G0030943.1 mouse_genomes_project 6 92758706 92819035 + MGP_LPJ_P0078689 Fbln2 protein_coding protein_coding MGP_LPJ_T0078690.1 MGP_LPJ_G0030943.1 mouse_genomes_project 6 92759073 92779739 + MGP_LPJ_P0078690 Fbln2 protein_coding protein_coding MGP_LPJ_T0078691.1 MGP_LPJ_G0030943.1 mouse_genomes_project 6 92759075 92779918 + MGP_LPJ_P0078691 Fbln2 protein_coding protein_coding MGP_LPJ_T0078692.1 MGP_LPJ_G0030943.1 mouse_genomes_project 6 92759078 92760492 + Fbln2 protein_coding processed_transcript MGP_LPJ_T0078693.1 MGP_LPJ_G0030943.1 mouse_genomes_project 6 92759082 92779938 + MGP_LPJ_P0078693 Fbln2 protein_coding protein_coding MGP_LPJ_T0078694.1 MGP_LPJ_G0030943.1 mouse_genomes_project 6 92802561 92804336 + Fbln2 protein_coding retained_intron MGP_LPJ_T0078695.1 MGP_LPJ_G0030943.1 mouse_genomes_project 6 92802964 92809925 + Fbln2 protein_coding retained_intron MGP_LPJ_T0078696.1 MGP_LPJ_G0030943.1 mouse_genomes_project 6 92812374 92818923 + Fbln2 protein_coding retained_intron MGP_LPJ_T0018230.1 MGP_LPJ_G0015554.1 mouse_genomes_project 6 66784024 66784829 - 4930597O21Rik processed_transcript retained_intron MGP_LPJ_T0018231.1 MGP_LPJ_G0015554.1 mouse_genomes_project 6 66784026 66786716 - 4930597O21Rik processed_transcript bidirectional_promoter_lncRNA MGP_LPJ_T0015375.1 MGP_LPJ_G0013466.1 mouse_genomes_project 6 68196075 68196772 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015523.1 MGP_LPJ_G0013614.1 mouse_genomes_project 6 123819785 123825196 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015425.1 MGP_LPJ_G0013516.1 mouse_genomes_project 6 86197393 86197937 + processed_pseudogene processed_pseudogene MGP_LPJ_T0077295.1 MGP_LPJ_G0030632.1 mouse_genomes_project 6 49341912 49436501 - MGP_LPJ_P0077295 Osbpl3 protein_coding protein_coding MGP_LPJ_T0077296.1 MGP_LPJ_G0030632.1 mouse_genomes_project 6 49343762 49348917 - Osbpl3 protein_coding retained_intron MGP_LPJ_T0077297.1 MGP_LPJ_G0030632.1 mouse_genomes_project 6 49344268 49422136 - MGP_LPJ_P0077297 Osbpl3 protein_coding protein_coding MGP_LPJ_T0077298.1 MGP_LPJ_G0030632.1 mouse_genomes_project 6 49345385 49524464 - MGP_LPJ_P0077298 Osbpl3 protein_coding protein_coding MGP_LPJ_T0077299.1 MGP_LPJ_G0030632.1 mouse_genomes_project 6 49345391 49422239 - MGP_LPJ_P0077299 Osbpl3 protein_coding protein_coding MGP_LPJ_T0077300.1 MGP_LPJ_G0030632.1 mouse_genomes_project 6 49348776 49436501 - Osbpl3 protein_coding retained_intron MGP_LPJ_T0077301.1 MGP_LPJ_G0030632.1 mouse_genomes_project 6 49376957 49402981 - MGP_LPJ_P0077301 Osbpl3 protein_coding protein_coding MGP_LPJ_T0077302.1 MGP_LPJ_G0030632.1 mouse_genomes_project 6 49399118 49524455 - MGP_LPJ_P0077302 Osbpl3 protein_coding protein_coding MGP_LPJ_T0077303.1 MGP_LPJ_G0030632.1 mouse_genomes_project 6 49403843 49457577 - MGP_LPJ_P0077303 Osbpl3 protein_coding protein_coding MGP_LPJ_T0077304.1 MGP_LPJ_G0030632.1 mouse_genomes_project 6 49471816 49524495 - Osbpl3 protein_coding processed_transcript MGP_LPJ_T0015579.1 MGP_LPJ_G0013670.1 mouse_genomes_project 6 134653374 134917923 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008752.1 MGP_LPJ_G0007077.1 mouse_genomes_project 6 132692341 132695316 + Gm26656 lincRNA lincRNA MGP_LPJ_T0102254.1 MGP_LPJ_G0040291.1 mouse_genomes_project 6 91732582 91733525 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002054.1 MGP_LPJ_G0001964.1 mouse_genomes_project 6 78419447 78422242 - TEC TEC MGP_LPJ_T0008720.1 MGP_LPJ_G0007047.1 mouse_genomes_project 6 116195936 116197432 - 1700015O11Rik lincRNA lincRNA MGP_LPJ_T0015379.1 MGP_LPJ_G0013470.1 mouse_genomes_project 6 68976470 68976922 + processed_pseudogene processed_pseudogene MGP_LPJ_T0080614.1 MGP_LPJ_G0031367.1 mouse_genomes_project 6 147276301 147315535 - MGP_LPJ_P0080614 Recql protein_coding protein_coding MGP_LPJ_T0080616.1 MGP_LPJ_G0031367.1 mouse_genomes_project 6 147283916 147315573 - MGP_LPJ_P0080616 Recql protein_coding protein_coding MGP_LPJ_T0080617.1 MGP_LPJ_G0031367.1 mouse_genomes_project 6 147283920 147294836 - MGP_LPJ_P0080617 Recql protein_coding protein_coding MGP_LPJ_T0080618.1 MGP_LPJ_G0031367.1 mouse_genomes_project 6 147284830 147290631 - Recql protein_coding processed_transcript MGP_LPJ_T0080619.1 MGP_LPJ_G0031367.1 mouse_genomes_project 6 147288344 147315586 - MGP_LPJ_P0080619 Recql protein_coding protein_coding MGP_LPJ_T0080620.1 MGP_LPJ_G0031367.1 mouse_genomes_project 6 147289089 147290543 - MGP_LPJ_P0080620 Recql protein_coding protein_coding MGP_LPJ_T0080621.1 MGP_LPJ_G0031367.1 mouse_genomes_project 6 147292667 147296611 - Recql protein_coding processed_transcript MGP_LPJ_T0080622.1 MGP_LPJ_G0031367.1 mouse_genomes_project 6 147295365 147295777 - Recql protein_coding retained_intron MGP_LPJ_T0080623.1 MGP_LPJ_G0031367.1 mouse_genomes_project 6 147302846 147315508 - MGP_LPJ_P0080623 Recql protein_coding protein_coding MGP_LPJ_T0080624.1 MGP_LPJ_G0031367.1 mouse_genomes_project 6 147302846 147315473 - MGP_LPJ_P0080624 Recql protein_coding protein_coding MGP_LPJ_T0080625.1 MGP_LPJ_G0031367.1 mouse_genomes_project 6 147304928 147315581 - MGP_LPJ_P0080625 Recql protein_coding protein_coding MGP_LPJ_T0077546.1 MGP_LPJ_G0030696.1 mouse_genomes_project 6 56693511 56695042 + MGP_LPJ_P0077546 Vmn1r14 protein_coding protein_coding MGP_LPJ_T0001956.1 MGP_LPJ_G0001866.1 mouse_genomes_project 6 15500292 15502106 - TEC TEC MGP_LPJ_T0102210.1 MGP_LPJ_G0040247.1 mouse_genomes_project 6 32588953 32592326 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0000327.1 MGP_LPJ_G0000265.1 mouse_genomes_project 6 68333309 68334070 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0099666.1 MGP_LPJ_G0037929.1 mouse_genomes_project 6 99611842 99611949 + Gm24565 snRNA snRNA MGP_LPJ_T0099646.1 MGP_LPJ_G0037909.1 mouse_genomes_project 6 40813550 40813657 - Gm24611 snRNA snRNA MGP_LPJ_T0080701.1 MGP_LPJ_G0031381.1 mouse_genomes_project 6 150191349 150256296 + MGP_LPJ_P0080701 Lrmp protein_coding nonsense_mediated_decay MGP_LPJ_T0080702.1 MGP_LPJ_G0031381.1 mouse_genomes_project 6 150197470 150256302 + MGP_LPJ_P0080702 Lrmp protein_coding protein_coding MGP_LPJ_T0080703.1 MGP_LPJ_G0031381.1 mouse_genomes_project 6 150197473 150248908 + Lrmp protein_coding retained_intron MGP_LPJ_T0080704.1 MGP_LPJ_G0031381.1 mouse_genomes_project 6 150197509 150239324 + Lrmp protein_coding retained_intron MGP_LPJ_T0080705.1 MGP_LPJ_G0031381.1 mouse_genomes_project 6 150213529 150238761 + MGP_LPJ_P0080705 Lrmp protein_coding protein_coding MGP_LPJ_T0080706.1 MGP_LPJ_G0031381.1 mouse_genomes_project 6 150221473 150234709 + Lrmp protein_coding retained_intron MGP_LPJ_T0080707.1 MGP_LPJ_G0031381.1 mouse_genomes_project 6 150221473 150239337 + MGP_LPJ_P0080707 Lrmp protein_coding protein_coding MGP_LPJ_T0080708.1 MGP_LPJ_G0031381.1 mouse_genomes_project 6 150221476 150256296 + MGP_LPJ_P0080708 Lrmp protein_coding protein_coding MGP_LPJ_T0080709.1 MGP_LPJ_G0031381.1 mouse_genomes_project 6 150233799 150251695 + Lrmp protein_coding processed_transcript MGP_LPJ_T0080710.1 MGP_LPJ_G0031381.1 mouse_genomes_project 6 150249501 150256046 + Lrmp protein_coding retained_intron MGP_LPJ_T0077279.1 MGP_LPJ_G0030630.1 mouse_genomes_project 6 49160473 49251027 + MGP_LPJ_P0077279 Mpp6 protein_coding protein_coding MGP_LPJ_T0077280.1 MGP_LPJ_G0030630.1 mouse_genomes_project 6 49160481 49251016 + MGP_LPJ_P0077280 Mpp6 protein_coding protein_coding MGP_LPJ_T0077281.1 MGP_LPJ_G0030630.1 mouse_genomes_project 6 49160510 49251368 + MGP_LPJ_P0077281 Mpp6 protein_coding protein_coding MGP_LPJ_T0077282.1 MGP_LPJ_G0030630.1 mouse_genomes_project 6 49160512 49164036 + Mpp6 protein_coding retained_intron MGP_LPJ_T0077283.1 MGP_LPJ_G0030630.1 mouse_genomes_project 6 49160615 49250853 + MGP_LPJ_P0077283 Mpp6 protein_coding protein_coding MGP_LPJ_T0077284.1 MGP_LPJ_G0030630.1 mouse_genomes_project 6 49160639 49215500 + MGP_LPJ_P0077284 Mpp6 protein_coding nonsense_mediated_decay MGP_LPJ_T0077285.1 MGP_LPJ_G0030630.1 mouse_genomes_project 6 49161092 49233208 + MGP_LPJ_P0077285 Mpp6 protein_coding protein_coding MGP_LPJ_T0077286.1 MGP_LPJ_G0030630.1 mouse_genomes_project 6 49232894 49249142 + Mpp6 protein_coding processed_transcript MGP_LPJ_T0077289.1 MGP_LPJ_G0030630.1 mouse_genomes_project 6 49246998 49250756 + Mpp6 protein_coding retained_intron MGP_LPJ_T0015576.1 MGP_LPJ_G0013667.1 mouse_genomes_project 6 134603491 134604470 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099638.1 MGP_LPJ_G0037901.1 mouse_genomes_project 6 27015728 27015894 - Gm25589 snRNA snRNA MGP_LPJ_T0079627.1 MGP_LPJ_G0031113.1 mouse_genomes_project 6 124174100 124203390 + MGP_LPJ_P0079627 Usp18 protein_coding protein_coding MGP_LPJ_T0079628.1 MGP_LPJ_G0031113.1 mouse_genomes_project 6 124184276 124186234 + Usp18 protein_coding retained_intron MGP_LPJ_T0079629.1 MGP_LPJ_G0031113.1 mouse_genomes_project 6 124193857 124195594 + Usp18 protein_coding retained_intron MGP_LPJ_T0079630.1 MGP_LPJ_G0031113.1 mouse_genomes_project 6 124201050 124201966 + MGP_LPJ_P0079630 Usp18 protein_coding protein_coding MGP_LPJ_T0015394.1 MGP_LPJ_G0013485.1 mouse_genomes_project 6 72524136 72524632 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002129.1 MGP_LPJ_G0002039.1 mouse_genomes_project 6 102892085 102894165 + TEC TEC MGP_LPJ_T0078082.1 MGP_LPJ_G0030823.1 mouse_genomes_project 6 84156598 84164507 + MGP_LPJ_P0078082 1700003E16Rik protein_coding protein_coding MGP_LPJ_T0078083.1 MGP_LPJ_G0030823.1 mouse_genomes_project 6 84156695 84164453 + MGP_LPJ_P0078083 1700003E16Rik protein_coding protein_coding MGP_LPJ_T0015201.1 MGP_LPJ_G0013292.1 mouse_genomes_project 6 9114824 9115122 + processed_pseudogene processed_pseudogene MGP_LPJ_T0077360.1 MGP_LPJ_G0030650.1 mouse_genomes_project 6 51442948 51447215 - MGP_LPJ_P0077360 Hoxa9 protein_coding protein_coding MGP_LPJ_T0077361.1 MGP_LPJ_G0030650.1 mouse_genomes_project 6 51443810 51450949 - Hoxa9 protein_coding processed_transcript MGP_LPJ_T0077362.1 MGP_LPJ_G0030650.1 mouse_genomes_project 6 51443967 51446033 - MGP_LPJ_P0077362 Hoxa9 protein_coding protein_coding MGP_LPJ_T0077363.1 MGP_LPJ_G0030650.1 mouse_genomes_project 6 51444169 51450144 - Hoxa9 protein_coding processed_transcript MGP_LPJ_T0077364.1 MGP_LPJ_G0030650.1 mouse_genomes_project 6 51448111 51450393 - Hoxa9 protein_coding retained_intron MGP_LPJ_T0077061.1 MGP_LPJ_G0030578.1 mouse_genomes_project 6 41810704 41815021 + MGP_LPJ_P0077061 Olfr434 protein_coding protein_coding MGP_LPJ_T0077062.1 MGP_LPJ_G0030578.1 mouse_genomes_project 6 41814522 41827230 + MGP_LPJ_P0077062 Olfr434 protein_coding protein_coding MGP_LPJ_T0005125.1 MGP_LPJ_G0004372.1 mouse_genomes_project 6 138594674 138605235 - Gm17089 antisense antisense MGP_LPJ_T0005082.1 MGP_LPJ_G0004336.1 mouse_genomes_project 6 115605896 115616011 - antisense antisense MGP_LPJ_T0005083.1 MGP_LPJ_G0004336.1 mouse_genomes_project 6 115606127 115615997 - antisense antisense MGP_LPJ_T0005084.1 MGP_LPJ_G0004336.1 mouse_genomes_project 6 115608866 115616030 - antisense antisense MGP_LPJ_T0005085.1 MGP_LPJ_G0004336.1 mouse_genomes_project 6 115609242 115616153 - antisense antisense MGP_LPJ_T0100915.1 MGP_LPJ_G0039178.1 mouse_genomes_project 6 102574081 102574215 - Gm23234 snoRNA snoRNA MGP_LPJ_T0077176.1 MGP_LPJ_G0030602.1 mouse_genomes_project 6 47522575 47544207 + MGP_LPJ_P0077176 Gm45021 protein_coding protein_coding MGP_LPJ_T0000339.1 MGP_LPJ_G0000277.1 mouse_genomes_project 6 68968741 68969027 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0015585.1 MGP_LPJ_G0013676.1 mouse_genomes_project 6 136359908 136360389 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015229.1 MGP_LPJ_G0013320.1 mouse_genomes_project 6 20405408 20406594 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008535.1 MGP_LPJ_G0006911.1 mouse_genomes_project 6 19415125 19420310 - Gm3289 lincRNA lincRNA MGP_LPJ_T0002109.1 MGP_LPJ_G0002019.1 mouse_genomes_project 6 93247390 93248416 - TEC TEC MGP_LPJ_T0015466.1 MGP_LPJ_G0013557.1 mouse_genomes_project 6 102279839 102339422 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004962.1 MGP_LPJ_G0004259.1 mouse_genomes_project 6 38007276 38015970 - Gm16272 antisense antisense MGP_LPJ_T0099636.1 MGP_LPJ_G0037899.1 mouse_genomes_project 6 18656907 18657010 + Gm26373 snRNA snRNA MGP_LPJ_T0015463.1 MGP_LPJ_G0013554.1 mouse_genomes_project 6 100817355 100817831 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101388.1 MGP_LPJ_G0039576.1 mouse_genomes_project 6 102297603 102298635 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0101389.1 MGP_LPJ_G0039576.1 mouse_genomes_project 6 102298506 102300720 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0001936.1 MGP_LPJ_G0001846.1 mouse_genomes_project 6 1250411 1252203 + TEC TEC MGP_LPJ_T0076617.1 MGP_LPJ_G0030455.1 mouse_genomes_project 6 30187229 30195731 + 1700012A03Rik protein_coding processed_transcript MGP_LPJ_T0076618.1 MGP_LPJ_G0030455.1 mouse_genomes_project 6 30187251 30195731 + 1700012A03Rik protein_coding processed_transcript MGP_LPJ_T0076619.1 MGP_LPJ_G0030455.1 mouse_genomes_project 6 30187268 30195725 + MGP_LPJ_P0076619 1700012A03Rik protein_coding protein_coding MGP_LPJ_T0076620.1 MGP_LPJ_G0030455.1 mouse_genomes_project 6 30194950 30195431 + 1700012A03Rik protein_coding processed_transcript MGP_LPJ_T0002029.1 MGP_LPJ_G0001939.1 mouse_genomes_project 6 71491753 71492659 - TEC TEC MGP_LPJ_T0015323.1 MGP_LPJ_G0013414.1 mouse_genomes_project 6 60146020 60146202 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005019.1 MGP_LPJ_G0004300.1 mouse_genomes_project 6 84723373 84742420 - Vax2os antisense antisense MGP_LPJ_T0005020.1 MGP_LPJ_G0004300.1 mouse_genomes_project 6 84730673 84741151 - Vax2os antisense antisense MGP_LPJ_T0005021.1 MGP_LPJ_G0004300.1 mouse_genomes_project 6 84732347 84733761 - Vax2os antisense antisense MGP_LPJ_T0005022.1 MGP_LPJ_G0004300.1 mouse_genomes_project 6 84732697 84733840 - Vax2os antisense antisense MGP_LPJ_T0076726.1 MGP_LPJ_G0030473.1 mouse_genomes_project 6 33249784 33252590 - Cnot4 protein_coding retained_intron MGP_LPJ_T0076727.1 MGP_LPJ_G0030473.1 mouse_genomes_project 6 33249784 33368869 - MGP_LPJ_P0076727 Cnot4 protein_coding protein_coding MGP_LPJ_T0076728.1 MGP_LPJ_G0030473.1 mouse_genomes_project 6 33249785 33368938 - MGP_LPJ_P0076728 Cnot4 protein_coding protein_coding MGP_LPJ_T0076729.1 MGP_LPJ_G0030473.1 mouse_genomes_project 6 33249790 33368933 - MGP_LPJ_P0076729 Cnot4 protein_coding protein_coding MGP_LPJ_T0076730.1 MGP_LPJ_G0030473.1 mouse_genomes_project 6 33274954 33368959 - MGP_LPJ_P0076730 Cnot4 protein_coding protein_coding MGP_LPJ_T0076731.1 MGP_LPJ_G0030473.1 mouse_genomes_project 6 33276257 33316952 - MGP_LPJ_P0076731 Cnot4 protein_coding unknown_likely_coding MGP_LPJ_T0076732.1 MGP_LPJ_G0030473.1 mouse_genomes_project 6 33282521 33286462 - Cnot4 protein_coding retained_intron MGP_LPJ_T0076733.1 MGP_LPJ_G0030473.1 mouse_genomes_project 6 33282952 33368931 - Cnot4 protein_coding processed_transcript MGP_LPJ_T0015471.1 MGP_LPJ_G0013562.1 mouse_genomes_project 6 103784103 103784559 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000331.1 MGP_LPJ_G0000269.1 mouse_genomes_project 6 68507246 68507504 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0010767.1 MGP_LPJ_G0008885.1 mouse_genomes_project 6 15841325 15841395 - Gm26233 miRNA miRNA MGP_LPJ_T0005005.1 MGP_LPJ_G0004291.1 mouse_genomes_project 6 73179499 73185376 + Gm15402 antisense antisense MGP_LPJ_T0079382.1 MGP_LPJ_G0031073.1 mouse_genomes_project 6 119369133 119371350 + MGP_LPJ_P0079382 8430408G22Rik protein_coding protein_coding MGP_LPJ_T0079383.1 MGP_LPJ_G0031073.1 mouse_genomes_project 6 119369152 119371350 + MGP_LPJ_P0079383 8430408G22Rik protein_coding protein_coding MGP_LPJ_T0079384.1 MGP_LPJ_G0031073.1 mouse_genomes_project 6 119369220 119370435 + MGP_LPJ_P0079384 8430408G22Rik protein_coding protein_coding MGP_LPJ_T0077817.1 MGP_LPJ_G0030766.1 mouse_genomes_project 6 72534242 72594685 + MGP_LPJ_P0077817 St3gal5 protein_coding protein_coding MGP_LPJ_T0077818.1 MGP_LPJ_G0030766.1 mouse_genomes_project 6 72534273 72594685 + MGP_LPJ_P0077818 St3gal5 protein_coding protein_coding MGP_LPJ_T0077819.1 MGP_LPJ_G0030766.1 mouse_genomes_project 6 72534407 72587276 + MGP_LPJ_P0077819 St3gal5 protein_coding protein_coding MGP_LPJ_T0077820.1 MGP_LPJ_G0030766.1 mouse_genomes_project 6 72553557 72582702 + MGP_LPJ_P0077820 St3gal5 protein_coding protein_coding MGP_LPJ_T0079577.1 MGP_LPJ_G0031104.1 mouse_genomes_project 6 123393521 123417343 - MGP_LPJ_P0079577 Cecr5 protein_coding protein_coding MGP_LPJ_T0079578.1 MGP_LPJ_G0031104.1 mouse_genomes_project 6 123405887 123417328 - Cecr5 protein_coding retained_intron MGP_LPJ_T0079579.1 MGP_LPJ_G0031104.1 mouse_genomes_project 6 123406766 123417314 - Cecr5 protein_coding retained_intron MGP_LPJ_T0079580.1 MGP_LPJ_G0031104.1 mouse_genomes_project 6 123415991 123417326 - Cecr5 protein_coding retained_intron MGP_LPJ_T0098660.1 MGP_LPJ_G0036930.1 mouse_genomes_project 6 133306972 133307566 + Gm43914 sense_intronic sense_intronic MGP_LPJ_T0080455.1 MGP_LPJ_G0031337.1 mouse_genomes_project 6 141541101 141561327 - MGP_LPJ_P0080455 Arhgdib protein_coding protein_coding MGP_LPJ_T0080456.1 MGP_LPJ_G0031337.1 mouse_genomes_project 6 141541101 141561577 - MGP_LPJ_P0080456 Arhgdib protein_coding protein_coding MGP_LPJ_T0080458.1 MGP_LPJ_G0031337.1 mouse_genomes_project 6 141541444 141561737 - MGP_LPJ_P0080458 Arhgdib protein_coding protein_coding MGP_LPJ_T0080459.1 MGP_LPJ_G0031337.1 mouse_genomes_project 6 141541654 141561706 - MGP_LPJ_P0080459 Arhgdib protein_coding protein_coding MGP_LPJ_T0080460.1 MGP_LPJ_G0031337.1 mouse_genomes_project 6 141551885 141559376 - MGP_LPJ_P0080460 Arhgdib protein_coding protein_coding MGP_LPJ_T0079751.1 MGP_LPJ_G0031146.1 mouse_genomes_project 6 127203650 127249619 + MGP_LPJ_P0079751 Vmn2r24 protein_coding protein_coding MGP_LPJ_T0002758.1 MGP_LPJ_G0002630.1 mouse_genomes_project 6 39596155 39596415 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0015340.1 MGP_LPJ_G0013431.1 mouse_genomes_project 6 65046063 65046857 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015191.1 MGP_LPJ_G0013282.1 mouse_genomes_project 6 4514685 4515322 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008550.1 MGP_LPJ_G0006922.1 mouse_genomes_project 6 29196072 29197881 + Gm13833 lincRNA lincRNA MGP_LPJ_T0102251.1 MGP_LPJ_G0040288.1 mouse_genomes_project 6 91363040 91363982 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002061.1 MGP_LPJ_G0001971.1 mouse_genomes_project 6 81278811 81281687 + TEC TEC MGP_LPJ_T0000315.1 MGP_LPJ_G0000253.1 mouse_genomes_project 6 67838760 67839226 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0002040.1 MGP_LPJ_G0001950.1 mouse_genomes_project 6 73110771 73114180 - TEC TEC MGP_LPJ_T0002071.1 MGP_LPJ_G0001981.1 mouse_genomes_project 6 86803896 86806195 + TEC TEC MGP_LPJ_T0005053.1 MGP_LPJ_G0004318.1 mouse_genomes_project 6 90148418 90157868 - Gm26588 antisense antisense MGP_LPJ_T0005054.1 MGP_LPJ_G0004318.1 mouse_genomes_project 6 90151238 90156508 - Gm26588 antisense antisense MGP_LPJ_T0015333.1 MGP_LPJ_G0013424.1 mouse_genomes_project 6 63608772 63608988 - processed_pseudogene processed_pseudogene MGP_LPJ_T0076783.1 MGP_LPJ_G0030487.1 mouse_genomes_project 6 36459843 36594427 - MGP_LPJ_P0076783 D630045J12Rik protein_coding protein_coding MGP_LPJ_T0076784.1 MGP_LPJ_G0030487.1 mouse_genomes_project 6 36462685 36484104 - D630045J12Rik protein_coding retained_intron MGP_LPJ_T0076785.1 MGP_LPJ_G0030487.1 mouse_genomes_project 6 36462691 36484047 - D630045J12Rik protein_coding retained_intron MGP_LPJ_T0076786.1 MGP_LPJ_G0030487.1 mouse_genomes_project 6 36474106 36532407 - D630045J12Rik protein_coding retained_intron MGP_LPJ_T0076787.1 MGP_LPJ_G0030487.1 mouse_genomes_project 6 36494947 36505372 - D630045J12Rik protein_coding retained_intron MGP_LPJ_T0080002.1 MGP_LPJ_G0031191.1 mouse_genomes_project 6 128731652 128736003 - MGP_LPJ_P0080002 Cd27 protein_coding protein_coding MGP_LPJ_T0080003.1 MGP_LPJ_G0031191.1 mouse_genomes_project 6 128732153 128735987 - MGP_LPJ_P0080003 Cd27 protein_coding protein_coding MGP_LPJ_T0080004.1 MGP_LPJ_G0031191.1 mouse_genomes_project 6 128732224 128735946 - MGP_LPJ_P0080004 Cd27 protein_coding protein_coding MGP_LPJ_T0080005.1 MGP_LPJ_G0031191.1 mouse_genomes_project 6 128732558 128733817 - Cd27 protein_coding retained_intron MGP_LPJ_T0080006.1 MGP_LPJ_G0031191.1 mouse_genomes_project 6 128732694 128733677 - Cd27 protein_coding retained_intron MGP_LPJ_T0080007.1 MGP_LPJ_G0031191.1 mouse_genomes_project 6 128735101 128735996 - Cd27 protein_coding retained_intron MGP_LPJ_T0015372.1 MGP_LPJ_G0013463.1 mouse_genomes_project 6 68119602 68120279 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015185.1 MGP_LPJ_G0013276.1 mouse_genomes_project 6 3175457 3175682 - processed_pseudogene processed_pseudogene MGP_LPJ_T0080544.1 MGP_LPJ_G0031350.1 mouse_genomes_project 6 144616934 144753200 + MGP_LPJ_P0080544 Pik3c2g protein_coding protein_coding MGP_LPJ_T0015280.1 MGP_LPJ_G0013371.1 mouse_genomes_project 6 46620604 46620937 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098293.1 MGP_LPJ_G0036574.1 mouse_genomes_project 6 136845737 136845858 + n-R5s166 rRNA rRNA MGP_LPJ_T0008799.1 MGP_LPJ_G0007106.1 mouse_genomes_project 6 153393483 153394690 - Gm17216 lincRNA lincRNA MGP_LPJ_T0015624.1 MGP_LPJ_G0013715.1 mouse_genomes_project 6 152145131 152145590 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008539.1 MGP_LPJ_G0006914.1 mouse_genomes_project 6 26868836 26922771 + Gm3294 lincRNA lincRNA MGP_LPJ_T0000203.1 MGP_LPJ_G0000152.1 mouse_genomes_project 6 69637203 69637716 - MGP_LPJ_P0000203 Igkv4-72 IG_V_gene IG_V_gene MGP_LPJ_T0079911.1 MGP_LPJ_G0031178.1 mouse_genomes_project 6 128482868 128489286 + MGP_LPJ_P0079911 Pianp protein_coding protein_coding MGP_LPJ_T0079912.1 MGP_LPJ_G0031178.1 mouse_genomes_project 6 128483051 128489286 + MGP_LPJ_P0079912 Pianp protein_coding protein_coding MGP_LPJ_T0079913.1 MGP_LPJ_G0031178.1 mouse_genomes_project 6 128483264 128485921 + MGP_LPJ_P0079913 Pianp protein_coding protein_coding MGP_LPJ_T0079914.1 MGP_LPJ_G0031178.1 mouse_genomes_project 6 128484626 128489286 + MGP_LPJ_P0079914 Pianp protein_coding protein_coding MGP_LPJ_T0079915.1 MGP_LPJ_G0031178.1 mouse_genomes_project 6 128484799 128488333 + MGP_LPJ_P0079915 Pianp protein_coding protein_coding MGP_LPJ_T0079916.1 MGP_LPJ_G0031178.1 mouse_genomes_project 6 128484828 128485635 + MGP_LPJ_P0079916 Pianp protein_coding protein_coding MGP_LPJ_T0079917.1 MGP_LPJ_G0031178.1 mouse_genomes_project 6 128485851 128487239 + MGP_LPJ_P0079917 Pianp protein_coding protein_coding MGP_LPJ_T0002058.1 MGP_LPJ_G0001968.1 mouse_genomes_project 6 81109147 81112697 + TEC TEC MGP_LPJ_T0002133.1 MGP_LPJ_G0002043.1 mouse_genomes_project 6 103457537 103460397 - TEC TEC MGP_LPJ_T0100877.1 MGP_LPJ_G0039140.1 mouse_genomes_project 6 25484212 25484329 + Gm26310 snoRNA snoRNA MGP_LPJ_T0077999.1 MGP_LPJ_G0030808.1 mouse_genomes_project 6 84029765 84033149 + Loxl3 protein_coding processed_transcript MGP_LPJ_T0078000.1 MGP_LPJ_G0030808.1 mouse_genomes_project 6 84029765 84050145 + MGP_LPJ_P0078000 Loxl3 protein_coding protein_coding MGP_LPJ_T0078001.1 MGP_LPJ_G0030808.1 mouse_genomes_project 6 84029765 84050145 + MGP_LPJ_P0078001 Loxl3 protein_coding protein_coding MGP_LPJ_T0078002.1 MGP_LPJ_G0030808.1 mouse_genomes_project 6 84035647 84042481 + Loxl3 protein_coding processed_transcript MGP_LPJ_T0078003.1 MGP_LPJ_G0030808.1 mouse_genomes_project 6 84047449 84048249 + Loxl3 protein_coding retained_intron MGP_LPJ_T0000320.1 MGP_LPJ_G0000258.1 mouse_genomes_project 6 68099497 68099944 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0008639.1 MGP_LPJ_G0006983.1 mouse_genomes_project 6 71556189 71557453 + Gm44427 lincRNA lincRNA MGP_LPJ_T0079879.1 MGP_LPJ_G0031172.1 mouse_genomes_project 6 128335970 128341436 - MGP_LPJ_P0079879 Gpr162 protein_coding protein_coding MGP_LPJ_T0079880.1 MGP_LPJ_G0031172.1 mouse_genomes_project 6 128335973 128341231 - Gpr162 protein_coding retained_intron MGP_LPJ_T0079881.1 MGP_LPJ_G0031172.1 mouse_genomes_project 6 128335974 128341502 - MGP_LPJ_P0079881 Gpr162 protein_coding protein_coding MGP_LPJ_T0079882.1 MGP_LPJ_G0031172.1 mouse_genomes_project 6 128339253 128341231 - Gpr162 protein_coding processed_transcript MGP_LPJ_T0015190.1 MGP_LPJ_G0013281.1 mouse_genomes_project 6 4416954 4417315 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011851.1 MGP_LPJ_G0009945.1 mouse_genomes_project 6 133344780 133356481 - MGP_LPJ_P0011851 Clec7a polymorphic_pseudogene protein_coding MGP_LPJ_T0011852.1 MGP_LPJ_G0009945.1 mouse_genomes_project 6 133344780 133356476 - MGP_LPJ_P0011852 Clec7a polymorphic_pseudogene polymorphic_pseudogene MGP_LPJ_T0011853.1 MGP_LPJ_G0009945.1 mouse_genomes_project 6 133346223 133356481 - MGP_LPJ_P0011853 Clec7a polymorphic_pseudogene protein_coding MGP_LPJ_T0011854.1 MGP_LPJ_G0009945.1 mouse_genomes_project 6 133354238 133356483 - Clec7a polymorphic_pseudogene retained_intron MGP_LPJ_T0080219.1 MGP_LPJ_G0009945.1 mouse_genomes_project 6 133346238 133356388 - MGP_LPJ_P0080219 Clec7a polymorphic_pseudogene unknown_likely_coding MGP_LPJ_T0076843.1 MGP_LPJ_G0030500.1 mouse_genomes_project 6 37738798 37783121 - MGP_LPJ_P0076843 Slc37a3 protein_coding protein_coding MGP_LPJ_T0076844.1 MGP_LPJ_G0030500.1 mouse_genomes_project 6 37740010 37783118 - MGP_LPJ_P0076844 Slc37a3 protein_coding nonsense_mediated_decay MGP_LPJ_T0076845.1 MGP_LPJ_G0030500.1 mouse_genomes_project 6 37740011 37752855 - Slc37a3 protein_coding processed_transcript MGP_LPJ_T0076846.1 MGP_LPJ_G0030500.1 mouse_genomes_project 6 37740014 37778376 - MGP_LPJ_P0076846 Slc37a3 protein_coding nonsense_mediated_decay MGP_LPJ_T0076847.1 MGP_LPJ_G0030500.1 mouse_genomes_project 6 37740631 37752227 - Slc37a3 protein_coding processed_transcript MGP_LPJ_T0076848.1 MGP_LPJ_G0030500.1 mouse_genomes_project 6 37748758 37752199 - Slc37a3 protein_coding retained_intron MGP_LPJ_T0076849.1 MGP_LPJ_G0030500.1 mouse_genomes_project 6 37759845 37783105 - MGP_LPJ_P0076849 Slc37a3 protein_coding protein_coding MGP_LPJ_T0076850.1 MGP_LPJ_G0030500.1 mouse_genomes_project 6 37762327 37783118 - MGP_LPJ_P0076850 Slc37a3 protein_coding protein_coding MGP_LPJ_T0076851.1 MGP_LPJ_G0030500.1 mouse_genomes_project 6 37765827 37783093 - MGP_LPJ_P0076851 Slc37a3 protein_coding protein_coding MGP_LPJ_T0076852.1 MGP_LPJ_G0030500.1 mouse_genomes_project 6 37765852 37783082 - MGP_LPJ_P0076852 Slc37a3 protein_coding protein_coding MGP_LPJ_T0076853.1 MGP_LPJ_G0030500.1 mouse_genomes_project 6 37765854 37783108 - MGP_LPJ_P0076853 Slc37a3 protein_coding protein_coding MGP_LPJ_T0076854.1 MGP_LPJ_G0030500.1 mouse_genomes_project 6 37772636 37783103 - MGP_LPJ_P0076854 Slc37a3 protein_coding protein_coding MGP_LPJ_T0076855.1 MGP_LPJ_G0030500.1 mouse_genomes_project 6 37773406 37783085 - Slc37a3 protein_coding processed_transcript MGP_LPJ_T0076856.1 MGP_LPJ_G0030500.1 mouse_genomes_project 6 37773415 37783064 - Slc37a3 protein_coding processed_transcript MGP_LPJ_T0078500.1 MGP_LPJ_G0030902.1 mouse_genomes_project 6 89499434 89521318 + MGP_LPJ_P0078500 Rpn1 protein_coding protein_coding MGP_LPJ_T0078501.1 MGP_LPJ_G0030902.1 mouse_genomes_project 6 89499515 89511673 + MGP_LPJ_P0078501 Rpn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078502.1 MGP_LPJ_G0030902.1 mouse_genomes_project 6 89509927 89517119 + Rpn1 protein_coding retained_intron MGP_LPJ_T0078503.1 MGP_LPJ_G0030902.1 mouse_genomes_project 6 89515300 89517376 + Rpn1 protein_coding retained_intron MGP_LPJ_T0078504.1 MGP_LPJ_G0030902.1 mouse_genomes_project 6 89517584 89519401 + Rpn1 protein_coding retained_intron MGP_LPJ_T0078615.1 MGP_LPJ_G0030920.1 mouse_genomes_project 6 91291434 91292532 - MGP_LPJ_P0078615 Vmn1r42 protein_coding protein_coding MGP_LPJ_T0077371.1 MGP_LPJ_G0030653.1 mouse_genomes_project 6 51478481 51482256 - MGP_LPJ_P0077371 Hoxa13 protein_coding protein_coding MGP_LPJ_T0077372.1 MGP_LPJ_G0030653.1 mouse_genomes_project 6 51479658 51482255 - Hoxa13 protein_coding processed_transcript MGP_LPJ_T0077373.1 MGP_LPJ_G0030653.1 mouse_genomes_project 6 51479658 51482255 - Hoxa13 protein_coding processed_transcript MGP_LPJ_T0077374.1 MGP_LPJ_G0030653.1 mouse_genomes_project 6 51479658 51482255 - Hoxa13 protein_coding processed_transcript MGP_LPJ_T0077375.1 MGP_LPJ_G0030653.1 mouse_genomes_project 6 51479658 51482255 - MGP_LPJ_P0077375 Hoxa13 protein_coding protein_coding MGP_LPJ_T0080295.1 MGP_LPJ_G0031283.1 mouse_genomes_project 6 136701136 136712522 - MGP_LPJ_P0080295 Gm8882 protein_coding protein_coding MGP_LPJ_T0008725.1 MGP_LPJ_G0007052.1 mouse_genomes_project 6 120249256 120254079 + Gm43983 lincRNA lincRNA MGP_LPJ_T0099655.1 MGP_LPJ_G0037918.1 mouse_genomes_project 6 66926256 66926390 + Gm25260 snRNA snRNA MGP_LPJ_T0102267.1 MGP_LPJ_G0040304.1 mouse_genomes_project 6 134483391 134508803 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0076567.1 MGP_LPJ_G0030447.1 mouse_genomes_project 6 28671962 28678108 + MGP_LPJ_P0076567 Cpa1 protein_coding protein_coding MGP_LPJ_T0076568.1 MGP_LPJ_G0030447.1 mouse_genomes_project 6 28673085 28674619 + Cpa1 protein_coding retained_intron MGP_LPJ_T0002704.1 MGP_LPJ_G0002584.1 mouse_genomes_project 6 39536395 39536934 + MGP_LPJ_P0002704 Trbv3 TR_V_gene TR_V_gene MGP_LPJ_T0076166.1 MGP_LPJ_G0030372.1 mouse_genomes_project 6 14366612 14415186 + MGP_LPJ_P0076166 Tes protein_coding protein_coding MGP_LPJ_T0076167.1 MGP_LPJ_G0030372.1 mouse_genomes_project 6 14366623 14375837 + Tes protein_coding retained_intron MGP_LPJ_T0076168.1 MGP_LPJ_G0030372.1 mouse_genomes_project 6 14366631 14406752 + MGP_LPJ_P0076168 Tes protein_coding protein_coding MGP_LPJ_T0076169.1 MGP_LPJ_G0030372.1 mouse_genomes_project 6 14366655 14396355 + Tes protein_coding processed_transcript MGP_LPJ_T0076170.1 MGP_LPJ_G0030372.1 mouse_genomes_project 6 14366687 14415191 + MGP_LPJ_P0076170 Tes protein_coding protein_coding MGP_LPJ_T0008724.1 MGP_LPJ_G0007051.1 mouse_genomes_project 6 120171061 120174102 - Gm4640 lincRNA lincRNA MGP_LPJ_T0015338.1 MGP_LPJ_G0013429.1 mouse_genomes_project 6 65005473 65005905 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002523.1 MGP_LPJ_G0002426.1 mouse_genomes_project 6 40049721 40049733 + MGP_LPJ_P0002523 Trbd1 TR_D_gene TR_D_gene MGP_LPJ_T0002719.1 MGP_LPJ_G0002598.1 mouse_genomes_project 6 39690270 39690763 + MGP_LPJ_P0002719 Trbv21 TR_V_gene TR_V_gene MGP_LPJ_T0002720.1 MGP_LPJ_G0002598.1 mouse_genomes_project 6 39690475 39690765 + MGP_LPJ_P0002720 Trbv21 TR_V_gene TR_V_gene MGP_LPJ_T0078447.1 MGP_LPJ_G0030892.1 mouse_genomes_project 6 89110891 89114074 + Efcc1 protein_coding retained_intron MGP_LPJ_T0078448.1 MGP_LPJ_G0030892.1 mouse_genomes_project 6 89110891 89136298 + MGP_LPJ_P0078448 Efcc1 protein_coding protein_coding MGP_LPJ_T0078449.1 MGP_LPJ_G0030892.1 mouse_genomes_project 6 89110915 89137427 + MGP_LPJ_P0078449 Efcc1 protein_coding protein_coding MGP_LPJ_T0078450.1 MGP_LPJ_G0030892.1 mouse_genomes_project 6 89112831 89131952 + Efcc1 protein_coding processed_transcript MGP_LPJ_T0078451.1 MGP_LPJ_G0030892.1 mouse_genomes_project 6 89134368 89135609 + Efcc1 protein_coding retained_intron MGP_LPJ_T0077829.1 MGP_LPJ_G0030769.1 mouse_genomes_project 6 72770593 72799643 - MGP_LPJ_P0077829 Usp39 protein_coding protein_coding MGP_LPJ_T0077830.1 MGP_LPJ_G0030769.1 mouse_genomes_project 6 72773215 72786925 - Usp39 protein_coding retained_intron MGP_LPJ_T0077831.1 MGP_LPJ_G0030769.1 mouse_genomes_project 6 72789816 72797583 - MGP_LPJ_P0077831 Usp39 protein_coding nonsense_mediated_decay MGP_LPJ_T0076562.1 MGP_LPJ_G0030445.1 mouse_genomes_project 6 28597124 28622584 + MGP_LPJ_P0076562 Cpa4 protein_coding protein_coding MGP_LPJ_T0078568.1 MGP_LPJ_G0030912.1 mouse_genomes_project 6 90331581 90349176 - MGP_LPJ_P0078568 Mcm2 protein_coding protein_coding MGP_LPJ_T0078569.1 MGP_LPJ_G0030912.1 mouse_genomes_project 6 90338951 90342445 - Mcm2 protein_coding retained_intron MGP_LPJ_T0078570.1 MGP_LPJ_G0030912.1 mouse_genomes_project 6 90340411 90343715 - MGP_LPJ_P0078570 Mcm2 protein_coding nonsense_mediated_decay MGP_LPJ_T0078571.1 MGP_LPJ_G0030912.1 mouse_genomes_project 6 90343571 90349097 - Mcm2 protein_coding processed_transcript MGP_LPJ_T0078572.1 MGP_LPJ_G0030912.1 mouse_genomes_project 6 90343682 90349084 - MGP_LPJ_P0078572 Mcm2 protein_coding nonsense_mediated_decay MGP_LPJ_T0078573.1 MGP_LPJ_G0030912.1 mouse_genomes_project 6 90343698 90344257 - Mcm2 protein_coding retained_intron MGP_LPJ_T0078574.1 MGP_LPJ_G0030912.1 mouse_genomes_project 6 90347343 90349073 - Mcm2 protein_coding retained_intron MGP_LPJ_T0005080.1 MGP_LPJ_G0004335.1 mouse_genomes_project 6 114785220 114788408 - 5031434C07Rik antisense antisense MGP_LPJ_T0005081.1 MGP_LPJ_G0004335.1 mouse_genomes_project 6 114785428 114788409 - 5031434C07Rik antisense antisense MGP_LPJ_T0008571.1 MGP_LPJ_G0006936.1 mouse_genomes_project 6 32740720 32752075 + Gm13860 lincRNA lincRNA MGP_LPJ_T0001975.1 MGP_LPJ_G0001885.1 mouse_genomes_project 6 31187629 31190625 - TEC TEC MGP_LPJ_T0008750.1 MGP_LPJ_G0007075.1 mouse_genomes_project 6 132691113 132691727 - Gm44066 lincRNA lincRNA MGP_LPJ_T0080389.1 MGP_LPJ_G0031320.1 mouse_genomes_project 6 139556879 139586157 - MGP_LPJ_P0080389 Hebp1 protein_coding protein_coding MGP_LPJ_T0080390.1 MGP_LPJ_G0031320.1 mouse_genomes_project 6 139573342 139619518 - Hebp1 protein_coding processed_transcript MGP_LPJ_T0080391.1 MGP_LPJ_G0031320.1 mouse_genomes_project 6 139583512 139586077 - Hebp1 protein_coding retained_intron MGP_LPJ_T0102258.1 MGP_LPJ_G0040295.1 mouse_genomes_project 6 127404813 127412313 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0076789.1 MGP_LPJ_G0030489.1 mouse_genomes_project 6 36645948 36698457 - MGP_LPJ_P0076789 Zc3hav1 protein_coding protein_coding MGP_LPJ_T0076790.1 MGP_LPJ_G0030489.1 mouse_genomes_project 6 36652254 36698457 - MGP_LPJ_P0076790 Zc3hav1 protein_coding protein_coding MGP_LPJ_T0076791.1 MGP_LPJ_G0030489.1 mouse_genomes_project 6 36657335 36698787 - MGP_LPJ_P0076791 Zc3hav1 protein_coding protein_coding MGP_LPJ_T0076792.1 MGP_LPJ_G0030489.1 mouse_genomes_project 6 36657335 36698787 - MGP_LPJ_P0076792 Zc3hav1 protein_coding protein_coding MGP_LPJ_T0018266.1 MGP_LPJ_G0015567.1 mouse_genomes_project 6 133420179 133422046 - 1700101I11Rik processed_transcript TEC MGP_LPJ_T0018267.1 MGP_LPJ_G0015567.1 mouse_genomes_project 6 133420323 133421514 - 1700101I11Rik processed_transcript antisense MGP_LPJ_T0079821.1 MGP_LPJ_G0031164.1 mouse_genomes_project 6 128240353 128243909 - Eno2 protein_coding retained_intron MGP_LPJ_T0079822.1 MGP_LPJ_G0031164.1 mouse_genomes_project 6 128240355 128250033 - MGP_LPJ_P0079822 Eno2 protein_coding protein_coding MGP_LPJ_T0079823.1 MGP_LPJ_G0031164.1 mouse_genomes_project 6 128240355 128250085 - MGP_LPJ_P0079823 Eno2 protein_coding protein_coding MGP_LPJ_T0079824.1 MGP_LPJ_G0031164.1 mouse_genomes_project 6 128240665 128248749 - Eno2 protein_coding retained_intron MGP_LPJ_T0079825.1 MGP_LPJ_G0031164.1 mouse_genomes_project 6 128241221 128249932 - MGP_LPJ_P0079825 Eno2 protein_coding protein_coding MGP_LPJ_T0079826.1 MGP_LPJ_G0031164.1 mouse_genomes_project 6 128241454 128243583 - Eno2 protein_coding retained_intron MGP_LPJ_T0079827.1 MGP_LPJ_G0031164.1 mouse_genomes_project 6 128241513 128243619 - Eno2 protein_coding retained_intron MGP_LPJ_T0079828.1 MGP_LPJ_G0031164.1 mouse_genomes_project 6 128242953 128244218 - Eno2 protein_coding processed_transcript MGP_LPJ_T0079829.1 MGP_LPJ_G0031164.1 mouse_genomes_project 6 128244063 128248742 - MGP_LPJ_P0079829 Eno2 protein_coding nonsense_mediated_decay MGP_LPJ_T0079830.1 MGP_LPJ_G0031164.1 mouse_genomes_project 6 128244166 128248788 - MGP_LPJ_P0079830 Eno2 protein_coding protein_coding MGP_LPJ_T0079831.1 MGP_LPJ_G0031164.1 mouse_genomes_project 6 128246552 128249896 - MGP_LPJ_P0079831 Eno2 protein_coding nonsense_mediated_decay MGP_LPJ_T0079832.1 MGP_LPJ_G0031164.1 mouse_genomes_project 6 128246633 128248743 - MGP_LPJ_P0079832 Eno2 protein_coding nonsense_mediated_decay MGP_LPJ_T0079833.1 MGP_LPJ_G0031164.1 mouse_genomes_project 6 128246696 128249962 - MGP_LPJ_P0079833 Eno2 protein_coding protein_coding MGP_LPJ_T0079834.1 MGP_LPJ_G0031164.1 mouse_genomes_project 6 128247181 128248749 - Eno2 protein_coding retained_intron MGP_LPJ_T0079835.1 MGP_LPJ_G0031164.1 mouse_genomes_project 6 128247359 128249928 - Eno2 protein_coding retained_intron MGP_LPJ_T0079836.1 MGP_LPJ_G0031164.1 mouse_genomes_project 6 128248119 128249898 - MGP_LPJ_P0079836 Eno2 protein_coding protein_coding MGP_LPJ_T0000245.1 MGP_LPJ_G0000184.1 mouse_genomes_project 6 70852483 70963622 + MGP_LPJ_P0000245 Igkv3-1 IG_V_gene IG_V_gene MGP_LPJ_T0100912.1 MGP_LPJ_G0039175.1 mouse_genomes_project 6 99020668 99020799 - Gm26175 snoRNA snoRNA MGP_LPJ_T0098653.1 MGP_LPJ_G0036923.1 mouse_genomes_project 6 89781465 89781930 - Gm44265 sense_intronic sense_intronic MGP_LPJ_T0077482.1 MGP_LPJ_G0030676.1 mouse_genomes_project 6 54712059 54718600 + Ghrhr protein_coding retained_intron MGP_LPJ_T0077483.1 MGP_LPJ_G0030676.1 mouse_genomes_project 6 54712107 54725804 + MGP_LPJ_P0077483 Ghrhr protein_coding protein_coding MGP_LPJ_T0077484.1 MGP_LPJ_G0030676.1 mouse_genomes_project 6 54712129 54725593 + MGP_LPJ_P0077484 Ghrhr protein_coding protein_coding MGP_LPJ_T0080354.1 MGP_LPJ_G0031313.1 mouse_genomes_project 6 139227468 139259683 + MGP_LPJ_P0080354 Crebl2 protein_coding protein_coding MGP_LPJ_T0080355.1 MGP_LPJ_G0031313.1 mouse_genomes_project 6 139227542 139251326 + Crebl2 protein_coding retained_intron MGP_LPJ_T0080356.1 MGP_LPJ_G0031313.1 mouse_genomes_project 6 139227569 139256918 + MGP_LPJ_P0080356 Crebl2 protein_coding protein_coding MGP_LPJ_T0080357.1 MGP_LPJ_G0031313.1 mouse_genomes_project 6 139251946 139255370 + Crebl2 protein_coding retained_intron MGP_LPJ_T0079550.1 MGP_LPJ_G0031098.1 mouse_genomes_project 6 123068941 123108093 - B4galnt3 protein_coding processed_transcript MGP_LPJ_T0079551.1 MGP_LPJ_G0031098.1 mouse_genomes_project 6 123068962 123162062 - MGP_LPJ_P0079551 B4galnt3 protein_coding protein_coding MGP_LPJ_T0079552.1 MGP_LPJ_G0031098.1 mouse_genomes_project 6 123069677 123162062 - MGP_LPJ_P0079552 B4galnt3 protein_coding unknown_likely_coding MGP_LPJ_T0004975.1 MGP_LPJ_G0004270.1 mouse_genomes_project 6 51371221 51372848 + antisense antisense MGP_LPJ_T0004976.1 MGP_LPJ_G0004270.1 mouse_genomes_project 6 51372751 51382307 + antisense antisense MGP_LPJ_T0004977.1 MGP_LPJ_G0004270.1 mouse_genomes_project 6 51372843 51382208 + antisense antisense MGP_LPJ_T0077022.1 MGP_LPJ_G0030554.1 mouse_genomes_project 6 40880511 40881393 + MGP_LPJ_P0077022 Tas2r143 protein_coding protein_coding MGP_LPJ_T0077963.1 MGP_LPJ_G0030799.1 mouse_genomes_project 6 82873775 82910862 + MGP_LPJ_P0077963 Gcfc2 protein_coding protein_coding MGP_LPJ_T0077964.1 MGP_LPJ_G0030799.1 mouse_genomes_project 6 82873779 82910203 + MGP_LPJ_P0077964 Gcfc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0077965.1 MGP_LPJ_G0030799.1 mouse_genomes_project 6 82873786 82895370 + Gcfc2 protein_coding retained_intron MGP_LPJ_T0077966.1 MGP_LPJ_G0030799.1 mouse_genomes_project 6 82880815 82881268 + Gcfc2 protein_coding retained_intron MGP_LPJ_T0077967.1 MGP_LPJ_G0030799.1 mouse_genomes_project 6 82882969 82884397 + Gcfc2 protein_coding retained_intron MGP_LPJ_T0077968.1 MGP_LPJ_G0030799.1 mouse_genomes_project 6 82892504 82894875 + Gcfc2 protein_coding retained_intron MGP_LPJ_T0077969.1 MGP_LPJ_G0030799.1 mouse_genomes_project 6 82897653 82909007 + MGP_LPJ_P0077969 Gcfc2 protein_coding protein_coding MGP_LPJ_T0077970.1 MGP_LPJ_G0030799.1 mouse_genomes_project 6 82900828 82907995 + Gcfc2 protein_coding retained_intron MGP_LPJ_T0077222.1 MGP_LPJ_G0030616.1 mouse_genomes_project 6 47789178 47796417 - MGP_LPJ_P0077222 Tmem176b protein_coding protein_coding MGP_LPJ_T0077223.1 MGP_LPJ_G0030616.1 mouse_genomes_project 6 47789974 47796112 - MGP_LPJ_P0077223 Tmem176b protein_coding protein_coding MGP_LPJ_T0077224.1 MGP_LPJ_G0030616.1 mouse_genomes_project 6 47790795 47796429 - MGP_LPJ_P0077224 Tmem176b protein_coding protein_coding MGP_LPJ_T0077225.1 MGP_LPJ_G0030616.1 mouse_genomes_project 6 47790795 47796847 - MGP_LPJ_P0077225 Tmem176b protein_coding protein_coding MGP_LPJ_T0077226.1 MGP_LPJ_G0030616.1 mouse_genomes_project 6 47790797 47796099 - MGP_LPJ_P0077226 Tmem176b protein_coding protein_coding MGP_LPJ_T0077227.1 MGP_LPJ_G0030616.1 mouse_genomes_project 6 47790864 47795946 - MGP_LPJ_P0077227 Tmem176b protein_coding protein_coding MGP_LPJ_T0077228.1 MGP_LPJ_G0030616.1 mouse_genomes_project 6 47791149 47795806 - Tmem176b protein_coding retained_intron MGP_LPJ_T0005137.1 MGP_LPJ_G0004382.1 mouse_genomes_project 6 143309280 143328505 + B230110G15Rik antisense antisense MGP_LPJ_T0008549.1 MGP_LPJ_G0006921.1 mouse_genomes_project 6 29186932 29317439 - Lncpint lincRNA lincRNA MGP_LPJ_T0008551.1 MGP_LPJ_G0006921.1 mouse_genomes_project 6 29260661 29317398 - Lncpint lincRNA lincRNA MGP_LPJ_T0008552.1 MGP_LPJ_G0006921.1 mouse_genomes_project 6 29261614 29317385 - Lncpint lincRNA lincRNA MGP_LPJ_T0008553.1 MGP_LPJ_G0006921.1 mouse_genomes_project 6 29261662 29317311 - Lncpint lincRNA lincRNA MGP_LPJ_T0001968.1 MGP_LPJ_G0001878.1 mouse_genomes_project 6 26680312 26683564 + TEC TEC MGP_LPJ_T0080833.1 MGP_LPJ_G0031405.1 mouse_genomes_project 6 152407469 152420277 - MGP_LPJ_P0080833 Pthlh protein_coding protein_coding MGP_LPJ_T0080834.1 MGP_LPJ_G0031405.1 mouse_genomes_project 6 152407477 152420293 - MGP_LPJ_P0080834 Pthlh protein_coding protein_coding MGP_LPJ_T0005141.1 MGP_LPJ_G0004386.1 mouse_genomes_project 6 149022730 149024602 + Sox5os1 antisense antisense MGP_LPJ_T0077556.1 MGP_LPJ_G0030704.1 mouse_genomes_project 6 57044227 57119604 + MGP_LPJ_P0077556 protein_coding protein_coding MGP_LPJ_T0077557.1 MGP_LPJ_G0030704.1 mouse_genomes_project 6 57044235 57047649 + MGP_LPJ_P0077557 protein_coding nonsense_mediated_decay MGP_LPJ_T0077558.1 MGP_LPJ_G0030704.1 mouse_genomes_project 6 57044264 57117876 + MGP_LPJ_P0077558 protein_coding unknown_likely_coding MGP_LPJ_T0077559.1 MGP_LPJ_G0030704.1 mouse_genomes_project 6 57062147 57084962 + protein_coding retained_intron MGP_LPJ_T0077560.1 MGP_LPJ_G0030704.1 mouse_genomes_project 6 57064596 57068881 + protein_coding retained_intron MGP_LPJ_T0077561.1 MGP_LPJ_G0030704.1 mouse_genomes_project 6 57065421 57077439 + protein_coding retained_intron MGP_LPJ_T0077562.1 MGP_LPJ_G0030704.1 mouse_genomes_project 6 57068818 57078695 + protein_coding retained_intron MGP_LPJ_T0102245.1 MGP_LPJ_G0040282.1 mouse_genomes_project 6 86259576 86263177 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0010766.1 MGP_LPJ_G0008884.1 mouse_genomes_project 6 12627566 12627677 + Gm25470 miRNA miRNA MGP_LPJ_T0008594.1 MGP_LPJ_G0006948.1 mouse_genomes_project 6 47289535 47307599 - Gm44696 lincRNA lincRNA MGP_LPJ_T0100873.1 MGP_LPJ_G0039136.1 mouse_genomes_project 6 18532292 18532423 - Gm23960 snoRNA snoRNA MGP_LPJ_T0015187.1 MGP_LPJ_G0013278.1 mouse_genomes_project 6 3592431 3593497 - processed_pseudogene processed_pseudogene MGP_LPJ_T0078254.1 MGP_LPJ_G0030852.1 mouse_genomes_project 6 86609203 86613577 - MGP_LPJ_P0078254 Pradc1 protein_coding protein_coding MGP_LPJ_T0078255.1 MGP_LPJ_G0030852.1 mouse_genomes_project 6 86609434 86613599 - Pradc1 protein_coding retained_intron MGP_LPJ_T0078256.1 MGP_LPJ_G0030852.1 mouse_genomes_project 6 86609435 86613646 - MGP_LPJ_P0078256 Pradc1 protein_coding protein_coding MGP_LPJ_T0078257.1 MGP_LPJ_G0030852.1 mouse_genomes_project 6 86609608 86614343 - Pradc1 protein_coding processed_transcript MGP_LPJ_T0078258.1 MGP_LPJ_G0030852.1 mouse_genomes_project 6 86609933 86613622 - Pradc1 protein_coding processed_transcript MGP_LPJ_T0078259.1 MGP_LPJ_G0030852.1 mouse_genomes_project 6 86609948 86613654 - Pradc1 protein_coding retained_intron MGP_LPJ_T0078260.1 MGP_LPJ_G0030852.1 mouse_genomes_project 6 86610080 86613611 - Pradc1 protein_coding processed_transcript MGP_LPJ_T0078462.1 MGP_LPJ_G0030896.1 mouse_genomes_project 6 89200869 89225242 - MGP_LPJ_P0078462 Isy1 protein_coding protein_coding MGP_LPJ_T0078463.1 MGP_LPJ_G0030896.1 mouse_genomes_project 6 89208108 89225182 - MGP_LPJ_P0078463 Isy1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078464.1 MGP_LPJ_G0030896.1 mouse_genomes_project 6 89208178 89209155 - Isy1 protein_coding retained_intron MGP_LPJ_T0078465.1 MGP_LPJ_G0030896.1 mouse_genomes_project 6 89208992 89225144 - MGP_LPJ_P0078465 Isy1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078466.1 MGP_LPJ_G0030896.1 mouse_genomes_project 6 89211856 89225200 - Isy1 protein_coding retained_intron MGP_LPJ_T0078467.1 MGP_LPJ_G0030896.1 mouse_genomes_project 6 89213630 89225157 - Isy1 protein_coding retained_intron MGP_LPJ_T0078468.1 MGP_LPJ_G0030896.1 mouse_genomes_project 6 89214235 89225191 - MGP_LPJ_P0078468 Isy1 protein_coding protein_coding MGP_LPJ_T0078469.1 MGP_LPJ_G0030896.1 mouse_genomes_project 6 89219993 89225200 - Isy1 protein_coding retained_intron MGP_LPJ_T0008689.1 MGP_LPJ_G0007022.1 mouse_genomes_project 6 91987160 91988381 + Gm44421 lincRNA lincRNA MGP_LPJ_T0077855.1 MGP_LPJ_G0030773.1 mouse_genomes_project 6 72824954 72828289 - MGP_LPJ_P0077855 Vamp5 protein_coding protein_coding MGP_LPJ_T0077856.1 MGP_LPJ_G0030773.1 mouse_genomes_project 6 72825188 72837310 - MGP_LPJ_P0077856 Vamp5 protein_coding protein_coding MGP_LPJ_T0077857.1 MGP_LPJ_G0030773.1 mouse_genomes_project 6 72825194 72837356 - MGP_LPJ_P0077857 Vamp5 protein_coding protein_coding MGP_LPJ_T0077383.1 MGP_LPJ_G0030656.1 mouse_genomes_project 6 51958720 52016499 + MGP_LPJ_P0077383 Tax1bp1 protein_coding protein_coding MGP_LPJ_T0077384.1 MGP_LPJ_G0030656.1 mouse_genomes_project 6 51958741 51980119 + MGP_LPJ_P0077384 Tax1bp1 protein_coding protein_coding MGP_LPJ_T0077385.1 MGP_LPJ_G0030656.1 mouse_genomes_project 6 51958754 51978440 + Tax1bp1 protein_coding retained_intron MGP_LPJ_T0077386.1 MGP_LPJ_G0030656.1 mouse_genomes_project 6 51959210 51980153 + MGP_LPJ_P0077386 Tax1bp1 protein_coding protein_coding MGP_LPJ_T0077387.1 MGP_LPJ_G0030656.1 mouse_genomes_project 6 51959341 51974196 + MGP_LPJ_P0077387 Tax1bp1 protein_coding protein_coding MGP_LPJ_T0077388.1 MGP_LPJ_G0030656.1 mouse_genomes_project 6 51989528 51991456 + Tax1bp1 protein_coding processed_transcript MGP_LPJ_T0077389.1 MGP_LPJ_G0030656.1 mouse_genomes_project 6 52007266 52011999 + Tax1bp1 protein_coding retained_intron MGP_LPJ_T0011634.1 MGP_LPJ_G0009752.1 mouse_genomes_project 6 3735924 3736070 - Dlx6os1 misc_RNA misc_RNA MGP_LPJ_T0079654.1 MGP_LPJ_G0031119.1 mouse_genomes_project 6 124801219 124802733 + protein_coding retained_intron MGP_LPJ_T0079655.1 MGP_LPJ_G0031119.1 mouse_genomes_project 6 124802142 125132531 + protein_coding retained_intron MGP_LPJ_T0079656.1 MGP_LPJ_G0031119.1 mouse_genomes_project 6 124858580 124861607 + protein_coding retained_intron MGP_LPJ_T0015395.1 MGP_LPJ_G0013486.1 mouse_genomes_project 6 73495587 73496173 - processed_pseudogene processed_pseudogene MGP_LPJ_T0078176.1 MGP_LPJ_G0030841.1 mouse_genomes_project 6 84912328 84973234 + MGP_LPJ_P0078176 Zfp638 protein_coding protein_coding MGP_LPJ_T0078177.1 MGP_LPJ_G0030841.1 mouse_genomes_project 6 84912329 84990591 + MGP_LPJ_P0078177 Zfp638 protein_coding nonsense_mediated_decay MGP_LPJ_T0078178.1 MGP_LPJ_G0030841.1 mouse_genomes_project 6 84958529 85038066 + MGP_LPJ_P0078178 Zfp638 protein_coding protein_coding MGP_LPJ_T0078179.1 MGP_LPJ_G0030841.1 mouse_genomes_project 6 84958533 84975955 + Zfp638 protein_coding retained_intron MGP_LPJ_T0078180.1 MGP_LPJ_G0030841.1 mouse_genomes_project 6 84958533 84990567 + Zfp638 protein_coding processed_transcript MGP_LPJ_T0078181.1 MGP_LPJ_G0030841.1 mouse_genomes_project 6 84958535 85004179 + MGP_LPJ_P0078181 Zfp638 protein_coding protein_coding MGP_LPJ_T0078182.1 MGP_LPJ_G0030841.1 mouse_genomes_project 6 84958536 85013166 + MGP_LPJ_P0078182 Zfp638 protein_coding protein_coding MGP_LPJ_T0078183.1 MGP_LPJ_G0030841.1 mouse_genomes_project 6 84958552 85035405 + MGP_LPJ_P0078183 Zfp638 protein_coding protein_coding MGP_LPJ_T0078184.1 MGP_LPJ_G0030841.1 mouse_genomes_project 6 84958552 85035407 + MGP_LPJ_P0078184 Zfp638 protein_coding protein_coding MGP_LPJ_T0078185.1 MGP_LPJ_G0030841.1 mouse_genomes_project 6 84958554 85035185 + MGP_LPJ_P0078185 Zfp638 protein_coding protein_coding MGP_LPJ_T0078186.1 MGP_LPJ_G0030841.1 mouse_genomes_project 6 84958557 84960059 + Zfp638 protein_coding retained_intron MGP_LPJ_T0078187.1 MGP_LPJ_G0030841.1 mouse_genomes_project 6 84958559 84990603 + Zfp638 protein_coding processed_transcript MGP_LPJ_T0078188.1 MGP_LPJ_G0030841.1 mouse_genomes_project 6 84972966 85035159 + MGP_LPJ_P0078188 Zfp638 protein_coding protein_coding MGP_LPJ_T0078189.1 MGP_LPJ_G0030841.1 mouse_genomes_project 6 84972966 85035407 + MGP_LPJ_P0078189 Zfp638 protein_coding protein_coding MGP_LPJ_T0078190.1 MGP_LPJ_G0030841.1 mouse_genomes_project 6 84990209 84992289 + Zfp638 protein_coding retained_intron MGP_LPJ_T0078191.1 MGP_LPJ_G0030841.1 mouse_genomes_project 6 84995467 85016863 + MGP_LPJ_P0078191 Zfp638 protein_coding protein_coding MGP_LPJ_T0078192.1 MGP_LPJ_G0030841.1 mouse_genomes_project 6 85009487 85014478 + Zfp638 protein_coding retained_intron MGP_LPJ_T0078193.1 MGP_LPJ_G0030841.1 mouse_genomes_project 6 85013221 85015450 + Zfp638 protein_coding retained_intron MGP_LPJ_T0078194.1 MGP_LPJ_G0030841.1 mouse_genomes_project 6 85028145 85030373 + Zfp638 protein_coding retained_intron MGP_LPJ_T0078195.1 MGP_LPJ_G0030841.1 mouse_genomes_project 6 85032137 85035405 + Zfp638 protein_coding retained_intron MGP_LPJ_T0078196.1 MGP_LPJ_G0030841.1 mouse_genomes_project 6 85032137 85035109 + Zfp638 protein_coding retained_intron MGP_LPJ_T0078197.1 MGP_LPJ_G0030841.1 mouse_genomes_project 6 85032889 85035153 + Zfp638 protein_coding retained_intron MGP_LPJ_T0080804.1 MGP_LPJ_G0031398.1 mouse_genomes_project 6 151961993 151987927 + MGP_LPJ_P0080804 Smco2 protein_coding protein_coding MGP_LPJ_T0080805.1 MGP_LPJ_G0031398.1 mouse_genomes_project 6 151962046 151969438 + Smco2 protein_coding retained_intron MGP_LPJ_T0080806.1 MGP_LPJ_G0031398.1 mouse_genomes_project 6 151970123 151977176 + Smco2 protein_coding processed_transcript MGP_LPJ_T0080807.1 MGP_LPJ_G0031398.1 mouse_genomes_project 6 151974925 151982823 + Smco2 protein_coding processed_transcript MGP_LPJ_T0079341.1 MGP_LPJ_G0031064.1 mouse_genomes_project 6 118958528 119003394 + MGP_LPJ_P0079341 Zfand4 protein_coding protein_coding MGP_LPJ_T0099642.1 MGP_LPJ_G0037905.1 mouse_genomes_project 6 33486950 33487106 + Gm23435 snRNA snRNA MGP_LPJ_T0011631.1 MGP_LPJ_G0009749.1 mouse_genomes_project 6 1124222 1124549 + Gm24442 misc_RNA misc_RNA MGP_LPJ_T0005059.1 MGP_LPJ_G0004323.1 mouse_genomes_project 6 92700991 92701535 - Gm14573 antisense antisense MGP_LPJ_T0102277.1 MGP_LPJ_G0040314.1 mouse_genomes_project 6 137250003 137250906 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008806.1 MGP_LPJ_G0007112.1 mouse_genomes_project 6 154459065 154475454 - 1700003I16Rik lincRNA lincRNA MGP_LPJ_T0004928.1 MGP_LPJ_G0004234.1 mouse_genomes_project 6 14366473 14489585 - Gm4876 antisense antisense MGP_LPJ_T0004929.1 MGP_LPJ_G0004234.1 mouse_genomes_project 6 14383146 14489929 - Gm4876 antisense antisense MGP_LPJ_T0004930.1 MGP_LPJ_G0004234.1 mouse_genomes_project 6 14407304 14489561 - Gm4876 antisense antisense MGP_LPJ_T0004931.1 MGP_LPJ_G0004234.1 mouse_genomes_project 6 14420323 14489713 - Gm4876 antisense antisense MGP_LPJ_T0004932.1 MGP_LPJ_G0004234.1 mouse_genomes_project 6 14478654 14489842 - Gm4876 antisense antisense MGP_LPJ_T0004933.1 MGP_LPJ_G0004234.1 mouse_genomes_project 6 14489484 14489906 - Gm4876 antisense antisense MGP_LPJ_T0002594.1 MGP_LPJ_G0002491.1 mouse_genomes_project 6 40060038 40060089 + MGP_LPJ_P0002594 Trbj2-2 TR_J_gene TR_J_gene MGP_LPJ_T0078374.1 MGP_LPJ_G0030875.1 mouse_genomes_project 6 87964600 87966147 + MGP_LPJ_P0078374 Asprv1 protein_coding protein_coding MGP_LPJ_T0099676.1 MGP_LPJ_G0037939.1 mouse_genomes_project 6 123410869 123410971 + Gm24391 snRNA snRNA MGP_LPJ_T0077858.1 MGP_LPJ_G0030774.1 mouse_genomes_project 6 72842093 72849394 - MGP_LPJ_P0077858 Vamp8 protein_coding protein_coding MGP_LPJ_T0077859.1 MGP_LPJ_G0030774.1 mouse_genomes_project 6 72842098 72848602 - MGP_LPJ_P0077859 Vamp8 protein_coding protein_coding MGP_LPJ_T0076219.1 MGP_LPJ_G0030378.1 mouse_genomes_project 6 15368779 15421427 - MGP_LPJ_P0076219 Wnt2 protein_coding protein_coding MGP_LPJ_T0102235.1 MGP_LPJ_G0040272.1 mouse_genomes_project 6 57922734 57923649 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0076937.1 MGP_LPJ_G0030523.1 mouse_genomes_project 6 39386282 39396611 - MGP_LPJ_P0076937 Prss58 protein_coding protein_coding MGP_LPJ_T0079408.1 MGP_LPJ_G0031078.1 mouse_genomes_project 6 120647656 120674567 + MGP_LPJ_P0079408 protein_coding protein_coding MGP_LPJ_T0079409.1 MGP_LPJ_G0031078.1 mouse_genomes_project 6 120654112 120674516 + MGP_LPJ_P0079409 protein_coding protein_coding MGP_LPJ_T0079410.1 MGP_LPJ_G0031078.1 mouse_genomes_project 6 120654149 120674828 + MGP_LPJ_P0079410 protein_coding protein_coding MGP_LPJ_T0079411.1 MGP_LPJ_G0031078.1 mouse_genomes_project 6 120665917 120674828 + MGP_LPJ_P0079411 protein_coding protein_coding MGP_LPJ_T0011679.1 MGP_LPJ_G0009797.1 mouse_genomes_project 6 114482697 114483012 + Gm26362 misc_RNA misc_RNA MGP_LPJ_T0015604.1 MGP_LPJ_G0013695.1 mouse_genomes_project 6 141035044 141042372 - processed_pseudogene processed_pseudogene MGP_LPJ_T0078959.1 MGP_LPJ_G0030998.1 mouse_genomes_project 6 110438491 110518271 - MGP_LPJ_P0078959 Sumf1 protein_coding protein_coding MGP_LPJ_T0078960.1 MGP_LPJ_G0030998.1 mouse_genomes_project 6 110439810 110457995 - Sumf1 protein_coding processed_transcript MGP_LPJ_T0078961.1 MGP_LPJ_G0030998.1 mouse_genomes_project 6 110439939 110518245 - MGP_LPJ_P0078961 Sumf1 protein_coding protein_coding MGP_LPJ_T0078962.1 MGP_LPJ_G0030998.1 mouse_genomes_project 6 110439939 110518245 - MGP_LPJ_P0078962 Sumf1 protein_coding protein_coding MGP_LPJ_T0078963.1 MGP_LPJ_G0030998.1 mouse_genomes_project 6 110449630 110477808 - MGP_LPJ_P0078963 Sumf1 protein_coding protein_coding MGP_LPJ_T0078964.1 MGP_LPJ_G0030998.1 mouse_genomes_project 6 110477425 110485252 - Sumf1 protein_coding retained_intron MGP_LPJ_T0080302.1 MGP_LPJ_G0031289.1 mouse_genomes_project 6 137006412 137007446 - MGP_LPJ_P0080302 Tas2r115 protein_coding protein_coding MGP_LPJ_T0078034.1 MGP_LPJ_G0030812.1 mouse_genomes_project 6 84065915 84067817 - MGP_LPJ_P0078034 Tlx2 protein_coding protein_coding MGP_LPJ_T0078035.1 MGP_LPJ_G0030812.1 mouse_genomes_project 6 84066182 84067885 - MGP_LPJ_P0078035 Tlx2 protein_coding protein_coding MGP_LPJ_T0015565.1 MGP_LPJ_G0013656.1 mouse_genomes_project 6 132424469 132424959 - processed_pseudogene processed_pseudogene MGP_LPJ_T0080082.1 MGP_LPJ_G0031210.1 mouse_genomes_project 6 130669691 130678142 + MGP_LPJ_P0080082 Fgf23 protein_coding protein_coding MGP_LPJ_T0010794.1 MGP_LPJ_G0008912.1 mouse_genomes_project 6 70356491 70356601 - Gm24096 miRNA miRNA MGP_LPJ_T0100934.1 MGP_LPJ_G0039197.1 mouse_genomes_project 6 128760767 128760896 - Gm24175 snoRNA snoRNA MGP_LPJ_T0076554.1 MGP_LPJ_G0030444.1 mouse_genomes_project 6 28568665 28592724 + MGP_LPJ_P0076554 Cpa2 protein_coding protein_coding MGP_LPJ_T0076555.1 MGP_LPJ_G0030444.1 mouse_genomes_project 6 28568725 28571556 + Cpa2 protein_coding retained_intron MGP_LPJ_T0076556.1 MGP_LPJ_G0030444.1 mouse_genomes_project 6 28568753 28574194 + Cpa2 protein_coding processed_transcript MGP_LPJ_T0076557.1 MGP_LPJ_G0030444.1 mouse_genomes_project 6 28570291 28572076 + Cpa2 protein_coding retained_intron MGP_LPJ_T0076558.1 MGP_LPJ_G0030444.1 mouse_genomes_project 6 28570999 28579550 + Cpa2 protein_coding retained_intron MGP_LPJ_T0076559.1 MGP_LPJ_G0030444.1 mouse_genomes_project 6 28571568 28576779 + Cpa2 protein_coding retained_intron MGP_LPJ_T0076560.1 MGP_LPJ_G0030444.1 mouse_genomes_project 6 28573725 28574239 + Cpa2 protein_coding processed_transcript MGP_LPJ_T0076561.1 MGP_LPJ_G0030444.1 mouse_genomes_project 6 28579396 28592496 + Cpa2 protein_coding retained_intron MGP_LPJ_T0010774.1 MGP_LPJ_G0008892.1 mouse_genomes_project 6 28154538 28154613 - Mir182 miRNA miRNA MGP_LPJ_T0015370.1 MGP_LPJ_G0013461.1 mouse_genomes_project 6 67731895 67732069 - processed_pseudogene processed_pseudogene MGP_LPJ_T0078336.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87720167 87756885 + MGP_LPJ_P0078336 Tia1 protein_coding protein_coding MGP_LPJ_T0078337.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87720167 87754681 + MGP_LPJ_P0078337 Tia1 protein_coding protein_coding MGP_LPJ_T0078338.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87720183 87721117 + Tia1 protein_coding retained_intron MGP_LPJ_T0078339.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87720230 87723073 + Tia1 protein_coding processed_transcript MGP_LPJ_T0078340.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87720239 87738712 + Tia1 protein_coding retained_intron MGP_LPJ_T0078341.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87720244 87740519 + Tia1 protein_coding processed_transcript MGP_LPJ_T0078342.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87720244 87749985 + MGP_LPJ_P0078342 Tia1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078343.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87720252 87754252 + Tia1 protein_coding retained_intron MGP_LPJ_T0078344.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87720261 87755665 + MGP_LPJ_P0078344 Tia1 protein_coding protein_coding MGP_LPJ_T0078345.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87720262 87754251 + MGP_LPJ_P0078345 Tia1 protein_coding protein_coding MGP_LPJ_T0078346.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87720265 87750040 + MGP_LPJ_P0078346 Tia1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078347.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87720271 87746094 + Tia1 protein_coding processed_transcript MGP_LPJ_T0078348.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87720273 87756707 + MGP_LPJ_P0078348 Tia1 protein_coding nonsense_mediated_decay MGP_LPJ_T0078349.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87720284 87740565 + Tia1 protein_coding retained_intron MGP_LPJ_T0078350.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87720284 87755660 + MGP_LPJ_P0078350 Tia1 protein_coding protein_coding MGP_LPJ_T0078351.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87720308 87740600 + Tia1 protein_coding retained_intron MGP_LPJ_T0078352.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87720421 87747517 + Tia1 protein_coding retained_intron MGP_LPJ_T0078353.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87734547 87742711 + Tia1 protein_coding retained_intron MGP_LPJ_T0078354.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87736511 87739175 + Tia1 protein_coding retained_intron MGP_LPJ_T0078355.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87739929 87745846 + Tia1 protein_coding processed_transcript MGP_LPJ_T0078356.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87740121 87747741 + Tia1 protein_coding processed_transcript MGP_LPJ_T0078357.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87740621 87746080 + Tia1 protein_coding retained_intron MGP_LPJ_T0078358.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87740653 87746654 + Tia1 protein_coding retained_intron MGP_LPJ_T0078359.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87740979 87750002 + Tia1 protein_coding retained_intron MGP_LPJ_T0078360.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87742705 87746865 + Tia1 protein_coding retained_intron MGP_LPJ_T0078361.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87746059 87747225 + Tia1 protein_coding retained_intron MGP_LPJ_T0078362.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87747231 87747931 + Tia1 protein_coding retained_intron MGP_LPJ_T0078363.1 MGP_LPJ_G0030871.1 mouse_genomes_project 6 87747706 87753783 + MGP_LPJ_P0078363 Tia1 protein_coding nonsense_mediated_decay MGP_LPJ_T0005103.1 MGP_LPJ_G0004354.1 mouse_genomes_project 6 128186297 128191805 - antisense antisense MGP_LPJ_T0099649.1 MGP_LPJ_G0037912.1 mouse_genomes_project 6 47159856 47160056 + Gm22122 snRNA snRNA MGP_LPJ_T0015499.1 MGP_LPJ_G0013590.1 mouse_genomes_project 6 115907077 115909525 - processed_pseudogene processed_pseudogene MGP_LPJ_T0080493.1 MGP_LPJ_G0031343.1 mouse_genomes_project 6 142439406 142468686 + Dera protein_coding retained_intron MGP_LPJ_T0080494.1 MGP_LPJ_G0031343.1 mouse_genomes_project 6 142439406 142447477 + Dera protein_coding processed_transcript MGP_LPJ_T0080495.1 MGP_LPJ_G0031343.1 mouse_genomes_project 6 142439416 142523609 + MGP_LPJ_P0080495 Dera protein_coding protein_coding MGP_LPJ_T0080496.1 MGP_LPJ_G0031343.1 mouse_genomes_project 6 142439418 142524052 + MGP_LPJ_P0080496 Dera protein_coding protein_coding MGP_LPJ_T0080497.1 MGP_LPJ_G0031343.1 mouse_genomes_project 6 142439436 142550463 + MGP_LPJ_P0080497 Dera protein_coding protein_coding MGP_LPJ_T0080498.1 MGP_LPJ_G0031343.1 mouse_genomes_project 6 142439451 142450663 + Dera protein_coding processed_transcript MGP_LPJ_T0080499.1 MGP_LPJ_G0031343.1 mouse_genomes_project 6 142439475 142523588 + MGP_LPJ_P0080499 Dera protein_coding protein_coding MGP_LPJ_T0080500.1 MGP_LPJ_G0031343.1 mouse_genomes_project 6 142447180 142447478 + Dera protein_coding TEC MGP_LPJ_T0080501.1 MGP_LPJ_G0031343.1 mouse_genomes_project 6 142458732 142469515 + Dera protein_coding processed_transcript MGP_LPJ_T0080502.1 MGP_LPJ_G0031343.1 mouse_genomes_project 6 142464350 142466018 + Dera protein_coding retained_intron MGP_LPJ_T0080503.1 MGP_LPJ_G0031343.1 mouse_genomes_project 6 142467191 142523635 + MGP_LPJ_P0080503 Dera protein_coding protein_coding MGP_LPJ_T0080504.1 MGP_LPJ_G0031343.1 mouse_genomes_project 6 142483936 142496623 + Dera protein_coding processed_transcript MGP_LPJ_T0080505.1 MGP_LPJ_G0031343.1 mouse_genomes_project 6 142516714 142549935 + MGP_LPJ_P0080505 Dera protein_coding protein_coding MGP_LPJ_T0080506.1 MGP_LPJ_G0031343.1 mouse_genomes_project 6 142521790 142524238 + Dera protein_coding retained_intron MGP_LPJ_T0080507.1 MGP_LPJ_G0031343.1 mouse_genomes_project 6 142523002 142535123 + MGP_LPJ_P0080507 Dera protein_coding protein_coding MGP_LPJ_T0080233.1 MGP_LPJ_G0031252.1 mouse_genomes_project 6 133484157 133490851 + MGP_LPJ_P0080233 Klrd1 protein_coding protein_coding MGP_LPJ_T0080234.1 MGP_LPJ_G0031252.1 mouse_genomes_project 6 133484172 133490698 + MGP_LPJ_P0080234 Klrd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0080235.1 MGP_LPJ_G0031252.1 mouse_genomes_project 6 133484178 133490554 + MGP_LPJ_P0080235 Klrd1 protein_coding protein_coding MGP_LPJ_T0080236.1 MGP_LPJ_G0031252.1 mouse_genomes_project 6 133487577 133490538 + MGP_LPJ_P0080236 Klrd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0080237.1 MGP_LPJ_G0031252.1 mouse_genomes_project 6 133488630 133490537 + Klrd1 protein_coding retained_intron MGP_LPJ_T0077216.1 MGP_LPJ_G0030614.1 mouse_genomes_project 6 47686525 47697892 + MGP_LPJ_P0077216 Gimap5 protein_coding protein_coding MGP_LPJ_T0077217.1 MGP_LPJ_G0030614.1 mouse_genomes_project 6 47686526 47687814 + Gimap5 protein_coding processed_transcript MGP_LPJ_T0077218.1 MGP_LPJ_G0030614.1 mouse_genomes_project 6 47686527 47687841 + Gimap5 protein_coding processed_transcript MGP_LPJ_T0077219.1 MGP_LPJ_G0030614.1 mouse_genomes_project 6 47686627 47688955 + Gimap5 protein_coding retained_intron MGP_LPJ_T0080309.1 MGP_LPJ_G0031296.1 mouse_genomes_project 6 137126911 137127876 - MGP_LPJ_P0080309 Tas2r129 protein_coding protein_coding MGP_LPJ_T0015238.1 MGP_LPJ_G0013329.1 mouse_genomes_project 6 27939134 27940287 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015461.1 MGP_LPJ_G0013552.1 mouse_genomes_project 6 99793591 99793843 - processed_pseudogene processed_pseudogene MGP_LPJ_T0076734.1 MGP_LPJ_G0030474.1 mouse_genomes_project 6 33418914 33490952 + MGP_LPJ_P0076734 Nup205 protein_coding protein_coding MGP_LPJ_T0076735.1 MGP_LPJ_G0030474.1 mouse_genomes_project 6 33418923 33490952 + MGP_LPJ_P0076735 Nup205 protein_coding protein_coding MGP_LPJ_T0076736.1 MGP_LPJ_G0030474.1 mouse_genomes_project 6 33419109 33448159 + Nup205 protein_coding retained_intron MGP_LPJ_T0076737.1 MGP_LPJ_G0030474.1 mouse_genomes_project 6 33419122 33490946 + MGP_LPJ_P0076737 Nup205 protein_coding protein_coding MGP_LPJ_T0076738.1 MGP_LPJ_G0030474.1 mouse_genomes_project 6 33447552 33490952 + Nup205 protein_coding processed_transcript MGP_LPJ_T0076739.1 MGP_LPJ_G0030474.1 mouse_genomes_project 6 33467103 33481525 + Nup205 protein_coding retained_intron MGP_LPJ_T0076740.1 MGP_LPJ_G0030474.1 mouse_genomes_project 6 33488529 33489828 + Nup205 protein_coding retained_intron MGP_LPJ_T0079813.1 MGP_LPJ_G0031161.1 mouse_genomes_project 6 128217809 128219321 - Grcc10 protein_coding processed_transcript MGP_LPJ_T0079814.1 MGP_LPJ_G0031161.1 mouse_genomes_project 6 128217809 128220000 - MGP_LPJ_P0079814 Grcc10 protein_coding protein_coding MGP_LPJ_T0079815.1 MGP_LPJ_G0031161.1 mouse_genomes_project 6 128217812 128219691 - Grcc10 protein_coding retained_intron MGP_LPJ_T0079816.1 MGP_LPJ_G0031161.1 mouse_genomes_project 6 128217813 128219341 - Grcc10 protein_coding retained_intron MGP_LPJ_T0077684.1 MGP_LPJ_G0030739.1 mouse_genomes_project 6 66638184 66710650 - MGP_LPJ_P0077684 protein_coding protein_coding MGP_LPJ_T0077365.1 MGP_LPJ_G0030651.1 mouse_genomes_project 6 51451056 51454798 - MGP_LPJ_P0077365 Hoxa10 protein_coding protein_coding MGP_LPJ_T0077366.1 MGP_LPJ_G0030651.1 mouse_genomes_project 6 51451058 51453183 - Hoxa10 protein_coding processed_transcript MGP_LPJ_T0077367.1 MGP_LPJ_G0030651.1 mouse_genomes_project 6 51451780 51460712 - MGP_LPJ_P0077367 Hoxa10 protein_coding protein_coding MGP_LPJ_T0077368.1 MGP_LPJ_G0030651.1 mouse_genomes_project 6 51451940 51460653 - Hoxa10 protein_coding processed_transcript MGP_LPJ_T0078171.1 MGP_LPJ_G0030840.1 mouse_genomes_project 6 84846900 84873799 - MGP_LPJ_P0078171 Paip2b protein_coding protein_coding MGP_LPJ_T0078172.1 MGP_LPJ_G0030840.1 mouse_genomes_project 6 84849142 84850682 - Paip2b protein_coding retained_intron MGP_LPJ_T0078173.1 MGP_LPJ_G0030840.1 mouse_genomes_project 6 84850195 84873771 - Paip2b protein_coding retained_intron MGP_LPJ_T0078174.1 MGP_LPJ_G0030840.1 mouse_genomes_project 6 84854815 84873771 - Paip2b protein_coding retained_intron MGP_LPJ_T0078175.1 MGP_LPJ_G0030840.1 mouse_genomes_project 6 84873514 84873758 - Paip2b protein_coding retained_intron MGP_LPJ_T0015387.1 MGP_LPJ_G0013478.1 mouse_genomes_project 6 70723621 70724962 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015346.1 MGP_LPJ_G0013437.1 mouse_genomes_project 6 65280519 65282308 + processed_pseudogene processed_pseudogene MGP_LPJ_T0080173.1 MGP_LPJ_G0031232.1 mouse_genomes_project 6 132442954 132465060 + MGP_LPJ_P0080173 Clec2h protein_coding protein_coding MGP_LPJ_T0080174.1 MGP_LPJ_G0031232.1 mouse_genomes_project 6 132442955 132462666 + MGP_LPJ_P0080174 Clec2h protein_coding nonsense_mediated_decay MGP_LPJ_T0080175.1 MGP_LPJ_G0031232.1 mouse_genomes_project 6 132442956 132462457 + MGP_LPJ_P0080175 Clec2h protein_coding protein_coding MGP_LPJ_T0080176.1 MGP_LPJ_G0031232.1 mouse_genomes_project 6 132442960 132462659 + Clec2h protein_coding retained_intron MGP_LPJ_T0015422.1 MGP_LPJ_G0013513.1 mouse_genomes_project 6 84941121 84941485 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015447.1 MGP_LPJ_G0013538.1 mouse_genomes_project 6 94166025 94167022 + processed_pseudogene processed_pseudogene MGP_LPJ_T0079007.1 MGP_LPJ_G0031009.1 mouse_genomes_project 6 115228390 115470702 - MGP_LPJ_P0079007 Srgap3 protein_coding protein_coding MGP_LPJ_T0079008.1 MGP_LPJ_G0031009.1 mouse_genomes_project 6 115228393 115470190 - MGP_LPJ_P0079008 Srgap3 protein_coding protein_coding MGP_LPJ_T0079009.1 MGP_LPJ_G0031009.1 mouse_genomes_project 6 115249398 115277488 - MGP_LPJ_P0079009 Srgap3 protein_coding nonsense_mediated_decay MGP_LPJ_T0079010.1 MGP_LPJ_G0031009.1 mouse_genomes_project 6 115277114 115470702 - Srgap3 protein_coding retained_intron MGP_LPJ_T0079011.1 MGP_LPJ_G0031009.1 mouse_genomes_project 6 115305768 115339365 - Srgap3 protein_coding retained_intron MGP_LPJ_T0077551.1 MGP_LPJ_G0030701.1 mouse_genomes_project 6 56879460 56880515 + MGP_LPJ_P0077551 Vmn1r27 protein_coding protein_coding MGP_LPJ_T0015288.1 MGP_LPJ_G0013379.1 mouse_genomes_project 6 47925785 47927031 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099667.1 MGP_LPJ_G0037930.1 mouse_genomes_project 6 105029354 105029462 + Gm26022 snRNA snRNA MGP_LPJ_T0080008.1 MGP_LPJ_G0031192.1 mouse_genomes_project 6 128782913 128791809 - MGP_LPJ_P0080008 Tuba3a protein_coding protein_coding MGP_LPJ_T0080530.1 MGP_LPJ_G0031347.1 mouse_genomes_project 6 143390948 143392404 - MGP_LPJ_P0080530 Igbp1b protein_coding protein_coding MGP_LPJ_T0015239.1 MGP_LPJ_G0013330.1 mouse_genomes_project 6 27941783 27941990 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102236.1 MGP_LPJ_G0040273.1 mouse_genomes_project 6 57985492 57986417 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0075925.1 MGP_LPJ_G0030324.1 mouse_genomes_project 6 81665 120085 - MGP_LPJ_P0075925 Samd9l protein_coding protein_coding MGP_LPJ_T0075926.1 MGP_LPJ_G0030324.1 mouse_genomes_project 6 86358 96362 - MGP_LPJ_P0075926 Samd9l protein_coding protein_coding MGP_LPJ_T0004927.1 MGP_LPJ_G0004233.1 mouse_genomes_project 6 5321610 5346235 - Gm16043 antisense antisense MGP_LPJ_T0015270.1 MGP_LPJ_G0013361.1 mouse_genomes_project 6 42396517 42397263 - processed_pseudogene processed_pseudogene MGP_LPJ_T0079327.1 MGP_LPJ_G0031062.1 mouse_genomes_project 6 118876208 118934836 + MGP_LPJ_P0079327 Fam21 protein_coding protein_coding MGP_LPJ_T0079328.1 MGP_LPJ_G0031062.1 mouse_genomes_project 6 118876216 118927191 + MGP_LPJ_P0079328 Fam21 protein_coding protein_coding MGP_LPJ_T0079329.1 MGP_LPJ_G0031062.1 mouse_genomes_project 6 118876226 118889531 + MGP_LPJ_P0079329 Fam21 protein_coding nonsense_mediated_decay MGP_LPJ_T0079330.1 MGP_LPJ_G0031062.1 mouse_genomes_project 6 118876265 118877493 + Fam21 protein_coding retained_intron MGP_LPJ_T0079331.1 MGP_LPJ_G0031062.1 mouse_genomes_project 6 118876292 118882952 + MGP_LPJ_P0079331 Fam21 protein_coding protein_coding MGP_LPJ_T0079332.1 MGP_LPJ_G0031062.1 mouse_genomes_project 6 118876307 118885132 + MGP_LPJ_P0079332 Fam21 protein_coding nonsense_mediated_decay MGP_LPJ_T0079333.1 MGP_LPJ_G0031062.1 mouse_genomes_project 6 118876376 118934815 + Fam21 protein_coding retained_intron MGP_LPJ_T0079334.1 MGP_LPJ_G0031062.1 mouse_genomes_project 6 118876686 118931102 + MGP_LPJ_P0079334 Fam21 protein_coding protein_coding MGP_LPJ_T0079335.1 MGP_LPJ_G0031062.1 mouse_genomes_project 6 118889535 118893956 + Fam21 protein_coding retained_intron MGP_LPJ_T0079336.1 MGP_LPJ_G0031062.1 mouse_genomes_project 6 118890862 118896969 + MGP_LPJ_P0079336 Fam21 protein_coding protein_coding MGP_LPJ_T0079337.1 MGP_LPJ_G0031062.1 mouse_genomes_project 6 118895511 118899361 + Fam21 protein_coding retained_intron MGP_LPJ_T0079338.1 MGP_LPJ_G0031062.1 mouse_genomes_project 6 118927924 118928947 + Fam21 protein_coding retained_intron MGP_LPJ_T0079339.1 MGP_LPJ_G0031062.1 mouse_genomes_project 6 118928674 118931087 + Fam21 protein_coding retained_intron MGP_LPJ_T0015283.1 MGP_LPJ_G0013374.1 mouse_genomes_project 6 47293380 47294251 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011661.1 MGP_LPJ_G0009779.1 mouse_genomes_project 6 51467284 51467517 + Gm27817 misc_RNA misc_RNA MGP_LPJ_T0000363.1 MGP_LPJ_G0000301.1 mouse_genomes_project 6 70781911 70853063 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0015494.1 MGP_LPJ_G0013585.1 mouse_genomes_project 6 114898879 114899347 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008667.1 MGP_LPJ_G0007006.1 mouse_genomes_project 6 85635570 85636016 + 4930504D19Rik lincRNA lincRNA MGP_LPJ_T0101375.1 MGP_LPJ_G0039570.1 mouse_genomes_project 6 32632020 32652583 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101376.1 MGP_LPJ_G0039570.1 mouse_genomes_project 6 32632181 32648221 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101377.1 MGP_LPJ_G0039570.1 mouse_genomes_project 6 32648189 32648362 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0101378.1 MGP_LPJ_G0039570.1 mouse_genomes_project 6 32648629 32652584 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0079553.1 MGP_LPJ_G0031099.1 mouse_genomes_project 6 123161866 123162935 + MGP_LPJ_P0079553 D330020A13Rik protein_coding protein_coding MGP_LPJ_T0076329.1 MGP_LPJ_G0030406.1 mouse_genomes_project 6 22580936 22616394 + MGP_LPJ_P0076329 Hyal5 protein_coding protein_coding MGP_LPJ_T0076330.1 MGP_LPJ_G0030406.1 mouse_genomes_project 6 22602737 22616241 + MGP_LPJ_P0076330 Hyal5 protein_coding protein_coding MGP_LPJ_T0076331.1 MGP_LPJ_G0030406.1 mouse_genomes_project 6 22614972 22616181 + Hyal5 protein_coding processed_transcript MGP_LPJ_T0077052.1 MGP_LPJ_G0030570.1 mouse_genomes_project 6 41428055 41428988 + MGP_LPJ_P0077052 Olfr447 protein_coding protein_coding MGP_LPJ_T0008630.1 MGP_LPJ_G0006975.1 mouse_genomes_project 6 60183450 60183940 + Gm44410 lincRNA lincRNA MGP_LPJ_T0075932.1 MGP_LPJ_G0030326.1 mouse_genomes_project 6 228022 332321 + MGP_LPJ_P0075932 Vps50 protein_coding protein_coding MGP_LPJ_T0075933.1 MGP_LPJ_G0030326.1 mouse_genomes_project 6 228044 329900 + MGP_LPJ_P0075933 Vps50 protein_coding protein_coding MGP_LPJ_T0075934.1 MGP_LPJ_G0030326.1 mouse_genomes_project 6 228062 332105 + MGP_LPJ_P0075934 Vps50 protein_coding protein_coding MGP_LPJ_T0075935.1 MGP_LPJ_G0030326.1 mouse_genomes_project 6 228066 256720 + Vps50 protein_coding retained_intron MGP_LPJ_T0075936.1 MGP_LPJ_G0030326.1 mouse_genomes_project 6 248273 268231 + Vps50 protein_coding processed_transcript MGP_LPJ_T0075937.1 MGP_LPJ_G0030326.1 mouse_genomes_project 6 293869 332105 + Vps50 protein_coding retained_intron MGP_LPJ_T0075938.1 MGP_LPJ_G0030326.1 mouse_genomes_project 6 305438 332105 + Vps50 protein_coding processed_transcript MGP_LPJ_T0075939.1 MGP_LPJ_G0030326.1 mouse_genomes_project 6 316856 321863 + Vps50 protein_coding retained_intron MGP_LPJ_T0075940.1 MGP_LPJ_G0030326.1 mouse_genomes_project 6 322823 329052 + Vps50 protein_coding processed_transcript MGP_LPJ_T0004926.1 MGP_LPJ_G0004232.1 mouse_genomes_project 6 5246900 5257806 - Gm16055 antisense antisense MGP_LPJ_T0008568.1 MGP_LPJ_G0006933.1 mouse_genomes_project 6 30891947 30892606 - BC049739 lincRNA lincRNA MGP_LPJ_T0077465.1 MGP_LPJ_G0030671.1 mouse_genomes_project 6 54369891 54412396 + MGP_LPJ_P0077465 Gars protein_coding protein_coding MGP_LPJ_T0077466.1 MGP_LPJ_G0030671.1 mouse_genomes_project 6 54379942 54383451 + Gars protein_coding retained_intron MGP_LPJ_T0077467.1 MGP_LPJ_G0030671.1 mouse_genomes_project 6 54382579 54394286 + Gars protein_coding retained_intron MGP_LPJ_T0002055.1 MGP_LPJ_G0001965.1 mouse_genomes_project 6 78469385 78473421 - TEC TEC MGP_LPJ_T0002183.1 MGP_LPJ_G0002092.1 mouse_genomes_project 6 138428097 138429926 + TEC TEC MGP_LPJ_T0008697.1 MGP_LPJ_G0007029.1 mouse_genomes_project 6 100451531 100656211 - Gm44196 lincRNA lincRNA MGP_LPJ_T0008699.1 MGP_LPJ_G0007029.1 mouse_genomes_project 6 100620400 100656230 - Gm44196 lincRNA lincRNA MGP_LPJ_T0008700.1 MGP_LPJ_G0007029.1 mouse_genomes_project 6 100652385 100656260 - Gm44196 lincRNA lincRNA MGP_LPJ_T0079220.1 MGP_LPJ_G0031042.1 mouse_genomes_project 6 117465198 117481433 - Vgll4 protein_coding processed_transcript MGP_LPJ_T0079221.1 MGP_LPJ_G0031042.1 mouse_genomes_project 6 117465994 117530547 - MGP_LPJ_P0079221 Vgll4 protein_coding protein_coding MGP_LPJ_T0079222.1 MGP_LPJ_G0031042.1 mouse_genomes_project 6 117466761 117481346 - Vgll4 protein_coding processed_transcript MGP_LPJ_T0079223.1 MGP_LPJ_G0031042.1 mouse_genomes_project 6 117466761 117469328 - Vgll4 protein_coding processed_transcript MGP_LPJ_T0079224.1 MGP_LPJ_G0031042.1 mouse_genomes_project 6 117466891 117585604 - MGP_LPJ_P0079224 Vgll4 protein_coding protein_coding MGP_LPJ_T0079225.1 MGP_LPJ_G0031042.1 mouse_genomes_project 6 117467334 117586418 - MGP_LPJ_P0079225 Vgll4 protein_coding protein_coding MGP_LPJ_T0079226.1 MGP_LPJ_G0031042.1 mouse_genomes_project 6 117528779 117530542 - Vgll4 protein_coding retained_intron MGP_LPJ_T0015545.1 MGP_LPJ_G0013636.1 mouse_genomes_project 6 127343223 127344070 + processed_pseudogene processed_pseudogene MGP_LPJ_T0076284.1 MGP_LPJ_G0030391.1 mouse_genomes_project 6 20724767 20789505 - MGP_LPJ_P0076284 Aass protein_coding protein_coding MGP_LPJ_T0076285.1 MGP_LPJ_G0030391.1 mouse_genomes_project 6 20745735 20783415 - Aass protein_coding processed_transcript MGP_LPJ_T0076286.1 MGP_LPJ_G0030391.1 mouse_genomes_project 6 20745735 20783447 - MGP_LPJ_P0076286 Aass protein_coding protein_coding MGP_LPJ_T0076287.1 MGP_LPJ_G0030391.1 mouse_genomes_project 6 20764135 20789435 - Aass protein_coding processed_transcript MGP_LPJ_T0015519.1 MGP_LPJ_G0013610.1 mouse_genomes_project 6 121399807 121401407 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002193.1 MGP_LPJ_G0002102.1 mouse_genomes_project 6 143330032 143330532 + TEC TEC MGP_LPJ_T0008734.1 MGP_LPJ_G0007059.1 mouse_genomes_project 6 121077518 121085647 - Gm30498 lincRNA lincRNA MGP_LPJ_T0099656.1 MGP_LPJ_G0037919.1 mouse_genomes_project 6 71420924 71421079 - Gm23485 snRNA snRNA MGP_LPJ_T0008537.1 MGP_LPJ_G0006913.1 mouse_genomes_project 6 23672835 23723551 + Gm20756 lincRNA lincRNA MGP_LPJ_T0008538.1 MGP_LPJ_G0006913.1 mouse_genomes_project 6 23695728 23700557 + Gm20756 lincRNA lincRNA MGP_LPJ_T0098047.1 MGP_LPJ_G0036328.1 mouse_genomes_project 6 51449944 51450391 - pseudogene pseudogene MGP_LPJ_T0015583.1 MGP_LPJ_G0013674.1 mouse_genomes_project 6 135917942 135918055 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015571.1 MGP_LPJ_G0013662.1 mouse_genomes_project 6 134227182 134227294 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002185.1 MGP_LPJ_G0002094.1 mouse_genomes_project 6 138607215 138607911 - TEC TEC MGP_LPJ_T0015265.1 MGP_LPJ_G0013356.1 mouse_genomes_project 6 41019160 41019958 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015230.1 MGP_LPJ_G0013321.1 mouse_genomes_project 6 20444509 20445209 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015634.1 MGP_LPJ_G0013725.1 mouse_genomes_project 6 154661539 154661978 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011642.1 MGP_LPJ_G0009760.1 mouse_genomes_project 6 15048531 15048718 + Gm28008 misc_RNA misc_RNA MGP_LPJ_T0000206.1 MGP_LPJ_G0000155.1 mouse_genomes_project 6 69637203 69637681 - MGP_LPJ_P0000206 Igkv4-57-1 IG_V_gene IG_V_gene MGP_LPJ_T0076289.1 MGP_LPJ_G0030393.1 mouse_genomes_project 6 20936677 21531979 - MGP_LPJ_P0076289 Cadps2 protein_coding protein_coding MGP_LPJ_T0076290.1 MGP_LPJ_G0030393.1 mouse_genomes_project 6 20936677 21531752 - MGP_LPJ_P0076290 Cadps2 protein_coding protein_coding MGP_LPJ_T0076291.1 MGP_LPJ_G0030393.1 mouse_genomes_project 6 20936677 21531980 - MGP_LPJ_P0076291 Cadps2 protein_coding protein_coding MGP_LPJ_T0076292.1 MGP_LPJ_G0030393.1 mouse_genomes_project 6 20936727 21531784 - MGP_LPJ_P0076292 Cadps2 protein_coding protein_coding MGP_LPJ_T0076293.1 MGP_LPJ_G0030393.1 mouse_genomes_project 6 20936742 21531696 - MGP_LPJ_P0076293 Cadps2 protein_coding protein_coding MGP_LPJ_T0076294.1 MGP_LPJ_G0030393.1 mouse_genomes_project 6 20936743 21531783 - MGP_LPJ_P0076294 Cadps2 protein_coding protein_coding MGP_LPJ_T0076295.1 MGP_LPJ_G0030393.1 mouse_genomes_project 6 20936747 21032811 - Cadps2 protein_coding processed_transcript MGP_LPJ_T0076296.1 MGP_LPJ_G0030393.1 mouse_genomes_project 6 20937412 21276413 - MGP_LPJ_P0076296 Cadps2 protein_coding protein_coding MGP_LPJ_T0076297.1 MGP_LPJ_G0030393.1 mouse_genomes_project 6 20937412 21531702 - MGP_LPJ_P0076297 Cadps2 protein_coding protein_coding MGP_LPJ_T0076298.1 MGP_LPJ_G0030393.1 mouse_genomes_project 6 20937417 20990077 - Cadps2 protein_coding processed_transcript MGP_LPJ_T0076299.1 MGP_LPJ_G0030393.1 mouse_genomes_project 6 21090227 21531822 - MGP_LPJ_P0076299 Cadps2 protein_coding protein_coding MGP_LPJ_T0076300.1 MGP_LPJ_G0030393.1 mouse_genomes_project 6 21270697 21531859 - Cadps2 protein_coding retained_intron MGP_LPJ_T0076304.1 MGP_LPJ_G0030393.1 mouse_genomes_project 6 21375913 21531821 - Cadps2 protein_coding retained_intron MGP_LPJ_T0008644.1 MGP_LPJ_G0006988.1 mouse_genomes_project 6 71856779 71865302 + Gm44172 lincRNA lincRNA MGP_LPJ_T0002717.1 MGP_LPJ_G0002596.1 mouse_genomes_project 6 39669885 39670559 + MGP_LPJ_P0002717 Trbv19 TR_V_gene TR_V_gene MGP_LPJ_T0015195.1 MGP_LPJ_G0013286.1 mouse_genomes_project 6 5506811 5508058 - processed_pseudogene processed_pseudogene MGP_LPJ_T0077027.1 MGP_LPJ_G0030559.1 mouse_genomes_project 6 40981893 40991473 - MGP_LPJ_P0077027 Olfr456 protein_coding protein_coding MGP_LPJ_T0100890.1 MGP_LPJ_G0039153.1 mouse_genomes_project 6 55961588 55961720 - Gm24709 snoRNA snoRNA MGP_LPJ_T0102229.1 MGP_LPJ_G0040266.1 mouse_genomes_project 6 57473688 57473822 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0005138.1 MGP_LPJ_G0004383.1 mouse_genomes_project 6 146139636 146142572 - Gm28523 antisense antisense MGP_LPJ_T0075949.1 MGP_LPJ_G0030329.1 mouse_genomes_project 6 720229 723856 + MGP_LPJ_P0075949 Gngt1 protein_coding protein_coding MGP_LPJ_T0075950.1 MGP_LPJ_G0030329.1 mouse_genomes_project 6 720234 723322 + Gngt1 protein_coding retained_intron MGP_LPJ_T0102281.1 MGP_LPJ_G0040318.1 mouse_genomes_project 6 137360936 137361878 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0015520.1 MGP_LPJ_G0013611.1 mouse_genomes_project 6 122737139 122738023 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008648.1 MGP_LPJ_G0006992.1 mouse_genomes_project 6 73952077 73972407 - lincRNA lincRNA MGP_LPJ_T0015343.1 MGP_LPJ_G0013434.1 mouse_genomes_project 6 65137298 65137712 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015615.1 MGP_LPJ_G0013706.1 mouse_genomes_project 6 146019314 146019844 + processed_pseudogene processed_pseudogene MGP_LPJ_T0079365.1 MGP_LPJ_G0031067.1 mouse_genomes_project 6 119169494 119177941 + MGP_LPJ_P0079365 Olfr211 protein_coding protein_coding MGP_LPJ_T0079366.1 MGP_LPJ_G0031067.1 mouse_genomes_project 6 119177011 119177941 + MGP_LPJ_P0079366 Olfr211 protein_coding protein_coding MGP_LPJ_T0015405.1 MGP_LPJ_G0013496.1 mouse_genomes_project 6 78800273 78801293 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008794.1 MGP_LPJ_G0007103.1 mouse_genomes_project 6 152397934 152399201 - Gm15767 lincRNA lincRNA MGP_LPJ_T0008795.1 MGP_LPJ_G0007103.1 mouse_genomes_project 6 152398130 152399193 - Gm15767 lincRNA lincRNA MGP_LPJ_T0008666.1 MGP_LPJ_G0007005.1 mouse_genomes_project 6 85500050 85510936 - Gm10445 lincRNA lincRNA MGP_LPJ_T0076601.1 MGP_LPJ_G0030452.1 mouse_genomes_project 6 29043399 29046456 - MGP_LPJ_P0076601 Klf14 protein_coding protein_coding MGP_LPJ_T0011678.1 MGP_LPJ_G0009796.1 mouse_genomes_project 6 114114886 114115182 + Gm24005 misc_RNA misc_RNA MGP_LPJ_T0080918.1 MGP_LPJ_G0031416.1 mouse_genomes_project 6 154562540 154580463 + MGP_LPJ_P0080918 2810474O19Rik protein_coding protein_coding MGP_LPJ_T0080919.1 MGP_LPJ_G0031416.1 mouse_genomes_project 6 154562554 154589400 + MGP_LPJ_P0080919 2810474O19Rik protein_coding protein_coding MGP_LPJ_T0080920.1 MGP_LPJ_G0031416.1 mouse_genomes_project 6 154562582 154582769 + MGP_LPJ_P0080920 2810474O19Rik protein_coding protein_coding MGP_LPJ_T0080921.1 MGP_LPJ_G0031416.1 mouse_genomes_project 6 154562600 154588720 + MGP_LPJ_P0080921 2810474O19Rik protein_coding protein_coding MGP_LPJ_T0080922.1 MGP_LPJ_G0031416.1 mouse_genomes_project 6 154562600 154588720 + MGP_LPJ_P0080922 2810474O19Rik protein_coding protein_coding MGP_LPJ_T0080923.1 MGP_LPJ_G0031416.1 mouse_genomes_project 6 154562699 154563582 + 2810474O19Rik protein_coding retained_intron MGP_LPJ_T0080924.1 MGP_LPJ_G0031416.1 mouse_genomes_project 6 154562854 154579281 + MGP_LPJ_P0080924 2810474O19Rik protein_coding protein_coding MGP_LPJ_T0080925.1 MGP_LPJ_G0031416.1 mouse_genomes_project 6 154564542 154568214 + 2810474O19Rik protein_coding retained_intron MGP_LPJ_T0080926.1 MGP_LPJ_G0031416.1 mouse_genomes_project 6 154571181 154579759 + MGP_LPJ_P0080926 2810474O19Rik protein_coding protein_coding MGP_LPJ_T0080927.1 MGP_LPJ_G0031416.1 mouse_genomes_project 6 154578447 154579565 + MGP_LPJ_P0080927 2810474O19Rik protein_coding protein_coding MGP_LPJ_T0080928.1 MGP_LPJ_G0031416.1 mouse_genomes_project 6 154579249 154589395 + MGP_LPJ_P0080928 2810474O19Rik protein_coding protein_coding MGP_LPJ_T0079576.1 MGP_LPJ_G0031103.1 mouse_genomes_project 6 123371443 123376312 - MGP_LPJ_P0079576 Cecr6 protein_coding protein_coding MGP_LPJ_T0001993.1 MGP_LPJ_G0001903.1 mouse_genomes_project 6 44003035 44004440 + TEC TEC MGP_LPJ_T0010837.1 MGP_LPJ_G0008955.1 mouse_genomes_project 6 132823335 132823391 - Mir7649 miRNA miRNA MGP_LPJ_T0078496.1 MGP_LPJ_G0030900.1 mouse_genomes_project 6 89371867 89373084 - MGP_LPJ_P0078496 H1fx protein_coding protein_coding MGP_LPJ_T0008777.1 MGP_LPJ_G0007091.1 mouse_genomes_project 6 147933827 147935795 + A930014E10Rik lincRNA lincRNA MGP_LPJ_T0079367.1 MGP_LPJ_G0031068.1 mouse_genomes_project 6 119189275 119208209 + MGP_LPJ_P0079367 protein_coding protein_coding MGP_LPJ_T0079689.1 MGP_LPJ_G0031126.1 mouse_genomes_project 6 125826377 125851240 - MGP_LPJ_P0079689 Apobec1 protein_coding protein_coding MGP_LPJ_T0079690.1 MGP_LPJ_G0031126.1 mouse_genomes_project 6 125826384 125848921 - MGP_LPJ_P0079690 Apobec1 protein_coding protein_coding MGP_LPJ_T0079691.1 MGP_LPJ_G0031126.1 mouse_genomes_project 6 125826386 125851167 - MGP_LPJ_P0079691 Apobec1 protein_coding protein_coding MGP_LPJ_T0079692.1 MGP_LPJ_G0031126.1 mouse_genomes_project 6 125829863 125851183 - MGP_LPJ_P0079692 Apobec1 protein_coding protein_coding MGP_LPJ_T0079693.1 MGP_LPJ_G0031126.1 mouse_genomes_project 6 125829889 125849152 - MGP_LPJ_P0079693 Apobec1 protein_coding protein_coding MGP_LPJ_T0079694.1 MGP_LPJ_G0031126.1 mouse_genomes_project 6 125830071 125851125 - MGP_LPJ_P0079694 Apobec1 protein_coding protein_coding MGP_LPJ_T0079695.1 MGP_LPJ_G0031126.1 mouse_genomes_project 6 125836110 125851166 - MGP_LPJ_P0079695 Apobec1 protein_coding protein_coding MGP_LPJ_T0079696.1 MGP_LPJ_G0031126.1 mouse_genomes_project 6 125836843 125851160 - Apobec1 protein_coding retained_intron MGP_LPJ_T0079697.1 MGP_LPJ_G0031126.1 mouse_genomes_project 6 125845411 125849232 - Apobec1 protein_coding retained_intron MGP_LPJ_T0098656.1 MGP_LPJ_G0036926.1 mouse_genomes_project 6 116171885 116175938 + Gm44200 sense_intronic sense_intronic MGP_LPJ_T0077747.1 MGP_LPJ_G0030755.1 mouse_genomes_project 6 71721341 71736046 + MGP_LPJ_P0077747 Cd8b1 protein_coding protein_coding MGP_LPJ_T0002718.1 MGP_LPJ_G0002597.1 mouse_genomes_project 6 39679769 39680474 + MGP_LPJ_P0002718 Trbv20 TR_V_gene TR_V_gene MGP_LPJ_T0079465.1 MGP_LPJ_G0031088.1 mouse_genomes_project 6 121976963 122019057 + MGP_LPJ_P0079465 Dcp1b protein_coding protein_coding MGP_LPJ_T0079466.1 MGP_LPJ_G0031088.1 mouse_genomes_project 6 121976998 122017626 + MGP_LPJ_P0079466 Dcp1b protein_coding protein_coding MGP_LPJ_T0079467.1 MGP_LPJ_G0031088.1 mouse_genomes_project 6 121994024 122017647 + Dcp1b protein_coding retained_intron MGP_LPJ_T0079468.1 MGP_LPJ_G0031088.1 mouse_genomes_project 6 122002146 122012288 + Dcp1b protein_coding retained_intron MGP_LPJ_T0079469.1 MGP_LPJ_G0031088.1 mouse_genomes_project 6 122014984 122019055 + Dcp1b protein_coding retained_intron MGP_LPJ_T0002764.1 MGP_LPJ_G0002636.1 mouse_genomes_project 6 39743775 39744052 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0015189.1 MGP_LPJ_G0013280.1 mouse_genomes_project 6 4075419 4076364 + processed_pseudogene processed_pseudogene MGP_LPJ_T0078957.1 MGP_LPJ_G0030997.1 mouse_genomes_project 6 110401698 110413798 + MGP_LPJ_P0078957 Setmar protein_coding protein_coding MGP_LPJ_T0078958.1 MGP_LPJ_G0030997.1 mouse_genomes_project 6 110401715 110413798 + MGP_LPJ_P0078958 Setmar protein_coding nonsense_mediated_decay MGP_LPJ_T0008668.1 MGP_LPJ_G0007007.1 mouse_genomes_project 6 87293472 87298439 + 4930553P18Rik lincRNA lincRNA MGP_LPJ_T0078805.1 MGP_LPJ_G0030966.1 mouse_genomes_project 6 97114657 97114756 + MGP_LPJ_P0078805 Gm10234 protein_coding protein_coding MGP_LPJ_T0015572.1 MGP_LPJ_G0013663.1 mouse_genomes_project 6 134425011 134425353 - processed_pseudogene processed_pseudogene MGP_LPJ_T0076809.1 MGP_LPJ_G0030493.1 mouse_genomes_project 6 36907376 36964083 + MGP_LPJ_P0076809 Luc7l2 protein_coding protein_coding MGP_LPJ_T0076810.1 MGP_LPJ_G0030493.1 mouse_genomes_project 6 36907507 36968300 + MGP_LPJ_P0076810 Luc7l2 protein_coding protein_coding MGP_LPJ_T0076811.1 MGP_LPJ_G0030493.1 mouse_genomes_project 6 36907507 36965421 + MGP_LPJ_P0076811 Luc7l2 protein_coding protein_coding MGP_LPJ_T0076812.1 MGP_LPJ_G0030493.1 mouse_genomes_project 6 36907761 36968298 + MGP_LPJ_P0076812 Luc7l2 protein_coding nonsense_mediated_decay MGP_LPJ_T0076813.1 MGP_LPJ_G0030493.1 mouse_genomes_project 6 36907778 36914149 + Luc7l2 protein_coding processed_transcript MGP_LPJ_T0076814.1 MGP_LPJ_G0030493.1 mouse_genomes_project 6 36907778 36914280 + Luc7l2 protein_coding retained_intron MGP_LPJ_T0076815.1 MGP_LPJ_G0030493.1 mouse_genomes_project 6 36907778 36910238 + Luc7l2 protein_coding processed_transcript MGP_LPJ_T0076816.1 MGP_LPJ_G0030493.1 mouse_genomes_project 6 36908050 36968257 + MGP_LPJ_P0076816 Luc7l2 protein_coding protein_coding MGP_LPJ_T0076817.1 MGP_LPJ_G0030493.1 mouse_genomes_project 6 36908090 36943243 + Luc7l2 protein_coding processed_transcript MGP_LPJ_T0076818.1 MGP_LPJ_G0030493.1 mouse_genomes_project 6 36911953 36947224 + MGP_LPJ_P0076818 Luc7l2 protein_coding nonsense_mediated_decay MGP_LPJ_T0076819.1 MGP_LPJ_G0030493.1 mouse_genomes_project 6 36913871 36967747 + MGP_LPJ_P0076819 Luc7l2 protein_coding nonsense_mediated_decay MGP_LPJ_T0076820.1 MGP_LPJ_G0030493.1 mouse_genomes_project 6 36915445 36925706 + Luc7l2 protein_coding retained_intron MGP_LPJ_T0076821.1 MGP_LPJ_G0030493.1 mouse_genomes_project 6 36926242 36965069 + Luc7l2 protein_coding retained_intron MGP_LPJ_T0015476.1 MGP_LPJ_G0013567.1 mouse_genomes_project 6 106192024 106192404 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002123.1 MGP_LPJ_G0002033.1 mouse_genomes_project 6 99461149 99462813 - TEC TEC MGP_LPJ_T0008738.1 MGP_LPJ_G0007063.1 mouse_genomes_project 6 125624880 125626189 + 1700063H04Rik lincRNA lincRNA MGP_LPJ_T0002205.1 MGP_LPJ_G0002114.1 mouse_genomes_project 6 150995512 150997388 + TEC TEC MGP_LPJ_T0080691.1 MGP_LPJ_G0031380.1 mouse_genomes_project 6 150054611 150112673 - MGP_LPJ_P0080691 Bcat1 protein_coding protein_coding MGP_LPJ_T0080692.1 MGP_LPJ_G0031380.1 mouse_genomes_project 6 150060719 150145859 - MGP_LPJ_P0080692 Bcat1 protein_coding protein_coding MGP_LPJ_T0080693.1 MGP_LPJ_G0031380.1 mouse_genomes_project 6 150066649 150145859 - MGP_LPJ_P0080693 Bcat1 protein_coding protein_coding MGP_LPJ_T0080694.1 MGP_LPJ_G0031380.1 mouse_genomes_project 6 150066929 150099196 - Bcat1 protein_coding processed_transcript MGP_LPJ_T0080695.1 MGP_LPJ_G0031380.1 mouse_genomes_project 6 150072366 150112471 - MGP_LPJ_P0080695 Bcat1 protein_coding protein_coding MGP_LPJ_T0080696.1 MGP_LPJ_G0031380.1 mouse_genomes_project 6 150081283 150096723 - MGP_LPJ_P0080696 Bcat1 protein_coding protein_coding MGP_LPJ_T0080697.1 MGP_LPJ_G0031380.1 mouse_genomes_project 6 150084696 150111715 - MGP_LPJ_P0080697 Bcat1 protein_coding protein_coding MGP_LPJ_T0080698.1 MGP_LPJ_G0031380.1 mouse_genomes_project 6 150096669 150104738 - Bcat1 protein_coding processed_transcript MGP_LPJ_T0080699.1 MGP_LPJ_G0031380.1 mouse_genomes_project 6 150096688 150111524 - MGP_LPJ_P0080699 Bcat1 protein_coding protein_coding MGP_LPJ_T0080700.1 MGP_LPJ_G0031380.1 mouse_genomes_project 6 150096752 150104850 - Bcat1 protein_coding processed_transcript MGP_LPJ_T0079150.1 MGP_LPJ_G0031031.1 mouse_genomes_project 6 116169182 116181348 + MGP_LPJ_P0079150 Brk1 protein_coding protein_coding MGP_LPJ_T0015508.1 MGP_LPJ_G0013599.1 mouse_genomes_project 6 117734832 117735163 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100923.1 MGP_LPJ_G0039186.1 mouse_genomes_project 6 126886711 126886843 + Gm25065 snoRNA snoRNA MGP_LPJ_T0015376.1 MGP_LPJ_G0013467.1 mouse_genomes_project 6 68242374 68243577 - processed_pseudogene processed_pseudogene MGP_LPJ_T0077598.1 MGP_LPJ_G0030720.1 mouse_genomes_project 6 58386527 58398773 + MGP_LPJ_P0077598 Herc3 protein_coding protein_coding MGP_LPJ_T0077599.1 MGP_LPJ_G0030720.1 mouse_genomes_project 6 58386565 58398759 + MGP_LPJ_P0077599 Herc3 protein_coding protein_coding MGP_LPJ_T0077600.1 MGP_LPJ_G0030720.1 mouse_genomes_project 6 58386586 58409913 + MGP_LPJ_P0077600 Herc3 protein_coding protein_coding MGP_LPJ_T0077601.1 MGP_LPJ_G0030720.1 mouse_genomes_project 6 58386810 58409917 + MGP_LPJ_P0077601 Herc3 protein_coding protein_coding MGP_LPJ_T0077602.1 MGP_LPJ_G0030720.1 mouse_genomes_project 6 58386923 58462895 + MGP_LPJ_P0077602 Herc3 protein_coding protein_coding MGP_LPJ_T0077603.1 MGP_LPJ_G0030720.1 mouse_genomes_project 6 58388762 58479891 + MGP_LPJ_P0077603 Herc3 protein_coding protein_coding MGP_LPJ_T0077604.1 MGP_LPJ_G0030720.1 mouse_genomes_project 6 58418905 58431195 + Herc3 protein_coding retained_intron MGP_LPJ_T0077605.1 MGP_LPJ_G0030720.1 mouse_genomes_project 6 58431792 58432492 + Herc3 protein_coding processed_transcript MGP_LPJ_T0077606.1 MGP_LPJ_G0030720.1 mouse_genomes_project 6 58447544 58461365 + MGP_LPJ_P0077606 Herc3 protein_coding protein_coding MGP_LPJ_T0077607.1 MGP_LPJ_G0030720.1 mouse_genomes_project 6 58460561 58463101 + Herc3 protein_coding retained_intron MGP_LPJ_T0077610.1 MGP_LPJ_G0030720.1 mouse_genomes_project 6 58465853 58476316 + Herc3 protein_coding processed_transcript MGP_LPJ_T0077611.1 MGP_LPJ_G0030720.1 mouse_genomes_project 6 58469228 58479893 + MGP_LPJ_P0077611 Herc3 protein_coding unknown_likely_coding MGP_LPJ_T0015549.1 MGP_LPJ_G0013640.1 mouse_genomes_project 6 128707457 128707775 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098295.1 MGP_LPJ_G0036576.1 mouse_genomes_project 6 144973856 144973967 - Gm24174 rRNA rRNA MGP_LPJ_T0076246.1 MGP_LPJ_G0030384.1 mouse_genomes_project 6 18749919 19292462 + MGP_LPJ_P0076246 Kcnd2 protein_coding protein_coding MGP_LPJ_T0005111.1 MGP_LPJ_G0004361.1 mouse_genomes_project 6 130702286 130704365 + antisense antisense MGP_LPJ_T0077836.1 MGP_LPJ_G0030771.1 mouse_genomes_project 6 72810964 72816027 + MGP_LPJ_P0077836 Tmem150a protein_coding protein_coding MGP_LPJ_T0077837.1 MGP_LPJ_G0030771.1 mouse_genomes_project 6 72810964 72816027 + MGP_LPJ_P0077837 Tmem150a protein_coding protein_coding MGP_LPJ_T0077838.1 MGP_LPJ_G0030771.1 mouse_genomes_project 6 72810991 72814666 + MGP_LPJ_P0077838 Tmem150a protein_coding protein_coding MGP_LPJ_T0077839.1 MGP_LPJ_G0030771.1 mouse_genomes_project 6 72812393 72815566 + Tmem150a protein_coding processed_transcript MGP_LPJ_T0077840.1 MGP_LPJ_G0030771.1 mouse_genomes_project 6 72812490 72815017 + MGP_LPJ_P0077840 Tmem150a protein_coding protein_coding MGP_LPJ_T0077160.1 MGP_LPJ_G0030598.1 mouse_genomes_project 6 47453087 47457274 + MGP_LPJ_P0077160 Atp6v0e2 protein_coding protein_coding MGP_LPJ_T0077161.1 MGP_LPJ_G0030598.1 mouse_genomes_project 6 47453110 47455336 + Atp6v0e2 protein_coding retained_intron MGP_LPJ_T0077162.1 MGP_LPJ_G0030598.1 mouse_genomes_project 6 47453137 47457274 + MGP_LPJ_P0077162 Atp6v0e2 protein_coding protein_coding MGP_LPJ_T0078435.1 MGP_LPJ_G0030888.1 mouse_genomes_project 6 88786325 88796196 + MGP_LPJ_P0078435 Bmp10 protein_coding protein_coding MGP_LPJ_T0078520.1 MGP_LPJ_G0030907.1 mouse_genomes_project 6 89939706 89955933 - MGP_LPJ_P0078520 Sec61a1 protein_coding protein_coding MGP_LPJ_T0078521.1 MGP_LPJ_G0030907.1 mouse_genomes_project 6 89940928 89942499 - Sec61a1 protein_coding processed_transcript MGP_LPJ_T0078522.1 MGP_LPJ_G0030907.1 mouse_genomes_project 6 89942300 89949455 - Sec61a1 protein_coding processed_transcript MGP_LPJ_T0078523.1 MGP_LPJ_G0030907.1 mouse_genomes_project 6 89942456 89950929 - Sec61a1 protein_coding retained_intron MGP_LPJ_T0078524.1 MGP_LPJ_G0030907.1 mouse_genomes_project 6 89944806 89949773 - Sec61a1 protein_coding retained_intron MGP_LPJ_T0078525.1 MGP_LPJ_G0030907.1 mouse_genomes_project 6 89949088 89949845 - Sec61a1 protein_coding retained_intron MGP_LPJ_T0078526.1 MGP_LPJ_G0030907.1 mouse_genomes_project 6 89950838 89955801 - Sec61a1 protein_coding retained_intron MGP_LPJ_T0078527.1 MGP_LPJ_G0030907.1 mouse_genomes_project 6 89951234 89953008 - Sec61a1 protein_coding retained_intron MGP_LPJ_T0078528.1 MGP_LPJ_G0030907.1 mouse_genomes_project 6 89952353 89955856 - Sec61a1 protein_coding retained_intron MGP_LPJ_T0078529.1 MGP_LPJ_G0030907.1 mouse_genomes_project 6 89952391 89955819 - Sec61a1 protein_coding processed_transcript MGP_LPJ_T0078530.1 MGP_LPJ_G0030907.1 mouse_genomes_project 6 89952411 89955931 - Sec61a1 protein_coding retained_intron MGP_LPJ_T0078531.1 MGP_LPJ_G0030907.1 mouse_genomes_project 6 89955205 89955821 - Sec61a1 protein_coding processed_transcript MGP_LPJ_T0099657.1 MGP_LPJ_G0037920.1 mouse_genomes_project 6 76846326 76846487 - Gm22283 snRNA snRNA MGP_LPJ_T0004994.1 MGP_LPJ_G0004283.1 mouse_genomes_project 6 65632793 65643497 - Gm16838 antisense antisense MGP_LPJ_T0008746.1 MGP_LPJ_G0007071.1 mouse_genomes_project 6 131269330 131285281 + Gm43634 lincRNA lincRNA MGP_LPJ_T0015321.1 MGP_LPJ_G0013412.1 mouse_genomes_project 6 58760240 58760444 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011689.1 MGP_LPJ_G0009807.1 mouse_genomes_project 6 150382882 150383212 - Gm22793 misc_RNA misc_RNA MGP_LPJ_T0079273.1 MGP_LPJ_G0031052.1 mouse_genomes_project 6 118383413 118415525 - MGP_LPJ_P0079273 Tmem40 protein_coding protein_coding MGP_LPJ_T0079274.1 MGP_LPJ_G0031052.1 mouse_genomes_project 6 118383425 118391224 - Tmem40 protein_coding processed_transcript MGP_LPJ_T0079275.1 MGP_LPJ_G0031052.1 mouse_genomes_project 6 118383815 118391566 - Tmem40 protein_coding retained_intron MGP_LPJ_T0079276.1 MGP_LPJ_G0031052.1 mouse_genomes_project 6 118383947 118407449 - MGP_LPJ_P0079276 Tmem40 protein_coding protein_coding MGP_LPJ_T0076344.1 MGP_LPJ_G0030410.1 mouse_genomes_project 6 25076916 25970297 - MGP_LPJ_P0076344 Grm8 protein_coding protein_coding MGP_LPJ_T0076345.1 MGP_LPJ_G0030410.1 mouse_genomes_project 6 25076925 25957877 - MGP_LPJ_P0076345 Grm8 protein_coding protein_coding MGP_LPJ_T0076346.1 MGP_LPJ_G0030410.1 mouse_genomes_project 6 25077409 25957947 - MGP_LPJ_P0076346 Grm8 protein_coding protein_coding MGP_LPJ_T0076347.1 MGP_LPJ_G0030410.1 mouse_genomes_project 6 25578927 25965077 - MGP_LPJ_P0076347 Grm8 protein_coding protein_coding MGP_LPJ_T0076348.1 MGP_LPJ_G0030410.1 mouse_genomes_project 6 25763513 25970930 - Grm8 protein_coding processed_transcript MGP_LPJ_T0076349.1 MGP_LPJ_G0030410.1 mouse_genomes_project 6 25957815 25964881 - MGP_LPJ_P0076349 Grm8 protein_coding protein_coding MGP_LPJ_T0076350.1 MGP_LPJ_G0030410.1 mouse_genomes_project 6 25963779 25970137 - Grm8 protein_coding processed_transcript MGP_LPJ_T0080740.1 MGP_LPJ_G0031386.1 mouse_genomes_project 6 150733500 150740404 + MGP_LPJ_P0080740 protein_coding protein_coding MGP_LPJ_T0079140.1 MGP_LPJ_G0031029.1 mouse_genomes_project 6 116090021 116160957 + MGP_LPJ_P0079140 Fancd2 protein_coding protein_coding MGP_LPJ_T0079141.1 MGP_LPJ_G0031029.1 mouse_genomes_project 6 116090043 116096181 + Fancd2 protein_coding retained_intron MGP_LPJ_T0079142.1 MGP_LPJ_G0031029.1 mouse_genomes_project 6 116090043 116097064 + Fancd2 protein_coding retained_intron MGP_LPJ_T0079143.1 MGP_LPJ_G0031029.1 mouse_genomes_project 6 116090043 116160213 + MGP_LPJ_P0079143 Fancd2 protein_coding protein_coding MGP_LPJ_T0079144.1 MGP_LPJ_G0031029.1 mouse_genomes_project 6 116112360 116114527 + Fancd2 protein_coding retained_intron MGP_LPJ_T0079145.1 MGP_LPJ_G0031029.1 mouse_genomes_project 6 116112364 116125288 + MGP_LPJ_P0079145 Fancd2 protein_coding protein_coding MGP_LPJ_T0079146.1 MGP_LPJ_G0031029.1 mouse_genomes_project 6 116131511 116138748 + MGP_LPJ_P0079146 Fancd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0079147.1 MGP_LPJ_G0031029.1 mouse_genomes_project 6 116147228 116149803 + Fancd2 protein_coding retained_intron MGP_LPJ_T0002093.1 MGP_LPJ_G0002003.1 mouse_genomes_project 6 89384767 89385811 - TEC TEC MGP_LPJ_T0002097.1 MGP_LPJ_G0002007.1 mouse_genomes_project 6 90170195 90173366 + TEC TEC MGP_LPJ_T0077007.1 MGP_LPJ_G0030552.1 mouse_genomes_project 6 40826090 40827609 + MGP_LPJ_P0077007 Zyx protein_coding protein_coding MGP_LPJ_T0077008.1 MGP_LPJ_G0030552.1 mouse_genomes_project 6 40826240 40828068 + MGP_LPJ_P0077008 Zyx protein_coding protein_coding MGP_LPJ_T0077009.1 MGP_LPJ_G0030552.1 mouse_genomes_project 6 40826288 40835015 + MGP_LPJ_P0077009 Zyx protein_coding protein_coding MGP_LPJ_T0077010.1 MGP_LPJ_G0030552.1 mouse_genomes_project 6 40826329 40834845 + MGP_LPJ_P0077010 Zyx protein_coding protein_coding MGP_LPJ_T0077011.1 MGP_LPJ_G0030552.1 mouse_genomes_project 6 40826493 40834845 + Zyx protein_coding retained_intron MGP_LPJ_T0077012.1 MGP_LPJ_G0030552.1 mouse_genomes_project 6 40826493 40834845 + MGP_LPJ_P0077012 Zyx protein_coding protein_coding MGP_LPJ_T0077013.1 MGP_LPJ_G0030552.1 mouse_genomes_project 6 40826498 40828225 + Zyx protein_coding processed_transcript MGP_LPJ_T0077014.1 MGP_LPJ_G0030552.1 mouse_genomes_project 6 40826499 40836666 + MGP_LPJ_P0077014 Zyx protein_coding protein_coding MGP_LPJ_T0077015.1 MGP_LPJ_G0030552.1 mouse_genomes_project 6 40826531 40827525 + MGP_LPJ_P0077015 Zyx protein_coding protein_coding MGP_LPJ_T0077016.1 MGP_LPJ_G0030552.1 mouse_genomes_project 6 40829938 40832490 + Zyx protein_coding processed_transcript MGP_LPJ_T0077017.1 MGP_LPJ_G0030552.1 mouse_genomes_project 6 40831589 40832714 + Zyx protein_coding processed_transcript MGP_LPJ_T0010783.1 MGP_LPJ_G0008901.1 mouse_genomes_project 6 36861370 36861439 + Mir7670 miRNA miRNA MGP_LPJ_T0100927.1 MGP_LPJ_G0039190.1 mouse_genomes_project 6 127424118 127424225 + Gm22763 snoRNA snoRNA MGP_LPJ_T0080590.1 MGP_LPJ_G0031359.1 mouse_genomes_project 6 146608646 146690333 - MGP_LPJ_P0080590 Gm5724 protein_coding protein_coding MGP_LPJ_T0076798.1 MGP_LPJ_G0030491.1 mouse_genomes_project 6 36783113 36866809 + MGP_LPJ_P0076798 Ubn2 protein_coding protein_coding MGP_LPJ_T0076799.1 MGP_LPJ_G0030491.1 mouse_genomes_project 6 36783336 36855740 + MGP_LPJ_P0076799 Ubn2 protein_coding protein_coding MGP_LPJ_T0076800.1 MGP_LPJ_G0030491.1 mouse_genomes_project 6 36789684 36880064 + MGP_LPJ_P0076800 Ubn2 protein_coding protein_coding MGP_LPJ_T0076801.1 MGP_LPJ_G0030491.1 mouse_genomes_project 6 36815864 36816644 + Ubn2 protein_coding retained_intron MGP_LPJ_T0076802.1 MGP_LPJ_G0030491.1 mouse_genomes_project 6 36816802 36838019 + Ubn2 protein_coding retained_intron MGP_LPJ_T0076803.1 MGP_LPJ_G0030491.1 mouse_genomes_project 6 36836311 36840625 + Ubn2 protein_coding retained_intron MGP_LPJ_T0076804.1 MGP_LPJ_G0030491.1 mouse_genomes_project 6 36836409 36841509 + Ubn2 protein_coding processed_transcript MGP_LPJ_T0076805.1 MGP_LPJ_G0030491.1 mouse_genomes_project 6 36837257 36855740 + Ubn2 protein_coding retained_intron MGP_LPJ_T0076806.1 MGP_LPJ_G0030491.1 mouse_genomes_project 6 36844168 36880098 + MGP_LPJ_P0076806 Ubn2 protein_coding protein_coding MGP_LPJ_T0100921.1 MGP_LPJ_G0039184.1 mouse_genomes_project 6 120879095 120879227 - Gm23908 snoRNA snoRNA MGP_LPJ_T0080347.1 MGP_LPJ_G0031312.1 mouse_genomes_project 6 139104956 139183943 - MGP_LPJ_P0080347 Dusp16 protein_coding protein_coding MGP_LPJ_T0080348.1 MGP_LPJ_G0031312.1 mouse_genomes_project 6 139104961 139184093 - MGP_LPJ_P0080348 Dusp16 protein_coding protein_coding MGP_LPJ_T0080349.1 MGP_LPJ_G0031312.1 mouse_genomes_project 6 139107303 139152595 - MGP_LPJ_P0080349 Dusp16 protein_coding nonsense_mediated_decay MGP_LPJ_T0080350.1 MGP_LPJ_G0031312.1 mouse_genomes_project 6 139108258 139115543 - Dusp16 protein_coding retained_intron MGP_LPJ_T0080351.1 MGP_LPJ_G0031312.1 mouse_genomes_project 6 139108410 139133936 - Dusp16 protein_coding processed_transcript MGP_LPJ_T0080352.1 MGP_LPJ_G0031312.1 mouse_genomes_project 6 139110067 139149700 - MGP_LPJ_P0080352 Dusp16 protein_coding nonsense_mediated_decay MGP_LPJ_T0080353.1 MGP_LPJ_G0031312.1 mouse_genomes_project 6 139127752 139182782 - MGP_LPJ_P0080353 Dusp16 protein_coding protein_coding MGP_LPJ_T0079720.1 MGP_LPJ_G0031135.1 mouse_genomes_project 6 126267925 126279282 + MGP_LPJ_P0079720 Clec4a3 protein_coding protein_coding MGP_LPJ_T0079721.1 MGP_LPJ_G0031135.1 mouse_genomes_project 6 126268054 126279281 + MGP_LPJ_P0079721 Clec4a3 protein_coding protein_coding MGP_LPJ_T0079722.1 MGP_LPJ_G0031135.1 mouse_genomes_project 6 126268188 126275691 + MGP_LPJ_P0079722 Clec4a3 protein_coding protein_coding MGP_LPJ_T0099652.1 MGP_LPJ_G0037915.1 mouse_genomes_project 6 64251924 64252027 + Gm25205 snRNA snRNA MGP_LPJ_T0002584.1 MGP_LPJ_G0002483.1 mouse_genomes_project 6 40050384 40050432 + MGP_LPJ_P0002584 Trbj1-1 TR_J_gene TR_J_gene MGP_LPJ_T0008530.1 MGP_LPJ_G0006908.1 mouse_genomes_project 6 14518736 14527276 + D830026I12Rik lincRNA lincRNA MGP_LPJ_T0008531.1 MGP_LPJ_G0006908.1 mouse_genomes_project 6 14519101 14528182 + D830026I12Rik lincRNA lincRNA MGP_LPJ_T0008532.1 MGP_LPJ_G0006908.1 mouse_genomes_project 6 14519116 14533005 + D830026I12Rik lincRNA lincRNA MGP_LPJ_T0000236.1 MGP_LPJ_G0000177.1 mouse_genomes_project 6 70491140 70491664 - MGP_LPJ_P0000236 Igkv6-15 IG_V_gene IG_V_gene MGP_LPJ_T0102261.1 MGP_LPJ_G0040298.1 mouse_genomes_project 6 127623529 127646459 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0015316.1 MGP_LPJ_G0013407.1 mouse_genomes_project 6 57949480 57949644 - processed_pseudogene processed_pseudogene MGP_LPJ_T0079999.1 MGP_LPJ_G0031190.1 mouse_genomes_project 6 128722978 128730895 - MGP_LPJ_P0079999 Tapbpl protein_coding protein_coding MGP_LPJ_T0015598.1 MGP_LPJ_G0013689.1 mouse_genomes_project 6 137376202 137376548 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015211.1 MGP_LPJ_G0013302.1 mouse_genomes_project 6 13501773 13502020 - processed_pseudogene processed_pseudogene MGP_LPJ_T0004958.1 MGP_LPJ_G0004256.1 mouse_genomes_project 6 37444743 37448464 - 1700025N23Rik antisense antisense MGP_LPJ_T0080180.1 MGP_LPJ_G0031235.1 mouse_genomes_project 6 132638652 132655107 - MGP_LPJ_P0080180 protein_coding protein_coding MGP_LPJ_T0015241.1 MGP_LPJ_G0013332.1 mouse_genomes_project 6 30759737 30759972 + processed_pseudogene processed_pseudogene MGP_LPJ_T0076319.1 MGP_LPJ_G0030402.1 mouse_genomes_project 6 22333266 22396984 - MGP_LPJ_P0076319 Wasl protein_coding protein_coding MGP_LPJ_T0076320.1 MGP_LPJ_G0030402.1 mouse_genomes_project 6 22346135 22348559 - Wasl protein_coding retained_intron MGP_LPJ_T0076321.1 MGP_LPJ_G0030402.1 mouse_genomes_project 6 22360940 22396963 - MGP_LPJ_P0076321 Wasl protein_coding protein_coding MGP_LPJ_T0076322.1 MGP_LPJ_G0030402.1 mouse_genomes_project 6 22370289 22396913 - Wasl protein_coding processed_transcript MGP_LPJ_T0001958.1 MGP_LPJ_G0001868.1 mouse_genomes_project 6 18794987 18802778 + TEC TEC MGP_LPJ_T0099682.1 MGP_LPJ_G0037945.1 mouse_genomes_project 6 133777718 133777792 + Gm23977 snRNA snRNA MGP_LPJ_T0078489.1 MGP_LPJ_G0030899.1 mouse_genomes_project 6 89303632 89326139 + MGP_LPJ_P0078489 Hmces protein_coding protein_coding MGP_LPJ_T0078490.1 MGP_LPJ_G0030899.1 mouse_genomes_project 6 89303647 89322558 + Hmces protein_coding processed_transcript MGP_LPJ_T0078491.1 MGP_LPJ_G0030899.1 mouse_genomes_project 6 89303655 89304701 + Hmces protein_coding processed_transcript MGP_LPJ_T0078492.1 MGP_LPJ_G0030899.1 mouse_genomes_project 6 89303676 89311249 + MGP_LPJ_P0078492 Hmces protein_coding nonsense_mediated_decay MGP_LPJ_T0078493.1 MGP_LPJ_G0030899.1 mouse_genomes_project 6 89304003 89326139 + MGP_LPJ_P0078493 Hmces protein_coding protein_coding MGP_LPJ_T0078494.1 MGP_LPJ_G0030899.1 mouse_genomes_project 6 89307621 89322935 + Hmces protein_coding processed_transcript MGP_LPJ_T0078495.1 MGP_LPJ_G0030899.1 mouse_genomes_project 6 89322502 89326039 + Hmces protein_coding retained_intron MGP_LPJ_T0078633.1 MGP_LPJ_G0030934.1 mouse_genomes_project 6 91838907 91874176 + MGP_LPJ_P0078633 Uroc1 protein_coding protein_coding MGP_LPJ_T0078634.1 MGP_LPJ_G0030934.1 mouse_genomes_project 6 91838912 91874171 + MGP_LPJ_P0078634 Uroc1 protein_coding protein_coding MGP_LPJ_T0008684.1 MGP_LPJ_G0007019.1 mouse_genomes_project 6 90734492 90735816 - Gm44204 lincRNA lincRNA MGP_LPJ_T0101560.1 MGP_LPJ_G0039663.1 mouse_genomes_project 6 46756313 46767693 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101561.1 MGP_LPJ_G0039663.1 mouse_genomes_project 6 46756337 46761289 + transcribed_unprocessed_pseudogene retained_intron MGP_LPJ_T0101562.1 MGP_LPJ_G0039663.1 mouse_genomes_project 6 46756345 46761307 + transcribed_unprocessed_pseudogene retained_intron MGP_LPJ_T0101563.1 MGP_LPJ_G0039663.1 mouse_genomes_project 6 46756350 46759867 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101564.1 MGP_LPJ_G0039663.1 mouse_genomes_project 6 46756350 46766297 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101565.1 MGP_LPJ_G0039663.1 mouse_genomes_project 6 46756392 46766718 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101566.1 MGP_LPJ_G0039663.1 mouse_genomes_project 6 46758571 46762129 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0101567.1 MGP_LPJ_G0039663.1 mouse_genomes_project 6 46758639 46764478 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101568.1 MGP_LPJ_G0039663.1 mouse_genomes_project 6 46759031 46769154 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101569.1 MGP_LPJ_G0039663.1 mouse_genomes_project 6 46759044 46766719 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101570.1 MGP_LPJ_G0039663.1 mouse_genomes_project 6 46759813 46766718 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0102233.1 MGP_LPJ_G0040270.1 mouse_genomes_project 6 57598393 57599287 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002114.1 MGP_LPJ_G0002024.1 mouse_genomes_project 6 93519944 93521202 - TEC TEC MGP_LPJ_T0076959.1 MGP_LPJ_G0030537.1 mouse_genomes_project 6 40203862 40205149 + MGP_LPJ_P0076959 1700034O15Rik protein_coding protein_coding MGP_LPJ_T0002062.1 MGP_LPJ_G0001972.1 mouse_genomes_project 6 81355626 81358345 + TEC TEC MGP_LPJ_T0080178.1 MGP_LPJ_G0031234.1 mouse_genomes_project 6 132476084 132478048 - Klrb1 protein_coding processed_transcript MGP_LPJ_T0080179.1 MGP_LPJ_G0031234.1 mouse_genomes_project 6 132476698 132504997 - MGP_LPJ_P0080179 Klrb1 protein_coding protein_coding MGP_LPJ_T0076050.1 MGP_LPJ_G0030350.1 mouse_genomes_project 6 4720913 4751692 + MGP_LPJ_P0076050 C1galt1 protein_coding protein_coding MGP_LPJ_T0008787.1 MGP_LPJ_G0007097.1 mouse_genomes_project 6 150340263 150341607 + Gm15706 lincRNA lincRNA MGP_LPJ_T0015621.1 MGP_LPJ_G0013712.1 mouse_genomes_project 6 151767762 151768110 - processed_pseudogene processed_pseudogene MGP_LPJ_T0076247.1 MGP_LPJ_G0030385.1 mouse_genomes_project 6 19335408 19414223 - MGP_LPJ_P0076247 Tspan12 protein_coding protein_coding MGP_LPJ_T0076248.1 MGP_LPJ_G0030385.1 mouse_genomes_project 6 19335408 19414660 - MGP_LPJ_P0076248 Tspan12 protein_coding protein_coding MGP_LPJ_T0076249.1 MGP_LPJ_G0030385.1 mouse_genomes_project 6 19360137 19414116 - MGP_LPJ_P0076249 Tspan12 protein_coding protein_coding MGP_LPJ_T0076250.1 MGP_LPJ_G0030385.1 mouse_genomes_project 6 19365147 19414049 - MGP_LPJ_P0076250 Tspan12 protein_coding protein_coding MGP_LPJ_T0076251.1 MGP_LPJ_G0030385.1 mouse_genomes_project 6 19400484 19414304 - MGP_LPJ_P0076251 Tspan12 protein_coding protein_coding MGP_LPJ_T0076252.1 MGP_LPJ_G0030385.1 mouse_genomes_project 6 19413139 19413963 - MGP_LPJ_P0076252 Tspan12 protein_coding protein_coding MGP_LPJ_T0098291.1 MGP_LPJ_G0036572.1 mouse_genomes_project 6 114090170 114090281 + Gm22093 rRNA rRNA MGP_LPJ_T0018253.1 MGP_LPJ_G0015562.1 mouse_genomes_project 6 123981850 123987306 + Gm4651 processed_transcript antisense MGP_LPJ_T0018254.1 MGP_LPJ_G0015562.1 mouse_genomes_project 6 123981982 123983474 + Gm4651 processed_transcript retained_intron MGP_LPJ_T0008560.1 MGP_LPJ_G0006927.1 mouse_genomes_project 6 29726094 29873432 + Gm43154 lincRNA lincRNA MGP_LPJ_T0008561.1 MGP_LPJ_G0006927.1 mouse_genomes_project 6 29726172 29873695 + Gm43154 lincRNA lincRNA MGP_LPJ_T0008564.1 MGP_LPJ_G0006927.1 mouse_genomes_project 6 29789537 29873697 + Gm43154 lincRNA lincRNA MGP_LPJ_T0077722.1 MGP_LPJ_G0030747.1 mouse_genomes_project 6 71120843 71149736 - MGP_LPJ_P0077722 Rpia protein_coding protein_coding MGP_LPJ_T0077723.1 MGP_LPJ_G0030747.1 mouse_genomes_project 6 71138043 71149507 - Rpia protein_coding retained_intron MGP_LPJ_T0000316.1 MGP_LPJ_G0000254.1 mouse_genomes_project 6 67883291 67883758 + IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0010824.1 MGP_LPJ_G0008942.1 mouse_genomes_project 6 121214780 121214863 + Gm25953 miRNA miRNA MGP_LPJ_T0077683.1 MGP_LPJ_G0030738.1 mouse_genomes_project 6 66638062 66710712 - MGP_LPJ_P0077683 protein_coding protein_coding MGP_LPJ_T0002210.1 MGP_LPJ_G0002119.1 mouse_genomes_project 6 152712610 152716499 - TEC TEC MGP_LPJ_T0002072.1 MGP_LPJ_G0001982.1 mouse_genomes_project 6 86952547 86957080 + TEC TEC MGP_LPJ_T0079137.1 MGP_LPJ_G0031028.1 mouse_genomes_project 6 116071382 116089992 - MGP_LPJ_P0079137 Emc3 protein_coding protein_coding MGP_LPJ_T0079138.1 MGP_LPJ_G0031028.1 mouse_genomes_project 6 116076300 116077418 - Emc3 protein_coding retained_intron MGP_LPJ_T0079139.1 MGP_LPJ_G0031028.1 mouse_genomes_project 6 116086923 116089958 - Emc3 protein_coding retained_intron MGP_LPJ_T0080107.1 MGP_LPJ_G0031217.1 mouse_genomes_project 6 131614219 131693065 - MGP_LPJ_P0080107 Tspan9 protein_coding protein_coding MGP_LPJ_T0080108.1 MGP_LPJ_G0031217.1 mouse_genomes_project 6 131618080 131619671 - Tspan9 protein_coding retained_intron MGP_LPJ_T0080109.1 MGP_LPJ_G0031217.1 mouse_genomes_project 6 131618615 131693569 - MGP_LPJ_P0080109 Tspan9 protein_coding protein_coding MGP_LPJ_T0080110.1 MGP_LPJ_G0031217.1 mouse_genomes_project 6 131619284 131805896 - MGP_LPJ_P0080110 Tspan9 protein_coding protein_coding MGP_LPJ_T0080111.1 MGP_LPJ_G0031217.1 mouse_genomes_project 6 131619290 131803078 - MGP_LPJ_P0080111 Tspan9 protein_coding protein_coding MGP_LPJ_T0080112.1 MGP_LPJ_G0031217.1 mouse_genomes_project 6 131619934 131805889 - MGP_LPJ_P0080112 Tspan9 protein_coding protein_coding MGP_LPJ_T0080113.1 MGP_LPJ_G0031217.1 mouse_genomes_project 6 131620019 131786464 - MGP_LPJ_P0080113 Tspan9 protein_coding protein_coding MGP_LPJ_T0080114.1 MGP_LPJ_G0031217.1 mouse_genomes_project 6 131743070 131805930 - Tspan9 protein_coding processed_transcript MGP_LPJ_T0002212.1 MGP_LPJ_G0002121.1 mouse_genomes_project 6 153554735 153558247 - TEC TEC MGP_LPJ_T0015279.1 MGP_LPJ_G0013370.1 mouse_genomes_project 6 46591547 46591926 - processed_pseudogene processed_pseudogene MGP_LPJ_T0077841.1 MGP_LPJ_G0030772.1 mouse_genomes_project 6 72815978 72818386 - Rnf181 protein_coding retained_intron MGP_LPJ_T0077842.1 MGP_LPJ_G0030772.1 mouse_genomes_project 6 72815978 72818656 - MGP_LPJ_P0077842 Rnf181 protein_coding protein_coding MGP_LPJ_T0077843.1 MGP_LPJ_G0030772.1 mouse_genomes_project 6 72815978 72818695 - MGP_LPJ_P0077843 Rnf181 protein_coding protein_coding MGP_LPJ_T0077844.1 MGP_LPJ_G0030772.1 mouse_genomes_project 6 72816136 72818623 - MGP_LPJ_P0077844 Rnf181 protein_coding nonsense_mediated_decay MGP_LPJ_T0077845.1 MGP_LPJ_G0030772.1 mouse_genomes_project 6 72816348 72817659 - MGP_LPJ_P0077845 Rnf181 protein_coding protein_coding MGP_LPJ_T0077846.1 MGP_LPJ_G0030772.1 mouse_genomes_project 6 72816509 72823219 - MGP_LPJ_P0077846 Rnf181 protein_coding protein_coding MGP_LPJ_T0077847.1 MGP_LPJ_G0030772.1 mouse_genomes_project 6 72816515 72818607 - MGP_LPJ_P0077847 Rnf181 protein_coding nonsense_mediated_decay MGP_LPJ_T0077848.1 MGP_LPJ_G0030772.1 mouse_genomes_project 6 72816541 72818653 - MGP_LPJ_P0077848 Rnf181 protein_coding nonsense_mediated_decay MGP_LPJ_T0077849.1 MGP_LPJ_G0030772.1 mouse_genomes_project 6 72816542 72818626 - MGP_LPJ_P0077849 Rnf181 protein_coding nonsense_mediated_decay MGP_LPJ_T0077850.1 MGP_LPJ_G0030772.1 mouse_genomes_project 6 72816552 72818645 - MGP_LPJ_P0077850 Rnf181 protein_coding protein_coding MGP_LPJ_T0077851.1 MGP_LPJ_G0030772.1 mouse_genomes_project 6 72816600 72818628 - MGP_LPJ_P0077851 Rnf181 protein_coding nonsense_mediated_decay MGP_LPJ_T0077852.1 MGP_LPJ_G0030772.1 mouse_genomes_project 6 72816682 72817330 - Rnf181 protein_coding retained_intron MGP_LPJ_T0077853.1 MGP_LPJ_G0030772.1 mouse_genomes_project 6 72816877 72818691 - Rnf181 protein_coding retained_intron MGP_LPJ_T0077854.1 MGP_LPJ_G0030772.1 mouse_genomes_project 6 72817277 72818258 - Rnf181 protein_coding retained_intron MGP_LPJ_T0005096.1 MGP_LPJ_G0004347.1 mouse_genomes_project 6 122394440 122402293 + Gm44317 antisense antisense MGP_LPJ_T0078452.1 MGP_LPJ_G0030893.1 mouse_genomes_project 6 89159598 89161295 + MGP_LPJ_P0078452 Gp9 protein_coding protein_coding MGP_LPJ_T0010784.1 MGP_LPJ_G0008902.1 mouse_genomes_project 6 46608910 46608987 - Mir704 miRNA miRNA MGP_LPJ_T0005051.1 MGP_LPJ_G0004316.1 mouse_genomes_project 6 89881596 89882414 + Gm44264 antisense antisense MGP_LPJ_T0015341.1 MGP_LPJ_G0013432.1 mouse_genomes_project 6 65089429 65090830 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015487.1 MGP_LPJ_G0013578.1 mouse_genomes_project 6 111556449 111557034 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015617.1 MGP_LPJ_G0013708.1 mouse_genomes_project 6 147042043 147043113 + processed_pseudogene processed_pseudogene MGP_LPJ_T0004978.1 MGP_LPJ_G0004271.1 mouse_genomes_project 6 51393083 51394223 + Gm15050 antisense antisense MGP_LPJ_T0080835.1 MGP_LPJ_G0031406.1 mouse_genomes_project 6 152647959 152686947 + MGP_LPJ_P0080835 Ccdc91 protein_coding protein_coding MGP_LPJ_T0080836.1 MGP_LPJ_G0031406.1 mouse_genomes_project 6 152648002 152817567 + MGP_LPJ_P0080836 Ccdc91 protein_coding protein_coding MGP_LPJ_T0080837.1 MGP_LPJ_G0031406.1 mouse_genomes_project 6 152648122 152719288 + MGP_LPJ_P0080837 Ccdc91 protein_coding nonsense_mediated_decay MGP_LPJ_T0080838.1 MGP_LPJ_G0031406.1 mouse_genomes_project 6 152716590 152728043 + Ccdc91 protein_coding processed_transcript MGP_LPJ_T0015562.1 MGP_LPJ_G0013653.1 mouse_genomes_project 6 132175566 132176840 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002111.1 MGP_LPJ_G0002021.1 mouse_genomes_project 6 93282948 93284783 + TEC TEC MGP_LPJ_T0008620.1 MGP_LPJ_G0006967.1 mouse_genomes_project 6 52473373 52478776 + Gm4872 lincRNA lincRNA MGP_LPJ_T0076439.1 MGP_LPJ_G0030428.1 mouse_genomes_project 6 27358323 27366068 + Flnc protein_coding retained_intron MGP_LPJ_T0076440.1 MGP_LPJ_G0030428.1 mouse_genomes_project 6 27358343 27390956 + MGP_LPJ_P0076440 Flnc protein_coding protein_coding MGP_LPJ_T0076441.1 MGP_LPJ_G0030428.1 mouse_genomes_project 6 27358343 27390956 + MGP_LPJ_P0076441 Flnc protein_coding protein_coding MGP_LPJ_T0002197.1 MGP_LPJ_G0002106.1 mouse_genomes_project 6 145140101 145140767 + TEC TEC MGP_LPJ_T0000343.1 MGP_LPJ_G0000281.1 mouse_genomes_project 6 69420130 69420606 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0001954.1 MGP_LPJ_G0001864.1 mouse_genomes_project 6 15105654 15107033 - TEC TEC MGP_LPJ_T0008923.1 MGP_LPJ_G0007205.1 mouse_genomes_project 7 75412234 75412574 - Gm28744 lincRNA lincRNA MGP_LPJ_T0084599.1 MGP_LPJ_G0032358.1 mouse_genomes_project 7 87199070 87215520 - MGP_LPJ_P0084599 Cfap161 protein_coding protein_coding MGP_LPJ_T0084600.1 MGP_LPJ_G0032358.1 mouse_genomes_project 7 87200590 87215581 - MGP_LPJ_P0084600 Cfap161 protein_coding protein_coding MGP_LPJ_T0084601.1 MGP_LPJ_G0032358.1 mouse_genomes_project 7 87206565 87214872 - MGP_LPJ_P0084601 Cfap161 protein_coding protein_coding MGP_LPJ_T0086569.1 MGP_LPJ_G0032958.1 mouse_genomes_project 7 133347504 133363688 + Srcap protein_coding retained_intron MGP_LPJ_T0086570.1 MGP_LPJ_G0032958.1 mouse_genomes_project 7 133347504 133366167 + MGP_LPJ_P0086570 Srcap protein_coding protein_coding MGP_LPJ_T0086571.1 MGP_LPJ_G0032958.1 mouse_genomes_project 7 133347523 133359489 + MGP_LPJ_P0086571 Srcap protein_coding protein_coding MGP_LPJ_T0086572.1 MGP_LPJ_G0032958.1 mouse_genomes_project 7 133347548 133361971 + MGP_LPJ_P0086572 Srcap protein_coding protein_coding MGP_LPJ_T0086573.1 MGP_LPJ_G0032958.1 mouse_genomes_project 7 133347633 133350931 + Srcap protein_coding processed_transcript MGP_LPJ_T0086574.1 MGP_LPJ_G0032958.1 mouse_genomes_project 7 133347822 133351514 + Srcap protein_coding processed_transcript MGP_LPJ_T0086575.1 MGP_LPJ_G0032958.1 mouse_genomes_project 7 133347986 133376081 + MGP_LPJ_P0086575 Srcap protein_coding protein_coding MGP_LPJ_T0086576.1 MGP_LPJ_G0032958.1 mouse_genomes_project 7 133348513 133373221 + Srcap protein_coding retained_intron MGP_LPJ_T0086577.1 MGP_LPJ_G0032958.1 mouse_genomes_project 7 133348513 133373221 + MGP_LPJ_P0086577 Srcap protein_coding protein_coding MGP_LPJ_T0086578.1 MGP_LPJ_G0032958.1 mouse_genomes_project 7 133348539 133398643 + MGP_LPJ_P0086578 Srcap protein_coding protein_coding MGP_LPJ_T0086579.1 MGP_LPJ_G0032958.1 mouse_genomes_project 7 133351510 133356336 + Srcap protein_coding retained_intron MGP_LPJ_T0086580.1 MGP_LPJ_G0032958.1 mouse_genomes_project 7 133351665 133398248 + MGP_LPJ_P0086580 Srcap protein_coding protein_coding MGP_LPJ_T0086581.1 MGP_LPJ_G0032958.1 mouse_genomes_project 7 133351665 133398248 + MGP_LPJ_P0086581 Srcap protein_coding protein_coding MGP_LPJ_T0086583.1 MGP_LPJ_G0032958.1 mouse_genomes_project 7 133370604 133372637 + Srcap protein_coding retained_intron MGP_LPJ_T0087232.1 MGP_LPJ_G0033117.1 mouse_genomes_project 7 147583304 147589570 + MGP_LPJ_P0087232 Athl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0087233.1 MGP_LPJ_G0033117.1 mouse_genomes_project 7 147583479 147589572 + Athl1 protein_coding retained_intron MGP_LPJ_T0087234.1 MGP_LPJ_G0033117.1 mouse_genomes_project 7 147583484 147585026 + Athl1 protein_coding processed_transcript MGP_LPJ_T0087235.1 MGP_LPJ_G0033117.1 mouse_genomes_project 7 147583494 147589578 + MGP_LPJ_P0087235 Athl1 protein_coding protein_coding MGP_LPJ_T0087236.1 MGP_LPJ_G0033117.1 mouse_genomes_project 7 147584223 147588758 + MGP_LPJ_P0087236 Athl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0087237.1 MGP_LPJ_G0033117.1 mouse_genomes_project 7 147584449 147589574 + MGP_LPJ_P0087237 Athl1 protein_coding protein_coding MGP_LPJ_T0084666.1 MGP_LPJ_G0032399.1 mouse_genomes_project 7 91183202 91749298 + MGP_LPJ_P0084666 Grm5 protein_coding protein_coding MGP_LPJ_T0084667.1 MGP_LPJ_G0032399.1 mouse_genomes_project 7 91202378 91749298 + MGP_LPJ_P0084667 Grm5 protein_coding protein_coding MGP_LPJ_T0084668.1 MGP_LPJ_G0032399.1 mouse_genomes_project 7 91419381 91425897 + Grm5 protein_coding processed_transcript MGP_LPJ_T0083609.1 MGP_LPJ_G0032138.1 mouse_genomes_project 7 46567805 46590991 + MGP_LPJ_P0083609 Bcat2 protein_coding protein_coding MGP_LPJ_T0083610.1 MGP_LPJ_G0032138.1 mouse_genomes_project 7 46568002 46585465 + Bcat2 protein_coding retained_intron MGP_LPJ_T0083611.1 MGP_LPJ_G0032138.1 mouse_genomes_project 7 46568025 46590991 + MGP_LPJ_P0083611 Bcat2 protein_coding protein_coding MGP_LPJ_T0083612.1 MGP_LPJ_G0032138.1 mouse_genomes_project 7 46568648 46590991 + MGP_LPJ_P0083612 Bcat2 protein_coding protein_coding MGP_LPJ_T0083613.1 MGP_LPJ_G0032138.1 mouse_genomes_project 7 46570526 46590991 + MGP_LPJ_P0083613 Bcat2 protein_coding protein_coding MGP_LPJ_T0083614.1 MGP_LPJ_G0032138.1 mouse_genomes_project 7 46572760 46583723 + MGP_LPJ_P0083614 Bcat2 protein_coding protein_coding MGP_LPJ_T0083615.1 MGP_LPJ_G0032138.1 mouse_genomes_project 7 46572882 46583842 + Bcat2 protein_coding retained_intron MGP_LPJ_T0087607.1 MGP_LPJ_G0033189.1 mouse_genomes_project 7 150282513 150320246 + MGP_LPJ_P0087607 Slc22a18 protein_coding protein_coding MGP_LPJ_T0087608.1 MGP_LPJ_G0033189.1 mouse_genomes_project 7 150294802 150297379 + Slc22a18 protein_coding processed_transcript MGP_LPJ_T0087609.1 MGP_LPJ_G0033189.1 mouse_genomes_project 7 150294849 150317967 + MGP_LPJ_P0087609 Slc22a18 protein_coding nonsense_mediated_decay MGP_LPJ_T0087610.1 MGP_LPJ_G0033189.1 mouse_genomes_project 7 150294861 150320248 + MGP_LPJ_P0087610 Slc22a18 protein_coding nonsense_mediated_decay MGP_LPJ_T0087611.1 MGP_LPJ_G0033189.1 mouse_genomes_project 7 150294886 150317968 + MGP_LPJ_P0087611 Slc22a18 protein_coding nonsense_mediated_decay MGP_LPJ_T0085433.1 MGP_LPJ_G0032671.1 mouse_genomes_project 7 110299881 110307077 - MGP_LPJ_P0085433 Arfip2 protein_coding protein_coding MGP_LPJ_T0085434.1 MGP_LPJ_G0032671.1 mouse_genomes_project 7 110299885 110306575 - Arfip2 protein_coding retained_intron MGP_LPJ_T0085435.1 MGP_LPJ_G0032671.1 mouse_genomes_project 7 110301299 110306975 - MGP_LPJ_P0085435 Arfip2 protein_coding nonsense_mediated_decay MGP_LPJ_T0085436.1 MGP_LPJ_G0032671.1 mouse_genomes_project 7 110301302 110303581 - Arfip2 protein_coding processed_transcript MGP_LPJ_T0085437.1 MGP_LPJ_G0032671.1 mouse_genomes_project 7 110301334 110306998 - MGP_LPJ_P0085437 Arfip2 protein_coding nonsense_mediated_decay MGP_LPJ_T0085438.1 MGP_LPJ_G0032671.1 mouse_genomes_project 7 110301335 110307012 - MGP_LPJ_P0085438 Arfip2 protein_coding protein_coding MGP_LPJ_T0085439.1 MGP_LPJ_G0032671.1 mouse_genomes_project 7 110302580 110303724 - Arfip2 protein_coding processed_transcript MGP_LPJ_T0085440.1 MGP_LPJ_G0032671.1 mouse_genomes_project 7 110302798 110303594 - Arfip2 protein_coding processed_transcript MGP_LPJ_T0085441.1 MGP_LPJ_G0032671.1 mouse_genomes_project 7 110302866 110306969 - MGP_LPJ_P0085441 Arfip2 protein_coding protein_coding MGP_LPJ_T0085442.1 MGP_LPJ_G0032671.1 mouse_genomes_project 7 110303526 110306996 - MGP_LPJ_P0085442 Arfip2 protein_coding nonsense_mediated_decay MGP_LPJ_T0085443.1 MGP_LPJ_G0032671.1 mouse_genomes_project 7 110305247 110307001 - Arfip2 protein_coding retained_intron MGP_LPJ_T0081220.1 MGP_LPJ_G0031476.1 mouse_genomes_project 7 2014434 2022538 - MGP_LPJ_P0081220 Sbk2 protein_coding protein_coding MGP_LPJ_T0081221.1 MGP_LPJ_G0031476.1 mouse_genomes_project 7 2015378 2022541 - MGP_LPJ_P0081221 Sbk2 protein_coding protein_coding MGP_LPJ_T0081222.1 MGP_LPJ_G0031476.1 mouse_genomes_project 7 2015819 2022547 - MGP_LPJ_P0081222 Sbk2 protein_coding protein_coding MGP_LPJ_T0081223.1 MGP_LPJ_G0031476.1 mouse_genomes_project 7 2019280 2022583 - Sbk2 protein_coding processed_transcript MGP_LPJ_T0002240.1 MGP_LPJ_G0002149.1 mouse_genomes_project 7 37320496 37322790 - TEC TEC MGP_LPJ_T0002315.1 MGP_LPJ_G0002223.1 mouse_genomes_project 7 122674594 122676516 + TEC TEC MGP_LPJ_T0085467.1 MGP_LPJ_G0032675.1 mouse_genomes_project 7 110411993 110418314 + MGP_LPJ_P0085467 Ilk protein_coding protein_coding MGP_LPJ_T0085468.1 MGP_LPJ_G0032675.1 mouse_genomes_project 7 110412072 110418307 + Ilk protein_coding retained_intron MGP_LPJ_T0085469.1 MGP_LPJ_G0032675.1 mouse_genomes_project 7 110412126 110418314 + MGP_LPJ_P0085469 Ilk protein_coding protein_coding MGP_LPJ_T0085470.1 MGP_LPJ_G0032675.1 mouse_genomes_project 7 110412134 110416432 + MGP_LPJ_P0085470 Ilk protein_coding protein_coding MGP_LPJ_T0085471.1 MGP_LPJ_G0032675.1 mouse_genomes_project 7 110412502 110416750 + Ilk protein_coding retained_intron MGP_LPJ_T0085472.1 MGP_LPJ_G0032675.1 mouse_genomes_project 7 110412524 110416864 + Ilk protein_coding retained_intron MGP_LPJ_T0085474.1 MGP_LPJ_G0032675.1 mouse_genomes_project 7 110415576 110417153 + Ilk protein_coding retained_intron MGP_LPJ_T0085475.1 MGP_LPJ_G0032675.1 mouse_genomes_project 7 110415899 110416563 + Ilk protein_coding retained_intron MGP_LPJ_T0085476.1 MGP_LPJ_G0032675.1 mouse_genomes_project 7 110415899 110417297 + MGP_LPJ_P0085476 Ilk protein_coding protein_coding MGP_LPJ_T0085477.1 MGP_LPJ_G0032675.1 mouse_genomes_project 7 110416360 110417299 + Ilk protein_coding retained_intron MGP_LPJ_T0085478.1 MGP_LPJ_G0032675.1 mouse_genomes_project 7 110416570 110417485 + Ilk protein_coding retained_intron MGP_LPJ_T0085479.1 MGP_LPJ_G0032675.1 mouse_genomes_project 7 110416971 110418165 + Ilk protein_coding retained_intron MGP_LPJ_T0085480.1 MGP_LPJ_G0032675.1 mouse_genomes_project 7 110417169 110418046 + Ilk protein_coding processed_transcript MGP_LPJ_T0084582.1 MGP_LPJ_G0032354.1 mouse_genomes_project 7 86989144 87022286 + Tmc3 protein_coding retained_intron MGP_LPJ_T0084583.1 MGP_LPJ_G0032354.1 mouse_genomes_project 7 86989148 86996046 + Tmc3 protein_coding retained_intron MGP_LPJ_T0084584.1 MGP_LPJ_G0032354.1 mouse_genomes_project 7 86989148 87029788 + MGP_LPJ_P0084584 Tmc3 protein_coding protein_coding MGP_LPJ_T0084585.1 MGP_LPJ_G0032354.1 mouse_genomes_project 7 86989309 87027126 + MGP_LPJ_P0084585 Tmc3 protein_coding protein_coding MGP_LPJ_T0084586.1 MGP_LPJ_G0032354.1 mouse_genomes_project 7 87001706 87003080 + Tmc3 protein_coding retained_intron MGP_LPJ_T0085222.1 MGP_LPJ_G0032530.1 mouse_genomes_project 7 107057074 107066807 - MGP_LPJ_P0085222 Trim68 protein_coding protein_coding MGP_LPJ_T0082282.1 MGP_LPJ_G0031820.1 mouse_genomes_project 7 26547194 26579032 + MGP_LPJ_P0082282 2310022A10Rik protein_coding protein_coding MGP_LPJ_T0082283.1 MGP_LPJ_G0031820.1 mouse_genomes_project 7 26547228 26571651 + MGP_LPJ_P0082283 2310022A10Rik protein_coding protein_coding MGP_LPJ_T0082284.1 MGP_LPJ_G0031820.1 mouse_genomes_project 7 26547231 26548033 + 2310022A10Rik protein_coding processed_transcript MGP_LPJ_T0082285.1 MGP_LPJ_G0031820.1 mouse_genomes_project 7 26547247 26579032 + MGP_LPJ_P0082285 2310022A10Rik protein_coding protein_coding MGP_LPJ_T0082286.1 MGP_LPJ_G0031820.1 mouse_genomes_project 7 26553110 26579027 + MGP_LPJ_P0082286 2310022A10Rik protein_coding protein_coding MGP_LPJ_T0082287.1 MGP_LPJ_G0031820.1 mouse_genomes_project 7 26553131 26570260 + 2310022A10Rik protein_coding retained_intron MGP_LPJ_T0082288.1 MGP_LPJ_G0031820.1 mouse_genomes_project 7 26561894 26577567 + MGP_LPJ_P0082288 2310022A10Rik protein_coding protein_coding MGP_LPJ_T0082289.1 MGP_LPJ_G0031820.1 mouse_genomes_project 7 26571399 26577353 + 2310022A10Rik protein_coding processed_transcript MGP_LPJ_T0086641.1 MGP_LPJ_G0032970.1 mouse_genomes_project 7 133622352 133646651 + MGP_LPJ_P0086641 Setd1a protein_coding protein_coding MGP_LPJ_T0086642.1 MGP_LPJ_G0032970.1 mouse_genomes_project 7 133622831 133629762 + MGP_LPJ_P0086642 Setd1a protein_coding protein_coding MGP_LPJ_T0086643.1 MGP_LPJ_G0032970.1 mouse_genomes_project 7 133623071 133629389 + MGP_LPJ_P0086643 Setd1a protein_coding protein_coding MGP_LPJ_T0086644.1 MGP_LPJ_G0032970.1 mouse_genomes_project 7 133623071 133646644 + MGP_LPJ_P0086644 Setd1a protein_coding protein_coding MGP_LPJ_T0086645.1 MGP_LPJ_G0032970.1 mouse_genomes_project 7 133623377 133624248 + MGP_LPJ_P0086645 Setd1a protein_coding protein_coding MGP_LPJ_T0086646.1 MGP_LPJ_G0032970.1 mouse_genomes_project 7 133624259 133627586 + Setd1a protein_coding processed_transcript MGP_LPJ_T0087173.1 MGP_LPJ_G0033091.1 mouse_genomes_project 7 146975070 146976006 - MGP_LPJ_P0087173 Olfr60 protein_coding protein_coding MGP_LPJ_T0015660.1 MGP_LPJ_G0013751.1 mouse_genomes_project 7 10273158 10273784 - processed_pseudogene processed_pseudogene MGP_LPJ_T0085331.1 MGP_LPJ_G0032622.1 mouse_genomes_project 7 108804215 108814650 + MGP_LPJ_P0085331 protein_coding protein_coding MGP_LPJ_T0085334.1 MGP_LPJ_G0032622.1 mouse_genomes_project 7 108807394 108814358 + MGP_LPJ_P0085334 protein_coding protein_coding MGP_LPJ_T0085335.1 MGP_LPJ_G0032622.1 mouse_genomes_project 7 108807394 108814358 + MGP_LPJ_P0085335 protein_coding protein_coding MGP_LPJ_T0082778.1 MGP_LPJ_G0031941.1 mouse_genomes_project 7 30018987 30019585 + MGP_LPJ_P0082778 2200002J24Rik protein_coding protein_coding MGP_LPJ_T0084715.1 MGP_LPJ_G0032414.1 mouse_genomes_project 7 94123909 94126258 + MGP_LPJ_P0084715 Ccdc89 protein_coding protein_coding MGP_LPJ_T0015768.1 MGP_LPJ_G0013859.1 mouse_genomes_project 7 58935492 58936892 + processed_pseudogene processed_pseudogene MGP_LPJ_T0081196.1 MGP_LPJ_G0031466.1 mouse_genomes_project 7 1824596 1826000 + MGP_LPJ_P0081196 Tmem190 protein_coding protein_coding MGP_LPJ_T0081197.1 MGP_LPJ_G0031466.1 mouse_genomes_project 7 1824610 1825016 + Tmem190 protein_coding retained_intron MGP_LPJ_T0087050.1 MGP_LPJ_G0033057.1 mouse_genomes_project 7 144729045 144918993 - MGP_LPJ_P0087050 Tcerg1l protein_coding protein_coding MGP_LPJ_T0087051.1 MGP_LPJ_G0033057.1 mouse_genomes_project 7 144729788 144787329 - Tcerg1l protein_coding processed_transcript MGP_LPJ_T0087052.1 MGP_LPJ_G0033057.1 mouse_genomes_project 7 144778659 144918995 - Tcerg1l protein_coding retained_intron MGP_LPJ_T0086420.1 MGP_LPJ_G0032924.1 mouse_genomes_project 7 132658725 132664316 - MGP_LPJ_P0086420 Tmem219 protein_coding protein_coding MGP_LPJ_T0086421.1 MGP_LPJ_G0032924.1 mouse_genomes_project 7 132658772 132669984 - MGP_LPJ_P0086421 Tmem219 protein_coding protein_coding MGP_LPJ_T0086422.1 MGP_LPJ_G0032924.1 mouse_genomes_project 7 132658774 132661863 - Tmem219 protein_coding retained_intron MGP_LPJ_T0086423.1 MGP_LPJ_G0032924.1 mouse_genomes_project 7 132658774 132697211 - MGP_LPJ_P0086423 Tmem219 protein_coding protein_coding MGP_LPJ_T0086424.1 MGP_LPJ_G0032924.1 mouse_genomes_project 7 132658774 132670813 - MGP_LPJ_P0086424 Tmem219 protein_coding protein_coding MGP_LPJ_T0086425.1 MGP_LPJ_G0032924.1 mouse_genomes_project 7 132658774 132670836 - MGP_LPJ_P0086425 Tmem219 protein_coding protein_coding MGP_LPJ_T0086426.1 MGP_LPJ_G0032924.1 mouse_genomes_project 7 132658776 132669436 - MGP_LPJ_P0086426 Tmem219 protein_coding protein_coding MGP_LPJ_T0086427.1 MGP_LPJ_G0032924.1 mouse_genomes_project 7 132661582 132697213 - MGP_LPJ_P0086427 Tmem219 protein_coding protein_coding MGP_LPJ_T0086428.1 MGP_LPJ_G0032924.1 mouse_genomes_project 7 132663540 132670841 - Tmem219 protein_coding retained_intron MGP_LPJ_T0086429.1 MGP_LPJ_G0032924.1 mouse_genomes_project 7 132664162 132697196 - MGP_LPJ_P0086429 Tmem219 protein_coding protein_coding MGP_LPJ_T0002304.1 MGP_LPJ_G0002212.1 mouse_genomes_project 7 82997225 82998499 - TEC TEC MGP_LPJ_T0082047.1 MGP_LPJ_G0031762.1 mouse_genomes_project 7 24027148 24055313 + MGP_LPJ_P0082047 Cic protein_coding protein_coding MGP_LPJ_T0082048.1 MGP_LPJ_G0031762.1 mouse_genomes_project 7 24027831 24031022 + MGP_LPJ_P0082048 Cic protein_coding protein_coding MGP_LPJ_T0082049.1 MGP_LPJ_G0031762.1 mouse_genomes_project 7 24038173 24046123 + Cic protein_coding processed_transcript MGP_LPJ_T0082050.1 MGP_LPJ_G0031762.1 mouse_genomes_project 7 24039389 24046086 + Cic protein_coding processed_transcript MGP_LPJ_T0082051.1 MGP_LPJ_G0031762.1 mouse_genomes_project 7 24041927 24055299 + MGP_LPJ_P0082051 Cic protein_coding protein_coding MGP_LPJ_T0082052.1 MGP_LPJ_G0031762.1 mouse_genomes_project 7 24041927 24055302 + MGP_LPJ_P0082052 Cic protein_coding protein_coding MGP_LPJ_T0082053.1 MGP_LPJ_G0031762.1 mouse_genomes_project 7 24043963 24052496 + MGP_LPJ_P0082053 Cic protein_coding protein_coding MGP_LPJ_T0082054.1 MGP_LPJ_G0031762.1 mouse_genomes_project 7 24044370 24046349 + Cic protein_coding processed_transcript MGP_LPJ_T0082055.1 MGP_LPJ_G0031762.1 mouse_genomes_project 7 24045823 24046838 + Cic protein_coding retained_intron MGP_LPJ_T0082056.1 MGP_LPJ_G0031762.1 mouse_genomes_project 7 24046976 24055296 + Cic protein_coding retained_intron MGP_LPJ_T0082057.1 MGP_LPJ_G0031762.1 mouse_genomes_project 7 24050416 24050860 + Cic protein_coding retained_intron MGP_LPJ_T0082058.1 MGP_LPJ_G0031762.1 mouse_genomes_project 7 24052324 24055299 + MGP_LPJ_P0082058 Cic protein_coding protein_coding MGP_LPJ_T0082059.1 MGP_LPJ_G0031762.1 mouse_genomes_project 7 24052361 24053232 + Cic protein_coding retained_intron MGP_LPJ_T0082060.1 MGP_LPJ_G0031762.1 mouse_genomes_project 7 24053088 24053615 + Cic protein_coding retained_intron MGP_LPJ_T0082061.1 MGP_LPJ_G0031762.1 mouse_genomes_project 7 24054173 24055299 + MGP_LPJ_P0082061 Cic protein_coding protein_coding MGP_LPJ_T0099718.1 MGP_LPJ_G0037981.1 mouse_genomes_project 7 87602871 87603029 + Gm22177 snRNA snRNA MGP_LPJ_T0005313.1 MGP_LPJ_G0004506.1 mouse_genomes_project 7 127652510 127674537 - Gm15489 antisense antisense MGP_LPJ_T0005223.1 MGP_LPJ_G0004445.1 mouse_genomes_project 7 34305393 34313959 + Gm12781 antisense antisense MGP_LPJ_T0084327.1 MGP_LPJ_G0032301.1 mouse_genomes_project 7 82905477 82949678 + MGP_LPJ_P0084327 Wdr93 protein_coding unknown_likely_coding MGP_LPJ_T0101611.1 MGP_LPJ_G0039687.1 mouse_genomes_project 7 42503770 42505274 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0015740.1 MGP_LPJ_G0013831.1 mouse_genomes_project 7 42980074 42981809 - processed_pseudogene processed_pseudogene MGP_LPJ_T0087000.1 MGP_LPJ_G0033040.1 mouse_genomes_project 7 139985171 139997861 + MGP_LPJ_P0087000 Bccip protein_coding protein_coding MGP_LPJ_T0087001.1 MGP_LPJ_G0033040.1 mouse_genomes_project 7 139985186 139992162 + Bccip protein_coding retained_intron MGP_LPJ_T0087002.1 MGP_LPJ_G0033040.1 mouse_genomes_project 7 139985240 139991029 + Bccip protein_coding processed_transcript MGP_LPJ_T0087003.1 MGP_LPJ_G0033040.1 mouse_genomes_project 7 139991457 139997657 + Bccip protein_coding processed_transcript MGP_LPJ_T0087004.1 MGP_LPJ_G0033040.1 mouse_genomes_project 7 139994094 139995931 + Bccip protein_coding retained_intron MGP_LPJ_T0010882.1 MGP_LPJ_G0009000.1 mouse_genomes_project 7 43134376 43134486 - Gm22707 miRNA miRNA MGP_LPJ_T0005285.1 MGP_LPJ_G0004489.1 mouse_genomes_project 7 101624987 101672095 - Rsf1os1 antisense antisense MGP_LPJ_T0085289.1 MGP_LPJ_G0032592.1 mouse_genomes_project 7 108350150 108351697 - MGP_LPJ_P0085289 protein_coding protein_coding MGP_LPJ_T0085290.1 MGP_LPJ_G0032592.1 mouse_genomes_project 7 108350151 108351353 - protein_coding retained_intron MGP_LPJ_T0085291.1 MGP_LPJ_G0032592.1 mouse_genomes_project 7 108351067 108351715 - MGP_LPJ_P0085291 protein_coding protein_coding MGP_LPJ_T0008935.1 MGP_LPJ_G0007215.1 mouse_genomes_project 7 76433436 76440911 + Gm44737 lincRNA lincRNA MGP_LPJ_T0086733.1 MGP_LPJ_G0032988.1 mouse_genomes_project 7 133934856 134005405 + MGP_LPJ_P0086733 Itgam protein_coding protein_coding MGP_LPJ_T0086737.1 MGP_LPJ_G0032988.1 mouse_genomes_project 7 133993977 134004446 + MGP_LPJ_P0086737 Itgam protein_coding protein_coding MGP_LPJ_T0015889.1 MGP_LPJ_G0013980.1 mouse_genomes_project 7 147410805 147411292 + processed_pseudogene processed_pseudogene MGP_LPJ_T0084556.1 MGP_LPJ_G0032347.1 mouse_genomes_project 7 85500938 85607962 + MGP_LPJ_P0084556 Sh3gl3 protein_coding protein_coding MGP_LPJ_T0084557.1 MGP_LPJ_G0032347.1 mouse_genomes_project 7 85501585 85593148 + Sh3gl3 protein_coding retained_intron MGP_LPJ_T0084558.1 MGP_LPJ_G0032347.1 mouse_genomes_project 7 85501599 85633294 + MGP_LPJ_P0084558 Sh3gl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0084559.1 MGP_LPJ_G0032347.1 mouse_genomes_project 7 85501676 85632870 + MGP_LPJ_P0084559 Sh3gl3 protein_coding protein_coding MGP_LPJ_T0084560.1 MGP_LPJ_G0032347.1 mouse_genomes_project 7 85501693 85633294 + MGP_LPJ_P0084560 Sh3gl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0084561.1 MGP_LPJ_G0032347.1 mouse_genomes_project 7 85501899 85608025 + MGP_LPJ_P0084561 Sh3gl3 protein_coding protein_coding MGP_LPJ_T0084562.1 MGP_LPJ_G0032347.1 mouse_genomes_project 7 85501977 85503069 + Sh3gl3 protein_coding processed_transcript MGP_LPJ_T0084563.1 MGP_LPJ_G0032347.1 mouse_genomes_project 7 85593991 85633103 + MGP_LPJ_P0084563 Sh3gl3 protein_coding protein_coding MGP_LPJ_T0085869.1 MGP_LPJ_G0032814.1 mouse_genomes_project 7 123680639 123747343 - MGP_LPJ_P0085869 Syt17 protein_coding protein_coding MGP_LPJ_T0085870.1 MGP_LPJ_G0032814.1 mouse_genomes_project 7 123680642 123743116 - MGP_LPJ_P0085870 Syt17 protein_coding protein_coding MGP_LPJ_T0085871.1 MGP_LPJ_G0032814.1 mouse_genomes_project 7 123680643 123742042 - Syt17 protein_coding retained_intron MGP_LPJ_T0085872.1 MGP_LPJ_G0032814.1 mouse_genomes_project 7 123707698 123747673 - MGP_LPJ_P0085872 Syt17 protein_coding protein_coding MGP_LPJ_T0009060.1 MGP_LPJ_G0007292.1 mouse_genomes_project 7 136793991 136795988 - Etos1 lincRNA lincRNA MGP_LPJ_T0081001.1 MGP_LPJ_G0031433.1 mouse_genomes_project 7 613593 636676 - MGP_LPJ_P0081001 Mboat7 protein_coding protein_coding MGP_LPJ_T0081002.1 MGP_LPJ_G0031433.1 mouse_genomes_project 7 613597 635267 - MGP_LPJ_P0081002 Mboat7 protein_coding nonsense_mediated_decay MGP_LPJ_T0081003.1 MGP_LPJ_G0031433.1 mouse_genomes_project 7 614206 635016 - MGP_LPJ_P0081003 Mboat7 protein_coding protein_coding MGP_LPJ_T0081004.1 MGP_LPJ_G0031433.1 mouse_genomes_project 7 614579 620192 - Mboat7 protein_coding retained_intron MGP_LPJ_T0081005.1 MGP_LPJ_G0031433.1 mouse_genomes_project 7 619021 636105 - Mboat7 protein_coding retained_intron MGP_LPJ_T0081006.1 MGP_LPJ_G0031433.1 mouse_genomes_project 7 620290 636305 - MGP_LPJ_P0081006 Mboat7 protein_coding protein_coding MGP_LPJ_T0081007.1 MGP_LPJ_G0031433.1 mouse_genomes_project 7 621622 636041 - MGP_LPJ_P0081007 Mboat7 protein_coding nonsense_mediated_decay MGP_LPJ_T0081008.1 MGP_LPJ_G0031433.1 mouse_genomes_project 7 621638 636041 - MGP_LPJ_P0081008 Mboat7 protein_coding protein_coding MGP_LPJ_T0081009.1 MGP_LPJ_G0031433.1 mouse_genomes_project 7 631786 635915 - MGP_LPJ_P0081009 Mboat7 protein_coding protein_coding MGP_LPJ_T0081010.1 MGP_LPJ_G0031433.1 mouse_genomes_project 7 632215 636115 - Mboat7 protein_coding retained_intron MGP_LPJ_T0081011.1 MGP_LPJ_G0031433.1 mouse_genomes_project 7 632513 635933 - Mboat7 protein_coding retained_intron MGP_LPJ_T0081012.1 MGP_LPJ_G0031433.1 mouse_genomes_project 7 633041 636091 - Mboat7 protein_coding retained_intron MGP_LPJ_T0081013.1 MGP_LPJ_G0031433.1 mouse_genomes_project 7 634849 635807 - Mboat7 protein_coding retained_intron MGP_LPJ_T0002226.1 MGP_LPJ_G0002135.1 mouse_genomes_project 7 17274275 17277514 - TEC TEC MGP_LPJ_T0083253.1 MGP_LPJ_G0032047.1 mouse_genomes_project 7 44580543 44586830 + MGP_LPJ_P0083253 Klk7 protein_coding protein_coding MGP_LPJ_T0082510.1 MGP_LPJ_G0031880.1 mouse_genomes_project 7 28451728 28460929 + MGP_LPJ_P0082510 Yif1b protein_coding protein_coding MGP_LPJ_T0082511.1 MGP_LPJ_G0031880.1 mouse_genomes_project 7 28451752 28460929 + MGP_LPJ_P0082511 Yif1b protein_coding protein_coding MGP_LPJ_T0082512.1 MGP_LPJ_G0031880.1 mouse_genomes_project 7 28451768 28458241 + MGP_LPJ_P0082512 Yif1b protein_coding protein_coding MGP_LPJ_T0082513.1 MGP_LPJ_G0031880.1 mouse_genomes_project 7 28451851 28460993 + MGP_LPJ_P0082513 Yif1b protein_coding protein_coding MGP_LPJ_T0082514.1 MGP_LPJ_G0031880.1 mouse_genomes_project 7 28451872 28459394 + Yif1b protein_coding processed_transcript MGP_LPJ_T0002243.1 MGP_LPJ_G0002152.1 mouse_genomes_project 7 39547726 39550097 - TEC TEC MGP_LPJ_T0081547.1 MGP_LPJ_G0031610.1 mouse_genomes_project 7 14355656 14394373 + MGP_LPJ_P0081547 Zc3h4 protein_coding unknown_likely_coding MGP_LPJ_T0081548.1 MGP_LPJ_G0031610.1 mouse_genomes_project 7 14356878 14394370 + MGP_LPJ_P0081548 Zc3h4 protein_coding protein_coding MGP_LPJ_T0010952.1 MGP_LPJ_G0009070.1 mouse_genomes_project 7 146586459 146586531 - Mir202 miRNA miRNA MGP_LPJ_T0086303.1 MGP_LPJ_G0032908.1 mouse_genomes_project 7 132425602 132429132 - MGP_LPJ_P0086303 Sult1a1 protein_coding protein_coding MGP_LPJ_T0086304.1 MGP_LPJ_G0032908.1 mouse_genomes_project 7 132425603 132429132 - MGP_LPJ_P0086304 Sult1a1 protein_coding protein_coding MGP_LPJ_T0084531.1 MGP_LPJ_G0032339.1 mouse_genomes_project 7 84901700 85018620 - MGP_LPJ_P0084531 Homer2 protein_coding protein_coding MGP_LPJ_T0084532.1 MGP_LPJ_G0032339.1 mouse_genomes_project 7 84901700 85004563 - MGP_LPJ_P0084532 Homer2 protein_coding protein_coding MGP_LPJ_T0084533.1 MGP_LPJ_G0032339.1 mouse_genomes_project 7 84911490 85018458 - MGP_LPJ_P0084533 Homer2 protein_coding unknown_likely_coding MGP_LPJ_T0102337.1 MGP_LPJ_G0040373.1 mouse_genomes_project 7 24798683 24805550 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0081245.1 MGP_LPJ_G0031489.1 mouse_genomes_project 7 2142618 2162022 + MGP_LPJ_P0081245 Epn1 protein_coding protein_coding MGP_LPJ_T0081246.1 MGP_LPJ_G0031489.1 mouse_genomes_project 7 2142623 2152371 + MGP_LPJ_P0081246 Epn1 protein_coding protein_coding MGP_LPJ_T0081247.1 MGP_LPJ_G0031489.1 mouse_genomes_project 7 2142651 2162030 + MGP_LPJ_P0081247 Epn1 protein_coding unknown_likely_coding MGP_LPJ_T0081248.1 MGP_LPJ_G0031489.1 mouse_genomes_project 7 2142651 2146308 + MGP_LPJ_P0081248 Epn1 protein_coding protein_coding MGP_LPJ_T0081249.1 MGP_LPJ_G0031489.1 mouse_genomes_project 7 2142676 2162020 + MGP_LPJ_P0081249 Epn1 protein_coding protein_coding MGP_LPJ_T0081250.1 MGP_LPJ_G0031489.1 mouse_genomes_project 7 2146056 2157596 + Epn1 protein_coding processed_transcript MGP_LPJ_T0081251.1 MGP_LPJ_G0031489.1 mouse_genomes_project 7 2152247 2155374 + Epn1 protein_coding retained_intron MGP_LPJ_T0084931.1 MGP_LPJ_G0032462.1 mouse_genomes_project 7 103789022 103869310 - MGP_LPJ_P0084931 Slco2b1 protein_coding protein_coding MGP_LPJ_T0084932.1 MGP_LPJ_G0032462.1 mouse_genomes_project 7 103789608 103853021 - MGP_LPJ_P0084932 Slco2b1 protein_coding protein_coding MGP_LPJ_T0084933.1 MGP_LPJ_G0032462.1 mouse_genomes_project 7 103789608 103865114 - MGP_LPJ_P0084933 Slco2b1 protein_coding protein_coding MGP_LPJ_T0084934.1 MGP_LPJ_G0032462.1 mouse_genomes_project 7 103791076 103796190 - MGP_LPJ_P0084934 Slco2b1 protein_coding protein_coding MGP_LPJ_T0084935.1 MGP_LPJ_G0032462.1 mouse_genomes_project 7 103821710 103852840 - MGP_LPJ_P0084935 Slco2b1 protein_coding protein_coding MGP_LPJ_T0084936.1 MGP_LPJ_G0032462.1 mouse_genomes_project 7 103823311 103852794 - MGP_LPJ_P0084936 Slco2b1 protein_coding protein_coding MGP_LPJ_T0008987.1 MGP_LPJ_G0007246.1 mouse_genomes_project 7 102603667 102623421 - A630091E08Rik lincRNA lincRNA MGP_LPJ_T0099734.1 MGP_LPJ_G0037997.1 mouse_genomes_project 7 123583078 123583183 + Gm23229 snRNA snRNA MGP_LPJ_T0087688.1 MGP_LPJ_G0033208.1 mouse_genomes_project 7 151766885 151770745 + MGP_LPJ_P0087688 Fgf4 protein_coding protein_coding MGP_LPJ_T0082457.1 MGP_LPJ_G0031867.1 mouse_genomes_project 7 28037215 28039059 + MGP_LPJ_P0082457 Lgals7 protein_coding protein_coding MGP_LPJ_T0082458.1 MGP_LPJ_G0031867.1 mouse_genomes_project 7 28037591 28039647 + MGP_LPJ_P0082458 Lgals7 protein_coding protein_coding MGP_LPJ_T0082459.1 MGP_LPJ_G0031867.1 mouse_genomes_project 7 28037817 28038351 + Lgals7 protein_coding processed_transcript MGP_LPJ_T0083711.1 MGP_LPJ_G0032167.1 mouse_genomes_project 7 47157164 47236182 - MGP_LPJ_P0083711 Abcc8 protein_coding protein_coding MGP_LPJ_T0081795.1 MGP_LPJ_G0031688.1 mouse_genomes_project 7 17921277 17924645 + MGP_LPJ_P0081795 Zfp296 protein_coding protein_coding MGP_LPJ_T0087176.1 MGP_LPJ_G0033094.1 mouse_genomes_project 7 147064582 147065512 - MGP_LPJ_P0087176 Olfr532 protein_coding protein_coding MGP_LPJ_T0100967.1 MGP_LPJ_G0039230.1 mouse_genomes_project 7 61860879 61860968 - Gm22373 snoRNA snoRNA MGP_LPJ_T0082947.1 MGP_LPJ_G0031973.1 mouse_genomes_project 7 33765821 33795433 - MGP_LPJ_P0082947 Uba2 protein_coding protein_coding MGP_LPJ_T0082948.1 MGP_LPJ_G0031973.1 mouse_genomes_project 7 33765847 33767220 - Uba2 protein_coding retained_intron MGP_LPJ_T0082949.1 MGP_LPJ_G0031973.1 mouse_genomes_project 7 33766216 33769682 - MGP_LPJ_P0082949 Uba2 protein_coding protein_coding MGP_LPJ_T0082950.1 MGP_LPJ_G0031973.1 mouse_genomes_project 7 33766523 33768403 - Uba2 protein_coding retained_intron MGP_LPJ_T0082951.1 MGP_LPJ_G0031973.1 mouse_genomes_project 7 33767562 33771389 - Uba2 protein_coding retained_intron MGP_LPJ_T0082952.1 MGP_LPJ_G0031973.1 mouse_genomes_project 7 33776170 33786570 - MGP_LPJ_P0082952 Uba2 protein_coding nonsense_mediated_decay MGP_LPJ_T0082953.1 MGP_LPJ_G0031973.1 mouse_genomes_project 7 33779177 33782520 - Uba2 protein_coding retained_intron MGP_LPJ_T0082954.1 MGP_LPJ_G0031973.1 mouse_genomes_project 7 33779821 33789129 - MGP_LPJ_P0082954 Uba2 protein_coding nonsense_mediated_decay MGP_LPJ_T0082955.1 MGP_LPJ_G0031973.1 mouse_genomes_project 7 33786516 33796456 - MGP_LPJ_P0082955 Uba2 protein_coding protein_coding MGP_LPJ_T0082956.1 MGP_LPJ_G0031973.1 mouse_genomes_project 7 33787848 33789063 - Uba2 protein_coding retained_intron MGP_LPJ_T0087444.1 MGP_LPJ_G0033159.1 mouse_genomes_project 7 148555702 148583747 - MGP_LPJ_P0087444 Tollip protein_coding protein_coding MGP_LPJ_T0087445.1 MGP_LPJ_G0033159.1 mouse_genomes_project 7 148562908 148583640 - MGP_LPJ_P0087445 Tollip protein_coding protein_coding MGP_LPJ_T0087446.1 MGP_LPJ_G0033159.1 mouse_genomes_project 7 148573320 148583755 - MGP_LPJ_P0087446 Tollip protein_coding protein_coding MGP_LPJ_T0083260.1 MGP_LPJ_G0032050.1 mouse_genomes_project 7 44658964 44664843 + MGP_LPJ_P0083260 Klk4 protein_coding protein_coding MGP_LPJ_T0085365.1 MGP_LPJ_G0032637.1 mouse_genomes_project 7 109167860 109168824 + MGP_LPJ_P0085365 Olfr661 protein_coding protein_coding MGP_LPJ_T0084229.1 MGP_LPJ_G0032285.1 mouse_genomes_project 7 81862898 81873170 + MGP_LPJ_P0084229 Mrps11 protein_coding protein_coding MGP_LPJ_T0084230.1 MGP_LPJ_G0032285.1 mouse_genomes_project 7 81863092 81871016 + Mrps11 protein_coding retained_intron MGP_LPJ_T0084231.1 MGP_LPJ_G0032285.1 mouse_genomes_project 7 81863134 81869193 + Mrps11 protein_coding retained_intron MGP_LPJ_T0084232.1 MGP_LPJ_G0032285.1 mouse_genomes_project 7 81863135 81873170 + MGP_LPJ_P0084232 Mrps11 protein_coding nonsense_mediated_decay MGP_LPJ_T0084233.1 MGP_LPJ_G0032285.1 mouse_genomes_project 7 81863149 81870703 + Mrps11 protein_coding retained_intron MGP_LPJ_T0084234.1 MGP_LPJ_G0032285.1 mouse_genomes_project 7 81863150 81869085 + Mrps11 protein_coding retained_intron MGP_LPJ_T0082384.1 MGP_LPJ_G0031850.1 mouse_genomes_project 7 27547695 27557143 + MGP_LPJ_P0082384 Gmfg protein_coding protein_coding MGP_LPJ_T0082385.1 MGP_LPJ_G0031850.1 mouse_genomes_project 7 27553746 27558873 + Gmfg protein_coding processed_transcript MGP_LPJ_T0005188.1 MGP_LPJ_G0004418.1 mouse_genomes_project 7 18294467 18310841 + antisense antisense MGP_LPJ_T0084629.1 MGP_LPJ_G0032373.1 mouse_genomes_project 7 88590702 89242459 - MGP_LPJ_P0084629 protein_coding protein_coding MGP_LPJ_T0083553.1 MGP_LPJ_G0032125.1 mouse_genomes_project 7 46361406 46366819 + MGP_LPJ_P0083553 Kcna7 protein_coding protein_coding MGP_LPJ_T0081943.1 MGP_LPJ_G0031735.1 mouse_genomes_project 7 23219608 23227604 + MGP_LPJ_P0081943 Irgq protein_coding protein_coding MGP_LPJ_T0005343.1 MGP_LPJ_G0004531.1 mouse_genomes_project 7 150420404 150421571 + Gm15579 antisense antisense MGP_LPJ_T0008844.1 MGP_LPJ_G0007146.1 mouse_genomes_project 7 34188687 34200413 + Gm12784 lincRNA lincRNA MGP_LPJ_T0008845.1 MGP_LPJ_G0007146.1 mouse_genomes_project 7 34191452 34228906 + Gm12784 lincRNA lincRNA MGP_LPJ_T0002256.1 MGP_LPJ_G0002165.1 mouse_genomes_project 7 56779231 56780003 - TEC TEC MGP_LPJ_T0015878.1 MGP_LPJ_G0013969.1 mouse_genomes_project 7 134508763 134509053 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015726.1 MGP_LPJ_G0013817.1 mouse_genomes_project 7 39441806 39442592 + processed_pseudogene processed_pseudogene MGP_LPJ_T0085298.1 MGP_LPJ_G0032599.1 mouse_genomes_project 7 108457040 108458000 + MGP_LPJ_P0085298 Olfr631 protein_coding protein_coding MGP_LPJ_T0087443.1 MGP_LPJ_G0033158.1 mouse_genomes_project 7 148515090 148553974 + MGP_LPJ_P0087443 protein_coding protein_coding MGP_LPJ_T0082548.1 MGP_LPJ_G0031886.1 mouse_genomes_project 7 28754151 28775629 + MGP_LPJ_P0082548 protein_coding protein_coding MGP_LPJ_T0082549.1 MGP_LPJ_G0031886.1 mouse_genomes_project 7 28774287 28775627 + MGP_LPJ_P0082549 protein_coding protein_coding MGP_LPJ_T0083460.1 MGP_LPJ_G0032099.1 mouse_genomes_project 7 45898462 45903630 + MGP_LPJ_P0083460 Irf3 protein_coding protein_coding MGP_LPJ_T0083461.1 MGP_LPJ_G0032099.1 mouse_genomes_project 7 45898763 45903172 + MGP_LPJ_P0083461 Irf3 protein_coding protein_coding MGP_LPJ_T0086587.1 MGP_LPJ_G0032961.1 mouse_genomes_project 7 133411346 133420943 + Phkg2 protein_coding retained_intron MGP_LPJ_T0086588.1 MGP_LPJ_G0032961.1 mouse_genomes_project 7 133411386 133424701 + MGP_LPJ_P0086588 Phkg2 protein_coding nonsense_mediated_decay MGP_LPJ_T0086589.1 MGP_LPJ_G0032961.1 mouse_genomes_project 7 133411408 133424701 + MGP_LPJ_P0086589 Phkg2 protein_coding nonsense_mediated_decay MGP_LPJ_T0086590.1 MGP_LPJ_G0032961.1 mouse_genomes_project 7 133411410 133421540 + Phkg2 protein_coding retained_intron MGP_LPJ_T0086591.1 MGP_LPJ_G0032961.1 mouse_genomes_project 7 133411410 133425561 + MGP_LPJ_P0086591 Phkg2 protein_coding protein_coding MGP_LPJ_T0086592.1 MGP_LPJ_G0032961.1 mouse_genomes_project 7 133415851 133425559 + MGP_LPJ_P0086592 Phkg2 protein_coding protein_coding MGP_LPJ_T0086593.1 MGP_LPJ_G0032961.1 mouse_genomes_project 7 133415905 133425559 + MGP_LPJ_P0086593 Phkg2 protein_coding nonsense_mediated_decay MGP_LPJ_T0086594.1 MGP_LPJ_G0032961.1 mouse_genomes_project 7 133415964 133424652 + Phkg2 protein_coding retained_intron MGP_LPJ_T0086595.1 MGP_LPJ_G0032961.1 mouse_genomes_project 7 133420296 133425554 + MGP_LPJ_P0086595 Phkg2 protein_coding nonsense_mediated_decay MGP_LPJ_T0086596.1 MGP_LPJ_G0032961.1 mouse_genomes_project 7 133421539 133424673 + Phkg2 protein_coding retained_intron MGP_LPJ_T0086597.1 MGP_LPJ_G0032961.1 mouse_genomes_project 7 133424349 133424940 + Phkg2 protein_coding retained_intron MGP_LPJ_T0098057.1 MGP_LPJ_G0036338.1 mouse_genomes_project 7 118059690 118061117 + pseudogene pseudogene MGP_LPJ_T0081815.1 MGP_LPJ_G0031695.1 mouse_genomes_project 7 18047514 18050573 - MGP_LPJ_P0081815 Apoe protein_coding protein_coding MGP_LPJ_T0081816.1 MGP_LPJ_G0031695.1 mouse_genomes_project 7 18047671 18050459 - MGP_LPJ_P0081816 Apoe protein_coding protein_coding MGP_LPJ_T0081817.1 MGP_LPJ_G0031695.1 mouse_genomes_project 7 18047676 18049814 - MGP_LPJ_P0081817 Apoe protein_coding protein_coding MGP_LPJ_T0081818.1 MGP_LPJ_G0031695.1 mouse_genomes_project 7 18047676 18050415 - MGP_LPJ_P0081818 Apoe protein_coding protein_coding MGP_LPJ_T0081819.1 MGP_LPJ_G0031695.1 mouse_genomes_project 7 18047676 18050459 - MGP_LPJ_P0081819 Apoe protein_coding protein_coding MGP_LPJ_T0081820.1 MGP_LPJ_G0031695.1 mouse_genomes_project 7 18048024 18050445 - MGP_LPJ_P0081820 Apoe protein_coding protein_coding MGP_LPJ_T0081821.1 MGP_LPJ_G0031695.1 mouse_genomes_project 7 18048025 18050028 - MGP_LPJ_P0081821 Apoe protein_coding protein_coding MGP_LPJ_T0081822.1 MGP_LPJ_G0031695.1 mouse_genomes_project 7 18048248 18049654 - MGP_LPJ_P0081822 Apoe protein_coding protein_coding MGP_LPJ_T0081823.1 MGP_LPJ_G0031695.1 mouse_genomes_project 7 18048644 18050457 - MGP_LPJ_P0081823 Apoe protein_coding protein_coding MGP_LPJ_T0081824.1 MGP_LPJ_G0031695.1 mouse_genomes_project 7 18048660 18049674 - MGP_LPJ_P0081824 Apoe protein_coding protein_coding MGP_LPJ_T0083190.1 MGP_LPJ_G0032026.1 mouse_genomes_project 7 44189685 44190864 + MGP_LPJ_P0083190 Nkg7 protein_coding protein_coding MGP_LPJ_T0083191.1 MGP_LPJ_G0032026.1 mouse_genomes_project 7 44189742 44190861 + MGP_LPJ_P0083191 Nkg7 protein_coding protein_coding MGP_LPJ_T0083192.1 MGP_LPJ_G0032026.1 mouse_genomes_project 7 44190116 44190864 + Nkg7 protein_coding retained_intron MGP_LPJ_T0084316.1 MGP_LPJ_G0032299.1 mouse_genomes_project 7 82879558 82893932 - MGP_LPJ_P0084316 Plin1 protein_coding protein_coding MGP_LPJ_T0084317.1 MGP_LPJ_G0032299.1 mouse_genomes_project 7 82882347 82893316 - MGP_LPJ_P0084317 Plin1 protein_coding protein_coding MGP_LPJ_T0084318.1 MGP_LPJ_G0032299.1 mouse_genomes_project 7 82882347 82893921 - MGP_LPJ_P0084318 Plin1 protein_coding protein_coding MGP_LPJ_T0084319.1 MGP_LPJ_G0032299.1 mouse_genomes_project 7 82883564 82884472 - MGP_LPJ_P0084319 Plin1 protein_coding protein_coding MGP_LPJ_T0084320.1 MGP_LPJ_G0032299.1 mouse_genomes_project 7 82886249 82891010 - MGP_LPJ_P0084320 Plin1 protein_coding protein_coding MGP_LPJ_T0084321.1 MGP_LPJ_G0032299.1 mouse_genomes_project 7 82887670 82893980 - MGP_LPJ_P0084321 Plin1 protein_coding protein_coding MGP_LPJ_T0084322.1 MGP_LPJ_G0032299.1 mouse_genomes_project 7 82890127 82894048 - MGP_LPJ_P0084322 Plin1 protein_coding protein_coding MGP_LPJ_T0083554.1 MGP_LPJ_G0032126.1 mouse_genomes_project 7 46369126 46372599 + MGP_LPJ_P0083554 Ntf5 protein_coding protein_coding MGP_LPJ_T0002311.1 MGP_LPJ_G0002219.1 mouse_genomes_project 7 96437926 96438245 + TEC TEC MGP_LPJ_T0087023.1 MGP_LPJ_G0033044.1 mouse_genomes_project 7 140577654 140690419 - MGP_LPJ_P0087023 D7Ertd443e protein_coding protein_coding MGP_LPJ_T0087024.1 MGP_LPJ_G0033044.1 mouse_genomes_project 7 140577667 140666306 - MGP_LPJ_P0087024 D7Ertd443e protein_coding protein_coding MGP_LPJ_T0087025.1 MGP_LPJ_G0033044.1 mouse_genomes_project 7 140578005 140682570 - MGP_LPJ_P0087025 D7Ertd443e protein_coding protein_coding MGP_LPJ_T0087026.1 MGP_LPJ_G0033044.1 mouse_genomes_project 7 140578206 140580233 - D7Ertd443e protein_coding retained_intron MGP_LPJ_T0087027.1 MGP_LPJ_G0033044.1 mouse_genomes_project 7 140578206 140673236 - MGP_LPJ_P0087027 D7Ertd443e protein_coding protein_coding MGP_LPJ_T0087028.1 MGP_LPJ_G0033044.1 mouse_genomes_project 7 140673872 140702320 - MGP_LPJ_P0087028 D7Ertd443e protein_coding protein_coding MGP_LPJ_T0087029.1 MGP_LPJ_G0033044.1 mouse_genomes_project 7 140673993 140702314 - MGP_LPJ_P0087029 D7Ertd443e protein_coding protein_coding MGP_LPJ_T0087030.1 MGP_LPJ_G0033044.1 mouse_genomes_project 7 140678546 140711150 - D7Ertd443e protein_coding processed_transcript MGP_LPJ_T0101606.1 MGP_LPJ_G0039684.1 mouse_genomes_project 7 33065528 33085712 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101607.1 MGP_LPJ_G0039684.1 mouse_genomes_project 7 33065694 33066963 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0081355.1 MGP_LPJ_G0031548.1 mouse_genomes_project 7 9951764 9993294 + MGP_LPJ_P0081355 2900092C05Rik protein_coding protein_coding MGP_LPJ_T0100960.1 MGP_LPJ_G0039223.1 mouse_genomes_project 7 61282476 61282545 - Gm25499 snoRNA snoRNA MGP_LPJ_T0099722.1 MGP_LPJ_G0037985.1 mouse_genomes_project 7 95425956 95426101 - Gm23928 snRNA snRNA MGP_LPJ_T0015854.1 MGP_LPJ_G0013945.1 mouse_genomes_project 7 127643092 127643506 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102344.1 MGP_LPJ_G0040380.1 mouse_genomes_project 7 32968572 32969835 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0098665.1 MGP_LPJ_G0036935.1 mouse_genomes_project 7 34737194 34738338 - Gm44836 sense_intronic sense_intronic MGP_LPJ_T0081812.1 MGP_LPJ_G0031693.1 mouse_genomes_project 7 18029495 18032780 - MGP_LPJ_P0081812 Apoc4 protein_coding protein_coding MGP_LPJ_T0082961.1 MGP_LPJ_G0031975.1 mouse_genomes_project 7 33831564 33861866 - MGP_LPJ_P0082961 Gpi1 protein_coding protein_coding MGP_LPJ_T0082962.1 MGP_LPJ_G0031975.1 mouse_genomes_project 7 33832395 33840641 - Gpi1 protein_coding retained_intron MGP_LPJ_T0082963.1 MGP_LPJ_G0031975.1 mouse_genomes_project 7 33832442 33838163 - MGP_LPJ_P0082963 Gpi1 protein_coding nonsense_mediated_decay MGP_LPJ_T0082964.1 MGP_LPJ_G0031975.1 mouse_genomes_project 7 33832619 33843727 - MGP_LPJ_P0082964 Gpi1 protein_coding nonsense_mediated_decay MGP_LPJ_T0082965.1 MGP_LPJ_G0031975.1 mouse_genomes_project 7 33832643 33859186 - MGP_LPJ_P0082965 Gpi1 protein_coding protein_coding MGP_LPJ_T0082966.1 MGP_LPJ_G0031975.1 mouse_genomes_project 7 33832925 33861787 - MGP_LPJ_P0082966 Gpi1 protein_coding nonsense_mediated_decay MGP_LPJ_T0082967.1 MGP_LPJ_G0031975.1 mouse_genomes_project 7 33833047 33836529 - Gpi1 protein_coding retained_intron MGP_LPJ_T0082968.1 MGP_LPJ_G0031975.1 mouse_genomes_project 7 33834302 33861772 - MGP_LPJ_P0082968 Gpi1 protein_coding protein_coding MGP_LPJ_T0082969.1 MGP_LPJ_G0031975.1 mouse_genomes_project 7 33845499 33861793 - Gpi1 protein_coding retained_intron MGP_LPJ_T0082970.1 MGP_LPJ_G0031975.1 mouse_genomes_project 7 33857305 33861330 - Gpi1 protein_coding processed_transcript MGP_LPJ_T0082971.1 MGP_LPJ_G0031975.1 mouse_genomes_project 7 33860688 33861819 - Gpi1 protein_coding retained_intron MGP_LPJ_T0086015.1 MGP_LPJ_G0032853.1 mouse_genomes_project 7 126416489 126441247 - Cdr2 protein_coding processed_transcript MGP_LPJ_T0086016.1 MGP_LPJ_G0032853.1 mouse_genomes_project 7 126416489 126441769 - MGP_LPJ_P0086016 Cdr2 protein_coding protein_coding MGP_LPJ_T0081719.1 MGP_LPJ_G0031667.1 mouse_genomes_project 7 17478876 17512167 + MGP_LPJ_P0081719 Eml2 protein_coding protein_coding MGP_LPJ_T0081720.1 MGP_LPJ_G0031667.1 mouse_genomes_project 7 17485305 17512393 + MGP_LPJ_P0081720 Eml2 protein_coding protein_coding MGP_LPJ_T0081721.1 MGP_LPJ_G0031667.1 mouse_genomes_project 7 17485316 17512389 + MGP_LPJ_P0081721 Eml2 protein_coding nonsense_mediated_decay MGP_LPJ_T0081722.1 MGP_LPJ_G0031667.1 mouse_genomes_project 7 17485339 17512390 + MGP_LPJ_P0081722 Eml2 protein_coding protein_coding MGP_LPJ_T0081723.1 MGP_LPJ_G0031667.1 mouse_genomes_project 7 17485351 17489132 + MGP_LPJ_P0081723 Eml2 protein_coding protein_coding MGP_LPJ_T0081724.1 MGP_LPJ_G0031667.1 mouse_genomes_project 7 17485372 17490570 + MGP_LPJ_P0081724 Eml2 protein_coding protein_coding MGP_LPJ_T0081725.1 MGP_LPJ_G0031667.1 mouse_genomes_project 7 17485466 17489135 + Eml2 protein_coding processed_transcript MGP_LPJ_T0081726.1 MGP_LPJ_G0031667.1 mouse_genomes_project 7 17485740 17490583 + Eml2 protein_coding retained_intron MGP_LPJ_T0086235.1 MGP_LPJ_G0032897.1 mouse_genomes_project 7 132185975 132203236 - MGP_LPJ_P0086235 Atp2a1 protein_coding protein_coding MGP_LPJ_T0086236.1 MGP_LPJ_G0032897.1 mouse_genomes_project 7 132185977 132187763 - MGP_LPJ_P0086236 Atp2a1 protein_coding protein_coding MGP_LPJ_T0086237.1 MGP_LPJ_G0032897.1 mouse_genomes_project 7 132186218 132204094 - MGP_LPJ_P0086237 Atp2a1 protein_coding unknown_likely_coding MGP_LPJ_T0083098.1 MGP_LPJ_G0031999.1 mouse_genomes_project 7 37327491 37335317 - MGP_LPJ_P0083098 Zfp536 protein_coding protein_coding MGP_LPJ_T0083099.1 MGP_LPJ_G0031999.1 mouse_genomes_project 7 37334440 37638134 - MGP_LPJ_P0083099 Zfp536 protein_coding protein_coding MGP_LPJ_T0083100.1 MGP_LPJ_G0031999.1 mouse_genomes_project 7 37334445 37638473 - MGP_LPJ_P0083100 Zfp536 protein_coding protein_coding MGP_LPJ_T0083101.1 MGP_LPJ_G0031999.1 mouse_genomes_project 7 37334458 37639491 - MGP_LPJ_P0083101 Zfp536 protein_coding protein_coding MGP_LPJ_T0083102.1 MGP_LPJ_G0031999.1 mouse_genomes_project 7 37334513 37646638 - MGP_LPJ_P0083102 Zfp536 protein_coding protein_coding MGP_LPJ_T0083103.1 MGP_LPJ_G0031999.1 mouse_genomes_project 7 37428153 37639293 - MGP_LPJ_P0083103 Zfp536 protein_coding protein_coding MGP_LPJ_T0083104.1 MGP_LPJ_G0031999.1 mouse_genomes_project 7 37428283 37647404 - MGP_LPJ_P0083104 Zfp536 protein_coding protein_coding MGP_LPJ_T0083105.1 MGP_LPJ_G0031999.1 mouse_genomes_project 7 37577992 37647340 - Zfp536 protein_coding processed_transcript MGP_LPJ_T0083106.1 MGP_LPJ_G0031999.1 mouse_genomes_project 7 37584238 37647325 - Zfp536 protein_coding retained_intron MGP_LPJ_T0083107.1 MGP_LPJ_G0031999.1 mouse_genomes_project 7 37646144 37647346 - Zfp536 protein_coding retained_intron MGP_LPJ_T0084837.1 MGP_LPJ_G0032440.1 mouse_genomes_project 7 101963985 102091936 + MGP_LPJ_P0084837 Gdpd4 protein_coding protein_coding MGP_LPJ_T0084838.1 MGP_LPJ_G0032440.1 mouse_genomes_project 7 101999555 102090969 + MGP_LPJ_P0084838 Gdpd4 protein_coding protein_coding MGP_LPJ_T0084939.1 MGP_LPJ_G0032465.1 mouse_genomes_project 7 103997888 104020892 - MGP_LPJ_P0084939 Neu3 protein_coding protein_coding MGP_LPJ_T0087178.1 MGP_LPJ_G0033096.1 mouse_genomes_project 7 147119154 147120145 + MGP_LPJ_P0087178 Olfr535 protein_coding protein_coding MGP_LPJ_T0010869.1 MGP_LPJ_G0008987.1 mouse_genomes_project 7 25362458 25362568 + Gm25947 miRNA miRNA MGP_LPJ_T0005177.1 MGP_LPJ_G0004411.1 mouse_genomes_project 7 16143246 16267976 - antisense antisense MGP_LPJ_T0005178.1 MGP_LPJ_G0004411.1 mouse_genomes_project 7 16146602 16268020 - antisense antisense MGP_LPJ_T0099720.1 MGP_LPJ_G0037983.1 mouse_genomes_project 7 94970570 94970673 + Gm24552 snRNA snRNA MGP_LPJ_T0010919.1 MGP_LPJ_G0009037.1 mouse_genomes_project 7 67365093 67365171 - Gm25249 miRNA miRNA MGP_LPJ_T0005297.1 MGP_LPJ_G0004496.1 mouse_genomes_project 7 117610769 117619482 - Parvaos antisense antisense MGP_LPJ_T0099699.1 MGP_LPJ_G0037962.1 mouse_genomes_project 7 17550594 17550754 + Gm25134 snRNA snRNA MGP_LPJ_T0102348.1 MGP_LPJ_G0040384.1 mouse_genomes_project 7 33065694 33066963 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008812.1 MGP_LPJ_G0007118.1 mouse_genomes_project 7 953349 957345 - Gm44581 lincRNA lincRNA MGP_LPJ_T0081668.1 MGP_LPJ_G0031654.1 mouse_genomes_project 7 17275982 17286285 + MGP_LPJ_P0081668 Mypop protein_coding protein_coding MGP_LPJ_T0081669.1 MGP_LPJ_G0031654.1 mouse_genomes_project 7 17276056 17286287 + MGP_LPJ_P0081669 Mypop protein_coding protein_coding MGP_LPJ_T0081670.1 MGP_LPJ_G0031654.1 mouse_genomes_project 7 17276708 17277840 + Mypop protein_coding retained_intron MGP_LPJ_T0005198.1 MGP_LPJ_G0004425.1 mouse_genomes_project 7 25690013 25692879 - Gm44963 antisense antisense MGP_LPJ_T0086178.1 MGP_LPJ_G0032890.1 mouse_genomes_project 7 131793783 131848990 - MGP_LPJ_P0086178 Xpo6 protein_coding unknown_likely_coding MGP_LPJ_T0086179.1 MGP_LPJ_G0032890.1 mouse_genomes_project 7 131794990 131905434 - MGP_LPJ_P0086179 Xpo6 protein_coding protein_coding MGP_LPJ_T0086180.1 MGP_LPJ_G0032890.1 mouse_genomes_project 7 131794991 131905341 - MGP_LPJ_P0086180 Xpo6 protein_coding protein_coding MGP_LPJ_T0086181.1 MGP_LPJ_G0032890.1 mouse_genomes_project 7 131794996 131804460 - Xpo6 protein_coding retained_intron MGP_LPJ_T0086182.1 MGP_LPJ_G0032890.1 mouse_genomes_project 7 131794996 131860443 - Xpo6 protein_coding processed_transcript MGP_LPJ_T0086183.1 MGP_LPJ_G0032890.1 mouse_genomes_project 7 131794996 131799217 - MGP_LPJ_P0086183 Xpo6 protein_coding nonsense_mediated_decay MGP_LPJ_T0086184.1 MGP_LPJ_G0032890.1 mouse_genomes_project 7 131795009 131801575 - MGP_LPJ_P0086184 Xpo6 protein_coding nonsense_mediated_decay MGP_LPJ_T0086185.1 MGP_LPJ_G0032890.1 mouse_genomes_project 7 131795344 131799430 - Xpo6 protein_coding retained_intron MGP_LPJ_T0086186.1 MGP_LPJ_G0032890.1 mouse_genomes_project 7 131795621 131801538 - MGP_LPJ_P0086186 Xpo6 protein_coding nonsense_mediated_decay MGP_LPJ_T0086187.1 MGP_LPJ_G0032890.1 mouse_genomes_project 7 131799165 131807323 - MGP_LPJ_P0086187 Xpo6 protein_coding nonsense_mediated_decay MGP_LPJ_T0086188.1 MGP_LPJ_G0032890.1 mouse_genomes_project 7 131802929 131807255 - MGP_LPJ_P0086188 Xpo6 protein_coding protein_coding MGP_LPJ_T0086189.1 MGP_LPJ_G0032890.1 mouse_genomes_project 7 131807328 131836279 - MGP_LPJ_P0086189 Xpo6 protein_coding nonsense_mediated_decay MGP_LPJ_T0086190.1 MGP_LPJ_G0032890.1 mouse_genomes_project 7 131814133 131905355 - Xpo6 protein_coding retained_intron MGP_LPJ_T0086191.1 MGP_LPJ_G0032890.1 mouse_genomes_project 7 131823896 131851669 - MGP_LPJ_P0086191 Xpo6 protein_coding nonsense_mediated_decay MGP_LPJ_T0086192.1 MGP_LPJ_G0032890.1 mouse_genomes_project 7 131836259 131860584 - MGP_LPJ_P0086192 Xpo6 protein_coding protein_coding MGP_LPJ_T0086193.1 MGP_LPJ_G0032890.1 mouse_genomes_project 7 131847929 131860592 - Xpo6 protein_coding processed_transcript MGP_LPJ_T0086194.1 MGP_LPJ_G0032890.1 mouse_genomes_project 7 131850321 131905275 - Xpo6 protein_coding processed_transcript MGP_LPJ_T0086195.1 MGP_LPJ_G0032890.1 mouse_genomes_project 7 131850890 131904834 - MGP_LPJ_P0086195 Xpo6 protein_coding protein_coding MGP_LPJ_T0086196.1 MGP_LPJ_G0032890.1 mouse_genomes_project 7 131860579 131904861 - MGP_LPJ_P0086196 Xpo6 protein_coding nonsense_mediated_decay MGP_LPJ_T0086197.1 MGP_LPJ_G0032890.1 mouse_genomes_project 7 131870153 131883793 - Xpo6 protein_coding processed_transcript MGP_LPJ_T0086198.1 MGP_LPJ_G0032890.1 mouse_genomes_project 7 131881924 131889752 - Xpo6 protein_coding retained_intron MGP_LPJ_T0100995.1 MGP_LPJ_G0039258.1 mouse_genomes_project 7 124166492 124166606 + Gm26147 snoRNA snoRNA MGP_LPJ_T0085009.1 MGP_LPJ_G0032483.1 mouse_genomes_project 7 104886524 104900396 - MGP_LPJ_P0085009 Plekhb1 protein_coding protein_coding MGP_LPJ_T0085010.1 MGP_LPJ_G0032483.1 mouse_genomes_project 7 104887502 104900423 - MGP_LPJ_P0085010 Plekhb1 protein_coding protein_coding MGP_LPJ_T0085011.1 MGP_LPJ_G0032483.1 mouse_genomes_project 7 104887502 104905849 - MGP_LPJ_P0085011 Plekhb1 protein_coding protein_coding MGP_LPJ_T0085012.1 MGP_LPJ_G0032483.1 mouse_genomes_project 7 104887502 104905800 - MGP_LPJ_P0085012 Plekhb1 protein_coding protein_coding MGP_LPJ_T0085013.1 MGP_LPJ_G0032483.1 mouse_genomes_project 7 104887506 104901899 - MGP_LPJ_P0085013 Plekhb1 protein_coding protein_coding MGP_LPJ_T0085014.1 MGP_LPJ_G0032483.1 mouse_genomes_project 7 104887506 104901899 - MGP_LPJ_P0085014 Plekhb1 protein_coding protein_coding MGP_LPJ_T0085015.1 MGP_LPJ_G0032483.1 mouse_genomes_project 7 104888249 104901807 - MGP_LPJ_P0085015 Plekhb1 protein_coding protein_coding MGP_LPJ_T0085016.1 MGP_LPJ_G0032483.1 mouse_genomes_project 7 104888410 104897234 - Plekhb1 protein_coding retained_intron MGP_LPJ_T0085017.1 MGP_LPJ_G0032483.1 mouse_genomes_project 7 104888552 104905750 - MGP_LPJ_P0085017 Plekhb1 protein_coding protein_coding MGP_LPJ_T0085018.1 MGP_LPJ_G0032483.1 mouse_genomes_project 7 104889174 104900546 - MGP_LPJ_P0085018 Plekhb1 protein_coding protein_coding MGP_LPJ_T0085019.1 MGP_LPJ_G0032483.1 mouse_genomes_project 7 104889242 104901865 - MGP_LPJ_P0085019 Plekhb1 protein_coding protein_coding MGP_LPJ_T0087209.1 MGP_LPJ_G0033113.1 mouse_genomes_project 7 147500643 147518845 - MGP_LPJ_P0087209 Sirt3 protein_coding protein_coding MGP_LPJ_T0087210.1 MGP_LPJ_G0033113.1 mouse_genomes_project 7 147500643 147519285 - MGP_LPJ_P0087210 Sirt3 protein_coding protein_coding MGP_LPJ_T0087211.1 MGP_LPJ_G0033113.1 mouse_genomes_project 7 147501993 147515123 - MGP_LPJ_P0087211 Sirt3 protein_coding protein_coding MGP_LPJ_T0087212.1 MGP_LPJ_G0033113.1 mouse_genomes_project 7 147506462 147518845 - MGP_LPJ_P0087212 Sirt3 protein_coding protein_coding MGP_LPJ_T0087213.1 MGP_LPJ_G0033113.1 mouse_genomes_project 7 147513409 147518845 - MGP_LPJ_P0087213 Sirt3 protein_coding protein_coding MGP_LPJ_T0082201.1 MGP_LPJ_G0031803.1 mouse_genomes_project 7 26138937 26140344 - MGP_LPJ_P0082201 Mia protein_coding protein_coding MGP_LPJ_T0082202.1 MGP_LPJ_G0031803.1 mouse_genomes_project 7 26138939 26140322 - Mia protein_coding retained_intron MGP_LPJ_T0082203.1 MGP_LPJ_G0031803.1 mouse_genomes_project 7 26138939 26140352 - MGP_LPJ_P0082203 Mia protein_coding protein_coding MGP_LPJ_T0082204.1 MGP_LPJ_G0031803.1 mouse_genomes_project 7 26139684 26140191 - Mia protein_coding processed_transcript MGP_LPJ_T0085287.1 MGP_LPJ_G0032590.1 mouse_genomes_project 7 108300162 108301125 - MGP_LPJ_P0085287 Olfr67 protein_coding protein_coding MGP_LPJ_T0087318.1 MGP_LPJ_G0033140.1 mouse_genomes_project 7 148007458 148012997 + Tmem80 protein_coding processed_transcript MGP_LPJ_T0087319.1 MGP_LPJ_G0033140.1 mouse_genomes_project 7 148007607 148016867 + MGP_LPJ_P0087319 Tmem80 protein_coding protein_coding MGP_LPJ_T0087320.1 MGP_LPJ_G0033140.1 mouse_genomes_project 7 148007607 148015928 + MGP_LPJ_P0087320 Tmem80 protein_coding protein_coding MGP_LPJ_T0087321.1 MGP_LPJ_G0033140.1 mouse_genomes_project 7 148007849 148016522 + MGP_LPJ_P0087321 Tmem80 protein_coding protein_coding MGP_LPJ_T0087322.1 MGP_LPJ_G0033140.1 mouse_genomes_project 7 148007849 148016867 + MGP_LPJ_P0087322 Tmem80 protein_coding protein_coding MGP_LPJ_T0087323.1 MGP_LPJ_G0033140.1 mouse_genomes_project 7 148007879 148013038 + Tmem80 protein_coding processed_transcript MGP_LPJ_T0087324.1 MGP_LPJ_G0033140.1 mouse_genomes_project 7 148013024 148016524 + MGP_LPJ_P0087324 Tmem80 protein_coding protein_coding MGP_LPJ_T0087325.1 MGP_LPJ_G0033140.1 mouse_genomes_project 7 148013091 148015778 + MGP_LPJ_P0087325 Tmem80 protein_coding protein_coding MGP_LPJ_T0087326.1 MGP_LPJ_G0033140.1 mouse_genomes_project 7 148013368 148015858 + Tmem80 protein_coding retained_intron MGP_LPJ_T0084144.1 MGP_LPJ_G0032269.1 mouse_genomes_project 7 70748538 70782634 - MGP_LPJ_P0084144 Pgpep1l protein_coding protein_coding MGP_LPJ_T0085516.1 MGP_LPJ_G0032700.1 mouse_genomes_project 7 111960550 111962288 - MGP_LPJ_P0085516 Olfr2 protein_coding protein_coding MGP_LPJ_T0087258.1 MGP_LPJ_G0033127.1 mouse_genomes_project 7 147756682 147773272 - MGP_LPJ_P0087258 Ano9 protein_coding protein_coding MGP_LPJ_T0099711.1 MGP_LPJ_G0037974.1 mouse_genomes_project 7 57557023 57557085 + Gm26482 snRNA snRNA MGP_LPJ_T0015839.1 MGP_LPJ_G0013930.1 mouse_genomes_project 7 110543798 110545247 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102365.1 MGP_LPJ_G0040401.1 mouse_genomes_project 7 41054754 41057378 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0087268.1 MGP_LPJ_G0033129.1 mouse_genomes_project 7 147824613 147833222 - MGP_LPJ_P0087268 Rnh1 protein_coding protein_coding MGP_LPJ_T0087269.1 MGP_LPJ_G0033129.1 mouse_genomes_project 7 147824613 147837137 - MGP_LPJ_P0087269 Rnh1 protein_coding protein_coding MGP_LPJ_T0002303.1 MGP_LPJ_G0002211.1 mouse_genomes_project 7 82747116 82750090 - TEC TEC MGP_LPJ_T0085005.1 MGP_LPJ_G0032482.1 mouse_genomes_project 7 104847841 104884902 + MGP_LPJ_P0085005 Rab6a protein_coding protein_coding MGP_LPJ_T0085006.1 MGP_LPJ_G0032482.1 mouse_genomes_project 7 104848018 104884902 + MGP_LPJ_P0085006 Rab6a protein_coding protein_coding MGP_LPJ_T0085007.1 MGP_LPJ_G0032482.1 mouse_genomes_project 7 104848122 104884902 + MGP_LPJ_P0085007 Rab6a protein_coding protein_coding MGP_LPJ_T0085008.1 MGP_LPJ_G0032482.1 mouse_genomes_project 7 104877912 104883001 + Rab6a protein_coding retained_intron MGP_LPJ_T0087180.1 MGP_LPJ_G0033098.1 mouse_genomes_project 7 147201103 147202534 + MGP_LPJ_P0087180 protein_coding protein_coding MGP_LPJ_T0084685.1 MGP_LPJ_G0032405.1 mouse_genomes_project 7 93272951 93273979 - MGP_LPJ_P0084685 protein_coding protein_coding MGP_LPJ_T0081304.1 MGP_LPJ_G0031515.1 mouse_genomes_project 7 3724842 3725896 - MGP_LPJ_P0081304 Olfr1349 protein_coding protein_coding MGP_LPJ_T0087196.1 MGP_LPJ_G0033109.1 mouse_genomes_project 7 147481062 147482285 + MGP_LPJ_P0087196 Scgb1c1 protein_coding protein_coding MGP_LPJ_T0015717.1 MGP_LPJ_G0013808.1 mouse_genomes_project 7 33600766 33600909 - processed_pseudogene processed_pseudogene MGP_LPJ_T0082587.1 MGP_LPJ_G0031899.1 mouse_genomes_project 7 29341274 29344508 - Zfp82 protein_coding retained_intron MGP_LPJ_T0082588.1 MGP_LPJ_G0031899.1 mouse_genomes_project 7 29342772 29363427 - MGP_LPJ_P0082588 Zfp82 protein_coding protein_coding MGP_LPJ_T0082590.1 MGP_LPJ_G0031899.1 mouse_genomes_project 7 29342779 29349024 - Zfp82 protein_coding retained_intron MGP_LPJ_T0082591.1 MGP_LPJ_G0031899.1 mouse_genomes_project 7 29342781 29363493 - MGP_LPJ_P0082591 Zfp82 protein_coding protein_coding MGP_LPJ_T0082592.1 MGP_LPJ_G0031899.1 mouse_genomes_project 7 29344014 29364159 - MGP_LPJ_P0082592 Zfp82 protein_coding protein_coding MGP_LPJ_T0082593.1 MGP_LPJ_G0031899.1 mouse_genomes_project 7 29345956 29364177 - MGP_LPJ_P0082593 Zfp82 protein_coding protein_coding MGP_LPJ_T0100945.1 MGP_LPJ_G0039208.1 mouse_genomes_project 7 27456850 27456975 + AF357399 snoRNA snoRNA MGP_LPJ_T0084955.1 MGP_LPJ_G0032471.1 mouse_genomes_project 7 104380779 104382805 + MGP_LPJ_P0084955 Lipt2 protein_coding protein_coding MGP_LPJ_T0083835.1 MGP_LPJ_G0032205.1 mouse_genomes_project 7 51245743 51251067 - MGP_LPJ_P0083835 Dbx1 protein_coding protein_coding MGP_LPJ_T0084774.1 MGP_LPJ_G0032428.1 mouse_genomes_project 7 101315459 101337686 - MGP_LPJ_P0084774 Usp35 protein_coding protein_coding MGP_LPJ_T0084775.1 MGP_LPJ_G0032428.1 mouse_genomes_project 7 101315459 101331629 - MGP_LPJ_P0084775 Usp35 protein_coding protein_coding MGP_LPJ_T0084776.1 MGP_LPJ_G0032428.1 mouse_genomes_project 7 101315485 101322074 - Usp35 protein_coding processed_transcript MGP_LPJ_T0084777.1 MGP_LPJ_G0032428.1 mouse_genomes_project 7 101318552 101321105 - Usp35 protein_coding retained_intron MGP_LPJ_T0084778.1 MGP_LPJ_G0032428.1 mouse_genomes_project 7 101318667 101322075 - Usp35 protein_coding processed_transcript MGP_LPJ_T0084779.1 MGP_LPJ_G0032428.1 mouse_genomes_project 7 101325268 101330058 - Usp35 protein_coding retained_intron MGP_LPJ_T0081787.1 MGP_LPJ_G0031685.1 mouse_genomes_project 7 17858155 17864483 + MGP_LPJ_P0081787 Nkpd1 protein_coding protein_coding MGP_LPJ_T0083721.1 MGP_LPJ_G0032170.1 mouse_genomes_project 7 47442714 47445318 + MGP_LPJ_P0083721 Myod1 protein_coding protein_coding MGP_LPJ_T0101407.1 MGP_LPJ_G0039585.1 mouse_genomes_project 7 131864906 131869289 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101408.1 MGP_LPJ_G0039585.1 mouse_genomes_project 7 131866530 131867487 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0005281.1 MGP_LPJ_G0004485.1 mouse_genomes_project 7 100581051 100616127 - Gm15414 antisense antisense MGP_LPJ_T0015852.1 MGP_LPJ_G0013943.1 mouse_genomes_project 7 126475193 126477504 - processed_pseudogene processed_pseudogene MGP_LPJ_T0081424.1 MGP_LPJ_G0031570.1 mouse_genomes_project 7 10690243 10691194 + MGP_LPJ_P0081424 Vmn1r88 protein_coding protein_coding MGP_LPJ_T0009068.1 MGP_LPJ_G0007297.1 mouse_genomes_project 7 141564299 141568274 - 1700120G07Rik lincRNA lincRNA MGP_LPJ_T0009069.1 MGP_LPJ_G0007297.1 mouse_genomes_project 7 141565436 141568274 - 1700120G07Rik lincRNA lincRNA MGP_LPJ_T0083141.1 MGP_LPJ_G0032009.1 mouse_genomes_project 7 41592491 41621400 - MGP_LPJ_P0083141 AI987944 protein_coding protein_coding MGP_LPJ_T0083142.1 MGP_LPJ_G0032009.1 mouse_genomes_project 7 41592491 41621348 - MGP_LPJ_P0083142 AI987944 protein_coding protein_coding MGP_LPJ_T0083143.1 MGP_LPJ_G0032009.1 mouse_genomes_project 7 41593201 41621467 - MGP_LPJ_P0083143 AI987944 protein_coding protein_coding MGP_LPJ_T0087562.1 MGP_LPJ_G0033181.1 mouse_genomes_project 7 149682674 149723824 - MGP_LPJ_P0087562 Th protein_coding protein_coding MGP_LPJ_T0087563.1 MGP_LPJ_G0033181.1 mouse_genomes_project 7 149682674 149689933 - MGP_LPJ_P0087563 Th protein_coding protein_coding MGP_LPJ_T0087564.1 MGP_LPJ_G0033181.1 mouse_genomes_project 7 149682888 149689880 - MGP_LPJ_P0087564 Th protein_coding nonsense_mediated_decay MGP_LPJ_T0087565.1 MGP_LPJ_G0033181.1 mouse_genomes_project 7 149684324 149686528 - MGP_LPJ_P0087565 Th protein_coding nonsense_mediated_decay MGP_LPJ_T0087566.1 MGP_LPJ_G0033181.1 mouse_genomes_project 7 149684352 149689885 - MGP_LPJ_P0087566 Th protein_coding nonsense_mediated_decay MGP_LPJ_T0087567.1 MGP_LPJ_G0033181.1 mouse_genomes_project 7 149686516 149723816 - MGP_LPJ_P0087567 Th protein_coding protein_coding MGP_LPJ_T0098051.1 MGP_LPJ_G0036332.1 mouse_genomes_project 7 74013063 74013622 - pseudogene pseudogene MGP_LPJ_T0018362.1 MGP_LPJ_G0015606.1 mouse_genomes_project 7 129560173 129569984 - Gm26974 processed_transcript lincRNA MGP_LPJ_T0018363.1 MGP_LPJ_G0015606.1 mouse_genomes_project 7 129567614 129569598 - Gm26974 processed_transcript lincRNA MGP_LPJ_T0018364.1 MGP_LPJ_G0015606.1 mouse_genomes_project 7 129567616 129569102 - Gm26974 processed_transcript retained_intron MGP_LPJ_T0002246.1 MGP_LPJ_G0002155.1 mouse_genomes_project 7 40853958 40855364 - TEC TEC MGP_LPJ_T0084037.1 MGP_LPJ_G0032250.1 mouse_genomes_project 7 68119668 68132031 + MGP_LPJ_P0084037 Tm2d3 protein_coding protein_coding MGP_LPJ_T0084038.1 MGP_LPJ_G0032250.1 mouse_genomes_project 7 68121907 68132022 + MGP_LPJ_P0084038 Tm2d3 protein_coding protein_coding MGP_LPJ_T0084039.1 MGP_LPJ_G0032250.1 mouse_genomes_project 7 68121916 68132033 + MGP_LPJ_P0084039 Tm2d3 protein_coding protein_coding MGP_LPJ_T0084040.1 MGP_LPJ_G0032250.1 mouse_genomes_project 7 68121946 68127852 + MGP_LPJ_P0084040 Tm2d3 protein_coding protein_coding MGP_LPJ_T0084041.1 MGP_LPJ_G0032250.1 mouse_genomes_project 7 68121966 68127999 + MGP_LPJ_P0084041 Tm2d3 protein_coding protein_coding MGP_LPJ_T0084042.1 MGP_LPJ_G0032250.1 mouse_genomes_project 7 68121975 68132020 + MGP_LPJ_P0084042 Tm2d3 protein_coding nonsense_mediated_decay MGP_LPJ_T0084043.1 MGP_LPJ_G0032250.1 mouse_genomes_project 7 68121976 68132022 + MGP_LPJ_P0084043 Tm2d3 protein_coding protein_coding MGP_LPJ_T0084044.1 MGP_LPJ_G0032250.1 mouse_genomes_project 7 68121980 68123727 + MGP_LPJ_P0084044 Tm2d3 protein_coding protein_coding MGP_LPJ_T0084045.1 MGP_LPJ_G0032250.1 mouse_genomes_project 7 68122023 68129272 + MGP_LPJ_P0084045 Tm2d3 protein_coding protein_coding MGP_LPJ_T0084046.1 MGP_LPJ_G0032250.1 mouse_genomes_project 7 68122023 68127994 + MGP_LPJ_P0084046 Tm2d3 protein_coding protein_coding MGP_LPJ_T0083808.1 MGP_LPJ_G0032200.1 mouse_genomes_project 7 50208963 50209972 - MGP_LPJ_P0083808 Mrgprb3 protein_coding protein_coding MGP_LPJ_T0085517.1 MGP_LPJ_G0032701.1 mouse_genomes_project 7 111997488 111998463 + MGP_LPJ_P0085517 Olfr713 protein_coding protein_coding MGP_LPJ_T0085510.1 MGP_LPJ_G0032694.1 mouse_genomes_project 7 111863026 111864048 - MGP_LPJ_P0085510 protein_coding protein_coding MGP_LPJ_T0002272.1 MGP_LPJ_G0002181.1 mouse_genomes_project 7 66926113 66926585 + TEC TEC MGP_LPJ_T0102310.1 MGP_LPJ_G0040347.1 mouse_genomes_project 7 9828006 9828618 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0018270.1 MGP_LPJ_G0015569.1 mouse_genomes_project 7 564316 576838 - Gm15927 processed_transcript antisense MGP_LPJ_T0018271.1 MGP_LPJ_G0015569.1 mouse_genomes_project 7 574506 575453 - Gm15927 processed_transcript antisense MGP_LPJ_T0018272.1 MGP_LPJ_G0015569.1 mouse_genomes_project 7 574507 576806 - Gm15927 processed_transcript retained_intron MGP_LPJ_T0018273.1 MGP_LPJ_G0015569.1 mouse_genomes_project 7 576300 576779 - Gm15927 processed_transcript processed_transcript MGP_LPJ_T0018274.1 MGP_LPJ_G0015569.1 mouse_genomes_project 7 576515 577089 - Gm15927 processed_transcript processed_transcript MGP_LPJ_T0008971.1 MGP_LPJ_G0007234.1 mouse_genomes_project 7 86200637 86208734 + 1700010L04Rik lincRNA lincRNA MGP_LPJ_T0008972.1 MGP_LPJ_G0007234.1 mouse_genomes_project 7 86205142 86208733 + 1700010L04Rik lincRNA lincRNA MGP_LPJ_T0008973.1 MGP_LPJ_G0007234.1 mouse_genomes_project 7 86205152 86208289 + 1700010L04Rik lincRNA lincRNA MGP_LPJ_T0002334.1 MGP_LPJ_G0002242.1 mouse_genomes_project 7 133073943 133075995 + TEC TEC MGP_LPJ_T0010870.1 MGP_LPJ_G0008988.1 mouse_genomes_project 7 26134276 26134364 - Mir3101 miRNA miRNA MGP_LPJ_T0085888.1 MGP_LPJ_G0032820.1 mouse_genomes_project 7 124038408 124065339 + MGP_LPJ_P0085888 Ccp110 protein_coding protein_coding MGP_LPJ_T0085889.1 MGP_LPJ_G0032820.1 mouse_genomes_project 7 124041278 124065336 + MGP_LPJ_P0085889 Ccp110 protein_coding protein_coding MGP_LPJ_T0085890.1 MGP_LPJ_G0032820.1 mouse_genomes_project 7 124049929 124065331 + Ccp110 protein_coding retained_intron MGP_LPJ_T0085891.1 MGP_LPJ_G0032820.1 mouse_genomes_project 7 124054259 124065339 + Ccp110 protein_coding retained_intron MGP_LPJ_T0085892.1 MGP_LPJ_G0032820.1 mouse_genomes_project 7 124058561 124060777 + Ccp110 protein_coding retained_intron MGP_LPJ_T0086035.1 MGP_LPJ_G0032862.1 mouse_genomes_project 7 127361958 127422915 + MGP_LPJ_P0086035 Scnn1b protein_coding protein_coding MGP_LPJ_T0086036.1 MGP_LPJ_G0032862.1 mouse_genomes_project 7 127361997 127422917 + MGP_LPJ_P0086036 Scnn1b protein_coding nonsense_mediated_decay MGP_LPJ_T0086039.1 MGP_LPJ_G0032862.1 mouse_genomes_project 7 127399925 127416502 + MGP_LPJ_P0086039 Scnn1b protein_coding protein_coding MGP_LPJ_T0087301.1 MGP_LPJ_G0033135.1 mouse_genomes_project 7 147940989 147944705 - MGP_LPJ_P0087301 Irf7 protein_coding protein_coding MGP_LPJ_T0087302.1 MGP_LPJ_G0033135.1 mouse_genomes_project 7 147941466 147944765 - MGP_LPJ_P0087302 Irf7 protein_coding protein_coding MGP_LPJ_T0087303.1 MGP_LPJ_G0033135.1 mouse_genomes_project 7 147941467 147944707 - MGP_LPJ_P0087303 Irf7 protein_coding protein_coding MGP_LPJ_T0087304.1 MGP_LPJ_G0033135.1 mouse_genomes_project 7 147941470 147944706 - Irf7 protein_coding retained_intron MGP_LPJ_T0087305.1 MGP_LPJ_G0033135.1 mouse_genomes_project 7 147941715 147943576 - MGP_LPJ_P0087305 Irf7 protein_coding protein_coding MGP_LPJ_T0087306.1 MGP_LPJ_G0033135.1 mouse_genomes_project 7 147942074 147943415 - Irf7 protein_coding retained_intron MGP_LPJ_T0087307.1 MGP_LPJ_G0033135.1 mouse_genomes_project 7 147942256 147944328 - Irf7 protein_coding processed_transcript MGP_LPJ_T0087308.1 MGP_LPJ_G0033135.1 mouse_genomes_project 7 147942506 147943757 - Irf7 protein_coding retained_intron MGP_LPJ_T0087309.1 MGP_LPJ_G0033135.1 mouse_genomes_project 7 147943083 147943991 - Irf7 protein_coding retained_intron MGP_LPJ_T0087310.1 MGP_LPJ_G0033135.1 mouse_genomes_project 7 147943498 147944268 - Irf7 protein_coding retained_intron MGP_LPJ_T0087311.1 MGP_LPJ_G0033135.1 mouse_genomes_project 7 147943659 147944705 - Irf7 protein_coding processed_transcript MGP_LPJ_T0083570.1 MGP_LPJ_G0032132.1 mouse_genomes_project 7 46437739 46459532 - MGP_LPJ_P0083570 Dhdh protein_coding protein_coding MGP_LPJ_T0083571.1 MGP_LPJ_G0032132.1 mouse_genomes_project 7 46440578 46445653 - Dhdh protein_coding processed_transcript MGP_LPJ_T0083383.1 MGP_LPJ_G0032079.1 mouse_genomes_project 7 45470158 45532635 - MGP_LPJ_P0083383 Myh14 protein_coding protein_coding MGP_LPJ_T0083384.1 MGP_LPJ_G0032079.1 mouse_genomes_project 7 45470158 45532635 - MGP_LPJ_P0083384 Myh14 protein_coding protein_coding MGP_LPJ_T0098668.1 MGP_LPJ_G0036938.1 mouse_genomes_project 7 92986687 93019241 - sense_intronic sense_intronic MGP_LPJ_T0085275.1 MGP_LPJ_G0032578.1 mouse_genomes_project 7 108104394 108105357 + MGP_LPJ_P0085275 Olfr619 protein_coding protein_coding MGP_LPJ_T0083731.1 MGP_LPJ_G0032173.1 mouse_genomes_project 7 47723786 47743615 - MGP_LPJ_P0083731 Tph1 protein_coding protein_coding MGP_LPJ_T0083732.1 MGP_LPJ_G0032173.1 mouse_genomes_project 7 47723817 47748757 - MGP_LPJ_P0083732 Tph1 protein_coding protein_coding MGP_LPJ_T0083733.1 MGP_LPJ_G0032173.1 mouse_genomes_project 7 47724082 47741539 - MGP_LPJ_P0083733 Tph1 protein_coding nonsense_mediated_decay MGP_LPJ_T0083734.1 MGP_LPJ_G0032173.1 mouse_genomes_project 7 47724082 47741526 - MGP_LPJ_P0083734 Tph1 protein_coding nonsense_mediated_decay MGP_LPJ_T0083735.1 MGP_LPJ_G0032173.1 mouse_genomes_project 7 47726074 47727757 - Tph1 protein_coding retained_intron MGP_LPJ_T0083736.1 MGP_LPJ_G0032173.1 mouse_genomes_project 7 47733114 47736910 - Tph1 protein_coding retained_intron MGP_LPJ_T0083737.1 MGP_LPJ_G0032173.1 mouse_genomes_project 7 47736261 47738553 - Tph1 protein_coding retained_intron MGP_LPJ_T0083738.1 MGP_LPJ_G0032173.1 mouse_genomes_project 7 47736579 47743581 - MGP_LPJ_P0083738 Tph1 protein_coding protein_coding MGP_LPJ_T0082939.1 MGP_LPJ_G0031969.1 mouse_genomes_project 7 33442969 33445005 - MGP_LPJ_P0082939 Scgb2b26 protein_coding protein_coding MGP_LPJ_T0015742.1 MGP_LPJ_G0013833.1 mouse_genomes_project 7 43303554 43304065 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002236.1 MGP_LPJ_G0002145.1 mouse_genomes_project 7 36543497 36547482 + TEC TEC MGP_LPJ_T0085554.1 MGP_LPJ_G0032731.1 mouse_genomes_project 7 113220091 113221036 - MGP_LPJ_P0085554 protein_coding protein_coding MGP_LPJ_T0085129.1 MGP_LPJ_G0032500.1 mouse_genomes_project 7 106231293 106236706 - MGP_LPJ_P0085129 Tomt protein_coding protein_coding MGP_LPJ_T0085131.1 MGP_LPJ_G0032500.1 mouse_genomes_project 7 106232738 106239280 - MGP_LPJ_P0085131 Tomt protein_coding protein_coding MGP_LPJ_T0081776.1 MGP_LPJ_G0031680.1 mouse_genomes_project 7 17741492 17744083 - MGP_LPJ_P0081776 protein_coding protein_coding MGP_LPJ_T0015638.1 MGP_LPJ_G0013729.1 mouse_genomes_project 7 945171 946045 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102448.1 MGP_LPJ_G0040484.1 mouse_genomes_project 7 108194176 108194461 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0102334.1 MGP_LPJ_G0040371.1 mouse_genomes_project 7 16401961 16410511 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0010960.1 MGP_LPJ_G0009078.1 mouse_genomes_project 7 150648414 150648480 + Gm22064 miRNA miRNA MGP_LPJ_T0102404.1 MGP_LPJ_G0040440.1 mouse_genomes_project 7 49806331 49806950 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002251.1 MGP_LPJ_G0002160.1 mouse_genomes_project 7 45227955 45230711 + TEC TEC MGP_LPJ_T0082471.1 MGP_LPJ_G0031871.1 mouse_genomes_project 7 28170338 28191838 + MGP_LPJ_P0082471 Map4k1 protein_coding protein_coding MGP_LPJ_T0082472.1 MGP_LPJ_G0031871.1 mouse_genomes_project 7 28170440 28191725 + MGP_LPJ_P0082472 Map4k1 protein_coding unknown_likely_coding MGP_LPJ_T0085272.1 MGP_LPJ_G0032576.1 mouse_genomes_project 7 108069384 108191241 + MGP_LPJ_P0085272 protein_coding protein_coding MGP_LPJ_T0085273.1 MGP_LPJ_G0032576.1 mouse_genomes_project 7 108069414 108191232 + MGP_LPJ_P0085273 protein_coding protein_coding MGP_LPJ_T0081630.1 MGP_LPJ_G0031633.1 mouse_genomes_project 7 15760389 15826116 + MGP_LPJ_P0081630 Ceacam5 protein_coding protein_coding MGP_LPJ_T0081914.1 MGP_LPJ_G0031729.1 mouse_genomes_project 7 23037524 23055726 + MGP_LPJ_P0081914 Kcnn4 protein_coding protein_coding MGP_LPJ_T0081915.1 MGP_LPJ_G0031729.1 mouse_genomes_project 7 23037560 23055722 + MGP_LPJ_P0081915 Kcnn4 protein_coding protein_coding MGP_LPJ_T0081916.1 MGP_LPJ_G0031729.1 mouse_genomes_project 7 23037599 23055281 + MGP_LPJ_P0081916 Kcnn4 protein_coding protein_coding MGP_LPJ_T0081917.1 MGP_LPJ_G0031729.1 mouse_genomes_project 7 23050330 23055311 + Kcnn4 protein_coding retained_intron MGP_LPJ_T0081918.1 MGP_LPJ_G0031729.1 mouse_genomes_project 7 23053576 23057271 + Kcnn4 protein_coding retained_intron MGP_LPJ_T0085241.1 MGP_LPJ_G0032547.1 mouse_genomes_project 7 107386101 107387040 - MGP_LPJ_P0085241 Olfr577 protein_coding protein_coding MGP_LPJ_T0008986.1 MGP_LPJ_G0007245.1 mouse_genomes_project 7 102445873 102473293 - Gm44507 lincRNA lincRNA MGP_LPJ_T0082430.1 MGP_LPJ_G0031863.1 mouse_genomes_project 7 27949293 27964410 + MGP_LPJ_P0082430 Rinl protein_coding protein_coding MGP_LPJ_T0015770.1 MGP_LPJ_G0013861.1 mouse_genomes_project 7 63788610 63789069 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008962.1 MGP_LPJ_G0007232.1 mouse_genomes_project 7 83505469 83507350 - 6330403N20Rik lincRNA lincRNA MGP_LPJ_T0102435.1 MGP_LPJ_G0040471.1 mouse_genomes_project 7 90079163 90079858 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0005314.1 MGP_LPJ_G0004507.1 mouse_genomes_project 7 129572262 129587094 - Gm27040 antisense antisense MGP_LPJ_T0008842.1 MGP_LPJ_G0007144.1 mouse_genomes_project 7 33861949 33865629 - Gm12762 lincRNA lincRNA MGP_LPJ_T0002230.1 MGP_LPJ_G0002139.1 mouse_genomes_project 7 34003891 34006529 - TEC TEC MGP_LPJ_T0011708.1 MGP_LPJ_G0009826.1 mouse_genomes_project 7 127976518 127976787 + Gm26414 misc_RNA misc_RNA MGP_LPJ_T0083628.1 MGP_LPJ_G0032145.1 mouse_genomes_project 7 46688812 46705510 - MGP_LPJ_P0083628 Sec1 protein_coding protein_coding MGP_LPJ_T0005323.1 MGP_LPJ_G0004515.1 mouse_genomes_project 7 133864207 133867385 - Gm15533 antisense antisense MGP_LPJ_T0005324.1 MGP_LPJ_G0004515.1 mouse_genomes_project 7 133865072 133867415 - Gm15533 antisense antisense MGP_LPJ_T0102407.1 MGP_LPJ_G0040443.1 mouse_genomes_project 7 50186286 50187070 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0082133.1 MGP_LPJ_G0031781.1 mouse_genomes_project 7 24506581 24541961 - MGP_LPJ_P0082133 Hnrnpul1 protein_coding protein_coding MGP_LPJ_T0082134.1 MGP_LPJ_G0031781.1 mouse_genomes_project 7 24523927 24542027 - MGP_LPJ_P0082134 Hnrnpul1 protein_coding protein_coding MGP_LPJ_T0082135.1 MGP_LPJ_G0031781.1 mouse_genomes_project 7 24526619 24528907 - Hnrnpul1 protein_coding retained_intron MGP_LPJ_T0082136.1 MGP_LPJ_G0031781.1 mouse_genomes_project 7 24529082 24531697 - Hnrnpul1 protein_coding retained_intron MGP_LPJ_T0102414.1 MGP_LPJ_G0040450.1 mouse_genomes_project 7 88542171 88542557 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0015777.1 MGP_LPJ_G0013868.1 mouse_genomes_project 7 68561663 68562409 - processed_pseudogene processed_pseudogene MGP_LPJ_T0085642.1 MGP_LPJ_G0032773.1 mouse_genomes_project 7 115236411 115300574 + MGP_LPJ_P0085642 Swap70 protein_coding protein_coding MGP_LPJ_T0087701.1 MGP_LPJ_G0033214.1 mouse_genomes_project 7 152287728 152296679 + MGP_LPJ_P0087701 Mrgprd protein_coding protein_coding MGP_LPJ_T0085236.1 MGP_LPJ_G0032543.1 mouse_genomes_project 7 107332441 107333398 + MGP_LPJ_P0085236 Olfr572 protein_coding protein_coding MGP_LPJ_T0018341.1 MGP_LPJ_G0015594.1 mouse_genomes_project 7 76765943 76775496 + Gm38143 processed_transcript processed_transcript MGP_LPJ_T0085515.1 MGP_LPJ_G0032699.1 mouse_genomes_project 7 111933608 111937698 - MGP_LPJ_P0085515 Olfr711 protein_coding protein_coding MGP_LPJ_T0098669.1 MGP_LPJ_G0036939.1 mouse_genomes_project 7 121508963 121511020 - Gm44867 sense_intronic sense_intronic MGP_LPJ_T0098670.1 MGP_LPJ_G0036939.1 mouse_genomes_project 7 121508963 121511162 - Gm44867 sense_intronic sense_intronic MGP_LPJ_T0083674.1 MGP_LPJ_G0032156.1 mouse_genomes_project 7 46843016 46853962 - MGP_LPJ_P0083674 protein_coding protein_coding MGP_LPJ_T0082558.1 MGP_LPJ_G0031890.1 mouse_genomes_project 7 29080636 29099558 + MGP_LPJ_P0082558 Zfp790 protein_coding protein_coding MGP_LPJ_T0082559.1 MGP_LPJ_G0031890.1 mouse_genomes_project 7 29080636 29099558 + MGP_LPJ_P0082559 Zfp790 protein_coding protein_coding MGP_LPJ_T0085385.1 MGP_LPJ_G0032657.1 mouse_genomes_project 7 109964233 109965309 + MGP_LPJ_P0085385 Olfr689 protein_coding protein_coding MGP_LPJ_T0085364.1 MGP_LPJ_G0032636.1 mouse_genomes_project 7 109149631 109150600 + MGP_LPJ_P0085364 Olfr659 protein_coding protein_coding MGP_LPJ_T0081141.1 MGP_LPJ_G0031455.1 mouse_genomes_project 7 1551078 1557848 - MGP_LPJ_P0081141 Syt5 protein_coding protein_coding MGP_LPJ_T0081142.1 MGP_LPJ_G0031455.1 mouse_genomes_project 7 1556968 1558822 - MGP_LPJ_P0081142 Syt5 protein_coding protein_coding MGP_LPJ_T0081143.1 MGP_LPJ_G0031455.1 mouse_genomes_project 7 1557573 1558254 - MGP_LPJ_P0081143 Syt5 protein_coding protein_coding MGP_LPJ_T0085549.1 MGP_LPJ_G0032726.1 mouse_genomes_project 7 113016494 113017466 - MGP_LPJ_P0085549 Olfr482 protein_coding protein_coding MGP_LPJ_T0018294.1 MGP_LPJ_G0015581.1 mouse_genomes_project 7 45074781 45093594 + Gm28496 processed_transcript processed_transcript MGP_LPJ_T0018295.1 MGP_LPJ_G0015581.1 mouse_genomes_project 7 45074829 45092762 + Gm28496 processed_transcript processed_transcript MGP_LPJ_T0005206.1 MGP_LPJ_G0004432.1 mouse_genomes_project 7 28798875 28801326 - Gm29326 antisense antisense MGP_LPJ_T0008838.1 MGP_LPJ_G0007140.1 mouse_genomes_project 7 29968157 29970502 + Gm26610 lincRNA lincRNA MGP_LPJ_T0086034.1 MGP_LPJ_G0032861.1 mouse_genomes_project 7 127230418 127264394 + MGP_LPJ_P0086034 Scnn1g protein_coding protein_coding MGP_LPJ_T0015751.1 MGP_LPJ_G0013842.1 mouse_genomes_project 7 45116929 45117878 - processed_pseudogene processed_pseudogene MGP_LPJ_T0086585.1 MGP_LPJ_G0032960.1 mouse_genomes_project 7 133398825 133403271 + MGP_LPJ_P0086585 Tmem265 protein_coding protein_coding MGP_LPJ_T0086586.1 MGP_LPJ_G0032960.1 mouse_genomes_project 7 133399014 133404951 + MGP_LPJ_P0086586 Tmem265 protein_coding protein_coding MGP_LPJ_T0084603.1 MGP_LPJ_G0032360.1 mouse_genomes_project 7 87308761 87325173 + Mesdc2 protein_coding processed_transcript MGP_LPJ_T0084604.1 MGP_LPJ_G0032360.1 mouse_genomes_project 7 87319226 87328752 + MGP_LPJ_P0084604 Mesdc2 protein_coding protein_coding MGP_LPJ_T0084605.1 MGP_LPJ_G0032360.1 mouse_genomes_project 7 87319228 87325000 + MGP_LPJ_P0084605 Mesdc2 protein_coding protein_coding MGP_LPJ_T0084606.1 MGP_LPJ_G0032360.1 mouse_genomes_project 7 87319556 87325313 + MGP_LPJ_P0084606 Mesdc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0002221.1 MGP_LPJ_G0002130.1 mouse_genomes_project 7 1691469 1692764 + TEC TEC MGP_LPJ_T0083275.1 MGP_LPJ_G0032062.1 mouse_genomes_project 7 45074783 45079185 + MGP_LPJ_P0083275 protein_coding protein_coding MGP_LPJ_T0083276.1 MGP_LPJ_G0032062.1 mouse_genomes_project 7 45074809 45079020 + MGP_LPJ_P0083276 protein_coding protein_coding MGP_LPJ_T0083277.1 MGP_LPJ_G0032062.1 mouse_genomes_project 7 45074842 45076808 + protein_coding processed_transcript MGP_LPJ_T0083278.1 MGP_LPJ_G0032062.1 mouse_genomes_project 7 45074842 45079117 + MGP_LPJ_P0083278 protein_coding protein_coding MGP_LPJ_T0083279.1 MGP_LPJ_G0032062.1 mouse_genomes_project 7 45074842 45082543 + MGP_LPJ_P0083279 protein_coding protein_coding MGP_LPJ_T0083280.1 MGP_LPJ_G0032062.1 mouse_genomes_project 7 45074844 45082543 + MGP_LPJ_P0083280 protein_coding protein_coding MGP_LPJ_T0083281.1 MGP_LPJ_G0032062.1 mouse_genomes_project 7 45074852 45076222 + protein_coding processed_transcript MGP_LPJ_T0083282.1 MGP_LPJ_G0032062.1 mouse_genomes_project 7 45074854 45079032 + MGP_LPJ_P0083282 protein_coding protein_coding MGP_LPJ_T0083283.1 MGP_LPJ_G0032062.1 mouse_genomes_project 7 45074855 45078111 + protein_coding processed_transcript MGP_LPJ_T0083284.1 MGP_LPJ_G0032062.1 mouse_genomes_project 7 45074863 45078537 + protein_coding processed_transcript MGP_LPJ_T0083285.1 MGP_LPJ_G0032062.1 mouse_genomes_project 7 45074873 45078584 + protein_coding processed_transcript MGP_LPJ_T0083286.1 MGP_LPJ_G0032062.1 mouse_genomes_project 7 45075286 45078857 + MGP_LPJ_P0083286 protein_coding protein_coding MGP_LPJ_T0083287.1 MGP_LPJ_G0032062.1 mouse_genomes_project 7 45075497 45082543 + MGP_LPJ_P0083287 protein_coding protein_coding MGP_LPJ_T0015690.1 MGP_LPJ_G0013781.1 mouse_genomes_project 7 23579590 23580106 + processed_pseudogene processed_pseudogene MGP_LPJ_T0084328.1 MGP_LPJ_G0032302.1 mouse_genomes_project 7 82959247 82960795 - MGP_LPJ_P0084328 Mesp1 protein_coding protein_coding MGP_LPJ_T0081148.1 MGP_LPJ_G0031457.1 mouse_genomes_project 7 1660966 1663409 - MGP_LPJ_P0081148 Tmem86b protein_coding protein_coding MGP_LPJ_T0081149.1 MGP_LPJ_G0031457.1 mouse_genomes_project 7 1660968 1663114 - MGP_LPJ_P0081149 Tmem86b protein_coding protein_coding MGP_LPJ_T0081150.1 MGP_LPJ_G0031457.1 mouse_genomes_project 7 1661332 1665181 - MGP_LPJ_P0081150 Tmem86b protein_coding protein_coding MGP_LPJ_T0081151.1 MGP_LPJ_G0031457.1 mouse_genomes_project 7 1661530 1663263 - MGP_LPJ_P0081151 Tmem86b protein_coding protein_coding MGP_LPJ_T0086333.1 MGP_LPJ_G0032913.1 mouse_genomes_project 7 132533417 132544371 + MGP_LPJ_P0086333 Gdpd3 protein_coding protein_coding MGP_LPJ_T0086334.1 MGP_LPJ_G0032913.1 mouse_genomes_project 7 132533928 132536838 + Gdpd3 protein_coding retained_intron MGP_LPJ_T0086335.1 MGP_LPJ_G0032913.1 mouse_genomes_project 7 132533930 132537287 + Gdpd3 protein_coding retained_intron MGP_LPJ_T0086336.1 MGP_LPJ_G0032913.1 mouse_genomes_project 7 132535409 132544353 + MGP_LPJ_P0086336 Gdpd3 protein_coding unknown_likely_coding MGP_LPJ_T0086337.1 MGP_LPJ_G0032913.1 mouse_genomes_project 7 132535800 132536661 + Gdpd3 protein_coding retained_intron MGP_LPJ_T0086338.1 MGP_LPJ_G0032913.1 mouse_genomes_project 7 132536775 132539798 + Gdpd3 protein_coding retained_intron MGP_LPJ_T0086339.1 MGP_LPJ_G0032913.1 mouse_genomes_project 7 132537145 132544375 + Gdpd3 protein_coding retained_intron MGP_LPJ_T0080944.1 MGP_LPJ_G0031421.1 mouse_genomes_project 7 186651 201968 + Prkcg protein_coding processed_transcript MGP_LPJ_T0080949.1 MGP_LPJ_G0031421.1 mouse_genomes_project 7 201178 232418 + MGP_LPJ_P0080949 Prkcg protein_coding protein_coding MGP_LPJ_T0080950.1 MGP_LPJ_G0031421.1 mouse_genomes_project 7 201301 231692 + MGP_LPJ_P0080950 Prkcg protein_coding protein_coding MGP_LPJ_T0080951.1 MGP_LPJ_G0031421.1 mouse_genomes_project 7 202972 218358 + MGP_LPJ_P0080951 Prkcg protein_coding nonsense_mediated_decay MGP_LPJ_T0080952.1 MGP_LPJ_G0031421.1 mouse_genomes_project 7 230162 231345 + Prkcg protein_coding retained_intron MGP_LPJ_T0005338.1 MGP_LPJ_G0004527.1 mouse_genomes_project 7 149787205 149807517 - Tspan32os antisense antisense MGP_LPJ_T0005339.1 MGP_LPJ_G0004527.1 mouse_genomes_project 7 149787205 149790277 - Tspan32os antisense antisense MGP_LPJ_T0083653.1 MGP_LPJ_G0032152.1 mouse_genomes_project 7 46741364 46742071 - MGP_LPJ_P0083653 Spaca4 protein_coding protein_coding MGP_LPJ_T0008827.1 MGP_LPJ_G0007131.1 mouse_genomes_project 7 23679237 23683929 + Gm44970 lincRNA lincRNA MGP_LPJ_T0099712.1 MGP_LPJ_G0037975.1 mouse_genomes_project 7 64307084 64307191 - Gm23431 snRNA snRNA MGP_LPJ_T0081339.1 MGP_LPJ_G0031538.1 mouse_genomes_project 7 9326777 9327752 - MGP_LPJ_P0081339 Vmn1r76 protein_coding protein_coding MGP_LPJ_T0015766.1 MGP_LPJ_G0013857.1 mouse_genomes_project 7 58758979 58759399 - processed_pseudogene processed_pseudogene MGP_LPJ_T0084527.1 MGP_LPJ_G0032336.1 mouse_genomes_project 7 84791251 84795261 - MGP_LPJ_P0084527 BC048679 protein_coding protein_coding MGP_LPJ_T0084528.1 MGP_LPJ_G0032336.1 mouse_genomes_project 7 84791251 84795261 - MGP_LPJ_P0084528 BC048679 protein_coding protein_coding MGP_LPJ_T0084622.1 MGP_LPJ_G0032366.1 mouse_genomes_project 7 88295331 88299739 + MGP_LPJ_P0084622 Olfr291 protein_coding protein_coding MGP_LPJ_T0087034.1 MGP_LPJ_G0033048.1 mouse_genomes_project 7 141784514 141787717 + MGP_LPJ_P0087034 protein_coding protein_coding MGP_LPJ_T0102393.1 MGP_LPJ_G0040429.1 mouse_genomes_project 7 48882091 49406195 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0100944.1 MGP_LPJ_G0039207.1 mouse_genomes_project 7 13858538 13858647 - Snord23 snoRNA snoRNA MGP_LPJ_T0081974.1 MGP_LPJ_G0031747.1 mouse_genomes_project 7 23583254 23589871 - MGP_LPJ_P0081974 Lypd4 protein_coding protein_coding MGP_LPJ_T0081975.1 MGP_LPJ_G0031747.1 mouse_genomes_project 7 23583959 23589662 - MGP_LPJ_P0081975 Lypd4 protein_coding protein_coding MGP_LPJ_T0085281.1 MGP_LPJ_G0032584.1 mouse_genomes_project 7 108218959 108219910 + MGP_LPJ_P0085281 protein_coding protein_coding MGP_LPJ_T0084009.1 MGP_LPJ_G0032244.1 mouse_genomes_project 7 66776465 66783422 + Mcee protein_coding processed_transcript MGP_LPJ_T0084010.1 MGP_LPJ_G0032244.1 mouse_genomes_project 7 66776503 66797416 + MGP_LPJ_P0084010 Mcee protein_coding protein_coding MGP_LPJ_T0084011.1 MGP_LPJ_G0032244.1 mouse_genomes_project 7 66776598 66797412 + MGP_LPJ_P0084011 Mcee protein_coding protein_coding MGP_LPJ_T0084012.1 MGP_LPJ_G0032244.1 mouse_genomes_project 7 66776633 66797412 + MGP_LPJ_P0084012 Mcee protein_coding protein_coding MGP_LPJ_T0008927.1 MGP_LPJ_G0007209.1 mouse_genomes_project 7 75950105 75950485 - Gm28746 lincRNA lincRNA MGP_LPJ_T0084534.1 MGP_LPJ_G0032340.1 mouse_genomes_project 7 85073020 85078788 + MGP_LPJ_P0084534 protein_coding protein_coding MGP_LPJ_T0084535.1 MGP_LPJ_G0032340.1 mouse_genomes_project 7 85073145 85077758 + MGP_LPJ_P0084535 protein_coding protein_coding MGP_LPJ_T0084536.1 MGP_LPJ_G0032340.1 mouse_genomes_project 7 85073378 85078806 + MGP_LPJ_P0084536 protein_coding protein_coding MGP_LPJ_T0015788.1 MGP_LPJ_G0013879.1 mouse_genomes_project 7 77733867 77733997 - processed_pseudogene processed_pseudogene MGP_LPJ_T0085353.1 MGP_LPJ_G0032628.1 mouse_genomes_project 7 108945642 108979663 - MGP_LPJ_P0085353 Trim30d protein_coding protein_coding MGP_LPJ_T0085354.1 MGP_LPJ_G0032628.1 mouse_genomes_project 7 108947474 108979640 - MGP_LPJ_P0085354 Trim30d protein_coding protein_coding MGP_LPJ_T0085355.1 MGP_LPJ_G0032628.1 mouse_genomes_project 7 108947853 108960009 - MGP_LPJ_P0085355 Trim30d protein_coding protein_coding MGP_LPJ_T0087281.1 MGP_LPJ_G0033132.1 mouse_genomes_project 7 147882523 147886561 - MGP_LPJ_P0087281 Lmntd2 protein_coding protein_coding MGP_LPJ_T0087282.1 MGP_LPJ_G0033132.1 mouse_genomes_project 7 147882523 147886563 - MGP_LPJ_P0087282 Lmntd2 protein_coding protein_coding MGP_LPJ_T0082173.1 MGP_LPJ_G0031793.1 mouse_genomes_project 7 25608498 25623938 + MGP_LPJ_P0082173 Cyp2b19 protein_coding protein_coding MGP_LPJ_T0082174.1 MGP_LPJ_G0031793.1 mouse_genomes_project 7 25608519 25616952 + Cyp2b19 protein_coding retained_intron MGP_LPJ_T0082175.1 MGP_LPJ_G0031793.1 mouse_genomes_project 7 25617858 25622699 + Cyp2b19 protein_coding retained_intron MGP_LPJ_T0083447.1 MGP_LPJ_G0032090.1 mouse_genomes_project 7 45753545 45760283 - MGP_LPJ_P0083447 Ptov1 protein_coding protein_coding MGP_LPJ_T0010900.1 MGP_LPJ_G0009018.1 mouse_genomes_project 7 63929665 63929734 - Mir344d-1 miRNA miRNA MGP_LPJ_T0087499.1 MGP_LPJ_G0033174.1 mouse_genomes_project 7 149228232 149262290 + MGP_LPJ_P0087499 Lsp1 protein_coding protein_coding MGP_LPJ_T0087500.1 MGP_LPJ_G0033174.1 mouse_genomes_project 7 149228269 149262290 + MGP_LPJ_P0087500 Lsp1 protein_coding protein_coding MGP_LPJ_T0087501.1 MGP_LPJ_G0033174.1 mouse_genomes_project 7 149228287 149262026 + MGP_LPJ_P0087501 Lsp1 protein_coding protein_coding MGP_LPJ_T0087502.1 MGP_LPJ_G0033174.1 mouse_genomes_project 7 149239266 149262022 + MGP_LPJ_P0087502 Lsp1 protein_coding protein_coding MGP_LPJ_T0087503.1 MGP_LPJ_G0033174.1 mouse_genomes_project 7 149239295 149255794 + Lsp1 protein_coding retained_intron MGP_LPJ_T0087504.1 MGP_LPJ_G0033174.1 mouse_genomes_project 7 149239574 149262023 + MGP_LPJ_P0087504 Lsp1 protein_coding protein_coding MGP_LPJ_T0087505.1 MGP_LPJ_G0033174.1 mouse_genomes_project 7 149242417 149253927 + Lsp1 protein_coding processed_transcript MGP_LPJ_T0087506.1 MGP_LPJ_G0033174.1 mouse_genomes_project 7 149244436 149262290 + Lsp1 protein_coding processed_transcript MGP_LPJ_T0087507.1 MGP_LPJ_G0033174.1 mouse_genomes_project 7 149250681 149257406 + Lsp1 protein_coding processed_transcript MGP_LPJ_T0087508.1 MGP_LPJ_G0033174.1 mouse_genomes_project 7 149250826 149253903 + Lsp1 protein_coding processed_transcript MGP_LPJ_T0087509.1 MGP_LPJ_G0033174.1 mouse_genomes_project 7 149256439 149257845 + Lsp1 protein_coding retained_intron MGP_LPJ_T0087510.1 MGP_LPJ_G0033174.1 mouse_genomes_project 7 149257235 149261940 + Lsp1 protein_coding retained_intron MGP_LPJ_T0085170.1 MGP_LPJ_G0032509.1 mouse_genomes_project 7 106440211 106447514 - MGP_LPJ_P0085170 Art5 protein_coding protein_coding MGP_LPJ_T0085171.1 MGP_LPJ_G0032509.1 mouse_genomes_project 7 106440212 106443562 - MGP_LPJ_P0085171 Art5 protein_coding protein_coding MGP_LPJ_T0085172.1 MGP_LPJ_G0032509.1 mouse_genomes_project 7 106440446 106443272 - MGP_LPJ_P0085172 Art5 protein_coding protein_coding MGP_LPJ_T0085173.1 MGP_LPJ_G0032509.1 mouse_genomes_project 7 106440446 106442826 - MGP_LPJ_P0085173 Art5 protein_coding protein_coding MGP_LPJ_T0009066.1 MGP_LPJ_G0007296.1 mouse_genomes_project 7 140751655 140830312 - Gm4593 lincRNA lincRNA MGP_LPJ_T0009067.1 MGP_LPJ_G0007296.1 mouse_genomes_project 7 140829518 140832494 - Gm4593 lincRNA lincRNA MGP_LPJ_T0087154.1 MGP_LPJ_G0033081.1 mouse_genomes_project 7 146754400 146763324 + MGP_LPJ_P0087154 protein_coding protein_coding MGP_LPJ_T0087155.1 MGP_LPJ_G0033081.1 mouse_genomes_project 7 146755166 146763143 + MGP_LPJ_P0087155 protein_coding unknown_likely_coding MGP_LPJ_T0087174.1 MGP_LPJ_G0033092.1 mouse_genomes_project 7 147015395 147016475 - MGP_LPJ_P0087174 Olfr530 protein_coding protein_coding MGP_LPJ_T0005660.1 MGP_LPJ_G0004766.1 mouse_genomes_project 7 82399273 82400397 - Gm44558 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_LPJ_T0005661.1 MGP_LPJ_G0004766.1 mouse_genomes_project 7 82399277 82400621 - Gm44558 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_LPJ_T0081274.1 MGP_LPJ_G0031501.1 mouse_genomes_project 7 3394198 3413223 + MGP_LPJ_P0081274 Zscan5b protein_coding protein_coding MGP_LPJ_T0081275.1 MGP_LPJ_G0031501.1 mouse_genomes_project 7 3394215 3403918 + MGP_LPJ_P0081275 Zscan5b protein_coding protein_coding MGP_LPJ_T0081276.1 MGP_LPJ_G0031501.1 mouse_genomes_project 7 3402692 3412989 + MGP_LPJ_P0081276 Zscan5b protein_coding protein_coding MGP_LPJ_T0084996.1 MGP_LPJ_G0032480.1 mouse_genomes_project 7 104772882 104775969 + MGP_LPJ_P0084996 Coa4 protein_coding protein_coding MGP_LPJ_T0084997.1 MGP_LPJ_G0032480.1 mouse_genomes_project 7 104773014 104775053 + MGP_LPJ_P0084997 Coa4 protein_coding protein_coding MGP_LPJ_T0085239.1 MGP_LPJ_G0032546.1 mouse_genomes_project 7 107377663 107378602 + MGP_LPJ_P0085239 Olfr576 protein_coding protein_coding MGP_LPJ_T0085240.1 MGP_LPJ_G0032546.1 mouse_genomes_project 7 107377663 107388210 + MGP_LPJ_P0085240 Olfr576 protein_coding protein_coding MGP_LPJ_T0085485.1 MGP_LPJ_G0032678.1 mouse_genomes_project 7 110428327 110462693 - MGP_LPJ_P0085485 Dchs1 protein_coding protein_coding MGP_LPJ_T0085486.1 MGP_LPJ_G0032678.1 mouse_genomes_project 7 110428328 110462797 - MGP_LPJ_P0085486 Dchs1 protein_coding protein_coding MGP_LPJ_T0085487.1 MGP_LPJ_G0032678.1 mouse_genomes_project 7 110432314 110433228 - Dchs1 protein_coding retained_intron MGP_LPJ_T0085488.1 MGP_LPJ_G0032678.1 mouse_genomes_project 7 110438801 110462695 - MGP_LPJ_P0085488 Dchs1 protein_coding protein_coding MGP_LPJ_T0010961.1 MGP_LPJ_G0009079.1 mouse_genomes_project 7 150813075 150813169 + Mir6404 miRNA miRNA MGP_LPJ_T0087200.1 MGP_LPJ_G0033111.1 mouse_genomes_project 7 147488931 147491924 - MGP_LPJ_P0087200 Bet1l protein_coding protein_coding MGP_LPJ_T0085359.1 MGP_LPJ_G0032631.1 mouse_genomes_project 7 109034707 109035753 + MGP_LPJ_P0085359 Olfr653 protein_coding protein_coding MGP_LPJ_T0086960.1 MGP_LPJ_G0033034.1 mouse_genomes_project 7 139160837 139215343 + MGP_LPJ_P0086960 Zranb1 protein_coding protein_coding MGP_LPJ_T0086961.1 MGP_LPJ_G0033034.1 mouse_genomes_project 7 139212250 139214158 + Zranb1 protein_coding retained_intron MGP_LPJ_T0083336.1 MGP_LPJ_G0032071.1 mouse_genomes_project 7 45346273 45352866 - MGP_LPJ_P0083336 Emc10 protein_coding protein_coding MGP_LPJ_T0083337.1 MGP_LPJ_G0032071.1 mouse_genomes_project 7 45346447 45352743 - MGP_LPJ_P0083337 Emc10 protein_coding protein_coding MGP_LPJ_T0083338.1 MGP_LPJ_G0032071.1 mouse_genomes_project 7 45347221 45348355 - Emc10 protein_coding retained_intron MGP_LPJ_T0083339.1 MGP_LPJ_G0032071.1 mouse_genomes_project 7 45348071 45352800 - Emc10 protein_coding retained_intron MGP_LPJ_T0083340.1 MGP_LPJ_G0032071.1 mouse_genomes_project 7 45348339 45352765 - MGP_LPJ_P0083340 Emc10 protein_coding protein_coding MGP_LPJ_T0083341.1 MGP_LPJ_G0032071.1 mouse_genomes_project 7 45350610 45352734 - Emc10 protein_coding retained_intron MGP_LPJ_T0086030.1 MGP_LPJ_G0032859.1 mouse_genomes_project 7 126881177 126887386 + MGP_LPJ_P0086030 Hs3st2 protein_coding protein_coding MGP_LPJ_T0086031.1 MGP_LPJ_G0032859.1 mouse_genomes_project 7 126881608 126988176 + MGP_LPJ_P0086031 Hs3st2 protein_coding protein_coding MGP_LPJ_T0081759.1 MGP_LPJ_G0031677.1 mouse_genomes_project 7 17705124 17718690 + MGP_LPJ_P0081759 Ercc2 protein_coding protein_coding MGP_LPJ_T0081760.1 MGP_LPJ_G0031677.1 mouse_genomes_project 7 17705132 17708823 + Ercc2 protein_coding processed_transcript MGP_LPJ_T0081761.1 MGP_LPJ_G0031677.1 mouse_genomes_project 7 17705145 17718688 + MGP_LPJ_P0081761 Ercc2 protein_coding protein_coding MGP_LPJ_T0081762.1 MGP_LPJ_G0031677.1 mouse_genomes_project 7 17705154 17718690 + MGP_LPJ_P0081762 Ercc2 protein_coding protein_coding MGP_LPJ_T0081763.1 MGP_LPJ_G0031677.1 mouse_genomes_project 7 17705321 17709028 + Ercc2 protein_coding processed_transcript MGP_LPJ_T0081764.1 MGP_LPJ_G0031677.1 mouse_genomes_project 7 17705382 17717457 + MGP_LPJ_P0081764 Ercc2 protein_coding protein_coding MGP_LPJ_T0081765.1 MGP_LPJ_G0031677.1 mouse_genomes_project 7 17711242 17716676 + Ercc2 protein_coding processed_transcript MGP_LPJ_T0081766.1 MGP_LPJ_G0031677.1 mouse_genomes_project 7 17713427 17714913 + Ercc2 protein_coding retained_intron MGP_LPJ_T0081767.1 MGP_LPJ_G0031677.1 mouse_genomes_project 7 17716452 17717782 + Ercc2 protein_coding retained_intron MGP_LPJ_T0081768.1 MGP_LPJ_G0031677.1 mouse_genomes_project 7 17716656 17717061 + Ercc2 protein_coding retained_intron MGP_LPJ_T0002260.1 MGP_LPJ_G0002169.1 mouse_genomes_project 7 57797861 57799600 - TEC TEC MGP_LPJ_T0008948.1 MGP_LPJ_G0007225.1 mouse_genomes_project 7 81925760 81926037 + 1700011D18Rik lincRNA lincRNA MGP_LPJ_T0002285.1 MGP_LPJ_G0002193.1 mouse_genomes_project 7 78394450 78395846 + TEC TEC MGP_LPJ_T0081638.1 MGP_LPJ_G0031638.1 mouse_genomes_project 7 16257554 16262945 + MGP_LPJ_P0081638 Igfl3 protein_coding protein_coding MGP_LPJ_T0086710.1 MGP_LPJ_G0032984.1 mouse_genomes_project 7 133824184 133842754 + MGP_LPJ_P0086710 Fus protein_coding protein_coding MGP_LPJ_T0086711.1 MGP_LPJ_G0032984.1 mouse_genomes_project 7 133824217 133838155 + MGP_LPJ_P0086711 Fus protein_coding protein_coding MGP_LPJ_T0086712.1 MGP_LPJ_G0032984.1 mouse_genomes_project 7 133824218 133830454 + Fus protein_coding retained_intron MGP_LPJ_T0086713.1 MGP_LPJ_G0032984.1 mouse_genomes_project 7 133824218 133828351 + Fus protein_coding processed_transcript MGP_LPJ_T0086714.1 MGP_LPJ_G0032984.1 mouse_genomes_project 7 133824218 133838152 + Fus protein_coding retained_intron MGP_LPJ_T0086715.1 MGP_LPJ_G0032984.1 mouse_genomes_project 7 133824235 133838155 + MGP_LPJ_P0086715 Fus protein_coding protein_coding MGP_LPJ_T0086716.1 MGP_LPJ_G0032984.1 mouse_genomes_project 7 133828032 133830454 + Fus protein_coding retained_intron MGP_LPJ_T0086717.1 MGP_LPJ_G0032984.1 mouse_genomes_project 7 133828032 133833399 + Fus protein_coding processed_transcript MGP_LPJ_T0086718.1 MGP_LPJ_G0032984.1 mouse_genomes_project 7 133830278 133834354 + Fus protein_coding retained_intron MGP_LPJ_T0086719.1 MGP_LPJ_G0032984.1 mouse_genomes_project 7 133831108 133832962 + Fus protein_coding retained_intron MGP_LPJ_T0086720.1 MGP_LPJ_G0032984.1 mouse_genomes_project 7 133831816 133836356 + Fus protein_coding retained_intron MGP_LPJ_T0086721.1 MGP_LPJ_G0032984.1 mouse_genomes_project 7 133833441 133837567 + MGP_LPJ_P0086721 Fus protein_coding protein_coding MGP_LPJ_T0086722.1 MGP_LPJ_G0032984.1 mouse_genomes_project 7 133834258 133836306 + Fus protein_coding retained_intron MGP_LPJ_T0086723.1 MGP_LPJ_G0032984.1 mouse_genomes_project 7 133836303 133838130 + MGP_LPJ_P0086723 Fus protein_coding protein_coding MGP_LPJ_T0086724.1 MGP_LPJ_G0032984.1 mouse_genomes_project 7 133836335 133837947 + Fus protein_coding retained_intron MGP_LPJ_T0086725.1 MGP_LPJ_G0032984.1 mouse_genomes_project 7 133840137 133842754 + MGP_LPJ_P0086725 Fus protein_coding protein_coding MGP_LPJ_T0005212.1 MGP_LPJ_G0004437.1 mouse_genomes_project 7 30060978 30077181 + Gm26935 antisense antisense MGP_LPJ_T0086227.1 MGP_LPJ_G0032896.1 mouse_genomes_project 7 132168029 132186019 + Rabep2 protein_coding retained_intron MGP_LPJ_T0086228.1 MGP_LPJ_G0032896.1 mouse_genomes_project 7 132168369 132176413 + Rabep2 protein_coding retained_intron MGP_LPJ_T0086229.1 MGP_LPJ_G0032896.1 mouse_genomes_project 7 132168402 132186027 + MGP_LPJ_P0086229 Rabep2 protein_coding protein_coding MGP_LPJ_T0086230.1 MGP_LPJ_G0032896.1 mouse_genomes_project 7 132168652 132178692 + MGP_LPJ_P0086230 Rabep2 protein_coding nonsense_mediated_decay MGP_LPJ_T0086231.1 MGP_LPJ_G0032896.1 mouse_genomes_project 7 132168698 132178683 + MGP_LPJ_P0086231 Rabep2 protein_coding nonsense_mediated_decay MGP_LPJ_T0086232.1 MGP_LPJ_G0032896.1 mouse_genomes_project 7 132178451 132179015 + Rabep2 protein_coding retained_intron MGP_LPJ_T0086233.1 MGP_LPJ_G0032896.1 mouse_genomes_project 7 132180568 132184802 + Rabep2 protein_coding retained_intron MGP_LPJ_T0086234.1 MGP_LPJ_G0032896.1 mouse_genomes_project 7 132184917 132189363 + Rabep2 protein_coding retained_intron MGP_LPJ_T0102452.1 MGP_LPJ_G0040488.1 mouse_genomes_project 7 108533020 108533926 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0018282.1 MGP_LPJ_G0015573.1 mouse_genomes_project 7 26217716 26229096 + Gm44641 processed_transcript processed_transcript MGP_LPJ_T0082274.1 MGP_LPJ_G0031819.1 mouse_genomes_project 7 26525385 26547180 - MGP_LPJ_P0082274 Pld3 protein_coding protein_coding MGP_LPJ_T0082275.1 MGP_LPJ_G0031819.1 mouse_genomes_project 7 26525385 26547174 - MGP_LPJ_P0082275 Pld3 protein_coding protein_coding MGP_LPJ_T0082276.1 MGP_LPJ_G0031819.1 mouse_genomes_project 7 26525580 26526132 - Pld3 protein_coding retained_intron MGP_LPJ_T0082277.1 MGP_LPJ_G0031819.1 mouse_genomes_project 7 26526810 26531271 - Pld3 protein_coding retained_intron MGP_LPJ_T0082278.1 MGP_LPJ_G0031819.1 mouse_genomes_project 7 26532981 26546978 - MGP_LPJ_P0082278 Pld3 protein_coding nonsense_mediated_decay MGP_LPJ_T0082279.1 MGP_LPJ_G0031819.1 mouse_genomes_project 7 26534547 26547146 - MGP_LPJ_P0082279 Pld3 protein_coding protein_coding MGP_LPJ_T0082280.1 MGP_LPJ_G0031819.1 mouse_genomes_project 7 26535082 26536171 - MGP_LPJ_P0082280 Pld3 protein_coding protein_coding MGP_LPJ_T0082281.1 MGP_LPJ_G0031819.1 mouse_genomes_project 7 26536241 26547113 - Pld3 protein_coding processed_transcript MGP_LPJ_T0086364.1 MGP_LPJ_G0032917.1 mouse_genomes_project 7 132563959 132567980 - MGP_LPJ_P0086364 Aldoa protein_coding protein_coding MGP_LPJ_T0086365.1 MGP_LPJ_G0032917.1 mouse_genomes_project 7 132563960 132569159 - MGP_LPJ_P0086365 Aldoa protein_coding protein_coding MGP_LPJ_T0086366.1 MGP_LPJ_G0032917.1 mouse_genomes_project 7 132563961 132567867 - MGP_LPJ_P0086366 Aldoa protein_coding protein_coding MGP_LPJ_T0086367.1 MGP_LPJ_G0032917.1 mouse_genomes_project 7 132564637 132567008 - Aldoa protein_coding processed_transcript MGP_LPJ_T0086368.1 MGP_LPJ_G0032917.1 mouse_genomes_project 7 132564674 132567033 - Aldoa protein_coding retained_intron MGP_LPJ_T0086369.1 MGP_LPJ_G0032917.1 mouse_genomes_project 7 132564674 132566477 - Aldoa protein_coding retained_intron MGP_LPJ_T0086370.1 MGP_LPJ_G0032917.1 mouse_genomes_project 7 132564764 132568758 - MGP_LPJ_P0086370 Aldoa protein_coding protein_coding MGP_LPJ_T0086371.1 MGP_LPJ_G0032917.1 mouse_genomes_project 7 132564996 132567719 - MGP_LPJ_P0086371 Aldoa protein_coding protein_coding MGP_LPJ_T0086372.1 MGP_LPJ_G0032917.1 mouse_genomes_project 7 132565207 132567896 - Aldoa protein_coding retained_intron MGP_LPJ_T0086373.1 MGP_LPJ_G0032917.1 mouse_genomes_project 7 132565393 132567835 - MGP_LPJ_P0086373 Aldoa protein_coding protein_coding MGP_LPJ_T0086374.1 MGP_LPJ_G0032917.1 mouse_genomes_project 7 132565443 132568748 - MGP_LPJ_P0086374 Aldoa protein_coding protein_coding MGP_LPJ_T0086375.1 MGP_LPJ_G0032917.1 mouse_genomes_project 7 132565565 132569463 - MGP_LPJ_P0086375 Aldoa protein_coding protein_coding MGP_LPJ_T0010922.1 MGP_LPJ_G0009040.1 mouse_genomes_project 7 81059385 81059479 - Gm44358 miRNA miRNA MGP_LPJ_T0084251.1 MGP_LPJ_G0032289.1 mouse_genomes_project 7 82158758 82221592 + MGP_LPJ_P0084251 Acan protein_coding protein_coding MGP_LPJ_T0084252.1 MGP_LPJ_G0032289.1 mouse_genomes_project 7 82206246 82221120 + MGP_LPJ_P0084252 Acan protein_coding protein_coding MGP_LPJ_T0083479.1 MGP_LPJ_G0032110.1 mouse_genomes_project 7 46058626 46073269 - Aldh16a1 protein_coding retained_intron MGP_LPJ_T0083480.1 MGP_LPJ_G0032110.1 mouse_genomes_project 7 46058847 46073316 - MGP_LPJ_P0083480 Aldh16a1 protein_coding protein_coding MGP_LPJ_T0083481.1 MGP_LPJ_G0032110.1 mouse_genomes_project 7 46059777 46062632 - MGP_LPJ_P0083481 Aldh16a1 protein_coding protein_coding MGP_LPJ_T0083482.1 MGP_LPJ_G0032110.1 mouse_genomes_project 7 46060387 46073327 - MGP_LPJ_P0083482 Aldh16a1 protein_coding protein_coding MGP_LPJ_T0083483.1 MGP_LPJ_G0032110.1 mouse_genomes_project 7 46060721 46062666 - Aldh16a1 protein_coding processed_transcript MGP_LPJ_T0083484.1 MGP_LPJ_G0032110.1 mouse_genomes_project 7 46062994 46063977 - Aldh16a1 protein_coding retained_intron MGP_LPJ_T0083485.1 MGP_LPJ_G0032110.1 mouse_genomes_project 7 46065340 46073233 - Aldh16a1 protein_coding processed_transcript MGP_LPJ_T0083486.1 MGP_LPJ_G0032110.1 mouse_genomes_project 7 46065401 46073190 - Aldh16a1 protein_coding processed_transcript MGP_LPJ_T0083487.1 MGP_LPJ_G0032110.1 mouse_genomes_project 7 46065480 46065793 - Aldh16a1 protein_coding processed_transcript MGP_LPJ_T0083488.1 MGP_LPJ_G0032110.1 mouse_genomes_project 7 46065825 46067122 - Aldh16a1 protein_coding retained_intron MGP_LPJ_T0015885.1 MGP_LPJ_G0013976.1 mouse_genomes_project 7 145463670 145464597 + processed_pseudogene processed_pseudogene MGP_LPJ_T0084482.1 MGP_LPJ_G0032327.1 mouse_genomes_project 7 84152880 84155023 - Nmb protein_coding retained_intron MGP_LPJ_T0084483.1 MGP_LPJ_G0032327.1 mouse_genomes_project 7 84152881 84155706 - MGP_LPJ_P0084483 Nmb protein_coding protein_coding MGP_LPJ_T0084484.1 MGP_LPJ_G0032327.1 mouse_genomes_project 7 84152887 84155004 - Nmb protein_coding retained_intron MGP_LPJ_T0084485.1 MGP_LPJ_G0032327.1 mouse_genomes_project 7 84152887 84155690 - MGP_LPJ_P0084485 Nmb protein_coding protein_coding MGP_LPJ_T0083226.1 MGP_LPJ_G0032035.1 mouse_genomes_project 7 44337313 44352824 + MGP_LPJ_P0083226 Zfp719 protein_coding protein_coding MGP_LPJ_T0083227.1 MGP_LPJ_G0032035.1 mouse_genomes_project 7 44337322 44349165 + MGP_LPJ_P0083227 Zfp719 protein_coding protein_coding MGP_LPJ_T0083228.1 MGP_LPJ_G0032035.1 mouse_genomes_project 7 44337342 44343293 + Zfp719 protein_coding retained_intron MGP_LPJ_T0083035.1 MGP_LPJ_G0031989.1 mouse_genomes_project 7 35116415 35160917 + MGP_LPJ_P0083035 Cep89 protein_coding nonsense_mediated_decay MGP_LPJ_T0083036.1 MGP_LPJ_G0031989.1 mouse_genomes_project 7 35116435 35160919 + MGP_LPJ_P0083036 Cep89 protein_coding protein_coding MGP_LPJ_T0083037.1 MGP_LPJ_G0031989.1 mouse_genomes_project 7 35116487 35131910 + Cep89 protein_coding retained_intron MGP_LPJ_T0083038.1 MGP_LPJ_G0031989.1 mouse_genomes_project 7 35116496 35130564 + Cep89 protein_coding processed_transcript MGP_LPJ_T0083039.1 MGP_LPJ_G0031989.1 mouse_genomes_project 7 35116510 35130547 + MGP_LPJ_P0083039 Cep89 protein_coding nonsense_mediated_decay MGP_LPJ_T0083040.1 MGP_LPJ_G0031989.1 mouse_genomes_project 7 35116548 35160798 + MGP_LPJ_P0083040 Cep89 protein_coding unknown_likely_coding MGP_LPJ_T0083041.1 MGP_LPJ_G0031989.1 mouse_genomes_project 7 35137417 35139346 + Cep89 protein_coding processed_transcript MGP_LPJ_T0083042.1 MGP_LPJ_G0031989.1 mouse_genomes_project 7 35137510 35142282 + Cep89 protein_coding retained_intron MGP_LPJ_T0083043.1 MGP_LPJ_G0031989.1 mouse_genomes_project 7 35138879 35150751 + MGP_LPJ_P0083043 Cep89 protein_coding nonsense_mediated_decay MGP_LPJ_T0083044.1 MGP_LPJ_G0031989.1 mouse_genomes_project 7 35139366 35150252 + Cep89 protein_coding processed_transcript MGP_LPJ_T0083045.1 MGP_LPJ_G0031989.1 mouse_genomes_project 7 35149751 35155160 + Cep89 protein_coding retained_intron MGP_LPJ_T0083046.1 MGP_LPJ_G0031989.1 mouse_genomes_project 7 35150858 35160911 + MGP_LPJ_P0083046 Cep89 protein_coding protein_coding MGP_LPJ_T0083365.1 MGP_LPJ_G0032076.1 mouse_genomes_project 7 45410563 45414634 - MGP_LPJ_P0083365 Nr1h2 protein_coding protein_coding MGP_LPJ_T0083366.1 MGP_LPJ_G0032076.1 mouse_genomes_project 7 45410563 45414897 - MGP_LPJ_P0083366 Nr1h2 protein_coding protein_coding MGP_LPJ_T0083367.1 MGP_LPJ_G0032076.1 mouse_genomes_project 7 45410564 45414896 - MGP_LPJ_P0083367 Nr1h2 protein_coding protein_coding MGP_LPJ_T0083368.1 MGP_LPJ_G0032076.1 mouse_genomes_project 7 45410582 45414871 - MGP_LPJ_P0083368 Nr1h2 protein_coding protein_coding MGP_LPJ_T0083369.1 MGP_LPJ_G0032076.1 mouse_genomes_project 7 45410599 45414871 - MGP_LPJ_P0083369 Nr1h2 protein_coding protein_coding MGP_LPJ_T0083370.1 MGP_LPJ_G0032076.1 mouse_genomes_project 7 45411249 45414859 - Nr1h2 protein_coding retained_intron MGP_LPJ_T0083371.1 MGP_LPJ_G0032076.1 mouse_genomes_project 7 45411321 45412571 - Nr1h2 protein_coding retained_intron MGP_LPJ_T0083372.1 MGP_LPJ_G0032076.1 mouse_genomes_project 7 45412004 45414899 - Nr1h2 protein_coding retained_intron MGP_LPJ_T0083373.1 MGP_LPJ_G0032076.1 mouse_genomes_project 7 45412087 45412819 - Nr1h2 protein_coding retained_intron MGP_LPJ_T0083374.1 MGP_LPJ_G0032076.1 mouse_genomes_project 7 45413156 45413535 - Nr1h2 protein_coding retained_intron MGP_LPJ_T0083375.1 MGP_LPJ_G0032076.1 mouse_genomes_project 7 45413441 45414871 - Nr1h2 protein_coding retained_intron MGP_LPJ_T0083376.1 MGP_LPJ_G0032076.1 mouse_genomes_project 7 45413540 45414160 - Nr1h2 protein_coding retained_intron MGP_LPJ_T0083377.1 MGP_LPJ_G0032076.1 mouse_genomes_project 7 45413581 45414847 - Nr1h2 protein_coding retained_intron MGP_LPJ_T0083450.1 MGP_LPJ_G0032093.1 mouse_genomes_project 7 45793474 45823471 - MGP_LPJ_P0083450 Ap2a1 protein_coding protein_coding MGP_LPJ_T0083451.1 MGP_LPJ_G0032093.1 mouse_genomes_project 7 45793474 45823471 - MGP_LPJ_P0083451 Ap2a1 protein_coding protein_coding MGP_LPJ_T0083452.1 MGP_LPJ_G0032093.1 mouse_genomes_project 7 45793474 45823471 - MGP_LPJ_P0083452 Ap2a1 protein_coding protein_coding MGP_LPJ_T0083453.1 MGP_LPJ_G0032093.1 mouse_genomes_project 7 45793474 45823471 - MGP_LPJ_P0083453 Ap2a1 protein_coding protein_coding MGP_LPJ_T0081706.1 MGP_LPJ_G0031661.1 mouse_genomes_project 7 17390844 17396310 + MGP_LPJ_P0081706 Six5 protein_coding protein_coding MGP_LPJ_T0008834.1 MGP_LPJ_G0007136.1 mouse_genomes_project 7 24655548 24668352 + Gm30146 lincRNA lincRNA MGP_LPJ_T0102353.1 MGP_LPJ_G0040389.1 mouse_genomes_project 7 33392383 33393221 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0102312.1 MGP_LPJ_G0040349.1 mouse_genomes_project 7 9838722 9839121 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002228.1 MGP_LPJ_G0002137.1 mouse_genomes_project 7 30618931 30619689 + TEC TEC MGP_LPJ_T0005254.1 MGP_LPJ_G0004467.1 mouse_genomes_project 7 77238221 77258983 + Gm7580 antisense antisense MGP_LPJ_T0015809.1 MGP_LPJ_G0013900.1 mouse_genomes_project 7 93763552 93764052 - processed_pseudogene processed_pseudogene MGP_LPJ_T0082014.1 MGP_LPJ_G0031754.1 mouse_genomes_project 7 23707354 23736862 - MGP_LPJ_P0082014 Atp1a3 protein_coding protein_coding MGP_LPJ_T0082015.1 MGP_LPJ_G0031754.1 mouse_genomes_project 7 23707354 23736925 - MGP_LPJ_P0082015 Atp1a3 protein_coding protein_coding MGP_LPJ_T0082016.1 MGP_LPJ_G0031754.1 mouse_genomes_project 7 23707357 23736910 - MGP_LPJ_P0082016 Atp1a3 protein_coding protein_coding MGP_LPJ_T0082017.1 MGP_LPJ_G0031754.1 mouse_genomes_project 7 23721091 23736874 - Atp1a3 protein_coding retained_intron MGP_LPJ_T0082018.1 MGP_LPJ_G0031754.1 mouse_genomes_project 7 23731544 23736924 - Atp1a3 protein_coding retained_intron MGP_LPJ_T0087440.1 MGP_LPJ_G0033157.1 mouse_genomes_project 7 148460659 148493826 + MGP_LPJ_P0087440 Muc5ac protein_coding protein_coding MGP_LPJ_T0087441.1 MGP_LPJ_G0033157.1 mouse_genomes_project 7 148460659 148493612 + MGP_LPJ_P0087441 Muc5ac protein_coding protein_coding MGP_LPJ_T0087442.1 MGP_LPJ_G0033157.1 mouse_genomes_project 7 148460715 148493922 + MGP_LPJ_P0087442 Muc5ac protein_coding protein_coding MGP_LPJ_T0081906.1 MGP_LPJ_G0031726.1 mouse_genomes_project 7 22962003 22978972 - MGP_LPJ_P0081906 Zfp94 protein_coding protein_coding MGP_LPJ_T0081907.1 MGP_LPJ_G0031726.1 mouse_genomes_project 7 22962096 22979033 - MGP_LPJ_P0081907 Zfp94 protein_coding protein_coding MGP_LPJ_T0081908.1 MGP_LPJ_G0031726.1 mouse_genomes_project 7 22963926 22971619 - Zfp94 protein_coding retained_intron MGP_LPJ_T0081909.1 MGP_LPJ_G0031726.1 mouse_genomes_project 7 22970798 22978991 - Zfp94 protein_coding processed_transcript MGP_LPJ_T0081910.1 MGP_LPJ_G0031726.1 mouse_genomes_project 7 22971091 22978975 - Zfp94 protein_coding retained_intron MGP_LPJ_T0081911.1 MGP_LPJ_G0031726.1 mouse_genomes_project 7 22971206 22978949 - Zfp94 protein_coding processed_transcript MGP_LPJ_T0081262.1 MGP_LPJ_G0031498.1 mouse_genomes_project 7 3294286 3318769 - MGP_LPJ_P0081262 Zfp787 protein_coding protein_coding MGP_LPJ_T0082715.1 MGP_LPJ_G0031930.1 mouse_genomes_project 7 29876850 29878161 - MGP_LPJ_P0082715 Psenen protein_coding protein_coding MGP_LPJ_T0015661.1 MGP_LPJ_G0013752.1 mouse_genomes_project 7 10691427 10692699 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010847.1 MGP_LPJ_G0008965.1 mouse_genomes_project 7 99688 99765 + Mir291b miRNA miRNA MGP_LPJ_T0010848.1 MGP_LPJ_G0008966.1 mouse_genomes_project 7 100467 100547 + Mir293 miRNA miRNA MGP_LPJ_T0084627.1 MGP_LPJ_G0032371.1 mouse_genomes_project 7 88590701 88706048 - MGP_LPJ_P0084627 protein_coding protein_coding MGP_LPJ_T0098666.1 MGP_LPJ_G0036936.1 mouse_genomes_project 7 74879031 74880071 - sense_intronic sense_intronic MGP_LPJ_T0009023.1 MGP_LPJ_G0007268.1 mouse_genomes_project 7 130264395 130363420 - 3100003L05Rik lincRNA lincRNA MGP_LPJ_T0087129.1 MGP_LPJ_G0033074.1 mouse_genomes_project 7 146629205 146656490 - MGP_LPJ_P0087129 Tubgcp2 protein_coding unknown_likely_coding MGP_LPJ_T0002283.1 MGP_LPJ_G0002191.1 mouse_genomes_project 7 76599270 76599960 - TEC TEC MGP_LPJ_T0087168.1 MGP_LPJ_G0033088.1 mouse_genomes_project 7 146875392 146932068 + MGP_LPJ_P0087168 5830411N06Rik protein_coding protein_coding MGP_LPJ_T0087169.1 MGP_LPJ_G0033088.1 mouse_genomes_project 7 146875469 146934218 + MGP_LPJ_P0087169 5830411N06Rik protein_coding protein_coding MGP_LPJ_T0087170.1 MGP_LPJ_G0033088.1 mouse_genomes_project 7 146875472 146934218 + MGP_LPJ_P0087170 5830411N06Rik protein_coding protein_coding MGP_LPJ_T0008835.1 MGP_LPJ_G0007137.1 mouse_genomes_project 7 28263254 28272770 + Gm26604 lincRNA lincRNA MGP_LPJ_T0081238.1 MGP_LPJ_G0031483.1 mouse_genomes_project 7 2094717 2095843 + MGP_LPJ_P0081238 protein_coding protein_coding MGP_LPJ_T0082981.1 MGP_LPJ_G0031978.1 mouse_genomes_project 7 33985023 34032807 - MGP_LPJ_P0082981 Lsm14a protein_coding protein_coding MGP_LPJ_T0082982.1 MGP_LPJ_G0031978.1 mouse_genomes_project 7 33985040 33994784 - MGP_LPJ_P0082982 Lsm14a protein_coding protein_coding MGP_LPJ_T0082983.1 MGP_LPJ_G0031978.1 mouse_genomes_project 7 33986094 34036434 - MGP_LPJ_P0082983 Lsm14a protein_coding nonsense_mediated_decay MGP_LPJ_T0082984.1 MGP_LPJ_G0031978.1 mouse_genomes_project 7 33986317 34012325 - MGP_LPJ_P0082984 Lsm14a protein_coding nonsense_mediated_decay MGP_LPJ_T0082985.1 MGP_LPJ_G0031978.1 mouse_genomes_project 7 33992083 33994845 - Lsm14a protein_coding retained_intron MGP_LPJ_T0082986.1 MGP_LPJ_G0031978.1 mouse_genomes_project 7 33994771 34032599 - MGP_LPJ_P0082986 Lsm14a protein_coding protein_coding MGP_LPJ_T0082987.1 MGP_LPJ_G0031978.1 mouse_genomes_project 7 33995102 34032165 - MGP_LPJ_P0082987 Lsm14a protein_coding protein_coding MGP_LPJ_T0082988.1 MGP_LPJ_G0031978.1 mouse_genomes_project 7 34029665 34032246 - Lsm14a protein_coding retained_intron MGP_LPJ_T0087192.1 MGP_LPJ_G0033108.1 mouse_genomes_project 7 147470536 147473406 + MGP_LPJ_P0087192 Urah protein_coding protein_coding MGP_LPJ_T0087193.1 MGP_LPJ_G0033108.1 mouse_genomes_project 7 147470797 147473485 + MGP_LPJ_P0087193 Urah protein_coding protein_coding MGP_LPJ_T0087194.1 MGP_LPJ_G0033108.1 mouse_genomes_project 7 147470815 147473490 + MGP_LPJ_P0087194 Urah protein_coding protein_coding MGP_LPJ_T0087195.1 MGP_LPJ_G0033108.1 mouse_genomes_project 7 147470852 147472587 + Urah protein_coding retained_intron MGP_LPJ_T0002288.1 MGP_LPJ_G0002196.1 mouse_genomes_project 7 78623992 78625290 + TEC TEC MGP_LPJ_T0085293.1 MGP_LPJ_G0032594.1 mouse_genomes_project 7 108372535 108374070 - MGP_LPJ_P0085293 Hbb-bh1 protein_coding protein_coding MGP_LPJ_T0008939.1 MGP_LPJ_G0007218.1 mouse_genomes_project 7 76628458 76641235 + lincRNA lincRNA MGP_LPJ_T0085550.1 MGP_LPJ_G0032727.1 mouse_genomes_project 7 113030640 113031705 + MGP_LPJ_P0085550 Olfr483 protein_coding protein_coding MGP_LPJ_T0002343.1 MGP_LPJ_G0002251.1 mouse_genomes_project 7 140408748 140413206 - TEC TEC MGP_LPJ_T0081164.1 MGP_LPJ_G0031460.1 mouse_genomes_project 7 1726260 1752566 + MGP_LPJ_P0081164 Brsk1 protein_coding protein_coding MGP_LPJ_T0081165.1 MGP_LPJ_G0031460.1 mouse_genomes_project 7 1726584 1752582 + MGP_LPJ_P0081165 Brsk1 protein_coding protein_coding MGP_LPJ_T0081166.1 MGP_LPJ_G0031460.1 mouse_genomes_project 7 1726736 1741161 + MGP_LPJ_P0081166 Brsk1 protein_coding protein_coding MGP_LPJ_T0081167.1 MGP_LPJ_G0031460.1 mouse_genomes_project 7 1727889 1741161 + MGP_LPJ_P0081167 Brsk1 protein_coding protein_coding MGP_LPJ_T0081169.1 MGP_LPJ_G0031460.1 mouse_genomes_project 7 1744720 1746697 + MGP_LPJ_P0081169 Brsk1 protein_coding protein_coding MGP_LPJ_T0015728.1 MGP_LPJ_G0013819.1 mouse_genomes_project 7 39682837 39683301 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002270.1 MGP_LPJ_G0002179.1 mouse_genomes_project 7 66653681 66657084 - TEC TEC MGP_LPJ_T0082188.1 MGP_LPJ_G0031800.1 mouse_genomes_project 7 26115147 26123291 - MGP_LPJ_P0082188 Egln2 protein_coding protein_coding MGP_LPJ_T0082189.1 MGP_LPJ_G0031800.1 mouse_genomes_project 7 26115148 26117360 - Egln2 protein_coding processed_transcript MGP_LPJ_T0082190.1 MGP_LPJ_G0031800.1 mouse_genomes_project 7 26115477 26122902 - MGP_LPJ_P0082190 Egln2 protein_coding protein_coding MGP_LPJ_T0082191.1 MGP_LPJ_G0031800.1 mouse_genomes_project 7 26122021 26122771 - Egln2 protein_coding processed_transcript MGP_LPJ_T0011711.1 MGP_LPJ_G0009829.1 mouse_genomes_project 7 136530432 136530508 - Gm27884 misc_RNA misc_RNA MGP_LPJ_T0102434.1 MGP_LPJ_G0040470.1 mouse_genomes_project 7 89961578 89962485 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0082972.1 MGP_LPJ_G0031976.1 mouse_genomes_project 7 33872686 33947767 - MGP_LPJ_P0082972 4931406P16Rik protein_coding protein_coding MGP_LPJ_T0082973.1 MGP_LPJ_G0031976.1 mouse_genomes_project 7 33872878 33880730 - MGP_LPJ_P0082973 4931406P16Rik protein_coding protein_coding MGP_LPJ_T0082974.1 MGP_LPJ_G0031976.1 mouse_genomes_project 7 33873879 33880541 - 4931406P16Rik protein_coding retained_intron MGP_LPJ_T0082976.1 MGP_LPJ_G0031976.1 mouse_genomes_project 7 33889218 33892386 - 4931406P16Rik protein_coding retained_intron MGP_LPJ_T0082977.1 MGP_LPJ_G0031976.1 mouse_genomes_project 7 33920215 33947806 - 4931406P16Rik protein_coding retained_intron MGP_LPJ_T0082978.1 MGP_LPJ_G0031976.1 mouse_genomes_project 7 33921737 33947801 - 4931406P16Rik protein_coding processed_transcript MGP_LPJ_T0082979.1 MGP_LPJ_G0031976.1 mouse_genomes_project 7 33921823 33939770 - 4931406P16Rik protein_coding processed_transcript MGP_LPJ_T0082980.1 MGP_LPJ_G0031976.1 mouse_genomes_project 7 33946322 33947764 - 4931406P16Rik protein_coding processed_transcript MGP_LPJ_T0082517.1 MGP_LPJ_G0031882.1 mouse_genomes_project 7 28471323 28499166 - MGP_LPJ_P0082517 Spint2 protein_coding protein_coding MGP_LPJ_T0082518.1 MGP_LPJ_G0031882.1 mouse_genomes_project 7 28471323 28499166 - MGP_LPJ_P0082518 Spint2 protein_coding protein_coding MGP_LPJ_T0081042.1 MGP_LPJ_G0031441.1 mouse_genomes_project 7 1006841 1070786 - MGP_LPJ_P0081042 Lair1 protein_coding protein_coding MGP_LPJ_T0081043.1 MGP_LPJ_G0031441.1 mouse_genomes_project 7 1010169 1070811 - MGP_LPJ_P0081043 Lair1 protein_coding protein_coding MGP_LPJ_T0081044.1 MGP_LPJ_G0031441.1 mouse_genomes_project 7 1011155 1070781 - MGP_LPJ_P0081044 Lair1 protein_coding protein_coding MGP_LPJ_T0081045.1 MGP_LPJ_G0031441.1 mouse_genomes_project 7 1012076 1070768 - MGP_LPJ_P0081045 Lair1 protein_coding nonsense_mediated_decay MGP_LPJ_T0081046.1 MGP_LPJ_G0031441.1 mouse_genomes_project 7 1012103 1070746 - MGP_LPJ_P0081046 Lair1 protein_coding nonsense_mediated_decay MGP_LPJ_T0081047.1 MGP_LPJ_G0031441.1 mouse_genomes_project 7 1012263 1026810 - Lair1 protein_coding processed_transcript MGP_LPJ_T0081048.1 MGP_LPJ_G0031441.1 mouse_genomes_project 7 1012669 1070723 - MGP_LPJ_P0081048 Lair1 protein_coding nonsense_mediated_decay MGP_LPJ_T0081049.1 MGP_LPJ_G0031441.1 mouse_genomes_project 7 1012759 1070748 - MGP_LPJ_P0081049 Lair1 protein_coding protein_coding MGP_LPJ_T0081050.1 MGP_LPJ_G0031441.1 mouse_genomes_project 7 1012759 1070748 - MGP_LPJ_P0081050 Lair1 protein_coding protein_coding MGP_LPJ_T0081051.1 MGP_LPJ_G0031441.1 mouse_genomes_project 7 1026964 1070755 - Lair1 protein_coding processed_transcript MGP_LPJ_T0084716.1 MGP_LPJ_G0032415.1 mouse_genomes_project 7 94141162 94144532 + MGP_LPJ_P0084716 Crebzf protein_coding protein_coding MGP_LPJ_T0084717.1 MGP_LPJ_G0032415.1 mouse_genomes_project 7 94141214 94146145 + MGP_LPJ_P0084717 Crebzf protein_coding protein_coding MGP_LPJ_T0084718.1 MGP_LPJ_G0032415.1 mouse_genomes_project 7 94142103 94143136 + Crebzf protein_coding processed_transcript MGP_LPJ_T0084719.1 MGP_LPJ_G0032415.1 mouse_genomes_project 7 94142103 94142811 + MGP_LPJ_P0084719 Crebzf protein_coding protein_coding MGP_LPJ_T0084720.1 MGP_LPJ_G0032415.1 mouse_genomes_project 7 94142275 94144417 + Crebzf protein_coding processed_transcript MGP_LPJ_T0084721.1 MGP_LPJ_G0032415.1 mouse_genomes_project 7 94143137 94144522 + Crebzf protein_coding processed_transcript MGP_LPJ_T0010949.1 MGP_LPJ_G0009067.1 mouse_genomes_project 7 141959845 141959966 + Mir1962 miRNA miRNA MGP_LPJ_T0082923.1 MGP_LPJ_G0031965.1 mouse_genomes_project 7 30532569 30554111 - Gramd1a protein_coding retained_intron MGP_LPJ_T0082924.1 MGP_LPJ_G0031965.1 mouse_genomes_project 7 30532569 30554181 - MGP_LPJ_P0082924 Gramd1a protein_coding protein_coding MGP_LPJ_T0082925.1 MGP_LPJ_G0031965.1 mouse_genomes_project 7 30532569 30554113 - MGP_LPJ_P0082925 Gramd1a protein_coding protein_coding MGP_LPJ_T0082926.1 MGP_LPJ_G0031965.1 mouse_genomes_project 7 30532569 30554111 - MGP_LPJ_P0082926 Gramd1a protein_coding nonsense_mediated_decay MGP_LPJ_T0082927.1 MGP_LPJ_G0031965.1 mouse_genomes_project 7 30532569 30554132 - MGP_LPJ_P0082927 Gramd1a protein_coding nonsense_mediated_decay MGP_LPJ_T0082928.1 MGP_LPJ_G0031965.1 mouse_genomes_project 7 30534792 30535798 - Gramd1a protein_coding retained_intron MGP_LPJ_T0082929.1 MGP_LPJ_G0031965.1 mouse_genomes_project 7 30535024 30540615 - MGP_LPJ_P0082929 Gramd1a protein_coding protein_coding MGP_LPJ_T0082930.1 MGP_LPJ_G0031965.1 mouse_genomes_project 7 30535272 30546185 - MGP_LPJ_P0082930 Gramd1a protein_coding nonsense_mediated_decay MGP_LPJ_T0082931.1 MGP_LPJ_G0031965.1 mouse_genomes_project 7 30538024 30542355 - MGP_LPJ_P0082931 Gramd1a protein_coding nonsense_mediated_decay MGP_LPJ_T0082932.1 MGP_LPJ_G0031965.1 mouse_genomes_project 7 30542304 30554111 - MGP_LPJ_P0082932 Gramd1a protein_coding nonsense_mediated_decay MGP_LPJ_T0082933.1 MGP_LPJ_G0031965.1 mouse_genomes_project 7 30543500 30554052 - Gramd1a protein_coding retained_intron MGP_LPJ_T0082934.1 MGP_LPJ_G0031965.1 mouse_genomes_project 7 30543608 30555168 - MGP_LPJ_P0082934 Gramd1a protein_coding protein_coding MGP_LPJ_T0082935.1 MGP_LPJ_G0031965.1 mouse_genomes_project 7 30545029 30558993 - MGP_LPJ_P0082935 Gramd1a protein_coding protein_coding MGP_LPJ_T0098302.1 MGP_LPJ_G0036583.1 mouse_genomes_project 7 34790369 34790488 + Gm22535 rRNA rRNA MGP_LPJ_T0102396.1 MGP_LPJ_G0040432.1 mouse_genomes_project 7 49168141 49168628 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008989.1 MGP_LPJ_G0007248.1 mouse_genomes_project 7 103368902 103380027 - Gm26705 lincRNA lincRNA MGP_LPJ_T0015827.1 MGP_LPJ_G0013918.1 mouse_genomes_project 7 104818542 104818895 + processed_pseudogene processed_pseudogene MGP_LPJ_T0085349.1 MGP_LPJ_G0032627.1 mouse_genomes_project 7 108892133 108940822 - MGP_LPJ_P0085349 Trim30a protein_coding protein_coding MGP_LPJ_T0085350.1 MGP_LPJ_G0032627.1 mouse_genomes_project 7 108894442 108895719 - Trim30a protein_coding retained_intron MGP_LPJ_T0085351.1 MGP_LPJ_G0032627.1 mouse_genomes_project 7 108894467 108895413 - Trim30a protein_coding processed_transcript MGP_LPJ_T0085352.1 MGP_LPJ_G0032627.1 mouse_genomes_project 7 108894782 108895365 - Trim30a protein_coding retained_intron MGP_LPJ_T0084665.1 MGP_LPJ_G0032398.1 mouse_genomes_project 7 91023697 91095511 - MGP_LPJ_P0084665 Tyr protein_coding protein_coding MGP_LPJ_T0081205.1 MGP_LPJ_G0031469.1 mouse_genomes_project 7 1837133 1858153 - MGP_LPJ_P0081205 Ube2s protein_coding nonsense_mediated_decay MGP_LPJ_T0081206.1 MGP_LPJ_G0031469.1 mouse_genomes_project 7 1849559 1854730 - Ube2s protein_coding retained_intron MGP_LPJ_T0081207.1 MGP_LPJ_G0031469.1 mouse_genomes_project 7 1850548 1858392 - MGP_LPJ_P0081207 Ube2s protein_coding protein_coding MGP_LPJ_T0081208.1 MGP_LPJ_G0031469.1 mouse_genomes_project 7 1851812 1857926 - MGP_LPJ_P0081208 Ube2s protein_coding protein_coding MGP_LPJ_T0081209.1 MGP_LPJ_G0031469.1 mouse_genomes_project 7 1854053 1857708 - MGP_LPJ_P0081209 Ube2s protein_coding protein_coding MGP_LPJ_T0085518.1 MGP_LPJ_G0032702.1 mouse_genomes_project 7 112028206 112029160 + MGP_LPJ_P0085518 Olfr714 protein_coding protein_coding MGP_LPJ_T0098303.1 MGP_LPJ_G0036584.1 mouse_genomes_project 7 68812987 68813077 - Gm23957 rRNA rRNA MGP_LPJ_T0085175.1 MGP_LPJ_G0032511.1 mouse_genomes_project 7 106455927 106461315 - MGP_LPJ_P0085175 Chrna10 protein_coding protein_coding MGP_LPJ_T0008841.1 MGP_LPJ_G0007143.1 mouse_genomes_project 7 33854939 33861766 + Gm26762 lincRNA lincRNA MGP_LPJ_T0087121.1 MGP_LPJ_G0033073.1 mouse_genomes_project 7 146610625 146625737 - Adam8 protein_coding retained_intron MGP_LPJ_T0087122.1 MGP_LPJ_G0033073.1 mouse_genomes_project 7 146610625 146621617 - Adam8 protein_coding retained_intron MGP_LPJ_T0087123.1 MGP_LPJ_G0033073.1 mouse_genomes_project 7 146610625 146625737 - MGP_LPJ_P0087123 Adam8 protein_coding protein_coding MGP_LPJ_T0087124.1 MGP_LPJ_G0033073.1 mouse_genomes_project 7 146610625 146625723 - MGP_LPJ_P0087124 Adam8 protein_coding protein_coding MGP_LPJ_T0087125.1 MGP_LPJ_G0033073.1 mouse_genomes_project 7 146611087 146612062 - Adam8 protein_coding processed_transcript MGP_LPJ_T0087126.1 MGP_LPJ_G0033073.1 mouse_genomes_project 7 146617036 146625737 - MGP_LPJ_P0087126 Adam8 protein_coding protein_coding MGP_LPJ_T0087127.1 MGP_LPJ_G0033073.1 mouse_genomes_project 7 146620836 146621613 - Adam8 protein_coding processed_transcript MGP_LPJ_T0087128.1 MGP_LPJ_G0033073.1 mouse_genomes_project 7 146622601 146625683 - MGP_LPJ_P0087128 Adam8 protein_coding nonsense_mediated_decay MGP_LPJ_T0010941.1 MGP_LPJ_G0009059.1 mouse_genomes_project 7 132327561 132327620 - Mir7059 miRNA miRNA MGP_LPJ_T0008873.1 MGP_LPJ_G0007168.1 mouse_genomes_project 7 40703444 40719609 + 4933402C06Rik lincRNA lincRNA MGP_LPJ_T0008874.1 MGP_LPJ_G0007168.1 mouse_genomes_project 7 40703444 40712044 + 4933402C06Rik lincRNA lincRNA MGP_LPJ_T0085294.1 MGP_LPJ_G0032595.1 mouse_genomes_project 7 108385975 108387475 - MGP_LPJ_P0085294 Hbb-y protein_coding protein_coding MGP_LPJ_T0084804.1 MGP_LPJ_G0032435.1 mouse_genomes_project 7 101576919 101602316 - MGP_LPJ_P0084804 Aamdc protein_coding protein_coding MGP_LPJ_T0084805.1 MGP_LPJ_G0032435.1 mouse_genomes_project 7 101576922 101606145 - MGP_LPJ_P0084805 Aamdc protein_coding protein_coding MGP_LPJ_T0084806.1 MGP_LPJ_G0032435.1 mouse_genomes_project 7 101576927 101606149 - MGP_LPJ_P0084806 Aamdc protein_coding protein_coding MGP_LPJ_T0084807.1 MGP_LPJ_G0032435.1 mouse_genomes_project 7 101576928 101606064 - MGP_LPJ_P0084807 Aamdc protein_coding nonsense_mediated_decay MGP_LPJ_T0084808.1 MGP_LPJ_G0032435.1 mouse_genomes_project 7 101576935 101606152 - Aamdc protein_coding processed_transcript MGP_LPJ_T0084809.1 MGP_LPJ_G0032435.1 mouse_genomes_project 7 101577130 101606107 - MGP_LPJ_P0084809 Aamdc protein_coding protein_coding MGP_LPJ_T0084810.1 MGP_LPJ_G0032435.1 mouse_genomes_project 7 101577136 101606108 - MGP_LPJ_P0084810 Aamdc protein_coding nonsense_mediated_decay MGP_LPJ_T0084811.1 MGP_LPJ_G0032435.1 mouse_genomes_project 7 101577153 101606140 - MGP_LPJ_P0084811 Aamdc protein_coding protein_coding MGP_LPJ_T0084812.1 MGP_LPJ_G0032435.1 mouse_genomes_project 7 101577258 101606085 - MGP_LPJ_P0084812 Aamdc protein_coding protein_coding MGP_LPJ_T0084813.1 MGP_LPJ_G0032435.1 mouse_genomes_project 7 101577303 101606048 - MGP_LPJ_P0084813 Aamdc protein_coding protein_coding MGP_LPJ_T0084814.1 MGP_LPJ_G0032435.1 mouse_genomes_project 7 101602562 101604893 - Aamdc protein_coding retained_intron MGP_LPJ_T0081859.1 MGP_LPJ_G0031706.1 mouse_genomes_project 7 18356252 18384374 + MGP_LPJ_P0081859 Ceacam20 protein_coding protein_coding MGP_LPJ_T0100958.1 MGP_LPJ_G0039221.1 mouse_genomes_project 7 59971961 59972095 + Gm23911 snoRNA snoRNA MGP_LPJ_T0082766.1 MGP_LPJ_G0031937.1 mouse_genomes_project 7 29950101 29952359 - MGP_LPJ_P0082766 Etv2 protein_coding protein_coding MGP_LPJ_T0082863.1 MGP_LPJ_G0031958.1 mouse_genomes_project 7 30431598 30440638 - MGP_LPJ_P0082863 Fxyd5 protein_coding protein_coding MGP_LPJ_T0082864.1 MGP_LPJ_G0031958.1 mouse_genomes_project 7 30431602 30441280 - MGP_LPJ_P0082864 Fxyd5 protein_coding protein_coding MGP_LPJ_T0082865.1 MGP_LPJ_G0031958.1 mouse_genomes_project 7 30431606 30439221 - Fxyd5 protein_coding retained_intron MGP_LPJ_T0082866.1 MGP_LPJ_G0031958.1 mouse_genomes_project 7 30431606 30436789 - Fxyd5 protein_coding retained_intron MGP_LPJ_T0082867.1 MGP_LPJ_G0031958.1 mouse_genomes_project 7 30431606 30440917 - MGP_LPJ_P0082867 Fxyd5 protein_coding protein_coding MGP_LPJ_T0082868.1 MGP_LPJ_G0031958.1 mouse_genomes_project 7 30431606 30437843 - MGP_LPJ_P0082868 Fxyd5 protein_coding protein_coding MGP_LPJ_T0082869.1 MGP_LPJ_G0031958.1 mouse_genomes_project 7 30431609 30440877 - MGP_LPJ_P0082869 Fxyd5 protein_coding protein_coding MGP_LPJ_T0082870.1 MGP_LPJ_G0031958.1 mouse_genomes_project 7 30431609 30440877 - MGP_LPJ_P0082870 Fxyd5 protein_coding protein_coding MGP_LPJ_T0082871.1 MGP_LPJ_G0031958.1 mouse_genomes_project 7 30431639 30440945 - MGP_LPJ_P0082871 Fxyd5 protein_coding protein_coding MGP_LPJ_T0082872.1 MGP_LPJ_G0031958.1 mouse_genomes_project 7 30431683 30440939 - MGP_LPJ_P0082872 Fxyd5 protein_coding protein_coding MGP_LPJ_T0082873.1 MGP_LPJ_G0031958.1 mouse_genomes_project 7 30435319 30440915 - MGP_LPJ_P0082873 Fxyd5 protein_coding protein_coding MGP_LPJ_T0082874.1 MGP_LPJ_G0031958.1 mouse_genomes_project 7 30435348 30440912 - MGP_LPJ_P0082874 Fxyd5 protein_coding protein_coding MGP_LPJ_T0082875.1 MGP_LPJ_G0031958.1 mouse_genomes_project 7 30435350 30440886 - MGP_LPJ_P0082875 Fxyd5 protein_coding protein_coding MGP_LPJ_T0082876.1 MGP_LPJ_G0031958.1 mouse_genomes_project 7 30439969 30440939 - Fxyd5 protein_coding retained_intron MGP_LPJ_T0100980.1 MGP_LPJ_G0039243.1 mouse_genomes_project 7 103592954 103593099 - Snord15b snoRNA snoRNA MGP_LPJ_T0085370.1 MGP_LPJ_G0032642.1 mouse_genomes_project 7 109451219 109452176 - MGP_LPJ_P0085370 Olfr668 protein_coding protein_coding MGP_LPJ_T0083859.1 MGP_LPJ_G0032214.1 mouse_genomes_project 7 53577108 53714934 + MGP_LPJ_P0083859 Gas2 protein_coding nonsense_mediated_decay MGP_LPJ_T0083860.1 MGP_LPJ_G0032214.1 mouse_genomes_project 7 53577520 53685948 + MGP_LPJ_P0083860 Gas2 protein_coding protein_coding MGP_LPJ_T0083861.1 MGP_LPJ_G0032214.1 mouse_genomes_project 7 53578997 53579491 + Gas2 protein_coding retained_intron MGP_LPJ_T0083862.1 MGP_LPJ_G0032214.1 mouse_genomes_project 7 53596444 53714412 + MGP_LPJ_P0083862 Gas2 protein_coding protein_coding MGP_LPJ_T0083863.1 MGP_LPJ_G0032214.1 mouse_genomes_project 7 53596527 53714417 + MGP_LPJ_P0083863 Gas2 protein_coding protein_coding MGP_LPJ_T0083864.1 MGP_LPJ_G0032214.1 mouse_genomes_project 7 53597808 53664158 + MGP_LPJ_P0083864 Gas2 protein_coding protein_coding MGP_LPJ_T0083865.1 MGP_LPJ_G0032214.1 mouse_genomes_project 7 53646582 53664196 + Gas2 protein_coding processed_transcript MGP_LPJ_T0083866.1 MGP_LPJ_G0032214.1 mouse_genomes_project 7 53664112 53676395 + Gas2 protein_coding processed_transcript MGP_LPJ_T0015682.1 MGP_LPJ_G0013773.1 mouse_genomes_project 7 17112816 17113386 + processed_pseudogene processed_pseudogene MGP_LPJ_T0086699.1 MGP_LPJ_G0032982.1 mouse_genomes_project 7 133782294 133786683 - MGP_LPJ_P0086699 Prss8 protein_coding protein_coding MGP_LPJ_T0086700.1 MGP_LPJ_G0032982.1 mouse_genomes_project 7 133782294 133786683 - MGP_LPJ_P0086700 Prss8 protein_coding protein_coding MGP_LPJ_T0086701.1 MGP_LPJ_G0032982.1 mouse_genomes_project 7 133783340 133786674 - MGP_LPJ_P0086701 Prss8 protein_coding nonsense_mediated_decay MGP_LPJ_T0082589.1 MGP_LPJ_G0031900.1 mouse_genomes_project 7 29342777 29382405 - MGP_LPJ_P0082589 Gm26920 protein_coding nonsense_mediated_decay MGP_LPJ_T0002290.1 MGP_LPJ_G0002198.1 mouse_genomes_project 7 78993000 79000450 + TEC TEC MGP_LPJ_T0015863.1 MGP_LPJ_G0013954.1 mouse_genomes_project 7 131950645 131950893 - processed_pseudogene processed_pseudogene MGP_LPJ_T0082179.1 MGP_LPJ_G0031796.1 mouse_genomes_project 7 25914858 25924234 + Cyp2a22 protein_coding retained_intron MGP_LPJ_T0082180.1 MGP_LPJ_G0031796.1 mouse_genomes_project 7 25914862 25923810 + MGP_LPJ_P0082180 Cyp2a22 protein_coding protein_coding MGP_LPJ_T0087636.1 MGP_LPJ_G0033199.1 mouse_genomes_project 7 150669616 150697682 - MGP_LPJ_P0087636 Nadsyn1 protein_coding protein_coding MGP_LPJ_T0087637.1 MGP_LPJ_G0033199.1 mouse_genomes_project 7 150669882 150697628 - MGP_LPJ_P0087637 Nadsyn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0087638.1 MGP_LPJ_G0033199.1 mouse_genomes_project 7 150669901 150697683 - MGP_LPJ_P0087638 Nadsyn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0087639.1 MGP_LPJ_G0033199.1 mouse_genomes_project 7 150671881 150672874 - Nadsyn1 protein_coding retained_intron MGP_LPJ_T0087640.1 MGP_LPJ_G0033199.1 mouse_genomes_project 7 150686651 150697659 - MGP_LPJ_P0087640 Nadsyn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0087641.1 MGP_LPJ_G0033199.1 mouse_genomes_project 7 150687174 150697589 - Nadsyn1 protein_coding retained_intron MGP_LPJ_T0087642.1 MGP_LPJ_G0033199.1 mouse_genomes_project 7 150687312 150697646 - MGP_LPJ_P0087642 Nadsyn1 protein_coding protein_coding MGP_LPJ_T0087643.1 MGP_LPJ_G0033199.1 mouse_genomes_project 7 150689226 150697690 - Nadsyn1 protein_coding retained_intron MGP_LPJ_T0008919.1 MGP_LPJ_G0007201.1 mouse_genomes_project 7 74622266 74659306 + 4930441H08Rik lincRNA lincRNA MGP_LPJ_T0018279.1 MGP_LPJ_G0015572.1 mouse_genomes_project 7 23539074 23558954 + Gm5893 processed_transcript lincRNA MGP_LPJ_T0018280.1 MGP_LPJ_G0015572.1 mouse_genomes_project 7 23539074 23558937 + Gm5893 processed_transcript processed_transcript MGP_LPJ_T0018281.1 MGP_LPJ_G0015572.1 mouse_genomes_project 7 23542388 23546152 + Gm5893 processed_transcript retained_intron MGP_LPJ_T0081242.1 MGP_LPJ_G0031487.1 mouse_genomes_project 7 2118877 2122932 + MGP_LPJ_P0081242 Ccdc106 protein_coding protein_coding MGP_LPJ_T0084826.1 MGP_LPJ_G0032438.1 mouse_genomes_project 7 101752347 101766662 - MGP_LPJ_P0084826 Aqp11 protein_coding protein_coding MGP_LPJ_T0084827.1 MGP_LPJ_G0032438.1 mouse_genomes_project 7 101754721 101766311 - MGP_LPJ_P0084827 Aqp11 protein_coding protein_coding MGP_LPJ_T0084828.1 MGP_LPJ_G0032438.1 mouse_genomes_project 7 101754889 101757733 - Aqp11 protein_coding retained_intron MGP_LPJ_T0084829.1 MGP_LPJ_G0032438.1 mouse_genomes_project 7 101755770 101761608 - Aqp11 protein_coding retained_intron MGP_LPJ_T0084830.1 MGP_LPJ_G0032438.1 mouse_genomes_project 7 101757395 101758850 - Aqp11 protein_coding processed_transcript MGP_LPJ_T0083312.1 MGP_LPJ_G0032069.1 mouse_genomes_project 7 45318377 45320746 + MGP_LPJ_P0083312 Aspdh protein_coding protein_coding MGP_LPJ_T0083313.1 MGP_LPJ_G0032069.1 mouse_genomes_project 7 45318395 45320322 + MGP_LPJ_P0083313 Aspdh protein_coding protein_coding MGP_LPJ_T0083314.1 MGP_LPJ_G0032069.1 mouse_genomes_project 7 45318403 45320209 + MGP_LPJ_P0083314 Aspdh protein_coding nonsense_mediated_decay MGP_LPJ_T0083315.1 MGP_LPJ_G0032069.1 mouse_genomes_project 7 45318412 45320200 + Aspdh protein_coding retained_intron MGP_LPJ_T0083316.1 MGP_LPJ_G0032069.1 mouse_genomes_project 7 45318430 45320304 + Aspdh protein_coding processed_transcript MGP_LPJ_T0083317.1 MGP_LPJ_G0032069.1 mouse_genomes_project 7 45319456 45320683 + MGP_LPJ_P0083317 Aspdh protein_coding protein_coding MGP_LPJ_T0015715.1 MGP_LPJ_G0013806.1 mouse_genomes_project 7 33473197 33473264 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008922.1 MGP_LPJ_G0007204.1 mouse_genomes_project 7 75399863 75400168 - Gm28745 lincRNA lincRNA MGP_LPJ_T0085284.1 MGP_LPJ_G0032587.1 mouse_genomes_project 7 108261865 108262931 - MGP_LPJ_P0085284 Olfr630 protein_coding protein_coding MGP_LPJ_T0084895.1 MGP_LPJ_G0032451.1 mouse_genomes_project 7 102921120 102932597 + MGP_LPJ_P0084895 Wnt11 protein_coding protein_coding MGP_LPJ_T0084896.1 MGP_LPJ_G0032451.1 mouse_genomes_project 7 102921120 102939821 + MGP_LPJ_P0084896 Wnt11 protein_coding nonsense_mediated_decay MGP_LPJ_T0084897.1 MGP_LPJ_G0032451.1 mouse_genomes_project 7 102921139 102941205 + MGP_LPJ_P0084897 Wnt11 protein_coding protein_coding MGP_LPJ_T0084898.1 MGP_LPJ_G0032451.1 mouse_genomes_project 7 102924856 102939761 + MGP_LPJ_P0084898 Wnt11 protein_coding protein_coding MGP_LPJ_T0084899.1 MGP_LPJ_G0032451.1 mouse_genomes_project 7 102924909 102939581 + MGP_LPJ_P0084899 Wnt11 protein_coding nonsense_mediated_decay MGP_LPJ_T0086751.1 MGP_LPJ_G0032994.1 mouse_genomes_project 7 134133948 134144174 + MGP_LPJ_P0086751 protein_coding protein_coding MGP_LPJ_T0086752.1 MGP_LPJ_G0032994.1 mouse_genomes_project 7 134135415 134141882 + MGP_LPJ_P0086752 protein_coding nonsense_mediated_decay MGP_LPJ_T0086753.1 MGP_LPJ_G0032994.1 mouse_genomes_project 7 134135450 134142188 + MGP_LPJ_P0086753 protein_coding nonsense_mediated_decay MGP_LPJ_T0086754.1 MGP_LPJ_G0032994.1 mouse_genomes_project 7 134135450 134141843 + MGP_LPJ_P0086754 protein_coding protein_coding MGP_LPJ_T0086755.1 MGP_LPJ_G0032994.1 mouse_genomes_project 7 134136476 134142188 + protein_coding retained_intron MGP_LPJ_T0086756.1 MGP_LPJ_G0032994.1 mouse_genomes_project 7 134136476 134142188 + protein_coding retained_intron MGP_LPJ_T0086757.1 MGP_LPJ_G0032994.1 mouse_genomes_project 7 134136476 134142188 + protein_coding retained_intron MGP_LPJ_T0086758.1 MGP_LPJ_G0032994.1 mouse_genomes_project 7 134136476 134142188 + protein_coding retained_intron MGP_LPJ_T0086759.1 MGP_LPJ_G0032994.1 mouse_genomes_project 7 134136476 134142188 + protein_coding retained_intron MGP_LPJ_T0086760.1 MGP_LPJ_G0032994.1 mouse_genomes_project 7 134136634 134141844 + MGP_LPJ_P0086760 protein_coding nonsense_mediated_decay MGP_LPJ_T0082412.1 MGP_LPJ_G0031858.1 mouse_genomes_project 7 27897610 27898037 - Mrps12 protein_coding processed_transcript MGP_LPJ_T0082413.1 MGP_LPJ_G0031858.1 mouse_genomes_project 7 27897610 27901417 - MGP_LPJ_P0082413 Mrps12 protein_coding protein_coding MGP_LPJ_T0082414.1 MGP_LPJ_G0031858.1 mouse_genomes_project 7 27897611 27901467 - MGP_LPJ_P0082414 Mrps12 protein_coding protein_coding MGP_LPJ_T0082415.1 MGP_LPJ_G0031858.1 mouse_genomes_project 7 27897861 27898791 - MGP_LPJ_P0082415 Mrps12 protein_coding protein_coding MGP_LPJ_T0015738.1 MGP_LPJ_G0013829.1 mouse_genomes_project 7 42927804 42928286 - processed_pseudogene processed_pseudogene MGP_LPJ_T0086017.1 MGP_LPJ_G0032854.1 mouse_genomes_project 7 126441965 126474952 + MGP_LPJ_P0086017 Mfsd13b protein_coding protein_coding MGP_LPJ_T0086018.1 MGP_LPJ_G0032854.1 mouse_genomes_project 7 126441981 126450922 + MGP_LPJ_P0086018 Mfsd13b protein_coding protein_coding MGP_LPJ_T0086019.1 MGP_LPJ_G0032854.1 mouse_genomes_project 7 126441984 126448531 + MGP_LPJ_P0086019 Mfsd13b protein_coding protein_coding MGP_LPJ_T0086020.1 MGP_LPJ_G0032854.1 mouse_genomes_project 7 126451276 126474952 + MGP_LPJ_P0086020 Mfsd13b protein_coding protein_coding MGP_LPJ_T0083629.1 MGP_LPJ_G0032146.1 mouse_genomes_project 7 46695153 46705661 + MGP_LPJ_P0083629 Ntn5 protein_coding protein_coding MGP_LPJ_T0083630.1 MGP_LPJ_G0032146.1 mouse_genomes_project 7 46695515 46705664 + MGP_LPJ_P0083630 Ntn5 protein_coding protein_coding MGP_LPJ_T0083631.1 MGP_LPJ_G0032146.1 mouse_genomes_project 7 46695528 46705535 + MGP_LPJ_P0083631 Ntn5 protein_coding protein_coding MGP_LPJ_T0081305.1 MGP_LPJ_G0031516.1 mouse_genomes_project 7 3773442 3774369 + MGP_LPJ_P0081305 Olfr1350 protein_coding protein_coding MGP_LPJ_T0005207.1 MGP_LPJ_G0004433.1 mouse_genomes_project 7 29769813 29773230 - Nphs1os antisense antisense MGP_LPJ_T0086875.1 MGP_LPJ_G0033010.1 mouse_genomes_project 7 136797400 136852571 + MGP_LPJ_P0086875 Btbd16 protein_coding protein_coding MGP_LPJ_T0083705.1 MGP_LPJ_G0032165.1 mouse_genomes_project 7 47084479 47135726 + MGP_LPJ_P0083705 Nomo1 protein_coding protein_coding MGP_LPJ_T0083706.1 MGP_LPJ_G0032165.1 mouse_genomes_project 7 47101525 47102306 + Nomo1 protein_coding retained_intron MGP_LPJ_T0083707.1 MGP_LPJ_G0032165.1 mouse_genomes_project 7 47105634 47108651 + Nomo1 protein_coding retained_intron MGP_LPJ_T0083708.1 MGP_LPJ_G0032165.1 mouse_genomes_project 7 47109923 47112675 + Nomo1 protein_coding retained_intron MGP_LPJ_T0083709.1 MGP_LPJ_G0032165.1 mouse_genomes_project 7 47134158 47135318 + Nomo1 protein_coding retained_intron MGP_LPJ_T0005340.1 MGP_LPJ_G0004528.1 mouse_genomes_project 7 149934720 149940298 - Gm28821 antisense antisense MGP_LPJ_T0081867.1 MGP_LPJ_G0031713.1 mouse_genomes_project 7 22212999 22221719 + MGP_LPJ_P0081867 Vmn1r173 protein_coding protein_coding MGP_LPJ_T0015765.1 MGP_LPJ_G0013856.1 mouse_genomes_project 7 58740525 58740786 - processed_pseudogene processed_pseudogene MGP_LPJ_T0085976.1 MGP_LPJ_G0032844.1 mouse_genomes_project 7 125612141 125656846 + Abca14 protein_coding processed_transcript MGP_LPJ_T0085977.1 MGP_LPJ_G0032844.1 mouse_genomes_project 7 125612144 125725574 + MGP_LPJ_P0085977 Abca14 protein_coding protein_coding MGP_LPJ_T0085978.1 MGP_LPJ_G0032844.1 mouse_genomes_project 7 125612184 125621207 + Abca14 protein_coding retained_intron MGP_LPJ_T0085979.1 MGP_LPJ_G0032844.1 mouse_genomes_project 7 125612187 125624463 + Abca14 protein_coding processed_transcript MGP_LPJ_T0015641.1 MGP_LPJ_G0013732.1 mouse_genomes_project 7 1002566 1002846 - processed_pseudogene processed_pseudogene MGP_LPJ_T0084638.1 MGP_LPJ_G0032381.1 mouse_genomes_project 7 89855216 89856228 - MGP_LPJ_P0084638 Olfr307 protein_coding protein_coding MGP_LPJ_T0083273.1 MGP_LPJ_G0032060.1 mouse_genomes_project 7 45021327 45047225 + MGP_LPJ_P0083273 Klk1b5 protein_coding protein_coding MGP_LPJ_T0081330.1 MGP_LPJ_G0031531.1 mouse_genomes_project 7 7957643 7958540 + MGP_LPJ_P0081330 Vmn1r70 protein_coding protein_coding MGP_LPJ_T0083272.1 MGP_LPJ_G0032059.1 mouse_genomes_project 7 44859398 44862691 + MGP_LPJ_P0083272 Klk1b27 protein_coding protein_coding MGP_LPJ_T0083973.1 MGP_LPJ_G0032239.1 mouse_genomes_project 7 66264937 66269630 + MGP_LPJ_P0083973 E030018B13Rik protein_coding protein_coding MGP_LPJ_T0015729.1 MGP_LPJ_G0013820.1 mouse_genomes_project 7 39750685 39751228 - processed_pseudogene processed_pseudogene MGP_LPJ_T0085637.1 MGP_LPJ_G0032769.1 mouse_genomes_project 7 115011441 115049005 + MGP_LPJ_P0085637 Ipo7 protein_coding protein_coding MGP_LPJ_T0087493.1 MGP_LPJ_G0033173.1 mouse_genomes_project 7 149208002 149210605 + MGP_LPJ_P0087493 Tnni2 protein_coding protein_coding MGP_LPJ_T0087494.1 MGP_LPJ_G0033173.1 mouse_genomes_project 7 149208010 149210231 + MGP_LPJ_P0087494 Tnni2 protein_coding protein_coding MGP_LPJ_T0087495.1 MGP_LPJ_G0033173.1 mouse_genomes_project 7 149208524 149210563 + MGP_LPJ_P0087495 Tnni2 protein_coding protein_coding MGP_LPJ_T0087496.1 MGP_LPJ_G0033173.1 mouse_genomes_project 7 149209102 149210603 + Tnni2 protein_coding retained_intron MGP_LPJ_T0087497.1 MGP_LPJ_G0033173.1 mouse_genomes_project 7 149209174 149210054 + Tnni2 protein_coding retained_intron MGP_LPJ_T0087498.1 MGP_LPJ_G0033173.1 mouse_genomes_project 7 149209365 149210600 + MGP_LPJ_P0087498 Tnni2 protein_coding protein_coding MGP_LPJ_T0099732.1 MGP_LPJ_G0037995.1 mouse_genomes_project 7 117005087 117005237 - Gm23345 snRNA snRNA MGP_LPJ_T0099719.1 MGP_LPJ_G0037982.1 mouse_genomes_project 7 91710229 91710293 - Gm24249 snRNA snRNA MGP_LPJ_T0009036.1 MGP_LPJ_G0007277.1 mouse_genomes_project 7 132609745 132618954 + Gm44854 lincRNA lincRNA MGP_LPJ_T0015880.1 MGP_LPJ_G0013971.1 mouse_genomes_project 7 134603408 134603858 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015703.1 MGP_LPJ_G0013794.1 mouse_genomes_project 7 26091812 26092055 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008843.1 MGP_LPJ_G0007145.1 mouse_genomes_project 7 34083131 34169327 + Gm12766 lincRNA lincRNA MGP_LPJ_T0100961.1 MGP_LPJ_G0039224.1 mouse_genomes_project 7 61284323 61284402 - Gm24966 snoRNA snoRNA MGP_LPJ_T0010940.1 MGP_LPJ_G0009058.1 mouse_genomes_project 7 132095826 132095901 - Mir7058 miRNA miRNA MGP_LPJ_T0082896.1 MGP_LPJ_G0031961.1 mouse_genomes_project 7 30458127 30469835 + MGP_LPJ_P0082896 Lgi4 protein_coding protein_coding MGP_LPJ_T0082897.1 MGP_LPJ_G0031961.1 mouse_genomes_project 7 30459363 30462467 + MGP_LPJ_P0082897 Lgi4 protein_coding nonsense_mediated_decay MGP_LPJ_T0082898.1 MGP_LPJ_G0031961.1 mouse_genomes_project 7 30459401 30462873 + MGP_LPJ_P0082898 Lgi4 protein_coding nonsense_mediated_decay MGP_LPJ_T0082899.1 MGP_LPJ_G0031961.1 mouse_genomes_project 7 30462347 30463395 + MGP_LPJ_P0082899 Lgi4 protein_coding protein_coding MGP_LPJ_T0086774.1 MGP_LPJ_G0032997.1 mouse_genomes_project 7 134160922 134164503 - BC017158 protein_coding retained_intron MGP_LPJ_T0086775.1 MGP_LPJ_G0032997.1 mouse_genomes_project 7 134160922 134187273 - MGP_LPJ_P0086775 BC017158 protein_coding protein_coding MGP_LPJ_T0086776.1 MGP_LPJ_G0032997.1 mouse_genomes_project 7 134161768 134187211 - BC017158 protein_coding retained_intron MGP_LPJ_T0086777.1 MGP_LPJ_G0032997.1 mouse_genomes_project 7 134161768 134187212 - BC017158 protein_coding retained_intron MGP_LPJ_T0086778.1 MGP_LPJ_G0032997.1 mouse_genomes_project 7 134161987 134187198 - MGP_LPJ_P0086778 BC017158 protein_coding nonsense_mediated_decay MGP_LPJ_T0086779.1 MGP_LPJ_G0032997.1 mouse_genomes_project 7 134165619 134186678 - BC017158 protein_coding retained_intron MGP_LPJ_T0086780.1 MGP_LPJ_G0032997.1 mouse_genomes_project 7 134165954 134177840 - BC017158 protein_coding retained_intron MGP_LPJ_T0086781.1 MGP_LPJ_G0032997.1 mouse_genomes_project 7 134177088 134179773 - MGP_LPJ_P0086781 BC017158 protein_coding protein_coding MGP_LPJ_T0010857.1 MGP_LPJ_G0008975.1 mouse_genomes_project 7 9809941 9810051 - Gm23521 miRNA miRNA MGP_LPJ_T0084098.1 MGP_LPJ_G0032262.1 mouse_genomes_project 7 69302662 69436568 + Adamts17 protein_coding retained_intron MGP_LPJ_T0084099.1 MGP_LPJ_G0032262.1 mouse_genomes_project 7 69302662 69496083 + Adamts17 protein_coding retained_intron MGP_LPJ_T0084100.1 MGP_LPJ_G0032262.1 mouse_genomes_project 7 69302662 69628179 + MGP_LPJ_P0084100 Adamts17 protein_coding protein_coding MGP_LPJ_T0084101.1 MGP_LPJ_G0032262.1 mouse_genomes_project 7 69302740 69628183 + MGP_LPJ_P0084101 Adamts17 protein_coding protein_coding MGP_LPJ_T0084102.1 MGP_LPJ_G0032262.1 mouse_genomes_project 7 69305182 69534650 + Adamts17 protein_coding processed_transcript MGP_LPJ_T0084103.1 MGP_LPJ_G0032262.1 mouse_genomes_project 7 69312643 69334826 + Adamts17 protein_coding processed_transcript MGP_LPJ_T0084104.1 MGP_LPJ_G0032262.1 mouse_genomes_project 7 69377284 69436568 + Adamts17 protein_coding processed_transcript MGP_LPJ_T0084105.1 MGP_LPJ_G0032262.1 mouse_genomes_project 7 69518444 69552332 + MGP_LPJ_P0084105 Adamts17 protein_coding protein_coding MGP_LPJ_T0102319.1 MGP_LPJ_G0040356.1 mouse_genomes_project 7 11939157 11939728 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002244.1 MGP_LPJ_G0002153.1 mouse_genomes_project 7 39797250 39800249 + TEC TEC MGP_LPJ_T0083998.1 MGP_LPJ_G0032241.1 mouse_genomes_project 7 66656526 66678874 + Mtmr10 protein_coding retained_intron MGP_LPJ_T0083999.1 MGP_LPJ_G0032241.1 mouse_genomes_project 7 66656543 66716272 + MGP_LPJ_P0083999 Mtmr10 protein_coding protein_coding MGP_LPJ_T0084000.1 MGP_LPJ_G0032241.1 mouse_genomes_project 7 66656655 66713495 + MGP_LPJ_P0084000 Mtmr10 protein_coding nonsense_mediated_decay MGP_LPJ_T0084001.1 MGP_LPJ_G0032241.1 mouse_genomes_project 7 66676334 66696693 + MGP_LPJ_P0084001 Mtmr10 protein_coding nonsense_mediated_decay MGP_LPJ_T0082338.1 MGP_LPJ_G0031836.1 mouse_genomes_project 7 27262048 27281205 + MGP_LPJ_P0082338 Fbl protein_coding protein_coding MGP_LPJ_T0085232.1 MGP_LPJ_G0032539.1 mouse_genomes_project 7 107278681 107279632 + MGP_LPJ_P0085232 Olfr568 protein_coding protein_coding MGP_LPJ_T0102443.1 MGP_LPJ_G0040479.1 mouse_genomes_project 7 107584587 107585440 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0083846.1 MGP_LPJ_G0032208.1 mouse_genomes_project 7 51536317 51593606 + MGP_LPJ_P0083846 Slc6a5 protein_coding protein_coding MGP_LPJ_T0083847.1 MGP_LPJ_G0032208.1 mouse_genomes_project 7 51537871 51589255 + MGP_LPJ_P0083847 Slc6a5 protein_coding protein_coding MGP_LPJ_T0002341.1 MGP_LPJ_G0002249.1 mouse_genomes_project 7 134450115 134450721 + TEC TEC MGP_LPJ_T0015744.1 MGP_LPJ_G0013835.1 mouse_genomes_project 7 43752182 43752530 - processed_pseudogene processed_pseudogene MGP_LPJ_T0082676.1 MGP_LPJ_G0031921.1 mouse_genomes_project 7 29728282 29735280 + MGP_LPJ_P0082676 Nfkbid protein_coding protein_coding MGP_LPJ_T0082677.1 MGP_LPJ_G0031921.1 mouse_genomes_project 7 29728956 29735279 + MGP_LPJ_P0082677 Nfkbid protein_coding protein_coding MGP_LPJ_T0082678.1 MGP_LPJ_G0031921.1 mouse_genomes_project 7 29729811 29735280 + MGP_LPJ_P0082678 Nfkbid protein_coding protein_coding MGP_LPJ_T0082679.1 MGP_LPJ_G0031921.1 mouse_genomes_project 7 29732093 29732797 + Nfkbid protein_coding retained_intron MGP_LPJ_T0002266.1 MGP_LPJ_G0002175.1 mouse_genomes_project 7 66303299 66304827 + TEC TEC MGP_LPJ_T0082418.1 MGP_LPJ_G0031861.1 mouse_genomes_project 7 27918121 27926511 - MGP_LPJ_P0082418 Nfkbib protein_coding protein_coding MGP_LPJ_T0082419.1 MGP_LPJ_G0031861.1 mouse_genomes_project 7 27918902 27926385 - MGP_LPJ_P0082419 Nfkbib protein_coding protein_coding MGP_LPJ_T0082420.1 MGP_LPJ_G0031861.1 mouse_genomes_project 7 27921639 27927383 - MGP_LPJ_P0082420 Nfkbib protein_coding protein_coding MGP_LPJ_T0081302.1 MGP_LPJ_G0031513.1 mouse_genomes_project 7 3692389 3695375 - MGP_LPJ_P0081302 protein_coding protein_coding MGP_LPJ_T0085675.1 MGP_LPJ_G0032778.1 mouse_genomes_project 7 115874992 115887230 - MGP_LPJ_P0085675 Lyve1 protein_coding protein_coding MGP_LPJ_T0081144.1 MGP_LPJ_G0031456.1 mouse_genomes_project 7 1559896 1634732 - MGP_LPJ_P0081144 Ptprh protein_coding nonsense_mediated_decay MGP_LPJ_T0081145.1 MGP_LPJ_G0031456.1 mouse_genomes_project 7 1560211 1635632 - MGP_LPJ_P0081145 Ptprh protein_coding protein_coding MGP_LPJ_T0081146.1 MGP_LPJ_G0031456.1 mouse_genomes_project 7 1563846 1573347 - Ptprh protein_coding retained_intron MGP_LPJ_T0081147.1 MGP_LPJ_G0031456.1 mouse_genomes_project 7 1605882 1634730 - Ptprh protein_coding processed_transcript MGP_LPJ_T0015848.1 MGP_LPJ_G0013939.1 mouse_genomes_project 7 120358375 120358715 + processed_pseudogene processed_pseudogene MGP_LPJ_T0082716.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878238 29880341 + MGP_LPJ_P0082716 protein_coding protein_coding MGP_LPJ_T0082717.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878277 29880331 + protein_coding processed_transcript MGP_LPJ_T0082718.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878283 29880102 + protein_coding processed_transcript MGP_LPJ_T0082719.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878295 29879458 + MGP_LPJ_P0082719 protein_coding nonsense_mediated_decay MGP_LPJ_T0082720.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878301 29880339 + MGP_LPJ_P0082720 protein_coding protein_coding MGP_LPJ_T0082721.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878302 29879584 + protein_coding retained_intron MGP_LPJ_T0082722.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878302 29880328 + MGP_LPJ_P0082722 protein_coding protein_coding MGP_LPJ_T0082723.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878305 29879588 + protein_coding retained_intron MGP_LPJ_T0082724.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878306 29879585 + protein_coding retained_intron MGP_LPJ_T0082725.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878312 29880137 + MGP_LPJ_P0082725 protein_coding nonsense_mediated_decay MGP_LPJ_T0082726.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878314 29879775 + MGP_LPJ_P0082726 protein_coding nonsense_mediated_decay MGP_LPJ_T0082727.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878315 29880141 + MGP_LPJ_P0082727 protein_coding nonsense_mediated_decay MGP_LPJ_T0082728.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878316 29879036 + protein_coding retained_intron MGP_LPJ_T0082729.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878318 29880221 + protein_coding retained_intron MGP_LPJ_T0082730.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878320 29879715 + MGP_LPJ_P0082730 protein_coding nonsense_mediated_decay MGP_LPJ_T0082731.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878322 29879478 + protein_coding retained_intron MGP_LPJ_T0082732.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878325 29879035 + protein_coding retained_intron MGP_LPJ_T0082733.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878326 29880338 + protein_coding processed_transcript MGP_LPJ_T0082734.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878326 29882933 + MGP_LPJ_P0082734 protein_coding nonsense_mediated_decay MGP_LPJ_T0082735.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878332 29880156 + MGP_LPJ_P0082735 protein_coding protein_coding MGP_LPJ_T0082736.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878332 29880156 + MGP_LPJ_P0082736 protein_coding nonsense_mediated_decay MGP_LPJ_T0082737.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878332 29880156 + MGP_LPJ_P0082737 protein_coding protein_coding MGP_LPJ_T0082738.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878332 29880156 + MGP_LPJ_P0082738 protein_coding protein_coding MGP_LPJ_T0082739.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878334 29880336 + protein_coding processed_transcript MGP_LPJ_T0082740.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878334 29879525 + MGP_LPJ_P0082740 protein_coding protein_coding MGP_LPJ_T0082741.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878335 29882372 + protein_coding retained_intron MGP_LPJ_T0082742.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878336 29879453 + protein_coding retained_intron MGP_LPJ_T0082743.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878343 29880149 + protein_coding processed_transcript MGP_LPJ_T0082744.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878354 29880341 + protein_coding retained_intron MGP_LPJ_T0082745.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878369 29879332 + protein_coding retained_intron MGP_LPJ_T0082746.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878371 29880156 + MGP_LPJ_P0082746 protein_coding nonsense_mediated_decay MGP_LPJ_T0082747.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878373 29880156 + MGP_LPJ_P0082747 protein_coding nonsense_mediated_decay MGP_LPJ_T0082748.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878802 29879584 + protein_coding retained_intron MGP_LPJ_T0082749.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878847 29879255 + protein_coding processed_transcript MGP_LPJ_T0082750.1 MGP_LPJ_G0031931.1 mouse_genomes_project 7 29878855 29880156 + MGP_LPJ_P0082750 protein_coding protein_coding MGP_LPJ_T0015668.1 MGP_LPJ_G0013759.1 mouse_genomes_project 7 11755972 11756426 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002339.1 MGP_LPJ_G0002247.1 mouse_genomes_project 7 133752003 133752712 + TEC TEC MGP_LPJ_T0002342.1 MGP_LPJ_G0002250.1 mouse_genomes_project 7 134631235 134632225 - TEC TEC MGP_LPJ_T0082444.1 MGP_LPJ_G0031865.1 mouse_genomes_project 7 27996839 28002836 + Ech1 protein_coding retained_intron MGP_LPJ_T0082445.1 MGP_LPJ_G0031865.1 mouse_genomes_project 7 27996839 28004941 + MGP_LPJ_P0082445 Ech1 protein_coding protein_coding MGP_LPJ_T0082446.1 MGP_LPJ_G0031865.1 mouse_genomes_project 7 27996971 27998279 + Ech1 protein_coding retained_intron MGP_LPJ_T0082447.1 MGP_LPJ_G0031865.1 mouse_genomes_project 7 27997580 28003927 + Ech1 protein_coding processed_transcript MGP_LPJ_T0082448.1 MGP_LPJ_G0031865.1 mouse_genomes_project 7 27997826 28004941 + MGP_LPJ_P0082448 Ech1 protein_coding protein_coding MGP_LPJ_T0082449.1 MGP_LPJ_G0031865.1 mouse_genomes_project 7 28002844 28004941 + Ech1 protein_coding retained_intron MGP_LPJ_T0082450.1 MGP_LPJ_G0031865.1 mouse_genomes_project 7 28003944 28004941 + Ech1 protein_coding retained_intron MGP_LPJ_T0015755.1 MGP_LPJ_G0013846.1 mouse_genomes_project 7 49587748 49588400 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010948.1 MGP_LPJ_G0009066.1 mouse_genomes_project 7 136942684 136942752 + Mir7061 miRNA miRNA MGP_LPJ_T0085531.1 MGP_LPJ_G0032710.1 mouse_genomes_project 7 112496500 112519451 + MGP_LPJ_P0085531 Olfml1 protein_coding protein_coding MGP_LPJ_T0008824.1 MGP_LPJ_G0007128.1 mouse_genomes_project 7 18128672 18133441 + Gm26600 lincRNA lincRNA MGP_LPJ_T0083712.1 MGP_LPJ_G0032168.1 mouse_genomes_project 7 47253228 47297550 - MGP_LPJ_P0083712 Ush1c protein_coding protein_coding MGP_LPJ_T0083713.1 MGP_LPJ_G0032168.1 mouse_genomes_project 7 47253235 47297548 - MGP_LPJ_P0083713 Ush1c protein_coding nonsense_mediated_decay MGP_LPJ_T0083714.1 MGP_LPJ_G0032168.1 mouse_genomes_project 7 47253235 47297561 - MGP_LPJ_P0083714 Ush1c protein_coding protein_coding MGP_LPJ_T0083715.1 MGP_LPJ_G0032168.1 mouse_genomes_project 7 47253509 47297522 - MGP_LPJ_P0083715 Ush1c protein_coding protein_coding MGP_LPJ_T0083716.1 MGP_LPJ_G0032168.1 mouse_genomes_project 7 47253528 47297556 - MGP_LPJ_P0083716 Ush1c protein_coding protein_coding MGP_LPJ_T0083717.1 MGP_LPJ_G0032168.1 mouse_genomes_project 7 47253529 47289367 - MGP_LPJ_P0083717 Ush1c protein_coding protein_coding MGP_LPJ_T0083718.1 MGP_LPJ_G0032168.1 mouse_genomes_project 7 47253548 47259642 - Ush1c protein_coding retained_intron MGP_LPJ_T0083719.1 MGP_LPJ_G0032168.1 mouse_genomes_project 7 47258905 47278806 - Ush1c protein_coding processed_transcript MGP_LPJ_T0082172.1 MGP_LPJ_G0031792.1 mouse_genomes_project 7 25515243 25536464 - MGP_LPJ_P0082172 Cyp2b23 protein_coding protein_coding MGP_LPJ_T0005166.1 MGP_LPJ_G0004405.1 mouse_genomes_project 7 1141126 1152866 - D030047H15Rik antisense antisense MGP_LPJ_T0009055.1 MGP_LPJ_G0007288.1 mouse_genomes_project 7 135619808 135698798 + Gm44868 lincRNA lincRNA MGP_LPJ_T0009056.1 MGP_LPJ_G0007288.1 mouse_genomes_project 7 135619895 135623594 + Gm44868 lincRNA lincRNA MGP_LPJ_T0085514.1 MGP_LPJ_G0032698.1 mouse_genomes_project 7 111918280 111919231 - MGP_LPJ_P0085514 Olfr6 protein_coding protein_coding MGP_LPJ_T0082936.1 MGP_LPJ_G0031966.1 mouse_genomes_project 7 30692030 30693333 - MGP_LPJ_P0082936 Scgb1b2 protein_coding protein_coding MGP_LPJ_T0083137.1 MGP_LPJ_G0032008.1 mouse_genomes_project 7 40941287 40974466 + MGP_LPJ_P0083137 Vstm2b protein_coding protein_coding MGP_LPJ_T0083138.1 MGP_LPJ_G0032008.1 mouse_genomes_project 7 40942186 40973840 + MGP_LPJ_P0083138 Vstm2b protein_coding protein_coding MGP_LPJ_T0083139.1 MGP_LPJ_G0032008.1 mouse_genomes_project 7 40942240 40945690 + MGP_LPJ_P0083139 Vstm2b protein_coding protein_coding MGP_LPJ_T0083140.1 MGP_LPJ_G0032008.1 mouse_genomes_project 7 40943034 40945703 + MGP_LPJ_P0083140 Vstm2b protein_coding protein_coding MGP_LPJ_T0002287.1 MGP_LPJ_G0002195.1 mouse_genomes_project 7 78468070 78471479 + TEC TEC MGP_LPJ_T0015677.1 MGP_LPJ_G0013768.1 mouse_genomes_project 7 15164536 15165215 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015699.1 MGP_LPJ_G0013790.1 mouse_genomes_project 7 24764198 24764367 + processed_pseudogene processed_pseudogene MGP_LPJ_T0085248.1 MGP_LPJ_G0032554.1 mouse_genomes_project 7 107578866 107579820 - MGP_LPJ_P0085248 Olfr589 protein_coding protein_coding MGP_LPJ_T0081735.1 MGP_LPJ_G0031671.1 mouse_genomes_project 7 17586530 17589952 - MGP_LPJ_P0081735 Ppm1n protein_coding protein_coding MGP_LPJ_T0081736.1 MGP_LPJ_G0031671.1 mouse_genomes_project 7 17586567 17588285 - Ppm1n protein_coding retained_intron MGP_LPJ_T0081737.1 MGP_LPJ_G0031671.1 mouse_genomes_project 7 17587704 17588039 - Ppm1n protein_coding retained_intron MGP_LPJ_T0081738.1 MGP_LPJ_G0031671.1 mouse_genomes_project 7 17588704 17589489 - Ppm1n protein_coding retained_intron MGP_LPJ_T0100978.1 MGP_LPJ_G0039241.1 mouse_genomes_project 7 101548643 101548752 + Gm24412 snoRNA snoRNA MGP_LPJ_T0085967.1 MGP_LPJ_G0032839.1 mouse_genomes_project 7 125313404 125493972 - MGP_LPJ_P0085967 Dnah3 protein_coding protein_coding MGP_LPJ_T0085968.1 MGP_LPJ_G0032839.1 mouse_genomes_project 7 125313404 125493972 - MGP_LPJ_P0085968 Dnah3 protein_coding unknown_likely_coding MGP_LPJ_T0083090.1 MGP_LPJ_G0031997.1 mouse_genomes_project 7 35525026 35557648 - MGP_LPJ_P0083090 Zfp507 protein_coding protein_coding MGP_LPJ_T0083091.1 MGP_LPJ_G0031997.1 mouse_genomes_project 7 35526406 35548669 - MGP_LPJ_P0083091 Zfp507 protein_coding protein_coding MGP_LPJ_T0083092.1 MGP_LPJ_G0031997.1 mouse_genomes_project 7 35528653 35557626 - MGP_LPJ_P0083092 Zfp507 protein_coding protein_coding MGP_LPJ_T0083093.1 MGP_LPJ_G0031997.1 mouse_genomes_project 7 35533614 35533783 - Zfp507 protein_coding processed_transcript MGP_LPJ_T0083094.1 MGP_LPJ_G0031997.1 mouse_genomes_project 7 35546346 35557645 - MGP_LPJ_P0083094 Zfp507 protein_coding protein_coding MGP_LPJ_T0083095.1 MGP_LPJ_G0031997.1 mouse_genomes_project 7 35555667 35557613 - Zfp507 protein_coding retained_intron MGP_LPJ_T0083096.1 MGP_LPJ_G0031997.1 mouse_genomes_project 7 35556674 35557662 - Zfp507 protein_coding retained_intron MGP_LPJ_T0102320.1 MGP_LPJ_G0040357.1 mouse_genomes_project 7 11965985 11969240 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0009053.1 MGP_LPJ_G0007286.1 mouse_genomes_project 7 134707766 134849379 + Gm44671 lincRNA lincRNA MGP_LPJ_T0099745.1 MGP_LPJ_G0038008.1 mouse_genomes_project 7 136009068 136009178 + Gm23847 snRNA snRNA MGP_LPJ_T0015685.1 MGP_LPJ_G0013776.1 mouse_genomes_project 7 22686912 22687221 + processed_pseudogene processed_pseudogene MGP_LPJ_T0081300.1 MGP_LPJ_G0031511.1 mouse_genomes_project 7 3678559 3679571 + MGP_LPJ_P0081300 Olfr1346 protein_coding protein_coding MGP_LPJ_T0098674.1 MGP_LPJ_G0036943.1 mouse_genomes_project 7 135628686 135655520 + Gm33248 sense_intronic sense_intronic MGP_LPJ_T0081742.1 MGP_LPJ_G0031674.1 mouse_genomes_project 7 17662824 17673973 + MGP_LPJ_P0081742 Ercc1 protein_coding protein_coding MGP_LPJ_T0081743.1 MGP_LPJ_G0031674.1 mouse_genomes_project 7 17663137 17673208 + Ercc1 protein_coding retained_intron MGP_LPJ_T0081744.1 MGP_LPJ_G0031674.1 mouse_genomes_project 7 17663143 17668632 + Ercc1 protein_coding retained_intron MGP_LPJ_T0081745.1 MGP_LPJ_G0031674.1 mouse_genomes_project 7 17663185 17672578 + MGP_LPJ_P0081745 Ercc1 protein_coding protein_coding MGP_LPJ_T0081746.1 MGP_LPJ_G0031674.1 mouse_genomes_project 7 17663196 17668279 + MGP_LPJ_P0081746 Ercc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0081747.1 MGP_LPJ_G0031674.1 mouse_genomes_project 7 17666557 17670587 + MGP_LPJ_P0081747 Ercc1 protein_coding protein_coding MGP_LPJ_T0081748.1 MGP_LPJ_G0031674.1 mouse_genomes_project 7 17667568 17672064 + Ercc1 protein_coding processed_transcript MGP_LPJ_T0081749.1 MGP_LPJ_G0031674.1 mouse_genomes_project 7 17670049 17672915 + Ercc1 protein_coding retained_intron MGP_LPJ_T0081750.1 MGP_LPJ_G0031674.1 mouse_genomes_project 7 17670514 17673971 + MGP_LPJ_P0081750 Ercc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0081751.1 MGP_LPJ_G0031674.1 mouse_genomes_project 7 17672084 17673972 + Ercc1 protein_coding retained_intron MGP_LPJ_T0083591.1 MGP_LPJ_G0032135.1 mouse_genomes_project 7 46498130 46498984 - Ppp1r15a protein_coding processed_transcript MGP_LPJ_T0083592.1 MGP_LPJ_G0032135.1 mouse_genomes_project 7 46498131 46501255 - MGP_LPJ_P0083592 Ppp1r15a protein_coding protein_coding MGP_LPJ_T0083593.1 MGP_LPJ_G0032135.1 mouse_genomes_project 7 46498136 46501133 - Ppp1r15a protein_coding retained_intron MGP_LPJ_T0015700.1 MGP_LPJ_G0013791.1 mouse_genomes_project 7 25061060 25062358 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102389.1 MGP_LPJ_G0040425.1 mouse_genomes_project 7 48663847 48664690 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0082706.1 MGP_LPJ_G0031928.1 mouse_genomes_project 7 29867136 29870387 + Hspb6 protein_coding processed_transcript MGP_LPJ_T0082707.1 MGP_LPJ_G0031928.1 mouse_genomes_project 7 29867482 29870386 + Hspb6 protein_coding processed_transcript MGP_LPJ_T0082708.1 MGP_LPJ_G0031928.1 mouse_genomes_project 7 29868226 29870390 + MGP_LPJ_P0082708 Hspb6 protein_coding protein_coding MGP_LPJ_T0082709.1 MGP_LPJ_G0031928.1 mouse_genomes_project 7 29868832 29869591 + Hspb6 protein_coding processed_transcript MGP_LPJ_T0085874.1 MGP_LPJ_G0032816.1 mouse_genomes_project 7 123814066 123838792 - MGP_LPJ_P0085874 Coq7 protein_coding protein_coding MGP_LPJ_T0085875.1 MGP_LPJ_G0032816.1 mouse_genomes_project 7 123830508 123838847 - MGP_LPJ_P0085875 Coq7 protein_coding protein_coding MGP_LPJ_T0085876.1 MGP_LPJ_G0032816.1 mouse_genomes_project 7 123832255 123838805 - Coq7 protein_coding retained_intron MGP_LPJ_T0010856.1 MGP_LPJ_G0008974.1 mouse_genomes_project 7 4529424 4529480 + Mir5620 miRNA miRNA MGP_LPJ_T0086682.1 MGP_LPJ_G0032977.1 mouse_genomes_project 7 133740524 133745397 - MGP_LPJ_P0086682 Prss53 protein_coding protein_coding MGP_LPJ_T0086684.1 MGP_LPJ_G0032977.1 mouse_genomes_project 7 133740693 133745731 - MGP_LPJ_P0086684 Prss53 protein_coding unknown_likely_coding MGP_LPJ_T0081490.1 MGP_LPJ_G0031597.1 mouse_genomes_project 7 13892992 13922961 - MGP_LPJ_P0081490 Gltscr1 protein_coding protein_coding MGP_LPJ_T0083249.1 MGP_LPJ_G0032045.1 mouse_genomes_project 7 44561130 44566023 + MGP_LPJ_P0083249 Klk9 protein_coding protein_coding MGP_LPJ_T0082251.1 MGP_LPJ_G0031812.1 mouse_genomes_project 7 26324133 26328946 - MGP_LPJ_P0082251 Gm20479 protein_coding nonsense_mediated_decay MGP_LPJ_T0082520.1 MGP_LPJ_G0031884.1 mouse_genomes_project 7 28527623 28541114 + MGP_LPJ_P0082520 Dpf1 protein_coding protein_coding MGP_LPJ_T0082521.1 MGP_LPJ_G0031884.1 mouse_genomes_project 7 28527648 28541438 + MGP_LPJ_P0082521 Dpf1 protein_coding protein_coding MGP_LPJ_T0082522.1 MGP_LPJ_G0031884.1 mouse_genomes_project 7 28531625 28540746 + MGP_LPJ_P0082522 Dpf1 protein_coding protein_coding MGP_LPJ_T0082523.1 MGP_LPJ_G0031884.1 mouse_genomes_project 7 28531713 28540738 + Dpf1 protein_coding retained_intron MGP_LPJ_T0082524.1 MGP_LPJ_G0031884.1 mouse_genomes_project 7 28531713 28540753 + MGP_LPJ_P0082524 Dpf1 protein_coding protein_coding MGP_LPJ_T0082525.1 MGP_LPJ_G0031884.1 mouse_genomes_project 7 28531719 28541434 + Dpf1 protein_coding processed_transcript MGP_LPJ_T0082526.1 MGP_LPJ_G0031884.1 mouse_genomes_project 7 28533214 28536990 + MGP_LPJ_P0082526 Dpf1 protein_coding protein_coding MGP_LPJ_T0082527.1 MGP_LPJ_G0031884.1 mouse_genomes_project 7 28533307 28535399 + Dpf1 protein_coding processed_transcript MGP_LPJ_T0082528.1 MGP_LPJ_G0031884.1 mouse_genomes_project 7 28536709 28539587 + MGP_LPJ_P0082528 Dpf1 protein_coding protein_coding MGP_LPJ_T0082529.1 MGP_LPJ_G0031884.1 mouse_genomes_project 7 28537992 28540413 + Dpf1 protein_coding retained_intron MGP_LPJ_T0085827.1 MGP_LPJ_G0032807.1 mouse_genomes_project 7 121553489 121557316 - MGP_LPJ_P0085827 Rps13 protein_coding unknown_likely_coding MGP_LPJ_T0085828.1 MGP_LPJ_G0032807.1 mouse_genomes_project 7 121553492 121557404 - MGP_LPJ_P0085828 Rps13 protein_coding protein_coding MGP_LPJ_T0085829.1 MGP_LPJ_G0032807.1 mouse_genomes_project 7 121553497 121557342 - MGP_LPJ_P0085829 Rps13 protein_coding protein_coding MGP_LPJ_T0085830.1 MGP_LPJ_G0032807.1 mouse_genomes_project 7 121553498 121556393 - Rps13 protein_coding retained_intron MGP_LPJ_T0085831.1 MGP_LPJ_G0032807.1 mouse_genomes_project 7 121553499 121557339 - Rps13 protein_coding retained_intron MGP_LPJ_T0085832.1 MGP_LPJ_G0032807.1 mouse_genomes_project 7 121553499 121557344 - Rps13 protein_coding retained_intron MGP_LPJ_T0085833.1 MGP_LPJ_G0032807.1 mouse_genomes_project 7 121553499 121557375 - MGP_LPJ_P0085833 Rps13 protein_coding nonsense_mediated_decay MGP_LPJ_T0085834.1 MGP_LPJ_G0032807.1 mouse_genomes_project 7 121554038 121557326 - Rps13 protein_coding retained_intron MGP_LPJ_T0085835.1 MGP_LPJ_G0032807.1 mouse_genomes_project 7 121556250 121557331 - Rps13 protein_coding retained_intron MGP_LPJ_T0085791.1 MGP_LPJ_G0032804.1 mouse_genomes_project 7 120676874 121242315 - MGP_LPJ_P0085791 Sox6 protein_coding protein_coding MGP_LPJ_T0085792.1 MGP_LPJ_G0032804.1 mouse_genomes_project 7 120677346 121249925 - MGP_LPJ_P0085792 Sox6 protein_coding protein_coding MGP_LPJ_T0085793.1 MGP_LPJ_G0032804.1 mouse_genomes_project 7 120677346 121202821 - MGP_LPJ_P0085793 Sox6 protein_coding protein_coding MGP_LPJ_T0085794.1 MGP_LPJ_G0032804.1 mouse_genomes_project 7 120677346 121242315 - MGP_LPJ_P0085794 Sox6 protein_coding protein_coding MGP_LPJ_T0085795.1 MGP_LPJ_G0032804.1 mouse_genomes_project 7 120680456 121024507 - MGP_LPJ_P0085795 Sox6 protein_coding protein_coding MGP_LPJ_T0085796.1 MGP_LPJ_G0032804.1 mouse_genomes_project 7 120682659 121047568 - MGP_LPJ_P0085796 Sox6 protein_coding protein_coding MGP_LPJ_T0085797.1 MGP_LPJ_G0032804.1 mouse_genomes_project 7 120682659 121047603 - MGP_LPJ_P0085797 Sox6 protein_coding protein_coding MGP_LPJ_T0085798.1 MGP_LPJ_G0032804.1 mouse_genomes_project 7 120682672 121202821 - MGP_LPJ_P0085798 Sox6 protein_coding protein_coding MGP_LPJ_T0085799.1 MGP_LPJ_G0032804.1 mouse_genomes_project 7 120722470 121244783 - Sox6 protein_coding retained_intron MGP_LPJ_T0085800.1 MGP_LPJ_G0032804.1 mouse_genomes_project 7 120722904 120803850 - Sox6 protein_coding processed_transcript MGP_LPJ_T0085801.1 MGP_LPJ_G0032804.1 mouse_genomes_project 7 120748417 121249977 - Sox6 protein_coding retained_intron MGP_LPJ_T0085802.1 MGP_LPJ_G0032804.1 mouse_genomes_project 7 120793473 120870510 - MGP_LPJ_P0085802 Sox6 protein_coding protein_coding MGP_LPJ_T0085803.1 MGP_LPJ_G0032804.1 mouse_genomes_project 7 120803182 120870510 - Sox6 protein_coding retained_intron MGP_LPJ_T0085804.1 MGP_LPJ_G0032804.1 mouse_genomes_project 7 120982451 121061099 - MGP_LPJ_P0085804 Sox6 protein_coding protein_coding MGP_LPJ_T0085805.1 MGP_LPJ_G0032804.1 mouse_genomes_project 7 121008468 121245694 - Sox6 protein_coding processed_transcript MGP_LPJ_T0085806.1 MGP_LPJ_G0032804.1 mouse_genomes_project 7 121045635 121047614 - Sox6 protein_coding retained_intron MGP_LPJ_T0084312.1 MGP_LPJ_G0032298.1 mouse_genomes_project 7 82857434 82875055 - MGP_LPJ_P0084312 Kif7 protein_coding protein_coding MGP_LPJ_T0084313.1 MGP_LPJ_G0032298.1 mouse_genomes_project 7 82857435 82873521 - MGP_LPJ_P0084313 Kif7 protein_coding protein_coding MGP_LPJ_T0084314.1 MGP_LPJ_G0032298.1 mouse_genomes_project 7 82857435 82873521 - MGP_LPJ_P0084314 Kif7 protein_coding protein_coding MGP_LPJ_T0084315.1 MGP_LPJ_G0032298.1 mouse_genomes_project 7 82857862 82875004 - MGP_LPJ_P0084315 Kif7 protein_coding protein_coding MGP_LPJ_T0081491.1 MGP_LPJ_G0031598.1 mouse_genomes_project 7 13998428 14022832 + MGP_LPJ_P0081491 Zfp541 protein_coding protein_coding MGP_LPJ_T0101618.1 MGP_LPJ_G0039691.1 mouse_genomes_project 7 132441904 132445433 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0081666.1 MGP_LPJ_G0031652.1 mouse_genomes_project 7 17205415 17241135 + MGP_LPJ_P0081666 protein_coding protein_coding MGP_LPJ_T0015783.1 MGP_LPJ_G0013874.1 mouse_genomes_project 7 75454856 75455844 - processed_pseudogene processed_pseudogene MGP_LPJ_T0083798.1 MGP_LPJ_G0032193.1 mouse_genomes_project 7 49457413 49458468 - MGP_LPJ_P0083798 Mrgprx1 protein_coding protein_coding MGP_LPJ_T0008811.1 MGP_LPJ_G0007117.1 mouse_genomes_project 7 517590 536357 - Gm44920 lincRNA lincRNA MGP_LPJ_T0086048.1 MGP_LPJ_G0032865.1 mouse_genomes_project 7 127548414 127577650 - Ears2 protein_coding retained_intron MGP_LPJ_T0086049.1 MGP_LPJ_G0032865.1 mouse_genomes_project 7 127550018 127577709 - Ears2 protein_coding retained_intron MGP_LPJ_T0086050.1 MGP_LPJ_G0032865.1 mouse_genomes_project 7 127550018 127577902 - MGP_LPJ_P0086050 Ears2 protein_coding protein_coding MGP_LPJ_T0087259.1 MGP_LPJ_G0033128.1 mouse_genomes_project 7 147783484 147818681 + MGP_LPJ_P0087259 Ptdss2 protein_coding nonsense_mediated_decay MGP_LPJ_T0087260.1 MGP_LPJ_G0033128.1 mouse_genomes_project 7 147794249 147817216 + MGP_LPJ_P0087260 Ptdss2 protein_coding protein_coding MGP_LPJ_T0087261.1 MGP_LPJ_G0033128.1 mouse_genomes_project 7 147794271 147817048 + MGP_LPJ_P0087261 Ptdss2 protein_coding nonsense_mediated_decay MGP_LPJ_T0087262.1 MGP_LPJ_G0033128.1 mouse_genomes_project 7 147795279 147821246 + MGP_LPJ_P0087262 Ptdss2 protein_coding protein_coding MGP_LPJ_T0087263.1 MGP_LPJ_G0033128.1 mouse_genomes_project 7 147795294 147818548 + Ptdss2 protein_coding retained_intron MGP_LPJ_T0087264.1 MGP_LPJ_G0033128.1 mouse_genomes_project 7 147795337 147807631 + Ptdss2 protein_coding processed_transcript MGP_LPJ_T0087265.1 MGP_LPJ_G0033128.1 mouse_genomes_project 7 147795349 147807131 + MGP_LPJ_P0087265 Ptdss2 protein_coding nonsense_mediated_decay MGP_LPJ_T0087266.1 MGP_LPJ_G0033128.1 mouse_genomes_project 7 147796431 147811101 + MGP_LPJ_P0087266 Ptdss2 protein_coding nonsense_mediated_decay MGP_LPJ_T0087267.1 MGP_LPJ_G0033128.1 mouse_genomes_project 7 147796546 147807660 + Ptdss2 protein_coding processed_transcript MGP_LPJ_T0005167.1 MGP_LPJ_G0004406.1 mouse_genomes_project 7 1458699 1478863 - Gm15494 antisense antisense MGP_LPJ_T0005168.1 MGP_LPJ_G0004406.1 mouse_genomes_project 7 1459465 1478899 - Gm15494 antisense antisense MGP_LPJ_T0099708.1 MGP_LPJ_G0037971.1 mouse_genomes_project 7 53798105 53798261 - Gm22211 snRNA snRNA MGP_LPJ_T0102379.1 MGP_LPJ_G0040415.1 mouse_genomes_project 7 44855004 44855155 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0082473.1 MGP_LPJ_G0031872.1 mouse_genomes_project 7 28191897 28227196 - MGP_LPJ_P0082473 Ryr1 protein_coding unknown_likely_coding MGP_LPJ_T0082474.1 MGP_LPJ_G0031872.1 mouse_genomes_project 7 28191898 28321583 - MGP_LPJ_P0082474 Ryr1 protein_coding protein_coding MGP_LPJ_T0082475.1 MGP_LPJ_G0031872.1 mouse_genomes_project 7 28191902 28321583 - MGP_LPJ_P0082475 Ryr1 protein_coding protein_coding MGP_LPJ_T0082476.1 MGP_LPJ_G0031872.1 mouse_genomes_project 7 28227696 28321447 - MGP_LPJ_P0082476 Ryr1 protein_coding unknown_likely_coding MGP_LPJ_T0084831.1 MGP_LPJ_G0032439.1 mouse_genomes_project 7 101819663 101891093 + Pak1 protein_coding retained_intron MGP_LPJ_T0084832.1 MGP_LPJ_G0032439.1 mouse_genomes_project 7 101819663 101955858 + MGP_LPJ_P0084832 Pak1 protein_coding protein_coding MGP_LPJ_T0084833.1 MGP_LPJ_G0032439.1 mouse_genomes_project 7 101862487 101902947 + MGP_LPJ_P0084833 Pak1 protein_coding protein_coding MGP_LPJ_T0084834.1 MGP_LPJ_G0032439.1 mouse_genomes_project 7 101874698 101956356 + MGP_LPJ_P0084834 Pak1 protein_coding nonsense_mediated_decay MGP_LPJ_T0084835.1 MGP_LPJ_G0032439.1 mouse_genomes_project 7 101874698 101956356 + MGP_LPJ_P0084835 Pak1 protein_coding protein_coding MGP_LPJ_T0084836.1 MGP_LPJ_G0032439.1 mouse_genomes_project 7 101939338 101955257 + Pak1 protein_coding retained_intron MGP_LPJ_T0084339.1 MGP_LPJ_G0032307.1 mouse_genomes_project 7 83209878 83271325 + MGP_LPJ_P0084339 Zfp710 protein_coding protein_coding MGP_LPJ_T0084340.1 MGP_LPJ_G0032307.1 mouse_genomes_project 7 83211658 83264219 + MGP_LPJ_P0084340 Zfp710 protein_coding protein_coding MGP_LPJ_T0084341.1 MGP_LPJ_G0032307.1 mouse_genomes_project 7 83264126 83275044 + MGP_LPJ_P0084341 Zfp710 protein_coding protein_coding MGP_LPJ_T0082407.1 MGP_LPJ_G0031857.1 mouse_genomes_project 7 27871217 27896114 + MGP_LPJ_P0082407 Fbxo17 protein_coding protein_coding MGP_LPJ_T0082408.1 MGP_LPJ_G0031857.1 mouse_genomes_project 7 27871245 27896108 + MGP_LPJ_P0082408 Fbxo17 protein_coding protein_coding MGP_LPJ_T0082409.1 MGP_LPJ_G0031857.1 mouse_genomes_project 7 27871269 27882003 + Fbxo17 protein_coding retained_intron MGP_LPJ_T0082410.1 MGP_LPJ_G0031857.1 mouse_genomes_project 7 27871286 27896114 + MGP_LPJ_P0082410 Fbxo17 protein_coding protein_coding MGP_LPJ_T0082411.1 MGP_LPJ_G0031857.1 mouse_genomes_project 7 27889123 27895452 + MGP_LPJ_P0082411 Fbxo17 protein_coding protein_coding MGP_LPJ_T0083809.1 MGP_LPJ_G0032201.1 mouse_genomes_project 7 50354236 50368053 + Zdhhc13 protein_coding processed_transcript MGP_LPJ_T0083810.1 MGP_LPJ_G0032201.1 mouse_genomes_project 7 50354315 50393687 + MGP_LPJ_P0083810 Zdhhc13 protein_coding protein_coding MGP_LPJ_T0102302.1 MGP_LPJ_G0040339.1 mouse_genomes_project 7 9303627 9304592 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0102326.1 MGP_LPJ_G0040363.1 mouse_genomes_project 7 12282978 12283989 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0085033.1 MGP_LPJ_G0032489.1 mouse_genomes_project 7 105385140 105567500 + MGP_LPJ_P0085033 Fchsd2 protein_coding protein_coding MGP_LPJ_T0085034.1 MGP_LPJ_G0032489.1 mouse_genomes_project 7 105385141 105480830 + Fchsd2 protein_coding processed_transcript MGP_LPJ_T0085035.1 MGP_LPJ_G0032489.1 mouse_genomes_project 7 105385146 105567523 + MGP_LPJ_P0085035 Fchsd2 protein_coding protein_coding MGP_LPJ_T0085036.1 MGP_LPJ_G0032489.1 mouse_genomes_project 7 105385170 105477863 + Fchsd2 protein_coding retained_intron MGP_LPJ_T0085037.1 MGP_LPJ_G0032489.1 mouse_genomes_project 7 105385245 105468673 + Fchsd2 protein_coding processed_transcript MGP_LPJ_T0085038.1 MGP_LPJ_G0032489.1 mouse_genomes_project 7 105385247 105416298 + Fchsd2 protein_coding retained_intron MGP_LPJ_T0085039.1 MGP_LPJ_G0032489.1 mouse_genomes_project 7 105522861 105532344 + Fchsd2 protein_coding retained_intron MGP_LPJ_T0009044.1 MGP_LPJ_G0007279.1 mouse_genomes_project 7 132853788 132857401 + Gm44939 lincRNA lincRNA MGP_LPJ_T0010956.1 MGP_LPJ_G0009074.1 mouse_genomes_project 7 148687713 148687776 + Mir3104 miRNA miRNA MGP_LPJ_T0080941.1 MGP_LPJ_G0031419.1 mouse_genomes_project 7 98991 133605 - MGP_LPJ_P0080941 Nlrp12 protein_coding protein_coding MGP_LPJ_T0080942.1 MGP_LPJ_G0031419.1 mouse_genomes_project 7 123426 133732 - Nlrp12 protein_coding retained_intron MGP_LPJ_T0015756.1 MGP_LPJ_G0013847.1 mouse_genomes_project 7 49757577 49758082 - processed_pseudogene processed_pseudogene MGP_LPJ_T0085084.1 MGP_LPJ_G0032494.1 mouse_genomes_project 7 105984132 106044634 + Clpb protein_coding retained_intron MGP_LPJ_T0085085.1 MGP_LPJ_G0032494.1 mouse_genomes_project 7 105984132 106112888 + MGP_LPJ_P0085085 Clpb protein_coding protein_coding MGP_LPJ_T0085086.1 MGP_LPJ_G0032494.1 mouse_genomes_project 7 105984204 106110533 + MGP_LPJ_P0085086 Clpb protein_coding protein_coding MGP_LPJ_T0085087.1 MGP_LPJ_G0032494.1 mouse_genomes_project 7 105984256 106010664 + Clpb protein_coding retained_intron MGP_LPJ_T0085088.1 MGP_LPJ_G0032494.1 mouse_genomes_project 7 105984274 106028251 + MGP_LPJ_P0085088 Clpb protein_coding nonsense_mediated_decay MGP_LPJ_T0085089.1 MGP_LPJ_G0032494.1 mouse_genomes_project 7 105984275 106109613 + Clpb protein_coding retained_intron MGP_LPJ_T0085090.1 MGP_LPJ_G0032494.1 mouse_genomes_project 7 106003820 106086445 + MGP_LPJ_P0085090 Clpb protein_coding protein_coding MGP_LPJ_T0085091.1 MGP_LPJ_G0032494.1 mouse_genomes_project 7 106004910 106073637 + MGP_LPJ_P0085091 Clpb protein_coding protein_coding MGP_LPJ_T0085092.1 MGP_LPJ_G0032494.1 mouse_genomes_project 7 106086328 106092115 + Clpb protein_coding processed_transcript MGP_LPJ_T0085093.1 MGP_LPJ_G0032494.1 mouse_genomes_project 7 106086355 106108358 + Clpb protein_coding processed_transcript MGP_LPJ_T0083020.1 MGP_LPJ_G0031985.1 mouse_genomes_project 7 34893914 34896851 - Lrp3 protein_coding processed_transcript MGP_LPJ_T0083021.1 MGP_LPJ_G0031985.1 mouse_genomes_project 7 34894765 34897117 - Lrp3 protein_coding retained_intron MGP_LPJ_T0083022.1 MGP_LPJ_G0031985.1 mouse_genomes_project 7 34894765 34910551 - MGP_LPJ_P0083022 Lrp3 protein_coding protein_coding MGP_LPJ_T0083023.1 MGP_LPJ_G0031985.1 mouse_genomes_project 7 34894766 34910345 - MGP_LPJ_P0083023 Lrp3 protein_coding protein_coding MGP_LPJ_T0010917.1 MGP_LPJ_G0009035.1 mouse_genomes_project 7 66563600 66563706 + Mir211 miRNA miRNA MGP_LPJ_T0010906.1 MGP_LPJ_G0009024.1 mouse_genomes_project 7 63982198 63982264 - Mir344e miRNA miRNA MGP_LPJ_T0086253.1 MGP_LPJ_G0032901.1 mouse_genomes_project 7 132237513 132249242 - MGP_LPJ_P0086253 Atxn2l protein_coding protein_coding MGP_LPJ_T0086254.1 MGP_LPJ_G0032901.1 mouse_genomes_project 7 132237520 132248219 - MGP_LPJ_P0086254 Atxn2l protein_coding protein_coding MGP_LPJ_T0086255.1 MGP_LPJ_G0032901.1 mouse_genomes_project 7 132237591 132249160 - MGP_LPJ_P0086255 Atxn2l protein_coding protein_coding MGP_LPJ_T0086256.1 MGP_LPJ_G0032901.1 mouse_genomes_project 7 132237957 132239181 - MGP_LPJ_P0086256 Atxn2l protein_coding protein_coding MGP_LPJ_T0086257.1 MGP_LPJ_G0032901.1 mouse_genomes_project 7 132238767 132248123 - MGP_LPJ_P0086257 Atxn2l protein_coding protein_coding MGP_LPJ_T0086258.1 MGP_LPJ_G0032901.1 mouse_genomes_project 7 132244954 132247905 - MGP_LPJ_P0086258 Atxn2l protein_coding protein_coding MGP_LPJ_T0015648.1 MGP_LPJ_G0013739.1 mouse_genomes_project 7 1672723 1673449 + processed_pseudogene processed_pseudogene MGP_LPJ_T0086147.1 MGP_LPJ_G0032882.1 mouse_genomes_project 7 129584871 130029517 + MGP_LPJ_P0086147 Hs3st4 protein_coding protein_coding MGP_LPJ_T0083745.1 MGP_LPJ_G0032175.1 mouse_genomes_project 7 47798492 47802163 - MGP_LPJ_P0083745 Saa3 protein_coding protein_coding MGP_LPJ_T0081285.1 MGP_LPJ_G0031504.1 mouse_genomes_project 7 3497837 3516766 - MGP_LPJ_P0081285 Zfp583 protein_coding protein_coding MGP_LPJ_T0081286.1 MGP_LPJ_G0031504.1 mouse_genomes_project 7 3498453 3515915 - MGP_LPJ_P0081286 Zfp583 protein_coding protein_coding MGP_LPJ_T0081287.1 MGP_LPJ_G0031504.1 mouse_genomes_project 7 3498482 3514744 - MGP_LPJ_P0081287 Zfp583 protein_coding protein_coding MGP_LPJ_T0081288.1 MGP_LPJ_G0031504.1 mouse_genomes_project 7 3499806 3516731 - Zfp583 protein_coding processed_transcript MGP_LPJ_T0081289.1 MGP_LPJ_G0031504.1 mouse_genomes_project 7 3508674 3516685 - Zfp583 protein_coding processed_transcript MGP_LPJ_T0081290.1 MGP_LPJ_G0031504.1 mouse_genomes_project 7 3509128 3516759 - MGP_LPJ_P0081290 Zfp583 protein_coding protein_coding MGP_LPJ_T0015884.1 MGP_LPJ_G0013975.1 mouse_genomes_project 7 142368486 142369472 + processed_pseudogene processed_pseudogene MGP_LPJ_T0084467.1 MGP_LPJ_G0032325.1 mouse_genomes_project 7 84110540 84124495 + MGP_LPJ_P0084467 Zscan2 protein_coding protein_coding MGP_LPJ_T0084468.1 MGP_LPJ_G0032325.1 mouse_genomes_project 7 84110571 84113057 + MGP_LPJ_P0084468 Zscan2 protein_coding protein_coding MGP_LPJ_T0084469.1 MGP_LPJ_G0032325.1 mouse_genomes_project 7 84110573 84125414 + MGP_LPJ_P0084469 Zscan2 protein_coding protein_coding MGP_LPJ_T0084470.1 MGP_LPJ_G0032325.1 mouse_genomes_project 7 84111728 84126076 + MGP_LPJ_P0084470 Zscan2 protein_coding protein_coding MGP_LPJ_T0084471.1 MGP_LPJ_G0032325.1 mouse_genomes_project 7 84112502 84124624 + MGP_LPJ_P0084471 Zscan2 protein_coding protein_coding MGP_LPJ_T0082266.1 MGP_LPJ_G0031816.1 mouse_genomes_project 7 26476440 26479839 + MGP_LPJ_P0082266 Sertad1 protein_coding protein_coding MGP_LPJ_T0082267.1 MGP_LPJ_G0031816.1 mouse_genomes_project 7 26476905 26479029 + MGP_LPJ_P0082267 Sertad1 protein_coding protein_coding MGP_LPJ_T0015736.1 MGP_LPJ_G0013827.1 mouse_genomes_project 7 41954920 41955570 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010881.1 MGP_LPJ_G0008999.1 mouse_genomes_project 7 34768389 34768459 + Gm25033 miRNA miRNA MGP_LPJ_T0008877.1 MGP_LPJ_G0007171.1 mouse_genomes_project 7 44264572 44269730 - Gm2511 lincRNA lincRNA MGP_LPJ_T0008878.1 MGP_LPJ_G0007171.1 mouse_genomes_project 7 44264575 44272384 - Gm2511 lincRNA lincRNA MGP_LPJ_T0008879.1 MGP_LPJ_G0007171.1 mouse_genomes_project 7 44268987 44271968 - Gm2511 lincRNA lincRNA MGP_LPJ_T0084143.1 MGP_LPJ_G0032268.1 mouse_genomes_project 7 70459105 70737928 + MGP_LPJ_P0084143 Igf1r protein_coding protein_coding MGP_LPJ_T0085219.1 MGP_LPJ_G0032527.1 mouse_genomes_project 7 107015752 107016706 + MGP_LPJ_P0085219 Olfr554 protein_coding protein_coding MGP_LPJ_T0085276.1 MGP_LPJ_G0032579.1 mouse_genomes_project 7 108114528 108115470 - MGP_LPJ_P0085276 Olfr620 protein_coding protein_coding MGP_LPJ_T0085363.1 MGP_LPJ_G0032635.1 mouse_genomes_project 7 109115701 109120781 - MGP_LPJ_P0085363 protein_coding protein_coding MGP_LPJ_T0082431.1 MGP_LPJ_G0031864.1 mouse_genomes_project 7 27980240 27993934 + MGP_LPJ_P0082431 Hnrnpl protein_coding protein_coding MGP_LPJ_T0082432.1 MGP_LPJ_G0031864.1 mouse_genomes_project 7 27980505 27988652 + Hnrnpl protein_coding retained_intron MGP_LPJ_T0082433.1 MGP_LPJ_G0031864.1 mouse_genomes_project 7 27980507 27993917 + MGP_LPJ_P0082433 Hnrnpl protein_coding protein_coding MGP_LPJ_T0082434.1 MGP_LPJ_G0031864.1 mouse_genomes_project 7 27981217 27986817 + MGP_LPJ_P0082434 Hnrnpl protein_coding protein_coding MGP_LPJ_T0082435.1 MGP_LPJ_G0031864.1 mouse_genomes_project 7 27982582 27993934 + MGP_LPJ_P0082435 Hnrnpl protein_coding protein_coding MGP_LPJ_T0082436.1 MGP_LPJ_G0031864.1 mouse_genomes_project 7 27982629 27993908 + MGP_LPJ_P0082436 Hnrnpl protein_coding protein_coding MGP_LPJ_T0082437.1 MGP_LPJ_G0031864.1 mouse_genomes_project 7 27982632 27988628 + Hnrnpl protein_coding retained_intron MGP_LPJ_T0082438.1 MGP_LPJ_G0031864.1 mouse_genomes_project 7 27985037 27993917 + MGP_LPJ_P0082438 Hnrnpl protein_coding nonsense_mediated_decay MGP_LPJ_T0082439.1 MGP_LPJ_G0031864.1 mouse_genomes_project 7 27985070 27986140 + Hnrnpl protein_coding retained_intron MGP_LPJ_T0082440.1 MGP_LPJ_G0031864.1 mouse_genomes_project 7 27986516 27990392 + Hnrnpl protein_coding retained_intron MGP_LPJ_T0082441.1 MGP_LPJ_G0031864.1 mouse_genomes_project 7 27986797 27992391 + Hnrnpl protein_coding retained_intron MGP_LPJ_T0082442.1 MGP_LPJ_G0031864.1 mouse_genomes_project 7 27989525 27990404 + Hnrnpl protein_coding retained_intron MGP_LPJ_T0082443.1 MGP_LPJ_G0031864.1 mouse_genomes_project 7 27992880 27993912 + Hnrnpl protein_coding retained_intron MGP_LPJ_T0083144.1 MGP_LPJ_G0032010.1 mouse_genomes_project 7 41630477 41684896 - MGP_LPJ_P0083144 Vmn2r57 protein_coding protein_coding MGP_LPJ_T0100954.1 MGP_LPJ_G0039217.1 mouse_genomes_project 7 46043132 46043202 - Snord34 snoRNA snoRNA MGP_LPJ_T0085176.1 MGP_LPJ_G0032512.1 mouse_genomes_project 7 106465074 106556331 - MGP_LPJ_P0085176 Nup98 protein_coding unknown_likely_coding MGP_LPJ_T0085177.1 MGP_LPJ_G0032512.1 mouse_genomes_project 7 106478983 106556356 - MGP_LPJ_P0085177 Nup98 protein_coding protein_coding MGP_LPJ_T0100981.1 MGP_LPJ_G0039244.1 mouse_genomes_project 7 103596176 103596324 - Snord15a snoRNA snoRNA MGP_LPJ_T0102372.1 MGP_LPJ_G0040408.1 mouse_genomes_project 7 44774155 44795839 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0083710.1 MGP_LPJ_G0032166.1 mouse_genomes_project 7 47151372 47152545 - MGP_LPJ_P0083710 Kcnj11 protein_coding protein_coding MGP_LPJ_T0082628.1 MGP_LPJ_G0031911.1 mouse_genomes_project 7 29544950 29585104 - MGP_LPJ_P0082628 Wdr62 protein_coding protein_coding MGP_LPJ_T0082629.1 MGP_LPJ_G0031911.1 mouse_genomes_project 7 29544950 29585081 - MGP_LPJ_P0082629 Wdr62 protein_coding nonsense_mediated_decay MGP_LPJ_T0082630.1 MGP_LPJ_G0031911.1 mouse_genomes_project 7 29544950 29567375 - MGP_LPJ_P0082630 Wdr62 protein_coding protein_coding MGP_LPJ_T0082631.1 MGP_LPJ_G0031911.1 mouse_genomes_project 7 29544955 29545696 - Wdr62 protein_coding processed_transcript MGP_LPJ_T0082632.1 MGP_LPJ_G0031911.1 mouse_genomes_project 7 29546509 29547088 - MGP_LPJ_P0082632 Wdr62 protein_coding protein_coding MGP_LPJ_T0082633.1 MGP_LPJ_G0031911.1 mouse_genomes_project 7 29550237 29556665 - Wdr62 protein_coding retained_intron MGP_LPJ_T0082634.1 MGP_LPJ_G0031911.1 mouse_genomes_project 7 29554629 29555373 - Wdr62 protein_coding retained_intron MGP_LPJ_T0010890.1 MGP_LPJ_G0009008.1 mouse_genomes_project 7 46043449 46043523 - Mir5121 miRNA miRNA MGP_LPJ_T0015712.1 MGP_LPJ_G0013803.1 mouse_genomes_project 7 33260666 33261393 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002282.1 MGP_LPJ_G0002190.1 mouse_genomes_project 7 76555041 76555198 + TEC TEC MGP_LPJ_T0084750.1 MGP_LPJ_G0032422.1 mouse_genomes_project 7 96550449 96646570 + MGP_LPJ_P0084750 Rab30 protein_coding protein_coding MGP_LPJ_T0084751.1 MGP_LPJ_G0032422.1 mouse_genomes_project 7 96628734 96646100 + MGP_LPJ_P0084751 Rab30 protein_coding protein_coding MGP_LPJ_T0084752.1 MGP_LPJ_G0032422.1 mouse_genomes_project 7 96628749 96646097 + MGP_LPJ_P0084752 Rab30 protein_coding protein_coding MGP_LPJ_T0081888.1 MGP_LPJ_G0031722.1 mouse_genomes_project 7 22838525 22856591 - MGP_LPJ_P0081888 Zfp111 protein_coding protein_coding MGP_LPJ_T0081889.1 MGP_LPJ_G0031722.1 mouse_genomes_project 7 22841553 22849597 - MGP_LPJ_P0081889 Zfp111 protein_coding protein_coding MGP_LPJ_T0081890.1 MGP_LPJ_G0031722.1 mouse_genomes_project 7 22842761 22859977 - MGP_LPJ_P0081890 Zfp111 protein_coding protein_coding MGP_LPJ_T0081891.1 MGP_LPJ_G0031722.1 mouse_genomes_project 7 22850358 22856569 - Zfp111 protein_coding retained_intron MGP_LPJ_T0081892.1 MGP_LPJ_G0031722.1 mouse_genomes_project 7 22851775 22859977 - Zfp111 protein_coding processed_transcript MGP_LPJ_T0100985.1 MGP_LPJ_G0039248.1 mouse_genomes_project 7 111263666 111263802 + Gm22372 snoRNA snoRNA MGP_LPJ_T0015646.1 MGP_LPJ_G0013737.1 mouse_genomes_project 7 1644510 1645111 + processed_pseudogene processed_pseudogene MGP_LPJ_T0081967.1 MGP_LPJ_G0031744.1 mouse_genomes_project 7 23440948 23448687 - MGP_LPJ_P0081967 Gm4763 protein_coding protein_coding MGP_LPJ_T0081968.1 MGP_LPJ_G0031744.1 mouse_genomes_project 7 23443030 23444672 - Gm4763 protein_coding processed_transcript MGP_LPJ_T0085148.1 MGP_LPJ_G0032505.1 mouse_genomes_project 7 106360308 106407144 - MGP_LPJ_P0085148 Rnf121 protein_coding protein_coding MGP_LPJ_T0085149.1 MGP_LPJ_G0032505.1 mouse_genomes_project 7 106360323 106407455 - MGP_LPJ_P0085149 Rnf121 protein_coding protein_coding MGP_LPJ_T0085150.1 MGP_LPJ_G0032505.1 mouse_genomes_project 7 106361303 106402466 - MGP_LPJ_P0085150 Rnf121 protein_coding protein_coding MGP_LPJ_T0085151.1 MGP_LPJ_G0032505.1 mouse_genomes_project 7 106361604 106365748 - Rnf121 protein_coding retained_intron MGP_LPJ_T0085152.1 MGP_LPJ_G0032505.1 mouse_genomes_project 7 106370795 106407103 - MGP_LPJ_P0085152 Rnf121 protein_coding protein_coding MGP_LPJ_T0085153.1 MGP_LPJ_G0032505.1 mouse_genomes_project 7 106377097 106407144 - Rnf121 protein_coding processed_transcript MGP_LPJ_T0085154.1 MGP_LPJ_G0032505.1 mouse_genomes_project 7 106381337 106407030 - MGP_LPJ_P0085154 Rnf121 protein_coding protein_coding MGP_LPJ_T0015720.1 MGP_LPJ_G0013811.1 mouse_genomes_project 7 34142384 34143029 - processed_pseudogene processed_pseudogene MGP_LPJ_T0086543.1 MGP_LPJ_G0032954.1 mouse_genomes_project 7 133244980 133248041 - Zfp688 protein_coding retained_intron MGP_LPJ_T0086544.1 MGP_LPJ_G0032954.1 mouse_genomes_project 7 133244980 133248053 - MGP_LPJ_P0086544 Zfp688 protein_coding nonsense_mediated_decay MGP_LPJ_T0086545.1 MGP_LPJ_G0032954.1 mouse_genomes_project 7 133244980 133248048 - MGP_LPJ_P0086545 Zfp688 protein_coding protein_coding MGP_LPJ_T0086546.1 MGP_LPJ_G0032954.1 mouse_genomes_project 7 133244982 133248082 - Zfp688 protein_coding retained_intron MGP_LPJ_T0086547.1 MGP_LPJ_G0032954.1 mouse_genomes_project 7 133245359 133247864 - MGP_LPJ_P0086547 Zfp688 protein_coding protein_coding MGP_LPJ_T0086548.1 MGP_LPJ_G0032954.1 mouse_genomes_project 7 133245604 133247981 - MGP_LPJ_P0086548 Zfp688 protein_coding nonsense_mediated_decay MGP_LPJ_T0005209.1 MGP_LPJ_G0004435.1 mouse_genomes_project 7 29879713 29880333 - antisense antisense MGP_LPJ_T0084640.1 MGP_LPJ_G0032383.1 mouse_genomes_project 7 89911521 89912523 - MGP_LPJ_P0084640 Olfr304 protein_coding protein_coding MGP_LPJ_T0081549.1 MGP_LPJ_G0031611.1 mouse_genomes_project 7 14411264 14413981 + MGP_LPJ_P0081549 Tmem160 protein_coding protein_coding MGP_LPJ_T0083063.1 MGP_LPJ_G0031994.1 mouse_genomes_project 7 35318844 35379236 + MGP_LPJ_P0083063 Ankrd27 protein_coding protein_coding MGP_LPJ_T0083064.1 MGP_LPJ_G0031994.1 mouse_genomes_project 7 35318850 35338244 + MGP_LPJ_P0083064 Ankrd27 protein_coding protein_coding MGP_LPJ_T0083065.1 MGP_LPJ_G0031994.1 mouse_genomes_project 7 35318850 35347438 + MGP_LPJ_P0083065 Ankrd27 protein_coding protein_coding MGP_LPJ_T0083066.1 MGP_LPJ_G0031994.1 mouse_genomes_project 7 35318855 35373010 + MGP_LPJ_P0083066 Ankrd27 protein_coding nonsense_mediated_decay MGP_LPJ_T0083067.1 MGP_LPJ_G0031994.1 mouse_genomes_project 7 35318875 35342254 + MGP_LPJ_P0083067 Ankrd27 protein_coding nonsense_mediated_decay MGP_LPJ_T0083068.1 MGP_LPJ_G0031994.1 mouse_genomes_project 7 35318877 35379236 + MGP_LPJ_P0083068 Ankrd27 protein_coding protein_coding MGP_LPJ_T0083069.1 MGP_LPJ_G0031994.1 mouse_genomes_project 7 35338026 35342724 + Ankrd27 protein_coding retained_intron MGP_LPJ_T0083070.1 MGP_LPJ_G0031994.1 mouse_genomes_project 7 35350055 35352977 + Ankrd27 protein_coding retained_intron MGP_LPJ_T0083071.1 MGP_LPJ_G0031994.1 mouse_genomes_project 7 35353879 35366388 + MGP_LPJ_P0083071 Ankrd27 protein_coding protein_coding MGP_LPJ_T0083072.1 MGP_LPJ_G0031994.1 mouse_genomes_project 7 35357486 35365483 + MGP_LPJ_P0083072 Ankrd27 protein_coding nonsense_mediated_decay MGP_LPJ_T0087644.1 MGP_LPJ_G0033200.1 mouse_genomes_project 7 150702686 150721268 + MGP_LPJ_P0087644 Dhcr7 protein_coding protein_coding MGP_LPJ_T0087645.1 MGP_LPJ_G0033200.1 mouse_genomes_project 7 150702874 150721263 + MGP_LPJ_P0087645 Dhcr7 protein_coding protein_coding MGP_LPJ_T0087646.1 MGP_LPJ_G0033200.1 mouse_genomes_project 7 150703031 150718365 + MGP_LPJ_P0087646 Dhcr7 protein_coding protein_coding MGP_LPJ_T0087647.1 MGP_LPJ_G0033200.1 mouse_genomes_project 7 150703035 150715942 + MGP_LPJ_P0087647 Dhcr7 protein_coding protein_coding MGP_LPJ_T0087648.1 MGP_LPJ_G0033200.1 mouse_genomes_project 7 150703055 150710684 + Dhcr7 protein_coding processed_transcript MGP_LPJ_T0087649.1 MGP_LPJ_G0033200.1 mouse_genomes_project 7 150713724 150716095 + Dhcr7 protein_coding processed_transcript MGP_LPJ_T0087650.1 MGP_LPJ_G0033200.1 mouse_genomes_project 7 150714129 150720205 + Dhcr7 protein_coding processed_transcript MGP_LPJ_T0102426.1 MGP_LPJ_G0040462.1 mouse_genomes_project 7 89364390 89364698 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0085608.1 MGP_LPJ_G0032761.1 mouse_genomes_project 7 114674073 114682573 + MGP_LPJ_P0085608 Akip1 protein_coding protein_coding MGP_LPJ_T0085609.1 MGP_LPJ_G0032761.1 mouse_genomes_project 7 114674135 114679357 + MGP_LPJ_P0085609 Akip1 protein_coding protein_coding MGP_LPJ_T0085610.1 MGP_LPJ_G0032761.1 mouse_genomes_project 7 114679216 114682352 + Akip1 protein_coding processed_transcript MGP_LPJ_T0015663.1 MGP_LPJ_G0013754.1 mouse_genomes_project 7 10997210 10997532 + processed_pseudogene processed_pseudogene MGP_LPJ_T0081788.1 MGP_LPJ_G0031686.1 mouse_genomes_project 7 17871267 17905147 - MGP_LPJ_P0081788 Ppp1r37 protein_coding protein_coding MGP_LPJ_T0085253.1 MGP_LPJ_G0032558.1 mouse_genomes_project 7 107638949 107639885 + MGP_LPJ_P0085253 Olfr594 protein_coding protein_coding MGP_LPJ_T0086811.1 MGP_LPJ_G0033002.1 mouse_genomes_project 7 134607153 134650451 - MGP_LPJ_P0086811 Mcmbp protein_coding protein_coding MGP_LPJ_T0086812.1 MGP_LPJ_G0033002.1 mouse_genomes_project 7 134608462 134650442 - MGP_LPJ_P0086812 Mcmbp protein_coding protein_coding MGP_LPJ_T0086813.1 MGP_LPJ_G0033002.1 mouse_genomes_project 7 134608882 134609901 - Mcmbp protein_coding processed_transcript MGP_LPJ_T0086814.1 MGP_LPJ_G0033002.1 mouse_genomes_project 7 134610004 134613297 - Mcmbp protein_coding retained_intron MGP_LPJ_T0086815.1 MGP_LPJ_G0033002.1 mouse_genomes_project 7 134622842 134625091 - Mcmbp protein_coding retained_intron MGP_LPJ_T0015651.1 MGP_LPJ_G0013742.1 mouse_genomes_project 7 3066742 3067697 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015774.1 MGP_LPJ_G0013865.1 mouse_genomes_project 7 67592512 67593768 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015763.1 MGP_LPJ_G0013854.1 mouse_genomes_project 7 58649358 58650181 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009054.1 MGP_LPJ_G0007287.1 mouse_genomes_project 7 135344162 135350189 - Gm44591 lincRNA lincRNA MGP_LPJ_T0102371.1 MGP_LPJ_G0040407.1 mouse_genomes_project 7 44770286 44772347 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002295.1 MGP_LPJ_G0002203.1 mouse_genomes_project 7 81857073 81858150 - TEC TEC MGP_LPJ_T0085264.1 MGP_LPJ_G0032568.1 mouse_genomes_project 7 107926144 107927095 + MGP_LPJ_P0085264 Olfr608 protein_coding protein_coding MGP_LPJ_T0100993.1 MGP_LPJ_G0039256.1 mouse_genomes_project 7 121556381 121556468 - Snord14a snoRNA snoRNA MGP_LPJ_T0102411.1 MGP_LPJ_G0040447.1 mouse_genomes_project 7 88325937 88328486 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0087585.1 MGP_LPJ_G0033186.1 mouse_genomes_project 7 149868962 149870807 + MGP_LPJ_P0087585 Tssc4 protein_coding protein_coding MGP_LPJ_T0087586.1 MGP_LPJ_G0033186.1 mouse_genomes_project 7 149869054 149870260 + MGP_LPJ_P0087586 Tssc4 protein_coding protein_coding MGP_LPJ_T0087587.1 MGP_LPJ_G0033186.1 mouse_genomes_project 7 149869081 149870801 + MGP_LPJ_P0087587 Tssc4 protein_coding protein_coding MGP_LPJ_T0087588.1 MGP_LPJ_G0033186.1 mouse_genomes_project 7 149869081 149870801 + MGP_LPJ_P0087588 Tssc4 protein_coding protein_coding MGP_LPJ_T0087589.1 MGP_LPJ_G0033186.1 mouse_genomes_project 7 149869137 149870259 + MGP_LPJ_P0087589 Tssc4 protein_coding protein_coding MGP_LPJ_T0087590.1 MGP_LPJ_G0033186.1 mouse_genomes_project 7 149869257 149870323 + MGP_LPJ_P0087590 Tssc4 protein_coding protein_coding MGP_LPJ_T0087182.1 MGP_LPJ_G0033100.1 mouse_genomes_project 7 147264027 147264963 + MGP_LPJ_P0087182 Olfr61 protein_coding protein_coding MGP_LPJ_T0087171.1 MGP_LPJ_G0033089.1 mouse_genomes_project 7 146950709 146951759 + MGP_LPJ_P0087171 Olfr525 protein_coding protein_coding MGP_LPJ_T0015847.1 MGP_LPJ_G0013938.1 mouse_genomes_project 7 119880420 119881545 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008848.1 MGP_LPJ_G0007149.1 mouse_genomes_project 7 34743063 34752520 - Gm45096 lincRNA lincRNA MGP_LPJ_T0102405.1 MGP_LPJ_G0040441.1 mouse_genomes_project 7 49818323 49819308 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0010903.1 MGP_LPJ_G0009021.1 mouse_genomes_project 7 63954836 63954905 - Gm22466 miRNA miRNA MGP_LPJ_T0010844.1 MGP_LPJ_G0008962.1 mouse_genomes_project 7 99126 99208 + Mir291a miRNA miRNA MGP_LPJ_T0083802.1 MGP_LPJ_G0032197.1 mouse_genomes_project 7 50025176 50038277 - MGP_LPJ_P0083802 Mrgprb1 protein_coding protein_coding MGP_LPJ_T0083803.1 MGP_LPJ_G0032197.1 mouse_genomes_project 7 50027993 50038230 - MGP_LPJ_P0083803 Mrgprb1 protein_coding protein_coding MGP_LPJ_T0083804.1 MGP_LPJ_G0032197.1 mouse_genomes_project 7 50028222 50038181 - MGP_LPJ_P0083804 Mrgprb1 protein_coding protein_coding MGP_LPJ_T0085259.1 MGP_LPJ_G0032564.1 mouse_genomes_project 7 107873934 107876957 + MGP_LPJ_P0085259 protein_coding protein_coding MGP_LPJ_T0081433.1 MGP_LPJ_G0031573.1 mouse_genomes_project 7 10781427 10816154 + Lig1 protein_coding processed_transcript MGP_LPJ_T0081434.1 MGP_LPJ_G0031573.1 mouse_genomes_project 7 10781457 10816154 + MGP_LPJ_P0081434 Lig1 protein_coding protein_coding MGP_LPJ_T0081435.1 MGP_LPJ_G0031573.1 mouse_genomes_project 7 10782969 10816154 + MGP_LPJ_P0081435 Lig1 protein_coding protein_coding MGP_LPJ_T0081436.1 MGP_LPJ_G0031573.1 mouse_genomes_project 7 10782978 10796325 + MGP_LPJ_P0081436 Lig1 protein_coding protein_coding MGP_LPJ_T0081437.1 MGP_LPJ_G0031573.1 mouse_genomes_project 7 10782998 10797304 + MGP_LPJ_P0081437 Lig1 protein_coding protein_coding MGP_LPJ_T0081438.1 MGP_LPJ_G0031573.1 mouse_genomes_project 7 10783008 10816155 + Lig1 protein_coding processed_transcript MGP_LPJ_T0081439.1 MGP_LPJ_G0031573.1 mouse_genomes_project 7 10783408 10816162 + Lig1 protein_coding processed_transcript MGP_LPJ_T0081440.1 MGP_LPJ_G0031573.1 mouse_genomes_project 7 10783408 10816154 + MGP_LPJ_P0081440 Lig1 protein_coding protein_coding MGP_LPJ_T0081441.1 MGP_LPJ_G0031573.1 mouse_genomes_project 7 10784283 10816162 + Lig1 protein_coding processed_transcript MGP_LPJ_T0081442.1 MGP_LPJ_G0031573.1 mouse_genomes_project 7 10784283 10796052 + MGP_LPJ_P0081442 Lig1 protein_coding protein_coding MGP_LPJ_T0081443.1 MGP_LPJ_G0031573.1 mouse_genomes_project 7 10807613 10810798 + Lig1 protein_coding retained_intron MGP_LPJ_T0081444.1 MGP_LPJ_G0031573.1 mouse_genomes_project 7 10811972 10816094 + Lig1 protein_coding retained_intron MGP_LPJ_T0085269.1 MGP_LPJ_G0032573.1 mouse_genomes_project 7 108021002 108025484 + MGP_LPJ_P0085269 Olfr613 protein_coding protein_coding MGP_LPJ_T0082691.1 MGP_LPJ_G0031925.1 mouse_genomes_project 7 29804061 29826356 + MGP_LPJ_P0082691 Prodh2 protein_coding protein_coding MGP_LPJ_T0082692.1 MGP_LPJ_G0031925.1 mouse_genomes_project 7 29804097 29821663 + Prodh2 protein_coding processed_transcript MGP_LPJ_T0082693.1 MGP_LPJ_G0031925.1 mouse_genomes_project 7 29804097 29818921 + MGP_LPJ_P0082693 Prodh2 protein_coding protein_coding MGP_LPJ_T0082694.1 MGP_LPJ_G0031925.1 mouse_genomes_project 7 29804098 29804727 + Prodh2 protein_coding retained_intron MGP_LPJ_T0082695.1 MGP_LPJ_G0031925.1 mouse_genomes_project 7 29804098 29819149 + MGP_LPJ_P0082695 Prodh2 protein_coding protein_coding MGP_LPJ_T0082696.1 MGP_LPJ_G0031925.1 mouse_genomes_project 7 29804120 29819010 + MGP_LPJ_P0082696 Prodh2 protein_coding nonsense_mediated_decay MGP_LPJ_T0082697.1 MGP_LPJ_G0031925.1 mouse_genomes_project 7 29804219 29819217 + MGP_LPJ_P0082697 Prodh2 protein_coding protein_coding MGP_LPJ_T0082698.1 MGP_LPJ_G0031925.1 mouse_genomes_project 7 29819248 29825992 + MGP_LPJ_P0082698 Prodh2 protein_coding protein_coding MGP_LPJ_T0008949.1 MGP_LPJ_G0007226.1 mouse_genomes_project 7 81934885 81938405 - Gm44730 lincRNA lincRNA MGP_LPJ_T0082603.1 MGP_LPJ_G0031903.1 mouse_genomes_project 7 29417374 29429398 + MGP_LPJ_P0082603 Zfp382 protein_coding protein_coding MGP_LPJ_T0082604.1 MGP_LPJ_G0031903.1 mouse_genomes_project 7 29417402 29425581 + MGP_LPJ_P0082604 Zfp382 protein_coding protein_coding MGP_LPJ_T0082605.1 MGP_LPJ_G0031903.1 mouse_genomes_project 7 29420368 29428278 + Zfp382 protein_coding retained_intron MGP_LPJ_T0084496.1 MGP_LPJ_G0032329.1 mouse_genomes_project 7 84253488 84309268 + MGP_LPJ_P0084496 Zfp592 protein_coding protein_coding MGP_LPJ_T0084497.1 MGP_LPJ_G0032329.1 mouse_genomes_project 7 84286778 84287952 + Zfp592 protein_coding processed_transcript MGP_LPJ_T0084498.1 MGP_LPJ_G0032329.1 mouse_genomes_project 7 84301904 84302466 + Zfp592 protein_coding retained_intron MGP_LPJ_T0084499.1 MGP_LPJ_G0032329.1 mouse_genomes_project 7 84302180 84305557 + Zfp592 protein_coding retained_intron MGP_LPJ_T0009059.1 MGP_LPJ_G0007291.1 mouse_genomes_project 7 136529108 136532380 + lincRNA lincRNA MGP_LPJ_T0081987.1 MGP_LPJ_G0031750.1 mouse_genomes_project 7 23620001 23624818 + MGP_LPJ_P0081987 Cd79a protein_coding protein_coding MGP_LPJ_T0082319.1 MGP_LPJ_G0031828.1 mouse_genomes_project 7 26921516 26958316 + MGP_LPJ_P0082319 Zfp607a protein_coding protein_coding MGP_LPJ_T0002269.1 MGP_LPJ_G0002178.1 mouse_genomes_project 7 66652673 66653274 + TEC TEC MGP_LPJ_T0010898.1 MGP_LPJ_G0009016.1 mouse_genomes_project 7 63920370 63920449 - Gm25533 miRNA miRNA MGP_LPJ_T0100991.1 MGP_LPJ_G0039254.1 mouse_genomes_project 7 117705811 117705941 - Gm24154 snoRNA snoRNA MGP_LPJ_T0081944.1 MGP_LPJ_G0031736.1 mouse_genomes_project 7 23230781 23237028 - MGP_LPJ_P0081944 Pinlyp protein_coding protein_coding MGP_LPJ_T0015772.1 MGP_LPJ_G0013863.1 mouse_genomes_project 7 64755654 64755924 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100999.1 MGP_LPJ_G0039262.1 mouse_genomes_project 7 130126650 130126793 + Gm23168 snoRNA snoRNA MGP_LPJ_T0087063.1 MGP_LPJ_G0033060.1 mouse_genomes_project 7 145440161 145458832 - MGP_LPJ_P0087063 Bnip3 protein_coding protein_coding MGP_LPJ_T0087064.1 MGP_LPJ_G0033060.1 mouse_genomes_project 7 145443606 145458821 - Bnip3 protein_coding processed_transcript MGP_LPJ_T0087065.1 MGP_LPJ_G0033060.1 mouse_genomes_project 7 145443935 145447602 - Bnip3 protein_coding processed_transcript MGP_LPJ_T0087066.1 MGP_LPJ_G0033060.1 mouse_genomes_project 7 145447865 145458845 - Bnip3 protein_coding processed_transcript MGP_LPJ_T0087067.1 MGP_LPJ_G0033060.1 mouse_genomes_project 7 145448035 145458805 - Bnip3 protein_coding processed_transcript MGP_LPJ_T0085541.1 MGP_LPJ_G0032718.1 mouse_genomes_project 7 112864656 112866029 + MGP_LPJ_P0085541 Olfr473 protein_coding protein_coding MGP_LPJ_T0082176.1 MGP_LPJ_G0031794.1 mouse_genomes_project 7 25664794 25678357 + MGP_LPJ_P0082176 Cyp2g1 protein_coding protein_coding MGP_LPJ_T0082177.1 MGP_LPJ_G0031794.1 mouse_genomes_project 7 25672120 25676260 + Cyp2g1 protein_coding retained_intron MGP_LPJ_T0011702.1 MGP_LPJ_G0009820.1 mouse_genomes_project 7 82483730 82483988 - Gm24224 misc_RNA misc_RNA MGP_LPJ_T0102454.1 MGP_LPJ_G0040490.1 mouse_genomes_project 7 108716461 108717338 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0085282.1 MGP_LPJ_G0032585.1 mouse_genomes_project 7 108235275 108236226 + MGP_LPJ_P0085282 protein_coding protein_coding MGP_LPJ_T0083458.1 MGP_LPJ_G0032097.1 mouse_genomes_project 7 45877190 45887149 - MGP_LPJ_P0083458 protein_coding protein_coding MGP_LPJ_T0100964.1 MGP_LPJ_G0039227.1 mouse_genomes_project 7 61287931 61288010 - snoRNA snoRNA MGP_LPJ_T0008925.1 MGP_LPJ_G0007207.1 mouse_genomes_project 7 75863449 75867768 - Gm6567 lincRNA lincRNA MGP_LPJ_T0085271.1 MGP_LPJ_G0032575.1 mouse_genomes_project 7 108034416 108035370 - MGP_LPJ_P0085271 Olfr616 protein_coding protein_coding MGP_LPJ_T0081298.1 MGP_LPJ_G0031509.1 mouse_genomes_project 7 3643195 3644256 + MGP_LPJ_P0081298 Olfr1344 protein_coding protein_coding MGP_LPJ_T0083250.1 MGP_LPJ_G0032046.1 mouse_genomes_project 7 44566842 44573068 + MGP_LPJ_P0083250 Klk8 protein_coding protein_coding MGP_LPJ_T0083251.1 MGP_LPJ_G0032046.1 mouse_genomes_project 7 44566861 44572917 + MGP_LPJ_P0083251 Klk8 protein_coding protein_coding MGP_LPJ_T0083252.1 MGP_LPJ_G0032046.1 mouse_genomes_project 7 44571111 44573072 + Klk8 protein_coding retained_intron MGP_LPJ_T0084649.1 MGP_LPJ_G0032391.1 mouse_genomes_project 7 90215730 90216741 + MGP_LPJ_P0084649 Olfr293 protein_coding protein_coding MGP_LPJ_T0082205.1 MGP_LPJ_G0031804.1 mouse_genomes_project 7 26146725 26159081 - MGP_LPJ_P0082205 Snrpa protein_coding protein_coding MGP_LPJ_T0082206.1 MGP_LPJ_G0031804.1 mouse_genomes_project 7 26146725 26159566 - MGP_LPJ_P0082206 Snrpa protein_coding protein_coding MGP_LPJ_T0082207.1 MGP_LPJ_G0031804.1 mouse_genomes_project 7 26146725 26159592 - MGP_LPJ_P0082207 Snrpa protein_coding protein_coding MGP_LPJ_T0082208.1 MGP_LPJ_G0031804.1 mouse_genomes_project 7 26150651 26159081 - MGP_LPJ_P0082208 Snrpa protein_coding protein_coding MGP_LPJ_T0082209.1 MGP_LPJ_G0031804.1 mouse_genomes_project 7 26155034 26159345 - MGP_LPJ_P0082209 Snrpa protein_coding nonsense_mediated_decay MGP_LPJ_T0082210.1 MGP_LPJ_G0031804.1 mouse_genomes_project 7 26157784 26159474 - Snrpa protein_coding retained_intron MGP_LPJ_T0102330.1 MGP_LPJ_G0040367.1 mouse_genomes_project 7 13723938 13732112 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0015761.1 MGP_LPJ_G0013852.1 mouse_genomes_project 7 57772837 57773547 - processed_pseudogene processed_pseudogene MGP_LPJ_T0085379.1 MGP_LPJ_G0032651.1 mouse_genomes_project 7 109704573 109705525 + MGP_LPJ_P0085379 protein_coding protein_coding MGP_LPJ_T0082215.1 MGP_LPJ_G0031806.1 mouse_genomes_project 7 26171737 26193200 - MGP_LPJ_P0082215 Itpkc protein_coding protein_coding MGP_LPJ_T0082216.1 MGP_LPJ_G0031806.1 mouse_genomes_project 7 26172535 26177618 - Itpkc protein_coding processed_transcript MGP_LPJ_T0082217.1 MGP_LPJ_G0031806.1 mouse_genomes_project 7 26177130 26179020 - Itpkc protein_coding retained_intron MGP_LPJ_T0082218.1 MGP_LPJ_G0031806.1 mouse_genomes_project 7 26190314 26193233 - Itpkc protein_coding retained_intron MGP_LPJ_T0010942.1 MGP_LPJ_G0009060.1 mouse_genomes_project 7 132831320 132831410 - Gm44343 miRNA miRNA MGP_LPJ_T0085312.1 MGP_LPJ_G0032613.1 mouse_genomes_project 7 108673493 108675408 - MGP_LPJ_P0085312 4931431F19Rik protein_coding protein_coding MGP_LPJ_T0081347.1 MGP_LPJ_G0031545.1 mouse_genomes_project 7 9812853 9813810 - MGP_LPJ_P0081347 Vmn1r84 protein_coding protein_coding MGP_LPJ_T0085403.1 MGP_LPJ_G0032667.1 mouse_genomes_project 7 110208658 110212687 + MGP_LPJ_P0085403 Smpd1 protein_coding protein_coding MGP_LPJ_T0015758.1 MGP_LPJ_G0013849.1 mouse_genomes_project 7 57082291 57084097 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102451.1 MGP_LPJ_G0040487.1 mouse_genomes_project 7 108492352 108493307 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0085521.1 MGP_LPJ_G0032705.1 mouse_genomes_project 7 112049479 112050427 - MGP_LPJ_P0085521 protein_coding protein_coding MGP_LPJ_T0087187.1 MGP_LPJ_G0033105.1 mouse_genomes_project 7 147390037 147401274 + MGP_LPJ_P0087187 Cyp2e1 protein_coding protein_coding MGP_LPJ_T0084367.1 MGP_LPJ_G0032313.1 mouse_genomes_project 7 83466325 83472879 + MGP_LPJ_P0084367 Ngrn protein_coding protein_coding MGP_LPJ_T0084368.1 MGP_LPJ_G0032313.1 mouse_genomes_project 7 83466330 83472879 + Ngrn protein_coding retained_intron MGP_LPJ_T0085950.1 MGP_LPJ_G0032836.1 mouse_genomes_project 7 125181911 125236587 + MGP_LPJ_P0085950 2610020H08Rik protein_coding protein_coding MGP_LPJ_T0085951.1 MGP_LPJ_G0032836.1 mouse_genomes_project 7 125181915 125236587 + MGP_LPJ_P0085951 2610020H08Rik protein_coding protein_coding MGP_LPJ_T0085952.1 MGP_LPJ_G0032836.1 mouse_genomes_project 7 125182056 125207795 + 2610020H08Rik protein_coding retained_intron MGP_LPJ_T0085953.1 MGP_LPJ_G0032836.1 mouse_genomes_project 7 125182285 125236457 + MGP_LPJ_P0085953 2610020H08Rik protein_coding protein_coding MGP_LPJ_T0085954.1 MGP_LPJ_G0032836.1 mouse_genomes_project 7 125211038 125219719 + 2610020H08Rik protein_coding processed_transcript MGP_LPJ_T0085955.1 MGP_LPJ_G0032836.1 mouse_genomes_project 7 125212489 125214949 + 2610020H08Rik protein_coding retained_intron MGP_LPJ_T0085956.1 MGP_LPJ_G0032836.1 mouse_genomes_project 7 125221411 125231683 + 2610020H08Rik protein_coding processed_transcript MGP_LPJ_T0085957.1 MGP_LPJ_G0032836.1 mouse_genomes_project 7 125231849 125233080 + 2610020H08Rik protein_coding retained_intron MGP_LPJ_T0087466.1 MGP_LPJ_G0033163.1 mouse_genomes_project 7 148888007 148889204 - MGP_LPJ_P0087466 protein_coding protein_coding MGP_LPJ_T0085318.1 MGP_LPJ_G0032618.1 mouse_genomes_project 7 108742275 108748898 - MGP_LPJ_P0085318 Olfr649 protein_coding protein_coding MGP_LPJ_T0085319.1 MGP_LPJ_G0032618.1 mouse_genomes_project 7 108742276 108743215 - MGP_LPJ_P0085319 Olfr649 protein_coding protein_coding MGP_LPJ_T0015873.1 MGP_LPJ_G0013964.1 mouse_genomes_project 7 133876050 133876206 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002250.1 MGP_LPJ_G0002159.1 mouse_genomes_project 7 45150229 45150386 + TEC TEC MGP_LPJ_T0085249.1 MGP_LPJ_G0032555.1 mouse_genomes_project 7 107591378 107592323 - MGP_LPJ_P0085249 Olfr591 protein_coding protein_coding MGP_LPJ_T0005189.1 MGP_LPJ_G0004419.1 mouse_genomes_project 7 22524054 22695920 - antisense antisense MGP_LPJ_T0087177.1 MGP_LPJ_G0033095.1 mouse_genomes_project 7 147094971 147095975 + MGP_LPJ_P0087177 Olfr533 protein_coding protein_coding MGP_LPJ_T0018388.1 MGP_LPJ_G0015620.1 mouse_genomes_project 7 149314571 149328563 - Nctc1 processed_transcript antisense MGP_LPJ_T0018389.1 MGP_LPJ_G0015620.1 mouse_genomes_project 7 149323666 149328563 - Nctc1 processed_transcript retained_intron MGP_LPJ_T0084435.1 MGP_LPJ_G0032321.1 mouse_genomes_project 7 83599934 83608651 - Furin protein_coding retained_intron MGP_LPJ_T0084436.1 MGP_LPJ_G0032321.1 mouse_genomes_project 7 83600543 83615082 - MGP_LPJ_P0084436 Furin protein_coding protein_coding MGP_LPJ_T0084437.1 MGP_LPJ_G0032321.1 mouse_genomes_project 7 83600543 83617693 - MGP_LPJ_P0084437 Furin protein_coding protein_coding MGP_LPJ_T0084438.1 MGP_LPJ_G0032321.1 mouse_genomes_project 7 83600545 83614027 - MGP_LPJ_P0084438 Furin protein_coding protein_coding MGP_LPJ_T0084439.1 MGP_LPJ_G0032321.1 mouse_genomes_project 7 83608297 83614897 - MGP_LPJ_P0084439 Furin protein_coding nonsense_mediated_decay MGP_LPJ_T0084440.1 MGP_LPJ_G0032321.1 mouse_genomes_project 7 83608607 83611785 - Furin protein_coding retained_intron MGP_LPJ_T0084441.1 MGP_LPJ_G0032321.1 mouse_genomes_project 7 83610909 83617698 - MGP_LPJ_P0084441 Furin protein_coding protein_coding MGP_LPJ_T0084442.1 MGP_LPJ_G0032321.1 mouse_genomes_project 7 83610956 83615584 - MGP_LPJ_P0084442 Furin protein_coding protein_coding MGP_LPJ_T0085095.1 MGP_LPJ_G0032496.1 mouse_genomes_project 7 106151091 106166560 - MGP_LPJ_P0085095 Inppl1 protein_coding protein_coding MGP_LPJ_T0085096.1 MGP_LPJ_G0032496.1 mouse_genomes_project 7 106151098 106166256 - MGP_LPJ_P0085096 Inppl1 protein_coding protein_coding MGP_LPJ_T0085097.1 MGP_LPJ_G0032496.1 mouse_genomes_project 7 106151112 106157723 - Inppl1 protein_coding processed_transcript MGP_LPJ_T0085098.1 MGP_LPJ_G0032496.1 mouse_genomes_project 7 106152400 106166237 - MGP_LPJ_P0085098 Inppl1 protein_coding protein_coding MGP_LPJ_T0086507.1 MGP_LPJ_G0032942.1 mouse_genomes_project 7 133006086 133012078 + MGP_LPJ_P0086507 Mylpf protein_coding protein_coding MGP_LPJ_T0086508.1 MGP_LPJ_G0032942.1 mouse_genomes_project 7 133010316 133012843 + MGP_LPJ_P0086508 Mylpf protein_coding protein_coding MGP_LPJ_T0086509.1 MGP_LPJ_G0032942.1 mouse_genomes_project 7 133011234 133012043 + MGP_LPJ_P0086509 Mylpf protein_coding protein_coding MGP_LPJ_T0086510.1 MGP_LPJ_G0032942.1 mouse_genomes_project 7 133011669 133012011 + Mylpf protein_coding retained_intron MGP_LPJ_T0086511.1 MGP_LPJ_G0032942.1 mouse_genomes_project 7 133012451 133012843 + Mylpf protein_coding retained_intron MGP_LPJ_T0098667.1 MGP_LPJ_G0036937.1 mouse_genomes_project 7 81628065 81642473 - Gm44606 sense_intronic sense_intronic MGP_LPJ_T0010880.1 MGP_LPJ_G0008998.1 mouse_genomes_project 7 30439054 30439114 - Mir7050 miRNA miRNA MGP_LPJ_T0011699.1 MGP_LPJ_G0009817.1 mouse_genomes_project 7 76467990 76468243 + Gm23020 misc_RNA misc_RNA MGP_LPJ_T0083166.1 MGP_LPJ_G0032018.1 mouse_genomes_project 7 42653383 42688236 + MGP_LPJ_P0083166 Vmn2r61 protein_coding protein_coding MGP_LPJ_T0083167.1 MGP_LPJ_G0032018.1 mouse_genomes_project 7 42659359 42669581 + Vmn2r61 protein_coding processed_transcript MGP_LPJ_T0087181.1 MGP_LPJ_G0033099.1 mouse_genomes_project 7 147201412 147202344 + MGP_LPJ_P0087181 protein_coding protein_coding MGP_LPJ_T0081781.1 MGP_LPJ_G0031684.1 mouse_genomes_project 7 17844775 17855523 + MGP_LPJ_P0081781 Trappc6a protein_coding nonsense_mediated_decay MGP_LPJ_T0081782.1 MGP_LPJ_G0031684.1 mouse_genomes_project 7 17844815 17855530 + MGP_LPJ_P0081782 Trappc6a protein_coding nonsense_mediated_decay MGP_LPJ_T0081783.1 MGP_LPJ_G0031684.1 mouse_genomes_project 7 17844817 17855530 + MGP_LPJ_P0081783 Trappc6a protein_coding protein_coding MGP_LPJ_T0081784.1 MGP_LPJ_G0031684.1 mouse_genomes_project 7 17844831 17855526 + MGP_LPJ_P0081784 Trappc6a protein_coding protein_coding MGP_LPJ_T0081785.1 MGP_LPJ_G0031684.1 mouse_genomes_project 7 17844835 17854703 + Trappc6a protein_coding retained_intron MGP_LPJ_T0081786.1 MGP_LPJ_G0031684.1 mouse_genomes_project 7 17853804 17855521 + MGP_LPJ_P0081786 Trappc6a protein_coding protein_coding MGP_LPJ_T0008891.1 MGP_LPJ_G0007181.1 mouse_genomes_project 7 65663921 65770380 - 4930554H23Rik lincRNA lincRNA MGP_LPJ_T0087172.1 MGP_LPJ_G0033090.1 mouse_genomes_project 7 146965370 146966348 + MGP_LPJ_P0087172 Olfr527 protein_coding protein_coding MGP_LPJ_T0081550.1 MGP_LPJ_G0031612.1 mouse_genomes_project 7 14414212 14438355 - MGP_LPJ_P0081550 Npas1 protein_coding protein_coding MGP_LPJ_T0081609.1 MGP_LPJ_G0031626.1 mouse_genomes_project 7 14967077 14972055 + MGP_LPJ_P0081609 Pnmal1 protein_coding protein_coding MGP_LPJ_T0085857.1 MGP_LPJ_G0032812.1 mouse_genomes_project 7 123407055 123419750 - MGP_LPJ_P0085857 Arl6ip1 protein_coding protein_coding MGP_LPJ_T0085858.1 MGP_LPJ_G0032812.1 mouse_genomes_project 7 123408422 123419196 - Arl6ip1 protein_coding processed_transcript MGP_LPJ_T0085859.1 MGP_LPJ_G0032812.1 mouse_genomes_project 7 123408470 123419664 - MGP_LPJ_P0085859 Arl6ip1 protein_coding nonsense_mediated_decay MGP_LPJ_T0085860.1 MGP_LPJ_G0032812.1 mouse_genomes_project 7 123409362 123419662 - MGP_LPJ_P0085860 Arl6ip1 protein_coding protein_coding MGP_LPJ_T0085861.1 MGP_LPJ_G0032812.1 mouse_genomes_project 7 123409389 123419648 - MGP_LPJ_P0085861 Arl6ip1 protein_coding nonsense_mediated_decay MGP_LPJ_T0085862.1 MGP_LPJ_G0032812.1 mouse_genomes_project 7 123416424 123419660 - Arl6ip1 protein_coding retained_intron MGP_LPJ_T0010859.1 MGP_LPJ_G0008977.1 mouse_genomes_project 7 17383082 17383147 + Mir3100 miRNA miRNA MGP_LPJ_T0009048.1 MGP_LPJ_G0007282.1 mouse_genomes_project 7 133537253 133546253 + Gm44514 lincRNA lincRNA MGP_LPJ_T0009049.1 MGP_LPJ_G0007282.1 mouse_genomes_project 7 133543382 133546863 + Gm44514 lincRNA lincRNA MGP_LPJ_T0083836.1 MGP_LPJ_G0032206.1 mouse_genomes_project 7 51378069 51392963 + MGP_LPJ_P0083836 Htatip2 protein_coding protein_coding MGP_LPJ_T0083837.1 MGP_LPJ_G0032206.1 mouse_genomes_project 7 51378177 51392490 + MGP_LPJ_P0083837 Htatip2 protein_coding unknown_likely_coding MGP_LPJ_T0081711.1 MGP_LPJ_G0031664.1 mouse_genomes_project 7 17441160 17451527 - MGP_LPJ_P0081711 Qpctl protein_coding protein_coding MGP_LPJ_T0081712.1 MGP_LPJ_G0031664.1 mouse_genomes_project 7 17445008 17449764 - Qpctl protein_coding retained_intron MGP_LPJ_T0081866.1 MGP_LPJ_G0031712.1 mouse_genomes_project 7 22171617 22175467 + MGP_LPJ_P0081866 protein_coding protein_coding MGP_LPJ_T0085267.1 MGP_LPJ_G0032571.1 mouse_genomes_project 7 107986448 107987420 - MGP_LPJ_P0085267 protein_coding protein_coding MGP_LPJ_T0015872.1 MGP_LPJ_G0013963.1 mouse_genomes_project 7 133236874 133237046 - processed_pseudogene processed_pseudogene MGP_LPJ_T0081338.1 MGP_LPJ_G0031537.1 mouse_genomes_project 7 9270007 9270925 + MGP_LPJ_P0081338 Vmn1r75 protein_coding protein_coding MGP_LPJ_T0102459.1 MGP_LPJ_G0040495.1 mouse_genomes_project 7 109710244 109715027 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0085617.1 MGP_LPJ_G0032765.1 mouse_genomes_project 7 114734396 114759192 - MGP_LPJ_P0085617 Nrip3 protein_coding protein_coding MGP_LPJ_T0085618.1 MGP_LPJ_G0032765.1 mouse_genomes_project 7 114734400 114758712 - MGP_LPJ_P0085618 Nrip3 protein_coding protein_coding MGP_LPJ_T0082421.1 MGP_LPJ_G0031862.1 mouse_genomes_project 7 27926605 27948985 + Sirt2 protein_coding processed_transcript MGP_LPJ_T0082422.1 MGP_LPJ_G0031862.1 mouse_genomes_project 7 27926622 27948990 + MGP_LPJ_P0082422 Sirt2 protein_coding protein_coding MGP_LPJ_T0082423.1 MGP_LPJ_G0031862.1 mouse_genomes_project 7 27926637 27948985 + MGP_LPJ_P0082423 Sirt2 protein_coding protein_coding MGP_LPJ_T0082424.1 MGP_LPJ_G0031862.1 mouse_genomes_project 7 27927124 27948985 + Sirt2 protein_coding processed_transcript MGP_LPJ_T0082425.1 MGP_LPJ_G0031862.1 mouse_genomes_project 7 27936713 27937544 + Sirt2 protein_coding retained_intron MGP_LPJ_T0082426.1 MGP_LPJ_G0031862.1 mouse_genomes_project 7 27936863 27943664 + Sirt2 protein_coding retained_intron MGP_LPJ_T0082427.1 MGP_LPJ_G0031862.1 mouse_genomes_project 7 27944950 27948092 + Sirt2 protein_coding processed_transcript MGP_LPJ_T0082428.1 MGP_LPJ_G0031862.1 mouse_genomes_project 7 27945707 27947951 + Sirt2 protein_coding retained_intron MGP_LPJ_T0082429.1 MGP_LPJ_G0031862.1 mouse_genomes_project 7 27945881 27948585 + Sirt2 protein_coding retained_intron MGP_LPJ_T0015649.1 MGP_LPJ_G0013740.1 mouse_genomes_project 7 2506055 2506397 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015890.1 MGP_LPJ_G0013981.1 mouse_genomes_project 7 149061487 149061940 - processed_pseudogene processed_pseudogene MGP_LPJ_T0085532.1 MGP_LPJ_G0032711.1 mouse_genomes_project 7 112523373 112683577 + MGP_LPJ_P0085532 Ppfibp2 protein_coding protein_coding MGP_LPJ_T0085533.1 MGP_LPJ_G0032711.1 mouse_genomes_project 7 112534939 112687265 + MGP_LPJ_P0085533 Ppfibp2 protein_coding protein_coding MGP_LPJ_T0018370.1 MGP_LPJ_G0015610.1 mouse_genomes_project 7 133278600 133287502 + B130055M24Rik processed_transcript processed_transcript MGP_LPJ_T0084675.1 MGP_LPJ_G0032402.1 mouse_genomes_project 7 92785200 92988293 - MGP_LPJ_P0084675 Tmem135 protein_coding protein_coding MGP_LPJ_T0084676.1 MGP_LPJ_G0032402.1 mouse_genomes_project 7 92787333 92798175 - Tmem135 protein_coding retained_intron MGP_LPJ_T0084677.1 MGP_LPJ_G0032402.1 mouse_genomes_project 7 92791538 92988266 - MGP_LPJ_P0084677 Tmem135 protein_coding protein_coding MGP_LPJ_T0084678.1 MGP_LPJ_G0032402.1 mouse_genomes_project 7 92798001 92803503 - Tmem135 protein_coding processed_transcript MGP_LPJ_T0084679.1 MGP_LPJ_G0032402.1 mouse_genomes_project 7 92800333 93049403 - Tmem135 protein_coding processed_transcript MGP_LPJ_T0084680.1 MGP_LPJ_G0032402.1 mouse_genomes_project 7 92802863 92942703 - Tmem135 protein_coding processed_transcript MGP_LPJ_T0084681.1 MGP_LPJ_G0032402.1 mouse_genomes_project 7 92948774 92988197 - Tmem135 protein_coding retained_intron MGP_LPJ_T0084682.1 MGP_LPJ_G0032402.1 mouse_genomes_project 7 92949754 92988243 - MGP_LPJ_P0084682 Tmem135 protein_coding protein_coding MGP_LPJ_T0010861.1 MGP_LPJ_G0008979.1 mouse_genomes_project 7 17709773 17709848 + Mir343 miRNA miRNA MGP_LPJ_T0081647.1 MGP_LPJ_G0031646.1 mouse_genomes_project 7 17065847 17071452 - MGP_LPJ_P0081647 Psg19 protein_coding protein_coding MGP_LPJ_T0083469.1 MGP_LPJ_G0032101.1 mouse_genomes_project 7 45917052 45922443 + MGP_LPJ_P0083469 Rras protein_coding unknown_likely_coding MGP_LPJ_T0018371.1 MGP_LPJ_G0015611.1 mouse_genomes_project 7 134075475 134085989 - 4931431B13Rik processed_transcript antisense MGP_LPJ_T0018372.1 MGP_LPJ_G0015611.1 mouse_genomes_project 7 134084736 134085985 - 4931431B13Rik processed_transcript retained_intron MGP_LPJ_T0082068.1 MGP_LPJ_G0031764.1 mouse_genomes_project 7 24062567 24065290 + MGP_LPJ_P0082068 Prr19 protein_coding protein_coding MGP_LPJ_T0086672.1 MGP_LPJ_G0032975.1 mouse_genomes_project 7 133717824 133731260 - MGP_LPJ_P0086672 Zfp668 protein_coding protein_coding MGP_LPJ_T0086673.1 MGP_LPJ_G0032975.1 mouse_genomes_project 7 133720494 133731212 - MGP_LPJ_P0086673 Zfp668 protein_coding protein_coding MGP_LPJ_T0086674.1 MGP_LPJ_G0032975.1 mouse_genomes_project 7 133720770 133730078 - MGP_LPJ_P0086674 Zfp668 protein_coding protein_coding MGP_LPJ_T0086675.1 MGP_LPJ_G0032975.1 mouse_genomes_project 7 133720770 133731209 - MGP_LPJ_P0086675 Zfp668 protein_coding protein_coding MGP_LPJ_T0086676.1 MGP_LPJ_G0032975.1 mouse_genomes_project 7 133722818 133730089 - MGP_LPJ_P0086676 Zfp668 protein_coding protein_coding MGP_LPJ_T0086677.1 MGP_LPJ_G0032975.1 mouse_genomes_project 7 133728204 133730566 - Zfp668 protein_coding processed_transcript MGP_LPJ_T0085766.1 MGP_LPJ_G0032800.1 mouse_genomes_project 7 119738448 119751255 - MGP_LPJ_P0085766 Cyp2r1 protein_coding protein_coding MGP_LPJ_T0085767.1 MGP_LPJ_G0032800.1 mouse_genomes_project 7 119738504 119751253 - MGP_LPJ_P0085767 Cyp2r1 protein_coding nonsense_mediated_decay MGP_LPJ_T0085768.1 MGP_LPJ_G0032800.1 mouse_genomes_project 7 119738515 119751245 - MGP_LPJ_P0085768 Cyp2r1 protein_coding protein_coding MGP_LPJ_T0085769.1 MGP_LPJ_G0032800.1 mouse_genomes_project 7 119738529 119743019 - Cyp2r1 protein_coding processed_transcript MGP_LPJ_T0085770.1 MGP_LPJ_G0032800.1 mouse_genomes_project 7 119738529 119743015 - MGP_LPJ_P0085770 Cyp2r1 protein_coding nonsense_mediated_decay MGP_LPJ_T0085771.1 MGP_LPJ_G0032800.1 mouse_genomes_project 7 119738531 119751245 - MGP_LPJ_P0085771 Cyp2r1 protein_coding nonsense_mediated_decay MGP_LPJ_T0083838.1 MGP_LPJ_G0032207.1 mouse_genomes_project 7 51397825 51481140 + MGP_LPJ_P0083838 Prmt3 protein_coding protein_coding MGP_LPJ_T0083839.1 MGP_LPJ_G0032207.1 mouse_genomes_project 7 51397825 51402577 + MGP_LPJ_P0083839 Prmt3 protein_coding protein_coding MGP_LPJ_T0083840.1 MGP_LPJ_G0032207.1 mouse_genomes_project 7 51397916 51402234 + Prmt3 protein_coding processed_transcript MGP_LPJ_T0083841.1 MGP_LPJ_G0032207.1 mouse_genomes_project 7 51397916 51448457 + MGP_LPJ_P0083841 Prmt3 protein_coding nonsense_mediated_decay MGP_LPJ_T0083842.1 MGP_LPJ_G0032207.1 mouse_genomes_project 7 51397918 51400707 + Prmt3 protein_coding processed_transcript MGP_LPJ_T0083843.1 MGP_LPJ_G0032207.1 mouse_genomes_project 7 51398023 51407386 + Prmt3 protein_coding processed_transcript MGP_LPJ_T0083844.1 MGP_LPJ_G0032207.1 mouse_genomes_project 7 51399947 51407416 + MGP_LPJ_P0083844 Prmt3 protein_coding protein_coding MGP_LPJ_T0083845.1 MGP_LPJ_G0032207.1 mouse_genomes_project 7 51419952 51448653 + MGP_LPJ_P0083845 Prmt3 protein_coding protein_coding MGP_LPJ_T0018285.1 MGP_LPJ_G0015576.1 mouse_genomes_project 7 26696403 26699589 - Gm44684 processed_transcript processed_transcript MGP_LPJ_T0085296.1 MGP_LPJ_G0032597.1 mouse_genomes_project 7 108427731 108429661 - MGP_LPJ_P0085296 Olfr64 protein_coding protein_coding MGP_LPJ_T0083940.1 MGP_LPJ_G0032228.1 mouse_genomes_project 7 60613939 60794489 + MGP_LPJ_P0083940 Atp10a protein_coding protein_coding MGP_LPJ_T0081359.1 MGP_LPJ_G0031552.1 mouse_genomes_project 7 10167417 10204060 - MGP_LPJ_P0081359 Vmn2r56 protein_coding protein_coding MGP_LPJ_T0008854.1 MGP_LPJ_G0007155.1 mouse_genomes_project 7 36370238 36376593 + lincRNA lincRNA MGP_LPJ_T0081200.1 MGP_LPJ_G0031468.1 mouse_genomes_project 7 1835465 1837654 + MGP_LPJ_P0081200 Rpl28 protein_coding protein_coding MGP_LPJ_T0081201.1 MGP_LPJ_G0031468.1 mouse_genomes_project 7 1835581 1837114 + MGP_LPJ_P0081201 Rpl28 protein_coding protein_coding MGP_LPJ_T0081202.1 MGP_LPJ_G0031468.1 mouse_genomes_project 7 1835986 1836414 + Rpl28 protein_coding retained_intron MGP_LPJ_T0081203.1 MGP_LPJ_G0031468.1 mouse_genomes_project 7 1836182 1837150 + MGP_LPJ_P0081203 Rpl28 protein_coding protein_coding MGP_LPJ_T0081204.1 MGP_LPJ_G0031468.1 mouse_genomes_project 7 1836439 1837150 + Rpl28 protein_coding retained_intron MGP_LPJ_T0083789.1 MGP_LPJ_G0032188.1 mouse_genomes_project 7 48205164 48261743 - MGP_LPJ_P0083789 Ptpn5 protein_coding protein_coding MGP_LPJ_T0083790.1 MGP_LPJ_G0032188.1 mouse_genomes_project 7 48205168 48260737 - MGP_LPJ_P0083790 Ptpn5 protein_coding protein_coding MGP_LPJ_T0085302.1 MGP_LPJ_G0032603.1 mouse_genomes_project 7 108555705 108558172 + MGP_LPJ_P0085302 protein_coding protein_coding MGP_LPJ_T0010936.1 MGP_LPJ_G0009054.1 mouse_genomes_project 7 117812388 117812517 + Gm44462 miRNA miRNA MGP_LPJ_T0010927.1 MGP_LPJ_G0009045.1 mouse_genomes_project 7 89816796 89816892 - Gm23192 miRNA miRNA MGP_LPJ_T0086140.1 MGP_LPJ_G0032880.1 mouse_genomes_project 7 129040124 129045838 + MGP_LPJ_P0086140 Aqp8 protein_coding protein_coding MGP_LPJ_T0086141.1 MGP_LPJ_G0032880.1 mouse_genomes_project 7 129040145 129045820 + MGP_LPJ_P0086141 Aqp8 protein_coding protein_coding MGP_LPJ_T0086142.1 MGP_LPJ_G0032880.1 mouse_genomes_project 7 129041584 129045832 + Aqp8 protein_coding processed_transcript MGP_LPJ_T0081121.1 MGP_LPJ_G0031452.1 mouse_genomes_project 7 1513640 1526788 - MGP_LPJ_P0081121 Tnnt1 protein_coding protein_coding MGP_LPJ_T0081122.1 MGP_LPJ_G0031452.1 mouse_genomes_project 7 1513640 1526817 - MGP_LPJ_P0081122 Tnnt1 protein_coding protein_coding MGP_LPJ_T0081123.1 MGP_LPJ_G0031452.1 mouse_genomes_project 7 1513733 1526788 - MGP_LPJ_P0081123 Tnnt1 protein_coding protein_coding MGP_LPJ_T0081124.1 MGP_LPJ_G0031452.1 mouse_genomes_project 7 1513733 1526772 - MGP_LPJ_P0081124 Tnnt1 protein_coding protein_coding MGP_LPJ_T0081125.1 MGP_LPJ_G0031452.1 mouse_genomes_project 7 1513825 1525182 - MGP_LPJ_P0081125 Tnnt1 protein_coding protein_coding MGP_LPJ_T0081126.1 MGP_LPJ_G0031452.1 mouse_genomes_project 7 1513854 1518798 - Tnnt1 protein_coding retained_intron MGP_LPJ_T0081127.1 MGP_LPJ_G0031452.1 mouse_genomes_project 7 1516539 1526774 - MGP_LPJ_P0081127 Tnnt1 protein_coding protein_coding MGP_LPJ_T0081128.1 MGP_LPJ_G0031452.1 mouse_genomes_project 7 1516571 1518658 - Tnnt1 protein_coding retained_intron MGP_LPJ_T0081129.1 MGP_LPJ_G0031452.1 mouse_genomes_project 7 1517369 1525429 - MGP_LPJ_P0081129 Tnnt1 protein_coding protein_coding MGP_LPJ_T0081130.1 MGP_LPJ_G0031452.1 mouse_genomes_project 7 1517437 1525388 - MGP_LPJ_P0081130 Tnnt1 protein_coding protein_coding MGP_LPJ_T0081131.1 MGP_LPJ_G0031452.1 mouse_genomes_project 7 1518469 1527195 - MGP_LPJ_P0081131 Tnnt1 protein_coding protein_coding MGP_LPJ_T0081132.1 MGP_LPJ_G0031452.1 mouse_genomes_project 7 1524650 1525921 - MGP_LPJ_P0081132 Tnnt1 protein_coding protein_coding MGP_LPJ_T0081713.1 MGP_LPJ_G0031665.1 mouse_genomes_project 7 17451957 17455767 + MGP_LPJ_P0081713 Snrpd2 protein_coding protein_coding MGP_LPJ_T0081714.1 MGP_LPJ_G0031665.1 mouse_genomes_project 7 17452094 17453329 + Snrpd2 protein_coding retained_intron MGP_LPJ_T0084053.1 MGP_LPJ_G0032252.1 mouse_genomes_project 7 68478363 68497089 + MGP_LPJ_P0084053 Gm45213 protein_coding protein_coding MGP_LPJ_T0086816.1 MGP_LPJ_G0033003.1 mouse_genomes_project 7 134655658 134697359 + MGP_LPJ_P0086816 Sec23ip protein_coding protein_coding MGP_LPJ_T0086817.1 MGP_LPJ_G0033003.1 mouse_genomes_project 7 134655692 134660451 + Sec23ip protein_coding retained_intron MGP_LPJ_T0086818.1 MGP_LPJ_G0033003.1 mouse_genomes_project 7 134655750 134665021 + MGP_LPJ_P0086818 Sec23ip protein_coding nonsense_mediated_decay MGP_LPJ_T0086819.1 MGP_LPJ_G0033003.1 mouse_genomes_project 7 134656135 134661245 + MGP_LPJ_P0086819 Sec23ip protein_coding protein_coding MGP_LPJ_T0082345.1 MGP_LPJ_G0031840.1 mouse_genomes_project 7 27386071 27392547 - MGP_LPJ_P0082345 protein_coding protein_coding MGP_LPJ_T0082346.1 MGP_LPJ_G0031840.1 mouse_genomes_project 7 27386071 27392599 - MGP_LPJ_P0082346 protein_coding protein_coding MGP_LPJ_T0082347.1 MGP_LPJ_G0031840.1 mouse_genomes_project 7 27388479 27389602 - MGP_LPJ_P0082347 protein_coding protein_coding MGP_LPJ_T0081326.1 MGP_LPJ_G0031529.1 mouse_genomes_project 7 7843447 7844407 - MGP_LPJ_P0081326 Vmn1r68 protein_coding protein_coding MGP_LPJ_T0005172.1 MGP_LPJ_G0004409.1 mouse_genomes_project 7 4189173 4214007 - Zim3 antisense antisense MGP_LPJ_T0005173.1 MGP_LPJ_G0004409.1 mouse_genomes_project 7 4196871 4213040 - Zim3 antisense antisense MGP_LPJ_T0005174.1 MGP_LPJ_G0004409.1 mouse_genomes_project 7 4213647 4214764 - Zim3 antisense antisense MGP_LPJ_T0102416.1 MGP_LPJ_G0040452.1 mouse_genomes_project 7 88745148 88746586 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0087037.1 MGP_LPJ_G0033051.1 mouse_genomes_project 7 141911111 142082518 + MGP_LPJ_P0087037 Ptpre protein_coding protein_coding MGP_LPJ_T0083127.1 MGP_LPJ_G0032003.1 mouse_genomes_project 7 38123134 38134040 - MGP_LPJ_P0083127 Plekhf1 protein_coding protein_coding MGP_LPJ_T0086582.1 MGP_LPJ_G0032959.1 mouse_genomes_project 7 133355950 133405065 + MGP_LPJ_P0086582 Gm42715 protein_coding nonsense_mediated_decay MGP_LPJ_T0086584.1 MGP_LPJ_G0032959.1 mouse_genomes_project 7 133397563 133400640 + MGP_LPJ_P0086584 Gm42715 protein_coding nonsense_mediated_decay MGP_LPJ_T0011712.1 MGP_LPJ_G0009830.1 mouse_genomes_project 7 142947851 142948159 - Gm24444 misc_RNA misc_RNA MGP_LPJ_T0082569.1 MGP_LPJ_G0031893.1 mouse_genomes_project 7 29170418 29182760 - MGP_LPJ_P0082569 Zfp27 protein_coding protein_coding MGP_LPJ_T0082570.1 MGP_LPJ_G0031893.1 mouse_genomes_project 7 29170801 29177596 - MGP_LPJ_P0082570 Zfp27 protein_coding protein_coding MGP_LPJ_T0082571.1 MGP_LPJ_G0031893.1 mouse_genomes_project 7 29170802 29182287 - MGP_LPJ_P0082571 Zfp27 protein_coding protein_coding MGP_LPJ_T0082572.1 MGP_LPJ_G0031893.1 mouse_genomes_project 7 29170802 29182717 - MGP_LPJ_P0082572 Zfp27 protein_coding protein_coding MGP_LPJ_T0082573.1 MGP_LPJ_G0031893.1 mouse_genomes_project 7 29171165 29175943 - MGP_LPJ_P0082573 Zfp27 protein_coding protein_coding MGP_LPJ_T0082574.1 MGP_LPJ_G0031893.1 mouse_genomes_project 7 29177344 29182243 - Zfp27 protein_coding processed_transcript MGP_LPJ_T0010920.1 MGP_LPJ_G0009038.1 mouse_genomes_project 7 68823510 68823568 - Mir7057 miRNA miRNA MGP_LPJ_T0085973.1 MGP_LPJ_G0032842.1 mouse_genomes_project 7 125575505 125591386 + MGP_LPJ_P0085973 Anks4b protein_coding protein_coding MGP_LPJ_T0018303.1 MGP_LPJ_G0015584.1 mouse_genomes_project 7 46320228 46322014 + Mtag2 processed_transcript processed_transcript MGP_LPJ_T0018304.1 MGP_LPJ_G0015584.1 mouse_genomes_project 7 46321300 46322014 + Mtag2 processed_transcript pseudogene MGP_LPJ_T0087634.1 MGP_LPJ_G0033197.1 mouse_genomes_project 7 150632016 150635299 - MGP_LPJ_P0087634 Mrgprg protein_coding protein_coding MGP_LPJ_T0085499.1 MGP_LPJ_G0032684.1 mouse_genomes_project 7 111700620 111701667 - MGP_LPJ_P0085499 Olfr697 protein_coding protein_coding MGP_LPJ_T0015745.1 MGP_LPJ_G0013836.1 mouse_genomes_project 7 44082486 44082724 + processed_pseudogene processed_pseudogene MGP_LPJ_T0081959.1 MGP_LPJ_G0031739.1 mouse_genomes_project 7 23279391 23302730 + MGP_LPJ_P0081959 Ethe1 protein_coding protein_coding MGP_LPJ_T0085250.1 MGP_LPJ_G0032556.1 mouse_genomes_project 7 107603728 107606385 + MGP_LPJ_P0085250 Olfr592 protein_coding protein_coding MGP_LPJ_T0085251.1 MGP_LPJ_G0032556.1 mouse_genomes_project 7 107605446 107606385 + MGP_LPJ_P0085251 Olfr592 protein_coding protein_coding MGP_LPJ_T0083236.1 MGP_LPJ_G0032039.1 mouse_genomes_project 7 44433965 44440245 + MGP_LPJ_P0083236 Ctu1 protein_coding protein_coding MGP_LPJ_T0018377.1 MGP_LPJ_G0015614.1 mouse_genomes_project 7 136894991 136900023 - Gm5602 processed_transcript processed_transcript MGP_LPJ_T0015891.1 MGP_LPJ_G0013982.1 mouse_genomes_project 7 150416709 150417265 + processed_pseudogene processed_pseudogene MGP_LPJ_T0082386.1 MGP_LPJ_G0031851.1 mouse_genomes_project 7 27563576 27572434 + MGP_LPJ_P0082386 Lrfn1 protein_coding protein_coding MGP_LPJ_T0082387.1 MGP_LPJ_G0031851.1 mouse_genomes_project 7 27563744 27575853 + MGP_LPJ_P0082387 Lrfn1 protein_coding protein_coding MGP_LPJ_T0082388.1 MGP_LPJ_G0031851.1 mouse_genomes_project 7 27563834 27573560 + Lrfn1 protein_coding retained_intron MGP_LPJ_T0082389.1 MGP_LPJ_G0031851.1 mouse_genomes_project 7 27571806 27575788 + MGP_LPJ_P0082389 Lrfn1 protein_coding protein_coding MGP_LPJ_T0082390.1 MGP_LPJ_G0031851.1 mouse_genomes_project 7 27571806 27583060 + MGP_LPJ_P0082390 Lrfn1 protein_coding protein_coding MGP_LPJ_T0084630.1 MGP_LPJ_G0032374.1 mouse_genomes_project 7 88680579 88697249 - MGP_LPJ_P0084630 protein_coding protein_coding MGP_LPJ_T0009031.1 MGP_LPJ_G0007273.1 mouse_genomes_project 7 131931248 131956485 - Gm44875 lincRNA lincRNA MGP_LPJ_T0086079.1 MGP_LPJ_G0032871.1 mouse_genomes_project 7 127685885 127702183 - MGP_LPJ_P0086079 Ern2 protein_coding nonsense_mediated_decay MGP_LPJ_T0086080.1 MGP_LPJ_G0032871.1 mouse_genomes_project 7 127685930 127702180 - MGP_LPJ_P0086080 Ern2 protein_coding protein_coding MGP_LPJ_T0086081.1 MGP_LPJ_G0032871.1 mouse_genomes_project 7 127686050 127699931 - MGP_LPJ_P0086081 Ern2 protein_coding unknown_likely_coding MGP_LPJ_T0084767.1 MGP_LPJ_G0032426.1 mouse_genomes_project 7 100964882 101076600 + MGP_LPJ_P0084767 Nars2 protein_coding protein_coding MGP_LPJ_T0084768.1 MGP_LPJ_G0032426.1 mouse_genomes_project 7 100964898 101005296 + Nars2 protein_coding processed_transcript MGP_LPJ_T0084769.1 MGP_LPJ_G0032426.1 mouse_genomes_project 7 100964939 101053677 + MGP_LPJ_P0084769 Nars2 protein_coding protein_coding MGP_LPJ_T0084770.1 MGP_LPJ_G0032426.1 mouse_genomes_project 7 101036446 101074784 + MGP_LPJ_P0084770 Nars2 protein_coding nonsense_mediated_decay MGP_LPJ_T0084771.1 MGP_LPJ_G0032426.1 mouse_genomes_project 7 101053039 101074814 + MGP_LPJ_P0084771 Nars2 protein_coding nonsense_mediated_decay MGP_LPJ_T0087626.1 MGP_LPJ_G0033195.1 mouse_genomes_project 7 150518736 150530407 - MGP_LPJ_P0087626 Tnfrsf23 protein_coding protein_coding MGP_LPJ_T0083642.1 MGP_LPJ_G0032150.1 mouse_genomes_project 7 46728685 46737086 + MGP_LPJ_P0083642 Rpl18 protein_coding protein_coding MGP_LPJ_T0083643.1 MGP_LPJ_G0032150.1 mouse_genomes_project 7 46731294 46737087 + MGP_LPJ_P0083643 Rpl18 protein_coding protein_coding MGP_LPJ_T0083644.1 MGP_LPJ_G0032150.1 mouse_genomes_project 7 46731380 46737080 + MGP_LPJ_P0083644 Rpl18 protein_coding protein_coding MGP_LPJ_T0083645.1 MGP_LPJ_G0032150.1 mouse_genomes_project 7 46732375 46736377 + Rpl18 protein_coding retained_intron MGP_LPJ_T0083646.1 MGP_LPJ_G0032150.1 mouse_genomes_project 7 46732432 46736609 + MGP_LPJ_P0083646 Rpl18 protein_coding protein_coding MGP_LPJ_T0083647.1 MGP_LPJ_G0032150.1 mouse_genomes_project 7 46732485 46737037 + Rpl18 protein_coding retained_intron MGP_LPJ_T0083648.1 MGP_LPJ_G0032150.1 mouse_genomes_project 7 46735849 46737079 + MGP_LPJ_P0083648 Rpl18 protein_coding protein_coding MGP_LPJ_T0083649.1 MGP_LPJ_G0032150.1 mouse_genomes_project 7 46735874 46737082 + MGP_LPJ_P0083649 Rpl18 protein_coding protein_coding MGP_LPJ_T0083650.1 MGP_LPJ_G0032150.1 mouse_genomes_project 7 46736406 46737082 + Rpl18 protein_coding retained_intron MGP_LPJ_T0011694.1 MGP_LPJ_G0009812.1 mouse_genomes_project 7 24667413 24667520 + Gm23921 misc_RNA misc_RNA MGP_LPJ_T0081649.1 MGP_LPJ_G0031648.1 mouse_genomes_project 7 17122798 17140869 + MGP_LPJ_P0081649 Mill2 protein_coding protein_coding MGP_LPJ_T0081650.1 MGP_LPJ_G0031648.1 mouse_genomes_project 7 17122821 17145317 + MGP_LPJ_P0081650 Mill2 protein_coding nonsense_mediated_decay MGP_LPJ_T0081651.1 MGP_LPJ_G0031648.1 mouse_genomes_project 7 17122824 17144587 + MGP_LPJ_P0081651 Mill2 protein_coding unknown_likely_coding MGP_LPJ_T0081652.1 MGP_LPJ_G0031648.1 mouse_genomes_project 7 17122833 17138466 + Mill2 protein_coding processed_transcript MGP_LPJ_T0084754.1 MGP_LPJ_G0032424.1 mouse_genomes_project 7 96691374 96756247 + MGP_LPJ_P0084754 Prcp protein_coding protein_coding MGP_LPJ_T0015817.1 MGP_LPJ_G0013908.1 mouse_genomes_project 7 101425846 101426033 + processed_pseudogene processed_pseudogene MGP_LPJ_T0085500.1 MGP_LPJ_G0032685.1 mouse_genomes_project 7 111716653 111717589 - MGP_LPJ_P0085500 Olfr698 protein_coding protein_coding MGP_LPJ_T0101612.1 MGP_LPJ_G0039688.1 mouse_genomes_project 7 44708316 44712810 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0101613.1 MGP_LPJ_G0039688.1 mouse_genomes_project 7 44710120 44713937 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0008916.1 MGP_LPJ_G0007198.1 mouse_genomes_project 7 73896392 73903510 + 6030442E23Rik lincRNA lincRNA MGP_LPJ_T0008921.1 MGP_LPJ_G0007203.1 mouse_genomes_project 7 74681517 74744698 + 1700011C11Rik lincRNA lincRNA MGP_LPJ_T0102286.1 MGP_LPJ_G0040323.1 mouse_genomes_project 7 698980 705924 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0086480.1 MGP_LPJ_G0032936.1 mouse_genomes_project 7 132834313 132836833 - MGP_LPJ_P0086480 Zg16 protein_coding protein_coding MGP_LPJ_T0086481.1 MGP_LPJ_G0032936.1 mouse_genomes_project 7 132834313 132836135 - MGP_LPJ_P0086481 Zg16 protein_coding protein_coding MGP_LPJ_T0081825.1 MGP_LPJ_G0031696.1 mouse_genomes_project 7 18052722 18069893 - MGP_LPJ_P0081825 Tomm40 protein_coding protein_coding MGP_LPJ_T0081826.1 MGP_LPJ_G0031696.1 mouse_genomes_project 7 18052740 18069880 - MGP_LPJ_P0081826 Tomm40 protein_coding protein_coding MGP_LPJ_T0081827.1 MGP_LPJ_G0031696.1 mouse_genomes_project 7 18053231 18065381 - Tomm40 protein_coding retained_intron MGP_LPJ_T0081828.1 MGP_LPJ_G0031696.1 mouse_genomes_project 7 18054278 18054754 - MGP_LPJ_P0081828 Tomm40 protein_coding protein_coding MGP_LPJ_T0081829.1 MGP_LPJ_G0031696.1 mouse_genomes_project 7 18065858 18069883 - Tomm40 protein_coding retained_intron MGP_LPJ_T0085497.1 MGP_LPJ_G0032682.1 mouse_genomes_project 7 111642250 111643198 - MGP_LPJ_P0085497 Olfr694 protein_coding protein_coding MGP_LPJ_T0008977.1 MGP_LPJ_G0007238.1 mouse_genomes_project 7 93782096 93787243 - 2310010J17Rik lincRNA lincRNA MGP_LPJ_T0082922.1 MGP_LPJ_G0031964.1 mouse_genomes_project 7 30519037 30529384 - MGP_LPJ_P0082922 Scn1b protein_coding protein_coding MGP_LPJ_T0081673.1 MGP_LPJ_G0031657.1 mouse_genomes_project 7 17313136 17345218 + MGP_LPJ_P0081673 Sympk protein_coding protein_coding MGP_LPJ_T0081674.1 MGP_LPJ_G0031657.1 mouse_genomes_project 7 17313179 17326617 + MGP_LPJ_P0081674 Sympk protein_coding protein_coding MGP_LPJ_T0081675.1 MGP_LPJ_G0031657.1 mouse_genomes_project 7 17313182 17325731 + Sympk protein_coding retained_intron MGP_LPJ_T0081676.1 MGP_LPJ_G0031657.1 mouse_genomes_project 7 17313185 17342372 + MGP_LPJ_P0081676 Sympk protein_coding nonsense_mediated_decay MGP_LPJ_T0081677.1 MGP_LPJ_G0031657.1 mouse_genomes_project 7 17336280 17340670 + Sympk protein_coding processed_transcript MGP_LPJ_T0081678.1 MGP_LPJ_G0031657.1 mouse_genomes_project 7 17342955 17345213 + Sympk protein_coding processed_transcript MGP_LPJ_T0081679.1 MGP_LPJ_G0031657.1 mouse_genomes_project 7 17343022 17345219 + MGP_LPJ_P0081679 Sympk protein_coding protein_coding MGP_LPJ_T0081680.1 MGP_LPJ_G0031657.1 mouse_genomes_project 7 17343052 17344503 + Sympk protein_coding retained_intron MGP_LPJ_T0085285.1 MGP_LPJ_G0032588.1 mouse_genomes_project 7 108276097 108277952 - MGP_LPJ_P0085285 Olfr69 protein_coding protein_coding MGP_LPJ_T0102374.1 MGP_LPJ_G0040410.1 mouse_genomes_project 7 44793620 44795830 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0018288.1 MGP_LPJ_G0015579.1 mouse_genomes_project 7 43032069 43081393 - processed_transcript lincRNA MGP_LPJ_T0018289.1 MGP_LPJ_G0015579.1 mouse_genomes_project 7 43044269 43079913 - processed_transcript TEC MGP_LPJ_T0082330.1 MGP_LPJ_G0031833.1 mouse_genomes_project 7 27144899 27199369 + MGP_LPJ_P0082330 Fcgbp protein_coding protein_coding MGP_LPJ_T0082331.1 MGP_LPJ_G0031833.1 mouse_genomes_project 7 27144899 27199371 + MGP_LPJ_P0082331 Fcgbp protein_coding protein_coding MGP_LPJ_T0082332.1 MGP_LPJ_G0031833.1 mouse_genomes_project 7 27145241 27164345 + Fcgbp protein_coding retained_intron MGP_LPJ_T0009018.1 MGP_LPJ_G0007264.1 mouse_genomes_project 7 126100488 126104570 - 9030407P20Rik lincRNA lincRNA MGP_LPJ_T0009019.1 MGP_LPJ_G0007264.1 mouse_genomes_project 7 126100784 126104610 - 9030407P20Rik lincRNA lincRNA MGP_LPJ_T0083388.1 MGP_LPJ_G0032083.1 mouse_genomes_project 7 45603811 45625017 - MGP_LPJ_P0083388 Zfp473 protein_coding protein_coding MGP_LPJ_T0083389.1 MGP_LPJ_G0032083.1 mouse_genomes_project 7 45603821 45629384 - MGP_LPJ_P0083389 Zfp473 protein_coding protein_coding MGP_LPJ_T0083390.1 MGP_LPJ_G0032083.1 mouse_genomes_project 7 45603833 45629158 - MGP_LPJ_P0083390 Zfp473 protein_coding protein_coding MGP_LPJ_T0083391.1 MGP_LPJ_G0032083.1 mouse_genomes_project 7 45603845 45628816 - MGP_LPJ_P0083391 Zfp473 protein_coding protein_coding MGP_LPJ_T0083392.1 MGP_LPJ_G0032083.1 mouse_genomes_project 7 45604339 45629073 - MGP_LPJ_P0083392 Zfp473 protein_coding protein_coding MGP_LPJ_T0083393.1 MGP_LPJ_G0032083.1 mouse_genomes_project 7 45606789 45629116 - MGP_LPJ_P0083393 Zfp473 protein_coding protein_coding MGP_LPJ_T0083394.1 MGP_LPJ_G0032083.1 mouse_genomes_project 7 45606940 45631816 - MGP_LPJ_P0083394 Zfp473 protein_coding protein_coding MGP_LPJ_T0005296.1 MGP_LPJ_G0004495.1 mouse_genomes_project 7 115928802 115929669 + Gm16336 antisense antisense MGP_LPJ_T0084968.1 MGP_LPJ_G0032476.1 mouse_genomes_project 7 104602904 104702968 + MGP_LPJ_P0084968 C2cd3 protein_coding protein_coding MGP_LPJ_T0084969.1 MGP_LPJ_G0032476.1 mouse_genomes_project 7 104602904 104702279 + MGP_LPJ_P0084969 C2cd3 protein_coding protein_coding MGP_LPJ_T0084970.1 MGP_LPJ_G0032476.1 mouse_genomes_project 7 104602917 104656158 + MGP_LPJ_P0084970 C2cd3 protein_coding nonsense_mediated_decay MGP_LPJ_T0084971.1 MGP_LPJ_G0032476.1 mouse_genomes_project 7 104602952 104639971 + C2cd3 protein_coding retained_intron MGP_LPJ_T0084972.1 MGP_LPJ_G0032476.1 mouse_genomes_project 7 104628995 104687284 + MGP_LPJ_P0084972 C2cd3 protein_coding protein_coding MGP_LPJ_T0084973.1 MGP_LPJ_G0032476.1 mouse_genomes_project 7 104653284 104655882 + C2cd3 protein_coding retained_intron MGP_LPJ_T0084974.1 MGP_LPJ_G0032476.1 mouse_genomes_project 7 104661929 104665119 + MGP_LPJ_P0084974 C2cd3 protein_coding nonsense_mediated_decay MGP_LPJ_T0084975.1 MGP_LPJ_G0032476.1 mouse_genomes_project 7 104662957 104702970 + MGP_LPJ_P0084975 C2cd3 protein_coding protein_coding MGP_LPJ_T0084976.1 MGP_LPJ_G0032476.1 mouse_genomes_project 7 104676207 104677611 + C2cd3 protein_coding retained_intron MGP_LPJ_T0084977.1 MGP_LPJ_G0032476.1 mouse_genomes_project 7 104681655 104687673 + MGP_LPJ_P0084977 C2cd3 protein_coding nonsense_mediated_decay MGP_LPJ_T0084978.1 MGP_LPJ_G0032476.1 mouse_genomes_project 7 104684179 104687632 + C2cd3 protein_coding retained_intron MGP_LPJ_T0084979.1 MGP_LPJ_G0032476.1 mouse_genomes_project 7 104697017 104702970 + MGP_LPJ_P0084979 C2cd3 protein_coding protein_coding MGP_LPJ_T0084349.1 MGP_LPJ_G0032309.1 mouse_genomes_project 7 83382613 83427440 + MGP_LPJ_P0084349 Sema4b protein_coding protein_coding MGP_LPJ_T0084350.1 MGP_LPJ_G0032309.1 mouse_genomes_project 7 83382650 83423023 + Sema4b protein_coding retained_intron MGP_LPJ_T0084351.1 MGP_LPJ_G0032309.1 mouse_genomes_project 7 83396785 83427324 + MGP_LPJ_P0084351 Sema4b protein_coding protein_coding MGP_LPJ_T0084352.1 MGP_LPJ_G0032309.1 mouse_genomes_project 7 83396880 83415238 + Sema4b protein_coding retained_intron MGP_LPJ_T0082779.1 MGP_LPJ_G0031942.1 mouse_genomes_project 7 30031433 30041206 + Atp4a protein_coding retained_intron MGP_LPJ_T0082780.1 MGP_LPJ_G0031942.1 mouse_genomes_project 7 30031433 30047093 + MGP_LPJ_P0082780 Atp4a protein_coding protein_coding MGP_LPJ_T0082781.1 MGP_LPJ_G0031942.1 mouse_genomes_project 7 30031456 30047092 + MGP_LPJ_P0082781 Atp4a protein_coding protein_coding MGP_LPJ_T0082782.1 MGP_LPJ_G0031942.1 mouse_genomes_project 7 30037051 30040955 + MGP_LPJ_P0082782 Atp4a protein_coding nonsense_mediated_decay MGP_LPJ_T0082783.1 MGP_LPJ_G0031942.1 mouse_genomes_project 7 30042737 30046749 + Atp4a protein_coding retained_intron MGP_LPJ_T0099748.1 MGP_LPJ_G0038011.1 mouse_genomes_project 7 147761392 147761501 - Gm24962 snRNA snRNA MGP_LPJ_T0084267.1 MGP_LPJ_G0032292.1 mouse_genomes_project 7 82400784 82497460 + MGP_LPJ_P0084267 Abhd2 protein_coding protein_coding MGP_LPJ_T0084268.1 MGP_LPJ_G0032292.1 mouse_genomes_project 7 82400839 82476612 + Abhd2 protein_coding processed_transcript MGP_LPJ_T0085389.1 MGP_LPJ_G0032661.1 mouse_genomes_project 7 110016007 110017133 + MGP_LPJ_P0085389 Olfr692 protein_coding protein_coding MGP_LPJ_T0081894.1 MGP_LPJ_G0031724.1 mouse_genomes_project 7 22907947 22916070 + MGP_LPJ_P0081894 Zfp108 protein_coding protein_coding MGP_LPJ_T0081895.1 MGP_LPJ_G0031724.1 mouse_genomes_project 7 22908161 22916138 + MGP_LPJ_P0081895 Zfp108 protein_coding protein_coding MGP_LPJ_T0081896.1 MGP_LPJ_G0031724.1 mouse_genomes_project 7 22910805 22915609 + MGP_LPJ_P0081896 Zfp108 protein_coding protein_coding MGP_LPJ_T0084097.1 MGP_LPJ_G0032261.1 mouse_genomes_project 7 69202088 69286688 + MGP_LPJ_P0084097 Cers3 protein_coding protein_coding MGP_LPJ_T0087623.1 MGP_LPJ_G0033193.1 mouse_genomes_project 7 150441793 150461760 - MGP_LPJ_P0087623 Tnfrsf26 protein_coding protein_coding MGP_LPJ_T0082686.1 MGP_LPJ_G0031924.1 mouse_genomes_project 7 29765661 29768659 + MGP_LPJ_P0082686 Nphs1 protein_coding protein_coding MGP_LPJ_T0082687.1 MGP_LPJ_G0031924.1 mouse_genomes_project 7 29767365 29795833 + MGP_LPJ_P0082687 Nphs1 protein_coding protein_coding MGP_LPJ_T0082688.1 MGP_LPJ_G0031924.1 mouse_genomes_project 7 29783080 29791673 + Nphs1 protein_coding retained_intron MGP_LPJ_T0082689.1 MGP_LPJ_G0031924.1 mouse_genomes_project 7 29785922 29795495 + MGP_LPJ_P0082689 Nphs1 protein_coding nonsense_mediated_decay MGP_LPJ_T0082690.1 MGP_LPJ_G0031924.1 mouse_genomes_project 7 29794868 29795602 + Nphs1 protein_coding retained_intron MGP_LPJ_T0015883.1 MGP_LPJ_G0013974.1 mouse_genomes_project 7 141006264 141008970 + processed_pseudogene processed_pseudogene MGP_LPJ_T0084725.1 MGP_LPJ_G0032417.1 mouse_genomes_project 7 94167859 94177096 - MGP_LPJ_P0084725 Tmem126b protein_coding protein_coding MGP_LPJ_T0084726.1 MGP_LPJ_G0032417.1 mouse_genomes_project 7 94169604 94177090 - Tmem126b protein_coding retained_intron MGP_LPJ_T0015876.1 MGP_LPJ_G0013967.1 mouse_genomes_project 7 134036089 134036993 + processed_pseudogene processed_pseudogene MGP_LPJ_T0081090.1 MGP_LPJ_G0031449.1 mouse_genomes_project 7 1433010 1458604 - MGP_LPJ_P0081090 Rdh13 protein_coding nonsense_mediated_decay MGP_LPJ_T0081091.1 MGP_LPJ_G0031449.1 mouse_genomes_project 7 1433907 1458652 - MGP_LPJ_P0081091 Rdh13 protein_coding protein_coding MGP_LPJ_T0081092.1 MGP_LPJ_G0031449.1 mouse_genomes_project 7 1444540 1458184 - MGP_LPJ_P0081092 Rdh13 protein_coding protein_coding MGP_LPJ_T0081093.1 MGP_LPJ_G0031449.1 mouse_genomes_project 7 1453410 1458596 - Rdh13 protein_coding retained_intron MGP_LPJ_T0081094.1 MGP_LPJ_G0031449.1 mouse_genomes_project 7 1455654 1458645 - Rdh13 protein_coding processed_transcript MGP_LPJ_T0081095.1 MGP_LPJ_G0031449.1 mouse_genomes_project 7 1457205 1458629 - Rdh13 protein_coding processed_transcript MGP_LPJ_T0082192.1 MGP_LPJ_G0031801.1 mouse_genomes_project 7 26124912 26138092 - MGP_LPJ_P0082192 Rab4b protein_coding protein_coding MGP_LPJ_T0082193.1 MGP_LPJ_G0031801.1 mouse_genomes_project 7 26124914 26138006 - MGP_LPJ_P0082193 Rab4b protein_coding nonsense_mediated_decay MGP_LPJ_T0082194.1 MGP_LPJ_G0031801.1 mouse_genomes_project 7 26124915 26138011 - Rab4b protein_coding retained_intron MGP_LPJ_T0082196.1 MGP_LPJ_G0031801.1 mouse_genomes_project 7 26125183 26138084 - Rab4b protein_coding processed_transcript MGP_LPJ_T0082197.1 MGP_LPJ_G0031801.1 mouse_genomes_project 7 26130669 26132783 - Rab4b protein_coding retained_intron MGP_LPJ_T0082198.1 MGP_LPJ_G0031801.1 mouse_genomes_project 7 26130980 26132730 - Rab4b protein_coding processed_transcript MGP_LPJ_T0082199.1 MGP_LPJ_G0031801.1 mouse_genomes_project 7 26134067 26138072 - Rab4b protein_coding processed_transcript MGP_LPJ_T0082200.1 MGP_LPJ_G0031801.1 mouse_genomes_project 7 26134098 26138019 - Rab4b protein_coding processed_transcript MGP_LPJ_T0081016.1 MGP_LPJ_G0031435.1 mouse_genomes_project 7 653316 656223 + MGP_LPJ_P0081016 Rps9 protein_coding protein_coding MGP_LPJ_T0081017.1 MGP_LPJ_G0031435.1 mouse_genomes_project 7 653361 656221 + MGP_LPJ_P0081017 Rps9 protein_coding protein_coding MGP_LPJ_T0081018.1 MGP_LPJ_G0031435.1 mouse_genomes_project 7 653364 654201 + Rps9 protein_coding retained_intron MGP_LPJ_T0081019.1 MGP_LPJ_G0031435.1 mouse_genomes_project 7 653365 654045 + MGP_LPJ_P0081019 Rps9 protein_coding protein_coding MGP_LPJ_T0081020.1 MGP_LPJ_G0031435.1 mouse_genomes_project 7 653371 654760 + Rps9 protein_coding retained_intron MGP_LPJ_T0081021.1 MGP_LPJ_G0031435.1 mouse_genomes_project 7 653375 656186 + MGP_LPJ_P0081021 Rps9 protein_coding protein_coding MGP_LPJ_T0081022.1 MGP_LPJ_G0031435.1 mouse_genomes_project 7 653643 656202 + MGP_LPJ_P0081022 Rps9 protein_coding protein_coding MGP_LPJ_T0081023.1 MGP_LPJ_G0031435.1 mouse_genomes_project 7 653648 655711 + MGP_LPJ_P0081023 Rps9 protein_coding protein_coding MGP_LPJ_T0081024.1 MGP_LPJ_G0031435.1 mouse_genomes_project 7 653687 656220 + MGP_LPJ_P0081024 Rps9 protein_coding nonsense_mediated_decay MGP_LPJ_T0081025.1 MGP_LPJ_G0031435.1 mouse_genomes_project 7 654946 655558 + Rps9 protein_coding retained_intron MGP_LPJ_T0086876.1 MGP_LPJ_G0033011.1 mouse_genomes_project 7 136899448 136948821 + MGP_LPJ_P0086876 Plekha1 protein_coding protein_coding MGP_LPJ_T0086877.1 MGP_LPJ_G0033011.1 mouse_genomes_project 7 136899577 136929185 + Plekha1 protein_coding retained_intron MGP_LPJ_T0086878.1 MGP_LPJ_G0033011.1 mouse_genomes_project 7 136899579 136911916 + Plekha1 protein_coding retained_intron MGP_LPJ_T0086879.1 MGP_LPJ_G0033011.1 mouse_genomes_project 7 136899590 136947577 + MGP_LPJ_P0086879 Plekha1 protein_coding protein_coding MGP_LPJ_T0086880.1 MGP_LPJ_G0033011.1 mouse_genomes_project 7 136899595 136944238 + MGP_LPJ_P0086880 Plekha1 protein_coding nonsense_mediated_decay MGP_LPJ_T0086881.1 MGP_LPJ_G0033011.1 mouse_genomes_project 7 136899602 136948811 + MGP_LPJ_P0086881 Plekha1 protein_coding protein_coding MGP_LPJ_T0086882.1 MGP_LPJ_G0033011.1 mouse_genomes_project 7 136916822 136919991 + Plekha1 protein_coding retained_intron MGP_LPJ_T0086883.1 MGP_LPJ_G0033011.1 mouse_genomes_project 7 136931434 136939843 + Plekha1 protein_coding retained_intron MGP_LPJ_T0086884.1 MGP_LPJ_G0033011.1 mouse_genomes_project 7 136935006 136944093 + Plekha1 protein_coding processed_transcript MGP_LPJ_T0086885.1 MGP_LPJ_G0033011.1 mouse_genomes_project 7 136936661 136943317 + Plekha1 protein_coding retained_intron MGP_LPJ_T0086886.1 MGP_LPJ_G0033011.1 mouse_genomes_project 7 136939320 136946672 + MGP_LPJ_P0086886 Plekha1 protein_coding protein_coding MGP_LPJ_T0086887.1 MGP_LPJ_G0033011.1 mouse_genomes_project 7 136939720 136946410 + Plekha1 protein_coding retained_intron MGP_LPJ_T0087175.1 MGP_LPJ_G0033093.1 mouse_genomes_project 7 147045868 147046783 - MGP_LPJ_P0087175 Olfr531 protein_coding protein_coding MGP_LPJ_T0085511.1 MGP_LPJ_G0032695.1 mouse_genomes_project 7 111884791 111885927 + MGP_LPJ_P0085511 Olfr1532-ps1 protein_coding protein_coding MGP_LPJ_T0081399.1 MGP_LPJ_G0031563.1 mouse_genomes_project 7 10497314 10502180 - MGP_LPJ_P0081399 Zbtb45 protein_coding protein_coding MGP_LPJ_T0081400.1 MGP_LPJ_G0031563.1 mouse_genomes_project 7 10498040 10502158 - MGP_LPJ_P0081400 Zbtb45 protein_coding protein_coding MGP_LPJ_T0015832.1 MGP_LPJ_G0013923.1 mouse_genomes_project 7 108353278 108353540 + processed_pseudogene processed_pseudogene MGP_LPJ_T0086238.1 MGP_LPJ_G0032898.1 mouse_genomes_project 7 132207095 132215207 - MGP_LPJ_P0086238 Sh2b1 protein_coding protein_coding MGP_LPJ_T0086239.1 MGP_LPJ_G0032898.1 mouse_genomes_project 7 132207097 132215220 - MGP_LPJ_P0086239 Sh2b1 protein_coding protein_coding MGP_LPJ_T0086240.1 MGP_LPJ_G0032898.1 mouse_genomes_project 7 132207098 132215247 - MGP_LPJ_P0086240 Sh2b1 protein_coding protein_coding MGP_LPJ_T0086241.1 MGP_LPJ_G0032898.1 mouse_genomes_project 7 132207100 132213187 - MGP_LPJ_P0086241 Sh2b1 protein_coding nonsense_mediated_decay MGP_LPJ_T0086242.1 MGP_LPJ_G0032898.1 mouse_genomes_project 7 132207100 132214939 - MGP_LPJ_P0086242 Sh2b1 protein_coding protein_coding MGP_LPJ_T0086243.1 MGP_LPJ_G0032898.1 mouse_genomes_project 7 132207100 132214941 - MGP_LPJ_P0086243 Sh2b1 protein_coding protein_coding MGP_LPJ_T0086244.1 MGP_LPJ_G0032898.1 mouse_genomes_project 7 132207106 132215167 - MGP_LPJ_P0086244 Sh2b1 protein_coding protein_coding MGP_LPJ_T0086245.1 MGP_LPJ_G0032898.1 mouse_genomes_project 7 132209000 132210300 - Sh2b1 protein_coding processed_transcript MGP_LPJ_T0086246.1 MGP_LPJ_G0032898.1 mouse_genomes_project 7 132212910 132215541 - MGP_LPJ_P0086246 Sh2b1 protein_coding protein_coding MGP_LPJ_T0086430.1 MGP_LPJ_G0032925.1 mouse_genomes_project 7 132702800 132720409 + MGP_LPJ_P0086430 Kctd13 protein_coding protein_coding MGP_LPJ_T0086431.1 MGP_LPJ_G0032925.1 mouse_genomes_project 7 132703842 132716137 + Kctd13 protein_coding retained_intron MGP_LPJ_T0086432.1 MGP_LPJ_G0032925.1 mouse_genomes_project 7 132716825 132719745 + Kctd13 protein_coding retained_intron MGP_LPJ_T0087277.1 MGP_LPJ_G0033131.1 mouse_genomes_project 7 147866667 147873423 + Lrrc56 protein_coding retained_intron MGP_LPJ_T0087278.1 MGP_LPJ_G0033131.1 mouse_genomes_project 7 147867488 147882211 + MGP_LPJ_P0087278 Lrrc56 protein_coding protein_coding MGP_LPJ_T0087279.1 MGP_LPJ_G0033131.1 mouse_genomes_project 7 147867631 147870772 + Lrrc56 protein_coding processed_transcript MGP_LPJ_T0087280.1 MGP_LPJ_G0033131.1 mouse_genomes_project 7 147869422 147872320 + Lrrc56 protein_coding processed_transcript MGP_LPJ_T0085303.1 MGP_LPJ_G0032604.1 mouse_genomes_project 7 108555705 108558172 + MGP_LPJ_P0085303 protein_coding protein_coding MGP_LPJ_T0085969.1 MGP_LPJ_G0032840.1 mouse_genomes_project 7 125504173 125523258 + MGP_LPJ_P0085969 Tmem159 protein_coding protein_coding MGP_LPJ_T0085970.1 MGP_LPJ_G0032840.1 mouse_genomes_project 7 125504192 125507037 + Tmem159 protein_coding retained_intron MGP_LPJ_T0085971.1 MGP_LPJ_G0032840.1 mouse_genomes_project 7 125504705 125523264 + MGP_LPJ_P0085971 Tmem159 protein_coding protein_coding MGP_LPJ_T0086170.1 MGP_LPJ_G0032888.1 mouse_genomes_project 7 131395729 131405753 + D430042O09Rik protein_coding retained_intron MGP_LPJ_T0086171.1 MGP_LPJ_G0032888.1 mouse_genomes_project 7 131395754 131565275 + MGP_LPJ_P0086171 D430042O09Rik protein_coding protein_coding MGP_LPJ_T0086172.1 MGP_LPJ_G0032888.1 mouse_genomes_project 7 131395803 131450674 + MGP_LPJ_P0086172 D430042O09Rik protein_coding protein_coding MGP_LPJ_T0086173.1 MGP_LPJ_G0032888.1 mouse_genomes_project 7 131476731 131553768 + D430042O09Rik protein_coding processed_transcript MGP_LPJ_T0086174.1 MGP_LPJ_G0032888.1 mouse_genomes_project 7 131521293 131567087 + D430042O09Rik protein_coding retained_intron MGP_LPJ_T0086175.1 MGP_LPJ_G0032888.1 mouse_genomes_project 7 131552449 131564022 + MGP_LPJ_P0086175 D430042O09Rik protein_coding protein_coding MGP_LPJ_T0086176.1 MGP_LPJ_G0032888.1 mouse_genomes_project 7 131557038 131559743 + D430042O09Rik protein_coding retained_intron MGP_LPJ_T0008934.1 MGP_LPJ_G0007214.1 mouse_genomes_project 7 76429523 76430258 - Gm44738 lincRNA lincRNA MGP_LPJ_T0005213.1 MGP_LPJ_G0004438.1 mouse_genomes_project 7 30232740 30233341 + Gm29439 antisense antisense MGP_LPJ_T0010883.1 MGP_LPJ_G0009001.1 mouse_genomes_project 7 43932006 43932116 + Gm24938 miRNA miRNA MGP_LPJ_T0081707.1 MGP_LPJ_G0031662.1 mouse_genomes_project 7 17396802 17417531 - MGP_LPJ_P0081707 Gm4969 protein_coding protein_coding MGP_LPJ_T0081708.1 MGP_LPJ_G0031662.1 mouse_genomes_project 7 17399307 17417504 - MGP_LPJ_P0081708 Gm4969 protein_coding nonsense_mediated_decay MGP_LPJ_T0101614.1 MGP_LPJ_G0039689.1 mouse_genomes_project 7 44933855 45045443 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101615.1 MGP_LPJ_G0039689.1 mouse_genomes_project 7 44933857 44954464 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0084967.1 MGP_LPJ_G0032475.1 mouse_genomes_project 7 104557847 104602568 - MGP_LPJ_P0084967 Ppme1 protein_coding protein_coding MGP_LPJ_T0083796.1 MGP_LPJ_G0032192.1 mouse_genomes_project 7 48581966 48611340 - MGP_LPJ_P0083796 protein_coding protein_coding MGP_LPJ_T0083797.1 MGP_LPJ_G0032192.1 mouse_genomes_project 7 48581967 48653468 - MGP_LPJ_P0083797 protein_coding protein_coding MGP_LPJ_T0084607.1 MGP_LPJ_G0032361.1 mouse_genomes_project 7 87356338 87515283 - MGP_LPJ_P0084607 Cemip protein_coding protein_coding MGP_LPJ_T0084608.1 MGP_LPJ_G0032361.1 mouse_genomes_project 7 87358270 87367820 - Cemip protein_coding retained_intron MGP_LPJ_T0084609.1 MGP_LPJ_G0032361.1 mouse_genomes_project 7 87370010 87515475 - Cemip protein_coding retained_intron MGP_LPJ_T0084610.1 MGP_LPJ_G0032361.1 mouse_genomes_project 7 87373946 87403747 - Cemip protein_coding retained_intron MGP_LPJ_T0084611.1 MGP_LPJ_G0032361.1 mouse_genomes_project 7 87384256 87515475 - Cemip protein_coding retained_intron MGP_LPJ_T0008887.1 MGP_LPJ_G0007178.1 mouse_genomes_project 7 51479036 51480475 - Gm26856 lincRNA lincRNA MGP_LPJ_T0102314.1 MGP_LPJ_G0040351.1 mouse_genomes_project 7 10754044 10754245 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0085388.1 MGP_LPJ_G0032660.1 mouse_genomes_project 7 109993907 109994876 - MGP_LPJ_P0085388 Olfr691 protein_coding protein_coding MGP_LPJ_T0087651.1 MGP_LPJ_G0033201.1 mouse_genomes_project 7 150739760 150745678 + Gm498 protein_coding processed_transcript MGP_LPJ_T0087652.1 MGP_LPJ_G0033201.1 mouse_genomes_project 7 150742058 150772831 + MGP_LPJ_P0087652 Gm498 protein_coding protein_coding MGP_LPJ_T0087653.1 MGP_LPJ_G0033201.1 mouse_genomes_project 7 150742064 150773841 + MGP_LPJ_P0087653 Gm498 protein_coding protein_coding MGP_LPJ_T0081096.1 MGP_LPJ_G0031450.1 mouse_genomes_project 7 1468272 1477585 + MGP_LPJ_P0081096 Eps8l1 protein_coding nonsense_mediated_decay MGP_LPJ_T0081097.1 MGP_LPJ_G0031450.1 mouse_genomes_project 7 1468272 1476842 + MGP_LPJ_P0081097 Eps8l1 protein_coding protein_coding MGP_LPJ_T0081098.1 MGP_LPJ_G0031450.1 mouse_genomes_project 7 1468281 1488483 + MGP_LPJ_P0081098 Eps8l1 protein_coding protein_coding MGP_LPJ_T0081099.1 MGP_LPJ_G0031450.1 mouse_genomes_project 7 1472107 1478449 + MGP_LPJ_P0081099 Eps8l1 protein_coding protein_coding MGP_LPJ_T0081100.1 MGP_LPJ_G0031450.1 mouse_genomes_project 7 1472349 1476984 + Eps8l1 protein_coding retained_intron MGP_LPJ_T0081101.1 MGP_LPJ_G0031450.1 mouse_genomes_project 7 1472356 1477794 + Eps8l1 protein_coding retained_intron MGP_LPJ_T0081102.1 MGP_LPJ_G0031450.1 mouse_genomes_project 7 1472356 1488321 + MGP_LPJ_P0081102 Eps8l1 protein_coding protein_coding MGP_LPJ_T0081103.1 MGP_LPJ_G0031450.1 mouse_genomes_project 7 1472383 1477657 + MGP_LPJ_P0081103 Eps8l1 protein_coding protein_coding MGP_LPJ_T0081104.1 MGP_LPJ_G0031450.1 mouse_genomes_project 7 1472463 1489566 + MGP_LPJ_P0081104 Eps8l1 protein_coding protein_coding MGP_LPJ_T0081105.1 MGP_LPJ_G0031450.1 mouse_genomes_project 7 1472475 1488319 + MGP_LPJ_P0081105 Eps8l1 protein_coding nonsense_mediated_decay MGP_LPJ_T0081106.1 MGP_LPJ_G0031450.1 mouse_genomes_project 7 1472483 1477534 + MGP_LPJ_P0081106 Eps8l1 protein_coding protein_coding MGP_LPJ_T0081107.1 MGP_LPJ_G0031450.1 mouse_genomes_project 7 1481540 1483475 + Eps8l1 protein_coding processed_transcript MGP_LPJ_T0081108.1 MGP_LPJ_G0031450.1 mouse_genomes_project 7 1486506 1487049 + Eps8l1 protein_coding processed_transcript MGP_LPJ_T0081109.1 MGP_LPJ_G0031450.1 mouse_genomes_project 7 1486744 1488323 + MGP_LPJ_P0081109 Eps8l1 protein_coding nonsense_mediated_decay MGP_LPJ_T0015654.1 MGP_LPJ_G0013745.1 mouse_genomes_project 7 3599277 3599487 - processed_pseudogene processed_pseudogene MGP_LPJ_T0085489.1 MGP_LPJ_G0032679.1 mouse_genomes_project 7 110482764 110487206 - MGP_LPJ_P0085489 Mrpl17 protein_coding protein_coding MGP_LPJ_T0085490.1 MGP_LPJ_G0032679.1 mouse_genomes_project 7 110485763 110487065 - MGP_LPJ_P0085490 Mrpl17 protein_coding nonsense_mediated_decay MGP_LPJ_T0085491.1 MGP_LPJ_G0032679.1 mouse_genomes_project 7 110485786 110487103 - Mrpl17 protein_coding retained_intron MGP_LPJ_T0085492.1 MGP_LPJ_G0032679.1 mouse_genomes_project 7 110485871 110487106 - Mrpl17 protein_coding processed_transcript MGP_LPJ_T0085493.1 MGP_LPJ_G0032679.1 mouse_genomes_project 7 110486227 110487135 - MGP_LPJ_P0085493 Mrpl17 protein_coding protein_coding MGP_LPJ_T0008883.1 MGP_LPJ_G0007175.1 mouse_genomes_project 7 45064231 45071246 + Gm36864 lincRNA lincRNA MGP_LPJ_T0086923.1 MGP_LPJ_G0033024.1 mouse_genomes_project 7 137692627 137704926 + MGP_LPJ_P0086923 Bub3 protein_coding protein_coding MGP_LPJ_T0082501.1 MGP_LPJ_G0031875.1 mouse_genomes_project 7 28360173 28368165 - MGP_LPJ_P0082501 Spred3 protein_coding unknown_likely_coding MGP_LPJ_T0082502.1 MGP_LPJ_G0031875.1 mouse_genomes_project 7 28364566 28368492 - Spred3 protein_coding retained_intron MGP_LPJ_T0083668.1 MGP_LPJ_G0032155.1 mouse_genomes_project 7 46832803 46839457 - MGP_LPJ_P0083668 Cyth2 protein_coding nonsense_mediated_decay MGP_LPJ_T0083669.1 MGP_LPJ_G0032155.1 mouse_genomes_project 7 46832813 46839437 - MGP_LPJ_P0083669 Cyth2 protein_coding protein_coding MGP_LPJ_T0083670.1 MGP_LPJ_G0032155.1 mouse_genomes_project 7 46832925 46839271 - MGP_LPJ_P0083670 Cyth2 protein_coding protein_coding MGP_LPJ_T0083671.1 MGP_LPJ_G0032155.1 mouse_genomes_project 7 46835209 46839427 - Cyth2 protein_coding processed_transcript MGP_LPJ_T0083672.1 MGP_LPJ_G0032155.1 mouse_genomes_project 7 46836009 46839736 - MGP_LPJ_P0083672 Cyth2 protein_coding protein_coding MGP_LPJ_T0083673.1 MGP_LPJ_G0032155.1 mouse_genomes_project 7 46836678 46839416 - Cyth2 protein_coding processed_transcript MGP_LPJ_T0085987.1 MGP_LPJ_G0032847.1 mouse_genomes_project 7 126060389 126084682 + MGP_LPJ_P0085987 Uqcrc2 protein_coding protein_coding MGP_LPJ_T0085988.1 MGP_LPJ_G0032847.1 mouse_genomes_project 7 126060453 126068431 + Uqcrc2 protein_coding processed_transcript MGP_LPJ_T0085989.1 MGP_LPJ_G0032847.1 mouse_genomes_project 7 126060728 126070456 + Uqcrc2 protein_coding processed_transcript MGP_LPJ_T0085990.1 MGP_LPJ_G0032847.1 mouse_genomes_project 7 126062875 126084365 + Uqcrc2 protein_coding processed_transcript MGP_LPJ_T0085991.1 MGP_LPJ_G0032847.1 mouse_genomes_project 7 126070131 126076144 + Uqcrc2 protein_coding retained_intron MGP_LPJ_T0085992.1 MGP_LPJ_G0032847.1 mouse_genomes_project 7 126076493 126083073 + Uqcrc2 protein_coding retained_intron MGP_LPJ_T0083291.1 MGP_LPJ_G0032064.1 mouse_genomes_project 7 45138143 45142359 - MGP_LPJ_P0083291 Clec11a protein_coding protein_coding MGP_LPJ_T0018296.1 MGP_LPJ_G0015582.1 mouse_genomes_project 7 45092320 45092765 + processed_transcript lincRNA MGP_LPJ_T0018297.1 MGP_LPJ_G0015582.1 mouse_genomes_project 7 45092403 45092762 + processed_transcript retained_intron MGP_LPJ_T0018298.1 MGP_LPJ_G0015582.1 mouse_genomes_project 7 45092434 45092763 + processed_transcript retained_intron MGP_LPJ_T0102321.1 MGP_LPJ_G0040358.1 mouse_genomes_project 7 12124242 12124942 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0018369.1 MGP_LPJ_G0015609.1 mouse_genomes_project 7 132716921 132728875 + Gm21984 processed_transcript processed_transcript MGP_LPJ_T0085534.1 MGP_LPJ_G0032712.1 mouse_genomes_project 7 112556551 112557719 - MGP_LPJ_P0085534 5330417H12Rik protein_coding protein_coding MGP_LPJ_T0086160.1 MGP_LPJ_G0032887.1 mouse_genomes_project 7 131327552 131395490 - MGP_LPJ_P0086160 Gtf3c1 protein_coding protein_coding MGP_LPJ_T0086161.1 MGP_LPJ_G0032887.1 mouse_genomes_project 7 131327552 131395593 - MGP_LPJ_P0086161 Gtf3c1 protein_coding protein_coding MGP_LPJ_T0086162.1 MGP_LPJ_G0032887.1 mouse_genomes_project 7 131330781 131336576 - Gtf3c1 protein_coding retained_intron MGP_LPJ_T0086163.1 MGP_LPJ_G0032887.1 mouse_genomes_project 7 131334128 131342650 - MGP_LPJ_P0086163 Gtf3c1 protein_coding nonsense_mediated_decay MGP_LPJ_T0086164.1 MGP_LPJ_G0032887.1 mouse_genomes_project 7 131349748 131395573 - Gtf3c1 protein_coding retained_intron MGP_LPJ_T0086165.1 MGP_LPJ_G0032887.1 mouse_genomes_project 7 131350060 131395555 - MGP_LPJ_P0086165 Gtf3c1 protein_coding nonsense_mediated_decay MGP_LPJ_T0086166.1 MGP_LPJ_G0032887.1 mouse_genomes_project 7 131350180 131356773 - MGP_LPJ_P0086166 Gtf3c1 protein_coding nonsense_mediated_decay MGP_LPJ_T0086167.1 MGP_LPJ_G0032887.1 mouse_genomes_project 7 131355423 131357540 - Gtf3c1 protein_coding retained_intron MGP_LPJ_T0086168.1 MGP_LPJ_G0032887.1 mouse_genomes_project 7 131379032 131387310 - Gtf3c1 protein_coding retained_intron MGP_LPJ_T0086169.1 MGP_LPJ_G0032887.1 mouse_genomes_project 7 131381041 131394349 - MGP_LPJ_P0086169 Gtf3c1 protein_coding protein_coding MGP_LPJ_T0085055.1 MGP_LPJ_G0032491.1 mouse_genomes_project 7 105600244 105638244 + MGP_LPJ_P0085055 Stard10 protein_coding protein_coding MGP_LPJ_T0085056.1 MGP_LPJ_G0032491.1 mouse_genomes_project 7 105606457 105637755 + MGP_LPJ_P0085056 Stard10 protein_coding protein_coding MGP_LPJ_T0085057.1 MGP_LPJ_G0032491.1 mouse_genomes_project 7 105606652 105634903 + MGP_LPJ_P0085057 Stard10 protein_coding protein_coding MGP_LPJ_T0085058.1 MGP_LPJ_G0032491.1 mouse_genomes_project 7 105606877 105637807 + MGP_LPJ_P0085058 Stard10 protein_coding protein_coding MGP_LPJ_T0085059.1 MGP_LPJ_G0032491.1 mouse_genomes_project 7 105606949 105637926 + MGP_LPJ_P0085059 Stard10 protein_coding protein_coding MGP_LPJ_T0085060.1 MGP_LPJ_G0032491.1 mouse_genomes_project 7 105607134 105635950 + MGP_LPJ_P0085060 Stard10 protein_coding protein_coding MGP_LPJ_T0085061.1 MGP_LPJ_G0032491.1 mouse_genomes_project 7 105634125 105637755 + MGP_LPJ_P0085061 Stard10 protein_coding nonsense_mediated_decay MGP_LPJ_T0015874.1 MGP_LPJ_G0013965.1 mouse_genomes_project 7 133883219 133884004 - processed_pseudogene processed_pseudogene MGP_LPJ_T0086688.1 MGP_LPJ_G0032980.1 mouse_genomes_project 7 133758757 133764851 + MGP_LPJ_P0086688 Bckdk protein_coding protein_coding MGP_LPJ_T0086689.1 MGP_LPJ_G0032980.1 mouse_genomes_project 7 133758778 133760638 + Bckdk protein_coding retained_intron MGP_LPJ_T0086690.1 MGP_LPJ_G0032980.1 mouse_genomes_project 7 133759315 133760847 + MGP_LPJ_P0086690 Bckdk protein_coding protein_coding MGP_LPJ_T0086691.1 MGP_LPJ_G0032980.1 mouse_genomes_project 7 133759437 133763284 + MGP_LPJ_P0086691 Bckdk protein_coding protein_coding MGP_LPJ_T0086692.1 MGP_LPJ_G0032980.1 mouse_genomes_project 7 133759437 133763284 + MGP_LPJ_P0086692 Bckdk protein_coding protein_coding MGP_LPJ_T0086693.1 MGP_LPJ_G0032980.1 mouse_genomes_project 7 133759592 133761059 + MGP_LPJ_P0086693 Bckdk protein_coding protein_coding MGP_LPJ_T0086694.1 MGP_LPJ_G0032980.1 mouse_genomes_project 7 133761915 133763276 + MGP_LPJ_P0086694 Bckdk protein_coding protein_coding MGP_LPJ_T0002318.1 MGP_LPJ_G0002226.1 mouse_genomes_project 7 127335375 127336989 - TEC TEC MGP_LPJ_T0005286.1 MGP_LPJ_G0004490.1 mouse_genomes_project 7 101676886 101724945 - Rsf1os2 antisense antisense MGP_LPJ_T0005287.1 MGP_LPJ_G0004490.1 mouse_genomes_project 7 101721827 101725023 - Rsf1os2 antisense antisense MGP_LPJ_T0005288.1 MGP_LPJ_G0004490.1 mouse_genomes_project 7 101724284 101725230 - Rsf1os2 antisense antisense MGP_LPJ_T0011714.1 MGP_LPJ_G0009832.1 mouse_genomes_project 7 149347815 149347885 + Gm27786 misc_RNA misc_RNA MGP_LPJ_T0086649.1 MGP_LPJ_G0032972.1 mouse_genomes_project 7 133647132 133650347 + Hsd3b7 protein_coding retained_intron MGP_LPJ_T0086650.1 MGP_LPJ_G0032972.1 mouse_genomes_project 7 133647132 133650347 + Hsd3b7 protein_coding retained_intron MGP_LPJ_T0086651.1 MGP_LPJ_G0032972.1 mouse_genomes_project 7 133647142 133648943 + MGP_LPJ_P0086651 Hsd3b7 protein_coding protein_coding MGP_LPJ_T0086652.1 MGP_LPJ_G0032972.1 mouse_genomes_project 7 133647142 133650347 + MGP_LPJ_P0086652 Hsd3b7 protein_coding protein_coding MGP_LPJ_T0086653.1 MGP_LPJ_G0032972.1 mouse_genomes_project 7 133647164 133648567 + MGP_LPJ_P0086653 Hsd3b7 protein_coding protein_coding MGP_LPJ_T0086654.1 MGP_LPJ_G0032972.1 mouse_genomes_project 7 133647174 133648815 + MGP_LPJ_P0086654 Hsd3b7 protein_coding nonsense_mediated_decay MGP_LPJ_T0086655.1 MGP_LPJ_G0032972.1 mouse_genomes_project 7 133647175 133648768 + Hsd3b7 protein_coding retained_intron MGP_LPJ_T0086656.1 MGP_LPJ_G0032972.1 mouse_genomes_project 7 133647183 133650355 + MGP_LPJ_P0086656 Hsd3b7 protein_coding protein_coding MGP_LPJ_T0086657.1 MGP_LPJ_G0032972.1 mouse_genomes_project 7 133647186 133648658 + Hsd3b7 protein_coding retained_intron MGP_LPJ_T0086658.1 MGP_LPJ_G0032972.1 mouse_genomes_project 7 133647199 133648872 + Hsd3b7 protein_coding retained_intron MGP_LPJ_T0086659.1 MGP_LPJ_G0032972.1 mouse_genomes_project 7 133647208 133648583 + MGP_LPJ_P0086659 Hsd3b7 protein_coding protein_coding MGP_LPJ_T0086660.1 MGP_LPJ_G0032972.1 mouse_genomes_project 7 133647485 133648063 + MGP_LPJ_P0086660 Hsd3b7 protein_coding protein_coding MGP_LPJ_T0100990.1 MGP_LPJ_G0039253.1 mouse_genomes_project 7 116098229 116098397 - Gm23262 snoRNA snoRNA MGP_LPJ_T0085736.1 MGP_LPJ_G0032790.1 mouse_genomes_project 7 118335228 118453602 + MGP_LPJ_P0085736 Arntl protein_coding protein_coding MGP_LPJ_T0102355.1 MGP_LPJ_G0040391.1 mouse_genomes_project 7 33452528 33453710 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002263.1 MGP_LPJ_G0002172.1 mouse_genomes_project 7 57882881 57886901 - TEC TEC MGP_LPJ_T0010934.1 MGP_LPJ_G0009052.1 mouse_genomes_project 7 114480068 114480188 + miRNA miRNA MGP_LPJ_T0005300.1 MGP_LPJ_G0004498.1 mouse_genomes_project 7 121203008 121221778 + Gm45025 antisense antisense MGP_LPJ_T0015640.1 MGP_LPJ_G0013731.1 mouse_genomes_project 7 993116 993515 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018378.1 MGP_LPJ_G0015615.1 mouse_genomes_project 7 140536582 140539815 - A130023I24Rik processed_transcript sense_intronic MGP_LPJ_T0018379.1 MGP_LPJ_G0015615.1 mouse_genomes_project 7 140536661 140538428 - A130023I24Rik processed_transcript retained_intron MGP_LPJ_T0082620.1 MGP_LPJ_G0031909.1 mouse_genomes_project 7 29537087 29538163 + MGP_LPJ_P0082620 Polr2i protein_coding protein_coding MGP_LPJ_T0082621.1 MGP_LPJ_G0031909.1 mouse_genomes_project 7 29537101 29538153 + MGP_LPJ_P0082621 Polr2i protein_coding protein_coding MGP_LPJ_T0082622.1 MGP_LPJ_G0031909.1 mouse_genomes_project 7 29537101 29538154 + MGP_LPJ_P0082622 Polr2i protein_coding protein_coding MGP_LPJ_T0082623.1 MGP_LPJ_G0031909.1 mouse_genomes_project 7 29537111 29538151 + Polr2i protein_coding retained_intron MGP_LPJ_T0082624.1 MGP_LPJ_G0031909.1 mouse_genomes_project 7 29537119 29538093 + Polr2i protein_coding retained_intron MGP_LPJ_T0082625.1 MGP_LPJ_G0031909.1 mouse_genomes_project 7 29537372 29538155 + Polr2i protein_coding processed_transcript MGP_LPJ_T0082626.1 MGP_LPJ_G0031909.1 mouse_genomes_project 7 29537701 29538150 + Polr2i protein_coding retained_intron MGP_LPJ_T0085031.1 MGP_LPJ_G0032488.1 mouse_genomes_project 7 105264628 105280259 - MGP_LPJ_P0085031 P2ry2 protein_coding protein_coding MGP_LPJ_T0085032.1 MGP_LPJ_G0032488.1 mouse_genomes_project 7 105265281 105280244 - MGP_LPJ_P0085032 P2ry2 protein_coding protein_coding MGP_LPJ_T0011715.1 MGP_LPJ_G0009833.1 mouse_genomes_project 7 150072391 150072851 + Gm27395 misc_RNA misc_RNA MGP_LPJ_T0018277.1 MGP_LPJ_G0015571.1 mouse_genomes_project 7 3880979 3891561 - Gm44015 processed_transcript lincRNA MGP_LPJ_T0018278.1 MGP_LPJ_G0015571.1 mouse_genomes_project 7 3881017 3887563 - Gm44015 processed_transcript retained_intron MGP_LPJ_T0085299.1 MGP_LPJ_G0032600.1 mouse_genomes_project 7 108469675 108470629 + MGP_LPJ_P0085299 Olfr632 protein_coding protein_coding MGP_LPJ_T0084238.1 MGP_LPJ_G0032287.1 mouse_genomes_project 7 81984436 81996916 + Aen protein_coding processed_transcript MGP_LPJ_T0084239.1 MGP_LPJ_G0032287.1 mouse_genomes_project 7 81984509 81996916 + MGP_LPJ_P0084239 Aen protein_coding protein_coding MGP_LPJ_T0084240.1 MGP_LPJ_G0032287.1 mouse_genomes_project 7 81984516 81994088 + MGP_LPJ_P0084240 Aen protein_coding protein_coding MGP_LPJ_T0084241.1 MGP_LPJ_G0032287.1 mouse_genomes_project 7 81984591 81994085 + MGP_LPJ_P0084241 Aen protein_coding protein_coding MGP_LPJ_T0084242.1 MGP_LPJ_G0032287.1 mouse_genomes_project 7 81986613 81988529 + MGP_LPJ_P0084242 Aen protein_coding protein_coding MGP_LPJ_T0084243.1 MGP_LPJ_G0032287.1 mouse_genomes_project 7 81988067 81991709 + Aen protein_coding processed_transcript MGP_LPJ_T0084244.1 MGP_LPJ_G0032287.1 mouse_genomes_project 7 81988285 81993072 + MGP_LPJ_P0084244 Aen protein_coding protein_coding MGP_LPJ_T0083787.1 MGP_LPJ_G0032186.1 mouse_genomes_project 7 48115011 48133027 - MGP_LPJ_P0083787 Spty2d1 protein_coding protein_coding MGP_LPJ_T0015888.1 MGP_LPJ_G0013979.1 mouse_genomes_project 7 146382470 146382881 + processed_pseudogene processed_pseudogene MGP_LPJ_T0084704.1 MGP_LPJ_G0032412.1 mouse_genomes_project 7 93896938 93944125 - MGP_LPJ_P0084704 Ccdc83 protein_coding protein_coding MGP_LPJ_T0084705.1 MGP_LPJ_G0032412.1 mouse_genomes_project 7 93913643 93944125 - MGP_LPJ_P0084705 Ccdc83 protein_coding protein_coding MGP_LPJ_T0084706.1 MGP_LPJ_G0032412.1 mouse_genomes_project 7 93915003 93944125 - MGP_LPJ_P0084706 Ccdc83 protein_coding protein_coding MGP_LPJ_T0082654.1 MGP_LPJ_G0031915.1 mouse_genomes_project 7 29620765 29622646 + Syne4 protein_coding processed_transcript MGP_LPJ_T0082655.1 MGP_LPJ_G0031915.1 mouse_genomes_project 7 29620774 29626768 + MGP_LPJ_P0082655 Syne4 protein_coding protein_coding MGP_LPJ_T0082656.1 MGP_LPJ_G0031915.1 mouse_genomes_project 7 29620829 29621697 + Syne4 protein_coding retained_intron MGP_LPJ_T0082657.1 MGP_LPJ_G0031915.1 mouse_genomes_project 7 29620838 29623080 + MGP_LPJ_P0082657 Syne4 protein_coding protein_coding MGP_LPJ_T0082658.1 MGP_LPJ_G0031915.1 mouse_genomes_project 7 29620843 29622849 + Syne4 protein_coding retained_intron MGP_LPJ_T0082659.1 MGP_LPJ_G0031915.1 mouse_genomes_project 7 29620846 29623074 + MGP_LPJ_P0082659 Syne4 protein_coding protein_coding MGP_LPJ_T0082660.1 MGP_LPJ_G0031915.1 mouse_genomes_project 7 29620874 29626768 + MGP_LPJ_P0082660 Syne4 protein_coding protein_coding MGP_LPJ_T0082661.1 MGP_LPJ_G0031915.1 mouse_genomes_project 7 29621136 29622334 + Syne4 protein_coding retained_intron MGP_LPJ_T0082662.1 MGP_LPJ_G0031915.1 mouse_genomes_project 7 29621297 29625073 + Syne4 protein_coding retained_intron MGP_LPJ_T0082663.1 MGP_LPJ_G0031915.1 mouse_genomes_project 7 29622007 29622856 + Syne4 protein_coding retained_intron MGP_LPJ_T0082664.1 MGP_LPJ_G0031915.1 mouse_genomes_project 7 29622760 29626768 + Syne4 protein_coding retained_intron MGP_LPJ_T0082665.1 MGP_LPJ_G0031915.1 mouse_genomes_project 7 29622930 29626764 + MGP_LPJ_P0082665 Syne4 protein_coding nonsense_mediated_decay MGP_LPJ_T0082666.1 MGP_LPJ_G0031915.1 mouse_genomes_project 7 29622975 29626767 + MGP_LPJ_P0082666 Syne4 protein_coding nonsense_mediated_decay MGP_LPJ_T0082667.1 MGP_LPJ_G0031915.1 mouse_genomes_project 7 29622976 29626762 + MGP_LPJ_P0082667 Syne4 protein_coding protein_coding MGP_LPJ_T0082668.1 MGP_LPJ_G0031915.1 mouse_genomes_project 7 29623008 29626766 + MGP_LPJ_P0082668 Syne4 protein_coding nonsense_mediated_decay MGP_LPJ_T0082669.1 MGP_LPJ_G0031915.1 mouse_genomes_project 7 29624962 29626762 + Syne4 protein_coding retained_intron MGP_LPJ_T0082670.1 MGP_LPJ_G0031915.1 mouse_genomes_project 7 29625488 29626762 + Syne4 protein_coding retained_intron MGP_LPJ_T0084632.1 MGP_LPJ_G0032376.1 mouse_genomes_project 7 89640319 89664706 - MGP_LPJ_P0084632 Vmn2r75 protein_coding protein_coding MGP_LPJ_T0081358.1 MGP_LPJ_G0031551.1 mouse_genomes_project 7 10107852 10147306 - MGP_LPJ_P0081358 Vmn2r54 protein_coding protein_coding MGP_LPJ_T0082416.1 MGP_LPJ_G0031859.1 mouse_genomes_project 7 27901614 27913740 + MGP_LPJ_P0082416 Sars2 protein_coding protein_coding MGP_LPJ_T0083193.1 MGP_LPJ_G0032027.1 mouse_genomes_project 7 44193399 44195969 + MGP_LPJ_P0083193 Cldnd2 protein_coding protein_coding MGP_LPJ_T0083194.1 MGP_LPJ_G0032027.1 mouse_genomes_project 7 44194195 44195934 + MGP_LPJ_P0083194 Cldnd2 protein_coding protein_coding MGP_LPJ_T0084150.1 MGP_LPJ_G0032272.1 mouse_genomes_project 7 74032280 74034782 - MGP_LPJ_P0084150 Gm10295 protein_coding protein_coding MGP_LPJ_T0084727.1 MGP_LPJ_G0032418.1 mouse_genomes_project 7 94806372 96245277 + MGP_LPJ_P0084727 Dlg2 protein_coding protein_coding MGP_LPJ_T0084728.1 MGP_LPJ_G0032418.1 mouse_genomes_project 7 94806392 96075301 + Dlg2 protein_coding processed_transcript MGP_LPJ_T0084729.1 MGP_LPJ_G0032418.1 mouse_genomes_project 7 94806394 96245277 + MGP_LPJ_P0084729 Dlg2 protein_coding protein_coding MGP_LPJ_T0084730.1 MGP_LPJ_G0032418.1 mouse_genomes_project 7 95431263 95770758 + Dlg2 protein_coding retained_intron MGP_LPJ_T0084731.1 MGP_LPJ_G0032418.1 mouse_genomes_project 7 95472832 96245277 + MGP_LPJ_P0084731 Dlg2 protein_coding protein_coding MGP_LPJ_T0084732.1 MGP_LPJ_G0032418.1 mouse_genomes_project 7 95473083 95716672 + Dlg2 protein_coding processed_transcript MGP_LPJ_T0084733.1 MGP_LPJ_G0032418.1 mouse_genomes_project 7 95473085 96242890 + MGP_LPJ_P0084733 Dlg2 protein_coding unknown_likely_coding MGP_LPJ_T0084734.1 MGP_LPJ_G0032418.1 mouse_genomes_project 7 95848778 96245277 + MGP_LPJ_P0084734 Dlg2 protein_coding protein_coding MGP_LPJ_T0084735.1 MGP_LPJ_G0032418.1 mouse_genomes_project 7 95972946 96076999 + Dlg2 protein_coding retained_intron MGP_LPJ_T0084736.1 MGP_LPJ_G0032418.1 mouse_genomes_project 7 96022309 96244757 + Dlg2 protein_coding processed_transcript MGP_LPJ_T0084737.1 MGP_LPJ_G0032418.1 mouse_genomes_project 7 96022513 96229401 + Dlg2 protein_coding processed_transcript MGP_LPJ_T0102383.1 MGP_LPJ_G0040419.1 mouse_genomes_project 7 44934056 44935425 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0082119.1 MGP_LPJ_G0031779.1 mouse_genomes_project 7 24472422 24490488 + MGP_LPJ_P0082119 Tgfb1 protein_coding protein_coding MGP_LPJ_T0082120.1 MGP_LPJ_G0031779.1 mouse_genomes_project 7 24473568 24474145 + Tgfb1 protein_coding processed_transcript MGP_LPJ_T0082121.1 MGP_LPJ_G0031779.1 mouse_genomes_project 7 24474310 24476883 + Tgfb1 protein_coding retained_intron MGP_LPJ_T0082122.1 MGP_LPJ_G0031779.1 mouse_genomes_project 7 24474347 24482646 + MGP_LPJ_P0082122 Tgfb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0082123.1 MGP_LPJ_G0031779.1 mouse_genomes_project 7 24477850 24482607 + Tgfb1 protein_coding retained_intron MGP_LPJ_T0085763.1 MGP_LPJ_G0032799.1 mouse_genomes_project 7 119593078 119730880 + MGP_LPJ_P0085763 Pde3b protein_coding protein_coding MGP_LPJ_T0085764.1 MGP_LPJ_G0032799.1 mouse_genomes_project 7 119694267 119696553 + Pde3b protein_coding retained_intron MGP_LPJ_T0085765.1 MGP_LPJ_G0032799.1 mouse_genomes_project 7 119711217 119722651 + Pde3b protein_coding retained_intron MGP_LPJ_T0081473.1 MGP_LPJ_G0031590.1 mouse_genomes_project 7 12344230 12345443 + MGP_LPJ_P0081473 protein_coding protein_coding MGP_LPJ_T0002233.1 MGP_LPJ_G0002142.1 mouse_genomes_project 7 34986951 34987706 + TEC TEC MGP_LPJ_T0018352.1 MGP_LPJ_G0015599.1 mouse_genomes_project 7 102226268 102228501 + Gm16938 processed_transcript processed_transcript MGP_LPJ_T0018353.1 MGP_LPJ_G0015599.1 mouse_genomes_project 7 102226315 102228501 + Gm16938 processed_transcript processed_transcript MGP_LPJ_T0015686.1 MGP_LPJ_G0013777.1 mouse_genomes_project 7 22809617 22816603 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002264.1 MGP_LPJ_G0002173.1 mouse_genomes_project 7 59725136 59727375 + TEC TEC MGP_LPJ_T0081210.1 MGP_LPJ_G0031470.1 mouse_genomes_project 7 1874870 1886520 - MGP_LPJ_P0081210 Shisa7 protein_coding protein_coding MGP_LPJ_T0081211.1 MGP_LPJ_G0031470.1 mouse_genomes_project 7 1874871 1895905 - MGP_LPJ_P0081211 Shisa7 protein_coding protein_coding MGP_LPJ_T0081212.1 MGP_LPJ_G0031470.1 mouse_genomes_project 7 1877346 1895905 - MGP_LPJ_P0081212 Shisa7 protein_coding protein_coding MGP_LPJ_T0081213.1 MGP_LPJ_G0031470.1 mouse_genomes_project 7 1879496 1880440 - Shisa7 protein_coding retained_intron MGP_LPJ_T0081214.1 MGP_LPJ_G0031470.1 mouse_genomes_project 7 1880703 1884861 - Shisa7 protein_coding retained_intron MGP_LPJ_T0085337.1 MGP_LPJ_G0032624.1 mouse_genomes_project 7 108816382 108825943 - MGP_LPJ_P0085337 protein_coding nonsense_mediated_decay MGP_LPJ_T0085338.1 MGP_LPJ_G0032624.1 mouse_genomes_project 7 108816382 108833380 - MGP_LPJ_P0085338 protein_coding protein_coding MGP_LPJ_T0010918.1 MGP_LPJ_G0009036.1 mouse_genomes_project 7 66618819 66618936 - Mir6416 miRNA miRNA MGP_LPJ_T0015679.1 MGP_LPJ_G0013770.1 mouse_genomes_project 7 15870187 15870679 + processed_pseudogene processed_pseudogene MGP_LPJ_T0082115.1 MGP_LPJ_G0031778.1 mouse_genomes_project 7 24466206 24471979 + MGP_LPJ_P0082115 B9d2 protein_coding protein_coding MGP_LPJ_T0082116.1 MGP_LPJ_G0031778.1 mouse_genomes_project 7 24466264 24469075 + MGP_LPJ_P0082116 B9d2 protein_coding protein_coding MGP_LPJ_T0082117.1 MGP_LPJ_G0031778.1 mouse_genomes_project 7 24466282 24468846 + MGP_LPJ_P0082117 B9d2 protein_coding protein_coding MGP_LPJ_T0082118.1 MGP_LPJ_G0031778.1 mouse_genomes_project 7 24466584 24471979 + MGP_LPJ_P0082118 B9d2 protein_coding protein_coding MGP_LPJ_T0002289.1 MGP_LPJ_G0002197.1 mouse_genomes_project 7 78942636 78944692 + TEC TEC MGP_LPJ_T0080986.1 MGP_LPJ_G0031430.1 mouse_genomes_project 7 577469 581786 + Cnot3 protein_coding retained_intron MGP_LPJ_T0080987.1 MGP_LPJ_G0031430.1 mouse_genomes_project 7 577491 594201 + Cnot3 protein_coding retained_intron MGP_LPJ_T0080988.1 MGP_LPJ_G0031430.1 mouse_genomes_project 7 577510 584041 + MGP_LPJ_P0080988 Cnot3 protein_coding protein_coding MGP_LPJ_T0080989.1 MGP_LPJ_G0031430.1 mouse_genomes_project 7 577553 594201 + MGP_LPJ_P0080989 Cnot3 protein_coding protein_coding MGP_LPJ_T0080990.1 MGP_LPJ_G0031430.1 mouse_genomes_project 7 583498 588017 + MGP_LPJ_P0080990 Cnot3 protein_coding protein_coding MGP_LPJ_T0080991.1 MGP_LPJ_G0031430.1 mouse_genomes_project 7 583760 590908 + MGP_LPJ_P0080991 Cnot3 protein_coding nonsense_mediated_decay MGP_LPJ_T0080992.1 MGP_LPJ_G0031430.1 mouse_genomes_project 7 590355 594195 + Cnot3 protein_coding retained_intron MGP_LPJ_T0080993.1 MGP_LPJ_G0031430.1 mouse_genomes_project 7 590791 593289 + MGP_LPJ_P0080993 Cnot3 protein_coding protein_coding MGP_LPJ_T0087247.1 MGP_LPJ_G0033125.1 mouse_genomes_project 7 147733376 147745975 + MGP_LPJ_P0087247 Pkp3 protein_coding protein_coding MGP_LPJ_T0087248.1 MGP_LPJ_G0033125.1 mouse_genomes_project 7 147734305 147737805 + MGP_LPJ_P0087248 Pkp3 protein_coding protein_coding MGP_LPJ_T0087249.1 MGP_LPJ_G0033125.1 mouse_genomes_project 7 147734918 147745975 + MGP_LPJ_P0087249 Pkp3 protein_coding protein_coding MGP_LPJ_T0087250.1 MGP_LPJ_G0033125.1 mouse_genomes_project 7 147734933 147738280 + MGP_LPJ_P0087250 Pkp3 protein_coding protein_coding MGP_LPJ_T0087251.1 MGP_LPJ_G0033125.1 mouse_genomes_project 7 147734938 147737854 + MGP_LPJ_P0087251 Pkp3 protein_coding nonsense_mediated_decay MGP_LPJ_T0087252.1 MGP_LPJ_G0033125.1 mouse_genomes_project 7 147743225 147744342 + Pkp3 protein_coding retained_intron MGP_LPJ_T0087253.1 MGP_LPJ_G0033125.1 mouse_genomes_project 7 147743610 147745972 + Pkp3 protein_coding retained_intron MGP_LPJ_T0087254.1 MGP_LPJ_G0033125.1 mouse_genomes_project 7 147743672 147744313 + Pkp3 protein_coding retained_intron MGP_LPJ_T0087255.1 MGP_LPJ_G0033125.1 mouse_genomes_project 7 147744875 147745381 + Pkp3 protein_coding retained_intron MGP_LPJ_T0087256.1 MGP_LPJ_G0033125.1 mouse_genomes_project 7 147745325 147745974 + MGP_LPJ_P0087256 Pkp3 protein_coding protein_coding MGP_LPJ_T0086678.1 MGP_LPJ_G0032976.1 mouse_genomes_project 7 133730652 133732948 + Zfp646 protein_coding retained_intron MGP_LPJ_T0086679.1 MGP_LPJ_G0032976.1 mouse_genomes_project 7 133731227 133734620 + MGP_LPJ_P0086679 Zfp646 protein_coding protein_coding MGP_LPJ_T0086680.1 MGP_LPJ_G0032976.1 mouse_genomes_project 7 133732132 133740428 + MGP_LPJ_P0086680 Zfp646 protein_coding protein_coding MGP_LPJ_T0086681.1 MGP_LPJ_G0032976.1 mouse_genomes_project 7 133733742 133740424 + MGP_LPJ_P0086681 Zfp646 protein_coding protein_coding MGP_LPJ_T0005220.1 MGP_LPJ_G0004443.1 mouse_genomes_project 7 33865903 33873965 + Gm12758 antisense antisense MGP_LPJ_T0005221.1 MGP_LPJ_G0004443.1 mouse_genomes_project 7 33865962 33867078 + Gm12758 antisense antisense MGP_LPJ_T0081168.1 MGP_LPJ_G0031461.1 mouse_genomes_project 7 1742578 1761886 - MGP_LPJ_P0081168 Tmem150b protein_coding protein_coding MGP_LPJ_T0081170.1 MGP_LPJ_G0031461.1 mouse_genomes_project 7 1752269 1761719 - MGP_LPJ_P0081170 Tmem150b protein_coding protein_coding MGP_LPJ_T0008875.1 MGP_LPJ_G0007169.1 mouse_genomes_project 7 40919532 40928776 + Gm28307 lincRNA lincRNA MGP_LPJ_T0015727.1 MGP_LPJ_G0013818.1 mouse_genomes_project 7 39591309 39591903 - processed_pseudogene processed_pseudogene MGP_LPJ_T0081569.1 MGP_LPJ_G0031618.1 mouse_genomes_project 7 14799399 14807985 - MGP_LPJ_P0081569 Fkrp protein_coding protein_coding MGP_LPJ_T0081570.1 MGP_LPJ_G0031618.1 mouse_genomes_project 7 14802877 14806773 - MGP_LPJ_P0081570 Fkrp protein_coding protein_coding MGP_LPJ_T0081571.1 MGP_LPJ_G0031618.1 mouse_genomes_project 7 14804385 14806945 - Fkrp protein_coding retained_intron MGP_LPJ_T0081572.1 MGP_LPJ_G0031618.1 mouse_genomes_project 7 14805999 14807985 - Fkrp protein_coding retained_intron MGP_LPJ_T0086551.1 MGP_LPJ_G0032956.1 mouse_genomes_project 7 133301988 133309863 + MGP_LPJ_P0086551 Prr14 protein_coding protein_coding MGP_LPJ_T0086552.1 MGP_LPJ_G0032956.1 mouse_genomes_project 7 133304122 133306958 + MGP_LPJ_P0086552 Prr14 protein_coding protein_coding MGP_LPJ_T0086553.1 MGP_LPJ_G0032956.1 mouse_genomes_project 7 133304132 133306821 + MGP_LPJ_P0086553 Prr14 protein_coding protein_coding MGP_LPJ_T0086554.1 MGP_LPJ_G0032956.1 mouse_genomes_project 7 133304155 133306929 + Prr14 protein_coding retained_intron MGP_LPJ_T0086555.1 MGP_LPJ_G0032956.1 mouse_genomes_project 7 133304552 133306208 + Prr14 protein_coding retained_intron MGP_LPJ_T0086556.1 MGP_LPJ_G0032956.1 mouse_genomes_project 7 133304593 133309862 + MGP_LPJ_P0086556 Prr14 protein_coding protein_coding MGP_LPJ_T0086557.1 MGP_LPJ_G0032956.1 mouse_genomes_project 7 133305004 133308316 + Prr14 protein_coding retained_intron MGP_LPJ_T0086558.1 MGP_LPJ_G0032956.1 mouse_genomes_project 7 133306726 133308374 + MGP_LPJ_P0086558 Prr14 protein_coding nonsense_mediated_decay MGP_LPJ_T0086559.1 MGP_LPJ_G0032956.1 mouse_genomes_project 7 133308604 133309861 + Prr14 protein_coding retained_intron MGP_LPJ_T0086560.1 MGP_LPJ_G0032956.1 mouse_genomes_project 7 133308622 133309859 + MGP_LPJ_P0086560 Prr14 protein_coding protein_coding MGP_LPJ_T0098052.1 MGP_LPJ_G0036333.1 mouse_genomes_project 7 85312595 85313209 + pseudogene pseudogene MGP_LPJ_T0084993.1 MGP_LPJ_G0032479.1 mouse_genomes_project 7 104738757 104751286 - MGP_LPJ_P0084993 Dnajb13 protein_coding protein_coding MGP_LPJ_T0084994.1 MGP_LPJ_G0032479.1 mouse_genomes_project 7 104738760 104749723 - Dnajb13 protein_coding processed_transcript MGP_LPJ_T0084995.1 MGP_LPJ_G0032479.1 mouse_genomes_project 7 104738818 104748098 - Dnajb13 protein_coding processed_transcript MGP_LPJ_T0083497.1 MGP_LPJ_G0032117.1 mouse_genomes_project 7 46139788 46159236 + MGP_LPJ_P0083497 Tead2 protein_coding protein_coding MGP_LPJ_T0083498.1 MGP_LPJ_G0032117.1 mouse_genomes_project 7 46139826 46144968 + Tead2 protein_coding retained_intron MGP_LPJ_T0083499.1 MGP_LPJ_G0032117.1 mouse_genomes_project 7 46139845 46142242 + Tead2 protein_coding retained_intron MGP_LPJ_T0083500.1 MGP_LPJ_G0032117.1 mouse_genomes_project 7 46139858 46149834 + MGP_LPJ_P0083500 Tead2 protein_coding protein_coding MGP_LPJ_T0083501.1 MGP_LPJ_G0032117.1 mouse_genomes_project 7 46139887 46159236 + MGP_LPJ_P0083501 Tead2 protein_coding protein_coding MGP_LPJ_T0083502.1 MGP_LPJ_G0032117.1 mouse_genomes_project 7 46140708 46143205 + MGP_LPJ_P0083502 Tead2 protein_coding protein_coding MGP_LPJ_T0083503.1 MGP_LPJ_G0032117.1 mouse_genomes_project 7 46141246 46145021 + Tead2 protein_coding retained_intron MGP_LPJ_T0083504.1 MGP_LPJ_G0032117.1 mouse_genomes_project 7 46141246 46159250 + MGP_LPJ_P0083504 Tead2 protein_coding protein_coding MGP_LPJ_T0083505.1 MGP_LPJ_G0032117.1 mouse_genomes_project 7 46142074 46147790 + Tead2 protein_coding processed_transcript MGP_LPJ_T0083506.1 MGP_LPJ_G0032117.1 mouse_genomes_project 7 46143951 46144749 + Tead2 protein_coding retained_intron MGP_LPJ_T0083507.1 MGP_LPJ_G0032117.1 mouse_genomes_project 7 46144489 46145244 + Tead2 protein_coding processed_transcript MGP_LPJ_T0083508.1 MGP_LPJ_G0032117.1 mouse_genomes_project 7 46157764 46158703 + Tead2 protein_coding processed_transcript MGP_LPJ_T0087044.1 MGP_LPJ_G0033055.1 mouse_genomes_project 7 143846741 143886565 - 9430038I01Rik protein_coding processed_transcript MGP_LPJ_T0087045.1 MGP_LPJ_G0033055.1 mouse_genomes_project 7 143846741 143886571 - MGP_LPJ_P0087045 9430038I01Rik protein_coding protein_coding MGP_LPJ_T0087046.1 MGP_LPJ_G0033055.1 mouse_genomes_project 7 143847304 143886544 - MGP_LPJ_P0087046 9430038I01Rik protein_coding protein_coding MGP_LPJ_T0087047.1 MGP_LPJ_G0033055.1 mouse_genomes_project 7 143854198 143886565 - 9430038I01Rik protein_coding retained_intron MGP_LPJ_T0087048.1 MGP_LPJ_G0033055.1 mouse_genomes_project 7 143854230 143886541 - MGP_LPJ_P0087048 9430038I01Rik protein_coding protein_coding MGP_LPJ_T0082091.1 MGP_LPJ_G0031773.1 mouse_genomes_project 7 24403182 24409320 + MGP_LPJ_P0082091 Atp5sl protein_coding protein_coding MGP_LPJ_T0082092.1 MGP_LPJ_G0031773.1 mouse_genomes_project 7 24403192 24404308 + Atp5sl protein_coding retained_intron MGP_LPJ_T0082093.1 MGP_LPJ_G0031773.1 mouse_genomes_project 7 24403261 24409317 + MGP_LPJ_P0082093 Atp5sl protein_coding protein_coding MGP_LPJ_T0082094.1 MGP_LPJ_G0031773.1 mouse_genomes_project 7 24404305 24406175 + Atp5sl protein_coding retained_intron MGP_LPJ_T0082095.1 MGP_LPJ_G0031773.1 mouse_genomes_project 7 24404664 24407851 + MGP_LPJ_P0082095 Atp5sl protein_coding nonsense_mediated_decay MGP_LPJ_T0082096.1 MGP_LPJ_G0031773.1 mouse_genomes_project 7 24404671 24405772 + Atp5sl protein_coding processed_transcript MGP_LPJ_T0082008.1 MGP_LPJ_G0031753.1 mouse_genomes_project 7 23697391 23700400 - MGP_LPJ_P0082008 Rabac1 protein_coding protein_coding MGP_LPJ_T0082009.1 MGP_LPJ_G0031753.1 mouse_genomes_project 7 23697392 23699630 - Rabac1 protein_coding retained_intron MGP_LPJ_T0082010.1 MGP_LPJ_G0031753.1 mouse_genomes_project 7 23697400 23699672 - Rabac1 protein_coding processed_transcript MGP_LPJ_T0082011.1 MGP_LPJ_G0031753.1 mouse_genomes_project 7 23697400 23700284 - MGP_LPJ_P0082011 Rabac1 protein_coding protein_coding MGP_LPJ_T0082012.1 MGP_LPJ_G0031753.1 mouse_genomes_project 7 23697401 23699873 - Rabac1 protein_coding processed_transcript MGP_LPJ_T0082013.1 MGP_LPJ_G0031753.1 mouse_genomes_project 7 23699138 23700198 - Rabac1 protein_coding retained_intron MGP_LPJ_T0084414.1 MGP_LPJ_G0032319.1 mouse_genomes_project 7 83559327 83574871 - Man2a2 protein_coding retained_intron MGP_LPJ_T0084415.1 MGP_LPJ_G0032319.1 mouse_genomes_project 7 83559327 83582766 - MGP_LPJ_P0084415 Man2a2 protein_coding protein_coding MGP_LPJ_T0084416.1 MGP_LPJ_G0032319.1 mouse_genomes_project 7 83561453 83571120 - MGP_LPJ_P0084416 Man2a2 protein_coding nonsense_mediated_decay MGP_LPJ_T0084417.1 MGP_LPJ_G0032319.1 mouse_genomes_project 7 83566326 83575081 - Man2a2 protein_coding retained_intron MGP_LPJ_T0084418.1 MGP_LPJ_G0032319.1 mouse_genomes_project 7 83570508 83571286 - Man2a2 protein_coding retained_intron MGP_LPJ_T0084419.1 MGP_LPJ_G0032319.1 mouse_genomes_project 7 83571091 83574909 - MGP_LPJ_P0084419 Man2a2 protein_coding nonsense_mediated_decay MGP_LPJ_T0084420.1 MGP_LPJ_G0032319.1 mouse_genomes_project 7 83571724 83582252 - MGP_LPJ_P0084420 Man2a2 protein_coding nonsense_mediated_decay MGP_LPJ_T0084421.1 MGP_LPJ_G0032319.1 mouse_genomes_project 7 83571889 83582517 - Man2a2 protein_coding retained_intron MGP_LPJ_T0084422.1 MGP_LPJ_G0032319.1 mouse_genomes_project 7 83574074 83575069 - Man2a2 protein_coding retained_intron MGP_LPJ_T0084423.1 MGP_LPJ_G0032319.1 mouse_genomes_project 7 83581026 83582249 - MGP_LPJ_P0084423 Man2a2 protein_coding protein_coding MGP_LPJ_T0084424.1 MGP_LPJ_G0032319.1 mouse_genomes_project 7 83581054 83582473 - MGP_LPJ_P0084424 Man2a2 protein_coding protein_coding MGP_LPJ_T0086433.1 MGP_LPJ_G0032926.1 mouse_genomes_project 7 132720344 132725191 - MGP_LPJ_P0086433 protein_coding protein_coding MGP_LPJ_T0086434.1 MGP_LPJ_G0032926.1 mouse_genomes_project 7 132722020 132725614 - MGP_LPJ_P0086434 protein_coding protein_coding MGP_LPJ_T0086435.1 MGP_LPJ_G0032926.1 mouse_genomes_project 7 132722039 132725613 - MGP_LPJ_P0086435 protein_coding protein_coding MGP_LPJ_T0015735.1 MGP_LPJ_G0013826.1 mouse_genomes_project 7 41940912 41941612 - processed_pseudogene processed_pseudogene MGP_LPJ_T0081458.1 MGP_LPJ_G0031581.1 mouse_genomes_project 7 11637024 11698176 - MGP_LPJ_P0081458 protein_coding protein_coding MGP_LPJ_T0002337.1 MGP_LPJ_G0002245.1 mouse_genomes_project 7 133646622 133649307 - TEC TEC MGP_LPJ_T0102461.1 MGP_LPJ_G0040497.1 mouse_genomes_project 7 110500336 111451445 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0081806.1 MGP_LPJ_G0031691.1 mouse_genomes_project 7 17980725 18014219 - MGP_LPJ_P0081806 Clptm1 protein_coding protein_coding MGP_LPJ_T0081341.1 MGP_LPJ_G0031540.1 mouse_genomes_project 7 9584586 9586623 + MGP_LPJ_P0081341 protein_coding protein_coding MGP_LPJ_T0002254.1 MGP_LPJ_G0002163.1 mouse_genomes_project 7 51070064 51072063 + TEC TEC MGP_LPJ_T0002247.1 MGP_LPJ_G0002156.1 mouse_genomes_project 7 44200705 44201179 + TEC TEC MGP_LPJ_T0086834.1 MGP_LPJ_G0033006.1 mouse_genomes_project 7 136144068 136251915 - MGP_LPJ_P0086834 Fgfr2 protein_coding nonsense_mediated_decay MGP_LPJ_T0086835.1 MGP_LPJ_G0033006.1 mouse_genomes_project 7 136144068 136251915 - MGP_LPJ_P0086835 Fgfr2 protein_coding protein_coding MGP_LPJ_T0086836.1 MGP_LPJ_G0033006.1 mouse_genomes_project 7 136145164 136149441 - Fgfr2 protein_coding retained_intron MGP_LPJ_T0086837.1 MGP_LPJ_G0033006.1 mouse_genomes_project 7 136145265 136251861 - MGP_LPJ_P0086837 Fgfr2 protein_coding protein_coding MGP_LPJ_T0086838.1 MGP_LPJ_G0033006.1 mouse_genomes_project 7 136145265 136251933 - MGP_LPJ_P0086838 Fgfr2 protein_coding protein_coding MGP_LPJ_T0086839.1 MGP_LPJ_G0033006.1 mouse_genomes_project 7 136145364 136153471 - Fgfr2 protein_coding retained_intron MGP_LPJ_T0086840.1 MGP_LPJ_G0033006.1 mouse_genomes_project 7 136145515 136247527 - MGP_LPJ_P0086840 Fgfr2 protein_coding protein_coding MGP_LPJ_T0086841.1 MGP_LPJ_G0033006.1 mouse_genomes_project 7 136145515 136247527 - MGP_LPJ_P0086841 Fgfr2 protein_coding protein_coding MGP_LPJ_T0086842.1 MGP_LPJ_G0033006.1 mouse_genomes_project 7 136145515 136247570 - MGP_LPJ_P0086842 Fgfr2 protein_coding protein_coding MGP_LPJ_T0086843.1 MGP_LPJ_G0033006.1 mouse_genomes_project 7 136145515 136247527 - MGP_LPJ_P0086843 Fgfr2 protein_coding protein_coding MGP_LPJ_T0086844.1 MGP_LPJ_G0033006.1 mouse_genomes_project 7 136145515 136247527 - MGP_LPJ_P0086844 Fgfr2 protein_coding protein_coding MGP_LPJ_T0086845.1 MGP_LPJ_G0033006.1 mouse_genomes_project 7 136145515 136247527 - MGP_LPJ_P0086845 Fgfr2 protein_coding protein_coding MGP_LPJ_T0086846.1 MGP_LPJ_G0033006.1 mouse_genomes_project 7 136145515 136247570 - MGP_LPJ_P0086846 Fgfr2 protein_coding protein_coding MGP_LPJ_T0086847.1 MGP_LPJ_G0033006.1 mouse_genomes_project 7 136145515 136247527 - MGP_LPJ_P0086847 Fgfr2 protein_coding protein_coding MGP_LPJ_T0086848.1 MGP_LPJ_G0033006.1 mouse_genomes_project 7 136145515 136247527 - MGP_LPJ_P0086848 Fgfr2 protein_coding protein_coding MGP_LPJ_T0086849.1 MGP_LPJ_G0033006.1 mouse_genomes_project 7 136145515 136247527 - MGP_LPJ_P0086849 Fgfr2 protein_coding protein_coding MGP_LPJ_T0086850.1 MGP_LPJ_G0033006.1 mouse_genomes_project 7 136145515 136247570 - MGP_LPJ_P0086850 Fgfr2 protein_coding protein_coding MGP_LPJ_T0086851.1 MGP_LPJ_G0033006.1 mouse_genomes_project 7 136145515 136247527 - MGP_LPJ_P0086851 Fgfr2 protein_coding protein_coding MGP_LPJ_T0086852.1 MGP_LPJ_G0033006.1 mouse_genomes_project 7 136145515 136247527 - MGP_LPJ_P0086852 Fgfr2 protein_coding protein_coding MGP_LPJ_T0086853.1 MGP_LPJ_G0033006.1 mouse_genomes_project 7 136151298 136159619 - Fgfr2 protein_coding retained_intron MGP_LPJ_T0086854.1 MGP_LPJ_G0033006.1 mouse_genomes_project 7 136159334 136165537 - Fgfr2 protein_coding retained_intron MGP_LPJ_T0086855.1 MGP_LPJ_G0033006.1 mouse_genomes_project 7 136163229 136179594 - Fgfr2 protein_coding retained_intron MGP_LPJ_T0086856.1 MGP_LPJ_G0033006.1 mouse_genomes_project 7 136167669 136179106 - Fgfr2 protein_coding retained_intron MGP_LPJ_T0086857.1 MGP_LPJ_G0033006.1 mouse_genomes_project 7 136183929 136213805 - MGP_LPJ_P0086857 Fgfr2 protein_coding nonsense_mediated_decay MGP_LPJ_T0086858.1 MGP_LPJ_G0033006.1 mouse_genomes_project 7 136226704 136249645 - Fgfr2 protein_coding retained_intron MGP_LPJ_T0002223.1 MGP_LPJ_G0002132.1 mouse_genomes_project 7 15091164 15092070 + TEC TEC MGP_LPJ_T0086436.1 MGP_LPJ_G0032927.1 mouse_genomes_project 7 132726594 132746548 + MGP_LPJ_P0086436 Sez6l2 protein_coding protein_coding MGP_LPJ_T0086437.1 MGP_LPJ_G0032927.1 mouse_genomes_project 7 132726615 132734235 + MGP_LPJ_P0086437 Sez6l2 protein_coding protein_coding MGP_LPJ_T0086438.1 MGP_LPJ_G0032927.1 mouse_genomes_project 7 132726760 132746538 + MGP_LPJ_P0086438 Sez6l2 protein_coding protein_coding MGP_LPJ_T0086439.1 MGP_LPJ_G0032927.1 mouse_genomes_project 7 132726997 132746212 + MGP_LPJ_P0086439 Sez6l2 protein_coding protein_coding MGP_LPJ_T0086440.1 MGP_LPJ_G0032927.1 mouse_genomes_project 7 132729868 132735401 + MGP_LPJ_P0086440 Sez6l2 protein_coding protein_coding MGP_LPJ_T0086441.1 MGP_LPJ_G0032927.1 mouse_genomes_project 7 132743684 132746212 + Sez6l2 protein_coding retained_intron MGP_LPJ_T0086442.1 MGP_LPJ_G0032927.1 mouse_genomes_project 7 132743910 132746546 + MGP_LPJ_P0086442 Sez6l2 protein_coding nonsense_mediated_decay MGP_LPJ_T0083867.1 MGP_LPJ_G0032215.1 mouse_genomes_project 7 53717123 53726019 - MGP_LPJ_P0083867 Svip protein_coding protein_coding MGP_LPJ_T0005201.1 MGP_LPJ_G0004428.1 mouse_genomes_project 7 26492917 26498112 - Gm15541 antisense antisense MGP_LPJ_T0101397.1 MGP_LPJ_G0039580.1 mouse_genomes_project 7 26844561 26920234 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101398.1 MGP_LPJ_G0039580.1 mouse_genomes_project 7 26844676 26917858 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0102359.1 MGP_LPJ_G0040395.1 mouse_genomes_project 7 38287551 38290293 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0083243.1 MGP_LPJ_G0032043.1 mouse_genomes_project 7 44542806 44548519 + MGP_LPJ_P0083243 Klk11 protein_coding protein_coding MGP_LPJ_T0083244.1 MGP_LPJ_G0032043.1 mouse_genomes_project 7 44545584 44548209 + Klk11 protein_coding retained_intron MGP_LPJ_T0083245.1 MGP_LPJ_G0032043.1 mouse_genomes_project 7 44545584 44548514 + MGP_LPJ_P0083245 Klk11 protein_coding protein_coding MGP_LPJ_T0083246.1 MGP_LPJ_G0032043.1 mouse_genomes_project 7 44545735 44548316 + Klk11 protein_coding processed_transcript MGP_LPJ_T0083247.1 MGP_LPJ_G0032043.1 mouse_genomes_project 7 44545735 44548316 + Klk11 protein_coding processed_transcript MGP_LPJ_T0102453.1 MGP_LPJ_G0040489.1 mouse_genomes_project 7 108546612 108547074 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0081384.1 MGP_LPJ_G0031560.1 mouse_genomes_project 7 10456155 10464108 + MGP_LPJ_P0081384 Zfp324 protein_coding protein_coding MGP_LPJ_T0081385.1 MGP_LPJ_G0031560.1 mouse_genomes_project 7 10456162 10464522 + MGP_LPJ_P0081385 Zfp324 protein_coding nonsense_mediated_decay MGP_LPJ_T0081386.1 MGP_LPJ_G0031560.1 mouse_genomes_project 7 10456184 10464085 + MGP_LPJ_P0081386 Zfp324 protein_coding nonsense_mediated_decay MGP_LPJ_T0086947.1 MGP_LPJ_G0033032.1 mouse_genomes_project 7 139052399 139080587 - MGP_LPJ_P0086947 Mettl10 protein_coding protein_coding MGP_LPJ_T0086948.1 MGP_LPJ_G0033032.1 mouse_genomes_project 7 139052630 139080530 - MGP_LPJ_P0086948 Mettl10 protein_coding protein_coding MGP_LPJ_T0086949.1 MGP_LPJ_G0033032.1 mouse_genomes_project 7 139052802 139080293 - Mettl10 protein_coding processed_transcript MGP_LPJ_T0086950.1 MGP_LPJ_G0033032.1 mouse_genomes_project 7 139056459 139080529 - MGP_LPJ_P0086950 Mettl10 protein_coding nonsense_mediated_decay MGP_LPJ_T0086951.1 MGP_LPJ_G0033032.1 mouse_genomes_project 7 139056467 139080499 - MGP_LPJ_P0086951 Mettl10 protein_coding nonsense_mediated_decay MGP_LPJ_T0086952.1 MGP_LPJ_G0033032.1 mouse_genomes_project 7 139078021 139080553 - Mettl10 protein_coding processed_transcript MGP_LPJ_T0005333.1 MGP_LPJ_G0004524.1 mouse_genomes_project 7 147472739 147481205 - C330022C24Rik antisense antisense MGP_LPJ_T0015816.1 MGP_LPJ_G0013907.1 mouse_genomes_project 7 100415682 100416154 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008899.1 MGP_LPJ_G0007187.1 mouse_genomes_project 7 68006463 68060037 - lincRNA lincRNA MGP_LPJ_T0015644.1 MGP_LPJ_G0013735.1 mouse_genomes_project 7 1314860 1315225 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015776.1 MGP_LPJ_G0013867.1 mouse_genomes_project 7 67818253 67818572 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009012.1 MGP_LPJ_G0007260.1 mouse_genomes_project 7 120224624 120257779 + Gm44944 lincRNA lincRNA MGP_LPJ_T0009013.1 MGP_LPJ_G0007260.1 mouse_genomes_project 7 120256353 120258068 + Gm44944 lincRNA lincRNA MGP_LPJ_T0009014.1 MGP_LPJ_G0007260.1 mouse_genomes_project 7 120257792 120258097 + Gm44944 lincRNA lincRNA MGP_LPJ_T0002336.1 MGP_LPJ_G0002244.1 mouse_genomes_project 7 133496034 133497207 - TEC TEC MGP_LPJ_T0102287.1 MGP_LPJ_G0040324.1 mouse_genomes_project 7 889490 900430 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0009024.1 MGP_LPJ_G0007269.1 mouse_genomes_project 7 130560184 130566659 + Gm45092 lincRNA lincRNA MGP_LPJ_T0002280.1 MGP_LPJ_G0002189.1 mouse_genomes_project 7 76538061 76541157 - TEC TEC MGP_LPJ_T0002281.1 MGP_LPJ_G0002189.1 mouse_genomes_project 7 76539025 76541050 - TEC TEC MGP_LPJ_T0084944.1 MGP_LPJ_G0032469.1 mouse_genomes_project 7 104220335 104249086 + MGP_LPJ_P0084944 Chrdl2 protein_coding protein_coding MGP_LPJ_T0084945.1 MGP_LPJ_G0032469.1 mouse_genomes_project 7 104223843 104249088 + MGP_LPJ_P0084945 Chrdl2 protein_coding protein_coding MGP_LPJ_T0084946.1 MGP_LPJ_G0032469.1 mouse_genomes_project 7 104236421 104249086 + MGP_LPJ_P0084946 Chrdl2 protein_coding protein_coding MGP_LPJ_T0087148.1 MGP_LPJ_G0033080.1 mouse_genomes_project 7 146725327 146743517 - MGP_LPJ_P0087148 Echs1 protein_coding protein_coding MGP_LPJ_T0087149.1 MGP_LPJ_G0033080.1 mouse_genomes_project 7 146725335 146743430 - Echs1 protein_coding retained_intron MGP_LPJ_T0087150.1 MGP_LPJ_G0033080.1 mouse_genomes_project 7 146725701 146733071 - MGP_LPJ_P0087150 Echs1 protein_coding protein_coding MGP_LPJ_T0087151.1 MGP_LPJ_G0033080.1 mouse_genomes_project 7 146728829 146743456 - Echs1 protein_coding retained_intron MGP_LPJ_T0087152.1 MGP_LPJ_G0033080.1 mouse_genomes_project 7 146728829 146743456 - Echs1 protein_coding retained_intron MGP_LPJ_T0087153.1 MGP_LPJ_G0033080.1 mouse_genomes_project 7 146731803 146743448 - Echs1 protein_coding processed_transcript MGP_LPJ_T0085220.1 MGP_LPJ_G0032528.1 mouse_genomes_project 7 107037277 107038225 + MGP_LPJ_P0085220 Olfr555 protein_coding protein_coding MGP_LPJ_T0085920.1 MGP_LPJ_G0032825.1 mouse_genomes_project 7 124506089 124545905 - MGP_LPJ_P0085920 Gpr139 protein_coding protein_coding MGP_LPJ_T0085893.1 MGP_LPJ_G0032821.1 mouse_genomes_project 7 124068526 124177605 + MGP_LPJ_P0085893 9030624J02Rik protein_coding protein_coding MGP_LPJ_T0085894.1 MGP_LPJ_G0032821.1 mouse_genomes_project 7 124068986 124113816 + 9030624J02Rik protein_coding processed_transcript MGP_LPJ_T0085895.1 MGP_LPJ_G0032821.1 mouse_genomes_project 7 124069001 124091208 + MGP_LPJ_P0085895 9030624J02Rik protein_coding protein_coding MGP_LPJ_T0085896.1 MGP_LPJ_G0032821.1 mouse_genomes_project 7 124069001 124176119 + MGP_LPJ_P0085896 9030624J02Rik protein_coding protein_coding MGP_LPJ_T0085897.1 MGP_LPJ_G0032821.1 mouse_genomes_project 7 124069001 124176129 + MGP_LPJ_P0085897 9030624J02Rik protein_coding protein_coding MGP_LPJ_T0085898.1 MGP_LPJ_G0032821.1 mouse_genomes_project 7 124069003 124076326 + 9030624J02Rik protein_coding retained_intron MGP_LPJ_T0085899.1 MGP_LPJ_G0032821.1 mouse_genomes_project 7 124076557 124095481 + 9030624J02Rik protein_coding retained_intron MGP_LPJ_T0085900.1 MGP_LPJ_G0032821.1 mouse_genomes_project 7 124080773 124082330 + 9030624J02Rik protein_coding retained_intron MGP_LPJ_T0085901.1 MGP_LPJ_G0032821.1 mouse_genomes_project 7 124093171 124176127 + MGP_LPJ_P0085901 9030624J02Rik protein_coding protein_coding MGP_LPJ_T0085902.1 MGP_LPJ_G0032821.1 mouse_genomes_project 7 124124634 124158588 + MGP_LPJ_P0085902 9030624J02Rik protein_coding protein_coding MGP_LPJ_T0085903.1 MGP_LPJ_G0032821.1 mouse_genomes_project 7 124137009 124167919 + 9030624J02Rik protein_coding retained_intron MGP_LPJ_T0085904.1 MGP_LPJ_G0032821.1 mouse_genomes_project 7 124139629 124146098 + 9030624J02Rik protein_coding retained_intron MGP_LPJ_T0085905.1 MGP_LPJ_G0032821.1 mouse_genomes_project 7 124154023 124158812 + 9030624J02Rik protein_coding retained_intron MGP_LPJ_T0085906.1 MGP_LPJ_G0032821.1 mouse_genomes_project 7 124156956 124175939 + 9030624J02Rik protein_coding processed_transcript MGP_LPJ_T0015722.1 MGP_LPJ_G0013813.1 mouse_genomes_project 7 36011649 36012624 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102363.1 MGP_LPJ_G0040399.1 mouse_genomes_project 7 41044302 41057377 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0084410.1 MGP_LPJ_G0032318.1 mouse_genomes_project 7 83554648 83556876 + MGP_LPJ_P0084410 Hddc3 protein_coding protein_coding MGP_LPJ_T0084411.1 MGP_LPJ_G0032318.1 mouse_genomes_project 7 83554660 83555524 + MGP_LPJ_P0084411 Hddc3 protein_coding protein_coding MGP_LPJ_T0084412.1 MGP_LPJ_G0032318.1 mouse_genomes_project 7 83555110 83555926 + MGP_LPJ_P0084412 Hddc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0084413.1 MGP_LPJ_G0032318.1 mouse_genomes_project 7 83555323 83560756 + MGP_LPJ_P0084413 Hddc3 protein_coding protein_coding MGP_LPJ_T0081372.1 MGP_LPJ_G0031557.1 mouse_genomes_project 7 10382743 10398515 + MGP_LPJ_P0081372 Zscan22 protein_coding protein_coding MGP_LPJ_T0081373.1 MGP_LPJ_G0031557.1 mouse_genomes_project 7 10382764 10399359 + MGP_LPJ_P0081373 Zscan22 protein_coding protein_coding MGP_LPJ_T0081374.1 MGP_LPJ_G0031557.1 mouse_genomes_project 7 10382769 10397813 + MGP_LPJ_P0081374 Zscan22 protein_coding protein_coding MGP_LPJ_T0081375.1 MGP_LPJ_G0031557.1 mouse_genomes_project 7 10382795 10398518 + MGP_LPJ_P0081375 Zscan22 protein_coding protein_coding MGP_LPJ_T0082675.1 MGP_LPJ_G0031920.1 mouse_genomes_project 7 29724250 29726383 - MGP_LPJ_P0082675 Hcst protein_coding protein_coding MGP_LPJ_T0082555.1 MGP_LPJ_G0031889.1 mouse_genomes_project 7 29042458 29055384 + MGP_LPJ_P0082555 Zfp30 protein_coding protein_coding MGP_LPJ_T0082556.1 MGP_LPJ_G0031889.1 mouse_genomes_project 7 29042483 29052594 + Zfp30 protein_coding retained_intron MGP_LPJ_T0082557.1 MGP_LPJ_G0031889.1 mouse_genomes_project 7 29042655 29054408 + MGP_LPJ_P0082557 Zfp30 protein_coding protein_coding MGP_LPJ_T0086443.1 MGP_LPJ_G0032928.1 mouse_genomes_project 7 132752377 132757091 + MGP_LPJ_P0086443 Cdipt protein_coding nonsense_mediated_decay MGP_LPJ_T0086444.1 MGP_LPJ_G0032928.1 mouse_genomes_project 7 132752399 132757093 + MGP_LPJ_P0086444 Cdipt protein_coding nonsense_mediated_decay MGP_LPJ_T0086445.1 MGP_LPJ_G0032928.1 mouse_genomes_project 7 132752529 132756243 + MGP_LPJ_P0086445 Cdipt protein_coding protein_coding MGP_LPJ_T0086446.1 MGP_LPJ_G0032928.1 mouse_genomes_project 7 132752671 132756629 + MGP_LPJ_P0086446 Cdipt protein_coding protein_coding MGP_LPJ_T0086447.1 MGP_LPJ_G0032928.1 mouse_genomes_project 7 132752705 132757097 + MGP_LPJ_P0086447 Cdipt protein_coding protein_coding MGP_LPJ_T0086448.1 MGP_LPJ_G0032928.1 mouse_genomes_project 7 132754824 132756067 + Cdipt protein_coding retained_intron MGP_LPJ_T0102323.1 MGP_LPJ_G0040360.1 mouse_genomes_project 7 12158096 12158616 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0083602.1 MGP_LPJ_G0032137.1 mouse_genomes_project 7 46540614 46561491 + MGP_LPJ_P0083602 Hsd17b14 protein_coding protein_coding MGP_LPJ_T0083603.1 MGP_LPJ_G0032137.1 mouse_genomes_project 7 46540658 46561921 + MGP_LPJ_P0083603 Hsd17b14 protein_coding protein_coding MGP_LPJ_T0083604.1 MGP_LPJ_G0032137.1 mouse_genomes_project 7 46542267 46561488 + Hsd17b14 protein_coding retained_intron MGP_LPJ_T0083605.1 MGP_LPJ_G0032137.1 mouse_genomes_project 7 46545303 46560175 + Hsd17b14 protein_coding retained_intron MGP_LPJ_T0083606.1 MGP_LPJ_G0032137.1 mouse_genomes_project 7 46553965 46560346 + Hsd17b14 protein_coding processed_transcript MGP_LPJ_T0083607.1 MGP_LPJ_G0032137.1 mouse_genomes_project 7 46553976 46560861 + Hsd17b14 protein_coding processed_transcript MGP_LPJ_T0083608.1 MGP_LPJ_G0032137.1 mouse_genomes_project 7 46554909 46560363 + Hsd17b14 protein_coding processed_transcript MGP_LPJ_T0015696.1 MGP_LPJ_G0013787.1 mouse_genomes_project 7 24600499 24600787 + processed_pseudogene processed_pseudogene MGP_LPJ_T0085400.1 MGP_LPJ_G0032665.1 mouse_genomes_project 7 110074282 110121610 + MGP_LPJ_P0085400 Cckbr protein_coding protein_coding MGP_LPJ_T0085401.1 MGP_LPJ_G0032665.1 mouse_genomes_project 7 110074285 110085760 + MGP_LPJ_P0085401 Cckbr protein_coding protein_coding MGP_LPJ_T0081460.1 MGP_LPJ_G0031583.1 mouse_genomes_project 7 11805944 11839975 - MGP_LPJ_P0081460 Sult2a6 protein_coding protein_coding MGP_LPJ_T0081461.1 MGP_LPJ_G0031583.1 mouse_genomes_project 7 11805952 11839975 - MGP_LPJ_P0081461 Sult2a6 protein_coding protein_coding MGP_LPJ_T0099700.1 MGP_LPJ_G0037963.1 mouse_genomes_project 7 27201762 27201868 + Gm24356 snRNA snRNA MGP_LPJ_T0015684.1 MGP_LPJ_G0013775.1 mouse_genomes_project 7 18337342 18338086 - processed_pseudogene processed_pseudogene MGP_LPJ_T0087072.1 MGP_LPJ_G0033062.1 mouse_genomes_project 7 145631973 145648677 + MGP_LPJ_P0087072 Dpysl4 protein_coding protein_coding MGP_LPJ_T0087073.1 MGP_LPJ_G0033062.1 mouse_genomes_project 7 145631974 145640438 + Dpysl4 protein_coding processed_transcript MGP_LPJ_T0087074.1 MGP_LPJ_G0033062.1 mouse_genomes_project 7 145631999 145647768 + Dpysl4 protein_coding retained_intron MGP_LPJ_T0087075.1 MGP_LPJ_G0033062.1 mouse_genomes_project 7 145632000 145647756 + Dpysl4 protein_coding retained_intron MGP_LPJ_T0087076.1 MGP_LPJ_G0033062.1 mouse_genomes_project 7 145634337 145640404 + MGP_LPJ_P0087076 Dpysl4 protein_coding protein_coding MGP_LPJ_T0087077.1 MGP_LPJ_G0033062.1 mouse_genomes_project 7 145635219 145647750 + MGP_LPJ_P0087077 Dpysl4 protein_coding protein_coding MGP_LPJ_T0100986.1 MGP_LPJ_G0039249.1 mouse_genomes_project 7 114478895 114479027 + Snora3 snoRNA snoRNA MGP_LPJ_T0082359.1 MGP_LPJ_G0031844.1 mouse_genomes_project 7 27455994 27458039 + MGP_LPJ_P0082359 Rps16 protein_coding protein_coding MGP_LPJ_T0082360.1 MGP_LPJ_G0031844.1 mouse_genomes_project 7 27456105 27458039 + Rps16 protein_coding retained_intron MGP_LPJ_T0082361.1 MGP_LPJ_G0031844.1 mouse_genomes_project 7 27456266 27458039 + Rps16 protein_coding processed_transcript MGP_LPJ_T0085375.1 MGP_LPJ_G0032647.1 mouse_genomes_project 7 109602788 109603865 - MGP_LPJ_P0085375 Olfr675 protein_coding protein_coding MGP_LPJ_T0101600.1 MGP_LPJ_G0039681.1 mouse_genomes_project 7 14628873 14638133 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101601.1 MGP_LPJ_G0039681.1 mouse_genomes_project 7 14629231 14631902 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0085374.1 MGP_LPJ_G0032646.1 mouse_genomes_project 7 109526563 109527502 - MGP_LPJ_P0085374 Olfr672 protein_coding protein_coding MGP_LPJ_T0084815.1 MGP_LPJ_G0032436.1 mouse_genomes_project 7 101606554 101609646 + Rsf1 protein_coding retained_intron MGP_LPJ_T0084816.1 MGP_LPJ_G0032436.1 mouse_genomes_project 7 101606562 101714847 + Rsf1 protein_coding retained_intron MGP_LPJ_T0084817.1 MGP_LPJ_G0032436.1 mouse_genomes_project 7 101606562 101721183 + MGP_LPJ_P0084817 Rsf1 protein_coding protein_coding MGP_LPJ_T0084818.1 MGP_LPJ_G0032436.1 mouse_genomes_project 7 101606572 101666434 + MGP_LPJ_P0084818 Rsf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0084819.1 MGP_LPJ_G0032436.1 mouse_genomes_project 7 101684158 101687793 + Rsf1 protein_coding retained_intron MGP_LPJ_T0084820.1 MGP_LPJ_G0032436.1 mouse_genomes_project 7 101689430 101715035 + MGP_LPJ_P0084820 Rsf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0084821.1 MGP_LPJ_G0032436.1 mouse_genomes_project 7 101696372 101702995 + Rsf1 protein_coding retained_intron MGP_LPJ_T0084822.1 MGP_LPJ_G0032436.1 mouse_genomes_project 7 101696727 101709222 + MGP_LPJ_P0084822 Rsf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0010877.1 MGP_LPJ_G0008995.1 mouse_genomes_project 7 29393037 29393133 - Gm23368 miRNA miRNA MGP_LPJ_T0085286.1 MGP_LPJ_G0032589.1 mouse_genomes_project 7 108276810 108277958 - MGP_LPJ_P0085286 Olfr68 protein_coding protein_coding MGP_LPJ_T0086056.1 MGP_LPJ_G0032867.1 mouse_genomes_project 7 127598896 127602591 - Ndufab1 protein_coding retained_intron MGP_LPJ_T0086057.1 MGP_LPJ_G0032867.1 mouse_genomes_project 7 127601621 127603896 - Ndufab1 protein_coding retained_intron MGP_LPJ_T0086058.1 MGP_LPJ_G0032867.1 mouse_genomes_project 7 127601627 127612703 - MGP_LPJ_P0086058 Ndufab1 protein_coding protein_coding MGP_LPJ_T0086059.1 MGP_LPJ_G0032867.1 mouse_genomes_project 7 127601636 127604787 - Ndufab1 protein_coding retained_intron MGP_LPJ_T0086060.1 MGP_LPJ_G0032867.1 mouse_genomes_project 7 127602329 127612573 - MGP_LPJ_P0086060 Ndufab1 protein_coding protein_coding MGP_LPJ_T0086061.1 MGP_LPJ_G0032867.1 mouse_genomes_project 7 127605036 127612205 - Ndufab1 protein_coding processed_transcript MGP_LPJ_T0086062.1 MGP_LPJ_G0032867.1 mouse_genomes_project 7 127607466 127612666 - Ndufab1 protein_coding retained_intron MGP_LPJ_T0010947.1 MGP_LPJ_G0009065.1 mouse_genomes_project 7 134383927 134384052 - Gm24365 miRNA miRNA MGP_LPJ_T0102445.1 MGP_LPJ_G0040481.1 mouse_genomes_project 7 107915788 107916755 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0086761.1 MGP_LPJ_G0032995.1 mouse_genomes_project 7 134137353 134141843 + MGP_LPJ_P0086761 protein_coding protein_coding MGP_LPJ_T0085537.1 MGP_LPJ_G0032714.1 mouse_genomes_project 7 112721404 112740859 - MGP_LPJ_P0085537 Ovch2 protein_coding protein_coding MGP_LPJ_T0005255.1 MGP_LPJ_G0004468.1 mouse_genomes_project 7 81312126 81313250 + 4921513I08Rik antisense antisense MGP_LPJ_T0085305.1 MGP_LPJ_G0032606.1 mouse_genomes_project 7 108577466 108578411 - MGP_LPJ_P0085305 Olfr640 protein_coding protein_coding MGP_LPJ_T0087429.1 MGP_LPJ_G0033155.1 mouse_genomes_project 7 148327106 148352376 - MGP_LPJ_P0087429 protein_coding protein_coding MGP_LPJ_T0087430.1 MGP_LPJ_G0033155.1 mouse_genomes_project 7 148327626 148352376 - MGP_LPJ_P0087430 protein_coding protein_coding MGP_LPJ_T0087431.1 MGP_LPJ_G0033155.1 mouse_genomes_project 7 148327703 148352365 - MGP_LPJ_P0087431 protein_coding protein_coding MGP_LPJ_T0083491.1 MGP_LPJ_G0032112.1 mouse_genomes_project 7 46084463 46096622 + MGP_LPJ_P0083491 Slc17a7 protein_coding protein_coding MGP_LPJ_T0086484.1 MGP_LPJ_G0032938.1 mouse_genomes_project 7 132896325 132911285 - MGP_LPJ_P0086484 Qprt protein_coding protein_coding MGP_LPJ_T0086485.1 MGP_LPJ_G0032938.1 mouse_genomes_project 7 132898206 132911100 - Qprt protein_coding processed_transcript MGP_LPJ_T0086486.1 MGP_LPJ_G0032938.1 mouse_genomes_project 7 132904848 132911077 - Qprt protein_coding processed_transcript MGP_LPJ_T0083525.1 MGP_LPJ_G0032121.1 mouse_genomes_project 7 46287735 46293405 + MGP_LPJ_P0083525 Hrc protein_coding protein_coding MGP_LPJ_T0082451.1 MGP_LPJ_G0031866.1 mouse_genomes_project 7 28005283 28014309 + MGP_LPJ_P0082451 protein_coding unknown_likely_coding MGP_LPJ_T0082452.1 MGP_LPJ_G0031866.1 mouse_genomes_project 7 28006848 28008539 + protein_coding retained_intron MGP_LPJ_T0082453.1 MGP_LPJ_G0031866.1 mouse_genomes_project 7 28006879 28010750 + protein_coding retained_intron MGP_LPJ_T0082454.1 MGP_LPJ_G0031866.1 mouse_genomes_project 7 28007215 28013890 + MGP_LPJ_P0082454 protein_coding nonsense_mediated_decay MGP_LPJ_T0082455.1 MGP_LPJ_G0031866.1 mouse_genomes_project 7 28008621 28014297 + protein_coding retained_intron MGP_LPJ_T0082456.1 MGP_LPJ_G0031866.1 mouse_genomes_project 7 28013681 28014299 + protein_coding retained_intron MGP_LPJ_T0005293.1 MGP_LPJ_G0004493.1 mouse_genomes_project 7 108832944 108842271 + Gm15133 antisense antisense MGP_LPJ_T0005294.1 MGP_LPJ_G0004493.1 mouse_genomes_project 7 108832945 108842442 + Gm15133 antisense antisense MGP_LPJ_T0086376.1 MGP_LPJ_G0032918.1 mouse_genomes_project 7 132566393 132601199 + MGP_LPJ_P0086376 Fam57b protein_coding protein_coding MGP_LPJ_T0086377.1 MGP_LPJ_G0032918.1 mouse_genomes_project 7 132582524 132591691 + Fam57b protein_coding processed_transcript MGP_LPJ_T0086378.1 MGP_LPJ_G0032918.1 mouse_genomes_project 7 132583877 132587068 + Fam57b protein_coding processed_transcript MGP_LPJ_T0086379.1 MGP_LPJ_G0032918.1 mouse_genomes_project 7 132586722 132598515 + MGP_LPJ_P0086379 Fam57b protein_coding protein_coding MGP_LPJ_T0086380.1 MGP_LPJ_G0032918.1 mouse_genomes_project 7 132586723 132601203 + MGP_LPJ_P0086380 Fam57b protein_coding protein_coding MGP_LPJ_T0086381.1 MGP_LPJ_G0032918.1 mouse_genomes_project 7 132595071 132601201 + MGP_LPJ_P0086381 Fam57b protein_coding protein_coding MGP_LPJ_T0086281.1 MGP_LPJ_G0032904.1 mouse_genomes_project 7 132333016 132337187 + MGP_LPJ_P0086281 Apobr protein_coding protein_coding MGP_LPJ_T0086282.1 MGP_LPJ_G0032904.1 mouse_genomes_project 7 132333065 132336026 + MGP_LPJ_P0086282 Apobr protein_coding nonsense_mediated_decay MGP_LPJ_T0086283.1 MGP_LPJ_G0032904.1 mouse_genomes_project 7 132333066 132336445 + MGP_LPJ_P0086283 Apobr protein_coding protein_coding MGP_LPJ_T0086284.1 MGP_LPJ_G0032904.1 mouse_genomes_project 7 132335154 132336520 + MGP_LPJ_P0086284 Apobr protein_coding protein_coding MGP_LPJ_T0086285.1 MGP_LPJ_G0032904.1 mouse_genomes_project 7 132335748 132336400 + MGP_LPJ_P0086285 Apobr protein_coding protein_coding MGP_LPJ_T0085508.1 MGP_LPJ_G0032692.1 mouse_genomes_project 7 111840390 111841341 - MGP_LPJ_P0085508 protein_coding protein_coding MGP_LPJ_T0084909.1 MGP_LPJ_G0032456.1 mouse_genomes_project 7 103458586 103466288 - MGP_LPJ_P0084909 Serpinh1 protein_coding unknown_likely_coding MGP_LPJ_T0081448.1 MGP_LPJ_G0031575.1 mouse_genomes_project 7 10916817 10927575 + MGP_LPJ_P0081448 Cabp5 protein_coding protein_coding MGP_LPJ_T0081449.1 MGP_LPJ_G0031575.1 mouse_genomes_project 7 10916980 10925000 + MGP_LPJ_P0081449 Cabp5 protein_coding protein_coding MGP_LPJ_T0081450.1 MGP_LPJ_G0031575.1 mouse_genomes_project 7 10916993 10924251 + MGP_LPJ_P0081450 Cabp5 protein_coding nonsense_mediated_decay MGP_LPJ_T0102335.1 MGP_LPJ_G0040372.1 mouse_genomes_project 7 22362748 22363638 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0082069.1 MGP_LPJ_G0031765.1 mouse_genomes_project 7 24067247 24069955 + Tmem145 protein_coding retained_intron MGP_LPJ_T0082070.1 MGP_LPJ_G0031765.1 mouse_genomes_project 7 24067249 24076933 + MGP_LPJ_P0082070 Tmem145 protein_coding protein_coding MGP_LPJ_T0082071.1 MGP_LPJ_G0031765.1 mouse_genomes_project 7 24067249 24076920 + MGP_LPJ_P0082071 Tmem145 protein_coding protein_coding MGP_LPJ_T0082072.1 MGP_LPJ_G0031765.1 mouse_genomes_project 7 24075777 24076930 + Tmem145 protein_coding retained_intron MGP_LPJ_T0100997.1 MGP_LPJ_G0039260.1 mouse_genomes_project 7 126500728 126500865 - Gm27991 snoRNA snoRNA MGP_LPJ_T0085206.1 MGP_LPJ_G0032515.1 mouse_genomes_project 7 106622777 106799298 + MGP_LPJ_P0085206 Stim1 protein_coding protein_coding MGP_LPJ_T0081320.1 MGP_LPJ_G0031523.1 mouse_genomes_project 7 4512829 4530045 - MGP_LPJ_P0081320 Clcn4 protein_coding protein_coding MGP_LPJ_T0102436.1 MGP_LPJ_G0040472.1 mouse_genomes_project 7 90099785 90100711 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0083857.1 MGP_LPJ_G0032212.1 mouse_genomes_project 7 53328215 53377499 + MGP_LPJ_P0083857 Slc17a6 protein_coding protein_coding MGP_LPJ_T0002278.1 MGP_LPJ_G0002187.1 mouse_genomes_project 7 76282893 76284140 - TEC TEC MGP_LPJ_T0015838.1 MGP_LPJ_G0013929.1 mouse_genomes_project 7 110543791 110545200 + processed_pseudogene processed_pseudogene MGP_LPJ_T0084657.1 MGP_LPJ_G0032397.1 mouse_genomes_project 7 90841638 90902932 + MGP_LPJ_P0084657 Nox4 protein_coding protein_coding MGP_LPJ_T0084658.1 MGP_LPJ_G0032397.1 mouse_genomes_project 7 90843185 90906277 + Nox4 protein_coding retained_intron MGP_LPJ_T0084659.1 MGP_LPJ_G0032397.1 mouse_genomes_project 7 90843185 90885547 + Nox4 protein_coding processed_transcript MGP_LPJ_T0084660.1 MGP_LPJ_G0032397.1 mouse_genomes_project 7 90843185 90993808 + MGP_LPJ_P0084660 Nox4 protein_coding protein_coding MGP_LPJ_T0084661.1 MGP_LPJ_G0032397.1 mouse_genomes_project 7 90843185 90996656 + MGP_LPJ_P0084661 Nox4 protein_coding nonsense_mediated_decay MGP_LPJ_T0084662.1 MGP_LPJ_G0032397.1 mouse_genomes_project 7 90843185 90990300 + MGP_LPJ_P0084662 Nox4 protein_coding nonsense_mediated_decay MGP_LPJ_T0084663.1 MGP_LPJ_G0032397.1 mouse_genomes_project 7 90843185 90996656 + MGP_LPJ_P0084663 Nox4 protein_coding protein_coding MGP_LPJ_T0084664.1 MGP_LPJ_G0032397.1 mouse_genomes_project 7 90843348 90996285 + MGP_LPJ_P0084664 Nox4 protein_coding nonsense_mediated_decay MGP_LPJ_T0102354.1 MGP_LPJ_G0040390.1 mouse_genomes_project 7 33437227 33438205 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0085217.1 MGP_LPJ_G0032525.1 mouse_genomes_project 7 106981552 106982506 + MGP_LPJ_P0085217 Olfr552 protein_coding protein_coding MGP_LPJ_T0015701.1 MGP_LPJ_G0013792.1 mouse_genomes_project 7 25676160 25677871 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008996.1 MGP_LPJ_G0007252.1 mouse_genomes_project 7 112176812 112226704 + Platr28 lincRNA lincRNA MGP_LPJ_T0086394.1 MGP_LPJ_G0032921.1 mouse_genomes_project 7 132623525 132633837 - MGP_LPJ_P0086394 protein_coding protein_coding MGP_LPJ_T0086395.1 MGP_LPJ_G0032921.1 mouse_genomes_project 7 132624145 132634029 - MGP_LPJ_P0086395 protein_coding protein_coding MGP_LPJ_T0086396.1 MGP_LPJ_G0032921.1 mouse_genomes_project 7 132624998 132634943 - protein_coding retained_intron MGP_LPJ_T0086397.1 MGP_LPJ_G0032921.1 mouse_genomes_project 7 132625145 132634426 - MGP_LPJ_P0086397 protein_coding protein_coding MGP_LPJ_T0086398.1 MGP_LPJ_G0032921.1 mouse_genomes_project 7 132625247 132634298 - protein_coding processed_transcript MGP_LPJ_T0086399.1 MGP_LPJ_G0032921.1 mouse_genomes_project 7 132625335 132634351 - MGP_LPJ_P0086399 protein_coding protein_coding MGP_LPJ_T0086400.1 MGP_LPJ_G0032921.1 mouse_genomes_project 7 132625383 132630296 - MGP_LPJ_P0086400 protein_coding protein_coding MGP_LPJ_T0086401.1 MGP_LPJ_G0032921.1 mouse_genomes_project 7 132625460 132634927 - MGP_LPJ_P0086401 protein_coding protein_coding MGP_LPJ_T0086402.1 MGP_LPJ_G0032921.1 mouse_genomes_project 7 132625495 132634349 - MGP_LPJ_P0086402 protein_coding nonsense_mediated_decay MGP_LPJ_T0086403.1 MGP_LPJ_G0032921.1 mouse_genomes_project 7 132628766 132634435 - protein_coding retained_intron MGP_LPJ_T0086404.1 MGP_LPJ_G0032921.1 mouse_genomes_project 7 132630241 132634357 - protein_coding processed_transcript MGP_LPJ_T0086405.1 MGP_LPJ_G0032921.1 mouse_genomes_project 7 132630264 132634410 - MGP_LPJ_P0086405 protein_coding protein_coding MGP_LPJ_T0086406.1 MGP_LPJ_G0032921.1 mouse_genomes_project 7 132630279 132634214 - MGP_LPJ_P0086406 protein_coding protein_coding MGP_LPJ_T0086407.1 MGP_LPJ_G0032921.1 mouse_genomes_project 7 132633805 132634414 - protein_coding processed_transcript MGP_LPJ_T0002307.1 MGP_LPJ_G0002215.1 mouse_genomes_project 7 83295325 83297166 - TEC TEC MGP_LPJ_T0087118.1 MGP_LPJ_G0033072.1 mouse_genomes_project 7 146601008 146610417 - 6430531B16Rik protein_coding retained_intron MGP_LPJ_T0087119.1 MGP_LPJ_G0033072.1 mouse_genomes_project 7 146601008 146610449 - MGP_LPJ_P0087119 6430531B16Rik protein_coding protein_coding MGP_LPJ_T0087120.1 MGP_LPJ_G0033072.1 mouse_genomes_project 7 146607189 146610417 - MGP_LPJ_P0087120 6430531B16Rik protein_coding protein_coding MGP_LPJ_T0084937.1 MGP_LPJ_G0032463.1 mouse_genomes_project 7 103896321 103897404 + MGP_LPJ_P0084937 Olfr521 protein_coding protein_coding MGP_LPJ_T0086220.1 MGP_LPJ_G0032894.1 mouse_genomes_project 7 132111067 132131989 - MGP_LPJ_P0086220 Nfatc2ip protein_coding protein_coding MGP_LPJ_T0086221.1 MGP_LPJ_G0032894.1 mouse_genomes_project 7 132114323 132124496 - MGP_LPJ_P0086221 Nfatc2ip protein_coding protein_coding MGP_LPJ_T0015639.1 MGP_LPJ_G0013730.1 mouse_genomes_project 7 972931 973763 - processed_pseudogene processed_pseudogene MGP_LPJ_T0086499.1 MGP_LPJ_G0032941.1 mouse_genomes_project 7 132994796 133005665 - MGP_LPJ_P0086499 Tbc1d10b protein_coding protein_coding MGP_LPJ_T0086500.1 MGP_LPJ_G0032941.1 mouse_genomes_project 7 132996059 133001091 - MGP_LPJ_P0086500 Tbc1d10b protein_coding protein_coding MGP_LPJ_T0086501.1 MGP_LPJ_G0032941.1 mouse_genomes_project 7 132996394 132997323 - Tbc1d10b protein_coding retained_intron MGP_LPJ_T0086502.1 MGP_LPJ_G0032941.1 mouse_genomes_project 7 132996699 133004944 - Tbc1d10b protein_coding processed_transcript MGP_LPJ_T0086503.1 MGP_LPJ_G0032941.1 mouse_genomes_project 7 132997159 132998292 - Tbc1d10b protein_coding retained_intron MGP_LPJ_T0086504.1 MGP_LPJ_G0032941.1 mouse_genomes_project 7 132997204 133000991 - Tbc1d10b protein_coding retained_intron MGP_LPJ_T0086505.1 MGP_LPJ_G0032941.1 mouse_genomes_project 7 132997590 133001032 - Tbc1d10b protein_coding retained_intron MGP_LPJ_T0086506.1 MGP_LPJ_G0032941.1 mouse_genomes_project 7 133000290 133000812 - Tbc1d10b protein_coding retained_intron MGP_LPJ_T0085204.1 MGP_LPJ_G0032514.1 mouse_genomes_project 7 106590246 106601232 - MGP_LPJ_P0085204 Rhog protein_coding protein_coding MGP_LPJ_T0085205.1 MGP_LPJ_G0032514.1 mouse_genomes_project 7 106590246 106601197 - MGP_LPJ_P0085205 Rhog protein_coding protein_coding MGP_LPJ_T0084181.1 MGP_LPJ_G0032278.1 mouse_genomes_project 7 77113635 77413655 - MGP_LPJ_P0084181 Slco3a1 protein_coding protein_coding MGP_LPJ_T0084182.1 MGP_LPJ_G0032278.1 mouse_genomes_project 7 77120073 77413636 - MGP_LPJ_P0084182 Slco3a1 protein_coding protein_coding MGP_LPJ_T0084183.1 MGP_LPJ_G0032278.1 mouse_genomes_project 7 77133586 77413802 - MGP_LPJ_P0084183 Slco3a1 protein_coding protein_coding MGP_LPJ_T0084184.1 MGP_LPJ_G0032278.1 mouse_genomes_project 7 77170721 77185481 - Slco3a1 protein_coding retained_intron MGP_LPJ_T0084185.1 MGP_LPJ_G0032278.1 mouse_genomes_project 7 77185035 77413496 - MGP_LPJ_P0084185 Slco3a1 protein_coding protein_coding MGP_LPJ_T0084186.1 MGP_LPJ_G0032278.1 mouse_genomes_project 7 77203847 77359769 - Slco3a1 protein_coding retained_intron MGP_LPJ_T0084187.1 MGP_LPJ_G0032278.1 mouse_genomes_project 7 77359672 77411616 - MGP_LPJ_P0084187 Slco3a1 protein_coding protein_coding MGP_LPJ_T0084188.1 MGP_LPJ_G0032278.1 mouse_genomes_project 7 77359819 77387290 - Slco3a1 protein_coding processed_transcript MGP_LPJ_T0008884.1 MGP_LPJ_G0007176.1 mouse_genomes_project 7 45340942 45341821 + Gm45123 lincRNA lincRNA MGP_LPJ_T0084645.1 MGP_LPJ_G0032388.1 mouse_genomes_project 7 90122467 90129734 + MGP_LPJ_P0084645 Olfr295 protein_coding protein_coding MGP_LPJ_T0084646.1 MGP_LPJ_G0032388.1 mouse_genomes_project 7 90124282 90129734 + MGP_LPJ_P0084646 Olfr295 protein_coding protein_coding MGP_LPJ_T0084077.1 MGP_LPJ_G0032258.1 mouse_genomes_project 7 68832690 68869178 - MGP_LPJ_P0084077 Aldh1a3 protein_coding protein_coding MGP_LPJ_T0084078.1 MGP_LPJ_G0032258.1 mouse_genomes_project 7 68841717 68847806 - Aldh1a3 protein_coding retained_intron MGP_LPJ_T0084079.1 MGP_LPJ_G0032258.1 mouse_genomes_project 7 68843867 68860894 - MGP_LPJ_P0084079 Aldh1a3 protein_coding protein_coding MGP_LPJ_T0084080.1 MGP_LPJ_G0032258.1 mouse_genomes_project 7 68850293 68868246 - Aldh1a3 protein_coding processed_transcript MGP_LPJ_T0084081.1 MGP_LPJ_G0032258.1 mouse_genomes_project 7 68850549 68867368 - Aldh1a3 protein_coding processed_transcript MGP_LPJ_T0083697.1 MGP_LPJ_G0032163.1 mouse_genomes_project 7 46957608 46966779 + MGP_LPJ_P0083697 Ccdc114 protein_coding protein_coding MGP_LPJ_T0083698.1 MGP_LPJ_G0032163.1 mouse_genomes_project 7 46957752 46958604 + Ccdc114 protein_coding retained_intron MGP_LPJ_T0083699.1 MGP_LPJ_G0032163.1 mouse_genomes_project 7 46957779 46966785 + MGP_LPJ_P0083699 Ccdc114 protein_coding protein_coding MGP_LPJ_T0083700.1 MGP_LPJ_G0032163.1 mouse_genomes_project 7 46957779 46971845 + MGP_LPJ_P0083700 Ccdc114 protein_coding protein_coding MGP_LPJ_T0083701.1 MGP_LPJ_G0032163.1 mouse_genomes_project 7 46958056 46987509 + MGP_LPJ_P0083701 Ccdc114 protein_coding protein_coding MGP_LPJ_T0005289.1 MGP_LPJ_G0004491.1 mouse_genomes_project 7 103792659 103798279 + Gm15635 antisense antisense MGP_LPJ_T0005290.1 MGP_LPJ_G0004491.1 mouse_genomes_project 7 103796358 103798190 + Gm15635 antisense antisense MGP_LPJ_T0005291.1 MGP_LPJ_G0004491.1 mouse_genomes_project 7 103796410 103798652 + Gm15635 antisense antisense MGP_LPJ_T0086953.1 MGP_LPJ_G0033033.1 mouse_genomes_project 7 139087453 139110182 + MGP_LPJ_P0086953 Fam175b protein_coding protein_coding MGP_LPJ_T0086954.1 MGP_LPJ_G0033033.1 mouse_genomes_project 7 139087469 139113982 + MGP_LPJ_P0086954 Fam175b protein_coding protein_coding MGP_LPJ_T0086955.1 MGP_LPJ_G0033033.1 mouse_genomes_project 7 139087481 139109952 + MGP_LPJ_P0086955 Fam175b protein_coding nonsense_mediated_decay MGP_LPJ_T0086956.1 MGP_LPJ_G0033033.1 mouse_genomes_project 7 139087493 139104802 + Fam175b protein_coding retained_intron MGP_LPJ_T0086957.1 MGP_LPJ_G0033033.1 mouse_genomes_project 7 139087493 139113979 + MGP_LPJ_P0086957 Fam175b protein_coding nonsense_mediated_decay MGP_LPJ_T0086958.1 MGP_LPJ_G0033033.1 mouse_genomes_project 7 139087551 139107685 + Fam175b protein_coding processed_transcript MGP_LPJ_T0086959.1 MGP_LPJ_G0033033.1 mouse_genomes_project 7 139108445 139113981 + Fam175b protein_coding retained_intron MGP_LPJ_T0099701.1 MGP_LPJ_G0037964.1 mouse_genomes_project 7 29667226 29667417 - Gm25259 snRNA snRNA MGP_LPJ_T0008978.1 MGP_LPJ_G0007239.1 mouse_genomes_project 7 96440453 96447951 + Gm26944 lincRNA lincRNA MGP_LPJ_T0015683.1 MGP_LPJ_G0013774.1 mouse_genomes_project 7 18283946 18284519 + processed_pseudogene processed_pseudogene MGP_LPJ_T0081451.1 MGP_LPJ_G0031576.1 mouse_genomes_project 7 10961412 10988644 + MGP_LPJ_P0081451 Bsph1 protein_coding protein_coding MGP_LPJ_T0081452.1 MGP_LPJ_G0031576.1 mouse_genomes_project 7 10961427 10988574 + MGP_LPJ_P0081452 Bsph1 protein_coding protein_coding MGP_LPJ_T0009025.1 MGP_LPJ_G0007270.1 mouse_genomes_project 7 130956855 131006133 - 4933440M02Rik lincRNA lincRNA MGP_LPJ_T0009026.1 MGP_LPJ_G0007270.1 mouse_genomes_project 7 130997594 131017649 - 4933440M02Rik lincRNA lincRNA MGP_LPJ_T0009027.1 MGP_LPJ_G0007270.1 mouse_genomes_project 7 130999733 131017665 - 4933440M02Rik lincRNA lincRNA MGP_LPJ_T0081517.1 MGP_LPJ_G0031603.1 mouse_genomes_project 7 14130355 14137235 - Dhx34 protein_coding retained_intron MGP_LPJ_T0081518.1 MGP_LPJ_G0031603.1 mouse_genomes_project 7 14130355 14155115 - MGP_LPJ_P0081518 Dhx34 protein_coding protein_coding MGP_LPJ_T0081519.1 MGP_LPJ_G0031603.1 mouse_genomes_project 7 14130429 14155110 - MGP_LPJ_P0081519 Dhx34 protein_coding protein_coding MGP_LPJ_T0081520.1 MGP_LPJ_G0031603.1 mouse_genomes_project 7 14130429 14155071 - MGP_LPJ_P0081520 Dhx34 protein_coding protein_coding MGP_LPJ_T0081521.1 MGP_LPJ_G0031603.1 mouse_genomes_project 7 14130429 14155071 - MGP_LPJ_P0081521 Dhx34 protein_coding protein_coding MGP_LPJ_T0081522.1 MGP_LPJ_G0031603.1 mouse_genomes_project 7 14130432 14155071 - MGP_LPJ_P0081522 Dhx34 protein_coding protein_coding MGP_LPJ_T0081523.1 MGP_LPJ_G0031603.1 mouse_genomes_project 7 14139021 14146462 - Dhx34 protein_coding processed_transcript MGP_LPJ_T0008979.1 MGP_LPJ_G0007240.1 mouse_genomes_project 7 96538733 96542594 + Gm26981 lincRNA lincRNA MGP_LPJ_T0002255.1 MGP_LPJ_G0002164.1 mouse_genomes_project 7 56708691 56710229 + TEC TEC MGP_LPJ_T0081236.1 MGP_LPJ_G0031481.1 mouse_genomes_project 7 2080984 2093837 + MGP_LPJ_P0081236 Zfp865 protein_coding protein_coding MGP_LPJ_T0082083.1 MGP_LPJ_G0031769.1 mouse_genomes_project 7 24166813 24181442 - MGP_LPJ_P0082083 Cxcl17 protein_coding protein_coding MGP_LPJ_T0082084.1 MGP_LPJ_G0031769.1 mouse_genomes_project 7 24166813 24181442 - MGP_LPJ_P0082084 Cxcl17 protein_coding protein_coding MGP_LPJ_T0083575.1 MGP_LPJ_G0032134.1 mouse_genomes_project 7 46466417 46483881 - MGP_LPJ_P0083575 Nucb1 protein_coding protein_coding MGP_LPJ_T0083576.1 MGP_LPJ_G0032134.1 mouse_genomes_project 7 46467715 46476795 - MGP_LPJ_P0083576 Nucb1 protein_coding protein_coding MGP_LPJ_T0083577.1 MGP_LPJ_G0032134.1 mouse_genomes_project 7 46468596 46469033 - Nucb1 protein_coding processed_transcript MGP_LPJ_T0083578.1 MGP_LPJ_G0032134.1 mouse_genomes_project 7 46468970 46476789 - Nucb1 protein_coding processed_transcript MGP_LPJ_T0083579.1 MGP_LPJ_G0032134.1 mouse_genomes_project 7 46471710 46472382 - Nucb1 protein_coding retained_intron MGP_LPJ_T0083580.1 MGP_LPJ_G0032134.1 mouse_genomes_project 7 46472270 46483790 - MGP_LPJ_P0083580 Nucb1 protein_coding protein_coding MGP_LPJ_T0083581.1 MGP_LPJ_G0032134.1 mouse_genomes_project 7 46475136 46483806 - MGP_LPJ_P0083581 Nucb1 protein_coding protein_coding MGP_LPJ_T0083582.1 MGP_LPJ_G0032134.1 mouse_genomes_project 7 46476603 46483864 - Nucb1 protein_coding processed_transcript MGP_LPJ_T0083583.1 MGP_LPJ_G0032134.1 mouse_genomes_project 7 46480643 46483860 - Nucb1 protein_coding retained_intron MGP_LPJ_T0083356.1 MGP_LPJ_G0032075.1 mouse_genomes_project 7 45393796 45409854 - MGP_LPJ_P0083356 Pold1 protein_coding protein_coding MGP_LPJ_T0083357.1 MGP_LPJ_G0032075.1 mouse_genomes_project 7 45393799 45394969 - Pold1 protein_coding retained_intron MGP_LPJ_T0083358.1 MGP_LPJ_G0032075.1 mouse_genomes_project 7 45393801 45409856 - Pold1 protein_coding retained_intron MGP_LPJ_T0083359.1 MGP_LPJ_G0032075.1 mouse_genomes_project 7 45393804 45396142 - Pold1 protein_coding retained_intron MGP_LPJ_T0083360.1 MGP_LPJ_G0032075.1 mouse_genomes_project 7 45393836 45409845 - MGP_LPJ_P0083360 Pold1 protein_coding nonsense_mediated_decay MGP_LPJ_T0083361.1 MGP_LPJ_G0032075.1 mouse_genomes_project 7 45394330 45395240 - Pold1 protein_coding retained_intron MGP_LPJ_T0083362.1 MGP_LPJ_G0032075.1 mouse_genomes_project 7 45394946 45397009 - Pold1 protein_coding retained_intron MGP_LPJ_T0083363.1 MGP_LPJ_G0032075.1 mouse_genomes_project 7 45398569 45399469 - Pold1 protein_coding retained_intron MGP_LPJ_T0083364.1 MGP_LPJ_G0032075.1 mouse_genomes_project 7 45403152 45409740 - MGP_LPJ_P0083364 Pold1 protein_coding protein_coding MGP_LPJ_T0084245.1 MGP_LPJ_G0032288.1 mouse_genomes_project 7 81999129 82005923 + MGP_LPJ_P0084245 Isg20 protein_coding protein_coding MGP_LPJ_T0084246.1 MGP_LPJ_G0032288.1 mouse_genomes_project 7 81999163 82006013 + MGP_LPJ_P0084246 Isg20 protein_coding protein_coding MGP_LPJ_T0084247.1 MGP_LPJ_G0032288.1 mouse_genomes_project 7 81999470 82006106 + MGP_LPJ_P0084247 Isg20 protein_coding protein_coding MGP_LPJ_T0084248.1 MGP_LPJ_G0032288.1 mouse_genomes_project 7 81999686 82002724 + Isg20 protein_coding retained_intron MGP_LPJ_T0084249.1 MGP_LPJ_G0032288.1 mouse_genomes_project 7 81999940 82006058 + MGP_LPJ_P0084249 Isg20 protein_coding protein_coding MGP_LPJ_T0084250.1 MGP_LPJ_G0032288.1 mouse_genomes_project 7 82000034 82005893 + MGP_LPJ_P0084250 Isg20 protein_coding protein_coding MGP_LPJ_T0084791.1 MGP_LPJ_G0032433.1 mouse_genomes_project 7 101474058 101482258 + MGP_LPJ_P0084791 Kctd14 protein_coding protein_coding MGP_LPJ_T0084792.1 MGP_LPJ_G0032433.1 mouse_genomes_project 7 101475939 101482254 + MGP_LPJ_P0084792 Kctd14 protein_coding nonsense_mediated_decay MGP_LPJ_T0084793.1 MGP_LPJ_G0032433.1 mouse_genomes_project 7 101475939 101482257 + MGP_LPJ_P0084793 Kctd14 protein_coding protein_coding MGP_LPJ_T0084794.1 MGP_LPJ_G0032433.1 mouse_genomes_project 7 101475939 101482257 + MGP_LPJ_P0084794 Kctd14 protein_coding protein_coding MGP_LPJ_T0084795.1 MGP_LPJ_G0032433.1 mouse_genomes_project 7 101475939 101481132 + MGP_LPJ_P0084795 Kctd14 protein_coding protein_coding MGP_LPJ_T0084796.1 MGP_LPJ_G0032433.1 mouse_genomes_project 7 101475957 101482256 + MGP_LPJ_P0084796 Kctd14 protein_coding protein_coding MGP_LPJ_T0083248.1 MGP_LPJ_G0032044.1 mouse_genomes_project 7 44550290 44554666 + MGP_LPJ_P0083248 Klk10 protein_coding protein_coding MGP_LPJ_T0011707.1 MGP_LPJ_G0009825.1 mouse_genomes_project 7 120124003 120124321 + Gm22669 misc_RNA misc_RNA MGP_LPJ_T0005341.1 MGP_LPJ_G0004529.1 mouse_genomes_project 7 150025759 150117515 - Kcnq1ot1 antisense antisense MGP_LPJ_T0082240.1 MGP_LPJ_G0031810.1 mouse_genomes_project 7 26280499 26304129 - MGP_LPJ_P0082240 Ltbp4 protein_coding protein_coding MGP_LPJ_T0015833.1 MGP_LPJ_G0013924.1 mouse_genomes_project 7 108509488 108516056 - processed_pseudogene processed_pseudogene MGP_LPJ_T0083318.1 MGP_LPJ_G0032070.1 mouse_genomes_project 7 45320967 45324638 + MGP_LPJ_P0083318 Josd2 protein_coding protein_coding MGP_LPJ_T0083319.1 MGP_LPJ_G0032070.1 mouse_genomes_project 7 45320993 45323166 + Josd2 protein_coding retained_intron MGP_LPJ_T0083320.1 MGP_LPJ_G0032070.1 mouse_genomes_project 7 45321009 45324635 + MGP_LPJ_P0083320 Josd2 protein_coding protein_coding MGP_LPJ_T0083321.1 MGP_LPJ_G0032070.1 mouse_genomes_project 7 45321010 45324637 + MGP_LPJ_P0083321 Josd2 protein_coding protein_coding MGP_LPJ_T0083322.1 MGP_LPJ_G0032070.1 mouse_genomes_project 7 45321023 45324522 + MGP_LPJ_P0083322 Josd2 protein_coding protein_coding MGP_LPJ_T0083323.1 MGP_LPJ_G0032070.1 mouse_genomes_project 7 45321026 45324648 + MGP_LPJ_P0083323 Josd2 protein_coding protein_coding MGP_LPJ_T0083324.1 MGP_LPJ_G0032070.1 mouse_genomes_project 7 45321030 45322300 + Josd2 protein_coding retained_intron MGP_LPJ_T0083325.1 MGP_LPJ_G0032070.1 mouse_genomes_project 7 45321032 45324634 + MGP_LPJ_P0083325 Josd2 protein_coding protein_coding MGP_LPJ_T0083326.1 MGP_LPJ_G0032070.1 mouse_genomes_project 7 45321037 45322422 + Josd2 protein_coding retained_intron MGP_LPJ_T0083327.1 MGP_LPJ_G0032070.1 mouse_genomes_project 7 45321059 45324607 + MGP_LPJ_P0083327 Josd2 protein_coding protein_coding MGP_LPJ_T0083328.1 MGP_LPJ_G0032070.1 mouse_genomes_project 7 45321063 45322337 + Josd2 protein_coding retained_intron MGP_LPJ_T0083329.1 MGP_LPJ_G0032070.1 mouse_genomes_project 7 45321072 45324162 + MGP_LPJ_P0083329 Josd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0083330.1 MGP_LPJ_G0032070.1 mouse_genomes_project 7 45321076 45322836 + Josd2 protein_coding processed_transcript MGP_LPJ_T0083331.1 MGP_LPJ_G0032070.1 mouse_genomes_project 7 45321076 45324637 + MGP_LPJ_P0083331 Josd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0083332.1 MGP_LPJ_G0032070.1 mouse_genomes_project 7 45321081 45324629 + MGP_LPJ_P0083332 Josd2 protein_coding protein_coding MGP_LPJ_T0083333.1 MGP_LPJ_G0032070.1 mouse_genomes_project 7 45321138 45324638 + Josd2 protein_coding retained_intron MGP_LPJ_T0083334.1 MGP_LPJ_G0032070.1 mouse_genomes_project 7 45321169 45321958 + Josd2 protein_coding retained_intron MGP_LPJ_T0083335.1 MGP_LPJ_G0032070.1 mouse_genomes_project 7 45321813 45324589 + Josd2 protein_coding processed_transcript MGP_LPJ_T0084342.1 MGP_LPJ_G0032308.1 mouse_genomes_project 7 83279382 83299928 - MGP_LPJ_P0084342 Idh2 protein_coding protein_coding MGP_LPJ_T0084343.1 MGP_LPJ_G0032308.1 mouse_genomes_project 7 83279386 83299868 - MGP_LPJ_P0084343 Idh2 protein_coding nonsense_mediated_decay MGP_LPJ_T0084344.1 MGP_LPJ_G0032308.1 mouse_genomes_project 7 83279565 83282941 - Idh2 protein_coding retained_intron MGP_LPJ_T0084345.1 MGP_LPJ_G0032308.1 mouse_genomes_project 7 83279579 83280567 - Idh2 protein_coding retained_intron MGP_LPJ_T0084346.1 MGP_LPJ_G0032308.1 mouse_genomes_project 7 83279595 83299840 - MGP_LPJ_P0084346 Idh2 protein_coding protein_coding MGP_LPJ_T0084347.1 MGP_LPJ_G0032308.1 mouse_genomes_project 7 83280565 83285413 - MGP_LPJ_P0084347 Idh2 protein_coding nonsense_mediated_decay MGP_LPJ_T0084348.1 MGP_LPJ_G0032308.1 mouse_genomes_project 7 83282703 83283671 - Idh2 protein_coding retained_intron MGP_LPJ_T0002279.1 MGP_LPJ_G0002188.1 mouse_genomes_project 7 76317572 76319052 - TEC TEC MGP_LPJ_T0087464.1 MGP_LPJ_G0033162.1 mouse_genomes_project 7 148781832 148797611 - MGP_LPJ_P0087464 Dusp8 protein_coding protein_coding MGP_LPJ_T0087465.1 MGP_LPJ_G0033162.1 mouse_genomes_project 7 148785936 148798182 - MGP_LPJ_P0087465 Dusp8 protein_coding protein_coding MGP_LPJ_T0084620.1 MGP_LPJ_G0032365.1 mouse_genomes_project 7 88059595 88125222 - MGP_LPJ_P0084620 Zfand6 protein_coding protein_coding MGP_LPJ_T0084621.1 MGP_LPJ_G0032365.1 mouse_genomes_project 7 88059595 88125232 - MGP_LPJ_P0084621 Zfand6 protein_coding protein_coding MGP_LPJ_T0085589.1 MGP_LPJ_G0032757.1 mouse_genomes_project 7 114241784 114396373 - Stk33 protein_coding processed_transcript MGP_LPJ_T0085590.1 MGP_LPJ_G0032757.1 mouse_genomes_project 7 114241784 114396368 - MGP_LPJ_P0085590 Stk33 protein_coding protein_coding MGP_LPJ_T0085591.1 MGP_LPJ_G0032757.1 mouse_genomes_project 7 114241784 114396109 - MGP_LPJ_P0085591 Stk33 protein_coding protein_coding MGP_LPJ_T0085592.1 MGP_LPJ_G0032757.1 mouse_genomes_project 7 114241784 114396373 - MGP_LPJ_P0085592 Stk33 protein_coding protein_coding MGP_LPJ_T0085593.1 MGP_LPJ_G0032757.1 mouse_genomes_project 7 114242156 114396290 - MGP_LPJ_P0085593 Stk33 protein_coding protein_coding MGP_LPJ_T0083233.1 MGP_LPJ_G0032037.1 mouse_genomes_project 7 44393470 44408420 + MGP_LPJ_P0083233 Ceacam18 protein_coding protein_coding MGP_LPJ_T0086469.1 MGP_LPJ_G0032934.1 mouse_genomes_project 7 132806891 132811186 - MGP_LPJ_P0086469 Maz protein_coding unknown_likely_coding MGP_LPJ_T0086470.1 MGP_LPJ_G0032934.1 mouse_genomes_project 7 132806900 132811219 - MGP_LPJ_P0086470 Maz protein_coding protein_coding MGP_LPJ_T0086471.1 MGP_LPJ_G0032934.1 mouse_genomes_project 7 132806901 132811081 - MGP_LPJ_P0086471 Maz protein_coding protein_coding MGP_LPJ_T0086472.1 MGP_LPJ_G0032934.1 mouse_genomes_project 7 132807656 132811339 - MGP_LPJ_P0086472 Maz protein_coding protein_coding MGP_LPJ_T0086473.1 MGP_LPJ_G0032934.1 mouse_genomes_project 7 132807816 132809899 - Maz protein_coding retained_intron MGP_LPJ_T0008974.1 MGP_LPJ_G0007235.1 mouse_genomes_project 7 87583724 87630414 + Gm26708 lincRNA lincRNA MGP_LPJ_T0083807.1 MGP_LPJ_G0032199.1 mouse_genomes_project 7 50129150 50136262 - MGP_LPJ_P0083807 Mrgprb2 protein_coding protein_coding MGP_LPJ_T0005272.1 MGP_LPJ_G0004480.1 mouse_genomes_project 7 87001227 87036003 - Gm16638 antisense antisense MGP_LPJ_T0002245.1 MGP_LPJ_G0002154.1 mouse_genomes_project 7 40094257 40098379 - TEC TEC MGP_LPJ_T0085995.1 MGP_LPJ_G0032849.1 mouse_genomes_project 7 126104669 126174588 + MGP_LPJ_P0085995 BC030336 protein_coding protein_coding MGP_LPJ_T0015830.1 MGP_LPJ_G0013921.1 mouse_genomes_project 7 107555628 107555929 + processed_pseudogene processed_pseudogene MGP_LPJ_T0083775.1 MGP_LPJ_G0032182.1 mouse_genomes_project 7 47975348 47996600 + MGP_LPJ_P0083775 Ldhc protein_coding protein_coding MGP_LPJ_T0083776.1 MGP_LPJ_G0032182.1 mouse_genomes_project 7 47975467 47994246 + MGP_LPJ_P0083776 Ldhc protein_coding protein_coding MGP_LPJ_T0083777.1 MGP_LPJ_G0032182.1 mouse_genomes_project 7 47976167 47994932 + MGP_LPJ_P0083777 Ldhc protein_coding protein_coding MGP_LPJ_T0102384.1 MGP_LPJ_G0040420.1 mouse_genomes_project 7 44934293 44935425 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0085963.1 MGP_LPJ_G0032838.1 mouse_genomes_project 7 125284789 125307459 + MGP_LPJ_P0085963 Lyrm1 protein_coding protein_coding MGP_LPJ_T0085964.1 MGP_LPJ_G0032838.1 mouse_genomes_project 7 125284795 125306990 + MGP_LPJ_P0085964 Lyrm1 protein_coding protein_coding MGP_LPJ_T0085965.1 MGP_LPJ_G0032838.1 mouse_genomes_project 7 125285220 125307455 + MGP_LPJ_P0085965 Lyrm1 protein_coding protein_coding MGP_LPJ_T0085966.1 MGP_LPJ_G0032838.1 mouse_genomes_project 7 125290294 125307461 + MGP_LPJ_P0085966 Lyrm1 protein_coding protein_coding MGP_LPJ_T0098304.1 MGP_LPJ_G0036585.1 mouse_genomes_project 7 73407977 73408062 + Gm24880 rRNA rRNA MGP_LPJ_T0081445.1 MGP_LPJ_G0031574.1 mouse_genomes_project 7 10833603 10874603 + MGP_LPJ_P0081445 Pla2g4c protein_coding protein_coding MGP_LPJ_T0081446.1 MGP_LPJ_G0031574.1 mouse_genomes_project 7 10834615 10875915 + MGP_LPJ_P0081446 Pla2g4c protein_coding protein_coding MGP_LPJ_T0081447.1 MGP_LPJ_G0031574.1 mouse_genomes_project 7 10838362 10875919 + MGP_LPJ_P0081447 Pla2g4c protein_coding protein_coding MGP_LPJ_T0083793.1 MGP_LPJ_G0032190.1 mouse_genomes_project 7 48346935 48957940 - MGP_LPJ_P0083793 Mrgpra9 protein_coding protein_coding MGP_LPJ_T0083794.1 MGP_LPJ_G0032190.1 mouse_genomes_project 7 48440383 48440998 - MGP_LPJ_P0083794 Mrgpra9 protein_coding protein_coding MGP_LPJ_T0018284.1 MGP_LPJ_G0015575.1 mouse_genomes_project 7 26670091 26671669 - Gm44685 processed_transcript processed_transcript MGP_LPJ_T0100977.1 MGP_LPJ_G0039240.1 mouse_genomes_project 7 96969716 96969842 - Gm25860 snoRNA snoRNA MGP_LPJ_T0084755.1 MGP_LPJ_G0032425.1 mouse_genomes_project 7 100141494 100915297 + MGP_LPJ_P0084755 Tenm4 protein_coding protein_coding MGP_LPJ_T0084756.1 MGP_LPJ_G0032425.1 mouse_genomes_project 7 100173239 100417275 + Tenm4 protein_coding retained_intron MGP_LPJ_T0084757.1 MGP_LPJ_G0032425.1 mouse_genomes_project 7 100173289 100479375 + Tenm4 protein_coding processed_transcript MGP_LPJ_T0084758.1 MGP_LPJ_G0032425.1 mouse_genomes_project 7 100188260 100419103 + Tenm4 protein_coding retained_intron MGP_LPJ_T0084759.1 MGP_LPJ_G0032425.1 mouse_genomes_project 7 100188268 100533827 + MGP_LPJ_P0084759 Tenm4 protein_coding protein_coding MGP_LPJ_T0084760.1 MGP_LPJ_G0032425.1 mouse_genomes_project 7 100188751 100917828 + MGP_LPJ_P0084760 Tenm4 protein_coding protein_coding MGP_LPJ_T0084761.1 MGP_LPJ_G0032425.1 mouse_genomes_project 7 100189785 100915282 + MGP_LPJ_P0084761 Tenm4 protein_coding protein_coding MGP_LPJ_T0084762.1 MGP_LPJ_G0032425.1 mouse_genomes_project 7 100502738 100533827 + MGP_LPJ_P0084762 Tenm4 protein_coding protein_coding MGP_LPJ_T0084763.1 MGP_LPJ_G0032425.1 mouse_genomes_project 7 100641968 100733694 + Tenm4 protein_coding retained_intron MGP_LPJ_T0084764.1 MGP_LPJ_G0032425.1 mouse_genomes_project 7 100781864 100801793 + MGP_LPJ_P0084764 Tenm4 protein_coding protein_coding MGP_LPJ_T0084765.1 MGP_LPJ_G0032425.1 mouse_genomes_project 7 100800700 100802630 + Tenm4 protein_coding processed_transcript MGP_LPJ_T0084766.1 MGP_LPJ_G0032425.1 mouse_genomes_project 7 100800700 100849196 + Tenm4 protein_coding retained_intron MGP_LPJ_T0087040.1 MGP_LPJ_G0033054.1 mouse_genomes_project 7 143655288 143781378 - MGP_LPJ_P0087040 Ebf3 protein_coding protein_coding MGP_LPJ_T0087041.1 MGP_LPJ_G0033054.1 mouse_genomes_project 7 143655288 143781378 - MGP_LPJ_P0087041 Ebf3 protein_coding protein_coding MGP_LPJ_T0087042.1 MGP_LPJ_G0033054.1 mouse_genomes_project 7 143655288 143781378 - MGP_LPJ_P0087042 Ebf3 protein_coding protein_coding MGP_LPJ_T0087043.1 MGP_LPJ_G0033054.1 mouse_genomes_project 7 143656313 143781347 - MGP_LPJ_P0087043 Ebf3 protein_coding protein_coding MGP_LPJ_T0085836.1 MGP_LPJ_G0032808.1 mouse_genomes_project 7 121562491 121667108 - MGP_LPJ_P0085836 Pik3c2a protein_coding protein_coding MGP_LPJ_T0085837.1 MGP_LPJ_G0032808.1 mouse_genomes_project 7 121562502 121565811 - Pik3c2a protein_coding retained_intron MGP_LPJ_T0085838.1 MGP_LPJ_G0032808.1 mouse_genomes_project 7 121564792 121594629 - MGP_LPJ_P0085838 Pik3c2a protein_coding nonsense_mediated_decay MGP_LPJ_T0085839.1 MGP_LPJ_G0032808.1 mouse_genomes_project 7 121564914 121667108 - MGP_LPJ_P0085839 Pik3c2a protein_coding protein_coding MGP_LPJ_T0085840.1 MGP_LPJ_G0032808.1 mouse_genomes_project 7 121567087 121567829 - Pik3c2a protein_coding retained_intron MGP_LPJ_T0085841.1 MGP_LPJ_G0032808.1 mouse_genomes_project 7 121615097 121667106 - MGP_LPJ_P0085841 Pik3c2a protein_coding nonsense_mediated_decay MGP_LPJ_T0085842.1 MGP_LPJ_G0032808.1 mouse_genomes_project 7 121616085 121667098 - Pik3c2a protein_coding retained_intron MGP_LPJ_T0005251.1 MGP_LPJ_G0004465.1 mouse_genomes_project 7 76088083 76154997 - A730056A06Rik antisense antisense MGP_LPJ_T0005252.1 MGP_LPJ_G0004465.1 mouse_genomes_project 7 76090325 76155006 - A730056A06Rik antisense antisense MGP_LPJ_T0015875.1 MGP_LPJ_G0013966.1 mouse_genomes_project 7 134004064 134004411 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005200.1 MGP_LPJ_G0004427.1 mouse_genomes_project 7 26214803 26223473 - Gm15567 antisense antisense MGP_LPJ_T0082461.1 MGP_LPJ_G0031869.1 mouse_genomes_project 7 28067887 28141783 - MGP_LPJ_P0082461 Actn4 protein_coding protein_coding MGP_LPJ_T0082462.1 MGP_LPJ_G0031869.1 mouse_genomes_project 7 28067888 28141626 - MGP_LPJ_P0082462 Actn4 protein_coding unknown_likely_coding MGP_LPJ_T0082463.1 MGP_LPJ_G0031869.1 mouse_genomes_project 7 28068292 28082025 - Actn4 protein_coding processed_transcript MGP_LPJ_T0082464.1 MGP_LPJ_G0031869.1 mouse_genomes_project 7 28068871 28069492 - Actn4 protein_coding retained_intron MGP_LPJ_T0082465.1 MGP_LPJ_G0031869.1 mouse_genomes_project 7 28070281 28071671 - Actn4 protein_coding retained_intron MGP_LPJ_T0082466.1 MGP_LPJ_G0031869.1 mouse_genomes_project 7 28073259 28141666 - MGP_LPJ_P0082466 Actn4 protein_coding protein_coding MGP_LPJ_T0082467.1 MGP_LPJ_G0031869.1 mouse_genomes_project 7 28076554 28082326 - Actn4 protein_coding processed_transcript MGP_LPJ_T0082468.1 MGP_LPJ_G0031869.1 mouse_genomes_project 7 28081653 28093861 - MGP_LPJ_P0082468 Actn4 protein_coding protein_coding MGP_LPJ_T0082469.1 MGP_LPJ_G0031869.1 mouse_genomes_project 7 28088017 28127226 - MGP_LPJ_P0082469 Actn4 protein_coding protein_coding MGP_LPJ_T0084574.1 MGP_LPJ_G0032350.1 mouse_genomes_project 7 85989384 86021400 + MGP_LPJ_P0084574 Efl1 protein_coding protein_coding MGP_LPJ_T0084575.1 MGP_LPJ_G0032350.1 mouse_genomes_project 7 85989384 86125327 + MGP_LPJ_P0084575 Efl1 protein_coding protein_coding MGP_LPJ_T0084576.1 MGP_LPJ_G0032350.1 mouse_genomes_project 7 85989399 86045027 + Efl1 protein_coding retained_intron MGP_LPJ_T0084577.1 MGP_LPJ_G0032350.1 mouse_genomes_project 7 85989411 86125327 + MGP_LPJ_P0084577 Efl1 protein_coding protein_coding MGP_LPJ_T0084578.1 MGP_LPJ_G0032350.1 mouse_genomes_project 7 86017074 86021389 + Efl1 protein_coding processed_transcript MGP_LPJ_T0087584.1 MGP_LPJ_G0033185.1 mouse_genomes_project 7 149868866 149874275 - MGP_LPJ_P0087584 Trpm5 protein_coding protein_coding MGP_LPJ_T0087591.1 MGP_LPJ_G0033185.1 mouse_genomes_project 7 149870804 149873751 - MGP_LPJ_P0087591 Trpm5 protein_coding protein_coding MGP_LPJ_T0087592.1 MGP_LPJ_G0033185.1 mouse_genomes_project 7 149870930 149874567 - Trpm5 protein_coding retained_intron MGP_LPJ_T0087593.1 MGP_LPJ_G0033185.1 mouse_genomes_project 7 149871242 149886928 - Trpm5 protein_coding retained_intron MGP_LPJ_T0087594.1 MGP_LPJ_G0033185.1 mouse_genomes_project 7 149871502 149894356 - MGP_LPJ_P0087594 Trpm5 protein_coding protein_coding MGP_LPJ_T0087595.1 MGP_LPJ_G0033185.1 mouse_genomes_project 7 149871891 149886843 - Trpm5 protein_coding retained_intron MGP_LPJ_T0087596.1 MGP_LPJ_G0033185.1 mouse_genomes_project 7 149872055 149894320 - MGP_LPJ_P0087596 Trpm5 protein_coding nonsense_mediated_decay MGP_LPJ_T0087597.1 MGP_LPJ_G0033185.1 mouse_genomes_project 7 149880429 149881636 - Trpm5 protein_coding retained_intron MGP_LPJ_T0010959.1 MGP_LPJ_G0009077.1 mouse_genomes_project 7 150390965 150391054 - Mir7064 miRNA miRNA MGP_LPJ_T0084984.1 MGP_LPJ_G0032478.1 mouse_genomes_project 7 104729093 104737760 + MGP_LPJ_P0084984 Ucp2 protein_coding protein_coding MGP_LPJ_T0084985.1 MGP_LPJ_G0032478.1 mouse_genomes_project 7 104729120 104732687 + Ucp2 protein_coding retained_intron MGP_LPJ_T0084986.1 MGP_LPJ_G0032478.1 mouse_genomes_project 7 104729549 104732902 + MGP_LPJ_P0084986 Ucp2 protein_coding protein_coding MGP_LPJ_T0084987.1 MGP_LPJ_G0032478.1 mouse_genomes_project 7 104729821 104733044 + MGP_LPJ_P0084987 Ucp2 protein_coding protein_coding MGP_LPJ_T0084988.1 MGP_LPJ_G0032478.1 mouse_genomes_project 7 104731817 104733995 + MGP_LPJ_P0084988 Ucp2 protein_coding protein_coding MGP_LPJ_T0084989.1 MGP_LPJ_G0032478.1 mouse_genomes_project 7 104732934 104734364 + Ucp2 protein_coding processed_transcript MGP_LPJ_T0084990.1 MGP_LPJ_G0032478.1 mouse_genomes_project 7 104733006 104734479 + Ucp2 protein_coding processed_transcript MGP_LPJ_T0084991.1 MGP_LPJ_G0032478.1 mouse_genomes_project 7 104733879 104734350 + Ucp2 protein_coding processed_transcript MGP_LPJ_T0084992.1 MGP_LPJ_G0032478.1 mouse_genomes_project 7 104734084 104735041 + Ucp2 protein_coding processed_transcript MGP_LPJ_T0015778.1 MGP_LPJ_G0013869.1 mouse_genomes_project 7 68625416 68625643 + processed_pseudogene processed_pseudogene MGP_LPJ_T0085574.1 MGP_LPJ_G0032751.1 mouse_genomes_project 7 113849102 113850169 - MGP_LPJ_P0085574 Olfr519 protein_coding protein_coding MGP_LPJ_T0085575.1 MGP_LPJ_G0032751.1 mouse_genomes_project 7 113849102 113850319 - MGP_LPJ_P0085575 Olfr519 protein_coding protein_coding MGP_LPJ_T0083472.1 MGP_LPJ_G0032104.1 mouse_genomes_project 7 45970506 45986550 + MGP_LPJ_P0083472 Nosip protein_coding protein_coding MGP_LPJ_T0083473.1 MGP_LPJ_G0032104.1 mouse_genomes_project 7 45970506 45986550 + MGP_LPJ_P0083473 Nosip protein_coding protein_coding MGP_LPJ_T0086247.1 MGP_LPJ_G0032899.1 mouse_genomes_project 7 132233080 132236532 + MGP_LPJ_P0086247 Tufm protein_coding protein_coding MGP_LPJ_T0086248.1 MGP_LPJ_G0032899.1 mouse_genomes_project 7 132233097 132236538 + MGP_LPJ_P0086248 Tufm protein_coding protein_coding MGP_LPJ_T0086250.1 MGP_LPJ_G0032899.1 mouse_genomes_project 7 132233348 132234666 + Tufm protein_coding processed_transcript MGP_LPJ_T0086251.1 MGP_LPJ_G0032899.1 mouse_genomes_project 7 132234333 132234853 + Tufm protein_coding retained_intron MGP_LPJ_T0086252.1 MGP_LPJ_G0032899.1 mouse_genomes_project 7 132235090 132236034 + MGP_LPJ_P0086252 Tufm protein_coding protein_coding MGP_LPJ_T0081796.1 MGP_LPJ_G0031689.1 mouse_genomes_project 7 17925033 17953966 - MGP_LPJ_P0081796 Clasrp protein_coding protein_coding MGP_LPJ_T0085523.1 MGP_LPJ_G0032707.1 mouse_genomes_project 7 112087974 112129408 + MGP_LPJ_P0085523 Nlrp14 protein_coding protein_coding MGP_LPJ_T0085524.1 MGP_LPJ_G0032707.1 mouse_genomes_project 7 112112454 112129417 + MGP_LPJ_P0085524 Nlrp14 protein_coding protein_coding MGP_LPJ_T0100979.1 MGP_LPJ_G0039242.1 mouse_genomes_project 7 103022339 103022461 + Gm23479 snoRNA snoRNA MGP_LPJ_T0082515.1 MGP_LPJ_G0031881.1 mouse_genomes_project 7 28459960 28461832 - MGP_LPJ_P0082515 2200002D01Rik protein_coding protein_coding MGP_LPJ_T0082516.1 MGP_LPJ_G0031881.1 mouse_genomes_project 7 28460971 28461738 - 2200002D01Rik protein_coding retained_intron MGP_LPJ_T0086293.1 MGP_LPJ_G0032907.1 mouse_genomes_project 7 132402262 132416738 + Sgf29 protein_coding processed_transcript MGP_LPJ_T0086294.1 MGP_LPJ_G0032907.1 mouse_genomes_project 7 132402262 132425658 + MGP_LPJ_P0086294 Sgf29 protein_coding protein_coding MGP_LPJ_T0086295.1 MGP_LPJ_G0032907.1 mouse_genomes_project 7 132402265 132417684 + MGP_LPJ_P0086295 Sgf29 protein_coding protein_coding MGP_LPJ_T0086296.1 MGP_LPJ_G0032907.1 mouse_genomes_project 7 132402275 132416833 + Sgf29 protein_coding retained_intron MGP_LPJ_T0086297.1 MGP_LPJ_G0032907.1 mouse_genomes_project 7 132402300 132424614 + Sgf29 protein_coding retained_intron MGP_LPJ_T0086298.1 MGP_LPJ_G0032907.1 mouse_genomes_project 7 132402355 132424972 + MGP_LPJ_P0086298 Sgf29 protein_coding nonsense_mediated_decay MGP_LPJ_T0086299.1 MGP_LPJ_G0032907.1 mouse_genomes_project 7 132413805 132425051 + MGP_LPJ_P0086299 Sgf29 protein_coding nonsense_mediated_decay MGP_LPJ_T0086300.1 MGP_LPJ_G0032907.1 mouse_genomes_project 7 132416526 132423421 + Sgf29 protein_coding retained_intron MGP_LPJ_T0086301.1 MGP_LPJ_G0032907.1 mouse_genomes_project 7 132424309 132425125 + MGP_LPJ_P0086301 Sgf29 protein_coding protein_coding MGP_LPJ_T0086302.1 MGP_LPJ_G0032907.1 mouse_genomes_project 7 132424763 132425512 + Sgf29 protein_coding processed_transcript MGP_LPJ_T0102342.1 MGP_LPJ_G0040378.1 mouse_genomes_project 7 32968568 32969835 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008930.1 MGP_LPJ_G0007211.1 mouse_genomes_project 7 75969114 76005918 - Gm30075 lincRNA lincRNA MGP_LPJ_T0087078.1 MGP_LPJ_G0033063.1 mouse_genomes_project 7 145649610 145755156 - MGP_LPJ_P0087078 Stk32c protein_coding protein_coding MGP_LPJ_T0087079.1 MGP_LPJ_G0033063.1 mouse_genomes_project 7 145649610 145729981 - MGP_LPJ_P0087079 Stk32c protein_coding protein_coding MGP_LPJ_T0010853.1 MGP_LPJ_G0008971.1 mouse_genomes_project 7 1454923 1455019 - Gm24605 miRNA miRNA MGP_LPJ_T0083029.1 MGP_LPJ_G0031987.1 mouse_genomes_project 7 35047434 35111672 + MGP_LPJ_P0083029 Rhpn2 protein_coding protein_coding MGP_LPJ_T0083030.1 MGP_LPJ_G0031987.1 mouse_genomes_project 7 35097135 35099473 + Rhpn2 protein_coding retained_intron MGP_LPJ_T0083031.1 MGP_LPJ_G0031987.1 mouse_genomes_project 7 35100373 35104421 + Rhpn2 protein_coding retained_intron MGP_LPJ_T0005195.1 MGP_LPJ_G0004424.1 mouse_genomes_project 7 24142380 24212228 + antisense antisense MGP_LPJ_T0005196.1 MGP_LPJ_G0004424.1 mouse_genomes_project 7 24142384 24151377 + antisense antisense MGP_LPJ_T0005197.1 MGP_LPJ_G0004424.1 mouse_genomes_project 7 24150445 24151214 + antisense antisense MGP_LPJ_T0084878.1 MGP_LPJ_G0032449.1 mouse_genomes_project 7 102650935 102726558 - MGP_LPJ_P0084878 Emsy protein_coding protein_coding MGP_LPJ_T0084879.1 MGP_LPJ_G0032449.1 mouse_genomes_project 7 102653627 102726325 - MGP_LPJ_P0084879 Emsy protein_coding protein_coding MGP_LPJ_T0084880.1 MGP_LPJ_G0032449.1 mouse_genomes_project 7 102655291 102726330 - MGP_LPJ_P0084880 Emsy protein_coding protein_coding MGP_LPJ_T0084881.1 MGP_LPJ_G0032449.1 mouse_genomes_project 7 102655957 102658923 - Emsy protein_coding retained_intron MGP_LPJ_T0084882.1 MGP_LPJ_G0032449.1 mouse_genomes_project 7 102658186 102659703 - Emsy protein_coding processed_transcript MGP_LPJ_T0084883.1 MGP_LPJ_G0032449.1 mouse_genomes_project 7 102659811 102677577 - MGP_LPJ_P0084883 Emsy protein_coding protein_coding MGP_LPJ_T0084884.1 MGP_LPJ_G0032449.1 mouse_genomes_project 7 102661181 102666995 - Emsy protein_coding retained_intron MGP_LPJ_T0084885.1 MGP_LPJ_G0032449.1 mouse_genomes_project 7 102661731 102680120 - MGP_LPJ_P0084885 Emsy protein_coding protein_coding MGP_LPJ_T0084886.1 MGP_LPJ_G0032449.1 mouse_genomes_project 7 102665160 102667455 - Emsy protein_coding retained_intron MGP_LPJ_T0084887.1 MGP_LPJ_G0032449.1 mouse_genomes_project 7 102667263 102726374 - MGP_LPJ_P0084887 Emsy protein_coding protein_coding MGP_LPJ_T0084888.1 MGP_LPJ_G0032449.1 mouse_genomes_project 7 102700013 102726343 - MGP_LPJ_P0084888 Emsy protein_coding protein_coding MGP_LPJ_T0084889.1 MGP_LPJ_G0032449.1 mouse_genomes_project 7 102707002 102714919 - MGP_LPJ_P0084889 Emsy protein_coding protein_coding MGP_LPJ_T0084890.1 MGP_LPJ_G0032449.1 mouse_genomes_project 7 102712779 102726562 - Emsy protein_coding retained_intron MGP_LPJ_T0086095.1 MGP_LPJ_G0032875.1 mouse_genomes_project 7 128523511 128536896 + MGP_LPJ_P0086095 Rbbp6 protein_coding protein_coding MGP_LPJ_T0086096.1 MGP_LPJ_G0032875.1 mouse_genomes_project 7 128531451 128568984 + MGP_LPJ_P0086096 Rbbp6 protein_coding protein_coding MGP_LPJ_T0086097.1 MGP_LPJ_G0032875.1 mouse_genomes_project 7 128531587 128545279 + MGP_LPJ_P0086097 Rbbp6 protein_coding protein_coding MGP_LPJ_T0086098.1 MGP_LPJ_G0032875.1 mouse_genomes_project 7 128531805 128568984 + MGP_LPJ_P0086098 Rbbp6 protein_coding protein_coding MGP_LPJ_T0086099.1 MGP_LPJ_G0032875.1 mouse_genomes_project 7 128536527 128539649 + Rbbp6 protein_coding retained_intron MGP_LPJ_T0086100.1 MGP_LPJ_G0032875.1 mouse_genomes_project 7 128536745 128544444 + Rbbp6 protein_coding retained_intron MGP_LPJ_T0086101.1 MGP_LPJ_G0032875.1 mouse_genomes_project 7 128543391 128568986 + MGP_LPJ_P0086101 Rbbp6 protein_coding protein_coding MGP_LPJ_T0086102.1 MGP_LPJ_G0032875.1 mouse_genomes_project 7 128543429 128546589 + Rbbp6 protein_coding retained_intron MGP_LPJ_T0086103.1 MGP_LPJ_G0032875.1 mouse_genomes_project 7 128551020 128553403 + Rbbp6 protein_coding retained_intron MGP_LPJ_T0085283.1 MGP_LPJ_G0032586.1 mouse_genomes_project 7 108243421 108244366 - MGP_LPJ_P0085283 Olfr629 protein_coding protein_coding MGP_LPJ_T0087240.1 MGP_LPJ_G0033120.1 mouse_genomes_project 7 147614802 147617407 + MGP_LPJ_P0087240 Ifitm1 protein_coding protein_coding MGP_LPJ_T0087241.1 MGP_LPJ_G0033120.1 mouse_genomes_project 7 147615609 147617407 + MGP_LPJ_P0087241 Ifitm1 protein_coding protein_coding MGP_LPJ_T0087242.1 MGP_LPJ_G0033120.1 mouse_genomes_project 7 147615621 147617407 + MGP_LPJ_P0087242 Ifitm1 protein_coding protein_coding MGP_LPJ_T0082362.1 MGP_LPJ_G0031845.1 mouse_genomes_project 7 27466277 27478791 - MGP_LPJ_P0082362 Plekhg2 protein_coding protein_coding MGP_LPJ_T0082363.1 MGP_LPJ_G0031845.1 mouse_genomes_project 7 27466278 27479135 - Plekhg2 protein_coding retained_intron MGP_LPJ_T0082364.1 MGP_LPJ_G0031845.1 mouse_genomes_project 7 27466278 27469899 - Plekhg2 protein_coding retained_intron MGP_LPJ_T0082365.1 MGP_LPJ_G0031845.1 mouse_genomes_project 7 27466278 27478132 - MGP_LPJ_P0082365 Plekhg2 protein_coding protein_coding MGP_LPJ_T0082366.1 MGP_LPJ_G0031845.1 mouse_genomes_project 7 27466278 27479052 - MGP_LPJ_P0082366 Plekhg2 protein_coding protein_coding MGP_LPJ_T0082367.1 MGP_LPJ_G0031845.1 mouse_genomes_project 7 27467765 27479157 - MGP_LPJ_P0082367 Plekhg2 protein_coding protein_coding MGP_LPJ_T0082368.1 MGP_LPJ_G0031845.1 mouse_genomes_project 7 27470561 27472050 - Plekhg2 protein_coding retained_intron MGP_LPJ_T0082369.1 MGP_LPJ_G0031845.1 mouse_genomes_project 7 27474967 27478285 - MGP_LPJ_P0082369 Plekhg2 protein_coding protein_coding MGP_LPJ_T0082370.1 MGP_LPJ_G0031845.1 mouse_genomes_project 7 27476638 27478638 - MGP_LPJ_P0082370 Plekhg2 protein_coding nonsense_mediated_decay MGP_LPJ_T0082371.1 MGP_LPJ_G0031845.1 mouse_genomes_project 7 27476973 27478066 - MGP_LPJ_P0082371 Plekhg2 protein_coding protein_coding MGP_LPJ_T0082075.1 MGP_LPJ_G0031767.1 mouse_genomes_project 7 24132222 24134306 - MGP_LPJ_P0082075 Cnfn protein_coding protein_coding MGP_LPJ_T0082076.1 MGP_LPJ_G0031767.1 mouse_genomes_project 7 24132224 24134327 - MGP_LPJ_P0082076 Cnfn protein_coding protein_coding MGP_LPJ_T0102395.1 MGP_LPJ_G0040431.1 mouse_genomes_project 7 48971076 48971279 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002326.1 MGP_LPJ_G0002234.1 mouse_genomes_project 7 128239040 128240668 - TEC TEC MGP_LPJ_T0008889.1 MGP_LPJ_G0007180.1 mouse_genomes_project 7 63324930 63533647 - lincRNA lincRNA MGP_LPJ_T0008890.1 MGP_LPJ_G0007180.1 mouse_genomes_project 7 63503297 63533655 - lincRNA lincRNA MGP_LPJ_T0086527.1 MGP_LPJ_G0032946.1 mouse_genomes_project 7 133057215 133060966 - MGP_LPJ_P0086527 Dctpp1 protein_coding protein_coding MGP_LPJ_T0083147.1 MGP_LPJ_G0032012.1 mouse_genomes_project 7 41805333 41825103 - MGP_LPJ_P0083147 protein_coding protein_coding MGP_LPJ_T0083148.1 MGP_LPJ_G0032012.1 mouse_genomes_project 7 41805333 41840454 - MGP_LPJ_P0083148 protein_coding protein_coding MGP_LPJ_T0083149.1 MGP_LPJ_G0032012.1 mouse_genomes_project 7 41826374 41840454 - MGP_LPJ_P0083149 protein_coding protein_coding MGP_LPJ_T0087698.1 MGP_LPJ_G0033212.1 mouse_genomes_project 7 152224174 152254075 - MGP_LPJ_P0087698 Tpcn2 protein_coding protein_coding MGP_LPJ_T0082042.1 MGP_LPJ_G0031760.1 mouse_genomes_project 7 23979550 23989127 - MGP_LPJ_P0082042 Gsk3a protein_coding protein_coding MGP_LPJ_T0082043.1 MGP_LPJ_G0031760.1 mouse_genomes_project 7 23979550 23989127 - MGP_LPJ_P0082043 Gsk3a protein_coding protein_coding MGP_LPJ_T0082044.1 MGP_LPJ_G0031760.1 mouse_genomes_project 7 23980760 23982540 - Gsk3a protein_coding retained_intron MGP_LPJ_T0087227.1 MGP_LPJ_G0033115.1 mouse_genomes_project 7 147538124 147539628 - MGP_LPJ_P0087227 Cox8b protein_coding protein_coding MGP_LPJ_T0102410.1 MGP_LPJ_G0040446.1 mouse_genomes_project 7 88248091 88249107 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0015676.1 MGP_LPJ_G0013767.1 mouse_genomes_project 7 15116859 15117324 - processed_pseudogene processed_pseudogene MGP_LPJ_T0087612.1 MGP_LPJ_G0033190.1 mouse_genomes_project 7 150322458 150323455 - MGP_LPJ_P0087612 Phlda2 protein_coding protein_coding MGP_LPJ_T0085255.1 MGP_LPJ_G0032560.1 mouse_genomes_project 7 107783096 107784044 + MGP_LPJ_P0085255 Olfr599 protein_coding protein_coding MGP_LPJ_T0002239.1 MGP_LPJ_G0002148.1 mouse_genomes_project 7 37214345 37215548 - TEC TEC MGP_LPJ_T0086897.1 MGP_LPJ_G0033016.1 mouse_genomes_project 7 137443140 137446871 - MGP_LPJ_P0086897 1700007K09Rik protein_coding protein_coding MGP_LPJ_T0086898.1 MGP_LPJ_G0033016.1 mouse_genomes_project 7 137443295 137444648 - MGP_LPJ_P0086898 1700007K09Rik protein_coding protein_coding MGP_LPJ_T0085494.1 MGP_LPJ_G0032680.1 mouse_genomes_project 7 110584882 110638617 - MGP_LPJ_P0085494 protein_coding protein_coding MGP_LPJ_T0085495.1 MGP_LPJ_G0032680.1 mouse_genomes_project 7 110604233 110638603 - protein_coding processed_transcript MGP_LPJ_T0102460.1 MGP_LPJ_G0040496.1 mouse_genomes_project 7 110500336 111451445 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0084598.1 MGP_LPJ_G0032357.1 mouse_genomes_project 7 87175286 87177159 + MGP_LPJ_P0084598 protein_coding protein_coding MGP_LPJ_T0084780.1 MGP_LPJ_G0032429.1 mouse_genomes_project 7 101337992 101357929 + MGP_LPJ_P0084780 Kctd21 protein_coding protein_coding MGP_LPJ_T0083015.1 MGP_LPJ_G0031984.1 mouse_genomes_project 7 34880105 34895006 + MGP_LPJ_P0083015 Slc7a10 protein_coding protein_coding MGP_LPJ_T0083016.1 MGP_LPJ_G0031984.1 mouse_genomes_project 7 34880105 34889340 + MGP_LPJ_P0083016 Slc7a10 protein_coding protein_coding MGP_LPJ_T0083017.1 MGP_LPJ_G0031984.1 mouse_genomes_project 7 34880141 34894802 + MGP_LPJ_P0083017 Slc7a10 protein_coding nonsense_mediated_decay MGP_LPJ_T0083018.1 MGP_LPJ_G0031984.1 mouse_genomes_project 7 34880202 34891839 + MGP_LPJ_P0083018 Slc7a10 protein_coding nonsense_mediated_decay MGP_LPJ_T0083019.1 MGP_LPJ_G0031984.1 mouse_genomes_project 7 34892802 34894783 + MGP_LPJ_P0083019 Slc7a10 protein_coding protein_coding MGP_LPJ_T0008846.1 MGP_LPJ_G0007147.1 mouse_genomes_project 7 34287341 34288058 - Gm44837 lincRNA lincRNA MGP_LPJ_T0010852.1 MGP_LPJ_G0008970.1 mouse_genomes_project 7 588151 588237 + Mir3572 miRNA miRNA MGP_LPJ_T0015837.1 MGP_LPJ_G0013928.1 mouse_genomes_project 7 110543791 110545242 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099692.1 MGP_LPJ_G0037955.1 mouse_genomes_project 7 2333422 2333529 - Gm23942 snRNA snRNA MGP_LPJ_T0083263.1 MGP_LPJ_G0032052.1 mouse_genomes_project 7 44763091 44769353 + MGP_LPJ_P0083263 protein_coding protein_coding MGP_LPJ_T0081254.1 MGP_LPJ_G0031491.1 mouse_genomes_project 7 2191723 2192736 - MGP_LPJ_P0081254 Rasl2-9 protein_coding protein_coding MGP_LPJ_T0084486.1 MGP_LPJ_G0032328.1 mouse_genomes_project 7 84155518 84200158 - Sec11a protein_coding processed_transcript MGP_LPJ_T0084487.1 MGP_LPJ_G0032328.1 mouse_genomes_project 7 84158345 84200126 - MGP_LPJ_P0084487 Sec11a protein_coding protein_coding MGP_LPJ_T0084488.1 MGP_LPJ_G0032328.1 mouse_genomes_project 7 84165785 84175912 - Sec11a protein_coding processed_transcript MGP_LPJ_T0084489.1 MGP_LPJ_G0032328.1 mouse_genomes_project 7 84165785 84173820 - Sec11a protein_coding retained_intron MGP_LPJ_T0084490.1 MGP_LPJ_G0032328.1 mouse_genomes_project 7 84165785 84200393 - MGP_LPJ_P0084490 Sec11a protein_coding protein_coding MGP_LPJ_T0084491.1 MGP_LPJ_G0032328.1 mouse_genomes_project 7 84165974 84166739 - Sec11a protein_coding retained_intron MGP_LPJ_T0084492.1 MGP_LPJ_G0032328.1 mouse_genomes_project 7 84166069 84200393 - MGP_LPJ_P0084492 Sec11a protein_coding protein_coding MGP_LPJ_T0084493.1 MGP_LPJ_G0032328.1 mouse_genomes_project 7 84166171 84200124 - Sec11a protein_coding processed_transcript MGP_LPJ_T0084494.1 MGP_LPJ_G0032328.1 mouse_genomes_project 7 84166497 84200393 - MGP_LPJ_P0084494 Sec11a protein_coding protein_coding MGP_LPJ_T0084495.1 MGP_LPJ_G0032328.1 mouse_genomes_project 7 84171303 84200355 - Sec11a protein_coding retained_intron MGP_LPJ_T0085211.1 MGP_LPJ_G0032520.1 mouse_genomes_project 7 106910675 106911620 + MGP_LPJ_P0085211 Olfr547 protein_coding protein_coding MGP_LPJ_T0102333.1 MGP_LPJ_G0040370.1 mouse_genomes_project 7 15703482 15709948 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0081309.1 MGP_LPJ_G0031518.1 mouse_genomes_project 7 3935401 3961929 - MGP_LPJ_P0081309 Peg3 protein_coding protein_coding MGP_LPJ_T0081310.1 MGP_LPJ_G0031518.1 mouse_genomes_project 7 3940904 3961927 - MGP_LPJ_P0081310 Peg3 protein_coding nonsense_mediated_decay MGP_LPJ_T0081311.1 MGP_LPJ_G0031518.1 mouse_genomes_project 7 3943205 3954723 - MGP_LPJ_P0081311 Peg3 protein_coding nonsense_mediated_decay MGP_LPJ_T0081312.1 MGP_LPJ_G0031518.1 mouse_genomes_project 7 3953440 3961927 - Peg3 protein_coding retained_intron MGP_LPJ_T0085539.1 MGP_LPJ_G0032716.1 mouse_genomes_project 7 112761460 112762533 - MGP_LPJ_P0085539 protein_coding protein_coding MGP_LPJ_T0084537.1 MGP_LPJ_G0032341.1 mouse_genomes_project 7 85092289 85102067 - MGP_LPJ_P0084537 3110040N11Rik protein_coding protein_coding MGP_LPJ_T0084538.1 MGP_LPJ_G0032341.1 mouse_genomes_project 7 85095033 85102090 - 3110040N11Rik protein_coding processed_transcript MGP_LPJ_T0084539.1 MGP_LPJ_G0032341.1 mouse_genomes_project 7 85095033 85101285 - 3110040N11Rik protein_coding processed_transcript MGP_LPJ_T0084540.1 MGP_LPJ_G0032341.1 mouse_genomes_project 7 85095052 85101730 - 3110040N11Rik protein_coding processed_transcript MGP_LPJ_T0084541.1 MGP_LPJ_G0032341.1 mouse_genomes_project 7 85095106 85102086 - MGP_LPJ_P0084541 3110040N11Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0100947.1 MGP_LPJ_G0039210.1 mouse_genomes_project 7 34912274 34912400 + Gm24505 snoRNA snoRNA MGP_LPJ_T0087134.1 MGP_LPJ_G0033078.1 mouse_genomes_project 7 146713188 146716927 + MGP_LPJ_P0087134 Prap1 protein_coding protein_coding MGP_LPJ_T0008855.1 MGP_LPJ_G0007156.1 mouse_genomes_project 7 36960482 36969182 - Gm28078 lincRNA lincRNA MGP_LPJ_T0085657.1 MGP_LPJ_G0032775.1 mouse_genomes_project 7 115654683 115656843 + MGP_LPJ_P0085657 Adm protein_coding protein_coding MGP_LPJ_T0085658.1 MGP_LPJ_G0032775.1 mouse_genomes_project 7 115654691 115656842 + MGP_LPJ_P0085658 Adm protein_coding protein_coding MGP_LPJ_T0085659.1 MGP_LPJ_G0032775.1 mouse_genomes_project 7 115655050 115655574 + Adm protein_coding retained_intron MGP_LPJ_T0081881.1 MGP_LPJ_G0031720.1 mouse_genomes_project 7 22767204 22769570 + protein_coding retained_intron MGP_LPJ_T0081882.1 MGP_LPJ_G0031720.1 mouse_genomes_project 7 22767209 22771302 + protein_coding processed_transcript MGP_LPJ_T0081883.1 MGP_LPJ_G0031720.1 mouse_genomes_project 7 22767231 22781241 + MGP_LPJ_P0081883 protein_coding protein_coding MGP_LPJ_T0081884.1 MGP_LPJ_G0031720.1 mouse_genomes_project 7 22767263 22771306 + protein_coding processed_transcript MGP_LPJ_T0080960.1 MGP_LPJ_G0031425.1 mouse_genomes_project 7 413727 427906 - MGP_LPJ_P0080960 Tarm1 protein_coding protein_coding MGP_LPJ_T0080961.1 MGP_LPJ_G0031425.1 mouse_genomes_project 7 415746 427972 - MGP_LPJ_P0080961 Tarm1 protein_coding protein_coding MGP_LPJ_T0080962.1 MGP_LPJ_G0031425.1 mouse_genomes_project 7 416940 427866 - MGP_LPJ_P0080962 Tarm1 protein_coding protein_coding MGP_LPJ_T0086305.1 MGP_LPJ_G0032909.1 mouse_genomes_project 7 132444866 132450966 - MGP_LPJ_P0086305 Slx1b protein_coding protein_coding MGP_LPJ_T0086306.1 MGP_LPJ_G0032909.1 mouse_genomes_project 7 132445865 132450821 - Slx1b protein_coding retained_intron MGP_LPJ_T0086307.1 MGP_LPJ_G0032909.1 mouse_genomes_project 7 132446305 132450927 - Slx1b protein_coding retained_intron MGP_LPJ_T0086308.1 MGP_LPJ_G0032909.1 mouse_genomes_project 7 132446305 132450906 - MGP_LPJ_P0086308 Slx1b protein_coding nonsense_mediated_decay MGP_LPJ_T0085234.1 MGP_LPJ_G0032541.1 mouse_genomes_project 7 107303755 107304800 + MGP_LPJ_P0085234 Olfr570 protein_coding protein_coding MGP_LPJ_T0101633.1 MGP_LPJ_G0039698.1 mouse_genomes_project 7 110602197 110605790 - translated_unprocessed_pseudogene translated_unprocessed_pseudogene MGP_LPJ_T0081360.1 MGP_LPJ_G0031553.1 mouse_genomes_project 7 10243790 10256349 - MGP_LPJ_P0081360 Zscan18 protein_coding unknown_likely_coding MGP_LPJ_T0083209.1 MGP_LPJ_G0032031.1 mouse_genomes_project 7 44225311 44243695 - MGP_LPJ_P0083209 Iglon5 protein_coding protein_coding MGP_LPJ_T0083210.1 MGP_LPJ_G0032031.1 mouse_genomes_project 7 44226595 44231970 - MGP_LPJ_P0083210 Iglon5 protein_coding protein_coding MGP_LPJ_T0081321.1 MGP_LPJ_G0031524.1 mouse_genomes_project 7 7406321 7423883 - MGP_LPJ_P0081321 protein_coding protein_coding MGP_LPJ_T0005229.1 MGP_LPJ_G0004450.1 mouse_genomes_project 7 37536970 37539522 + 4930505M18Rik antisense antisense MGP_LPJ_T0102336.1 MGP_LPJ_G0031752.1 mouse_genomes_project 7 23650764 23651350 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0010955.1 MGP_LPJ_G0009073.1 mouse_genomes_project 7 148314352 148314443 + Mir7063 miRNA miRNA MGP_LPJ_T0085925.1 MGP_LPJ_G0032830.1 mouse_genomes_project 7 124929566 124979508 + MGP_LPJ_P0085925 Acsm2 protein_coding protein_coding MGP_LPJ_T0085926.1 MGP_LPJ_G0032830.1 mouse_genomes_project 7 124937033 124975441 + MGP_LPJ_P0085926 Acsm2 protein_coding protein_coding MGP_LPJ_T0085927.1 MGP_LPJ_G0032830.1 mouse_genomes_project 7 124937248 124979508 + MGP_LPJ_P0085927 Acsm2 protein_coding protein_coding MGP_LPJ_T0085928.1 MGP_LPJ_G0032830.1 mouse_genomes_project 7 124937252 124957277 + MGP_LPJ_P0085928 Acsm2 protein_coding protein_coding MGP_LPJ_T0085929.1 MGP_LPJ_G0032830.1 mouse_genomes_project 7 124937326 124961000 + Acsm2 protein_coding processed_transcript MGP_LPJ_T0085930.1 MGP_LPJ_G0032830.1 mouse_genomes_project 7 124959742 124975010 + MGP_LPJ_P0085930 Acsm2 protein_coding protein_coding MGP_LPJ_T0085931.1 MGP_LPJ_G0032830.1 mouse_genomes_project 7 124967690 124971393 + MGP_LPJ_P0085931 Acsm2 protein_coding protein_coding MGP_LPJ_T0085932.1 MGP_LPJ_G0032830.1 mouse_genomes_project 7 124969709 124970299 + Acsm2 protein_coding retained_intron MGP_LPJ_T0102409.1 MGP_LPJ_G0040445.1 mouse_genomes_project 7 88236639 88238780 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0015787.1 MGP_LPJ_G0013878.1 mouse_genomes_project 7 77566562 77566790 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005210.1 MGP_LPJ_G0004436.1 mouse_genomes_project 7 30051140 30074673 + Tmem147os antisense antisense MGP_LPJ_T0005211.1 MGP_LPJ_G0004436.1 mouse_genomes_project 7 30054112 30060825 + Tmem147os antisense antisense MGP_LPJ_T0015667.1 MGP_LPJ_G0013758.1 mouse_genomes_project 7 11587209 11587387 + processed_pseudogene processed_pseudogene MGP_LPJ_T0086063.1 MGP_LPJ_G0032868.1 mouse_genomes_project 7 127618646 127644910 - MGP_LPJ_P0086063 Palb2 protein_coding protein_coding MGP_LPJ_T0086064.1 MGP_LPJ_G0032868.1 mouse_genomes_project 7 127618646 127644845 - MGP_LPJ_P0086064 Palb2 protein_coding protein_coding MGP_LPJ_T0086065.1 MGP_LPJ_G0032868.1 mouse_genomes_project 7 127618646 127644947 - MGP_LPJ_P0086065 Palb2 protein_coding protein_coding MGP_LPJ_T0086066.1 MGP_LPJ_G0032868.1 mouse_genomes_project 7 127618649 127623493 - Palb2 protein_coding retained_intron MGP_LPJ_T0086067.1 MGP_LPJ_G0032868.1 mouse_genomes_project 7 127618651 127635413 - MGP_LPJ_P0086067 Palb2 protein_coding nonsense_mediated_decay MGP_LPJ_T0086068.1 MGP_LPJ_G0032868.1 mouse_genomes_project 7 127623024 127644918 - MGP_LPJ_P0086068 Palb2 protein_coding protein_coding MGP_LPJ_T0086069.1 MGP_LPJ_G0032868.1 mouse_genomes_project 7 127623024 127644889 - MGP_LPJ_P0086069 Palb2 protein_coding nonsense_mediated_decay MGP_LPJ_T0086070.1 MGP_LPJ_G0032868.1 mouse_genomes_project 7 127636651 127644920 - Palb2 protein_coding retained_intron MGP_LPJ_T0086071.1 MGP_LPJ_G0032868.1 mouse_genomes_project 7 127642867 127644986 - Palb2 protein_coding retained_intron MGP_LPJ_T0084128.1 MGP_LPJ_G0032266.1 mouse_genomes_project 7 70135528 70162052 + Ttc23 protein_coding retained_intron MGP_LPJ_T0084129.1 MGP_LPJ_G0032266.1 mouse_genomes_project 7 70135528 70223359 + MGP_LPJ_P0084129 Ttc23 protein_coding protein_coding MGP_LPJ_T0084130.1 MGP_LPJ_G0032266.1 mouse_genomes_project 7 70135543 70223361 + MGP_LPJ_P0084130 Ttc23 protein_coding protein_coding MGP_LPJ_T0084131.1 MGP_LPJ_G0032266.1 mouse_genomes_project 7 70135568 70223361 + Ttc23 protein_coding processed_transcript MGP_LPJ_T0084132.1 MGP_LPJ_G0032266.1 mouse_genomes_project 7 70135572 70137314 + Ttc23 protein_coding processed_transcript MGP_LPJ_T0084133.1 MGP_LPJ_G0032266.1 mouse_genomes_project 7 70135578 70148945 + Ttc23 protein_coding processed_transcript MGP_LPJ_T0084134.1 MGP_LPJ_G0032266.1 mouse_genomes_project 7 70137276 70175712 + Ttc23 protein_coding processed_transcript MGP_LPJ_T0084135.1 MGP_LPJ_G0032266.1 mouse_genomes_project 7 70143303 70175962 + Ttc23 protein_coding processed_transcript MGP_LPJ_T0084136.1 MGP_LPJ_G0032266.1 mouse_genomes_project 7 70143573 70223358 + MGP_LPJ_P0084136 Ttc23 protein_coding protein_coding MGP_LPJ_T0084137.1 MGP_LPJ_G0032266.1 mouse_genomes_project 7 70155112 70159450 + Ttc23 protein_coding processed_transcript MGP_LPJ_T0084138.1 MGP_LPJ_G0032266.1 mouse_genomes_project 7 70159468 70195020 + Ttc23 protein_coding processed_transcript MGP_LPJ_T0084139.1 MGP_LPJ_G0032266.1 mouse_genomes_project 7 70175935 70222837 + Ttc23 protein_coding processed_transcript MGP_LPJ_T0084140.1 MGP_LPJ_G0032266.1 mouse_genomes_project 7 70222045 70222799 + Ttc23 protein_coding processed_transcript MGP_LPJ_T0082491.1 MGP_LPJ_G0031874.1 mouse_genomes_project 7 28351163 28354863 - MGP_LPJ_P0082491 Fam98c protein_coding protein_coding MGP_LPJ_T0082492.1 MGP_LPJ_G0031874.1 mouse_genomes_project 7 28351164 28354836 - Fam98c protein_coding retained_intron MGP_LPJ_T0082493.1 MGP_LPJ_G0031874.1 mouse_genomes_project 7 28351164 28354856 - Fam98c protein_coding retained_intron MGP_LPJ_T0082494.1 MGP_LPJ_G0031874.1 mouse_genomes_project 7 28351164 28354836 - Fam98c protein_coding retained_intron MGP_LPJ_T0082495.1 MGP_LPJ_G0031874.1 mouse_genomes_project 7 28351164 28354836 - MGP_LPJ_P0082495 Fam98c protein_coding protein_coding MGP_LPJ_T0082496.1 MGP_LPJ_G0031874.1 mouse_genomes_project 7 28351171 28354813 - MGP_LPJ_P0082496 Fam98c protein_coding protein_coding MGP_LPJ_T0082497.1 MGP_LPJ_G0031874.1 mouse_genomes_project 7 28351206 28354372 - MGP_LPJ_P0082497 Fam98c protein_coding protein_coding MGP_LPJ_T0082498.1 MGP_LPJ_G0031874.1 mouse_genomes_project 7 28352045 28354887 - MGP_LPJ_P0082498 Fam98c protein_coding protein_coding MGP_LPJ_T0082499.1 MGP_LPJ_G0031874.1 mouse_genomes_project 7 28352076 28354256 - MGP_LPJ_P0082499 Fam98c protein_coding protein_coding MGP_LPJ_T0082500.1 MGP_LPJ_G0031874.1 mouse_genomes_project 7 28352159 28354856 - Fam98c protein_coding processed_transcript MGP_LPJ_T0099693.1 MGP_LPJ_G0037956.1 mouse_genomes_project 7 10420684 10420791 + Gm26325 snRNA snRNA MGP_LPJ_T0008872.1 MGP_LPJ_G0007167.1 mouse_genomes_project 7 40388273 40484888 - Gm28807 lincRNA lincRNA MGP_LPJ_T0015796.1 MGP_LPJ_G0013887.1 mouse_genomes_project 7 83641446 83642977 + processed_pseudogene processed_pseudogene MGP_LPJ_T0087539.1 MGP_LPJ_G0033177.1 mouse_genomes_project 7 149302780 149310700 + Mrpl23 protein_coding processed_transcript MGP_LPJ_T0087540.1 MGP_LPJ_G0033177.1 mouse_genomes_project 7 149302993 149310710 + MGP_LPJ_P0087540 Mrpl23 protein_coding protein_coding MGP_LPJ_T0087541.1 MGP_LPJ_G0033177.1 mouse_genomes_project 7 149304526 149307252 + Mrpl23 protein_coding retained_intron MGP_LPJ_T0087542.1 MGP_LPJ_G0033177.1 mouse_genomes_project 7 149306108 149307873 + Mrpl23 protein_coding retained_intron MGP_LPJ_T0082181.1 MGP_LPJ_G0031797.1 mouse_genomes_project 7 25941055 25950641 + Cyp2a12 protein_coding retained_intron MGP_LPJ_T0082182.1 MGP_LPJ_G0031797.1 mouse_genomes_project 7 25941064 25950098 + MGP_LPJ_P0082182 Cyp2a12 protein_coding protein_coding MGP_LPJ_T0081551.1 MGP_LPJ_G0031613.1 mouse_genomes_project 7 14457147 14585179 - MGP_LPJ_P0081551 Arhgap35 protein_coding protein_coding MGP_LPJ_T0081552.1 MGP_LPJ_G0031613.1 mouse_genomes_project 7 14459693 14585123 - MGP_LPJ_P0081552 Arhgap35 protein_coding protein_coding MGP_LPJ_T0082077.1 MGP_LPJ_G0031768.1 mouse_genomes_project 7 24145208 24161285 - MGP_LPJ_P0082077 Lipe protein_coding protein_coding MGP_LPJ_T0082078.1 MGP_LPJ_G0031768.1 mouse_genomes_project 7 24145220 24164378 - MGP_LPJ_P0082078 Lipe protein_coding protein_coding MGP_LPJ_T0082079.1 MGP_LPJ_G0031768.1 mouse_genomes_project 7 24148793 24150567 - MGP_LPJ_P0082079 Lipe protein_coding nonsense_mediated_decay MGP_LPJ_T0082080.1 MGP_LPJ_G0031768.1 mouse_genomes_project 7 24148814 24149449 - Lipe protein_coding retained_intron MGP_LPJ_T0082081.1 MGP_LPJ_G0031768.1 mouse_genomes_project 7 24154201 24156118 - MGP_LPJ_P0082081 Lipe protein_coding protein_coding MGP_LPJ_T0082082.1 MGP_LPJ_G0031768.1 mouse_genomes_project 7 24163126 24164377 - MGP_LPJ_P0082082 Lipe protein_coding protein_coding MGP_LPJ_T0082357.1 MGP_LPJ_G0031843.1 mouse_genomes_project 7 27416342 27442682 - MGP_LPJ_P0082357 Supt5 protein_coding unknown_likely_coding MGP_LPJ_T0082358.1 MGP_LPJ_G0031843.1 mouse_genomes_project 7 27416351 27442643 - MGP_LPJ_P0082358 Supt5 protein_coding protein_coding MGP_LPJ_T0085742.1 MGP_LPJ_G0032792.1 mouse_genomes_project 7 118527680 118530679 - MGP_LPJ_P0085742 Pth protein_coding protein_coding MGP_LPJ_T0085566.1 MGP_LPJ_G0032743.1 mouse_genomes_project 7 113599932 113600865 + MGP_LPJ_P0085566 Olfr508 protein_coding protein_coding MGP_LPJ_T0015636.1 MGP_LPJ_G0013727.1 mouse_genomes_project 7 182097 182977 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005259.1 MGP_LPJ_G0004471.1 mouse_genomes_project 7 82869617 82871690 + 9330171B17Rik antisense antisense MGP_LPJ_T0005260.1 MGP_LPJ_G0004471.1 mouse_genomes_project 7 82869705 82871692 + 9330171B17Rik antisense antisense MGP_LPJ_T0086123.1 MGP_LPJ_G0032878.1 mouse_genomes_project 7 128852664 128947077 - MGP_LPJ_P0086123 Arhgap17 protein_coding protein_coding MGP_LPJ_T0086124.1 MGP_LPJ_G0032878.1 mouse_genomes_project 7 128852717 128947112 - MGP_LPJ_P0086124 Arhgap17 protein_coding protein_coding MGP_LPJ_T0086125.1 MGP_LPJ_G0032878.1 mouse_genomes_project 7 128852717 128947112 - MGP_LPJ_P0086125 Arhgap17 protein_coding protein_coding MGP_LPJ_T0086126.1 MGP_LPJ_G0032878.1 mouse_genomes_project 7 128852721 128947104 - MGP_LPJ_P0086126 Arhgap17 protein_coding protein_coding MGP_LPJ_T0086127.1 MGP_LPJ_G0032878.1 mouse_genomes_project 7 128852726 128947129 - MGP_LPJ_P0086127 Arhgap17 protein_coding nonsense_mediated_decay MGP_LPJ_T0086128.1 MGP_LPJ_G0032878.1 mouse_genomes_project 7 128852831 128947111 - MGP_LPJ_P0086128 Arhgap17 protein_coding protein_coding MGP_LPJ_T0086129.1 MGP_LPJ_G0032878.1 mouse_genomes_project 7 128856383 128859688 - Arhgap17 protein_coding retained_intron MGP_LPJ_T0086130.1 MGP_LPJ_G0032878.1 mouse_genomes_project 7 128860432 128870037 - Arhgap17 protein_coding retained_intron MGP_LPJ_T0086131.1 MGP_LPJ_G0032878.1 mouse_genomes_project 7 128868725 128947141 - Arhgap17 protein_coding retained_intron MGP_LPJ_T0086132.1 MGP_LPJ_G0032878.1 mouse_genomes_project 7 128896543 128947141 - MGP_LPJ_P0086132 Arhgap17 protein_coding nonsense_mediated_decay MGP_LPJ_T0086133.1 MGP_LPJ_G0032878.1 mouse_genomes_project 7 128946002 128947102 - Arhgap17 protein_coding retained_intron MGP_LPJ_T0082183.1 MGP_LPJ_G0031798.1 mouse_genomes_project 7 26058493 26076292 + MGP_LPJ_P0082183 Cyp2f2 protein_coding protein_coding MGP_LPJ_T0082184.1 MGP_LPJ_G0031798.1 mouse_genomes_project 7 26058545 26068159 + Cyp2f2 protein_coding processed_transcript MGP_LPJ_T0082185.1 MGP_LPJ_G0031798.1 mouse_genomes_project 7 26064655 26073867 + MGP_LPJ_P0082185 Cyp2f2 protein_coding protein_coding MGP_LPJ_T0081507.1 MGP_LPJ_G0031601.1 mouse_genomes_project 7 14057888 14091736 + MGP_LPJ_P0081507 Slc8a2 protein_coding protein_coding MGP_LPJ_T0083145.1 MGP_LPJ_G0032011.1 mouse_genomes_project 7 41719530 41750530 - MGP_LPJ_P0083145 AW146154 protein_coding protein_coding MGP_LPJ_T0083146.1 MGP_LPJ_G0032011.1 mouse_genomes_project 7 41722985 41724120 - AW146154 protein_coding retained_intron MGP_LPJ_T0010894.1 MGP_LPJ_G0009012.1 mouse_genomes_project 7 55662815 55662944 - Mir6238 miRNA miRNA MGP_LPJ_T0081356.1 MGP_LPJ_G0031549.1 mouse_genomes_project 7 10018605 10033395 - MGP_LPJ_P0081356 protein_coding protein_coding MGP_LPJ_T0087690.1 MGP_LPJ_G0033210.1 mouse_genomes_project 7 151829404 151852770 + MGP_LPJ_P0087690 Oraov1 protein_coding protein_coding MGP_LPJ_T0087691.1 MGP_LPJ_G0033210.1 mouse_genomes_project 7 151829441 151836073 + MGP_LPJ_P0087691 Oraov1 protein_coding protein_coding MGP_LPJ_T0087692.1 MGP_LPJ_G0033210.1 mouse_genomes_project 7 151829477 151832008 + Oraov1 protein_coding retained_intron MGP_LPJ_T0087693.1 MGP_LPJ_G0033210.1 mouse_genomes_project 7 151829479 151830764 + Oraov1 protein_coding processed_transcript MGP_LPJ_T0087694.1 MGP_LPJ_G0033210.1 mouse_genomes_project 7 151829486 151851508 + MGP_LPJ_P0087694 Oraov1 protein_coding protein_coding MGP_LPJ_T0087695.1 MGP_LPJ_G0033210.1 mouse_genomes_project 7 151830442 151834768 + Oraov1 protein_coding retained_intron MGP_LPJ_T0083854.1 MGP_LPJ_G0032211.1 mouse_genomes_project 7 53208828 53298931 + MGP_LPJ_P0083854 Ano5 protein_coding unknown_likely_coding MGP_LPJ_T0083855.1 MGP_LPJ_G0032211.1 mouse_genomes_project 7 53209573 53303788 + MGP_LPJ_P0083855 Ano5 protein_coding protein_coding MGP_LPJ_T0083856.1 MGP_LPJ_G0032211.1 mouse_genomes_project 7 53209587 53298931 + MGP_LPJ_P0083856 Ano5 protein_coding unknown_likely_coding MGP_LPJ_T0081524.1 MGP_LPJ_G0031604.1 mouse_genomes_project 7 14168726 14177982 - MGP_LPJ_P0081524 C5ar2 protein_coding protein_coding MGP_LPJ_T0081525.1 MGP_LPJ_G0031604.1 mouse_genomes_project 7 14168726 14180856 - MGP_LPJ_P0081525 C5ar2 protein_coding protein_coding MGP_LPJ_T0005276.1 MGP_LPJ_G0004483.1 mouse_genomes_project 7 96543010 96550306 - 4632427E13Rik antisense antisense MGP_LPJ_T0005277.1 MGP_LPJ_G0004483.1 mouse_genomes_project 7 96546481 96550315 - 4632427E13Rik antisense antisense MGP_LPJ_T0005278.1 MGP_LPJ_G0004483.1 mouse_genomes_project 7 96546502 96550315 - 4632427E13Rik antisense antisense MGP_LPJ_T0005279.1 MGP_LPJ_G0004483.1 mouse_genomes_project 7 96549548 96550306 - 4632427E13Rik antisense antisense MGP_LPJ_T0015643.1 MGP_LPJ_G0013734.1 mouse_genomes_project 7 1199628 1199782 + processed_pseudogene processed_pseudogene MGP_LPJ_T0087568.1 MGP_LPJ_G0033182.1 mouse_genomes_project 7 149761155 149763598 - MGP_LPJ_P0087568 Ascl2 protein_coding protein_coding MGP_LPJ_T0087569.1 MGP_LPJ_G0033182.1 mouse_genomes_project 7 149761162 149763598 - MGP_LPJ_P0087569 Ascl2 protein_coding protein_coding MGP_LPJ_T0015864.1 MGP_LPJ_G0013955.1 mouse_genomes_project 7 132480865 132481339 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005180.1 MGP_LPJ_G0004413.1 mouse_genomes_project 7 17277973 17285716 - Mypopos antisense antisense MGP_LPJ_T0005181.1 MGP_LPJ_G0004413.1 mouse_genomes_project 7 17278292 17285743 - Mypopos antisense antisense MGP_LPJ_T0005182.1 MGP_LPJ_G0004413.1 mouse_genomes_project 7 17279484 17281847 - Mypopos antisense antisense MGP_LPJ_T0005183.1 MGP_LPJ_G0004413.1 mouse_genomes_project 7 17281847 17285727 - Mypopos antisense antisense MGP_LPJ_T0102297.1 MGP_LPJ_G0040334.1 mouse_genomes_project 7 7980130 7980450 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002237.1 MGP_LPJ_G0002146.1 mouse_genomes_project 7 36548842 36551225 + TEC TEC MGP_LPJ_T0086462.1 MGP_LPJ_G0032933.1 mouse_genomes_project 7 132802297 132805978 - MGP_LPJ_P0086462 Prrt2 protein_coding protein_coding MGP_LPJ_T0086463.1 MGP_LPJ_G0032933.1 mouse_genomes_project 7 132802309 132805741 - Prrt2 protein_coding retained_intron MGP_LPJ_T0086464.1 MGP_LPJ_G0032933.1 mouse_genomes_project 7 132802414 132804669 - MGP_LPJ_P0086464 Prrt2 protein_coding protein_coding MGP_LPJ_T0086465.1 MGP_LPJ_G0032933.1 mouse_genomes_project 7 132802924 132804362 - MGP_LPJ_P0086465 Prrt2 protein_coding nonsense_mediated_decay MGP_LPJ_T0086466.1 MGP_LPJ_G0032933.1 mouse_genomes_project 7 132803273 132805723 - Prrt2 protein_coding processed_transcript MGP_LPJ_T0086467.1 MGP_LPJ_G0032933.1 mouse_genomes_project 7 132803470 132805904 - MGP_LPJ_P0086467 Prrt2 protein_coding protein_coding MGP_LPJ_T0086468.1 MGP_LPJ_G0032933.1 mouse_genomes_project 7 132804161 132805122 - Prrt2 protein_coding processed_transcript MGP_LPJ_T0082699.1 MGP_LPJ_G0031926.1 mouse_genomes_project 7 29835178 29847978 - MGP_LPJ_P0082699 Arhgap33 protein_coding unknown_likely_coding MGP_LPJ_T0102369.1 MGP_LPJ_G0040405.1 mouse_genomes_project 7 42742506 42746804 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0005298.1 MGP_LPJ_G0004497.1 mouse_genomes_project 7 118676821 118703947 - Far1os antisense antisense MGP_LPJ_T0005299.1 MGP_LPJ_G0004497.1 mouse_genomes_project 7 118685622 118712580 - Far1os antisense antisense MGP_LPJ_T0081401.1 MGP_LPJ_G0031564.1 mouse_genomes_project 7 10517318 10524207 + MGP_LPJ_P0081401 Trim28 protein_coding protein_coding MGP_LPJ_T0081402.1 MGP_LPJ_G0031564.1 mouse_genomes_project 7 10520787 10522296 + Trim28 protein_coding retained_intron MGP_LPJ_T0081403.1 MGP_LPJ_G0031564.1 mouse_genomes_project 7 10520999 10521674 + Trim28 protein_coding retained_intron MGP_LPJ_T0081404.1 MGP_LPJ_G0031564.1 mouse_genomes_project 7 10521191 10522771 + Trim28 protein_coding retained_intron MGP_LPJ_T0081405.1 MGP_LPJ_G0031564.1 mouse_genomes_project 7 10521576 10522537 + Trim28 protein_coding retained_intron MGP_LPJ_T0081406.1 MGP_LPJ_G0031564.1 mouse_genomes_project 7 10522051 10523098 + Trim28 protein_coding retained_intron MGP_LPJ_T0081407.1 MGP_LPJ_G0031564.1 mouse_genomes_project 7 10522262 10523167 + Trim28 protein_coding retained_intron MGP_LPJ_T0081408.1 MGP_LPJ_G0031564.1 mouse_genomes_project 7 10522875 10523519 + Trim28 protein_coding retained_intron MGP_LPJ_T0081409.1 MGP_LPJ_G0031564.1 mouse_genomes_project 7 10523543 10524204 + Trim28 protein_coding retained_intron MGP_LPJ_T0005237.1 MGP_LPJ_G0004454.1 mouse_genomes_project 7 45200675 45201400 + Gm44780 antisense antisense MGP_LPJ_T0084543.1 MGP_LPJ_G0032343.1 mouse_genomes_project 7 85172115 85172377 - MGP_LPJ_P0084543 Gm10160 protein_coding protein_coding MGP_LPJ_T0082674.1 MGP_LPJ_G0031919.1 mouse_genomes_project 7 29720342 29724111 + MGP_LPJ_P0082674 Tyrobp protein_coding protein_coding MGP_LPJ_T0002238.1 MGP_LPJ_G0002147.1 mouse_genomes_project 7 36554392 36555934 + TEC TEC MGP_LPJ_T0102378.1 MGP_LPJ_G0040414.1 mouse_genomes_project 7 44845005 44847266 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0102313.1 MGP_LPJ_G0040350.1 mouse_genomes_project 7 9879874 9905998 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0081919.1 MGP_LPJ_G0031730.1 mouse_genomes_project 7 23071422 23080089 + Smg9 protein_coding retained_intron MGP_LPJ_T0081920.1 MGP_LPJ_G0031730.1 mouse_genomes_project 7 23071422 23094644 + MGP_LPJ_P0081920 Smg9 protein_coding protein_coding MGP_LPJ_T0081921.1 MGP_LPJ_G0031730.1 mouse_genomes_project 7 23071525 23077544 + Smg9 protein_coding retained_intron MGP_LPJ_T0081922.1 MGP_LPJ_G0031730.1 mouse_genomes_project 7 23071722 23079263 + MGP_LPJ_P0081922 Smg9 protein_coding protein_coding MGP_LPJ_T0081923.1 MGP_LPJ_G0031730.1 mouse_genomes_project 7 23086464 23092797 + Smg9 protein_coding retained_intron MGP_LPJ_T0081924.1 MGP_LPJ_G0031730.1 mouse_genomes_project 7 23086706 23092797 + MGP_LPJ_P0081924 Smg9 protein_coding protein_coding MGP_LPJ_T0081925.1 MGP_LPJ_G0031730.1 mouse_genomes_project 7 23092067 23094505 + Smg9 protein_coding retained_intron MGP_LPJ_T0081299.1 MGP_LPJ_G0031510.1 mouse_genomes_project 7 3663869 3664814 + MGP_LPJ_P0081299 Olfr1336 protein_coding protein_coding MGP_LPJ_T0005271.1 MGP_LPJ_G0004479.1 mouse_genomes_project 7 86088925 86102035 - 4933406J10Rik antisense antisense MGP_LPJ_T0011703.1 MGP_LPJ_G0009821.1 mouse_genomes_project 7 94840458 94840668 - Gm27470 misc_RNA misc_RNA MGP_LPJ_T0084235.1 MGP_LPJ_G0032286.1 mouse_genomes_project 7 81902980 81912701 - MGP_LPJ_P0084235 Det1 protein_coding protein_coding MGP_LPJ_T0084236.1 MGP_LPJ_G0032286.1 mouse_genomes_project 7 81908772 81921760 - MGP_LPJ_P0084236 Det1 protein_coding protein_coding MGP_LPJ_T0084237.1 MGP_LPJ_G0032286.1 mouse_genomes_project 7 81908774 81925770 - MGP_LPJ_P0084237 Det1 protein_coding protein_coding MGP_LPJ_T0081484.1 MGP_LPJ_G0031595.1 mouse_genomes_project 7 13855959 13866155 - MGP_LPJ_P0081484 Gltscr2 protein_coding protein_coding MGP_LPJ_T0081485.1 MGP_LPJ_G0031595.1 mouse_genomes_project 7 13857603 13866169 - MGP_LPJ_P0081485 Gltscr2 protein_coding protein_coding MGP_LPJ_T0081486.1 MGP_LPJ_G0031595.1 mouse_genomes_project 7 13857614 13865831 - Gltscr2 protein_coding retained_intron MGP_LPJ_T0081487.1 MGP_LPJ_G0031595.1 mouse_genomes_project 7 13862928 13866136 - Gltscr2 protein_coding processed_transcript MGP_LPJ_T0015842.1 MGP_LPJ_G0013933.1 mouse_genomes_project 7 114344210 114345608 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102362.1 MGP_LPJ_G0040398.1 mouse_genomes_project 7 41044297 41057378 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0005222.1 MGP_LPJ_G0004444.1 mouse_genomes_project 7 34031749 34037904 + Gm12764 antisense antisense MGP_LPJ_T0086728.1 MGP_LPJ_G0032986.1 mouse_genomes_project 7 133866173 133873523 + MGP_LPJ_P0086728 Trim72 protein_coding protein_coding MGP_LPJ_T0086729.1 MGP_LPJ_G0032986.1 mouse_genomes_project 7 133866602 133873165 + MGP_LPJ_P0086729 Trim72 protein_coding protein_coding MGP_LPJ_T0002312.1 MGP_LPJ_G0002220.1 mouse_genomes_project 7 96440663 96444294 + TEC TEC MGP_LPJ_T0085280.1 MGP_LPJ_G0032583.1 mouse_genomes_project 7 108190502 108191309 + MGP_LPJ_P0085280 Olfr625-ps1 protein_coding protein_coding MGP_LPJ_T0084369.1 MGP_LPJ_G0032314.1 mouse_genomes_project 7 83477208 83499144 + MGP_LPJ_P0084369 Vps33b protein_coding protein_coding MGP_LPJ_T0084370.1 MGP_LPJ_G0032314.1 mouse_genomes_project 7 83477238 83499142 + MGP_LPJ_P0084370 Vps33b protein_coding nonsense_mediated_decay MGP_LPJ_T0084371.1 MGP_LPJ_G0032314.1 mouse_genomes_project 7 83477293 83493334 + Vps33b protein_coding retained_intron MGP_LPJ_T0084372.1 MGP_LPJ_G0032314.1 mouse_genomes_project 7 83477299 83499140 + MGP_LPJ_P0084372 Vps33b protein_coding nonsense_mediated_decay MGP_LPJ_T0084373.1 MGP_LPJ_G0032314.1 mouse_genomes_project 7 83481910 83491659 + Vps33b protein_coding processed_transcript MGP_LPJ_T0084374.1 MGP_LPJ_G0032314.1 mouse_genomes_project 7 83497596 83499319 + MGP_LPJ_P0084374 Vps33b protein_coding protein_coding MGP_LPJ_T0084375.1 MGP_LPJ_G0032314.1 mouse_genomes_project 7 83497644 83498467 + Vps33b protein_coding retained_intron MGP_LPJ_T0084013.1 MGP_LPJ_G0032245.1 mouse_genomes_project 7 66895420 67140650 + MGP_LPJ_P0084013 Apba2 protein_coding protein_coding MGP_LPJ_T0084014.1 MGP_LPJ_G0032245.1 mouse_genomes_project 7 66895663 67082031 + MGP_LPJ_P0084014 Apba2 protein_coding protein_coding MGP_LPJ_T0084015.1 MGP_LPJ_G0032245.1 mouse_genomes_project 7 66895852 67082095 + MGP_LPJ_P0084015 Apba2 protein_coding protein_coding MGP_LPJ_T0084016.1 MGP_LPJ_G0032245.1 mouse_genomes_project 7 67022581 67140630 + MGP_LPJ_P0084016 Apba2 protein_coding protein_coding MGP_LPJ_T0084017.1 MGP_LPJ_G0032245.1 mouse_genomes_project 7 67116083 67131195 + Apba2 protein_coding processed_transcript MGP_LPJ_T0084018.1 MGP_LPJ_G0032245.1 mouse_genomes_project 7 67130515 67140138 + Apba2 protein_coding processed_transcript MGP_LPJ_T0084019.1 MGP_LPJ_G0032245.1 mouse_genomes_project 7 67131259 67140177 + MGP_LPJ_P0084019 Apba2 protein_coding protein_coding MGP_LPJ_T0102417.1 MGP_LPJ_G0040453.1 mouse_genomes_project 7 88765960 88803785 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0100969.1 MGP_LPJ_G0039232.1 mouse_genomes_project 7 61923356 61923426 - Snord107 snoRNA snoRNA MGP_LPJ_T0085922.1 MGP_LPJ_G0032827.1 mouse_genomes_project 7 124834311 124851402 - MGP_LPJ_P0085922 Umod protein_coding protein_coding MGP_LPJ_T0084852.1 MGP_LPJ_G0032442.1 mouse_genomes_project 7 102165335 102227349 - MGP_LPJ_P0084852 Capn5 protein_coding protein_coding MGP_LPJ_T0084853.1 MGP_LPJ_G0032442.1 mouse_genomes_project 7 102167437 102207692 - MGP_LPJ_P0084853 Capn5 protein_coding protein_coding MGP_LPJ_T0084855.1 MGP_LPJ_G0032442.1 mouse_genomes_project 7 102190975 102207560 - Capn5 protein_coding processed_transcript MGP_LPJ_T0084856.1 MGP_LPJ_G0032442.1 mouse_genomes_project 7 102207330 102210230 - MGP_LPJ_P0084856 Capn5 protein_coding protein_coding MGP_LPJ_T0084857.1 MGP_LPJ_G0032442.1 mouse_genomes_project 7 102207347 102210709 - MGP_LPJ_P0084857 Capn5 protein_coding protein_coding MGP_LPJ_T0099713.1 MGP_LPJ_G0037976.1 mouse_genomes_project 7 65919200 65919301 + Gm22228 snRNA snRNA MGP_LPJ_T0015711.1 MGP_LPJ_G0013802.1 mouse_genomes_project 7 33154337 33154805 + processed_pseudogene processed_pseudogene MGP_LPJ_T0086032.1 MGP_LPJ_G0032860.1 mouse_genomes_project 7 127136983 127203417 - MGP_LPJ_P0086032 Usp31 protein_coding protein_coding MGP_LPJ_T0086033.1 MGP_LPJ_G0032860.1 mouse_genomes_project 7 127153734 127163027 - Usp31 protein_coding retained_intron MGP_LPJ_T0081325.1 MGP_LPJ_G0031528.1 mouse_genomes_project 7 7802058 7810224 - MGP_LPJ_P0081325 Zik1 protein_coding protein_coding MGP_LPJ_T0087056.1 MGP_LPJ_G0033059.1 mouse_genomes_project 7 145392553 145419802 + Ppp2r2d protein_coding retained_intron MGP_LPJ_T0087057.1 MGP_LPJ_G0033059.1 mouse_genomes_project 7 145392860 145417884 + MGP_LPJ_P0087057 Ppp2r2d protein_coding nonsense_mediated_decay MGP_LPJ_T0087058.1 MGP_LPJ_G0033059.1 mouse_genomes_project 7 145392983 145431146 + MGP_LPJ_P0087058 Ppp2r2d protein_coding protein_coding MGP_LPJ_T0087059.1 MGP_LPJ_G0033059.1 mouse_genomes_project 7 145393061 145417927 + Ppp2r2d protein_coding processed_transcript MGP_LPJ_T0087060.1 MGP_LPJ_G0033059.1 mouse_genomes_project 7 145393094 145424668 + MGP_LPJ_P0087060 Ppp2r2d protein_coding nonsense_mediated_decay MGP_LPJ_T0087061.1 MGP_LPJ_G0033059.1 mouse_genomes_project 7 145393334 145417902 + Ppp2r2d protein_coding processed_transcript MGP_LPJ_T0087062.1 MGP_LPJ_G0033059.1 mouse_genomes_project 7 145416509 145424662 + MGP_LPJ_P0087062 Ppp2r2d protein_coding nonsense_mediated_decay MGP_LPJ_T0086326.1 MGP_LPJ_G0032912.1 mouse_genomes_project 7 132526686 132531929 + MGP_LPJ_P0086326 Mapk3 protein_coding protein_coding MGP_LPJ_T0086327.1 MGP_LPJ_G0032912.1 mouse_genomes_project 7 132526731 132532898 + MGP_LPJ_P0086327 Mapk3 protein_coding protein_coding MGP_LPJ_T0086328.1 MGP_LPJ_G0032912.1 mouse_genomes_project 7 132526736 132531928 + MGP_LPJ_P0086328 Mapk3 protein_coding protein_coding MGP_LPJ_T0086329.1 MGP_LPJ_G0032912.1 mouse_genomes_project 7 132526745 132528093 + Mapk3 protein_coding retained_intron MGP_LPJ_T0086330.1 MGP_LPJ_G0032912.1 mouse_genomes_project 7 132526919 132530243 + Mapk3 protein_coding processed_transcript MGP_LPJ_T0086331.1 MGP_LPJ_G0032912.1 mouse_genomes_project 7 132527834 132531656 + MGP_LPJ_P0086331 Mapk3 protein_coding protein_coding MGP_LPJ_T0086332.1 MGP_LPJ_G0032912.1 mouse_genomes_project 7 132530360 132531444 + Mapk3 protein_coding retained_intron MGP_LPJ_T0085996.1 MGP_LPJ_G0032850.1 mouse_genomes_project 7 126183189 126253243 + MGP_LPJ_P0085996 Vwa3a protein_coding protein_coding MGP_LPJ_T0085997.1 MGP_LPJ_G0032850.1 mouse_genomes_project 7 126183189 126237202 + MGP_LPJ_P0085997 Vwa3a protein_coding nonsense_mediated_decay MGP_LPJ_T0085998.1 MGP_LPJ_G0032850.1 mouse_genomes_project 7 126183679 126253442 + MGP_LPJ_P0085998 Vwa3a protein_coding protein_coding MGP_LPJ_T0085999.1 MGP_LPJ_G0032850.1 mouse_genomes_project 7 126183679 126253240 + MGP_LPJ_P0085999 Vwa3a protein_coding protein_coding MGP_LPJ_T0086000.1 MGP_LPJ_G0032850.1 mouse_genomes_project 7 126198479 126252702 + MGP_LPJ_P0086000 Vwa3a protein_coding unknown_likely_coding MGP_LPJ_T0086001.1 MGP_LPJ_G0032850.1 mouse_genomes_project 7 126229169 126237203 + MGP_LPJ_P0086001 Vwa3a protein_coding protein_coding MGP_LPJ_T0086002.1 MGP_LPJ_G0032850.1 mouse_genomes_project 7 126230827 126237203 + Vwa3a protein_coding processed_transcript MGP_LPJ_T0086003.1 MGP_LPJ_G0032850.1 mouse_genomes_project 7 126233257 126239719 + MGP_LPJ_P0086003 Vwa3a protein_coding protein_coding MGP_LPJ_T0081813.1 MGP_LPJ_G0031694.1 mouse_genomes_project 7 18040832 18043989 - MGP_LPJ_P0081813 Apoc1 protein_coding protein_coding MGP_LPJ_T0081814.1 MGP_LPJ_G0031694.1 mouse_genomes_project 7 18040832 18044051 - MGP_LPJ_P0081814 Apoc1 protein_coding protein_coding MGP_LPJ_T0084669.1 MGP_LPJ_G0032400.1 mouse_genomes_project 7 91903511 91937269 + MGP_LPJ_P0084669 Ctsc protein_coding protein_coding MGP_LPJ_T0084670.1 MGP_LPJ_G0032400.1 mouse_genomes_project 7 91903560 91934402 + MGP_LPJ_P0084670 Ctsc protein_coding protein_coding MGP_LPJ_T0084671.1 MGP_LPJ_G0032400.1 mouse_genomes_project 7 91903564 91907059 + Ctsc protein_coding retained_intron MGP_LPJ_T0084672.1 MGP_LPJ_G0032400.1 mouse_genomes_project 7 91903564 91916667 + Ctsc protein_coding retained_intron MGP_LPJ_T0084673.1 MGP_LPJ_G0032400.1 mouse_genomes_project 7 91922133 91928687 + Ctsc protein_coding retained_intron MGP_LPJ_T0010891.1 MGP_LPJ_G0009009.1 mouse_genomes_project 7 46093837 46093896 + Mir7055 miRNA miRNA MGP_LPJ_T0083620.1 MGP_LPJ_G0032142.1 mouse_genomes_project 7 46634849 46646500 + MGP_LPJ_P0083620 Rasip1 protein_coding protein_coding MGP_LPJ_T0015782.1 MGP_LPJ_G0013873.1 mouse_genomes_project 7 73106710 73107720 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008851.1 MGP_LPJ_G0007152.1 mouse_genomes_project 7 35525061 35533783 + Gm26790 lincRNA lincRNA MGP_LPJ_T0084425.1 MGP_LPJ_G0032320.1 mouse_genomes_project 7 83589110 83599286 - MGP_LPJ_P0084425 Fes protein_coding nonsense_mediated_decay MGP_LPJ_T0084426.1 MGP_LPJ_G0032320.1 mouse_genomes_project 7 83589112 83591790 - Fes protein_coding retained_intron MGP_LPJ_T0084427.1 MGP_LPJ_G0032320.1 mouse_genomes_project 7 83589112 83599296 - MGP_LPJ_P0084427 Fes protein_coding protein_coding MGP_LPJ_T0084428.1 MGP_LPJ_G0032320.1 mouse_genomes_project 7 83589112 83590984 - MGP_LPJ_P0084428 Fes protein_coding protein_coding MGP_LPJ_T0084429.1 MGP_LPJ_G0032320.1 mouse_genomes_project 7 83589117 83599221 - MGP_LPJ_P0084429 Fes protein_coding nonsense_mediated_decay MGP_LPJ_T0084430.1 MGP_LPJ_G0032320.1 mouse_genomes_project 7 83589118 83599291 - MGP_LPJ_P0084430 Fes protein_coding nonsense_mediated_decay MGP_LPJ_T0084431.1 MGP_LPJ_G0032320.1 mouse_genomes_project 7 83589127 83598769 - MGP_LPJ_P0084431 Fes protein_coding protein_coding MGP_LPJ_T0084432.1 MGP_LPJ_G0032320.1 mouse_genomes_project 7 83595563 83599245 - MGP_LPJ_P0084432 Fes protein_coding nonsense_mediated_decay MGP_LPJ_T0084433.1 MGP_LPJ_G0032320.1 mouse_genomes_project 7 83598262 83599231 - MGP_LPJ_P0084433 Fes protein_coding protein_coding MGP_LPJ_T0084434.1 MGP_LPJ_G0032320.1 mouse_genomes_project 7 83598388 83599244 - Fes protein_coding retained_intron MGP_LPJ_T0015680.1 MGP_LPJ_G0013771.1 mouse_genomes_project 7 16102944 16103643 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098054.1 MGP_LPJ_G0036335.1 mouse_genomes_project 7 106165203 106165816 + pseudogene pseudogene MGP_LPJ_T0008904.1 MGP_LPJ_G0007191.1 mouse_genomes_project 7 69679490 69698559 - 1700112J16Rik lincRNA lincRNA MGP_LPJ_T0010854.1 MGP_LPJ_G0008972.1 mouse_genomes_project 7 2194128 2194206 - Gm26217 miRNA miRNA MGP_LPJ_T0086490.1 MGP_LPJ_G0032940.1 mouse_genomes_project 7 132988997 132993338 - MGP_LPJ_P0086490 Cd2bp2 protein_coding protein_coding MGP_LPJ_T0086491.1 MGP_LPJ_G0032940.1 mouse_genomes_project 7 132989333 132993276 - MGP_LPJ_P0086491 Cd2bp2 protein_coding protein_coding MGP_LPJ_T0086492.1 MGP_LPJ_G0032940.1 mouse_genomes_project 7 132989360 132993287 - Cd2bp2 protein_coding retained_intron MGP_LPJ_T0086493.1 MGP_LPJ_G0032940.1 mouse_genomes_project 7 132989362 132993325 - MGP_LPJ_P0086493 Cd2bp2 protein_coding protein_coding MGP_LPJ_T0086494.1 MGP_LPJ_G0032940.1 mouse_genomes_project 7 132990995 132993213 - MGP_LPJ_P0086494 Cd2bp2 protein_coding protein_coding MGP_LPJ_T0086495.1 MGP_LPJ_G0032940.1 mouse_genomes_project 7 132991799 132992782 - MGP_LPJ_P0086495 Cd2bp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0086496.1 MGP_LPJ_G0032940.1 mouse_genomes_project 7 132991864 132993280 - MGP_LPJ_P0086496 Cd2bp2 protein_coding protein_coding MGP_LPJ_T0086497.1 MGP_LPJ_G0032940.1 mouse_genomes_project 7 132991959 132993304 - MGP_LPJ_P0086497 Cd2bp2 protein_coding protein_coding MGP_LPJ_T0086498.1 MGP_LPJ_G0032940.1 mouse_genomes_project 7 132992429 132993388 - MGP_LPJ_P0086498 Cd2bp2 protein_coding protein_coding MGP_LPJ_T0015689.1 MGP_LPJ_G0013780.1 mouse_genomes_project 7 23426792 23426995 - processed_pseudogene processed_pseudogene MGP_LPJ_T0087014.1 MGP_LPJ_G0033042.1 mouse_genomes_project 7 140062130 140175888 + MGP_LPJ_P0087014 Fank1 protein_coding protein_coding MGP_LPJ_T0087015.1 MGP_LPJ_G0033042.1 mouse_genomes_project 7 140062160 140171251 + MGP_LPJ_P0087015 Fank1 protein_coding protein_coding MGP_LPJ_T0087016.1 MGP_LPJ_G0033042.1 mouse_genomes_project 7 140062211 140175221 + MGP_LPJ_P0087016 Fank1 protein_coding protein_coding MGP_LPJ_T0081648.1 MGP_LPJ_G0031647.1 mouse_genomes_project 7 17087067 17098219 - MGP_LPJ_P0081648 Psg17 protein_coding protein_coding MGP_LPJ_T0083492.1 MGP_LPJ_G0032113.1 mouse_genomes_project 7 46096832 46100091 - MGP_LPJ_P0083492 Gfy protein_coding protein_coding MGP_LPJ_T0087410.1 MGP_LPJ_G0033150.1 mouse_genomes_project 7 148152760 148156883 + MGP_LPJ_P0087410 Cd151 protein_coding protein_coding MGP_LPJ_T0087411.1 MGP_LPJ_G0033150.1 mouse_genomes_project 7 148152760 148156883 + MGP_LPJ_P0087411 Cd151 protein_coding protein_coding MGP_LPJ_T0087412.1 MGP_LPJ_G0033150.1 mouse_genomes_project 7 148154187 148156883 + MGP_LPJ_P0087412 Cd151 protein_coding protein_coding MGP_LPJ_T0098300.1 MGP_LPJ_G0036581.1 mouse_genomes_project 7 18408063 18408182 - n-R5s152 rRNA rRNA MGP_LPJ_T0098672.1 MGP_LPJ_G0036941.1 mouse_genomes_project 7 128556238 128556822 + Gm20274 sense_intronic sense_intronic MGP_LPJ_T0102412.1 MGP_LPJ_G0040448.1 mouse_genomes_project 7 88492083 88492603 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0083238.1 MGP_LPJ_G0032041.1 mouse_genomes_project 7 44480314 44495290 + MGP_LPJ_P0083238 Klk13 protein_coding protein_coding MGP_LPJ_T0083239.1 MGP_LPJ_G0032041.1 mouse_genomes_project 7 44481146 44489063 + MGP_LPJ_P0083239 Klk13 protein_coding protein_coding MGP_LPJ_T0083240.1 MGP_LPJ_G0032041.1 mouse_genomes_project 7 44482706 44491621 + MGP_LPJ_P0083240 Klk13 protein_coding protein_coding MGP_LPJ_T0087270.1 MGP_LPJ_G0033130.1 mouse_genomes_project 7 147861593 147866449 - MGP_LPJ_P0087270 Hras protein_coding protein_coding MGP_LPJ_T0087271.1 MGP_LPJ_G0033130.1 mouse_genomes_project 7 147862422 147866493 - MGP_LPJ_P0087271 Hras protein_coding protein_coding MGP_LPJ_T0087272.1 MGP_LPJ_G0033130.1 mouse_genomes_project 7 147863414 147866483 - Hras protein_coding retained_intron MGP_LPJ_T0087273.1 MGP_LPJ_G0033130.1 mouse_genomes_project 7 147863414 147866494 - MGP_LPJ_P0087273 Hras protein_coding protein_coding MGP_LPJ_T0087274.1 MGP_LPJ_G0033130.1 mouse_genomes_project 7 147863415 147864993 - Hras protein_coding processed_transcript MGP_LPJ_T0087275.1 MGP_LPJ_G0033130.1 mouse_genomes_project 7 147863418 147864466 - Hras protein_coding processed_transcript MGP_LPJ_T0087276.1 MGP_LPJ_G0033130.1 mouse_genomes_project 7 147863418 147866371 - MGP_LPJ_P0087276 Hras protein_coding nonsense_mediated_decay MGP_LPJ_T0101610.1 MGP_LPJ_G0039686.1 mouse_genomes_project 7 41840068 41840537 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0010911.1 MGP_LPJ_G0009029.1 mouse_genomes_project 7 64136929 64137024 - Mir344 miRNA miRNA MGP_LPJ_T0102385.1 MGP_LPJ_G0040421.1 mouse_genomes_project 7 44941367 44954464 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0102285.1 MGP_LPJ_G0040322.1 mouse_genomes_project 7 154979 155823 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0015749.1 MGP_LPJ_G0013840.1 mouse_genomes_project 7 44638146 44638451 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011700.1 MGP_LPJ_G0009818.1 mouse_genomes_project 7 77840566 77840917 - Gm22326 misc_RNA misc_RNA MGP_LPJ_T0083634.1 MGP_LPJ_G0032148.1 mouse_genomes_project 7 46718313 46723381 + MGP_LPJ_P0083634 Dbp protein_coding protein_coding MGP_LPJ_T0083635.1 MGP_LPJ_G0032148.1 mouse_genomes_project 7 46718849 46723340 + MGP_LPJ_P0083635 Dbp protein_coding protein_coding MGP_LPJ_T0083636.1 MGP_LPJ_G0032148.1 mouse_genomes_project 7 46718849 46723340 + MGP_LPJ_P0083636 Dbp protein_coding protein_coding MGP_LPJ_T0083637.1 MGP_LPJ_G0032148.1 mouse_genomes_project 7 46720329 46723254 + Dbp protein_coding retained_intron MGP_LPJ_T0083638.1 MGP_LPJ_G0032148.1 mouse_genomes_project 7 46721114 46723122 + Dbp protein_coding retained_intron MGP_LPJ_T0084564.1 MGP_LPJ_G0032348.1 mouse_genomes_project 7 85659685 85664016 + Adamtsl3 protein_coding processed_transcript MGP_LPJ_T0084565.1 MGP_LPJ_G0032348.1 mouse_genomes_project 7 85659723 85953618 + MGP_LPJ_P0084565 Adamtsl3 protein_coding protein_coding MGP_LPJ_T0084566.1 MGP_LPJ_G0032348.1 mouse_genomes_project 7 85661209 85951600 + MGP_LPJ_P0084566 Adamtsl3 protein_coding protein_coding MGP_LPJ_T0084567.1 MGP_LPJ_G0032348.1 mouse_genomes_project 7 85735572 85798897 + Adamtsl3 protein_coding retained_intron MGP_LPJ_T0084568.1 MGP_LPJ_G0032348.1 mouse_genomes_project 7 85950946 85951943 + MGP_LPJ_P0084568 Adamtsl3 protein_coding protein_coding MGP_LPJ_T0086051.1 MGP_LPJ_G0032866.1 mouse_genomes_project 7 127577813 127592845 + MGP_LPJ_P0086051 Ubfd1 protein_coding protein_coding MGP_LPJ_T0086052.1 MGP_LPJ_G0032866.1 mouse_genomes_project 7 127577846 127588276 + Ubfd1 protein_coding retained_intron MGP_LPJ_T0086053.1 MGP_LPJ_G0032866.1 mouse_genomes_project 7 127578078 127582054 + Ubfd1 protein_coding retained_intron MGP_LPJ_T0086054.1 MGP_LPJ_G0032866.1 mouse_genomes_project 7 127578085 127579618 + Ubfd1 protein_coding processed_transcript MGP_LPJ_T0086055.1 MGP_LPJ_G0032866.1 mouse_genomes_project 7 127579537 127589264 + MGP_LPJ_P0086055 Ubfd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0002259.1 MGP_LPJ_G0002168.1 mouse_genomes_project 7 57118017 57120240 + TEC TEC MGP_LPJ_T0084522.1 MGP_LPJ_G0032335.1 mouse_genomes_project 7 84756129 84761026 - Ap3b2 protein_coding retained_intron MGP_LPJ_T0084523.1 MGP_LPJ_G0032335.1 mouse_genomes_project 7 84756131 84790902 - MGP_LPJ_P0084523 Ap3b2 protein_coding protein_coding MGP_LPJ_T0084524.1 MGP_LPJ_G0032335.1 mouse_genomes_project 7 84770122 84790683 - Ap3b2 protein_coding retained_intron MGP_LPJ_T0084525.1 MGP_LPJ_G0032335.1 mouse_genomes_project 7 84772897 84774185 - Ap3b2 protein_coding processed_transcript MGP_LPJ_T0084526.1 MGP_LPJ_G0032335.1 mouse_genomes_project 7 84775422 84790760 - MGP_LPJ_P0084526 Ap3b2 protein_coding protein_coding MGP_LPJ_T0083470.1 MGP_LPJ_G0032102.1 mouse_genomes_project 7 45928502 45957685 - MGP_LPJ_P0083470 Prr12 protein_coding protein_coding MGP_LPJ_T0005253.1 MGP_LPJ_G0004466.1 mouse_genomes_project 7 76328344 76345726 + Gm44686 antisense antisense MGP_LPJ_T0083509.1 MGP_LPJ_G0032118.1 mouse_genomes_project 7 46159246 46164468 - MGP_LPJ_P0083509 Cd37 protein_coding protein_coding MGP_LPJ_T0083510.1 MGP_LPJ_G0032118.1 mouse_genomes_project 7 46159251 46164443 - Cd37 protein_coding retained_intron MGP_LPJ_T0083511.1 MGP_LPJ_G0032118.1 mouse_genomes_project 7 46159255 46164743 - MGP_LPJ_P0083511 Cd37 protein_coding protein_coding MGP_LPJ_T0083512.1 MGP_LPJ_G0032118.1 mouse_genomes_project 7 46159257 46161114 - Cd37 protein_coding processed_transcript MGP_LPJ_T0083513.1 MGP_LPJ_G0032118.1 mouse_genomes_project 7 46159505 46162702 - Cd37 protein_coding processed_transcript MGP_LPJ_T0083514.1 MGP_LPJ_G0032118.1 mouse_genomes_project 7 46159784 46164502 - MGP_LPJ_P0083514 Cd37 protein_coding protein_coding MGP_LPJ_T0083515.1 MGP_LPJ_G0032118.1 mouse_genomes_project 7 46159964 46161073 - Cd37 protein_coding processed_transcript MGP_LPJ_T0083516.1 MGP_LPJ_G0032118.1 mouse_genomes_project 7 46160352 46164685 - MGP_LPJ_P0083516 Cd37 protein_coding protein_coding MGP_LPJ_T0083517.1 MGP_LPJ_G0032118.1 mouse_genomes_project 7 46163361 46164424 - Cd37 protein_coding retained_intron MGP_LPJ_T0086661.1 MGP_LPJ_G0032973.1 mouse_genomes_project 7 133653851 133674281 - MGP_LPJ_P0086661 protein_coding unknown_likely_coding MGP_LPJ_T0086662.1 MGP_LPJ_G0032973.1 mouse_genomes_project 7 133653914 133657467 - MGP_LPJ_P0086662 protein_coding protein_coding MGP_LPJ_T0018286.1 MGP_LPJ_G0015577.1 mouse_genomes_project 7 28808130 28813303 - A330087D11Rik processed_transcript processed_transcript MGP_LPJ_T0086695.1 MGP_LPJ_G0032981.1 mouse_genomes_project 7 133769148 133772723 + Kat8 protein_coding retained_intron MGP_LPJ_T0086696.1 MGP_LPJ_G0032981.1 mouse_genomes_project 7 133769148 133782416 + MGP_LPJ_P0086696 Kat8 protein_coding protein_coding MGP_LPJ_T0086697.1 MGP_LPJ_G0032981.1 mouse_genomes_project 7 133770787 133777090 + MGP_LPJ_P0086697 Kat8 protein_coding protein_coding MGP_LPJ_T0086698.1 MGP_LPJ_G0032981.1 mouse_genomes_project 7 133776366 133777158 + Kat8 protein_coding retained_intron MGP_LPJ_T0018357.1 MGP_LPJ_G0015603.1 mouse_genomes_project 7 117701188 117775064 - 2310014F06Rik processed_transcript processed_transcript MGP_LPJ_T0082470.1 MGP_LPJ_G0031870.1 mouse_genomes_project 7 28155685 28169307 - MGP_LPJ_P0082470 Eif3k protein_coding protein_coding MGP_LPJ_T0081470.1 MGP_LPJ_G0031589.1 mouse_genomes_project 7 12326314 12345903 + MGP_LPJ_P0081470 Obox7 protein_coding protein_coding MGP_LPJ_T0081471.1 MGP_LPJ_G0031589.1 mouse_genomes_project 7 12326551 12345903 + MGP_LPJ_P0081471 Obox7 protein_coding protein_coding MGP_LPJ_T0081472.1 MGP_LPJ_G0031589.1 mouse_genomes_project 7 12326563 12344481 + MGP_LPJ_P0081472 Obox7 protein_coding protein_coding MGP_LPJ_T0005175.1 MGP_LPJ_G0004410.1 mouse_genomes_project 7 14584020 14609178 + Gm29443 antisense antisense MGP_LPJ_T0005176.1 MGP_LPJ_G0004410.1 mouse_genomes_project 7 14584237 14609277 + Gm29443 antisense antisense MGP_LPJ_T0101004.1 MGP_LPJ_G0039267.1 mouse_genomes_project 7 148865509 148865603 + Gm25370 snoRNA snoRNA MGP_LPJ_T0099738.1 MGP_LPJ_G0038001.1 mouse_genomes_project 7 128959876 128959979 - Gm23559 snRNA snRNA MGP_LPJ_T0083456.1 MGP_LPJ_G0032095.1 mouse_genomes_project 7 45855343 45875155 - MGP_LPJ_P0083456 Cpt1c protein_coding protein_coding MGP_LPJ_T0102463.1 MGP_LPJ_G0040499.1 mouse_genomes_project 7 110500341 111451445 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0005334.1 MGP_LPJ_G0004525.1 mouse_genomes_project 7 148303690 148307372 - Gm16982 antisense antisense MGP_LPJ_T0081752.1 MGP_LPJ_G0031675.1 mouse_genomes_project 7 17674300 17681042 - MGP_LPJ_P0081752 Cd3eap protein_coding protein_coding MGP_LPJ_T0081753.1 MGP_LPJ_G0031675.1 mouse_genomes_project 7 17676286 17681044 - Cd3eap protein_coding retained_intron MGP_LPJ_T0082505.1 MGP_LPJ_G0031877.1 mouse_genomes_project 7 28372838 28380624 - MGP_LPJ_P0082505 Psmd8 protein_coding protein_coding MGP_LPJ_T0082506.1 MGP_LPJ_G0031877.1 mouse_genomes_project 7 28372838 28380745 - MGP_LPJ_P0082506 Psmd8 protein_coding protein_coding MGP_LPJ_T0082507.1 MGP_LPJ_G0031877.1 mouse_genomes_project 7 28372838 28380773 - MGP_LPJ_P0082507 Psmd8 protein_coding protein_coding MGP_LPJ_T0085543.1 MGP_LPJ_G0032720.1 mouse_genomes_project 7 112895671 112896825 + MGP_LPJ_P0085543 Olfr476 protein_coding protein_coding MGP_LPJ_T0084963.1 MGP_LPJ_G0032474.1 mouse_genomes_project 7 104515570 104551528 + MGP_LPJ_P0084963 P4ha3 protein_coding protein_coding MGP_LPJ_T0084964.1 MGP_LPJ_G0032474.1 mouse_genomes_project 7 104515570 104551528 + MGP_LPJ_P0084964 P4ha3 protein_coding nonsense_mediated_decay MGP_LPJ_T0084965.1 MGP_LPJ_G0032474.1 mouse_genomes_project 7 104515592 104528651 + P4ha3 protein_coding retained_intron MGP_LPJ_T0084966.1 MGP_LPJ_G0032474.1 mouse_genomes_project 7 104523833 104551527 + MGP_LPJ_P0084966 P4ha3 protein_coding protein_coding MGP_LPJ_T0082503.1 MGP_LPJ_G0031876.1 mouse_genomes_project 7 28368870 28372584 + MGP_LPJ_P0082503 Ggn protein_coding protein_coding MGP_LPJ_T0082504.1 MGP_LPJ_G0031876.1 mouse_genomes_project 7 28369040 28372563 + MGP_LPJ_P0082504 Ggn protein_coding protein_coding MGP_LPJ_T0084020.1 MGP_LPJ_G0032246.1 mouse_genomes_project 7 67144411 67577973 - MGP_LPJ_P0084020 Fam189a1 protein_coding protein_coding MGP_LPJ_T0084021.1 MGP_LPJ_G0032246.1 mouse_genomes_project 7 67144433 67161965 - Fam189a1 protein_coding processed_transcript MGP_LPJ_T0084022.1 MGP_LPJ_G0032246.1 mouse_genomes_project 7 67156040 67323015 - MGP_LPJ_P0084022 Fam189a1 protein_coding protein_coding MGP_LPJ_T0084023.1 MGP_LPJ_G0032246.1 mouse_genomes_project 7 67175002 67577819 - MGP_LPJ_P0084023 Fam189a1 protein_coding protein_coding MGP_LPJ_T0084024.1 MGP_LPJ_G0032246.1 mouse_genomes_project 7 67215360 67250220 - Fam189a1 protein_coding retained_intron MGP_LPJ_T0082152.1 MGP_LPJ_G0031785.1 mouse_genomes_project 7 24764174 24805652 + MGP_LPJ_P0082152 protein_coding protein_coding MGP_LPJ_T0005218.1 MGP_LPJ_G0004442.1 mouse_genomes_project 7 30558764 30567672 + Gm10640 antisense antisense MGP_LPJ_T0005219.1 MGP_LPJ_G0004442.1 mouse_genomes_project 7 30566480 30575228 + Gm10640 antisense antisense MGP_LPJ_T0015709.1 MGP_LPJ_G0013800.1 mouse_genomes_project 7 32391348 32391483 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015673.1 MGP_LPJ_G0013764.1 mouse_genomes_project 7 14482438 14483177 - processed_pseudogene processed_pseudogene MGP_LPJ_T0082809.1 MGP_LPJ_G0031948.1 mouse_genomes_project 7 30165675 30171132 - MGP_LPJ_P0082809 Ffar2 protein_coding protein_coding MGP_LPJ_T0082810.1 MGP_LPJ_G0031948.1 mouse_genomes_project 7 30165684 30168467 - MGP_LPJ_P0082810 Ffar2 protein_coding protein_coding MGP_LPJ_T0082811.1 MGP_LPJ_G0031948.1 mouse_genomes_project 7 30166443 30169002 - MGP_LPJ_P0082811 Ffar2 protein_coding protein_coding MGP_LPJ_T0082812.1 MGP_LPJ_G0031948.1 mouse_genomes_project 7 30166895 30168466 - MGP_LPJ_P0082812 Ffar2 protein_coding protein_coding MGP_LPJ_T0082813.1 MGP_LPJ_G0031948.1 mouse_genomes_project 7 30167013 30168305 - MGP_LPJ_P0082813 Ffar2 protein_coding protein_coding MGP_LPJ_T0082814.1 MGP_LPJ_G0031948.1 mouse_genomes_project 7 30167040 30168475 - MGP_LPJ_P0082814 Ffar2 protein_coding protein_coding MGP_LPJ_T0081252.1 MGP_LPJ_G0031490.1 mouse_genomes_project 7 2173715 2180834 - MGP_LPJ_P0081252 Rfpl4 protein_coding protein_coding MGP_LPJ_T0081253.1 MGP_LPJ_G0031490.1 mouse_genomes_project 7 2173715 2180834 - MGP_LPJ_P0081253 Rfpl4 protein_coding protein_coding MGP_LPJ_T0085238.1 MGP_LPJ_G0032545.1 mouse_genomes_project 7 107361264 107362221 - MGP_LPJ_P0085238 Olfr575 protein_coding protein_coding MGP_LPJ_T0081653.1 MGP_LPJ_G0031649.1 mouse_genomes_project 7 17153218 17171165 + Pglyrp1 protein_coding processed_transcript MGP_LPJ_T0081654.1 MGP_LPJ_G0031649.1 mouse_genomes_project 7 17153218 17172226 + Pglyrp1 protein_coding processed_transcript MGP_LPJ_T0081655.1 MGP_LPJ_G0031649.1 mouse_genomes_project 7 17166152 17172208 + MGP_LPJ_P0081655 Pglyrp1 protein_coding protein_coding MGP_LPJ_T0081656.1 MGP_LPJ_G0031649.1 mouse_genomes_project 7 17166165 17167192 + Pglyrp1 protein_coding retained_intron MGP_LPJ_T0015792.1 MGP_LPJ_G0013883.1 mouse_genomes_project 7 78705037 78705389 + processed_pseudogene processed_pseudogene MGP_LPJ_T0087036.1 MGP_LPJ_G0033050.1 mouse_genomes_project 7 141904109 141922381 - MGP_LPJ_P0087036 Clrn3 protein_coding protein_coding MGP_LPJ_T0085461.1 MGP_LPJ_G0032674.1 mouse_genomes_project 7 110406216 110412183 - MGP_LPJ_P0085461 Rrp8 protein_coding protein_coding MGP_LPJ_T0085462.1 MGP_LPJ_G0032674.1 mouse_genomes_project 7 110406413 110412778 - MGP_LPJ_P0085462 Rrp8 protein_coding protein_coding MGP_LPJ_T0085463.1 MGP_LPJ_G0032674.1 mouse_genomes_project 7 110406649 110407691 - Rrp8 protein_coding retained_intron MGP_LPJ_T0085464.1 MGP_LPJ_G0032674.1 mouse_genomes_project 7 110407015 110408073 - Rrp8 protein_coding processed_transcript MGP_LPJ_T0085465.1 MGP_LPJ_G0032674.1 mouse_genomes_project 7 110407015 110407956 - Rrp8 protein_coding retained_intron MGP_LPJ_T0085466.1 MGP_LPJ_G0032674.1 mouse_genomes_project 7 110408701 110411775 - Rrp8 protein_coding processed_transcript MGP_LPJ_T0081393.1 MGP_LPJ_G0031562.1 mouse_genomes_project 7 10479277 10490357 - MGP_LPJ_P0081393 Slc27a5 protein_coding unknown_likely_coding MGP_LPJ_T0081394.1 MGP_LPJ_G0031562.1 mouse_genomes_project 7 10479280 10480073 - Slc27a5 protein_coding processed_transcript MGP_LPJ_T0081395.1 MGP_LPJ_G0031562.1 mouse_genomes_project 7 10479280 10490619 - MGP_LPJ_P0081395 Slc27a5 protein_coding protein_coding MGP_LPJ_T0081396.1 MGP_LPJ_G0031562.1 mouse_genomes_project 7 10479286 10490661 - MGP_LPJ_P0081396 Slc27a5 protein_coding protein_coding MGP_LPJ_T0081397.1 MGP_LPJ_G0031562.1 mouse_genomes_project 7 10484867 10489030 - Slc27a5 protein_coding retained_intron MGP_LPJ_T0081398.1 MGP_LPJ_G0031562.1 mouse_genomes_project 7 10484867 10490146 - MGP_LPJ_P0081398 Slc27a5 protein_coding protein_coding MGP_LPJ_T0005191.1 MGP_LPJ_G0004421.1 mouse_genomes_project 7 23328560 23335415 - Gm26550 antisense antisense MGP_LPJ_T0002271.1 MGP_LPJ_G0002180.1 mouse_genomes_project 7 66910475 66911080 + TEC TEC MGP_LPJ_T0081241.1 MGP_LPJ_G0031486.1 mouse_genomes_project 7 2118338 2122676 + MGP_LPJ_P0081241 protein_coding protein_coding MGP_LPJ_T0084942.1 MGP_LPJ_G0032468.1 mouse_genomes_project 7 104123416 104193191 - MGP_LPJ_P0084942 Rnf169 protein_coding protein_coding MGP_LPJ_T0084943.1 MGP_LPJ_G0032468.1 mouse_genomes_project 7 104138421 104172036 - Rnf169 protein_coding processed_transcript MGP_LPJ_T0082316.1 MGP_LPJ_G0031826.1 mouse_genomes_project 7 26859286 26878243 + MGP_LPJ_P0082316 protein_coding protein_coding MGP_LPJ_T0082317.1 MGP_LPJ_G0031826.1 mouse_genomes_project 7 26864655 26872512 + MGP_LPJ_P0082317 protein_coding protein_coding MGP_LPJ_T0005258.1 MGP_LPJ_G0004470.1 mouse_genomes_project 7 82117296 82157204 - Gm26633 antisense antisense MGP_LPJ_T0081383.1 MGP_LPJ_G0031559.1 mouse_genomes_project 7 10417326 10420983 + MGP_LPJ_P0081383 Rnf225 protein_coding protein_coding MGP_LPJ_T0086647.1 MGP_LPJ_G0032971.1 mouse_genomes_project 7 133631295 133650347 + MGP_LPJ_P0086647 protein_coding nonsense_mediated_decay MGP_LPJ_T0086648.1 MGP_LPJ_G0032971.1 mouse_genomes_project 7 133645919 133648567 + MGP_LPJ_P0086648 protein_coding nonsense_mediated_decay MGP_LPJ_T0085923.1 MGP_LPJ_G0032828.1 mouse_genomes_project 7 124858730 124893959 - MGP_LPJ_P0085923 Pdilt protein_coding protein_coding MGP_LPJ_T0085782.1 MGP_LPJ_G0032803.1 mouse_genomes_project 7 119928840 119976869 + MGP_LPJ_P0085782 Insc protein_coding protein_coding MGP_LPJ_T0085783.1 MGP_LPJ_G0032803.1 mouse_genomes_project 7 119930886 119977147 + MGP_LPJ_P0085783 Insc protein_coding protein_coding MGP_LPJ_T0085784.1 MGP_LPJ_G0032803.1 mouse_genomes_project 7 119930912 120036945 + MGP_LPJ_P0085784 Insc protein_coding protein_coding MGP_LPJ_T0085785.1 MGP_LPJ_G0032803.1 mouse_genomes_project 7 119938865 119955444 + Insc protein_coding retained_intron MGP_LPJ_T0085786.1 MGP_LPJ_G0032803.1 mouse_genomes_project 7 119954834 120036948 + MGP_LPJ_P0085786 Insc protein_coding protein_coding MGP_LPJ_T0085787.1 MGP_LPJ_G0032803.1 mouse_genomes_project 7 119954872 119976906 + MGP_LPJ_P0085787 Insc protein_coding protein_coding MGP_LPJ_T0085788.1 MGP_LPJ_G0032803.1 mouse_genomes_project 7 119957417 119977042 + Insc protein_coding processed_transcript MGP_LPJ_T0085789.1 MGP_LPJ_G0032803.1 mouse_genomes_project 7 119977903 120036945 + Insc protein_coding retained_intron MGP_LPJ_T0085790.1 MGP_LPJ_G0032803.1 mouse_genomes_project 7 119979818 120015795 + MGP_LPJ_P0085790 Insc protein_coding protein_coding MGP_LPJ_T0009061.1 MGP_LPJ_G0007293.1 mouse_genomes_project 7 137248494 137252636 + 1700029B22Rik lincRNA lincRNA MGP_LPJ_T0009062.1 MGP_LPJ_G0007293.1 mouse_genomes_project 7 137248499 137252636 + 1700029B22Rik lincRNA lincRNA MGP_LPJ_T0009063.1 MGP_LPJ_G0007293.1 mouse_genomes_project 7 137248537 137252614 + 1700029B22Rik lincRNA lincRNA MGP_LPJ_T0084772.1 MGP_LPJ_G0032427.1 mouse_genomes_project 7 101094763 101315026 + MGP_LPJ_P0084772 Gab2 protein_coding protein_coding MGP_LPJ_T0084773.1 MGP_LPJ_G0032427.1 mouse_genomes_project 7 101094961 101311116 + MGP_LPJ_P0084773 Gab2 protein_coding protein_coding MGP_LPJ_T0086638.1 MGP_LPJ_G0032969.1 mouse_genomes_project 7 133615494 133620830 + MGP_LPJ_P0086638 Orai3 protein_coding protein_coding MGP_LPJ_T0086639.1 MGP_LPJ_G0032969.1 mouse_genomes_project 7 133615494 133620830 + MGP_LPJ_P0086639 Orai3 protein_coding protein_coding MGP_LPJ_T0086640.1 MGP_LPJ_G0032969.1 mouse_genomes_project 7 133615494 133620372 + MGP_LPJ_P0086640 Orai3 protein_coding protein_coding MGP_LPJ_T0005261.1 MGP_LPJ_G0004472.1 mouse_genomes_project 7 82901735 82904350 + antisense antisense MGP_LPJ_T0010865.1 MGP_LPJ_G0008983.1 mouse_genomes_project 7 23716583 23716647 - Mir7047 miRNA miRNA MGP_LPJ_T0005256.1 MGP_LPJ_G0004469.1 mouse_genomes_project 7 81646931 81649140 + Gm9885 antisense antisense MGP_LPJ_T0005257.1 MGP_LPJ_G0004469.1 mouse_genomes_project 7 81646931 81649136 + Gm9885 antisense antisense MGP_LPJ_T0008914.1 MGP_LPJ_G0007196.1 mouse_genomes_project 7 72849262 72850066 - Gm29327 lincRNA lincRNA MGP_LPJ_T0081643.1 MGP_LPJ_G0031642.1 mouse_genomes_project 7 16650704 16799063 - MGP_LPJ_P0081643 protein_coding protein_coding MGP_LPJ_T0085081.1 MGP_LPJ_G0032493.1 mouse_genomes_project 7 105722288 105816529 + MGP_LPJ_P0085081 protein_coding protein_coding MGP_LPJ_T0085082.1 MGP_LPJ_G0032493.1 mouse_genomes_project 7 105722288 105816529 + MGP_LPJ_P0085082 protein_coding protein_coding MGP_LPJ_T0085083.1 MGP_LPJ_G0032493.1 mouse_genomes_project 7 105722306 105816514 + MGP_LPJ_P0085083 protein_coding protein_coding MGP_LPJ_T0081291.1 MGP_LPJ_G0031505.1 mouse_genomes_project 7 3561364 3569021 + MGP_LPJ_P0081291 Zfp78 protein_coding protein_coding MGP_LPJ_T0081292.1 MGP_LPJ_G0031505.1 mouse_genomes_project 7 3561364 3569021 + MGP_LPJ_P0081292 Zfp78 protein_coding protein_coding MGP_LPJ_T0101399.1 MGP_LPJ_G0039581.1 mouse_genomes_project 7 27610555 27615719 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101400.1 MGP_LPJ_G0039581.1 mouse_genomes_project 7 27614946 27615501 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0008933.1 MGP_LPJ_G0007213.1 mouse_genomes_project 7 76408943 76416654 + Gm44734 lincRNA lincRNA MGP_LPJ_T0015865.1 MGP_LPJ_G0013956.1 mouse_genomes_project 7 132503948 132504177 + processed_pseudogene processed_pseudogene MGP_LPJ_T0086076.1 MGP_LPJ_G0032870.1 mouse_genomes_project 7 127674574 127685866 + MGP_LPJ_P0086076 Plk1 protein_coding protein_coding MGP_LPJ_T0086077.1 MGP_LPJ_G0032870.1 mouse_genomes_project 7 127674642 127679124 + MGP_LPJ_P0086077 Plk1 protein_coding nonsense_mediated_decay MGP_LPJ_T0086078.1 MGP_LPJ_G0032870.1 mouse_genomes_project 7 127674716 127676762 + MGP_LPJ_P0086078 Plk1 protein_coding protein_coding MGP_LPJ_T0081070.1 MGP_LPJ_G0031443.1 mouse_genomes_project 7 1152978 1158160 + MGP_LPJ_P0081070 Leng8 protein_coding protein_coding MGP_LPJ_T0081071.1 MGP_LPJ_G0031443.1 mouse_genomes_project 7 1152988 1155945 + MGP_LPJ_P0081071 Leng8 protein_coding protein_coding MGP_LPJ_T0081072.1 MGP_LPJ_G0031443.1 mouse_genomes_project 7 1152988 1164154 + MGP_LPJ_P0081072 Leng8 protein_coding protein_coding MGP_LPJ_T0081073.1 MGP_LPJ_G0031443.1 mouse_genomes_project 7 1152999 1156398 + MGP_LPJ_P0081073 Leng8 protein_coding protein_coding MGP_LPJ_T0081074.1 MGP_LPJ_G0031443.1 mouse_genomes_project 7 1153005 1164149 + MGP_LPJ_P0081074 Leng8 protein_coding protein_coding MGP_LPJ_T0081075.1 MGP_LPJ_G0031443.1 mouse_genomes_project 7 1153010 1158085 + MGP_LPJ_P0081075 Leng8 protein_coding protein_coding MGP_LPJ_T0081076.1 MGP_LPJ_G0031443.1 mouse_genomes_project 7 1153023 1164150 + Leng8 protein_coding retained_intron MGP_LPJ_T0081077.1 MGP_LPJ_G0031443.1 mouse_genomes_project 7 1153507 1157039 + MGP_LPJ_P0081077 Leng8 protein_coding protein_coding MGP_LPJ_T0081078.1 MGP_LPJ_G0031443.1 mouse_genomes_project 7 1158135 1158906 + Leng8 protein_coding retained_intron MGP_LPJ_T0081079.1 MGP_LPJ_G0031443.1 mouse_genomes_project 7 1160696 1161619 + Leng8 protein_coding retained_intron MGP_LPJ_T0102309.1 MGP_LPJ_G0040346.1 mouse_genomes_project 7 9653130 9654081 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0100982.1 MGP_LPJ_G0039245.1 mouse_genomes_project 7 103782841 103782972 - Gm25409 snoRNA snoRNA MGP_LPJ_T0015785.1 MGP_LPJ_G0013876.1 mouse_genomes_project 7 76484259 76486899 - processed_pseudogene processed_pseudogene MGP_LPJ_T0083164.1 MGP_LPJ_G0032016.1 mouse_genomes_project 7 42351812 42395432 - MGP_LPJ_P0083164 Vmn2r59 protein_coding protein_coding MGP_LPJ_T0005305.1 MGP_LPJ_G0004501.1 mouse_genomes_project 7 126324422 126327029 - antisense antisense MGP_LPJ_T0081331.1 MGP_LPJ_G0031532.1 mouse_genomes_project 7 8017898 8065282 + MGP_LPJ_P0081331 Nlrp4b protein_coding protein_coding MGP_LPJ_T0081332.1 MGP_LPJ_G0031532.1 mouse_genomes_project 7 8017926 8065292 + MGP_LPJ_P0081332 Nlrp4b protein_coding protein_coding MGP_LPJ_T0081333.1 MGP_LPJ_G0031532.1 mouse_genomes_project 7 8050097 8062259 + MGP_LPJ_P0081333 Nlrp4b protein_coding protein_coding MGP_LPJ_T0084505.1 MGP_LPJ_G0032332.1 mouse_genomes_project 7 84489570 84621698 + MGP_LPJ_P0084505 Pde8a protein_coding protein_coding MGP_LPJ_T0084506.1 MGP_LPJ_G0032332.1 mouse_genomes_project 7 84582962 84602433 + Pde8a protein_coding processed_transcript MGP_LPJ_T0084507.1 MGP_LPJ_G0032332.1 mouse_genomes_project 7 84593941 84606575 + Pde8a protein_coding processed_transcript MGP_LPJ_T0084643.1 MGP_LPJ_G0032386.1 mouse_genomes_project 7 89984231 89985224 + MGP_LPJ_P0084643 Olfr299 protein_coding protein_coding MGP_LPJ_T0085881.1 MGP_LPJ_G0032818.1 mouse_genomes_project 7 123908273 123998531 + MGP_LPJ_P0085881 Tmc5 protein_coding protein_coding MGP_LPJ_T0085882.1 MGP_LPJ_G0032818.1 mouse_genomes_project 7 123908273 123998532 + MGP_LPJ_P0085882 Tmc5 protein_coding protein_coding MGP_LPJ_T0085883.1 MGP_LPJ_G0032818.1 mouse_genomes_project 7 123913256 123998532 + MGP_LPJ_P0085883 Tmc5 protein_coding protein_coding MGP_LPJ_T0085884.1 MGP_LPJ_G0032818.1 mouse_genomes_project 7 123940669 123998106 + MGP_LPJ_P0085884 Tmc5 protein_coding unknown_likely_coding MGP_LPJ_T0085885.1 MGP_LPJ_G0032818.1 mouse_genomes_project 7 123952180 123998532 + MGP_LPJ_P0085885 Tmc5 protein_coding protein_coding MGP_LPJ_T0018373.1 MGP_LPJ_G0015612.1 mouse_genomes_project 7 134309911 134311955 - Gm15503 processed_transcript retained_intron MGP_LPJ_T0018374.1 MGP_LPJ_G0015612.1 mouse_genomes_project 7 134311381 134313309 - Gm15503 processed_transcript sense_intronic MGP_LPJ_T0084500.1 MGP_LPJ_G0032330.1 mouse_genomes_project 7 84323028 84373360 + MGP_LPJ_P0084500 protein_coding protein_coding MGP_LPJ_T0084501.1 MGP_LPJ_G0032330.1 mouse_genomes_project 7 84362535 84363398 + protein_coding retained_intron MGP_LPJ_T0010929.1 MGP_LPJ_G0009047.1 mouse_genomes_project 7 100287531 100287630 + Mir6394 miRNA miRNA MGP_LPJ_T0008915.1 MGP_LPJ_G0007197.1 mouse_genomes_project 7 72981096 73000930 - Gm28258 lincRNA lincRNA MGP_LPJ_T0082265.1 MGP_LPJ_G0031815.1 mouse_genomes_project 7 26463661 26467314 + MGP_LPJ_P0082265 Sertad3 protein_coding protein_coding MGP_LPJ_T0008900.1 MGP_LPJ_G0007188.1 mouse_genomes_project 7 68008531 68042456 + BC046251 lincRNA lincRNA MGP_LPJ_T0010957.1 MGP_LPJ_G0009075.1 mouse_genomes_project 7 149347030 149347114 - Mir675 miRNA miRNA MGP_LPJ_T0100963.1 MGP_LPJ_G0039226.1 mouse_genomes_project 7 61287587 61287675 - Gm22496 snoRNA snoRNA MGP_LPJ_T0084642.1 MGP_LPJ_G0032385.1 mouse_genomes_project 7 89929463 89939850 + MGP_LPJ_P0084642 Olfr301 protein_coding protein_coding MGP_LPJ_T0084686.1 MGP_LPJ_G0032406.1 mouse_genomes_project 7 93273246 93451672 + protein_coding retained_intron MGP_LPJ_T0084687.1 MGP_LPJ_G0032406.1 mouse_genomes_project 7 93273269 93489449 + MGP_LPJ_P0084687 protein_coding unknown_likely_coding MGP_LPJ_T0084688.1 MGP_LPJ_G0032406.1 mouse_genomes_project 7 93273388 93284036 + protein_coding processed_transcript MGP_LPJ_T0084689.1 MGP_LPJ_G0032406.1 mouse_genomes_project 7 93273740 93486533 + protein_coding retained_intron MGP_LPJ_T0084690.1 MGP_LPJ_G0032406.1 mouse_genomes_project 7 93377804 93461806 + protein_coding processed_transcript MGP_LPJ_T0084691.1 MGP_LPJ_G0032406.1 mouse_genomes_project 7 93465378 93489514 + MGP_LPJ_P0084691 protein_coding protein_coding MGP_LPJ_T0081640.1 MGP_LPJ_G0031640.1 mouse_genomes_project 7 16427440 16651103 - MGP_LPJ_P0081640 Psg18 protein_coding protein_coding MGP_LPJ_T0081641.1 MGP_LPJ_G0031640.1 mouse_genomes_project 7 16427826 16439104 - MGP_LPJ_P0081641 Psg18 protein_coding protein_coding MGP_LPJ_T0085958.1 MGP_LPJ_G0032837.1 mouse_genomes_project 7 125240806 125284674 - MGP_LPJ_P0085958 Dcun1d3 protein_coding protein_coding MGP_LPJ_T0085959.1 MGP_LPJ_G0032837.1 mouse_genomes_project 7 125243456 125284472 - MGP_LPJ_P0085959 Dcun1d3 protein_coding protein_coding MGP_LPJ_T0085960.1 MGP_LPJ_G0032837.1 mouse_genomes_project 7 125244968 125285220 - MGP_LPJ_P0085960 Dcun1d3 protein_coding protein_coding MGP_LPJ_T0085961.1 MGP_LPJ_G0032837.1 mouse_genomes_project 7 125245636 125249481 - MGP_LPJ_P0085961 Dcun1d3 protein_coding protein_coding MGP_LPJ_T0085962.1 MGP_LPJ_G0032837.1 mouse_genomes_project 7 125247269 125249453 - MGP_LPJ_P0085962 Dcun1d3 protein_coding protein_coding MGP_LPJ_T0018382.1 MGP_LPJ_G0015617.1 mouse_genomes_project 7 148040836 148046762 - B230206H07Rik processed_transcript processed_transcript MGP_LPJ_T0018383.1 MGP_LPJ_G0015617.1 mouse_genomes_project 7 148040873 148046790 - B230206H07Rik processed_transcript processed_transcript MGP_LPJ_T0084179.1 MGP_LPJ_G0032277.1 mouse_genomes_project 7 76756593 76832491 - MGP_LPJ_P0084179 St8sia2 protein_coding protein_coding MGP_LPJ_T0084180.1 MGP_LPJ_G0032277.1 mouse_genomes_project 7 76778304 76832507 - MGP_LPJ_P0084180 St8sia2 protein_coding protein_coding MGP_LPJ_T0102437.1 MGP_LPJ_G0040473.1 mouse_genomes_project 7 90450209 90451085 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0082373.1 MGP_LPJ_G0031847.1 mouse_genomes_project 7 27493481 27500093 - MGP_LPJ_P0082373 Med29 protein_coding protein_coding MGP_LPJ_T0010843.1 MGP_LPJ_G0008961.1 mouse_genomes_project 7 98845 98903 - Mir290b miRNA miRNA MGP_LPJ_T0081587.1 MGP_LPJ_G0031620.1 mouse_genomes_project 7 14834414 14868017 + MGP_LPJ_P0081587 Prkd2 protein_coding protein_coding MGP_LPJ_T0081588.1 MGP_LPJ_G0031620.1 mouse_genomes_project 7 14834577 14868112 + MGP_LPJ_P0081588 Prkd2 protein_coding protein_coding MGP_LPJ_T0081589.1 MGP_LPJ_G0031620.1 mouse_genomes_project 7 14835673 14842822 + Prkd2 protein_coding processed_transcript MGP_LPJ_T0081590.1 MGP_LPJ_G0031620.1 mouse_genomes_project 7 14836747 14839119 + Prkd2 protein_coding processed_transcript MGP_LPJ_T0081591.1 MGP_LPJ_G0031620.1 mouse_genomes_project 7 14837313 14844559 + Prkd2 protein_coding retained_intron MGP_LPJ_T0081592.1 MGP_LPJ_G0031620.1 mouse_genomes_project 7 14842765 14847785 + Prkd2 protein_coding retained_intron MGP_LPJ_T0081593.1 MGP_LPJ_G0031620.1 mouse_genomes_project 7 14859729 14867535 + Prkd2 protein_coding retained_intron MGP_LPJ_T0081594.1 MGP_LPJ_G0031620.1 mouse_genomes_project 7 14866894 14867781 + Prkd2 protein_coding retained_intron MGP_LPJ_T0083778.1 MGP_LPJ_G0032183.1 mouse_genomes_project 7 48008671 48041066 - MGP_LPJ_P0083778 protein_coding protein_coding MGP_LPJ_T0083779.1 MGP_LPJ_G0032183.1 mouse_genomes_project 7 48008749 48012167 - protein_coding processed_transcript MGP_LPJ_T0083780.1 MGP_LPJ_G0032183.1 mouse_genomes_project 7 48022122 48035496 - MGP_LPJ_P0083780 protein_coding protein_coding MGP_LPJ_T0083781.1 MGP_LPJ_G0032183.1 mouse_genomes_project 7 48027686 48030143 - protein_coding retained_intron MGP_LPJ_T0083782.1 MGP_LPJ_G0032183.1 mouse_genomes_project 7 48028148 48041034 - MGP_LPJ_P0083782 protein_coding protein_coding MGP_LPJ_T0002338.1 MGP_LPJ_G0002246.1 mouse_genomes_project 7 133658696 133660032 - TEC TEC MGP_LPJ_T0087627.1 MGP_LPJ_G0033196.1 mouse_genomes_project 7 150555469 150561269 - Osbpl5 protein_coding retained_intron MGP_LPJ_T0087628.1 MGP_LPJ_G0033196.1 mouse_genomes_project 7 150555469 150606804 - MGP_LPJ_P0087628 Osbpl5 protein_coding protein_coding MGP_LPJ_T0087629.1 MGP_LPJ_G0033196.1 mouse_genomes_project 7 150555469 150608426 - MGP_LPJ_P0087629 Osbpl5 protein_coding protein_coding MGP_LPJ_T0087630.1 MGP_LPJ_G0033196.1 mouse_genomes_project 7 150560971 150561795 - Osbpl5 protein_coding retained_intron MGP_LPJ_T0087631.1 MGP_LPJ_G0033196.1 mouse_genomes_project 7 150569528 150571592 - Osbpl5 protein_coding retained_intron MGP_LPJ_T0087632.1 MGP_LPJ_G0033196.1 mouse_genomes_project 7 150575523 150625286 - MGP_LPJ_P0087632 Osbpl5 protein_coding protein_coding MGP_LPJ_T0087633.1 MGP_LPJ_G0033196.1 mouse_genomes_project 7 150579968 150606762 - Osbpl5 protein_coding processed_transcript MGP_LPJ_T0085553.1 MGP_LPJ_G0032730.1 mouse_genomes_project 7 113175724 113191161 - MGP_LPJ_P0085553 Olfr488 protein_coding protein_coding MGP_LPJ_T0081306.1 MGP_LPJ_G0031517.1 mouse_genomes_project 7 3900648 3926885 - MGP_LPJ_P0081306 Zim1 protein_coding protein_coding MGP_LPJ_T0081307.1 MGP_LPJ_G0031517.1 mouse_genomes_project 7 3906500 3926864 - MGP_LPJ_P0081307 Zim1 protein_coding protein_coding MGP_LPJ_T0081308.1 MGP_LPJ_G0031517.1 mouse_genomes_project 7 3907416 3919166 - MGP_LPJ_P0081308 Zim1 protein_coding protein_coding MGP_LPJ_T0083108.1 MGP_LPJ_G0032000.1 mouse_genomes_project 7 37847101 37906363 - MGP_LPJ_P0083108 Uri1 protein_coding protein_coding MGP_LPJ_T0083109.1 MGP_LPJ_G0032000.1 mouse_genomes_project 7 37847102 37857338 - Uri1 protein_coding processed_transcript MGP_LPJ_T0083110.1 MGP_LPJ_G0032000.1 mouse_genomes_project 7 37847751 37906387 - MGP_LPJ_P0083110 Uri1 protein_coding protein_coding MGP_LPJ_T0083111.1 MGP_LPJ_G0032000.1 mouse_genomes_project 7 37848410 37849638 - MGP_LPJ_P0083111 Uri1 protein_coding protein_coding MGP_LPJ_T0083112.1 MGP_LPJ_G0032000.1 mouse_genomes_project 7 37848473 37910390 - MGP_LPJ_P0083112 Uri1 protein_coding protein_coding MGP_LPJ_T0083113.1 MGP_LPJ_G0032000.1 mouse_genomes_project 7 37852550 37853080 - Uri1 protein_coding processed_transcript MGP_LPJ_T0083114.1 MGP_LPJ_G0032000.1 mouse_genomes_project 7 37857314 37906343 - MGP_LPJ_P0083114 Uri1 protein_coding nonsense_mediated_decay MGP_LPJ_T0100976.1 MGP_LPJ_G0039239.1 mouse_genomes_project 7 91970610 91970743 + Gm25345 snoRNA snoRNA MGP_LPJ_T0010905.1 MGP_LPJ_G0009023.1 mouse_genomes_project 7 63980346 63980444 - Gm23917 miRNA miRNA MGP_LPJ_T0098311.1 MGP_LPJ_G0036592.1 mouse_genomes_project 7 138220447 138220567 + n-R5s159 rRNA rRNA MGP_LPJ_T0015687.1 MGP_LPJ_G0013778.1 mouse_genomes_project 7 22980716 22981115 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002234.1 MGP_LPJ_G0002143.1 mouse_genomes_project 7 36510627 36511549 + TEC TEC MGP_LPJ_T0082975.1 MGP_LPJ_G0031977.1 mouse_genomes_project 7 33886225 33886681 + MGP_LPJ_P0082975 Gm6096 protein_coding protein_coding MGP_LPJ_T0100973.1 MGP_LPJ_G0039236.1 mouse_genomes_project 7 72537579 72537708 - Gm24120 snoRNA snoRNA MGP_LPJ_T0087167.1 MGP_LPJ_G0033087.1 mouse_genomes_project 7 146850893 146863550 + MGP_LPJ_P0087167 Cd163l1 protein_coding protein_coding MGP_LPJ_T0085569.1 MGP_LPJ_G0032746.1 mouse_genomes_project 7 113683020 113684076 + MGP_LPJ_P0085569 Olfr512 protein_coding protein_coding MGP_LPJ_T0085551.1 MGP_LPJ_G0032728.1 mouse_genomes_project 7 113053832 113054930 - MGP_LPJ_P0085551 protein_coding protein_coding MGP_LPJ_T0085641.1 MGP_LPJ_G0032772.1 mouse_genomes_project 7 115122095 115145489 + MGP_LPJ_P0085641 Wee1 protein_coding protein_coding MGP_LPJ_T0083795.1 MGP_LPJ_G0032191.1 mouse_genomes_project 7 48581962 48611311 - MGP_LPJ_P0083795 protein_coding protein_coding MGP_LPJ_T0102464.1 MGP_LPJ_G0040500.1 mouse_genomes_project 7 110505043 110506309 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0083268.1 MGP_LPJ_G0032055.1 mouse_genomes_project 7 44800353 44804344 + MGP_LPJ_P0083268 Klk1b11 protein_coding protein_coding MGP_LPJ_T0083351.1 MGP_LPJ_G0032073.1 mouse_genomes_project 7 45358049 45385708 - MGP_LPJ_P0083351 Mybpc2 protein_coding protein_coding MGP_LPJ_T0083352.1 MGP_LPJ_G0032073.1 mouse_genomes_project 7 45358182 45391004 - MGP_LPJ_P0083352 Mybpc2 protein_coding unknown_likely_coding MGP_LPJ_T0009020.1 MGP_LPJ_G0007265.1 mouse_genomes_project 7 126726505 126768117 + Gm45079 lincRNA lincRNA MGP_LPJ_T0084641.1 MGP_LPJ_G0032384.1 mouse_genomes_project 7 89920148 89921188 - MGP_LPJ_P0084641 Olfr303 protein_coding protein_coding MGP_LPJ_T0087635.1 MGP_LPJ_G0033198.1 mouse_genomes_project 7 150646705 150652825 - MGP_LPJ_P0087635 Mrgpre protein_coding protein_coding MGP_LPJ_T0087185.1 MGP_LPJ_G0033103.1 mouse_genomes_project 7 147320398 147321330 + MGP_LPJ_P0087185 Olfr45 protein_coding protein_coding MGP_LPJ_T0085570.1 MGP_LPJ_G0032747.1 mouse_genomes_project 7 113723009 113723939 + MGP_LPJ_P0085570 Olfr513 protein_coding protein_coding MGP_LPJ_T0015853.1 MGP_LPJ_G0013944.1 mouse_genomes_project 7 126690634 126691376 - processed_pseudogene processed_pseudogene MGP_LPJ_T0085244.1 MGP_LPJ_G0032550.1 mouse_genomes_project 7 107463435 107464395 + MGP_LPJ_P0085244 Olfr583 protein_coding protein_coding MGP_LPJ_T0010849.1 MGP_LPJ_G0008967.1 mouse_genomes_project 7 100754 100836 + Mir294 miRNA miRNA MGP_LPJ_T0098307.1 MGP_LPJ_G0036588.1 mouse_genomes_project 7 100869999 100870092 - Gm25712 rRNA rRNA MGP_LPJ_T0102368.1 MGP_LPJ_G0040404.1 mouse_genomes_project 7 42690519 42690761 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0084353.1 MGP_LPJ_G0032310.1 mouse_genomes_project 7 83428063 83433459 - MGP_LPJ_P0084353 Cib1 protein_coding protein_coding MGP_LPJ_T0084354.1 MGP_LPJ_G0032310.1 mouse_genomes_project 7 83428071 83433523 - MGP_LPJ_P0084354 Cib1 protein_coding protein_coding MGP_LPJ_T0084355.1 MGP_LPJ_G0032310.1 mouse_genomes_project 7 83428071 83433464 - MGP_LPJ_P0084355 Cib1 protein_coding protein_coding MGP_LPJ_T0084356.1 MGP_LPJ_G0032310.1 mouse_genomes_project 7 83428744 83431253 - Cib1 protein_coding retained_intron MGP_LPJ_T0084357.1 MGP_LPJ_G0032310.1 mouse_genomes_project 7 83429065 83433496 - Cib1 protein_coding retained_intron MGP_LPJ_T0084358.1 MGP_LPJ_G0032310.1 mouse_genomes_project 7 83429305 83433704 - MGP_LPJ_P0084358 Cib1 protein_coding nonsense_mediated_decay MGP_LPJ_T0084359.1 MGP_LPJ_G0032310.1 mouse_genomes_project 7 83432344 83433630 - Cib1 protein_coding retained_intron MGP_LPJ_T0084360.1 MGP_LPJ_G0032310.1 mouse_genomes_project 7 83432464 83433480 - Cib1 protein_coding retained_intron MGP_LPJ_T0015771.1 MGP_LPJ_G0013862.1 mouse_genomes_project 7 64755652 64755924 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011718.1 MGP_LPJ_G0009836.1 mouse_genomes_project 7 150114897 150115121 + Gm27539 misc_RNA misc_RNA MGP_LPJ_T0015650.1 MGP_LPJ_G0013741.1 mouse_genomes_project 7 3036145 3036277 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009051.1 MGP_LPJ_G0007284.1 mouse_genomes_project 7 134396141 134407619 - Gm45018 lincRNA lincRNA MGP_LPJ_T0085660.1 MGP_LPJ_G0032776.1 mouse_genomes_project 7 115792894 115836570 + MGP_LPJ_P0085660 Ampd3 protein_coding protein_coding MGP_LPJ_T0085661.1 MGP_LPJ_G0032776.1 mouse_genomes_project 7 115793021 115816193 + Ampd3 protein_coding processed_transcript MGP_LPJ_T0085662.1 MGP_LPJ_G0032776.1 mouse_genomes_project 7 115797281 115837056 + MGP_LPJ_P0085662 Ampd3 protein_coding protein_coding MGP_LPJ_T0085663.1 MGP_LPJ_G0032776.1 mouse_genomes_project 7 115797465 115819632 + Ampd3 protein_coding retained_intron MGP_LPJ_T0085664.1 MGP_LPJ_G0032776.1 mouse_genomes_project 7 115798349 115813723 + MGP_LPJ_P0085664 Ampd3 protein_coding protein_coding MGP_LPJ_T0085665.1 MGP_LPJ_G0032776.1 mouse_genomes_project 7 115798921 115813645 + MGP_LPJ_P0085665 Ampd3 protein_coding protein_coding MGP_LPJ_T0085666.1 MGP_LPJ_G0032776.1 mouse_genomes_project 7 115802542 115816238 + MGP_LPJ_P0085666 Ampd3 protein_coding protein_coding MGP_LPJ_T0015860.1 MGP_LPJ_G0013951.1 mouse_genomes_project 7 130890564 130891002 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005179.1 MGP_LPJ_G0004412.1 mouse_genomes_project 7 17272284 17273050 - Gm45058 antisense antisense MGP_LPJ_T0100998.1 MGP_LPJ_G0039261.1 mouse_genomes_project 7 129763523 129763652 + Gm25759 snoRNA snoRNA MGP_LPJ_T0010860.1 MGP_LPJ_G0008978.1 mouse_genomes_project 7 17485599 17485697 + Mir330 miRNA miRNA MGP_LPJ_T0081226.1 MGP_LPJ_G0031478.1 mouse_genomes_project 7 2042622 2055162 - Zfp579 protein_coding processed_transcript MGP_LPJ_T0081227.1 MGP_LPJ_G0031478.1 mouse_genomes_project 7 2051958 2055265 - Zfp579 protein_coding processed_transcript MGP_LPJ_T0081228.1 MGP_LPJ_G0031478.1 mouse_genomes_project 7 2051958 2054447 - MGP_LPJ_P0081228 Zfp579 protein_coding protein_coding MGP_LPJ_T0081229.1 MGP_LPJ_G0031478.1 mouse_genomes_project 7 2051960 2055208 - MGP_LPJ_P0081229 Zfp579 protein_coding protein_coding MGP_LPJ_T0081230.1 MGP_LPJ_G0031478.1 mouse_genomes_project 7 2053307 2055192 - MGP_LPJ_P0081230 Zfp579 protein_coding protein_coding MGP_LPJ_T0081231.1 MGP_LPJ_G0031478.1 mouse_genomes_project 7 2054117 2055136 - Zfp579 protein_coding processed_transcript MGP_LPJ_T0087179.1 MGP_LPJ_G0033097.1 mouse_genomes_project 7 147127393 147133529 - MGP_LPJ_P0087179 Olfr536 protein_coding protein_coding MGP_LPJ_T0082751.1 MGP_LPJ_G0031932.1 mouse_genomes_project 7 29880403 29882935 + MGP_LPJ_P0082751 Igflr1 protein_coding protein_coding MGP_LPJ_T0082752.1 MGP_LPJ_G0031932.1 mouse_genomes_project 7 29881052 29882932 + MGP_LPJ_P0082752 Igflr1 protein_coding protein_coding MGP_LPJ_T0081709.1 MGP_LPJ_G0031663.1 mouse_genomes_project 7 17419021 17441631 + MGP_LPJ_P0081709 Fbxo46 protein_coding protein_coding MGP_LPJ_T0081710.1 MGP_LPJ_G0031663.1 mouse_genomes_project 7 17430798 17439253 + MGP_LPJ_P0081710 Fbxo46 protein_coding protein_coding MGP_LPJ_T0085555.1 MGP_LPJ_G0032732.1 mouse_genomes_project 7 113255108 113256041 + MGP_LPJ_P0085555 Olfr491 protein_coding protein_coding MGP_LPJ_T0099730.1 MGP_LPJ_G0037993.1 mouse_genomes_project 7 114979866 114979920 + Gm24842 snRNA snRNA MGP_LPJ_T0100953.1 MGP_LPJ_G0039216.1 mouse_genomes_project 7 46042877 46042967 - Snord35a snoRNA snoRNA MGP_LPJ_T0010899.1 MGP_LPJ_G0009017.1 mouse_genomes_project 7 63928056 63928136 - Gm23962 miRNA miRNA MGP_LPJ_T0100966.1 MGP_LPJ_G0039229.1 mouse_genomes_project 7 61559267 61559346 - snoRNA snoRNA MGP_LPJ_T0085252.1 MGP_LPJ_G0032557.1 mouse_genomes_project 7 107630159 107631143 + MGP_LPJ_P0085252 Olfr593 protein_coding protein_coding MGP_LPJ_T0083868.1 MGP_LPJ_G0032216.1 mouse_genomes_project 7 53731683 53735729 - MGP_LPJ_P0083868 1700015G11Rik protein_coding protein_coding MGP_LPJ_T0083869.1 MGP_LPJ_G0032216.1 mouse_genomes_project 7 53731685 53735704 - MGP_LPJ_P0083869 1700015G11Rik protein_coding protein_coding MGP_LPJ_T0083870.1 MGP_LPJ_G0032216.1 mouse_genomes_project 7 53731687 53735696 - MGP_LPJ_P0083870 1700015G11Rik protein_coding protein_coding MGP_LPJ_T0083871.1 MGP_LPJ_G0032216.1 mouse_genomes_project 7 53731690 53735683 - MGP_LPJ_P0083871 1700015G11Rik protein_coding protein_coding MGP_LPJ_T0099723.1 MGP_LPJ_G0037986.1 mouse_genomes_project 7 99388427 99388534 - Gm25684 snRNA snRNA MGP_LPJ_T0008847.1 MGP_LPJ_G0007148.1 mouse_genomes_project 7 34318927 34330287 - Gm12756 lincRNA lincRNA MGP_LPJ_T0083791.1 MGP_LPJ_G0032189.1 mouse_genomes_project 7 48302117 48321213 - MGP_LPJ_P0083791 Mrgpra6 protein_coding protein_coding MGP_LPJ_T0083792.1 MGP_LPJ_G0032189.1 mouse_genomes_project 7 48302127 48304649 - MGP_LPJ_P0083792 Mrgpra6 protein_coding protein_coding MGP_LPJ_T0099741.1 MGP_LPJ_G0038004.1 mouse_genomes_project 7 132314038 132314144 - Gm25579 snRNA snRNA MGP_LPJ_T0100989.1 MGP_LPJ_G0039252.1 mouse_genomes_project 7 115039407 115039591 + Snora23 snoRNA snoRNA MGP_LPJ_T0084625.1 MGP_LPJ_G0032369.1 mouse_genomes_project 7 88444708 88610678 - MGP_LPJ_P0084625 protein_coding protein_coding MGP_LPJ_T0015808.1 MGP_LPJ_G0013899.1 mouse_genomes_project 7 92208322 92209302 - processed_pseudogene processed_pseudogene MGP_LPJ_T0081621.1 MGP_LPJ_G0031629.1 mouse_genomes_project 7 15053521 15097556 - MGP_LPJ_P0081621 protein_coding protein_coding MGP_LPJ_T0081622.1 MGP_LPJ_G0031629.1 mouse_genomes_project 7 15057742 15089300 - MGP_LPJ_P0081622 protein_coding protein_coding MGP_LPJ_T0081623.1 MGP_LPJ_G0031629.1 mouse_genomes_project 7 15074088 15075992 - MGP_LPJ_P0081623 protein_coding protein_coding MGP_LPJ_T0081624.1 MGP_LPJ_G0031629.1 mouse_genomes_project 7 15078727 15097513 - MGP_LPJ_P0081624 protein_coding protein_coding MGP_LPJ_T0085638.1 MGP_LPJ_G0032770.1 mouse_genomes_project 7 115051904 115055243 - MGP_LPJ_P0085638 protein_coding protein_coding MGP_LPJ_T0084472.1 MGP_LPJ_G0032326.1 mouse_genomes_project 7 84141354 84151923 - MGP_LPJ_P0084472 Wdr73 protein_coding protein_coding MGP_LPJ_T0084473.1 MGP_LPJ_G0032326.1 mouse_genomes_project 7 84141355 84151886 - Wdr73 protein_coding retained_intron MGP_LPJ_T0084474.1 MGP_LPJ_G0032326.1 mouse_genomes_project 7 84141355 84151886 - Wdr73 protein_coding retained_intron MGP_LPJ_T0084475.1 MGP_LPJ_G0032326.1 mouse_genomes_project 7 84141890 84151888 - Wdr73 protein_coding retained_intron MGP_LPJ_T0084476.1 MGP_LPJ_G0032326.1 mouse_genomes_project 7 84143625 84151873 - Wdr73 protein_coding processed_transcript MGP_LPJ_T0084477.1 MGP_LPJ_G0032326.1 mouse_genomes_project 7 84143689 84151874 - MGP_LPJ_P0084477 Wdr73 protein_coding protein_coding MGP_LPJ_T0084478.1 MGP_LPJ_G0032326.1 mouse_genomes_project 7 84143690 84151373 - Wdr73 protein_coding processed_transcript MGP_LPJ_T0084479.1 MGP_LPJ_G0032326.1 mouse_genomes_project 7 84144329 84151158 - Wdr73 protein_coding processed_transcript MGP_LPJ_T0084480.1 MGP_LPJ_G0032326.1 mouse_genomes_project 7 84148565 84151898 - Wdr73 protein_coding processed_transcript MGP_LPJ_T0084481.1 MGP_LPJ_G0032326.1 mouse_genomes_project 7 84151326 84151886 - Wdr73 protein_coding processed_transcript MGP_LPJ_T0082038.1 MGP_LPJ_G0031758.1 mouse_genomes_project 7 23951323 23971247 - MGP_LPJ_P0082038 Dedd2 protein_coding unknown_likely_coding MGP_LPJ_T0082039.1 MGP_LPJ_G0031758.1 mouse_genomes_project 7 23951333 23971213 - Dedd2 protein_coding processed_transcript MGP_LPJ_T0082040.1 MGP_LPJ_G0031758.1 mouse_genomes_project 7 23968474 23971225 - Dedd2 protein_coding retained_intron MGP_LPJ_T0082770.1 MGP_LPJ_G0031939.1 mouse_genomes_project 7 29971501 29985969 - MGP_LPJ_P0082770 Haus5 protein_coding nonsense_mediated_decay MGP_LPJ_T0082771.1 MGP_LPJ_G0031939.1 mouse_genomes_project 7 29971506 29986030 - MGP_LPJ_P0082771 Haus5 protein_coding protein_coding MGP_LPJ_T0082772.1 MGP_LPJ_G0031939.1 mouse_genomes_project 7 29972574 29977009 - Haus5 protein_coding retained_intron MGP_LPJ_T0082773.1 MGP_LPJ_G0031939.1 mouse_genomes_project 7 29977560 29978965 - Haus5 protein_coding retained_intron MGP_LPJ_T0082774.1 MGP_LPJ_G0031939.1 mouse_genomes_project 7 29978088 29985996 - Haus5 protein_coding retained_intron MGP_LPJ_T0082775.1 MGP_LPJ_G0031939.1 mouse_genomes_project 7 29978849 29980866 - Haus5 protein_coding retained_intron MGP_LPJ_T0084839.1 MGP_LPJ_G0032441.1 mouse_genomes_project 7 102093330 102163305 - MGP_LPJ_P0084839 Myo7a protein_coding protein_coding MGP_LPJ_T0084840.1 MGP_LPJ_G0032441.1 mouse_genomes_project 7 102093333 102111569 - MGP_LPJ_P0084840 Myo7a protein_coding nonsense_mediated_decay MGP_LPJ_T0084841.1 MGP_LPJ_G0032441.1 mouse_genomes_project 7 102093671 102152776 - MGP_LPJ_P0084841 Myo7a protein_coding protein_coding MGP_LPJ_T0084842.1 MGP_LPJ_G0032441.1 mouse_genomes_project 7 102093671 102152776 - MGP_LPJ_P0084842 Myo7a protein_coding protein_coding MGP_LPJ_T0084843.1 MGP_LPJ_G0032441.1 mouse_genomes_project 7 102093760 102150684 - MGP_LPJ_P0084843 Myo7a protein_coding protein_coding MGP_LPJ_T0084844.1 MGP_LPJ_G0032441.1 mouse_genomes_project 7 102093895 102163284 - MGP_LPJ_P0084844 Myo7a protein_coding protein_coding MGP_LPJ_T0084845.1 MGP_LPJ_G0032441.1 mouse_genomes_project 7 102104857 102107413 - Myo7a protein_coding retained_intron MGP_LPJ_T0084846.1 MGP_LPJ_G0032441.1 mouse_genomes_project 7 102123337 102128269 - Myo7a protein_coding processed_transcript MGP_LPJ_T0084847.1 MGP_LPJ_G0032441.1 mouse_genomes_project 7 102141184 102156155 - Myo7a protein_coding processed_transcript MGP_LPJ_T0084848.1 MGP_LPJ_G0032441.1 mouse_genomes_project 7 102141759 102146915 - Myo7a protein_coding processed_transcript MGP_LPJ_T0084849.1 MGP_LPJ_G0032441.1 mouse_genomes_project 7 102141799 102146914 - Myo7a protein_coding processed_transcript MGP_LPJ_T0084850.1 MGP_LPJ_G0032441.1 mouse_genomes_project 7 102141808 102163274 - MGP_LPJ_P0084850 Myo7a protein_coding protein_coding MGP_LPJ_T0084851.1 MGP_LPJ_G0032441.1 mouse_genomes_project 7 102152260 102163273 - Myo7a protein_coding processed_transcript MGP_LPJ_T0084257.1 MGP_LPJ_G0032291.1 mouse_genomes_project 7 82239821 82249798 - Mfge8 protein_coding retained_intron MGP_LPJ_T0084258.1 MGP_LPJ_G0032291.1 mouse_genomes_project 7 82239821 82256196 - MGP_LPJ_P0084258 Mfge8 protein_coding protein_coding MGP_LPJ_T0084259.1 MGP_LPJ_G0032291.1 mouse_genomes_project 7 82239822 82256203 - MGP_LPJ_P0084259 Mfge8 protein_coding protein_coding MGP_LPJ_T0084260.1 MGP_LPJ_G0032291.1 mouse_genomes_project 7 82240169 82256174 - MGP_LPJ_P0084260 Mfge8 protein_coding nonsense_mediated_decay MGP_LPJ_T0084261.1 MGP_LPJ_G0032291.1 mouse_genomes_project 7 82240192 82243043 - Mfge8 protein_coding retained_intron MGP_LPJ_T0084262.1 MGP_LPJ_G0032291.1 mouse_genomes_project 7 82242550 82248819 - Mfge8 protein_coding retained_intron MGP_LPJ_T0084263.1 MGP_LPJ_G0032291.1 mouse_genomes_project 7 82247889 82249062 - Mfge8 protein_coding retained_intron MGP_LPJ_T0084264.1 MGP_LPJ_G0032291.1 mouse_genomes_project 7 82248880 82253576 - Mfge8 protein_coding processed_transcript MGP_LPJ_T0084265.1 MGP_LPJ_G0032291.1 mouse_genomes_project 7 82250932 82256132 - Mfge8 protein_coding retained_intron MGP_LPJ_T0084266.1 MGP_LPJ_G0032291.1 mouse_genomes_project 7 82251346 82254245 - Mfge8 protein_coding processed_transcript MGP_LPJ_T0083385.1 MGP_LPJ_G0032080.1 mouse_genomes_project 7 45470550 45532629 - MGP_LPJ_P0083385 protein_coding protein_coding MGP_LPJ_T0010908.1 MGP_LPJ_G0009026.1 mouse_genomes_project 7 63999784 63999854 - Gm23873 miRNA miRNA MGP_LPJ_T0082460.1 MGP_LPJ_G0031868.1 mouse_genomes_project 7 28056792 28068225 + MGP_LPJ_P0082460 Capn12 protein_coding protein_coding MGP_LPJ_T0087473.1 MGP_LPJ_G0033170.1 mouse_genomes_project 7 149082264 149095043 - Ifitm10 protein_coding processed_transcript MGP_LPJ_T0087474.1 MGP_LPJ_G0033170.1 mouse_genomes_project 7 149082537 149134854 - MGP_LPJ_P0087474 Ifitm10 protein_coding protein_coding MGP_LPJ_T0087475.1 MGP_LPJ_G0033170.1 mouse_genomes_project 7 149082557 149134682 - Ifitm10 protein_coding processed_transcript MGP_LPJ_T0087476.1 MGP_LPJ_G0033170.1 mouse_genomes_project 7 149115771 149134672 - MGP_LPJ_P0087476 Ifitm10 protein_coding protein_coding MGP_LPJ_T0087477.1 MGP_LPJ_G0033170.1 mouse_genomes_project 7 149116185 149136166 - MGP_LPJ_P0087477 Ifitm10 protein_coding protein_coding MGP_LPJ_T0087478.1 MGP_LPJ_G0033170.1 mouse_genomes_project 7 149133555 149135294 - Ifitm10 protein_coding processed_transcript MGP_LPJ_T0002298.1 MGP_LPJ_G0002206.1 mouse_genomes_project 7 82435773 82439673 + TEC TEC MGP_LPJ_T0081610.1 MGP_LPJ_G0031627.1 mouse_genomes_project 7 15011582 15016159 + MGP_LPJ_P0081610 Ccdc8 protein_coding protein_coding MGP_LPJ_T0084654.1 MGP_LPJ_G0032394.1 mouse_genomes_project 7 90364135 90375544 + MGP_LPJ_P0084654 Vmn2r77 protein_coding protein_coding MGP_LPJ_T0099691.1 MGP_LPJ_G0037954.1 mouse_genomes_project 7 1775593 1775695 + Gm24537 snRNA snRNA MGP_LPJ_T0005306.1 MGP_LPJ_G0004502.1 mouse_genomes_project 7 126786743 126882420 - Gm45077 antisense antisense MGP_LPJ_T0082842.1 MGP_LPJ_G0031953.1 mouse_genomes_project 7 30302618 30304720 - MGP_LPJ_P0082842 Hamp protein_coding protein_coding MGP_LPJ_T0084106.1 MGP_LPJ_G0032263.1 mouse_genomes_project 7 69698644 69704577 + MGP_LPJ_P0084106 Lysmd4 protein_coding protein_coding MGP_LPJ_T0084107.1 MGP_LPJ_G0032263.1 mouse_genomes_project 7 69698716 69704577 + MGP_LPJ_P0084107 Lysmd4 protein_coding protein_coding MGP_LPJ_T0005199.1 MGP_LPJ_G0004426.1 mouse_genomes_project 7 26067282 26073305 - Gm15883 antisense antisense MGP_LPJ_T0081240.1 MGP_LPJ_G0031485.1 mouse_genomes_project 7 2113673 2115864 + MGP_LPJ_P0081240 Zfp580 protein_coding protein_coding MGP_LPJ_T0015691.1 MGP_LPJ_G0013782.1 mouse_genomes_project 7 24188537 24189211 - processed_pseudogene processed_pseudogene MGP_LPJ_T0081232.1 MGP_LPJ_G0031479.1 mouse_genomes_project 7 2067587 2074860 - MGP_LPJ_P0081232 Fiz1 protein_coding protein_coding MGP_LPJ_T0081233.1 MGP_LPJ_G0031479.1 mouse_genomes_project 7 2067587 2073871 - MGP_LPJ_P0081233 Fiz1 protein_coding protein_coding MGP_LPJ_T0081234.1 MGP_LPJ_G0031479.1 mouse_genomes_project 7 2067587 2075304 - MGP_LPJ_P0081234 Fiz1 protein_coding protein_coding MGP_LPJ_T0083264.1 MGP_LPJ_G0032053.1 mouse_genomes_project 7 44774119 44780345 + MGP_LPJ_P0083264 Klk1b9 protein_coding protein_coding MGP_LPJ_T0015818.1 MGP_LPJ_G0013909.1 mouse_genomes_project 7 101618387 101619097 - processed_pseudogene processed_pseudogene MGP_LPJ_T0085506.1 MGP_LPJ_G0032690.1 mouse_genomes_project 7 111807176 111808136 + MGP_LPJ_P0085506 Olfr703 protein_coding protein_coding MGP_LPJ_T0086351.1 MGP_LPJ_G0032915.1 mouse_genomes_project 7 132550208 132554286 + MGP_LPJ_P0086351 Tbx6 protein_coding protein_coding MGP_LPJ_T0086352.1 MGP_LPJ_G0032915.1 mouse_genomes_project 7 132550208 132554085 + MGP_LPJ_P0086352 Tbx6 protein_coding protein_coding MGP_LPJ_T0085356.1 MGP_LPJ_G0032629.1 mouse_genomes_project 7 109001061 109002003 + MGP_LPJ_P0085356 Olfr651 protein_coding protein_coding MGP_LPJ_T0086702.1 MGP_LPJ_G0032983.1 mouse_genomes_project 7 133789239 133792121 - Prss36 protein_coding processed_transcript MGP_LPJ_T0086703.1 MGP_LPJ_G0032983.1 mouse_genomes_project 7 133789239 133792081 - Prss36 protein_coding processed_transcript MGP_LPJ_T0086704.1 MGP_LPJ_G0032983.1 mouse_genomes_project 7 133789239 133803898 - MGP_LPJ_P0086704 Prss36 protein_coding protein_coding MGP_LPJ_T0086705.1 MGP_LPJ_G0032983.1 mouse_genomes_project 7 133789239 133803898 - MGP_LPJ_P0086705 Prss36 protein_coding protein_coding MGP_LPJ_T0086706.1 MGP_LPJ_G0032983.1 mouse_genomes_project 7 133789400 133792052 - MGP_LPJ_P0086706 Prss36 protein_coding protein_coding MGP_LPJ_T0086707.1 MGP_LPJ_G0032983.1 mouse_genomes_project 7 133789503 133792031 - MGP_LPJ_P0086707 Prss36 protein_coding protein_coding MGP_LPJ_T0086708.1 MGP_LPJ_G0032983.1 mouse_genomes_project 7 133789561 133792699 - Prss36 protein_coding retained_intron MGP_LPJ_T0086709.1 MGP_LPJ_G0032983.1 mouse_genomes_project 7 133789608 133792116 - Prss36 protein_coding processed_transcript MGP_LPJ_T0083695.1 MGP_LPJ_G0032162.1 mouse_genomes_project 7 46951540 46954385 - MGP_LPJ_P0083695 Emp3 protein_coding protein_coding MGP_LPJ_T0083696.1 MGP_LPJ_G0032162.1 mouse_genomes_project 7 46951540 46954962 - MGP_LPJ_P0083696 Emp3 protein_coding protein_coding MGP_LPJ_T0015719.1 MGP_LPJ_G0013810.1 mouse_genomes_project 7 34025429 34025843 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008828.1 MGP_LPJ_G0007132.1 mouse_genomes_project 7 23896588 23900767 + D930028M14Rik lincRNA lincRNA MGP_LPJ_T0008829.1 MGP_LPJ_G0007132.1 mouse_genomes_project 7 23899206 23900358 + D930028M14Rik lincRNA lincRNA MGP_LPJ_T0085573.1 MGP_LPJ_G0032750.1 mouse_genomes_project 7 113835206 113836208 - MGP_LPJ_P0085573 Olfr518 protein_coding protein_coding MGP_LPJ_T0087614.1 MGP_LPJ_G0033192.1 mouse_genomes_project 7 150377487 150420361 - MGP_LPJ_P0087614 Cars protein_coding protein_coding MGP_LPJ_T0087615.1 MGP_LPJ_G0033192.1 mouse_genomes_project 7 150377964 150420327 - MGP_LPJ_P0087615 Cars protein_coding protein_coding MGP_LPJ_T0087616.1 MGP_LPJ_G0033192.1 mouse_genomes_project 7 150382008 150388651 - Cars protein_coding processed_transcript MGP_LPJ_T0087617.1 MGP_LPJ_G0033192.1 mouse_genomes_project 7 150384854 150389417 - Cars protein_coding retained_intron MGP_LPJ_T0087618.1 MGP_LPJ_G0033192.1 mouse_genomes_project 7 150389227 150390494 - Cars protein_coding processed_transcript MGP_LPJ_T0087619.1 MGP_LPJ_G0033192.1 mouse_genomes_project 7 150390342 150394908 - Cars protein_coding retained_intron MGP_LPJ_T0087620.1 MGP_LPJ_G0033192.1 mouse_genomes_project 7 150406019 150417023 - Cars protein_coding processed_transcript MGP_LPJ_T0087621.1 MGP_LPJ_G0033192.1 mouse_genomes_project 7 150407420 150419952 - Cars protein_coding processed_transcript MGP_LPJ_T0087622.1 MGP_LPJ_G0033192.1 mouse_genomes_project 7 150412695 150420302 - Cars protein_coding processed_transcript MGP_LPJ_T0085496.1 MGP_LPJ_G0032681.1 mouse_genomes_project 7 111631002 111631954 - MGP_LPJ_P0085496 Olfr693 protein_coding protein_coding MGP_LPJ_T0005239.1 MGP_LPJ_G0004456.1 mouse_genomes_project 7 46536251 46537333 - antisense antisense MGP_LPJ_T0005161.1 MGP_LPJ_G0004403.1 mouse_genomes_project 7 599337 605474 + Gm15929 antisense antisense MGP_LPJ_T0085380.1 MGP_LPJ_G0032652.1 mouse_genomes_project 7 109704577 109705525 + MGP_LPJ_P0085380 Olfr681 protein_coding protein_coding MGP_LPJ_T0010962.1 MGP_LPJ_G0009080.1 mouse_genomes_project 7 150896207 150896292 + Mir3105 miRNA miRNA MGP_LPJ_T0081376.1 MGP_LPJ_G0031558.1 mouse_genomes_project 7 10412198 10416595 + MGP_LPJ_P0081376 Rps5 protein_coding protein_coding MGP_LPJ_T0081377.1 MGP_LPJ_G0031558.1 mouse_genomes_project 7 10412198 10416594 + MGP_LPJ_P0081377 Rps5 protein_coding protein_coding MGP_LPJ_T0081378.1 MGP_LPJ_G0031558.1 mouse_genomes_project 7 10412226 10416403 + MGP_LPJ_P0081378 Rps5 protein_coding protein_coding MGP_LPJ_T0081379.1 MGP_LPJ_G0031558.1 mouse_genomes_project 7 10412239 10416128 + Rps5 protein_coding retained_intron MGP_LPJ_T0081380.1 MGP_LPJ_G0031558.1 mouse_genomes_project 7 10412244 10413273 + Rps5 protein_coding retained_intron MGP_LPJ_T0081381.1 MGP_LPJ_G0031558.1 mouse_genomes_project 7 10412345 10416403 + MGP_LPJ_P0081381 Rps5 protein_coding protein_coding MGP_LPJ_T0081382.1 MGP_LPJ_G0031558.1 mouse_genomes_project 7 10415945 10416593 + Rps5 protein_coding retained_intron MGP_LPJ_T0081684.1 MGP_LPJ_G0031659.1 mouse_genomes_project 7 17372479 17379029 + MGP_LPJ_P0081684 Dmwd protein_coding protein_coding MGP_LPJ_T0081685.1 MGP_LPJ_G0031659.1 mouse_genomes_project 7 17372510 17379029 + MGP_LPJ_P0081685 Dmwd protein_coding protein_coding MGP_LPJ_T0081686.1 MGP_LPJ_G0031659.1 mouse_genomes_project 7 17374244 17379028 + Dmwd protein_coding processed_transcript MGP_LPJ_T0081687.1 MGP_LPJ_G0031659.1 mouse_genomes_project 7 17374277 17378755 + Dmwd protein_coding processed_transcript MGP_LPJ_T0008814.1 MGP_LPJ_G0007120.1 mouse_genomes_project 7 10437902 10451807 - 1810019N24Rik lincRNA lincRNA MGP_LPJ_T0008815.1 MGP_LPJ_G0007120.1 mouse_genomes_project 7 10439000 10439377 - 1810019N24Rik lincRNA lincRNA MGP_LPJ_T0081294.1 MGP_LPJ_G0031507.1 mouse_genomes_project 7 3592809 3630473 + MGP_LPJ_P0081294 Smim17 protein_coding protein_coding MGP_LPJ_T0081295.1 MGP_LPJ_G0031507.1 mouse_genomes_project 7 3592842 3606882 + Smim17 protein_coding processed_transcript MGP_LPJ_T0081297.1 MGP_LPJ_G0031507.1 mouse_genomes_project 7 3616375 3633116 + MGP_LPJ_P0081297 Smim17 protein_coding protein_coding MGP_LPJ_T0085772.1 MGP_LPJ_G0032801.1 mouse_genomes_project 7 119817150 119822014 - MGP_LPJ_P0085772 Calca protein_coding protein_coding MGP_LPJ_T0085773.1 MGP_LPJ_G0032801.1 mouse_genomes_project 7 119817240 119818318 - Calca protein_coding retained_intron MGP_LPJ_T0085774.1 MGP_LPJ_G0032801.1 mouse_genomes_project 7 119818224 119821964 - MGP_LPJ_P0085774 Calca protein_coding protein_coding MGP_LPJ_T0085775.1 MGP_LPJ_G0032801.1 mouse_genomes_project 7 119818949 119821969 - MGP_LPJ_P0085775 Calca protein_coding protein_coding MGP_LPJ_T0085776.1 MGP_LPJ_G0032801.1 mouse_genomes_project 7 119819066 119821952 - MGP_LPJ_P0085776 Calca protein_coding protein_coding MGP_LPJ_T0085777.1 MGP_LPJ_G0032801.1 mouse_genomes_project 7 119819997 119821963 - MGP_LPJ_P0085777 Calca protein_coding protein_coding MGP_LPJ_T0085778.1 MGP_LPJ_G0032801.1 mouse_genomes_project 7 119820028 119821928 - MGP_LPJ_P0085778 Calca protein_coding protein_coding MGP_LPJ_T0085703.1 MGP_LPJ_G0032782.1 mouse_genomes_project 7 116516584 116833372 - MGP_LPJ_P0085703 Galnt18 protein_coding protein_coding MGP_LPJ_T0085704.1 MGP_LPJ_G0032782.1 mouse_genomes_project 7 116516584 116833372 - MGP_LPJ_P0085704 Galnt18 protein_coding protein_coding MGP_LPJ_T0010924.1 MGP_LPJ_G0009042.1 mouse_genomes_project 7 82642236 82642326 + Mir9-3 miRNA miRNA MGP_LPJ_T0081194.1 MGP_LPJ_G0031465.1 mouse_genomes_project 7 1814156 1819958 - MGP_LPJ_P0081194 Il11 protein_coding protein_coding MGP_LPJ_T0081195.1 MGP_LPJ_G0031465.1 mouse_genomes_project 7 1815017 1824517 - MGP_LPJ_P0081195 Il11 protein_coding protein_coding MGP_LPJ_T0009057.1 MGP_LPJ_G0007289.1 mouse_genomes_project 7 135796388 135819088 + Gm44778 lincRNA lincRNA MGP_LPJ_T0008931.1 MGP_LPJ_G0007212.1 mouse_genomes_project 7 76084460 76089268 + 4930429H19Rik lincRNA lincRNA MGP_LPJ_T0008932.1 MGP_LPJ_G0007212.1 mouse_genomes_project 7 76084610 76086035 + 4930429H19Rik lincRNA lincRNA MGP_LPJ_T0018355.1 MGP_LPJ_G0015601.1 mouse_genomes_project 7 110503614 110507147 + processed_transcript processed_transcript MGP_LPJ_T0100965.1 MGP_LPJ_G0039228.1 mouse_genomes_project 7 61287941 61288010 - snoRNA snoRNA MGP_LPJ_T0010862.1 MGP_LPJ_G0008980.1 mouse_genomes_project 7 21890777 21890882 + Gm25196 miRNA miRNA MGP_LPJ_T0084904.1 MGP_LPJ_G0032455.1 mouse_genomes_project 7 103380255 103450358 + MGP_LPJ_P0084904 Map6 protein_coding protein_coding MGP_LPJ_T0084905.1 MGP_LPJ_G0032455.1 mouse_genomes_project 7 103380255 103450358 + MGP_LPJ_P0084905 Map6 protein_coding protein_coding MGP_LPJ_T0084906.1 MGP_LPJ_G0032455.1 mouse_genomes_project 7 103380297 103433853 + Map6 protein_coding retained_intron MGP_LPJ_T0084907.1 MGP_LPJ_G0032455.1 mouse_genomes_project 7 103381154 103450359 + MGP_LPJ_P0084907 Map6 protein_coding protein_coding MGP_LPJ_T0084908.1 MGP_LPJ_G0032455.1 mouse_genomes_project 7 103434682 103435938 + Map6 protein_coding processed_transcript MGP_LPJ_T0099736.1 MGP_LPJ_G0037999.1 mouse_genomes_project 7 126484744 126484847 - Gm25924 snRNA snRNA MGP_LPJ_T0083915.1 MGP_LPJ_G0032222.1 mouse_genomes_project 7 57843780 57889376 - MGP_LPJ_P0083915 Nipa1 protein_coding protein_coding MGP_LPJ_T0087035.1 MGP_LPJ_G0033049.1 mouse_genomes_project 7 141798326 141801575 + MGP_LPJ_P0087035 Foxi2 protein_coding protein_coding MGP_LPJ_T0080963.1 MGP_LPJ_G0031426.1 mouse_genomes_project 7 542018 548352 - MGP_LPJ_P0080963 Oscar protein_coding protein_coding MGP_LPJ_T0080964.1 MGP_LPJ_G0031426.1 mouse_genomes_project 7 542018 548376 - MGP_LPJ_P0080964 Oscar protein_coding protein_coding MGP_LPJ_T0080965.1 MGP_LPJ_G0031426.1 mouse_genomes_project 7 542018 548376 - MGP_LPJ_P0080965 Oscar protein_coding protein_coding MGP_LPJ_T0080966.1 MGP_LPJ_G0031426.1 mouse_genomes_project 7 543376 548304 - Oscar protein_coding processed_transcript MGP_LPJ_T0087243.1 MGP_LPJ_G0033121.1 mouse_genomes_project 7 147659981 147661166 - MGP_LPJ_P0087243 Ifitm3 protein_coding protein_coding MGP_LPJ_T0083254.1 MGP_LPJ_G0032048.1 mouse_genomes_project 7 44596021 44603537 + MGP_LPJ_P0083254 Klk6 protein_coding protein_coding MGP_LPJ_T0083255.1 MGP_LPJ_G0032048.1 mouse_genomes_project 7 44596080 44603293 + MGP_LPJ_P0083255 Klk6 protein_coding protein_coding MGP_LPJ_T0083256.1 MGP_LPJ_G0032048.1 mouse_genomes_project 7 44596092 44600064 + MGP_LPJ_P0083256 Klk6 protein_coding protein_coding MGP_LPJ_T0083257.1 MGP_LPJ_G0032048.1 mouse_genomes_project 7 44596878 44603293 + MGP_LPJ_P0083257 Klk6 protein_coding protein_coding MGP_LPJ_T0009058.1 MGP_LPJ_G0007290.1 mouse_genomes_project 7 135935119 135951789 + Gm4265 lincRNA lincRNA MGP_LPJ_T0008823.1 MGP_LPJ_G0007127.1 mouse_genomes_project 7 17945071 17951798 - Gm26890 lincRNA lincRNA MGP_LPJ_T0085501.1 MGP_LPJ_G0032686.1 mouse_genomes_project 7 111753318 111754269 - MGP_LPJ_P0085501 Olfr699 protein_coding protein_coding MGP_LPJ_T0099697.1 MGP_LPJ_G0037960.1 mouse_genomes_project 7 16709366 16709473 + Gm26062 snRNA snRNA MGP_LPJ_T0083954.1 MGP_LPJ_G0032230.1 mouse_genomes_project 7 61910315 61950768 - MGP_LPJ_P0083954 protein_coding nonsense_mediated_decay MGP_LPJ_T0083955.1 MGP_LPJ_G0032230.1 mouse_genomes_project 7 61910315 61950768 - MGP_LPJ_P0083955 protein_coding nonsense_mediated_decay MGP_LPJ_T0083956.1 MGP_LPJ_G0032230.1 mouse_genomes_project 7 61919178 61923157 - protein_coding processed_transcript MGP_LPJ_T0083957.1 MGP_LPJ_G0032230.1 mouse_genomes_project 7 61922990 61923413 - protein_coding processed_transcript MGP_LPJ_T0084674.1 MGP_LPJ_G0032401.1 mouse_genomes_project 7 92050988 92121099 + MGP_LPJ_P0084674 Rab38 protein_coding protein_coding MGP_LPJ_T0085307.1 MGP_LPJ_G0032608.1 mouse_genomes_project 7 108600070 108601015 - MGP_LPJ_P0085307 Olfr642 protein_coding protein_coding MGP_LPJ_T0015764.1 MGP_LPJ_G0013855.1 mouse_genomes_project 7 58703733 58704592 - processed_pseudogene processed_pseudogene MGP_LPJ_T0086353.1 MGP_LPJ_G0032916.1 mouse_genomes_project 7 132554591 132561222 - MGP_LPJ_P0086353 Ppp4c protein_coding protein_coding MGP_LPJ_T0086354.1 MGP_LPJ_G0032916.1 mouse_genomes_project 7 132554593 132561066 - MGP_LPJ_P0086354 Ppp4c protein_coding protein_coding MGP_LPJ_T0086355.1 MGP_LPJ_G0032916.1 mouse_genomes_project 7 132554884 132557136 - MGP_LPJ_P0086355 Ppp4c protein_coding protein_coding MGP_LPJ_T0086356.1 MGP_LPJ_G0032916.1 mouse_genomes_project 7 132554954 132556065 - MGP_LPJ_P0086356 Ppp4c protein_coding protein_coding MGP_LPJ_T0086357.1 MGP_LPJ_G0032916.1 mouse_genomes_project 7 132555014 132561219 - MGP_LPJ_P0086357 Ppp4c protein_coding nonsense_mediated_decay MGP_LPJ_T0086358.1 MGP_LPJ_G0032916.1 mouse_genomes_project 7 132555945 132557770 - MGP_LPJ_P0086358 Ppp4c protein_coding protein_coding MGP_LPJ_T0086359.1 MGP_LPJ_G0032916.1 mouse_genomes_project 7 132556193 132560873 - MGP_LPJ_P0086359 Ppp4c protein_coding nonsense_mediated_decay MGP_LPJ_T0086360.1 MGP_LPJ_G0032916.1 mouse_genomes_project 7 132556296 132557743 - Ppp4c protein_coding retained_intron MGP_LPJ_T0086361.1 MGP_LPJ_G0032916.1 mouse_genomes_project 7 132556389 132561192 - Ppp4c protein_coding retained_intron MGP_LPJ_T0086362.1 MGP_LPJ_G0032916.1 mouse_genomes_project 7 132559238 132561222 - Ppp4c protein_coding retained_intron MGP_LPJ_T0086363.1 MGP_LPJ_G0032916.1 mouse_genomes_project 7 132559262 132561208 - Ppp4c protein_coding retained_intron MGP_LPJ_T0081573.1 MGP_LPJ_G0031619.1 mouse_genomes_project 7 14807140 14832453 + MGP_LPJ_P0081573 Strn4 protein_coding protein_coding MGP_LPJ_T0081574.1 MGP_LPJ_G0031619.1 mouse_genomes_project 7 14807569 14832449 + MGP_LPJ_P0081574 Strn4 protein_coding protein_coding MGP_LPJ_T0081575.1 MGP_LPJ_G0031619.1 mouse_genomes_project 7 14807630 14820066 + MGP_LPJ_P0081575 Strn4 protein_coding nonsense_mediated_decay MGP_LPJ_T0081576.1 MGP_LPJ_G0031619.1 mouse_genomes_project 7 14813309 14815447 + Strn4 protein_coding processed_transcript MGP_LPJ_T0081577.1 MGP_LPJ_G0031619.1 mouse_genomes_project 7 14814338 14825261 + MGP_LPJ_P0081577 Strn4 protein_coding nonsense_mediated_decay MGP_LPJ_T0081578.1 MGP_LPJ_G0031619.1 mouse_genomes_project 7 14815323 14820003 + Strn4 protein_coding retained_intron MGP_LPJ_T0081579.1 MGP_LPJ_G0031619.1 mouse_genomes_project 7 14820030 14822891 + Strn4 protein_coding retained_intron MGP_LPJ_T0081580.1 MGP_LPJ_G0031619.1 mouse_genomes_project 7 14821398 14822761 + Strn4 protein_coding processed_transcript MGP_LPJ_T0081581.1 MGP_LPJ_G0031619.1 mouse_genomes_project 7 14822350 14829509 + MGP_LPJ_P0081581 Strn4 protein_coding nonsense_mediated_decay MGP_LPJ_T0081582.1 MGP_LPJ_G0031619.1 mouse_genomes_project 7 14823900 14825277 + Strn4 protein_coding retained_intron MGP_LPJ_T0081583.1 MGP_LPJ_G0031619.1 mouse_genomes_project 7 14824451 14825942 + Strn4 protein_coding retained_intron MGP_LPJ_T0081584.1 MGP_LPJ_G0031619.1 mouse_genomes_project 7 14827745 14832453 + Strn4 protein_coding retained_intron MGP_LPJ_T0081585.1 MGP_LPJ_G0031619.1 mouse_genomes_project 7 14829161 14831758 + MGP_LPJ_P0081585 Strn4 protein_coding protein_coding MGP_LPJ_T0081586.1 MGP_LPJ_G0031619.1 mouse_genomes_project 7 14830081 14831540 + Strn4 protein_coding retained_intron MGP_LPJ_T0083494.1 MGP_LPJ_G0032115.1 mouse_genomes_project 7 46105423 46128256 - MGP_LPJ_P0083494 Ccdc155 protein_coding protein_coding MGP_LPJ_T0083495.1 MGP_LPJ_G0032115.1 mouse_genomes_project 7 46105727 46111842 - Ccdc155 protein_coding retained_intron MGP_LPJ_T0081870.1 MGP_LPJ_G0031716.1 mouse_genomes_project 7 22485517 22486608 + MGP_LPJ_P0081870 Vmn1r178 protein_coding protein_coding MGP_LPJ_T0015841.1 MGP_LPJ_G0013932.1 mouse_genomes_project 7 112130061 112131508 - processed_pseudogene processed_pseudogene MGP_LPJ_T0086663.1 MGP_LPJ_G0032974.1 mouse_genomes_project 7 133672540 133702514 + Stx4a protein_coding processed_transcript MGP_LPJ_T0086664.1 MGP_LPJ_G0032974.1 mouse_genomes_project 7 133695920 133702514 + MGP_LPJ_P0086664 Stx4a protein_coding protein_coding MGP_LPJ_T0086665.1 MGP_LPJ_G0032974.1 mouse_genomes_project 7 133696124 133702495 + MGP_LPJ_P0086665 Stx4a protein_coding protein_coding MGP_LPJ_T0086666.1 MGP_LPJ_G0032974.1 mouse_genomes_project 7 133696126 133698101 + Stx4a protein_coding retained_intron MGP_LPJ_T0086667.1 MGP_LPJ_G0032974.1 mouse_genomes_project 7 133696134 133700775 + MGP_LPJ_P0086667 Stx4a protein_coding nonsense_mediated_decay MGP_LPJ_T0086668.1 MGP_LPJ_G0032974.1 mouse_genomes_project 7 133696841 133700743 + Stx4a protein_coding retained_intron MGP_LPJ_T0086669.1 MGP_LPJ_G0032974.1 mouse_genomes_project 7 133697754 133702171 + Stx4a protein_coding retained_intron MGP_LPJ_T0086670.1 MGP_LPJ_G0032974.1 mouse_genomes_project 7 133699940 133701992 + Stx4a protein_coding retained_intron MGP_LPJ_T0086671.1 MGP_LPJ_G0032974.1 mouse_genomes_project 7 133701884 133702514 + Stx4a protein_coding retained_intron MGP_LPJ_T0085028.1 MGP_LPJ_G0032486.1 mouse_genomes_project 7 105132151 105194974 - MGP_LPJ_P0085028 Arhgef17 protein_coding protein_coding MGP_LPJ_T0085029.1 MGP_LPJ_G0032486.1 mouse_genomes_project 7 105132181 105157022 - MGP_LPJ_P0085029 Arhgef17 protein_coding unknown_likely_coding MGP_LPJ_T0084781.1 MGP_LPJ_G0032430.1 mouse_genomes_project 7 101385346 101410288 + MGP_LPJ_P0084781 Alg8 protein_coding protein_coding MGP_LPJ_T0084782.1 MGP_LPJ_G0032430.1 mouse_genomes_project 7 101404773 101409854 + Alg8 protein_coding retained_intron MGP_LPJ_T0084783.1 MGP_LPJ_G0032430.1 mouse_genomes_project 7 101405030 101410188 + Alg8 protein_coding processed_transcript MGP_LPJ_T0084784.1 MGP_LPJ_G0032430.1 mouse_genomes_project 7 101405358 101409751 + Alg8 protein_coding processed_transcript MGP_LPJ_T0084785.1 MGP_LPJ_G0032430.1 mouse_genomes_project 7 101406178 101409912 + Alg8 protein_coding retained_intron MGP_LPJ_T0084786.1 MGP_LPJ_G0032430.1 mouse_genomes_project 7 101408889 101409995 + Alg8 protein_coding retained_intron MGP_LPJ_T0015671.1 MGP_LPJ_G0013762.1 mouse_genomes_project 7 13817348 13818308 + processed_pseudogene processed_pseudogene MGP_LPJ_T0083941.1 MGP_LPJ_G0032229.1 mouse_genomes_project 7 61170197 61194887 + MGP_LPJ_P0083941 Ube3a protein_coding protein_coding MGP_LPJ_T0083942.1 MGP_LPJ_G0032229.1 mouse_genomes_project 7 61170197 61219737 + MGP_LPJ_P0083942 Ube3a protein_coding protein_coding MGP_LPJ_T0083943.1 MGP_LPJ_G0032229.1 mouse_genomes_project 7 61170217 61234856 + Ube3a protein_coding retained_intron MGP_LPJ_T0083944.1 MGP_LPJ_G0032229.1 mouse_genomes_project 7 61170572 61223732 + Ube3a protein_coding processed_transcript MGP_LPJ_T0083945.1 MGP_LPJ_G0032229.1 mouse_genomes_project 7 61170620 61195230 + Ube3a protein_coding processed_transcript MGP_LPJ_T0083946.1 MGP_LPJ_G0032229.1 mouse_genomes_project 7 61170678 61223995 + MGP_LPJ_P0083946 Ube3a protein_coding protein_coding MGP_LPJ_T0083947.1 MGP_LPJ_G0032229.1 mouse_genomes_project 7 61190596 61219647 + MGP_LPJ_P0083947 Ube3a protein_coding protein_coding MGP_LPJ_T0083948.1 MGP_LPJ_G0032229.1 mouse_genomes_project 7 61191138 61250837 + MGP_LPJ_P0083948 Ube3a protein_coding protein_coding MGP_LPJ_T0083949.1 MGP_LPJ_G0032229.1 mouse_genomes_project 7 61224578 61228625 + Ube3a protein_coding retained_intron MGP_LPJ_T0083950.1 MGP_LPJ_G0032229.1 mouse_genomes_project 7 61229859 61233164 + Ube3a protein_coding retained_intron MGP_LPJ_T0083951.1 MGP_LPJ_G0032229.1 mouse_genomes_project 7 61233579 61245467 + MGP_LPJ_P0083951 Ube3a protein_coding protein_coding MGP_LPJ_T0083952.1 MGP_LPJ_G0032229.1 mouse_genomes_project 7 61234335 61245477 + MGP_LPJ_P0083952 Ube3a protein_coding protein_coding MGP_LPJ_T0083953.1 MGP_LPJ_G0032229.1 mouse_genomes_project 7 61244045 61245479 + Ube3a protein_coding retained_intron MGP_LPJ_T0084145.1 MGP_LPJ_G0032270.1 mouse_genomes_project 7 71282890 71295089 - MGP_LPJ_P0084145 Arrdc4 protein_coding protein_coding MGP_LPJ_T0084146.1 MGP_LPJ_G0032270.1 mouse_genomes_project 7 71287358 71290754 - Arrdc4 protein_coding retained_intron MGP_LPJ_T0084147.1 MGP_LPJ_G0032270.1 mouse_genomes_project 7 71287450 71295036 - MGP_LPJ_P0084147 Arrdc4 protein_coding protein_coding MGP_LPJ_T0082344.1 MGP_LPJ_G0031839.1 mouse_genomes_project 7 27379603 27382027 + MGP_LPJ_P0082344 Eid2b protein_coding protein_coding MGP_LPJ_T0085230.1 MGP_LPJ_G0032537.1 mouse_genomes_project 7 107199846 107201906 + MGP_LPJ_P0085230 Olfr562-ps1 protein_coding protein_coding MGP_LPJ_T0085548.1 MGP_LPJ_G0032725.1 mouse_genomes_project 7 113001815 113002754 + MGP_LPJ_P0085548 Olfr481 protein_coding protein_coding MGP_LPJ_T0084875.1 MGP_LPJ_G0032448.1 mouse_genomes_project 7 102549871 102558858 + MGP_LPJ_P0084875 Lrrc32 protein_coding protein_coding MGP_LPJ_T0084876.1 MGP_LPJ_G0032448.1 mouse_genomes_project 7 102550297 102562790 + MGP_LPJ_P0084876 Lrrc32 protein_coding protein_coding MGP_LPJ_T0084877.1 MGP_LPJ_G0032448.1 mouse_genomes_project 7 102554825 102562444 + MGP_LPJ_P0084877 Lrrc32 protein_coding protein_coding MGP_LPJ_T0087463.1 MGP_LPJ_G0033161.1 mouse_genomes_project 7 148706147 148764155 - MGP_LPJ_P0087463 Mob2 protein_coding protein_coding MGP_LPJ_T0082843.1 MGP_LPJ_G0031954.1 mouse_genomes_project 7 30302622 30304720 - MGP_LPJ_P0082843 protein_coding protein_coding MGP_LPJ_T0015659.1 MGP_LPJ_G0013750.1 mouse_genomes_project 7 10215801 10216788 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005329.1 MGP_LPJ_G0004520.1 mouse_genomes_project 7 138327223 138328354 + Gm15677 antisense antisense MGP_LPJ_T0081171.1 MGP_LPJ_G0031462.1 mouse_genomes_project 7 1776862 1784316 + MGP_LPJ_P0081171 Suv420h2 protein_coding protein_coding MGP_LPJ_T0081172.1 MGP_LPJ_G0031462.1 mouse_genomes_project 7 1776900 1778837 + Suv420h2 protein_coding retained_intron MGP_LPJ_T0081173.1 MGP_LPJ_G0031462.1 mouse_genomes_project 7 1776903 1779802 + MGP_LPJ_P0081173 Suv420h2 protein_coding protein_coding MGP_LPJ_T0081174.1 MGP_LPJ_G0031462.1 mouse_genomes_project 7 1776914 1784316 + MGP_LPJ_P0081174 Suv420h2 protein_coding protein_coding MGP_LPJ_T0081175.1 MGP_LPJ_G0031462.1 mouse_genomes_project 7 1776932 1784316 + MGP_LPJ_P0081175 Suv420h2 protein_coding protein_coding MGP_LPJ_T0081176.1 MGP_LPJ_G0031462.1 mouse_genomes_project 7 1778383 1779286 + Suv420h2 protein_coding retained_intron MGP_LPJ_T0081177.1 MGP_LPJ_G0031462.1 mouse_genomes_project 7 1778598 1783700 + MGP_LPJ_P0081177 Suv420h2 protein_coding nonsense_mediated_decay MGP_LPJ_T0081178.1 MGP_LPJ_G0031462.1 mouse_genomes_project 7 1779072 1782710 + Suv420h2 protein_coding retained_intron MGP_LPJ_T0081179.1 MGP_LPJ_G0031462.1 mouse_genomes_project 7 1779202 1780271 + Suv420h2 protein_coding retained_intron MGP_LPJ_T0081180.1 MGP_LPJ_G0031462.1 mouse_genomes_project 7 1779405 1780395 + Suv420h2 protein_coding retained_intron MGP_LPJ_T0081181.1 MGP_LPJ_G0031462.1 mouse_genomes_project 7 1779492 1782923 + Suv420h2 protein_coding retained_intron MGP_LPJ_T0081182.1 MGP_LPJ_G0031462.1 mouse_genomes_project 7 1782609 1783398 + MGP_LPJ_P0081182 Suv420h2 protein_coding protein_coding MGP_LPJ_T0018354.1 MGP_LPJ_G0015600.1 mouse_genomes_project 7 105600859 105611372 - Gm20476 processed_transcript processed_transcript MGP_LPJ_T0081642.1 MGP_LPJ_G0031641.1 mouse_genomes_project 7 16645892 16689741 - MGP_LPJ_P0081642 Psg25 protein_coding protein_coding MGP_LPJ_T0010893.1 MGP_LPJ_G0009011.1 mouse_genomes_project 7 49103843 49103953 + Gm22427 miRNA miRNA MGP_LPJ_T0102398.1 MGP_LPJ_G0040434.1 mouse_genomes_project 7 49457987 49458443 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0082226.1 MGP_LPJ_G0031808.1 mouse_genomes_project 7 26225294 26233652 + Numbl protein_coding processed_transcript MGP_LPJ_T0082227.1 MGP_LPJ_G0031808.1 mouse_genomes_project 7 26225586 26248720 + MGP_LPJ_P0082227 Numbl protein_coding protein_coding MGP_LPJ_T0082228.1 MGP_LPJ_G0031808.1 mouse_genomes_project 7 26225644 26231809 + Numbl protein_coding processed_transcript MGP_LPJ_T0082229.1 MGP_LPJ_G0031808.1 mouse_genomes_project 7 26225667 26248723 + Numbl protein_coding retained_intron MGP_LPJ_T0082230.1 MGP_LPJ_G0031808.1 mouse_genomes_project 7 26228221 26248560 + Numbl protein_coding retained_intron MGP_LPJ_T0008817.1 MGP_LPJ_G0007122.1 mouse_genomes_project 7 14588822 14592925 - lincRNA lincRNA MGP_LPJ_T0087560.1 MGP_LPJ_G0033180.1 mouse_genomes_project 7 149619886 149638223 + MGP_LPJ_P0087560 protein_coding protein_coding MGP_LPJ_T0087561.1 MGP_LPJ_G0033180.1 mouse_genomes_project 7 149635732 149637422 + protein_coding processed_transcript MGP_LPJ_T0018368.1 MGP_LPJ_G0015608.1 mouse_genomes_project 7 132664181 132669796 + Gm20650 processed_transcript processed_transcript MGP_LPJ_T0085567.1 MGP_LPJ_G0032744.1 mouse_genomes_project 7 113612788 113613863 - MGP_LPJ_P0085567 Olfr509 protein_coding protein_coding MGP_LPJ_T0005319.1 MGP_LPJ_G0004511.1 mouse_genomes_project 7 133345959 133348391 - 1700008J07Rik antisense antisense MGP_LPJ_T0002302.1 MGP_LPJ_G0002210.1 mouse_genomes_project 7 82654976 82656855 + TEC TEC MGP_LPJ_T0015741.1 MGP_LPJ_G0013832.1 mouse_genomes_project 7 43293743 43294279 + processed_pseudogene processed_pseudogene MGP_LPJ_T0083271.1 MGP_LPJ_G0032058.1 mouse_genomes_project 7 44820579 45062333 + MGP_LPJ_P0083271 protein_coding protein_coding MGP_LPJ_T0085392.1 MGP_LPJ_G0032663.1 mouse_genomes_project 7 110022875 110026065 + MGP_LPJ_P0085392 Gm5901 protein_coding protein_coding MGP_LPJ_T0083749.1 MGP_LPJ_G0032179.1 mouse_genomes_project 7 47857627 47893267 - MGP_LPJ_P0083749 Hps5 protein_coding nonsense_mediated_decay MGP_LPJ_T0083750.1 MGP_LPJ_G0032179.1 mouse_genomes_project 7 47857627 47893616 - MGP_LPJ_P0083750 Hps5 protein_coding protein_coding MGP_LPJ_T0083751.1 MGP_LPJ_G0032179.1 mouse_genomes_project 7 47857627 47893588 - MGP_LPJ_P0083751 Hps5 protein_coding protein_coding MGP_LPJ_T0083752.1 MGP_LPJ_G0032179.1 mouse_genomes_project 7 47857633 47893470 - MGP_LPJ_P0083752 Hps5 protein_coding protein_coding MGP_LPJ_T0083753.1 MGP_LPJ_G0032179.1 mouse_genomes_project 7 47858146 47893267 - Hps5 protein_coding retained_intron MGP_LPJ_T0083754.1 MGP_LPJ_G0032179.1 mouse_genomes_project 7 47858409 47866429 - Hps5 protein_coding processed_transcript MGP_LPJ_T0083755.1 MGP_LPJ_G0032179.1 mouse_genomes_project 7 47860106 47872562 - MGP_LPJ_P0083755 Hps5 protein_coding protein_coding MGP_LPJ_T0083756.1 MGP_LPJ_G0032179.1 mouse_genomes_project 7 47862339 47869623 - MGP_LPJ_P0083756 Hps5 protein_coding protein_coding MGP_LPJ_T0083757.1 MGP_LPJ_G0032179.1 mouse_genomes_project 7 47864397 47865875 - Hps5 protein_coding retained_intron MGP_LPJ_T0083758.1 MGP_LPJ_G0032179.1 mouse_genomes_project 7 47873491 47876103 - Hps5 protein_coding retained_intron MGP_LPJ_T0083759.1 MGP_LPJ_G0032179.1 mouse_genomes_project 7 47884159 47893653 - MGP_LPJ_P0083759 Hps5 protein_coding protein_coding MGP_LPJ_T0083760.1 MGP_LPJ_G0032179.1 mouse_genomes_project 7 47885791 47893292 - MGP_LPJ_P0083760 Hps5 protein_coding protein_coding MGP_LPJ_T0083761.1 MGP_LPJ_G0032179.1 mouse_genomes_project 7 47886576 47888603 - Hps5 protein_coding processed_transcript MGP_LPJ_T0098053.1 MGP_LPJ_G0036334.1 mouse_genomes_project 7 96901775 96903607 + pseudogene pseudogene MGP_LPJ_T0102301.1 MGP_LPJ_G0040338.1 mouse_genomes_project 7 9246083 9246475 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0083817.1 MGP_LPJ_G0032204.1 mouse_genomes_project 7 50484266 50542866 + Nav2 protein_coding processed_transcript MGP_LPJ_T0083818.1 MGP_LPJ_G0032204.1 mouse_genomes_project 7 50538132 50546886 + Nav2 protein_coding retained_intron MGP_LPJ_T0083819.1 MGP_LPJ_G0032204.1 mouse_genomes_project 7 50538156 51220272 + MGP_LPJ_P0083819 Nav2 protein_coding protein_coding MGP_LPJ_T0083820.1 MGP_LPJ_G0032204.1 mouse_genomes_project 7 50834119 51005553 + Nav2 protein_coding retained_intron MGP_LPJ_T0083821.1 MGP_LPJ_G0032204.1 mouse_genomes_project 7 50834119 51223424 + MGP_LPJ_P0083821 Nav2 protein_coding protein_coding MGP_LPJ_T0083822.1 MGP_LPJ_G0032204.1 mouse_genomes_project 7 50834773 51223427 + MGP_LPJ_P0083822 Nav2 protein_coding protein_coding MGP_LPJ_T0083823.1 MGP_LPJ_G0032204.1 mouse_genomes_project 7 50834774 51096295 + MGP_LPJ_P0083823 Nav2 protein_coding nonsense_mediated_decay MGP_LPJ_T0083824.1 MGP_LPJ_G0032204.1 mouse_genomes_project 7 50834897 51220272 + MGP_LPJ_P0083824 Nav2 protein_coding unknown_likely_coding MGP_LPJ_T0083825.1 MGP_LPJ_G0032204.1 mouse_genomes_project 7 50895589 51007316 + Nav2 protein_coding retained_intron MGP_LPJ_T0083826.1 MGP_LPJ_G0032204.1 mouse_genomes_project 7 50895703 51035289 + Nav2 protein_coding processed_transcript MGP_LPJ_T0083827.1 MGP_LPJ_G0032204.1 mouse_genomes_project 7 50895705 50897355 + Nav2 protein_coding retained_intron MGP_LPJ_T0083828.1 MGP_LPJ_G0032204.1 mouse_genomes_project 7 50959232 51054138 + Nav2 protein_coding retained_intron MGP_LPJ_T0083829.1 MGP_LPJ_G0032204.1 mouse_genomes_project 7 51050255 51064933 + Nav2 protein_coding processed_transcript MGP_LPJ_T0083830.1 MGP_LPJ_G0032204.1 mouse_genomes_project 7 51153286 51162091 + MGP_LPJ_P0083830 Nav2 protein_coding protein_coding MGP_LPJ_T0083831.1 MGP_LPJ_G0032204.1 mouse_genomes_project 7 51158986 51161825 + Nav2 protein_coding retained_intron MGP_LPJ_T0083832.1 MGP_LPJ_G0032204.1 mouse_genomes_project 7 51183556 51185022 + Nav2 protein_coding retained_intron MGP_LPJ_T0083833.1 MGP_LPJ_G0032204.1 mouse_genomes_project 7 51193659 51195243 + Nav2 protein_coding retained_intron MGP_LPJ_T0083834.1 MGP_LPJ_G0032204.1 mouse_genomes_project 7 51195865 51200641 + Nav2 protein_coding retained_intron MGP_LPJ_T0008940.1 MGP_LPJ_G0007219.1 mouse_genomes_project 7 76853462 76864979 - Gm45004 lincRNA lincRNA MGP_LPJ_T0082351.1 MGP_LPJ_G0031842.1 mouse_genomes_project 7 27406956 27413513 - MGP_LPJ_P0082351 Timm50 protein_coding protein_coding MGP_LPJ_T0082352.1 MGP_LPJ_G0031842.1 mouse_genomes_project 7 27407264 27408105 - Timm50 protein_coding retained_intron MGP_LPJ_T0082353.1 MGP_LPJ_G0031842.1 mouse_genomes_project 7 27407868 27409459 - Timm50 protein_coding retained_intron MGP_LPJ_T0082354.1 MGP_LPJ_G0031842.1 mouse_genomes_project 7 27410946 27413478 - Timm50 protein_coding retained_intron MGP_LPJ_T0082355.1 MGP_LPJ_G0031842.1 mouse_genomes_project 7 27411657 27413497 - Timm50 protein_coding retained_intron MGP_LPJ_T0082356.1 MGP_LPJ_G0031842.1 mouse_genomes_project 7 27412354 27413380 - Timm50 protein_coding processed_transcript MGP_LPJ_T0086864.1 MGP_LPJ_G0033008.1 mouse_genomes_project 7 136535677 136550507 - MGP_LPJ_P0086864 Nsmce4a protein_coding protein_coding MGP_LPJ_T0086865.1 MGP_LPJ_G0033008.1 mouse_genomes_project 7 136535687 136539133 - Nsmce4a protein_coding retained_intron MGP_LPJ_T0086866.1 MGP_LPJ_G0033008.1 mouse_genomes_project 7 136536941 136576235 - MGP_LPJ_P0086866 Nsmce4a protein_coding protein_coding MGP_LPJ_T0086867.1 MGP_LPJ_G0033008.1 mouse_genomes_project 7 136538708 136542667 - Nsmce4a protein_coding retained_intron MGP_LPJ_T0086868.1 MGP_LPJ_G0033008.1 mouse_genomes_project 7 136540142 136549080 - MGP_LPJ_P0086868 Nsmce4a protein_coding nonsense_mediated_decay MGP_LPJ_T0086869.1 MGP_LPJ_G0033008.1 mouse_genomes_project 7 136542867 136545949 - Nsmce4a protein_coding retained_intron MGP_LPJ_T0084508.1 MGP_LPJ_G0032333.1 mouse_genomes_project 7 84630968 84632768 - Rps17 protein_coding processed_transcript MGP_LPJ_T0084509.1 MGP_LPJ_G0032333.1 mouse_genomes_project 7 84630969 84635073 - MGP_LPJ_P0084509 Rps17 protein_coding protein_coding MGP_LPJ_T0084510.1 MGP_LPJ_G0032333.1 mouse_genomes_project 7 84630976 84635053 - Rps17 protein_coding retained_intron MGP_LPJ_T0084511.1 MGP_LPJ_G0032333.1 mouse_genomes_project 7 84631653 84635051 - Rps17 protein_coding retained_intron MGP_LPJ_T0084512.1 MGP_LPJ_G0032333.1 mouse_genomes_project 7 84634522 84635043 - Rps17 protein_coding processed_transcript MGP_LPJ_T0008958.1 MGP_LPJ_G0007229.1 mouse_genomes_project 7 82721136 82722480 - Gm45168 lincRNA lincRNA MGP_LPJ_T0008959.1 MGP_LPJ_G0007229.1 mouse_genomes_project 7 82721277 82722491 - Gm45168 lincRNA lincRNA MGP_LPJ_T0015666.1 MGP_LPJ_G0013757.1 mouse_genomes_project 7 11579351 11579565 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010864.1 MGP_LPJ_G0008982.1 mouse_genomes_project 7 23697649 23697715 - Mir7046 miRNA miRNA MGP_LPJ_T0081657.1 MGP_LPJ_G0031650.1 mouse_genomes_project 7 17172649 17173161 - Ccdc61 protein_coding retained_intron MGP_LPJ_T0081658.1 MGP_LPJ_G0031650.1 mouse_genomes_project 7 17172649 17192755 - MGP_LPJ_P0081658 Ccdc61 protein_coding protein_coding MGP_LPJ_T0081659.1 MGP_LPJ_G0031650.1 mouse_genomes_project 7 17172650 17174340 - MGP_LPJ_P0081659 Ccdc61 protein_coding nonsense_mediated_decay MGP_LPJ_T0081660.1 MGP_LPJ_G0031650.1 mouse_genomes_project 7 17172650 17192738 - MGP_LPJ_P0081660 Ccdc61 protein_coding nonsense_mediated_decay MGP_LPJ_T0081661.1 MGP_LPJ_G0031650.1 mouse_genomes_project 7 17172771 17175756 - MGP_LPJ_P0081661 Ccdc61 protein_coding protein_coding MGP_LPJ_T0081662.1 MGP_LPJ_G0031650.1 mouse_genomes_project 7 17173412 17174146 - Ccdc61 protein_coding retained_intron MGP_LPJ_T0081663.1 MGP_LPJ_G0031650.1 mouse_genomes_project 7 17181524 17192738 - MGP_LPJ_P0081663 Ccdc61 protein_coding protein_coding MGP_LPJ_T0081664.1 MGP_LPJ_G0031650.1 mouse_genomes_project 7 17182956 17192729 - MGP_LPJ_P0081664 Ccdc61 protein_coding protein_coding MGP_LPJ_T0008862.1 MGP_LPJ_G0007163.1 mouse_genomes_project 7 39549592 39558512 + Gm37494 lincRNA lincRNA MGP_LPJ_T0008863.1 MGP_LPJ_G0007163.1 mouse_genomes_project 7 39557679 39558910 + Gm37494 lincRNA lincRNA MGP_LPJ_T0008864.1 MGP_LPJ_G0007163.1 mouse_genomes_project 7 39557680 39588746 + Gm37494 lincRNA lincRNA MGP_LPJ_T0008865.1 MGP_LPJ_G0007163.1 mouse_genomes_project 7 39557704 39572426 + Gm37494 lincRNA lincRNA MGP_LPJ_T0005262.1 MGP_LPJ_G0004473.1 mouse_genomes_project 7 83088268 83091973 + Gm26646 antisense antisense MGP_LPJ_T0005263.1 MGP_LPJ_G0004473.1 mouse_genomes_project 7 83090300 83091973 + Gm26646 antisense antisense MGP_LPJ_T0010933.1 MGP_LPJ_G0009051.1 mouse_genomes_project 7 106211052 106211148 + Gm22655 miRNA miRNA MGP_LPJ_T0082700.1 MGP_LPJ_G0031927.1 mouse_genomes_project 7 29853583 29867231 - MGP_LPJ_P0082700 Proser3 protein_coding protein_coding MGP_LPJ_T0082701.1 MGP_LPJ_G0031927.1 mouse_genomes_project 7 29853895 29863653 - MGP_LPJ_P0082701 Proser3 protein_coding unknown_likely_coding MGP_LPJ_T0082702.1 MGP_LPJ_G0031927.1 mouse_genomes_project 7 29853895 29863653 - MGP_LPJ_P0082702 Proser3 protein_coding unknown_likely_coding MGP_LPJ_T0082703.1 MGP_LPJ_G0031927.1 mouse_genomes_project 7 29853966 29863653 - MGP_LPJ_P0082703 Proser3 protein_coding protein_coding MGP_LPJ_T0082704.1 MGP_LPJ_G0031927.1 mouse_genomes_project 7 29856893 29867255 - Proser3 protein_coding retained_intron MGP_LPJ_T0082705.1 MGP_LPJ_G0031927.1 mouse_genomes_project 7 29863040 29867251 - MGP_LPJ_P0082705 Proser3 protein_coding protein_coding MGP_LPJ_T0087469.1 MGP_LPJ_G0033166.1 mouse_genomes_project 7 148984303 148988670 - MGP_LPJ_P0087469 protein_coding protein_coding MGP_LPJ_T0084722.1 MGP_LPJ_G0032416.1 mouse_genomes_project 7 94149127 94155849 - MGP_LPJ_P0084722 Tmem126a protein_coding nonsense_mediated_decay MGP_LPJ_T0084723.1 MGP_LPJ_G0032416.1 mouse_genomes_project 7 94149132 94155870 - MGP_LPJ_P0084723 Tmem126a protein_coding protein_coding MGP_LPJ_T0084724.1 MGP_LPJ_G0032416.1 mouse_genomes_project 7 94153845 94155849 - Tmem126a protein_coding retained_intron MGP_LPJ_T0086084.1 MGP_LPJ_G0032873.1 mouse_genomes_project 7 127811408 128169607 + MGP_LPJ_P0086084 Prkcb protein_coding nonsense_mediated_decay MGP_LPJ_T0086085.1 MGP_LPJ_G0032873.1 mouse_genomes_project 7 127811954 128163862 + MGP_LPJ_P0086085 Prkcb protein_coding protein_coding MGP_LPJ_T0086086.1 MGP_LPJ_G0032873.1 mouse_genomes_project 7 127811966 128169610 + MGP_LPJ_P0086086 Prkcb protein_coding protein_coding MGP_LPJ_T0086087.1 MGP_LPJ_G0032873.1 mouse_genomes_project 7 127812685 127953390 + Prkcb protein_coding processed_transcript MGP_LPJ_T0086088.1 MGP_LPJ_G0032873.1 mouse_genomes_project 7 127944468 127988361 + Prkcb protein_coding processed_transcript MGP_LPJ_T0086089.1 MGP_LPJ_G0032873.1 mouse_genomes_project 7 128126607 128129386 + Prkcb protein_coding retained_intron MGP_LPJ_T0086090.1 MGP_LPJ_G0032873.1 mouse_genomes_project 7 128132622 128163285 + Prkcb protein_coding processed_transcript MGP_LPJ_T0086091.1 MGP_LPJ_G0032873.1 mouse_genomes_project 7 128168620 128169610 + Prkcb protein_coding retained_intron MGP_LPJ_T0086988.1 MGP_LPJ_G0033038.1 mouse_genomes_project 7 139947856 139954486 - Mmp21 protein_coding retained_intron MGP_LPJ_T0086989.1 MGP_LPJ_G0033038.1 mouse_genomes_project 7 139947856 139954486 - MGP_LPJ_P0086989 Mmp21 protein_coding protein_coding MGP_LPJ_T0086990.1 MGP_LPJ_G0033038.1 mouse_genomes_project 7 139947942 139954486 - MGP_LPJ_P0086990 Mmp21 protein_coding protein_coding MGP_LPJ_T0082937.1 MGP_LPJ_G0031967.1 mouse_genomes_project 7 33200601 33203077 - MGP_LPJ_P0082937 Scgb2b24 protein_coding protein_coding MGP_LPJ_T0102315.1 MGP_LPJ_G0040352.1 mouse_genomes_project 7 10876357 10905409 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0082753.1 MGP_LPJ_G0031933.1 mouse_genomes_project 7 29883615 29903553 - MGP_LPJ_P0082753 Kmt2b protein_coding protein_coding MGP_LPJ_T0082754.1 MGP_LPJ_G0031933.1 mouse_genomes_project 7 29883615 29903544 - MGP_LPJ_P0082754 Kmt2b protein_coding protein_coding MGP_LPJ_T0082755.1 MGP_LPJ_G0031933.1 mouse_genomes_project 7 29883617 29900167 - MGP_LPJ_P0082755 Kmt2b protein_coding protein_coding MGP_LPJ_T0082756.1 MGP_LPJ_G0031933.1 mouse_genomes_project 7 29884510 29885421 - Kmt2b protein_coding retained_intron MGP_LPJ_T0082757.1 MGP_LPJ_G0031933.1 mouse_genomes_project 7 29887917 29888923 - Kmt2b protein_coding retained_intron MGP_LPJ_T0082758.1 MGP_LPJ_G0031933.1 mouse_genomes_project 7 29890321 29891913 - Kmt2b protein_coding processed_transcript MGP_LPJ_T0082759.1 MGP_LPJ_G0031933.1 mouse_genomes_project 7 29891778 29893770 - Kmt2b protein_coding processed_transcript MGP_LPJ_T0082760.1 MGP_LPJ_G0031933.1 mouse_genomes_project 7 29899091 29899901 - Kmt2b protein_coding processed_transcript MGP_LPJ_T0084823.1 MGP_LPJ_G0032437.1 mouse_genomes_project 7 101725035 101747231 + MGP_LPJ_P0084823 Clns1a protein_coding protein_coding MGP_LPJ_T0084824.1 MGP_LPJ_G0032437.1 mouse_genomes_project 7 101725096 101741101 + Clns1a protein_coding retained_intron MGP_LPJ_T0084825.1 MGP_LPJ_G0032437.1 mouse_genomes_project 7 101746145 101749149 + Clns1a protein_coding retained_intron MGP_LPJ_T0087130.1 MGP_LPJ_G0033075.1 mouse_genomes_project 7 146656480 146660695 + MGP_LPJ_P0087130 Zfp511 protein_coding protein_coding MGP_LPJ_T0100962.1 MGP_LPJ_G0039225.1 mouse_genomes_project 7 61287421 61555875 - snoRNA snoRNA MGP_LPJ_T0008822.1 MGP_LPJ_G0007126.1 mouse_genomes_project 7 17705333 17715732 - Gm26852 lincRNA lincRNA MGP_LPJ_T0082320.1 MGP_LPJ_G0031829.1 mouse_genomes_project 7 26985728 27010623 - MGP_LPJ_P0082320 protein_coding protein_coding MGP_LPJ_T0084797.1 MGP_LPJ_G0032434.1 mouse_genomes_project 7 101505597 101567861 + MGP_LPJ_P0084797 Ints4 protein_coding protein_coding MGP_LPJ_T0084798.1 MGP_LPJ_G0032434.1 mouse_genomes_project 7 101505644 101541058 + Ints4 protein_coding retained_intron MGP_LPJ_T0084799.1 MGP_LPJ_G0032434.1 mouse_genomes_project 7 101505654 101521839 + Ints4 protein_coding retained_intron MGP_LPJ_T0084800.1 MGP_LPJ_G0032434.1 mouse_genomes_project 7 101527741 101534690 + MGP_LPJ_P0084800 Ints4 protein_coding nonsense_mediated_decay MGP_LPJ_T0084801.1 MGP_LPJ_G0032434.1 mouse_genomes_project 7 101556895 101561716 + Ints4 protein_coding retained_intron MGP_LPJ_T0084802.1 MGP_LPJ_G0032434.1 mouse_genomes_project 7 101561550 101567729 + Ints4 protein_coding retained_intron MGP_LPJ_T0084803.1 MGP_LPJ_G0032434.1 mouse_genomes_project 7 101561782 101567862 + Ints4 protein_coding retained_intron MGP_LPJ_T0084901.1 MGP_LPJ_G0032453.1 mouse_genomes_project 7 103248551 103285177 - MGP_LPJ_P0084901 Dgat2 protein_coding protein_coding MGP_LPJ_T0102431.1 MGP_LPJ_G0040467.1 mouse_genomes_project 7 89674396 89675336 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002301.1 MGP_LPJ_G0002209.1 mouse_genomes_project 7 82651022 82651359 + TEC TEC MGP_LPJ_T0086685.1 MGP_LPJ_G0032979.1 mouse_genomes_project 7 133747492 133750047 - MGP_LPJ_P0086685 Vkorc1 protein_coding protein_coding MGP_LPJ_T0086686.1 MGP_LPJ_G0032979.1 mouse_genomes_project 7 133747494 133749681 - MGP_LPJ_P0086686 Vkorc1 protein_coding protein_coding MGP_LPJ_T0086687.1 MGP_LPJ_G0032979.1 mouse_genomes_project 7 133747667 133749739 - MGP_LPJ_P0086687 Vkorc1 protein_coding protein_coding MGP_LPJ_T0085936.1 MGP_LPJ_G0032832.1 mouse_genomes_project 7 125070454 125098138 + MGP_LPJ_P0085936 Acsm4 protein_coding protein_coding MGP_LPJ_T0008858.1 MGP_LPJ_G0007159.1 mouse_genomes_project 7 37141927 37147888 + Gm28077 lincRNA lincRNA MGP_LPJ_T0008867.1 MGP_LPJ_G0007165.1 mouse_genomes_project 7 39914193 39924979 - lincRNA lincRNA MGP_LPJ_T0008868.1 MGP_LPJ_G0007165.1 mouse_genomes_project 7 39914197 39924996 - lincRNA lincRNA MGP_LPJ_T0008869.1 MGP_LPJ_G0007165.1 mouse_genomes_project 7 39914198 39925017 - lincRNA lincRNA MGP_LPJ_T0008870.1 MGP_LPJ_G0007165.1 mouse_genomes_project 7 39914251 39924980 - lincRNA lincRNA MGP_LPJ_T0102388.1 MGP_LPJ_G0040424.1 mouse_genomes_project 7 48624787 48726014 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0102440.1 MGP_LPJ_G0040476.1 mouse_genomes_project 7 107348272 107349157 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008908.1 MGP_LPJ_G0007194.1 mouse_genomes_project 7 70791658 70887078 + lincRNA lincRNA MGP_LPJ_T0008909.1 MGP_LPJ_G0007194.1 mouse_genomes_project 7 70793801 70877648 + lincRNA lincRNA MGP_LPJ_T0008910.1 MGP_LPJ_G0007194.1 mouse_genomes_project 7 70820533 70887076 + lincRNA lincRNA MGP_LPJ_T0008911.1 MGP_LPJ_G0007194.1 mouse_genomes_project 7 70855123 70877727 + lincRNA lincRNA MGP_LPJ_T0085213.1 MGP_LPJ_G0032522.1 mouse_genomes_project 7 106933721 106941254 - MGP_LPJ_P0085213 Trim21 protein_coding protein_coding MGP_LPJ_T0085214.1 MGP_LPJ_G0032522.1 mouse_genomes_project 7 106933721 106941254 - MGP_LPJ_P0085214 Trim21 protein_coding protein_coding MGP_LPJ_T0082635.1 MGP_LPJ_G0031912.1 mouse_genomes_project 7 29584778 29594987 + MGP_LPJ_P0082635 protein_coding protein_coding MGP_LPJ_T0085447.1 MGP_LPJ_G0032673.1 mouse_genomes_project 7 110307222 110325585 + Dnhd1 protein_coding processed_transcript MGP_LPJ_T0085453.1 MGP_LPJ_G0032673.1 mouse_genomes_project 7 110307239 110354295 + Dnhd1 protein_coding processed_transcript MGP_LPJ_T0085457.1 MGP_LPJ_G0032673.1 mouse_genomes_project 7 110317448 110394271 + MGP_LPJ_P0085457 Dnhd1 protein_coding protein_coding MGP_LPJ_T0085458.1 MGP_LPJ_G0032673.1 mouse_genomes_project 7 110317829 110394239 + MGP_LPJ_P0085458 Dnhd1 protein_coding unknown_likely_coding MGP_LPJ_T0085459.1 MGP_LPJ_G0032673.1 mouse_genomes_project 7 110343130 110347355 + Dnhd1 protein_coding retained_intron MGP_LPJ_T0085460.1 MGP_LPJ_G0032673.1 mouse_genomes_project 7 110347178 110354288 + MGP_LPJ_P0085460 Dnhd1 protein_coding protein_coding MGP_LPJ_T0015820.1 MGP_LPJ_G0013911.1 mouse_genomes_project 7 101962273 101962664 + processed_pseudogene processed_pseudogene MGP_LPJ_T0086991.1 MGP_LPJ_G0033039.1 mouse_genomes_project 7 139960965 139984933 - Uros protein_coding retained_intron MGP_LPJ_T0086992.1 MGP_LPJ_G0033039.1 mouse_genomes_project 7 139961078 139984797 - MGP_LPJ_P0086992 Uros protein_coding protein_coding MGP_LPJ_T0086993.1 MGP_LPJ_G0033039.1 mouse_genomes_project 7 139961078 139984908 - MGP_LPJ_P0086993 Uros protein_coding protein_coding MGP_LPJ_T0086994.1 MGP_LPJ_G0033039.1 mouse_genomes_project 7 139961087 139985120 - MGP_LPJ_P0086994 Uros protein_coding protein_coding MGP_LPJ_T0086995.1 MGP_LPJ_G0033039.1 mouse_genomes_project 7 139961683 139973825 - Uros protein_coding processed_transcript MGP_LPJ_T0086996.1 MGP_LPJ_G0033039.1 mouse_genomes_project 7 139966856 139984898 - MGP_LPJ_P0086996 Uros protein_coding protein_coding MGP_LPJ_T0086997.1 MGP_LPJ_G0033039.1 mouse_genomes_project 7 139977587 139978365 - MGP_LPJ_P0086997 Uros protein_coding protein_coding MGP_LPJ_T0086998.1 MGP_LPJ_G0033039.1 mouse_genomes_project 7 139977641 139984896 - MGP_LPJ_P0086998 Uros protein_coding protein_coding MGP_LPJ_T0086999.1 MGP_LPJ_G0033039.1 mouse_genomes_project 7 139977643 139985911 - MGP_LPJ_P0086999 Uros protein_coding protein_coding MGP_LPJ_T0009078.1 MGP_LPJ_G0007301.1 mouse_genomes_project 7 151804683 151807585 - Gm26793 lincRNA lincRNA MGP_LPJ_T0087661.1 MGP_LPJ_G0033203.1 mouse_genomes_project 7 151321487 151358889 - MGP_LPJ_P0087661 Cttn protein_coding protein_coding MGP_LPJ_T0087662.1 MGP_LPJ_G0033203.1 mouse_genomes_project 7 151321489 151359153 - MGP_LPJ_P0087662 Cttn protein_coding protein_coding MGP_LPJ_T0087663.1 MGP_LPJ_G0033203.1 mouse_genomes_project 7 151323215 151324672 - Cttn protein_coding retained_intron MGP_LPJ_T0087664.1 MGP_LPJ_G0033203.1 mouse_genomes_project 7 151325129 151336970 - Cttn protein_coding retained_intron MGP_LPJ_T0087665.1 MGP_LPJ_G0033203.1 mouse_genomes_project 7 151326362 151333095 - Cttn protein_coding processed_transcript MGP_LPJ_T0087666.1 MGP_LPJ_G0033203.1 mouse_genomes_project 7 151332992 151339783 - Cttn protein_coding processed_transcript MGP_LPJ_T0087667.1 MGP_LPJ_G0033203.1 mouse_genomes_project 7 151343659 151347969 - Cttn protein_coding processed_transcript MGP_LPJ_T0083962.1 MGP_LPJ_G0032234.1 mouse_genomes_project 7 64702280 64704827 - MGP_LPJ_P0083962 Mkrn3 protein_coding protein_coding MGP_LPJ_T0085278.1 MGP_LPJ_G0032581.1 mouse_genomes_project 7 108164417 108165371 - MGP_LPJ_P0085278 Olfr623 protein_coding protein_coding MGP_LPJ_T0002317.1 MGP_LPJ_G0002225.1 mouse_genomes_project 7 126727943 126728575 - TEC TEC MGP_LPJ_T0015724.1 MGP_LPJ_G0013815.1 mouse_genomes_project 7 38557854 38558079 + processed_pseudogene processed_pseudogene MGP_LPJ_T0087283.1 MGP_LPJ_G0033133.1 mouse_genomes_project 7 147888340 147891139 + MGP_LPJ_P0087283 Rassf7 protein_coding protein_coding MGP_LPJ_T0087284.1 MGP_LPJ_G0033133.1 mouse_genomes_project 7 147888355 147890481 + Rassf7 protein_coding processed_transcript MGP_LPJ_T0087285.1 MGP_LPJ_G0033133.1 mouse_genomes_project 7 147888379 147889994 + Rassf7 protein_coding processed_transcript MGP_LPJ_T0087286.1 MGP_LPJ_G0033133.1 mouse_genomes_project 7 147888458 147889959 + MGP_LPJ_P0087286 Rassf7 protein_coding protein_coding MGP_LPJ_T0087287.1 MGP_LPJ_G0033133.1 mouse_genomes_project 7 147888683 147889953 + MGP_LPJ_P0087287 Rassf7 protein_coding protein_coding MGP_LPJ_T0087288.1 MGP_LPJ_G0033133.1 mouse_genomes_project 7 147889115 147890086 + MGP_LPJ_P0087288 Rassf7 protein_coding protein_coding MGP_LPJ_T0087289.1 MGP_LPJ_G0033133.1 mouse_genomes_project 7 147889180 147890194 + MGP_LPJ_P0087289 Rassf7 protein_coding protein_coding MGP_LPJ_T0015868.1 MGP_LPJ_G0013959.1 mouse_genomes_project 7 132949603 132950541 + processed_pseudogene processed_pseudogene MGP_LPJ_T0018333.1 MGP_LPJ_G0015593.1 mouse_genomes_project 7 76329534 76349318 - 1810026B05Rik processed_transcript lincRNA MGP_LPJ_T0018334.1 MGP_LPJ_G0015593.1 mouse_genomes_project 7 76334367 76349167 - 1810026B05Rik processed_transcript lincRNA MGP_LPJ_T0018335.1 MGP_LPJ_G0015593.1 mouse_genomes_project 7 76334368 76349070 - 1810026B05Rik processed_transcript lincRNA MGP_LPJ_T0018336.1 MGP_LPJ_G0015593.1 mouse_genomes_project 7 76334373 76337196 - 1810026B05Rik processed_transcript retained_intron MGP_LPJ_T0018337.1 MGP_LPJ_G0015593.1 mouse_genomes_project 7 76334574 76346843 - 1810026B05Rik processed_transcript lincRNA MGP_LPJ_T0018338.1 MGP_LPJ_G0015593.1 mouse_genomes_project 7 76334595 76348896 - 1810026B05Rik processed_transcript lincRNA MGP_LPJ_T0018339.1 MGP_LPJ_G0015593.1 mouse_genomes_project 7 76334637 76349171 - 1810026B05Rik processed_transcript lincRNA MGP_LPJ_T0018340.1 MGP_LPJ_G0015593.1 mouse_genomes_project 7 76346070 76349309 - 1810026B05Rik processed_transcript retained_intron MGP_LPJ_T0002310.1 MGP_LPJ_G0002218.1 mouse_genomes_project 7 84828005 84830218 - TEC TEC MGP_LPJ_T0011692.1 MGP_LPJ_G0009810.1 mouse_genomes_project 7 10891279 10891547 + Gm23499 misc_RNA misc_RNA MGP_LPJ_T0087413.1 MGP_LPJ_G0033151.1 mouse_genomes_project 7 148157263 148160625 - MGP_LPJ_P0087413 Polr2l protein_coding protein_coding MGP_LPJ_T0102329.1 MGP_LPJ_G0040366.1 mouse_genomes_project 7 12538169 12538417 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0081639.1 MGP_LPJ_G0031639.1 mouse_genomes_project 7 16332076 16360933 + MGP_LPJ_P0081639 Mill1 protein_coding protein_coding MGP_LPJ_T0085914.1 MGP_LPJ_G0032823.1 mouse_genomes_project 7 124191958 124242935 + Iqck protein_coding retained_intron MGP_LPJ_T0085915.1 MGP_LPJ_G0032823.1 mouse_genomes_project 7 124191973 124322692 + MGP_LPJ_P0085915 Iqck protein_coding protein_coding MGP_LPJ_T0085916.1 MGP_LPJ_G0032823.1 mouse_genomes_project 7 124191973 124323224 + MGP_LPJ_P0085916 Iqck protein_coding protein_coding MGP_LPJ_T0085917.1 MGP_LPJ_G0032823.1 mouse_genomes_project 7 124191973 124322860 + MGP_LPJ_P0085917 Iqck protein_coding nonsense_mediated_decay MGP_LPJ_T0085918.1 MGP_LPJ_G0032823.1 mouse_genomes_project 7 124278985 124322338 + Iqck protein_coding processed_transcript MGP_LPJ_T0084738.1 MGP_LPJ_G0032419.1 mouse_genomes_project 7 96362128 96365700 + Ccdc90b protein_coding processed_transcript MGP_LPJ_T0084739.1 MGP_LPJ_G0032419.1 mouse_genomes_project 7 96362128 96385329 + MGP_LPJ_P0084739 Ccdc90b protein_coding protein_coding MGP_LPJ_T0084740.1 MGP_LPJ_G0032419.1 mouse_genomes_project 7 96362128 96385329 + MGP_LPJ_P0084740 Ccdc90b protein_coding protein_coding MGP_LPJ_T0085580.1 MGP_LPJ_G0032754.1 mouse_genomes_project 7 113973361 113992313 + MGP_LPJ_P0085580 Tub protein_coding protein_coding MGP_LPJ_T0085581.1 MGP_LPJ_G0032754.1 mouse_genomes_project 7 113989209 113991416 + Tub protein_coding retained_intron MGP_LPJ_T0083195.1 MGP_LPJ_G0032028.1 mouse_genomes_project 7 44196717 44210215 + MGP_LPJ_P0083195 Etfb protein_coding protein_coding MGP_LPJ_T0083196.1 MGP_LPJ_G0032028.1 mouse_genomes_project 7 44196753 44210079 + MGP_LPJ_P0083196 Etfb protein_coding protein_coding MGP_LPJ_T0083198.1 MGP_LPJ_G0032028.1 mouse_genomes_project 7 44196764 44208988 + MGP_LPJ_P0083198 Etfb protein_coding protein_coding MGP_LPJ_T0083200.1 MGP_LPJ_G0032028.1 mouse_genomes_project 7 44196784 44210196 + MGP_LPJ_P0083200 Etfb protein_coding protein_coding MGP_LPJ_T0083201.1 MGP_LPJ_G0032028.1 mouse_genomes_project 7 44205303 44210196 + MGP_LPJ_P0083201 Etfb protein_coding protein_coding MGP_LPJ_T0083202.1 MGP_LPJ_G0032028.1 mouse_genomes_project 7 44208915 44210195 + Etfb protein_coding processed_transcript MGP_LPJ_T0083203.1 MGP_LPJ_G0032028.1 mouse_genomes_project 7 44209450 44210198 + Etfb protein_coding processed_transcript MGP_LPJ_T0008947.1 MGP_LPJ_G0007224.1 mouse_genomes_project 7 81899718 81902097 + 5330411O13Rik lincRNA lincRNA MGP_LPJ_T0085714.1 MGP_LPJ_G0032786.1 mouse_genomes_project 7 117442376 117493221 + MGP_LPJ_P0085714 Micalcl protein_coding protein_coding MGP_LPJ_T0085715.1 MGP_LPJ_G0032786.1 mouse_genomes_project 7 117454579 117475601 + MGP_LPJ_P0085715 Micalcl protein_coding protein_coding MGP_LPJ_T0085716.1 MGP_LPJ_G0032786.1 mouse_genomes_project 7 117455102 117493336 + MGP_LPJ_P0085716 Micalcl protein_coding protein_coding MGP_LPJ_T0085717.1 MGP_LPJ_G0032786.1 mouse_genomes_project 7 117461385 117493336 + MGP_LPJ_P0085717 Micalcl protein_coding protein_coding MGP_LPJ_T0085718.1 MGP_LPJ_G0032786.1 mouse_genomes_project 7 117487356 117493287 + Micalcl protein_coding retained_intron MGP_LPJ_T0102427.1 MGP_LPJ_G0040463.1 mouse_genomes_project 7 89511121 89512724 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0102386.1 MGP_LPJ_G0040422.1 mouse_genomes_project 7 44950800 44950924 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0087156.1 MGP_LPJ_G0033082.1 mouse_genomes_project 7 146766553 146782664 + MGP_LPJ_P0087156 Mtg1 protein_coding protein_coding MGP_LPJ_T0087157.1 MGP_LPJ_G0033082.1 mouse_genomes_project 7 146766638 146771148 + Mtg1 protein_coding retained_intron MGP_LPJ_T0087158.1 MGP_LPJ_G0033082.1 mouse_genomes_project 7 146766652 146779351 + Mtg1 protein_coding retained_intron MGP_LPJ_T0087159.1 MGP_LPJ_G0033082.1 mouse_genomes_project 7 146766952 146767386 + Mtg1 protein_coding processed_transcript MGP_LPJ_T0087160.1 MGP_LPJ_G0033082.1 mouse_genomes_project 7 146769230 146779039 + Mtg1 protein_coding retained_intron MGP_LPJ_T0087161.1 MGP_LPJ_G0033082.1 mouse_genomes_project 7 146780836 146782325 + Mtg1 protein_coding processed_transcript MGP_LPJ_T0083303.1 MGP_LPJ_G0032067.1 mouse_genomes_project 7 45225661 45242184 + MGP_LPJ_P0083303 Syt3 protein_coding protein_coding MGP_LPJ_T0083304.1 MGP_LPJ_G0032067.1 mouse_genomes_project 7 45225686 45227005 + Syt3 protein_coding processed_transcript MGP_LPJ_T0083305.1 MGP_LPJ_G0032067.1 mouse_genomes_project 7 45225713 45242342 + MGP_LPJ_P0083305 Syt3 protein_coding protein_coding MGP_LPJ_T0083306.1 MGP_LPJ_G0032067.1 mouse_genomes_project 7 45226163 45227607 + MGP_LPJ_P0083306 Syt3 protein_coding protein_coding MGP_LPJ_T0083307.1 MGP_LPJ_G0032067.1 mouse_genomes_project 7 45226163 45227677 + MGP_LPJ_P0083307 Syt3 protein_coding protein_coding MGP_LPJ_T0083308.1 MGP_LPJ_G0032067.1 mouse_genomes_project 7 45226427 45241918 + MGP_LPJ_P0083308 Syt3 protein_coding protein_coding MGP_LPJ_T0008941.1 MGP_LPJ_G0007220.1 mouse_genomes_project 7 77653263 77658525 + Gm30459 lincRNA lincRNA MGP_LPJ_T0081313.1 MGP_LPJ_G0031519.1 mouse_genomes_project 7 3962090 4200748 + MGP_LPJ_P0081313 Usp29 protein_coding protein_coding MGP_LPJ_T0081314.1 MGP_LPJ_G0031519.1 mouse_genomes_project 7 3962248 4195291 + MGP_LPJ_P0081314 Usp29 protein_coding protein_coding MGP_LPJ_T0081315.1 MGP_LPJ_G0031519.1 mouse_genomes_project 7 4180884 4198344 + MGP_LPJ_P0081315 Usp29 protein_coding protein_coding MGP_LPJ_T0081316.1 MGP_LPJ_G0031519.1 mouse_genomes_project 7 4194696 4197306 + MGP_LPJ_P0081316 Usp29 protein_coding protein_coding MGP_LPJ_T0011709.1 MGP_LPJ_G0009827.1 mouse_genomes_project 7 132830269 132830515 + Gm25333 misc_RNA misc_RNA MGP_LPJ_T0010939.1 MGP_LPJ_G0009057.1 mouse_genomes_project 7 123056354 123056459 + Gm24063 miRNA miRNA MGP_LPJ_T0083524.1 MGP_LPJ_G0032120.1 mouse_genomes_project 7 46249271 46286257 - MGP_LPJ_P0083524 Trpm4 protein_coding protein_coding MGP_LPJ_T0083533.1 MGP_LPJ_G0032123.1 mouse_genomes_project 7 46321956 46324650 - MGP_LPJ_P0083533 Lin7b protein_coding protein_coding MGP_LPJ_T0083534.1 MGP_LPJ_G0032123.1 mouse_genomes_project 7 46321958 46322668 - Lin7b protein_coding retained_intron MGP_LPJ_T0083535.1 MGP_LPJ_G0032123.1 mouse_genomes_project 7 46323275 46324382 - Lin7b protein_coding retained_intron MGP_LPJ_T0083536.1 MGP_LPJ_G0032123.1 mouse_genomes_project 7 46323329 46324252 - Lin7b protein_coding retained_intron MGP_LPJ_T0083537.1 MGP_LPJ_G0032123.1 mouse_genomes_project 7 46323628 46324413 - Lin7b protein_coding retained_intron MGP_LPJ_T0015665.1 MGP_LPJ_G0013756.1 mouse_genomes_project 7 11317730 11319320 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002231.1 MGP_LPJ_G0002140.1 mouse_genomes_project 7 34032851 34036731 + TEC TEC MGP_LPJ_T0102428.1 MGP_LPJ_G0040464.1 mouse_genomes_project 7 89543495 89544333 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002248.1 MGP_LPJ_G0002157.1 mouse_genomes_project 7 44455573 44456026 + TEC TEC MGP_LPJ_T0085667.1 MGP_LPJ_G0032777.1 mouse_genomes_project 7 115825075 115826243 - Rnf141 protein_coding retained_intron MGP_LPJ_T0085668.1 MGP_LPJ_G0032777.1 mouse_genomes_project 7 115825257 115845969 - MGP_LPJ_P0085668 Rnf141 protein_coding nonsense_mediated_decay MGP_LPJ_T0085669.1 MGP_LPJ_G0032777.1 mouse_genomes_project 7 115838180 115868796 - MGP_LPJ_P0085669 Rnf141 protein_coding protein_coding MGP_LPJ_T0085670.1 MGP_LPJ_G0032777.1 mouse_genomes_project 7 115840233 115868736 - MGP_LPJ_P0085670 Rnf141 protein_coding protein_coding MGP_LPJ_T0085671.1 MGP_LPJ_G0032777.1 mouse_genomes_project 7 115841098 115845915 - MGP_LPJ_P0085671 Rnf141 protein_coding protein_coding MGP_LPJ_T0085672.1 MGP_LPJ_G0032777.1 mouse_genomes_project 7 115841234 115846240 - Rnf141 protein_coding retained_intron MGP_LPJ_T0085673.1 MGP_LPJ_G0032777.1 mouse_genomes_project 7 115855065 115868788 - Rnf141 protein_coding processed_transcript MGP_LPJ_T0085674.1 MGP_LPJ_G0032777.1 mouse_genomes_project 7 115858172 115868543 - MGP_LPJ_P0085674 Rnf141 protein_coding protein_coding MGP_LPJ_T0085231.1 MGP_LPJ_G0032538.1 mouse_genomes_project 7 107247422 107250472 - MGP_LPJ_P0085231 Olfr566 protein_coding protein_coding MGP_LPJ_T0081277.1 MGP_LPJ_G0031502.1 mouse_genomes_project 7 3425163 3454513 + MGP_LPJ_P0081277 Gm6792 protein_coding protein_coding MGP_LPJ_T0081278.1 MGP_LPJ_G0031502.1 mouse_genomes_project 7 3430931 3454720 + Gm6792 protein_coding processed_transcript MGP_LPJ_T0081279.1 MGP_LPJ_G0031502.1 mouse_genomes_project 7 3433191 3454513 + MGP_LPJ_P0081279 Gm6792 protein_coding protein_coding MGP_LPJ_T0102415.1 MGP_LPJ_G0040451.1 mouse_genomes_project 7 88653484 88654345 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0082062.1 MGP_LPJ_G0031763.1 mouse_genomes_project 7 24056193 24058605 - MGP_LPJ_P0082062 Pafah1b3 protein_coding protein_coding MGP_LPJ_T0082063.1 MGP_LPJ_G0031763.1 mouse_genomes_project 7 24056201 24057855 - Pafah1b3 protein_coding retained_intron MGP_LPJ_T0082064.1 MGP_LPJ_G0031763.1 mouse_genomes_project 7 24056511 24059035 - MGP_LPJ_P0082064 Pafah1b3 protein_coding protein_coding MGP_LPJ_T0082065.1 MGP_LPJ_G0031763.1 mouse_genomes_project 7 24057118 24059090 - MGP_LPJ_P0082065 Pafah1b3 protein_coding protein_coding MGP_LPJ_T0082066.1 MGP_LPJ_G0031763.1 mouse_genomes_project 7 24057772 24059074 - Pafah1b3 protein_coding retained_intron MGP_LPJ_T0082067.1 MGP_LPJ_G0031763.1 mouse_genomes_project 7 24058026 24059087 - Pafah1b3 protein_coding processed_transcript MGP_LPJ_T0008859.1 MGP_LPJ_G0007160.1 mouse_genomes_project 7 37161723 37164925 - lincRNA lincRNA MGP_LPJ_T0015743.1 MGP_LPJ_G0013834.1 mouse_genomes_project 7 43563721 43564205 + processed_pseudogene processed_pseudogene MGP_LPJ_T0087312.1 MGP_LPJ_G0033136.1 mouse_genomes_project 7 147947364 147955066 - MGP_LPJ_P0087312 Cdhr5 protein_coding protein_coding MGP_LPJ_T0087313.1 MGP_LPJ_G0033136.1 mouse_genomes_project 7 147947364 147955066 - MGP_LPJ_P0087313 Cdhr5 protein_coding protein_coding MGP_LPJ_T0005230.1 MGP_LPJ_G0004451.1 mouse_genomes_project 7 38085702 38085918 - D530033B14Rik antisense antisense MGP_LPJ_T0005231.1 MGP_LPJ_G0004451.1 mouse_genomes_project 7 38085898 38099410 - D530033B14Rik antisense antisense MGP_LPJ_T0081351.1 MGP_LPJ_G0031547.1 mouse_genomes_project 7 9914042 9935076 + MGP_LPJ_P0081351 Zfp606 protein_coding protein_coding MGP_LPJ_T0081352.1 MGP_LPJ_G0031547.1 mouse_genomes_project 7 9914054 9922742 + Zfp606 protein_coding retained_intron MGP_LPJ_T0081353.1 MGP_LPJ_G0031547.1 mouse_genomes_project 7 9914112 9934399 + MGP_LPJ_P0081353 Zfp606 protein_coding protein_coding MGP_LPJ_T0081354.1 MGP_LPJ_G0031547.1 mouse_genomes_project 7 9928353 9934390 + Zfp606 protein_coding retained_intron MGP_LPJ_T0010875.1 MGP_LPJ_G0008993.1 mouse_genomes_project 7 29031759 29031842 + Mir1964 miRNA miRNA MGP_LPJ_T0009015.1 MGP_LPJ_G0007261.1 mouse_genomes_project 7 121782820 121784919 + Gm45151 lincRNA lincRNA MGP_LPJ_T0082671.1 MGP_LPJ_G0031916.1 mouse_genomes_project 7 29629111 29631594 - MGP_LPJ_P0082671 Sdhaf1 protein_coding protein_coding MGP_LPJ_T0082101.1 MGP_LPJ_G0031775.1 mouse_genomes_project 7 24413714 24415512 - MGP_LPJ_P0082101 Bckdha protein_coding protein_coding MGP_LPJ_T0082102.1 MGP_LPJ_G0031775.1 mouse_genomes_project 7 24413714 24444629 - MGP_LPJ_P0082102 Bckdha protein_coding protein_coding MGP_LPJ_T0081224.1 MGP_LPJ_G0031477.1 mouse_genomes_project 7 2023450 2029318 - MGP_LPJ_P0081224 Sbk3 protein_coding protein_coding MGP_LPJ_T0081225.1 MGP_LPJ_G0031477.1 mouse_genomes_project 7 2025717 2029525 - MGP_LPJ_P0081225 Sbk3 protein_coding protein_coding MGP_LPJ_T0099749.1 MGP_LPJ_G0038012.1 mouse_genomes_project 7 147845705 147845801 - Gm22019 snRNA snRNA MGP_LPJ_T0015642.1 MGP_LPJ_G0013733.1 mouse_genomes_project 7 1198624 1199497 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102420.1 MGP_LPJ_G0040456.1 mouse_genomes_project 7 89034736 89035611 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0082577.1 MGP_LPJ_G0031895.1 mouse_genomes_project 7 29205551 29218372 - MGP_LPJ_P0082577 protein_coding protein_coding MGP_LPJ_T0082578.1 MGP_LPJ_G0031895.1 mouse_genomes_project 7 29206246 29231911 - MGP_LPJ_P0082578 protein_coding protein_coding MGP_LPJ_T0082579.1 MGP_LPJ_G0031895.1 mouse_genomes_project 7 29207665 29223827 - MGP_LPJ_P0082579 protein_coding unknown_likely_coding MGP_LPJ_T0082580.1 MGP_LPJ_G0031895.1 mouse_genomes_project 7 29212470 29231913 - protein_coding processed_transcript MGP_LPJ_T0085424.1 MGP_LPJ_G0032670.1 mouse_genomes_project 7 110267070 110299187 - MGP_LPJ_P0085424 Trim3 protein_coding protein_coding MGP_LPJ_T0085425.1 MGP_LPJ_G0032670.1 mouse_genomes_project 7 110273105 110299239 - MGP_LPJ_P0085425 Trim3 protein_coding protein_coding MGP_LPJ_T0085426.1 MGP_LPJ_G0032670.1 mouse_genomes_project 7 110273283 110299216 - MGP_LPJ_P0085426 Trim3 protein_coding protein_coding MGP_LPJ_T0085427.1 MGP_LPJ_G0032670.1 mouse_genomes_project 7 110273774 110274492 - Trim3 protein_coding retained_intron MGP_LPJ_T0085428.1 MGP_LPJ_G0032670.1 mouse_genomes_project 7 110274943 110276041 - Trim3 protein_coding retained_intron MGP_LPJ_T0085429.1 MGP_LPJ_G0032670.1 mouse_genomes_project 7 110279666 110280662 - Trim3 protein_coding retained_intron MGP_LPJ_T0085430.1 MGP_LPJ_G0032670.1 mouse_genomes_project 7 110281419 110299204 - MGP_LPJ_P0085430 Trim3 protein_coding protein_coding MGP_LPJ_T0085431.1 MGP_LPJ_G0032670.1 mouse_genomes_project 7 110281741 110299250 - Trim3 protein_coding processed_transcript MGP_LPJ_T0085432.1 MGP_LPJ_G0032670.1 mouse_genomes_project 7 110282018 110299164 - MGP_LPJ_P0085432 Trim3 protein_coding protein_coding MGP_LPJ_T0011690.1 MGP_LPJ_G0009808.1 mouse_genomes_project 7 4074988 4075286 - Gm22649 misc_RNA misc_RNA MGP_LPJ_T0081611.1 MGP_LPJ_G0031628.1 mouse_genomes_project 7 15026579 15049597 - MGP_LPJ_P0081611 Ppp5c protein_coding protein_coding MGP_LPJ_T0081612.1 MGP_LPJ_G0031628.1 mouse_genomes_project 7 15027042 15029010 - Ppp5c protein_coding retained_intron MGP_LPJ_T0081613.1 MGP_LPJ_G0031628.1 mouse_genomes_project 7 15029079 15037365 - Ppp5c protein_coding retained_intron MGP_LPJ_T0081614.1 MGP_LPJ_G0031628.1 mouse_genomes_project 7 15029651 15049708 - Ppp5c protein_coding processed_transcript MGP_LPJ_T0081615.1 MGP_LPJ_G0031628.1 mouse_genomes_project 7 15029660 15031066 - Ppp5c protein_coding retained_intron MGP_LPJ_T0081616.1 MGP_LPJ_G0031628.1 mouse_genomes_project 7 15030454 15049678 - Ppp5c protein_coding processed_transcript MGP_LPJ_T0081617.1 MGP_LPJ_G0031628.1 mouse_genomes_project 7 15030478 15032016 - Ppp5c protein_coding retained_intron MGP_LPJ_T0081618.1 MGP_LPJ_G0031628.1 mouse_genomes_project 7 15031826 15046455 - Ppp5c protein_coding processed_transcript MGP_LPJ_T0081619.1 MGP_LPJ_G0031628.1 mouse_genomes_project 7 15037357 15049399 - Ppp5c protein_coding processed_transcript MGP_LPJ_T0081620.1 MGP_LPJ_G0031628.1 mouse_genomes_project 7 15044084 15049573 - Ppp5c protein_coding processed_transcript MGP_LPJ_T0099751.1 MGP_LPJ_G0038014.1 mouse_genomes_project 7 149190949 149191057 + Gm26143 snRNA snRNA MGP_LPJ_T0082575.1 MGP_LPJ_G0031894.1 mouse_genomes_project 7 29184389 29192757 + MGP_LPJ_P0082575 Zfp383 protein_coding nonsense_mediated_decay MGP_LPJ_T0082576.1 MGP_LPJ_G0031894.1 mouse_genomes_project 7 29184670 29192750 + MGP_LPJ_P0082576 Zfp383 protein_coding protein_coding MGP_LPJ_T0084858.1 MGP_LPJ_G0032444.1 mouse_genomes_project 7 102243568 102250636 - MGP_LPJ_P0084858 B3gnt6 protein_coding protein_coding MGP_LPJ_T0081966.1 MGP_LPJ_G0031743.1 mouse_genomes_project 7 23429636 23440461 + MGP_LPJ_P0081966 BC049730 protein_coding protein_coding MGP_LPJ_T0087552.1 MGP_LPJ_G0033179.1 mouse_genomes_project 7 149455413 149456443 - MGP_LPJ_P0087552 Ins2 protein_coding protein_coding MGP_LPJ_T0087553.1 MGP_LPJ_G0033179.1 mouse_genomes_project 7 149455413 149478621 - MGP_LPJ_P0087553 Ins2 protein_coding protein_coding MGP_LPJ_T0087554.1 MGP_LPJ_G0033179.1 mouse_genomes_project 7 149455416 149456484 - MGP_LPJ_P0087554 Ins2 protein_coding protein_coding MGP_LPJ_T0087555.1 MGP_LPJ_G0033179.1 mouse_genomes_project 7 149455416 149456456 - MGP_LPJ_P0087555 Ins2 protein_coding protein_coding MGP_LPJ_T0087556.1 MGP_LPJ_G0033179.1 mouse_genomes_project 7 149455416 149456450 - MGP_LPJ_P0087556 Ins2 protein_coding protein_coding MGP_LPJ_T0087557.1 MGP_LPJ_G0033179.1 mouse_genomes_project 7 149455418 149456475 - MGP_LPJ_P0087557 Ins2 protein_coding protein_coding MGP_LPJ_T0087558.1 MGP_LPJ_G0033179.1 mouse_genomes_project 7 149455466 149456338 - MGP_LPJ_P0087558 Ins2 protein_coding protein_coding MGP_LPJ_T0087559.1 MGP_LPJ_G0033179.1 mouse_genomes_project 7 149455470 149456291 - MGP_LPJ_P0087559 Ins2 protein_coding protein_coding MGP_LPJ_T0081152.1 MGP_LPJ_G0031458.1 mouse_genomes_project 7 1663765 1681058 - MGP_LPJ_P0081152 protein_coding unknown_likely_coding MGP_LPJ_T0081153.1 MGP_LPJ_G0031458.1 mouse_genomes_project 7 1670221 1674287 - protein_coding retained_intron MGP_LPJ_T0081154.1 MGP_LPJ_G0031458.1 mouse_genomes_project 7 1674681 1691800 - protein_coding retained_intron MGP_LPJ_T0081155.1 MGP_LPJ_G0031458.1 mouse_genomes_project 7 1675419 1677408 - MGP_LPJ_P0081155 protein_coding nonsense_mediated_decay MGP_LPJ_T0081156.1 MGP_LPJ_G0031458.1 mouse_genomes_project 7 1676260 1681529 - MGP_LPJ_P0081156 protein_coding protein_coding MGP_LPJ_T0081157.1 MGP_LPJ_G0031458.1 mouse_genomes_project 7 1677360 1691791 - MGP_LPJ_P0081157 protein_coding protein_coding MGP_LPJ_T0005273.1 MGP_LPJ_G0004481.1 mouse_genomes_project 7 87063774 87065163 + 2310044K18Rik antisense antisense MGP_LPJ_T0080973.1 MGP_LPJ_G0031428.1 mouse_genomes_project 7 552508 562087 - MGP_LPJ_P0080973 Tfpt protein_coding protein_coding MGP_LPJ_T0080974.1 MGP_LPJ_G0031428.1 mouse_genomes_project 7 552508 562132 - MGP_LPJ_P0080974 Tfpt protein_coding protein_coding MGP_LPJ_T0080975.1 MGP_LPJ_G0031428.1 mouse_genomes_project 7 552519 561289 - MGP_LPJ_P0080975 Tfpt protein_coding nonsense_mediated_decay MGP_LPJ_T0080976.1 MGP_LPJ_G0031428.1 mouse_genomes_project 7 552963 561782 - Tfpt protein_coding processed_transcript MGP_LPJ_T0080977.1 MGP_LPJ_G0031428.1 mouse_genomes_project 7 552979 562030 - MGP_LPJ_P0080977 Tfpt protein_coding protein_coding MGP_LPJ_T0080978.1 MGP_LPJ_G0031428.1 mouse_genomes_project 7 553158 562062 - MGP_LPJ_P0080978 Tfpt protein_coding nonsense_mediated_decay MGP_LPJ_T0080979.1 MGP_LPJ_G0031428.1 mouse_genomes_project 7 556788 561782 - MGP_LPJ_P0080979 Tfpt protein_coding nonsense_mediated_decay MGP_LPJ_T0015754.1 MGP_LPJ_G0013845.1 mouse_genomes_project 7 49557426 49557700 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102293.1 MGP_LPJ_G0040330.1 mouse_genomes_project 7 7672389 7704140 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0083565.1 MGP_LPJ_G0032130.1 mouse_genomes_project 7 46419133 46420904 - MGP_LPJ_P0083565 Ftl1-ps1 protein_coding protein_coding MGP_LPJ_T0083566.1 MGP_LPJ_G0032130.1 mouse_genomes_project 7 46419134 46419990 - Ftl1-ps1 protein_coding processed_transcript MGP_LPJ_T0083567.1 MGP_LPJ_G0032130.1 mouse_genomes_project 7 46419134 46420612 - Ftl1-ps1 protein_coding processed_transcript MGP_LPJ_T0083568.1 MGP_LPJ_G0032130.1 mouse_genomes_project 7 46419155 46420654 - Ftl1-ps1 protein_coding retained_intron MGP_LPJ_T0084151.1 MGP_LPJ_G0032273.1 mouse_genomes_project 7 74798179 75055033 - MGP_LPJ_P0084151 Mctp2 protein_coding protein_coding MGP_LPJ_T0084152.1 MGP_LPJ_G0032273.1 mouse_genomes_project 7 74800762 74833432 - MGP_LPJ_P0084152 Mctp2 protein_coding protein_coding MGP_LPJ_T0084153.1 MGP_LPJ_G0032273.1 mouse_genomes_project 7 74844560 74885310 - MGP_LPJ_P0084153 Mctp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0084154.1 MGP_LPJ_G0032273.1 mouse_genomes_project 7 74964506 74968494 - Mctp2 protein_coding retained_intron MGP_LPJ_T0084155.1 MGP_LPJ_G0032273.1 mouse_genomes_project 7 74995795 75055033 - Mctp2 protein_coding retained_intron MGP_LPJ_T0082610.1 MGP_LPJ_G0031907.1 mouse_genomes_project 7 29486991 29494867 - MGP_LPJ_P0082610 Capns1 protein_coding protein_coding MGP_LPJ_T0082611.1 MGP_LPJ_G0031907.1 mouse_genomes_project 7 29487039 29492929 - MGP_LPJ_P0082611 Capns1 protein_coding protein_coding MGP_LPJ_T0082612.1 MGP_LPJ_G0031907.1 mouse_genomes_project 7 29487217 29490061 - Capns1 protein_coding processed_transcript MGP_LPJ_T0082613.1 MGP_LPJ_G0031907.1 mouse_genomes_project 7 29487532 29493604 - Capns1 protein_coding processed_transcript MGP_LPJ_T0082614.1 MGP_LPJ_G0031907.1 mouse_genomes_project 7 29487556 29492235 - Capns1 protein_coding processed_transcript MGP_LPJ_T0082615.1 MGP_LPJ_G0031907.1 mouse_genomes_project 7 29489884 29493868 - MGP_LPJ_P0082615 Capns1 protein_coding protein_coding MGP_LPJ_T0082616.1 MGP_LPJ_G0031907.1 mouse_genomes_project 7 29493368 29494739 - Capns1 protein_coding retained_intron MGP_LPJ_T0083555.1 MGP_LPJ_G0032127.1 mouse_genomes_project 7 46378094 46379136 + MGP_LPJ_P0083555 Lhb protein_coding protein_coding MGP_LPJ_T0002219.1 MGP_LPJ_G0002128.1 mouse_genomes_project 7 239323 239658 + TEC TEC MGP_LPJ_T0085254.1 MGP_LPJ_G0032559.1 mouse_genomes_project 7 107731972 107732911 + MGP_LPJ_P0085254 Olfr603 protein_coding protein_coding MGP_LPJ_T0102439.1 MGP_LPJ_G0040475.1 mouse_genomes_project 7 106917671 106918606 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0085245.1 MGP_LPJ_G0032551.1 mouse_genomes_project 7 107499095 107500054 + MGP_LPJ_P0085245 protein_coding protein_coding MGP_LPJ_T0083475.1 MGP_LPJ_G0032106.1 mouse_genomes_project 7 46001688 46014115 - MGP_LPJ_P0083475 Fcgrt protein_coding protein_coding MGP_LPJ_T0084626.1 MGP_LPJ_G0032370.1 mouse_genomes_project 7 88444762 88463052 - MGP_LPJ_P0084626 protein_coding protein_coding MGP_LPJ_T0015716.1 MGP_LPJ_G0013807.1 mouse_genomes_project 7 33483885 33484472 + processed_pseudogene processed_pseudogene MGP_LPJ_T0084694.1 MGP_LPJ_G0032408.1 mouse_genomes_project 7 93553598 93579972 - MGP_LPJ_P0084694 l7Rn6 protein_coding nonsense_mediated_decay MGP_LPJ_T0084695.1 MGP_LPJ_G0032408.1 mouse_genomes_project 7 93553815 93579990 - MGP_LPJ_P0084695 l7Rn6 protein_coding protein_coding MGP_LPJ_T0084696.1 MGP_LPJ_G0032408.1 mouse_genomes_project 7 93553848 93579904 - MGP_LPJ_P0084696 l7Rn6 protein_coding protein_coding MGP_LPJ_T0084697.1 MGP_LPJ_G0032408.1 mouse_genomes_project 7 93554467 93560192 - l7Rn6 protein_coding retained_intron MGP_LPJ_T0084698.1 MGP_LPJ_G0032408.1 mouse_genomes_project 7 93568128 93580071 - l7Rn6 protein_coding processed_transcript MGP_LPJ_T0011693.1 MGP_LPJ_G0009811.1 mouse_genomes_project 7 13866328 13866576 + Gm24576 misc_RNA misc_RNA MGP_LPJ_T0086913.1 MGP_LPJ_G0033021.1 mouse_genomes_project 7 137530852 137570722 + MGP_LPJ_P0086913 Acadsb protein_coding protein_coding MGP_LPJ_T0086914.1 MGP_LPJ_G0033021.1 mouse_genomes_project 7 137530954 137569274 + MGP_LPJ_P0086914 Acadsb protein_coding protein_coding MGP_LPJ_T0086915.1 MGP_LPJ_G0033021.1 mouse_genomes_project 7 137545457 137551011 + Acadsb protein_coding retained_intron MGP_LPJ_T0086916.1 MGP_LPJ_G0033021.1 mouse_genomes_project 7 137545492 137549811 + Acadsb protein_coding retained_intron MGP_LPJ_T0086917.1 MGP_LPJ_G0033021.1 mouse_genomes_project 7 137549604 137554429 + Acadsb protein_coding retained_intron MGP_LPJ_T0086918.1 MGP_LPJ_G0033021.1 mouse_genomes_project 7 137550831 137570720 + Acadsb protein_coding retained_intron MGP_LPJ_T0086919.1 MGP_LPJ_G0033021.1 mouse_genomes_project 7 137556652 137560336 + Acadsb protein_coding retained_intron MGP_LPJ_T0102350.1 MGP_LPJ_G0040386.1 mouse_genomes_project 7 33284012 33284838 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0082940.1 MGP_LPJ_G0031970.1 mouse_genomes_project 7 33558266 33559665 + MGP_LPJ_P0082940 Scgb1b27 protein_coding protein_coding MGP_LPJ_T0082941.1 MGP_LPJ_G0031970.1 mouse_genomes_project 7 33558350 33559233 + MGP_LPJ_P0082941 Scgb1b27 protein_coding protein_coding MGP_LPJ_T0087471.1 MGP_LPJ_G0033168.1 mouse_genomes_project 7 149018473 149022330 - MGP_LPJ_P0087471 protein_coding protein_coding MGP_LPJ_T0009005.1 MGP_LPJ_G0007257.1 mouse_genomes_project 7 120037908 120041136 - Gm45017 lincRNA lincRNA MGP_LPJ_T0081361.1 MGP_LPJ_G0031554.1 mouse_genomes_project 7 10283974 10297796 - MGP_LPJ_P0081361 Zfp329 protein_coding protein_coding MGP_LPJ_T0081362.1 MGP_LPJ_G0031554.1 mouse_genomes_project 7 10283979 10297800 - MGP_LPJ_P0081362 Zfp329 protein_coding protein_coding MGP_LPJ_T0081363.1 MGP_LPJ_G0031554.1 mouse_genomes_project 7 10285064 10287061 - Zfp329 protein_coding processed_transcript MGP_LPJ_T0081364.1 MGP_LPJ_G0031554.1 mouse_genomes_project 7 10285087 10297794 - MGP_LPJ_P0081364 Zfp329 protein_coding protein_coding MGP_LPJ_T0102394.1 MGP_LPJ_G0040430.1 mouse_genomes_project 7 48882093 49406194 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0085557.1 MGP_LPJ_G0032734.1 mouse_genomes_project 7 113320268 113321215 + MGP_LPJ_P0085557 protein_coding protein_coding MGP_LPJ_T0084614.1 MGP_LPJ_G0032363.1 mouse_genomes_project 7 87684208 87802572 - MGP_LPJ_P0084614 Arnt2 protein_coding unknown_likely_coding MGP_LPJ_T0084615.1 MGP_LPJ_G0032363.1 mouse_genomes_project 7 87684214 87849279 - MGP_LPJ_P0084615 Arnt2 protein_coding protein_coding MGP_LPJ_T0085725.1 MGP_LPJ_G0032788.1 mouse_genomes_project 7 117774515 117942318 + Tead1 protein_coding retained_intron MGP_LPJ_T0085726.1 MGP_LPJ_G0032788.1 mouse_genomes_project 7 117852367 118000066 + MGP_LPJ_P0085726 Tead1 protein_coding protein_coding MGP_LPJ_T0085727.1 MGP_LPJ_G0032788.1 mouse_genomes_project 7 117855617 118000066 + MGP_LPJ_P0085727 Tead1 protein_coding protein_coding MGP_LPJ_T0085728.1 MGP_LPJ_G0032788.1 mouse_genomes_project 7 117858600 117907250 + Tead1 protein_coding processed_transcript MGP_LPJ_T0085729.1 MGP_LPJ_G0032788.1 mouse_genomes_project 7 117858651 118000066 + MGP_LPJ_P0085729 Tead1 protein_coding protein_coding MGP_LPJ_T0085730.1 MGP_LPJ_G0032788.1 mouse_genomes_project 7 117858696 118000066 + MGP_LPJ_P0085730 Tead1 protein_coding protein_coding MGP_LPJ_T0085731.1 MGP_LPJ_G0032788.1 mouse_genomes_project 7 117858696 118000066 + MGP_LPJ_P0085731 Tead1 protein_coding protein_coding MGP_LPJ_T0085732.1 MGP_LPJ_G0032788.1 mouse_genomes_project 7 117858696 118000066 + MGP_LPJ_P0085732 Tead1 protein_coding protein_coding MGP_LPJ_T0085733.1 MGP_LPJ_G0032788.1 mouse_genomes_project 7 117858749 117962597 + MGP_LPJ_P0085733 Tead1 protein_coding protein_coding MGP_LPJ_T0085734.1 MGP_LPJ_G0032788.1 mouse_genomes_project 7 117858759 117942297 + Tead1 protein_coding retained_intron MGP_LPJ_T0082109.1 MGP_LPJ_G0031777.1 mouse_genomes_project 7 24454786 24460810 - MGP_LPJ_P0082109 Tmem91 protein_coding protein_coding MGP_LPJ_T0082110.1 MGP_LPJ_G0031777.1 mouse_genomes_project 7 24454789 24459117 - MGP_LPJ_P0082110 Tmem91 protein_coding protein_coding MGP_LPJ_T0082111.1 MGP_LPJ_G0031777.1 mouse_genomes_project 7 24454889 24460734 - MGP_LPJ_P0082111 Tmem91 protein_coding protein_coding MGP_LPJ_T0082112.1 MGP_LPJ_G0031777.1 mouse_genomes_project 7 24454889 24460691 - MGP_LPJ_P0082112 Tmem91 protein_coding protein_coding MGP_LPJ_T0082113.1 MGP_LPJ_G0031777.1 mouse_genomes_project 7 24455691 24460763 - Tmem91 protein_coding retained_intron MGP_LPJ_T0082114.1 MGP_LPJ_G0031777.1 mouse_genomes_project 7 24456840 24460762 - Tmem91 protein_coding retained_intron MGP_LPJ_T0086609.1 MGP_LPJ_G0032964.1 mouse_genomes_project 7 133449283 133456686 - MGP_LPJ_P0086609 Zfp629 protein_coding protein_coding MGP_LPJ_T0086610.1 MGP_LPJ_G0032964.1 mouse_genomes_project 7 133449283 133457525 - MGP_LPJ_P0086610 Zfp629 protein_coding protein_coding MGP_LPJ_T0086611.1 MGP_LPJ_G0032964.1 mouse_genomes_project 7 133449283 133457468 - MGP_LPJ_P0086611 Zfp629 protein_coding protein_coding MGP_LPJ_T0086612.1 MGP_LPJ_G0032964.1 mouse_genomes_project 7 133450707 133457120 - MGP_LPJ_P0086612 Zfp629 protein_coding protein_coding MGP_LPJ_T0086613.1 MGP_LPJ_G0032964.1 mouse_genomes_project 7 133450839 133457511 - MGP_LPJ_P0086613 Zfp629 protein_coding protein_coding MGP_LPJ_T0086614.1 MGP_LPJ_G0032964.1 mouse_genomes_project 7 133451008 133458050 - MGP_LPJ_P0086614 Zfp629 protein_coding protein_coding MGP_LPJ_T0086615.1 MGP_LPJ_G0032964.1 mouse_genomes_project 7 133454156 133456613 - MGP_LPJ_P0086615 Zfp629 protein_coding protein_coding MGP_LPJ_T0086616.1 MGP_LPJ_G0032964.1 mouse_genomes_project 7 133454236 133457453 - MGP_LPJ_P0086616 Zfp629 protein_coding protein_coding MGP_LPJ_T0086617.1 MGP_LPJ_G0032964.1 mouse_genomes_project 7 133454303 133456618 - MGP_LPJ_P0086617 Zfp629 protein_coding protein_coding MGP_LPJ_T0102377.1 MGP_LPJ_G0040413.1 mouse_genomes_project 7 44834052 44834269 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0102358.1 MGP_LPJ_G0040394.1 mouse_genomes_project 7 38287551 38290291 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008983.1 MGP_LPJ_G0007243.1 mouse_genomes_project 7 97877897 98202456 + lincRNA lincRNA MGP_LPJ_T0008984.1 MGP_LPJ_G0007243.1 mouse_genomes_project 7 97877958 98608134 + lincRNA lincRNA MGP_LPJ_T0081365.1 MGP_LPJ_G0031555.1 mouse_genomes_project 7 10314475 10332422 + MGP_LPJ_P0081365 Zfp110 protein_coding protein_coding MGP_LPJ_T0081366.1 MGP_LPJ_G0031555.1 mouse_genomes_project 7 10314530 10317912 + Zfp110 protein_coding processed_transcript MGP_LPJ_T0081367.1 MGP_LPJ_G0031555.1 mouse_genomes_project 7 10314751 10318504 + Zfp110 protein_coding retained_intron MGP_LPJ_T0081368.1 MGP_LPJ_G0031555.1 mouse_genomes_project 7 10315197 10331770 + MGP_LPJ_P0081368 Zfp110 protein_coding protein_coding MGP_LPJ_T0081369.1 MGP_LPJ_G0031555.1 mouse_genomes_project 7 10318108 10326750 + Zfp110 protein_coding processed_transcript MGP_LPJ_T0087133.1 MGP_LPJ_G0033077.1 mouse_genomes_project 7 146689932 146702587 - MGP_LPJ_P0087133 Caly protein_coding unknown_likely_coding MGP_LPJ_T0005184.1 MGP_LPJ_G0004414.1 mouse_genomes_project 7 17568367 17569615 + 1700058P15Rik antisense antisense MGP_LPJ_T0082879.1 MGP_LPJ_G0031960.1 mouse_genomes_project 7 30450461 30454379 - MGP_LPJ_P0082879 Fxyd1 protein_coding protein_coding MGP_LPJ_T0082880.1 MGP_LPJ_G0031960.1 mouse_genomes_project 7 30450461 30454194 - MGP_LPJ_P0082880 Fxyd1 protein_coding protein_coding MGP_LPJ_T0082881.1 MGP_LPJ_G0031960.1 mouse_genomes_project 7 30450463 30452316 - Fxyd1 protein_coding retained_intron MGP_LPJ_T0082882.1 MGP_LPJ_G0031960.1 mouse_genomes_project 7 30450463 30454452 - MGP_LPJ_P0082882 Fxyd1 protein_coding protein_coding MGP_LPJ_T0082883.1 MGP_LPJ_G0031960.1 mouse_genomes_project 7 30450463 30453585 - MGP_LPJ_P0082883 Fxyd1 protein_coding protein_coding MGP_LPJ_T0082884.1 MGP_LPJ_G0031960.1 mouse_genomes_project 7 30450464 30451906 - MGP_LPJ_P0082884 Fxyd1 protein_coding protein_coding MGP_LPJ_T0082885.1 MGP_LPJ_G0031960.1 mouse_genomes_project 7 30450464 30454441 - MGP_LPJ_P0082885 Fxyd1 protein_coding protein_coding MGP_LPJ_T0082886.1 MGP_LPJ_G0031960.1 mouse_genomes_project 7 30450465 30450977 - Fxyd1 protein_coding retained_intron MGP_LPJ_T0082887.1 MGP_LPJ_G0031960.1 mouse_genomes_project 7 30450465 30453592 - MGP_LPJ_P0082887 Fxyd1 protein_coding protein_coding MGP_LPJ_T0082888.1 MGP_LPJ_G0031960.1 mouse_genomes_project 7 30450465 30453573 - MGP_LPJ_P0082888 Fxyd1 protein_coding protein_coding MGP_LPJ_T0082889.1 MGP_LPJ_G0031960.1 mouse_genomes_project 7 30450466 30453603 - MGP_LPJ_P0082889 Fxyd1 protein_coding protein_coding MGP_LPJ_T0082890.1 MGP_LPJ_G0031960.1 mouse_genomes_project 7 30450491 30454367 - MGP_LPJ_P0082890 Fxyd1 protein_coding protein_coding MGP_LPJ_T0082891.1 MGP_LPJ_G0031960.1 mouse_genomes_project 7 30450511 30453604 - MGP_LPJ_P0082891 Fxyd1 protein_coding protein_coding MGP_LPJ_T0082892.1 MGP_LPJ_G0031960.1 mouse_genomes_project 7 30450718 30454493 - MGP_LPJ_P0082892 Fxyd1 protein_coding protein_coding MGP_LPJ_T0082893.1 MGP_LPJ_G0031960.1 mouse_genomes_project 7 30450911 30452830 - Fxyd1 protein_coding retained_intron MGP_LPJ_T0082894.1 MGP_LPJ_G0031960.1 mouse_genomes_project 7 30452272 30454408 - Fxyd1 protein_coding retained_intron MGP_LPJ_T0082895.1 MGP_LPJ_G0031960.1 mouse_genomes_project 7 30452547 30455959 - Fxyd1 protein_coding retained_intron MGP_LPJ_T0086286.1 MGP_LPJ_G0032905.1 mouse_genomes_project 7 132337084 132343008 - MGP_LPJ_P0086286 Il27 protein_coding protein_coding MGP_LPJ_T0083189.1 MGP_LPJ_G0032025.1 mouse_genomes_project 7 44182689 44188606 + MGP_LPJ_P0083189 Lim2 protein_coding protein_coding MGP_LPJ_T0086788.1 MGP_LPJ_G0032999.1 mouse_genomes_project 7 134342521 134365564 - MGP_LPJ_P0086788 Tial1 protein_coding protein_coding MGP_LPJ_T0086789.1 MGP_LPJ_G0032999.1 mouse_genomes_project 7 134342969 134365544 - Tial1 protein_coding retained_intron MGP_LPJ_T0086790.1 MGP_LPJ_G0032999.1 mouse_genomes_project 7 134344155 134365565 - MGP_LPJ_P0086790 Tial1 protein_coding protein_coding MGP_LPJ_T0086791.1 MGP_LPJ_G0032999.1 mouse_genomes_project 7 134344542 134365215 - MGP_LPJ_P0086791 Tial1 protein_coding protein_coding MGP_LPJ_T0086792.1 MGP_LPJ_G0032999.1 mouse_genomes_project 7 134344956 134347650 - MGP_LPJ_P0086792 Tial1 protein_coding nonsense_mediated_decay MGP_LPJ_T0086793.1 MGP_LPJ_G0032999.1 mouse_genomes_project 7 134345027 134365101 - MGP_LPJ_P0086793 Tial1 protein_coding protein_coding MGP_LPJ_T0086794.1 MGP_LPJ_G0032999.1 mouse_genomes_project 7 134345027 134365247 - MGP_LPJ_P0086794 Tial1 protein_coding protein_coding MGP_LPJ_T0086795.1 MGP_LPJ_G0032999.1 mouse_genomes_project 7 134345027 134365609 - MGP_LPJ_P0086795 Tial1 protein_coding nonsense_mediated_decay MGP_LPJ_T0086796.1 MGP_LPJ_G0032999.1 mouse_genomes_project 7 134345058 134365238 - MGP_LPJ_P0086796 Tial1 protein_coding protein_coding MGP_LPJ_T0086797.1 MGP_LPJ_G0032999.1 mouse_genomes_project 7 134346558 134351101 - MGP_LPJ_P0086797 Tial1 protein_coding nonsense_mediated_decay MGP_LPJ_T0086798.1 MGP_LPJ_G0032999.1 mouse_genomes_project 7 134347033 134348452 - Tial1 protein_coding retained_intron MGP_LPJ_T0086799.1 MGP_LPJ_G0032999.1 mouse_genomes_project 7 134347556 134357745 - MGP_LPJ_P0086799 Tial1 protein_coding nonsense_mediated_decay MGP_LPJ_T0086800.1 MGP_LPJ_G0032999.1 mouse_genomes_project 7 134349509 134351325 - Tial1 protein_coding retained_intron MGP_LPJ_T0086801.1 MGP_LPJ_G0032999.1 mouse_genomes_project 7 134350602 134351633 - Tial1 protein_coding retained_intron MGP_LPJ_T0015857.1 MGP_LPJ_G0013948.1 mouse_genomes_project 7 128386758 128387085 + processed_pseudogene processed_pseudogene MGP_LPJ_T0084544.1 MGP_LPJ_G0032344.1 mouse_genomes_project 7 85175586 85201322 + MGP_LPJ_P0084544 Tm6sf1 protein_coding protein_coding MGP_LPJ_T0084545.1 MGP_LPJ_G0032344.1 mouse_genomes_project 7 85175605 85190464 + Tm6sf1 protein_coding retained_intron MGP_LPJ_T0084546.1 MGP_LPJ_G0032344.1 mouse_genomes_project 7 85175703 85181986 + Tm6sf1 protein_coding processed_transcript MGP_LPJ_T0084547.1 MGP_LPJ_G0032344.1 mouse_genomes_project 7 85175736 85201685 + MGP_LPJ_P0084547 Tm6sf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0084548.1 MGP_LPJ_G0032344.1 mouse_genomes_project 7 85176034 85195609 + MGP_LPJ_P0084548 Tm6sf1 protein_coding unknown_likely_coding MGP_LPJ_T0084549.1 MGP_LPJ_G0032344.1 mouse_genomes_project 7 85179276 85200666 + MGP_LPJ_P0084549 Tm6sf1 protein_coding protein_coding MGP_LPJ_T0084550.1 MGP_LPJ_G0032344.1 mouse_genomes_project 7 85186319 85189002 + Tm6sf1 protein_coding retained_intron MGP_LPJ_T0084551.1 MGP_LPJ_G0032344.1 mouse_genomes_project 7 85190079 85200654 + Tm6sf1 protein_coding retained_intron MGP_LPJ_T0085209.1 MGP_LPJ_G0032518.1 mouse_genomes_project 7 106855268 106859849 - MGP_LPJ_P0085209 Olfr544 protein_coding protein_coding MGP_LPJ_T0086561.1 MGP_LPJ_G0032957.1 mouse_genomes_project 7 133312302 133325231 + MGP_LPJ_P0086561 protein_coding protein_coding MGP_LPJ_T0086562.1 MGP_LPJ_G0032957.1 mouse_genomes_project 7 133313118 133316325 + protein_coding processed_transcript MGP_LPJ_T0086563.1 MGP_LPJ_G0032957.1 mouse_genomes_project 7 133318324 133327338 + MGP_LPJ_P0086563 protein_coding protein_coding MGP_LPJ_T0086564.1 MGP_LPJ_G0032957.1 mouse_genomes_project 7 133318511 133324495 + protein_coding retained_intron MGP_LPJ_T0086565.1 MGP_LPJ_G0032957.1 mouse_genomes_project 7 133318744 133324677 + MGP_LPJ_P0086565 protein_coding protein_coding MGP_LPJ_T0086566.1 MGP_LPJ_G0032957.1 mouse_genomes_project 7 133318750 133325087 + MGP_LPJ_P0086566 protein_coding protein_coding MGP_LPJ_T0086567.1 MGP_LPJ_G0032957.1 mouse_genomes_project 7 133319952 133327536 + protein_coding retained_intron MGP_LPJ_T0086568.1 MGP_LPJ_G0032957.1 mouse_genomes_project 7 133320166 133321057 + protein_coding retained_intron MGP_LPJ_T0010935.1 MGP_LPJ_G0009053.1 mouse_genomes_project 7 115827124 115827231 + miRNA miRNA MGP_LPJ_T0081596.1 MGP_LPJ_G0031622.1 mouse_genomes_project 7 14893091 14896693 + MGP_LPJ_P0081596 Gng8 protein_coding protein_coding MGP_LPJ_T0081597.1 MGP_LPJ_G0031622.1 mouse_genomes_project 7 14893517 14896703 + MGP_LPJ_P0081597 Gng8 protein_coding protein_coding MGP_LPJ_T0081598.1 MGP_LPJ_G0031622.1 mouse_genomes_project 7 14893576 14896691 + MGP_LPJ_P0081598 Gng8 protein_coding protein_coding MGP_LPJ_T0081599.1 MGP_LPJ_G0031622.1 mouse_genomes_project 7 14893626 14896694 + Gng8 protein_coding processed_transcript MGP_LPJ_T0081600.1 MGP_LPJ_G0031622.1 mouse_genomes_project 7 14895914 14896704 + Gng8 protein_coding retained_intron MGP_LPJ_T0081601.1 MGP_LPJ_G0031622.1 mouse_genomes_project 7 14896212 14896631 + Gng8 protein_coding retained_intron MGP_LPJ_T0015789.1 MGP_LPJ_G0013880.1 mouse_genomes_project 7 77770732 77771535 + processed_pseudogene processed_pseudogene MGP_LPJ_T0083474.1 MGP_LPJ_G0032105.1 mouse_genomes_project 7 45992051 46001062 - MGP_LPJ_P0083474 Rcn3 protein_coding unknown_likely_coding MGP_LPJ_T0081293.1 MGP_LPJ_G0031506.1 mouse_genomes_project 7 3572847 3590805 + MGP_LPJ_P0081293 Zfp28 protein_coding protein_coding MGP_LPJ_T0085233.1 MGP_LPJ_G0032540.1 mouse_genomes_project 7 107289657 107290602 - MGP_LPJ_P0085233 Olfr569 protein_coding protein_coding MGP_LPJ_T0005332.1 MGP_LPJ_G0004523.1 mouse_genomes_project 7 139210885 139214944 - Gm15718 antisense antisense MGP_LPJ_T0082391.1 MGP_LPJ_G0031852.1 mouse_genomes_project 7 27659957 27660656 + MGP_LPJ_P0082391 Gm10053 protein_coding protein_coding MGP_LPJ_T0081931.1 MGP_LPJ_G0031732.1 mouse_genomes_project 7 23141179 23156606 + MGP_LPJ_P0081931 Plaur protein_coding protein_coding MGP_LPJ_T0081932.1 MGP_LPJ_G0031732.1 mouse_genomes_project 7 23141180 23144098 + Plaur protein_coding retained_intron MGP_LPJ_T0081933.1 MGP_LPJ_G0031732.1 mouse_genomes_project 7 23141190 23153561 + Plaur protein_coding retained_intron MGP_LPJ_T0081934.1 MGP_LPJ_G0031732.1 mouse_genomes_project 7 23141195 23156607 + Plaur protein_coding retained_intron MGP_LPJ_T0081935.1 MGP_LPJ_G0031732.1 mouse_genomes_project 7 23141195 23156354 + MGP_LPJ_P0081935 Plaur protein_coding nonsense_mediated_decay MGP_LPJ_T0081936.1 MGP_LPJ_G0031732.1 mouse_genomes_project 7 23141195 23152594 + MGP_LPJ_P0081936 Plaur protein_coding nonsense_mediated_decay MGP_LPJ_T0085256.1 MGP_LPJ_G0032561.1 mouse_genomes_project 7 107790923 107791868 - MGP_LPJ_P0085256 Olfr600 protein_coding protein_coding MGP_LPJ_T0081553.1 MGP_LPJ_G0031614.1 mouse_genomes_project 7 14648941 14654186 - MGP_LPJ_P0081553 Ceacam15 protein_coding protein_coding MGP_LPJ_T0086899.1 MGP_LPJ_G0033017.1 mouse_genomes_project 7 137451976 137454309 + MGP_LPJ_P0086899 Fam24a protein_coding protein_coding MGP_LPJ_T0083270.1 MGP_LPJ_G0032057.1 mouse_genomes_project 7 44802166 44933539 + MGP_LPJ_P0083270 protein_coding protein_coding MGP_LPJ_T0102419.1 MGP_LPJ_G0040455.1 mouse_genomes_project 7 88971861 88974560 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008837.1 MGP_LPJ_G0007139.1 mouse_genomes_project 7 29498348 29501068 + lincRNA lincRNA MGP_LPJ_T0087401.1 MGP_LPJ_G0033149.1 mouse_genomes_project 7 148146479 148152012 + MGP_LPJ_P0087401 Cracr2b protein_coding protein_coding MGP_LPJ_T0087402.1 MGP_LPJ_G0033149.1 mouse_genomes_project 7 148147280 148150411 + MGP_LPJ_P0087402 Cracr2b protein_coding protein_coding MGP_LPJ_T0087403.1 MGP_LPJ_G0033149.1 mouse_genomes_project 7 148147345 148148844 + MGP_LPJ_P0087403 Cracr2b protein_coding protein_coding MGP_LPJ_T0087404.1 MGP_LPJ_G0033149.1 mouse_genomes_project 7 148148492 148150111 + MGP_LPJ_P0087404 Cracr2b protein_coding protein_coding MGP_LPJ_T0087405.1 MGP_LPJ_G0033149.1 mouse_genomes_project 7 148148792 148151454 + MGP_LPJ_P0087405 Cracr2b protein_coding protein_coding MGP_LPJ_T0087406.1 MGP_LPJ_G0033149.1 mouse_genomes_project 7 148149425 148150214 + Cracr2b protein_coding retained_intron MGP_LPJ_T0087407.1 MGP_LPJ_G0033149.1 mouse_genomes_project 7 148150475 148151059 + Cracr2b protein_coding retained_intron MGP_LPJ_T0087408.1 MGP_LPJ_G0033149.1 mouse_genomes_project 7 148150609 148151740 + Cracr2b protein_coding retained_intron MGP_LPJ_T0087409.1 MGP_LPJ_G0033149.1 mouse_genomes_project 7 148151055 148152012 + MGP_LPJ_P0087409 Cracr2b protein_coding protein_coding MGP_LPJ_T0008882.1 MGP_LPJ_G0007174.1 mouse_genomes_project 7 44630351 44631679 - Gm44707 lincRNA lincRNA MGP_LPJ_T0085155.1 MGP_LPJ_G0032506.1 mouse_genomes_project 7 106407496 106425650 + MGP_LPJ_P0085155 Xndc1 protein_coding protein_coding MGP_LPJ_T0085156.1 MGP_LPJ_G0032506.1 mouse_genomes_project 7 106407505 106422190 + Xndc1 protein_coding retained_intron MGP_LPJ_T0085157.1 MGP_LPJ_G0032506.1 mouse_genomes_project 7 106407507 106411972 + Xndc1 protein_coding processed_transcript MGP_LPJ_T0085158.1 MGP_LPJ_G0032506.1 mouse_genomes_project 7 106407580 106419817 + MGP_LPJ_P0085158 Xndc1 protein_coding protein_coding MGP_LPJ_T0085161.1 MGP_LPJ_G0032506.1 mouse_genomes_project 7 106407745 106424969 + MGP_LPJ_P0085161 Xndc1 protein_coding protein_coding MGP_LPJ_T0085165.1 MGP_LPJ_G0032506.1 mouse_genomes_project 7 106417874 106421161 + Xndc1 protein_coding retained_intron MGP_LPJ_T0085166.1 MGP_LPJ_G0032506.1 mouse_genomes_project 7 106420678 106425653 + MGP_LPJ_P0085166 Xndc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0085167.1 MGP_LPJ_G0032506.1 mouse_genomes_project 7 106422945 106424479 + Xndc1 protein_coding processed_transcript MGP_LPJ_T0085168.1 MGP_LPJ_G0032506.1 mouse_genomes_project 7 106422948 106424409 + Xndc1 protein_coding retained_intron MGP_LPJ_T0011695.1 MGP_LPJ_G0009813.1 mouse_genomes_project 7 29617483 29617854 + Gm24757 misc_RNA misc_RNA MGP_LPJ_T0015656.1 MGP_LPJ_G0013747.1 mouse_genomes_project 7 9640447 9641102 + processed_pseudogene processed_pseudogene MGP_LPJ_T0083432.1 MGP_LPJ_G0032089.1 mouse_genomes_project 7 45747625 45753128 + MGP_LPJ_P0083432 Pnkp protein_coding protein_coding MGP_LPJ_T0083433.1 MGP_LPJ_G0032089.1 mouse_genomes_project 7 45747637 45747992 + MGP_LPJ_P0083433 Pnkp protein_coding protein_coding MGP_LPJ_T0083434.1 MGP_LPJ_G0032089.1 mouse_genomes_project 7 45747645 45753470 + MGP_LPJ_P0083434 Pnkp protein_coding protein_coding MGP_LPJ_T0083435.1 MGP_LPJ_G0032089.1 mouse_genomes_project 7 45747653 45753134 + Pnkp protein_coding retained_intron MGP_LPJ_T0083436.1 MGP_LPJ_G0032089.1 mouse_genomes_project 7 45747659 45750938 + MGP_LPJ_P0083436 Pnkp protein_coding nonsense_mediated_decay MGP_LPJ_T0083437.1 MGP_LPJ_G0032089.1 mouse_genomes_project 7 45747826 45751869 + MGP_LPJ_P0083437 Pnkp protein_coding nonsense_mediated_decay MGP_LPJ_T0083438.1 MGP_LPJ_G0032089.1 mouse_genomes_project 7 45747828 45753127 + MGP_LPJ_P0083438 Pnkp protein_coding protein_coding MGP_LPJ_T0083439.1 MGP_LPJ_G0032089.1 mouse_genomes_project 7 45747834 45753128 + MGP_LPJ_P0083439 Pnkp protein_coding nonsense_mediated_decay MGP_LPJ_T0083440.1 MGP_LPJ_G0032089.1 mouse_genomes_project 7 45747865 45753119 + MGP_LPJ_P0083440 Pnkp protein_coding nonsense_mediated_decay MGP_LPJ_T0083441.1 MGP_LPJ_G0032089.1 mouse_genomes_project 7 45747880 45753128 + MGP_LPJ_P0083441 Pnkp protein_coding nonsense_mediated_decay MGP_LPJ_T0083442.1 MGP_LPJ_G0032089.1 mouse_genomes_project 7 45750166 45753126 + Pnkp protein_coding retained_intron MGP_LPJ_T0083443.1 MGP_LPJ_G0032089.1 mouse_genomes_project 7 45750936 45751887 + Pnkp protein_coding retained_intron MGP_LPJ_T0083444.1 MGP_LPJ_G0032089.1 mouse_genomes_project 7 45751892 45753128 + MGP_LPJ_P0083444 Pnkp protein_coding non_stop_decay MGP_LPJ_T0083445.1 MGP_LPJ_G0032089.1 mouse_genomes_project 7 45752031 45753126 + MGP_LPJ_P0083445 Pnkp protein_coding protein_coding MGP_LPJ_T0083446.1 MGP_LPJ_G0032089.1 mouse_genomes_project 7 45752214 45753148 + Pnkp protein_coding retained_intron MGP_LPJ_T0086454.1 MGP_LPJ_G0032932.1 mouse_genomes_project 7 132799817 132802119 - MGP_LPJ_P0086454 protein_coding protein_coding MGP_LPJ_T0086455.1 MGP_LPJ_G0032932.1 mouse_genomes_project 7 132799831 132805094 - protein_coding retained_intron MGP_LPJ_T0086459.1 MGP_LPJ_G0032932.1 mouse_genomes_project 7 132800997 132805864 - protein_coding processed_transcript MGP_LPJ_T0086460.1 MGP_LPJ_G0032932.1 mouse_genomes_project 7 132801000 132805806 - MGP_LPJ_P0086460 protein_coding protein_coding MGP_LPJ_T0086461.1 MGP_LPJ_G0032932.1 mouse_genomes_project 7 132801537 132805856 - protein_coding processed_transcript MGP_LPJ_T0081595.1 MGP_LPJ_G0031621.1 mouse_genomes_project 7 14875521 14888737 + MGP_LPJ_P0081595 Dact3 protein_coding protein_coding MGP_LPJ_T0008892.1 MGP_LPJ_G0007182.1 mouse_genomes_project 7 66317817 66326362 + Gm45052 lincRNA lincRNA MGP_LPJ_T0085604.1 MGP_LPJ_G0032760.1 mouse_genomes_project 7 114482730 114580164 - MGP_LPJ_P0085604 St5 protein_coding protein_coding MGP_LPJ_T0085605.1 MGP_LPJ_G0032760.1 mouse_genomes_project 7 114482730 114580164 - MGP_LPJ_P0085605 St5 protein_coding protein_coding MGP_LPJ_T0085606.1 MGP_LPJ_G0032760.1 mouse_genomes_project 7 114482739 114579585 - MGP_LPJ_P0085606 St5 protein_coding protein_coding MGP_LPJ_T0085607.1 MGP_LPJ_G0032760.1 mouse_genomes_project 7 114482739 114579585 - MGP_LPJ_P0085607 St5 protein_coding protein_coding MGP_LPJ_T0086940.1 MGP_LPJ_G0033031.1 mouse_genomes_project 7 138934564 139005147 - MGP_LPJ_P0086940 Fam53b protein_coding protein_coding MGP_LPJ_T0086941.1 MGP_LPJ_G0033031.1 mouse_genomes_project 7 138983697 139037930 - MGP_LPJ_P0086941 Fam53b protein_coding protein_coding MGP_LPJ_T0086942.1 MGP_LPJ_G0033031.1 mouse_genomes_project 7 138983697 139011616 - MGP_LPJ_P0086942 Fam53b protein_coding protein_coding MGP_LPJ_T0086943.1 MGP_LPJ_G0033031.1 mouse_genomes_project 7 138984532 139038564 - MGP_LPJ_P0086943 Fam53b protein_coding protein_coding MGP_LPJ_T0086944.1 MGP_LPJ_G0033031.1 mouse_genomes_project 7 139003770 139032162 - MGP_LPJ_P0086944 Fam53b protein_coding protein_coding MGP_LPJ_T0086945.1 MGP_LPJ_G0033031.1 mouse_genomes_project 7 139003881 139004958 - Fam53b protein_coding processed_transcript MGP_LPJ_T0086946.1 MGP_LPJ_G0033031.1 mouse_genomes_project 7 139003940 139027532 - Fam53b protein_coding processed_transcript MGP_LPJ_T0008912.1 MGP_LPJ_G0007195.1 mouse_genomes_project 7 70862650 70877184 - Gm16158 lincRNA lincRNA MGP_LPJ_T0008913.1 MGP_LPJ_G0007195.1 mouse_genomes_project 7 70862650 70877203 - Gm16158 lincRNA lincRNA MGP_LPJ_T0086738.1 MGP_LPJ_G0032989.1 mouse_genomes_project 7 134006804 134030896 + MGP_LPJ_P0086738 protein_coding protein_coding MGP_LPJ_T0086739.1 MGP_LPJ_G0032989.1 mouse_genomes_project 7 134006808 134011342 + MGP_LPJ_P0086739 protein_coding protein_coding MGP_LPJ_T0086740.1 MGP_LPJ_G0032989.1 mouse_genomes_project 7 134012046 134012753 + protein_coding retained_intron MGP_LPJ_T0086741.1 MGP_LPJ_G0032989.1 mouse_genomes_project 7 134026393 134028446 + protein_coding retained_intron MGP_LPJ_T0002333.1 MGP_LPJ_G0002241.1 mouse_genomes_project 7 132969370 132970617 - TEC TEC MGP_LPJ_T0101000.1 MGP_LPJ_G0039263.1 mouse_genomes_project 7 133364521 133364651 + Snora30 snoRNA snoRNA MGP_LPJ_T0010958.1 MGP_LPJ_G0009076.1 mouse_genomes_project 7 149430623 149430696 - Mir483 miRNA miRNA MGP_LPJ_T0102327.1 MGP_LPJ_G0040364.1 mouse_genomes_project 7 12282980 12283998 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008820.1 MGP_LPJ_G0007124.1 mouse_genomes_project 7 17244917 17248289 - Gm26821 lincRNA lincRNA MGP_LPJ_T0082260.1 MGP_LPJ_G0031814.1 mouse_genomes_project 7 26435889 26455696 + MGP_LPJ_P0082260 Blvrb protein_coding protein_coding MGP_LPJ_T0082261.1 MGP_LPJ_G0031814.1 mouse_genomes_project 7 26435943 26455550 + MGP_LPJ_P0082261 Blvrb protein_coding protein_coding MGP_LPJ_T0082262.1 MGP_LPJ_G0031814.1 mouse_genomes_project 7 26435965 26448068 + MGP_LPJ_P0082262 Blvrb protein_coding protein_coding MGP_LPJ_T0082263.1 MGP_LPJ_G0031814.1 mouse_genomes_project 7 26440344 26455536 + MGP_LPJ_P0082263 Blvrb protein_coding protein_coding MGP_LPJ_T0082264.1 MGP_LPJ_G0031814.1 mouse_genomes_project 7 26440370 26450570 + Blvrb protein_coding processed_transcript MGP_LPJ_T0085348.1 MGP_LPJ_G0032626.1 mouse_genomes_project 7 108864144 108874028 - MGP_LPJ_P0085348 Trim30c protein_coding protein_coding MGP_LPJ_T0009072.1 MGP_LPJ_G0007299.1 mouse_genomes_project 7 146585775 146586810 - Gm2044 lincRNA lincRNA MGP_LPJ_T0100956.1 MGP_LPJ_G0039219.1 mouse_genomes_project 7 46043913 46043996 - Snord32a snoRNA snoRNA MGP_LPJ_T0100975.1 MGP_LPJ_G0039238.1 mouse_genomes_project 7 86365620 86365752 + Gm22934 snoRNA snoRNA MGP_LPJ_T0085215.1 MGP_LPJ_G0032523.1 mouse_genomes_project 7 106954431 106955469 + MGP_LPJ_P0085215 Olfr550 protein_coding protein_coding MGP_LPJ_T0081324.1 MGP_LPJ_G0031527.1 mouse_genomes_project 7 7761330 7762326 + MGP_LPJ_P0081324 Vmn1r67 protein_coding protein_coding MGP_LPJ_T0102421.1 MGP_LPJ_G0040457.1 mouse_genomes_project 7 89041322 89042229 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0086962.1 MGP_LPJ_G0033035.1 mouse_genomes_project 7 139219158 139249514 - MGP_LPJ_P0086962 Ctbp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0086963.1 MGP_LPJ_G0033035.1 mouse_genomes_project 7 139219173 139249272 - MGP_LPJ_P0086963 Ctbp2 protein_coding protein_coding MGP_LPJ_T0086964.1 MGP_LPJ_G0033035.1 mouse_genomes_project 7 139221006 139260681 - MGP_LPJ_P0086964 Ctbp2 protein_coding protein_coding MGP_LPJ_T0086965.1 MGP_LPJ_G0033035.1 mouse_genomes_project 7 139224981 139258651 - MGP_LPJ_P0086965 Ctbp2 protein_coding protein_coding MGP_LPJ_T0086966.1 MGP_LPJ_G0033035.1 mouse_genomes_project 7 139228448 139360597 - MGP_LPJ_P0086966 Ctbp2 protein_coding protein_coding MGP_LPJ_T0086967.1 MGP_LPJ_G0033035.1 mouse_genomes_project 7 139248490 139361930 - Ctbp2 protein_coding processed_transcript MGP_LPJ_T0086968.1 MGP_LPJ_G0033035.1 mouse_genomes_project 7 139248490 139361806 - Ctbp2 protein_coding processed_transcript MGP_LPJ_T0086969.1 MGP_LPJ_G0033035.1 mouse_genomes_project 7 139248680 139361804 - MGP_LPJ_P0086969 Ctbp2 protein_coding protein_coding MGP_LPJ_T0086970.1 MGP_LPJ_G0033035.1 mouse_genomes_project 7 139248754 139351018 - Ctbp2 protein_coding processed_transcript MGP_LPJ_T0086971.1 MGP_LPJ_G0033035.1 mouse_genomes_project 7 139248859 139265292 - Ctbp2 protein_coding processed_transcript MGP_LPJ_T0086972.1 MGP_LPJ_G0033035.1 mouse_genomes_project 7 139248877 139364624 - Ctbp2 protein_coding processed_transcript MGP_LPJ_T0086973.1 MGP_LPJ_G0033035.1 mouse_genomes_project 7 139249145 139361074 - MGP_LPJ_P0086973 Ctbp2 protein_coding protein_coding MGP_LPJ_T0086974.1 MGP_LPJ_G0033035.1 mouse_genomes_project 7 139249187 139361883 - MGP_LPJ_P0086974 Ctbp2 protein_coding protein_coding MGP_LPJ_T0086975.1 MGP_LPJ_G0033035.1 mouse_genomes_project 7 139260612 139365223 - MGP_LPJ_P0086975 Ctbp2 protein_coding protein_coding MGP_LPJ_T0086976.1 MGP_LPJ_G0033035.1 mouse_genomes_project 7 139260630 139350061 - MGP_LPJ_P0086976 Ctbp2 protein_coding protein_coding MGP_LPJ_T0086977.1 MGP_LPJ_G0033035.1 mouse_genomes_project 7 139260631 139361770 - MGP_LPJ_P0086977 Ctbp2 protein_coding protein_coding MGP_LPJ_T0086978.1 MGP_LPJ_G0033035.1 mouse_genomes_project 7 139260674 139364710 - MGP_LPJ_P0086978 Ctbp2 protein_coding protein_coding MGP_LPJ_T0086979.1 MGP_LPJ_G0033035.1 mouse_genomes_project 7 139280453 139364710 - Ctbp2 protein_coding processed_transcript MGP_LPJ_T0086980.1 MGP_LPJ_G0033035.1 mouse_genomes_project 7 139318363 139361642 - Ctbp2 protein_coding retained_intron MGP_LPJ_T0085576.1 MGP_LPJ_G0032752.1 mouse_genomes_project 7 113883628 113891946 - MGP_LPJ_P0085576 Nlrp10 protein_coding protein_coding MGP_LPJ_T0081340.1 MGP_LPJ_G0031539.1 mouse_genomes_project 7 9578865 9579807 + MGP_LPJ_P0081340 Vmn1r78 protein_coding protein_coding MGP_LPJ_T0087696.1 MGP_LPJ_G0033211.1 mouse_genomes_project 7 151851943 151861827 - MGP_LPJ_P0087696 Ccnd1 protein_coding protein_coding MGP_LPJ_T0087697.1 MGP_LPJ_G0033211.1 mouse_genomes_project 7 151859304 151860207 - Ccnd1 protein_coding retained_intron MGP_LPJ_T0102307.1 MGP_LPJ_G0040344.1 mouse_genomes_project 7 9525870 9527148 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0087479.1 MGP_LPJ_G0033171.1 mouse_genomes_project 7 149133560 149145087 - MGP_LPJ_P0087479 Ctsd protein_coding protein_coding MGP_LPJ_T0087480.1 MGP_LPJ_G0033171.1 mouse_genomes_project 7 149138329 149150450 - MGP_LPJ_P0087480 Ctsd protein_coding protein_coding MGP_LPJ_T0087481.1 MGP_LPJ_G0033171.1 mouse_genomes_project 7 149138348 149150231 - MGP_LPJ_P0087481 Ctsd protein_coding nonsense_mediated_decay MGP_LPJ_T0087482.1 MGP_LPJ_G0033171.1 mouse_genomes_project 7 149145613 149150231 - Ctsd protein_coding retained_intron MGP_LPJ_T0082943.1 MGP_LPJ_G0031972.1 mouse_genomes_project 7 33727686 33758468 - MGP_LPJ_P0082943 Wtip protein_coding protein_coding MGP_LPJ_T0082944.1 MGP_LPJ_G0031972.1 mouse_genomes_project 7 33727948 33751273 - Wtip protein_coding processed_transcript MGP_LPJ_T0082945.1 MGP_LPJ_G0031972.1 mouse_genomes_project 7 33727999 33737727 - Wtip protein_coding retained_intron MGP_LPJ_T0082946.1 MGP_LPJ_G0031972.1 mouse_genomes_project 7 33728009 33758048 - MGP_LPJ_P0082946 Wtip protein_coding nonsense_mediated_decay MGP_LPJ_T0002308.1 MGP_LPJ_G0002216.1 mouse_genomes_project 7 83407777 83411133 + TEC TEC MGP_LPJ_T0085582.1 MGP_LPJ_G0032755.1 mouse_genomes_project 7 113996367 114046713 - MGP_LPJ_P0085582 Ric3 protein_coding protein_coding MGP_LPJ_T0085583.1 MGP_LPJ_G0032755.1 mouse_genomes_project 7 113996367 114019449 - MGP_LPJ_P0085583 Ric3 protein_coding nonsense_mediated_decay MGP_LPJ_T0085584.1 MGP_LPJ_G0032755.1 mouse_genomes_project 7 114000003 114046704 - MGP_LPJ_P0085584 Ric3 protein_coding protein_coding MGP_LPJ_T0085585.1 MGP_LPJ_G0032755.1 mouse_genomes_project 7 114007443 114046693 - Ric3 protein_coding retained_intron MGP_LPJ_T0085586.1 MGP_LPJ_G0032755.1 mouse_genomes_project 7 114019111 114046704 - Ric3 protein_coding retained_intron MGP_LPJ_T0085587.1 MGP_LPJ_G0032755.1 mouse_genomes_project 7 114044125 114046687 - Ric3 protein_coding processed_transcript MGP_LPJ_T0102401.1 MGP_LPJ_G0040437.1 mouse_genomes_project 7 49567615 49570840 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0015657.1 MGP_LPJ_G0013748.1 mouse_genomes_project 7 9956650 9957614 + processed_pseudogene processed_pseudogene MGP_LPJ_T0084623.1 MGP_LPJ_G0032367.1 mouse_genomes_project 7 88373951 88374899 + MGP_LPJ_P0084623 protein_coding protein_coding MGP_LPJ_T0102370.1 MGP_LPJ_G0040406.1 mouse_genomes_project 7 44769710 44771350 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0099721.1 MGP_LPJ_G0037984.1 mouse_genomes_project 7 95123613 95123719 - Gm22080 snRNA snRNA MGP_LPJ_T0015757.1 MGP_LPJ_G0013848.1 mouse_genomes_project 7 56222329 56223683 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099733.1 MGP_LPJ_G0037996.1 mouse_genomes_project 7 121954856 121954963 - Gm25423 snRNA snRNA MGP_LPJ_T0081088.1 MGP_LPJ_G0031448.1 mouse_genomes_project 7 1376927 1400442 - MGP_LPJ_P0081088 Gp6 protein_coding protein_coding MGP_LPJ_T0081089.1 MGP_LPJ_G0031448.1 mouse_genomes_project 7 1381534 1400426 - MGP_LPJ_P0081089 Gp6 protein_coding protein_coding MGP_LPJ_T0083848.1 MGP_LPJ_G0032209.1 mouse_genomes_project 7 51605590 52195554 + MGP_LPJ_P0083848 Nell1 protein_coding protein_coding MGP_LPJ_T0083849.1 MGP_LPJ_G0032209.1 mouse_genomes_project 7 51605590 52518452 + MGP_LPJ_P0083849 Nell1 protein_coding protein_coding MGP_LPJ_T0083850.1 MGP_LPJ_G0032209.1 mouse_genomes_project 7 51605795 51917639 + Nell1 protein_coding retained_intron MGP_LPJ_T0083851.1 MGP_LPJ_G0032209.1 mouse_genomes_project 7 51606060 52516555 + MGP_LPJ_P0083851 Nell1 protein_coding protein_coding MGP_LPJ_T0083852.1 MGP_LPJ_G0032209.1 mouse_genomes_project 7 51738432 51863418 + Nell1 protein_coding processed_transcript MGP_LPJ_T0083569.1 MGP_LPJ_G0032131.1 mouse_genomes_project 7 46424462 46429666 - MGP_LPJ_P0083569 Bax protein_coding protein_coding MGP_LPJ_T0081260.1 MGP_LPJ_G0031497.1 mouse_genomes_project 7 3164573 3255571 + MGP_LPJ_P0081260 Nlrp4c protein_coding protein_coding MGP_LPJ_T0081261.1 MGP_LPJ_G0031497.1 mouse_genomes_project 7 3164681 3255106 + MGP_LPJ_P0081261 Nlrp4c protein_coding protein_coding MGP_LPJ_T0102347.1 MGP_LPJ_G0040383.1 mouse_genomes_project 7 33055005 33056191 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0085588.1 MGP_LPJ_G0032756.1 mouse_genomes_project 7 114097489 114130717 - MGP_LPJ_P0085588 Lmo1 protein_coding protein_coding MGP_LPJ_T0100994.1 MGP_LPJ_G0039257.1 mouse_genomes_project 7 123450244 123450376 + Gm25683 snoRNA snoRNA MGP_LPJ_T0002252.1 MGP_LPJ_G0002161.1 mouse_genomes_project 7 47413449 47413965 + TEC TEC MGP_LPJ_T0087472.1 MGP_LPJ_G0033169.1 mouse_genomes_project 7 149059177 149060149 + MGP_LPJ_P0087472 protein_coding protein_coding MGP_LPJ_T0015750.1 MGP_LPJ_G0013841.1 mouse_genomes_project 7 45101345 45102273 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008852.1 MGP_LPJ_G0007153.1 mouse_genomes_project 7 35595072 35596385 + Gm28514 lincRNA lincRNA MGP_LPJ_T0086870.1 MGP_LPJ_G0033009.1 mouse_genomes_project 7 136582090 136692436 + MGP_LPJ_P0086870 Tacc2 protein_coding unknown_likely_coding MGP_LPJ_T0086871.1 MGP_LPJ_G0033009.1 mouse_genomes_project 7 136582090 136788127 + MGP_LPJ_P0086871 Tacc2 protein_coding protein_coding MGP_LPJ_T0086872.1 MGP_LPJ_G0033009.1 mouse_genomes_project 7 136582090 136788129 + MGP_LPJ_P0086872 Tacc2 protein_coding protein_coding MGP_LPJ_T0086873.1 MGP_LPJ_G0033009.1 mouse_genomes_project 7 136712575 136788129 + MGP_LPJ_P0086873 Tacc2 protein_coding protein_coding MGP_LPJ_T0086874.1 MGP_LPJ_G0033009.1 mouse_genomes_project 7 136712939 136788111 + MGP_LPJ_P0086874 Tacc2 protein_coding unknown_likely_coding MGP_LPJ_T0010873.1 MGP_LPJ_G0008991.1 mouse_genomes_project 7 28235625 28235691 + Gm44408 miRNA miRNA MGP_LPJ_T0002335.1 MGP_LPJ_G0002243.1 mouse_genomes_project 7 133285785 133287187 + TEC TEC MGP_LPJ_T0002232.1 MGP_LPJ_G0002141.1 mouse_genomes_project 7 34738775 34739392 - TEC TEC MGP_LPJ_T0010851.1 MGP_LPJ_G0008969.1 mouse_genomes_project 7 333399 333490 + Gm23450 miRNA miRNA MGP_LPJ_T0005662.1 MGP_LPJ_G0004767.1 mouse_genomes_project 7 83092054 83093853 + 5430400D12Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_LPJ_T0082519.1 MGP_LPJ_G0031883.1 mouse_genomes_project 7 28506694 28512837 + MGP_LPJ_P0082519 Ppp1r14a protein_coding protein_coding MGP_LPJ_T0085611.1 MGP_LPJ_G0032762.1 mouse_genomes_project 7 114682564 114695029 - MGP_LPJ_P0085611 BC051019 protein_coding protein_coding MGP_LPJ_T0085612.1 MGP_LPJ_G0032762.1 mouse_genomes_project 7 114682567 114695093 - MGP_LPJ_P0085612 BC051019 protein_coding protein_coding MGP_LPJ_T0085613.1 MGP_LPJ_G0032762.1 mouse_genomes_project 7 114686291 114691279 - MGP_LPJ_P0085613 BC051019 protein_coding protein_coding MGP_LPJ_T0102304.1 MGP_LPJ_G0040341.1 mouse_genomes_project 7 9377671 9378511 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0081243.1 MGP_LPJ_G0031488.1 mouse_genomes_project 7 2124279 2142329 + MGP_LPJ_P0081243 U2af2 protein_coding protein_coding MGP_LPJ_T0081244.1 MGP_LPJ_G0031488.1 mouse_genomes_project 7 2124424 2141204 + MGP_LPJ_P0081244 U2af2 protein_coding unknown_likely_coding MGP_LPJ_T0015670.1 MGP_LPJ_G0013761.1 mouse_genomes_project 7 11886835 11892074 + processed_pseudogene processed_pseudogene MGP_LPJ_T0085227.1 MGP_LPJ_G0032535.1 mouse_genomes_project 7 107139278 107158734 - MGP_LPJ_P0085227 Olfr78 protein_coding protein_coding MGP_LPJ_T0085228.1 MGP_LPJ_G0032535.1 mouse_genomes_project 7 107139278 107158734 - MGP_LPJ_P0085228 Olfr78 protein_coding protein_coding MGP_LPJ_T0085682.1 MGP_LPJ_G0032780.1 mouse_genomes_project 7 116047426 116075192 + MGP_LPJ_P0085682 Ctr9 protein_coding protein_coding MGP_LPJ_T0085683.1 MGP_LPJ_G0032780.1 mouse_genomes_project 7 116047470 116066435 + Ctr9 protein_coding retained_intron MGP_LPJ_T0085684.1 MGP_LPJ_G0032780.1 mouse_genomes_project 7 116047488 116049285 + Ctr9 protein_coding retained_intron MGP_LPJ_T0085685.1 MGP_LPJ_G0032780.1 mouse_genomes_project 7 116048690 116052532 + Ctr9 protein_coding processed_transcript MGP_LPJ_T0085686.1 MGP_LPJ_G0032780.1 mouse_genomes_project 7 116052511 116053933 + Ctr9 protein_coding retained_intron MGP_LPJ_T0085687.1 MGP_LPJ_G0032780.1 mouse_genomes_project 7 116065093 116065606 + Ctr9 protein_coding retained_intron MGP_LPJ_T0085688.1 MGP_LPJ_G0032780.1 mouse_genomes_project 7 116065093 116066838 + Ctr9 protein_coding retained_intron MGP_LPJ_T0085689.1 MGP_LPJ_G0032780.1 mouse_genomes_project 7 116069851 116071185 + Ctr9 protein_coding processed_transcript MGP_LPJ_T0015704.1 MGP_LPJ_G0013795.1 mouse_genomes_project 7 28388738 28389087 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010846.1 MGP_LPJ_G0008964.1 mouse_genomes_project 7 99405 99467 - Mir292b miRNA miRNA MGP_LPJ_T0099709.1 MGP_LPJ_G0037972.1 mouse_genomes_project 7 54651239 54651347 + Gm22444 snRNA snRNA MGP_LPJ_T0085520.1 MGP_LPJ_G0032704.1 mouse_genomes_project 7 112049387 112050517 - MGP_LPJ_P0085520 protein_coding protein_coding MGP_LPJ_T0085525.1 MGP_LPJ_G0032708.1 mouse_genomes_project 7 112140701 112142177 + MGP_LPJ_P0085525 Rbmxl2 protein_coding protein_coding MGP_LPJ_T0081681.1 MGP_LPJ_G0031658.1 mouse_genomes_project 7 17345290 17370697 + MGP_LPJ_P0081681 Rsph6a protein_coding protein_coding MGP_LPJ_T0081682.1 MGP_LPJ_G0031658.1 mouse_genomes_project 7 17345299 17370697 + MGP_LPJ_P0081682 Rsph6a protein_coding protein_coding MGP_LPJ_T0081683.1 MGP_LPJ_G0031658.1 mouse_genomes_project 7 17348043 17359994 + Rsph6a protein_coding processed_transcript MGP_LPJ_T0083933.1 MGP_LPJ_G0032226.1 mouse_genomes_project 7 59341203 59444572 - MGP_LPJ_P0083933 Gabra5 protein_coding unknown_likely_coding MGP_LPJ_T0084204.1 MGP_LPJ_G0032282.1 mouse_genomes_project 7 79173459 80137121 + MGP_LPJ_P0084204 Agbl1 protein_coding protein_coding MGP_LPJ_T0084205.1 MGP_LPJ_G0032282.1 mouse_genomes_project 7 79373290 79693323 + MGP_LPJ_P0084205 Agbl1 protein_coding protein_coding MGP_LPJ_T0084206.1 MGP_LPJ_G0032282.1 mouse_genomes_project 7 79373290 79751684 + MGP_LPJ_P0084206 Agbl1 protein_coding protein_coding MGP_LPJ_T0084069.1 MGP_LPJ_G0032256.1 mouse_genomes_project 7 68660921 68695758 - Lrrk1 protein_coding processed_transcript MGP_LPJ_T0084070.1 MGP_LPJ_G0032256.1 mouse_genomes_project 7 68692032 68830148 - MGP_LPJ_P0084070 Lrrk1 protein_coding protein_coding MGP_LPJ_T0084071.1 MGP_LPJ_G0032256.1 mouse_genomes_project 7 68692039 68698889 - Lrrk1 protein_coding retained_intron MGP_LPJ_T0084072.1 MGP_LPJ_G0032256.1 mouse_genomes_project 7 68692471 68717416 - MGP_LPJ_P0084072 Lrrk1 protein_coding nonsense_mediated_decay MGP_LPJ_T0084073.1 MGP_LPJ_G0032256.1 mouse_genomes_project 7 68699507 68703118 - Lrrk1 protein_coding retained_intron MGP_LPJ_T0084074.1 MGP_LPJ_G0032256.1 mouse_genomes_project 7 68780337 68782119 - Lrrk1 protein_coding processed_transcript MGP_LPJ_T0084075.1 MGP_LPJ_G0032256.1 mouse_genomes_project 7 68780505 68830105 - Lrrk1 protein_coding retained_intron MGP_LPJ_T0085708.1 MGP_LPJ_G0032785.1 mouse_genomes_project 7 117297524 117431563 + MGP_LPJ_P0085708 Mical2 protein_coding protein_coding MGP_LPJ_T0085709.1 MGP_LPJ_G0032785.1 mouse_genomes_project 7 117297558 117423993 + MGP_LPJ_P0085709 Mical2 protein_coding protein_coding MGP_LPJ_T0085710.1 MGP_LPJ_G0032785.1 mouse_genomes_project 7 117297558 117391116 + MGP_LPJ_P0085710 Mical2 protein_coding protein_coding MGP_LPJ_T0085711.1 MGP_LPJ_G0032785.1 mouse_genomes_project 7 117343848 117430344 + MGP_LPJ_P0085711 Mical2 protein_coding protein_coding MGP_LPJ_T0085712.1 MGP_LPJ_G0032785.1 mouse_genomes_project 7 117391729 117423116 + Mical2 protein_coding retained_intron MGP_LPJ_T0085713.1 MGP_LPJ_G0032785.1 mouse_genomes_project 7 117422353 117431563 + MGP_LPJ_P0085713 Mical2 protein_coding protein_coding MGP_LPJ_T0084656.1 MGP_LPJ_G0032396.1 mouse_genomes_project 7 90476516 90526203 + MGP_LPJ_P0084656 protein_coding protein_coding MGP_LPJ_T0015737.1 MGP_LPJ_G0013828.1 mouse_genomes_project 7 42649657 42649779 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005160.1 MGP_LPJ_G0004402.1 mouse_genomes_project 7 306718 316016 - Gm44151 antisense antisense MGP_LPJ_T0015732.1 MGP_LPJ_G0013823.1 mouse_genomes_project 7 41704620 41704822 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098431.1 MGP_LPJ_G0036712.1 mouse_genomes_project 7 84827551 84827678 + Mir1839 scaRNA scaRNA MGP_LPJ_T0005236.1 MGP_LPJ_G0004453.1 mouse_genomes_project 7 44733376 44776614 - antisense antisense MGP_LPJ_T0005187.1 MGP_LPJ_G0004417.1 mouse_genomes_project 7 18179101 18181175 + Gm16174 antisense antisense MGP_LPJ_T0082854.1 MGP_LPJ_G0031956.1 mouse_genomes_project 7 30349806 30365460 - MGP_LPJ_P0082854 Lsr protein_coding protein_coding MGP_LPJ_T0082855.1 MGP_LPJ_G0031956.1 mouse_genomes_project 7 30349811 30365498 - MGP_LPJ_P0082855 Lsr protein_coding protein_coding MGP_LPJ_T0082856.1 MGP_LPJ_G0031956.1 mouse_genomes_project 7 30349813 30365461 - MGP_LPJ_P0082856 Lsr protein_coding protein_coding MGP_LPJ_T0082857.1 MGP_LPJ_G0031956.1 mouse_genomes_project 7 30349815 30365356 - MGP_LPJ_P0082857 Lsr protein_coding protein_coding MGP_LPJ_T0082858.1 MGP_LPJ_G0031956.1 mouse_genomes_project 7 30350298 30365449 - MGP_LPJ_P0082858 Lsr protein_coding protein_coding MGP_LPJ_T0002275.1 MGP_LPJ_G0002184.1 mouse_genomes_project 7 76185943 76188015 + TEC TEC MGP_LPJ_T0015762.1 MGP_LPJ_G0013853.1 mouse_genomes_project 7 58081435 58082327 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002273.1 MGP_LPJ_G0002182.1 mouse_genomes_project 7 67780573 67780984 - TEC TEC MGP_LPJ_T0084612.1 MGP_LPJ_G0032362.1 mouse_genomes_project 7 87539079 87583260 - MGP_LPJ_P0084612 Abhd17c protein_coding protein_coding MGP_LPJ_T0084613.1 MGP_LPJ_G0032362.1 mouse_genomes_project 7 87543971 87579181 - Abhd17c protein_coding processed_transcript MGP_LPJ_T0087314.1 MGP_LPJ_G0033137.1 mouse_genomes_project 7 147956610 147957413 - MGP_LPJ_P0087314 Sct protein_coding protein_coding MGP_LPJ_T0087315.1 MGP_LPJ_G0033137.1 mouse_genomes_project 7 147956633 147957411 - MGP_LPJ_P0087315 Sct protein_coding protein_coding MGP_LPJ_T0009052.1 MGP_LPJ_G0007285.1 mouse_genomes_project 7 134503590 134505975 - Gm45121 lincRNA lincRNA MGP_LPJ_T0010842.1 MGP_LPJ_G0008960.1 mouse_genomes_project 7 98833 98916 + Mir290a miRNA miRNA MGP_LPJ_T0010914.1 MGP_LPJ_G0009032.1 mouse_genomes_project 7 64316159 64316227 - Mir344f miRNA miRNA MGP_LPJ_T0099727.1 MGP_LPJ_G0037990.1 mouse_genomes_project 7 113050103 113050161 - Gm25424 snRNA snRNA MGP_LPJ_T0011713.1 MGP_LPJ_G0009831.1 mouse_genomes_project 7 149346819 149346890 + Gm27483 misc_RNA misc_RNA MGP_LPJ_T0015821.1 MGP_LPJ_G0013912.1 mouse_genomes_project 7 102496341 102496655 - processed_pseudogene processed_pseudogene MGP_LPJ_T0084637.1 MGP_LPJ_G0032380.1 mouse_genomes_project 7 89840662 89841718 - MGP_LPJ_P0084637 Olfr308 protein_coding protein_coding MGP_LPJ_T0084006.1 MGP_LPJ_G0032243.1 mouse_genomes_project 7 66759247 66776127 - MGP_LPJ_P0084006 Mphosph10 protein_coding protein_coding MGP_LPJ_T0084007.1 MGP_LPJ_G0032243.1 mouse_genomes_project 7 66759996 66768381 - Mphosph10 protein_coding retained_intron MGP_LPJ_T0084008.1 MGP_LPJ_G0032243.1 mouse_genomes_project 7 66771848 66776095 - Mphosph10 protein_coding retained_intron MGP_LPJ_T0081939.1 MGP_LPJ_G0031734.1 mouse_genomes_project 7 23191557 23200180 + MGP_LPJ_P0081939 Zfp428 protein_coding protein_coding MGP_LPJ_T0081940.1 MGP_LPJ_G0031734.1 mouse_genomes_project 7 23191621 23200443 + MGP_LPJ_P0081940 Zfp428 protein_coding protein_coding MGP_LPJ_T0081941.1 MGP_LPJ_G0031734.1 mouse_genomes_project 7 23191650 23199864 + MGP_LPJ_P0081941 Zfp428 protein_coding protein_coding MGP_LPJ_T0081942.1 MGP_LPJ_G0031734.1 mouse_genomes_project 7 23191681 23200441 + MGP_LPJ_P0081942 Zfp428 protein_coding protein_coding MGP_LPJ_T0015662.1 MGP_LPJ_G0013753.1 mouse_genomes_project 7 10953667 10954511 - processed_pseudogene processed_pseudogene MGP_LPJ_T0087375.1 MGP_LPJ_G0033146.1 mouse_genomes_project 7 148122789 148128652 - Pidd1 protein_coding retained_intron MGP_LPJ_T0087376.1 MGP_LPJ_G0033146.1 mouse_genomes_project 7 148122789 148128016 - MGP_LPJ_P0087376 Pidd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0087377.1 MGP_LPJ_G0033146.1 mouse_genomes_project 7 148122789 148128013 - MGP_LPJ_P0087377 Pidd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0087378.1 MGP_LPJ_G0033146.1 mouse_genomes_project 7 148122789 148128685 - MGP_LPJ_P0087378 Pidd1 protein_coding protein_coding MGP_LPJ_T0087379.1 MGP_LPJ_G0033146.1 mouse_genomes_project 7 148122793 148128668 - Pidd1 protein_coding retained_intron MGP_LPJ_T0087380.1 MGP_LPJ_G0033146.1 mouse_genomes_project 7 148122801 148128016 - Pidd1 protein_coding retained_intron MGP_LPJ_T0087381.1 MGP_LPJ_G0033146.1 mouse_genomes_project 7 148123191 148128015 - MGP_LPJ_P0087381 Pidd1 protein_coding protein_coding MGP_LPJ_T0087382.1 MGP_LPJ_G0033146.1 mouse_genomes_project 7 148123201 148127980 - MGP_LPJ_P0087382 Pidd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0087383.1 MGP_LPJ_G0033146.1 mouse_genomes_project 7 148123206 148127980 - Pidd1 protein_coding retained_intron MGP_LPJ_T0087384.1 MGP_LPJ_G0033146.1 mouse_genomes_project 7 148124175 148124784 - Pidd1 protein_coding retained_intron MGP_LPJ_T0087385.1 MGP_LPJ_G0033146.1 mouse_genomes_project 7 148125709 148126949 - Pidd1 protein_coding retained_intron MGP_LPJ_T0087386.1 MGP_LPJ_G0033146.1 mouse_genomes_project 7 148126825 148128654 - Pidd1 protein_coding processed_transcript MGP_LPJ_T0085843.1 MGP_LPJ_G0032809.1 mouse_genomes_project 7 121742640 121779944 + MGP_LPJ_P0085843 Nucb2 protein_coding protein_coding MGP_LPJ_T0085844.1 MGP_LPJ_G0032809.1 mouse_genomes_project 7 121742655 121747838 + Nucb2 protein_coding processed_transcript MGP_LPJ_T0085845.1 MGP_LPJ_G0032809.1 mouse_genomes_project 7 121742686 121779803 + MGP_LPJ_P0085845 Nucb2 protein_coding protein_coding MGP_LPJ_T0085846.1 MGP_LPJ_G0032809.1 mouse_genomes_project 7 121766372 121776466 + MGP_LPJ_P0085846 Nucb2 protein_coding nonsense_mediated_decay MGP_LPJ_T0085522.1 MGP_LPJ_G0032706.1 mouse_genomes_project 7 112069204 112070308 + MGP_LPJ_P0085522 Olfr716 protein_coding protein_coding MGP_LPJ_T0082166.1 MGP_LPJ_G0031791.1 mouse_genomes_project 7 25366404 25404930 + MGP_LPJ_P0082166 Nlrp9a protein_coding protein_coding MGP_LPJ_T0082167.1 MGP_LPJ_G0031791.1 mouse_genomes_project 7 25366446 25404926 + MGP_LPJ_P0082167 Nlrp9a protein_coding protein_coding MGP_LPJ_T0082168.1 MGP_LPJ_G0031791.1 mouse_genomes_project 7 25366447 25398835 + MGP_LPJ_P0082168 Nlrp9a protein_coding protein_coding MGP_LPJ_T0082169.1 MGP_LPJ_G0031791.1 mouse_genomes_project 7 25366452 25395798 + Nlrp9a protein_coding processed_transcript MGP_LPJ_T0082170.1 MGP_LPJ_G0031791.1 mouse_genomes_project 7 25381540 25404763 + MGP_LPJ_P0082170 Nlrp9a protein_coding protein_coding MGP_LPJ_T0082171.1 MGP_LPJ_G0031791.1 mouse_genomes_project 7 25381540 25406509 + MGP_LPJ_P0082171 Nlrp9a protein_coding protein_coding MGP_LPJ_T0082582.1 MGP_LPJ_G0031897.1 mouse_genomes_project 7 29266165 29309571 + MGP_LPJ_P0082582 Zfp568 protein_coding protein_coding MGP_LPJ_T0082583.1 MGP_LPJ_G0031897.1 mouse_genomes_project 7 29267517 29312749 + MGP_LPJ_P0082583 Zfp568 protein_coding protein_coding MGP_LPJ_T0082584.1 MGP_LPJ_G0031897.1 mouse_genomes_project 7 29270001 29308112 + MGP_LPJ_P0082584 Zfp568 protein_coding protein_coding MGP_LPJ_T0082585.1 MGP_LPJ_G0031897.1 mouse_genomes_project 7 29270001 29308112 + MGP_LPJ_P0082585 Zfp568 protein_coding protein_coding MGP_LPJ_T0009003.1 MGP_LPJ_G0007256.1 mouse_genomes_project 7 119509299 119592959 - 4933406I18Rik lincRNA lincRNA MGP_LPJ_T0009004.1 MGP_LPJ_G0007256.1 mouse_genomes_project 7 119551497 119592819 - 4933406I18Rik lincRNA lincRNA MGP_LPJ_T0083457.1 MGP_LPJ_G0032096.1 mouse_genomes_project 7 45877046 45887251 - MGP_LPJ_P0083457 protein_coding protein_coding MGP_LPJ_T0005204.1 MGP_LPJ_G0004431.1 mouse_genomes_project 7 28354332 28355571 + 1110035H17Rik antisense pseudogene MGP_LPJ_T0005205.1 MGP_LPJ_G0004431.1 mouse_genomes_project 7 28354332 28355573 + 1110035H17Rik antisense antisense MGP_LPJ_T0083380.1 MGP_LPJ_G0032078.1 mouse_genomes_project 7 45455157 45469077 + MGP_LPJ_P0083380 Kcnc3 protein_coding protein_coding MGP_LPJ_T0083381.1 MGP_LPJ_G0032078.1 mouse_genomes_project 7 45455157 45469083 + MGP_LPJ_P0083381 Kcnc3 protein_coding unknown_likely_coding MGP_LPJ_T0083382.1 MGP_LPJ_G0032078.1 mouse_genomes_project 7 45455157 45469077 + MGP_LPJ_P0083382 Kcnc3 protein_coding protein_coding MGP_LPJ_T0008849.1 MGP_LPJ_G0007150.1 mouse_genomes_project 7 34773308 34778383 + Gm45097 lincRNA lincRNA MGP_LPJ_T0081426.1 MGP_LPJ_G0031572.1 mouse_genomes_project 7 10763104 10782828 - MGP_LPJ_P0081426 6330408A02Rik protein_coding protein_coding MGP_LPJ_T0081427.1 MGP_LPJ_G0031572.1 mouse_genomes_project 7 10763104 10782289 - MGP_LPJ_P0081427 6330408A02Rik protein_coding protein_coding MGP_LPJ_T0081428.1 MGP_LPJ_G0031572.1 mouse_genomes_project 7 10763105 10782866 - MGP_LPJ_P0081428 6330408A02Rik protein_coding protein_coding MGP_LPJ_T0081429.1 MGP_LPJ_G0031572.1 mouse_genomes_project 7 10769871 10782866 - 6330408A02Rik protein_coding retained_intron MGP_LPJ_T0081430.1 MGP_LPJ_G0031572.1 mouse_genomes_project 7 10777390 10782815 - 6330408A02Rik protein_coding retained_intron MGP_LPJ_T0081431.1 MGP_LPJ_G0031572.1 mouse_genomes_project 7 10777499 10782567 - 6330408A02Rik protein_coding retained_intron MGP_LPJ_T0081432.1 MGP_LPJ_G0031572.1 mouse_genomes_project 7 10781424 10782807 - MGP_LPJ_P0081432 6330408A02Rik protein_coding protein_coding MGP_LPJ_T0015739.1 MGP_LPJ_G0013830.1 mouse_genomes_project 7 42952160 42952415 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102317.1 MGP_LPJ_G0040354.1 mouse_genomes_project 7 11719166 11724710 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0082041.1 MGP_LPJ_G0031759.1 mouse_genomes_project 7 23972778 23978800 + MGP_LPJ_P0082041 Zfp526 protein_coding protein_coding MGP_LPJ_T0085224.1 MGP_LPJ_G0032532.1 mouse_genomes_project 7 107083881 107093600 + MGP_LPJ_P0085224 Olfr558 protein_coding protein_coding MGP_LPJ_T0008993.1 MGP_LPJ_G0007251.1 mouse_genomes_project 7 104679592 104707653 - Gm10603 lincRNA lincRNA MGP_LPJ_T0008994.1 MGP_LPJ_G0007251.1 mouse_genomes_project 7 104692247 104700008 - Gm10603 lincRNA lincRNA MGP_LPJ_T0008995.1 MGP_LPJ_G0007251.1 mouse_genomes_project 7 104696383 104707658 - Gm10603 lincRNA lincRNA MGP_LPJ_T0005224.1 MGP_LPJ_G0004446.1 mouse_genomes_project 7 34741826 34742179 + Gm45095 antisense antisense MGP_LPJ_T0085329.1 MGP_LPJ_G0032621.1 mouse_genomes_project 7 108804179 108815235 + MGP_LPJ_P0085329 protein_coding protein_coding MGP_LPJ_T0085330.1 MGP_LPJ_G0032621.1 mouse_genomes_project 7 108804181 108815235 + MGP_LPJ_P0085330 protein_coding protein_coding MGP_LPJ_T0085332.1 MGP_LPJ_G0032621.1 mouse_genomes_project 7 108804277 108818226 + MGP_LPJ_P0085332 protein_coding protein_coding MGP_LPJ_T0085333.1 MGP_LPJ_G0032621.1 mouse_genomes_project 7 108804286 108814522 + MGP_LPJ_P0085333 protein_coding protein_coding MGP_LPJ_T0086153.1 MGP_LPJ_G0032885.1 mouse_genomes_project 7 131237315 131264647 + MGP_LPJ_P0086153 Il4ra protein_coding protein_coding MGP_LPJ_T0086154.1 MGP_LPJ_G0032885.1 mouse_genomes_project 7 131237466 131257454 + Il4ra protein_coding retained_intron MGP_LPJ_T0086155.1 MGP_LPJ_G0032885.1 mouse_genomes_project 7 131237466 131252391 + MGP_LPJ_P0086155 Il4ra protein_coding protein_coding MGP_LPJ_T0086156.1 MGP_LPJ_G0032885.1 mouse_genomes_project 7 131237471 131255171 + MGP_LPJ_P0086156 Il4ra protein_coding protein_coding MGP_LPJ_T0086157.1 MGP_LPJ_G0032885.1 mouse_genomes_project 7 131237482 131263140 + MGP_LPJ_P0086157 Il4ra protein_coding nonsense_mediated_decay MGP_LPJ_T0082938.1 MGP_LPJ_G0031968.1 mouse_genomes_project 7 33214090 33215274 + MGP_LPJ_P0082938 Scgb1b24 protein_coding protein_coding MGP_LPJ_T0086148.1 MGP_LPJ_G0032883.1 mouse_genomes_project 7 131117845 131135411 + MGP_LPJ_P0086148 Kdm8 protein_coding protein_coding MGP_LPJ_T0086149.1 MGP_LPJ_G0032883.1 mouse_genomes_project 7 131117853 131133163 + MGP_LPJ_P0086149 Kdm8 protein_coding protein_coding MGP_LPJ_T0015697.1 MGP_LPJ_G0013788.1 mouse_genomes_project 7 24675435 24675787 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102444.1 MGP_LPJ_G0040480.1 mouse_genomes_project 7 107657489 107658416 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0087186.1 MGP_LPJ_G0033104.1 mouse_genomes_project 7 147332727 147333830 + MGP_LPJ_P0087186 Olfr541 protein_coding protein_coding MGP_LPJ_T0008988.1 MGP_LPJ_G0007247.1 mouse_genomes_project 7 102754108 102779772 - Gm15506 lincRNA lincRNA MGP_LPJ_T0002265.1 MGP_LPJ_G0002174.1 mouse_genomes_project 7 66104886 66105245 + TEC TEC MGP_LPJ_T0085850.1 MGP_LPJ_G0032811.1 mouse_genomes_project 7 123392263 123404104 - MGP_LPJ_P0085850 Rps15a protein_coding protein_coding MGP_LPJ_T0085851.1 MGP_LPJ_G0032811.1 mouse_genomes_project 7 123392269 123403178 - MGP_LPJ_P0085851 Rps15a protein_coding protein_coding MGP_LPJ_T0085852.1 MGP_LPJ_G0032811.1 mouse_genomes_project 7 123396936 123403593 - MGP_LPJ_P0085852 Rps15a protein_coding protein_coding MGP_LPJ_T0085853.1 MGP_LPJ_G0032811.1 mouse_genomes_project 7 123397041 123403476 - MGP_LPJ_P0085853 Rps15a protein_coding protein_coding MGP_LPJ_T0085854.1 MGP_LPJ_G0032811.1 mouse_genomes_project 7 123397535 123403150 - Rps15a protein_coding retained_intron MGP_LPJ_T0085855.1 MGP_LPJ_G0032811.1 mouse_genomes_project 7 123397870 123404045 - MGP_LPJ_P0085855 Rps15a protein_coding protein_coding MGP_LPJ_T0085856.1 MGP_LPJ_G0032811.1 mouse_genomes_project 7 123402706 123404044 - MGP_LPJ_P0085856 Rps15a protein_coding protein_coding MGP_LPJ_T0084702.1 MGP_LPJ_G0032411.1 mouse_genomes_project 7 93787999 93882509 + MGP_LPJ_P0084702 Picalm protein_coding protein_coding MGP_LPJ_T0084703.1 MGP_LPJ_G0032411.1 mouse_genomes_project 7 93788327 93882165 + MGP_LPJ_P0084703 Picalm protein_coding unknown_likely_coding MGP_LPJ_T0008905.1 MGP_LPJ_G0007192.1 mouse_genomes_project 7 70286985 70307679 - 4833412C05Rik lincRNA lincRNA MGP_LPJ_T0085624.1 MGP_LPJ_G0032767.1 mouse_genomes_project 7 114881791 114884711 - Dennd5a protein_coding retained_intron MGP_LPJ_T0085625.1 MGP_LPJ_G0032767.1 mouse_genomes_project 7 114881791 114950547 - MGP_LPJ_P0085625 Dennd5a protein_coding protein_coding MGP_LPJ_T0085626.1 MGP_LPJ_G0032767.1 mouse_genomes_project 7 114881791 114950617 - MGP_LPJ_P0085626 Dennd5a protein_coding protein_coding MGP_LPJ_T0085627.1 MGP_LPJ_G0032767.1 mouse_genomes_project 7 114884391 114885568 - Dennd5a protein_coding retained_intron MGP_LPJ_T0085628.1 MGP_LPJ_G0032767.1 mouse_genomes_project 7 114887083 114888476 - Dennd5a protein_coding retained_intron MGP_LPJ_T0085629.1 MGP_LPJ_G0032767.1 mouse_genomes_project 7 114896234 114909338 - Dennd5a protein_coding retained_intron MGP_LPJ_T0085630.1 MGP_LPJ_G0032767.1 mouse_genomes_project 7 114909951 114913745 - Dennd5a protein_coding processed_transcript MGP_LPJ_T0085631.1 MGP_LPJ_G0032767.1 mouse_genomes_project 7 114923121 114950470 - Dennd5a protein_coding processed_transcript MGP_LPJ_T0080955.1 MGP_LPJ_G0031423.1 mouse_genomes_project 7 305754 334783 + MGP_LPJ_P0080955 Cacng8 protein_coding protein_coding MGP_LPJ_T0080956.1 MGP_LPJ_G0031423.1 mouse_genomes_project 7 309242 333926 + MGP_LPJ_P0080956 Cacng8 protein_coding protein_coding MGP_LPJ_T0080957.1 MGP_LPJ_G0031423.1 mouse_genomes_project 7 309543 310078 + MGP_LPJ_P0080957 Cacng8 protein_coding protein_coding MGP_LPJ_T0082393.1 MGP_LPJ_G0031854.1 mouse_genomes_project 7 27668936 27672662 - MGP_LPJ_P0082393 Nccrp1 protein_coding protein_coding MGP_LPJ_T0082989.1 MGP_LPJ_G0031979.1 mouse_genomes_project 7 34291164 34306608 - MGP_LPJ_P0082989 Kctd15 protein_coding protein_coding MGP_LPJ_T0082990.1 MGP_LPJ_G0031979.1 mouse_genomes_project 7 34291165 34305047 - MGP_LPJ_P0082990 Kctd15 protein_coding protein_coding MGP_LPJ_T0082991.1 MGP_LPJ_G0031979.1 mouse_genomes_project 7 34291169 34309079 - MGP_LPJ_P0082991 Kctd15 protein_coding protein_coding MGP_LPJ_T0082992.1 MGP_LPJ_G0031979.1 mouse_genomes_project 7 34292332 34300923 - Kctd15 protein_coding processed_transcript MGP_LPJ_T0082993.1 MGP_LPJ_G0031979.1 mouse_genomes_project 7 34302165 34306599 - MGP_LPJ_P0082993 Kctd15 protein_coding protein_coding MGP_LPJ_T0082994.1 MGP_LPJ_G0031979.1 mouse_genomes_project 7 34304841 34305236 - Kctd15 protein_coding processed_transcript MGP_LPJ_T0082995.1 MGP_LPJ_G0031979.1 mouse_genomes_project 7 34304841 34305522 - Kctd15 protein_coding processed_transcript MGP_LPJ_T0082996.1 MGP_LPJ_G0031979.1 mouse_genomes_project 7 34308939 34310302 - Kctd15 protein_coding processed_transcript MGP_LPJ_T0010887.1 MGP_LPJ_G0009005.1 mouse_genomes_project 7 45740182 45740255 + Mir707 miRNA miRNA MGP_LPJ_T0087038.1 MGP_LPJ_G0033052.1 mouse_genomes_project 7 142091129 142118060 - MGP_LPJ_P0087038 Mki67 protein_coding protein_coding MGP_LPJ_T0015658.1 MGP_LPJ_G0013749.1 mouse_genomes_project 7 10040980 10042427 + processed_pseudogene processed_pseudogene MGP_LPJ_T0081453.1 MGP_LPJ_G0031577.1 mouse_genomes_project 7 11060210 11077182 - MGP_LPJ_P0081453 Bsph2 protein_coding protein_coding MGP_LPJ_T0081454.1 MGP_LPJ_G0031577.1 mouse_genomes_project 7 11060212 11077182 - MGP_LPJ_P0081454 Bsph2 protein_coding nonsense_mediated_decay MGP_LPJ_T0005246.1 MGP_LPJ_G0004460.1 mouse_genomes_project 7 58107246 58108211 - Gm44506 antisense antisense MGP_LPJ_T0084631.1 MGP_LPJ_G0032375.1 mouse_genomes_project 7 89009184 89020450 - MGP_LPJ_P0084631 Vmn2r70 protein_coding protein_coding MGP_LPJ_T0087350.1 MGP_LPJ_G0033145.1 mouse_genomes_project 7 148114420 148122569 - MGP_LPJ_P0087350 Slc25a22 protein_coding protein_coding MGP_LPJ_T0087351.1 MGP_LPJ_G0033145.1 mouse_genomes_project 7 148114425 148122504 - Slc25a22 protein_coding retained_intron MGP_LPJ_T0087352.1 MGP_LPJ_G0033145.1 mouse_genomes_project 7 148114425 148122308 - MGP_LPJ_P0087352 Slc25a22 protein_coding protein_coding MGP_LPJ_T0087353.1 MGP_LPJ_G0033145.1 mouse_genomes_project 7 148114425 148119271 - MGP_LPJ_P0087353 Slc25a22 protein_coding protein_coding MGP_LPJ_T0087354.1 MGP_LPJ_G0033145.1 mouse_genomes_project 7 148114425 148122314 - MGP_LPJ_P0087354 Slc25a22 protein_coding protein_coding MGP_LPJ_T0087355.1 MGP_LPJ_G0033145.1 mouse_genomes_project 7 148114428 148120018 - Slc25a22 protein_coding retained_intron MGP_LPJ_T0087356.1 MGP_LPJ_G0033145.1 mouse_genomes_project 7 148114428 148122315 - MGP_LPJ_P0087356 Slc25a22 protein_coding nonsense_mediated_decay MGP_LPJ_T0087357.1 MGP_LPJ_G0033145.1 mouse_genomes_project 7 148114432 148117430 - MGP_LPJ_P0087357 Slc25a22 protein_coding protein_coding MGP_LPJ_T0087358.1 MGP_LPJ_G0033145.1 mouse_genomes_project 7 148115630 148116715 - Slc25a22 protein_coding retained_intron MGP_LPJ_T0087359.1 MGP_LPJ_G0033145.1 mouse_genomes_project 7 148115696 148116736 - Slc25a22 protein_coding retained_intron MGP_LPJ_T0087360.1 MGP_LPJ_G0033145.1 mouse_genomes_project 7 148115862 148116275 - MGP_LPJ_P0087360 Slc25a22 protein_coding protein_coding MGP_LPJ_T0087361.1 MGP_LPJ_G0033145.1 mouse_genomes_project 7 148116044 148117525 - Slc25a22 protein_coding retained_intron MGP_LPJ_T0087362.1 MGP_LPJ_G0033145.1 mouse_genomes_project 7 148116252 148120074 - MGP_LPJ_P0087362 Slc25a22 protein_coding protein_coding MGP_LPJ_T0087363.1 MGP_LPJ_G0033145.1 mouse_genomes_project 7 148116302 148119100 - MGP_LPJ_P0087363 Slc25a22 protein_coding protein_coding MGP_LPJ_T0087364.1 MGP_LPJ_G0033145.1 mouse_genomes_project 7 148116315 148118992 - MGP_LPJ_P0087364 Slc25a22 protein_coding nonsense_mediated_decay MGP_LPJ_T0087365.1 MGP_LPJ_G0033145.1 mouse_genomes_project 7 148116319 148118684 - MGP_LPJ_P0087365 Slc25a22 protein_coding protein_coding MGP_LPJ_T0087366.1 MGP_LPJ_G0033145.1 mouse_genomes_project 7 148116569 148118647 - Slc25a22 protein_coding retained_intron MGP_LPJ_T0087367.1 MGP_LPJ_G0033145.1 mouse_genomes_project 7 148116583 148122270 - MGP_LPJ_P0087367 Slc25a22 protein_coding nonsense_mediated_decay MGP_LPJ_T0087368.1 MGP_LPJ_G0033145.1 mouse_genomes_project 7 148116721 148120000 - Slc25a22 protein_coding processed_transcript MGP_LPJ_T0087369.1 MGP_LPJ_G0033145.1 mouse_genomes_project 7 148116787 148122269 - MGP_LPJ_P0087369 Slc25a22 protein_coding protein_coding MGP_LPJ_T0087370.1 MGP_LPJ_G0033145.1 mouse_genomes_project 7 148117261 148120001 - Slc25a22 protein_coding retained_intron MGP_LPJ_T0087371.1 MGP_LPJ_G0033145.1 mouse_genomes_project 7 148117377 148119277 - MGP_LPJ_P0087371 Slc25a22 protein_coding protein_coding MGP_LPJ_T0087372.1 MGP_LPJ_G0033145.1 mouse_genomes_project 7 148118273 148119281 - MGP_LPJ_P0087372 Slc25a22 protein_coding protein_coding MGP_LPJ_T0087373.1 MGP_LPJ_G0033145.1 mouse_genomes_project 7 148118606 148119220 - MGP_LPJ_P0087373 Slc25a22 protein_coding protein_coding MGP_LPJ_T0087374.1 MGP_LPJ_G0033145.1 mouse_genomes_project 7 148118638 148119271 - MGP_LPJ_P0087374 Slc25a22 protein_coding protein_coding MGP_LPJ_T0008876.1 MGP_LPJ_G0007170.1 mouse_genomes_project 7 41621785 41628565 + lincRNA lincRNA MGP_LPJ_T0005301.1 MGP_LPJ_G0004499.1 mouse_genomes_project 7 121243246 121243818 + Sox6os antisense antisense MGP_LPJ_T0015802.1 MGP_LPJ_G0013893.1 mouse_genomes_project 7 88377549 88378672 - processed_pseudogene processed_pseudogene MGP_LPJ_T0081133.1 MGP_LPJ_G0031453.1 mouse_genomes_project 7 1530080 1531540 - Tnni3 protein_coding retained_intron MGP_LPJ_T0081134.1 MGP_LPJ_G0031453.1 mouse_genomes_project 7 1530080 1534144 - MGP_LPJ_P0081134 Tnni3 protein_coding protein_coding MGP_LPJ_T0081135.1 MGP_LPJ_G0031453.1 mouse_genomes_project 7 1530083 1532183 - Tnni3 protein_coding retained_intron MGP_LPJ_T0081136.1 MGP_LPJ_G0031453.1 mouse_genomes_project 7 1532053 1534410 - MGP_LPJ_P0081136 Tnni3 protein_coding protein_coding MGP_LPJ_T0081137.1 MGP_LPJ_G0031453.1 mouse_genomes_project 7 1532092 1535845 - MGP_LPJ_P0081137 Tnni3 protein_coding protein_coding MGP_LPJ_T0081138.1 MGP_LPJ_G0031453.1 mouse_genomes_project 7 1532657 1534058 - Tnni3 protein_coding retained_intron MGP_LPJ_T0081139.1 MGP_LPJ_G0031453.1 mouse_genomes_project 7 1532956 1534108 - Tnni3 protein_coding retained_intron MGP_LPJ_T0011691.1 MGP_LPJ_G0009809.1 mouse_genomes_project 7 10853818 10854098 + Gm24909 misc_RNA misc_RNA MGP_LPJ_T0085326.1 MGP_LPJ_G0032620.1 mouse_genomes_project 7 108803886 108819350 - protein_coding processed_transcript MGP_LPJ_T0085327.1 MGP_LPJ_G0032620.1 mouse_genomes_project 7 108803889 108833411 - MGP_LPJ_P0085327 protein_coding protein_coding MGP_LPJ_T0085328.1 MGP_LPJ_G0032620.1 mouse_genomes_project 7 108803889 108833412 - MGP_LPJ_P0085328 protein_coding protein_coding MGP_LPJ_T0085339.1 MGP_LPJ_G0032620.1 mouse_genomes_project 7 108821710 108833419 - MGP_LPJ_P0085339 protein_coding protein_coding MGP_LPJ_T0085341.1 MGP_LPJ_G0032620.1 mouse_genomes_project 7 108825489 108833299 - protein_coding processed_transcript MGP_LPJ_T0085342.1 MGP_LPJ_G0032620.1 mouse_genomes_project 7 108826371 108833422 - protein_coding retained_intron MGP_LPJ_T0087570.1 MGP_LPJ_G0033183.1 mouse_genomes_project 7 149804533 149819252 + MGP_LPJ_P0087570 Tspan32 protein_coding protein_coding MGP_LPJ_T0087571.1 MGP_LPJ_G0033183.1 mouse_genomes_project 7 149804547 149806972 + Tspan32 protein_coding retained_intron MGP_LPJ_T0087572.1 MGP_LPJ_G0033183.1 mouse_genomes_project 7 149805125 149819410 + MGP_LPJ_P0087572 Tspan32 protein_coding protein_coding MGP_LPJ_T0087573.1 MGP_LPJ_G0033183.1 mouse_genomes_project 7 149805150 149819249 + MGP_LPJ_P0087573 Tspan32 protein_coding nonsense_mediated_decay MGP_LPJ_T0087574.1 MGP_LPJ_G0033183.1 mouse_genomes_project 7 149805158 149819252 + MGP_LPJ_P0087574 Tspan32 protein_coding protein_coding MGP_LPJ_T0087575.1 MGP_LPJ_G0033183.1 mouse_genomes_project 7 149805172 149819252 + MGP_LPJ_P0087575 Tspan32 protein_coding protein_coding MGP_LPJ_T0087576.1 MGP_LPJ_G0033183.1 mouse_genomes_project 7 149805186 149819252 + MGP_LPJ_P0087576 Tspan32 protein_coding protein_coding MGP_LPJ_T0087577.1 MGP_LPJ_G0033183.1 mouse_genomes_project 7 149805186 149819252 + MGP_LPJ_P0087577 Tspan32 protein_coding protein_coding MGP_LPJ_T0087578.1 MGP_LPJ_G0033183.1 mouse_genomes_project 7 149805415 149817439 + MGP_LPJ_P0087578 Tspan32 protein_coding protein_coding MGP_LPJ_T0087579.1 MGP_LPJ_G0033183.1 mouse_genomes_project 7 149817174 149818669 + Tspan32 protein_coding retained_intron MGP_LPJ_T0085598.1 MGP_LPJ_G0032759.1 mouse_genomes_project 7 114477922 114481187 + MGP_LPJ_P0085598 Rpl27a protein_coding protein_coding MGP_LPJ_T0085599.1 MGP_LPJ_G0032759.1 mouse_genomes_project 7 114477971 114479973 + Rpl27a protein_coding retained_intron MGP_LPJ_T0085600.1 MGP_LPJ_G0032759.1 mouse_genomes_project 7 114477974 114478955 + Rpl27a protein_coding retained_intron MGP_LPJ_T0085601.1 MGP_LPJ_G0032759.1 mouse_genomes_project 7 114477988 114480586 + Rpl27a protein_coding retained_intron MGP_LPJ_T0085602.1 MGP_LPJ_G0032759.1 mouse_genomes_project 7 114477995 114479373 + MGP_LPJ_P0085602 Rpl27a protein_coding nonsense_mediated_decay MGP_LPJ_T0085603.1 MGP_LPJ_G0032759.1 mouse_genomes_project 7 114478045 114478714 + Rpl27a protein_coding retained_intron MGP_LPJ_T0081474.1 MGP_LPJ_G0031591.1 mouse_genomes_project 7 13739662 13745334 - MGP_LPJ_P0081474 Obox6 protein_coding protein_coding MGP_LPJ_T0084400.1 MGP_LPJ_G0032317.1 mouse_genomes_project 7 83536546 83552521 - MGP_LPJ_P0084400 Unc45a protein_coding protein_coding MGP_LPJ_T0084401.1 MGP_LPJ_G0032317.1 mouse_genomes_project 7 83536549 83551744 - MGP_LPJ_P0084401 Unc45a protein_coding protein_coding MGP_LPJ_T0084402.1 MGP_LPJ_G0032317.1 mouse_genomes_project 7 83536550 83551696 - MGP_LPJ_P0084402 Unc45a protein_coding nonsense_mediated_decay MGP_LPJ_T0084403.1 MGP_LPJ_G0032317.1 mouse_genomes_project 7 83536580 83551287 - MGP_LPJ_P0084403 Unc45a protein_coding protein_coding MGP_LPJ_T0084404.1 MGP_LPJ_G0032317.1 mouse_genomes_project 7 83545531 83551731 - MGP_LPJ_P0084404 Unc45a protein_coding protein_coding MGP_LPJ_T0084405.1 MGP_LPJ_G0032317.1 mouse_genomes_project 7 83549995 83551726 - Unc45a protein_coding retained_intron MGP_LPJ_T0084406.1 MGP_LPJ_G0032317.1 mouse_genomes_project 7 83550545 83551673 - Unc45a protein_coding retained_intron MGP_LPJ_T0084407.1 MGP_LPJ_G0032317.1 mouse_genomes_project 7 83550833 83551742 - MGP_LPJ_P0084407 Unc45a protein_coding protein_coding MGP_LPJ_T0084408.1 MGP_LPJ_G0032317.1 mouse_genomes_project 7 83550837 83551744 - Unc45a protein_coding processed_transcript MGP_LPJ_T0084409.1 MGP_LPJ_G0032317.1 mouse_genomes_project 7 83551228 83551736 - Unc45a protein_coding retained_intron MGP_LPJ_T0083476.1 MGP_LPJ_G0032107.1 mouse_genomes_project 7 46038919 46040921 - MGP_LPJ_P0083476 Rps11 protein_coding protein_coding MGP_LPJ_T0081632.1 MGP_LPJ_G0031635.1 mouse_genomes_project 7 16027772 16034230 + MGP_LPJ_P0081632 Ceacam11 protein_coding protein_coding MGP_LPJ_T0085404.1 MGP_LPJ_G0032668.1 mouse_genomes_project 7 110212781 110238275 - MGP_LPJ_P0085404 Apbb1 protein_coding protein_coding MGP_LPJ_T0085405.1 MGP_LPJ_G0032668.1 mouse_genomes_project 7 110212782 110225302 - MGP_LPJ_P0085405 Apbb1 protein_coding protein_coding MGP_LPJ_T0085406.1 MGP_LPJ_G0032668.1 mouse_genomes_project 7 110212782 110225822 - MGP_LPJ_P0085406 Apbb1 protein_coding protein_coding MGP_LPJ_T0085407.1 MGP_LPJ_G0032668.1 mouse_genomes_project 7 110212782 110226038 - MGP_LPJ_P0085407 Apbb1 protein_coding protein_coding MGP_LPJ_T0085408.1 MGP_LPJ_G0032668.1 mouse_genomes_project 7 110212782 110237900 - MGP_LPJ_P0085408 Apbb1 protein_coding protein_coding MGP_LPJ_T0085409.1 MGP_LPJ_G0032668.1 mouse_genomes_project 7 110212784 110237859 - MGP_LPJ_P0085409 Apbb1 protein_coding protein_coding MGP_LPJ_T0085410.1 MGP_LPJ_G0032668.1 mouse_genomes_project 7 110212785 110225481 - Apbb1 protein_coding retained_intron MGP_LPJ_T0085411.1 MGP_LPJ_G0032668.1 mouse_genomes_project 7 110212801 110238113 - MGP_LPJ_P0085411 Apbb1 protein_coding protein_coding MGP_LPJ_T0085412.1 MGP_LPJ_G0032668.1 mouse_genomes_project 7 110212821 110225817 - MGP_LPJ_P0085412 Apbb1 protein_coding protein_coding MGP_LPJ_T0085413.1 MGP_LPJ_G0032668.1 mouse_genomes_project 7 110213116 110225302 - MGP_LPJ_P0085413 Apbb1 protein_coding protein_coding MGP_LPJ_T0085414.1 MGP_LPJ_G0032668.1 mouse_genomes_project 7 110213459 110222030 - Apbb1 protein_coding retained_intron MGP_LPJ_T0085415.1 MGP_LPJ_G0032668.1 mouse_genomes_project 7 110213766 110223819 - Apbb1 protein_coding retained_intron MGP_LPJ_T0085416.1 MGP_LPJ_G0032668.1 mouse_genomes_project 7 110222114 110237814 - MGP_LPJ_P0085416 Apbb1 protein_coding protein_coding MGP_LPJ_T0085417.1 MGP_LPJ_G0032668.1 mouse_genomes_project 7 110222631 110225488 - MGP_LPJ_P0085417 Apbb1 protein_coding protein_coding MGP_LPJ_T0085418.1 MGP_LPJ_G0032668.1 mouse_genomes_project 7 110223074 110225790 - MGP_LPJ_P0085418 Apbb1 protein_coding protein_coding MGP_LPJ_T0085419.1 MGP_LPJ_G0032668.1 mouse_genomes_project 7 110223189 110225798 - MGP_LPJ_P0085419 Apbb1 protein_coding protein_coding MGP_LPJ_T0085420.1 MGP_LPJ_G0032668.1 mouse_genomes_project 7 110223618 110226117 - MGP_LPJ_P0085420 Apbb1 protein_coding protein_coding MGP_LPJ_T0085421.1 MGP_LPJ_G0032668.1 mouse_genomes_project 7 110223692 110225195 - Apbb1 protein_coding retained_intron MGP_LPJ_T0085422.1 MGP_LPJ_G0032668.1 mouse_genomes_project 7 110230341 110237810 - MGP_LPJ_P0085422 Apbb1 protein_coding protein_coding MGP_LPJ_T0100992.1 MGP_LPJ_G0039255.1 mouse_genomes_project 7 120018979 120019111 - Gm24982 snoRNA snoRNA MGP_LPJ_T0015800.1 MGP_LPJ_G0013891.1 mouse_genomes_project 7 84740107 84740884 + processed_pseudogene processed_pseudogene MGP_LPJ_T0084033.1 MGP_LPJ_G0032249.1 mouse_genomes_project 7 68069183 68110958 + Tarsl2 protein_coding retained_intron MGP_LPJ_T0084034.1 MGP_LPJ_G0032249.1 mouse_genomes_project 7 68069183 68120591 + MGP_LPJ_P0084034 Tarsl2 protein_coding protein_coding MGP_LPJ_T0084035.1 MGP_LPJ_G0032249.1 mouse_genomes_project 7 68084674 68087367 + Tarsl2 protein_coding retained_intron MGP_LPJ_T0084036.1 MGP_LPJ_G0032249.1 mouse_genomes_project 7 68105211 68118582 + Tarsl2 protein_coding processed_transcript MGP_LPJ_T0084854.1 MGP_LPJ_G0032443.1 mouse_genomes_project 7 102188818 102190962 - MGP_LPJ_P0084854 Omp protein_coding protein_coding MGP_LPJ_T0082594.1 MGP_LPJ_G0031901.1 mouse_genomes_project 7 29368507 29382522 - MGP_LPJ_P0082594 Zfp566 protein_coding protein_coding MGP_LPJ_T0082595.1 MGP_LPJ_G0031901.1 mouse_genomes_project 7 29371649 29382458 - Zfp566 protein_coding retained_intron MGP_LPJ_T0099739.1 MGP_LPJ_G0038002.1 mouse_genomes_project 7 129541092 129541198 - Gm23788 snRNA snRNA MGP_LPJ_T0015645.1 MGP_LPJ_G0013736.1 mouse_genomes_project 7 1372831 1373009 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099716.1 MGP_LPJ_G0037979.1 mouse_genomes_project 7 80929696 80929877 - Gm23239 snRNA snRNA MGP_LPJ_T0086935.1 MGP_LPJ_G0033030.1 mouse_genomes_project 7 138820779 138845039 + Lhpp protein_coding processed_transcript MGP_LPJ_T0086936.1 MGP_LPJ_G0033030.1 mouse_genomes_project 7 138820780 138926770 + MGP_LPJ_P0086936 Lhpp protein_coding protein_coding MGP_LPJ_T0086937.1 MGP_LPJ_G0033030.1 mouse_genomes_project 7 138820808 138889491 + Lhpp protein_coding processed_transcript MGP_LPJ_T0086938.1 MGP_LPJ_G0033030.1 mouse_genomes_project 7 138820849 138926127 + Lhpp protein_coding processed_transcript MGP_LPJ_T0086939.1 MGP_LPJ_G0033030.1 mouse_genomes_project 7 138844783 138856025 + Lhpp protein_coding retained_intron MGP_LPJ_T0011698.1 MGP_LPJ_G0009816.1 mouse_genomes_project 7 45067802 45068090 + Gm25386 misc_RNA misc_RNA MGP_LPJ_T0086888.1 MGP_LPJ_G0033012.1 mouse_genomes_project 7 136971918 137018776 + Htra1 protein_coding retained_intron MGP_LPJ_T0086889.1 MGP_LPJ_G0033012.1 mouse_genomes_project 7 136972010 137024502 + MGP_LPJ_P0086889 Htra1 protein_coding protein_coding MGP_LPJ_T0086890.1 MGP_LPJ_G0033012.1 mouse_genomes_project 7 136980468 137024502 + Htra1 protein_coding processed_transcript MGP_LPJ_T0086891.1 MGP_LPJ_G0033012.1 mouse_genomes_project 7 137020511 137021285 + Htra1 protein_coding retained_intron MGP_LPJ_T0086892.1 MGP_LPJ_G0033012.1 mouse_genomes_project 7 137021571 137024238 + Htra1 protein_coding processed_transcript MGP_LPJ_T0087183.1 MGP_LPJ_G0033101.1 mouse_genomes_project 7 147272796 147296933 + MGP_LPJ_P0087183 Olfr53 protein_coding protein_coding MGP_LPJ_T0084362.1 MGP_LPJ_G0032312.1 mouse_genomes_project 7 83449257 83465932 + MGP_LPJ_P0084362 Ttll13 protein_coding protein_coding MGP_LPJ_T0084363.1 MGP_LPJ_G0032312.1 mouse_genomes_project 7 83449306 83449686 + Ttll13 protein_coding retained_intron MGP_LPJ_T0084364.1 MGP_LPJ_G0032312.1 mouse_genomes_project 7 83449436 83464307 + Ttll13 protein_coding retained_intron MGP_LPJ_T0084365.1 MGP_LPJ_G0032312.1 mouse_genomes_project 7 83449875 83458017 + Ttll13 protein_coding retained_intron MGP_LPJ_T0084366.1 MGP_LPJ_G0032312.1 mouse_genomes_project 7 83450269 83465781 + MGP_LPJ_P0084366 Ttll13 protein_coding protein_coding MGP_LPJ_T0018314.1 MGP_LPJ_G0015586.1 mouse_genomes_project 7 50448958 50456967 + processed_transcript processed_transcript MGP_LPJ_T0018315.1 MGP_LPJ_G0015586.1 mouse_genomes_project 7 50452314 50457613 + processed_transcript processed_transcript MGP_LPJ_T0005185.1 MGP_LPJ_G0004415.1 mouse_genomes_project 7 18069470 18076211 + Gm20512 antisense antisense MGP_LPJ_T0008960.1 MGP_LPJ_G0007230.1 mouse_genomes_project 7 82732136 82737730 - Gm45169 lincRNA lincRNA MGP_LPJ_T0082564.1 MGP_LPJ_G0031892.1 mouse_genomes_project 7 29134148 29150176 + MGP_LPJ_P0082564 Zfp420 protein_coding protein_coding MGP_LPJ_T0082565.1 MGP_LPJ_G0031892.1 mouse_genomes_project 7 29134173 29135777 + Zfp420 protein_coding retained_intron MGP_LPJ_T0082566.1 MGP_LPJ_G0031892.1 mouse_genomes_project 7 29134180 29150957 + Zfp420 protein_coding processed_transcript MGP_LPJ_T0082567.1 MGP_LPJ_G0031892.1 mouse_genomes_project 7 29134210 29150498 + MGP_LPJ_P0082567 Zfp420 protein_coding protein_coding MGP_LPJ_T0082568.1 MGP_LPJ_G0031892.1 mouse_genomes_project 7 29146213 29148207 + Zfp420 protein_coding retained_intron MGP_LPJ_T0085507.1 MGP_LPJ_G0032691.1 mouse_genomes_project 7 111831183 111832131 + MGP_LPJ_P0085507 Olfr704 protein_coding protein_coding MGP_LPJ_T0010888.1 MGP_LPJ_G0009006.1 mouse_genomes_project 7 45913217 45913279 - Mir7054 miRNA miRNA MGP_LPJ_T0086382.1 MGP_LPJ_G0032919.1 mouse_genomes_project 7 132601449 132602478 - MGP_LPJ_P0086382 4930451I11Rik protein_coding protein_coding MGP_LPJ_T0086383.1 MGP_LPJ_G0032919.1 mouse_genomes_project 7 132601450 132602621 - 4930451I11Rik protein_coding processed_transcript MGP_LPJ_T0086384.1 MGP_LPJ_G0032919.1 mouse_genomes_project 7 132601458 132602454 - MGP_LPJ_P0086384 4930451I11Rik protein_coding protein_coding MGP_LPJ_T0102455.1 MGP_LPJ_G0040491.1 mouse_genomes_project 7 108758976 108759972 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008976.1 MGP_LPJ_G0007237.1 mouse_genomes_project 7 91904203 91908809 - Gm26522 lincRNA lincRNA MGP_LPJ_T0015675.1 MGP_LPJ_G0013766.1 mouse_genomes_project 7 14672862 14673415 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005202.1 MGP_LPJ_G0004429.1 mouse_genomes_project 7 27009215 27012196 + Gm26891 antisense antisense MGP_LPJ_T0081463.1 MGP_LPJ_G0031585.1 mouse_genomes_project 7 12002579 12043458 - MGP_LPJ_P0081463 Sult2a8 protein_coding protein_coding MGP_LPJ_T0081464.1 MGP_LPJ_G0031585.1 mouse_genomes_project 7 12002582 12050337 - MGP_LPJ_P0081464 Sult2a8 protein_coding protein_coding MGP_LPJ_T0081465.1 MGP_LPJ_G0031585.1 mouse_genomes_project 7 12008020 12050520 - MGP_LPJ_P0081465 Sult2a8 protein_coding protein_coding MGP_LPJ_T0005315.1 MGP_LPJ_G0004508.1 mouse_genomes_project 7 131255949 131257291 - Gm44876 antisense antisense MGP_LPJ_T0087201.1 MGP_LPJ_G0033112.1 mouse_genomes_project 7 147492497 147500704 + MGP_LPJ_P0087201 Ric8a protein_coding protein_coding MGP_LPJ_T0087202.1 MGP_LPJ_G0033112.1 mouse_genomes_project 7 147494288 147495316 + Ric8a protein_coding retained_intron MGP_LPJ_T0087203.1 MGP_LPJ_G0033112.1 mouse_genomes_project 7 147494395 147495532 + Ric8a protein_coding processed_transcript MGP_LPJ_T0087204.1 MGP_LPJ_G0033112.1 mouse_genomes_project 7 147494415 147495516 + Ric8a protein_coding processed_transcript MGP_LPJ_T0087205.1 MGP_LPJ_G0033112.1 mouse_genomes_project 7 147494672 147499933 + Ric8a protein_coding retained_intron MGP_LPJ_T0087206.1 MGP_LPJ_G0033112.1 mouse_genomes_project 7 147495135 147496708 + Ric8a protein_coding processed_transcript MGP_LPJ_T0087207.1 MGP_LPJ_G0033112.1 mouse_genomes_project 7 147497615 147500117 + Ric8a protein_coding retained_intron MGP_LPJ_T0087208.1 MGP_LPJ_G0033112.1 mouse_genomes_project 7 147498146 147499593 + Ric8a protein_coding retained_intron MGP_LPJ_T0102441.1 MGP_LPJ_G0040477.1 mouse_genomes_project 7 107554261 107555209 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0081635.1 MGP_LPJ_G0031637.1 mouse_genomes_project 7 16135147 16141033 + MGP_LPJ_P0081635 Ceacam12 protein_coding protein_coding MGP_LPJ_T0081636.1 MGP_LPJ_G0031637.1 mouse_genomes_project 7 16135157 16147239 + MGP_LPJ_P0081636 Ceacam12 protein_coding protein_coding MGP_LPJ_T0081637.1 MGP_LPJ_G0031637.1 mouse_genomes_project 7 16135209 16139647 + MGP_LPJ_P0081637 Ceacam12 protein_coding protein_coding MGP_LPJ_T0085310.1 MGP_LPJ_G0032611.1 mouse_genomes_project 7 108638626 108639574 - MGP_LPJ_P0085310 Olfr645 protein_coding protein_coding MGP_LPJ_T0085221.1 MGP_LPJ_G0032529.1 mouse_genomes_project 7 107049521 107050544 + MGP_LPJ_P0085221 Olfr556 protein_coding protein_coding MGP_LPJ_T0008897.1 MGP_LPJ_G0007186.1 mouse_genomes_project 7 67623335 67623891 - Gm45214 lincRNA lincRNA MGP_LPJ_T0008898.1 MGP_LPJ_G0007186.1 mouse_genomes_project 7 67623338 67623951 - Gm45214 lincRNA lincRNA MGP_LPJ_T0098675.1 MGP_LPJ_G0036944.1 mouse_genomes_project 7 151357676 151358137 - Gm14376 sense_intronic sense_intronic MGP_LPJ_T0082304.1 MGP_LPJ_G0031822.1 mouse_genomes_project 7 26675687 26679119 + MGP_LPJ_P0082304 Ttc9b protein_coding protein_coding MGP_LPJ_T0083032.1 MGP_LPJ_G0031988.1 mouse_genomes_project 7 35111538 35116217 - MGP_LPJ_P0083032 Faap24 protein_coding protein_coding MGP_LPJ_T0083033.1 MGP_LPJ_G0031988.1 mouse_genomes_project 7 35111691 35116094 - Faap24 protein_coding retained_intron MGP_LPJ_T0083034.1 MGP_LPJ_G0031988.1 mouse_genomes_project 7 35112082 35116089 - MGP_LPJ_P0083034 Faap24 protein_coding protein_coding MGP_LPJ_T0015806.1 MGP_LPJ_G0013897.1 mouse_genomes_project 7 90472568 90473507 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098387.1 MGP_LPJ_G0036668.1 mouse_genomes_project 7 3962105 3962199 + Gm27675 sRNA sRNA MGP_LPJ_T0081769.1 MGP_LPJ_G0031678.1 mouse_genomes_project 7 17717432 17726681 - MGP_LPJ_P0081769 Klc3 protein_coding protein_coding MGP_LPJ_T0081770.1 MGP_LPJ_G0031678.1 mouse_genomes_project 7 17717435 17722489 - MGP_LPJ_P0081770 Klc3 protein_coding protein_coding MGP_LPJ_T0081771.1 MGP_LPJ_G0031678.1 mouse_genomes_project 7 17717435 17722446 - MGP_LPJ_P0081771 Klc3 protein_coding protein_coding MGP_LPJ_T0081772.1 MGP_LPJ_G0031678.1 mouse_genomes_project 7 17717496 17718978 - Klc3 protein_coding retained_intron MGP_LPJ_T0081773.1 MGP_LPJ_G0031678.1 mouse_genomes_project 7 17717559 17722116 - MGP_LPJ_P0081773 Klc3 protein_coding protein_coding MGP_LPJ_T0081774.1 MGP_LPJ_G0031678.1 mouse_genomes_project 7 17718349 17719572 - Klc3 protein_coding retained_intron MGP_LPJ_T0102288.1 MGP_LPJ_G0040325.1 mouse_genomes_project 7 1210605 1211443 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0100988.1 MGP_LPJ_G0039251.1 mouse_genomes_project 7 115016226 115016359 + Gm25636 snoRNA snoRNA MGP_LPJ_T0010855.1 MGP_LPJ_G0008973.1 mouse_genomes_project 7 4036442 4036526 + Mir3099 miRNA miRNA MGP_LPJ_T0099735.1 MGP_LPJ_G0037998.1 mouse_genomes_project 7 125371114 125371215 + Gm25217 snRNA snRNA MGP_LPJ_T0083386.1 MGP_LPJ_G0032081.1 mouse_genomes_project 7 45545573 45546844 + MGP_LPJ_P0083386 protein_coding protein_coding MGP_LPJ_T0081468.1 MGP_LPJ_G0031587.1 mouse_genomes_project 7 12209600 12212038 - MGP_LPJ_P0081468 Vmn1r90 protein_coding protein_coding MGP_LPJ_T0086624.1 MGP_LPJ_G0032966.1 mouse_genomes_project 7 133560598 133566055 + MGP_LPJ_P0086624 Ctf1 protein_coding protein_coding MGP_LPJ_T0086625.1 MGP_LPJ_G0032966.1 mouse_genomes_project 7 133560799 133565193 + MGP_LPJ_P0086625 Ctf1 protein_coding protein_coding MGP_LPJ_T0086626.1 MGP_LPJ_G0032966.1 mouse_genomes_project 7 133560806 133565453 + MGP_LPJ_P0086626 Ctf1 protein_coding protein_coding MGP_LPJ_T0086627.1 MGP_LPJ_G0032966.1 mouse_genomes_project 7 133561162 133564889 + Ctf1 protein_coding processed_transcript MGP_LPJ_T0086628.1 MGP_LPJ_G0032966.1 mouse_genomes_project 7 133561419 133564902 + Ctf1 protein_coding processed_transcript MGP_LPJ_T0008961.1 MGP_LPJ_G0007231.1 mouse_genomes_project 7 83348331 83349934 + Gm45202 lincRNA lincRNA MGP_LPJ_T0085062.1 MGP_LPJ_G0032492.1 mouse_genomes_project 7 105641542 105710914 + MGP_LPJ_P0085062 Arap1 protein_coding protein_coding MGP_LPJ_T0085063.1 MGP_LPJ_G0032492.1 mouse_genomes_project 7 105641631 105710341 + MGP_LPJ_P0085063 Arap1 protein_coding protein_coding MGP_LPJ_T0085064.1 MGP_LPJ_G0032492.1 mouse_genomes_project 7 105655479 105668216 + MGP_LPJ_P0085064 Arap1 protein_coding protein_coding MGP_LPJ_T0085065.1 MGP_LPJ_G0032492.1 mouse_genomes_project 7 105655694 105668090 + MGP_LPJ_P0085065 Arap1 protein_coding protein_coding MGP_LPJ_T0085066.1 MGP_LPJ_G0032492.1 mouse_genomes_project 7 105656220 105668225 + MGP_LPJ_P0085066 Arap1 protein_coding protein_coding MGP_LPJ_T0085067.1 MGP_LPJ_G0032492.1 mouse_genomes_project 7 105668053 105710908 + MGP_LPJ_P0085067 Arap1 protein_coding protein_coding MGP_LPJ_T0085068.1 MGP_LPJ_G0032492.1 mouse_genomes_project 7 105673269 105710764 + MGP_LPJ_P0085068 Arap1 protein_coding protein_coding MGP_LPJ_T0085069.1 MGP_LPJ_G0032492.1 mouse_genomes_project 7 105673448 105685295 + MGP_LPJ_P0085069 Arap1 protein_coding protein_coding MGP_LPJ_T0085070.1 MGP_LPJ_G0032492.1 mouse_genomes_project 7 105680100 105682867 + Arap1 protein_coding processed_transcript MGP_LPJ_T0085071.1 MGP_LPJ_G0032492.1 mouse_genomes_project 7 105681293 105684965 + MGP_LPJ_P0085071 Arap1 protein_coding protein_coding MGP_LPJ_T0085072.1 MGP_LPJ_G0032492.1 mouse_genomes_project 7 105682670 105685213 + MGP_LPJ_P0085072 Arap1 protein_coding protein_coding MGP_LPJ_T0085073.1 MGP_LPJ_G0032492.1 mouse_genomes_project 7 105682675 105685605 + MGP_LPJ_P0085073 Arap1 protein_coding protein_coding MGP_LPJ_T0085074.1 MGP_LPJ_G0032492.1 mouse_genomes_project 7 105693111 105711607 + MGP_LPJ_P0085074 Arap1 protein_coding protein_coding MGP_LPJ_T0085075.1 MGP_LPJ_G0032492.1 mouse_genomes_project 7 105693131 105711607 + MGP_LPJ_P0085075 Arap1 protein_coding protein_coding MGP_LPJ_T0085076.1 MGP_LPJ_G0032492.1 mouse_genomes_project 7 105693398 105694875 + Arap1 protein_coding retained_intron MGP_LPJ_T0085077.1 MGP_LPJ_G0032492.1 mouse_genomes_project 7 105694592 105697102 + Arap1 protein_coding processed_transcript MGP_LPJ_T0085078.1 MGP_LPJ_G0032492.1 mouse_genomes_project 7 105697087 105698291 + Arap1 protein_coding processed_transcript MGP_LPJ_T0085079.1 MGP_LPJ_G0032492.1 mouse_genomes_project 7 105700542 105708063 + Arap1 protein_coding retained_intron MGP_LPJ_T0085080.1 MGP_LPJ_G0032492.1 mouse_genomes_project 7 105706630 105710699 + Arap1 protein_coding retained_intron MGP_LPJ_T0082606.1 MGP_LPJ_G0031904.1 mouse_genomes_project 7 29455198 29466458 - MGP_LPJ_P0082606 Zfp146 protein_coding protein_coding MGP_LPJ_T0082607.1 MGP_LPJ_G0031904.1 mouse_genomes_project 7 29456649 29457289 - Zfp146 protein_coding processed_transcript MGP_LPJ_T0086730.1 MGP_LPJ_G0032987.1 mouse_genomes_project 7 133934813 133996034 + MGP_LPJ_P0086730 protein_coding protein_coding MGP_LPJ_T0086731.1 MGP_LPJ_G0032987.1 mouse_genomes_project 7 133934842 133996033 + MGP_LPJ_P0086731 protein_coding protein_coding MGP_LPJ_T0086732.1 MGP_LPJ_G0032987.1 mouse_genomes_project 7 133934852 133994632 + MGP_LPJ_P0086732 protein_coding protein_coding MGP_LPJ_T0086734.1 MGP_LPJ_G0032987.1 mouse_genomes_project 7 133934856 133995091 + MGP_LPJ_P0086734 protein_coding protein_coding MGP_LPJ_T0086735.1 MGP_LPJ_G0032987.1 mouse_genomes_project 7 133934901 133944069 + protein_coding processed_transcript MGP_LPJ_T0086736.1 MGP_LPJ_G0032987.1 mouse_genomes_project 7 133934916 133944311 + MGP_LPJ_P0086736 protein_coding nonsense_mediated_decay MGP_LPJ_T0081728.1 MGP_LPJ_G0031669.1 mouse_genomes_project 7 17536610 17556410 + MGP_LPJ_P0081728 Opa3 protein_coding protein_coding MGP_LPJ_T0081729.1 MGP_LPJ_G0031669.1 mouse_genomes_project 7 17536659 17537386 + Opa3 protein_coding retained_intron MGP_LPJ_T0081730.1 MGP_LPJ_G0031669.1 mouse_genomes_project 7 17536659 17566423 + MGP_LPJ_P0081730 Opa3 protein_coding protein_coding MGP_LPJ_T0084871.1 MGP_LPJ_G0032447.1 mouse_genomes_project 7 102499566 102538096 + MGP_LPJ_P0084871 Gucy2d protein_coding protein_coding MGP_LPJ_T0084872.1 MGP_LPJ_G0032447.1 mouse_genomes_project 7 102502579 102538095 + MGP_LPJ_P0084872 Gucy2d protein_coding protein_coding MGP_LPJ_T0084873.1 MGP_LPJ_G0032447.1 mouse_genomes_project 7 102528333 102535822 + MGP_LPJ_P0084873 Gucy2d protein_coding protein_coding MGP_LPJ_T0084874.1 MGP_LPJ_G0032447.1 mouse_genomes_project 7 102532168 102538095 + Gucy2d protein_coding processed_transcript MGP_LPJ_T0015721.1 MGP_LPJ_G0013812.1 mouse_genomes_project 7 35222973 35225236 - processed_pseudogene processed_pseudogene MGP_LPJ_T0082997.1 MGP_LPJ_G0031980.1 mouse_genomes_project 7 34330755 34483087 - MGP_LPJ_P0082997 Chst8 protein_coding protein_coding MGP_LPJ_T0082998.1 MGP_LPJ_G0031980.1 mouse_genomes_project 7 34330755 34483087 - MGP_LPJ_P0082998 Chst8 protein_coding protein_coding MGP_LPJ_T0082999.1 MGP_LPJ_G0031980.1 mouse_genomes_project 7 34331043 34483087 - MGP_LPJ_P0082999 Chst8 protein_coding protein_coding MGP_LPJ_T0083000.1 MGP_LPJ_G0031980.1 mouse_genomes_project 7 34332103 34483112 - Chst8 protein_coding processed_transcript MGP_LPJ_T0083001.1 MGP_LPJ_G0031980.1 mouse_genomes_project 7 34350958 34354119 - Chst8 protein_coding processed_transcript MGP_LPJ_T0083002.1 MGP_LPJ_G0031980.1 mouse_genomes_project 7 34351760 34483073 - Chst8 protein_coding processed_transcript MGP_LPJ_T0081958.1 MGP_LPJ_G0031738.1 mouse_genomes_project 7 23275876 23279490 - MGP_LPJ_P0081958 Zfp575 protein_coding protein_coding MGP_LPJ_T0086748.1 MGP_LPJ_G0032992.1 mouse_genomes_project 7 134121913 134125482 - MGP_LPJ_P0086748 9130023H24Rik protein_coding protein_coding MGP_LPJ_T0082090.1 MGP_LPJ_G0031772.1 mouse_genomes_project 7 24397958 24399231 - MGP_LPJ_P0082090 Erich4 protein_coding protein_coding MGP_LPJ_T0081319.1 MGP_LPJ_G0031522.1 mouse_genomes_project 7 4398261 4410476 + MGP_LPJ_P0081319 Zfp418 protein_coding protein_coding MGP_LPJ_T0005238.1 MGP_LPJ_G0004455.1 mouse_genomes_project 7 45358039 45360608 + Gm44646 antisense antisense MGP_LPJ_T0085402.1 MGP_LPJ_G0032666.1 mouse_genomes_project 7 110131145 110132736 - MGP_LPJ_P0085402 Prkcdbp protein_coding protein_coding MGP_LPJ_T0002277.1 MGP_LPJ_G0002186.1 mouse_genomes_project 7 76240551 76242593 - TEC TEC MGP_LPJ_T0082231.1 MGP_LPJ_G0031809.1 mouse_genomes_project 7 26273240 26308202 - MGP_LPJ_P0082231 Ltbp4 protein_coding protein_coding MGP_LPJ_T0082232.1 MGP_LPJ_G0031809.1 mouse_genomes_project 7 26273244 26304188 - MGP_LPJ_P0082232 Ltbp4 protein_coding protein_coding MGP_LPJ_T0082233.1 MGP_LPJ_G0031809.1 mouse_genomes_project 7 26273246 26308202 - MGP_LPJ_P0082233 Ltbp4 protein_coding protein_coding MGP_LPJ_T0082234.1 MGP_LPJ_G0031809.1 mouse_genomes_project 7 26274102 26304138 - MGP_LPJ_P0082234 Ltbp4 protein_coding protein_coding MGP_LPJ_T0082235.1 MGP_LPJ_G0031809.1 mouse_genomes_project 7 26274183 26275075 - Ltbp4 protein_coding retained_intron MGP_LPJ_T0082236.1 MGP_LPJ_G0031809.1 mouse_genomes_project 7 26274727 26279444 - MGP_LPJ_P0082236 Ltbp4 protein_coding protein_coding MGP_LPJ_T0082237.1 MGP_LPJ_G0031809.1 mouse_genomes_project 7 26275664 26279463 - Ltbp4 protein_coding retained_intron MGP_LPJ_T0082238.1 MGP_LPJ_G0031809.1 mouse_genomes_project 7 26277746 26279247 - Ltbp4 protein_coding retained_intron MGP_LPJ_T0082239.1 MGP_LPJ_G0031809.1 mouse_genomes_project 7 26280344 26304173 - Ltbp4 protein_coding processed_transcript MGP_LPJ_T0010850.1 MGP_LPJ_G0008968.1 mouse_genomes_project 7 100884 100953 + Mir295 miRNA miRNA MGP_LPJ_T0082636.1 MGP_LPJ_G0031913.1 mouse_genomes_project 7 29596406 29614309 + MGP_LPJ_P0082636 Clip3 protein_coding protein_coding MGP_LPJ_T0082637.1 MGP_LPJ_G0031913.1 mouse_genomes_project 7 29596462 29597407 + Clip3 protein_coding retained_intron MGP_LPJ_T0082638.1 MGP_LPJ_G0031913.1 mouse_genomes_project 7 29596463 29603976 + MGP_LPJ_P0082638 Clip3 protein_coding protein_coding MGP_LPJ_T0082639.1 MGP_LPJ_G0031913.1 mouse_genomes_project 7 29596473 29603732 + MGP_LPJ_P0082639 Clip3 protein_coding protein_coding MGP_LPJ_T0082640.1 MGP_LPJ_G0031913.1 mouse_genomes_project 7 29596692 29603743 + MGP_LPJ_P0082640 Clip3 protein_coding protein_coding MGP_LPJ_T0082641.1 MGP_LPJ_G0031913.1 mouse_genomes_project 7 29603925 29605979 + Clip3 protein_coding processed_transcript MGP_LPJ_T0082642.1 MGP_LPJ_G0031913.1 mouse_genomes_project 7 29610697 29613245 + Clip3 protein_coding processed_transcript MGP_LPJ_T0086222.1 MGP_LPJ_G0032895.1 mouse_genomes_project 7 132146676 132153060 - Cd19 protein_coding retained_intron MGP_LPJ_T0086223.1 MGP_LPJ_G0032895.1 mouse_genomes_project 7 132146677 132153081 - MGP_LPJ_P0086223 Cd19 protein_coding protein_coding MGP_LPJ_T0086224.1 MGP_LPJ_G0032895.1 mouse_genomes_project 7 132146677 132153064 - MGP_LPJ_P0086224 Cd19 protein_coding protein_coding MGP_LPJ_T0086225.1 MGP_LPJ_G0032895.1 mouse_genomes_project 7 132147588 132148023 - Cd19 protein_coding retained_intron MGP_LPJ_T0086226.1 MGP_LPJ_G0032895.1 mouse_genomes_project 7 132151857 132152746 - Cd19 protein_coding retained_intron MGP_LPJ_T0086262.1 MGP_LPJ_G0032903.1 mouse_genomes_project 7 132319434 132333892 - MGP_LPJ_P0086262 Cln3 protein_coding protein_coding MGP_LPJ_T0086263.1 MGP_LPJ_G0032903.1 mouse_genomes_project 7 132319627 132331322 - MGP_LPJ_P0086263 Cln3 protein_coding protein_coding MGP_LPJ_T0086264.1 MGP_LPJ_G0032903.1 mouse_genomes_project 7 132319627 132332355 - MGP_LPJ_P0086264 Cln3 protein_coding protein_coding MGP_LPJ_T0086265.1 MGP_LPJ_G0032903.1 mouse_genomes_project 7 132320313 132331265 - MGP_LPJ_P0086265 Cln3 protein_coding protein_coding MGP_LPJ_T0086266.1 MGP_LPJ_G0032903.1 mouse_genomes_project 7 132320317 132323188 - Cln3 protein_coding processed_transcript MGP_LPJ_T0086267.1 MGP_LPJ_G0032903.1 mouse_genomes_project 7 132320335 132320956 - Cln3 protein_coding processed_transcript MGP_LPJ_T0086268.1 MGP_LPJ_G0032903.1 mouse_genomes_project 7 132320349 132325951 - Cln3 protein_coding retained_intron MGP_LPJ_T0086269.1 MGP_LPJ_G0032903.1 mouse_genomes_project 7 132326446 132332382 - Cln3 protein_coding retained_intron MGP_LPJ_T0086270.1 MGP_LPJ_G0032903.1 mouse_genomes_project 7 132327298 132331301 - Cln3 protein_coding processed_transcript MGP_LPJ_T0086271.1 MGP_LPJ_G0032903.1 mouse_genomes_project 7 132327334 132331437 - MGP_LPJ_P0086271 Cln3 protein_coding nonsense_mediated_decay MGP_LPJ_T0086272.1 MGP_LPJ_G0032903.1 mouse_genomes_project 7 132327350 132332295 - MGP_LPJ_P0086272 Cln3 protein_coding protein_coding MGP_LPJ_T0086273.1 MGP_LPJ_G0032903.1 mouse_genomes_project 7 132327496 132331598 - MGP_LPJ_P0086273 Cln3 protein_coding protein_coding MGP_LPJ_T0086274.1 MGP_LPJ_G0032903.1 mouse_genomes_project 7 132328344 132331189 - Cln3 protein_coding retained_intron MGP_LPJ_T0086275.1 MGP_LPJ_G0032903.1 mouse_genomes_project 7 132328905 132331391 - Cln3 protein_coding retained_intron MGP_LPJ_T0086276.1 MGP_LPJ_G0032903.1 mouse_genomes_project 7 132329587 132331417 - Cln3 protein_coding processed_transcript MGP_LPJ_T0086277.1 MGP_LPJ_G0032903.1 mouse_genomes_project 7 132329732 132331641 - MGP_LPJ_P0086277 Cln3 protein_coding protein_coding MGP_LPJ_T0086278.1 MGP_LPJ_G0032903.1 mouse_genomes_project 7 132329735 132332653 - MGP_LPJ_P0086278 Cln3 protein_coding protein_coding MGP_LPJ_T0086279.1 MGP_LPJ_G0032903.1 mouse_genomes_project 7 132329789 132331629 - MGP_LPJ_P0086279 Cln3 protein_coding protein_coding MGP_LPJ_T0086280.1 MGP_LPJ_G0032903.1 mouse_genomes_project 7 132331396 132332861 - Cln3 protein_coding processed_transcript MGP_LPJ_T0086449.1 MGP_LPJ_G0032929.1 mouse_genomes_project 7 132763451 132797530 - MGP_LPJ_P0086449 Mvp protein_coding protein_coding MGP_LPJ_T0086450.1 MGP_LPJ_G0032929.1 mouse_genomes_project 7 132776887 132792497 - MGP_LPJ_P0086450 Mvp protein_coding protein_coding MGP_LPJ_T0086452.1 MGP_LPJ_G0032929.1 mouse_genomes_project 7 132790360 132797459 - Mvp protein_coding retained_intron MGP_LPJ_T0008981.1 MGP_LPJ_G0007242.1 mouse_genomes_project 7 96870141 96902923 - Gm9934 lincRNA lincRNA MGP_LPJ_T0008982.1 MGP_LPJ_G0007242.1 mouse_genomes_project 7 96889250 96902691 - Gm9934 lincRNA lincRNA MGP_LPJ_T0083858.1 MGP_LPJ_G0032213.1 mouse_genomes_project 7 53575670 53577361 - MGP_LPJ_P0083858 Fancf protein_coding protein_coding MGP_LPJ_T0015871.1 MGP_LPJ_G0013962.1 mouse_genomes_project 7 133220567 133220855 + processed_pseudogene processed_pseudogene MGP_LPJ_T0082334.1 MGP_LPJ_G0031835.1 mouse_genomes_project 7 27210858 27257114 + MGP_LPJ_P0082334 9530053A07Rik protein_coding protein_coding MGP_LPJ_T0082335.1 MGP_LPJ_G0031835.1 mouse_genomes_project 7 27211208 27224847 + 9530053A07Rik protein_coding retained_intron MGP_LPJ_T0082336.1 MGP_LPJ_G0031835.1 mouse_genomes_project 7 27211208 27222456 + 9530053A07Rik protein_coding retained_intron MGP_LPJ_T0082337.1 MGP_LPJ_G0031835.1 mouse_genomes_project 7 27211208 27257098 + MGP_LPJ_P0082337 9530053A07Rik protein_coding protein_coding MGP_LPJ_T0011706.1 MGP_LPJ_G0009824.1 mouse_genomes_project 7 107693689 107694117 + Gm23973 misc_RNA misc_RNA MGP_LPJ_T0082817.1 MGP_LPJ_G0031950.1 mouse_genomes_project 7 30205759 30211959 - MGP_LPJ_P0082817 Ffar1 protein_coding protein_coding MGP_LPJ_T0083874.1 MGP_LPJ_G0032218.1 mouse_genomes_project 7 57629806 57634403 + MGP_LPJ_P0083874 Siglech protein_coding nonsense_mediated_decay MGP_LPJ_T0083875.1 MGP_LPJ_G0032218.1 mouse_genomes_project 7 57629812 57635356 + MGP_LPJ_P0083875 Siglech protein_coding protein_coding MGP_LPJ_T0083876.1 MGP_LPJ_G0032218.1 mouse_genomes_project 7 57629812 57635356 + MGP_LPJ_P0083876 Siglech protein_coding protein_coding MGP_LPJ_T0083877.1 MGP_LPJ_G0032218.1 mouse_genomes_project 7 57629854 57642344 + MGP_LPJ_P0083877 Siglech protein_coding protein_coding MGP_LPJ_T0083878.1 MGP_LPJ_G0032218.1 mouse_genomes_project 7 57629854 57642133 + MGP_LPJ_P0083878 Siglech protein_coding protein_coding MGP_LPJ_T0083879.1 MGP_LPJ_G0032218.1 mouse_genomes_project 7 57629864 57641117 + MGP_LPJ_P0083879 Siglech protein_coding protein_coding MGP_LPJ_T0083880.1 MGP_LPJ_G0032218.1 mouse_genomes_project 7 57629864 57641071 + MGP_LPJ_P0083880 Siglech protein_coding protein_coding MGP_LPJ_T0083881.1 MGP_LPJ_G0032218.1 mouse_genomes_project 7 57629889 57642436 + MGP_LPJ_P0083881 Siglech protein_coding nonsense_mediated_decay MGP_LPJ_T0083621.1 MGP_LPJ_G0032143.1 mouse_genomes_project 7 46647384 46653177 + Mamstr protein_coding retained_intron MGP_LPJ_T0083622.1 MGP_LPJ_G0032143.1 mouse_genomes_project 7 46647384 46648398 + Mamstr protein_coding retained_intron MGP_LPJ_T0083623.1 MGP_LPJ_G0032143.1 mouse_genomes_project 7 46647400 46652619 + MGP_LPJ_P0083623 Mamstr protein_coding protein_coding MGP_LPJ_T0083624.1 MGP_LPJ_G0032143.1 mouse_genomes_project 7 46648887 46653929 + Mamstr protein_coding retained_intron MGP_LPJ_T0083625.1 MGP_LPJ_G0032143.1 mouse_genomes_project 7 46649183 46653149 + Mamstr protein_coding retained_intron MGP_LPJ_T0083626.1 MGP_LPJ_G0032143.1 mouse_genomes_project 7 46651791 46652417 + MGP_LPJ_P0083626 Mamstr protein_coding protein_coding MGP_LPJ_T0085314.1 MGP_LPJ_G0032615.1 mouse_genomes_project 7 108699270 108701568 - MGP_LPJ_P0085314 Ubqlnl protein_coding protein_coding MGP_LPJ_T0015819.1 MGP_LPJ_G0013910.1 mouse_genomes_project 7 101681153 101681631 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002292.1 MGP_LPJ_G0002200.1 mouse_genomes_project 7 79691335 79692917 - TEC TEC MGP_LPJ_T0102380.1 MGP_LPJ_G0040416.1 mouse_genomes_project 7 44892642 44894929 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0086981.1 MGP_LPJ_G0033036.1 mouse_genomes_project 7 139857440 139873191 - MGP_LPJ_P0086981 Tex36 protein_coding protein_coding MGP_LPJ_T0082321.1 MGP_LPJ_G0031830.1 mouse_genomes_project 7 27045743 27057032 - protein_coding retained_intron MGP_LPJ_T0005192.1 MGP_LPJ_G0004422.1 mouse_genomes_project 7 23970721 23972284 + 4933430L12Rik antisense antisense MGP_LPJ_T0002313.1 MGP_LPJ_G0002221.1 mouse_genomes_project 7 104691286 104692238 + TEC TEC MGP_LPJ_T0083675.1 MGP_LPJ_G0032157.1 mouse_genomes_project 7 46854432 46859995 - MGP_LPJ_P0083675 Grwd1 protein_coding protein_coding MGP_LPJ_T0083676.1 MGP_LPJ_G0032157.1 mouse_genomes_project 7 46854435 46859982 - MGP_LPJ_P0083676 Grwd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0083677.1 MGP_LPJ_G0032157.1 mouse_genomes_project 7 46854437 46860150 - MGP_LPJ_P0083677 Grwd1 protein_coding protein_coding MGP_LPJ_T0083678.1 MGP_LPJ_G0032157.1 mouse_genomes_project 7 46855268 46860087 - MGP_LPJ_P0083678 Grwd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0085300.1 MGP_LPJ_G0032601.1 mouse_genomes_project 7 108479597 108480536 + MGP_LPJ_P0085300 Olfr633 protein_coding protein_coding MGP_LPJ_T0083342.1 MGP_LPJ_G0032072.1 mouse_genomes_project 7 45352917 45357491 + MGP_LPJ_P0083342 Fam71e1 protein_coding protein_coding MGP_LPJ_T0083343.1 MGP_LPJ_G0032072.1 mouse_genomes_project 7 45352924 45356688 + Fam71e1 protein_coding retained_intron MGP_LPJ_T0083344.1 MGP_LPJ_G0032072.1 mouse_genomes_project 7 45352935 45353485 + MGP_LPJ_P0083344 Fam71e1 protein_coding protein_coding MGP_LPJ_T0083345.1 MGP_LPJ_G0032072.1 mouse_genomes_project 7 45352994 45357484 + MGP_LPJ_P0083345 Fam71e1 protein_coding protein_coding MGP_LPJ_T0083346.1 MGP_LPJ_G0032072.1 mouse_genomes_project 7 45353004 45357484 + MGP_LPJ_P0083346 Fam71e1 protein_coding nonsense_mediated_decay MGP_LPJ_T0083347.1 MGP_LPJ_G0032072.1 mouse_genomes_project 7 45353008 45357837 + Fam71e1 protein_coding retained_intron MGP_LPJ_T0083348.1 MGP_LPJ_G0032072.1 mouse_genomes_project 7 45353008 45354346 + Fam71e1 protein_coding retained_intron MGP_LPJ_T0083349.1 MGP_LPJ_G0032072.1 mouse_genomes_project 7 45353030 45356717 + Fam71e1 protein_coding retained_intron MGP_LPJ_T0083350.1 MGP_LPJ_G0032072.1 mouse_genomes_project 7 45356775 45357483 + Fam71e1 protein_coding processed_transcript MGP_LPJ_T0086199.1 MGP_LPJ_G0032891.1 mouse_genomes_project 7 131982711 132004937 + MGP_LPJ_P0086199 Sbk1 protein_coding protein_coding MGP_LPJ_T0086200.1 MGP_LPJ_G0032891.1 mouse_genomes_project 7 131983492 131999851 + MGP_LPJ_P0086200 Sbk1 protein_coding protein_coding MGP_LPJ_T0086201.1 MGP_LPJ_G0032891.1 mouse_genomes_project 7 132001000 132002741 + MGP_LPJ_P0086201 Sbk1 protein_coding protein_coding MGP_LPJ_T0082560.1 MGP_LPJ_G0031891.1 mouse_genomes_project 7 29101111 29123500 - MGP_LPJ_P0082560 Zfp940 protein_coding protein_coding MGP_LPJ_T0082561.1 MGP_LPJ_G0031891.1 mouse_genomes_project 7 29113030 29123472 - Zfp940 protein_coding retained_intron MGP_LPJ_T0082562.1 MGP_LPJ_G0031891.1 mouse_genomes_project 7 29114554 29123355 - MGP_LPJ_P0082562 Zfp940 protein_coding unknown_likely_coding MGP_LPJ_T0082563.1 MGP_LPJ_G0031891.1 mouse_genomes_project 7 29120717 29123273 - Zfp940 protein_coding processed_transcript MGP_LPJ_T0011704.1 MGP_LPJ_G0009822.1 mouse_genomes_project 7 94843804 94844012 - Gm27660 misc_RNA misc_RNA MGP_LPJ_T0086900.1 MGP_LPJ_G0033018.1 mouse_genomes_project 7 137462653 137482772 - MGP_LPJ_P0086900 2310057M21Rik protein_coding protein_coding MGP_LPJ_T0081926.1 MGP_LPJ_G0031731.1 mouse_genomes_project 7 23104111 23121316 - MGP_LPJ_P0081926 Irgc1 protein_coding protein_coding MGP_LPJ_T0081927.1 MGP_LPJ_G0031731.1 mouse_genomes_project 7 23104111 23107719 - MGP_LPJ_P0081927 Irgc1 protein_coding protein_coding MGP_LPJ_T0081928.1 MGP_LPJ_G0031731.1 mouse_genomes_project 7 23105333 23127846 - MGP_LPJ_P0081928 Irgc1 protein_coding protein_coding MGP_LPJ_T0081929.1 MGP_LPJ_G0031731.1 mouse_genomes_project 7 23126154 23127972 - Irgc1 protein_coding processed_transcript MGP_LPJ_T0081930.1 MGP_LPJ_G0031731.1 mouse_genomes_project 7 23126557 23127962 - Irgc1 protein_coding processed_transcript MGP_LPJ_T0099690.1 MGP_LPJ_G0037953.1 mouse_genomes_project 7 1113046 1113217 + Gm23741 snRNA snRNA MGP_LPJ_T0086208.1 MGP_LPJ_G0032893.1 mouse_genomes_project 7 132097913 132104931 - MGP_LPJ_P0086208 Spns1 protein_coding protein_coding MGP_LPJ_T0086209.1 MGP_LPJ_G0032893.1 mouse_genomes_project 7 132097922 132105265 - Spns1 protein_coding retained_intron MGP_LPJ_T0086210.1 MGP_LPJ_G0032893.1 mouse_genomes_project 7 132097922 132105265 - MGP_LPJ_P0086210 Spns1 protein_coding nonsense_mediated_decay MGP_LPJ_T0086211.1 MGP_LPJ_G0032893.1 mouse_genomes_project 7 132097922 132105265 - MGP_LPJ_P0086211 Spns1 protein_coding protein_coding MGP_LPJ_T0086212.1 MGP_LPJ_G0032893.1 mouse_genomes_project 7 132098602 132104883 - MGP_LPJ_P0086212 Spns1 protein_coding protein_coding MGP_LPJ_T0086213.1 MGP_LPJ_G0032893.1 mouse_genomes_project 7 132099087 132100787 - Spns1 protein_coding retained_intron MGP_LPJ_T0086214.1 MGP_LPJ_G0032893.1 mouse_genomes_project 7 132099447 132104949 - MGP_LPJ_P0086214 Spns1 protein_coding nonsense_mediated_decay MGP_LPJ_T0086215.1 MGP_LPJ_G0032893.1 mouse_genomes_project 7 132099731 132100430 - Spns1 protein_coding retained_intron MGP_LPJ_T0086216.1 MGP_LPJ_G0032893.1 mouse_genomes_project 7 132100612 132105061 - MGP_LPJ_P0086216 Spns1 protein_coding protein_coding MGP_LPJ_T0086217.1 MGP_LPJ_G0032893.1 mouse_genomes_project 7 132101514 132102218 - Spns1 protein_coding retained_intron MGP_LPJ_T0086218.1 MGP_LPJ_G0032893.1 mouse_genomes_project 7 132102130 132104582 - Spns1 protein_coding processed_transcript MGP_LPJ_T0086219.1 MGP_LPJ_G0032893.1 mouse_genomes_project 7 132104551 132105275 - Spns1 protein_coding processed_transcript MGP_LPJ_T0084902.1 MGP_LPJ_G0032454.1 mouse_genomes_project 7 103322614 103342146 - MGP_LPJ_P0084902 Mogat2 protein_coding protein_coding MGP_LPJ_T0084903.1 MGP_LPJ_G0032454.1 mouse_genomes_project 7 103330110 103342121 - Mogat2 protein_coding processed_transcript MGP_LPJ_T0002253.1 MGP_LPJ_G0002162.1 mouse_genomes_project 7 50781237 50784817 + TEC TEC MGP_LPJ_T0002322.1 MGP_LPJ_G0002230.1 mouse_genomes_project 7 127888214 127890011 + TEC TEC MGP_LPJ_T0084707.1 MGP_LPJ_G0032413.1 mouse_genomes_project 7 94036837 94106499 + MGP_LPJ_P0084707 Sytl2 protein_coding protein_coding MGP_LPJ_T0084708.1 MGP_LPJ_G0032413.1 mouse_genomes_project 7 94036837 94106499 + MGP_LPJ_P0084708 Sytl2 protein_coding protein_coding MGP_LPJ_T0084709.1 MGP_LPJ_G0032413.1 mouse_genomes_project 7 94036837 94106499 + MGP_LPJ_P0084709 Sytl2 protein_coding protein_coding MGP_LPJ_T0084710.1 MGP_LPJ_G0032413.1 mouse_genomes_project 7 94036837 94106499 + MGP_LPJ_P0084710 Sytl2 protein_coding protein_coding MGP_LPJ_T0084711.1 MGP_LPJ_G0032413.1 mouse_genomes_project 7 94036930 94105607 + MGP_LPJ_P0084711 Sytl2 protein_coding unknown_likely_coding MGP_LPJ_T0084712.1 MGP_LPJ_G0032413.1 mouse_genomes_project 7 94070103 94106499 + Sytl2 protein_coding processed_transcript MGP_LPJ_T0084713.1 MGP_LPJ_G0032413.1 mouse_genomes_project 7 94070125 94106499 + Sytl2 protein_coding processed_transcript MGP_LPJ_T0084714.1 MGP_LPJ_G0032413.1 mouse_genomes_project 7 94088126 94106499 + Sytl2 protein_coding processed_transcript MGP_LPJ_T0010878.1 MGP_LPJ_G0008996.1 mouse_genomes_project 7 29867786 29867863 + Gm38670 miRNA miRNA MGP_LPJ_T0085707.1 MGP_LPJ_G0032784.1 mouse_genomes_project 7 117179558 117224839 - MGP_LPJ_P0085707 Dkk3 protein_coding protein_coding MGP_LPJ_T0099747.1 MGP_LPJ_G0038010.1 mouse_genomes_project 7 145740787 145740886 - Gm27975 snRNA snRNA MGP_LPJ_T0081877.1 MGP_LPJ_G0031719.1 mouse_genomes_project 7 22745385 22760830 + MGP_LPJ_P0081877 Zfp112 protein_coding protein_coding MGP_LPJ_T0081878.1 MGP_LPJ_G0031719.1 mouse_genomes_project 7 22745393 22760371 + MGP_LPJ_P0081878 Zfp112 protein_coding protein_coding MGP_LPJ_T0081879.1 MGP_LPJ_G0031719.1 mouse_genomes_project 7 22745429 22747522 + Zfp112 protein_coding retained_intron MGP_LPJ_T0081880.1 MGP_LPJ_G0031719.1 mouse_genomes_project 7 22745452 22766163 + MGP_LPJ_P0081880 Zfp112 protein_coding unknown_likely_coding MGP_LPJ_T0102343.1 MGP_LPJ_G0040379.1 mouse_genomes_project 7 32968571 32969835 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0081913.1 MGP_LPJ_G0031728.1 mouse_genomes_project 7 23015511 23022064 + MGP_LPJ_P0081913 Lypd5 protein_coding protein_coding MGP_LPJ_T0008901.1 MGP_LPJ_G0007189.1 mouse_genomes_project 7 68230218 68233401 + 1810008I18Rik lincRNA lincRNA MGP_LPJ_T0008902.1 MGP_LPJ_G0007189.1 mouse_genomes_project 7 68231138 68233564 + 1810008I18Rik lincRNA lincRNA MGP_LPJ_T0086803.1 MGP_LPJ_G0033001.1 mouse_genomes_project 7 134519882 134581725 + Inpp5f protein_coding processed_transcript MGP_LPJ_T0086804.1 MGP_LPJ_G0033001.1 mouse_genomes_project 7 134519914 134607138 + MGP_LPJ_P0086804 Inpp5f protein_coding protein_coding MGP_LPJ_T0086805.1 MGP_LPJ_G0033001.1 mouse_genomes_project 7 134568853 134587650 + Inpp5f protein_coding retained_intron MGP_LPJ_T0086806.1 MGP_LPJ_G0033001.1 mouse_genomes_project 7 134573583 134578472 + Inpp5f protein_coding processed_transcript MGP_LPJ_T0086807.1 MGP_LPJ_G0033001.1 mouse_genomes_project 7 134577591 134578677 + Inpp5f protein_coding retained_intron MGP_LPJ_T0086808.1 MGP_LPJ_G0033001.1 mouse_genomes_project 7 134589866 134606987 + Inpp5f protein_coding retained_intron MGP_LPJ_T0086809.1 MGP_LPJ_G0033001.1 mouse_genomes_project 7 134599194 134604371 + MGP_LPJ_P0086809 Inpp5f protein_coding nonsense_mediated_decay MGP_LPJ_T0086810.1 MGP_LPJ_G0033001.1 mouse_genomes_project 7 134599941 134606047 + MGP_LPJ_P0086810 Inpp5f protein_coding protein_coding MGP_LPJ_T0084108.1 MGP_LPJ_G0032264.1 mouse_genomes_project 7 69707271 69849205 - MGP_LPJ_P0084108 Mef2a protein_coding protein_coding MGP_LPJ_T0084109.1 MGP_LPJ_G0032264.1 mouse_genomes_project 7 69708026 69849205 - MGP_LPJ_P0084109 Mef2a protein_coding protein_coding MGP_LPJ_T0084110.1 MGP_LPJ_G0032264.1 mouse_genomes_project 7 69708192 69787734 - MGP_LPJ_P0084110 Mef2a protein_coding nonsense_mediated_decay MGP_LPJ_T0084111.1 MGP_LPJ_G0032264.1 mouse_genomes_project 7 69710147 69849205 - MGP_LPJ_P0084111 Mef2a protein_coding protein_coding MGP_LPJ_T0084112.1 MGP_LPJ_G0032264.1 mouse_genomes_project 7 69713103 69849205 - MGP_LPJ_P0084112 Mef2a protein_coding nonsense_mediated_decay MGP_LPJ_T0084113.1 MGP_LPJ_G0032264.1 mouse_genomes_project 7 69713163 69849205 - MGP_LPJ_P0084113 Mef2a protein_coding protein_coding MGP_LPJ_T0084114.1 MGP_LPJ_G0032264.1 mouse_genomes_project 7 69730763 69849205 - MGP_LPJ_P0084114 Mef2a protein_coding protein_coding MGP_LPJ_T0084115.1 MGP_LPJ_G0032264.1 mouse_genomes_project 7 69823531 69849174 - Mef2a protein_coding processed_transcript MGP_LPJ_T0085268.1 MGP_LPJ_G0032572.1 mouse_genomes_project 7 108007851 108008823 - MGP_LPJ_P0085268 protein_coding protein_coding MGP_LPJ_T0002220.1 MGP_LPJ_G0002129.1 mouse_genomes_project 7 417480 418865 - TEC TEC MGP_LPJ_T0009064.1 MGP_LPJ_G0007294.1 mouse_genomes_project 7 139118416 139160720 - 1500002F19Rik lincRNA lincRNA MGP_LPJ_T0083395.1 MGP_LPJ_G0032084.1 mouse_genomes_project 7 45629179 45658243 + MGP_LPJ_P0083395 Vrk3 protein_coding protein_coding MGP_LPJ_T0083396.1 MGP_LPJ_G0032084.1 mouse_genomes_project 7 45629251 45638880 + Vrk3 protein_coding retained_intron MGP_LPJ_T0083397.1 MGP_LPJ_G0032084.1 mouse_genomes_project 7 45629350 45640544 + MGP_LPJ_P0083397 Vrk3 protein_coding protein_coding MGP_LPJ_T0083398.1 MGP_LPJ_G0032084.1 mouse_genomes_project 7 45629402 45658243 + MGP_LPJ_P0083398 Vrk3 protein_coding nonsense_mediated_decay MGP_LPJ_T0083399.1 MGP_LPJ_G0032084.1 mouse_genomes_project 7 45629412 45643828 + MGP_LPJ_P0083399 Vrk3 protein_coding protein_coding MGP_LPJ_T0083400.1 MGP_LPJ_G0032084.1 mouse_genomes_project 7 45629413 45645584 + MGP_LPJ_P0083400 Vrk3 protein_coding protein_coding MGP_LPJ_T0083401.1 MGP_LPJ_G0032084.1 mouse_genomes_project 7 45629709 45634731 + MGP_LPJ_P0083401 Vrk3 protein_coding protein_coding MGP_LPJ_T0083402.1 MGP_LPJ_G0032084.1 mouse_genomes_project 7 45632887 45640182 + Vrk3 protein_coding processed_transcript MGP_LPJ_T0083403.1 MGP_LPJ_G0032084.1 mouse_genomes_project 7 45632889 45640182 + Vrk3 protein_coding processed_transcript MGP_LPJ_T0101608.1 MGP_LPJ_G0039685.1 mouse_genomes_project 7 39461499 39492399 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101609.1 MGP_LPJ_G0039685.1 mouse_genomes_project 7 39471761 39489849 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0082788.1 MGP_LPJ_G0031945.1 mouse_genomes_project 7 30056145 30086357 + Sbsn protein_coding processed_transcript MGP_LPJ_T0082789.1 MGP_LPJ_G0031945.1 mouse_genomes_project 7 30080216 30086364 + MGP_LPJ_P0082789 Sbsn protein_coding protein_coding MGP_LPJ_T0082790.1 MGP_LPJ_G0031945.1 mouse_genomes_project 7 30080220 30086365 + MGP_LPJ_P0082790 Sbsn protein_coding protein_coding MGP_LPJ_T0082791.1 MGP_LPJ_G0031945.1 mouse_genomes_project 7 30080276 30086364 + MGP_LPJ_P0082791 Sbsn protein_coding protein_coding MGP_LPJ_T0082792.1 MGP_LPJ_G0031945.1 mouse_genomes_project 7 30080304 30086365 + MGP_LPJ_P0082792 Sbsn protein_coding protein_coding MGP_LPJ_T0082793.1 MGP_LPJ_G0031945.1 mouse_genomes_project 7 30082910 30086357 + MGP_LPJ_P0082793 Sbsn protein_coding protein_coding MGP_LPJ_T0085619.1 MGP_LPJ_G0032766.1 mouse_genomes_project 7 114776978 114849281 - MGP_LPJ_P0085619 Scube2 protein_coding protein_coding MGP_LPJ_T0085620.1 MGP_LPJ_G0032766.1 mouse_genomes_project 7 114776992 114849374 - MGP_LPJ_P0085620 Scube2 protein_coding protein_coding MGP_LPJ_T0085621.1 MGP_LPJ_G0032766.1 mouse_genomes_project 7 114777135 114849338 - MGP_LPJ_P0085621 Scube2 protein_coding protein_coding MGP_LPJ_T0085622.1 MGP_LPJ_G0032766.1 mouse_genomes_project 7 114777391 114820625 - Scube2 protein_coding processed_transcript MGP_LPJ_T0085623.1 MGP_LPJ_G0032766.1 mouse_genomes_project 7 114778947 114786529 - Scube2 protein_coding processed_transcript MGP_LPJ_T0002258.1 MGP_LPJ_G0002167.1 mouse_genomes_project 7 56924992 56926383 + TEC TEC MGP_LPJ_T0100952.1 MGP_LPJ_G0039215.1 mouse_genomes_project 7 46039556 46039643 - Snord35b snoRNA snoRNA MGP_LPJ_T0083960.1 MGP_LPJ_G0032232.1 mouse_genomes_project 7 61940767 61950753 - MGP_LPJ_P0083960 protein_coding protein_coding MGP_LPJ_T0085117.1 MGP_LPJ_G0032499.1 mouse_genomes_project 7 106211193 106232464 + MGP_LPJ_P0085117 Anapc15 protein_coding protein_coding MGP_LPJ_T0085118.1 MGP_LPJ_G0032499.1 mouse_genomes_project 7 106228948 106230946 + Anapc15 protein_coding processed_transcript MGP_LPJ_T0085119.1 MGP_LPJ_G0032499.1 mouse_genomes_project 7 106229258 106232461 + MGP_LPJ_P0085119 Anapc15 protein_coding protein_coding MGP_LPJ_T0085120.1 MGP_LPJ_G0032499.1 mouse_genomes_project 7 106229326 106231148 + Anapc15 protein_coding retained_intron MGP_LPJ_T0085121.1 MGP_LPJ_G0032499.1 mouse_genomes_project 7 106229335 106234560 + MGP_LPJ_P0085121 Anapc15 protein_coding protein_coding MGP_LPJ_T0085122.1 MGP_LPJ_G0032499.1 mouse_genomes_project 7 106229346 106232459 + Anapc15 protein_coding retained_intron MGP_LPJ_T0085123.1 MGP_LPJ_G0032499.1 mouse_genomes_project 7 106229781 106230949 + Anapc15 protein_coding processed_transcript MGP_LPJ_T0085124.1 MGP_LPJ_G0032499.1 mouse_genomes_project 7 106229861 106234549 + MGP_LPJ_P0085124 Anapc15 protein_coding unknown_likely_coding MGP_LPJ_T0085125.1 MGP_LPJ_G0032499.1 mouse_genomes_project 7 106229879 106231963 + MGP_LPJ_P0085125 Anapc15 protein_coding protein_coding MGP_LPJ_T0085126.1 MGP_LPJ_G0032499.1 mouse_genomes_project 7 106230306 106231499 + Anapc15 protein_coding retained_intron MGP_LPJ_T0085127.1 MGP_LPJ_G0032499.1 mouse_genomes_project 7 106230652 106234766 + MGP_LPJ_P0085127 Anapc15 protein_coding protein_coding MGP_LPJ_T0085128.1 MGP_LPJ_G0032499.1 mouse_genomes_project 7 106230715 106234560 + MGP_LPJ_P0085128 Anapc15 protein_coding protein_coding MGP_LPJ_T0085130.1 MGP_LPJ_G0032499.1 mouse_genomes_project 7 106231912 106232465 + Anapc15 protein_coding processed_transcript MGP_LPJ_T0098301.1 MGP_LPJ_G0036582.1 mouse_genomes_project 7 28891484 28891600 - n-R5s153 rRNA rRNA MGP_LPJ_T0083462.1 MGP_LPJ_G0032100.1 mouse_genomes_project 7 45903729 45914765 - Scaf1 protein_coding retained_intron MGP_LPJ_T0083463.1 MGP_LPJ_G0032100.1 mouse_genomes_project 7 45903729 45917155 - MGP_LPJ_P0083463 Scaf1 protein_coding protein_coding MGP_LPJ_T0083464.1 MGP_LPJ_G0032100.1 mouse_genomes_project 7 45903729 45915196 - MGP_LPJ_P0083464 Scaf1 protein_coding protein_coding MGP_LPJ_T0083465.1 MGP_LPJ_G0032100.1 mouse_genomes_project 7 45911061 45916923 - Scaf1 protein_coding processed_transcript MGP_LPJ_T0083466.1 MGP_LPJ_G0032100.1 mouse_genomes_project 7 45912949 45914353 - Scaf1 protein_coding retained_intron MGP_LPJ_T0083467.1 MGP_LPJ_G0032100.1 mouse_genomes_project 7 45914043 45916649 - MGP_LPJ_P0083467 Scaf1 protein_coding protein_coding MGP_LPJ_T0083468.1 MGP_LPJ_G0032100.1 mouse_genomes_project 7 45914995 45915728 - Scaf1 protein_coding processed_transcript MGP_LPJ_T0082318.1 MGP_LPJ_G0031827.1 mouse_genomes_project 7 26898950 26920428 + MGP_LPJ_P0082318 protein_coding protein_coding MGP_LPJ_T0081561.1 MGP_LPJ_G0031617.1 mouse_genomes_project 7 14771618 14788622 + MGP_LPJ_P0081561 Slc1a5 protein_coding protein_coding MGP_LPJ_T0081562.1 MGP_LPJ_G0031617.1 mouse_genomes_project 7 14771646 14788622 + Slc1a5 protein_coding retained_intron MGP_LPJ_T0081563.1 MGP_LPJ_G0031617.1 mouse_genomes_project 7 14772683 14777441 + Slc1a5 protein_coding retained_intron MGP_LPJ_T0081564.1 MGP_LPJ_G0031617.1 mouse_genomes_project 7 14775020 14783986 + Slc1a5 protein_coding processed_transcript MGP_LPJ_T0081565.1 MGP_LPJ_G0031617.1 mouse_genomes_project 7 14775922 14777430 + Slc1a5 protein_coding retained_intron MGP_LPJ_T0081566.1 MGP_LPJ_G0031617.1 mouse_genomes_project 7 14776632 14784076 + Slc1a5 protein_coding retained_intron MGP_LPJ_T0081567.1 MGP_LPJ_G0031617.1 mouse_genomes_project 7 14783306 14786496 + Slc1a5 protein_coding processed_transcript MGP_LPJ_T0081568.1 MGP_LPJ_G0031617.1 mouse_genomes_project 7 14783456 14786260 + Slc1a5 protein_coding retained_intron MGP_LPJ_T0085306.1 MGP_LPJ_G0032607.1 mouse_genomes_project 7 108590569 108591508 + MGP_LPJ_P0085306 Olfr641 protein_coding protein_coding MGP_LPJ_T0015681.1 MGP_LPJ_G0013772.1 mouse_genomes_project 7 16309690 16311197 + processed_pseudogene processed_pseudogene MGP_LPJ_T0086521.1 MGP_LPJ_G0032944.1 mouse_genomes_project 7 133031674 133036793 + MGP_LPJ_P0086521 Zfp553 protein_coding protein_coding MGP_LPJ_T0086522.1 MGP_LPJ_G0032944.1 mouse_genomes_project 7 133031868 133036657 + MGP_LPJ_P0086522 Zfp553 protein_coding protein_coding MGP_LPJ_T0086523.1 MGP_LPJ_G0032944.1 mouse_genomes_project 7 133031907 133032734 + Zfp553 protein_coding retained_intron MGP_LPJ_T0084542.1 MGP_LPJ_G0032342.1 mouse_genomes_project 7 85104695 85144043 - MGP_LPJ_P0084542 Btbd1 protein_coding protein_coding MGP_LPJ_T0087097.1 MGP_LPJ_G0033067.1 mouse_genomes_project 7 146159441 146162862 - MGP_LPJ_P0087097 Nkx6-2 protein_coding nonsense_mediated_decay MGP_LPJ_T0087098.1 MGP_LPJ_G0033067.1 mouse_genomes_project 7 146161284 146162855 - MGP_LPJ_P0087098 Nkx6-2 protein_coding protein_coding MGP_LPJ_T0085873.1 MGP_LPJ_G0032815.1 mouse_genomes_project 7 123788355 123795195 - MGP_LPJ_P0085873 Itpripl2 protein_coding protein_coding MGP_LPJ_T0002340.1 MGP_LPJ_G0002248.1 mouse_genomes_project 7 133854108 133857435 + TEC TEC MGP_LPJ_T0100949.1 MGP_LPJ_G0039212.1 mouse_genomes_project 7 45077907 45077997 + Snord88c snoRNA snoRNA MGP_LPJ_T0018305.1 MGP_LPJ_G0015585.1 mouse_genomes_project 7 46561963 46572818 - processed_transcript processed_transcript MGP_LPJ_T0018306.1 MGP_LPJ_G0015585.1 mouse_genomes_project 7 46562116 46572818 - processed_transcript processed_transcript MGP_LPJ_T0018307.1 MGP_LPJ_G0015585.1 mouse_genomes_project 7 46562282 46572507 - processed_transcript retained_intron MGP_LPJ_T0018308.1 MGP_LPJ_G0015585.1 mouse_genomes_project 7 46562305 46572988 - processed_transcript processed_transcript MGP_LPJ_T0018309.1 MGP_LPJ_G0015585.1 mouse_genomes_project 7 46562401 46572818 - processed_transcript processed_transcript MGP_LPJ_T0018310.1 MGP_LPJ_G0015585.1 mouse_genomes_project 7 46566703 46572834 - processed_transcript retained_intron MGP_LPJ_T0018311.1 MGP_LPJ_G0015585.1 mouse_genomes_project 7 46567800 46568691 - processed_transcript processed_transcript MGP_LPJ_T0018312.1 MGP_LPJ_G0015585.1 mouse_genomes_project 7 46567827 46572855 - processed_transcript processed_transcript MGP_LPJ_T0018313.1 MGP_LPJ_G0015585.1 mouse_genomes_project 7 46571725 46572817 - processed_transcript retained_intron MGP_LPJ_T0005267.1 MGP_LPJ_G0004476.1 mouse_genomes_project 7 83616530 83618839 + Gm44851 antisense antisense MGP_LPJ_T0081741.1 MGP_LPJ_G0031673.1 mouse_genomes_project 7 17613807 17621129 - MGP_LPJ_P0081741 Fosb protein_coding protein_coding MGP_LPJ_T0081335.1 MGP_LPJ_G0031534.1 mouse_genomes_project 7 9054169 9055090 - MGP_LPJ_P0081335 Vmn1r72 protein_coding protein_coding MGP_LPJ_T0083916.1 MGP_LPJ_G0032223.1 mouse_genomes_project 7 57915206 57932706 + MGP_LPJ_P0083916 Herc2 protein_coding protein_coding MGP_LPJ_T0083917.1 MGP_LPJ_G0032223.1 mouse_genomes_project 7 57915263 58096873 + MGP_LPJ_P0083917 Herc2 protein_coding protein_coding MGP_LPJ_T0083918.1 MGP_LPJ_G0032223.1 mouse_genomes_project 7 57915399 58096836 + MGP_LPJ_P0083918 Herc2 protein_coding protein_coding MGP_LPJ_T0083919.1 MGP_LPJ_G0032223.1 mouse_genomes_project 7 57915776 57975489 + MGP_LPJ_P0083919 Herc2 protein_coding protein_coding MGP_LPJ_T0083920.1 MGP_LPJ_G0032223.1 mouse_genomes_project 7 57915888 58096205 + MGP_LPJ_P0083920 Herc2 protein_coding protein_coding MGP_LPJ_T0083921.1 MGP_LPJ_G0032223.1 mouse_genomes_project 7 57915958 57937654 + Herc2 protein_coding retained_intron MGP_LPJ_T0083922.1 MGP_LPJ_G0032223.1 mouse_genomes_project 7 58023433 58028082 + Herc2 protein_coding processed_transcript MGP_LPJ_T0083923.1 MGP_LPJ_G0032223.1 mouse_genomes_project 7 58085572 58096174 + MGP_LPJ_P0083923 Herc2 protein_coding protein_coding MGP_LPJ_T0087239.1 MGP_LPJ_G0033119.1 mouse_genomes_project 7 147596750 147599422 - MGP_LPJ_P0087239 Ifitm2 protein_coding protein_coding MGP_LPJ_T0083292.1 MGP_LPJ_G0032065.1 mouse_genomes_project 7 45145747 45197386 + MGP_LPJ_P0083292 Shank1 protein_coding protein_coding MGP_LPJ_T0083293.1 MGP_LPJ_G0032065.1 mouse_genomes_project 7 45148166 45194433 + MGP_LPJ_P0083293 Shank1 protein_coding protein_coding MGP_LPJ_T0083294.1 MGP_LPJ_G0032065.1 mouse_genomes_project 7 45148185 45194283 + MGP_LPJ_P0083294 Shank1 protein_coding protein_coding MGP_LPJ_T0083295.1 MGP_LPJ_G0032065.1 mouse_genomes_project 7 45172997 45180720 + Shank1 protein_coding processed_transcript MGP_LPJ_T0083296.1 MGP_LPJ_G0032065.1 mouse_genomes_project 7 45179116 45188304 + Shank1 protein_coding retained_intron MGP_LPJ_T0083297.1 MGP_LPJ_G0032065.1 mouse_genomes_project 7 45187707 45189003 + Shank1 protein_coding retained_intron MGP_LPJ_T0085983.1 MGP_LPJ_G0032846.1 mouse_genomes_project 7 125820807 125899073 + MGP_LPJ_P0085983 Abca16 protein_coding nonsense_mediated_decay MGP_LPJ_T0085984.1 MGP_LPJ_G0032846.1 mouse_genomes_project 7 125838256 125963948 + MGP_LPJ_P0085984 Abca16 protein_coding protein_coding MGP_LPJ_T0085985.1 MGP_LPJ_G0032846.1 mouse_genomes_project 7 125838256 125963948 + MGP_LPJ_P0085985 Abca16 protein_coding protein_coding MGP_LPJ_T0085986.1 MGP_LPJ_G0032846.1 mouse_genomes_project 7 125894095 125913232 + Abca16 protein_coding retained_intron MGP_LPJ_T0086451.1 MGP_LPJ_G0032930.1 mouse_genomes_project 7 132780965 132801251 - MGP_LPJ_P0086451 protein_coding nonsense_mediated_decay MGP_LPJ_T0102458.1 MGP_LPJ_G0040494.1 mouse_genomes_project 7 109209440 109210406 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0085336.1 MGP_LPJ_G0032623.1 mouse_genomes_project 7 108816382 108833425 - MGP_LPJ_P0085336 protein_coding protein_coding MGP_LPJ_T0085340.1 MGP_LPJ_G0032623.1 mouse_genomes_project 7 108822473 108833412 - MGP_LPJ_P0085340 protein_coding protein_coding MGP_LPJ_T0085615.1 MGP_LPJ_G0032764.1 mouse_genomes_project 7 114710604 114726953 - MGP_LPJ_P0085615 Tmem9b protein_coding protein_coding MGP_LPJ_T0085616.1 MGP_LPJ_G0032764.1 mouse_genomes_project 7 114720128 114727021 - MGP_LPJ_P0085616 Tmem9b protein_coding protein_coding MGP_LPJ_T0085559.1 MGP_LPJ_G0032736.1 mouse_genomes_project 7 113383739 113384684 + MGP_LPJ_P0085559 Olfr497 protein_coding protein_coding MGP_LPJ_T0010884.1 MGP_LPJ_G0009002.1 mouse_genomes_project 7 44209911 44209984 + Mir7051 miRNA miRNA MGP_LPJ_T0081462.1 MGP_LPJ_G0031584.1 mouse_genomes_project 7 11925975 11928096 - MGP_LPJ_P0081462 Obox8 protein_coding protein_coding MGP_LPJ_T0085594.1 MGP_LPJ_G0032758.1 mouse_genomes_project 7 114406720 114452098 - MGP_LPJ_P0085594 Trim66 protein_coding protein_coding MGP_LPJ_T0085595.1 MGP_LPJ_G0032758.1 mouse_genomes_project 7 114411205 114466910 - MGP_LPJ_P0085595 Trim66 protein_coding protein_coding MGP_LPJ_T0085596.1 MGP_LPJ_G0032758.1 mouse_genomes_project 7 114411205 114466910 - MGP_LPJ_P0085596 Trim66 protein_coding protein_coding MGP_LPJ_T0085597.1 MGP_LPJ_G0032758.1 mouse_genomes_project 7 114427449 114432875 - Trim66 protein_coding processed_transcript MGP_LPJ_T0085174.1 MGP_LPJ_G0032510.1 mouse_genomes_project 7 106446411 106455810 + MGP_LPJ_P0085174 Art1 protein_coding protein_coding MGP_LPJ_T0102345.1 MGP_LPJ_G0040381.1 mouse_genomes_project 7 32968572 32969838 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0015834.1 MGP_LPJ_G0013925.1 mouse_genomes_project 7 108888502 108889632 - processed_pseudogene processed_pseudogene MGP_LPJ_T0081081.1 MGP_LPJ_G0031445.1 mouse_genomes_project 7 1167236 1185307 - MGP_LPJ_P0081081 1700027J19Rik protein_coding protein_coding MGP_LPJ_T0081082.1 MGP_LPJ_G0031445.1 mouse_genomes_project 7 1167527 1184986 - MGP_LPJ_P0081082 1700027J19Rik protein_coding protein_coding MGP_LPJ_T0081083.1 MGP_LPJ_G0031445.1 mouse_genomes_project 7 1167752 1184889 - MGP_LPJ_P0081083 1700027J19Rik protein_coding protein_coding MGP_LPJ_T0002261.1 MGP_LPJ_G0002170.1 mouse_genomes_project 7 57839725 57841052 - TEC TEC MGP_LPJ_T0018316.1 MGP_LPJ_G0015587.1 mouse_genomes_project 7 57828942 57839288 + A230056P14Rik processed_transcript processed_transcript MGP_LPJ_T0018317.1 MGP_LPJ_G0015587.1 mouse_genomes_project 7 57828942 57847098 + A230056P14Rik processed_transcript processed_transcript MGP_LPJ_T0085473.1 MGP_LPJ_G0032676.1 mouse_genomes_project 7 110414781 110419750 - MGP_LPJ_P0085473 Taf10 protein_coding protein_coding MGP_LPJ_T0085481.1 MGP_LPJ_G0032676.1 mouse_genomes_project 7 110418284 110419471 - Taf10 protein_coding retained_intron MGP_LPJ_T0085482.1 MGP_LPJ_G0032676.1 mouse_genomes_project 7 110418294 110418999 - Taf10 protein_coding retained_intron MGP_LPJ_T0085483.1 MGP_LPJ_G0032676.1 mouse_genomes_project 7 110418625 110419731 - Taf10 protein_coding retained_intron MGP_LPJ_T0081865.1 MGP_LPJ_G0031711.1 mouse_genomes_project 7 22039070 22428833 - MGP_LPJ_P0081865 Vmn1r175 protein_coding protein_coding MGP_LPJ_T0002284.1 MGP_LPJ_G0002192.1 mouse_genomes_project 7 76762880 76765080 - TEC TEC MGP_LPJ_T0087470.1 MGP_LPJ_G0033167.1 mouse_genomes_project 7 149002367 149020164 - MGP_LPJ_P0087470 protein_coding protein_coding MGP_LPJ_T0084569.1 MGP_LPJ_G0032349.1 mouse_genomes_project 7 85973741 85989294 - MGP_LPJ_P0084569 Saxo2 protein_coding protein_coding MGP_LPJ_T0084570.1 MGP_LPJ_G0032349.1 mouse_genomes_project 7 85975218 85989200 - MGP_LPJ_P0084570 Saxo2 protein_coding unknown_likely_coding MGP_LPJ_T0084571.1 MGP_LPJ_G0032349.1 mouse_genomes_project 7 85976042 85989294 - Saxo2 protein_coding processed_transcript MGP_LPJ_T0084572.1 MGP_LPJ_G0032349.1 mouse_genomes_project 7 85982916 85989299 - Saxo2 protein_coding retained_intron MGP_LPJ_T0084573.1 MGP_LPJ_G0032349.1 mouse_genomes_project 7 85986946 85989299 - Saxo2 protein_coding processed_transcript MGP_LPJ_T0081528.1 MGP_LPJ_G0031606.1 mouse_genomes_project 7 14212170 14215140 - MGP_LPJ_P0081528 Inafm1 protein_coding protein_coding MGP_LPJ_T0100950.1 MGP_LPJ_G0039213.1 mouse_genomes_project 7 45078190 45078280 + Snord88a snoRNA snoRNA MGP_LPJ_T0082137.1 MGP_LPJ_G0031782.1 mouse_genomes_project 7 24544598 24578545 - MGP_LPJ_P0082137 Axl protein_coding protein_coding MGP_LPJ_T0082138.1 MGP_LPJ_G0031782.1 mouse_genomes_project 7 24544955 24578563 - MGP_LPJ_P0082138 Axl protein_coding protein_coding MGP_LPJ_T0082139.1 MGP_LPJ_G0031782.1 mouse_genomes_project 7 24548003 24551387 - Axl protein_coding retained_intron MGP_LPJ_T0082140.1 MGP_LPJ_G0031782.1 mouse_genomes_project 7 24548694 24551736 - Axl protein_coding retained_intron MGP_LPJ_T0082141.1 MGP_LPJ_G0031782.1 mouse_genomes_project 7 24551116 24578558 - Axl protein_coding retained_intron MGP_LPJ_T0082142.1 MGP_LPJ_G0031782.1 mouse_genomes_project 7 24553735 24561888 - MGP_LPJ_P0082142 Axl protein_coding protein_coding MGP_LPJ_T0082143.1 MGP_LPJ_G0031782.1 mouse_genomes_project 7 24565619 24575346 - Axl protein_coding retained_intron MGP_LPJ_T0082144.1 MGP_LPJ_G0031782.1 mouse_genomes_project 7 24574213 24575852 - Axl protein_coding retained_intron MGP_LPJ_T0082145.1 MGP_LPJ_G0031783.1 mouse_genomes_project 7 24592634 24609243 - MGP_LPJ_P0082145 Cyp2s1 protein_coding protein_coding MGP_LPJ_T0082146.1 MGP_LPJ_G0031783.1 mouse_genomes_project 7 24592634 24608983 - MGP_LPJ_P0082146 Cyp2s1 protein_coding protein_coding MGP_LPJ_T0082147.1 MGP_LPJ_G0031783.1 mouse_genomes_project 7 24594307 24608888 - Cyp2s1 protein_coding retained_intron MGP_LPJ_T0082148.1 MGP_LPJ_G0031783.1 mouse_genomes_project 7 24599503 24607734 - MGP_LPJ_P0082148 Cyp2s1 protein_coding protein_coding MGP_LPJ_T0083904.1 MGP_LPJ_G0032221.1 mouse_genomes_project 7 57801978 57828888 - MGP_LPJ_P0083904 Nipa2 protein_coding protein_coding MGP_LPJ_T0083905.1 MGP_LPJ_G0032221.1 mouse_genomes_project 7 57801978 57828851 - MGP_LPJ_P0083905 Nipa2 protein_coding protein_coding MGP_LPJ_T0083906.1 MGP_LPJ_G0032221.1 mouse_genomes_project 7 57801978 57828657 - MGP_LPJ_P0083906 Nipa2 protein_coding protein_coding MGP_LPJ_T0083907.1 MGP_LPJ_G0032221.1 mouse_genomes_project 7 57801978 57828862 - MGP_LPJ_P0083907 Nipa2 protein_coding protein_coding MGP_LPJ_T0083908.1 MGP_LPJ_G0032221.1 mouse_genomes_project 7 57803940 57828804 - Nipa2 protein_coding processed_transcript MGP_LPJ_T0083909.1 MGP_LPJ_G0032221.1 mouse_genomes_project 7 57804205 57808752 - Nipa2 protein_coding retained_intron MGP_LPJ_T0083910.1 MGP_LPJ_G0032221.1 mouse_genomes_project 7 57806489 57828888 - MGP_LPJ_P0083910 Nipa2 protein_coding protein_coding MGP_LPJ_T0083911.1 MGP_LPJ_G0032221.1 mouse_genomes_project 7 57806537 57828842 - MGP_LPJ_P0083911 Nipa2 protein_coding protein_coding MGP_LPJ_T0083912.1 MGP_LPJ_G0032221.1 mouse_genomes_project 7 57812634 57828880 - Nipa2 protein_coding retained_intron MGP_LPJ_T0083913.1 MGP_LPJ_G0032221.1 mouse_genomes_project 7 57812811 57816665 - Nipa2 protein_coding retained_intron MGP_LPJ_T0083914.1 MGP_LPJ_G0032221.1 mouse_genomes_project 7 57816327 57828585 - MGP_LPJ_P0083914 Nipa2 protein_coding protein_coding MGP_LPJ_T0081052.1 MGP_LPJ_G0031442.1 mouse_genomes_project 7 1133394 1140375 + Ttyh1 protein_coding processed_transcript MGP_LPJ_T0081053.1 MGP_LPJ_G0031442.1 mouse_genomes_project 7 1133516 1149736 + Ttyh1 protein_coding retained_intron MGP_LPJ_T0081054.1 MGP_LPJ_G0031442.1 mouse_genomes_project 7 1133516 1150134 + MGP_LPJ_P0081054 Ttyh1 protein_coding protein_coding MGP_LPJ_T0081055.1 MGP_LPJ_G0031442.1 mouse_genomes_project 7 1133519 1152648 + MGP_LPJ_P0081055 Ttyh1 protein_coding protein_coding MGP_LPJ_T0081056.1 MGP_LPJ_G0031442.1 mouse_genomes_project 7 1133542 1140406 + Ttyh1 protein_coding processed_transcript MGP_LPJ_T0081057.1 MGP_LPJ_G0031442.1 mouse_genomes_project 7 1133571 1150120 + MGP_LPJ_P0081057 Ttyh1 protein_coding protein_coding MGP_LPJ_T0081058.1 MGP_LPJ_G0031442.1 mouse_genomes_project 7 1133574 1140415 + MGP_LPJ_P0081058 Ttyh1 protein_coding nonsense_mediated_decay MGP_LPJ_T0081059.1 MGP_LPJ_G0031442.1 mouse_genomes_project 7 1133608 1143052 + MGP_LPJ_P0081059 Ttyh1 protein_coding nonsense_mediated_decay MGP_LPJ_T0081060.1 MGP_LPJ_G0031442.1 mouse_genomes_project 7 1133740 1150117 + MGP_LPJ_P0081060 Ttyh1 protein_coding nonsense_mediated_decay MGP_LPJ_T0081061.1 MGP_LPJ_G0031442.1 mouse_genomes_project 7 1134206 1140347 + Ttyh1 protein_coding processed_transcript MGP_LPJ_T0081062.1 MGP_LPJ_G0031442.1 mouse_genomes_project 7 1136933 1150194 + Ttyh1 protein_coding retained_intron MGP_LPJ_T0081063.1 MGP_LPJ_G0031442.1 mouse_genomes_project 7 1139275 1149026 + MGP_LPJ_P0081063 Ttyh1 protein_coding protein_coding MGP_LPJ_T0081064.1 MGP_LPJ_G0031442.1 mouse_genomes_project 7 1140453 1148206 + Ttyh1 protein_coding processed_transcript MGP_LPJ_T0081065.1 MGP_LPJ_G0031442.1 mouse_genomes_project 7 1143012 1144906 + Ttyh1 protein_coding retained_intron MGP_LPJ_T0081066.1 MGP_LPJ_G0031442.1 mouse_genomes_project 7 1144032 1147984 + Ttyh1 protein_coding retained_intron MGP_LPJ_T0081067.1 MGP_LPJ_G0031442.1 mouse_genomes_project 7 1145405 1146677 + Ttyh1 protein_coding retained_intron MGP_LPJ_T0081068.1 MGP_LPJ_G0031442.1 mouse_genomes_project 7 1145923 1146821 + Ttyh1 protein_coding retained_intron MGP_LPJ_T0081069.1 MGP_LPJ_G0031442.1 mouse_genomes_project 7 1147816 1148759 + Ttyh1 protein_coding retained_intron MGP_LPJ_T0085311.1 MGP_LPJ_G0032612.1 mouse_genomes_project 7 108654465 108655404 + MGP_LPJ_P0085311 Olfr646 protein_coding protein_coding MGP_LPJ_T0009022.1 MGP_LPJ_G0007267.1 mouse_genomes_project 7 130109497 130128046 - Gm15339 lincRNA lincRNA MGP_LPJ_T0008985.1 MGP_LPJ_G0007244.1 mouse_genomes_project 7 98223537 98226126 - Gm44601 lincRNA lincRNA MGP_LPJ_T0002330.1 MGP_LPJ_G0002238.1 mouse_genomes_project 7 131753579 131755121 - TEC TEC MGP_LPJ_T0080980.1 MGP_LPJ_G0031429.1 mouse_genomes_project 7 562187 574686 + MGP_LPJ_P0080980 Prpf31 protein_coding protein_coding MGP_LPJ_T0080981.1 MGP_LPJ_G0031429.1 mouse_genomes_project 7 562187 574687 + MGP_LPJ_P0080981 Prpf31 protein_coding protein_coding MGP_LPJ_T0080982.1 MGP_LPJ_G0031429.1 mouse_genomes_project 7 562194 563624 + Prpf31 protein_coding retained_intron MGP_LPJ_T0080983.1 MGP_LPJ_G0031429.1 mouse_genomes_project 7 562261 569259 + MGP_LPJ_P0080983 Prpf31 protein_coding nonsense_mediated_decay MGP_LPJ_T0080984.1 MGP_LPJ_G0031429.1 mouse_genomes_project 7 562759 573430 + MGP_LPJ_P0080984 Prpf31 protein_coding protein_coding MGP_LPJ_T0080985.1 MGP_LPJ_G0031429.1 mouse_genomes_project 7 568297 569259 + Prpf31 protein_coding retained_intron MGP_LPJ_T0084323.1 MGP_LPJ_G0032300.1 mouse_genomes_project 7 82897014 82905414 - MGP_LPJ_P0084323 Pex11a protein_coding protein_coding MGP_LPJ_T0084324.1 MGP_LPJ_G0032300.1 mouse_genomes_project 7 82898146 82905465 - Pex11a protein_coding processed_transcript MGP_LPJ_T0084325.1 MGP_LPJ_G0032300.1 mouse_genomes_project 7 82898307 82899782 - Pex11a protein_coding retained_intron MGP_LPJ_T0084326.1 MGP_LPJ_G0032300.1 mouse_genomes_project 7 82898829 82901414 - Pex11a protein_coding retained_intron MGP_LPJ_T0081739.1 MGP_LPJ_G0031672.1 mouse_genomes_project 7 17592742 17606656 + MGP_LPJ_P0081739 Rtn2 protein_coding protein_coding MGP_LPJ_T0081740.1 MGP_LPJ_G0031672.1 mouse_genomes_project 7 17601724 17606651 + MGP_LPJ_P0081740 Rtn2 protein_coding protein_coding MGP_LPJ_T0083632.1 MGP_LPJ_G0032147.1 mouse_genomes_project 7 46711194 46717886 + MGP_LPJ_P0083632 Car11 protein_coding protein_coding MGP_LPJ_T0083633.1 MGP_LPJ_G0032147.1 mouse_genomes_project 7 46711600 46717845 + MGP_LPJ_P0083633 Car11 protein_coding unknown_likely_coding MGP_LPJ_T0083639.1 MGP_LPJ_G0032149.1 mouse_genomes_project 7 46722692 46731226 - MGP_LPJ_P0083639 Sphk2 protein_coding protein_coding MGP_LPJ_T0083640.1 MGP_LPJ_G0032149.1 mouse_genomes_project 7 46723492 46731126 - MGP_LPJ_P0083640 Sphk2 protein_coding protein_coding MGP_LPJ_T0083641.1 MGP_LPJ_G0032149.1 mouse_genomes_project 7 46723510 46728435 - MGP_LPJ_P0083641 Sphk2 protein_coding protein_coding MGP_LPJ_T0018319.1 MGP_LPJ_G0015589.1 mouse_genomes_project 7 57903941 57914985 - Gm34121 processed_transcript lincRNA MGP_LPJ_T0018320.1 MGP_LPJ_G0015589.1 mouse_genomes_project 7 57911402 57914950 - Gm34121 processed_transcript retained_intron MGP_LPJ_T0084616.1 MGP_LPJ_G0032364.1 mouse_genomes_project 7 88027220 88048515 - MGP_LPJ_P0084616 Fah protein_coding protein_coding MGP_LPJ_T0084617.1 MGP_LPJ_G0032364.1 mouse_genomes_project 7 88037580 88049413 - MGP_LPJ_P0084617 Fah protein_coding protein_coding MGP_LPJ_T0084618.1 MGP_LPJ_G0032364.1 mouse_genomes_project 7 88043118 88044142 - Fah protein_coding processed_transcript MGP_LPJ_T0084619.1 MGP_LPJ_G0032364.1 mouse_genomes_project 7 88043662 88048417 - Fah protein_coding retained_intron MGP_LPJ_T0018387.1 MGP_LPJ_G0015619.1 mouse_genomes_project 7 148639741 148640537 - processed_transcript processed_transcript MGP_LPJ_T0085246.1 MGP_LPJ_G0032552.1 mouse_genomes_project 7 107511324 107512284 + MGP_LPJ_P0085246 Olfr585 protein_coding protein_coding MGP_LPJ_T0102403.1 MGP_LPJ_G0040439.1 mouse_genomes_project 7 49806330 49806911 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0015861.1 MGP_LPJ_G0013952.1 mouse_genomes_project 7 131232464 131233798 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005321.1 MGP_LPJ_G0004513.1 mouse_genomes_project 7 133432669 133438154 - Gm44759 antisense antisense MGP_LPJ_T0083556.1 MGP_LPJ_G0032128.1 mouse_genomes_project 7 46379126 46396862 - MGP_LPJ_P0083556 Ruvbl2 protein_coding protein_coding MGP_LPJ_T0083557.1 MGP_LPJ_G0032128.1 mouse_genomes_project 7 46379172 46391878 - MGP_LPJ_P0083557 Ruvbl2 protein_coding protein_coding MGP_LPJ_T0083558.1 MGP_LPJ_G0032128.1 mouse_genomes_project 7 46382225 46391964 - MGP_LPJ_P0083558 Ruvbl2 protein_coding protein_coding MGP_LPJ_T0102295.1 MGP_LPJ_G0040332.1 mouse_genomes_project 7 7865766 7866645 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0084741.1 MGP_LPJ_G0032420.1 mouse_genomes_project 7 96384757 96437821 - MGP_LPJ_P0084741 Ankrd42 protein_coding protein_coding MGP_LPJ_T0084742.1 MGP_LPJ_G0032420.1 mouse_genomes_project 7 96387217 96437861 - MGP_LPJ_P0084742 Ankrd42 protein_coding protein_coding MGP_LPJ_T0084743.1 MGP_LPJ_G0032420.1 mouse_genomes_project 7 96387233 96437855 - MGP_LPJ_P0084743 Ankrd42 protein_coding nonsense_mediated_decay MGP_LPJ_T0084744.1 MGP_LPJ_G0032420.1 mouse_genomes_project 7 96404580 96410928 - Ankrd42 protein_coding retained_intron MGP_LPJ_T0084745.1 MGP_LPJ_G0032420.1 mouse_genomes_project 7 96409730 96437754 - Ankrd42 protein_coding retained_intron MGP_LPJ_T0084746.1 MGP_LPJ_G0032420.1 mouse_genomes_project 7 96409982 96437849 - Ankrd42 protein_coding processed_transcript MGP_LPJ_T0084443.1 MGP_LPJ_G0032322.1 mouse_genomes_project 7 83667359 83677644 - MGP_LPJ_P0084443 Blm protein_coding protein_coding MGP_LPJ_T0084444.1 MGP_LPJ_G0032322.1 mouse_genomes_project 7 83667854 83752737 - MGP_LPJ_P0084444 Blm protein_coding protein_coding MGP_LPJ_T0084445.1 MGP_LPJ_G0032322.1 mouse_genomes_project 7 83667953 83752616 - MGP_LPJ_P0084445 Blm protein_coding protein_coding MGP_LPJ_T0084446.1 MGP_LPJ_G0032322.1 mouse_genomes_project 7 83668099 83670233 - Blm protein_coding processed_transcript MGP_LPJ_T0084447.1 MGP_LPJ_G0032322.1 mouse_genomes_project 7 83668254 83672114 - Blm protein_coding retained_intron MGP_LPJ_T0084448.1 MGP_LPJ_G0032322.1 mouse_genomes_project 7 83668282 83673685 - MGP_LPJ_P0084448 Blm protein_coding nonsense_mediated_decay MGP_LPJ_T0084449.1 MGP_LPJ_G0032322.1 mouse_genomes_project 7 83677613 83680326 - MGP_LPJ_P0084449 Blm protein_coding nonsense_mediated_decay MGP_LPJ_T0084450.1 MGP_LPJ_G0032322.1 mouse_genomes_project 7 83682074 83730516 - Blm protein_coding retained_intron MGP_LPJ_T0084451.1 MGP_LPJ_G0032322.1 mouse_genomes_project 7 83682100 83684608 - Blm protein_coding retained_intron MGP_LPJ_T0084452.1 MGP_LPJ_G0032322.1 mouse_genomes_project 7 83686973 83695778 - Blm protein_coding retained_intron MGP_LPJ_T0086528.1 MGP_LPJ_G0032947.1 mouse_genomes_project 7 133072564 133074735 - MGP_LPJ_P0086528 protein_coding protein_coding MGP_LPJ_T0082290.1 MGP_LPJ_G0031821.1 mouse_genomes_project 7 26589527 26661309 + MGP_LPJ_P0082290 Akt2 protein_coding protein_coding MGP_LPJ_T0082291.1 MGP_LPJ_G0031821.1 mouse_genomes_project 7 26592088 26659933 + MGP_LPJ_P0082291 Akt2 protein_coding protein_coding MGP_LPJ_T0082292.1 MGP_LPJ_G0031821.1 mouse_genomes_project 7 26592710 26644443 + MGP_LPJ_P0082292 Akt2 protein_coding protein_coding MGP_LPJ_T0082293.1 MGP_LPJ_G0031821.1 mouse_genomes_project 7 26592800 26648273 + MGP_LPJ_P0082293 Akt2 protein_coding protein_coding MGP_LPJ_T0082294.1 MGP_LPJ_G0031821.1 mouse_genomes_project 7 26593888 26630037 + Akt2 protein_coding processed_transcript MGP_LPJ_T0082295.1 MGP_LPJ_G0031821.1 mouse_genomes_project 7 26597172 26631924 + MGP_LPJ_P0082295 Akt2 protein_coding protein_coding MGP_LPJ_T0082296.1 MGP_LPJ_G0031821.1 mouse_genomes_project 7 26606114 26644467 + MGP_LPJ_P0082296 Akt2 protein_coding protein_coding MGP_LPJ_T0082297.1 MGP_LPJ_G0031821.1 mouse_genomes_project 7 26606134 26659931 + MGP_LPJ_P0082297 Akt2 protein_coding protein_coding MGP_LPJ_T0082298.1 MGP_LPJ_G0031821.1 mouse_genomes_project 7 26606175 26659936 + MGP_LPJ_P0082298 Akt2 protein_coding protein_coding MGP_LPJ_T0082299.1 MGP_LPJ_G0031821.1 mouse_genomes_project 7 26608065 26648253 + MGP_LPJ_P0082299 Akt2 protein_coding protein_coding MGP_LPJ_T0082300.1 MGP_LPJ_G0031821.1 mouse_genomes_project 7 26608321 26631977 + MGP_LPJ_P0082300 Akt2 protein_coding protein_coding MGP_LPJ_T0082301.1 MGP_LPJ_G0031821.1 mouse_genomes_project 7 26608979 26655960 + MGP_LPJ_P0082301 Akt2 protein_coding protein_coding MGP_LPJ_T0082302.1 MGP_LPJ_G0031821.1 mouse_genomes_project 7 26644122 26649814 + Akt2 protein_coding retained_intron MGP_LPJ_T0082303.1 MGP_LPJ_G0031821.1 mouse_genomes_project 7 26653392 26655236 + Akt2 protein_coding retained_intron MGP_LPJ_T0083009.1 MGP_LPJ_G0031982.1 mouse_genomes_project 7 34732218 34742373 - MGP_LPJ_P0083009 Cebpg protein_coding protein_coding MGP_LPJ_T0083010.1 MGP_LPJ_G0031982.1 mouse_genomes_project 7 34735692 34737302 - Cebpg protein_coding retained_intron MGP_LPJ_T0083011.1 MGP_LPJ_G0031982.1 mouse_genomes_project 7 34736111 34741740 - MGP_LPJ_P0083011 Cebpg protein_coding protein_coding MGP_LPJ_T0083012.1 MGP_LPJ_G0031982.1 mouse_genomes_project 7 34736661 34741783 - Cebpg protein_coding processed_transcript MGP_LPJ_T0082957.1 MGP_LPJ_G0031974.1 mouse_genomes_project 7 33813550 33828426 - MGP_LPJ_P0082957 Pdcd2l protein_coding protein_coding MGP_LPJ_T0082958.1 MGP_LPJ_G0031974.1 mouse_genomes_project 7 33813684 33828373 - MGP_LPJ_P0082958 Pdcd2l protein_coding protein_coding MGP_LPJ_T0082959.1 MGP_LPJ_G0031974.1 mouse_genomes_project 7 33819210 33824541 - Pdcd2l protein_coding retained_intron MGP_LPJ_T0082960.1 MGP_LPJ_G0031974.1 mouse_genomes_project 7 33824602 33827911 - Pdcd2l protein_coding processed_transcript MGP_LPJ_T0099702.1 MGP_LPJ_G0037965.1 mouse_genomes_project 7 37698610 37698716 - Gm22302 snRNA snRNA MGP_LPJ_T0081508.1 MGP_LPJ_G0031602.1 mouse_genomes_project 7 14107112 14110842 + MGP_LPJ_P0081508 Meis3 protein_coding protein_coding MGP_LPJ_T0081509.1 MGP_LPJ_G0031602.1 mouse_genomes_project 7 14107161 14110840 + MGP_LPJ_P0081509 Meis3 protein_coding protein_coding MGP_LPJ_T0081510.1 MGP_LPJ_G0031602.1 mouse_genomes_project 7 14107297 14119839 + MGP_LPJ_P0081510 Meis3 protein_coding protein_coding MGP_LPJ_T0081511.1 MGP_LPJ_G0031602.1 mouse_genomes_project 7 14107410 14119836 + Meis3 protein_coding retained_intron MGP_LPJ_T0081512.1 MGP_LPJ_G0031602.1 mouse_genomes_project 7 14107452 14119839 + MGP_LPJ_P0081512 Meis3 protein_coding nonsense_mediated_decay MGP_LPJ_T0081513.1 MGP_LPJ_G0031602.1 mouse_genomes_project 7 14107452 14119839 + MGP_LPJ_P0081513 Meis3 protein_coding protein_coding MGP_LPJ_T0081514.1 MGP_LPJ_G0031602.1 mouse_genomes_project 7 14109747 14110483 + Meis3 protein_coding retained_intron MGP_LPJ_T0081515.1 MGP_LPJ_G0031602.1 mouse_genomes_project 7 14111089 14118850 + MGP_LPJ_P0081515 Meis3 protein_coding nonsense_mediated_decay MGP_LPJ_T0081516.1 MGP_LPJ_G0031602.1 mouse_genomes_project 7 14115818 14119839 + Meis3 protein_coding retained_intron MGP_LPJ_T0085368.1 MGP_LPJ_G0032640.1 mouse_genomes_project 7 109420729 109422004 - MGP_LPJ_P0085368 Olfr666 protein_coding protein_coding MGP_LPJ_T0011710.1 MGP_LPJ_G0009828.1 mouse_genomes_project 7 132988326 132988579 + Gm25735 misc_RNA misc_RNA MGP_LPJ_T0005331.1 MGP_LPJ_G0004522.1 mouse_genomes_project 7 138871778 138874273 - Gm15582 antisense antisense MGP_LPJ_T0102332.1 MGP_LPJ_G0040369.1 mouse_genomes_project 7 15196395 15197386 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0085545.1 MGP_LPJ_G0032722.1 mouse_genomes_project 7 112946179 112947124 - MGP_LPJ_P0085545 Olfr478 protein_coding protein_coding MGP_LPJ_T0084960.1 MGP_LPJ_G0032473.1 mouse_genomes_project 7 104453115 104505398 + MGP_LPJ_P0084960 Pgm2l1 protein_coding protein_coding MGP_LPJ_T0084961.1 MGP_LPJ_G0032473.1 mouse_genomes_project 7 104453409 104507461 + MGP_LPJ_P0084961 Pgm2l1 protein_coding nonsense_mediated_decay MGP_LPJ_T0084962.1 MGP_LPJ_G0032473.1 mouse_genomes_project 7 104453431 104508920 + MGP_LPJ_P0084962 Pgm2l1 protein_coding protein_coding MGP_LPJ_T0085373.1 MGP_LPJ_G0032645.1 mouse_genomes_project 7 109497789 109498966 - MGP_LPJ_P0085373 Olfr671 protein_coding protein_coding MGP_LPJ_T0082073.1 MGP_LPJ_G0031766.1 mouse_genomes_project 7 24077901 24130508 + MGP_LPJ_P0082073 Megf8 protein_coding protein_coding MGP_LPJ_T0082074.1 MGP_LPJ_G0031766.1 mouse_genomes_project 7 24110341 24130505 + Megf8 protein_coding retained_intron MGP_LPJ_T0082617.1 MGP_LPJ_G0031908.1 mouse_genomes_project 7 29529070 29537042 - MGP_LPJ_P0082617 Tbcb protein_coding protein_coding MGP_LPJ_T0082618.1 MGP_LPJ_G0031908.1 mouse_genomes_project 7 29529072 29532008 - Tbcb protein_coding processed_transcript MGP_LPJ_T0082619.1 MGP_LPJ_G0031908.1 mouse_genomes_project 7 29529076 29532069 - Tbcb protein_coding retained_intron MGP_LPJ_T0083526.1 MGP_LPJ_G0032122.1 mouse_genomes_project 7 46293562 46320782 - MGP_LPJ_P0083526 Ppfia3 protein_coding protein_coding MGP_LPJ_T0083527.1 MGP_LPJ_G0032122.1 mouse_genomes_project 7 46293563 46295206 - Ppfia3 protein_coding processed_transcript MGP_LPJ_T0083528.1 MGP_LPJ_G0032122.1 mouse_genomes_project 7 46293563 46321087 - MGP_LPJ_P0083528 Ppfia3 protein_coding protein_coding MGP_LPJ_T0083529.1 MGP_LPJ_G0032122.1 mouse_genomes_project 7 46293709 46321087 - Ppfia3 protein_coding retained_intron MGP_LPJ_T0083530.1 MGP_LPJ_G0032122.1 mouse_genomes_project 7 46293711 46314182 - MGP_LPJ_P0083530 Ppfia3 protein_coding protein_coding MGP_LPJ_T0083531.1 MGP_LPJ_G0032122.1 mouse_genomes_project 7 46293717 46295198 - Ppfia3 protein_coding processed_transcript MGP_LPJ_T0083532.1 MGP_LPJ_G0032122.1 mouse_genomes_project 7 46294258 46295595 - Ppfia3 protein_coding retained_intron MGP_LPJ_T0015713.1 MGP_LPJ_G0013804.1 mouse_genomes_project 7 33333926 33334685 + processed_pseudogene processed_pseudogene MGP_LPJ_T0086013.1 MGP_LPJ_G0032852.1 mouse_genomes_project 7 126374292 126406978 + MGP_LPJ_P0086013 Polr3e protein_coding protein_coding MGP_LPJ_T0086014.1 MGP_LPJ_G0032852.1 mouse_genomes_project 7 126374292 126406978 + MGP_LPJ_P0086014 Polr3e protein_coding protein_coding MGP_LPJ_T0083934.1 MGP_LPJ_G0032227.1 mouse_genomes_project 7 59353230 59782640 + MGP_LPJ_P0083934 Gabrb3 protein_coding protein_coding MGP_LPJ_T0083935.1 MGP_LPJ_G0032227.1 mouse_genomes_project 7 59531385 59781478 + MGP_LPJ_P0083935 Gabrb3 protein_coding protein_coding MGP_LPJ_T0083936.1 MGP_LPJ_G0032227.1 mouse_genomes_project 7 59532029 59782644 + MGP_LPJ_P0083936 Gabrb3 protein_coding protein_coding MGP_LPJ_T0083937.1 MGP_LPJ_G0032227.1 mouse_genomes_project 7 59532040 59715483 + Gabrb3 protein_coding retained_intron MGP_LPJ_T0083938.1 MGP_LPJ_G0032227.1 mouse_genomes_project 7 59532397 59770217 + MGP_LPJ_P0083938 Gabrb3 protein_coding protein_coding MGP_LPJ_T0083939.1 MGP_LPJ_G0032227.1 mouse_genomes_project 7 59741840 59770162 + Gabrb3 protein_coding retained_intron MGP_LPJ_T0087467.1 MGP_LPJ_G0033164.1 mouse_genomes_project 7 148910051 148910692 - MGP_LPJ_P0087467 protein_coding protein_coding MGP_LPJ_T0102457.1 MGP_LPJ_G0040493.1 mouse_genomes_project 7 109157645 109158017 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0083265.1 MGP_LPJ_G0032054.1 mouse_genomes_project 7 44776025 45057668 + MGP_LPJ_P0083265 protein_coding protein_coding MGP_LPJ_T0083266.1 MGP_LPJ_G0032054.1 mouse_genomes_project 7 44776095 45057220 + protein_coding retained_intron MGP_LPJ_T0083267.1 MGP_LPJ_G0032054.1 mouse_genomes_project 7 44776100 45057670 + MGP_LPJ_P0083267 protein_coding protein_coding MGP_LPJ_T0084377.1 MGP_LPJ_G0032316.1 mouse_genomes_project 7 83502193 83525294 + MGP_LPJ_P0084377 Prc1 protein_coding protein_coding MGP_LPJ_T0084378.1 MGP_LPJ_G0032316.1 mouse_genomes_project 7 83502194 83525294 + MGP_LPJ_P0084378 Prc1 protein_coding protein_coding MGP_LPJ_T0084379.1 MGP_LPJ_G0032316.1 mouse_genomes_project 7 83502208 83521781 + Prc1 protein_coding retained_intron MGP_LPJ_T0084380.1 MGP_LPJ_G0032316.1 mouse_genomes_project 7 83502216 83524619 + MGP_LPJ_P0084380 Prc1 protein_coding protein_coding MGP_LPJ_T0084381.1 MGP_LPJ_G0032316.1 mouse_genomes_project 7 83502217 83512015 + Prc1 protein_coding retained_intron MGP_LPJ_T0084382.1 MGP_LPJ_G0032316.1 mouse_genomes_project 7 83502222 83525286 + MGP_LPJ_P0084382 Prc1 protein_coding protein_coding MGP_LPJ_T0084383.1 MGP_LPJ_G0032316.1 mouse_genomes_project 7 83502248 83525289 + MGP_LPJ_P0084383 Prc1 protein_coding protein_coding MGP_LPJ_T0084384.1 MGP_LPJ_G0032316.1 mouse_genomes_project 7 83502256 83512205 + Prc1 protein_coding retained_intron MGP_LPJ_T0084385.1 MGP_LPJ_G0032316.1 mouse_genomes_project 7 83511978 83513541 + Prc1 protein_coding retained_intron MGP_LPJ_T0084386.1 MGP_LPJ_G0032316.1 mouse_genomes_project 7 83512312 83519916 + MGP_LPJ_P0084386 Prc1 protein_coding protein_coding MGP_LPJ_T0084387.1 MGP_LPJ_G0032316.1 mouse_genomes_project 7 83518420 83525292 + MGP_LPJ_P0084387 Prc1 protein_coding protein_coding MGP_LPJ_T0084388.1 MGP_LPJ_G0032316.1 mouse_genomes_project 7 83519880 83522529 + MGP_LPJ_P0084388 Prc1 protein_coding protein_coding MGP_LPJ_T0084389.1 MGP_LPJ_G0032316.1 mouse_genomes_project 7 83520136 83524552 + MGP_LPJ_P0084389 Prc1 protein_coding protein_coding MGP_LPJ_T0084390.1 MGP_LPJ_G0032316.1 mouse_genomes_project 7 83521342 83522732 + MGP_LPJ_P0084390 Prc1 protein_coding protein_coding MGP_LPJ_T0082157.1 MGP_LPJ_G0031789.1 mouse_genomes_project 7 25137551 25211204 - MGP_LPJ_P0082157 Nlrp9c protein_coding protein_coding MGP_LPJ_T0082158.1 MGP_LPJ_G0031789.1 mouse_genomes_project 7 25184924 25211209 - MGP_LPJ_P0082158 Nlrp9c protein_coding protein_coding MGP_LPJ_T0082159.1 MGP_LPJ_G0031789.1 mouse_genomes_project 7 25193729 25234036 - Nlrp9c protein_coding retained_intron MGP_LPJ_T0082160.1 MGP_LPJ_G0031789.1 mouse_genomes_project 7 25193729 25234032 - Nlrp9c protein_coding processed_transcript MGP_LPJ_T0082161.1 MGP_LPJ_G0031789.1 mouse_genomes_project 7 25209232 25234036 - Nlrp9c protein_coding retained_intron MGP_LPJ_T0087468.1 MGP_LPJ_G0033165.1 mouse_genomes_project 7 148921779 148922951 + MGP_LPJ_P0087468 protein_coding protein_coding MGP_LPJ_T0002241.1 MGP_LPJ_G0002150.1 mouse_genomes_project 7 37373690 37374497 - TEC TEC MGP_LPJ_T0081317.1 MGP_LPJ_G0031520.1 mouse_genomes_project 7 4357440 4364197 - MGP_LPJ_P0081317 Zfp954 protein_coding protein_coding MGP_LPJ_T0099746.1 MGP_LPJ_G0038009.1 mouse_genomes_project 7 144612387 144612494 - Gm25798 snRNA snRNA MGP_LPJ_T0081885.1 MGP_LPJ_G0031721.1 mouse_genomes_project 7 22808523 22815308 + MGP_LPJ_P0081885 Zfp114 protein_coding protein_coding MGP_LPJ_T0081886.1 MGP_LPJ_G0031721.1 mouse_genomes_project 7 22808549 22816928 + MGP_LPJ_P0081886 Zfp114 protein_coding protein_coding MGP_LPJ_T0081887.1 MGP_LPJ_G0031721.1 mouse_genomes_project 7 22810904 22817840 + MGP_LPJ_P0081887 Zfp114 protein_coding protein_coding MGP_LPJ_T0083171.1 MGP_LPJ_G0032020.1 mouse_genomes_project 7 44032775 44049925 - MGP_LPJ_P0083171 Zfp715 protein_coding protein_coding MGP_LPJ_T0083172.1 MGP_LPJ_G0032020.1 mouse_genomes_project 7 44033101 44049933 - MGP_LPJ_P0083172 Zfp715 protein_coding protein_coding MGP_LPJ_T0083173.1 MGP_LPJ_G0032020.1 mouse_genomes_project 7 44033101 44048166 - MGP_LPJ_P0083173 Zfp715 protein_coding protein_coding MGP_LPJ_T0083174.1 MGP_LPJ_G0032020.1 mouse_genomes_project 7 44033101 44049941 - MGP_LPJ_P0083174 Zfp715 protein_coding nonsense_mediated_decay MGP_LPJ_T0083175.1 MGP_LPJ_G0032020.1 mouse_genomes_project 7 44036530 44049773 - MGP_LPJ_P0083175 Zfp715 protein_coding protein_coding MGP_LPJ_T0083176.1 MGP_LPJ_G0032020.1 mouse_genomes_project 7 44038054 44049972 - Zfp715 protein_coding retained_intron MGP_LPJ_T0083177.1 MGP_LPJ_G0032020.1 mouse_genomes_project 7 44038188 44049741 - MGP_LPJ_P0083177 Zfp715 protein_coding protein_coding MGP_LPJ_T0081868.1 MGP_LPJ_G0031714.1 mouse_genomes_project 7 22217567 22221719 + MGP_LPJ_P0081868 Vmn1r172 protein_coding protein_coding MGP_LPJ_T0002320.1 MGP_LPJ_G0002228.1 mouse_genomes_project 7 127683088 127684095 - TEC TEC MGP_LPJ_T0102349.1 MGP_LPJ_G0040385.1 mouse_genomes_project 7 33074531 33074901 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0015702.1 MGP_LPJ_G0013793.1 mouse_genomes_project 7 26003392 26003750 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005242.1 MGP_LPJ_G0004458.1 mouse_genomes_project 7 47633326 47649890 + Gm15700 antisense antisense MGP_LPJ_T0087327.1 MGP_LPJ_G0033141.1 mouse_genomes_project 7 148018590 148044700 + MGP_LPJ_P0087327 Eps8l2 protein_coding protein_coding MGP_LPJ_T0087328.1 MGP_LPJ_G0033141.1 mouse_genomes_project 7 148018666 148044700 + Eps8l2 protein_coding retained_intron MGP_LPJ_T0087329.1 MGP_LPJ_G0033141.1 mouse_genomes_project 7 148018697 148035636 + Eps8l2 protein_coding processed_transcript MGP_LPJ_T0087330.1 MGP_LPJ_G0033141.1 mouse_genomes_project 7 148018714 148035634 + Eps8l2 protein_coding retained_intron MGP_LPJ_T0087331.1 MGP_LPJ_G0033141.1 mouse_genomes_project 7 148018716 148022701 + MGP_LPJ_P0087331 Eps8l2 protein_coding protein_coding MGP_LPJ_T0087332.1 MGP_LPJ_G0033141.1 mouse_genomes_project 7 148022366 148035771 + Eps8l2 protein_coding retained_intron MGP_LPJ_T0087333.1 MGP_LPJ_G0033141.1 mouse_genomes_project 7 148039691 148043095 + Eps8l2 protein_coding retained_intron MGP_LPJ_T0087334.1 MGP_LPJ_G0033141.1 mouse_genomes_project 7 148039898 148043414 + Eps8l2 protein_coding processed_transcript MGP_LPJ_T0087335.1 MGP_LPJ_G0033141.1 mouse_genomes_project 7 148041925 148043412 + Eps8l2 protein_coding processed_transcript MGP_LPJ_T0087336.1 MGP_LPJ_G0033141.1 mouse_genomes_project 7 148043216 148044347 + Eps8l2 protein_coding processed_transcript MGP_LPJ_T0085144.1 MGP_LPJ_G0032503.1 mouse_genomes_project 7 106311828 106356150 + MGP_LPJ_P0085144 Numa1 protein_coding protein_coding MGP_LPJ_T0085145.1 MGP_LPJ_G0032503.1 mouse_genomes_project 7 106312561 106356153 + MGP_LPJ_P0085145 Numa1 protein_coding unknown_likely_coding MGP_LPJ_T0085146.1 MGP_LPJ_G0032503.1 mouse_genomes_project 7 106341935 106356146 + MGP_LPJ_P0085146 Numa1 protein_coding protein_coding MGP_LPJ_T0083387.1 MGP_LPJ_G0032082.1 mouse_genomes_project 7 45580784 45592162 + MGP_LPJ_P0083387 Izumo2 protein_coding protein_coding MGP_LPJ_T0002268.1 MGP_LPJ_G0002177.1 mouse_genomes_project 7 66573819 66573968 + TEC TEC MGP_LPJ_T0085226.1 MGP_LPJ_G0032534.1 mouse_genomes_project 7 107120051 107121008 - MGP_LPJ_P0085226 Olfr33 protein_coding protein_coding MGP_LPJ_T0015734.1 MGP_LPJ_G0013825.1 mouse_genomes_project 7 41938821 41940423 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002332.1 MGP_LPJ_G0002240.1 mouse_genomes_project 7 132713632 132715383 + TEC TEC MGP_LPJ_T0085505.1 MGP_LPJ_G0032689.1 mouse_genomes_project 7 111783044 111786303 - MGP_LPJ_P0085505 Olfr702 protein_coding protein_coding MGP_LPJ_T0081346.1 MGP_LPJ_G0031544.1 mouse_genomes_project 7 9757952 9758948 - MGP_LPJ_P0081346 Vmn1r83 protein_coding protein_coding MGP_LPJ_T0083679.1 MGP_LPJ_G0032158.1 mouse_genomes_project 7 46861088 46899355 - MGP_LPJ_P0083679 Grin2d protein_coding protein_coding MGP_LPJ_T0083680.1 MGP_LPJ_G0032158.1 mouse_genomes_project 7 46898607 46904437 - MGP_LPJ_P0083680 Grin2d protein_coding protein_coding MGP_LPJ_T0005325.1 MGP_LPJ_G0004516.1 mouse_genomes_project 7 134067426 134069144 - Gm45108 antisense antisense MGP_LPJ_T0005280.1 MGP_LPJ_G0004484.1 mouse_genomes_project 7 100313624 100316106 - Gm15412 antisense antisense MGP_LPJ_T0100948.1 MGP_LPJ_G0039211.1 mouse_genomes_project 7 45076145 45076236 + Gm26247 snoRNA snoRNA MGP_LPJ_T0081779.1 MGP_LPJ_G0031682.1 mouse_genomes_project 7 17825204 17832876 + MGP_LPJ_P0081779 protein_coding protein_coding MGP_LPJ_T0083538.1 MGP_LPJ_G0032124.1 mouse_genomes_project 7 46330493 46349813 - MGP_LPJ_P0083538 Snrnp70 protein_coding protein_coding MGP_LPJ_T0083539.1 MGP_LPJ_G0032124.1 mouse_genomes_project 7 46330499 46338131 - MGP_LPJ_P0083539 Snrnp70 protein_coding protein_coding MGP_LPJ_T0083540.1 MGP_LPJ_G0032124.1 mouse_genomes_project 7 46330502 46349729 - Snrnp70 protein_coding retained_intron MGP_LPJ_T0083541.1 MGP_LPJ_G0032124.1 mouse_genomes_project 7 46330503 46349763 - Snrnp70 protein_coding retained_intron MGP_LPJ_T0083542.1 MGP_LPJ_G0032124.1 mouse_genomes_project 7 46331186 46346403 - MGP_LPJ_P0083542 Snrnp70 protein_coding nonsense_mediated_decay MGP_LPJ_T0083543.1 MGP_LPJ_G0032124.1 mouse_genomes_project 7 46335598 46338520 - Snrnp70 protein_coding retained_intron MGP_LPJ_T0083544.1 MGP_LPJ_G0032124.1 mouse_genomes_project 7 46337785 46348879 - Snrnp70 protein_coding retained_intron MGP_LPJ_T0083545.1 MGP_LPJ_G0032124.1 mouse_genomes_project 7 46337953 46341836 - Snrnp70 protein_coding retained_intron MGP_LPJ_T0083546.1 MGP_LPJ_G0032124.1 mouse_genomes_project 7 46338003 46349244 - MGP_LPJ_P0083546 Snrnp70 protein_coding nonsense_mediated_decay MGP_LPJ_T0083547.1 MGP_LPJ_G0032124.1 mouse_genomes_project 7 46338018 46349266 - MGP_LPJ_P0083547 Snrnp70 protein_coding protein_coding MGP_LPJ_T0083548.1 MGP_LPJ_G0032124.1 mouse_genomes_project 7 46341014 46348799 - Snrnp70 protein_coding retained_intron MGP_LPJ_T0083549.1 MGP_LPJ_G0032124.1 mouse_genomes_project 7 46341455 46349780 - MGP_LPJ_P0083549 Snrnp70 protein_coding protein_coding MGP_LPJ_T0083550.1 MGP_LPJ_G0032124.1 mouse_genomes_project 7 46341499 46346859 - Snrnp70 protein_coding processed_transcript MGP_LPJ_T0083551.1 MGP_LPJ_G0032124.1 mouse_genomes_project 7 46345072 46346964 - Snrnp70 protein_coding retained_intron MGP_LPJ_T0083552.1 MGP_LPJ_G0032124.1 mouse_genomes_project 7 46345905 46349628 - Snrnp70 protein_coding retained_intron MGP_LPJ_T0086982.1 MGP_LPJ_G0033037.1 mouse_genomes_project 7 139910907 139946558 + MGP_LPJ_P0086982 Edrf1 protein_coding protein_coding MGP_LPJ_T0086983.1 MGP_LPJ_G0033037.1 mouse_genomes_project 7 139911057 139945766 + MGP_LPJ_P0086983 Edrf1 protein_coding protein_coding MGP_LPJ_T0086984.1 MGP_LPJ_G0033037.1 mouse_genomes_project 7 139911225 139912760 + Edrf1 protein_coding retained_intron MGP_LPJ_T0086985.1 MGP_LPJ_G0033037.1 mouse_genomes_project 7 139930622 139935399 + MGP_LPJ_P0086985 Edrf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0086986.1 MGP_LPJ_G0033037.1 mouse_genomes_project 7 139939443 139945516 + MGP_LPJ_P0086986 Edrf1 protein_coding protein_coding MGP_LPJ_T0086987.1 MGP_LPJ_G0033037.1 mouse_genomes_project 7 139940723 139945057 + Edrf1 protein_coding retained_intron MGP_LPJ_T0085498.1 MGP_LPJ_G0032683.1 mouse_genomes_project 7 111671142 111673756 - MGP_LPJ_P0085498 protein_coding protein_coding MGP_LPJ_T0087162.1 MGP_LPJ_G0033083.1 mouse_genomes_project 7 146782505 146786754 - MGP_LPJ_P0087162 Sprn protein_coding protein_coding MGP_LPJ_T0087163.1 MGP_LPJ_G0033083.1 mouse_genomes_project 7 146782841 146785419 - Sprn protein_coding processed_transcript MGP_LPJ_T0087580.1 MGP_LPJ_G0033184.1 mouse_genomes_project 7 149852459 149867648 + MGP_LPJ_P0087580 Cd81 protein_coding protein_coding MGP_LPJ_T0087581.1 MGP_LPJ_G0033184.1 mouse_genomes_project 7 149852514 149865327 + Cd81 protein_coding retained_intron MGP_LPJ_T0087582.1 MGP_LPJ_G0033184.1 mouse_genomes_project 7 149858292 149866876 + Cd81 protein_coding processed_transcript MGP_LPJ_T0087583.1 MGP_LPJ_G0033184.1 mouse_genomes_project 7 149865914 149867319 + Cd81 protein_coding retained_intron MGP_LPJ_T0002347.1 MGP_LPJ_G0002255.1 mouse_genomes_project 7 150165402 150166804 + TEC TEC MGP_LPJ_T0086629.1 MGP_LPJ_G0032967.1 mouse_genomes_project 7 133565968 133584524 - MGP_LPJ_P0086629 Ctf2 protein_coding protein_coding MGP_LPJ_T0086630.1 MGP_LPJ_G0032967.1 mouse_genomes_project 7 133565968 133573289 - MGP_LPJ_P0086630 Ctf2 protein_coding protein_coding MGP_LPJ_T0082030.1 MGP_LPJ_G0031757.1 mouse_genomes_project 7 23825739 23872837 - MGP_LPJ_P0082030 Pou2f2 protein_coding protein_coding MGP_LPJ_T0082031.1 MGP_LPJ_G0031757.1 mouse_genomes_project 7 23832034 23872837 - MGP_LPJ_P0082031 Pou2f2 protein_coding protein_coding MGP_LPJ_T0082032.1 MGP_LPJ_G0031757.1 mouse_genomes_project 7 23832078 23872837 - MGP_LPJ_P0082032 Pou2f2 protein_coding protein_coding MGP_LPJ_T0082033.1 MGP_LPJ_G0031757.1 mouse_genomes_project 7 23832078 23872826 - MGP_LPJ_P0082033 Pou2f2 protein_coding protein_coding MGP_LPJ_T0082034.1 MGP_LPJ_G0031757.1 mouse_genomes_project 7 23832235 23860800 - MGP_LPJ_P0082034 Pou2f2 protein_coding protein_coding MGP_LPJ_T0082035.1 MGP_LPJ_G0031757.1 mouse_genomes_project 7 23832806 23872861 - MGP_LPJ_P0082035 Pou2f2 protein_coding protein_coding MGP_LPJ_T0082036.1 MGP_LPJ_G0031757.1 mouse_genomes_project 7 23839421 23859927 - MGP_LPJ_P0082036 Pou2f2 protein_coding protein_coding MGP_LPJ_T0082037.1 MGP_LPJ_G0031757.1 mouse_genomes_project 7 23859686 23905013 - Pou2f2 protein_coding retained_intron MGP_LPJ_T0015769.1 MGP_LPJ_G0013860.1 mouse_genomes_project 7 60801358 60802504 - processed_pseudogene processed_pseudogene MGP_LPJ_T0084198.1 MGP_LPJ_G0032281.1 mouse_genomes_project 7 78780226 78810402 + MGP_LPJ_P0084198 Klhl25 protein_coding protein_coding MGP_LPJ_T0084199.1 MGP_LPJ_G0032281.1 mouse_genomes_project 7 78780254 78810401 + MGP_LPJ_P0084199 Klhl25 protein_coding protein_coding MGP_LPJ_T0084200.1 MGP_LPJ_G0032281.1 mouse_genomes_project 7 78780257 78801289 + MGP_LPJ_P0084200 Klhl25 protein_coding protein_coding MGP_LPJ_T0084201.1 MGP_LPJ_G0032281.1 mouse_genomes_project 7 78780280 78801285 + MGP_LPJ_P0084201 Klhl25 protein_coding protein_coding MGP_LPJ_T0084202.1 MGP_LPJ_G0032281.1 mouse_genomes_project 7 78780313 78809796 + Klhl25 protein_coding processed_transcript MGP_LPJ_T0084203.1 MGP_LPJ_G0032281.1 mouse_genomes_project 7 78780357 78799425 + MGP_LPJ_P0084203 Klhl25 protein_coding protein_coding MGP_LPJ_T0085737.1 MGP_LPJ_G0032791.1 mouse_genomes_project 7 118454925 118511856 - MGP_LPJ_P0085737 Btbd10 protein_coding protein_coding MGP_LPJ_T0085738.1 MGP_LPJ_G0032791.1 mouse_genomes_project 7 118454936 118488507 - MGP_LPJ_P0085738 Btbd10 protein_coding protein_coding MGP_LPJ_T0085739.1 MGP_LPJ_G0032791.1 mouse_genomes_project 7 118454945 118493249 - MGP_LPJ_P0085739 Btbd10 protein_coding nonsense_mediated_decay MGP_LPJ_T0085740.1 MGP_LPJ_G0032791.1 mouse_genomes_project 7 118467412 118471455 - Btbd10 protein_coding retained_intron MGP_LPJ_T0085741.1 MGP_LPJ_G0032791.1 mouse_genomes_project 7 118511133 118511853 - Btbd10 protein_coding processed_transcript MGP_LPJ_T0005344.1 MGP_LPJ_G0004532.1 mouse_genomes_project 7 151253875 151292205 - Gm14372 antisense antisense MGP_LPJ_T0101599.1 MGP_LPJ_G0039680.1 mouse_genomes_project 7 12211035 12270449 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0085547.1 MGP_LPJ_G0032724.1 mouse_genomes_project 7 112979276 112980305 - MGP_LPJ_P0085547 Olfr480 protein_coding protein_coding MGP_LPJ_T0010892.1 MGP_LPJ_G0009010.1 mouse_genomes_project 7 48211832 48211891 - Mir7056 miRNA miRNA MGP_LPJ_T0085237.1 MGP_LPJ_G0032544.1 mouse_genomes_project 7 107355064 107356105 + MGP_LPJ_P0085237 Olfr574 protein_coding protein_coding MGP_LPJ_T0086309.1 MGP_LPJ_G0032910.1 mouse_genomes_project 7 132450582 132451869 + Bola2 protein_coding retained_intron MGP_LPJ_T0086310.1 MGP_LPJ_G0032910.1 mouse_genomes_project 7 132450617 132452240 + MGP_LPJ_P0086310 Bola2 protein_coding protein_coding MGP_LPJ_T0086311.1 MGP_LPJ_G0032910.1 mouse_genomes_project 7 132451147 132451875 + Bola2 protein_coding processed_transcript MGP_LPJ_T0086312.1 MGP_LPJ_G0032910.1 mouse_genomes_project 7 132451154 132451879 + MGP_LPJ_P0086312 Bola2 protein_coding protein_coding MGP_LPJ_T0086313.1 MGP_LPJ_G0032910.1 mouse_genomes_project 7 132451184 132454950 + Bola2 protein_coding retained_intron MGP_LPJ_T0002222.1 MGP_LPJ_G0002131.1 mouse_genomes_project 7 14890686 14892373 - TEC TEC MGP_LPJ_T0087005.1 MGP_LPJ_G0033041.1 mouse_genomes_project 7 139997657 140062073 - MGP_LPJ_P0087005 Dhx32 protein_coding protein_coding MGP_LPJ_T0087006.1 MGP_LPJ_G0033041.1 mouse_genomes_project 7 139997661 140041873 - Dhx32 protein_coding processed_transcript MGP_LPJ_T0087007.1 MGP_LPJ_G0033041.1 mouse_genomes_project 7 139997825 140068080 - MGP_LPJ_P0087007 Dhx32 protein_coding protein_coding MGP_LPJ_T0087008.1 MGP_LPJ_G0033041.1 mouse_genomes_project 7 139997943 140061999 - MGP_LPJ_P0087008 Dhx32 protein_coding protein_coding MGP_LPJ_T0087009.1 MGP_LPJ_G0033041.1 mouse_genomes_project 7 139999759 140009753 - Dhx32 protein_coding processed_transcript MGP_LPJ_T0087010.1 MGP_LPJ_G0033041.1 mouse_genomes_project 7 140029565 140041076 - Dhx32 protein_coding processed_transcript MGP_LPJ_T0087011.1 MGP_LPJ_G0033041.1 mouse_genomes_project 7 140029865 140041433 - MGP_LPJ_P0087011 Dhx32 protein_coding protein_coding MGP_LPJ_T0087012.1 MGP_LPJ_G0033041.1 mouse_genomes_project 7 140030010 140061957 - MGP_LPJ_P0087012 Dhx32 protein_coding protein_coding MGP_LPJ_T0087013.1 MGP_LPJ_G0033041.1 mouse_genomes_project 7 140041281 140061779 - MGP_LPJ_P0087013 Dhx32 protein_coding protein_coding MGP_LPJ_T0085563.1 MGP_LPJ_G0032740.1 mouse_genomes_project 7 113515056 113516013 - MGP_LPJ_P0085563 protein_coding protein_coding MGP_LPJ_T0084530.1 MGP_LPJ_G0032338.1 mouse_genomes_project 7 84869786 84898056 + MGP_LPJ_P0084530 Whamm protein_coding protein_coding MGP_LPJ_T0086408.1 MGP_LPJ_G0032922.1 mouse_genomes_project 7 132634537 132637943 + MGP_LPJ_P0086408 Hirip3 protein_coding protein_coding MGP_LPJ_T0086409.1 MGP_LPJ_G0032922.1 mouse_genomes_project 7 132635004 132635970 + Hirip3 protein_coding retained_intron MGP_LPJ_T0086410.1 MGP_LPJ_G0032922.1 mouse_genomes_project 7 132635029 132636291 + Hirip3 protein_coding retained_intron MGP_LPJ_T0086411.1 MGP_LPJ_G0032922.1 mouse_genomes_project 7 132635032 132636737 + Hirip3 protein_coding processed_transcript MGP_LPJ_T0086412.1 MGP_LPJ_G0032922.1 mouse_genomes_project 7 132635046 132635997 + MGP_LPJ_P0086412 Hirip3 protein_coding protein_coding MGP_LPJ_T0086413.1 MGP_LPJ_G0032922.1 mouse_genomes_project 7 132636408 132637094 + Hirip3 protein_coding retained_intron MGP_LPJ_T0086414.1 MGP_LPJ_G0032922.1 mouse_genomes_project 7 132636981 132637484 + Hirip3 protein_coding retained_intron MGP_LPJ_T0084453.1 MGP_LPJ_G0032323.1 mouse_genomes_project 7 83805012 83915115 - MGP_LPJ_P0084453 Crtc3 protein_coding protein_coding MGP_LPJ_T0084454.1 MGP_LPJ_G0032323.1 mouse_genomes_project 7 83813448 83831591 - MGP_LPJ_P0084454 Crtc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0084455.1 MGP_LPJ_G0032323.1 mouse_genomes_project 7 83816341 83821072 - Crtc3 protein_coding retained_intron MGP_LPJ_T0084456.1 MGP_LPJ_G0032323.1 mouse_genomes_project 7 83816403 83851274 - MGP_LPJ_P0084456 Crtc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0084457.1 MGP_LPJ_G0032323.1 mouse_genomes_project 7 83839738 83851355 - Crtc3 protein_coding retained_intron MGP_LPJ_T0084458.1 MGP_LPJ_G0032323.1 mouse_genomes_project 7 83897064 83915115 - Crtc3 protein_coding retained_intron MGP_LPJ_T0082509.1 MGP_LPJ_G0031879.1 mouse_genomes_project 7 28432697 28444790 - MGP_LPJ_P0082509 Kcnk6 protein_coding protein_coding MGP_LPJ_T0082586.1 MGP_LPJ_G0031898.1 mouse_genomes_project 7 29322281 29328643 - MGP_LPJ_P0082586 Zfp14 protein_coding protein_coding MGP_LPJ_T0083188.1 MGP_LPJ_G0032024.1 mouse_genomes_project 7 44180288 44188601 + MGP_LPJ_P0083188 protein_coding nonsense_mediated_decay MGP_LPJ_T0084002.1 MGP_LPJ_G0032242.1 mouse_genomes_project 7 66729477 66756801 - MGP_LPJ_P0084002 Fan1 protein_coding protein_coding MGP_LPJ_T0084003.1 MGP_LPJ_G0032242.1 mouse_genomes_project 7 66744212 66756094 - Fan1 protein_coding retained_intron MGP_LPJ_T0084004.1 MGP_LPJ_G0032242.1 mouse_genomes_project 7 66752873 66756816 - Fan1 protein_coding retained_intron MGP_LPJ_T0084005.1 MGP_LPJ_G0032242.1 mouse_genomes_project 7 66753632 66756762 - Fan1 protein_coding retained_intron MGP_LPJ_T0102429.1 MGP_LPJ_G0040465.1 mouse_genomes_project 7 89581101 89591745 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0005282.1 MGP_LPJ_G0004486.1 mouse_genomes_project 7 100795494 100805611 - Gm15413 antisense antisense MGP_LPJ_T0009035.1 MGP_LPJ_G0007276.1 mouse_genomes_project 7 132569501 132577675 - lincRNA lincRNA MGP_LPJ_T0083178.1 MGP_LPJ_G0032021.1 mouse_genomes_project 7 44090275 44098383 + Siglecf protein_coding retained_intron MGP_LPJ_T0083179.1 MGP_LPJ_G0032021.1 mouse_genomes_project 7 44090275 44098385 + MGP_LPJ_P0083179 Siglecf protein_coding protein_coding MGP_LPJ_T0083180.1 MGP_LPJ_G0032021.1 mouse_genomes_project 7 44090317 44090778 + Siglecf protein_coding processed_transcript MGP_LPJ_T0083181.1 MGP_LPJ_G0032021.1 mouse_genomes_project 7 44090342 44098446 + MGP_LPJ_P0083181 Siglecf protein_coding protein_coding MGP_LPJ_T0083182.1 MGP_LPJ_G0032021.1 mouse_genomes_project 7 44090456 44098204 + MGP_LPJ_P0083182 Siglecf protein_coding protein_coding MGP_LPJ_T0083183.1 MGP_LPJ_G0032021.1 mouse_genomes_project 7 44090482 44095533 + MGP_LPJ_P0083183 Siglecf protein_coding protein_coding MGP_LPJ_T0085384.1 MGP_LPJ_G0032656.1 mouse_genomes_project 7 109922970 109939471 + MGP_LPJ_P0085384 protein_coding protein_coding MGP_LPJ_T0081777.1 MGP_LPJ_G0031681.1 mouse_genomes_project 7 17747796 17789664 - MGP_LPJ_P0081777 Mark4 protein_coding unknown_likely_coding MGP_LPJ_T0081778.1 MGP_LPJ_G0031681.1 mouse_genomes_project 7 17748738 17789664 - MGP_LPJ_P0081778 Mark4 protein_coding protein_coding MGP_LPJ_T0087654.1 MGP_LPJ_G0033202.1 mouse_genomes_project 7 150888886 151309721 + MGP_LPJ_P0087654 Shank2 protein_coding protein_coding MGP_LPJ_T0087655.1 MGP_LPJ_G0033202.1 mouse_genomes_project 7 150918254 151022349 + MGP_LPJ_P0087655 Shank2 protein_coding unknown_likely_coding MGP_LPJ_T0087656.1 MGP_LPJ_G0033202.1 mouse_genomes_project 7 150918254 151022207 + MGP_LPJ_P0087656 Shank2 protein_coding unknown_likely_coding MGP_LPJ_T0087657.1 MGP_LPJ_G0033202.1 mouse_genomes_project 7 151065821 151309721 + MGP_LPJ_P0087657 Shank2 protein_coding protein_coding MGP_LPJ_T0087658.1 MGP_LPJ_G0033202.1 mouse_genomes_project 7 151174815 151307915 + MGP_LPJ_P0087658 Shank2 protein_coding protein_coding MGP_LPJ_T0087659.1 MGP_LPJ_G0033202.1 mouse_genomes_project 7 151174869 151309709 + Shank2 protein_coding retained_intron MGP_LPJ_T0087660.1 MGP_LPJ_G0033202.1 mouse_genomes_project 7 151303082 151305904 + Shank2 protein_coding processed_transcript MGP_LPJ_T0083572.1 MGP_LPJ_G0032133.1 mouse_genomes_project 7 46451687 46498142 + MGP_LPJ_P0083572 Tulp2 protein_coding protein_coding MGP_LPJ_T0083573.1 MGP_LPJ_G0032133.1 mouse_genomes_project 7 46451688 46497595 + MGP_LPJ_P0083573 Tulp2 protein_coding protein_coding MGP_LPJ_T0083574.1 MGP_LPJ_G0032133.1 mouse_genomes_project 7 46451789 46497597 + MGP_LPJ_P0083574 Tulp2 protein_coding protein_coding MGP_LPJ_T0083584.1 MGP_LPJ_G0032133.1 mouse_genomes_project 7 46487816 46497809 + MGP_LPJ_P0083584 Tulp2 protein_coding protein_coding MGP_LPJ_T0083585.1 MGP_LPJ_G0032133.1 mouse_genomes_project 7 46487834 46497602 + MGP_LPJ_P0083585 Tulp2 protein_coding protein_coding MGP_LPJ_T0083586.1 MGP_LPJ_G0032133.1 mouse_genomes_project 7 46488691 46490798 + MGP_LPJ_P0083586 Tulp2 protein_coding protein_coding MGP_LPJ_T0083587.1 MGP_LPJ_G0032133.1 mouse_genomes_project 7 46488712 46497597 + MGP_LPJ_P0083587 Tulp2 protein_coding protein_coding MGP_LPJ_T0083588.1 MGP_LPJ_G0032133.1 mouse_genomes_project 7 46488716 46493171 + MGP_LPJ_P0083588 Tulp2 protein_coding protein_coding MGP_LPJ_T0083589.1 MGP_LPJ_G0032133.1 mouse_genomes_project 7 46488747 46498847 + MGP_LPJ_P0083589 Tulp2 protein_coding protein_coding MGP_LPJ_T0083590.1 MGP_LPJ_G0032133.1 mouse_genomes_project 7 46489918 46490431 + Tulp2 protein_coding processed_transcript MGP_LPJ_T0086249.1 MGP_LPJ_G0032900.1 mouse_genomes_project 7 132233137 132236532 + MGP_LPJ_P0086249 protein_coding protein_coding MGP_LPJ_T0005248.1 MGP_LPJ_G0004462.1 mouse_genomes_project 7 66713015 66728742 - antisense antisense MGP_LPJ_T0099743.1 MGP_LPJ_G0038006.1 mouse_genomes_project 7 133933882 133934038 - Gm22809 snRNA snRNA MGP_LPJ_T0085972.1 MGP_LPJ_G0032841.1 mouse_genomes_project 7 125534728 125547940 - MGP_LPJ_P0085972 Zp2 protein_coding protein_coding MGP_LPJ_T0015812.1 MGP_LPJ_G0013903.1 mouse_genomes_project 7 98493007 98493398 - processed_pseudogene processed_pseudogene MGP_LPJ_T0085367.1 MGP_LPJ_G0032639.1 mouse_genomes_project 7 109406838 109407789 + MGP_LPJ_P0085367 Olfr665 protein_coding protein_coding MGP_LPJ_T0082310.1 MGP_LPJ_G0031824.1 mouse_genomes_project 7 26710547 26726806 + MGP_LPJ_P0082310 protein_coding protein_coding MGP_LPJ_T0082315.1 MGP_LPJ_G0031824.1 mouse_genomes_project 7 26713850 26724389 + MGP_LPJ_P0082315 protein_coding protein_coding MGP_LPJ_T0018361.1 MGP_LPJ_G0015605.1 mouse_genomes_project 7 123547397 123549091 + 4930583K01Rik processed_transcript processed_transcript MGP_LPJ_T0086726.1 MGP_LPJ_G0032985.1 mouse_genomes_project 7 133847847 133854703 - MGP_LPJ_P0086726 Pycard protein_coding protein_coding MGP_LPJ_T0086727.1 MGP_LPJ_G0032985.1 mouse_genomes_project 7 133849781 133854363 - MGP_LPJ_P0086727 Pycard protein_coding protein_coding MGP_LPJ_T0081475.1 MGP_LPJ_G0031592.1 mouse_genomes_project 7 13768612 13789076 - MGP_LPJ_P0081475 Crx protein_coding protein_coding MGP_LPJ_T0081476.1 MGP_LPJ_G0031592.1 mouse_genomes_project 7 13768613 13779751 - MGP_LPJ_P0081476 Crx protein_coding protein_coding MGP_LPJ_T0081477.1 MGP_LPJ_G0031592.1 mouse_genomes_project 7 13769891 13788980 - Crx protein_coding processed_transcript MGP_LPJ_T0081478.1 MGP_LPJ_G0031592.1 mouse_genomes_project 7 13769891 13788952 - MGP_LPJ_P0081478 Crx protein_coding protein_coding MGP_LPJ_T0081479.1 MGP_LPJ_G0031592.1 mouse_genomes_project 7 13770721 13778769 - MGP_LPJ_P0081479 Crx protein_coding protein_coding MGP_LPJ_T0005203.1 MGP_LPJ_G0004430.1 mouse_genomes_project 7 28335586 28338965 - antisense antisense MGP_LPJ_T0015856.1 MGP_LPJ_G0013947.1 mouse_genomes_project 7 128015665 128015906 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018287.1 MGP_LPJ_G0015578.1 mouse_genomes_project 7 29957536 29985973 - Gm21982 processed_transcript retained_intron MGP_LPJ_T0084579.1 MGP_LPJ_G0032351.1 mouse_genomes_project 7 86217151 86221421 + MGP_LPJ_P0084579 Mex3b protein_coding protein_coding MGP_LPJ_T0081259.1 MGP_LPJ_G0031496.1 mouse_genomes_project 7 3129747 3133009 - MGP_LPJ_P0081259 Vmn1r65 protein_coding protein_coding MGP_LPJ_T0085565.1 MGP_LPJ_G0032742.1 mouse_genomes_project 7 113589804 113590755 + MGP_LPJ_P0085565 Olfr507 protein_coding protein_coding MGP_LPJ_T0085743.1 MGP_LPJ_G0032793.1 mouse_genomes_project 7 118657965 118719104 + MGP_LPJ_P0085743 Far1 protein_coding protein_coding MGP_LPJ_T0085744.1 MGP_LPJ_G0032793.1 mouse_genomes_project 7 118657992 118698102 + Far1 protein_coding retained_intron MGP_LPJ_T0085745.1 MGP_LPJ_G0032793.1 mouse_genomes_project 7 118657992 118695178 + MGP_LPJ_P0085745 Far1 protein_coding protein_coding MGP_LPJ_T0085746.1 MGP_LPJ_G0032793.1 mouse_genomes_project 7 118657992 118719104 + MGP_LPJ_P0085746 Far1 protein_coding protein_coding MGP_LPJ_T0085747.1 MGP_LPJ_G0032793.1 mouse_genomes_project 7 118657993 118718051 + MGP_LPJ_P0085747 Far1 protein_coding protein_coding MGP_LPJ_T0085748.1 MGP_LPJ_G0032793.1 mouse_genomes_project 7 118658008 118697637 + MGP_LPJ_P0085748 Far1 protein_coding protein_coding MGP_LPJ_T0085749.1 MGP_LPJ_G0032793.1 mouse_genomes_project 7 118658012 118672522 + Far1 protein_coding retained_intron MGP_LPJ_T0085750.1 MGP_LPJ_G0032793.1 mouse_genomes_project 7 118658229 118686987 + MGP_LPJ_P0085750 Far1 protein_coding protein_coding MGP_LPJ_T0085751.1 MGP_LPJ_G0032793.1 mouse_genomes_project 7 118695055 118700740 + Far1 protein_coding retained_intron MGP_LPJ_T0085752.1 MGP_LPJ_G0032793.1 mouse_genomes_project 7 118708507 118715743 + Far1 protein_coding retained_intron MGP_LPJ_T0085753.1 MGP_LPJ_G0032793.1 mouse_genomes_project 7 118713692 118715798 + Far1 protein_coding retained_intron MGP_LPJ_T0005302.1 MGP_LPJ_G0004500.1 mouse_genomes_project 7 121557463 121558345 + antisense antisense MGP_LPJ_T0005303.1 MGP_LPJ_G0004500.1 mouse_genomes_project 7 121557470 121563522 + antisense antisense MGP_LPJ_T0005304.1 MGP_LPJ_G0004500.1 mouse_genomes_project 7 121559236 121563842 + antisense antisense MGP_LPJ_T0081715.1 MGP_LPJ_G0031666.1 mouse_genomes_project 7 17459114 17468985 - MGP_LPJ_P0081715 Gipr protein_coding protein_coding MGP_LPJ_T0081716.1 MGP_LPJ_G0031666.1 mouse_genomes_project 7 17459117 17468985 - Gipr protein_coding retained_intron MGP_LPJ_T0081717.1 MGP_LPJ_G0031666.1 mouse_genomes_project 7 17465145 17468985 - MGP_LPJ_P0081717 Gipr protein_coding nonsense_mediated_decay MGP_LPJ_T0081718.1 MGP_LPJ_G0031666.1 mouse_genomes_project 7 17465312 17467948 - Gipr protein_coding retained_intron MGP_LPJ_T0084900.1 MGP_LPJ_G0032452.1 mouse_genomes_project 7 102973070 103234101 - MGP_LPJ_P0084900 Uvrag protein_coding protein_coding MGP_LPJ_T0084699.1 MGP_LPJ_G0032409.1 mouse_genomes_project 7 93596644 93625740 - MGP_LPJ_P0084699 Eed protein_coding protein_coding MGP_LPJ_T0084700.1 MGP_LPJ_G0032409.1 mouse_genomes_project 7 93621528 93625327 - Eed protein_coding processed_transcript MGP_LPJ_T0084683.1 MGP_LPJ_G0032403.1 mouse_genomes_project 7 93049547 93055292 + MGP_LPJ_P0084683 Fzd4 protein_coding protein_coding MGP_LPJ_T0010915.1 MGP_LPJ_G0009033.1 mouse_genomes_project 7 64349182 64349270 - Gm24923 miRNA miRNA MGP_LPJ_T0009006.1 MGP_LPJ_G0007258.1 mouse_genomes_project 7 120128622 120134998 - Gm45020 lincRNA lincRNA MGP_LPJ_T0008895.1 MGP_LPJ_G0007184.1 mouse_genomes_project 7 66395610 66402071 - Gm45054 lincRNA lincRNA MGP_LPJ_T0009034.1 MGP_LPJ_G0007275.1 mouse_genomes_project 7 132501896 132503448 + 4930448A20Rik lincRNA lincRNA MGP_LPJ_T0081965.1 MGP_LPJ_G0031742.1 mouse_genomes_project 7 23366811 23370906 - MGP_LPJ_P0081965 Tex101 protein_coding protein_coding MGP_LPJ_T0010910.1 MGP_LPJ_G0009028.1 mouse_genomes_project 7 64093085 64093177 - Mir344c miRNA miRNA MGP_LPJ_T0015710.1 MGP_LPJ_G0013801.1 mouse_genomes_project 7 32898491 32898972 + processed_pseudogene processed_pseudogene MGP_LPJ_T0083924.1 MGP_LPJ_G0032224.1 mouse_genomes_project 7 58104828 58399954 + MGP_LPJ_P0083924 Oca2 protein_coding protein_coding MGP_LPJ_T0083925.1 MGP_LPJ_G0032224.1 mouse_genomes_project 7 58104829 58120036 + MGP_LPJ_P0083925 Oca2 protein_coding protein_coding MGP_LPJ_T0083926.1 MGP_LPJ_G0032224.1 mouse_genomes_project 7 58104845 58399701 + MGP_LPJ_P0083926 Oca2 protein_coding nonsense_mediated_decay MGP_LPJ_T0083927.1 MGP_LPJ_G0032224.1 mouse_genomes_project 7 58104849 58141430 + MGP_LPJ_P0083927 Oca2 protein_coding protein_coding MGP_LPJ_T0083928.1 MGP_LPJ_G0032224.1 mouse_genomes_project 7 58104876 58399949 + MGP_LPJ_P0083928 Oca2 protein_coding nonsense_mediated_decay MGP_LPJ_T0083929.1 MGP_LPJ_G0032224.1 mouse_genomes_project 7 58170745 58185598 + Oca2 protein_coding processed_transcript MGP_LPJ_T0008936.1 MGP_LPJ_G0007216.1 mouse_genomes_project 7 76476241 76476798 - lincRNA lincRNA MGP_LPJ_T0008871.1 MGP_LPJ_G0007166.1 mouse_genomes_project 7 40279453 40289015 + 4933404I11Rik lincRNA lincRNA MGP_LPJ_T0015798.1 MGP_LPJ_G0013889.1 mouse_genomes_project 7 84431012 84431360 - processed_pseudogene processed_pseudogene MGP_LPJ_T0081860.1 MGP_LPJ_G0031707.1 mouse_genomes_project 7 18405995 18451583 + MGP_LPJ_P0081860 Nlrp9b protein_coding protein_coding MGP_LPJ_T0081861.1 MGP_LPJ_G0031707.1 mouse_genomes_project 7 18415643 18451528 + MGP_LPJ_P0081861 Nlrp9b protein_coding protein_coding MGP_LPJ_T0087678.1 MGP_LPJ_G0033206.1 mouse_genomes_project 7 151481237 151644594 - MGP_LPJ_P0087678 Ano1 protein_coding protein_coding MGP_LPJ_T0087679.1 MGP_LPJ_G0033206.1 mouse_genomes_project 7 151481237 151644571 - MGP_LPJ_P0087679 Ano1 protein_coding protein_coding MGP_LPJ_T0087680.1 MGP_LPJ_G0033206.1 mouse_genomes_project 7 151481241 151644620 - MGP_LPJ_P0087680 Ano1 protein_coding protein_coding MGP_LPJ_T0087681.1 MGP_LPJ_G0033206.1 mouse_genomes_project 7 151488133 151504046 - Ano1 protein_coding retained_intron MGP_LPJ_T0087682.1 MGP_LPJ_G0033206.1 mouse_genomes_project 7 151520023 151578042 - MGP_LPJ_P0087682 Ano1 protein_coding protein_coding MGP_LPJ_T0087683.1 MGP_LPJ_G0033206.1 mouse_genomes_project 7 151559202 151658000 - MGP_LPJ_P0087683 Ano1 protein_coding protein_coding MGP_LPJ_T0087684.1 MGP_LPJ_G0033206.1 mouse_genomes_project 7 151562794 151578039 - Ano1 protein_coding retained_intron MGP_LPJ_T0087685.1 MGP_LPJ_G0033206.1 mouse_genomes_project 7 151564300 151587513 - MGP_LPJ_P0087685 Ano1 protein_coding protein_coding MGP_LPJ_T0087317.1 MGP_LPJ_G0033139.1 mouse_genomes_project 7 147976810 148007445 - MGP_LPJ_P0087317 Deaf1 protein_coding protein_coding MGP_LPJ_T0084269.1 MGP_LPJ_G0032293.1 mouse_genomes_project 7 82508501 82520546 - MGP_LPJ_P0084269 Rlbp1 protein_coding protein_coding MGP_LPJ_T0084270.1 MGP_LPJ_G0032293.1 mouse_genomes_project 7 82508502 82520457 - MGP_LPJ_P0084270 Rlbp1 protein_coding protein_coding MGP_LPJ_T0084271.1 MGP_LPJ_G0032293.1 mouse_genomes_project 7 82509159 82511335 - Rlbp1 protein_coding retained_intron MGP_LPJ_T0084272.1 MGP_LPJ_G0032293.1 mouse_genomes_project 7 82509535 82517610 - MGP_LPJ_P0084272 Rlbp1 protein_coding protein_coding MGP_LPJ_T0084273.1 MGP_LPJ_G0032293.1 mouse_genomes_project 7 82511015 82520039 - MGP_LPJ_P0084273 Rlbp1 protein_coding protein_coding MGP_LPJ_T0084274.1 MGP_LPJ_G0032293.1 mouse_genomes_project 7 82513621 82520103 - MGP_LPJ_P0084274 Rlbp1 protein_coding protein_coding MGP_LPJ_T0084275.1 MGP_LPJ_G0032293.1 mouse_genomes_project 7 82515293 82519972 - MGP_LPJ_P0084275 Rlbp1 protein_coding protein_coding MGP_LPJ_T0084276.1 MGP_LPJ_G0032293.1 mouse_genomes_project 7 82517355 82520410 - MGP_LPJ_P0084276 Rlbp1 protein_coding protein_coding MGP_LPJ_T0081837.1 MGP_LPJ_G0031699.1 mouse_genomes_project 7 18136765 18149640 - Cblc protein_coding processed_transcript MGP_LPJ_T0081838.1 MGP_LPJ_G0031699.1 mouse_genomes_project 7 18137503 18146194 - Cblc protein_coding processed_transcript MGP_LPJ_T0081839.1 MGP_LPJ_G0031699.1 mouse_genomes_project 7 18137596 18158884 - MGP_LPJ_P0081839 Cblc protein_coding protein_coding MGP_LPJ_T0081840.1 MGP_LPJ_G0031699.1 mouse_genomes_project 7 18137596 18158900 - MGP_LPJ_P0081840 Cblc protein_coding protein_coding MGP_LPJ_T0081841.1 MGP_LPJ_G0031699.1 mouse_genomes_project 7 18146948 18152878 - Cblc protein_coding processed_transcript MGP_LPJ_T0081842.1 MGP_LPJ_G0031699.1 mouse_genomes_project 7 18151008 18153847 - Cblc protein_coding processed_transcript MGP_LPJ_T0081843.1 MGP_LPJ_G0031699.1 mouse_genomes_project 7 18152487 18158896 - Cblc protein_coding retained_intron MGP_LPJ_T0082900.1 MGP_LPJ_G0031962.1 mouse_genomes_project 7 30467058 30475597 - MGP_LPJ_P0082900 Fxyd3 protein_coding protein_coding MGP_LPJ_T0082901.1 MGP_LPJ_G0031962.1 mouse_genomes_project 7 30469434 30471179 - Fxyd3 protein_coding retained_intron MGP_LPJ_T0082902.1 MGP_LPJ_G0031962.1 mouse_genomes_project 7 30469436 30475548 - Fxyd3 protein_coding retained_intron MGP_LPJ_T0082903.1 MGP_LPJ_G0031962.1 mouse_genomes_project 7 30469436 30469938 - Fxyd3 protein_coding retained_intron MGP_LPJ_T0082904.1 MGP_LPJ_G0031962.1 mouse_genomes_project 7 30469436 30470352 - Fxyd3 protein_coding retained_intron MGP_LPJ_T0082905.1 MGP_LPJ_G0031962.1 mouse_genomes_project 7 30469437 30475562 - MGP_LPJ_P0082905 Fxyd3 protein_coding protein_coding MGP_LPJ_T0082906.1 MGP_LPJ_G0031962.1 mouse_genomes_project 7 30469438 30470941 - Fxyd3 protein_coding retained_intron MGP_LPJ_T0082907.1 MGP_LPJ_G0031962.1 mouse_genomes_project 7 30469783 30473851 - MGP_LPJ_P0082907 Fxyd3 protein_coding protein_coding MGP_LPJ_T0082908.1 MGP_LPJ_G0031962.1 mouse_genomes_project 7 30470429 30475547 - Fxyd3 protein_coding retained_intron MGP_LPJ_T0082909.1 MGP_LPJ_G0031962.1 mouse_genomes_project 7 30470905 30475538 - Fxyd3 protein_coding retained_intron MGP_LPJ_T0082910.1 MGP_LPJ_G0031962.1 mouse_genomes_project 7 30471908 30475556 - Fxyd3 protein_coding retained_intron MGP_LPJ_T0011716.1 MGP_LPJ_G0009834.1 mouse_genomes_project 7 150093991 150094186 + Gm27389 misc_RNA misc_RNA MGP_LPJ_T0081608.1 MGP_LPJ_G0031625.1 mouse_genomes_project 7 14950788 14954953 + MGP_LPJ_P0081608 Pnmal2 protein_coding protein_coding MGP_LPJ_T0085807.1 MGP_LPJ_G0032805.1 mouse_genomes_project 7 121250576 121312322 + MGP_LPJ_P0085807 protein_coding protein_coding MGP_LPJ_T0085808.1 MGP_LPJ_G0032805.1 mouse_genomes_project 7 121250890 121313648 + MGP_LPJ_P0085808 protein_coding protein_coding MGP_LPJ_T0085020.1 MGP_LPJ_G0032484.1 mouse_genomes_project 7 104951673 105094690 + MGP_LPJ_P0085020 Fam168a protein_coding protein_coding MGP_LPJ_T0085021.1 MGP_LPJ_G0032484.1 mouse_genomes_project 7 104951724 105095005 + MGP_LPJ_P0085021 Fam168a protein_coding protein_coding MGP_LPJ_T0081645.1 MGP_LPJ_G0031644.1 mouse_genomes_project 7 16720556 16728461 - MGP_LPJ_P0081645 protein_coding protein_coding MGP_LPJ_T0080953.1 MGP_LPJ_G0031422.1 mouse_genomes_project 7 234750 276911 + MGP_LPJ_P0080953 Cacng7 protein_coding protein_coding MGP_LPJ_T0080954.1 MGP_LPJ_G0031422.1 mouse_genomes_project 7 239994 275589 + Cacng7 protein_coding retained_intron MGP_LPJ_T0081303.1 MGP_LPJ_G0031514.1 mouse_genomes_project 7 3708014 3711567 - MGP_LPJ_P0081303 Olfr1348 protein_coding protein_coding MGP_LPJ_T0015859.1 MGP_LPJ_G0013950.1 mouse_genomes_project 7 130742058 130744178 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010930.1 MGP_LPJ_G0009048.1 mouse_genomes_project 7 103669144 103669239 + Mir326 miRNA miRNA MGP_LPJ_T0084647.1 MGP_LPJ_G0032389.1 mouse_genomes_project 7 90161505 90162513 - MGP_LPJ_P0084647 Olfr294 protein_coding protein_coding MGP_LPJ_T0010925.1 MGP_LPJ_G0009043.1 mouse_genomes_project 7 83120814 83120910 + Gm24541 miRNA miRNA MGP_LPJ_T0083003.1 MGP_LPJ_G0031981.1 mouse_genomes_project 7 34594462 34730505 + MGP_LPJ_P0083003 Pepd protein_coding protein_coding MGP_LPJ_T0083004.1 MGP_LPJ_G0031981.1 mouse_genomes_project 7 34628364 34705703 + MGP_LPJ_P0083004 Pepd protein_coding nonsense_mediated_decay MGP_LPJ_T0083005.1 MGP_LPJ_G0031981.1 mouse_genomes_project 7 34653226 34726531 + Pepd protein_coding retained_intron MGP_LPJ_T0083006.1 MGP_LPJ_G0031981.1 mouse_genomes_project 7 34653453 34664784 + Pepd protein_coding retained_intron MGP_LPJ_T0083007.1 MGP_LPJ_G0031981.1 mouse_genomes_project 7 34726278 34730504 + Pepd protein_coding retained_intron MGP_LPJ_T0083008.1 MGP_LPJ_G0031981.1 mouse_genomes_project 7 34728986 34730331 + Pepd protein_coding retained_intron MGP_LPJ_T0082550.1 MGP_LPJ_G0031887.1 mouse_genomes_project 7 28928759 28988253 - MGP_LPJ_P0082550 protein_coding protein_coding MGP_LPJ_T0008917.1 MGP_LPJ_G0007199.1 mouse_genomes_project 7 74034747 74074466 + Gm29295 lincRNA lincRNA MGP_LPJ_T0081554.1 MGP_LPJ_G0031615.1 mouse_genomes_project 7 14705369 14709977 + MGP_LPJ_P0081554 Ceacam9 protein_coding protein_coding MGP_LPJ_T0081555.1 MGP_LPJ_G0031615.1 mouse_genomes_project 7 14705398 14709060 + MGP_LPJ_P0081555 Ceacam9 protein_coding protein_coding MGP_LPJ_T0082156.1 MGP_LPJ_G0031788.1 mouse_genomes_project 7 25081158 25083208 + MGP_LPJ_P0082156 Vmn1r184 protein_coding protein_coding MGP_LPJ_T0085937.1 MGP_LPJ_G0032833.1 mouse_genomes_project 7 125098666 125104384 - MGP_LPJ_P0085937 Thumpd1 protein_coding protein_coding MGP_LPJ_T0082219.1 MGP_LPJ_G0031807.1 mouse_genomes_project 7 26197588 26223491 + MGP_LPJ_P0082219 Coq8b protein_coding protein_coding MGP_LPJ_T0082220.1 MGP_LPJ_G0031807.1 mouse_genomes_project 7 26197778 26223485 + MGP_LPJ_P0082220 Coq8b protein_coding protein_coding MGP_LPJ_T0082221.1 MGP_LPJ_G0031807.1 mouse_genomes_project 7 26197932 26223486 + MGP_LPJ_P0082221 Coq8b protein_coding nonsense_mediated_decay MGP_LPJ_T0082222.1 MGP_LPJ_G0031807.1 mouse_genomes_project 7 26204614 26208384 + Coq8b protein_coding processed_transcript MGP_LPJ_T0082223.1 MGP_LPJ_G0031807.1 mouse_genomes_project 7 26204875 26207679 + Coq8b protein_coding retained_intron MGP_LPJ_T0082224.1 MGP_LPJ_G0031807.1 mouse_genomes_project 7 26215723 26223484 + Coq8b protein_coding retained_intron MGP_LPJ_T0082225.1 MGP_LPJ_G0031807.1 mouse_genomes_project 7 26215925 26222954 + Coq8b protein_coding processed_transcript MGP_LPJ_T0008866.1 MGP_LPJ_G0007164.1 mouse_genomes_project 7 39803130 39803675 - lincRNA lincRNA MGP_LPJ_T0085423.1 MGP_LPJ_G0032669.1 mouse_genomes_project 7 110251288 110261415 - MGP_LPJ_P0085423 Hpx protein_coding protein_coding MGP_LPJ_T0085863.1 MGP_LPJ_G0032813.1 mouse_genomes_project 7 123425450 123547170 - MGP_LPJ_P0085863 Smg1 protein_coding protein_coding MGP_LPJ_T0085864.1 MGP_LPJ_G0032813.1 mouse_genomes_project 7 123428013 123519558 - MGP_LPJ_P0085864 Smg1 protein_coding protein_coding MGP_LPJ_T0085865.1 MGP_LPJ_G0032813.1 mouse_genomes_project 7 123437508 123438526 - MGP_LPJ_P0085865 Smg1 protein_coding protein_coding MGP_LPJ_T0085866.1 MGP_LPJ_G0032813.1 mouse_genomes_project 7 123495627 123547170 - Smg1 protein_coding retained_intron MGP_LPJ_T0085867.1 MGP_LPJ_G0032813.1 mouse_genomes_project 7 123501779 123547160 - MGP_LPJ_P0085867 Smg1 protein_coding protein_coding MGP_LPJ_T0085868.1 MGP_LPJ_G0032813.1 mouse_genomes_project 7 123504295 123546882 - Smg1 protein_coding retained_intron MGP_LPJ_T0002300.1 MGP_LPJ_G0002208.1 mouse_genomes_project 7 82647295 82648334 + TEC TEC MGP_LPJ_T0085360.1 MGP_LPJ_G0032632.1 mouse_genomes_project 7 109044088 109045114 + MGP_LPJ_P0085360 Olfr654 protein_coding protein_coding MGP_LPJ_T0008950.1 MGP_LPJ_G0007227.1 mouse_genomes_project 7 82637000 82669243 + Mir9-3hg lincRNA lincRNA MGP_LPJ_T0008951.1 MGP_LPJ_G0007227.1 mouse_genomes_project 7 82637012 82669448 + Mir9-3hg lincRNA lincRNA MGP_LPJ_T0008952.1 MGP_LPJ_G0007227.1 mouse_genomes_project 7 82637091 82672348 + Mir9-3hg lincRNA lincRNA MGP_LPJ_T0008953.1 MGP_LPJ_G0007227.1 mouse_genomes_project 7 82637095 82669333 + Mir9-3hg lincRNA lincRNA MGP_LPJ_T0008954.1 MGP_LPJ_G0007227.1 mouse_genomes_project 7 82653326 82670531 + Mir9-3hg lincRNA lincRNA MGP_LPJ_T0008955.1 MGP_LPJ_G0007227.1 mouse_genomes_project 7 82653529 82669199 + Mir9-3hg lincRNA lincRNA MGP_LPJ_T0008956.1 MGP_LPJ_G0007227.1 mouse_genomes_project 7 82665940 82669984 + Mir9-3hg lincRNA lincRNA MGP_LPJ_T0002286.1 MGP_LPJ_G0002194.1 mouse_genomes_project 7 78397312 78398939 + TEC TEC MGP_LPJ_T0102373.1 MGP_LPJ_G0040409.1 mouse_genomes_project 7 44780702 44797875 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0102422.1 MGP_LPJ_G0040458.1 mouse_genomes_project 7 89175992 89178223 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0098308.1 MGP_LPJ_G0036589.1 mouse_genomes_project 7 118237743 118237854 + Gm23662 rRNA rRNA MGP_LPJ_T0084141.1 MGP_LPJ_G0032267.1 mouse_genomes_project 7 70226918 70258393 - MGP_LPJ_P0084141 Synm protein_coding protein_coding MGP_LPJ_T0084142.1 MGP_LPJ_G0032267.1 mouse_genomes_project 7 70226918 70258393 - MGP_LPJ_P0084142 Synm protein_coding protein_coding MGP_LPJ_T0098050.1 MGP_LPJ_G0036331.1 mouse_genomes_project 7 64392178 64396585 - pseudogene pseudogene MGP_LPJ_T0099737.1 MGP_LPJ_G0038000.1 mouse_genomes_project 7 127788199 127788306 + Gm23614 snRNA snRNA MGP_LPJ_T0087340.1 MGP_LPJ_G0033143.1 mouse_genomes_project 7 148092335 148098291 - Pddc1 protein_coding retained_intron MGP_LPJ_T0087341.1 MGP_LPJ_G0033143.1 mouse_genomes_project 7 148092384 148093532 - Pddc1 protein_coding retained_intron MGP_LPJ_T0087342.1 MGP_LPJ_G0033143.1 mouse_genomes_project 7 148092384 148098337 - MGP_LPJ_P0087342 Pddc1 protein_coding protein_coding MGP_LPJ_T0087343.1 MGP_LPJ_G0033143.1 mouse_genomes_project 7 148092386 148098279 - Pddc1 protein_coding retained_intron MGP_LPJ_T0087344.1 MGP_LPJ_G0033143.1 mouse_genomes_project 7 148095044 148098266 - Pddc1 protein_coding retained_intron MGP_LPJ_T0087345.1 MGP_LPJ_G0033143.1 mouse_genomes_project 7 148095751 148098277 - Pddc1 protein_coding retained_intron MGP_LPJ_T0002274.1 MGP_LPJ_G0002183.1 mouse_genomes_project 7 75360306 75360806 + TEC TEC MGP_LPJ_T0085243.1 MGP_LPJ_G0032549.1 mouse_genomes_project 7 107453612 107454572 + MGP_LPJ_P0085243 Olfr582 protein_coding protein_coding MGP_LPJ_T0081469.1 MGP_LPJ_G0031588.1 mouse_genomes_project 7 12210065 12211878 - MGP_LPJ_P0081469 protein_coding protein_coding MGP_LPJ_T0015694.1 MGP_LPJ_G0013785.1 mouse_genomes_project 7 24382895 24383472 + processed_pseudogene processed_pseudogene MGP_LPJ_T0087543.1 MGP_LPJ_G0033178.1 mouse_genomes_project 7 149426486 149433193 - MGP_LPJ_P0087543 Igf2 protein_coding protein_coding MGP_LPJ_T0087544.1 MGP_LPJ_G0033178.1 mouse_genomes_project 7 149426489 149435144 - MGP_LPJ_P0087544 Igf2 protein_coding protein_coding MGP_LPJ_T0087545.1 MGP_LPJ_G0033178.1 mouse_genomes_project 7 149426489 149433163 - MGP_LPJ_P0087545 Igf2 protein_coding protein_coding MGP_LPJ_T0087546.1 MGP_LPJ_G0033178.1 mouse_genomes_project 7 149426489 149436967 - MGP_LPJ_P0087546 Igf2 protein_coding protein_coding MGP_LPJ_T0087547.1 MGP_LPJ_G0033178.1 mouse_genomes_project 7 149426563 149428730 - Igf2 protein_coding processed_transcript MGP_LPJ_T0087548.1 MGP_LPJ_G0033178.1 mouse_genomes_project 7 149429455 149442449 - MGP_LPJ_P0087548 Igf2 protein_coding protein_coding MGP_LPJ_T0087549.1 MGP_LPJ_G0033178.1 mouse_genomes_project 7 149429748 149437532 - MGP_LPJ_P0087549 Igf2 protein_coding protein_coding MGP_LPJ_T0087550.1 MGP_LPJ_G0033178.1 mouse_genomes_project 7 149430051 149431715 - MGP_LPJ_P0087550 Igf2 protein_coding protein_coding MGP_LPJ_T0087551.1 MGP_LPJ_G0033178.1 mouse_genomes_project 7 149431141 149436867 - Igf2 protein_coding retained_intron MGP_LPJ_T0085315.1 MGP_LPJ_G0032616.1 mouse_genomes_project 7 108704872 108713524 - MGP_LPJ_P0085315 Olfm5 protein_coding protein_coding MGP_LPJ_T0085316.1 MGP_LPJ_G0032616.1 mouse_genomes_project 7 108705976 108713505 - MGP_LPJ_P0085316 Olfm5 protein_coding protein_coding MGP_LPJ_T0085369.1 MGP_LPJ_G0032641.1 mouse_genomes_project 7 109442704 109443685 - MGP_LPJ_P0085369 Olfr667 protein_coding protein_coding MGP_LPJ_T0082374.1 MGP_LPJ_G0031848.1 mouse_genomes_project 7 27500335 27508561 + MGP_LPJ_P0082374 Paf1 protein_coding protein_coding MGP_LPJ_T0082375.1 MGP_LPJ_G0031848.1 mouse_genomes_project 7 27500346 27501432 + Paf1 protein_coding retained_intron MGP_LPJ_T0082376.1 MGP_LPJ_G0031848.1 mouse_genomes_project 7 27500425 27508556 + Paf1 protein_coding retained_intron MGP_LPJ_T0082377.1 MGP_LPJ_G0031848.1 mouse_genomes_project 7 27500545 27503162 + Paf1 protein_coding retained_intron MGP_LPJ_T0082378.1 MGP_LPJ_G0031848.1 mouse_genomes_project 7 27500842 27503080 + Paf1 protein_coding retained_intron MGP_LPJ_T0082379.1 MGP_LPJ_G0031848.1 mouse_genomes_project 7 27502147 27503184 + Paf1 protein_coding retained_intron MGP_LPJ_T0082380.1 MGP_LPJ_G0031848.1 mouse_genomes_project 7 27502809 27503464 + Paf1 protein_coding retained_intron MGP_LPJ_T0082381.1 MGP_LPJ_G0031848.1 mouse_genomes_project 7 27503209 27507916 + Paf1 protein_coding retained_intron MGP_LPJ_T0082382.1 MGP_LPJ_G0031848.1 mouse_genomes_project 7 27507606 27508233 + Paf1 protein_coding processed_transcript MGP_LPJ_T0081410.1 MGP_LPJ_G0031565.1 mouse_genomes_project 7 10525177 10527960 - MGP_LPJ_P0081410 Chmp2a protein_coding protein_coding MGP_LPJ_T0086925.1 MGP_LPJ_G0033026.1 mouse_genomes_project 7 138204522 138327792 - MGP_LPJ_P0086925 Cpxm2 protein_coding protein_coding MGP_LPJ_T0086926.1 MGP_LPJ_G0033026.1 mouse_genomes_project 7 138216426 138221668 - Cpxm2 protein_coding retained_intron MGP_LPJ_T0086927.1 MGP_LPJ_G0033026.1 mouse_genomes_project 7 138218859 138327675 - Cpxm2 protein_coding retained_intron MGP_LPJ_T0086928.1 MGP_LPJ_G0033026.1 mouse_genomes_project 7 138270588 138318682 - Cpxm2 protein_coding processed_transcript MGP_LPJ_T0083115.1 MGP_LPJ_G0032001.1 mouse_genomes_project 7 37992918 38002485 - MGP_LPJ_P0083115 Ccne1 protein_coding protein_coding MGP_LPJ_T0083116.1 MGP_LPJ_G0032001.1 mouse_genomes_project 7 37993602 37994438 - Ccne1 protein_coding retained_intron MGP_LPJ_T0083117.1 MGP_LPJ_G0032001.1 mouse_genomes_project 7 37993748 37994306 - Ccne1 protein_coding processed_transcript MGP_LPJ_T0083118.1 MGP_LPJ_G0032001.1 mouse_genomes_project 7 37995587 38001850 - MGP_LPJ_P0083118 Ccne1 protein_coding protein_coding MGP_LPJ_T0083119.1 MGP_LPJ_G0032001.1 mouse_genomes_project 7 37998100 38002453 - MGP_LPJ_P0083119 Ccne1 protein_coding nonsense_mediated_decay MGP_LPJ_T0083559.1 MGP_LPJ_G0032129.1 mouse_genomes_project 7 46392098 46417812 + MGP_LPJ_P0083559 Gys1 protein_coding protein_coding MGP_LPJ_T0083560.1 MGP_LPJ_G0032129.1 mouse_genomes_project 7 46392131 46417023 + MGP_LPJ_P0083560 Gys1 protein_coding protein_coding MGP_LPJ_T0083561.1 MGP_LPJ_G0032129.1 mouse_genomes_project 7 46407398 46412994 + Gys1 protein_coding processed_transcript MGP_LPJ_T0083562.1 MGP_LPJ_G0032129.1 mouse_genomes_project 7 46407524 46413018 + Gys1 protein_coding processed_transcript MGP_LPJ_T0083563.1 MGP_LPJ_G0032129.1 mouse_genomes_project 7 46408047 46416515 + Gys1 protein_coding retained_intron MGP_LPJ_T0083564.1 MGP_LPJ_G0032129.1 mouse_genomes_project 7 46412191 46413283 + Gys1 protein_coding retained_intron MGP_LPJ_T0083197.1 MGP_LPJ_G0032029.1 mouse_genomes_project 7 44196762 44215917 + MGP_LPJ_P0083197 Gm45233 protein_coding nonsense_mediated_decay MGP_LPJ_T0083199.1 MGP_LPJ_G0032029.1 mouse_genomes_project 7 44196765 44216000 + MGP_LPJ_P0083199 Gm45233 protein_coding nonsense_mediated_decay MGP_LPJ_T0084635.1 MGP_LPJ_G0032379.1 mouse_genomes_project 7 89824309 89831335 - MGP_LPJ_P0084635 Olfr309 protein_coding protein_coding MGP_LPJ_T0084636.1 MGP_LPJ_G0032379.1 mouse_genomes_project 7 89824309 89825236 - MGP_LPJ_P0084636 Olfr309 protein_coding protein_coding MGP_LPJ_T0010928.1 MGP_LPJ_G0009046.1 mouse_genomes_project 7 100229143 100229252 + Mir708 miRNA miRNA MGP_LPJ_T0015799.1 MGP_LPJ_G0013890.1 mouse_genomes_project 7 84498327 84498840 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098055.1 MGP_LPJ_G0036336.1 mouse_genomes_project 7 109183699 109184658 + pseudogene pseudogene MGP_LPJ_T0102442.1 MGP_LPJ_G0040478.1 mouse_genomes_project 7 107564037 107564979 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0009070.1 MGP_LPJ_G0007298.1 mouse_genomes_project 7 142035336 142051505 - 5830432E09Rik lincRNA lincRNA MGP_LPJ_T0009071.1 MGP_LPJ_G0007298.1 mouse_genomes_project 7 142047678 142051536 - 5830432E09Rik lincRNA lincRNA MGP_LPJ_T0081423.1 MGP_LPJ_G0031569.1 mouse_genomes_project 7 10650000 10650888 - MGP_LPJ_P0081423 Vmn1r87 protein_coding protein_coding MGP_LPJ_T0081789.1 MGP_LPJ_G0031687.1 mouse_genomes_project 7 17907636 17917751 - MGP_LPJ_P0081789 Gemin7 protein_coding protein_coding MGP_LPJ_T0081790.1 MGP_LPJ_G0031687.1 mouse_genomes_project 7 17907639 17917256 - MGP_LPJ_P0081790 Gemin7 protein_coding protein_coding MGP_LPJ_T0081791.1 MGP_LPJ_G0031687.1 mouse_genomes_project 7 17907777 17916881 - MGP_LPJ_P0081791 Gemin7 protein_coding protein_coding MGP_LPJ_T0081792.1 MGP_LPJ_G0031687.1 mouse_genomes_project 7 17907809 17917002 - MGP_LPJ_P0081792 Gemin7 protein_coding protein_coding MGP_LPJ_T0081793.1 MGP_LPJ_G0031687.1 mouse_genomes_project 7 17907936 17917298 - MGP_LPJ_P0081793 Gemin7 protein_coding protein_coding MGP_LPJ_T0081794.1 MGP_LPJ_G0031687.1 mouse_genomes_project 7 17908114 17917087 - MGP_LPJ_P0081794 Gemin7 protein_coding protein_coding MGP_LPJ_T0082392.1 MGP_LPJ_G0031853.1 mouse_genomes_project 7 27666225 27667551 + MGP_LPJ_P0082392 Sycn protein_coding protein_coding MGP_LPJ_T0085378.1 MGP_LPJ_G0032650.1 mouse_genomes_project 7 109652356 109653298 + MGP_LPJ_P0085378 Olfr678 protein_coding protein_coding MGP_LPJ_T0083477.1 MGP_LPJ_G0032108.1 mouse_genomes_project 7 46042096 46045277 - MGP_LPJ_P0083477 Rpl13a protein_coding protein_coding MGP_LPJ_T0084196.1 MGP_LPJ_G0032280.1 mouse_genomes_project 7 78368031 78670929 + MGP_LPJ_P0084196 Akap13 protein_coding protein_coding MGP_LPJ_T0084197.1 MGP_LPJ_G0032280.1 mouse_genomes_project 7 78448706 78670934 + MGP_LPJ_P0084197 Akap13 protein_coding unknown_likely_coding MGP_LPJ_T0081014.1 MGP_LPJ_G0031434.1 mouse_genomes_project 7 636953 645019 + protein_coding retained_intron MGP_LPJ_T0085147.1 MGP_LPJ_G0032504.1 mouse_genomes_project 7 106356269 106359346 - MGP_LPJ_P0085147 Il18bp protein_coding protein_coding MGP_LPJ_T0085540.1 MGP_LPJ_G0032717.1 mouse_genomes_project 7 112841368 112842451 + MGP_LPJ_P0085540 Olfr472 protein_coding protein_coding MGP_LPJ_T0082794.1 MGP_LPJ_G0031946.1 mouse_genomes_project 7 30094781 30114073 + MGP_LPJ_P0082794 Dmkn protein_coding protein_coding MGP_LPJ_T0082795.1 MGP_LPJ_G0031946.1 mouse_genomes_project 7 30094788 30114072 + MGP_LPJ_P0082795 Dmkn protein_coding protein_coding MGP_LPJ_T0082796.1 MGP_LPJ_G0031946.1 mouse_genomes_project 7 30094788 30114072 + MGP_LPJ_P0082796 Dmkn protein_coding protein_coding MGP_LPJ_T0082797.1 MGP_LPJ_G0031946.1 mouse_genomes_project 7 30094824 30114072 + MGP_LPJ_P0082797 Dmkn protein_coding protein_coding MGP_LPJ_T0082798.1 MGP_LPJ_G0031946.1 mouse_genomes_project 7 30096082 30113818 + MGP_LPJ_P0082798 Dmkn protein_coding protein_coding MGP_LPJ_T0082799.1 MGP_LPJ_G0031946.1 mouse_genomes_project 7 30107190 30114077 + MGP_LPJ_P0082799 Dmkn protein_coding protein_coding MGP_LPJ_T0084651.1 MGP_LPJ_G0032393.1 mouse_genomes_project 7 90268894 90338061 - MGP_LPJ_P0084651 Folh1 protein_coding protein_coding MGP_LPJ_T0084652.1 MGP_LPJ_G0032393.1 mouse_genomes_project 7 90268894 90338005 - MGP_LPJ_P0084652 Folh1 protein_coding protein_coding MGP_LPJ_T0084653.1 MGP_LPJ_G0032393.1 mouse_genomes_project 7 90269194 90337956 - MGP_LPJ_P0084653 Folh1 protein_coding unknown_likely_coding MGP_LPJ_T0085362.1 MGP_LPJ_G0032634.1 mouse_genomes_project 7 109075253 109076244 + MGP_LPJ_P0085362 Olfr656 protein_coding protein_coding MGP_LPJ_T0099742.1 MGP_LPJ_G0038005.1 mouse_genomes_project 7 132689252 132689359 - Gm23445 snRNA snRNA MGP_LPJ_T0085263.1 MGP_LPJ_G0032567.1 mouse_genomes_project 7 107915842 107916757 - MGP_LPJ_P0085263 protein_coding protein_coding MGP_LPJ_T0015870.1 MGP_LPJ_G0013961.1 mouse_genomes_project 7 133087841 133088183 - processed_pseudogene processed_pseudogene MGP_LPJ_T0082477.1 MGP_LPJ_G0031873.1 mouse_genomes_project 7 28332160 28351195 + MGP_LPJ_P0082477 Rasgrp4 protein_coding protein_coding MGP_LPJ_T0082478.1 MGP_LPJ_G0031873.1 mouse_genomes_project 7 28332160 28351195 + MGP_LPJ_P0082478 Rasgrp4 protein_coding protein_coding MGP_LPJ_T0082479.1 MGP_LPJ_G0031873.1 mouse_genomes_project 7 28332160 28351195 + MGP_LPJ_P0082479 Rasgrp4 protein_coding protein_coding MGP_LPJ_T0082480.1 MGP_LPJ_G0031873.1 mouse_genomes_project 7 28332160 28351195 + MGP_LPJ_P0082480 Rasgrp4 protein_coding protein_coding MGP_LPJ_T0082481.1 MGP_LPJ_G0031873.1 mouse_genomes_project 7 28332160 28351195 + MGP_LPJ_P0082481 Rasgrp4 protein_coding protein_coding MGP_LPJ_T0082482.1 MGP_LPJ_G0031873.1 mouse_genomes_project 7 28332160 28351195 + MGP_LPJ_P0082482 Rasgrp4 protein_coding protein_coding MGP_LPJ_T0082483.1 MGP_LPJ_G0031873.1 mouse_genomes_project 7 28332242 28347969 + Rasgrp4 protein_coding retained_intron MGP_LPJ_T0082484.1 MGP_LPJ_G0031873.1 mouse_genomes_project 7 28332242 28350274 + MGP_LPJ_P0082484 Rasgrp4 protein_coding protein_coding MGP_LPJ_T0082485.1 MGP_LPJ_G0031873.1 mouse_genomes_project 7 28332242 28352614 + MGP_LPJ_P0082485 Rasgrp4 protein_coding protein_coding MGP_LPJ_T0082486.1 MGP_LPJ_G0031873.1 mouse_genomes_project 7 28332242 28352592 + MGP_LPJ_P0082486 Rasgrp4 protein_coding protein_coding MGP_LPJ_T0082487.1 MGP_LPJ_G0031873.1 mouse_genomes_project 7 28332291 28349631 + Rasgrp4 protein_coding retained_intron MGP_LPJ_T0082488.1 MGP_LPJ_G0031873.1 mouse_genomes_project 7 28332315 28347204 + MGP_LPJ_P0082488 Rasgrp4 protein_coding protein_coding MGP_LPJ_T0082489.1 MGP_LPJ_G0031873.1 mouse_genomes_project 7 28332382 28350152 + MGP_LPJ_P0082489 Rasgrp4 protein_coding nonsense_mediated_decay MGP_LPJ_T0082490.1 MGP_LPJ_G0031873.1 mouse_genomes_project 7 28348848 28350272 + MGP_LPJ_P0082490 Rasgrp4 protein_coding protein_coding MGP_LPJ_T0102308.1 MGP_LPJ_G0040345.1 mouse_genomes_project 7 9546955 9547944 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0083024.1 MGP_LPJ_G0031986.1 mouse_genomes_project 7 34978589 35027582 - MGP_LPJ_P0083024 Gpatch1 protein_coding protein_coding MGP_LPJ_T0083025.1 MGP_LPJ_G0031986.1 mouse_genomes_project 7 34978597 35027563 - MGP_LPJ_P0083025 Gpatch1 protein_coding nonsense_mediated_decay MGP_LPJ_T0083026.1 MGP_LPJ_G0031986.1 mouse_genomes_project 7 34988069 35027582 - MGP_LPJ_P0083026 Gpatch1 protein_coding nonsense_mediated_decay MGP_LPJ_T0083027.1 MGP_LPJ_G0031986.1 mouse_genomes_project 7 34988102 34989770 - Gpatch1 protein_coding retained_intron MGP_LPJ_T0083028.1 MGP_LPJ_G0031986.1 mouse_genomes_project 7 35014732 35027537 - Gpatch1 protein_coding retained_intron MGP_LPJ_T0102397.1 MGP_LPJ_G0040433.1 mouse_genomes_project 7 49457622 49458442 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0087135.1 MGP_LPJ_G0033079.1 mouse_genomes_project 7 146716496 146722128 - MGP_LPJ_P0087135 Fuom protein_coding protein_coding MGP_LPJ_T0087136.1 MGP_LPJ_G0033079.1 mouse_genomes_project 7 146718237 146722131 - MGP_LPJ_P0087136 Fuom protein_coding nonsense_mediated_decay MGP_LPJ_T0087137.1 MGP_LPJ_G0033079.1 mouse_genomes_project 7 146719196 146722166 - MGP_LPJ_P0087137 Fuom protein_coding protein_coding MGP_LPJ_T0087138.1 MGP_LPJ_G0033079.1 mouse_genomes_project 7 146719196 146722101 - MGP_LPJ_P0087138 Fuom protein_coding protein_coding MGP_LPJ_T0087139.1 MGP_LPJ_G0033079.1 mouse_genomes_project 7 146719198 146719695 - Fuom protein_coding retained_intron MGP_LPJ_T0087140.1 MGP_LPJ_G0033079.1 mouse_genomes_project 7 146719200 146722045 - Fuom protein_coding processed_transcript MGP_LPJ_T0087141.1 MGP_LPJ_G0033079.1 mouse_genomes_project 7 146719220 146720971 - Fuom protein_coding retained_intron MGP_LPJ_T0087142.1 MGP_LPJ_G0033079.1 mouse_genomes_project 7 146719615 146722069 - MGP_LPJ_P0087142 Fuom protein_coding protein_coding MGP_LPJ_T0087143.1 MGP_LPJ_G0033079.1 mouse_genomes_project 7 146720283 146722131 - MGP_LPJ_P0087143 Fuom protein_coding protein_coding MGP_LPJ_T0087144.1 MGP_LPJ_G0033079.1 mouse_genomes_project 7 146720829 146722031 - Fuom protein_coding processed_transcript MGP_LPJ_T0087145.1 MGP_LPJ_G0033079.1 mouse_genomes_project 7 146720881 146721691 - Fuom protein_coding processed_transcript MGP_LPJ_T0087146.1 MGP_LPJ_G0033079.1 mouse_genomes_project 7 146720890 146722131 - Fuom protein_coding retained_intron MGP_LPJ_T0087147.1 MGP_LPJ_G0033079.1 mouse_genomes_project 7 146721005 146722055 - Fuom protein_coding retained_intron MGP_LPJ_T0085309.1 MGP_LPJ_G0032610.1 mouse_genomes_project 7 108623256 108624201 - MGP_LPJ_P0085309 protein_coding protein_coding MGP_LPJ_T0008810.1 MGP_LPJ_G0007116.1 mouse_genomes_project 7 378801 403556 + Gm44160 lincRNA lincRNA MGP_LPJ_T0015637.1 MGP_LPJ_G0013728.1 mouse_genomes_project 7 493387 493688 - processed_pseudogene processed_pseudogene MGP_LPJ_T0083073.1 MGP_LPJ_G0031995.1 mouse_genomes_project 7 35383016 35390656 - MGP_LPJ_P0083073 Pdcd5 protein_coding protein_coding MGP_LPJ_T0083074.1 MGP_LPJ_G0031995.1 mouse_genomes_project 7 35383046 35390344 - MGP_LPJ_P0083074 Pdcd5 protein_coding protein_coding MGP_LPJ_T0083075.1 MGP_LPJ_G0031995.1 mouse_genomes_project 7 35383048 35386188 - Pdcd5 protein_coding retained_intron MGP_LPJ_T0083076.1 MGP_LPJ_G0031995.1 mouse_genomes_project 7 35383050 35386999 - Pdcd5 protein_coding retained_intron MGP_LPJ_T0083077.1 MGP_LPJ_G0031995.1 mouse_genomes_project 7 35386965 35390639 - Pdcd5 protein_coding retained_intron MGP_LPJ_T0083078.1 MGP_LPJ_G0031995.1 mouse_genomes_project 7 35387330 35390615 - Pdcd5 protein_coding retained_intron MGP_LPJ_T0083079.1 MGP_LPJ_G0031995.1 mouse_genomes_project 7 35388810 35390601 - Pdcd5 protein_coding retained_intron MGP_LPJ_T0015793.1 MGP_LPJ_G0013884.1 mouse_genomes_project 7 80313092 80313595 - processed_pseudogene processed_pseudogene MGP_LPJ_T0081546.1 MGP_LPJ_G0031609.1 mouse_genomes_project 7 14281937 14341805 - MGP_LPJ_P0081546 Sae1 protein_coding protein_coding MGP_LPJ_T0002294.1 MGP_LPJ_G0002202.1 mouse_genomes_project 7 81268270 81269534 - TEC TEC MGP_LPJ_T0010876.1 MGP_LPJ_G0008994.1 mouse_genomes_project 7 29182693 29182753 + Mir7668 miRNA miRNA MGP_LPJ_T0081754.1 MGP_LPJ_G0031676.1 mouse_genomes_project 7 17681309 17682877 + Ppp1r13l protein_coding processed_transcript MGP_LPJ_T0081755.1 MGP_LPJ_G0031676.1 mouse_genomes_project 7 17681330 17691540 + MGP_LPJ_P0081755 Ppp1r13l protein_coding protein_coding MGP_LPJ_T0081756.1 MGP_LPJ_G0031676.1 mouse_genomes_project 7 17682206 17691536 + MGP_LPJ_P0081756 Ppp1r13l protein_coding protein_coding MGP_LPJ_T0081757.1 MGP_LPJ_G0031676.1 mouse_genomes_project 7 17682776 17700146 + MGP_LPJ_P0081757 Ppp1r13l protein_coding protein_coding MGP_LPJ_T0081758.1 MGP_LPJ_G0031676.1 mouse_genomes_project 7 17690117 17691514 + MGP_LPJ_P0081758 Ppp1r13l protein_coding protein_coding MGP_LPJ_T0002229.1 MGP_LPJ_G0002138.1 mouse_genomes_project 7 33885448 33886543 - TEC TEC MGP_LPJ_T0082333.1 MGP_LPJ_G0031834.1 mouse_genomes_project 7 27175684 27178502 - MGP_LPJ_P0082333 protein_coding protein_coding MGP_LPJ_T0083136.1 MGP_LPJ_G0032007.1 mouse_genomes_project 7 39524328 39545705 + MGP_LPJ_P0083136 Zfp619 protein_coding protein_coding MGP_LPJ_T0015867.1 MGP_LPJ_G0013958.1 mouse_genomes_project 7 132574817 132575121 + processed_pseudogene processed_pseudogene MGP_LPJ_T0086202.1 MGP_LPJ_G0032892.1 mouse_genomes_project 7 132091752 132097397 - MGP_LPJ_P0086202 Lat protein_coding protein_coding MGP_LPJ_T0086203.1 MGP_LPJ_G0032892.1 mouse_genomes_project 7 132091755 132097390 - MGP_LPJ_P0086203 Lat protein_coding protein_coding MGP_LPJ_T0086204.1 MGP_LPJ_G0032892.1 mouse_genomes_project 7 132091832 132092816 - Lat protein_coding retained_intron MGP_LPJ_T0086205.1 MGP_LPJ_G0032892.1 mouse_genomes_project 7 132095373 132097426 - Lat protein_coding retained_intron MGP_LPJ_T0086206.1 MGP_LPJ_G0032892.1 mouse_genomes_project 7 132095954 132097350 - MGP_LPJ_P0086206 Lat protein_coding protein_coding MGP_LPJ_T0086207.1 MGP_LPJ_G0032892.1 mouse_genomes_project 7 132096512 132097196 - Lat protein_coding retained_intron MGP_LPJ_T0085094.1 MGP_LPJ_G0032495.1 mouse_genomes_project 7 106146772 106151186 + MGP_LPJ_P0085094 Phox2a protein_coding protein_coding MGP_LPJ_T0082149.1 MGP_LPJ_G0031784.1 mouse_genomes_project 7 24699530 24732989 + MGP_LPJ_P0082149 Cyp2b10 protein_coding protein_coding MGP_LPJ_T0082150.1 MGP_LPJ_G0031784.1 mouse_genomes_project 7 24699586 24732924 + MGP_LPJ_P0082150 Cyp2b10 protein_coding protein_coding MGP_LPJ_T0082151.1 MGP_LPJ_G0031784.1 mouse_genomes_project 7 24722717 24723382 + Cyp2b10 protein_coding retained_intron MGP_LPJ_T0085288.1 MGP_LPJ_G0032591.1 mouse_genomes_project 7 108350147 108351621 - MGP_LPJ_P0085288 protein_coding protein_coding MGP_LPJ_T0084753.1 MGP_LPJ_G0032423.1 mouse_genomes_project 7 96671438 96690335 - MGP_LPJ_P0084753 Ddias protein_coding protein_coding MGP_LPJ_T0102456.1 MGP_LPJ_G0040492.1 mouse_genomes_project 7 109133522 109134476 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0098306.1 MGP_LPJ_G0036587.1 mouse_genomes_project 7 93972878 93972991 + n-R5s155 rRNA rRNA MGP_LPJ_T0081342.1 MGP_LPJ_G0031541.1 mouse_genomes_project 7 9627148 9628075 + MGP_LPJ_P0081342 Vmn1r80 protein_coding protein_coding MGP_LPJ_T0083404.1 MGP_LPJ_G0032085.1 mouse_genomes_project 7 45702979 45706374 - MGP_LPJ_P0083404 Atf5 protein_coding protein_coding MGP_LPJ_T0083405.1 MGP_LPJ_G0032085.1 mouse_genomes_project 7 45702980 45707347 - MGP_LPJ_P0083405 Atf5 protein_coding protein_coding MGP_LPJ_T0102341.1 MGP_LPJ_G0040377.1 mouse_genomes_project 7 30667222 30667609 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0084634.1 MGP_LPJ_G0032378.1 mouse_genomes_project 7 89765639 89766721 - MGP_LPJ_P0084634 Olfr310 protein_coding protein_coding MGP_LPJ_T0087246.1 MGP_LPJ_G0033124.1 mouse_genomes_project 7 147716549 147727278 + MGP_LPJ_P0087246 B4galnt4 protein_coding protein_coding MGP_LPJ_T0100972.1 MGP_LPJ_G0039235.1 mouse_genomes_project 7 71503001 71503138 - Gm23795 snoRNA snoRNA MGP_LPJ_T0085308.1 MGP_LPJ_G0032609.1 mouse_genomes_project 7 108610736 108611681 - MGP_LPJ_P0085308 protein_coding protein_coding MGP_LPJ_T0083686.1 MGP_LPJ_G0032161.1 mouse_genomes_project 7 46930410 46950929 + MGP_LPJ_P0083686 Tmem143 protein_coding protein_coding MGP_LPJ_T0083687.1 MGP_LPJ_G0032161.1 mouse_genomes_project 7 46930550 46950929 + MGP_LPJ_P0083687 Tmem143 protein_coding nonsense_mediated_decay MGP_LPJ_T0083688.1 MGP_LPJ_G0032161.1 mouse_genomes_project 7 46930570 46950925 + MGP_LPJ_P0083688 Tmem143 protein_coding protein_coding MGP_LPJ_T0083689.1 MGP_LPJ_G0032161.1 mouse_genomes_project 7 46930889 46935621 + Tmem143 protein_coding retained_intron MGP_LPJ_T0083690.1 MGP_LPJ_G0032161.1 mouse_genomes_project 7 46930892 46941753 + Tmem143 protein_coding processed_transcript MGP_LPJ_T0083691.1 MGP_LPJ_G0032161.1 mouse_genomes_project 7 46930898 46941000 + Tmem143 protein_coding retained_intron MGP_LPJ_T0083692.1 MGP_LPJ_G0032161.1 mouse_genomes_project 7 46930898 46943060 + MGP_LPJ_P0083692 Tmem143 protein_coding protein_coding MGP_LPJ_T0083693.1 MGP_LPJ_G0032161.1 mouse_genomes_project 7 46942397 46943002 + Tmem143 protein_coding processed_transcript MGP_LPJ_T0083694.1 MGP_LPJ_G0032161.1 mouse_genomes_project 7 46949529 46950491 + Tmem143 protein_coding processed_transcript MGP_LPJ_T0081218.1 MGP_LPJ_G0031474.1 mouse_genomes_project 7 1977408 1980146 + MGP_LPJ_P0081218 Nat14 protein_coding protein_coding MGP_LPJ_T0084891.1 MGP_LPJ_G0032450.1 mouse_genomes_project 7 102779946 102794884 + MGP_LPJ_P0084891 Prkrir protein_coding protein_coding MGP_LPJ_T0084892.1 MGP_LPJ_G0032450.1 mouse_genomes_project 7 102779946 102792189 + MGP_LPJ_P0084892 Prkrir protein_coding nonsense_mediated_decay MGP_LPJ_T0084893.1 MGP_LPJ_G0032450.1 mouse_genomes_project 7 102780171 102791935 + MGP_LPJ_P0084893 Prkrir protein_coding nonsense_mediated_decay MGP_LPJ_T0084894.1 MGP_LPJ_G0032450.1 mouse_genomes_project 7 102786698 102792079 + Prkrir protein_coding processed_transcript MGP_LPJ_T0005284.1 MGP_LPJ_G0004488.1 mouse_genomes_project 7 100817920 100822374 - Gm44633 antisense antisense MGP_LPJ_T0099698.1 MGP_LPJ_G0037961.1 mouse_genomes_project 7 17013136 17013243 - Gm24464 snRNA snRNA MGP_LPJ_T0084277.1 MGP_LPJ_G0032294.1 mouse_genomes_project 7 82525533 82536372 + MGP_LPJ_P0084277 Fanci protein_coding protein_coding MGP_LPJ_T0084278.1 MGP_LPJ_G0032294.1 mouse_genomes_project 7 82525916 82544070 + MGP_LPJ_P0084278 Fanci protein_coding protein_coding MGP_LPJ_T0084279.1 MGP_LPJ_G0032294.1 mouse_genomes_project 7 82525920 82585987 + MGP_LPJ_P0084279 Fanci protein_coding protein_coding MGP_LPJ_T0084280.1 MGP_LPJ_G0032294.1 mouse_genomes_project 7 82525961 82585987 + MGP_LPJ_P0084280 Fanci protein_coding nonsense_mediated_decay MGP_LPJ_T0084281.1 MGP_LPJ_G0032294.1 mouse_genomes_project 7 82533623 82569951 + MGP_LPJ_P0084281 Fanci protein_coding protein_coding MGP_LPJ_T0084282.1 MGP_LPJ_G0032294.1 mouse_genomes_project 7 82547070 82561496 + MGP_LPJ_P0084282 Fanci protein_coding nonsense_mediated_decay MGP_LPJ_T0084283.1 MGP_LPJ_G0032294.1 mouse_genomes_project 7 82576575 82581449 + MGP_LPJ_P0084283 Fanci protein_coding nonsense_mediated_decay MGP_LPJ_T0100987.1 MGP_LPJ_G0039250.1 mouse_genomes_project 7 114480099 114480229 + Gm24888 snoRNA snoRNA MGP_LPJ_T0082241.1 MGP_LPJ_G0031811.1 mouse_genomes_project 7 26312624 26327546 - MGP_LPJ_P0082241 Shkbp1 protein_coding protein_coding MGP_LPJ_T0082242.1 MGP_LPJ_G0031811.1 mouse_genomes_project 7 26312628 26327481 - Shkbp1 protein_coding retained_intron MGP_LPJ_T0082243.1 MGP_LPJ_G0031811.1 mouse_genomes_project 7 26312628 26327270 - Shkbp1 protein_coding retained_intron MGP_LPJ_T0082244.1 MGP_LPJ_G0031811.1 mouse_genomes_project 7 26312629 26316106 - Shkbp1 protein_coding processed_transcript MGP_LPJ_T0082245.1 MGP_LPJ_G0031811.1 mouse_genomes_project 7 26312903 26313413 - Shkbp1 protein_coding retained_intron MGP_LPJ_T0082246.1 MGP_LPJ_G0031811.1 mouse_genomes_project 7 26313647 26318929 - Shkbp1 protein_coding processed_transcript MGP_LPJ_T0082247.1 MGP_LPJ_G0031811.1 mouse_genomes_project 7 26315482 26317956 - Shkbp1 protein_coding retained_intron MGP_LPJ_T0082248.1 MGP_LPJ_G0031811.1 mouse_genomes_project 7 26318601 26320964 - Shkbp1 protein_coding retained_intron MGP_LPJ_T0082249.1 MGP_LPJ_G0031811.1 mouse_genomes_project 7 26323171 26327286 - Shkbp1 protein_coding retained_intron MGP_LPJ_T0082250.1 MGP_LPJ_G0031811.1 mouse_genomes_project 7 26323212 26327449 - Shkbp1 protein_coding processed_transcript MGP_LPJ_T0082252.1 MGP_LPJ_G0031811.1 mouse_genomes_project 7 26325605 26327298 - Shkbp1 protein_coding retained_intron MGP_LPJ_T0085390.1 MGP_LPJ_G0032662.1 mouse_genomes_project 7 110018988 110047810 - MGP_LPJ_P0085390 Fam160a2 protein_coding protein_coding MGP_LPJ_T0085391.1 MGP_LPJ_G0032662.1 mouse_genomes_project 7 110018988 110047832 - MGP_LPJ_P0085391 Fam160a2 protein_coding protein_coding MGP_LPJ_T0085393.1 MGP_LPJ_G0032662.1 mouse_genomes_project 7 110026387 110047832 - MGP_LPJ_P0085393 Fam160a2 protein_coding protein_coding MGP_LPJ_T0085394.1 MGP_LPJ_G0032662.1 mouse_genomes_project 7 110026387 110047763 - MGP_LPJ_P0085394 Fam160a2 protein_coding nonsense_mediated_decay MGP_LPJ_T0085395.1 MGP_LPJ_G0032662.1 mouse_genomes_project 7 110026388 110047789 - MGP_LPJ_P0085395 Fam160a2 protein_coding protein_coding MGP_LPJ_T0085396.1 MGP_LPJ_G0032662.1 mouse_genomes_project 7 110026388 110047786 - MGP_LPJ_P0085396 Fam160a2 protein_coding protein_coding MGP_LPJ_T0085397.1 MGP_LPJ_G0032662.1 mouse_genomes_project 7 110026853 110029759 - Fam160a2 protein_coding retained_intron MGP_LPJ_T0085398.1 MGP_LPJ_G0032662.1 mouse_genomes_project 7 110033165 110036889 - Fam160a2 protein_coding retained_intron MGP_LPJ_T0015672.1 MGP_LPJ_G0013763.1 mouse_genomes_project 7 14462173 14462946 + processed_pseudogene processed_pseudogene MGP_LPJ_T0083882.1 MGP_LPJ_G0032219.1 mouse_genomes_project 7 57659472 57698867 + MGP_LPJ_P0083882 Tubgcp5 protein_coding protein_coding MGP_LPJ_T0083883.1 MGP_LPJ_G0032219.1 mouse_genomes_project 7 57659483 57693696 + Tubgcp5 protein_coding retained_intron MGP_LPJ_T0083884.1 MGP_LPJ_G0032219.1 mouse_genomes_project 7 57659486 57698636 + MGP_LPJ_P0083884 Tubgcp5 protein_coding nonsense_mediated_decay MGP_LPJ_T0083885.1 MGP_LPJ_G0032219.1 mouse_genomes_project 7 57659509 57698636 + MGP_LPJ_P0083885 Tubgcp5 protein_coding protein_coding MGP_LPJ_T0083886.1 MGP_LPJ_G0032219.1 mouse_genomes_project 7 57659543 57664231 + MGP_LPJ_P0083886 Tubgcp5 protein_coding protein_coding MGP_LPJ_T0083887.1 MGP_LPJ_G0032219.1 mouse_genomes_project 7 57669937 57674263 + Tubgcp5 protein_coding retained_intron MGP_LPJ_T0083888.1 MGP_LPJ_G0032219.1 mouse_genomes_project 7 57671590 57683099 + Tubgcp5 protein_coding retained_intron MGP_LPJ_T0083889.1 MGP_LPJ_G0032219.1 mouse_genomes_project 7 57682647 57684363 + Tubgcp5 protein_coding retained_intron MGP_LPJ_T0083890.1 MGP_LPJ_G0032219.1 mouse_genomes_project 7 57686965 57698125 + Tubgcp5 protein_coding retained_intron MGP_LPJ_T0083891.1 MGP_LPJ_G0032219.1 mouse_genomes_project 7 57692877 57698427 + MGP_LPJ_P0083891 Tubgcp5 protein_coding nonsense_mediated_decay MGP_LPJ_T0099695.1 MGP_LPJ_G0037958.1 mouse_genomes_project 7 14597710 14597813 - Gm24708 snRNA snRNA MGP_LPJ_T0081775.1 MGP_LPJ_G0031679.1 mouse_genomes_project 7 17733721 17744249 + MGP_LPJ_P0081775 Ckm protein_coding protein_coding MGP_LPJ_T0005226.1 MGP_LPJ_G0004448.1 mouse_genomes_project 7 35282076 35283636 + B230322F03Rik antisense antisense MGP_LPJ_T0085512.1 MGP_LPJ_G0032696.1 mouse_genomes_project 7 111893017 111899471 - MGP_LPJ_P0085512 Olfr709-ps1 protein_coding protein_coding MGP_LPJ_T0083448.1 MGP_LPJ_G0032091.1 mouse_genomes_project 7 45769862 45785498 - MGP_LPJ_P0083448 Med25 protein_coding protein_coding MGP_LPJ_T0081387.1 MGP_LPJ_G0031561.1 mouse_genomes_project 7 10468666 10474226 + MGP_LPJ_P0081387 Zfp446 protein_coding protein_coding MGP_LPJ_T0081388.1 MGP_LPJ_G0031561.1 mouse_genomes_project 7 10468666 10475139 + MGP_LPJ_P0081388 Zfp446 protein_coding protein_coding MGP_LPJ_T0081389.1 MGP_LPJ_G0031561.1 mouse_genomes_project 7 10468666 10474226 + MGP_LPJ_P0081389 Zfp446 protein_coding protein_coding MGP_LPJ_T0081390.1 MGP_LPJ_G0031561.1 mouse_genomes_project 7 10468711 10472293 + Zfp446 protein_coding retained_intron MGP_LPJ_T0081391.1 MGP_LPJ_G0031561.1 mouse_genomes_project 7 10469058 10475145 + MGP_LPJ_P0081391 Zfp446 protein_coding protein_coding MGP_LPJ_T0081392.1 MGP_LPJ_G0031561.1 mouse_genomes_project 7 10470340 10475170 + Zfp446 protein_coding retained_intron MGP_LPJ_T0010879.1 MGP_LPJ_G0008997.1 mouse_genomes_project 7 29904206 29904264 + Mir3569 miRNA miRNA MGP_LPJ_T0008809.1 MGP_LPJ_G0007115.1 mouse_genomes_project 7 340576 342339 - 3300002P13Rik lincRNA lincRNA MGP_LPJ_T0087109.1 MGP_LPJ_G0033069.1 mouse_genomes_project 7 146442598 146486960 + MGP_LPJ_P0087109 Adgra1 protein_coding protein_coding MGP_LPJ_T0087110.1 MGP_LPJ_G0033069.1 mouse_genomes_project 7 146442789 146454007 + Adgra1 protein_coding processed_transcript MGP_LPJ_T0087111.1 MGP_LPJ_G0033069.1 mouse_genomes_project 7 146443386 146449616 + Adgra1 protein_coding retained_intron MGP_LPJ_T0087387.1 MGP_LPJ_G0033147.1 mouse_genomes_project 7 148131841 148136764 + MGP_LPJ_P0087387 Rplp2 protein_coding protein_coding MGP_LPJ_T0087388.1 MGP_LPJ_G0033147.1 mouse_genomes_project 7 148132089 148135790 + MGP_LPJ_P0087388 Rplp2 protein_coding unknown_likely_coding MGP_LPJ_T0087389.1 MGP_LPJ_G0033147.1 mouse_genomes_project 7 148132102 148133088 + Rplp2 protein_coding retained_intron MGP_LPJ_T0087390.1 MGP_LPJ_G0033147.1 mouse_genomes_project 7 148132140 148133499 + Rplp2 protein_coding retained_intron MGP_LPJ_T0087391.1 MGP_LPJ_G0033147.1 mouse_genomes_project 7 148132183 148136529 + MGP_LPJ_P0087391 Rplp2 protein_coding protein_coding MGP_LPJ_T0087392.1 MGP_LPJ_G0033147.1 mouse_genomes_project 7 148132321 148136529 + MGP_LPJ_P0087392 Rplp2 protein_coding protein_coding MGP_LPJ_T0087393.1 MGP_LPJ_G0033147.1 mouse_genomes_project 7 148136000 148136528 + Rplp2 protein_coding processed_transcript MGP_LPJ_T0085503.1 MGP_LPJ_G0032688.1 mouse_genomes_project 7 111773694 111780265 + MGP_LPJ_P0085503 Olfr701 protein_coding protein_coding MGP_LPJ_T0085504.1 MGP_LPJ_G0032688.1 mouse_genomes_project 7 111773729 111778690 + MGP_LPJ_P0085504 Olfr701 protein_coding protein_coding MGP_LPJ_T0010951.1 MGP_LPJ_G0009069.1 mouse_genomes_project 7 146586336 146586393 - Mir7686 miRNA miRNA MGP_LPJ_T0087244.1 MGP_LPJ_G0033122.1 mouse_genomes_project 7 147666207 147667288 - MGP_LPJ_P0087244 Ifitm6 protein_coding protein_coding MGP_LPJ_T0015858.1 MGP_LPJ_G0013949.1 mouse_genomes_project 7 128576500 128577011 + processed_pseudogene processed_pseudogene MGP_LPJ_T0081192.1 MGP_LPJ_G0031464.1 mouse_genomes_project 7 1790033 1812347 - MGP_LPJ_P0081192 Fam71e2 protein_coding nonsense_mediated_decay MGP_LPJ_T0081193.1 MGP_LPJ_G0031464.1 mouse_genomes_project 7 1790036 1812347 - MGP_LPJ_P0081193 Fam71e2 protein_coding protein_coding MGP_LPJ_T0083627.1 MGP_LPJ_G0032144.1 mouse_genomes_project 7 46656001 46677517 - MGP_LPJ_P0083627 Fut2 protein_coding protein_coding MGP_LPJ_T0002242.1 MGP_LPJ_G0002151.1 mouse_genomes_project 7 37526578 37529838 - TEC TEC MGP_LPJ_T0015647.1 MGP_LPJ_G0013738.1 mouse_genomes_project 7 1645287 1646040 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102425.1 MGP_LPJ_G0040461.1 mouse_genomes_project 7 89302418 89302738 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002319.1 MGP_LPJ_G0002227.1 mouse_genomes_project 7 127607086 127609762 + TEC TEC MGP_LPJ_T0010913.1 MGP_LPJ_G0009031.1 mouse_genomes_project 7 64248795 64248866 - Mir344g miRNA miRNA MGP_LPJ_T0087228.1 MGP_LPJ_G0033116.1 mouse_genomes_project 7 147562815 147570454 + MGP_LPJ_P0087228 Nlrp6 protein_coding protein_coding MGP_LPJ_T0087229.1 MGP_LPJ_G0033116.1 mouse_genomes_project 7 147562815 147571106 + MGP_LPJ_P0087229 Nlrp6 protein_coding protein_coding MGP_LPJ_T0087230.1 MGP_LPJ_G0033116.1 mouse_genomes_project 7 147562984 147569463 + MGP_LPJ_P0087230 Nlrp6 protein_coding protein_coding MGP_LPJ_T0087231.1 MGP_LPJ_G0033116.1 mouse_genomes_project 7 147564019 147564769 + Nlrp6 protein_coding retained_intron MGP_LPJ_T0008813.1 MGP_LPJ_G0007119.1 mouse_genomes_project 7 990529 992257 + 1700095K22Rik lincRNA lincRNA MGP_LPJ_T0018390.1 MGP_LPJ_G0015621.1 mouse_genomes_project 7 149821549 149853138 - R74862 processed_transcript processed_transcript MGP_LPJ_T0018391.1 MGP_LPJ_G0015621.1 mouse_genomes_project 7 149832374 149853407 - R74862 processed_transcript processed_transcript MGP_LPJ_T0018392.1 MGP_LPJ_G0015621.1 mouse_genomes_project 7 149833037 149853398 - R74862 processed_transcript processed_transcript MGP_LPJ_T0008840.1 MGP_LPJ_G0007142.1 mouse_genomes_project 7 30278034 30309280 + Gm44662 lincRNA lincRNA MGP_LPJ_T0002257.1 MGP_LPJ_G0002166.1 mouse_genomes_project 7 56859603 56861777 + TEC TEC MGP_LPJ_T0085257.1 MGP_LPJ_G0032562.1 mouse_genomes_project 7 107804053 107804998 - MGP_LPJ_P0085257 protein_coding protein_coding MGP_LPJ_T0082322.1 MGP_LPJ_G0031831.1 mouse_genomes_project 7 27062924 27086569 - MGP_LPJ_P0082322 protein_coding protein_coding MGP_LPJ_T0082323.1 MGP_LPJ_G0031831.1 mouse_genomes_project 7 27062926 27063867 - MGP_LPJ_P0082323 protein_coding protein_coding MGP_LPJ_T0008893.1 MGP_LPJ_G0007183.1 mouse_genomes_project 7 66361390 66382299 + Gm45055 lincRNA lincRNA MGP_LPJ_T0008894.1 MGP_LPJ_G0007183.1 mouse_genomes_project 7 66367285 66382269 + Gm45055 lincRNA lincRNA MGP_LPJ_T0087053.1 MGP_LPJ_G0033058.1 mouse_genomes_project 7 145380273 145392748 - MGP_LPJ_P0087053 Mapk1ip1 protein_coding protein_coding MGP_LPJ_T0087054.1 MGP_LPJ_G0033058.1 mouse_genomes_project 7 145380283 145392735 - MGP_LPJ_P0087054 Mapk1ip1 protein_coding protein_coding MGP_LPJ_T0087055.1 MGP_LPJ_G0033058.1 mouse_genomes_project 7 145380328 145392732 - MGP_LPJ_P0087055 Mapk1ip1 protein_coding protein_coding MGP_LPJ_T0102446.1 MGP_LPJ_G0040482.1 mouse_genomes_project 7 108136251 108137186 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0084329.1 MGP_LPJ_G0032303.1 mouse_genomes_project 7 82978666 82981379 + MGP_LPJ_P0084329 Mesp2 protein_coding protein_coding MGP_LPJ_T0011719.1 MGP_LPJ_G0009837.1 mouse_genomes_project 7 150268586 150268647 + Gm27901 misc_RNA misc_RNA MGP_LPJ_T0086598.1 MGP_LPJ_G0032962.1 mouse_genomes_project 7 133424636 133430849 - MGP_LPJ_P0086598 Ccdc189 protein_coding protein_coding MGP_LPJ_T0086599.1 MGP_LPJ_G0032962.1 mouse_genomes_project 7 133425613 133428594 - MGP_LPJ_P0086599 Ccdc189 protein_coding protein_coding MGP_LPJ_T0086600.1 MGP_LPJ_G0032962.1 mouse_genomes_project 7 133425640 133427976 - Ccdc189 protein_coding retained_intron MGP_LPJ_T0086601.1 MGP_LPJ_G0032962.1 mouse_genomes_project 7 133427466 133430423 - Ccdc189 protein_coding retained_intron MGP_LPJ_T0086602.1 MGP_LPJ_G0032962.1 mouse_genomes_project 7 133429317 133430634 - Ccdc189 protein_coding retained_intron MGP_LPJ_T0085632.1 MGP_LPJ_G0032768.1 mouse_genomes_project 7 114961315 114977879 - MGP_LPJ_P0085632 Tmem41b protein_coding protein_coding MGP_LPJ_T0085633.1 MGP_LPJ_G0032768.1 mouse_genomes_project 7 114967933 114977959 - MGP_LPJ_P0085633 Tmem41b protein_coding nonsense_mediated_decay MGP_LPJ_T0085634.1 MGP_LPJ_G0032768.1 mouse_genomes_project 7 114967933 114978072 - MGP_LPJ_P0085634 Tmem41b protein_coding nonsense_mediated_decay MGP_LPJ_T0085635.1 MGP_LPJ_G0032768.1 mouse_genomes_project 7 114968000 114978046 - MGP_LPJ_P0085635 Tmem41b protein_coding nonsense_mediated_decay MGP_LPJ_T0085636.1 MGP_LPJ_G0032768.1 mouse_genomes_project 7 114971350 114978056 - Tmem41b protein_coding retained_intron MGP_LPJ_T0005171.1 MGP_LPJ_G0004408.1 mouse_genomes_project 7 1659895 1663471 + Gm44877 antisense antisense MGP_LPJ_T0099726.1 MGP_LPJ_G0037989.1 mouse_genomes_project 7 108817622 108817722 - Gm27995 snRNA snRNA MGP_LPJ_T0085877.1 MGP_LPJ_G0032817.1 mouse_genomes_project 7 123841296 123894640 - MGP_LPJ_P0085877 Tmc7 protein_coding protein_coding MGP_LPJ_T0085878.1 MGP_LPJ_G0032817.1 mouse_genomes_project 7 123851784 123894588 - Tmc7 protein_coding retained_intron MGP_LPJ_T0085879.1 MGP_LPJ_G0032817.1 mouse_genomes_project 7 123873368 123876115 - Tmc7 protein_coding retained_intron MGP_LPJ_T0085880.1 MGP_LPJ_G0032817.1 mouse_genomes_project 7 123881421 123894613 - Tmc7 protein_coding processed_transcript MGP_LPJ_T0099740.1 MGP_LPJ_G0038003.1 mouse_genomes_project 7 132310873 132310980 - Gm24596 snRNA snRNA MGP_LPJ_T0083963.1 MGP_LPJ_G0032235.1 mouse_genomes_project 7 64746592 64749097 - MGP_LPJ_P0083963 Peg12 protein_coding protein_coding MGP_LPJ_T0005322.1 MGP_LPJ_G0004514.1 mouse_genomes_project 7 133446152 133446698 - 1700120K04Rik antisense antisense MGP_LPJ_T0086825.1 MGP_LPJ_G0033005.1 mouse_genomes_project 7 135548510 135595737 + MGP_LPJ_P0086825 Wdr11 protein_coding protein_coding MGP_LPJ_T0086826.1 MGP_LPJ_G0033005.1 mouse_genomes_project 7 135548555 135585668 + Wdr11 protein_coding retained_intron MGP_LPJ_T0086827.1 MGP_LPJ_G0033005.1 mouse_genomes_project 7 135548565 135572264 + Wdr11 protein_coding retained_intron MGP_LPJ_T0086828.1 MGP_LPJ_G0033005.1 mouse_genomes_project 7 135549704 135592855 + MGP_LPJ_P0086828 Wdr11 protein_coding nonsense_mediated_decay MGP_LPJ_T0086829.1 MGP_LPJ_G0033005.1 mouse_genomes_project 7 135562032 135567770 + Wdr11 protein_coding processed_transcript MGP_LPJ_T0086830.1 MGP_LPJ_G0033005.1 mouse_genomes_project 7 135563511 135595735 + Wdr11 protein_coding retained_intron MGP_LPJ_T0086831.1 MGP_LPJ_G0033005.1 mouse_genomes_project 7 135567768 135574024 + MGP_LPJ_P0086831 Wdr11 protein_coding protein_coding MGP_LPJ_T0086832.1 MGP_LPJ_G0033005.1 mouse_genomes_project 7 135585076 135595733 + Wdr11 protein_coding retained_intron MGP_LPJ_T0086833.1 MGP_LPJ_G0033005.1 mouse_genomes_project 7 135589051 135593670 + MGP_LPJ_P0086833 Wdr11 protein_coding nonsense_mediated_decay MGP_LPJ_T0081343.1 MGP_LPJ_G0031542.1 mouse_genomes_project 7 9703415 9704336 - MGP_LPJ_P0081343 Vmn1r81 protein_coding protein_coding MGP_LPJ_T0015664.1 MGP_LPJ_G0013755.1 mouse_genomes_project 7 11162710 11166143 + processed_pseudogene processed_pseudogene MGP_LPJ_T0083930.1 MGP_LPJ_G0032225.1 mouse_genomes_project 7 58603500 59315949 - MGP_LPJ_P0083930 Gabrg3 protein_coding protein_coding MGP_LPJ_T0083931.1 MGP_LPJ_G0032225.1 mouse_genomes_project 7 59094205 59315632 - MGP_LPJ_P0083931 Gabrg3 protein_coding protein_coding MGP_LPJ_T0083932.1 MGP_LPJ_G0032225.1 mouse_genomes_project 7 59250618 59315949 - Gabrg3 protein_coding retained_intron MGP_LPJ_T0086487.1 MGP_LPJ_G0032939.1 mouse_genomes_project 7 132924247 132931542 - MGP_LPJ_P0086487 Spn protein_coding nonsense_mediated_decay MGP_LPJ_T0086488.1 MGP_LPJ_G0032939.1 mouse_genomes_project 7 132925485 132930294 - MGP_LPJ_P0086488 Spn protein_coding protein_coding MGP_LPJ_T0086489.1 MGP_LPJ_G0032939.1 mouse_genomes_project 7 132925717 132931551 - MGP_LPJ_P0086489 Spn protein_coding protein_coding MGP_LPJ_T0081646.1 MGP_LPJ_G0031645.1 mouse_genomes_project 7 16938974 16944822 - MGP_LPJ_P0081646 Psg20 protein_coding protein_coding MGP_LPJ_T0087394.1 MGP_LPJ_G0033148.1 mouse_genomes_project 7 148140558 148146129 + MGP_LPJ_P0087394 Pnpla2 protein_coding protein_coding MGP_LPJ_T0087395.1 MGP_LPJ_G0033148.1 mouse_genomes_project 7 148140566 148145478 + MGP_LPJ_P0087395 Pnpla2 protein_coding nonsense_mediated_decay MGP_LPJ_T0087396.1 MGP_LPJ_G0033148.1 mouse_genomes_project 7 148140567 148145480 + MGP_LPJ_P0087396 Pnpla2 protein_coding protein_coding MGP_LPJ_T0087397.1 MGP_LPJ_G0033148.1 mouse_genomes_project 7 148140579 148144324 + MGP_LPJ_P0087397 Pnpla2 protein_coding protein_coding MGP_LPJ_T0087398.1 MGP_LPJ_G0033148.1 mouse_genomes_project 7 148140589 148145489 + MGP_LPJ_P0087398 Pnpla2 protein_coding nonsense_mediated_decay MGP_LPJ_T0087399.1 MGP_LPJ_G0033148.1 mouse_genomes_project 7 148140967 148143512 + MGP_LPJ_P0087399 Pnpla2 protein_coding protein_coding MGP_LPJ_T0087400.1 MGP_LPJ_G0033148.1 mouse_genomes_project 7 148142378 148144072 + MGP_LPJ_P0087400 Pnpla2 protein_coding nonsense_mediated_decay MGP_LPJ_T0010872.1 MGP_LPJ_G0008990.1 mouse_genomes_project 7 27694389 27694449 - Mir7049 miRNA miRNA MGP_LPJ_T0083964.1 MGP_LPJ_G0032236.1 mouse_genomes_project 7 65403227 65523535 - MGP_LPJ_P0083964 Chrna7 protein_coding protein_coding MGP_LPJ_T0002276.1 MGP_LPJ_G0002185.1 mouse_genomes_project 7 76203770 76205431 + TEC TEC MGP_LPJ_T0083258.1 MGP_LPJ_G0032049.1 mouse_genomes_project 7 44613446 44618193 + MGP_LPJ_P0083258 Klk5 protein_coding protein_coding MGP_LPJ_T0083259.1 MGP_LPJ_G0032049.1 mouse_genomes_project 7 44613744 44625447 + MGP_LPJ_P0083259 Klk5 protein_coding protein_coding MGP_LPJ_T0099703.1 MGP_LPJ_G0037966.1 mouse_genomes_project 7 38079773 38079831 - Gm22203 snRNA snRNA MGP_LPJ_T0081832.1 MGP_LPJ_G0031698.1 mouse_genomes_project 7 18114554 18128609 - MGP_LPJ_P0081832 Bcam protein_coding protein_coding MGP_LPJ_T0081833.1 MGP_LPJ_G0031698.1 mouse_genomes_project 7 18114983 18115378 - Bcam protein_coding retained_intron MGP_LPJ_T0081834.1 MGP_LPJ_G0031698.1 mouse_genomes_project 7 18121721 18128557 - Bcam protein_coding retained_intron MGP_LPJ_T0081835.1 MGP_LPJ_G0031698.1 mouse_genomes_project 7 18123640 18129078 - MGP_LPJ_P0081835 Bcam protein_coding protein_coding MGP_LPJ_T0081836.1 MGP_LPJ_G0031698.1 mouse_genomes_project 7 18125020 18128557 - MGP_LPJ_P0081836 Bcam protein_coding nonsense_mediated_decay MGP_LPJ_T0087511.1 MGP_LPJ_G0033175.1 mouse_genomes_project 7 149258496 149274188 - MGP_LPJ_P0087511 protein_coding protein_coding MGP_LPJ_T0087512.1 MGP_LPJ_G0033175.1 mouse_genomes_project 7 149260172 149264394 - protein_coding processed_transcript MGP_LPJ_T0015669.1 MGP_LPJ_G0013760.1 mouse_genomes_project 7 11810213 11812373 - processed_pseudogene processed_pseudogene MGP_LPJ_T0087426.1 MGP_LPJ_G0033154.1 mouse_genomes_project 7 148251311 148326662 + MGP_LPJ_P0087426 Ap2a2 protein_coding protein_coding MGP_LPJ_T0087427.1 MGP_LPJ_G0033154.1 mouse_genomes_project 7 148251346 148296637 + Ap2a2 protein_coding retained_intron MGP_LPJ_T0087428.1 MGP_LPJ_G0033154.1 mouse_genomes_project 7 148251668 148292337 + MGP_LPJ_P0087428 Ap2a2 protein_coding protein_coding MGP_LPJ_T0083261.1 MGP_LPJ_G0032051.1 mouse_genomes_project 7 44727672 44734959 + MGP_LPJ_P0083261 Klk15 protein_coding protein_coding MGP_LPJ_T0083262.1 MGP_LPJ_G0032051.1 mouse_genomes_project 7 44727725 44734050 + MGP_LPJ_P0083262 Klk15 protein_coding protein_coding MGP_LPJ_T0100946.1 MGP_LPJ_G0039209.1 mouse_genomes_project 7 34626631 34626761 - Gm25922 snoRNA snoRNA MGP_LPJ_T0008918.1 MGP_LPJ_G0007200.1 mouse_genomes_project 7 74053616 74063073 + lincRNA lincRNA MGP_LPJ_T0102408.1 MGP_LPJ_G0040444.1 mouse_genomes_project 7 50250489 50251483 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0084159.1 MGP_LPJ_G0032275.1 mouse_genomes_project 7 76208159 76332078 - MGP_LPJ_P0084159 Chd2 protein_coding protein_coding MGP_LPJ_T0084160.1 MGP_LPJ_G0032275.1 mouse_genomes_project 7 76208215 76251472 - MGP_LPJ_P0084160 Chd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0084161.1 MGP_LPJ_G0032275.1 mouse_genomes_project 7 76211509 76229188 - MGP_LPJ_P0084161 Chd2 protein_coding protein_coding MGP_LPJ_T0084162.1 MGP_LPJ_G0032275.1 mouse_genomes_project 7 76231198 76237547 - MGP_LPJ_P0084162 Chd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0084163.1 MGP_LPJ_G0032275.1 mouse_genomes_project 7 76233767 76243693 - Chd2 protein_coding processed_transcript MGP_LPJ_T0084164.1 MGP_LPJ_G0032275.1 mouse_genomes_project 7 76257469 76263896 - Chd2 protein_coding processed_transcript MGP_LPJ_T0084165.1 MGP_LPJ_G0032275.1 mouse_genomes_project 7 76257475 76263898 - MGP_LPJ_P0084165 Chd2 protein_coding protein_coding MGP_LPJ_T0084166.1 MGP_LPJ_G0032275.1 mouse_genomes_project 7 76257476 76261722 - Chd2 protein_coding retained_intron MGP_LPJ_T0084167.1 MGP_LPJ_G0032275.1 mouse_genomes_project 7 76282598 76287009 - MGP_LPJ_P0084167 Chd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0084168.1 MGP_LPJ_G0032275.1 mouse_genomes_project 7 76284533 76286928 - MGP_LPJ_P0084168 Chd2 protein_coding protein_coding MGP_LPJ_T0084169.1 MGP_LPJ_G0032275.1 mouse_genomes_project 7 76285871 76332077 - MGP_LPJ_P0084169 Chd2 protein_coding protein_coding MGP_LPJ_T0084170.1 MGP_LPJ_G0032275.1 mouse_genomes_project 7 76286829 76288462 - Chd2 protein_coding retained_intron MGP_LPJ_T0084171.1 MGP_LPJ_G0032275.1 mouse_genomes_project 7 76292756 76327953 - MGP_LPJ_P0084171 Chd2 protein_coding protein_coding MGP_LPJ_T0084172.1 MGP_LPJ_G0032275.1 mouse_genomes_project 7 76292786 76332068 - MGP_LPJ_P0084172 Chd2 protein_coding protein_coding MGP_LPJ_T0084173.1 MGP_LPJ_G0032275.1 mouse_genomes_project 7 76328421 76332162 - Chd2 protein_coding retained_intron MGP_LPJ_T0084174.1 MGP_LPJ_G0032275.1 mouse_genomes_project 7 76329685 76332078 - Chd2 protein_coding processed_transcript MGP_LPJ_T0084175.1 MGP_LPJ_G0032275.1 mouse_genomes_project 7 76330129 76331857 - Chd2 protein_coding processed_transcript MGP_LPJ_T0018346.1 MGP_LPJ_G0015597.1 mouse_genomes_project 7 88136874 88213633 + 2610206C17Rik processed_transcript processed_transcript MGP_LPJ_T0018347.1 MGP_LPJ_G0015597.1 mouse_genomes_project 7 88212786 88213104 + 2610206C17Rik processed_transcript processed_transcript MGP_LPJ_T0080938.1 MGP_LPJ_G0031418.1 mouse_genomes_project 7 29569 39174 - AU018091 protein_coding processed_transcript MGP_LPJ_T0080939.1 MGP_LPJ_G0031418.1 mouse_genomes_project 7 29569 47689 - MGP_LPJ_P0080939 AU018091 protein_coding protein_coding MGP_LPJ_T0080940.1 MGP_LPJ_G0031418.1 mouse_genomes_project 7 36998 47594 - MGP_LPJ_P0080940 AU018091 protein_coding protein_coding MGP_LPJ_T0005310.1 MGP_LPJ_G0004504.1 mouse_genomes_project 7 127203238 127204177 + 1700069B07Rik antisense antisense MGP_LPJ_T0005311.1 MGP_LPJ_G0004504.1 mouse_genomes_project 7 127203352 127204175 + 1700069B07Rik antisense antisense MGP_LPJ_T0086340.1 MGP_LPJ_G0032914.1 mouse_genomes_project 7 132545680 132549240 + MGP_LPJ_P0086340 Ypel3 protein_coding protein_coding MGP_LPJ_T0086341.1 MGP_LPJ_G0032914.1 mouse_genomes_project 7 132545700 132549237 + MGP_LPJ_P0086341 Ypel3 protein_coding protein_coding MGP_LPJ_T0086342.1 MGP_LPJ_G0032914.1 mouse_genomes_project 7 132545703 132546827 + MGP_LPJ_P0086342 Ypel3 protein_coding protein_coding MGP_LPJ_T0086343.1 MGP_LPJ_G0032914.1 mouse_genomes_project 7 132545724 132547152 + Ypel3 protein_coding processed_transcript MGP_LPJ_T0086344.1 MGP_LPJ_G0032914.1 mouse_genomes_project 7 132545724 132549239 + Ypel3 protein_coding processed_transcript MGP_LPJ_T0086345.1 MGP_LPJ_G0032914.1 mouse_genomes_project 7 132545726 132549240 + MGP_LPJ_P0086345 Ypel3 protein_coding protein_coding MGP_LPJ_T0086346.1 MGP_LPJ_G0032914.1 mouse_genomes_project 7 132545730 132548791 + MGP_LPJ_P0086346 Ypel3 protein_coding protein_coding MGP_LPJ_T0086347.1 MGP_LPJ_G0032914.1 mouse_genomes_project 7 132545872 132546600 + MGP_LPJ_P0086347 Ypel3 protein_coding protein_coding MGP_LPJ_T0086348.1 MGP_LPJ_G0032914.1 mouse_genomes_project 7 132545938 132549172 + MGP_LPJ_P0086348 Ypel3 protein_coding protein_coding MGP_LPJ_T0086349.1 MGP_LPJ_G0032914.1 mouse_genomes_project 7 132546233 132548957 + Ypel3 protein_coding processed_transcript MGP_LPJ_T0086350.1 MGP_LPJ_G0032914.1 mouse_genomes_project 7 132546306 132547019 + Ypel3 protein_coding retained_intron MGP_LPJ_T0008957.1 MGP_LPJ_G0007228.1 mouse_genomes_project 7 82673971 82703361 + Gm35040 lincRNA lincRNA MGP_LPJ_T0086749.1 MGP_LPJ_G0032993.1 mouse_genomes_project 7 134124792 134125547 + Armc5 protein_coding processed_transcript MGP_LPJ_T0086750.1 MGP_LPJ_G0032993.1 mouse_genomes_project 7 134124807 134132245 + MGP_LPJ_P0086750 Armc5 protein_coding protein_coding MGP_LPJ_T0099744.1 MGP_LPJ_G0038007.1 mouse_genomes_project 7 134644095 134644197 + Gm23783 snRNA snRNA MGP_LPJ_T0083616.1 MGP_LPJ_G0032139.1 mouse_genomes_project 7 46618068 46619651 - MGP_LPJ_P0083616 Fgf21 protein_coding protein_coding MGP_LPJ_T0085544.1 MGP_LPJ_G0032721.1 mouse_genomes_project 7 112918024 112919116 + MGP_LPJ_P0085544 Olfr477 protein_coding protein_coding MGP_LPJ_T0015877.1 MGP_LPJ_G0013968.1 mouse_genomes_project 7 134242234 134242429 + processed_pseudogene processed_pseudogene MGP_LPJ_T0081671.1 MGP_LPJ_G0031655.1 mouse_genomes_project 7 17288338 17291074 + MGP_LPJ_P0081671 Irf2bp1 protein_coding protein_coding MGP_LPJ_T0083053.1 MGP_LPJ_G0031991.1 mouse_genomes_project 7 35193870 35264395 - MGP_LPJ_P0083053 protein_coding protein_coding MGP_LPJ_T0083054.1 MGP_LPJ_G0031991.1 mouse_genomes_project 7 35195963 35264396 - MGP_LPJ_P0083054 protein_coding protein_coding MGP_LPJ_T0083055.1 MGP_LPJ_G0031991.1 mouse_genomes_project 7 35218296 35264551 - MGP_LPJ_P0083055 protein_coding protein_coding MGP_LPJ_T0083056.1 MGP_LPJ_G0031991.1 mouse_genomes_project 7 35218299 35264603 - MGP_LPJ_P0083056 protein_coding protein_coding MGP_LPJ_T0083057.1 MGP_LPJ_G0031991.1 mouse_genomes_project 7 35218328 35230544 - MGP_LPJ_P0083057 protein_coding protein_coding MGP_LPJ_T0083058.1 MGP_LPJ_G0031991.1 mouse_genomes_project 7 35234307 35264551 - MGP_LPJ_P0083058 protein_coding protein_coding MGP_LPJ_T0086287.1 MGP_LPJ_G0032906.1 mouse_genomes_project 7 132372820 132375248 - MGP_LPJ_P0086287 Nupr1 protein_coding protein_coding MGP_LPJ_T0086288.1 MGP_LPJ_G0032906.1 mouse_genomes_project 7 132372823 132376582 - Nupr1 protein_coding retained_intron MGP_LPJ_T0086289.1 MGP_LPJ_G0032906.1 mouse_genomes_project 7 132372849 132374916 - MGP_LPJ_P0086289 Nupr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0086290.1 MGP_LPJ_G0032906.1 mouse_genomes_project 7 132373013 132375047 - MGP_LPJ_P0086290 Nupr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0086291.1 MGP_LPJ_G0032906.1 mouse_genomes_project 7 132374519 132380208 - Nupr1 protein_coding processed_transcript MGP_LPJ_T0086292.1 MGP_LPJ_G0032906.1 mouse_genomes_project 7 132374519 132375588 - Nupr1 protein_coding processed_transcript MGP_LPJ_T0084284.1 MGP_LPJ_G0032295.1 mouse_genomes_project 7 82581953 82603176 - MGP_LPJ_P0084284 Polg protein_coding protein_coding MGP_LPJ_T0084285.1 MGP_LPJ_G0032295.1 mouse_genomes_project 7 82585103 82587357 - MGP_LPJ_P0084285 Polg protein_coding protein_coding MGP_LPJ_T0084286.1 MGP_LPJ_G0032295.1 mouse_genomes_project 7 82585104 82590803 - Polg protein_coding retained_intron MGP_LPJ_T0084287.1 MGP_LPJ_G0032295.1 mouse_genomes_project 7 82585104 82603001 - Polg protein_coding retained_intron MGP_LPJ_T0084288.1 MGP_LPJ_G0032295.1 mouse_genomes_project 7 82585104 82586340 - MGP_LPJ_P0084288 Polg protein_coding protein_coding MGP_LPJ_T0084289.1 MGP_LPJ_G0032295.1 mouse_genomes_project 7 82585285 82602994 - MGP_LPJ_P0084289 Polg protein_coding nonsense_mediated_decay MGP_LPJ_T0084290.1 MGP_LPJ_G0032295.1 mouse_genomes_project 7 82585299 82603012 - MGP_LPJ_P0084290 Polg protein_coding nonsense_mediated_decay MGP_LPJ_T0084291.1 MGP_LPJ_G0032295.1 mouse_genomes_project 7 82585888 82587803 - Polg protein_coding retained_intron MGP_LPJ_T0084292.1 MGP_LPJ_G0032295.1 mouse_genomes_project 7 82587309 82587645 - MGP_LPJ_P0084292 Polg protein_coding protein_coding MGP_LPJ_T0084293.1 MGP_LPJ_G0032295.1 mouse_genomes_project 7 82587322 82589509 - MGP_LPJ_P0084293 Polg protein_coding protein_coding MGP_LPJ_T0084294.1 MGP_LPJ_G0032295.1 mouse_genomes_project 7 82587652 82590063 - Polg protein_coding retained_intron MGP_LPJ_T0084295.1 MGP_LPJ_G0032295.1 mouse_genomes_project 7 82589668 82591788 - Polg protein_coding retained_intron MGP_LPJ_T0084296.1 MGP_LPJ_G0032295.1 mouse_genomes_project 7 82590253 82591117 - Polg protein_coding retained_intron MGP_LPJ_T0084297.1 MGP_LPJ_G0032295.1 mouse_genomes_project 7 82591208 82595164 - MGP_LPJ_P0084297 Polg protein_coding protein_coding MGP_LPJ_T0084298.1 MGP_LPJ_G0032295.1 mouse_genomes_project 7 82591792 82595519 - MGP_LPJ_P0084298 Polg protein_coding protein_coding MGP_LPJ_T0084299.1 MGP_LPJ_G0032295.1 mouse_genomes_project 7 82595244 82597527 - Polg protein_coding processed_transcript MGP_LPJ_T0084300.1 MGP_LPJ_G0032295.1 mouse_genomes_project 7 82600729 82603008 - Polg protein_coding retained_intron MGP_LPJ_T0084301.1 MGP_LPJ_G0032295.1 mouse_genomes_project 7 82601708 82602884 - MGP_LPJ_P0084301 Polg protein_coding protein_coding MGP_LPJ_T0102303.1 MGP_LPJ_G0040340.1 mouse_genomes_project 7 9364901 9365189 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0083767.1 MGP_LPJ_G0032181.1 mouse_genomes_project 7 47941726 47952240 + MGP_LPJ_P0083767 Ldha protein_coding protein_coding MGP_LPJ_T0083768.1 MGP_LPJ_G0032181.1 mouse_genomes_project 7 47946084 47955869 + MGP_LPJ_P0083768 Ldha protein_coding protein_coding MGP_LPJ_T0083769.1 MGP_LPJ_G0032181.1 mouse_genomes_project 7 47946088 47949291 + Ldha protein_coding processed_transcript MGP_LPJ_T0083770.1 MGP_LPJ_G0032181.1 mouse_genomes_project 7 47946088 47948391 + Ldha protein_coding retained_intron MGP_LPJ_T0083771.1 MGP_LPJ_G0032181.1 mouse_genomes_project 7 47946108 47952249 + MGP_LPJ_P0083771 Ldha protein_coding protein_coding MGP_LPJ_T0083772.1 MGP_LPJ_G0032181.1 mouse_genomes_project 7 47946342 47949297 + Ldha protein_coding processed_transcript MGP_LPJ_T0083773.1 MGP_LPJ_G0032181.1 mouse_genomes_project 7 47947376 47955868 + MGP_LPJ_P0083773 Ldha protein_coding protein_coding MGP_LPJ_T0083774.1 MGP_LPJ_G0032181.1 mouse_genomes_project 7 47947750 47951242 + Ldha protein_coding retained_intron MGP_LPJ_T0085212.1 MGP_LPJ_G0032521.1 mouse_genomes_project 7 106930009 106930960 + MGP_LPJ_P0085212 Olfr549 protein_coding protein_coding MGP_LPJ_T0101003.1 MGP_LPJ_G0039266.1 mouse_genomes_project 7 148133274 148133411 + Snora52 snoRNA snoRNA MGP_LPJ_T0087605.1 MGP_LPJ_G0033188.1 mouse_genomes_project 7 150279353 150282054 - MGP_LPJ_P0087605 Cdkn1c protein_coding protein_coding MGP_LPJ_T0087606.1 MGP_LPJ_G0033188.1 mouse_genomes_project 7 150279353 150282054 - MGP_LPJ_P0087606 Cdkn1c protein_coding protein_coding MGP_LPJ_T0081665.1 MGP_LPJ_G0031651.1 mouse_genomes_project 7 17205235 17248436 + MGP_LPJ_P0081665 protein_coding protein_coding MGP_LPJ_T0008816.1 MGP_LPJ_G0007121.1 mouse_genomes_project 7 10449511 10451926 + Gm29638 lincRNA lincRNA MGP_LPJ_T0081080.1 MGP_LPJ_G0031444.1 mouse_genomes_project 7 1163891 1166351 - MGP_LPJ_P0081080 Leng9 protein_coding protein_coding MGP_LPJ_T0015718.1 MGP_LPJ_G0013809.1 mouse_genomes_project 7 33802517 33802850 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010909.1 MGP_LPJ_G0009027.1 mouse_genomes_project 7 64043247 64043310 - Mir344b miRNA miRNA MGP_LPJ_T0015759.1 MGP_LPJ_G0013850.1 mouse_genomes_project 7 57314200 57314746 + processed_pseudogene processed_pseudogene MGP_LPJ_T0086104.1 MGP_LPJ_G0032876.1 mouse_genomes_project 7 128691503 128730017 + Tnrc6a protein_coding processed_transcript MGP_LPJ_T0086105.1 MGP_LPJ_G0032876.1 mouse_genomes_project 7 128691795 128762865 + MGP_LPJ_P0086105 Tnrc6a protein_coding protein_coding MGP_LPJ_T0086106.1 MGP_LPJ_G0032876.1 mouse_genomes_project 7 128691799 128764179 + MGP_LPJ_P0086106 Tnrc6a protein_coding protein_coding MGP_LPJ_T0086107.1 MGP_LPJ_G0032876.1 mouse_genomes_project 7 128691874 128745032 + MGP_LPJ_P0086107 Tnrc6a protein_coding nonsense_mediated_decay MGP_LPJ_T0086108.1 MGP_LPJ_G0032876.1 mouse_genomes_project 7 128736461 128738244 + Tnrc6a protein_coding retained_intron MGP_LPJ_T0086109.1 MGP_LPJ_G0032876.1 mouse_genomes_project 7 128737970 128762856 + MGP_LPJ_P0086109 Tnrc6a protein_coding protein_coding MGP_LPJ_T0086110.1 MGP_LPJ_G0032876.1 mouse_genomes_project 7 128738726 128743038 + Tnrc6a protein_coding retained_intron MGP_LPJ_T0086111.1 MGP_LPJ_G0032876.1 mouse_genomes_project 7 128738985 128741772 + Tnrc6a protein_coding retained_intron MGP_LPJ_T0086112.1 MGP_LPJ_G0032876.1 mouse_genomes_project 7 128740197 128741537 + Tnrc6a protein_coding retained_intron MGP_LPJ_T0086113.1 MGP_LPJ_G0032876.1 mouse_genomes_project 7 128741554 128747961 + MGP_LPJ_P0086113 Tnrc6a protein_coding protein_coding MGP_LPJ_T0086114.1 MGP_LPJ_G0032876.1 mouse_genomes_project 7 128747260 128761111 + Tnrc6a protein_coding retained_intron MGP_LPJ_T0018348.1 MGP_LPJ_G0015598.1 mouse_genomes_project 7 100913548 100960410 - C230038L03Rik processed_transcript antisense MGP_LPJ_T0018349.1 MGP_LPJ_G0015598.1 mouse_genomes_project 7 100935288 100963518 - C230038L03Rik processed_transcript processed_transcript MGP_LPJ_T0018350.1 MGP_LPJ_G0015598.1 mouse_genomes_project 7 100960953 100964858 - C230038L03Rik processed_transcript antisense MGP_LPJ_T0018351.1 MGP_LPJ_G0015598.1 mouse_genomes_project 7 100961285 100965264 - C230038L03Rik processed_transcript antisense MGP_LPJ_T0015674.1 MGP_LPJ_G0013765.1 mouse_genomes_project 7 14586546 14586661 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102352.1 MGP_LPJ_G0040388.1 mouse_genomes_project 7 33355132 33356409 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0087483.1 MGP_LPJ_G0033172.1 mouse_genomes_project 7 149201052 149206070 + Syt8 protein_coding processed_transcript MGP_LPJ_T0087484.1 MGP_LPJ_G0033172.1 mouse_genomes_project 7 149201148 149205163 + Syt8 protein_coding processed_transcript MGP_LPJ_T0087485.1 MGP_LPJ_G0033172.1 mouse_genomes_project 7 149201179 149206591 + MGP_LPJ_P0087485 Syt8 protein_coding protein_coding MGP_LPJ_T0087486.1 MGP_LPJ_G0033172.1 mouse_genomes_project 7 149201203 149206523 + Syt8 protein_coding retained_intron MGP_LPJ_T0087487.1 MGP_LPJ_G0033172.1 mouse_genomes_project 7 149201203 149206523 + MGP_LPJ_P0087487 Syt8 protein_coding protein_coding MGP_LPJ_T0087488.1 MGP_LPJ_G0033172.1 mouse_genomes_project 7 149201203 149206523 + MGP_LPJ_P0087488 Syt8 protein_coding protein_coding MGP_LPJ_T0087489.1 MGP_LPJ_G0033172.1 mouse_genomes_project 7 149203036 149206500 + MGP_LPJ_P0087489 Syt8 protein_coding protein_coding MGP_LPJ_T0087490.1 MGP_LPJ_G0033172.1 mouse_genomes_project 7 149204326 149204737 + MGP_LPJ_P0087490 Syt8 protein_coding protein_coding MGP_LPJ_T0087491.1 MGP_LPJ_G0033172.1 mouse_genomes_project 7 149204615 149206179 + Syt8 protein_coding retained_intron MGP_LPJ_T0087492.1 MGP_LPJ_G0033172.1 mouse_genomes_project 7 149205209 149206507 + Syt8 protein_coding retained_intron MGP_LPJ_T0081604.1 MGP_LPJ_G0031624.1 mouse_genomes_project 7 14917732 14926455 - MGP_LPJ_P0081604 Calm3 protein_coding protein_coding MGP_LPJ_T0081605.1 MGP_LPJ_G0031624.1 mouse_genomes_project 7 14917754 14919527 - MGP_LPJ_P0081605 Calm3 protein_coding nonsense_mediated_decay MGP_LPJ_T0081606.1 MGP_LPJ_G0031624.1 mouse_genomes_project 7 14918288 14919565 - MGP_LPJ_P0081606 Calm3 protein_coding protein_coding MGP_LPJ_T0081607.1 MGP_LPJ_G0031624.1 mouse_genomes_project 7 14919505 14926170 - Calm3 protein_coding processed_transcript MGP_LPJ_T0005330.1 MGP_LPJ_G0004521.1 mouse_genomes_project 7 138802943 138805206 + Gm16764 antisense antisense MGP_LPJ_T0087624.1 MGP_LPJ_G0033194.1 mouse_genomes_project 7 150468736 150504694 - MGP_LPJ_P0087624 protein_coding protein_coding MGP_LPJ_T0087625.1 MGP_LPJ_G0033194.1 mouse_genomes_project 7 150473322 150504679 - MGP_LPJ_P0087625 protein_coding protein_coding MGP_LPJ_T0085980.1 MGP_LPJ_G0032845.1 mouse_genomes_project 7 125728903 125771477 + Abca15 protein_coding retained_intron MGP_LPJ_T0085981.1 MGP_LPJ_G0032845.1 mouse_genomes_project 7 125728903 125818854 + MGP_LPJ_P0085981 Abca15 protein_coding protein_coding MGP_LPJ_T0085982.1 MGP_LPJ_G0032845.1 mouse_genomes_project 7 125728903 125818854 + MGP_LPJ_P0085982 Abca15 protein_coding protein_coding MGP_LPJ_T0087131.1 MGP_LPJ_G0033076.1 mouse_genomes_project 7 146666246 146669179 - MGP_LPJ_P0087131 Msx3 protein_coding protein_coding MGP_LPJ_T0087132.1 MGP_LPJ_G0033076.1 mouse_genomes_project 7 146666463 146669178 - MGP_LPJ_P0087132 Msx3 protein_coding protein_coding MGP_LPJ_T0083168.1 MGP_LPJ_G0032019.1 mouse_genomes_project 7 42937205 42978201 - MGP_LPJ_P0083168 Zfp141 protein_coding protein_coding MGP_LPJ_T0083169.1 MGP_LPJ_G0032019.1 mouse_genomes_project 7 42951829 42978215 - MGP_LPJ_P0083169 Zfp141 protein_coding protein_coding MGP_LPJ_T0083170.1 MGP_LPJ_G0032019.1 mouse_genomes_project 7 42951846 42978200 - Zfp141 protein_coding retained_intron MGP_LPJ_T0085542.1 MGP_LPJ_G0032719.1 mouse_genomes_project 7 112886465 112887398 + MGP_LPJ_P0085542 Olfr474 protein_coding protein_coding MGP_LPJ_T0015826.1 MGP_LPJ_G0013917.1 mouse_genomes_project 7 104494014 104494317 + processed_pseudogene processed_pseudogene MGP_LPJ_T0083047.1 MGP_LPJ_G0031990.1 mouse_genomes_project 7 35173577 35190770 + MGP_LPJ_P0083047 Slc7a9 protein_coding protein_coding MGP_LPJ_T0083048.1 MGP_LPJ_G0031990.1 mouse_genomes_project 7 35173821 35190770 + MGP_LPJ_P0083048 Slc7a9 protein_coding protein_coding MGP_LPJ_T0083049.1 MGP_LPJ_G0031990.1 mouse_genomes_project 7 35173882 35174855 + Slc7a9 protein_coding retained_intron MGP_LPJ_T0083050.1 MGP_LPJ_G0031990.1 mouse_genomes_project 7 35173884 35190737 + Slc7a9 protein_coding retained_intron MGP_LPJ_T0083051.1 MGP_LPJ_G0031990.1 mouse_genomes_project 7 35173954 35190770 + MGP_LPJ_P0083051 Slc7a9 protein_coding protein_coding MGP_LPJ_T0083052.1 MGP_LPJ_G0031990.1 mouse_genomes_project 7 35174620 35180379 + MGP_LPJ_P0083052 Slc7a9 protein_coding nonsense_mediated_decay MGP_LPJ_T0018290.1 MGP_LPJ_G0015580.1 mouse_genomes_project 7 44460182 44567211 - 2310002F09Rik processed_transcript antisense MGP_LPJ_T0018291.1 MGP_LPJ_G0015580.1 mouse_genomes_project 7 44514150 44517493 - 2310002F09Rik processed_transcript antisense MGP_LPJ_T0018292.1 MGP_LPJ_G0015580.1 mouse_genomes_project 7 44526334 44526939 - 2310002F09Rik processed_transcript TEC MGP_LPJ_T0018293.1 MGP_LPJ_G0015580.1 mouse_genomes_project 7 44566089 44567224 - 2310002F09Rik processed_transcript antisense MGP_LPJ_T0005250.1 MGP_LPJ_G0004464.1 mouse_genomes_project 7 74833609 74836304 + Gm45107 antisense antisense MGP_LPJ_T0083449.1 MGP_LPJ_G0032092.1 mouse_genomes_project 7 45789179 45793724 + MGP_LPJ_P0083449 Fuz protein_coding protein_coding MGP_LPJ_T0083660.1 MGP_LPJ_G0032154.1 mouse_genomes_project 7 46807007 46829308 + MGP_LPJ_P0083660 Lmtk3 protein_coding protein_coding MGP_LPJ_T0083661.1 MGP_LPJ_G0032154.1 mouse_genomes_project 7 46807070 46816240 + MGP_LPJ_P0083661 Lmtk3 protein_coding protein_coding MGP_LPJ_T0083662.1 MGP_LPJ_G0032154.1 mouse_genomes_project 7 46807216 46829273 + MGP_LPJ_P0083662 Lmtk3 protein_coding protein_coding MGP_LPJ_T0083663.1 MGP_LPJ_G0032154.1 mouse_genomes_project 7 46810508 46829308 + MGP_LPJ_P0083663 Lmtk3 protein_coding protein_coding MGP_LPJ_T0083664.1 MGP_LPJ_G0032154.1 mouse_genomes_project 7 46810515 46813077 + MGP_LPJ_P0083664 Lmtk3 protein_coding protein_coding MGP_LPJ_T0083665.1 MGP_LPJ_G0032154.1 mouse_genomes_project 7 46810638 46812887 + Lmtk3 protein_coding retained_intron MGP_LPJ_T0083666.1 MGP_LPJ_G0032154.1 mouse_genomes_project 7 46811685 46817870 + MGP_LPJ_P0083666 Lmtk3 protein_coding nonsense_mediated_decay MGP_LPJ_T0083667.1 MGP_LPJ_G0032154.1 mouse_genomes_project 7 46813032 46817909 + MGP_LPJ_P0083667 Lmtk3 protein_coding nonsense_mediated_decay MGP_LPJ_T0081255.1 MGP_LPJ_G0031492.1 mouse_genomes_project 7 2211400 2212684 - MGP_LPJ_P0081255 Vmn1r55 protein_coding protein_coding MGP_LPJ_T0086482.1 MGP_LPJ_G0032937.1 mouse_genomes_project 7 132880566 132883194 + MGP_LPJ_P0086482 AI467606 protein_coding protein_coding MGP_LPJ_T0086483.1 MGP_LPJ_G0032937.1 mouse_genomes_project 7 132880631 132882201 + MGP_LPJ_P0086483 AI467606 protein_coding protein_coding MGP_LPJ_T0085519.1 MGP_LPJ_G0032703.1 mouse_genomes_project 7 112039440 112040388 + MGP_LPJ_P0085519 Olfr17 protein_coding protein_coding MGP_LPJ_T0015678.1 MGP_LPJ_G0013769.1 mouse_genomes_project 7 15739152 15739619 - processed_pseudogene processed_pseudogene MGP_LPJ_T0085208.1 MGP_LPJ_G0032517.1 mouse_genomes_project 7 106843340 106844470 - MGP_LPJ_P0085208 Olfr543 protein_coding protein_coding MGP_LPJ_T0002297.1 MGP_LPJ_G0002205.1 mouse_genomes_project 7 82409414 82412457 + TEC TEC MGP_LPJ_T0018345.1 MGP_LPJ_G0015596.1 mouse_genomes_project 7 84324545 84333395 + Platr32 processed_transcript processed_transcript MGP_LPJ_T0086921.1 MGP_LPJ_G0033023.1 mouse_genomes_project 7 137675093 137685630 + MGP_LPJ_P0086921 Hmx2 protein_coding protein_coding MGP_LPJ_T0086922.1 MGP_LPJ_G0033023.1 mouse_genomes_project 7 137682108 137685630 + MGP_LPJ_P0086922 Hmx2 protein_coding protein_coding MGP_LPJ_T0081296.1 MGP_LPJ_G0031508.1 mouse_genomes_project 7 3608892 3645050 + MGP_LPJ_P0081296 Gm20715 protein_coding nonsense_mediated_decay MGP_LPJ_T0085229.1 MGP_LPJ_G0032536.1 mouse_genomes_project 7 107176097 107177168 + MGP_LPJ_P0085229 Olfr561 protein_coding protein_coding MGP_LPJ_T0008885.1 MGP_LPJ_G0007177.1 mouse_genomes_project 7 46166704 46184809 + lincRNA lincRNA MGP_LPJ_T0008886.1 MGP_LPJ_G0007177.1 mouse_genomes_project 7 46184770 46198431 + lincRNA lincRNA MGP_LPJ_T0082153.1 MGP_LPJ_G0031786.1 mouse_genomes_project 7 24764174 25029622 + MGP_LPJ_P0082153 protein_coding protein_coding MGP_LPJ_T0082154.1 MGP_LPJ_G0031786.1 mouse_genomes_project 7 24802721 25029245 + MGP_LPJ_P0082154 protein_coding unknown_likely_coding MGP_LPJ_T0085946.1 MGP_LPJ_G0032835.1 mouse_genomes_project 7 125166901 125181881 - protein_coding retained_intron MGP_LPJ_T0085947.1 MGP_LPJ_G0032835.1 mouse_genomes_project 7 125168155 125181888 - MGP_LPJ_P0085947 protein_coding nonsense_mediated_decay MGP_LPJ_T0085948.1 MGP_LPJ_G0032835.1 mouse_genomes_project 7 125168172 125181865 - MGP_LPJ_P0085948 protein_coding nonsense_mediated_decay MGP_LPJ_T0085949.1 MGP_LPJ_G0032835.1 mouse_genomes_project 7 125169224 125181964 - MGP_LPJ_P0085949 protein_coding protein_coding MGP_LPJ_T0082818.1 MGP_LPJ_G0031951.1 mouse_genomes_project 7 30215726 30239805 - MGP_LPJ_P0082818 Cd22 protein_coding protein_coding MGP_LPJ_T0082819.1 MGP_LPJ_G0031951.1 mouse_genomes_project 7 30216151 30240811 - MGP_LPJ_P0082819 Cd22 protein_coding nonsense_mediated_decay MGP_LPJ_T0082820.1 MGP_LPJ_G0031951.1 mouse_genomes_project 7 30216151 30241046 - MGP_LPJ_P0082820 Cd22 protein_coding protein_coding MGP_LPJ_T0082821.1 MGP_LPJ_G0031951.1 mouse_genomes_project 7 30216151 30240842 - MGP_LPJ_P0082821 Cd22 protein_coding protein_coding MGP_LPJ_T0082822.1 MGP_LPJ_G0031951.1 mouse_genomes_project 7 30216153 30239252 - MGP_LPJ_P0082822 Cd22 protein_coding protein_coding MGP_LPJ_T0082823.1 MGP_LPJ_G0031951.1 mouse_genomes_project 7 30216591 30241111 - MGP_LPJ_P0082823 Cd22 protein_coding protein_coding MGP_LPJ_T0082824.1 MGP_LPJ_G0031951.1 mouse_genomes_project 7 30216617 30241056 - MGP_LPJ_P0082824 Cd22 protein_coding nonsense_mediated_decay MGP_LPJ_T0082825.1 MGP_LPJ_G0031951.1 mouse_genomes_project 7 30216859 30240096 - MGP_LPJ_P0082825 Cd22 protein_coding unknown_likely_coding MGP_LPJ_T0082826.1 MGP_LPJ_G0031951.1 mouse_genomes_project 7 30223026 30233427 - MGP_LPJ_P0082826 Cd22 protein_coding nonsense_mediated_decay MGP_LPJ_T0082827.1 MGP_LPJ_G0031951.1 mouse_genomes_project 7 30236074 30240001 - Cd22 protein_coding processed_transcript MGP_LPJ_T0082828.1 MGP_LPJ_G0031951.1 mouse_genomes_project 7 30237453 30241038 - MGP_LPJ_P0082828 Cd22 protein_coding protein_coding MGP_LPJ_T0082829.1 MGP_LPJ_G0031951.1 mouse_genomes_project 7 30237593 30238117 - Cd22 protein_coding retained_intron MGP_LPJ_T0082830.1 MGP_LPJ_G0031951.1 mouse_genomes_project 7 30237633 30241055 - Cd22 protein_coding processed_transcript MGP_LPJ_T0082831.1 MGP_LPJ_G0031951.1 mouse_genomes_project 7 30237672 30241055 - Cd22 protein_coding processed_transcript MGP_LPJ_T0082832.1 MGP_LPJ_G0031951.1 mouse_genomes_project 7 30237748 30241045 - MGP_LPJ_P0082832 Cd22 protein_coding protein_coding MGP_LPJ_T0082833.1 MGP_LPJ_G0031951.1 mouse_genomes_project 7 30239969 30241119 - Cd22 protein_coding processed_transcript MGP_LPJ_T0009007.1 MGP_LPJ_G0007259.1 mouse_genomes_project 7 120135150 120171139 + A730082K24Rik lincRNA lincRNA MGP_LPJ_T0009008.1 MGP_LPJ_G0007259.1 mouse_genomes_project 7 120135188 120144524 + A730082K24Rik lincRNA lincRNA MGP_LPJ_T0009009.1 MGP_LPJ_G0007259.1 mouse_genomes_project 7 120137635 120161690 + A730082K24Rik lincRNA lincRNA MGP_LPJ_T0009010.1 MGP_LPJ_G0007259.1 mouse_genomes_project 7 120137650 120161660 + A730082K24Rik lincRNA lincRNA MGP_LPJ_T0009011.1 MGP_LPJ_G0007259.1 mouse_genomes_project 7 120137668 120170044 + A730082K24Rik lincRNA lincRNA MGP_LPJ_T0086894.1 MGP_LPJ_G0033014.1 mouse_genomes_project 7 137281123 137362799 + MGP_LPJ_P0086894 5430419D17Rik protein_coding protein_coding MGP_LPJ_T0086895.1 MGP_LPJ_G0033014.1 mouse_genomes_project 7 137318715 137343976 + 5430419D17Rik protein_coding retained_intron MGP_LPJ_T0081688.1 MGP_LPJ_G0031660.1 mouse_genomes_project 7 17380102 17390074 + MGP_LPJ_P0081688 Dmpk protein_coding protein_coding MGP_LPJ_T0081689.1 MGP_LPJ_G0031660.1 mouse_genomes_project 7 17380121 17383216 + MGP_LPJ_P0081689 Dmpk protein_coding protein_coding MGP_LPJ_T0081690.1 MGP_LPJ_G0031660.1 mouse_genomes_project 7 17380123 17390074 + MGP_LPJ_P0081690 Dmpk protein_coding nonsense_mediated_decay MGP_LPJ_T0081691.1 MGP_LPJ_G0031660.1 mouse_genomes_project 7 17380138 17390074 + MGP_LPJ_P0081691 Dmpk protein_coding protein_coding MGP_LPJ_T0081692.1 MGP_LPJ_G0031660.1 mouse_genomes_project 7 17380194 17390074 + MGP_LPJ_P0081692 Dmpk protein_coding protein_coding MGP_LPJ_T0081693.1 MGP_LPJ_G0031660.1 mouse_genomes_project 7 17380963 17383951 + Dmpk protein_coding processed_transcript MGP_LPJ_T0081694.1 MGP_LPJ_G0031660.1 mouse_genomes_project 7 17382753 17390072 + Dmpk protein_coding retained_intron MGP_LPJ_T0081695.1 MGP_LPJ_G0031660.1 mouse_genomes_project 7 17382753 17390072 + Dmpk protein_coding retained_intron MGP_LPJ_T0081696.1 MGP_LPJ_G0031660.1 mouse_genomes_project 7 17382753 17390072 + Dmpk protein_coding processed_transcript MGP_LPJ_T0081697.1 MGP_LPJ_G0031660.1 mouse_genomes_project 7 17383518 17385382 + Dmpk protein_coding processed_transcript MGP_LPJ_T0081698.1 MGP_LPJ_G0031660.1 mouse_genomes_project 7 17383742 17384881 + Dmpk protein_coding processed_transcript MGP_LPJ_T0081699.1 MGP_LPJ_G0031660.1 mouse_genomes_project 7 17383860 17388028 + Dmpk protein_coding processed_transcript MGP_LPJ_T0081700.1 MGP_LPJ_G0031660.1 mouse_genomes_project 7 17383995 17385608 + Dmpk protein_coding retained_intron MGP_LPJ_T0081701.1 MGP_LPJ_G0031660.1 mouse_genomes_project 7 17384434 17389305 + Dmpk protein_coding processed_transcript MGP_LPJ_T0081702.1 MGP_LPJ_G0031660.1 mouse_genomes_project 7 17387744 17388622 + Dmpk protein_coding retained_intron MGP_LPJ_T0081703.1 MGP_LPJ_G0031660.1 mouse_genomes_project 7 17387877 17388796 + Dmpk protein_coding processed_transcript MGP_LPJ_T0081704.1 MGP_LPJ_G0031660.1 mouse_genomes_project 7 17388478 17390024 + Dmpk protein_coding processed_transcript MGP_LPJ_T0081705.1 MGP_LPJ_G0031660.1 mouse_genomes_project 7 17388556 17389459 + Dmpk protein_coding retained_intron MGP_LPJ_T0008963.1 MGP_LPJ_G0007233.1 mouse_genomes_project 7 84821214 84827251 + 2900076A07Rik lincRNA lincRNA MGP_LPJ_T0008964.1 MGP_LPJ_G0007233.1 mouse_genomes_project 7 84821227 84827843 + 2900076A07Rik lincRNA lincRNA MGP_LPJ_T0008965.1 MGP_LPJ_G0007233.1 mouse_genomes_project 7 84821235 84827135 + 2900076A07Rik lincRNA lincRNA MGP_LPJ_T0008966.1 MGP_LPJ_G0007233.1 mouse_genomes_project 7 84821235 84829185 + 2900076A07Rik lincRNA lincRNA MGP_LPJ_T0008967.1 MGP_LPJ_G0007233.1 mouse_genomes_project 7 84821270 84826937 + 2900076A07Rik lincRNA lincRNA MGP_LPJ_T0008968.1 MGP_LPJ_G0007233.1 mouse_genomes_project 7 84826095 84827208 + 2900076A07Rik lincRNA lincRNA MGP_LPJ_T0008969.1 MGP_LPJ_G0007233.1 mouse_genomes_project 7 84826472 84827287 + 2900076A07Rik lincRNA lincRNA MGP_LPJ_T0008970.1 MGP_LPJ_G0007233.1 mouse_genomes_project 7 84826487 84829189 + 2900076A07Rik lincRNA lincRNA MGP_LPJ_T0015698.1 MGP_LPJ_G0013789.1 mouse_genomes_project 7 24681184 24681555 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008881.1 MGP_LPJ_G0007173.1 mouse_genomes_project 7 44432786 44433260 - Gm44819 lincRNA lincRNA MGP_LPJ_T0083725.1 MGP_LPJ_G0032172.1 mouse_genomes_project 7 47510133 47716455 - MGP_LPJ_P0083725 Sergef protein_coding protein_coding MGP_LPJ_T0083726.1 MGP_LPJ_G0032172.1 mouse_genomes_project 7 47510186 47675288 - Sergef protein_coding processed_transcript MGP_LPJ_T0083727.1 MGP_LPJ_G0032172.1 mouse_genomes_project 7 47510439 47686837 - Sergef protein_coding processed_transcript MGP_LPJ_T0083728.1 MGP_LPJ_G0032172.1 mouse_genomes_project 7 47707665 47710953 - Sergef protein_coding retained_intron MGP_LPJ_T0083729.1 MGP_LPJ_G0032172.1 mouse_genomes_project 7 47707687 47716279 - MGP_LPJ_P0083729 Sergef protein_coding protein_coding MGP_LPJ_T0083730.1 MGP_LPJ_G0032172.1 mouse_genomes_project 7 47707701 47716228 - Sergef protein_coding processed_transcript MGP_LPJ_T0084940.1 MGP_LPJ_G0032466.1 mouse_genomes_project 7 104030048 104052250 - MGP_LPJ_P0084940 Spcs2 protein_coding protein_coding MGP_LPJ_T0084956.1 MGP_LPJ_G0032472.1 mouse_genomes_project 7 104398770 104406971 + MGP_LPJ_P0084956 Kcne3 protein_coding protein_coding MGP_LPJ_T0084957.1 MGP_LPJ_G0032472.1 mouse_genomes_project 7 104400810 104406971 + MGP_LPJ_P0084957 Kcne3 protein_coding protein_coding MGP_LPJ_T0084958.1 MGP_LPJ_G0032472.1 mouse_genomes_project 7 104400810 104406971 + MGP_LPJ_P0084958 Kcne3 protein_coding protein_coding MGP_LPJ_T0084959.1 MGP_LPJ_G0032472.1 mouse_genomes_project 7 104400810 104406971 + MGP_LPJ_P0084959 Kcne3 protein_coding protein_coding MGP_LPJ_T0002314.1 MGP_LPJ_G0002222.1 mouse_genomes_project 7 121634857 121635810 - TEC TEC MGP_LPJ_T0082643.1 MGP_LPJ_G0031914.1 mouse_genomes_project 7 29614658 29620276 + MGP_LPJ_P0082643 Alkbh6 protein_coding protein_coding MGP_LPJ_T0082644.1 MGP_LPJ_G0031914.1 mouse_genomes_project 7 29614718 29620126 + MGP_LPJ_P0082644 Alkbh6 protein_coding protein_coding MGP_LPJ_T0082645.1 MGP_LPJ_G0031914.1 mouse_genomes_project 7 29614718 29620133 + MGP_LPJ_P0082645 Alkbh6 protein_coding nonsense_mediated_decay MGP_LPJ_T0082646.1 MGP_LPJ_G0031914.1 mouse_genomes_project 7 29614729 29620275 + Alkbh6 protein_coding retained_intron MGP_LPJ_T0082647.1 MGP_LPJ_G0031914.1 mouse_genomes_project 7 29614736 29618467 + Alkbh6 protein_coding retained_intron MGP_LPJ_T0082648.1 MGP_LPJ_G0031914.1 mouse_genomes_project 7 29614750 29618379 + Alkbh6 protein_coding retained_intron MGP_LPJ_T0082649.1 MGP_LPJ_G0031914.1 mouse_genomes_project 7 29614754 29617001 + Alkbh6 protein_coding processed_transcript MGP_LPJ_T0082650.1 MGP_LPJ_G0031914.1 mouse_genomes_project 7 29614795 29618655 + Alkbh6 protein_coding retained_intron MGP_LPJ_T0082651.1 MGP_LPJ_G0031914.1 mouse_genomes_project 7 29615719 29618620 + Alkbh6 protein_coding retained_intron MGP_LPJ_T0082652.1 MGP_LPJ_G0031914.1 mouse_genomes_project 7 29617091 29618322 + Alkbh6 protein_coding retained_intron MGP_LPJ_T0082653.1 MGP_LPJ_G0031914.1 mouse_genomes_project 7 29618633 29620276 + Alkbh6 protein_coding processed_transcript MGP_LPJ_T0015850.1 MGP_LPJ_G0013941.1 mouse_genomes_project 7 122065936 122066811 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102346.1 MGP_LPJ_G0040382.1 mouse_genomes_project 7 32968574 32969830 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0085361.1 MGP_LPJ_G0032633.1 mouse_genomes_project 7 109052677 109053604 - MGP_LPJ_P0085361 Olfr655 protein_coding protein_coding MGP_LPJ_T0005283.1 MGP_LPJ_G0004487.1 mouse_genomes_project 7 100816484 100821549 - Gm15416 antisense antisense MGP_LPJ_T0085030.1 MGP_LPJ_G0032487.1 mouse_genomes_project 7 105200505 105228505 - MGP_LPJ_P0085030 P2ry6 protein_coding protein_coding MGP_LPJ_T0085262.1 MGP_LPJ_G0032566.1 mouse_genomes_project 7 107907215 107908175 + MGP_LPJ_P0085262 Olfr606 protein_coding protein_coding MGP_LPJ_T0081543.1 MGP_LPJ_G0031608.1 mouse_genomes_project 7 14261657 14272102 + MGP_LPJ_P0081543 Bbc3 protein_coding protein_coding MGP_LPJ_T0081544.1 MGP_LPJ_G0031608.1 mouse_genomes_project 7 14264016 14267459 + MGP_LPJ_P0081544 Bbc3 protein_coding protein_coding MGP_LPJ_T0081545.1 MGP_LPJ_G0031608.1 mouse_genomes_project 7 14267237 14271595 + Bbc3 protein_coding processed_transcript MGP_LPJ_T0081872.1 MGP_LPJ_G0031718.1 mouse_genomes_project 7 22707357 22737374 + MGP_LPJ_P0081872 Zfp180 protein_coding protein_coding MGP_LPJ_T0081873.1 MGP_LPJ_G0031718.1 mouse_genomes_project 7 22707357 22737389 + MGP_LPJ_P0081873 Zfp180 protein_coding protein_coding MGP_LPJ_T0081874.1 MGP_LPJ_G0031718.1 mouse_genomes_project 7 22707380 22732260 + MGP_LPJ_P0081874 Zfp180 protein_coding nonsense_mediated_decay MGP_LPJ_T0081875.1 MGP_LPJ_G0031718.1 mouse_genomes_project 7 22707502 22737368 + MGP_LPJ_P0081875 Zfp180 protein_coding protein_coding MGP_LPJ_T0081876.1 MGP_LPJ_G0031718.1 mouse_genomes_project 7 22724439 22729162 + Zfp180 protein_coding retained_intron MGP_LPJ_T0081455.1 MGP_LPJ_G0031578.1 mouse_genomes_project 7 11429939 11536944 - MGP_LPJ_P0081455 Sult2a4 protein_coding protein_coding MGP_LPJ_T0086022.1 MGP_LPJ_G0032856.1 mouse_genomes_project 7 126494829 126537281 + MGP_LPJ_P0086022 Mettl9 protein_coding protein_coding MGP_LPJ_T0008942.1 MGP_LPJ_G0007221.1 mouse_genomes_project 7 77699388 77736409 - 0610006L08Rik lincRNA lincRNA MGP_LPJ_T0008943.1 MGP_LPJ_G0007221.1 mouse_genomes_project 7 77704195 77736406 - 0610006L08Rik lincRNA lincRNA MGP_LPJ_T0081140.1 MGP_LPJ_G0031454.1 mouse_genomes_project 7 1534548 1543815 - MGP_LPJ_P0081140 Dnaaf3 protein_coding protein_coding MGP_LPJ_T0002316.1 MGP_LPJ_G0002224.1 mouse_genomes_project 7 124872582 124875185 + TEC TEC MGP_LPJ_T0085759.1 MGP_LPJ_G0032798.1 mouse_genomes_project 7 119453033 119467088 - MGP_LPJ_P0085759 Psma1 protein_coding protein_coding MGP_LPJ_T0085760.1 MGP_LPJ_G0032798.1 mouse_genomes_project 7 119453222 119466996 - Psma1 protein_coding processed_transcript MGP_LPJ_T0085761.1 MGP_LPJ_G0032798.1 mouse_genomes_project 7 119458916 119467024 - Psma1 protein_coding retained_intron MGP_LPJ_T0085762.1 MGP_LPJ_G0032798.1 mouse_genomes_project 7 119464778 119467013 - Psma1 protein_coding retained_intron MGP_LPJ_T0087257.1 MGP_LPJ_G0033126.1 mouse_genomes_project 7 147746639 147756010 - MGP_LPJ_P0087257 Sigirr protein_coding protein_coding MGP_LPJ_T0087091.1 MGP_LPJ_G0033066.1 mouse_genomes_project 7 145959930 146159718 + MGP_LPJ_P0087091 Inpp5a protein_coding protein_coding MGP_LPJ_T0087092.1 MGP_LPJ_G0033066.1 mouse_genomes_project 7 145959931 146159718 + MGP_LPJ_P0087092 Inpp5a protein_coding protein_coding MGP_LPJ_T0087093.1 MGP_LPJ_G0033066.1 mouse_genomes_project 7 145971359 146159291 + MGP_LPJ_P0087093 Inpp5a protein_coding protein_coding MGP_LPJ_T0087094.1 MGP_LPJ_G0033066.1 mouse_genomes_project 7 146024708 146084830 + Inpp5a protein_coding processed_transcript MGP_LPJ_T0087095.1 MGP_LPJ_G0033066.1 mouse_genomes_project 7 146052212 146070010 + Inpp5a protein_coding processed_transcript MGP_LPJ_T0087096.1 MGP_LPJ_G0033066.1 mouse_genomes_project 7 146097869 146155275 + Inpp5a protein_coding processed_transcript MGP_LPJ_T0005316.1 MGP_LPJ_G0004509.1 mouse_genomes_project 7 132401496 132402548 - 2510046G10Rik antisense antisense MGP_LPJ_T0005317.1 MGP_LPJ_G0004509.1 mouse_genomes_project 7 132402176 132402524 - 2510046G10Rik antisense antisense MGP_LPJ_T0102392.1 MGP_LPJ_G0040428.1 mouse_genomes_project 7 48882089 49458442 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0009028.1 MGP_LPJ_G0007271.1 mouse_genomes_project 7 131036905 131039058 + 4930571K23Rik lincRNA lincRNA MGP_LPJ_T0009029.1 MGP_LPJ_G0007271.1 mouse_genomes_project 7 131037056 131039052 + 4930571K23Rik lincRNA lincRNA MGP_LPJ_T0081086.1 MGP_LPJ_G0031447.1 mouse_genomes_project 7 1345547 1356673 + MGP_LPJ_P0081086 Ncr1 protein_coding protein_coding MGP_LPJ_T0081087.1 MGP_LPJ_G0031447.1 mouse_genomes_project 7 1345592 1356673 + MGP_LPJ_P0081087 Ncr1 protein_coding protein_coding MGP_LPJ_T0084207.1 MGP_LPJ_G0032283.1 mouse_genomes_project 7 81228687 81645651 - MGP_LPJ_P0084207 Ntrk3 protein_coding protein_coding MGP_LPJ_T0084208.1 MGP_LPJ_G0032283.1 mouse_genomes_project 7 81234070 81245918 - MGP_LPJ_P0084208 Ntrk3 protein_coding nonsense_mediated_decay MGP_LPJ_T0084209.1 MGP_LPJ_G0032283.1 mouse_genomes_project 7 81245554 81645026 - MGP_LPJ_P0084209 Ntrk3 protein_coding protein_coding MGP_LPJ_T0084210.1 MGP_LPJ_G0032283.1 mouse_genomes_project 7 81245581 81645032 - MGP_LPJ_P0084210 Ntrk3 protein_coding protein_coding MGP_LPJ_T0084211.1 MGP_LPJ_G0032283.1 mouse_genomes_project 7 81305139 81319845 - MGP_LPJ_P0084211 Ntrk3 protein_coding nonsense_mediated_decay MGP_LPJ_T0084212.1 MGP_LPJ_G0032283.1 mouse_genomes_project 7 81356490 81645225 - MGP_LPJ_P0084212 Ntrk3 protein_coding protein_coding MGP_LPJ_T0084213.1 MGP_LPJ_G0032283.1 mouse_genomes_project 7 81358123 81433752 - Ntrk3 protein_coding processed_transcript MGP_LPJ_T0084214.1 MGP_LPJ_G0032283.1 mouse_genomes_project 7 81358431 81412050 - MGP_LPJ_P0084214 Ntrk3 protein_coding nonsense_mediated_decay MGP_LPJ_T0084215.1 MGP_LPJ_G0032283.1 mouse_genomes_project 7 81412011 81509996 - Ntrk3 protein_coding processed_transcript MGP_LPJ_T0084216.1 MGP_LPJ_G0032283.1 mouse_genomes_project 7 81507498 81645218 - Ntrk3 protein_coding retained_intron MGP_LPJ_T0084217.1 MGP_LPJ_G0032283.1 mouse_genomes_project 7 81536219 81639133 - Ntrk3 protein_coding processed_transcript MGP_LPJ_T0084218.1 MGP_LPJ_G0032283.1 mouse_genomes_project 7 81581888 81691946 - Ntrk3 protein_coding processed_transcript MGP_LPJ_T0084219.1 MGP_LPJ_G0032283.1 mouse_genomes_project 7 81582622 81645646 - MGP_LPJ_P0084219 Ntrk3 protein_coding protein_coding MGP_LPJ_T0084220.1 MGP_LPJ_G0032283.1 mouse_genomes_project 7 81644778 81731037 - MGP_LPJ_P0084220 Ntrk3 protein_coding protein_coding MGP_LPJ_T0084221.1 MGP_LPJ_G0032283.1 mouse_genomes_project 7 81645048 81646800 - Ntrk3 protein_coding processed_transcript MGP_LPJ_T0084222.1 MGP_LPJ_G0032283.1 mouse_genomes_project 7 81649167 81794988 - Ntrk3 protein_coding processed_transcript MGP_LPJ_T0084223.1 MGP_LPJ_G0032283.1 mouse_genomes_project 7 81655478 81815805 - Ntrk3 protein_coding processed_transcript MGP_LPJ_T0084224.1 MGP_LPJ_G0032283.1 mouse_genomes_project 7 81662549 81731422 - Ntrk3 protein_coding processed_transcript MGP_LPJ_T0084225.1 MGP_LPJ_G0032283.1 mouse_genomes_project 7 81803475 81815807 - Ntrk3 protein_coding processed_transcript MGP_LPJ_T0084226.1 MGP_LPJ_G0032283.1 mouse_genomes_project 7 81807257 81815807 - Ntrk3 protein_coding processed_transcript MGP_LPJ_T0081667.1 MGP_LPJ_G0031653.1 mouse_genomes_project 7 17272125 17273688 + MGP_LPJ_P0081667 Nanos2 protein_coding protein_coding MGP_LPJ_T0083518.1 MGP_LPJ_G0032119.1 mouse_genomes_project 7 46223639 46235105 + MGP_LPJ_P0083518 protein_coding protein_coding MGP_LPJ_T0083519.1 MGP_LPJ_G0032119.1 mouse_genomes_project 7 46228615 46231374 + protein_coding processed_transcript MGP_LPJ_T0083520.1 MGP_LPJ_G0032119.1 mouse_genomes_project 7 46228852 46232769 + protein_coding retained_intron MGP_LPJ_T0083521.1 MGP_LPJ_G0032119.1 mouse_genomes_project 7 46228888 46234692 + MGP_LPJ_P0083521 protein_coding protein_coding MGP_LPJ_T0083522.1 MGP_LPJ_G0032119.1 mouse_genomes_project 7 46228985 46235104 + MGP_LPJ_P0083522 protein_coding protein_coding MGP_LPJ_T0083523.1 MGP_LPJ_G0032119.1 mouse_genomes_project 7 46233246 46235109 + protein_coding retained_intron MGP_LPJ_T0010931.1 MGP_LPJ_G0009049.1 mouse_genomes_project 7 105144684 105144788 - Mir3102 miRNA miRNA MGP_LPJ_T0086933.1 MGP_LPJ_G0033028.1 mouse_genomes_project 7 138754071 138774808 - MGP_LPJ_P0086933 Oat protein_coding protein_coding MGP_LPJ_T0081357.1 MGP_LPJ_G0031550.1 mouse_genomes_project 7 10018605 10044445 - MGP_LPJ_P0081357 protein_coding protein_coding MGP_LPJ_T0086924.1 MGP_LPJ_G0033025.1 mouse_genomes_project 7 138127045 138157475 + MGP_LPJ_P0086924 Gpr26 protein_coding protein_coding MGP_LPJ_T0015869.1 MGP_LPJ_G0013960.1 mouse_genomes_project 7 133087838 133088183 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018375.1 MGP_LPJ_G0015613.1 mouse_genomes_project 7 134365959 134379439 + Gm45019 processed_transcript lincRNA MGP_LPJ_T0018376.1 MGP_LPJ_G0015613.1 mouse_genomes_project 7 134378091 134379438 + Gm45019 processed_transcript retained_intron MGP_LPJ_T0085564.1 MGP_LPJ_G0032741.1 mouse_genomes_project 7 113565645 113566653 + MGP_LPJ_P0085564 Olfr506 protein_coding protein_coding MGP_LPJ_T0084587.1 MGP_LPJ_G0032355.1 mouse_genomes_project 7 87036119 87046470 + MGP_LPJ_P0084587 Stard5 protein_coding protein_coding MGP_LPJ_T0084588.1 MGP_LPJ_G0032355.1 mouse_genomes_project 7 87036160 87037626 + Stard5 protein_coding retained_intron MGP_LPJ_T0084589.1 MGP_LPJ_G0032355.1 mouse_genomes_project 7 87036160 87057268 + MGP_LPJ_P0084589 Stard5 protein_coding protein_coding MGP_LPJ_T0084590.1 MGP_LPJ_G0032355.1 mouse_genomes_project 7 87036176 87042229 + Stard5 protein_coding retained_intron MGP_LPJ_T0084591.1 MGP_LPJ_G0032355.1 mouse_genomes_project 7 87036707 87037510 + Stard5 protein_coding processed_transcript MGP_LPJ_T0101001.1 MGP_LPJ_G0039264.1 mouse_genomes_project 7 141499781 141499914 - Gm24581 snoRNA snoRNA MGP_LPJ_T0008880.1 MGP_LPJ_G0007172.1 mouse_genomes_project 7 44314064 44314422 + Gm44818 lincRNA lincRNA MGP_LPJ_T0082124.1 MGP_LPJ_G0031780.1 mouse_genomes_project 7 24496516 24504503 - MGP_LPJ_P0082124 Ccdc97 protein_coding protein_coding MGP_LPJ_T0082125.1 MGP_LPJ_G0031780.1 mouse_genomes_project 7 24498345 24501517 - Ccdc97 protein_coding processed_transcript MGP_LPJ_T0082126.1 MGP_LPJ_G0031780.1 mouse_genomes_project 7 24499544 24504418 - Ccdc97 protein_coding retained_intron MGP_LPJ_T0082127.1 MGP_LPJ_G0031780.1 mouse_genomes_project 7 24500232 24504460 - MGP_LPJ_P0082127 Ccdc97 protein_coding protein_coding MGP_LPJ_T0082128.1 MGP_LPJ_G0031780.1 mouse_genomes_project 7 24500320 24501805 - Ccdc97 protein_coding retained_intron MGP_LPJ_T0082129.1 MGP_LPJ_G0031780.1 mouse_genomes_project 7 24501314 24504406 - Ccdc97 protein_coding processed_transcript MGP_LPJ_T0082130.1 MGP_LPJ_G0031780.1 mouse_genomes_project 7 24501314 24504421 - Ccdc97 protein_coding processed_transcript MGP_LPJ_T0082131.1 MGP_LPJ_G0031780.1 mouse_genomes_project 7 24501551 24504470 - Ccdc97 protein_coding processed_transcript MGP_LPJ_T0082132.1 MGP_LPJ_G0031780.1 mouse_genomes_project 7 24502316 24504482 - Ccdc97 protein_coding processed_transcript MGP_LPJ_T0085809.1 MGP_LPJ_G0032806.1 mouse_genomes_project 7 121334974 121456779 - MGP_LPJ_P0085809 Plekha7 protein_coding protein_coding MGP_LPJ_T0085810.1 MGP_LPJ_G0032806.1 mouse_genomes_project 7 121334982 121535589 - MGP_LPJ_P0085810 Plekha7 protein_coding protein_coding MGP_LPJ_T0085811.1 MGP_LPJ_G0032806.1 mouse_genomes_project 7 121335015 121344166 - MGP_LPJ_P0085811 Plekha7 protein_coding unknown_likely_coding MGP_LPJ_T0085812.1 MGP_LPJ_G0032806.1 mouse_genomes_project 7 121337523 121402252 - MGP_LPJ_P0085812 Plekha7 protein_coding protein_coding MGP_LPJ_T0085813.1 MGP_LPJ_G0032806.1 mouse_genomes_project 7 121345251 121412882 - MGP_LPJ_P0085813 Plekha7 protein_coding protein_coding MGP_LPJ_T0085814.1 MGP_LPJ_G0032806.1 mouse_genomes_project 7 121345255 121402530 - MGP_LPJ_P0085814 Plekha7 protein_coding protein_coding MGP_LPJ_T0085815.1 MGP_LPJ_G0032806.1 mouse_genomes_project 7 121346394 121535567 - MGP_LPJ_P0085815 Plekha7 protein_coding protein_coding MGP_LPJ_T0085816.1 MGP_LPJ_G0032806.1 mouse_genomes_project 7 121346491 121456498 - MGP_LPJ_P0085816 Plekha7 protein_coding protein_coding MGP_LPJ_T0085817.1 MGP_LPJ_G0032806.1 mouse_genomes_project 7 121354191 121369358 - MGP_LPJ_P0085817 Plekha7 protein_coding protein_coding MGP_LPJ_T0085818.1 MGP_LPJ_G0032806.1 mouse_genomes_project 7 121367534 121456633 - Plekha7 protein_coding retained_intron MGP_LPJ_T0085819.1 MGP_LPJ_G0032806.1 mouse_genomes_project 7 121374669 121375613 - Plekha7 protein_coding retained_intron MGP_LPJ_T0085820.1 MGP_LPJ_G0032806.1 mouse_genomes_project 7 121375989 121397442 - Plekha7 protein_coding processed_transcript MGP_LPJ_T0085821.1 MGP_LPJ_G0032806.1 mouse_genomes_project 7 121383730 121485605 - MGP_LPJ_P0085821 Plekha7 protein_coding nonsense_mediated_decay MGP_LPJ_T0085822.1 MGP_LPJ_G0032806.1 mouse_genomes_project 7 121383853 121399931 - Plekha7 protein_coding processed_transcript MGP_LPJ_T0085823.1 MGP_LPJ_G0032806.1 mouse_genomes_project 7 121388655 121535453 - MGP_LPJ_P0085823 Plekha7 protein_coding protein_coding MGP_LPJ_T0085824.1 MGP_LPJ_G0032806.1 mouse_genomes_project 7 121389830 121535262 - Plekha7 protein_coding retained_intron MGP_LPJ_T0085825.1 MGP_LPJ_G0032806.1 mouse_genomes_project 7 121389876 121393638 - Plekha7 protein_coding retained_intron MGP_LPJ_T0085826.1 MGP_LPJ_G0032806.1 mouse_genomes_project 7 121394205 121491623 - Plekha7 protein_coding processed_transcript MGP_LPJ_T0081466.1 MGP_LPJ_G0031586.1 mouse_genomes_project 7 12069300 12099231 - MGP_LPJ_P0081466 Sult2a7 protein_coding protein_coding MGP_LPJ_T0081467.1 MGP_LPJ_G0031586.1 mouse_genomes_project 7 12069377 12098231 - MGP_LPJ_P0081467 Sult2a7 protein_coding unknown_likely_coding MGP_LPJ_T0085558.1 MGP_LPJ_G0032735.1 mouse_genomes_project 7 113353089 113354082 + MGP_LPJ_P0085558 protein_coding protein_coding MGP_LPJ_T0015653.1 MGP_LPJ_G0013744.1 mouse_genomes_project 7 3137472 3137919 + processed_pseudogene processed_pseudogene MGP_LPJ_T0084747.1 MGP_LPJ_G0032421.1 mouse_genomes_project 7 96444222 96471624 - MGP_LPJ_P0084747 Pcf11 protein_coding protein_coding MGP_LPJ_T0084748.1 MGP_LPJ_G0032421.1 mouse_genomes_project 7 96444769 96465234 - MGP_LPJ_P0084748 Pcf11 protein_coding protein_coding MGP_LPJ_T0084749.1 MGP_LPJ_G0032421.1 mouse_genomes_project 7 96447326 96448709 - Pcf11 protein_coding retained_intron MGP_LPJ_T0102466.1 MGP_LPJ_G0040502.1 mouse_genomes_project 7 134231624 134231818 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0087432.1 MGP_LPJ_G0033156.1 mouse_genomes_project 7 148390206 148398649 + MGP_LPJ_P0087432 Muc2 protein_coding protein_coding MGP_LPJ_T0087433.1 MGP_LPJ_G0033156.1 mouse_genomes_project 7 148390235 148421664 + MGP_LPJ_P0087433 Muc2 protein_coding unknown_likely_coding MGP_LPJ_T0087434.1 MGP_LPJ_G0033156.1 mouse_genomes_project 7 148395569 148397114 + MGP_LPJ_P0087434 Muc2 protein_coding protein_coding MGP_LPJ_T0087435.1 MGP_LPJ_G0033156.1 mouse_genomes_project 7 148399368 148401667 + MGP_LPJ_P0087435 Muc2 protein_coding protein_coding MGP_LPJ_T0087436.1 MGP_LPJ_G0033156.1 mouse_genomes_project 7 148402259 148402938 + MGP_LPJ_P0087436 Muc2 protein_coding protein_coding MGP_LPJ_T0087437.1 MGP_LPJ_G0033156.1 mouse_genomes_project 7 148404327 148404774 + MGP_LPJ_P0087437 Muc2 protein_coding protein_coding MGP_LPJ_T0087438.1 MGP_LPJ_G0033156.1 mouse_genomes_project 7 148410674 148421820 + MGP_LPJ_P0087438 Muc2 protein_coding protein_coding MGP_LPJ_T0087439.1 MGP_LPJ_G0033156.1 mouse_genomes_project 7 148412894 148421817 + MGP_LPJ_P0087439 Muc2 protein_coding protein_coding MGP_LPJ_T0085343.1 MGP_LPJ_G0032625.1 mouse_genomes_project 7 108835475 108852069 - protein_coding retained_intron MGP_LPJ_T0085344.1 MGP_LPJ_G0032625.1 mouse_genomes_project 7 108835491 108838569 - MGP_LPJ_P0085344 protein_coding protein_coding MGP_LPJ_T0085345.1 MGP_LPJ_G0032625.1 mouse_genomes_project 7 108836766 108848402 - MGP_LPJ_P0085345 protein_coding protein_coding MGP_LPJ_T0085346.1 MGP_LPJ_G0032625.1 mouse_genomes_project 7 108837472 108838566 - protein_coding retained_intron MGP_LPJ_T0085347.1 MGP_LPJ_G0032625.1 mouse_genomes_project 7 108841316 108851967 - MGP_LPJ_P0085347 protein_coding protein_coding MGP_LPJ_T0086115.1 MGP_LPJ_G0032877.1 mouse_genomes_project 7 128785149 128839417 + MGP_LPJ_P0086115 Slc5a11 protein_coding protein_coding MGP_LPJ_T0086116.1 MGP_LPJ_G0032877.1 mouse_genomes_project 7 128785180 128800655 + Slc5a11 protein_coding processed_transcript MGP_LPJ_T0086117.1 MGP_LPJ_G0032877.1 mouse_genomes_project 7 128785182 128846700 + MGP_LPJ_P0086117 Slc5a11 protein_coding protein_coding MGP_LPJ_T0086118.1 MGP_LPJ_G0032877.1 mouse_genomes_project 7 128800554 128812132 + MGP_LPJ_P0086118 Slc5a11 protein_coding protein_coding MGP_LPJ_T0086119.1 MGP_LPJ_G0032877.1 mouse_genomes_project 7 128800554 128820717 + MGP_LPJ_P0086119 Slc5a11 protein_coding protein_coding MGP_LPJ_T0086120.1 MGP_LPJ_G0032877.1 mouse_genomes_project 7 128808327 128846650 + MGP_LPJ_P0086120 Slc5a11 protein_coding protein_coding MGP_LPJ_T0086121.1 MGP_LPJ_G0032877.1 mouse_genomes_project 7 128813028 128823850 + MGP_LPJ_P0086121 Slc5a11 protein_coding protein_coding MGP_LPJ_T0086122.1 MGP_LPJ_G0032877.1 mouse_genomes_project 7 128838925 128841538 + Slc5a11 protein_coding processed_transcript MGP_LPJ_T0087033.1 MGP_LPJ_G0033047.1 mouse_genomes_project 7 141647117 141651421 + MGP_LPJ_P0087033 Nps protein_coding protein_coding MGP_LPJ_T0081327.1 MGP_LPJ_G0031530.1 mouse_genomes_project 7 7898824 7900556 - MGP_LPJ_P0081327 Vmn1r69 protein_coding protein_coding MGP_LPJ_T0081328.1 MGP_LPJ_G0031530.1 mouse_genomes_project 7 7899757 7935533 - MGP_LPJ_P0081328 Vmn1r69 protein_coding protein_coding MGP_LPJ_T0081329.1 MGP_LPJ_G0031530.1 mouse_genomes_project 7 7899757 7935533 - MGP_LPJ_P0081329 Vmn1r69 protein_coding protein_coding MGP_LPJ_T0081026.1 MGP_LPJ_G0031436.1 mouse_genomes_project 7 661675 665393 - MGP_LPJ_P0081026 protein_coding unknown_likely_coding MGP_LPJ_T0081027.1 MGP_LPJ_G0031436.1 mouse_genomes_project 7 661683 900843 - protein_coding retained_intron MGP_LPJ_T0081028.1 MGP_LPJ_G0031436.1 mouse_genomes_project 7 661683 900823 - protein_coding retained_intron MGP_LPJ_T0081029.1 MGP_LPJ_G0031436.1 mouse_genomes_project 7 663402 900817 - protein_coding retained_intron MGP_LPJ_T0083872.1 MGP_LPJ_G0032217.1 mouse_genomes_project 7 56667684 57090239 + Luzp2 protein_coding retained_intron MGP_LPJ_T0083873.1 MGP_LPJ_G0032217.1 mouse_genomes_project 7 56667801 57108902 + MGP_LPJ_P0083873 Luzp2 protein_coding protein_coding MGP_LPJ_T0085366.1 MGP_LPJ_G0032638.1 mouse_genomes_project 7 109245025 109246392 - MGP_LPJ_P0085366 Usp17le protein_coding protein_coding MGP_LPJ_T0081844.1 MGP_LPJ_G0031700.1 mouse_genomes_project 7 18170833 18173494 - MGP_LPJ_P0081844 Bcl3 protein_coding protein_coding MGP_LPJ_T0081845.1 MGP_LPJ_G0031700.1 mouse_genomes_project 7 18170833 18185340 - MGP_LPJ_P0081845 Bcl3 protein_coding protein_coding MGP_LPJ_T0081846.1 MGP_LPJ_G0031700.1 mouse_genomes_project 7 18173489 18174262 - Bcl3 protein_coding retained_intron MGP_LPJ_T0081847.1 MGP_LPJ_G0031700.1 mouse_genomes_project 7 18173721 18175206 - Bcl3 protein_coding retained_intron MGP_LPJ_T0081848.1 MGP_LPJ_G0031700.1 mouse_genomes_project 7 18173867 18178545 - Bcl3 protein_coding processed_transcript MGP_LPJ_T0081849.1 MGP_LPJ_G0031700.1 mouse_genomes_project 7 18173958 18184727 - MGP_LPJ_P0081849 Bcl3 protein_coding protein_coding MGP_LPJ_T0081850.1 MGP_LPJ_G0031700.1 mouse_genomes_project 7 18174767 18185340 - Bcl3 protein_coding processed_transcript MGP_LPJ_T0084633.1 MGP_LPJ_G0032377.1 mouse_genomes_project 7 89722791 89743238 - MGP_LPJ_P0084633 Vmn2r76 protein_coding protein_coding MGP_LPJ_T0015886.1 MGP_LPJ_G0013977.1 mouse_genomes_project 7 146316255 146317618 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015835.1 MGP_LPJ_G0013926.1 mouse_genomes_project 7 109301540 109302593 + processed_pseudogene processed_pseudogene MGP_LPJ_T0081912.1 MGP_LPJ_G0031727.1 mouse_genomes_project 7 22995379 22996234 - MGP_LPJ_P0081912 Tescl protein_coding protein_coding MGP_LPJ_T0081960.1 MGP_LPJ_G0031740.1 mouse_genomes_project 7 23304563 23326659 + MGP_LPJ_P0081960 Phldb3 protein_coding protein_coding MGP_LPJ_T0081961.1 MGP_LPJ_G0031740.1 mouse_genomes_project 7 23305128 23326650 + MGP_LPJ_P0081961 Phldb3 protein_coding protein_coding MGP_LPJ_T0081962.1 MGP_LPJ_G0031740.1 mouse_genomes_project 7 23314622 23323974 + Phldb3 protein_coding retained_intron MGP_LPJ_T0081963.1 MGP_LPJ_G0031740.1 mouse_genomes_project 7 23315024 23317917 + Phldb3 protein_coding processed_transcript MGP_LPJ_T0081971.1 MGP_LPJ_G0031746.1 mouse_genomes_project 7 23499293 23505692 + MGP_LPJ_P0081971 Ceacam10 protein_coding nonsense_mediated_decay MGP_LPJ_T0081972.1 MGP_LPJ_G0031746.1 mouse_genomes_project 7 23499293 23505691 + MGP_LPJ_P0081972 Ceacam10 protein_coding protein_coding MGP_LPJ_T0081973.1 MGP_LPJ_G0031746.1 mouse_genomes_project 7 23505140 23505691 + Ceacam10 protein_coding retained_intron MGP_LPJ_T0083062.1 MGP_LPJ_G0031993.1 mouse_genomes_project 7 35311606 35318191 - MGP_LPJ_P0083062 Rgs9bp protein_coding protein_coding MGP_LPJ_T0080958.1 MGP_LPJ_G0031424.1 mouse_genomes_project 7 343088 363121 + MGP_LPJ_P0080958 Cacng6 protein_coding protein_coding MGP_LPJ_T0080959.1 MGP_LPJ_G0031424.1 mouse_genomes_project 7 343555 362615 + MGP_LPJ_P0080959 Cacng6 protein_coding protein_coding MGP_LPJ_T0083722.1 MGP_LPJ_G0032171.1 mouse_genomes_project 7 47463544 47500320 + MGP_LPJ_P0083722 Kcnc1 protein_coding protein_coding MGP_LPJ_T0083723.1 MGP_LPJ_G0032171.1 mouse_genomes_project 7 47464695 47505343 + MGP_LPJ_P0083723 Kcnc1 protein_coding protein_coding MGP_LPJ_T0083724.1 MGP_LPJ_G0032171.1 mouse_genomes_project 7 47489678 47494793 + Kcnc1 protein_coding processed_transcript MGP_LPJ_T0002348.1 MGP_LPJ_G0002256.1 mouse_genomes_project 7 150171386 150174878 - TEC TEC MGP_LPJ_T0083459.1 MGP_LPJ_G0032098.1 mouse_genomes_project 7 45892011 45898394 - MGP_LPJ_P0083459 Bcl2l12 protein_coding protein_coding MGP_LPJ_T0081492.1 MGP_LPJ_G0031599.1 mouse_genomes_project 7 14026089 14045623 + MGP_LPJ_P0081492 Napa protein_coding protein_coding MGP_LPJ_T0081493.1 MGP_LPJ_G0031599.1 mouse_genomes_project 7 14026234 14041184 + Napa protein_coding processed_transcript MGP_LPJ_T0081494.1 MGP_LPJ_G0031599.1 mouse_genomes_project 7 14026258 14040783 + Napa protein_coding retained_intron MGP_LPJ_T0081495.1 MGP_LPJ_G0031599.1 mouse_genomes_project 7 14026264 14036956 + Napa protein_coding processed_transcript MGP_LPJ_T0081496.1 MGP_LPJ_G0031599.1 mouse_genomes_project 7 14036697 14041874 + Napa protein_coding retained_intron MGP_LPJ_T0081497.1 MGP_LPJ_G0031599.1 mouse_genomes_project 7 14041292 14044207 + Napa protein_coding retained_intron MGP_LPJ_T0081498.1 MGP_LPJ_G0031599.1 mouse_genomes_project 7 14042751 14044387 + Napa protein_coding processed_transcript MGP_LPJ_T0018275.1 MGP_LPJ_G0015570.1 mouse_genomes_project 7 2112871 2119263 - processed_transcript processed_transcript MGP_LPJ_T0018276.1 MGP_LPJ_G0015570.1 mouse_genomes_project 7 2112872 2119178 - processed_transcript processed_transcript MGP_LPJ_T0085235.1 MGP_LPJ_G0032542.1 mouse_genomes_project 7 107312673 107313642 - MGP_LPJ_P0085235 Olfr571 protein_coding protein_coding MGP_LPJ_T0081036.1 MGP_LPJ_G0031440.1 mouse_genomes_project 7 918949 922859 - MGP_LPJ_P0081036 Gm15922 protein_coding protein_coding MGP_LPJ_T0087197.1 MGP_LPJ_G0033110.1 mouse_genomes_project 7 147483320 147486534 + MGP_LPJ_P0087197 Odf3 protein_coding protein_coding MGP_LPJ_T0087198.1 MGP_LPJ_G0033110.1 mouse_genomes_project 7 147483338 147486524 + MGP_LPJ_P0087198 Odf3 protein_coding protein_coding MGP_LPJ_T0087199.1 MGP_LPJ_G0033110.1 mouse_genomes_project 7 147483339 147486527 + Odf3 protein_coding retained_intron MGP_LPJ_T0085225.1 MGP_LPJ_G0032533.1 mouse_genomes_project 7 107117494 107122817 - MGP_LPJ_P0085225 Olfr559 protein_coding protein_coding MGP_LPJ_T0083204.1 MGP_LPJ_G0032030.1 mouse_genomes_project 7 44215563 44224428 + MGP_LPJ_P0083204 Vsig10l protein_coding protein_coding MGP_LPJ_T0083205.1 MGP_LPJ_G0032030.1 mouse_genomes_project 7 44215645 44223457 + MGP_LPJ_P0083205 Vsig10l protein_coding protein_coding MGP_LPJ_T0083206.1 MGP_LPJ_G0032030.1 mouse_genomes_project 7 44217089 44217746 + Vsig10l protein_coding retained_intron MGP_LPJ_T0083207.1 MGP_LPJ_G0032030.1 mouse_genomes_project 7 44218126 44220091 + Vsig10l protein_coding processed_transcript MGP_LPJ_T0083208.1 MGP_LPJ_G0032030.1 mouse_genomes_project 7 44220027 44223412 + MGP_LPJ_P0083208 Vsig10l protein_coding nonsense_mediated_decay MGP_LPJ_T0084863.1 MGP_LPJ_G0032446.1 mouse_genomes_project 7 102405204 102415819 - MGP_LPJ_P0084863 Tsku protein_coding protein_coding MGP_LPJ_T0084864.1 MGP_LPJ_G0032446.1 mouse_genomes_project 7 102405204 102415859 - MGP_LPJ_P0084864 Tsku protein_coding protein_coding MGP_LPJ_T0084865.1 MGP_LPJ_G0032446.1 mouse_genomes_project 7 102405204 102415819 - MGP_LPJ_P0084865 Tsku protein_coding protein_coding MGP_LPJ_T0084866.1 MGP_LPJ_G0032446.1 mouse_genomes_project 7 102405204 102415823 - MGP_LPJ_P0084866 Tsku protein_coding protein_coding MGP_LPJ_T0084867.1 MGP_LPJ_G0032446.1 mouse_genomes_project 7 102405322 102414610 - MGP_LPJ_P0084867 Tsku protein_coding protein_coding MGP_LPJ_T0084868.1 MGP_LPJ_G0032446.1 mouse_genomes_project 7 102405322 102414610 - MGP_LPJ_P0084868 Tsku protein_coding protein_coding MGP_LPJ_T0084869.1 MGP_LPJ_G0032446.1 mouse_genomes_project 7 102405404 102415819 - MGP_LPJ_P0084869 Tsku protein_coding protein_coding MGP_LPJ_T0084870.1 MGP_LPJ_G0032446.1 mouse_genomes_project 7 102408072 102414718 - Tsku protein_coding processed_transcript MGP_LPJ_T0086072.1 MGP_LPJ_G0032869.1 mouse_genomes_project 7 127645041 127662594 + MGP_LPJ_P0086072 Dctn5 protein_coding protein_coding MGP_LPJ_T0086073.1 MGP_LPJ_G0032869.1 mouse_genomes_project 7 127645054 127662594 + Dctn5 protein_coding retained_intron MGP_LPJ_T0086074.1 MGP_LPJ_G0032869.1 mouse_genomes_project 7 127645072 127647132 + MGP_LPJ_P0086074 Dctn5 protein_coding nonsense_mediated_decay MGP_LPJ_T0086075.1 MGP_LPJ_G0032869.1 mouse_genomes_project 7 127657444 127662131 + MGP_LPJ_P0086075 Dctn5 protein_coding nonsense_mediated_decay MGP_LPJ_T0085159.1 MGP_LPJ_G0032507.1 mouse_genomes_project 7 106407700 106440197 + MGP_LPJ_P0085159 protein_coding nonsense_mediated_decay MGP_LPJ_T0085160.1 MGP_LPJ_G0032507.1 mouse_genomes_project 7 106407700 106439749 + MGP_LPJ_P0085160 protein_coding protein_coding MGP_LPJ_T0085162.1 MGP_LPJ_G0032507.1 mouse_genomes_project 7 106407765 106439667 + MGP_LPJ_P0085162 protein_coding protein_coding MGP_LPJ_T0085163.1 MGP_LPJ_G0032507.1 mouse_genomes_project 7 106417833 106439667 + MGP_LPJ_P0085163 protein_coding nonsense_mediated_decay MGP_LPJ_T0085164.1 MGP_LPJ_G0032507.1 mouse_genomes_project 7 106417837 106439659 + MGP_LPJ_P0085164 protein_coding nonsense_mediated_decay MGP_LPJ_T0100955.1 MGP_LPJ_G0039218.1 mouse_genomes_project 7 46043395 46043479 - Snord33 snoRNA snoRNA MGP_LPJ_T0083128.1 MGP_LPJ_G0032004.1 mouse_genomes_project 7 38171676 38181110 - MGP_LPJ_P0083128 Pop4 protein_coding protein_coding MGP_LPJ_T0083129.1 MGP_LPJ_G0032004.1 mouse_genomes_project 7 38174026 38181014 - MGP_LPJ_P0083129 Pop4 protein_coding nonsense_mediated_decay MGP_LPJ_T0083130.1 MGP_LPJ_G0032004.1 mouse_genomes_project 7 38174096 38181056 - MGP_LPJ_P0083130 Pop4 protein_coding nonsense_mediated_decay MGP_LPJ_T0083131.1 MGP_LPJ_G0032004.1 mouse_genomes_project 7 38175577 38181036 - Pop4 protein_coding retained_intron MGP_LPJ_T0083132.1 MGP_LPJ_G0032004.1 mouse_genomes_project 7 38175782 38181060 - MGP_LPJ_P0083132 Pop4 protein_coding nonsense_mediated_decay MGP_LPJ_T0083133.1 MGP_LPJ_G0032004.1 mouse_genomes_project 7 38178062 38180962 - Pop4 protein_coding retained_intron MGP_LPJ_T0010858.1 MGP_LPJ_G0008976.1 mouse_genomes_project 7 15679765 15679875 + Gm25068 miRNA miRNA MGP_LPJ_T0101604.1 MGP_LPJ_G0039683.1 mouse_genomes_project 7 28797089 28821706 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0101605.1 MGP_LPJ_G0039683.1 mouse_genomes_project 7 28799025 28814853 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0102430.1 MGP_LPJ_G0040466.1 mouse_genomes_project 7 89619159 89620056 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0081215.1 MGP_LPJ_G0031471.1 mouse_genomes_project 7 1896168 1917568 - MGP_LPJ_P0081215 Isoc2b protein_coding protein_coding MGP_LPJ_T0008861.1 MGP_LPJ_G0007162.1 mouse_genomes_project 7 37951858 37971505 + Gm44635 lincRNA lincRNA MGP_LPJ_T0102433.1 MGP_LPJ_G0040469.1 mouse_genomes_project 7 89874743 89875371 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0010953.1 MGP_LPJ_G0009071.1 mouse_genomes_project 7 146619991 146620057 - Mir7062 miRNA miRNA MGP_LPJ_T0010871.1 MGP_LPJ_G0008989.1 mouse_genomes_project 7 26170101 26170221 + Mir1191 miRNA miRNA MGP_LPJ_T0098673.1 MGP_LPJ_G0036942.1 mouse_genomes_project 7 129807154 129912762 + Gm15338 sense_intronic sense_intronic MGP_LPJ_T0009050.1 MGP_LPJ_G0007283.1 mouse_genomes_project 7 133839633 133841940 - Gm26690 lincRNA lincRNA MGP_LPJ_T0008856.1 MGP_LPJ_G0007157.1 mouse_genomes_project 7 36977449 36980821 - Gm28076 lincRNA lincRNA MGP_LPJ_T0083184.1 MGP_LPJ_G0032022.1 mouse_genomes_project 7 44150951 44171149 + protein_coding retained_intron MGP_LPJ_T0083185.1 MGP_LPJ_G0032022.1 mouse_genomes_project 7 44150980 44171149 + protein_coding retained_intron MGP_LPJ_T0083186.1 MGP_LPJ_G0032022.1 mouse_genomes_project 7 44151185 44161483 + protein_coding retained_intron MGP_LPJ_T0082764.1 MGP_LPJ_G0031935.1 mouse_genomes_project 7 29917914 29928378 - MGP_LPJ_P0082764 Upk1a protein_coding protein_coding MGP_LPJ_T0005328.1 MGP_LPJ_G0004519.1 mouse_genomes_project 7 134654894 134655992 - Gm44672 antisense antisense MGP_LPJ_T0085372.1 MGP_LPJ_G0032644.1 mouse_genomes_project 7 109486815 109487754 - MGP_LPJ_P0085372 Olfr670 protein_coding protein_coding MGP_LPJ_T0085266.1 MGP_LPJ_G0032570.1 mouse_genomes_project 7 107960482 107961430 - MGP_LPJ_P0085266 Olfr610 protein_coding protein_coding MGP_LPJ_T0015845.1 MGP_LPJ_G0013936.1 mouse_genomes_project 7 115553278 115553608 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010886.1 MGP_LPJ_G0009004.1 mouse_genomes_project 7 45399156 45399229 - Mir7053 miRNA miRNA MGP_LPJ_T0081807.1 MGP_LPJ_G0031692.1 mouse_genomes_project 7 18023309 18028255 - MGP_LPJ_P0081807 protein_coding protein_coding MGP_LPJ_T0081808.1 MGP_LPJ_G0031692.1 mouse_genomes_project 7 18023314 18025292 - MGP_LPJ_P0081808 protein_coding protein_coding MGP_LPJ_T0081809.1 MGP_LPJ_G0031692.1 mouse_genomes_project 7 18023314 18032774 - MGP_LPJ_P0081809 protein_coding protein_coding MGP_LPJ_T0081810.1 MGP_LPJ_G0031692.1 mouse_genomes_project 7 18023314 18029343 - MGP_LPJ_P0081810 protein_coding protein_coding MGP_LPJ_T0081811.1 MGP_LPJ_G0031692.1 mouse_genomes_project 7 18024655 18032787 - MGP_LPJ_P0081811 protein_coding protein_coding MGP_LPJ_T0010907.1 MGP_LPJ_G0009025.1 mouse_genomes_project 7 63982200 63982260 - Mir344h-1 miRNA miRNA MGP_LPJ_T0082268.1 MGP_LPJ_G0031817.1 mouse_genomes_project 7 26489493 26510202 + MGP_LPJ_P0082268 Prx protein_coding protein_coding MGP_LPJ_T0082269.1 MGP_LPJ_G0031817.1 mouse_genomes_project 7 26489493 26510202 + MGP_LPJ_P0082269 Prx protein_coding protein_coding MGP_LPJ_T0082270.1 MGP_LPJ_G0031817.1 mouse_genomes_project 7 26497790 26510022 + MGP_LPJ_P0082270 Prx protein_coding protein_coding MGP_LPJ_T0082271.1 MGP_LPJ_G0031817.1 mouse_genomes_project 7 26497795 26510029 + MGP_LPJ_P0082271 Prx protein_coding protein_coding MGP_LPJ_T0081797.1 MGP_LPJ_G0031690.1 mouse_genomes_project 7 17955493 17978556 - Relb protein_coding retained_intron MGP_LPJ_T0081798.1 MGP_LPJ_G0031690.1 mouse_genomes_project 7 17955493 17978556 - Relb protein_coding retained_intron MGP_LPJ_T0081799.1 MGP_LPJ_G0031690.1 mouse_genomes_project 7 17955493 17978556 - Relb protein_coding retained_intron MGP_LPJ_T0081800.1 MGP_LPJ_G0031690.1 mouse_genomes_project 7 17955493 17978556 - MGP_LPJ_P0081800 Relb protein_coding protein_coding MGP_LPJ_T0081801.1 MGP_LPJ_G0031690.1 mouse_genomes_project 7 17955493 17978556 - MGP_LPJ_P0081801 Relb protein_coding protein_coding MGP_LPJ_T0081802.1 MGP_LPJ_G0031690.1 mouse_genomes_project 7 17955499 17978556 - MGP_LPJ_P0081802 Relb protein_coding protein_coding MGP_LPJ_T0081803.1 MGP_LPJ_G0031690.1 mouse_genomes_project 7 17965690 17977902 - Relb protein_coding processed_transcript MGP_LPJ_T0081804.1 MGP_LPJ_G0031690.1 mouse_genomes_project 7 17967084 17977591 - Relb protein_coding processed_transcript MGP_LPJ_T0081805.1 MGP_LPJ_G0031690.1 mouse_genomes_project 7 17967148 17977552 - Relb protein_coding processed_transcript MGP_LPJ_T0102305.1 MGP_LPJ_G0040342.1 mouse_genomes_project 7 9394423 9394622 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0084930.1 MGP_LPJ_G0032461.1 mouse_genomes_project 7 103748486 103751508 - MGP_LPJ_P0084930 Tpbgl protein_coding protein_coding MGP_LPJ_T0085297.1 MGP_LPJ_G0032598.1 mouse_genomes_project 7 108442910 108443858 + MGP_LPJ_P0085297 protein_coding protein_coding MGP_LPJ_T0010867.1 MGP_LPJ_G0008985.1 mouse_genomes_project 7 23969025 23969083 - Mir7048 miRNA miRNA MGP_LPJ_T0081858.1 MGP_LPJ_G0031705.1 mouse_genomes_project 7 18320709 18339947 - MGP_LPJ_P0081858 Igsf23 protein_coding protein_coding MGP_LPJ_T0100974.1 MGP_LPJ_G0039237.1 mouse_genomes_project 7 85286337 85286462 + Gm25907 snoRNA snoRNA MGP_LPJ_T0098310.1 MGP_LPJ_G0036591.1 mouse_genomes_project 7 134687551 134687669 - n-R5s158 rRNA rRNA MGP_LPJ_T0011696.1 MGP_LPJ_G0009814.1 mouse_genomes_project 7 36573315 36573611 - Gm24550 misc_RNA misc_RNA MGP_LPJ_T0085313.1 MGP_LPJ_G0032614.1 mouse_genomes_project 7 108690187 108692844 - MGP_LPJ_P0085313 Ubqln3 protein_coding protein_coding MGP_LPJ_T0085556.1 MGP_LPJ_G0032733.1 mouse_genomes_project 7 113286397 113287342 - MGP_LPJ_P0085556 Olfr493 protein_coding protein_coding MGP_LPJ_T0081780.1 MGP_LPJ_G0031683.1 mouse_genomes_project 7 17841922 17844436 - MGP_LPJ_P0081780 Bloc1s3 protein_coding protein_coding MGP_LPJ_T0081263.1 MGP_LPJ_G0031499.1 mouse_genomes_project 7 3334430 3355708 + MGP_LPJ_P0081263 Zfp444 protein_coding protein_coding MGP_LPJ_T0081264.1 MGP_LPJ_G0031499.1 mouse_genomes_project 7 3334686 3362163 + MGP_LPJ_P0081264 Zfp444 protein_coding protein_coding MGP_LPJ_T0081265.1 MGP_LPJ_G0031499.1 mouse_genomes_project 7 3334706 3363080 + MGP_LPJ_P0081265 Zfp444 protein_coding protein_coding MGP_LPJ_T0081266.1 MGP_LPJ_G0031499.1 mouse_genomes_project 7 3334717 3362162 + MGP_LPJ_P0081266 Zfp444 protein_coding protein_coding MGP_LPJ_T0081267.1 MGP_LPJ_G0031499.1 mouse_genomes_project 7 3338115 3355580 + MGP_LPJ_P0081267 Zfp444 protein_coding protein_coding MGP_LPJ_T0081268.1 MGP_LPJ_G0031499.1 mouse_genomes_project 7 3338288 3356188 + Zfp444 protein_coding processed_transcript MGP_LPJ_T0081269.1 MGP_LPJ_G0031499.1 mouse_genomes_project 7 3338343 3361587 + MGP_LPJ_P0081269 Zfp444 protein_coding protein_coding MGP_LPJ_T0081270.1 MGP_LPJ_G0031499.1 mouse_genomes_project 7 3352390 3359899 + MGP_LPJ_P0081270 Zfp444 protein_coding protein_coding MGP_LPJ_T0081271.1 MGP_LPJ_G0031499.1 mouse_genomes_project 7 3355332 3359974 + MGP_LPJ_P0081271 Zfp444 protein_coding protein_coding MGP_LPJ_T0087689.1 MGP_LPJ_G0033209.1 mouse_genomes_project 7 151806655 151811084 + MGP_LPJ_P0087689 Fgf15 protein_coding protein_coding MGP_LPJ_T0084628.1 MGP_LPJ_G0032372.1 mouse_genomes_project 7 88590701 88610678 - MGP_LPJ_P0084628 protein_coding protein_coding MGP_LPJ_T0099694.1 MGP_LPJ_G0037957.1 mouse_genomes_project 7 14168884 14169007 - Gm26473 snRNA snRNA MGP_LPJ_T0081422.1 MGP_LPJ_G0031568.1 mouse_genomes_project 7 10581225 10582152 - MGP_LPJ_P0081422 Vmn1r85 protein_coding protein_coding MGP_LPJ_T0081644.1 MGP_LPJ_G0031643.1 mouse_genomes_project 7 16720550 16765593 - MGP_LPJ_P0081644 protein_coding protein_coding MGP_LPJ_T0005335.1 MGP_LPJ_G0004526.1 mouse_genomes_project 7 149435347 149447097 + Igf2os antisense antisense MGP_LPJ_T0005336.1 MGP_LPJ_G0004526.1 mouse_genomes_project 7 149435366 149436357 + Igf2os antisense antisense MGP_LPJ_T0005337.1 MGP_LPJ_G0004526.1 mouse_genomes_project 7 149440770 149441725 + Igf2os antisense antisense MGP_LPJ_T0018356.1 MGP_LPJ_G0015602.1 mouse_genomes_project 7 114395909 114402179 + 1700095J03Rik processed_transcript processed_transcript MGP_LPJ_T0085719.1 MGP_LPJ_G0032787.1 mouse_genomes_project 7 117512351 117678338 + MGP_LPJ_P0085719 Parva protein_coding protein_coding MGP_LPJ_T0085720.1 MGP_LPJ_G0032787.1 mouse_genomes_project 7 117512560 117680403 + MGP_LPJ_P0085720 Parva protein_coding protein_coding MGP_LPJ_T0085721.1 MGP_LPJ_G0032787.1 mouse_genomes_project 7 117512759 117639158 + MGP_LPJ_P0085721 Parva protein_coding nonsense_mediated_decay MGP_LPJ_T0085722.1 MGP_LPJ_G0032787.1 mouse_genomes_project 7 117584543 117632612 + Parva protein_coding processed_transcript MGP_LPJ_T0085723.1 MGP_LPJ_G0032787.1 mouse_genomes_project 7 117603069 117677679 + MGP_LPJ_P0085723 Parva protein_coding protein_coding MGP_LPJ_T0085724.1 MGP_LPJ_G0032787.1 mouse_genomes_project 7 117656839 117667322 + Parva protein_coding processed_transcript MGP_LPJ_T0002291.1 MGP_LPJ_G0002199.1 mouse_genomes_project 7 79596553 79597504 + TEC TEC MGP_LPJ_T0084176.1 MGP_LPJ_G0032276.1 mouse_genomes_project 7 76540434 76577388 + MGP_LPJ_P0084176 Fam174b protein_coding protein_coding MGP_LPJ_T0084177.1 MGP_LPJ_G0032276.1 mouse_genomes_project 7 76566354 76575626 + MGP_LPJ_P0084177 Fam174b protein_coding protein_coding MGP_LPJ_T0084178.1 MGP_LPJ_G0032276.1 mouse_genomes_project 7 76566418 76576487 + Fam174b protein_coding retained_intron MGP_LPJ_T0081727.1 MGP_LPJ_G0031668.1 mouse_genomes_project 7 17518500 17530529 + MGP_LPJ_P0081727 Gpr4 protein_coding protein_coding MGP_LPJ_T0083288.1 MGP_LPJ_G0032063.1 mouse_genomes_project 7 45082378 45088252 - MGP_LPJ_P0083288 Acpt protein_coding protein_coding MGP_LPJ_T0083289.1 MGP_LPJ_G0032063.1 mouse_genomes_project 7 45083959 45088252 - MGP_LPJ_P0083289 Acpt protein_coding protein_coding MGP_LPJ_T0083290.1 MGP_LPJ_G0032063.1 mouse_genomes_project 7 45083966 45088079 - MGP_LPJ_P0083290 Acpt protein_coding protein_coding MGP_LPJ_T0010945.1 MGP_LPJ_G0009063.1 mouse_genomes_project 7 133554585 133554661 + Mir762 miRNA miRNA MGP_LPJ_T0086529.1 MGP_LPJ_G0032948.1 mouse_genomes_project 7 133099921 133139787 + MGP_LPJ_P0086529 Itgal protein_coding protein_coding MGP_LPJ_T0086530.1 MGP_LPJ_G0032948.1 mouse_genomes_project 7 133099952 133139788 + MGP_LPJ_P0086530 Itgal protein_coding protein_coding MGP_LPJ_T0086531.1 MGP_LPJ_G0032948.1 mouse_genomes_project 7 133099976 133135941 + MGP_LPJ_P0086531 Itgal protein_coding protein_coding MGP_LPJ_T0086532.1 MGP_LPJ_G0032948.1 mouse_genomes_project 7 133100071 133138378 + MGP_LPJ_P0086532 Itgal protein_coding protein_coding MGP_LPJ_T0086533.1 MGP_LPJ_G0032948.1 mouse_genomes_project 7 133101091 133103257 + Itgal protein_coding processed_transcript MGP_LPJ_T0086534.1 MGP_LPJ_G0032948.1 mouse_genomes_project 7 133113571 133139787 + MGP_LPJ_P0086534 Itgal protein_coding protein_coding MGP_LPJ_T0002327.1 MGP_LPJ_G0002235.1 mouse_genomes_project 7 128529945 128530938 - TEC TEC MGP_LPJ_T0010926.1 MGP_LPJ_G0009044.1 mouse_genomes_project 7 84827612 84827685 + Mir1839 miRNA miRNA MGP_LPJ_T0085210.1 MGP_LPJ_G0032519.1 mouse_genomes_project 7 106866211 106868781 - MGP_LPJ_P0085210 Olfr545 protein_coding protein_coding MGP_LPJ_T0082859.1 MGP_LPJ_G0031957.1 mouse_genomes_project 7 30365823 30368344 + Fam187b protein_coding retained_intron MGP_LPJ_T0082860.1 MGP_LPJ_G0031957.1 mouse_genomes_project 7 30365837 30383629 + MGP_LPJ_P0082860 Fam187b protein_coding protein_coding MGP_LPJ_T0082861.1 MGP_LPJ_G0031957.1 mouse_genomes_project 7 30369068 30383635 + MGP_LPJ_P0082861 Fam187b protein_coding protein_coding MGP_LPJ_T0082862.1 MGP_LPJ_G0031957.1 mouse_genomes_project 7 30373894 30383371 + MGP_LPJ_P0082862 Fam187b protein_coding protein_coding MGP_LPJ_T0086603.1 MGP_LPJ_G0032963.1 mouse_genomes_project 7 133431020 133447052 + MGP_LPJ_P0086603 Rnf40 protein_coding protein_coding MGP_LPJ_T0086604.1 MGP_LPJ_G0032963.1 mouse_genomes_project 7 133431172 133445847 + MGP_LPJ_P0086604 Rnf40 protein_coding protein_coding MGP_LPJ_T0086605.1 MGP_LPJ_G0032963.1 mouse_genomes_project 7 133431172 133445838 + MGP_LPJ_P0086605 Rnf40 protein_coding protein_coding MGP_LPJ_T0086606.1 MGP_LPJ_G0032963.1 mouse_genomes_project 7 133434668 133436978 + Rnf40 protein_coding retained_intron MGP_LPJ_T0086607.1 MGP_LPJ_G0032963.1 mouse_genomes_project 7 133435129 133438484 + Rnf40 protein_coding retained_intron MGP_LPJ_T0086608.1 MGP_LPJ_G0032963.1 mouse_genomes_project 7 133439064 133442856 + Rnf40 protein_coding retained_intron MGP_LPJ_T0086618.1 MGP_LPJ_G0032965.1 mouse_genomes_project 7 133501860 133554884 - MGP_LPJ_P0086618 Bcl7c protein_coding nonsense_mediated_decay MGP_LPJ_T0086619.1 MGP_LPJ_G0032965.1 mouse_genomes_project 7 133507196 133554738 - MGP_LPJ_P0086619 Bcl7c protein_coding protein_coding MGP_LPJ_T0086620.1 MGP_LPJ_G0032965.1 mouse_genomes_project 7 133507352 133554561 - MGP_LPJ_P0086620 Bcl7c protein_coding nonsense_mediated_decay MGP_LPJ_T0086621.1 MGP_LPJ_G0032965.1 mouse_genomes_project 7 133551067 133554626 - MGP_LPJ_P0086621 Bcl7c protein_coding protein_coding MGP_LPJ_T0086622.1 MGP_LPJ_G0032965.1 mouse_genomes_project 7 133551086 133553403 - MGP_LPJ_P0086622 Bcl7c protein_coding nonsense_mediated_decay MGP_LPJ_T0086623.1 MGP_LPJ_G0032965.1 mouse_genomes_project 7 133551892 133554174 - Bcl7c protein_coding processed_transcript MGP_LPJ_T0015723.1 MGP_LPJ_G0013814.1 mouse_genomes_project 7 38553542 38557766 - processed_pseudogene processed_pseudogene MGP_LPJ_T0008860.1 MGP_LPJ_G0007161.1 mouse_genomes_project 7 37942678 37954278 - Gm45106 lincRNA lincRNA MGP_LPJ_T0100971.1 MGP_LPJ_G0039234.1 mouse_genomes_project 7 70057542 70057679 - Gm23233 snoRNA snoRNA MGP_LPJ_T0098309.1 MGP_LPJ_G0036590.1 mouse_genomes_project 7 121882496 121882621 - n-R5s157 rRNA rRNA MGP_LPJ_T0005307.1 MGP_LPJ_G0004503.1 mouse_genomes_project 7 126955262 127082833 - 4933432K03Rik antisense antisense MGP_LPJ_T0005308.1 MGP_LPJ_G0004503.1 mouse_genomes_project 7 127052200 127082835 - 4933432K03Rik antisense antisense MGP_LPJ_T0005309.1 MGP_LPJ_G0004503.1 mouse_genomes_project 7 127082274 127100657 - 4933432K03Rik antisense antisense MGP_LPJ_T0086021.1 MGP_LPJ_G0032855.1 mouse_genomes_project 7 126493636 126495481 - MGP_LPJ_P0086021 protein_coding protein_coding MGP_LPJ_T0100970.1 MGP_LPJ_G0039233.1 mouse_genomes_project 7 64898037 64898165 + Gm22494 snoRNA snoRNA MGP_LPJ_T0015790.1 MGP_LPJ_G0013881.1 mouse_genomes_project 7 78269624 78269828 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099731.1 MGP_LPJ_G0037994.1 mouse_genomes_project 7 114996566 114996707 + Gm23100 snRNA snRNA MGP_LPJ_T0102450.1 MGP_LPJ_G0040486.1 mouse_genomes_project 7 108382262 108382391 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0085317.1 MGP_LPJ_G0032617.1 mouse_genomes_project 7 108732310 108733261 - MGP_LPJ_P0085317 Olfr648 protein_coding protein_coding MGP_LPJ_T0081851.1 MGP_LPJ_G0031701.1 mouse_genomes_project 7 18214465 18220791 + MGP_LPJ_P0081851 Gm19345 protein_coding protein_coding MGP_LPJ_T0085295.1 MGP_LPJ_G0032596.1 mouse_genomes_project 7 108415538 108416474 - MGP_LPJ_P0085295 Olfr66 protein_coding protein_coding MGP_LPJ_T0085270.1 MGP_LPJ_G0032574.1 mouse_genomes_project 7 108030592 108031534 + MGP_LPJ_P0085270 Olfr615 protein_coding protein_coding MGP_LPJ_T0084513.1 MGP_LPJ_G0032334.1 mouse_genomes_project 7 84636844 84748935 - MGP_LPJ_P0084513 Cpeb1 protein_coding protein_coding MGP_LPJ_T0084514.1 MGP_LPJ_G0032334.1 mouse_genomes_project 7 84636846 84728226 - MGP_LPJ_P0084514 Cpeb1 protein_coding protein_coding MGP_LPJ_T0084515.1 MGP_LPJ_G0032334.1 mouse_genomes_project 7 84636847 84748935 - MGP_LPJ_P0084515 Cpeb1 protein_coding protein_coding MGP_LPJ_T0084516.1 MGP_LPJ_G0032334.1 mouse_genomes_project 7 84639139 84640329 - Cpeb1 protein_coding retained_intron MGP_LPJ_T0084517.1 MGP_LPJ_G0032334.1 mouse_genomes_project 7 84639420 84645814 - Cpeb1 protein_coding processed_transcript MGP_LPJ_T0084518.1 MGP_LPJ_G0032334.1 mouse_genomes_project 7 84651404 84663103 - Cpeb1 protein_coding retained_intron MGP_LPJ_T0084519.1 MGP_LPJ_G0032334.1 mouse_genomes_project 7 84651404 84749642 - Cpeb1 protein_coding processed_transcript MGP_LPJ_T0084520.1 MGP_LPJ_G0032334.1 mouse_genomes_project 7 84651568 84663147 - Cpeb1 protein_coding processed_transcript MGP_LPJ_T0084521.1 MGP_LPJ_G0032334.1 mouse_genomes_project 7 84728072 84749569 - Cpeb1 protein_coding processed_transcript MGP_LPJ_T0010938.1 MGP_LPJ_G0009056.1 mouse_genomes_project 7 120358602 120358682 + Gm27684 miRNA miRNA MGP_LPJ_T0083813.1 MGP_LPJ_G0032203.1 mouse_genomes_project 7 50436155 50452610 - MGP_LPJ_P0083813 E2f8 protein_coding protein_coding MGP_LPJ_T0083814.1 MGP_LPJ_G0032203.1 mouse_genomes_project 7 50436155 50452056 - MGP_LPJ_P0083814 E2f8 protein_coding protein_coding MGP_LPJ_T0083815.1 MGP_LPJ_G0032203.1 mouse_genomes_project 7 50441833 50446217 - E2f8 protein_coding retained_intron MGP_LPJ_T0083816.1 MGP_LPJ_G0032203.1 mouse_genomes_project 7 50449836 50452019 - E2f8 protein_coding retained_intron MGP_LPJ_T0082045.1 MGP_LPJ_G0031761.1 mouse_genomes_project 7 23993907 24003819 - MGP_LPJ_P0082045 Erf protein_coding protein_coding MGP_LPJ_T0082046.1 MGP_LPJ_G0031761.1 mouse_genomes_project 7 23998508 24003788 - MGP_LPJ_P0082046 Erf protein_coding protein_coding MGP_LPJ_T0084025.1 MGP_LPJ_G0032247.1 mouse_genomes_project 7 67261687 67267635 - MGP_LPJ_P0084025 Ndnl2 protein_coding protein_coding MGP_LPJ_T0009045.1 MGP_LPJ_G0007280.1 mouse_genomes_project 7 133089526 133093394 + Gm44728 lincRNA lincRNA MGP_LPJ_T0009046.1 MGP_LPJ_G0007280.1 mouse_genomes_project 7 133090012 133093806 + Gm44728 lincRNA lincRNA MGP_LPJ_T0015801.1 MGP_LPJ_G0013892.1 mouse_genomes_project 7 86339405 86339723 - processed_pseudogene processed_pseudogene MGP_LPJ_T0084580.1 MGP_LPJ_G0032352.1 mouse_genomes_project 7 86537038 86544307 + MGP_LPJ_P0084580 protein_coding protein_coding MGP_LPJ_T0086539.1 MGP_LPJ_G0032952.1 mouse_genomes_project 7 133194518 133197493 - MGP_LPJ_P0086539 E430018J23Rik protein_coding protein_coding MGP_LPJ_T0002293.1 MGP_LPJ_G0002201.1 mouse_genomes_project 7 80419697 80420550 + TEC TEC MGP_LPJ_T0005232.1 MGP_LPJ_G0004452.1 mouse_genomes_project 7 40851816 40943843 - antisense antisense MGP_LPJ_T0005233.1 MGP_LPJ_G0004452.1 mouse_genomes_project 7 40891104 40941284 - antisense antisense MGP_LPJ_T0005234.1 MGP_LPJ_G0004452.1 mouse_genomes_project 7 40893215 40918314 - antisense antisense MGP_LPJ_T0005235.1 MGP_LPJ_G0004452.1 mouse_genomes_project 7 40918496 40941562 - antisense antisense MGP_LPJ_T0098671.1 MGP_LPJ_G0036940.1 mouse_genomes_project 7 124882560 124884863 - Gm26967 sense_intronic sense_intronic MGP_LPJ_T0099710.1 MGP_LPJ_G0037973.1 mouse_genomes_project 7 57084087 57084194 - Gm24116 snRNA snRNA MGP_LPJ_T0009032.1 MGP_LPJ_G0007274.1 mouse_genomes_project 7 132073028 132076253 - Gm45142 lincRNA lincRNA MGP_LPJ_T0009033.1 MGP_LPJ_G0007274.1 mouse_genomes_project 7 132075278 132076275 - Gm45142 lincRNA lincRNA MGP_LPJ_T0015824.1 MGP_LPJ_G0013915.1 mouse_genomes_project 7 102940741 102941105 - processed_pseudogene processed_pseudogene MGP_LPJ_T0082403.1 MGP_LPJ_G0031856.1 mouse_genomes_project 7 27847035 27853490 + MGP_LPJ_P0082403 Fbxo27 protein_coding protein_coding MGP_LPJ_T0082404.1 MGP_LPJ_G0031856.1 mouse_genomes_project 7 27847225 27847701 + MGP_LPJ_P0082404 Fbxo27 protein_coding protein_coding MGP_LPJ_T0082405.1 MGP_LPJ_G0031856.1 mouse_genomes_project 7 27847482 27853494 + MGP_LPJ_P0082405 Fbxo27 protein_coding protein_coding MGP_LPJ_T0082406.1 MGP_LPJ_G0031856.1 mouse_genomes_project 7 27850802 27852113 + Fbxo27 protein_coding processed_transcript MGP_LPJ_T0086802.1 MGP_LPJ_G0033000.1 mouse_genomes_project 7 134432785 134458153 + MGP_LPJ_P0086802 Bag3 protein_coding protein_coding MGP_LPJ_T0102294.1 MGP_LPJ_G0040331.1 mouse_genomes_project 7 7723783 7727579 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008839.1 MGP_LPJ_G0007141.1 mouse_genomes_project 7 30245893 30247206 + Gm29440 lincRNA lincRNA MGP_LPJ_T0083720.1 MGP_LPJ_G0032169.1 mouse_genomes_project 7 47300037 47373408 + MGP_LPJ_P0083720 Otog protein_coding protein_coding MGP_LPJ_T0084047.1 MGP_LPJ_G0032251.1 mouse_genomes_project 7 68296814 68387820 + MGP_LPJ_P0084047 Pcsk6 protein_coding protein_coding MGP_LPJ_T0084048.1 MGP_LPJ_G0032251.1 mouse_genomes_project 7 68297109 68485148 + MGP_LPJ_P0084048 Pcsk6 protein_coding protein_coding MGP_LPJ_T0084049.1 MGP_LPJ_G0032251.1 mouse_genomes_project 7 68297216 68485096 + MGP_LPJ_P0084049 Pcsk6 protein_coding protein_coding MGP_LPJ_T0084050.1 MGP_LPJ_G0032251.1 mouse_genomes_project 7 68297512 68485102 + MGP_LPJ_P0084050 Pcsk6 protein_coding protein_coding MGP_LPJ_T0084051.1 MGP_LPJ_G0032251.1 mouse_genomes_project 7 68387847 68398046 + Pcsk6 protein_coding retained_intron MGP_LPJ_T0084052.1 MGP_LPJ_G0032251.1 mouse_genomes_project 7 68473181 68478290 + Pcsk6 protein_coding retained_intron MGP_LPJ_T0081344.1 MGP_LPJ_G0031543.1 mouse_genomes_project 7 9739874 9740792 + MGP_LPJ_P0081344 Vmn1r82 protein_coding protein_coding MGP_LPJ_T0081345.1 MGP_LPJ_G0031543.1 mouse_genomes_project 7 9739877 9740792 + MGP_LPJ_P0081345 Vmn1r82 protein_coding protein_coding MGP_LPJ_T0010868.1 MGP_LPJ_G0008986.1 mouse_genomes_project 7 24622509 24622605 - Gm24865 miRNA miRNA MGP_LPJ_T0101005.1 MGP_LPJ_G0039268.1 mouse_genomes_project 7 150351621 150351748 - Gm23297 snoRNA snoRNA MGP_LPJ_T0009073.1 MGP_LPJ_G0007300.1 mouse_genomes_project 7 149345495 149349414 - H19 lincRNA lincRNA MGP_LPJ_T0009074.1 MGP_LPJ_G0007300.1 mouse_genomes_project 7 149345524 149348080 - H19 lincRNA lincRNA MGP_LPJ_T0009075.1 MGP_LPJ_G0007300.1 mouse_genomes_project 7 149345600 149346505 - H19 lincRNA lincRNA MGP_LPJ_T0009076.1 MGP_LPJ_G0007300.1 mouse_genomes_project 7 149346262 149346877 - H19 lincRNA lincRNA MGP_LPJ_T0009077.1 MGP_LPJ_G0007300.1 mouse_genomes_project 7 149346473 149348062 - H19 lincRNA lincRNA MGP_LPJ_T0084253.1 MGP_LPJ_G0032290.1 mouse_genomes_project 7 82221594 82237089 - MGP_LPJ_P0084253 Hapln3 protein_coding protein_coding MGP_LPJ_T0084254.1 MGP_LPJ_G0032290.1 mouse_genomes_project 7 82222230 82237066 - MGP_LPJ_P0084254 Hapln3 protein_coding protein_coding MGP_LPJ_T0084255.1 MGP_LPJ_G0032290.1 mouse_genomes_project 7 82223512 82237084 - MGP_LPJ_P0084255 Hapln3 protein_coding nonsense_mediated_decay MGP_LPJ_T0084256.1 MGP_LPJ_G0032290.1 mouse_genomes_project 7 82228230 82234743 - Hapln3 protein_coding processed_transcript MGP_LPJ_T0081869.1 MGP_LPJ_G0031715.1 mouse_genomes_project 7 22262668 22264994 + MGP_LPJ_P0081869 Vmn1r174 protein_coding protein_coding MGP_LPJ_T0086474.1 MGP_LPJ_G0032935.1 mouse_genomes_project 7 132812107 132813336 - MGP_LPJ_P0086474 Kif22 protein_coding protein_coding MGP_LPJ_T0086475.1 MGP_LPJ_G0032935.1 mouse_genomes_project 7 132812109 132826631 - MGP_LPJ_P0086475 Kif22 protein_coding protein_coding MGP_LPJ_T0086476.1 MGP_LPJ_G0032935.1 mouse_genomes_project 7 132812110 132812495 - Kif22 protein_coding retained_intron MGP_LPJ_T0086477.1 MGP_LPJ_G0032935.1 mouse_genomes_project 7 132813482 132817083 - Kif22 protein_coding retained_intron MGP_LPJ_T0086478.1 MGP_LPJ_G0032935.1 mouse_genomes_project 7 132816606 132826569 - Kif22 protein_coding retained_intron MGP_LPJ_T0086479.1 MGP_LPJ_G0032935.1 mouse_genomes_project 7 132817963 132826566 - MGP_LPJ_P0086479 Kif22 protein_coding protein_coding MGP_LPJ_T0010895.1 MGP_LPJ_G0009013.1 mouse_genomes_project 7 55783869 55783977 - Gm27921 miRNA miRNA MGP_LPJ_T0085502.1 MGP_LPJ_G0032687.1 mouse_genomes_project 7 111765061 111766012 - MGP_LPJ_P0085502 Olfr700 protein_coding protein_coding MGP_LPJ_T0081631.1 MGP_LPJ_G0031634.1 mouse_genomes_project 7 15883629 15886693 + MGP_LPJ_P0081631 Ceacam14 protein_coding protein_coding MGP_LPJ_T0083156.1 MGP_LPJ_G0032014.1 mouse_genomes_project 7 41909451 41923716 + MGP_LPJ_P0083156 Zfp788 protein_coding protein_coding MGP_LPJ_T0083157.1 MGP_LPJ_G0032014.1 mouse_genomes_project 7 41909779 41927046 + MGP_LPJ_P0083157 Zfp788 protein_coding protein_coding MGP_LPJ_T0083158.1 MGP_LPJ_G0032014.1 mouse_genomes_project 7 41909804 41924526 + MGP_LPJ_P0083158 Zfp788 protein_coding protein_coding MGP_LPJ_T0083159.1 MGP_LPJ_G0032014.1 mouse_genomes_project 7 41909806 41925165 + MGP_LPJ_P0083159 Zfp788 protein_coding protein_coding MGP_LPJ_T0083160.1 MGP_LPJ_G0032014.1 mouse_genomes_project 7 41909812 41927099 + MGP_LPJ_P0083160 Zfp788 protein_coding protein_coding MGP_LPJ_T0083161.1 MGP_LPJ_G0032014.1 mouse_genomes_project 7 41909825 41927865 + MGP_LPJ_P0083161 Zfp788 protein_coding protein_coding MGP_LPJ_T0083162.1 MGP_LPJ_G0032014.1 mouse_genomes_project 7 41923751 41926764 + MGP_LPJ_P0083162 Zfp788 protein_coding protein_coding MGP_LPJ_T0002227.1 MGP_LPJ_G0002136.1 mouse_genomes_project 7 23365537 23365775 + TEC TEC MGP_LPJ_T0083684.1 MGP_LPJ_G0032160.1 mouse_genomes_project 7 46918742 46930190 - Syngr4 protein_coding processed_transcript MGP_LPJ_T0083685.1 MGP_LPJ_G0032160.1 mouse_genomes_project 7 46920409 46929274 - MGP_LPJ_P0083685 Syngr4 protein_coding protein_coding MGP_LPJ_T0083013.1 MGP_LPJ_G0031983.1 mouse_genomes_project 7 34809885 34812558 + MGP_LPJ_P0083013 Cebpa protein_coding protein_coding MGP_LPJ_T0083014.1 MGP_LPJ_G0031983.1 mouse_genomes_project 7 34809895 34812558 + MGP_LPJ_P0083014 Cebpa protein_coding protein_coding MGP_LPJ_T0102328.1 MGP_LPJ_G0040365.1 mouse_genomes_project 7 12283599 12284094 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0081629.1 MGP_LPJ_G0031632.1 mouse_genomes_project 7 15206154 15218069 + MGP_LPJ_P0081629 Psg29 protein_coding protein_coding MGP_LPJ_T0086415.1 MGP_LPJ_G0032923.1 mouse_genomes_project 7 132638240 132641453 - MGP_LPJ_P0086415 Taok2 protein_coding unknown_likely_coding MGP_LPJ_T0086416.1 MGP_LPJ_G0032923.1 mouse_genomes_project 7 132638243 132657258 - MGP_LPJ_P0086416 Taok2 protein_coding protein_coding MGP_LPJ_T0086417.1 MGP_LPJ_G0032923.1 mouse_genomes_project 7 132639061 132639811 - Taok2 protein_coding retained_intron MGP_LPJ_T0086418.1 MGP_LPJ_G0032923.1 mouse_genomes_project 7 132642057 132657258 - MGP_LPJ_P0086418 Taok2 protein_coding protein_coding MGP_LPJ_T0086419.1 MGP_LPJ_G0032923.1 mouse_genomes_project 7 132652351 132655514 - Taok2 protein_coding retained_intron MGP_LPJ_T0101602.1 MGP_LPJ_G0039682.1 mouse_genomes_project 7 15725630 15735361 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101603.1 MGP_LPJ_G0039682.1 mouse_genomes_project 7 15725630 15734992 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0002249.1 MGP_LPJ_G0002158.1 mouse_genomes_project 7 44483735 44484169 + TEC TEC MGP_LPJ_T0082086.1 MGP_LPJ_G0031771.1 mouse_genomes_project 7 24239589 24255344 - MGP_LPJ_P0082086 Ceacam1 protein_coding protein_coding MGP_LPJ_T0085639.1 MGP_LPJ_G0032771.1 mouse_genomes_project 7 115055619 115089808 + MGP_LPJ_P0085639 Zfp143 protein_coding protein_coding MGP_LPJ_T0085640.1 MGP_LPJ_G0032771.1 mouse_genomes_project 7 115055627 115089803 + MGP_LPJ_P0085640 Zfp143 protein_coding protein_coding MGP_LPJ_T0085690.1 MGP_LPJ_G0032781.1 mouse_genomes_project 7 116092777 116104516 - MGP_LPJ_P0085690 Eif4g2 protein_coding protein_coding MGP_LPJ_T0085691.1 MGP_LPJ_G0032781.1 mouse_genomes_project 7 116094538 116095321 - Eif4g2 protein_coding processed_transcript MGP_LPJ_T0085692.1 MGP_LPJ_G0032781.1 mouse_genomes_project 7 116094761 116096431 - Eif4g2 protein_coding retained_intron MGP_LPJ_T0085693.1 MGP_LPJ_G0032781.1 mouse_genomes_project 7 116095569 116096419 - MGP_LPJ_P0085693 Eif4g2 protein_coding protein_coding MGP_LPJ_T0085694.1 MGP_LPJ_G0032781.1 mouse_genomes_project 7 116096307 116096869 - Eif4g2 protein_coding retained_intron MGP_LPJ_T0085695.1 MGP_LPJ_G0032781.1 mouse_genomes_project 7 116097042 116097555 - Eif4g2 protein_coding retained_intron MGP_LPJ_T0085696.1 MGP_LPJ_G0032781.1 mouse_genomes_project 7 116097381 116098379 - Eif4g2 protein_coding processed_transcript MGP_LPJ_T0085697.1 MGP_LPJ_G0032781.1 mouse_genomes_project 7 116098692 116099921 - Eif4g2 protein_coding retained_intron MGP_LPJ_T0085698.1 MGP_LPJ_G0032781.1 mouse_genomes_project 7 116100119 116101534 - Eif4g2 protein_coding retained_intron MGP_LPJ_T0085699.1 MGP_LPJ_G0032781.1 mouse_genomes_project 7 116100591 116105216 - MGP_LPJ_P0085699 Eif4g2 protein_coding protein_coding MGP_LPJ_T0085700.1 MGP_LPJ_G0032781.1 mouse_genomes_project 7 116101507 116104392 - MGP_LPJ_P0085700 Eif4g2 protein_coding protein_coding MGP_LPJ_T0085701.1 MGP_LPJ_G0032781.1 mouse_genomes_project 7 116102615 116105024 - Eif4g2 protein_coding retained_intron MGP_LPJ_T0085702.1 MGP_LPJ_G0032781.1 mouse_genomes_project 7 116103113 116104050 - MGP_LPJ_P0085702 Eif4g2 protein_coding protein_coding MGP_LPJ_T0015780.1 MGP_LPJ_G0013871.1 mouse_genomes_project 7 71769331 71770330 + processed_pseudogene processed_pseudogene MGP_LPJ_T0084941.1 MGP_LPJ_G0032467.1 mouse_genomes_project 7 104052584 104120989 + MGP_LPJ_P0084941 Xrra1 protein_coding protein_coding MGP_LPJ_T0015693.1 MGP_LPJ_G0013784.1 mouse_genomes_project 7 24214827 24216139 - processed_pseudogene processed_pseudogene MGP_LPJ_T0102360.1 MGP_LPJ_G0040396.1 mouse_genomes_project 7 41016630 41022248 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0015879.1 MGP_LPJ_G0013970.1 mouse_genomes_project 7 134599240 134599524 + processed_pseudogene processed_pseudogene MGP_LPJ_T0085258.1 MGP_LPJ_G0032563.1 mouse_genomes_project 7 107873914 107876333 + MGP_LPJ_P0085258 protein_coding protein_coding MGP_LPJ_T0085260.1 MGP_LPJ_G0032563.1 mouse_genomes_project 7 107873939 107876522 + MGP_LPJ_P0085260 protein_coding protein_coding MGP_LPJ_T0084938.1 MGP_LPJ_G0032464.1 mouse_genomes_project 7 103896424 103898355 + MGP_LPJ_P0084938 Olfr520 protein_coding protein_coding MGP_LPJ_T0082554.1 MGP_LPJ_G0031888.1 mouse_genomes_project 7 29026984 29038286 + MGP_LPJ_P0082554 Zfp84 protein_coding protein_coding MGP_LPJ_T0008944.1 MGP_LPJ_G0007222.1 mouse_genomes_project 7 77918948 77964406 + Gm44904 lincRNA lincRNA MGP_LPJ_T0084189.1 MGP_LPJ_G0032279.1 mouse_genomes_project 7 78008699 78214451 - MGP_LPJ_P0084189 Sv2b protein_coding protein_coding MGP_LPJ_T0084190.1 MGP_LPJ_G0032279.1 mouse_genomes_project 7 78008702 78213569 - MGP_LPJ_P0084190 Sv2b protein_coding protein_coding MGP_LPJ_T0084191.1 MGP_LPJ_G0032279.1 mouse_genomes_project 7 78010139 78118590 - MGP_LPJ_P0084191 Sv2b protein_coding protein_coding MGP_LPJ_T0084192.1 MGP_LPJ_G0032279.1 mouse_genomes_project 7 78013748 78046943 - MGP_LPJ_P0084192 Sv2b protein_coding nonsense_mediated_decay MGP_LPJ_T0084193.1 MGP_LPJ_G0032279.1 mouse_genomes_project 7 78056684 78061347 - Sv2b protein_coding processed_transcript MGP_LPJ_T0084194.1 MGP_LPJ_G0032279.1 mouse_genomes_project 7 78056684 78061336 - Sv2b protein_coding processed_transcript MGP_LPJ_T0084195.1 MGP_LPJ_G0032279.1 mouse_genomes_project 7 78100798 78213499 - Sv2b protein_coding retained_intron MGP_LPJ_T0083454.1 MGP_LPJ_G0032094.1 mouse_genomes_project 7 45838608 45854004 + MGP_LPJ_P0083454 Tsks protein_coding protein_coding MGP_LPJ_T0083455.1 MGP_LPJ_G0032094.1 mouse_genomes_project 7 45838608 45854004 + MGP_LPJ_P0083455 Tsks protein_coding protein_coding MGP_LPJ_T0087166.1 MGP_LPJ_G0033086.1 mouse_genomes_project 7 146834381 146835439 - MGP_LPJ_P0087166 Olfr524 protein_coding protein_coding MGP_LPJ_T0015846.1 MGP_LPJ_G0013937.1 mouse_genomes_project 7 118464641 118465043 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008990.1 MGP_LPJ_G0007249.1 mouse_genomes_project 7 103750340 103753538 + Gm10605 lincRNA lincRNA MGP_LPJ_T0008991.1 MGP_LPJ_G0007249.1 mouse_genomes_project 7 103750543 103756097 + Gm10605 lincRNA lincRNA MGP_LPJ_T0083097.1 MGP_LPJ_G0031998.1 mouse_genomes_project 7 36514561 36597151 + MGP_LPJ_P0083097 Tshz3 protein_coding protein_coding MGP_LPJ_T0102289.1 MGP_LPJ_G0040326.1 mouse_genomes_project 7 1257861 1260479 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0015794.1 MGP_LPJ_G0013885.1 mouse_genomes_project 7 82546644 82546852 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015725.1 MGP_LPJ_G0013816.1 mouse_genomes_project 7 38557857 38558079 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099715.1 MGP_LPJ_G0037978.1 mouse_genomes_project 7 78583003 78583087 + Gm25282 snRNA snRNA MGP_LPJ_T0086023.1 MGP_LPJ_G0032857.1 mouse_genomes_project 7 126524484 126534977 - MGP_LPJ_P0086023 Igsf6 protein_coding protein_coding MGP_LPJ_T0085357.1 MGP_LPJ_G0032630.1 mouse_genomes_project 7 109018053 109019114 + MGP_LPJ_P0085357 Olfr652 protein_coding protein_coding MGP_LPJ_T0085358.1 MGP_LPJ_G0032630.1 mouse_genomes_project 7 109018133 109019081 + MGP_LPJ_P0085358 Olfr652 protein_coding protein_coding MGP_LPJ_T0100968.1 MGP_LPJ_G0039231.1 mouse_genomes_project 7 61921251 61921318 - Snord64 snoRNA snoRNA MGP_LPJ_T0085484.1 MGP_LPJ_G0032677.1 mouse_genomes_project 7 110420235 110427547 - MGP_LPJ_P0085484 Tpp1 protein_coding protein_coding MGP_LPJ_T0086908.1 MGP_LPJ_G0033020.1 mouse_genomes_project 7 137506922 137530773 - MGP_LPJ_P0086908 Ikzf5 protein_coding protein_coding MGP_LPJ_T0086909.1 MGP_LPJ_G0033020.1 mouse_genomes_project 7 137508638 137530749 - MGP_LPJ_P0086909 Ikzf5 protein_coding protein_coding MGP_LPJ_T0086910.1 MGP_LPJ_G0033020.1 mouse_genomes_project 7 137510918 137530514 - MGP_LPJ_P0086910 Ikzf5 protein_coding protein_coding MGP_LPJ_T0086911.1 MGP_LPJ_G0033020.1 mouse_genomes_project 7 137511787 137530747 - MGP_LPJ_P0086911 Ikzf5 protein_coding protein_coding MGP_LPJ_T0086912.1 MGP_LPJ_G0033020.1 mouse_genomes_project 7 137515851 137529216 - MGP_LPJ_P0086912 Ikzf5 protein_coding protein_coding MGP_LPJ_T0015708.1 MGP_LPJ_G0013799.1 mouse_genomes_project 7 30585991 30586778 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002323.1 MGP_LPJ_G0002231.1 mouse_genomes_project 7 127930806 127933956 + TEC TEC MGP_LPJ_T0086549.1 MGP_LPJ_G0032955.1 mouse_genomes_project 7 133271357 133279123 - MGP_LPJ_P0086549 Zfp689 protein_coding protein_coding MGP_LPJ_T0086550.1 MGP_LPJ_G0032955.1 mouse_genomes_project 7 133273719 133278958 - MGP_LPJ_P0086550 Zfp689 protein_coding protein_coding MGP_LPJ_T0081272.1 MGP_LPJ_G0031500.1 mouse_genomes_project 7 3368574 3387197 + MGP_LPJ_P0081272 Galp protein_coding protein_coding MGP_LPJ_T0081273.1 MGP_LPJ_G0031500.1 mouse_genomes_project 7 3373867 3382426 + Galp protein_coding processed_transcript MGP_LPJ_T0081937.1 MGP_LPJ_G0031733.1 mouse_genomes_project 7 23164362 23189158 + MGP_LPJ_P0081937 Cadm4 protein_coding protein_coding MGP_LPJ_T0081938.1 MGP_LPJ_G0031733.1 mouse_genomes_project 7 23184530 23187364 + Cadm4 protein_coding processed_transcript MGP_LPJ_T0082417.1 MGP_LPJ_G0031860.1 mouse_genomes_project 7 27916044 27918836 + MGP_LPJ_P0082417 Ccer2 protein_coding protein_coding MGP_LPJ_T0008926.1 MGP_LPJ_G0007208.1 mouse_genomes_project 7 75890166 75892276 + 4933435G04Rik lincRNA lincRNA MGP_LPJ_T0102340.1 MGP_LPJ_G0040376.1 mouse_genomes_project 7 30309038 30309517 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0083651.1 MGP_LPJ_G0032151.1 mouse_genomes_project 7 46737463 46745738 + MGP_LPJ_P0083651 Fam83e protein_coding protein_coding MGP_LPJ_T0083652.1 MGP_LPJ_G0032151.1 mouse_genomes_project 7 46737471 46741112 + Fam83e protein_coding retained_intron MGP_LPJ_T0083654.1 MGP_LPJ_G0032151.1 mouse_genomes_project 7 46742116 46745735 + Fam83e protein_coding processed_transcript MGP_LPJ_T0087032.1 MGP_LPJ_G0033046.1 mouse_genomes_project 7 141242397 141300201 - MGP_LPJ_P0087032 Fam196a protein_coding protein_coding MGP_LPJ_T0082596.1 MGP_LPJ_G0031902.1 mouse_genomes_project 7 29386827 29396944 + Zfp260 protein_coding processed_transcript MGP_LPJ_T0082597.1 MGP_LPJ_G0031902.1 mouse_genomes_project 7 29386844 29400276 + MGP_LPJ_P0082597 Zfp260 protein_coding protein_coding MGP_LPJ_T0082598.1 MGP_LPJ_G0031902.1 mouse_genomes_project 7 29387212 29392352 + Zfp260 protein_coding retained_intron MGP_LPJ_T0082599.1 MGP_LPJ_G0031902.1 mouse_genomes_project 7 29387219 29397412 + MGP_LPJ_P0082599 Zfp260 protein_coding protein_coding MGP_LPJ_T0082600.1 MGP_LPJ_G0031902.1 mouse_genomes_project 7 29387228 29400273 + Zfp260 protein_coding processed_transcript MGP_LPJ_T0082601.1 MGP_LPJ_G0031902.1 mouse_genomes_project 7 29387235 29400268 + MGP_LPJ_P0082601 Zfp260 protein_coding protein_coding MGP_LPJ_T0082602.1 MGP_LPJ_G0031902.1 mouse_genomes_project 7 29389994 29392341 + Zfp260 protein_coding retained_intron MGP_LPJ_T0083784.1 MGP_LPJ_G0032185.1 mouse_genomes_project 7 48107294 48111510 + protein_coding processed_transcript MGP_LPJ_T0083785.1 MGP_LPJ_G0032185.1 mouse_genomes_project 7 48107375 48111518 + protein_coding processed_transcript MGP_LPJ_T0083786.1 MGP_LPJ_G0032185.1 mouse_genomes_project 7 48110534 48111511 + MGP_LPJ_P0083786 protein_coding protein_coding MGP_LPJ_T0085304.1 MGP_LPJ_G0032605.1 mouse_genomes_project 7 108567847 108568798 - MGP_LPJ_P0085304 Olfr639 protein_coding protein_coding MGP_LPJ_T0081977.1 MGP_LPJ_G0031749.1 mouse_genomes_project 7 23604750 23610262 + MGP_LPJ_P0081977 Rps19 protein_coding protein_coding MGP_LPJ_T0081978.1 MGP_LPJ_G0031749.1 mouse_genomes_project 7 23605012 23610262 + MGP_LPJ_P0081978 Rps19 protein_coding nonsense_mediated_decay MGP_LPJ_T0081979.1 MGP_LPJ_G0031749.1 mouse_genomes_project 7 23605014 23608139 + Rps19 protein_coding retained_intron MGP_LPJ_T0081980.1 MGP_LPJ_G0031749.1 mouse_genomes_project 7 23605015 23610258 + MGP_LPJ_P0081980 Rps19 protein_coding protein_coding MGP_LPJ_T0081981.1 MGP_LPJ_G0031749.1 mouse_genomes_project 7 23605030 23609330 + MGP_LPJ_P0081981 Rps19 protein_coding protein_coding MGP_LPJ_T0081982.1 MGP_LPJ_G0031749.1 mouse_genomes_project 7 23605093 23610262 + MGP_LPJ_P0081982 Rps19 protein_coding protein_coding MGP_LPJ_T0081983.1 MGP_LPJ_G0031749.1 mouse_genomes_project 7 23605192 23609310 + MGP_LPJ_P0081983 Rps19 protein_coding protein_coding MGP_LPJ_T0081984.1 MGP_LPJ_G0031749.1 mouse_genomes_project 7 23605296 23609352 + MGP_LPJ_P0081984 Rps19 protein_coding protein_coding MGP_LPJ_T0081985.1 MGP_LPJ_G0031749.1 mouse_genomes_project 7 23608569 23610260 + Rps19 protein_coding retained_intron MGP_LPJ_T0081986.1 MGP_LPJ_G0031749.1 mouse_genomes_project 7 23609119 23610260 + Rps19 protein_coding processed_transcript MGP_LPJ_T0085757.1 MGP_LPJ_G0032796.1 mouse_genomes_project 7 119223318 119302493 - MGP_LPJ_P0085757 Rras2 protein_coding protein_coding MGP_LPJ_T0081219.1 MGP_LPJ_G0031475.1 mouse_genomes_project 7 1980975 2001540 + MGP_LPJ_P0081219 Ssc5d protein_coding protein_coding MGP_LPJ_T0086782.1 MGP_LPJ_G0032998.1 mouse_genomes_project 7 134276047 134319152 - MGP_LPJ_P0086782 Rgs10 protein_coding protein_coding MGP_LPJ_T0086783.1 MGP_LPJ_G0032998.1 mouse_genomes_project 7 134276311 134293906 - Rgs10 protein_coding processed_transcript MGP_LPJ_T0086784.1 MGP_LPJ_G0032998.1 mouse_genomes_project 7 134276427 134278702 - Rgs10 protein_coding processed_transcript MGP_LPJ_T0086785.1 MGP_LPJ_G0032998.1 mouse_genomes_project 7 134289042 134304432 - Rgs10 protein_coding retained_intron MGP_LPJ_T0086786.1 MGP_LPJ_G0032998.1 mouse_genomes_project 7 134302864 134319142 - MGP_LPJ_P0086786 Rgs10 protein_coding protein_coding MGP_LPJ_T0086787.1 MGP_LPJ_G0032998.1 mouse_genomes_project 7 134303135 134319737 - MGP_LPJ_P0086787 Rgs10 protein_coding protein_coding MGP_LPJ_T0101403.1 MGP_LPJ_G0039583.1 mouse_genomes_project 7 71162264 71163818 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101404.1 MGP_LPJ_G0039583.1 mouse_genomes_project 7 71162646 71163366 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0087068.1 MGP_LPJ_G0033061.1 mouse_genomes_project 7 145490793 145594036 + MGP_LPJ_P0087068 Jakmip3 protein_coding protein_coding MGP_LPJ_T0087069.1 MGP_LPJ_G0033061.1 mouse_genomes_project 7 145490813 145594030 + MGP_LPJ_P0087069 Jakmip3 protein_coding protein_coding MGP_LPJ_T0087070.1 MGP_LPJ_G0033061.1 mouse_genomes_project 7 145520225 145610845 + MGP_LPJ_P0087070 Jakmip3 protein_coding unknown_likely_coding MGP_LPJ_T0087071.1 MGP_LPJ_G0033061.1 mouse_genomes_project 7 145610794 145629949 + MGP_LPJ_P0087071 Jakmip3 protein_coding protein_coding MGP_LPJ_T0084376.1 MGP_LPJ_G0032315.1 mouse_genomes_project 7 83500790 83529747 - Rccd1 protein_coding retained_intron MGP_LPJ_T0084391.1 MGP_LPJ_G0032315.1 mouse_genomes_project 7 83524624 83534287 - MGP_LPJ_P0084391 Rccd1 protein_coding protein_coding MGP_LPJ_T0084392.1 MGP_LPJ_G0032315.1 mouse_genomes_project 7 83526342 83533988 - Rccd1 protein_coding retained_intron MGP_LPJ_T0084393.1 MGP_LPJ_G0032315.1 mouse_genomes_project 7 83526342 83534307 - MGP_LPJ_P0084393 Rccd1 protein_coding protein_coding MGP_LPJ_T0084394.1 MGP_LPJ_G0032315.1 mouse_genomes_project 7 83526389 83534317 - Rccd1 protein_coding retained_intron MGP_LPJ_T0084395.1 MGP_LPJ_G0032315.1 mouse_genomes_project 7 83526391 83528853 - Rccd1 protein_coding retained_intron MGP_LPJ_T0084396.1 MGP_LPJ_G0032315.1 mouse_genomes_project 7 83530564 83533983 - MGP_LPJ_P0084396 Rccd1 protein_coding protein_coding MGP_LPJ_T0084397.1 MGP_LPJ_G0032315.1 mouse_genomes_project 7 83530876 83534016 - Rccd1 protein_coding retained_intron MGP_LPJ_T0084398.1 MGP_LPJ_G0032315.1 mouse_genomes_project 7 83532271 83533997 - Rccd1 protein_coding retained_intron MGP_LPJ_T0084399.1 MGP_LPJ_G0032315.1 mouse_genomes_project 7 83533632 83534264 - Rccd1 protein_coding processed_transcript MGP_LPJ_T0015731.1 MGP_LPJ_G0013822.1 mouse_genomes_project 7 41558695 41562074 + processed_pseudogene processed_pseudogene MGP_LPJ_T0082272.1 MGP_LPJ_G0031818.1 mouse_genomes_project 7 26515360 26523269 + MGP_LPJ_P0082272 Hipk4 protein_coding protein_coding MGP_LPJ_T0082273.1 MGP_LPJ_G0031818.1 mouse_genomes_project 7 26519152 26523264 + MGP_LPJ_P0082273 Hipk4 protein_coding protein_coding MGP_LPJ_T0099706.1 MGP_LPJ_G0037969.1 mouse_genomes_project 7 46179787 46179889 - Gm23585 snRNA snRNA MGP_LPJ_T0081235.1 MGP_LPJ_G0031480.1 mouse_genomes_project 7 2076107 2079087 + MGP_LPJ_P0081235 Zfp524 protein_coding protein_coding MGP_LPJ_T0082672.1 MGP_LPJ_G0031917.1 mouse_genomes_project 7 29629449 29631168 + MGP_LPJ_P0082672 E130208F15Rik protein_coding protein_coding MGP_LPJ_T0087337.1 MGP_LPJ_G0033142.1 mouse_genomes_project 7 148075560 148086996 + MGP_LPJ_P0087337 Taldo1 protein_coding protein_coding MGP_LPJ_T0087338.1 MGP_LPJ_G0033142.1 mouse_genomes_project 7 148075604 148083151 + Taldo1 protein_coding retained_intron MGP_LPJ_T0087339.1 MGP_LPJ_G0033142.1 mouse_genomes_project 7 148084181 148086234 + Taldo1 protein_coding retained_intron MGP_LPJ_T0085274.1 MGP_LPJ_G0032577.1 mouse_genomes_project 7 108098054 108099011 + MGP_LPJ_P0085274 Olfr618 protein_coding protein_coding MGP_LPJ_T0102399.1 MGP_LPJ_G0040435.1 mouse_genomes_project 7 49503056 49504019 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008808.1 MGP_LPJ_G0007114.1 mouse_genomes_project 7 287813 302865 - Gm44257 lincRNA lincRNA MGP_LPJ_T0008906.1 MGP_LPJ_G0007193.1 mouse_genomes_project 7 70784443 70792918 - Gm16157 lincRNA lincRNA MGP_LPJ_T0008907.1 MGP_LPJ_G0007193.1 mouse_genomes_project 7 70785056 70794401 - Gm16157 lincRNA lincRNA MGP_LPJ_T0085381.1 MGP_LPJ_G0032653.1 mouse_genomes_project 7 109764478 109765633 - MGP_LPJ_P0085381 protein_coding protein_coding MGP_LPJ_T0009030.1 MGP_LPJ_G0007272.1 mouse_genomes_project 7 131085775 131086896 - Gm44766 lincRNA lincRNA MGP_LPJ_T0082162.1 MGP_LPJ_G0031790.1 mouse_genomes_project 7 25267148 25313317 + MGP_LPJ_P0082162 Nlrp4a protein_coding protein_coding MGP_LPJ_T0082163.1 MGP_LPJ_G0031790.1 mouse_genomes_project 7 25267649 25312377 + MGP_LPJ_P0082163 Nlrp4a protein_coding protein_coding MGP_LPJ_T0082164.1 MGP_LPJ_G0031790.1 mouse_genomes_project 7 25267681 25285247 + Nlrp4a protein_coding processed_transcript MGP_LPJ_T0082165.1 MGP_LPJ_G0031790.1 mouse_genomes_project 7 25267681 25300461 + MGP_LPJ_P0082165 Nlrp4a protein_coding protein_coding MGP_LPJ_T0102382.1 MGP_LPJ_G0040418.1 mouse_genomes_project 7 44933857 44954464 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0082800.1 MGP_LPJ_G0031947.1 mouse_genomes_project 7 30120764 30125563 + Krtdap protein_coding retained_intron MGP_LPJ_T0082801.1 MGP_LPJ_G0031947.1 mouse_genomes_project 7 30120773 30126904 + MGP_LPJ_P0082801 Krtdap protein_coding protein_coding MGP_LPJ_T0082802.1 MGP_LPJ_G0031947.1 mouse_genomes_project 7 30120773 30126920 + MGP_LPJ_P0082802 Krtdap protein_coding protein_coding MGP_LPJ_T0082803.1 MGP_LPJ_G0031947.1 mouse_genomes_project 7 30120773 30126926 + MGP_LPJ_P0082803 Krtdap protein_coding protein_coding MGP_LPJ_T0082804.1 MGP_LPJ_G0031947.1 mouse_genomes_project 7 30120773 30126934 + MGP_LPJ_P0082804 Krtdap protein_coding protein_coding MGP_LPJ_T0082805.1 MGP_LPJ_G0031947.1 mouse_genomes_project 7 30120773 30126922 + MGP_LPJ_P0082805 Krtdap protein_coding protein_coding MGP_LPJ_T0082806.1 MGP_LPJ_G0031947.1 mouse_genomes_project 7 30125601 30126922 + Krtdap protein_coding retained_intron MGP_LPJ_T0082807.1 MGP_LPJ_G0031947.1 mouse_genomes_project 7 30125653 30126920 + Krtdap protein_coding retained_intron MGP_LPJ_T0082808.1 MGP_LPJ_G0031947.1 mouse_genomes_project 7 30126276 30126922 + Krtdap protein_coding retained_intron MGP_LPJ_T0081257.1 MGP_LPJ_G0031494.1 mouse_genomes_project 7 2430250 2441693 + MGP_LPJ_P0081257 Gm5065 protein_coding protein_coding MGP_LPJ_T0102339.1 MGP_LPJ_G0040375.1 mouse_genomes_project 7 25579127 25586386 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0010896.1 MGP_LPJ_G0009014.1 mouse_genomes_project 7 56006179 56006366 - Gm25956 miRNA miRNA MGP_LPJ_T0083739.1 MGP_LPJ_G0032174.1 mouse_genomes_project 7 47765962 47797173 - MGP_LPJ_P0083739 Saal1 protein_coding protein_coding MGP_LPJ_T0083740.1 MGP_LPJ_G0032174.1 mouse_genomes_project 7 47769123 47795409 - Saal1 protein_coding retained_intron MGP_LPJ_T0083741.1 MGP_LPJ_G0032174.1 mouse_genomes_project 7 47769158 47797134 - Saal1 protein_coding retained_intron MGP_LPJ_T0083742.1 MGP_LPJ_G0032174.1 mouse_genomes_project 7 47769160 47769752 - Saal1 protein_coding processed_transcript MGP_LPJ_T0083743.1 MGP_LPJ_G0032174.1 mouse_genomes_project 7 47775714 47797151 - Saal1 protein_coding retained_intron MGP_LPJ_T0083744.1 MGP_LPJ_G0032174.1 mouse_genomes_project 7 47776136 47797154 - Saal1 protein_coding retained_intron MGP_LPJ_T0083783.1 MGP_LPJ_G0032184.1 mouse_genomes_project 7 48043918 48082309 - MGP_LPJ_P0083783 Uevld protein_coding protein_coding MGP_LPJ_T0087598.1 MGP_LPJ_G0033187.1 mouse_genomes_project 7 149906063 149949221 + MGP_LPJ_P0087598 Kcnq1 protein_coding protein_coding MGP_LPJ_T0087599.1 MGP_LPJ_G0033187.1 mouse_genomes_project 7 149906216 149949221 + MGP_LPJ_P0087599 Kcnq1 protein_coding protein_coding MGP_LPJ_T0087600.1 MGP_LPJ_G0033187.1 mouse_genomes_project 7 149906446 149949221 + MGP_LPJ_P0087600 Kcnq1 protein_coding protein_coding MGP_LPJ_T0087601.1 MGP_LPJ_G0033187.1 mouse_genomes_project 7 149906955 150247978 + MGP_LPJ_P0087601 Kcnq1 protein_coding protein_coding MGP_LPJ_T0087602.1 MGP_LPJ_G0033187.1 mouse_genomes_project 7 149907252 150247061 + MGP_LPJ_P0087602 Kcnq1 protein_coding protein_coding MGP_LPJ_T0087603.1 MGP_LPJ_G0033187.1 mouse_genomes_project 7 149908052 149949221 + MGP_LPJ_P0087603 Kcnq1 protein_coding protein_coding MGP_LPJ_T0087604.1 MGP_LPJ_G0033187.1 mouse_genomes_project 7 149908895 149949221 + MGP_LPJ_P0087604 Kcnq1 protein_coding protein_coding MGP_LPJ_T0086082.1 MGP_LPJ_G0032872.1 mouse_genomes_project 7 127736168 127740150 + MGP_LPJ_P0086082 Chp2 protein_coding protein_coding MGP_LPJ_T0086083.1 MGP_LPJ_G0032872.1 mouse_genomes_project 7 127738898 127739509 + Chp2 protein_coding processed_transcript MGP_LPJ_T0080995.1 MGP_LPJ_G0031432.1 mouse_genomes_project 7 598868 613283 - MGP_LPJ_P0080995 Tmc4 protein_coding protein_coding MGP_LPJ_T0080996.1 MGP_LPJ_G0031432.1 mouse_genomes_project 7 598876 599969 - MGP_LPJ_P0080996 Tmc4 protein_coding protein_coding MGP_LPJ_T0080997.1 MGP_LPJ_G0031432.1 mouse_genomes_project 7 599043 605678 - Tmc4 protein_coding retained_intron MGP_LPJ_T0080998.1 MGP_LPJ_G0031432.1 mouse_genomes_project 7 605772 612432 - Tmc4 protein_coding retained_intron MGP_LPJ_T0080999.1 MGP_LPJ_G0031432.1 mouse_genomes_project 7 605886 613329 - Tmc4 protein_coding retained_intron MGP_LPJ_T0081000.1 MGP_LPJ_G0031432.1 mouse_genomes_project 7 610975 613289 - Tmc4 protein_coding retained_intron MGP_LPJ_T0010885.1 MGP_LPJ_G0009003.1 mouse_genomes_project 7 45323334 45323399 + Mir7052 miRNA miRNA MGP_LPJ_T0002324.1 MGP_LPJ_G0002232.1 mouse_genomes_project 7 127994941 127997664 + TEC TEC MGP_LPJ_T0015733.1 MGP_LPJ_G0013824.1 mouse_genomes_project 7 41867961 41869797 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015655.1 MGP_LPJ_G0013746.1 mouse_genomes_project 7 3745588 3746614 - processed_pseudogene processed_pseudogene MGP_LPJ_T0081483.1 MGP_LPJ_G0031594.1 mouse_genomes_project 7 13828985 13834020 - MGP_LPJ_P0081483 protein_coding protein_coding MGP_LPJ_T0085568.1 MGP_LPJ_G0032745.1 mouse_genomes_project 7 113637866 113638811 + MGP_LPJ_P0085568 Olfr510 protein_coding protein_coding MGP_LPJ_T0081084.1 MGP_LPJ_G0031446.1 mouse_genomes_project 7 1237103 1242792 + MGP_LPJ_P0081084 Lilra5 protein_coding protein_coding MGP_LPJ_T0082324.1 MGP_LPJ_G0031832.1 mouse_genomes_project 7 27106530 27114925 - MGP_LPJ_P0082324 Psmc4 protein_coding protein_coding MGP_LPJ_T0082325.1 MGP_LPJ_G0031832.1 mouse_genomes_project 7 27106539 27111846 - Psmc4 protein_coding retained_intron MGP_LPJ_T0082326.1 MGP_LPJ_G0031832.1 mouse_genomes_project 7 27106540 27114880 - Psmc4 protein_coding retained_intron MGP_LPJ_T0082327.1 MGP_LPJ_G0031832.1 mouse_genomes_project 7 27107411 27112173 - Psmc4 protein_coding retained_intron MGP_LPJ_T0082328.1 MGP_LPJ_G0031832.1 mouse_genomes_project 7 27107488 27112342 - Psmc4 protein_coding processed_transcript MGP_LPJ_T0082329.1 MGP_LPJ_G0031832.1 mouse_genomes_project 7 27112080 27114880 - Psmc4 protein_coding retained_intron MGP_LPJ_T0099704.1 MGP_LPJ_G0037967.1 mouse_genomes_project 7 39650224 39650335 + Gm26327 snRNA snRNA MGP_LPJ_T0082097.1 MGP_LPJ_G0031774.1 mouse_genomes_project 7 24410422 24412194 + MGP_LPJ_P0082097 B3gnt8 protein_coding protein_coding MGP_LPJ_T0082098.1 MGP_LPJ_G0031774.1 mouse_genomes_project 7 24411405 24418869 + MGP_LPJ_P0082098 B3gnt8 protein_coding nonsense_mediated_decay MGP_LPJ_T0082099.1 MGP_LPJ_G0031774.1 mouse_genomes_project 7 24411406 24413261 + MGP_LPJ_P0082099 B3gnt8 protein_coding protein_coding MGP_LPJ_T0082100.1 MGP_LPJ_G0031774.1 mouse_genomes_project 7 24411410 24413254 + B3gnt8 protein_coding retained_intron MGP_LPJ_T0087447.1 MGP_LPJ_G0033160.1 mouse_genomes_project 7 148644166 148694540 + MGP_LPJ_P0087447 Brsk2 protein_coding protein_coding MGP_LPJ_T0087448.1 MGP_LPJ_G0033160.1 mouse_genomes_project 7 148644166 148701841 + MGP_LPJ_P0087448 Brsk2 protein_coding protein_coding MGP_LPJ_T0087449.1 MGP_LPJ_G0033160.1 mouse_genomes_project 7 148644344 148700524 + MGP_LPJ_P0087449 Brsk2 protein_coding nonsense_mediated_decay MGP_LPJ_T0087450.1 MGP_LPJ_G0033160.1 mouse_genomes_project 7 148644420 148696485 + MGP_LPJ_P0087450 Brsk2 protein_coding protein_coding MGP_LPJ_T0087451.1 MGP_LPJ_G0033160.1 mouse_genomes_project 7 148644423 148699827 + MGP_LPJ_P0087451 Brsk2 protein_coding protein_coding MGP_LPJ_T0087452.1 MGP_LPJ_G0033160.1 mouse_genomes_project 7 148644423 148701848 + MGP_LPJ_P0087452 Brsk2 protein_coding unknown_likely_coding MGP_LPJ_T0087453.1 MGP_LPJ_G0033160.1 mouse_genomes_project 7 148644423 148701842 + MGP_LPJ_P0087453 Brsk2 protein_coding protein_coding MGP_LPJ_T0087454.1 MGP_LPJ_G0033160.1 mouse_genomes_project 7 148677071 148699742 + MGP_LPJ_P0087454 Brsk2 protein_coding nonsense_mediated_decay MGP_LPJ_T0087455.1 MGP_LPJ_G0033160.1 mouse_genomes_project 7 148680383 148699742 + MGP_LPJ_P0087455 Brsk2 protein_coding nonsense_mediated_decay MGP_LPJ_T0087456.1 MGP_LPJ_G0033160.1 mouse_genomes_project 7 148680423 148700766 + MGP_LPJ_P0087456 Brsk2 protein_coding nonsense_mediated_decay MGP_LPJ_T0087457.1 MGP_LPJ_G0033160.1 mouse_genomes_project 7 148681244 148699742 + MGP_LPJ_P0087457 Brsk2 protein_coding nonsense_mediated_decay MGP_LPJ_T0087458.1 MGP_LPJ_G0033160.1 mouse_genomes_project 7 148688688 148699745 + MGP_LPJ_P0087458 Brsk2 protein_coding protein_coding MGP_LPJ_T0087459.1 MGP_LPJ_G0033160.1 mouse_genomes_project 7 148688744 148700071 + MGP_LPJ_P0087459 Brsk2 protein_coding protein_coding MGP_LPJ_T0087460.1 MGP_LPJ_G0033160.1 mouse_genomes_project 7 148693004 148701662 + Brsk2 protein_coding processed_transcript MGP_LPJ_T0087461.1 MGP_LPJ_G0033160.1 mouse_genomes_project 7 148693032 148700270 + Brsk2 protein_coding processed_transcript MGP_LPJ_T0087462.1 MGP_LPJ_G0033160.1 mouse_genomes_project 7 148694195 148696976 + MGP_LPJ_P0087462 Brsk2 protein_coding protein_coding MGP_LPJ_T0085643.1 MGP_LPJ_G0032774.1 mouse_genomes_project 7 115324492 115641915 - MGP_LPJ_P0085643 Sbf2 protein_coding protein_coding MGP_LPJ_T0085644.1 MGP_LPJ_G0032774.1 mouse_genomes_project 7 115324501 115641913 - MGP_LPJ_P0085644 Sbf2 protein_coding protein_coding MGP_LPJ_T0085645.1 MGP_LPJ_G0032774.1 mouse_genomes_project 7 115325877 115641754 - MGP_LPJ_P0085645 Sbf2 protein_coding protein_coding MGP_LPJ_T0085646.1 MGP_LPJ_G0032774.1 mouse_genomes_project 7 115337176 115356996 - Sbf2 protein_coding retained_intron MGP_LPJ_T0085647.1 MGP_LPJ_G0032774.1 mouse_genomes_project 7 115346368 115380442 - MGP_LPJ_P0085647 Sbf2 protein_coding protein_coding MGP_LPJ_T0085648.1 MGP_LPJ_G0032774.1 mouse_genomes_project 7 115355894 115368711 - Sbf2 protein_coding retained_intron MGP_LPJ_T0085649.1 MGP_LPJ_G0032774.1 mouse_genomes_project 7 115358037 115382918 - MGP_LPJ_P0085649 Sbf2 protein_coding protein_coding MGP_LPJ_T0085650.1 MGP_LPJ_G0032774.1 mouse_genomes_project 7 115396666 115641907 - Sbf2 protein_coding retained_intron MGP_LPJ_T0085651.1 MGP_LPJ_G0032774.1 mouse_genomes_project 7 115396977 115641889 - Sbf2 protein_coding retained_intron MGP_LPJ_T0085652.1 MGP_LPJ_G0032774.1 mouse_genomes_project 7 115449531 115469596 - MGP_LPJ_P0085652 Sbf2 protein_coding protein_coding MGP_LPJ_T0085653.1 MGP_LPJ_G0032774.1 mouse_genomes_project 7 115452722 115641875 - Sbf2 protein_coding retained_intron MGP_LPJ_T0085654.1 MGP_LPJ_G0032774.1 mouse_genomes_project 7 115468589 115641898 - MGP_LPJ_P0085654 Sbf2 protein_coding protein_coding MGP_LPJ_T0085655.1 MGP_LPJ_G0032774.1 mouse_genomes_project 7 115468776 115491202 - MGP_LPJ_P0085655 Sbf2 protein_coding protein_coding MGP_LPJ_T0085656.1 MGP_LPJ_G0032774.1 mouse_genomes_project 7 115491145 115641754 - MGP_LPJ_P0085656 Sbf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0081480.1 MGP_LPJ_G0031593.1 mouse_genomes_project 7 13791728 13808798 + MGP_LPJ_P0081480 protein_coding protein_coding MGP_LPJ_T0081481.1 MGP_LPJ_G0031593.1 mouse_genomes_project 7 13791764 13808365 + MGP_LPJ_P0081481 protein_coding protein_coding MGP_LPJ_T0081482.1 MGP_LPJ_G0031593.1 mouse_genomes_project 7 13805551 13814681 + MGP_LPJ_P0081482 protein_coding protein_coding MGP_LPJ_T0084947.1 MGP_LPJ_G0032470.1 mouse_genomes_project 7 104299026 104341359 - MGP_LPJ_P0084947 Pold3 protein_coding protein_coding MGP_LPJ_T0084948.1 MGP_LPJ_G0032470.1 mouse_genomes_project 7 104300311 104341249 - MGP_LPJ_P0084948 Pold3 protein_coding nonsense_mediated_decay MGP_LPJ_T0084949.1 MGP_LPJ_G0032470.1 mouse_genomes_project 7 104300501 104311434 - Pold3 protein_coding retained_intron MGP_LPJ_T0084950.1 MGP_LPJ_G0032470.1 mouse_genomes_project 7 104300580 104307809 - Pold3 protein_coding retained_intron MGP_LPJ_T0084951.1 MGP_LPJ_G0032470.1 mouse_genomes_project 7 104314078 104318391 - Pold3 protein_coding retained_intron MGP_LPJ_T0084952.1 MGP_LPJ_G0032470.1 mouse_genomes_project 7 104316761 104318264 - Pold3 protein_coding retained_intron MGP_LPJ_T0084953.1 MGP_LPJ_G0032470.1 mouse_genomes_project 7 104317292 104341252 - Pold3 protein_coding processed_transcript MGP_LPJ_T0084954.1 MGP_LPJ_G0032470.1 mouse_genomes_project 7 104332062 104339717 - Pold3 protein_coding processed_transcript MGP_LPJ_T0083747.1 MGP_LPJ_G0032177.1 mouse_genomes_project 7 47849477 47852207 + MGP_LPJ_P0083747 Saa1 protein_coding protein_coding MGP_LPJ_T0082608.1 MGP_LPJ_G0031905.1 mouse_genomes_project 7 29466605 29480458 + MGP_LPJ_P0082608 Gm5113 protein_coding protein_coding MGP_LPJ_T0101409.1 MGP_LPJ_G0039586.1 mouse_genomes_project 7 134212585 134242573 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101410.1 MGP_LPJ_G0039586.1 mouse_genomes_project 7 134242234 134242429 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0081456.1 MGP_LPJ_G0031579.1 mouse_genomes_project 7 11637018 11698203 - MGP_LPJ_P0081456 protein_coding protein_coding MGP_LPJ_T0084592.1 MGP_LPJ_G0032356.1 mouse_genomes_project 7 87046999 87059647 - Il16 protein_coding retained_intron MGP_LPJ_T0084593.1 MGP_LPJ_G0032356.1 mouse_genomes_project 7 87047215 87154473 - MGP_LPJ_P0084593 Il16 protein_coding protein_coding MGP_LPJ_T0084594.1 MGP_LPJ_G0032356.1 mouse_genomes_project 7 87053722 87059477 - Il16 protein_coding retained_intron MGP_LPJ_T0084595.1 MGP_LPJ_G0032356.1 mouse_genomes_project 7 87065096 87165123 - MGP_LPJ_P0084595 Il16 protein_coding nonsense_mediated_decay MGP_LPJ_T0084596.1 MGP_LPJ_G0032356.1 mouse_genomes_project 7 87141449 87151345 - MGP_LPJ_P0084596 Il16 protein_coding protein_coding MGP_LPJ_T0084597.1 MGP_LPJ_G0032356.1 mouse_genomes_project 7 87141449 87159311 - MGP_LPJ_P0084597 Il16 protein_coding protein_coding MGP_LPJ_T0015773.1 MGP_LPJ_G0013864.1 mouse_genomes_project 7 66162540 66162800 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010932.1 MGP_LPJ_G0009050.1 mouse_genomes_project 7 105775726 105775794 + Mir139 miRNA miRNA MGP_LPJ_T0080994.1 MGP_LPJ_G0031431.1 mouse_genomes_project 7 592266 598533 - MGP_LPJ_P0080994 Leng1 protein_coding unknown_likely_coding MGP_LPJ_T0084227.1 MGP_LPJ_G0032284.1 mouse_genomes_project 7 81855020 81862869 - MGP_LPJ_P0084227 Mrpl46 protein_coding protein_coding MGP_LPJ_T0084228.1 MGP_LPJ_G0032284.1 mouse_genomes_project 7 81855384 81863311 - Mrpl46 protein_coding processed_transcript MGP_LPJ_T0082305.1 MGP_LPJ_G0031823.1 mouse_genomes_project 7 26678147 26696339 - MGP_LPJ_P0082305 Map3k10 protein_coding protein_coding MGP_LPJ_T0082306.1 MGP_LPJ_G0031823.1 mouse_genomes_project 7 26678436 26696343 - MGP_LPJ_P0082306 Map3k10 protein_coding protein_coding MGP_LPJ_T0082307.1 MGP_LPJ_G0031823.1 mouse_genomes_project 7 26685920 26686870 - Map3k10 protein_coding retained_intron MGP_LPJ_T0082308.1 MGP_LPJ_G0031823.1 mouse_genomes_project 7 26685942 26696102 - Map3k10 protein_coding retained_intron MGP_LPJ_T0082309.1 MGP_LPJ_G0031823.1 mouse_genomes_project 7 26689910 26696326 - MGP_LPJ_P0082309 Map3k10 protein_coding protein_coding MGP_LPJ_T0085178.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106556443 106571130 + Pgap2 protein_coding processed_transcript MGP_LPJ_T0085179.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106556570 106575468 + MGP_LPJ_P0085179 Pgap2 protein_coding protein_coding MGP_LPJ_T0085180.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106556594 106589691 + MGP_LPJ_P0085180 Pgap2 protein_coding protein_coding MGP_LPJ_T0085181.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106556604 106575528 + MGP_LPJ_P0085181 Pgap2 protein_coding protein_coding MGP_LPJ_T0085182.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106556756 106568798 + Pgap2 protein_coding processed_transcript MGP_LPJ_T0085183.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106556767 106587586 + Pgap2 protein_coding retained_intron MGP_LPJ_T0085184.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106570086 106587292 + MGP_LPJ_P0085184 Pgap2 protein_coding protein_coding MGP_LPJ_T0085185.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106570290 106588353 + MGP_LPJ_P0085185 Pgap2 protein_coding protein_coding MGP_LPJ_T0085186.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106570674 106589691 + MGP_LPJ_P0085186 Pgap2 protein_coding protein_coding MGP_LPJ_T0085187.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106570691 106588351 + MGP_LPJ_P0085187 Pgap2 protein_coding protein_coding MGP_LPJ_T0085188.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106570696 106588901 + MGP_LPJ_P0085188 Pgap2 protein_coding nonsense_mediated_decay MGP_LPJ_T0085189.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106570699 106587358 + MGP_LPJ_P0085189 Pgap2 protein_coding protein_coding MGP_LPJ_T0085190.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106570715 106588887 + MGP_LPJ_P0085190 Pgap2 protein_coding protein_coding MGP_LPJ_T0085191.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106570717 106576194 + Pgap2 protein_coding retained_intron MGP_LPJ_T0085192.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106570718 106588787 + Pgap2 protein_coding processed_transcript MGP_LPJ_T0085193.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106570721 106575437 + MGP_LPJ_P0085193 Pgap2 protein_coding protein_coding MGP_LPJ_T0085194.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106570724 106587543 + Pgap2 protein_coding retained_intron MGP_LPJ_T0085195.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106570730 106588745 + MGP_LPJ_P0085195 Pgap2 protein_coding nonsense_mediated_decay MGP_LPJ_T0085196.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106570731 106588858 + MGP_LPJ_P0085196 Pgap2 protein_coding nonsense_mediated_decay MGP_LPJ_T0085197.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106570739 106589684 + Pgap2 protein_coding processed_transcript MGP_LPJ_T0085198.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106570928 106587423 + MGP_LPJ_P0085198 Pgap2 protein_coding protein_coding MGP_LPJ_T0085199.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106574900 106587460 + MGP_LPJ_P0085199 Pgap2 protein_coding protein_coding MGP_LPJ_T0085200.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106574913 106588677 + MGP_LPJ_P0085200 Pgap2 protein_coding nonsense_mediated_decay MGP_LPJ_T0085201.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106581114 106589684 + MGP_LPJ_P0085201 Pgap2 protein_coding protein_coding MGP_LPJ_T0085202.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106586978 106588655 + MGP_LPJ_P0085202 Pgap2 protein_coding protein_coding MGP_LPJ_T0085203.1 MGP_LPJ_G0032513.1 mouse_genomes_project 7 106587027 106588779 + Pgap2 protein_coding retained_intron MGP_LPJ_T0009021.1 MGP_LPJ_G0007266.1 mouse_genomes_project 7 127082901 127084590 + 1700025J12Rik lincRNA lincRNA MGP_LPJ_T0102438.1 MGP_LPJ_G0040474.1 mouse_genomes_project 7 93400634 93400847 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0005312.1 MGP_LPJ_G0004505.1 mouse_genomes_project 7 127491051 127498377 + Gm44987 antisense antisense MGP_LPJ_T0086177.1 MGP_LPJ_G0032889.1 mouse_genomes_project 7 131570715 131774557 - MGP_LPJ_P0086177 Gsg1l protein_coding protein_coding MGP_LPJ_T0084789.1 MGP_LPJ_G0032432.1 mouse_genomes_project 7 101432634 101437386 - MGP_LPJ_P0084789 Thrsp protein_coding protein_coding MGP_LPJ_T0084790.1 MGP_LPJ_G0032432.1 mouse_genomes_project 7 101435806 101437175 - Thrsp protein_coding retained_intron MGP_LPJ_T0015786.1 MGP_LPJ_G0013877.1 mouse_genomes_project 7 76503898 76504264 - processed_pseudogene processed_pseudogene MGP_LPJ_T0086453.1 MGP_LPJ_G0032931.1 mouse_genomes_project 7 132799799 132802119 - MGP_LPJ_P0086453 protein_coding protein_coding MGP_LPJ_T0086456.1 MGP_LPJ_G0032931.1 mouse_genomes_project 7 132799941 132802087 - MGP_LPJ_P0086456 protein_coding protein_coding MGP_LPJ_T0086457.1 MGP_LPJ_G0032931.1 mouse_genomes_project 7 132800143 132801447 - MGP_LPJ_P0086457 protein_coding protein_coding MGP_LPJ_T0086458.1 MGP_LPJ_G0032931.1 mouse_genomes_project 7 132800172 132802084 - MGP_LPJ_P0086458 protein_coding protein_coding MGP_LPJ_T0005243.1 MGP_LPJ_G0004459.1 mouse_genomes_project 7 52156937 52211883 - Nell1os antisense antisense MGP_LPJ_T0005244.1 MGP_LPJ_G0004459.1 mouse_genomes_project 7 52183005 52211970 - Nell1os antisense antisense MGP_LPJ_T0005245.1 MGP_LPJ_G0004459.1 mouse_genomes_project 7 52197256 52207795 - Nell1os antisense antisense MGP_LPJ_T0083234.1 MGP_LPJ_G0032038.1 mouse_genomes_project 7 44410182 44419177 - MGP_LPJ_P0083234 Siglece protein_coding protein_coding MGP_LPJ_T0083235.1 MGP_LPJ_G0032038.1 mouse_genomes_project 7 44410653 44418372 - MGP_LPJ_P0083235 Siglece protein_coding protein_coding MGP_LPJ_T0005264.1 MGP_LPJ_G0004474.1 mouse_genomes_project 7 83246163 83258310 - Gm21057 antisense antisense MGP_LPJ_T0005265.1 MGP_LPJ_G0004474.1 mouse_genomes_project 7 83256829 83258330 - Gm21057 antisense antisense MGP_LPJ_T0102306.1 MGP_LPJ_G0040343.1 mouse_genomes_project 7 9406553 9407798 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0102361.1 MGP_LPJ_G0040397.1 mouse_genomes_project 7 41044295 41057378 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0015748.1 MGP_LPJ_G0013839.1 mouse_genomes_project 7 44260462 44261014 + processed_pseudogene processed_pseudogene MGP_LPJ_T0081216.1 MGP_LPJ_G0031472.1 mouse_genomes_project 7 1928807 1949534 + MGP_LPJ_P0081216 Isoc2a protein_coding protein_coding MGP_LPJ_T0085022.1 MGP_LPJ_G0032485.1 mouse_genomes_project 7 105103243 105119971 - MGP_LPJ_P0085022 Relt protein_coding nonsense_mediated_decay MGP_LPJ_T0085023.1 MGP_LPJ_G0032485.1 mouse_genomes_project 7 105103807 105109692 - MGP_LPJ_P0085023 Relt protein_coding protein_coding MGP_LPJ_T0085024.1 MGP_LPJ_G0032485.1 mouse_genomes_project 7 105107688 105112006 - MGP_LPJ_P0085024 Relt protein_coding protein_coding MGP_LPJ_T0085025.1 MGP_LPJ_G0032485.1 mouse_genomes_project 7 105107688 105112879 - MGP_LPJ_P0085025 Relt protein_coding protein_coding MGP_LPJ_T0085026.1 MGP_LPJ_G0032485.1 mouse_genomes_project 7 105107698 105119723 - MGP_LPJ_P0085026 Relt protein_coding protein_coding MGP_LPJ_T0085027.1 MGP_LPJ_G0032485.1 mouse_genomes_project 7 105109633 105119963 - MGP_LPJ_P0085027 Relt protein_coding protein_coding MGP_LPJ_T0083478.1 MGP_LPJ_G0032109.1 mouse_genomes_project 7 46047720 46054397 - MGP_LPJ_P0083478 protein_coding protein_coding MGP_LPJ_T0085513.1 MGP_LPJ_G0032697.1 mouse_genomes_project 7 111906014 111910524 - MGP_LPJ_P0085513 Olfr710 protein_coding protein_coding MGP_LPJ_T0086859.1 MGP_LPJ_G0033007.1 mouse_genomes_project 7 136392675 136521988 - MGP_LPJ_P0086859 Ate1 protein_coding unknown_likely_coding MGP_LPJ_T0086860.1 MGP_LPJ_G0033007.1 mouse_genomes_project 7 136392715 136522057 - MGP_LPJ_P0086860 Ate1 protein_coding protein_coding MGP_LPJ_T0086861.1 MGP_LPJ_G0033007.1 mouse_genomes_project 7 136392715 136522066 - MGP_LPJ_P0086861 Ate1 protein_coding protein_coding MGP_LPJ_T0086862.1 MGP_LPJ_G0033007.1 mouse_genomes_project 7 136395747 136522488 - MGP_LPJ_P0086862 Ate1 protein_coding protein_coding MGP_LPJ_T0086863.1 MGP_LPJ_G0033007.1 mouse_genomes_project 7 136395747 136522488 - MGP_LPJ_P0086863 Ate1 protein_coding protein_coding MGP_LPJ_T0084076.1 MGP_LPJ_G0032257.1 mouse_genomes_project 7 68806288 68828094 + MGP_LPJ_P0084076 Gm10974 protein_coding protein_coding MGP_LPJ_T0081334.1 MGP_LPJ_G0031533.1 mouse_genomes_project 7 8082599 8084636 - MGP_LPJ_P0081334 Vmn1r71 protein_coding protein_coding MGP_LPJ_T0083080.1 MGP_LPJ_G0031996.1 mouse_genomes_project 7 35433929 35505252 - MGP_LPJ_P0083080 Dpy19l3 protein_coding protein_coding MGP_LPJ_T0083081.1 MGP_LPJ_G0031996.1 mouse_genomes_project 7 35439517 35457863 - MGP_LPJ_P0083081 Dpy19l3 protein_coding nonsense_mediated_decay MGP_LPJ_T0083082.1 MGP_LPJ_G0031996.1 mouse_genomes_project 7 35456988 35458349 - Dpy19l3 protein_coding retained_intron MGP_LPJ_T0083083.1 MGP_LPJ_G0031996.1 mouse_genomes_project 7 35457394 35458435 - Dpy19l3 protein_coding retained_intron MGP_LPJ_T0083084.1 MGP_LPJ_G0031996.1 mouse_genomes_project 7 35463989 35479717 - MGP_LPJ_P0083084 Dpy19l3 protein_coding nonsense_mediated_decay MGP_LPJ_T0083085.1 MGP_LPJ_G0031996.1 mouse_genomes_project 7 35465807 35473690 - Dpy19l3 protein_coding retained_intron MGP_LPJ_T0083086.1 MGP_LPJ_G0031996.1 mouse_genomes_project 7 35469446 35475485 - Dpy19l3 protein_coding processed_transcript MGP_LPJ_T0083087.1 MGP_LPJ_G0031996.1 mouse_genomes_project 7 35475499 35479761 - Dpy19l3 protein_coding retained_intron MGP_LPJ_T0083088.1 MGP_LPJ_G0031996.1 mouse_genomes_project 7 35479662 35505197 - Dpy19l3 protein_coding processed_transcript MGP_LPJ_T0083089.1 MGP_LPJ_G0031996.1 mouse_genomes_project 7 35502103 35505153 - Dpy19l3 protein_coding retained_intron MGP_LPJ_T0015767.1 MGP_LPJ_G0013858.1 mouse_genomes_project 7 58786539 58787142 + processed_pseudogene processed_pseudogene MGP_LPJ_T0086143.1 MGP_LPJ_G0032881.1 mouse_genomes_project 7 129053217 129078529 - MGP_LPJ_P0086143 Zkscan2 protein_coding protein_coding MGP_LPJ_T0086144.1 MGP_LPJ_G0032881.1 mouse_genomes_project 7 129055577 129058763 - Zkscan2 protein_coding retained_intron MGP_LPJ_T0086145.1 MGP_LPJ_G0032881.1 mouse_genomes_project 7 129057975 129062776 - MGP_LPJ_P0086145 Zkscan2 protein_coding protein_coding MGP_LPJ_T0086146.1 MGP_LPJ_G0032881.1 mouse_genomes_project 7 129072305 129078529 - MGP_LPJ_P0086146 Zkscan2 protein_coding protein_coding MGP_LPJ_T0086150.1 MGP_LPJ_G0032884.1 mouse_genomes_project 7 131140432 131167359 - MGP_LPJ_P0086150 Nsmce1 protein_coding protein_coding MGP_LPJ_T0086151.1 MGP_LPJ_G0032884.1 mouse_genomes_project 7 131143901 131167162 - MGP_LPJ_P0086151 Nsmce1 protein_coding protein_coding MGP_LPJ_T0086152.1 MGP_LPJ_G0032884.1 mouse_genomes_project 7 131143955 131151350 - Nsmce1 protein_coding processed_transcript MGP_LPJ_T0100996.1 MGP_LPJ_G0039259.1 mouse_genomes_project 7 124674601 124674727 - Gm23321 snoRNA snoRNA MGP_LPJ_T0010937.1 MGP_LPJ_G0009055.1 mouse_genomes_project 7 118819378 118819480 - Gm23700 miRNA miRNA MGP_LPJ_T0010866.1 MGP_LPJ_G0008984.1 mouse_genomes_project 7 23836450 23836560 - Mir6537 miRNA miRNA MGP_LPJ_T0008830.1 MGP_LPJ_G0007133.1 mouse_genomes_project 7 24360850 24362158 - lincRNA lincRNA MGP_LPJ_T0008831.1 MGP_LPJ_G0007133.1 mouse_genomes_project 7 24360851 24362158 - lincRNA lincRNA MGP_LPJ_T0082673.1 MGP_LPJ_G0031918.1 mouse_genomes_project 7 29666008 29673290 - MGP_LPJ_P0082673 Lrfn3 protein_coding protein_coding MGP_LPJ_T0085247.1 MGP_LPJ_G0032553.1 mouse_genomes_project 7 107535859 107536813 - MGP_LPJ_P0085247 Olfr586 protein_coding protein_coding MGP_LPJ_T0081863.1 MGP_LPJ_G0031709.1 mouse_genomes_project 7 22039070 22039968 - MGP_LPJ_P0081863 protein_coding protein_coding MGP_LPJ_T0081322.1 MGP_LPJ_G0031525.1 mouse_genomes_project 7 7409572 7423890 - MGP_LPJ_P0081322 protein_coding protein_coding MGP_LPJ_T0102391.1 MGP_LPJ_G0040427.1 mouse_genomes_project 7 48882089 49458441 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0082942.1 MGP_LPJ_G0031971.1 mouse_genomes_project 7 33619445 33624279 + MGP_LPJ_P0082942 Scgb1b30 protein_coding protein_coding MGP_LPJ_T0084082.1 MGP_LPJ_G0032259.1 mouse_genomes_project 7 69095089 69139980 - MGP_LPJ_P0084082 Asb7 protein_coding protein_coding MGP_LPJ_T0084083.1 MGP_LPJ_G0032259.1 mouse_genomes_project 7 69095089 69139263 - MGP_LPJ_P0084083 Asb7 protein_coding nonsense_mediated_decay MGP_LPJ_T0084084.1 MGP_LPJ_G0032259.1 mouse_genomes_project 7 69127518 69139858 - MGP_LPJ_P0084084 Asb7 protein_coding protein_coding MGP_LPJ_T0018327.1 MGP_LPJ_G0015591.1 mouse_genomes_project 7 66240510 66245477 + Gm27252 processed_transcript lincRNA MGP_LPJ_T0018328.1 MGP_LPJ_G0015591.1 mouse_genomes_project 7 66243752 66245308 + Gm27252 processed_transcript antisense MGP_LPJ_T0010874.1 MGP_LPJ_G0008992.1 mouse_genomes_project 7 28275271 28275330 - Mir1963 miRNA miRNA MGP_LPJ_T0008818.1 MGP_LPJ_G0007123.1 mouse_genomes_project 7 14868976 14875091 - lincRNA lincRNA MGP_LPJ_T0008819.1 MGP_LPJ_G0007123.1 mouse_genomes_project 7 14873158 14875091 - lincRNA lincRNA MGP_LPJ_T0102291.1 MGP_LPJ_G0040328.1 mouse_genomes_project 7 7597028 7597935 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0087414.1 MGP_LPJ_G0033152.1 mouse_genomes_project 7 148161002 148178779 + MGP_LPJ_P0087414 Tspan4 protein_coding protein_coding MGP_LPJ_T0087415.1 MGP_LPJ_G0033152.1 mouse_genomes_project 7 148161005 148178792 + MGP_LPJ_P0087415 Tspan4 protein_coding protein_coding MGP_LPJ_T0087416.1 MGP_LPJ_G0033152.1 mouse_genomes_project 7 148161228 148176596 + MGP_LPJ_P0087416 Tspan4 protein_coding protein_coding MGP_LPJ_T0087417.1 MGP_LPJ_G0033152.1 mouse_genomes_project 7 148167643 148179929 + MGP_LPJ_P0087417 Tspan4 protein_coding protein_coding MGP_LPJ_T0087418.1 MGP_LPJ_G0033152.1 mouse_genomes_project 7 148178464 148179936 + Tspan4 protein_coding retained_intron MGP_LPJ_T0015781.1 MGP_LPJ_G0013872.1 mouse_genomes_project 7 72187663 72188662 - processed_pseudogene processed_pseudogene MGP_LPJ_T0082681.1 MGP_LPJ_G0031923.1 mouse_genomes_project 7 29755208 29764995 - Kirrel2 protein_coding retained_intron MGP_LPJ_T0082682.1 MGP_LPJ_G0031923.1 mouse_genomes_project 7 29755210 29764876 - MGP_LPJ_P0082682 Kirrel2 protein_coding protein_coding MGP_LPJ_T0082683.1 MGP_LPJ_G0031923.1 mouse_genomes_project 7 29755742 29758512 - MGP_LPJ_P0082683 Kirrel2 protein_coding protein_coding MGP_LPJ_T0082684.1 MGP_LPJ_G0031923.1 mouse_genomes_project 7 29755790 29764195 - MGP_LPJ_P0082684 Kirrel2 protein_coding protein_coding MGP_LPJ_T0082685.1 MGP_LPJ_G0031923.1 mouse_genomes_project 7 29764329 29765036 - Kirrel2 protein_coding processed_transcript MGP_LPJ_T0008903.1 MGP_LPJ_G0007190.1 mouse_genomes_project 7 68513737 68514309 - Gm45081 lincRNA lincRNA MGP_LPJ_T0083269.1 MGP_LPJ_G0032056.1 mouse_genomes_project 7 44802166 44933542 + MGP_LPJ_P0083269 protein_coding protein_coding MGP_LPJ_T0099707.1 MGP_LPJ_G0037970.1 mouse_genomes_project 7 46909054 46909139 - Gm22098 snRNA snRNA MGP_LPJ_T0084912.1 MGP_LPJ_G0032458.1 mouse_genomes_project 7 103579468 103587452 + MGP_LPJ_P0084912 Klhl35 protein_coding protein_coding MGP_LPJ_T0084913.1 MGP_LPJ_G0032458.1 mouse_genomes_project 7 103582395 103585216 + MGP_LPJ_P0084913 Klhl35 protein_coding nonsense_mediated_decay MGP_LPJ_T0084914.1 MGP_LPJ_G0032458.1 mouse_genomes_project 7 103583384 103585303 + Klhl35 protein_coding retained_intron MGP_LPJ_T0084915.1 MGP_LPJ_G0032458.1 mouse_genomes_project 7 103585255 103587034 + MGP_LPJ_P0084915 Klhl35 protein_coding protein_coding MGP_LPJ_T0101616.1 MGP_LPJ_G0039690.1 mouse_genomes_project 7 108893481 108895936 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101617.1 MGP_LPJ_G0039690.1 mouse_genomes_project 7 108894174 108895415 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0015706.1 MGP_LPJ_G0013797.1 mouse_genomes_project 7 29567992 29568385 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002235.1 MGP_LPJ_G0002144.1 mouse_genomes_project 7 36528927 36530087 + TEC TEC MGP_LPJ_T0083120.1 MGP_LPJ_G0032002.1 mouse_genomes_project 7 38086356 38100519 + MGP_LPJ_P0083120 protein_coding protein_coding MGP_LPJ_T0083121.1 MGP_LPJ_G0032002.1 mouse_genomes_project 7 38086379 38087039 + protein_coding processed_transcript MGP_LPJ_T0083122.1 MGP_LPJ_G0032002.1 mouse_genomes_project 7 38086400 38099545 + MGP_LPJ_P0083122 protein_coding protein_coding MGP_LPJ_T0083123.1 MGP_LPJ_G0032002.1 mouse_genomes_project 7 38086792 38100519 + MGP_LPJ_P0083123 protein_coding protein_coding MGP_LPJ_T0083124.1 MGP_LPJ_G0032002.1 mouse_genomes_project 7 38086987 38092071 + MGP_LPJ_P0083124 protein_coding protein_coding MGP_LPJ_T0083125.1 MGP_LPJ_G0032002.1 mouse_genomes_project 7 38087037 38097927 + MGP_LPJ_P0083125 protein_coding protein_coding MGP_LPJ_T0083126.1 MGP_LPJ_G0032002.1 mouse_genomes_project 7 38089403 38098219 + MGP_LPJ_P0083126 protein_coding protein_coding MGP_LPJ_T0081871.1 MGP_LPJ_G0031717.1 mouse_genomes_project 7 22524437 22525409 + MGP_LPJ_P0081871 Vmn1r179 protein_coding protein_coding MGP_LPJ_T0102318.1 MGP_LPJ_G0040355.1 mouse_genomes_project 7 11744987 11771648 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002328.1 MGP_LPJ_G0002236.1 mouse_genomes_project 7 130722786 130725249 - TEC TEC MGP_LPJ_T0015730.1 MGP_LPJ_G0013821.1 mouse_genomes_project 7 41537036 41538537 - processed_pseudogene processed_pseudogene MGP_LPJ_T0083799.1 MGP_LPJ_G0032194.1 mouse_genomes_project 7 49732214 49735748 - MGP_LPJ_P0083799 Mrgprb4 protein_coding protein_coding MGP_LPJ_T0083965.1 MGP_LPJ_G0032237.1 mouse_genomes_project 7 65770601 66098083 + MGP_LPJ_P0083965 Otud7a protein_coding protein_coding MGP_LPJ_T0083966.1 MGP_LPJ_G0032237.1 mouse_genomes_project 7 65770627 65952111 + Otud7a protein_coding processed_transcript MGP_LPJ_T0083967.1 MGP_LPJ_G0032237.1 mouse_genomes_project 7 65988179 66097044 + MGP_LPJ_P0083967 Otud7a protein_coding protein_coding MGP_LPJ_T0083968.1 MGP_LPJ_G0032237.1 mouse_genomes_project 7 66021934 66097786 + MGP_LPJ_P0083968 Otud7a protein_coding unknown_likely_coding MGP_LPJ_T0083969.1 MGP_LPJ_G0032237.1 mouse_genomes_project 7 66093766 66096980 + MGP_LPJ_P0083969 Otud7a protein_coding protein_coding MGP_LPJ_T0102387.1 MGP_LPJ_G0040423.1 mouse_genomes_project 7 48420850 48421768 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008853.1 MGP_LPJ_G0007154.1 mouse_genomes_project 7 35865332 35868473 + Gm45143 lincRNA lincRNA MGP_LPJ_T0086004.1 MGP_LPJ_G0032851.1 mouse_genomes_project 7 126293858 126362706 + MGP_LPJ_P0086004 Eef2k protein_coding protein_coding MGP_LPJ_T0086005.1 MGP_LPJ_G0032851.1 mouse_genomes_project 7 126294627 126359481 + MGP_LPJ_P0086005 Eef2k protein_coding protein_coding MGP_LPJ_T0086006.1 MGP_LPJ_G0032851.1 mouse_genomes_project 7 126294645 126309435 + MGP_LPJ_P0086006 Eef2k protein_coding protein_coding MGP_LPJ_T0086007.1 MGP_LPJ_G0032851.1 mouse_genomes_project 7 126302189 126354779 + MGP_LPJ_P0086007 Eef2k protein_coding protein_coding MGP_LPJ_T0086008.1 MGP_LPJ_G0032851.1 mouse_genomes_project 7 126302189 126334763 + MGP_LPJ_P0086008 Eef2k protein_coding protein_coding MGP_LPJ_T0086009.1 MGP_LPJ_G0032851.1 mouse_genomes_project 7 126302201 126358983 + MGP_LPJ_P0086009 Eef2k protein_coding protein_coding MGP_LPJ_T0086010.1 MGP_LPJ_G0032851.1 mouse_genomes_project 7 126327953 126334282 + Eef2k protein_coding retained_intron MGP_LPJ_T0086011.1 MGP_LPJ_G0032851.1 mouse_genomes_project 7 126344106 126349725 + MGP_LPJ_P0086011 Eef2k protein_coding protein_coding MGP_LPJ_T0086012.1 MGP_LPJ_G0032851.1 mouse_genomes_project 7 126346273 126359065 + Eef2k protein_coding processed_transcript MGP_LPJ_T0015840.1 MGP_LPJ_G0013931.1 mouse_genomes_project 7 111314795 111315833 - processed_pseudogene processed_pseudogene MGP_LPJ_T0085100.1 MGP_LPJ_G0032498.1 mouse_genomes_project 7 106187918 106200216 - MGP_LPJ_P0085100 Folr1 protein_coding protein_coding MGP_LPJ_T0085101.1 MGP_LPJ_G0032498.1 mouse_genomes_project 7 106187918 106193744 - MGP_LPJ_P0085101 Folr1 protein_coding protein_coding MGP_LPJ_T0085102.1 MGP_LPJ_G0032498.1 mouse_genomes_project 7 106187918 106200240 - MGP_LPJ_P0085102 Folr1 protein_coding protein_coding MGP_LPJ_T0085103.1 MGP_LPJ_G0032498.1 mouse_genomes_project 7 106187918 106200321 - MGP_LPJ_P0085103 Folr1 protein_coding protein_coding MGP_LPJ_T0085104.1 MGP_LPJ_G0032498.1 mouse_genomes_project 7 106187918 106200314 - MGP_LPJ_P0085104 Folr1 protein_coding protein_coding MGP_LPJ_T0085105.1 MGP_LPJ_G0032498.1 mouse_genomes_project 7 106187918 106196992 - MGP_LPJ_P0085105 Folr1 protein_coding protein_coding MGP_LPJ_T0085106.1 MGP_LPJ_G0032498.1 mouse_genomes_project 7 106188691 106199084 - MGP_LPJ_P0085106 Folr1 protein_coding protein_coding MGP_LPJ_T0085107.1 MGP_LPJ_G0032498.1 mouse_genomes_project 7 106188701 106200247 - MGP_LPJ_P0085107 Folr1 protein_coding protein_coding MGP_LPJ_T0085108.1 MGP_LPJ_G0032498.1 mouse_genomes_project 7 106188760 106200319 - MGP_LPJ_P0085108 Folr1 protein_coding protein_coding MGP_LPJ_T0085109.1 MGP_LPJ_G0032498.1 mouse_genomes_project 7 106188993 106198857 - MGP_LPJ_P0085109 Folr1 protein_coding protein_coding MGP_LPJ_T0085110.1 MGP_LPJ_G0032498.1 mouse_genomes_project 7 106193521 106200321 - MGP_LPJ_P0085110 Folr1 protein_coding protein_coding MGP_LPJ_T0085111.1 MGP_LPJ_G0032498.1 mouse_genomes_project 7 106193523 106198551 - MGP_LPJ_P0085111 Folr1 protein_coding protein_coding MGP_LPJ_T0085112.1 MGP_LPJ_G0032498.1 mouse_genomes_project 7 106193526 106200320 - MGP_LPJ_P0085112 Folr1 protein_coding protein_coding MGP_LPJ_T0085113.1 MGP_LPJ_G0032498.1 mouse_genomes_project 7 106193559 106198200 - MGP_LPJ_P0085113 Folr1 protein_coding protein_coding MGP_LPJ_T0085114.1 MGP_LPJ_G0032498.1 mouse_genomes_project 7 106193598 106198855 - MGP_LPJ_P0085114 Folr1 protein_coding protein_coding MGP_LPJ_T0085115.1 MGP_LPJ_G0032498.1 mouse_genomes_project 7 106193676 106200117 - MGP_LPJ_P0085115 Folr1 protein_coding protein_coding MGP_LPJ_T0085116.1 MGP_LPJ_G0032498.1 mouse_genomes_project 7 106197997 106199634 - Folr1 protein_coding processed_transcript MGP_LPJ_T0005240.1 MGP_LPJ_G0004457.1 mouse_genomes_project 7 46638031 46640170 - antisense antisense MGP_LPJ_T0005241.1 MGP_LPJ_G0004457.1 mouse_genomes_project 7 46639125 46640438 - antisense antisense MGP_LPJ_T0083218.1 MGP_LPJ_G0032033.1 mouse_genomes_project 7 44282081 44291018 - MGP_LPJ_P0083218 Cd33 protein_coding protein_coding MGP_LPJ_T0083219.1 MGP_LPJ_G0032033.1 mouse_genomes_project 7 44285837 44290948 - MGP_LPJ_P0083219 Cd33 protein_coding protein_coding MGP_LPJ_T0083220.1 MGP_LPJ_G0032033.1 mouse_genomes_project 7 44286216 44302232 - MGP_LPJ_P0083220 Cd33 protein_coding protein_coding MGP_LPJ_T0083221.1 MGP_LPJ_G0032033.1 mouse_genomes_project 7 44286368 44290525 - MGP_LPJ_P0083221 Cd33 protein_coding protein_coding MGP_LPJ_T0083222.1 MGP_LPJ_G0032033.1 mouse_genomes_project 7 44288194 44290934 - Cd33 protein_coding retained_intron MGP_LPJ_T0083223.1 MGP_LPJ_G0032033.1 mouse_genomes_project 7 44289881 44290801 - Cd33 protein_coding processed_transcript MGP_LPJ_T0015752.1 MGP_LPJ_G0013843.1 mouse_genomes_project 7 45135367 45136340 - processed_pseudogene processed_pseudogene MGP_LPJ_T0084305.1 MGP_LPJ_G0032297.1 mouse_genomes_project 7 82814327 82857485 + MGP_LPJ_P0084305 Ticrr protein_coding protein_coding MGP_LPJ_T0084306.1 MGP_LPJ_G0032297.1 mouse_genomes_project 7 82814353 82815805 + Ticrr protein_coding retained_intron MGP_LPJ_T0084307.1 MGP_LPJ_G0032297.1 mouse_genomes_project 7 82814362 82857471 + MGP_LPJ_P0084307 Ticrr protein_coding nonsense_mediated_decay MGP_LPJ_T0084308.1 MGP_LPJ_G0032297.1 mouse_genomes_project 7 82814376 82843885 + MGP_LPJ_P0084308 Ticrr protein_coding nonsense_mediated_decay MGP_LPJ_T0084309.1 MGP_LPJ_G0032297.1 mouse_genomes_project 7 82814378 82853270 + MGP_LPJ_P0084309 Ticrr protein_coding nonsense_mediated_decay MGP_LPJ_T0084310.1 MGP_LPJ_G0032297.1 mouse_genomes_project 7 82828954 82835125 + Ticrr protein_coding processed_transcript MGP_LPJ_T0084311.1 MGP_LPJ_G0032297.1 mouse_genomes_project 7 82830338 82835125 + Ticrr protein_coding retained_intron MGP_LPJ_T0084910.1 MGP_LPJ_G0032457.1 mouse_genomes_project 7 103494556 103574425 + MGP_LPJ_P0084910 Gdpd5 protein_coding unknown_likely_coding MGP_LPJ_T0084911.1 MGP_LPJ_G0032457.1 mouse_genomes_project 7 103494572 103574415 + MGP_LPJ_P0084911 Gdpd5 protein_coding protein_coding MGP_LPJ_T0085382.1 MGP_LPJ_G0032654.1 mouse_genomes_project 7 109811859 109812947 - MGP_LPJ_P0085382 protein_coding protein_coding MGP_LPJ_T0082348.1 MGP_LPJ_G0031841.1 mouse_genomes_project 7 27395003 27403718 - MGP_LPJ_P0082348 Dll3 protein_coding protein_coding MGP_LPJ_T0082349.1 MGP_LPJ_G0031841.1 mouse_genomes_project 7 27395049 27395932 - Dll3 protein_coding processed_transcript MGP_LPJ_T0082350.1 MGP_LPJ_G0031841.1 mouse_genomes_project 7 27400151 27403252 - Dll3 protein_coding retained_intron MGP_LPJ_T0082339.1 MGP_LPJ_G0031837.1 mouse_genomes_project 7 27281404 27289230 + MGP_LPJ_P0082339 Dyrk1b protein_coding protein_coding MGP_LPJ_T0082340.1 MGP_LPJ_G0031837.1 mouse_genomes_project 7 27281429 27288859 + MGP_LPJ_P0082340 Dyrk1b protein_coding protein_coding MGP_LPJ_T0082341.1 MGP_LPJ_G0031837.1 mouse_genomes_project 7 27282201 27289230 + MGP_LPJ_P0082341 Dyrk1b protein_coding protein_coding MGP_LPJ_T0082342.1 MGP_LPJ_G0031837.1 mouse_genomes_project 7 27282251 27288879 + MGP_LPJ_P0082342 Dyrk1b protein_coding protein_coding MGP_LPJ_T0102400.1 MGP_LPJ_G0040436.1 mouse_genomes_project 7 49558774 49559723 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0010902.1 MGP_LPJ_G0009020.1 mouse_genomes_project 7 63952722 63952802 - Gm23490 miRNA miRNA MGP_LPJ_T0085886.1 MGP_LPJ_G0032819.1 mouse_genomes_project 7 124012161 124030356 - MGP_LPJ_P0085886 Gde1 protein_coding protein_coding MGP_LPJ_T0085887.1 MGP_LPJ_G0032819.1 mouse_genomes_project 7 124015214 124029958 - MGP_LPJ_P0085887 Gde1 protein_coding protein_coding MGP_LPJ_T0099750.1 MGP_LPJ_G0038013.1 mouse_genomes_project 7 148780673 148780780 - Gm25416 snRNA snRNA MGP_LPJ_T0008896.1 MGP_LPJ_G0007185.1 mouse_genomes_project 7 66418779 66426045 + Gm20670 lincRNA lincRNA MGP_LPJ_T0082311.1 MGP_LPJ_G0031825.1 mouse_genomes_project 7 26713775 26796188 + MGP_LPJ_P0082311 Zfp60 protein_coding protein_coding MGP_LPJ_T0082312.1 MGP_LPJ_G0031825.1 mouse_genomes_project 7 26713830 26794678 + MGP_LPJ_P0082312 Zfp60 protein_coding nonsense_mediated_decay MGP_LPJ_T0082313.1 MGP_LPJ_G0031825.1 mouse_genomes_project 7 26713830 26796593 + MGP_LPJ_P0082313 Zfp60 protein_coding protein_coding MGP_LPJ_T0082314.1 MGP_LPJ_G0031825.1 mouse_genomes_project 7 26713830 26799834 + MGP_LPJ_P0082314 Zfp60 protein_coding protein_coding MGP_LPJ_T0102357.1 MGP_LPJ_G0040393.1 mouse_genomes_project 7 35165531 35169225 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0009002.1 MGP_LPJ_G0007255.1 mouse_genomes_project 7 118890219 118912734 + Gm29507 lincRNA lincRNA MGP_LPJ_T0083274.1 MGP_LPJ_G0032061.1 mouse_genomes_project 7 45057979 45074744 - MGP_LPJ_P0083274 protein_coding protein_coding MGP_LPJ_T0082372.1 MGP_LPJ_G0031846.1 mouse_genomes_project 7 27483331 27486640 - MGP_LPJ_P0082372 Zfp36 protein_coding protein_coding MGP_LPJ_T0086134.1 MGP_LPJ_G0032879.1 mouse_genomes_project 7 128947009 128977792 + MGP_LPJ_P0086134 Lcmt1 protein_coding protein_coding MGP_LPJ_T0086135.1 MGP_LPJ_G0032879.1 mouse_genomes_project 7 128955207 129006184 + MGP_LPJ_P0086135 Lcmt1 protein_coding protein_coding MGP_LPJ_T0086136.1 MGP_LPJ_G0032879.1 mouse_genomes_project 7 128955281 129006175 + MGP_LPJ_P0086136 Lcmt1 protein_coding protein_coding MGP_LPJ_T0086137.1 MGP_LPJ_G0032879.1 mouse_genomes_project 7 128984494 128998586 + Lcmt1 protein_coding processed_transcript MGP_LPJ_T0086138.1 MGP_LPJ_G0032879.1 mouse_genomes_project 7 128993972 129006170 + Lcmt1 protein_coding retained_intron MGP_LPJ_T0086139.1 MGP_LPJ_G0032879.1 mouse_genomes_project 7 129003689 129006174 + Lcmt1 protein_coding retained_intron MGP_LPJ_T0085218.1 MGP_LPJ_G0032526.1 mouse_genomes_project 7 107000782 107001763 - MGP_LPJ_P0085218 Olfr553 protein_coding protein_coding MGP_LPJ_T0010845.1 MGP_LPJ_G0008963.1 mouse_genomes_project 7 99396 99478 + Mir292 miRNA miRNA MGP_LPJ_T0085132.1 MGP_LPJ_G0032501.1 mouse_genomes_project 7 106238898 106264406 + MGP_LPJ_P0085132 Lamtor1 protein_coding protein_coding MGP_LPJ_T0085133.1 MGP_LPJ_G0032501.1 mouse_genomes_project 7 106238919 106245806 + MGP_LPJ_P0085133 Lamtor1 protein_coding protein_coding MGP_LPJ_T0083762.1 MGP_LPJ_G0032180.1 mouse_genomes_project 7 47893691 47922860 + MGP_LPJ_P0083762 Gtf2h1 protein_coding protein_coding MGP_LPJ_T0083763.1 MGP_LPJ_G0032180.1 mouse_genomes_project 7 47893702 47903959 + MGP_LPJ_P0083763 Gtf2h1 protein_coding protein_coding MGP_LPJ_T0083764.1 MGP_LPJ_G0032180.1 mouse_genomes_project 7 47894259 47922333 + MGP_LPJ_P0083764 Gtf2h1 protein_coding protein_coding MGP_LPJ_T0083765.1 MGP_LPJ_G0032180.1 mouse_genomes_project 7 47900595 47921966 + MGP_LPJ_P0083765 Gtf2h1 protein_coding nonsense_mediated_decay MGP_LPJ_T0083766.1 MGP_LPJ_G0032180.1 mouse_genomes_project 7 47907482 47914506 + Gtf2h1 protein_coding retained_intron MGP_LPJ_T0085924.1 MGP_LPJ_G0032829.1 mouse_genomes_project 7 124896829 124917149 + MGP_LPJ_P0085924 Acsm5 protein_coding protein_coding MGP_LPJ_T0081976.1 MGP_LPJ_G0031748.1 mouse_genomes_project 7 23589986 23597790 + MGP_LPJ_P0081976 Dmrtc2 protein_coding protein_coding MGP_LPJ_T0087039.1 MGP_LPJ_G0033053.1 mouse_genomes_project 7 143355959 143590637 + MGP_LPJ_P0087039 Mgmt protein_coding protein_coding MGP_LPJ_T0005193.1 MGP_LPJ_G0004423.1 mouse_genomes_project 7 23979981 23981553 + 9130221H12Rik antisense antisense MGP_LPJ_T0005194.1 MGP_LPJ_G0004423.1 mouse_genomes_project 7 23980017 23981559 + 9130221H12Rik antisense antisense MGP_LPJ_T0102462.1 MGP_LPJ_G0040498.1 mouse_genomes_project 7 110500337 111451445 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0010897.1 MGP_LPJ_G0009015.1 mouse_genomes_project 7 59521927 59522029 + Mir6389 miRNA miRNA MGP_LPJ_T0009037.1 MGP_LPJ_G0007278.1 mouse_genomes_project 7 132747663 132751452 - lincRNA lincRNA MGP_LPJ_T0009038.1 MGP_LPJ_G0007278.1 mouse_genomes_project 7 132748566 132751779 - lincRNA lincRNA MGP_LPJ_T0009039.1 MGP_LPJ_G0007278.1 mouse_genomes_project 7 132748566 132752040 - lincRNA lincRNA MGP_LPJ_T0009040.1 MGP_LPJ_G0007278.1 mouse_genomes_project 7 132748566 132751761 - lincRNA lincRNA MGP_LPJ_T0009041.1 MGP_LPJ_G0007278.1 mouse_genomes_project 7 132748567 132751730 - lincRNA lincRNA MGP_LPJ_T0009042.1 MGP_LPJ_G0007278.1 mouse_genomes_project 7 132748568 132751788 - lincRNA lincRNA MGP_LPJ_T0009043.1 MGP_LPJ_G0007278.1 mouse_genomes_project 7 132750795 132751994 - lincRNA lincRNA MGP_LPJ_T0084529.1 MGP_LPJ_G0032337.1 mouse_genomes_project 7 84830958 84865435 - MGP_LPJ_P0084529 Fsd2 protein_coding protein_coding MGP_LPJ_T0081830.1 MGP_LPJ_G0031697.1 mouse_genomes_project 7 18071096 18107977 - MGP_LPJ_P0081830 Nectin2 protein_coding protein_coding MGP_LPJ_T0081831.1 MGP_LPJ_G0031697.1 mouse_genomes_project 7 18078667 18107977 - MGP_LPJ_P0081831 Nectin2 protein_coding protein_coding MGP_LPJ_T0010863.1 MGP_LPJ_G0008981.1 mouse_genomes_project 7 22999661 22999819 - Gm27592 miRNA miRNA MGP_LPJ_T0002345.1 MGP_LPJ_G0002253.1 mouse_genomes_project 7 149927482 149927541 + TEC TEC MGP_LPJ_T0010921.1 MGP_LPJ_G0009039.1 mouse_genomes_project 7 76622104 76622156 + Mir7234 miRNA miRNA MGP_LPJ_T0084068.1 MGP_LPJ_G0032255.1 mouse_genomes_project 7 68544038 68608665 + MGP_LPJ_P0084068 Chsy1 protein_coding protein_coding MGP_LPJ_T0005190.1 MGP_LPJ_G0004420.1 mouse_genomes_project 7 22745523 22749623 - Gm44793 antisense antisense MGP_LPJ_T0081969.1 MGP_LPJ_G0031745.1 mouse_genomes_project 7 23465710 23481905 - MGP_LPJ_P0081969 Cd177 protein_coding protein_coding MGP_LPJ_T0081970.1 MGP_LPJ_G0031745.1 mouse_genomes_project 7 23466854 23472497 - Cd177 protein_coding retained_intron MGP_LPJ_T0083617.1 MGP_LPJ_G0032140.1 mouse_genomes_project 7 46621818 46625074 + MGP_LPJ_P0083617 Fut1 protein_coding protein_coding MGP_LPJ_T0083975.1 MGP_LPJ_G0032240.1 mouse_genomes_project 7 66504936 66638649 + MGP_LPJ_P0083975 Trpm1 protein_coding protein_coding MGP_LPJ_T0083976.1 MGP_LPJ_G0032240.1 mouse_genomes_project 7 66504946 66638006 + MGP_LPJ_P0083976 Trpm1 protein_coding protein_coding MGP_LPJ_T0083977.1 MGP_LPJ_G0032240.1 mouse_genomes_project 7 66504946 66591206 + MGP_LPJ_P0083977 Trpm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0083978.1 MGP_LPJ_G0032240.1 mouse_genomes_project 7 66505029 66638006 + MGP_LPJ_P0083978 Trpm1 protein_coding protein_coding MGP_LPJ_T0083979.1 MGP_LPJ_G0032240.1 mouse_genomes_project 7 66539986 66572057 + Trpm1 protein_coding retained_intron MGP_LPJ_T0083980.1 MGP_LPJ_G0032240.1 mouse_genomes_project 7 66540064 66557081 + Trpm1 protein_coding processed_transcript MGP_LPJ_T0083981.1 MGP_LPJ_G0032240.1 mouse_genomes_project 7 66540064 66588114 + MGP_LPJ_P0083981 Trpm1 protein_coding protein_coding MGP_LPJ_T0083982.1 MGP_LPJ_G0032240.1 mouse_genomes_project 7 66540155 66588042 + Trpm1 protein_coding retained_intron MGP_LPJ_T0083983.1 MGP_LPJ_G0032240.1 mouse_genomes_project 7 66540157 66638631 + MGP_LPJ_P0083983 Trpm1 protein_coding protein_coding MGP_LPJ_T0083984.1 MGP_LPJ_G0032240.1 mouse_genomes_project 7 66540158 66559752 + MGP_LPJ_P0083984 Trpm1 protein_coding protein_coding MGP_LPJ_T0083985.1 MGP_LPJ_G0032240.1 mouse_genomes_project 7 66540160 66582013 + MGP_LPJ_P0083985 Trpm1 protein_coding protein_coding MGP_LPJ_T0083986.1 MGP_LPJ_G0032240.1 mouse_genomes_project 7 66540189 66582013 + MGP_LPJ_P0083986 Trpm1 protein_coding protein_coding MGP_LPJ_T0083987.1 MGP_LPJ_G0032240.1 mouse_genomes_project 7 66540206 66559725 + MGP_LPJ_P0083987 Trpm1 protein_coding protein_coding MGP_LPJ_T0083988.1 MGP_LPJ_G0032240.1 mouse_genomes_project 7 66557059 66559868 + MGP_LPJ_P0083988 Trpm1 protein_coding protein_coding MGP_LPJ_T0083989.1 MGP_LPJ_G0032240.1 mouse_genomes_project 7 66560844 66571519 + Trpm1 protein_coding processed_transcript MGP_LPJ_T0083990.1 MGP_LPJ_G0032240.1 mouse_genomes_project 7 66560844 66568959 + MGP_LPJ_P0083990 Trpm1 protein_coding protein_coding MGP_LPJ_T0083991.1 MGP_LPJ_G0032240.1 mouse_genomes_project 7 66570652 66583634 + Trpm1 protein_coding retained_intron MGP_LPJ_T0083992.1 MGP_LPJ_G0032240.1 mouse_genomes_project 7 66571538 66587038 + MGP_LPJ_P0083992 Trpm1 protein_coding protein_coding MGP_LPJ_T0083993.1 MGP_LPJ_G0032240.1 mouse_genomes_project 7 66583152 66586501 + Trpm1 protein_coding retained_intron MGP_LPJ_T0083994.1 MGP_LPJ_G0032240.1 mouse_genomes_project 7 66591047 66611420 + Trpm1 protein_coding retained_intron MGP_LPJ_T0083995.1 MGP_LPJ_G0032240.1 mouse_genomes_project 7 66591414 66598108 + Trpm1 protein_coding processed_transcript MGP_LPJ_T0083996.1 MGP_LPJ_G0032240.1 mouse_genomes_project 7 66613647 66637014 + Trpm1 protein_coding retained_intron MGP_LPJ_T0083997.1 MGP_LPJ_G0032240.1 mouse_genomes_project 7 66613860 66636894 + MGP_LPJ_P0083997 Trpm1 protein_coding protein_coding MGP_LPJ_T0102300.1 MGP_LPJ_G0040337.1 mouse_genomes_project 7 9173249 9173427 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0081988.1 MGP_LPJ_G0031751.1 mouse_genomes_project 7 23625532 23647987 + MGP_LPJ_P0081988 Arhgef1 protein_coding protein_coding MGP_LPJ_T0081989.1 MGP_LPJ_G0031751.1 mouse_genomes_project 7 23625657 23647984 + MGP_LPJ_P0081989 Arhgef1 protein_coding protein_coding MGP_LPJ_T0081990.1 MGP_LPJ_G0031751.1 mouse_genomes_project 7 23625671 23647984 + MGP_LPJ_P0081990 Arhgef1 protein_coding protein_coding MGP_LPJ_T0081991.1 MGP_LPJ_G0031751.1 mouse_genomes_project 7 23625676 23647989 + MGP_LPJ_P0081991 Arhgef1 protein_coding protein_coding MGP_LPJ_T0081992.1 MGP_LPJ_G0031751.1 mouse_genomes_project 7 23625685 23627006 + Arhgef1 protein_coding processed_transcript MGP_LPJ_T0081993.1 MGP_LPJ_G0031751.1 mouse_genomes_project 7 23625691 23630510 + MGP_LPJ_P0081993 Arhgef1 protein_coding protein_coding MGP_LPJ_T0081994.1 MGP_LPJ_G0031751.1 mouse_genomes_project 7 23625695 23632578 + Arhgef1 protein_coding retained_intron MGP_LPJ_T0081995.1 MGP_LPJ_G0031751.1 mouse_genomes_project 7 23626977 23636076 + MGP_LPJ_P0081995 Arhgef1 protein_coding protein_coding MGP_LPJ_T0081996.1 MGP_LPJ_G0031751.1 mouse_genomes_project 7 23626979 23647984 + Arhgef1 protein_coding retained_intron MGP_LPJ_T0081997.1 MGP_LPJ_G0031751.1 mouse_genomes_project 7 23627026 23635225 + MGP_LPJ_P0081997 Arhgef1 protein_coding protein_coding MGP_LPJ_T0081998.1 MGP_LPJ_G0031751.1 mouse_genomes_project 7 23627028 23647987 + MGP_LPJ_P0081998 Arhgef1 protein_coding protein_coding MGP_LPJ_T0081999.1 MGP_LPJ_G0031751.1 mouse_genomes_project 7 23627061 23644486 + MGP_LPJ_P0081999 Arhgef1 protein_coding protein_coding MGP_LPJ_T0082000.1 MGP_LPJ_G0031751.1 mouse_genomes_project 7 23630264 23634765 + MGP_LPJ_P0082000 Arhgef1 protein_coding protein_coding MGP_LPJ_T0082001.1 MGP_LPJ_G0031751.1 mouse_genomes_project 7 23635241 23638562 + Arhgef1 protein_coding retained_intron MGP_LPJ_T0082002.1 MGP_LPJ_G0031751.1 mouse_genomes_project 7 23637000 23647501 + MGP_LPJ_P0082002 Arhgef1 protein_coding protein_coding MGP_LPJ_T0082003.1 MGP_LPJ_G0031751.1 mouse_genomes_project 7 23639371 23643774 + Arhgef1 protein_coding retained_intron MGP_LPJ_T0082004.1 MGP_LPJ_G0031751.1 mouse_genomes_project 7 23644642 23646242 + Arhgef1 protein_coding retained_intron MGP_LPJ_T0082005.1 MGP_LPJ_G0031751.1 mouse_genomes_project 7 23644747 23646880 + Arhgef1 protein_coding retained_intron MGP_LPJ_T0082006.1 MGP_LPJ_G0031751.1 mouse_genomes_project 7 23644757 23647331 + Arhgef1 protein_coding processed_transcript MGP_LPJ_T0081198.1 MGP_LPJ_G0031467.1 mouse_genomes_project 7 1826215 1832516 - MGP_LPJ_P0081198 Tmem238 protein_coding protein_coding MGP_LPJ_T0081199.1 MGP_LPJ_G0031467.1 mouse_genomes_project 7 1826830 1831933 - MGP_LPJ_P0081199 Tmem238 protein_coding nonsense_mediated_decay MGP_LPJ_T0081348.1 MGP_LPJ_G0031546.1 mouse_genomes_project 7 9849762 9857361 - MGP_LPJ_P0081348 Zfp551 protein_coding protein_coding MGP_LPJ_T0081349.1 MGP_LPJ_G0031546.1 mouse_genomes_project 7 9851558 9857098 - MGP_LPJ_P0081349 Zfp551 protein_coding protein_coding MGP_LPJ_T0081350.1 MGP_LPJ_G0031546.1 mouse_genomes_project 7 9851711 9857049 - Zfp551 protein_coding processed_transcript MGP_LPJ_T0085552.1 MGP_LPJ_G0032729.1 mouse_genomes_project 7 113140446 113140989 - MGP_LPJ_P0085552 protein_coding protein_coding MGP_LPJ_T0081280.1 MGP_LPJ_G0031503.1 mouse_genomes_project 7 3459232 3487120 + MGP_LPJ_P0081280 Zfp667 protein_coding protein_coding MGP_LPJ_T0081281.1 MGP_LPJ_G0031503.1 mouse_genomes_project 7 3459246 3480196 + Zfp667 protein_coding processed_transcript MGP_LPJ_T0081282.1 MGP_LPJ_G0031503.1 mouse_genomes_project 7 3459267 3487099 + MGP_LPJ_P0081282 Zfp667 protein_coding protein_coding MGP_LPJ_T0081283.1 MGP_LPJ_G0031503.1 mouse_genomes_project 7 3460519 3486919 + MGP_LPJ_P0081283 Zfp667 protein_coding protein_coding MGP_LPJ_T0081284.1 MGP_LPJ_G0031503.1 mouse_genomes_project 7 3468537 3473251 + Zfp667 protein_coding retained_intron MGP_LPJ_T0084338.1 MGP_LPJ_G0032306.1 mouse_genomes_project 7 83096608 83107108 - MGP_LPJ_P0084338 Arpin protein_coding protein_coding MGP_LPJ_T0081323.1 MGP_LPJ_G0031526.1 mouse_genomes_project 7 7590059 7591583 - MGP_LPJ_P0081323 Vmn1r66 protein_coding protein_coding MGP_LPJ_T0085705.1 MGP_LPJ_G0032783.1 mouse_genomes_project 7 117082076 117174020 + MGP_LPJ_P0085705 Usp47 protein_coding protein_coding MGP_LPJ_T0085706.1 MGP_LPJ_G0032783.1 mouse_genomes_project 7 117082278 117173965 + MGP_LPJ_P0085706 Usp47 protein_coding unknown_likely_coding MGP_LPJ_T0083165.1 MGP_LPJ_G0032017.1 mouse_genomes_project 7 42488118 42572833 + MGP_LPJ_P0083165 Vmn2r60 protein_coding protein_coding MGP_LPJ_T0015714.1 MGP_LPJ_G0013805.1 mouse_genomes_project 7 33366947 33367739 + processed_pseudogene processed_pseudogene MGP_LPJ_T0084361.1 MGP_LPJ_G0032311.1 mouse_genomes_project 7 83433763 83443375 + MGP_LPJ_P0084361 Gdpgp1 protein_coding protein_coding MGP_LPJ_T0008825.1 MGP_LPJ_G0007129.1 mouse_genomes_project 7 23124030 23127003 + Gm44512 lincRNA lincRNA MGP_LPJ_T0085847.1 MGP_LPJ_G0032810.1 mouse_genomes_project 7 122673711 122926849 + Xylt1 protein_coding retained_intron MGP_LPJ_T0085848.1 MGP_LPJ_G0032810.1 mouse_genomes_project 7 122673711 122959678 + MGP_LPJ_P0085848 Xylt1 protein_coding protein_coding MGP_LPJ_T0085849.1 MGP_LPJ_G0032810.1 mouse_genomes_project 7 122768056 122842335 + Xylt1 protein_coding retained_intron MGP_LPJ_T0005326.1 MGP_LPJ_G0004517.1 mouse_genomes_project 7 134101672 134106869 - Gm44850 antisense antisense MGP_LPJ_T0099714.1 MGP_LPJ_G0037977.1 mouse_genomes_project 7 68554007 68554108 - Gm23042 snRNA snRNA MGP_LPJ_T0015849.1 MGP_LPJ_G0013940.1 mouse_genomes_project 7 121727929 121728217 - processed_pseudogene processed_pseudogene MGP_LPJ_T0087112.1 MGP_LPJ_G0033070.1 mouse_genomes_project 7 146509613 146538526 + MGP_LPJ_P0087112 Kndc1 protein_coding protein_coding MGP_LPJ_T0087113.1 MGP_LPJ_G0033070.1 mouse_genomes_project 7 146509613 146561442 + MGP_LPJ_P0087113 Kndc1 protein_coding protein_coding MGP_LPJ_T0087114.1 MGP_LPJ_G0033070.1 mouse_genomes_project 7 146509756 146529253 + MGP_LPJ_P0087114 Kndc1 protein_coding protein_coding MGP_LPJ_T0087115.1 MGP_LPJ_G0033070.1 mouse_genomes_project 7 146538301 146561442 + Kndc1 protein_coding retained_intron MGP_LPJ_T0099696.1 MGP_LPJ_G0037959.1 mouse_genomes_project 7 14959462 14959589 - Gm25815 snRNA snRNA MGP_LPJ_T0084552.1 MGP_LPJ_G0032345.1 mouse_genomes_project 7 85198496 85254115 - MGP_LPJ_P0084552 Hdgfrp3 protein_coding protein_coding MGP_LPJ_T0084553.1 MGP_LPJ_G0032345.1 mouse_genomes_project 7 85209229 85254101 - MGP_LPJ_P0084553 Hdgfrp3 protein_coding protein_coding MGP_LPJ_T0084554.1 MGP_LPJ_G0032345.1 mouse_genomes_project 7 85214566 85253666 - Hdgfrp3 protein_coding retained_intron MGP_LPJ_T0083237.1 MGP_LPJ_G0032040.1 mouse_genomes_project 7 44453347 44460512 + MGP_LPJ_P0083237 Klk14 protein_coding protein_coding MGP_LPJ_T0015836.1 MGP_LPJ_G0013927.1 mouse_genomes_project 7 110543791 110545244 + processed_pseudogene processed_pseudogene MGP_LPJ_T0082186.1 MGP_LPJ_G0031799.1 mouse_genomes_project 7 26101912 26115054 + MGP_LPJ_P0082186 Cyp2t4 protein_coding protein_coding MGP_LPJ_T0082187.1 MGP_LPJ_G0031799.1 mouse_genomes_project 7 26111155 26115158 + MGP_LPJ_P0082187 Cyp2t4 protein_coding protein_coding MGP_LPJ_T0008850.1 MGP_LPJ_G0007151.1 mouse_genomes_project 7 34826782 34833183 - Gm45229 lincRNA lincRNA MGP_LPJ_T0086742.1 MGP_LPJ_G0032990.1 mouse_genomes_project 7 134036446 134088152 + MGP_LPJ_P0086742 Itgad protein_coding protein_coding MGP_LPJ_T0086743.1 MGP_LPJ_G0032990.1 mouse_genomes_project 7 134058074 134088155 + MGP_LPJ_P0086743 Itgad protein_coding protein_coding MGP_LPJ_T0086744.1 MGP_LPJ_G0032990.1 mouse_genomes_project 7 134058083 134088152 + MGP_LPJ_P0086744 Itgad protein_coding protein_coding MGP_LPJ_T0086745.1 MGP_LPJ_G0032990.1 mouse_genomes_project 7 134086272 134088155 + MGP_LPJ_P0086745 Itgad protein_coding protein_coding MGP_LPJ_T0086746.1 MGP_LPJ_G0032990.1 mouse_genomes_project 7 134086534 134109900 + MGP_LPJ_P0086746 Itgad protein_coding protein_coding MGP_LPJ_T0005266.1 MGP_LPJ_G0004475.1 mouse_genomes_project 7 83273511 83274971 - Gm44949 antisense antisense MGP_LPJ_T0087099.1 MGP_LPJ_G0033068.1 mouse_genomes_project 7 146183392 146192888 - MGP_LPJ_P0087099 protein_coding protein_coding MGP_LPJ_T0087100.1 MGP_LPJ_G0033068.1 mouse_genomes_project 7 146183392 146203210 - MGP_LPJ_P0087100 protein_coding protein_coding MGP_LPJ_T0087101.1 MGP_LPJ_G0033068.1 mouse_genomes_project 7 146183392 146280711 - MGP_LPJ_P0087101 protein_coding protein_coding MGP_LPJ_T0087102.1 MGP_LPJ_G0033068.1 mouse_genomes_project 7 146183521 146203190 - protein_coding retained_intron MGP_LPJ_T0087103.1 MGP_LPJ_G0033068.1 mouse_genomes_project 7 146198856 146203210 - protein_coding retained_intron MGP_LPJ_T0087104.1 MGP_LPJ_G0033068.1 mouse_genomes_project 7 146235182 146280711 - MGP_LPJ_P0087104 protein_coding nonsense_mediated_decay MGP_LPJ_T0087105.1 MGP_LPJ_G0033068.1 mouse_genomes_project 7 146235182 146257747 - MGP_LPJ_P0087105 protein_coding nonsense_mediated_decay MGP_LPJ_T0087106.1 MGP_LPJ_G0033068.1 mouse_genomes_project 7 146242131 146280711 - protein_coding retained_intron MGP_LPJ_T0087107.1 MGP_LPJ_G0033068.1 mouse_genomes_project 7 146272811 146280711 - MGP_LPJ_P0087107 protein_coding protein_coding MGP_LPJ_T0087108.1 MGP_LPJ_G0033068.1 mouse_genomes_project 7 146275162 146280711 - protein_coding retained_intron MGP_LPJ_T0005295.1 MGP_LPJ_G0004494.1 mouse_genomes_project 7 115653303 115666375 - Gm28863 antisense antisense MGP_LPJ_T0082026.1 MGP_LPJ_G0031756.1 mouse_genomes_project 7 23810973 23815412 + Zfp574 protein_coding processed_transcript MGP_LPJ_T0082027.1 MGP_LPJ_G0031756.1 mouse_genomes_project 7 23811052 23815771 + Zfp574 protein_coding processed_transcript MGP_LPJ_T0082028.1 MGP_LPJ_G0031756.1 mouse_genomes_project 7 23815600 23821888 + MGP_LPJ_P0082028 Zfp574 protein_coding protein_coding MGP_LPJ_T0082029.1 MGP_LPJ_G0031756.1 mouse_genomes_project 7 23815679 23820876 + MGP_LPJ_P0082029 Zfp574 protein_coding protein_coding MGP_LPJ_T0081731.1 MGP_LPJ_G0031670.1 mouse_genomes_project 7 17566807 17581560 - MGP_LPJ_P0081731 Vasp protein_coding protein_coding MGP_LPJ_T0081732.1 MGP_LPJ_G0031670.1 mouse_genomes_project 7 17567462 17568010 - Vasp protein_coding retained_intron MGP_LPJ_T0081733.1 MGP_LPJ_G0031670.1 mouse_genomes_project 7 17570542 17570958 - Vasp protein_coding processed_transcript MGP_LPJ_T0081734.1 MGP_LPJ_G0031670.1 mouse_genomes_project 7 17570743 17576429 - Vasp protein_coding processed_transcript MGP_LPJ_T0085561.1 MGP_LPJ_G0032738.1 mouse_genomes_project 7 113468554 113469613 - MGP_LPJ_P0085561 Olfr502 protein_coding protein_coding MGP_LPJ_T0102424.1 MGP_LPJ_G0040460.1 mouse_genomes_project 7 89295157 89295876 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0099729.1 MGP_LPJ_G0037992.1 mouse_genomes_project 7 114750946 114752395 - Gm22822 snRNA snRNA MGP_LPJ_T0087419.1 MGP_LPJ_G0033153.1 mouse_genomes_project 7 148180112 148226531 - MGP_LPJ_P0087419 Chid1 protein_coding protein_coding MGP_LPJ_T0087420.1 MGP_LPJ_G0033153.1 mouse_genomes_project 7 148182372 148226493 - Chid1 protein_coding retained_intron MGP_LPJ_T0087421.1 MGP_LPJ_G0033153.1 mouse_genomes_project 7 148183023 148219608 - MGP_LPJ_P0087421 Chid1 protein_coding nonsense_mediated_decay MGP_LPJ_T0087422.1 MGP_LPJ_G0033153.1 mouse_genomes_project 7 148183023 148226539 - MGP_LPJ_P0087422 Chid1 protein_coding protein_coding MGP_LPJ_T0087423.1 MGP_LPJ_G0033153.1 mouse_genomes_project 7 148197542 148213242 - Chid1 protein_coding processed_transcript MGP_LPJ_T0087424.1 MGP_LPJ_G0033153.1 mouse_genomes_project 7 148202189 148226204 - MGP_LPJ_P0087424 Chid1 protein_coding protein_coding MGP_LPJ_T0087425.1 MGP_LPJ_G0033153.1 mouse_genomes_project 7 148218580 148226506 - Chid1 protein_coding retained_intron MGP_LPJ_T0087699.1 MGP_LPJ_G0033213.1 mouse_genomes_project 7 152273386 152282138 + MGP_LPJ_P0087699 Mrgprf protein_coding protein_coding MGP_LPJ_T0087700.1 MGP_LPJ_G0033213.1 mouse_genomes_project 7 152273457 152281930 + MGP_LPJ_P0087700 Mrgprf protein_coding protein_coding MGP_LPJ_T0005269.1 MGP_LPJ_G0004478.1 mouse_genomes_project 7 83985988 83992662 + Gm44649 antisense antisense MGP_LPJ_T0005270.1 MGP_LPJ_G0004478.1 mouse_genomes_project 7 83986011 83987340 + Gm44649 antisense antisense MGP_LPJ_T0082103.1 MGP_LPJ_G0031776.1 mouse_genomes_project 7 24444811 24453680 + MGP_LPJ_P0082103 Exosc5 protein_coding protein_coding MGP_LPJ_T0082104.1 MGP_LPJ_G0031776.1 mouse_genomes_project 7 24444838 24457012 + MGP_LPJ_P0082104 Exosc5 protein_coding protein_coding MGP_LPJ_T0082105.1 MGP_LPJ_G0031776.1 mouse_genomes_project 7 24444859 24453680 + Exosc5 protein_coding retained_intron MGP_LPJ_T0082106.1 MGP_LPJ_G0031776.1 mouse_genomes_project 7 24444859 24451954 + MGP_LPJ_P0082106 Exosc5 protein_coding nonsense_mediated_decay MGP_LPJ_T0082107.1 MGP_LPJ_G0031776.1 mouse_genomes_project 7 24444865 24450049 + MGP_LPJ_P0082107 Exosc5 protein_coding nonsense_mediated_decay MGP_LPJ_T0082108.1 MGP_LPJ_G0031776.1 mouse_genomes_project 7 24450034 24452422 + Exosc5 protein_coding retained_intron MGP_LPJ_T0084063.1 MGP_LPJ_G0032254.1 mouse_genomes_project 7 68514484 68524027 + MGP_LPJ_P0084063 Vimp protein_coding protein_coding MGP_LPJ_T0084064.1 MGP_LPJ_G0032254.1 mouse_genomes_project 7 68514512 68522072 + Vimp protein_coding retained_intron MGP_LPJ_T0084065.1 MGP_LPJ_G0032254.1 mouse_genomes_project 7 68514513 68524025 + MGP_LPJ_P0084065 Vimp protein_coding protein_coding MGP_LPJ_T0084066.1 MGP_LPJ_G0032254.1 mouse_genomes_project 7 68514522 68523743 + MGP_LPJ_P0084066 Vimp protein_coding nonsense_mediated_decay MGP_LPJ_T0084067.1 MGP_LPJ_G0032254.1 mouse_genomes_project 7 68514549 68523990 + MGP_LPJ_P0084067 Vimp protein_coding protein_coding MGP_LPJ_T0085377.1 MGP_LPJ_G0032649.1 mouse_genomes_project 7 109639139 109640078 + MGP_LPJ_P0085377 Olfr677 protein_coding protein_coding MGP_LPJ_T0005268.1 MGP_LPJ_G0004477.1 mouse_genomes_project 7 83857662 83865996 + Gm15880 antisense antisense MGP_LPJ_T0084156.1 MGP_LPJ_G0032274.1 mouse_genomes_project 7 76154779 76201413 + MGP_LPJ_P0084156 Rgma protein_coding protein_coding MGP_LPJ_T0084157.1 MGP_LPJ_G0032274.1 mouse_genomes_project 7 76170380 76191048 + MGP_LPJ_P0084157 Rgma protein_coding protein_coding MGP_LPJ_T0084158.1 MGP_LPJ_G0032274.1 mouse_genomes_project 7 76170496 76172468 + Rgma protein_coding retained_intron MGP_LPJ_T0081529.1 MGP_LPJ_G0031607.1 mouse_genomes_project 7 14215502 14217230 - Ccdc9 protein_coding retained_intron MGP_LPJ_T0081530.1 MGP_LPJ_G0031607.1 mouse_genomes_project 7 14215505 14228224 - MGP_LPJ_P0081530 Ccdc9 protein_coding protein_coding MGP_LPJ_T0081531.1 MGP_LPJ_G0031607.1 mouse_genomes_project 7 14215773 14228182 - MGP_LPJ_P0081531 Ccdc9 protein_coding protein_coding MGP_LPJ_T0081532.1 MGP_LPJ_G0031607.1 mouse_genomes_project 7 14216920 14226493 - MGP_LPJ_P0081532 Ccdc9 protein_coding protein_coding MGP_LPJ_T0081533.1 MGP_LPJ_G0031607.1 mouse_genomes_project 7 14216933 14222125 - Ccdc9 protein_coding retained_intron MGP_LPJ_T0081534.1 MGP_LPJ_G0031607.1 mouse_genomes_project 7 14217328 14219845 - MGP_LPJ_P0081534 Ccdc9 protein_coding protein_coding MGP_LPJ_T0081535.1 MGP_LPJ_G0031607.1 mouse_genomes_project 7 14217473 14218157 - Ccdc9 protein_coding retained_intron MGP_LPJ_T0081536.1 MGP_LPJ_G0031607.1 mouse_genomes_project 7 14218053 14222594 - Ccdc9 protein_coding retained_intron MGP_LPJ_T0081537.1 MGP_LPJ_G0031607.1 mouse_genomes_project 7 14222053 14223235 - Ccdc9 protein_coding processed_transcript MGP_LPJ_T0081538.1 MGP_LPJ_G0031607.1 mouse_genomes_project 7 14223939 14228214 - MGP_LPJ_P0081538 Ccdc9 protein_coding nonsense_mediated_decay MGP_LPJ_T0081539.1 MGP_LPJ_G0031607.1 mouse_genomes_project 7 14223948 14226970 - MGP_LPJ_P0081539 Ccdc9 protein_coding protein_coding MGP_LPJ_T0081540.1 MGP_LPJ_G0031607.1 mouse_genomes_project 7 14223999 14228208 - MGP_LPJ_P0081540 Ccdc9 protein_coding protein_coding MGP_LPJ_T0081541.1 MGP_LPJ_G0031607.1 mouse_genomes_project 7 14224120 14228207 - Ccdc9 protein_coding retained_intron MGP_LPJ_T0081542.1 MGP_LPJ_G0031607.1 mouse_genomes_project 7 14224253 14227459 - MGP_LPJ_P0081542 Ccdc9 protein_coding protein_coding MGP_LPJ_T0085526.1 MGP_LPJ_G0032709.1 mouse_genomes_project 7 112296457 112366350 + MGP_LPJ_P0085526 Syt9 protein_coding protein_coding MGP_LPJ_T0085527.1 MGP_LPJ_G0032709.1 mouse_genomes_project 7 112296519 112477303 + MGP_LPJ_P0085527 Syt9 protein_coding nonsense_mediated_decay MGP_LPJ_T0085528.1 MGP_LPJ_G0032709.1 mouse_genomes_project 7 112296519 112477306 + MGP_LPJ_P0085528 Syt9 protein_coding protein_coding MGP_LPJ_T0085529.1 MGP_LPJ_G0032709.1 mouse_genomes_project 7 112431686 112477303 + Syt9 protein_coding retained_intron MGP_LPJ_T0085530.1 MGP_LPJ_G0032709.1 mouse_genomes_project 7 112431720 112477303 + Syt9 protein_coding retained_intron MGP_LPJ_T0083594.1 MGP_LPJ_G0032136.1 mouse_genomes_project 7 46501316 46535281 + MGP_LPJ_P0083594 Plekha4 protein_coding protein_coding MGP_LPJ_T0083595.1 MGP_LPJ_G0032136.1 mouse_genomes_project 7 46501316 46539947 + MGP_LPJ_P0083595 Plekha4 protein_coding protein_coding MGP_LPJ_T0083596.1 MGP_LPJ_G0032136.1 mouse_genomes_project 7 46506108 46539947 + MGP_LPJ_P0083596 Plekha4 protein_coding nonsense_mediated_decay MGP_LPJ_T0083597.1 MGP_LPJ_G0032136.1 mouse_genomes_project 7 46506155 46508440 + MGP_LPJ_P0083597 Plekha4 protein_coding protein_coding MGP_LPJ_T0083598.1 MGP_LPJ_G0032136.1 mouse_genomes_project 7 46506220 46539947 + MGP_LPJ_P0083598 Plekha4 protein_coding protein_coding MGP_LPJ_T0083599.1 MGP_LPJ_G0032136.1 mouse_genomes_project 7 46506683 46539750 + MGP_LPJ_P0083599 Plekha4 protein_coding protein_coding MGP_LPJ_T0083600.1 MGP_LPJ_G0032136.1 mouse_genomes_project 7 46535550 46539947 + Plekha4 protein_coding processed_transcript MGP_LPJ_T0083601.1 MGP_LPJ_G0032136.1 mouse_genomes_project 7 46538407 46539947 + Plekha4 protein_coding retained_intron MGP_LPJ_T0085242.1 MGP_LPJ_G0032548.1 mouse_genomes_project 7 107397278 107398220 - MGP_LPJ_P0085242 Olfr578 protein_coding protein_coding MGP_LPJ_T0087031.1 MGP_LPJ_G0033045.1 mouse_genomes_project 7 141019662 141546449 + MGP_LPJ_P0087031 Dock1 protein_coding protein_coding MGP_LPJ_T0098305.1 MGP_LPJ_G0036586.1 mouse_genomes_project 7 86101263 86101371 - n-R5s154 rRNA rRNA MGP_LPJ_T0085216.1 MGP_LPJ_G0032524.1 mouse_genomes_project 7 106963654 106964733 - MGP_LPJ_P0085216 Olfr551 protein_coding protein_coding MGP_LPJ_T0011705.1 MGP_LPJ_G0009823.1 mouse_genomes_project 7 99108353 99108646 + Gm23884 misc_RNA misc_RNA MGP_LPJ_T0081411.1 MGP_LPJ_G0031566.1 mouse_genomes_project 7 10528441 10532201 - Ube2m protein_coding processed_transcript MGP_LPJ_T0081412.1 MGP_LPJ_G0031566.1 mouse_genomes_project 7 10528511 10532181 - MGP_LPJ_P0081412 Ube2m protein_coding protein_coding MGP_LPJ_T0081413.1 MGP_LPJ_G0031566.1 mouse_genomes_project 7 10530141 10531202 - MGP_LPJ_P0081413 Ube2m protein_coding protein_coding MGP_LPJ_T0081414.1 MGP_LPJ_G0031566.1 mouse_genomes_project 7 10530167 10532283 - MGP_LPJ_P0081414 Ube2m protein_coding protein_coding MGP_LPJ_T0081415.1 MGP_LPJ_G0031566.1 mouse_genomes_project 7 10530529 10532300 - Ube2m protein_coding retained_intron MGP_LPJ_T0081416.1 MGP_LPJ_G0031566.1 mouse_genomes_project 7 10530995 10532825 - MGP_LPJ_P0081416 Ube2m protein_coding protein_coding MGP_LPJ_T0081417.1 MGP_LPJ_G0031566.1 mouse_genomes_project 7 10531119 10532075 - Ube2m protein_coding processed_transcript MGP_LPJ_T0102324.1 MGP_LPJ_G0040361.1 mouse_genomes_project 7 12210917 12211847 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0081964.1 MGP_LPJ_G0031741.1 mouse_genomes_project 7 23334048 23338716 + MGP_LPJ_P0081964 Lypd3 protein_coding protein_coding MGP_LPJ_T0081418.1 MGP_LPJ_G0031567.1 mouse_genomes_project 7 10537692 10550486 - MGP_LPJ_P0081418 Mzf1 protein_coding protein_coding MGP_LPJ_T0081419.1 MGP_LPJ_G0031567.1 mouse_genomes_project 7 10537696 10549598 - MGP_LPJ_P0081419 Mzf1 protein_coding protein_coding MGP_LPJ_T0081420.1 MGP_LPJ_G0031567.1 mouse_genomes_project 7 10537698 10550255 - Mzf1 protein_coding retained_intron MGP_LPJ_T0081421.1 MGP_LPJ_G0031567.1 mouse_genomes_project 7 10542887 10550636 - Mzf1 protein_coding retained_intron MGP_LPJ_T0102316.1 MGP_LPJ_G0040353.1 mouse_genomes_project 7 11035392 11035828 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0084692.1 MGP_LPJ_G0032407.1 mouse_genomes_project 7 93497259 93537212 - MGP_LPJ_P0084692 Ccdc81 protein_coding nonsense_mediated_decay MGP_LPJ_T0084693.1 MGP_LPJ_G0032407.1 mouse_genomes_project 7 93497500 93537201 - MGP_LPJ_P0084693 Ccdc81 protein_coding protein_coding MGP_LPJ_T0084502.1 MGP_LPJ_G0032331.1 mouse_genomes_project 7 84382562 84441690 + MGP_LPJ_P0084502 Slc28a1 protein_coding protein_coding MGP_LPJ_T0084503.1 MGP_LPJ_G0032331.1 mouse_genomes_project 7 84382617 84441690 + MGP_LPJ_P0084503 Slc28a1 protein_coding protein_coding MGP_LPJ_T0084504.1 MGP_LPJ_G0032331.1 mouse_genomes_project 7 84383343 84440498 + MGP_LPJ_P0084504 Slc28a1 protein_coding unknown_likely_coding MGP_LPJ_T0083241.1 MGP_LPJ_G0032042.1 mouse_genomes_project 7 44537099 44541788 + MGP_LPJ_P0083241 Klk12 protein_coding protein_coding MGP_LPJ_T0083242.1 MGP_LPJ_G0032042.1 mouse_genomes_project 7 44537302 44541678 + MGP_LPJ_P0083242 Klk12 protein_coding protein_coding MGP_LPJ_T0086747.1 MGP_LPJ_G0032991.1 mouse_genomes_project 7 134088085 134089032 - MGP_LPJ_P0086747 Cox6a2 protein_coding protein_coding MGP_LPJ_T0081488.1 MGP_LPJ_G0031596.1 mouse_genomes_project 7 13867057 13889310 - MGP_LPJ_P0081488 Ehd2 protein_coding protein_coding MGP_LPJ_T0081489.1 MGP_LPJ_G0031596.1 mouse_genomes_project 7 13877763 13889218 - MGP_LPJ_P0081489 Ehd2 protein_coding protein_coding MGP_LPJ_T0084026.1 MGP_LPJ_G0032248.1 mouse_genomes_project 7 67705327 67785441 - MGP_LPJ_P0084026 Tjp1 protein_coding protein_coding MGP_LPJ_T0084027.1 MGP_LPJ_G0032248.1 mouse_genomes_project 7 67705870 67785217 - MGP_LPJ_P0084027 Tjp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0084028.1 MGP_LPJ_G0032248.1 mouse_genomes_project 7 67705870 67785217 - MGP_LPJ_P0084028 Tjp1 protein_coding protein_coding MGP_LPJ_T0084029.1 MGP_LPJ_G0032248.1 mouse_genomes_project 7 67706666 67711466 - Tjp1 protein_coding processed_transcript MGP_LPJ_T0084030.1 MGP_LPJ_G0032248.1 mouse_genomes_project 7 67748814 67751389 - Tjp1 protein_coding retained_intron MGP_LPJ_T0084031.1 MGP_LPJ_G0032248.1 mouse_genomes_project 7 67751208 67956870 - MGP_LPJ_P0084031 Tjp1 protein_coding protein_coding MGP_LPJ_T0084032.1 MGP_LPJ_G0032248.1 mouse_genomes_project 7 67942272 67956955 - Tjp1 protein_coding retained_intron MGP_LPJ_T0082765.1 MGP_LPJ_G0031936.1 mouse_genomes_project 7 29932847 29942698 - MGP_LPJ_P0082765 Cox6b1 protein_coding protein_coding MGP_LPJ_T0085387.1 MGP_LPJ_G0032659.1 mouse_genomes_project 7 109986385 109987447 - MGP_LPJ_P0085387 Olfr690 protein_coding protein_coding MGP_LPJ_T0010950.1 MGP_LPJ_G0009068.1 mouse_genomes_project 7 146386713 146386820 + Mir6401 miRNA miRNA MGP_LPJ_T0082195.1 MGP_LPJ_G0031802.1 mouse_genomes_project 7 26124918 26140281 - MGP_LPJ_P0082195 Gm21983 protein_coding nonsense_mediated_decay MGP_LPJ_T0005249.1 MGP_LPJ_G0004463.1 mouse_genomes_project 7 68544038 68607988 - Gm26827 antisense antisense MGP_LPJ_T0015814.1 MGP_LPJ_G0013905.1 mouse_genomes_project 7 99420745 99421111 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009016.1 MGP_LPJ_G0007262.1 mouse_genomes_project 7 121787833 121795243 + lincRNA lincRNA MGP_LPJ_T0083655.1 MGP_LPJ_G0032153.1 mouse_genomes_project 7 46746245 46779352 - MGP_LPJ_P0083655 Sult2b1 protein_coding protein_coding MGP_LPJ_T0083656.1 MGP_LPJ_G0032153.1 mouse_genomes_project 7 46746262 46758546 - MGP_LPJ_P0083656 Sult2b1 protein_coding protein_coding MGP_LPJ_T0083657.1 MGP_LPJ_G0032153.1 mouse_genomes_project 7 46751404 46758546 - MGP_LPJ_P0083657 Sult2b1 protein_coding protein_coding MGP_LPJ_T0083658.1 MGP_LPJ_G0032153.1 mouse_genomes_project 7 46751438 46758809 - Sult2b1 protein_coding processed_transcript MGP_LPJ_T0083659.1 MGP_LPJ_G0032153.1 mouse_genomes_project 7 46778213 46779270 - Sult2b1 protein_coding processed_transcript MGP_LPJ_T0102331.1 MGP_LPJ_G0040368.1 mouse_genomes_project 7 14998135 14998496 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0081183.1 MGP_LPJ_G0031463.1 mouse_genomes_project 7 1788599 1789831 - MGP_LPJ_P0081183 Cox6b2 protein_coding protein_coding MGP_LPJ_T0081184.1 MGP_LPJ_G0031463.1 mouse_genomes_project 7 1788599 1789831 - MGP_LPJ_P0081184 Cox6b2 protein_coding protein_coding MGP_LPJ_T0081185.1 MGP_LPJ_G0031463.1 mouse_genomes_project 7 1788599 1789902 - MGP_LPJ_P0081185 Cox6b2 protein_coding protein_coding MGP_LPJ_T0081186.1 MGP_LPJ_G0031463.1 mouse_genomes_project 7 1788599 1789780 - MGP_LPJ_P0081186 Cox6b2 protein_coding protein_coding MGP_LPJ_T0081187.1 MGP_LPJ_G0031463.1 mouse_genomes_project 7 1788601 1789817 - MGP_LPJ_P0081187 Cox6b2 protein_coding protein_coding MGP_LPJ_T0081188.1 MGP_LPJ_G0031463.1 mouse_genomes_project 7 1788602 1789831 - MGP_LPJ_P0081188 Cox6b2 protein_coding nonsense_mediated_decay MGP_LPJ_T0081189.1 MGP_LPJ_G0031463.1 mouse_genomes_project 7 1788662 1789846 - MGP_LPJ_P0081189 Cox6b2 protein_coding protein_coding MGP_LPJ_T0081190.1 MGP_LPJ_G0031463.1 mouse_genomes_project 7 1788732 1789336 - Cox6b2 protein_coding retained_intron MGP_LPJ_T0081191.1 MGP_LPJ_G0031463.1 mouse_genomes_project 7 1788754 1789810 - MGP_LPJ_P0081191 Cox6b2 protein_coding protein_coding MGP_LPJ_T0086934.1 MGP_LPJ_G0033029.1 mouse_genomes_project 7 138800433 138805206 - MGP_LPJ_P0086934 Nkx1-2 protein_coding protein_coding MGP_LPJ_T0102298.1 MGP_LPJ_G0040335.1 mouse_genomes_project 7 7997438 7998300 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008857.1 MGP_LPJ_G0007158.1 mouse_genomes_project 7 36980979 36982150 + Gm28075 lincRNA lincRNA MGP_LPJ_T0082877.1 MGP_LPJ_G0031959.1 mouse_genomes_project 7 30441311 30450193 - MGP_LPJ_P0082877 Fxyd7 protein_coding protein_coding MGP_LPJ_T0082878.1 MGP_LPJ_G0031959.1 mouse_genomes_project 7 30441311 30450257 - MGP_LPJ_P0082878 Fxyd7 protein_coding protein_coding MGP_LPJ_T0084980.1 MGP_LPJ_G0032477.1 mouse_genomes_project 7 104705807 104718623 + Ucp3 protein_coding retained_intron MGP_LPJ_T0084981.1 MGP_LPJ_G0032477.1 mouse_genomes_project 7 104705808 104719687 + MGP_LPJ_P0084981 Ucp3 protein_coding protein_coding MGP_LPJ_T0084982.1 MGP_LPJ_G0032477.1 mouse_genomes_project 7 104705810 104718503 + MGP_LPJ_P0084982 Ucp3 protein_coding protein_coding MGP_LPJ_T0084983.1 MGP_LPJ_G0032477.1 mouse_genomes_project 7 104705811 104718606 + Ucp3 protein_coding retained_intron MGP_LPJ_T0081239.1 MGP_LPJ_G0031484.1 mouse_genomes_project 7 2095035 2099045 - MGP_LPJ_P0081239 Zfp784 protein_coding protein_coding MGP_LPJ_T0085614.1 MGP_LPJ_G0032763.1 mouse_genomes_project 7 114698707 114706679 - MGP_LPJ_P0085614 Ascl3 protein_coding protein_coding MGP_LPJ_T0087677.1 MGP_LPJ_G0033205.1 mouse_genomes_project 7 151470149 151475333 - MGP_LPJ_P0087677 Fadd protein_coding protein_coding MGP_LPJ_T0008888.1 MGP_LPJ_G0007179.1 mouse_genomes_project 7 53461877 53484563 - Gm29296 lincRNA lincRNA MGP_LPJ_T0080967.1 MGP_LPJ_G0031427.1 mouse_genomes_project 7 549589 552512 + MGP_LPJ_P0080967 Ndufa3 protein_coding protein_coding MGP_LPJ_T0080968.1 MGP_LPJ_G0031427.1 mouse_genomes_project 7 549596 552337 + Ndufa3 protein_coding retained_intron MGP_LPJ_T0080969.1 MGP_LPJ_G0031427.1 mouse_genomes_project 7 549601 549922 + Ndufa3 protein_coding retained_intron MGP_LPJ_T0080970.1 MGP_LPJ_G0031427.1 mouse_genomes_project 7 549602 552313 + MGP_LPJ_P0080970 Ndufa3 protein_coding protein_coding MGP_LPJ_T0080971.1 MGP_LPJ_G0031427.1 mouse_genomes_project 7 549607 552348 + MGP_LPJ_P0080971 Ndufa3 protein_coding nonsense_mediated_decay MGP_LPJ_T0080972.1 MGP_LPJ_G0031427.1 mouse_genomes_project 7 549833 552270 + MGP_LPJ_P0080972 Ndufa3 protein_coding nonsense_mediated_decay MGP_LPJ_T0083493.1 MGP_LPJ_G0032114.1 mouse_genomes_project 7 46101488 46102332 + MGP_LPJ_P0083493 Pth2 protein_coding protein_coding MGP_LPJ_T0101002.1 MGP_LPJ_G0039265.1 mouse_genomes_project 7 148068071 148068201 - Gm25725 snoRNA snoRNA MGP_LPJ_T0083681.1 MGP_LPJ_G0032159.1 mouse_genomes_project 7 46904011 46917246 + MGP_LPJ_P0083681 Kdelr1 protein_coding protein_coding MGP_LPJ_T0083682.1 MGP_LPJ_G0032159.1 mouse_genomes_project 7 46906395 46907874 + Kdelr1 protein_coding processed_transcript MGP_LPJ_T0083683.1 MGP_LPJ_G0032159.1 mouse_genomes_project 7 46914949 46916865 + Kdelr1 protein_coding processed_transcript MGP_LPJ_T0085134.1 MGP_LPJ_G0032502.1 mouse_genomes_project 7 106247889 106256707 - MGP_LPJ_P0085134 Lrrc51 protein_coding protein_coding MGP_LPJ_T0085135.1 MGP_LPJ_G0032502.1 mouse_genomes_project 7 106247894 106256269 - MGP_LPJ_P0085135 Lrrc51 protein_coding protein_coding MGP_LPJ_T0085136.1 MGP_LPJ_G0032502.1 mouse_genomes_project 7 106247894 106256720 - MGP_LPJ_P0085136 Lrrc51 protein_coding protein_coding MGP_LPJ_T0085137.1 MGP_LPJ_G0032502.1 mouse_genomes_project 7 106247895 106272304 - MGP_LPJ_P0085137 Lrrc51 protein_coding protein_coding MGP_LPJ_T0085138.1 MGP_LPJ_G0032502.1 mouse_genomes_project 7 106247895 106272366 - MGP_LPJ_P0085138 Lrrc51 protein_coding protein_coding MGP_LPJ_T0085139.1 MGP_LPJ_G0032502.1 mouse_genomes_project 7 106247895 106256694 - MGP_LPJ_P0085139 Lrrc51 protein_coding protein_coding MGP_LPJ_T0085140.1 MGP_LPJ_G0032502.1 mouse_genomes_project 7 106247899 106256678 - MGP_LPJ_P0085140 Lrrc51 protein_coding protein_coding MGP_LPJ_T0085141.1 MGP_LPJ_G0032502.1 mouse_genomes_project 7 106247906 106272393 - Lrrc51 protein_coding processed_transcript MGP_LPJ_T0085142.1 MGP_LPJ_G0032502.1 mouse_genomes_project 7 106248063 106272300 - MGP_LPJ_P0085142 Lrrc51 protein_coding protein_coding MGP_LPJ_T0085143.1 MGP_LPJ_G0032502.1 mouse_genomes_project 7 106248079 106272328 - MGP_LPJ_P0085143 Lrrc51 protein_coding protein_coding MGP_LPJ_T0102290.1 MGP_LPJ_G0040327.1 mouse_genomes_project 7 1283086 1290642 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0082609.1 MGP_LPJ_G0031906.1 mouse_genomes_project 7 29484248 29486089 + MGP_LPJ_P0082609 Cox7a1 protein_coding protein_coding MGP_LPJ_T0010946.1 MGP_LPJ_G0009064.1 mouse_genomes_project 7 134177492 134177559 - Mir3103 miRNA miRNA MGP_LPJ_T0008821.1 MGP_LPJ_G0007125.1 mouse_genomes_project 7 17609503 17611847 - Gm26802 lincRNA lincRNA MGP_LPJ_T0010943.1 MGP_LPJ_G0009061.1 mouse_genomes_project 7 133324198 133324335 + Mir7060 miRNA miRNA MGP_LPJ_T0084701.1 MGP_LPJ_G0032410.1 mouse_genomes_project 7 93625516 93626602 + MGP_LPJ_P0084701 protein_coding protein_coding MGP_LPJ_T0008992.1 MGP_LPJ_G0007250.1 mouse_genomes_project 7 103966414 103967949 - F730035P03Rik lincRNA lincRNA MGP_LPJ_T0084085.1 MGP_LPJ_G0032260.1 mouse_genomes_project 7 69140272 69165753 + MGP_LPJ_P0084085 Lins1 protein_coding protein_coding MGP_LPJ_T0084086.1 MGP_LPJ_G0032260.1 mouse_genomes_project 7 69140277 69172145 + MGP_LPJ_P0084086 Lins1 protein_coding protein_coding MGP_LPJ_T0084087.1 MGP_LPJ_G0032260.1 mouse_genomes_project 7 69140283 69165617 + MGP_LPJ_P0084087 Lins1 protein_coding protein_coding MGP_LPJ_T0084088.1 MGP_LPJ_G0032260.1 mouse_genomes_project 7 69140332 69167298 + Lins1 protein_coding retained_intron MGP_LPJ_T0084089.1 MGP_LPJ_G0032260.1 mouse_genomes_project 7 69140341 69174654 + MGP_LPJ_P0084089 Lins1 protein_coding nonsense_mediated_decay MGP_LPJ_T0084090.1 MGP_LPJ_G0032260.1 mouse_genomes_project 7 69140341 69172142 + MGP_LPJ_P0084090 Lins1 protein_coding protein_coding MGP_LPJ_T0084091.1 MGP_LPJ_G0032260.1 mouse_genomes_project 7 69140354 69172145 + MGP_LPJ_P0084091 Lins1 protein_coding nonsense_mediated_decay MGP_LPJ_T0084092.1 MGP_LPJ_G0032260.1 mouse_genomes_project 7 69165425 69172085 + MGP_LPJ_P0084092 Lins1 protein_coding nonsense_mediated_decay MGP_LPJ_T0084093.1 MGP_LPJ_G0032260.1 mouse_genomes_project 7 69165573 69167771 + MGP_LPJ_P0084093 Lins1 protein_coding protein_coding MGP_LPJ_T0084094.1 MGP_LPJ_G0032260.1 mouse_genomes_project 7 69165718 69167960 + MGP_LPJ_P0084094 Lins1 protein_coding protein_coding MGP_LPJ_T0084095.1 MGP_LPJ_G0032260.1 mouse_genomes_project 7 69166804 69171248 + MGP_LPJ_P0084095 Lins1 protein_coding nonsense_mediated_decay MGP_LPJ_T0084096.1 MGP_LPJ_G0032260.1 mouse_genomes_project 7 69167541 69174652 + Lins1 protein_coding retained_intron MGP_LPJ_T0101597.1 MGP_LPJ_G0039679.1 mouse_genomes_project 7 684986 794457 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0101598.1 MGP_LPJ_G0039679.1 mouse_genomes_project 7 697599 705909 - transcribed_unprocessed_pseudogene retained_intron MGP_LPJ_T0015707.1 MGP_LPJ_G0013798.1 mouse_genomes_project 7 30028960 30029488 + processed_pseudogene processed_pseudogene MGP_LPJ_T0083187.1 MGP_LPJ_G0032023.1 mouse_genomes_project 7 44180240 44181480 + MGP_LPJ_P0083187 Gm38999 protein_coding protein_coding MGP_LPJ_T0087668.1 MGP_LPJ_G0033204.1 mouse_genomes_project 7 151364884 151379896 - Ppfia1 protein_coding retained_intron MGP_LPJ_T0087669.1 MGP_LPJ_G0033204.1 mouse_genomes_project 7 151364891 151403451 - MGP_LPJ_P0087669 Ppfia1 protein_coding nonsense_mediated_decay MGP_LPJ_T0087670.1 MGP_LPJ_G0033204.1 mouse_genomes_project 7 151367401 151444635 - MGP_LPJ_P0087670 Ppfia1 protein_coding protein_coding MGP_LPJ_T0087671.1 MGP_LPJ_G0033204.1 mouse_genomes_project 7 151367511 151443443 - MGP_LPJ_P0087671 Ppfia1 protein_coding protein_coding MGP_LPJ_T0087672.1 MGP_LPJ_G0033204.1 mouse_genomes_project 7 151372960 151377325 - Ppfia1 protein_coding processed_transcript MGP_LPJ_T0087673.1 MGP_LPJ_G0033204.1 mouse_genomes_project 7 151389401 151391062 - Ppfia1 protein_coding retained_intron MGP_LPJ_T0087674.1 MGP_LPJ_G0033204.1 mouse_genomes_project 7 151396707 151399470 - Ppfia1 protein_coding retained_intron MGP_LPJ_T0087675.1 MGP_LPJ_G0033204.1 mouse_genomes_project 7 151409424 151443268 - MGP_LPJ_P0087675 Ppfia1 protein_coding nonsense_mediated_decay MGP_LPJ_T0087676.1 MGP_LPJ_G0033204.1 mouse_genomes_project 7 151410449 151414524 - Ppfia1 protein_coding retained_intron MGP_LPJ_T0102449.1 MGP_LPJ_G0040485.1 mouse_genomes_project 7 108361967 108363055 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0085320.1 MGP_LPJ_G0032619.1 mouse_genomes_project 7 108776058 108788664 + Trim6 protein_coding retained_intron MGP_LPJ_T0085321.1 MGP_LPJ_G0032619.1 mouse_genomes_project 7 108776060 108794933 + MGP_LPJ_P0085321 Trim6 protein_coding protein_coding MGP_LPJ_T0085322.1 MGP_LPJ_G0032619.1 mouse_genomes_project 7 108776102 108787041 + MGP_LPJ_P0085322 Trim6 protein_coding protein_coding MGP_LPJ_T0085323.1 MGP_LPJ_G0032619.1 mouse_genomes_project 7 108776694 108787078 + MGP_LPJ_P0085323 Trim6 protein_coding protein_coding MGP_LPJ_T0085324.1 MGP_LPJ_G0032619.1 mouse_genomes_project 7 108782316 108787961 + MGP_LPJ_P0085324 Trim6 protein_coding protein_coding MGP_LPJ_T0085325.1 MGP_LPJ_G0032619.1 mouse_genomes_project 7 108786651 108792818 + MGP_LPJ_P0085325 Trim6 protein_coding protein_coding MGP_LPJ_T0015652.1 MGP_LPJ_G0013743.1 mouse_genomes_project 7 3103644 3104593 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011697.1 MGP_LPJ_G0009815.1 mouse_genomes_project 7 40377686 40377958 + Gm24910 misc_RNA misc_RNA MGP_LPJ_T0086385.1 MGP_LPJ_G0032920.1 mouse_genomes_project 7 132619981 132622091 + MGP_LPJ_P0086385 Doc2a protein_coding protein_coding MGP_LPJ_T0086386.1 MGP_LPJ_G0032920.1 mouse_genomes_project 7 132620118 132625271 + MGP_LPJ_P0086386 Doc2a protein_coding protein_coding MGP_LPJ_T0086387.1 MGP_LPJ_G0032920.1 mouse_genomes_project 7 132620203 132621318 + Doc2a protein_coding processed_transcript MGP_LPJ_T0086388.1 MGP_LPJ_G0032920.1 mouse_genomes_project 7 132620263 132621258 + MGP_LPJ_P0086388 Doc2a protein_coding protein_coding MGP_LPJ_T0086389.1 MGP_LPJ_G0032920.1 mouse_genomes_project 7 132620291 132623905 + MGP_LPJ_P0086389 Doc2a protein_coding protein_coding MGP_LPJ_T0086390.1 MGP_LPJ_G0032920.1 mouse_genomes_project 7 132620492 132621402 + MGP_LPJ_P0086390 Doc2a protein_coding protein_coding MGP_LPJ_T0086391.1 MGP_LPJ_G0032920.1 mouse_genomes_project 7 132620527 132621401 + MGP_LPJ_P0086391 Doc2a protein_coding protein_coding MGP_LPJ_T0086392.1 MGP_LPJ_G0032920.1 mouse_genomes_project 7 132620820 132622326 + MGP_LPJ_P0086392 Doc2a protein_coding protein_coding MGP_LPJ_T0086393.1 MGP_LPJ_G0032920.1 mouse_genomes_project 7 132621362 132624602 + MGP_LPJ_P0086393 Doc2a protein_coding nonsense_mediated_decay MGP_LPJ_T0002346.1 MGP_LPJ_G0002254.1 mouse_genomes_project 7 150118663 150122583 + TEC TEC MGP_LPJ_T0085292.1 MGP_LPJ_G0032593.1 mouse_genomes_project 7 108370083 108371331 - MGP_LPJ_P0085292 Hbb-bh2 protein_coding protein_coding MGP_LPJ_T0005215.1 MGP_LPJ_G0004440.1 mouse_genomes_project 7 30349105 30349891 + Gm4673 antisense antisense MGP_LPJ_T0005216.1 MGP_LPJ_G0004440.1 mouse_genomes_project 7 30349445 30353656 + Gm4673 antisense antisense MGP_LPJ_T0005227.1 MGP_LPJ_G0004449.1 mouse_genomes_project 7 35557250 35594885 + E130304I02Rik antisense antisense MGP_LPJ_T0005228.1 MGP_LPJ_G0004449.1 mouse_genomes_project 7 35557251 35557686 + E130304I02Rik antisense antisense MGP_LPJ_T0018318.1 MGP_LPJ_G0015588.1 mouse_genomes_project 7 57846145 57847080 + Gm15888 processed_transcript processed_transcript MGP_LPJ_T0011717.1 MGP_LPJ_G0009835.1 mouse_genomes_project 7 150094504 150094623 + Gm27803 misc_RNA misc_RNA MGP_LPJ_T0086631.1 MGP_LPJ_G0032968.1 mouse_genomes_project 7 133590541 133595552 + MGP_LPJ_P0086631 Fbxl19 protein_coding protein_coding MGP_LPJ_T0086632.1 MGP_LPJ_G0032968.1 mouse_genomes_project 7 133591199 133614607 + MGP_LPJ_P0086632 Fbxl19 protein_coding protein_coding MGP_LPJ_T0086633.1 MGP_LPJ_G0032968.1 mouse_genomes_project 7 133591768 133595555 + MGP_LPJ_P0086633 Fbxl19 protein_coding protein_coding MGP_LPJ_T0086634.1 MGP_LPJ_G0032968.1 mouse_genomes_project 7 133591784 133615156 + MGP_LPJ_P0086634 Fbxl19 protein_coding protein_coding MGP_LPJ_T0086635.1 MGP_LPJ_G0032968.1 mouse_genomes_project 7 133592612 133614608 + MGP_LPJ_P0086635 Fbxl19 protein_coding protein_coding MGP_LPJ_T0086636.1 MGP_LPJ_G0032968.1 mouse_genomes_project 7 133593984 133614407 + MGP_LPJ_P0086636 Fbxl19 protein_coding protein_coding MGP_LPJ_T0086637.1 MGP_LPJ_G0032968.1 mouse_genomes_project 7 133594111 133615163 + MGP_LPJ_P0086637 Fbxl19 protein_coding protein_coding MGP_LPJ_T0015795.1 MGP_LPJ_G0013886.1 mouse_genomes_project 7 83438408 83439538 - processed_pseudogene processed_pseudogene MGP_LPJ_T0084581.1 MGP_LPJ_G0032353.1 mouse_genomes_project 7 86943492 86950173 - MGP_LPJ_P0084581 protein_coding protein_coding MGP_LPJ_T0015753.1 MGP_LPJ_G0013844.1 mouse_genomes_project 7 46844174 46849241 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002225.1 MGP_LPJ_G0002134.1 mouse_genomes_project 7 17146378 17147615 + TEC TEC MGP_LPJ_T0100983.1 MGP_LPJ_G0039246.1 mouse_genomes_project 7 107134482 107134615 - Gm24210 snoRNA snoRNA MGP_LPJ_T0015779.1 MGP_LPJ_G0013870.1 mouse_genomes_project 7 70285043 70286034 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005659.1 MGP_LPJ_G0004765.1 mouse_genomes_project 7 68296086 68297073 - Gm20684 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_LPJ_T0083413.1 MGP_LPJ_G0032087.1 mouse_genomes_project 7 45731385 45739395 - Tbc1d17 protein_coding retained_intron MGP_LPJ_T0083414.1 MGP_LPJ_G0032087.1 mouse_genomes_project 7 45731508 45739559 - MGP_LPJ_P0083414 Tbc1d17 protein_coding protein_coding MGP_LPJ_T0083415.1 MGP_LPJ_G0032087.1 mouse_genomes_project 7 45731516 45739563 - MGP_LPJ_P0083415 Tbc1d17 protein_coding nonsense_mediated_decay MGP_LPJ_T0083416.1 MGP_LPJ_G0032087.1 mouse_genomes_project 7 45731517 45739374 - Tbc1d17 protein_coding retained_intron MGP_LPJ_T0083417.1 MGP_LPJ_G0032087.1 mouse_genomes_project 7 45733863 45734808 - Tbc1d17 protein_coding retained_intron MGP_LPJ_T0083418.1 MGP_LPJ_G0032087.1 mouse_genomes_project 7 45735060 45736484 - Tbc1d17 protein_coding retained_intron MGP_LPJ_T0083419.1 MGP_LPJ_G0032087.1 mouse_genomes_project 7 45738509 45739379 - Tbc1d17 protein_coding retained_intron MGP_LPJ_T0083420.1 MGP_LPJ_G0032087.1 mouse_genomes_project 7 45738758 45739078 - Tbc1d17 protein_coding retained_intron MGP_LPJ_T0015815.1 MGP_LPJ_G0013906.1 mouse_genomes_project 7 99888024 99888608 - processed_pseudogene processed_pseudogene MGP_LPJ_T0081337.1 MGP_LPJ_G0031536.1 mouse_genomes_project 7 9237615 9238530 + MGP_LPJ_P0081337 Vmn1r74 protein_coding protein_coding MGP_LPJ_T0081318.1 MGP_LPJ_G0031521.1 mouse_genomes_project 7 4371326 4377281 - MGP_LPJ_P0081318 Zfp773 protein_coding protein_coding MGP_LPJ_T0002329.1 MGP_LPJ_G0002237.1 mouse_genomes_project 7 130986314 130987474 + TEC TEC MGP_LPJ_T0081897.1 MGP_LPJ_G0031725.1 mouse_genomes_project 7 22947048 22955862 - MGP_LPJ_P0081897 Zfp61 protein_coding protein_coding MGP_LPJ_T0081898.1 MGP_LPJ_G0031725.1 mouse_genomes_project 7 22947066 22952127 - MGP_LPJ_P0081898 Zfp61 protein_coding protein_coding MGP_LPJ_T0081899.1 MGP_LPJ_G0031725.1 mouse_genomes_project 7 22948028 22951857 - Zfp61 protein_coding processed_transcript MGP_LPJ_T0081900.1 MGP_LPJ_G0031725.1 mouse_genomes_project 7 22948171 22955497 - MGP_LPJ_P0081900 Zfp61 protein_coding protein_coding MGP_LPJ_T0081901.1 MGP_LPJ_G0031725.1 mouse_genomes_project 7 22949480 22951694 - Zfp61 protein_coding retained_intron MGP_LPJ_T0081902.1 MGP_LPJ_G0031725.1 mouse_genomes_project 7 22951216 22955485 - Zfp61 protein_coding processed_transcript MGP_LPJ_T0081903.1 MGP_LPJ_G0031725.1 mouse_genomes_project 7 22951459 22955588 - Zfp61 protein_coding retained_intron MGP_LPJ_T0081904.1 MGP_LPJ_G0031725.1 mouse_genomes_project 7 22953763 22961420 - Zfp61 protein_coding processed_transcript MGP_LPJ_T0081905.1 MGP_LPJ_G0031725.1 mouse_genomes_project 7 22954226 22955824 - Zfp61 protein_coding retained_intron MGP_LPJ_T0008997.1 MGP_LPJ_G0007253.1 mouse_genomes_project 7 113912550 113923328 - Gm26599 lincRNA lincRNA MGP_LPJ_T0005186.1 MGP_LPJ_G0004416.1 mouse_genomes_project 7 18171980 18174245 + Gm16175 antisense antisense MGP_LPJ_T0084302.1 MGP_LPJ_G0032296.1 mouse_genomes_project 7 82738479 82764086 - MGP_LPJ_P0084302 Rhcg protein_coding protein_coding MGP_LPJ_T0084303.1 MGP_LPJ_G0032296.1 mouse_genomes_project 7 82738485 82740046 - MGP_LPJ_P0084303 Rhcg protein_coding protein_coding MGP_LPJ_T0084304.1 MGP_LPJ_G0032296.1 mouse_genomes_project 7 82750179 82754286 - MGP_LPJ_P0084304 Rhcg protein_coding protein_coding MGP_LPJ_T0102351.1 MGP_LPJ_G0040387.1 mouse_genomes_project 7 33342010 33343773 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0086929.1 MGP_LPJ_G0033027.1 mouse_genomes_project 7 138413522 138501102 - MGP_LPJ_P0086929 Chst15 protein_coding protein_coding MGP_LPJ_T0086930.1 MGP_LPJ_G0033027.1 mouse_genomes_project 7 138413522 138500595 - MGP_LPJ_P0086930 Chst15 protein_coding protein_coding MGP_LPJ_T0086931.1 MGP_LPJ_G0033027.1 mouse_genomes_project 7 138413550 138455210 - MGP_LPJ_P0086931 Chst15 protein_coding unknown_likely_coding MGP_LPJ_T0086932.1 MGP_LPJ_G0033027.1 mouse_genomes_project 7 138452347 138461470 - Chst15 protein_coding processed_transcript MGP_LPJ_T0082776.1 MGP_LPJ_G0031940.1 mouse_genomes_project 7 29994661 29995543 - MGP_LPJ_P0082776 Pmis2 protein_coding protein_coding MGP_LPJ_T0082777.1 MGP_LPJ_G0031940.1 mouse_genomes_project 7 29994696 29995538 - Pmis2 protein_coding processed_transcript MGP_LPJ_T0083489.1 MGP_LPJ_G0032111.1 mouse_genomes_project 7 46073140 46080603 + MGP_LPJ_P0083489 Pih1d1 protein_coding protein_coding MGP_LPJ_T0083490.1 MGP_LPJ_G0032111.1 mouse_genomes_project 7 46074690 46080603 + MGP_LPJ_P0083490 Pih1d1 protein_coding protein_coding MGP_LPJ_T0084054.1 MGP_LPJ_G0032253.1 mouse_genomes_project 7 68493824 68509179 + Snrpa1 protein_coding processed_transcript MGP_LPJ_T0084055.1 MGP_LPJ_G0032253.1 mouse_genomes_project 7 68495120 68504366 + Snrpa1 protein_coding processed_transcript MGP_LPJ_T0084056.1 MGP_LPJ_G0032253.1 mouse_genomes_project 7 68495159 68509423 + MGP_LPJ_P0084056 Snrpa1 protein_coding protein_coding MGP_LPJ_T0084057.1 MGP_LPJ_G0032253.1 mouse_genomes_project 7 68495353 68509212 + Snrpa1 protein_coding processed_transcript MGP_LPJ_T0084058.1 MGP_LPJ_G0032253.1 mouse_genomes_project 7 68495365 68509416 + MGP_LPJ_P0084058 Snrpa1 protein_coding nonsense_mediated_decay MGP_LPJ_T0084059.1 MGP_LPJ_G0032253.1 mouse_genomes_project 7 68495385 68506449 + Snrpa1 protein_coding retained_intron MGP_LPJ_T0084060.1 MGP_LPJ_G0032253.1 mouse_genomes_project 7 68495424 68509206 + Snrpa1 protein_coding processed_transcript MGP_LPJ_T0084061.1 MGP_LPJ_G0032253.1 mouse_genomes_project 7 68495602 68496988 + Snrpa1 protein_coding processed_transcript MGP_LPJ_T0084062.1 MGP_LPJ_G0032253.1 mouse_genomes_project 7 68503691 68504363 + Snrpa1 protein_coding retained_intron MGP_LPJ_T0100957.1 MGP_LPJ_G0039220.1 mouse_genomes_project 7 46342597 46342751 + Gm22478 snoRNA snoRNA MGP_LPJ_T0080943.1 MGP_LPJ_G0031420.1 mouse_genomes_project 7 186552 195944 + MGP_LPJ_P0080943 Myadm protein_coding protein_coding MGP_LPJ_T0080945.1 MGP_LPJ_G0031420.1 mouse_genomes_project 7 188001 197010 + MGP_LPJ_P0080945 Myadm protein_coding protein_coding MGP_LPJ_T0080946.1 MGP_LPJ_G0031420.1 mouse_genomes_project 7 188042 198101 + MGP_LPJ_P0080946 Myadm protein_coding protein_coding MGP_LPJ_T0080947.1 MGP_LPJ_G0031420.1 mouse_genomes_project 7 188946 194658 + MGP_LPJ_P0080947 Myadm protein_coding protein_coding MGP_LPJ_T0080948.1 MGP_LPJ_G0031420.1 mouse_genomes_project 7 190583 196983 + MGP_LPJ_P0080948 Myadm protein_coding protein_coding MGP_LPJ_T0085921.1 MGP_LPJ_G0032826.1 mouse_genomes_project 7 124808977 124830718 - MGP_LPJ_P0085921 Gp2 protein_coding protein_coding MGP_LPJ_T0085261.1 MGP_LPJ_G0032565.1 mouse_genomes_project 7 107898052 107898997 - MGP_LPJ_P0085261 protein_coding protein_coding MGP_LPJ_T0084330.1 MGP_LPJ_G0032304.1 mouse_genomes_project 7 82989742 83014987 - MGP_LPJ_P0084330 Anpep protein_coding protein_coding MGP_LPJ_T0084331.1 MGP_LPJ_G0032304.1 mouse_genomes_project 7 82989743 82993439 - Anpep protein_coding retained_intron MGP_LPJ_T0084332.1 MGP_LPJ_G0032304.1 mouse_genomes_project 7 82989743 83009129 - MGP_LPJ_P0084332 Anpep protein_coding protein_coding MGP_LPJ_T0084333.1 MGP_LPJ_G0032304.1 mouse_genomes_project 7 82990203 83014960 - MGP_LPJ_P0084333 Anpep protein_coding protein_coding MGP_LPJ_T0084334.1 MGP_LPJ_G0032304.1 mouse_genomes_project 7 83008832 83027788 - MGP_LPJ_P0084334 Anpep protein_coding protein_coding MGP_LPJ_T0084335.1 MGP_LPJ_G0032304.1 mouse_genomes_project 7 83009390 83014970 - Anpep protein_coding processed_transcript MGP_LPJ_T0083134.1 MGP_LPJ_G0032005.1 mouse_genomes_project 7 39153572 39171692 - MGP_LPJ_P0083134 protein_coding protein_coding MGP_LPJ_T0086158.1 MGP_LPJ_G0032886.1 mouse_genomes_project 7 131288587 131316236 + MGP_LPJ_P0086158 Il21r protein_coding nonsense_mediated_decay MGP_LPJ_T0086159.1 MGP_LPJ_G0032886.1 mouse_genomes_project 7 131307373 131317721 + MGP_LPJ_P0086159 Il21r protein_coding protein_coding MGP_LPJ_T0083853.1 MGP_LPJ_G0032210.1 mouse_genomes_project 7 52237728 52239069 + MGP_LPJ_P0083853 4933405O20Rik protein_coding protein_coding MGP_LPJ_T0087089.1 MGP_LPJ_G0033065.1 mouse_genomes_project 7 145804151 145822909 + MGP_LPJ_P0087089 Pwwp2b protein_coding protein_coding MGP_LPJ_T0087090.1 MGP_LPJ_G0033065.1 mouse_genomes_project 7 145804151 145822909 + MGP_LPJ_P0087090 Pwwp2b protein_coding protein_coding MGP_LPJ_T0002325.1 MGP_LPJ_G0002233.1 mouse_genomes_project 7 128121663 128123012 + TEC TEC MGP_LPJ_T0087214.1 MGP_LPJ_G0033114.1 mouse_genomes_project 7 147518943 147537824 + MGP_LPJ_P0087214 Psmd13 protein_coding protein_coding MGP_LPJ_T0087215.1 MGP_LPJ_G0033114.1 mouse_genomes_project 7 147519389 147537094 + Psmd13 protein_coding retained_intron MGP_LPJ_T0087216.1 MGP_LPJ_G0033114.1 mouse_genomes_project 7 147519404 147524241 + Psmd13 protein_coding processed_transcript MGP_LPJ_T0087217.1 MGP_LPJ_G0033114.1 mouse_genomes_project 7 147519413 147523839 + Psmd13 protein_coding processed_transcript MGP_LPJ_T0087218.1 MGP_LPJ_G0033114.1 mouse_genomes_project 7 147519427 147526695 + Psmd13 protein_coding processed_transcript MGP_LPJ_T0087219.1 MGP_LPJ_G0033114.1 mouse_genomes_project 7 147519442 147524154 + Psmd13 protein_coding retained_intron MGP_LPJ_T0087220.1 MGP_LPJ_G0033114.1 mouse_genomes_project 7 147519447 147537470 + MGP_LPJ_P0087220 Psmd13 protein_coding protein_coding MGP_LPJ_T0087221.1 MGP_LPJ_G0033114.1 mouse_genomes_project 7 147519447 147537470 + MGP_LPJ_P0087221 Psmd13 protein_coding nonsense_mediated_decay MGP_LPJ_T0087222.1 MGP_LPJ_G0033114.1 mouse_genomes_project 7 147519447 147537415 + MGP_LPJ_P0087222 Psmd13 protein_coding protein_coding MGP_LPJ_T0087223.1 MGP_LPJ_G0033114.1 mouse_genomes_project 7 147520475 147523407 + Psmd13 protein_coding processed_transcript MGP_LPJ_T0087224.1 MGP_LPJ_G0033114.1 mouse_genomes_project 7 147526375 147537577 + MGP_LPJ_P0087224 Psmd13 protein_coding protein_coding MGP_LPJ_T0087225.1 MGP_LPJ_G0033114.1 mouse_genomes_project 7 147527364 147537022 + Psmd13 protein_coding retained_intron MGP_LPJ_T0087226.1 MGP_LPJ_G0033114.1 mouse_genomes_project 7 147533252 147537825 + MGP_LPJ_P0087226 Psmd13 protein_coding protein_coding MGP_LPJ_T0015805.1 MGP_LPJ_G0013896.1 mouse_genomes_project 7 89816775 89817025 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011701.1 MGP_LPJ_G0009819.1 mouse_genomes_project 7 78179345 78179668 + Gm24858 misc_RNA misc_RNA MGP_LPJ_T0102447.1 MGP_LPJ_G0040483.1 mouse_genomes_project 7 108146130 108244366 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0084602.1 MGP_LPJ_G0032359.1 mouse_genomes_project 7 87304098 87308601 - MGP_LPJ_P0084602 Mesdc1 protein_coding protein_coding MGP_LPJ_T0082253.1 MGP_LPJ_G0031813.1 mouse_genomes_project 7 26327909 26373182 - MGP_LPJ_P0082253 Sptbn4 protein_coding protein_coding MGP_LPJ_T0082254.1 MGP_LPJ_G0031813.1 mouse_genomes_project 7 26327909 26377614 - MGP_LPJ_P0082254 Sptbn4 protein_coding protein_coding MGP_LPJ_T0082255.1 MGP_LPJ_G0031813.1 mouse_genomes_project 7 26327909 26377259 - MGP_LPJ_P0082255 Sptbn4 protein_coding protein_coding MGP_LPJ_T0082256.1 MGP_LPJ_G0031813.1 mouse_genomes_project 7 26327909 26434527 - MGP_LPJ_P0082256 Sptbn4 protein_coding protein_coding MGP_LPJ_T0082257.1 MGP_LPJ_G0031813.1 mouse_genomes_project 7 26327913 26435598 - MGP_LPJ_P0082257 Sptbn4 protein_coding protein_coding MGP_LPJ_T0082258.1 MGP_LPJ_G0031813.1 mouse_genomes_project 7 26421900 26435598 - MGP_LPJ_P0082258 Sptbn4 protein_coding protein_coding MGP_LPJ_T0082259.1 MGP_LPJ_G0031813.1 mouse_genomes_project 7 26433880 26434445 - Sptbn4 protein_coding processed_transcript MGP_LPJ_T0005345.1 MGP_LPJ_G0004533.1 mouse_genomes_project 7 151458195 151474382 + Faddos antisense antisense MGP_LPJ_T0085974.1 MGP_LPJ_G0032843.1 mouse_genomes_project 7 125594048 125610186 - MGP_LPJ_P0085974 Crym protein_coding protein_coding MGP_LPJ_T0085975.1 MGP_LPJ_G0032843.1 mouse_genomes_project 7 125604743 125610186 - Crym protein_coding retained_intron MGP_LPJ_T0087238.1 MGP_LPJ_G0033118.1 mouse_genomes_project 7 147590876 147592153 - MGP_LPJ_P0087238 Ifitm5 protein_coding protein_coding MGP_LPJ_T0086092.1 MGP_LPJ_G0032874.1 mouse_genomes_project 7 128208571 128316341 + MGP_LPJ_P0086092 Cacng3 protein_coding protein_coding MGP_LPJ_T0086093.1 MGP_LPJ_G0032874.1 mouse_genomes_project 7 128209470 128315369 + MGP_LPJ_P0086093 Cacng3 protein_coding protein_coding MGP_LPJ_T0086094.1 MGP_LPJ_G0032874.1 mouse_genomes_project 7 128209497 128315488 + MGP_LPJ_P0086094 Cacng3 protein_coding protein_coding MGP_LPJ_T0083970.1 MGP_LPJ_G0032238.1 mouse_genomes_project 7 66225764 66293543 - MGP_LPJ_P0083970 Klf13 protein_coding protein_coding MGP_LPJ_T0083971.1 MGP_LPJ_G0032238.1 mouse_genomes_project 7 66235479 66290609 - MGP_LPJ_P0083971 Klf13 protein_coding protein_coding MGP_LPJ_T0083972.1 MGP_LPJ_G0032238.1 mouse_genomes_project 7 66235496 66273960 - MGP_LPJ_P0083972 Klf13 protein_coding protein_coding MGP_LPJ_T0083974.1 MGP_LPJ_G0032238.1 mouse_genomes_project 7 66289706 66290640 - Klf13 protein_coding retained_intron MGP_LPJ_T0081370.1 MGP_LPJ_G0031556.1 mouse_genomes_project 7 10365373 10376838 + Zfp128 protein_coding retained_intron MGP_LPJ_T0081371.1 MGP_LPJ_G0031556.1 mouse_genomes_project 7 10365373 10378395 + MGP_LPJ_P0081371 Zfp128 protein_coding protein_coding MGP_LPJ_T0102338.1 MGP_LPJ_G0040374.1 mouse_genomes_project 7 25067881 25068428 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0084555.1 MGP_LPJ_G0032346.1 mouse_genomes_project 7 85287286 85312893 - MGP_LPJ_P0084555 Bnc1 protein_coding protein_coding MGP_LPJ_T0005320.1 MGP_LPJ_G0004512.1 mouse_genomes_project 7 133396620 133411123 - Gm28198 antisense antisense MGP_LPJ_T0098664.1 MGP_LPJ_G0036934.1 mouse_genomes_project 7 3593148 3593731 + Gm16306 sense_intronic sense_intronic MGP_LPJ_T0085535.1 MGP_LPJ_G0032713.1 mouse_genomes_project 7 112687137 112696715 - MGP_LPJ_P0085535 Cyb5r2 protein_coding protein_coding MGP_LPJ_T0085536.1 MGP_LPJ_G0032713.1 mouse_genomes_project 7 112688906 112695945 - MGP_LPJ_P0085536 Cyb5r2 protein_coding unknown_likely_coding MGP_LPJ_T0102423.1 MGP_LPJ_G0040459.1 mouse_genomes_project 7 89203381 89204294 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0087164.1 MGP_LPJ_G0033084.1 mouse_genomes_project 7 146793934 146795010 - MGP_LPJ_P0087164 Olfr522 protein_coding protein_coding MGP_LPJ_T0008937.1 MGP_LPJ_G0007217.1 mouse_genomes_project 7 76583105 76618954 - Gm10619 lincRNA lincRNA MGP_LPJ_T0008938.1 MGP_LPJ_G0007217.1 mouse_genomes_project 7 76610744 76619026 - Gm10619 lincRNA lincRNA MGP_LPJ_T0081864.1 MGP_LPJ_G0031710.1 mouse_genomes_project 7 22039070 22040001 - MGP_LPJ_P0081864 protein_coding protein_coding MGP_LPJ_T0015746.1 MGP_LPJ_G0013837.1 mouse_genomes_project 7 44129689 44129954 - processed_pseudogene processed_pseudogene MGP_LPJ_T0081526.1 MGP_LPJ_G0031605.1 mouse_genomes_project 7 14183412 14195689 - MGP_LPJ_P0081526 C5ar1 protein_coding protein_coding MGP_LPJ_T0081527.1 MGP_LPJ_G0031605.1 mouse_genomes_project 7 14183414 14195487 - MGP_LPJ_P0081527 C5ar1 protein_coding protein_coding MGP_LPJ_T0081945.1 MGP_LPJ_G0031737.1 mouse_genomes_project 7 23237198 23266074 + MGP_LPJ_P0081945 Xrcc1 protein_coding protein_coding MGP_LPJ_T0081946.1 MGP_LPJ_G0031737.1 mouse_genomes_project 7 23238059 23266077 + MGP_LPJ_P0081946 Xrcc1 protein_coding protein_coding MGP_LPJ_T0081947.1 MGP_LPJ_G0031737.1 mouse_genomes_project 7 23238107 23253091 + Xrcc1 protein_coding retained_intron MGP_LPJ_T0081948.1 MGP_LPJ_G0031737.1 mouse_genomes_project 7 23238110 23243168 + Xrcc1 protein_coding processed_transcript MGP_LPJ_T0081949.1 MGP_LPJ_G0031737.1 mouse_genomes_project 7 23238194 23239451 + Xrcc1 protein_coding retained_intron MGP_LPJ_T0081950.1 MGP_LPJ_G0031737.1 mouse_genomes_project 7 23238242 23259431 + Xrcc1 protein_coding retained_intron MGP_LPJ_T0081951.1 MGP_LPJ_G0031737.1 mouse_genomes_project 7 23258060 23260032 + Xrcc1 protein_coding retained_intron MGP_LPJ_T0081952.1 MGP_LPJ_G0031737.1 mouse_genomes_project 7 23259853 23263331 + Xrcc1 protein_coding retained_intron MGP_LPJ_T0081953.1 MGP_LPJ_G0031737.1 mouse_genomes_project 7 23262193 23263349 + Xrcc1 protein_coding retained_intron MGP_LPJ_T0081954.1 MGP_LPJ_G0031737.1 mouse_genomes_project 7 23262458 23263565 + Xrcc1 protein_coding retained_intron MGP_LPJ_T0081955.1 MGP_LPJ_G0031737.1 mouse_genomes_project 7 23263168 23266079 + Xrcc1 protein_coding processed_transcript MGP_LPJ_T0081956.1 MGP_LPJ_G0031737.1 mouse_genomes_project 7 23264352 23266073 + Xrcc1 protein_coding retained_intron MGP_LPJ_T0081957.1 MGP_LPJ_G0031737.1 mouse_genomes_project 7 23264864 23266073 + Xrcc1 protein_coding processed_transcript MGP_LPJ_T0002305.1 MGP_LPJ_G0002213.1 mouse_genomes_project 7 83093903 83096139 - TEC TEC MGP_LPJ_T0086820.1 MGP_LPJ_G0033004.1 mouse_genomes_project 7 135189604 135331567 + MGP_LPJ_P0086820 Plpp4 protein_coding protein_coding MGP_LPJ_T0086821.1 MGP_LPJ_G0033004.1 mouse_genomes_project 7 135189611 135256621 + Plpp4 protein_coding retained_intron MGP_LPJ_T0086822.1 MGP_LPJ_G0033004.1 mouse_genomes_project 7 135189620 135240700 + Plpp4 protein_coding processed_transcript MGP_LPJ_T0086823.1 MGP_LPJ_G0033004.1 mouse_genomes_project 7 135189622 135331462 + MGP_LPJ_P0086823 Plpp4 protein_coding nonsense_mediated_decay MGP_LPJ_T0086824.1 MGP_LPJ_G0033004.1 mouse_genomes_project 7 135189628 135331174 + MGP_LPJ_P0086824 Plpp4 protein_coding protein_coding MGP_LPJ_T0083892.1 MGP_LPJ_G0032220.1 mouse_genomes_project 7 57708943 57761747 + Cyfip1 protein_coding retained_intron MGP_LPJ_T0083893.1 MGP_LPJ_G0032220.1 mouse_genomes_project 7 57709268 57803293 + MGP_LPJ_P0083893 Cyfip1 protein_coding protein_coding MGP_LPJ_T0083894.1 MGP_LPJ_G0032220.1 mouse_genomes_project 7 57709269 57747334 + MGP_LPJ_P0083894 Cyfip1 protein_coding protein_coding MGP_LPJ_T0083895.1 MGP_LPJ_G0032220.1 mouse_genomes_project 7 57709403 57801190 + MGP_LPJ_P0083895 Cyfip1 protein_coding protein_coding MGP_LPJ_T0083896.1 MGP_LPJ_G0032220.1 mouse_genomes_project 7 57709447 57796488 + Cyfip1 protein_coding retained_intron MGP_LPJ_T0083897.1 MGP_LPJ_G0032220.1 mouse_genomes_project 7 57709452 57801163 + MGP_LPJ_P0083897 Cyfip1 protein_coding protein_coding MGP_LPJ_T0083898.1 MGP_LPJ_G0032220.1 mouse_genomes_project 7 57741254 57794662 + MGP_LPJ_P0083898 Cyfip1 protein_coding protein_coding MGP_LPJ_T0083899.1 MGP_LPJ_G0032220.1 mouse_genomes_project 7 57766942 57771022 + Cyfip1 protein_coding retained_intron MGP_LPJ_T0083900.1 MGP_LPJ_G0032220.1 mouse_genomes_project 7 57767271 57801190 + Cyfip1 protein_coding retained_intron MGP_LPJ_T0083901.1 MGP_LPJ_G0032220.1 mouse_genomes_project 7 57768016 57774996 + Cyfip1 protein_coding retained_intron MGP_LPJ_T0083902.1 MGP_LPJ_G0032220.1 mouse_genomes_project 7 57779101 57784442 + Cyfip1 protein_coding retained_intron MGP_LPJ_T0083903.1 MGP_LPJ_G0032220.1 mouse_genomes_project 7 57799575 57801163 + Cyfip1 protein_coding retained_intron MGP_LPJ_T0098299.1 MGP_LPJ_G0036580.1 mouse_genomes_project 7 14433384 14433504 + n-R5s151 rRNA rRNA MGP_LPJ_T0081633.1 MGP_LPJ_G0031636.1 mouse_genomes_project 7 16072253 16081524 + MGP_LPJ_P0081633 Ceacam13 protein_coding protein_coding MGP_LPJ_T0081634.1 MGP_LPJ_G0031636.1 mouse_genomes_project 7 16072253 16075850 + MGP_LPJ_P0081634 Ceacam13 protein_coding protein_coding MGP_LPJ_T0083163.1 MGP_LPJ_G0032015.1 mouse_genomes_project 7 42030958 42395426 - MGP_LPJ_P0083163 protein_coding protein_coding MGP_LPJ_T0083496.1 MGP_LPJ_G0032116.1 mouse_genomes_project 7 46130897 46135236 - MGP_LPJ_P0083496 Dkkl1 protein_coding protein_coding MGP_LPJ_T0002331.1 MGP_LPJ_G0002239.1 mouse_genomes_project 7 132131109 132132997 + TEC TEC MGP_LPJ_T0002349.1 MGP_LPJ_G0002257.1 mouse_genomes_project 7 151669239 151670583 + TEC TEC MGP_LPJ_T0010889.1 MGP_LPJ_G0009007.1 mouse_genomes_project 7 46038288 46038353 + Mir150 miRNA miRNA MGP_LPJ_T0102465.1 MGP_LPJ_G0040501.1 mouse_genomes_project 7 110602197 110605790 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0081336.1 MGP_LPJ_G0031535.1 mouse_genomes_project 7 9147706 9148618 + MGP_LPJ_P0081336 Vmn1r73 protein_coding protein_coding MGP_LPJ_T0087686.1 MGP_LPJ_G0033207.1 mouse_genomes_project 7 151743801 151748438 + MGP_LPJ_P0087686 Fgf3 protein_coding protein_coding MGP_LPJ_T0087687.1 MGP_LPJ_G0033207.1 mouse_genomes_project 7 151744313 151750155 + MGP_LPJ_P0087687 Fgf3 protein_coding protein_coding MGP_LPJ_T0085562.1 MGP_LPJ_G0032739.1 mouse_genomes_project 7 113515055 113516013 - MGP_LPJ_P0085562 Olfr504 protein_coding protein_coding MGP_LPJ_T0086537.1 MGP_LPJ_G0032950.1 mouse_genomes_project 7 133184775 133190350 - MGP_LPJ_P0086537 protein_coding protein_coding MGP_LPJ_T0102390.1 MGP_LPJ_G0040426.1 mouse_genomes_project 7 48852122 49406195 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0083702.1 MGP_LPJ_G0032164.1 mouse_genomes_project 7 47021027 47081057 - MGP_LPJ_P0083702 Abcc6 protein_coding protein_coding MGP_LPJ_T0083703.1 MGP_LPJ_G0032164.1 mouse_genomes_project 7 47021543 47022334 - Abcc6 protein_coding retained_intron MGP_LPJ_T0083704.1 MGP_LPJ_G0032164.1 mouse_genomes_project 7 47043494 47047891 - Abcc6 protein_coding retained_intron MGP_LPJ_T0087513.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149266258 149283409 + Tnnt3 protein_coding processed_transcript MGP_LPJ_T0087514.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149266258 149283409 + MGP_LPJ_P0087514 Tnnt3 protein_coding protein_coding MGP_LPJ_T0087515.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149266258 149283409 + MGP_LPJ_P0087515 Tnnt3 protein_coding protein_coding MGP_LPJ_T0087516.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149266258 149283409 + MGP_LPJ_P0087516 Tnnt3 protein_coding protein_coding MGP_LPJ_T0087517.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149266258 149283409 + MGP_LPJ_P0087517 Tnnt3 protein_coding protein_coding MGP_LPJ_T0087518.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149266258 149283409 + MGP_LPJ_P0087518 Tnnt3 protein_coding protein_coding MGP_LPJ_T0087519.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149266258 149283409 + MGP_LPJ_P0087519 Tnnt3 protein_coding protein_coding MGP_LPJ_T0087520.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149266258 149283409 + MGP_LPJ_P0087520 Tnnt3 protein_coding protein_coding MGP_LPJ_T0087521.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149266265 149283404 + MGP_LPJ_P0087521 Tnnt3 protein_coding protein_coding MGP_LPJ_T0087522.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149266265 149283404 + MGP_LPJ_P0087522 Tnnt3 protein_coding protein_coding MGP_LPJ_T0087523.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149266265 149283404 + MGP_LPJ_P0087523 Tnnt3 protein_coding protein_coding MGP_LPJ_T0087524.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149266265 149283404 + MGP_LPJ_P0087524 Tnnt3 protein_coding protein_coding MGP_LPJ_T0087525.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149266286 149283408 + MGP_LPJ_P0087525 Tnnt3 protein_coding protein_coding MGP_LPJ_T0087526.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149266294 149283405 + MGP_LPJ_P0087526 Tnnt3 protein_coding protein_coding MGP_LPJ_T0087527.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149269039 149278937 + MGP_LPJ_P0087527 Tnnt3 protein_coding protein_coding MGP_LPJ_T0087528.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149269042 149280023 + MGP_LPJ_P0087528 Tnnt3 protein_coding protein_coding MGP_LPJ_T0087529.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149269060 149283231 + MGP_LPJ_P0087529 Tnnt3 protein_coding protein_coding MGP_LPJ_T0087530.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149269060 149283231 + MGP_LPJ_P0087530 Tnnt3 protein_coding protein_coding MGP_LPJ_T0087531.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149269060 149283231 + MGP_LPJ_P0087531 Tnnt3 protein_coding protein_coding MGP_LPJ_T0087532.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149269060 149283231 + MGP_LPJ_P0087532 Tnnt3 protein_coding protein_coding MGP_LPJ_T0087533.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149269060 149283231 + MGP_LPJ_P0087533 Tnnt3 protein_coding protein_coding MGP_LPJ_T0087534.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149269060 149283231 + MGP_LPJ_P0087534 Tnnt3 protein_coding protein_coding MGP_LPJ_T0087535.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149269060 149283231 + MGP_LPJ_P0087535 Tnnt3 protein_coding protein_coding MGP_LPJ_T0087536.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149269060 149283231 + MGP_LPJ_P0087536 Tnnt3 protein_coding protein_coding MGP_LPJ_T0087537.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149271439 149279986 + Tnnt3 protein_coding retained_intron MGP_LPJ_T0087538.1 MGP_LPJ_G0033176.1 mouse_genomes_project 7 149281530 149283410 + Tnnt3 protein_coding retained_intron MGP_LPJ_T0099725.1 MGP_LPJ_G0037988.1 mouse_genomes_project 7 102567578 102567742 + Gm23040 snRNA snRNA MGP_LPJ_T0010944.1 MGP_LPJ_G0009062.1 mouse_genomes_project 7 133326666 133326757 + miRNA miRNA MGP_LPJ_T0100984.1 MGP_LPJ_G0039247.1 mouse_genomes_project 7 110308994 110309133 - Gm22504 snoRNA snoRNA MGP_LPJ_T0081628.1 MGP_LPJ_G0031631.1 mouse_genomes_project 7 15173875 15187657 + MGP_LPJ_P0081628 Ceacam3 protein_coding protein_coding MGP_LPJ_T0085571.1 MGP_LPJ_G0032748.1 mouse_genomes_project 7 113785539 113786472 - MGP_LPJ_P0085571 Olfr514 protein_coding protein_coding MGP_LPJ_T0081457.1 MGP_LPJ_G0031580.1 mouse_genomes_project 7 11637018 11698178 - MGP_LPJ_P0081457 protein_coding protein_coding MGP_LPJ_T0015807.1 MGP_LPJ_G0013898.1 mouse_genomes_project 7 92069368 92069924 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015881.1 MGP_LPJ_G0013972.1 mouse_genomes_project 7 134912122 134912807 - processed_pseudogene processed_pseudogene MGP_LPJ_T0081893.1 MGP_LPJ_G0031723.1 mouse_genomes_project 7 22872927 22890622 - MGP_LPJ_P0081893 Zfp109 protein_coding protein_coding MGP_LPJ_T0015829.1 MGP_LPJ_G0013920.1 mouse_genomes_project 7 105517115 105518053 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101401.1 MGP_LPJ_G0039582.1 mouse_genomes_project 7 39457606 39457951 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0101402.1 MGP_LPJ_G0039582.1 mouse_genomes_project 7 39457885 39461203 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0084639.1 MGP_LPJ_G0032382.1 mouse_genomes_project 7 89886281 89887241 - MGP_LPJ_P0084639 Olfr305 protein_coding protein_coding MGP_LPJ_T0015803.1 MGP_LPJ_G0013894.1 mouse_genomes_project 7 88722380 88723026 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015843.1 MGP_LPJ_G0013934.1 mouse_genomes_project 7 115452133 115452699 + processed_pseudogene processed_pseudogene MGP_LPJ_T0086512.1 MGP_LPJ_G0032943.1 mouse_genomes_project 7 133013002 133013677 - Sept1 protein_coding retained_intron MGP_LPJ_T0086513.1 MGP_LPJ_G0032943.1 mouse_genomes_project 7 133013309 133016960 - MGP_LPJ_P0086513 Sept1 protein_coding protein_coding MGP_LPJ_T0086514.1 MGP_LPJ_G0032943.1 mouse_genomes_project 7 133013322 133017022 - MGP_LPJ_P0086514 Sept1 protein_coding protein_coding MGP_LPJ_T0086515.1 MGP_LPJ_G0032943.1 mouse_genomes_project 7 133013517 133015590 - Sept1 protein_coding retained_intron MGP_LPJ_T0086516.1 MGP_LPJ_G0032943.1 mouse_genomes_project 7 133014436 133016941 - MGP_LPJ_P0086516 Sept1 protein_coding protein_coding MGP_LPJ_T0086517.1 MGP_LPJ_G0032943.1 mouse_genomes_project 7 133015278 133031260 - MGP_LPJ_P0086517 Sept1 protein_coding protein_coding MGP_LPJ_T0086518.1 MGP_LPJ_G0032943.1 mouse_genomes_project 7 133015315 133016977 - Sept1 protein_coding retained_intron MGP_LPJ_T0086519.1 MGP_LPJ_G0032943.1 mouse_genomes_project 7 133015522 133016782 - Sept1 protein_coding processed_transcript MGP_LPJ_T0086520.1 MGP_LPJ_G0032943.1 mouse_genomes_project 7 133031031 133031744 - Sept1 protein_coding retained_intron MGP_LPJ_T0005225.1 MGP_LPJ_G0004447.1 mouse_genomes_project 7 34808632 34810198 - Gm45091 antisense antisense MGP_LPJ_T0081158.1 MGP_LPJ_G0031459.1 mouse_genomes_project 7 1693330 1719464 - MGP_LPJ_P0081158 Hspbp1 protein_coding protein_coding MGP_LPJ_T0081159.1 MGP_LPJ_G0031459.1 mouse_genomes_project 7 1694943 1697405 - MGP_LPJ_P0081159 Hspbp1 protein_coding protein_coding MGP_LPJ_T0081160.1 MGP_LPJ_G0031459.1 mouse_genomes_project 7 1696975 1697570 - Hspbp1 protein_coding processed_transcript MGP_LPJ_T0081161.1 MGP_LPJ_G0031459.1 mouse_genomes_project 7 1697382 1719390 - MGP_LPJ_P0081161 Hspbp1 protein_coding protein_coding MGP_LPJ_T0081162.1 MGP_LPJ_G0031459.1 mouse_genomes_project 7 1711912 1719057 - MGP_LPJ_P0081162 Hspbp1 protein_coding protein_coding MGP_LPJ_T0081163.1 MGP_LPJ_G0031459.1 mouse_genomes_project 7 1711912 1719377 - MGP_LPJ_P0081163 Hspbp1 protein_coding protein_coding MGP_LPJ_T0083805.1 MGP_LPJ_G0032198.1 mouse_genomes_project 7 50058592 50079232 - MGP_LPJ_P0083805 protein_coding protein_coding MGP_LPJ_T0083806.1 MGP_LPJ_G0032198.1 mouse_genomes_project 7 50060598 50076036 - MGP_LPJ_P0083806 protein_coding protein_coding MGP_LPJ_T0009065.1 MGP_LPJ_G0007295.1 mouse_genomes_project 7 139898883 139900307 - Gm28747 lincRNA lincRNA MGP_LPJ_T0082211.1 MGP_LPJ_G0031805.1 mouse_genomes_project 7 26159101 26174752 + MGP_LPJ_P0082211 protein_coding protein_coding MGP_LPJ_T0082212.1 MGP_LPJ_G0031805.1 mouse_genomes_project 7 26159101 26168910 + MGP_LPJ_P0082212 protein_coding protein_coding MGP_LPJ_T0082213.1 MGP_LPJ_G0031805.1 mouse_genomes_project 7 26160441 26168751 + MGP_LPJ_P0082213 protein_coding protein_coding MGP_LPJ_T0082214.1 MGP_LPJ_G0031805.1 mouse_genomes_project 7 26167221 26168910 + MGP_LPJ_P0082214 protein_coding protein_coding MGP_LPJ_T0015695.1 MGP_LPJ_G0013786.1 mouse_genomes_project 7 24582680 24583296 - processed_pseudogene processed_pseudogene MGP_LPJ_T0081237.1 MGP_LPJ_G0031482.1 mouse_genomes_project 7 2089631 2093385 + MGP_LPJ_P0081237 protein_coding protein_coding MGP_LPJ_T0085779.1 MGP_LPJ_G0032802.1 mouse_genomes_project 7 119899552 119904297 + MGP_LPJ_P0085779 Calcb protein_coding protein_coding MGP_LPJ_T0085780.1 MGP_LPJ_G0032802.1 mouse_genomes_project 7 119899584 119903995 + MGP_LPJ_P0085780 Calcb protein_coding protein_coding MGP_LPJ_T0085781.1 MGP_LPJ_G0032802.1 mouse_genomes_project 7 119900420 119901049 + MGP_LPJ_P0085781 Calcb protein_coding protein_coding MGP_LPJ_T0002224.1 MGP_LPJ_G0002133.1 mouse_genomes_project 7 15875426 15877588 - TEC TEC MGP_LPJ_T0018299.1 MGP_LPJ_G0015583.1 mouse_genomes_project 7 45887730 45892703 + Gm15545 processed_transcript processed_transcript MGP_LPJ_T0018300.1 MGP_LPJ_G0015583.1 mouse_genomes_project 7 45887757 45895412 + Gm15545 processed_transcript processed_transcript MGP_LPJ_T0018301.1 MGP_LPJ_G0015583.1 mouse_genomes_project 7 45887764 45891891 + Gm15545 processed_transcript processed_transcript MGP_LPJ_T0018302.1 MGP_LPJ_G0015583.1 mouse_genomes_project 7 45887803 45893143 + Gm15545 processed_transcript processed_transcript MGP_LPJ_T0102325.1 MGP_LPJ_G0040362.1 mouse_genomes_project 7 12217154 12217632 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0085383.1 MGP_LPJ_G0032655.1 mouse_genomes_project 7 109838743 109839761 - MGP_LPJ_P0085383 Olfr686 protein_coding protein_coding MGP_LPJ_T0005663.1 MGP_LPJ_G0004768.1 mouse_genomes_project 7 121667233 121667984 + AV356131 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_LPJ_T0015825.1 MGP_LPJ_G0013916.1 mouse_genomes_project 7 104420371 104421594 - processed_pseudogene processed_pseudogene MGP_LPJ_T0086683.1 MGP_LPJ_G0032978.1 mouse_genomes_project 7 133740658 133749884 - MGP_LPJ_P0086683 protein_coding nonsense_mediated_decay MGP_LPJ_T0002267.1 MGP_LPJ_G0002176.1 mouse_genomes_project 7 66559871 66560307 - TEC TEC MGP_LPJ_T0005214.1 MGP_LPJ_G0004439.1 mouse_genomes_project 7 30348073 30350041 + Gm17077 antisense antisense MGP_LPJ_T0005318.1 MGP_LPJ_G0004510.1 mouse_genomes_project 7 132815846 132819670 + Gm31749 antisense antisense MGP_LPJ_T0082019.1 MGP_LPJ_G0031755.1 mouse_genomes_project 7 23740817 23810508 - MGP_LPJ_P0082019 Grik5 protein_coding nonsense_mediated_decay MGP_LPJ_T0082020.1 MGP_LPJ_G0031755.1 mouse_genomes_project 7 23740817 23810753 - MGP_LPJ_P0082020 Grik5 protein_coding nonsense_mediated_decay MGP_LPJ_T0082021.1 MGP_LPJ_G0031755.1 mouse_genomes_project 7 23740817 23810699 - MGP_LPJ_P0082021 Grik5 protein_coding protein_coding MGP_LPJ_T0082022.1 MGP_LPJ_G0031755.1 mouse_genomes_project 7 23780755 23795382 - Grik5 protein_coding retained_intron MGP_LPJ_T0082023.1 MGP_LPJ_G0031755.1 mouse_genomes_project 7 23796062 23801653 - Grik5 protein_coding retained_intron MGP_LPJ_T0082024.1 MGP_LPJ_G0031755.1 mouse_genomes_project 7 23796247 23796945 - Grik5 protein_coding retained_intron MGP_LPJ_T0082025.1 MGP_LPJ_G0031755.1 mouse_genomes_project 7 23805023 23810717 - Grik5 protein_coding processed_transcript MGP_LPJ_T0018380.1 MGP_LPJ_G0015616.1 mouse_genomes_project 7 146570318 146592065 + Gm16201 processed_transcript processed_transcript MGP_LPJ_T0018381.1 MGP_LPJ_G0015616.1 mouse_genomes_project 7 146570362 146610671 + Gm16201 processed_transcript processed_transcript MGP_LPJ_T0086259.1 MGP_LPJ_G0032902.1 mouse_genomes_project 7 132292341 132313416 - MGP_LPJ_P0086259 Eif3c protein_coding protein_coding MGP_LPJ_T0086260.1 MGP_LPJ_G0032902.1 mouse_genomes_project 7 132309588 132313363 - MGP_LPJ_P0086260 Eif3c protein_coding protein_coding MGP_LPJ_T0086261.1 MGP_LPJ_G0032902.1 mouse_genomes_project 7 132310003 132313209 - MGP_LPJ_P0086261 Eif3c protein_coding nonsense_mediated_decay MGP_LPJ_T0083406.1 MGP_LPJ_G0032086.1 mouse_genomes_project 7 45706833 45721372 + MGP_LPJ_P0083406 Il4i1 protein_coding protein_coding MGP_LPJ_T0083407.1 MGP_LPJ_G0032086.1 mouse_genomes_project 7 45707117 45731289 + MGP_LPJ_P0083407 Il4i1 protein_coding protein_coding MGP_LPJ_T0083408.1 MGP_LPJ_G0032086.1 mouse_genomes_project 7 45707134 45723504 + Il4i1 protein_coding processed_transcript MGP_LPJ_T0083409.1 MGP_LPJ_G0032086.1 mouse_genomes_project 7 45726772 45731294 + MGP_LPJ_P0083409 Il4i1 protein_coding protein_coding MGP_LPJ_T0083410.1 MGP_LPJ_G0032086.1 mouse_genomes_project 7 45726776 45728782 + Il4i1 protein_coding retained_intron MGP_LPJ_T0083411.1 MGP_LPJ_G0032086.1 mouse_genomes_project 7 45729176 45730266 + Il4i1 protein_coding retained_intron MGP_LPJ_T0083412.1 MGP_LPJ_G0032086.1 mouse_genomes_project 7 45729682 45730253 + MGP_LPJ_P0083412 Il4i1 protein_coding protein_coding MGP_LPJ_T0102413.1 MGP_LPJ_G0040449.1 mouse_genomes_project 7 88514487 88526279 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0098056.1 MGP_LPJ_G0036337.1 mouse_genomes_project 7 113260951 113261897 - pseudogene pseudogene MGP_LPJ_T0084916.1 MGP_LPJ_G0032459.1 mouse_genomes_project 7 103591299 103597130 - MGP_LPJ_P0084916 Rps3 protein_coding protein_coding MGP_LPJ_T0084917.1 MGP_LPJ_G0032459.1 mouse_genomes_project 7 103591307 103597043 - MGP_LPJ_P0084917 Rps3 protein_coding protein_coding MGP_LPJ_T0084918.1 MGP_LPJ_G0032459.1 mouse_genomes_project 7 103592284 103597042 - Rps3 protein_coding retained_intron MGP_LPJ_T0084919.1 MGP_LPJ_G0032459.1 mouse_genomes_project 7 103593101 103597026 - Rps3 protein_coding retained_intron MGP_LPJ_T0087184.1 MGP_LPJ_G0033102.1 mouse_genomes_project 7 147294638 147296933 + MGP_LPJ_P0087184 Olfr539 protein_coding protein_coding MGP_LPJ_T0085938.1 MGP_LPJ_G0032834.1 mouse_genomes_project 7 125143772 125169218 + MGP_LPJ_P0085938 Acsm3 protein_coding protein_coding MGP_LPJ_T0085939.1 MGP_LPJ_G0032834.1 mouse_genomes_project 7 125143772 125169222 + MGP_LPJ_P0085939 Acsm3 protein_coding protein_coding MGP_LPJ_T0085940.1 MGP_LPJ_G0032834.1 mouse_genomes_project 7 125143773 125169220 + MGP_LPJ_P0085940 Acsm3 protein_coding protein_coding MGP_LPJ_T0085941.1 MGP_LPJ_G0032834.1 mouse_genomes_project 7 125143773 125172418 + MGP_LPJ_P0085941 Acsm3 protein_coding protein_coding MGP_LPJ_T0085942.1 MGP_LPJ_G0032834.1 mouse_genomes_project 7 125150392 125169225 + MGP_LPJ_P0085942 Acsm3 protein_coding protein_coding MGP_LPJ_T0085943.1 MGP_LPJ_G0032834.1 mouse_genomes_project 7 125158872 125163502 + Acsm3 protein_coding retained_intron MGP_LPJ_T0085944.1 MGP_LPJ_G0032834.1 mouse_genomes_project 7 125161374 125165342 + Acsm3 protein_coding retained_intron MGP_LPJ_T0085945.1 MGP_LPJ_G0032834.1 mouse_genomes_project 7 125165064 125165383 + Acsm3 protein_coding retained_intron MGP_LPJ_T0085572.1 MGP_LPJ_G0032749.1 mouse_genomes_project 7 113817525 113818580 - MGP_LPJ_P0085572 Olfr517 protein_coding protein_coding MGP_LPJ_T0083150.1 MGP_LPJ_G0032013.1 mouse_genomes_project 7 41871898 41886538 + 2610021A01Rik protein_coding processed_transcript MGP_LPJ_T0083151.1 MGP_LPJ_G0032013.1 mouse_genomes_project 7 41871929 41904844 + MGP_LPJ_P0083151 2610021A01Rik protein_coding protein_coding MGP_LPJ_T0083152.1 MGP_LPJ_G0032013.1 mouse_genomes_project 7 41871953 41878083 + 2610021A01Rik protein_coding processed_transcript MGP_LPJ_T0083153.1 MGP_LPJ_G0032013.1 mouse_genomes_project 7 41871992 41887815 + MGP_LPJ_P0083153 2610021A01Rik protein_coding protein_coding MGP_LPJ_T0083154.1 MGP_LPJ_G0032013.1 mouse_genomes_project 7 41886602 41887838 + 2610021A01Rik protein_coding retained_intron MGP_LPJ_T0083155.1 MGP_LPJ_G0032013.1 mouse_genomes_project 7 41900121 41901073 + 2610021A01Rik protein_coding retained_intron MGP_LPJ_T0102376.1 MGP_LPJ_G0040412.1 mouse_genomes_project 7 44815146 44914139 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0087117.1 MGP_LPJ_G0033071.1 mouse_genomes_project 7 146563713 146565037 + MGP_LPJ_P0087117 Utf1 protein_coding protein_coding MGP_LPJ_T0085538.1 MGP_LPJ_G0032715.1 mouse_genomes_project 7 112752512 112753439 + MGP_LPJ_P0085538 Olfr467 protein_coding protein_coding MGP_LPJ_T0082767.1 MGP_LPJ_G0031938.1 mouse_genomes_project 7 29957529 29968090 - MGP_LPJ_P0082767 Rbm42 protein_coding protein_coding MGP_LPJ_T0082768.1 MGP_LPJ_G0031938.1 mouse_genomes_project 7 29957534 29967917 - MGP_LPJ_P0082768 Rbm42 protein_coding protein_coding MGP_LPJ_T0082769.1 MGP_LPJ_G0031938.1 mouse_genomes_project 7 29961878 29963768 - Rbm42 protein_coding retained_intron MGP_LPJ_T0010901.1 MGP_LPJ_G0009019.1 mouse_genomes_project 7 63931813 63931893 - Mir344d-2 miRNA miRNA MGP_LPJ_T0086901.1 MGP_LPJ_G0033019.1 mouse_genomes_project 7 137491279 137506110 + MGP_LPJ_P0086901 Pstk protein_coding protein_coding MGP_LPJ_T0086902.1 MGP_LPJ_G0033019.1 mouse_genomes_project 7 137491284 137506107 + MGP_LPJ_P0086902 Pstk protein_coding nonsense_mediated_decay MGP_LPJ_T0086903.1 MGP_LPJ_G0033019.1 mouse_genomes_project 7 137491295 137494402 + Pstk protein_coding processed_transcript MGP_LPJ_T0086904.1 MGP_LPJ_G0033019.1 mouse_genomes_project 7 137493173 137506104 + Pstk protein_coding retained_intron MGP_LPJ_T0086905.1 MGP_LPJ_G0033019.1 mouse_genomes_project 7 137502195 137506107 + Pstk protein_coding processed_transcript MGP_LPJ_T0086906.1 MGP_LPJ_G0033019.1 mouse_genomes_project 7 137502527 137505998 + Pstk protein_coding retained_intron MGP_LPJ_T0086907.1 MGP_LPJ_G0033019.1 mouse_genomes_project 7 137502768 137506103 + Pstk protein_coding processed_transcript MGP_LPJ_T0086535.1 MGP_LPJ_G0032949.1 mouse_genomes_project 7 133151552 133154181 - MGP_LPJ_P0086535 Zfp768 protein_coding protein_coding MGP_LPJ_T0086536.1 MGP_LPJ_G0032949.1 mouse_genomes_project 7 133151552 133154347 - MGP_LPJ_P0086536 Zfp768 protein_coding protein_coding MGP_LPJ_T0085509.1 MGP_LPJ_G0032693.1 mouse_genomes_project 7 111857789 111858740 - MGP_LPJ_P0085509 protein_coding protein_coding MGP_LPJ_T0087290.1 MGP_LPJ_G0033134.1 mouse_genomes_project 7 147901470 147941026 + MGP_LPJ_P0087290 Phrf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0087291.1 MGP_LPJ_G0033134.1 mouse_genomes_project 7 147901475 147940910 + MGP_LPJ_P0087291 Phrf1 protein_coding protein_coding MGP_LPJ_T0087292.1 MGP_LPJ_G0033134.1 mouse_genomes_project 7 147908566 147925315 + MGP_LPJ_P0087292 Phrf1 protein_coding protein_coding MGP_LPJ_T0087293.1 MGP_LPJ_G0033134.1 mouse_genomes_project 7 147919358 147940879 + MGP_LPJ_P0087293 Phrf1 protein_coding protein_coding MGP_LPJ_T0087294.1 MGP_LPJ_G0033134.1 mouse_genomes_project 7 147932804 147936353 + Phrf1 protein_coding processed_transcript MGP_LPJ_T0087295.1 MGP_LPJ_G0033134.1 mouse_genomes_project 7 147934286 147936113 + Phrf1 protein_coding retained_intron MGP_LPJ_T0087296.1 MGP_LPJ_G0033134.1 mouse_genomes_project 7 147934287 147935170 + Phrf1 protein_coding retained_intron MGP_LPJ_T0087297.1 MGP_LPJ_G0033134.1 mouse_genomes_project 7 147937473 147941034 + MGP_LPJ_P0087297 Phrf1 protein_coding protein_coding MGP_LPJ_T0087298.1 MGP_LPJ_G0033134.1 mouse_genomes_project 7 147937941 147938871 + Phrf1 protein_coding processed_transcript MGP_LPJ_T0087299.1 MGP_LPJ_G0033134.1 mouse_genomes_project 7 147938680 147941031 + MGP_LPJ_P0087299 Phrf1 protein_coding protein_coding MGP_LPJ_T0087300.1 MGP_LPJ_G0033134.1 mouse_genomes_project 7 147939962 147940984 + Phrf1 protein_coding processed_transcript MGP_LPJ_T0085676.1 MGP_LPJ_G0032779.1 mouse_genomes_project 7 115892542 115950215 - MGP_LPJ_P0085676 Mrvi1 protein_coding protein_coding MGP_LPJ_T0085677.1 MGP_LPJ_G0032779.1 mouse_genomes_project 7 115892548 115968385 - MGP_LPJ_P0085677 Mrvi1 protein_coding protein_coding MGP_LPJ_T0085678.1 MGP_LPJ_G0032779.1 mouse_genomes_project 7 115895635 115968090 - MGP_LPJ_P0085678 Mrvi1 protein_coding protein_coding MGP_LPJ_T0085679.1 MGP_LPJ_G0032779.1 mouse_genomes_project 7 115943607 115947515 - Mrvi1 protein_coding processed_transcript MGP_LPJ_T0085680.1 MGP_LPJ_G0032779.1 mouse_genomes_project 7 115948161 115950484 - Mrvi1 protein_coding retained_intron MGP_LPJ_T0085681.1 MGP_LPJ_G0032779.1 mouse_genomes_project 7 115950196 116004289 - MGP_LPJ_P0085681 Mrvi1 protein_coding protein_coding MGP_LPJ_T0084648.1 MGP_LPJ_G0032390.1 mouse_genomes_project 7 90168307 90169306 - MGP_LPJ_P0084648 Olfr298 protein_coding protein_coding MGP_LPJ_T0008924.1 MGP_LPJ_G0007206.1 mouse_genomes_project 7 75852205 75855399 + Gm44725 lincRNA lincRNA MGP_LPJ_T0081110.1 MGP_LPJ_G0031451.1 mouse_genomes_project 7 1490598 1510427 - MGP_LPJ_P0081110 Ppp1r12c protein_coding protein_coding MGP_LPJ_T0081111.1 MGP_LPJ_G0031451.1 mouse_genomes_project 7 1490598 1510746 - MGP_LPJ_P0081111 Ppp1r12c protein_coding protein_coding MGP_LPJ_T0081112.1 MGP_LPJ_G0031451.1 mouse_genomes_project 7 1490601 1493111 - Ppp1r12c protein_coding retained_intron MGP_LPJ_T0081113.1 MGP_LPJ_G0031451.1 mouse_genomes_project 7 1490666 1491713 - Ppp1r12c protein_coding processed_transcript MGP_LPJ_T0081114.1 MGP_LPJ_G0031451.1 mouse_genomes_project 7 1492712 1493578 - Ppp1r12c protein_coding retained_intron MGP_LPJ_T0081115.1 MGP_LPJ_G0031451.1 mouse_genomes_project 7 1493018 1494393 - Ppp1r12c protein_coding retained_intron MGP_LPJ_T0081116.1 MGP_LPJ_G0031451.1 mouse_genomes_project 7 1493095 1494787 - Ppp1r12c protein_coding retained_intron MGP_LPJ_T0081117.1 MGP_LPJ_G0031451.1 mouse_genomes_project 7 1494284 1495011 - Ppp1r12c protein_coding retained_intron MGP_LPJ_T0081118.1 MGP_LPJ_G0031451.1 mouse_genomes_project 7 1495229 1495813 - Ppp1r12c protein_coding retained_intron MGP_LPJ_T0081119.1 MGP_LPJ_G0031451.1 mouse_genomes_project 7 1498251 1510730 - Ppp1r12c protein_coding retained_intron MGP_LPJ_T0081120.1 MGP_LPJ_G0031451.1 mouse_genomes_project 7 1498890 1510595 - MGP_LPJ_P0081120 Ppp1r12c protein_coding nonsense_mediated_decay MGP_LPJ_T0005217.1 MGP_LPJ_G0004441.1 mouse_genomes_project 7 30551983 30555806 + G630030J09Rik antisense antisense MGP_LPJ_T0008920.1 MGP_LPJ_G0007202.1 mouse_genomes_project 7 74667616 74682363 - Gm36633 lincRNA lincRNA MGP_LPJ_T0082710.1 MGP_LPJ_G0031929.1 mouse_genomes_project 7 29870387 29874576 - MGP_LPJ_P0082710 Lin37 protein_coding protein_coding MGP_LPJ_T0082711.1 MGP_LPJ_G0031929.1 mouse_genomes_project 7 29870390 29870966 - Lin37 protein_coding retained_intron MGP_LPJ_T0082712.1 MGP_LPJ_G0031929.1 mouse_genomes_project 7 29870391 29874768 - MGP_LPJ_P0082712 Lin37 protein_coding protein_coding MGP_LPJ_T0082713.1 MGP_LPJ_G0031929.1 mouse_genomes_project 7 29870804 29874589 - MGP_LPJ_P0082713 Lin37 protein_coding protein_coding MGP_LPJ_T0082714.1 MGP_LPJ_G0031929.1 mouse_genomes_project 7 29872026 29874569 - Lin37 protein_coding processed_transcript MGP_LPJ_T0002262.1 MGP_LPJ_G0002171.1 mouse_genomes_project 7 57863089 57864351 - TEC TEC MGP_LPJ_T0010912.1 MGP_LPJ_G0009030.1 mouse_genomes_project 7 64205835 64205915 - Mir344-2 miRNA miRNA MGP_LPJ_T0018283.1 MGP_LPJ_G0015574.1 mouse_genomes_project 7 26420835 26422069 + Gm44924 processed_transcript processed_transcript MGP_LPJ_T0085277.1 MGP_LPJ_G0032580.1 mouse_genomes_project 7 108145997 108146951 - MGP_LPJ_P0085277 Olfr622 protein_coding protein_coding MGP_LPJ_T0081459.1 MGP_LPJ_G0031582.1 mouse_genomes_project 7 11637026 11698179 - MGP_LPJ_P0081459 Sult2a2 protein_coding protein_coding MGP_LPJ_T0083421.1 MGP_LPJ_G0032088.1 mouse_genomes_project 7 45739474 45745893 + MGP_LPJ_P0083421 Akt1s1 protein_coding protein_coding MGP_LPJ_T0083422.1 MGP_LPJ_G0032088.1 mouse_genomes_project 7 45739707 45745906 + MGP_LPJ_P0083422 Akt1s1 protein_coding protein_coding MGP_LPJ_T0083423.1 MGP_LPJ_G0032088.1 mouse_genomes_project 7 45739827 45745902 + Akt1s1 protein_coding retained_intron MGP_LPJ_T0083424.1 MGP_LPJ_G0032088.1 mouse_genomes_project 7 45740064 45743430 + MGP_LPJ_P0083424 Akt1s1 protein_coding protein_coding MGP_LPJ_T0083425.1 MGP_LPJ_G0032088.1 mouse_genomes_project 7 45740112 45745221 + MGP_LPJ_P0083425 Akt1s1 protein_coding protein_coding MGP_LPJ_T0083426.1 MGP_LPJ_G0032088.1 mouse_genomes_project 7 45740490 45744520 + MGP_LPJ_P0083426 Akt1s1 protein_coding protein_coding MGP_LPJ_T0083427.1 MGP_LPJ_G0032088.1 mouse_genomes_project 7 45740499 45745903 + MGP_LPJ_P0083427 Akt1s1 protein_coding protein_coding MGP_LPJ_T0083428.1 MGP_LPJ_G0032088.1 mouse_genomes_project 7 45740879 45743347 + MGP_LPJ_P0083428 Akt1s1 protein_coding protein_coding MGP_LPJ_T0083429.1 MGP_LPJ_G0032088.1 mouse_genomes_project 7 45741977 45743122 + MGP_LPJ_P0083429 Akt1s1 protein_coding protein_coding MGP_LPJ_T0083430.1 MGP_LPJ_G0032088.1 mouse_genomes_project 7 45743054 45745171 + MGP_LPJ_P0083430 Akt1s1 protein_coding protein_coding MGP_LPJ_T0083431.1 MGP_LPJ_G0032088.1 mouse_genomes_project 7 45743403 45745129 + Akt1s1 protein_coding retained_intron MGP_LPJ_T0085758.1 MGP_LPJ_G0032797.1 mouse_genomes_project 7 119402987 119443079 - MGP_LPJ_P0085758 Copb1 protein_coding protein_coding MGP_LPJ_T0015822.1 MGP_LPJ_G0013913.1 mouse_genomes_project 7 102515830 102516070 + processed_pseudogene processed_pseudogene MGP_LPJ_T0081217.1 MGP_LPJ_G0031473.1 mouse_genomes_project 7 1970374 1977161 + MGP_LPJ_P0081217 Zfp628 protein_coding protein_coding MGP_LPJ_T0005274.1 MGP_LPJ_G0004482.1 mouse_genomes_project 7 93162101 93163463 + Prss23os antisense antisense MGP_LPJ_T0005275.1 MGP_LPJ_G0004482.1 mouse_genomes_project 7 93162117 93162586 + Prss23os antisense antisense MGP_LPJ_T0005292.1 MGP_LPJ_G0004492.1 mouse_genomes_project 7 108814372 108815179 - antisense antisense MGP_LPJ_T0087017.1 MGP_LPJ_G0033043.1 mouse_genomes_project 7 140178773 140534222 - MGP_LPJ_P0087017 Adam12 protein_coding protein_coding MGP_LPJ_T0087018.1 MGP_LPJ_G0033043.1 mouse_genomes_project 7 140181770 140266613 - MGP_LPJ_P0087018 Adam12 protein_coding protein_coding MGP_LPJ_T0087019.1 MGP_LPJ_G0033043.1 mouse_genomes_project 7 140281576 140541115 - MGP_LPJ_P0087019 Adam12 protein_coding protein_coding MGP_LPJ_T0087020.1 MGP_LPJ_G0033043.1 mouse_genomes_project 7 140287493 140541256 - MGP_LPJ_P0087020 Adam12 protein_coding protein_coding MGP_LPJ_T0087021.1 MGP_LPJ_G0033043.1 mouse_genomes_project 7 140480045 140481512 - Adam12 protein_coding retained_intron MGP_LPJ_T0087022.1 MGP_LPJ_G0033043.1 mouse_genomes_project 7 140499005 140534497 - Adam12 protein_coding processed_transcript MGP_LPJ_T0085546.1 MGP_LPJ_G0032723.1 mouse_genomes_project 7 112969429 112970540 + MGP_LPJ_P0085546 Olfr479 protein_coding protein_coding MGP_LPJ_T0084920.1 MGP_LPJ_G0032460.1 mouse_genomes_project 7 103650900 103731285 + MGP_LPJ_P0084920 Arrb1 protein_coding protein_coding MGP_LPJ_T0084921.1 MGP_LPJ_G0032460.1 mouse_genomes_project 7 103650900 103731285 + MGP_LPJ_P0084921 Arrb1 protein_coding protein_coding MGP_LPJ_T0084922.1 MGP_LPJ_G0032460.1 mouse_genomes_project 7 103651096 103728091 + MGP_LPJ_P0084922 Arrb1 protein_coding protein_coding MGP_LPJ_T0084923.1 MGP_LPJ_G0032460.1 mouse_genomes_project 7 103651138 103712017 + MGP_LPJ_P0084923 Arrb1 protein_coding protein_coding MGP_LPJ_T0084924.1 MGP_LPJ_G0032460.1 mouse_genomes_project 7 103655103 103711212 + MGP_LPJ_P0084924 Arrb1 protein_coding protein_coding MGP_LPJ_T0084925.1 MGP_LPJ_G0032460.1 mouse_genomes_project 7 103691683 103711204 + Arrb1 protein_coding processed_transcript MGP_LPJ_T0084926.1 MGP_LPJ_G0032460.1 mouse_genomes_project 7 103717660 103725658 + Arrb1 protein_coding retained_intron MGP_LPJ_T0084927.1 MGP_LPJ_G0032460.1 mouse_genomes_project 7 103717681 103725672 + Arrb1 protein_coding retained_intron MGP_LPJ_T0084928.1 MGP_LPJ_G0032460.1 mouse_genomes_project 7 103717688 103724312 + Arrb1 protein_coding retained_intron MGP_LPJ_T0084929.1 MGP_LPJ_G0032460.1 mouse_genomes_project 7 103717690 103724592 + MGP_LPJ_P0084929 Arrb1 protein_coding protein_coding MGP_LPJ_T0100959.1 MGP_LPJ_G0039222.1 mouse_genomes_project 7 60096408 60096540 - Gm26288 snoRNA snoRNA MGP_LPJ_T0010904.1 MGP_LPJ_G0009022.1 mouse_genomes_project 7 63973241 63973321 - Mir344d-3 miRNA miRNA MGP_LPJ_T0102406.1 MGP_LPJ_G0040442.1 mouse_genomes_project 7 50169883 50170775 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0085399.1 MGP_LPJ_G0032664.1 mouse_genomes_project 7 110052321 110056492 + MGP_LPJ_P0085399 Cnga4 protein_coding protein_coding MGP_LPJ_T0084644.1 MGP_LPJ_G0032387.1 mouse_genomes_project 7 90046441 90047374 + MGP_LPJ_P0084644 Olfr297 protein_coding protein_coding MGP_LPJ_T0085577.1 MGP_LPJ_G0032753.1 mouse_genomes_project 7 113896202 113904737 + MGP_LPJ_P0085577 Eif3f protein_coding protein_coding MGP_LPJ_T0085578.1 MGP_LPJ_G0032753.1 mouse_genomes_project 7 113900180 113902262 + Eif3f protein_coding retained_intron MGP_LPJ_T0085579.1 MGP_LPJ_G0032753.1 mouse_genomes_project 7 113902093 113902794 + Eif3f protein_coding retained_intron MGP_LPJ_T0081602.1 MGP_LPJ_G0031623.1 mouse_genomes_project 7 14908838 14913250 + MGP_LPJ_P0081602 Ptgir protein_coding protein_coding MGP_LPJ_T0081603.1 MGP_LPJ_G0031623.1 mouse_genomes_project 7 14908862 14913245 + MGP_LPJ_P0081603 Ptgir protein_coding protein_coding MGP_LPJ_T0087188.1 MGP_LPJ_G0033106.1 mouse_genomes_project 7 147403519 147414145 - MGP_LPJ_P0087188 Syce1 protein_coding protein_coding MGP_LPJ_T0015705.1 MGP_LPJ_G0013796.1 mouse_genomes_project 7 29125492 29125905 - processed_pseudogene processed_pseudogene MGP_LPJ_T0086314.1 MGP_LPJ_G0032911.1 mouse_genomes_project 7 132454924 132459371 - MGP_LPJ_P0086314 Coro1a protein_coding protein_coding MGP_LPJ_T0086315.1 MGP_LPJ_G0032911.1 mouse_genomes_project 7 132454924 132459967 - MGP_LPJ_P0086315 Coro1a protein_coding protein_coding MGP_LPJ_T0086316.1 MGP_LPJ_G0032911.1 mouse_genomes_project 7 132455032 132458324 - MGP_LPJ_P0086316 Coro1a protein_coding protein_coding MGP_LPJ_T0086317.1 MGP_LPJ_G0032911.1 mouse_genomes_project 7 132455462 132456379 - Coro1a protein_coding retained_intron MGP_LPJ_T0086318.1 MGP_LPJ_G0032911.1 mouse_genomes_project 7 132455506 132456412 - Coro1a protein_coding retained_intron MGP_LPJ_T0086319.1 MGP_LPJ_G0032911.1 mouse_genomes_project 7 132456142 132457247 - Coro1a protein_coding retained_intron MGP_LPJ_T0086320.1 MGP_LPJ_G0032911.1 mouse_genomes_project 7 132456143 132458325 - MGP_LPJ_P0086320 Coro1a protein_coding protein_coding MGP_LPJ_T0086321.1 MGP_LPJ_G0032911.1 mouse_genomes_project 7 132456481 132457624 - Coro1a protein_coding retained_intron MGP_LPJ_T0086322.1 MGP_LPJ_G0032911.1 mouse_genomes_project 7 132456498 132459905 - MGP_LPJ_P0086322 Coro1a protein_coding protein_coding MGP_LPJ_T0086323.1 MGP_LPJ_G0032911.1 mouse_genomes_project 7 132457042 132459698 - MGP_LPJ_P0086323 Coro1a protein_coding protein_coding MGP_LPJ_T0086324.1 MGP_LPJ_G0032911.1 mouse_genomes_project 7 132457053 132462939 - MGP_LPJ_P0086324 Coro1a protein_coding protein_coding MGP_LPJ_T0086325.1 MGP_LPJ_G0032911.1 mouse_genomes_project 7 132457982 132459904 - Coro1a protein_coding retained_intron MGP_LPJ_T0087346.1 MGP_LPJ_G0033144.1 mouse_genomes_project 7 148111122 148114102 - MGP_LPJ_P0087346 Cend1 protein_coding protein_coding MGP_LPJ_T0087347.1 MGP_LPJ_G0033144.1 mouse_genomes_project 7 148111122 148114168 - MGP_LPJ_P0087347 Cend1 protein_coding protein_coding MGP_LPJ_T0087348.1 MGP_LPJ_G0033144.1 mouse_genomes_project 7 148111127 148114095 - MGP_LPJ_P0087348 Cend1 protein_coding protein_coding MGP_LPJ_T0087349.1 MGP_LPJ_G0033144.1 mouse_genomes_project 7 148111127 148114028 - MGP_LPJ_P0087349 Cend1 protein_coding protein_coding MGP_LPJ_T0087165.1 MGP_LPJ_G0033085.1 mouse_genomes_project 7 146808174 146809230 + MGP_LPJ_P0087165 Olfr523 protein_coding protein_coding MGP_LPJ_T0015862.1 MGP_LPJ_G0013953.1 mouse_genomes_project 7 131878272 131878683 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101405.1 MGP_LPJ_G0039584.1 mouse_genomes_project 7 110437477 110545489 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101406.1 MGP_LPJ_G0039584.1 mouse_genomes_project 7 110543798 110545248 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0084684.1 MGP_LPJ_G0032404.1 mouse_genomes_project 7 93159880 93169680 - MGP_LPJ_P0084684 Prss23 protein_coding protein_coding MGP_LPJ_T0005247.1 MGP_LPJ_G0004461.1 mouse_genomes_project 7 59316032 59343480 + Gm9962 antisense antisense MGP_LPJ_T0015775.1 MGP_LPJ_G0013866.1 mouse_genomes_project 7 67595406 67595980 - processed_pseudogene processed_pseudogene MGP_LPJ_T0084459.1 MGP_LPJ_G0032324.1 mouse_genomes_project 7 83942817 84040769 - MGP_LPJ_P0084459 Iqgap1 protein_coding protein_coding MGP_LPJ_T0084460.1 MGP_LPJ_G0032324.1 mouse_genomes_project 7 83960003 83963524 - MGP_LPJ_P0084460 Iqgap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0084461.1 MGP_LPJ_G0032324.1 mouse_genomes_project 7 83975220 83977997 - Iqgap1 protein_coding retained_intron MGP_LPJ_T0084462.1 MGP_LPJ_G0032324.1 mouse_genomes_project 7 83983493 84040616 - Iqgap1 protein_coding retained_intron MGP_LPJ_T0084463.1 MGP_LPJ_G0032324.1 mouse_genomes_project 7 83989252 84040634 - Iqgap1 protein_coding retained_intron MGP_LPJ_T0084464.1 MGP_LPJ_G0032324.1 mouse_genomes_project 7 83996513 84054745 - MGP_LPJ_P0084464 Iqgap1 protein_coding protein_coding MGP_LPJ_T0084465.1 MGP_LPJ_G0032324.1 mouse_genomes_project 7 84002333 84063885 - MGP_LPJ_P0084465 Iqgap1 protein_coding protein_coding MGP_LPJ_T0084466.1 MGP_LPJ_G0032324.1 mouse_genomes_project 7 84033400 84040625 - Iqgap1 protein_coding retained_intron MGP_LPJ_T0102367.1 MGP_LPJ_G0040403.1 mouse_genomes_project 7 42165123 42318285 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008928.1 MGP_LPJ_G0007210.1 mouse_genomes_project 7 75950835 75954106 + Gm44670 lincRNA lincRNA MGP_LPJ_T0008929.1 MGP_LPJ_G0007210.1 mouse_genomes_project 7 75950894 75954541 + Gm44670 lincRNA lincRNA MGP_LPJ_T0015844.1 MGP_LPJ_G0013935.1 mouse_genomes_project 7 115547597 115548190 + processed_pseudogene processed_pseudogene MGP_LPJ_T0008836.1 MGP_LPJ_G0007138.1 mouse_genomes_project 7 29122915 29131357 + Gm26554 lincRNA lincRNA MGP_LPJ_T0010923.1 MGP_LPJ_G0009041.1 mouse_genomes_project 7 81975103 81975200 + Mir7-2 miRNA miRNA MGP_LPJ_T0005342.1 MGP_LPJ_G0004530.1 mouse_genomes_project 7 150143757 150151619 - antisense antisense MGP_LPJ_T0018384.1 MGP_LPJ_G0015618.1 mouse_genomes_project 7 148146866 148150890 - Gm10575 processed_transcript processed_transcript MGP_LPJ_T0018385.1 MGP_LPJ_G0015618.1 mouse_genomes_project 7 148146868 148153170 - Gm10575 processed_transcript processed_transcript MGP_LPJ_T0018386.1 MGP_LPJ_G0015618.1 mouse_genomes_project 7 148147305 148149286 - Gm10575 processed_transcript processed_transcript MGP_LPJ_T0086762.1 MGP_LPJ_G0032996.1 mouse_genomes_project 7 134155309 134156368 + Slc5a2 protein_coding retained_intron MGP_LPJ_T0086763.1 MGP_LPJ_G0032996.1 mouse_genomes_project 7 134155328 134162092 + MGP_LPJ_P0086763 Slc5a2 protein_coding protein_coding MGP_LPJ_T0086764.1 MGP_LPJ_G0032996.1 mouse_genomes_project 7 134155330 134161882 + MGP_LPJ_P0086764 Slc5a2 protein_coding nonsense_mediated_decay MGP_LPJ_T0086765.1 MGP_LPJ_G0032996.1 mouse_genomes_project 7 134155335 134158865 + MGP_LPJ_P0086765 Slc5a2 protein_coding protein_coding MGP_LPJ_T0086766.1 MGP_LPJ_G0032996.1 mouse_genomes_project 7 134155347 134158869 + MGP_LPJ_P0086766 Slc5a2 protein_coding protein_coding MGP_LPJ_T0086767.1 MGP_LPJ_G0032996.1 mouse_genomes_project 7 134155950 134159604 + MGP_LPJ_P0086767 Slc5a2 protein_coding protein_coding MGP_LPJ_T0086768.1 MGP_LPJ_G0032996.1 mouse_genomes_project 7 134155993 134157125 + MGP_LPJ_P0086768 Slc5a2 protein_coding nonsense_mediated_decay MGP_LPJ_T0086769.1 MGP_LPJ_G0032996.1 mouse_genomes_project 7 134156020 134156425 + Slc5a2 protein_coding retained_intron MGP_LPJ_T0086770.1 MGP_LPJ_G0032996.1 mouse_genomes_project 7 134156608 134158718 + Slc5a2 protein_coding retained_intron MGP_LPJ_T0086771.1 MGP_LPJ_G0032996.1 mouse_genomes_project 7 134157037 134159527 + MGP_LPJ_P0086771 Slc5a2 protein_coding nonsense_mediated_decay MGP_LPJ_T0086772.1 MGP_LPJ_G0032996.1 mouse_genomes_project 7 134158678 134161849 + MGP_LPJ_P0086772 Slc5a2 protein_coding protein_coding MGP_LPJ_T0086773.1 MGP_LPJ_G0032996.1 mouse_genomes_project 7 134160118 134161849 + MGP_LPJ_P0086773 Slc5a2 protein_coding nonsense_mediated_decay MGP_LPJ_T0083800.1 MGP_LPJ_G0032195.1 mouse_genomes_project 7 49734008 49735672 - MGP_LPJ_P0083800 Mrgprb5 protein_coding protein_coding MGP_LPJ_T0081852.1 MGP_LPJ_G0031702.1 mouse_genomes_project 7 18214559 18223747 - MGP_LPJ_P0081852 Ceacam16 protein_coding protein_coding MGP_LPJ_T0087316.1 MGP_LPJ_G0033138.1 mouse_genomes_project 7 147971642 147974634 + MGP_LPJ_P0087316 Drd4 protein_coding protein_coding MGP_LPJ_T0018329.1 MGP_LPJ_G0015592.1 mouse_genomes_project 7 72972941 73024263 + processed_transcript antisense MGP_LPJ_T0018330.1 MGP_LPJ_G0015592.1 mouse_genomes_project 7 72998169 73015583 + processed_transcript antisense MGP_LPJ_T0018331.1 MGP_LPJ_G0015592.1 mouse_genomes_project 7 72998169 73024267 + processed_transcript retained_intron MGP_LPJ_T0018332.1 MGP_LPJ_G0015592.1 mouse_genomes_project 7 73000824 73001362 + processed_transcript processed_transcript MGP_LPJ_T0086024.1 MGP_LPJ_G0032858.1 mouse_genomes_project 7 126546464 126629677 + MGP_LPJ_P0086024 Otoa protein_coding protein_coding MGP_LPJ_T0086025.1 MGP_LPJ_G0032858.1 mouse_genomes_project 7 126546550 126565883 + MGP_LPJ_P0086025 Otoa protein_coding protein_coding MGP_LPJ_T0086026.1 MGP_LPJ_G0032858.1 mouse_genomes_project 7 126546566 126554816 + MGP_LPJ_P0086026 Otoa protein_coding protein_coding MGP_LPJ_T0086027.1 MGP_LPJ_G0032858.1 mouse_genomes_project 7 126546566 126554834 + MGP_LPJ_P0086027 Otoa protein_coding protein_coding MGP_LPJ_T0086028.1 MGP_LPJ_G0032858.1 mouse_genomes_project 7 126581560 126625852 + Otoa protein_coding retained_intron MGP_LPJ_T0086029.1 MGP_LPJ_G0032858.1 mouse_genomes_project 7 126581565 126629671 + Otoa protein_coding processed_transcript MGP_LPJ_T0081256.1 MGP_LPJ_G0031493.1 mouse_genomes_project 7 2359310 2430744 - MGP_LPJ_P0081256 Nlrp2 protein_coding protein_coding MGP_LPJ_T0005169.1 MGP_LPJ_G0004407.1 mouse_genomes_project 7 1537990 1539647 + Gm15873 antisense antisense MGP_LPJ_T0005170.1 MGP_LPJ_G0004407.1 mouse_genomes_project 7 1538088 1542029 + Gm15873 antisense antisense MGP_LPJ_T0102402.1 MGP_LPJ_G0040438.1 mouse_genomes_project 7 49695956 49697302 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0085933.1 MGP_LPJ_G0032831.1 mouse_genomes_project 7 124985617 125016336 + MGP_LPJ_P0085933 Acsm1 protein_coding protein_coding MGP_LPJ_T0085934.1 MGP_LPJ_G0032831.1 mouse_genomes_project 7 124996369 125042261 + MGP_LPJ_P0085934 Acsm1 protein_coding protein_coding MGP_LPJ_T0085935.1 MGP_LPJ_G0032831.1 mouse_genomes_project 7 124996401 125041981 + MGP_LPJ_P0085935 Acsm1 protein_coding protein_coding MGP_LPJ_T0082784.1 MGP_LPJ_G0031943.1 mouse_genomes_project 7 30049262 30051096 - MGP_LPJ_P0082784 Tmem147 protein_coding protein_coding MGP_LPJ_T0084624.1 MGP_LPJ_G0032368.1 mouse_genomes_project 7 88399097 88420061 - MGP_LPJ_P0084624 Vmn2r65 protein_coding protein_coding MGP_LPJ_T0081854.1 MGP_LPJ_G0031704.1 mouse_genomes_project 7 18263277 18294878 - MGP_LPJ_P0081854 Pvr protein_coding protein_coding MGP_LPJ_T0081855.1 MGP_LPJ_G0031704.1 mouse_genomes_project 7 18264773 18282971 - Pvr protein_coding retained_intron MGP_LPJ_T0081856.1 MGP_LPJ_G0031704.1 mouse_genomes_project 7 18287998 18294831 - Pvr protein_coding retained_intron MGP_LPJ_T0081857.1 MGP_LPJ_G0031704.1 mouse_genomes_project 7 18290970 18294831 - Pvr protein_coding retained_intron MGP_LPJ_T0002309.1 MGP_LPJ_G0002217.1 mouse_genomes_project 7 83825189 83825748 - TEC TEC MGP_LPJ_T0083378.1 MGP_LPJ_G0032077.1 mouse_genomes_project 7 45434913 45447456 + Napsa protein_coding retained_intron MGP_LPJ_T0083379.1 MGP_LPJ_G0032077.1 mouse_genomes_project 7 45434913 45451118 + MGP_LPJ_P0083379 Napsa protein_coding protein_coding MGP_LPJ_T0083309.1 MGP_LPJ_G0032068.1 mouse_genomes_project 7 45278555 45314351 + MGP_LPJ_P0083309 Lrrc4b protein_coding protein_coding MGP_LPJ_T0083310.1 MGP_LPJ_G0032068.1 mouse_genomes_project 7 45294083 45316341 + MGP_LPJ_P0083310 Lrrc4b protein_coding protein_coding MGP_LPJ_T0083311.1 MGP_LPJ_G0032068.1 mouse_genomes_project 7 45294335 45314397 + MGP_LPJ_P0083311 Lrrc4b protein_coding protein_coding MGP_LPJ_T0085099.1 MGP_LPJ_G0032497.1 mouse_genomes_project 7 106168472 106175290 - MGP_LPJ_P0085099 Folr2 protein_coding protein_coding MGP_LPJ_T0102356.1 MGP_LPJ_G0040392.1 mouse_genomes_project 7 33535996 33544977 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0015760.1 MGP_LPJ_G0013851.1 mouse_genomes_project 7 57507186 57507544 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102375.1 MGP_LPJ_G0040411.1 mouse_genomes_project 7 44804968 44807032 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0102296.1 MGP_LPJ_G0040333.1 mouse_genomes_project 7 7925924 7926298 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0082178.1 MGP_LPJ_G0031795.1 mouse_genomes_project 7 25692810 25708553 + MGP_LPJ_P0082178 protein_coding nonsense_mediated_decay MGP_LPJ_T0102292.1 MGP_LPJ_G0040329.1 mouse_genomes_project 7 7615836 7616732 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0085444.1 MGP_LPJ_G0032672.1 mouse_genomes_project 7 110306716 110310294 + MGP_LPJ_P0085444 protein_coding protein_coding MGP_LPJ_T0085445.1 MGP_LPJ_G0032672.1 mouse_genomes_project 7 110307108 110308504 + MGP_LPJ_P0085445 protein_coding protein_coding MGP_LPJ_T0085446.1 MGP_LPJ_G0032672.1 mouse_genomes_project 7 110307212 110317760 + MGP_LPJ_P0085446 protein_coding protein_coding MGP_LPJ_T0085448.1 MGP_LPJ_G0032672.1 mouse_genomes_project 7 110307224 110308446 + protein_coding retained_intron MGP_LPJ_T0085449.1 MGP_LPJ_G0032672.1 mouse_genomes_project 7 110307224 110318223 + MGP_LPJ_P0085449 protein_coding nonsense_mediated_decay MGP_LPJ_T0085450.1 MGP_LPJ_G0032672.1 mouse_genomes_project 7 110307227 110308500 + MGP_LPJ_P0085450 protein_coding nonsense_mediated_decay MGP_LPJ_T0085451.1 MGP_LPJ_G0032672.1 mouse_genomes_project 7 110307230 110322292 + MGP_LPJ_P0085451 protein_coding protein_coding MGP_LPJ_T0085452.1 MGP_LPJ_G0032672.1 mouse_genomes_project 7 110307231 110310289 + MGP_LPJ_P0085452 protein_coding protein_coding MGP_LPJ_T0085454.1 MGP_LPJ_G0032672.1 mouse_genomes_project 7 110307249 110308410 + protein_coding processed_transcript MGP_LPJ_T0085455.1 MGP_LPJ_G0032672.1 mouse_genomes_project 7 110307250 110308486 + MGP_LPJ_P0085455 protein_coding protein_coding MGP_LPJ_T0085456.1 MGP_LPJ_G0032672.1 mouse_genomes_project 7 110307331 110307945 + protein_coding retained_intron MGP_LPJ_T0085907.1 MGP_LPJ_G0032822.1 mouse_genomes_project 7 124176861 124192197 - MGP_LPJ_P0085907 Knop1 protein_coding protein_coding MGP_LPJ_T0085908.1 MGP_LPJ_G0032822.1 mouse_genomes_project 7 124176861 124192197 - MGP_LPJ_P0085908 Knop1 protein_coding protein_coding MGP_LPJ_T0085909.1 MGP_LPJ_G0032822.1 mouse_genomes_project 7 124176876 124192200 - MGP_LPJ_P0085909 Knop1 protein_coding protein_coding MGP_LPJ_T0085910.1 MGP_LPJ_G0032822.1 mouse_genomes_project 7 124178422 124191883 - MGP_LPJ_P0085910 Knop1 protein_coding protein_coding MGP_LPJ_T0085911.1 MGP_LPJ_G0032822.1 mouse_genomes_project 7 124180121 124191801 - MGP_LPJ_P0085911 Knop1 protein_coding protein_coding MGP_LPJ_T0085912.1 MGP_LPJ_G0032822.1 mouse_genomes_project 7 124180380 124192453 - MGP_LPJ_P0085912 Knop1 protein_coding protein_coding MGP_LPJ_T0085913.1 MGP_LPJ_G0032822.1 mouse_genomes_project 7 124187304 124188827 - MGP_LPJ_P0085913 Knop1 protein_coding protein_coding MGP_LPJ_T0009017.1 MGP_LPJ_G0007263.1 mouse_genomes_project 7 122522939 122573090 + Gm45152 lincRNA lincRNA MGP_LPJ_T0081499.1 MGP_LPJ_G0031600.1 mouse_genomes_project 7 14047542 14049172 + Kptn protein_coding retained_intron MGP_LPJ_T0081500.1 MGP_LPJ_G0031600.1 mouse_genomes_project 7 14047542 14055105 + MGP_LPJ_P0081500 Kptn protein_coding protein_coding MGP_LPJ_T0081501.1 MGP_LPJ_G0031600.1 mouse_genomes_project 7 14047576 14048620 + Kptn protein_coding retained_intron MGP_LPJ_T0081502.1 MGP_LPJ_G0031600.1 mouse_genomes_project 7 14047866 14051452 + Kptn protein_coding retained_intron MGP_LPJ_T0081503.1 MGP_LPJ_G0031600.1 mouse_genomes_project 7 14048098 14048611 + Kptn protein_coding retained_intron MGP_LPJ_T0081504.1 MGP_LPJ_G0031600.1 mouse_genomes_project 7 14050402 14051415 + Kptn protein_coding retained_intron MGP_LPJ_T0081505.1 MGP_LPJ_G0031600.1 mouse_genomes_project 7 14050469 14051594 + Kptn protein_coding retained_intron MGP_LPJ_T0081506.1 MGP_LPJ_G0031600.1 mouse_genomes_project 7 14053000 14054953 + Kptn protein_coding retained_intron MGP_LPJ_T0015811.1 MGP_LPJ_G0013902.1 mouse_genomes_project 7 98327928 98328060 + processed_pseudogene processed_pseudogene MGP_LPJ_T0084148.1 MGP_LPJ_G0032271.1 mouse_genomes_project 7 72958884 72968480 - MGP_LPJ_P0084148 Nr2f2 protein_coding protein_coding MGP_LPJ_T0084149.1 MGP_LPJ_G0032271.1 mouse_genomes_project 7 72962333 72974520 - MGP_LPJ_P0084149 Nr2f2 protein_coding protein_coding MGP_LPJ_T0018365.1 MGP_LPJ_G0015607.1 mouse_genomes_project 7 132536707 132545504 - Gm9967 processed_transcript antisense MGP_LPJ_T0018366.1 MGP_LPJ_G0015607.1 mouse_genomes_project 7 132542429 132545492 - Gm9967 processed_transcript antisense MGP_LPJ_T0018367.1 MGP_LPJ_G0015607.1 mouse_genomes_project 7 132543690 132545544 - Gm9967 processed_transcript retained_intron MGP_LPJ_T0008833.1 MGP_LPJ_G0007135.1 mouse_genomes_project 7 24608983 24613501 + Gm26707 lincRNA lincRNA MGP_LPJ_T0015804.1 MGP_LPJ_G0013895.1 mouse_genomes_project 7 89263016 89263593 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099705.1 MGP_LPJ_G0037968.1 mouse_genomes_project 7 40922651 40922732 + Gm25784 snRNA snRNA MGP_LPJ_T0086524.1 MGP_LPJ_G0032945.1 mouse_genomes_project 7 133043759 133055023 + MGP_LPJ_P0086524 Zfp771 protein_coding protein_coding MGP_LPJ_T0086525.1 MGP_LPJ_G0032945.1 mouse_genomes_project 7 133045570 133046181 + Zfp771 protein_coding processed_transcript MGP_LPJ_T0086526.1 MGP_LPJ_G0032945.1 mouse_genomes_project 7 133045656 133054092 + MGP_LPJ_P0086526 Zfp771 protein_coding protein_coding MGP_LPJ_T0082815.1 MGP_LPJ_G0031949.1 mouse_genomes_project 7 30202699 30204548 - MGP_LPJ_P0082815 Ffar3 protein_coding protein_coding MGP_LPJ_T0082816.1 MGP_LPJ_G0031949.1 mouse_genomes_project 7 30203303 30204537 - MGP_LPJ_P0082816 Ffar3 protein_coding protein_coding MGP_LPJ_T0102366.1 MGP_LPJ_G0040402.1 mouse_genomes_project 7 42008032 42008272 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0008975.1 MGP_LPJ_G0007236.1 mouse_genomes_project 7 87974007 88020439 + lincRNA lincRNA MGP_LPJ_T0084336.1 MGP_LPJ_G0032305.1 mouse_genomes_project 7 83041555 83091981 - MGP_LPJ_P0084336 Ap3s2 protein_coding protein_coding MGP_LPJ_T0084337.1 MGP_LPJ_G0032305.1 mouse_genomes_project 7 83050672 83091928 - MGP_LPJ_P0084337 Ap3s2 protein_coding nonsense_mediated_decay MGP_LPJ_T0081258.1 MGP_LPJ_G0031495.1 mouse_genomes_project 7 2486165 2487638 - MGP_LPJ_P0081258 Vmn1r56 protein_coding protein_coding MGP_LPJ_T0087245.1 MGP_LPJ_G0033123.1 mouse_genomes_project 7 147682311 147682618 + MGP_LPJ_P0087245 Gm17387 protein_coding protein_coding MGP_LPJ_T0083353.1 MGP_LPJ_G0032074.1 mouse_genomes_project 7 45387044 45393122 - MGP_LPJ_P0083353 Spib protein_coding protein_coding MGP_LPJ_T0083354.1 MGP_LPJ_G0032074.1 mouse_genomes_project 7 45389014 45392327 - MGP_LPJ_P0083354 Spib protein_coding protein_coding MGP_LPJ_T0083355.1 MGP_LPJ_G0032074.1 mouse_genomes_project 7 45389014 45393104 - MGP_LPJ_P0083355 Spib protein_coding protein_coding MGP_LPJ_T0083211.1 MGP_LPJ_G0032032.1 mouse_genomes_project 7 44245551 44259462 - MGP_LPJ_P0083211 4931406B18Rik protein_coding protein_coding MGP_LPJ_T0083212.1 MGP_LPJ_G0032032.1 mouse_genomes_project 7 44247367 44259158 - MGP_LPJ_P0083212 4931406B18Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0083213.1 MGP_LPJ_G0032032.1 mouse_genomes_project 7 44248117 44259452 - MGP_LPJ_P0083213 4931406B18Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0083214.1 MGP_LPJ_G0032032.1 mouse_genomes_project 7 44250239 44257760 - MGP_LPJ_P0083214 4931406B18Rik protein_coding protein_coding MGP_LPJ_T0083215.1 MGP_LPJ_G0032032.1 mouse_genomes_project 7 44251318 44259458 - 4931406B18Rik protein_coding retained_intron MGP_LPJ_T0083216.1 MGP_LPJ_G0032032.1 mouse_genomes_project 7 44251964 44259464 - MGP_LPJ_P0083216 4931406B18Rik protein_coding protein_coding MGP_LPJ_T0083217.1 MGP_LPJ_G0032032.1 mouse_genomes_project 7 44254792 44259219 - MGP_LPJ_P0083217 4931406B18Rik protein_coding protein_coding MGP_LPJ_T0015784.1 MGP_LPJ_G0013875.1 mouse_genomes_project 7 75755666 75762254 - processed_pseudogene processed_pseudogene MGP_LPJ_T0081556.1 MGP_LPJ_G0031616.1 mouse_genomes_project 7 14723006 14733833 + MGP_LPJ_P0081556 Ap2s1 protein_coding protein_coding MGP_LPJ_T0081557.1 MGP_LPJ_G0031616.1 mouse_genomes_project 7 14723040 14733553 + MGP_LPJ_P0081557 Ap2s1 protein_coding protein_coding MGP_LPJ_T0081558.1 MGP_LPJ_G0031616.1 mouse_genomes_project 7 14723068 14733473 + MGP_LPJ_P0081558 Ap2s1 protein_coding nonsense_mediated_decay MGP_LPJ_T0081559.1 MGP_LPJ_G0031616.1 mouse_genomes_project 7 14723134 14733287 + Ap2s1 protein_coding processed_transcript MGP_LPJ_T0081560.1 MGP_LPJ_G0031616.1 mouse_genomes_project 7 14731301 14733833 + Ap2s1 protein_coding retained_intron MGP_LPJ_T0085386.1 MGP_LPJ_G0032658.1 mouse_genomes_project 7 109964287 109965310 + MGP_LPJ_P0085386 protein_coding protein_coding MGP_LPJ_T0082785.1 MGP_LPJ_G0031944.1 mouse_genomes_project 7 30051332 30066823 - MGP_LPJ_P0082785 Gapdhs protein_coding protein_coding MGP_LPJ_T0082786.1 MGP_LPJ_G0031944.1 mouse_genomes_project 7 30051336 30054475 - MGP_LPJ_P0082786 Gapdhs protein_coding nonsense_mediated_decay MGP_LPJ_T0082787.1 MGP_LPJ_G0031944.1 mouse_genomes_project 7 30051341 30071643 - MGP_LPJ_P0082787 Gapdhs protein_coding protein_coding MGP_LPJ_T0082343.1 MGP_LPJ_G0031838.1 mouse_genomes_project 7 27369817 27371209 + MGP_LPJ_P0082343 Eid2 protein_coding protein_coding MGP_LPJ_T0083811.1 MGP_LPJ_G0032202.1 mouse_genomes_project 7 50398381 50417438 - MGP_LPJ_P0083811 Csrp3 protein_coding protein_coding MGP_LPJ_T0083812.1 MGP_LPJ_G0032202.1 mouse_genomes_project 7 50398381 50413055 - MGP_LPJ_P0083812 Csrp3 protein_coding protein_coding MGP_LPJ_T0010916.1 MGP_LPJ_G0009034.1 mouse_genomes_project 7 64357750 64357838 - Mir344i miRNA miRNA MGP_LPJ_T0083961.1 MGP_LPJ_G0032233.1 mouse_genomes_project 7 64624429 64626081 + MGP_LPJ_P0083961 Ndn protein_coding protein_coding MGP_LPJ_T0005208.1 MGP_LPJ_G0004434.1 mouse_genomes_project 7 29828081 29835153 + Arhgap33os antisense antisense MGP_LPJ_T0102432.1 MGP_LPJ_G0040468.1 mouse_genomes_project 7 89679266 89680137 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002344.1 MGP_LPJ_G0002252.1 mouse_genomes_project 7 149924259 149924494 + TEC TEC MGP_LPJ_T0085993.1 MGP_LPJ_G0032848.1 mouse_genomes_project 7 126084499 126095543 - MGP_LPJ_P0085993 Pdzd9 protein_coding protein_coding MGP_LPJ_T0085994.1 MGP_LPJ_G0032848.1 mouse_genomes_project 7 126084557 126095450 - Pdzd9 protein_coding processed_transcript MGP_LPJ_T0083224.1 MGP_LPJ_G0032034.1 mouse_genomes_project 7 44315001 44333143 + MGP_LPJ_P0083224 Zfp658 protein_coding protein_coding MGP_LPJ_T0083225.1 MGP_LPJ_G0032034.1 mouse_genomes_project 7 44317529 44332648 + MGP_LPJ_P0083225 Zfp658 protein_coding protein_coding MGP_LPJ_T0085207.1 MGP_LPJ_G0032516.1 mouse_genomes_project 7 106804066 106833103 + MGP_LPJ_P0085207 Rrm1 protein_coding protein_coding MGP_LPJ_T0087080.1 MGP_LPJ_G0033064.1 mouse_genomes_project 7 145754859 145760165 + MGP_LPJ_P0087080 Lrrc27 protein_coding protein_coding MGP_LPJ_T0087081.1 MGP_LPJ_G0033064.1 mouse_genomes_project 7 145755066 145798459 + MGP_LPJ_P0087081 Lrrc27 protein_coding unknown_likely_coding MGP_LPJ_T0087082.1 MGP_LPJ_G0033064.1 mouse_genomes_project 7 145755120 145784860 + MGP_LPJ_P0087082 Lrrc27 protein_coding protein_coding MGP_LPJ_T0087083.1 MGP_LPJ_G0033064.1 mouse_genomes_project 7 145756580 145763122 + MGP_LPJ_P0087083 Lrrc27 protein_coding protein_coding MGP_LPJ_T0087084.1 MGP_LPJ_G0033064.1 mouse_genomes_project 7 145762473 145781999 + Lrrc27 protein_coding processed_transcript MGP_LPJ_T0087085.1 MGP_LPJ_G0033064.1 mouse_genomes_project 7 145762630 145782092 + Lrrc27 protein_coding retained_intron MGP_LPJ_T0087086.1 MGP_LPJ_G0033064.1 mouse_genomes_project 7 145789758 145798653 + Lrrc27 protein_coding processed_transcript MGP_LPJ_T0087087.1 MGP_LPJ_G0033064.1 mouse_genomes_project 7 145791718 145798654 + Lrrc27 protein_coding processed_transcript MGP_LPJ_T0087088.1 MGP_LPJ_G0033064.1 mouse_genomes_project 7 145794273 145798658 + Lrrc27 protein_coding processed_transcript MGP_LPJ_T0084655.1 MGP_LPJ_G0032395.1 mouse_genomes_project 7 90476467 90526209 + MGP_LPJ_P0084655 protein_coding protein_coding MGP_LPJ_T0102322.1 MGP_LPJ_G0040359.1 mouse_genomes_project 7 12136123 12136565 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0015688.1 MGP_LPJ_G0013779.1 mouse_genomes_project 7 22982300 22985274 - processed_pseudogene processed_pseudogene MGP_LPJ_T0085919.1 MGP_LPJ_G0032824.1 mouse_genomes_project 7 124322611 124345790 - MGP_LPJ_P0085919 Gprc5b protein_coding protein_coding MGP_LPJ_T0086042.1 MGP_LPJ_G0032864.1 mouse_genomes_project 7 127495999 127531217 - MGP_LPJ_P0086042 Gga2 protein_coding protein_coding MGP_LPJ_T0086043.1 MGP_LPJ_G0032864.1 mouse_genomes_project 7 127495999 127531162 - MGP_LPJ_P0086043 Gga2 protein_coding nonsense_mediated_decay MGP_LPJ_T0086044.1 MGP_LPJ_G0032864.1 mouse_genomes_project 7 127498025 127511448 - Gga2 protein_coding retained_intron MGP_LPJ_T0086045.1 MGP_LPJ_G0032864.1 mouse_genomes_project 7 127505842 127508281 - Gga2 protein_coding retained_intron MGP_LPJ_T0086046.1 MGP_LPJ_G0032864.1 mouse_genomes_project 7 127513722 127531175 - Gga2 protein_coding retained_intron MGP_LPJ_T0086047.1 MGP_LPJ_G0032864.1 mouse_genomes_project 7 127519400 127531182 - Gga2 protein_coding retained_intron MGP_LPJ_T0100951.1 MGP_LPJ_G0039214.1 mouse_genomes_project 7 45078505 45078598 + Gm23991 snoRNA snoRNA MGP_LPJ_T0102299.1 MGP_LPJ_G0040336.1 mouse_genomes_project 7 9035534 9036456 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0015823.1 MGP_LPJ_G0013914.1 mouse_genomes_project 7 102525769 102526086 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015831.1 MGP_LPJ_G0013922.1 mouse_genomes_project 7 107568952 107569615 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015747.1 MGP_LPJ_G0013838.1 mouse_genomes_project 7 44136440 44137170 + processed_pseudogene processed_pseudogene MGP_LPJ_T0081853.1 MGP_LPJ_G0031703.1 mouse_genomes_project 7 18239812 18252053 - MGP_LPJ_P0081853 Ceacam19 protein_coding protein_coding MGP_LPJ_T0085301.1 MGP_LPJ_G0032602.1 mouse_genomes_project 7 108550231 108682746 - MGP_LPJ_P0085301 protein_coding protein_coding MGP_LPJ_T0083059.1 MGP_LPJ_G0031992.1 mouse_genomes_project 7 35273723 35283005 - MGP_LPJ_P0083059 Nudt19 protein_coding protein_coding MGP_LPJ_T0083060.1 MGP_LPJ_G0031992.1 mouse_genomes_project 7 35274234 35281904 - Nudt19 protein_coding processed_transcript MGP_LPJ_T0083061.1 MGP_LPJ_G0031992.1 mouse_genomes_project 7 35274689 35278755 - Nudt19 protein_coding retained_intron MGP_LPJ_T0102311.1 MGP_LPJ_G0040348.1 mouse_genomes_project 7 9833560 9834251 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0086920.1 MGP_LPJ_G0033022.1 mouse_genomes_project 7 137669078 137671137 + MGP_LPJ_P0086920 Hmx3 protein_coding protein_coding MGP_LPJ_T0099717.1 MGP_LPJ_G0037980.1 mouse_genomes_project 7 84981286 84981394 + Gm26149 snRNA snRNA MGP_LPJ_T0084859.1 MGP_LPJ_G0032445.1 mouse_genomes_project 7 102267550 102357245 - MGP_LPJ_P0084859 Acer3 protein_coding nonsense_mediated_decay MGP_LPJ_T0084860.1 MGP_LPJ_G0032445.1 mouse_genomes_project 7 102267944 102357167 - MGP_LPJ_P0084860 Acer3 protein_coding protein_coding MGP_LPJ_T0084861.1 MGP_LPJ_G0032445.1 mouse_genomes_project 7 102275360 102279303 - Acer3 protein_coding retained_intron MGP_LPJ_T0084862.1 MGP_LPJ_G0032445.1 mouse_genomes_project 7 102301319 102357223 - MGP_LPJ_P0084862 Acer3 protein_coding nonsense_mediated_decay MGP_LPJ_T0008826.1 MGP_LPJ_G0007130.1 mouse_genomes_project 7 23360028 23361844 + Gm4598 lincRNA lincRNA MGP_LPJ_T0008945.1 MGP_LPJ_G0007223.1 mouse_genomes_project 7 78687537 78690546 - AU020206 lincRNA lincRNA MGP_LPJ_T0008946.1 MGP_LPJ_G0007223.1 mouse_genomes_project 7 78688261 78701150 - AU020206 lincRNA lincRNA MGP_LPJ_T0002306.1 MGP_LPJ_G0002214.1 mouse_genomes_project 7 83220432 83222352 + TEC TEC MGP_LPJ_T0010954.1 MGP_LPJ_G0009072.1 mouse_genomes_project 7 147893864 147893974 - Mir210 miRNA miRNA MGP_LPJ_T0086896.1 MGP_LPJ_G0033015.1 mouse_genomes_project 7 137423608 137439605 - MGP_LPJ_P0086896 Cuzd1 protein_coding protein_coding MGP_LPJ_T0087189.1 MGP_LPJ_G0033107.1 mouse_genomes_project 7 147439679 147455457 - MGP_LPJ_P0087189 Zfp941 protein_coding protein_coding MGP_LPJ_T0087190.1 MGP_LPJ_G0033107.1 mouse_genomes_project 7 147441919 147455411 - MGP_LPJ_P0087190 Zfp941 protein_coding protein_coding MGP_LPJ_T0087191.1 MGP_LPJ_G0033107.1 mouse_genomes_project 7 147451742 147455425 - Zfp941 protein_coding processed_transcript MGP_LPJ_T0085376.1 MGP_LPJ_G0032648.1 mouse_genomes_project 7 109615487 109616441 + MGP_LPJ_P0085376 Olfr676 protein_coding protein_coding MGP_LPJ_T0015791.1 MGP_LPJ_G0013882.1 mouse_genomes_project 7 78332446 78332725 - processed_pseudogene processed_pseudogene MGP_LPJ_T0081862.1 MGP_LPJ_G0031708.1 mouse_genomes_project 7 21839882 21848341 + protein_coding processed_transcript MGP_LPJ_T0008998.1 MGP_LPJ_G0007254.1 mouse_genomes_project 7 114991367 114999635 - lincRNA lincRNA MGP_LPJ_T0008999.1 MGP_LPJ_G0007254.1 mouse_genomes_project 7 114991395 114992225 - lincRNA lincRNA MGP_LPJ_T0009000.1 MGP_LPJ_G0007254.1 mouse_genomes_project 7 114991403 115154580 - lincRNA lincRNA MGP_LPJ_T0009001.1 MGP_LPJ_G0007254.1 mouse_genomes_project 7 114994131 114999620 - lincRNA lincRNA MGP_LPJ_T0005327.1 MGP_LPJ_G0004518.1 mouse_genomes_project 7 134638295 134639424 + Gm44674 antisense antisense MGP_LPJ_T0082761.1 MGP_LPJ_G0031934.1 mouse_genomes_project 7 29904507 29907768 - MGP_LPJ_P0082761 Zbtb32 protein_coding protein_coding MGP_LPJ_T0082762.1 MGP_LPJ_G0031934.1 mouse_genomes_project 7 29904509 29913687 - MGP_LPJ_P0082762 Zbtb32 protein_coding protein_coding MGP_LPJ_T0082763.1 MGP_LPJ_G0031934.1 mouse_genomes_project 7 29912755 29913727 - Zbtb32 protein_coding processed_transcript MGP_LPJ_T0081672.1 MGP_LPJ_G0031656.1 mouse_genomes_project 7 17297480 17312298 - MGP_LPJ_P0081672 Foxa3 protein_coding protein_coding MGP_LPJ_T0086893.1 MGP_LPJ_G0033013.1 mouse_genomes_project 7 137238760 137248370 - MGP_LPJ_P0086893 4933402N03Rik protein_coding protein_coding MGP_LPJ_T0086037.1 MGP_LPJ_G0032863.1 mouse_genomes_project 7 127380078 127383191 - Cog7 protein_coding retained_intron MGP_LPJ_T0086038.1 MGP_LPJ_G0032863.1 mouse_genomes_project 7 127380700 127491002 - MGP_LPJ_P0086038 Cog7 protein_coding protein_coding MGP_LPJ_T0086040.1 MGP_LPJ_G0032863.1 mouse_genomes_project 7 127427241 127491002 - MGP_LPJ_P0086040 Cog7 protein_coding protein_coding MGP_LPJ_T0086041.1 MGP_LPJ_G0032863.1 mouse_genomes_project 7 127435043 127490985 - Cog7 protein_coding retained_intron MGP_LPJ_T0084787.1 MGP_LPJ_G0032431.1 mouse_genomes_project 7 101419727 101427500 + MGP_LPJ_P0084787 Ndufc2 protein_coding protein_coding MGP_LPJ_T0084788.1 MGP_LPJ_G0032431.1 mouse_genomes_project 7 101419827 101426778 + MGP_LPJ_P0084788 Ndufc2 protein_coding protein_coding MGP_LPJ_T0002321.1 MGP_LPJ_G0002229.1 mouse_genomes_project 7 127836687 127842126 + TEC TEC MGP_LPJ_T0081425.1 MGP_LPJ_G0031571.1 mouse_genomes_project 7 10735728 10736679 + MGP_LPJ_P0081425 Vmn1r89 protein_coding protein_coding MGP_LPJ_T0082844.1 MGP_LPJ_G0031955.1 mouse_genomes_project 7 30308075 30349640 - MGP_LPJ_P0082844 Usf2 protein_coding protein_coding MGP_LPJ_T0082845.1 MGP_LPJ_G0031955.1 mouse_genomes_project 7 30309029 30348488 - MGP_LPJ_P0082845 Usf2 protein_coding protein_coding MGP_LPJ_T0082846.1 MGP_LPJ_G0031955.1 mouse_genomes_project 7 30309035 30349001 - Usf2 protein_coding processed_transcript MGP_LPJ_T0082847.1 MGP_LPJ_G0031955.1 mouse_genomes_project 7 30309035 30349001 - MGP_LPJ_P0082847 Usf2 protein_coding protein_coding MGP_LPJ_T0082848.1 MGP_LPJ_G0031955.1 mouse_genomes_project 7 30309035 30349001 - MGP_LPJ_P0082848 Usf2 protein_coding protein_coding MGP_LPJ_T0082849.1 MGP_LPJ_G0031955.1 mouse_genomes_project 7 30309035 30349001 - MGP_LPJ_P0082849 Usf2 protein_coding protein_coding MGP_LPJ_T0082850.1 MGP_LPJ_G0031955.1 mouse_genomes_project 7 30309035 30349001 - MGP_LPJ_P0082850 Usf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0082851.1 MGP_LPJ_G0031955.1 mouse_genomes_project 7 30309206 30347699 - Usf2 protein_coding retained_intron MGP_LPJ_T0082852.1 MGP_LPJ_G0031955.1 mouse_genomes_project 7 30309296 30348155 - MGP_LPJ_P0082852 Usf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0082853.1 MGP_LPJ_G0031955.1 mouse_genomes_project 7 30348175 30348899 - Usf2 protein_coding processed_transcript MGP_LPJ_T0015855.1 MGP_LPJ_G0013946.1 mouse_genomes_project 7 127771116 127771840 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015882.1 MGP_LPJ_G0013973.1 mouse_genomes_project 7 134971457 134972223 - processed_pseudogene processed_pseudogene MGP_LPJ_T0083748.1 MGP_LPJ_G0032178.1 mouse_genomes_project 7 47849477 47852212 + MGP_LPJ_P0083748 Saa2 protein_coding protein_coding MGP_LPJ_T0084650.1 MGP_LPJ_G0032392.1 mouse_genomes_project 7 90241654 90249086 + MGP_LPJ_P0084650 Olfr292 protein_coding protein_coding MGP_LPJ_T0002296.1 MGP_LPJ_G0002204.1 mouse_genomes_project 7 82009637 82011270 - TEC TEC MGP_LPJ_T0085169.1 MGP_LPJ_G0032508.1 mouse_genomes_project 7 106425003 106439729 + MGP_LPJ_P0085169 Trpc2 protein_coding protein_coding MGP_LPJ_T0098298.1 MGP_LPJ_G0036579.1 mouse_genomes_project 7 3722681 3722789 + n-R5s150 rRNA rRNA MGP_LPJ_T0008980.1 MGP_LPJ_G0007241.1 mouse_genomes_project 7 96824309 96934197 + Gm26862 lincRNA lincRNA MGP_LPJ_T0085755.1 MGP_LPJ_G0032795.1 mouse_genomes_project 7 118927365 119219899 + MGP_LPJ_P0085755 Spon1 protein_coding protein_coding MGP_LPJ_T0085756.1 MGP_LPJ_G0032795.1 mouse_genomes_project 7 118927541 119102035 + MGP_LPJ_P0085756 Spon1 protein_coding protein_coding MGP_LPJ_T0082680.1 MGP_LPJ_G0031922.1 mouse_genomes_project 7 29741394 29753222 - MGP_LPJ_P0082680 Aplp1 protein_coding protein_coding MGP_LPJ_T0083958.1 MGP_LPJ_G0032231.1 mouse_genomes_project 7 61924975 61950815 - MGP_LPJ_P0083958 Snrpn protein_coding protein_coding MGP_LPJ_T0083959.1 MGP_LPJ_G0032231.1 mouse_genomes_project 7 61924982 62094987 - MGP_LPJ_P0083959 Snrpn protein_coding protein_coding MGP_LPJ_T0015866.1 MGP_LPJ_G0013957.1 mouse_genomes_project 7 132510824 132511186 + processed_pseudogene processed_pseudogene MGP_LPJ_T0082627.1 MGP_LPJ_G0031910.1 mouse_genomes_project 7 29538206 29540493 - MGP_LPJ_P0082627 Ovol3 protein_coding protein_coding MGP_LPJ_T0085371.1 MGP_LPJ_G0032643.1 mouse_genomes_project 7 109470264 109471218 + MGP_LPJ_P0085371 Olfr669 protein_coding protein_coding MGP_LPJ_T0015828.1 MGP_LPJ_G0013919.1 mouse_genomes_project 7 104867399 104867836 + processed_pseudogene processed_pseudogene MGP_LPJ_T0085265.1 MGP_LPJ_G0032569.1 mouse_genomes_project 7 107944252 107945212 - MGP_LPJ_P0085265 Olfr609 protein_coding protein_coding MGP_LPJ_T0082155.1 MGP_LPJ_G0031787.1 mouse_genomes_project 7 25081127 25083264 + MGP_LPJ_P0082155 protein_coding protein_coding MGP_LPJ_T0083746.1 MGP_LPJ_G0032176.1 mouse_genomes_project 7 47813624 47818116 - MGP_LPJ_P0083746 Saa4 protein_coding protein_coding MGP_LPJ_T0015887.1 MGP_LPJ_G0013978.1 mouse_genomes_project 7 146382406 146382878 + processed_pseudogene processed_pseudogene MGP_LPJ_T0083618.1 MGP_LPJ_G0032141.1 mouse_genomes_project 7 46625821 46634607 + MGP_LPJ_P0083618 Izumo1 protein_coding protein_coding MGP_LPJ_T0083619.1 MGP_LPJ_G0032141.1 mouse_genomes_project 7 46629447 46636195 + Izumo1 protein_coding retained_intron MGP_LPJ_T0005162.1 MGP_LPJ_G0004404.1 mouse_genomes_project 7 1083984 1135511 - 9430041J12Rik antisense antisense MGP_LPJ_T0005163.1 MGP_LPJ_G0004404.1 mouse_genomes_project 7 1084014 1134431 - 9430041J12Rik antisense antisense MGP_LPJ_T0005164.1 MGP_LPJ_G0004404.1 mouse_genomes_project 7 1084323 1134431 - 9430041J12Rik antisense antisense MGP_LPJ_T0005165.1 MGP_LPJ_G0004404.1 mouse_genomes_project 7 1133893 1134431 - 9430041J12Rik antisense pseudogene MGP_LPJ_T0084116.1 MGP_LPJ_G0032265.1 mouse_genomes_project 7 70000799 70133352 - MGP_LPJ_P0084116 Lrrc28 protein_coding protein_coding MGP_LPJ_T0084117.1 MGP_LPJ_G0032265.1 mouse_genomes_project 7 70000800 70129318 - MGP_LPJ_P0084117 Lrrc28 protein_coding nonsense_mediated_decay MGP_LPJ_T0084118.1 MGP_LPJ_G0032265.1 mouse_genomes_project 7 70001794 70067957 - Lrrc28 protein_coding processed_transcript MGP_LPJ_T0084119.1 MGP_LPJ_G0032265.1 mouse_genomes_project 7 70016899 70129354 - MGP_LPJ_P0084119 Lrrc28 protein_coding nonsense_mediated_decay MGP_LPJ_T0084120.1 MGP_LPJ_G0032265.1 mouse_genomes_project 7 70017024 70022977 - Lrrc28 protein_coding processed_transcript MGP_LPJ_T0084121.1 MGP_LPJ_G0032265.1 mouse_genomes_project 7 70018971 70108212 - Lrrc28 protein_coding processed_transcript MGP_LPJ_T0084122.1 MGP_LPJ_G0032265.1 mouse_genomes_project 7 70019062 70095523 - Lrrc28 protein_coding processed_transcript MGP_LPJ_T0084123.1 MGP_LPJ_G0032265.1 mouse_genomes_project 7 70019072 70108161 - Lrrc28 protein_coding processed_transcript MGP_LPJ_T0084124.1 MGP_LPJ_G0032265.1 mouse_genomes_project 7 70032351 70133325 - MGP_LPJ_P0084124 Lrrc28 protein_coding protein_coding MGP_LPJ_T0084125.1 MGP_LPJ_G0032265.1 mouse_genomes_project 7 70083619 70133328 - MGP_LPJ_P0084125 Lrrc28 protein_coding protein_coding MGP_LPJ_T0084126.1 MGP_LPJ_G0032265.1 mouse_genomes_project 7 70084621 70108183 - Lrrc28 protein_coding processed_transcript MGP_LPJ_T0084127.1 MGP_LPJ_G0032265.1 mouse_genomes_project 7 70106246 70133389 - MGP_LPJ_P0084127 Lrrc28 protein_coding protein_coding MGP_LPJ_T0018342.1 MGP_LPJ_G0015595.1 mouse_genomes_project 7 78213884 78223705 + 1500012K07Rik processed_transcript lincRNA MGP_LPJ_T0018343.1 MGP_LPJ_G0015595.1 mouse_genomes_project 7 78213890 78234490 + 1500012K07Rik processed_transcript lincRNA MGP_LPJ_T0018344.1 MGP_LPJ_G0015595.1 mouse_genomes_project 7 78213890 78236072 + 1500012K07Rik processed_transcript antisense MGP_LPJ_T0085735.1 MGP_LPJ_G0032789.1 mouse_genomes_project 7 118059458 118062953 + MGP_LPJ_P0085735 Rassf10 protein_coding protein_coding MGP_LPJ_T0018358.1 MGP_LPJ_G0015604.1 mouse_genomes_project 7 121292966 121303460 - 1700003G18Rik processed_transcript sense_overlapping MGP_LPJ_T0018359.1 MGP_LPJ_G0015604.1 mouse_genomes_project 7 121293105 121303407 - 1700003G18Rik processed_transcript sense_overlapping MGP_LPJ_T0018360.1 MGP_LPJ_G0015604.1 mouse_genomes_project 7 121302197 121303399 - 1700003G18Rik processed_transcript retained_intron MGP_LPJ_T0102381.1 MGP_LPJ_G0040417.1 mouse_genomes_project 7 44911609 44914141 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0099724.1 MGP_LPJ_G0037987.1 mouse_genomes_project 7 100936589 100936698 - Gm22226 snRNA snRNA MGP_LPJ_T0082911.1 MGP_LPJ_G0031963.1 mouse_genomes_project 7 30499340 30517766 - MGP_LPJ_P0082911 Hpn protein_coding nonsense_mediated_decay MGP_LPJ_T0082912.1 MGP_LPJ_G0031963.1 mouse_genomes_project 7 30499340 30517773 - MGP_LPJ_P0082912 Hpn protein_coding protein_coding MGP_LPJ_T0082913.1 MGP_LPJ_G0031963.1 mouse_genomes_project 7 30499340 30512073 - MGP_LPJ_P0082913 Hpn protein_coding protein_coding MGP_LPJ_T0082914.1 MGP_LPJ_G0031963.1 mouse_genomes_project 7 30499340 30517781 - MGP_LPJ_P0082914 Hpn protein_coding protein_coding MGP_LPJ_T0082915.1 MGP_LPJ_G0031963.1 mouse_genomes_project 7 30499344 30503122 - MGP_LPJ_P0082915 Hpn protein_coding protein_coding MGP_LPJ_T0082916.1 MGP_LPJ_G0031963.1 mouse_genomes_project 7 30499348 30500193 - MGP_LPJ_P0082916 Hpn protein_coding protein_coding MGP_LPJ_T0082917.1 MGP_LPJ_G0031963.1 mouse_genomes_project 7 30499853 30500899 - Hpn protein_coding retained_intron MGP_LPJ_T0082918.1 MGP_LPJ_G0031963.1 mouse_genomes_project 7 30502800 30503814 - Hpn protein_coding retained_intron MGP_LPJ_T0082919.1 MGP_LPJ_G0031963.1 mouse_genomes_project 7 30503105 30504087 - Hpn protein_coding retained_intron MGP_LPJ_T0082920.1 MGP_LPJ_G0031963.1 mouse_genomes_project 7 30510346 30513034 - MGP_LPJ_P0082920 Hpn protein_coding protein_coding MGP_LPJ_T0082921.1 MGP_LPJ_G0031963.1 mouse_genomes_project 7 30511641 30512085 - Hpn protein_coding retained_intron MGP_LPJ_T0085223.1 MGP_LPJ_G0032531.1 mouse_genomes_project 7 107079766 107080823 + MGP_LPJ_P0085223 Olfr557 protein_coding protein_coding MGP_LPJ_T0082530.1 MGP_LPJ_G0031885.1 mouse_genomes_project 7 28544221 28607966 - MGP_LPJ_P0082530 Sipa1l3 protein_coding protein_coding MGP_LPJ_T0082531.1 MGP_LPJ_G0031885.1 mouse_genomes_project 7 28544227 28583723 - Sipa1l3 protein_coding retained_intron MGP_LPJ_T0082532.1 MGP_LPJ_G0031885.1 mouse_genomes_project 7 28544227 28740456 - MGP_LPJ_P0082532 Sipa1l3 protein_coding protein_coding MGP_LPJ_T0082533.1 MGP_LPJ_G0031885.1 mouse_genomes_project 7 28544227 28740456 - MGP_LPJ_P0082533 Sipa1l3 protein_coding protein_coding MGP_LPJ_T0082534.1 MGP_LPJ_G0031885.1 mouse_genomes_project 7 28546852 28583645 - Sipa1l3 protein_coding retained_intron MGP_LPJ_T0082535.1 MGP_LPJ_G0031885.1 mouse_genomes_project 7 28547345 28556011 - MGP_LPJ_P0082535 Sipa1l3 protein_coding protein_coding MGP_LPJ_T0082536.1 MGP_LPJ_G0031885.1 mouse_genomes_project 7 28547640 28598173 - MGP_LPJ_P0082536 Sipa1l3 protein_coding protein_coding MGP_LPJ_T0082537.1 MGP_LPJ_G0031885.1 mouse_genomes_project 7 28548944 28568892 - Sipa1l3 protein_coding retained_intron MGP_LPJ_T0082538.1 MGP_LPJ_G0031885.1 mouse_genomes_project 7 28558126 28566087 - Sipa1l3 protein_coding retained_intron MGP_LPJ_T0082539.1 MGP_LPJ_G0031885.1 mouse_genomes_project 7 28595939 28597646 - Sipa1l3 protein_coding retained_intron MGP_LPJ_T0082540.1 MGP_LPJ_G0031885.1 mouse_genomes_project 7 28597058 28598181 - MGP_LPJ_P0082540 Sipa1l3 protein_coding protein_coding MGP_LPJ_T0082541.1 MGP_LPJ_G0031885.1 mouse_genomes_project 7 28601138 28608106 - Sipa1l3 protein_coding retained_intron MGP_LPJ_T0082542.1 MGP_LPJ_G0031885.1 mouse_genomes_project 7 28614633 28740448 - Sipa1l3 protein_coding processed_transcript MGP_LPJ_T0082543.1 MGP_LPJ_G0031885.1 mouse_genomes_project 7 28632094 28753559 - MGP_LPJ_P0082543 Sipa1l3 protein_coding protein_coding MGP_LPJ_T0082544.1 MGP_LPJ_G0031885.1 mouse_genomes_project 7 28632199 28753588 - Sipa1l3 protein_coding processed_transcript MGP_LPJ_T0082545.1 MGP_LPJ_G0031885.1 mouse_genomes_project 7 28632272 28753562 - Sipa1l3 protein_coding processed_transcript MGP_LPJ_T0082546.1 MGP_LPJ_G0031885.1 mouse_genomes_project 7 28728467 28753507 - Sipa1l3 protein_coding processed_transcript MGP_LPJ_T0082547.1 MGP_LPJ_G0031885.1 mouse_genomes_project 7 28751717 28753502 - Sipa1l3 protein_coding processed_transcript MGP_LPJ_T0083298.1 MGP_LPJ_G0032066.1 mouse_genomes_project 7 45196856 45216586 - MGP_LPJ_P0083298 1700008O03Rik protein_coding protein_coding MGP_LPJ_T0083299.1 MGP_LPJ_G0032066.1 mouse_genomes_project 7 45196912 45216070 - 1700008O03Rik protein_coding retained_intron MGP_LPJ_T0083300.1 MGP_LPJ_G0032066.1 mouse_genomes_project 7 45197050 45215156 - MGP_LPJ_P0083300 1700008O03Rik protein_coding protein_coding MGP_LPJ_T0083301.1 MGP_LPJ_G0032066.1 mouse_genomes_project 7 45200793 45227240 - 1700008O03Rik protein_coding processed_transcript MGP_LPJ_T0083302.1 MGP_LPJ_G0032066.1 mouse_genomes_project 7 45220439 45227376 - 1700008O03Rik protein_coding processed_transcript MGP_LPJ_T0085754.1 MGP_LPJ_G0032794.1 mouse_genomes_project 7 118868339 118868825 - MGP_LPJ_P0085754 protein_coding protein_coding MGP_LPJ_T0015692.1 MGP_LPJ_G0013783.1 mouse_genomes_project 7 24191215 24192167 - processed_pseudogene processed_pseudogene MGP_LPJ_T0083788.1 MGP_LPJ_G0032187.1 mouse_genomes_project 7 48177295 48181428 + MGP_LPJ_P0083788 Tmem86a protein_coding protein_coding MGP_LPJ_T0087049.1 MGP_LPJ_G0033056.1 mouse_genomes_project 7 143911176 143942820 + MGP_LPJ_P0087049 Glrx3 protein_coding protein_coding MGP_LPJ_T0087613.1 MGP_LPJ_G0033191.1 mouse_genomes_project 7 150333839 150369356 - MGP_LPJ_P0087613 Nap1l4 protein_coding protein_coding MGP_LPJ_T0083471.1 MGP_LPJ_G0032103.1 mouse_genomes_project 7 45960071 45970472 - MGP_LPJ_P0083471 Prrg2 protein_coding unknown_likely_coding MGP_LPJ_T0015810.1 MGP_LPJ_G0013901.1 mouse_genomes_project 7 98046479 98046749 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102364.1 MGP_LPJ_G0040400.1 mouse_genomes_project 7 41054752 41057378 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0015813.1 MGP_LPJ_G0013904.1 mouse_genomes_project 7 99407989 99409437 + processed_pseudogene processed_pseudogene MGP_LPJ_T0083229.1 MGP_LPJ_G0032036.1 mouse_genomes_project 7 44365417 44377057 + MGP_LPJ_P0083229 Zfp819 protein_coding protein_coding MGP_LPJ_T0083230.1 MGP_LPJ_G0032036.1 mouse_genomes_project 7 44365457 44370359 + MGP_LPJ_P0083230 Zfp819 protein_coding protein_coding MGP_LPJ_T0083231.1 MGP_LPJ_G0032036.1 mouse_genomes_project 7 44365473 44377126 + MGP_LPJ_P0083231 Zfp819 protein_coding protein_coding MGP_LPJ_T0083232.1 MGP_LPJ_G0032036.1 mouse_genomes_project 7 44368156 44376759 + MGP_LPJ_P0083232 Zfp819 protein_coding protein_coding MGP_LPJ_T0002299.1 MGP_LPJ_G0002207.1 mouse_genomes_project 7 82603222 82606429 + TEC TEC MGP_LPJ_T0082581.1 MGP_LPJ_G0031896.1 mouse_genomes_project 7 29231444 29233800 + MGP_LPJ_P0082581 protein_coding protein_coding MGP_LPJ_T0009047.1 MGP_LPJ_G0007281.1 mouse_genomes_project 7 133262934 133267821 + Gm45184 lincRNA lincRNA MGP_LPJ_T0015851.1 MGP_LPJ_G0013942.1 mouse_genomes_project 7 126021654 126022505 + processed_pseudogene processed_pseudogene MGP_LPJ_T0085560.1 MGP_LPJ_G0032737.1 mouse_genomes_project 7 113413460 113414453 + MGP_LPJ_P0085560 Olfr498 protein_coding protein_coding MGP_LPJ_T0015797.1 MGP_LPJ_G0013888.1 mouse_genomes_project 7 84158454 84158778 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102418.1 MGP_LPJ_G0040454.1 mouse_genomes_project 7 88926862 88931915 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0099728.1 MGP_LPJ_G0037991.1 mouse_genomes_project 7 114039517 114039624 - Gm25450 snRNA snRNA MGP_LPJ_T0083801.1 MGP_LPJ_G0032196.1 mouse_genomes_project 7 49953959 49955082 + MGP_LPJ_P0083801 Mrgprb8 protein_coding protein_coding MGP_LPJ_T0008832.1 MGP_LPJ_G0007134.1 mouse_genomes_project 7 24368578 24375196 + lincRNA lincRNA MGP_LPJ_T0081625.1 MGP_LPJ_G0031630.1 mouse_genomes_project 7 15113294 15147434 + MGP_LPJ_P0081625 protein_coding protein_coding MGP_LPJ_T0081626.1 MGP_LPJ_G0031630.1 mouse_genomes_project 7 15113371 15144213 + protein_coding retained_intron MGP_LPJ_T0081627.1 MGP_LPJ_G0031630.1 mouse_genomes_project 7 15136241 15142256 + MGP_LPJ_P0081627 protein_coding protein_coding MGP_LPJ_T0082834.1 MGP_LPJ_G0031952.1 mouse_genomes_project 7 30259802 30275896 - MGP_LPJ_P0082834 Mag protein_coding protein_coding MGP_LPJ_T0082835.1 MGP_LPJ_G0031952.1 mouse_genomes_project 7 30259809 30275547 - MGP_LPJ_P0082835 Mag protein_coding protein_coding MGP_LPJ_T0082836.1 MGP_LPJ_G0031952.1 mouse_genomes_project 7 30260157 30275528 - MGP_LPJ_P0082836 Mag protein_coding protein_coding MGP_LPJ_T0082837.1 MGP_LPJ_G0031952.1 mouse_genomes_project 7 30260212 30275528 - MGP_LPJ_P0082837 Mag protein_coding protein_coding MGP_LPJ_T0082838.1 MGP_LPJ_G0031952.1 mouse_genomes_project 7 30268872 30275937 - Mag protein_coding retained_intron MGP_LPJ_T0082839.1 MGP_LPJ_G0031952.1 mouse_genomes_project 7 30270435 30275929 - MGP_LPJ_P0082839 Mag protein_coding protein_coding MGP_LPJ_T0082840.1 MGP_LPJ_G0031952.1 mouse_genomes_project 7 30272844 30275888 - MGP_LPJ_P0082840 Mag protein_coding protein_coding MGP_LPJ_T0082841.1 MGP_LPJ_G0031952.1 mouse_genomes_project 7 30273221 30275909 - Mag protein_coding processed_transcript MGP_LPJ_T0085040.1 MGP_LPJ_G0032490.1 mouse_genomes_project 7 105572510 105585186 - MGP_LPJ_P0085040 Atg16l2 protein_coding nonsense_mediated_decay MGP_LPJ_T0085041.1 MGP_LPJ_G0032490.1 mouse_genomes_project 7 105572733 105585247 - MGP_LPJ_P0085041 Atg16l2 protein_coding protein_coding MGP_LPJ_T0085042.1 MGP_LPJ_G0032490.1 mouse_genomes_project 7 105572735 105573578 - Atg16l2 protein_coding retained_intron MGP_LPJ_T0085043.1 MGP_LPJ_G0032490.1 mouse_genomes_project 7 105572735 105585230 - MGP_LPJ_P0085043 Atg16l2 protein_coding protein_coding MGP_LPJ_T0085044.1 MGP_LPJ_G0032490.1 mouse_genomes_project 7 105572744 105585410 - MGP_LPJ_P0085044 Atg16l2 protein_coding nonsense_mediated_decay MGP_LPJ_T0085045.1 MGP_LPJ_G0032490.1 mouse_genomes_project 7 105572946 105573695 - Atg16l2 protein_coding retained_intron MGP_LPJ_T0085046.1 MGP_LPJ_G0032490.1 mouse_genomes_project 7 105572965 105585186 - MGP_LPJ_P0085046 Atg16l2 protein_coding unknown_likely_coding MGP_LPJ_T0085047.1 MGP_LPJ_G0032490.1 mouse_genomes_project 7 105573762 105575262 - Atg16l2 protein_coding retained_intron MGP_LPJ_T0085048.1 MGP_LPJ_G0032490.1 mouse_genomes_project 7 105574279 105575265 - Atg16l2 protein_coding retained_intron MGP_LPJ_T0085049.1 MGP_LPJ_G0032490.1 mouse_genomes_project 7 105574693 105575507 - Atg16l2 protein_coding retained_intron MGP_LPJ_T0085050.1 MGP_LPJ_G0032490.1 mouse_genomes_project 7 105575122 105579943 - Atg16l2 protein_coding retained_intron MGP_LPJ_T0085051.1 MGP_LPJ_G0032490.1 mouse_genomes_project 7 105575521 105579956 - MGP_LPJ_P0085051 Atg16l2 protein_coding protein_coding MGP_LPJ_T0085052.1 MGP_LPJ_G0032490.1 mouse_genomes_project 7 105576385 105579886 - Atg16l2 protein_coding retained_intron MGP_LPJ_T0085053.1 MGP_LPJ_G0032490.1 mouse_genomes_project 7 105579401 105580343 - Atg16l2 protein_coding retained_intron MGP_LPJ_T0085054.1 MGP_LPJ_G0032490.1 mouse_genomes_project 7 105580068 105585230 - MGP_LPJ_P0085054 Atg16l2 protein_coding nonsense_mediated_decay MGP_LPJ_T0082398.1 MGP_LPJ_G0031855.1 mouse_genomes_project 7 27741092 27766163 - MGP_LPJ_P0082398 Acp7 protein_coding protein_coding MGP_LPJ_T0082399.1 MGP_LPJ_G0031855.1 mouse_genomes_project 7 27751959 27765603 - Acp7 protein_coding processed_transcript MGP_LPJ_T0082400.1 MGP_LPJ_G0031855.1 mouse_genomes_project 7 27752448 27765603 - Acp7 protein_coding processed_transcript MGP_LPJ_T0082401.1 MGP_LPJ_G0031855.1 mouse_genomes_project 7 27764586 27765596 - Acp7 protein_coding processed_transcript MGP_LPJ_T0082402.1 MGP_LPJ_G0031855.1 mouse_genomes_project 7 27764619 27766428 - Acp7 protein_coding processed_transcript MGP_LPJ_T0081301.1 MGP_LPJ_G0031512.1 mouse_genomes_project 7 3684603 3691745 - MGP_LPJ_P0081301 Olfr5 protein_coding protein_coding MGP_LPJ_T0085279.1 MGP_LPJ_G0032582.1 mouse_genomes_project 7 108173221 108174354 - MGP_LPJ_P0085279 Olfr624 protein_coding protein_coding MGP_LPJ_T0027407.1 MGP_LPJ_G0017770.1 mouse_genomes_project 10 132622667 132641065 + MGP_LPJ_P0027407 Pan2 protein_coding protein_coding MGP_LPJ_T0027408.1 MGP_LPJ_G0017770.1 mouse_genomes_project 10 132623544 132641059 + MGP_LPJ_P0027408 Pan2 protein_coding unknown_likely_coding MGP_LPJ_T0026393.1 MGP_LPJ_G0017470.1 mouse_genomes_project 10 82554303 82556107 + MGP_LPJ_P0026393 Smim24 protein_coding protein_coding MGP_LPJ_T0026394.1 MGP_LPJ_G0017470.1 mouse_genomes_project 10 82554864 82556352 + Smim24 protein_coding processed_transcript MGP_LPJ_T0025849.1 MGP_LPJ_G0017324.1 mouse_genomes_project 10 78739993 78747051 - MGP_LPJ_P0025849 Lrrc3 protein_coding protein_coding MGP_LPJ_T0100064.1 MGP_LPJ_G0038327.1 mouse_genomes_project 10 21692695 21692769 - Gm23130 snoRNA snoRNA MGP_LPJ_T0101757.1 MGP_LPJ_G0039795.1 mouse_genomes_project 10 134595047 134595799 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0025188.1 MGP_LPJ_G0017167.1 mouse_genomes_project 10 58757574 58762056 + MGP_LPJ_P0025188 Sowahc protein_coding protein_coding MGP_LPJ_T0011282.1 MGP_LPJ_G0009400.1 mouse_genomes_project 10 10343333 10343570 - Gm27741 misc_RNA misc_RNA MGP_LPJ_T0027168.1 MGP_LPJ_G0017696.1 mouse_genomes_project 10 125398588 125444785 - MGP_LPJ_P0027168 Xpot protein_coding protein_coding MGP_LPJ_T0027169.1 MGP_LPJ_G0017696.1 mouse_genomes_project 10 125404943 125444851 - MGP_LPJ_P0027169 Xpot protein_coding unknown_likely_coding MGP_LPJ_T0011297.1 MGP_LPJ_G0009415.1 mouse_genomes_project 10 94087338 94087464 - Gm27582 misc_RNA misc_RNA MGP_LPJ_T0012398.1 MGP_LPJ_G0010489.1 mouse_genomes_project 10 29811192 29811828 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012397.1 MGP_LPJ_G0010488.1 mouse_genomes_project 10 24748059 24749071 - processed_pseudogene processed_pseudogene MGP_LPJ_T0025832.1 MGP_LPJ_G0017312.1 mouse_genomes_project 10 78424845 78446951 + MGP_LPJ_P0025832 Ube2g2 protein_coding nonsense_mediated_decay MGP_LPJ_T0025833.1 MGP_LPJ_G0017312.1 mouse_genomes_project 10 78424896 78448390 + MGP_LPJ_P0025833 Ube2g2 protein_coding protein_coding MGP_LPJ_T0025834.1 MGP_LPJ_G0017312.1 mouse_genomes_project 10 78424900 78443892 + MGP_LPJ_P0025834 Ube2g2 protein_coding protein_coding MGP_LPJ_T0025835.1 MGP_LPJ_G0017312.1 mouse_genomes_project 10 78443577 78446900 + Ube2g2 protein_coding retained_intron MGP_LPJ_T0098106.1 MGP_LPJ_G0036387.1 mouse_genomes_project 10 43565185 43565296 + Gm27977 rRNA rRNA MGP_LPJ_T0006171.1 MGP_LPJ_G0005153.1 mouse_genomes_project 10 105669099 105669962 - Gm17028 lincRNA lincRNA MGP_LPJ_T0025845.1 MGP_LPJ_G0017322.1 mouse_genomes_project 10 78638696 78639152 - MGP_LPJ_P0025845 protein_coding protein_coding MGP_LPJ_T0026080.1 MGP_LPJ_G0017394.1 mouse_genomes_project 10 81175865 81190981 + MGP_LPJ_P0026080 Stk11 protein_coding nonsense_mediated_decay MGP_LPJ_T0026081.1 MGP_LPJ_G0017394.1 mouse_genomes_project 10 81175865 81191194 + MGP_LPJ_P0026081 Stk11 protein_coding protein_coding MGP_LPJ_T0026082.1 MGP_LPJ_G0017394.1 mouse_genomes_project 10 81176409 81190982 + MGP_LPJ_P0026082 Stk11 protein_coding nonsense_mediated_decay MGP_LPJ_T0026083.1 MGP_LPJ_G0017394.1 mouse_genomes_project 10 81176416 81177877 + Stk11 protein_coding processed_transcript MGP_LPJ_T0026084.1 MGP_LPJ_G0017394.1 mouse_genomes_project 10 81185330 81190487 + Stk11 protein_coding retained_intron MGP_LPJ_T0026085.1 MGP_LPJ_G0017394.1 mouse_genomes_project 10 81185886 81187021 + Stk11 protein_coding retained_intron MGP_LPJ_T0026086.1 MGP_LPJ_G0017394.1 mouse_genomes_project 10 81185886 81191187 + MGP_LPJ_P0026086 Stk11 protein_coding protein_coding MGP_LPJ_T0026087.1 MGP_LPJ_G0017394.1 mouse_genomes_project 10 81186897 81188711 + Stk11 protein_coding retained_intron MGP_LPJ_T0026088.1 MGP_LPJ_G0017394.1 mouse_genomes_project 10 81187193 81190982 + MGP_LPJ_P0026088 Stk11 protein_coding protein_coding MGP_LPJ_T0026856.1 MGP_LPJ_G0017580.1 mouse_genomes_project 10 96913524 97080045 - MGP_LPJ_P0026856 Plxnc1 protein_coding protein_coding MGP_LPJ_T0026857.1 MGP_LPJ_G0017580.1 mouse_genomes_project 10 96960577 96967174 - Plxnc1 protein_coding retained_intron MGP_LPJ_T0026858.1 MGP_LPJ_G0017580.1 mouse_genomes_project 10 96977815 96994392 - MGP_LPJ_P0026858 Plxnc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0026859.1 MGP_LPJ_G0017580.1 mouse_genomes_project 10 96994173 97055915 - Plxnc1 protein_coding retained_intron MGP_LPJ_T0024584.1 MGP_LPJ_G0016951.1 mouse_genomes_project 10 15543788 15617259 + MGP_LPJ_P0024584 Reps1 protein_coding protein_coding MGP_LPJ_T0024585.1 MGP_LPJ_G0016951.1 mouse_genomes_project 10 15543833 15617273 + MGP_LPJ_P0024585 Reps1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024586.1 MGP_LPJ_G0016951.1 mouse_genomes_project 10 15543867 15617284 + MGP_LPJ_P0024586 Reps1 protein_coding protein_coding MGP_LPJ_T0024587.1 MGP_LPJ_G0016951.1 mouse_genomes_project 10 15543890 15617200 + MGP_LPJ_P0024587 Reps1 protein_coding protein_coding MGP_LPJ_T0024588.1 MGP_LPJ_G0016951.1 mouse_genomes_project 10 15581534 15595050 + Reps1 protein_coding retained_intron MGP_LPJ_T0024589.1 MGP_LPJ_G0016951.1 mouse_genomes_project 10 15583237 15594211 + MGP_LPJ_P0024589 Reps1 protein_coding protein_coding MGP_LPJ_T0024590.1 MGP_LPJ_G0016951.1 mouse_genomes_project 10 15584597 15607757 + MGP_LPJ_P0024590 Reps1 protein_coding protein_coding MGP_LPJ_T0024591.1 MGP_LPJ_G0016951.1 mouse_genomes_project 10 15604505 15612441 + Reps1 protein_coding retained_intron MGP_LPJ_T0024592.1 MGP_LPJ_G0016951.1 mouse_genomes_project 10 15613183 15613934 + Reps1 protein_coding retained_intron MGP_LPJ_T0009655.1 MGP_LPJ_G0007773.1 mouse_genomes_project 10 132709145 132709214 + Mir6914 miRNA miRNA MGP_LPJ_T0025036.1 MGP_LPJ_G0017107.1 mouse_genomes_project 10 41934862 41936701 + MGP_LPJ_P0025036 9030612E09Rik protein_coding protein_coding MGP_LPJ_T0098108.1 MGP_LPJ_G0036389.1 mouse_genomes_project 10 79415819 79415935 + Gm25164 rRNA rRNA MGP_LPJ_T0027502.1 MGP_LPJ_G0017815.1 mouse_genomes_project 10 133671116 133673281 - MGP_LPJ_P0027502 Olfr777 protein_coding protein_coding MGP_LPJ_T0027503.1 MGP_LPJ_G0017815.1 mouse_genomes_project 10 133671116 133672052 - MGP_LPJ_P0027503 Olfr777 protein_coding protein_coding MGP_LPJ_T0024436.1 MGP_LPJ_G0016914.1 mouse_genomes_project 10 4793584 4832389 + MGP_LPJ_P0024436 Katna1 protein_coding protein_coding MGP_LPJ_T0024437.1 MGP_LPJ_G0016914.1 mouse_genomes_project 10 4793584 4832390 + MGP_LPJ_P0024437 Katna1 protein_coding protein_coding MGP_LPJ_T0024438.1 MGP_LPJ_G0016914.1 mouse_genomes_project 10 4793592 4821264 + MGP_LPJ_P0024438 Katna1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024439.1 MGP_LPJ_G0016914.1 mouse_genomes_project 10 4817389 4829478 + Katna1 protein_coding retained_intron MGP_LPJ_T0024440.1 MGP_LPJ_G0016914.1 mouse_genomes_project 10 4829016 4832304 + MGP_LPJ_P0024440 Katna1 protein_coding protein_coding MGP_LPJ_T0024441.1 MGP_LPJ_G0016914.1 mouse_genomes_project 10 4830473 4832388 + MGP_LPJ_P0024441 Katna1 protein_coding protein_coding MGP_LPJ_T0026422.1 MGP_LPJ_G0017477.1 mouse_genomes_project 10 82739365 82748631 + MGP_LPJ_P0026422 Aes protein_coding protein_coding MGP_LPJ_T0026208.1 MGP_LPJ_G0017416.1 mouse_genomes_project 10 81585373 81611773 + MGP_LPJ_P0026208 Onecut3 protein_coding protein_coding MGP_LPJ_T0024942.1 MGP_LPJ_G0017088.1 mouse_genomes_project 10 40079744 40094941 + MGP_LPJ_P0024942 Zbtb24 protein_coding protein_coding MGP_LPJ_T0025858.1 MGP_LPJ_G0017326.1 mouse_genomes_project 10 78833000 78840524 + MGP_LPJ_P0025858 1810043G02Rik protein_coding protein_coding MGP_LPJ_T0025859.1 MGP_LPJ_G0017326.1 mouse_genomes_project 10 78833130 78840345 + 1810043G02Rik protein_coding retained_intron MGP_LPJ_T0025860.1 MGP_LPJ_G0017326.1 mouse_genomes_project 10 78833147 78840524 + 1810043G02Rik protein_coding retained_intron MGP_LPJ_T0025861.1 MGP_LPJ_G0017326.1 mouse_genomes_project 10 78833149 78841995 + MGP_LPJ_P0025861 1810043G02Rik protein_coding protein_coding MGP_LPJ_T0025862.1 MGP_LPJ_G0017326.1 mouse_genomes_project 10 78833157 78840526 + 1810043G02Rik protein_coding retained_intron MGP_LPJ_T0025863.1 MGP_LPJ_G0017326.1 mouse_genomes_project 10 78833169 78834999 + 1810043G02Rik protein_coding processed_transcript MGP_LPJ_T0025864.1 MGP_LPJ_G0017326.1 mouse_genomes_project 10 78834969 78839569 + 1810043G02Rik protein_coding processed_transcript MGP_LPJ_T0025865.1 MGP_LPJ_G0017326.1 mouse_genomes_project 10 78836849 78837982 + 1810043G02Rik protein_coding processed_transcript MGP_LPJ_T0003062.1 MGP_LPJ_G0002862.1 mouse_genomes_project 10 68234306 68236157 - antisense antisense MGP_LPJ_T0003063.1 MGP_LPJ_G0002862.1 mouse_genomes_project 10 68234883 68236483 - antisense antisense MGP_LPJ_T0026867.1 MGP_LPJ_G0017583.1 mouse_genomes_project 10 97592110 97595947 - MGP_LPJ_P0026867 Socs2 protein_coding protein_coding MGP_LPJ_T0026628.1 MGP_LPJ_G0017532.1 mouse_genomes_project 10 89198904 89201746 - MGP_LPJ_P0026628 Ascl1 protein_coding protein_coding MGP_LPJ_T0017043.1 MGP_LPJ_G0015047.1 mouse_genomes_project 10 35544091 35548678 + 5930403N24Rik processed_transcript retained_intron MGP_LPJ_T0017044.1 MGP_LPJ_G0015047.1 mouse_genomes_project 10 35544247 35546991 + 5930403N24Rik processed_transcript processed_transcript MGP_LPJ_T0017045.1 MGP_LPJ_G0015047.1 mouse_genomes_project 10 35544603 35556552 + 5930403N24Rik processed_transcript lincRNA MGP_LPJ_T0027156.1 MGP_LPJ_G0017689.1 mouse_genomes_project 10 124520838 124596070 - Msrb3 protein_coding processed_transcript MGP_LPJ_T0027157.1 MGP_LPJ_G0017689.1 mouse_genomes_project 10 124520980 124618184 - MGP_LPJ_P0027157 Msrb3 protein_coding protein_coding MGP_LPJ_T0027158.1 MGP_LPJ_G0017689.1 mouse_genomes_project 10 124521154 124649804 - MGP_LPJ_P0027158 Msrb3 protein_coding protein_coding MGP_LPJ_T0026790.1 MGP_LPJ_G0017562.1 mouse_genomes_project 10 95162619 95242541 + MGP_LPJ_P0026790 Cdk17 protein_coding protein_coding MGP_LPJ_T0026495.1 MGP_LPJ_G0017491.1 mouse_genomes_project 10 84044246 84087084 - MGP_LPJ_P0026495 Glt8d2 protein_coding protein_coding MGP_LPJ_T0026496.1 MGP_LPJ_G0017491.1 mouse_genomes_project 10 84045119 84047281 - Glt8d2 protein_coding retained_intron MGP_LPJ_T0026497.1 MGP_LPJ_G0017491.1 mouse_genomes_project 10 84045372 84055217 - MGP_LPJ_P0026497 Glt8d2 protein_coding protein_coding MGP_LPJ_T0026498.1 MGP_LPJ_G0017491.1 mouse_genomes_project 10 84046609 84087051 - MGP_LPJ_P0026498 Glt8d2 protein_coding protein_coding MGP_LPJ_T0026499.1 MGP_LPJ_G0017491.1 mouse_genomes_project 10 84048861 84087051 - MGP_LPJ_P0026499 Glt8d2 protein_coding nonsense_mediated_decay MGP_LPJ_T0026500.1 MGP_LPJ_G0017491.1 mouse_genomes_project 10 84060304 84066133 - MGP_LPJ_P0026500 Glt8d2 protein_coding protein_coding MGP_LPJ_T0026501.1 MGP_LPJ_G0017491.1 mouse_genomes_project 10 84064919 84087063 - Glt8d2 protein_coding retained_intron MGP_LPJ_T0024781.1 MGP_LPJ_G0017022.1 mouse_genomes_project 10 26182449 26721403 + MGP_LPJ_P0024781 Ptprk protein_coding protein_coding MGP_LPJ_T0024782.1 MGP_LPJ_G0017022.1 mouse_genomes_project 10 26593296 26721332 + MGP_LPJ_P0024782 Ptprk protein_coding unknown_likely_coding MGP_LPJ_T0024722.1 MGP_LPJ_G0017003.1 mouse_genomes_project 10 22022341 22025388 + MGP_LPJ_P0024722 protein_coding protein_coding MGP_LPJ_T0100057.1 MGP_LPJ_G0038320.1 mouse_genomes_project 10 9141097 9141223 + Gm25011 snoRNA snoRNA MGP_LPJ_T0025259.1 MGP_LPJ_G0017183.1 mouse_genomes_project 10 60027673 60033328 + MGP_LPJ_P0025259 Gm17455 protein_coding protein_coding MGP_LPJ_T0000867.1 MGP_LPJ_G0000796.1 mouse_genomes_project 10 117597659 117597974 + TEC TEC MGP_LPJ_T0027012.1 MGP_LPJ_G0017643.1 mouse_genomes_project 10 116117160 116120733 - MGP_LPJ_P0027012 Atxn7l3b protein_coding protein_coding MGP_LPJ_T0027013.1 MGP_LPJ_G0017643.1 mouse_genomes_project 10 116119525 116120739 - Atxn7l3b protein_coding processed_transcript MGP_LPJ_T0098471.1 MGP_LPJ_G0036751.1 mouse_genomes_project 10 124539037 124540177 - Gm15961 sense_intronic sense_intronic MGP_LPJ_T0026079.1 MGP_LPJ_G0017393.1 mouse_genomes_project 10 81114036 81162287 - MGP_LPJ_P0026079 Sbno2 protein_coding protein_coding MGP_LPJ_T0098832.1 MGP_LPJ_G0037095.1 mouse_genomes_project 10 38245752 38245868 + Gm22105 snRNA snRNA MGP_LPJ_T0026778.1 MGP_LPJ_G0017561.1 mouse_genomes_project 10 94766746 95077141 - MGP_LPJ_P0026778 Cfap54 protein_coding protein_coding MGP_LPJ_T0026779.1 MGP_LPJ_G0017561.1 mouse_genomes_project 10 94767306 95077119 - MGP_LPJ_P0026779 Cfap54 protein_coding unknown_likely_coding MGP_LPJ_T0026780.1 MGP_LPJ_G0017561.1 mouse_genomes_project 10 94767306 95039442 - MGP_LPJ_P0026780 Cfap54 protein_coding unknown_likely_coding MGP_LPJ_T0026781.1 MGP_LPJ_G0017561.1 mouse_genomes_project 10 94787787 94831469 - MGP_LPJ_P0026781 Cfap54 protein_coding nonsense_mediated_decay MGP_LPJ_T0026782.1 MGP_LPJ_G0017561.1 mouse_genomes_project 10 94892897 94932144 - Cfap54 protein_coding processed_transcript MGP_LPJ_T0026783.1 MGP_LPJ_G0017561.1 mouse_genomes_project 10 94908210 94932152 - MGP_LPJ_P0026783 Cfap54 protein_coding protein_coding MGP_LPJ_T0026784.1 MGP_LPJ_G0017561.1 mouse_genomes_project 10 94965382 95034987 - MGP_LPJ_P0026784 Cfap54 protein_coding nonsense_mediated_decay MGP_LPJ_T0026785.1 MGP_LPJ_G0017561.1 mouse_genomes_project 10 95021266 95024653 - Cfap54 protein_coding processed_transcript MGP_LPJ_T0026786.1 MGP_LPJ_G0017561.1 mouse_genomes_project 10 95028728 95077141 - MGP_LPJ_P0026786 Cfap54 protein_coding protein_coding MGP_LPJ_T0026787.1 MGP_LPJ_G0017561.1 mouse_genomes_project 10 95035584 95077119 - MGP_LPJ_P0026787 Cfap54 protein_coding protein_coding MGP_LPJ_T0026788.1 MGP_LPJ_G0017561.1 mouse_genomes_project 10 95055762 95077141 - Cfap54 protein_coding retained_intron MGP_LPJ_T0026789.1 MGP_LPJ_G0017561.1 mouse_genomes_project 10 95061369 95064864 - Cfap54 protein_coding processed_transcript MGP_LPJ_T0025988.1 MGP_LPJ_G0017371.1 mouse_genomes_project 10 80804701 80810064 + MGP_LPJ_P0025988 Fstl3 protein_coding protein_coding MGP_LPJ_T0025989.1 MGP_LPJ_G0017371.1 mouse_genomes_project 10 80804721 80806527 + Fstl3 protein_coding retained_intron MGP_LPJ_T0025990.1 MGP_LPJ_G0017371.1 mouse_genomes_project 10 80808014 80810041 + Fstl3 protein_coding processed_transcript MGP_LPJ_T0027322.1 MGP_LPJ_G0017741.1 mouse_genomes_project 10 131861405 131867187 - MGP_LPJ_P0027322 Nab2 protein_coding protein_coding MGP_LPJ_T0027323.1 MGP_LPJ_G0017741.1 mouse_genomes_project 10 131861408 131867109 - MGP_LPJ_P0027323 Nab2 protein_coding protein_coding MGP_LPJ_T0027324.1 MGP_LPJ_G0017741.1 mouse_genomes_project 10 131865401 131865958 - MGP_LPJ_P0027324 Nab2 protein_coding protein_coding MGP_LPJ_T0027325.1 MGP_LPJ_G0017741.1 mouse_genomes_project 10 131865460 131869042 - MGP_LPJ_P0027325 Nab2 protein_coding protein_coding MGP_LPJ_T0026810.1 MGP_LPJ_G0017571.1 mouse_genomes_project 10 95875889 95894424 + MGP_LPJ_P0026810 Usp44 protein_coding protein_coding MGP_LPJ_T0098853.1 MGP_LPJ_G0037116.1 mouse_genomes_project 10 81035466 81035573 + Gm26243 snRNA snRNA MGP_LPJ_T0025049.1 MGP_LPJ_G0017112.1 mouse_genomes_project 10 42392017 42433094 + MGP_LPJ_P0025049 F930017D23Rik protein_coding protein_coding MGP_LPJ_T0026879.1 MGP_LPJ_G0017592.1 mouse_genomes_project 10 99936184 99942668 + MGP_LPJ_P0026879 Kera protein_coding protein_coding MGP_LPJ_T0006099.1 MGP_LPJ_G0005106.1 mouse_genomes_project 10 19013538 19021618 + 1700021A07Rik lincRNA lincRNA MGP_LPJ_T0006100.1 MGP_LPJ_G0005106.1 mouse_genomes_project 10 19013626 19020797 + 1700021A07Rik lincRNA lincRNA MGP_LPJ_T0006101.1 MGP_LPJ_G0005106.1 mouse_genomes_project 10 19020392 19020701 + 1700021A07Rik lincRNA lincRNA MGP_LPJ_T0026718.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 91724909 92870343 + MGP_LPJ_P0026718 protein_coding protein_coding MGP_LPJ_T0026719.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 91724938 92387541 + MGP_LPJ_P0026719 protein_coding protein_coding MGP_LPJ_T0026720.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 91725038 92866516 + MGP_LPJ_P0026720 protein_coding nonsense_mediated_decay MGP_LPJ_T0026721.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 91725072 92568349 + MGP_LPJ_P0026721 protein_coding protein_coding MGP_LPJ_T0026722.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 91846636 91886047 + protein_coding processed_transcript MGP_LPJ_T0026723.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 91901332 91923838 + protein_coding processed_transcript MGP_LPJ_T0026724.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 91923870 91932182 + MGP_LPJ_P0026724 protein_coding protein_coding MGP_LPJ_T0026725.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 92454048 92873424 + MGP_LPJ_P0026725 protein_coding protein_coding MGP_LPJ_T0026726.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 92454564 92820799 + MGP_LPJ_P0026726 protein_coding protein_coding MGP_LPJ_T0026727.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 92454688 92870382 + MGP_LPJ_P0026727 protein_coding protein_coding MGP_LPJ_T0026728.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 92454826 92871583 + MGP_LPJ_P0026728 protein_coding protein_coding MGP_LPJ_T0026729.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 92454880 92871826 + MGP_LPJ_P0026729 protein_coding protein_coding MGP_LPJ_T0026730.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 92454922 92870336 + MGP_LPJ_P0026730 protein_coding protein_coding MGP_LPJ_T0026731.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 92455001 92870988 + MGP_LPJ_P0026731 protein_coding protein_coding MGP_LPJ_T0026732.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 92455028 92871788 + MGP_LPJ_P0026732 protein_coding protein_coding MGP_LPJ_T0026733.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 92455046 92871826 + MGP_LPJ_P0026733 protein_coding protein_coding MGP_LPJ_T0026734.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 92455059 92479575 + protein_coding processed_transcript MGP_LPJ_T0026735.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 92455060 92466753 + MGP_LPJ_P0026735 protein_coding protein_coding MGP_LPJ_T0026736.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 92455076 92466900 + MGP_LPJ_P0026736 protein_coding protein_coding MGP_LPJ_T0026737.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 92455111 92871103 + MGP_LPJ_P0026737 protein_coding protein_coding MGP_LPJ_T0026738.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 92455125 92872115 + MGP_LPJ_P0026738 protein_coding protein_coding MGP_LPJ_T0026739.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 92455275 92870343 + MGP_LPJ_P0026739 protein_coding protein_coding MGP_LPJ_T0026740.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 92455302 92869944 + MGP_LPJ_P0026740 protein_coding protein_coding MGP_LPJ_T0026741.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 92725195 92795590 + protein_coding processed_transcript MGP_LPJ_T0026742.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 92726607 92871408 + MGP_LPJ_P0026742 protein_coding protein_coding MGP_LPJ_T0026743.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 92726645 92814321 + protein_coding processed_transcript MGP_LPJ_T0026744.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 92726669 92820824 + protein_coding processed_transcript MGP_LPJ_T0026745.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 92793359 92823214 + MGP_LPJ_P0026745 protein_coding protein_coding MGP_LPJ_T0026746.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 92793370 92871581 + MGP_LPJ_P0026746 protein_coding protein_coding MGP_LPJ_T0026747.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 92793371 92870336 + MGP_LPJ_P0026747 protein_coding protein_coding MGP_LPJ_T0026748.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 92793371 92871581 + MGP_LPJ_P0026748 protein_coding protein_coding MGP_LPJ_T0026749.1 MGP_LPJ_G0017555.1 mouse_genomes_project 10 92793450 92870216 + MGP_LPJ_P0026749 protein_coding protein_coding MGP_LPJ_T0026885.1 MGP_LPJ_G0017597.1 mouse_genomes_project 10 101293309 101410360 + MGP_LPJ_P0026885 Atp2b1 protein_coding unknown_likely_coding MGP_LPJ_T0026886.1 MGP_LPJ_G0017597.1 mouse_genomes_project 10 101293757 101410361 + MGP_LPJ_P0026886 Atp2b1 protein_coding protein_coding MGP_LPJ_T0003039.1 MGP_LPJ_G0002845.1 mouse_genomes_project 10 31932955 31967699 + Gm15939 antisense antisense MGP_LPJ_T0024795.1 MGP_LPJ_G0017026.1 mouse_genomes_project 10 27289468 27346275 + MGP_LPJ_P0024795 Soga3 protein_coding protein_coding MGP_LPJ_T0025476.1 MGP_LPJ_G0017241.1 mouse_genomes_project 10 68657488 68775133 - MGP_LPJ_P0025476 1700040L02Rik protein_coding protein_coding MGP_LPJ_T0025477.1 MGP_LPJ_G0017241.1 mouse_genomes_project 10 68663665 68759026 - MGP_LPJ_P0025477 1700040L02Rik protein_coding protein_coding MGP_LPJ_T0027207.1 MGP_LPJ_G0017709.1 mouse_genomes_project 10 131113915 131142520 + MGP_LPJ_P0027207 protein_coding protein_coding MGP_LPJ_T0027208.1 MGP_LPJ_G0017709.1 mouse_genomes_project 10 131116963 131138933 + MGP_LPJ_P0027208 protein_coding unknown_likely_coding MGP_LPJ_T0027209.1 MGP_LPJ_G0017709.1 mouse_genomes_project 10 131136436 131142520 + MGP_LPJ_P0027209 protein_coding protein_coding MGP_LPJ_T0009603.1 MGP_LPJ_G0007721.1 mouse_genomes_project 10 61538842 61538927 + Mir5108 miRNA miRNA MGP_LPJ_T0011298.1 MGP_LPJ_G0009416.1 mouse_genomes_project 10 94089072 94089180 - Gm27366 misc_RNA misc_RNA MGP_LPJ_T0026876.1 MGP_LPJ_G0017590.1 mouse_genomes_project 10 99786612 99842215 + MGP_LPJ_P0026876 Dcn protein_coding protein_coding MGP_LPJ_T0026877.1 MGP_LPJ_G0017590.1 mouse_genomes_project 10 99789462 99842215 + MGP_LPJ_P0026877 Dcn protein_coding protein_coding MGP_LPJ_T0003105.1 MGP_LPJ_G0002896.1 mouse_genomes_project 10 113783832 113895114 - 1700020G17Rik antisense antisense MGP_LPJ_T0003106.1 MGP_LPJ_G0002896.1 mouse_genomes_project 10 113801407 113895144 - 1700020G17Rik antisense antisense MGP_LPJ_T0003107.1 MGP_LPJ_G0002896.1 mouse_genomes_project 10 113813018 113895176 - 1700020G17Rik antisense antisense MGP_LPJ_T0003108.1 MGP_LPJ_G0002896.1 mouse_genomes_project 10 113840555 113895163 - 1700020G17Rik antisense antisense MGP_LPJ_T0026847.1 MGP_LPJ_G0017577.1 mouse_genomes_project 10 96381504 96386525 - MGP_LPJ_P0026847 protein_coding protein_coding MGP_LPJ_T0026848.1 MGP_LPJ_G0017577.1 mouse_genomes_project 10 96384843 96386429 - protein_coding retained_intron MGP_LPJ_T0027200.1 MGP_LPJ_G0017704.1 mouse_genomes_project 10 126999321 127083406 - MGP_LPJ_P0027200 Usp15 protein_coding protein_coding MGP_LPJ_T0025297.1 MGP_LPJ_G0017194.1 mouse_genomes_project 10 61223824 61225517 - MGP_LPJ_P0025297 D830039M14Rik protein_coding protein_coding MGP_LPJ_T0027522.1 MGP_LPJ_G0017830.1 mouse_genomes_project 10 134032157 134035431 - MGP_LPJ_P0027522 Olfr798 protein_coding protein_coding MGP_LPJ_T0027523.1 MGP_LPJ_G0017830.1 mouse_genomes_project 10 134032157 134033604 - MGP_LPJ_P0027523 Olfr798 protein_coding protein_coding MGP_LPJ_T0025114.1 MGP_LPJ_G0017139.1 mouse_genomes_project 10 51915882 52348711 + MGP_LPJ_P0025114 Slc35f1 protein_coding protein_coding MGP_LPJ_T0026358.1 MGP_LPJ_G0017464.1 mouse_genomes_project 10 82497178 82502858 - MGP_LPJ_P0026358 Gipc3 protein_coding protein_coding MGP_LPJ_T0025161.1 MGP_LPJ_G0017156.1 mouse_genomes_project 10 57706822 57716139 - MGP_LPJ_P0025161 protein_coding protein_coding MGP_LPJ_T0026800.1 MGP_LPJ_G0017566.1 mouse_genomes_project 10 95567813 95586162 - MGP_LPJ_P0026800 Amdhd1 protein_coding protein_coding MGP_LPJ_T0097973.1 MGP_LPJ_G0036254.1 mouse_genomes_project 10 119947559 119949795 + pseudogene pseudogene MGP_LPJ_T0024840.1 MGP_LPJ_G0017048.1 mouse_genomes_project 10 32318617 32341932 - MGP_LPJ_P0024840 Rwdd1 protein_coding protein_coding MGP_LPJ_T0024841.1 MGP_LPJ_G0017048.1 mouse_genomes_project 10 32318623 32323310 - Rwdd1 protein_coding retained_intron MGP_LPJ_T0006147.1 MGP_LPJ_G0005144.1 mouse_genomes_project 10 93077289 93078369 + Gm26765 lincRNA lincRNA MGP_LPJ_T0000862.1 MGP_LPJ_G0000791.1 mouse_genomes_project 10 107846791 107847498 - TEC TEC MGP_LPJ_T0027112.1 MGP_LPJ_G0017680.1 mouse_genomes_project 10 122453830 122464570 - MGP_LPJ_P0027112 Dyrk2 protein_coding protein_coding MGP_LPJ_T0025135.1 MGP_LPJ_G0017147.1 mouse_genomes_project 10 55462091 55472654 + MGP_LPJ_P0025135 Msl3l2 protein_coding protein_coding MGP_LPJ_T0024930.1 MGP_LPJ_G0017080.1 mouse_genomes_project 10 39147745 39189264 + MGP_LPJ_P0024930 Slc22a16 protein_coding protein_coding MGP_LPJ_T0024931.1 MGP_LPJ_G0017080.1 mouse_genomes_project 10 39148022 39189260 + MGP_LPJ_P0024931 Slc22a16 protein_coding protein_coding MGP_LPJ_T0012380.1 MGP_LPJ_G0010471.1 mouse_genomes_project 10 954210 954654 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017063.1 MGP_LPJ_G0015051.1 mouse_genomes_project 10 70576143 70594728 + Mrln processed_transcript lincRNA MGP_LPJ_T0017064.1 MGP_LPJ_G0015051.1 mouse_genomes_project 10 70576146 70599154 + Mrln processed_transcript lincRNA MGP_LPJ_T0017065.1 MGP_LPJ_G0015051.1 mouse_genomes_project 10 70576189 70599023 + Mrln processed_transcript lincRNA MGP_LPJ_T0017066.1 MGP_LPJ_G0015051.1 mouse_genomes_project 10 70576204 70589251 + Mrln processed_transcript lincRNA MGP_LPJ_T0017067.1 MGP_LPJ_G0015051.1 mouse_genomes_project 10 70596339 70599153 + Mrln processed_transcript retained_intron MGP_LPJ_T0025001.1 MGP_LPJ_G0017099.1 mouse_genomes_project 10 40875609 40975626 - MGP_LPJ_P0025001 Foxo3 protein_coding protein_coding MGP_LPJ_T0025002.1 MGP_LPJ_G0017099.1 mouse_genomes_project 10 40879552 40975616 - MGP_LPJ_P0025002 Foxo3 protein_coding protein_coding MGP_LPJ_T0025003.1 MGP_LPJ_G0017099.1 mouse_genomes_project 10 40890096 40975570 - MGP_LPJ_P0025003 Foxo3 protein_coding protein_coding MGP_LPJ_T0025004.1 MGP_LPJ_G0017099.1 mouse_genomes_project 10 40892380 40957316 - MGP_LPJ_P0025004 Foxo3 protein_coding protein_coding MGP_LPJ_T0025005.1 MGP_LPJ_G0017099.1 mouse_genomes_project 10 40946400 40975629 - MGP_LPJ_P0025005 Foxo3 protein_coding protein_coding MGP_LPJ_T0027080.1 MGP_LPJ_G0017670.1 mouse_genomes_project 10 120817461 120850966 - MGP_LPJ_P0027080 Cpsf6 protein_coding protein_coding MGP_LPJ_T0027081.1 MGP_LPJ_G0017670.1 mouse_genomes_project 10 120821827 120850969 - MGP_LPJ_P0027081 Cpsf6 protein_coding protein_coding MGP_LPJ_T0027082.1 MGP_LPJ_G0017670.1 mouse_genomes_project 10 120821830 120850925 - MGP_LPJ_P0027082 Cpsf6 protein_coding protein_coding MGP_LPJ_T0027083.1 MGP_LPJ_G0017670.1 mouse_genomes_project 10 120822162 120834790 - MGP_LPJ_P0027083 Cpsf6 protein_coding nonsense_mediated_decay MGP_LPJ_T0027084.1 MGP_LPJ_G0017670.1 mouse_genomes_project 10 120827644 120850924 - MGP_LPJ_P0027084 Cpsf6 protein_coding protein_coding MGP_LPJ_T0027085.1 MGP_LPJ_G0017670.1 mouse_genomes_project 10 120829365 120829896 - MGP_LPJ_P0027085 Cpsf6 protein_coding protein_coding MGP_LPJ_T0027086.1 MGP_LPJ_G0017670.1 mouse_genomes_project 10 120832731 120837079 - Cpsf6 protein_coding retained_intron MGP_LPJ_T0027087.1 MGP_LPJ_G0017670.1 mouse_genomes_project 10 120840541 120854047 - MGP_LPJ_P0027087 Cpsf6 protein_coding protein_coding MGP_LPJ_T0006128.1 MGP_LPJ_G0005128.1 mouse_genomes_project 10 67040895 67050274 - 1110002J07Rik lincRNA lincRNA MGP_LPJ_T0009619.1 MGP_LPJ_G0007737.1 mouse_genomes_project 10 82239021 82239081 - Mir5615-1 miRNA miRNA MGP_LPJ_T0011807.1 MGP_LPJ_G0009923.1 mouse_genomes_project 10 134120980 134123398 + MGP_LPJ_P0011807 polymorphic_pseudogene polymorphic_pseudogene MGP_LPJ_T0025708.1 MGP_LPJ_G0017280.1 mouse_genomes_project 10 76594178 76596722 + MGP_LPJ_P0025708 Derl3 protein_coding protein_coding MGP_LPJ_T0024937.1 MGP_LPJ_G0017085.1 mouse_genomes_project 10 39675288 39677586 - MGP_LPJ_P0024937 Gpr6 protein_coding protein_coding MGP_LPJ_T0025796.1 MGP_LPJ_G0017307.1 mouse_genomes_project 10 78061389 78194128 - MGP_LPJ_P0025796 Adarb1 protein_coding protein_coding MGP_LPJ_T0025797.1 MGP_LPJ_G0017307.1 mouse_genomes_project 10 78061389 78194123 - MGP_LPJ_P0025797 Adarb1 protein_coding protein_coding MGP_LPJ_T0025798.1 MGP_LPJ_G0017307.1 mouse_genomes_project 10 78061390 78194128 - MGP_LPJ_P0025798 Adarb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0025799.1 MGP_LPJ_G0017307.1 mouse_genomes_project 10 78061390 78194085 - MGP_LPJ_P0025799 Adarb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0025800.1 MGP_LPJ_G0017307.1 mouse_genomes_project 10 78061390 78194085 - MGP_LPJ_P0025800 Adarb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0025801.1 MGP_LPJ_G0017307.1 mouse_genomes_project 10 78061391 78194128 - MGP_LPJ_P0025801 Adarb1 protein_coding protein_coding MGP_LPJ_T0025802.1 MGP_LPJ_G0017307.1 mouse_genomes_project 10 78090872 78194069 - Adarb1 protein_coding retained_intron MGP_LPJ_T0025803.1 MGP_LPJ_G0017307.1 mouse_genomes_project 10 78090886 78194123 - Adarb1 protein_coding retained_intron MGP_LPJ_T0025804.1 MGP_LPJ_G0017307.1 mouse_genomes_project 10 78097372 78194096 - Adarb1 protein_coding retained_intron MGP_LPJ_T0025805.1 MGP_LPJ_G0017307.1 mouse_genomes_project 10 78099919 78193712 - Adarb1 protein_coding retained_intron MGP_LPJ_T0025806.1 MGP_LPJ_G0017307.1 mouse_genomes_project 10 78100110 78194075 - Adarb1 protein_coding retained_intron MGP_LPJ_T0025807.1 MGP_LPJ_G0017307.1 mouse_genomes_project 10 78100296 78114746 - Adarb1 protein_coding retained_intron MGP_LPJ_T0025808.1 MGP_LPJ_G0017307.1 mouse_genomes_project 10 78100371 78144086 - Adarb1 protein_coding retained_intron MGP_LPJ_T0006131.1 MGP_LPJ_G0005131.1 mouse_genomes_project 10 73744476 73877045 - Gm15398 lincRNA lincRNA MGP_LPJ_T0100067.1 MGP_LPJ_G0038330.1 mouse_genomes_project 10 27544008 27544136 + Gm24286 snoRNA snoRNA MGP_LPJ_T0012409.1 MGP_LPJ_G0010500.1 mouse_genomes_project 10 51620687 51621122 - processed_pseudogene processed_pseudogene MGP_LPJ_T0024853.1 MGP_LPJ_G0017057.1 mouse_genomes_project 10 32734489 32741582 + MGP_LPJ_P0024853 Col10a1 protein_coding protein_coding MGP_LPJ_T0006102.1 MGP_LPJ_G0005107.1 mouse_genomes_project 10 19294509 19316577 + Gm5420 lincRNA lincRNA MGP_LPJ_T0006103.1 MGP_LPJ_G0005107.1 mouse_genomes_project 10 19298941 19300568 + Gm5420 lincRNA lincRNA MGP_LPJ_T0012419.1 MGP_LPJ_G0010510.1 mouse_genomes_project 10 72425323 72426128 - processed_pseudogene processed_pseudogene MGP_LPJ_T0025290.1 MGP_LPJ_G0017189.1 mouse_genomes_project 10 60911969 61000056 - MGP_LPJ_P0025290 Adamts14 protein_coding protein_coding MGP_LPJ_T0025291.1 MGP_LPJ_G0017189.1 mouse_genomes_project 10 60913321 60999860 - MGP_LPJ_P0025291 Adamts14 protein_coding protein_coding MGP_LPJ_T0025696.1 MGP_LPJ_G0017275.1 mouse_genomes_project 10 76465716 76472999 - MGP_LPJ_P0025696 Gstt3 protein_coding protein_coding MGP_LPJ_T0025697.1 MGP_LPJ_G0017275.1 mouse_genomes_project 10 76466401 76468862 - Gstt3 protein_coding processed_transcript MGP_LPJ_T0025698.1 MGP_LPJ_G0017275.1 mouse_genomes_project 10 76466521 76472603 - MGP_LPJ_P0025698 Gstt3 protein_coding protein_coding MGP_LPJ_T0025699.1 MGP_LPJ_G0017275.1 mouse_genomes_project 10 76467001 76468466 - MGP_LPJ_P0025699 Gstt3 protein_coding protein_coding MGP_LPJ_T0025700.1 MGP_LPJ_G0017275.1 mouse_genomes_project 10 76468355 76472635 - MGP_LPJ_P0025700 Gstt3 protein_coding nonsense_mediated_decay MGP_LPJ_T0026992.1 MGP_LPJ_G0017634.1 mouse_genomes_project 10 114347826 114350884 + MGP_LPJ_P0026992 Bbs10 protein_coding protein_coding MGP_LPJ_T0024724.1 MGP_LPJ_G0017005.1 mouse_genomes_project 10 22062179 22063226 - MGP_LPJ_P0024724 Taar9 protein_coding protein_coding MGP_LPJ_T0012407.1 MGP_LPJ_G0010498.1 mouse_genomes_project 10 51325435 51325986 - processed_pseudogene processed_pseudogene MGP_LPJ_T0025915.1 MGP_LPJ_G0017341.1 mouse_genomes_project 10 79518576 79526222 - MGP_LPJ_P0025915 Olfr1357 protein_coding protein_coding MGP_LPJ_T0025916.1 MGP_LPJ_G0017341.1 mouse_genomes_project 10 79518576 79519588 - MGP_LPJ_P0025916 Olfr1357 protein_coding protein_coding MGP_LPJ_T0025917.1 MGP_LPJ_G0017341.1 mouse_genomes_project 10 79518840 79526222 - MGP_LPJ_P0025917 Olfr1357 protein_coding protein_coding MGP_LPJ_T0012401.1 MGP_LPJ_G0010492.1 mouse_genomes_project 10 38248728 38249338 - processed_pseudogene processed_pseudogene MGP_LPJ_T0027317.1 MGP_LPJ_G0017740.1 mouse_genomes_project 10 131843250 131861447 + MGP_LPJ_P0027317 Stat6 protein_coding protein_coding MGP_LPJ_T0027318.1 MGP_LPJ_G0017740.1 mouse_genomes_project 10 131843266 131851066 + MGP_LPJ_P0027318 Stat6 protein_coding protein_coding MGP_LPJ_T0027319.1 MGP_LPJ_G0017740.1 mouse_genomes_project 10 131853389 131855576 + Stat6 protein_coding retained_intron MGP_LPJ_T0027320.1 MGP_LPJ_G0017740.1 mouse_genomes_project 10 131857316 131858545 + Stat6 protein_coding retained_intron MGP_LPJ_T0027321.1 MGP_LPJ_G0017740.1 mouse_genomes_project 10 131859889 131860677 + Stat6 protein_coding retained_intron MGP_LPJ_T0025574.1 MGP_LPJ_G0017255.1 mouse_genomes_project 10 71759806 71774266 - MGP_LPJ_P0025574 Cisd1 protein_coding protein_coding MGP_LPJ_T0100063.1 MGP_LPJ_G0038326.1 mouse_genomes_project 10 21691975 21692049 - Snord100 snoRNA snoRNA MGP_LPJ_T0098835.1 MGP_LPJ_G0037098.1 mouse_genomes_project 10 43630546 43630661 + Gm22503 snRNA snRNA MGP_LPJ_T0024928.1 MGP_LPJ_G0017079.1 mouse_genomes_project 10 38898828 39043911 + MGP_LPJ_P0024928 Cdk19 protein_coding protein_coding MGP_LPJ_T0024929.1 MGP_LPJ_G0017079.1 mouse_genomes_project 10 38898828 39043911 + MGP_LPJ_P0024929 Cdk19 protein_coding protein_coding MGP_LPJ_T0025267.1 MGP_LPJ_G0017185.1 mouse_genomes_project 10 60436408 60511732 - MGP_LPJ_P0025267 Unc5b protein_coding protein_coding MGP_LPJ_T0026185.1 MGP_LPJ_G0017413.1 mouse_genomes_project 10 81471595 81480081 - MGP_LPJ_P0026185 Mbd3 protein_coding protein_coding MGP_LPJ_T0026186.1 MGP_LPJ_G0017413.1 mouse_genomes_project 10 81471595 81474234 - MGP_LPJ_P0026186 Mbd3 protein_coding protein_coding MGP_LPJ_T0026187.1 MGP_LPJ_G0017413.1 mouse_genomes_project 10 81471595 81480081 - MGP_LPJ_P0026187 Mbd3 protein_coding protein_coding MGP_LPJ_T0026188.1 MGP_LPJ_G0017413.1 mouse_genomes_project 10 81471895 81479953 - MGP_LPJ_P0026188 Mbd3 protein_coding protein_coding MGP_LPJ_T0026189.1 MGP_LPJ_G0017413.1 mouse_genomes_project 10 81472038 81474783 - MGP_LPJ_P0026189 Mbd3 protein_coding protein_coding MGP_LPJ_T0026190.1 MGP_LPJ_G0017413.1 mouse_genomes_project 10 81472958 81474390 - Mbd3 protein_coding processed_transcript MGP_LPJ_T0026033.1 MGP_LPJ_G0017380.1 mouse_genomes_project 10 80932288 80949385 - MGP_LPJ_P0026033 Med16 protein_coding protein_coding MGP_LPJ_T0026034.1 MGP_LPJ_G0017380.1 mouse_genomes_project 10 80933979 80949362 - MGP_LPJ_P0026034 Med16 protein_coding protein_coding MGP_LPJ_T0026035.1 MGP_LPJ_G0017380.1 mouse_genomes_project 10 80938863 80940313 - Med16 protein_coding retained_intron MGP_LPJ_T0026036.1 MGP_LPJ_G0017380.1 mouse_genomes_project 10 80942465 80949282 - Med16 protein_coding retained_intron MGP_LPJ_T0026037.1 MGP_LPJ_G0017380.1 mouse_genomes_project 10 80943806 80949374 - MGP_LPJ_P0026037 Med16 protein_coding protein_coding MGP_LPJ_T0026038.1 MGP_LPJ_G0017380.1 mouse_genomes_project 10 80943982 80948785 - MGP_LPJ_P0026038 Med16 protein_coding protein_coding MGP_LPJ_T0026039.1 MGP_LPJ_G0017380.1 mouse_genomes_project 10 80944009 80949387 - MGP_LPJ_P0026039 Med16 protein_coding protein_coding MGP_LPJ_T0000856.1 MGP_LPJ_G0000786.1 mouse_genomes_project 10 81603260 81604115 + TEC TEC MGP_LPJ_T0098881.1 MGP_LPJ_G0037144.1 mouse_genomes_project 10 135161797 135161914 - Gm23793 snRNA snRNA MGP_LPJ_T0100108.1 MGP_LPJ_G0038371.1 mouse_genomes_project 10 124333251 124333311 + Gm24298 snoRNA snoRNA MGP_LPJ_T0026485.1 MGP_LPJ_G0017488.1 mouse_genomes_project 10 83697628 83699852 + MGP_LPJ_P0026485 protein_coding protein_coding MGP_LPJ_T0025647.1 MGP_LPJ_G0017262.1 mouse_genomes_project 10 75688420 75812644 + MGP_LPJ_P0025647 Bcr protein_coding protein_coding MGP_LPJ_T0024480.1 MGP_LPJ_G0016925.1 mouse_genomes_project 10 7708290 7723335 - MGP_LPJ_P0024480 Rab32 protein_coding protein_coding MGP_LPJ_T0027333.1 MGP_LPJ_G0017744.1 mouse_genomes_project 10 131926522 131935113 + MGP_LPJ_P0027333 Tac2 protein_coding protein_coding MGP_LPJ_T0027334.1 MGP_LPJ_G0017744.1 mouse_genomes_project 10 131927488 131935113 + MGP_LPJ_P0027334 Tac2 protein_coding protein_coding MGP_LPJ_T0012439.1 MGP_LPJ_G0010530.1 mouse_genomes_project 10 122493678 122494586 + processed_pseudogene processed_pseudogene MGP_LPJ_T0025058.1 MGP_LPJ_G0017117.1 mouse_genomes_project 10 43321154 43344324 - MGP_LPJ_P0025058 Prdm1 protein_coding protein_coding MGP_LPJ_T0025059.1 MGP_LPJ_G0017117.1 mouse_genomes_project 10 43322177 43342786 - MGP_LPJ_P0025059 Prdm1 protein_coding unknown_likely_coding MGP_LPJ_T0025060.1 MGP_LPJ_G0017117.1 mouse_genomes_project 10 43322270 43344263 - MGP_LPJ_P0025060 Prdm1 protein_coding protein_coding MGP_LPJ_T0025061.1 MGP_LPJ_G0017117.1 mouse_genomes_project 10 43331059 43416626 - Prdm1 protein_coding processed_transcript MGP_LPJ_T0026574.1 MGP_LPJ_G0017516.1 mouse_genomes_project 10 87486013 87504278 + MGP_LPJ_P0026574 Pwp1 protein_coding protein_coding MGP_LPJ_T0026575.1 MGP_LPJ_G0017516.1 mouse_genomes_project 10 87486066 87499870 + Pwp1 protein_coding retained_intron MGP_LPJ_T0026576.1 MGP_LPJ_G0017516.1 mouse_genomes_project 10 87486088 87496270 + MGP_LPJ_P0026576 Pwp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0026577.1 MGP_LPJ_G0017516.1 mouse_genomes_project 10 87490436 87499669 + Pwp1 protein_coding retained_intron MGP_LPJ_T0027336.1 MGP_LPJ_G0017746.1 mouse_genomes_project 10 131952128 131956580 - MGP_LPJ_P0027336 Gpr182 protein_coding protein_coding MGP_LPJ_T0026597.1 MGP_LPJ_G0017523.1 mouse_genomes_project 10 87925570 87976062 + MGP_LPJ_P0026597 Timp3 protein_coding protein_coding MGP_LPJ_T0026598.1 MGP_LPJ_G0017523.1 mouse_genomes_project 10 87925752 87931956 + Timp3 protein_coding processed_transcript MGP_LPJ_T0026599.1 MGP_LPJ_G0017523.1 mouse_genomes_project 10 87925754 87953438 + Timp3 protein_coding processed_transcript MGP_LPJ_T0026600.1 MGP_LPJ_G0017523.1 mouse_genomes_project 10 87928046 87970544 + MGP_LPJ_P0026600 Timp3 protein_coding protein_coding MGP_LPJ_T0027076.1 MGP_LPJ_G0017667.1 mouse_genomes_project 10 120648051 120657308 - MGP_LPJ_P0027076 Yeats4 protein_coding protein_coding MGP_LPJ_T0011290.1 MGP_LPJ_G0009408.1 mouse_genomes_project 10 76090497 76090820 + Gm25545 misc_RNA misc_RNA MGP_LPJ_T0098871.1 MGP_LPJ_G0037134.1 mouse_genomes_project 10 112280359 112280465 - Gm23041 snRNA snRNA MGP_LPJ_T0027352.1 MGP_LPJ_G0017755.1 mouse_genomes_project 10 132271758 132286009 - MGP_LPJ_P0027352 Hsd17b6 protein_coding protein_coding MGP_LPJ_T0024562.1 MGP_LPJ_G0016943.1 mouse_genomes_project 10 11716413 11866264 - MGP_LPJ_P0024562 Adgrg6 protein_coding protein_coding MGP_LPJ_T0024563.1 MGP_LPJ_G0016943.1 mouse_genomes_project 10 11721723 11866225 - MGP_LPJ_P0024563 Adgrg6 protein_coding unknown_likely_coding MGP_LPJ_T0024920.1 MGP_LPJ_G0017076.1 mouse_genomes_project 10 38749424 38774400 - MGP_LPJ_P0024920 Rpf2 protein_coding protein_coding MGP_LPJ_T0024921.1 MGP_LPJ_G0017076.1 mouse_genomes_project 10 38749605 38774434 - MGP_LPJ_P0024921 Rpf2 protein_coding protein_coding MGP_LPJ_T0024922.1 MGP_LPJ_G0017076.1 mouse_genomes_project 10 38749861 38753977 - Rpf2 protein_coding processed_transcript MGP_LPJ_T0024923.1 MGP_LPJ_G0017076.1 mouse_genomes_project 10 38749991 38774401 - MGP_LPJ_P0024923 Rpf2 protein_coding protein_coding MGP_LPJ_T0024924.1 MGP_LPJ_G0017076.1 mouse_genomes_project 10 38750066 38774425 - MGP_LPJ_P0024924 Rpf2 protein_coding protein_coding MGP_LPJ_T0024925.1 MGP_LPJ_G0017076.1 mouse_genomes_project 10 38751518 38774391 - MGP_LPJ_P0024925 Rpf2 protein_coding protein_coding MGP_LPJ_T0009621.1 MGP_LPJ_G0007739.1 mouse_genomes_project 10 82429508 82429599 + Mir3057 miRNA miRNA MGP_LPJ_T0098866.1 MGP_LPJ_G0037129.1 mouse_genomes_project 10 106640571 106640680 + Gm25143 snRNA snRNA MGP_LPJ_T0026089.1 MGP_LPJ_G0017395.1 mouse_genomes_project 10 81190962 81202259 - MGP_LPJ_P0026089 Cbarp protein_coding protein_coding MGP_LPJ_T0026090.1 MGP_LPJ_G0017395.1 mouse_genomes_project 10 81190962 81202259 - MGP_LPJ_P0026090 Cbarp protein_coding protein_coding MGP_LPJ_T0026091.1 MGP_LPJ_G0017395.1 mouse_genomes_project 10 81191062 81204149 - MGP_LPJ_P0026091 Cbarp protein_coding nonsense_mediated_decay MGP_LPJ_T0026092.1 MGP_LPJ_G0017395.1 mouse_genomes_project 10 81191062 81204149 - MGP_LPJ_P0026092 Cbarp protein_coding protein_coding MGP_LPJ_T0026093.1 MGP_LPJ_G0017395.1 mouse_genomes_project 10 81193047 81195193 - Cbarp protein_coding retained_intron MGP_LPJ_T0026094.1 MGP_LPJ_G0017395.1 mouse_genomes_project 10 81193585 81196100 - Cbarp protein_coding retained_intron MGP_LPJ_T0026095.1 MGP_LPJ_G0017395.1 mouse_genomes_project 10 81195629 81204147 - MGP_LPJ_P0026095 Cbarp protein_coding nonsense_mediated_decay MGP_LPJ_T0026096.1 MGP_LPJ_G0017395.1 mouse_genomes_project 10 81195669 81203962 - MGP_LPJ_P0026096 Cbarp protein_coding nonsense_mediated_decay MGP_LPJ_T0026097.1 MGP_LPJ_G0017395.1 mouse_genomes_project 10 81196027 81202751 - Cbarp protein_coding processed_transcript MGP_LPJ_T0026098.1 MGP_LPJ_G0017395.1 mouse_genomes_project 10 81201516 81202738 - Cbarp protein_coding processed_transcript MGP_LPJ_T0026099.1 MGP_LPJ_G0017395.1 mouse_genomes_project 10 81201534 81202224 - Cbarp protein_coding processed_transcript MGP_LPJ_T0026100.1 MGP_LPJ_G0017395.1 mouse_genomes_project 10 81201579 81202474 - Cbarp protein_coding retained_intron MGP_LPJ_T0026101.1 MGP_LPJ_G0017395.1 mouse_genomes_project 10 81201745 81202466 - Cbarp protein_coding retained_intron MGP_LPJ_T0026102.1 MGP_LPJ_G0017395.1 mouse_genomes_project 10 81202218 81203400 - Cbarp protein_coding processed_transcript MGP_LPJ_T0025433.1 MGP_LPJ_G0017229.1 mouse_genomes_project 10 63368493 65028402 + MGP_LPJ_P0025433 Ctnna3 protein_coding protein_coding MGP_LPJ_T0025434.1 MGP_LPJ_G0017229.1 mouse_genomes_project 10 63393931 65029104 + MGP_LPJ_P0025434 Ctnna3 protein_coding protein_coding MGP_LPJ_T0025435.1 MGP_LPJ_G0017229.1 mouse_genomes_project 10 63451234 65028270 + MGP_LPJ_P0025435 Ctnna3 protein_coding protein_coding MGP_LPJ_T0025436.1 MGP_LPJ_G0017229.1 mouse_genomes_project 10 63525120 63538864 + Ctnna3 protein_coding processed_transcript MGP_LPJ_T0025437.1 MGP_LPJ_G0017229.1 mouse_genomes_project 10 63774475 64049416 + Ctnna3 protein_coding processed_transcript MGP_LPJ_T0026324.1 MGP_LPJ_G0017456.1 mouse_genomes_project 10 82389432 82410054 + MGP_LPJ_P0026324 Zfr2 protein_coding protein_coding MGP_LPJ_T0026325.1 MGP_LPJ_G0017456.1 mouse_genomes_project 10 82389432 82393831 + MGP_LPJ_P0026325 Zfr2 protein_coding protein_coding MGP_LPJ_T0026326.1 MGP_LPJ_G0017456.1 mouse_genomes_project 10 82389453 82393855 + Zfr2 protein_coding processed_transcript MGP_LPJ_T0026327.1 MGP_LPJ_G0017456.1 mouse_genomes_project 10 82389453 82400348 + Zfr2 protein_coding retained_intron MGP_LPJ_T0026328.1 MGP_LPJ_G0017456.1 mouse_genomes_project 10 82389464 82410052 + Zfr2 protein_coding retained_intron MGP_LPJ_T0026329.1 MGP_LPJ_G0017456.1 mouse_genomes_project 10 82406346 82409643 + MGP_LPJ_P0026329 Zfr2 protein_coding protein_coding MGP_LPJ_T0026330.1 MGP_LPJ_G0017456.1 mouse_genomes_project 10 82406981 82408477 + Zfr2 protein_coding retained_intron MGP_LPJ_T0027028.1 MGP_LPJ_G0017652.1 mouse_genomes_project 10 118746088 118888297 - MGP_LPJ_P0027028 Lgr5 protein_coding protein_coding MGP_LPJ_T0027029.1 MGP_LPJ_G0017652.1 mouse_genomes_project 10 118747791 118888010 - MGP_LPJ_P0027029 Lgr5 protein_coding protein_coding MGP_LPJ_T0027030.1 MGP_LPJ_G0017652.1 mouse_genomes_project 10 118747791 118888010 - MGP_LPJ_P0027030 Lgr5 protein_coding protein_coding MGP_LPJ_T0027031.1 MGP_LPJ_G0017652.1 mouse_genomes_project 10 118752425 118754777 - Lgr5 protein_coding retained_intron MGP_LPJ_T0027032.1 MGP_LPJ_G0017652.1 mouse_genomes_project 10 118753622 118758739 - Lgr5 protein_coding retained_intron MGP_LPJ_T0027033.1 MGP_LPJ_G0017652.1 mouse_genomes_project 10 118758332 118888276 - Lgr5 protein_coding retained_intron MGP_LPJ_T0027034.1 MGP_LPJ_G0017652.1 mouse_genomes_project 10 118769468 118888276 - Lgr5 protein_coding retained_intron MGP_LPJ_T0027035.1 MGP_LPJ_G0017652.1 mouse_genomes_project 10 118820851 118888260 - Lgr5 protein_coding processed_transcript MGP_LPJ_T0017061.1 MGP_LPJ_G0015050.1 mouse_genomes_project 10 61339345 61365111 - Gm28447 processed_transcript antisense MGP_LPJ_T0017062.1 MGP_LPJ_G0015050.1 mouse_genomes_project 10 61345592 61346569 - Gm28447 processed_transcript retained_intron MGP_LPJ_T0026316.1 MGP_LPJ_G0017451.1 mouse_genomes_project 10 82322957 82329867 + MGP_LPJ_P0026316 Eef2 protein_coding protein_coding MGP_LPJ_T0026317.1 MGP_LPJ_G0017451.1 mouse_genomes_project 10 82322971 82329861 + MGP_LPJ_P0026317 Eef2 protein_coding unknown_likely_coding MGP_LPJ_T0027150.1 MGP_LPJ_G0017686.1 mouse_genomes_project 10 123926833 123931698 + MGP_LPJ_P0027150 Llph protein_coding protein_coding MGP_LPJ_T0027151.1 MGP_LPJ_G0017686.1 mouse_genomes_project 10 123926949 123931293 + MGP_LPJ_P0027151 Llph protein_coding protein_coding MGP_LPJ_T0012400.1 MGP_LPJ_G0010491.1 mouse_genomes_project 10 37897510 37897889 - processed_pseudogene processed_pseudogene MGP_LPJ_T0027542.1 MGP_LPJ_G0017842.1 mouse_genomes_project 10 134216364 134217370 - MGP_LPJ_P0027542 Olfr810 protein_coding protein_coding MGP_LPJ_T0027388.1 MGP_LPJ_G0017765.1 mouse_genomes_project 10 132538619 132560320 + Timeless protein_coding retained_intron MGP_LPJ_T0027389.1 MGP_LPJ_G0017765.1 mouse_genomes_project 10 132538628 132560240 + MGP_LPJ_P0027389 Timeless protein_coding protein_coding MGP_LPJ_T0027390.1 MGP_LPJ_G0017765.1 mouse_genomes_project 10 132538630 132553495 + MGP_LPJ_P0027390 Timeless protein_coding protein_coding MGP_LPJ_T0027391.1 MGP_LPJ_G0017765.1 mouse_genomes_project 10 132538669 132549061 + MGP_LPJ_P0027391 Timeless protein_coding protein_coding MGP_LPJ_T0027392.1 MGP_LPJ_G0017765.1 mouse_genomes_project 10 132538688 132560329 + MGP_LPJ_P0027392 Timeless protein_coding protein_coding MGP_LPJ_T0027393.1 MGP_LPJ_G0017765.1 mouse_genomes_project 10 132547286 132560096 + MGP_LPJ_P0027393 Timeless protein_coding unknown_likely_coding MGP_LPJ_T0027394.1 MGP_LPJ_G0017765.1 mouse_genomes_project 10 132547786 132549001 + Timeless protein_coding retained_intron MGP_LPJ_T0027395.1 MGP_LPJ_G0017765.1 mouse_genomes_project 10 132549724 132550396 + Timeless protein_coding retained_intron MGP_LPJ_T0027396.1 MGP_LPJ_G0017765.1 mouse_genomes_project 10 132549793 132551314 + Timeless protein_coding processed_transcript MGP_LPJ_T0027397.1 MGP_LPJ_G0017765.1 mouse_genomes_project 10 132550014 132551081 + Timeless protein_coding retained_intron MGP_LPJ_T0027398.1 MGP_LPJ_G0017765.1 mouse_genomes_project 10 132554670 132555438 + Timeless protein_coding retained_intron MGP_LPJ_T0027399.1 MGP_LPJ_G0017765.1 mouse_genomes_project 10 132554725 132560327 + Timeless protein_coding processed_transcript MGP_LPJ_T0027400.1 MGP_LPJ_G0017765.1 mouse_genomes_project 10 132556595 132557243 + Timeless protein_coding retained_intron MGP_LPJ_T0027401.1 MGP_LPJ_G0017765.1 mouse_genomes_project 10 132557001 132557755 + Timeless protein_coding retained_intron MGP_LPJ_T0025921.1 MGP_LPJ_G0017345.1 mouse_genomes_project 10 79765969 79766932 - MGP_LPJ_P0025921 Olfr1356 protein_coding protein_coding MGP_LPJ_T0025922.1 MGP_LPJ_G0017345.1 mouse_genomes_project 10 79765969 79771185 - MGP_LPJ_P0025922 Olfr1356 protein_coding protein_coding MGP_LPJ_T0098849.1 MGP_LPJ_G0037112.1 mouse_genomes_project 10 67388719 67388820 - Gm26359 snRNA snRNA MGP_LPJ_T0026891.1 MGP_LPJ_G0017600.1 mouse_genomes_project 10 101510129 101511251 - MGP_LPJ_P0026891 Phxr2 protein_coding protein_coding MGP_LPJ_T0012412.1 MGP_LPJ_G0010503.1 mouse_genomes_project 10 59259986 59260235 + processed_pseudogene processed_pseudogene MGP_LPJ_T0027014.1 MGP_LPJ_G0017644.1 mouse_genomes_project 10 116120238 116122893 + MGP_LPJ_P0027014 Gm26596 protein_coding protein_coding MGP_LPJ_T0027140.1 MGP_LPJ_G0017685.1 mouse_genomes_project 10 123897332 123898949 + Tmbim4 protein_coding processed_transcript MGP_LPJ_T0027141.1 MGP_LPJ_G0017685.1 mouse_genomes_project 10 123897354 123898942 + Tmbim4 protein_coding processed_transcript MGP_LPJ_T0027142.1 MGP_LPJ_G0017685.1 mouse_genomes_project 10 123897400 123915970 + MGP_LPJ_P0027142 Tmbim4 protein_coding protein_coding MGP_LPJ_T0027143.1 MGP_LPJ_G0017685.1 mouse_genomes_project 10 123898393 123898942 + Tmbim4 protein_coding processed_transcript MGP_LPJ_T0027144.1 MGP_LPJ_G0017685.1 mouse_genomes_project 10 123905682 123924709 + MGP_LPJ_P0027144 Tmbim4 protein_coding protein_coding MGP_LPJ_T0027145.1 MGP_LPJ_G0017685.1 mouse_genomes_project 10 123905712 123916125 + MGP_LPJ_P0027145 Tmbim4 protein_coding protein_coding MGP_LPJ_T0027146.1 MGP_LPJ_G0017685.1 mouse_genomes_project 10 123905725 123924631 + MGP_LPJ_P0027146 Tmbim4 protein_coding nonsense_mediated_decay MGP_LPJ_T0027147.1 MGP_LPJ_G0017685.1 mouse_genomes_project 10 123919785 123924531 + Tmbim4 protein_coding retained_intron MGP_LPJ_T0027148.1 MGP_LPJ_G0017685.1 mouse_genomes_project 10 123921230 123924064 + Tmbim4 protein_coding retained_intron MGP_LPJ_T0027149.1 MGP_LPJ_G0017685.1 mouse_genomes_project 10 123921230 123924709 + Tmbim4 protein_coding retained_intron MGP_LPJ_T0024342.1 MGP_LPJ_G0016896.1 mouse_genomes_project 10 1475289 1556539 + MGP_LPJ_P0024342 Ccdc170 protein_coding protein_coding MGP_LPJ_T0024343.1 MGP_LPJ_G0016896.1 mouse_genomes_project 10 1499184 1556539 + MGP_LPJ_P0024343 Ccdc170 protein_coding protein_coding MGP_LPJ_T0024344.1 MGP_LPJ_G0016896.1 mouse_genomes_project 10 1500845 1506936 + MGP_LPJ_P0024344 Ccdc170 protein_coding protein_coding MGP_LPJ_T0024345.1 MGP_LPJ_G0016896.1 mouse_genomes_project 10 1528873 1537594 + Ccdc170 protein_coding processed_transcript MGP_LPJ_T0024414.1 MGP_LPJ_G0016909.1 mouse_genomes_project 10 4504835 4532680 - MGP_LPJ_P0024414 protein_coding protein_coding MGP_LPJ_T0024459.1 MGP_LPJ_G0016920.1 mouse_genomes_project 10 5804573 5970451 - MGP_LPJ_P0024459 Sash1 protein_coding protein_coding MGP_LPJ_T0024460.1 MGP_LPJ_G0016920.1 mouse_genomes_project 10 5806825 5970239 - MGP_LPJ_P0024460 Sash1 protein_coding unknown_likely_coding MGP_LPJ_T0026159.1 MGP_LPJ_G0017407.1 mouse_genomes_project 10 81389431 81391713 - MGP_LPJ_P0026159 2310011J03Rik protein_coding protein_coding MGP_LPJ_T0027458.1 MGP_LPJ_G0017788.1 mouse_genomes_project 10 133027278 133031310 - MGP_LPJ_P0027458 Suox protein_coding protein_coding MGP_LPJ_T0098107.1 MGP_LPJ_G0036388.1 mouse_genomes_project 10 79193018 79193137 + n-R5s77 rRNA rRNA MGP_LPJ_T0025941.1 MGP_LPJ_G0017357.1 mouse_genomes_project 10 80545872 80560598 - MGP_LPJ_P0025941 Mier2 protein_coding protein_coding MGP_LPJ_T0025942.1 MGP_LPJ_G0017357.1 mouse_genomes_project 10 80545872 80560706 - MGP_LPJ_P0025942 Mier2 protein_coding protein_coding MGP_LPJ_T0025943.1 MGP_LPJ_G0017357.1 mouse_genomes_project 10 80545873 80547588 - MGP_LPJ_P0025943 Mier2 protein_coding protein_coding MGP_LPJ_T0025944.1 MGP_LPJ_G0017357.1 mouse_genomes_project 10 80546548 80547793 - Mier2 protein_coding retained_intron MGP_LPJ_T0025945.1 MGP_LPJ_G0017357.1 mouse_genomes_project 10 80547295 80550398 - Mier2 protein_coding retained_intron MGP_LPJ_T0025946.1 MGP_LPJ_G0017357.1 mouse_genomes_project 10 80548094 80549980 - Mier2 protein_coding processed_transcript MGP_LPJ_T0025947.1 MGP_LPJ_G0017357.1 mouse_genomes_project 10 80554429 80560621 - MGP_LPJ_P0025947 Mier2 protein_coding nonsense_mediated_decay MGP_LPJ_T0025948.1 MGP_LPJ_G0017357.1 mouse_genomes_project 10 80554501 80560391 - MGP_LPJ_P0025948 Mier2 protein_coding protein_coding MGP_LPJ_T0025949.1 MGP_LPJ_G0017357.1 mouse_genomes_project 10 80554508 80560628 - MGP_LPJ_P0025949 Mier2 protein_coding protein_coding MGP_LPJ_T0025950.1 MGP_LPJ_G0017357.1 mouse_genomes_project 10 80554533 80556437 - MGP_LPJ_P0025950 Mier2 protein_coding protein_coding MGP_LPJ_T0025951.1 MGP_LPJ_G0017357.1 mouse_genomes_project 10 80555185 80560584 - MGP_LPJ_P0025951 Mier2 protein_coding protein_coding MGP_LPJ_T0025952.1 MGP_LPJ_G0017357.1 mouse_genomes_project 10 80555263 80560112 - MGP_LPJ_P0025952 Mier2 protein_coding protein_coding MGP_LPJ_T0026648.1 MGP_LPJ_G0017538.1 mouse_genomes_project 10 89943380 89992729 + MGP_LPJ_P0026648 Ccdc53 protein_coding protein_coding MGP_LPJ_T0026649.1 MGP_LPJ_G0017538.1 mouse_genomes_project 10 89943433 89960051 + MGP_LPJ_P0026649 Ccdc53 protein_coding nonsense_mediated_decay MGP_LPJ_T0026650.1 MGP_LPJ_G0017538.1 mouse_genomes_project 10 89943439 89992577 + MGP_LPJ_P0026650 Ccdc53 protein_coding protein_coding MGP_LPJ_T0026651.1 MGP_LPJ_G0017538.1 mouse_genomes_project 10 89943458 89970319 + MGP_LPJ_P0026651 Ccdc53 protein_coding protein_coding MGP_LPJ_T0026652.1 MGP_LPJ_G0017538.1 mouse_genomes_project 10 89943471 89959754 + Ccdc53 protein_coding retained_intron MGP_LPJ_T0026653.1 MGP_LPJ_G0017538.1 mouse_genomes_project 10 89943550 89970098 + MGP_LPJ_P0026653 Ccdc53 protein_coding protein_coding MGP_LPJ_T0026654.1 MGP_LPJ_G0017538.1 mouse_genomes_project 10 89946833 89980454 + Ccdc53 protein_coding processed_transcript MGP_LPJ_T0026655.1 MGP_LPJ_G0017538.1 mouse_genomes_project 10 89981096 89992578 + Ccdc53 protein_coding processed_transcript MGP_LPJ_T0025886.1 MGP_LPJ_G0017329.1 mouse_genomes_project 10 78903731 78907684 + Dnmt3l protein_coding processed_transcript MGP_LPJ_T0025887.1 MGP_LPJ_G0017329.1 mouse_genomes_project 10 78904071 78930803 + MGP_LPJ_P0025887 Dnmt3l protein_coding protein_coding MGP_LPJ_T0025888.1 MGP_LPJ_G0017329.1 mouse_genomes_project 10 78914689 78930803 + MGP_LPJ_P0025888 Dnmt3l protein_coding protein_coding MGP_LPJ_T0025889.1 MGP_LPJ_G0017329.1 mouse_genomes_project 10 78914806 78930797 + MGP_LPJ_P0025889 Dnmt3l protein_coding protein_coding MGP_LPJ_T0025890.1 MGP_LPJ_G0017329.1 mouse_genomes_project 10 78919682 78924196 + Dnmt3l protein_coding retained_intron MGP_LPJ_T0025891.1 MGP_LPJ_G0017329.1 mouse_genomes_project 10 78920182 78930796 + MGP_LPJ_P0025891 Dnmt3l protein_coding protein_coding MGP_LPJ_T0025892.1 MGP_LPJ_G0017329.1 mouse_genomes_project 10 78920182 78930796 + MGP_LPJ_P0025892 Dnmt3l protein_coding protein_coding MGP_LPJ_T0025893.1 MGP_LPJ_G0017329.1 mouse_genomes_project 10 78920182 78930796 + MGP_LPJ_P0025893 Dnmt3l protein_coding protein_coding MGP_LPJ_T0026564.1 MGP_LPJ_G0017513.1 mouse_genomes_project 10 86864770 86866836 + MGP_LPJ_P0026564 Gm8394 protein_coding protein_coding MGP_LPJ_T0024503.1 MGP_LPJ_G0016933.1 mouse_genomes_project 10 10250037 10253874 + MGP_LPJ_P0024503 Sf3b5 protein_coding protein_coding MGP_LPJ_T0011302.1 MGP_LPJ_G0009420.1 mouse_genomes_project 10 111997068 111997346 - Gm22097 misc_RNA misc_RNA MGP_LPJ_T0024829.1 MGP_LPJ_G0017041.1 mouse_genomes_project 10 31357464 31775267 + MGP_LPJ_P0024829 Trdn protein_coding protein_coding MGP_LPJ_T0024830.1 MGP_LPJ_G0017041.1 mouse_genomes_project 10 31357705 31773076 + MGP_LPJ_P0024830 Trdn protein_coding unknown_likely_coding MGP_LPJ_T0025475.1 MGP_LPJ_G0017240.1 mouse_genomes_project 10 68309590 68500117 - MGP_LPJ_P0025475 Arid5b protein_coding protein_coding MGP_LPJ_T0100055.1 MGP_LPJ_G0038318.1 mouse_genomes_project 10 8499683 8499821 - Gm25979 snoRNA snoRNA MGP_LPJ_T0012408.1 MGP_LPJ_G0010499.1 mouse_genomes_project 10 51398442 51399002 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006087.1 MGP_LPJ_G0005096.1 mouse_genomes_project 10 281896 284945 - Gm26752 lincRNA lincRNA MGP_LPJ_T0025966.1 MGP_LPJ_G0017365.1 mouse_genomes_project 10 80709937 80717058 + MGP_LPJ_P0025966 Gzmm protein_coding protein_coding MGP_LPJ_T0025967.1 MGP_LPJ_G0017365.1 mouse_genomes_project 10 80715554 80717057 + Gzmm protein_coding processed_transcript MGP_LPJ_T0098879.1 MGP_LPJ_G0037142.1 mouse_genomes_project 10 132618719 132618825 - Gm23241 snRNA snRNA MGP_LPJ_T0026134.1 MGP_LPJ_G0017402.1 mouse_genomes_project 10 81319099 81326772 + MGP_LPJ_P0026134 Ndufs7 protein_coding protein_coding MGP_LPJ_T0026135.1 MGP_LPJ_G0017402.1 mouse_genomes_project 10 81319427 81323392 + Ndufs7 protein_coding retained_intron MGP_LPJ_T0026136.1 MGP_LPJ_G0017402.1 mouse_genomes_project 10 81319430 81326771 + MGP_LPJ_P0026136 Ndufs7 protein_coding protein_coding MGP_LPJ_T0026137.1 MGP_LPJ_G0017402.1 mouse_genomes_project 10 81319438 81323920 + Ndufs7 protein_coding retained_intron MGP_LPJ_T0026138.1 MGP_LPJ_G0017402.1 mouse_genomes_project 10 81319463 81326773 + Ndufs7 protein_coding processed_transcript MGP_LPJ_T0026139.1 MGP_LPJ_G0017402.1 mouse_genomes_project 10 81323293 81325119 + Ndufs7 protein_coding retained_intron MGP_LPJ_T0027535.1 MGP_LPJ_G0017837.1 mouse_genomes_project 10 134120980 134123398 + MGP_LPJ_P0027535 Olfr804 protein_coding protein_coding MGP_LPJ_T0024593.1 MGP_LPJ_G0016952.1 mouse_genomes_project 10 15621192 15706685 - MGP_LPJ_P0024593 Ect2l protein_coding protein_coding MGP_LPJ_T0024594.1 MGP_LPJ_G0016952.1 mouse_genomes_project 10 15621192 15666383 - MGP_LPJ_P0024594 Ect2l protein_coding unknown_likely_coding MGP_LPJ_T0017070.1 MGP_LPJ_G0015054.1 mouse_genomes_project 10 108304976 108313061 + Gm15663 processed_transcript antisense MGP_LPJ_T0017071.1 MGP_LPJ_G0015054.1 mouse_genomes_project 10 108305582 108314895 + Gm15663 processed_transcript lincRNA MGP_LPJ_T0012417.1 MGP_LPJ_G0010508.1 mouse_genomes_project 10 62789111 62789737 + processed_pseudogene processed_pseudogene MGP_LPJ_T0025582.1 MGP_LPJ_G0017257.1 mouse_genomes_project 10 73170296 73190362 + MGP_LPJ_P0025582 Zwint protein_coding protein_coding MGP_LPJ_T0025583.1 MGP_LPJ_G0017257.1 mouse_genomes_project 10 73170346 73185191 + MGP_LPJ_P0025583 Zwint protein_coding protein_coding MGP_LPJ_T0025584.1 MGP_LPJ_G0017257.1 mouse_genomes_project 10 73170347 73184567 + MGP_LPJ_P0025584 Zwint protein_coding protein_coding MGP_LPJ_T0025585.1 MGP_LPJ_G0017257.1 mouse_genomes_project 10 73170894 73172050 + Zwint protein_coding retained_intron MGP_LPJ_T0025586.1 MGP_LPJ_G0017257.1 mouse_genomes_project 10 73171688 73172840 + Zwint protein_coding retained_intron MGP_LPJ_T0025587.1 MGP_LPJ_G0017257.1 mouse_genomes_project 10 73172042 73189722 + Zwint protein_coding processed_transcript MGP_LPJ_T0100075.1 MGP_LPJ_G0038338.1 mouse_genomes_project 10 39848294 39848426 + Gm25526 snoRNA snoRNA MGP_LPJ_T0024612.1 MGP_LPJ_G0016959.1 mouse_genomes_project 10 16525047 16539544 - MGP_LPJ_P0024612 Tnfaip3 protein_coding protein_coding MGP_LPJ_T0024613.1 MGP_LPJ_G0016959.1 mouse_genomes_project 10 16525050 16536100 - MGP_LPJ_P0024613 Tnfaip3 protein_coding protein_coding MGP_LPJ_T0024614.1 MGP_LPJ_G0016959.1 mouse_genomes_project 10 16525066 16539510 - Tnfaip3 protein_coding retained_intron MGP_LPJ_T0024615.1 MGP_LPJ_G0016959.1 mouse_genomes_project 10 16531404 16532979 - Tnfaip3 protein_coding retained_intron MGP_LPJ_T0024616.1 MGP_LPJ_G0016959.1 mouse_genomes_project 10 16532399 16539791 - MGP_LPJ_P0024616 Tnfaip3 protein_coding protein_coding MGP_LPJ_T0024617.1 MGP_LPJ_G0016959.1 mouse_genomes_project 10 16535652 16538711 - MGP_LPJ_P0024617 Tnfaip3 protein_coding protein_coding MGP_LPJ_T0025313.1 MGP_LPJ_G0017201.1 mouse_genomes_project 10 61499732 61551522 - MGP_LPJ_P0025313 H2afy2 protein_coding protein_coding MGP_LPJ_T0025837.1 MGP_LPJ_G0017314.1 mouse_genomes_project 10 78512681 78513014 + MGP_LPJ_P0025837 Gm10272 protein_coding protein_coding MGP_LPJ_T0017039.1 MGP_LPJ_G0015046.1 mouse_genomes_project 10 22514283 22515182 - Gm15270 processed_transcript processed_transcript MGP_LPJ_T0017040.1 MGP_LPJ_G0015046.1 mouse_genomes_project 10 22514289 22565935 - Gm15270 processed_transcript processed_transcript MGP_LPJ_T0017041.1 MGP_LPJ_G0015046.1 mouse_genomes_project 10 22549376 22563851 - Gm15270 processed_transcript processed_transcript MGP_LPJ_T0017042.1 MGP_LPJ_G0015046.1 mouse_genomes_project 10 22565364 22567228 - Gm15270 processed_transcript processed_transcript MGP_LPJ_T0006169.1 MGP_LPJ_G0005152.1 mouse_genomes_project 10 101719343 101845012 + B530045E10Rik lincRNA lincRNA MGP_LPJ_T0006170.1 MGP_LPJ_G0005152.1 mouse_genomes_project 10 101842487 101845012 + B530045E10Rik lincRNA lincRNA MGP_LPJ_T0100095.1 MGP_LPJ_G0038358.1 mouse_genomes_project 10 98129434 98129567 + Gm24433 snoRNA snoRNA MGP_LPJ_T0012392.1 MGP_LPJ_G0010483.1 mouse_genomes_project 10 21978782 21979397 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009642.1 MGP_LPJ_G0007760.1 mouse_genomes_project 10 119895904 119895999 - Gm25190 miRNA miRNA MGP_LPJ_T0101247.1 MGP_LPJ_G0039494.1 mouse_genomes_project 10 121080952 121082482 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0101248.1 MGP_LPJ_G0039494.1 mouse_genomes_project 10 121081325 121081888 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0027469.1 MGP_LPJ_G0017796.1 mouse_genomes_project 10 133173277 133185138 + MGP_LPJ_P0027469 Dnajc14 protein_coding unknown_likely_coding MGP_LPJ_T0027037.1 MGP_LPJ_G0017654.1 mouse_genomes_project 10 119128273 119163418 + MGP_LPJ_P0027037 Tspan8 protein_coding protein_coding MGP_LPJ_T0027038.1 MGP_LPJ_G0017654.1 mouse_genomes_project 10 119128273 119163418 + MGP_LPJ_P0027038 Tspan8 protein_coding protein_coding MGP_LPJ_T0027039.1 MGP_LPJ_G0017654.1 mouse_genomes_project 10 119128273 119163418 + MGP_LPJ_P0027039 Tspan8 protein_coding protein_coding MGP_LPJ_T0101755.1 MGP_LPJ_G0039793.1 mouse_genomes_project 10 134414221 134415340 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0100054.1 MGP_LPJ_G0038317.1 mouse_genomes_project 10 7815310 7815441 + Gm23601 snoRNA snoRNA MGP_LPJ_T0025299.1 MGP_LPJ_G0017196.1 mouse_genomes_project 10 61349695 61382602 + MGP_LPJ_P0025299 Npffr1 protein_coding protein_coding MGP_LPJ_T0025157.1 MGP_LPJ_G0017154.1 mouse_genomes_project 10 57273750 57282679 + MGP_LPJ_P0025157 Smpdl3a protein_coding protein_coding MGP_LPJ_T0025158.1 MGP_LPJ_G0017154.1 mouse_genomes_project 10 57273789 57293099 + MGP_LPJ_P0025158 Smpdl3a protein_coding protein_coding MGP_LPJ_T0025159.1 MGP_LPJ_G0017154.1 mouse_genomes_project 10 57273983 57287569 + Smpdl3a protein_coding processed_transcript MGP_LPJ_T0003102.1 MGP_LPJ_G0002893.1 mouse_genomes_project 10 95725054 95735034 - Gm15915 antisense antisense MGP_LPJ_T0027279.1 MGP_LPJ_G0017734.1 mouse_genomes_project 10 131556507 131629957 + MGP_LPJ_P0027279 R3hdm2 protein_coding protein_coding MGP_LPJ_T0027280.1 MGP_LPJ_G0017734.1 mouse_genomes_project 10 131573217 131689979 + MGP_LPJ_P0027280 R3hdm2 protein_coding protein_coding MGP_LPJ_T0027281.1 MGP_LPJ_G0017734.1 mouse_genomes_project 10 131573236 131690002 + MGP_LPJ_P0027281 R3hdm2 protein_coding protein_coding MGP_LPJ_T0027282.1 MGP_LPJ_G0017734.1 mouse_genomes_project 10 131573236 131690002 + MGP_LPJ_P0027282 R3hdm2 protein_coding protein_coding MGP_LPJ_T0027283.1 MGP_LPJ_G0017734.1 mouse_genomes_project 10 131605127 131638816 + MGP_LPJ_P0027283 R3hdm2 protein_coding protein_coding MGP_LPJ_T0027284.1 MGP_LPJ_G0017734.1 mouse_genomes_project 10 131605656 131689968 + MGP_LPJ_P0027284 R3hdm2 protein_coding protein_coding MGP_LPJ_T0027285.1 MGP_LPJ_G0017734.1 mouse_genomes_project 10 131605913 131689650 + MGP_LPJ_P0027285 R3hdm2 protein_coding protein_coding MGP_LPJ_T0027286.1 MGP_LPJ_G0017734.1 mouse_genomes_project 10 131606021 131639581 + MGP_LPJ_P0027286 R3hdm2 protein_coding protein_coding MGP_LPJ_T0027287.1 MGP_LPJ_G0017734.1 mouse_genomes_project 10 131629876 131690003 + MGP_LPJ_P0027287 R3hdm2 protein_coding protein_coding MGP_LPJ_T0027288.1 MGP_LPJ_G0017734.1 mouse_genomes_project 10 131629876 131689328 + MGP_LPJ_P0027288 R3hdm2 protein_coding protein_coding MGP_LPJ_T0027289.1 MGP_LPJ_G0017734.1 mouse_genomes_project 10 131629876 131689986 + MGP_LPJ_P0027289 R3hdm2 protein_coding protein_coding MGP_LPJ_T0027290.1 MGP_LPJ_G0017734.1 mouse_genomes_project 10 131629876 131689328 + MGP_LPJ_P0027290 R3hdm2 protein_coding nonsense_mediated_decay MGP_LPJ_T0027291.1 MGP_LPJ_G0017734.1 mouse_genomes_project 10 131646439 131652156 + MGP_LPJ_P0027291 R3hdm2 protein_coding protein_coding MGP_LPJ_T0027292.1 MGP_LPJ_G0017734.1 mouse_genomes_project 10 131646465 131652286 + R3hdm2 protein_coding retained_intron MGP_LPJ_T0027293.1 MGP_LPJ_G0017734.1 mouse_genomes_project 10 131646469 131690002 + MGP_LPJ_P0027293 R3hdm2 protein_coding protein_coding MGP_LPJ_T0027294.1 MGP_LPJ_G0017734.1 mouse_genomes_project 10 131646509 131673890 + R3hdm2 protein_coding processed_transcript MGP_LPJ_T0027295.1 MGP_LPJ_G0017734.1 mouse_genomes_project 10 131671050 131674281 + R3hdm2 protein_coding retained_intron MGP_LPJ_T0027296.1 MGP_LPJ_G0017734.1 mouse_genomes_project 10 131675027 131683343 + R3hdm2 protein_coding retained_intron MGP_LPJ_T0027297.1 MGP_LPJ_G0017734.1 mouse_genomes_project 10 131675218 131685762 + MGP_LPJ_P0027297 R3hdm2 protein_coding protein_coding MGP_LPJ_T0027298.1 MGP_LPJ_G0017734.1 mouse_genomes_project 10 131683275 131689986 + MGP_LPJ_P0027298 R3hdm2 protein_coding protein_coding MGP_LPJ_T0024807.1 MGP_LPJ_G0017031.1 mouse_genomes_project 10 28379035 28383545 - MGP_LPJ_P0024807 Cenpw protein_coding protein_coding MGP_LPJ_T0011303.1 MGP_LPJ_G0009421.1 mouse_genomes_project 10 118175121 118175446 - Gm25319 misc_RNA misc_RNA MGP_LPJ_T0026763.1 MGP_LPJ_G0017558.1 mouse_genomes_project 10 93039261 93046747 - MGP_LPJ_P0026763 Slc25a3 protein_coding protein_coding MGP_LPJ_T0026764.1 MGP_LPJ_G0017558.1 mouse_genomes_project 10 93039478 93046645 - MGP_LPJ_P0026764 Slc25a3 protein_coding nonsense_mediated_decay MGP_LPJ_T0026765.1 MGP_LPJ_G0017558.1 mouse_genomes_project 10 93039479 93046691 - MGP_LPJ_P0026765 Slc25a3 protein_coding protein_coding MGP_LPJ_T0026766.1 MGP_LPJ_G0017558.1 mouse_genomes_project 10 93039495 93046643 - MGP_LPJ_P0026766 Slc25a3 protein_coding protein_coding MGP_LPJ_T0026767.1 MGP_LPJ_G0017558.1 mouse_genomes_project 10 93039698 93042525 - Slc25a3 protein_coding retained_intron MGP_LPJ_T0026768.1 MGP_LPJ_G0017558.1 mouse_genomes_project 10 93040860 93043413 - Slc25a3 protein_coding processed_transcript MGP_LPJ_T0026769.1 MGP_LPJ_G0017558.1 mouse_genomes_project 10 93040886 93044911 - Slc25a3 protein_coding retained_intron MGP_LPJ_T0026770.1 MGP_LPJ_G0017558.1 mouse_genomes_project 10 93042462 93046710 - Slc25a3 protein_coding retained_intron MGP_LPJ_T0009649.1 MGP_LPJ_G0007767.1 mouse_genomes_project 10 130105344 130105417 + Gm22183 miRNA miRNA MGP_LPJ_T0006122.1 MGP_LPJ_G0005126.1 mouse_genomes_project 10 66175739 66179200 - 1700023F02Rik lincRNA lincRNA MGP_LPJ_T0006123.1 MGP_LPJ_G0005126.1 mouse_genomes_project 10 66175739 66324476 - 1700023F02Rik lincRNA lincRNA MGP_LPJ_T0006124.1 MGP_LPJ_G0005126.1 mouse_genomes_project 10 66175743 66179214 - 1700023F02Rik lincRNA lincRNA MGP_LPJ_T0006125.1 MGP_LPJ_G0005126.1 mouse_genomes_project 10 66175743 66179221 - 1700023F02Rik lincRNA lincRNA MGP_LPJ_T0006126.1 MGP_LPJ_G0005126.1 mouse_genomes_project 10 66175810 66178205 - 1700023F02Rik lincRNA lincRNA MGP_LPJ_T0025334.1 MGP_LPJ_G0017206.1 mouse_genomes_project 10 62056117 62071121 + MGP_LPJ_P0025334 Tacr2 protein_coding protein_coding MGP_LPJ_T0100101.1 MGP_LPJ_G0038364.1 mouse_genomes_project 10 109929019 109929104 + Gm24745 snoRNA snoRNA MGP_LPJ_T0003076.1 MGP_LPJ_G0002874.1 mouse_genomes_project 10 81448458 81448993 + Gm15123 antisense antisense MGP_LPJ_T0027450.1 MGP_LPJ_G0017787.1 mouse_genomes_project 10 132987541 133003128 - MGP_LPJ_P0027450 Ikzf4 protein_coding protein_coding MGP_LPJ_T0027451.1 MGP_LPJ_G0017787.1 mouse_genomes_project 10 132989145 133002963 - MGP_LPJ_P0027451 Ikzf4 protein_coding protein_coding MGP_LPJ_T0027452.1 MGP_LPJ_G0017787.1 mouse_genomes_project 10 132989198 133002981 - MGP_LPJ_P0027452 Ikzf4 protein_coding nonsense_mediated_decay MGP_LPJ_T0027453.1 MGP_LPJ_G0017787.1 mouse_genomes_project 10 132990443 133001397 - MGP_LPJ_P0027453 Ikzf4 protein_coding protein_coding MGP_LPJ_T0027454.1 MGP_LPJ_G0017787.1 mouse_genomes_project 10 132996978 133002933 - MGP_LPJ_P0027454 Ikzf4 protein_coding nonsense_mediated_decay MGP_LPJ_T0027455.1 MGP_LPJ_G0017787.1 mouse_genomes_project 10 132997894 133002927 - MGP_LPJ_P0027455 Ikzf4 protein_coding nonsense_mediated_decay MGP_LPJ_T0027456.1 MGP_LPJ_G0017787.1 mouse_genomes_project 10 132997920 133002944 - MGP_LPJ_P0027456 Ikzf4 protein_coding nonsense_mediated_decay MGP_LPJ_T0027457.1 MGP_LPJ_G0017787.1 mouse_genomes_project 10 133001186 133002963 - Ikzf4 protein_coding processed_transcript MGP_LPJ_T0025160.1 MGP_LPJ_G0017155.1 mouse_genomes_project 10 57701618 57719022 - MGP_LPJ_P0025160 protein_coding protein_coding MGP_LPJ_T0100061.1 MGP_LPJ_G0038324.1 mouse_genomes_project 10 19493087 19493196 - Gm23839 snoRNA snoRNA MGP_LPJ_T0024769.1 MGP_LPJ_G0017020.1 mouse_genomes_project 10 24833024 24945680 + MGP_LPJ_P0024769 Arhgap18 protein_coding protein_coding MGP_LPJ_T0024770.1 MGP_LPJ_G0017020.1 mouse_genomes_project 10 24852228 25007839 + MGP_LPJ_P0024770 Arhgap18 protein_coding protein_coding MGP_LPJ_T0024771.1 MGP_LPJ_G0017020.1 mouse_genomes_project 10 24905932 24934474 + MGP_LPJ_P0024771 Arhgap18 protein_coding protein_coding MGP_LPJ_T0024772.1 MGP_LPJ_G0017020.1 mouse_genomes_project 10 24948361 25007649 + Arhgap18 protein_coding processed_transcript MGP_LPJ_T0098845.1 MGP_LPJ_G0037108.1 mouse_genomes_project 10 57833892 57833999 - Gm23058 snRNA snRNA MGP_LPJ_T0027109.1 MGP_LPJ_G0017677.1 mouse_genomes_project 10 121834067 121839689 - MGP_LPJ_P0027109 Iltifb protein_coding protein_coding MGP_LPJ_T0098820.1 MGP_LPJ_G0037083.1 mouse_genomes_project 10 7237304 7237468 + Gm25682 snRNA snRNA MGP_LPJ_T0025634.1 MGP_LPJ_G0017260.1 mouse_genomes_project 10 75589037 75641179 + MGP_LPJ_P0025634 Gnaz protein_coding protein_coding MGP_LPJ_T0025635.1 MGP_LPJ_G0017260.1 mouse_genomes_project 10 75589069 75614976 + Gnaz protein_coding processed_transcript MGP_LPJ_T0025636.1 MGP_LPJ_G0017260.1 mouse_genomes_project 10 75613772 75641168 + MGP_LPJ_P0025636 Gnaz protein_coding protein_coding MGP_LPJ_T0098857.1 MGP_LPJ_G0037120.1 mouse_genomes_project 10 86328375 86328472 - Gm24226 snRNA snRNA MGP_LPJ_T0024847.1 MGP_LPJ_G0017054.1 mouse_genomes_project 10 32617903 32620989 + MGP_LPJ_P0024847 Tspyl1 protein_coding protein_coding MGP_LPJ_T0026318.1 MGP_LPJ_G0017452.1 mouse_genomes_project 10 82329964 82332764 - MGP_LPJ_P0026318 4930442H23Rik protein_coding protein_coding MGP_LPJ_T0025055.1 MGP_LPJ_G0017115.1 mouse_genomes_project 10 42780221 42993557 - MGP_LPJ_P0025055 Aim1 protein_coding protein_coding MGP_LPJ_T0025056.1 MGP_LPJ_G0017115.1 mouse_genomes_project 10 42781454 42894437 - MGP_LPJ_P0025056 Aim1 protein_coding protein_coding MGP_LPJ_T0025321.1 MGP_LPJ_G0017203.1 mouse_genomes_project 10 61893969 61897365 - MGP_LPJ_P0025321 2010107G23Rik protein_coding protein_coding MGP_LPJ_T0025322.1 MGP_LPJ_G0017203.1 mouse_genomes_project 10 61894524 61897260 - MGP_LPJ_P0025322 2010107G23Rik protein_coding protein_coding MGP_LPJ_T0025323.1 MGP_LPJ_G0017203.1 mouse_genomes_project 10 61894524 61897283 - MGP_LPJ_P0025323 2010107G23Rik protein_coding protein_coding MGP_LPJ_T0025324.1 MGP_LPJ_G0017203.1 mouse_genomes_project 10 61894524 61897365 - MGP_LPJ_P0025324 2010107G23Rik protein_coding protein_coding MGP_LPJ_T0025325.1 MGP_LPJ_G0017203.1 mouse_genomes_project 10 61894526 61897328 - MGP_LPJ_P0025325 2010107G23Rik protein_coding protein_coding MGP_LPJ_T0025326.1 MGP_LPJ_G0017203.1 mouse_genomes_project 10 61895149 61930630 - MGP_LPJ_P0025326 2010107G23Rik protein_coding protein_coding MGP_LPJ_T0025327.1 MGP_LPJ_G0017203.1 mouse_genomes_project 10 61895231 61924026 - MGP_LPJ_P0025327 2010107G23Rik protein_coding protein_coding MGP_LPJ_T0025328.1 MGP_LPJ_G0017203.1 mouse_genomes_project 10 61895232 61935129 - MGP_LPJ_P0025328 2010107G23Rik protein_coding protein_coding MGP_LPJ_T0025329.1 MGP_LPJ_G0017203.1 mouse_genomes_project 10 61895234 61896811 - MGP_LPJ_P0025329 2010107G23Rik protein_coding protein_coding MGP_LPJ_T0025330.1 MGP_LPJ_G0017203.1 mouse_genomes_project 10 61896261 61935133 - MGP_LPJ_P0025330 2010107G23Rik protein_coding protein_coding MGP_LPJ_T0025332.1 MGP_LPJ_G0017203.1 mouse_genomes_project 10 61923840 61935143 - 2010107G23Rik protein_coding processed_transcript MGP_LPJ_T0026991.1 MGP_LPJ_G0017633.1 mouse_genomes_project 10 114198764 114346402 + MGP_LPJ_P0026991 Osbpl8 protein_coding protein_coding MGP_LPJ_T0026656.1 MGP_LPJ_G0017539.1 mouse_genomes_project 10 90072029 90106195 - MGP_LPJ_P0026656 Dram1 protein_coding protein_coding MGP_LPJ_T0026657.1 MGP_LPJ_G0017539.1 mouse_genomes_project 10 90072029 90106116 - MGP_LPJ_P0026657 Dram1 protein_coding nonsense_mediated_decay MGP_LPJ_T0026658.1 MGP_LPJ_G0017539.1 mouse_genomes_project 10 90089626 90129900 - MGP_LPJ_P0026658 Dram1 protein_coding protein_coding MGP_LPJ_T0024675.1 MGP_LPJ_G0016979.1 mouse_genomes_project 10 19496495 19617969 + MGP_LPJ_P0024675 Sgk1 protein_coding protein_coding MGP_LPJ_T0024676.1 MGP_LPJ_G0016979.1 mouse_genomes_project 10 19496680 19513423 + Sgk1 protein_coding processed_transcript MGP_LPJ_T0024677.1 MGP_LPJ_G0016979.1 mouse_genomes_project 10 19544260 19608682 + MGP_LPJ_P0024677 Sgk1 protein_coding protein_coding MGP_LPJ_T0024678.1 MGP_LPJ_G0016979.1 mouse_genomes_project 10 19595543 19613969 + MGP_LPJ_P0024678 Sgk1 protein_coding protein_coding MGP_LPJ_T0024679.1 MGP_LPJ_G0016979.1 mouse_genomes_project 10 19610500 19613950 + MGP_LPJ_P0024679 Sgk1 protein_coding protein_coding MGP_LPJ_T0024680.1 MGP_LPJ_G0016979.1 mouse_genomes_project 10 19610500 19617974 + MGP_LPJ_P0024680 Sgk1 protein_coding protein_coding MGP_LPJ_T0024681.1 MGP_LPJ_G0016979.1 mouse_genomes_project 10 19612763 19613677 + Sgk1 protein_coding retained_intron MGP_LPJ_T0024682.1 MGP_LPJ_G0016979.1 mouse_genomes_project 10 19612770 19617978 + MGP_LPJ_P0024682 Sgk1 protein_coding protein_coding MGP_LPJ_T0024683.1 MGP_LPJ_G0016979.1 mouse_genomes_project 10 19612791 19614417 + Sgk1 protein_coding retained_intron MGP_LPJ_T0024684.1 MGP_LPJ_G0016979.1 mouse_genomes_project 10 19612990 19615512 + MGP_LPJ_P0024684 Sgk1 protein_coding protein_coding MGP_LPJ_T0024685.1 MGP_LPJ_G0016979.1 mouse_genomes_project 10 19614666 19616316 + Sgk1 protein_coding retained_intron MGP_LPJ_T0024664.1 MGP_LPJ_G0016974.1 mouse_genomes_project 10 18713761 18752757 - MGP_LPJ_P0024664 Myb protein_coding protein_coding MGP_LPJ_T0024665.1 MGP_LPJ_G0016974.1 mouse_genomes_project 10 18714102 18752757 - MGP_LPJ_P0024665 Myb protein_coding protein_coding MGP_LPJ_T0024666.1 MGP_LPJ_G0016974.1 mouse_genomes_project 10 18729960 18752702 - Myb protein_coding retained_intron MGP_LPJ_T0026031.1 MGP_LPJ_G0017378.1 mouse_genomes_project 10 80923943 80925854 + MGP_LPJ_P0026031 Elane protein_coding protein_coding MGP_LPJ_T0027527.1 MGP_LPJ_G0017834.1 mouse_genomes_project 10 134081325 134082213 - MGP_LPJ_P0027527 Olfr805 protein_coding protein_coding MGP_LPJ_T0027528.1 MGP_LPJ_G0017834.1 mouse_genomes_project 10 134081325 134158082 - MGP_LPJ_P0027528 Olfr805 protein_coding protein_coding MGP_LPJ_T0027530.1 MGP_LPJ_G0017834.1 mouse_genomes_project 10 134082071 134141207 - MGP_LPJ_P0027530 Olfr805 protein_coding protein_coding MGP_LPJ_T0026709.1 MGP_LPJ_G0017552.1 mouse_genomes_project 10 91472340 91522583 - MGP_LPJ_P0026709 Scyl2 protein_coding protein_coding MGP_LPJ_T0026710.1 MGP_LPJ_G0017552.1 mouse_genomes_project 10 91473288 91488503 - Scyl2 protein_coding processed_transcript MGP_LPJ_T0026711.1 MGP_LPJ_G0017552.1 mouse_genomes_project 10 91473571 91522566 - MGP_LPJ_P0026711 Scyl2 protein_coding protein_coding MGP_LPJ_T0026712.1 MGP_LPJ_G0017552.1 mouse_genomes_project 10 91483783 91488207 - Scyl2 protein_coding retained_intron MGP_LPJ_T0026713.1 MGP_LPJ_G0017552.1 mouse_genomes_project 10 91484781 91494988 - MGP_LPJ_P0026713 Scyl2 protein_coding protein_coding MGP_LPJ_T0026714.1 MGP_LPJ_G0017552.1 mouse_genomes_project 10 91502224 91522566 - Scyl2 protein_coding retained_intron MGP_LPJ_T0026715.1 MGP_LPJ_G0017552.1 mouse_genomes_project 10 91511919 91522561 - Scyl2 protein_coding retained_intron MGP_LPJ_T0003104.1 MGP_LPJ_G0002895.1 mouse_genomes_project 10 101576972 101582317 - Gm16239 antisense antisense MGP_LPJ_T0098841.1 MGP_LPJ_G0037104.1 mouse_genomes_project 10 52129721 52129828 + Gm25664 snRNA snRNA MGP_LPJ_T0097968.1 MGP_LPJ_G0036249.1 mouse_genomes_project 10 63986945 63987309 + pseudogene pseudogene MGP_LPJ_T0026048.1 MGP_LPJ_G0017385.1 mouse_genomes_project 10 81008660 81017571 + MGP_LPJ_P0026048 Wdr18 protein_coding protein_coding MGP_LPJ_T0025911.1 MGP_LPJ_G0017337.1 mouse_genomes_project 10 79334014 79362031 - MGP_LPJ_P0025911 Pdxk protein_coding protein_coding MGP_LPJ_T0003073.1 MGP_LPJ_G0002871.1 mouse_genomes_project 10 77298379 77303913 - Gm15343 antisense antisense MGP_LPJ_T0025933.1 MGP_LPJ_G0017351.1 mouse_genomes_project 10 80038896 80065988 - MGP_LPJ_P0025933 2610008E11Rik protein_coding protein_coding MGP_LPJ_T0098836.1 MGP_LPJ_G0037099.1 mouse_genomes_project 10 44166473 44166536 + Gm27723 snRNA snRNA MGP_LPJ_T0027342.1 MGP_LPJ_G0017750.1 mouse_genomes_project 10 132036146 132042534 + MGP_LPJ_P0027342 protein_coding protein_coding MGP_LPJ_T0025134.1 MGP_LPJ_G0017146.1 mouse_genomes_project 10 55364395 55584361 - MGP_LPJ_P0025134 Tbc1d32 protein_coding protein_coding MGP_LPJ_T0027517.1 MGP_LPJ_G0017827.1 mouse_genomes_project 10 133944317 133945253 + MGP_LPJ_P0027517 Olfr792 protein_coding protein_coding MGP_LPJ_T0025116.1 MGP_LPJ_G0017141.1 mouse_genomes_project 10 52590195 52599187 + MGP_LPJ_P0025116 Pln protein_coding protein_coding MGP_LPJ_T0025117.1 MGP_LPJ_G0017141.1 mouse_genomes_project 10 52590195 52599187 + MGP_LPJ_P0025117 Pln protein_coding protein_coding MGP_LPJ_T0009626.1 MGP_LPJ_G0007744.1 mouse_genomes_project 10 86889327 86889431 + Gm25281 miRNA miRNA MGP_LPJ_T0025588.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 73636635 74916042 + Pcdh15 protein_coding retained_intron MGP_LPJ_T0025589.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 73636728 74282586 + Pcdh15 protein_coding retained_intron MGP_LPJ_T0025590.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 73636746 74042341 + Pcdh15 protein_coding retained_intron MGP_LPJ_T0025591.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389673 75249166 + MGP_LPJ_P0025591 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025592.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389673 75239554 + MGP_LPJ_P0025592 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025593.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389689 75237453 + MGP_LPJ_P0025593 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025594.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389689 75237325 + MGP_LPJ_P0025594 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025595.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389689 75249516 + MGP_LPJ_P0025595 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025596.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389689 75249516 + MGP_LPJ_P0025596 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025597.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389689 75237453 + MGP_LPJ_P0025597 Pcdh15 protein_coding nonsense_mediated_decay MGP_LPJ_T0025598.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389689 75237453 + MGP_LPJ_P0025598 Pcdh15 protein_coding nonsense_mediated_decay MGP_LPJ_T0025599.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389689 75237453 + MGP_LPJ_P0025599 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025600.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389689 75251267 + MGP_LPJ_P0025600 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025601.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389689 75254526 + MGP_LPJ_P0025601 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025602.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389689 75249516 + MGP_LPJ_P0025602 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025603.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389689 75249516 + MGP_LPJ_P0025603 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025604.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389689 75237453 + MGP_LPJ_P0025604 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025605.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389689 75237453 + MGP_LPJ_P0025605 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025606.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389689 75237453 + MGP_LPJ_P0025606 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025607.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389689 75249516 + MGP_LPJ_P0025607 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025608.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389689 75249516 + MGP_LPJ_P0025608 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025609.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389689 75249516 + MGP_LPJ_P0025609 Pcdh15 protein_coding nonsense_mediated_decay MGP_LPJ_T0025610.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389689 75249516 + MGP_LPJ_P0025610 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025611.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389689 75251103 + MGP_LPJ_P0025611 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025612.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389689 75251103 + MGP_LPJ_P0025612 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025613.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389689 75237453 + MGP_LPJ_P0025613 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025614.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389689 75237453 + MGP_LPJ_P0025614 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025615.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389689 75238387 + MGP_LPJ_P0025615 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025616.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389749 75110592 + MGP_LPJ_P0025616 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025617.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389749 75110592 + MGP_LPJ_P0025617 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025618.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74389749 75110592 + MGP_LPJ_P0025618 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025619.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74528076 75249007 + MGP_LPJ_P0025619 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025620.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74528076 75250957 + MGP_LPJ_P0025620 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025621.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74528076 75250861 + MGP_LPJ_P0025621 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025622.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74901881 74931162 + Pcdh15 protein_coding processed_transcript MGP_LPJ_T0025623.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74954439 75237456 + MGP_LPJ_P0025623 Pcdh15 protein_coding protein_coding MGP_LPJ_T0025624.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 74985781 74996625 + Pcdh15 protein_coding retained_intron MGP_LPJ_T0025625.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 75189472 75229405 + Pcdh15 protein_coding retained_intron MGP_LPJ_T0025626.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 75235700 75251003 + Pcdh15 protein_coding processed_transcript MGP_LPJ_T0025627.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 75236197 75241469 + Pcdh15 protein_coding retained_intron MGP_LPJ_T0025628.1 MGP_LPJ_G0017258.1 mouse_genomes_project 10 75236622 75247153 + Pcdh15 protein_coding processed_transcript MGP_LPJ_T0100080.1 MGP_LPJ_G0038343.1 mouse_genomes_project 10 58223999 58224075 - Gm25055 snoRNA snoRNA MGP_LPJ_T0100070.1 MGP_LPJ_G0038333.1 mouse_genomes_project 10 36621490 36621622 + Gm24889 snoRNA snoRNA MGP_LPJ_T0025794.1 MGP_LPJ_G0017305.1 mouse_genomes_project 10 78026987 78028435 - MGP_LPJ_P0025794 Gm10941 protein_coding protein_coding MGP_LPJ_T0025097.1 MGP_LPJ_G0017132.1 mouse_genomes_project 10 51237732 51243650 + MGP_LPJ_P0025097 Vgll2 protein_coding protein_coding MGP_LPJ_T0025098.1 MGP_LPJ_G0017132.1 mouse_genomes_project 10 51237758 51243522 + MGP_LPJ_P0025098 Vgll2 protein_coding protein_coding MGP_LPJ_T0026502.1 MGP_LPJ_G0017492.1 mouse_genomes_project 10 84092582 84105482 + Hcfc2 protein_coding processed_transcript MGP_LPJ_T0026503.1 MGP_LPJ_G0017492.1 mouse_genomes_project 10 84095439 84140288 + MGP_LPJ_P0026503 Hcfc2 protein_coding protein_coding MGP_LPJ_T0026504.1 MGP_LPJ_G0017492.1 mouse_genomes_project 10 84095643 84108655 + MGP_LPJ_P0026504 Hcfc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0026505.1 MGP_LPJ_G0017492.1 mouse_genomes_project 10 84125713 84139196 + MGP_LPJ_P0026505 Hcfc2 protein_coding protein_coding MGP_LPJ_T0024710.1 MGP_LPJ_G0016991.1 mouse_genomes_project 10 21838822 21839936 + MGP_LPJ_P0024710 Taar1 protein_coding protein_coding MGP_LPJ_T0003111.1 MGP_LPJ_G0002899.1 mouse_genomes_project 10 119775965 119779151 + Kcnmb4os1 antisense antisense MGP_LPJ_T0100078.1 MGP_LPJ_G0038341.1 mouse_genomes_project 10 47480172 47480301 + Gm23584 snoRNA snoRNA MGP_LPJ_T0024412.1 MGP_LPJ_G0016908.1 mouse_genomes_project 10 4137123 4154558 - MGP_LPJ_P0024412 Cnksr3 protein_coding protein_coding MGP_LPJ_T0024413.1 MGP_LPJ_G0016908.1 mouse_genomes_project 10 4137123 4244883 - MGP_LPJ_P0024413 Cnksr3 protein_coding protein_coding MGP_LPJ_T0027564.1 MGP_LPJ_G0017860.1 mouse_genomes_project 10 134955946 134998551 - MGP_LPJ_P0027564 protein_coding protein_coding MGP_LPJ_T0100106.1 MGP_LPJ_G0038369.1 mouse_genomes_project 10 119690551 119690688 + Gm26495 snoRNA snoRNA MGP_LPJ_T0098822.1 MGP_LPJ_G0037085.1 mouse_genomes_project 10 10024331 10024431 - Gm23044 snRNA snRNA MGP_LPJ_T0026690.1 MGP_LPJ_G0017547.1 mouse_genomes_project 10 90684073 90730849 + MGP_LPJ_P0026690 Slc5a8 protein_coding protein_coding MGP_LPJ_T0026545.1 MGP_LPJ_G0017503.1 mouse_genomes_project 10 85872199 85947477 - MGP_LPJ_P0026545 Nuak1 protein_coding protein_coding MGP_LPJ_T0026546.1 MGP_LPJ_G0017503.1 mouse_genomes_project 10 85876590 85895169 - MGP_LPJ_P0026546 Nuak1 protein_coding protein_coding MGP_LPJ_T0026993.1 MGP_LPJ_G0017635.1 mouse_genomes_project 10 114541581 114565529 + MGP_LPJ_P0026993 Nap1l1 protein_coding protein_coding MGP_LPJ_T0026994.1 MGP_LPJ_G0017635.1 mouse_genomes_project 10 114549006 114566785 + MGP_LPJ_P0026994 Nap1l1 protein_coding protein_coding MGP_LPJ_T0026705.1 MGP_LPJ_G0017550.1 mouse_genomes_project 10 91273255 91330141 - MGP_LPJ_P0026705 Nr1h4 protein_coding protein_coding MGP_LPJ_T0026706.1 MGP_LPJ_G0017550.1 mouse_genomes_project 10 91273255 91330132 - MGP_LPJ_P0026706 Nr1h4 protein_coding protein_coding MGP_LPJ_T0026707.1 MGP_LPJ_G0017550.1 mouse_genomes_project 10 91273394 91358138 - MGP_LPJ_P0026707 Nr1h4 protein_coding protein_coding MGP_LPJ_T0098824.1 MGP_LPJ_G0037087.1 mouse_genomes_project 10 14529469 14529566 + Gm25382 snRNA snRNA MGP_LPJ_T0100090.1 MGP_LPJ_G0038353.1 mouse_genomes_project 10 78761417 78761471 - Gm22871 snoRNA snoRNA MGP_LPJ_T0009625.1 MGP_LPJ_G0007743.1 mouse_genomes_project 10 86831689 86831789 - Gm27392 miRNA miRNA MGP_LPJ_T0006172.1 MGP_LPJ_G0005154.1 mouse_genomes_project 10 109230210 109234038 - C230021G24Rik lincRNA lincRNA MGP_LPJ_T0027345.1 MGP_LPJ_G0017752.1 mouse_genomes_project 10 132132391 132144253 + MGP_LPJ_P0027345 BC089597 protein_coding protein_coding MGP_LPJ_T0025076.1 MGP_LPJ_G0017123.1 mouse_genomes_project 10 48200406 48912656 - MGP_LPJ_P0025076 Grik2 protein_coding protein_coding MGP_LPJ_T0025077.1 MGP_LPJ_G0017123.1 mouse_genomes_project 10 48200789 48354675 - Grik2 protein_coding retained_intron MGP_LPJ_T0025078.1 MGP_LPJ_G0017123.1 mouse_genomes_project 10 48200789 48907161 - MGP_LPJ_P0025078 Grik2 protein_coding protein_coding MGP_LPJ_T0025079.1 MGP_LPJ_G0017123.1 mouse_genomes_project 10 48201673 48907161 - MGP_LPJ_P0025079 Grik2 protein_coding protein_coding MGP_LPJ_T0025080.1 MGP_LPJ_G0017123.1 mouse_genomes_project 10 48201935 48907311 - MGP_LPJ_P0025080 Grik2 protein_coding protein_coding MGP_LPJ_T0025081.1 MGP_LPJ_G0017123.1 mouse_genomes_project 10 48202074 48204878 - Grik2 protein_coding retained_intron MGP_LPJ_T0025082.1 MGP_LPJ_G0017123.1 mouse_genomes_project 10 48205987 48907161 - MGP_LPJ_P0025082 Grik2 protein_coding protein_coding MGP_LPJ_T0025083.1 MGP_LPJ_G0017123.1 mouse_genomes_project 10 48610180 48912644 - MGP_LPJ_P0025083 Grik2 protein_coding protein_coding MGP_LPJ_T0003049.1 MGP_LPJ_G0002851.1 mouse_genomes_project 10 41433838 41434321 - Gm15200 antisense antisense MGP_LPJ_T0027344.1 MGP_LPJ_G0017751.1 mouse_genomes_project 10 132116234 132126645 + MGP_LPJ_P0027344 Rdh19 protein_coding protein_coding MGP_LPJ_T0024415.1 MGP_LPJ_G0016910.1 mouse_genomes_project 10 4648550 4667124 + MGP_LPJ_P0024415 Lrp11 protein_coding protein_coding MGP_LPJ_T0024416.1 MGP_LPJ_G0016910.1 mouse_genomes_project 10 4648567 4685995 + MGP_LPJ_P0024416 Lrp11 protein_coding protein_coding MGP_LPJ_T0024417.1 MGP_LPJ_G0016910.1 mouse_genomes_project 10 4648729 4685995 + MGP_LPJ_P0024417 Lrp11 protein_coding protein_coding MGP_LPJ_T0024418.1 MGP_LPJ_G0016910.1 mouse_genomes_project 10 4648877 4684534 + MGP_LPJ_P0024418 Lrp11 protein_coding protein_coding MGP_LPJ_T0024419.1 MGP_LPJ_G0016910.1 mouse_genomes_project 10 4654827 4684264 + MGP_LPJ_P0024419 Lrp11 protein_coding protein_coding MGP_LPJ_T0012432.1 MGP_LPJ_G0010523.1 mouse_genomes_project 10 98735293 98736202 + processed_pseudogene processed_pseudogene MGP_LPJ_T0024866.1 MGP_LPJ_G0017061.1 mouse_genomes_project 10 35536221 35543610 - MGP_LPJ_P0024866 Marcks protein_coding protein_coding MGP_LPJ_T0006138.1 MGP_LPJ_G0005136.1 mouse_genomes_project 10 82796771 82800195 - Gm26896 lincRNA lincRNA MGP_LPJ_T0027052.1 MGP_LPJ_G0017659.1 mouse_genomes_project 10 119848469 119947790 - MGP_LPJ_P0027052 Cnot2 protein_coding protein_coding MGP_LPJ_T0027053.1 MGP_LPJ_G0017659.1 mouse_genomes_project 10 119848473 119947775 - MGP_LPJ_P0027053 Cnot2 protein_coding nonsense_mediated_decay MGP_LPJ_T0027054.1 MGP_LPJ_G0017659.1 mouse_genomes_project 10 119848473 119913154 - MGP_LPJ_P0027054 Cnot2 protein_coding protein_coding MGP_LPJ_T0027055.1 MGP_LPJ_G0017659.1 mouse_genomes_project 10 119848474 119947779 - MGP_LPJ_P0027055 Cnot2 protein_coding protein_coding MGP_LPJ_T0027056.1 MGP_LPJ_G0017659.1 mouse_genomes_project 10 119849095 119947790 - MGP_LPJ_P0027056 Cnot2 protein_coding protein_coding MGP_LPJ_T0027057.1 MGP_LPJ_G0017659.1 mouse_genomes_project 10 119849505 119947781 - MGP_LPJ_P0027057 Cnot2 protein_coding protein_coding MGP_LPJ_T0027058.1 MGP_LPJ_G0017659.1 mouse_genomes_project 10 119849508 119913127 - MGP_LPJ_P0027058 Cnot2 protein_coding protein_coding MGP_LPJ_T0027059.1 MGP_LPJ_G0017659.1 mouse_genomes_project 10 119861815 119947762 - Cnot2 protein_coding processed_transcript MGP_LPJ_T0027060.1 MGP_LPJ_G0017659.1 mouse_genomes_project 10 119862065 119947772 - Cnot2 protein_coding processed_transcript MGP_LPJ_T0027061.1 MGP_LPJ_G0017659.1 mouse_genomes_project 10 119863096 119947769 - Cnot2 protein_coding processed_transcript MGP_LPJ_T0027062.1 MGP_LPJ_G0017659.1 mouse_genomes_project 10 119863101 119947764 - Cnot2 protein_coding processed_transcript MGP_LPJ_T0027063.1 MGP_LPJ_G0017659.1 mouse_genomes_project 10 119867539 119947744 - MGP_LPJ_P0027063 Cnot2 protein_coding nonsense_mediated_decay MGP_LPJ_T0027064.1 MGP_LPJ_G0017659.1 mouse_genomes_project 10 119869880 119947770 - Cnot2 protein_coding processed_transcript MGP_LPJ_T0027065.1 MGP_LPJ_G0017659.1 mouse_genomes_project 10 119874243 119947775 - Cnot2 protein_coding processed_transcript MGP_LPJ_T0027066.1 MGP_LPJ_G0017659.1 mouse_genomes_project 10 119874243 119947790 - MGP_LPJ_P0027066 Cnot2 protein_coding protein_coding MGP_LPJ_T0027067.1 MGP_LPJ_G0017659.1 mouse_genomes_project 10 119874612 119947762 - Cnot2 protein_coding processed_transcript MGP_LPJ_T0026946.1 MGP_LPJ_G0017617.1 mouse_genomes_project 10 108496504 108582308 - MGP_LPJ_P0026946 Mettl25 protein_coding protein_coding MGP_LPJ_T0026947.1 MGP_LPJ_G0017617.1 mouse_genomes_project 10 108496570 108582310 - MGP_LPJ_P0026947 Mettl25 protein_coding nonsense_mediated_decay MGP_LPJ_T0026948.1 MGP_LPJ_G0017617.1 mouse_genomes_project 10 108567502 108582301 - MGP_LPJ_P0026948 Mettl25 protein_coding nonsense_mediated_decay MGP_LPJ_T0026949.1 MGP_LPJ_G0017617.1 mouse_genomes_project 10 108580134 108582141 - Mettl25 protein_coding processed_transcript MGP_LPJ_T0012421.1 MGP_LPJ_G0010512.1 mouse_genomes_project 10 74256565 74257114 - processed_pseudogene processed_pseudogene MGP_LPJ_T0024497.1 MGP_LPJ_G0016930.1 mouse_genomes_project 10 8511109 8636844 + MGP_LPJ_P0024497 Epm2a protein_coding protein_coding MGP_LPJ_T0024498.1 MGP_LPJ_G0016930.1 mouse_genomes_project 10 8511158 8624346 + Epm2a protein_coding processed_transcript MGP_LPJ_T0027170.1 MGP_LPJ_G0017697.1 mouse_genomes_project 10 125460085 125500965 + MGP_LPJ_P0027170 D930020B18Rik protein_coding protein_coding MGP_LPJ_T0027171.1 MGP_LPJ_G0017697.1 mouse_genomes_project 10 125460198 125517394 + MGP_LPJ_P0027171 D930020B18Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0027172.1 MGP_LPJ_G0017697.1 mouse_genomes_project 10 125460291 125517123 + MGP_LPJ_P0027172 D930020B18Rik protein_coding protein_coding MGP_LPJ_T0027173.1 MGP_LPJ_G0017697.1 mouse_genomes_project 10 125460369 125517123 + MGP_LPJ_P0027173 D930020B18Rik protein_coding protein_coding MGP_LPJ_T0026953.1 MGP_LPJ_G0017619.1 mouse_genomes_project 10 109233579 109712982 + MGP_LPJ_P0026953 Ppfia2 protein_coding protein_coding MGP_LPJ_T0026954.1 MGP_LPJ_G0017619.1 mouse_genomes_project 10 109233615 109553741 + MGP_LPJ_P0026954 Ppfia2 protein_coding protein_coding MGP_LPJ_T0097966.1 MGP_LPJ_G0036247.1 mouse_genomes_project 10 58337065 58337634 - pseudogene pseudogene MGP_LPJ_T0100058.1 MGP_LPJ_G0038321.1 mouse_genomes_project 10 9583050 9583260 + Gm25139 snoRNA snoRNA MGP_LPJ_T0024887.1 MGP_LPJ_G0017067.1 mouse_genomes_project 10 37838724 37993410 + MGP_LPJ_P0024887 Fyn protein_coding protein_coding MGP_LPJ_T0024888.1 MGP_LPJ_G0017067.1 mouse_genomes_project 10 37839633 38044174 + MGP_LPJ_P0024888 Fyn protein_coding protein_coding MGP_LPJ_T0024889.1 MGP_LPJ_G0017067.1 mouse_genomes_project 10 37839667 38044165 + MGP_LPJ_P0024889 Fyn protein_coding protein_coding MGP_LPJ_T0024890.1 MGP_LPJ_G0017067.1 mouse_genomes_project 10 37839672 38043216 + MGP_LPJ_P0024890 Fyn protein_coding protein_coding MGP_LPJ_T0024891.1 MGP_LPJ_G0017067.1 mouse_genomes_project 10 37840027 38044167 + MGP_LPJ_P0024891 Fyn protein_coding protein_coding MGP_LPJ_T0024892.1 MGP_LPJ_G0017067.1 mouse_genomes_project 10 37890570 37989601 + MGP_LPJ_P0024892 Fyn protein_coding protein_coding MGP_LPJ_T0024893.1 MGP_LPJ_G0017067.1 mouse_genomes_project 10 37930459 38043148 + MGP_LPJ_P0024893 Fyn protein_coding protein_coding MGP_LPJ_T0024894.1 MGP_LPJ_G0017067.1 mouse_genomes_project 10 37930569 38043148 + MGP_LPJ_P0024894 Fyn protein_coding protein_coding MGP_LPJ_T0024895.1 MGP_LPJ_G0017067.1 mouse_genomes_project 10 38012044 38030189 + Fyn protein_coding processed_transcript MGP_LPJ_T0003098.1 MGP_LPJ_G0002891.1 mouse_genomes_project 10 89566743 89568729 - Igf1os antisense antisense MGP_LPJ_T0003099.1 MGP_LPJ_G0002891.1 mouse_genomes_project 10 89566755 89606375 - Igf1os antisense antisense MGP_LPJ_T0026659.1 MGP_LPJ_G0017540.1 mouse_genomes_project 10 90129951 90165692 + MGP_LPJ_P0026659 Gnptab protein_coding protein_coding MGP_LPJ_T0026660.1 MGP_LPJ_G0017540.1 mouse_genomes_project 10 90130043 90165649 + MGP_LPJ_P0026660 Gnptab protein_coding protein_coding MGP_LPJ_T0026661.1 MGP_LPJ_G0017540.1 mouse_genomes_project 10 90130043 90200535 + MGP_LPJ_P0026661 Gnptab protein_coding nonsense_mediated_decay MGP_LPJ_T0026662.1 MGP_LPJ_G0017540.1 mouse_genomes_project 10 90130045 90200544 + MGP_LPJ_P0026662 Gnptab protein_coding protein_coding MGP_LPJ_T0026663.1 MGP_LPJ_G0017540.1 mouse_genomes_project 10 90182605 90186467 + Gnptab protein_coding processed_transcript MGP_LPJ_T0026664.1 MGP_LPJ_G0017540.1 mouse_genomes_project 10 90186539 90193965 + Gnptab protein_coding processed_transcript MGP_LPJ_T0026665.1 MGP_LPJ_G0017540.1 mouse_genomes_project 10 90189222 90189908 + Gnptab protein_coding retained_intron MGP_LPJ_T0027136.1 MGP_LPJ_G0017684.1 mouse_genomes_project 10 123833842 123897241 - MGP_LPJ_P0027136 Irak3 protein_coding nonsense_mediated_decay MGP_LPJ_T0027137.1 MGP_LPJ_G0017684.1 mouse_genomes_project 10 123834394 123897202 - MGP_LPJ_P0027137 Irak3 protein_coding protein_coding MGP_LPJ_T0027138.1 MGP_LPJ_G0017684.1 mouse_genomes_project 10 123853252 123865438 - Irak3 protein_coding processed_transcript MGP_LPJ_T0027139.1 MGP_LPJ_G0017684.1 mouse_genomes_project 10 123858601 123897330 - Irak3 protein_coding retained_intron MGP_LPJ_T0027247.1 MGP_LPJ_G0017722.1 mouse_genomes_project 10 131336380 131342210 - MGP_LPJ_P0027247 Arhgef25 protein_coding unknown_likely_coding MGP_LPJ_T0027248.1 MGP_LPJ_G0017722.1 mouse_genomes_project 10 131336383 131343917 - MGP_LPJ_P0027248 Arhgef25 protein_coding protein_coding MGP_LPJ_T0027249.1 MGP_LPJ_G0017722.1 mouse_genomes_project 10 131336383 131343686 - MGP_LPJ_P0027249 Arhgef25 protein_coding protein_coding MGP_LPJ_T0100084.1 MGP_LPJ_G0038347.1 mouse_genomes_project 10 62775907 62776036 - Gm25862 snoRNA snoRNA MGP_LPJ_T0024737.1 MGP_LPJ_G0017011.1 mouse_genomes_project 10 22850451 22904494 + MGP_LPJ_P0024737 Med23 protein_coding protein_coding MGP_LPJ_T0024738.1 MGP_LPJ_G0017011.1 mouse_genomes_project 10 22850502 22876232 + Med23 protein_coding retained_intron MGP_LPJ_T0024739.1 MGP_LPJ_G0017011.1 mouse_genomes_project 10 22850502 22897573 + MGP_LPJ_P0024739 Med23 protein_coding nonsense_mediated_decay MGP_LPJ_T0024740.1 MGP_LPJ_G0017011.1 mouse_genomes_project 10 22850512 22904272 + MGP_LPJ_P0024740 Med23 protein_coding protein_coding MGP_LPJ_T0024741.1 MGP_LPJ_G0017011.1 mouse_genomes_project 10 22850563 22887499 + Med23 protein_coding processed_transcript MGP_LPJ_T0024742.1 MGP_LPJ_G0017011.1 mouse_genomes_project 10 22850774 22859005 + MGP_LPJ_P0024742 Med23 protein_coding protein_coding MGP_LPJ_T0024743.1 MGP_LPJ_G0017011.1 mouse_genomes_project 10 22851108 22856132 + Med23 protein_coding retained_intron MGP_LPJ_T0024744.1 MGP_LPJ_G0017011.1 mouse_genomes_project 10 22857408 22874484 + MGP_LPJ_P0024744 Med23 protein_coding protein_coding MGP_LPJ_T0024745.1 MGP_LPJ_G0017011.1 mouse_genomes_project 10 22870257 22903831 + MGP_LPJ_P0024745 Med23 protein_coding protein_coding MGP_LPJ_T0024746.1 MGP_LPJ_G0017011.1 mouse_genomes_project 10 22872773 22874476 + Med23 protein_coding retained_intron MGP_LPJ_T0026898.1 MGP_LPJ_G0017604.1 mouse_genomes_project 10 102460704 102562922 + MGP_LPJ_P0026898 Kitl protein_coding protein_coding MGP_LPJ_T0026899.1 MGP_LPJ_G0017604.1 mouse_genomes_project 10 102460900 102525420 + MGP_LPJ_P0026899 Kitl protein_coding protein_coding MGP_LPJ_T0026900.1 MGP_LPJ_G0017604.1 mouse_genomes_project 10 102460990 102558912 + MGP_LPJ_P0026900 Kitl protein_coding protein_coding MGP_LPJ_T0026248.1 MGP_LPJ_G0017431.1 mouse_genomes_project 10 81915898 81922625 + MGP_LPJ_P0026248 Sf3a2 protein_coding protein_coding MGP_LPJ_T0026249.1 MGP_LPJ_G0017431.1 mouse_genomes_project 10 81916432 81921708 + MGP_LPJ_P0026249 Sf3a2 protein_coding protein_coding MGP_LPJ_T0026250.1 MGP_LPJ_G0017431.1 mouse_genomes_project 10 81916669 81920102 + MGP_LPJ_P0026250 Sf3a2 protein_coding protein_coding MGP_LPJ_T0026251.1 MGP_LPJ_G0017431.1 mouse_genomes_project 10 81920200 81921718 + Sf3a2 protein_coding retained_intron MGP_LPJ_T0024748.1 MGP_LPJ_G0017013.1 mouse_genomes_project 10 23167673 23237205 - Akap7 protein_coding processed_transcript MGP_LPJ_T0024749.1 MGP_LPJ_G0017013.1 mouse_genomes_project 10 23167673 23198003 - MGP_LPJ_P0024749 Akap7 protein_coding protein_coding MGP_LPJ_T0024750.1 MGP_LPJ_G0017013.1 mouse_genomes_project 10 23168700 23300799 - MGP_LPJ_P0024750 Akap7 protein_coding protein_coding MGP_LPJ_T0024751.1 MGP_LPJ_G0017013.1 mouse_genomes_project 10 23216473 23291375 - MGP_LPJ_P0024751 Akap7 protein_coding unknown_likely_coding MGP_LPJ_T0024752.1 MGP_LPJ_G0017013.1 mouse_genomes_project 10 23267412 23297731 - MGP_LPJ_P0024752 Akap7 protein_coding protein_coding MGP_LPJ_T0024753.1 MGP_LPJ_G0017013.1 mouse_genomes_project 10 23280267 23300742 - MGP_LPJ_P0024753 Akap7 protein_coding protein_coding MGP_LPJ_T0024754.1 MGP_LPJ_G0017013.1 mouse_genomes_project 10 23285660 23298703 - MGP_LPJ_P0024754 Akap7 protein_coding protein_coding MGP_LPJ_T0024755.1 MGP_LPJ_G0017013.1 mouse_genomes_project 10 23285761 23314451 - MGP_LPJ_P0024755 Akap7 protein_coding protein_coding MGP_LPJ_T0017069.1 MGP_LPJ_G0015053.1 mouse_genomes_project 10 88362746 88363723 - Gm15344 processed_transcript processed_transcript MGP_LPJ_T0024570.1 MGP_LPJ_G0016945.1 mouse_genomes_project 10 12041602 12119227 + MGP_LPJ_P0024570 Nmbr protein_coding protein_coding MGP_LPJ_T0024571.1 MGP_LPJ_G0016945.1 mouse_genomes_project 10 12041608 12105604 + Nmbr protein_coding processed_transcript MGP_LPJ_T0024572.1 MGP_LPJ_G0016945.1 mouse_genomes_project 10 12041620 12111470 + Nmbr protein_coding processed_transcript MGP_LPJ_T0024573.1 MGP_LPJ_G0016945.1 mouse_genomes_project 10 12041632 12119744 + MGP_LPJ_P0024573 Nmbr protein_coding protein_coding MGP_LPJ_T0024574.1 MGP_LPJ_G0016945.1 mouse_genomes_project 10 12041638 12053255 + Nmbr protein_coding retained_intron MGP_LPJ_T0024576.1 MGP_LPJ_G0016945.1 mouse_genomes_project 10 12112608 12123277 + MGP_LPJ_P0024576 Nmbr protein_coding protein_coding MGP_LPJ_T0024577.1 MGP_LPJ_G0016945.1 mouse_genomes_project 10 12112670 12123010 + MGP_LPJ_P0024577 Nmbr protein_coding nonsense_mediated_decay MGP_LPJ_T0024578.1 MGP_LPJ_G0016945.1 mouse_genomes_project 10 12112670 12123010 + MGP_LPJ_P0024578 Nmbr protein_coding protein_coding MGP_LPJ_T0012404.1 MGP_LPJ_G0010495.1 mouse_genomes_project 10 42090226 42090581 + processed_pseudogene processed_pseudogene MGP_LPJ_T0025279.1 MGP_LPJ_G0017188.1 mouse_genomes_project 10 60884164 60902582 + MGP_LPJ_P0025279 Tbata protein_coding protein_coding MGP_LPJ_T0025280.1 MGP_LPJ_G0017188.1 mouse_genomes_project 10 60884174 60892652 + MGP_LPJ_P0025280 Tbata protein_coding protein_coding MGP_LPJ_T0025281.1 MGP_LPJ_G0017188.1 mouse_genomes_project 10 60884196 60902587 + MGP_LPJ_P0025281 Tbata protein_coding protein_coding MGP_LPJ_T0025282.1 MGP_LPJ_G0017188.1 mouse_genomes_project 10 60886580 60895246 + MGP_LPJ_P0025282 Tbata protein_coding nonsense_mediated_decay MGP_LPJ_T0025283.1 MGP_LPJ_G0017188.1 mouse_genomes_project 10 60886622 60902568 + MGP_LPJ_P0025283 Tbata protein_coding unknown_likely_coding MGP_LPJ_T0025284.1 MGP_LPJ_G0017188.1 mouse_genomes_project 10 60887472 60892649 + Tbata protein_coding processed_transcript MGP_LPJ_T0025285.1 MGP_LPJ_G0017188.1 mouse_genomes_project 10 60887472 60892649 + Tbata protein_coding processed_transcript MGP_LPJ_T0025286.1 MGP_LPJ_G0017188.1 mouse_genomes_project 10 60887472 60892649 + Tbata protein_coding processed_transcript MGP_LPJ_T0025287.1 MGP_LPJ_G0017188.1 mouse_genomes_project 10 60887472 60892648 + MGP_LPJ_P0025287 Tbata protein_coding protein_coding MGP_LPJ_T0025288.1 MGP_LPJ_G0017188.1 mouse_genomes_project 10 60887599 60892649 + Tbata protein_coding processed_transcript MGP_LPJ_T0025289.1 MGP_LPJ_G0017188.1 mouse_genomes_project 10 60888148 60902585 + MGP_LPJ_P0025289 Tbata protein_coding nonsense_mediated_decay MGP_LPJ_T0027092.1 MGP_LPJ_G0017672.1 mouse_genomes_project 10 121181890 121207093 - MGP_LPJ_P0027092 Mdm2 protein_coding protein_coding MGP_LPJ_T0027093.1 MGP_LPJ_G0017672.1 mouse_genomes_project 10 121181890 121207093 - MGP_LPJ_P0027093 Mdm2 protein_coding protein_coding MGP_LPJ_T0027094.1 MGP_LPJ_G0017672.1 mouse_genomes_project 10 121181897 121206357 - MGP_LPJ_P0027094 Mdm2 protein_coding nonsense_mediated_decay MGP_LPJ_T0027095.1 MGP_LPJ_G0017672.1 mouse_genomes_project 10 121183111 121207020 - Mdm2 protein_coding retained_intron MGP_LPJ_T0027096.1 MGP_LPJ_G0017672.1 mouse_genomes_project 10 121183245 121184523 - Mdm2 protein_coding retained_intron MGP_LPJ_T0027097.1 MGP_LPJ_G0017672.1 mouse_genomes_project 10 121189178 121206413 - Mdm2 protein_coding processed_transcript MGP_LPJ_T0027098.1 MGP_LPJ_G0017672.1 mouse_genomes_project 10 121190285 121207046 - Mdm2 protein_coding processed_transcript MGP_LPJ_T0027099.1 MGP_LPJ_G0017672.1 mouse_genomes_project 10 121197921 121206627 - Mdm2 protein_coding processed_transcript MGP_LPJ_T0027100.1 MGP_LPJ_G0017672.1 mouse_genomes_project 10 121206052 121207049 - Mdm2 protein_coding retained_intron MGP_LPJ_T0024694.1 MGP_LPJ_G0016984.1 mouse_genomes_project 10 20576566 20603913 - MGP_LPJ_P0024694 Tbpl1 protein_coding protein_coding MGP_LPJ_T0024695.1 MGP_LPJ_G0016984.1 mouse_genomes_project 10 20578061 20604404 - MGP_LPJ_P0024695 Tbpl1 protein_coding protein_coding MGP_LPJ_T0024696.1 MGP_LPJ_G0016984.1 mouse_genomes_project 10 20578203 20579066 - Tbpl1 protein_coding processed_transcript MGP_LPJ_T0024697.1 MGP_LPJ_G0016984.1 mouse_genomes_project 10 20584461 20603827 - Tbpl1 protein_coding retained_intron MGP_LPJ_T0027552.1 MGP_LPJ_G0017850.1 mouse_genomes_project 10 134430529 134431486 - MGP_LPJ_P0027552 Olfr818 protein_coding protein_coding MGP_LPJ_T0027553.1 MGP_LPJ_G0017850.1 mouse_genomes_project 10 134430771 134441256 - MGP_LPJ_P0027553 Olfr818 protein_coding protein_coding MGP_LPJ_T0026883.1 MGP_LPJ_G0017595.1 mouse_genomes_project 10 100032037 100033905 + MGP_LPJ_P0026883 Ccer1 protein_coding protein_coding MGP_LPJ_T0009651.1 MGP_LPJ_G0007769.1 mouse_genomes_project 10 131136353 131136437 + Mir26a-2 miRNA miRNA MGP_LPJ_T0026522.1 MGP_LPJ_G0017499.1 mouse_genomes_project 10 84941151 84987141 - MGP_LPJ_P0026522 Aldh1l2 protein_coding protein_coding MGP_LPJ_T0026523.1 MGP_LPJ_G0017499.1 mouse_genomes_project 10 84943909 84946590 - Aldh1l2 protein_coding processed_transcript MGP_LPJ_T0026524.1 MGP_LPJ_G0017499.1 mouse_genomes_project 10 84945312 84948074 - Aldh1l2 protein_coding processed_transcript MGP_LPJ_T0026525.1 MGP_LPJ_G0017499.1 mouse_genomes_project 10 84945314 84987208 - Aldh1l2 protein_coding retained_intron MGP_LPJ_T0026526.1 MGP_LPJ_G0017499.1 mouse_genomes_project 10 84950395 84960376 - Aldh1l2 protein_coding processed_transcript MGP_LPJ_T0026527.1 MGP_LPJ_G0017499.1 mouse_genomes_project 10 84955919 84965976 - Aldh1l2 protein_coding processed_transcript MGP_LPJ_T0025015.1 MGP_LPJ_G0017103.1 mouse_genomes_project 10 41296852 41297762 + Ostm1 protein_coding processed_transcript MGP_LPJ_T0025016.1 MGP_LPJ_G0017103.1 mouse_genomes_project 10 41296865 41434126 + MGP_LPJ_P0025016 Ostm1 protein_coding protein_coding MGP_LPJ_T0025017.1 MGP_LPJ_G0017103.1 mouse_genomes_project 10 41296868 41436287 + MGP_LPJ_P0025017 Ostm1 protein_coding protein_coding MGP_LPJ_T0025018.1 MGP_LPJ_G0017103.1 mouse_genomes_project 10 41412879 41438253 + MGP_LPJ_P0025018 Ostm1 protein_coding protein_coding MGP_LPJ_T0025019.1 MGP_LPJ_G0017103.1 mouse_genomes_project 10 41412929 41435786 + Ostm1 protein_coding retained_intron MGP_LPJ_T0026908.1 MGP_LPJ_G0017608.1 mouse_genomes_project 10 103055931 103069566 - MGP_LPJ_P0026908 4930430F08Rik protein_coding protein_coding MGP_LPJ_T0025769.1 MGP_LPJ_G0017301.1 mouse_genomes_project 10 77502666 77567872 - MGP_LPJ_P0025769 Pcbp3 protein_coding unknown_likely_coding MGP_LPJ_T0025770.1 MGP_LPJ_G0017301.1 mouse_genomes_project 10 77502671 77711561 - MGP_LPJ_P0025770 Pcbp3 protein_coding protein_coding MGP_LPJ_T0025771.1 MGP_LPJ_G0017301.1 mouse_genomes_project 10 77502672 77563591 - Pcbp3 protein_coding processed_transcript MGP_LPJ_T0025772.1 MGP_LPJ_G0017301.1 mouse_genomes_project 10 77502672 77566663 - MGP_LPJ_P0025772 Pcbp3 protein_coding protein_coding MGP_LPJ_T0025773.1 MGP_LPJ_G0017301.1 mouse_genomes_project 10 77502674 77711660 - MGP_LPJ_P0025773 Pcbp3 protein_coding protein_coding MGP_LPJ_T0025774.1 MGP_LPJ_G0017301.1 mouse_genomes_project 10 77503046 77538669 - Pcbp3 protein_coding processed_transcript MGP_LPJ_T0025775.1 MGP_LPJ_G0017301.1 mouse_genomes_project 10 77503184 77529227 - MGP_LPJ_P0025775 Pcbp3 protein_coding protein_coding MGP_LPJ_T0025776.1 MGP_LPJ_G0017301.1 mouse_genomes_project 10 77504119 77557505 - MGP_LPJ_P0025776 Pcbp3 protein_coding nonsense_mediated_decay MGP_LPJ_T0025777.1 MGP_LPJ_G0017301.1 mouse_genomes_project 10 77530607 77654771 - Pcbp3 protein_coding processed_transcript MGP_LPJ_T0025778.1 MGP_LPJ_G0017301.1 mouse_genomes_project 10 77538652 77560201 - Pcbp3 protein_coding processed_transcript MGP_LPJ_T0024711.1 MGP_LPJ_G0016992.1 mouse_genomes_project 10 21858931 21861943 + MGP_LPJ_P0024711 Taar2 protein_coding protein_coding MGP_LPJ_T0097969.1 MGP_LPJ_G0036250.1 mouse_genomes_project 10 70669770 70672396 - pseudogene pseudogene MGP_LPJ_T0012427.1 MGP_LPJ_G0010518.1 mouse_genomes_project 10 82086413 82086670 - processed_pseudogene processed_pseudogene MGP_LPJ_T0027227.1 MGP_LPJ_G0017714.1 mouse_genomes_project 10 131195345 131200065 + MGP_LPJ_P0027227 Cyp27b1 protein_coding protein_coding MGP_LPJ_T0027228.1 MGP_LPJ_G0017714.1 mouse_genomes_project 10 131195345 131200102 + MGP_LPJ_P0027228 Cyp27b1 protein_coding nonsense_mediated_decay MGP_LPJ_T0027229.1 MGP_LPJ_G0017714.1 mouse_genomes_project 10 131195766 131196962 + Cyp27b1 protein_coding processed_transcript MGP_LPJ_T0026346.1 MGP_LPJ_G0017461.1 mouse_genomes_project 10 82450872 82479577 + MGP_LPJ_P0026346 Pip5k1c protein_coding protein_coding MGP_LPJ_T0026347.1 MGP_LPJ_G0017461.1 mouse_genomes_project 10 82450889 82477859 + MGP_LPJ_P0026347 Pip5k1c protein_coding protein_coding MGP_LPJ_T0026348.1 MGP_LPJ_G0017461.1 mouse_genomes_project 10 82450897 82468735 + MGP_LPJ_P0026348 Pip5k1c protein_coding nonsense_mediated_decay MGP_LPJ_T0026349.1 MGP_LPJ_G0017461.1 mouse_genomes_project 10 82450913 82479577 + MGP_LPJ_P0026349 Pip5k1c protein_coding nonsense_mediated_decay MGP_LPJ_T0026350.1 MGP_LPJ_G0017461.1 mouse_genomes_project 10 82450914 82479578 + MGP_LPJ_P0026350 Pip5k1c protein_coding protein_coding MGP_LPJ_T0026351.1 MGP_LPJ_G0017461.1 mouse_genomes_project 10 82470292 82473045 + MGP_LPJ_P0026351 Pip5k1c protein_coding protein_coding MGP_LPJ_T0026352.1 MGP_LPJ_G0017461.1 mouse_genomes_project 10 82472967 82477750 + MGP_LPJ_P0026352 Pip5k1c protein_coding nonsense_mediated_decay MGP_LPJ_T0026353.1 MGP_LPJ_G0017461.1 mouse_genomes_project 10 82473102 82477625 + MGP_LPJ_P0026353 Pip5k1c protein_coding nonsense_mediated_decay MGP_LPJ_T0026354.1 MGP_LPJ_G0017461.1 mouse_genomes_project 10 82473592 82475387 + Pip5k1c protein_coding retained_intron MGP_LPJ_T0026355.1 MGP_LPJ_G0017461.1 mouse_genomes_project 10 82476446 82477618 + Pip5k1c protein_coding retained_intron MGP_LPJ_T0024817.1 MGP_LPJ_G0017037.1 mouse_genomes_project 10 29552587 29568120 + MGP_LPJ_P0024817 Hddc2 protein_coding protein_coding MGP_LPJ_T0024818.1 MGP_LPJ_G0017037.1 mouse_genomes_project 10 29552610 29556238 + Hddc2 protein_coding retained_intron MGP_LPJ_T0024819.1 MGP_LPJ_G0017037.1 mouse_genomes_project 10 29552612 29557049 + Hddc2 protein_coding retained_intron MGP_LPJ_T0024820.1 MGP_LPJ_G0017037.1 mouse_genomes_project 10 29552677 29568100 + MGP_LPJ_P0024820 Hddc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0024821.1 MGP_LPJ_G0017037.1 mouse_genomes_project 10 29559356 29568118 + Hddc2 protein_coding retained_intron MGP_LPJ_T0024361.1 MGP_LPJ_G0016901.1 mouse_genomes_project 10 2650470 2658868 + MGP_LPJ_P0024361 Vip protein_coding protein_coding MGP_LPJ_T0012444.1 MGP_LPJ_G0010535.1 mouse_genomes_project 10 134621562 134622533 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098827.1 MGP_LPJ_G0037090.1 mouse_genomes_project 10 27498819 27498926 + Gm25596 snRNA snRNA MGP_LPJ_T0026269.1 MGP_LPJ_G0017440.1 mouse_genomes_project 10 82024159 82042183 - MGP_LPJ_P0026269 Lmnb2 protein_coding protein_coding MGP_LPJ_T0026270.1 MGP_LPJ_G0017440.1 mouse_genomes_project 10 82025599 82029214 - MGP_LPJ_P0026270 Lmnb2 protein_coding protein_coding MGP_LPJ_T0026271.1 MGP_LPJ_G0017440.1 mouse_genomes_project 10 82033909 82041816 - Lmnb2 protein_coding processed_transcript MGP_LPJ_T0024688.1 MGP_LPJ_G0016982.1 mouse_genomes_project 10 20087677 20098178 + MGP_LPJ_P0024688 protein_coding protein_coding MGP_LPJ_T0024689.1 MGP_LPJ_G0016982.1 mouse_genomes_project 10 20087996 20098178 + MGP_LPJ_P0024689 protein_coding protein_coding MGP_LPJ_T0024364.1 MGP_LPJ_G0016903.1 mouse_genomes_project 10 2830583 2842869 - MGP_LPJ_P0024364 Mtrf1l protein_coding protein_coding MGP_LPJ_T0024365.1 MGP_LPJ_G0016903.1 mouse_genomes_project 10 2831915 2834499 - Mtrf1l protein_coding processed_transcript MGP_LPJ_T0024366.1 MGP_LPJ_G0016903.1 mouse_genomes_project 10 2837995 2842505 - Mtrf1l protein_coding processed_transcript MGP_LPJ_T0026967.1 MGP_LPJ_G0017628.1 mouse_genomes_project 10 111379804 111921096 - MGP_LPJ_P0026967 Syt1 protein_coding protein_coding MGP_LPJ_T0026968.1 MGP_LPJ_G0017628.1 mouse_genomes_project 10 111379808 111921103 - MGP_LPJ_P0026968 Syt1 protein_coding protein_coding MGP_LPJ_T0026969.1 MGP_LPJ_G0017628.1 mouse_genomes_project 10 111517654 111526310 - Syt1 protein_coding retained_intron MGP_LPJ_T0026970.1 MGP_LPJ_G0017628.1 mouse_genomes_project 10 111517710 111919230 - MGP_LPJ_P0026970 Syt1 protein_coding protein_coding MGP_LPJ_T0026971.1 MGP_LPJ_G0017628.1 mouse_genomes_project 10 111805439 111921083 - Syt1 protein_coding retained_intron MGP_LPJ_T0026972.1 MGP_LPJ_G0017628.1 mouse_genomes_project 10 111805656 111919219 - Syt1 protein_coding retained_intron MGP_LPJ_T0026272.1 MGP_LPJ_G0017441.1 mouse_genomes_project 10 82056017 82064162 + MGP_LPJ_P0026272 Gadd45b protein_coding protein_coding MGP_LPJ_T0000854.1 MGP_LPJ_G0000784.1 mouse_genomes_project 10 77733525 77734203 - TEC TEC MGP_LPJ_T0006097.1 MGP_LPJ_G0005104.1 mouse_genomes_project 10 14353747 14507286 - Gm20125 lincRNA lincRNA MGP_LPJ_T0006119.1 MGP_LPJ_G0005123.1 mouse_genomes_project 10 63212730 63216172 - Gm26789 lincRNA lincRNA MGP_LPJ_T0025137.1 MGP_LPJ_G0017149.1 mouse_genomes_project 10 56156490 56159611 + MGP_LPJ_P0025137 Gm9956 protein_coding protein_coding MGP_LPJ_T0006188.1 MGP_LPJ_G0005166.1 mouse_genomes_project 10 133003020 133006510 + Gm26876 lincRNA lincRNA MGP_LPJ_T0027466.1 MGP_LPJ_G0017795.1 mouse_genomes_project 10 133167705 133172040 - MGP_LPJ_P0027466 Tmem198b protein_coding protein_coding MGP_LPJ_T0027467.1 MGP_LPJ_G0017795.1 mouse_genomes_project 10 133167774 133171631 - MGP_LPJ_P0027467 Tmem198b protein_coding nonsense_mediated_decay MGP_LPJ_T0027468.1 MGP_LPJ_G0017795.1 mouse_genomes_project 10 133168510 133171387 - MGP_LPJ_P0027468 Tmem198b protein_coding nonsense_mediated_decay MGP_LPJ_T0027445.1 MGP_LPJ_G0017784.1 mouse_genomes_project 10 132898235 132906390 - MGP_LPJ_P0027445 Pa2g4 protein_coding protein_coding MGP_LPJ_T0027446.1 MGP_LPJ_G0017784.1 mouse_genomes_project 10 132899906 132906283 - MGP_LPJ_P0027446 Pa2g4 protein_coding protein_coding MGP_LPJ_T0027447.1 MGP_LPJ_G0017784.1 mouse_genomes_project 10 132903606 132906325 - Pa2g4 protein_coding retained_intron MGP_LPJ_T0024608.1 MGP_LPJ_G0016955.1 mouse_genomes_project 10 16040859 16046782 - MGP_LPJ_P0024608 Hebp2 protein_coding protein_coding MGP_LPJ_T0024993.1 MGP_LPJ_G0017098.1 mouse_genomes_project 10 40577786 40687439 - MGP_LPJ_P0024993 protein_coding protein_coding MGP_LPJ_T0024994.1 MGP_LPJ_G0017098.1 mouse_genomes_project 10 40577789 40643459 - protein_coding retained_intron MGP_LPJ_T0024995.1 MGP_LPJ_G0017098.1 mouse_genomes_project 10 40577796 40687390 - MGP_LPJ_P0024995 protein_coding protein_coding MGP_LPJ_T0024996.1 MGP_LPJ_G0017098.1 mouse_genomes_project 10 40578831 40642837 - protein_coding retained_intron MGP_LPJ_T0024997.1 MGP_LPJ_G0017098.1 mouse_genomes_project 10 40579589 40687445 - MGP_LPJ_P0024997 protein_coding nonsense_mediated_decay MGP_LPJ_T0024998.1 MGP_LPJ_G0017098.1 mouse_genomes_project 10 40653331 40659835 - MGP_LPJ_P0024998 protein_coding protein_coding MGP_LPJ_T0024999.1 MGP_LPJ_G0017098.1 mouse_genomes_project 10 40668853 40687388 - MGP_LPJ_P0024999 protein_coding protein_coding MGP_LPJ_T0025000.1 MGP_LPJ_G0017098.1 mouse_genomes_project 10 40669393 40687390 - MGP_LPJ_P0025000 protein_coding protein_coding MGP_LPJ_T0027417.1 MGP_LPJ_G0017776.1 mouse_genomes_project 10 132727701 132736780 - MGP_LPJ_P0027417 Nabp2 protein_coding protein_coding MGP_LPJ_T0027418.1 MGP_LPJ_G0017776.1 mouse_genomes_project 10 132727701 132736926 - MGP_LPJ_P0027418 Nabp2 protein_coding protein_coding MGP_LPJ_T0027419.1 MGP_LPJ_G0017776.1 mouse_genomes_project 10 132727780 132736774 - MGP_LPJ_P0027419 Nabp2 protein_coding protein_coding MGP_LPJ_T0027420.1 MGP_LPJ_G0017776.1 mouse_genomes_project 10 132727896 132735895 - Nabp2 protein_coding retained_intron MGP_LPJ_T0027421.1 MGP_LPJ_G0017776.1 mouse_genomes_project 10 132728206 132736684 - MGP_LPJ_P0027421 Nabp2 protein_coding protein_coding MGP_LPJ_T0027422.1 MGP_LPJ_G0017776.1 mouse_genomes_project 10 132728216 132737603 - MGP_LPJ_P0027422 Nabp2 protein_coding protein_coding MGP_LPJ_T0027423.1 MGP_LPJ_G0017776.1 mouse_genomes_project 10 132735214 132736232 - MGP_LPJ_P0027423 Nabp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0027424.1 MGP_LPJ_G0017776.1 mouse_genomes_project 10 132735770 132738544 - MGP_LPJ_P0027424 Nabp2 protein_coding protein_coding MGP_LPJ_T0027425.1 MGP_LPJ_G0017776.1 mouse_genomes_project 10 132735798 132736788 - MGP_LPJ_P0027425 Nabp2 protein_coding protein_coding MGP_LPJ_T0026528.1 MGP_LPJ_G0017500.1 mouse_genomes_project 10 84997067 85052284 + MGP_LPJ_P0026528 A230046K03Rik protein_coding protein_coding MGP_LPJ_T0026529.1 MGP_LPJ_G0017500.1 mouse_genomes_project 10 84997168 85049122 + MGP_LPJ_P0026529 A230046K03Rik protein_coding unknown_likely_coding MGP_LPJ_T0026513.1 MGP_LPJ_G0017494.1 mouse_genomes_project 10 84263906 84305988 + MGP_LPJ_P0026513 protein_coding protein_coding MGP_LPJ_T0101752.1 MGP_LPJ_G0039790.1 mouse_genomes_project 10 133951438 133952330 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0027353.1 MGP_LPJ_G0017756.1 mouse_genomes_project 10 132301755 132318374 + MGP_LPJ_P0027353 Prim1 protein_coding protein_coding MGP_LPJ_T0027354.1 MGP_LPJ_G0017756.1 mouse_genomes_project 10 132301759 132318428 + MGP_LPJ_P0027354 Prim1 protein_coding protein_coding MGP_LPJ_T0027355.1 MGP_LPJ_G0017756.1 mouse_genomes_project 10 132301783 132318256 + Prim1 protein_coding retained_intron MGP_LPJ_T0027356.1 MGP_LPJ_G0017756.1 mouse_genomes_project 10 132306286 132308452 + Prim1 protein_coding retained_intron MGP_LPJ_T0027357.1 MGP_LPJ_G0017756.1 mouse_genomes_project 10 132315077 132318424 + Prim1 protein_coding retained_intron MGP_LPJ_T0027534.1 MGP_LPJ_G0017836.1 mouse_genomes_project 10 134105580 134106507 - MGP_LPJ_P0027534 Olfr803 protein_coding protein_coding MGP_LPJ_T0101475.1 MGP_LPJ_G0039624.1 mouse_genomes_project 10 132007147 132110246 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101476.1 MGP_LPJ_G0039624.1 mouse_genomes_project 10 132007147 132110241 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0027307.1 MGP_LPJ_G0017739.1 mouse_genomes_project 10 131731108 131818469 - MGP_LPJ_P0027307 Lrp1 protein_coding protein_coding MGP_LPJ_T0027308.1 MGP_LPJ_G0017739.1 mouse_genomes_project 10 131731546 131732545 - Lrp1 protein_coding retained_intron MGP_LPJ_T0027309.1 MGP_LPJ_G0017739.1 mouse_genomes_project 10 131732182 131733090 - Lrp1 protein_coding retained_intron MGP_LPJ_T0027310.1 MGP_LPJ_G0017739.1 mouse_genomes_project 10 131735143 131736156 - Lrp1 protein_coding retained_intron MGP_LPJ_T0027311.1 MGP_LPJ_G0017739.1 mouse_genomes_project 10 131739342 131742865 - MGP_LPJ_P0027311 Lrp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0027312.1 MGP_LPJ_G0017739.1 mouse_genomes_project 10 131773107 131776664 - Lrp1 protein_coding retained_intron MGP_LPJ_T0027313.1 MGP_LPJ_G0017739.1 mouse_genomes_project 10 131776507 131778239 - MGP_LPJ_P0027313 Lrp1 protein_coding protein_coding MGP_LPJ_T0027314.1 MGP_LPJ_G0017739.1 mouse_genomes_project 10 131782379 131818469 - Lrp1 protein_coding retained_intron MGP_LPJ_T0027315.1 MGP_LPJ_G0017739.1 mouse_genomes_project 10 131783908 131818291 - MGP_LPJ_P0027315 Lrp1 protein_coding protein_coding MGP_LPJ_T0027316.1 MGP_LPJ_G0017739.1 mouse_genomes_project 10 131795511 131818243 - MGP_LPJ_P0027316 Lrp1 protein_coding protein_coding MGP_LPJ_T0025092.1 MGP_LPJ_G0017129.1 mouse_genomes_project 10 50789854 50806263 - MGP_LPJ_P0025092 Gprc6a protein_coding protein_coding MGP_LPJ_T0009616.1 MGP_LPJ_G0007734.1 mouse_genomes_project 10 81348714 81348783 + Mir6911 miRNA miRNA MGP_LPJ_T0003091.1 MGP_LPJ_G0002885.1 mouse_genomes_project 10 87642640 87644529 - A230060F14Rik antisense antisense MGP_LPJ_T0003092.1 MGP_LPJ_G0002885.1 mouse_genomes_project 10 87643979 87644525 - A230060F14Rik antisense antisense MGP_LPJ_T0027532.1 MGP_LPJ_G0017835.1 mouse_genomes_project 10 134095871 134097007 - MGP_LPJ_P0027532 Olfr802 protein_coding protein_coding MGP_LPJ_T0027533.1 MGP_LPJ_G0017835.1 mouse_genomes_project 10 134095871 134100895 - MGP_LPJ_P0027533 Olfr802 protein_coding protein_coding MGP_LPJ_T0026481.1 MGP_LPJ_G0017486.1 mouse_genomes_project 10 83436539 83462777 + MGP_LPJ_P0026481 AU041133 protein_coding protein_coding MGP_LPJ_T0026482.1 MGP_LPJ_G0017486.1 mouse_genomes_project 10 83446787 83461723 + MGP_LPJ_P0026482 AU041133 protein_coding protein_coding MGP_LPJ_T0024816.1 MGP_LPJ_G0017036.1 mouse_genomes_project 10 29477695 29480601 + MGP_LPJ_P0024816 Gm5422 protein_coding protein_coding MGP_LPJ_T0027250.1 MGP_LPJ_G0017723.1 mouse_genomes_project 10 131344240 131350291 - MGP_LPJ_P0027250 Dtx3 protein_coding protein_coding MGP_LPJ_T0027251.1 MGP_LPJ_G0017723.1 mouse_genomes_project 10 131344240 131350291 - MGP_LPJ_P0027251 Dtx3 protein_coding protein_coding MGP_LPJ_T0027252.1 MGP_LPJ_G0017723.1 mouse_genomes_project 10 131344503 131350309 - MGP_LPJ_P0027252 Dtx3 protein_coding protein_coding MGP_LPJ_T0027253.1 MGP_LPJ_G0017723.1 mouse_genomes_project 10 131344686 131349048 - MGP_LPJ_P0027253 Dtx3 protein_coding protein_coding MGP_LPJ_T0027254.1 MGP_LPJ_G0017723.1 mouse_genomes_project 10 131347670 131350310 - MGP_LPJ_P0027254 Dtx3 protein_coding protein_coding MGP_LPJ_T0027255.1 MGP_LPJ_G0017723.1 mouse_genomes_project 10 131348199 131350301 - Dtx3 protein_coding retained_intron MGP_LPJ_T0026140.1 MGP_LPJ_G0017403.1 mouse_genomes_project 10 81328131 81330993 - MGP_LPJ_P0026140 Gamt protein_coding protein_coding MGP_LPJ_T0026141.1 MGP_LPJ_G0017403.1 mouse_genomes_project 10 81328144 81330949 - MGP_LPJ_P0026141 Gamt protein_coding protein_coding MGP_LPJ_T0026142.1 MGP_LPJ_G0017403.1 mouse_genomes_project 10 81328557 81330899 - Gamt protein_coding retained_intron MGP_LPJ_T0026143.1 MGP_LPJ_G0017403.1 mouse_genomes_project 10 81328773 81329270 - Gamt protein_coding retained_intron MGP_LPJ_T0025956.1 MGP_LPJ_G0017359.1 mouse_genomes_project 10 80619425 80628289 - MGP_LPJ_P0025956 C2cd4c protein_coding protein_coding MGP_LPJ_T0025957.1 MGP_LPJ_G0017359.1 mouse_genomes_project 10 80619425 80628282 - MGP_LPJ_P0025957 C2cd4c protein_coding protein_coding MGP_LPJ_T0027404.1 MGP_LPJ_G0017768.1 mouse_genomes_project 10 132583287 132610861 + MGP_LPJ_P0027404 Stat2 protein_coding protein_coding MGP_LPJ_T0027405.1 MGP_LPJ_G0017768.1 mouse_genomes_project 10 132583287 132610861 + MGP_LPJ_P0027405 Stat2 protein_coding protein_coding MGP_LPJ_T0026160.1 MGP_LPJ_G0017408.1 mouse_genomes_project 10 81392407 81400341 - Pcsk4 protein_coding retained_intron MGP_LPJ_T0026161.1 MGP_LPJ_G0017408.1 mouse_genomes_project 10 81392407 81400343 - MGP_LPJ_P0026161 Pcsk4 protein_coding nonsense_mediated_decay MGP_LPJ_T0026162.1 MGP_LPJ_G0017408.1 mouse_genomes_project 10 81392407 81400386 - MGP_LPJ_P0026162 Pcsk4 protein_coding protein_coding MGP_LPJ_T0026163.1 MGP_LPJ_G0017408.1 mouse_genomes_project 10 81392411 81394252 - Pcsk4 protein_coding retained_intron MGP_LPJ_T0026164.1 MGP_LPJ_G0017408.1 mouse_genomes_project 10 81392411 81394251 - Pcsk4 protein_coding retained_intron MGP_LPJ_T0026165.1 MGP_LPJ_G0017408.1 mouse_genomes_project 10 81393246 81400287 - MGP_LPJ_P0026165 Pcsk4 protein_coding nonsense_mediated_decay MGP_LPJ_T0025295.1 MGP_LPJ_G0017193.1 mouse_genomes_project 10 61164788 61195313 - MGP_LPJ_P0025295 Eif4ebp2 protein_coding protein_coding MGP_LPJ_T0025296.1 MGP_LPJ_G0017193.1 mouse_genomes_project 10 61173970 61195302 - MGP_LPJ_P0025296 Eif4ebp2 protein_coding protein_coding MGP_LPJ_T0009624.1 MGP_LPJ_G0007742.1 mouse_genomes_project 10 82677850 82677947 + Gm25595 miRNA miRNA MGP_LPJ_T0027525.1 MGP_LPJ_G0017832.1 mouse_genomes_project 10 134068534 134069470 + MGP_LPJ_P0027525 Olfr800 protein_coding protein_coding MGP_LPJ_T0000869.1 MGP_LPJ_G0000798.1 mouse_genomes_project 10 122455319 122458014 + TEC TEC MGP_LPJ_T0009630.1 MGP_LPJ_G0007748.1 mouse_genomes_project 10 94569550 94569644 + Gm22582 miRNA miRNA MGP_LPJ_T0025748.1 MGP_LPJ_G0017294.1 mouse_genomes_project 10 77198756 77209414 - MGP_LPJ_P0025748 Ybey protein_coding protein_coding MGP_LPJ_T0026558.1 MGP_LPJ_G0017508.1 mouse_genomes_project 10 86440108 86540500 + MGP_LPJ_P0026558 Ric8b protein_coding protein_coding MGP_LPJ_T0026559.1 MGP_LPJ_G0017508.1 mouse_genomes_project 10 86440148 86540500 + MGP_LPJ_P0026559 Ric8b protein_coding protein_coding MGP_LPJ_T0027415.1 MGP_LPJ_G0017775.1 mouse_genomes_project 10 132722241 132727531 - MGP_LPJ_P0027415 Slc39a5 protein_coding protein_coding MGP_LPJ_T0027416.1 MGP_LPJ_G0017775.1 mouse_genomes_project 10 132722241 132726771 - MGP_LPJ_P0027416 Slc39a5 protein_coding protein_coding MGP_LPJ_T0025779.1 MGP_LPJ_G0017302.1 mouse_genomes_project 10 77763382 77773058 + MGP_LPJ_P0025779 Gm10787 protein_coding protein_coding MGP_LPJ_T0009623.1 MGP_LPJ_G0007741.1 mouse_genomes_project 10 82580391 82580449 - Mir1191b miRNA miRNA MGP_LPJ_T0024857.1 MGP_LPJ_G0017059.1 mouse_genomes_project 10 34898508 35232089 + MGP_LPJ_P0024857 Hs3st5 protein_coding protein_coding MGP_LPJ_T0024858.1 MGP_LPJ_G0017059.1 mouse_genomes_project 10 34898513 35232705 + MGP_LPJ_P0024858 Hs3st5 protein_coding protein_coding MGP_LPJ_T0024859.1 MGP_LPJ_G0017059.1 mouse_genomes_project 10 34898583 35097446 + Hs3st5 protein_coding retained_intron MGP_LPJ_T0024860.1 MGP_LPJ_G0017059.1 mouse_genomes_project 10 34898720 35232713 + MGP_LPJ_P0024860 Hs3st5 protein_coding protein_coding MGP_LPJ_T0024861.1 MGP_LPJ_G0017059.1 mouse_genomes_project 10 34899101 35208184 + Hs3st5 protein_coding processed_transcript MGP_LPJ_T0024970.1 MGP_LPJ_G0017093.1 mouse_genomes_project 10 40178074 40192068 - protein_coding processed_transcript MGP_LPJ_T0024971.1 MGP_LPJ_G0017093.1 mouse_genomes_project 10 40178077 40245635 - MGP_LPJ_P0024971 protein_coding protein_coding MGP_LPJ_T0024972.1 MGP_LPJ_G0017093.1 mouse_genomes_project 10 40178077 40227022 - MGP_LPJ_P0024972 protein_coding protein_coding MGP_LPJ_T0024973.1 MGP_LPJ_G0017093.1 mouse_genomes_project 10 40178520 40368509 - MGP_LPJ_P0024973 protein_coding unknown_likely_coding MGP_LPJ_T0024974.1 MGP_LPJ_G0017093.1 mouse_genomes_project 10 40178639 40218482 - MGP_LPJ_P0024974 protein_coding protein_coding MGP_LPJ_T0024975.1 MGP_LPJ_G0017093.1 mouse_genomes_project 10 40188146 40199907 - protein_coding retained_intron MGP_LPJ_T0024976.1 MGP_LPJ_G0017093.1 mouse_genomes_project 10 40189826 40367862 - MGP_LPJ_P0024976 protein_coding protein_coding MGP_LPJ_T0024977.1 MGP_LPJ_G0017093.1 mouse_genomes_project 10 40189945 40192636 - protein_coding retained_intron MGP_LPJ_T0024978.1 MGP_LPJ_G0017093.1 mouse_genomes_project 10 40219500 40227313 - protein_coding processed_transcript MGP_LPJ_T0027491.1 MGP_LPJ_G0017807.1 mouse_genomes_project 10 133486425 133487704 - MGP_LPJ_P0027491 Olfr765 protein_coding protein_coding MGP_LPJ_T0024760.1 MGP_LPJ_G0017015.1 mouse_genomes_project 10 23545453 23553777 - MGP_LPJ_P0024760 Smlr1 protein_coding protein_coding MGP_LPJ_T0024761.1 MGP_LPJ_G0017015.1 mouse_genomes_project 10 23549761 23553652 - Smlr1 protein_coding retained_intron MGP_LPJ_T0024964.1 MGP_LPJ_G0017091.1 mouse_genomes_project 10 40120361 40151674 + MGP_LPJ_P0024964 Ppil6 protein_coding protein_coding MGP_LPJ_T0024965.1 MGP_LPJ_G0017091.1 mouse_genomes_project 10 40134377 40151592 + MGP_LPJ_P0024965 Ppil6 protein_coding unknown_likely_coding MGP_LPJ_T0026293.1 MGP_LPJ_G0017447.1 mouse_genomes_project 10 82213352 82230009 - MGP_LPJ_P0026293 Creb3l3 protein_coding protein_coding MGP_LPJ_T0026294.1 MGP_LPJ_G0017447.1 mouse_genomes_project 10 82221078 82223711 - Creb3l3 protein_coding retained_intron MGP_LPJ_T0026295.1 MGP_LPJ_G0017447.1 mouse_genomes_project 10 82221758 82223042 - Creb3l3 protein_coding retained_intron MGP_LPJ_T0026296.1 MGP_LPJ_G0017447.1 mouse_genomes_project 10 82223766 82229889 - Creb3l3 protein_coding processed_transcript MGP_LPJ_T0012431.1 MGP_LPJ_G0010522.1 mouse_genomes_project 10 98660817 98661006 - processed_pseudogene processed_pseudogene MGP_LPJ_T0025179.1 MGP_LPJ_G0017162.1 mouse_genomes_project 10 58100627 58175892 - MGP_LPJ_P0025179 Edar protein_coding protein_coding MGP_LPJ_T0026273.1 MGP_LPJ_G0017442.1 mouse_genomes_project 10 82080583 82143696 - MGP_LPJ_P0026273 Gng7 protein_coding protein_coding MGP_LPJ_T0026274.1 MGP_LPJ_G0017442.1 mouse_genomes_project 10 82080583 82130133 - MGP_LPJ_P0026274 Gng7 protein_coding protein_coding MGP_LPJ_T0026275.1 MGP_LPJ_G0017442.1 mouse_genomes_project 10 82080583 82143676 - MGP_LPJ_P0026275 Gng7 protein_coding protein_coding MGP_LPJ_T0026276.1 MGP_LPJ_G0017442.1 mouse_genomes_project 10 82080588 82130146 - MGP_LPJ_P0026276 Gng7 protein_coding protein_coding MGP_LPJ_T0026277.1 MGP_LPJ_G0017442.1 mouse_genomes_project 10 82083146 82126968 - MGP_LPJ_P0026277 Gng7 protein_coding protein_coding MGP_LPJ_T0026278.1 MGP_LPJ_G0017442.1 mouse_genomes_project 10 82083671 82143664 - MGP_LPJ_P0026278 Gng7 protein_coding protein_coding MGP_LPJ_T0012395.1 MGP_LPJ_G0010486.1 mouse_genomes_project 10 23857719 23858285 - processed_pseudogene processed_pseudogene MGP_LPJ_T0025443.1 MGP_LPJ_G0017232.1 mouse_genomes_project 10 67147527 67241291 - MGP_LPJ_P0025443 Reep3 protein_coding protein_coding MGP_LPJ_T0026178.1 MGP_LPJ_G0017411.1 mouse_genomes_project 10 81429248 81438263 + MGP_LPJ_P0026178 Plk5 protein_coding protein_coding MGP_LPJ_T0026179.1 MGP_LPJ_G0017411.1 mouse_genomes_project 10 81429248 81438263 + MGP_LPJ_P0026179 Plk5 protein_coding protein_coding MGP_LPJ_T0026180.1 MGP_LPJ_G0017411.1 mouse_genomes_project 10 81430766 81433258 + Plk5 protein_coding retained_intron MGP_LPJ_T0026181.1 MGP_LPJ_G0017411.1 mouse_genomes_project 10 81432000 81433516 + Plk5 protein_coding retained_intron MGP_LPJ_T0026979.1 MGP_LPJ_G0017630.1 mouse_genomes_project 10 113737912 113740588 + E2f7 protein_coding processed_transcript MGP_LPJ_T0026980.1 MGP_LPJ_G0017630.1 mouse_genomes_project 10 113737938 113748988 + MGP_LPJ_P0026980 E2f7 protein_coding protein_coding MGP_LPJ_T0026981.1 MGP_LPJ_G0017630.1 mouse_genomes_project 10 113737941 113760504 + E2f7 protein_coding retained_intron MGP_LPJ_T0026982.1 MGP_LPJ_G0017630.1 mouse_genomes_project 10 113737941 113786632 + MGP_LPJ_P0026982 E2f7 protein_coding protein_coding MGP_LPJ_T0026983.1 MGP_LPJ_G0017630.1 mouse_genomes_project 10 113737986 113784758 + MGP_LPJ_P0026983 E2f7 protein_coding protein_coding MGP_LPJ_T0026984.1 MGP_LPJ_G0017630.1 mouse_genomes_project 10 113738045 113746928 + MGP_LPJ_P0026984 E2f7 protein_coding protein_coding MGP_LPJ_T0026985.1 MGP_LPJ_G0017630.1 mouse_genomes_project 10 113746612 113748598 + E2f7 protein_coding processed_transcript MGP_LPJ_T0026986.1 MGP_LPJ_G0017630.1 mouse_genomes_project 10 113746682 113767017 + MGP_LPJ_P0026986 E2f7 protein_coding nonsense_mediated_decay MGP_LPJ_T0026987.1 MGP_LPJ_G0017630.1 mouse_genomes_project 10 113756220 113758119 + E2f7 protein_coding retained_intron MGP_LPJ_T0027547.1 MGP_LPJ_G0017845.1 mouse_genomes_project 10 134294681 134295539 + MGP_LPJ_P0027547 protein_coding protein_coding MGP_LPJ_T0101748.1 MGP_LPJ_G0039786.1 mouse_genomes_project 10 109268958 109269424 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0012434.1 MGP_LPJ_G0010525.1 mouse_genomes_project 10 106257634 106258630 - processed_pseudogene processed_pseudogene MGP_LPJ_T0026476.1 MGP_LPJ_G0017483.1 mouse_genomes_project 10 83256915 83270001 + MGP_LPJ_P0026476 Zfp873 protein_coding unknown_likely_coding MGP_LPJ_T0026477.1 MGP_LPJ_G0017483.1 mouse_genomes_project 10 83267120 83270001 + MGP_LPJ_P0026477 Zfp873 protein_coding protein_coding MGP_LPJ_T0027472.1 MGP_LPJ_G0017799.1 mouse_genomes_project 10 133257399 133266809 - MGP_LPJ_P0027472 Gdf11 protein_coding protein_coding MGP_LPJ_T0025920.1 MGP_LPJ_G0017344.1 mouse_genomes_project 10 79701327 79729784 + MGP_LPJ_P0025920 Slc1a6 protein_coding protein_coding MGP_LPJ_T0026882.1 MGP_LPJ_G0017594.1 mouse_genomes_project 10 100013827 100014142 - MGP_LPJ_P0026882 Gm10754 protein_coding protein_coding MGP_LPJ_T0026374.1 MGP_LPJ_G0017467.1 mouse_genomes_project 10 82524497 82526285 - MGP_LPJ_P0026374 4930404N11Rik protein_coding protein_coding MGP_LPJ_T0026375.1 MGP_LPJ_G0017467.1 mouse_genomes_project 10 82525353 82526307 - 4930404N11Rik protein_coding retained_intron MGP_LPJ_T0026376.1 MGP_LPJ_G0017467.1 mouse_genomes_project 10 82525454 82527247 - MGP_LPJ_P0026376 4930404N11Rik protein_coding protein_coding MGP_LPJ_T0026377.1 MGP_LPJ_G0017467.1 mouse_genomes_project 10 82525477 82527221 - 4930404N11Rik protein_coding retained_intron MGP_LPJ_T0024981.1 MGP_LPJ_G0017096.1 mouse_genomes_project 10 40378365 40470671 - MGP_LPJ_P0024981 Cep57l1 protein_coding protein_coding MGP_LPJ_T0024982.1 MGP_LPJ_G0017096.1 mouse_genomes_project 10 40378370 40470665 - MGP_LPJ_P0024982 Cep57l1 protein_coding protein_coding MGP_LPJ_T0024983.1 MGP_LPJ_G0017096.1 mouse_genomes_project 10 40378370 40470665 - MGP_LPJ_P0024983 Cep57l1 protein_coding protein_coding MGP_LPJ_T0024984.1 MGP_LPJ_G0017096.1 mouse_genomes_project 10 40379219 40470705 - MGP_LPJ_P0024984 Cep57l1 protein_coding protein_coding MGP_LPJ_T0024985.1 MGP_LPJ_G0017096.1 mouse_genomes_project 10 40379371 40470680 - MGP_LPJ_P0024985 Cep57l1 protein_coding protein_coding MGP_LPJ_T0024986.1 MGP_LPJ_G0017096.1 mouse_genomes_project 10 40380691 40382415 - MGP_LPJ_P0024986 Cep57l1 protein_coding protein_coding MGP_LPJ_T0024987.1 MGP_LPJ_G0017096.1 mouse_genomes_project 10 40385060 40388443 - Cep57l1 protein_coding retained_intron MGP_LPJ_T0024988.1 MGP_LPJ_G0017096.1 mouse_genomes_project 10 40388023 40409120 - Cep57l1 protein_coding retained_intron MGP_LPJ_T0024989.1 MGP_LPJ_G0017096.1 mouse_genomes_project 10 40405190 40470670 - Cep57l1 protein_coding retained_intron MGP_LPJ_T0024990.1 MGP_LPJ_G0017096.1 mouse_genomes_project 10 40407222 40470688 - Cep57l1 protein_coding retained_intron MGP_LPJ_T0026629.1 MGP_LPJ_G0017533.1 mouse_genomes_project 10 89236283 89306010 + MGP_LPJ_P0026629 Pah protein_coding protein_coding MGP_LPJ_T0026630.1 MGP_LPJ_G0017533.1 mouse_genomes_project 10 89236418 89305908 + MGP_LPJ_P0026630 Pah protein_coding protein_coding MGP_LPJ_T0026631.1 MGP_LPJ_G0017533.1 mouse_genomes_project 10 89236515 89305729 + MGP_LPJ_P0026631 Pah protein_coding protein_coding MGP_LPJ_T0026632.1 MGP_LPJ_G0017533.1 mouse_genomes_project 10 89267008 89291360 + MGP_LPJ_P0026632 Pah protein_coding protein_coding MGP_LPJ_T0025704.1 MGP_LPJ_G0017277.1 mouse_genomes_project 10 76508588 76516110 - MGP_LPJ_P0025704 Gstt4 protein_coding protein_coding MGP_LPJ_T0025705.1 MGP_LPJ_G0017277.1 mouse_genomes_project 10 76508589 76516094 - MGP_LPJ_P0025705 Gstt4 protein_coding nonsense_mediated_decay MGP_LPJ_T0024371.1 MGP_LPJ_G0016905.1 mouse_genomes_project 10 3753168 3774216 - MGP_LPJ_P0024371 Gm10945 protein_coding protein_coding MGP_LPJ_T0025099.1 MGP_LPJ_G0017133.1 mouse_genomes_project 10 51260868 51404614 - MGP_LPJ_P0025099 Ros1 protein_coding nonsense_mediated_decay MGP_LPJ_T0025100.1 MGP_LPJ_G0017133.1 mouse_genomes_project 10 51261073 51404902 - MGP_LPJ_P0025100 Ros1 protein_coding protein_coding MGP_LPJ_T0025101.1 MGP_LPJ_G0017133.1 mouse_genomes_project 10 51261163 51404614 - MGP_LPJ_P0025101 Ros1 protein_coding protein_coding MGP_LPJ_T0025102.1 MGP_LPJ_G0017133.1 mouse_genomes_project 10 51261163 51404614 - MGP_LPJ_P0025102 Ros1 protein_coding nonsense_mediated_decay MGP_LPJ_T0027042.1 MGP_LPJ_G0017656.1 mouse_genomes_project 10 119447801 119450055 - MGP_LPJ_P0027042 4933416C03Rik protein_coding protein_coding MGP_LPJ_T0101756.1 MGP_LPJ_G0039794.1 mouse_genomes_project 10 134481014 134481203 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0009598.1 MGP_LPJ_G0007716.1 mouse_genomes_project 10 59720842 59720900 + Mir6906 miRNA miRNA MGP_LPJ_T0027494.1 MGP_LPJ_G0017810.1 mouse_genomes_project 10 133537988 133542897 - MGP_LPJ_P0027494 Olfr770 protein_coding protein_coding MGP_LPJ_T0027495.1 MGP_LPJ_G0017810.1 mouse_genomes_project 10 133537988 133538924 - MGP_LPJ_P0027495 Olfr770 protein_coding protein_coding MGP_LPJ_T0027496.1 MGP_LPJ_G0017810.1 mouse_genomes_project 10 133538534 133543640 - MGP_LPJ_P0027496 Olfr770 protein_coding protein_coding MGP_LPJ_T0027497.1 MGP_LPJ_G0017810.1 mouse_genomes_project 10 133538601 133543644 - MGP_LPJ_P0027497 Olfr770 protein_coding protein_coding MGP_LPJ_T0027554.1 MGP_LPJ_G0017851.1 mouse_genomes_project 10 134467622 134468441 - MGP_LPJ_P0027554 protein_coding protein_coding MGP_LPJ_T0026356.1 MGP_LPJ_G0017462.1 mouse_genomes_project 10 82480707 82485856 + MGP_LPJ_P0026356 Cactin protein_coding protein_coding MGP_LPJ_T0000850.1 MGP_LPJ_G0000780.1 mouse_genomes_project 10 35532590 35532937 + TEC TEC MGP_LPJ_T0025938.1 MGP_LPJ_G0017356.1 mouse_genomes_project 10 80532057 80539370 - Plpp2 protein_coding processed_transcript MGP_LPJ_T0025939.1 MGP_LPJ_G0017356.1 mouse_genomes_project 10 80532759 80539303 - MGP_LPJ_P0025939 Plpp2 protein_coding protein_coding MGP_LPJ_T0025940.1 MGP_LPJ_G0017356.1 mouse_genomes_project 10 80533114 80539400 - MGP_LPJ_P0025940 Plpp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0006132.1 MGP_LPJ_G0005132.1 mouse_genomes_project 10 78277898 78311903 + 2810425M01Rik lincRNA lincRNA MGP_LPJ_T0003122.1 MGP_LPJ_G0002905.1 mouse_genomes_project 10 124100380 124103587 + 9230105E05Rik antisense antisense MGP_LPJ_T0025333.1 MGP_LPJ_G0017205.1 mouse_genomes_project 10 61979622 62031572 - MGP_LPJ_P0025333 Tspan15 protein_coding protein_coding MGP_LPJ_T0025431.1 MGP_LPJ_G0017228.1 mouse_genomes_project 10 63320724 63339291 + Dnajc12 protein_coding retained_intron MGP_LPJ_T0025432.1 MGP_LPJ_G0017228.1 mouse_genomes_project 10 63320851 63338747 + MGP_LPJ_P0025432 Dnajc12 protein_coding protein_coding MGP_LPJ_T0003123.1 MGP_LPJ_G0002906.1 mouse_genomes_project 10 124649968 124654269 + Gm4473 antisense antisense MGP_LPJ_T0025304.1 MGP_LPJ_G0017198.1 mouse_genomes_project 10 61440339 61453518 + MGP_LPJ_P0025304 Sar1a protein_coding protein_coding MGP_LPJ_T0026875.1 MGP_LPJ_G0017589.1 mouse_genomes_project 10 98386276 98386588 + MGP_LPJ_P0026875 Gm5426 protein_coding protein_coding MGP_LPJ_T0000866.1 MGP_LPJ_G0000795.1 mouse_genomes_project 10 117242761 117243365 + TEC TEC MGP_LPJ_T0026257.1 MGP_LPJ_G0017434.1 mouse_genomes_project 10 81946449 81950825 + MGP_LPJ_P0026257 protein_coding protein_coding MGP_LPJ_T0026258.1 MGP_LPJ_G0017434.1 mouse_genomes_project 10 81946475 81950819 + protein_coding retained_intron MGP_LPJ_T0026259.1 MGP_LPJ_G0017434.1 mouse_genomes_project 10 81946476 81950492 + MGP_LPJ_P0026259 protein_coding protein_coding MGP_LPJ_T0026260.1 MGP_LPJ_G0017434.1 mouse_genomes_project 10 81946479 81950825 + MGP_LPJ_P0026260 protein_coding protein_coding MGP_LPJ_T0026261.1 MGP_LPJ_G0017434.1 mouse_genomes_project 10 81946486 81950540 + MGP_LPJ_P0026261 protein_coding protein_coding MGP_LPJ_T0026262.1 MGP_LPJ_G0017434.1 mouse_genomes_project 10 81947505 81950512 + MGP_LPJ_P0026262 protein_coding protein_coding MGP_LPJ_T0026263.1 MGP_LPJ_G0017434.1 mouse_genomes_project 10 81948430 81950820 + MGP_LPJ_P0026263 protein_coding protein_coding MGP_LPJ_T0012423.1 MGP_LPJ_G0010514.1 mouse_genomes_project 10 76299528 76299952 - processed_pseudogene processed_pseudogene MGP_LPJ_T0026319.1 MGP_LPJ_G0017453.1 mouse_genomes_project 10 82330443 82345065 + MGP_LPJ_P0026319 Dapk3 protein_coding protein_coding MGP_LPJ_T0024662.1 MGP_LPJ_G0016973.1 mouse_genomes_project 10 18529332 18665204 + MGP_LPJ_P0024662 Ahi1 protein_coding protein_coding MGP_LPJ_T0024663.1 MGP_LPJ_G0016973.1 mouse_genomes_project 10 18623817 18665204 + MGP_LPJ_P0024663 Ahi1 protein_coding protein_coding MGP_LPJ_T0027068.1 MGP_LPJ_G0017660.1 mouse_genomes_project 10 120163285 120291519 - MGP_LPJ_P0027068 Myrfl protein_coding protein_coding MGP_LPJ_T0024935.1 MGP_LPJ_G0017084.1 mouse_genomes_project 10 39483673 39547092 + MGP_LPJ_P0024935 Wasf1 protein_coding protein_coding MGP_LPJ_T0024936.1 MGP_LPJ_G0017084.1 mouse_genomes_project 10 39484025 39547093 + MGP_LPJ_P0024936 Wasf1 protein_coding protein_coding MGP_LPJ_T0100068.1 MGP_LPJ_G0038331.1 mouse_genomes_project 10 33461730 33461864 + Gm26341 snoRNA snoRNA MGP_LPJ_T0017036.1 MGP_LPJ_G0015043.1 mouse_genomes_project 10 1401132 1416182 + Gm16153 processed_transcript processed_transcript MGP_LPJ_T0026617.1 MGP_LPJ_G0017529.1 mouse_genomes_project 10 88458683 88514902 + MGP_LPJ_P0026617 Nt5dc3 protein_coding protein_coding MGP_LPJ_T0100053.1 MGP_LPJ_G0038316.1 mouse_genomes_project 10 6987078 6987209 - Gm25635 snoRNA snoRNA MGP_LPJ_T0027161.1 MGP_LPJ_G0017691.1 mouse_genomes_project 10 124802717 124874958 + MGP_LPJ_P0027161 Wif1 protein_coding protein_coding MGP_LPJ_T0027162.1 MGP_LPJ_G0017691.1 mouse_genomes_project 10 124802781 124874954 + MGP_LPJ_P0027162 Wif1 protein_coding protein_coding MGP_LPJ_T0027163.1 MGP_LPJ_G0017691.1 mouse_genomes_project 10 124855272 124874945 + Wif1 protein_coding retained_intron MGP_LPJ_T0003078.1 MGP_LPJ_G0002876.1 mouse_genomes_project 10 81881949 81886226 - antisense antisense MGP_LPJ_T0025416.1 MGP_LPJ_G0017223.1 mouse_genomes_project 10 62885758 62958576 + MGP_LPJ_P0025416 Pbld2 protein_coding protein_coding MGP_LPJ_T0025417.1 MGP_LPJ_G0017223.1 mouse_genomes_project 10 62944655 62984084 + MGP_LPJ_P0025417 Pbld2 protein_coding protein_coding MGP_LPJ_T0025418.1 MGP_LPJ_G0017223.1 mouse_genomes_project 10 62944691 62983656 + MGP_LPJ_P0025418 Pbld2 protein_coding protein_coding MGP_LPJ_T0024908.1 MGP_LPJ_G0017070.1 mouse_genomes_project 10 38390068 38395872 - MGP_LPJ_P0024908 Mfsd4b4 protein_coding protein_coding MGP_LPJ_T0024909.1 MGP_LPJ_G0017070.1 mouse_genomes_project 10 38390068 38399289 - MGP_LPJ_P0024909 Mfsd4b4 protein_coding protein_coding MGP_LPJ_T0024487.1 MGP_LPJ_G0016928.1 mouse_genomes_project 10 8316016 8354619 + MGP_LPJ_P0024487 Shprh protein_coding nonsense_mediated_decay MGP_LPJ_T0024488.1 MGP_LPJ_G0016928.1 mouse_genomes_project 10 8316019 8386341 + MGP_LPJ_P0024488 Shprh protein_coding protein_coding MGP_LPJ_T0024489.1 MGP_LPJ_G0016928.1 mouse_genomes_project 10 8316062 8321116 + Shprh protein_coding retained_intron MGP_LPJ_T0024490.1 MGP_LPJ_G0016928.1 mouse_genomes_project 10 8316113 8378298 + MGP_LPJ_P0024490 Shprh protein_coding protein_coding MGP_LPJ_T0024491.1 MGP_LPJ_G0016928.1 mouse_genomes_project 10 8316113 8378298 + MGP_LPJ_P0024491 Shprh protein_coding protein_coding MGP_LPJ_T0024492.1 MGP_LPJ_G0016928.1 mouse_genomes_project 10 8330912 8336631 + MGP_LPJ_P0024492 Shprh protein_coding nonsense_mediated_decay MGP_LPJ_T0024493.1 MGP_LPJ_G0016928.1 mouse_genomes_project 10 8333024 8383043 + Shprh protein_coding retained_intron MGP_LPJ_T0024494.1 MGP_LPJ_G0016928.1 mouse_genomes_project 10 8372567 8378357 + Shprh protein_coding retained_intron MGP_LPJ_T0026266.1 MGP_LPJ_G0017437.1 mouse_genomes_project 10 81976803 81991457 + MGP_LPJ_P0026266 Sppl2b protein_coding protein_coding MGP_LPJ_T0009648.1 MGP_LPJ_G0007766.1 mouse_genomes_project 10 127083346 127083442 - Gm27920 miRNA miRNA MGP_LPJ_T0025037.1 MGP_LPJ_G0017108.1 mouse_genomes_project 10 41986681 42181299 + MGP_LPJ_P0025037 Pdss2 protein_coding nonsense_mediated_decay MGP_LPJ_T0025038.1 MGP_LPJ_G0017108.1 mouse_genomes_project 10 41986681 42218775 + MGP_LPJ_P0025038 Pdss2 protein_coding protein_coding MGP_LPJ_T0025039.1 MGP_LPJ_G0017108.1 mouse_genomes_project 10 41986712 42118199 + Pdss2 protein_coding retained_intron MGP_LPJ_T0025040.1 MGP_LPJ_G0017108.1 mouse_genomes_project 10 41986795 42243605 + MGP_LPJ_P0025040 Pdss2 protein_coding protein_coding MGP_LPJ_T0025041.1 MGP_LPJ_G0017108.1 mouse_genomes_project 10 41986931 42117796 + Pdss2 protein_coding retained_intron MGP_LPJ_T0025042.1 MGP_LPJ_G0017108.1 mouse_genomes_project 10 42167367 42218421 + MGP_LPJ_P0025042 Pdss2 protein_coding protein_coding MGP_LPJ_T0025575.1 MGP_LPJ_G0017256.1 mouse_genomes_project 10 71776987 71821035 + MGP_LPJ_P0025575 Ipmk protein_coding protein_coding MGP_LPJ_T0025576.1 MGP_LPJ_G0017256.1 mouse_genomes_project 10 71777060 71812641 + MGP_LPJ_P0025576 Ipmk protein_coding protein_coding MGP_LPJ_T0025577.1 MGP_LPJ_G0017256.1 mouse_genomes_project 10 71777060 71812880 + MGP_LPJ_P0025577 Ipmk protein_coding nonsense_mediated_decay MGP_LPJ_T0025578.1 MGP_LPJ_G0017256.1 mouse_genomes_project 10 71777060 71808061 + MGP_LPJ_P0025578 Ipmk protein_coding protein_coding MGP_LPJ_T0025579.1 MGP_LPJ_G0017256.1 mouse_genomes_project 10 71777067 71793450 + Ipmk protein_coding retained_intron MGP_LPJ_T0025580.1 MGP_LPJ_G0017256.1 mouse_genomes_project 10 71812389 71868950 + MGP_LPJ_P0025580 Ipmk protein_coding nonsense_mediated_decay MGP_LPJ_T0025581.1 MGP_LPJ_G0017256.1 mouse_genomes_project 10 71844024 71869097 + Ipmk protein_coding processed_transcript MGP_LPJ_T0025563.1 MGP_LPJ_G0017252.1 mouse_genomes_project 10 71317862 71579038 - MGP_LPJ_P0025563 Bicc1 protein_coding protein_coding MGP_LPJ_T0025564.1 MGP_LPJ_G0017252.1 mouse_genomes_project 10 71320123 71579028 - MGP_LPJ_P0025564 Bicc1 protein_coding protein_coding MGP_LPJ_T0025565.1 MGP_LPJ_G0017252.1 mouse_genomes_project 10 71322751 71576096 - MGP_LPJ_P0025565 Bicc1 protein_coding protein_coding MGP_LPJ_T0025566.1 MGP_LPJ_G0017252.1 mouse_genomes_project 10 71329125 71343587 - Bicc1 protein_coding retained_intron MGP_LPJ_T0027214.1 MGP_LPJ_G0017711.1 mouse_genomes_project 10 131154834 131174074 - MGP_LPJ_P0027214 Tsfm protein_coding protein_coding MGP_LPJ_T0027215.1 MGP_LPJ_G0017711.1 mouse_genomes_project 10 131165601 131174111 - MGP_LPJ_P0027215 Tsfm protein_coding protein_coding MGP_LPJ_T0027216.1 MGP_LPJ_G0017711.1 mouse_genomes_project 10 131165716 131168366 - Tsfm protein_coding retained_intron MGP_LPJ_T0027217.1 MGP_LPJ_G0017711.1 mouse_genomes_project 10 131165894 131173662 - Tsfm protein_coding processed_transcript MGP_LPJ_T0027218.1 MGP_LPJ_G0017711.1 mouse_genomes_project 10 131166176 131174030 - Tsfm protein_coding retained_intron MGP_LPJ_T0027219.1 MGP_LPJ_G0017711.1 mouse_genomes_project 10 131167503 131174070 - MGP_LPJ_P0027219 Tsfm protein_coding protein_coding MGP_LPJ_T0027220.1 MGP_LPJ_G0017711.1 mouse_genomes_project 10 131172492 131174074 - Tsfm protein_coding retained_intron MGP_LPJ_T0003094.1 MGP_LPJ_G0002887.1 mouse_genomes_project 10 87743369 87747397 + Gm15990 antisense antisense MGP_LPJ_T0026806.1 MGP_LPJ_G0017568.1 mouse_genomes_project 10 95628288 95634845 - MGP_LPJ_P0026806 Snrpf protein_coding protein_coding MGP_LPJ_T0027276.1 MGP_LPJ_G0017731.1 mouse_genomes_project 10 131495820 131508035 - MGP_LPJ_P0027276 Gli1 protein_coding protein_coding MGP_LPJ_T0003115.1 MGP_LPJ_G0002901.1 mouse_genomes_project 10 123066128 123094698 - Grip1os3 antisense antisense MGP_LPJ_T0003116.1 MGP_LPJ_G0002901.1 mouse_genomes_project 10 123077878 123095247 - Grip1os3 antisense antisense MGP_LPJ_T0003117.1 MGP_LPJ_G0002901.1 mouse_genomes_project 10 123077878 123094648 - Grip1os3 antisense antisense MGP_LPJ_T0012436.1 MGP_LPJ_G0010527.1 mouse_genomes_project 10 108950329 108950722 - processed_pseudogene processed_pseudogene MGP_LPJ_T0025726.1 MGP_LPJ_G0017287.1 mouse_genomes_project 10 76783560 76844305 - MGP_LPJ_P0025726 Slc5a4b protein_coding protein_coding MGP_LPJ_T0025367.1 MGP_LPJ_G0017212.1 mouse_genomes_project 10 62312952 62348815 - MGP_LPJ_P0025367 Srgn protein_coding protein_coding MGP_LPJ_T0025368.1 MGP_LPJ_G0017212.1 mouse_genomes_project 10 62313547 62329257 - MGP_LPJ_P0025368 Srgn protein_coding protein_coding MGP_LPJ_T0025369.1 MGP_LPJ_G0017212.1 mouse_genomes_project 10 62313803 62329440 - MGP_LPJ_P0025369 Srgn protein_coding protein_coding MGP_LPJ_T0025370.1 MGP_LPJ_G0017212.1 mouse_genomes_project 10 62317984 62348789 - MGP_LPJ_P0025370 Srgn protein_coding protein_coding MGP_LPJ_T0025371.1 MGP_LPJ_G0017212.1 mouse_genomes_project 10 62329177 62329599 - MGP_LPJ_P0025371 Srgn protein_coding protein_coding MGP_LPJ_T0025372.1 MGP_LPJ_G0017212.1 mouse_genomes_project 10 62329243 62348789 - Srgn protein_coding processed_transcript MGP_LPJ_T0025991.1 MGP_LPJ_G0017372.1 mouse_genomes_project 10 80808907 80817757 - MGP_LPJ_P0025991 Prss57 protein_coding protein_coding MGP_LPJ_T0025992.1 MGP_LPJ_G0017372.1 mouse_genomes_project 10 80808909 80819733 - MGP_LPJ_P0025992 Prss57 protein_coding protein_coding MGP_LPJ_T0025993.1 MGP_LPJ_G0017372.1 mouse_genomes_project 10 80810351 80811987 - MGP_LPJ_P0025993 Prss57 protein_coding protein_coding MGP_LPJ_T0025994.1 MGP_LPJ_G0017372.1 mouse_genomes_project 10 80810529 80812005 - MGP_LPJ_P0025994 Prss57 protein_coding protein_coding MGP_LPJ_T0027159.1 MGP_LPJ_G0017690.1 mouse_genomes_project 10 124676743 124736531 - MGP_LPJ_P0027159 Lemd3 protein_coding protein_coding MGP_LPJ_T0027160.1 MGP_LPJ_G0017690.1 mouse_genomes_project 10 124677182 124736531 - MGP_LPJ_P0027160 Lemd3 protein_coding protein_coding MGP_LPJ_T0026288.1 MGP_LPJ_G0017446.1 mouse_genomes_project 10 82199065 82211588 + MGP_LPJ_P0026288 Thop1 protein_coding protein_coding MGP_LPJ_T0026289.1 MGP_LPJ_G0017446.1 mouse_genomes_project 10 82199157 82203906 + Thop1 protein_coding retained_intron MGP_LPJ_T0026290.1 MGP_LPJ_G0017446.1 mouse_genomes_project 10 82199189 82207633 + Thop1 protein_coding processed_transcript MGP_LPJ_T0026291.1 MGP_LPJ_G0017446.1 mouse_genomes_project 10 82202307 82207784 + Thop1 protein_coding retained_intron MGP_LPJ_T0026292.1 MGP_LPJ_G0017446.1 mouse_genomes_project 10 82207896 82209108 + Thop1 protein_coding retained_intron MGP_LPJ_T0024839.1 MGP_LPJ_G0017047.1 mouse_genomes_project 10 32317051 32317117 - MGP_LPJ_P0024839 Gm17567 protein_coding protein_coding MGP_LPJ_T0026887.1 MGP_LPJ_G0017598.1 mouse_genomes_project 10 101491919 101599827 + MGP_LPJ_P0026887 Poc1b protein_coding protein_coding MGP_LPJ_T0026888.1 MGP_LPJ_G0017598.1 mouse_genomes_project 10 101491965 101598891 + MGP_LPJ_P0026888 Poc1b protein_coding protein_coding MGP_LPJ_T0026889.1 MGP_LPJ_G0017598.1 mouse_genomes_project 10 101491986 101599913 + MGP_LPJ_P0026889 Poc1b protein_coding protein_coding MGP_LPJ_T0026892.1 MGP_LPJ_G0017598.1 mouse_genomes_project 10 101514412 101590530 + MGP_LPJ_P0026892 Poc1b protein_coding nonsense_mediated_decay MGP_LPJ_T0026893.1 MGP_LPJ_G0017598.1 mouse_genomes_project 10 101565553 101598867 + Poc1b protein_coding processed_transcript MGP_LPJ_T0026894.1 MGP_LPJ_G0017598.1 mouse_genomes_project 10 101590632 101598689 + Poc1b protein_coding processed_transcript MGP_LPJ_T0027464.1 MGP_LPJ_G0017793.1 mouse_genomes_project 10 133112568 133132825 + MGP_LPJ_P0027464 Pym1 protein_coding protein_coding MGP_LPJ_T0026486.1 MGP_LPJ_G0017489.1 mouse_genomes_project 10 83798628 83804709 - MGP_LPJ_P0026486 Gm1553 protein_coding protein_coding MGP_LPJ_T0025048.1 MGP_LPJ_G0017111.1 mouse_genomes_project 10 42377496 42382812 + MGP_LPJ_P0025048 Cd24a protein_coding protein_coding MGP_LPJ_T0027508.1 MGP_LPJ_G0017819.1 mouse_genomes_project 10 133799729 133800533 + MGP_LPJ_P0027508 Olfr784 protein_coding protein_coding MGP_LPJ_T0012413.1 MGP_LPJ_G0010504.1 mouse_genomes_project 10 61043175 61043804 + processed_pseudogene processed_pseudogene MGP_LPJ_T0025062.1 MGP_LPJ_G0017118.1 mouse_genomes_project 10 43976379 44072031 + MGP_LPJ_P0025062 Prep protein_coding protein_coding MGP_LPJ_T0025995.1 MGP_LPJ_G0017373.1 mouse_genomes_project 10 80822333 80850917 + MGP_LPJ_P0025995 Palm protein_coding protein_coding MGP_LPJ_T0025996.1 MGP_LPJ_G0017373.1 mouse_genomes_project 10 80822333 80850917 + MGP_LPJ_P0025996 Palm protein_coding protein_coding MGP_LPJ_T0000864.1 MGP_LPJ_G0000793.1 mouse_genomes_project 10 112994460 112994752 - TEC TEC MGP_LPJ_T0025567.1 MGP_LPJ_G0017253.1 mouse_genomes_project 10 71650973 71657961 - Tfam protein_coding processed_transcript MGP_LPJ_T0025568.1 MGP_LPJ_G0017253.1 mouse_genomes_project 10 71650984 71660920 - MGP_LPJ_P0025568 Tfam protein_coding protein_coding MGP_LPJ_T0025569.1 MGP_LPJ_G0017253.1 mouse_genomes_project 10 71651086 71660580 - MGP_LPJ_P0025569 Tfam protein_coding protein_coding MGP_LPJ_T0025570.1 MGP_LPJ_G0017253.1 mouse_genomes_project 10 71651643 71659682 - MGP_LPJ_P0025570 Tfam protein_coding protein_coding MGP_LPJ_T0025269.1 MGP_LPJ_G0017187.1 mouse_genomes_project 10 60802414 60855549 - MGP_LPJ_P0025269 Sgpl1 protein_coding protein_coding MGP_LPJ_T0025270.1 MGP_LPJ_G0017187.1 mouse_genomes_project 10 60802414 60855519 - MGP_LPJ_P0025270 Sgpl1 protein_coding protein_coding MGP_LPJ_T0025271.1 MGP_LPJ_G0017187.1 mouse_genomes_project 10 60802417 60855519 - MGP_LPJ_P0025271 Sgpl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0025272.1 MGP_LPJ_G0017187.1 mouse_genomes_project 10 60804597 60806898 - Sgpl1 protein_coding retained_intron MGP_LPJ_T0025273.1 MGP_LPJ_G0017187.1 mouse_genomes_project 10 60807967 60809250 - Sgpl1 protein_coding retained_intron MGP_LPJ_T0025274.1 MGP_LPJ_G0017187.1 mouse_genomes_project 10 60817073 60855578 - MGP_LPJ_P0025274 Sgpl1 protein_coding protein_coding MGP_LPJ_T0025275.1 MGP_LPJ_G0017187.1 mouse_genomes_project 10 60818987 60855551 - MGP_LPJ_P0025275 Sgpl1 protein_coding protein_coding MGP_LPJ_T0025276.1 MGP_LPJ_G0017187.1 mouse_genomes_project 10 60822325 60855527 - Sgpl1 protein_coding processed_transcript MGP_LPJ_T0025277.1 MGP_LPJ_G0017187.1 mouse_genomes_project 10 60828200 60854705 - MGP_LPJ_P0025277 Sgpl1 protein_coding protein_coding MGP_LPJ_T0025278.1 MGP_LPJ_G0017187.1 mouse_genomes_project 10 60853701 60855479 - Sgpl1 protein_coding retained_intron MGP_LPJ_T0011306.1 MGP_LPJ_G0009424.1 mouse_genomes_project 10 133571666 133571971 - Gm25807 misc_RNA misc_RNA MGP_LPJ_T0006121.1 MGP_LPJ_G0005125.1 mouse_genomes_project 10 65162854 65163696 - Gm28881 lincRNA lincRNA MGP_LPJ_T0025932.1 MGP_LPJ_G0017350.1 mouse_genomes_project 10 80011187 80012267 + MGP_LPJ_P0025932 Olfr57 protein_coding protein_coding MGP_LPJ_T0098875.1 MGP_LPJ_G0037138.1 mouse_genomes_project 10 118258190 118258297 + Gm22070 snRNA snRNA MGP_LPJ_T0027509.1 MGP_LPJ_G0017820.1 mouse_genomes_project 10 133824872 133825811 + MGP_LPJ_P0027509 Gm44444 protein_coding protein_coding MGP_LPJ_T0006092.1 MGP_LPJ_G0005101.1 mouse_genomes_project 10 8410619 8447339 - 4930432B10Rik lincRNA lincRNA MGP_LPJ_T0006093.1 MGP_LPJ_G0005101.1 mouse_genomes_project 10 8422458 8447561 - 4930432B10Rik lincRNA lincRNA MGP_LPJ_T0024721.1 MGP_LPJ_G0017002.1 mouse_genomes_project 10 22022341 22025388 + MGP_LPJ_P0024721 Taar8c protein_coding protein_coding MGP_LPJ_T0003118.1 MGP_LPJ_G0002902.1 mouse_genomes_project 10 123081764 123082711 - Gm16321 antisense antisense MGP_LPJ_T0024325.1 MGP_LPJ_G0016892.1 mouse_genomes_project 10 1248865 1345213 + MGP_LPJ_P0024325 Akap12 protein_coding protein_coding MGP_LPJ_T0025758.1 MGP_LPJ_G0017297.1 mouse_genomes_project 10 77295886 77303582 + MGP_LPJ_P0025758 Spatc1l protein_coding protein_coding MGP_LPJ_T0025759.1 MGP_LPJ_G0017297.1 mouse_genomes_project 10 77295923 77303411 + MGP_LPJ_P0025759 Spatc1l protein_coding protein_coding MGP_LPJ_T0098859.1 MGP_LPJ_G0037122.1 mouse_genomes_project 10 89080663 89080770 - Gm23191 snRNA snRNA MGP_LPJ_T0098818.1 MGP_LPJ_G0037081.1 mouse_genomes_project 10 2363837 2363944 + Gm23573 snRNA snRNA MGP_LPJ_T0024482.1 MGP_LPJ_G0016927.1 mouse_genomes_project 10 7838138 8247079 - MGP_LPJ_P0024482 Grm1 protein_coding protein_coding MGP_LPJ_T0024483.1 MGP_LPJ_G0016927.1 mouse_genomes_project 10 7838138 7942679 - MGP_LPJ_P0024483 Grm1 protein_coding protein_coding MGP_LPJ_T0024484.1 MGP_LPJ_G0016927.1 mouse_genomes_project 10 7841532 7871548 - Grm1 protein_coding processed_transcript MGP_LPJ_T0024485.1 MGP_LPJ_G0016927.1 mouse_genomes_project 10 7899152 7901779 - Grm1 protein_coding processed_transcript MGP_LPJ_T0024486.1 MGP_LPJ_G0016927.1 mouse_genomes_project 10 8245223 8246973 - Grm1 protein_coding processed_transcript MGP_LPJ_T0098861.1 MGP_LPJ_G0037124.1 mouse_genomes_project 10 91669069 91669176 - Gm26180 snRNA snRNA MGP_LPJ_T0027072.1 MGP_LPJ_G0017663.1 mouse_genomes_project 10 120388726 120430363 + MGP_LPJ_P0027072 Best3 protein_coding protein_coding MGP_LPJ_T0098470.1 MGP_LPJ_G0036750.1 mouse_genomes_project 10 96503762 96505604 + Gm16155 sense_intronic sense_intronic MGP_LPJ_T0003120.1 MGP_LPJ_G0002904.1 mouse_genomes_project 10 123486666 123517577 - Grip1os1 antisense antisense MGP_LPJ_T0003121.1 MGP_LPJ_G0002904.1 mouse_genomes_project 10 123512359 123517464 - Grip1os1 antisense antisense MGP_LPJ_T0027305.1 MGP_LPJ_G0017737.1 mouse_genomes_project 10 131707724 131713999 - MGP_LPJ_P0027305 Shmt2 protein_coding protein_coding MGP_LPJ_T0098868.1 MGP_LPJ_G0037131.1 mouse_genomes_project 10 107179846 107180003 - Gm22945 snRNA snRNA MGP_LPJ_T0025745.1 MGP_LPJ_G0017292.1 mouse_genomes_project 10 77089439 77180890 - MGP_LPJ_P0025745 Pcnt protein_coding protein_coding MGP_LPJ_T0025746.1 MGP_LPJ_G0017292.1 mouse_genomes_project 10 77089443 77180732 - MGP_LPJ_P0025746 Pcnt protein_coding unknown_likely_coding MGP_LPJ_T0027374.1 MGP_LPJ_G0017761.1 mouse_genomes_project 10 132423120 132478963 - MGP_LPJ_P0027374 Rbms2 protein_coding protein_coding MGP_LPJ_T0026549.1 MGP_LPJ_G0017505.1 mouse_genomes_project 10 86087445 86128247 + MGP_LPJ_P0026549 Tcp11l2 protein_coding protein_coding MGP_LPJ_T0026550.1 MGP_LPJ_G0017505.1 mouse_genomes_project 10 86087716 86107181 + Tcp11l2 protein_coding retained_intron MGP_LPJ_T0026551.1 MGP_LPJ_G0017505.1 mouse_genomes_project 10 86106535 86118856 + Tcp11l2 protein_coding retained_intron MGP_LPJ_T0009606.1 MGP_LPJ_G0007724.1 mouse_genomes_project 10 76719762 76719854 + Mir6409 miRNA miRNA MGP_LPJ_T0003060.1 MGP_LPJ_G0002860.1 mouse_genomes_project 10 62964884 62966749 - antisense antisense MGP_LPJ_T0026901.1 MGP_LPJ_G0017605.1 mouse_genomes_project 10 102795391 102796239 + MGP_LPJ_P0026901 protein_coding protein_coding MGP_LPJ_T0098848.1 MGP_LPJ_G0037111.1 mouse_genomes_project 10 66234248 66234354 - Gm22829 snRNA snRNA MGP_LPJ_T0101243.1 MGP_LPJ_G0039491.1 mouse_genomes_project 10 88599991 88603229 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0026406.1 MGP_LPJ_G0017473.1 mouse_genomes_project 10 82659313 82669457 - MGP_LPJ_P0026406 Ncln protein_coding protein_coding MGP_LPJ_T0026407.1 MGP_LPJ_G0017473.1 mouse_genomes_project 10 82659521 82669391 - MGP_LPJ_P0026407 Ncln protein_coding protein_coding MGP_LPJ_T0026408.1 MGP_LPJ_G0017473.1 mouse_genomes_project 10 82660162 82661462 - Ncln protein_coding retained_intron MGP_LPJ_T0026409.1 MGP_LPJ_G0017473.1 mouse_genomes_project 10 82660354 82661282 - MGP_LPJ_P0026409 Ncln protein_coding protein_coding MGP_LPJ_T0026410.1 MGP_LPJ_G0017473.1 mouse_genomes_project 10 82660404 82661708 - Ncln protein_coding retained_intron MGP_LPJ_T0026411.1 MGP_LPJ_G0017473.1 mouse_genomes_project 10 82660444 82661706 - Ncln protein_coding retained_intron MGP_LPJ_T0026412.1 MGP_LPJ_G0017473.1 mouse_genomes_project 10 82661290 82663333 - Ncln protein_coding retained_intron MGP_LPJ_T0026413.1 MGP_LPJ_G0017473.1 mouse_genomes_project 10 82663989 82665120 - Ncln protein_coding retained_intron MGP_LPJ_T0026414.1 MGP_LPJ_G0017473.1 mouse_genomes_project 10 82666387 82669407 - Ncln protein_coding retained_intron MGP_LPJ_T0024783.1 MGP_LPJ_G0017023.1 mouse_genomes_project 10 26797080 27018729 + MGP_LPJ_P0024783 Themis protein_coding protein_coding MGP_LPJ_T0024784.1 MGP_LPJ_G0017023.1 mouse_genomes_project 10 26797080 26919658 + MGP_LPJ_P0024784 Themis protein_coding protein_coding MGP_LPJ_T0024785.1 MGP_LPJ_G0017023.1 mouse_genomes_project 10 26797115 26899418 + Themis protein_coding retained_intron MGP_LPJ_T0024786.1 MGP_LPJ_G0017023.1 mouse_genomes_project 10 26797117 26927552 + MGP_LPJ_P0024786 Themis protein_coding protein_coding MGP_LPJ_T0024787.1 MGP_LPJ_G0017023.1 mouse_genomes_project 10 26797347 27018732 + MGP_LPJ_P0024787 Themis protein_coding nonsense_mediated_decay MGP_LPJ_T0024788.1 MGP_LPJ_G0017023.1 mouse_genomes_project 10 26797353 26911815 + MGP_LPJ_P0024788 Themis protein_coding protein_coding MGP_LPJ_T0024789.1 MGP_LPJ_G0017023.1 mouse_genomes_project 10 26797353 26869093 + MGP_LPJ_P0024789 Themis protein_coding nonsense_mediated_decay MGP_LPJ_T0006098.1 MGP_LPJ_G0005105.1 mouse_genomes_project 10 15729375 15732310 + Gm10827 lincRNA lincRNA MGP_LPJ_T0026618.1 MGP_LPJ_G0017530.1 mouse_genomes_project 10 88517425 88710170 - MGP_LPJ_P0026618 Stab2 protein_coding protein_coding MGP_LPJ_T0026619.1 MGP_LPJ_G0017530.1 mouse_genomes_project 10 88517548 88576565 - MGP_LPJ_P0026619 Stab2 protein_coding nonsense_mediated_decay MGP_LPJ_T0026620.1 MGP_LPJ_G0017530.1 mouse_genomes_project 10 88550764 88562426 - Stab2 protein_coding retained_intron MGP_LPJ_T0026621.1 MGP_LPJ_G0017530.1 mouse_genomes_project 10 88552733 88570708 - Stab2 protein_coding retained_intron MGP_LPJ_T0026622.1 MGP_LPJ_G0017530.1 mouse_genomes_project 10 88609157 88631075 - Stab2 protein_coding processed_transcript MGP_LPJ_T0026623.1 MGP_LPJ_G0017530.1 mouse_genomes_project 10 88688080 88710157 - Stab2 protein_coding processed_transcript MGP_LPJ_T0026624.1 MGP_LPJ_G0017530.1 mouse_genomes_project 10 88689763 88710167 - Stab2 protein_coding processed_transcript MGP_LPJ_T0006137.1 MGP_LPJ_G0005135.1 mouse_genomes_project 10 81790160 81795499 + Gm26541 lincRNA lincRNA MGP_LPJ_T0024501.1 MGP_LPJ_G0016932.1 mouse_genomes_project 10 10183966 10213358 - MGP_LPJ_P0024501 Stx11 protein_coding protein_coding MGP_LPJ_T0024502.1 MGP_LPJ_G0016932.1 mouse_genomes_project 10 10183966 10213358 - MGP_LPJ_P0024502 Stx11 protein_coding protein_coding MGP_LPJ_T0026625.1 MGP_LPJ_G0017531.1 mouse_genomes_project 10 88768311 88927144 + MGP_LPJ_P0026625 1700113H08Rik protein_coding protein_coding MGP_LPJ_T0026626.1 MGP_LPJ_G0017531.1 mouse_genomes_project 10 88768312 88927143 + MGP_LPJ_P0026626 1700113H08Rik protein_coding protein_coding MGP_LPJ_T0026627.1 MGP_LPJ_G0017531.1 mouse_genomes_project 10 88902539 88927142 + MGP_LPJ_P0026627 1700113H08Rik protein_coding protein_coding MGP_LPJ_T0025910.1 MGP_LPJ_G0017336.1 mouse_genomes_project 10 79322075 79324025 + MGP_LPJ_P0025910 Cstb protein_coding protein_coding MGP_LPJ_T0026871.1 MGP_LPJ_G0017585.1 mouse_genomes_project 10 97706177 97739385 + MGP_LPJ_P0026871 Ube2n protein_coding protein_coding MGP_LPJ_T0009622.1 MGP_LPJ_G0007740.1 mouse_genomes_project 10 82547557 82547623 + Mir6913 miRNA miRNA MGP_LPJ_T0003103.1 MGP_LPJ_G0002894.1 mouse_genomes_project 10 96671566 96718642 - Tmcc3os antisense antisense MGP_LPJ_T0098105.1 MGP_LPJ_G0036386.1 mouse_genomes_project 10 40042422 40042527 - Gm27783 rRNA rRNA MGP_LPJ_T0006143.1 MGP_LPJ_G0005140.1 mouse_genomes_project 10 86133219 86136472 - Gm17249 lincRNA lincRNA MGP_LPJ_T0025182.1 MGP_LPJ_G0017165.1 mouse_genomes_project 10 58337850 58579069 + MGP_LPJ_P0025182 Sh3rf3 protein_coding protein_coding MGP_LPJ_T0025183.1 MGP_LPJ_G0017165.1 mouse_genomes_project 10 58337949 58672034 + MGP_LPJ_P0025183 Sh3rf3 protein_coding protein_coding MGP_LPJ_T0025184.1 MGP_LPJ_G0017165.1 mouse_genomes_project 10 58338550 58541645 + Sh3rf3 protein_coding retained_intron MGP_LPJ_T0025185.1 MGP_LPJ_G0017165.1 mouse_genomes_project 10 58595527 58636326 + Sh3rf3 protein_coding retained_intron MGP_LPJ_T0025186.1 MGP_LPJ_G0017165.1 mouse_genomes_project 10 58609960 58635804 + Sh3rf3 protein_coding processed_transcript MGP_LPJ_T0026238.1 MGP_LPJ_G0017427.1 mouse_genomes_project 10 81811042 81813732 + MGP_LPJ_P0026238 Izumo4 protein_coding protein_coding MGP_LPJ_T0097967.1 MGP_LPJ_G0036248.1 mouse_genomes_project 10 58757574 58762053 + pseudogene pseudogene MGP_LPJ_T0011300.1 MGP_LPJ_G0009418.1 mouse_genomes_project 10 97084053 97084357 + Gm25266 misc_RNA misc_RNA MGP_LPJ_T0024875.1 MGP_LPJ_G0017064.1 mouse_genomes_project 10 37580364 37594700 - MGP_LPJ_P0024875 Fam229b protein_coding protein_coding MGP_LPJ_T0024876.1 MGP_LPJ_G0017064.1 mouse_genomes_project 10 37580368 37594694 - MGP_LPJ_P0024876 Fam229b protein_coding protein_coding MGP_LPJ_T0024877.1 MGP_LPJ_G0017064.1 mouse_genomes_project 10 37580370 37594642 - MGP_LPJ_P0024877 Fam229b protein_coding protein_coding MGP_LPJ_T0024878.1 MGP_LPJ_G0017064.1 mouse_genomes_project 10 37580370 37584663 - MGP_LPJ_P0024878 Fam229b protein_coding protein_coding MGP_LPJ_T0024879.1 MGP_LPJ_G0017064.1 mouse_genomes_project 10 37580378 37594694 - MGP_LPJ_P0024879 Fam229b protein_coding protein_coding MGP_LPJ_T0024880.1 MGP_LPJ_G0017064.1 mouse_genomes_project 10 37580379 37594694 - MGP_LPJ_P0024880 Fam229b protein_coding protein_coding MGP_LPJ_T0024881.1 MGP_LPJ_G0017064.1 mouse_genomes_project 10 37580380 37583875 - MGP_LPJ_P0024881 Fam229b protein_coding protein_coding MGP_LPJ_T0024882.1 MGP_LPJ_G0017064.1 mouse_genomes_project 10 37580384 37594708 - MGP_LPJ_P0024882 Fam229b protein_coding protein_coding MGP_LPJ_T0024883.1 MGP_LPJ_G0017064.1 mouse_genomes_project 10 37580428 37594694 - MGP_LPJ_P0024883 Fam229b protein_coding protein_coding MGP_LPJ_T0024884.1 MGP_LPJ_G0017064.1 mouse_genomes_project 10 37581179 37594651 - Fam229b protein_coding retained_intron MGP_LPJ_T0101744.1 MGP_LPJ_G0039782.1 mouse_genomes_project 10 21951821 21952354 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0024699.1 MGP_LPJ_G0016986.1 mouse_genomes_project 10 20983529 21231835 - MGP_LPJ_P0024699 Eya4 protein_coding protein_coding MGP_LPJ_T0024700.1 MGP_LPJ_G0016986.1 mouse_genomes_project 10 20984124 21231827 - MGP_LPJ_P0024700 Eya4 protein_coding protein_coding MGP_LPJ_T0026890.1 MGP_LPJ_G0017599.1 mouse_genomes_project 10 101493042 101498131 + MGP_LPJ_P0026890 Galnt4 protein_coding protein_coding MGP_LPJ_T0024610.1 MGP_LPJ_G0016957.1 mouse_genomes_project 10 16292851 16299291 - MGP_LPJ_P0024610 Gm4922 protein_coding protein_coding MGP_LPJ_T0006111.1 MGP_LPJ_G0005115.1 mouse_genomes_project 10 38399379 38409152 + 4930547M16Rik lincRNA lincRNA MGP_LPJ_T0025842.1 MGP_LPJ_G0017319.1 mouse_genomes_project 10 78572854 78573987 - MGP_LPJ_P0025842 protein_coding protein_coding MGP_LPJ_T0012418.1 MGP_LPJ_G0010509.1 mouse_genomes_project 10 67420610 67438179 - processed_pseudogene processed_pseudogene MGP_LPJ_T0024720.1 MGP_LPJ_G0017001.1 mouse_genomes_project 10 21960731 21961808 + MGP_LPJ_P0024720 Taar7d protein_coding protein_coding MGP_LPJ_T0012414.1 MGP_LPJ_G0010505.1 mouse_genomes_project 10 61043175 61043798 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098877.1 MGP_LPJ_G0037140.1 mouse_genomes_project 10 131291652 131291741 - Gm23664 snRNA snRNA MGP_LPJ_T0025120.1 MGP_LPJ_G0017143.1 mouse_genomes_project 10 52855273 52867526 + MGP_LPJ_P0025120 Asf1a protein_coding protein_coding MGP_LPJ_T0006145.1 MGP_LPJ_G0005142.1 mouse_genomes_project 10 90130063 90134548 - Gm26546 lincRNA lincRNA MGP_LPJ_T0006094.1 MGP_LPJ_G0005102.1 mouse_genomes_project 10 10158474 10164996 - B230208H11Rik lincRNA lincRNA MGP_LPJ_T0006095.1 MGP_LPJ_G0005102.1 mouse_genomes_project 10 10158505 10164986 - B230208H11Rik lincRNA lincRNA MGP_LPJ_T0024692.1 MGP_LPJ_G0016983.1 mouse_genomes_project 10 20521893 20576973 + MGP_LPJ_P0024692 Slc2a12 protein_coding protein_coding MGP_LPJ_T0024693.1 MGP_LPJ_G0016983.1 mouse_genomes_project 10 20525892 20541452 + Slc2a12 protein_coding processed_transcript MGP_LPJ_T0026961.1 MGP_LPJ_G0017623.1 mouse_genomes_project 10 110306902 110308729 - MGP_LPJ_P0026961 Myf6 protein_coding protein_coding MGP_LPJ_T0024932.1 MGP_LPJ_G0017081.1 mouse_genomes_project 10 39214761 39236909 + MGP_LPJ_P0024932 Ddo protein_coding protein_coding MGP_LPJ_T0012442.1 MGP_LPJ_G0010533.1 mouse_genomes_project 10 132193804 132194099 + processed_pseudogene processed_pseudogene MGP_LPJ_T0025196.1 MGP_LPJ_G0017171.1 mouse_genomes_project 10 58989675 59166114 - MGP_LPJ_P0025196 Mcu protein_coding protein_coding MGP_LPJ_T0025197.1 MGP_LPJ_G0017171.1 mouse_genomes_project 10 58991290 59000840 - MGP_LPJ_P0025197 Mcu protein_coding protein_coding MGP_LPJ_T0025198.1 MGP_LPJ_G0017171.1 mouse_genomes_project 10 59077476 59166097 - MGP_LPJ_P0025198 Mcu protein_coding nonsense_mediated_decay MGP_LPJ_T0025199.1 MGP_LPJ_G0017171.1 mouse_genomes_project 10 59149662 59166101 - Mcu protein_coding processed_transcript MGP_LPJ_T0025200.1 MGP_LPJ_G0017171.1 mouse_genomes_project 10 59150426 59166077 - Mcu protein_coding processed_transcript MGP_LPJ_T0009637.1 MGP_LPJ_G0007755.1 mouse_genomes_project 10 104322236 104322317 + Mir3059 miRNA miRNA MGP_LPJ_T0024966.1 MGP_LPJ_G0017092.1 mouse_genomes_project 10 40157472 40170285 + MGP_LPJ_P0024966 Cd164 protein_coding protein_coding MGP_LPJ_T0024967.1 MGP_LPJ_G0017092.1 mouse_genomes_project 10 40157559 40163327 + Cd164 protein_coding retained_intron MGP_LPJ_T0024968.1 MGP_LPJ_G0017092.1 mouse_genomes_project 10 40157950 40168283 + MGP_LPJ_P0024968 Cd164 protein_coding protein_coding MGP_LPJ_T0024969.1 MGP_LPJ_G0017092.1 mouse_genomes_project 10 40158102 40164931 + Cd164 protein_coding processed_transcript MGP_LPJ_T0024867.1 MGP_LPJ_G0017062.1 mouse_genomes_project 10 37271217 37272456 - MGP_LPJ_P0024867 Rfpl4b protein_coding protein_coding MGP_LPJ_T0100097.1 MGP_LPJ_G0038360.1 mouse_genomes_project 10 104090640 104090772 + Gm26278 snoRNA snoRNA MGP_LPJ_T0026265.1 MGP_LPJ_G0017436.1 mouse_genomes_project 10 81974357 81976738 - MGP_LPJ_P0026265 Gm10146 protein_coding protein_coding MGP_LPJ_T0026750.1 MGP_LPJ_G0017556.1 mouse_genomes_project 10 92890028 92994076 - MGP_LPJ_P0026750 Apaf1 protein_coding protein_coding MGP_LPJ_T0026751.1 MGP_LPJ_G0017556.1 mouse_genomes_project 10 92890030 92892309 - Apaf1 protein_coding retained_intron MGP_LPJ_T0026752.1 MGP_LPJ_G0017556.1 mouse_genomes_project 10 92890035 92994184 - MGP_LPJ_P0026752 Apaf1 protein_coding protein_coding MGP_LPJ_T0026753.1 MGP_LPJ_G0017556.1 mouse_genomes_project 10 92891320 92994118 - MGP_LPJ_P0026753 Apaf1 protein_coding protein_coding MGP_LPJ_T0026754.1 MGP_LPJ_G0017556.1 mouse_genomes_project 10 92897893 92902565 - Apaf1 protein_coding processed_transcript MGP_LPJ_T0026755.1 MGP_LPJ_G0017556.1 mouse_genomes_project 10 92898894 92901876 - Apaf1 protein_coding retained_intron MGP_LPJ_T0026756.1 MGP_LPJ_G0017556.1 mouse_genomes_project 10 92972338 92993843 - MGP_LPJ_P0026756 Apaf1 protein_coding protein_coding MGP_LPJ_T0026757.1 MGP_LPJ_G0017556.1 mouse_genomes_project 10 92973770 92994184 - MGP_LPJ_P0026757 Apaf1 protein_coding protein_coding MGP_LPJ_T0027071.1 MGP_LPJ_G0017662.1 mouse_genomes_project 10 120357321 120374172 - MGP_LPJ_P0027071 Gm10271 protein_coding protein_coding MGP_LPJ_T0027428.1 MGP_LPJ_G0017778.1 mouse_genomes_project 10 132788212 132821963 + MGP_LPJ_P0027428 Smarcc2 protein_coding protein_coding MGP_LPJ_T0027429.1 MGP_LPJ_G0017778.1 mouse_genomes_project 10 132788212 132821963 + MGP_LPJ_P0027429 Smarcc2 protein_coding protein_coding MGP_LPJ_T0027430.1 MGP_LPJ_G0017778.1 mouse_genomes_project 10 132788212 132821963 + MGP_LPJ_P0027430 Smarcc2 protein_coding protein_coding MGP_LPJ_T0027020.1 MGP_LPJ_G0017647.1 mouse_genomes_project 10 118477446 118534479 - MGP_LPJ_P0027020 Tbc1d15 protein_coding protein_coding MGP_LPJ_T0026221.1 MGP_LPJ_G0017421.1 mouse_genomes_project 10 81703702 81708477 + MGP_LPJ_P0026221 Adat3 protein_coding protein_coding MGP_LPJ_T0026224.1 MGP_LPJ_G0017421.1 mouse_genomes_project 10 81706857 81716606 + MGP_LPJ_P0026224 Adat3 protein_coding protein_coding MGP_LPJ_T0025268.1 MGP_LPJ_G0017186.1 mouse_genomes_project 10 60791215 60796201 + MGP_LPJ_P0025268 Pcbd1 protein_coding protein_coding MGP_LPJ_T0024726.1 MGP_LPJ_G0017007.1 mouse_genomes_project 10 22184607 22263431 + MGP_LPJ_P0024726 Moxd1 protein_coding protein_coding MGP_LPJ_T0024727.1 MGP_LPJ_G0017007.1 mouse_genomes_project 10 22184635 22192281 + Moxd1 protein_coding processed_transcript MGP_LPJ_T0100093.1 MGP_LPJ_G0038356.1 mouse_genomes_project 10 94673154 94673297 - Gm24241 snoRNA snoRNA MGP_LPJ_T0026860.1 MGP_LPJ_G0017581.1 mouse_genomes_project 10 97330053 97495696 - MGP_LPJ_P0026860 Cradd protein_coding protein_coding MGP_LPJ_T0012438.1 MGP_LPJ_G0010529.1 mouse_genomes_project 10 121919284 121922156 - processed_pseudogene processed_pseudogene MGP_LPJ_T0026483.1 MGP_LPJ_G0017487.1 mouse_genomes_project 10 83540109 83556545 - MGP_LPJ_P0026483 Zfp938 protein_coding protein_coding MGP_LPJ_T0026484.1 MGP_LPJ_G0017487.1 mouse_genomes_project 10 83540113 83556552 - MGP_LPJ_P0026484 Zfp938 protein_coding nonsense_mediated_decay MGP_LPJ_T0009636.1 MGP_LPJ_G0007754.1 mouse_genomes_project 10 99726569 99726654 + Mir3966 miRNA miRNA MGP_LPJ_T0025909.1 MGP_LPJ_G0017335.1 mouse_genomes_project 10 79290381 79307898 - MGP_LPJ_P0025909 Rrp1 protein_coding protein_coding MGP_LPJ_T0025009.1 MGP_LPJ_G0017101.1 mouse_genomes_project 10 41204803 41244855 + MGP_LPJ_P0025009 Snx3 protein_coding protein_coding MGP_LPJ_T0025010.1 MGP_LPJ_G0017101.1 mouse_genomes_project 10 41204804 41245438 + MGP_LPJ_P0025010 Snx3 protein_coding protein_coding MGP_LPJ_T0025011.1 MGP_LPJ_G0017101.1 mouse_genomes_project 10 41205063 41245449 + MGP_LPJ_P0025011 Snx3 protein_coding protein_coding MGP_LPJ_T0026909.1 MGP_LPJ_G0017609.1 mouse_genomes_project 10 103070789 103083563 + MGP_LPJ_P0026909 1700017N19Rik protein_coding protein_coding MGP_LPJ_T0026910.1 MGP_LPJ_G0017609.1 mouse_genomes_project 10 103072628 103100375 + MGP_LPJ_P0026910 1700017N19Rik protein_coding protein_coding MGP_LPJ_T0026911.1 MGP_LPJ_G0017609.1 mouse_genomes_project 10 103072648 103100460 + MGP_LPJ_P0026911 1700017N19Rik protein_coding protein_coding MGP_LPJ_T0026912.1 MGP_LPJ_G0017609.1 mouse_genomes_project 10 103072654 103092713 + MGP_LPJ_P0026912 1700017N19Rik protein_coding protein_coding MGP_LPJ_T0026913.1 MGP_LPJ_G0017609.1 mouse_genomes_project 10 103072659 103100454 + MGP_LPJ_P0026913 1700017N19Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0026914.1 MGP_LPJ_G0017609.1 mouse_genomes_project 10 103072663 103100454 + MGP_LPJ_P0026914 1700017N19Rik protein_coding protein_coding MGP_LPJ_T0026915.1 MGP_LPJ_G0017609.1 mouse_genomes_project 10 103072674 103100377 + MGP_LPJ_P0026915 1700017N19Rik protein_coding protein_coding MGP_LPJ_T0026916.1 MGP_LPJ_G0017609.1 mouse_genomes_project 10 103072686 103100464 + MGP_LPJ_P0026916 1700017N19Rik protein_coding protein_coding MGP_LPJ_T0026917.1 MGP_LPJ_G0017609.1 mouse_genomes_project 10 103089350 103100372 + MGP_LPJ_P0026917 1700017N19Rik protein_coding protein_coding MGP_LPJ_T0098872.1 MGP_LPJ_G0037135.1 mouse_genomes_project 10 113903380 113903486 - Gm22236 snRNA snRNA MGP_LPJ_T0098847.1 MGP_LPJ_G0037110.1 mouse_genomes_project 10 64286281 64286389 - Gm23854 snRNA snRNA MGP_LPJ_T0027551.1 MGP_LPJ_G0017849.1 mouse_genomes_project 10 134384577 134385516 - MGP_LPJ_P0027551 Olfr816 protein_coding protein_coding MGP_LPJ_T0025240.1 MGP_LPJ_G0017181.1 mouse_genomes_project 10 59922121 60307893 - MGP_LPJ_P0025240 Cdh23 protein_coding protein_coding MGP_LPJ_T0025241.1 MGP_LPJ_G0017181.1 mouse_genomes_project 10 59922121 60307893 - MGP_LPJ_P0025241 Cdh23 protein_coding protein_coding MGP_LPJ_T0025242.1 MGP_LPJ_G0017181.1 mouse_genomes_project 10 59922123 60361823 - MGP_LPJ_P0025242 Cdh23 protein_coding protein_coding MGP_LPJ_T0025243.1 MGP_LPJ_G0017181.1 mouse_genomes_project 10 59922123 60361823 - MGP_LPJ_P0025243 Cdh23 protein_coding protein_coding MGP_LPJ_T0025244.1 MGP_LPJ_G0017181.1 mouse_genomes_project 10 59922123 60361823 - MGP_LPJ_P0025244 Cdh23 protein_coding protein_coding MGP_LPJ_T0025245.1 MGP_LPJ_G0017181.1 mouse_genomes_project 10 59922658 59942561 - Cdh23 protein_coding processed_transcript MGP_LPJ_T0025246.1 MGP_LPJ_G0017181.1 mouse_genomes_project 10 59922658 59942561 - Cdh23 protein_coding processed_transcript MGP_LPJ_T0025247.1 MGP_LPJ_G0017181.1 mouse_genomes_project 10 59922683 60307893 - Cdh23 protein_coding retained_intron MGP_LPJ_T0025248.1 MGP_LPJ_G0017181.1 mouse_genomes_project 10 59922683 60307893 - Cdh23 protein_coding retained_intron MGP_LPJ_T0025249.1 MGP_LPJ_G0017181.1 mouse_genomes_project 10 59922736 59925061 - Cdh23 protein_coding retained_intron MGP_LPJ_T0025256.1 MGP_LPJ_G0017181.1 mouse_genomes_project 10 60003400 60014986 - Cdh23 protein_coding retained_intron MGP_LPJ_T0025257.1 MGP_LPJ_G0017181.1 mouse_genomes_project 10 60004722 60036225 - Cdh23 protein_coding processed_transcript MGP_LPJ_T0025258.1 MGP_LPJ_G0017181.1 mouse_genomes_project 10 60004816 60008143 - Cdh23 protein_coding processed_transcript MGP_LPJ_T0025260.1 MGP_LPJ_G0017181.1 mouse_genomes_project 10 60228375 60361823 - Cdh23 protein_coding processed_transcript MGP_LPJ_T0025261.1 MGP_LPJ_G0017181.1 mouse_genomes_project 10 60276011 60303593 - Cdh23 protein_coding processed_transcript MGP_LPJ_T0025262.1 MGP_LPJ_G0017181.1 mouse_genomes_project 10 60307825 60352590 - Cdh23 protein_coding processed_transcript MGP_LPJ_T0026683.1 MGP_LPJ_G0017544.1 mouse_genomes_project 10 90463324 90472691 - MGP_LPJ_P0026683 Spic protein_coding protein_coding MGP_LPJ_T0026684.1 MGP_LPJ_G0017544.1 mouse_genomes_project 10 90464729 90472691 - MGP_LPJ_P0026684 Spic protein_coding nonsense_mediated_decay MGP_LPJ_T0026685.1 MGP_LPJ_G0017544.1 mouse_genomes_project 10 90465352 90474484 - MGP_LPJ_P0026685 Spic protein_coding protein_coding MGP_LPJ_T0026686.1 MGP_LPJ_G0017544.1 mouse_genomes_project 10 90467497 90472691 - Spic protein_coding retained_intron MGP_LPJ_T0009612.1 MGP_LPJ_G0007730.1 mouse_genomes_project 10 79342263 79342326 - Mir6908 miRNA miRNA MGP_LPJ_T0024943.1 MGP_LPJ_G0017089.1 mouse_genomes_project 10 40106240 40116955 + MGP_LPJ_P0024943 Mical1 protein_coding protein_coding MGP_LPJ_T0024944.1 MGP_LPJ_G0017089.1 mouse_genomes_project 10 40106240 40116953 + MGP_LPJ_P0024944 Mical1 protein_coding protein_coding MGP_LPJ_T0024945.1 MGP_LPJ_G0017089.1 mouse_genomes_project 10 40106262 40115148 + Mical1 protein_coding retained_intron MGP_LPJ_T0024946.1 MGP_LPJ_G0017089.1 mouse_genomes_project 10 40106294 40116955 + MGP_LPJ_P0024946 Mical1 protein_coding protein_coding MGP_LPJ_T0024947.1 MGP_LPJ_G0017089.1 mouse_genomes_project 10 40106303 40116955 + MGP_LPJ_P0024947 Mical1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024948.1 MGP_LPJ_G0017089.1 mouse_genomes_project 10 40107005 40108112 + MGP_LPJ_P0024948 Mical1 protein_coding protein_coding MGP_LPJ_T0024949.1 MGP_LPJ_G0017089.1 mouse_genomes_project 10 40108404 40111088 + Mical1 protein_coding retained_intron MGP_LPJ_T0024950.1 MGP_LPJ_G0017089.1 mouse_genomes_project 10 40109914 40111081 + Mical1 protein_coding retained_intron MGP_LPJ_T0024951.1 MGP_LPJ_G0017089.1 mouse_genomes_project 10 40111629 40112639 + Mical1 protein_coding retained_intron MGP_LPJ_T0024952.1 MGP_LPJ_G0017089.1 mouse_genomes_project 10 40113996 40114994 + Mical1 protein_coding retained_intron MGP_LPJ_T0024954.1 MGP_LPJ_G0017089.1 mouse_genomes_project 10 40116033 40116643 + Mical1 protein_coding retained_intron MGP_LPJ_T0024955.1 MGP_LPJ_G0017089.1 mouse_genomes_project 10 40116294 40116953 + Mical1 protein_coding retained_intron MGP_LPJ_T0024808.1 MGP_LPJ_G0017032.1 mouse_genomes_project 10 28741772 28819926 - MGP_LPJ_P0024808 Trmt11 protein_coding protein_coding MGP_LPJ_T0025115.1 MGP_LPJ_G0017140.1 mouse_genomes_project 10 52521476 52632986 - MGP_LPJ_P0025115 Cep85l protein_coding protein_coding MGP_LPJ_T0006159.1 MGP_LPJ_G0005146.1 mouse_genomes_project 10 94114963 94117532 + Gm26700 lincRNA lincRNA MGP_LPJ_T0027102.1 MGP_LPJ_G0017674.1 mouse_genomes_project 10 121251119 121293448 - MGP_LPJ_P0027102 Nup107 protein_coding protein_coding MGP_LPJ_T0027103.1 MGP_LPJ_G0017674.1 mouse_genomes_project 10 121251138 121293455 - MGP_LPJ_P0027103 Nup107 protein_coding protein_coding MGP_LPJ_T0026166.1 MGP_LPJ_G0017409.1 mouse_genomes_project 10 81400840 81407329 + MGP_LPJ_P0026166 Reep6 protein_coding protein_coding MGP_LPJ_T0026167.1 MGP_LPJ_G0017409.1 mouse_genomes_project 10 81400840 81407329 + MGP_LPJ_P0026167 Reep6 protein_coding protein_coding MGP_LPJ_T0026168.1 MGP_LPJ_G0017409.1 mouse_genomes_project 10 81401032 81407328 + MGP_LPJ_P0026168 Reep6 protein_coding protein_coding MGP_LPJ_T0026169.1 MGP_LPJ_G0017409.1 mouse_genomes_project 10 81401085 81405320 + Reep6 protein_coding retained_intron MGP_LPJ_T0026170.1 MGP_LPJ_G0017409.1 mouse_genomes_project 10 81401089 81406470 + MGP_LPJ_P0026170 Reep6 protein_coding protein_coding MGP_LPJ_T0100112.1 MGP_LPJ_G0038375.1 mouse_genomes_project 10 132376863 132376935 + Mir677 snoRNA snoRNA MGP_LPJ_T0027559.1 MGP_LPJ_G0017855.1 mouse_genomes_project 10 134633192 134636365 - MGP_LPJ_P0027559 Olfr824 protein_coding protein_coding MGP_LPJ_T0006136.1 MGP_LPJ_G0005134.1 mouse_genomes_project 10 81677472 81679654 + Gm26710 lincRNA lincRNA MGP_LPJ_T0003064.1 MGP_LPJ_G0002863.1 mouse_genomes_project 10 70668456 70669175 - Gm7097 antisense antisense MGP_LPJ_T0012390.1 MGP_LPJ_G0010481.1 mouse_genomes_project 10 19808677 19809617 + processed_pseudogene processed_pseudogene MGP_LPJ_T0026807.1 MGP_LPJ_G0017569.1 mouse_genomes_project 10 95634550 95651971 + MGP_LPJ_P0026807 4933408J17Rik protein_coding protein_coding MGP_LPJ_T0098821.1 MGP_LPJ_G0037084.1 mouse_genomes_project 10 9576305 9576470 + Gm23680 snRNA snRNA MGP_LPJ_T0025850.1 MGP_LPJ_G0017325.1 mouse_genomes_project 10 78755341 78821545 - MGP_LPJ_P0025850 Trpm2 protein_coding protein_coding MGP_LPJ_T0025851.1 MGP_LPJ_G0017325.1 mouse_genomes_project 10 78756784 78815550 - Trpm2 protein_coding processed_transcript MGP_LPJ_T0025852.1 MGP_LPJ_G0017325.1 mouse_genomes_project 10 78756922 78779395 - Trpm2 protein_coding retained_intron MGP_LPJ_T0025853.1 MGP_LPJ_G0017325.1 mouse_genomes_project 10 78756980 78783129 - Trpm2 protein_coding retained_intron MGP_LPJ_T0025854.1 MGP_LPJ_G0017325.1 mouse_genomes_project 10 78763677 78768444 - Trpm2 protein_coding retained_intron MGP_LPJ_T0025855.1 MGP_LPJ_G0017325.1 mouse_genomes_project 10 78764908 78788125 - Trpm2 protein_coding retained_intron MGP_LPJ_T0025856.1 MGP_LPJ_G0017325.1 mouse_genomes_project 10 78810890 78821495 - MGP_LPJ_P0025856 Trpm2 protein_coding protein_coding MGP_LPJ_T0025857.1 MGP_LPJ_G0017325.1 mouse_genomes_project 10 78815137 78822254 - Trpm2 protein_coding processed_transcript MGP_LPJ_T0026453.1 MGP_LPJ_G0017480.1 mouse_genomes_project 10 82796673 82810790 + BC025920 protein_coding processed_transcript MGP_LPJ_T0026454.1 MGP_LPJ_G0017480.1 mouse_genomes_project 10 82796706 82800240 + MGP_LPJ_P0026454 BC025920 protein_coding protein_coding MGP_LPJ_T0026455.1 MGP_LPJ_G0017480.1 mouse_genomes_project 10 82797286 82799949 + MGP_LPJ_P0026455 BC025920 protein_coding protein_coding MGP_LPJ_T0026456.1 MGP_LPJ_G0017480.1 mouse_genomes_project 10 82797286 82799949 + MGP_LPJ_P0026456 BC025920 protein_coding protein_coding MGP_LPJ_T0026457.1 MGP_LPJ_G0017480.1 mouse_genomes_project 10 82797428 82800213 + MGP_LPJ_P0026457 BC025920 protein_coding protein_coding MGP_LPJ_T0025057.1 MGP_LPJ_G0017116.1 mouse_genomes_project 10 43133574 43245253 + MGP_LPJ_P0025057 Atg5 protein_coding protein_coding MGP_LPJ_T0026458.1 MGP_LPJ_G0017481.1 mouse_genomes_project 10 82811871 82817404 - MGP_LPJ_P0026458 Sirt6 protein_coding protein_coding MGP_LPJ_T0026459.1 MGP_LPJ_G0017481.1 mouse_genomes_project 10 82811873 82817881 - MGP_LPJ_P0026459 Sirt6 protein_coding protein_coding MGP_LPJ_T0026460.1 MGP_LPJ_G0017481.1 mouse_genomes_project 10 82815610 82817650 - Sirt6 protein_coding retained_intron MGP_LPJ_T0026461.1 MGP_LPJ_G0017481.1 mouse_genomes_project 10 82815862 82817341 - MGP_LPJ_P0026461 Sirt6 protein_coding protein_coding MGP_LPJ_T0000852.1 MGP_LPJ_G0000782.1 mouse_genomes_project 10 63008295 63008637 + TEC TEC MGP_LPJ_T0012405.1 MGP_LPJ_G0010496.1 mouse_genomes_project 10 42145622 42146055 - processed_pseudogene processed_pseudogene MGP_LPJ_T0026896.1 MGP_LPJ_G0017602.1 mouse_genomes_project 10 101866621 101869899 + MGP_LPJ_P0026896 Gad1-ps protein_coding protein_coding MGP_LPJ_T0003124.1 MGP_LPJ_G0002907.1 mouse_genomes_project 10 125619208 125620574 + C030027H14Rik antisense antisense MGP_LPJ_T0025103.1 MGP_LPJ_G0017134.1 mouse_genomes_project 10 51439615 51539114 + MGP_LPJ_P0025103 Dcbld1 protein_coding protein_coding MGP_LPJ_T0025104.1 MGP_LPJ_G0017134.1 mouse_genomes_project 10 51439629 51498505 + Dcbld1 protein_coding retained_intron MGP_LPJ_T0025105.1 MGP_LPJ_G0017134.1 mouse_genomes_project 10 51439633 51539116 + MGP_LPJ_P0025105 Dcbld1 protein_coding protein_coding MGP_LPJ_T0024434.1 MGP_LPJ_G0016913.1 mouse_genomes_project 10 4745748 4782924 + MGP_LPJ_P0024434 Lats1 protein_coding protein_coding MGP_LPJ_T0024435.1 MGP_LPJ_G0016913.1 mouse_genomes_project 10 4756353 4780054 + MGP_LPJ_P0024435 Lats1 protein_coding protein_coding MGP_LPJ_T0026587.1 MGP_LPJ_G0017521.1 mouse_genomes_project 10 87644130 87678435 + MGP_LPJ_P0026587 Fbxo7 protein_coding protein_coding MGP_LPJ_T0026588.1 MGP_LPJ_G0017521.1 mouse_genomes_project 10 87644186 87673158 + MGP_LPJ_P0026588 Fbxo7 protein_coding nonsense_mediated_decay MGP_LPJ_T0026589.1 MGP_LPJ_G0017521.1 mouse_genomes_project 10 87644218 87651329 + MGP_LPJ_P0026589 Fbxo7 protein_coding nonsense_mediated_decay MGP_LPJ_T0026590.1 MGP_LPJ_G0017521.1 mouse_genomes_project 10 87644388 87673188 + MGP_LPJ_P0026590 Fbxo7 protein_coding protein_coding MGP_LPJ_T0026591.1 MGP_LPJ_G0017521.1 mouse_genomes_project 10 87655174 87676736 + Fbxo7 protein_coding processed_transcript MGP_LPJ_T0026592.1 MGP_LPJ_G0017521.1 mouse_genomes_project 10 87667317 87671676 + Fbxo7 protein_coding retained_intron MGP_LPJ_T0006116.1 MGP_LPJ_G0005120.1 mouse_genomes_project 10 60615929 60626987 - Pldi lincRNA lincRNA MGP_LPJ_T0024403.1 MGP_LPJ_G0016907.1 mouse_genomes_project 10 3900068 4002119 - MGP_LPJ_P0024403 Ipcef1 protein_coding protein_coding MGP_LPJ_T0024404.1 MGP_LPJ_G0016907.1 mouse_genomes_project 10 3904692 4001453 - MGP_LPJ_P0024404 Ipcef1 protein_coding protein_coding MGP_LPJ_T0024405.1 MGP_LPJ_G0016907.1 mouse_genomes_project 10 3927062 4072081 - MGP_LPJ_P0024405 Ipcef1 protein_coding protein_coding MGP_LPJ_T0024406.1 MGP_LPJ_G0016907.1 mouse_genomes_project 10 3927062 4041472 - MGP_LPJ_P0024406 Ipcef1 protein_coding protein_coding MGP_LPJ_T0024407.1 MGP_LPJ_G0016907.1 mouse_genomes_project 10 3933000 4002057 - Ipcef1 protein_coding processed_transcript MGP_LPJ_T0024408.1 MGP_LPJ_G0016907.1 mouse_genomes_project 10 3933000 4002208 - Ipcef1 protein_coding processed_transcript MGP_LPJ_T0024409.1 MGP_LPJ_G0016907.1 mouse_genomes_project 10 3935279 4041454 - MGP_LPJ_P0024409 Ipcef1 protein_coding protein_coding MGP_LPJ_T0024410.1 MGP_LPJ_G0016907.1 mouse_genomes_project 10 3935359 4002277 - Ipcef1 protein_coding processed_transcript MGP_LPJ_T0024411.1 MGP_LPJ_G0016907.1 mouse_genomes_project 10 3980735 4021543 - MGP_LPJ_P0024411 Ipcef1 protein_coding protein_coding MGP_LPJ_T0025897.1 MGP_LPJ_G0017333.1 mouse_genomes_project 10 79064557 79122493 - MGP_LPJ_P0025897 Trappc10 protein_coding protein_coding MGP_LPJ_T0026931.1 MGP_LPJ_G0017612.1 mouse_genomes_project 10 105113948 105150958 + MGP_LPJ_P0026931 Rassf9 protein_coding protein_coding MGP_LPJ_T0024886.1 MGP_LPJ_G0017066.1 mouse_genomes_project 10 37612671 37625449 - MGP_LPJ_P0024886 Wisp3 protein_coding protein_coding MGP_LPJ_T0009584.1 MGP_LPJ_G0007702.1 mouse_genomes_project 10 4910056 4910150 + Mir5104 miRNA miRNA MGP_LPJ_T0027258.1 MGP_LPJ_G0017726.1 mouse_genomes_project 10 131424199 131441315 + MGP_LPJ_P0027258 Dctn2 protein_coding protein_coding MGP_LPJ_T0025093.1 MGP_LPJ_G0017130.1 mouse_genomes_project 10 50855681 50916467 + Rfx6 protein_coding retained_intron MGP_LPJ_T0025094.1 MGP_LPJ_G0017130.1 mouse_genomes_project 10 50855681 50924988 + MGP_LPJ_P0025094 Rfx6 protein_coding protein_coding MGP_LPJ_T0025095.1 MGP_LPJ_G0017130.1 mouse_genomes_project 10 50863445 50924988 + MGP_LPJ_P0025095 Rfx6 protein_coding protein_coding MGP_LPJ_T0024309.1 MGP_LPJ_G0016886.1 mouse_genomes_project 10 22448 31976 + MGP_LPJ_P0024309 9230019H11Rik protein_coding protein_coding MGP_LPJ_T0025789.1 MGP_LPJ_G0017304.1 mouse_genomes_project 10 77804209 77925723 - MGP_LPJ_P0025789 Col18a1 protein_coding protein_coding MGP_LPJ_T0025790.1 MGP_LPJ_G0017304.1 mouse_genomes_project 10 77804212 77869041 - MGP_LPJ_P0025790 Col18a1 protein_coding protein_coding MGP_LPJ_T0025791.1 MGP_LPJ_G0017304.1 mouse_genomes_project 10 77805047 77869070 - MGP_LPJ_P0025791 Col18a1 protein_coding protein_coding MGP_LPJ_T0025792.1 MGP_LPJ_G0017304.1 mouse_genomes_project 10 77833670 77842403 - MGP_LPJ_P0025792 Col18a1 protein_coding protein_coding MGP_LPJ_T0025793.1 MGP_LPJ_G0017304.1 mouse_genomes_project 10 77849283 77869311 - MGP_LPJ_P0025793 Col18a1 protein_coding protein_coding MGP_LPJ_T0025936.1 MGP_LPJ_G0017354.1 mouse_genomes_project 10 80349970 80396844 + MGP_LPJ_P0025936 protein_coding protein_coding MGP_LPJ_T0003085.1 MGP_LPJ_G0002880.1 mouse_genomes_project 10 82573726 82575731 + Gm16104 antisense antisense MGP_LPJ_T0009628.1 MGP_LPJ_G0007746.1 mouse_genomes_project 10 94023233 94023333 - Mir135a-2 miRNA miRNA MGP_LPJ_T0009590.1 MGP_LPJ_G0007708.1 mouse_genomes_project 10 26326336 26326419 - Gm22370 miRNA miRNA MGP_LPJ_T0006186.1 MGP_LPJ_G0005164.1 mouse_genomes_project 10 132537133 132539345 - Gm26847 lincRNA lincRNA MGP_LPJ_T0100065.1 MGP_LPJ_G0038328.1 mouse_genomes_project 10 23266087 23266218 - Gm25016 snoRNA snoRNA MGP_LPJ_T0024938.1 MGP_LPJ_G0017086.1 mouse_genomes_project 10 39814927 39938217 - MGP_LPJ_P0024938 Fig4 protein_coding protein_coding MGP_LPJ_T0026153.1 MGP_LPJ_G0017406.1 mouse_genomes_project 10 81367385 81389441 + MGP_LPJ_P0026153 Apc2 protein_coding protein_coding MGP_LPJ_T0026154.1 MGP_LPJ_G0017406.1 mouse_genomes_project 10 81370469 81373740 + MGP_LPJ_P0026154 Apc2 protein_coding protein_coding MGP_LPJ_T0026155.1 MGP_LPJ_G0017406.1 mouse_genomes_project 10 81372225 81374734 + Apc2 protein_coding retained_intron MGP_LPJ_T0026156.1 MGP_LPJ_G0017406.1 mouse_genomes_project 10 81372412 81373726 + MGP_LPJ_P0026156 Apc2 protein_coding protein_coding MGP_LPJ_T0026157.1 MGP_LPJ_G0017406.1 mouse_genomes_project 10 81372413 81373785 + MGP_LPJ_P0026157 Apc2 protein_coding protein_coding MGP_LPJ_T0026158.1 MGP_LPJ_G0017406.1 mouse_genomes_project 10 81373198 81389434 + MGP_LPJ_P0026158 Apc2 protein_coding protein_coding MGP_LPJ_T0025163.1 MGP_LPJ_G0017158.1 mouse_genomes_project 10 57736698 57749781 + MGP_LPJ_P0025163 Gcc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0025164.1 MGP_LPJ_G0017158.1 mouse_genomes_project 10 57736720 57787736 + MGP_LPJ_P0025164 Gcc2 protein_coding protein_coding MGP_LPJ_T0025165.1 MGP_LPJ_G0017158.1 mouse_genomes_project 10 57736756 57786658 + MGP_LPJ_P0025165 Gcc2 protein_coding protein_coding MGP_LPJ_T0025166.1 MGP_LPJ_G0017158.1 mouse_genomes_project 10 57736903 57749653 + MGP_LPJ_P0025166 Gcc2 protein_coding protein_coding MGP_LPJ_T0025167.1 MGP_LPJ_G0017158.1 mouse_genomes_project 10 57737081 57748364 + Gcc2 protein_coding processed_transcript MGP_LPJ_T0025168.1 MGP_LPJ_G0017158.1 mouse_genomes_project 10 57753763 57756612 + Gcc2 protein_coding retained_intron MGP_LPJ_T0025169.1 MGP_LPJ_G0017158.1 mouse_genomes_project 10 57755274 57762876 + MGP_LPJ_P0025169 Gcc2 protein_coding protein_coding MGP_LPJ_T0025170.1 MGP_LPJ_G0017158.1 mouse_genomes_project 10 57767230 57774072 + Gcc2 protein_coding retained_intron MGP_LPJ_T0025171.1 MGP_LPJ_G0017158.1 mouse_genomes_project 10 57779713 57788083 + Gcc2 protein_coding retained_intron MGP_LPJ_T0025666.1 MGP_LPJ_G0017269.1 mouse_genomes_project 10 76230481 76247025 + MGP_LPJ_P0025666 Ggt1 protein_coding protein_coding MGP_LPJ_T0025667.1 MGP_LPJ_G0017269.1 mouse_genomes_project 10 76230532 76247072 + MGP_LPJ_P0025667 Ggt1 protein_coding protein_coding MGP_LPJ_T0025668.1 MGP_LPJ_G0017269.1 mouse_genomes_project 10 76233025 76243202 + MGP_LPJ_P0025668 Ggt1 protein_coding protein_coding MGP_LPJ_T0025669.1 MGP_LPJ_G0017269.1 mouse_genomes_project 10 76233032 76247025 + MGP_LPJ_P0025669 Ggt1 protein_coding protein_coding MGP_LPJ_T0025670.1 MGP_LPJ_G0017269.1 mouse_genomes_project 10 76235170 76249687 + MGP_LPJ_P0025670 Ggt1 protein_coding protein_coding MGP_LPJ_T0025671.1 MGP_LPJ_G0017269.1 mouse_genomes_project 10 76235175 76250135 + MGP_LPJ_P0025671 Ggt1 protein_coding protein_coding MGP_LPJ_T0025672.1 MGP_LPJ_G0017269.1 mouse_genomes_project 10 76237511 76250052 + MGP_LPJ_P0025672 Ggt1 protein_coding protein_coding MGP_LPJ_T0025673.1 MGP_LPJ_G0017269.1 mouse_genomes_project 10 76237518 76247072 + MGP_LPJ_P0025673 Ggt1 protein_coding protein_coding MGP_LPJ_T0025674.1 MGP_LPJ_G0017269.1 mouse_genomes_project 10 76237533 76256998 + MGP_LPJ_P0025674 Ggt1 protein_coding protein_coding MGP_LPJ_T0025675.1 MGP_LPJ_G0017269.1 mouse_genomes_project 10 76237534 76246824 + MGP_LPJ_P0025675 Ggt1 protein_coding protein_coding MGP_LPJ_T0025676.1 MGP_LPJ_G0017269.1 mouse_genomes_project 10 76237539 76247072 + MGP_LPJ_P0025676 Ggt1 protein_coding protein_coding MGP_LPJ_T0025677.1 MGP_LPJ_G0017269.1 mouse_genomes_project 10 76237551 76246739 + MGP_LPJ_P0025677 Ggt1 protein_coding protein_coding MGP_LPJ_T0025678.1 MGP_LPJ_G0017269.1 mouse_genomes_project 10 76240401 76249690 + MGP_LPJ_P0025678 Ggt1 protein_coding protein_coding MGP_LPJ_T0025679.1 MGP_LPJ_G0017269.1 mouse_genomes_project 10 76240406 76250130 + MGP_LPJ_P0025679 Ggt1 protein_coding protein_coding MGP_LPJ_T0025680.1 MGP_LPJ_G0017269.1 mouse_genomes_project 10 76240445 76252203 + Ggt1 protein_coding processed_transcript MGP_LPJ_T0025681.1 MGP_LPJ_G0017269.1 mouse_genomes_project 10 76242323 76256980 + MGP_LPJ_P0025681 Ggt1 protein_coding protein_coding MGP_LPJ_T0025682.1 MGP_LPJ_G0017269.1 mouse_genomes_project 10 76242761 76250153 + MGP_LPJ_P0025682 Ggt1 protein_coding protein_coding MGP_LPJ_T0025683.1 MGP_LPJ_G0017269.1 mouse_genomes_project 10 76246845 76255673 + MGP_LPJ_P0025683 Ggt1 protein_coding protein_coding MGP_LPJ_T0025684.1 MGP_LPJ_G0017269.1 mouse_genomes_project 10 76252139 76256956 + MGP_LPJ_P0025684 Ggt1 protein_coding protein_coding MGP_LPJ_T0025685.1 MGP_LPJ_G0017269.1 mouse_genomes_project 10 76255902 76256989 + Ggt1 protein_coding retained_intron MGP_LPJ_T0027221.1 MGP_LPJ_G0017712.1 mouse_genomes_project 10 131174274 131186455 - MGP_LPJ_P0027221 Mettl21b protein_coding protein_coding MGP_LPJ_T0024825.1 MGP_LPJ_G0017039.1 mouse_genomes_project 10 29726498 29847049 - MGP_LPJ_P0024825 Rnf217 protein_coding protein_coding MGP_LPJ_T0011289.1 MGP_LPJ_G0009407.1 mouse_genomes_project 10 70907971 70908283 - Gm22320 misc_RNA misc_RNA MGP_LPJ_T0026811.1 MGP_LPJ_G0017572.1 mouse_genomes_project 10 95903780 95943637 - MGP_LPJ_P0026811 Metap2 protein_coding protein_coding MGP_LPJ_T0026812.1 MGP_LPJ_G0017572.1 mouse_genomes_project 10 95905114 95910272 - Metap2 protein_coding retained_intron MGP_LPJ_T0026813.1 MGP_LPJ_G0017572.1 mouse_genomes_project 10 95906215 95945029 - MGP_LPJ_P0026813 Metap2 protein_coding protein_coding MGP_LPJ_T0026814.1 MGP_LPJ_G0017572.1 mouse_genomes_project 10 95906216 95943598 - MGP_LPJ_P0026814 Metap2 protein_coding protein_coding MGP_LPJ_T0026815.1 MGP_LPJ_G0017572.1 mouse_genomes_project 10 95906216 95943607 - MGP_LPJ_P0026815 Metap2 protein_coding protein_coding MGP_LPJ_T0026816.1 MGP_LPJ_G0017572.1 mouse_genomes_project 10 95906868 95920185 - MGP_LPJ_P0026816 Metap2 protein_coding nonsense_mediated_decay MGP_LPJ_T0026817.1 MGP_LPJ_G0017572.1 mouse_genomes_project 10 95907506 95910207 - Metap2 protein_coding retained_intron MGP_LPJ_T0026818.1 MGP_LPJ_G0017572.1 mouse_genomes_project 10 95917368 95920043 - Metap2 protein_coding retained_intron MGP_LPJ_T0026819.1 MGP_LPJ_G0017572.1 mouse_genomes_project 10 95917465 95943439 - MGP_LPJ_P0026819 Metap2 protein_coding protein_coding MGP_LPJ_T0026820.1 MGP_LPJ_G0017572.1 mouse_genomes_project 10 95918722 95943637 - MGP_LPJ_P0026820 Metap2 protein_coding protein_coding MGP_LPJ_T0026821.1 MGP_LPJ_G0017572.1 mouse_genomes_project 10 95929215 95943551 - Metap2 protein_coding retained_intron MGP_LPJ_T0026822.1 MGP_LPJ_G0017572.1 mouse_genomes_project 10 95929294 95943584 - Metap2 protein_coding retained_intron MGP_LPJ_T0026823.1 MGP_LPJ_G0017572.1 mouse_genomes_project 10 95943513 95944121 - Metap2 protein_coding processed_transcript MGP_LPJ_T0026824.1 MGP_LPJ_G0017572.1 mouse_genomes_project 10 95943750 95944956 - Metap2 protein_coding processed_transcript MGP_LPJ_T0026825.1 MGP_LPJ_G0017572.1 mouse_genomes_project 10 95943867 95950823 - Metap2 protein_coding processed_transcript MGP_LPJ_T0012406.1 MGP_LPJ_G0010497.1 mouse_genomes_project 10 43911191 43912199 + processed_pseudogene processed_pseudogene MGP_LPJ_T0025463.1 MGP_LPJ_G0017236.1 mouse_genomes_project 10 67724934 67729390 - MGP_LPJ_P0025463 Ado protein_coding protein_coding MGP_LPJ_T0025987.1 MGP_LPJ_G0017370.1 mouse_genomes_project 10 80783127 80791566 - MGP_LPJ_P0025987 Rnf126 protein_coding protein_coding MGP_LPJ_T0098817.1 MGP_LPJ_G0037080.1 mouse_genomes_project 10 1477007 1477167 + Gm22739 snRNA snRNA MGP_LPJ_T0026144.1 MGP_LPJ_G0017404.1 mouse_genomes_project 10 81331466 81351556 + MGP_LPJ_P0026144 Dazap1 protein_coding protein_coding MGP_LPJ_T0026145.1 MGP_LPJ_G0017404.1 mouse_genomes_project 10 81335751 81359991 + MGP_LPJ_P0026145 Dazap1 protein_coding protein_coding MGP_LPJ_T0026146.1 MGP_LPJ_G0017404.1 mouse_genomes_project 10 81335783 81359476 + MGP_LPJ_P0026146 Dazap1 protein_coding protein_coding MGP_LPJ_T0026147.1 MGP_LPJ_G0017404.1 mouse_genomes_project 10 81335841 81359991 + MGP_LPJ_P0026147 Dazap1 protein_coding protein_coding MGP_LPJ_T0026148.1 MGP_LPJ_G0017404.1 mouse_genomes_project 10 81335891 81348927 + Dazap1 protein_coding processed_transcript MGP_LPJ_T0026149.1 MGP_LPJ_G0017404.1 mouse_genomes_project 10 81350973 81355986 + Dazap1 protein_coding retained_intron MGP_LPJ_T0026150.1 MGP_LPJ_G0017404.1 mouse_genomes_project 10 81353417 81355072 + Dazap1 protein_coding retained_intron MGP_LPJ_T0098880.1 MGP_LPJ_G0037143.1 mouse_genomes_project 10 133323433 133323533 + Gm25494 snRNA snRNA MGP_LPJ_T0098834.1 MGP_LPJ_G0037097.1 mouse_genomes_project 10 43487740 43487828 - Gm22087 snRNA snRNA MGP_LPJ_T0009605.1 MGP_LPJ_G0007723.1 mouse_genomes_project 10 62526169 62526220 + Mir7215 miRNA miRNA MGP_LPJ_T0098109.1 MGP_LPJ_G0036390.1 mouse_genomes_project 10 96944134 96944261 - Gm24186 rRNA rRNA MGP_LPJ_T0027011.1 MGP_LPJ_G0017642.1 mouse_genomes_project 10 115441899 115636912 + MGP_LPJ_P0027011 Kcnc2 protein_coding unknown_likely_coding MGP_LPJ_T0027006.1 MGP_LPJ_G0017639.1 mouse_genomes_project 10 115173420 115212214 + MGP_LPJ_P0027006 Glipr1l1 protein_coding protein_coding MGP_LPJ_T0027543.1 MGP_LPJ_G0017843.1 mouse_genomes_project 10 134227088 134229895 - MGP_LPJ_P0027543 Olfr811 protein_coding protein_coding MGP_LPJ_T0025928.1 MGP_LPJ_G0017348.1 mouse_genomes_project 10 79951425 79955097 + MGP_LPJ_P0025928 Olfr1352 protein_coding protein_coding MGP_LPJ_T0025929.1 MGP_LPJ_G0017348.1 mouse_genomes_project 10 79951490 79954634 + MGP_LPJ_P0025929 Olfr1352 protein_coding protein_coding MGP_LPJ_T0026989.1 MGP_LPJ_G0017632.1 mouse_genomes_project 10 113947960 114022178 - MGP_LPJ_P0026989 Zdhhc17 protein_coding protein_coding MGP_LPJ_T0026990.1 MGP_LPJ_G0017632.1 mouse_genomes_project 10 113967648 114022115 - MGP_LPJ_P0026990 Zdhhc17 protein_coding protein_coding MGP_LPJ_T0100086.1 MGP_LPJ_G0038349.1 mouse_genomes_project 10 69407016 69407133 + Gm24172 snoRNA snoRNA MGP_LPJ_T0026565.1 MGP_LPJ_G0017514.1 mouse_genomes_project 10 86950310 87239293 + MGP_LPJ_P0026565 Btbd11 protein_coding protein_coding MGP_LPJ_T0026566.1 MGP_LPJ_G0017514.1 mouse_genomes_project 10 86950323 87219605 + MGP_LPJ_P0026566 Btbd11 protein_coding protein_coding MGP_LPJ_T0026567.1 MGP_LPJ_G0017514.1 mouse_genomes_project 10 87176305 87239293 + MGP_LPJ_P0026567 Btbd11 protein_coding protein_coding MGP_LPJ_T0026568.1 MGP_LPJ_G0017514.1 mouse_genomes_project 10 87176315 87183944 + Btbd11 protein_coding processed_transcript MGP_LPJ_T0026569.1 MGP_LPJ_G0017514.1 mouse_genomes_project 10 87208575 87220647 + Btbd11 protein_coding retained_intron MGP_LPJ_T0026570.1 MGP_LPJ_G0017514.1 mouse_genomes_project 10 87218583 87239290 + Btbd11 protein_coding processed_transcript MGP_LPJ_T0026571.1 MGP_LPJ_G0017514.1 mouse_genomes_project 10 87224211 87239293 + Btbd11 protein_coding retained_intron MGP_LPJ_T0026572.1 MGP_LPJ_G0017514.1 mouse_genomes_project 10 87233127 87237262 + Btbd11 protein_coding retained_intron MGP_LPJ_T0006090.1 MGP_LPJ_G0005099.1 mouse_genomes_project 10 6586634 6590973 - Gm28904 lincRNA lincRNA MGP_LPJ_T0024499.1 MGP_LPJ_G0016931.1 mouse_genomes_project 10 9597822 9760772 - MGP_LPJ_P0024499 Utrn protein_coding unknown_likely_coding MGP_LPJ_T0024500.1 MGP_LPJ_G0016931.1 mouse_genomes_project 10 9597824 10095460 - MGP_LPJ_P0024500 Utrn protein_coding protein_coding MGP_LPJ_T0100060.1 MGP_LPJ_G0038323.1 mouse_genomes_project 10 12350802 12350932 + Gm23892 snoRNA snoRNA MGP_LPJ_T0026703.1 MGP_LPJ_G0017549.1 mouse_genomes_project 10 91225002 91262989 - MGP_LPJ_P0026703 Gas2l3 protein_coding protein_coding MGP_LPJ_T0026704.1 MGP_LPJ_G0017549.1 mouse_genomes_project 10 91225002 91262989 - MGP_LPJ_P0026704 Gas2l3 protein_coding protein_coding MGP_LPJ_T0026217.1 MGP_LPJ_G0017420.1 mouse_genomes_project 10 81682617 81689325 - MGP_LPJ_P0026217 Abhd17a protein_coding protein_coding MGP_LPJ_T0026218.1 MGP_LPJ_G0017420.1 mouse_genomes_project 10 81682618 81689308 - MGP_LPJ_P0026218 Abhd17a protein_coding protein_coding MGP_LPJ_T0026219.1 MGP_LPJ_G0017420.1 mouse_genomes_project 10 81682619 81685588 - MGP_LPJ_P0026219 Abhd17a protein_coding protein_coding MGP_LPJ_T0026220.1 MGP_LPJ_G0017420.1 mouse_genomes_project 10 81685642 81689299 - MGP_LPJ_P0026220 Abhd17a protein_coding protein_coding MGP_LPJ_T0026121.1 MGP_LPJ_G0017399.1 mouse_genomes_project 10 81238243 81240840 + MGP_LPJ_P0026121 1600002K03Rik protein_coding protein_coding MGP_LPJ_T0012382.1 MGP_LPJ_G0010473.1 mouse_genomes_project 10 4878330 4880694 - processed_pseudogene processed_pseudogene MGP_LPJ_T0026563.1 MGP_LPJ_G0017512.1 mouse_genomes_project 10 86665762 86720790 - MGP_LPJ_P0026563 Cry1 protein_coding protein_coding MGP_LPJ_T0009643.1 MGP_LPJ_G0007761.1 mouse_genomes_project 10 124165418 124165538 - Mir763 miRNA miRNA MGP_LPJ_T0003074.1 MGP_LPJ_G0002872.1 mouse_genomes_project 10 80896607 80898614 - antisense antisense MGP_LPJ_T0003096.1 MGP_LPJ_G0002889.1 mouse_genomes_project 10 88599273 88600526 + Gm16280 antisense antisense MGP_LPJ_T0098103.1 MGP_LPJ_G0036384.1 mouse_genomes_project 10 28899947 28900041 - Gm24189 rRNA rRNA MGP_LPJ_T0024953.1 MGP_LPJ_G0017090.1 mouse_genomes_project 10 40115564 40120253 - Smpd2 protein_coding retained_intron MGP_LPJ_T0024956.1 MGP_LPJ_G0017090.1 mouse_genomes_project 10 40117094 40120044 - Smpd2 protein_coding retained_intron MGP_LPJ_T0024957.1 MGP_LPJ_G0017090.1 mouse_genomes_project 10 40117094 40120263 - MGP_LPJ_P0024957 Smpd2 protein_coding protein_coding MGP_LPJ_T0024958.1 MGP_LPJ_G0017090.1 mouse_genomes_project 10 40117100 40120253 - Smpd2 protein_coding retained_intron MGP_LPJ_T0024959.1 MGP_LPJ_G0017090.1 mouse_genomes_project 10 40117471 40118168 - Smpd2 protein_coding retained_intron MGP_LPJ_T0024960.1 MGP_LPJ_G0017090.1 mouse_genomes_project 10 40117561 40120020 - MGP_LPJ_P0024960 Smpd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0024961.1 MGP_LPJ_G0017090.1 mouse_genomes_project 10 40117953 40119602 - Smpd2 protein_coding retained_intron MGP_LPJ_T0024962.1 MGP_LPJ_G0017090.1 mouse_genomes_project 10 40118281 40120261 - Smpd2 protein_coding retained_intron MGP_LPJ_T0024963.1 MGP_LPJ_G0017090.1 mouse_genomes_project 10 40118939 40120292 - Smpd2 protein_coding retained_intron MGP_LPJ_T0025725.1 MGP_LPJ_G0017286.1 mouse_genomes_project 10 76749387 76762046 + MGP_LPJ_P0025725 Zfp280b protein_coding protein_coding MGP_LPJ_T0024549.1 MGP_LPJ_G0016941.1 mouse_genomes_project 10 10919665 11160639 - MGP_LPJ_P0024549 Aig1 protein_coding protein_coding MGP_LPJ_T0024550.1 MGP_LPJ_G0016941.1 mouse_genomes_project 10 10920280 11160481 - MGP_LPJ_P0024550 Aig1 protein_coding protein_coding MGP_LPJ_T0024551.1 MGP_LPJ_G0016941.1 mouse_genomes_project 10 10926529 11160616 - MGP_LPJ_P0024551 Aig1 protein_coding protein_coding MGP_LPJ_T0024552.1 MGP_LPJ_G0016941.1 mouse_genomes_project 10 10927666 11132384 - Aig1 protein_coding processed_transcript MGP_LPJ_T0024553.1 MGP_LPJ_G0016941.1 mouse_genomes_project 10 11086621 11152829 - Aig1 protein_coding retained_intron MGP_LPJ_T0024554.1 MGP_LPJ_G0016941.1 mouse_genomes_project 10 11114436 11160635 - Aig1 protein_coding retained_intron MGP_LPJ_T0024555.1 MGP_LPJ_G0016941.1 mouse_genomes_project 10 11117233 11160488 - Aig1 protein_coding processed_transcript MGP_LPJ_T0006142.1 MGP_LPJ_G0005139.1 mouse_genomes_project 10 86057412 86063313 - Platr7 lincRNA lincRNA MGP_LPJ_T0009602.1 MGP_LPJ_G0007720.1 mouse_genomes_project 10 60830010 60830109 - Gm44308 miRNA miRNA MGP_LPJ_T0006185.1 MGP_LPJ_G0005163.1 mouse_genomes_project 10 131349830 131357224 + F420014N23Rik lincRNA lincRNA MGP_LPJ_T0098839.1 MGP_LPJ_G0037102.1 mouse_genomes_project 10 47679321 47679405 - Gm24256 snRNA snRNA MGP_LPJ_T0098876.1 MGP_LPJ_G0037139.1 mouse_genomes_project 10 127328533 127328717 + Gm22958 snRNA snRNA MGP_LPJ_T0026040.1 MGP_LPJ_G0017381.1 mouse_genomes_project 10 80950516 80959253 - MGP_LPJ_P0026040 R3hdm4 protein_coding protein_coding MGP_LPJ_T0025953.1 MGP_LPJ_G0017358.1 mouse_genomes_project 10 80584404 80599925 - MGP_LPJ_P0025953 Theg protein_coding protein_coding MGP_LPJ_T0025954.1 MGP_LPJ_G0017358.1 mouse_genomes_project 10 80586834 80590478 - Theg protein_coding retained_intron MGP_LPJ_T0025955.1 MGP_LPJ_G0017358.1 mouse_genomes_project 10 80586834 80600120 - MGP_LPJ_P0025955 Theg protein_coding protein_coding MGP_LPJ_T0100066.1 MGP_LPJ_G0038329.1 mouse_genomes_project 10 25564035 25564107 + Gm23353 snoRNA snoRNA MGP_LPJ_T0026716.1 MGP_LPJ_G0017553.1 mouse_genomes_project 10 91554011 91574554 - MGP_LPJ_P0026716 Actr6 protein_coding protein_coding MGP_LPJ_T0100105.1 MGP_LPJ_G0038368.1 mouse_genomes_project 10 114549762 114549906 + Gm25117 snoRNA snoRNA MGP_LPJ_T0027539.1 MGP_LPJ_G0017840.1 mouse_genomes_project 10 134189835 134192789 + MGP_LPJ_P0027539 Olfr808 protein_coding protein_coding MGP_LPJ_T0027540.1 MGP_LPJ_G0017840.1 mouse_genomes_project 10 134191850 134192789 + MGP_LPJ_P0027540 Olfr808 protein_coding protein_coding MGP_LPJ_T0026939.1 MGP_LPJ_G0017615.1 mouse_genomes_project 10 106029189 106090185 + MGP_LPJ_P0026939 Slc6a15 protein_coding unknown_likely_coding MGP_LPJ_T0009639.1 MGP_LPJ_G0007757.1 mouse_genomes_project 10 110292209 110292338 + Gm44403 miRNA miRNA MGP_LPJ_T0026013.1 MGP_LPJ_G0017376.1 mouse_genomes_project 10 80893145 80909941 - MGP_LPJ_P0026013 Plppr3 protein_coding protein_coding MGP_LPJ_T0026016.1 MGP_LPJ_G0017376.1 mouse_genomes_project 10 80898958 80909737 - Plppr3 protein_coding retained_intron MGP_LPJ_T0026017.1 MGP_LPJ_G0017376.1 mouse_genomes_project 10 80898958 80909941 - Plppr3 protein_coding retained_intron MGP_LPJ_T0026018.1 MGP_LPJ_G0017376.1 mouse_genomes_project 10 80898958 80910005 - MGP_LPJ_P0026018 Plppr3 protein_coding protein_coding MGP_LPJ_T0026019.1 MGP_LPJ_G0017376.1 mouse_genomes_project 10 80900589 80901459 - Plppr3 protein_coding retained_intron MGP_LPJ_T0026020.1 MGP_LPJ_G0017376.1 mouse_genomes_project 10 80900609 80909595 - MGP_LPJ_P0026020 Plppr3 protein_coding protein_coding MGP_LPJ_T0026021.1 MGP_LPJ_G0017376.1 mouse_genomes_project 10 80900615 80909779 - MGP_LPJ_P0026021 Plppr3 protein_coding protein_coding MGP_LPJ_T0026022.1 MGP_LPJ_G0017376.1 mouse_genomes_project 10 80901031 80909760 - Plppr3 protein_coding processed_transcript MGP_LPJ_T0026023.1 MGP_LPJ_G0017376.1 mouse_genomes_project 10 80901085 80909770 - MGP_LPJ_P0026023 Plppr3 protein_coding protein_coding MGP_LPJ_T0026024.1 MGP_LPJ_G0017376.1 mouse_genomes_project 10 80901636 80909741 - MGP_LPJ_P0026024 Plppr3 protein_coding protein_coding MGP_LPJ_T0027069.1 MGP_LPJ_G0017661.1 mouse_genomes_project 10 120300392 120350860 - MGP_LPJ_P0027069 Rab3ip protein_coding protein_coding MGP_LPJ_T0027070.1 MGP_LPJ_G0017661.1 mouse_genomes_project 10 120301644 120350814 - MGP_LPJ_P0027070 Rab3ip protein_coding unknown_likely_coding MGP_LPJ_T0027459.1 MGP_LPJ_G0017789.1 mouse_genomes_project 10 133036560 133055773 - MGP_LPJ_P0027459 protein_coding protein_coding MGP_LPJ_T0025815.1 MGP_LPJ_G0017310.1 mouse_genomes_project 10 78381750 78400712 + MGP_LPJ_P0025815 Pttg1ip protein_coding protein_coding MGP_LPJ_T0025816.1 MGP_LPJ_G0017310.1 mouse_genomes_project 10 78381786 78389411 + Pttg1ip protein_coding retained_intron MGP_LPJ_T0025817.1 MGP_LPJ_G0017310.1 mouse_genomes_project 10 78381788 78395881 + MGP_LPJ_P0025817 Pttg1ip protein_coding nonsense_mediated_decay MGP_LPJ_T0025818.1 MGP_LPJ_G0017310.1 mouse_genomes_project 10 78381833 78399315 + MGP_LPJ_P0025818 Pttg1ip protein_coding protein_coding MGP_LPJ_T0025819.1 MGP_LPJ_G0017310.1 mouse_genomes_project 10 78381852 78394893 + MGP_LPJ_P0025819 Pttg1ip protein_coding nonsense_mediated_decay MGP_LPJ_T0025820.1 MGP_LPJ_G0017310.1 mouse_genomes_project 10 78382439 78399249 + MGP_LPJ_P0025820 Pttg1ip protein_coding protein_coding MGP_LPJ_T0025821.1 MGP_LPJ_G0017310.1 mouse_genomes_project 10 78383975 78394981 + MGP_LPJ_P0025821 Pttg1ip protein_coding protein_coding MGP_LPJ_T0025822.1 MGP_LPJ_G0017310.1 mouse_genomes_project 10 78391375 78399212 + Pttg1ip protein_coding retained_intron MGP_LPJ_T0025823.1 MGP_LPJ_G0017310.1 mouse_genomes_project 10 78394318 78399110 + Pttg1ip protein_coding retained_intron MGP_LPJ_T0003081.1 MGP_LPJ_G0002878.1 mouse_genomes_project 10 82346667 82350498 + Atcayos antisense antisense MGP_LPJ_T0003082.1 MGP_LPJ_G0002878.1 mouse_genomes_project 10 82346741 82361216 + Atcayos antisense antisense MGP_LPJ_T0003083.1 MGP_LPJ_G0002878.1 mouse_genomes_project 10 82346749 82362932 + Atcayos antisense antisense MGP_LPJ_T0025841.1 MGP_LPJ_G0017318.1 mouse_genomes_project 10 78532532 78532895 + MGP_LPJ_P0025841 Gm10100 protein_coding protein_coding MGP_LPJ_T0027449.1 MGP_LPJ_G0017786.1 mouse_genomes_project 10 132980122 132982100 - MGP_LPJ_P0027449 Rps26 protein_coding protein_coding MGP_LPJ_T0027492.1 MGP_LPJ_G0017808.1 mouse_genomes_project 10 133499454 133500393 - MGP_LPJ_P0027492 Olfr768 protein_coding protein_coding MGP_LPJ_T0025228.1 MGP_LPJ_G0017177.1 mouse_genomes_project 10 59577565 59675684 + MGP_LPJ_P0025228 Ascc1 protein_coding protein_coding MGP_LPJ_T0025229.1 MGP_LPJ_G0017177.1 mouse_genomes_project 10 59578087 59675684 + MGP_LPJ_P0025229 Ascc1 protein_coding protein_coding MGP_LPJ_T0027256.1 MGP_LPJ_G0017724.1 mouse_genomes_project 10 131351648 131366235 - MGP_LPJ_P0027256 Pip4k2c protein_coding protein_coding MGP_LPJ_T0025629.1 MGP_LPJ_G0017259.1 mouse_genomes_project 10 75579325 75657758 - MGP_LPJ_P0025629 Rsph14 protein_coding protein_coding MGP_LPJ_T0025630.1 MGP_LPJ_G0017259.1 mouse_genomes_project 10 75579325 75657746 - MGP_LPJ_P0025630 Rsph14 protein_coding protein_coding MGP_LPJ_T0025631.1 MGP_LPJ_G0017259.1 mouse_genomes_project 10 75579325 75657779 - MGP_LPJ_P0025631 Rsph14 protein_coding protein_coding MGP_LPJ_T0025632.1 MGP_LPJ_G0017259.1 mouse_genomes_project 10 75581534 75657746 - MGP_LPJ_P0025632 Rsph14 protein_coding protein_coding MGP_LPJ_T0025633.1 MGP_LPJ_G0017259.1 mouse_genomes_project 10 75583532 75657755 - MGP_LPJ_P0025633 Rsph14 protein_coding protein_coding MGP_LPJ_T0025637.1 MGP_LPJ_G0017259.1 mouse_genomes_project 10 75647369 75657724 - MGP_LPJ_P0025637 Rsph14 protein_coding protein_coding MGP_LPJ_T0025638.1 MGP_LPJ_G0017259.1 mouse_genomes_project 10 75649610 75657779 - Rsph14 protein_coding retained_intron MGP_LPJ_T0026279.1 MGP_LPJ_G0017443.1 mouse_genomes_project 10 82148339 82153930 - MGP_LPJ_P0026279 Diras1 protein_coding protein_coding MGP_LPJ_T0026280.1 MGP_LPJ_G0017443.1 mouse_genomes_project 10 82150841 82154183 - MGP_LPJ_P0026280 Diras1 protein_coding protein_coding MGP_LPJ_T0024442.1 MGP_LPJ_G0016915.1 mouse_genomes_project 10 4837480 4850503 - MGP_LPJ_P0024442 Ginm1 protein_coding protein_coding MGP_LPJ_T0024443.1 MGP_LPJ_G0016915.1 mouse_genomes_project 10 4837483 4840106 - Ginm1 protein_coding retained_intron MGP_LPJ_T0024444.1 MGP_LPJ_G0016915.1 mouse_genomes_project 10 4837489 4850477 - MGP_LPJ_P0024444 Ginm1 protein_coding protein_coding MGP_LPJ_T0024445.1 MGP_LPJ_G0016915.1 mouse_genomes_project 10 4848900 4862383 - Ginm1 protein_coding processed_transcript MGP_LPJ_T0024446.1 MGP_LPJ_G0016915.1 mouse_genomes_project 10 4861001 4862407 - Ginm1 protein_coding processed_transcript MGP_LPJ_T0024447.1 MGP_LPJ_G0016915.1 mouse_genomes_project 10 4862105 4862405 - MGP_LPJ_P0024447 Ginm1 protein_coding protein_coding MGP_LPJ_T0097971.1 MGP_LPJ_G0036252.1 mouse_genomes_project 10 76269565 76270077 - pseudogene pseudogene MGP_LPJ_T0026209.1 MGP_LPJ_G0017417.1 mouse_genomes_project 10 81614079 81634788 - MGP_LPJ_P0026209 Atp8b3 protein_coding protein_coding MGP_LPJ_T0026930.1 MGP_LPJ_G0017611.1 mouse_genomes_project 10 105081454 105091474 - MGP_LPJ_P0026930 Nts protein_coding protein_coding MGP_LPJ_T0024698.1 MGP_LPJ_G0016985.1 mouse_genomes_project 10 20685906 20688749 - MGP_LPJ_P0024698 Tcf21 protein_coding protein_coding MGP_LPJ_T0025553.1 MGP_LPJ_G0017250.1 mouse_genomes_project 10 70967169 71006933 - MGP_LPJ_P0025553 Phyhipl protein_coding protein_coding MGP_LPJ_T0025554.1 MGP_LPJ_G0017250.1 mouse_genomes_project 10 70967625 71066394 - MGP_LPJ_P0025554 Phyhipl protein_coding protein_coding MGP_LPJ_T0025555.1 MGP_LPJ_G0017250.1 mouse_genomes_project 10 70971787 71006908 - Phyhipl protein_coding retained_intron MGP_LPJ_T0025556.1 MGP_LPJ_G0017250.1 mouse_genomes_project 10 70975743 71007116 - Phyhipl protein_coding retained_intron MGP_LPJ_T0025557.1 MGP_LPJ_G0017250.1 mouse_genomes_project 10 70978831 71066401 - MGP_LPJ_P0025557 Phyhipl protein_coding protein_coding MGP_LPJ_T0025558.1 MGP_LPJ_G0017250.1 mouse_genomes_project 10 71008874 71062361 - Phyhipl protein_coding processed_transcript MGP_LPJ_T0025559.1 MGP_LPJ_G0017250.1 mouse_genomes_project 10 71008958 71066399 - Phyhipl protein_coding processed_transcript MGP_LPJ_T0025560.1 MGP_LPJ_G0017250.1 mouse_genomes_project 10 71014923 71015398 - Phyhipl protein_coding processed_transcript MGP_LPJ_T0025561.1 MGP_LPJ_G0017250.1 mouse_genomes_project 10 71015433 71035599 - Phyhipl protein_coding processed_transcript MGP_LPJ_T0024822.1 MGP_LPJ_G0017038.1 mouse_genomes_project 10 29574280 29683615 - MGP_LPJ_P0024822 Tpd52l1 protein_coding protein_coding MGP_LPJ_T0024823.1 MGP_LPJ_G0017038.1 mouse_genomes_project 10 29574741 29629781 - MGP_LPJ_P0024823 Tpd52l1 protein_coding unknown_likely_coding MGP_LPJ_T0024824.1 MGP_LPJ_G0017038.1 mouse_genomes_project 10 29574741 29619293 - MGP_LPJ_P0024824 Tpd52l1 protein_coding unknown_likely_coding MGP_LPJ_T0024701.1 MGP_LPJ_G0016987.1 mouse_genomes_project 10 21690668 21693421 - MGP_LPJ_P0024701 Rps12 protein_coding protein_coding MGP_LPJ_T0012428.1 MGP_LPJ_G0010519.1 mouse_genomes_project 10 82677701 82677995 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003051.1 MGP_LPJ_G0002853.1 mouse_genomes_project 10 41933337 41934097 + Gm29246 antisense antisense MGP_LPJ_T0027133.1 MGP_LPJ_G0017683.1 mouse_genomes_project 10 123769230 123800682 - MGP_LPJ_P0027133 Helb protein_coding protein_coding MGP_LPJ_T0027134.1 MGP_LPJ_G0017683.1 mouse_genomes_project 10 123770748 123779344 - Helb protein_coding retained_intron MGP_LPJ_T0027135.1 MGP_LPJ_G0017683.1 mouse_genomes_project 10 123770810 123800560 - MGP_LPJ_P0027135 Helb protein_coding nonsense_mediated_decay MGP_LPJ_T0025912.1 MGP_LPJ_G0017338.1 mouse_genomes_project 10 79381756 79385029 - MGP_LPJ_P0025912 Gm9978 protein_coding protein_coding MGP_LPJ_T0026604.1 MGP_LPJ_G0017525.1 mouse_genomes_project 10 88323452 88324895 + MGP_LPJ_P0026604 Gm5174 protein_coding protein_coding MGP_LPJ_T0000870.1 MGP_LPJ_G0000799.1 mouse_genomes_project 10 124392732 124396435 - TEC TEC MGP_LPJ_T0025999.1 MGP_LPJ_G0017375.1 mouse_genomes_project 10 80887097 80898612 + MGP_LPJ_P0025999 Ptbp1 protein_coding protein_coding MGP_LPJ_T0026000.1 MGP_LPJ_G0017375.1 mouse_genomes_project 10 80887275 80892383 + Ptbp1 protein_coding retained_intron MGP_LPJ_T0026001.1 MGP_LPJ_G0017375.1 mouse_genomes_project 10 80887299 80898949 + MGP_LPJ_P0026001 Ptbp1 protein_coding protein_coding MGP_LPJ_T0026002.1 MGP_LPJ_G0017375.1 mouse_genomes_project 10 80887303 80896489 + Ptbp1 protein_coding retained_intron MGP_LPJ_T0026003.1 MGP_LPJ_G0017375.1 mouse_genomes_project 10 80887311 80892284 + Ptbp1 protein_coding processed_transcript MGP_LPJ_T0026004.1 MGP_LPJ_G0017375.1 mouse_genomes_project 10 80887322 80896095 + MGP_LPJ_P0026004 Ptbp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0026005.1 MGP_LPJ_G0017375.1 mouse_genomes_project 10 80887335 80891685 + MGP_LPJ_P0026005 Ptbp1 protein_coding protein_coding MGP_LPJ_T0026006.1 MGP_LPJ_G0017375.1 mouse_genomes_project 10 80887337 80891715 + Ptbp1 protein_coding processed_transcript MGP_LPJ_T0026007.1 MGP_LPJ_G0017375.1 mouse_genomes_project 10 80887337 80892035 + MGP_LPJ_P0026007 Ptbp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0026008.1 MGP_LPJ_G0017375.1 mouse_genomes_project 10 80887338 80898539 + MGP_LPJ_P0026008 Ptbp1 protein_coding protein_coding MGP_LPJ_T0026009.1 MGP_LPJ_G0017375.1 mouse_genomes_project 10 80887708 80891767 + MGP_LPJ_P0026009 Ptbp1 protein_coding protein_coding MGP_LPJ_T0026010.1 MGP_LPJ_G0017375.1 mouse_genomes_project 10 80891442 80892058 + MGP_LPJ_P0026010 Ptbp1 protein_coding protein_coding MGP_LPJ_T0026011.1 MGP_LPJ_G0017375.1 mouse_genomes_project 10 80891664 80892796 + Ptbp1 protein_coding retained_intron MGP_LPJ_T0026012.1 MGP_LPJ_G0017375.1 mouse_genomes_project 10 80892320 80895724 + MGP_LPJ_P0026012 Ptbp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0026014.1 MGP_LPJ_G0017375.1 mouse_genomes_project 10 80894408 80895721 + Ptbp1 protein_coding retained_intron MGP_LPJ_T0026015.1 MGP_LPJ_G0017375.1 mouse_genomes_project 10 80894687 80898612 + Ptbp1 protein_coding retained_intron MGP_LPJ_T0024762.1 MGP_LPJ_G0017016.1 mouse_genomes_project 10 24016590 24113595 - MGP_LPJ_P0024762 Tmem200a protein_coding protein_coding MGP_LPJ_T0024831.1 MGP_LPJ_G0017042.1 mouse_genomes_project 10 31809685 31933479 - MGP_LPJ_P0024831 Clvs2 protein_coding protein_coding MGP_LPJ_T0024832.1 MGP_LPJ_G0017042.1 mouse_genomes_project 10 31848109 31932906 - Clvs2 protein_coding processed_transcript MGP_LPJ_T0024833.1 MGP_LPJ_G0017042.1 mouse_genomes_project 10 31901754 31933329 - Clvs2 protein_coding processed_transcript MGP_LPJ_T0024834.1 MGP_LPJ_G0017042.1 mouse_genomes_project 10 31906153 31933332 - MGP_LPJ_P0024834 Clvs2 protein_coding protein_coding MGP_LPJ_T0027241.1 MGP_LPJ_G0017718.1 mouse_genomes_project 10 131225629 131244385 + MGP_LPJ_P0027241 Agap2 protein_coding protein_coding MGP_LPJ_T0100050.1 MGP_LPJ_G0038313.1 mouse_genomes_project 10 1149241 1149373 + Gm25369 snoRNA snoRNA MGP_LPJ_T0024715.1 MGP_LPJ_G0016996.1 mouse_genomes_project 10 21906855 21907893 - MGP_LPJ_P0024715 Taar6 protein_coding protein_coding MGP_LPJ_T0098863.1 MGP_LPJ_G0037126.1 mouse_genomes_project 10 92907896 92907999 + Gm25390 snRNA snRNA MGP_LPJ_T0026062.1 MGP_LPJ_G0017390.1 mouse_genomes_project 10 81066833 81083207 + MGP_LPJ_P0026062 Hmha1 protein_coding protein_coding MGP_LPJ_T0026063.1 MGP_LPJ_G0017390.1 mouse_genomes_project 10 81066919 81083204 + Hmha1 protein_coding retained_intron MGP_LPJ_T0026064.1 MGP_LPJ_G0017390.1 mouse_genomes_project 10 81067096 81083204 + MGP_LPJ_P0026064 Hmha1 protein_coding protein_coding MGP_LPJ_T0026065.1 MGP_LPJ_G0017390.1 mouse_genomes_project 10 81071295 81083203 + MGP_LPJ_P0026065 Hmha1 protein_coding protein_coding MGP_LPJ_T0026066.1 MGP_LPJ_G0017390.1 mouse_genomes_project 10 81073385 81083197 + Hmha1 protein_coding retained_intron MGP_LPJ_T0009617.1 MGP_LPJ_G0007735.1 mouse_genomes_project 10 81461334 81461417 + Gm22721 miRNA miRNA MGP_LPJ_T0027548.1 MGP_LPJ_G0017846.1 mouse_genomes_project 10 134294716 134298871 + MGP_LPJ_P0027548 Olfr813 protein_coding protein_coding MGP_LPJ_T0098840.1 MGP_LPJ_G0037103.1 mouse_genomes_project 10 50335630 50335737 + Gm26257 snRNA snRNA MGP_LPJ_T0011288.1 MGP_LPJ_G0009406.1 mouse_genomes_project 10 62772070 62772353 + Gm22803 misc_RNA misc_RNA MGP_LPJ_T0026932.1 MGP_LPJ_G0017613.1 mouse_genomes_project 10 105645106 105667081 - MGP_LPJ_P0026932 Alx1 protein_coding protein_coding MGP_LPJ_T0026933.1 MGP_LPJ_G0017613.1 mouse_genomes_project 10 105645107 105666899 - MGP_LPJ_P0026933 Alx1 protein_coding protein_coding MGP_LPJ_T0026934.1 MGP_LPJ_G0017613.1 mouse_genomes_project 10 105645411 105660912 - Alx1 protein_coding processed_transcript MGP_LPJ_T0026874.1 MGP_LPJ_G0017588.1 mouse_genomes_project 10 98170319 98284911 + MGP_LPJ_P0026874 protein_coding protein_coding MGP_LPJ_T0098856.1 MGP_LPJ_G0037119.1 mouse_genomes_project 10 86128606 86128701 + Gm25657 snRNA snRNA MGP_LPJ_T0027348.1 MGP_LPJ_G0017754.1 mouse_genomes_project 10 132169514 132183010 + MGP_LPJ_P0027348 Sdr9c7 protein_coding protein_coding MGP_LPJ_T0027349.1 MGP_LPJ_G0017754.1 mouse_genomes_project 10 132169771 132182999 + Sdr9c7 protein_coding processed_transcript MGP_LPJ_T0027350.1 MGP_LPJ_G0017754.1 mouse_genomes_project 10 132173034 132181635 + Sdr9c7 protein_coding processed_transcript MGP_LPJ_T0027351.1 MGP_LPJ_G0017754.1 mouse_genomes_project 10 132174402 132181586 + Sdr9c7 protein_coding processed_transcript MGP_LPJ_T0025138.1 MGP_LPJ_G0017150.1 mouse_genomes_project 10 56944192 56971923 + MGP_LPJ_P0025138 Hsf2 protein_coding protein_coding MGP_LPJ_T0012385.1 MGP_LPJ_G0010476.1 mouse_genomes_project 10 11185860 11186868 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100085.1 MGP_LPJ_G0038348.1 mouse_genomes_project 10 66566924 66567054 + Gm22594 snoRNA snoRNA MGP_LPJ_T0024458.1 MGP_LPJ_G0016919.1 mouse_genomes_project 10 5290272 5614986 - MGP_LPJ_P0024458 Ust protein_coding protein_coding MGP_LPJ_T0025650.1 MGP_LPJ_G0017264.1 mouse_genomes_project 10 75956216 75975891 + MGP_LPJ_P0025650 Adora2a protein_coding protein_coding MGP_LPJ_T0100073.1 MGP_LPJ_G0038336.1 mouse_genomes_project 10 38786622 38786836 + Rnu3a snoRNA snoRNA MGP_LPJ_T0027007.1 MGP_LPJ_G0017640.1 mouse_genomes_project 10 115217057 115243966 + MGP_LPJ_P0027007 Glipr1l2 protein_coding protein_coding MGP_LPJ_T0027008.1 MGP_LPJ_G0017640.1 mouse_genomes_project 10 115217057 115243179 + MGP_LPJ_P0027008 Glipr1l2 protein_coding protein_coding MGP_LPJ_T0024910.1 MGP_LPJ_G0017071.1 mouse_genomes_project 10 38421581 38429216 - MGP_LPJ_P0024910 Mfsd4b2 protein_coding protein_coding MGP_LPJ_T0026717.1 MGP_LPJ_G0017554.1 mouse_genomes_project 10 91587113 91668065 + MGP_LPJ_P0026717 Uhrf1bp1l protein_coding protein_coding MGP_LPJ_T0012386.1 MGP_LPJ_G0010477.1 mouse_genomes_project 10 15267924 15268864 + processed_pseudogene processed_pseudogene MGP_LPJ_T0026988.1 MGP_LPJ_G0017631.1 mouse_genomes_project 10 113919338 113939995 + MGP_LPJ_P0026988 Csrp2 protein_coding protein_coding MGP_LPJ_T0025809.1 MGP_LPJ_G0017308.1 mouse_genomes_project 10 78277890 78311286 - MGP_LPJ_P0025809 Fam207a protein_coding protein_coding MGP_LPJ_T0026345.1 MGP_LPJ_G0017460.1 mouse_genomes_project 10 82431118 82449177 - MGP_LPJ_P0026345 Tjp3 protein_coding protein_coding MGP_LPJ_T0003031.1 MGP_LPJ_G0002838.1 mouse_genomes_project 10 11452512 11457204 - Gm28289 antisense antisense MGP_LPJ_T0026357.1 MGP_LPJ_G0017463.1 mouse_genomes_project 10 82488336 82494649 + MGP_LPJ_P0026357 Tbxa2r protein_coding protein_coding MGP_LPJ_T0009633.1 MGP_LPJ_G0007751.1 mouse_genomes_project 10 96689667 96689730 - Mir7211 miRNA miRNA MGP_LPJ_T0012426.1 MGP_LPJ_G0010517.1 mouse_genomes_project 10 80926349 80926599 + processed_pseudogene processed_pseudogene MGP_LPJ_T0026240.1 MGP_LPJ_G0017429.1 mouse_genomes_project 10 81870300 81913164 + MGP_LPJ_P0026240 Dot1l protein_coding protein_coding MGP_LPJ_T0026241.1 MGP_LPJ_G0017429.1 mouse_genomes_project 10 81870302 81912090 + MGP_LPJ_P0026241 Dot1l protein_coding nonsense_mediated_decay MGP_LPJ_T0026242.1 MGP_LPJ_G0017429.1 mouse_genomes_project 10 81870557 81881678 + Dot1l protein_coding retained_intron MGP_LPJ_T0026243.1 MGP_LPJ_G0017429.1 mouse_genomes_project 10 81894795 81912094 + MGP_LPJ_P0026243 Dot1l protein_coding protein_coding MGP_LPJ_T0026244.1 MGP_LPJ_G0017429.1 mouse_genomes_project 10 81902396 81903654 + Dot1l protein_coding retained_intron MGP_LPJ_T0026245.1 MGP_LPJ_G0017429.1 mouse_genomes_project 10 81906295 81912050 + MGP_LPJ_P0026245 Dot1l protein_coding nonsense_mediated_decay MGP_LPJ_T0026246.1 MGP_LPJ_G0017429.1 mouse_genomes_project 10 81909156 81911521 + MGP_LPJ_P0026246 Dot1l protein_coding protein_coding MGP_LPJ_T0025715.1 MGP_LPJ_G0017282.1 mouse_genomes_project 10 76623858 76624630 - MGP_LPJ_P0025715 Mmp11 protein_coding nonsense_mediated_decay MGP_LPJ_T0025716.1 MGP_LPJ_G0017282.1 mouse_genomes_project 10 76623858 76633112 - MGP_LPJ_P0025716 Mmp11 protein_coding protein_coding MGP_LPJ_T0025717.1 MGP_LPJ_G0017282.1 mouse_genomes_project 10 76623858 76633139 - MGP_LPJ_P0025717 Mmp11 protein_coding protein_coding MGP_LPJ_T0025718.1 MGP_LPJ_G0017282.1 mouse_genomes_project 10 76623859 76627049 - MGP_LPJ_P0025718 Mmp11 protein_coding protein_coding MGP_LPJ_T0025719.1 MGP_LPJ_G0017282.1 mouse_genomes_project 10 76627396 76628327 - Mmp11 protein_coding retained_intron MGP_LPJ_T0026642.1 MGP_LPJ_G0017536.1 mouse_genomes_project 10 89837612 89890673 - MGP_LPJ_P0026642 Parpbp protein_coding protein_coding MGP_LPJ_T0026643.1 MGP_LPJ_G0017536.1 mouse_genomes_project 10 89869981 89890610 - MGP_LPJ_P0026643 Parpbp protein_coding protein_coding MGP_LPJ_T0026644.1 MGP_LPJ_G0017536.1 mouse_genomes_project 10 89870001 89890665 - MGP_LPJ_P0026644 Parpbp protein_coding protein_coding MGP_LPJ_T0026645.1 MGP_LPJ_G0017536.1 mouse_genomes_project 10 89877464 89890610 - MGP_LPJ_P0026645 Parpbp protein_coding protein_coding MGP_LPJ_T0027304.1 MGP_LPJ_G0017736.1 mouse_genomes_project 10 131705540 131707754 + MGP_LPJ_P0027304 Ndufa4l2 protein_coding protein_coding MGP_LPJ_T0003047.1 MGP_LPJ_G0002849.1 mouse_genomes_project 10 40192980 40195771 + Gm17196 antisense antisense MGP_LPJ_T0006177.1 MGP_LPJ_G0005158.1 mouse_genomes_project 10 120044041 120053164 + lincRNA lincRNA MGP_LPJ_T0012396.1 MGP_LPJ_G0010487.1 mouse_genomes_project 10 23857721 23858331 - processed_pseudogene processed_pseudogene MGP_LPJ_T0024667.1 MGP_LPJ_G0016975.1 mouse_genomes_project 10 18888694 18890917 + MGP_LPJ_P0024667 Hbs1l protein_coding protein_coding MGP_LPJ_T0024668.1 MGP_LPJ_G0016975.1 mouse_genomes_project 10 18888694 18964045 + MGP_LPJ_P0024668 Hbs1l protein_coding protein_coding MGP_LPJ_T0027021.1 MGP_LPJ_G0017648.1 mouse_genomes_project 10 118574656 118600385 - MGP_LPJ_P0027021 Rab21 protein_coding protein_coding MGP_LPJ_T0025063.1 MGP_LPJ_G0017119.1 mouse_genomes_project 10 44092642 44243168 + MGP_LPJ_P0025063 Popdc3 protein_coding protein_coding MGP_LPJ_T0025064.1 MGP_LPJ_G0017119.1 mouse_genomes_project 10 44216852 44246506 + MGP_LPJ_P0025064 Popdc3 protein_coding protein_coding MGP_LPJ_T0025065.1 MGP_LPJ_G0017119.1 mouse_genomes_project 10 44216949 44246171 + MGP_LPJ_P0025065 Popdc3 protein_coding protein_coding MGP_LPJ_T0026530.1 MGP_LPJ_G0017501.1 mouse_genomes_project 10 85055845 85106263 - MGP_LPJ_P0026530 Appl2 protein_coding protein_coding MGP_LPJ_T0026531.1 MGP_LPJ_G0017501.1 mouse_genomes_project 10 85056209 85058943 - MGP_LPJ_P0026531 Appl2 protein_coding protein_coding MGP_LPJ_T0026532.1 MGP_LPJ_G0017501.1 mouse_genomes_project 10 85056554 85065603 - MGP_LPJ_P0026532 Appl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0026533.1 MGP_LPJ_G0017501.1 mouse_genomes_project 10 85057716 85059197 - Appl2 protein_coding retained_intron MGP_LPJ_T0026534.1 MGP_LPJ_G0017501.1 mouse_genomes_project 10 85058579 85068476 - Appl2 protein_coding retained_intron MGP_LPJ_T0026535.1 MGP_LPJ_G0017501.1 mouse_genomes_project 10 85058683 85067863 - Appl2 protein_coding retained_intron MGP_LPJ_T0026536.1 MGP_LPJ_G0017501.1 mouse_genomes_project 10 85061121 85106195 - Appl2 protein_coding retained_intron MGP_LPJ_T0026537.1 MGP_LPJ_G0017501.1 mouse_genomes_project 10 85061241 85068323 - Appl2 protein_coding retained_intron MGP_LPJ_T0026538.1 MGP_LPJ_G0017501.1 mouse_genomes_project 10 85065201 85067697 - Appl2 protein_coding retained_intron MGP_LPJ_T0026539.1 MGP_LPJ_G0017501.1 mouse_genomes_project 10 85070853 85084897 - Appl2 protein_coding processed_transcript MGP_LPJ_T0026540.1 MGP_LPJ_G0017501.1 mouse_genomes_project 10 85074013 85106190 - MGP_LPJ_P0026540 Appl2 protein_coding protein_coding MGP_LPJ_T0026541.1 MGP_LPJ_G0017501.1 mouse_genomes_project 10 85077307 85106128 - MGP_LPJ_P0026541 Appl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0026542.1 MGP_LPJ_G0017501.1 mouse_genomes_project 10 85077421 85094038 - Appl2 protein_coding processed_transcript MGP_LPJ_T0026543.1 MGP_LPJ_G0017501.1 mouse_genomes_project 10 85081240 85106200 - MGP_LPJ_P0026543 Appl2 protein_coding protein_coding MGP_LPJ_T0006106.1 MGP_LPJ_G0005110.1 mouse_genomes_project 10 22082185 22088429 + Gm15137 lincRNA lincRNA MGP_LPJ_T0027240.1 MGP_LPJ_G0017717.1 mouse_genomes_project 10 131214064 131217011 - MGP_LPJ_P0027240 Tspan31 protein_coding protein_coding MGP_LPJ_T0027074.1 MGP_LPJ_G0017665.1 mouse_genomes_project 10 120461110 120473941 - MGP_LPJ_P0027074 Cct2 protein_coding protein_coding MGP_LPJ_T0024360.1 MGP_LPJ_G0016900.1 mouse_genomes_project 10 2600691 2614539 + MGP_LPJ_P0024360 Myct1 protein_coding protein_coding MGP_LPJ_T0024619.1 MGP_LPJ_G0016961.1 mouse_genomes_project 10 17121780 17140390 + MGP_LPJ_P0024619 Ifngr1 protein_coding protein_coding MGP_LPJ_T0024620.1 MGP_LPJ_G0016961.1 mouse_genomes_project 10 17121789 17127682 + Ifngr1 protein_coding retained_intron MGP_LPJ_T0024621.1 MGP_LPJ_G0016961.1 mouse_genomes_project 10 17121862 17133918 + MGP_LPJ_P0024621 Ifngr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024622.1 MGP_LPJ_G0016961.1 mouse_genomes_project 10 17121884 17131668 + MGP_LPJ_P0024622 Ifngr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024623.1 MGP_LPJ_G0016961.1 mouse_genomes_project 10 17121893 17133938 + MGP_LPJ_P0024623 Ifngr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024624.1 MGP_LPJ_G0016961.1 mouse_genomes_project 10 17136082 17139416 + Ifngr1 protein_coding retained_intron MGP_LPJ_T0025760.1 MGP_LPJ_G0017298.1 mouse_genomes_project 10 77309688 77327653 + MGP_LPJ_P0025760 Ftcd protein_coding protein_coding MGP_LPJ_T0025761.1 MGP_LPJ_G0017298.1 mouse_genomes_project 10 77309692 77328430 + Ftcd protein_coding retained_intron MGP_LPJ_T0025762.1 MGP_LPJ_G0017298.1 mouse_genomes_project 10 77309746 77327404 + MGP_LPJ_P0025762 Ftcd protein_coding unknown_likely_coding MGP_LPJ_T0025763.1 MGP_LPJ_G0017298.1 mouse_genomes_project 10 77324545 77326660 + Ftcd protein_coding processed_transcript MGP_LPJ_T0024980.1 MGP_LPJ_G0017095.1 mouse_genomes_project 10 40296130 40350309 - MGP_LPJ_P0024980 protein_coding protein_coding MGP_LPJ_T0027266.1 MGP_LPJ_G0017728.1 mouse_genomes_project 10 131451326 131456842 + MGP_LPJ_P0027266 Ddit3 protein_coding protein_coding MGP_LPJ_T0027267.1 MGP_LPJ_G0017728.1 mouse_genomes_project 10 131451345 131456619 + MGP_LPJ_P0027267 Ddit3 protein_coding protein_coding MGP_LPJ_T0027268.1 MGP_LPJ_G0017728.1 mouse_genomes_project 10 131451346 131455136 + Ddit3 protein_coding retained_intron MGP_LPJ_T0006164.1 MGP_LPJ_G0005148.1 mouse_genomes_project 10 95950887 95955586 + 4930471D02Rik lincRNA lincRNA MGP_LPJ_T0098468.1 MGP_LPJ_G0036748.1 mouse_genomes_project 10 74048494 74076393 + Gm15397 sense_intronic sense_intronic MGP_LPJ_T0024654.1 MGP_LPJ_G0016971.1 mouse_genomes_project 10 17894711 17910850 + MGP_LPJ_P0024654 Mtfr2 protein_coding protein_coding MGP_LPJ_T0003075.1 MGP_LPJ_G0002873.1 mouse_genomes_project 10 81352994 81353557 - Gm15122 antisense antisense MGP_LPJ_T0025692.1 MGP_LPJ_G0017272.1 mouse_genomes_project 10 76327083 76449708 - MGP_LPJ_P0025692 Cabin1 protein_coding protein_coding MGP_LPJ_T0026049.1 MGP_LPJ_G0017386.1 mouse_genomes_project 10 81019039 81025515 + MGP_LPJ_P0026049 Grin3b protein_coding protein_coding MGP_LPJ_T0026050.1 MGP_LPJ_G0017386.1 mouse_genomes_project 10 81022061 81025040 + MGP_LPJ_P0026050 Grin3b protein_coding protein_coding MGP_LPJ_T0026051.1 MGP_LPJ_G0017386.1 mouse_genomes_project 10 81022733 81025449 + MGP_LPJ_P0026051 Grin3b protein_coding protein_coding MGP_LPJ_T0009615.1 MGP_LPJ_G0007733.1 mouse_genomes_project 10 80895257 80895323 + Mir6910 miRNA miRNA MGP_LPJ_T0025727.1 MGP_LPJ_G0017288.1 mouse_genomes_project 10 76887777 76930430 + MGP_LPJ_P0025727 Slc5a4a protein_coding protein_coding MGP_LPJ_T0006167.1 MGP_LPJ_G0005151.1 mouse_genomes_project 10 97959837 98018135 + 4732465J04Rik lincRNA lincRNA MGP_LPJ_T0006168.1 MGP_LPJ_G0005151.1 mouse_genomes_project 10 97996524 98018540 + 4732465J04Rik lincRNA lincRNA MGP_LPJ_T0100102.1 MGP_LPJ_G0038365.1 mouse_genomes_project 10 111237585 111237719 + Gm23105 snoRNA snoRNA MGP_LPJ_T0024531.1 MGP_LPJ_G0016937.1 mouse_genomes_project 10 10464315 10588857 - MGP_LPJ_P0024531 Phactr2 protein_coding protein_coding MGP_LPJ_T0024532.1 MGP_LPJ_G0016937.1 mouse_genomes_project 10 10469945 10657886 - MGP_LPJ_P0024532 Phactr2 protein_coding protein_coding MGP_LPJ_T0024533.1 MGP_LPJ_G0016937.1 mouse_genomes_project 10 10469945 10744137 - MGP_LPJ_P0024533 Phactr2 protein_coding protein_coding MGP_LPJ_T0024534.1 MGP_LPJ_G0016937.1 mouse_genomes_project 10 10469947 10588986 - MGP_LPJ_P0024534 Phactr2 protein_coding protein_coding MGP_LPJ_T0024535.1 MGP_LPJ_G0016937.1 mouse_genomes_project 10 10470808 10658103 - MGP_LPJ_P0024535 Phactr2 protein_coding protein_coding MGP_LPJ_T0024536.1 MGP_LPJ_G0016937.1 mouse_genomes_project 10 10650538 10657864 - Phactr2 protein_coding processed_transcript MGP_LPJ_T0026614.1 MGP_LPJ_G0017527.1 mouse_genomes_project 10 88377653 88456522 + MGP_LPJ_P0026614 Ttc41 protein_coding protein_coding MGP_LPJ_T0026615.1 MGP_LPJ_G0017527.1 mouse_genomes_project 10 88377653 88398032 + MGP_LPJ_P0026615 Ttc41 protein_coding protein_coding MGP_LPJ_T0025236.1 MGP_LPJ_G0017180.1 mouse_genomes_project 10 59893280 59921968 + MGP_LPJ_P0025236 Psap protein_coding protein_coding MGP_LPJ_T0025237.1 MGP_LPJ_G0017180.1 mouse_genomes_project 10 59893281 59921971 + MGP_LPJ_P0025237 Psap protein_coding protein_coding MGP_LPJ_T0025238.1 MGP_LPJ_G0017180.1 mouse_genomes_project 10 59893281 59921971 + MGP_LPJ_P0025238 Psap protein_coding protein_coding MGP_LPJ_T0025239.1 MGP_LPJ_G0017180.1 mouse_genomes_project 10 59901964 59921971 + MGP_LPJ_P0025239 Psap protein_coding protein_coding MGP_LPJ_T0027177.1 MGP_LPJ_G0017699.1 mouse_genomes_project 10 125619231 125909292 - MGP_LPJ_P0027177 Srgap1 protein_coding protein_coding MGP_LPJ_T0027178.1 MGP_LPJ_G0017699.1 mouse_genomes_project 10 125619231 125909285 - MGP_LPJ_P0027178 Srgap1 protein_coding protein_coding MGP_LPJ_T0027179.1 MGP_LPJ_G0017699.1 mouse_genomes_project 10 125623468 125645380 - Srgap1 protein_coding processed_transcript MGP_LPJ_T0027180.1 MGP_LPJ_G0017699.1 mouse_genomes_project 10 125644914 125663332 - MGP_LPJ_P0027180 Srgap1 protein_coding protein_coding MGP_LPJ_T0027181.1 MGP_LPJ_G0017699.1 mouse_genomes_project 10 125748237 125909292 - Srgap1 protein_coding retained_intron MGP_LPJ_T0026067.1 MGP_LPJ_G0017391.1 mouse_genomes_project 10 81087683 81088920 - Polr2e protein_coding retained_intron MGP_LPJ_T0026068.1 MGP_LPJ_G0017391.1 mouse_genomes_project 10 81087683 81091445 - Polr2e protein_coding retained_intron MGP_LPJ_T0026069.1 MGP_LPJ_G0017391.1 mouse_genomes_project 10 81087683 81091530 - MGP_LPJ_P0026069 Polr2e protein_coding protein_coding MGP_LPJ_T0026070.1 MGP_LPJ_G0017391.1 mouse_genomes_project 10 81087685 81091385 - Polr2e protein_coding retained_intron MGP_LPJ_T0026071.1 MGP_LPJ_G0017391.1 mouse_genomes_project 10 81087909 81091436 - Polr2e protein_coding retained_intron MGP_LPJ_T0017068.1 MGP_LPJ_G0015052.1 mouse_genomes_project 10 80884051 80887627 - E130317F20Rik processed_transcript processed_transcript MGP_LPJ_T0024462.1 MGP_LPJ_G0016922.1 mouse_genomes_project 10 6750207 6798285 - MGP_LPJ_P0024462 Samd5 protein_coding protein_coding MGP_LPJ_T0009657.1 MGP_LPJ_G0007775.1 mouse_genomes_project 10 132729065 132729141 + Gm25361 miRNA miRNA MGP_LPJ_T0098855.1 MGP_LPJ_G0037118.1 mouse_genomes_project 10 84578659 84578762 - Gm23122 snRNA snRNA MGP_LPJ_T0012424.1 MGP_LPJ_G0010515.1 mouse_genomes_project 10 76648453 76648846 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003034.1 MGP_LPJ_G0002841.1 mouse_genomes_project 10 15238683 15243491 - Gm20655 antisense antisense MGP_LPJ_T0003035.1 MGP_LPJ_G0002841.1 mouse_genomes_project 10 15241267 15248082 - Gm20655 antisense antisense MGP_LPJ_T0009585.1 MGP_LPJ_G0007703.1 mouse_genomes_project 10 9127160 9127247 + Gm22194 miRNA miRNA MGP_LPJ_T0012411.1 MGP_LPJ_G0010502.1 mouse_genomes_project 10 57260459 57260907 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012433.1 MGP_LPJ_G0010524.1 mouse_genomes_project 10 105060602 105061547 + processed_pseudogene processed_pseudogene MGP_LPJ_T0025935.1 MGP_LPJ_G0017353.1 mouse_genomes_project 10 80349966 80371293 + MGP_LPJ_P0025935 protein_coding protein_coding MGP_LPJ_T0098850.1 MGP_LPJ_G0037113.1 mouse_genomes_project 10 76292861 76292974 - Gm26402 snRNA snRNA MGP_LPJ_T0026462.1 MGP_LPJ_G0017482.1 mouse_genomes_project 10 82818623 82828343 + MGP_LPJ_P0026462 Ankrd24 protein_coding protein_coding MGP_LPJ_T0026463.1 MGP_LPJ_G0017482.1 mouse_genomes_project 10 82818662 82819791 + MGP_LPJ_P0026463 Ankrd24 protein_coding protein_coding MGP_LPJ_T0026464.1 MGP_LPJ_G0017482.1 mouse_genomes_project 10 82818716 82837667 + MGP_LPJ_P0026464 Ankrd24 protein_coding protein_coding MGP_LPJ_T0026465.1 MGP_LPJ_G0017482.1 mouse_genomes_project 10 82818789 82819786 + MGP_LPJ_P0026465 Ankrd24 protein_coding protein_coding MGP_LPJ_T0026466.1 MGP_LPJ_G0017482.1 mouse_genomes_project 10 82823742 82833066 + MGP_LPJ_P0026466 Ankrd24 protein_coding nonsense_mediated_decay MGP_LPJ_T0026467.1 MGP_LPJ_G0017482.1 mouse_genomes_project 10 82823746 82837664 + Ankrd24 protein_coding retained_intron MGP_LPJ_T0026468.1 MGP_LPJ_G0017482.1 mouse_genomes_project 10 82823746 82826464 + MGP_LPJ_P0026468 Ankrd24 protein_coding protein_coding MGP_LPJ_T0026469.1 MGP_LPJ_G0017482.1 mouse_genomes_project 10 82823752 82825941 + Ankrd24 protein_coding retained_intron MGP_LPJ_T0026470.1 MGP_LPJ_G0017482.1 mouse_genomes_project 10 82823752 82829942 + MGP_LPJ_P0026470 Ankrd24 protein_coding protein_coding MGP_LPJ_T0026471.1 MGP_LPJ_G0017482.1 mouse_genomes_project 10 82823760 82830286 + MGP_LPJ_P0026471 Ankrd24 protein_coding protein_coding MGP_LPJ_T0026472.1 MGP_LPJ_G0017482.1 mouse_genomes_project 10 82830974 82833006 + MGP_LPJ_P0026472 Ankrd24 protein_coding nonsense_mediated_decay MGP_LPJ_T0026473.1 MGP_LPJ_G0017482.1 mouse_genomes_project 10 82830986 82836024 + Ankrd24 protein_coding retained_intron MGP_LPJ_T0026474.1 MGP_LPJ_G0017482.1 mouse_genomes_project 10 82833857 82837531 + MGP_LPJ_P0026474 Ankrd24 protein_coding protein_coding MGP_LPJ_T0026475.1 MGP_LPJ_G0017482.1 mouse_genomes_project 10 82836688 82837218 + Ankrd24 protein_coding retained_intron MGP_LPJ_T0100109.1 MGP_LPJ_G0038372.1 mouse_genomes_project 10 130950883 130951021 - Gm24179 snoRNA snoRNA MGP_LPJ_T0024564.1 MGP_LPJ_G0016944.1 mouse_genomes_project 10 11985512 12041572 - MGP_LPJ_P0024564 Vta1 protein_coding protein_coding MGP_LPJ_T0024565.1 MGP_LPJ_G0016944.1 mouse_genomes_project 10 11986112 12041512 - MGP_LPJ_P0024565 Vta1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024566.1 MGP_LPJ_G0016944.1 mouse_genomes_project 10 11986420 11998303 - Vta1 protein_coding retained_intron MGP_LPJ_T0024567.1 MGP_LPJ_G0016944.1 mouse_genomes_project 10 11986545 12041471 - MGP_LPJ_P0024567 Vta1 protein_coding protein_coding MGP_LPJ_T0024568.1 MGP_LPJ_G0016944.1 mouse_genomes_project 10 11986596 12017993 - MGP_LPJ_P0024568 Vta1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024569.1 MGP_LPJ_G0016944.1 mouse_genomes_project 10 12018792 12041477 - Vta1 protein_coding processed_transcript MGP_LPJ_T0003030.1 MGP_LPJ_G0002837.1 mouse_genomes_project 10 8381025 8381725 - Gm16577 antisense antisense MGP_LPJ_T0003077.1 MGP_LPJ_G0002875.1 mouse_genomes_project 10 81448515 81449777 + Gm15124 antisense antisense MGP_LPJ_T0011296.1 MGP_LPJ_G0009414.1 mouse_genomes_project 10 94058056 94058259 - Gm27753 misc_RNA misc_RNA MGP_LPJ_T0025896.1 MGP_LPJ_G0017332.1 mouse_genomes_project 10 79047425 79061669 - MGP_LPJ_P0025896 Pwp2 protein_coding protein_coding MGP_LPJ_T0024934.1 MGP_LPJ_G0017083.1 mouse_genomes_project 10 39428698 39483342 - MGP_LPJ_P0024934 Cdc40 protein_coding protein_coding MGP_LPJ_T0025202.1 MGP_LPJ_G0017173.1 mouse_genomes_project 10 59253682 59425249 + MGP_LPJ_P0025202 Micu1 protein_coding protein_coding MGP_LPJ_T0025203.1 MGP_LPJ_G0017173.1 mouse_genomes_project 10 59253768 59297081 + Micu1 protein_coding retained_intron MGP_LPJ_T0025204.1 MGP_LPJ_G0017173.1 mouse_genomes_project 10 59253804 59425247 + MGP_LPJ_P0025204 Micu1 protein_coding protein_coding MGP_LPJ_T0025205.1 MGP_LPJ_G0017173.1 mouse_genomes_project 10 59253823 59425247 + MGP_LPJ_P0025205 Micu1 protein_coding protein_coding MGP_LPJ_T0025206.1 MGP_LPJ_G0017173.1 mouse_genomes_project 10 59253833 59425240 + MGP_LPJ_P0025206 Micu1 protein_coding protein_coding MGP_LPJ_T0025207.1 MGP_LPJ_G0017173.1 mouse_genomes_project 10 59253854 59344224 + MGP_LPJ_P0025207 Micu1 protein_coding protein_coding MGP_LPJ_T0025208.1 MGP_LPJ_G0017173.1 mouse_genomes_project 10 59253863 59303890 + Micu1 protein_coding retained_intron MGP_LPJ_T0025209.1 MGP_LPJ_G0017173.1 mouse_genomes_project 10 59292268 59292943 + Micu1 protein_coding processed_transcript MGP_LPJ_T0025210.1 MGP_LPJ_G0017173.1 mouse_genomes_project 10 59292958 59309359 + MGP_LPJ_P0025210 Micu1 protein_coding protein_coding MGP_LPJ_T0025211.1 MGP_LPJ_G0017173.1 mouse_genomes_project 10 59314597 59344322 + Micu1 protein_coding processed_transcript MGP_LPJ_T0025212.1 MGP_LPJ_G0017173.1 mouse_genomes_project 10 59389963 59405175 + Micu1 protein_coding retained_intron MGP_LPJ_T0025213.1 MGP_LPJ_G0017173.1 mouse_genomes_project 10 59421339 59424520 + Micu1 protein_coding retained_intron MGP_LPJ_T0100115.1 MGP_LPJ_G0038378.1 mouse_genomes_project 10 134110801 134110925 + Gm24717 snoRNA snoRNA MGP_LPJ_T0006178.1 MGP_LPJ_G0005159.1 mouse_genomes_project 10 120106316 120112211 - 1700030O20Rik lincRNA lincRNA MGP_LPJ_T0026216.1 MGP_LPJ_G0017419.1 mouse_genomes_project 10 81665955 81676147 - MGP_LPJ_P0026216 Klf16 protein_coding protein_coding MGP_LPJ_T0025106.1 MGP_LPJ_G0017135.1 mouse_genomes_project 10 51554661 51618153 - MGP_LPJ_P0025106 Gopc protein_coding protein_coding MGP_LPJ_T0025107.1 MGP_LPJ_G0017135.1 mouse_genomes_project 10 51554661 51618153 - MGP_LPJ_P0025107 Gopc protein_coding protein_coding MGP_LPJ_T0025108.1 MGP_LPJ_G0017135.1 mouse_genomes_project 10 51557360 51617927 - MGP_LPJ_P0025108 Gopc protein_coding unknown_likely_coding MGP_LPJ_T0027470.1 MGP_LPJ_G0017797.1 mouse_genomes_project 10 133184437 133188604 - MGP_LPJ_P0027470 Ormdl2 protein_coding protein_coding MGP_LPJ_T0025439.1 MGP_LPJ_G0017231.1 mouse_genomes_project 10 63889132 64063229 - MGP_LPJ_P0025439 Lrrtm3 protein_coding protein_coding MGP_LPJ_T0025440.1 MGP_LPJ_G0017231.1 mouse_genomes_project 10 63890543 64063232 - Lrrtm3 protein_coding processed_transcript MGP_LPJ_T0025441.1 MGP_LPJ_G0017231.1 mouse_genomes_project 10 64060451 64063202 - Lrrtm3 protein_coding retained_intron MGP_LPJ_T0025442.1 MGP_LPJ_G0017231.1 mouse_genomes_project 10 64062010 64063205 - MGP_LPJ_P0025442 Lrrtm3 protein_coding protein_coding MGP_LPJ_T0024543.1 MGP_LPJ_G0016939.1 mouse_genomes_project 10 10793627 10828359 - MGP_LPJ_P0024543 Pex3 protein_coding protein_coding MGP_LPJ_T0024544.1 MGP_LPJ_G0016939.1 mouse_genomes_project 10 10794670 10828115 - MGP_LPJ_P0024544 Pex3 protein_coding protein_coding MGP_LPJ_T0024545.1 MGP_LPJ_G0016939.1 mouse_genomes_project 10 10799399 10806400 - Pex3 protein_coding retained_intron MGP_LPJ_T0024546.1 MGP_LPJ_G0016939.1 mouse_genomes_project 10 10801704 10828081 - Pex3 protein_coding processed_transcript MGP_LPJ_T0024547.1 MGP_LPJ_G0016939.1 mouse_genomes_project 10 10806165 10828036 - Pex3 protein_coding processed_transcript MGP_LPJ_T0027164.1 MGP_LPJ_G0017692.1 mouse_genomes_project 10 125040692 125090758 - MGP_LPJ_P0027164 Tbc1d30 protein_coding protein_coding MGP_LPJ_T0026247.1 MGP_LPJ_G0017430.1 mouse_genomes_project 10 81913802 81916327 - MGP_LPJ_P0026247 Plekhj1 protein_coding protein_coding MGP_LPJ_T0025129.1 MGP_LPJ_G0017145.1 mouse_genomes_project 10 53166398 53351790 - MGP_LPJ_P0025129 Man1a protein_coding protein_coding MGP_LPJ_T0025130.1 MGP_LPJ_G0017145.1 mouse_genomes_project 10 53168625 53351703 - MGP_LPJ_P0025130 Man1a protein_coding protein_coding MGP_LPJ_T0025131.1 MGP_LPJ_G0017145.1 mouse_genomes_project 10 53240522 53351703 - Man1a protein_coding retained_intron MGP_LPJ_T0025132.1 MGP_LPJ_G0017145.1 mouse_genomes_project 10 53270949 53351730 - MGP_LPJ_P0025132 Man1a protein_coding protein_coding MGP_LPJ_T0025133.1 MGP_LPJ_G0017145.1 mouse_genomes_project 10 53279080 53351731 - Man1a protein_coding retained_intron MGP_LPJ_T0027555.1 MGP_LPJ_G0017852.1 mouse_genomes_project 10 134521029 134522090 + MGP_LPJ_P0027555 Olfr820 protein_coding protein_coding MGP_LPJ_T0026955.1 MGP_LPJ_G0017620.1 mouse_genomes_project 10 109715678 109922922 - MGP_LPJ_P0026955 Acss3 protein_coding protein_coding MGP_LPJ_T0026956.1 MGP_LPJ_G0017620.1 mouse_genomes_project 10 109753224 109922922 - MGP_LPJ_P0026956 Acss3 protein_coding protein_coding MGP_LPJ_T0026957.1 MGP_LPJ_G0017620.1 mouse_genomes_project 10 109904289 109922903 - Acss3 protein_coding processed_transcript MGP_LPJ_T0098858.1 MGP_LPJ_G0037121.1 mouse_genomes_project 10 87663547 87663651 - Gm24430 snRNA snRNA MGP_LPJ_T0027403.1 MGP_LPJ_G0017767.1 mouse_genomes_project 10 132580708 132582863 + MGP_LPJ_P0027403 Apof protein_coding protein_coding MGP_LPJ_T0025069.1 MGP_LPJ_G0017122.1 mouse_genomes_project 10 44508454 44650635 + MGP_LPJ_P0025069 Hace1 protein_coding protein_coding MGP_LPJ_T0025070.1 MGP_LPJ_G0017122.1 mouse_genomes_project 10 44508766 44541557 + MGP_LPJ_P0025070 Hace1 protein_coding protein_coding MGP_LPJ_T0025071.1 MGP_LPJ_G0017122.1 mouse_genomes_project 10 44508905 44541511 + Hace1 protein_coding processed_transcript MGP_LPJ_T0025072.1 MGP_LPJ_G0017122.1 mouse_genomes_project 10 44517492 44587709 + Hace1 protein_coding processed_transcript MGP_LPJ_T0025073.1 MGP_LPJ_G0017122.1 mouse_genomes_project 10 44612031 44650432 + MGP_LPJ_P0025073 Hace1 protein_coding protein_coding MGP_LPJ_T0025074.1 MGP_LPJ_G0017122.1 mouse_genomes_project 10 44613075 44650432 + MGP_LPJ_P0025074 Hace1 protein_coding protein_coding MGP_LPJ_T0025075.1 MGP_LPJ_G0017122.1 mouse_genomes_project 10 44617634 44650544 + Hace1 protein_coding retained_intron MGP_LPJ_T0025720.1 MGP_LPJ_G0017283.1 mouse_genomes_project 10 76638878 76641031 + MGP_LPJ_P0025720 Chchd10 protein_coding protein_coding MGP_LPJ_T0006165.1 MGP_LPJ_G0005149.1 mouse_genomes_project 10 96790752 96810436 - Cep83os lincRNA lincRNA MGP_LPJ_T0024321.1 MGP_LPJ_G0016891.1 mouse_genomes_project 10 935180 1133834 + MGP_LPJ_P0024321 Mthfd1l protein_coding protein_coding MGP_LPJ_T0024322.1 MGP_LPJ_G0016891.1 mouse_genomes_project 10 935193 1146116 + MGP_LPJ_P0024322 Mthfd1l protein_coding protein_coding MGP_LPJ_T0024323.1 MGP_LPJ_G0016891.1 mouse_genomes_project 10 935206 1133834 + MGP_LPJ_P0024323 Mthfd1l protein_coding protein_coding MGP_LPJ_T0024324.1 MGP_LPJ_G0016891.1 mouse_genomes_project 10 996174 1015626 + Mthfd1l protein_coding processed_transcript MGP_LPJ_T0026995.1 MGP_LPJ_G0017636.1 mouse_genomes_project 10 114575991 114578351 + MGP_LPJ_P0026995 Phlda1 protein_coding protein_coding MGP_LPJ_T0026996.1 MGP_LPJ_G0017636.1 mouse_genomes_project 10 114577401 114577871 + Phlda1 protein_coding processed_transcript MGP_LPJ_T0027431.1 MGP_LPJ_G0017779.1 mouse_genomes_project 10 132822649 132827329 - MGP_LPJ_P0027431 Myl6 protein_coding protein_coding MGP_LPJ_T0026107.1 MGP_LPJ_G0017397.1 mouse_genomes_project 10 81212780 81223767 + MGP_LPJ_P0026107 Midn protein_coding protein_coding MGP_LPJ_T0026108.1 MGP_LPJ_G0017397.1 mouse_genomes_project 10 81212780 81223768 + MGP_LPJ_P0026108 Midn protein_coding protein_coding MGP_LPJ_T0026109.1 MGP_LPJ_G0017397.1 mouse_genomes_project 10 81213622 81214789 + MGP_LPJ_P0026109 Midn protein_coding protein_coding MGP_LPJ_T0026110.1 MGP_LPJ_G0017397.1 mouse_genomes_project 10 81214396 81219087 + Midn protein_coding processed_transcript MGP_LPJ_T0026111.1 MGP_LPJ_G0017397.1 mouse_genomes_project 10 81215860 81219268 + MGP_LPJ_P0026111 Midn protein_coding protein_coding MGP_LPJ_T0026112.1 MGP_LPJ_G0017397.1 mouse_genomes_project 10 81216557 81219872 + MGP_LPJ_P0026112 Midn protein_coding protein_coding MGP_LPJ_T0026113.1 MGP_LPJ_G0017397.1 mouse_genomes_project 10 81216641 81219096 + MGP_LPJ_P0026113 Midn protein_coding protein_coding MGP_LPJ_T0025438.1 MGP_LPJ_G0017230.1 mouse_genomes_project 10 63885499 63888100 - MGP_LPJ_P0025438 protein_coding protein_coding MGP_LPJ_T0100098.1 MGP_LPJ_G0038361.1 mouse_genomes_project 10 105767444 105767577 + Gm25376 snoRNA snoRNA MGP_LPJ_T0006139.1 MGP_LPJ_G0005137.1 mouse_genomes_project 10 84213969 84227672 + 1700028I16Rik lincRNA lincRNA MGP_LPJ_T0025562.1 MGP_LPJ_G0017251.1 mouse_genomes_project 10 71270573 71328948 + MGP_LPJ_P0025562 4930533K18Rik protein_coding protein_coding MGP_LPJ_T0101239.1 MGP_LPJ_G0039489.1 mouse_genomes_project 10 7759054 7769424 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101240.1 MGP_LPJ_G0039489.1 mouse_genomes_project 10 7766161 7767158 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0024495.1 MGP_LPJ_G0016929.1 mouse_genomes_project 10 8447669 8465978 + MGP_LPJ_P0024495 Fbxo30 protein_coding protein_coding MGP_LPJ_T0024496.1 MGP_LPJ_G0016929.1 mouse_genomes_project 10 8447926 8463444 + MGP_LPJ_P0024496 Fbxo30 protein_coding protein_coding MGP_LPJ_T0025930.1 MGP_LPJ_G0017349.1 mouse_genomes_project 10 79989053 79994781 + MGP_LPJ_P0025930 Olfr1351 protein_coding protein_coding MGP_LPJ_T0025931.1 MGP_LPJ_G0017349.1 mouse_genomes_project 10 79993821 79994781 + MGP_LPJ_P0025931 Olfr1351 protein_coding protein_coding MGP_LPJ_T0026237.1 MGP_LPJ_G0017426.1 mouse_genomes_project 10 81793578 81810170 - MGP_LPJ_P0026237 Mob3a protein_coding protein_coding MGP_LPJ_T0024809.1 MGP_LPJ_G0017033.1 mouse_genomes_project 10 28830232 28840407 - MGP_LPJ_P0024809 Hint3 protein_coding protein_coding MGP_LPJ_T0024810.1 MGP_LPJ_G0017033.1 mouse_genomes_project 10 28830440 28840261 - MGP_LPJ_P0024810 Hint3 protein_coding nonsense_mediated_decay MGP_LPJ_T0024811.1 MGP_LPJ_G0017033.1 mouse_genomes_project 10 28830474 28840265 - MGP_LPJ_P0024811 Hint3 protein_coding protein_coding MGP_LPJ_T0025044.1 MGP_LPJ_G0017110.1 mouse_genomes_project 10 42309455 42325413 - MGP_LPJ_P0025044 1700021F05Rik protein_coding protein_coding MGP_LPJ_T0025045.1 MGP_LPJ_G0017110.1 mouse_genomes_project 10 42309467 42325387 - MGP_LPJ_P0025045 1700021F05Rik protein_coding protein_coding MGP_LPJ_T0025046.1 MGP_LPJ_G0017110.1 mouse_genomes_project 10 42309493 42310178 - 1700021F05Rik protein_coding processed_transcript MGP_LPJ_T0025047.1 MGP_LPJ_G0017110.1 mouse_genomes_project 10 42317509 42325413 - 1700021F05Rik protein_coding processed_transcript MGP_LPJ_T0027166.1 MGP_LPJ_G0017694.1 mouse_genomes_project 10 125200853 125278595 - MGP_LPJ_P0027166 Rassf3 protein_coding protein_coding MGP_LPJ_T0098828.1 MGP_LPJ_G0037091.1 mouse_genomes_project 10 28699577 28699679 + Gm22623 snRNA snRNA MGP_LPJ_T0000855.1 MGP_LPJ_G0000785.1 mouse_genomes_project 10 79506110 79508863 - TEC TEC MGP_LPJ_T0098873.1 MGP_LPJ_G0037136.1 mouse_genomes_project 10 114161691 114161794 - Gm22101 snRNA snRNA MGP_LPJ_T0000851.1 MGP_LPJ_G0000781.1 mouse_genomes_project 10 38745763 38748986 - TEC TEC MGP_LPJ_T0100076.1 MGP_LPJ_G0038339.1 mouse_genomes_project 10 44189458 44189587 - Gm26016 snoRNA snoRNA MGP_LPJ_T0003087.1 MGP_LPJ_G0002882.1 mouse_genomes_project 10 82754874 82758166 - Gm15917 antisense antisense MGP_LPJ_T0026677.1 MGP_LPJ_G0017543.1 mouse_genomes_project 10 90283236 90376535 - MGP_LPJ_P0026677 Mybpc1 protein_coding protein_coding MGP_LPJ_T0026678.1 MGP_LPJ_G0017543.1 mouse_genomes_project 10 90283239 90288222 - Mybpc1 protein_coding retained_intron MGP_LPJ_T0026679.1 MGP_LPJ_G0017543.1 mouse_genomes_project 10 90283302 90376408 - MGP_LPJ_P0026679 Mybpc1 protein_coding protein_coding MGP_LPJ_T0026680.1 MGP_LPJ_G0017543.1 mouse_genomes_project 10 90284367 90307415 - MGP_LPJ_P0026680 Mybpc1 protein_coding protein_coding MGP_LPJ_T0026681.1 MGP_LPJ_G0017543.1 mouse_genomes_project 10 90291252 90307467 - Mybpc1 protein_coding retained_intron MGP_LPJ_T0026682.1 MGP_LPJ_G0017543.1 mouse_genomes_project 10 90291343 90324557 - MGP_LPJ_P0026682 Mybpc1 protein_coding protein_coding MGP_LPJ_T0024728.1 MGP_LPJ_G0017008.1 mouse_genomes_project 10 22565559 22568798 + MGP_LPJ_P0024728 Ctgf protein_coding protein_coding MGP_LPJ_T0024729.1 MGP_LPJ_G0017008.1 mouse_genomes_project 10 22565843 22568801 + MGP_LPJ_P0024729 Ctgf protein_coding protein_coding MGP_LPJ_T0024730.1 MGP_LPJ_G0017008.1 mouse_genomes_project 10 22565897 22566490 + MGP_LPJ_P0024730 Ctgf protein_coding protein_coding MGP_LPJ_T0017037.1 MGP_LPJ_G0015044.1 mouse_genomes_project 10 4811609 4830340 - Gm20470 processed_transcript processed_transcript MGP_LPJ_T0012415.1 MGP_LPJ_G0010506.1 mouse_genomes_project 10 61043175 61043722 + processed_pseudogene processed_pseudogene MGP_LPJ_T0026758.1 MGP_LPJ_G0017557.1 mouse_genomes_project 10 92994353 93015176 + MGP_LPJ_P0026758 Ikbip protein_coding protein_coding MGP_LPJ_T0026759.1 MGP_LPJ_G0017557.1 mouse_genomes_project 10 92994470 93009972 + MGP_LPJ_P0026759 Ikbip protein_coding protein_coding MGP_LPJ_T0026760.1 MGP_LPJ_G0017557.1 mouse_genomes_project 10 92994519 93004810 + Ikbip protein_coding processed_transcript MGP_LPJ_T0026761.1 MGP_LPJ_G0017557.1 mouse_genomes_project 10 92994533 93005393 + Ikbip protein_coding retained_intron MGP_LPJ_T0026762.1 MGP_LPJ_G0017557.1 mouse_genomes_project 10 93007545 93014664 + Ikbip protein_coding processed_transcript MGP_LPJ_T0026041.1 MGP_LPJ_G0017382.1 mouse_genomes_project 10 80953178 80953463 + MGP_LPJ_P0026041 Gm26602 protein_coding protein_coding MGP_LPJ_T0026516.1 MGP_LPJ_G0017497.1 mouse_genomes_project 10 84655845 84775678 - MGP_LPJ_P0026516 Slc41a2 protein_coding protein_coding MGP_LPJ_T0026517.1 MGP_LPJ_G0017497.1 mouse_genomes_project 10 84735791 84739149 - Slc41a2 protein_coding processed_transcript MGP_LPJ_T0026518.1 MGP_LPJ_G0017497.1 mouse_genomes_project 10 84751504 84759600 - MGP_LPJ_P0026518 Slc41a2 protein_coding protein_coding MGP_LPJ_T0026519.1 MGP_LPJ_G0017497.1 mouse_genomes_project 10 84751631 84775236 - MGP_LPJ_P0026519 Slc41a2 protein_coding protein_coding MGP_LPJ_T0026520.1 MGP_LPJ_G0017497.1 mouse_genomes_project 10 84751861 84773201 - MGP_LPJ_P0026520 Slc41a2 protein_coding protein_coding MGP_LPJ_T0024796.1 MGP_LPJ_G0017027.1 mouse_genomes_project 10 27357255 27378700 + MGP_LPJ_P0024796 9330159F19Rik protein_coding protein_coding MGP_LPJ_T0025263.1 MGP_LPJ_G0017184.1 mouse_genomes_project 10 60385398 60426613 - MGP_LPJ_P0025263 Slc29a3 protein_coding nonsense_mediated_decay MGP_LPJ_T0025264.1 MGP_LPJ_G0017184.1 mouse_genomes_project 10 60386005 60427599 - MGP_LPJ_P0025264 Slc29a3 protein_coding protein_coding MGP_LPJ_T0025265.1 MGP_LPJ_G0017184.1 mouse_genomes_project 10 60386199 60395734 - Slc29a3 protein_coding retained_intron MGP_LPJ_T0025266.1 MGP_LPJ_G0017184.1 mouse_genomes_project 10 60392278 60426624 - Slc29a3 protein_coding processed_transcript MGP_LPJ_T0024430.1 MGP_LPJ_G0016912.1 mouse_genomes_project 10 4729823 4743421 + MGP_LPJ_P0024430 Nup43 protein_coding protein_coding MGP_LPJ_T0024431.1 MGP_LPJ_G0016912.1 mouse_genomes_project 10 4729834 4730612 + Nup43 protein_coding retained_intron MGP_LPJ_T0024432.1 MGP_LPJ_G0016912.1 mouse_genomes_project 10 4729860 4740620 + Nup43 protein_coding retained_intron MGP_LPJ_T0024433.1 MGP_LPJ_G0016912.1 mouse_genomes_project 10 4733605 4739794 + Nup43 protein_coding retained_intron MGP_LPJ_T0027510.1 MGP_LPJ_G0017821.1 mouse_genomes_project 10 133837717 133848046 + MGP_LPJ_P0027510 Olfr786 protein_coding protein_coding MGP_LPJ_T0027511.1 MGP_LPJ_G0017821.1 mouse_genomes_project 10 133847107 133848046 + MGP_LPJ_P0027511 Olfr786 protein_coding protein_coding MGP_LPJ_T0009645.1 MGP_LPJ_G0007763.1 mouse_genomes_project 10 126505070 126505167 + Mir6412 miRNA miRNA MGP_LPJ_T0027558.1 MGP_LPJ_G0017854.1 mouse_genomes_project 10 134575646 134576588 + MGP_LPJ_P0027558 Olfr822 protein_coding protein_coding MGP_LPJ_T0027202.1 MGP_LPJ_G0017706.1 mouse_genomes_project 10 129231657 129349010 - MGP_LPJ_P0027202 Slc16a7 protein_coding protein_coding MGP_LPJ_T0027203.1 MGP_LPJ_G0017706.1 mouse_genomes_project 10 129232685 129326309 - MGP_LPJ_P0027203 Slc16a7 protein_coding protein_coding MGP_LPJ_T0003048.1 MGP_LPJ_G0002850.1 mouse_genomes_project 10 40409227 40416402 + BC048559 antisense antisense MGP_LPJ_T0012383.1 MGP_LPJ_G0010474.1 mouse_genomes_project 10 7485959 7487172 + processed_pseudogene processed_pseudogene MGP_LPJ_T0025764.1 MGP_LPJ_G0017299.1 mouse_genomes_project 10 77333851 77361086 - MGP_LPJ_P0025764 Col6a2 protein_coding protein_coding MGP_LPJ_T0025765.1 MGP_LPJ_G0017299.1 mouse_genomes_project 10 77335920 77360781 - MGP_LPJ_P0025765 Col6a2 protein_coding protein_coding MGP_LPJ_T0025766.1 MGP_LPJ_G0017299.1 mouse_genomes_project 10 77339096 77360781 - Col6a2 protein_coding retained_intron MGP_LPJ_T0011283.1 MGP_LPJ_G0009401.1 mouse_genomes_project 10 23282538 23282791 - Gm26167 misc_RNA misc_RNA MGP_LPJ_T0027197.1 MGP_LPJ_G0017703.1 mouse_genomes_project 10 126873568 126957561 - MGP_LPJ_P0027197 Mon2 protein_coding protein_coding MGP_LPJ_T0027198.1 MGP_LPJ_G0017703.1 mouse_genomes_project 10 126873568 126957561 - MGP_LPJ_P0027198 Mon2 protein_coding protein_coding MGP_LPJ_T0027199.1 MGP_LPJ_G0017703.1 mouse_genomes_project 10 126873568 126957561 - MGP_LPJ_P0027199 Mon2 protein_coding protein_coding MGP_LPJ_T0024919.1 MGP_LPJ_G0017075.1 mouse_genomes_project 10 38544713 38655875 - MGP_LPJ_P0024919 Slc16a10 protein_coding protein_coding MGP_LPJ_T0024718.1 MGP_LPJ_G0016999.1 mouse_genomes_project 10 21923430 21961975 + MGP_LPJ_P0024718 protein_coding protein_coding MGP_LPJ_T0024991.1 MGP_LPJ_G0017097.1 mouse_genomes_project 10 40471631 40571224 + MGP_LPJ_P0024991 Sesn1 protein_coding protein_coding MGP_LPJ_T0024992.1 MGP_LPJ_G0017097.1 mouse_genomes_project 10 40548912 40571224 + MGP_LPJ_P0024992 Sesn1 protein_coding protein_coding MGP_LPJ_T0027562.1 MGP_LPJ_G0017858.1 mouse_genomes_project 10 134784480 134799493 - MGP_LPJ_P0027562 Neurod4 protein_coding protein_coding MGP_LPJ_T0025973.1 MGP_LPJ_G0017368.1 mouse_genomes_project 10 80758634 80771186 - Polrmt protein_coding retained_intron MGP_LPJ_T0025974.1 MGP_LPJ_G0017368.1 mouse_genomes_project 10 80758638 80761918 - MGP_LPJ_P0025974 Polrmt protein_coding protein_coding MGP_LPJ_T0025975.1 MGP_LPJ_G0017368.1 mouse_genomes_project 10 80758639 80771186 - Polrmt protein_coding retained_intron MGP_LPJ_T0025976.1 MGP_LPJ_G0017368.1 mouse_genomes_project 10 80758640 80759327 - Polrmt protein_coding processed_transcript MGP_LPJ_T0025977.1 MGP_LPJ_G0017368.1 mouse_genomes_project 10 80758641 80771194 - MGP_LPJ_P0025977 Polrmt protein_coding protein_coding MGP_LPJ_T0025978.1 MGP_LPJ_G0017368.1 mouse_genomes_project 10 80758641 80771192 - MGP_LPJ_P0025978 Polrmt protein_coding protein_coding MGP_LPJ_T0025979.1 MGP_LPJ_G0017368.1 mouse_genomes_project 10 80758683 80759312 - Polrmt protein_coding retained_intron MGP_LPJ_T0025980.1 MGP_LPJ_G0017368.1 mouse_genomes_project 10 80758684 80760257 - Polrmt protein_coding retained_intron MGP_LPJ_T0025981.1 MGP_LPJ_G0017368.1 mouse_genomes_project 10 80758685 80771184 - MGP_LPJ_P0025981 Polrmt protein_coding nonsense_mediated_decay MGP_LPJ_T0025982.1 MGP_LPJ_G0017368.1 mouse_genomes_project 10 80758718 80760230 - Polrmt protein_coding retained_intron MGP_LPJ_T0025983.1 MGP_LPJ_G0017368.1 mouse_genomes_project 10 80759088 80761175 - Polrmt protein_coding retained_intron MGP_LPJ_T0025984.1 MGP_LPJ_G0017368.1 mouse_genomes_project 10 80760631 80761919 - Polrmt protein_coding retained_intron MGP_LPJ_T0025985.1 MGP_LPJ_G0017368.1 mouse_genomes_project 10 80766210 80771186 - Polrmt protein_coding processed_transcript MGP_LPJ_T0003112.1 MGP_LPJ_G0002900.1 mouse_genomes_project 10 119836444 119838264 + Kcnmb4os2 antisense antisense MGP_LPJ_T0003113.1 MGP_LPJ_G0002900.1 mouse_genomes_project 10 119837309 119838601 + Kcnmb4os2 antisense antisense MGP_LPJ_T0003114.1 MGP_LPJ_G0002900.1 mouse_genomes_project 10 119837626 119838269 + Kcnmb4os2 antisense antisense MGP_LPJ_T0024806.1 MGP_LPJ_G0017030.1 mouse_genomes_project 10 27602795 27687654 - MGP_LPJ_P0024806 Rspo3 protein_coding protein_coding MGP_LPJ_T0003055.1 MGP_LPJ_G0002857.1 mouse_genomes_project 10 62153623 62163277 + Hk1os antisense antisense MGP_LPJ_T0003056.1 MGP_LPJ_G0002857.1 mouse_genomes_project 10 62153974 62163939 + Hk1os antisense antisense MGP_LPJ_T0003057.1 MGP_LPJ_G0002857.1 mouse_genomes_project 10 62153989 62176780 + Hk1os antisense antisense MGP_LPJ_T0026191.1 MGP_LPJ_G0017414.1 mouse_genomes_project 10 81483526 81487296 - Uqcr11 protein_coding processed_transcript MGP_LPJ_T0026192.1 MGP_LPJ_G0017414.1 mouse_genomes_project 10 81483526 81487360 - MGP_LPJ_P0026192 Uqcr11 protein_coding protein_coding MGP_LPJ_T0026193.1 MGP_LPJ_G0017414.1 mouse_genomes_project 10 81483527 81487325 - Uqcr11 protein_coding processed_transcript MGP_LPJ_T0006174.1 MGP_LPJ_G0005156.1 mouse_genomes_project 10 114672978 114680478 - 4933440J02Rik lincRNA lincRNA MGP_LPJ_T0026849.1 MGP_LPJ_G0017578.1 mouse_genomes_project 10 96400642 96526318 + Tmcc3 protein_coding retained_intron MGP_LPJ_T0026850.1 MGP_LPJ_G0017578.1 mouse_genomes_project 10 96400710 96682327 + MGP_LPJ_P0026850 Tmcc3 protein_coding protein_coding MGP_LPJ_T0026851.1 MGP_LPJ_G0017578.1 mouse_genomes_project 10 96400823 96468768 + Tmcc3 protein_coding processed_transcript MGP_LPJ_T0026852.1 MGP_LPJ_G0017578.1 mouse_genomes_project 10 96614794 96694495 + MGP_LPJ_P0026852 Tmcc3 protein_coding protein_coding MGP_LPJ_T0026853.1 MGP_LPJ_G0017578.1 mouse_genomes_project 10 96648938 96682453 + MGP_LPJ_P0026853 Tmcc3 protein_coding protein_coding MGP_LPJ_T0026854.1 MGP_LPJ_G0017578.1 mouse_genomes_project 10 96654359 96682198 + MGP_LPJ_P0026854 Tmcc3 protein_coding protein_coding MGP_LPJ_T0025194.1 MGP_LPJ_G0017170.1 mouse_genomes_project 10 58965146 58984472 - MGP_LPJ_P0025194 Oit3 protein_coding protein_coding MGP_LPJ_T0025195.1 MGP_LPJ_G0017170.1 mouse_genomes_project 10 58970337 58973128 - Oit3 protein_coding retained_intron MGP_LPJ_T0024669.1 MGP_LPJ_G0016976.1 mouse_genomes_project 10 18888725 18890927 + MGP_LPJ_P0024669 Gm9923 protein_coding protein_coding MGP_LPJ_T0025767.1 MGP_LPJ_G0017300.1 mouse_genomes_project 10 77449772 77467146 - MGP_LPJ_P0025767 Col6a1 protein_coding protein_coding MGP_LPJ_T0025768.1 MGP_LPJ_G0017300.1 mouse_genomes_project 10 77455996 77460217 - Col6a1 protein_coding retained_intron MGP_LPJ_T0026320.1 MGP_LPJ_G0017454.1 mouse_genomes_project 10 82350228 82354096 - MGP_LPJ_P0026320 Nmrk2 protein_coding protein_coding MGP_LPJ_T0025648.1 MGP_LPJ_G0017263.1 mouse_genomes_project 10 75840015 75951386 + MGP_LPJ_P0025648 Specc1l protein_coding protein_coding MGP_LPJ_T0025649.1 MGP_LPJ_G0017263.1 mouse_genomes_project 10 75861951 75951386 + MGP_LPJ_P0025649 Specc1l protein_coding protein_coding MGP_LPJ_T0024719.1 MGP_LPJ_G0017000.1 mouse_genomes_project 10 21923545 21924805 + MGP_LPJ_P0024719 protein_coding protein_coding MGP_LPJ_T0027475.1 MGP_LPJ_G0017801.1 mouse_genomes_project 10 133291682 133297967 - MGP_LPJ_P0027475 protein_coding unknown_likely_coding MGP_LPJ_T0027476.1 MGP_LPJ_G0017801.1 mouse_genomes_project 10 133291910 133296750 - MGP_LPJ_P0027476 protein_coding protein_coding MGP_LPJ_T0027477.1 MGP_LPJ_G0017801.1 mouse_genomes_project 10 133291939 133292842 - protein_coding retained_intron MGP_LPJ_T0027478.1 MGP_LPJ_G0017801.1 mouse_genomes_project 10 133292318 133297971 - MGP_LPJ_P0027478 protein_coding protein_coding MGP_LPJ_T0027479.1 MGP_LPJ_G0017801.1 mouse_genomes_project 10 133295994 133297996 - protein_coding retained_intron MGP_LPJ_T0027481.1 MGP_LPJ_G0017801.1 mouse_genomes_project 10 133296621 133297403 - MGP_LPJ_P0027481 protein_coding protein_coding MGP_LPJ_T0027482.1 MGP_LPJ_G0017801.1 mouse_genomes_project 10 133297117 133301587 - MGP_LPJ_P0027482 protein_coding protein_coding MGP_LPJ_T0025478.1 MGP_LPJ_G0017242.1 mouse_genomes_project 10 68971382 69029188 + MGP_LPJ_P0025478 Tmem26 protein_coding protein_coding MGP_LPJ_T0100113.1 MGP_LPJ_G0038376.1 mouse_genomes_project 10 132670145 132670280 + Gm23182 snoRNA snoRNA MGP_LPJ_T0025085.1 MGP_LPJ_G0017125.1 mouse_genomes_project 10 50031875 50130553 + MGP_LPJ_P0025085 Sim1 protein_coding protein_coding MGP_LPJ_T0017078.1 MGP_LPJ_G0015058.1 mouse_genomes_project 10 131450249 131451341 - Gm4189 processed_transcript processed_transcript MGP_LPJ_T0017079.1 MGP_LPJ_G0015058.1 mouse_genomes_project 10 131450249 131451278 - Gm4189 processed_transcript retained_intron MGP_LPJ_T0024474.1 MGP_LPJ_G0016924.1 mouse_genomes_project 10 7478266 7618206 - MGP_LPJ_P0024474 protein_coding protein_coding MGP_LPJ_T0024475.1 MGP_LPJ_G0016924.1 mouse_genomes_project 10 7478272 7563360 - MGP_LPJ_P0024475 protein_coding nonsense_mediated_decay MGP_LPJ_T0024476.1 MGP_LPJ_G0016924.1 mouse_genomes_project 10 7478272 7618218 - MGP_LPJ_P0024476 protein_coding protein_coding MGP_LPJ_T0024477.1 MGP_LPJ_G0016924.1 mouse_genomes_project 10 7478501 7618206 - MGP_LPJ_P0024477 protein_coding unknown_likely_coding MGP_LPJ_T0024478.1 MGP_LPJ_G0016924.1 mouse_genomes_project 10 7550734 7579527 - MGP_LPJ_P0024478 protein_coding protein_coding MGP_LPJ_T0024479.1 MGP_LPJ_G0016924.1 mouse_genomes_project 10 7551392 7618218 - MGP_LPJ_P0024479 protein_coding protein_coding MGP_LPJ_T0027040.1 MGP_LPJ_G0017655.1 mouse_genomes_project 10 119348102 119622991 + MGP_LPJ_P0027040 Ptprr protein_coding protein_coding MGP_LPJ_T0027041.1 MGP_LPJ_G0017655.1 mouse_genomes_project 10 119348176 119451097 + Ptprr protein_coding processed_transcript MGP_LPJ_T0027043.1 MGP_LPJ_G0017655.1 mouse_genomes_project 10 119480057 119622989 + MGP_LPJ_P0027043 Ptprr protein_coding protein_coding MGP_LPJ_T0027044.1 MGP_LPJ_G0017655.1 mouse_genomes_project 10 119509638 119622991 + MGP_LPJ_P0027044 Ptprr protein_coding protein_coding MGP_LPJ_T0027045.1 MGP_LPJ_G0017655.1 mouse_genomes_project 10 119509731 119622991 + MGP_LPJ_P0027045 Ptprr protein_coding protein_coding MGP_LPJ_T0027046.1 MGP_LPJ_G0017655.1 mouse_genomes_project 10 119509791 119622404 + MGP_LPJ_P0027046 Ptprr protein_coding protein_coding MGP_LPJ_T0027047.1 MGP_LPJ_G0017655.1 mouse_genomes_project 10 119535215 119580507 + Ptprr protein_coding processed_transcript MGP_LPJ_T0024764.1 MGP_LPJ_G0017018.1 mouse_genomes_project 10 24277093 24324086 + MGP_LPJ_P0024764 Samd3 protein_coding protein_coding MGP_LPJ_T0024765.1 MGP_LPJ_G0017018.1 mouse_genomes_project 10 24277093 24309765 + MGP_LPJ_P0024765 Samd3 protein_coding protein_coding MGP_LPJ_T0009620.1 MGP_LPJ_G0007738.1 mouse_genomes_project 10 82239023 82239083 + Mir5615-2 miRNA miRNA MGP_LPJ_T0026837.1 MGP_LPJ_G0017574.1 mouse_genomes_project 10 96097783 96217823 + MGP_LPJ_P0026837 Fgd6 protein_coding protein_coding MGP_LPJ_T0026838.1 MGP_LPJ_G0017574.1 mouse_genomes_project 10 96138308 96158167 + Fgd6 protein_coding processed_transcript MGP_LPJ_T0026839.1 MGP_LPJ_G0017574.1 mouse_genomes_project 10 96203178 96210109 + Fgd6 protein_coding retained_intron MGP_LPJ_T0025544.1 MGP_LPJ_G0017247.1 mouse_genomes_project 10 70454876 70564602 + MGP_LPJ_P0025544 Ccdc6 protein_coding protein_coding MGP_LPJ_T0025545.1 MGP_LPJ_G0017247.1 mouse_genomes_project 10 70544955 70553603 + Ccdc6 protein_coding retained_intron MGP_LPJ_T0025546.1 MGP_LPJ_G0017247.1 mouse_genomes_project 10 70545457 70559570 + MGP_LPJ_P0025546 Ccdc6 protein_coding protein_coding MGP_LPJ_T0025547.1 MGP_LPJ_G0017247.1 mouse_genomes_project 10 70545493 70559584 + MGP_LPJ_P0025547 Ccdc6 protein_coding protein_coding MGP_LPJ_T0098826.1 MGP_LPJ_G0037089.1 mouse_genomes_project 10 22875862 22875969 + Gm23410 snRNA snRNA MGP_LPJ_T0027188.1 MGP_LPJ_G0017701.1 mouse_genomes_project 10 126284984 126289943 + MGP_LPJ_P0027188 Avpr1a protein_coding protein_coding MGP_LPJ_T0026855.1 MGP_LPJ_G0017579.1 mouse_genomes_project 10 96810612 96912995 + MGP_LPJ_P0026855 Cep83 protein_coding protein_coding MGP_LPJ_T0098838.1 MGP_LPJ_G0037101.1 mouse_genomes_project 10 45823697 45823859 - Gm25650 snRNA snRNA MGP_LPJ_T0026043.1 MGP_LPJ_G0017384.1 mouse_genomes_project 10 80969366 80999794 + MGP_LPJ_P0026043 Arid3a protein_coding protein_coding MGP_LPJ_T0026044.1 MGP_LPJ_G0017384.1 mouse_genomes_project 10 80969462 80999487 + MGP_LPJ_P0026044 Arid3a protein_coding protein_coding MGP_LPJ_T0026045.1 MGP_LPJ_G0017384.1 mouse_genomes_project 10 80969664 80999479 + MGP_LPJ_P0026045 Arid3a protein_coding protein_coding MGP_LPJ_T0026046.1 MGP_LPJ_G0017384.1 mouse_genomes_project 10 80972618 80973413 + MGP_LPJ_P0026046 Arid3a protein_coding protein_coding MGP_LPJ_T0026047.1 MGP_LPJ_G0017384.1 mouse_genomes_project 10 80991071 80997419 + Arid3a protein_coding processed_transcript MGP_LPJ_T0098830.1 MGP_LPJ_G0037093.1 mouse_genomes_project 10 29384221 29384328 - Gm23790 snRNA snRNA MGP_LPJ_T0025968.1 MGP_LPJ_G0017366.1 mouse_genomes_project 10 80726066 80733462 + MGP_LPJ_P0025968 Bsg protein_coding protein_coding MGP_LPJ_T0025969.1 MGP_LPJ_G0017366.1 mouse_genomes_project 10 80726074 80732295 + Bsg protein_coding processed_transcript MGP_LPJ_T0025970.1 MGP_LPJ_G0017366.1 mouse_genomes_project 10 80726084 80733544 + MGP_LPJ_P0025970 Bsg protein_coding protein_coding MGP_LPJ_T0025971.1 MGP_LPJ_G0017366.1 mouse_genomes_project 10 80731671 80733277 + Bsg protein_coding retained_intron MGP_LPJ_T0025422.1 MGP_LPJ_G0017226.1 mouse_genomes_project 10 63160192 63241076 + MGP_LPJ_P0025422 Herc4 protein_coding protein_coding MGP_LPJ_T0025423.1 MGP_LPJ_G0017226.1 mouse_genomes_project 10 63160456 63241065 + MGP_LPJ_P0025423 Herc4 protein_coding unknown_likely_coding MGP_LPJ_T0024756.1 MGP_LPJ_G0017014.1 mouse_genomes_project 10 23375691 23539337 + MGP_LPJ_P0024756 Epb41l2 protein_coding protein_coding MGP_LPJ_T0024757.1 MGP_LPJ_G0017014.1 mouse_genomes_project 10 23375847 23504625 + MGP_LPJ_P0024757 Epb41l2 protein_coding unknown_likely_coding MGP_LPJ_T0024758.1 MGP_LPJ_G0017014.1 mouse_genomes_project 10 23424508 23539337 + MGP_LPJ_P0024758 Epb41l2 protein_coding protein_coding MGP_LPJ_T0024759.1 MGP_LPJ_G0017014.1 mouse_genomes_project 10 23506549 23539340 + MGP_LPJ_P0024759 Epb41l2 protein_coding unknown_likely_coding MGP_LPJ_T0003059.1 MGP_LPJ_G0002859.1 mouse_genomes_project 10 62857653 62858540 + Gm16135 antisense antisense MGP_LPJ_T0098825.1 MGP_LPJ_G0037088.1 mouse_genomes_project 10 21046672 21046779 - Gm24655 snRNA snRNA MGP_LPJ_T0025493.1 MGP_LPJ_G0017245.1 mouse_genomes_project 10 69620932 69637235 - MGP_LPJ_P0025493 Cdk1 protein_coding protein_coding MGP_LPJ_T0025494.1 MGP_LPJ_G0017245.1 mouse_genomes_project 10 69622621 69637200 - MGP_LPJ_P0025494 Cdk1 protein_coding protein_coding MGP_LPJ_T0025495.1 MGP_LPJ_G0017245.1 mouse_genomes_project 10 69624896 69627027 - Cdk1 protein_coding retained_intron MGP_LPJ_T0025496.1 MGP_LPJ_G0017245.1 mouse_genomes_project 10 69625027 69629808 - Cdk1 protein_coding retained_intron MGP_LPJ_T0025497.1 MGP_LPJ_G0017245.1 mouse_genomes_project 10 69625063 69635128 - MGP_LPJ_P0025497 Cdk1 protein_coding protein_coding MGP_LPJ_T0025498.1 MGP_LPJ_G0017245.1 mouse_genomes_project 10 69625101 69629732 - Cdk1 protein_coding retained_intron MGP_LPJ_T0025499.1 MGP_LPJ_G0017245.1 mouse_genomes_project 10 69629302 69637207 - Cdk1 protein_coding retained_intron MGP_LPJ_T0012410.1 MGP_LPJ_G0010501.1 mouse_genomes_project 10 57064513 57065069 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003095.1 MGP_LPJ_G0002888.1 mouse_genomes_project 10 88515606 88553860 + Gm16268 antisense antisense MGP_LPJ_T0024530.1 MGP_LPJ_G0016936.1 mouse_genomes_project 10 10432692 10447979 - MGP_LPJ_P0024530 Ltv1 protein_coding protein_coding MGP_LPJ_T0097965.1 MGP_LPJ_G0036246.1 mouse_genomes_project 10 42837757 42838305 + pseudogene pseudogene MGP_LPJ_T0027182.1 MGP_LPJ_G0017700.1 mouse_genomes_project 10 125943232 125960749 - MGP_LPJ_P0027182 Tmem5 protein_coding protein_coding MGP_LPJ_T0027183.1 MGP_LPJ_G0017700.1 mouse_genomes_project 10 125946300 125960534 - MGP_LPJ_P0027183 Tmem5 protein_coding nonsense_mediated_decay MGP_LPJ_T0027184.1 MGP_LPJ_G0017700.1 mouse_genomes_project 10 125946722 125952729 - Tmem5 protein_coding retained_intron MGP_LPJ_T0027185.1 MGP_LPJ_G0017700.1 mouse_genomes_project 10 125951984 125954045 - Tmem5 protein_coding retained_intron MGP_LPJ_T0027186.1 MGP_LPJ_G0017700.1 mouse_genomes_project 10 125952361 125959476 - Tmem5 protein_coding retained_intron MGP_LPJ_T0027187.1 MGP_LPJ_G0017700.1 mouse_genomes_project 10 125959395 125960504 - Tmem5 protein_coding processed_transcript MGP_LPJ_T0003072.1 MGP_LPJ_G0002870.1 mouse_genomes_project 10 77279462 77295841 - 4930483K19Rik antisense antisense MGP_LPJ_T0027113.1 MGP_LPJ_G0017681.1 mouse_genomes_project 10 122817486 122866535 - MGP_LPJ_P0027113 Cand1 protein_coding protein_coding MGP_LPJ_T0027114.1 MGP_LPJ_G0017681.1 mouse_genomes_project 10 122824545 122826429 - Cand1 protein_coding retained_intron MGP_LPJ_T0027115.1 MGP_LPJ_G0017681.1 mouse_genomes_project 10 122829999 122830830 - Cand1 protein_coding retained_intron MGP_LPJ_T0027116.1 MGP_LPJ_G0017681.1 mouse_genomes_project 10 122840605 122865783 - MGP_LPJ_P0027116 Cand1 protein_coding protein_coding MGP_LPJ_T0026870.1 MGP_LPJ_G0017584.1 mouse_genomes_project 10 97668214 97690167 - MGP_LPJ_P0026870 Mrpl42 protein_coding unknown_likely_coding MGP_LPJ_T0027515.1 MGP_LPJ_G0017825.1 mouse_genomes_project 10 133903242 133904211 + MGP_LPJ_P0027515 Olfr790 protein_coding protein_coding MGP_LPJ_T0026372.1 MGP_LPJ_G0017466.1 mouse_genomes_project 10 82518924 82527656 + MGP_LPJ_P0026372 Mfsd12 protein_coding protein_coding MGP_LPJ_T0026373.1 MGP_LPJ_G0017466.1 mouse_genomes_project 10 82518985 82522663 + MGP_LPJ_P0026373 Mfsd12 protein_coding nonsense_mediated_decay MGP_LPJ_T0026641.1 MGP_LPJ_G0017535.1 mouse_genomes_project 10 89837252 89838556 + MGP_LPJ_P0026641 Pmch protein_coding protein_coding MGP_LPJ_T0024848.1 MGP_LPJ_G0017055.1 mouse_genomes_project 10 32624001 32650115 - Nt5dc1 protein_coding processed_transcript MGP_LPJ_T0024850.1 MGP_LPJ_G0017055.1 mouse_genomes_project 10 32640000 32764202 - MGP_LPJ_P0024850 Nt5dc1 protein_coding protein_coding MGP_LPJ_T0024851.1 MGP_LPJ_G0017055.1 mouse_genomes_project 10 32640000 32764189 - MGP_LPJ_P0024851 Nt5dc1 protein_coding protein_coding MGP_LPJ_T0024852.1 MGP_LPJ_G0017055.1 mouse_genomes_project 10 32640656 32764178 - Nt5dc1 protein_coding processed_transcript MGP_LPJ_T0024854.1 MGP_LPJ_G0017055.1 mouse_genomes_project 10 32741564 32764131 - MGP_LPJ_P0024854 Nt5dc1 protein_coding protein_coding MGP_LPJ_T0025385.1 MGP_LPJ_G0017217.1 mouse_genomes_project 10 62586213 62637966 - MGP_LPJ_P0025385 Ccar1 protein_coding protein_coding MGP_LPJ_T0024843.1 MGP_LPJ_G0017050.1 mouse_genomes_project 10 32364422 32369952 - MGP_LPJ_P0024843 Fam26d protein_coding protein_coding MGP_LPJ_T0024837.1 MGP_LPJ_G0017045.1 mouse_genomes_project 10 32219713 32229122 + MGP_LPJ_P0024837 Rsph4a protein_coding protein_coding MGP_LPJ_T0024736.1 MGP_LPJ_G0017010.1 mouse_genomes_project 10 22756323 22823603 - MGP_LPJ_P0024736 Enpp3 protein_coding protein_coding MGP_LPJ_T0009586.1 MGP_LPJ_G0007704.1 mouse_genomes_project 10 17837811 17837919 - Mir6413 miRNA miRNA MGP_LPJ_T0024849.1 MGP_LPJ_G0017056.1 mouse_genomes_project 10 32633833 32637712 + MGP_LPJ_P0024849 Tspyl4 protein_coding protein_coding MGP_LPJ_T0024896.1 MGP_LPJ_G0017068.1 mouse_genomes_project 10 38098198 38143417 + MGP_LPJ_P0024896 Traf3ip2 protein_coding protein_coding MGP_LPJ_T0024897.1 MGP_LPJ_G0017068.1 mouse_genomes_project 10 38128238 38132948 + Traf3ip2 protein_coding retained_intron MGP_LPJ_T0024898.1 MGP_LPJ_G0017068.1 mouse_genomes_project 10 38133312 38138110 + Traf3ip2 protein_coding processed_transcript MGP_LPJ_T0024899.1 MGP_LPJ_G0017068.1 mouse_genomes_project 10 38133903 38142933 + Traf3ip2 protein_coding retained_intron MGP_LPJ_T0024900.1 MGP_LPJ_G0017068.1 mouse_genomes_project 10 38137744 38142935 + Traf3ip2 protein_coding retained_intron MGP_LPJ_T0000846.1 MGP_LPJ_G0000776.1 mouse_genomes_project 10 11614962 11615788 + TEC TEC MGP_LPJ_T0025053.1 MGP_LPJ_G0017114.1 mouse_genomes_project 10 42730663 42777442 + MGP_LPJ_P0025053 Rtn4ip1 protein_coding protein_coding MGP_LPJ_T0025054.1 MGP_LPJ_G0017114.1 mouse_genomes_project 10 42731245 42777451 + MGP_LPJ_P0025054 Rtn4ip1 protein_coding protein_coding MGP_LPJ_T0025736.1 MGP_LPJ_G0017291.1 mouse_genomes_project 10 77000689 77006774 - MGP_LPJ_P0025736 Dip2a protein_coding nonsense_mediated_decay MGP_LPJ_T0025737.1 MGP_LPJ_G0017291.1 mouse_genomes_project 10 77004001 77083477 - MGP_LPJ_P0025737 Dip2a protein_coding protein_coding MGP_LPJ_T0025738.1 MGP_LPJ_G0017291.1 mouse_genomes_project 10 77004299 77027109 - Dip2a protein_coding retained_intron MGP_LPJ_T0025739.1 MGP_LPJ_G0017291.1 mouse_genomes_project 10 77004309 77083383 - MGP_LPJ_P0025739 Dip2a protein_coding unknown_likely_coding MGP_LPJ_T0025740.1 MGP_LPJ_G0017291.1 mouse_genomes_project 10 77004316 77083446 - MGP_LPJ_P0025740 Dip2a protein_coding protein_coding MGP_LPJ_T0025741.1 MGP_LPJ_G0017291.1 mouse_genomes_project 10 77004316 77083477 - MGP_LPJ_P0025741 Dip2a protein_coding protein_coding MGP_LPJ_T0025742.1 MGP_LPJ_G0017291.1 mouse_genomes_project 10 77005937 77011837 - Dip2a protein_coding retained_intron MGP_LPJ_T0025743.1 MGP_LPJ_G0017291.1 mouse_genomes_project 10 77023858 77033717 - MGP_LPJ_P0025743 Dip2a protein_coding nonsense_mediated_decay MGP_LPJ_T0025744.1 MGP_LPJ_G0017291.1 mouse_genomes_project 10 77036534 77083418 - Dip2a protein_coding retained_intron MGP_LPJ_T0026252.1 MGP_LPJ_G0017432.1 mouse_genomes_project 10 81922948 81925349 + MGP_LPJ_P0026252 Amh protein_coding protein_coding MGP_LPJ_T0000861.1 MGP_LPJ_G0000790.1 mouse_genomes_project 10 103286892 103287656 - TEC TEC MGP_LPJ_T0024655.1 MGP_LPJ_G0016972.1 mouse_genomes_project 10 17949638 18295984 - MGP_LPJ_P0024655 Pde7b protein_coding protein_coding MGP_LPJ_T0024656.1 MGP_LPJ_G0016972.1 mouse_genomes_project 10 17950562 18111068 - MGP_LPJ_P0024656 Pde7b protein_coding nonsense_mediated_decay MGP_LPJ_T0024657.1 MGP_LPJ_G0016972.1 mouse_genomes_project 10 17952052 18295602 - MGP_LPJ_P0024657 Pde7b protein_coding protein_coding MGP_LPJ_T0024658.1 MGP_LPJ_G0016972.1 mouse_genomes_project 10 17952052 18111068 - MGP_LPJ_P0024658 Pde7b protein_coding protein_coding MGP_LPJ_T0024659.1 MGP_LPJ_G0016972.1 mouse_genomes_project 10 17960072 18111210 - MGP_LPJ_P0024659 Pde7b protein_coding protein_coding MGP_LPJ_T0024660.1 MGP_LPJ_G0016972.1 mouse_genomes_project 10 18034762 18295938 - Pde7b protein_coding retained_intron MGP_LPJ_T0024661.1 MGP_LPJ_G0016972.1 mouse_genomes_project 10 18185921 18295938 - Pde7b protein_coding retained_intron MGP_LPJ_T0024826.1 MGP_LPJ_G0017040.1 mouse_genomes_project 10 29924073 31164204 - MGP_LPJ_P0024826 Nkain2 protein_coding protein_coding MGP_LPJ_T0024827.1 MGP_LPJ_G0017040.1 mouse_genomes_project 10 30592718 30677577 - MGP_LPJ_P0024827 Nkain2 protein_coding protein_coding MGP_LPJ_T0024828.1 MGP_LPJ_G0017040.1 mouse_genomes_project 10 31163647 31164205 - MGP_LPJ_P0024828 Nkain2 protein_coding protein_coding MGP_LPJ_T0006109.1 MGP_LPJ_G0005113.1 mouse_genomes_project 10 35749767 35791913 + Gm26535 lincRNA lincRNA MGP_LPJ_T0006187.1 MGP_LPJ_G0005165.1 mouse_genomes_project 10 132835128 132840005 + A430046D13Rik lincRNA lincRNA MGP_LPJ_T0027473.1 MGP_LPJ_G0017800.1 mouse_genomes_project 10 133286993 133290910 + MGP_LPJ_P0027473 Cd63 protein_coding protein_coding MGP_LPJ_T0027474.1 MGP_LPJ_G0017800.1 mouse_genomes_project 10 133287940 133290910 + MGP_LPJ_P0027474 Cd63 protein_coding protein_coding MGP_LPJ_T0027277.1 MGP_LPJ_G0017732.1 mouse_genomes_project 10 131520532 131522897 - MGP_LPJ_P0027277 Inhbe protein_coding protein_coding MGP_LPJ_T0100056.1 MGP_LPJ_G0038319.1 mouse_genomes_project 10 8828241 8828371 + Gm22546 snoRNA snoRNA MGP_LPJ_T0025723.1 MGP_LPJ_G0017285.1 mouse_genomes_project 10 76657672 76720428 + MGP_LPJ_P0025723 Gm5134 protein_coding protein_coding MGP_LPJ_T0025724.1 MGP_LPJ_G0017285.1 mouse_genomes_project 10 76681578 76709191 + Gm5134 protein_coding retained_intron MGP_LPJ_T0003100.1 MGP_LPJ_G0002892.1 mouse_genomes_project 10 90197441 90205383 - Gm16235 antisense antisense MGP_LPJ_T0003101.1 MGP_LPJ_G0002892.1 mouse_genomes_project 10 90198355 90199140 - Gm16235 antisense antisense MGP_LPJ_T0100081.1 MGP_LPJ_G0038344.1 mouse_genomes_project 10 58730332 58730459 + Gm23223 snoRNA snoRNA MGP_LPJ_T0026253.1 MGP_LPJ_G0017433.1 mouse_genomes_project 10 81926296 81929686 - MGP_LPJ_P0026253 Jsrp1 protein_coding protein_coding MGP_LPJ_T0026254.1 MGP_LPJ_G0017433.1 mouse_genomes_project 10 81926298 81931293 - MGP_LPJ_P0026254 Jsrp1 protein_coding protein_coding MGP_LPJ_T0026255.1 MGP_LPJ_G0017433.1 mouse_genomes_project 10 81926301 81931296 - MGP_LPJ_P0026255 Jsrp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0026256.1 MGP_LPJ_G0017433.1 mouse_genomes_project 10 81927983 81931299 - MGP_LPJ_P0026256 Jsrp1 protein_coding protein_coding MGP_LPJ_T0025086.1 MGP_LPJ_G0017126.1 mouse_genomes_project 10 50642706 50678528 + MGP_LPJ_P0025086 protein_coding protein_coding MGP_LPJ_T0025087.1 MGP_LPJ_G0017126.1 mouse_genomes_project 10 50642706 50678528 + MGP_LPJ_P0025087 protein_coding protein_coding MGP_LPJ_T0025090.1 MGP_LPJ_G0017126.1 mouse_genomes_project 10 50651913 50678528 + MGP_LPJ_P0025090 protein_coding protein_coding MGP_LPJ_T0025701.1 MGP_LPJ_G0017276.1 mouse_genomes_project 10 76475385 76491710 - MGP_LPJ_P0025701 Gstt1 protein_coding protein_coding MGP_LPJ_T0025702.1 MGP_LPJ_G0017276.1 mouse_genomes_project 10 76475556 76490673 - MGP_LPJ_P0025702 Gstt1 protein_coding protein_coding MGP_LPJ_T0025703.1 MGP_LPJ_G0017276.1 mouse_genomes_project 10 76478367 76490857 - MGP_LPJ_P0025703 Gstt1 protein_coding protein_coding MGP_LPJ_T0012402.1 MGP_LPJ_G0010493.1 mouse_genomes_project 10 41032057 41032535 - processed_pseudogene processed_pseudogene MGP_LPJ_T0027544.1 MGP_LPJ_G0017844.1 mouse_genomes_project 10 134283882 134287860 - MGP_LPJ_P0027544 Olfr812 protein_coding protein_coding MGP_LPJ_T0027545.1 MGP_LPJ_G0017844.1 mouse_genomes_project 10 134283882 134284925 - MGP_LPJ_P0027545 Olfr812 protein_coding protein_coding MGP_LPJ_T0012379.1 MGP_LPJ_G0010470.1 mouse_genomes_project 10 904747 905646 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000848.1 MGP_LPJ_G0000778.1 mouse_genomes_project 10 19704621 19706692 - TEC TEC MGP_LPJ_T0009600.1 MGP_LPJ_G0007718.1 mouse_genomes_project 10 60610726 60610817 + Mir6408 miRNA miRNA MGP_LPJ_T0003032.1 MGP_LPJ_G0002839.1 mouse_genomes_project 10 11992976 11998360 + Gm16234 antisense antisense MGP_LPJ_T0025382.1 MGP_LPJ_G0017216.1 mouse_genomes_project 10 62500727 62571657 - MGP_LPJ_P0025382 Stox1 protein_coding protein_coding MGP_LPJ_T0025383.1 MGP_LPJ_G0017216.1 mouse_genomes_project 10 62500727 62571330 - MGP_LPJ_P0025383 Stox1 protein_coding protein_coding MGP_LPJ_T0025384.1 MGP_LPJ_G0017216.1 mouse_genomes_project 10 62507859 62571330 - MGP_LPJ_P0025384 Stox1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024600.1 MGP_LPJ_G0016954.1 mouse_genomes_project 10 15883623 16020398 + MGP_LPJ_P0024600 Nhsl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024601.1 MGP_LPJ_G0016954.1 mouse_genomes_project 10 15901071 15915722 + Nhsl1 protein_coding processed_transcript MGP_LPJ_T0024602.1 MGP_LPJ_G0016954.1 mouse_genomes_project 10 15901108 16008546 + Nhsl1 protein_coding retained_intron MGP_LPJ_T0024603.1 MGP_LPJ_G0016954.1 mouse_genomes_project 10 15901108 16029998 + MGP_LPJ_P0024603 Nhsl1 protein_coding protein_coding MGP_LPJ_T0024604.1 MGP_LPJ_G0016954.1 mouse_genomes_project 10 15964403 15967935 + Nhsl1 protein_coding retained_intron MGP_LPJ_T0024605.1 MGP_LPJ_G0016954.1 mouse_genomes_project 10 15964483 15994101 + Nhsl1 protein_coding processed_transcript MGP_LPJ_T0024606.1 MGP_LPJ_G0016954.1 mouse_genomes_project 10 15964496 16022068 + MGP_LPJ_P0024606 Nhsl1 protein_coding protein_coding MGP_LPJ_T0024607.1 MGP_LPJ_G0016954.1 mouse_genomes_project 10 15964496 16029995 + MGP_LPJ_P0024607 Nhsl1 protein_coding protein_coding MGP_LPJ_T0025305.1 MGP_LPJ_G0017199.1 mouse_genomes_project 10 61455736 61464168 + MGP_LPJ_P0025305 Tysnd1 protein_coding protein_coding MGP_LPJ_T0025844.1 MGP_LPJ_G0017321.1 mouse_genomes_project 10 78629414 78630098 - MGP_LPJ_P0025844 Gm19668 protein_coding protein_coding MGP_LPJ_T0025139.1 MGP_LPJ_G0017151.1 mouse_genomes_project 10 56974563 56991321 - MGP_LPJ_P0025139 Serinc1 protein_coding protein_coding MGP_LPJ_T0025140.1 MGP_LPJ_G0017151.1 mouse_genomes_project 10 56981825 56991219 - MGP_LPJ_P0025140 Serinc1 protein_coding protein_coding MGP_LPJ_T0025141.1 MGP_LPJ_G0017151.1 mouse_genomes_project 10 56981974 56991201 - MGP_LPJ_P0025141 Serinc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0025142.1 MGP_LPJ_G0017151.1 mouse_genomes_project 10 56984015 56991268 - Serinc1 protein_coding retained_intron MGP_LPJ_T0025143.1 MGP_LPJ_G0017151.1 mouse_genomes_project 10 56984021 56991200 - Serinc1 protein_coding retained_intron MGP_LPJ_T0006190.1 MGP_LPJ_G0005168.1 mouse_genomes_project 10 133415584 133429743 - lincRNA lincRNA MGP_LPJ_T0027375.1 MGP_LPJ_G0017762.1 mouse_genomes_project 10 132498421 132515196 + MGP_LPJ_P0027375 Gls2 protein_coding protein_coding MGP_LPJ_T0027376.1 MGP_LPJ_G0017762.1 mouse_genomes_project 10 132498556 132504575 + MGP_LPJ_P0027376 Gls2 protein_coding protein_coding MGP_LPJ_T0027377.1 MGP_LPJ_G0017762.1 mouse_genomes_project 10 132498638 132515191 + MGP_LPJ_P0027377 Gls2 protein_coding nonsense_mediated_decay MGP_LPJ_T0027378.1 MGP_LPJ_G0017762.1 mouse_genomes_project 10 132498641 132504955 + Gls2 protein_coding processed_transcript MGP_LPJ_T0027379.1 MGP_LPJ_G0017762.1 mouse_genomes_project 10 132498645 132515261 + MGP_LPJ_P0027379 Gls2 protein_coding nonsense_mediated_decay MGP_LPJ_T0027380.1 MGP_LPJ_G0017762.1 mouse_genomes_project 10 132498667 132515191 + MGP_LPJ_P0027380 Gls2 protein_coding nonsense_mediated_decay MGP_LPJ_T0027381.1 MGP_LPJ_G0017762.1 mouse_genomes_project 10 132498725 132505113 + Gls2 protein_coding retained_intron MGP_LPJ_T0027382.1 MGP_LPJ_G0017762.1 mouse_genomes_project 10 132508523 132509450 + Gls2 protein_coding retained_intron MGP_LPJ_T0027383.1 MGP_LPJ_G0017762.1 mouse_genomes_project 10 132508941 132512262 + Gls2 protein_coding processed_transcript MGP_LPJ_T0027384.1 MGP_LPJ_G0017762.1 mouse_genomes_project 10 132509022 132515199 + Gls2 protein_coding retained_intron MGP_LPJ_T0027385.1 MGP_LPJ_G0017762.1 mouse_genomes_project 10 132512183 132514987 + MGP_LPJ_P0027385 Gls2 protein_coding protein_coding MGP_LPJ_T0027331.1 MGP_LPJ_G0017743.1 mouse_genomes_project 10 131907300 131922932 + MGP_LPJ_P0027331 Myo1a protein_coding protein_coding MGP_LPJ_T0027332.1 MGP_LPJ_G0017743.1 mouse_genomes_project 10 131907386 131935092 + MGP_LPJ_P0027332 Myo1a protein_coding unknown_likely_coding MGP_LPJ_T0024885.1 MGP_LPJ_G0017065.1 mouse_genomes_project 10 37594816 37612759 + MGP_LPJ_P0024885 Tube1 protein_coding protein_coding MGP_LPJ_T0025109.1 MGP_LPJ_G0017136.1 mouse_genomes_project 10 51580232 51580319 + MGP_LPJ_P0025109 Gm26741 protein_coding protein_coding MGP_LPJ_T0006189.1 MGP_LPJ_G0005167.1 mouse_genomes_project 10 133351128 133357192 + 9030616G12Rik lincRNA lincRNA MGP_LPJ_T0027167.1 MGP_LPJ_G0017695.1 mouse_genomes_project 10 125358052 125398003 - MGP_LPJ_P0027167 Tbk1 protein_coding protein_coding MGP_LPJ_T0026918.1 MGP_LPJ_G0017610.1 mouse_genomes_project 10 104226447 104588484 + Mgat4c protein_coding retained_intron MGP_LPJ_T0026919.1 MGP_LPJ_G0017610.1 mouse_genomes_project 10 104226447 104987996 + MGP_LPJ_P0026919 Mgat4c protein_coding protein_coding MGP_LPJ_T0026920.1 MGP_LPJ_G0017610.1 mouse_genomes_project 10 104226601 104970666 + Mgat4c protein_coding processed_transcript MGP_LPJ_T0026921.1 MGP_LPJ_G0017610.1 mouse_genomes_project 10 104226601 104971286 + MGP_LPJ_P0026921 Mgat4c protein_coding protein_coding MGP_LPJ_T0026922.1 MGP_LPJ_G0017610.1 mouse_genomes_project 10 104226706 104981618 + MGP_LPJ_P0026922 Mgat4c protein_coding protein_coding MGP_LPJ_T0026923.1 MGP_LPJ_G0017610.1 mouse_genomes_project 10 104739446 104984906 + MGP_LPJ_P0026923 Mgat4c protein_coding protein_coding MGP_LPJ_T0026924.1 MGP_LPJ_G0017610.1 mouse_genomes_project 10 104739446 104987999 + MGP_LPJ_P0026924 Mgat4c protein_coding protein_coding MGP_LPJ_T0026925.1 MGP_LPJ_G0017610.1 mouse_genomes_project 10 104739466 104858314 + Mgat4c protein_coding processed_transcript MGP_LPJ_T0026926.1 MGP_LPJ_G0017610.1 mouse_genomes_project 10 104739477 104971213 + MGP_LPJ_P0026926 Mgat4c protein_coding protein_coding MGP_LPJ_T0026927.1 MGP_LPJ_G0017610.1 mouse_genomes_project 10 104739493 104858315 + Mgat4c protein_coding processed_transcript MGP_LPJ_T0026928.1 MGP_LPJ_G0017610.1 mouse_genomes_project 10 104739667 104987999 + MGP_LPJ_P0026928 Mgat4c protein_coding protein_coding MGP_LPJ_T0026929.1 MGP_LPJ_G0017610.1 mouse_genomes_project 10 104967428 104986843 + MGP_LPJ_P0026929 Mgat4c protein_coding protein_coding MGP_LPJ_T0003065.1 MGP_LPJ_G0002864.1 mouse_genomes_project 10 71494490 71495266 + Gm15647 antisense antisense MGP_LPJ_T0027222.1 MGP_LPJ_G0017713.1 mouse_genomes_project 10 131186355 131188337 + MGP_LPJ_P0027222 Mettl1 protein_coding protein_coding MGP_LPJ_T0027223.1 MGP_LPJ_G0017713.1 mouse_genomes_project 10 131186898 131189157 + Mettl1 protein_coding retained_intron MGP_LPJ_T0027224.1 MGP_LPJ_G0017713.1 mouse_genomes_project 10 131186899 131190769 + MGP_LPJ_P0027224 Mettl1 protein_coding protein_coding MGP_LPJ_T0027225.1 MGP_LPJ_G0017713.1 mouse_genomes_project 10 131186920 131194611 + MGP_LPJ_P0027225 Mettl1 protein_coding unknown_likely_coding MGP_LPJ_T0027226.1 MGP_LPJ_G0017713.1 mouse_genomes_project 10 131186924 131192995 + MGP_LPJ_P0027226 Mettl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0027500.1 MGP_LPJ_G0017813.1 mouse_genomes_project 10 133652917 133666838 + MGP_LPJ_P0027500 Olfr774 protein_coding protein_coding MGP_LPJ_T0026182.1 MGP_LPJ_G0017412.1 mouse_genomes_project 10 81459387 81466716 - MGP_LPJ_P0026182 Mex3d protein_coding protein_coding MGP_LPJ_T0026183.1 MGP_LPJ_G0017412.1 mouse_genomes_project 10 81459389 81466708 - MGP_LPJ_P0026183 Mex3d protein_coding protein_coding MGP_LPJ_T0026184.1 MGP_LPJ_G0017412.1 mouse_genomes_project 10 81459486 81461020 - MGP_LPJ_P0026184 Mex3d protein_coding protein_coding MGP_LPJ_T0027117.1 MGP_LPJ_G0017682.1 mouse_genomes_project 10 123093136 123773302 + MGP_LPJ_P0027117 Grip1 protein_coding protein_coding MGP_LPJ_T0027118.1 MGP_LPJ_G0017682.1 mouse_genomes_project 10 123094181 123760632 + MGP_LPJ_P0027118 Grip1 protein_coding protein_coding MGP_LPJ_T0027119.1 MGP_LPJ_G0017682.1 mouse_genomes_project 10 123094187 123762176 + MGP_LPJ_P0027119 Grip1 protein_coding protein_coding MGP_LPJ_T0027120.1 MGP_LPJ_G0017682.1 mouse_genomes_project 10 123480927 123762176 + MGP_LPJ_P0027120 Grip1 protein_coding protein_coding MGP_LPJ_T0027121.1 MGP_LPJ_G0017682.1 mouse_genomes_project 10 123480936 123761552 + MGP_LPJ_P0027121 Grip1 protein_coding protein_coding MGP_LPJ_T0027122.1 MGP_LPJ_G0017682.1 mouse_genomes_project 10 123481043 123689221 + Grip1 protein_coding retained_intron MGP_LPJ_T0027123.1 MGP_LPJ_G0017682.1 mouse_genomes_project 10 123481050 123760632 + MGP_LPJ_P0027123 Grip1 protein_coding protein_coding MGP_LPJ_T0027124.1 MGP_LPJ_G0017682.1 mouse_genomes_project 10 123481050 123760632 + MGP_LPJ_P0027124 Grip1 protein_coding protein_coding MGP_LPJ_T0027125.1 MGP_LPJ_G0017682.1 mouse_genomes_project 10 123481053 123760552 + MGP_LPJ_P0027125 Grip1 protein_coding protein_coding MGP_LPJ_T0027126.1 MGP_LPJ_G0017682.1 mouse_genomes_project 10 123481063 123773101 + MGP_LPJ_P0027126 Grip1 protein_coding protein_coding MGP_LPJ_T0027127.1 MGP_LPJ_G0017682.1 mouse_genomes_project 10 123515925 123762171 + Grip1 protein_coding retained_intron MGP_LPJ_T0027128.1 MGP_LPJ_G0017682.1 mouse_genomes_project 10 123576939 123760552 + Grip1 protein_coding processed_transcript MGP_LPJ_T0027129.1 MGP_LPJ_G0017682.1 mouse_genomes_project 10 123669914 123773303 + MGP_LPJ_P0027129 Grip1 protein_coding protein_coding MGP_LPJ_T0027130.1 MGP_LPJ_G0017682.1 mouse_genomes_project 10 123670116 123762047 + MGP_LPJ_P0027130 Grip1 protein_coding protein_coding MGP_LPJ_T0027131.1 MGP_LPJ_G0017682.1 mouse_genomes_project 10 123670264 123760828 + MGP_LPJ_P0027131 Grip1 protein_coding protein_coding MGP_LPJ_T0027132.1 MGP_LPJ_G0017682.1 mouse_genomes_project 10 123670300 123773302 + MGP_LPJ_P0027132 Grip1 protein_coding nonsense_mediated_decay MGP_LPJ_T0027560.1 MGP_LPJ_G0017856.1 mouse_genomes_project 10 134672973 134676609 - MGP_LPJ_P0027560 Olfr825 protein_coding protein_coding MGP_LPJ_T0100059.1 MGP_LPJ_G0038322.1 mouse_genomes_project 10 11537342 11537453 + Gm24343 snoRNA snoRNA MGP_LPJ_T0098366.1 MGP_LPJ_G0036647.1 mouse_genomes_project 10 2018863 2019145 - Gm25694 ribozyme ribozyme MGP_LPJ_T0006173.1 MGP_LPJ_G0005155.1 mouse_genomes_project 10 114576280 114577368 - Gm28592 lincRNA lincRNA MGP_LPJ_T0003126.1 MGP_LPJ_G0002909.1 mouse_genomes_project 10 131864316 131865961 + Gm16229 antisense antisense MGP_LPJ_T0024463.1 MGP_LPJ_G0016923.1 mouse_genomes_project 10 6882455 7037400 - MGP_LPJ_P0024463 protein_coding protein_coding MGP_LPJ_T0024464.1 MGP_LPJ_G0016923.1 mouse_genomes_project 10 6886857 7037796 - MGP_LPJ_P0024464 protein_coding protein_coding MGP_LPJ_T0024465.1 MGP_LPJ_G0016923.1 mouse_genomes_project 10 6886895 6924906 - protein_coding processed_transcript MGP_LPJ_T0024466.1 MGP_LPJ_G0016923.1 mouse_genomes_project 10 6887480 6907202 - protein_coding retained_intron MGP_LPJ_T0024467.1 MGP_LPJ_G0016923.1 mouse_genomes_project 10 6887812 7037400 - MGP_LPJ_P0024467 protein_coding protein_coding MGP_LPJ_T0024468.1 MGP_LPJ_G0016923.1 mouse_genomes_project 10 6893994 6897416 - protein_coding retained_intron MGP_LPJ_T0024469.1 MGP_LPJ_G0016923.1 mouse_genomes_project 10 6893997 6895844 - protein_coding retained_intron MGP_LPJ_T0024470.1 MGP_LPJ_G0016923.1 mouse_genomes_project 10 6894104 6905177 - protein_coding retained_intron MGP_LPJ_T0024471.1 MGP_LPJ_G0016923.1 mouse_genomes_project 10 6896332 6925066 - MGP_LPJ_P0024471 protein_coding protein_coding MGP_LPJ_T0024472.1 MGP_LPJ_G0016923.1 mouse_genomes_project 10 6896498 6905177 - protein_coding retained_intron MGP_LPJ_T0024473.1 MGP_LPJ_G0016923.1 mouse_genomes_project 10 6915906 6925037 - protein_coding retained_intron MGP_LPJ_T0027024.1 MGP_LPJ_G0017651.1 mouse_genomes_project 10 118676391 118728040 + MGP_LPJ_P0027024 Zfc3h1 protein_coding protein_coding MGP_LPJ_T0027025.1 MGP_LPJ_G0017651.1 mouse_genomes_project 10 118721085 118728039 + Zfc3h1 protein_coding retained_intron MGP_LPJ_T0027026.1 MGP_LPJ_G0017651.1 mouse_genomes_project 10 118722287 118726142 + Zfc3h1 protein_coding retained_intron MGP_LPJ_T0027027.1 MGP_LPJ_G0017651.1 mouse_genomes_project 10 118726346 118727030 + Zfc3h1 protein_coding retained_intron MGP_LPJ_T0027460.1 MGP_LPJ_G0017790.1 mouse_genomes_project 10 133057203 133064362 - MGP_LPJ_P0027460 Cdk2 protein_coding protein_coding MGP_LPJ_T0027461.1 MGP_LPJ_G0017790.1 mouse_genomes_project 10 133057203 133064362 - MGP_LPJ_P0027461 Cdk2 protein_coding protein_coding MGP_LPJ_T0100089.1 MGP_LPJ_G0038352.1 mouse_genomes_project 10 78760255 78760331 - Gm22394 snoRNA snoRNA MGP_LPJ_T0024723.1 MGP_LPJ_G0017004.1 mouse_genomes_project 10 22022341 22025388 + MGP_LPJ_P0024723 protein_coding protein_coding MGP_LPJ_T0009661.1 MGP_LPJ_G0007779.1 mouse_genomes_project 10 132926146 132926207 - Mir6917 miRNA miRNA MGP_LPJ_T0024628.1 MGP_LPJ_G0016965.1 mouse_genomes_project 10 17374493 17378036 - MGP_LPJ_P0024628 Slc35d3 protein_coding protein_coding MGP_LPJ_T0000858.1 MGP_LPJ_G0000788.1 mouse_genomes_project 10 89006492 89008827 + TEC TEC MGP_LPJ_T0000859.1 MGP_LPJ_G0000788.1 mouse_genomes_project 10 89007732 89008110 + TEC TEC MGP_LPJ_T0025693.1 MGP_LPJ_G0017273.1 mouse_genomes_project 10 76461471 76464636 - MGP_LPJ_P0025693 Ddt protein_coding protein_coding MGP_LPJ_T0025694.1 MGP_LPJ_G0017273.1 mouse_genomes_project 10 76461474 76465016 - MGP_LPJ_P0025694 Ddt protein_coding protein_coding MGP_LPJ_T0025189.1 MGP_LPJ_G0017168.1 mouse_genomes_project 10 58863843 58914701 + MGP_LPJ_P0025189 P4ha1 protein_coding protein_coding MGP_LPJ_T0025190.1 MGP_LPJ_G0017168.1 mouse_genomes_project 10 58863911 58913354 + MGP_LPJ_P0025190 P4ha1 protein_coding protein_coding MGP_LPJ_T0025191.1 MGP_LPJ_G0017168.1 mouse_genomes_project 10 58863915 58913649 + MGP_LPJ_P0025191 P4ha1 protein_coding protein_coding MGP_LPJ_T0025112.1 MGP_LPJ_G0017138.1 mouse_genomes_project 10 51656765 51683712 + MGP_LPJ_P0025112 Nus1 protein_coding protein_coding MGP_LPJ_T0025113.1 MGP_LPJ_G0017138.1 mouse_genomes_project 10 51668149 51672591 + MGP_LPJ_P0025113 Nus1 protein_coding protein_coding MGP_LPJ_T0024687.1 MGP_LPJ_G0016981.1 mouse_genomes_project 10 19850520 20098178 + MGP_LPJ_P0024687 protein_coding protein_coding MGP_LPJ_T0024690.1 MGP_LPJ_G0016981.1 mouse_genomes_project 10 20088018 20098175 + MGP_LPJ_P0024690 protein_coding protein_coding MGP_LPJ_T0024691.1 MGP_LPJ_G0016981.1 mouse_genomes_project 10 20088416 20098178 + MGP_LPJ_P0024691 protein_coding protein_coding MGP_LPJ_T0006104.1 MGP_LPJ_G0005108.1 mouse_genomes_project 10 19347719 19350859 + Gm29323 lincRNA lincRNA MGP_LPJ_T0006129.1 MGP_LPJ_G0005129.1 mouse_genomes_project 10 67050918 67053601 + Gm26576 lincRNA lincRNA MGP_LPJ_T0027538.1 MGP_LPJ_G0017839.1 mouse_genomes_project 10 134178913 134179910 - MGP_LPJ_P0027538 Olfr807 protein_coding protein_coding MGP_LPJ_T0101753.1 MGP_LPJ_G0039791.1 mouse_genomes_project 10 133993120 133993883 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0009660.1 MGP_LPJ_G0007778.1 mouse_genomes_project 10 132899669 132899788 - miRNA miRNA MGP_LPJ_T0027501.1 MGP_LPJ_G0017814.1 mouse_genomes_project 10 133652939 133861863 + MGP_LPJ_P0027501 Olfr775 protein_coding protein_coding MGP_LPJ_T0026103.1 MGP_LPJ_G0017396.1 mouse_genomes_project 10 81203415 81206910 + Atp5d protein_coding processed_transcript MGP_LPJ_T0026104.1 MGP_LPJ_G0017396.1 mouse_genomes_project 10 81205966 81210323 + MGP_LPJ_P0026104 Atp5d protein_coding protein_coding MGP_LPJ_T0026105.1 MGP_LPJ_G0017396.1 mouse_genomes_project 10 81206824 81210328 + MGP_LPJ_P0026105 Atp5d protein_coding protein_coding MGP_LPJ_T0026106.1 MGP_LPJ_G0017396.1 mouse_genomes_project 10 81206879 81210322 + MGP_LPJ_P0026106 Atp5d protein_coding protein_coding MGP_LPJ_T0026210.1 MGP_LPJ_G0017418.1 mouse_genomes_project 10 81636587 81641511 - protein_coding retained_intron MGP_LPJ_T0026211.1 MGP_LPJ_G0017418.1 mouse_genomes_project 10 81637938 81642477 - protein_coding retained_intron MGP_LPJ_T0026212.1 MGP_LPJ_G0017418.1 mouse_genomes_project 10 81637938 81642145 - protein_coding retained_intron MGP_LPJ_T0026213.1 MGP_LPJ_G0017418.1 mouse_genomes_project 10 81638281 81639979 - MGP_LPJ_P0026213 protein_coding nonsense_mediated_decay MGP_LPJ_T0026214.1 MGP_LPJ_G0017418.1 mouse_genomes_project 10 81641671 81645137 - MGP_LPJ_P0026214 protein_coding nonsense_mediated_decay MGP_LPJ_T0026215.1 MGP_LPJ_G0017418.1 mouse_genomes_project 10 81643001 81645135 - protein_coding processed_transcript MGP_LPJ_T0025444.1 MGP_LPJ_G0017233.1 mouse_genomes_project 10 67240427 67340421 + Jmjd1c protein_coding retained_intron MGP_LPJ_T0025445.1 MGP_LPJ_G0017233.1 mouse_genomes_project 10 67240707 67304895 + Jmjd1c protein_coding retained_intron MGP_LPJ_T0025446.1 MGP_LPJ_G0017233.1 mouse_genomes_project 10 67240794 67377817 + MGP_LPJ_P0025446 Jmjd1c protein_coding protein_coding MGP_LPJ_T0025447.1 MGP_LPJ_G0017233.1 mouse_genomes_project 10 67274080 67409905 + MGP_LPJ_P0025447 Jmjd1c protein_coding protein_coding MGP_LPJ_T0025448.1 MGP_LPJ_G0017233.1 mouse_genomes_project 10 67274080 67409686 + MGP_LPJ_P0025448 Jmjd1c protein_coding protein_coding MGP_LPJ_T0025449.1 MGP_LPJ_G0017233.1 mouse_genomes_project 10 67334423 67367681 + Jmjd1c protein_coding retained_intron MGP_LPJ_T0025450.1 MGP_LPJ_G0017233.1 mouse_genomes_project 10 67334427 67340423 + Jmjd1c protein_coding retained_intron MGP_LPJ_T0025451.1 MGP_LPJ_G0017233.1 mouse_genomes_project 10 67369251 67369868 + Jmjd1c protein_coding retained_intron MGP_LPJ_T0025452.1 MGP_LPJ_G0017233.1 mouse_genomes_project 10 67391005 67406255 + MGP_LPJ_P0025452 Jmjd1c protein_coding protein_coding MGP_LPJ_T0025453.1 MGP_LPJ_G0017233.1 mouse_genomes_project 10 67391779 67398275 + Jmjd1c protein_coding retained_intron MGP_LPJ_T0025925.1 MGP_LPJ_G0017347.1 mouse_genomes_project 10 79912327 79938695 + MGP_LPJ_P0025925 Olfr1353 protein_coding protein_coding MGP_LPJ_T0025926.1 MGP_LPJ_G0017347.1 mouse_genomes_project 10 79912341 79938017 + MGP_LPJ_P0025926 Olfr1353 protein_coding protein_coding MGP_LPJ_T0025927.1 MGP_LPJ_G0017347.1 mouse_genomes_project 10 79937680 79938695 + MGP_LPJ_P0025927 Olfr1353 protein_coding protein_coding MGP_LPJ_T0101244.1 MGP_LPJ_G0039492.1 mouse_genomes_project 10 90522687 90524198 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101245.1 MGP_LPJ_G0039492.1 mouse_genomes_project 10 90523416 90523813 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0024712.1 MGP_LPJ_G0016993.1 mouse_genomes_project 10 21869820 21870852 + MGP_LPJ_P0024712 Taar3 protein_coding protein_coding MGP_LPJ_T0024939.1 MGP_LPJ_G0017087.1 mouse_genomes_project 10 39938954 39979966 + MGP_LPJ_P0024939 Ak9 protein_coding protein_coding MGP_LPJ_T0024940.1 MGP_LPJ_G0017087.1 mouse_genomes_project 10 39945029 40070231 + MGP_LPJ_P0024940 Ak9 protein_coding unknown_likely_coding MGP_LPJ_T0024941.1 MGP_LPJ_G0017087.1 mouse_genomes_project 10 39983388 40072570 + MGP_LPJ_P0024941 Ak9 protein_coding protein_coding MGP_LPJ_T0006120.1 MGP_LPJ_G0005124.1 mouse_genomes_project 10 63282826 63300010 + Gm16145 lincRNA lincRNA MGP_LPJ_T0100072.1 MGP_LPJ_G0038335.1 mouse_genomes_project 10 38621982 38622111 + Gm25613 snoRNA snoRNA MGP_LPJ_T0003038.1 MGP_LPJ_G0002844.1 mouse_genomes_project 10 25502246 25509599 + 4930579H20Rik antisense antisense MGP_LPJ_T0098862.1 MGP_LPJ_G0037125.1 mouse_genomes_project 10 92328385 92328480 + Gm22602 snRNA snRNA MGP_LPJ_T0025914.1 MGP_LPJ_G0017340.1 mouse_genomes_project 10 79491525 79498976 - MGP_LPJ_P0025914 Syde1 protein_coding protein_coding MGP_LPJ_T0006130.1 MGP_LPJ_G0005130.1 mouse_genomes_project 10 71738070 71741299 + Gm20609 lincRNA lincRNA MGP_LPJ_T0025386.1 MGP_LPJ_G0017218.1 mouse_genomes_project 10 62652478 62729589 - MGP_LPJ_P0025386 Tet1 protein_coding protein_coding MGP_LPJ_T0025387.1 MGP_LPJ_G0017218.1 mouse_genomes_project 10 62652485 62750396 - MGP_LPJ_P0025387 Tet1 protein_coding protein_coding MGP_LPJ_T0025388.1 MGP_LPJ_G0017218.1 mouse_genomes_project 10 62660530 62662449 - MGP_LPJ_P0025388 Tet1 protein_coding protein_coding MGP_LPJ_T0025389.1 MGP_LPJ_G0017218.1 mouse_genomes_project 10 62661034 62662450 - MGP_LPJ_P0025389 Tet1 protein_coding nonsense_mediated_decay MGP_LPJ_T0025390.1 MGP_LPJ_G0017218.1 mouse_genomes_project 10 62661256 62662448 - MGP_LPJ_P0025390 Tet1 protein_coding protein_coding MGP_LPJ_T0025391.1 MGP_LPJ_G0017218.1 mouse_genomes_project 10 62686820 62715188 - Tet1 protein_coding processed_transcript MGP_LPJ_T0003067.1 MGP_LPJ_G0002866.1 mouse_genomes_project 10 76701652 76702954 - Gm16220 antisense antisense MGP_LPJ_T0098823.1 MGP_LPJ_G0037086.1 mouse_genomes_project 10 11183751 11183858 - Gm22995 snRNA snRNA MGP_LPJ_T0025373.1 MGP_LPJ_G0017213.1 mouse_genomes_project 10 62359908 62402565 - MGP_LPJ_P0025373 Kif1bp protein_coding protein_coding MGP_LPJ_T0025374.1 MGP_LPJ_G0017213.1 mouse_genomes_project 10 62360937 62394888 - MGP_LPJ_P0025374 Kif1bp protein_coding protein_coding MGP_LPJ_T0025375.1 MGP_LPJ_G0017213.1 mouse_genomes_project 10 62382941 62402564 - MGP_LPJ_P0025375 Kif1bp protein_coding protein_coding MGP_LPJ_T0025376.1 MGP_LPJ_G0017213.1 mouse_genomes_project 10 62383015 62390594 - MGP_LPJ_P0025376 Kif1bp protein_coding nonsense_mediated_decay MGP_LPJ_T0025377.1 MGP_LPJ_G0017213.1 mouse_genomes_project 10 62384071 62388051 - Kif1bp protein_coding retained_intron MGP_LPJ_T0025378.1 MGP_LPJ_G0017213.1 mouse_genomes_project 10 62390343 62394876 - Kif1bp protein_coding retained_intron MGP_LPJ_T0025379.1 MGP_LPJ_G0017213.1 mouse_genomes_project 10 62394522 62402519 - Kif1bp protein_coding retained_intron MGP_LPJ_T0026281.1 MGP_LPJ_G0017444.1 mouse_genomes_project 10 82157058 82166423 - MGP_LPJ_P0026281 Slc39a3 protein_coding protein_coding MGP_LPJ_T0026282.1 MGP_LPJ_G0017444.1 mouse_genomes_project 10 82157060 82166305 - MGP_LPJ_P0026282 Slc39a3 protein_coding protein_coding MGP_LPJ_T0026283.1 MGP_LPJ_G0017444.1 mouse_genomes_project 10 82157061 82162405 - MGP_LPJ_P0026283 Slc39a3 protein_coding protein_coding MGP_LPJ_T0026284.1 MGP_LPJ_G0017444.1 mouse_genomes_project 10 82162349 82166279 - Slc39a3 protein_coding processed_transcript MGP_LPJ_T0026285.1 MGP_LPJ_G0017444.1 mouse_genomes_project 10 82162375 82166247 - Slc39a3 protein_coding processed_transcript MGP_LPJ_T0026359.1 MGP_LPJ_G0017465.1 mouse_genomes_project 10 82505623 82510056 - MGP_LPJ_P0026359 Hmg20b protein_coding protein_coding MGP_LPJ_T0026360.1 MGP_LPJ_G0017465.1 mouse_genomes_project 10 82505626 82509945 - Hmg20b protein_coding retained_intron MGP_LPJ_T0026361.1 MGP_LPJ_G0017465.1 mouse_genomes_project 10 82505626 82510002 - MGP_LPJ_P0026361 Hmg20b protein_coding protein_coding MGP_LPJ_T0026362.1 MGP_LPJ_G0017465.1 mouse_genomes_project 10 82505626 82510000 - MGP_LPJ_P0026362 Hmg20b protein_coding protein_coding MGP_LPJ_T0026363.1 MGP_LPJ_G0017465.1 mouse_genomes_project 10 82505626 82509767 - MGP_LPJ_P0026363 Hmg20b protein_coding protein_coding MGP_LPJ_T0026364.1 MGP_LPJ_G0017465.1 mouse_genomes_project 10 82505627 82506306 - Hmg20b protein_coding retained_intron MGP_LPJ_T0026365.1 MGP_LPJ_G0017465.1 mouse_genomes_project 10 82505627 82509903 - MGP_LPJ_P0026365 Hmg20b protein_coding protein_coding MGP_LPJ_T0026366.1 MGP_LPJ_G0017465.1 mouse_genomes_project 10 82506334 82508661 - MGP_LPJ_P0026366 Hmg20b protein_coding protein_coding MGP_LPJ_T0026367.1 MGP_LPJ_G0017465.1 mouse_genomes_project 10 82506572 82510019 - MGP_LPJ_P0026367 Hmg20b protein_coding protein_coding MGP_LPJ_T0026368.1 MGP_LPJ_G0017465.1 mouse_genomes_project 10 82506573 82507498 - Hmg20b protein_coding retained_intron MGP_LPJ_T0026369.1 MGP_LPJ_G0017465.1 mouse_genomes_project 10 82508579 82509895 - Hmg20b protein_coding processed_transcript MGP_LPJ_T0026370.1 MGP_LPJ_G0017465.1 mouse_genomes_project 10 82508621 82509893 - Hmg20b protein_coding retained_intron MGP_LPJ_T0026371.1 MGP_LPJ_G0017465.1 mouse_genomes_project 10 82508631 82510020 - Hmg20b protein_coding processed_transcript MGP_LPJ_T0009613.1 MGP_LPJ_G0007731.1 mouse_genomes_project 10 79426158 79426280 + Gm27541 miRNA miRNA MGP_LPJ_T0026478.1 MGP_LPJ_G0017484.1 mouse_genomes_project 10 83350131 83351651 + MGP_LPJ_P0026478 protein_coding protein_coding MGP_LPJ_T0025219.1 MGP_LPJ_G0017175.1 mouse_genomes_project 10 59519006 59521102 - MGP_LPJ_P0025219 Ddit4 protein_coding protein_coding MGP_LPJ_T0026997.1 MGP_LPJ_G0017637.1 mouse_genomes_project 10 115075022 115090822 + MGP_LPJ_P0026997 Krr1 protein_coding protein_coding MGP_LPJ_T0026998.1 MGP_LPJ_G0017637.1 mouse_genomes_project 10 115075115 115078874 + Krr1 protein_coding retained_intron MGP_LPJ_T0026999.1 MGP_LPJ_G0017637.1 mouse_genomes_project 10 115075133 115089157 + Krr1 protein_coding retained_intron MGP_LPJ_T0027000.1 MGP_LPJ_G0017637.1 mouse_genomes_project 10 115075151 115086944 + MGP_LPJ_P0027000 Krr1 protein_coding protein_coding MGP_LPJ_T0026689.1 MGP_LPJ_G0017546.1 mouse_genomes_project 10 90540220 90620511 - MGP_LPJ_P0026689 Utp20 protein_coding protein_coding MGP_LPJ_T0026151.1 MGP_LPJ_G0017405.1 mouse_genomes_project 10 81363861 81365523 + MGP_LPJ_P0026151 Rps15 protein_coding protein_coding MGP_LPJ_T0026152.1 MGP_LPJ_G0017405.1 mouse_genomes_project 10 81364053 81365496 + MGP_LPJ_P0026152 Rps15 protein_coding protein_coding MGP_LPJ_T0024766.1 MGP_LPJ_G0017019.1 mouse_genomes_project 10 24326381 24431285 - MGP_LPJ_P0024766 L3mbtl3 protein_coding protein_coding MGP_LPJ_T0024767.1 MGP_LPJ_G0017019.1 mouse_genomes_project 10 24326384 24431285 - MGP_LPJ_P0024767 L3mbtl3 protein_coding protein_coding MGP_LPJ_T0024768.1 MGP_LPJ_G0017019.1 mouse_genomes_project 10 24327365 24432582 - MGP_LPJ_P0024768 L3mbtl3 protein_coding protein_coding MGP_LPJ_T0027201.1 MGP_LPJ_G0017705.1 mouse_genomes_project 10 127152766 127663059 + MGP_LPJ_P0027201 Fam19a2 protein_coding protein_coding MGP_LPJ_T0027346.1 MGP_LPJ_G0017753.1 mouse_genomes_project 10 132150937 132158914 - MGP_LPJ_P0027346 Rdh7 protein_coding protein_coding MGP_LPJ_T0027347.1 MGP_LPJ_G0017753.1 mouse_genomes_project 10 132157570 132158427 - Rdh7 protein_coding processed_transcript MGP_LPJ_T0027152.1 MGP_LPJ_G0017687.1 mouse_genomes_project 10 124070279 124193920 - MGP_LPJ_P0027152 Hmga2 protein_coding protein_coding MGP_LPJ_T0027153.1 MGP_LPJ_G0017687.1 mouse_genomes_project 10 124070279 124193920 - MGP_LPJ_P0027153 Hmga2 protein_coding protein_coding MGP_LPJ_T0027154.1 MGP_LPJ_G0017687.1 mouse_genomes_project 10 124187741 124193743 - Hmga2 protein_coding retained_intron MGP_LPJ_T0006112.1 MGP_LPJ_G0005116.1 mouse_genomes_project 10 40253100 40256031 - Gm29095 lincRNA lincRNA MGP_LPJ_T0098104.1 MGP_LPJ_G0036385.1 mouse_genomes_project 10 29556374 29556487 - n-R5s76 rRNA rRNA MGP_LPJ_T0027244.1 MGP_LPJ_G0017720.1 mouse_genomes_project 10 131319028 131326221 + MGP_LPJ_P0027244 B4galnt1 protein_coding protein_coding MGP_LPJ_T0006115.1 MGP_LPJ_G0005119.1 mouse_genomes_project 10 56936203 56944161 - 4930467K11Rik lincRNA lincRNA MGP_LPJ_T0025381.1 MGP_LPJ_G0017215.1 mouse_genomes_project 10 62442529 62492647 - MGP_LPJ_P0025381 Ddx50 protein_coding protein_coding MGP_LPJ_T0026239.1 MGP_LPJ_G0017428.1 mouse_genomes_project 10 81815327 81850442 - MGP_LPJ_P0026239 Ap3d1 protein_coding protein_coding MGP_LPJ_T0027434.1 MGP_LPJ_G0017782.1 mouse_genomes_project 10 132877805 132883618 - MGP_LPJ_P0027434 Zc3h10 protein_coding protein_coding MGP_LPJ_T0027435.1 MGP_LPJ_G0017782.1 mouse_genomes_project 10 132880640 132883587 - Zc3h10 protein_coding processed_transcript MGP_LPJ_T0027436.1 MGP_LPJ_G0017782.1 mouse_genomes_project 10 132880922 132883483 - Zc3h10 protein_coding processed_transcript MGP_LPJ_T0027437.1 MGP_LPJ_G0017782.1 mouse_genomes_project 10 132881180 132883569 - Zc3h10 protein_coding processed_transcript MGP_LPJ_T0098860.1 MGP_LPJ_G0037123.1 mouse_genomes_project 10 89910015 89910130 - Gm26357 snRNA snRNA MGP_LPJ_T0098833.1 MGP_LPJ_G0037096.1 mouse_genomes_project 10 40020124 40020231 + Gm25626 snRNA snRNA MGP_LPJ_T0024326.1 MGP_LPJ_G0016893.1 mouse_genomes_project 10 1356115 1378583 - MGP_LPJ_P0024326 Zbtb2 protein_coding protein_coding MGP_LPJ_T0025707.1 MGP_LPJ_G0017279.1 mouse_genomes_project 10 76557162 76558107 - MGP_LPJ_P0025707 Mif protein_coding protein_coding MGP_LPJ_T0009604.1 MGP_LPJ_G0007722.1 mouse_genomes_project 10 61988393 61988454 - Mir7662 miRNA miRNA MGP_LPJ_T0101754.1 MGP_LPJ_G0039792.1 mouse_genomes_project 10 134028128 134028543 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0012429.1 MGP_LPJ_G0010520.1 mouse_genomes_project 10 88697613 88698022 + processed_pseudogene processed_pseudogene MGP_LPJ_T0027480.1 MGP_LPJ_G0017802.1 mouse_genomes_project 10 133296579 133302223 - MGP_LPJ_P0027480 Bloc1s1 protein_coding protein_coding MGP_LPJ_T0027483.1 MGP_LPJ_G0017802.1 mouse_genomes_project 10 133298612 133302223 - MGP_LPJ_P0027483 Bloc1s1 protein_coding protein_coding MGP_LPJ_T0027484.1 MGP_LPJ_G0017802.1 mouse_genomes_project 10 133298645 133302735 - MGP_LPJ_P0027484 Bloc1s1 protein_coding protein_coding MGP_LPJ_T0027485.1 MGP_LPJ_G0017802.1 mouse_genomes_project 10 133298741 133301725 - Bloc1s1 protein_coding processed_transcript MGP_LPJ_T0027486.1 MGP_LPJ_G0017802.1 mouse_genomes_project 10 133301214 133302223 - Bloc1s1 protein_coding retained_intron MGP_LPJ_T0026873.1 MGP_LPJ_G0017587.1 mouse_genomes_project 10 97881401 97881862 - MGP_LPJ_P0026873 Anapc15-ps protein_coding protein_coding MGP_LPJ_T0024311.1 MGP_LPJ_G0016888.1 mouse_genomes_project 10 283959 398511 + MGP_LPJ_P0024311 Ppp1r14c protein_coding protein_coding MGP_LPJ_T0024640.1 MGP_LPJ_G0016968.1 mouse_genomes_project 10 17683120 17818492 + MGP_LPJ_P0024640 Map7 protein_coding protein_coding MGP_LPJ_T0024641.1 MGP_LPJ_G0016968.1 mouse_genomes_project 10 17683569 17821382 + MGP_LPJ_P0024641 Map7 protein_coding protein_coding MGP_LPJ_T0024642.1 MGP_LPJ_G0016968.1 mouse_genomes_project 10 17705822 17797127 + MGP_LPJ_P0024642 Map7 protein_coding unknown_likely_coding MGP_LPJ_T0011299.1 MGP_LPJ_G0009417.1 mouse_genomes_project 10 94089806 94089915 - Gm27419 misc_RNA misc_RNA MGP_LPJ_T0026585.1 MGP_LPJ_G0017520.1 mouse_genomes_project 10 87580170 87634064 - MGP_LPJ_P0026585 Bpifc protein_coding protein_coding MGP_LPJ_T0026586.1 MGP_LPJ_G0017520.1 mouse_genomes_project 10 87618118 87634025 - MGP_LPJ_P0026586 Bpifc protein_coding protein_coding MGP_LPJ_T0098846.1 MGP_LPJ_G0037109.1 mouse_genomes_project 10 62744691 62744797 - Gm26479 snRNA snRNA MGP_LPJ_T0012430.1 MGP_LPJ_G0010521.1 mouse_genomes_project 10 95716468 95716931 - processed_pseudogene processed_pseudogene MGP_LPJ_T0025469.1 MGP_LPJ_G0017239.1 mouse_genomes_project 10 68184571 68256985 + MGP_LPJ_P0025469 Rtkn2 protein_coding protein_coding MGP_LPJ_T0025470.1 MGP_LPJ_G0017239.1 mouse_genomes_project 10 68184599 68256981 + MGP_LPJ_P0025470 Rtkn2 protein_coding protein_coding MGP_LPJ_T0025471.1 MGP_LPJ_G0017239.1 mouse_genomes_project 10 68184606 68274028 + MGP_LPJ_P0025471 Rtkn2 protein_coding nonsense_mediated_decay MGP_LPJ_T0025472.1 MGP_LPJ_G0017239.1 mouse_genomes_project 10 68184699 68274031 + MGP_LPJ_P0025472 Rtkn2 protein_coding nonsense_mediated_decay MGP_LPJ_T0025473.1 MGP_LPJ_G0017239.1 mouse_genomes_project 10 68184716 68255419 + MGP_LPJ_P0025473 Rtkn2 protein_coding protein_coding MGP_LPJ_T0025474.1 MGP_LPJ_G0017239.1 mouse_genomes_project 10 68257084 68264260 + Rtkn2 protein_coding processed_transcript MGP_LPJ_T0026225.1 MGP_LPJ_G0017423.1 mouse_genomes_project 10 81723661 81741653 + MGP_LPJ_P0026225 Csnk1g2 protein_coding protein_coding MGP_LPJ_T0026226.1 MGP_LPJ_G0017423.1 mouse_genomes_project 10 81730537 81741653 + MGP_LPJ_P0026226 Csnk1g2 protein_coding protein_coding MGP_LPJ_T0026840.1 MGP_LPJ_G0017575.1 mouse_genomes_project 10 96220502 96270674 + MGP_LPJ_P0026840 Nr2c1 protein_coding protein_coding MGP_LPJ_T0026841.1 MGP_LPJ_G0017575.1 mouse_genomes_project 10 96220898 96269146 + MGP_LPJ_P0026841 Nr2c1 protein_coding protein_coding MGP_LPJ_T0026842.1 MGP_LPJ_G0017575.1 mouse_genomes_project 10 96221627 96268816 + MGP_LPJ_P0026842 Nr2c1 protein_coding unknown_likely_coding MGP_LPJ_T0026843.1 MGP_LPJ_G0017575.1 mouse_genomes_project 10 96228801 96268816 + MGP_LPJ_P0026843 Nr2c1 protein_coding protein_coding MGP_LPJ_T0026344.1 MGP_LPJ_G0017459.1 mouse_genomes_project 10 82426083 82431158 + MGP_LPJ_P0026344 Apba3 protein_coding protein_coding MGP_LPJ_T0006163.1 MGP_LPJ_G0005147.1 mouse_genomes_project 10 94124157 94335179 - Gm20757 lincRNA lincRNA MGP_LPJ_T0025898.1 MGP_LPJ_G0017334.1 mouse_genomes_project 10 79148004 79236060 - MGP_LPJ_P0025898 Agpat3 protein_coding protein_coding MGP_LPJ_T0025899.1 MGP_LPJ_G0017334.1 mouse_genomes_project 10 79150389 79235483 - MGP_LPJ_P0025899 Agpat3 protein_coding protein_coding MGP_LPJ_T0025900.1 MGP_LPJ_G0017334.1 mouse_genomes_project 10 79150389 79177054 - MGP_LPJ_P0025900 Agpat3 protein_coding protein_coding MGP_LPJ_T0025901.1 MGP_LPJ_G0017334.1 mouse_genomes_project 10 79150389 79235671 - MGP_LPJ_P0025901 Agpat3 protein_coding protein_coding MGP_LPJ_T0025902.1 MGP_LPJ_G0017334.1 mouse_genomes_project 10 79150389 79235318 - MGP_LPJ_P0025902 Agpat3 protein_coding protein_coding MGP_LPJ_T0025903.1 MGP_LPJ_G0017334.1 mouse_genomes_project 10 79152437 79174250 - MGP_LPJ_P0025903 Agpat3 protein_coding protein_coding MGP_LPJ_T0025904.1 MGP_LPJ_G0017334.1 mouse_genomes_project 10 79152440 79157263 - Agpat3 protein_coding retained_intron MGP_LPJ_T0025905.1 MGP_LPJ_G0017334.1 mouse_genomes_project 10 79163092 79199538 - MGP_LPJ_P0025905 Agpat3 protein_coding protein_coding MGP_LPJ_T0025906.1 MGP_LPJ_G0017334.1 mouse_genomes_project 10 79163138 79186406 - MGP_LPJ_P0025906 Agpat3 protein_coding protein_coding MGP_LPJ_T0025907.1 MGP_LPJ_G0017334.1 mouse_genomes_project 10 79166680 79236107 - MGP_LPJ_P0025907 Agpat3 protein_coding protein_coding MGP_LPJ_T0025908.1 MGP_LPJ_G0017334.1 mouse_genomes_project 10 79166691 79235830 - MGP_LPJ_P0025908 Agpat3 protein_coding protein_coding MGP_LPJ_T0026960.1 MGP_LPJ_G0017622.1 mouse_genomes_project 10 110295791 110299036 - MGP_LPJ_P0026960 Myf5 protein_coding protein_coding MGP_LPJ_T0025824.1 MGP_LPJ_G0017311.1 mouse_genomes_project 10 78408176 78443935 + MGP_LPJ_P0025824 Sumo3 protein_coding nonsense_mediated_decay MGP_LPJ_T0025825.1 MGP_LPJ_G0017311.1 mouse_genomes_project 10 78408188 78419233 + MGP_LPJ_P0025825 Sumo3 protein_coding nonsense_mediated_decay MGP_LPJ_T0025826.1 MGP_LPJ_G0017311.1 mouse_genomes_project 10 78408204 78418830 + MGP_LPJ_P0025826 Sumo3 protein_coding protein_coding MGP_LPJ_T0025827.1 MGP_LPJ_G0017311.1 mouse_genomes_project 10 78408204 78419166 + MGP_LPJ_P0025827 Sumo3 protein_coding protein_coding MGP_LPJ_T0025828.1 MGP_LPJ_G0017311.1 mouse_genomes_project 10 78408300 78418781 + MGP_LPJ_P0025828 Sumo3 protein_coding protein_coding MGP_LPJ_T0025829.1 MGP_LPJ_G0017311.1 mouse_genomes_project 10 78408550 78419945 + MGP_LPJ_P0025829 Sumo3 protein_coding protein_coding MGP_LPJ_T0025830.1 MGP_LPJ_G0017311.1 mouse_genomes_project 10 78411700 78419421 + MGP_LPJ_P0025830 Sumo3 protein_coding protein_coding MGP_LPJ_T0025831.1 MGP_LPJ_G0017311.1 mouse_genomes_project 10 78417655 78418583 + Sumo3 protein_coding processed_transcript MGP_LPJ_T0024842.1 MGP_LPJ_G0017049.1 mouse_genomes_project 10 32361634 32440625 + MGP_LPJ_P0024842 Trappc3l protein_coding protein_coding MGP_LPJ_T0025180.1 MGP_LPJ_G0017163.1 mouse_genomes_project 10 58223418 58223703 + MGP_LPJ_P0025180 BB019430 protein_coding protein_coding MGP_LPJ_T0027409.1 MGP_LPJ_G0017771.1 mouse_genomes_project 10 132642165 132647414 + MGP_LPJ_P0027409 Cnpy2 protein_coding protein_coding MGP_LPJ_T0025214.1 MGP_LPJ_G0017174.1 mouse_genomes_project 10 59441165 59460894 + MGP_LPJ_P0025214 Dnajb12 protein_coding protein_coding MGP_LPJ_T0025215.1 MGP_LPJ_G0017174.1 mouse_genomes_project 10 59441173 59459622 + MGP_LPJ_P0025215 Dnajb12 protein_coding nonsense_mediated_decay MGP_LPJ_T0025216.1 MGP_LPJ_G0017174.1 mouse_genomes_project 10 59441184 59460888 + MGP_LPJ_P0025216 Dnajb12 protein_coding protein_coding MGP_LPJ_T0025217.1 MGP_LPJ_G0017174.1 mouse_genomes_project 10 59441227 59458383 + MGP_LPJ_P0025217 Dnajb12 protein_coding protein_coding MGP_LPJ_T0025218.1 MGP_LPJ_G0017174.1 mouse_genomes_project 10 59441235 59460129 + MGP_LPJ_P0025218 Dnajb12 protein_coding protein_coding MGP_LPJ_T0024815.1 MGP_LPJ_G0017035.1 mouse_genomes_project 10 29059857 29070290 - MGP_LPJ_P0024815 Hey2 protein_coding protein_coding MGP_LPJ_T0009644.1 MGP_LPJ_G0007762.1 mouse_genomes_project 10 125436961 125437037 - Gm24330 miRNA miRNA MGP_LPJ_T0026227.1 MGP_LPJ_G0017424.1 mouse_genomes_project 10 81745612 81763815 - MGP_LPJ_P0026227 Btbd2 protein_coding protein_coding MGP_LPJ_T0026228.1 MGP_LPJ_G0017424.1 mouse_genomes_project 10 81745612 81763238 - MGP_LPJ_P0026228 Btbd2 protein_coding protein_coding MGP_LPJ_T0026229.1 MGP_LPJ_G0017424.1 mouse_genomes_project 10 81745618 81748658 - Btbd2 protein_coding retained_intron MGP_LPJ_T0026230.1 MGP_LPJ_G0017424.1 mouse_genomes_project 10 81748125 81752726 - Btbd2 protein_coding retained_intron MGP_LPJ_T0026231.1 MGP_LPJ_G0017424.1 mouse_genomes_project 10 81748663 81762882 - MGP_LPJ_P0026231 Btbd2 protein_coding protein_coding MGP_LPJ_T0006133.1 MGP_LPJ_G0005133.1 mouse_genomes_project 10 78735835 78738533 + 1700009J07Rik lincRNA lincRNA MGP_LPJ_T0006134.1 MGP_LPJ_G0005133.1 mouse_genomes_project 10 78735838 78738530 + 1700009J07Rik lincRNA lincRNA MGP_LPJ_T0006135.1 MGP_LPJ_G0005133.1 mouse_genomes_project 10 78735846 78736930 + 1700009J07Rik lincRNA lincRNA MGP_LPJ_T0027410.1 MGP_LPJ_G0017772.1 mouse_genomes_project 10 132657672 132686988 + MGP_LPJ_P0027410 Cs protein_coding protein_coding MGP_LPJ_T0026114.1 MGP_LPJ_G0017398.1 mouse_genomes_project 10 81231295 81235605 + MGP_LPJ_P0026114 Cirbp protein_coding protein_coding MGP_LPJ_T0026115.1 MGP_LPJ_G0017398.1 mouse_genomes_project 10 81233050 81236944 + MGP_LPJ_P0026115 Cirbp protein_coding protein_coding MGP_LPJ_T0026116.1 MGP_LPJ_G0017398.1 mouse_genomes_project 10 81233112 81238086 + MGP_LPJ_P0026116 Cirbp protein_coding protein_coding MGP_LPJ_T0026117.1 MGP_LPJ_G0017398.1 mouse_genomes_project 10 81233135 81235418 + Cirbp protein_coding retained_intron MGP_LPJ_T0026118.1 MGP_LPJ_G0017398.1 mouse_genomes_project 10 81233158 81236426 + Cirbp protein_coding retained_intron MGP_LPJ_T0026119.1 MGP_LPJ_G0017398.1 mouse_genomes_project 10 81235515 81236493 + Cirbp protein_coding retained_intron MGP_LPJ_T0026120.1 MGP_LPJ_G0017398.1 mouse_genomes_project 10 81237270 81237987 + Cirbp protein_coding retained_intron MGP_LPJ_T0006108.1 MGP_LPJ_G0005112.1 mouse_genomes_project 10 32632303 32635299 - Gm26564 lincRNA lincRNA MGP_LPJ_T0100074.1 MGP_LPJ_G0038337.1 mouse_genomes_project 10 38786622 38786835 + Rnu3a snoRNA snoRNA MGP_LPJ_T0025155.1 MGP_LPJ_G0017153.1 mouse_genomes_project 10 57264296 57267866 + MGP_LPJ_P0025155 Fabp7 protein_coding protein_coding MGP_LPJ_T0025156.1 MGP_LPJ_G0017153.1 mouse_genomes_project 10 57264338 57266228 + MGP_LPJ_P0025156 Fabp7 protein_coding protein_coding MGP_LPJ_T0025364.1 MGP_LPJ_G0017210.1 mouse_genomes_project 10 62266603 62268437 + MGP_LPJ_P0025364 4930507D05Rik protein_coding protein_coding MGP_LPJ_T0026646.1 MGP_LPJ_G0017537.1 mouse_genomes_project 10 89890723 89923429 + MGP_LPJ_P0026646 Nup37 protein_coding protein_coding MGP_LPJ_T0026647.1 MGP_LPJ_G0017537.1 mouse_genomes_project 10 89890802 89923429 + MGP_LPJ_P0026647 Nup37 protein_coding protein_coding MGP_LPJ_T0006088.1 MGP_LPJ_G0005097.1 mouse_genomes_project 10 1382064 1386902 + Gm21781 lincRNA lincRNA MGP_LPJ_T0009609.1 MGP_LPJ_G0007727.1 mouse_genomes_project 10 79221990 79222048 - Mir7659 miRNA miRNA MGP_LPJ_T0025177.1 MGP_LPJ_G0017160.1 mouse_genomes_project 10 57939380 57994233 + MGP_LPJ_P0025177 Ranbp2 protein_coding protein_coding MGP_LPJ_T0026964.1 MGP_LPJ_G0017626.1 mouse_genomes_project 10 111022408 111145329 + MGP_LPJ_P0026964 Ppp1r12a protein_coding unknown_likely_coding MGP_LPJ_T0026965.1 MGP_LPJ_G0017626.1 mouse_genomes_project 10 111022408 111145611 + MGP_LPJ_P0026965 Ppp1r12a protein_coding protein_coding MGP_LPJ_T0025962.1 MGP_LPJ_G0017362.1 mouse_genomes_project 10 80680882 80684845 + MGP_LPJ_P0025962 Madcam1 protein_coding protein_coding MGP_LPJ_T0026331.1 MGP_LPJ_G0017457.1 mouse_genomes_project 10 82410862 82420897 + MGP_LPJ_P0026331 Matk protein_coding protein_coding MGP_LPJ_T0026332.1 MGP_LPJ_G0017457.1 mouse_genomes_project 10 82415210 82421277 + MGP_LPJ_P0026332 Matk protein_coding protein_coding MGP_LPJ_T0026333.1 MGP_LPJ_G0017457.1 mouse_genomes_project 10 82415210 82421277 + MGP_LPJ_P0026333 Matk protein_coding nonsense_mediated_decay MGP_LPJ_T0026334.1 MGP_LPJ_G0017457.1 mouse_genomes_project 10 82415210 82420893 + MGP_LPJ_P0026334 Matk protein_coding protein_coding MGP_LPJ_T0026335.1 MGP_LPJ_G0017457.1 mouse_genomes_project 10 82415216 82420893 + MGP_LPJ_P0026335 Matk protein_coding protein_coding MGP_LPJ_T0026336.1 MGP_LPJ_G0017457.1 mouse_genomes_project 10 82415253 82420897 + Matk protein_coding retained_intron MGP_LPJ_T0026337.1 MGP_LPJ_G0017457.1 mouse_genomes_project 10 82415359 82418438 + Matk protein_coding retained_intron MGP_LPJ_T0026338.1 MGP_LPJ_G0017457.1 mouse_genomes_project 10 82415741 82417565 + MGP_LPJ_P0026338 Matk protein_coding protein_coding MGP_LPJ_T0026339.1 MGP_LPJ_G0017457.1 mouse_genomes_project 10 82415829 82420887 + MGP_LPJ_P0026339 Matk protein_coding protein_coding MGP_LPJ_T0026340.1 MGP_LPJ_G0017457.1 mouse_genomes_project 10 82416126 82420825 + Matk protein_coding retained_intron MGP_LPJ_T0026341.1 MGP_LPJ_G0017457.1 mouse_genomes_project 10 82419081 82420579 + Matk protein_coding retained_intron MGP_LPJ_T0009654.1 MGP_LPJ_G0007772.1 mouse_genomes_project 10 132704260 132704329 - Gm26308 miRNA miRNA MGP_LPJ_T0026521.1 MGP_LPJ_G0017498.1 mouse_genomes_project 10 84798752 84808155 + MGP_LPJ_P0026521 D10Wsu102e protein_coding protein_coding MGP_LPJ_T0101747.1 MGP_LPJ_G0039785.1 mouse_genomes_project 10 108248210 108248394 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0024461.1 MGP_LPJ_G0016921.1 mouse_genomes_project 10 6649647 6652789 - MGP_LPJ_P0024461 Gm9930 protein_coding protein_coding MGP_LPJ_T0027363.1 MGP_LPJ_G0017759.1 mouse_genomes_project 10 132374848 132381975 + MGP_LPJ_P0027363 Atp5b protein_coding protein_coding MGP_LPJ_T0027364.1 MGP_LPJ_G0017759.1 mouse_genomes_project 10 132374881 132375662 + Atp5b protein_coding processed_transcript MGP_LPJ_T0027365.1 MGP_LPJ_G0017759.1 mouse_genomes_project 10 132376008 132377524 + Atp5b protein_coding retained_intron MGP_LPJ_T0027366.1 MGP_LPJ_G0017759.1 mouse_genomes_project 10 132377320 132381744 + Atp5b protein_coding retained_intron MGP_LPJ_T0027367.1 MGP_LPJ_G0017759.1 mouse_genomes_project 10 132377804 132380736 + Atp5b protein_coding processed_transcript MGP_LPJ_T0027368.1 MGP_LPJ_G0017759.1 mouse_genomes_project 10 132379264 132380635 + Atp5b protein_coding retained_intron MGP_LPJ_T0027369.1 MGP_LPJ_G0017759.1 mouse_genomes_project 10 132380074 132381265 + Atp5b protein_coding retained_intron MGP_LPJ_T0027370.1 MGP_LPJ_G0017759.1 mouse_genomes_project 10 132380135 132381857 + Atp5b protein_coding processed_transcript MGP_LPJ_T0027371.1 MGP_LPJ_G0017759.1 mouse_genomes_project 10 132380624 132381856 + Atp5b protein_coding processed_transcript MGP_LPJ_T0003128.1 MGP_LPJ_G0002911.1 mouse_genomes_project 10 132718144 132721871 - Gm17201 antisense antisense MGP_LPJ_T0003041.1 MGP_LPJ_G0002847.1 mouse_genomes_project 10 38037288 38071752 - Gm16365 antisense antisense MGP_LPJ_T0003042.1 MGP_LPJ_G0002847.1 mouse_genomes_project 10 38038817 38098932 - Gm16365 antisense antisense MGP_LPJ_T0003043.1 MGP_LPJ_G0002847.1 mouse_genomes_project 10 38041172 38098936 - Gm16365 antisense antisense MGP_LPJ_T0003044.1 MGP_LPJ_G0002847.1 mouse_genomes_project 10 38080185 38098947 - Gm16365 antisense antisense MGP_LPJ_T0025162.1 MGP_LPJ_G0017157.1 mouse_genomes_project 10 57714264 57715853 - MGP_LPJ_P0025162 Gm4981 protein_coding protein_coding MGP_LPJ_T0006127.1 MGP_LPJ_G0005127.1 mouse_genomes_project 10 66735621 66736565 + Gm28139 lincRNA lincRNA MGP_LPJ_T0000374.1 MGP_LPJ_G0000312.1 mouse_genomes_project 10 86551694 86551762 + mt-Tp Mt_tRNA Mt_tRNA MGP_LPJ_T0027036.1 MGP_LPJ_G0017653.1 mouse_genomes_project 10 118869986 118883010 + MGP_LPJ_P0027036 A930009A15Rik protein_coding protein_coding MGP_LPJ_T0024627.1 MGP_LPJ_G0016964.1 mouse_genomes_project 10 17251117 17295677 + MGP_LPJ_P0024627 Il20ra protein_coding protein_coding MGP_LPJ_T0026042.1 MGP_LPJ_G0017383.1 mouse_genomes_project 10 80959293 80964595 + MGP_LPJ_P0026042 Kiss1r protein_coding protein_coding MGP_LPJ_T0100092.1 MGP_LPJ_G0038355.1 mouse_genomes_project 10 93040978 93041224 - Gm24119 snoRNA snoRNA MGP_LPJ_T0017046.1 MGP_LPJ_G0015048.1 mouse_genomes_project 10 38108484 38224451 - E130307A14Rik processed_transcript processed_transcript MGP_LPJ_T0017047.1 MGP_LPJ_G0015048.1 mouse_genomes_project 10 38108486 38224450 - E130307A14Rik processed_transcript processed_transcript MGP_LPJ_T0017048.1 MGP_LPJ_G0015048.1 mouse_genomes_project 10 38109697 38224260 - E130307A14Rik processed_transcript processed_transcript MGP_LPJ_T0017049.1 MGP_LPJ_G0015048.1 mouse_genomes_project 10 38109727 38224293 - E130307A14Rik processed_transcript processed_transcript MGP_LPJ_T0017050.1 MGP_LPJ_G0015048.1 mouse_genomes_project 10 38109770 38224445 - E130307A14Rik processed_transcript processed_transcript MGP_LPJ_T0017051.1 MGP_LPJ_G0015048.1 mouse_genomes_project 10 38109786 38224258 - E130307A14Rik processed_transcript processed_transcript MGP_LPJ_T0017052.1 MGP_LPJ_G0015048.1 mouse_genomes_project 10 38110048 38224220 - E130307A14Rik processed_transcript processed_transcript MGP_LPJ_T0017053.1 MGP_LPJ_G0015048.1 mouse_genomes_project 10 38126579 38132845 - E130307A14Rik processed_transcript processed_transcript MGP_LPJ_T0017054.1 MGP_LPJ_G0015048.1 mouse_genomes_project 10 38126671 38224426 - E130307A14Rik processed_transcript processed_transcript MGP_LPJ_T0017055.1 MGP_LPJ_G0015048.1 mouse_genomes_project 10 38142006 38220625 - E130307A14Rik processed_transcript processed_transcript MGP_LPJ_T0017056.1 MGP_LPJ_G0015048.1 mouse_genomes_project 10 38142574 38224450 - E130307A14Rik processed_transcript processed_transcript MGP_LPJ_T0017057.1 MGP_LPJ_G0015048.1 mouse_genomes_project 10 38168848 38224450 - E130307A14Rik processed_transcript processed_transcript MGP_LPJ_T0017058.1 MGP_LPJ_G0015048.1 mouse_genomes_project 10 38213912 38224411 - E130307A14Rik processed_transcript processed_transcript MGP_LPJ_T0025230.1 MGP_LPJ_G0017178.1 mouse_genomes_project 10 59683239 59721405 + Spock2 protein_coding retained_intron MGP_LPJ_T0025231.1 MGP_LPJ_G0017178.1 mouse_genomes_project 10 59683239 59730555 + MGP_LPJ_P0025231 Spock2 protein_coding protein_coding MGP_LPJ_T0025232.1 MGP_LPJ_G0017178.1 mouse_genomes_project 10 59683433 59729265 + MGP_LPJ_P0025232 Spock2 protein_coding protein_coding MGP_LPJ_T0025651.1 MGP_LPJ_G0017265.1 mouse_genomes_project 10 75992216 76180746 - MGP_LPJ_P0025651 Gucd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0025655.1 MGP_LPJ_G0017265.1 mouse_genomes_project 10 76064863 76174752 - MGP_LPJ_P0025655 Gucd1 protein_coding protein_coding MGP_LPJ_T0025657.1 MGP_LPJ_G0017265.1 mouse_genomes_project 10 76170283 76180669 - MGP_LPJ_P0025657 Gucd1 protein_coding protein_coding MGP_LPJ_T0025658.1 MGP_LPJ_G0017265.1 mouse_genomes_project 10 76172268 76180762 - MGP_LPJ_P0025658 Gucd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0025659.1 MGP_LPJ_G0017265.1 mouse_genomes_project 10 76172302 76174735 - Gucd1 protein_coding retained_intron MGP_LPJ_T0025660.1 MGP_LPJ_G0017265.1 mouse_genomes_project 10 76172435 76180643 - MGP_LPJ_P0025660 Gucd1 protein_coding protein_coding MGP_LPJ_T0025661.1 MGP_LPJ_G0017265.1 mouse_genomes_project 10 76173187 76181329 - MGP_LPJ_P0025661 Gucd1 protein_coding protein_coding MGP_LPJ_T0025662.1 MGP_LPJ_G0017265.1 mouse_genomes_project 10 76174650 76180733 - MGP_LPJ_P0025662 Gucd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0026963.1 MGP_LPJ_G0017625.1 mouse_genomes_project 10 110591853 110757846 - MGP_LPJ_P0026963 Otogl protein_coding protein_coding MGP_LPJ_T0024747.1 MGP_LPJ_G0017012.1 mouse_genomes_project 10 22906421 22917863 - MGP_LPJ_P0024747 Arg1 protein_coding protein_coding MGP_LPJ_T0027386.1 MGP_LPJ_G0017763.1 mouse_genomes_project 10 132515164 132517053 - MGP_LPJ_P0027386 Spryd4 protein_coding protein_coding MGP_LPJ_T0025639.1 MGP_LPJ_G0017261.1 mouse_genomes_project 10 75662205 75676406 + Rab36 protein_coding retained_intron MGP_LPJ_T0025640.1 MGP_LPJ_G0017261.1 mouse_genomes_project 10 75662213 75682366 + MGP_LPJ_P0025640 Rab36 protein_coding protein_coding MGP_LPJ_T0025641.1 MGP_LPJ_G0017261.1 mouse_genomes_project 10 75662231 75681721 + MGP_LPJ_P0025641 Rab36 protein_coding protein_coding MGP_LPJ_T0025642.1 MGP_LPJ_G0017261.1 mouse_genomes_project 10 75662373 75673798 + Rab36 protein_coding retained_intron MGP_LPJ_T0025643.1 MGP_LPJ_G0017261.1 mouse_genomes_project 10 75662420 75672320 + Rab36 protein_coding retained_intron MGP_LPJ_T0025644.1 MGP_LPJ_G0017261.1 mouse_genomes_project 10 75662469 75678313 + MGP_LPJ_P0025644 Rab36 protein_coding protein_coding MGP_LPJ_T0025645.1 MGP_LPJ_G0017261.1 mouse_genomes_project 10 75662983 75681679 + MGP_LPJ_P0025645 Rab36 protein_coding protein_coding MGP_LPJ_T0025646.1 MGP_LPJ_G0017261.1 mouse_genomes_project 10 75663370 75678308 + Rab36 protein_coding retained_intron MGP_LPJ_T0000847.1 MGP_LPJ_G0000777.1 mouse_genomes_project 10 16440178 16440468 - TEC TEC MGP_LPJ_T0009608.1 MGP_LPJ_G0007726.1 mouse_genomes_project 10 78443615 78443699 + Mir1930 miRNA miRNA MGP_LPJ_T0098870.1 MGP_LPJ_G0037133.1 mouse_genomes_project 10 107728977 107729143 + Gm25587 snRNA snRNA MGP_LPJ_T0026232.1 MGP_LPJ_G0017425.1 mouse_genomes_project 10 81773653 81784615 - MGP_LPJ_P0026232 Mknk2 protein_coding protein_coding MGP_LPJ_T0026233.1 MGP_LPJ_G0017425.1 mouse_genomes_project 10 81773658 81780298 - MGP_LPJ_P0026233 Mknk2 protein_coding protein_coding MGP_LPJ_T0026234.1 MGP_LPJ_G0017425.1 mouse_genomes_project 10 81778249 81780613 - MGP_LPJ_P0026234 Mknk2 protein_coding protein_coding MGP_LPJ_T0026235.1 MGP_LPJ_G0017425.1 mouse_genomes_project 10 81779931 81780573 - MGP_LPJ_P0026235 Mknk2 protein_coding protein_coding MGP_LPJ_T0026236.1 MGP_LPJ_G0017425.1 mouse_genomes_project 10 81780267 81786434 - MGP_LPJ_P0026236 Mknk2 protein_coding protein_coding MGP_LPJ_T0027487.1 MGP_LPJ_G0017803.1 mouse_genomes_project 10 133312357 133337014 + MGP_LPJ_P0027487 Itga7 protein_coding protein_coding MGP_LPJ_T0025178.1 MGP_LPJ_G0017161.1 mouse_genomes_project 10 58001299 58076539 + MGP_LPJ_P0025178 Ccdc138 protein_coding protein_coding MGP_LPJ_T0025088.1 MGP_LPJ_G0017127.1 mouse_genomes_project 10 50651825 50668273 + MGP_LPJ_P0025088 protein_coding protein_coding MGP_LPJ_T0025089.1 MGP_LPJ_G0017127.1 mouse_genomes_project 10 50651871 50667915 + protein_coding processed_transcript MGP_LPJ_T0027505.1 MGP_LPJ_G0017817.1 mouse_genomes_project 10 133727328 133732182 + MGP_LPJ_P0027505 Olfr781 protein_coding protein_coding MGP_LPJ_T0027506.1 MGP_LPJ_G0017817.1 mouse_genomes_project 10 133731246 133732182 + MGP_LPJ_P0027506 Olfr781 protein_coding protein_coding MGP_LPJ_T0003066.1 MGP_LPJ_G0002865.1 mouse_genomes_project 10 76641028 76643980 - Gm867 antisense antisense MGP_LPJ_T0027426.1 MGP_LPJ_G0017777.1 mouse_genomes_project 10 132738667 132769385 + MGP_LPJ_P0027426 Rnf41 protein_coding protein_coding MGP_LPJ_T0027427.1 MGP_LPJ_G0017777.1 mouse_genomes_project 10 132738667 132769385 + MGP_LPJ_P0027427 Rnf41 protein_coding protein_coding MGP_LPJ_T0026321.1 MGP_LPJ_G0017455.1 mouse_genomes_project 10 82356566 82387111 - MGP_LPJ_P0026321 Atcay protein_coding protein_coding MGP_LPJ_T0026322.1 MGP_LPJ_G0017455.1 mouse_genomes_project 10 82356566 82387063 - MGP_LPJ_P0026322 Atcay protein_coding nonsense_mediated_decay MGP_LPJ_T0026323.1 MGP_LPJ_G0017455.1 mouse_genomes_project 10 82361866 82365331 - Atcay protein_coding retained_intron MGP_LPJ_T0025918.1 MGP_LPJ_G0017342.1 mouse_genomes_project 10 79625748 79631973 - MGP_LPJ_P0025918 Casp14 protein_coding protein_coding MGP_LPJ_T0100077.1 MGP_LPJ_G0038340.1 mouse_genomes_project 10 45642274 45642405 - Gm23481 snoRNA snoRNA MGP_LPJ_T0025020.1 MGP_LPJ_G0017104.1 mouse_genomes_project 10 41500700 41571901 + MGP_LPJ_P0025020 Sec63 protein_coding protein_coding MGP_LPJ_T0025021.1 MGP_LPJ_G0017104.1 mouse_genomes_project 10 41500819 41569759 + Sec63 protein_coding retained_intron MGP_LPJ_T0025022.1 MGP_LPJ_G0017104.1 mouse_genomes_project 10 41501010 41552264 + Sec63 protein_coding retained_intron MGP_LPJ_T0025023.1 MGP_LPJ_G0017104.1 mouse_genomes_project 10 41557436 41568647 + Sec63 protein_coding processed_transcript MGP_LPJ_T0025024.1 MGP_LPJ_G0017104.1 mouse_genomes_project 10 41557436 41568650 + Sec63 protein_coding processed_transcript MGP_LPJ_T0012381.1 MGP_LPJ_G0010472.1 mouse_genomes_project 10 4664633 4665363 - processed_pseudogene processed_pseudogene MGP_LPJ_T0026059.1 MGP_LPJ_G0017389.1 mouse_genomes_project 10 81046662 81065753 + MGP_LPJ_P0026059 Abca7 protein_coding protein_coding MGP_LPJ_T0026060.1 MGP_LPJ_G0017389.1 mouse_genomes_project 10 81047744 81065734 + MGP_LPJ_P0026060 Abca7 protein_coding protein_coding MGP_LPJ_T0026061.1 MGP_LPJ_G0017389.1 mouse_genomes_project 10 81047783 81065749 + MGP_LPJ_P0026061 Abca7 protein_coding protein_coding MGP_LPJ_T0026552.1 MGP_LPJ_G0017506.1 mouse_genomes_project 10 86136330 86242121 + MGP_LPJ_P0026552 Polr3b protein_coding protein_coding MGP_LPJ_T0101750.1 MGP_LPJ_G0039788.1 mouse_genomes_project 10 133678672 133678879 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0025034.1 MGP_LPJ_G0017106.1 mouse_genomes_project 10 41747493 41934669 - MGP_LPJ_P0025034 Sobp protein_coding protein_coding MGP_LPJ_T0025035.1 MGP_LPJ_G0017106.1 mouse_genomes_project 10 41933048 41934660 - MGP_LPJ_P0025035 Sobp protein_coding protein_coding MGP_LPJ_T0025201.1 MGP_LPJ_G0017172.1 mouse_genomes_project 10 59165484 59165820 + MGP_LPJ_P0025201 Gm10322 protein_coding protein_coding MGP_LPJ_T0026171.1 MGP_LPJ_G0017410.1 mouse_genomes_project 10 81409981 81410957 - Adamtsl5 protein_coding processed_transcript MGP_LPJ_T0026172.1 MGP_LPJ_G0017410.1 mouse_genomes_project 10 81410664 81421202 - Adamtsl5 protein_coding retained_intron MGP_LPJ_T0026173.1 MGP_LPJ_G0017410.1 mouse_genomes_project 10 81410692 81418959 - Adamtsl5 protein_coding retained_intron MGP_LPJ_T0026174.1 MGP_LPJ_G0017410.1 mouse_genomes_project 10 81411712 81421202 - Adamtsl5 protein_coding retained_intron MGP_LPJ_T0026175.1 MGP_LPJ_G0017410.1 mouse_genomes_project 10 81411712 81421202 - MGP_LPJ_P0026175 Adamtsl5 protein_coding protein_coding MGP_LPJ_T0026176.1 MGP_LPJ_G0017410.1 mouse_genomes_project 10 81413610 81421202 - MGP_LPJ_P0026176 Adamtsl5 protein_coding protein_coding MGP_LPJ_T0026177.1 MGP_LPJ_G0017410.1 mouse_genomes_project 10 81413877 81418078 - Adamtsl5 protein_coding processed_transcript MGP_LPJ_T0026708.1 MGP_LPJ_G0017551.1 mouse_genomes_project 10 91403206 91454793 - MGP_LPJ_P0026708 Slc17a8 protein_coding protein_coding MGP_LPJ_T0025964.1 MGP_LPJ_G0017364.1 mouse_genomes_project 10 80701193 80709312 + MGP_LPJ_P0025964 Cdc34 protein_coding protein_coding MGP_LPJ_T0025965.1 MGP_LPJ_G0017364.1 mouse_genomes_project 10 80701302 80709312 + MGP_LPJ_P0025965 Cdc34 protein_coding protein_coding MGP_LPJ_T0009629.1 MGP_LPJ_G0007747.1 mouse_genomes_project 10 94092224 94092308 - Mir1251 miRNA miRNA MGP_LPJ_T0009627.1 MGP_LPJ_G0007745.1 mouse_genomes_project 10 88377159 88377292 - Gm25745 miRNA miRNA MGP_LPJ_T0098852.1 MGP_LPJ_G0037115.1 mouse_genomes_project 10 80949658 80949765 + Gm24019 snRNA snRNA MGP_LPJ_T0026581.1 MGP_LPJ_G0017518.1 mouse_genomes_project 10 87546928 87548941 + MGP_LPJ_P0026581 Ascl4 protein_coding protein_coding MGP_LPJ_T0026582.1 MGP_LPJ_G0017518.1 mouse_genomes_project 10 87548021 87567085 + MGP_LPJ_P0026582 Ascl4 protein_coding nonsense_mediated_decay MGP_LPJ_T0025419.1 MGP_LPJ_G0017224.1 mouse_genomes_project 10 63010102 63010552 + MGP_LPJ_P0025419 Atoh7 protein_coding protein_coding MGP_LPJ_T0009597.1 MGP_LPJ_G0007715.1 mouse_genomes_project 10 58496191 58496395 + Gm27672 miRNA miRNA MGP_LPJ_T0026791.1 MGP_LPJ_G0017563.1 mouse_genomes_project 10 95250266 95324415 - MGP_LPJ_P0026791 Elk3 protein_coding protein_coding MGP_LPJ_T0026792.1 MGP_LPJ_G0017563.1 mouse_genomes_project 10 95252150 95324071 - MGP_LPJ_P0026792 Elk3 protein_coding nonsense_mediated_decay MGP_LPJ_T0026793.1 MGP_LPJ_G0017563.1 mouse_genomes_project 10 95252150 95324249 - MGP_LPJ_P0026793 Elk3 protein_coding protein_coding MGP_LPJ_T0026794.1 MGP_LPJ_G0017563.1 mouse_genomes_project 10 95286842 95324415 - Elk3 protein_coding retained_intron MGP_LPJ_T0025220.1 MGP_LPJ_G0017176.1 mouse_genomes_project 10 59560509 59577896 - MGP_LPJ_P0025220 Anapc16 protein_coding protein_coding MGP_LPJ_T0025221.1 MGP_LPJ_G0017176.1 mouse_genomes_project 10 59561008 59577872 - MGP_LPJ_P0025221 Anapc16 protein_coding protein_coding MGP_LPJ_T0025222.1 MGP_LPJ_G0017176.1 mouse_genomes_project 10 59561504 59563484 - Anapc16 protein_coding processed_transcript MGP_LPJ_T0025223.1 MGP_LPJ_G0017176.1 mouse_genomes_project 10 59561523 59577756 - MGP_LPJ_P0025223 Anapc16 protein_coding protein_coding MGP_LPJ_T0025224.1 MGP_LPJ_G0017176.1 mouse_genomes_project 10 59561579 59577847 - MGP_LPJ_P0025224 Anapc16 protein_coding protein_coding MGP_LPJ_T0025225.1 MGP_LPJ_G0017176.1 mouse_genomes_project 10 59561686 59577530 - MGP_LPJ_P0025225 Anapc16 protein_coding protein_coding MGP_LPJ_T0025226.1 MGP_LPJ_G0017176.1 mouse_genomes_project 10 59563466 59564181 - Anapc16 protein_coding retained_intron MGP_LPJ_T0025227.1 MGP_LPJ_G0017176.1 mouse_genomes_project 10 59568859 59571323 - Anapc16 protein_coding retained_intron MGP_LPJ_T0027550.1 MGP_LPJ_G0017848.1 mouse_genomes_project 10 134375051 134376002 - MGP_LPJ_P0027550 protein_coding protein_coding MGP_LPJ_T0101751.1 MGP_LPJ_G0039789.1 mouse_genomes_project 10 133718612 133721065 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0025144.1 MGP_LPJ_G0017152.1 mouse_genomes_project 10 57095156 57217013 + MGP_LPJ_P0025144 Pkib protein_coding protein_coding MGP_LPJ_T0025145.1 MGP_LPJ_G0017152.1 mouse_genomes_project 10 57095226 57219197 + MGP_LPJ_P0025145 Pkib protein_coding protein_coding MGP_LPJ_T0025146.1 MGP_LPJ_G0017152.1 mouse_genomes_project 10 57095231 57186600 + Pkib protein_coding retained_intron MGP_LPJ_T0025147.1 MGP_LPJ_G0017152.1 mouse_genomes_project 10 57095269 57123495 + Pkib protein_coding retained_intron MGP_LPJ_T0025148.1 MGP_LPJ_G0017152.1 mouse_genomes_project 10 57095299 57204481 + MGP_LPJ_P0025148 Pkib protein_coding protein_coding MGP_LPJ_T0025149.1 MGP_LPJ_G0017152.1 mouse_genomes_project 10 57104139 57192801 + Pkib protein_coding processed_transcript MGP_LPJ_T0025150.1 MGP_LPJ_G0017152.1 mouse_genomes_project 10 57109400 57212701 + MGP_LPJ_P0025150 Pkib protein_coding protein_coding MGP_LPJ_T0025151.1 MGP_LPJ_G0017152.1 mouse_genomes_project 10 57109451 57212701 + MGP_LPJ_P0025151 Pkib protein_coding protein_coding MGP_LPJ_T0025152.1 MGP_LPJ_G0017152.1 mouse_genomes_project 10 57118034 57213412 + MGP_LPJ_P0025152 Pkib protein_coding protein_coding MGP_LPJ_T0025153.1 MGP_LPJ_G0017152.1 mouse_genomes_project 10 57118047 57212702 + MGP_LPJ_P0025153 Pkib protein_coding protein_coding MGP_LPJ_T0025154.1 MGP_LPJ_G0017152.1 mouse_genomes_project 10 57204311 57212772 + Pkib protein_coding processed_transcript MGP_LPJ_T0100087.1 MGP_LPJ_G0038350.1 mouse_genomes_project 10 72338932 72339063 + Gm22937 snoRNA snoRNA MGP_LPJ_T0024372.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3770964 4001446 + MGP_LPJ_P0024372 Oprm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024373.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3770964 4055813 + MGP_LPJ_P0024373 Oprm1 protein_coding protein_coding MGP_LPJ_T0024374.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3771051 3839647 + MGP_LPJ_P0024374 Oprm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024375.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3771051 3862498 + MGP_LPJ_P0024375 Oprm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024376.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3771051 3862498 + MGP_LPJ_P0024376 Oprm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024377.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3771051 3863251 + MGP_LPJ_P0024377 Oprm1 protein_coding protein_coding MGP_LPJ_T0024378.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3771051 3862498 + MGP_LPJ_P0024378 Oprm1 protein_coding protein_coding MGP_LPJ_T0024379.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3771051 3862498 + MGP_LPJ_P0024379 Oprm1 protein_coding protein_coding MGP_LPJ_T0024380.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3771051 4056158 + MGP_LPJ_P0024380 Oprm1 protein_coding protein_coding MGP_LPJ_T0024381.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3797473 3862988 + MGP_LPJ_P0024381 Oprm1 protein_coding protein_coding MGP_LPJ_T0024382.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3797566 4055789 + MGP_LPJ_P0024382 Oprm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024383.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3797681 3854139 + MGP_LPJ_P0024383 Oprm1 protein_coding protein_coding MGP_LPJ_T0024384.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3797681 4055813 + MGP_LPJ_P0024384 Oprm1 protein_coding protein_coding MGP_LPJ_T0024385.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3797681 4001506 + MGP_LPJ_P0024385 Oprm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024386.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3797681 3841321 + MGP_LPJ_P0024386 Oprm1 protein_coding protein_coding MGP_LPJ_T0024387.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3797681 4056074 + MGP_LPJ_P0024387 Oprm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024388.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3797681 4001496 + MGP_LPJ_P0024388 Oprm1 protein_coding protein_coding MGP_LPJ_T0024389.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3797681 4056802 + MGP_LPJ_P0024389 Oprm1 protein_coding protein_coding MGP_LPJ_T0024390.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3797681 3851435 + MGP_LPJ_P0024390 Oprm1 protein_coding protein_coding MGP_LPJ_T0024391.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3797681 3844751 + MGP_LPJ_P0024391 Oprm1 protein_coding protein_coding MGP_LPJ_T0024392.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3797681 4055789 + MGP_LPJ_P0024392 Oprm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024393.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3797681 4055810 + MGP_LPJ_P0024393 Oprm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024394.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3797681 3854121 + MGP_LPJ_P0024394 Oprm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024395.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3797681 3854296 + MGP_LPJ_P0024395 Oprm1 protein_coding protein_coding MGP_LPJ_T0024396.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3797681 3852674 + MGP_LPJ_P0024396 Oprm1 protein_coding protein_coding MGP_LPJ_T0024397.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3797681 4056094 + MGP_LPJ_P0024397 Oprm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024398.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3797709 3844557 + MGP_LPJ_P0024398 Oprm1 protein_coding protein_coding MGP_LPJ_T0024399.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3797709 3852709 + MGP_LPJ_P0024399 Oprm1 protein_coding protein_coding MGP_LPJ_T0024400.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3797847 4056094 + Oprm1 protein_coding processed_transcript MGP_LPJ_T0024401.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3797897 3839594 + Oprm1 protein_coding processed_transcript MGP_LPJ_T0024402.1 MGP_LPJ_G0016906.1 mouse_genomes_project 10 3797971 3862627 + Oprm1 protein_coding processed_transcript MGP_LPJ_T0027257.1 MGP_LPJ_G0017725.1 mouse_genomes_project 10 131382616 131422496 - MGP_LPJ_P0027257 Kif5a protein_coding unknown_likely_coding MGP_LPJ_T0025571.1 MGP_LPJ_G0017254.1 mouse_genomes_project 10 71677945 71710054 - MGP_LPJ_P0025571 Ube2d1 protein_coding protein_coding MGP_LPJ_T0025572.1 MGP_LPJ_G0017254.1 mouse_genomes_project 10 71678624 71679929 - Ube2d1 protein_coding retained_intron MGP_LPJ_T0025573.1 MGP_LPJ_G0017254.1 mouse_genomes_project 10 71680745 71710010 - Ube2d1 protein_coding retained_intron MGP_LPJ_T0027205.1 MGP_LPJ_G0017708.1 mouse_genomes_project 10 130985826 131025696 - MGP_LPJ_P0027205 Xrcc6bp1 protein_coding protein_coding MGP_LPJ_T0027206.1 MGP_LPJ_G0017708.1 mouse_genomes_project 10 131009122 131025696 - MGP_LPJ_P0027206 Xrcc6bp1 protein_coding protein_coding MGP_LPJ_T0009595.1 MGP_LPJ_G0007713.1 mouse_genomes_project 10 44763381 44763496 - Gm27410 miRNA miRNA MGP_LPJ_T0026583.1 MGP_LPJ_G0017519.1 mouse_genomes_project 10 87559511 87578405 - MGP_LPJ_P0026583 Rtcb protein_coding protein_coding MGP_LPJ_T0026584.1 MGP_LPJ_G0017519.1 mouse_genomes_project 10 87569736 87576651 - Rtcb protein_coding retained_intron MGP_LPJ_T0026286.1 MGP_LPJ_G0017445.1 mouse_genomes_project 10 82173115 82189252 - MGP_LPJ_P0026286 Sgta protein_coding unknown_likely_coding MGP_LPJ_T0026287.1 MGP_LPJ_G0017445.1 mouse_genomes_project 10 82173121 82189290 - MGP_LPJ_P0026287 Sgta protein_coding protein_coding MGP_LPJ_T0012388.1 MGP_LPJ_G0010479.1 mouse_genomes_project 10 18195560 18199502 + processed_pseudogene processed_pseudogene MGP_LPJ_T0026861.1 MGP_LPJ_G0017582.1 mouse_genomes_project 10 97560944 97590308 - MGP_LPJ_P0026861 Gm9847 protein_coding nonsense_mediated_decay MGP_LPJ_T0026862.1 MGP_LPJ_G0017582.1 mouse_genomes_project 10 97563249 97568522 - Gm9847 protein_coding retained_intron MGP_LPJ_T0026863.1 MGP_LPJ_G0017582.1 mouse_genomes_project 10 97563927 97589968 - Gm9847 protein_coding processed_transcript MGP_LPJ_T0026864.1 MGP_LPJ_G0017582.1 mouse_genomes_project 10 97576840 97590228 - Gm9847 protein_coding processed_transcript MGP_LPJ_T0026865.1 MGP_LPJ_G0017582.1 mouse_genomes_project 10 97587909 97595923 - Gm9847 protein_coding processed_transcript MGP_LPJ_T0026866.1 MGP_LPJ_G0017582.1 mouse_genomes_project 10 97588106 97596379 - MGP_LPJ_P0026866 Gm9847 protein_coding protein_coding MGP_LPJ_T0026868.1 MGP_LPJ_G0017582.1 mouse_genomes_project 10 97592911 97597764 - Gm9847 protein_coding processed_transcript MGP_LPJ_T0026869.1 MGP_LPJ_G0017582.1 mouse_genomes_project 10 97596186 97597095 - Gm9847 protein_coding processed_transcript MGP_LPJ_T0027504.1 MGP_LPJ_G0017816.1 mouse_genomes_project 10 133720070 133721095 + MGP_LPJ_P0027504 Olfr780 protein_coding protein_coding MGP_LPJ_T0024556.1 MGP_LPJ_G0016942.1 mouse_genomes_project 10 11259737 11454018 + MGP_LPJ_P0024556 Hivep2 protein_coding protein_coding MGP_LPJ_T0024557.1 MGP_LPJ_G0016942.1 mouse_genomes_project 10 11260041 11454804 + MGP_LPJ_P0024557 Hivep2 protein_coding protein_coding MGP_LPJ_T0024558.1 MGP_LPJ_G0016942.1 mouse_genomes_project 10 11260041 11454803 + MGP_LPJ_P0024558 Hivep2 protein_coding protein_coding MGP_LPJ_T0024559.1 MGP_LPJ_G0016942.1 mouse_genomes_project 10 11260306 11432201 + MGP_LPJ_P0024559 Hivep2 protein_coding protein_coding MGP_LPJ_T0024560.1 MGP_LPJ_G0016942.1 mouse_genomes_project 10 11260623 11300973 + Hivep2 protein_coding retained_intron MGP_LPJ_T0024561.1 MGP_LPJ_G0016942.1 mouse_genomes_project 10 11260686 11378866 + Hivep2 protein_coding processed_transcript MGP_LPJ_T0026304.1 MGP_LPJ_G0017449.1 mouse_genomes_project 10 82273515 82283507 + MGP_LPJ_P0026304 Zbtb7a protein_coding protein_coding MGP_LPJ_T0026305.1 MGP_LPJ_G0017449.1 mouse_genomes_project 10 82274566 82291244 + MGP_LPJ_P0026305 Zbtb7a protein_coding protein_coding MGP_LPJ_T0026306.1 MGP_LPJ_G0017449.1 mouse_genomes_project 10 82274844 82287454 + MGP_LPJ_P0026306 Zbtb7a protein_coding protein_coding MGP_LPJ_T0026307.1 MGP_LPJ_G0017449.1 mouse_genomes_project 10 82274861 82283118 + MGP_LPJ_P0026307 Zbtb7a protein_coding protein_coding MGP_LPJ_T0026308.1 MGP_LPJ_G0017449.1 mouse_genomes_project 10 82274873 82292017 + MGP_LPJ_P0026308 Zbtb7a protein_coding protein_coding MGP_LPJ_T0026309.1 MGP_LPJ_G0017449.1 mouse_genomes_project 10 82276963 82287469 + MGP_LPJ_P0026309 Zbtb7a protein_coding protein_coding MGP_LPJ_T0000865.1 MGP_LPJ_G0000794.1 mouse_genomes_project 10 114911130 114911428 + TEC TEC MGP_LPJ_T0027516.1 MGP_LPJ_G0017826.1 mouse_genomes_project 10 133929972 133930911 + MGP_LPJ_P0027516 Olfr791 protein_coding protein_coding MGP_LPJ_T0011301.1 MGP_LPJ_G0009419.1 mouse_genomes_project 10 97804901 97805226 + Gm23776 misc_RNA misc_RNA MGP_LPJ_T0026122.1 MGP_LPJ_G0017400.1 mouse_genomes_project 10 81245185 81255760 + MGP_LPJ_P0026122 Efna2 protein_coding protein_coding MGP_LPJ_T0025706.1 MGP_LPJ_G0017278.1 mouse_genomes_project 10 76525413 76528450 - MGP_LPJ_P0025706 Gstt2 protein_coding protein_coding MGP_LPJ_T0003061.1 MGP_LPJ_G0002861.1 mouse_genomes_project 10 63159468 63160549 - 1700120B22Rik antisense antisense MGP_LPJ_T0025986.1 MGP_LPJ_G0017369.1 mouse_genomes_project 10 80779731 80781574 + MGP_LPJ_P0025986 Fgf22 protein_coding protein_coding MGP_LPJ_T0009594.1 MGP_LPJ_G0007712.1 mouse_genomes_project 10 44006019 44006099 - Gm23766 miRNA miRNA MGP_LPJ_T0025839.1 MGP_LPJ_G0017316.1 mouse_genomes_project 10 78521862 78522225 + MGP_LPJ_P0025839 Gm10142 protein_coding protein_coding MGP_LPJ_T0003110.1 MGP_LPJ_G0002898.1 mouse_genomes_project 10 118071153 118088898 + Gm15723 antisense antisense MGP_LPJ_T0003028.1 MGP_LPJ_G0002836.1 mouse_genomes_project 10 4849782 4850875 + B430219N15Rik antisense antisense MGP_LPJ_T0003029.1 MGP_LPJ_G0002836.1 mouse_genomes_project 10 4849853 4850943 + B430219N15Rik antisense antisense MGP_LPJ_T0026268.1 MGP_LPJ_G0017439.1 mouse_genomes_project 10 82022251 82023771 - MGP_LPJ_P0026268 Timm13 protein_coding protein_coding MGP_LPJ_T0025843.1 MGP_LPJ_G0017320.1 mouse_genomes_project 10 78585511 78588069 - MGP_LPJ_P0025843 protein_coding protein_coding MGP_LPJ_T0026264.1 MGP_LPJ_G0017435.1 mouse_genomes_project 10 81954341 81965574 - MGP_LPJ_P0026264 Lingo3 protein_coding protein_coding MGP_LPJ_T0026547.1 MGP_LPJ_G0017504.1 mouse_genomes_project 10 86036304 86043888 - MGP_LPJ_P0026547 Ckap4 protein_coding protein_coding MGP_LPJ_T0026548.1 MGP_LPJ_G0017504.1 mouse_genomes_project 10 86036635 86044036 - MGP_LPJ_P0026548 Ckap4 protein_coding protein_coding MGP_LPJ_T0027438.1 MGP_LPJ_G0017783.1 mouse_genomes_project 10 132883957 132885148 - MGP_LPJ_P0027438 protein_coding protein_coding MGP_LPJ_T0027439.1 MGP_LPJ_G0017783.1 mouse_genomes_project 10 132883957 132884996 - MGP_LPJ_P0027439 protein_coding protein_coding MGP_LPJ_T0027440.1 MGP_LPJ_G0017783.1 mouse_genomes_project 10 132883957 132885005 - MGP_LPJ_P0027440 protein_coding protein_coding MGP_LPJ_T0027441.1 MGP_LPJ_G0017783.1 mouse_genomes_project 10 132883960 132884981 - protein_coding retained_intron MGP_LPJ_T0027442.1 MGP_LPJ_G0017783.1 mouse_genomes_project 10 132883963 132884945 - MGP_LPJ_P0027442 protein_coding protein_coding MGP_LPJ_T0027443.1 MGP_LPJ_G0017783.1 mouse_genomes_project 10 132883964 132885002 - protein_coding retained_intron MGP_LPJ_T0027444.1 MGP_LPJ_G0017783.1 mouse_genomes_project 10 132884318 132884955 - protein_coding retained_intron MGP_LPJ_T0098469.1 MGP_LPJ_G0036749.1 mouse_genomes_project 10 81686945 81688774 - Gm29093 sense_intronic sense_intronic MGP_LPJ_T0026032.1 MGP_LPJ_G0017379.1 mouse_genomes_project 10 80928433 80930237 + MGP_LPJ_P0026032 Cfd protein_coding protein_coding MGP_LPJ_T0027210.1 MGP_LPJ_G0017710.1 mouse_genomes_project 10 131143253 131164300 + MGP_LPJ_P0027210 Avil protein_coding protein_coding MGP_LPJ_T0027211.1 MGP_LPJ_G0017710.1 mouse_genomes_project 10 131143283 131149780 + MGP_LPJ_P0027211 Avil protein_coding protein_coding MGP_LPJ_T0027212.1 MGP_LPJ_G0017710.1 mouse_genomes_project 10 131145545 131149852 + MGP_LPJ_P0027212 Avil protein_coding protein_coding MGP_LPJ_T0027213.1 MGP_LPJ_G0017710.1 mouse_genomes_project 10 131145681 131164084 + MGP_LPJ_P0027213 Avil protein_coding protein_coding MGP_LPJ_T0027463.1 MGP_LPJ_G0017792.1 mouse_genomes_project 10 133082498 133107545 - MGP_LPJ_P0027463 Dgka protein_coding protein_coding MGP_LPJ_T0026267.1 MGP_LPJ_G0017438.1 mouse_genomes_project 10 82002446 82022243 + MGP_LPJ_P0026267 Tmprss9 protein_coding protein_coding MGP_LPJ_T0017077.1 MGP_LPJ_G0015057.1 mouse_genomes_project 10 131447865 131450232 + processed_transcript processed_transcript MGP_LPJ_T0027088.1 MGP_LPJ_G0017671.1 mouse_genomes_project 10 121120273 121126200 + Cpm protein_coding processed_transcript MGP_LPJ_T0027089.1 MGP_LPJ_G0017671.1 mouse_genomes_project 10 121120273 121159884 + Cpm protein_coding retained_intron MGP_LPJ_T0027090.1 MGP_LPJ_G0017671.1 mouse_genomes_project 10 121120273 121180354 + MGP_LPJ_P0027090 Cpm protein_coding protein_coding MGP_LPJ_T0027091.1 MGP_LPJ_G0017671.1 mouse_genomes_project 10 121168931 121177936 + Cpm protein_coding retained_intron MGP_LPJ_T0000871.1 MGP_LPJ_G0000800.1 mouse_genomes_project 10 124463908 124464655 + TEC TEC MGP_LPJ_T0009596.1 MGP_LPJ_G0007714.1 mouse_genomes_project 10 51247409 51247546 + Gm24084 miRNA miRNA MGP_LPJ_T0025293.1 MGP_LPJ_G0017191.1 mouse_genomes_project 10 61053657 61119187 - MGP_LPJ_P0025293 Pald1 protein_coding protein_coding MGP_LPJ_T0027561.1 MGP_LPJ_G0017857.1 mouse_genomes_project 10 134720244 134721302 - MGP_LPJ_P0027561 Olfr827 protein_coding protein_coding MGP_LPJ_T0024448.1 MGP_LPJ_G0016916.1 mouse_genomes_project 10 4862473 4895059 + MGP_LPJ_P0024448 Ppil4 protein_coding protein_coding MGP_LPJ_T0024449.1 MGP_LPJ_G0016916.1 mouse_genomes_project 10 4862490 4877583 + Ppil4 protein_coding retained_intron MGP_LPJ_T0024450.1 MGP_LPJ_G0016916.1 mouse_genomes_project 10 4862503 4884805 + MGP_LPJ_P0024450 Ppil4 protein_coding nonsense_mediated_decay MGP_LPJ_T0024451.1 MGP_LPJ_G0016916.1 mouse_genomes_project 10 4869834 4875613 + Ppil4 protein_coding retained_intron MGP_LPJ_T0025294.1 MGP_LPJ_G0017192.1 mouse_genomes_project 10 61158779 61166489 + MGP_LPJ_P0025294 Nodal protein_coding protein_coding MGP_LPJ_T0098816.1 MGP_LPJ_G0037079.1 mouse_genomes_project 10 1074688 1074845 + Gm25515 snRNA snRNA MGP_LPJ_T0026561.1 MGP_LPJ_G0017510.1 mouse_genomes_project 10 86635775 86651810 + MGP_LPJ_P0026561 Tmem263 protein_coding protein_coding MGP_LPJ_T0024420.1 MGP_LPJ_G0016911.1 mouse_genomes_project 10 4689884 4724869 - MGP_LPJ_P0024420 Pcmt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024421.1 MGP_LPJ_G0016911.1 mouse_genomes_project 10 4689884 4725213 - MGP_LPJ_P0024421 Pcmt1 protein_coding protein_coding MGP_LPJ_T0024422.1 MGP_LPJ_G0016911.1 mouse_genomes_project 10 4689892 4724908 - MGP_LPJ_P0024422 Pcmt1 protein_coding protein_coding MGP_LPJ_T0024423.1 MGP_LPJ_G0016911.1 mouse_genomes_project 10 4696046 4707204 - MGP_LPJ_P0024423 Pcmt1 protein_coding protein_coding MGP_LPJ_T0024424.1 MGP_LPJ_G0016911.1 mouse_genomes_project 10 4696046 4724866 - MGP_LPJ_P0024424 Pcmt1 protein_coding protein_coding MGP_LPJ_T0024425.1 MGP_LPJ_G0016911.1 mouse_genomes_project 10 4697975 4725213 - Pcmt1 protein_coding retained_intron MGP_LPJ_T0024426.1 MGP_LPJ_G0016911.1 mouse_genomes_project 10 4702643 4745676 - MGP_LPJ_P0024426 Pcmt1 protein_coding protein_coding MGP_LPJ_T0024427.1 MGP_LPJ_G0016911.1 mouse_genomes_project 10 4705646 4710921 - MGP_LPJ_P0024427 Pcmt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024428.1 MGP_LPJ_G0016911.1 mouse_genomes_project 10 4705671 4745670 - MGP_LPJ_P0024428 Pcmt1 protein_coding protein_coding MGP_LPJ_T0024429.1 MGP_LPJ_G0016911.1 mouse_genomes_project 10 4707013 4724869 - Pcmt1 protein_coding retained_intron MGP_LPJ_T0026973.1 MGP_LPJ_G0017629.1 mouse_genomes_project 10 112611680 112959749 - MGP_LPJ_P0026973 Nav3 protein_coding protein_coding MGP_LPJ_T0026974.1 MGP_LPJ_G0017629.1 mouse_genomes_project 10 112611680 112773017 - MGP_LPJ_P0026974 Nav3 protein_coding protein_coding MGP_LPJ_T0026975.1 MGP_LPJ_G0017629.1 mouse_genomes_project 10 112644584 112654066 - Nav3 protein_coding processed_transcript MGP_LPJ_T0026976.1 MGP_LPJ_G0017629.1 mouse_genomes_project 10 112693993 112706366 - MGP_LPJ_P0026976 Nav3 protein_coding protein_coding MGP_LPJ_T0026977.1 MGP_LPJ_G0017629.1 mouse_genomes_project 10 112833607 112857696 - Nav3 protein_coding retained_intron MGP_LPJ_T0026978.1 MGP_LPJ_G0017629.1 mouse_genomes_project 10 112852669 113460970 - Nav3 protein_coding retained_intron MGP_LPJ_T0097964.1 MGP_LPJ_G0036245.1 mouse_genomes_project 10 15490494 15490731 + pseudogene pseudogene MGP_LPJ_T0027101.1 MGP_LPJ_G0017673.1 mouse_genomes_project 10 121232082 121245946 - MGP_LPJ_P0027101 Slc35e3 protein_coding protein_coding MGP_LPJ_T0025006.1 MGP_LPJ_G0017100.1 mouse_genomes_project 10 41013918 41179645 - MGP_LPJ_P0025006 Lace1 protein_coding nonsense_mediated_decay MGP_LPJ_T0025007.1 MGP_LPJ_G0017100.1 mouse_genomes_project 10 41014821 41179631 - MGP_LPJ_P0025007 Lace1 protein_coding protein_coding MGP_LPJ_T0025008.1 MGP_LPJ_G0017100.1 mouse_genomes_project 10 41014912 41122661 - MGP_LPJ_P0025008 Lace1 protein_coding nonsense_mediated_decay MGP_LPJ_T0025548.1 MGP_LPJ_G0017248.1 mouse_genomes_project 10 70627249 70670190 + MGP_LPJ_P0025548 Slc16a9 protein_coding protein_coding MGP_LPJ_T0025549.1 MGP_LPJ_G0017248.1 mouse_genomes_project 10 70651208 70668302 + Slc16a9 protein_coding retained_intron MGP_LPJ_T0009641.1 MGP_LPJ_G0007759.1 mouse_genomes_project 10 112233270 112233353 - Gm44495 miRNA miRNA MGP_LPJ_T0100107.1 MGP_LPJ_G0038370.1 mouse_genomes_project 10 120612204 120612281 - Gm26311 snoRNA snoRNA MGP_LPJ_T0024580.1 MGP_LPJ_G0016948.1 mouse_genomes_project 10 15244388 15256052 + Txlnb protein_coding retained_intron MGP_LPJ_T0024581.1 MGP_LPJ_G0016948.1 mouse_genomes_project 10 15244418 15297403 + MGP_LPJ_P0024581 Txlnb protein_coding protein_coding MGP_LPJ_T0025836.1 MGP_LPJ_G0017313.1 mouse_genomes_project 10 78493017 78494127 - MGP_LPJ_P0025836 Gm19402 protein_coding protein_coding MGP_LPJ_T0026384.1 MGP_LPJ_G0017469.1 mouse_genomes_project 10 82545638 82549563 + MGP_LPJ_P0026384 Dohh protein_coding protein_coding MGP_LPJ_T0026385.1 MGP_LPJ_G0017469.1 mouse_genomes_project 10 82545669 82548662 + MGP_LPJ_P0026385 Dohh protein_coding protein_coding MGP_LPJ_T0026386.1 MGP_LPJ_G0017469.1 mouse_genomes_project 10 82545676 82552771 + MGP_LPJ_P0026386 Dohh protein_coding nonsense_mediated_decay MGP_LPJ_T0026387.1 MGP_LPJ_G0017469.1 mouse_genomes_project 10 82545677 82547312 + Dohh protein_coding retained_intron MGP_LPJ_T0026388.1 MGP_LPJ_G0017469.1 mouse_genomes_project 10 82546105 82547205 + MGP_LPJ_P0026388 Dohh protein_coding protein_coding MGP_LPJ_T0026389.1 MGP_LPJ_G0017469.1 mouse_genomes_project 10 82546831 82548892 + MGP_LPJ_P0026389 Dohh protein_coding protein_coding MGP_LPJ_T0026390.1 MGP_LPJ_G0017469.1 mouse_genomes_project 10 82548527 82552069 + MGP_LPJ_P0026390 Dohh protein_coding protein_coding MGP_LPJ_T0026391.1 MGP_LPJ_G0017469.1 mouse_genomes_project 10 82550215 82552478 + Dohh protein_coding processed_transcript MGP_LPJ_T0026392.1 MGP_LPJ_G0017469.1 mouse_genomes_project 10 82551539 82552346 + Dohh protein_coding retained_intron MGP_LPJ_T0100104.1 MGP_LPJ_G0038367.1 mouse_genomes_project 10 113890923 113891045 - Gm22186 snoRNA snoRNA MGP_LPJ_T0025652.1 MGP_LPJ_G0017266.1 mouse_genomes_project 10 76052175 76089557 + MGP_LPJ_P0025652 Upb1 protein_coding protein_coding MGP_LPJ_T0025653.1 MGP_LPJ_G0017266.1 mouse_genomes_project 10 76052222 76072943 + Upb1 protein_coding retained_intron MGP_LPJ_T0025654.1 MGP_LPJ_G0017266.1 mouse_genomes_project 10 76058435 76075719 + Upb1 protein_coding retained_intron MGP_LPJ_T0025656.1 MGP_LPJ_G0017266.1 mouse_genomes_project 10 76076122 76078261 + Upb1 protein_coding retained_intron MGP_LPJ_T0026416.1 MGP_LPJ_G0017475.1 mouse_genomes_project 10 82675534 82681454 - Gna15 protein_coding retained_intron MGP_LPJ_T0026417.1 MGP_LPJ_G0017475.1 mouse_genomes_project 10 82675541 82701776 - MGP_LPJ_P0026417 Gna15 protein_coding protein_coding MGP_LPJ_T0026418.1 MGP_LPJ_G0017475.1 mouse_genomes_project 10 82676315 82687013 - Gna15 protein_coding retained_intron MGP_LPJ_T0098843.1 MGP_LPJ_G0037106.1 mouse_genomes_project 10 53997632 53997694 - Gm25602 snRNA snRNA MGP_LPJ_T0026826.1 MGP_LPJ_G0017573.1 mouse_genomes_project 10 95997839 96032442 - MGP_LPJ_P0026826 Vezt protein_coding protein_coding MGP_LPJ_T0026827.1 MGP_LPJ_G0017573.1 mouse_genomes_project 10 96019489 96097600 - MGP_LPJ_P0026827 Vezt protein_coding protein_coding MGP_LPJ_T0026828.1 MGP_LPJ_G0017573.1 mouse_genomes_project 10 96026072 96097531 - MGP_LPJ_P0026828 Vezt protein_coding protein_coding MGP_LPJ_T0026829.1 MGP_LPJ_G0017573.1 mouse_genomes_project 10 96029246 96097488 - MGP_LPJ_P0026829 Vezt protein_coding protein_coding MGP_LPJ_T0026830.1 MGP_LPJ_G0017573.1 mouse_genomes_project 10 96029703 96097525 - MGP_LPJ_P0026830 Vezt protein_coding protein_coding MGP_LPJ_T0026831.1 MGP_LPJ_G0017573.1 mouse_genomes_project 10 96044652 96056973 - MGP_LPJ_P0026831 Vezt protein_coding nonsense_mediated_decay MGP_LPJ_T0026832.1 MGP_LPJ_G0017573.1 mouse_genomes_project 10 96047354 96097560 - MGP_LPJ_P0026832 Vezt protein_coding nonsense_mediated_decay MGP_LPJ_T0026833.1 MGP_LPJ_G0017573.1 mouse_genomes_project 10 96053513 96097584 - MGP_LPJ_P0026833 Vezt protein_coding protein_coding MGP_LPJ_T0026834.1 MGP_LPJ_G0017573.1 mouse_genomes_project 10 96056909 96081621 - MGP_LPJ_P0026834 Vezt protein_coding protein_coding MGP_LPJ_T0026835.1 MGP_LPJ_G0017573.1 mouse_genomes_project 10 96062859 96097532 - Vezt protein_coding retained_intron MGP_LPJ_T0026836.1 MGP_LPJ_G0017573.1 mouse_genomes_project 10 96065026 96097450 - Vezt protein_coding processed_transcript MGP_LPJ_T0025913.1 MGP_LPJ_G0017339.1 mouse_genomes_project 10 79481761 79491509 + MGP_LPJ_P0025913 Ilvbl protein_coding unknown_likely_coding MGP_LPJ_T0027001.1 MGP_LPJ_G0017638.1 mouse_genomes_project 10 115087710 115099650 - MGP_LPJ_P0027001 Glipr1 protein_coding protein_coding MGP_LPJ_T0027002.1 MGP_LPJ_G0017638.1 mouse_genomes_project 10 115087717 115106501 - MGP_LPJ_P0027002 Glipr1 protein_coding protein_coding MGP_LPJ_T0027003.1 MGP_LPJ_G0017638.1 mouse_genomes_project 10 115087722 115095878 - MGP_LPJ_P0027003 Glipr1 protein_coding protein_coding MGP_LPJ_T0027004.1 MGP_LPJ_G0017638.1 mouse_genomes_project 10 115095850 115106511 - Glipr1 protein_coding processed_transcript MGP_LPJ_T0027005.1 MGP_LPJ_G0017638.1 mouse_genomes_project 10 115095950 115098205 - Glipr1 protein_coding processed_transcript MGP_LPJ_T0027488.1 MGP_LPJ_G0017804.1 mouse_genomes_project 10 133337013 133341005 - MGP_LPJ_P0027488 Mettl7b protein_coding protein_coding MGP_LPJ_T0026342.1 MGP_LPJ_G0017458.1 mouse_genomes_project 10 82422624 82424846 - MGP_LPJ_P0026342 Mrpl54 protein_coding protein_coding MGP_LPJ_T0026343.1 MGP_LPJ_G0017458.1 mouse_genomes_project 10 82423341 82424836 - Mrpl54 protein_coding retained_intron MGP_LPJ_T0100096.1 MGP_LPJ_G0038359.1 mouse_genomes_project 10 100089170 100089298 - Gm25658 snoRNA snoRNA MGP_LPJ_T0025402.1 MGP_LPJ_G0017221.1 mouse_genomes_project 10 62838008 62848077 + Rufy2 protein_coding retained_intron MGP_LPJ_T0025403.1 MGP_LPJ_G0017221.1 mouse_genomes_project 10 62838024 62863317 + MGP_LPJ_P0025403 Rufy2 protein_coding protein_coding MGP_LPJ_T0025404.1 MGP_LPJ_G0017221.1 mouse_genomes_project 10 62838027 62875501 + MGP_LPJ_P0025404 Rufy2 protein_coding protein_coding MGP_LPJ_T0025405.1 MGP_LPJ_G0017221.1 mouse_genomes_project 10 62838037 62878756 + MGP_LPJ_P0025405 Rufy2 protein_coding nonsense_mediated_decay MGP_LPJ_T0025406.1 MGP_LPJ_G0017221.1 mouse_genomes_project 10 62838047 62863290 + MGP_LPJ_P0025406 Rufy2 protein_coding protein_coding MGP_LPJ_T0025407.1 MGP_LPJ_G0017221.1 mouse_genomes_project 10 62838078 62861070 + MGP_LPJ_P0025407 Rufy2 protein_coding nonsense_mediated_decay MGP_LPJ_T0025408.1 MGP_LPJ_G0017221.1 mouse_genomes_project 10 62839213 62846954 + MGP_LPJ_P0025408 Rufy2 protein_coding protein_coding MGP_LPJ_T0025409.1 MGP_LPJ_G0017221.1 mouse_genomes_project 10 62861107 62868351 + Rufy2 protein_coding retained_intron MGP_LPJ_T0026560.1 MGP_LPJ_G0017509.1 mouse_genomes_project 10 86630167 86635644 - MGP_LPJ_P0026560 Fhl4 protein_coding protein_coding MGP_LPJ_T0100088.1 MGP_LPJ_G0038351.1 mouse_genomes_project 10 73032420 73032553 + Gm24984 snoRNA snoRNA MGP_LPJ_T0027513.1 MGP_LPJ_G0017823.1 mouse_genomes_project 10 133884673 133885612 + MGP_LPJ_P0027513 Olfr789 protein_coding protein_coding MGP_LPJ_T0011284.1 MGP_LPJ_G0009402.1 mouse_genomes_project 10 39473423 39473666 - Gm22948 misc_RNA misc_RNA MGP_LPJ_T0098101.1 MGP_LPJ_G0036382.1 mouse_genomes_project 10 891016 891125 - Gm23023 rRNA rRNA MGP_LPJ_T0017076.1 MGP_LPJ_G0015056.1 mouse_genomes_project 10 124603230 124608928 + Gm15910 processed_transcript processed_transcript MGP_LPJ_T0025420.1 MGP_LPJ_G0017225.1 mouse_genomes_project 10 63022760 63117200 - MGP_LPJ_P0025420 Mypn protein_coding protein_coding MGP_LPJ_T0025421.1 MGP_LPJ_G0017225.1 mouse_genomes_project 10 63023822 63113156 - MGP_LPJ_P0025421 Mypn protein_coding unknown_likely_coding MGP_LPJ_T0026123.1 MGP_LPJ_G0017401.1 mouse_genomes_project 10 81296373 81313888 + MGP_LPJ_P0026123 Mum1 protein_coding protein_coding MGP_LPJ_T0026124.1 MGP_LPJ_G0017401.1 mouse_genomes_project 10 81296594 81313885 + Mum1 protein_coding retained_intron MGP_LPJ_T0026125.1 MGP_LPJ_G0017401.1 mouse_genomes_project 10 81296611 81302620 + MGP_LPJ_P0026125 Mum1 protein_coding protein_coding MGP_LPJ_T0026126.1 MGP_LPJ_G0017401.1 mouse_genomes_project 10 81296619 81313883 + Mum1 protein_coding retained_intron MGP_LPJ_T0026127.1 MGP_LPJ_G0017401.1 mouse_genomes_project 10 81296690 81299111 + Mum1 protein_coding retained_intron MGP_LPJ_T0026128.1 MGP_LPJ_G0017401.1 mouse_genomes_project 10 81304133 81313888 + Mum1 protein_coding retained_intron MGP_LPJ_T0026129.1 MGP_LPJ_G0017401.1 mouse_genomes_project 10 81304134 81307054 + Mum1 protein_coding retained_intron MGP_LPJ_T0026130.1 MGP_LPJ_G0017401.1 mouse_genomes_project 10 81304199 81313886 + Mum1 protein_coding retained_intron MGP_LPJ_T0026131.1 MGP_LPJ_G0017401.1 mouse_genomes_project 10 81306050 81310332 + Mum1 protein_coding retained_intron MGP_LPJ_T0026132.1 MGP_LPJ_G0017401.1 mouse_genomes_project 10 81311477 81313885 + Mum1 protein_coding retained_intron MGP_LPJ_T0026133.1 MGP_LPJ_G0017401.1 mouse_genomes_project 10 81312596 81313885 + Mum1 protein_coding processed_transcript MGP_LPJ_T0024725.1 MGP_LPJ_G0017006.1 mouse_genomes_project 10 22108334 22150346 + MGP_LPJ_P0024725 Stx7 protein_coding unknown_likely_coding MGP_LPJ_T0026479.1 MGP_LPJ_G0017485.1 mouse_genomes_project 10 83377617 83378281 - Zfp433 protein_coding processed_transcript MGP_LPJ_T0026480.1 MGP_LPJ_G0017485.1 mouse_genomes_project 10 83377787 83395987 - MGP_LPJ_P0026480 Zfp433 protein_coding protein_coding MGP_LPJ_T0027493.1 MGP_LPJ_G0017809.1 mouse_genomes_project 10 133516913 133517997 - MGP_LPJ_P0027493 Olfr769 protein_coding protein_coding MGP_LPJ_T0100071.1 MGP_LPJ_G0038334.1 mouse_genomes_project 10 36658275 36658343 + Gm24297 snoRNA snoRNA MGP_LPJ_T0006166.1 MGP_LPJ_G0005150.1 mouse_genomes_project 10 97598470 97609672 + 5730420D15Rik lincRNA lincRNA MGP_LPJ_T0009592.1 MGP_LPJ_G0007710.1 mouse_genomes_project 10 43240635 43240728 + Mir1929 miRNA miRNA MGP_LPJ_T0025972.1 MGP_LPJ_G0017367.1 mouse_genomes_project 10 80738234 80758620 + MGP_LPJ_P0025972 Hcn2 protein_coding protein_coding MGP_LPJ_T0006107.1 MGP_LPJ_G0005111.1 mouse_genomes_project 10 22412958 22418123 + Gm15271 lincRNA lincRNA MGP_LPJ_T0100082.1 MGP_LPJ_G0038345.1 mouse_genomes_project 10 59374057 59374189 - Gm23803 snoRNA snoRNA MGP_LPJ_T0024362.1 MGP_LPJ_G0016902.1 mouse_genomes_project 10 2815501 2822056 - MGP_LPJ_P0024362 Fbxo5 protein_coding protein_coding MGP_LPJ_T0024363.1 MGP_LPJ_G0016902.1 mouse_genomes_project 10 2818541 2821066 - Fbxo5 protein_coding processed_transcript MGP_LPJ_T0101246.1 MGP_LPJ_G0039493.1 mouse_genomes_project 10 118554012 118555230 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0027339.1 MGP_LPJ_G0017749.1 mouse_genomes_project 10 132007101 132075030 + MGP_LPJ_P0027339 Rdh16 protein_coding nonsense_mediated_decay MGP_LPJ_T0027340.1 MGP_LPJ_G0017749.1 mouse_genomes_project 10 132007102 132112871 + MGP_LPJ_P0027340 Rdh16 protein_coding nonsense_mediated_decay MGP_LPJ_T0027341.1 MGP_LPJ_G0017749.1 mouse_genomes_project 10 132007103 132075703 + MGP_LPJ_P0027341 Rdh16 protein_coding protein_coding MGP_LPJ_T0011285.1 MGP_LPJ_G0009403.1 mouse_genomes_project 10 41011088 41011333 + Gm23533 misc_RNA misc_RNA MGP_LPJ_T0027278.1 MGP_LPJ_G0017733.1 mouse_genomes_project 10 131527452 131544536 - MGP_LPJ_P0027278 Inhbc protein_coding protein_coding MGP_LPJ_T0003093.1 MGP_LPJ_G0002886.1 mouse_genomes_project 10 87720015 87736269 + 4930486F22Rik antisense antisense MGP_LPJ_T0026194.1 MGP_LPJ_G0017415.1 mouse_genomes_project 10 81490043 81514180 - MGP_LPJ_P0026194 Tcf3 protein_coding protein_coding MGP_LPJ_T0026195.1 MGP_LPJ_G0017415.1 mouse_genomes_project 10 81490043 81514190 - MGP_LPJ_P0026195 Tcf3 protein_coding protein_coding MGP_LPJ_T0026196.1 MGP_LPJ_G0017415.1 mouse_genomes_project 10 81490076 81514186 - MGP_LPJ_P0026196 Tcf3 protein_coding protein_coding MGP_LPJ_T0026197.1 MGP_LPJ_G0017415.1 mouse_genomes_project 10 81490076 81514190 - MGP_LPJ_P0026197 Tcf3 protein_coding protein_coding MGP_LPJ_T0026198.1 MGP_LPJ_G0017415.1 mouse_genomes_project 10 81490137 81514164 - MGP_LPJ_P0026198 Tcf3 protein_coding protein_coding MGP_LPJ_T0026199.1 MGP_LPJ_G0017415.1 mouse_genomes_project 10 81490137 81514164 - MGP_LPJ_P0026199 Tcf3 protein_coding protein_coding MGP_LPJ_T0026200.1 MGP_LPJ_G0017415.1 mouse_genomes_project 10 81490149 81511536 - MGP_LPJ_P0026200 Tcf3 protein_coding protein_coding MGP_LPJ_T0026201.1 MGP_LPJ_G0017415.1 mouse_genomes_project 10 81490155 81514178 - MGP_LPJ_P0026201 Tcf3 protein_coding protein_coding MGP_LPJ_T0026202.1 MGP_LPJ_G0017415.1 mouse_genomes_project 10 81490155 81514178 - MGP_LPJ_P0026202 Tcf3 protein_coding protein_coding MGP_LPJ_T0026203.1 MGP_LPJ_G0017415.1 mouse_genomes_project 10 81490583 81511509 - MGP_LPJ_P0026203 Tcf3 protein_coding protein_coding MGP_LPJ_T0026204.1 MGP_LPJ_G0017415.1 mouse_genomes_project 10 81490583 81511606 - MGP_LPJ_P0026204 Tcf3 protein_coding protein_coding MGP_LPJ_T0026205.1 MGP_LPJ_G0017415.1 mouse_genomes_project 10 81493156 81496017 - Tcf3 protein_coding processed_transcript MGP_LPJ_T0026206.1 MGP_LPJ_G0017415.1 mouse_genomes_project 10 81495772 81496818 - Tcf3 protein_coding retained_intron MGP_LPJ_T0026207.1 MGP_LPJ_G0017415.1 mouse_genomes_project 10 81500612 81502390 - MGP_LPJ_P0026207 Tcf3 protein_coding protein_coding MGP_LPJ_T0012403.1 MGP_LPJ_G0010494.1 mouse_genomes_project 10 41133003 41133180 + processed_pseudogene processed_pseudogene MGP_LPJ_T0027556.1 MGP_LPJ_G0017853.1 mouse_genomes_project 10 134534086 134538093 + MGP_LPJ_P0027556 Olfr821 protein_coding protein_coding MGP_LPJ_T0027557.1 MGP_LPJ_G0017853.1 mouse_genomes_project 10 134537160 134538093 + MGP_LPJ_P0027557 Olfr821 protein_coding protein_coding MGP_LPJ_T0100094.1 MGP_LPJ_G0038357.1 mouse_genomes_project 10 95972386 95972554 - Gm25962 snoRNA snoRNA MGP_LPJ_T0009640.1 MGP_LPJ_G0007758.1 mouse_genomes_project 10 111302252 111302346 + Gm25591 miRNA miRNA MGP_LPJ_T0006118.1 MGP_LPJ_G0005122.1 mouse_genomes_project 10 60742859 60751168 - Gm20610 lincRNA lincRNA MGP_LPJ_T0027204.1 MGP_LPJ_G0017707.1 mouse_genomes_project 10 130020745 130079823 + MGP_LPJ_P0027204 Lrig3 protein_coding protein_coding MGP_LPJ_T0100079.1 MGP_LPJ_G0038342.1 mouse_genomes_project 10 51101988 51102116 + Gm23906 snoRNA snoRNA MGP_LPJ_T0012387.1 MGP_LPJ_G0010478.1 mouse_genomes_project 10 18075943 18077531 - processed_pseudogene processed_pseudogene MGP_LPJ_T0025686.1 MGP_LPJ_G0017270.1 mouse_genomes_project 10 76268763 76296802 + MGP_LPJ_P0025686 Ggt5 protein_coding protein_coding MGP_LPJ_T0025687.1 MGP_LPJ_G0017270.1 mouse_genomes_project 10 76268804 76285273 + MGP_LPJ_P0025687 Ggt5 protein_coding protein_coding MGP_LPJ_T0025688.1 MGP_LPJ_G0017270.1 mouse_genomes_project 10 76269215 76285275 + MGP_LPJ_P0025688 Ggt5 protein_coding protein_coding MGP_LPJ_T0025689.1 MGP_LPJ_G0017270.1 mouse_genomes_project 10 76283952 76289369 + Ggt5 protein_coding processed_transcript MGP_LPJ_T0024625.1 MGP_LPJ_G0016962.1 mouse_genomes_project 10 17153035 17165691 + MGP_LPJ_P0024625 Il22ra2 protein_coding protein_coding MGP_LPJ_T0098864.1 MGP_LPJ_G0037127.1 mouse_genomes_project 10 94463781 94463843 + Gm25884 snRNA snRNA MGP_LPJ_T0009650.1 MGP_LPJ_G0007768.1 mouse_genomes_project 10 130810992 130811102 - Mir378d miRNA miRNA MGP_LPJ_T0006140.1 MGP_LPJ_G0005138.1 mouse_genomes_project 10 85997772 86006915 + 4930463O16Rik lincRNA lincRNA MGP_LPJ_T0006141.1 MGP_LPJ_G0005138.1 mouse_genomes_project 10 85998213 86002206 + 4930463O16Rik lincRNA lincRNA MGP_LPJ_T0026962.1 MGP_LPJ_G0017624.1 mouse_genomes_project 10 110334740 110541360 - MGP_LPJ_P0026962 Ptprq protein_coding protein_coding MGP_LPJ_T0012441.1 MGP_LPJ_G0010532.1 mouse_genomes_project 10 126015276 126016267 + processed_pseudogene processed_pseudogene MGP_LPJ_T0025747.1 MGP_LPJ_G0017293.1 mouse_genomes_project 10 77187222 77197310 + MGP_LPJ_P0025747 2610028H24Rik protein_coding protein_coding MGP_LPJ_T0026419.1 MGP_LPJ_G0017476.1 mouse_genomes_project 10 82707092 82723541 - MGP_LPJ_P0026419 Gna11 protein_coding protein_coding MGP_LPJ_T0026420.1 MGP_LPJ_G0017476.1 mouse_genomes_project 10 82708655 82710383 - Gna11 protein_coding retained_intron MGP_LPJ_T0026421.1 MGP_LPJ_G0017476.1 mouse_genomes_project 10 82711521 82713522 - Gna11 protein_coding retained_intron MGP_LPJ_T0100069.1 MGP_LPJ_G0038332.1 mouse_genomes_project 10 35172343 35172490 - Gm22554 snoRNA snoRNA MGP_LPJ_T0026052.1 MGP_LPJ_G0017387.1 mouse_genomes_project 10 81023272 81027098 - Tmem259 protein_coding retained_intron MGP_LPJ_T0026053.1 MGP_LPJ_G0017387.1 mouse_genomes_project 10 81024214 81027265 - Tmem259 protein_coding retained_intron MGP_LPJ_T0026054.1 MGP_LPJ_G0017387.1 mouse_genomes_project 10 81025442 81032437 - MGP_LPJ_P0026054 Tmem259 protein_coding protein_coding MGP_LPJ_T0026055.1 MGP_LPJ_G0017387.1 mouse_genomes_project 10 81025682 81032288 - MGP_LPJ_P0026055 Tmem259 protein_coding protein_coding MGP_LPJ_T0026056.1 MGP_LPJ_G0017387.1 mouse_genomes_project 10 81026287 81027101 - Tmem259 protein_coding retained_intron MGP_LPJ_T0009646.1 MGP_LPJ_G0007764.1 mouse_genomes_project 10 126537768 126537869 + Mir8104 miRNA miRNA MGP_LPJ_T0012445.1 MGP_LPJ_G0010536.1 mouse_genomes_project 10 134652656 134660916 + processed_pseudogene processed_pseudogene MGP_LPJ_T0026950.1 MGP_LPJ_G0017618.1 mouse_genomes_project 10 108581996 108588762 + Ccdc59 protein_coding retained_intron MGP_LPJ_T0026951.1 MGP_LPJ_G0017618.1 mouse_genomes_project 10 108581996 108588762 + MGP_LPJ_P0026951 Ccdc59 protein_coding protein_coding MGP_LPJ_T0026952.1 MGP_LPJ_G0017618.1 mouse_genomes_project 10 108582433 108583912 + Ccdc59 protein_coding retained_intron MGP_LPJ_T0024618.1 MGP_LPJ_G0016960.1 mouse_genomes_project 10 16884790 16886849 + MGP_LPJ_P0024618 Olig3 protein_coding protein_coding MGP_LPJ_T0027372.1 MGP_LPJ_G0017760.1 mouse_genomes_project 10 132384366 132422962 + MGP_LPJ_P0027372 Baz2a protein_coding protein_coding MGP_LPJ_T0027373.1 MGP_LPJ_G0017760.1 mouse_genomes_project 10 132384366 132422962 + MGP_LPJ_P0027373 Baz2a protein_coding protein_coding MGP_LPJ_T0025396.1 MGP_LPJ_G0017220.1 mouse_genomes_project 10 62801019 62831966 + MGP_LPJ_P0025396 Dna2 protein_coding protein_coding MGP_LPJ_T0025397.1 MGP_LPJ_G0017220.1 mouse_genomes_project 10 62801068 62831548 + MGP_LPJ_P0025397 Dna2 protein_coding nonsense_mediated_decay MGP_LPJ_T0025398.1 MGP_LPJ_G0017220.1 mouse_genomes_project 10 62801073 62804783 + Dna2 protein_coding retained_intron MGP_LPJ_T0025399.1 MGP_LPJ_G0017220.1 mouse_genomes_project 10 62801103 62822794 + Dna2 protein_coding retained_intron MGP_LPJ_T0025400.1 MGP_LPJ_G0017220.1 mouse_genomes_project 10 62822348 62831965 + Dna2 protein_coding retained_intron MGP_LPJ_T0025401.1 MGP_LPJ_G0017220.1 mouse_genomes_project 10 62822643 62831960 + Dna2 protein_coding retained_intron MGP_LPJ_T0012422.1 MGP_LPJ_G0010513.1 mouse_genomes_project 10 75482086 75482518 - processed_pseudogene processed_pseudogene MGP_LPJ_T0026796.1 MGP_LPJ_G0017565.1 mouse_genomes_project 10 95531796 95563778 + MGP_LPJ_P0026796 Hal protein_coding protein_coding MGP_LPJ_T0026797.1 MGP_LPJ_G0017565.1 mouse_genomes_project 10 95531831 95560970 + MGP_LPJ_P0026797 Hal protein_coding nonsense_mediated_decay MGP_LPJ_T0026798.1 MGP_LPJ_G0017565.1 mouse_genomes_project 10 95540457 95544632 + Hal protein_coding retained_intron MGP_LPJ_T0026799.1 MGP_LPJ_G0017565.1 mouse_genomes_project 10 95545099 95561204 + Hal protein_coding processed_transcript MGP_LPJ_T0012440.1 MGP_LPJ_G0010531.1 mouse_genomes_project 10 124681516 124682303 + processed_pseudogene processed_pseudogene MGP_LPJ_T0026297.1 MGP_LPJ_G0017448.1 mouse_genomes_project 10 82240322 82261401 + MGP_LPJ_P0026297 Map2k2 protein_coding protein_coding MGP_LPJ_T0026298.1 MGP_LPJ_G0017448.1 mouse_genomes_project 10 82240354 82260587 + MGP_LPJ_P0026298 Map2k2 protein_coding protein_coding MGP_LPJ_T0026299.1 MGP_LPJ_G0017448.1 mouse_genomes_project 10 82240379 82260549 + MGP_LPJ_P0026299 Map2k2 protein_coding nonsense_mediated_decay MGP_LPJ_T0026300.1 MGP_LPJ_G0017448.1 mouse_genomes_project 10 82240752 82255829 + MGP_LPJ_P0026300 Map2k2 protein_coding protein_coding MGP_LPJ_T0026301.1 MGP_LPJ_G0017448.1 mouse_genomes_project 10 82255315 82256031 + Map2k2 protein_coding retained_intron MGP_LPJ_T0026302.1 MGP_LPJ_G0017448.1 mouse_genomes_project 10 82257557 82259266 + Map2k2 protein_coding retained_intron MGP_LPJ_T0026303.1 MGP_LPJ_G0017448.1 mouse_genomes_project 10 82258863 82260631 + Map2k2 protein_coding retained_intron MGP_LPJ_T0003127.1 MGP_LPJ_G0002910.1 mouse_genomes_project 10 131872077 131877241 - Gm16230 antisense antisense MGP_LPJ_T0027015.1 MGP_LPJ_G0017645.1 mouse_genomes_project 10 117651150 118070851 - MGP_LPJ_P0027015 Trhde protein_coding protein_coding MGP_LPJ_T0027016.1 MGP_LPJ_G0017645.1 mouse_genomes_project 10 117828821 118071735 - Trhde protein_coding retained_intron MGP_LPJ_T0027017.1 MGP_LPJ_G0017645.1 mouse_genomes_project 10 118055879 118070798 - Trhde protein_coding retained_intron MGP_LPJ_T0024917.1 MGP_LPJ_G0017074.1 mouse_genomes_project 10 38512768 38536454 - MGP_LPJ_P0024917 Mfsd4b1 protein_coding protein_coding MGP_LPJ_T0024918.1 MGP_LPJ_G0017074.1 mouse_genomes_project 10 38518252 38536345 - Mfsd4b1 protein_coding processed_transcript MGP_LPJ_T0025663.1 MGP_LPJ_G0017267.1 mouse_genomes_project 10 76181023 76203235 + MGP_LPJ_P0025663 Snrpd3 protein_coding protein_coding MGP_LPJ_T0025664.1 MGP_LPJ_G0017267.1 mouse_genomes_project 10 76181486 76183339 + Snrpd3 protein_coding retained_intron MGP_LPJ_T0009587.1 MGP_LPJ_G0007705.1 mouse_genomes_project 10 20601837 20601898 - Mir7663 miRNA miRNA MGP_LPJ_T0024838.1 MGP_LPJ_G0017046.1 mouse_genomes_project 10 32242507 32267366 - MGP_LPJ_P0024838 Zufsp protein_coding protein_coding MGP_LPJ_T0027448.1 MGP_LPJ_G0017785.1 mouse_genomes_project 10 132907978 132931362 - MGP_LPJ_P0027448 Erbb3 protein_coding protein_coding MGP_LPJ_T0024575.1 MGP_LPJ_G0016946.1 mouse_genomes_project 10 12048426 12051018 - MGP_LPJ_P0024575 Gje1 protein_coding protein_coding MGP_LPJ_T0009614.1 MGP_LPJ_G0007732.1 mouse_genomes_project 10 80536656 80536718 - Mir6909 miRNA miRNA MGP_LPJ_T0027358.1 MGP_LPJ_G0017757.1 mouse_genomes_project 10 132323723 132336969 + MGP_LPJ_P0027358 Naca protein_coding protein_coding MGP_LPJ_T0027359.1 MGP_LPJ_G0017757.1 mouse_genomes_project 10 132323723 132336969 + MGP_LPJ_P0027359 Naca protein_coding protein_coding MGP_LPJ_T0024716.1 MGP_LPJ_G0016997.1 mouse_genomes_project 10 21916083 21917115 - MGP_LPJ_P0024716 Taar7a protein_coding protein_coding MGP_LPJ_T0027563.1 MGP_LPJ_G0017859.1 mouse_genomes_project 10 134836331 134881485 + MGP_LPJ_P0027563 Tespa1 protein_coding protein_coding MGP_LPJ_T0098865.1 MGP_LPJ_G0037128.1 mouse_genomes_project 10 96258196 96258278 - Gm26122 snRNA snRNA MGP_LPJ_T0012437.1 MGP_LPJ_G0010528.1 mouse_genomes_project 10 120904706 120905205 + processed_pseudogene processed_pseudogene MGP_LPJ_T0026801.1 MGP_LPJ_G0017567.1 mouse_genomes_project 10 95586772 95629494 + MGP_LPJ_P0026801 Ccdc38 protein_coding protein_coding MGP_LPJ_T0026802.1 MGP_LPJ_G0017567.1 mouse_genomes_project 10 95596056 95601331 + Ccdc38 protein_coding retained_intron MGP_LPJ_T0026803.1 MGP_LPJ_G0017567.1 mouse_genomes_project 10 95600602 95601376 + Ccdc38 protein_coding retained_intron MGP_LPJ_T0026804.1 MGP_LPJ_G0017567.1 mouse_genomes_project 10 95600605 95628321 + Ccdc38 protein_coding processed_transcript MGP_LPJ_T0026805.1 MGP_LPJ_G0017567.1 mouse_genomes_project 10 95610194 95619342 + Ccdc38 protein_coding processed_transcript MGP_LPJ_T0027018.1 MGP_LPJ_G0017646.1 mouse_genomes_project 10 118349498 118464661 - MGP_LPJ_P0027018 Tph2 protein_coding protein_coding MGP_LPJ_T0027019.1 MGP_LPJ_G0017646.1 mouse_genomes_project 10 118451355 118454253 - Tph2 protein_coding processed_transcript MGP_LPJ_T0026593.1 MGP_LPJ_G0017522.1 mouse_genomes_project 10 87679988 88134214 - MGP_LPJ_P0026593 Syn3 protein_coding protein_coding MGP_LPJ_T0026594.1 MGP_LPJ_G0017522.1 mouse_genomes_project 10 87682285 87691703 - Syn3 protein_coding processed_transcript MGP_LPJ_T0026595.1 MGP_LPJ_G0017522.1 mouse_genomes_project 10 87695334 88125267 - Syn3 protein_coding retained_intron MGP_LPJ_T0026596.1 MGP_LPJ_G0017522.1 mouse_genomes_project 10 87916798 88134240 - MGP_LPJ_P0026596 Syn3 protein_coding protein_coding MGP_LPJ_T0026601.1 MGP_LPJ_G0017522.1 mouse_genomes_project 10 87974330 88125267 - Syn3 protein_coding retained_intron MGP_LPJ_T0026602.1 MGP_LPJ_G0017522.1 mouse_genomes_project 10 87977700 88134254 - Syn3 protein_coding retained_intron MGP_LPJ_T0012391.1 MGP_LPJ_G0010482.1 mouse_genomes_project 10 20069568 20072790 + processed_pseudogene processed_pseudogene MGP_LPJ_T0024790.1 MGP_LPJ_G0017024.1 mouse_genomes_project 10 27092732 27113512 - MGP_LPJ_P0024790 2310057J18Rik protein_coding protein_coding MGP_LPJ_T0024791.1 MGP_LPJ_G0017024.1 mouse_genomes_project 10 27092808 27114421 - MGP_LPJ_P0024791 2310057J18Rik protein_coding protein_coding MGP_LPJ_T0024792.1 MGP_LPJ_G0017024.1 mouse_genomes_project 10 27092810 27094634 - 2310057J18Rik protein_coding retained_intron MGP_LPJ_T0024793.1 MGP_LPJ_G0017024.1 mouse_genomes_project 10 27092810 27114431 - MGP_LPJ_P0024793 2310057J18Rik protein_coding protein_coding MGP_LPJ_T0025840.1 MGP_LPJ_G0017317.1 mouse_genomes_project 10 78526641 78527312 + MGP_LPJ_P0025840 Krtap12-1 protein_coding protein_coding MGP_LPJ_T0027335.1 MGP_LPJ_G0017745.1 mouse_genomes_project 10 131942963 131949711 + MGP_LPJ_P0027335 Zbtb39 protein_coding protein_coding MGP_LPJ_T0027490.1 MGP_LPJ_G0017806.1 mouse_genomes_project 10 133390149 133392061 + MGP_LPJ_P0027490 Olfr763 protein_coding protein_coding MGP_LPJ_T0026439.1 MGP_LPJ_G0017479.1 mouse_genomes_project 10 82774860 82781549 - Tle6 protein_coding processed_transcript MGP_LPJ_T0026440.1 MGP_LPJ_G0017479.1 mouse_genomes_project 10 82774860 82791279 - MGP_LPJ_P0026440 Tle6 protein_coding protein_coding MGP_LPJ_T0026441.1 MGP_LPJ_G0017479.1 mouse_genomes_project 10 82774861 82779372 - Tle6 protein_coding retained_intron MGP_LPJ_T0026442.1 MGP_LPJ_G0017479.1 mouse_genomes_project 10 82774861 82776672 - Tle6 protein_coding processed_transcript MGP_LPJ_T0026443.1 MGP_LPJ_G0017479.1 mouse_genomes_project 10 82774861 82791304 - MGP_LPJ_P0026443 Tle6 protein_coding protein_coding MGP_LPJ_T0026444.1 MGP_LPJ_G0017479.1 mouse_genomes_project 10 82774863 82781304 - Tle6 protein_coding processed_transcript MGP_LPJ_T0026445.1 MGP_LPJ_G0017479.1 mouse_genomes_project 10 82775089 82776775 - Tle6 protein_coding retained_intron MGP_LPJ_T0026446.1 MGP_LPJ_G0017479.1 mouse_genomes_project 10 82777875 82779201 - Tle6 protein_coding retained_intron MGP_LPJ_T0026447.1 MGP_LPJ_G0017479.1 mouse_genomes_project 10 82778195 82779765 - Tle6 protein_coding retained_intron MGP_LPJ_T0026448.1 MGP_LPJ_G0017479.1 mouse_genomes_project 10 82779165 82781297 - Tle6 protein_coding processed_transcript MGP_LPJ_T0026449.1 MGP_LPJ_G0017479.1 mouse_genomes_project 10 82779185 82781290 - Tle6 protein_coding processed_transcript MGP_LPJ_T0026450.1 MGP_LPJ_G0017479.1 mouse_genomes_project 10 82779909 82781326 - Tle6 protein_coding processed_transcript MGP_LPJ_T0026451.1 MGP_LPJ_G0017479.1 mouse_genomes_project 10 82779949 82791261 - MGP_LPJ_P0026451 Tle6 protein_coding protein_coding MGP_LPJ_T0026452.1 MGP_LPJ_G0017479.1 mouse_genomes_project 10 82779952 82791477 - MGP_LPJ_P0026452 Tle6 protein_coding protein_coding MGP_LPJ_T0011292.1 MGP_LPJ_G0009410.1 mouse_genomes_project 10 94022808 94022963 - Gm27544 misc_RNA misc_RNA MGP_LPJ_T0100051.1 MGP_LPJ_G0038314.1 mouse_genomes_project 10 4922029 4922150 - Gm24726 snoRNA snoRNA MGP_LPJ_T0026872.1 MGP_LPJ_G0017586.1 mouse_genomes_project 10 97740733 97759544 - MGP_LPJ_P0026872 Nudt4 protein_coding protein_coding MGP_LPJ_T0027104.1 MGP_LPJ_G0017675.1 mouse_genomes_project 10 121317664 121349114 - MGP_LPJ_P0027104 Rap1b protein_coding protein_coding MGP_LPJ_T0012443.1 MGP_LPJ_G0010534.1 mouse_genomes_project 10 133038898 133046405 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100111.1 MGP_LPJ_G0038374.1 mouse_genomes_project 10 132375718 132375792 + Snord59a snoRNA snoRNA MGP_LPJ_T0098368.1 MGP_LPJ_G0036649.1 mouse_genomes_project 10 41559954 41560259 - Gm26464 ribozyme ribozyme MGP_LPJ_T0027337.1 MGP_LPJ_G0017747.1 mouse_genomes_project 10 131966222 131976510 + MGP_LPJ_P0027337 Rdh1 protein_coding protein_coding MGP_LPJ_T0024327.1 MGP_LPJ_G0016894.1 mouse_genomes_project 10 1393144 1425303 - MGP_LPJ_P0024327 Rmnd1 protein_coding protein_coding MGP_LPJ_T0024328.1 MGP_LPJ_G0016894.1 mouse_genomes_project 10 1394519 1400198 - Rmnd1 protein_coding retained_intron MGP_LPJ_T0024329.1 MGP_LPJ_G0016894.1 mouse_genomes_project 10 1394896 1400009 - MGP_LPJ_P0024329 Rmnd1 protein_coding protein_coding MGP_LPJ_T0024330.1 MGP_LPJ_G0016894.1 mouse_genomes_project 10 1395334 1406394 - Rmnd1 protein_coding retained_intron MGP_LPJ_T0024331.1 MGP_LPJ_G0016894.1 mouse_genomes_project 10 1418912 1425259 - Rmnd1 protein_coding retained_intron MGP_LPJ_T0024332.1 MGP_LPJ_G0016894.1 mouse_genomes_project 10 1420061 1425210 - MGP_LPJ_P0024332 Rmnd1 protein_coding protein_coding MGP_LPJ_T0024333.1 MGP_LPJ_G0016894.1 mouse_genomes_project 10 1420263 1425249 - MGP_LPJ_P0024333 Rmnd1 protein_coding protein_coding MGP_LPJ_T0024334.1 MGP_LPJ_G0016894.1 mouse_genomes_project 10 1420341 1425249 - MGP_LPJ_P0024334 Rmnd1 protein_coding protein_coding MGP_LPJ_T0024335.1 MGP_LPJ_G0016894.1 mouse_genomes_project 10 1421449 1425216 - Rmnd1 protein_coding retained_intron MGP_LPJ_T0027526.1 MGP_LPJ_G0017833.1 mouse_genomes_project 10 134081256 134082213 - MGP_LPJ_P0027526 Olfr801 protein_coding protein_coding MGP_LPJ_T0027529.1 MGP_LPJ_G0017833.1 mouse_genomes_project 10 134081813 134088031 - MGP_LPJ_P0027529 Olfr801 protein_coding protein_coding MGP_LPJ_T0027531.1 MGP_LPJ_G0017833.1 mouse_genomes_project 10 134084642 134088003 - Olfr801 protein_coding processed_transcript MGP_LPJ_T0098110.1 MGP_LPJ_G0036391.1 mouse_genomes_project 10 108544371 108544482 - n-R5s80 rRNA rRNA MGP_LPJ_T0025172.1 MGP_LPJ_G0017159.1 mouse_genomes_project 10 57806409 57916344 + MGP_LPJ_P0025172 Lims1 protein_coding protein_coding MGP_LPJ_T0025173.1 MGP_LPJ_G0017159.1 mouse_genomes_project 10 57883932 57913436 + MGP_LPJ_P0025173 Lims1 protein_coding protein_coding MGP_LPJ_T0025174.1 MGP_LPJ_G0017159.1 mouse_genomes_project 10 57883947 57913231 + MGP_LPJ_P0025174 Lims1 protein_coding protein_coding MGP_LPJ_T0025175.1 MGP_LPJ_G0017159.1 mouse_genomes_project 10 57898495 57900775 + Lims1 protein_coding processed_transcript MGP_LPJ_T0025176.1 MGP_LPJ_G0017159.1 mouse_genomes_project 10 57908296 57913317 + Lims1 protein_coding processed_transcript MGP_LPJ_T0000853.1 MGP_LPJ_G0000783.1 mouse_genomes_project 10 73726643 73727036 - TEC TEC MGP_LPJ_T0027524.1 MGP_LPJ_G0017831.1 mouse_genomes_project 10 134055866 134056802 + MGP_LPJ_P0027524 Olfr799 protein_coding protein_coding MGP_LPJ_T0024844.1 MGP_LPJ_G0017051.1 mouse_genomes_project 10 32418971 32424139 - MGP_LPJ_P0024844 Fam26e protein_coding protein_coding MGP_LPJ_T0003052.1 MGP_LPJ_G0002854.1 mouse_genomes_project 10 44214307 44216972 - Gm15934 antisense antisense MGP_LPJ_T0098829.1 MGP_LPJ_G0037092.1 mouse_genomes_project 10 29171730 29171837 - Gm24168 snRNA snRNA MGP_LPJ_T0098844.1 MGP_LPJ_G0037107.1 mouse_genomes_project 10 56618874 56618974 + Gm24285 snRNA snRNA MGP_LPJ_T0025456.1 MGP_LPJ_G0017235.1 mouse_genomes_project 10 67715159 67720669 + MGP_LPJ_P0025456 Egr2 protein_coding protein_coding MGP_LPJ_T0025457.1 MGP_LPJ_G0017235.1 mouse_genomes_project 10 67715267 67720804 + MGP_LPJ_P0025457 Egr2 protein_coding protein_coding MGP_LPJ_T0025458.1 MGP_LPJ_G0017235.1 mouse_genomes_project 10 67718295 67722611 + MGP_LPJ_P0025458 Egr2 protein_coding protein_coding MGP_LPJ_T0025459.1 MGP_LPJ_G0017235.1 mouse_genomes_project 10 67718296 67722611 + MGP_LPJ_P0025459 Egr2 protein_coding protein_coding MGP_LPJ_T0025460.1 MGP_LPJ_G0017235.1 mouse_genomes_project 10 67718296 67718807 + MGP_LPJ_P0025460 Egr2 protein_coding protein_coding MGP_LPJ_T0025461.1 MGP_LPJ_G0017235.1 mouse_genomes_project 10 67718356 67720364 + MGP_LPJ_P0025461 Egr2 protein_coding protein_coding MGP_LPJ_T0025462.1 MGP_LPJ_G0017235.1 mouse_genomes_project 10 67719109 67722611 + MGP_LPJ_P0025462 Egr2 protein_coding protein_coding MGP_LPJ_T0024595.1 MGP_LPJ_G0016953.1 mouse_genomes_project 10 15709457 15729313 - MGP_LPJ_P0024595 Ccdc28a protein_coding protein_coding MGP_LPJ_T0024596.1 MGP_LPJ_G0016953.1 mouse_genomes_project 10 15709465 15723767 - MGP_LPJ_P0024596 Ccdc28a protein_coding protein_coding MGP_LPJ_T0024597.1 MGP_LPJ_G0016953.1 mouse_genomes_project 10 15709558 15712111 - Ccdc28a protein_coding retained_intron MGP_LPJ_T0024598.1 MGP_LPJ_G0016953.1 mouse_genomes_project 10 15709841 15715964 - MGP_LPJ_P0024598 Ccdc28a protein_coding protein_coding MGP_LPJ_T0024599.1 MGP_LPJ_G0016953.1 mouse_genomes_project 10 15712559 15729301 - MGP_LPJ_P0024599 Ccdc28a protein_coding protein_coding MGP_LPJ_T0024367.1 MGP_LPJ_G0016904.1 mouse_genomes_project 10 2844627 2944363 - MGP_LPJ_P0024367 Rgs17 protein_coding protein_coding MGP_LPJ_T0024368.1 MGP_LPJ_G0016904.1 mouse_genomes_project 10 2844627 2944349 - MGP_LPJ_P0024368 Rgs17 protein_coding protein_coding MGP_LPJ_T0024369.1 MGP_LPJ_G0016904.1 mouse_genomes_project 10 2851144 2944329 - MGP_LPJ_P0024369 Rgs17 protein_coding protein_coding MGP_LPJ_T0024370.1 MGP_LPJ_G0016904.1 mouse_genomes_project 10 2852074 2944329 - MGP_LPJ_P0024370 Rgs17 protein_coding protein_coding MGP_LPJ_T0026222.1 MGP_LPJ_G0017422.1 mouse_genomes_project 10 81703704 81716606 + MGP_LPJ_P0026222 Scamp4 protein_coding protein_coding MGP_LPJ_T0026223.1 MGP_LPJ_G0017422.1 mouse_genomes_project 10 81704075 81715786 + MGP_LPJ_P0026223 Scamp4 protein_coding protein_coding MGP_LPJ_T0024481.1 MGP_LPJ_G0016926.1 mouse_genomes_project 10 7833444 7833955 + MGP_LPJ_P0024481 Gm10944 protein_coding protein_coding MGP_LPJ_T0003079.1 MGP_LPJ_G0002877.1 mouse_genomes_project 10 82153331 82154794 + Gm16099 antisense antisense MGP_LPJ_T0003080.1 MGP_LPJ_G0002877.1 mouse_genomes_project 10 82153603 82155088 + Gm16099 antisense antisense MGP_LPJ_T0025359.1 MGP_LPJ_G0017209.1 mouse_genomes_project 10 62246323 62266853 - MGP_LPJ_P0025359 Supv3l1 protein_coding protein_coding MGP_LPJ_T0025360.1 MGP_LPJ_G0017209.1 mouse_genomes_project 10 62246369 62266798 - MGP_LPJ_P0025360 Supv3l1 protein_coding nonsense_mediated_decay MGP_LPJ_T0025361.1 MGP_LPJ_G0017209.1 mouse_genomes_project 10 62246454 62247736 - Supv3l1 protein_coding retained_intron MGP_LPJ_T0025362.1 MGP_LPJ_G0017209.1 mouse_genomes_project 10 62246557 62248083 - Supv3l1 protein_coding retained_intron MGP_LPJ_T0025363.1 MGP_LPJ_G0017209.1 mouse_genomes_project 10 62249473 62250242 - Supv3l1 protein_coding processed_transcript MGP_LPJ_T0098842.1 MGP_LPJ_G0037105.1 mouse_genomes_project 10 53586271 53586378 - Gm26177 snRNA snRNA MGP_LPJ_T0009634.1 MGP_LPJ_G0007752.1 mouse_genomes_project 10 97752991 97753082 - Mir3058 miRNA miRNA MGP_LPJ_T0006184.1 MGP_LPJ_G0005162.1 mouse_genomes_project 10 123048224 123062543 + 1700025F24Rik lincRNA lincRNA MGP_LPJ_T0024912.1 MGP_LPJ_G0017073.1 mouse_genomes_project 10 38465172 38496364 - MGP_LPJ_P0024912 Mfsd4b5 protein_coding protein_coding MGP_LPJ_T0024913.1 MGP_LPJ_G0017073.1 mouse_genomes_project 10 38477717 38496367 - MGP_LPJ_P0024913 Mfsd4b5 protein_coding protein_coding MGP_LPJ_T0024914.1 MGP_LPJ_G0017073.1 mouse_genomes_project 10 38479544 38496360 - MGP_LPJ_P0024914 Mfsd4b5 protein_coding protein_coding MGP_LPJ_T0024915.1 MGP_LPJ_G0017073.1 mouse_genomes_project 10 38482671 38496361 - MGP_LPJ_P0024915 Mfsd4b5 protein_coding protein_coding MGP_LPJ_T0024916.1 MGP_LPJ_G0017073.1 mouse_genomes_project 10 38483646 38484300 - MGP_LPJ_P0024916 Mfsd4b5 protein_coding protein_coding MGP_LPJ_T0027536.1 MGP_LPJ_G0017838.1 mouse_genomes_project 10 134156890 134161060 - MGP_LPJ_P0027536 Olfr806 protein_coding protein_coding MGP_LPJ_T0027537.1 MGP_LPJ_G0017838.1 mouse_genomes_project 10 134156890 134157832 - MGP_LPJ_P0027537 Olfr806 protein_coding protein_coding MGP_LPJ_T0027387.1 MGP_LPJ_G0017764.1 mouse_genomes_project 10 132532003 132538358 + MGP_LPJ_P0027387 Mip protein_coding protein_coding MGP_LPJ_T0003084.1 MGP_LPJ_G0002879.1 mouse_genomes_project 10 82459610 82460827 - Gm16315 antisense antisense MGP_LPJ_T0009635.1 MGP_LPJ_G0007753.1 mouse_genomes_project 10 99121906 99121995 - Gm24587 miRNA miRNA MGP_LPJ_T0026633.1 MGP_LPJ_G0017534.1 mouse_genomes_project 10 89599477 89673864 + MGP_LPJ_P0026633 Igf1 protein_coding protein_coding MGP_LPJ_T0026634.1 MGP_LPJ_G0017534.1 mouse_genomes_project 10 89602061 89680011 + MGP_LPJ_P0026634 Igf1 protein_coding protein_coding MGP_LPJ_T0026635.1 MGP_LPJ_G0017534.1 mouse_genomes_project 10 89602251 89674770 + MGP_LPJ_P0026635 Igf1 protein_coding protein_coding MGP_LPJ_T0026636.1 MGP_LPJ_G0017534.1 mouse_genomes_project 10 89602483 89673862 + MGP_LPJ_P0026636 Igf1 protein_coding protein_coding MGP_LPJ_T0026637.1 MGP_LPJ_G0017534.1 mouse_genomes_project 10 89602604 89658350 + MGP_LPJ_P0026637 Igf1 protein_coding protein_coding MGP_LPJ_T0026638.1 MGP_LPJ_G0017534.1 mouse_genomes_project 10 89603023 89658895 + MGP_LPJ_P0026638 Igf1 protein_coding protein_coding MGP_LPJ_T0026639.1 MGP_LPJ_G0017534.1 mouse_genomes_project 10 89603599 89673868 + MGP_LPJ_P0026639 Igf1 protein_coding protein_coding MGP_LPJ_T0026640.1 MGP_LPJ_G0017534.1 mouse_genomes_project 10 89604322 89673846 + MGP_LPJ_P0026640 Igf1 protein_coding protein_coding MGP_LPJ_T0025050.1 MGP_LPJ_G0017113.1 mouse_genomes_project 10 42702012 42730602 - MGP_LPJ_P0025050 Qrsl1 protein_coding protein_coding MGP_LPJ_T0025051.1 MGP_LPJ_G0017113.1 mouse_genomes_project 10 42702246 42704929 - Qrsl1 protein_coding retained_intron MGP_LPJ_T0025052.1 MGP_LPJ_G0017113.1 mouse_genomes_project 10 42709164 42730602 - Qrsl1 protein_coding retained_intron MGP_LPJ_T0000857.1 MGP_LPJ_G0000787.1 mouse_genomes_project 10 85549851 85550321 + TEC TEC MGP_LPJ_T0027275.1 MGP_LPJ_G0017730.1 mouse_genomes_project 10 131488570 131495875 + MGP_LPJ_P0027275 Arhgap9 protein_coding protein_coding MGP_LPJ_T0024836.1 MGP_LPJ_G0017044.1 mouse_genomes_project 10 32176589 32191793 + MGP_LPJ_P0024836 Sult3a1 protein_coding protein_coding MGP_LPJ_T0026906.1 MGP_LPJ_G0017607.1 mouse_genomes_project 10 102970845 103057000 + MGP_LPJ_P0026906 Cep290 protein_coding unknown_likely_coding MGP_LPJ_T0026907.1 MGP_LPJ_G0017607.1 mouse_genomes_project 10 102971499 103057313 + MGP_LPJ_P0026907 Cep290 protein_coding protein_coding MGP_LPJ_T0024609.1 MGP_LPJ_G0016956.1 mouse_genomes_project 10 16093237 16261478 - MGP_LPJ_P0024609 Arfgef3 protein_coding protein_coding MGP_LPJ_T0003129.1 MGP_LPJ_G0002912.1 mouse_genomes_project 10 132857988 132861360 + Gm29585 antisense antisense MGP_LPJ_T0003130.1 MGP_LPJ_G0002912.1 mouse_genomes_project 10 132860294 132861381 + Gm29585 antisense antisense MGP_LPJ_T0003131.1 MGP_LPJ_G0002912.1 mouse_genomes_project 10 132861051 132881202 + Gm29585 antisense antisense MGP_LPJ_T0025380.1 MGP_LPJ_G0017214.1 mouse_genomes_project 10 62404195 62428790 - MGP_LPJ_P0025380 Ddx21 protein_coding protein_coding MGP_LPJ_T0009593.1 MGP_LPJ_G0007711.1 mouse_genomes_project 10 43825251 43825362 - Gm24271 miRNA miRNA MGP_LPJ_T0024855.1 MGP_LPJ_G0017058.1 mouse_genomes_project 10 32828814 32965241 + MGP_LPJ_P0024855 Frk protein_coding protein_coding MGP_LPJ_T0024856.1 MGP_LPJ_G0017058.1 mouse_genomes_project 10 32828814 32965241 + MGP_LPJ_P0024856 Frk protein_coding protein_coding MGP_LPJ_T0026958.1 MGP_LPJ_G0017621.1 mouse_genomes_project 10 110080096 110235443 + MGP_LPJ_P0026958 Lin7a protein_coding protein_coding MGP_LPJ_T0026959.1 MGP_LPJ_G0017621.1 mouse_genomes_project 10 110080096 110235443 + MGP_LPJ_P0026959 Lin7a protein_coding protein_coding MGP_LPJ_T0026884.1 MGP_LPJ_G0017596.1 mouse_genomes_project 10 100067071 100068953 - MGP_LPJ_P0026884 C030005K15Rik protein_coding protein_coding MGP_LPJ_T0101241.1 MGP_LPJ_G0039490.1 mouse_genomes_project 10 27015834 27047461 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101242.1 MGP_LPJ_G0039490.1 mouse_genomes_project 10 27047022 27049601 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0024926.1 MGP_LPJ_G0017077.1 mouse_genomes_project 10 38776600 38785787 - MGP_LPJ_P0024926 Gtf3c6 protein_coding protein_coding MGP_LPJ_T0025181.1 MGP_LPJ_G0017164.1 mouse_genomes_project 10 58233033 58237638 - MGP_LPJ_P0025181 Gm17542 protein_coding protein_coding MGP_LPJ_T0100099.1 MGP_LPJ_G0038362.1 mouse_genomes_project 10 108665290 108665422 - Gm24237 snoRNA snoRNA MGP_LPJ_T0009653.1 MGP_LPJ_G0007771.1 mouse_genomes_project 10 132376860 132376938 + Mir677 miRNA miRNA MGP_LPJ_T0024911.1 MGP_LPJ_G0017072.1 mouse_genomes_project 10 38450641 38467265 - MGP_LPJ_P0024911 Mfsd4b3 protein_coding protein_coding MGP_LPJ_T0003119.1 MGP_LPJ_G0002903.1 mouse_genomes_project 10 123401532 123417158 - Grip1os2 antisense antisense MGP_LPJ_T0025335.1 MGP_LPJ_G0017207.1 mouse_genomes_project 10 62073985 62153910 - MGP_LPJ_P0025335 Hk1 protein_coding protein_coding MGP_LPJ_T0025336.1 MGP_LPJ_G0017207.1 mouse_genomes_project 10 62074234 62193358 - MGP_LPJ_P0025336 Hk1 protein_coding protein_coding MGP_LPJ_T0025337.1 MGP_LPJ_G0017207.1 mouse_genomes_project 10 62074238 62171775 - MGP_LPJ_P0025337 Hk1 protein_coding protein_coding MGP_LPJ_T0025338.1 MGP_LPJ_G0017207.1 mouse_genomes_project 10 62075039 62156090 - MGP_LPJ_P0025338 Hk1 protein_coding protein_coding MGP_LPJ_T0025339.1 MGP_LPJ_G0017207.1 mouse_genomes_project 10 62093041 62098577 - Hk1 protein_coding retained_intron MGP_LPJ_T0025340.1 MGP_LPJ_G0017207.1 mouse_genomes_project 10 62104107 62128292 - MGP_LPJ_P0025340 Hk1 protein_coding protein_coding MGP_LPJ_T0025341.1 MGP_LPJ_G0017207.1 mouse_genomes_project 10 62104340 62137139 - MGP_LPJ_P0025341 Hk1 protein_coding protein_coding MGP_LPJ_T0025342.1 MGP_LPJ_G0017207.1 mouse_genomes_project 10 62106837 62156067 - MGP_LPJ_P0025342 Hk1 protein_coding protein_coding MGP_LPJ_T0025343.1 MGP_LPJ_G0017207.1 mouse_genomes_project 10 62107082 62156076 - Hk1 protein_coding retained_intron MGP_LPJ_T0025344.1 MGP_LPJ_G0017207.1 mouse_genomes_project 10 62125376 62193302 - MGP_LPJ_P0025344 Hk1 protein_coding protein_coding MGP_LPJ_T0025345.1 MGP_LPJ_G0017207.1 mouse_genomes_project 10 62125376 62188550 - MGP_LPJ_P0025345 Hk1 protein_coding protein_coding MGP_LPJ_T0025346.1 MGP_LPJ_G0017207.1 mouse_genomes_project 10 62125376 62193302 - MGP_LPJ_P0025346 Hk1 protein_coding protein_coding MGP_LPJ_T0025347.1 MGP_LPJ_G0017207.1 mouse_genomes_project 10 62125376 62188550 - MGP_LPJ_P0025347 Hk1 protein_coding protein_coding MGP_LPJ_T0025348.1 MGP_LPJ_G0017207.1 mouse_genomes_project 10 62125376 62188550 - MGP_LPJ_P0025348 Hk1 protein_coding protein_coding MGP_LPJ_T0025349.1 MGP_LPJ_G0017207.1 mouse_genomes_project 10 62125376 62188550 - MGP_LPJ_P0025349 Hk1 protein_coding protein_coding MGP_LPJ_T0025350.1 MGP_LPJ_G0017207.1 mouse_genomes_project 10 62125376 62188550 - MGP_LPJ_P0025350 Hk1 protein_coding protein_coding MGP_LPJ_T0025351.1 MGP_LPJ_G0017207.1 mouse_genomes_project 10 62125376 62188550 - MGP_LPJ_P0025351 Hk1 protein_coding protein_coding MGP_LPJ_T0025352.1 MGP_LPJ_G0017207.1 mouse_genomes_project 10 62125376 62193302 - MGP_LPJ_P0025352 Hk1 protein_coding protein_coding MGP_LPJ_T0025353.1 MGP_LPJ_G0017207.1 mouse_genomes_project 10 62125376 62188550 - MGP_LPJ_P0025353 Hk1 protein_coding protein_coding MGP_LPJ_T0025354.1 MGP_LPJ_G0017207.1 mouse_genomes_project 10 62125421 62175687 - MGP_LPJ_P0025354 Hk1 protein_coding protein_coding MGP_LPJ_T0027048.1 MGP_LPJ_G0017657.1 mouse_genomes_project 10 119652290 119745870 + MGP_LPJ_P0027048 Ptprb protein_coding protein_coding MGP_LPJ_T0026553.1 MGP_LPJ_G0017507.1 mouse_genomes_project 10 86270447 86428894 + MGP_LPJ_P0026553 Rfx4 protein_coding protein_coding MGP_LPJ_T0026554.1 MGP_LPJ_G0017507.1 mouse_genomes_project 10 86278280 86332207 + Rfx4 protein_coding processed_transcript MGP_LPJ_T0026555.1 MGP_LPJ_G0017507.1 mouse_genomes_project 10 86278280 86332207 + Rfx4 protein_coding processed_transcript MGP_LPJ_T0026556.1 MGP_LPJ_G0017507.1 mouse_genomes_project 10 86358417 86394001 + Rfx4 protein_coding processed_transcript MGP_LPJ_T0026557.1 MGP_LPJ_G0017507.1 mouse_genomes_project 10 86358417 86429040 + MGP_LPJ_P0026557 Rfx4 protein_coding protein_coding MGP_LPJ_T0025665.1 MGP_LPJ_G0017268.1 mouse_genomes_project 10 76219028 76229208 - MGP_LPJ_P0025665 Lrrc75b protein_coding protein_coding MGP_LPJ_T0027269.1 MGP_LPJ_G0017729.1 mouse_genomes_project 10 131456774 131473521 - MGP_LPJ_P0027269 Mars protein_coding protein_coding MGP_LPJ_T0027270.1 MGP_LPJ_G0017729.1 mouse_genomes_project 10 131456775 131473521 - MGP_LPJ_P0027270 Mars protein_coding protein_coding MGP_LPJ_T0027271.1 MGP_LPJ_G0017729.1 mouse_genomes_project 10 131456779 131473413 - Mars protein_coding retained_intron MGP_LPJ_T0027272.1 MGP_LPJ_G0017729.1 mouse_genomes_project 10 131456779 131459584 - MGP_LPJ_P0027272 Mars protein_coding protein_coding MGP_LPJ_T0027273.1 MGP_LPJ_G0017729.1 mouse_genomes_project 10 131456902 131459495 - Mars protein_coding retained_intron MGP_LPJ_T0027274.1 MGP_LPJ_G0017729.1 mouse_genomes_project 10 131469735 131470673 - Mars protein_coding retained_intron MGP_LPJ_T0027471.1 MGP_LPJ_G0017798.1 mouse_genomes_project 10 133188743 133251435 + MGP_LPJ_P0027471 Sarnp protein_coding protein_coding MGP_LPJ_T0024644.1 MGP_LPJ_G0016970.1 mouse_genomes_project 10 17856568 17889395 + MGP_LPJ_P0024644 Bclaf1 protein_coding protein_coding MGP_LPJ_T0024645.1 MGP_LPJ_G0016970.1 mouse_genomes_project 10 17856571 17887161 + MGP_LPJ_P0024645 Bclaf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024646.1 MGP_LPJ_G0016970.1 mouse_genomes_project 10 17856583 17889393 + MGP_LPJ_P0024646 Bclaf1 protein_coding protein_coding MGP_LPJ_T0024647.1 MGP_LPJ_G0016970.1 mouse_genomes_project 10 17856627 17869499 + Bclaf1 protein_coding retained_intron MGP_LPJ_T0024648.1 MGP_LPJ_G0016970.1 mouse_genomes_project 10 17856628 17887157 + MGP_LPJ_P0024648 Bclaf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024649.1 MGP_LPJ_G0016970.1 mouse_genomes_project 10 17856636 17887158 + MGP_LPJ_P0024649 Bclaf1 protein_coding protein_coding MGP_LPJ_T0024650.1 MGP_LPJ_G0016970.1 mouse_genomes_project 10 17870623 17891506 + MGP_LPJ_P0024650 Bclaf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024651.1 MGP_LPJ_G0016970.1 mouse_genomes_project 10 17872950 17879164 + MGP_LPJ_P0024651 Bclaf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024652.1 MGP_LPJ_G0016970.1 mouse_genomes_project 10 17875954 17880796 + Bclaf1 protein_coding retained_intron MGP_LPJ_T0024653.1 MGP_LPJ_G0016970.1 mouse_genomes_project 10 17880159 17887101 + Bclaf1 protein_coding retained_intron MGP_LPJ_T0098851.1 MGP_LPJ_G0037114.1 mouse_genomes_project 10 80725050 80725157 - Gm25794 snRNA snRNA MGP_LPJ_T0027073.1 MGP_LPJ_G0017664.1 mouse_genomes_project 10 120455442 120456870 + MGP_LPJ_P0027073 Lrrc10 protein_coding protein_coding MGP_LPJ_T0003036.1 MGP_LPJ_G0002842.1 mouse_genomes_project 10 18736158 18745276 + Gm26577 antisense antisense MGP_LPJ_T0003053.1 MGP_LPJ_G0002855.1 mouse_genomes_project 10 59354484 59355474 - Gm17059 antisense antisense MGP_LPJ_T0025136.1 MGP_LPJ_G0017148.1 mouse_genomes_project 10 55761778 55778069 + MGP_LPJ_P0025136 Gja1 protein_coding protein_coding MGP_LPJ_T0100052.1 MGP_LPJ_G0038315.1 mouse_genomes_project 10 5908924 5909061 - Gm25410 snoRNA snoRNA MGP_LPJ_T0026808.1 MGP_LPJ_G0017570.1 mouse_genomes_project 10 95688298 95693631 + MGP_LPJ_P0026808 Ntn4 protein_coding protein_coding MGP_LPJ_T0026809.1 MGP_LPJ_G0017570.1 mouse_genomes_project 10 95688666 95797743 + MGP_LPJ_P0026809 Ntn4 protein_coding protein_coding MGP_LPJ_T0024312.1 MGP_LPJ_G0016889.1 mouse_genomes_project 10 483362 498872 + MGP_LPJ_P0024312 Iyd protein_coding protein_coding MGP_LPJ_T0024313.1 MGP_LPJ_G0016889.1 mouse_genomes_project 10 483410 496101 + Iyd protein_coding retained_intron MGP_LPJ_T0097972.1 MGP_LPJ_G0036253.1 mouse_genomes_project 10 81946556 81950539 + pseudogene pseudogene MGP_LPJ_T0025961.1 MGP_LPJ_G0017361.1 mouse_genomes_project 10 80654748 80660231 - MGP_LPJ_P0025961 Odf3l2 protein_coding protein_coding MGP_LPJ_T0024582.1 MGP_LPJ_G0016949.1 mouse_genomes_project 10 15371512 15422317 - MGP_LPJ_P0024582 Heca protein_coding protein_coding MGP_LPJ_T0027306.1 MGP_LPJ_G0017738.1 mouse_genomes_project 10 131716991 131726062 - MGP_LPJ_P0027306 Nxph4 protein_coding protein_coding MGP_LPJ_T0098819.1 MGP_LPJ_G0037082.1 mouse_genomes_project 10 5730959 5731065 + Gm24374 snRNA snRNA MGP_LPJ_T0026878.1 MGP_LPJ_G0017591.1 mouse_genomes_project 10 99889830 99896968 + MGP_LPJ_P0026878 Lum protein_coding protein_coding MGP_LPJ_T0025121.1 MGP_LPJ_G0017144.1 mouse_genomes_project 10 52894952 53005501 - MGP_LPJ_P0025121 Fam184a protein_coding protein_coding MGP_LPJ_T0025122.1 MGP_LPJ_G0017144.1 mouse_genomes_project 10 52895173 52949584 - MGP_LPJ_P0025122 Fam184a protein_coding protein_coding MGP_LPJ_T0025123.1 MGP_LPJ_G0017144.1 mouse_genomes_project 10 52895176 52916478 - MGP_LPJ_P0025123 Fam184a protein_coding nonsense_mediated_decay MGP_LPJ_T0025124.1 MGP_LPJ_G0017144.1 mouse_genomes_project 10 52895177 52954104 - MGP_LPJ_P0025124 Fam184a protein_coding protein_coding MGP_LPJ_T0025125.1 MGP_LPJ_G0017144.1 mouse_genomes_project 10 52895437 52908639 - MGP_LPJ_P0025125 Fam184a protein_coding protein_coding MGP_LPJ_T0025126.1 MGP_LPJ_G0017144.1 mouse_genomes_project 10 52895441 52900077 - MGP_LPJ_P0025126 Fam184a protein_coding protein_coding MGP_LPJ_T0025127.1 MGP_LPJ_G0017144.1 mouse_genomes_project 10 52899987 52933840 - Fam184a protein_coding processed_transcript MGP_LPJ_T0025128.1 MGP_LPJ_G0017144.1 mouse_genomes_project 10 52951757 53005530 - Fam184a protein_coding retained_intron MGP_LPJ_T0024812.1 MGP_LPJ_G0017034.1 mouse_genomes_project 10 28872358 29002720 - MGP_LPJ_P0024812 Ncoa7 protein_coding unknown_likely_coding MGP_LPJ_T0024813.1 MGP_LPJ_G0017034.1 mouse_genomes_project 10 28872359 28882686 - MGP_LPJ_P0024813 Ncoa7 protein_coding protein_coding MGP_LPJ_T0024814.1 MGP_LPJ_G0017034.1 mouse_genomes_project 10 28872359 29034463 - MGP_LPJ_P0024814 Ncoa7 protein_coding protein_coding MGP_LPJ_T0024835.1 MGP_LPJ_G0017043.1 mouse_genomes_project 10 32071789 32088690 - MGP_LPJ_P0024835 Sult3a2 protein_coding protein_coding MGP_LPJ_T0027165.1 MGP_LPJ_G0017693.1 mouse_genomes_project 10 125155372 125189171 + MGP_LPJ_P0027165 Gns protein_coding protein_coding MGP_LPJ_T0098869.1 MGP_LPJ_G0037132.1 mouse_genomes_project 10 107562035 107562140 - Gm25522 snRNA snRNA MGP_LPJ_T0098874.1 MGP_LPJ_G0037137.1 mouse_genomes_project 10 116123161 116123321 + Gm22507 snRNA snRNA MGP_LPJ_T0009658.1 MGP_LPJ_G0007776.1 mouse_genomes_project 10 132787656 132787745 + Mir8105 miRNA miRNA MGP_LPJ_T0009599.1 MGP_LPJ_G0007717.1 mouse_genomes_project 10 59811822 59811889 - Gm22117 miRNA miRNA MGP_LPJ_T0027512.1 MGP_LPJ_G0017822.1 mouse_genomes_project 10 133870511 133871447 + MGP_LPJ_P0027512 Olfr788 protein_coding protein_coding MGP_LPJ_T0025365.1 MGP_LPJ_G0017211.1 mouse_genomes_project 10 62272004 62303799 - MGP_LPJ_P0025365 Vps26a protein_coding protein_coding MGP_LPJ_T0025366.1 MGP_LPJ_G0017211.1 mouse_genomes_project 10 62272004 62303592 - MGP_LPJ_P0025366 Vps26a protein_coding protein_coding MGP_LPJ_T0027498.1 MGP_LPJ_G0017811.1 mouse_genomes_project 10 133560190 133561144 - MGP_LPJ_P0027498 Olfr771 protein_coding protein_coding MGP_LPJ_T0027514.1 MGP_LPJ_G0017824.1 mouse_genomes_project 10 133903169 133904239 + MGP_LPJ_P0027514 Olfr790 protein_coding protein_coding MGP_LPJ_T0003040.1 MGP_LPJ_G0002846.1 mouse_genomes_project 10 38034835 38036855 - Gm16364 antisense antisense MGP_LPJ_T0026423.1 MGP_LPJ_G0017478.1 mouse_genomes_project 10 82756823 82774423 + Tle2 protein_coding retained_intron MGP_LPJ_T0026424.1 MGP_LPJ_G0017478.1 mouse_genomes_project 10 82756996 82758058 + MGP_LPJ_P0026424 Tle2 protein_coding protein_coding MGP_LPJ_T0026425.1 MGP_LPJ_G0017478.1 mouse_genomes_project 10 82757001 82762551 + MGP_LPJ_P0026425 Tle2 protein_coding protein_coding MGP_LPJ_T0026426.1 MGP_LPJ_G0017478.1 mouse_genomes_project 10 82757485 82774427 + Tle2 protein_coding retained_intron MGP_LPJ_T0026427.1 MGP_LPJ_G0017478.1 mouse_genomes_project 10 82757487 82774430 + MGP_LPJ_P0026427 Tle2 protein_coding protein_coding MGP_LPJ_T0026428.1 MGP_LPJ_G0017478.1 mouse_genomes_project 10 82757556 82774430 + MGP_LPJ_P0026428 Tle2 protein_coding protein_coding MGP_LPJ_T0026429.1 MGP_LPJ_G0017478.1 mouse_genomes_project 10 82757642 82774425 + Tle2 protein_coding retained_intron MGP_LPJ_T0026430.1 MGP_LPJ_G0017478.1 mouse_genomes_project 10 82757724 82762861 + MGP_LPJ_P0026430 Tle2 protein_coding protein_coding MGP_LPJ_T0026431.1 MGP_LPJ_G0017478.1 mouse_genomes_project 10 82757757 82774802 + MGP_LPJ_P0026431 Tle2 protein_coding protein_coding MGP_LPJ_T0026432.1 MGP_LPJ_G0017478.1 mouse_genomes_project 10 82763059 82770884 + Tle2 protein_coding retained_intron MGP_LPJ_T0026433.1 MGP_LPJ_G0017478.1 mouse_genomes_project 10 82764768 82770841 + Tle2 protein_coding retained_intron MGP_LPJ_T0026434.1 MGP_LPJ_G0017478.1 mouse_genomes_project 10 82771048 82771903 + Tle2 protein_coding retained_intron MGP_LPJ_T0026435.1 MGP_LPJ_G0017478.1 mouse_genomes_project 10 82771382 82774380 + Tle2 protein_coding retained_intron MGP_LPJ_T0026436.1 MGP_LPJ_G0017478.1 mouse_genomes_project 10 82771925 82774430 + MGP_LPJ_P0026436 Tle2 protein_coding protein_coding MGP_LPJ_T0026437.1 MGP_LPJ_G0017478.1 mouse_genomes_project 10 82771955 82774430 + MGP_LPJ_P0026437 Tle2 protein_coding protein_coding MGP_LPJ_T0026438.1 MGP_LPJ_G0017478.1 mouse_genomes_project 10 82772597 82774258 + Tle2 protein_coding retained_intron MGP_LPJ_T0026609.1 MGP_LPJ_G0017526.1 mouse_genomes_project 10 88360826 88373804 - Hsp90b1 protein_coding retained_intron MGP_LPJ_T0026610.1 MGP_LPJ_G0017526.1 mouse_genomes_project 10 88361466 88377353 - MGP_LPJ_P0026610 Hsp90b1 protein_coding protein_coding MGP_LPJ_T0026611.1 MGP_LPJ_G0017526.1 mouse_genomes_project 10 88363028 88370274 - MGP_LPJ_P0026611 Hsp90b1 protein_coding protein_coding MGP_LPJ_T0026612.1 MGP_LPJ_G0017526.1 mouse_genomes_project 10 88364648 88366349 - Hsp90b1 protein_coding retained_intron MGP_LPJ_T0026613.1 MGP_LPJ_G0017526.1 mouse_genomes_project 10 88373781 88374937 - Hsp90b1 protein_coding retained_intron MGP_LPJ_T0024611.1 MGP_LPJ_G0016958.1 mouse_genomes_project 10 16366134 16378045 + MGP_LPJ_P0024611 Perp protein_coding protein_coding MGP_LPJ_T0024763.1 MGP_LPJ_G0017017.1 mouse_genomes_project 10 24112797 24113990 + MGP_LPJ_P0024763 Gm9767 protein_coding protein_coding MGP_LPJ_T0012394.1 MGP_LPJ_G0010485.1 mouse_genomes_project 10 23857715 23858333 - processed_pseudogene processed_pseudogene MGP_LPJ_T0027499.1 MGP_LPJ_G0017812.1 mouse_genomes_project 10 133585529 133586465 - MGP_LPJ_P0027499 Olfr772 protein_coding protein_coding MGP_LPJ_T0009632.1 MGP_LPJ_G0007750.1 mouse_genomes_project 10 96021740 96021836 - Mir331 miRNA miRNA MGP_LPJ_T0100091.1 MGP_LPJ_G0038354.1 mouse_genomes_project 10 82326309 82326373 + Snord37 snoRNA snoRNA MGP_LPJ_T0012416.1 MGP_LPJ_G0010507.1 mouse_genomes_project 10 61043178 61043722 + processed_pseudogene processed_pseudogene MGP_LPJ_T0025392.1 MGP_LPJ_G0017219.1 mouse_genomes_project 10 62773144 62800492 + MGP_LPJ_P0025392 Slc25a16 protein_coding protein_coding MGP_LPJ_T0025393.1 MGP_LPJ_G0017219.1 mouse_genomes_project 10 62773178 62781944 + Slc25a16 protein_coding retained_intron MGP_LPJ_T0025394.1 MGP_LPJ_G0017219.1 mouse_genomes_project 10 62773191 62798423 + MGP_LPJ_P0025394 Slc25a16 protein_coding protein_coding MGP_LPJ_T0025395.1 MGP_LPJ_G0017219.1 mouse_genomes_project 10 62796435 62798428 + Slc25a16 protein_coding retained_intron MGP_LPJ_T0025550.1 MGP_LPJ_G0017249.1 mouse_genomes_project 10 70842612 70966652 + MGP_LPJ_P0025550 Fam13c protein_coding protein_coding MGP_LPJ_T0025551.1 MGP_LPJ_G0017249.1 mouse_genomes_project 10 70842824 70966652 + MGP_LPJ_P0025551 Fam13c protein_coding protein_coding MGP_LPJ_T0025552.1 MGP_LPJ_G0017249.1 mouse_genomes_project 10 70842870 70966654 + MGP_LPJ_P0025552 Fam13c protein_coding protein_coding MGP_LPJ_T0024901.1 MGP_LPJ_G0017069.1 mouse_genomes_project 10 38227193 38374280 + MGP_LPJ_P0024901 Rev3l protein_coding protein_coding MGP_LPJ_T0024902.1 MGP_LPJ_G0017069.1 mouse_genomes_project 10 38227202 38374237 + MGP_LPJ_P0024902 Rev3l protein_coding nonsense_mediated_decay MGP_LPJ_T0024903.1 MGP_LPJ_G0017069.1 mouse_genomes_project 10 38227439 38374275 + MGP_LPJ_P0024903 Rev3l protein_coding protein_coding MGP_LPJ_T0024904.1 MGP_LPJ_G0017069.1 mouse_genomes_project 10 38322860 38374277 + MGP_LPJ_P0024904 Rev3l protein_coding nonsense_mediated_decay MGP_LPJ_T0024905.1 MGP_LPJ_G0017069.1 mouse_genomes_project 10 38326003 38341890 + Rev3l protein_coding retained_intron MGP_LPJ_T0024906.1 MGP_LPJ_G0017069.1 mouse_genomes_project 10 38357995 38362041 + Rev3l protein_coding retained_intron MGP_LPJ_T0024907.1 MGP_LPJ_G0017069.1 mouse_genomes_project 10 38366179 38373557 + Rev3l protein_coding retained_intron MGP_LPJ_T0025410.1 MGP_LPJ_G0017222.1 mouse_genomes_project 10 62876209 62885338 - MGP_LPJ_P0025410 Hnrnph3 protein_coding protein_coding MGP_LPJ_T0025411.1 MGP_LPJ_G0017222.1 mouse_genomes_project 10 62876209 62885338 - MGP_LPJ_P0025411 Hnrnph3 protein_coding protein_coding MGP_LPJ_T0025412.1 MGP_LPJ_G0017222.1 mouse_genomes_project 10 62876973 62885661 - MGP_LPJ_P0025412 Hnrnph3 protein_coding nonsense_mediated_decay MGP_LPJ_T0025413.1 MGP_LPJ_G0017222.1 mouse_genomes_project 10 62876976 62877714 - Hnrnph3 protein_coding retained_intron MGP_LPJ_T0025414.1 MGP_LPJ_G0017222.1 mouse_genomes_project 10 62877963 62879630 - Hnrnph3 protein_coding retained_intron MGP_LPJ_T0025415.1 MGP_LPJ_G0017222.1 mouse_genomes_project 10 62879352 62885291 - MGP_LPJ_P0025415 Hnrnph3 protein_coding protein_coding MGP_LPJ_T0026544.1 MGP_LPJ_G0017502.1 mouse_genomes_project 10 85192577 85242942 + MGP_LPJ_P0026544 1500009L16Rik protein_coding protein_coding MGP_LPJ_T0027489.1 MGP_LPJ_G0017805.1 mouse_genomes_project 10 133368788 133370550 + MGP_LPJ_P0027489 Olfr9 protein_coding protein_coding MGP_LPJ_T0027432.1 MGP_LPJ_G0017780.1 mouse_genomes_project 10 132827610 132834441 - MGP_LPJ_P0027432 Myl6b protein_coding protein_coding MGP_LPJ_T0024731.1 MGP_LPJ_G0017009.1 mouse_genomes_project 10 22614508 22684479 - MGP_LPJ_P0024731 Enpp1 protein_coding protein_coding MGP_LPJ_T0024732.1 MGP_LPJ_G0017009.1 mouse_genomes_project 10 22618029 22684480 - MGP_LPJ_P0024732 Enpp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024733.1 MGP_LPJ_G0017009.1 mouse_genomes_project 10 22618400 22684312 - MGP_LPJ_P0024733 Enpp1 protein_coding protein_coding MGP_LPJ_T0024734.1 MGP_LPJ_G0017009.1 mouse_genomes_project 10 22624332 22684318 - Enpp1 protein_coding retained_intron MGP_LPJ_T0024735.1 MGP_LPJ_G0017009.1 mouse_genomes_project 10 22645269 22651071 - Enpp1 protein_coding retained_intron MGP_LPJ_T0025846.1 MGP_LPJ_G0017323.1 mouse_genomes_project 10 78662056 78721428 + MGP_LPJ_P0025846 Tspear protein_coding protein_coding MGP_LPJ_T0025847.1 MGP_LPJ_G0017323.1 mouse_genomes_project 10 78662121 78726707 + MGP_LPJ_P0025847 Tspear protein_coding protein_coding MGP_LPJ_T0025848.1 MGP_LPJ_G0017323.1 mouse_genomes_project 10 78703693 78707113 + Tspear protein_coding retained_intron MGP_LPJ_T0003086.1 MGP_LPJ_G0002881.1 mouse_genomes_project 10 82627097 82628911 + Gm16105 antisense antisense MGP_LPJ_T0027465.1 MGP_LPJ_G0017794.1 mouse_genomes_project 10 133158683 133168494 + MGP_LPJ_P0027465 Mmp19 protein_coding protein_coding MGP_LPJ_T0025355.1 MGP_LPJ_G0017208.1 mouse_genomes_project 10 62196570 62238509 - MGP_LPJ_P0025355 Hkdc1 protein_coding protein_coding MGP_LPJ_T0025356.1 MGP_LPJ_G0017208.1 mouse_genomes_project 10 62209855 62215058 - Hkdc1 protein_coding retained_intron MGP_LPJ_T0025357.1 MGP_LPJ_G0017208.1 mouse_genomes_project 10 62224497 62226513 - Hkdc1 protein_coding retained_intron MGP_LPJ_T0025358.1 MGP_LPJ_G0017208.1 mouse_genomes_project 10 62230997 62238426 - Hkdc1 protein_coding retained_intron MGP_LPJ_T0026401.1 MGP_LPJ_G0017472.1 mouse_genomes_project 10 82625164 82654111 - MGP_LPJ_P0026401 Celf5 protein_coding protein_coding MGP_LPJ_T0026402.1 MGP_LPJ_G0017472.1 mouse_genomes_project 10 82632953 82638956 - Celf5 protein_coding retained_intron MGP_LPJ_T0026403.1 MGP_LPJ_G0017472.1 mouse_genomes_project 10 82633445 82645095 - Celf5 protein_coding retained_intron MGP_LPJ_T0026404.1 MGP_LPJ_G0017472.1 mouse_genomes_project 10 82633697 82654097 - Celf5 protein_coding retained_intron MGP_LPJ_T0026405.1 MGP_LPJ_G0017472.1 mouse_genomes_project 10 82635383 82644719 - MGP_LPJ_P0026405 Celf5 protein_coding protein_coding MGP_LPJ_T0027259.1 MGP_LPJ_G0017727.1 mouse_genomes_project 10 131441311 131449560 - MGP_LPJ_P0027259 Mbd6 protein_coding protein_coding MGP_LPJ_T0027260.1 MGP_LPJ_G0017727.1 mouse_genomes_project 10 131441311 131443020 - MGP_LPJ_P0027260 Mbd6 protein_coding nonsense_mediated_decay MGP_LPJ_T0027261.1 MGP_LPJ_G0017727.1 mouse_genomes_project 10 131441311 131449435 - MGP_LPJ_P0027261 Mbd6 protein_coding protein_coding MGP_LPJ_T0027262.1 MGP_LPJ_G0017727.1 mouse_genomes_project 10 131441311 131445252 - MGP_LPJ_P0027262 Mbd6 protein_coding nonsense_mediated_decay MGP_LPJ_T0027263.1 MGP_LPJ_G0017727.1 mouse_genomes_project 10 131442031 131443710 - MGP_LPJ_P0027263 Mbd6 protein_coding protein_coding MGP_LPJ_T0027264.1 MGP_LPJ_G0017727.1 mouse_genomes_project 10 131442877 131443723 - MGP_LPJ_P0027264 Mbd6 protein_coding protein_coding MGP_LPJ_T0027265.1 MGP_LPJ_G0017727.1 mouse_genomes_project 10 131445919 131449398 - MGP_LPJ_P0027265 Mbd6 protein_coding protein_coding MGP_LPJ_T0011305.1 MGP_LPJ_G0009423.1 mouse_genomes_project 10 128414843 128415102 + Gm23777 misc_RNA misc_RNA MGP_LPJ_T0025192.1 MGP_LPJ_G0017169.1 mouse_genomes_project 10 58944447 58964165 + MGP_LPJ_P0025192 Pla2g12b protein_coding protein_coding MGP_LPJ_T0025193.1 MGP_LPJ_G0017169.1 mouse_genomes_project 10 58951810 58964159 + MGP_LPJ_P0025193 Pla2g12b protein_coding protein_coding MGP_LPJ_T0000860.1 MGP_LPJ_G0000789.1 mouse_genomes_project 10 100846433 100846797 - TEC TEC MGP_LPJ_T0026897.1 MGP_LPJ_G0017603.1 mouse_genomes_project 10 102189377 102191331 - MGP_LPJ_P0026897 Csl protein_coding protein_coding MGP_LPJ_T0025096.1 MGP_LPJ_G0017131.1 mouse_genomes_project 10 50943717 50944739 - MGP_LPJ_P0025096 4933411G06Rik protein_coding protein_coding MGP_LPJ_T0012393.1 MGP_LPJ_G0010484.1 mouse_genomes_project 10 22536750 22537496 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006175.1 MGP_LPJ_G0005157.1 mouse_genomes_project 10 115891164 115961752 + 1700010J16Rik lincRNA lincRNA MGP_LPJ_T0006176.1 MGP_LPJ_G0005157.1 mouse_genomes_project 10 115891202 115961755 + 1700010J16Rik lincRNA lincRNA MGP_LPJ_T0025735.1 MGP_LPJ_G0017290.1 mouse_genomes_project 10 76995113 77002425 + MGP_LPJ_P0025735 S100b protein_coding protein_coding MGP_LPJ_T0012384.1 MGP_LPJ_G0010475.1 mouse_genomes_project 10 8560896 8561625 - processed_pseudogene processed_pseudogene MGP_LPJ_T0027507.1 MGP_LPJ_G0017818.1 mouse_genomes_project 10 133748933 134123398 + MGP_LPJ_P0027507 Olfr782 protein_coding protein_coding MGP_LPJ_T0003069.1 MGP_LPJ_G0002868.1 mouse_genomes_project 10 77034457 77036153 + Gm16240 antisense antisense MGP_LPJ_T0024583.1 MGP_LPJ_G0016950.1 mouse_genomes_project 10 15490489 15517560 - MGP_LPJ_P0024583 Abracl protein_coding protein_coding MGP_LPJ_T0026072.1 MGP_LPJ_G0017392.1 mouse_genomes_project 10 81101564 81113060 + Gpx4 protein_coding processed_transcript MGP_LPJ_T0026073.1 MGP_LPJ_G0017392.1 mouse_genomes_project 10 81107840 81113060 + MGP_LPJ_P0026073 Gpx4 protein_coding protein_coding MGP_LPJ_T0026074.1 MGP_LPJ_G0017392.1 mouse_genomes_project 10 81108387 81111728 + Gpx4 protein_coding processed_transcript MGP_LPJ_T0026075.1 MGP_LPJ_G0017392.1 mouse_genomes_project 10 81108389 81113060 + MGP_LPJ_P0026075 Gpx4 protein_coding protein_coding MGP_LPJ_T0026076.1 MGP_LPJ_G0017392.1 mouse_genomes_project 10 81108817 81113015 + MGP_LPJ_P0026076 Gpx4 protein_coding protein_coding MGP_LPJ_T0026077.1 MGP_LPJ_G0017392.1 mouse_genomes_project 10 81112514 81112986 + Gpx4 protein_coding retained_intron MGP_LPJ_T0026078.1 MGP_LPJ_G0017392.1 mouse_genomes_project 10 81112618 81112984 + Gpx4 protein_coding retained_intron MGP_LPJ_T0024548.1 MGP_LPJ_G0016940.1 mouse_genomes_project 10 10828110 10838625 + MGP_LPJ_P0024548 Adat2 protein_coding protein_coding MGP_LPJ_T0101746.1 MGP_LPJ_G0039784.1 mouse_genomes_project 10 107947340 107947499 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0009659.1 MGP_LPJ_G0007777.1 mouse_genomes_project 10 132847733 132847796 - Mir6916 miRNA miRNA MGP_LPJ_T0101749.1 MGP_LPJ_G0039787.1 mouse_genomes_project 10 133413958 133414888 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0024336.1 MGP_LPJ_G0016895.1 mouse_genomes_project 10 1425530 1432813 + MGP_LPJ_P0024336 Armt1 protein_coding protein_coding MGP_LPJ_T0024337.1 MGP_LPJ_G0016895.1 mouse_genomes_project 10 1425537 1443274 + Armt1 protein_coding processed_transcript MGP_LPJ_T0024338.1 MGP_LPJ_G0016895.1 mouse_genomes_project 10 1425545 1428010 + Armt1 protein_coding retained_intron MGP_LPJ_T0024339.1 MGP_LPJ_G0016895.1 mouse_genomes_project 10 1425548 1447944 + MGP_LPJ_P0024339 Armt1 protein_coding protein_coding MGP_LPJ_T0024340.1 MGP_LPJ_G0016895.1 mouse_genomes_project 10 1425550 1446787 + MGP_LPJ_P0024340 Armt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024341.1 MGP_LPJ_G0016895.1 mouse_genomes_project 10 1427416 1433368 + Armt1 protein_coding processed_transcript MGP_LPJ_T0025919.1 MGP_LPJ_G0017343.1 mouse_genomes_project 10 79663037 79670189 - MGP_LPJ_P0025919 Ccdc105 protein_coding protein_coding MGP_LPJ_T0006183.1 MGP_LPJ_G0005161.1 mouse_genomes_project 10 122694883 122705285 + 1700064J06Rik lincRNA lincRNA MGP_LPJ_T0026616.1 MGP_LPJ_G0017528.1 mouse_genomes_project 10 88406904 88407388 - MGP_LPJ_P0026616 Fabp3-ps1 protein_coding protein_coding MGP_LPJ_T0009656.1 MGP_LPJ_G0007774.1 mouse_genomes_project 10 132715134 132715203 + Mir6915 miRNA miRNA MGP_LPJ_T0025997.1 MGP_LPJ_G0017374.1 mouse_genomes_project 10 80851041 80863339 + MGP_LPJ_P0025997 Misp protein_coding protein_coding MGP_LPJ_T0025998.1 MGP_LPJ_G0017374.1 mouse_genomes_project 10 80852647 80863339 + MGP_LPJ_P0025998 Misp protein_coding protein_coding MGP_LPJ_T0025465.1 MGP_LPJ_G0017238.1 mouse_genomes_project 10 68086395 68117254 - MGP_LPJ_P0025465 Zfp365 protein_coding protein_coding MGP_LPJ_T0025466.1 MGP_LPJ_G0017238.1 mouse_genomes_project 10 68086460 68104706 - Zfp365 protein_coding processed_transcript MGP_LPJ_T0025467.1 MGP_LPJ_G0017238.1 mouse_genomes_project 10 68093382 68102392 - Zfp365 protein_coding processed_transcript MGP_LPJ_T0025468.1 MGP_LPJ_G0017238.1 mouse_genomes_project 10 68100089 68117027 - Zfp365 protein_coding retained_intron MGP_LPJ_T0098831.1 MGP_LPJ_G0037094.1 mouse_genomes_project 10 37061671 37061778 - Gm22911 snRNA snRNA MGP_LPJ_T0027009.1 MGP_LPJ_G0017641.1 mouse_genomes_project 10 115322630 115387090 + MGP_LPJ_P0027009 protein_coding protein_coding MGP_LPJ_T0027010.1 MGP_LPJ_G0017641.1 mouse_genomes_project 10 115325908 115386651 + MGP_LPJ_P0027010 protein_coding protein_coding MGP_LPJ_T0100103.1 MGP_LPJ_G0038366.1 mouse_genomes_project 10 113796407 113796535 + Gm23698 snoRNA snoRNA MGP_LPJ_T0026687.1 MGP_LPJ_G0017545.1 mouse_genomes_project 10 90523954 90528858 + MGP_LPJ_P0026687 Arl1 protein_coding protein_coding MGP_LPJ_T0026688.1 MGP_LPJ_G0017545.1 mouse_genomes_project 10 90524657 90536013 + MGP_LPJ_P0026688 Arl1 protein_coding protein_coding MGP_LPJ_T0027402.1 MGP_LPJ_G0017766.1 mouse_genomes_project 10 132561518 132563289 + MGP_LPJ_P0027402 Apon protein_coding protein_coding MGP_LPJ_T0026776.1 MGP_LPJ_G0017560.1 mouse_genomes_project 10 94669057 94707199 - MGP_LPJ_P0026776 Nedd1 protein_coding protein_coding MGP_LPJ_T0026777.1 MGP_LPJ_G0017560.1 mouse_genomes_project 10 94670503 94707203 - MGP_LPJ_P0026777 Nedd1 protein_coding unknown_likely_coding MGP_LPJ_T0025306.1 MGP_LPJ_G0017200.1 mouse_genomes_project 10 61476430 61499721 + MGP_LPJ_P0025306 Aifm2 protein_coding protein_coding MGP_LPJ_T0025307.1 MGP_LPJ_G0017200.1 mouse_genomes_project 10 61476454 61488999 + Aifm2 protein_coding retained_intron MGP_LPJ_T0025308.1 MGP_LPJ_G0017200.1 mouse_genomes_project 10 61476478 61500328 + MGP_LPJ_P0025308 Aifm2 protein_coding protein_coding MGP_LPJ_T0025309.1 MGP_LPJ_G0017200.1 mouse_genomes_project 10 61476490 61499715 + MGP_LPJ_P0025309 Aifm2 protein_coding protein_coding MGP_LPJ_T0025310.1 MGP_LPJ_G0017200.1 mouse_genomes_project 10 61476499 61477403 + Aifm2 protein_coding processed_transcript MGP_LPJ_T0025311.1 MGP_LPJ_G0017200.1 mouse_genomes_project 10 61481394 61499721 + MGP_LPJ_P0025311 Aifm2 protein_coding protein_coding MGP_LPJ_T0025312.1 MGP_LPJ_G0017200.1 mouse_genomes_project 10 61489225 61495638 + Aifm2 protein_coding retained_intron MGP_LPJ_T0003097.1 MGP_LPJ_G0002890.1 mouse_genomes_project 10 88667265 88738318 + Gm16271 antisense antisense MGP_LPJ_T0025870.1 MGP_LPJ_G0017328.1 mouse_genomes_project 10 78886738 78905365 - MGP_LPJ_P0025870 Aire protein_coding protein_coding MGP_LPJ_T0025871.1 MGP_LPJ_G0017328.1 mouse_genomes_project 10 78886738 78905365 - MGP_LPJ_P0025871 Aire protein_coding protein_coding MGP_LPJ_T0025872.1 MGP_LPJ_G0017328.1 mouse_genomes_project 10 78886738 78905365 - MGP_LPJ_P0025872 Aire protein_coding protein_coding MGP_LPJ_T0025873.1 MGP_LPJ_G0017328.1 mouse_genomes_project 10 78886739 78900006 - Aire protein_coding retained_intron MGP_LPJ_T0025874.1 MGP_LPJ_G0017328.1 mouse_genomes_project 10 78886739 78905395 - MGP_LPJ_P0025874 Aire protein_coding nonsense_mediated_decay MGP_LPJ_T0025875.1 MGP_LPJ_G0017328.1 mouse_genomes_project 10 78886747 78905365 - MGP_LPJ_P0025875 Aire protein_coding protein_coding MGP_LPJ_T0025876.1 MGP_LPJ_G0017328.1 mouse_genomes_project 10 78886747 78905365 - MGP_LPJ_P0025876 Aire protein_coding protein_coding MGP_LPJ_T0025877.1 MGP_LPJ_G0017328.1 mouse_genomes_project 10 78886747 78905365 - MGP_LPJ_P0025877 Aire protein_coding protein_coding MGP_LPJ_T0025878.1 MGP_LPJ_G0017328.1 mouse_genomes_project 10 78886747 78905365 - MGP_LPJ_P0025878 Aire protein_coding protein_coding MGP_LPJ_T0025879.1 MGP_LPJ_G0017328.1 mouse_genomes_project 10 78886747 78905365 - MGP_LPJ_P0025879 Aire protein_coding protein_coding MGP_LPJ_T0025880.1 MGP_LPJ_G0017328.1 mouse_genomes_project 10 78886747 78905365 - MGP_LPJ_P0025880 Aire protein_coding protein_coding MGP_LPJ_T0025881.1 MGP_LPJ_G0017328.1 mouse_genomes_project 10 78886747 78905365 - MGP_LPJ_P0025881 Aire protein_coding protein_coding MGP_LPJ_T0025882.1 MGP_LPJ_G0017328.1 mouse_genomes_project 10 78886787 78905365 - MGP_LPJ_P0025882 Aire protein_coding protein_coding MGP_LPJ_T0025883.1 MGP_LPJ_G0017328.1 mouse_genomes_project 10 78886787 78905357 - MGP_LPJ_P0025883 Aire protein_coding nonsense_mediated_decay MGP_LPJ_T0025884.1 MGP_LPJ_G0017328.1 mouse_genomes_project 10 78893823 78900008 - Aire protein_coding retained_intron MGP_LPJ_T0025885.1 MGP_LPJ_G0017328.1 mouse_genomes_project 10 78898040 78903502 - Aire protein_coding retained_intron MGP_LPJ_T0025233.1 MGP_LPJ_G0017179.1 mouse_genomes_project 10 59778771 59819898 - MGP_LPJ_P0025233 Chst3 protein_coding protein_coding MGP_LPJ_T0025234.1 MGP_LPJ_G0017179.1 mouse_genomes_project 10 59778773 59785947 - MGP_LPJ_P0025234 Chst3 protein_coding protein_coding MGP_LPJ_T0025235.1 MGP_LPJ_G0017179.1 mouse_genomes_project 10 59782844 59793574 - MGP_LPJ_P0025235 Chst3 protein_coding protein_coding MGP_LPJ_T0024310.1 MGP_LPJ_G0016887.1 mouse_genomes_project 10 172474 184424 - MGP_LPJ_P0024310 H60c protein_coding protein_coding MGP_LPJ_T0025963.1 MGP_LPJ_G0017363.1 mouse_genomes_project 10 80685718 80694003 + MGP_LPJ_P0025963 Tpgs1 protein_coding protein_coding MGP_LPJ_T0006179.1 MGP_LPJ_G0005160.1 mouse_genomes_project 10 120366599 120369289 + D630029K05Rik lincRNA lincRNA MGP_LPJ_T0006180.1 MGP_LPJ_G0005160.1 mouse_genomes_project 10 120366632 120369476 + D630029K05Rik lincRNA lincRNA MGP_LPJ_T0006181.1 MGP_LPJ_G0005160.1 mouse_genomes_project 10 120367647 120369606 + D630029K05Rik lincRNA lincRNA MGP_LPJ_T0006182.1 MGP_LPJ_G0005160.1 mouse_genomes_project 10 120368166 120370999 + D630029K05Rik lincRNA lincRNA MGP_LPJ_T0011295.1 MGP_LPJ_G0009413.1 mouse_genomes_project 10 94056006 94056269 - Gm27588 misc_RNA misc_RNA MGP_LPJ_T0026691.1 MGP_LPJ_G0017548.1 mouse_genomes_project 10 90745602 91061447 - MGP_LPJ_P0026691 Ano4 protein_coding nonsense_mediated_decay MGP_LPJ_T0026692.1 MGP_LPJ_G0017548.1 mouse_genomes_project 10 90745603 91061247 - MGP_LPJ_P0026692 Ano4 protein_coding protein_coding MGP_LPJ_T0026693.1 MGP_LPJ_G0017548.1 mouse_genomes_project 10 90745609 91061279 - MGP_LPJ_P0026693 Ano4 protein_coding protein_coding MGP_LPJ_T0026694.1 MGP_LPJ_G0017548.1 mouse_genomes_project 10 90745610 91060957 - MGP_LPJ_P0026694 Ano4 protein_coding protein_coding MGP_LPJ_T0026695.1 MGP_LPJ_G0017548.1 mouse_genomes_project 10 90777834 90795443 - MGP_LPJ_P0026695 Ano4 protein_coding protein_coding MGP_LPJ_T0026696.1 MGP_LPJ_G0017548.1 mouse_genomes_project 10 90790161 90823870 - Ano4 protein_coding processed_transcript MGP_LPJ_T0026697.1 MGP_LPJ_G0017548.1 mouse_genomes_project 10 90814405 91061211 - Ano4 protein_coding retained_intron MGP_LPJ_T0026698.1 MGP_LPJ_G0017548.1 mouse_genomes_project 10 90835271 91155904 - MGP_LPJ_P0026698 Ano4 protein_coding nonsense_mediated_decay MGP_LPJ_T0026699.1 MGP_LPJ_G0017548.1 mouse_genomes_project 10 90861325 91061247 - MGP_LPJ_P0026699 Ano4 protein_coding nonsense_mediated_decay MGP_LPJ_T0026700.1 MGP_LPJ_G0017548.1 mouse_genomes_project 10 90861877 91060793 - MGP_LPJ_P0026700 Ano4 protein_coding protein_coding MGP_LPJ_T0026701.1 MGP_LPJ_G0017548.1 mouse_genomes_project 10 90882159 91121555 - MGP_LPJ_P0026701 Ano4 protein_coding protein_coding MGP_LPJ_T0026702.1 MGP_LPJ_G0017548.1 mouse_genomes_project 10 91146959 91156021 - Ano4 protein_coding processed_transcript MGP_LPJ_T0026514.1 MGP_LPJ_G0017495.1 mouse_genomes_project 10 84368311 84371242 + MGP_LPJ_P0026514 Gm4799 protein_coding protein_coding MGP_LPJ_T0098837.1 MGP_LPJ_G0037100.1 mouse_genomes_project 10 45356581 45356688 + Gm25740 snRNA snRNA MGP_LPJ_T0003033.1 MGP_LPJ_G0002840.1 mouse_genomes_project 10 12110920 12113172 - B230364G03Rik antisense antisense MGP_LPJ_T0024673.1 MGP_LPJ_G0016978.1 mouse_genomes_project 10 19201950 19233243 + MGP_LPJ_P0024673 1700020N01Rik protein_coding protein_coding MGP_LPJ_T0024674.1 MGP_LPJ_G0016978.1 mouse_genomes_project 10 19225212 19232632 + 1700020N01Rik protein_coding processed_transcript MGP_LPJ_T0025454.1 MGP_LPJ_G0017234.1 mouse_genomes_project 10 67419841 67438358 - MGP_LPJ_P0025454 Nrbf2 protein_coding protein_coding MGP_LPJ_T0025455.1 MGP_LPJ_G0017234.1 mouse_genomes_project 10 67420992 67438233 - MGP_LPJ_P0025455 Nrbf2 protein_coding protein_coding MGP_LPJ_T0027245.1 MGP_LPJ_G0017721.1 mouse_genomes_project 10 131326305 131334156 - MGP_LPJ_P0027245 Slc26a10 protein_coding unknown_likely_coding MGP_LPJ_T0027246.1 MGP_LPJ_G0017721.1 mouse_genomes_project 10 131326306 131334509 - MGP_LPJ_P0027246 Slc26a10 protein_coding protein_coding MGP_LPJ_T0006144.1 MGP_LPJ_G0005141.1 mouse_genomes_project 10 88356625 88365434 + lincRNA lincRNA MGP_LPJ_T0024714.1 MGP_LPJ_G0016995.1 mouse_genomes_project 10 21890966 21891980 + MGP_LPJ_P0024714 Taar5 protein_coding protein_coding MGP_LPJ_T0025721.1 MGP_LPJ_G0017284.1 mouse_genomes_project 10 76646364 76652796 + MGP_LPJ_P0025721 Vpreb3 protein_coding protein_coding MGP_LPJ_T0025722.1 MGP_LPJ_G0017284.1 mouse_genomes_project 10 76651458 76652816 + MGP_LPJ_P0025722 Vpreb3 protein_coding protein_coding MGP_LPJ_T0025500.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 69827434 70196118 + protein_coding retained_intron MGP_LPJ_T0025501.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 69827434 70027520 + protein_coding processed_transcript MGP_LPJ_T0025502.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 69827434 70373970 + MGP_LPJ_P0025502 protein_coding protein_coding MGP_LPJ_T0025503.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 69827477 70170824 + protein_coding retained_intron MGP_LPJ_T0025504.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 69827505 70371180 + MGP_LPJ_P0025504 protein_coding protein_coding MGP_LPJ_T0025505.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 69827509 70371436 + MGP_LPJ_P0025505 protein_coding protein_coding MGP_LPJ_T0025506.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 69827509 70371436 + MGP_LPJ_P0025506 protein_coding protein_coding MGP_LPJ_T0025507.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 69827727 70141171 + MGP_LPJ_P0025507 protein_coding protein_coding MGP_LPJ_T0025508.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 69827870 70370420 + MGP_LPJ_P0025508 protein_coding protein_coding MGP_LPJ_T0025509.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 69827884 70362169 + MGP_LPJ_P0025509 protein_coding protein_coding MGP_LPJ_T0025510.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 69827884 70362169 + MGP_LPJ_P0025510 protein_coding protein_coding MGP_LPJ_T0025511.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 69827884 70362169 + MGP_LPJ_P0025511 protein_coding protein_coding MGP_LPJ_T0025512.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 69827884 70362169 + MGP_LPJ_P0025512 protein_coding protein_coding MGP_LPJ_T0025513.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 69827884 70362169 + MGP_LPJ_P0025513 protein_coding protein_coding MGP_LPJ_T0025514.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70010133 70014314 + protein_coding retained_intron MGP_LPJ_T0025515.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70010207 70362167 + MGP_LPJ_P0025515 protein_coding protein_coding MGP_LPJ_T0025516.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70010311 70339142 + protein_coding retained_intron MGP_LPJ_T0025517.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70010315 70138725 + protein_coding retained_intron MGP_LPJ_T0025518.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70100507 70125335 + protein_coding retained_intron MGP_LPJ_T0025519.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70100518 70182181 + MGP_LPJ_P0025519 protein_coding protein_coding MGP_LPJ_T0025520.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70102449 70170245 + MGP_LPJ_P0025520 protein_coding protein_coding MGP_LPJ_T0025521.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70221560 70370475 + MGP_LPJ_P0025521 protein_coding protein_coding MGP_LPJ_T0025522.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70222498 70316315 + MGP_LPJ_P0025522 protein_coding protein_coding MGP_LPJ_T0025523.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70240181 70284526 + protein_coding retained_intron MGP_LPJ_T0025524.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70251659 70252503 + protein_coding retained_intron MGP_LPJ_T0025525.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70251659 70370511 + MGP_LPJ_P0025525 protein_coding protein_coding MGP_LPJ_T0025526.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70251696 70371508 + MGP_LPJ_P0025526 protein_coding protein_coding MGP_LPJ_T0025527.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70251937 70371436 + MGP_LPJ_P0025527 protein_coding protein_coding MGP_LPJ_T0025528.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70251937 70371436 + MGP_LPJ_P0025528 protein_coding protein_coding MGP_LPJ_T0025529.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70251937 70371436 + MGP_LPJ_P0025529 protein_coding protein_coding MGP_LPJ_T0025530.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70251969 70362341 + MGP_LPJ_P0025530 protein_coding protein_coding MGP_LPJ_T0025531.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70251983 70338412 + protein_coding retained_intron MGP_LPJ_T0025532.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70252118 70371197 + MGP_LPJ_P0025532 protein_coding protein_coding MGP_LPJ_T0025533.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70252244 70371180 + MGP_LPJ_P0025533 protein_coding protein_coding MGP_LPJ_T0025534.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70252297 70370549 + MGP_LPJ_P0025534 protein_coding protein_coding MGP_LPJ_T0025535.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70316226 70326214 + protein_coding retained_intron MGP_LPJ_T0025536.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70322382 70343335 + MGP_LPJ_P0025536 protein_coding protein_coding MGP_LPJ_T0025537.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70323273 70330012 + MGP_LPJ_P0025537 protein_coding protein_coding MGP_LPJ_T0025538.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70324234 70371436 + MGP_LPJ_P0025538 protein_coding protein_coding MGP_LPJ_T0025539.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70326035 70343540 + protein_coding retained_intron MGP_LPJ_T0025540.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70331750 70371182 + MGP_LPJ_P0025540 protein_coding protein_coding MGP_LPJ_T0025541.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70333836 70371001 + MGP_LPJ_P0025541 protein_coding nonsense_mediated_decay MGP_LPJ_T0025542.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70335992 70342005 + MGP_LPJ_P0025542 protein_coding protein_coding MGP_LPJ_T0025543.1 MGP_LPJ_G0017246.1 mouse_genomes_project 10 70338204 70348561 + protein_coding retained_intron MGP_LPJ_T0025895.1 MGP_LPJ_G0017331.1 mouse_genomes_project 10 79038582 79046284 - MGP_LPJ_P0025895 D10Jhu81e protein_coding protein_coding MGP_LPJ_T0025424.1 MGP_LPJ_G0017227.1 mouse_genomes_project 10 63242222 63316223 - MGP_LPJ_P0025424 Sirt1 protein_coding protein_coding MGP_LPJ_T0025425.1 MGP_LPJ_G0017227.1 mouse_genomes_project 10 63242224 63263610 - MGP_LPJ_P0025425 Sirt1 protein_coding protein_coding MGP_LPJ_T0025426.1 MGP_LPJ_G0017227.1 mouse_genomes_project 10 63242224 63263610 - MGP_LPJ_P0025426 Sirt1 protein_coding protein_coding MGP_LPJ_T0025427.1 MGP_LPJ_G0017227.1 mouse_genomes_project 10 63242224 63261566 - MGP_LPJ_P0025427 Sirt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0025428.1 MGP_LPJ_G0017227.1 mouse_genomes_project 10 63242228 63249708 - MGP_LPJ_P0025428 Sirt1 protein_coding unknown_likely_coding MGP_LPJ_T0025429.1 MGP_LPJ_G0017227.1 mouse_genomes_project 10 63242275 63263613 - MGP_LPJ_P0025429 Sirt1 protein_coding protein_coding MGP_LPJ_T0025430.1 MGP_LPJ_G0017227.1 mouse_genomes_project 10 63254409 63261566 - Sirt1 protein_coding retained_intron MGP_LPJ_T0097970.1 MGP_LPJ_G0036251.1 mouse_genomes_project 10 73636747 73637219 + pseudogene pseudogene MGP_LPJ_T0026415.1 MGP_LPJ_G0017474.1 mouse_genomes_project 10 82670809 82673197 - MGP_LPJ_P0026415 S1pr4 protein_coding protein_coding MGP_LPJ_T0009638.1 MGP_LPJ_G0007756.1 mouse_genomes_project 10 106973208 106973316 + Mir6411 miRNA miRNA MGP_LPJ_T0011293.1 MGP_LPJ_G0009411.1 mouse_genomes_project 10 94026939 94027132 - Gm27999 misc_RNA misc_RNA MGP_LPJ_T0012389.1 MGP_LPJ_G0010480.1 mouse_genomes_project 10 18879229 18881274 + processed_pseudogene processed_pseudogene MGP_LPJ_T0027411.1 MGP_LPJ_G0017773.1 mouse_genomes_project 10 132687605 132694541 - MGP_LPJ_P0027411 Coq10a protein_coding protein_coding MGP_LPJ_T0024713.1 MGP_LPJ_G0016994.1 mouse_genomes_project 10 21880764 21881808 + MGP_LPJ_P0024713 Taar4 protein_coding protein_coding MGP_LPJ_T0006117.1 MGP_LPJ_G0005121.1 mouse_genomes_project 10 60726514 60733287 + Gm20611 lincRNA lincRNA MGP_LPJ_T0027406.1 MGP_LPJ_G0017769.1 mouse_genomes_project 10 132615407 132617352 - MGP_LPJ_P0027406 Il23a protein_coding protein_coding MGP_LPJ_T0027462.1 MGP_LPJ_G0017791.1 mouse_genomes_project 10 133065568 133082596 + MGP_LPJ_P0027462 Pmel protein_coding protein_coding MGP_LPJ_T0025479.1 MGP_LPJ_G0017243.1 mouse_genomes_project 10 69428738 69518520 + MGP_LPJ_P0025479 Rhobtb1 protein_coding protein_coding MGP_LPJ_T0025480.1 MGP_LPJ_G0017243.1 mouse_genomes_project 10 69480910 69566863 + MGP_LPJ_P0025480 Rhobtb1 protein_coding protein_coding MGP_LPJ_T0025482.1 MGP_LPJ_G0017243.1 mouse_genomes_project 10 69486658 69568754 + MGP_LPJ_P0025482 Rhobtb1 protein_coding protein_coding MGP_LPJ_T0025483.1 MGP_LPJ_G0017243.1 mouse_genomes_project 10 69486681 69548064 + Rhobtb1 protein_coding retained_intron MGP_LPJ_T0025484.1 MGP_LPJ_G0017243.1 mouse_genomes_project 10 69486700 69566961 + MGP_LPJ_P0025484 Rhobtb1 protein_coding protein_coding MGP_LPJ_T0025485.1 MGP_LPJ_G0017243.1 mouse_genomes_project 10 69487108 69539644 + MGP_LPJ_P0025485 Rhobtb1 protein_coding protein_coding MGP_LPJ_T0025486.1 MGP_LPJ_G0017243.1 mouse_genomes_project 10 69487195 69518530 + MGP_LPJ_P0025486 Rhobtb1 protein_coding protein_coding MGP_LPJ_T0025487.1 MGP_LPJ_G0017243.1 mouse_genomes_project 10 69487218 69568743 + MGP_LPJ_P0025487 Rhobtb1 protein_coding protein_coding MGP_LPJ_T0025488.1 MGP_LPJ_G0017243.1 mouse_genomes_project 10 69489326 69566673 + MGP_LPJ_P0025488 Rhobtb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0025489.1 MGP_LPJ_G0017243.1 mouse_genomes_project 10 69493399 69518535 + MGP_LPJ_P0025489 Rhobtb1 protein_coding protein_coding MGP_LPJ_T0025490.1 MGP_LPJ_G0017243.1 mouse_genomes_project 10 69539090 69543589 + Rhobtb1 protein_coding processed_transcript MGP_LPJ_T0025491.1 MGP_LPJ_G0017243.1 mouse_genomes_project 10 69553828 69566961 + MGP_LPJ_P0025491 Rhobtb1 protein_coding protein_coding MGP_LPJ_T0025492.1 MGP_LPJ_G0017243.1 mouse_genomes_project 10 69553941 69563870 + Rhobtb1 protein_coding processed_transcript MGP_LPJ_T0024529.1 MGP_LPJ_G0016935.1 mouse_genomes_project 10 10404025 10432044 - MGP_LPJ_P0024529 Zc2hc1b protein_coding protein_coding MGP_LPJ_T0027433.1 MGP_LPJ_G0017781.1 mouse_genomes_project 10 132846014 132861583 - MGP_LPJ_P0027433 Esyt1 protein_coding protein_coding MGP_LPJ_T0003109.1 MGP_LPJ_G0002897.1 mouse_genomes_project 10 118026132 118053490 + 4930473D10Rik antisense antisense MGP_LPJ_T0009647.1 MGP_LPJ_G0007765.1 mouse_genomes_project 10 126864069 126864154 - Mirlet7i miRNA miRNA MGP_LPJ_T0003090.1 MGP_LPJ_G0002884.1 mouse_genomes_project 10 84557683 84560572 - 1700025N21Rik antisense antisense MGP_LPJ_T0026966.1 MGP_LPJ_G0017627.1 mouse_genomes_project 10 111202173 111288756 + MGP_LPJ_P0026966 Pawr protein_coding protein_coding MGP_LPJ_T0027174.1 MGP_LPJ_G0017698.1 mouse_genomes_project 10 125557340 125570302 + MGP_LPJ_P0027174 BC048403 protein_coding protein_coding MGP_LPJ_T0027175.1 MGP_LPJ_G0017698.1 mouse_genomes_project 10 125557341 125570315 + MGP_LPJ_P0027175 BC048403 protein_coding protein_coding MGP_LPJ_T0027176.1 MGP_LPJ_G0017698.1 mouse_genomes_project 10 125568321 125569810 + BC048403 protein_coding processed_transcript MGP_LPJ_T0012435.1 MGP_LPJ_G0010526.1 mouse_genomes_project 10 108232346 108233270 - processed_pseudogene processed_pseudogene MGP_LPJ_T0026506.1 MGP_LPJ_G0017493.1 mouse_genomes_project 10 84146560 84162014 - MGP_LPJ_P0026506 Nfyb protein_coding protein_coding MGP_LPJ_T0026507.1 MGP_LPJ_G0017493.1 mouse_genomes_project 10 84147152 84161971 - Nfyb protein_coding retained_intron MGP_LPJ_T0026508.1 MGP_LPJ_G0017493.1 mouse_genomes_project 10 84148341 84149525 - Nfyb protein_coding retained_intron MGP_LPJ_T0026509.1 MGP_LPJ_G0017493.1 mouse_genomes_project 10 84149031 84150414 - Nfyb protein_coding retained_intron MGP_LPJ_T0026510.1 MGP_LPJ_G0017493.1 mouse_genomes_project 10 84150279 84161528 - Nfyb protein_coding processed_transcript MGP_LPJ_T0026511.1 MGP_LPJ_G0017493.1 mouse_genomes_project 10 84150381 84161511 - MGP_LPJ_P0026511 Nfyb protein_coding protein_coding MGP_LPJ_T0026512.1 MGP_LPJ_G0017493.1 mouse_genomes_project 10 84152934 84155175 - Nfyb protein_coding retained_intron MGP_LPJ_T0025795.1 MGP_LPJ_G0017306.1 mouse_genomes_project 10 78028511 78038798 + MGP_LPJ_P0025795 Pofut2 protein_coding protein_coding MGP_LPJ_T0025866.1 MGP_LPJ_G0017327.1 mouse_genomes_project 10 78842036 78866553 - MGP_LPJ_P0025866 Pfkl protein_coding protein_coding MGP_LPJ_T0025867.1 MGP_LPJ_G0017327.1 mouse_genomes_project 10 78845535 78847249 - Pfkl protein_coding retained_intron MGP_LPJ_T0025868.1 MGP_LPJ_G0017327.1 mouse_genomes_project 10 78853952 78856683 - Pfkl protein_coding retained_intron MGP_LPJ_T0025869.1 MGP_LPJ_G0017327.1 mouse_genomes_project 10 78857428 78866829 - Pfkl protein_coding processed_transcript MGP_LPJ_T0009589.1 MGP_LPJ_G0007707.1 mouse_genomes_project 10 23049711 23049796 + Gm22566 miRNA miRNA MGP_LPJ_T0012425.1 MGP_LPJ_G0010516.1 mouse_genomes_project 10 76675173 76675447 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006114.1 MGP_LPJ_G0005118.1 mouse_genomes_project 10 53351915 53357075 + Gm16998 lincRNA lincRNA MGP_LPJ_T0098367.1 MGP_LPJ_G0036648.1 mouse_genomes_project 10 27069905 27070059 - Gm22811 ribozyme ribozyme MGP_LPJ_T0025091.1 MGP_LPJ_G0017128.1 mouse_genomes_project 10 50764419 50769480 - MGP_LPJ_P0025091 Fam162b protein_coding protein_coding MGP_LPJ_T0027105.1 MGP_LPJ_G0017676.1 mouse_genomes_project 10 121673412 121701757 + MGP_LPJ_P0027105 Mdm1 protein_coding protein_coding MGP_LPJ_T0027106.1 MGP_LPJ_G0017676.1 mouse_genomes_project 10 121673412 121701757 + MGP_LPJ_P0027106 Mdm1 protein_coding protein_coding MGP_LPJ_T0027107.1 MGP_LPJ_G0017676.1 mouse_genomes_project 10 121673412 121701757 + MGP_LPJ_P0027107 Mdm1 protein_coding protein_coding MGP_LPJ_T0027108.1 MGP_LPJ_G0017676.1 mouse_genomes_project 10 121673412 121701757 + MGP_LPJ_P0027108 Mdm1 protein_coding protein_coding MGP_LPJ_T0026310.1 MGP_LPJ_G0017450.1 mouse_genomes_project 10 82292286 82308149 - MGP_LPJ_P0026310 Pias4 protein_coding protein_coding MGP_LPJ_T0026311.1 MGP_LPJ_G0017450.1 mouse_genomes_project 10 82293255 82295145 - Pias4 protein_coding retained_intron MGP_LPJ_T0026312.1 MGP_LPJ_G0017450.1 mouse_genomes_project 10 82294522 82297032 - Pias4 protein_coding retained_intron MGP_LPJ_T0026313.1 MGP_LPJ_G0017450.1 mouse_genomes_project 10 82294692 82307947 - MGP_LPJ_P0026313 Pias4 protein_coding nonsense_mediated_decay MGP_LPJ_T0026314.1 MGP_LPJ_G0017450.1 mouse_genomes_project 10 82294879 82296280 - MGP_LPJ_P0026314 Pias4 protein_coding protein_coding MGP_LPJ_T0026315.1 MGP_LPJ_G0017450.1 mouse_genomes_project 10 82303362 82307940 - Pias4 protein_coding retained_intron MGP_LPJ_T0026940.1 MGP_LPJ_G0017616.1 mouse_genomes_project 10 107889423 107944156 - Tmtc2 protein_coding processed_transcript MGP_LPJ_T0026941.1 MGP_LPJ_G0017616.1 mouse_genomes_project 10 107889423 108305459 - MGP_LPJ_P0026941 Tmtc2 protein_coding protein_coding MGP_LPJ_T0026942.1 MGP_LPJ_G0017616.1 mouse_genomes_project 10 107891264 107944141 - Tmtc2 protein_coding processed_transcript MGP_LPJ_T0026943.1 MGP_LPJ_G0017616.1 mouse_genomes_project 10 107891423 107901481 - Tmtc2 protein_coding processed_transcript MGP_LPJ_T0026944.1 MGP_LPJ_G0017616.1 mouse_genomes_project 10 107983915 108305475 - Tmtc2 protein_coding retained_intron MGP_LPJ_T0026945.1 MGP_LPJ_G0017616.1 mouse_genomes_project 10 108134792 108263405 - Tmtc2 protein_coding processed_transcript MGP_LPJ_T0000863.1 MGP_LPJ_G0000792.1 mouse_genomes_project 10 110246718 110247657 - TEC TEC MGP_LPJ_T0003088.1 MGP_LPJ_G0002883.1 mouse_genomes_project 10 83488830 83514070 + Gm15608 antisense antisense MGP_LPJ_T0003089.1 MGP_LPJ_G0002883.1 mouse_genomes_project 10 83495965 83514051 + Gm15608 antisense antisense MGP_LPJ_T0012399.1 MGP_LPJ_G0010490.1 mouse_genomes_project 10 29875181 29876484 + processed_pseudogene processed_pseudogene MGP_LPJ_T0027230.1 MGP_LPJ_G0017715.1 mouse_genomes_project 10 131202106 131207113 - MGP_LPJ_P0027230 March9 protein_coding protein_coding MGP_LPJ_T0024868.1 MGP_LPJ_G0017063.1 mouse_genomes_project 10 37412996 37458747 + Lama4 protein_coding retained_intron MGP_LPJ_T0024869.1 MGP_LPJ_G0017063.1 mouse_genomes_project 10 37412996 37571765 + MGP_LPJ_P0024869 Lama4 protein_coding protein_coding MGP_LPJ_T0024870.1 MGP_LPJ_G0017063.1 mouse_genomes_project 10 37413034 37500600 + Lama4 protein_coding retained_intron MGP_LPJ_T0024871.1 MGP_LPJ_G0017063.1 mouse_genomes_project 10 37413051 37487469 + Lama4 protein_coding retained_intron MGP_LPJ_T0024872.1 MGP_LPJ_G0017063.1 mouse_genomes_project 10 37413153 37507874 + Lama4 protein_coding retained_intron MGP_LPJ_T0024873.1 MGP_LPJ_G0017063.1 mouse_genomes_project 10 37507159 37511022 + Lama4 protein_coding retained_intron MGP_LPJ_T0024874.1 MGP_LPJ_G0017063.1 mouse_genomes_project 10 37567369 37571674 + Lama4 protein_coding retained_intron MGP_LPJ_T0025481.1 MGP_LPJ_G0017244.1 mouse_genomes_project 10 69482120 69487123 - MGP_LPJ_P0025481 A930033H14Rik protein_coding protein_coding MGP_LPJ_T0024797.1 MGP_LPJ_G0017028.1 mouse_genomes_project 10 27458412 27494816 + MGP_LPJ_P0024797 Echdc1 protein_coding protein_coding MGP_LPJ_T0024798.1 MGP_LPJ_G0017028.1 mouse_genomes_project 10 27458527 27493600 + MGP_LPJ_P0024798 Echdc1 protein_coding protein_coding MGP_LPJ_T0024799.1 MGP_LPJ_G0017028.1 mouse_genomes_project 10 27458746 27495896 + MGP_LPJ_P0024799 Echdc1 protein_coding protein_coding MGP_LPJ_T0024800.1 MGP_LPJ_G0017028.1 mouse_genomes_project 10 27458909 27483850 + Echdc1 protein_coding processed_transcript MGP_LPJ_T0027242.1 MGP_LPJ_G0017719.1 mouse_genomes_project 10 131245474 131274089 - MGP_LPJ_P0027242 Os9 protein_coding protein_coding MGP_LPJ_T0027243.1 MGP_LPJ_G0017719.1 mouse_genomes_project 10 131245474 131274089 - MGP_LPJ_P0027243 Os9 protein_coding protein_coding MGP_LPJ_T0027022.1 MGP_LPJ_G0017649.1 mouse_genomes_project 10 118629556 118652827 - MGP_LPJ_P0027022 Tmem19 protein_coding protein_coding MGP_LPJ_T0025118.1 MGP_LPJ_G0017142.1 mouse_genomes_project 10 52798275 52892228 - MGP_LPJ_P0025118 Mcm9 protein_coding protein_coding MGP_LPJ_T0025119.1 MGP_LPJ_G0017142.1 mouse_genomes_project 10 52799270 52855202 - MGP_LPJ_P0025119 Mcm9 protein_coding unknown_likely_coding MGP_LPJ_T0025958.1 MGP_LPJ_G0017360.1 mouse_genomes_project 10 80633118 80653073 - MGP_LPJ_P0025958 Shc2 protein_coding protein_coding MGP_LPJ_T0025959.1 MGP_LPJ_G0017360.1 mouse_genomes_project 10 80633275 80637949 - Shc2 protein_coding retained_intron MGP_LPJ_T0025960.1 MGP_LPJ_G0017360.1 mouse_genomes_project 10 80635315 80638305 - Shc2 protein_coding retained_intron MGP_LPJ_T0024670.1 MGP_LPJ_G0016977.1 mouse_genomes_project 10 18972450 18991790 + MGP_LPJ_P0024670 Aldh8a1 protein_coding protein_coding MGP_LPJ_T0024671.1 MGP_LPJ_G0016977.1 mouse_genomes_project 10 18972459 18980686 + Aldh8a1 protein_coding retained_intron MGP_LPJ_T0024672.1 MGP_LPJ_G0016977.1 mouse_genomes_project 10 18972506 18984076 + MGP_LPJ_P0024672 Aldh8a1 protein_coding protein_coding MGP_LPJ_T0025314.1 MGP_LPJ_G0017202.1 mouse_genomes_project 10 61608437 61648582 - Col13a1 protein_coding processed_transcript MGP_LPJ_T0025315.1 MGP_LPJ_G0017202.1 mouse_genomes_project 10 61608437 61636605 - MGP_LPJ_P0025315 Col13a1 protein_coding protein_coding MGP_LPJ_T0025316.1 MGP_LPJ_G0017202.1 mouse_genomes_project 10 61608437 61758208 - MGP_LPJ_P0025316 Col13a1 protein_coding protein_coding MGP_LPJ_T0025317.1 MGP_LPJ_G0017202.1 mouse_genomes_project 10 61608437 61758173 - MGP_LPJ_P0025317 Col13a1 protein_coding protein_coding MGP_LPJ_T0025318.1 MGP_LPJ_G0017202.1 mouse_genomes_project 10 61608437 61758173 - MGP_LPJ_P0025318 Col13a1 protein_coding protein_coding MGP_LPJ_T0025319.1 MGP_LPJ_G0017202.1 mouse_genomes_project 10 61618933 61757221 - Col13a1 protein_coding retained_intron MGP_LPJ_T0025320.1 MGP_LPJ_G0017202.1 mouse_genomes_project 10 61619062 61621727 - Col13a1 protein_coding retained_intron MGP_LPJ_T0024629.1 MGP_LPJ_G0016966.1 mouse_genomes_project 10 17386492 17435702 - MGP_LPJ_P0024629 Pex7 protein_coding protein_coding MGP_LPJ_T0024630.1 MGP_LPJ_G0016966.1 mouse_genomes_project 10 17386660 17435687 - MGP_LPJ_P0024630 Pex7 protein_coding protein_coding MGP_LPJ_T0024631.1 MGP_LPJ_G0016966.1 mouse_genomes_project 10 17387352 17396230 - Pex7 protein_coding retained_intron MGP_LPJ_T0024632.1 MGP_LPJ_G0016966.1 mouse_genomes_project 10 17412793 17435558 - MGP_LPJ_P0024632 Pex7 protein_coding protein_coding MGP_LPJ_T0024452.1 MGP_LPJ_G0016917.1 mouse_genomes_project 10 4906140 4944505 + MGP_LPJ_P0024452 Zc3h12d protein_coding protein_coding MGP_LPJ_T0024708.1 MGP_LPJ_G0016989.1 mouse_genomes_project 10 21764095 21780054 + MGP_LPJ_P0024708 Vnn3 protein_coding protein_coding MGP_LPJ_T0025728.1 MGP_LPJ_G0017289.1 mouse_genomes_project 10 76947600 76979036 - MGP_LPJ_P0025728 Prmt2 protein_coding protein_coding MGP_LPJ_T0025729.1 MGP_LPJ_G0017289.1 mouse_genomes_project 10 76947605 76979008 - MGP_LPJ_P0025729 Prmt2 protein_coding protein_coding MGP_LPJ_T0025730.1 MGP_LPJ_G0017289.1 mouse_genomes_project 10 76947610 76979001 - MGP_LPJ_P0025730 Prmt2 protein_coding nonsense_mediated_decay MGP_LPJ_T0025731.1 MGP_LPJ_G0017289.1 mouse_genomes_project 10 76947610 76979007 - MGP_LPJ_P0025731 Prmt2 protein_coding protein_coding MGP_LPJ_T0025732.1 MGP_LPJ_G0017289.1 mouse_genomes_project 10 76948354 76979028 - MGP_LPJ_P0025732 Prmt2 protein_coding nonsense_mediated_decay MGP_LPJ_T0025733.1 MGP_LPJ_G0017289.1 mouse_genomes_project 10 76948796 76951590 - Prmt2 protein_coding retained_intron MGP_LPJ_T0025734.1 MGP_LPJ_G0017289.1 mouse_genomes_project 10 76948822 76952276 - Prmt2 protein_coding processed_transcript MGP_LPJ_T0017059.1 MGP_LPJ_G0015049.1 mouse_genomes_project 10 40207277 40215750 + 5730435O14Rik processed_transcript antisense MGP_LPJ_T0017060.1 MGP_LPJ_G0015049.1 mouse_genomes_project 10 40214845 40215739 + 5730435O14Rik processed_transcript retained_intron MGP_LPJ_T0027075.1 MGP_LPJ_G0017666.1 mouse_genomes_project 10 120481976 120570784 - MGP_LPJ_P0027075 Frs2 protein_coding protein_coding MGP_LPJ_T0024846.1 MGP_LPJ_G0017053.1 mouse_genomes_project 10 32482733 32540827 - MGP_LPJ_P0024846 Dse protein_coding protein_coding MGP_LPJ_T0024794.1 MGP_LPJ_G0017025.1 mouse_genomes_project 10 27288754 27289667 - MGP_LPJ_P0024794 Gm9996 protein_coding protein_coding MGP_LPJ_T0025750.1 MGP_LPJ_G0017296.1 mouse_genomes_project 10 77265176 77269157 + Lss protein_coding processed_transcript MGP_LPJ_T0025751.1 MGP_LPJ_G0017296.1 mouse_genomes_project 10 77265195 77282460 + Lss protein_coding retained_intron MGP_LPJ_T0025752.1 MGP_LPJ_G0017296.1 mouse_genomes_project 10 77265195 77289071 + MGP_LPJ_P0025752 Lss protein_coding protein_coding MGP_LPJ_T0025753.1 MGP_LPJ_G0017296.1 mouse_genomes_project 10 77265200 77290730 + Lss protein_coding retained_intron MGP_LPJ_T0025754.1 MGP_LPJ_G0017296.1 mouse_genomes_project 10 77265270 77269312 + Lss protein_coding retained_intron MGP_LPJ_T0025755.1 MGP_LPJ_G0017296.1 mouse_genomes_project 10 77275473 77276338 + MGP_LPJ_P0025755 Lss protein_coding protein_coding MGP_LPJ_T0025756.1 MGP_LPJ_G0017296.1 mouse_genomes_project 10 77284801 77290210 + Lss protein_coding retained_intron MGP_LPJ_T0025757.1 MGP_LPJ_G0017296.1 mouse_genomes_project 10 77285862 77286825 + Lss protein_coding retained_intron MGP_LPJ_T0024358.1 MGP_LPJ_G0016899.1 mouse_genomes_project 10 2053425 2056209 + MGP_LPJ_P0024358 Gm10097 protein_coding protein_coding MGP_LPJ_T0009607.1 MGP_LPJ_G0007725.1 mouse_genomes_project 10 76947704 76947788 - Mir678 miRNA miRNA MGP_LPJ_T0003068.1 MGP_LPJ_G0002867.1 mouse_genomes_project 10 76807053 76808749 + Gm16222 antisense antisense MGP_LPJ_T0027520.1 MGP_LPJ_G0017829.1 mouse_genomes_project 10 134013617 134014550 - MGP_LPJ_P0027520 Olfr796 protein_coding protein_coding MGP_LPJ_T0027521.1 MGP_LPJ_G0017829.1 mouse_genomes_project 10 134013617 134018166 - MGP_LPJ_P0027521 Olfr796 protein_coding protein_coding MGP_LPJ_T0027079.1 MGP_LPJ_G0017669.1 mouse_genomes_project 10 120681532 120683769 + MGP_LPJ_P0027079 Gm10936 protein_coding protein_coding MGP_LPJ_T0026395.1 MGP_LPJ_G0017471.1 mouse_genomes_project 10 82557396 82593004 - MGP_LPJ_P0026395 Nfic protein_coding protein_coding MGP_LPJ_T0026396.1 MGP_LPJ_G0017471.1 mouse_genomes_project 10 82560312 82592990 - MGP_LPJ_P0026396 Nfic protein_coding protein_coding MGP_LPJ_T0026397.1 MGP_LPJ_G0017471.1 mouse_genomes_project 10 82560312 82592931 - MGP_LPJ_P0026397 Nfic protein_coding protein_coding MGP_LPJ_T0026398.1 MGP_LPJ_G0017471.1 mouse_genomes_project 10 82560349 82561708 - Nfic protein_coding processed_transcript MGP_LPJ_T0026399.1 MGP_LPJ_G0017471.1 mouse_genomes_project 10 82561922 82571793 - MGP_LPJ_P0026399 Nfic protein_coding protein_coding MGP_LPJ_T0026400.1 MGP_LPJ_G0017471.1 mouse_genomes_project 10 82562106 82596848 - MGP_LPJ_P0026400 Nfic protein_coding protein_coding MGP_LPJ_T0006096.1 MGP_LPJ_G0005103.1 mouse_genomes_project 10 11260686 11303565 - Gm26835 lincRNA lincRNA MGP_LPJ_T0025298.1 MGP_LPJ_G0017195.1 mouse_genomes_project 10 61224412 61336179 + MGP_LPJ_P0025298 Lrrc20 protein_coding protein_coding MGP_LPJ_T0009610.1 MGP_LPJ_G0007728.1 mouse_genomes_project 10 79303329 79303400 - Mir6907 miRNA miRNA MGP_LPJ_T0011286.1 MGP_LPJ_G0009404.1 mouse_genomes_project 10 41196365 41196689 - Gm25277 misc_RNA misc_RNA MGP_LPJ_T0026057.1 MGP_LPJ_G0017388.1 mouse_genomes_project 10 81038544 81046231 + MGP_LPJ_P0026057 Cnn2 protein_coding protein_coding MGP_LPJ_T0026058.1 MGP_LPJ_G0017388.1 mouse_genomes_project 10 81038583 81044853 + MGP_LPJ_P0026058 Cnn2 protein_coding protein_coding MGP_LPJ_T0025084.1 MGP_LPJ_G0017124.1 mouse_genomes_project 10 49692609 49980602 + MGP_LPJ_P0025084 Ascc3 protein_coding protein_coding MGP_LPJ_T0009601.1 MGP_LPJ_G0007719.1 mouse_genomes_project 10 60648720 60648842 + Mir466j miRNA miRNA MGP_LPJ_T0025709.1 MGP_LPJ_G0017281.1 mouse_genomes_project 10 76597549 76622254 - MGP_LPJ_P0025709 Smarcb1 protein_coding protein_coding MGP_LPJ_T0025710.1 MGP_LPJ_G0017281.1 mouse_genomes_project 10 76597553 76614583 - Smarcb1 protein_coding retained_intron MGP_LPJ_T0025711.1 MGP_LPJ_G0017281.1 mouse_genomes_project 10 76597555 76617268 - Smarcb1 protein_coding retained_intron MGP_LPJ_T0025712.1 MGP_LPJ_G0017281.1 mouse_genomes_project 10 76597557 76622251 - MGP_LPJ_P0025712 Smarcb1 protein_coding protein_coding MGP_LPJ_T0025713.1 MGP_LPJ_G0017281.1 mouse_genomes_project 10 76598308 76622226 - MGP_LPJ_P0025713 Smarcb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0025714.1 MGP_LPJ_G0017281.1 mouse_genomes_project 10 76610617 76615860 - MGP_LPJ_P0025714 Smarcb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0027189.1 MGP_LPJ_G0017702.1 mouse_genomes_project 10 126537215 126748846 + Ppm1h protein_coding retained_intron MGP_LPJ_T0027190.1 MGP_LPJ_G0017702.1 mouse_genomes_project 10 126537231 126793799 + MGP_LPJ_P0027190 Ppm1h protein_coding protein_coding MGP_LPJ_T0027191.1 MGP_LPJ_G0017702.1 mouse_genomes_project 10 126537235 126821704 + MGP_LPJ_P0027191 Ppm1h protein_coding protein_coding MGP_LPJ_T0027192.1 MGP_LPJ_G0017702.1 mouse_genomes_project 10 126622312 126680363 + Ppm1h protein_coding processed_transcript MGP_LPJ_T0027193.1 MGP_LPJ_G0017702.1 mouse_genomes_project 10 126680135 126684651 + Ppm1h protein_coding retained_intron MGP_LPJ_T0027194.1 MGP_LPJ_G0017702.1 mouse_genomes_project 10 126680293 126817211 + Ppm1h protein_coding retained_intron MGP_LPJ_T0027195.1 MGP_LPJ_G0017702.1 mouse_genomes_project 10 126680338 126756995 + Ppm1h protein_coding processed_transcript MGP_LPJ_T0027196.1 MGP_LPJ_G0017702.1 mouse_genomes_project 10 126766029 126817372 + MGP_LPJ_P0027196 Ppm1h protein_coding protein_coding MGP_LPJ_T0026902.1 MGP_LPJ_G0017606.1 mouse_genomes_project 10 102926450 102970465 - MGP_LPJ_P0026902 Tmtc3 protein_coding protein_coding MGP_LPJ_T0026903.1 MGP_LPJ_G0017606.1 mouse_genomes_project 10 102957892 102970550 - Tmtc3 protein_coding retained_intron MGP_LPJ_T0026904.1 MGP_LPJ_G0017606.1 mouse_genomes_project 10 102959111 102970478 - MGP_LPJ_P0026904 Tmtc3 protein_coding protein_coding MGP_LPJ_T0026905.1 MGP_LPJ_G0017606.1 mouse_genomes_project 10 102960447 102970537 - MGP_LPJ_P0026905 Tmtc3 protein_coding protein_coding MGP_LPJ_T0009652.1 MGP_LPJ_G0007770.1 mouse_genomes_project 10 131140980 131141101 + Mir546 miRNA miRNA MGP_LPJ_T0100062.1 MGP_LPJ_G0038325.1 mouse_genomes_project 10 21690804 21690933 - Snora33 snoRNA snoRNA MGP_LPJ_T0009618.1 MGP_LPJ_G0007736.1 mouse_genomes_project 10 81710082 81710152 + Mir6912 miRNA miRNA MGP_LPJ_T0025300.1 MGP_LPJ_G0017197.1 mouse_genomes_project 10 61402453 61431540 + MGP_LPJ_P0025300 Ppa1 protein_coding protein_coding MGP_LPJ_T0025301.1 MGP_LPJ_G0017197.1 mouse_genomes_project 10 61402522 61406711 + Ppa1 protein_coding retained_intron MGP_LPJ_T0025302.1 MGP_LPJ_G0017197.1 mouse_genomes_project 10 61418262 61421000 + Ppa1 protein_coding processed_transcript MGP_LPJ_T0025303.1 MGP_LPJ_G0017197.1 mouse_genomes_project 10 61419263 61421180 + Ppa1 protein_coding retained_intron MGP_LPJ_T0000849.1 MGP_LPJ_G0000779.1 mouse_genomes_project 10 25731822 25733583 - TEC TEC MGP_LPJ_T0027412.1 MGP_LPJ_G0017774.1 mouse_genomes_project 10 132703544 132711804 + Ankrd52 protein_coding retained_intron MGP_LPJ_T0027413.1 MGP_LPJ_G0017774.1 mouse_genomes_project 10 132703548 132720312 + MGP_LPJ_P0027413 Ankrd52 protein_coding protein_coding MGP_LPJ_T0027414.1 MGP_LPJ_G0017774.1 mouse_genomes_project 10 132715592 132735756 + MGP_LPJ_P0027414 Ankrd52 protein_coding protein_coding MGP_LPJ_T0026562.1 MGP_LPJ_G0017511.1 mouse_genomes_project 10 86653497 86662088 - MGP_LPJ_P0026562 Mterf2 protein_coding protein_coding MGP_LPJ_T0025110.1 MGP_LPJ_G0017137.1 mouse_genomes_project 10 51624999 51636911 + MGP_LPJ_P0025110 Nepn protein_coding protein_coding MGP_LPJ_T0025111.1 MGP_LPJ_G0017137.1 mouse_genomes_project 10 51627615 51640562 + MGP_LPJ_P0025111 Nepn protein_coding protein_coding MGP_LPJ_T0025695.1 MGP_LPJ_G0017274.1 mouse_genomes_project 10 76461692 76472539 - MGP_LPJ_P0025695 Gm20441 protein_coding protein_coding MGP_LPJ_T0026378.1 MGP_LPJ_G0017468.1 mouse_genomes_project 10 82527652 82539947 - MGP_LPJ_P0026378 Fzr1 protein_coding protein_coding MGP_LPJ_T0026379.1 MGP_LPJ_G0017468.1 mouse_genomes_project 10 82528528 82539882 - MGP_LPJ_P0026379 Fzr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0026380.1 MGP_LPJ_G0017468.1 mouse_genomes_project 10 82528802 82539894 - Fzr1 protein_coding retained_intron MGP_LPJ_T0026381.1 MGP_LPJ_G0017468.1 mouse_genomes_project 10 82528939 82532844 - MGP_LPJ_P0026381 Fzr1 protein_coding protein_coding MGP_LPJ_T0026382.1 MGP_LPJ_G0017468.1 mouse_genomes_project 10 82529706 82530972 - Fzr1 protein_coding retained_intron MGP_LPJ_T0026383.1 MGP_LPJ_G0017468.1 mouse_genomes_project 10 82536793 82539811 - Fzr1 protein_coding processed_transcript MGP_LPJ_T0026935.1 MGP_LPJ_G0017614.1 mouse_genomes_project 10 105687151 105879141 - MGP_LPJ_P0026935 Lrriq1 protein_coding unknown_likely_coding MGP_LPJ_T0026936.1 MGP_LPJ_G0017614.1 mouse_genomes_project 10 105707061 105881310 - MGP_LPJ_P0026936 Lrriq1 protein_coding protein_coding MGP_LPJ_T0026937.1 MGP_LPJ_G0017614.1 mouse_genomes_project 10 105859375 105881310 - MGP_LPJ_P0026937 Lrriq1 protein_coding protein_coding MGP_LPJ_T0026938.1 MGP_LPJ_G0017614.1 mouse_genomes_project 10 105860305 105881281 - MGP_LPJ_P0026938 Lrriq1 protein_coding protein_coding MGP_LPJ_T0006146.1 MGP_LPJ_G0005143.1 mouse_genomes_project 10 91522668 91539481 + 1500026H17Rik lincRNA lincRNA MGP_LPJ_T0027023.1 MGP_LPJ_G0017650.1 mouse_genomes_project 10 118661167 118675868 - MGP_LPJ_P0027023 Thap2 protein_coding protein_coding MGP_LPJ_T0003050.1 MGP_LPJ_G0002852.1 mouse_genomes_project 10 41914258 41915680 + Gm29245 antisense antisense MGP_LPJ_T0027155.1 MGP_LPJ_G0017688.1 mouse_genomes_project 10 124499904 124514959 + MGP_LPJ_P0027155 4921513I03Rik protein_coding protein_coding MGP_LPJ_T0024709.1 MGP_LPJ_G0016990.1 mouse_genomes_project 10 21804369 21822941 + MGP_LPJ_P0024709 Vnn1 protein_coding protein_coding MGP_LPJ_T0024845.1 MGP_LPJ_G0017052.1 mouse_genomes_project 10 32455458 32457362 - MGP_LPJ_P0024845 Fam26f protein_coding protein_coding MGP_LPJ_T0024453.1 MGP_LPJ_G0016918.1 mouse_genomes_project 10 4975525 5031802 - MGP_LPJ_P0024453 Tab2 protein_coding protein_coding MGP_LPJ_T0024454.1 MGP_LPJ_G0016918.1 mouse_genomes_project 10 4977201 4980373 - Tab2 protein_coding retained_intron MGP_LPJ_T0024455.1 MGP_LPJ_G0016918.1 mouse_genomes_project 10 4977311 4981359 - Tab2 protein_coding retained_intron MGP_LPJ_T0024456.1 MGP_LPJ_G0016918.1 mouse_genomes_project 10 4981364 5006351 - MGP_LPJ_P0024456 Tab2 protein_coding protein_coding MGP_LPJ_T0024457.1 MGP_LPJ_G0016918.1 mouse_genomes_project 10 4989211 4997403 - MGP_LPJ_P0024457 Tab2 protein_coding protein_coding MGP_LPJ_T0098867.1 MGP_LPJ_G0037130.1 mouse_genomes_project 10 106920610 106920672 - Gm22339 snRNA snRNA MGP_LPJ_T0098854.1 MGP_LPJ_G0037117.1 mouse_genomes_project 10 81565192 81565296 + Gm25044 snRNA snRNA MGP_LPJ_T0098102.1 MGP_LPJ_G0036383.1 mouse_genomes_project 10 24412955 24413055 + Gm23757 rRNA rRNA MGP_LPJ_T0025838.1 MGP_LPJ_G0017315.1 mouse_genomes_project 10 78517512 78518065 + MGP_LPJ_P0025838 Gm10024 protein_coding protein_coding MGP_LPJ_T0012420.1 MGP_LPJ_G0010511.1 mouse_genomes_project 10 73744772 73745844 + processed_pseudogene processed_pseudogene MGP_LPJ_T0026603.1 MGP_LPJ_G0017524.1 mouse_genomes_project 10 88175388 88176848 - MGP_LPJ_P0026603 Gm6729 protein_coding protein_coding MGP_LPJ_T0006148.1 MGP_LPJ_G0005145.1 mouse_genomes_project 10 94022177 94058286 - Rmst lincRNA lincRNA MGP_LPJ_T0006149.1 MGP_LPJ_G0005145.1 mouse_genomes_project 10 94022183 94022858 - Rmst lincRNA lincRNA MGP_LPJ_T0006150.1 MGP_LPJ_G0005145.1 mouse_genomes_project 10 94022271 94058139 - Rmst lincRNA lincRNA MGP_LPJ_T0006151.1 MGP_LPJ_G0005145.1 mouse_genomes_project 10 94026893 94027400 - Rmst lincRNA lincRNA MGP_LPJ_T0006152.1 MGP_LPJ_G0005145.1 mouse_genomes_project 10 94036140 94117590 - Rmst lincRNA lincRNA MGP_LPJ_T0006153.1 MGP_LPJ_G0005145.1 mouse_genomes_project 10 94036140 94118025 - Rmst lincRNA lincRNA MGP_LPJ_T0006154.1 MGP_LPJ_G0005145.1 mouse_genomes_project 10 94038283 94117508 - Rmst lincRNA lincRNA MGP_LPJ_T0006155.1 MGP_LPJ_G0005145.1 mouse_genomes_project 10 94087395 94118022 - Rmst lincRNA lincRNA MGP_LPJ_T0006156.1 MGP_LPJ_G0005145.1 mouse_genomes_project 10 94089098 94090358 - Rmst lincRNA lincRNA MGP_LPJ_T0006157.1 MGP_LPJ_G0005145.1 mouse_genomes_project 10 94089118 94116005 - Rmst lincRNA lincRNA MGP_LPJ_T0006158.1 MGP_LPJ_G0005145.1 mouse_genomes_project 10 94089144 94117799 - Rmst lincRNA lincRNA MGP_LPJ_T0006160.1 MGP_LPJ_G0005145.1 mouse_genomes_project 10 94114965 94115025 - Rmst lincRNA misc_RNA MGP_LPJ_T0006161.1 MGP_LPJ_G0005145.1 mouse_genomes_project 10 94114965 94115623 - Rmst lincRNA lincRNA MGP_LPJ_T0006162.1 MGP_LPJ_G0005145.1 mouse_genomes_project 10 94115008 94118025 - Rmst lincRNA lincRNA MGP_LPJ_T0024702.1 MGP_LPJ_G0016988.1 mouse_genomes_project 10 21704095 21739738 + MGP_LPJ_P0024702 Slc18b1 protein_coding protein_coding MGP_LPJ_T0024703.1 MGP_LPJ_G0016988.1 mouse_genomes_project 10 21704095 21739738 + MGP_LPJ_P0024703 Slc18b1 protein_coding protein_coding MGP_LPJ_T0024704.1 MGP_LPJ_G0016988.1 mouse_genomes_project 10 21704161 21714158 + MGP_LPJ_P0024704 Slc18b1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024705.1 MGP_LPJ_G0016988.1 mouse_genomes_project 10 21704309 21714110 + MGP_LPJ_P0024705 Slc18b1 protein_coding protein_coding MGP_LPJ_T0024706.1 MGP_LPJ_G0016988.1 mouse_genomes_project 10 21714174 21727502 + MGP_LPJ_P0024706 Slc18b1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024707.1 MGP_LPJ_G0016988.1 mouse_genomes_project 10 21734926 21737522 + Slc18b1 protein_coding retained_intron MGP_LPJ_T0024633.1 MGP_LPJ_G0016967.1 mouse_genomes_project 10 17472799 17677459 + MGP_LPJ_P0024633 Map3k5 protein_coding protein_coding MGP_LPJ_T0024634.1 MGP_LPJ_G0016967.1 mouse_genomes_project 10 17472853 17676375 + MGP_LPJ_P0024634 Map3k5 protein_coding protein_coding MGP_LPJ_T0024635.1 MGP_LPJ_G0016967.1 mouse_genomes_project 10 17473546 17634252 + MGP_LPJ_P0024635 Map3k5 protein_coding protein_coding MGP_LPJ_T0024636.1 MGP_LPJ_G0016967.1 mouse_genomes_project 10 17491036 17558436 + MGP_LPJ_P0024636 Map3k5 protein_coding protein_coding MGP_LPJ_T0024637.1 MGP_LPJ_G0016967.1 mouse_genomes_project 10 17633618 17639520 + Map3k5 protein_coding processed_transcript MGP_LPJ_T0024638.1 MGP_LPJ_G0016967.1 mouse_genomes_project 10 17659823 17662708 + Map3k5 protein_coding retained_intron MGP_LPJ_T0024639.1 MGP_LPJ_G0016967.1 mouse_genomes_project 10 17662707 17673258 + Map3k5 protein_coding retained_intron MGP_LPJ_T0100083.1 MGP_LPJ_G0038346.1 mouse_genomes_project 10 62608901 62608966 - Snord98 snoRNA snoRNA MGP_LPJ_T0025810.1 MGP_LPJ_G0017309.1 mouse_genomes_project 10 78326702 78363633 + MGP_LPJ_P0025810 Itgb2 protein_coding protein_coding MGP_LPJ_T0025811.1 MGP_LPJ_G0017309.1 mouse_genomes_project 10 78326797 78345162 + MGP_LPJ_P0025811 Itgb2 protein_coding protein_coding MGP_LPJ_T0025812.1 MGP_LPJ_G0017309.1 mouse_genomes_project 10 78326820 78346639 + MGP_LPJ_P0025812 Itgb2 protein_coding protein_coding MGP_LPJ_T0025813.1 MGP_LPJ_G0017309.1 mouse_genomes_project 10 78326824 78363569 + MGP_LPJ_P0025813 Itgb2 protein_coding nonsense_mediated_decay MGP_LPJ_T0025814.1 MGP_LPJ_G0017309.1 mouse_genomes_project 10 78326830 78363655 + MGP_LPJ_P0025814 Itgb2 protein_coding nonsense_mediated_decay MGP_LPJ_T0006089.1 MGP_LPJ_G0005098.1 mouse_genomes_project 10 5968939 5971261 + Gm26674 lincRNA lincRNA MGP_LPJ_T0027077.1 MGP_LPJ_G0017668.1 mouse_genomes_project 10 120665015 120671434 - MGP_LPJ_P0027077 9530003J23Rik protein_coding protein_coding MGP_LPJ_T0027078.1 MGP_LPJ_G0017668.1 mouse_genomes_project 10 120666539 120671483 - MGP_LPJ_P0027078 9530003J23Rik protein_coding protein_coding MGP_LPJ_T0011291.1 MGP_LPJ_G0009409.1 mouse_genomes_project 10 79255039 79255347 - Gm22514 misc_RNA misc_RNA MGP_LPJ_T0026880.1 MGP_LPJ_G0017593.1 mouse_genomes_project 10 99976885 100013626 + MGP_LPJ_P0026880 Epyc protein_coding protein_coding MGP_LPJ_T0026881.1 MGP_LPJ_G0017593.1 mouse_genomes_project 10 99979906 100014180 + MGP_LPJ_P0026881 Epyc protein_coding protein_coding MGP_LPJ_T0027231.1 MGP_LPJ_G0017716.1 mouse_genomes_project 10 131210461 131214670 + MGP_LPJ_P0027231 Cdk4 protein_coding protein_coding MGP_LPJ_T0027232.1 MGP_LPJ_G0017716.1 mouse_genomes_project 10 131210530 131213164 + MGP_LPJ_P0027232 Cdk4 protein_coding protein_coding MGP_LPJ_T0027233.1 MGP_LPJ_G0017716.1 mouse_genomes_project 10 131210531 131213105 + MGP_LPJ_P0027233 Cdk4 protein_coding protein_coding MGP_LPJ_T0027234.1 MGP_LPJ_G0017716.1 mouse_genomes_project 10 131210536 131213164 + MGP_LPJ_P0027234 Cdk4 protein_coding nonsense_mediated_decay MGP_LPJ_T0027235.1 MGP_LPJ_G0017716.1 mouse_genomes_project 10 131210541 131214045 + Cdk4 protein_coding retained_intron MGP_LPJ_T0027236.1 MGP_LPJ_G0017716.1 mouse_genomes_project 10 131210543 131212208 + Cdk4 protein_coding retained_intron MGP_LPJ_T0027237.1 MGP_LPJ_G0017716.1 mouse_genomes_project 10 131210795 131213159 + MGP_LPJ_P0027237 Cdk4 protein_coding protein_coding MGP_LPJ_T0027238.1 MGP_LPJ_G0017716.1 mouse_genomes_project 10 131211163 131214231 + MGP_LPJ_P0027238 Cdk4 protein_coding unknown_likely_coding MGP_LPJ_T0027239.1 MGP_LPJ_G0017716.1 mouse_genomes_project 10 131211225 131212243 + Cdk4 protein_coding retained_intron MGP_LPJ_T0025292.1 MGP_LPJ_G0017190.1 mouse_genomes_project 10 61031293 61037620 + MGP_LPJ_P0025292 Prf1 protein_coding protein_coding MGP_LPJ_T0025894.1 MGP_LPJ_G0017330.1 mouse_genomes_project 10 78937505 78947680 + MGP_LPJ_P0025894 Icosl protein_coding protein_coding MGP_LPJ_T0003125.1 MGP_LPJ_G0002908.1 mouse_genomes_project 10 131792175 131793498 + Gm16217 antisense antisense MGP_LPJ_T0011294.1 MGP_LPJ_G0009412.1 mouse_genomes_project 10 94027261 94027423 - Gm27608 misc_RNA misc_RNA MGP_LPJ_T0003037.1 MGP_LPJ_G0002843.1 mouse_genomes_project 10 23553895 23679804 + Gm29571 antisense antisense MGP_LPJ_T0003054.1 MGP_LPJ_G0002856.1 mouse_genomes_project 10 60619694 60629797 + Gm26947 antisense antisense MGP_LPJ_T0024537.1 MGP_LPJ_G0016938.1 mouse_genomes_project 10 10768032 10769670 + MGP_LPJ_P0024537 Fuca2 protein_coding protein_coding MGP_LPJ_T0024538.1 MGP_LPJ_G0016938.1 mouse_genomes_project 10 10768036 10775242 + MGP_LPJ_P0024538 Fuca2 protein_coding protein_coding MGP_LPJ_T0024539.1 MGP_LPJ_G0016938.1 mouse_genomes_project 10 10769493 10784905 + MGP_LPJ_P0024539 Fuca2 protein_coding protein_coding MGP_LPJ_T0024540.1 MGP_LPJ_G0016938.1 mouse_genomes_project 10 10769493 10788399 + MGP_LPJ_P0024540 Fuca2 protein_coding protein_coding MGP_LPJ_T0024541.1 MGP_LPJ_G0016938.1 mouse_genomes_project 10 10769576 10782460 + Fuca2 protein_coding retained_intron MGP_LPJ_T0024542.1 MGP_LPJ_G0016938.1 mouse_genomes_project 10 10775398 10784860 + Fuca2 protein_coding processed_transcript MGP_LPJ_T0027360.1 MGP_LPJ_G0017758.1 mouse_genomes_project 10 132348627 132368498 + MGP_LPJ_P0027360 Ptges3 protein_coding protein_coding MGP_LPJ_T0027361.1 MGP_LPJ_G0017758.1 mouse_genomes_project 10 132348684 132368205 + MGP_LPJ_P0027361 Ptges3 protein_coding protein_coding MGP_LPJ_T0027362.1 MGP_LPJ_G0017758.1 mouse_genomes_project 10 132360057 132363161 + Ptges3 protein_coding retained_intron MGP_LPJ_T0024643.1 MGP_LPJ_G0016969.1 mouse_genomes_project 10 17854604 17856393 - MGP_LPJ_P0024643 4933406P04Rik protein_coding protein_coding MGP_LPJ_T0009591.1 MGP_LPJ_G0007709.1 mouse_genomes_project 10 40324504 40324559 + Mir3473b miRNA miRNA MGP_LPJ_T0027299.1 MGP_LPJ_G0017735.1 mouse_genomes_project 10 131692287 131699425 + MGP_LPJ_P0027299 Stac3 protein_coding protein_coding MGP_LPJ_T0027300.1 MGP_LPJ_G0017735.1 mouse_genomes_project 10 131692295 131693440 + MGP_LPJ_P0027300 Stac3 protein_coding protein_coding MGP_LPJ_T0027301.1 MGP_LPJ_G0017735.1 mouse_genomes_project 10 131692318 131699417 + MGP_LPJ_P0027301 Stac3 protein_coding protein_coding MGP_LPJ_T0027302.1 MGP_LPJ_G0017735.1 mouse_genomes_project 10 131695092 131698090 + Stac3 protein_coding retained_intron MGP_LPJ_T0027303.1 MGP_LPJ_G0017735.1 mouse_genomes_project 10 131697826 131698594 + Stac3 protein_coding retained_intron MGP_LPJ_T0024579.1 MGP_LPJ_G0016947.1 mouse_genomes_project 10 15168482 15170928 + MGP_LPJ_P0024579 Cited2 protein_coding protein_coding MGP_LPJ_T0024504.1 MGP_LPJ_G0016934.1 mouse_genomes_project 10 10312430 10381079 + MGP_LPJ_P0024504 Plagl1 protein_coding protein_coding MGP_LPJ_T0024505.1 MGP_LPJ_G0016934.1 mouse_genomes_project 10 10342443 10378585 + Plagl1 protein_coding processed_transcript MGP_LPJ_T0024506.1 MGP_LPJ_G0016934.1 mouse_genomes_project 10 10342464 10378740 + Plagl1 protein_coding processed_transcript MGP_LPJ_T0024507.1 MGP_LPJ_G0016934.1 mouse_genomes_project 10 10342540 10378624 + Plagl1 protein_coding processed_transcript MGP_LPJ_T0024508.1 MGP_LPJ_G0016934.1 mouse_genomes_project 10 10342540 10385245 + MGP_LPJ_P0024508 Plagl1 protein_coding protein_coding MGP_LPJ_T0024509.1 MGP_LPJ_G0016934.1 mouse_genomes_project 10 10342584 10367211 + Plagl1 protein_coding processed_transcript MGP_LPJ_T0024510.1 MGP_LPJ_G0016934.1 mouse_genomes_project 10 10342584 10369726 + Plagl1 protein_coding processed_transcript MGP_LPJ_T0024511.1 MGP_LPJ_G0016934.1 mouse_genomes_project 10 10342584 10369785 + Plagl1 protein_coding processed_transcript MGP_LPJ_T0024512.1 MGP_LPJ_G0016934.1 mouse_genomes_project 10 10342584 10369708 + Plagl1 protein_coding processed_transcript MGP_LPJ_T0024513.1 MGP_LPJ_G0016934.1 mouse_genomes_project 10 10342584 10369768 + Plagl1 protein_coding processed_transcript MGP_LPJ_T0024514.1 MGP_LPJ_G0016934.1 mouse_genomes_project 10 10342584 10378705 + Plagl1 protein_coding processed_transcript MGP_LPJ_T0024515.1 MGP_LPJ_G0016934.1 mouse_genomes_project 10 10342584 10361908 + Plagl1 protein_coding processed_transcript MGP_LPJ_T0024516.1 MGP_LPJ_G0016934.1 mouse_genomes_project 10 10342584 10369724 + Plagl1 protein_coding processed_transcript MGP_LPJ_T0024517.1 MGP_LPJ_G0016934.1 mouse_genomes_project 10 10342584 10359381 + Plagl1 protein_coding retained_intron MGP_LPJ_T0024518.1 MGP_LPJ_G0016934.1 mouse_genomes_project 10 10342584 10378642 + Plagl1 protein_coding processed_transcript MGP_LPJ_T0024519.1 MGP_LPJ_G0016934.1 mouse_genomes_project 10 10342584 10378624 + Plagl1 protein_coding processed_transcript MGP_LPJ_T0024520.1 MGP_LPJ_G0016934.1 mouse_genomes_project 10 10342584 10365552 + Plagl1 protein_coding processed_transcript MGP_LPJ_T0024521.1 MGP_LPJ_G0016934.1 mouse_genomes_project 10 10342584 10384706 + MGP_LPJ_P0024521 Plagl1 protein_coding protein_coding MGP_LPJ_T0024522.1 MGP_LPJ_G0016934.1 mouse_genomes_project 10 10342587 10384693 + MGP_LPJ_P0024522 Plagl1 protein_coding protein_coding MGP_LPJ_T0024523.1 MGP_LPJ_G0016934.1 mouse_genomes_project 10 10342593 10366448 + Plagl1 protein_coding retained_intron MGP_LPJ_T0024524.1 MGP_LPJ_G0016934.1 mouse_genomes_project 10 10342626 10365788 + Plagl1 protein_coding retained_intron MGP_LPJ_T0024525.1 MGP_LPJ_G0016934.1 mouse_genomes_project 10 10342626 10365888 + Plagl1 protein_coding retained_intron MGP_LPJ_T0024526.1 MGP_LPJ_G0016934.1 mouse_genomes_project 10 10342765 10378755 + MGP_LPJ_P0024526 Plagl1 protein_coding protein_coding MGP_LPJ_T0024527.1 MGP_LPJ_G0016934.1 mouse_genomes_project 10 10366468 10381066 + MGP_LPJ_P0024527 Plagl1 protein_coding protein_coding MGP_LPJ_T0024528.1 MGP_LPJ_G0016934.1 mouse_genomes_project 10 10369367 10378792 + MGP_LPJ_P0024528 Plagl1 protein_coding protein_coding MGP_LPJ_T0098393.1 MGP_LPJ_G0036674.1 mouse_genomes_project 10 132763851 132763982 + Gm26347 scaRNA scaRNA MGP_LPJ_T0017072.1 MGP_LPJ_G0015055.1 mouse_genomes_project 10 124074254 124093995 + 1700006J14Rik processed_transcript processed_transcript MGP_LPJ_T0017073.1 MGP_LPJ_G0015055.1 mouse_genomes_project 10 124074255 124095498 + 1700006J14Rik processed_transcript processed_transcript MGP_LPJ_T0017074.1 MGP_LPJ_G0015055.1 mouse_genomes_project 10 124074267 124091879 + 1700006J14Rik processed_transcript processed_transcript MGP_LPJ_T0017075.1 MGP_LPJ_G0015055.1 mouse_genomes_project 10 124074307 124094991 + 1700006J14Rik processed_transcript processed_transcript MGP_LPJ_T0003058.1 MGP_LPJ_G0002858.1 mouse_genomes_project 10 62401818 62403194 + 4933428P19Rik antisense antisense MGP_LPJ_T0025934.1 MGP_LPJ_G0017352.1 mouse_genomes_project 10 80289458 80324108 + MGP_LPJ_P0025934 Vmn2r81 protein_coding protein_coding MGP_LPJ_T0006110.1 MGP_LPJ_G0005114.1 mouse_genomes_project 10 38363929 38365403 - Gm26824 lincRNA lincRNA MGP_LPJ_T0026515.1 MGP_LPJ_G0017496.1 mouse_genomes_project 10 84402228 84618076 + MGP_LPJ_P0026515 Chst11 protein_coding protein_coding MGP_LPJ_T0024927.1 MGP_LPJ_G0017078.1 mouse_genomes_project 10 38830387 38842093 - MGP_LPJ_P0024927 Amd1 protein_coding unknown_likely_coding MGP_LPJ_T0024346.1 MGP_LPJ_G0016897.1 mouse_genomes_project 10 1605099 1877924 + Esr1 protein_coding processed_transcript MGP_LPJ_T0024347.1 MGP_LPJ_G0016897.1 mouse_genomes_project 10 1605496 1986935 + MGP_LPJ_P0024347 Esr1 protein_coding protein_coding MGP_LPJ_T0024348.1 MGP_LPJ_G0016897.1 mouse_genomes_project 10 1605503 1664862 + Esr1 protein_coding retained_intron MGP_LPJ_T0024349.1 MGP_LPJ_G0016897.1 mouse_genomes_project 10 1605520 1840210 + Esr1 protein_coding retained_intron MGP_LPJ_T0024350.1 MGP_LPJ_G0016897.1 mouse_genomes_project 10 1605528 1985082 + MGP_LPJ_P0024350 Esr1 protein_coding protein_coding MGP_LPJ_T0024351.1 MGP_LPJ_G0016897.1 mouse_genomes_project 10 1703525 1983338 + MGP_LPJ_P0024351 Esr1 protein_coding protein_coding MGP_LPJ_T0024352.1 MGP_LPJ_G0016897.1 mouse_genomes_project 10 1703525 1940281 + MGP_LPJ_P0024352 Esr1 protein_coding protein_coding MGP_LPJ_T0024353.1 MGP_LPJ_G0016897.1 mouse_genomes_project 10 1706021 1771451 + Esr1 protein_coding processed_transcript MGP_LPJ_T0024354.1 MGP_LPJ_G0016897.1 mouse_genomes_project 10 1898131 1979244 + Esr1 protein_coding processed_transcript MGP_LPJ_T0024355.1 MGP_LPJ_G0016897.1 mouse_genomes_project 10 1912032 1982970 + Esr1 protein_coding processed_transcript MGP_LPJ_T0100114.1 MGP_LPJ_G0038377.1 mouse_genomes_project 10 133694122 133694256 + Gm25764 snoRNA snoRNA MGP_LPJ_T0100100.1 MGP_LPJ_G0038363.1 mouse_genomes_project 10 108805559 108805681 - Gm25342 snoRNA snoRNA MGP_LPJ_T0026578.1 MGP_LPJ_G0017517.1 mouse_genomes_project 10 87507142 87533164 - MGP_LPJ_P0026578 Prdm4 protein_coding unknown_likely_coding MGP_LPJ_T0026579.1 MGP_LPJ_G0017517.1 mouse_genomes_project 10 87507142 87533060 - MGP_LPJ_P0026579 Prdm4 protein_coding unknown_likely_coding MGP_LPJ_T0026580.1 MGP_LPJ_G0017517.1 mouse_genomes_project 10 87507151 87533172 - MGP_LPJ_P0026580 Prdm4 protein_coding protein_coding MGP_LPJ_T0025250.1 MGP_LPJ_G0017182.1 mouse_genomes_project 10 59970374 60000632 + MGP_LPJ_P0025250 Vsir protein_coding protein_coding MGP_LPJ_T0025251.1 MGP_LPJ_G0017182.1 mouse_genomes_project 10 59970428 59984875 + Vsir protein_coding processed_transcript MGP_LPJ_T0025252.1 MGP_LPJ_G0017182.1 mouse_genomes_project 10 59970430 59984657 + Vsir protein_coding processed_transcript MGP_LPJ_T0025253.1 MGP_LPJ_G0017182.1 mouse_genomes_project 10 59970507 59986987 + Vsir protein_coding retained_intron MGP_LPJ_T0025254.1 MGP_LPJ_G0017182.1 mouse_genomes_project 10 59970535 59995716 + MGP_LPJ_P0025254 Vsir protein_coding protein_coding MGP_LPJ_T0025255.1 MGP_LPJ_G0017182.1 mouse_genomes_project 10 59970545 59996887 + MGP_LPJ_P0025255 Vsir protein_coding protein_coding MGP_LPJ_T0011304.1 MGP_LPJ_G0009422.1 mouse_genomes_project 10 118541713 118542019 - Gm22794 misc_RNA misc_RNA MGP_LPJ_T0024979.1 MGP_LPJ_G0017094.1 mouse_genomes_project 10 40266333 40294416 - MGP_LPJ_P0024979 protein_coding protein_coding MGP_LPJ_T0025043.1 MGP_LPJ_G0017109.1 mouse_genomes_project 10 42259022 42297603 + MGP_LPJ_P0025043 Bend3 protein_coding protein_coding MGP_LPJ_T0027549.1 MGP_LPJ_G0017847.1 mouse_genomes_project 10 134375051 134375984 - MGP_LPJ_P0027549 Olfr815 protein_coding protein_coding MGP_LPJ_T0026666.1 MGP_LPJ_G0017541.1 mouse_genomes_project 10 90208328 90235553 - MGP_LPJ_P0026666 Chpt1 protein_coding protein_coding MGP_LPJ_T0026667.1 MGP_LPJ_G0017541.1 mouse_genomes_project 10 90208587 90244151 - MGP_LPJ_P0026667 Chpt1 protein_coding protein_coding MGP_LPJ_T0026671.1 MGP_LPJ_G0017541.1 mouse_genomes_project 10 90224651 90268254 - MGP_LPJ_P0026671 Chpt1 protein_coding protein_coding MGP_LPJ_T0026672.1 MGP_LPJ_G0017541.1 mouse_genomes_project 10 90231530 90268180 - MGP_LPJ_P0026672 Chpt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0026673.1 MGP_LPJ_G0017541.1 mouse_genomes_project 10 90231928 90268151 - MGP_LPJ_P0026673 Chpt1 protein_coding protein_coding MGP_LPJ_T0026674.1 MGP_LPJ_G0017541.1 mouse_genomes_project 10 90231928 90267912 - MGP_LPJ_P0026674 Chpt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0026675.1 MGP_LPJ_G0017541.1 mouse_genomes_project 10 90231950 90268059 - MGP_LPJ_P0026675 Chpt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0026676.1 MGP_LPJ_G0017541.1 mouse_genomes_project 10 90249204 90268088 - MGP_LPJ_P0026676 Chpt1 protein_coding protein_coding MGP_LPJ_T0024314.1 MGP_LPJ_G0016890.1 mouse_genomes_project 10 675196 897144 + Plekhg1 protein_coding retained_intron MGP_LPJ_T0024315.1 MGP_LPJ_G0016890.1 mouse_genomes_project 10 679703 897133 + Plekhg1 protein_coding retained_intron MGP_LPJ_T0024316.1 MGP_LPJ_G0016890.1 mouse_genomes_project 10 818346 928237 + MGP_LPJ_P0024316 Plekhg1 protein_coding protein_coding MGP_LPJ_T0024317.1 MGP_LPJ_G0016890.1 mouse_genomes_project 10 823604 925482 + MGP_LPJ_P0024317 Plekhg1 protein_coding protein_coding MGP_LPJ_T0024318.1 MGP_LPJ_G0016890.1 mouse_genomes_project 10 857614 872249 + Plekhg1 protein_coding retained_intron MGP_LPJ_T0024319.1 MGP_LPJ_G0016890.1 mouse_genomes_project 10 857618 928231 + MGP_LPJ_P0024319 Plekhg1 protein_coding protein_coding MGP_LPJ_T0024320.1 MGP_LPJ_G0016890.1 mouse_genomes_project 10 918874 924459 + MGP_LPJ_P0024320 Plekhg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0024933.1 MGP_LPJ_G0017082.1 mouse_genomes_project 10 39272441 39407240 + MGP_LPJ_P0024933 Mettl24 protein_coding protein_coding MGP_LPJ_T0012378.1 MGP_LPJ_G0010469.1 mouse_genomes_project 10 820207 820516 - processed_pseudogene processed_pseudogene MGP_LPJ_T0024773.1 MGP_LPJ_G0017021.1 mouse_genomes_project 10 25071274 25079948 - Lama2 protein_coding retained_intron MGP_LPJ_T0024774.1 MGP_LPJ_G0017021.1 mouse_genomes_project 10 25072523 25735098 - MGP_LPJ_P0024774 Lama2 protein_coding protein_coding MGP_LPJ_T0024775.1 MGP_LPJ_G0017021.1 mouse_genomes_project 10 25072867 25589169 - MGP_LPJ_P0024775 Lama2 protein_coding unknown_likely_coding MGP_LPJ_T0024776.1 MGP_LPJ_G0017021.1 mouse_genomes_project 10 25291897 25735051 - MGP_LPJ_P0024776 Lama2 protein_coding protein_coding MGP_LPJ_T0024777.1 MGP_LPJ_G0017021.1 mouse_genomes_project 10 25370697 25735197 - Lama2 protein_coding retained_intron MGP_LPJ_T0024778.1 MGP_LPJ_G0017021.1 mouse_genomes_project 10 25463120 25735121 - Lama2 protein_coding retained_intron MGP_LPJ_T0024779.1 MGP_LPJ_G0017021.1 mouse_genomes_project 10 25534081 25738013 - Lama2 protein_coding retained_intron MGP_LPJ_T0024780.1 MGP_LPJ_G0017021.1 mouse_genomes_project 10 25586396 25735121 - Lama2 protein_coding processed_transcript MGP_LPJ_T0025749.1 MGP_LPJ_G0017295.1 mouse_genomes_project 10 77209270 77255615 + MGP_LPJ_P0025749 Mcm3ap protein_coding protein_coding MGP_LPJ_T0025187.1 MGP_LPJ_G0017166.1 mouse_genomes_project 10 58697062 58757469 - MGP_LPJ_P0025187 Sept10 protein_coding protein_coding MGP_LPJ_T0098878.1 MGP_LPJ_G0037141.1 mouse_genomes_project 10 131588868 131588977 - Gm23819 snRNA snRNA MGP_LPJ_T0026795.1 MGP_LPJ_G0017564.1 mouse_genomes_project 10 95492693 95527914 + MGP_LPJ_P0026795 Lta4h protein_coding protein_coding MGP_LPJ_T0006091.1 MGP_LPJ_G0005100.1 mouse_genomes_project 10 7123986 7294820 + Gm28905 lincRNA lincRNA MGP_LPJ_T0009611.1 MGP_LPJ_G0007729.1 mouse_genomes_project 10 79332075 79332179 + Mir6410 miRNA miRNA MGP_LPJ_T0025923.1 MGP_LPJ_G0017346.1 mouse_genomes_project 10 79839231 79921684 + MGP_LPJ_P0025923 protein_coding protein_coding MGP_LPJ_T0025924.1 MGP_LPJ_G0017346.1 mouse_genomes_project 10 79839247 79921377 + MGP_LPJ_P0025924 protein_coding protein_coding MGP_LPJ_T0003070.1 MGP_LPJ_G0002869.1 mouse_genomes_project 10 77127265 77139446 + 1700094J05Rik antisense antisense MGP_LPJ_T0003071.1 MGP_LPJ_G0002869.1 mouse_genomes_project 10 77136842 77137210 + 1700094J05Rik antisense antisense MGP_LPJ_T0026668.1 MGP_LPJ_G0017542.1 mouse_genomes_project 10 90214715 90232347 + MGP_LPJ_P0026668 Sycp3 protein_coding protein_coding MGP_LPJ_T0026669.1 MGP_LPJ_G0017542.1 mouse_genomes_project 10 90214810 90232348 + MGP_LPJ_P0026669 Sycp3 protein_coding protein_coding MGP_LPJ_T0026670.1 MGP_LPJ_G0017542.1 mouse_genomes_project 10 90214810 90232348 + MGP_LPJ_P0026670 Sycp3 protein_coding nonsense_mediated_decay MGP_LPJ_T0011287.1 MGP_LPJ_G0009405.1 mouse_genomes_project 10 49997178 49997468 - Gm23883 misc_RNA misc_RNA MGP_LPJ_T0027110.1 MGP_LPJ_G0017678.1 mouse_genomes_project 10 121834071 121837605 - protein_coding retained_intron MGP_LPJ_T0000868.1 MGP_LPJ_G0000797.1 mouse_genomes_project 10 121537230 121537580 + TEC TEC MGP_LPJ_T0025464.1 MGP_LPJ_G0017237.1 mouse_genomes_project 10 67753790 67756014 + MGP_LPJ_P0025464 Gm10797 protein_coding protein_coding MGP_LPJ_T0009631.1 MGP_LPJ_G0007749.1 mouse_genomes_project 10 95469928 95469984 + Mir7688 miRNA miRNA MGP_LPJ_T0026771.1 MGP_LPJ_G0017559.1 mouse_genomes_project 10 93075345 93101123 - MGP_LPJ_P0026771 Tmpo protein_coding protein_coding MGP_LPJ_T0026772.1 MGP_LPJ_G0017559.1 mouse_genomes_project 10 93075345 93101123 - MGP_LPJ_P0026772 Tmpo protein_coding protein_coding MGP_LPJ_T0026773.1 MGP_LPJ_G0017559.1 mouse_genomes_project 10 93075345 93101123 - MGP_LPJ_P0026773 Tmpo protein_coding protein_coding MGP_LPJ_T0026774.1 MGP_LPJ_G0017559.1 mouse_genomes_project 10 93075345 93101123 - MGP_LPJ_P0026774 Tmpo protein_coding protein_coding MGP_LPJ_T0026775.1 MGP_LPJ_G0017559.1 mouse_genomes_project 10 93088191 93101123 - MGP_LPJ_P0026775 Tmpo protein_coding protein_coding MGP_LPJ_T0006105.1 MGP_LPJ_G0005109.1 mouse_genomes_project 10 19441986 19457045 - Platr6 lincRNA lincRNA MGP_LPJ_T0026895.1 MGP_LPJ_G0017601.1 mouse_genomes_project 10 101677812 101682070 + MGP_LPJ_P0026895 Dusp6 protein_coding protein_coding MGP_LPJ_T0024686.1 MGP_LPJ_G0016980.1 mouse_genomes_project 10 19823619 19824196 - MGP_LPJ_P0024686 protein_coding protein_coding MGP_LPJ_T0100110.1 MGP_LPJ_G0038373.1 mouse_genomes_project 10 132229068 132229199 - Gm23996 snoRNA snoRNA MGP_LPJ_T0024717.1 MGP_LPJ_G0016998.1 mouse_genomes_project 10 21923430 21924483 + MGP_LPJ_P0024717 Taar7b protein_coding protein_coding MGP_LPJ_T0027518.1 MGP_LPJ_G0017828.1 mouse_genomes_project 10 133977787 133981745 + MGP_LPJ_P0027518 Olfr794 protein_coding protein_coding MGP_LPJ_T0027519.1 MGP_LPJ_G0017828.1 mouse_genomes_project 10 133980782 133981745 + MGP_LPJ_P0027519 Olfr794 protein_coding protein_coding MGP_LPJ_T0024862.1 MGP_LPJ_G0017060.1 mouse_genomes_project 10 35375990 35405826 + MGP_LPJ_P0024862 Hdac2 protein_coding protein_coding MGP_LPJ_T0024863.1 MGP_LPJ_G0017060.1 mouse_genomes_project 10 35376016 35399361 + MGP_LPJ_P0024863 Hdac2 protein_coding protein_coding MGP_LPJ_T0024864.1 MGP_LPJ_G0017060.1 mouse_genomes_project 10 35393212 35405825 + Hdac2 protein_coding processed_transcript MGP_LPJ_T0024865.1 MGP_LPJ_G0017060.1 mouse_genomes_project 10 35402108 35405548 + Hdac2 protein_coding retained_intron MGP_LPJ_T0025780.1 MGP_LPJ_G0017303.1 mouse_genomes_project 10 77784265 77794393 + MGP_LPJ_P0025780 Slc19a1 protein_coding protein_coding MGP_LPJ_T0025781.1 MGP_LPJ_G0017303.1 mouse_genomes_project 10 77784295 77793879 + MGP_LPJ_P0025781 Slc19a1 protein_coding protein_coding MGP_LPJ_T0025782.1 MGP_LPJ_G0017303.1 mouse_genomes_project 10 77784708 77802464 + MGP_LPJ_P0025782 Slc19a1 protein_coding protein_coding MGP_LPJ_T0025783.1 MGP_LPJ_G0017303.1 mouse_genomes_project 10 77785236 77802463 + MGP_LPJ_P0025783 Slc19a1 protein_coding protein_coding MGP_LPJ_T0025784.1 MGP_LPJ_G0017303.1 mouse_genomes_project 10 77785292 77798300 + MGP_LPJ_P0025784 Slc19a1 protein_coding protein_coding MGP_LPJ_T0025785.1 MGP_LPJ_G0017303.1 mouse_genomes_project 10 77785305 77794988 + MGP_LPJ_P0025785 Slc19a1 protein_coding protein_coding MGP_LPJ_T0025786.1 MGP_LPJ_G0017303.1 mouse_genomes_project 10 77785343 77794362 + MGP_LPJ_P0025786 Slc19a1 protein_coding protein_coding MGP_LPJ_T0025787.1 MGP_LPJ_G0017303.1 mouse_genomes_project 10 77794531 77796930 + Slc19a1 protein_coding retained_intron MGP_LPJ_T0025788.1 MGP_LPJ_G0017303.1 mouse_genomes_project 10 77794822 77813948 + MGP_LPJ_P0025788 Slc19a1 protein_coding protein_coding MGP_LPJ_T0027111.1 MGP_LPJ_G0017679.1 mouse_genomes_project 10 122017311 122022157 + MGP_LPJ_P0027111 Ifng protein_coding protein_coding MGP_LPJ_T0003045.1 MGP_LPJ_G0002848.1 mouse_genomes_project 10 38898028 38899622 - Cdk19os antisense antisense MGP_LPJ_T0003046.1 MGP_LPJ_G0002848.1 mouse_genomes_project 10 38898612 38899622 - Cdk19os antisense antisense MGP_LPJ_T0024626.1 MGP_LPJ_G0016963.1 mouse_genomes_project 10 17175748 17196650 + MGP_LPJ_P0024626 protein_coding protein_coding MGP_LPJ_T0006113.1 MGP_LPJ_G0005117.1 mouse_genomes_project 10 41500800 41502847 - Gm26860 lincRNA lincRNA MGP_LPJ_T0025067.1 MGP_LPJ_G0017121.1 mouse_genomes_project 10 44305531 44403881 - MGP_LPJ_P0025067 Lin28b protein_coding protein_coding MGP_LPJ_T0025068.1 MGP_LPJ_G0017121.1 mouse_genomes_project 10 44309976 44403139 - MGP_LPJ_P0025068 Lin28b protein_coding unknown_likely_coding MGP_LPJ_T0025025.1 MGP_LPJ_G0017105.1 mouse_genomes_project 10 41599871 41705629 + MGP_LPJ_P0025025 Scml4 protein_coding protein_coding MGP_LPJ_T0025026.1 MGP_LPJ_G0017105.1 mouse_genomes_project 10 41600032 41673819 + MGP_LPJ_P0025026 Scml4 protein_coding protein_coding MGP_LPJ_T0025027.1 MGP_LPJ_G0017105.1 mouse_genomes_project 10 41600156 41677422 + MGP_LPJ_P0025027 Scml4 protein_coding protein_coding MGP_LPJ_T0025028.1 MGP_LPJ_G0017105.1 mouse_genomes_project 10 41600282 41705627 + MGP_LPJ_P0025028 Scml4 protein_coding protein_coding MGP_LPJ_T0025029.1 MGP_LPJ_G0017105.1 mouse_genomes_project 10 41605001 41673684 + MGP_LPJ_P0025029 Scml4 protein_coding protein_coding MGP_LPJ_T0025030.1 MGP_LPJ_G0017105.1 mouse_genomes_project 10 41644321 41678198 + MGP_LPJ_P0025030 Scml4 protein_coding protein_coding MGP_LPJ_T0025031.1 MGP_LPJ_G0017105.1 mouse_genomes_project 10 41677398 41703619 + Scml4 protein_coding retained_intron MGP_LPJ_T0025032.1 MGP_LPJ_G0017105.1 mouse_genomes_project 10 41677974 41691192 + Scml4 protein_coding retained_intron MGP_LPJ_T0025033.1 MGP_LPJ_G0017105.1 mouse_genomes_project 10 41682891 41703570 + Scml4 protein_coding processed_transcript MGP_LPJ_T0025012.1 MGP_LPJ_G0017102.1 mouse_genomes_project 10 41276116 41282097 - MGP_LPJ_P0025012 Nr2e1 protein_coding protein_coding MGP_LPJ_T0025013.1 MGP_LPJ_G0017102.1 mouse_genomes_project 10 41276208 41295975 - MGP_LPJ_P0025013 Nr2e1 protein_coding protein_coding MGP_LPJ_T0025014.1 MGP_LPJ_G0017102.1 mouse_genomes_project 10 41284752 41293381 - MGP_LPJ_P0025014 Nr2e1 protein_coding protein_coding MGP_LPJ_T0024801.1 MGP_LPJ_G0017029.1 mouse_genomes_project 10 27493433 27511677 - MGP_LPJ_P0024801 Rnf146 protein_coding protein_coding MGP_LPJ_T0024802.1 MGP_LPJ_G0017029.1 mouse_genomes_project 10 27495426 27511677 - MGP_LPJ_P0024802 Rnf146 protein_coding protein_coding MGP_LPJ_T0024803.1 MGP_LPJ_G0017029.1 mouse_genomes_project 10 27495431 27511275 - MGP_LPJ_P0024803 Rnf146 protein_coding protein_coding MGP_LPJ_T0024804.1 MGP_LPJ_G0017029.1 mouse_genomes_project 10 27495892 27506948 - MGP_LPJ_P0024804 Rnf146 protein_coding protein_coding MGP_LPJ_T0024805.1 MGP_LPJ_G0017029.1 mouse_genomes_project 10 27496453 27511258 - MGP_LPJ_P0024805 Rnf146 protein_coding protein_coding MGP_LPJ_T0027049.1 MGP_LPJ_G0017658.1 mouse_genomes_project 10 119775774 119837160 - MGP_LPJ_P0027049 Kcnmb4 protein_coding protein_coding MGP_LPJ_T0027050.1 MGP_LPJ_G0017658.1 mouse_genomes_project 10 119795245 119836717 - MGP_LPJ_P0027050 Kcnmb4 protein_coding protein_coding MGP_LPJ_T0027051.1 MGP_LPJ_G0017658.1 mouse_genomes_project 10 119824793 119836704 - MGP_LPJ_P0027051 Kcnmb4 protein_coding protein_coding MGP_LPJ_T0025331.1 MGP_LPJ_G0017204.1 mouse_genomes_project 10 61922409 61924083 + MGP_LPJ_P0025331 Neurog3 protein_coding protein_coding MGP_LPJ_T0025690.1 MGP_LPJ_G0017271.1 mouse_genomes_project 10 76317593 76324983 - MGP_LPJ_P0025690 Susd2 protein_coding protein_coding MGP_LPJ_T0025691.1 MGP_LPJ_G0017271.1 mouse_genomes_project 10 76317593 76324983 - MGP_LPJ_P0025691 Susd2 protein_coding protein_coding MGP_LPJ_T0009588.1 MGP_LPJ_G0007706.1 mouse_genomes_project 10 22901465 22901535 + Mir6905 miRNA miRNA MGP_LPJ_T0026487.1 MGP_LPJ_G0017490.1 mouse_genomes_project 10 84010575 84030743 + MGP_LPJ_P0026487 Tdg protein_coding protein_coding MGP_LPJ_T0026488.1 MGP_LPJ_G0017490.1 mouse_genomes_project 10 84010592 84022063 + Tdg protein_coding processed_transcript MGP_LPJ_T0026489.1 MGP_LPJ_G0017490.1 mouse_genomes_project 10 84011380 84024948 + MGP_LPJ_P0026489 Tdg protein_coding protein_coding MGP_LPJ_T0026490.1 MGP_LPJ_G0017490.1 mouse_genomes_project 10 84021893 84024964 + Tdg protein_coding retained_intron MGP_LPJ_T0026491.1 MGP_LPJ_G0017490.1 mouse_genomes_project 10 84022181 84029546 + MGP_LPJ_P0026491 Tdg protein_coding protein_coding MGP_LPJ_T0026492.1 MGP_LPJ_G0017490.1 mouse_genomes_project 10 84024682 84026050 + Tdg protein_coding retained_intron MGP_LPJ_T0026493.1 MGP_LPJ_G0017490.1 mouse_genomes_project 10 84025096 84029065 + Tdg protein_coding retained_intron MGP_LPJ_T0026494.1 MGP_LPJ_G0017490.1 mouse_genomes_project 10 84028367 84029716 + Tdg protein_coding retained_intron MGP_LPJ_T0026025.1 MGP_LPJ_G0017377.1 mouse_genomes_project 10 80909846 80918447 + Prtn3 protein_coding processed_transcript MGP_LPJ_T0026026.1 MGP_LPJ_G0017377.1 mouse_genomes_project 10 80914984 80918580 + MGP_LPJ_P0026026 Prtn3 protein_coding protein_coding MGP_LPJ_T0026027.1 MGP_LPJ_G0017377.1 mouse_genomes_project 10 80916385 80918580 + Prtn3 protein_coding retained_intron MGP_LPJ_T0026028.1 MGP_LPJ_G0017377.1 mouse_genomes_project 10 80916409 80917795 + Prtn3 protein_coding retained_intron MGP_LPJ_T0026029.1 MGP_LPJ_G0017377.1 mouse_genomes_project 10 80916447 80918250 + MGP_LPJ_P0026029 Prtn3 protein_coding protein_coding MGP_LPJ_T0026030.1 MGP_LPJ_G0017377.1 mouse_genomes_project 10 80917188 80918286 + Prtn3 protein_coding retained_intron MGP_LPJ_T0025937.1 MGP_LPJ_G0017355.1 mouse_genomes_project 10 80472192 80497389 + MGP_LPJ_P0025937 Vmn2r83 protein_coding protein_coding MGP_LPJ_T0025066.1 MGP_LPJ_G0017120.1 mouse_genomes_project 10 44263779 44298620 + MGP_LPJ_P0025066 Bves protein_coding protein_coding MGP_LPJ_T0026844.1 MGP_LPJ_G0017576.1 mouse_genomes_project 10 96272495 96302615 + MGP_LPJ_P0026844 Ndufa12 protein_coding protein_coding MGP_LPJ_T0026845.1 MGP_LPJ_G0017576.1 mouse_genomes_project 10 96272499 96276973 + Ndufa12 protein_coding retained_intron MGP_LPJ_T0026846.1 MGP_LPJ_G0017576.1 mouse_genomes_project 10 96273506 96301915 + MGP_LPJ_P0026846 Ndufa12 protein_coding nonsense_mediated_decay MGP_LPJ_T0101745.1 MGP_LPJ_G0039783.1 mouse_genomes_project 10 79416755 79417693 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0017038.1 MGP_LPJ_G0015045.1 mouse_genomes_project 10 18073258 18076097 - 4930403O15Rik processed_transcript processed_transcript MGP_LPJ_T0015949.1 MGP_LPJ_G0014040.1 mouse_genomes_project 8 82132904 82133877 - processed_pseudogene processed_pseudogene MGP_LPJ_T0089398.1 MGP_LPJ_G0033756.1 mouse_genomes_project 8 85006642 85019700 - MGP_LPJ_P0089398 Il27ra protein_coding protein_coding MGP_LPJ_T0090014.1 MGP_LPJ_G0033953.1 mouse_genomes_project 8 108011266 108016639 + MGP_LPJ_P0090014 Hsd11b2 protein_coding protein_coding MGP_LPJ_T0011047.1 MGP_LPJ_G0009165.1 mouse_genomes_project 8 126832312 126832381 + Mir7079 miRNA miRNA MGP_LPJ_T0090505.1 MGP_LPJ_G0034119.1 mouse_genomes_project 8 125455253 125483022 - MGP_LPJ_P0090505 Klhdc4 protein_coding protein_coding MGP_LPJ_T0090506.1 MGP_LPJ_G0034119.1 mouse_genomes_project 8 125455259 125483082 - Klhdc4 protein_coding retained_intron MGP_LPJ_T0090507.1 MGP_LPJ_G0034119.1 mouse_genomes_project 8 125455270 125456355 - Klhdc4 protein_coding retained_intron MGP_LPJ_T0090508.1 MGP_LPJ_G0034119.1 mouse_genomes_project 8 125455473 125483022 - MGP_LPJ_P0090508 Klhdc4 protein_coding protein_coding MGP_LPJ_T0090509.1 MGP_LPJ_G0034119.1 mouse_genomes_project 8 125455473 125483022 - MGP_LPJ_P0090509 Klhdc4 protein_coding nonsense_mediated_decay MGP_LPJ_T0090510.1 MGP_LPJ_G0034119.1 mouse_genomes_project 8 125455473 125483022 - MGP_LPJ_P0090510 Klhdc4 protein_coding protein_coding MGP_LPJ_T0090511.1 MGP_LPJ_G0034119.1 mouse_genomes_project 8 125457095 125464197 - Klhdc4 protein_coding processed_transcript MGP_LPJ_T0090512.1 MGP_LPJ_G0034119.1 mouse_genomes_project 8 125458388 125460523 - Klhdc4 protein_coding retained_intron MGP_LPJ_T0090513.1 MGP_LPJ_G0034119.1 mouse_genomes_project 8 125480026 125483051 - Klhdc4 protein_coding retained_intron MGP_LPJ_T0090514.1 MGP_LPJ_G0034119.1 mouse_genomes_project 8 125480320 125483046 - MGP_LPJ_P0090514 Klhdc4 protein_coding nonsense_mediated_decay MGP_LPJ_T0088138.1 MGP_LPJ_G0033368.1 mouse_genomes_project 8 20644262 20664119 - MGP_LPJ_P0088138 Ap3m2 protein_coding unknown_likely_coding MGP_LPJ_T0088769.1 MGP_LPJ_G0033566.1 mouse_genomes_project 8 67715753 67742455 + MGP_LPJ_P0088769 Nat3 protein_coding protein_coding MGP_LPJ_T0015919.1 MGP_LPJ_G0014010.1 mouse_genomes_project 8 32796163 32796550 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099783.1 MGP_LPJ_G0038046.1 mouse_genomes_project 8 100438492 100438618 - Gm23494 snRNA snRNA MGP_LPJ_T0090013.1 MGP_LPJ_G0033952.1 mouse_genomes_project 8 107963377 107987999 - MGP_LPJ_P0090013 Zdhhc1 protein_coding unknown_likely_coding MGP_LPJ_T0101067.1 MGP_LPJ_G0039330.1 mouse_genomes_project 8 130979588 130979722 - Gm26397 snoRNA snoRNA MGP_LPJ_T0088826.1 MGP_LPJ_G0033580.1 mouse_genomes_project 8 69984063 69995222 - MGP_LPJ_P0088826 Zfp869 protein_coding unknown_likely_coding MGP_LPJ_T0099756.1 MGP_LPJ_G0038019.1 mouse_genomes_project 8 25929491 25929594 - Gm24202 snRNA snRNA MGP_LPJ_T0005393.1 MGP_LPJ_G0004571.1 mouse_genomes_project 8 69298601 69343117 + antisense antisense MGP_LPJ_T0089386.1 MGP_LPJ_G0033753.1 mouse_genomes_project 8 84978170 84981455 + MGP_LPJ_P0089386 1700067K01Rik protein_coding protein_coding MGP_LPJ_T0089387.1 MGP_LPJ_G0033753.1 mouse_genomes_project 8 84978372 84981354 + MGP_LPJ_P0089387 1700067K01Rik protein_coding protein_coding MGP_LPJ_T0089388.1 MGP_LPJ_G0033753.1 mouse_genomes_project 8 84978372 84981348 + MGP_LPJ_P0089388 1700067K01Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0089389.1 MGP_LPJ_G0033753.1 mouse_genomes_project 8 84979013 84979972 + 1700067K01Rik protein_coding retained_intron MGP_LPJ_T0087865.1 MGP_LPJ_G0033267.1 mouse_genomes_project 8 8584542 8612918 - MGP_LPJ_P0087865 Rab20 protein_coding protein_coding MGP_LPJ_T0089625.1 MGP_LPJ_G0033816.1 mouse_genomes_project 8 87824896 87847858 - MGP_LPJ_P0089625 Siah1a protein_coding protein_coding MGP_LPJ_T0087956.1 MGP_LPJ_G0033288.1 mouse_genomes_project 8 10417271 10442430 - MGP_LPJ_P0087956 Grtp1 protein_coding protein_coding MGP_LPJ_T0090041.1 MGP_LPJ_G0033966.1 mouse_genomes_project 8 108373866 108381236 - MGP_LPJ_P0090041 Cenpt protein_coding protein_coding MGP_LPJ_T0009141.1 MGP_LPJ_G0007353.1 mouse_genomes_project 8 88000838 88001717 + 2010110E17Rik lincRNA lincRNA MGP_LPJ_T0099768.1 MGP_LPJ_G0038031.1 mouse_genomes_project 8 59923362 59923466 + Gm26164 snRNA snRNA MGP_LPJ_T0011006.1 MGP_LPJ_G0009124.1 mouse_genomes_project 8 85198011 85198086 + Mir23a miRNA miRNA MGP_LPJ_T0090740.1 MGP_LPJ_G0034187.1 mouse_genomes_project 8 128943393 129171138 + MGP_LPJ_P0090740 protein_coding protein_coding MGP_LPJ_T0090741.1 MGP_LPJ_G0034187.1 mouse_genomes_project 8 128943393 129171845 + MGP_LPJ_P0090741 protein_coding protein_coding MGP_LPJ_T0090742.1 MGP_LPJ_G0034187.1 mouse_genomes_project 8 128943393 129171138 + MGP_LPJ_P0090742 protein_coding protein_coding MGP_LPJ_T0090743.1 MGP_LPJ_G0034187.1 mouse_genomes_project 8 128943393 129171138 + MGP_LPJ_P0090743 protein_coding protein_coding MGP_LPJ_T0090744.1 MGP_LPJ_G0034187.1 mouse_genomes_project 8 128943393 129171845 + MGP_LPJ_P0090744 protein_coding protein_coding MGP_LPJ_T0090745.1 MGP_LPJ_G0034187.1 mouse_genomes_project 8 128943393 129171138 + MGP_LPJ_P0090745 protein_coding protein_coding MGP_LPJ_T0090746.1 MGP_LPJ_G0034187.1 mouse_genomes_project 8 128943407 128980421 + MGP_LPJ_P0090746 protein_coding protein_coding MGP_LPJ_T0090747.1 MGP_LPJ_G0034187.1 mouse_genomes_project 8 128943428 129171135 + MGP_LPJ_P0090747 protein_coding protein_coding MGP_LPJ_T0090748.1 MGP_LPJ_G0034187.1 mouse_genomes_project 8 128977412 128994269 + protein_coding processed_transcript MGP_LPJ_T0010978.1 MGP_LPJ_G0009096.1 mouse_genomes_project 8 23152647 23152756 - Mir8108 miRNA miRNA MGP_LPJ_T0090515.1 MGP_LPJ_G0034120.1 mouse_genomes_project 8 125525670 125552347 - MGP_LPJ_P0090515 Slc7a5 protein_coding protein_coding MGP_LPJ_T0090516.1 MGP_LPJ_G0034120.1 mouse_genomes_project 8 125527323 125528436 - Slc7a5 protein_coding retained_intron MGP_LPJ_T0090517.1 MGP_LPJ_G0034120.1 mouse_genomes_project 8 125532895 125541014 - Slc7a5 protein_coding processed_transcript MGP_LPJ_T0089910.1 MGP_LPJ_G0033916.1 mouse_genomes_project 8 106783139 106843312 - MGP_LPJ_P0089910 Terb1 protein_coding protein_coding MGP_LPJ_T0089911.1 MGP_LPJ_G0033916.1 mouse_genomes_project 8 106783457 106843308 - MGP_LPJ_P0089911 Terb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0089912.1 MGP_LPJ_G0033916.1 mouse_genomes_project 8 106783458 106843307 - MGP_LPJ_P0089912 Terb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0089913.1 MGP_LPJ_G0033916.1 mouse_genomes_project 8 106784182 106843335 - MGP_LPJ_P0089913 Terb1 protein_coding protein_coding MGP_LPJ_T0088957.1 MGP_LPJ_G0033614.1 mouse_genomes_project 8 70779308 70782790 - MGP_LPJ_P0088957 Tmem59l protein_coding protein_coding MGP_LPJ_T0089411.1 MGP_LPJ_G0033764.1 mouse_genomes_project 8 85130899 85145486 + MGP_LPJ_P0089411 4930432K21Rik protein_coding protein_coding MGP_LPJ_T0089412.1 MGP_LPJ_G0033764.1 mouse_genomes_project 8 85131027 85155874 + MGP_LPJ_P0089412 4930432K21Rik protein_coding protein_coding MGP_LPJ_T0089413.1 MGP_LPJ_G0033764.1 mouse_genomes_project 8 85131120 85155873 + MGP_LPJ_P0089413 4930432K21Rik protein_coding protein_coding MGP_LPJ_T0089020.1 MGP_LPJ_G0033634.1 mouse_genomes_project 8 71090165 71099515 - MGP_LPJ_P0089020 Pik3r2 protein_coding protein_coding MGP_LPJ_T0089021.1 MGP_LPJ_G0033634.1 mouse_genomes_project 8 71090450 71091378 - MGP_LPJ_P0089021 Pik3r2 protein_coding protein_coding MGP_LPJ_T0089022.1 MGP_LPJ_G0033634.1 mouse_genomes_project 8 71090629 71091654 - Pik3r2 protein_coding retained_intron MGP_LPJ_T0089023.1 MGP_LPJ_G0033634.1 mouse_genomes_project 8 71094572 71095952 - Pik3r2 protein_coding retained_intron MGP_LPJ_T0089024.1 MGP_LPJ_G0033634.1 mouse_genomes_project 8 71094952 71097489 - MGP_LPJ_P0089024 Pik3r2 protein_coding protein_coding MGP_LPJ_T0089025.1 MGP_LPJ_G0033634.1 mouse_genomes_project 8 71097810 71099481 - Pik3r2 protein_coding processed_transcript MGP_LPJ_T0089581.1 MGP_LPJ_G0033802.1 mouse_genomes_project 8 86140250 86154978 + MGP_LPJ_P0089581 Man2b1 protein_coding protein_coding MGP_LPJ_T0089764.1 MGP_LPJ_G0033860.1 mouse_genomes_project 8 95608422 95639269 - MGP_LPJ_P0089764 Bbs2 protein_coding protein_coding MGP_LPJ_T0089765.1 MGP_LPJ_G0033860.1 mouse_genomes_project 8 95608612 95610682 - Bbs2 protein_coding processed_transcript MGP_LPJ_T0089766.1 MGP_LPJ_G0033860.1 mouse_genomes_project 8 95615609 95620214 - Bbs2 protein_coding processed_transcript MGP_LPJ_T0088520.1 MGP_LPJ_G0033488.1 mouse_genomes_project 8 45038065 45062196 - MGP_LPJ_P0088520 1700029J07Rik protein_coding protein_coding MGP_LPJ_T0088521.1 MGP_LPJ_G0033488.1 mouse_genomes_project 8 45038067 45062196 - MGP_LPJ_P0088521 1700029J07Rik protein_coding protein_coding MGP_LPJ_T0005366.1 MGP_LPJ_G0004549.1 mouse_genomes_project 8 20540412 20549801 + Gm15346 antisense antisense MGP_LPJ_T0088089.1 MGP_LPJ_G0033345.1 mouse_genomes_project 8 19720524 19721505 - MGP_LPJ_P0088089 Defb11 protein_coding protein_coding MGP_LPJ_T0009132.1 MGP_LPJ_G0007345.1 mouse_genomes_project 8 80046350 80058913 + Gm4890 lincRNA lincRNA MGP_LPJ_T0088669.1 MGP_LPJ_G0033536.1 mouse_genomes_project 8 60277475 60354440 - MGP_LPJ_P0088669 Gm10283 protein_coding protein_coding MGP_LPJ_T0089648.1 MGP_LPJ_G0033824.1 mouse_genomes_project 8 89377101 89447040 + MGP_LPJ_P0089648 Papd5 protein_coding protein_coding MGP_LPJ_T0089649.1 MGP_LPJ_G0033824.1 mouse_genomes_project 8 89377101 89447046 + MGP_LPJ_P0089649 Papd5 protein_coding protein_coding MGP_LPJ_T0089650.1 MGP_LPJ_G0033824.1 mouse_genomes_project 8 89377102 89447046 + MGP_LPJ_P0089650 Papd5 protein_coding protein_coding MGP_LPJ_T0089651.1 MGP_LPJ_G0033824.1 mouse_genomes_project 8 89430011 89435673 + Papd5 protein_coding retained_intron MGP_LPJ_T0089652.1 MGP_LPJ_G0033824.1 mouse_genomes_project 8 89438423 89443867 + MGP_LPJ_P0089652 Papd5 protein_coding protein_coding MGP_LPJ_T0015953.1 MGP_LPJ_G0014044.1 mouse_genomes_project 8 84275488 84275966 + processed_pseudogene processed_pseudogene MGP_LPJ_T0088386.1 MGP_LPJ_G0033453.1 mouse_genomes_project 8 35083053 35146814 + MGP_LPJ_P0088386 6430573F11Rik protein_coding protein_coding MGP_LPJ_T0088387.1 MGP_LPJ_G0033453.1 mouse_genomes_project 8 35083079 35148175 + MGP_LPJ_P0088387 6430573F11Rik protein_coding protein_coding MGP_LPJ_T0088388.1 MGP_LPJ_G0033453.1 mouse_genomes_project 8 35083687 35145449 + MGP_LPJ_P0088388 6430573F11Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0088389.1 MGP_LPJ_G0033453.1 mouse_genomes_project 8 35122207 35146869 + MGP_LPJ_P0088389 6430573F11Rik protein_coding protein_coding MGP_LPJ_T0088390.1 MGP_LPJ_G0033453.1 mouse_genomes_project 8 35139511 35146451 + 6430573F11Rik protein_coding processed_transcript MGP_LPJ_T0098323.1 MGP_LPJ_G0036604.1 mouse_genomes_project 8 77204624 77204752 - Gm27355 rRNA rRNA MGP_LPJ_T0002351.1 MGP_LPJ_G0002259.1 mouse_genomes_project 8 10508297 10509368 - TEC TEC MGP_LPJ_T0015909.1 MGP_LPJ_G0014000.1 mouse_genomes_project 8 18686305 18687450 - processed_pseudogene processed_pseudogene MGP_LPJ_T0089785.1 MGP_LPJ_G0033869.1 mouse_genomes_project 8 96103426 96145778 + MGP_LPJ_P0089785 Cpne2 protein_coding protein_coding MGP_LPJ_T0089786.1 MGP_LPJ_G0033869.1 mouse_genomes_project 8 96103475 96123380 + Cpne2 protein_coding retained_intron MGP_LPJ_T0089787.1 MGP_LPJ_G0033869.1 mouse_genomes_project 8 96103503 96124375 + Cpne2 protein_coding processed_transcript MGP_LPJ_T0089788.1 MGP_LPJ_G0033869.1 mouse_genomes_project 8 96103503 96145639 + MGP_LPJ_P0089788 Cpne2 protein_coding protein_coding MGP_LPJ_T0089789.1 MGP_LPJ_G0033869.1 mouse_genomes_project 8 96137879 96145362 + Cpne2 protein_coding retained_intron MGP_LPJ_T0011733.1 MGP_LPJ_G0009851.1 mouse_genomes_project 8 64993703 64993794 + Gm26210 misc_RNA misc_RNA MGP_LPJ_T0088624.1 MGP_LPJ_G0033521.1 mouse_genomes_project 8 54246319 54255820 + MGP_LPJ_P0088624 Spata4 protein_coding protein_coding MGP_LPJ_T0089221.1 MGP_LPJ_G0033700.1 mouse_genomes_project 8 75567875 75608697 + MGP_LPJ_P0089221 Hmgxb4 protein_coding protein_coding MGP_LPJ_T0089222.1 MGP_LPJ_G0033700.1 mouse_genomes_project 8 75568198 75575433 + Hmgxb4 protein_coding processed_transcript MGP_LPJ_T0089223.1 MGP_LPJ_G0033700.1 mouse_genomes_project 8 75568198 75608703 + MGP_LPJ_P0089223 Hmgxb4 protein_coding nonsense_mediated_decay MGP_LPJ_T0089224.1 MGP_LPJ_G0033700.1 mouse_genomes_project 8 75568210 75574855 + Hmgxb4 protein_coding processed_transcript MGP_LPJ_T0089225.1 MGP_LPJ_G0033700.1 mouse_genomes_project 8 75568231 75576419 + Hmgxb4 protein_coding retained_intron MGP_LPJ_T0089226.1 MGP_LPJ_G0033700.1 mouse_genomes_project 8 75573427 75608512 + MGP_LPJ_P0089226 Hmgxb4 protein_coding unknown_likely_coding MGP_LPJ_T0089227.1 MGP_LPJ_G0033700.1 mouse_genomes_project 8 75592962 75608638 + MGP_LPJ_P0089227 Hmgxb4 protein_coding protein_coding MGP_LPJ_T0089228.1 MGP_LPJ_G0033700.1 mouse_genomes_project 8 75599595 75600817 + Hmgxb4 protein_coding retained_intron MGP_LPJ_T0090160.1 MGP_LPJ_G0034010.1 mouse_genomes_project 8 112323643 112342796 - MGP_LPJ_P0090160 Dhx38 protein_coding protein_coding MGP_LPJ_T0005384.1 MGP_LPJ_G0004563.1 mouse_genomes_project 8 58289925 58290958 + Gm15882 antisense antisense MGP_LPJ_T0009144.1 MGP_LPJ_G0007356.1 mouse_genomes_project 8 88208811 88216497 + Gm5118 lincRNA lincRNA MGP_LPJ_T0089548.1 MGP_LPJ_G0033796.1 mouse_genomes_project 8 86085716 86107268 + MGP_LPJ_P0089548 Tnpo2 protein_coding unknown_likely_coding MGP_LPJ_T0089549.1 MGP_LPJ_G0033796.1 mouse_genomes_project 8 86085785 86107264 + MGP_LPJ_P0089549 Tnpo2 protein_coding protein_coding MGP_LPJ_T0089550.1 MGP_LPJ_G0033796.1 mouse_genomes_project 8 86086038 86107264 + MGP_LPJ_P0089550 Tnpo2 protein_coding protein_coding MGP_LPJ_T0089831.1 MGP_LPJ_G0033883.1 mouse_genomes_project 8 96570251 96608819 + MGP_LPJ_P0089831 Adgrg1 protein_coding protein_coding MGP_LPJ_T0089832.1 MGP_LPJ_G0033883.1 mouse_genomes_project 8 96577520 96608819 + MGP_LPJ_P0089832 Adgrg1 protein_coding protein_coding MGP_LPJ_T0087976.1 MGP_LPJ_G0033297.1 mouse_genomes_project 8 10834494 10846250 - MGP_LPJ_P0087976 1700029H14Rik protein_coding protein_coding MGP_LPJ_T0087977.1 MGP_LPJ_G0033297.1 mouse_genomes_project 8 10834494 10846237 - MGP_LPJ_P0087977 1700029H14Rik protein_coding protein_coding MGP_LPJ_T0087978.1 MGP_LPJ_G0033297.1 mouse_genomes_project 8 10834798 10846194 - MGP_LPJ_P0087978 1700029H14Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0087979.1 MGP_LPJ_G0033297.1 mouse_genomes_project 8 10834819 10846193 - MGP_LPJ_P0087979 1700029H14Rik protein_coding protein_coding MGP_LPJ_T0087980.1 MGP_LPJ_G0033297.1 mouse_genomes_project 8 10839765 10846194 - MGP_LPJ_P0087980 1700029H14Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0089723.1 MGP_LPJ_G0033850.1 mouse_genomes_project 8 94655665 94688080 - MGP_LPJ_P0089723 Ces1d protein_coding protein_coding MGP_LPJ_T0089724.1 MGP_LPJ_G0033850.1 mouse_genomes_project 8 94655900 94659232 - Ces1d protein_coding processed_transcript MGP_LPJ_T0089725.1 MGP_LPJ_G0033850.1 mouse_genomes_project 8 94655926 94664546 - Ces1d protein_coding processed_transcript MGP_LPJ_T0089726.1 MGP_LPJ_G0033850.1 mouse_genomes_project 8 94685046 94688019 - Ces1d protein_coding processed_transcript MGP_LPJ_T0088998.1 MGP_LPJ_G0033621.1 mouse_genomes_project 8 70898487 70901296 + MGP_LPJ_P0088998 Isyna1 protein_coding protein_coding MGP_LPJ_T0089666.1 MGP_LPJ_G0033828.1 mouse_genomes_project 8 89837296 89846699 - MGP_LPJ_P0089666 Snx20 protein_coding protein_coding MGP_LPJ_T0098319.1 MGP_LPJ_G0036600.1 mouse_genomes_project 8 47097877 47097990 + n-R5s97 rRNA rRNA MGP_LPJ_T0098061.1 MGP_LPJ_G0036342.1 mouse_genomes_project 8 75987763 75988301 + pseudogene pseudogene MGP_LPJ_T0090419.1 MGP_LPJ_G0034100.1 mouse_genomes_project 8 123596489 123617775 - MGP_LPJ_P0090419 Zdhhc7 protein_coding protein_coding MGP_LPJ_T0090420.1 MGP_LPJ_G0034100.1 mouse_genomes_project 8 123597797 123602195 - Zdhhc7 protein_coding retained_intron MGP_LPJ_T0090421.1 MGP_LPJ_G0034100.1 mouse_genomes_project 8 123600581 123603435 - Zdhhc7 protein_coding retained_intron MGP_LPJ_T0090422.1 MGP_LPJ_G0034100.1 mouse_genomes_project 8 123600771 123603628 - Zdhhc7 protein_coding retained_intron MGP_LPJ_T0090423.1 MGP_LPJ_G0034100.1 mouse_genomes_project 8 123609267 123617365 - Zdhhc7 protein_coding processed_transcript MGP_LPJ_T0015957.1 MGP_LPJ_G0014048.1 mouse_genomes_project 8 90389265 90389590 - processed_pseudogene processed_pseudogene MGP_LPJ_T0089107.1 MGP_LPJ_G0033660.1 mouse_genomes_project 8 71926126 71931016 + MGP_LPJ_P0089107 Mvb12a protein_coding protein_coding MGP_LPJ_T0009207.1 MGP_LPJ_G0007397.1 mouse_genomes_project 8 124872205 124980699 - Gm26815 lincRNA lincRNA MGP_LPJ_T0015931.1 MGP_LPJ_G0014022.1 mouse_genomes_project 8 58480590 58481532 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009080.1 MGP_LPJ_G0007303.1 mouse_genomes_project 8 8027387 8031420 - 3930402G23Rik lincRNA lincRNA MGP_LPJ_T0018436.1 MGP_LPJ_G0015640.1 mouse_genomes_project 8 97451151 97467503 + 4930513N10Rik processed_transcript processed_transcript MGP_LPJ_T0018437.1 MGP_LPJ_G0015640.1 mouse_genomes_project 8 97451294 97454523 + 4930513N10Rik processed_transcript processed_transcript MGP_LPJ_T0018438.1 MGP_LPJ_G0015640.1 mouse_genomes_project 8 97453354 97467472 + 4930513N10Rik processed_transcript processed_transcript MGP_LPJ_T0089016.1 MGP_LPJ_G0033631.1 mouse_genomes_project 8 71077837 71080662 + MGP_LPJ_P0089016 Rab3a protein_coding protein_coding MGP_LPJ_T0089017.1 MGP_LPJ_G0033631.1 mouse_genomes_project 8 71078438 71079681 + Rab3a protein_coding retained_intron MGP_LPJ_T0101029.1 MGP_LPJ_G0039292.1 mouse_genomes_project 8 52550185 52550301 + Gm23666 snoRNA snoRNA MGP_LPJ_T0087776.1 MGP_LPJ_G0033238.1 mouse_genomes_project 8 858419 864248 - MGP_LPJ_P0087776 Cd209c protein_coding protein_coding MGP_LPJ_T0087777.1 MGP_LPJ_G0033238.1 mouse_genomes_project 8 858491 866186 - MGP_LPJ_P0087777 Cd209c protein_coding nonsense_mediated_decay MGP_LPJ_T0087778.1 MGP_LPJ_G0033238.1 mouse_genomes_project 8 862270 866091 - MGP_LPJ_P0087778 Cd209c protein_coding unknown_likely_coding MGP_LPJ_T0005421.1 MGP_LPJ_G0004595.1 mouse_genomes_project 8 120288921 120299481 + Gm15395 antisense antisense MGP_LPJ_T0090625.1 MGP_LPJ_G0034150.1 mouse_genomes_project 8 126956559 126966517 + MGP_LPJ_P0090625 Cdk10 protein_coding protein_coding MGP_LPJ_T0090626.1 MGP_LPJ_G0034150.1 mouse_genomes_project 8 126957875 126963460 + MGP_LPJ_P0090626 Cdk10 protein_coding unknown_likely_coding MGP_LPJ_T0090804.1 MGP_LPJ_G0034203.1 mouse_genomes_project 8 132885325 132929642 - MGP_LPJ_P0090804 Gm3952 protein_coding protein_coding MGP_LPJ_T0090010.1 MGP_LPJ_G0033951.1 mouse_genomes_project 8 107958452 107962486 - MGP_LPJ_P0090010 Tppp3 protein_coding protein_coding MGP_LPJ_T0090011.1 MGP_LPJ_G0033951.1 mouse_genomes_project 8 107958628 107960370 - MGP_LPJ_P0090011 Tppp3 protein_coding protein_coding MGP_LPJ_T0090012.1 MGP_LPJ_G0033951.1 mouse_genomes_project 8 107958642 107959622 - MGP_LPJ_P0090012 Tppp3 protein_coding protein_coding MGP_LPJ_T0011052.1 MGP_LPJ_G0009170.1 mouse_genomes_project 8 132479854 132479934 + Mir1903 miRNA miRNA MGP_LPJ_T0005363.1 MGP_LPJ_G0004547.1 mouse_genomes_project 8 13598513 13604817 + Gm16346 antisense antisense MGP_LPJ_T0099775.1 MGP_LPJ_G0038038.1 mouse_genomes_project 8 78481586 78481692 + Gm23981 snRNA snRNA MGP_LPJ_T0102467.1 MGP_LPJ_G0040503.1 mouse_genomes_project 8 16741920 16744452 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0011736.1 MGP_LPJ_G0009854.1 mouse_genomes_project 8 84713675 84713961 + Gm22024 misc_RNA misc_RNA MGP_LPJ_T0015938.1 MGP_LPJ_G0014029.1 mouse_genomes_project 8 73007019 73007422 - processed_pseudogene processed_pseudogene MGP_LPJ_T0090370.1 MGP_LPJ_G0034083.1 mouse_genomes_project 8 122858509 122876160 + MGP_LPJ_P0090370 Mlycd protein_coding protein_coding MGP_LPJ_T0090371.1 MGP_LPJ_G0034083.1 mouse_genomes_project 8 122858529 122876145 + Mlycd protein_coding retained_intron MGP_LPJ_T0089751.1 MGP_LPJ_G0033857.1 mouse_genomes_project 8 95506230 95551267 - MGP_LPJ_P0089751 Amfr protein_coding protein_coding MGP_LPJ_T0089752.1 MGP_LPJ_G0033857.1 mouse_genomes_project 8 95507543 95509558 - Amfr protein_coding retained_intron MGP_LPJ_T0089753.1 MGP_LPJ_G0033857.1 mouse_genomes_project 8 95507599 95508603 - Amfr protein_coding processed_transcript MGP_LPJ_T0089754.1 MGP_LPJ_G0033857.1 mouse_genomes_project 8 95507808 95551071 - MGP_LPJ_P0089754 Amfr protein_coding unknown_likely_coding MGP_LPJ_T0089755.1 MGP_LPJ_G0033857.1 mouse_genomes_project 8 95536039 95550725 - MGP_LPJ_P0089755 Amfr protein_coding protein_coding MGP_LPJ_T0088481.1 MGP_LPJ_G0033480.1 mouse_genomes_project 8 44288647 44312277 - MGP_LPJ_P0088481 F11 protein_coding protein_coding MGP_LPJ_T0009092.1 MGP_LPJ_G0007311.1 mouse_genomes_project 8 20332797 20335761 + Gm17491 lincRNA lincRNA MGP_LPJ_T0089125.1 MGP_LPJ_G0033667.1 mouse_genomes_project 8 72009556 72057953 - MGP_LPJ_P0089125 Unc13a protein_coding protein_coding MGP_LPJ_T0089126.1 MGP_LPJ_G0033667.1 mouse_genomes_project 8 72014211 72057932 - MGP_LPJ_P0089126 Unc13a protein_coding protein_coding MGP_LPJ_T0089127.1 MGP_LPJ_G0033667.1 mouse_genomes_project 8 72019785 72027276 - MGP_LPJ_P0089127 Unc13a protein_coding nonsense_mediated_decay MGP_LPJ_T0089128.1 MGP_LPJ_G0033667.1 mouse_genomes_project 8 72020050 72028447 - Unc13a protein_coding retained_intron MGP_LPJ_T0089129.1 MGP_LPJ_G0033667.1 mouse_genomes_project 8 72027338 72031808 - MGP_LPJ_P0089129 Unc13a protein_coding protein_coding MGP_LPJ_T0089130.1 MGP_LPJ_G0033667.1 mouse_genomes_project 8 72039480 72044366 - MGP_LPJ_P0089130 Unc13a protein_coding protein_coding MGP_LPJ_T0089131.1 MGP_LPJ_G0033667.1 mouse_genomes_project 8 72046234 72057937 - Unc13a protein_coding retained_intron MGP_LPJ_T0089132.1 MGP_LPJ_G0033667.1 mouse_genomes_project 8 72046239 72054302 - Unc13a protein_coding retained_intron MGP_LPJ_T0090056.1 MGP_LPJ_G0033974.1 mouse_genomes_project 8 108479380 108483212 - MGP_LPJ_P0090056 Lcat protein_coding protein_coding MGP_LPJ_T0090567.1 MGP_LPJ_G0034132.1 mouse_genomes_project 8 126148245 126221333 - MGP_LPJ_P0090567 Piezo1 protein_coding protein_coding MGP_LPJ_T0090568.1 MGP_LPJ_G0034132.1 mouse_genomes_project 8 126148259 126166271 - MGP_LPJ_P0090568 Piezo1 protein_coding protein_coding MGP_LPJ_T0090569.1 MGP_LPJ_G0034132.1 mouse_genomes_project 8 126148268 126151328 - Piezo1 protein_coding retained_intron MGP_LPJ_T0090570.1 MGP_LPJ_G0034132.1 mouse_genomes_project 8 126148529 126221042 - MGP_LPJ_P0090570 Piezo1 protein_coding unknown_likely_coding MGP_LPJ_T0090571.1 MGP_LPJ_G0034132.1 mouse_genomes_project 8 126148529 126166270 - MGP_LPJ_P0090571 Piezo1 protein_coding nonsense_mediated_decay MGP_LPJ_T0090572.1 MGP_LPJ_G0034132.1 mouse_genomes_project 8 126148588 126149548 - Piezo1 protein_coding retained_intron MGP_LPJ_T0090573.1 MGP_LPJ_G0034132.1 mouse_genomes_project 8 126148627 126149224 - Piezo1 protein_coding retained_intron MGP_LPJ_T0090574.1 MGP_LPJ_G0034132.1 mouse_genomes_project 8 126149914 126150417 - Piezo1 protein_coding retained_intron MGP_LPJ_T0090575.1 MGP_LPJ_G0034132.1 mouse_genomes_project 8 126151412 126152172 - Piezo1 protein_coding retained_intron MGP_LPJ_T0090576.1 MGP_LPJ_G0034132.1 mouse_genomes_project 8 126152471 126164589 - MGP_LPJ_P0090576 Piezo1 protein_coding nonsense_mediated_decay MGP_LPJ_T0089930.1 MGP_LPJ_G0033922.1 mouse_genomes_project 8 106989107 106991234 - MGP_LPJ_P0089930 Fam96b protein_coding protein_coding MGP_LPJ_T0089931.1 MGP_LPJ_G0033922.1 mouse_genomes_project 8 106989109 106990968 - Fam96b protein_coding retained_intron MGP_LPJ_T0089932.1 MGP_LPJ_G0033922.1 mouse_genomes_project 8 106989116 106990970 - MGP_LPJ_P0089932 Fam96b protein_coding protein_coding MGP_LPJ_T0088178.1 MGP_LPJ_G0033381.1 mouse_genomes_project 8 22596280 22664544 - MGP_LPJ_P0088178 Adam18 protein_coding protein_coding MGP_LPJ_T0088179.1 MGP_LPJ_G0033381.1 mouse_genomes_project 8 22596280 22664544 - MGP_LPJ_P0088179 Adam18 protein_coding nonsense_mediated_decay MGP_LPJ_T0088180.1 MGP_LPJ_G0033381.1 mouse_genomes_project 8 22596284 22619300 - Adam18 protein_coding processed_transcript MGP_LPJ_T0009126.1 MGP_LPJ_G0007340.1 mouse_genomes_project 8 71333265 71355247 - lincRNA lincRNA MGP_LPJ_T0088652.1 MGP_LPJ_G0033530.1 mouse_genomes_project 8 57190804 57213479 + MGP_LPJ_P0088652 Scrg1 protein_coding protein_coding MGP_LPJ_T0015930.1 MGP_LPJ_G0014021.1 mouse_genomes_project 8 51753764 51754730 - processed_pseudogene processed_pseudogene MGP_LPJ_T0088573.1 MGP_LPJ_G0033501.1 mouse_genomes_project 8 46141005 46187927 + Enpp6 protein_coding retained_intron MGP_LPJ_T0088574.1 MGP_LPJ_G0033501.1 mouse_genomes_project 8 46141007 46248693 + Enpp6 protein_coding retained_intron MGP_LPJ_T0088575.1 MGP_LPJ_G0033501.1 mouse_genomes_project 8 46141007 46248693 + MGP_LPJ_P0088575 Enpp6 protein_coding protein_coding MGP_LPJ_T0088576.1 MGP_LPJ_G0033501.1 mouse_genomes_project 8 46141034 46240599 + MGP_LPJ_P0088576 Enpp6 protein_coding protein_coding MGP_LPJ_T0088577.1 MGP_LPJ_G0033501.1 mouse_genomes_project 8 46225792 46241307 + MGP_LPJ_P0088577 Enpp6 protein_coding protein_coding MGP_LPJ_T0009143.1 MGP_LPJ_G0007355.1 mouse_genomes_project 8 88037214 88037885 - Gm27168 lincRNA lincRNA MGP_LPJ_T0010989.1 MGP_LPJ_G0009107.1 mouse_genomes_project 8 67830054 67830147 - Gm44391 miRNA miRNA MGP_LPJ_T0090553.1 MGP_LPJ_G0034128.1 mouse_genomes_project 8 126097876 126109747 - MGP_LPJ_P0090553 Mvd protein_coding protein_coding MGP_LPJ_T0088867.1 MGP_LPJ_G0033595.1 mouse_genomes_project 8 70361645 70368743 + MGP_LPJ_P0088867 Tm6sf2 protein_coding protein_coding MGP_LPJ_T0088868.1 MGP_LPJ_G0033595.1 mouse_genomes_project 8 70361653 70368729 + MGP_LPJ_P0088868 Tm6sf2 protein_coding protein_coding MGP_LPJ_T0088869.1 MGP_LPJ_G0033595.1 mouse_genomes_project 8 70361716 70368737 + MGP_LPJ_P0088869 Tm6sf2 protein_coding unknown_likely_coding MGP_LPJ_T0088870.1 MGP_LPJ_G0033595.1 mouse_genomes_project 8 70363005 70364391 + Tm6sf2 protein_coding retained_intron MGP_LPJ_T0088871.1 MGP_LPJ_G0033595.1 mouse_genomes_project 8 70364105 70366806 + Tm6sf2 protein_coding retained_intron MGP_LPJ_T0088872.1 MGP_LPJ_G0033595.1 mouse_genomes_project 8 70366083 70367297 + Tm6sf2 protein_coding retained_intron MGP_LPJ_T0011730.1 MGP_LPJ_G0009848.1 mouse_genomes_project 8 29896897 29897121 - Gm23539 misc_RNA misc_RNA MGP_LPJ_T0089836.1 MGP_LPJ_G0033887.1 mouse_genomes_project 8 96701171 96737426 - MGP_LPJ_P0089836 Kifc3 protein_coding protein_coding MGP_LPJ_T0089837.1 MGP_LPJ_G0033887.1 mouse_genomes_project 8 96701171 96714669 - MGP_LPJ_P0089837 Kifc3 protein_coding protein_coding MGP_LPJ_T0089838.1 MGP_LPJ_G0033887.1 mouse_genomes_project 8 96701171 96737426 - MGP_LPJ_P0089838 Kifc3 protein_coding protein_coding MGP_LPJ_T0090212.1 MGP_LPJ_G0034031.1 mouse_genomes_project 8 113690353 113726657 - MGP_LPJ_P0090212 Sf3b3 protein_coding protein_coding MGP_LPJ_T0087955.1 MGP_LPJ_G0033287.1 mouse_genomes_project 8 10399455 10415764 + MGP_LPJ_P0087955 Lamp1 protein_coding protein_coding MGP_LPJ_T0089543.1 MGP_LPJ_G0033791.1 mouse_genomes_project 8 86021732 86023573 - MGP_LPJ_P0089543 Junb protein_coding protein_coding MGP_LPJ_T0099784.1 MGP_LPJ_G0038047.1 mouse_genomes_project 8 104535327 104535390 + Gm24602 snRNA snRNA MGP_LPJ_T0090192.1 MGP_LPJ_G0034022.1 mouse_genomes_project 8 112889291 112901320 + MGP_LPJ_P0090192 Zfp612 protein_coding protein_coding MGP_LPJ_T0088955.1 MGP_LPJ_G0033613.1 mouse_genomes_project 8 70745997 70772075 - MGP_LPJ_P0088955 Klhl26 protein_coding protein_coding MGP_LPJ_T0088956.1 MGP_LPJ_G0033613.1 mouse_genomes_project 8 70745997 70772075 - MGP_LPJ_P0088956 Klhl26 protein_coding protein_coding MGP_LPJ_T0010992.1 MGP_LPJ_G0009110.1 mouse_genomes_project 8 71226534 71226597 - Mir7067 miRNA miRNA MGP_LPJ_T0090163.1 MGP_LPJ_G0034012.1 mouse_genomes_project 8 112352312 112356357 - MGP_LPJ_P0090163 Hp protein_coding protein_coding MGP_LPJ_T0005425.1 MGP_LPJ_G0004599.1 mouse_genomes_project 8 125552740 125554737 + BC048644 antisense antisense MGP_LPJ_T0005426.1 MGP_LPJ_G0004599.1 mouse_genomes_project 8 125552740 125563131 + BC048644 antisense antisense MGP_LPJ_T0010981.1 MGP_LPJ_G0009099.1 mouse_genomes_project 8 32626292 32626383 - Mir6395 miRNA miRNA MGP_LPJ_T0009081.1 MGP_LPJ_G0007304.1 mouse_genomes_project 8 8117163 8167276 + 9530052E02Rik lincRNA lincRNA MGP_LPJ_T0009082.1 MGP_LPJ_G0007304.1 mouse_genomes_project 8 8162317 8167281 + 9530052E02Rik lincRNA lincRNA MGP_LPJ_T0002354.1 MGP_LPJ_G0002262.1 mouse_genomes_project 8 21102823 21103672 + TEC TEC MGP_LPJ_T0090536.1 MGP_LPJ_G0034123.1 mouse_genomes_project 8 125938807 125995420 + MGP_LPJ_P0090536 Zfpm1 protein_coding protein_coding MGP_LPJ_T0090537.1 MGP_LPJ_G0034123.1 mouse_genomes_project 8 125963670 125980066 + Zfpm1 protein_coding processed_transcript MGP_LPJ_T0090538.1 MGP_LPJ_G0034123.1 mouse_genomes_project 8 125989897 125993198 + Zfpm1 protein_coding processed_transcript MGP_LPJ_T0090539.1 MGP_LPJ_G0034123.1 mouse_genomes_project 8 125989985 125993930 + MGP_LPJ_P0090539 Zfpm1 protein_coding protein_coding MGP_LPJ_T0090356.1 MGP_LPJ_G0034077.1 mouse_genomes_project 8 120815287 120970373 + MGP_LPJ_P0090356 Plcg2 protein_coding protein_coding MGP_LPJ_T0088102.1 MGP_LPJ_G0033353.1 mouse_genomes_project 8 19916015 19961156 - MGP_LPJ_P0088102 Nek5 protein_coding protein_coding MGP_LPJ_T0089592.1 MGP_LPJ_G0033808.1 mouse_genomes_project 8 86454172 86481279 - MGP_LPJ_P0089592 4921524J17Rik protein_coding protein_coding MGP_LPJ_T0090296.1 MGP_LPJ_G0034054.1 mouse_genomes_project 8 114959132 114985302 - MGP_LPJ_P0090296 Adat1 protein_coding protein_coding MGP_LPJ_T0090297.1 MGP_LPJ_G0034054.1 mouse_genomes_project 8 114964321 114985243 - MGP_LPJ_P0090297 Adat1 protein_coding protein_coding MGP_LPJ_T0011022.1 MGP_LPJ_G0009140.1 mouse_genomes_project 8 98341359 98341435 + Gm24132 miRNA miRNA MGP_LPJ_T0089140.1 MGP_LPJ_G0033671.1 mouse_genomes_project 8 72110107 72122914 - MGP_LPJ_P0089140 Fcho1 protein_coding protein_coding MGP_LPJ_T0089141.1 MGP_LPJ_G0033671.1 mouse_genomes_project 8 72110114 72127321 - MGP_LPJ_P0089141 Fcho1 protein_coding protein_coding MGP_LPJ_T0089142.1 MGP_LPJ_G0033671.1 mouse_genomes_project 8 72110140 72127271 - Fcho1 protein_coding retained_intron MGP_LPJ_T0089143.1 MGP_LPJ_G0033671.1 mouse_genomes_project 8 72110373 72127271 - MGP_LPJ_P0089143 Fcho1 protein_coding nonsense_mediated_decay MGP_LPJ_T0089144.1 MGP_LPJ_G0033671.1 mouse_genomes_project 8 72111357 72112827 - Fcho1 protein_coding retained_intron MGP_LPJ_T0089145.1 MGP_LPJ_G0033671.1 mouse_genomes_project 8 72111409 72113900 - Fcho1 protein_coding retained_intron MGP_LPJ_T0089146.1 MGP_LPJ_G0033671.1 mouse_genomes_project 8 72114260 72117262 - MGP_LPJ_P0089146 Fcho1 protein_coding nonsense_mediated_decay MGP_LPJ_T0089147.1 MGP_LPJ_G0033671.1 mouse_genomes_project 8 72116068 72118314 - Fcho1 protein_coding retained_intron MGP_LPJ_T0089148.1 MGP_LPJ_G0033671.1 mouse_genomes_project 8 72117475 72127309 - MGP_LPJ_P0089148 Fcho1 protein_coding protein_coding MGP_LPJ_T0089149.1 MGP_LPJ_G0033671.1 mouse_genomes_project 8 72117570 72123472 - Fcho1 protein_coding processed_transcript MGP_LPJ_T0089150.1 MGP_LPJ_G0033671.1 mouse_genomes_project 8 72118495 72127252 - Fcho1 protein_coding retained_intron MGP_LPJ_T0089151.1 MGP_LPJ_G0033671.1 mouse_genomes_project 8 72118893 72124954 - MGP_LPJ_P0089151 Fcho1 protein_coding protein_coding MGP_LPJ_T0002361.1 MGP_LPJ_G0002268.1 mouse_genomes_project 8 108139409 108140547 + TEC TEC MGP_LPJ_T0009164.1 MGP_LPJ_G0007368.1 mouse_genomes_project 8 93181176 93191414 + Irx3os lincRNA lincRNA MGP_LPJ_T0009165.1 MGP_LPJ_G0007368.1 mouse_genomes_project 8 93182936 93189090 + Irx3os lincRNA lincRNA MGP_LPJ_T0099759.1 MGP_LPJ_G0038022.1 mouse_genomes_project 8 36037015 36037117 - Gm25126 snRNA snRNA MGP_LPJ_T0089399.1 MGP_LPJ_G0033757.1 mouse_genomes_project 8 85020089 85022170 - MGP_LPJ_P0089399 Rln3 protein_coding protein_coding MGP_LPJ_T0101028.1 MGP_LPJ_G0039291.1 mouse_genomes_project 8 48235610 48235742 - Gm25830 snoRNA snoRNA MGP_LPJ_T0101060.1 MGP_LPJ_G0039323.1 mouse_genomes_project 8 113811061 113811209 + Gm26132 snoRNA snoRNA MGP_LPJ_T0098382.1 MGP_LPJ_G0036663.1 mouse_genomes_project 8 69690484 69690780 + Gm25661 ribozyme ribozyme MGP_LPJ_T0015897.1 MGP_LPJ_G0013988.1 mouse_genomes_project 8 2019374 2019862 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098325.1 MGP_LPJ_G0036606.1 mouse_genomes_project 8 131668334 131668452 + Gm22968 rRNA rRNA MGP_LPJ_T0087769.1 MGP_LPJ_G0033234.1 mouse_genomes_project 8 672921 678510 - MGP_LPJ_P0087769 Cd209a protein_coding protein_coding MGP_LPJ_T0090334.1 MGP_LPJ_G0034066.1 mouse_genomes_project 8 119733227 119744777 + MGP_LPJ_P0090334 Dynlrb2 protein_coding protein_coding MGP_LPJ_T0099785.1 MGP_LPJ_G0038048.1 mouse_genomes_project 8 106841333 106841440 + Gm22148 snRNA snRNA MGP_LPJ_T0089001.1 MGP_LPJ_G0033624.1 mouse_genomes_project 8 70937343 70940047 - MGP_LPJ_P0089001 Gdf15 protein_coding protein_coding MGP_LPJ_T0089002.1 MGP_LPJ_G0033624.1 mouse_genomes_project 8 70937344 70940408 - MGP_LPJ_P0089002 Gdf15 protein_coding protein_coding MGP_LPJ_T0087766.1 MGP_LPJ_G0033233.1 mouse_genomes_project 8 636627 647115 - MGP_LPJ_P0087766 Clec4g protein_coding protein_coding MGP_LPJ_T0087767.1 MGP_LPJ_G0033233.1 mouse_genomes_project 8 645625 650213 - MGP_LPJ_P0087767 Clec4g protein_coding protein_coding MGP_LPJ_T0087768.1 MGP_LPJ_G0033233.1 mouse_genomes_project 8 646775 648215 - Clec4g protein_coding retained_intron MGP_LPJ_T0088076.1 MGP_LPJ_G0033333.1 mouse_genomes_project 8 16833668 16835600 + MGP_LPJ_P0088076 Defb3 protein_coding protein_coding MGP_LPJ_T0011742.1 MGP_LPJ_G0009860.1 mouse_genomes_project 8 113359489 113359780 + Gm22701 misc_RNA misc_RNA MGP_LPJ_T0010977.1 MGP_LPJ_G0009095.1 mouse_genomes_project 8 21030945 21031035 - Mir3107 miRNA miRNA MGP_LPJ_T0088703.1 MGP_LPJ_G0033544.1 mouse_genomes_project 8 61408837 61818049 - MGP_LPJ_P0088703 Palld protein_coding protein_coding MGP_LPJ_T0088704.1 MGP_LPJ_G0033544.1 mouse_genomes_project 8 61408843 61670989 - MGP_LPJ_P0088704 Palld protein_coding protein_coding MGP_LPJ_T0088705.1 MGP_LPJ_G0033544.1 mouse_genomes_project 8 61408943 61498508 - MGP_LPJ_P0088705 Palld protein_coding protein_coding MGP_LPJ_T0088706.1 MGP_LPJ_G0033544.1 mouse_genomes_project 8 61410516 61411492 - Palld protein_coding retained_intron MGP_LPJ_T0088707.1 MGP_LPJ_G0033544.1 mouse_genomes_project 8 61410612 61818070 - MGP_LPJ_P0088707 Palld protein_coding protein_coding MGP_LPJ_T0088708.1 MGP_LPJ_G0033544.1 mouse_genomes_project 8 61411504 61490497 - MGP_LPJ_P0088708 Palld protein_coding protein_coding MGP_LPJ_T0088709.1 MGP_LPJ_G0033544.1 mouse_genomes_project 8 61420709 61430660 - Palld protein_coding retained_intron MGP_LPJ_T0088710.1 MGP_LPJ_G0033544.1 mouse_genomes_project 8 61590599 61670998 - Palld protein_coding retained_intron MGP_LPJ_T0088711.1 MGP_LPJ_G0033544.1 mouse_genomes_project 8 61617012 61670989 - Palld protein_coding retained_intron MGP_LPJ_T0089599.1 MGP_LPJ_G0033811.1 mouse_genomes_project 8 86703970 86762545 - MGP_LPJ_P0089599 Neto2 protein_coding protein_coding MGP_LPJ_T0089600.1 MGP_LPJ_G0033811.1 mouse_genomes_project 8 86704097 86772241 - MGP_LPJ_P0089600 Neto2 protein_coding unknown_likely_coding MGP_LPJ_T0087733.1 MGP_LPJ_G0033225.1 mouse_genomes_project 8 537889 550713 - Xab2 protein_coding retained_intron MGP_LPJ_T0087734.1 MGP_LPJ_G0033225.1 mouse_genomes_project 8 539555 550724 - MGP_LPJ_P0087734 Xab2 protein_coding protein_coding MGP_LPJ_T0087735.1 MGP_LPJ_G0033225.1 mouse_genomes_project 8 539558 550710 - Xab2 protein_coding retained_intron MGP_LPJ_T0087736.1 MGP_LPJ_G0033225.1 mouse_genomes_project 8 543785 550678 - MGP_LPJ_P0087736 Xab2 protein_coding protein_coding MGP_LPJ_T0087737.1 MGP_LPJ_G0033225.1 mouse_genomes_project 8 545463 550690 - MGP_LPJ_P0087737 Xab2 protein_coding nonsense_mediated_decay MGP_LPJ_T0088614.1 MGP_LPJ_G0033515.1 mouse_genomes_project 8 48664524 48670865 + protein_coding processed_transcript MGP_LPJ_T0088615.1 MGP_LPJ_G0033515.1 mouse_genomes_project 8 48664551 48799319 + MGP_LPJ_P0088615 protein_coding protein_coding MGP_LPJ_T0088616.1 MGP_LPJ_G0033515.1 mouse_genomes_project 8 48758806 48799226 + MGP_LPJ_P0088616 protein_coding protein_coding MGP_LPJ_T0088617.1 MGP_LPJ_G0033515.1 mouse_genomes_project 8 48782318 48818212 + protein_coding processed_transcript MGP_LPJ_T0002364.1 MGP_LPJ_G0002271.1 mouse_genomes_project 8 111597728 111599432 + TEC TEC MGP_LPJ_T0089602.1 MGP_LPJ_G0033813.1 mouse_genomes_project 8 86925589 86968030 + protein_coding processed_transcript MGP_LPJ_T0089603.1 MGP_LPJ_G0033813.1 mouse_genomes_project 8 86925621 87018296 + MGP_LPJ_P0089603 protein_coding nonsense_mediated_decay MGP_LPJ_T0089604.1 MGP_LPJ_G0033813.1 mouse_genomes_project 8 86925638 87002928 + protein_coding processed_transcript MGP_LPJ_T0089605.1 MGP_LPJ_G0033813.1 mouse_genomes_project 8 86925646 87002662 + MGP_LPJ_P0089605 protein_coding protein_coding MGP_LPJ_T0089606.1 MGP_LPJ_G0033813.1 mouse_genomes_project 8 86925674 87144685 + MGP_LPJ_P0089606 protein_coding unknown_likely_coding MGP_LPJ_T0089607.1 MGP_LPJ_G0033813.1 mouse_genomes_project 8 86927417 86984494 + MGP_LPJ_P0089607 protein_coding protein_coding MGP_LPJ_T0089608.1 MGP_LPJ_G0033813.1 mouse_genomes_project 8 86927681 86968117 + MGP_LPJ_P0089608 protein_coding nonsense_mediated_decay MGP_LPJ_T0089609.1 MGP_LPJ_G0033813.1 mouse_genomes_project 8 87099567 87113291 + MGP_LPJ_P0089609 protein_coding protein_coding MGP_LPJ_T0089610.1 MGP_LPJ_G0033813.1 mouse_genomes_project 8 87118543 87145884 + protein_coding processed_transcript MGP_LPJ_T0088091.1 MGP_LPJ_G0033347.1 mouse_genomes_project 8 19782619 19782838 + MGP_LPJ_P0088091 Defb35 protein_coding protein_coding MGP_LPJ_T0088597.1 MGP_LPJ_G0033510.1 mouse_genomes_project 8 47012265 47013038 + MGP_LPJ_P0088597 Cldn24 protein_coding protein_coding MGP_LPJ_T0098680.1 MGP_LPJ_G0036949.1 mouse_genomes_project 8 124072483 124073555 + Gm26971 sense_intronic sense_intronic MGP_LPJ_T0101033.1 MGP_LPJ_G0039296.1 mouse_genomes_project 8 62728616 62728730 + Gm22324 snoRNA snoRNA MGP_LPJ_T0089267.1 MGP_LPJ_G0033712.1 mouse_genomes_project 8 79124710 79128346 - MGP_LPJ_P0089267 Pou4f2 protein_coding protein_coding MGP_LPJ_T0018400.1 MGP_LPJ_G0015626.1 mouse_genomes_project 8 23025737 23030451 + Gm16933 processed_transcript processed_transcript MGP_LPJ_T0018446.1 MGP_LPJ_G0015645.1 mouse_genomes_project 8 126038328 126040742 + Gm20681 processed_transcript processed_transcript MGP_LPJ_T0009160.1 MGP_LPJ_G0007365.1 mouse_genomes_project 8 88641770 88642953 - 1700120C18Rik lincRNA lincRNA MGP_LPJ_T0088618.1 MGP_LPJ_G0033516.1 mouse_genomes_project 8 53088389 53100691 + MGP_LPJ_P0088618 Aga protein_coding protein_coding MGP_LPJ_T0089908.1 MGP_LPJ_G0033914.1 mouse_genomes_project 8 106667534 106723576 - MGP_LPJ_P0089908 Cmtm4 protein_coding protein_coding MGP_LPJ_T0015929.1 MGP_LPJ_G0014020.1 mouse_genomes_project 8 40988710 40990360 - processed_pseudogene processed_pseudogene MGP_LPJ_T0088721.1 MGP_LPJ_G0033547.1 mouse_genomes_project 8 62908118 63326972 + MGP_LPJ_P0088721 protein_coding protein_coding MGP_LPJ_T0088722.1 MGP_LPJ_G0033547.1 mouse_genomes_project 8 62908341 63326980 + MGP_LPJ_P0088722 protein_coding protein_coding MGP_LPJ_T0088723.1 MGP_LPJ_G0033547.1 mouse_genomes_project 8 62908470 63122678 + protein_coding retained_intron MGP_LPJ_T0088724.1 MGP_LPJ_G0033547.1 mouse_genomes_project 8 62908470 63327223 + MGP_LPJ_P0088724 protein_coding protein_coding MGP_LPJ_T0088725.1 MGP_LPJ_G0033547.1 mouse_genomes_project 8 62908951 63327214 + MGP_LPJ_P0088725 protein_coding protein_coding MGP_LPJ_T0088726.1 MGP_LPJ_G0033547.1 mouse_genomes_project 8 62909076 62924885 + protein_coding processed_transcript MGP_LPJ_T0089884.1 MGP_LPJ_G0033902.1 mouse_genomes_project 8 97508644 97538293 - MGP_LPJ_P0089884 Got2 protein_coding protein_coding MGP_LPJ_T0089885.1 MGP_LPJ_G0033902.1 mouse_genomes_project 8 97511224 97518463 - Got2 protein_coding processed_transcript MGP_LPJ_T0088251.1 MGP_LPJ_G0033395.1 mouse_genomes_project 8 23802688 23819392 + MGP_LPJ_P0088251 protein_coding protein_coding MGP_LPJ_T0101020.1 MGP_LPJ_G0039283.1 mouse_genomes_project 8 32113179 32113323 + Gm23123 snoRNA snoRNA MGP_LPJ_T0089835.1 MGP_LPJ_G0033886.1 mouse_genomes_project 8 96679882 96701214 + MGP_LPJ_P0089835 Katnb1 protein_coding protein_coding MGP_LPJ_T0090684.1 MGP_LPJ_G0034164.1 mouse_genomes_project 8 127603389 127631952 + MGP_LPJ_P0090684 Rab4a protein_coding protein_coding MGP_LPJ_T0090685.1 MGP_LPJ_G0034164.1 mouse_genomes_project 8 127603472 127631150 + MGP_LPJ_P0090685 Rab4a protein_coding protein_coding MGP_LPJ_T0005403.1 MGP_LPJ_G0004580.1 mouse_genomes_project 8 106464684 106471484 - Gm10631 antisense antisense MGP_LPJ_T0089268.1 MGP_LPJ_G0033713.1 mouse_genomes_project 8 79200673 79206119 - MGP_LPJ_P0089268 Rbmxl1 protein_coding protein_coding MGP_LPJ_T0088372.1 MGP_LPJ_G0033442.1 mouse_genomes_project 8 32614642 32630640 + MGP_LPJ_P0088372 Saraf protein_coding protein_coding MGP_LPJ_T0087876.1 MGP_LPJ_G0033271.1 mouse_genomes_project 8 8762632 8788818 - MGP_LPJ_P0087876 Ankrd10 protein_coding protein_coding MGP_LPJ_T0087877.1 MGP_LPJ_G0033271.1 mouse_genomes_project 8 8765239 8788818 - MGP_LPJ_P0087877 Ankrd10 protein_coding protein_coding MGP_LPJ_T0088205.1 MGP_LPJ_G0033387.1 mouse_genomes_project 8 23014135 23027648 - MGP_LPJ_P0088205 Htra4 protein_coding protein_coding MGP_LPJ_T0088206.1 MGP_LPJ_G0033387.1 mouse_genomes_project 8 23018344 23026016 - Htra4 protein_coding retained_intron MGP_LPJ_T0005424.1 MGP_LPJ_G0004598.1 mouse_genomes_project 8 125465291 125466283 + Gm20406 antisense antisense MGP_LPJ_T0099755.1 MGP_LPJ_G0038018.1 mouse_genomes_project 8 25586541 25586648 - Gm24410 snRNA snRNA MGP_LPJ_T0090336.1 MGP_LPJ_G0034068.1 mouse_genomes_project 8 120145751 120151591 - Cmc2 protein_coding retained_intron MGP_LPJ_T0090337.1 MGP_LPJ_G0034068.1 mouse_genomes_project 8 120145751 120173663 - MGP_LPJ_P0090337 Cmc2 protein_coding protein_coding MGP_LPJ_T0090338.1 MGP_LPJ_G0034068.1 mouse_genomes_project 8 120146345 120173630 - MGP_LPJ_P0090338 Cmc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0090339.1 MGP_LPJ_G0034068.1 mouse_genomes_project 8 120146599 120173647 - MGP_LPJ_P0090339 Cmc2 protein_coding protein_coding MGP_LPJ_T0090340.1 MGP_LPJ_G0034068.1 mouse_genomes_project 8 120146681 120173654 - Cmc2 protein_coding processed_transcript MGP_LPJ_T0090341.1 MGP_LPJ_G0034068.1 mouse_genomes_project 8 120146698 120173573 - MGP_LPJ_P0090341 Cmc2 protein_coding protein_coding MGP_LPJ_T0090044.1 MGP_LPJ_G0033969.1 mouse_genomes_project 8 108413515 108425860 + MGP_LPJ_P0090044 Edc4 protein_coding protein_coding MGP_LPJ_T0090045.1 MGP_LPJ_G0033969.1 mouse_genomes_project 8 108413585 108425843 + MGP_LPJ_P0090045 Edc4 protein_coding protein_coding MGP_LPJ_T0090046.1 MGP_LPJ_G0033969.1 mouse_genomes_project 8 108413711 108427543 + MGP_LPJ_P0090046 Edc4 protein_coding nonsense_mediated_decay MGP_LPJ_T0090047.1 MGP_LPJ_G0033969.1 mouse_genomes_project 8 108419603 108420780 + Edc4 protein_coding retained_intron MGP_LPJ_T0090048.1 MGP_LPJ_G0033969.1 mouse_genomes_project 8 108420012 108422167 + MGP_LPJ_P0090048 Edc4 protein_coding protein_coding MGP_LPJ_T0090049.1 MGP_LPJ_G0033969.1 mouse_genomes_project 8 108420026 108421348 + MGP_LPJ_P0090049 Edc4 protein_coding protein_coding MGP_LPJ_T0090050.1 MGP_LPJ_G0033969.1 mouse_genomes_project 8 108422902 108423963 + Edc4 protein_coding retained_intron MGP_LPJ_T0009209.1 MGP_LPJ_G0007399.1 mouse_genomes_project 8 125061511 125061913 + Gm26784 lincRNA lincRNA MGP_LPJ_T0011734.1 MGP_LPJ_G0009852.1 mouse_genomes_project 8 65430383 65430526 + Gm25403 misc_RNA misc_RNA MGP_LPJ_T0088324.1 MGP_LPJ_G0033429.1 mouse_genomes_project 8 31642898 31795898 - MGP_LPJ_P0088324 Wrn protein_coding protein_coding MGP_LPJ_T0088325.1 MGP_LPJ_G0033429.1 mouse_genomes_project 8 31642898 31795898 - MGP_LPJ_P0088325 Wrn protein_coding protein_coding MGP_LPJ_T0089506.1 MGP_LPJ_G0033785.1 mouse_genomes_project 8 85939812 85943182 + MGP_LPJ_P0089506 Klf1 protein_coding protein_coding MGP_LPJ_T0088580.1 MGP_LPJ_G0033503.1 mouse_genomes_project 8 46586282 46588501 + MGP_LPJ_P0088580 protein_coding protein_coding MGP_LPJ_T0087702.1 MGP_LPJ_G0033215.1 mouse_genomes_project 8 46977 181996 - MGP_LPJ_P0087702 Insr protein_coding protein_coding MGP_LPJ_T0087703.1 MGP_LPJ_G0033215.1 mouse_genomes_project 8 106444 181930 - Insr protein_coding retained_intron MGP_LPJ_T0088586.1 MGP_LPJ_G0033505.1 mouse_genomes_project 8 46700676 46720674 + MGP_LPJ_P0088586 Rwdd4a protein_coding protein_coding MGP_LPJ_T0088587.1 MGP_LPJ_G0033505.1 mouse_genomes_project 8 46700676 46719128 + MGP_LPJ_P0088587 Rwdd4a protein_coding nonsense_mediated_decay MGP_LPJ_T0088588.1 MGP_LPJ_G0033505.1 mouse_genomes_project 8 46700698 46710902 + MGP_LPJ_P0088588 Rwdd4a protein_coding protein_coding MGP_LPJ_T0088589.1 MGP_LPJ_G0033505.1 mouse_genomes_project 8 46715756 46719139 + Rwdd4a protein_coding processed_transcript MGP_LPJ_T0088590.1 MGP_LPJ_G0033505.1 mouse_genomes_project 8 46718306 46720804 + Rwdd4a protein_coding retained_intron MGP_LPJ_T0009095.1 MGP_LPJ_G0007314.1 mouse_genomes_project 8 25287729 25295587 + lincRNA lincRNA MGP_LPJ_T0099800.1 MGP_LPJ_G0038063.1 mouse_genomes_project 8 132782390 132782497 + Gm26002 snRNA snRNA MGP_LPJ_T0011010.1 MGP_LPJ_G0009128.1 mouse_genomes_project 8 85900083 85900145 + Mir7069 miRNA miRNA MGP_LPJ_T0089274.1 MGP_LPJ_G0033716.1 mouse_genomes_project 8 79775972 79819573 + MGP_LPJ_P0089274 Zfp827 protein_coding protein_coding MGP_LPJ_T0089275.1 MGP_LPJ_G0033716.1 mouse_genomes_project 8 79775972 79941923 + MGP_LPJ_P0089275 Zfp827 protein_coding protein_coding MGP_LPJ_T0089276.1 MGP_LPJ_G0033716.1 mouse_genomes_project 8 79776119 79939036 + MGP_LPJ_P0089276 Zfp827 protein_coding protein_coding MGP_LPJ_T0089277.1 MGP_LPJ_G0033716.1 mouse_genomes_project 8 79866112 79941946 + MGP_LPJ_P0089277 Zfp827 protein_coding protein_coding MGP_LPJ_T0089278.1 MGP_LPJ_G0033716.1 mouse_genomes_project 8 79868268 79941372 + MGP_LPJ_P0089278 Zfp827 protein_coding protein_coding MGP_LPJ_T0089279.1 MGP_LPJ_G0033716.1 mouse_genomes_project 8 79924057 79939034 + MGP_LPJ_P0089279 Zfp827 protein_coding protein_coding MGP_LPJ_T0089280.1 MGP_LPJ_G0033716.1 mouse_genomes_project 8 79927222 79937941 + MGP_LPJ_P0089280 Zfp827 protein_coding protein_coding MGP_LPJ_T0087862.1 MGP_LPJ_G0033266.1 mouse_genomes_project 8 8434954 8580274 + MGP_LPJ_P0087862 Col4a2 protein_coding protein_coding MGP_LPJ_T0087863.1 MGP_LPJ_G0033266.1 mouse_genomes_project 8 8528584 8549374 + MGP_LPJ_P0087863 Col4a2 protein_coding protein_coding MGP_LPJ_T0087864.1 MGP_LPJ_G0033266.1 mouse_genomes_project 8 8572156 8574747 + Col4a2 protein_coding processed_transcript MGP_LPJ_T0101021.1 MGP_LPJ_G0039284.1 mouse_genomes_project 8 37812358 37812491 - Gm23128 snoRNA snoRNA MGP_LPJ_T0089637.1 MGP_LPJ_G0033822.1 mouse_genomes_project 8 89290037 89306344 + MGP_LPJ_P0089637 Cnep1r1 protein_coding protein_coding MGP_LPJ_T0089638.1 MGP_LPJ_G0033822.1 mouse_genomes_project 8 89290046 89302080 + Cnep1r1 protein_coding processed_transcript MGP_LPJ_T0089639.1 MGP_LPJ_G0033822.1 mouse_genomes_project 8 89290055 89306348 + MGP_LPJ_P0089639 Cnep1r1 protein_coding nonsense_mediated_decay MGP_LPJ_T0089640.1 MGP_LPJ_G0033822.1 mouse_genomes_project 8 89290068 89305718 + Cnep1r1 protein_coding retained_intron MGP_LPJ_T0089641.1 MGP_LPJ_G0033822.1 mouse_genomes_project 8 89290068 89302913 + MGP_LPJ_P0089641 Cnep1r1 protein_coding protein_coding MGP_LPJ_T0089642.1 MGP_LPJ_G0033822.1 mouse_genomes_project 8 89290075 89302296 + MGP_LPJ_P0089642 Cnep1r1 protein_coding protein_coding MGP_LPJ_T0009166.1 MGP_LPJ_G0007369.1 mouse_genomes_project 8 93259694 93266830 + Gm28511 lincRNA lincRNA MGP_LPJ_T0089534.1 MGP_LPJ_G0033790.1 mouse_genomes_project 8 86013604 86019644 + MGP_LPJ_P0089534 Prdx2 protein_coding protein_coding MGP_LPJ_T0089535.1 MGP_LPJ_G0033790.1 mouse_genomes_project 8 86013628 86019644 + MGP_LPJ_P0089535 Prdx2 protein_coding protein_coding MGP_LPJ_T0089536.1 MGP_LPJ_G0033790.1 mouse_genomes_project 8 86013636 86019630 + MGP_LPJ_P0089536 Prdx2 protein_coding unknown_likely_coding MGP_LPJ_T0089537.1 MGP_LPJ_G0033790.1 mouse_genomes_project 8 86013711 86016130 + Prdx2 protein_coding retained_intron MGP_LPJ_T0089538.1 MGP_LPJ_G0033790.1 mouse_genomes_project 8 86013711 86015145 + Prdx2 protein_coding retained_intron MGP_LPJ_T0089539.1 MGP_LPJ_G0033790.1 mouse_genomes_project 8 86013784 86019644 + MGP_LPJ_P0089539 Prdx2 protein_coding protein_coding MGP_LPJ_T0089540.1 MGP_LPJ_G0033790.1 mouse_genomes_project 8 86013874 86015648 + MGP_LPJ_P0089540 Prdx2 protein_coding protein_coding MGP_LPJ_T0089541.1 MGP_LPJ_G0033790.1 mouse_genomes_project 8 86014256 86019469 + MGP_LPJ_P0089541 Prdx2 protein_coding protein_coding MGP_LPJ_T0089542.1 MGP_LPJ_G0033790.1 mouse_genomes_project 8 86015475 86018271 + Prdx2 protein_coding retained_intron MGP_LPJ_T0089296.1 MGP_LPJ_G0033724.1 mouse_genomes_project 8 81304362 81321488 + MGP_LPJ_P0089296 Gypa protein_coding protein_coding MGP_LPJ_T0088308.1 MGP_LPJ_G0033421.1 mouse_genomes_project 8 29419802 29427326 + MGP_LPJ_P0088308 Dusp26 protein_coding protein_coding MGP_LPJ_T0088309.1 MGP_LPJ_G0033421.1 mouse_genomes_project 8 29419969 29427325 + MGP_LPJ_P0088309 Dusp26 protein_coding protein_coding MGP_LPJ_T0088310.1 MGP_LPJ_G0033421.1 mouse_genomes_project 8 29420135 29422520 + Dusp26 protein_coding retained_intron MGP_LPJ_T0088311.1 MGP_LPJ_G0033421.1 mouse_genomes_project 8 29421937 29427325 + MGP_LPJ_P0088311 Dusp26 protein_coding protein_coding MGP_LPJ_T0088312.1 MGP_LPJ_G0033421.1 mouse_genomes_project 8 29424285 29426866 + Dusp26 protein_coding processed_transcript MGP_LPJ_T0088804.1 MGP_LPJ_G0033573.1 mouse_genomes_project 8 69368218 69393459 + MGP_LPJ_P0088804 Atp6v1b2 protein_coding protein_coding MGP_LPJ_T0088805.1 MGP_LPJ_G0033573.1 mouse_genomes_project 8 69368340 69387116 + Atp6v1b2 protein_coding retained_intron MGP_LPJ_T0088806.1 MGP_LPJ_G0033573.1 mouse_genomes_project 8 69368359 69381893 + Atp6v1b2 protein_coding retained_intron MGP_LPJ_T0088807.1 MGP_LPJ_G0033573.1 mouse_genomes_project 8 69368361 69376122 + Atp6v1b2 protein_coding retained_intron MGP_LPJ_T0088808.1 MGP_LPJ_G0033573.1 mouse_genomes_project 8 69381856 69382705 + Atp6v1b2 protein_coding retained_intron MGP_LPJ_T0088809.1 MGP_LPJ_G0033573.1 mouse_genomes_project 8 69382769 69388087 + Atp6v1b2 protein_coding retained_intron MGP_LPJ_T0088765.1 MGP_LPJ_G0033563.1 mouse_genomes_project 8 66987264 67020114 + MGP_LPJ_P0088765 Naf1 protein_coding protein_coding MGP_LPJ_T0015905.1 MGP_LPJ_G0013996.1 mouse_genomes_project 8 16818481 16819319 - processed_pseudogene processed_pseudogene MGP_LPJ_T0087942.1 MGP_LPJ_G0033285.1 mouse_genomes_project 8 10313786 10343960 - MGP_LPJ_P0087942 Pcid2 protein_coding protein_coding MGP_LPJ_T0087943.1 MGP_LPJ_G0033285.1 mouse_genomes_project 8 10313786 10343960 - MGP_LPJ_P0087943 Pcid2 protein_coding nonsense_mediated_decay MGP_LPJ_T0087944.1 MGP_LPJ_G0033285.1 mouse_genomes_project 8 10316313 10323797 - Pcid2 protein_coding processed_transcript MGP_LPJ_T0087945.1 MGP_LPJ_G0033285.1 mouse_genomes_project 8 10316485 10343334 - Pcid2 protein_coding processed_transcript MGP_LPJ_T0087946.1 MGP_LPJ_G0033285.1 mouse_genomes_project 8 10322400 10337014 - MGP_LPJ_P0087946 Pcid2 protein_coding nonsense_mediated_decay MGP_LPJ_T0087947.1 MGP_LPJ_G0033285.1 mouse_genomes_project 8 10322449 10343324 - MGP_LPJ_P0087947 Pcid2 protein_coding nonsense_mediated_decay MGP_LPJ_T0009105.1 MGP_LPJ_G0007321.1 mouse_genomes_project 8 32495822 32504374 + Gm9951 lincRNA lincRNA MGP_LPJ_T0009106.1 MGP_LPJ_G0007321.1 mouse_genomes_project 8 32503147 32505581 + Gm9951 lincRNA lincRNA MGP_LPJ_T0005357.1 MGP_LPJ_G0004543.1 mouse_genomes_project 8 10130611 10148962 - Gm15351 antisense antisense MGP_LPJ_T0005358.1 MGP_LPJ_G0004543.1 mouse_genomes_project 8 10145794 10149101 - Gm15351 antisense antisense MGP_LPJ_T0005359.1 MGP_LPJ_G0004543.1 mouse_genomes_project 8 10147930 10148816 - Gm15351 antisense antisense MGP_LPJ_T0101039.1 MGP_LPJ_G0039302.1 mouse_genomes_project 8 68217119 68217250 + Gm22018 snoRNA snoRNA MGP_LPJ_T0090308.1 MGP_LPJ_G0034058.1 mouse_genomes_project 8 116722568 116732209 + MGP_LPJ_P0090308 Mon1b protein_coding protein_coding MGP_LPJ_T0090309.1 MGP_LPJ_G0034058.1 mouse_genomes_project 8 116722781 116732209 + MGP_LPJ_P0090309 Mon1b protein_coding protein_coding MGP_LPJ_T0089814.1 MGP_LPJ_G0033878.1 mouse_genomes_project 8 96424886 96441545 + MGP_LPJ_P0089814 Coq9 protein_coding protein_coding MGP_LPJ_T0089815.1 MGP_LPJ_G0033878.1 mouse_genomes_project 8 96424970 96437432 + Coq9 protein_coding retained_intron MGP_LPJ_T0089816.1 MGP_LPJ_G0033878.1 mouse_genomes_project 8 96424980 96429343 + Coq9 protein_coding retained_intron MGP_LPJ_T0089817.1 MGP_LPJ_G0033878.1 mouse_genomes_project 8 96424994 96439845 + Coq9 protein_coding retained_intron MGP_LPJ_T0089818.1 MGP_LPJ_G0033878.1 mouse_genomes_project 8 96424994 96439920 + MGP_LPJ_P0089818 Coq9 protein_coding protein_coding MGP_LPJ_T0089819.1 MGP_LPJ_G0033878.1 mouse_genomes_project 8 96436838 96437632 + Coq9 protein_coding retained_intron MGP_LPJ_T0089820.1 MGP_LPJ_G0033878.1 mouse_genomes_project 8 96440164 96440987 + Coq9 protein_coding retained_intron MGP_LPJ_T0090682.1 MGP_LPJ_G0034163.1 mouse_genomes_project 8 127437162 127439220 + Rhou protein_coding retained_intron MGP_LPJ_T0090683.1 MGP_LPJ_G0034163.1 mouse_genomes_project 8 127437162 127447098 + MGP_LPJ_P0090683 Rhou protein_coding protein_coding MGP_LPJ_T0087850.1 MGP_LPJ_G0033259.1 mouse_genomes_project 8 6222933 6818591 - MGP_LPJ_P0087850 Fam155a protein_coding protein_coding MGP_LPJ_T0009114.1 MGP_LPJ_G0007329.1 mouse_genomes_project 8 45858260 45868644 - lincRNA lincRNA MGP_LPJ_T0089909.1 MGP_LPJ_G0033915.1 mouse_genomes_project 8 106750290 106779468 - MGP_LPJ_P0089909 Dync1li2 protein_coding protein_coding MGP_LPJ_T0089942.1 MGP_LPJ_G0033926.1 mouse_genomes_project 8 107338711 107347124 + MGP_LPJ_P0089942 Ces2e protein_coding protein_coding MGP_LPJ_T0089943.1 MGP_LPJ_G0033926.1 mouse_genomes_project 8 107338711 107347124 + MGP_LPJ_P0089943 Ces2e protein_coding protein_coding MGP_LPJ_T0088461.1 MGP_LPJ_G0033471.1 mouse_genomes_project 8 40214465 40252410 - MGP_LPJ_P0088461 Asah1 protein_coding protein_coding MGP_LPJ_T0088462.1 MGP_LPJ_G0033471.1 mouse_genomes_project 8 40214927 40227271 - Asah1 protein_coding retained_intron MGP_LPJ_T0088463.1 MGP_LPJ_G0033471.1 mouse_genomes_project 8 40215593 40218137 - Asah1 protein_coding retained_intron MGP_LPJ_T0088464.1 MGP_LPJ_G0033471.1 mouse_genomes_project 8 40223413 40252272 - MGP_LPJ_P0088464 Asah1 protein_coding protein_coding MGP_LPJ_T0088465.1 MGP_LPJ_G0033471.1 mouse_genomes_project 8 40231241 40252410 - MGP_LPJ_P0088465 Asah1 protein_coding protein_coding MGP_LPJ_T0090257.1 MGP_LPJ_G0034041.1 mouse_genomes_project 8 114197172 114230969 - MGP_LPJ_P0090257 Rfwd3 protein_coding protein_coding MGP_LPJ_T0090258.1 MGP_LPJ_G0034041.1 mouse_genomes_project 8 114199249 114227685 - MGP_LPJ_P0090258 Rfwd3 protein_coding unknown_likely_coding MGP_LPJ_T0009145.1 MGP_LPJ_G0007357.1 mouse_genomes_project 8 88230164 88318912 + Gm27246 lincRNA lincRNA MGP_LPJ_T0088874.1 MGP_LPJ_G0033597.1 mouse_genomes_project 8 70381671 70409140 - MGP_LPJ_P0088874 Ncan protein_coding protein_coding MGP_LPJ_T0088649.1 MGP_LPJ_G0033528.1 mouse_genomes_project 8 56270456 56291312 + Fbxo8 protein_coding retained_intron MGP_LPJ_T0088650.1 MGP_LPJ_G0033528.1 mouse_genomes_project 8 56270628 56311765 + MGP_LPJ_P0088650 Fbxo8 protein_coding protein_coding MGP_LPJ_T0090155.1 MGP_LPJ_G0034006.1 mouse_genomes_project 8 110082326 110218197 + MGP_LPJ_P0090155 Wwp2 protein_coding protein_coding MGP_LPJ_T0089794.1 MGP_LPJ_G0033872.1 mouse_genomes_project 8 96247060 96256852 + MGP_LPJ_P0089794 Arl2bp protein_coding protein_coding MGP_LPJ_T0089795.1 MGP_LPJ_G0033872.1 mouse_genomes_project 8 96247531 96256852 + MGP_LPJ_P0089795 Arl2bp protein_coding protein_coding MGP_LPJ_T0090121.1 MGP_LPJ_G0033999.1 mouse_genomes_project 8 109652351 109656610 + MGP_LPJ_P0090121 Nip7 protein_coding protein_coding MGP_LPJ_T0090122.1 MGP_LPJ_G0033999.1 mouse_genomes_project 8 109652351 109656610 + MGP_LPJ_P0090122 Nip7 protein_coding protein_coding MGP_LPJ_T0101049.1 MGP_LPJ_G0039312.1 mouse_genomes_project 8 90940048 90940180 - Gm24212 snoRNA snoRNA MGP_LPJ_T0002367.1 MGP_LPJ_G0002274.1 mouse_genomes_project 8 124248632 124249499 + TEC TEC MGP_LPJ_T0090397.1 MGP_LPJ_G0034093.1 mouse_genomes_project 8 123145694 123172350 + MGP_LPJ_P0090397 Wfdc1 protein_coding protein_coding MGP_LPJ_T0099782.1 MGP_LPJ_G0038045.1 mouse_genomes_project 8 98923500 98923602 + Gm25160 snRNA snRNA MGP_LPJ_T0090518.1 MGP_LPJ_G0034121.1 mouse_genomes_project 8 125561054 125589652 - MGP_LPJ_P0090518 Car5a protein_coding protein_coding MGP_LPJ_T0090519.1 MGP_LPJ_G0034121.1 mouse_genomes_project 8 125562756 125572032 - Car5a protein_coding processed_transcript MGP_LPJ_T0009184.1 MGP_LPJ_G0007379.1 mouse_genomes_project 8 104733472 104748864 + lincRNA lincRNA MGP_LPJ_T0101053.1 MGP_LPJ_G0039316.1 mouse_genomes_project 8 97396981 97397114 - Gm26265 snoRNA snoRNA MGP_LPJ_T0101052.1 MGP_LPJ_G0039315.1 mouse_genomes_project 8 97396981 97397116 - Gm26265 snoRNA snoRNA MGP_LPJ_T0088828.1 MGP_LPJ_G0033582.1 mouse_genomes_project 8 70022077 70053296 - MGP_LPJ_P0088828 Gm20422 protein_coding protein_coding MGP_LPJ_T0088830.1 MGP_LPJ_G0033582.1 mouse_genomes_project 8 70022399 70045272 - MGP_LPJ_P0088830 Gm20422 protein_coding protein_coding MGP_LPJ_T0002366.1 MGP_LPJ_G0002273.1 mouse_genomes_project 8 124089870 124090705 - TEC TEC MGP_LPJ_T0009111.1 MGP_LPJ_G0007326.1 mouse_genomes_project 8 39725754 39728981 - Gm26584 lincRNA lincRNA MGP_LPJ_T0015961.1 MGP_LPJ_G0014052.1 mouse_genomes_project 8 100932274 100934978 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009168.1 MGP_LPJ_G0007371.1 mouse_genomes_project 8 93420895 93436293 + Gm28516 lincRNA lincRNA MGP_LPJ_T0090372.1 MGP_LPJ_G0034084.1 mouse_genomes_project 8 122900252 122909211 + MGP_LPJ_P0090372 Osgin1 protein_coding protein_coding MGP_LPJ_T0090373.1 MGP_LPJ_G0034084.1 mouse_genomes_project 8 122903250 122909150 + Osgin1 protein_coding processed_transcript MGP_LPJ_T0090374.1 MGP_LPJ_G0034084.1 mouse_genomes_project 8 122903295 122912390 + Osgin1 protein_coding retained_intron MGP_LPJ_T0090375.1 MGP_LPJ_G0034084.1 mouse_genomes_project 8 122903317 122911191 + Osgin1 protein_coding retained_intron MGP_LPJ_T0090376.1 MGP_LPJ_G0034084.1 mouse_genomes_project 8 122903374 122912039 + MGP_LPJ_P0090376 Osgin1 protein_coding protein_coding MGP_LPJ_T0089894.1 MGP_LPJ_G0033904.1 mouse_genomes_project 8 104693807 104713172 - MGP_LPJ_P0089894 protein_coding protein_coding MGP_LPJ_T0010985.1 MGP_LPJ_G0009103.1 mouse_genomes_project 8 46760748 46760828 + Gm27409 miRNA miRNA MGP_LPJ_T0015892.1 MGP_LPJ_G0013983.1 mouse_genomes_project 8 771289 773931 - processed_pseudogene processed_pseudogene MGP_LPJ_T0089281.1 MGP_LPJ_G0033717.1 mouse_genomes_project 8 79958587 79997621 - MGP_LPJ_P0089281 1700011L22Rik protein_coding protein_coding MGP_LPJ_T0090176.1 MGP_LPJ_G0034015.1 mouse_genomes_project 8 112494770 112514164 + MGP_LPJ_P0090176 Zfp821 protein_coding protein_coding MGP_LPJ_T0005389.1 MGP_LPJ_G0004568.1 mouse_genomes_project 8 68163042 68184320 + Gm15991 antisense antisense MGP_LPJ_T0009099.1 MGP_LPJ_G0007317.1 mouse_genomes_project 8 28877131 28886984 + 4933433F19Rik lincRNA lincRNA MGP_LPJ_T0098069.1 MGP_LPJ_G0036350.1 mouse_genomes_project 8 126265999 126266385 + pseudogene pseudogene MGP_LPJ_T0088738.1 MGP_LPJ_G0033553.1 mouse_genomes_project 8 65012095 65034743 + MGP_LPJ_P0088738 Tmem192 protein_coding protein_coding MGP_LPJ_T0088739.1 MGP_LPJ_G0033553.1 mouse_genomes_project 8 65012095 65034743 + MGP_LPJ_P0088739 Tmem192 protein_coding protein_coding MGP_LPJ_T0089182.1 MGP_LPJ_G0033682.1 mouse_genomes_project 8 72765783 72778485 + MGP_LPJ_P0089182 Hsh2d protein_coding protein_coding MGP_LPJ_T0089183.1 MGP_LPJ_G0033682.1 mouse_genomes_project 8 72770991 72778522 + MGP_LPJ_P0089183 Hsh2d protein_coding protein_coding MGP_LPJ_T0099773.1 MGP_LPJ_G0038036.1 mouse_genomes_project 8 77818036 77818208 + Gm23260 snRNA snRNA MGP_LPJ_T0089946.1 MGP_LPJ_G0033929.1 mouse_genomes_project 8 107416997 107430036 + MGP_LPJ_P0089946 Ces2h protein_coding protein_coding MGP_LPJ_T0089873.1 MGP_LPJ_G0033899.1 mouse_genomes_project 8 97353956 97354823 + Setd6 protein_coding processed_transcript MGP_LPJ_T0089874.1 MGP_LPJ_G0033899.1 mouse_genomes_project 8 97353973 97357052 + MGP_LPJ_P0089874 Setd6 protein_coding protein_coding MGP_LPJ_T0089875.1 MGP_LPJ_G0033899.1 mouse_genomes_project 8 97354203 97355279 + Setd6 protein_coding processed_transcript MGP_LPJ_T0089876.1 MGP_LPJ_G0033899.1 mouse_genomes_project 8 97354652 97356561 + Setd6 protein_coding processed_transcript MGP_LPJ_T0089877.1 MGP_LPJ_G0033899.1 mouse_genomes_project 8 97354661 97356108 + Setd6 protein_coding processed_transcript MGP_LPJ_T0089878.1 MGP_LPJ_G0033899.1 mouse_genomes_project 8 97355050 97356913 + Setd6 protein_coding processed_transcript MGP_LPJ_T0090036.1 MGP_LPJ_G0033963.1 mouse_genomes_project 8 108224707 108271155 - MGP_LPJ_P0090036 Gfod2 protein_coding protein_coding MGP_LPJ_T0090037.1 MGP_LPJ_G0033963.1 mouse_genomes_project 8 108228270 108271121 - MGP_LPJ_P0090037 Gfod2 protein_coding protein_coding MGP_LPJ_T0090038.1 MGP_LPJ_G0033963.1 mouse_genomes_project 8 108239219 108271087 - Gfod2 protein_coding processed_transcript MGP_LPJ_T0090394.1 MGP_LPJ_G0034091.1 mouse_genomes_project 8 123091957 123096138 + MGP_LPJ_P0090394 Adad2 protein_coding protein_coding MGP_LPJ_T0101046.1 MGP_LPJ_G0039309.1 mouse_genomes_project 8 85386731 85386864 - Gm23626 snoRNA snoRNA MGP_LPJ_T0087999.1 MGP_LPJ_G0033305.1 mouse_genomes_project 8 11249047 11281546 + MGP_LPJ_P0087999 Fbxo25 protein_coding protein_coding MGP_LPJ_T0088000.1 MGP_LPJ_G0033305.1 mouse_genomes_project 8 11249065 11280676 + MGP_LPJ_P0088000 Fbxo25 protein_coding unknown_likely_coding MGP_LPJ_T0002353.1 MGP_LPJ_G0002261.1 mouse_genomes_project 8 12427028 12431233 - TEC TEC MGP_LPJ_T0088250.1 MGP_LPJ_G0033394.1 mouse_genomes_project 8 23770756 23802460 - MGP_LPJ_P0088250 Ddhd2 protein_coding protein_coding MGP_LPJ_T0089560.1 MGP_LPJ_G0033798.1 mouse_genomes_project 8 86119001 86119416 - MGP_LPJ_P0089560 Gm5741 protein_coding protein_coding MGP_LPJ_T0090579.1 MGP_LPJ_G0034135.1 mouse_genomes_project 8 126253804 126296509 - MGP_LPJ_P0090579 Galns protein_coding protein_coding MGP_LPJ_T0010969.1 MGP_LPJ_G0009087.1 mouse_genomes_project 8 10376049 10376110 + Mir7065 miRNA miRNA MGP_LPJ_T0011737.1 MGP_LPJ_G0009855.1 mouse_genomes_project 8 88785042 88785397 + Gm24841 misc_RNA misc_RNA MGP_LPJ_T0090554.1 MGP_LPJ_G0034129.1 mouse_genomes_project 8 126120483 126126971 - MGP_LPJ_P0090554 Snai3 protein_coding protein_coding MGP_LPJ_T0015910.1 MGP_LPJ_G0014001.1 mouse_genomes_project 8 18702251 18702987 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018430.1 MGP_LPJ_G0015637.1 mouse_genomes_project 8 85879862 85881080 + 1700122E12Rik processed_transcript processed_transcript MGP_LPJ_T0018431.1 MGP_LPJ_G0015637.1 mouse_genomes_project 8 85880112 85880881 + 1700122E12Rik processed_transcript processed_transcript MGP_LPJ_T0090772.1 MGP_LPJ_G0034199.1 mouse_genomes_project 8 130981915 131005766 - MGP_LPJ_P0090772 Rbm34 protein_coding protein_coding MGP_LPJ_T0090086.1 MGP_LPJ_G0033982.1 mouse_genomes_project 8 108707484 108721781 + MGP_LPJ_P0090086 Pla2g15 protein_coding protein_coding MGP_LPJ_T0018423.1 MGP_LPJ_G0015634.1 mouse_genomes_project 8 72723150 72736243 - Gm16091 processed_transcript processed_transcript MGP_LPJ_T0089395.1 MGP_LPJ_G0033755.1 mouse_genomes_project 8 84997873 85005544 + Palm3 protein_coding retained_intron MGP_LPJ_T0089396.1 MGP_LPJ_G0033755.1 mouse_genomes_project 8 84997873 85006651 + MGP_LPJ_P0089396 Palm3 protein_coding protein_coding MGP_LPJ_T0089397.1 MGP_LPJ_G0033755.1 mouse_genomes_project 8 85002446 85003421 + Palm3 protein_coding retained_intron MGP_LPJ_T0101061.1 MGP_LPJ_G0039324.1 mouse_genomes_project 8 114362962 114363094 + Gm24793 snoRNA snoRNA MGP_LPJ_T0088923.1 MGP_LPJ_G0033606.1 mouse_genomes_project 8 70569948 70573592 + MGP_LPJ_P0088923 Homer3 protein_coding protein_coding MGP_LPJ_T0088924.1 MGP_LPJ_G0033606.1 mouse_genomes_project 8 70569948 70583422 + MGP_LPJ_P0088924 Homer3 protein_coding protein_coding MGP_LPJ_T0088925.1 MGP_LPJ_G0033606.1 mouse_genomes_project 8 70570120 70583422 + MGP_LPJ_P0088925 Homer3 protein_coding protein_coding MGP_LPJ_T0088926.1 MGP_LPJ_G0033606.1 mouse_genomes_project 8 70570155 70573364 + Homer3 protein_coding retained_intron MGP_LPJ_T0088927.1 MGP_LPJ_G0033606.1 mouse_genomes_project 8 70572306 70583414 + MGP_LPJ_P0088927 Homer3 protein_coding protein_coding MGP_LPJ_T0088928.1 MGP_LPJ_G0033606.1 mouse_genomes_project 8 70572992 70580801 + Homer3 protein_coding retained_intron MGP_LPJ_T0088929.1 MGP_LPJ_G0033606.1 mouse_genomes_project 8 70578226 70580666 + Homer3 protein_coding retained_intron MGP_LPJ_T0088930.1 MGP_LPJ_G0033606.1 mouse_genomes_project 8 70580137 70582531 + MGP_LPJ_P0088930 Homer3 protein_coding protein_coding MGP_LPJ_T0088195.1 MGP_LPJ_G0033384.1 mouse_genomes_project 8 22814872 22937683 - MGP_LPJ_P0088195 Adam32 protein_coding protein_coding MGP_LPJ_T0088196.1 MGP_LPJ_G0033384.1 mouse_genomes_project 8 22814875 22846463 - Adam32 protein_coding retained_intron MGP_LPJ_T0088197.1 MGP_LPJ_G0033384.1 mouse_genomes_project 8 22814875 22854615 - MGP_LPJ_P0088197 Adam32 protein_coding protein_coding MGP_LPJ_T0088198.1 MGP_LPJ_G0033384.1 mouse_genomes_project 8 22814878 22868478 - MGP_LPJ_P0088198 Adam32 protein_coding protein_coding MGP_LPJ_T0088199.1 MGP_LPJ_G0033384.1 mouse_genomes_project 8 22814878 22937674 - MGP_LPJ_P0088199 Adam32 protein_coding protein_coding MGP_LPJ_T0088200.1 MGP_LPJ_G0033384.1 mouse_genomes_project 8 22814937 22845336 - MGP_LPJ_P0088200 Adam32 protein_coding nonsense_mediated_decay MGP_LPJ_T0088201.1 MGP_LPJ_G0033384.1 mouse_genomes_project 8 22901630 22937660 - MGP_LPJ_P0088201 Adam32 protein_coding nonsense_mediated_decay MGP_LPJ_T0088202.1 MGP_LPJ_G0033384.1 mouse_genomes_project 8 22909153 22937683 - Adam32 protein_coding retained_intron MGP_LPJ_T0009185.1 MGP_LPJ_G0007380.1 mouse_genomes_project 8 107630267 107636783 + Gm3830 lincRNA lincRNA MGP_LPJ_T0089400.1 MGP_LPJ_G0033758.1 mouse_genomes_project 8 85047074 85048653 - MGP_LPJ_P0089400 Gm10643 protein_coding protein_coding MGP_LPJ_T0098068.1 MGP_LPJ_G0036349.1 mouse_genomes_project 8 126109980 126111966 + pseudogene pseudogene MGP_LPJ_T0089515.1 MGP_LPJ_G0033787.1 mouse_genomes_project 8 85949775 85978848 - MGP_LPJ_P0089515 Mast1 protein_coding protein_coding MGP_LPJ_T0089516.1 MGP_LPJ_G0033787.1 mouse_genomes_project 8 85949778 85961661 - Mast1 protein_coding retained_intron MGP_LPJ_T0089517.1 MGP_LPJ_G0033787.1 mouse_genomes_project 8 85949780 85978854 - MGP_LPJ_P0089517 Mast1 protein_coding protein_coding MGP_LPJ_T0089518.1 MGP_LPJ_G0033787.1 mouse_genomes_project 8 85949858 85990476 - MGP_LPJ_P0089518 Mast1 protein_coding unknown_likely_coding MGP_LPJ_T0089520.1 MGP_LPJ_G0033787.1 mouse_genomes_project 8 85959213 85963253 - Mast1 protein_coding retained_intron MGP_LPJ_T0089521.1 MGP_LPJ_G0033787.1 mouse_genomes_project 8 85961275 85966206 - Mast1 protein_coding retained_intron MGP_LPJ_T0089522.1 MGP_LPJ_G0033787.1 mouse_genomes_project 8 85976417 85978839 - Mast1 protein_coding retained_intron MGP_LPJ_T0011029.1 MGP_LPJ_G0009147.1 mouse_genomes_project 8 109694475 109694557 - Mir7075 miRNA miRNA MGP_LPJ_T0009169.1 MGP_LPJ_G0007372.1 mouse_genomes_project 8 93730190 93750879 - Crnde lincRNA lincRNA MGP_LPJ_T0009170.1 MGP_LPJ_G0007372.1 mouse_genomes_project 8 93730190 93760142 - Crnde lincRNA lincRNA MGP_LPJ_T0009171.1 MGP_LPJ_G0007372.1 mouse_genomes_project 8 93730190 93759853 - Crnde lincRNA lincRNA MGP_LPJ_T0009172.1 MGP_LPJ_G0007372.1 mouse_genomes_project 8 93730402 93759913 - Crnde lincRNA lincRNA MGP_LPJ_T0009173.1 MGP_LPJ_G0007372.1 mouse_genomes_project 8 93740330 93759786 - Crnde lincRNA lincRNA MGP_LPJ_T0009175.1 MGP_LPJ_G0007372.1 mouse_genomes_project 8 93748900 93750879 - Crnde lincRNA lincRNA MGP_LPJ_T0009176.1 MGP_LPJ_G0007372.1 mouse_genomes_project 8 93750939 93759891 - Crnde lincRNA lincRNA MGP_LPJ_T0011028.1 MGP_LPJ_G0009146.1 mouse_genomes_project 8 108492926 108492989 - Mir7074 miRNA miRNA MGP_LPJ_T0089965.1 MGP_LPJ_G0033935.1 mouse_genomes_project 8 107728936 107731452 - MGP_LPJ_P0089965 B3gnt9 protein_coding protein_coding MGP_LPJ_T0089966.1 MGP_LPJ_G0033935.1 mouse_genomes_project 8 107728937 107731450 - MGP_LPJ_P0089966 B3gnt9 protein_coding protein_coding MGP_LPJ_T0089967.1 MGP_LPJ_G0033935.1 mouse_genomes_project 8 107730620 107731450 - MGP_LPJ_P0089967 B3gnt9 protein_coding protein_coding MGP_LPJ_T0101027.1 MGP_LPJ_G0039290.1 mouse_genomes_project 8 46615008 46615142 + Gm22857 snoRNA snoRNA MGP_LPJ_T0005422.1 MGP_LPJ_G0004596.1 mouse_genomes_project 8 123547781 123556888 - Gm15684 antisense antisense MGP_LPJ_T0009203.1 MGP_LPJ_G0007395.1 mouse_genomes_project 8 124653274 124684412 - Fendrr lincRNA lincRNA MGP_LPJ_T0009204.1 MGP_LPJ_G0007395.1 mouse_genomes_project 8 124657195 124658806 - Fendrr lincRNA lincRNA MGP_LPJ_T0009205.1 MGP_LPJ_G0007395.1 mouse_genomes_project 8 124657511 124684490 - Fendrr lincRNA lincRNA MGP_LPJ_T0089422.1 MGP_LPJ_G0033769.1 mouse_genomes_project 8 85250900 85265730 - MGP_LPJ_P0089422 Ccdc130 protein_coding protein_coding MGP_LPJ_T0089423.1 MGP_LPJ_G0033769.1 mouse_genomes_project 8 85250909 85254513 - Ccdc130 protein_coding retained_intron MGP_LPJ_T0089424.1 MGP_LPJ_G0033769.1 mouse_genomes_project 8 85251721 85259426 - MGP_LPJ_P0089424 Ccdc130 protein_coding nonsense_mediated_decay MGP_LPJ_T0089425.1 MGP_LPJ_G0033769.1 mouse_genomes_project 8 85253002 85254752 - Ccdc130 protein_coding retained_intron MGP_LPJ_T0089426.1 MGP_LPJ_G0033769.1 mouse_genomes_project 8 85256513 85265495 - MGP_LPJ_P0089426 Ccdc130 protein_coding protein_coding MGP_LPJ_T0089427.1 MGP_LPJ_G0033769.1 mouse_genomes_project 8 85256788 85265492 - Ccdc130 protein_coding retained_intron MGP_LPJ_T0009127.1 MGP_LPJ_G0007341.1 mouse_genomes_project 8 72713022 72716458 - Gm26586 lincRNA lincRNA MGP_LPJ_T0101057.1 MGP_LPJ_G0039320.1 mouse_genomes_project 8 112632536 112632621 + Snord71 snoRNA snoRNA MGP_LPJ_T0090441.1 MGP_LPJ_G0034104.1 mouse_genomes_project 8 124131638 124141830 - Gins2 protein_coding retained_intron MGP_LPJ_T0090442.1 MGP_LPJ_G0034104.1 mouse_genomes_project 8 124131638 124142154 - MGP_LPJ_P0090442 Gins2 protein_coding protein_coding MGP_LPJ_T0090443.1 MGP_LPJ_G0034104.1 mouse_genomes_project 8 124134549 124139210 - Gins2 protein_coding retained_intron MGP_LPJ_T0090444.1 MGP_LPJ_G0034104.1 mouse_genomes_project 8 124135160 124141884 - Gins2 protein_coding processed_transcript MGP_LPJ_T0088400.1 MGP_LPJ_G0033455.1 mouse_genomes_project 8 35649637 35651564 + MGP_LPJ_P0088400 AI429214 protein_coding protein_coding MGP_LPJ_T0089823.1 MGP_LPJ_G0033880.1 mouse_genomes_project 8 96451219 96462573 - MGP_LPJ_P0089823 Dok4 protein_coding unknown_likely_coding MGP_LPJ_T0089757.1 MGP_LPJ_G0033859.1 mouse_genomes_project 8 95576473 95608390 + MGP_LPJ_P0089757 Ogfod1 protein_coding protein_coding MGP_LPJ_T0089758.1 MGP_LPJ_G0033859.1 mouse_genomes_project 8 95576513 95608390 + MGP_LPJ_P0089758 Ogfod1 protein_coding protein_coding MGP_LPJ_T0089759.1 MGP_LPJ_G0033859.1 mouse_genomes_project 8 95576535 95578727 + Ogfod1 protein_coding retained_intron MGP_LPJ_T0089760.1 MGP_LPJ_G0033859.1 mouse_genomes_project 8 95576538 95597221 + Ogfod1 protein_coding processed_transcript MGP_LPJ_T0089761.1 MGP_LPJ_G0033859.1 mouse_genomes_project 8 95576566 95608390 + MGP_LPJ_P0089761 Ogfod1 protein_coding protein_coding MGP_LPJ_T0089762.1 MGP_LPJ_G0033859.1 mouse_genomes_project 8 95576571 95595559 + Ogfod1 protein_coding processed_transcript MGP_LPJ_T0089763.1 MGP_LPJ_G0033859.1 mouse_genomes_project 8 95594506 95597222 + Ogfod1 protein_coding retained_intron MGP_LPJ_T0088436.1 MGP_LPJ_G0033466.1 mouse_genomes_project 8 39725755 39789810 + MGP_LPJ_P0088436 Slc7a2 protein_coding protein_coding MGP_LPJ_T0088437.1 MGP_LPJ_G0033466.1 mouse_genomes_project 8 39725771 39794091 + MGP_LPJ_P0088437 Slc7a2 protein_coding protein_coding MGP_LPJ_T0088438.1 MGP_LPJ_G0033466.1 mouse_genomes_project 8 39725937 39761333 + MGP_LPJ_P0088438 Slc7a2 protein_coding protein_coding MGP_LPJ_T0088439.1 MGP_LPJ_G0033466.1 mouse_genomes_project 8 39737254 39793853 + MGP_LPJ_P0088439 Slc7a2 protein_coding protein_coding MGP_LPJ_T0088440.1 MGP_LPJ_G0033466.1 mouse_genomes_project 8 39760786 39789480 + MGP_LPJ_P0088440 Slc7a2 protein_coding protein_coding MGP_LPJ_T0089675.1 MGP_LPJ_G0033832.1 mouse_genomes_project 8 90389264 90389771 - MGP_LPJ_P0089675 protein_coding protein_coding MGP_LPJ_T0088006.1 MGP_LPJ_G0033307.1 mouse_genomes_project 8 11390246 11452844 - MGP_LPJ_P0088006 Erich1 protein_coding protein_coding MGP_LPJ_T0009201.1 MGP_LPJ_G0007393.1 mouse_genomes_project 8 124464691 124466967 + Gm26878 lincRNA lincRNA MGP_LPJ_T0088764.1 MGP_LPJ_G0033562.1 mouse_genomes_project 8 66817696 66827074 + MGP_LPJ_P0088764 Npy1r protein_coding protein_coding MGP_LPJ_T0089771.1 MGP_LPJ_G0033865.1 mouse_genomes_project 8 95771246 95880144 + MGP_LPJ_P0089771 Nup93 protein_coding protein_coding MGP_LPJ_T0089772.1 MGP_LPJ_G0033865.1 mouse_genomes_project 8 95787776 95880367 + MGP_LPJ_P0089772 Nup93 protein_coding protein_coding MGP_LPJ_T0018395.1 MGP_LPJ_G0015623.1 mouse_genomes_project 8 4815603 4817669 + Gm28262 processed_transcript lincRNA MGP_LPJ_T0018396.1 MGP_LPJ_G0015623.1 mouse_genomes_project 8 4817632 4825444 + Gm28262 processed_transcript TEC MGP_LPJ_T0005376.1 MGP_LPJ_G0004556.1 mouse_genomes_project 8 39928855 39941715 + Gm16193 antisense antisense MGP_LPJ_T0101066.1 MGP_LPJ_G0039329.1 mouse_genomes_project 8 126830373 126830459 + Snord68 snoRNA snoRNA MGP_LPJ_T0005369.1 MGP_LPJ_G0004551.1 mouse_genomes_project 8 21025854 21040377 - Gm15816 antisense antisense MGP_LPJ_T0090678.1 MGP_LPJ_G0034161.1 mouse_genomes_project 8 127254399 127265119 - MGP_LPJ_P0090678 Dbndd1 protein_coding protein_coding MGP_LPJ_T0090679.1 MGP_LPJ_G0034161.1 mouse_genomes_project 8 127255368 127265054 - MGP_LPJ_P0090679 Dbndd1 protein_coding protein_coding MGP_LPJ_T0090680.1 MGP_LPJ_G0034161.1 mouse_genomes_project 8 127255368 127265127 - MGP_LPJ_P0090680 Dbndd1 protein_coding protein_coding MGP_LPJ_T0015955.1 MGP_LPJ_G0014046.1 mouse_genomes_project 8 86219807 86220032 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009152.1 MGP_LPJ_G0007363.1 mouse_genomes_project 8 88614226 88665367 + Gm2694 lincRNA lincRNA MGP_LPJ_T0009153.1 MGP_LPJ_G0007363.1 mouse_genomes_project 8 88614226 88667001 + Gm2694 lincRNA lincRNA MGP_LPJ_T0009154.1 MGP_LPJ_G0007363.1 mouse_genomes_project 8 88614226 88667002 + Gm2694 lincRNA lincRNA MGP_LPJ_T0009155.1 MGP_LPJ_G0007363.1 mouse_genomes_project 8 88614258 88667000 + Gm2694 lincRNA lincRNA MGP_LPJ_T0009156.1 MGP_LPJ_G0007363.1 mouse_genomes_project 8 88614530 88666456 + Gm2694 lincRNA lincRNA MGP_LPJ_T0009157.1 MGP_LPJ_G0007363.1 mouse_genomes_project 8 88614548 88667002 + Gm2694 lincRNA lincRNA MGP_LPJ_T0009158.1 MGP_LPJ_G0007363.1 mouse_genomes_project 8 88614571 88645694 + Gm2694 lincRNA lincRNA MGP_LPJ_T0088737.1 MGP_LPJ_G0033552.1 mouse_genomes_project 8 64798906 64912504 - MGP_LPJ_P0088737 Klhl2 protein_coding protein_coding MGP_LPJ_T0005408.1 MGP_LPJ_G0004583.1 mouse_genomes_project 8 108474164 108485673 + Gm16156 antisense antisense MGP_LPJ_T0087714.1 MGP_LPJ_G0033219.1 mouse_genomes_project 8 385372 408565 + MGP_LPJ_P0087714 1700019B03Rik protein_coding protein_coding MGP_LPJ_T0087715.1 MGP_LPJ_G0033219.1 mouse_genomes_project 8 385372 408565 + MGP_LPJ_P0087715 1700019B03Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0087716.1 MGP_LPJ_G0033219.1 mouse_genomes_project 8 393880 408568 + MGP_LPJ_P0087716 1700019B03Rik protein_coding protein_coding MGP_LPJ_T0090629.1 MGP_LPJ_G0034152.1 mouse_genomes_project 8 126976612 126988475 - Vps9d1 protein_coding retained_intron MGP_LPJ_T0090630.1 MGP_LPJ_G0034152.1 mouse_genomes_project 8 126976612 126988429 - MGP_LPJ_P0090630 Vps9d1 protein_coding protein_coding MGP_LPJ_T0090631.1 MGP_LPJ_G0034152.1 mouse_genomes_project 8 126976612 126988616 - MGP_LPJ_P0090631 Vps9d1 protein_coding protein_coding MGP_LPJ_T0090632.1 MGP_LPJ_G0034152.1 mouse_genomes_project 8 126976614 126988416 - Vps9d1 protein_coding retained_intron MGP_LPJ_T0090633.1 MGP_LPJ_G0034152.1 mouse_genomes_project 8 126976614 126988362 - MGP_LPJ_P0090633 Vps9d1 protein_coding nonsense_mediated_decay MGP_LPJ_T0090634.1 MGP_LPJ_G0034152.1 mouse_genomes_project 8 126976615 126988345 - MGP_LPJ_P0090634 Vps9d1 protein_coding protein_coding MGP_LPJ_T0090635.1 MGP_LPJ_G0034152.1 mouse_genomes_project 8 126979203 126988358 - Vps9d1 protein_coding retained_intron MGP_LPJ_T0090636.1 MGP_LPJ_G0034152.1 mouse_genomes_project 8 126979399 126981187 - Vps9d1 protein_coding processed_transcript MGP_LPJ_T0090637.1 MGP_LPJ_G0034152.1 mouse_genomes_project 8 126980772 126982253 - Vps9d1 protein_coding processed_transcript MGP_LPJ_T0090638.1 MGP_LPJ_G0034152.1 mouse_genomes_project 8 126981113 126982270 - Vps9d1 protein_coding retained_intron MGP_LPJ_T0090639.1 MGP_LPJ_G0034152.1 mouse_genomes_project 8 126982809 126983240 - Vps9d1 protein_coding retained_intron MGP_LPJ_T0090640.1 MGP_LPJ_G0034152.1 mouse_genomes_project 8 126983084 126985317 - Vps9d1 protein_coding retained_intron MGP_LPJ_T0090641.1 MGP_LPJ_G0034152.1 mouse_genomes_project 8 126983957 126988303 - Vps9d1 protein_coding retained_intron MGP_LPJ_T0089032.1 MGP_LPJ_G0033639.1 mouse_genomes_project 8 71188750 71191050 + MGP_LPJ_P0089032 protein_coding protein_coding MGP_LPJ_T0009129.1 MGP_LPJ_G0007343.1 mouse_genomes_project 8 75161631 75400229 - lincRNA lincRNA MGP_LPJ_T0009130.1 MGP_LPJ_G0007343.1 mouse_genomes_project 8 75393097 75400202 - lincRNA lincRNA MGP_LPJ_T0088490.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44572224 44911921 + MGP_LPJ_P0088490 Sorbs2 protein_coding protein_coding MGP_LPJ_T0088491.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44572230 44859152 + Sorbs2 protein_coding retained_intron MGP_LPJ_T0088492.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44572234 44876032 + MGP_LPJ_P0088492 Sorbs2 protein_coding protein_coding MGP_LPJ_T0088493.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44572254 44857683 + MGP_LPJ_P0088493 Sorbs2 protein_coding protein_coding MGP_LPJ_T0088494.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44700378 44823595 + MGP_LPJ_P0088494 Sorbs2 protein_coding protein_coding MGP_LPJ_T0088495.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44700605 44823617 + MGP_LPJ_P0088495 Sorbs2 protein_coding protein_coding MGP_LPJ_T0088496.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44700818 44723046 + Sorbs2 protein_coding processed_transcript MGP_LPJ_T0088497.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44700834 44824420 + MGP_LPJ_P0088497 Sorbs2 protein_coding protein_coding MGP_LPJ_T0088498.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44732928 44903713 + MGP_LPJ_P0088498 Sorbs2 protein_coding protein_coding MGP_LPJ_T0088499.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44733306 44857683 + MGP_LPJ_P0088499 Sorbs2 protein_coding protein_coding MGP_LPJ_T0088500.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44733312 44911918 + MGP_LPJ_P0088500 Sorbs2 protein_coding protein_coding MGP_LPJ_T0088501.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44733332 44823454 + Sorbs2 protein_coding retained_intron MGP_LPJ_T0088502.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44733345 44824377 + MGP_LPJ_P0088502 Sorbs2 protein_coding protein_coding MGP_LPJ_T0088503.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44733420 44820207 + Sorbs2 protein_coding retained_intron MGP_LPJ_T0088504.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44733440 44853465 + MGP_LPJ_P0088504 Sorbs2 protein_coding protein_coding MGP_LPJ_T0088505.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44736629 44836764 + MGP_LPJ_P0088505 Sorbs2 protein_coding protein_coding MGP_LPJ_T0088506.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44763883 44836813 + MGP_LPJ_P0088506 Sorbs2 protein_coding protein_coding MGP_LPJ_T0088507.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44763887 44836773 + MGP_LPJ_P0088507 Sorbs2 protein_coding protein_coding MGP_LPJ_T0088508.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44808828 44911927 + MGP_LPJ_P0088508 Sorbs2 protein_coding protein_coding MGP_LPJ_T0088509.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44842880 44911919 + MGP_LPJ_P0088509 Sorbs2 protein_coding protein_coding MGP_LPJ_T0088510.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44843614 44880358 + Sorbs2 protein_coding processed_transcript MGP_LPJ_T0088511.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44850650 44873507 + MGP_LPJ_P0088511 Sorbs2 protein_coding protein_coding MGP_LPJ_T0088512.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44851366 44873475 + MGP_LPJ_P0088512 Sorbs2 protein_coding protein_coding MGP_LPJ_T0088513.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44853165 44856704 + Sorbs2 protein_coding retained_intron MGP_LPJ_T0088514.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44856480 44875706 + MGP_LPJ_P0088514 Sorbs2 protein_coding protein_coding MGP_LPJ_T0088515.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44884905 44885617 + Sorbs2 protein_coding retained_intron MGP_LPJ_T0088516.1 MGP_LPJ_G0033485.1 mouse_genomes_project 8 44887501 44889939 + Sorbs2 protein_coding processed_transcript MGP_LPJ_T0089714.1 MGP_LPJ_G0033845.1 mouse_genomes_project 8 94343607 94344608 + MGP_LPJ_P0089714 Capns2 protein_coding protein_coding MGP_LPJ_T0088376.1 MGP_LPJ_G0033446.1 mouse_genomes_project 8 33939190 33952584 + MGP_LPJ_P0088376 Ppp1r3b protein_coding protein_coding MGP_LPJ_T0088170.1 MGP_LPJ_G0033377.1 mouse_genomes_project 8 22133983 22146579 + MGP_LPJ_P0088170 protein_coding protein_coding MGP_LPJ_T0009189.1 MGP_LPJ_G0007383.1 mouse_genomes_project 8 108843840 108862111 + Gm10629 lincRNA lincRNA MGP_LPJ_T0090468.1 MGP_LPJ_G0034110.1 mouse_genomes_project 8 124687771 124691530 + MGP_LPJ_P0090468 Foxf1 protein_coding protein_coding MGP_LPJ_T0088696.1 MGP_LPJ_G0033542.1 mouse_genomes_project 8 61097364 61276987 + MGP_LPJ_P0088696 Sh3rf1 protein_coding protein_coding MGP_LPJ_T0089470.1 MGP_LPJ_G0033775.1 mouse_genomes_project 8 85728588 85731846 + MGP_LPJ_P0089470 Lyl1 protein_coding protein_coding MGP_LPJ_T0009138.1 MGP_LPJ_G0007350.1 mouse_genomes_project 8 85178277 85187338 - lincRNA lincRNA MGP_LPJ_T0088094.1 MGP_LPJ_G0033350.1 mouse_genomes_project 8 19812573 19816829 + MGP_LPJ_P0088094 Ccdc70 protein_coding protein_coding MGP_LPJ_T0088095.1 MGP_LPJ_G0033350.1 mouse_genomes_project 8 19813398 19816853 + MGP_LPJ_P0088095 Ccdc70 protein_coding protein_coding MGP_LPJ_T0090293.1 MGP_LPJ_G0034052.1 mouse_genomes_project 8 114900354 114923071 - MGP_LPJ_P0090293 Tmem231 protein_coding protein_coding MGP_LPJ_T0089176.1 MGP_LPJ_G0033679.1 mouse_genomes_project 8 72680895 72685368 + MGP_LPJ_P0089176 Olfr374 protein_coding protein_coding MGP_LPJ_T0090147.1 MGP_LPJ_G0034005.1 mouse_genomes_project 8 110055080 110067668 - MGP_LPJ_P0090147 Nob1 protein_coding protein_coding MGP_LPJ_T0090148.1 MGP_LPJ_G0034005.1 mouse_genomes_project 8 110055086 110064163 - Nob1 protein_coding retained_intron MGP_LPJ_T0090149.1 MGP_LPJ_G0034005.1 mouse_genomes_project 8 110055086 110067654 - MGP_LPJ_P0090149 Nob1 protein_coding nonsense_mediated_decay MGP_LPJ_T0090150.1 MGP_LPJ_G0034005.1 mouse_genomes_project 8 110058838 110067599 - Nob1 protein_coding retained_intron MGP_LPJ_T0090151.1 MGP_LPJ_G0034005.1 mouse_genomes_project 8 110060295 110067664 - Nob1 protein_coding retained_intron MGP_LPJ_T0090152.1 MGP_LPJ_G0034005.1 mouse_genomes_project 8 110060656 110064928 - Nob1 protein_coding processed_transcript MGP_LPJ_T0090153.1 MGP_LPJ_G0034005.1 mouse_genomes_project 8 110060754 110061267 - Nob1 protein_coding retained_intron MGP_LPJ_T0090154.1 MGP_LPJ_G0034005.1 mouse_genomes_project 8 110060950 110067639 - MGP_LPJ_P0090154 Nob1 protein_coding nonsense_mediated_decay MGP_LPJ_T0088795.1 MGP_LPJ_G0033571.1 mouse_genomes_project 8 69110604 69136873 + MGP_LPJ_P0088795 Lpl protein_coding protein_coding MGP_LPJ_T0088796.1 MGP_LPJ_G0033571.1 mouse_genomes_project 8 69110668 69137386 + MGP_LPJ_P0088796 Lpl protein_coding nonsense_mediated_decay MGP_LPJ_T0088797.1 MGP_LPJ_G0033571.1 mouse_genomes_project 8 69110770 69119991 + Lpl protein_coding retained_intron MGP_LPJ_T0088798.1 MGP_LPJ_G0033571.1 mouse_genomes_project 8 69121063 69126137 + Lpl protein_coding processed_transcript MGP_LPJ_T0015904.1 MGP_LPJ_G0013995.1 mouse_genomes_project 8 16140979 16141354 - processed_pseudogene processed_pseudogene MGP_LPJ_T0087989.1 MGP_LPJ_G0033300.1 mouse_genomes_project 8 11047558 11073116 + MGP_LPJ_P0087989 Cdc16 protein_coding protein_coding MGP_LPJ_T0087990.1 MGP_LPJ_G0033300.1 mouse_genomes_project 8 11047559 11052981 + Cdc16 protein_coding processed_transcript MGP_LPJ_T0087991.1 MGP_LPJ_G0033300.1 mouse_genomes_project 8 11047597 11057751 + Cdc16 protein_coding processed_transcript MGP_LPJ_T0087992.1 MGP_LPJ_G0033300.1 mouse_genomes_project 8 11048643 11052984 + Cdc16 protein_coding retained_intron MGP_LPJ_T0087993.1 MGP_LPJ_G0033300.1 mouse_genomes_project 8 11070199 11073116 + Cdc16 protein_coding retained_intron MGP_LPJ_T0089108.1 MGP_LPJ_G0033661.1 mouse_genomes_project 8 71936977 71941548 - MGP_LPJ_P0089108 Tmem221 protein_coding protein_coding MGP_LPJ_T0089029.1 MGP_LPJ_G0033638.1 mouse_genomes_project 8 71165398 71180216 - MGP_LPJ_P0089029 Kcnn1 protein_coding protein_coding MGP_LPJ_T0089030.1 MGP_LPJ_G0033638.1 mouse_genomes_project 8 71165398 71180216 - MGP_LPJ_P0089030 Kcnn1 protein_coding protein_coding MGP_LPJ_T0089031.1 MGP_LPJ_G0033638.1 mouse_genomes_project 8 71167680 71188678 - MGP_LPJ_P0089031 Kcnn1 protein_coding unknown_likely_coding MGP_LPJ_T0018393.1 MGP_LPJ_G0015622.1 mouse_genomes_project 8 1063263 1108735 - 4932443L11Rik processed_transcript processed_transcript MGP_LPJ_T0018394.1 MGP_LPJ_G0015622.1 mouse_genomes_project 8 1080041 1108140 - 4932443L11Rik processed_transcript processed_transcript MGP_LPJ_T0088667.1 MGP_LPJ_G0033535.1 mouse_genomes_project 8 58699607 58702154 + MGP_LPJ_P0088667 BC030500 protein_coding protein_coding MGP_LPJ_T0088668.1 MGP_LPJ_G0033535.1 mouse_genomes_project 8 58700109 58701049 + MGP_LPJ_P0088668 BC030500 protein_coding protein_coding MGP_LPJ_T0101022.1 MGP_LPJ_G0039285.1 mouse_genomes_project 8 37812359 37812491 - Gm23128 snoRNA snoRNA MGP_LPJ_T0088108.1 MGP_LPJ_G0033356.1 mouse_genomes_project 8 20033624 20062158 + MGP_LPJ_P0088108 Vps36 protein_coding protein_coding MGP_LPJ_T0088109.1 MGP_LPJ_G0033356.1 mouse_genomes_project 8 20033657 20047645 + Vps36 protein_coding processed_transcript MGP_LPJ_T0088110.1 MGP_LPJ_G0033356.1 mouse_genomes_project 8 20057887 20059527 + Vps36 protein_coding retained_intron MGP_LPJ_T0005367.1 MGP_LPJ_G0004550.1 mouse_genomes_project 8 20664298 20668075 + 1700041G16Rik antisense antisense MGP_LPJ_T0005368.1 MGP_LPJ_G0004550.1 mouse_genomes_project 8 20666816 20667274 + 1700041G16Rik antisense antisense MGP_LPJ_T0088317.1 MGP_LPJ_G0033424.1 mouse_genomes_project 8 29491433 29502219 - MGP_LPJ_P0088317 Mak16 protein_coding protein_coding MGP_LPJ_T0088295.1 MGP_LPJ_G0033413.1 mouse_genomes_project 8 25344707 25349789 - MGP_LPJ_P0088295 Got1l1 protein_coding protein_coding MGP_LPJ_T0089796.1 MGP_LPJ_G0033873.1 mouse_genomes_project 8 96257329 96278638 - MGP_LPJ_P0089796 Pllp protein_coding protein_coding MGP_LPJ_T0088472.1 MGP_LPJ_G0033478.1 mouse_genomes_project 8 43980138 44097989 + MGP_LPJ_P0088472 Fat1 protein_coding unknown_likely_coding MGP_LPJ_T0088473.1 MGP_LPJ_G0033478.1 mouse_genomes_project 8 43980363 44098837 + MGP_LPJ_P0088473 Fat1 protein_coding protein_coding MGP_LPJ_T0088474.1 MGP_LPJ_G0033478.1 mouse_genomes_project 8 43995104 44098837 + MGP_LPJ_P0088474 Fat1 protein_coding protein_coding MGP_LPJ_T0088475.1 MGP_LPJ_G0033478.1 mouse_genomes_project 8 44079937 44098825 + MGP_LPJ_P0088475 Fat1 protein_coding protein_coding MGP_LPJ_T0088476.1 MGP_LPJ_G0033478.1 mouse_genomes_project 8 44091112 44097411 + MGP_LPJ_P0088476 Fat1 protein_coding nonsense_mediated_decay MGP_LPJ_T0088477.1 MGP_LPJ_G0033478.1 mouse_genomes_project 8 44091112 44097411 + MGP_LPJ_P0088477 Fat1 protein_coding protein_coding MGP_LPJ_T0088478.1 MGP_LPJ_G0033478.1 mouse_genomes_project 8 44091714 44097080 + Fat1 protein_coding retained_intron MGP_LPJ_T0089177.1 MGP_LPJ_G0033680.1 mouse_genomes_project 8 72710622 72720339 + Tpm4 protein_coding processed_transcript MGP_LPJ_T0089178.1 MGP_LPJ_G0033680.1 mouse_genomes_project 8 72710906 72728490 + MGP_LPJ_P0089178 Tpm4 protein_coding protein_coding MGP_LPJ_T0089171.1 MGP_LPJ_G0033676.1 mouse_genomes_project 8 72448937 72469953 - MGP_LPJ_P0089171 Cyp4f18 protein_coding protein_coding MGP_LPJ_T0089172.1 MGP_LPJ_G0033676.1 mouse_genomes_project 8 72448938 72453370 - Cyp4f18 protein_coding processed_transcript MGP_LPJ_T0089173.1 MGP_LPJ_G0033676.1 mouse_genomes_project 8 72450010 72453685 - Cyp4f18 protein_coding processed_transcript MGP_LPJ_T0089257.1 MGP_LPJ_G0033710.1 mouse_genomes_project 8 78313147 78384771 - MGP_LPJ_P0089257 Ednra protein_coding protein_coding MGP_LPJ_T0089258.1 MGP_LPJ_G0033710.1 mouse_genomes_project 8 78319805 78384799 - Ednra protein_coding retained_intron MGP_LPJ_T0090269.1 MGP_LPJ_G0034045.1 mouse_genomes_project 8 114483721 114577001 + MGP_LPJ_P0090269 Znrf1 protein_coding protein_coding MGP_LPJ_T0090270.1 MGP_LPJ_G0034045.1 mouse_genomes_project 8 114484071 114577311 + MGP_LPJ_P0090270 Znrf1 protein_coding protein_coding MGP_LPJ_T0090271.1 MGP_LPJ_G0034045.1 mouse_genomes_project 8 114484071 114577311 + MGP_LPJ_P0090271 Znrf1 protein_coding protein_coding MGP_LPJ_T0090272.1 MGP_LPJ_G0034045.1 mouse_genomes_project 8 114484273 114575059 + MGP_LPJ_P0090272 Znrf1 protein_coding protein_coding MGP_LPJ_T0090273.1 MGP_LPJ_G0034045.1 mouse_genomes_project 8 114484551 114574254 + MGP_LPJ_P0090273 Znrf1 protein_coding protein_coding MGP_LPJ_T0090274.1 MGP_LPJ_G0034045.1 mouse_genomes_project 8 114484701 114572934 + MGP_LPJ_P0090274 Znrf1 protein_coding protein_coding MGP_LPJ_T0090275.1 MGP_LPJ_G0034045.1 mouse_genomes_project 8 114484894 114573217 + MGP_LPJ_P0090275 Znrf1 protein_coding protein_coding MGP_LPJ_T0090276.1 MGP_LPJ_G0034045.1 mouse_genomes_project 8 114484918 114573782 + MGP_LPJ_P0090276 Znrf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0090277.1 MGP_LPJ_G0034045.1 mouse_genomes_project 8 114485774 114573852 + MGP_LPJ_P0090277 Znrf1 protein_coding protein_coding MGP_LPJ_T0090278.1 MGP_LPJ_G0034045.1 mouse_genomes_project 8 114485774 114577311 + MGP_LPJ_P0090278 Znrf1 protein_coding protein_coding MGP_LPJ_T0090279.1 MGP_LPJ_G0034045.1 mouse_genomes_project 8 114485896 114558182 + Znrf1 protein_coding processed_transcript MGP_LPJ_T0090280.1 MGP_LPJ_G0034045.1 mouse_genomes_project 8 114488688 114572945 + MGP_LPJ_P0090280 Znrf1 protein_coding protein_coding MGP_LPJ_T0090281.1 MGP_LPJ_G0034045.1 mouse_genomes_project 8 114509066 114555614 + Znrf1 protein_coding processed_transcript MGP_LPJ_T0090282.1 MGP_LPJ_G0034045.1 mouse_genomes_project 8 114555565 114574243 + MGP_LPJ_P0090282 Znrf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0090283.1 MGP_LPJ_G0034045.1 mouse_genomes_project 8 114558113 114573056 + MGP_LPJ_P0090283 Znrf1 protein_coding protein_coding MGP_LPJ_T0088305.1 MGP_LPJ_G0033419.1 mouse_genomes_project 8 25618388 25656850 + MGP_LPJ_P0088305 protein_coding protein_coding MGP_LPJ_T0005390.1 MGP_LPJ_G0004569.1 mouse_genomes_project 8 68597984 68601838 + 1700125H03Rik antisense antisense MGP_LPJ_T0005391.1 MGP_LPJ_G0004569.1 mouse_genomes_project 8 68598016 68605255 + 1700125H03Rik antisense antisense MGP_LPJ_T0089708.1 MGP_LPJ_G0033841.1 mouse_genomes_project 8 93761818 93765285 + MGP_LPJ_P0089708 Irx5 protein_coding protein_coding MGP_LPJ_T0005381.1 MGP_LPJ_G0004561.1 mouse_genomes_project 8 54213094 54246526 - 5330439A09Rik antisense antisense MGP_LPJ_T0015902.1 MGP_LPJ_G0013993.1 mouse_genomes_project 8 11502799 11503405 + processed_pseudogene processed_pseudogene MGP_LPJ_T0089972.1 MGP_LPJ_G0033937.1 mouse_genomes_project 8 107741089 107745768 + MGP_LPJ_P0089972 Fbxl8 protein_coding protein_coding MGP_LPJ_T0089973.1 MGP_LPJ_G0033937.1 mouse_genomes_project 8 107741123 107745612 + MGP_LPJ_P0089973 Fbxl8 protein_coding nonsense_mediated_decay MGP_LPJ_T0090765.1 MGP_LPJ_G0034192.1 mouse_genomes_project 8 129852103 129889071 + MGP_LPJ_P0090765 BC021891 protein_coding protein_coding MGP_LPJ_T0089237.1 MGP_LPJ_G0033705.1 mouse_genomes_project 8 76038385 76544080 + MGP_LPJ_P0089237 1700007B14Rik protein_coding protein_coding MGP_LPJ_T0089238.1 MGP_LPJ_G0033705.1 mouse_genomes_project 8 76038674 76544105 + MGP_LPJ_P0089238 1700007B14Rik protein_coding protein_coding MGP_LPJ_T0088833.1 MGP_LPJ_G0033585.1 mouse_genomes_project 8 70084301 70097503 + MGP_LPJ_P0088833 Gmip protein_coding protein_coding MGP_LPJ_T0088834.1 MGP_LPJ_G0033585.1 mouse_genomes_project 8 70084312 70094615 + MGP_LPJ_P0088834 Gmip protein_coding protein_coding MGP_LPJ_T0088835.1 MGP_LPJ_G0033585.1 mouse_genomes_project 8 70086147 70089506 + Gmip protein_coding processed_transcript MGP_LPJ_T0088836.1 MGP_LPJ_G0033585.1 mouse_genomes_project 8 70086303 70087280 + Gmip protein_coding processed_transcript MGP_LPJ_T0088837.1 MGP_LPJ_G0033585.1 mouse_genomes_project 8 70088916 70089754 + Gmip protein_coding retained_intron MGP_LPJ_T0088838.1 MGP_LPJ_G0033585.1 mouse_genomes_project 8 70089537 70091885 + Gmip protein_coding processed_transcript MGP_LPJ_T0088839.1 MGP_LPJ_G0033585.1 mouse_genomes_project 8 70092348 70093235 + Gmip protein_coding retained_intron MGP_LPJ_T0088840.1 MGP_LPJ_G0033585.1 mouse_genomes_project 8 70093468 70094620 + MGP_LPJ_P0088840 Gmip protein_coding protein_coding MGP_LPJ_T0088841.1 MGP_LPJ_G0033585.1 mouse_genomes_project 8 70093704 70096960 + Gmip protein_coding processed_transcript MGP_LPJ_T0009116.1 MGP_LPJ_G0007331.1 mouse_genomes_project 8 56392595 56393932 + lincRNA lincRNA MGP_LPJ_T0088203.1 MGP_LPJ_G0033385.1 mouse_genomes_project 8 22939071 23006108 - MGP_LPJ_P0088203 Adam9 protein_coding protein_coding MGP_LPJ_T0009162.1 MGP_LPJ_G0007367.1 mouse_genomes_project 8 89347549 89348018 + 9430002A10Rik lincRNA lincRNA MGP_LPJ_T0009163.1 MGP_LPJ_G0007367.1 mouse_genomes_project 8 89347549 89348024 + 9430002A10Rik lincRNA lincRNA MGP_LPJ_T0088405.1 MGP_LPJ_G0033458.1 mouse_genomes_project 8 38388642 38455071 - MGP_LPJ_P0088405 Msr1 protein_coding protein_coding MGP_LPJ_T0088406.1 MGP_LPJ_G0033458.1 mouse_genomes_project 8 38411392 38455071 - MGP_LPJ_P0088406 Msr1 protein_coding protein_coding MGP_LPJ_T0089234.1 MGP_LPJ_G0033703.1 mouse_genomes_project 8 75696293 75715379 + MGP_LPJ_P0089234 Mcm5 protein_coding protein_coding MGP_LPJ_T0011007.1 MGP_LPJ_G0009125.1 mouse_genomes_project 8 85198165 85198252 + Mir27a miRNA miRNA MGP_LPJ_T0088637.1 MGP_LPJ_G0033524.1 mouse_genomes_project 8 55574317 55613941 - MGP_LPJ_P0088637 Adam29 protein_coding protein_coding MGP_LPJ_T0101011.1 MGP_LPJ_G0039274.1 mouse_genomes_project 8 15731633 15731743 - Gm25665 snoRNA snoRNA MGP_LPJ_T0090123.1 MGP_LPJ_G0034000.1 mouse_genomes_project 8 109657135 109662827 - MGP_LPJ_P0090123 Tmed6 protein_coding protein_coding MGP_LPJ_T0087725.1 MGP_LPJ_G0033222.1 mouse_genomes_project 8 439701 468358 + MGP_LPJ_P0087725 Pnpla6 protein_coding protein_coding MGP_LPJ_T0087726.1 MGP_LPJ_G0033222.1 mouse_genomes_project 8 439701 468358 + MGP_LPJ_P0087726 Pnpla6 protein_coding protein_coding MGP_LPJ_T0087727.1 MGP_LPJ_G0033222.1 mouse_genomes_project 8 439745 462323 + MGP_LPJ_P0087727 Pnpla6 protein_coding unknown_likely_coding MGP_LPJ_T0088107.1 MGP_LPJ_G0033355.1 mouse_genomes_project 8 20009036 20026720 - MGP_LPJ_P0088107 Ckap2 protein_coding protein_coding MGP_LPJ_T0005432.1 MGP_LPJ_G0004605.1 mouse_genomes_project 8 129134217 129137142 - Gm16237 antisense antisense MGP_LPJ_T0089676.1 MGP_LPJ_G0033833.1 mouse_genomes_project 8 91534412 91641725 - MGP_LPJ_P0089676 Tox3 protein_coding protein_coding MGP_LPJ_T0089677.1 MGP_LPJ_G0033833.1 mouse_genomes_project 8 91540089 91641513 - MGP_LPJ_P0089677 Tox3 protein_coding protein_coding MGP_LPJ_T0089678.1 MGP_LPJ_G0033833.1 mouse_genomes_project 8 91544948 91641508 - MGP_LPJ_P0089678 Tox3 protein_coding protein_coding MGP_LPJ_T0088572.1 MGP_LPJ_G0033500.1 mouse_genomes_project 8 45868873 45983843 + MGP_LPJ_P0088572 Irf2 protein_coding protein_coding MGP_LPJ_T0101411.1 MGP_LPJ_G0039587.1 mouse_genomes_project 8 72352795 72356084 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101412.1 MGP_LPJ_G0039587.1 mouse_genomes_project 8 72354435 72355058 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0011008.1 MGP_LPJ_G0009126.1 mouse_genomes_project 8 85198308 85198415 + Mir24-2 miRNA miRNA MGP_LPJ_T0088230.1 MGP_LPJ_G0033392.1 mouse_genomes_project 8 23642541 23720769 + MGP_LPJ_P0088230 Whsc1l1 protein_coding protein_coding MGP_LPJ_T0088231.1 MGP_LPJ_G0033392.1 mouse_genomes_project 8 23643224 23718467 + Whsc1l1 protein_coding retained_intron MGP_LPJ_T0088232.1 MGP_LPJ_G0033392.1 mouse_genomes_project 8 23643224 23764411 + MGP_LPJ_P0088232 Whsc1l1 protein_coding protein_coding MGP_LPJ_T0088233.1 MGP_LPJ_G0033392.1 mouse_genomes_project 8 23643224 23721527 + MGP_LPJ_P0088233 Whsc1l1 protein_coding protein_coding MGP_LPJ_T0088234.1 MGP_LPJ_G0033392.1 mouse_genomes_project 8 23643224 23759712 + MGP_LPJ_P0088234 Whsc1l1 protein_coding protein_coding MGP_LPJ_T0088235.1 MGP_LPJ_G0033392.1 mouse_genomes_project 8 23643259 23707159 + Whsc1l1 protein_coding retained_intron MGP_LPJ_T0088236.1 MGP_LPJ_G0033392.1 mouse_genomes_project 8 23683230 23764411 + MGP_LPJ_P0088236 Whsc1l1 protein_coding protein_coding MGP_LPJ_T0088237.1 MGP_LPJ_G0033392.1 mouse_genomes_project 8 23717995 23721505 + Whsc1l1 protein_coding retained_intron MGP_LPJ_T0088238.1 MGP_LPJ_G0033392.1 mouse_genomes_project 8 23738693 23759712 + MGP_LPJ_P0088238 Whsc1l1 protein_coding protein_coding MGP_LPJ_T0088239.1 MGP_LPJ_G0033392.1 mouse_genomes_project 8 23743036 23753491 + Whsc1l1 protein_coding retained_intron MGP_LPJ_T0088240.1 MGP_LPJ_G0033392.1 mouse_genomes_project 8 23744466 23745493 + Whsc1l1 protein_coding retained_intron MGP_LPJ_T0088211.1 MGP_LPJ_G0033389.1 mouse_genomes_project 8 23148078 23196507 - MGP_LPJ_P0088211 Tacc1 protein_coding protein_coding MGP_LPJ_T0088212.1 MGP_LPJ_G0033389.1 mouse_genomes_project 8 23148078 23196507 - MGP_LPJ_P0088212 Tacc1 protein_coding protein_coding MGP_LPJ_T0088088.1 MGP_LPJ_G0033344.1 mouse_genomes_project 8 19693295 19700481 - MGP_LPJ_P0088088 Defb9 protein_coding protein_coding MGP_LPJ_T0090069.1 MGP_LPJ_G0033979.1 mouse_genomes_project 8 108554895 108557157 - MGP_LPJ_P0090069 Ddx28 protein_coding protein_coding MGP_LPJ_T0018444.1 MGP_LPJ_G0015644.1 mouse_genomes_project 8 114038974 114055575 - 9430091E24Rik processed_transcript processed_transcript MGP_LPJ_T0018445.1 MGP_LPJ_G0015644.1 mouse_genomes_project 8 114039164 114055596 - 9430091E24Rik processed_transcript processed_transcript MGP_LPJ_T0090263.1 MGP_LPJ_G0034043.1 mouse_genomes_project 8 114285016 114306295 - Fa2h protein_coding processed_transcript MGP_LPJ_T0090264.1 MGP_LPJ_G0034043.1 mouse_genomes_project 8 114285022 114335237 - MGP_LPJ_P0090264 Fa2h protein_coding protein_coding MGP_LPJ_T0090265.1 MGP_LPJ_G0034043.1 mouse_genomes_project 8 114285646 114287939 - Fa2h protein_coding processed_transcript MGP_LPJ_T0090266.1 MGP_LPJ_G0034043.1 mouse_genomes_project 8 114287351 114335231 - Fa2h protein_coding retained_intron MGP_LPJ_T0015923.1 MGP_LPJ_G0014014.1 mouse_genomes_project 8 34631141 34631505 + processed_pseudogene processed_pseudogene MGP_LPJ_T0088949.1 MGP_LPJ_G0033611.1 mouse_genomes_project 8 70666682 70675281 + MGP_LPJ_P0088949 Comp protein_coding protein_coding MGP_LPJ_T0090006.1 MGP_LPJ_G0033950.1 mouse_genomes_project 8 107901609 107932964 + Lrrc36 protein_coding processed_transcript MGP_LPJ_T0090007.1 MGP_LPJ_G0033950.1 mouse_genomes_project 8 107901660 107914860 + Lrrc36 protein_coding processed_transcript MGP_LPJ_T0090008.1 MGP_LPJ_G0033950.1 mouse_genomes_project 8 107901660 107955046 + MGP_LPJ_P0090008 Lrrc36 protein_coding protein_coding MGP_LPJ_T0090009.1 MGP_LPJ_G0033950.1 mouse_genomes_project 8 107915596 107955044 + MGP_LPJ_P0090009 Lrrc36 protein_coding protein_coding MGP_LPJ_T0089834.1 MGP_LPJ_G0033885.1 mouse_genomes_project 8 96651555 96676846 + MGP_LPJ_P0089834 Drc7 protein_coding protein_coding MGP_LPJ_T0090688.1 MGP_LPJ_G0034166.1 mouse_genomes_project 8 127696892 127699864 - MGP_LPJ_P0090688 Acta1 protein_coding protein_coding MGP_LPJ_T0089799.1 MGP_LPJ_G0033875.1 mouse_genomes_project 8 96358833 96365764 + Cx3cl1 protein_coding processed_transcript MGP_LPJ_T0089800.1 MGP_LPJ_G0033875.1 mouse_genomes_project 8 96358833 96369238 + MGP_LPJ_P0089800 Cx3cl1 protein_coding protein_coding MGP_LPJ_T0089801.1 MGP_LPJ_G0033875.1 mouse_genomes_project 8 96359028 96366457 + MGP_LPJ_P0089801 Cx3cl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0089802.1 MGP_LPJ_G0033875.1 mouse_genomes_project 8 96359049 96366841 + MGP_LPJ_P0089802 Cx3cl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0009194.1 MGP_LPJ_G0007386.1 mouse_genomes_project 8 113107094 113109309 - Gm26832 lincRNA lincRNA MGP_LPJ_T0089307.1 MGP_LPJ_G0033728.1 mouse_genomes_project 8 81808901 81842290 - MGP_LPJ_P0089307 Usp38 protein_coding protein_coding MGP_LPJ_T0015915.1 MGP_LPJ_G0014006.1 mouse_genomes_project 8 21012400 21012655 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005351.1 MGP_LPJ_G0004539.1 mouse_genomes_project 8 9014617 9016044 - Gm15875 antisense antisense MGP_LPJ_T0088875.1 MGP_LPJ_G0033598.1 mouse_genomes_project 8 70419184 70427578 - MGP_LPJ_P0088875 Rfxank protein_coding protein_coding MGP_LPJ_T0088877.1 MGP_LPJ_G0033598.1 mouse_genomes_project 8 70421961 70427466 - MGP_LPJ_P0088877 Rfxank protein_coding unknown_likely_coding MGP_LPJ_T0090398.1 MGP_LPJ_G0034094.1 mouse_genomes_project 8 123185501 123246583 + MGP_LPJ_P0090398 Atp2c2 protein_coding protein_coding MGP_LPJ_T0090540.1 MGP_LPJ_G0034124.1 mouse_genomes_project 8 126019723 126023454 - MGP_LPJ_P0090540 Trhr2 protein_coding protein_coding MGP_LPJ_T0088820.1 MGP_LPJ_G0033578.1 mouse_genomes_project 8 69912479 69922192 - MGP_LPJ_P0088820 Zfp868 protein_coding unknown_likely_coding MGP_LPJ_T0088821.1 MGP_LPJ_G0033578.1 mouse_genomes_project 8 69914247 69915887 - Zfp868 protein_coding retained_intron MGP_LPJ_T0088822.1 MGP_LPJ_G0033578.1 mouse_genomes_project 8 69920713 69928398 - Zfp868 protein_coding retained_intron MGP_LPJ_T0089051.1 MGP_LPJ_G0033647.1 mouse_genomes_project 8 71734087 71736960 + MGP_LPJ_P0089051 Use1 protein_coding protein_coding MGP_LPJ_T0089052.1 MGP_LPJ_G0033647.1 mouse_genomes_project 8 71734181 71736963 + MGP_LPJ_P0089052 Use1 protein_coding protein_coding MGP_LPJ_T0089053.1 MGP_LPJ_G0033647.1 mouse_genomes_project 8 71734244 71735046 + MGP_LPJ_P0089053 Use1 protein_coding protein_coding MGP_LPJ_T0089054.1 MGP_LPJ_G0033647.1 mouse_genomes_project 8 71734456 71736963 + Use1 protein_coding retained_intron MGP_LPJ_T0089055.1 MGP_LPJ_G0033647.1 mouse_genomes_project 8 71734456 71736963 + Use1 protein_coding retained_intron MGP_LPJ_T0089056.1 MGP_LPJ_G0033647.1 mouse_genomes_project 8 71734456 71736963 + MGP_LPJ_P0089056 Use1 protein_coding protein_coding MGP_LPJ_T0089057.1 MGP_LPJ_G0033647.1 mouse_genomes_project 8 71734482 71736062 + Use1 protein_coding retained_intron MGP_LPJ_T0089058.1 MGP_LPJ_G0033647.1 mouse_genomes_project 8 71734482 71736229 + Use1 protein_coding retained_intron MGP_LPJ_T0089059.1 MGP_LPJ_G0033647.1 mouse_genomes_project 8 71734623 71735916 + Use1 protein_coding retained_intron MGP_LPJ_T0089060.1 MGP_LPJ_G0033647.1 mouse_genomes_project 8 71734880 71735453 + Use1 protein_coding retained_intron MGP_LPJ_T0089061.1 MGP_LPJ_G0033647.1 mouse_genomes_project 8 71735019 71736963 + Use1 protein_coding retained_intron MGP_LPJ_T0089062.1 MGP_LPJ_G0033647.1 mouse_genomes_project 8 71736022 71736902 + Use1 protein_coding retained_intron MGP_LPJ_T0088884.1 MGP_LPJ_G0033601.1 mouse_genomes_project 8 70441274 70455381 + MGP_LPJ_P0088884 protein_coding protein_coding MGP_LPJ_T0088885.1 MGP_LPJ_G0033601.1 mouse_genomes_project 8 70441274 70455381 + MGP_LPJ_P0088885 protein_coding protein_coding MGP_LPJ_T0088886.1 MGP_LPJ_G0033601.1 mouse_genomes_project 8 70441277 70455380 + MGP_LPJ_P0088886 protein_coding protein_coding MGP_LPJ_T0088887.1 MGP_LPJ_G0033601.1 mouse_genomes_project 8 70441277 70455380 + MGP_LPJ_P0088887 protein_coding protein_coding MGP_LPJ_T0090773.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131101767 131682543 + MGP_LPJ_P0090773 Pard3 protein_coding protein_coding MGP_LPJ_T0090774.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131101930 131491845 + MGP_LPJ_P0090774 Pard3 protein_coding protein_coding MGP_LPJ_T0090775.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131101930 131682858 + MGP_LPJ_P0090775 Pard3 protein_coding protein_coding MGP_LPJ_T0090776.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131101972 131471222 + Pard3 protein_coding retained_intron MGP_LPJ_T0090777.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131102119 131682543 + MGP_LPJ_P0090777 Pard3 protein_coding protein_coding MGP_LPJ_T0090778.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131102133 131331899 + MGP_LPJ_P0090778 Pard3 protein_coding nonsense_mediated_decay MGP_LPJ_T0090779.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131102133 131428202 + MGP_LPJ_P0090779 Pard3 protein_coding nonsense_mediated_decay MGP_LPJ_T0090780.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131102169 131681381 + MGP_LPJ_P0090780 Pard3 protein_coding protein_coding MGP_LPJ_T0090781.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131102169 131681381 + MGP_LPJ_P0090781 Pard3 protein_coding protein_coding MGP_LPJ_T0090782.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131102219 131485773 + MGP_LPJ_P0090782 Pard3 protein_coding protein_coding MGP_LPJ_T0090783.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131102219 131682543 + MGP_LPJ_P0090783 Pard3 protein_coding protein_coding MGP_LPJ_T0090784.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131102219 131535707 + MGP_LPJ_P0090784 Pard3 protein_coding protein_coding MGP_LPJ_T0090785.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131102219 131485773 + MGP_LPJ_P0090785 Pard3 protein_coding protein_coding MGP_LPJ_T0090786.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131102219 131485773 + MGP_LPJ_P0090786 Pard3 protein_coding protein_coding MGP_LPJ_T0090787.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131102221 131485704 + MGP_LPJ_P0090787 Pard3 protein_coding protein_coding MGP_LPJ_T0090788.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131102228 131459432 + MGP_LPJ_P0090788 Pard3 protein_coding protein_coding MGP_LPJ_T0090789.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131112267 131485704 + MGP_LPJ_P0090789 Pard3 protein_coding protein_coding MGP_LPJ_T0090790.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131355783 131492164 + MGP_LPJ_P0090790 Pard3 protein_coding protein_coding MGP_LPJ_T0090791.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131414382 131419759 + Pard3 protein_coding retained_intron MGP_LPJ_T0090792.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131415278 131457659 + MGP_LPJ_P0090792 Pard3 protein_coding protein_coding MGP_LPJ_T0090793.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131429319 131434811 + Pard3 protein_coding retained_intron MGP_LPJ_T0090794.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131447156 131459704 + MGP_LPJ_P0090794 Pard3 protein_coding protein_coding MGP_LPJ_T0090795.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131464469 131492161 + MGP_LPJ_P0090795 Pard3 protein_coding protein_coding MGP_LPJ_T0090796.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131469669 131535598 + Pard3 protein_coding retained_intron MGP_LPJ_T0090797.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131506766 131535614 + MGP_LPJ_P0090797 Pard3 protein_coding protein_coding MGP_LPJ_T0090798.1 MGP_LPJ_G0034200.1 mouse_genomes_project 8 131650370 131681424 + Pard3 protein_coding processed_transcript MGP_LPJ_T0088083.1 MGP_LPJ_G0033339.1 mouse_genomes_project 8 19185495 19186550 - MGP_LPJ_P0088083 AY761185 protein_coding protein_coding MGP_LPJ_T0089896.1 MGP_LPJ_G0033906.1 mouse_genomes_project 8 106457402 106513265 + MGP_LPJ_P0089896 Bean1 protein_coding protein_coding MGP_LPJ_T0089897.1 MGP_LPJ_G0033906.1 mouse_genomes_project 8 106457402 106513265 + MGP_LPJ_P0089897 Bean1 protein_coding protein_coding MGP_LPJ_T0089898.1 MGP_LPJ_G0033906.1 mouse_genomes_project 8 106457402 106513265 + MGP_LPJ_P0089898 Bean1 protein_coding protein_coding MGP_LPJ_T0089899.1 MGP_LPJ_G0033906.1 mouse_genomes_project 8 106457402 106513265 + MGP_LPJ_P0089899 Bean1 protein_coding protein_coding MGP_LPJ_T0005348.1 MGP_LPJ_G0004536.1 mouse_genomes_project 8 639367 668571 + Gm16553 antisense antisense MGP_LPJ_T0090730.1 MGP_LPJ_G0034182.1 mouse_genomes_project 8 128732199 128766571 + MGP_LPJ_P0090730 Gnpat protein_coding protein_coding MGP_LPJ_T0090731.1 MGP_LPJ_G0034182.1 mouse_genomes_project 8 128732238 128763242 + MGP_LPJ_P0090731 Gnpat protein_coding protein_coding MGP_LPJ_T0090732.1 MGP_LPJ_G0034182.1 mouse_genomes_project 8 128759959 128763563 + Gnpat protein_coding retained_intron MGP_LPJ_T0090733.1 MGP_LPJ_G0034182.1 mouse_genomes_project 8 128760028 128766062 + Gnpat protein_coding retained_intron MGP_LPJ_T0090734.1 MGP_LPJ_G0034182.1 mouse_genomes_project 8 128762010 128763421 + Gnpat protein_coding retained_intron MGP_LPJ_T0090735.1 MGP_LPJ_G0034182.1 mouse_genomes_project 8 128764142 128766132 + Gnpat protein_coding retained_intron MGP_LPJ_T0089407.1 MGP_LPJ_G0033763.1 mouse_genomes_project 8 85115688 85130740 - MGP_LPJ_P0089407 Cc2d1a protein_coding protein_coding MGP_LPJ_T0089408.1 MGP_LPJ_G0033763.1 mouse_genomes_project 8 85115688 85130811 - MGP_LPJ_P0089408 Cc2d1a protein_coding protein_coding MGP_LPJ_T0089409.1 MGP_LPJ_G0033763.1 mouse_genomes_project 8 85115697 85119675 - Cc2d1a protein_coding retained_intron MGP_LPJ_T0089410.1 MGP_LPJ_G0033763.1 mouse_genomes_project 8 85129329 85130772 - Cc2d1a protein_coding processed_transcript MGP_LPJ_T0090662.1 MGP_LPJ_G0034157.1 mouse_genomes_project 8 127165423 127168981 + MGP_LPJ_P0090662 Mc1r protein_coding protein_coding MGP_LPJ_T0089907.1 MGP_LPJ_G0033913.1 mouse_genomes_project 8 106659628 106666110 + MGP_LPJ_P0089907 Cmtm3 protein_coding unknown_likely_coding MGP_LPJ_T0018409.1 MGP_LPJ_G0015632.1 mouse_genomes_project 8 48109521 48137844 + Gm19744 processed_transcript lincRNA MGP_LPJ_T0018410.1 MGP_LPJ_G0015632.1 mouse_genomes_project 8 48109572 48113337 + Gm19744 processed_transcript lincRNA MGP_LPJ_T0018411.1 MGP_LPJ_G0015632.1 mouse_genomes_project 8 48109647 48110960 + Gm19744 processed_transcript antisense MGP_LPJ_T0018412.1 MGP_LPJ_G0015632.1 mouse_genomes_project 8 48109891 48110365 + Gm19744 processed_transcript retained_intron MGP_LPJ_T0018413.1 MGP_LPJ_G0015632.1 mouse_genomes_project 8 48109953 48110459 + Gm19744 processed_transcript antisense MGP_LPJ_T0018414.1 MGP_LPJ_G0015632.1 mouse_genomes_project 8 48123381 48138729 + Gm19744 processed_transcript lincRNA MGP_LPJ_T0010998.1 MGP_LPJ_G0009116.1 mouse_genomes_project 8 84670301 84670408 - Mir1668 miRNA miRNA MGP_LPJ_T0088370.1 MGP_LPJ_G0033440.1 mouse_genomes_project 8 32568850 32578939 + MGP_LPJ_P0088370 Mboat4 protein_coding protein_coding MGP_LPJ_T0090267.1 MGP_LPJ_G0034044.1 mouse_genomes_project 8 114394778 114470753 - MGP_LPJ_P0090267 Wdr59 protein_coding protein_coding MGP_LPJ_T0090268.1 MGP_LPJ_G0034044.1 mouse_genomes_project 8 114394778 114470753 - MGP_LPJ_P0090268 Wdr59 protein_coding protein_coding MGP_LPJ_T0089627.1 MGP_LPJ_G0033818.1 mouse_genomes_project 8 87953343 88000414 - MGP_LPJ_P0089627 N4bp1 protein_coding protein_coding MGP_LPJ_T0090344.1 MGP_LPJ_G0034071.1 mouse_genomes_project 8 120221854 120232899 - MGP_LPJ_P0090344 1700030J22Rik protein_coding protein_coding MGP_LPJ_T0087891.1 MGP_LPJ_G0033275.1 mouse_genomes_project 8 9472639 9474470 + MGP_LPJ_P0087891 A230072I06Rik protein_coding protein_coding MGP_LPJ_T0005377.1 MGP_LPJ_G0004557.1 mouse_genomes_project 8 44063799 44068969 - Gm2366 antisense antisense MGP_LPJ_T0009180.1 MGP_LPJ_G0007377.1 mouse_genomes_project 8 95993585 96004836 - 9330175E14Rik lincRNA lincRNA MGP_LPJ_T0009181.1 MGP_LPJ_G0007377.1 mouse_genomes_project 8 96000503 96004961 - 9330175E14Rik lincRNA lincRNA MGP_LPJ_T0009182.1 MGP_LPJ_G0007377.1 mouse_genomes_project 8 96003805 96005792 - 9330175E14Rik lincRNA lincRNA MGP_LPJ_T0089306.1 MGP_LPJ_G0033727.1 mouse_genomes_project 8 81585049 81705906 - MGP_LPJ_P0089306 Gab1 protein_coding protein_coding MGP_LPJ_T0090446.1 MGP_LPJ_G0034106.1 mouse_genomes_project 8 124162062 124226980 - MGP_LPJ_P0090446 Gm27021 protein_coding protein_coding MGP_LPJ_T0088229.1 MGP_LPJ_G0033391.1 mouse_genomes_project 8 23616277 23638292 - MGP_LPJ_P0088229 Letm2 protein_coding unknown_likely_coding MGP_LPJ_T0090469.1 MGP_LPJ_G0034111.1 mouse_genomes_project 8 124695053 124711744 - MGP_LPJ_P0090469 Mthfsd protein_coding protein_coding MGP_LPJ_T0090470.1 MGP_LPJ_G0034111.1 mouse_genomes_project 8 124698437 124704611 - Mthfsd protein_coding processed_transcript MGP_LPJ_T0090471.1 MGP_LPJ_G0034111.1 mouse_genomes_project 8 124700978 124711753 - MGP_LPJ_P0090471 Mthfsd protein_coding protein_coding MGP_LPJ_T0090472.1 MGP_LPJ_G0034111.1 mouse_genomes_project 8 124700980 124711721 - Mthfsd protein_coding processed_transcript MGP_LPJ_T0090473.1 MGP_LPJ_G0034111.1 mouse_genomes_project 8 124700982 124711736 - MGP_LPJ_P0090473 Mthfsd protein_coding protein_coding MGP_LPJ_T0090474.1 MGP_LPJ_G0034111.1 mouse_genomes_project 8 124701192 124705019 - Mthfsd protein_coding retained_intron MGP_LPJ_T0090475.1 MGP_LPJ_G0034111.1 mouse_genomes_project 8 124701276 124711818 - MGP_LPJ_P0090475 Mthfsd protein_coding protein_coding MGP_LPJ_T0090476.1 MGP_LPJ_G0034111.1 mouse_genomes_project 8 124701362 124711805 - Mthfsd protein_coding retained_intron MGP_LPJ_T0090477.1 MGP_LPJ_G0034111.1 mouse_genomes_project 8 124702133 124711714 - Mthfsd protein_coding processed_transcript MGP_LPJ_T0090478.1 MGP_LPJ_G0034111.1 mouse_genomes_project 8 124702433 124709058 - Mthfsd protein_coding processed_transcript MGP_LPJ_T0090479.1 MGP_LPJ_G0034111.1 mouse_genomes_project 8 124704601 124711724 - MGP_LPJ_P0090479 Mthfsd protein_coding protein_coding MGP_LPJ_T0090480.1 MGP_LPJ_G0034111.1 mouse_genomes_project 8 124706148 124711069 - Mthfsd protein_coding retained_intron MGP_LPJ_T0090481.1 MGP_LPJ_G0034111.1 mouse_genomes_project 8 124707277 124709115 - Mthfsd protein_coding processed_transcript MGP_LPJ_T0090482.1 MGP_LPJ_G0034111.1 mouse_genomes_project 8 124707524 124711739 - Mthfsd protein_coding processed_transcript MGP_LPJ_T0090483.1 MGP_LPJ_G0034111.1 mouse_genomes_project 8 124707900 124711769 - Mthfsd protein_coding processed_transcript MGP_LPJ_T0089767.1 MGP_LPJ_G0033861.1 mouse_genomes_project 8 95685740 95687568 + MGP_LPJ_P0089767 Mt4 protein_coding protein_coding MGP_LPJ_T0090112.1 MGP_LPJ_G0033996.1 mouse_genomes_project 8 109622022 109640310 + MGP_LPJ_P0090112 Vps4a protein_coding protein_coding MGP_LPJ_T0090113.1 MGP_LPJ_G0033996.1 mouse_genomes_project 8 109633568 109637236 + Vps4a protein_coding retained_intron MGP_LPJ_T0090114.1 MGP_LPJ_G0033996.1 mouse_genomes_project 8 109636803 109637655 + Vps4a protein_coding retained_intron MGP_LPJ_T0099799.1 MGP_LPJ_G0038062.1 mouse_genomes_project 8 131084799 131084958 + Gm22730 snRNA snRNA MGP_LPJ_T0099760.1 MGP_LPJ_G0038023.1 mouse_genomes_project 8 41720383 41720489 + Gm26181 snRNA snRNA MGP_LPJ_T0088817.1 MGP_LPJ_G0033576.1 mouse_genomes_project 8 69586231 69594136 + MGP_LPJ_P0088817 D130040H23Rik protein_coding unknown_likely_coding MGP_LPJ_T0088818.1 MGP_LPJ_G0033576.1 mouse_genomes_project 8 69591842 69594218 + MGP_LPJ_P0088818 D130040H23Rik protein_coding protein_coding MGP_LPJ_T0087851.1 MGP_LPJ_G0033260.1 mouse_genomes_project 8 7024509 7030814 - MGP_LPJ_P0087851 Lig4 protein_coding protein_coding MGP_LPJ_T0087852.1 MGP_LPJ_G0033260.1 mouse_genomes_project 8 7025367 7032177 - MGP_LPJ_P0087852 Lig4 protein_coding protein_coding MGP_LPJ_T0015932.1 MGP_LPJ_G0014023.1 mouse_genomes_project 8 60983427 60983800 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005375.1 MGP_LPJ_G0004555.1 mouse_genomes_project 8 39914024 39916316 + Gm16192 antisense antisense MGP_LPJ_T0089328.1 MGP_LPJ_G0033735.1 mouse_genomes_project 8 84214606 84222647 + MGP_LPJ_P0089328 Ucp1 protein_coding protein_coding MGP_LPJ_T0011731.1 MGP_LPJ_G0009849.1 mouse_genomes_project 8 30017751 30017852 - Gm24184 misc_RNA misc_RNA MGP_LPJ_T0088069.1 MGP_LPJ_G0033327.1 mouse_genomes_project 8 16683156 16685409 + MGP_LPJ_P0088069 Spag11b protein_coding protein_coding MGP_LPJ_T0088070.1 MGP_LPJ_G0033327.1 mouse_genomes_project 8 16683195 16685148 + MGP_LPJ_P0088070 Spag11b protein_coding protein_coding MGP_LPJ_T0088566.1 MGP_LPJ_G0033498.1 mouse_genomes_project 8 45698727 45740607 - MGP_LPJ_P0088566 Primpol protein_coding protein_coding MGP_LPJ_T0088567.1 MGP_LPJ_G0033498.1 mouse_genomes_project 8 45699310 45740607 - Primpol protein_coding retained_intron MGP_LPJ_T0088568.1 MGP_LPJ_G0033498.1 mouse_genomes_project 8 45709783 45716108 - Primpol protein_coding processed_transcript MGP_LPJ_T0088569.1 MGP_LPJ_G0033498.1 mouse_genomes_project 8 45728555 45736422 - MGP_LPJ_P0088569 Primpol protein_coding protein_coding MGP_LPJ_T0088570.1 MGP_LPJ_G0033498.1 mouse_genomes_project 8 45734184 45740619 - Primpol protein_coding retained_intron MGP_LPJ_T0088338.1 MGP_LPJ_G0033436.1 mouse_genomes_project 8 32156353 32207313 + MGP_LPJ_P0088338 Gtf2e2 protein_coding protein_coding MGP_LPJ_T0088339.1 MGP_LPJ_G0033436.1 mouse_genomes_project 8 32156562 32207313 + MGP_LPJ_P0088339 Gtf2e2 protein_coding protein_coding MGP_LPJ_T0088340.1 MGP_LPJ_G0033436.1 mouse_genomes_project 8 32156653 32179531 + MGP_LPJ_P0088340 Gtf2e2 protein_coding protein_coding MGP_LPJ_T0088341.1 MGP_LPJ_G0033436.1 mouse_genomes_project 8 32156831 32163166 + MGP_LPJ_P0088341 Gtf2e2 protein_coding protein_coding MGP_LPJ_T0088342.1 MGP_LPJ_G0033436.1 mouse_genomes_project 8 32156859 32207322 + MGP_LPJ_P0088342 Gtf2e2 protein_coding protein_coding MGP_LPJ_T0088343.1 MGP_LPJ_G0033436.1 mouse_genomes_project 8 32157964 32186813 + MGP_LPJ_P0088343 Gtf2e2 protein_coding protein_coding MGP_LPJ_T0088345.1 MGP_LPJ_G0033436.1 mouse_genomes_project 8 32193668 32206927 + Gtf2e2 protein_coding processed_transcript MGP_LPJ_T0090357.1 MGP_LPJ_G0034078.1 mouse_genomes_project 8 120998195 121008353 - MGP_LPJ_P0090357 Sdr42e1 protein_coding protein_coding MGP_LPJ_T0090358.1 MGP_LPJ_G0034078.1 mouse_genomes_project 8 120998198 121010495 - MGP_LPJ_P0090358 Sdr42e1 protein_coding protein_coding MGP_LPJ_T0090359.1 MGP_LPJ_G0034078.1 mouse_genomes_project 8 121000129 121010495 - MGP_LPJ_P0090359 Sdr42e1 protein_coding protein_coding MGP_LPJ_T0089928.1 MGP_LPJ_G0033920.1 mouse_genomes_project 8 106957323 106968730 - MGP_LPJ_P0089928 Cdh16 protein_coding protein_coding MGP_LPJ_T0088712.1 MGP_LPJ_G0033545.1 mouse_genomes_project 8 61844439 61883053 + MGP_LPJ_P0088712 Ddx60 protein_coding protein_coding MGP_LPJ_T0088713.1 MGP_LPJ_G0033545.1 mouse_genomes_project 8 61844441 61969960 + MGP_LPJ_P0088713 Ddx60 protein_coding protein_coding MGP_LPJ_T0088714.1 MGP_LPJ_G0033545.1 mouse_genomes_project 8 61844441 61858664 + MGP_LPJ_P0088714 Ddx60 protein_coding protein_coding MGP_LPJ_T0088715.1 MGP_LPJ_G0033545.1 mouse_genomes_project 8 61844441 61969954 + MGP_LPJ_P0088715 Ddx60 protein_coding protein_coding MGP_LPJ_T0088716.1 MGP_LPJ_G0033545.1 mouse_genomes_project 8 61903337 61907507 + Ddx60 protein_coding retained_intron MGP_LPJ_T0088717.1 MGP_LPJ_G0033545.1 mouse_genomes_project 8 61941107 61944410 + Ddx60 protein_coding retained_intron MGP_LPJ_T0088718.1 MGP_LPJ_G0033545.1 mouse_genomes_project 8 61945620 61964880 + Ddx60 protein_coding retained_intron MGP_LPJ_T0010972.1 MGP_LPJ_G0009090.1 mouse_genomes_project 8 11715590 11715698 + Gm44347 miRNA miRNA MGP_LPJ_T0090291.1 MGP_LPJ_G0034050.1 mouse_genomes_project 8 114846252 114859537 - MGP_LPJ_P0090291 Tmem170 protein_coding protein_coding MGP_LPJ_T0099786.1 MGP_LPJ_G0038049.1 mouse_genomes_project 8 107644201 107644305 + Gm22063 snRNA snRNA MGP_LPJ_T0087915.1 MGP_LPJ_G0033281.1 mouse_genomes_project 8 10103146 10109505 + MGP_LPJ_P0087915 Mcf2l protein_coding protein_coding MGP_LPJ_T0087916.1 MGP_LPJ_G0033281.1 mouse_genomes_project 8 10103167 10254499 + MGP_LPJ_P0087916 Mcf2l protein_coding protein_coding MGP_LPJ_T0087917.1 MGP_LPJ_G0033281.1 mouse_genomes_project 8 10103288 10121595 + Mcf2l protein_coding processed_transcript MGP_LPJ_T0087918.1 MGP_LPJ_G0033281.1 mouse_genomes_project 8 10148598 10256352 + MGP_LPJ_P0087918 Mcf2l protein_coding protein_coding MGP_LPJ_T0087919.1 MGP_LPJ_G0033281.1 mouse_genomes_project 8 10149235 10255956 + MGP_LPJ_P0087919 Mcf2l protein_coding protein_coding MGP_LPJ_T0087920.1 MGP_LPJ_G0033281.1 mouse_genomes_project 8 10149253 10227444 + Mcf2l protein_coding processed_transcript MGP_LPJ_T0087921.1 MGP_LPJ_G0033281.1 mouse_genomes_project 8 10149317 10254754 + MGP_LPJ_P0087921 Mcf2l protein_coding protein_coding MGP_LPJ_T0087922.1 MGP_LPJ_G0033281.1 mouse_genomes_project 8 10160126 10253525 + MGP_LPJ_P0087922 Mcf2l protein_coding protein_coding MGP_LPJ_T0087923.1 MGP_LPJ_G0033281.1 mouse_genomes_project 8 10183188 10223391 + Mcf2l protein_coding retained_intron MGP_LPJ_T0087924.1 MGP_LPJ_G0033281.1 mouse_genomes_project 8 10183231 10249379 + MGP_LPJ_P0087924 Mcf2l protein_coding protein_coding MGP_LPJ_T0087925.1 MGP_LPJ_G0033281.1 mouse_genomes_project 8 10183392 10254313 + MGP_LPJ_P0087925 Mcf2l protein_coding protein_coding MGP_LPJ_T0087926.1 MGP_LPJ_G0033281.1 mouse_genomes_project 8 10184691 10254720 + MGP_LPJ_P0087926 Mcf2l protein_coding protein_coding MGP_LPJ_T0087927.1 MGP_LPJ_G0033281.1 mouse_genomes_project 8 10184759 10255948 + MGP_LPJ_P0087927 Mcf2l protein_coding protein_coding MGP_LPJ_T0087928.1 MGP_LPJ_G0033281.1 mouse_genomes_project 8 10219493 10252816 + MGP_LPJ_P0087928 Mcf2l protein_coding protein_coding MGP_LPJ_T0087929.1 MGP_LPJ_G0033281.1 mouse_genomes_project 8 10219498 10246805 + MGP_LPJ_P0087929 Mcf2l protein_coding protein_coding MGP_LPJ_T0087930.1 MGP_LPJ_G0033281.1 mouse_genomes_project 8 10219513 10255952 + MGP_LPJ_P0087930 Mcf2l protein_coding protein_coding MGP_LPJ_T0087931.1 MGP_LPJ_G0033281.1 mouse_genomes_project 8 10246752 10255974 + MGP_LPJ_P0087931 Mcf2l protein_coding protein_coding MGP_LPJ_T0087932.1 MGP_LPJ_G0033281.1 mouse_genomes_project 8 10246768 10253442 + MGP_LPJ_P0087932 Mcf2l protein_coding protein_coding MGP_LPJ_T0087933.1 MGP_LPJ_G0033281.1 mouse_genomes_project 8 10247076 10252787 + MGP_LPJ_P0087933 Mcf2l protein_coding protein_coding MGP_LPJ_T0087934.1 MGP_LPJ_G0033281.1 mouse_genomes_project 8 10248308 10250713 + Mcf2l protein_coding retained_intron MGP_LPJ_T0087935.1 MGP_LPJ_G0033281.1 mouse_genomes_project 8 10248912 10254445 + MGP_LPJ_P0087935 Mcf2l protein_coding protein_coding MGP_LPJ_T0087936.1 MGP_LPJ_G0033281.1 mouse_genomes_project 8 10252523 10254453 + Mcf2l protein_coding retained_intron MGP_LPJ_T0090578.1 MGP_LPJ_G0034134.1 mouse_genomes_project 8 126250190 126252458 - MGP_LPJ_P0090578 Aprt protein_coding protein_coding MGP_LPJ_T0090146.1 MGP_LPJ_G0034004.1 mouse_genomes_project 8 110029288 110045814 - MGP_LPJ_P0090146 Nqo1 protein_coding protein_coding MGP_LPJ_T0089479.1 MGP_LPJ_G0033779.1 mouse_genomes_project 8 85866671 85870712 - MGP_LPJ_P0089479 Rad23a protein_coding protein_coding MGP_LPJ_T0089480.1 MGP_LPJ_G0033779.1 mouse_genomes_project 8 85867304 85873307 - MGP_LPJ_P0089480 Rad23a protein_coding protein_coding MGP_LPJ_T0089481.1 MGP_LPJ_G0033779.1 mouse_genomes_project 8 85867562 85873331 - MGP_LPJ_P0089481 Rad23a protein_coding protein_coding MGP_LPJ_T0089482.1 MGP_LPJ_G0033779.1 mouse_genomes_project 8 85868284 85873331 - MGP_LPJ_P0089482 Rad23a protein_coding protein_coding MGP_LPJ_T0089483.1 MGP_LPJ_G0033779.1 mouse_genomes_project 8 85870386 85871331 - Rad23a protein_coding retained_intron MGP_LPJ_T0089484.1 MGP_LPJ_G0033779.1 mouse_genomes_project 8 85870399 85871345 - Rad23a protein_coding retained_intron MGP_LPJ_T0089485.1 MGP_LPJ_G0033779.1 mouse_genomes_project 8 85870963 85873302 - Rad23a protein_coding retained_intron MGP_LPJ_T0009200.1 MGP_LPJ_G0007392.1 mouse_genomes_project 8 124203050 124212752 + Gm26537 lincRNA lincRNA MGP_LPJ_T0101008.1 MGP_LPJ_G0039271.1 mouse_genomes_project 8 11213207 11213337 + Gm24698 snoRNA snoRNA MGP_LPJ_T0089322.1 MGP_LPJ_G0033731.1 mouse_genomes_project 8 83685117 83695692 - MGP_LPJ_P0089322 Zfp330 protein_coding protein_coding MGP_LPJ_T0088079.1 MGP_LPJ_G0033336.1 mouse_genomes_project 8 18716106 18721150 + MGP_LPJ_P0088079 Defb33 protein_coding protein_coding MGP_LPJ_T0011023.1 MGP_LPJ_G0009141.1 mouse_genomes_project 8 104796808 104796903 - Gm26301 miRNA miRNA MGP_LPJ_T0101044.1 MGP_LPJ_G0039307.1 mouse_genomes_project 8 77771680 77771810 - Gm24838 snoRNA snoRNA MGP_LPJ_T0099779.1 MGP_LPJ_G0038042.1 mouse_genomes_project 8 87777202 87777310 - Gm22305 snRNA snRNA MGP_LPJ_T0090353.1 MGP_LPJ_G0034075.1 mouse_genomes_project 8 120423465 120474171 + MGP_LPJ_P0090353 Gan protein_coding protein_coding MGP_LPJ_T0011726.1 MGP_LPJ_G0009844.1 mouse_genomes_project 8 8863500 8863739 - Gm27854 misc_RNA misc_RNA MGP_LPJ_T0089686.1 MGP_LPJ_G0033837.1 mouse_genomes_project 8 92453053 92472139 - MGP_LPJ_P0089686 Aktip protein_coding protein_coding MGP_LPJ_T0089690.1 MGP_LPJ_G0033837.1 mouse_genomes_project 8 92464530 92475241 - MGP_LPJ_P0089690 Aktip protein_coding protein_coding MGP_LPJ_T0089691.1 MGP_LPJ_G0033837.1 mouse_genomes_project 8 92464530 92474718 - MGP_LPJ_P0089691 Aktip protein_coding protein_coding MGP_LPJ_T0089692.1 MGP_LPJ_G0033837.1 mouse_genomes_project 8 92465485 92474799 - MGP_LPJ_P0089692 Aktip protein_coding protein_coding MGP_LPJ_T0089693.1 MGP_LPJ_G0033837.1 mouse_genomes_project 8 92465647 92474803 - MGP_LPJ_P0089693 Aktip protein_coding protein_coding MGP_LPJ_T0089694.1 MGP_LPJ_G0033837.1 mouse_genomes_project 8 92472072 92472877 - Aktip protein_coding processed_transcript MGP_LPJ_T0101025.1 MGP_LPJ_G0039288.1 mouse_genomes_project 8 44646659 44646796 - Gm23604 snoRNA snoRNA MGP_LPJ_T0088036.1 MGP_LPJ_G0033315.1 mouse_genomes_project 8 12469193 12557892 + MGP_LPJ_P0088036 Myom2 protein_coding protein_coding MGP_LPJ_T0088037.1 MGP_LPJ_G0033315.1 mouse_genomes_project 8 12470451 12478884 + Myom2 protein_coding processed_transcript MGP_LPJ_T0088038.1 MGP_LPJ_G0033315.1 mouse_genomes_project 8 12471660 12491018 + Myom2 protein_coding retained_intron MGP_LPJ_T0088039.1 MGP_LPJ_G0033315.1 mouse_genomes_project 8 12527470 12531667 + Myom2 protein_coding retained_intron MGP_LPJ_T0088040.1 MGP_LPJ_G0033315.1 mouse_genomes_project 8 12543461 12555535 + Myom2 protein_coding processed_transcript MGP_LPJ_T0011723.1 MGP_LPJ_G0009841.1 mouse_genomes_project 8 1180441 1180725 + Gm26102 misc_RNA misc_RNA MGP_LPJ_T0009091.1 MGP_LPJ_G0007310.1 mouse_genomes_project 8 20247799 20248675 + 1810012K16Rik lincRNA lincRNA MGP_LPJ_T0009103.1 MGP_LPJ_G0007320.1 mouse_genomes_project 8 32154203 32156340 - lincRNA lincRNA MGP_LPJ_T0009104.1 MGP_LPJ_G0007320.1 mouse_genomes_project 8 32154203 32156335 - lincRNA lincRNA MGP_LPJ_T0089018.1 MGP_LPJ_G0033632.1 mouse_genomes_project 8 71080629 71082903 - MGP_LPJ_P0089018 Mpv17l2 protein_coding protein_coding MGP_LPJ_T0088137.1 MGP_LPJ_G0033367.1 mouse_genomes_project 8 20609122 20638464 + MGP_LPJ_P0088137 Plat protein_coding protein_coding MGP_LPJ_T0087866.1 MGP_LPJ_G0033268.1 mouse_genomes_project 8 8631592 8647181 + MGP_LPJ_P0087866 Carkd protein_coding protein_coding MGP_LPJ_T0087867.1 MGP_LPJ_G0033268.1 mouse_genomes_project 8 8631653 8648863 + MGP_LPJ_P0087867 Carkd protein_coding nonsense_mediated_decay MGP_LPJ_T0087868.1 MGP_LPJ_G0033268.1 mouse_genomes_project 8 8631654 8647181 + MGP_LPJ_P0087868 Carkd protein_coding protein_coding MGP_LPJ_T0087869.1 MGP_LPJ_G0033268.1 mouse_genomes_project 8 8631679 8641085 + Carkd protein_coding retained_intron MGP_LPJ_T0087870.1 MGP_LPJ_G0033268.1 mouse_genomes_project 8 8631719 8644128 + Carkd protein_coding retained_intron MGP_LPJ_T0087871.1 MGP_LPJ_G0033268.1 mouse_genomes_project 8 8631739 8647157 + MGP_LPJ_P0087871 Carkd protein_coding protein_coding MGP_LPJ_T0087872.1 MGP_LPJ_G0033268.1 mouse_genomes_project 8 8643853 8647161 + Carkd protein_coding retained_intron MGP_LPJ_T0011003.1 MGP_LPJ_G0009121.1 mouse_genomes_project 8 85071370 85071458 + Mir709 miRNA miRNA MGP_LPJ_T0090705.1 MGP_LPJ_G0034173.1 mouse_genomes_project 8 128366530 128397773 + MGP_LPJ_P0090705 Cog2 protein_coding protein_coding MGP_LPJ_T0090706.1 MGP_LPJ_G0034173.1 mouse_genomes_project 8 128366567 128375695 + MGP_LPJ_P0090706 Cog2 protein_coding nonsense_mediated_decay MGP_LPJ_T0090707.1 MGP_LPJ_G0034173.1 mouse_genomes_project 8 128366568 128391538 + Cog2 protein_coding retained_intron MGP_LPJ_T0090708.1 MGP_LPJ_G0034173.1 mouse_genomes_project 8 128366582 128375667 + MGP_LPJ_P0090708 Cog2 protein_coding nonsense_mediated_decay MGP_LPJ_T0090709.1 MGP_LPJ_G0034173.1 mouse_genomes_project 8 128380972 128390157 + Cog2 protein_coding retained_intron MGP_LPJ_T0009218.1 MGP_LPJ_G0007405.1 mouse_genomes_project 8 126969357 126976616 + 4933417D19Rik lincRNA lincRNA MGP_LPJ_T0099767.1 MGP_LPJ_G0038030.1 mouse_genomes_project 8 59390207 59390315 + Gm24847 snRNA snRNA MGP_LPJ_T0087779.1 MGP_LPJ_G0033239.1 mouse_genomes_project 8 994235 995881 - MGP_LPJ_P0087779 protein_coding protein_coding MGP_LPJ_T0089034.1 MGP_LPJ_G0033641.1 mouse_genomes_project 8 71211721 71223727 - MGP_LPJ_P0089034 Slc5a5 protein_coding protein_coding MGP_LPJ_T0088034.1 MGP_LPJ_G0033314.1 mouse_genomes_project 8 12451770 12456180 - MGP_LPJ_P0088034 BB014433 protein_coding protein_coding MGP_LPJ_T0088035.1 MGP_LPJ_G0033314.1 mouse_genomes_project 8 12451773 12456171 - MGP_LPJ_P0088035 BB014433 protein_coding protein_coding MGP_LPJ_T0089945.1 MGP_LPJ_G0033928.1 mouse_genomes_project 8 107377212 107384990 + MGP_LPJ_P0089945 Ces2g protein_coding protein_coding MGP_LPJ_T0089139.1 MGP_LPJ_G0033670.1 mouse_genomes_project 8 72079302 72089304 - MGP_LPJ_P0089139 B3gnt3 protein_coding protein_coding MGP_LPJ_T0090400.1 MGP_LPJ_G0034096.1 mouse_genomes_project 8 123301697 123335214 - MGP_LPJ_P0090400 Cotl1 protein_coding protein_coding MGP_LPJ_T0090401.1 MGP_LPJ_G0034096.1 mouse_genomes_project 8 123301697 123335271 - MGP_LPJ_P0090401 Cotl1 protein_coding protein_coding MGP_LPJ_T0089664.1 MGP_LPJ_G0033827.1 mouse_genomes_project 8 89724829 89804750 + MGP_LPJ_P0089664 Nkd1 protein_coding protein_coding MGP_LPJ_T0089665.1 MGP_LPJ_G0033827.1 mouse_genomes_project 8 89731131 89804750 + MGP_LPJ_P0089665 Nkd1 protein_coding protein_coding MGP_LPJ_T0089491.1 MGP_LPJ_G0033782.1 mouse_genomes_project 8 85889294 85901394 + MGP_LPJ_P0089491 Farsa protein_coding protein_coding MGP_LPJ_T0089492.1 MGP_LPJ_G0033782.1 mouse_genomes_project 8 85889300 85901393 + Farsa protein_coding retained_intron MGP_LPJ_T0089493.1 MGP_LPJ_G0033782.1 mouse_genomes_project 8 85889314 85899158 + Farsa protein_coding retained_intron MGP_LPJ_T0089494.1 MGP_LPJ_G0033782.1 mouse_genomes_project 8 85889322 85901394 + MGP_LPJ_P0089494 Farsa protein_coding protein_coding MGP_LPJ_T0089495.1 MGP_LPJ_G0033782.1 mouse_genomes_project 8 85889325 85901393 + MGP_LPJ_P0089495 Farsa protein_coding nonsense_mediated_decay MGP_LPJ_T0089496.1 MGP_LPJ_G0033782.1 mouse_genomes_project 8 85899699 85901147 + Farsa protein_coding retained_intron MGP_LPJ_T0090021.1 MGP_LPJ_G0033957.1 mouse_genomes_project 8 108142243 108191652 + Ctcf protein_coding processed_transcript MGP_LPJ_T0090022.1 MGP_LPJ_G0033957.1 mouse_genomes_project 8 108142254 108192927 + MGP_LPJ_P0090022 Ctcf protein_coding protein_coding MGP_LPJ_T0090023.1 MGP_LPJ_G0033957.1 mouse_genomes_project 8 108142610 108172757 + Ctcf protein_coding processed_transcript MGP_LPJ_T0090024.1 MGP_LPJ_G0033957.1 mouse_genomes_project 8 108142741 108172474 + Ctcf protein_coding processed_transcript MGP_LPJ_T0090025.1 MGP_LPJ_G0033957.1 mouse_genomes_project 8 108186033 108190622 + Ctcf protein_coding retained_intron MGP_LPJ_T0090026.1 MGP_LPJ_G0033957.1 mouse_genomes_project 8 108186033 108189590 + Ctcf protein_coding processed_transcript MGP_LPJ_T0090189.1 MGP_LPJ_G0034020.1 mouse_genomes_project 8 112792830 112802197 + MGP_LPJ_P0090189 Tat protein_coding protein_coding MGP_LPJ_T0090190.1 MGP_LPJ_G0034020.1 mouse_genomes_project 8 112792899 112797088 + MGP_LPJ_P0090190 Tat protein_coding protein_coding MGP_LPJ_T0090097.1 MGP_LPJ_G0033987.1 mouse_genomes_project 8 108979602 108990157 + MGP_LPJ_P0090097 Zfp90 protein_coding protein_coding MGP_LPJ_T0099778.1 MGP_LPJ_G0038041.1 mouse_genomes_project 8 86353683 86353790 + Gm22336 snRNA snRNA MGP_LPJ_T0010990.1 MGP_LPJ_G0009108.1 mouse_genomes_project 8 70390976 70391039 - Mir7066 miRNA miRNA MGP_LPJ_T0089979.1 MGP_LPJ_G0033939.1 mouse_genomes_project 8 107752888 107758183 + MGP_LPJ_P0089979 Nol3 protein_coding protein_coding MGP_LPJ_T0087895.1 MGP_LPJ_G0033279.1 mouse_genomes_project 8 9832716 9893121 - MGP_LPJ_P0087895 Tubgcp3 protein_coding protein_coding MGP_LPJ_T0087896.1 MGP_LPJ_G0033279.1 mouse_genomes_project 8 9832716 9892972 - MGP_LPJ_P0087896 Tubgcp3 protein_coding nonsense_mediated_decay MGP_LPJ_T0087897.1 MGP_LPJ_G0033279.1 mouse_genomes_project 8 9832718 9857759 - Tubgcp3 protein_coding retained_intron MGP_LPJ_T0087898.1 MGP_LPJ_G0033279.1 mouse_genomes_project 8 9833614 9857732 - Tubgcp3 protein_coding retained_intron MGP_LPJ_T0087899.1 MGP_LPJ_G0033279.1 mouse_genomes_project 8 9841639 9878273 - Tubgcp3 protein_coding retained_intron MGP_LPJ_T0087900.1 MGP_LPJ_G0033279.1 mouse_genomes_project 8 9850261 9892996 - Tubgcp3 protein_coding retained_intron MGP_LPJ_T0087901.1 MGP_LPJ_G0033279.1 mouse_genomes_project 8 9869681 9876551 - Tubgcp3 protein_coding retained_intron MGP_LPJ_T0087902.1 MGP_LPJ_G0033279.1 mouse_genomes_project 8 9874786 9878287 - MGP_LPJ_P0087902 Tubgcp3 protein_coding nonsense_mediated_decay MGP_LPJ_T0087903.1 MGP_LPJ_G0033279.1 mouse_genomes_project 8 9874821 9892832 - MGP_LPJ_P0087903 Tubgcp3 protein_coding nonsense_mediated_decay MGP_LPJ_T0089768.1 MGP_LPJ_G0033862.1 mouse_genomes_project 8 95701246 95704216 + MGP_LPJ_P0089768 Mt3 protein_coding protein_coding MGP_LPJ_T0089335.1 MGP_LPJ_G0033737.1 mouse_genomes_project 8 84271365 84319114 + MGP_LPJ_P0089335 Mgat4d protein_coding protein_coding MGP_LPJ_T0089336.1 MGP_LPJ_G0033737.1 mouse_genomes_project 8 84282888 84322099 + Mgat4d protein_coding processed_transcript MGP_LPJ_T0088030.1 MGP_LPJ_G0033313.1 mouse_genomes_project 8 12413951 12436142 + MGP_LPJ_P0088030 Kbtbd11 protein_coding protein_coding MGP_LPJ_T0088031.1 MGP_LPJ_G0033313.1 mouse_genomes_project 8 12414242 12429905 + Kbtbd11 protein_coding processed_transcript MGP_LPJ_T0088032.1 MGP_LPJ_G0033313.1 mouse_genomes_project 8 12430100 12436142 + MGP_LPJ_P0088032 Kbtbd11 protein_coding nonsense_mediated_decay MGP_LPJ_T0088033.1 MGP_LPJ_G0033313.1 mouse_genomes_project 8 12435201 12435773 + Kbtbd11 protein_coding processed_transcript MGP_LPJ_T0005394.1 MGP_LPJ_G0004572.1 mouse_genomes_project 8 69390214 69390926 + antisense antisense MGP_LPJ_T0089712.1 MGP_LPJ_G0033844.1 mouse_genomes_project 8 94292786 94361190 + MGP_LPJ_P0089712 Lpcat2 protein_coding protein_coding MGP_LPJ_T0089713.1 MGP_LPJ_G0033844.1 mouse_genomes_project 8 94292916 94310161 + Lpcat2 protein_coding processed_transcript MGP_LPJ_T0089715.1 MGP_LPJ_G0033844.1 mouse_genomes_project 8 94348125 94359951 + Lpcat2 protein_coding processed_transcript MGP_LPJ_T0090322.1 MGP_LPJ_G0034063.1 mouse_genomes_project 8 117533110 117542199 + MGP_LPJ_P0090322 Clec3a protein_coding protein_coding MGP_LPJ_T0011720.1 MGP_LPJ_G0009838.1 mouse_genomes_project 8 544997 545324 + Gm22204 misc_RNA misc_RNA MGP_LPJ_T0009146.1 MGP_LPJ_G0007358.1 mouse_genomes_project 8 88288352 88320354 - Gm10637 lincRNA lincRNA MGP_LPJ_T0009147.1 MGP_LPJ_G0007358.1 mouse_genomes_project 8 88315595 88320365 - Gm10637 lincRNA lincRNA MGP_LPJ_T0011033.1 MGP_LPJ_G0009151.1 mouse_genomes_project 8 113421630 113421727 - Gm44489 miRNA miRNA MGP_LPJ_T0009183.1 MGP_LPJ_G0007378.1 mouse_genomes_project 8 101219092 101227916 + lincRNA lincRNA MGP_LPJ_T0005415.1 MGP_LPJ_G0004589.1 mouse_genomes_project 8 115576723 115593011 - Gm26994 antisense antisense MGP_LPJ_T0089643.1 MGP_LPJ_G0033823.1 mouse_genomes_project 8 89309090 89345019 + MGP_LPJ_P0089643 Heatr3 protein_coding protein_coding MGP_LPJ_T0089644.1 MGP_LPJ_G0033823.1 mouse_genomes_project 8 89309091 89344989 + MGP_LPJ_P0089644 Heatr3 protein_coding protein_coding MGP_LPJ_T0089645.1 MGP_LPJ_G0033823.1 mouse_genomes_project 8 89330271 89331956 + Heatr3 protein_coding retained_intron MGP_LPJ_T0089646.1 MGP_LPJ_G0033823.1 mouse_genomes_project 8 89334709 89345019 + Heatr3 protein_coding retained_intron MGP_LPJ_T0089647.1 MGP_LPJ_G0033823.1 mouse_genomes_project 8 89337665 89340014 + Heatr3 protein_coding retained_intron MGP_LPJ_T0088471.1 MGP_LPJ_G0033477.1 mouse_genomes_project 8 42695120 42748862 - MGP_LPJ_P0088471 Adam34 protein_coding protein_coding MGP_LPJ_T0087764.1 MGP_LPJ_G0033231.1 mouse_genomes_project 8 606186 611144 + MGP_LPJ_P0087764 Trappc5 protein_coding protein_coding MGP_LPJ_T0101063.1 MGP_LPJ_G0039326.1 mouse_genomes_project 8 121496042 121496172 + Gm25200 snoRNA snoRNA MGP_LPJ_T0009115.1 MGP_LPJ_G0007330.1 mouse_genomes_project 8 46456796 46620900 - lincRNA lincRNA MGP_LPJ_T0088459.1 MGP_LPJ_G0033470.1 mouse_genomes_project 8 40105629 40208355 + MGP_LPJ_P0088459 Pcm1 protein_coding protein_coding MGP_LPJ_T0088460.1 MGP_LPJ_G0033470.1 mouse_genomes_project 8 40123923 40208242 + MGP_LPJ_P0088460 Pcm1 protein_coding unknown_likely_coding MGP_LPJ_T0005434.1 MGP_LPJ_G0004607.1 mouse_genomes_project 8 130549404 130574471 + Gm26759 antisense antisense MGP_LPJ_T0099796.1 MGP_LPJ_G0038059.1 mouse_genomes_project 8 126186713 126186820 - Gm26497 snRNA snRNA MGP_LPJ_T0088181.1 MGP_LPJ_G0033382.1 mouse_genomes_project 8 22667056 22677773 - MGP_LPJ_P0088181 Adam3 protein_coding protein_coding MGP_LPJ_T0088182.1 MGP_LPJ_G0033382.1 mouse_genomes_project 8 22667063 22721521 - MGP_LPJ_P0088182 Adam3 protein_coding protein_coding MGP_LPJ_T0088183.1 MGP_LPJ_G0033382.1 mouse_genomes_project 8 22667132 22721467 - MGP_LPJ_P0088183 Adam3 protein_coding nonsense_mediated_decay MGP_LPJ_T0088184.1 MGP_LPJ_G0033382.1 mouse_genomes_project 8 22670585 22721457 - MGP_LPJ_P0088184 Adam3 protein_coding protein_coding MGP_LPJ_T0088185.1 MGP_LPJ_G0033382.1 mouse_genomes_project 8 22698422 22721457 - MGP_LPJ_P0088185 Adam3 protein_coding protein_coding MGP_LPJ_T0088186.1 MGP_LPJ_G0033382.1 mouse_genomes_project 8 22710718 22721454 - Adam3 protein_coding processed_transcript MGP_LPJ_T0088187.1 MGP_LPJ_G0033382.1 mouse_genomes_project 8 22710792 22721469 - Adam3 protein_coding processed_transcript MGP_LPJ_T0088188.1 MGP_LPJ_G0033382.1 mouse_genomes_project 8 22710793 22721494 - Adam3 protein_coding processed_transcript MGP_LPJ_T0088189.1 MGP_LPJ_G0033382.1 mouse_genomes_project 8 22710832 22721457 - MGP_LPJ_P0088189 Adam3 protein_coding nonsense_mediated_decay MGP_LPJ_T0088190.1 MGP_LPJ_G0033382.1 mouse_genomes_project 8 22710857 22721451 - MGP_LPJ_P0088190 Adam3 protein_coding nonsense_mediated_decay MGP_LPJ_T0010974.1 MGP_LPJ_G0009092.1 mouse_genomes_project 8 17095700 17095790 - Gm27852 miRNA miRNA MGP_LPJ_T0089886.1 MGP_LPJ_G0033903.1 mouse_genomes_project 8 100802025 101218878 - MGP_LPJ_P0089886 Cdh8 protein_coding protein_coding MGP_LPJ_T0089887.1 MGP_LPJ_G0033903.1 mouse_genomes_project 8 100802436 101218878 - MGP_LPJ_P0089887 Cdh8 protein_coding protein_coding MGP_LPJ_T0089888.1 MGP_LPJ_G0033903.1 mouse_genomes_project 8 100806323 101218890 - MGP_LPJ_P0089888 Cdh8 protein_coding protein_coding MGP_LPJ_T0089889.1 MGP_LPJ_G0033903.1 mouse_genomes_project 8 100806515 101218922 - MGP_LPJ_P0089889 Cdh8 protein_coding protein_coding MGP_LPJ_T0089890.1 MGP_LPJ_G0033903.1 mouse_genomes_project 8 100806515 101218770 - MGP_LPJ_P0089890 Cdh8 protein_coding nonsense_mediated_decay MGP_LPJ_T0089891.1 MGP_LPJ_G0033903.1 mouse_genomes_project 8 100958696 101072757 - Cdh8 protein_coding retained_intron MGP_LPJ_T0089892.1 MGP_LPJ_G0033903.1 mouse_genomes_project 8 101012550 101218890 - MGP_LPJ_P0089892 Cdh8 protein_coding protein_coding MGP_LPJ_T0088139.1 MGP_LPJ_G0033369.1 mouse_genomes_project 8 20723673 20814422 + MGP_LPJ_P0088139 Kat6a protein_coding protein_coding MGP_LPJ_T0088140.1 MGP_LPJ_G0033369.1 mouse_genomes_project 8 20723687 20814422 + MGP_LPJ_P0088140 Kat6a protein_coding protein_coding MGP_LPJ_T0088141.1 MGP_LPJ_G0033369.1 mouse_genomes_project 8 20781019 20790892 + Kat6a protein_coding processed_transcript MGP_LPJ_T0005410.1 MGP_LPJ_G0004585.1 mouse_genomes_project 8 111650304 111655592 - Gm20686 antisense antisense MGP_LPJ_T0090649.1 MGP_LPJ_G0034154.1 mouse_genomes_project 8 127005447 127058243 - MGP_LPJ_P0090649 Fanca protein_coding protein_coding MGP_LPJ_T0090650.1 MGP_LPJ_G0034154.1 mouse_genomes_project 8 127006437 127011373 - Fanca protein_coding processed_transcript MGP_LPJ_T0090651.1 MGP_LPJ_G0034154.1 mouse_genomes_project 8 127008352 127016755 - MGP_LPJ_P0090651 Fanca protein_coding protein_coding MGP_LPJ_T0090652.1 MGP_LPJ_G0034154.1 mouse_genomes_project 8 127011307 127014345 - MGP_LPJ_P0090652 Fanca protein_coding protein_coding MGP_LPJ_T0090653.1 MGP_LPJ_G0034154.1 mouse_genomes_project 8 127015279 127021466 - Fanca protein_coding retained_intron MGP_LPJ_T0090654.1 MGP_LPJ_G0034154.1 mouse_genomes_project 8 127024953 127058227 - Fanca protein_coding retained_intron MGP_LPJ_T0090655.1 MGP_LPJ_G0034154.1 mouse_genomes_project 8 127025172 127051007 - MGP_LPJ_P0090655 Fanca protein_coding protein_coding MGP_LPJ_T0090656.1 MGP_LPJ_G0034154.1 mouse_genomes_project 8 127028130 127031037 - Fanca protein_coding retained_intron MGP_LPJ_T0090657.1 MGP_LPJ_G0034154.1 mouse_genomes_project 8 127041251 127058227 - MGP_LPJ_P0090657 Fanca protein_coding protein_coding MGP_LPJ_T0090658.1 MGP_LPJ_G0034154.1 mouse_genomes_project 8 127049932 127058227 - Fanca protein_coding retained_intron MGP_LPJ_T0088416.1 MGP_LPJ_G0033462.1 mouse_genomes_project 8 39315688 39336037 - MGP_LPJ_P0088416 Cnot7 protein_coding protein_coding MGP_LPJ_T0088417.1 MGP_LPJ_G0033462.1 mouse_genomes_project 8 39315690 39340149 - MGP_LPJ_P0088417 Cnot7 protein_coding protein_coding MGP_LPJ_T0088418.1 MGP_LPJ_G0033462.1 mouse_genomes_project 8 39315691 39336001 - Cnot7 protein_coding retained_intron MGP_LPJ_T0088419.1 MGP_LPJ_G0033462.1 mouse_genomes_project 8 39315695 39336001 - MGP_LPJ_P0088419 Cnot7 protein_coding protein_coding MGP_LPJ_T0088420.1 MGP_LPJ_G0033462.1 mouse_genomes_project 8 39316185 39335586 - MGP_LPJ_P0088420 Cnot7 protein_coding protein_coding MGP_LPJ_T0088421.1 MGP_LPJ_G0033462.1 mouse_genomes_project 8 39317163 39325398 - Cnot7 protein_coding processed_transcript MGP_LPJ_T0088422.1 MGP_LPJ_G0033462.1 mouse_genomes_project 8 39320088 39331989 - Cnot7 protein_coding retained_intron MGP_LPJ_T0088424.1 MGP_LPJ_G0033462.1 mouse_genomes_project 8 39325058 39331906 - Cnot7 protein_coding processed_transcript MGP_LPJ_T0088425.1 MGP_LPJ_G0033462.1 mouse_genomes_project 8 39331638 39336005 - Cnot7 protein_coding processed_transcript MGP_LPJ_T0088426.1 MGP_LPJ_G0033462.1 mouse_genomes_project 8 39334307 39340137 - Cnot7 protein_coding processed_transcript MGP_LPJ_T0088427.1 MGP_LPJ_G0033462.1 mouse_genomes_project 8 39334387 39335586 - Cnot7 protein_coding processed_transcript MGP_LPJ_T0088382.1 MGP_LPJ_G0033451.1 mouse_genomes_project 8 34704420 34757590 + MGP_LPJ_P0088382 D8Ertd82e protein_coding protein_coding MGP_LPJ_T0088383.1 MGP_LPJ_G0033451.1 mouse_genomes_project 8 34704453 34716202 + D8Ertd82e protein_coding retained_intron MGP_LPJ_T0088384.1 MGP_LPJ_G0033451.1 mouse_genomes_project 8 34704453 34712339 + D8Ertd82e protein_coding retained_intron MGP_LPJ_T0011015.1 MGP_LPJ_G0009133.1 mouse_genomes_project 8 87684417 87684542 + Gm44348 miRNA miRNA MGP_LPJ_T0011046.1 MGP_LPJ_G0009164.1 mouse_genomes_project 8 126308619 126308730 - Mir6396 miRNA miRNA MGP_LPJ_T0005427.1 MGP_LPJ_G0004600.1 mouse_genomes_project 8 125594340 125595312 - Gm27011 antisense antisense MGP_LPJ_T0009186.1 MGP_LPJ_G0007381.1 mouse_genomes_project 8 108130107 108143026 - Gm5914 lincRNA lincRNA MGP_LPJ_T0009187.1 MGP_LPJ_G0007381.1 mouse_genomes_project 8 108130121 108143161 - Gm5914 lincRNA lincRNA MGP_LPJ_T0087941.1 MGP_LPJ_G0033284.1 mouse_genomes_project 8 10297858 10311754 + MGP_LPJ_P0087941 Proz protein_coding protein_coding MGP_LPJ_T0089476.1 MGP_LPJ_G0033776.1 mouse_genomes_project 8 85752236 85756076 + MGP_LPJ_P0089476 G430095P16Rik protein_coding protein_coding MGP_LPJ_T0088066.1 MGP_LPJ_G0033324.1 mouse_genomes_project 8 16580749 16589647 - MGP_LPJ_P0088066 Defb39 protein_coding protein_coding MGP_LPJ_T0009079.1 MGP_LPJ_G0007302.1 mouse_genomes_project 8 4320540 4369055 + Gm17215 lincRNA lincRNA MGP_LPJ_T0099797.1 MGP_LPJ_G0038060.1 mouse_genomes_project 8 126689990 126690097 - Gm24445 snRNA snRNA MGP_LPJ_T0087875.1 MGP_LPJ_G0033270.1 mouse_genomes_project 8 8695877 8704791 + MGP_LPJ_P0087875 Ing1 protein_coding protein_coding MGP_LPJ_T0009179.1 MGP_LPJ_G0007376.1 mouse_genomes_project 8 95946327 95948029 + Gm15889 lincRNA lincRNA MGP_LPJ_T0002357.1 MGP_LPJ_G0002265.1 mouse_genomes_project 8 85190544 85192724 + TEC TEC MGP_LPJ_T0089797.1 MGP_LPJ_G0033874.1 mouse_genomes_project 8 96332434 96338519 + MGP_LPJ_P0089797 Ccl22 protein_coding protein_coding MGP_LPJ_T0089798.1 MGP_LPJ_G0033874.1 mouse_genomes_project 8 96332524 96336693 + Ccl22 protein_coding processed_transcript MGP_LPJ_T0088844.1 MGP_LPJ_G0033587.1 mouse_genomes_project 8 70110515 70151854 + MGP_LPJ_P0088844 Pbx4 protein_coding protein_coding MGP_LPJ_T0088845.1 MGP_LPJ_G0033587.1 mouse_genomes_project 8 70110648 70137494 + Pbx4 protein_coding retained_intron MGP_LPJ_T0088846.1 MGP_LPJ_G0033587.1 mouse_genomes_project 8 70110661 70151854 + MGP_LPJ_P0088846 Pbx4 protein_coding nonsense_mediated_decay MGP_LPJ_T0088847.1 MGP_LPJ_G0033587.1 mouse_genomes_project 8 70110684 70150248 + MGP_LPJ_P0088847 Pbx4 protein_coding protein_coding MGP_LPJ_T0088848.1 MGP_LPJ_G0033587.1 mouse_genomes_project 8 70110686 70151854 + MGP_LPJ_P0088848 Pbx4 protein_coding nonsense_mediated_decay MGP_LPJ_T0088849.1 MGP_LPJ_G0033587.1 mouse_genomes_project 8 70110714 70151854 + MGP_LPJ_P0088849 Pbx4 protein_coding nonsense_mediated_decay MGP_LPJ_T0088850.1 MGP_LPJ_G0033587.1 mouse_genomes_project 8 70126167 70144619 + Pbx4 protein_coding processed_transcript MGP_LPJ_T0088851.1 MGP_LPJ_G0033587.1 mouse_genomes_project 8 70145757 70150200 + Pbx4 protein_coding retained_intron MGP_LPJ_T0088852.1 MGP_LPJ_G0033587.1 mouse_genomes_project 8 70145954 70151854 + Pbx4 protein_coding retained_intron MGP_LPJ_T0089900.1 MGP_LPJ_G0033907.1 mouse_genomes_project 8 106520863 106545353 - MGP_LPJ_P0089900 Tk2 protein_coding protein_coding MGP_LPJ_T0088746.1 MGP_LPJ_G0033557.1 mouse_genomes_project 8 65141854 65144323 + MGP_LPJ_P0088746 Gm10663 protein_coding protein_coding MGP_LPJ_T0098679.1 MGP_LPJ_G0036948.1 mouse_genomes_project 8 123611352 123614029 + Gm15898 sense_intronic sense_intronic MGP_LPJ_T0088599.1 MGP_LPJ_G0033512.1 mouse_genomes_project 8 47019710 47197657 - MGP_LPJ_P0088599 Wwc2 protein_coding protein_coding MGP_LPJ_T0088740.1 MGP_LPJ_G0033554.1 mouse_genomes_project 8 65041241 65047236 - MGP_LPJ_P0088740 Trim75 protein_coding protein_coding MGP_LPJ_T0089349.1 MGP_LPJ_G0033745.1 mouse_genomes_project 8 84616516 84645929 - MGP_LPJ_P0089349 Pkn1 protein_coding protein_coding MGP_LPJ_T0089350.1 MGP_LPJ_G0033745.1 mouse_genomes_project 8 84616845 84640820 - MGP_LPJ_P0089350 Pkn1 protein_coding protein_coding MGP_LPJ_T0089351.1 MGP_LPJ_G0033745.1 mouse_genomes_project 8 84616853 84645847 - MGP_LPJ_P0089351 Pkn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0089352.1 MGP_LPJ_G0033745.1 mouse_genomes_project 8 84616881 84622285 - Pkn1 protein_coding retained_intron MGP_LPJ_T0089353.1 MGP_LPJ_G0033745.1 mouse_genomes_project 8 84617341 84618535 - Pkn1 protein_coding processed_transcript MGP_LPJ_T0089354.1 MGP_LPJ_G0033745.1 mouse_genomes_project 8 84619781 84620348 - Pkn1 protein_coding retained_intron MGP_LPJ_T0089355.1 MGP_LPJ_G0033745.1 mouse_genomes_project 8 84620234 84624525 - Pkn1 protein_coding processed_transcript MGP_LPJ_T0089356.1 MGP_LPJ_G0033745.1 mouse_genomes_project 8 84624473 84628324 - Pkn1 protein_coding retained_intron MGP_LPJ_T0089357.1 MGP_LPJ_G0033745.1 mouse_genomes_project 8 84636675 84645917 - Pkn1 protein_coding retained_intron MGP_LPJ_T0089286.1 MGP_LPJ_G0033720.1 mouse_genomes_project 8 80399116 80438325 + MGP_LPJ_P0089286 Otud4 protein_coding protein_coding MGP_LPJ_T0089287.1 MGP_LPJ_G0033720.1 mouse_genomes_project 8 80399202 80438273 + MGP_LPJ_P0089287 Otud4 protein_coding protein_coding MGP_LPJ_T0089288.1 MGP_LPJ_G0033720.1 mouse_genomes_project 8 80411317 80419821 + Otud4 protein_coding retained_intron MGP_LPJ_T0089289.1 MGP_LPJ_G0033720.1 mouse_genomes_project 8 80411729 80421844 + Otud4 protein_coding retained_intron MGP_LPJ_T0089290.1 MGP_LPJ_G0033720.1 mouse_genomes_project 8 80421684 80429090 + MGP_LPJ_P0089290 Otud4 protein_coding protein_coding MGP_LPJ_T0089291.1 MGP_LPJ_G0033720.1 mouse_genomes_project 8 80427423 80431979 + MGP_LPJ_P0089291 Otud4 protein_coding protein_coding MGP_LPJ_T0101012.1 MGP_LPJ_G0039275.1 mouse_genomes_project 8 15994402 15994533 - Gm24469 snoRNA snoRNA MGP_LPJ_T0087770.1 MGP_LPJ_G0033235.1 mouse_genomes_project 8 779344 785689 - MGP_LPJ_P0087770 Cd209e protein_coding protein_coding MGP_LPJ_T0089791.1 MGP_LPJ_G0033871.1 mouse_genomes_project 8 96183411 96240622 + MGP_LPJ_P0089791 Rspry1 protein_coding protein_coding MGP_LPJ_T0089792.1 MGP_LPJ_G0033871.1 mouse_genomes_project 8 96183434 96204365 + MGP_LPJ_P0089792 Rspry1 protein_coding protein_coding MGP_LPJ_T0089793.1 MGP_LPJ_G0033871.1 mouse_genomes_project 8 96207490 96211043 + Rspry1 protein_coding retained_intron MGP_LPJ_T0098381.1 MGP_LPJ_G0036662.1 mouse_genomes_project 8 733316 733606 - Rprl2 ribozyme ribozyme MGP_LPJ_T0087938.1 MGP_LPJ_G0033283.1 mouse_genomes_project 8 10272962 10292776 + MGP_LPJ_P0087938 F10 protein_coding protein_coding MGP_LPJ_T0087939.1 MGP_LPJ_G0033283.1 mouse_genomes_project 8 10273227 10281894 + MGP_LPJ_P0087939 F10 protein_coding protein_coding MGP_LPJ_T0087940.1 MGP_LPJ_G0033283.1 mouse_genomes_project 8 10273478 10292758 + MGP_LPJ_P0087940 F10 protein_coding protein_coding MGP_LPJ_T0002369.1 MGP_LPJ_G0002276.1 mouse_genomes_project 8 125591729 125592528 - TEC TEC MGP_LPJ_T0101009.1 MGP_LPJ_G0039272.1 mouse_genomes_project 8 11636273 11636409 - Gm26184 snoRNA snoRNA MGP_LPJ_T0087987.1 MGP_LPJ_G0033299.1 mouse_genomes_project 8 11003464 11030445 + MGP_LPJ_P0087987 4932443I19Rik protein_coding protein_coding MGP_LPJ_T0087988.1 MGP_LPJ_G0033299.1 mouse_genomes_project 8 11003539 11030088 + MGP_LPJ_P0087988 4932443I19Rik protein_coding unknown_likely_coding MGP_LPJ_T0090292.1 MGP_LPJ_G0034051.1 mouse_genomes_project 8 114873366 114898521 - MGP_LPJ_P0090292 Chst5 protein_coding protein_coding MGP_LPJ_T0015893.1 MGP_LPJ_G0013984.1 mouse_genomes_project 8 890495 908583 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010971.1 MGP_LPJ_G0009089.1 mouse_genomes_project 8 11213201 11213295 + miRNA miRNA MGP_LPJ_T0011020.1 MGP_LPJ_G0009138.1 mouse_genomes_project 8 96073570 96073630 + Mir7072 miRNA miRNA MGP_LPJ_T0088466.1 MGP_LPJ_G0033472.1 mouse_genomes_project 8 40274939 40296767 - MGP_LPJ_P0088466 Frg1 protein_coding protein_coding MGP_LPJ_T0101051.1 MGP_LPJ_G0039314.1 mouse_genomes_project 8 97385435 97385571 - Gm26493 snoRNA snoRNA MGP_LPJ_T0087968.1 MGP_LPJ_G0033291.1 mouse_genomes_project 8 10534117 10574706 + MGP_LPJ_P0087968 Tmco3 protein_coding protein_coding MGP_LPJ_T0087969.1 MGP_LPJ_G0033291.1 mouse_genomes_project 8 10534275 10572977 + MGP_LPJ_P0087969 Tmco3 protein_coding unknown_likely_coding MGP_LPJ_T0011732.1 MGP_LPJ_G0009850.1 mouse_genomes_project 8 45200940 45201213 + Gm23030 misc_RNA misc_RNA MGP_LPJ_T0089551.1 MGP_LPJ_G0033797.1 mouse_genomes_project 8 86109720 86118556 + MGP_LPJ_P0089551 Fbxw9 protein_coding protein_coding MGP_LPJ_T0089552.1 MGP_LPJ_G0033797.1 mouse_genomes_project 8 86109721 86118558 + Fbxw9 protein_coding retained_intron MGP_LPJ_T0089553.1 MGP_LPJ_G0033797.1 mouse_genomes_project 8 86109762 86116241 + Fbxw9 protein_coding retained_intron MGP_LPJ_T0089554.1 MGP_LPJ_G0033797.1 mouse_genomes_project 8 86110194 86118551 + Fbxw9 protein_coding retained_intron MGP_LPJ_T0089555.1 MGP_LPJ_G0033797.1 mouse_genomes_project 8 86110232 86118321 + Fbxw9 protein_coding processed_transcript MGP_LPJ_T0089556.1 MGP_LPJ_G0033797.1 mouse_genomes_project 8 86116023 86117765 + Fbxw9 protein_coding retained_intron MGP_LPJ_T0089557.1 MGP_LPJ_G0033797.1 mouse_genomes_project 8 86117007 86117802 + Fbxw9 protein_coding processed_transcript MGP_LPJ_T0089558.1 MGP_LPJ_G0033797.1 mouse_genomes_project 8 86117061 86117804 + Fbxw9 protein_coding retained_intron MGP_LPJ_T0089559.1 MGP_LPJ_G0033797.1 mouse_genomes_project 8 86117502 86118338 + Fbxw9 protein_coding retained_intron MGP_LPJ_T0089133.1 MGP_LPJ_G0033668.1 mouse_genomes_project 8 72062349 72078139 + MGP_LPJ_P0089133 Jak3 protein_coding protein_coding MGP_LPJ_T0089134.1 MGP_LPJ_G0033668.1 mouse_genomes_project 8 72062349 72076119 + MGP_LPJ_P0089134 Jak3 protein_coding protein_coding MGP_LPJ_T0089135.1 MGP_LPJ_G0033668.1 mouse_genomes_project 8 72062605 72067887 + Jak3 protein_coding retained_intron MGP_LPJ_T0089136.1 MGP_LPJ_G0033668.1 mouse_genomes_project 8 72063602 72076121 + MGP_LPJ_P0089136 Jak3 protein_coding protein_coding MGP_LPJ_T0089137.1 MGP_LPJ_G0033668.1 mouse_genomes_project 8 72064386 72077788 + Jak3 protein_coding retained_intron MGP_LPJ_T0089984.1 MGP_LPJ_G0033943.1 mouse_genomes_project 8 107781691 107786720 + MGP_LPJ_P0089984 Elmo3 protein_coding protein_coding MGP_LPJ_T0089582.1 MGP_LPJ_G0033803.1 mouse_genomes_project 8 86165137 86178917 - MGP_LPJ_P0089582 Zfp791 protein_coding protein_coding MGP_LPJ_T0005429.1 MGP_LPJ_G0004602.1 mouse_genomes_project 8 127635202 127637436 - 2810455O05Rik antisense antisense MGP_LPJ_T0015912.1 MGP_LPJ_G0014003.1 mouse_genomes_project 8 18704476 18711650 - processed_pseudogene processed_pseudogene MGP_LPJ_T0090043.1 MGP_LPJ_G0033968.1 mouse_genomes_project 8 108389607 108413037 + MGP_LPJ_P0090043 Nutf2-ps1 protein_coding protein_coding MGP_LPJ_T0005406.1 MGP_LPJ_G0004582.1 mouse_genomes_project 8 108061548 108063920 + Gm38250 antisense antisense MGP_LPJ_T0005407.1 MGP_LPJ_G0004582.1 mouse_genomes_project 8 108061575 108074489 + Gm38250 antisense antisense MGP_LPJ_T0090736.1 MGP_LPJ_G0034183.1 mouse_genomes_project 8 128766813 128774229 - MGP_LPJ_P0090736 Exoc8 protein_coding protein_coding MGP_LPJ_T0087730.1 MGP_LPJ_G0033224.1 mouse_genomes_project 8 516402 538543 + MGP_LPJ_P0087730 Camsap3 protein_coding protein_coding MGP_LPJ_T0087731.1 MGP_LPJ_G0033224.1 mouse_genomes_project 8 516402 538543 + MGP_LPJ_P0087731 Camsap3 protein_coding protein_coding MGP_LPJ_T0087732.1 MGP_LPJ_G0033224.1 mouse_genomes_project 8 516705 538518 + MGP_LPJ_P0087732 Camsap3 protein_coding unknown_likely_coding MGP_LPJ_T0011729.1 MGP_LPJ_G0009847.1 mouse_genomes_project 8 24318450 24318709 - Gm22227 misc_RNA misc_RNA MGP_LPJ_T0015914.1 MGP_LPJ_G0014005.1 mouse_genomes_project 8 20072224 20072515 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015967.1 MGP_LPJ_G0014058.1 mouse_genomes_project 8 124298069 124298750 + processed_pseudogene processed_pseudogene MGP_LPJ_T0089719.1 MGP_LPJ_G0033848.1 mouse_genomes_project 8 94504769 94528882 - MGP_LPJ_P0089719 Ces1b protein_coding protein_coding MGP_LPJ_T0089111.1 MGP_LPJ_G0033663.1 mouse_genomes_project 8 71951409 71970287 + MGP_LPJ_P0089111 Slc27a1 protein_coding protein_coding MGP_LPJ_T0089010.1 MGP_LPJ_G0033630.1 mouse_genomes_project 8 71039779 71066187 + MGP_LPJ_P0089010 Pde4c protein_coding protein_coding MGP_LPJ_T0089011.1 MGP_LPJ_G0033630.1 mouse_genomes_project 8 71040123 71071318 + MGP_LPJ_P0089011 Pde4c protein_coding protein_coding MGP_LPJ_T0089012.1 MGP_LPJ_G0033630.1 mouse_genomes_project 8 71040124 71071303 + MGP_LPJ_P0089012 Pde4c protein_coding protein_coding MGP_LPJ_T0089013.1 MGP_LPJ_G0033630.1 mouse_genomes_project 8 71047111 71066034 + Pde4c protein_coding processed_transcript MGP_LPJ_T0089014.1 MGP_LPJ_G0033630.1 mouse_genomes_project 8 71063219 71070605 + Pde4c protein_coding retained_intron MGP_LPJ_T0089015.1 MGP_LPJ_G0033630.1 mouse_genomes_project 8 71068023 71070945 + Pde4c protein_coding retained_intron MGP_LPJ_T0088854.1 MGP_LPJ_G0033589.1 mouse_genomes_project 8 70167228 70173398 - MGP_LPJ_P0088854 Yjefn3 protein_coding unknown_likely_coding MGP_LPJ_T0088855.1 MGP_LPJ_G0033589.1 mouse_genomes_project 8 70167235 70181945 - MGP_LPJ_P0088855 Yjefn3 protein_coding protein_coding MGP_LPJ_T0088856.1 MGP_LPJ_G0033589.1 mouse_genomes_project 8 70167235 70170404 - MGP_LPJ_P0088856 Yjefn3 protein_coding protein_coding MGP_LPJ_T0088857.1 MGP_LPJ_G0033589.1 mouse_genomes_project 8 70167237 70167623 - Yjefn3 protein_coding processed_transcript MGP_LPJ_T0089321.1 MGP_LPJ_G0033730.1 mouse_genomes_project 8 83229038 83303842 - MGP_LPJ_P0089321 Il15 protein_coding protein_coding MGP_LPJ_T0087853.1 MGP_LPJ_G0033261.1 mouse_genomes_project 8 7032197 7046646 + MGP_LPJ_P0087853 Abhd13 protein_coding protein_coding MGP_LPJ_T0087854.1 MGP_LPJ_G0033261.1 mouse_genomes_project 8 7032207 7046646 + MGP_LPJ_P0087854 Abhd13 protein_coding protein_coding MGP_LPJ_T0009150.1 MGP_LPJ_G0007361.1 mouse_genomes_project 8 88599852 88600844 + 4930535O05Rik lincRNA lincRNA MGP_LPJ_T0090290.1 MGP_LPJ_G0034049.1 mouse_genomes_project 8 114737529 114835782 - MGP_LPJ_P0090290 Cfdp1 protein_coding protein_coding MGP_LPJ_T0089862.1 MGP_LPJ_G0033896.1 mouse_genomes_project 8 97179985 97196191 - MGP_LPJ_P0089862 Prss54 protein_coding protein_coding MGP_LPJ_T0089863.1 MGP_LPJ_G0033896.1 mouse_genomes_project 8 97180144 97195933 - MGP_LPJ_P0089863 Prss54 protein_coding protein_coding MGP_LPJ_T0087998.1 MGP_LPJ_G0033304.1 mouse_genomes_project 8 11235268 11236066 + MGP_LPJ_P0087998 protein_coding protein_coding MGP_LPJ_T0090034.1 MGP_LPJ_G0033961.1 mouse_genomes_project 8 108213627 108217905 - MGP_LPJ_P0090034 Enkd1 protein_coding protein_coding MGP_LPJ_T0087718.1 MGP_LPJ_G0033221.1 mouse_genomes_project 8 423861 439550 + MGP_LPJ_P0087718 Mcoln1 protein_coding protein_coding MGP_LPJ_T0087719.1 MGP_LPJ_G0033221.1 mouse_genomes_project 8 423908 431259 + MGP_LPJ_P0087719 Mcoln1 protein_coding protein_coding MGP_LPJ_T0087720.1 MGP_LPJ_G0033221.1 mouse_genomes_project 8 430096 439550 + Mcoln1 protein_coding retained_intron MGP_LPJ_T0087721.1 MGP_LPJ_G0033221.1 mouse_genomes_project 8 434984 437340 + Mcoln1 protein_coding retained_intron MGP_LPJ_T0087722.1 MGP_LPJ_G0033221.1 mouse_genomes_project 8 435913 437125 + Mcoln1 protein_coding retained_intron MGP_LPJ_T0087723.1 MGP_LPJ_G0033221.1 mouse_genomes_project 8 436999 439542 + Mcoln1 protein_coding retained_intron MGP_LPJ_T0087724.1 MGP_LPJ_G0033221.1 mouse_genomes_project 8 438879 439550 + Mcoln1 protein_coding retained_intron MGP_LPJ_T0088727.1 MGP_LPJ_G0033548.1 mouse_genomes_project 8 63922626 63955040 - MGP_LPJ_P0088727 Sgol2b protein_coding protein_coding MGP_LPJ_T0011043.1 MGP_LPJ_G0009161.1 mouse_genomes_project 8 124091673 124091732 + Mir7687 miRNA miRNA MGP_LPJ_T0088360.1 MGP_LPJ_G0033439.1 mouse_genomes_project 8 32544798 32549514 - Dctn6 protein_coding retained_intron MGP_LPJ_T0088361.1 MGP_LPJ_G0033439.1 mouse_genomes_project 8 32544801 32563400 - MGP_LPJ_P0088361 Dctn6 protein_coding protein_coding MGP_LPJ_T0088362.1 MGP_LPJ_G0033439.1 mouse_genomes_project 8 32544941 32563140 - MGP_LPJ_P0088362 Dctn6 protein_coding protein_coding MGP_LPJ_T0088363.1 MGP_LPJ_G0033439.1 mouse_genomes_project 8 32544956 32562418 - Dctn6 protein_coding processed_transcript MGP_LPJ_T0088364.1 MGP_LPJ_G0033439.1 mouse_genomes_project 8 32544974 32560595 - MGP_LPJ_P0088364 Dctn6 protein_coding protein_coding MGP_LPJ_T0088365.1 MGP_LPJ_G0033439.1 mouse_genomes_project 8 32544985 32547314 - Dctn6 protein_coding retained_intron MGP_LPJ_T0088366.1 MGP_LPJ_G0033439.1 mouse_genomes_project 8 32545016 32562456 - MGP_LPJ_P0088366 Dctn6 protein_coding protein_coding MGP_LPJ_T0088367.1 MGP_LPJ_G0033439.1 mouse_genomes_project 8 32546899 32553087 - Dctn6 protein_coding retained_intron MGP_LPJ_T0088368.1 MGP_LPJ_G0033439.1 mouse_genomes_project 8 32549173 32563081 - Dctn6 protein_coding retained_intron MGP_LPJ_T0088369.1 MGP_LPJ_G0033439.1 mouse_genomes_project 8 32549387 32563067 - MGP_LPJ_P0088369 Dctn6 protein_coding protein_coding MGP_LPJ_T0009140.1 MGP_LPJ_G0007352.1 mouse_genomes_project 8 85686699 85691801 + Gm26664 lincRNA lincRNA MGP_LPJ_T0089402.1 MGP_LPJ_G0033760.1 mouse_genomes_project 8 85050364 85082239 + MGP_LPJ_P0089402 Rfx1 protein_coding protein_coding MGP_LPJ_T0015927.1 MGP_LPJ_G0014018.1 mouse_genomes_project 8 39712118 39718098 - processed_pseudogene processed_pseudogene MGP_LPJ_T0090177.1 MGP_LPJ_G0034016.1 mouse_genomes_project 8 112515682 112526966 - MGP_LPJ_P0090177 Atxn1l protein_coding protein_coding MGP_LPJ_T0089283.1 MGP_LPJ_G0033719.1 mouse_genomes_project 8 80086320 80148213 - MGP_LPJ_P0089283 Smad1 protein_coding protein_coding MGP_LPJ_T0089284.1 MGP_LPJ_G0033719.1 mouse_genomes_project 8 80089501 80148213 - MGP_LPJ_P0089284 Smad1 protein_coding protein_coding MGP_LPJ_T0089285.1 MGP_LPJ_G0033719.1 mouse_genomes_project 8 80103277 80148213 - MGP_LPJ_P0089285 Smad1 protein_coding protein_coding MGP_LPJ_T0090591.1 MGP_LPJ_G0034141.1 mouse_genomes_project 8 126545401 126564598 + MGP_LPJ_P0090591 Cdh15 protein_coding protein_coding MGP_LPJ_T0009093.1 MGP_LPJ_G0007312.1 mouse_genomes_project 8 22401641 22419331 + Gm26714 lincRNA lincRNA MGP_LPJ_T0089996.1 MGP_LPJ_G0033948.1 mouse_genomes_project 8 107857135 107866340 + MGP_LPJ_P0089996 Plekhg4 protein_coding unknown_likely_coding MGP_LPJ_T0089997.1 MGP_LPJ_G0033948.1 mouse_genomes_project 8 107857372 107859659 + MGP_LPJ_P0089997 Plekhg4 protein_coding protein_coding MGP_LPJ_T0089998.1 MGP_LPJ_G0033948.1 mouse_genomes_project 8 107859002 107866958 + MGP_LPJ_P0089998 Plekhg4 protein_coding nonsense_mediated_decay MGP_LPJ_T0089999.1 MGP_LPJ_G0033948.1 mouse_genomes_project 8 107859479 107866340 + MGP_LPJ_P0089999 Plekhg4 protein_coding protein_coding MGP_LPJ_T0090000.1 MGP_LPJ_G0033948.1 mouse_genomes_project 8 107859479 107866961 + MGP_LPJ_P0090000 Plekhg4 protein_coding protein_coding MGP_LPJ_T0090001.1 MGP_LPJ_G0033948.1 mouse_genomes_project 8 107864592 107866954 + Plekhg4 protein_coding retained_intron MGP_LPJ_T0089545.1 MGP_LPJ_G0033793.1 mouse_genomes_project 8 86054880 86061894 - MGP_LPJ_P0089545 Best2 protein_coding protein_coding MGP_LPJ_T0089497.1 MGP_LPJ_G0033783.1 mouse_genomes_project 8 85904236 85922103 + MGP_LPJ_P0089497 Syce2 protein_coding protein_coding MGP_LPJ_T0089498.1 MGP_LPJ_G0033783.1 mouse_genomes_project 8 85904236 85922868 + MGP_LPJ_P0089498 Syce2 protein_coding protein_coding MGP_LPJ_T0089499.1 MGP_LPJ_G0033783.1 mouse_genomes_project 8 85904315 85922113 + MGP_LPJ_P0089499 Syce2 protein_coding nonsense_mediated_decay MGP_LPJ_T0089500.1 MGP_LPJ_G0033783.1 mouse_genomes_project 8 85904560 85920638 + Syce2 protein_coding retained_intron MGP_LPJ_T0010984.1 MGP_LPJ_G0009102.1 mouse_genomes_project 8 39136321 39136376 - Mir7666 miRNA miRNA MGP_LPJ_T0087781.1 MGP_LPJ_G0033241.1 mouse_genomes_project 8 1068474 1088803 + protein_coding retained_intron MGP_LPJ_T0087782.1 MGP_LPJ_G0033241.1 mouse_genomes_project 8 1068474 1109904 + MGP_LPJ_P0087782 protein_coding protein_coding MGP_LPJ_T0087783.1 MGP_LPJ_G0033241.1 mouse_genomes_project 8 1068474 1095554 + MGP_LPJ_P0087783 protein_coding protein_coding MGP_LPJ_T0087784.1 MGP_LPJ_G0033241.1 mouse_genomes_project 8 1068481 1110079 + MGP_LPJ_P0087784 protein_coding protein_coding MGP_LPJ_T0087785.1 MGP_LPJ_G0033241.1 mouse_genomes_project 8 1068494 1109899 + MGP_LPJ_P0087785 protein_coding nonsense_mediated_decay MGP_LPJ_T0087786.1 MGP_LPJ_G0033241.1 mouse_genomes_project 8 1068508 1103581 + protein_coding retained_intron MGP_LPJ_T0087787.1 MGP_LPJ_G0033241.1 mouse_genomes_project 8 1068646 1109899 + MGP_LPJ_P0087787 protein_coding protein_coding MGP_LPJ_T0087788.1 MGP_LPJ_G0033241.1 mouse_genomes_project 8 1089110 1089952 + protein_coding retained_intron MGP_LPJ_T0087789.1 MGP_LPJ_G0033241.1 mouse_genomes_project 8 1093144 1104932 + protein_coding processed_transcript MGP_LPJ_T0087790.1 MGP_LPJ_G0033241.1 mouse_genomes_project 8 1102652 1107578 + protein_coding retained_intron MGP_LPJ_T0087791.1 MGP_LPJ_G0033241.1 mouse_genomes_project 8 1105227 1109895 + protein_coding retained_intron MGP_LPJ_T0087792.1 MGP_LPJ_G0033241.1 mouse_genomes_project 8 1105471 1108193 + protein_coding retained_intron MGP_LPJ_T0087793.1 MGP_LPJ_G0033241.1 mouse_genomes_project 8 1107581 1108456 + protein_coding retained_intron MGP_LPJ_T0087794.1 MGP_LPJ_G0033241.1 mouse_genomes_project 8 1108101 1113110 + MGP_LPJ_P0087794 protein_coding protein_coding MGP_LPJ_T0088873.1 MGP_LPJ_G0033596.1 mouse_genomes_project 8 70372192 70379494 + MGP_LPJ_P0088873 Hapln4 protein_coding protein_coding MGP_LPJ_T0089901.1 MGP_LPJ_G0033908.1 mouse_genomes_project 8 106547687 106567904 + MGP_LPJ_P0089901 Cklf protein_coding protein_coding MGP_LPJ_T0089902.1 MGP_LPJ_G0033908.1 mouse_genomes_project 8 106547716 106569163 + MGP_LPJ_P0089902 Cklf protein_coding protein_coding MGP_LPJ_T0087973.1 MGP_LPJ_G0033295.1 mouse_genomes_project 8 10703642 10731013 + MGP_LPJ_P0087973 Tmem255b protein_coding protein_coding MGP_LPJ_T0087974.1 MGP_LPJ_G0033295.1 mouse_genomes_project 8 10703642 10731013 + MGP_LPJ_P0087974 Tmem255b protein_coding protein_coding MGP_LPJ_T0015940.1 MGP_LPJ_G0014031.1 mouse_genomes_project 8 75859660 75860501 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011045.1 MGP_LPJ_G0009163.1 mouse_genomes_project 8 125622309 125622372 + Mir7237 miRNA miRNA MGP_LPJ_T0089095.1 MGP_LPJ_G0033656.1 mouse_genomes_project 8 71848978 71859908 - MGP_LPJ_P0089095 Ano8 protein_coding protein_coding MGP_LPJ_T0089096.1 MGP_LPJ_G0033656.1 mouse_genomes_project 8 71849341 71859825 - MGP_LPJ_P0089096 Ano8 protein_coding unknown_likely_coding MGP_LPJ_T0090395.1 MGP_LPJ_G0034092.1 mouse_genomes_project 8 123103041 123114516 - MGP_LPJ_P0090395 Kcng4 protein_coding protein_coding MGP_LPJ_T0090396.1 MGP_LPJ_G0034092.1 mouse_genomes_project 8 123103041 123114850 - MGP_LPJ_P0090396 Kcng4 protein_coding protein_coding MGP_LPJ_T0005347.1 MGP_LPJ_G0004535.1 mouse_genomes_project 8 601089 602238 - antisense antisense MGP_LPJ_T0090077.1 MGP_LPJ_G0033981.1 mouse_genomes_project 8 108685563 108692219 - MGP_LPJ_P0090077 Esrp2 protein_coding protein_coding MGP_LPJ_T0090078.1 MGP_LPJ_G0033981.1 mouse_genomes_project 8 108687469 108692058 - MGP_LPJ_P0090078 Esrp2 protein_coding protein_coding MGP_LPJ_T0090079.1 MGP_LPJ_G0033981.1 mouse_genomes_project 8 108687972 108688320 - Esrp2 protein_coding processed_transcript MGP_LPJ_T0090080.1 MGP_LPJ_G0033981.1 mouse_genomes_project 8 108688059 108689969 - Esrp2 protein_coding retained_intron MGP_LPJ_T0090081.1 MGP_LPJ_G0033981.1 mouse_genomes_project 8 108688512 108689373 - Esrp2 protein_coding retained_intron MGP_LPJ_T0090082.1 MGP_LPJ_G0033981.1 mouse_genomes_project 8 108688772 108689373 - Esrp2 protein_coding retained_intron MGP_LPJ_T0090083.1 MGP_LPJ_G0033981.1 mouse_genomes_project 8 108689046 108690341 - Esrp2 protein_coding retained_intron MGP_LPJ_T0090084.1 MGP_LPJ_G0033981.1 mouse_genomes_project 8 108689203 108690186 - Esrp2 protein_coding retained_intron MGP_LPJ_T0090085.1 MGP_LPJ_G0033981.1 mouse_genomes_project 8 108691427 108691930 - Esrp2 protein_coding retained_intron MGP_LPJ_T0090032.1 MGP_LPJ_G0033960.1 mouse_genomes_project 8 108211126 108213466 + MGP_LPJ_P0090032 Pard6a protein_coding protein_coding MGP_LPJ_T0090033.1 MGP_LPJ_G0033960.1 mouse_genomes_project 8 108211619 108213465 + MGP_LPJ_P0090033 Pard6a protein_coding protein_coding MGP_LPJ_T0015920.1 MGP_LPJ_G0014011.1 mouse_genomes_project 8 32810368 32812931 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018440.1 MGP_LPJ_G0015642.1 mouse_genomes_project 8 108690644 108693345 + 1810019D21Rik processed_transcript processed_transcript MGP_LPJ_T0018441.1 MGP_LPJ_G0015642.1 mouse_genomes_project 8 108690679 108693136 + 1810019D21Rik processed_transcript processed_transcript MGP_LPJ_T0018442.1 MGP_LPJ_G0015642.1 mouse_genomes_project 8 108692309 108693770 + 1810019D21Rik processed_transcript processed_transcript MGP_LPJ_T0089337.1 MGP_LPJ_G0033738.1 mouse_genomes_project 8 84329664 84368403 + MGP_LPJ_P0089337 Clgn protein_coding protein_coding MGP_LPJ_T0089338.1 MGP_LPJ_G0033738.1 mouse_genomes_project 8 84329675 84366682 + MGP_LPJ_P0089338 Clgn protein_coding protein_coding MGP_LPJ_T0090335.1 MGP_LPJ_G0034067.1 mouse_genomes_project 8 119797913 119975541 - MGP_LPJ_P0090335 Cdyl2 protein_coding protein_coding MGP_LPJ_T0088318.1 MGP_LPJ_G0033425.1 mouse_genomes_project 8 29520737 29597298 + MGP_LPJ_P0088318 Fut10 protein_coding protein_coding MGP_LPJ_T0088319.1 MGP_LPJ_G0033425.1 mouse_genomes_project 8 29520786 29574463 + MGP_LPJ_P0088319 Fut10 protein_coding protein_coding MGP_LPJ_T0088320.1 MGP_LPJ_G0033425.1 mouse_genomes_project 8 29535482 29572696 + Fut10 protein_coding processed_transcript MGP_LPJ_T0098066.1 MGP_LPJ_G0036347.1 mouse_genomes_project 8 121154718 121155891 + pseudogene pseudogene MGP_LPJ_T0087763.1 MGP_LPJ_G0033230.1 mouse_genomes_project 8 595617 598247 + MGP_LPJ_P0087763 Mcemp1 protein_coding protein_coding MGP_LPJ_T0005355.1 MGP_LPJ_G0004542.1 mouse_genomes_project 8 10109236 10115187 - Gm15353 antisense antisense MGP_LPJ_T0005356.1 MGP_LPJ_G0004542.1 mouse_genomes_project 8 10109380 10115177 - Gm15353 antisense antisense MGP_LPJ_T0090582.1 MGP_LPJ_G0034138.1 mouse_genomes_project 8 126305829 126309094 - MGP_LPJ_P0090582 Pabpn1l protein_coding protein_coding MGP_LPJ_T0099781.1 MGP_LPJ_G0038044.1 mouse_genomes_project 8 93437771 93437875 + Gm24254 snRNA snRNA MGP_LPJ_T0015898.1 MGP_LPJ_G0013989.1 mouse_genomes_project 8 7899021 7899462 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009110.1 MGP_LPJ_G0007325.1 mouse_genomes_project 8 34151049 34157266 - Gm16793 lincRNA lincRNA MGP_LPJ_T0101065.1 MGP_LPJ_G0039328.1 mouse_genomes_project 8 125326223 125326302 - Gm23299 snoRNA snoRNA MGP_LPJ_T0087800.1 MGP_LPJ_G0033244.1 mouse_genomes_project 8 1144283 1153420 + MGP_LPJ_P0087800 Map2k7 protein_coding protein_coding MGP_LPJ_T0087801.1 MGP_LPJ_G0033244.1 mouse_genomes_project 8 1144351 1153420 + MGP_LPJ_P0087801 Map2k7 protein_coding protein_coding MGP_LPJ_T0087802.1 MGP_LPJ_G0033244.1 mouse_genomes_project 8 1144351 1153420 + MGP_LPJ_P0087802 Map2k7 protein_coding protein_coding MGP_LPJ_T0087803.1 MGP_LPJ_G0033244.1 mouse_genomes_project 8 1144387 1156946 + MGP_LPJ_P0087803 Map2k7 protein_coding nonsense_mediated_decay MGP_LPJ_T0087804.1 MGP_LPJ_G0033244.1 mouse_genomes_project 8 1144432 1153422 + MGP_LPJ_P0087804 Map2k7 protein_coding protein_coding MGP_LPJ_T0087805.1 MGP_LPJ_G0033244.1 mouse_genomes_project 8 1145627 1153420 + MGP_LPJ_P0087805 Map2k7 protein_coding protein_coding MGP_LPJ_T0087806.1 MGP_LPJ_G0033244.1 mouse_genomes_project 8 1148786 1151364 + MGP_LPJ_P0087806 Map2k7 protein_coding protein_coding MGP_LPJ_T0087807.1 MGP_LPJ_G0033244.1 mouse_genomes_project 8 1149979 1151700 + Map2k7 protein_coding processed_transcript MGP_LPJ_T0087808.1 MGP_LPJ_G0033244.1 mouse_genomes_project 8 1150159 1151823 + Map2k7 protein_coding retained_intron MGP_LPJ_T0005370.1 MGP_LPJ_G0004552.1 mouse_genomes_project 8 24154816 24175988 + 1700047A11Rik antisense antisense MGP_LPJ_T0005371.1 MGP_LPJ_G0004552.1 mouse_genomes_project 8 24154823 24161518 + 1700047A11Rik antisense antisense MGP_LPJ_T0089864.1 MGP_LPJ_G0033897.1 mouse_genomes_project 8 97262592 97275974 + MGP_LPJ_P0089864 Gins3 protein_coding protein_coding MGP_LPJ_T0089681.1 MGP_LPJ_G0033835.1 mouse_genomes_project 8 92232021 92232498 - MGP_LPJ_P0089681 protein_coding protein_coding MGP_LPJ_T0099794.1 MGP_LPJ_G0038057.1 mouse_genomes_project 8 121814678 121814785 - Gm24035 snRNA snRNA MGP_LPJ_T0088742.1 MGP_LPJ_G0033556.1 mouse_genomes_project 8 65071319 65076901 - MGP_LPJ_P0088742 protein_coding protein_coding MGP_LPJ_T0088743.1 MGP_LPJ_G0033556.1 mouse_genomes_project 8 65073260 65096655 - protein_coding processed_transcript MGP_LPJ_T0088744.1 MGP_LPJ_G0033556.1 mouse_genomes_project 8 65086171 65096731 - MGP_LPJ_P0088744 protein_coding protein_coding MGP_LPJ_T0088745.1 MGP_LPJ_G0033556.1 mouse_genomes_project 8 65086171 65096888 - MGP_LPJ_P0088745 protein_coding protein_coding MGP_LPJ_T0088090.1 MGP_LPJ_G0033346.1 mouse_genomes_project 8 19770396 19773308 - MGP_LPJ_P0088090 Defb15 protein_coding protein_coding MGP_LPJ_T0089618.1 MGP_LPJ_G0033815.1 mouse_genomes_project 8 87723108 87817577 + MGP_LPJ_P0089618 Lonp2 protein_coding protein_coding MGP_LPJ_T0089619.1 MGP_LPJ_G0033815.1 mouse_genomes_project 8 87723108 87824830 + MGP_LPJ_P0089619 Lonp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0089620.1 MGP_LPJ_G0033815.1 mouse_genomes_project 8 87723152 87740751 + Lonp2 protein_coding processed_transcript MGP_LPJ_T0089621.1 MGP_LPJ_G0033815.1 mouse_genomes_project 8 87723170 87817577 + MGP_LPJ_P0089621 Lonp2 protein_coding protein_coding MGP_LPJ_T0089622.1 MGP_LPJ_G0033815.1 mouse_genomes_project 8 87730481 87771845 + Lonp2 protein_coding processed_transcript MGP_LPJ_T0089623.1 MGP_LPJ_G0033815.1 mouse_genomes_project 8 87750653 87817578 + MGP_LPJ_P0089623 Lonp2 protein_coding protein_coding MGP_LPJ_T0089624.1 MGP_LPJ_G0033815.1 mouse_genomes_project 8 87750653 87817578 + MGP_LPJ_P0089624 Lonp2 protein_coding protein_coding MGP_LPJ_T0088467.1 MGP_LPJ_G0033473.1 mouse_genomes_project 8 42126707 42139077 - MGP_LPJ_P0088467 Triml1 protein_coding protein_coding MGP_LPJ_T0090388.1 MGP_LPJ_G0034089.1 mouse_genomes_project 8 123048298 123077659 + MGP_LPJ_P0090388 Dnaaf1 protein_coding protein_coding MGP_LPJ_T0088165.1 MGP_LPJ_G0033376.1 mouse_genomes_project 8 21560958 21847047 + MGP_LPJ_P0088165 Zmat4 protein_coding protein_coding MGP_LPJ_T0088166.1 MGP_LPJ_G0033376.1 mouse_genomes_project 8 21597699 22018689 + MGP_LPJ_P0088166 Zmat4 protein_coding protein_coding MGP_LPJ_T0088167.1 MGP_LPJ_G0033376.1 mouse_genomes_project 8 21597699 22115304 + MGP_LPJ_P0088167 Zmat4 protein_coding nonsense_mediated_decay MGP_LPJ_T0088168.1 MGP_LPJ_G0033376.1 mouse_genomes_project 8 21629234 21737097 + MGP_LPJ_P0088168 Zmat4 protein_coding protein_coding MGP_LPJ_T0088169.1 MGP_LPJ_G0033376.1 mouse_genomes_project 8 21878042 21966935 + Zmat4 protein_coding retained_intron MGP_LPJ_T0101068.1 MGP_LPJ_G0039331.1 mouse_genomes_project 8 132904919 132905046 + Gm26100 snoRNA snoRNA MGP_LPJ_T0090193.1 MGP_LPJ_G0034023.1 mouse_genomes_project 8 112892329 112917288 - MGP_LPJ_P0090193 Gm17720 protein_coding protein_coding MGP_LPJ_T0089903.1 MGP_LPJ_G0033909.1 mouse_genomes_project 8 106588624 106606355 - MGP_LPJ_P0089903 Cmtm2a protein_coding protein_coding MGP_LPJ_T0018439.1 MGP_LPJ_G0015641.1 mouse_genomes_project 8 101199689 101311914 - Gm15680 processed_transcript processed_transcript MGP_LPJ_T0099754.1 MGP_LPJ_G0038017.1 mouse_genomes_project 8 22927143 22927246 + Gm23898 snRNA snRNA MGP_LPJ_T0089323.1 MGP_LPJ_G0033732.1 mouse_genomes_project 8 83783685 84008406 + MGP_LPJ_P0089323 Rnf150 protein_coding protein_coding MGP_LPJ_T0088950.1 MGP_LPJ_G0033612.1 mouse_genomes_project 8 70675570 70734767 - Crtc1 protein_coding retained_intron MGP_LPJ_T0088951.1 MGP_LPJ_G0033612.1 mouse_genomes_project 8 70675570 70734767 - MGP_LPJ_P0088951 Crtc1 protein_coding protein_coding MGP_LPJ_T0088952.1 MGP_LPJ_G0033612.1 mouse_genomes_project 8 70690937 70696008 - Crtc1 protein_coding retained_intron MGP_LPJ_T0088953.1 MGP_LPJ_G0033612.1 mouse_genomes_project 8 70698048 70734763 - Crtc1 protein_coding retained_intron MGP_LPJ_T0088954.1 MGP_LPJ_G0033612.1 mouse_genomes_project 8 70699325 70726560 - Crtc1 protein_coding processed_transcript MGP_LPJ_T0009167.1 MGP_LPJ_G0007370.1 mouse_genomes_project 8 93301445 93306941 - Gm28515 lincRNA lincRNA MGP_LPJ_T0088380.1 MGP_LPJ_G0033449.1 mouse_genomes_project 8 34348650 34405288 + MGP_LPJ_P0088380 unknown_likely_coding unknown_likely_coding MGP_LPJ_T0087814.1 MGP_LPJ_G0033248.1 mouse_genomes_project 8 1165251 1181474 - Timm44 protein_coding retained_intron MGP_LPJ_T0087815.1 MGP_LPJ_G0033248.1 mouse_genomes_project 8 1165251 1181502 - MGP_LPJ_P0087815 Timm44 protein_coding protein_coding MGP_LPJ_T0087816.1 MGP_LPJ_G0033248.1 mouse_genomes_project 8 1165269 1181460 - MGP_LPJ_P0087816 Timm44 protein_coding nonsense_mediated_decay MGP_LPJ_T0087817.1 MGP_LPJ_G0033248.1 mouse_genomes_project 8 1165504 1166256 - Timm44 protein_coding retained_intron MGP_LPJ_T0087818.1 MGP_LPJ_G0033248.1 mouse_genomes_project 8 1165620 1172537 - Timm44 protein_coding retained_intron MGP_LPJ_T0087819.1 MGP_LPJ_G0033248.1 mouse_genomes_project 8 1171604 1172474 - Timm44 protein_coding retained_intron MGP_LPJ_T0087820.1 MGP_LPJ_G0033248.1 mouse_genomes_project 8 1171785 1173154 - Timm44 protein_coding retained_intron MGP_LPJ_T0087821.1 MGP_LPJ_G0033248.1 mouse_genomes_project 8 1172835 1181471 - Timm44 protein_coding processed_transcript MGP_LPJ_T0087822.1 MGP_LPJ_G0033248.1 mouse_genomes_project 8 1172893 1181462 - Timm44 protein_coding retained_intron MGP_LPJ_T0088323.1 MGP_LPJ_G0033428.1 mouse_genomes_project 8 30323617 30384886 - MGP_LPJ_P0088323 unknown_likely_coding unknown_likely_coding MGP_LPJ_T0101056.1 MGP_LPJ_G0039319.1 mouse_genomes_project 8 108533171 108533302 - Gm22972 snoRNA snoRNA MGP_LPJ_T0090100.1 MGP_LPJ_G0033990.1 mouse_genomes_project 8 109165149 109234658 + MGP_LPJ_P0090100 Cdh1 protein_coding protein_coding MGP_LPJ_T0090101.1 MGP_LPJ_G0033990.1 mouse_genomes_project 8 109165177 109233774 + MGP_LPJ_P0090101 Cdh1 protein_coding protein_coding MGP_LPJ_T0090102.1 MGP_LPJ_G0033990.1 mouse_genomes_project 8 109165941 109216920 + Cdh1 protein_coding processed_transcript MGP_LPJ_T0018443.1 MGP_LPJ_G0015643.1 mouse_genomes_project 8 112719975 112728238 + Gm16349 processed_transcript processed_transcript MGP_LPJ_T0088864.1 MGP_LPJ_G0033593.1 mouse_genomes_project 8 70303296 70332088 - MGP_LPJ_P0088864 Mau2 protein_coding protein_coding MGP_LPJ_T0088865.1 MGP_LPJ_G0033593.1 mouse_genomes_project 8 70303296 70332137 - MGP_LPJ_P0088865 Mau2 protein_coding protein_coding MGP_LPJ_T0090161.1 MGP_LPJ_G0034011.1 mouse_genomes_project 8 112343086 112351234 + MGP_LPJ_P0090161 Txnl4b protein_coding protein_coding MGP_LPJ_T0090162.1 MGP_LPJ_G0034011.1 mouse_genomes_project 8 112346070 112350706 + MGP_LPJ_P0090162 Txnl4b protein_coding protein_coding MGP_LPJ_T0090737.1 MGP_LPJ_G0034184.1 mouse_genomes_project 8 128774409 128781095 + MGP_LPJ_P0090737 Sprtn protein_coding protein_coding MGP_LPJ_T0098678.1 MGP_LPJ_G0036947.1 mouse_genomes_project 8 87073237 87075638 + Hm629797 sense_intronic sense_intronic MGP_LPJ_T0011039.1 MGP_LPJ_G0009157.1 mouse_genomes_project 8 120766118 120766175 + Mir7077 miRNA miRNA MGP_LPJ_T0089231.1 MGP_LPJ_G0033702.1 mouse_genomes_project 8 75678795 75686567 + MGP_LPJ_P0089231 Hmox1 protein_coding protein_coding MGP_LPJ_T0089232.1 MGP_LPJ_G0033702.1 mouse_genomes_project 8 75678845 75682422 + Hmox1 protein_coding retained_intron MGP_LPJ_T0089233.1 MGP_LPJ_G0033702.1 mouse_genomes_project 8 75679054 75683175 + MGP_LPJ_P0089233 Hmox1 protein_coding protein_coding MGP_LPJ_T0089501.1 MGP_LPJ_G0033784.1 mouse_genomes_project 8 85921032 85929107 - MGP_LPJ_P0089501 Gcdh protein_coding protein_coding MGP_LPJ_T0089502.1 MGP_LPJ_G0033784.1 mouse_genomes_project 8 85926159 85928711 - Gcdh protein_coding retained_intron MGP_LPJ_T0089503.1 MGP_LPJ_G0033784.1 mouse_genomes_project 8 85926358 85928093 - Gcdh protein_coding retained_intron MGP_LPJ_T0089504.1 MGP_LPJ_G0033784.1 mouse_genomes_project 8 85928077 85928901 - Gcdh protein_coding retained_intron MGP_LPJ_T0089505.1 MGP_LPJ_G0033784.1 mouse_genomes_project 8 85928520 85929347 - MGP_LPJ_P0089505 Gcdh protein_coding protein_coding MGP_LPJ_T0088334.1 MGP_LPJ_G0033434.1 mouse_genomes_project 8 32031583 32055991 - MGP_LPJ_P0088334 Ubxn8 protein_coding protein_coding MGP_LPJ_T0011049.1 MGP_LPJ_G0009167.1 mouse_genomes_project 8 127836784 127836866 + Mir1967 miRNA miRNA MGP_LPJ_T0089983.1 MGP_LPJ_G0033942.1 mouse_genomes_project 8 107773801 107781460 + MGP_LPJ_P0089983 E2f4 protein_coding protein_coding MGP_LPJ_T0089298.1 MGP_LPJ_G0033726.1 mouse_genomes_project 8 81510637 81558507 - MGP_LPJ_P0089298 Smarca5 protein_coding protein_coding MGP_LPJ_T0089299.1 MGP_LPJ_G0033726.1 mouse_genomes_project 8 81512073 81557143 - MGP_LPJ_P0089299 Smarca5 protein_coding unknown_likely_coding MGP_LPJ_T0089300.1 MGP_LPJ_G0033726.1 mouse_genomes_project 8 81512073 81557143 - MGP_LPJ_P0089300 Smarca5 protein_coding unknown_likely_coding MGP_LPJ_T0089301.1 MGP_LPJ_G0033726.1 mouse_genomes_project 8 81518531 81558507 - Smarca5 protein_coding processed_transcript MGP_LPJ_T0089302.1 MGP_LPJ_G0033726.1 mouse_genomes_project 8 81522456 81524729 - Smarca5 protein_coding retained_intron MGP_LPJ_T0089303.1 MGP_LPJ_G0033726.1 mouse_genomes_project 8 81522768 81523892 - Smarca5 protein_coding retained_intron MGP_LPJ_T0089304.1 MGP_LPJ_G0033726.1 mouse_genomes_project 8 81530568 81532187 - Smarca5 protein_coding retained_intron MGP_LPJ_T0089305.1 MGP_LPJ_G0033726.1 mouse_genomes_project 8 81541540 81542351 - Smarca5 protein_coding retained_intron MGP_LPJ_T0090461.1 MGP_LPJ_G0034109.1 mouse_genomes_project 8 124308759 124330546 + MGP_LPJ_P0090461 Irf8 protein_coding protein_coding MGP_LPJ_T0090462.1 MGP_LPJ_G0034109.1 mouse_genomes_project 8 124308760 124315621 + Irf8 protein_coding retained_intron MGP_LPJ_T0090463.1 MGP_LPJ_G0034109.1 mouse_genomes_project 8 124308786 124327330 + MGP_LPJ_P0090463 Irf8 protein_coding protein_coding MGP_LPJ_T0090464.1 MGP_LPJ_G0034109.1 mouse_genomes_project 8 124311040 124329433 + MGP_LPJ_P0090464 Irf8 protein_coding protein_coding MGP_LPJ_T0090466.1 MGP_LPJ_G0034109.1 mouse_genomes_project 8 124319331 124327585 + Irf8 protein_coding retained_intron MGP_LPJ_T0090467.1 MGP_LPJ_G0034109.1 mouse_genomes_project 8 124326060 124327563 + Irf8 protein_coding processed_transcript MGP_LPJ_T0088858.1 MGP_LPJ_G0033590.1 mouse_genomes_project 8 70173610 70181791 - MGP_LPJ_P0088858 Ndufa13 protein_coding protein_coding MGP_LPJ_T0089855.1 MGP_LPJ_G0033891.1 mouse_genomes_project 8 96945198 96958781 + Usb1 protein_coding retained_intron MGP_LPJ_T0089856.1 MGP_LPJ_G0033891.1 mouse_genomes_project 8 96945235 96962016 + MGP_LPJ_P0089856 Usb1 protein_coding protein_coding MGP_LPJ_T0089857.1 MGP_LPJ_G0033891.1 mouse_genomes_project 8 96959653 96961333 + Usb1 protein_coding retained_intron MGP_LPJ_T0088301.1 MGP_LPJ_G0033417.1 mouse_genomes_project 8 25534435 25565130 + MGP_LPJ_P0088301 Chrnb3 protein_coding protein_coding MGP_LPJ_T0088302.1 MGP_LPJ_G0033417.1 mouse_genomes_project 8 25534435 25565130 + MGP_LPJ_P0088302 Chrnb3 protein_coding protein_coding MGP_LPJ_T0088303.1 MGP_LPJ_G0033417.1 mouse_genomes_project 8 25534645 25562202 + MGP_LPJ_P0088303 Chrnb3 protein_coding unknown_likely_coding MGP_LPJ_T0088086.1 MGP_LPJ_G0033342.1 mouse_genomes_project 8 19643350 19646955 + MGP_LPJ_P0088086 Defb2 protein_coding protein_coding MGP_LPJ_T0090750.1 MGP_LPJ_G0034189.1 mouse_genomes_project 8 129596356 129599898 + MGP_LPJ_P0090750 Map10 protein_coding protein_coding MGP_LPJ_T0088262.1 MGP_LPJ_G0033400.1 mouse_genomes_project 8 23898120 23988863 + MGP_LPJ_P0088262 Kcnu1 protein_coding protein_coding MGP_LPJ_T0088263.1 MGP_LPJ_G0033400.1 mouse_genomes_project 8 23961855 23988864 + MGP_LPJ_P0088263 Kcnu1 protein_coding protein_coding MGP_LPJ_T0088264.1 MGP_LPJ_G0033400.1 mouse_genomes_project 8 23961867 23972303 + MGP_LPJ_P0088264 Kcnu1 protein_coding protein_coding MGP_LPJ_T0090027.1 MGP_LPJ_G0033958.1 mouse_genomes_project 8 108196278 108203652 + MGP_LPJ_P0090027 Rltpr protein_coding unknown_likely_coding MGP_LPJ_T0090028.1 MGP_LPJ_G0033958.1 mouse_genomes_project 8 108196278 108203652 + MGP_LPJ_P0090028 Rltpr protein_coding unknown_likely_coding MGP_LPJ_T0090029.1 MGP_LPJ_G0033958.1 mouse_genomes_project 8 108200910 108208183 + MGP_LPJ_P0090029 Rltpr protein_coding protein_coding MGP_LPJ_T0090030.1 MGP_LPJ_G0033958.1 mouse_genomes_project 8 108204152 108208208 + MGP_LPJ_P0090030 Rltpr protein_coding unknown_likely_coding MGP_LPJ_T0088594.1 MGP_LPJ_G0033507.1 mouse_genomes_project 8 46852178 46853841 + MGP_LPJ_P0088594 protein_coding protein_coding MGP_LPJ_T0089229.1 MGP_LPJ_G0033701.1 mouse_genomes_project 8 75610410 75651173 + MGP_LPJ_P0089229 Tom1 protein_coding protein_coding MGP_LPJ_T0089230.1 MGP_LPJ_G0033701.1 mouse_genomes_project 8 75610410 75651173 + MGP_LPJ_P0089230 Tom1 protein_coding protein_coding MGP_LPJ_T0090612.1 MGP_LPJ_G0034145.1 mouse_genomes_project 8 126845980 126866392 + Cpne7 protein_coding retained_intron MGP_LPJ_T0090613.1 MGP_LPJ_G0034145.1 mouse_genomes_project 8 126845984 126866394 + MGP_LPJ_P0090613 Cpne7 protein_coding protein_coding MGP_LPJ_T0090614.1 MGP_LPJ_G0034145.1 mouse_genomes_project 8 126846053 126866394 + Cpne7 protein_coding retained_intron MGP_LPJ_T0090615.1 MGP_LPJ_G0034145.1 mouse_genomes_project 8 126856486 126857343 + Cpne7 protein_coding processed_transcript MGP_LPJ_T0090616.1 MGP_LPJ_G0034145.1 mouse_genomes_project 8 126858587 126861848 + Cpne7 protein_coding retained_intron MGP_LPJ_T0089345.1 MGP_LPJ_G0033742.1 mouse_genomes_project 8 84556101 84559855 + MGP_LPJ_P0089345 Dnajb1 protein_coding protein_coding MGP_LPJ_T0018397.1 MGP_LPJ_G0015624.1 mouse_genomes_project 8 9893058 9894530 + 4931415C17Rik processed_transcript processed_transcript MGP_LPJ_T0018398.1 MGP_LPJ_G0015624.1 mouse_genomes_project 8 9893302 9901188 + 4931415C17Rik processed_transcript processed_transcript MGP_LPJ_T0090597.1 MGP_LPJ_G0034143.1 mouse_genomes_project 8 126780215 126799673 + MGP_LPJ_P0090597 Spg7 protein_coding protein_coding MGP_LPJ_T0090598.1 MGP_LPJ_G0034143.1 mouse_genomes_project 8 126782447 126824079 + MGP_LPJ_P0090598 Spg7 protein_coding protein_coding MGP_LPJ_T0090599.1 MGP_LPJ_G0034143.1 mouse_genomes_project 8 126782744 126824072 + MGP_LPJ_P0090599 Spg7 protein_coding protein_coding MGP_LPJ_T0090600.1 MGP_LPJ_G0034143.1 mouse_genomes_project 8 126782776 126824070 + Spg7 protein_coding retained_intron MGP_LPJ_T0090601.1 MGP_LPJ_G0034143.1 mouse_genomes_project 8 126782795 126824082 + MGP_LPJ_P0090601 Spg7 protein_coding protein_coding MGP_LPJ_T0090602.1 MGP_LPJ_G0034143.1 mouse_genomes_project 8 126792342 126808588 + MGP_LPJ_P0090602 Spg7 protein_coding nonsense_mediated_decay MGP_LPJ_T0090603.1 MGP_LPJ_G0034143.1 mouse_genomes_project 8 126800094 126808614 + Spg7 protein_coding retained_intron MGP_LPJ_T0090604.1 MGP_LPJ_G0034143.1 mouse_genomes_project 8 126800466 126824072 + MGP_LPJ_P0090604 Spg7 protein_coding protein_coding MGP_LPJ_T0090605.1 MGP_LPJ_G0034143.1 mouse_genomes_project 8 126806854 126818770 + Spg7 protein_coding retained_intron MGP_LPJ_T0090606.1 MGP_LPJ_G0034143.1 mouse_genomes_project 8 126807024 126811355 + Spg7 protein_coding processed_transcript MGP_LPJ_T0090607.1 MGP_LPJ_G0034143.1 mouse_genomes_project 8 126811314 126824072 + MGP_LPJ_P0090607 Spg7 protein_coding protein_coding MGP_LPJ_T0088322.1 MGP_LPJ_G0033427.1 mouse_genomes_project 8 30184718 30293455 - MGP_LPJ_P0088322 Nrg1 protein_coding protein_coding MGP_LPJ_T0009107.1 MGP_LPJ_G0007322.1 mouse_genomes_project 8 32549019 32551531 + Gm26768 lincRNA lincRNA MGP_LPJ_T0087937.1 MGP_LPJ_G0033282.1 mouse_genomes_project 8 10261581 10271450 + MGP_LPJ_P0087937 F7 protein_coding protein_coding MGP_LPJ_T0088671.1 MGP_LPJ_G0033538.1 mouse_genomes_project 8 60481345 60523082 + MGP_LPJ_P0088671 Mfap3l protein_coding protein_coding MGP_LPJ_T0088672.1 MGP_LPJ_G0033538.1 mouse_genomes_project 8 60481378 60524878 + MGP_LPJ_P0088672 Mfap3l protein_coding protein_coding MGP_LPJ_T0088673.1 MGP_LPJ_G0033538.1 mouse_genomes_project 8 60503286 60520614 + MGP_LPJ_P0088673 Mfap3l protein_coding protein_coding MGP_LPJ_T0088674.1 MGP_LPJ_G0033538.1 mouse_genomes_project 8 60503722 60520510 + MGP_LPJ_P0088674 Mfap3l protein_coding protein_coding MGP_LPJ_T0088292.1 MGP_LPJ_G0033411.1 mouse_genomes_project 8 25263582 25268383 - MGP_LPJ_P0088292 Brf2 protein_coding protein_coding MGP_LPJ_T0088041.1 MGP_LPJ_G0033316.1 mouse_genomes_project 8 13267507 14962819 - MGP_LPJ_P0088041 Csmd1 protein_coding protein_coding MGP_LPJ_T0088042.1 MGP_LPJ_G0033316.1 mouse_genomes_project 8 13267515 13360221 - Csmd1 protein_coding retained_intron MGP_LPJ_T0088043.1 MGP_LPJ_G0033316.1 mouse_genomes_project 8 13454793 14962819 - Csmd1 protein_coding processed_transcript MGP_LPJ_T0088044.1 MGP_LPJ_G0033316.1 mouse_genomes_project 8 13661451 14962819 - Csmd1 protein_coding retained_intron MGP_LPJ_T0088045.1 MGP_LPJ_G0033316.1 mouse_genomes_project 8 13726613 14963124 - Csmd1 protein_coding processed_transcript MGP_LPJ_T0088046.1 MGP_LPJ_G0033316.1 mouse_genomes_project 8 14634478 14962923 - Csmd1 protein_coding retained_intron MGP_LPJ_T0088047.1 MGP_LPJ_G0033316.1 mouse_genomes_project 8 14793686 14962915 - Csmd1 protein_coding processed_transcript MGP_LPJ_T0088546.1 MGP_LPJ_G0033493.1 mouse_genomes_project 8 45260731 45295431 + MGP_LPJ_P0088546 Cfap97 protein_coding protein_coding MGP_LPJ_T0088547.1 MGP_LPJ_G0033493.1 mouse_genomes_project 8 45266370 45295429 + MGP_LPJ_P0088547 Cfap97 protein_coding protein_coding MGP_LPJ_T0088842.1 MGP_LPJ_G0033586.1 mouse_genomes_project 8 70099348 70109337 + MGP_LPJ_P0088842 Lpar2 protein_coding protein_coding MGP_LPJ_T0088843.1 MGP_LPJ_G0033586.1 mouse_genomes_project 8 70099484 70109338 + MGP_LPJ_P0088843 Lpar2 protein_coding protein_coding MGP_LPJ_T0089082.1 MGP_LPJ_G0033653.1 mouse_genomes_project 8 71829641 71836605 - MGP_LPJ_P0089082 Abhd8 protein_coding protein_coding MGP_LPJ_T0090310.1 MGP_LPJ_G0034059.1 mouse_genomes_project 8 116730243 116742502 + MGP_LPJ_P0090310 Syce1l protein_coding protein_coding MGP_LPJ_T0090311.1 MGP_LPJ_G0034059.1 mouse_genomes_project 8 116730243 116742502 + MGP_LPJ_P0090311 Syce1l protein_coding protein_coding MGP_LPJ_T0088974.1 MGP_LPJ_G0033618.1 mouse_genomes_project 8 70804923 70821203 - MGP_LPJ_P0088974 Kxd1 protein_coding protein_coding MGP_LPJ_T0088978.1 MGP_LPJ_G0033618.1 mouse_genomes_project 8 70805101 70825803 - MGP_LPJ_P0088978 Kxd1 protein_coding protein_coding MGP_LPJ_T0088979.1 MGP_LPJ_G0033618.1 mouse_genomes_project 8 70811485 70821220 - MGP_LPJ_P0088979 Kxd1 protein_coding protein_coding MGP_LPJ_T0088980.1 MGP_LPJ_G0033618.1 mouse_genomes_project 8 70811693 70821319 - MGP_LPJ_P0088980 Kxd1 protein_coding protein_coding MGP_LPJ_T0088981.1 MGP_LPJ_G0033618.1 mouse_genomes_project 8 70812216 70821220 - MGP_LPJ_P0088981 Kxd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0088982.1 MGP_LPJ_G0033618.1 mouse_genomes_project 8 70812779 70825803 - MGP_LPJ_P0088982 Kxd1 protein_coding protein_coding MGP_LPJ_T0088983.1 MGP_LPJ_G0033618.1 mouse_genomes_project 8 70813485 70821130 - MGP_LPJ_P0088983 Kxd1 protein_coding protein_coding MGP_LPJ_T0088984.1 MGP_LPJ_G0033618.1 mouse_genomes_project 8 70816507 70825630 - MGP_LPJ_P0088984 Kxd1 protein_coding protein_coding MGP_LPJ_T0088985.1 MGP_LPJ_G0033618.1 mouse_genomes_project 8 70817159 70821144 - Kxd1 protein_coding retained_intron MGP_LPJ_T0009100.1 MGP_LPJ_G0007318.1 mouse_genomes_project 8 30384280 30393065 + Gm26578 lincRNA lincRNA MGP_LPJ_T0015956.1 MGP_LPJ_G0014047.1 mouse_genomes_project 8 86939431 86940496 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005416.1 MGP_LPJ_G0004590.1 mouse_genomes_project 8 117453102 117465721 - 4933408N05Rik antisense antisense MGP_LPJ_T0088853.1 MGP_LPJ_G0033588.1 mouse_genomes_project 8 70159817 70167135 - MGP_LPJ_P0088853 Cilp2 protein_coding protein_coding MGP_LPJ_T0089583.1 MGP_LPJ_G0033804.1 mouse_genomes_project 8 86282273 86283212 + MGP_LPJ_P0089583 Olfr371 protein_coding protein_coding MGP_LPJ_T0088469.1 MGP_LPJ_G0033475.1 mouse_genomes_project 8 42298280 42310195 - MGP_LPJ_P0088469 Zfp42 protein_coding protein_coding MGP_LPJ_T0089347.1 MGP_LPJ_G0033744.1 mouse_genomes_project 8 84613587 84618023 + Ptger1 protein_coding retained_intron MGP_LPJ_T0089348.1 MGP_LPJ_G0033744.1 mouse_genomes_project 8 84613617 84619505 + MGP_LPJ_P0089348 Ptger1 protein_coding protein_coding MGP_LPJ_T0002365.1 MGP_LPJ_G0002272.1 mouse_genomes_project 8 123625733 123627258 + TEC TEC MGP_LPJ_T0090104.1 MGP_LPJ_G0033992.1 mouse_genomes_project 8 109449422 109462095 + MGP_LPJ_P0090104 Has3 protein_coding protein_coding MGP_LPJ_T0090105.1 MGP_LPJ_G0033992.1 mouse_genomes_project 8 109450016 109460388 + MGP_LPJ_P0090105 Has3 protein_coding protein_coding MGP_LPJ_T0101062.1 MGP_LPJ_G0039325.1 mouse_genomes_project 8 116616433 116616564 - Gm25766 snoRNA snoRNA MGP_LPJ_T0099780.1 MGP_LPJ_G0038043.1 mouse_genomes_project 8 90859527 90859634 - Gm26331 snRNA snRNA MGP_LPJ_T0018407.1 MGP_LPJ_G0015630.1 mouse_genomes_project 8 44108266 44113524 - AY512931 processed_transcript processed_transcript MGP_LPJ_T0015965.1 MGP_LPJ_G0014056.1 mouse_genomes_project 8 119726518 119729628 + processed_pseudogene processed_pseudogene MGP_LPJ_T0090243.1 MGP_LPJ_G0034038.1 mouse_genomes_project 8 113964238 113988338 - MGP_LPJ_P0090243 Clec18a protein_coding nonsense_mediated_decay MGP_LPJ_T0090244.1 MGP_LPJ_G0034038.1 mouse_genomes_project 8 113964238 113988338 - MGP_LPJ_P0090244 Clec18a protein_coding nonsense_mediated_decay MGP_LPJ_T0090245.1 MGP_LPJ_G0034038.1 mouse_genomes_project 8 113964238 113988338 - MGP_LPJ_P0090245 Clec18a protein_coding nonsense_mediated_decay MGP_LPJ_T0090246.1 MGP_LPJ_G0034038.1 mouse_genomes_project 8 113975634 113988112 - MGP_LPJ_P0090246 Clec18a protein_coding protein_coding MGP_LPJ_T0090247.1 MGP_LPJ_G0034038.1 mouse_genomes_project 8 113975634 113988338 - MGP_LPJ_P0090247 Clec18a protein_coding protein_coding MGP_LPJ_T0090248.1 MGP_LPJ_G0034038.1 mouse_genomes_project 8 113975635 113988338 - MGP_LPJ_P0090248 Clec18a protein_coding nonsense_mediated_decay MGP_LPJ_T0090249.1 MGP_LPJ_G0034038.1 mouse_genomes_project 8 113975635 113998438 - MGP_LPJ_P0090249 Clec18a protein_coding nonsense_mediated_decay MGP_LPJ_T0089826.1 MGP_LPJ_G0033882.1 mouse_genomes_project 8 96515039 96535555 + MGP_LPJ_P0089826 Adgrg5 protein_coding protein_coding MGP_LPJ_T0089827.1 MGP_LPJ_G0033882.1 mouse_genomes_project 8 96515039 96535565 + MGP_LPJ_P0089827 Adgrg5 protein_coding protein_coding MGP_LPJ_T0089828.1 MGP_LPJ_G0033882.1 mouse_genomes_project 8 96515039 96526863 + MGP_LPJ_P0089828 Adgrg5 protein_coding protein_coding MGP_LPJ_T0089829.1 MGP_LPJ_G0033882.1 mouse_genomes_project 8 96515044 96535555 + MGP_LPJ_P0089829 Adgrg5 protein_coding nonsense_mediated_decay MGP_LPJ_T0089830.1 MGP_LPJ_G0033882.1 mouse_genomes_project 8 96526513 96527431 + Adgrg5 protein_coding processed_transcript MGP_LPJ_T0087824.1 MGP_LPJ_G0033250.1 mouse_genomes_project 8 1235344 1280976 + MGP_LPJ_P0087824 Ccl25 protein_coding nonsense_mediated_decay MGP_LPJ_T0087825.1 MGP_LPJ_G0033250.1 mouse_genomes_project 8 1235361 1266561 + MGP_LPJ_P0087825 Ccl25 protein_coding non_stop_decay MGP_LPJ_T0087826.1 MGP_LPJ_G0033250.1 mouse_genomes_project 8 1235364 1266561 + MGP_LPJ_P0087826 Ccl25 protein_coding nonsense_mediated_decay MGP_LPJ_T0087827.1 MGP_LPJ_G0033250.1 mouse_genomes_project 8 1235367 1280632 + MGP_LPJ_P0087827 Ccl25 protein_coding protein_coding MGP_LPJ_T0087828.1 MGP_LPJ_G0033250.1 mouse_genomes_project 8 1235370 1271870 + MGP_LPJ_P0087828 Ccl25 protein_coding protein_coding MGP_LPJ_T0087829.1 MGP_LPJ_G0033250.1 mouse_genomes_project 8 1235375 1243434 + Ccl25 protein_coding processed_transcript MGP_LPJ_T0087830.1 MGP_LPJ_G0033250.1 mouse_genomes_project 8 1267360 1278965 + MGP_LPJ_P0087830 Ccl25 protein_coding protein_coding MGP_LPJ_T0087831.1 MGP_LPJ_G0033250.1 mouse_genomes_project 8 1267360 1280998 + MGP_LPJ_P0087831 Ccl25 protein_coding protein_coding MGP_LPJ_T0015926.1 MGP_LPJ_G0014017.1 mouse_genomes_project 8 36845702 36849549 + processed_pseudogene processed_pseudogene MGP_LPJ_T0090157.1 MGP_LPJ_G0034008.1 mouse_genomes_project 8 111421450 111527924 + MGP_LPJ_P0090157 Zfhx3 protein_coding protein_coding MGP_LPJ_T0090158.1 MGP_LPJ_G0034008.1 mouse_genomes_project 8 111434611 111695610 + MGP_LPJ_P0090158 Zfhx3 protein_coding protein_coding MGP_LPJ_T0088084.1 MGP_LPJ_G0033340.1 mouse_genomes_project 8 19588743 19605100 + MGP_LPJ_P0088084 Defb1 protein_coding protein_coding MGP_LPJ_T0090380.1 MGP_LPJ_G0034086.1 mouse_genomes_project 8 122945515 122972628 - MGP_LPJ_P0090380 Slc38a8 protein_coding protein_coding MGP_LPJ_T0090381.1 MGP_LPJ_G0034086.1 mouse_genomes_project 8 122951434 122966251 - MGP_LPJ_P0090381 Slc38a8 protein_coding protein_coding MGP_LPJ_T0090382.1 MGP_LPJ_G0034086.1 mouse_genomes_project 8 122952012 122962978 - Slc38a8 protein_coding retained_intron MGP_LPJ_T0090383.1 MGP_LPJ_G0034086.1 mouse_genomes_project 8 122962282 122972224 - MGP_LPJ_P0090383 Slc38a8 protein_coding protein_coding MGP_LPJ_T0090384.1 MGP_LPJ_G0034086.1 mouse_genomes_project 8 122965348 122972625 - MGP_LPJ_P0090384 Slc38a8 protein_coding protein_coding MGP_LPJ_T0090551.1 MGP_LPJ_G0034126.1 mouse_genomes_project 8 126086307 126087920 + MGP_LPJ_P0090551 Il17c protein_coding protein_coding MGP_LPJ_T0090298.1 MGP_LPJ_G0034055.1 mouse_genomes_project 8 114986332 115004081 - MGP_LPJ_P0090298 Kars protein_coding protein_coding MGP_LPJ_T0090299.1 MGP_LPJ_G0034055.1 mouse_genomes_project 8 114986336 115004116 - MGP_LPJ_P0090299 Kars protein_coding protein_coding MGP_LPJ_T0090300.1 MGP_LPJ_G0034055.1 mouse_genomes_project 8 114986336 115004059 - MGP_LPJ_P0090300 Kars protein_coding protein_coding MGP_LPJ_T0102472.1 MGP_LPJ_G0040508.1 mouse_genomes_project 8 68860986 68861286 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0088171.1 MGP_LPJ_G0033378.1 mouse_genomes_project 8 22416502 22418307 - MGP_LPJ_P0088171 1810011O10Rik protein_coding protein_coding MGP_LPJ_T0089401.1 MGP_LPJ_G0033759.1 mouse_genomes_project 8 85048751 85050816 - MGP_LPJ_P0089401 protein_coding protein_coding MGP_LPJ_T0090096.1 MGP_LPJ_G0033986.1 mouse_genomes_project 8 108813076 108900091 - MGP_LPJ_P0090096 Smpd3 protein_coding protein_coding MGP_LPJ_T0090062.1 MGP_LPJ_G0033976.1 mouse_genomes_project 8 108516563 108522463 - MGP_LPJ_P0090062 Dpep3 protein_coding protein_coding MGP_LPJ_T0101023.1 MGP_LPJ_G0039286.1 mouse_genomes_project 8 41493847 41493909 - Gm23531 snoRNA snoRNA MGP_LPJ_T0089477.1 MGP_LPJ_G0033777.1 mouse_genomes_project 8 85846157 85853306 - MGP_LPJ_P0089477 Dand5 protein_coding protein_coding MGP_LPJ_T0009112.1 MGP_LPJ_G0007327.1 mouse_genomes_project 8 40742060 40958360 + 2810404M03Rik lincRNA lincRNA MGP_LPJ_T0015970.1 MGP_LPJ_G0014061.1 mouse_genomes_project 8 131630259 131630694 + processed_pseudogene processed_pseudogene MGP_LPJ_T0089390.1 MGP_LPJ_G0033754.1 mouse_genomes_project 8 84986679 84988616 - MGP_LPJ_P0089390 2210011C24Rik protein_coding protein_coding MGP_LPJ_T0089391.1 MGP_LPJ_G0033754.1 mouse_genomes_project 8 84986696 84987869 - MGP_LPJ_P0089391 2210011C24Rik protein_coding protein_coding MGP_LPJ_T0089392.1 MGP_LPJ_G0033754.1 mouse_genomes_project 8 84987224 84987869 - MGP_LPJ_P0089392 2210011C24Rik protein_coding protein_coding MGP_LPJ_T0089393.1 MGP_LPJ_G0033754.1 mouse_genomes_project 8 84987901 84988629 - MGP_LPJ_P0089393 2210011C24Rik protein_coding protein_coding MGP_LPJ_T0089394.1 MGP_LPJ_G0033754.1 mouse_genomes_project 8 84987909 84988614 - MGP_LPJ_P0089394 2210011C24Rik protein_coding protein_coding MGP_LPJ_T0011002.1 MGP_LPJ_G0009120.1 mouse_genomes_project 8 84987972 84988091 - Mir1199 miRNA miRNA MGP_LPJ_T0088213.1 MGP_LPJ_G0033390.1 mouse_genomes_project 8 23544432 23590692 + MGP_LPJ_P0088213 Fgfr1 protein_coding protein_coding MGP_LPJ_T0088214.1 MGP_LPJ_G0033390.1 mouse_genomes_project 8 23549552 23613250 + MGP_LPJ_P0088214 Fgfr1 protein_coding protein_coding MGP_LPJ_T0088215.1 MGP_LPJ_G0033390.1 mouse_genomes_project 8 23549552 23613250 + MGP_LPJ_P0088215 Fgfr1 protein_coding protein_coding MGP_LPJ_T0088216.1 MGP_LPJ_G0033390.1 mouse_genomes_project 8 23549572 23613250 + MGP_LPJ_P0088216 Fgfr1 protein_coding protein_coding MGP_LPJ_T0088217.1 MGP_LPJ_G0033390.1 mouse_genomes_project 8 23549575 23612316 + MGP_LPJ_P0088217 Fgfr1 protein_coding protein_coding MGP_LPJ_T0088218.1 MGP_LPJ_G0033390.1 mouse_genomes_project 8 23549592 23612986 + MGP_LPJ_P0088218 Fgfr1 protein_coding unknown_likely_coding MGP_LPJ_T0088219.1 MGP_LPJ_G0033390.1 mouse_genomes_project 8 23549675 23590782 + Fgfr1 protein_coding processed_transcript MGP_LPJ_T0088220.1 MGP_LPJ_G0033390.1 mouse_genomes_project 8 23550099 23612314 + MGP_LPJ_P0088220 Fgfr1 protein_coding protein_coding MGP_LPJ_T0088221.1 MGP_LPJ_G0033390.1 mouse_genomes_project 8 23550619 23590853 + MGP_LPJ_P0088221 Fgfr1 protein_coding protein_coding MGP_LPJ_T0088222.1 MGP_LPJ_G0033390.1 mouse_genomes_project 8 23565044 23612112 + MGP_LPJ_P0088222 Fgfr1 protein_coding protein_coding MGP_LPJ_T0088223.1 MGP_LPJ_G0033390.1 mouse_genomes_project 8 23590740 23606641 + Fgfr1 protein_coding processed_transcript MGP_LPJ_T0088224.1 MGP_LPJ_G0033390.1 mouse_genomes_project 8 23593197 23598818 + Fgfr1 protein_coding retained_intron MGP_LPJ_T0088225.1 MGP_LPJ_G0033390.1 mouse_genomes_project 8 23598508 23612320 + Fgfr1 protein_coding retained_intron MGP_LPJ_T0088226.1 MGP_LPJ_G0033390.1 mouse_genomes_project 8 23603379 23612319 + Fgfr1 protein_coding retained_intron MGP_LPJ_T0088227.1 MGP_LPJ_G0033390.1 mouse_genomes_project 8 23605920 23609930 + Fgfr1 protein_coding retained_intron MGP_LPJ_T0088228.1 MGP_LPJ_G0033390.1 mouse_genomes_project 8 23606157 23609992 + Fgfr1 protein_coding retained_intron MGP_LPJ_T0089076.1 MGP_LPJ_G0033651.1 mouse_genomes_project 8 71764458 71773907 + MGP_LPJ_P0089076 Babam1 protein_coding protein_coding MGP_LPJ_T0089371.1 MGP_LPJ_G0033748.1 mouse_genomes_project 8 84869963 84913546 + MGP_LPJ_P0089371 Adgrl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0089372.1 MGP_LPJ_G0033748.1 mouse_genomes_project 8 84870065 84915487 + MGP_LPJ_P0089372 Adgrl1 protein_coding protein_coding MGP_LPJ_T0089373.1 MGP_LPJ_G0033748.1 mouse_genomes_project 8 84870104 84913546 + MGP_LPJ_P0089373 Adgrl1 protein_coding protein_coding MGP_LPJ_T0089374.1 MGP_LPJ_G0033748.1 mouse_genomes_project 8 84870119 84913521 + MGP_LPJ_P0089374 Adgrl1 protein_coding protein_coding MGP_LPJ_T0089375.1 MGP_LPJ_G0033748.1 mouse_genomes_project 8 84870119 84913521 + MGP_LPJ_P0089375 Adgrl1 protein_coding protein_coding MGP_LPJ_T0089376.1 MGP_LPJ_G0033748.1 mouse_genomes_project 8 84896570 84903626 + Adgrl1 protein_coding processed_transcript MGP_LPJ_T0089378.1 MGP_LPJ_G0033748.1 mouse_genomes_project 8 84908150 84911028 + Adgrl1 protein_coding retained_intron MGP_LPJ_T0089379.1 MGP_LPJ_G0033748.1 mouse_genomes_project 8 84909686 84911361 + Adgrl1 protein_coding retained_intron MGP_LPJ_T0089380.1 MGP_LPJ_G0033748.1 mouse_genomes_project 8 84911187 84912398 + MGP_LPJ_P0089380 Adgrl1 protein_coding protein_coding MGP_LPJ_T0088008.1 MGP_LPJ_G0033309.1 mouse_genomes_project 8 11460347 12241320 + MGP_LPJ_P0088008 Dlgap2 protein_coding protein_coding MGP_LPJ_T0088009.1 MGP_LPJ_G0033309.1 mouse_genomes_project 8 11460357 12241892 + MGP_LPJ_P0088009 Dlgap2 protein_coding protein_coding MGP_LPJ_T0088010.1 MGP_LPJ_G0033309.1 mouse_genomes_project 8 11547754 12240920 + MGP_LPJ_P0088010 Dlgap2 protein_coding protein_coding MGP_LPJ_T0088011.1 MGP_LPJ_G0033309.1 mouse_genomes_project 8 11547754 12241320 + MGP_LPJ_P0088011 Dlgap2 protein_coding protein_coding MGP_LPJ_T0088012.1 MGP_LPJ_G0033309.1 mouse_genomes_project 8 11747710 11878877 + Dlgap2 protein_coding processed_transcript MGP_LPJ_T0088013.1 MGP_LPJ_G0033309.1 mouse_genomes_project 8 11747924 11903221 + Dlgap2 protein_coding processed_transcript MGP_LPJ_T0088014.1 MGP_LPJ_G0033309.1 mouse_genomes_project 8 11747972 12226166 + Dlgap2 protein_coding retained_intron MGP_LPJ_T0088015.1 MGP_LPJ_G0033309.1 mouse_genomes_project 8 12129091 12153592 + Dlgap2 protein_coding processed_transcript MGP_LPJ_T0088017.1 MGP_LPJ_G0033309.1 mouse_genomes_project 8 12170551 12241610 + Dlgap2 protein_coding processed_transcript MGP_LPJ_T0089405.1 MGP_LPJ_G0033762.1 mouse_genomes_project 8 85108891 85115388 + MGP_LPJ_P0089405 Podnl1 protein_coding protein_coding MGP_LPJ_T0089406.1 MGP_LPJ_G0033762.1 mouse_genomes_project 8 85110721 85115377 + Podnl1 protein_coding retained_intron MGP_LPJ_T0090194.1 MGP_LPJ_G0034024.1 mouse_genomes_project 8 112925464 112927455 + MGP_LPJ_P0090194 Gm21964 protein_coding protein_coding MGP_LPJ_T0005413.1 MGP_LPJ_G0004587.1 mouse_genomes_project 8 113628436 113633297 + Gm15894 antisense antisense MGP_LPJ_T0090088.1 MGP_LPJ_G0033984.1 mouse_genomes_project 8 108758570 108770984 - MGP_LPJ_P0090088 Slc7a6os protein_coding protein_coding MGP_LPJ_T0088876.1 MGP_LPJ_G0033599.1 mouse_genomes_project 8 70419705 70422308 + MGP_LPJ_P0088876 Nr2c2ap protein_coding protein_coding MGP_LPJ_T0098316.1 MGP_LPJ_G0036597.1 mouse_genomes_project 8 34329092 34329206 + Gm22216 rRNA rRNA MGP_LPJ_T0011738.1 MGP_LPJ_G0009856.1 mouse_genomes_project 8 92526872 92527137 - Gm23408 misc_RNA misc_RNA MGP_LPJ_T0011001.1 MGP_LPJ_G0009119.1 mouse_genomes_project 8 84982507 84982644 + Mir8111 miRNA miRNA MGP_LPJ_T0009213.1 MGP_LPJ_G0007402.1 mouse_genomes_project 8 125494979 125505506 + Gm26812 lincRNA lincRNA MGP_LPJ_T0009214.1 MGP_LPJ_G0007402.1 mouse_genomes_project 8 125496671 125505218 + Gm26812 lincRNA lincRNA MGP_LPJ_T0088401.1 MGP_LPJ_G0033456.1 mouse_genomes_project 8 36250523 37485300 - MGP_LPJ_P0088401 Sgcz protein_coding nonsense_mediated_decay MGP_LPJ_T0088402.1 MGP_LPJ_G0033456.1 mouse_genomes_project 8 36250779 37485300 - MGP_LPJ_P0088402 Sgcz protein_coding protein_coding MGP_LPJ_T0102468.1 MGP_LPJ_G0040504.1 mouse_genomes_project 8 16840997 16843446 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0101054.1 MGP_LPJ_G0039317.1 mouse_genomes_project 8 97990114 97990246 - Gm22780 snoRNA snoRNA MGP_LPJ_T0089008.1 MGP_LPJ_G0033628.1 mouse_genomes_project 8 71010849 71011392 - MGP_LPJ_P0089008 protein_coding protein_coding MGP_LPJ_T0088111.1 MGP_LPJ_G0033357.1 mouse_genomes_project 8 20068634 20104803 + MGP_LPJ_P0088111 Thsd1 protein_coding protein_coding MGP_LPJ_T0088112.1 MGP_LPJ_G0033357.1 mouse_genomes_project 8 20068666 20103849 + MGP_LPJ_P0088112 Thsd1 protein_coding protein_coding MGP_LPJ_T0088113.1 MGP_LPJ_G0033357.1 mouse_genomes_project 8 20068683 20103847 + Thsd1 protein_coding processed_transcript MGP_LPJ_T0002363.1 MGP_LPJ_G0002270.1 mouse_genomes_project 8 111458531 111463739 + TEC TEC MGP_LPJ_T0090284.1 MGP_LPJ_G0034046.1 mouse_genomes_project 8 114575065 114579868 - Ldhd protein_coding retained_intron MGP_LPJ_T0090285.1 MGP_LPJ_G0034046.1 mouse_genomes_project 8 114576783 114581616 - Ldhd protein_coding retained_intron MGP_LPJ_T0090286.1 MGP_LPJ_G0034046.1 mouse_genomes_project 8 114577551 114581655 - MGP_LPJ_P0090286 Ldhd protein_coding protein_coding MGP_LPJ_T0005386.1 MGP_LPJ_G0004565.1 mouse_genomes_project 8 61763845 61839182 + 4930512H18Rik antisense antisense MGP_LPJ_T0009199.1 MGP_LPJ_G0007391.1 mouse_genomes_project 8 124151826 124152552 + Gm26739 lincRNA lincRNA MGP_LPJ_T0089527.1 MGP_LPJ_G0033789.1 mouse_genomes_project 8 86002034 86010042 - MGP_LPJ_P0089527 Rnaseh2a protein_coding protein_coding MGP_LPJ_T0089528.1 MGP_LPJ_G0033789.1 mouse_genomes_project 8 86002043 86010120 - MGP_LPJ_P0089528 Rnaseh2a protein_coding protein_coding MGP_LPJ_T0089529.1 MGP_LPJ_G0033789.1 mouse_genomes_project 8 86002054 86002492 - Rnaseh2a protein_coding retained_intron MGP_LPJ_T0089530.1 MGP_LPJ_G0033789.1 mouse_genomes_project 8 86002349 86010017 - Rnaseh2a protein_coding retained_intron MGP_LPJ_T0089531.1 MGP_LPJ_G0033789.1 mouse_genomes_project 8 86009662 86013785 - MGP_LPJ_P0089531 Rnaseh2a protein_coding protein_coding MGP_LPJ_T0089532.1 MGP_LPJ_G0033789.1 mouse_genomes_project 8 86010007 86010933 - MGP_LPJ_P0089532 Rnaseh2a protein_coding protein_coding MGP_LPJ_T0089533.1 MGP_LPJ_G0033789.1 mouse_genomes_project 8 86010284 86013600 - Rnaseh2a protein_coding processed_transcript MGP_LPJ_T0088488.1 MGP_LPJ_G0033484.1 mouse_genomes_project 8 44457204 44473614 - MGP_LPJ_P0088488 Tlr3 protein_coding protein_coding MGP_LPJ_T0088489.1 MGP_LPJ_G0033484.1 mouse_genomes_project 8 44457450 44473683 - MGP_LPJ_P0088489 Tlr3 protein_coding protein_coding MGP_LPJ_T0010980.1 MGP_LPJ_G0009098.1 mouse_genomes_project 8 25790823 25790905 + Gm44493 miRNA miRNA MGP_LPJ_T0089213.1 MGP_LPJ_G0033696.1 mouse_genomes_project 8 73293723 73312595 + MGP_LPJ_P0089213 Sin3b protein_coding protein_coding MGP_LPJ_T0089214.1 MGP_LPJ_G0033696.1 mouse_genomes_project 8 73293723 73331411 + MGP_LPJ_P0089214 Sin3b protein_coding protein_coding MGP_LPJ_T0090198.1 MGP_LPJ_G0034027.1 mouse_genomes_project 8 113108823 113478989 + MGP_LPJ_P0090198 Hydin protein_coding protein_coding MGP_LPJ_T0090199.1 MGP_LPJ_G0034027.1 mouse_genomes_project 8 113108829 113478793 + MGP_LPJ_P0090199 Hydin protein_coding unknown_likely_coding MGP_LPJ_T0090253.1 MGP_LPJ_G0034040.1 mouse_genomes_project 8 114065182 114184999 - MGP_LPJ_P0090253 Glg1 protein_coding protein_coding MGP_LPJ_T0090254.1 MGP_LPJ_G0034040.1 mouse_genomes_project 8 114068286 114088435 - MGP_LPJ_P0090254 Glg1 protein_coding protein_coding MGP_LPJ_T0090255.1 MGP_LPJ_G0034040.1 mouse_genomes_project 8 114068326 114184983 - MGP_LPJ_P0090255 Glg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0090256.1 MGP_LPJ_G0034040.1 mouse_genomes_project 8 114068659 114184999 - MGP_LPJ_P0090256 Glg1 protein_coding protein_coding MGP_LPJ_T0089737.1 MGP_LPJ_G0033854.1 mouse_genomes_project 8 94851561 94863167 - MGP_LPJ_P0089737 Ces1h protein_coding protein_coding MGP_LPJ_T0005401.1 MGP_LPJ_G0004578.1 mouse_genomes_project 8 95947643 95955381 - Gm15890 antisense antisense MGP_LPJ_T0090681.1 MGP_LPJ_G0034162.1 mouse_genomes_project 8 127269849 127287665 + MGP_LPJ_P0090681 Gas8 protein_coding protein_coding MGP_LPJ_T0090002.1 MGP_LPJ_G0033949.1 mouse_genomes_project 8 107866905 107901541 - MGP_LPJ_P0090002 Kctd19 protein_coding protein_coding MGP_LPJ_T0090003.1 MGP_LPJ_G0033949.1 mouse_genomes_project 8 107866905 107901541 - MGP_LPJ_P0090003 Kctd19 protein_coding protein_coding MGP_LPJ_T0090004.1 MGP_LPJ_G0033949.1 mouse_genomes_project 8 107867040 107869425 - MGP_LPJ_P0090004 Kctd19 protein_coding protein_coding MGP_LPJ_T0090005.1 MGP_LPJ_G0033949.1 mouse_genomes_project 8 107877833 107901495 - MGP_LPJ_P0090005 Kctd19 protein_coding nonsense_mediated_decay MGP_LPJ_T0090051.1 MGP_LPJ_G0033970.1 mouse_genomes_project 8 108426201 108427658 + MGP_LPJ_P0090051 Nrn1l protein_coding protein_coding MGP_LPJ_T0090052.1 MGP_LPJ_G0033970.1 mouse_genomes_project 8 108426206 108427652 + MGP_LPJ_P0090052 Nrn1l protein_coding protein_coding MGP_LPJ_T0015948.1 MGP_LPJ_G0014039.1 mouse_genomes_project 8 81761829 81762823 + processed_pseudogene processed_pseudogene MGP_LPJ_T0089026.1 MGP_LPJ_G0033635.1 mouse_genomes_project 8 71100918 71115284 - MGP_LPJ_P0089026 Mast3 protein_coding protein_coding MGP_LPJ_T0018432.1 MGP_LPJ_G0015638.1 mouse_genomes_project 8 86102834 86110126 - A230103J11Rik processed_transcript processed_transcript MGP_LPJ_T0018433.1 MGP_LPJ_G0015638.1 mouse_genomes_project 8 86102863 86110109 - A230103J11Rik processed_transcript processed_transcript MGP_LPJ_T0088860.1 MGP_LPJ_G0033592.1 mouse_genomes_project 8 70186272 70276168 - MGP_LPJ_P0088860 Gatad2a protein_coding protein_coding MGP_LPJ_T0088861.1 MGP_LPJ_G0033592.1 mouse_genomes_project 8 70186272 70255037 - MGP_LPJ_P0088861 Gatad2a protein_coding protein_coding MGP_LPJ_T0088862.1 MGP_LPJ_G0033592.1 mouse_genomes_project 8 70186272 70276168 - MGP_LPJ_P0088862 Gatad2a protein_coding protein_coding MGP_LPJ_T0088863.1 MGP_LPJ_G0033592.1 mouse_genomes_project 8 70187985 70230140 - MGP_LPJ_P0088863 Gatad2a protein_coding unknown_likely_coding MGP_LPJ_T0088819.1 MGP_LPJ_G0033577.1 mouse_genomes_project 8 69666314 69666713 - MGP_LPJ_P0088819 protein_coding protein_coding MGP_LPJ_T0089292.1 MGP_LPJ_G0033721.1 mouse_genomes_project 8 80444181 80479947 - MGP_LPJ_P0089292 Abce1 protein_coding protein_coding MGP_LPJ_T0088559.1 MGP_LPJ_G0033497.1 mouse_genomes_project 8 45668383 45703156 + MGP_LPJ_P0088559 Cenpu protein_coding nonsense_mediated_decay MGP_LPJ_T0088560.1 MGP_LPJ_G0033497.1 mouse_genomes_project 8 45668388 45702733 + MGP_LPJ_P0088560 Cenpu protein_coding protein_coding MGP_LPJ_T0088561.1 MGP_LPJ_G0033497.1 mouse_genomes_project 8 45668389 45672565 + Cenpu protein_coding retained_intron MGP_LPJ_T0088562.1 MGP_LPJ_G0033497.1 mouse_genomes_project 8 45668415 45701517 + MGP_LPJ_P0088562 Cenpu protein_coding protein_coding MGP_LPJ_T0088563.1 MGP_LPJ_G0033497.1 mouse_genomes_project 8 45676405 45678784 + Cenpu protein_coding processed_transcript MGP_LPJ_T0088564.1 MGP_LPJ_G0033497.1 mouse_genomes_project 8 45678054 45695979 + Cenpu protein_coding retained_intron MGP_LPJ_T0088565.1 MGP_LPJ_G0033497.1 mouse_genomes_project 8 45696321 45701527 + Cenpu protein_coding retained_intron MGP_LPJ_T0015916.1 MGP_LPJ_G0014007.1 mouse_genomes_project 8 26405384 26406995 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015908.1 MGP_LPJ_G0013999.1 mouse_genomes_project 8 17140323 17140914 + processed_pseudogene processed_pseudogene MGP_LPJ_T0087995.1 MGP_LPJ_G0033302.1 mouse_genomes_project 8 11203884 11218736 + MGP_LPJ_P0087995 Champ1 protein_coding protein_coding MGP_LPJ_T0087996.1 MGP_LPJ_G0033302.1 mouse_genomes_project 8 11203947 11216910 + MGP_LPJ_P0087996 Champ1 protein_coding protein_coding MGP_LPJ_T0088625.1 MGP_LPJ_G0033522.1 mouse_genomes_project 8 54265182 54361897 - MGP_LPJ_P0088625 Wdr17 protein_coding protein_coding MGP_LPJ_T0088626.1 MGP_LPJ_G0033522.1 mouse_genomes_project 8 54267433 54367606 - MGP_LPJ_P0088626 Wdr17 protein_coding protein_coding MGP_LPJ_T0088627.1 MGP_LPJ_G0033522.1 mouse_genomes_project 8 54267473 54287492 - Wdr17 protein_coding retained_intron MGP_LPJ_T0088628.1 MGP_LPJ_G0033522.1 mouse_genomes_project 8 54267482 54367586 - MGP_LPJ_P0088628 Wdr17 protein_coding protein_coding MGP_LPJ_T0088629.1 MGP_LPJ_G0033522.1 mouse_genomes_project 8 54267494 54367563 - MGP_LPJ_P0088629 Wdr17 protein_coding protein_coding MGP_LPJ_T0088630.1 MGP_LPJ_G0033522.1 mouse_genomes_project 8 54288098 54296795 - Wdr17 protein_coding retained_intron MGP_LPJ_T0088631.1 MGP_LPJ_G0033522.1 mouse_genomes_project 8 54307882 54334213 - MGP_LPJ_P0088631 Wdr17 protein_coding protein_coding MGP_LPJ_T0088632.1 MGP_LPJ_G0033522.1 mouse_genomes_project 8 54307926 54367568 - Wdr17 protein_coding processed_transcript MGP_LPJ_T0088633.1 MGP_LPJ_G0033522.1 mouse_genomes_project 8 54331503 54367566 - MGP_LPJ_P0088633 Wdr17 protein_coding protein_coding MGP_LPJ_T0088634.1 MGP_LPJ_G0033522.1 mouse_genomes_project 8 54331835 54367692 - Wdr17 protein_coding processed_transcript MGP_LPJ_T0088635.1 MGP_LPJ_G0033522.1 mouse_genomes_project 8 54337394 54537042 - MGP_LPJ_P0088635 Wdr17 protein_coding protein_coding MGP_LPJ_T0090186.1 MGP_LPJ_G0034019.1 mouse_genomes_project 8 112746047 112762183 - MGP_LPJ_P0090186 Marveld3 protein_coding protein_coding MGP_LPJ_T0090187.1 MGP_LPJ_G0034019.1 mouse_genomes_project 8 112751028 112762218 - MGP_LPJ_P0090187 Marveld3 protein_coding protein_coding MGP_LPJ_T0090188.1 MGP_LPJ_G0034019.1 mouse_genomes_project 8 112759645 112762068 - Marveld3 protein_coding retained_intron MGP_LPJ_T0090577.1 MGP_LPJ_G0034133.1 mouse_genomes_project 8 126243162 126248255 + MGP_LPJ_P0090577 Cdt1 protein_coding protein_coding MGP_LPJ_T0009085.1 MGP_LPJ_G0007307.1 mouse_genomes_project 8 9476034 9476436 + Gm29175 lincRNA lincRNA MGP_LPJ_T0090362.1 MGP_LPJ_G0034081.1 mouse_genomes_project 8 121666835 122780457 + MGP_LPJ_P0090362 Cdh13 protein_coding protein_coding MGP_LPJ_T0090363.1 MGP_LPJ_G0034081.1 mouse_genomes_project 8 121666857 122268289 + Cdh13 protein_coding retained_intron MGP_LPJ_T0090364.1 MGP_LPJ_G0034081.1 mouse_genomes_project 8 121666877 122388421 + Cdh13 protein_coding retained_intron MGP_LPJ_T0090365.1 MGP_LPJ_G0034081.1 mouse_genomes_project 8 121666898 122170128 + Cdh13 protein_coding retained_intron MGP_LPJ_T0090366.1 MGP_LPJ_G0034081.1 mouse_genomes_project 8 121666899 122645243 + Cdh13 protein_coding retained_intron MGP_LPJ_T0090367.1 MGP_LPJ_G0034081.1 mouse_genomes_project 8 121697483 122272931 + Cdh13 protein_coding processed_transcript MGP_LPJ_T0090368.1 MGP_LPJ_G0034081.1 mouse_genomes_project 8 122727876 122767649 + Cdh13 protein_coding processed_transcript MGP_LPJ_T0089716.1 MGP_LPJ_G0033846.1 mouse_genomes_project 8 94403221 94443026 + MGP_LPJ_P0089716 Slc6a2 protein_coding protein_coding MGP_LPJ_T0089717.1 MGP_LPJ_G0033846.1 mouse_genomes_project 8 94404190 94445771 + MGP_LPJ_P0089717 Slc6a2 protein_coding protein_coding MGP_LPJ_T0088986.1 MGP_LPJ_G0033619.1 mouse_genomes_project 8 70825570 70834428 + MGP_LPJ_P0088986 Fkbp8 protein_coding protein_coding MGP_LPJ_T0088987.1 MGP_LPJ_G0033619.1 mouse_genomes_project 8 70825593 70834426 + MGP_LPJ_P0088987 Fkbp8 protein_coding protein_coding MGP_LPJ_T0088988.1 MGP_LPJ_G0033619.1 mouse_genomes_project 8 70825608 70830319 + Fkbp8 protein_coding retained_intron MGP_LPJ_T0088989.1 MGP_LPJ_G0033619.1 mouse_genomes_project 8 70825692 70834427 + MGP_LPJ_P0088989 Fkbp8 protein_coding protein_coding MGP_LPJ_T0088990.1 MGP_LPJ_G0033619.1 mouse_genomes_project 8 70825855 70828462 + Fkbp8 protein_coding retained_intron MGP_LPJ_T0088991.1 MGP_LPJ_G0033619.1 mouse_genomes_project 8 70826662 70827425 + MGP_LPJ_P0088991 Fkbp8 protein_coding protein_coding MGP_LPJ_T0088992.1 MGP_LPJ_G0033619.1 mouse_genomes_project 8 70828995 70833261 + Fkbp8 protein_coding retained_intron MGP_LPJ_T0088993.1 MGP_LPJ_G0033619.1 mouse_genomes_project 8 70829605 70834056 + Fkbp8 protein_coding retained_intron MGP_LPJ_T0088994.1 MGP_LPJ_G0033619.1 mouse_genomes_project 8 70829992 70834071 + Fkbp8 protein_coding retained_intron MGP_LPJ_T0088995.1 MGP_LPJ_G0033619.1 mouse_genomes_project 8 70830049 70833967 + Fkbp8 protein_coding retained_intron MGP_LPJ_T0088996.1 MGP_LPJ_G0033619.1 mouse_genomes_project 8 70833206 70834157 + MGP_LPJ_P0088996 Fkbp8 protein_coding nonsense_mediated_decay MGP_LPJ_T0088429.1 MGP_LPJ_G0033464.1 mouse_genomes_project 8 39376378 39462728 - MGP_LPJ_P0088429 Mtmr7 protein_coding nonsense_mediated_decay MGP_LPJ_T0088430.1 MGP_LPJ_G0033464.1 mouse_genomes_project 8 39376384 39462715 - MGP_LPJ_P0088430 Mtmr7 protein_coding protein_coding MGP_LPJ_T0088431.1 MGP_LPJ_G0033464.1 mouse_genomes_project 8 39379162 39415675 - MGP_LPJ_P0088431 Mtmr7 protein_coding protein_coding MGP_LPJ_T0088432.1 MGP_LPJ_G0033464.1 mouse_genomes_project 8 39379969 39462731 - MGP_LPJ_P0088432 Mtmr7 protein_coding protein_coding MGP_LPJ_T0088433.1 MGP_LPJ_G0033464.1 mouse_genomes_project 8 39392182 39462698 - MGP_LPJ_P0088433 Mtmr7 protein_coding protein_coding MGP_LPJ_T0088434.1 MGP_LPJ_G0033464.1 mouse_genomes_project 8 39433890 39462736 - Mtmr7 protein_coding processed_transcript MGP_LPJ_T0087717.1 MGP_LPJ_G0033220.1 mouse_genomes_project 8 416542 420613 + MGP_LPJ_P0087717 Zfp358 protein_coding protein_coding MGP_LPJ_T0089730.1 MGP_LPJ_G0033852.1 mouse_genomes_project 8 94764150 94787638 - MGP_LPJ_P0089730 Ces1f protein_coding protein_coding MGP_LPJ_T0089731.1 MGP_LPJ_G0033852.1 mouse_genomes_project 8 94764502 94766654 - Ces1f protein_coding retained_intron MGP_LPJ_T0089732.1 MGP_LPJ_G0033852.1 mouse_genomes_project 8 94773337 94775229 - Ces1f protein_coding retained_intron MGP_LPJ_T0089733.1 MGP_LPJ_G0033852.1 mouse_genomes_project 8 94773789 94775356 - Ces1f protein_coding retained_intron MGP_LPJ_T0089734.1 MGP_LPJ_G0033852.1 mouse_genomes_project 8 94781871 94783294 - Ces1f protein_coding retained_intron MGP_LPJ_T0089735.1 MGP_LPJ_G0033852.1 mouse_genomes_project 8 94782180 94787618 - MGP_LPJ_P0089735 Ces1f protein_coding nonsense_mediated_decay MGP_LPJ_T0089895.1 MGP_LPJ_G0033905.1 mouse_genomes_project 8 106381635 106426982 + MGP_LPJ_P0089895 Cdh5 protein_coding protein_coding MGP_LPJ_T0089116.1 MGP_LPJ_G0033665.1 mouse_genomes_project 8 71982095 71993108 + MGP_LPJ_P0089116 Fam129c protein_coding protein_coding MGP_LPJ_T0089117.1 MGP_LPJ_G0033665.1 mouse_genomes_project 8 71983145 71993330 + Fam129c protein_coding retained_intron MGP_LPJ_T0089118.1 MGP_LPJ_G0033665.1 mouse_genomes_project 8 71985238 71987145 + Fam129c protein_coding processed_transcript MGP_LPJ_T0089119.1 MGP_LPJ_G0033665.1 mouse_genomes_project 8 71985972 71987639 + Fam129c protein_coding retained_intron MGP_LPJ_T0089120.1 MGP_LPJ_G0033665.1 mouse_genomes_project 8 71987671 71988348 + Fam129c protein_coding retained_intron MGP_LPJ_T0089121.1 MGP_LPJ_G0033665.1 mouse_genomes_project 8 71987755 71993330 + Fam129c protein_coding retained_intron MGP_LPJ_T0089122.1 MGP_LPJ_G0033665.1 mouse_genomes_project 8 71990149 71992977 + MGP_LPJ_P0089122 Fam129c protein_coding nonsense_mediated_decay MGP_LPJ_T0089123.1 MGP_LPJ_G0033665.1 mouse_genomes_project 8 71990366 71993339 + MGP_LPJ_P0089123 Fam129c protein_coding protein_coding MGP_LPJ_T0089297.1 MGP_LPJ_G0033725.1 mouse_genomes_project 8 81434445 81507715 + MGP_LPJ_P0089297 Frem3 protein_coding protein_coding MGP_LPJ_T0090799.1 MGP_LPJ_G0034201.1 mouse_genomes_project 8 132479686 132639622 + MGP_LPJ_P0090799 Nrp1 protein_coding protein_coding MGP_LPJ_T0090191.1 MGP_LPJ_G0034021.1 mouse_genomes_project 8 112831507 112843817 - MGP_LPJ_P0090191 Chst4 protein_coding protein_coding MGP_LPJ_T0089248.1 MGP_LPJ_G0033708.1 mouse_genomes_project 8 78191659 78224279 + MGP_LPJ_P0089248 Prmt9 protein_coding protein_coding MGP_LPJ_T0089249.1 MGP_LPJ_G0033708.1 mouse_genomes_project 8 78191669 78206756 + Prmt9 protein_coding retained_intron MGP_LPJ_T0089250.1 MGP_LPJ_G0033708.1 mouse_genomes_project 8 78191672 78224279 + MGP_LPJ_P0089250 Prmt9 protein_coding protein_coding MGP_LPJ_T0089251.1 MGP_LPJ_G0033708.1 mouse_genomes_project 8 78206441 78207870 + Prmt9 protein_coding retained_intron MGP_LPJ_T0011036.1 MGP_LPJ_G0009154.1 mouse_genomes_project 8 114107282 114107364 + Gm23193 miRNA miRNA MGP_LPJ_T0102471.1 MGP_LPJ_G0040507.1 mouse_genomes_project 8 19561430 19562257 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0089198.1 MGP_LPJ_G0033690.1 mouse_genomes_project 8 73040816 73056460 - MGP_LPJ_P0089198 Cherp protein_coding protein_coding MGP_LPJ_T0090017.1 MGP_LPJ_G0033955.1 mouse_genomes_project 8 108061922 108143069 - MGP_LPJ_P0090017 Agrp protein_coding protein_coding MGP_LPJ_T0090018.1 MGP_LPJ_G0033955.1 mouse_genomes_project 8 108061922 108063523 - MGP_LPJ_P0090018 Agrp protein_coding protein_coding MGP_LPJ_T0090019.1 MGP_LPJ_G0033955.1 mouse_genomes_project 8 108062022 108076225 - MGP_LPJ_P0090019 Agrp protein_coding protein_coding MGP_LPJ_T0088470.1 MGP_LPJ_G0033476.1 mouse_genomes_project 8 42695091 42697413 - MGP_LPJ_P0088470 protein_coding protein_coding MGP_LPJ_T0090751.1 MGP_LPJ_G0034190.1 mouse_genomes_project 8 129664834 129680155 + Ntpcr protein_coding processed_transcript MGP_LPJ_T0090752.1 MGP_LPJ_G0034190.1 mouse_genomes_project 8 129664899 129682665 + MGP_LPJ_P0090752 Ntpcr protein_coding protein_coding MGP_LPJ_T0090753.1 MGP_LPJ_G0034190.1 mouse_genomes_project 8 129664903 129673008 + Ntpcr protein_coding processed_transcript MGP_LPJ_T0090754.1 MGP_LPJ_G0034190.1 mouse_genomes_project 8 129667961 129682890 + Ntpcr protein_coding processed_transcript MGP_LPJ_T0090755.1 MGP_LPJ_G0034190.1 mouse_genomes_project 8 129669074 129683091 + MGP_LPJ_P0090755 Ntpcr protein_coding protein_coding MGP_LPJ_T0090756.1 MGP_LPJ_G0034190.1 mouse_genomes_project 8 129669104 129671201 + Ntpcr protein_coding retained_intron MGP_LPJ_T0090757.1 MGP_LPJ_G0034190.1 mouse_genomes_project 8 129669109 129674051 + MGP_LPJ_P0090757 Ntpcr protein_coding protein_coding MGP_LPJ_T0090758.1 MGP_LPJ_G0034190.1 mouse_genomes_project 8 129670706 129682853 + MGP_LPJ_P0090758 Ntpcr protein_coding protein_coding MGP_LPJ_T0088548.1 MGP_LPJ_G0033494.1 mouse_genomes_project 8 45306588 45311076 - MGP_LPJ_P0088548 Slc25a4 protein_coding protein_coding MGP_LPJ_T0088549.1 MGP_LPJ_G0033494.1 mouse_genomes_project 8 45307761 45310822 - Slc25a4 protein_coding retained_intron MGP_LPJ_T0005346.1 MGP_LPJ_G0004534.1 mouse_genomes_project 8 161026 161964 + Gm16180 antisense antisense MGP_LPJ_T0089270.1 MGP_LPJ_G0033715.1 mouse_genomes_project 8 79536913 79553187 - MGP_LPJ_P0089270 Lsm6 protein_coding protein_coding MGP_LPJ_T0089271.1 MGP_LPJ_G0033715.1 mouse_genomes_project 8 79538499 79553187 - MGP_LPJ_P0089271 Lsm6 protein_coding protein_coding MGP_LPJ_T0089272.1 MGP_LPJ_G0033715.1 mouse_genomes_project 8 79540085 79542259 - Lsm6 protein_coding retained_intron MGP_LPJ_T0089273.1 MGP_LPJ_G0033715.1 mouse_genomes_project 8 79540106 79545263 - Lsm6 protein_coding retained_intron MGP_LPJ_T0011728.1 MGP_LPJ_G0009846.1 mouse_genomes_project 8 23722504 23722826 + Gm23094 misc_RNA misc_RNA MGP_LPJ_T0009128.1 MGP_LPJ_G0007342.1 mouse_genomes_project 8 73077710 73090180 + Gm17435 lincRNA lincRNA MGP_LPJ_T0090449.1 MGP_LPJ_G0034107.1 mouse_genomes_project 8 124212978 124226879 - MGP_LPJ_P0090449 Emc8 protein_coding protein_coding MGP_LPJ_T0090450.1 MGP_LPJ_G0034107.1 mouse_genomes_project 8 124215042 124226913 - Emc8 protein_coding retained_intron MGP_LPJ_T0090451.1 MGP_LPJ_G0034107.1 mouse_genomes_project 8 124216915 124227474 - MGP_LPJ_P0090451 Emc8 protein_coding nonsense_mediated_decay MGP_LPJ_T0090452.1 MGP_LPJ_G0034107.1 mouse_genomes_project 8 124217088 124226664 - MGP_LPJ_P0090452 Emc8 protein_coding protein_coding MGP_LPJ_T0090453.1 MGP_LPJ_G0034107.1 mouse_genomes_project 8 124217114 124226737 - MGP_LPJ_P0090453 Emc8 protein_coding protein_coding MGP_LPJ_T0090454.1 MGP_LPJ_G0034107.1 mouse_genomes_project 8 124219038 124226904 - MGP_LPJ_P0090454 Emc8 protein_coding protein_coding MGP_LPJ_T0090455.1 MGP_LPJ_G0034107.1 mouse_genomes_project 8 124219711 124227014 - Emc8 protein_coding retained_intron MGP_LPJ_T0010968.1 MGP_LPJ_G0009086.1 mouse_genomes_project 8 10183219 10183349 + Gm38671 miRNA miRNA MGP_LPJ_T0089036.1 MGP_LPJ_G0033643.1 mouse_genomes_project 8 71239306 71250905 + MGP_LPJ_P0089036 Map1s protein_coding protein_coding MGP_LPJ_T0089925.1 MGP_LPJ_G0033918.1 mouse_genomes_project 8 106876982 106886463 + MGP_LPJ_P0089925 Car7 protein_coding protein_coding MGP_LPJ_T0089926.1 MGP_LPJ_G0033918.1 mouse_genomes_project 8 106883995 106885179 + Car7 protein_coding retained_intron MGP_LPJ_T0088255.1 MGP_LPJ_G0033399.1 mouse_genomes_project 8 23865793 23888674 - MGP_LPJ_P0088255 Ash2l protein_coding protein_coding MGP_LPJ_T0088256.1 MGP_LPJ_G0033399.1 mouse_genomes_project 8 23866127 23888657 - MGP_LPJ_P0088256 Ash2l protein_coding nonsense_mediated_decay MGP_LPJ_T0088257.1 MGP_LPJ_G0033399.1 mouse_genomes_project 8 23866473 23888664 - MGP_LPJ_P0088257 Ash2l protein_coding nonsense_mediated_decay MGP_LPJ_T0088258.1 MGP_LPJ_G0033399.1 mouse_genomes_project 8 23867003 23888652 - MGP_LPJ_P0088258 Ash2l protein_coding protein_coding MGP_LPJ_T0088259.1 MGP_LPJ_G0033399.1 mouse_genomes_project 8 23872349 23873176 - Ash2l protein_coding retained_intron MGP_LPJ_T0088260.1 MGP_LPJ_G0033399.1 mouse_genomes_project 8 23872744 23878945 - Ash2l protein_coding retained_intron MGP_LPJ_T0088261.1 MGP_LPJ_G0033399.1 mouse_genomes_project 8 23876593 23878401 - Ash2l protein_coding processed_transcript MGP_LPJ_T0090103.1 MGP_LPJ_G0033991.1 mouse_genomes_project 8 109242081 109430125 + MGP_LPJ_P0090103 Tango6 protein_coding protein_coding MGP_LPJ_T0009190.1 MGP_LPJ_G0007384.1 mouse_genomes_project 8 109148316 109156619 + 1110028F18Rik lincRNA lincRNA MGP_LPJ_T0088518.1 MGP_LPJ_G0033487.1 mouse_genomes_project 8 45020196 45029714 + MGP_LPJ_P0088518 Ccdc110 protein_coding protein_coding MGP_LPJ_T0088519.1 MGP_LPJ_G0033487.1 mouse_genomes_project 8 45020282 45027069 + MGP_LPJ_P0088519 Ccdc110 protein_coding nonsense_mediated_decay MGP_LPJ_T0087728.1 MGP_LPJ_G0033223.1 mouse_genomes_project 8 493905 499566 + protein_coding retained_intron MGP_LPJ_T0087729.1 MGP_LPJ_G0033223.1 mouse_genomes_project 8 493910 504363 + protein_coding retained_intron MGP_LPJ_T0088065.1 MGP_LPJ_G0033323.1 mouse_genomes_project 8 16550311 16553447 - MGP_LPJ_P0088065 Defb38 protein_coding protein_coding MGP_LPJ_T0088344.1 MGP_LPJ_G0033437.1 mouse_genomes_project 8 32169235 32174898 - MGP_LPJ_P0088344 Smim18 protein_coding protein_coding MGP_LPJ_T0089939.1 MGP_LPJ_G0033925.1 mouse_genomes_project 8 107197260 107238859 + protein_coding processed_transcript MGP_LPJ_T0089940.1 MGP_LPJ_G0033925.1 mouse_genomes_project 8 107197868 107238859 + protein_coding processed_transcript MGP_LPJ_T0089941.1 MGP_LPJ_G0033925.1 mouse_genomes_project 8 107225613 107228153 + protein_coding processed_transcript MGP_LPJ_T0005360.1 MGP_LPJ_G0004544.1 mouse_genomes_project 8 10312665 10319308 + Gm17023 antisense antisense MGP_LPJ_T0089000.1 MGP_LPJ_G0033623.1 mouse_genomes_project 8 70920884 70924898 + MGP_LPJ_P0089000 Lrrc25 protein_coding protein_coding MGP_LPJ_T0089682.1 MGP_LPJ_G0033836.1 mouse_genomes_project 8 92407862 92464861 + MGP_LPJ_P0089682 Rbl2 protein_coding protein_coding MGP_LPJ_T0089683.1 MGP_LPJ_G0033836.1 mouse_genomes_project 8 92407899 92417772 + Rbl2 protein_coding retained_intron MGP_LPJ_T0089684.1 MGP_LPJ_G0033836.1 mouse_genomes_project 8 92445616 92456122 + Rbl2 protein_coding retained_intron MGP_LPJ_T0089685.1 MGP_LPJ_G0033836.1 mouse_genomes_project 8 92445653 92455068 + Rbl2 protein_coding processed_transcript MGP_LPJ_T0089687.1 MGP_LPJ_G0033836.1 mouse_genomes_project 8 92453254 92456862 + Rbl2 protein_coding retained_intron MGP_LPJ_T0089688.1 MGP_LPJ_G0033836.1 mouse_genomes_project 8 92454673 92456802 + Rbl2 protein_coding retained_intron MGP_LPJ_T0089689.1 MGP_LPJ_G0033836.1 mouse_genomes_project 8 92456146 92457124 + Rbl2 protein_coding retained_intron MGP_LPJ_T0087994.1 MGP_LPJ_G0033301.1 mouse_genomes_project 8 11076840 11091445 + MGP_LPJ_P0087994 Upf3a protein_coding protein_coding MGP_LPJ_T0088285.1 MGP_LPJ_G0033408.1 mouse_genomes_project 8 25161175 25176829 + MGP_LPJ_P0088285 Erlin2 protein_coding protein_coding MGP_LPJ_T0011037.1 MGP_LPJ_G0009155.1 mouse_genomes_project 8 114396180 114396303 + Mir1957b miRNA miRNA MGP_LPJ_T0088116.1 MGP_LPJ_G0033360.1 mouse_genomes_project 8 20260999 20280315 + MGP_LPJ_P0088116 Mrps31 protein_coding protein_coding MGP_LPJ_T0089329.1 MGP_LPJ_G0033736.1 mouse_genomes_project 8 84237250 84256696 - MGP_LPJ_P0089329 Elmod2 protein_coding protein_coding MGP_LPJ_T0089330.1 MGP_LPJ_G0033736.1 mouse_genomes_project 8 84237640 84256696 - MGP_LPJ_P0089330 Elmod2 protein_coding protein_coding MGP_LPJ_T0089331.1 MGP_LPJ_G0033736.1 mouse_genomes_project 8 84240104 84248831 - Elmod2 protein_coding retained_intron MGP_LPJ_T0089332.1 MGP_LPJ_G0033736.1 mouse_genomes_project 8 84242380 84255658 - Elmod2 protein_coding retained_intron MGP_LPJ_T0089333.1 MGP_LPJ_G0033736.1 mouse_genomes_project 8 84248422 84256614 - Elmod2 protein_coding retained_intron MGP_LPJ_T0089334.1 MGP_LPJ_G0033736.1 mouse_genomes_project 8 84252899 84256614 - Elmod2 protein_coding retained_intron MGP_LPJ_T0010967.1 MGP_LPJ_G0009085.1 mouse_genomes_project 8 9886858 9886962 + Gm26483 miRNA miRNA MGP_LPJ_T0005404.1 MGP_LPJ_G0004581.1 mouse_genomes_project 8 106991075 107003437 + 1700082M22Rik antisense antisense MGP_LPJ_T0005405.1 MGP_LPJ_G0004581.1 mouse_genomes_project 8 106997478 107003297 + 1700082M22Rik antisense antisense MGP_LPJ_T0088176.1 MGP_LPJ_G0033380.1 mouse_genomes_project 8 22577596 22589148 - MGP_LPJ_P0088176 Ido1 protein_coding protein_coding MGP_LPJ_T0088177.1 MGP_LPJ_G0033380.1 mouse_genomes_project 8 22577596 22590491 - MGP_LPJ_P0088177 Ido1 protein_coding protein_coding MGP_LPJ_T0089239.1 MGP_LPJ_G0033706.1 mouse_genomes_project 8 77498615 77507992 + MGP_LPJ_P0089239 Nr3c2 protein_coding protein_coding MGP_LPJ_T0089240.1 MGP_LPJ_G0033706.1 mouse_genomes_project 8 77498940 77867989 + MGP_LPJ_P0089240 Nr3c2 protein_coding protein_coding MGP_LPJ_T0089241.1 MGP_LPJ_G0033706.1 mouse_genomes_project 8 77501869 77865972 + MGP_LPJ_P0089241 Nr3c2 protein_coding nonsense_mediated_decay MGP_LPJ_T0089242.1 MGP_LPJ_G0033706.1 mouse_genomes_project 8 77501869 77867984 + MGP_LPJ_P0089242 Nr3c2 protein_coding protein_coding MGP_LPJ_T0089243.1 MGP_LPJ_G0033706.1 mouse_genomes_project 8 77501928 77508235 + MGP_LPJ_P0089243 Nr3c2 protein_coding protein_coding MGP_LPJ_T0089244.1 MGP_LPJ_G0033706.1 mouse_genomes_project 8 77502057 77866640 + MGP_LPJ_P0089244 Nr3c2 protein_coding protein_coding MGP_LPJ_T0089245.1 MGP_LPJ_G0033706.1 mouse_genomes_project 8 77507850 77865506 + MGP_LPJ_P0089245 Nr3c2 protein_coding protein_coding MGP_LPJ_T0089246.1 MGP_LPJ_G0033706.1 mouse_genomes_project 8 77758529 77809283 + Nr3c2 protein_coding processed_transcript MGP_LPJ_T0009161.1 MGP_LPJ_G0007366.1 mouse_genomes_project 8 89213270 89289876 - lincRNA lincRNA MGP_LPJ_T0087813.1 MGP_LPJ_G0033247.1 mouse_genomes_project 8 1163168 1164795 - MGP_LPJ_P0087813 Ctxn1 protein_coding protein_coding MGP_LPJ_T0090195.1 MGP_LPJ_G0034025.1 mouse_genomes_project 8 112965852 112995455 - MGP_LPJ_P0090195 Calb2 protein_coding protein_coding MGP_LPJ_T0098320.1 MGP_LPJ_G0036601.1 mouse_genomes_project 8 54518024 54518143 + n-R5s98 rRNA rRNA MGP_LPJ_T0009134.1 MGP_LPJ_G0007347.1 mouse_genomes_project 8 81840959 81867014 + lincRNA lincRNA MGP_LPJ_T0089933.1 MGP_LPJ_G0033923.1 mouse_genomes_project 8 107080327 107096855 + MGP_LPJ_P0089933 Ces2a protein_coding protein_coding MGP_LPJ_T0089934.1 MGP_LPJ_G0033923.1 mouse_genomes_project 8 107080342 107096859 + MGP_LPJ_P0089934 Ces2a protein_coding protein_coding MGP_LPJ_T0089935.1 MGP_LPJ_G0033923.1 mouse_genomes_project 8 107080352 107089301 + Ces2a protein_coding processed_transcript MGP_LPJ_T0089936.1 MGP_LPJ_G0033923.1 mouse_genomes_project 8 107091383 107096469 + Ces2a protein_coding retained_intron MGP_LPJ_T0090063.1 MGP_LPJ_G0033977.1 mouse_genomes_project 8 108529614 108536322 - MGP_LPJ_P0090063 Dpep2 protein_coding protein_coding MGP_LPJ_T0090064.1 MGP_LPJ_G0033977.1 mouse_genomes_project 8 108529615 108541823 - MGP_LPJ_P0090064 Dpep2 protein_coding protein_coding MGP_LPJ_T0090065.1 MGP_LPJ_G0033977.1 mouse_genomes_project 8 108529620 108536332 - MGP_LPJ_P0090065 Dpep2 protein_coding protein_coding MGP_LPJ_T0090066.1 MGP_LPJ_G0033977.1 mouse_genomes_project 8 108532417 108536295 - Dpep2 protein_coding retained_intron MGP_LPJ_T0090067.1 MGP_LPJ_G0033977.1 mouse_genomes_project 8 108533169 108536323 - Dpep2 protein_coding retained_intron MGP_LPJ_T0090098.1 MGP_LPJ_G0033988.1 mouse_genomes_project 8 109053616 109061232 + MGP_LPJ_P0090098 6030452D12Rik protein_coding protein_coding MGP_LPJ_T0099766.1 MGP_LPJ_G0038029.1 mouse_genomes_project 8 53070614 53070676 + Gm22841 snRNA snRNA MGP_LPJ_T0009108.1 MGP_LPJ_G0007323.1 mouse_genomes_project 8 32692529 32701879 + Gm29243 lincRNA lincRNA MGP_LPJ_T0015924.1 MGP_LPJ_G0014015.1 mouse_genomes_project 8 34988058 34994375 - processed_pseudogene processed_pseudogene MGP_LPJ_T0090686.1 MGP_LPJ_G0034165.1 mouse_genomes_project 8 127637481 127658036 - MGP_LPJ_P0090686 Ccsap protein_coding protein_coding MGP_LPJ_T0090687.1 MGP_LPJ_G0034165.1 mouse_genomes_project 8 127637494 127658715 - MGP_LPJ_P0090687 Ccsap protein_coding protein_coding MGP_LPJ_T0088878.1 MGP_LPJ_G0033600.1 mouse_genomes_project 8 70427879 70435588 + MGP_LPJ_P0088878 protein_coding protein_coding MGP_LPJ_T0088879.1 MGP_LPJ_G0033600.1 mouse_genomes_project 8 70428081 70433874 + protein_coding retained_intron MGP_LPJ_T0088880.1 MGP_LPJ_G0033600.1 mouse_genomes_project 8 70428085 70455381 + MGP_LPJ_P0088880 protein_coding protein_coding MGP_LPJ_T0088881.1 MGP_LPJ_G0033600.1 mouse_genomes_project 8 70428087 70433888 + MGP_LPJ_P0088881 protein_coding nonsense_mediated_decay MGP_LPJ_T0088882.1 MGP_LPJ_G0033600.1 mouse_genomes_project 8 70428097 70435593 + MGP_LPJ_P0088882 protein_coding nonsense_mediated_decay MGP_LPJ_T0088883.1 MGP_LPJ_G0033600.1 mouse_genomes_project 8 70428651 70435651 + MGP_LPJ_P0088883 protein_coding protein_coding MGP_LPJ_T0089904.1 MGP_LPJ_G0033910.1 mouse_genomes_project 8 106606097 106624196 - MGP_LPJ_P0089904 protein_coding protein_coding MGP_LPJ_T0088068.1 MGP_LPJ_G0033326.1 mouse_genomes_project 8 16666804 16669589 + MGP_LPJ_P0088068 Defb34 protein_coding protein_coding MGP_LPJ_T0090302.1 MGP_LPJ_G0034057.1 mouse_genomes_project 8 115593478 115897715 + Cntnap4 protein_coding retained_intron MGP_LPJ_T0090303.1 MGP_LPJ_G0034057.1 mouse_genomes_project 8 115593478 115920901 + MGP_LPJ_P0090303 Cntnap4 protein_coding protein_coding MGP_LPJ_T0090304.1 MGP_LPJ_G0034057.1 mouse_genomes_project 8 115593478 115920889 + MGP_LPJ_P0090304 Cntnap4 protein_coding protein_coding MGP_LPJ_T0090305.1 MGP_LPJ_G0034057.1 mouse_genomes_project 8 115593490 115831365 + Cntnap4 protein_coding retained_intron MGP_LPJ_T0090306.1 MGP_LPJ_G0034057.1 mouse_genomes_project 8 115764844 115773459 + Cntnap4 protein_coding processed_transcript MGP_LPJ_T0090307.1 MGP_LPJ_G0034057.1 mouse_genomes_project 8 115817295 115835838 + Cntnap4 protein_coding processed_transcript MGP_LPJ_T0088409.1 MGP_LPJ_G0033460.1 mouse_genomes_project 8 39135904 39208610 + MGP_LPJ_P0088409 Micu3 protein_coding protein_coding MGP_LPJ_T0088410.1 MGP_LPJ_G0033460.1 mouse_genomes_project 8 39136604 39206129 + MGP_LPJ_P0088410 Micu3 protein_coding protein_coding MGP_LPJ_T0088411.1 MGP_LPJ_G0033460.1 mouse_genomes_project 8 39187530 39199551 + Micu3 protein_coding retained_intron MGP_LPJ_T0087873.1 MGP_LPJ_G0033269.1 mouse_genomes_project 8 8647953 8690616 - MGP_LPJ_P0087873 Cars2 protein_coding protein_coding MGP_LPJ_T0087874.1 MGP_LPJ_G0033269.1 mouse_genomes_project 8 8647955 8690522 - MGP_LPJ_P0087874 Cars2 protein_coding unknown_likely_coding MGP_LPJ_T0090201.1 MGP_LPJ_G0034029.1 mouse_genomes_project 8 113592431 113614810 + MGP_LPJ_P0090201 Mtss1l protein_coding protein_coding MGP_LPJ_T0090202.1 MGP_LPJ_G0034029.1 mouse_genomes_project 8 113592677 113612487 + MGP_LPJ_P0090202 Mtss1l protein_coding protein_coding MGP_LPJ_T0090203.1 MGP_LPJ_G0034029.1 mouse_genomes_project 8 113598272 113605420 + Mtss1l protein_coding processed_transcript MGP_LPJ_T0090204.1 MGP_LPJ_G0034029.1 mouse_genomes_project 8 113599201 113611063 + MGP_LPJ_P0090204 Mtss1l protein_coding protein_coding MGP_LPJ_T0090205.1 MGP_LPJ_G0034029.1 mouse_genomes_project 8 113599212 113611483 + MGP_LPJ_P0090205 Mtss1l protein_coding protein_coding MGP_LPJ_T0090206.1 MGP_LPJ_G0034029.1 mouse_genomes_project 8 113610526 113611791 + Mtss1l protein_coding retained_intron MGP_LPJ_T0088761.1 MGP_LPJ_G0033560.1 mouse_genomes_project 8 66629605 66631626 + MGP_LPJ_P0088761 Tktl2 protein_coding protein_coding MGP_LPJ_T0088762.1 MGP_LPJ_G0033560.1 mouse_genomes_project 8 66629608 66636172 + MGP_LPJ_P0088762 Tktl2 protein_coding protein_coding MGP_LPJ_T0010994.1 MGP_LPJ_G0009112.1 mouse_genomes_project 8 72016204 72016264 - Mir6769b miRNA miRNA MGP_LPJ_T0088123.1 MGP_LPJ_G0033366.1 mouse_genomes_project 8 20513281 20562115 - MGP_LPJ_P0088123 Ikbkb protein_coding protein_coding MGP_LPJ_T0088124.1 MGP_LPJ_G0033366.1 mouse_genomes_project 8 20513282 20562077 - MGP_LPJ_P0088124 Ikbkb protein_coding nonsense_mediated_decay MGP_LPJ_T0088125.1 MGP_LPJ_G0033366.1 mouse_genomes_project 8 20513282 20562071 - MGP_LPJ_P0088125 Ikbkb protein_coding nonsense_mediated_decay MGP_LPJ_T0088126.1 MGP_LPJ_G0033366.1 mouse_genomes_project 8 20513837 20562126 - MGP_LPJ_P0088126 Ikbkb protein_coding protein_coding MGP_LPJ_T0088127.1 MGP_LPJ_G0033366.1 mouse_genomes_project 8 20514177 20515552 - MGP_LPJ_P0088127 Ikbkb protein_coding protein_coding MGP_LPJ_T0088128.1 MGP_LPJ_G0033366.1 mouse_genomes_project 8 20514426 20562115 - Ikbkb protein_coding retained_intron MGP_LPJ_T0088129.1 MGP_LPJ_G0033366.1 mouse_genomes_project 8 20522077 20523093 - Ikbkb protein_coding retained_intron MGP_LPJ_T0088130.1 MGP_LPJ_G0033366.1 mouse_genomes_project 8 20530050 20562077 - Ikbkb protein_coding retained_intron MGP_LPJ_T0088131.1 MGP_LPJ_G0033366.1 mouse_genomes_project 8 20535278 20562076 - Ikbkb protein_coding retained_intron MGP_LPJ_T0088132.1 MGP_LPJ_G0033366.1 mouse_genomes_project 8 20536834 20548220 - MGP_LPJ_P0088132 Ikbkb protein_coding protein_coding MGP_LPJ_T0088133.1 MGP_LPJ_G0033366.1 mouse_genomes_project 8 20543278 20562096 - Ikbkb protein_coding retained_intron MGP_LPJ_T0088134.1 MGP_LPJ_G0033366.1 mouse_genomes_project 8 20545994 20562111 - Ikbkb protein_coding retained_intron MGP_LPJ_T0088135.1 MGP_LPJ_G0033366.1 mouse_genomes_project 8 20557548 20562100 - Ikbkb protein_coding retained_intron MGP_LPJ_T0088136.1 MGP_LPJ_G0033366.1 mouse_genomes_project 8 20557992 20562062 - Ikbkb protein_coding processed_transcript MGP_LPJ_T0089235.1 MGP_LPJ_G0033704.1 mouse_genomes_project 8 75797455 75807667 + MGP_LPJ_P0089235 Rasd2 protein_coding protein_coding MGP_LPJ_T0089236.1 MGP_LPJ_G0033704.1 mouse_genomes_project 8 75798013 75805917 + MGP_LPJ_P0089236 Rasd2 protein_coding protein_coding MGP_LPJ_T0089948.1 MGP_LPJ_G0033931.1 mouse_genomes_project 8 107452080 107472708 + MGP_LPJ_P0089948 protein_coding protein_coding MGP_LPJ_T0089949.1 MGP_LPJ_G0033931.1 mouse_genomes_project 8 107458189 107471924 + MGP_LPJ_P0089949 protein_coding nonsense_mediated_decay MGP_LPJ_T0090354.1 MGP_LPJ_G0034076.1 mouse_genomes_project 8 120534644 120774965 + MGP_LPJ_P0090354 Cmip protein_coding protein_coding MGP_LPJ_T0090355.1 MGP_LPJ_G0034076.1 mouse_genomes_project 8 120654904 120774965 + MGP_LPJ_P0090355 Cmip protein_coding protein_coding MGP_LPJ_T0089833.1 MGP_LPJ_G0033884.1 mouse_genomes_project 8 96613735 96641675 + MGP_LPJ_P0089833 Adgrg3 protein_coding protein_coding MGP_LPJ_T0015968.1 MGP_LPJ_G0014059.1 mouse_genomes_project 8 125221713 125222139 + processed_pseudogene processed_pseudogene MGP_LPJ_T0089293.1 MGP_LPJ_G0033722.1 mouse_genomes_project 8 80480026 80548600 + MGP_LPJ_P0089293 Anapc10 protein_coding protein_coding MGP_LPJ_T0101016.1 MGP_LPJ_G0039279.1 mouse_genomes_project 8 22670680 22670804 + Gm26208 snoRNA snoRNA MGP_LPJ_T0015963.1 MGP_LPJ_G0014054.1 mouse_genomes_project 8 107223837 107224862 - processed_pseudogene processed_pseudogene MGP_LPJ_T0089803.1 MGP_LPJ_G0033876.1 mouse_genomes_project 8 96394951 96396534 + MGP_LPJ_P0089803 Ccl17 protein_coding protein_coding MGP_LPJ_T0089067.1 MGP_LPJ_G0033649.1 mouse_genomes_project 8 71741455 71749234 - Nr2f6 protein_coding processed_transcript MGP_LPJ_T0089068.1 MGP_LPJ_G0033649.1 mouse_genomes_project 8 71741459 71749288 - MGP_LPJ_P0089068 Nr2f6 protein_coding protein_coding MGP_LPJ_T0089069.1 MGP_LPJ_G0033649.1 mouse_genomes_project 8 71741966 71743129 - Nr2f6 protein_coding processed_transcript MGP_LPJ_T0089070.1 MGP_LPJ_G0033649.1 mouse_genomes_project 8 71741991 71743129 - Nr2f6 protein_coding processed_transcript MGP_LPJ_T0089071.1 MGP_LPJ_G0033649.1 mouse_genomes_project 8 71742456 71743129 - Nr2f6 protein_coding processed_transcript MGP_LPJ_T0089072.1 MGP_LPJ_G0033649.1 mouse_genomes_project 8 71743090 71748237 - Nr2f6 protein_coding processed_transcript MGP_LPJ_T0089073.1 MGP_LPJ_G0033649.1 mouse_genomes_project 8 71743090 71748418 - MGP_LPJ_P0089073 Nr2f6 protein_coding protein_coding MGP_LPJ_T0089074.1 MGP_LPJ_G0033649.1 mouse_genomes_project 8 71743157 71748505 - MGP_LPJ_P0089074 Nr2f6 protein_coding protein_coding MGP_LPJ_T0010999.1 MGP_LPJ_G0009117.1 mouse_genomes_project 8 84903016 84903130 - Gm44450 miRNA miRNA MGP_LPJ_T0005387.1 MGP_LPJ_G0004566.1 mouse_genomes_project 8 66496979 66499892 - Gm15354 antisense antisense MGP_LPJ_T0089112.1 MGP_LPJ_G0033664.1 mouse_genomes_project 8 71975702 71987148 + MGP_LPJ_P0089112 Pgls protein_coding nonsense_mediated_decay MGP_LPJ_T0089113.1 MGP_LPJ_G0033664.1 mouse_genomes_project 8 71975729 71981052 + Pgls protein_coding retained_intron MGP_LPJ_T0089114.1 MGP_LPJ_G0033664.1 mouse_genomes_project 8 71975735 71981655 + MGP_LPJ_P0089114 Pgls protein_coding protein_coding MGP_LPJ_T0089115.1 MGP_LPJ_G0033664.1 mouse_genomes_project 8 71975755 71980492 + MGP_LPJ_P0089115 Pgls protein_coding protein_coding MGP_LPJ_T0098676.1 MGP_LPJ_G0036945.1 mouse_genomes_project 8 32329521 32330493 - Gm26978 sense_intronic sense_intronic MGP_LPJ_T0015954.1 MGP_LPJ_G0014045.1 mouse_genomes_project 8 85886426 85886810 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011722.1 MGP_LPJ_G0009840.1 mouse_genomes_project 8 1012991 1013244 - Gm23888 misc_RNA misc_RNA MGP_LPJ_T0011014.1 MGP_LPJ_G0009132.1 mouse_genomes_project 8 86772534 86772651 + Mir8109 miRNA miRNA MGP_LPJ_T0088072.1 MGP_LPJ_G0033329.1 mouse_genomes_project 8 16726594 16727450 + MGP_LPJ_P0088072 Defb14 protein_coding protein_coding MGP_LPJ_T0090055.1 MGP_LPJ_G0033973.1 mouse_genomes_project 8 108475559 108478224 - MGP_LPJ_P0090055 Psmb10 protein_coding protein_coding MGP_LPJ_T0090134.1 MGP_LPJ_G0034003.1 mouse_genomes_project 8 109927611 109969373 + Nfat5 protein_coding retained_intron MGP_LPJ_T0090135.1 MGP_LPJ_G0034003.1 mouse_genomes_project 8 109927611 110013142 + MGP_LPJ_P0090135 Nfat5 protein_coding nonsense_mediated_decay MGP_LPJ_T0090136.1 MGP_LPJ_G0034003.1 mouse_genomes_project 8 109927650 109968068 + Nfat5 protein_coding retained_intron MGP_LPJ_T0090137.1 MGP_LPJ_G0034003.1 mouse_genomes_project 8 109927700 110013093 + MGP_LPJ_P0090137 Nfat5 protein_coding protein_coding MGP_LPJ_T0090138.1 MGP_LPJ_G0034003.1 mouse_genomes_project 8 109927700 110020572 + MGP_LPJ_P0090138 Nfat5 protein_coding protein_coding MGP_LPJ_T0090139.1 MGP_LPJ_G0034003.1 mouse_genomes_project 8 109927967 109979922 + MGP_LPJ_P0090139 Nfat5 protein_coding unknown_likely_coding MGP_LPJ_T0090140.1 MGP_LPJ_G0034003.1 mouse_genomes_project 8 109927967 110013989 + MGP_LPJ_P0090140 Nfat5 protein_coding protein_coding MGP_LPJ_T0090141.1 MGP_LPJ_G0034003.1 mouse_genomes_project 8 109979840 109996613 + Nfat5 protein_coding retained_intron MGP_LPJ_T0090142.1 MGP_LPJ_G0034003.1 mouse_genomes_project 8 109979840 110008320 + Nfat5 protein_coding retained_intron MGP_LPJ_T0090143.1 MGP_LPJ_G0034003.1 mouse_genomes_project 8 109980245 110011574 + MGP_LPJ_P0090143 Nfat5 protein_coding protein_coding MGP_LPJ_T0090144.1 MGP_LPJ_G0034003.1 mouse_genomes_project 8 109985768 110002684 + MGP_LPJ_P0090144 Nfat5 protein_coding nonsense_mediated_decay MGP_LPJ_T0090145.1 MGP_LPJ_G0034003.1 mouse_genomes_project 8 109996692 110014445 + MGP_LPJ_P0090145 Nfat5 protein_coding protein_coding MGP_LPJ_T0089202.1 MGP_LPJ_G0033693.1 mouse_genomes_project 8 73152992 73158716 - MGP_LPJ_P0089202 Smim7 protein_coding protein_coding MGP_LPJ_T0089203.1 MGP_LPJ_G0033693.1 mouse_genomes_project 8 73155295 73158677 - MGP_LPJ_P0089203 Smim7 protein_coding protein_coding MGP_LPJ_T0089204.1 MGP_LPJ_G0033693.1 mouse_genomes_project 8 73158215 73158690 - Smim7 protein_coding retained_intron MGP_LPJ_T0087957.1 MGP_LPJ_G0033289.1 mouse_genomes_project 8 10467647 10498347 - MGP_LPJ_P0087957 protein_coding protein_coding MGP_LPJ_T0087958.1 MGP_LPJ_G0033289.1 mouse_genomes_project 8 10481639 10498347 - MGP_LPJ_P0087958 protein_coding protein_coding MGP_LPJ_T0087959.1 MGP_LPJ_G0033289.1 mouse_genomes_project 8 10486421 10487244 - protein_coding retained_intron MGP_LPJ_T0087960.1 MGP_LPJ_G0033289.1 mouse_genomes_project 8 10486669 10498256 - MGP_LPJ_P0087960 protein_coding protein_coding MGP_LPJ_T0087961.1 MGP_LPJ_G0033289.1 mouse_genomes_project 8 10486801 10498281 - MGP_LPJ_P0087961 protein_coding protein_coding MGP_LPJ_T0098321.1 MGP_LPJ_G0036602.1 mouse_genomes_project 8 64193891 64194012 + Gm22586 rRNA rRNA MGP_LPJ_T0101037.1 MGP_LPJ_G0039300.1 mouse_genomes_project 8 67051450 67051579 - Gm25275 snoRNA snoRNA MGP_LPJ_T0090287.1 MGP_LPJ_G0034047.1 mouse_genomes_project 8 114596517 114625347 + MGP_LPJ_P0090287 Zfp1 protein_coding protein_coding MGP_LPJ_T0088441.1 MGP_LPJ_G0033467.1 mouse_genomes_project 8 39798935 39812362 + Pdgfrl protein_coding retained_intron MGP_LPJ_T0088442.1 MGP_LPJ_G0033467.1 mouse_genomes_project 8 39798951 39864787 + MGP_LPJ_P0088442 Pdgfrl protein_coding protein_coding MGP_LPJ_T0088831.1 MGP_LPJ_G0033583.1 mouse_genomes_project 8 70039890 70053202 - MGP_LPJ_P0088831 Zfp866 protein_coding protein_coding MGP_LPJ_T0089063.1 MGP_LPJ_G0033648.1 mouse_genomes_project 8 71738613 71741721 + MGP_LPJ_P0089063 Ocel1 protein_coding protein_coding MGP_LPJ_T0089064.1 MGP_LPJ_G0033648.1 mouse_genomes_project 8 71738654 71741022 + MGP_LPJ_P0089064 Ocel1 protein_coding protein_coding MGP_LPJ_T0089065.1 MGP_LPJ_G0033648.1 mouse_genomes_project 8 71738661 71746700 + MGP_LPJ_P0089065 Ocel1 protein_coding protein_coding MGP_LPJ_T0089066.1 MGP_LPJ_G0033648.1 mouse_genomes_project 8 71739805 71740288 + Ocel1 protein_coding retained_intron MGP_LPJ_T0015962.1 MGP_LPJ_G0014053.1 mouse_genomes_project 8 101944514 101945001 + processed_pseudogene processed_pseudogene MGP_LPJ_T0015922.1 MGP_LPJ_G0014013.1 mouse_genomes_project 8 34631141 34631508 + processed_pseudogene processed_pseudogene MGP_LPJ_T0089630.1 MGP_LPJ_G0033820.1 mouse_genomes_project 8 88707035 88733025 + MGP_LPJ_P0089630 4933402J07Rik protein_coding protein_coding MGP_LPJ_T0088283.1 MGP_LPJ_G0033407.1 mouse_genomes_project 8 25109544 25113670 + MGP_LPJ_P0088283 Zfp703 protein_coding protein_coding MGP_LPJ_T0088284.1 MGP_LPJ_G0033407.1 mouse_genomes_project 8 25109544 25113670 + MGP_LPJ_P0088284 Zfp703 protein_coding protein_coding MGP_LPJ_T0090020.1 MGP_LPJ_G0033956.1 mouse_genomes_project 8 108111000 108127966 + MGP_LPJ_P0090020 Fam65a protein_coding protein_coding MGP_LPJ_T0089585.1 MGP_LPJ_G0033806.1 mouse_genomes_project 8 86336907 86346427 + MGP_LPJ_P0089585 Orc6 protein_coding protein_coding MGP_LPJ_T0089586.1 MGP_LPJ_G0033806.1 mouse_genomes_project 8 86336907 86346427 + MGP_LPJ_P0089586 Orc6 protein_coding protein_coding MGP_LPJ_T0101024.1 MGP_LPJ_G0039287.1 mouse_genomes_project 8 42379239 42379369 + Gm22986 snoRNA snoRNA MGP_LPJ_T0099790.1 MGP_LPJ_G0038053.1 mouse_genomes_project 8 114862145 114862249 + Gm23853 snRNA snRNA MGP_LPJ_T0088120.1 MGP_LPJ_G0033363.1 mouse_genomes_project 8 20426081 20443951 - MGP_LPJ_P0088120 protein_coding protein_coding MGP_LPJ_T0005354.1 MGP_LPJ_G0004541.1 mouse_genomes_project 8 10089589 10106651 - Gm15347 antisense antisense MGP_LPJ_T0005382.1 MGP_LPJ_G0004562.1 mouse_genomes_project 8 57050397 57054697 - Gm28063 antisense antisense MGP_LPJ_T0005383.1 MGP_LPJ_G0004562.1 mouse_genomes_project 8 57050415 57054697 - Gm28063 antisense antisense MGP_LPJ_T0088799.1 MGP_LPJ_G0033572.1 mouse_genomes_project 8 69290954 69368795 - MGP_LPJ_P0088799 Slc18a1 protein_coding protein_coding MGP_LPJ_T0088800.1 MGP_LPJ_G0033572.1 mouse_genomes_project 8 69344812 69356678 - Slc18a1 protein_coding retained_intron MGP_LPJ_T0088801.1 MGP_LPJ_G0033572.1 mouse_genomes_project 8 69349873 69354955 - Slc18a1 protein_coding retained_intron MGP_LPJ_T0088802.1 MGP_LPJ_G0033572.1 mouse_genomes_project 8 69354547 69368808 - Slc18a1 protein_coding processed_transcript MGP_LPJ_T0088803.1 MGP_LPJ_G0033572.1 mouse_genomes_project 8 69354615 69368782 - Slc18a1 protein_coding processed_transcript MGP_LPJ_T0090414.1 MGP_LPJ_G0034099.1 mouse_genomes_project 8 123501677 123564386 + MGP_LPJ_P0090414 Crispld2 protein_coding protein_coding MGP_LPJ_T0090415.1 MGP_LPJ_G0034099.1 mouse_genomes_project 8 123501747 123563177 + MGP_LPJ_P0090415 Crispld2 protein_coding protein_coding MGP_LPJ_T0090416.1 MGP_LPJ_G0034099.1 mouse_genomes_project 8 123513312 123563177 + MGP_LPJ_P0090416 Crispld2 protein_coding protein_coding MGP_LPJ_T0090417.1 MGP_LPJ_G0034099.1 mouse_genomes_project 8 123524489 123526973 + Crispld2 protein_coding processed_transcript MGP_LPJ_T0090418.1 MGP_LPJ_G0034099.1 mouse_genomes_project 8 123542387 123562072 + Crispld2 protein_coding retained_intron MGP_LPJ_T0088680.1 MGP_LPJ_G0033540.1 mouse_genomes_project 8 60762491 60808263 - MGP_LPJ_P0088680 Clcn3 protein_coding protein_coding MGP_LPJ_T0088681.1 MGP_LPJ_G0033540.1 mouse_genomes_project 8 60762968 60775071 - Clcn3 protein_coding processed_transcript MGP_LPJ_T0088682.1 MGP_LPJ_G0033540.1 mouse_genomes_project 8 60764004 60808390 - MGP_LPJ_P0088682 Clcn3 protein_coding protein_coding MGP_LPJ_T0088683.1 MGP_LPJ_G0033540.1 mouse_genomes_project 8 60764031 60808875 - Clcn3 protein_coding retained_intron MGP_LPJ_T0088684.1 MGP_LPJ_G0033540.1 mouse_genomes_project 8 60764031 60841391 - MGP_LPJ_P0088684 Clcn3 protein_coding protein_coding MGP_LPJ_T0088685.1 MGP_LPJ_G0033540.1 mouse_genomes_project 8 60764031 60841391 - MGP_LPJ_P0088685 Clcn3 protein_coding protein_coding MGP_LPJ_T0088686.1 MGP_LPJ_G0033540.1 mouse_genomes_project 8 60780395 60808421 - Clcn3 protein_coding retained_intron MGP_LPJ_T0088687.1 MGP_LPJ_G0033540.1 mouse_genomes_project 8 60787390 60841396 - Clcn3 protein_coding retained_intron MGP_LPJ_T0088688.1 MGP_LPJ_G0033540.1 mouse_genomes_project 8 60790514 60841438 - Clcn3 protein_coding retained_intron MGP_LPJ_T0015958.1 MGP_LPJ_G0014049.1 mouse_genomes_project 8 90432806 90433421 - processed_pseudogene processed_pseudogene MGP_LPJ_T0089569.1 MGP_LPJ_G0033800.1 mouse_genomes_project 8 86132089 86137697 - Wdr83 protein_coding retained_intron MGP_LPJ_T0089570.1 MGP_LPJ_G0033800.1 mouse_genomes_project 8 86132089 86137626 - Wdr83 protein_coding retained_intron MGP_LPJ_T0089571.1 MGP_LPJ_G0033800.1 mouse_genomes_project 8 86132089 86137740 - MGP_LPJ_P0089571 Wdr83 protein_coding protein_coding MGP_LPJ_T0089572.1 MGP_LPJ_G0033800.1 mouse_genomes_project 8 86132090 86136909 - Wdr83 protein_coding retained_intron MGP_LPJ_T0089573.1 MGP_LPJ_G0033800.1 mouse_genomes_project 8 86132091 86133162 - MGP_LPJ_P0089573 Wdr83 protein_coding protein_coding MGP_LPJ_T0089574.1 MGP_LPJ_G0033800.1 mouse_genomes_project 8 86132092 86133346 - Wdr83 protein_coding retained_intron MGP_LPJ_T0089575.1 MGP_LPJ_G0033800.1 mouse_genomes_project 8 86132106 86138297 - Wdr83 protein_coding retained_intron MGP_LPJ_T0089576.1 MGP_LPJ_G0033800.1 mouse_genomes_project 8 86132882 86137667 - MGP_LPJ_P0089576 Wdr83 protein_coding protein_coding MGP_LPJ_T0089577.1 MGP_LPJ_G0033800.1 mouse_genomes_project 8 86133178 86137668 - MGP_LPJ_P0089577 Wdr83 protein_coding nonsense_mediated_decay MGP_LPJ_T0089578.1 MGP_LPJ_G0033800.1 mouse_genomes_project 8 86136688 86137663 - Wdr83 protein_coding retained_intron MGP_LPJ_T0090403.1 MGP_LPJ_G0034098.1 mouse_genomes_project 8 123410689 123463123 + MGP_LPJ_P0090403 Usp10 protein_coding protein_coding MGP_LPJ_T0090404.1 MGP_LPJ_G0034098.1 mouse_genomes_project 8 123411143 123463128 + MGP_LPJ_P0090404 Usp10 protein_coding protein_coding MGP_LPJ_T0090405.1 MGP_LPJ_G0034098.1 mouse_genomes_project 8 123411162 123458195 + Usp10 protein_coding processed_transcript MGP_LPJ_T0090406.1 MGP_LPJ_G0034098.1 mouse_genomes_project 8 123411186 123457502 + MGP_LPJ_P0090406 Usp10 protein_coding protein_coding MGP_LPJ_T0090407.1 MGP_LPJ_G0034098.1 mouse_genomes_project 8 123448267 123452908 + Usp10 protein_coding processed_transcript MGP_LPJ_T0090408.1 MGP_LPJ_G0034098.1 mouse_genomes_project 8 123452492 123458859 + Usp10 protein_coding retained_intron MGP_LPJ_T0090409.1 MGP_LPJ_G0034098.1 mouse_genomes_project 8 123452603 123457971 + Usp10 protein_coding retained_intron MGP_LPJ_T0090410.1 MGP_LPJ_G0034098.1 mouse_genomes_project 8 123457530 123460885 + Usp10 protein_coding retained_intron MGP_LPJ_T0090411.1 MGP_LPJ_G0034098.1 mouse_genomes_project 8 123458219 123460379 + Usp10 protein_coding retained_intron MGP_LPJ_T0090412.1 MGP_LPJ_G0034098.1 mouse_genomes_project 8 123458842 123462437 + MGP_LPJ_P0090412 Usp10 protein_coding protein_coding MGP_LPJ_T0090413.1 MGP_LPJ_G0034098.1 mouse_genomes_project 8 123461773 123463125 + Usp10 protein_coding processed_transcript MGP_LPJ_T0015937.1 MGP_LPJ_G0014028.1 mouse_genomes_project 8 72384360 72396517 + processed_pseudogene processed_pseudogene MGP_LPJ_T0088075.1 MGP_LPJ_G0033332.1 mouse_genomes_project 8 16773643 16775861 + MGP_LPJ_P0088075 Defb46 protein_coding protein_coding MGP_LPJ_T0089523.1 MGP_LPJ_G0033788.1 mouse_genomes_project 8 85991448 86000959 + MGP_LPJ_P0089523 Rtbdn protein_coding protein_coding MGP_LPJ_T0089524.1 MGP_LPJ_G0033788.1 mouse_genomes_project 8 85991448 86000959 + MGP_LPJ_P0089524 Rtbdn protein_coding protein_coding MGP_LPJ_T0089525.1 MGP_LPJ_G0033788.1 mouse_genomes_project 8 85994217 86000959 + MGP_LPJ_P0089525 Rtbdn protein_coding protein_coding MGP_LPJ_T0089526.1 MGP_LPJ_G0033788.1 mouse_genomes_project 8 85995531 86000867 + MGP_LPJ_P0089526 Rtbdn protein_coding protein_coding MGP_LPJ_T0090729.1 MGP_LPJ_G0034181.1 mouse_genomes_project 8 128710878 128732196 - MGP_LPJ_P0090729 2810004N23Rik protein_coding protein_coding MGP_LPJ_T0088391.1 MGP_LPJ_G0033454.1 mouse_genomes_project 8 35210323 35386173 - MGP_LPJ_P0088391 Dlc1 protein_coding protein_coding MGP_LPJ_T0088392.1 MGP_LPJ_G0033454.1 mouse_genomes_project 8 35210323 35261526 - MGP_LPJ_P0088392 Dlc1 protein_coding protein_coding MGP_LPJ_T0088393.1 MGP_LPJ_G0033454.1 mouse_genomes_project 8 35212803 35608621 - MGP_LPJ_P0088393 Dlc1 protein_coding protein_coding MGP_LPJ_T0088394.1 MGP_LPJ_G0033454.1 mouse_genomes_project 8 35214760 35219732 - Dlc1 protein_coding retained_intron MGP_LPJ_T0088395.1 MGP_LPJ_G0033454.1 mouse_genomes_project 8 35235496 35261457 - Dlc1 protein_coding retained_intron MGP_LPJ_T0088396.1 MGP_LPJ_G0033454.1 mouse_genomes_project 8 35496507 35608536 - Dlc1 protein_coding retained_intron MGP_LPJ_T0088397.1 MGP_LPJ_G0033454.1 mouse_genomes_project 8 35505441 35608601 - Dlc1 protein_coding retained_intron MGP_LPJ_T0088398.1 MGP_LPJ_G0033454.1 mouse_genomes_project 8 35590093 35608615 - Dlc1 protein_coding retained_intron MGP_LPJ_T0088399.1 MGP_LPJ_G0033454.1 mouse_genomes_project 8 35593064 35609321 - MGP_LPJ_P0088399 Dlc1 protein_coding protein_coding MGP_LPJ_T0088936.1 MGP_LPJ_G0033608.1 mouse_genomes_project 8 70591569 70602016 + MGP_LPJ_P0088936 Cope protein_coding protein_coding MGP_LPJ_T0088937.1 MGP_LPJ_G0033608.1 mouse_genomes_project 8 70591792 70595473 + Cope protein_coding retained_intron MGP_LPJ_T0088938.1 MGP_LPJ_G0033608.1 mouse_genomes_project 8 70591820 70602019 + Cope protein_coding retained_intron MGP_LPJ_T0088939.1 MGP_LPJ_G0033608.1 mouse_genomes_project 8 70591824 70599518 + MGP_LPJ_P0088939 Cope protein_coding protein_coding MGP_LPJ_T0088940.1 MGP_LPJ_G0033608.1 mouse_genomes_project 8 70591844 70595978 + Cope protein_coding retained_intron MGP_LPJ_T0088941.1 MGP_LPJ_G0033608.1 mouse_genomes_project 8 70591847 70601798 + MGP_LPJ_P0088941 Cope protein_coding nonsense_mediated_decay MGP_LPJ_T0088942.1 MGP_LPJ_G0033608.1 mouse_genomes_project 8 70594749 70602016 + MGP_LPJ_P0088942 Cope protein_coding protein_coding MGP_LPJ_T0088943.1 MGP_LPJ_G0033608.1 mouse_genomes_project 8 70597560 70602016 + MGP_LPJ_P0088943 Cope protein_coding protein_coding MGP_LPJ_T0087848.1 MGP_LPJ_G0033257.1 mouse_genomes_project 8 5642488 5645531 + MGP_LPJ_P0087848 protein_coding protein_coding MGP_LPJ_T0089184.1 MGP_LPJ_G0033683.1 mouse_genomes_project 8 72781934 72791480 - MGP_LPJ_P0089184 Cib3 protein_coding protein_coding MGP_LPJ_T0088571.1 MGP_LPJ_G0033499.1 mouse_genomes_project 8 45740814 45763012 + MGP_LPJ_P0088571 Casp3 protein_coding unknown_likely_coding MGP_LPJ_T0087844.1 MGP_LPJ_G0033254.1 mouse_genomes_project 8 1633715 1683174 - MGP_LPJ_P0087844 Shcbp1 protein_coding protein_coding MGP_LPJ_T0090207.1 MGP_LPJ_G0034030.1 mouse_genomes_project 8 113615238 113616108 - Il34 protein_coding processed_transcript MGP_LPJ_T0090208.1 MGP_LPJ_G0034030.1 mouse_genomes_project 8 113615249 113685765 - MGP_LPJ_P0090208 Il34 protein_coding protein_coding MGP_LPJ_T0090209.1 MGP_LPJ_G0034030.1 mouse_genomes_project 8 113615249 113685734 - MGP_LPJ_P0090209 Il34 protein_coding protein_coding MGP_LPJ_T0090210.1 MGP_LPJ_G0034030.1 mouse_genomes_project 8 113628680 113668281 - Il34 protein_coding processed_transcript MGP_LPJ_T0090211.1 MGP_LPJ_G0034030.1 mouse_genomes_project 8 113628969 113685786 - Il34 protein_coding processed_transcript MGP_LPJ_T0011000.1 MGP_LPJ_G0009118.1 mouse_genomes_project 8 84903261 84903404 - Gm44330 miRNA miRNA MGP_LPJ_T0089985.1 MGP_LPJ_G0033944.1 mouse_genomes_project 8 107788384 107798638 - MGP_LPJ_P0089985 protein_coding protein_coding MGP_LPJ_T0088114.1 MGP_LPJ_G0033358.1 mouse_genomes_project 8 20131418 20220346 + MGP_LPJ_P0088114 Tpte protein_coding protein_coding MGP_LPJ_T0099765.1 MGP_LPJ_G0038028.1 mouse_genomes_project 8 53070524 53070586 + Gm27964 snRNA snRNA MGP_LPJ_T0089718.1 MGP_LPJ_G0033847.1 mouse_genomes_project 8 94464554 94491439 - MGP_LPJ_P0089718 Ces1a protein_coding protein_coding MGP_LPJ_T0089674.1 MGP_LPJ_G0033831.1 mouse_genomes_project 8 90265042 90283238 - MGP_LPJ_P0089674 Sall1 protein_coding protein_coding MGP_LPJ_T0009083.1 MGP_LPJ_G0007305.1 mouse_genomes_project 8 8612208 8614505 + E230013L22Rik lincRNA lincRNA MGP_LPJ_T0088689.1 MGP_LPJ_G0033541.1 mouse_genomes_project 8 60851042 61003311 + MGP_LPJ_P0088689 Nek1 protein_coding protein_coding MGP_LPJ_T0088690.1 MGP_LPJ_G0033541.1 mouse_genomes_project 8 60851042 61003318 + MGP_LPJ_P0088690 Nek1 protein_coding protein_coding MGP_LPJ_T0088691.1 MGP_LPJ_G0033541.1 mouse_genomes_project 8 60851047 60915838 + Nek1 protein_coding retained_intron MGP_LPJ_T0088692.1 MGP_LPJ_G0033541.1 mouse_genomes_project 8 60851086 60978657 + Nek1 protein_coding retained_intron MGP_LPJ_T0088693.1 MGP_LPJ_G0033541.1 mouse_genomes_project 8 60851088 60898449 + Nek1 protein_coding retained_intron MGP_LPJ_T0088694.1 MGP_LPJ_G0033541.1 mouse_genomes_project 8 60851088 60897912 + Nek1 protein_coding retained_intron MGP_LPJ_T0088695.1 MGP_LPJ_G0033541.1 mouse_genomes_project 8 60921129 60956338 + MGP_LPJ_P0088695 Nek1 protein_coding protein_coding MGP_LPJ_T0098062.1 MGP_LPJ_G0036343.1 mouse_genomes_project 8 89309314 89309745 - pseudogene pseudogene MGP_LPJ_T0088931.1 MGP_LPJ_G0033607.1 mouse_genomes_project 8 70581927 70591541 - MGP_LPJ_P0088931 Ddx49 protein_coding protein_coding MGP_LPJ_T0088932.1 MGP_LPJ_G0033607.1 mouse_genomes_project 8 70581938 70591504 - Ddx49 protein_coding retained_intron MGP_LPJ_T0088933.1 MGP_LPJ_G0033607.1 mouse_genomes_project 8 70582647 70584798 - Ddx49 protein_coding retained_intron MGP_LPJ_T0088934.1 MGP_LPJ_G0033607.1 mouse_genomes_project 8 70583858 70591526 - MGP_LPJ_P0088934 Ddx49 protein_coding unknown_likely_coding MGP_LPJ_T0088935.1 MGP_LPJ_G0033607.1 mouse_genomes_project 8 70584880 70591515 - Ddx49 protein_coding retained_intron MGP_LPJ_T0090771.1 MGP_LPJ_G0034198.1 mouse_genomes_project 8 130965432 130980663 - MGP_LPJ_P0090771 Tomm20 protein_coding protein_coding MGP_LPJ_T0090689.1 MGP_LPJ_G0034167.1 mouse_genomes_project 8 127702242 127756147 - MGP_LPJ_P0090689 Nup133 protein_coding protein_coding MGP_LPJ_T0090642.1 MGP_LPJ_G0034153.1 mouse_genomes_project 8 126988447 127006893 + MGP_LPJ_P0090642 Zfp276 protein_coding protein_coding MGP_LPJ_T0090643.1 MGP_LPJ_G0034153.1 mouse_genomes_project 8 126988538 126991904 + Zfp276 protein_coding retained_intron MGP_LPJ_T0090644.1 MGP_LPJ_G0034153.1 mouse_genomes_project 8 126988551 127006891 + Zfp276 protein_coding retained_intron MGP_LPJ_T0090645.1 MGP_LPJ_G0034153.1 mouse_genomes_project 8 126988953 127002216 + MGP_LPJ_P0090645 Zfp276 protein_coding protein_coding MGP_LPJ_T0090646.1 MGP_LPJ_G0034153.1 mouse_genomes_project 8 126992588 127005270 + Zfp276 protein_coding retained_intron MGP_LPJ_T0090647.1 MGP_LPJ_G0034153.1 mouse_genomes_project 8 126993721 127005065 + Zfp276 protein_coding retained_intron MGP_LPJ_T0090648.1 MGP_LPJ_G0034153.1 mouse_genomes_project 8 127001966 127002789 + Zfp276 protein_coding retained_intron MGP_LPJ_T0090332.1 MGP_LPJ_G0034065.1 mouse_genomes_project 8 118863989 118888818 - MGP_LPJ_P0090332 Maf protein_coding protein_coding MGP_LPJ_T0090333.1 MGP_LPJ_G0034065.1 mouse_genomes_project 8 118883172 118889516 - MGP_LPJ_P0090333 Maf protein_coding protein_coding MGP_LPJ_T0099753.1 MGP_LPJ_G0038016.1 mouse_genomes_project 8 20681955 20682073 - Gm24735 snRNA snRNA MGP_LPJ_T0018447.1 MGP_LPJ_G0015646.1 mouse_genomes_project 8 128703221 128732870 + Gm16163 processed_transcript processed_transcript MGP_LPJ_T0015944.1 MGP_LPJ_G0014035.1 mouse_genomes_project 8 79603450 79603908 - processed_pseudogene processed_pseudogene MGP_LPJ_T0089611.1 MGP_LPJ_G0033814.1 mouse_genomes_project 8 87571725 87675679 - MGP_LPJ_P0089611 Abcc12 protein_coding nonsense_mediated_decay MGP_LPJ_T0089612.1 MGP_LPJ_G0033814.1 mouse_genomes_project 8 87594051 87675710 - MGP_LPJ_P0089612 Abcc12 protein_coding protein_coding MGP_LPJ_T0089613.1 MGP_LPJ_G0033814.1 mouse_genomes_project 8 87594055 87624069 - MGP_LPJ_P0089613 Abcc12 protein_coding nonsense_mediated_decay MGP_LPJ_T0089614.1 MGP_LPJ_G0033814.1 mouse_genomes_project 8 87594313 87658868 - MGP_LPJ_P0089614 Abcc12 protein_coding nonsense_mediated_decay MGP_LPJ_T0089615.1 MGP_LPJ_G0033814.1 mouse_genomes_project 8 87594313 87658868 - MGP_LPJ_P0089615 Abcc12 protein_coding protein_coding MGP_LPJ_T0089616.1 MGP_LPJ_G0033814.1 mouse_genomes_project 8 87594313 87658868 - MGP_LPJ_P0089616 Abcc12 protein_coding nonsense_mediated_decay MGP_LPJ_T0089617.1 MGP_LPJ_G0033814.1 mouse_genomes_project 8 87623282 87675710 - MGP_LPJ_P0089617 Abcc12 protein_coding protein_coding MGP_LPJ_T0015906.1 MGP_LPJ_G0013997.1 mouse_genomes_project 8 17074732 17075252 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010983.1 MGP_LPJ_G0009101.1 mouse_genomes_project 8 37055653 37055723 - Mir383 miRNA miRNA MGP_LPJ_T0088622.1 MGP_LPJ_G0033519.1 mouse_genomes_project 8 54164669 54174235 - MGP_LPJ_P0088622 Spcs3 protein_coding protein_coding MGP_LPJ_T0090494.1 MGP_LPJ_G0034116.1 mouse_genomes_project 8 125232254 125241031 + MGP_LPJ_P0090494 Map1lc3b protein_coding protein_coding MGP_LPJ_T0090495.1 MGP_LPJ_G0034116.1 mouse_genomes_project 8 125232370 125235003 + Map1lc3b protein_coding retained_intron MGP_LPJ_T0090496.1 MGP_LPJ_G0034116.1 mouse_genomes_project 8 125232374 125240317 + Map1lc3b protein_coding retained_intron MGP_LPJ_T0005417.1 MGP_LPJ_G0004591.1 mouse_genomes_project 8 117714001 117717611 - Gm16116 antisense antisense MGP_LPJ_T0010987.1 MGP_LPJ_G0009105.1 mouse_genomes_project 8 64555186 64555296 - Mir710 miRNA miRNA MGP_LPJ_T0089544.1 MGP_LPJ_G0033792.1 mouse_genomes_project 8 86037592 86050001 + MGP_LPJ_P0089544 Hook2 protein_coding protein_coding MGP_LPJ_T0090770.1 MGP_LPJ_G0034197.1 mouse_genomes_project 8 130571779 130579551 - MGP_LPJ_P0090770 Irf2bp2 protein_coding protein_coding MGP_LPJ_T0011051.1 MGP_LPJ_G0009169.1 mouse_genomes_project 8 132388858 132388936 - Mir21c miRNA miRNA MGP_LPJ_T0010993.1 MGP_LPJ_G0009111.1 mouse_genomes_project 8 71262142 71262236 + Mir1969 miRNA miRNA MGP_LPJ_T0101015.1 MGP_LPJ_G0039278.1 mouse_genomes_project 8 21190244 21190376 - Gm24335 snoRNA snoRNA MGP_LPJ_T0090749.1 MGP_LPJ_G0034188.1 mouse_genomes_project 8 129339929 129415495 - MGP_LPJ_P0090749 Sipa1l2 protein_coding protein_coding MGP_LPJ_T0011034.1 MGP_LPJ_G0009152.1 mouse_genomes_project 8 113917813 113917894 - Mir3473d miRNA miRNA MGP_LPJ_T0089858.1 MGP_LPJ_G0033892.1 mouse_genomes_project 8 96966758 96988863 + MGP_LPJ_P0089858 Mmp15 protein_coding protein_coding MGP_LPJ_T0088071.1 MGP_LPJ_G0033328.1 mouse_genomes_project 8 16701071 16702764 + MGP_LPJ_P0088071 Spag11a protein_coding protein_coding MGP_LPJ_T0010996.1 MGP_LPJ_G0009114.1 mouse_genomes_project 8 73570645 73570725 + Mir28b miRNA miRNA MGP_LPJ_T0009177.1 MGP_LPJ_G0007374.1 mouse_genomes_project 8 93769025 93769464 - lincRNA lincRNA MGP_LPJ_T0088533.1 MGP_LPJ_G0033491.1 mouse_genomes_project 8 45092185 45120509 + MGP_LPJ_P0088533 Lrp2bp protein_coding protein_coding MGP_LPJ_T0088534.1 MGP_LPJ_G0033491.1 mouse_genomes_project 8 45092190 45120240 + MGP_LPJ_P0088534 Lrp2bp protein_coding protein_coding MGP_LPJ_T0088535.1 MGP_LPJ_G0033491.1 mouse_genomes_project 8 45102252 45122331 + MGP_LPJ_P0088535 Lrp2bp protein_coding protein_coding MGP_LPJ_T0088536.1 MGP_LPJ_G0033491.1 mouse_genomes_project 8 45102261 45120497 + MGP_LPJ_P0088536 Lrp2bp protein_coding nonsense_mediated_decay MGP_LPJ_T0088537.1 MGP_LPJ_G0033491.1 mouse_genomes_project 8 45103400 45109790 + Lrp2bp protein_coding processed_transcript MGP_LPJ_T0088538.1 MGP_LPJ_G0033491.1 mouse_genomes_project 8 45113803 45122302 + Lrp2bp protein_coding processed_transcript MGP_LPJ_T0089937.1 MGP_LPJ_G0033924.1 mouse_genomes_project 8 107192582 107203040 + MGP_LPJ_P0089937 Ces2b protein_coding protein_coding MGP_LPJ_T0089938.1 MGP_LPJ_G0033924.1 mouse_genomes_project 8 107192611 107238832 + MGP_LPJ_P0089938 Ces2b protein_coding nonsense_mediated_decay MGP_LPJ_T0088517.1 MGP_LPJ_G0033486.1 mouse_genomes_project 8 44976468 45009768 + MGP_LPJ_P0088517 Pdlim3 protein_coding protein_coding MGP_LPJ_T0090213.1 MGP_LPJ_G0034032.1 mouse_genomes_project 8 113726877 113733582 + MGP_LPJ_P0090213 Cog4 protein_coding nonsense_mediated_decay MGP_LPJ_T0090214.1 MGP_LPJ_G0034032.1 mouse_genomes_project 8 113726887 113732199 + MGP_LPJ_P0090214 Cog4 protein_coding protein_coding MGP_LPJ_T0090215.1 MGP_LPJ_G0034032.1 mouse_genomes_project 8 113726892 113730127 + Cog4 protein_coding retained_intron MGP_LPJ_T0090216.1 MGP_LPJ_G0034032.1 mouse_genomes_project 8 113726904 113733646 + Cog4 protein_coding processed_transcript MGP_LPJ_T0090217.1 MGP_LPJ_G0034032.1 mouse_genomes_project 8 113726904 113765532 + MGP_LPJ_P0090217 Cog4 protein_coding protein_coding MGP_LPJ_T0090218.1 MGP_LPJ_G0034032.1 mouse_genomes_project 8 113726904 113733637 + MGP_LPJ_P0090218 Cog4 protein_coding nonsense_mediated_decay MGP_LPJ_T0090219.1 MGP_LPJ_G0034032.1 mouse_genomes_project 8 113726904 113733683 + MGP_LPJ_P0090219 Cog4 protein_coding nonsense_mediated_decay MGP_LPJ_T0090220.1 MGP_LPJ_G0034032.1 mouse_genomes_project 8 113726907 113765165 + MGP_LPJ_P0090220 Cog4 protein_coding protein_coding MGP_LPJ_T0090221.1 MGP_LPJ_G0034032.1 mouse_genomes_project 8 113729724 113765521 + MGP_LPJ_P0090221 Cog4 protein_coding protein_coding MGP_LPJ_T0090222.1 MGP_LPJ_G0034032.1 mouse_genomes_project 8 113741265 113751999 + Cog4 protein_coding retained_intron MGP_LPJ_T0090223.1 MGP_LPJ_G0034032.1 mouse_genomes_project 8 113741420 113765165 + MGP_LPJ_P0090223 Cog4 protein_coding nonsense_mediated_decay MGP_LPJ_T0090224.1 MGP_LPJ_G0034032.1 mouse_genomes_project 8 113745565 113749120 + Cog4 protein_coding retained_intron MGP_LPJ_T0088550.1 MGP_LPJ_G0033495.1 mouse_genomes_project 8 45394354 45396976 - MGP_LPJ_P0088550 Helt protein_coding protein_coding MGP_LPJ_T0089438.1 MGP_LPJ_G0033772.1 mouse_genomes_project 8 85696498 85712634 - MGP_LPJ_P0089438 Nacc1 protein_coding unknown_likely_coding MGP_LPJ_T0098681.1 MGP_LPJ_G0036950.1 mouse_genomes_project 8 125563742 125564409 - sense_intronic sense_intronic MGP_LPJ_T0009121.1 MGP_LPJ_G0007336.1 mouse_genomes_project 8 65153187 65198219 - lincRNA lincRNA MGP_LPJ_T0099793.1 MGP_LPJ_G0038056.1 mouse_genomes_project 8 118766786 118766890 - Gm23677 snRNA snRNA MGP_LPJ_T0089381.1 MGP_LPJ_G0033750.1 mouse_genomes_project 8 84929440 84944862 + MGP_LPJ_P0089381 Asf1b protein_coding protein_coding MGP_LPJ_T0089382.1 MGP_LPJ_G0033750.1 mouse_genomes_project 8 84929647 84942510 + Asf1b protein_coding processed_transcript MGP_LPJ_T0089383.1 MGP_LPJ_G0033750.1 mouse_genomes_project 8 84939721 84943208 + Asf1b protein_coding retained_intron MGP_LPJ_T0002360.1 MGP_LPJ_G0002267.1 mouse_genomes_project 8 101900709 101902729 + TEC TEC MGP_LPJ_T0088271.1 MGP_LPJ_G0033405.1 mouse_genomes_project 8 24193630 24218980 + MGP_LPJ_P0088271 Rnf170 protein_coding protein_coding MGP_LPJ_T0088272.1 MGP_LPJ_G0033405.1 mouse_genomes_project 8 24193640 24216434 + MGP_LPJ_P0088272 Rnf170 protein_coding nonsense_mediated_decay MGP_LPJ_T0088273.1 MGP_LPJ_G0033405.1 mouse_genomes_project 8 24193643 24216233 + MGP_LPJ_P0088273 Rnf170 protein_coding protein_coding MGP_LPJ_T0088274.1 MGP_LPJ_G0033405.1 mouse_genomes_project 8 24193648 24203403 + MGP_LPJ_P0088274 Rnf170 protein_coding protein_coding MGP_LPJ_T0088275.1 MGP_LPJ_G0033405.1 mouse_genomes_project 8 24193736 24203794 + MGP_LPJ_P0088275 Rnf170 protein_coding protein_coding MGP_LPJ_T0088276.1 MGP_LPJ_G0033405.1 mouse_genomes_project 8 24193826 24217757 + MGP_LPJ_P0088276 Rnf170 protein_coding nonsense_mediated_decay MGP_LPJ_T0088277.1 MGP_LPJ_G0033405.1 mouse_genomes_project 8 24193924 24203403 + MGP_LPJ_P0088277 Rnf170 protein_coding protein_coding MGP_LPJ_T0088278.1 MGP_LPJ_G0033405.1 mouse_genomes_project 8 24194740 24200491 + MGP_LPJ_P0088278 Rnf170 protein_coding protein_coding MGP_LPJ_T0088279.1 MGP_LPJ_G0033405.1 mouse_genomes_project 8 24198129 24216187 + MGP_LPJ_P0088279 Rnf170 protein_coding nonsense_mediated_decay MGP_LPJ_T0015969.1 MGP_LPJ_G0014060.1 mouse_genomes_project 8 127805771 127806569 - processed_pseudogene processed_pseudogene MGP_LPJ_T0090159.1 MGP_LPJ_G0034009.1 mouse_genomes_project 8 112262753 112317550 + MGP_LPJ_P0090159 Pmfbp1 protein_coding protein_coding MGP_LPJ_T0088961.1 MGP_LPJ_G0033616.1 mouse_genomes_project 8 70799667 70802097 - 2810428I15Rik protein_coding retained_intron MGP_LPJ_T0088962.1 MGP_LPJ_G0033616.1 mouse_genomes_project 8 70799670 70801488 - 2810428I15Rik protein_coding retained_intron MGP_LPJ_T0088963.1 MGP_LPJ_G0033616.1 mouse_genomes_project 8 70799670 70801802 - 2810428I15Rik protein_coding processed_transcript MGP_LPJ_T0088964.1 MGP_LPJ_G0033616.1 mouse_genomes_project 8 70799670 70802128 - MGP_LPJ_P0088964 2810428I15Rik protein_coding protein_coding MGP_LPJ_T0088965.1 MGP_LPJ_G0033616.1 mouse_genomes_project 8 70799674 70802113 - MGP_LPJ_P0088965 2810428I15Rik protein_coding protein_coding MGP_LPJ_T0088966.1 MGP_LPJ_G0033616.1 mouse_genomes_project 8 70799773 70801484 - 2810428I15Rik protein_coding retained_intron MGP_LPJ_T0088967.1 MGP_LPJ_G0033616.1 mouse_genomes_project 8 70800620 70802075 - 2810428I15Rik protein_coding retained_intron MGP_LPJ_T0088968.1 MGP_LPJ_G0033616.1 mouse_genomes_project 8 70801226 70802089 - 2810428I15Rik protein_coding retained_intron MGP_LPJ_T0011735.1 MGP_LPJ_G0009853.1 mouse_genomes_project 8 80758324 80758499 + Gm27820 misc_RNA misc_RNA MGP_LPJ_T0101018.1 MGP_LPJ_G0039281.1 mouse_genomes_project 8 23674909 23675039 + Gm24992 snoRNA snoRNA MGP_LPJ_T0088823.1 MGP_LPJ_G0033579.1 mouse_genomes_project 8 69948778 69956553 + Zfp964 protein_coding retained_intron MGP_LPJ_T0088824.1 MGP_LPJ_G0033579.1 mouse_genomes_project 8 69948791 69960655 + MGP_LPJ_P0088824 Zfp964 protein_coding protein_coding MGP_LPJ_T0088825.1 MGP_LPJ_G0033579.1 mouse_genomes_project 8 69952937 69957834 + MGP_LPJ_P0088825 Zfp964 protein_coding protein_coding MGP_LPJ_T0015896.1 MGP_LPJ_G0013987.1 mouse_genomes_project 8 1766879 1767362 + processed_pseudogene processed_pseudogene MGP_LPJ_T0089219.1 MGP_LPJ_G0033699.1 mouse_genomes_project 8 75442936 75463744 + MGP_LPJ_P0089219 Isx protein_coding protein_coding MGP_LPJ_T0089220.1 MGP_LPJ_G0033699.1 mouse_genomes_project 8 75443303 75463385 + MGP_LPJ_P0089220 Isx protein_coding protein_coding MGP_LPJ_T0088623.1 MGP_LPJ_G0033520.1 mouse_genomes_project 8 54194549 54232906 + MGP_LPJ_P0088623 Asb5 protein_coding protein_coding MGP_LPJ_T0015960.1 MGP_LPJ_G0014051.1 mouse_genomes_project 8 99284264 99285254 - processed_pseudogene processed_pseudogene MGP_LPJ_T0087704.1 MGP_LPJ_G0033216.1 mouse_genomes_project 8 253424 293379 + MGP_LPJ_P0087704 A430078G23Rik protein_coding protein_coding MGP_LPJ_T0089206.1 MGP_LPJ_G0033695.1 mouse_genomes_project 8 73209546 73282361 + MGP_LPJ_P0089206 Nwd1 protein_coding protein_coding MGP_LPJ_T0089207.1 MGP_LPJ_G0033695.1 mouse_genomes_project 8 73209558 73264265 + MGP_LPJ_P0089207 Nwd1 protein_coding protein_coding MGP_LPJ_T0089208.1 MGP_LPJ_G0033695.1 mouse_genomes_project 8 73209569 73278515 + MGP_LPJ_P0089208 Nwd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0089209.1 MGP_LPJ_G0033695.1 mouse_genomes_project 8 73209618 73285204 + MGP_LPJ_P0089209 Nwd1 protein_coding protein_coding MGP_LPJ_T0089210.1 MGP_LPJ_G0033695.1 mouse_genomes_project 8 73217430 73278585 + MGP_LPJ_P0089210 Nwd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0089211.1 MGP_LPJ_G0033695.1 mouse_genomes_project 8 73221052 73278546 + MGP_LPJ_P0089211 Nwd1 protein_coding protein_coding MGP_LPJ_T0089212.1 MGP_LPJ_G0033695.1 mouse_genomes_project 8 73251707 73263664 + Nwd1 protein_coding processed_transcript MGP_LPJ_T0088299.1 MGP_LPJ_G0033415.1 mouse_genomes_project 8 25412785 25429792 + MGP_LPJ_P0088299 Eif4ebp1 protein_coding protein_coding MGP_LPJ_T0090323.1 MGP_LPJ_G0034064.1 mouse_genomes_project 8 117556739 118508220 + MGP_LPJ_P0090323 Wwox protein_coding protein_coding MGP_LPJ_T0090324.1 MGP_LPJ_G0034064.1 mouse_genomes_project 8 117556779 117849574 + MGP_LPJ_P0090324 Wwox protein_coding protein_coding MGP_LPJ_T0090325.1 MGP_LPJ_G0034064.1 mouse_genomes_project 8 117556779 118009897 + MGP_LPJ_P0090325 Wwox protein_coding protein_coding MGP_LPJ_T0090326.1 MGP_LPJ_G0034064.1 mouse_genomes_project 8 117556786 117570898 + Wwox protein_coding processed_transcript MGP_LPJ_T0090327.1 MGP_LPJ_G0034064.1 mouse_genomes_project 8 117556786 117591614 + MGP_LPJ_P0090327 Wwox protein_coding protein_coding MGP_LPJ_T0090328.1 MGP_LPJ_G0034064.1 mouse_genomes_project 8 117565313 117634477 + Wwox protein_coding processed_transcript MGP_LPJ_T0090329.1 MGP_LPJ_G0034064.1 mouse_genomes_project 8 117734345 117837134 + Wwox protein_coding processed_transcript MGP_LPJ_T0090330.1 MGP_LPJ_G0034064.1 mouse_genomes_project 8 117842959 118507655 + Wwox protein_coding processed_transcript MGP_LPJ_T0090331.1 MGP_LPJ_G0034064.1 mouse_genomes_project 8 117842959 118162648 + Wwox protein_coding processed_transcript MGP_LPJ_T0090714.1 MGP_LPJ_G0034176.1 mouse_genomes_project 8 128490189 128524532 - MGP_LPJ_P0090714 2310022B05Rik protein_coding protein_coding MGP_LPJ_T0010965.1 MGP_LPJ_G0009083.1 mouse_genomes_project 8 6818300 6818453 - miRNA miRNA MGP_LPJ_T0090445.1 MGP_LPJ_G0034105.1 mouse_genomes_project 8 124161878 124192163 - MGP_LPJ_P0090445 1190005I06Rik protein_coding protein_coding MGP_LPJ_T0090447.1 MGP_LPJ_G0034105.1 mouse_genomes_project 8 124162077 124206733 - MGP_LPJ_P0090447 1190005I06Rik protein_coding protein_coding MGP_LPJ_T0090448.1 MGP_LPJ_G0034105.1 mouse_genomes_project 8 124162211 124192034 - MGP_LPJ_P0090448 1190005I06Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0089546.1 MGP_LPJ_G0033794.1 mouse_genomes_project 8 86065417 86072585 - MGP_LPJ_P0089546 Asna1 protein_coding protein_coding MGP_LPJ_T0089914.1 MGP_LPJ_G0033917.1 mouse_genomes_project 8 106844452 106856386 - Nae1 protein_coding processed_transcript MGP_LPJ_T0089915.1 MGP_LPJ_G0033917.1 mouse_genomes_project 8 106844452 106869204 - MGP_LPJ_P0089915 Nae1 protein_coding protein_coding MGP_LPJ_T0089916.1 MGP_LPJ_G0033917.1 mouse_genomes_project 8 106844452 106869203 - MGP_LPJ_P0089916 Nae1 protein_coding protein_coding MGP_LPJ_T0089917.1 MGP_LPJ_G0033917.1 mouse_genomes_project 8 106844458 106850412 - Nae1 protein_coding retained_intron MGP_LPJ_T0089918.1 MGP_LPJ_G0033917.1 mouse_genomes_project 8 106844461 106851466 - Nae1 protein_coding retained_intron MGP_LPJ_T0089919.1 MGP_LPJ_G0033917.1 mouse_genomes_project 8 106846622 106850472 - Nae1 protein_coding retained_intron MGP_LPJ_T0089920.1 MGP_LPJ_G0033917.1 mouse_genomes_project 8 106850959 106861120 - Nae1 protein_coding retained_intron MGP_LPJ_T0089921.1 MGP_LPJ_G0033917.1 mouse_genomes_project 8 106853208 106856418 - Nae1 protein_coding retained_intron MGP_LPJ_T0089922.1 MGP_LPJ_G0033917.1 mouse_genomes_project 8 106856109 106869155 - Nae1 protein_coding retained_intron MGP_LPJ_T0089923.1 MGP_LPJ_G0033917.1 mouse_genomes_project 8 106856538 106860539 - Nae1 protein_coding retained_intron MGP_LPJ_T0089924.1 MGP_LPJ_G0033917.1 mouse_genomes_project 8 106861234 106869181 - Nae1 protein_coding retained_intron MGP_LPJ_T0101055.1 MGP_LPJ_G0039318.1 mouse_genomes_project 8 103509054 103509179 - Gm22223 snoRNA snoRNA MGP_LPJ_T0018399.1 MGP_LPJ_G0015625.1 mouse_genomes_project 8 16136175 16165376 - Gm16725 processed_transcript processed_transcript MGP_LPJ_T0089035.1 MGP_LPJ_G0033642.1 mouse_genomes_project 8 71225688 71228474 - MGP_LPJ_P0089035 Rpl18a protein_coding protein_coding MGP_LPJ_T0089739.1 MGP_LPJ_G0033856.1 mouse_genomes_project 8 95340387 95485256 + MGP_LPJ_P0089739 Gnao1 protein_coding protein_coding MGP_LPJ_T0089740.1 MGP_LPJ_G0033856.1 mouse_genomes_project 8 95340870 95342003 + Gnao1 protein_coding retained_intron MGP_LPJ_T0089741.1 MGP_LPJ_G0033856.1 mouse_genomes_project 8 95341072 95504023 + MGP_LPJ_P0089741 Gnao1 protein_coding protein_coding MGP_LPJ_T0089742.1 MGP_LPJ_G0033856.1 mouse_genomes_project 8 95341074 95503592 + MGP_LPJ_P0089742 Gnao1 protein_coding protein_coding MGP_LPJ_T0089743.1 MGP_LPJ_G0033856.1 mouse_genomes_project 8 95341548 95492359 + Gnao1 protein_coding processed_transcript MGP_LPJ_T0089744.1 MGP_LPJ_G0033856.1 mouse_genomes_project 8 95341571 95495267 + MGP_LPJ_P0089744 Gnao1 protein_coding unknown_likely_coding MGP_LPJ_T0089745.1 MGP_LPJ_G0033856.1 mouse_genomes_project 8 95428343 95502799 + MGP_LPJ_P0089745 Gnao1 protein_coding nonsense_mediated_decay MGP_LPJ_T0089746.1 MGP_LPJ_G0033856.1 mouse_genomes_project 8 95484357 95485528 + Gnao1 protein_coding retained_intron MGP_LPJ_T0089747.1 MGP_LPJ_G0033856.1 mouse_genomes_project 8 95485257 95502696 + MGP_LPJ_P0089747 Gnao1 protein_coding protein_coding MGP_LPJ_T0089748.1 MGP_LPJ_G0033856.1 mouse_genomes_project 8 95485257 95502717 + MGP_LPJ_P0089748 Gnao1 protein_coding protein_coding MGP_LPJ_T0089749.1 MGP_LPJ_G0033856.1 mouse_genomes_project 8 95487796 95491430 + Gnao1 protein_coding processed_transcript MGP_LPJ_T0089750.1 MGP_LPJ_G0033856.1 mouse_genomes_project 8 95497481 95501653 + Gnao1 protein_coding retained_intron MGP_LPJ_T0089657.1 MGP_LPJ_G0033826.1 mouse_genomes_project 8 89524718 89526613 - Brd7 protein_coding processed_transcript MGP_LPJ_T0089658.1 MGP_LPJ_G0033826.1 mouse_genomes_project 8 89524729 89555821 - MGP_LPJ_P0089658 Brd7 protein_coding protein_coding MGP_LPJ_T0089659.1 MGP_LPJ_G0033826.1 mouse_genomes_project 8 89526480 89527614 - Brd7 protein_coding processed_transcript MGP_LPJ_T0089660.1 MGP_LPJ_G0033826.1 mouse_genomes_project 8 89526499 89529178 - Brd7 protein_coding retained_intron MGP_LPJ_T0089661.1 MGP_LPJ_G0033826.1 mouse_genomes_project 8 89526579 89536515 - Brd7 protein_coding processed_transcript MGP_LPJ_T0089662.1 MGP_LPJ_G0033826.1 mouse_genomes_project 8 89527241 89536437 - Brd7 protein_coding processed_transcript MGP_LPJ_T0089663.1 MGP_LPJ_G0033826.1 mouse_genomes_project 8 89551171 89555644 - Brd7 protein_coding processed_transcript MGP_LPJ_T0015941.1 MGP_LPJ_G0014032.1 mouse_genomes_project 8 76858159 76859167 + processed_pseudogene processed_pseudogene MGP_LPJ_T0089653.1 MGP_LPJ_G0033825.1 mouse_genomes_project 8 89460232 89523654 + MGP_LPJ_P0089653 Adcy7 protein_coding protein_coding MGP_LPJ_T0089654.1 MGP_LPJ_G0033825.1 mouse_genomes_project 8 89473211 89523654 + MGP_LPJ_P0089654 Adcy7 protein_coding protein_coding MGP_LPJ_T0089655.1 MGP_LPJ_G0033825.1 mouse_genomes_project 8 89480034 89523654 + MGP_LPJ_P0089655 Adcy7 protein_coding protein_coding MGP_LPJ_T0089656.1 MGP_LPJ_G0033825.1 mouse_genomes_project 8 89485324 89523654 + MGP_LPJ_P0089656 Adcy7 protein_coding protein_coding MGP_LPJ_T0088346.1 MGP_LPJ_G0033438.1 mouse_genomes_project 8 32216217 32379365 - MGP_LPJ_P0088346 Rbpms protein_coding protein_coding MGP_LPJ_T0088347.1 MGP_LPJ_G0033438.1 mouse_genomes_project 8 32216218 32379353 - MGP_LPJ_P0088347 Rbpms protein_coding protein_coding MGP_LPJ_T0088348.1 MGP_LPJ_G0033438.1 mouse_genomes_project 8 32216221 32379318 - MGP_LPJ_P0088348 Rbpms protein_coding protein_coding MGP_LPJ_T0088349.1 MGP_LPJ_G0033438.1 mouse_genomes_project 8 32217357 32379328 - MGP_LPJ_P0088349 Rbpms protein_coding nonsense_mediated_decay MGP_LPJ_T0088350.1 MGP_LPJ_G0033438.1 mouse_genomes_project 8 32217628 32284587 - MGP_LPJ_P0088350 Rbpms protein_coding nonsense_mediated_decay MGP_LPJ_T0088351.1 MGP_LPJ_G0033438.1 mouse_genomes_project 8 32217637 32241744 - MGP_LPJ_P0088351 Rbpms protein_coding nonsense_mediated_decay MGP_LPJ_T0088352.1 MGP_LPJ_G0033438.1 mouse_genomes_project 8 32217640 32241707 - MGP_LPJ_P0088352 Rbpms protein_coding nonsense_mediated_decay MGP_LPJ_T0088353.1 MGP_LPJ_G0033438.1 mouse_genomes_project 8 32217642 32294959 - Rbpms protein_coding processed_transcript MGP_LPJ_T0088354.1 MGP_LPJ_G0033438.1 mouse_genomes_project 8 32217648 32232182 - Rbpms protein_coding retained_intron MGP_LPJ_T0088355.1 MGP_LPJ_G0033438.1 mouse_genomes_project 8 32217757 32231851 - MGP_LPJ_P0088355 Rbpms protein_coding unknown_likely_coding MGP_LPJ_T0088356.1 MGP_LPJ_G0033438.1 mouse_genomes_project 8 32238849 32379317 - MGP_LPJ_P0088356 Rbpms protein_coding protein_coding MGP_LPJ_T0088357.1 MGP_LPJ_G0033438.1 mouse_genomes_project 8 32241649 32281577 - MGP_LPJ_P0088357 Rbpms protein_coding protein_coding MGP_LPJ_T0088358.1 MGP_LPJ_G0033438.1 mouse_genomes_project 8 32241671 32334544 - MGP_LPJ_P0088358 Rbpms protein_coding protein_coding MGP_LPJ_T0088359.1 MGP_LPJ_G0033438.1 mouse_genomes_project 8 32306498 32336546 - Rbpms protein_coding processed_transcript MGP_LPJ_T0089824.1 MGP_LPJ_G0033881.1 mouse_genomes_project 8 96493264 96509370 - MGP_LPJ_P0089824 Ccdc102a protein_coding protein_coding MGP_LPJ_T0089825.1 MGP_LPJ_G0033881.1 mouse_genomes_project 8 96504838 96508794 - MGP_LPJ_P0089825 Ccdc102a protein_coding protein_coding MGP_LPJ_T0005423.1 MGP_LPJ_G0004597.1 mouse_genomes_project 8 125179738 125181098 + Gm27045 antisense antisense MGP_LPJ_T0088016.1 MGP_LPJ_G0033310.1 mouse_genomes_project 8 12133893 12135995 - MGP_LPJ_P0088016 protein_coding protein_coding MGP_LPJ_T0005362.1 MGP_LPJ_G0004546.1 mouse_genomes_project 8 12417836 12421636 - 5830468F06Rik antisense antisense MGP_LPJ_T0089561.1 MGP_LPJ_G0033799.1 mouse_genomes_project 8 86128943 86132217 + MGP_LPJ_P0089561 Dhps protein_coding protein_coding MGP_LPJ_T0089562.1 MGP_LPJ_G0033799.1 mouse_genomes_project 8 86128982 86132211 + MGP_LPJ_P0089562 Dhps protein_coding nonsense_mediated_decay MGP_LPJ_T0089563.1 MGP_LPJ_G0033799.1 mouse_genomes_project 8 86128992 86129997 + Dhps protein_coding retained_intron MGP_LPJ_T0089564.1 MGP_LPJ_G0033799.1 mouse_genomes_project 8 86129487 86130633 + Dhps protein_coding retained_intron MGP_LPJ_T0089565.1 MGP_LPJ_G0033799.1 mouse_genomes_project 8 86130106 86131065 + Dhps protein_coding retained_intron MGP_LPJ_T0089566.1 MGP_LPJ_G0033799.1 mouse_genomes_project 8 86130106 86132206 + Dhps protein_coding retained_intron MGP_LPJ_T0089567.1 MGP_LPJ_G0033799.1 mouse_genomes_project 8 86130632 86131503 + Dhps protein_coding retained_intron MGP_LPJ_T0089568.1 MGP_LPJ_G0033799.1 mouse_genomes_project 8 86131753 86132206 + Dhps protein_coding retained_intron MGP_LPJ_T0010966.1 MGP_LPJ_G0009084.1 mouse_genomes_project 8 8788757 8788800 - Mir7238 miRNA miRNA MGP_LPJ_T0090431.1 MGP_LPJ_G0034102.1 mouse_genomes_project 8 123689301 123701435 - MGP_LPJ_P0090431 Fam92b protein_coding protein_coding MGP_LPJ_T0090432.1 MGP_LPJ_G0034102.1 mouse_genomes_project 8 123690290 123701332 - Fam92b protein_coding retained_intron MGP_LPJ_T0090433.1 MGP_LPJ_G0034102.1 mouse_genomes_project 8 123694632 123701396 - MGP_LPJ_P0090433 Fam92b protein_coding protein_coding MGP_LPJ_T0090434.1 MGP_LPJ_G0034102.1 mouse_genomes_project 8 123698685 123701416 - Fam92b protein_coding retained_intron MGP_LPJ_T0087845.1 MGP_LPJ_G0033255.1 mouse_genomes_project 8 1988715 2008332 - MGP_LPJ_P0087845 Slc10a2 protein_coding protein_coding MGP_LPJ_T0009086.1 MGP_LPJ_G0007308.1 mouse_genomes_project 8 9931493 9943416 - Gm15348 lincRNA lincRNA MGP_LPJ_T0009142.1 MGP_LPJ_G0007354.1 mouse_genomes_project 8 88017426 88036179 + Gm27167 lincRNA lincRNA MGP_LPJ_T0009208.1 MGP_LPJ_G0007398.1 mouse_genomes_project 8 125045464 125051445 + Gm26747 lincRNA lincRNA MGP_LPJ_T0087832.1 MGP_LPJ_G0033251.1 mouse_genomes_project 8 1394995 1425351 + MGP_LPJ_P0087832 Cers4 protein_coding protein_coding MGP_LPJ_T0087833.1 MGP_LPJ_G0033251.1 mouse_genomes_project 8 1395109 1422412 + MGP_LPJ_P0087833 Cers4 protein_coding protein_coding MGP_LPJ_T0087834.1 MGP_LPJ_G0033251.1 mouse_genomes_project 8 1395168 1439014 + MGP_LPJ_P0087834 Cers4 protein_coding protein_coding MGP_LPJ_T0087835.1 MGP_LPJ_G0033251.1 mouse_genomes_project 8 1395371 1430379 + MGP_LPJ_P0087835 Cers4 protein_coding nonsense_mediated_decay MGP_LPJ_T0087836.1 MGP_LPJ_G0033251.1 mouse_genomes_project 8 1395418 1431809 + Cers4 protein_coding retained_intron MGP_LPJ_T0087837.1 MGP_LPJ_G0033251.1 mouse_genomes_project 8 1395421 1431651 + MGP_LPJ_P0087837 Cers4 protein_coding protein_coding MGP_LPJ_T0087838.1 MGP_LPJ_G0033251.1 mouse_genomes_project 8 1395427 1429154 + Cers4 protein_coding retained_intron MGP_LPJ_T0087839.1 MGP_LPJ_G0033251.1 mouse_genomes_project 8 1395451 1429245 + Cers4 protein_coding retained_intron MGP_LPJ_T0087840.1 MGP_LPJ_G0033251.1 mouse_genomes_project 8 1395490 1427220 + Cers4 protein_coding retained_intron MGP_LPJ_T0090099.1 MGP_LPJ_G0033989.1 mouse_genomes_project 8 109064802 109114708 + MGP_LPJ_P0090099 Cdh3 protein_coding protein_coding MGP_LPJ_T0101069.1 MGP_LPJ_G0039332.1 mouse_genomes_project 8 133182476 133182608 + Gm22545 snoRNA snoRNA MGP_LPJ_T0088859.1 MGP_LPJ_G0033591.1 mouse_genomes_project 8 70181416 70182751 + MGP_LPJ_P0088859 Tssk6 protein_coding protein_coding MGP_LPJ_T0088381.1 MGP_LPJ_G0033450.1 mouse_genomes_project 8 34412450 34414303 - MGP_LPJ_P0088381 Cldn23 protein_coding protein_coding MGP_LPJ_T0089695.1 MGP_LPJ_G0033838.1 mouse_genomes_project 8 92563775 92673397 - MGP_LPJ_P0089695 Rpgrip1l protein_coding protein_coding MGP_LPJ_T0089696.1 MGP_LPJ_G0033838.1 mouse_genomes_project 8 92565693 92673358 - MGP_LPJ_P0089696 Rpgrip1l protein_coding nonsense_mediated_decay MGP_LPJ_T0089697.1 MGP_LPJ_G0033838.1 mouse_genomes_project 8 92627734 92635790 - Rpgrip1l protein_coding retained_intron MGP_LPJ_T0089698.1 MGP_LPJ_G0033838.1 mouse_genomes_project 8 92668109 92671178 - MGP_LPJ_P0089698 Rpgrip1l protein_coding protein_coding MGP_LPJ_T0088268.1 MGP_LPJ_G0033404.1 mouse_genomes_project 8 24081505 24193485 - MGP_LPJ_P0088268 Hook3 protein_coding protein_coding MGP_LPJ_T0088269.1 MGP_LPJ_G0033404.1 mouse_genomes_project 8 24098173 24142604 - MGP_LPJ_P0088269 Hook3 protein_coding protein_coding MGP_LPJ_T0088270.1 MGP_LPJ_G0033404.1 mouse_genomes_project 8 24098182 24106043 - Hook3 protein_coding retained_intron MGP_LPJ_T0015918.1 MGP_LPJ_G0014009.1 mouse_genomes_project 8 30881232 30881679 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015947.1 MGP_LPJ_G0014038.1 mouse_genomes_project 8 80917945 80919184 - processed_pseudogene processed_pseudogene MGP_LPJ_T0088407.1 MGP_LPJ_G0033459.1 mouse_genomes_project 8 39099232 39106969 - MGP_LPJ_P0088407 Fgf20 protein_coding protein_coding MGP_LPJ_T0088408.1 MGP_LPJ_G0033459.1 mouse_genomes_project 8 39099791 39136774 - MGP_LPJ_P0088408 Fgf20 protein_coding protein_coding MGP_LPJ_T0088654.1 MGP_LPJ_G0033532.1 mouse_genomes_project 8 57254118 57257069 + MGP_LPJ_P0088654 Hmgb2 protein_coding protein_coding MGP_LPJ_T0090361.1 MGP_LPJ_G0034080.1 mouse_genomes_project 8 121144286 121154586 - MGP_LPJ_P0090361 Mphosph6 protein_coding protein_coding MGP_LPJ_T0009109.1 MGP_LPJ_G0007324.1 mouse_genomes_project 8 32855929 32878849 + lincRNA lincRNA MGP_LPJ_T0088729.1 MGP_LPJ_G0033550.1 mouse_genomes_project 8 64636022 64743827 - MGP_LPJ_P0088729 Cpe protein_coding protein_coding MGP_LPJ_T0089033.1 MGP_LPJ_G0033640.1 mouse_genomes_project 8 71195699 71202591 - MGP_LPJ_P0089033 Ccdc124 protein_coding protein_coding MGP_LPJ_T0088122.1 MGP_LPJ_G0033365.1 mouse_genomes_project 8 20481771 20507508 - MGP_LPJ_P0088122 Polb protein_coding protein_coding MGP_LPJ_T0089247.1 MGP_LPJ_G0033707.1 mouse_genomes_project 8 77873336 78154459 - MGP_LPJ_P0089247 Arhgap10 protein_coding protein_coding MGP_LPJ_T0089185.1 MGP_LPJ_G0033684.1 mouse_genomes_project 8 72799811 72803889 + MGP_LPJ_P0089185 Fam32a protein_coding protein_coding MGP_LPJ_T0088596.1 MGP_LPJ_G0033509.1 mouse_genomes_project 8 46894143 46895899 + MGP_LPJ_P0088596 protein_coding protein_coding MGP_LPJ_T0088374.1 MGP_LPJ_G0033444.1 mouse_genomes_project 8 33328050 33340553 + MGP_LPJ_P0088374 Dusp4 protein_coding protein_coding MGP_LPJ_T0090053.1 MGP_LPJ_G0033971.1 mouse_genomes_project 8 108433069 108471610 + MGP_LPJ_P0090053 Pskh1 protein_coding protein_coding MGP_LPJ_T0088636.1 MGP_LPJ_G0033523.1 mouse_genomes_project 8 54600795 54721780 + MGP_LPJ_P0088636 Gpm6a protein_coding protein_coding MGP_LPJ_T0090156.1 MGP_LPJ_G0034007.1 mouse_genomes_project 8 110239869 110249566 - MGP_LPJ_P0090156 Psmd7 protein_coding protein_coding MGP_LPJ_T0089952.1 MGP_LPJ_G0033933.1 mouse_genomes_project 8 107641333 107692294 + MGP_LPJ_P0089952 Cbfb protein_coding protein_coding MGP_LPJ_T0089953.1 MGP_LPJ_G0033933.1 mouse_genomes_project 8 107642449 107692286 + MGP_LPJ_P0089953 Cbfb protein_coding protein_coding MGP_LPJ_T0089954.1 MGP_LPJ_G0033933.1 mouse_genomes_project 8 107642449 107692286 + MGP_LPJ_P0089954 Cbfb protein_coding protein_coding MGP_LPJ_T0089955.1 MGP_LPJ_G0033933.1 mouse_genomes_project 8 107642650 107692286 + MGP_LPJ_P0089955 Cbfb protein_coding protein_coding MGP_LPJ_T0089956.1 MGP_LPJ_G0033933.1 mouse_genomes_project 8 107642814 107650562 + Cbfb protein_coding retained_intron MGP_LPJ_T0089957.1 MGP_LPJ_G0033933.1 mouse_genomes_project 8 107643197 107668385 + Cbfb protein_coding processed_transcript MGP_LPJ_T0089958.1 MGP_LPJ_G0033933.1 mouse_genomes_project 8 107643269 107668365 + Cbfb protein_coding processed_transcript MGP_LPJ_T0102469.1 MGP_LPJ_G0040505.1 mouse_genomes_project 8 17013614 17015454 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0090486.1 MGP_LPJ_G0034114.1 mouse_genomes_project 8 125166915 125179571 - MGP_LPJ_P0090486 1700018B08Rik protein_coding protein_coding MGP_LPJ_T0090487.1 MGP_LPJ_G0034114.1 mouse_genomes_project 8 125166963 125179486 - MGP_LPJ_P0090487 1700018B08Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0090488.1 MGP_LPJ_G0034114.1 mouse_genomes_project 8 125166963 125179486 - MGP_LPJ_P0090488 1700018B08Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0090489.1 MGP_LPJ_G0034114.1 mouse_genomes_project 8 125167947 125181937 - MGP_LPJ_P0090489 1700018B08Rik protein_coding protein_coding MGP_LPJ_T0010991.1 MGP_LPJ_G0009109.1 mouse_genomes_project 8 71121012 71121070 + Mir7240 miRNA miRNA MGP_LPJ_T0088403.1 MGP_LPJ_G0033457.1 mouse_genomes_project 8 37832330 37977975 + MGP_LPJ_P0088403 Tusc3 protein_coding protein_coding MGP_LPJ_T0088404.1 MGP_LPJ_G0033457.1 mouse_genomes_project 8 37832526 37898245 + MGP_LPJ_P0088404 Tusc3 protein_coding protein_coding MGP_LPJ_T0015934.1 MGP_LPJ_G0014025.1 mouse_genomes_project 8 65914064 65914349 - processed_pseudogene processed_pseudogene MGP_LPJ_T0088306.1 MGP_LPJ_G0033420.1 mouse_genomes_project 8 26874121 27469614 - MGP_LPJ_P0088306 Unc5d protein_coding protein_coding MGP_LPJ_T0088307.1 MGP_LPJ_G0033420.1 mouse_genomes_project 8 26880172 27085165 - MGP_LPJ_P0088307 Unc5d protein_coding unknown_likely_coding MGP_LPJ_T0015951.1 MGP_LPJ_G0014042.1 mouse_genomes_project 8 82693015 82694632 + processed_pseudogene processed_pseudogene MGP_LPJ_T0090039.1 MGP_LPJ_G0033964.1 mouse_genomes_project 8 108281477 108351527 - MGP_LPJ_P0090039 Ranbp10 protein_coding protein_coding MGP_LPJ_T0015952.1 MGP_LPJ_G0014043.1 mouse_genomes_project 8 83505123 83506081 + processed_pseudogene processed_pseudogene MGP_LPJ_T0088080.1 MGP_LPJ_G0033337.1 mouse_genomes_project 8 18724050 18725889 - MGP_LPJ_P0088080 Gm15056 protein_coding protein_coding MGP_LPJ_T0088081.1 MGP_LPJ_G0033337.1 mouse_genomes_project 8 18724050 18725418 - MGP_LPJ_P0088081 Gm15056 protein_coding protein_coding MGP_LPJ_T0089974.1 MGP_LPJ_G0033938.1 mouse_genomes_project 8 107746242 107752128 + MGP_LPJ_P0089974 Hsf4 protein_coding nonsense_mediated_decay MGP_LPJ_T0089975.1 MGP_LPJ_G0033938.1 mouse_genomes_project 8 107746270 107752285 + MGP_LPJ_P0089975 Hsf4 protein_coding nonsense_mediated_decay MGP_LPJ_T0089976.1 MGP_LPJ_G0033938.1 mouse_genomes_project 8 107746315 107752100 + MGP_LPJ_P0089976 Hsf4 protein_coding protein_coding MGP_LPJ_T0089977.1 MGP_LPJ_G0033938.1 mouse_genomes_project 8 107746315 107752100 + MGP_LPJ_P0089977 Hsf4 protein_coding protein_coding MGP_LPJ_T0089978.1 MGP_LPJ_G0033938.1 mouse_genomes_project 8 107746315 107752287 + MGP_LPJ_P0089978 Hsf4 protein_coding protein_coding MGP_LPJ_T0087843.1 MGP_LPJ_G0033253.1 mouse_genomes_project 8 1579772 1580599 - MGP_LPJ_P0087843 protein_coding protein_coding MGP_LPJ_T0098313.1 MGP_LPJ_G0036594.1 mouse_genomes_project 8 2219915 2220034 - n-R5s94 rRNA rRNA MGP_LPJ_T0099762.1 MGP_LPJ_G0038025.1 mouse_genomes_project 8 45371394 45371491 + Gm24669 snRNA snRNA MGP_LPJ_T0005431.1 MGP_LPJ_G0004604.1 mouse_genomes_project 8 128154683 128162311 - Gm15775 antisense antisense MGP_LPJ_T0011743.1 MGP_LPJ_G0009861.1 mouse_genomes_project 8 115605071 115605176 + Gm22664 misc_RNA misc_RNA MGP_LPJ_T0090075.1 MGP_LPJ_G0033980.1 mouse_genomes_project 8 108609080 108685782 + MGP_LPJ_P0090075 Nfatc3 protein_coding protein_coding MGP_LPJ_T0090076.1 MGP_LPJ_G0033980.1 mouse_genomes_project 8 108609368 108671796 + MGP_LPJ_P0090076 Nfatc3 protein_coding unknown_likely_coding MGP_LPJ_T0087970.1 MGP_LPJ_G0033292.1 mouse_genomes_project 8 10594857 10636264 + MGP_LPJ_P0087970 Tfdp1 protein_coding protein_coding MGP_LPJ_T0009151.1 MGP_LPJ_G0007362.1 mouse_genomes_project 8 88601878 88605201 + Gm19872 lincRNA lincRNA MGP_LPJ_T0090031.1 MGP_LPJ_G0033959.1 mouse_genomes_project 8 108208163 108211068 - MGP_LPJ_P0090031 Acd protein_coding protein_coding MGP_LPJ_T0090624.1 MGP_LPJ_G0034149.1 mouse_genomes_project 8 126941044 126951933 + MGP_LPJ_P0090624 Spata33 protein_coding protein_coding MGP_LPJ_T0089174.1 MGP_LPJ_G0033677.1 mouse_genomes_project 8 72542455 72543385 + MGP_LPJ_P0089174 Olfr372 protein_coding protein_coding MGP_LPJ_T0089770.1 MGP_LPJ_G0033864.1 mouse_genomes_project 8 95732336 95733573 + MGP_LPJ_P0089770 Mt1 protein_coding protein_coding MGP_LPJ_T0089584.1 MGP_LPJ_G0033805.1 mouse_genomes_project 8 86299774 86336789 - MGP_LPJ_P0089584 Vps35 protein_coding protein_coding MGP_LPJ_T0087846.1 MGP_LPJ_G0033256.1 mouse_genomes_project 8 5598316 5641461 - MGP_LPJ_P0087846 Efnb2 protein_coding protein_coding MGP_LPJ_T0087847.1 MGP_LPJ_G0033256.1 mouse_genomes_project 8 5601482 5619929 - MGP_LPJ_P0087847 Efnb2 protein_coding protein_coding MGP_LPJ_T0089216.1 MGP_LPJ_G0033698.1 mouse_genomes_project 8 73393477 73910526 - MGP_LPJ_P0089216 Large protein_coding protein_coding MGP_LPJ_T0089217.1 MGP_LPJ_G0033698.1 mouse_genomes_project 8 73393477 73909542 - MGP_LPJ_P0089217 Large protein_coding protein_coding MGP_LPJ_T0089218.1 MGP_LPJ_G0033698.1 mouse_genomes_project 8 73601507 73654865 - Large protein_coding retained_intron MGP_LPJ_T0090710.1 MGP_LPJ_G0034174.1 mouse_genomes_project 8 128401373 128414393 - MGP_LPJ_P0090710 Agt protein_coding protein_coding MGP_LPJ_T0089415.1 MGP_LPJ_G0033766.1 mouse_genomes_project 8 85200359 85228365 - MGP_LPJ_P0089415 Zswim4 protein_coding protein_coding MGP_LPJ_T0089773.1 MGP_LPJ_G0033866.1 mouse_genomes_project 8 95894495 95931551 + MGP_LPJ_P0089773 Slc12a3 protein_coding protein_coding MGP_LPJ_T0089384.1 MGP_LPJ_G0033751.1 mouse_genomes_project 8 84948349 84972806 + MGP_LPJ_P0089384 Prkaca protein_coding protein_coding MGP_LPJ_T0087771.1 MGP_LPJ_G0033236.1 mouse_genomes_project 8 803234 810396 - MGP_LPJ_P0087771 Cd209d protein_coding protein_coding MGP_LPJ_T0088766.1 MGP_LPJ_G0033564.1 mouse_genomes_project 8 67683472 67684819 + MGP_LPJ_P0088766 Nat1 protein_coding protein_coding MGP_LPJ_T0009216.1 MGP_LPJ_G0007404.1 mouse_genomes_project 8 125926228 125929324 + Gm22 lincRNA lincRNA MGP_LPJ_T0009217.1 MGP_LPJ_G0007404.1 mouse_genomes_project 8 125926228 125929320 + Gm22 lincRNA lincRNA MGP_LPJ_T0088063.1 MGP_LPJ_G0033321.1 mouse_genomes_project 8 16489037 16492350 - MGP_LPJ_P0088063 Defb40 protein_coding protein_coding MGP_LPJ_T0101014.1 MGP_LPJ_G0039277.1 mouse_genomes_project 8 16445292 16445395 + Gm22551 snoRNA snoRNA MGP_LPJ_T0088296.1 MGP_LPJ_G0033414.1 mouse_genomes_project 8 25375029 25378842 - MGP_LPJ_P0088296 Adrb3 protein_coding protein_coding MGP_LPJ_T0088297.1 MGP_LPJ_G0033414.1 mouse_genomes_project 8 25375254 25377837 - MGP_LPJ_P0088297 Adrb3 protein_coding protein_coding MGP_LPJ_T0088298.1 MGP_LPJ_G0033414.1 mouse_genomes_project 8 25376052 25377748 - MGP_LPJ_P0088298 Adrb3 protein_coding protein_coding MGP_LPJ_T0090196.1 MGP_LPJ_G0034026.1 mouse_genomes_project 8 113049476 113055026 + MGP_LPJ_P0090196 Cmtr2 protein_coding protein_coding MGP_LPJ_T0090197.1 MGP_LPJ_G0034026.1 mouse_genomes_project 8 113051800 113058298 + MGP_LPJ_P0090197 Cmtr2 protein_coding protein_coding MGP_LPJ_T0015899.1 MGP_LPJ_G0013990.1 mouse_genomes_project 8 10206599 10206803 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005430.1 MGP_LPJ_G0004603.1 mouse_genomes_project 8 128135041 128136417 - 1810008B01Rik antisense antisense MGP_LPJ_T0090555.1 MGP_LPJ_G0034130.1 mouse_genomes_project 8 126132421 126142341 - MGP_LPJ_P0090555 Rnf166 protein_coding protein_coding MGP_LPJ_T0090556.1 MGP_LPJ_G0034130.1 mouse_genomes_project 8 126133135 126134501 - Rnf166 protein_coding retained_intron MGP_LPJ_T0090557.1 MGP_LPJ_G0034130.1 mouse_genomes_project 8 126134282 126141965 - Rnf166 protein_coding processed_transcript MGP_LPJ_T0088779.1 MGP_LPJ_G0033568.1 mouse_genomes_project 8 68488718 68565386 + MGP_LPJ_P0088779 Sh2d4a protein_coding protein_coding MGP_LPJ_T0089138.1 MGP_LPJ_G0033669.1 mouse_genomes_project 8 72076776 72078139 + MGP_LPJ_P0089138 Insl3 protein_coding protein_coding MGP_LPJ_T0090739.1 MGP_LPJ_G0034186.1 mouse_genomes_project 8 128896969 128919144 + MGP_LPJ_P0090739 Tsnax protein_coding protein_coding MGP_LPJ_T0088096.1 MGP_LPJ_G0033351.1 mouse_genomes_project 8 19830261 19902685 - MGP_LPJ_P0088096 Atp7b protein_coding protein_coding MGP_LPJ_T0088097.1 MGP_LPJ_G0033351.1 mouse_genomes_project 8 19832127 19902399 - MGP_LPJ_P0088097 Atp7b protein_coding protein_coding MGP_LPJ_T0088653.1 MGP_LPJ_G0033531.1 mouse_genomes_project 8 57219881 57225035 - MGP_LPJ_P0088653 Sap30 protein_coding protein_coding MGP_LPJ_T0088621.1 MGP_LPJ_G0033518.1 mouse_genomes_project 8 53689208 53796811 + MGP_LPJ_P0088621 Vegfc protein_coding protein_coding MGP_LPJ_T0087809.1 MGP_LPJ_G0033245.1 mouse_genomes_project 8 1153736 1156946 + MGP_LPJ_P0087809 Tgfbr3l protein_coding protein_coding MGP_LPJ_T0087810.1 MGP_LPJ_G0033245.1 mouse_genomes_project 8 1154155 1155044 + Tgfbr3l protein_coding processed_transcript MGP_LPJ_T0087811.1 MGP_LPJ_G0033245.1 mouse_genomes_project 8 1155851 1156946 + Tgfbr3l protein_coding processed_transcript MGP_LPJ_T0090769.1 MGP_LPJ_G0034196.1 mouse_genomes_project 8 130401356 130454362 - MGP_LPJ_P0090769 Tarbp1 protein_coding protein_coding MGP_LPJ_T0089982.1 MGP_LPJ_G0033941.1 mouse_genomes_project 8 107766062 107772237 - MGP_LPJ_P0089982 Exoc3l protein_coding protein_coding MGP_LPJ_T0005385.1 MGP_LPJ_G0004564.1 mouse_genomes_project 8 60988920 61065482 - Gm16178 antisense antisense MGP_LPJ_T0090738.1 MGP_LPJ_G0034185.1 mouse_genomes_project 8 128785877 128827233 - MGP_LPJ_P0090738 Egln1 protein_coding protein_coding MGP_LPJ_T0009212.1 MGP_LPJ_G0007401.1 mouse_genomes_project 8 125313238 125313702 + Gm27030 lincRNA lincRNA MGP_LPJ_T0088007.1 MGP_LPJ_G0033308.1 mouse_genomes_project 8 11452977 11455110 + MGP_LPJ_P0088007 protein_coding protein_coding MGP_LPJ_T0090377.1 MGP_LPJ_G0034085.1 mouse_genomes_project 8 122912852 122938770 + MGP_LPJ_P0090377 Necab2 protein_coding protein_coding MGP_LPJ_T0090378.1 MGP_LPJ_G0034085.1 mouse_genomes_project 8 122912894 122938541 + Necab2 protein_coding processed_transcript MGP_LPJ_T0090379.1 MGP_LPJ_G0034085.1 mouse_genomes_project 8 122918564 122937075 + MGP_LPJ_P0090379 Necab2 protein_coding protein_coding MGP_LPJ_T0089774.1 MGP_LPJ_G0033867.1 mouse_genomes_project 8 95954846 95963791 + MGP_LPJ_P0089774 Herpud1 protein_coding protein_coding MGP_LPJ_T0089775.1 MGP_LPJ_G0033867.1 mouse_genomes_project 8 95954903 95963772 + MGP_LPJ_P0089775 Herpud1 protein_coding protein_coding MGP_LPJ_T0089776.1 MGP_LPJ_G0033867.1 mouse_genomes_project 8 95955961 95960875 + Herpud1 protein_coding processed_transcript MGP_LPJ_T0089777.1 MGP_LPJ_G0033867.1 mouse_genomes_project 8 95956007 95960715 + Herpud1 protein_coding processed_transcript MGP_LPJ_T0089778.1 MGP_LPJ_G0033867.1 mouse_genomes_project 8 95961939 95963323 + Herpud1 protein_coding retained_intron MGP_LPJ_T0087799.1 MGP_LPJ_G0033243.1 mouse_genomes_project 8 1128151 1142993 + MGP_LPJ_P0087799 Lrrc8e protein_coding protein_coding MGP_LPJ_T0101040.1 MGP_LPJ_G0039303.1 mouse_genomes_project 8 70411278 70411404 - Gm25906 snoRNA snoRNA MGP_LPJ_T0090234.1 MGP_LPJ_G0034036.1 mouse_genomes_project 8 113903267 113931093 - MGP_LPJ_P0090234 Ddx19b protein_coding protein_coding MGP_LPJ_T0090235.1 MGP_LPJ_G0034036.1 mouse_genomes_project 8 113906738 113935005 - MGP_LPJ_P0090235 Ddx19b protein_coding protein_coding MGP_LPJ_T0089191.1 MGP_LPJ_G0033686.1 mouse_genomes_project 8 72889966 72892591 + MGP_LPJ_P0089191 Klf2 protein_coding protein_coding MGP_LPJ_T0099772.1 MGP_LPJ_G0038035.1 mouse_genomes_project 8 76839021 76839128 - Gm22509 snRNA snRNA MGP_LPJ_T0090226.1 MGP_LPJ_G0034034.1 mouse_genomes_project 8 113807867 113865062 + MGP_LPJ_P0090226 St3gal2 protein_coding protein_coding MGP_LPJ_T0090227.1 MGP_LPJ_G0034034.1 mouse_genomes_project 8 113807867 113862405 + MGP_LPJ_P0090227 St3gal2 protein_coding protein_coding MGP_LPJ_T0090228.1 MGP_LPJ_G0034034.1 mouse_genomes_project 8 113807903 113849570 + St3gal2 protein_coding processed_transcript MGP_LPJ_T0090229.1 MGP_LPJ_G0034034.1 mouse_genomes_project 8 113821291 113849769 + St3gal2 protein_coding processed_transcript MGP_LPJ_T0090230.1 MGP_LPJ_G0034034.1 mouse_genomes_project 8 113830262 113849595 + St3gal2 protein_coding processed_transcript MGP_LPJ_T0088600.1 MGP_LPJ_G0033513.1 mouse_genomes_project 8 47318909 47366822 + MGP_LPJ_P0088600 Dctd protein_coding protein_coding MGP_LPJ_T0088601.1 MGP_LPJ_G0033513.1 mouse_genomes_project 8 47330909 47367872 + MGP_LPJ_P0088601 Dctd protein_coding protein_coding MGP_LPJ_T0088602.1 MGP_LPJ_G0033513.1 mouse_genomes_project 8 47330964 47367870 + MGP_LPJ_P0088602 Dctd protein_coding protein_coding MGP_LPJ_T0088603.1 MGP_LPJ_G0033513.1 mouse_genomes_project 8 47331113 47367870 + MGP_LPJ_P0088603 Dctd protein_coding nonsense_mediated_decay MGP_LPJ_T0088604.1 MGP_LPJ_G0033513.1 mouse_genomes_project 8 47331116 47363900 + Dctd protein_coding retained_intron MGP_LPJ_T0088605.1 MGP_LPJ_G0033513.1 mouse_genomes_project 8 47331140 47364806 + Dctd protein_coding processed_transcript MGP_LPJ_T0088606.1 MGP_LPJ_G0033513.1 mouse_genomes_project 8 47331162 47379426 + MGP_LPJ_P0088606 Dctd protein_coding protein_coding MGP_LPJ_T0090184.1 MGP_LPJ_G0034018.1 mouse_genomes_project 8 112661612 112698608 + Phlpp2 protein_coding retained_intron MGP_LPJ_T0090185.1 MGP_LPJ_G0034018.1 mouse_genomes_project 8 112661689 112738409 + MGP_LPJ_P0090185 Phlpp2 protein_coding protein_coding MGP_LPJ_T0087772.1 MGP_LPJ_G0033237.1 mouse_genomes_project 8 837758 846941 - MGP_LPJ_P0087772 Cd209b protein_coding nonsense_mediated_decay MGP_LPJ_T0087773.1 MGP_LPJ_G0033237.1 mouse_genomes_project 8 837760 846930 - MGP_LPJ_P0087773 Cd209b protein_coding protein_coding MGP_LPJ_T0087774.1 MGP_LPJ_G0033237.1 mouse_genomes_project 8 838709 846930 - MGP_LPJ_P0087774 Cd209b protein_coding protein_coding MGP_LPJ_T0087775.1 MGP_LPJ_G0033237.1 mouse_genomes_project 8 838780 846910 - MGP_LPJ_P0087775 Cd209b protein_coding protein_coding MGP_LPJ_T0089980.1 MGP_LPJ_G0033940.1 mouse_genomes_project 8 107756851 107765667 - MGP_LPJ_P0089980 4931428F04Rik protein_coding protein_coding MGP_LPJ_T0089981.1 MGP_LPJ_G0033940.1 mouse_genomes_project 8 107756851 107765667 - MGP_LPJ_P0089981 4931428F04Rik protein_coding protein_coding MGP_LPJ_T0088730.1 MGP_LPJ_G0033551.1 mouse_genomes_project 8 64772900 64791718 - MGP_LPJ_P0088730 Msmo1 protein_coding protein_coding MGP_LPJ_T0088731.1 MGP_LPJ_G0033551.1 mouse_genomes_project 8 64772970 64791507 - Msmo1 protein_coding processed_transcript MGP_LPJ_T0088732.1 MGP_LPJ_G0033551.1 mouse_genomes_project 8 64772988 64791504 - Msmo1 protein_coding retained_intron MGP_LPJ_T0088733.1 MGP_LPJ_G0033551.1 mouse_genomes_project 8 64773386 64776745 - Msmo1 protein_coding processed_transcript MGP_LPJ_T0088734.1 MGP_LPJ_G0033551.1 mouse_genomes_project 8 64778554 64788998 - MGP_LPJ_P0088734 Msmo1 protein_coding protein_coding MGP_LPJ_T0088735.1 MGP_LPJ_G0033551.1 mouse_genomes_project 8 64781178 64791474 - Msmo1 protein_coding retained_intron MGP_LPJ_T0088736.1 MGP_LPJ_G0033551.1 mouse_genomes_project 8 64784715 64791474 - MGP_LPJ_P0088736 Msmo1 protein_coding protein_coding MGP_LPJ_T0088912.1 MGP_LPJ_G0033605.1 mouse_genomes_project 8 70521006 70546907 + MGP_LPJ_P0088912 Sugp2 protein_coding protein_coding MGP_LPJ_T0088913.1 MGP_LPJ_G0033605.1 mouse_genomes_project 8 70521067 70529055 + MGP_LPJ_P0088913 Sugp2 protein_coding protein_coding MGP_LPJ_T0088914.1 MGP_LPJ_G0033605.1 mouse_genomes_project 8 70521073 70541085 + Sugp2 protein_coding retained_intron MGP_LPJ_T0088915.1 MGP_LPJ_G0033605.1 mouse_genomes_project 8 70522832 70529307 + MGP_LPJ_P0088915 Sugp2 protein_coding protein_coding MGP_LPJ_T0088916.1 MGP_LPJ_G0033605.1 mouse_genomes_project 8 70529987 70544592 + Sugp2 protein_coding retained_intron MGP_LPJ_T0088917.1 MGP_LPJ_G0033605.1 mouse_genomes_project 8 70534461 70538186 + Sugp2 protein_coding retained_intron MGP_LPJ_T0088918.1 MGP_LPJ_G0033605.1 mouse_genomes_project 8 70538381 70567037 + Sugp2 protein_coding processed_transcript MGP_LPJ_T0088919.1 MGP_LPJ_G0033605.1 mouse_genomes_project 8 70543797 70545724 + Sugp2 protein_coding retained_intron MGP_LPJ_T0088920.1 MGP_LPJ_G0033605.1 mouse_genomes_project 8 70546069 70549423 + Sugp2 protein_coding processed_transcript MGP_LPJ_T0088921.1 MGP_LPJ_G0033605.1 mouse_genomes_project 8 70546759 70549423 + Sugp2 protein_coding retained_intron MGP_LPJ_T0088922.1 MGP_LPJ_G0033605.1 mouse_genomes_project 8 70560766 70567036 + Sugp2 protein_coding processed_transcript MGP_LPJ_T0010975.1 MGP_LPJ_G0009093.1 mouse_genomes_project 8 20983445 20983570 - Gm44365 miRNA miRNA MGP_LPJ_T0088241.1 MGP_LPJ_G0033393.1 mouse_genomes_project 8 23764804 23770320 + MGP_LPJ_P0088241 Plpp5 protein_coding nonsense_mediated_decay MGP_LPJ_T0088242.1 MGP_LPJ_G0033393.1 mouse_genomes_project 8 23764804 23770320 + MGP_LPJ_P0088242 Plpp5 protein_coding nonsense_mediated_decay MGP_LPJ_T0088243.1 MGP_LPJ_G0033393.1 mouse_genomes_project 8 23764807 23770320 + Plpp5 protein_coding retained_intron MGP_LPJ_T0088244.1 MGP_LPJ_G0033393.1 mouse_genomes_project 8 23764807 23770320 + MGP_LPJ_P0088244 Plpp5 protein_coding protein_coding MGP_LPJ_T0088245.1 MGP_LPJ_G0033393.1 mouse_genomes_project 8 23764807 23770320 + MGP_LPJ_P0088245 Plpp5 protein_coding protein_coding MGP_LPJ_T0088246.1 MGP_LPJ_G0033393.1 mouse_genomes_project 8 23764843 23766895 + Plpp5 protein_coding retained_intron MGP_LPJ_T0088247.1 MGP_LPJ_G0033393.1 mouse_genomes_project 8 23765125 23770316 + Plpp5 protein_coding retained_intron MGP_LPJ_T0088248.1 MGP_LPJ_G0033393.1 mouse_genomes_project 8 23765199 23770320 + Plpp5 protein_coding processed_transcript MGP_LPJ_T0088249.1 MGP_LPJ_G0033393.1 mouse_genomes_project 8 23767701 23769881 + Plpp5 protein_coding retained_intron MGP_LPJ_T0089439.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85711140 85715728 + Trmt1 protein_coding retained_intron MGP_LPJ_T0089440.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85711152 85711957 + Trmt1 protein_coding processed_transcript MGP_LPJ_T0089441.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85711172 85716114 + MGP_LPJ_P0089441 Trmt1 protein_coding protein_coding MGP_LPJ_T0089442.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85713652 85726940 + MGP_LPJ_P0089442 Trmt1 protein_coding protein_coding MGP_LPJ_T0089443.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85714033 85726919 + MGP_LPJ_P0089443 Trmt1 protein_coding protein_coding MGP_LPJ_T0089444.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85714043 85715531 + Trmt1 protein_coding processed_transcript MGP_LPJ_T0089445.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85714043 85716162 + Trmt1 protein_coding retained_intron MGP_LPJ_T0089446.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85714043 85722659 + MGP_LPJ_P0089446 Trmt1 protein_coding protein_coding MGP_LPJ_T0089447.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85714050 85726918 + MGP_LPJ_P0089447 Trmt1 protein_coding protein_coding MGP_LPJ_T0089448.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85714055 85724049 + MGP_LPJ_P0089448 Trmt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0089449.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85714058 85722430 + MGP_LPJ_P0089449 Trmt1 protein_coding protein_coding MGP_LPJ_T0089450.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85714069 85726940 + Trmt1 protein_coding retained_intron MGP_LPJ_T0089451.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85714069 85716020 + Trmt1 protein_coding retained_intron MGP_LPJ_T0089452.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85714070 85715603 + Trmt1 protein_coding retained_intron MGP_LPJ_T0089453.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85714071 85714765 + Trmt1 protein_coding retained_intron MGP_LPJ_T0089454.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85714072 85715600 + Trmt1 protein_coding processed_transcript MGP_LPJ_T0089455.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85714072 85722602 + MGP_LPJ_P0089455 Trmt1 protein_coding protein_coding MGP_LPJ_T0089456.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85714072 85722578 + MGP_LPJ_P0089456 Trmt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0089457.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85714075 85717682 + Trmt1 protein_coding processed_transcript MGP_LPJ_T0089458.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85714254 85726917 + MGP_LPJ_P0089458 Trmt1 protein_coding protein_coding MGP_LPJ_T0089459.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85714267 85722368 + MGP_LPJ_P0089459 Trmt1 protein_coding protein_coding MGP_LPJ_T0089460.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85714422 85722659 + Trmt1 protein_coding processed_transcript MGP_LPJ_T0089461.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85715180 85724256 + Trmt1 protein_coding processed_transcript MGP_LPJ_T0089462.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85722050 85724560 + Trmt1 protein_coding retained_intron MGP_LPJ_T0089463.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85723967 85724645 + Trmt1 protein_coding retained_intron MGP_LPJ_T0089464.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85724098 85725384 + MGP_LPJ_P0089464 Trmt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0089465.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85724445 85725078 + Trmt1 protein_coding retained_intron MGP_LPJ_T0089466.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85725520 85726918 + MGP_LPJ_P0089466 Trmt1 protein_coding protein_coding MGP_LPJ_T0089467.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85726202 85726918 + Trmt1 protein_coding retained_intron MGP_LPJ_T0089468.1 MGP_LPJ_G0033773.1 mouse_genomes_project 8 85726312 85726783 + Trmt1 protein_coding retained_intron MGP_LPJ_T0090621.1 MGP_LPJ_G0034148.1 mouse_genomes_project 8 126933009 126940947 - MGP_LPJ_P0090621 Chmp1a protein_coding protein_coding MGP_LPJ_T0090622.1 MGP_LPJ_G0034148.1 mouse_genomes_project 8 126934350 126937956 - Chmp1a protein_coding retained_intron MGP_LPJ_T0090623.1 MGP_LPJ_G0034148.1 mouse_genomes_project 8 126937773 126940950 - Chmp1a protein_coding retained_intron MGP_LPJ_T0089416.1 MGP_LPJ_G0033767.1 mouse_genomes_project 8 85238536 85242378 - MGP_LPJ_P0089416 D8Ertd738e protein_coding protein_coding MGP_LPJ_T0088578.1 MGP_LPJ_G0033502.1 mouse_genomes_project 8 46337184 46518119 - MGP_LPJ_P0088578 Stox2 protein_coding protein_coding MGP_LPJ_T0088579.1 MGP_LPJ_G0033502.1 mouse_genomes_project 8 46337184 46451963 - MGP_LPJ_P0088579 Stox2 protein_coding protein_coding MGP_LPJ_T0088832.1 MGP_LPJ_G0033584.1 mouse_genomes_project 8 70066822 70083372 + MGP_LPJ_P0088832 Atp13a1 protein_coding protein_coding MGP_LPJ_T0015966.1 MGP_LPJ_G0014057.1 mouse_genomes_project 8 120390729 120391133 + processed_pseudogene processed_pseudogene MGP_LPJ_T0088457.1 MGP_LPJ_G0033469.1 mouse_genomes_project 8 40063440 40086302 - MGP_LPJ_P0088457 Fgl1 protein_coding protein_coding MGP_LPJ_T0088458.1 MGP_LPJ_G0033469.1 mouse_genomes_project 8 40069620 40086299 - Fgl1 protein_coding retained_intron MGP_LPJ_T0088485.1 MGP_LPJ_G0033483.1 mouse_genomes_project 8 44397133 44419136 - MGP_LPJ_P0088485 Fam149a protein_coding protein_coding MGP_LPJ_T0088486.1 MGP_LPJ_G0033483.1 mouse_genomes_project 8 44397141 44442075 - MGP_LPJ_P0088486 Fam149a protein_coding protein_coding MGP_LPJ_T0088487.1 MGP_LPJ_G0033483.1 mouse_genomes_project 8 44399175 44419033 - MGP_LPJ_P0088487 Fam149a protein_coding protein_coding MGP_LPJ_T0011012.1 MGP_LPJ_G0009130.1 mouse_genomes_project 8 86111751 86111838 + Mir7070 miRNA miRNA MGP_LPJ_T0090369.1 MGP_LPJ_G0034082.1 mouse_genomes_project 8 122797374 122801763 + MGP_LPJ_P0090369 Hsbp1 protein_coding protein_coding MGP_LPJ_T0089269.1 MGP_LPJ_G0033714.1 mouse_genomes_project 8 79206525 79460018 + MGP_LPJ_P0089269 Slc10a7 protein_coding protein_coding MGP_LPJ_T0089865.1 MGP_LPJ_G0033898.1 mouse_genomes_project 8 97311509 97347439 + MGP_LPJ_P0089865 Ndrg4 protein_coding protein_coding MGP_LPJ_T0089866.1 MGP_LPJ_G0033898.1 mouse_genomes_project 8 97312614 97352998 + MGP_LPJ_P0089866 Ndrg4 protein_coding protein_coding MGP_LPJ_T0089867.1 MGP_LPJ_G0033898.1 mouse_genomes_project 8 97312781 97352994 + MGP_LPJ_P0089867 Ndrg4 protein_coding nonsense_mediated_decay MGP_LPJ_T0089868.1 MGP_LPJ_G0033898.1 mouse_genomes_project 8 97312883 97353007 + MGP_LPJ_P0089868 Ndrg4 protein_coding protein_coding MGP_LPJ_T0089869.1 MGP_LPJ_G0033898.1 mouse_genomes_project 8 97344868 97349186 + Ndrg4 protein_coding processed_transcript MGP_LPJ_T0089870.1 MGP_LPJ_G0033898.1 mouse_genomes_project 8 97347404 97349684 + Ndrg4 protein_coding retained_intron MGP_LPJ_T0089871.1 MGP_LPJ_G0033898.1 mouse_genomes_project 8 97348201 97351960 + Ndrg4 protein_coding processed_transcript MGP_LPJ_T0089872.1 MGP_LPJ_G0033898.1 mouse_genomes_project 8 97349938 97351257 + Ndrg4 protein_coding retained_intron MGP_LPJ_T0087859.1 MGP_LPJ_G0033264.1 mouse_genomes_project 8 8096292 8117772 - MGP_LPJ_P0087859 Irs2 protein_coding protein_coding MGP_LPJ_T0088591.1 MGP_LPJ_G0033506.1 mouse_genomes_project 8 46843966 46851946 - MGP_LPJ_P0088591 Ing2 protein_coding protein_coding MGP_LPJ_T0088592.1 MGP_LPJ_G0033506.1 mouse_genomes_project 8 46843966 46850477 - MGP_LPJ_P0088592 Ing2 protein_coding protein_coding MGP_LPJ_T0088593.1 MGP_LPJ_G0033506.1 mouse_genomes_project 8 46845543 46852344 - MGP_LPJ_P0088593 Ing2 protein_coding protein_coding MGP_LPJ_T0101034.1 MGP_LPJ_G0039297.1 mouse_genomes_project 8 63076176 63076310 - Gm24236 snoRNA snoRNA MGP_LPJ_T0088747.1 MGP_LPJ_G0033558.1 mouse_genomes_project 8 65687912 66586372 + protein_coding processed_transcript MGP_LPJ_T0088748.1 MGP_LPJ_G0033558.1 mouse_genomes_project 8 65688021 66585783 + MGP_LPJ_P0088748 protein_coding protein_coding MGP_LPJ_T0088749.1 MGP_LPJ_G0033558.1 mouse_genomes_project 8 65688037 66586125 + MGP_LPJ_P0088749 protein_coding protein_coding MGP_LPJ_T0088750.1 MGP_LPJ_G0033558.1 mouse_genomes_project 8 65688049 66063031 + protein_coding retained_intron MGP_LPJ_T0088751.1 MGP_LPJ_G0033558.1 mouse_genomes_project 8 65688098 66588049 + MGP_LPJ_P0088751 protein_coding protein_coding MGP_LPJ_T0088752.1 MGP_LPJ_G0033558.1 mouse_genomes_project 8 65688537 66586839 + MGP_LPJ_P0088752 protein_coding protein_coding MGP_LPJ_T0088753.1 MGP_LPJ_G0033558.1 mouse_genomes_project 8 66061859 66588037 + MGP_LPJ_P0088753 protein_coding protein_coding MGP_LPJ_T0088754.1 MGP_LPJ_G0033558.1 mouse_genomes_project 8 66220990 66588037 + MGP_LPJ_P0088754 protein_coding protein_coding MGP_LPJ_T0088755.1 MGP_LPJ_G0033558.1 mouse_genomes_project 8 66220990 66588037 + MGP_LPJ_P0088755 protein_coding protein_coding MGP_LPJ_T0088756.1 MGP_LPJ_G0033558.1 mouse_genomes_project 8 66498650 66586833 + MGP_LPJ_P0088756 protein_coding protein_coding MGP_LPJ_T0088757.1 MGP_LPJ_G0033558.1 mouse_genomes_project 8 66498657 66586843 + MGP_LPJ_P0088757 protein_coding protein_coding MGP_LPJ_T0090342.1 MGP_LPJ_G0034069.1 mouse_genomes_project 8 120173910 120193125 + MGP_LPJ_P0090342 Cenpn protein_coding unknown_likely_coding MGP_LPJ_T0005398.1 MGP_LPJ_G0004575.1 mouse_genomes_project 8 85622931 85629568 - Gm16183 antisense antisense MGP_LPJ_T0089377.1 MGP_LPJ_G0033749.1 mouse_genomes_project 8 84905903 84929139 - MGP_LPJ_P0089377 Gm10644 protein_coding protein_coding MGP_LPJ_T0090089.1 MGP_LPJ_G0033985.1 mouse_genomes_project 8 108770986 108813323 + MGP_LPJ_P0090089 Prmt7 protein_coding protein_coding MGP_LPJ_T0090090.1 MGP_LPJ_G0033985.1 mouse_genomes_project 8 108771073 108795981 + MGP_LPJ_P0090090 Prmt7 protein_coding protein_coding MGP_LPJ_T0090091.1 MGP_LPJ_G0033985.1 mouse_genomes_project 8 108771087 108803777 + Prmt7 protein_coding retained_intron MGP_LPJ_T0090092.1 MGP_LPJ_G0033985.1 mouse_genomes_project 8 108771268 108787893 + MGP_LPJ_P0090092 Prmt7 protein_coding protein_coding MGP_LPJ_T0090093.1 MGP_LPJ_G0033985.1 mouse_genomes_project 8 108772576 108798651 + MGP_LPJ_P0090093 Prmt7 protein_coding protein_coding MGP_LPJ_T0090094.1 MGP_LPJ_G0033985.1 mouse_genomes_project 8 108795116 108797986 + Prmt7 protein_coding processed_transcript MGP_LPJ_T0090095.1 MGP_LPJ_G0033985.1 mouse_genomes_project 8 108798352 108805315 + Prmt7 protein_coding processed_transcript MGP_LPJ_T0089769.1 MGP_LPJ_G0033863.1 mouse_genomes_project 8 95725832 95726782 + MGP_LPJ_P0089769 Mt2 protein_coding protein_coding MGP_LPJ_T0015911.1 MGP_LPJ_G0014002.1 mouse_genomes_project 8 18703144 18704267 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099763.1 MGP_LPJ_G0038026.1 mouse_genomes_project 8 49916309 49916372 + Gm23986 snRNA snRNA MGP_LPJ_T0089628.1 MGP_LPJ_G0033819.1 mouse_genomes_project 8 88610268 88614007 - MGP_LPJ_P0089628 Cbln1 protein_coding protein_coding MGP_LPJ_T0089629.1 MGP_LPJ_G0033819.1 mouse_genomes_project 8 88610652 88613801 - MGP_LPJ_P0089629 Cbln1 protein_coding protein_coding MGP_LPJ_T0099789.1 MGP_LPJ_G0038052.1 mouse_genomes_project 8 113278629 113278736 - Gm23627 snRNA snRNA MGP_LPJ_T0089037.1 MGP_LPJ_G0033644.1 mouse_genomes_project 8 71267261 71268867 + MGP_LPJ_P0089037 protein_coding protein_coding MGP_LPJ_T0088947.1 MGP_LPJ_G0033610.1 mouse_genomes_project 8 70622114 70644577 - MGP_LPJ_P0088947 Upf1 protein_coding protein_coding MGP_LPJ_T0088948.1 MGP_LPJ_G0033610.1 mouse_genomes_project 8 70622978 70644319 - MGP_LPJ_P0088948 Upf1 protein_coding unknown_likely_coding MGP_LPJ_T0087857.1 MGP_LPJ_G0033263.1 mouse_genomes_project 8 7305781 7708939 + MGP_LPJ_P0087857 Myo16 protein_coding unknown_likely_coding MGP_LPJ_T0087858.1 MGP_LPJ_G0033263.1 mouse_genomes_project 8 7330748 7710029 + MGP_LPJ_P0087858 Myo16 protein_coding protein_coding MGP_LPJ_T0015921.1 MGP_LPJ_G0014012.1 mouse_genomes_project 8 33673167 33673700 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011018.1 MGP_LPJ_G0009136.1 mouse_genomes_project 8 94355405 94355463 - Gm22151 miRNA miRNA MGP_LPJ_T0089215.1 MGP_LPJ_G0033697.1 mouse_genomes_project 8 73335109 73337683 + MGP_LPJ_P0089215 F2rl3 protein_coding protein_coding MGP_LPJ_T0088999.1 MGP_LPJ_G0033622.1 mouse_genomes_project 8 70901493 70912283 - MGP_LPJ_P0088999 Ssbp4 protein_coding protein_coding MGP_LPJ_T0089259.1 MGP_LPJ_G0033711.1 mouse_genomes_project 8 78893195 78900874 + MGP_LPJ_P0089259 Ttc29 protein_coding protein_coding MGP_LPJ_T0089260.1 MGP_LPJ_G0033711.1 mouse_genomes_project 8 78893200 78900732 + MGP_LPJ_P0089260 Ttc29 protein_coding protein_coding MGP_LPJ_T0089261.1 MGP_LPJ_G0033711.1 mouse_genomes_project 8 78893213 78897917 + Ttc29 protein_coding processed_transcript MGP_LPJ_T0089262.1 MGP_LPJ_G0033711.1 mouse_genomes_project 8 78893240 79084238 + MGP_LPJ_P0089262 Ttc29 protein_coding protein_coding MGP_LPJ_T0089263.1 MGP_LPJ_G0033711.1 mouse_genomes_project 8 78893248 78897861 + Ttc29 protein_coding processed_transcript MGP_LPJ_T0089264.1 MGP_LPJ_G0033711.1 mouse_genomes_project 8 78898692 79083595 + MGP_LPJ_P0089264 Ttc29 protein_coding protein_coding MGP_LPJ_T0089265.1 MGP_LPJ_G0033711.1 mouse_genomes_project 8 78932647 78958677 + Ttc29 protein_coding retained_intron MGP_LPJ_T0089266.1 MGP_LPJ_G0033711.1 mouse_genomes_project 8 79079220 79083686 + Ttc29 protein_coding processed_transcript MGP_LPJ_T0088787.1 MGP_LPJ_G0033570.1 mouse_genomes_project 8 69020715 69056680 + MGP_LPJ_P0088787 Ints10 protein_coding protein_coding MGP_LPJ_T0088788.1 MGP_LPJ_G0033570.1 mouse_genomes_project 8 69020721 69049815 + MGP_LPJ_P0088788 Ints10 protein_coding protein_coding MGP_LPJ_T0088789.1 MGP_LPJ_G0033570.1 mouse_genomes_project 8 69020742 69025495 + Ints10 protein_coding retained_intron MGP_LPJ_T0088790.1 MGP_LPJ_G0033570.1 mouse_genomes_project 8 69020742 69056678 + MGP_LPJ_P0088790 Ints10 protein_coding protein_coding MGP_LPJ_T0088791.1 MGP_LPJ_G0033570.1 mouse_genomes_project 8 69020760 69025495 + Ints10 protein_coding retained_intron MGP_LPJ_T0088792.1 MGP_LPJ_G0033570.1 mouse_genomes_project 8 69020801 69056678 + MGP_LPJ_P0088792 Ints10 protein_coding protein_coding MGP_LPJ_T0088793.1 MGP_LPJ_G0033570.1 mouse_genomes_project 8 69039462 69042112 + Ints10 protein_coding retained_intron MGP_LPJ_T0088794.1 MGP_LPJ_G0033570.1 mouse_genomes_project 8 69048189 69054788 + MGP_LPJ_P0088794 Ints10 protein_coding protein_coding MGP_LPJ_T0090520.1 MGP_LPJ_G0034122.1 mouse_genomes_project 8 125594416 125641179 + MGP_LPJ_P0090520 Banp protein_coding protein_coding MGP_LPJ_T0090521.1 MGP_LPJ_G0034122.1 mouse_genomes_project 8 125595158 125669942 + MGP_LPJ_P0090521 Banp protein_coding protein_coding MGP_LPJ_T0090522.1 MGP_LPJ_G0034122.1 mouse_genomes_project 8 125595210 125673059 + MGP_LPJ_P0090522 Banp protein_coding protein_coding MGP_LPJ_T0090523.1 MGP_LPJ_G0034122.1 mouse_genomes_project 8 125595241 125641177 + MGP_LPJ_P0090523 Banp protein_coding nonsense_mediated_decay MGP_LPJ_T0090524.1 MGP_LPJ_G0034122.1 mouse_genomes_project 8 125595246 125669708 + MGP_LPJ_P0090524 Banp protein_coding protein_coding MGP_LPJ_T0090525.1 MGP_LPJ_G0034122.1 mouse_genomes_project 8 125595251 125635562 + MGP_LPJ_P0090525 Banp protein_coding protein_coding MGP_LPJ_T0090526.1 MGP_LPJ_G0034122.1 mouse_genomes_project 8 125595262 125635553 + MGP_LPJ_P0090526 Banp protein_coding nonsense_mediated_decay MGP_LPJ_T0090527.1 MGP_LPJ_G0034122.1 mouse_genomes_project 8 125595271 125635579 + MGP_LPJ_P0090527 Banp protein_coding protein_coding MGP_LPJ_T0090528.1 MGP_LPJ_G0034122.1 mouse_genomes_project 8 125618719 125620773 + Banp protein_coding retained_intron MGP_LPJ_T0090529.1 MGP_LPJ_G0034122.1 mouse_genomes_project 8 125618767 125669406 + MGP_LPJ_P0090529 Banp protein_coding protein_coding MGP_LPJ_T0090530.1 MGP_LPJ_G0034122.1 mouse_genomes_project 8 125622607 125633995 + Banp protein_coding retained_intron MGP_LPJ_T0090531.1 MGP_LPJ_G0034122.1 mouse_genomes_project 8 125635450 125641234 + Banp protein_coding retained_intron MGP_LPJ_T0090532.1 MGP_LPJ_G0034122.1 mouse_genomes_project 8 125635596 125669723 + MGP_LPJ_P0090532 Banp protein_coding protein_coding MGP_LPJ_T0090533.1 MGP_LPJ_G0034122.1 mouse_genomes_project 8 125641084 125669378 + MGP_LPJ_P0090533 Banp protein_coding protein_coding MGP_LPJ_T0090534.1 MGP_LPJ_G0034122.1 mouse_genomes_project 8 125644663 125664412 + Banp protein_coding processed_transcript MGP_LPJ_T0090535.1 MGP_LPJ_G0034122.1 mouse_genomes_project 8 125644841 125651124 + Banp protein_coding retained_intron MGP_LPJ_T0098065.1 MGP_LPJ_G0036346.1 mouse_genomes_project 8 120006970 120008306 - pseudogene pseudogene MGP_LPJ_T0101059.1 MGP_LPJ_G0039322.1 mouse_genomes_project 8 113722244 113722320 - Gm22193 snoRNA snoRNA MGP_LPJ_T0089186.1 MGP_LPJ_G0033685.1 mouse_genomes_project 8 72806282 72824092 + MGP_LPJ_P0089186 Ap1m1 protein_coding protein_coding MGP_LPJ_T0089187.1 MGP_LPJ_G0033685.1 mouse_genomes_project 8 72806374 72815394 + MGP_LPJ_P0089187 Ap1m1 protein_coding protein_coding MGP_LPJ_T0089188.1 MGP_LPJ_G0033685.1 mouse_genomes_project 8 72806587 72818686 + MGP_LPJ_P0089188 Ap1m1 protein_coding protein_coding MGP_LPJ_T0089189.1 MGP_LPJ_G0033685.1 mouse_genomes_project 8 72819725 72823279 + Ap1m1 protein_coding retained_intron MGP_LPJ_T0089190.1 MGP_LPJ_G0033685.1 mouse_genomes_project 8 72819805 72823618 + Ap1m1 protein_coding retained_intron MGP_LPJ_T0089507.1 MGP_LPJ_G0033786.1 mouse_genomes_project 8 85946431 85949342 + MGP_LPJ_P0089507 Dnase2a protein_coding protein_coding MGP_LPJ_T0089508.1 MGP_LPJ_G0033786.1 mouse_genomes_project 8 85946431 85949581 + MGP_LPJ_P0089508 Dnase2a protein_coding protein_coding MGP_LPJ_T0089509.1 MGP_LPJ_G0033786.1 mouse_genomes_project 8 85946518 85947072 + Dnase2a protein_coding retained_intron MGP_LPJ_T0089510.1 MGP_LPJ_G0033786.1 mouse_genomes_project 8 85946518 85947340 + Dnase2a protein_coding retained_intron MGP_LPJ_T0089511.1 MGP_LPJ_G0033786.1 mouse_genomes_project 8 85946561 85947797 + MGP_LPJ_P0089511 Dnase2a protein_coding protein_coding MGP_LPJ_T0089512.1 MGP_LPJ_G0033786.1 mouse_genomes_project 8 85946592 85952352 + Dnase2a protein_coding processed_transcript MGP_LPJ_T0089513.1 MGP_LPJ_G0033786.1 mouse_genomes_project 8 85946602 85947836 + MGP_LPJ_P0089513 Dnase2a protein_coding protein_coding MGP_LPJ_T0089514.1 MGP_LPJ_G0033786.1 mouse_genomes_project 8 85947706 85949334 + Dnase2a protein_coding processed_transcript MGP_LPJ_T0089519.1 MGP_LPJ_G0033786.1 mouse_genomes_project 8 85951263 85960744 + Dnase2a protein_coding processed_transcript MGP_LPJ_T0088329.1 MGP_LPJ_G0033432.1 mouse_genomes_project 8 31923293 31963451 + MGP_LPJ_P0088329 Tex15 protein_coding protein_coding MGP_LPJ_T0088330.1 MGP_LPJ_G0033432.1 mouse_genomes_project 8 31923877 31994377 + MGP_LPJ_P0088330 Tex15 protein_coding nonsense_mediated_decay MGP_LPJ_T0088331.1 MGP_LPJ_G0033432.1 mouse_genomes_project 8 31923877 31981067 + MGP_LPJ_P0088331 Tex15 protein_coding protein_coding MGP_LPJ_T0088332.1 MGP_LPJ_G0033432.1 mouse_genomes_project 8 31978052 31994377 + MGP_LPJ_P0088332 Tex15 protein_coding protein_coding MGP_LPJ_T0089414.1 MGP_LPJ_G0033765.1 mouse_genomes_project 8 85157019 85159850 - MGP_LPJ_P0089414 Nanos3 protein_coding protein_coding MGP_LPJ_T0101017.1 MGP_LPJ_G0039280.1 mouse_genomes_project 8 23651276 23651407 - Gm23184 snoRNA snoRNA MGP_LPJ_T0090552.1 MGP_LPJ_G0034127.1 mouse_genomes_project 8 126089052 126097221 - MGP_LPJ_P0090552 Cyba protein_coding protein_coding MGP_LPJ_T0088103.1 MGP_LPJ_G0033354.1 mouse_genomes_project 8 19965757 20007278 - MGP_LPJ_P0088103 Nek3 protein_coding protein_coding MGP_LPJ_T0088104.1 MGP_LPJ_G0033354.1 mouse_genomes_project 8 19965757 20007301 - MGP_LPJ_P0088104 Nek3 protein_coding protein_coding MGP_LPJ_T0088105.1 MGP_LPJ_G0033354.1 mouse_genomes_project 8 19965760 20001333 - MGP_LPJ_P0088105 Nek3 protein_coding protein_coding MGP_LPJ_T0088106.1 MGP_LPJ_G0033354.1 mouse_genomes_project 8 19966160 19969795 - Nek3 protein_coding retained_intron MGP_LPJ_T0088280.1 MGP_LPJ_G0033406.1 mouse_genomes_project 8 24233239 24237968 + MGP_LPJ_P0088280 Thap1 protein_coding protein_coding MGP_LPJ_T0088281.1 MGP_LPJ_G0033406.1 mouse_genomes_project 8 24233260 24237803 + MGP_LPJ_P0088281 Thap1 protein_coding protein_coding MGP_LPJ_T0088282.1 MGP_LPJ_G0033406.1 mouse_genomes_project 8 24233282 24234440 + Thap1 protein_coding retained_intron MGP_LPJ_T0089038.1 MGP_LPJ_G0033645.1 mouse_genomes_project 8 71588635 71615131 - MGP_LPJ_P0089038 Haus8 protein_coding nonsense_mediated_decay MGP_LPJ_T0089039.1 MGP_LPJ_G0033645.1 mouse_genomes_project 8 71591401 71615604 - MGP_LPJ_P0089039 Haus8 protein_coding protein_coding MGP_LPJ_T0089040.1 MGP_LPJ_G0033645.1 mouse_genomes_project 8 71591401 71615047 - MGP_LPJ_P0089040 Haus8 protein_coding protein_coding MGP_LPJ_T0089041.1 MGP_LPJ_G0033645.1 mouse_genomes_project 8 71595709 71615131 - Haus8 protein_coding processed_transcript MGP_LPJ_T0089042.1 MGP_LPJ_G0033645.1 mouse_genomes_project 8 71596304 71596920 - Haus8 protein_coding retained_intron MGP_LPJ_T0089043.1 MGP_LPJ_G0033645.1 mouse_genomes_project 8 71596331 71615149 - Haus8 protein_coding processed_transcript MGP_LPJ_T0089044.1 MGP_LPJ_G0033645.1 mouse_genomes_project 8 71597304 71615113 - Haus8 protein_coding retained_intron MGP_LPJ_T0089045.1 MGP_LPJ_G0033645.1 mouse_genomes_project 8 71602565 71615029 - Haus8 protein_coding processed_transcript MGP_LPJ_T0089084.1 MGP_LPJ_G0033655.1 mouse_genomes_project 8 71842144 71845200 + Dda1 protein_coding processed_transcript MGP_LPJ_T0089085.1 MGP_LPJ_G0033655.1 mouse_genomes_project 8 71842144 71849054 + Dda1 protein_coding processed_transcript MGP_LPJ_T0089086.1 MGP_LPJ_G0033655.1 mouse_genomes_project 8 71842144 71845329 + Dda1 protein_coding retained_intron MGP_LPJ_T0089087.1 MGP_LPJ_G0033655.1 mouse_genomes_project 8 71842144 71849054 + Dda1 protein_coding processed_transcript MGP_LPJ_T0089088.1 MGP_LPJ_G0033655.1 mouse_genomes_project 8 71842144 71849054 + MGP_LPJ_P0089088 Dda1 protein_coding protein_coding MGP_LPJ_T0089089.1 MGP_LPJ_G0033655.1 mouse_genomes_project 8 71842144 71849054 + MGP_LPJ_P0089089 Dda1 protein_coding protein_coding MGP_LPJ_T0089090.1 MGP_LPJ_G0033655.1 mouse_genomes_project 8 71842150 71849054 + MGP_LPJ_P0089090 Dda1 protein_coding protein_coding MGP_LPJ_T0089091.1 MGP_LPJ_G0033655.1 mouse_genomes_project 8 71842156 71845736 + Dda1 protein_coding retained_intron MGP_LPJ_T0089092.1 MGP_LPJ_G0033655.1 mouse_genomes_project 8 71842156 71847930 + Dda1 protein_coding retained_intron MGP_LPJ_T0089093.1 MGP_LPJ_G0033655.1 mouse_genomes_project 8 71842230 71845569 + Dda1 protein_coding retained_intron MGP_LPJ_T0089094.1 MGP_LPJ_G0033655.1 mouse_genomes_project 8 71843355 71849054 + Dda1 protein_coding processed_transcript MGP_LPJ_T0089325.1 MGP_LPJ_G0033734.1 mouse_genomes_project 8 84081145 84197133 + MGP_LPJ_P0089325 Tbc1d9 protein_coding protein_coding MGP_LPJ_T0089326.1 MGP_LPJ_G0033734.1 mouse_genomes_project 8 84081653 84197646 + MGP_LPJ_P0089326 Tbc1d9 protein_coding protein_coding MGP_LPJ_T0089327.1 MGP_LPJ_G0033734.1 mouse_genomes_project 8 84184018 84195660 + Tbc1d9 protein_coding retained_intron MGP_LPJ_T0090040.1 MGP_LPJ_G0033965.1 mouse_genomes_project 8 108351920 108373865 + MGP_LPJ_P0090040 Tsnaxip1 protein_coding protein_coding MGP_LPJ_T0089075.1 MGP_LPJ_G0033650.1 mouse_genomes_project 8 71751592 71763422 - MGP_LPJ_P0089075 Ushbp1 protein_coding protein_coding MGP_LPJ_T0090497.1 MGP_LPJ_G0034117.1 mouse_genomes_project 8 125242620 125246754 - MGP_LPJ_P0090497 Zcchc14 protein_coding protein_coding MGP_LPJ_T0090498.1 MGP_LPJ_G0034117.1 mouse_genomes_project 8 125245445 125309248 - MGP_LPJ_P0090498 Zcchc14 protein_coding protein_coding MGP_LPJ_T0090499.1 MGP_LPJ_G0034117.1 mouse_genomes_project 8 125248453 125249458 - Zcchc14 protein_coding retained_intron MGP_LPJ_T0090500.1 MGP_LPJ_G0034117.1 mouse_genomes_project 8 125257252 125285621 - Zcchc14 protein_coding retained_intron MGP_LPJ_T0009118.1 MGP_LPJ_G0007333.1 mouse_genomes_project 8 57225228 57248780 + 2500002B13Rik lincRNA lincRNA MGP_LPJ_T0005397.1 MGP_LPJ_G0004574.1 mouse_genomes_project 8 81323498 81326130 - 4930505O20Rik antisense antisense MGP_LPJ_T0087948.1 MGP_LPJ_G0033286.1 mouse_genomes_project 8 10344122 10388017 + MGP_LPJ_P0087948 Cul4a protein_coding protein_coding MGP_LPJ_T0087949.1 MGP_LPJ_G0033286.1 mouse_genomes_project 8 10344241 10362644 + MGP_LPJ_P0087949 Cul4a protein_coding protein_coding MGP_LPJ_T0087950.1 MGP_LPJ_G0033286.1 mouse_genomes_project 8 10344437 10360039 + Cul4a protein_coding retained_intron MGP_LPJ_T0087951.1 MGP_LPJ_G0033286.1 mouse_genomes_project 8 10361946 10387317 + MGP_LPJ_P0087951 Cul4a protein_coding nonsense_mediated_decay MGP_LPJ_T0087952.1 MGP_LPJ_G0033286.1 mouse_genomes_project 8 10379861 10382608 + Cul4a protein_coding retained_intron MGP_LPJ_T0087953.1 MGP_LPJ_G0033286.1 mouse_genomes_project 8 10380321 10386572 + Cul4a protein_coding processed_transcript MGP_LPJ_T0087954.1 MGP_LPJ_G0033286.1 mouse_genomes_project 8 10384277 10388017 + Cul4a protein_coding retained_intron MGP_LPJ_T0009149.1 MGP_LPJ_G0007360.1 mouse_genomes_project 8 88493571 88512112 - Gm27207 lincRNA lincRNA MGP_LPJ_T0089346.1 MGP_LPJ_G0033743.1 mouse_genomes_project 8 84599610 84611551 + MGP_LPJ_P0089346 Gipc1 protein_coding protein_coding MGP_LPJ_T0089339.1 MGP_LPJ_G0033739.1 mouse_genomes_project 8 84482527 84483623 + MGP_LPJ_P0089339 Olfr370 protein_coding protein_coding MGP_LPJ_T0088468.1 MGP_LPJ_G0033474.1 mouse_genomes_project 8 42176537 42187238 + MGP_LPJ_P0088468 Triml2 protein_coding protein_coding MGP_LPJ_T0088741.1 MGP_LPJ_G0033555.1 mouse_genomes_project 8 65056166 65076901 - MGP_LPJ_P0088741 Trim60 protein_coding protein_coding MGP_LPJ_T0101042.1 MGP_LPJ_G0039305.1 mouse_genomes_project 8 73731331 73731471 - Gm22532 snoRNA snoRNA MGP_LPJ_T0090015.1 MGP_LPJ_G0033954.1 mouse_genomes_project 8 108017119 108061272 - MGP_LPJ_P0090015 Atp6v0d1 protein_coding protein_coding MGP_LPJ_T0090016.1 MGP_LPJ_G0033954.1 mouse_genomes_project 8 108023305 108032131 - Atp6v0d1 protein_coding retained_intron MGP_LPJ_T0011005.1 MGP_LPJ_G0009123.1 mouse_genomes_project 8 85163946 85164035 - Mir181c miRNA miRNA MGP_LPJ_T0089478.1 MGP_LPJ_G0033778.1 mouse_genomes_project 8 85864184 85868147 + MGP_LPJ_P0089478 Gadd45gip1 protein_coding protein_coding MGP_LPJ_T0088093.1 MGP_LPJ_G0033349.1 mouse_genomes_project 8 19801493 19807098 + MGP_LPJ_P0088093 Fam90a1a protein_coding protein_coding MGP_LPJ_T0088997.1 MGP_LPJ_G0033620.1 mouse_genomes_project 8 70838768 70895305 + MGP_LPJ_P0088997 Ell protein_coding protein_coding MGP_LPJ_T0088551.1 MGP_LPJ_G0033496.1 mouse_genomes_project 8 45584226 45652354 + MGP_LPJ_P0088551 Acsl1 protein_coding protein_coding MGP_LPJ_T0088552.1 MGP_LPJ_G0033496.1 mouse_genomes_project 8 45584284 45631811 + Acsl1 protein_coding retained_intron MGP_LPJ_T0088553.1 MGP_LPJ_G0033496.1 mouse_genomes_project 8 45584362 45626573 + MGP_LPJ_P0088553 Acsl1 protein_coding protein_coding MGP_LPJ_T0088554.1 MGP_LPJ_G0033496.1 mouse_genomes_project 8 45606161 45651884 + MGP_LPJ_P0088554 Acsl1 protein_coding protein_coding MGP_LPJ_T0088555.1 MGP_LPJ_G0033496.1 mouse_genomes_project 8 45606161 45620894 + MGP_LPJ_P0088555 Acsl1 protein_coding protein_coding MGP_LPJ_T0088556.1 MGP_LPJ_G0033496.1 mouse_genomes_project 8 45608019 45650783 + MGP_LPJ_P0088556 Acsl1 protein_coding protein_coding MGP_LPJ_T0088557.1 MGP_LPJ_G0033496.1 mouse_genomes_project 8 45643090 45644957 + Acsl1 protein_coding retained_intron MGP_LPJ_T0088558.1 MGP_LPJ_G0033496.1 mouse_genomes_project 8 45647368 45650758 + MGP_LPJ_P0088558 Acsl1 protein_coding protein_coding MGP_LPJ_T0090711.1 MGP_LPJ_G0034175.1 mouse_genomes_project 8 128421401 128472193 + MGP_LPJ_P0090711 Capn9 protein_coding protein_coding MGP_LPJ_T0090712.1 MGP_LPJ_G0034175.1 mouse_genomes_project 8 128421403 128440008 + MGP_LPJ_P0090712 Capn9 protein_coding protein_coding MGP_LPJ_T0090713.1 MGP_LPJ_G0034175.1 mouse_genomes_project 8 128465026 128468092 + Capn9 protein_coding processed_transcript MGP_LPJ_T0088767.1 MGP_LPJ_G0033565.1 mouse_genomes_project 8 67687581 67695291 + MGP_LPJ_P0088767 Nat2 protein_coding protein_coding MGP_LPJ_T0088768.1 MGP_LPJ_G0033565.1 mouse_genomes_project 8 67687662 67695295 + MGP_LPJ_P0088768 Nat2 protein_coding protein_coding MGP_LPJ_T0005349.1 MGP_LPJ_G0004537.1 mouse_genomes_project 8 8305649 8322338 + Gm15418 antisense antisense MGP_LPJ_T0088958.1 MGP_LPJ_G0033615.1 mouse_genomes_project 8 70788514 70799457 + MGP_LPJ_P0088958 Crlf1 protein_coding protein_coding MGP_LPJ_T0088959.1 MGP_LPJ_G0033615.1 mouse_genomes_project 8 70788717 70796312 + MGP_LPJ_P0088959 Crlf1 protein_coding protein_coding MGP_LPJ_T0088960.1 MGP_LPJ_G0033615.1 mouse_genomes_project 8 70796514 70799406 + MGP_LPJ_P0088960 Crlf1 protein_coding protein_coding MGP_LPJ_T0089175.1 MGP_LPJ_G0033678.1 mouse_genomes_project 8 72542455 72543615 + MGP_LPJ_P0089175 Olfr373 protein_coding protein_coding MGP_LPJ_T0088082.1 MGP_LPJ_G0033338.1 mouse_genomes_project 8 18736526 18743043 - MGP_LPJ_P0088082 Gm6040 protein_coding protein_coding MGP_LPJ_T0088640.1 MGP_LPJ_G0033526.1 mouse_genomes_project 8 56001934 56031939 + MGP_LPJ_P0088640 Hpgd protein_coding protein_coding MGP_LPJ_T0088482.1 MGP_LPJ_G0033481.1 mouse_genomes_project 8 44322366 44349036 - MGP_LPJ_P0088482 Klkb1 protein_coding protein_coding MGP_LPJ_T0087812.1 MGP_LPJ_G0033246.1 mouse_genomes_project 8 1158624 1161742 + MGP_LPJ_P0087812 Snapc2 protein_coding protein_coding MGP_LPJ_T0101047.1 MGP_LPJ_G0039310.1 mouse_genomes_project 8 86099893 86099963 + Gm25506 snoRNA snoRNA MGP_LPJ_T0089593.1 MGP_LPJ_G0033809.1 mouse_genomes_project 8 86546731 86583823 + MGP_LPJ_P0089593 Gpt2 protein_coding protein_coding MGP_LPJ_T0089594.1 MGP_LPJ_G0033809.1 mouse_genomes_project 8 86546762 86581078 + MGP_LPJ_P0089594 Gpt2 protein_coding nonsense_mediated_decay MGP_LPJ_T0089595.1 MGP_LPJ_G0033809.1 mouse_genomes_project 8 86546764 86547463 + Gpt2 protein_coding processed_transcript MGP_LPJ_T0089596.1 MGP_LPJ_G0033809.1 mouse_genomes_project 8 86572144 86577742 + Gpt2 protein_coding retained_intron MGP_LPJ_T0089597.1 MGP_LPJ_G0033809.1 mouse_genomes_project 8 86575664 86581956 + Gpt2 protein_coding processed_transcript MGP_LPJ_T0088428.1 MGP_LPJ_G0033463.1 mouse_genomes_project 8 39336065 39376418 + MGP_LPJ_P0088428 Vps37a protein_coding protein_coding MGP_LPJ_T0089004.1 MGP_LPJ_G0033626.1 mouse_genomes_project 8 70983393 70988919 + MGP_LPJ_P0089004 Lsm4 protein_coding protein_coding MGP_LPJ_T0089005.1 MGP_LPJ_G0033626.1 mouse_genomes_project 8 70983577 70988215 + MGP_LPJ_P0089005 Lsm4 protein_coding protein_coding MGP_LPJ_T0089006.1 MGP_LPJ_G0033626.1 mouse_genomes_project 8 70987831 70988283 + Lsm4 protein_coding retained_intron MGP_LPJ_T0088207.1 MGP_LPJ_G0033388.1 mouse_genomes_project 8 23027829 23095341 - MGP_LPJ_P0088207 Plekha2 protein_coding protein_coding MGP_LPJ_T0088208.1 MGP_LPJ_G0033388.1 mouse_genomes_project 8 23029524 23095132 - MGP_LPJ_P0088208 Plekha2 protein_coding protein_coding MGP_LPJ_T0088209.1 MGP_LPJ_G0033388.1 mouse_genomes_project 8 23031639 23094919 - MGP_LPJ_P0088209 Plekha2 protein_coding protein_coding MGP_LPJ_T0088210.1 MGP_LPJ_G0033388.1 mouse_genomes_project 8 23051569 23082207 - MGP_LPJ_P0088210 Plekha2 protein_coding protein_coding MGP_LPJ_T0090343.1 MGP_LPJ_G0034070.1 mouse_genomes_project 8 120195600 120212617 + MGP_LPJ_P0090343 Atmin protein_coding protein_coding MGP_LPJ_T0088697.1 MGP_LPJ_G0033543.1 mouse_genomes_project 8 61379951 61399081 + MGP_LPJ_P0088697 Cbr4 protein_coding protein_coding MGP_LPJ_T0088698.1 MGP_LPJ_G0033543.1 mouse_genomes_project 8 61379952 61383825 + MGP_LPJ_P0088698 Cbr4 protein_coding protein_coding MGP_LPJ_T0088699.1 MGP_LPJ_G0033543.1 mouse_genomes_project 8 61379972 61384143 + Cbr4 protein_coding retained_intron MGP_LPJ_T0088700.1 MGP_LPJ_G0033543.1 mouse_genomes_project 8 61379986 61398928 + Cbr4 protein_coding retained_intron MGP_LPJ_T0088701.1 MGP_LPJ_G0033543.1 mouse_genomes_project 8 61383647 61398928 + Cbr4 protein_coding retained_intron MGP_LPJ_T0088702.1 MGP_LPJ_G0033543.1 mouse_genomes_project 8 61388831 61398988 + Cbr4 protein_coding retained_intron MGP_LPJ_T0009210.1 MGP_LPJ_G0007400.1 mouse_genomes_project 8 125181998 125186001 + 1700030M09Rik lincRNA lincRNA MGP_LPJ_T0009211.1 MGP_LPJ_G0007400.1 mouse_genomes_project 8 125182004 125185311 + 1700030M09Rik lincRNA lincRNA MGP_LPJ_T0089848.1 MGP_LPJ_G0033889.1 mouse_genomes_project 8 96920607 96923192 + MGP_LPJ_P0089848 Tepp protein_coding protein_coding MGP_LPJ_T0089849.1 MGP_LPJ_G0033889.1 mouse_genomes_project 8 96920627 96933417 + MGP_LPJ_P0089849 Tepp protein_coding protein_coding MGP_LPJ_T0089850.1 MGP_LPJ_G0033889.1 mouse_genomes_project 8 96921639 96934203 + MGP_LPJ_P0089850 Tepp protein_coding protein_coding MGP_LPJ_T0089851.1 MGP_LPJ_G0033889.1 mouse_genomes_project 8 96921643 96934203 + MGP_LPJ_P0089851 Tepp protein_coding protein_coding MGP_LPJ_T0089852.1 MGP_LPJ_G0033889.1 mouse_genomes_project 8 96933311 96939197 + Tepp protein_coding retained_intron MGP_LPJ_T0089853.1 MGP_LPJ_G0033889.1 mouse_genomes_project 8 96933369 96939085 + MGP_LPJ_P0089853 Tepp protein_coding protein_coding MGP_LPJ_T0015942.1 MGP_LPJ_G0014033.1 mouse_genomes_project 8 77461797 77462590 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005350.1 MGP_LPJ_G0004538.1 mouse_genomes_project 8 8521187 8544233 - Gm15419 antisense antisense MGP_LPJ_T0005411.1 MGP_LPJ_G0004586.1 mouse_genomes_project 8 112653060 112661503 - Gm17344 antisense antisense MGP_LPJ_T0005412.1 MGP_LPJ_G0004586.1 mouse_genomes_project 8 112654801 112661526 - Gm17344 antisense antisense MGP_LPJ_T0088675.1 MGP_LPJ_G0033539.1 mouse_genomes_project 8 60742804 60759730 + MGP_LPJ_P0088675 Hpf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0088676.1 MGP_LPJ_G0033539.1 mouse_genomes_project 8 60742831 60759728 + MGP_LPJ_P0088676 Hpf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0088677.1 MGP_LPJ_G0033539.1 mouse_genomes_project 8 60742837 60759735 + MGP_LPJ_P0088677 Hpf1 protein_coding protein_coding MGP_LPJ_T0088678.1 MGP_LPJ_G0033539.1 mouse_genomes_project 8 60742837 60758140 + MGP_LPJ_P0088678 Hpf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0088679.1 MGP_LPJ_G0033539.1 mouse_genomes_project 8 60742875 60749439 + Hpf1 protein_coding retained_intron MGP_LPJ_T0088304.1 MGP_LPJ_G0033418.1 mouse_genomes_project 8 25568538 25579158 - MGP_LPJ_P0088304 Chrna6 protein_coding protein_coding MGP_LPJ_T0005419.1 MGP_LPJ_G0004593.1 mouse_genomes_project 8 117829240 117838809 - Gm16118 antisense antisense MGP_LPJ_T0089342.1 MGP_LPJ_G0033741.1 mouse_genomes_project 8 84515044 84539801 - MGP_LPJ_P0089342 Tecr protein_coding protein_coding MGP_LPJ_T0089343.1 MGP_LPJ_G0033741.1 mouse_genomes_project 8 84515044 84539801 - MGP_LPJ_P0089343 Tecr protein_coding protein_coding MGP_LPJ_T0089344.1 MGP_LPJ_G0033741.1 mouse_genomes_project 8 84515044 84539739 - MGP_LPJ_P0089344 Tecr protein_coding protein_coding MGP_LPJ_T0090259.1 MGP_LPJ_G0034042.1 mouse_genomes_project 8 114245399 114276004 - MGP_LPJ_P0090259 Mlkl protein_coding protein_coding MGP_LPJ_T0090260.1 MGP_LPJ_G0034042.1 mouse_genomes_project 8 114245402 114276004 - MGP_LPJ_P0090260 Mlkl protein_coding protein_coding MGP_LPJ_T0090261.1 MGP_LPJ_G0034042.1 mouse_genomes_project 8 114245404 114252086 - Mlkl protein_coding processed_transcript MGP_LPJ_T0090262.1 MGP_LPJ_G0034042.1 mouse_genomes_project 8 114269646 114275620 - MGP_LPJ_P0090262 Mlkl protein_coding protein_coding MGP_LPJ_T0090583.1 MGP_LPJ_G0034139.1 mouse_genomes_project 8 126316019 126393766 - MGP_LPJ_P0090583 Cbfa2t3 protein_coding protein_coding MGP_LPJ_T0090584.1 MGP_LPJ_G0034139.1 mouse_genomes_project 8 126316746 126370631 - MGP_LPJ_P0090584 Cbfa2t3 protein_coding protein_coding MGP_LPJ_T0090585.1 MGP_LPJ_G0034139.1 mouse_genomes_project 8 126317220 126370734 - MGP_LPJ_P0090585 Cbfa2t3 protein_coding protein_coding MGP_LPJ_T0090586.1 MGP_LPJ_G0034139.1 mouse_genomes_project 8 126329074 126371253 - MGP_LPJ_P0090586 Cbfa2t3 protein_coding protein_coding MGP_LPJ_T0090587.1 MGP_LPJ_G0034139.1 mouse_genomes_project 8 126329078 126337876 - Cbfa2t3 protein_coding processed_transcript MGP_LPJ_T0090588.1 MGP_LPJ_G0034139.1 mouse_genomes_project 8 126333064 126370670 - Cbfa2t3 protein_coding processed_transcript MGP_LPJ_T0090589.1 MGP_LPJ_G0034139.1 mouse_genomes_project 8 126341421 126393559 - Cbfa2t3 protein_coding retained_intron MGP_LPJ_T0089879.1 MGP_LPJ_G0033900.1 mouse_genomes_project 8 97357492 97451784 - MGP_LPJ_P0089879 Cnot1 protein_coding protein_coding MGP_LPJ_T0089880.1 MGP_LPJ_G0033900.1 mouse_genomes_project 8 97357492 97451784 - MGP_LPJ_P0089880 Cnot1 protein_coding protein_coding MGP_LPJ_T0088142.1 MGP_LPJ_G0033370.1 mouse_genomes_project 8 20848973 21040725 + MGP_LPJ_P0088142 Ank1 protein_coding protein_coding MGP_LPJ_T0088143.1 MGP_LPJ_G0033370.1 mouse_genomes_project 8 20849011 21041285 + MGP_LPJ_P0088143 Ank1 protein_coding protein_coding MGP_LPJ_T0088144.1 MGP_LPJ_G0033370.1 mouse_genomes_project 8 20849265 21039099 + MGP_LPJ_P0088144 Ank1 protein_coding protein_coding MGP_LPJ_T0088145.1 MGP_LPJ_G0033370.1 mouse_genomes_project 8 20913137 21039582 + MGP_LPJ_P0088145 Ank1 protein_coding protein_coding MGP_LPJ_T0088146.1 MGP_LPJ_G0033370.1 mouse_genomes_project 8 20913166 21040073 + MGP_LPJ_P0088146 Ank1 protein_coding protein_coding MGP_LPJ_T0088147.1 MGP_LPJ_G0033370.1 mouse_genomes_project 8 20913269 21040073 + MGP_LPJ_P0088147 Ank1 protein_coding protein_coding MGP_LPJ_T0088148.1 MGP_LPJ_G0033370.1 mouse_genomes_project 8 20938548 21041288 + MGP_LPJ_P0088148 Ank1 protein_coding nonsense_mediated_decay MGP_LPJ_T0088149.1 MGP_LPJ_G0033370.1 mouse_genomes_project 8 20938564 21041288 + MGP_LPJ_P0088149 Ank1 protein_coding protein_coding MGP_LPJ_T0088150.1 MGP_LPJ_G0033370.1 mouse_genomes_project 8 20938600 21041288 + MGP_LPJ_P0088150 Ank1 protein_coding protein_coding MGP_LPJ_T0088151.1 MGP_LPJ_G0033370.1 mouse_genomes_project 8 20938814 21040480 + MGP_LPJ_P0088151 Ank1 protein_coding nonsense_mediated_decay MGP_LPJ_T0088152.1 MGP_LPJ_G0033370.1 mouse_genomes_project 8 20938814 21040480 + MGP_LPJ_P0088152 Ank1 protein_coding protein_coding MGP_LPJ_T0088153.1 MGP_LPJ_G0033370.1 mouse_genomes_project 8 20976703 21008557 + MGP_LPJ_P0088153 Ank1 protein_coding protein_coding MGP_LPJ_T0088154.1 MGP_LPJ_G0033370.1 mouse_genomes_project 8 21005859 21011991 + Ank1 protein_coding retained_intron MGP_LPJ_T0088155.1 MGP_LPJ_G0033370.1 mouse_genomes_project 8 21026090 21040071 + MGP_LPJ_P0088155 Ank1 protein_coding protein_coding MGP_LPJ_T0088156.1 MGP_LPJ_G0033370.1 mouse_genomes_project 8 21026165 21039486 + MGP_LPJ_P0088156 Ank1 protein_coding protein_coding MGP_LPJ_T0088157.1 MGP_LPJ_G0033370.1 mouse_genomes_project 8 21026337 21039097 + MGP_LPJ_P0088157 Ank1 protein_coding protein_coding MGP_LPJ_T0088158.1 MGP_LPJ_G0033370.1 mouse_genomes_project 8 21027156 21039161 + Ank1 protein_coding retained_intron MGP_LPJ_T0087795.1 MGP_LPJ_G0033242.1 mouse_genomes_project 8 1111395 1118662 - MGP_LPJ_P0087795 Prr36 protein_coding protein_coding MGP_LPJ_T0087796.1 MGP_LPJ_G0033242.1 mouse_genomes_project 8 1116398 1118262 - MGP_LPJ_P0087796 Prr36 protein_coding protein_coding MGP_LPJ_T0087797.1 MGP_LPJ_G0033242.1 mouse_genomes_project 8 1117321 1118502 - MGP_LPJ_P0087797 Prr36 protein_coding protein_coding MGP_LPJ_T0087798.1 MGP_LPJ_G0033242.1 mouse_genomes_project 8 1117757 1118809 - MGP_LPJ_P0087798 Prr36 protein_coding protein_coding MGP_LPJ_T0088810.1 MGP_LPJ_G0033574.1 mouse_genomes_project 8 69412260 69478206 - MGP_LPJ_P0088810 Lzts1 protein_coding protein_coding MGP_LPJ_T0088811.1 MGP_LPJ_G0033574.1 mouse_genomes_project 8 69415087 69420545 - MGP_LPJ_P0088811 Lzts1 protein_coding protein_coding MGP_LPJ_T0088812.1 MGP_LPJ_G0033574.1 mouse_genomes_project 8 69459908 69478196 - Lzts1 protein_coding processed_transcript MGP_LPJ_T0088813.1 MGP_LPJ_G0033574.1 mouse_genomes_project 8 69476072 69478186 - Lzts1 protein_coding processed_transcript MGP_LPJ_T0088814.1 MGP_LPJ_G0033574.1 mouse_genomes_project 8 69477692 69478170 - Lzts1 protein_coding retained_intron MGP_LPJ_T0089947.1 MGP_LPJ_G0033930.1 mouse_genomes_project 8 107450723 107472374 + MGP_LPJ_P0089947 protein_coding protein_coding MGP_LPJ_T0011025.1 MGP_LPJ_G0009143.1 mouse_genomes_project 8 107783888 107783997 - Gm27320 miRNA miRNA MGP_LPJ_T0098058.1 MGP_LPJ_G0036339.1 mouse_genomes_project 8 6930534 6930884 - pseudogene pseudogene MGP_LPJ_T0011740.1 MGP_LPJ_G0009858.1 mouse_genomes_project 8 107679030 107679119 + Gm24629 misc_RNA misc_RNA MGP_LPJ_T0088888.1 MGP_LPJ_G0033602.1 mouse_genomes_project 8 70460265 70469443 + Tmem161a protein_coding processed_transcript MGP_LPJ_T0088889.1 MGP_LPJ_G0033602.1 mouse_genomes_project 8 70460314 70472180 + MGP_LPJ_P0088889 Tmem161a protein_coding nonsense_mediated_decay MGP_LPJ_T0088890.1 MGP_LPJ_G0033602.1 mouse_genomes_project 8 70460322 70471388 + MGP_LPJ_P0088890 Tmem161a protein_coding nonsense_mediated_decay MGP_LPJ_T0088891.1 MGP_LPJ_G0033602.1 mouse_genomes_project 8 70460325 70464723 + Tmem161a protein_coding retained_intron MGP_LPJ_T0088892.1 MGP_LPJ_G0033602.1 mouse_genomes_project 8 70460325 70464997 + Tmem161a protein_coding processed_transcript MGP_LPJ_T0088893.1 MGP_LPJ_G0033602.1 mouse_genomes_project 8 70460328 70469251 + MGP_LPJ_P0088893 Tmem161a protein_coding protein_coding MGP_LPJ_T0088894.1 MGP_LPJ_G0033602.1 mouse_genomes_project 8 70460347 70471369 + MGP_LPJ_P0088894 Tmem161a protein_coding protein_coding MGP_LPJ_T0088895.1 MGP_LPJ_G0033602.1 mouse_genomes_project 8 70462185 70471380 + MGP_LPJ_P0088895 Tmem161a protein_coding protein_coding MGP_LPJ_T0088896.1 MGP_LPJ_G0033602.1 mouse_genomes_project 8 70464412 70465130 + Tmem161a protein_coding retained_intron MGP_LPJ_T0088897.1 MGP_LPJ_G0033602.1 mouse_genomes_project 8 70464807 70466498 + Tmem161a protein_coding processed_transcript MGP_LPJ_T0088898.1 MGP_LPJ_G0033602.1 mouse_genomes_project 8 70465058 70469725 + MGP_LPJ_P0088898 Tmem161a protein_coding nonsense_mediated_decay MGP_LPJ_T0088899.1 MGP_LPJ_G0033602.1 mouse_genomes_project 8 70466340 70469826 + Tmem161a protein_coding retained_intron MGP_LPJ_T0088900.1 MGP_LPJ_G0033602.1 mouse_genomes_project 8 70469051 70470545 + Tmem161a protein_coding retained_intron MGP_LPJ_T0090042.1 MGP_LPJ_G0033967.1 mouse_genomes_project 8 108384076 108385924 + MGP_LPJ_P0090042 Thap11 protein_coding protein_coding MGP_LPJ_T0005418.1 MGP_LPJ_G0004592.1 mouse_genomes_project 8 117766747 117769316 - Gm16117 antisense antisense MGP_LPJ_T0009097.1 MGP_LPJ_G0007316.1 mouse_genomes_project 8 26817007 26828438 + lincRNA lincRNA MGP_LPJ_T0009098.1 MGP_LPJ_G0007316.1 mouse_genomes_project 8 26817034 26817811 + lincRNA lincRNA MGP_LPJ_T0011040.1 MGP_LPJ_G0009158.1 mouse_genomes_project 8 120772353 120772417 + Mir7078 miRNA miRNA MGP_LPJ_T0087761.1 MGP_LPJ_G0033229.1 mouse_genomes_project 8 585646 590002 + MGP_LPJ_P0087761 Retn protein_coding protein_coding MGP_LPJ_T0087762.1 MGP_LPJ_G0033229.1 mouse_genomes_project 8 585646 587973 + MGP_LPJ_P0087762 Retn protein_coding protein_coding MGP_LPJ_T0089417.1 MGP_LPJ_G0033768.1 mouse_genomes_project 8 85242522 85249937 - MGP_LPJ_P0089417 Mri1 protein_coding protein_coding MGP_LPJ_T0089418.1 MGP_LPJ_G0033768.1 mouse_genomes_project 8 85243637 85249026 - MGP_LPJ_P0089418 Mri1 protein_coding protein_coding MGP_LPJ_T0089419.1 MGP_LPJ_G0033768.1 mouse_genomes_project 8 85246531 85249860 - MGP_LPJ_P0089419 Mri1 protein_coding nonsense_mediated_decay MGP_LPJ_T0089420.1 MGP_LPJ_G0033768.1 mouse_genomes_project 8 85246845 85249939 - Mri1 protein_coding processed_transcript MGP_LPJ_T0089421.1 MGP_LPJ_G0033768.1 mouse_genomes_project 8 85248402 85249939 - Mri1 protein_coding retained_intron MGP_LPJ_T0090608.1 MGP_LPJ_G0034144.1 mouse_genomes_project 8 126829685 126832582 + MGP_LPJ_P0090608 Rpl13 protein_coding protein_coding MGP_LPJ_T0090609.1 MGP_LPJ_G0034144.1 mouse_genomes_project 8 126829986 126830977 + Rpl13 protein_coding retained_intron MGP_LPJ_T0090610.1 MGP_LPJ_G0034144.1 mouse_genomes_project 8 126829988 126831798 + Rpl13 protein_coding retained_intron MGP_LPJ_T0090611.1 MGP_LPJ_G0034144.1 mouse_genomes_project 8 126829988 126832582 + Rpl13 protein_coding retained_intron MGP_LPJ_T0089950.1 MGP_LPJ_G0033932.1 mouse_genomes_project 8 107531267 107615315 + MGP_LPJ_P0089950 Ces4a protein_coding unknown_likely_coding MGP_LPJ_T0089951.1 MGP_LPJ_G0033932.1 mouse_genomes_project 8 107589204 107615904 + MGP_LPJ_P0089951 Ces4a protein_coding protein_coding MGP_LPJ_T0087962.1 MGP_LPJ_G0033290.1 mouse_genomes_project 8 10500135 10533912 - MGP_LPJ_P0087962 Dcun1d2 protein_coding protein_coding MGP_LPJ_T0087963.1 MGP_LPJ_G0033290.1 mouse_genomes_project 8 10500143 10534230 - MGP_LPJ_P0087963 Dcun1d2 protein_coding protein_coding MGP_LPJ_T0087964.1 MGP_LPJ_G0033290.1 mouse_genomes_project 8 10500144 10533936 - MGP_LPJ_P0087964 Dcun1d2 protein_coding nonsense_mediated_decay MGP_LPJ_T0087965.1 MGP_LPJ_G0033290.1 mouse_genomes_project 8 10500145 10534229 - Dcun1d2 protein_coding processed_transcript MGP_LPJ_T0087966.1 MGP_LPJ_G0033290.1 mouse_genomes_project 8 10504098 10533939 - MGP_LPJ_P0087966 Dcun1d2 protein_coding protein_coding MGP_LPJ_T0087967.1 MGP_LPJ_G0033290.1 mouse_genomes_project 8 10522893 10526020 - Dcun1d2 protein_coding retained_intron MGP_LPJ_T0089124.1 MGP_LPJ_G0033666.1 mouse_genomes_project 8 71996268 72010049 + MGP_LPJ_P0089124 Colgalt1 protein_coding protein_coding MGP_LPJ_T0101064.1 MGP_LPJ_G0039327.1 mouse_genomes_project 8 122137902 122137990 + Gm22999 snoRNA snoRNA MGP_LPJ_T0101036.1 MGP_LPJ_G0039299.1 mouse_genomes_project 8 65991310 65991445 + Gm26123 snoRNA snoRNA MGP_LPJ_T0089711.1 MGP_LPJ_G0033843.1 mouse_genomes_project 8 94256074 94290857 + MGP_LPJ_P0089711 Mmp2 protein_coding protein_coding MGP_LPJ_T0089097.1 MGP_LPJ_G0033657.1 mouse_genomes_project 8 71861957 71867271 + MGP_LPJ_P0089097 Gtpbp3 protein_coding protein_coding MGP_LPJ_T0089098.1 MGP_LPJ_G0033657.1 mouse_genomes_project 8 71861957 71867271 + MGP_LPJ_P0089098 Gtpbp3 protein_coding protein_coding MGP_LPJ_T0089099.1 MGP_LPJ_G0033657.1 mouse_genomes_project 8 71862575 71867271 + MGP_LPJ_P0089099 Gtpbp3 protein_coding nonsense_mediated_decay MGP_LPJ_T0089100.1 MGP_LPJ_G0033657.1 mouse_genomes_project 8 71862582 71874997 + MGP_LPJ_P0089100 Gtpbp3 protein_coding nonsense_mediated_decay MGP_LPJ_T0089101.1 MGP_LPJ_G0033657.1 mouse_genomes_project 8 71862588 71863435 + Gtpbp3 protein_coding retained_intron MGP_LPJ_T0089102.1 MGP_LPJ_G0033657.1 mouse_genomes_project 8 71862597 71867271 + Gtpbp3 protein_coding retained_intron MGP_LPJ_T0089103.1 MGP_LPJ_G0033657.1 mouse_genomes_project 8 71862605 71867271 + MGP_LPJ_P0089103 Gtpbp3 protein_coding nonsense_mediated_decay MGP_LPJ_T0089104.1 MGP_LPJ_G0033657.1 mouse_genomes_project 8 71863315 71865276 + Gtpbp3 protein_coding retained_intron MGP_LPJ_T0088483.1 MGP_LPJ_G0033482.1 mouse_genomes_project 8 44322595 44364057 - MGP_LPJ_P0088483 Cyp4v3 protein_coding nonsense_mediated_decay MGP_LPJ_T0088484.1 MGP_LPJ_G0033482.1 mouse_genomes_project 8 44360536 44392872 - MGP_LPJ_P0088484 Cyp4v3 protein_coding protein_coding MGP_LPJ_T0009125.1 MGP_LPJ_G0007339.1 mouse_genomes_project 8 71099616 71100625 + 2010320M18Rik lincRNA lincRNA MGP_LPJ_T0089046.1 MGP_LPJ_G0033646.1 mouse_genomes_project 8 71615384 71727951 + MGP_LPJ_P0089046 Myo9b protein_coding protein_coding MGP_LPJ_T0089047.1 MGP_LPJ_G0033646.1 mouse_genomes_project 8 71615384 71727951 + MGP_LPJ_P0089047 Myo9b protein_coding protein_coding MGP_LPJ_T0089048.1 MGP_LPJ_G0033646.1 mouse_genomes_project 8 71615384 71727951 + MGP_LPJ_P0089048 Myo9b protein_coding protein_coding MGP_LPJ_T0089049.1 MGP_LPJ_G0033646.1 mouse_genomes_project 8 71615441 71708199 + MGP_LPJ_P0089049 Myo9b protein_coding unknown_likely_coding MGP_LPJ_T0089050.1 MGP_LPJ_G0033646.1 mouse_genomes_project 8 71708783 71727216 + MGP_LPJ_P0089050 Myo9b protein_coding unknown_likely_coding MGP_LPJ_T0088763.1 MGP_LPJ_G0033561.1 mouse_genomes_project 8 66797838 66805906 - MGP_LPJ_P0088763 Npy5r protein_coding protein_coding MGP_LPJ_T0009215.1 MGP_LPJ_G0007403.1 mouse_genomes_project 8 125501471 125502298 - lincRNA lincRNA MGP_LPJ_T0090727.1 MGP_LPJ_G0034180.1 mouse_genomes_project 8 128663012 128706226 + MGP_LPJ_P0090727 Trim67 protein_coding protein_coding MGP_LPJ_T0090728.1 MGP_LPJ_G0034180.1 mouse_genomes_project 8 128663061 128706237 + MGP_LPJ_P0090728 Trim67 protein_coding protein_coding MGP_LPJ_T0090659.1 MGP_LPJ_G0034155.1 mouse_genomes_project 8 127073499 127117566 + MGP_LPJ_P0090659 Spire2 protein_coding protein_coding MGP_LPJ_T0088479.1 MGP_LPJ_G0033479.1 mouse_genomes_project 8 44116888 44136857 + MGP_LPJ_P0088479 Mtnr1a protein_coding protein_coding MGP_LPJ_T0088480.1 MGP_LPJ_G0033479.1 mouse_genomes_project 8 44117125 44135857 + MGP_LPJ_P0088480 Mtnr1a protein_coding protein_coding MGP_LPJ_T0088073.1 MGP_LPJ_G0033330.1 mouse_genomes_project 8 16730946 16733431 + MGP_LPJ_P0088073 Defb4 protein_coding protein_coding MGP_LPJ_T0009135.1 MGP_LPJ_G0007348.1 mouse_genomes_project 8 82530638 82531835 - 4930579O11Rik lincRNA lincRNA MGP_LPJ_T0009136.1 MGP_LPJ_G0007348.1 mouse_genomes_project 8 82530666 82531881 - 4930579O11Rik lincRNA lincRNA MGP_LPJ_T0015903.1 MGP_LPJ_G0013994.1 mouse_genomes_project 8 12521826 12522854 - processed_pseudogene processed_pseudogene MGP_LPJ_T0088638.1 MGP_LPJ_G0033525.1 mouse_genomes_project 8 55648665 55754722 + Glra3 protein_coding processed_transcript MGP_LPJ_T0088639.1 MGP_LPJ_G0033525.1 mouse_genomes_project 8 55648714 55839015 + MGP_LPJ_P0088639 Glra3 protein_coding protein_coding MGP_LPJ_T0101045.1 MGP_LPJ_G0039308.1 mouse_genomes_project 8 83309742 83309878 + Gm25138 snoRNA snoRNA MGP_LPJ_T0090627.1 MGP_LPJ_G0034151.1 mouse_genomes_project 8 126966521 126970473 - MGP_LPJ_P0090627 Spata2l protein_coding protein_coding MGP_LPJ_T0090628.1 MGP_LPJ_G0034151.1 mouse_genomes_project 8 126966524 126970476 - MGP_LPJ_P0090628 Spata2l protein_coding protein_coding MGP_LPJ_T0088377.1 MGP_LPJ_G0033447.1 mouse_genomes_project 8 34033961 34058086 - MGP_LPJ_P0088377 Eri1 protein_coding protein_coding MGP_LPJ_T0090250.1 MGP_LPJ_G0034039.1 mouse_genomes_project 8 114002213 114022669 + MGP_LPJ_P0090250 Pdpr protein_coding protein_coding MGP_LPJ_T0090251.1 MGP_LPJ_G0034039.1 mouse_genomes_project 8 114002224 114047163 + MGP_LPJ_P0090251 Pdpr protein_coding protein_coding MGP_LPJ_T0090252.1 MGP_LPJ_G0034039.1 mouse_genomes_project 8 114002238 114045236 + MGP_LPJ_P0090252 Pdpr protein_coding nonsense_mediated_decay MGP_LPJ_T0090318.1 MGP_LPJ_G0034062.1 mouse_genomes_project 8 117316798 117342881 + Vat1l protein_coding processed_transcript MGP_LPJ_T0090319.1 MGP_LPJ_G0034062.1 mouse_genomes_project 8 117316816 117490683 + MGP_LPJ_P0090319 Vat1l protein_coding protein_coding MGP_LPJ_T0090320.1 MGP_LPJ_G0034062.1 mouse_genomes_project 8 117316820 117342875 + MGP_LPJ_P0090320 Vat1l protein_coding protein_coding MGP_LPJ_T0090321.1 MGP_LPJ_G0034062.1 mouse_genomes_project 8 117484701 117490682 + Vat1l protein_coding retained_intron MGP_LPJ_T0088815.1 MGP_LPJ_G0033575.1 mouse_genomes_project 8 69502611 69524211 + MGP_LPJ_P0088815 Zfp930 protein_coding unknown_likely_coding MGP_LPJ_T0088816.1 MGP_LPJ_G0033575.1 mouse_genomes_project 8 69521573 69524211 + MGP_LPJ_P0088816 Zfp930 protein_coding protein_coding MGP_LPJ_T0015964.1 MGP_LPJ_G0014055.1 mouse_genomes_project 8 114243292 114243499 - processed_pseudogene processed_pseudogene MGP_LPJ_T0090057.1 MGP_LPJ_G0033975.1 mouse_genomes_project 8 108483419 108507345 - MGP_LPJ_P0090057 Slc12a4 protein_coding protein_coding MGP_LPJ_T0090058.1 MGP_LPJ_G0033975.1 mouse_genomes_project 8 108483419 108507416 - MGP_LPJ_P0090058 Slc12a4 protein_coding protein_coding MGP_LPJ_T0090059.1 MGP_LPJ_G0033975.1 mouse_genomes_project 8 108486536 108488019 - Slc12a4 protein_coding retained_intron MGP_LPJ_T0090060.1 MGP_LPJ_G0033975.1 mouse_genomes_project 8 108495169 108505721 - MGP_LPJ_P0090060 Slc12a4 protein_coding protein_coding MGP_LPJ_T0090061.1 MGP_LPJ_G0033975.1 mouse_genomes_project 8 108501756 108507375 - Slc12a4 protein_coding retained_intron MGP_LPJ_T0098059.1 MGP_LPJ_G0036340.1 mouse_genomes_project 8 23638020 23639013 + pseudogene pseudogene MGP_LPJ_T0089003.1 MGP_LPJ_G0033625.1 mouse_genomes_project 8 70955237 70969819 - MGP_LPJ_P0089003 Pgpep1 protein_coding protein_coding MGP_LPJ_T0089706.1 MGP_LPJ_G0033840.1 mouse_genomes_project 8 93179294 93182678 - MGP_LPJ_P0089706 Irx3 protein_coding protein_coding MGP_LPJ_T0089707.1 MGP_LPJ_G0033840.1 mouse_genomes_project 8 93179294 93182677 - MGP_LPJ_P0089707 Irx3 protein_coding protein_coding MGP_LPJ_T0089019.1 MGP_LPJ_G0033633.1 mouse_genomes_project 8 71084766 71088659 - MGP_LPJ_P0089019 Ifi30 protein_coding protein_coding MGP_LPJ_T0009096.1 MGP_LPJ_G0007315.1 mouse_genomes_project 8 25774618 25796876 + Gm1698 lincRNA lincRNA MGP_LPJ_T0010963.1 MGP_LPJ_G0009081.1 mouse_genomes_project 8 2595331 2595400 + Gm22565 miRNA miRNA MGP_LPJ_T0011727.1 MGP_LPJ_G0009845.1 mouse_genomes_project 8 9552521 9555124 + Gm22207 misc_RNA misc_RNA MGP_LPJ_T0089709.1 MGP_LPJ_G0033842.1 mouse_genomes_project 8 94102636 94109243 + MGP_LPJ_P0089709 Irx6 protein_coding protein_coding MGP_LPJ_T0089710.1 MGP_LPJ_G0033842.1 mouse_genomes_project 8 94103114 94109243 + MGP_LPJ_P0089710 Irx6 protein_coding protein_coding MGP_LPJ_T0002352.1 MGP_LPJ_G0002260.1 mouse_genomes_project 8 10531451 10533572 - TEC TEC MGP_LPJ_T0015943.1 MGP_LPJ_G0014034.1 mouse_genomes_project 8 79200948 79202087 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099787.1 MGP_LPJ_G0038050.1 mouse_genomes_project 8 109598746 109598856 - Gm22085 snRNA snRNA MGP_LPJ_T0089859.1 MGP_LPJ_G0033893.1 mouse_genomes_project 8 97030313 97048576 - MGP_LPJ_P0089859 Cfap20 protein_coding protein_coding MGP_LPJ_T0101026.1 MGP_LPJ_G0039289.1 mouse_genomes_project 8 44646660 44646792 - Gm23604 snoRNA snoRNA MGP_LPJ_T0090200.1 MGP_LPJ_G0034028.1 mouse_genomes_project 8 113487306 113591352 + MGP_LPJ_P0090200 Vac14 protein_coding protein_coding MGP_LPJ_T0088265.1 MGP_LPJ_G0033401.1 mouse_genomes_project 8 23995233 24028864 - MGP_LPJ_P0088265 Hgsnat protein_coding protein_coding MGP_LPJ_T0090347.1 MGP_LPJ_G0034073.1 mouse_genomes_project 8 120252063 120345141 - MGP_LPJ_P0090347 Pkd1l2 protein_coding protein_coding MGP_LPJ_T0090348.1 MGP_LPJ_G0034073.1 mouse_genomes_project 8 120260900 120276703 - Pkd1l2 protein_coding retained_intron MGP_LPJ_T0090349.1 MGP_LPJ_G0034073.1 mouse_genomes_project 8 120276157 120281268 - Pkd1l2 protein_coding retained_intron MGP_LPJ_T0089252.1 MGP_LPJ_G0033709.1 mouse_genomes_project 8 78243970 78259301 - MGP_LPJ_P0089252 Tmem184c protein_coding protein_coding MGP_LPJ_T0089253.1 MGP_LPJ_G0033709.1 mouse_genomes_project 8 78244635 78258873 - MGP_LPJ_P0089253 Tmem184c protein_coding unknown_likely_coding MGP_LPJ_T0089254.1 MGP_LPJ_G0033709.1 mouse_genomes_project 8 78244635 78259347 - MGP_LPJ_P0089254 Tmem184c protein_coding unknown_likely_coding MGP_LPJ_T0089255.1 MGP_LPJ_G0033709.1 mouse_genomes_project 8 78252337 78259346 - MGP_LPJ_P0089255 Tmem184c protein_coding protein_coding MGP_LPJ_T0089256.1 MGP_LPJ_G0033709.1 mouse_genomes_project 8 78255832 78259316 - MGP_LPJ_P0089256 Tmem184c protein_coding protein_coding MGP_LPJ_T0011050.1 MGP_LPJ_G0009168.1 mouse_genomes_project 8 128952598 128952656 + Gm22197 miRNA miRNA MGP_LPJ_T0090663.1 MGP_LPJ_G0034158.1 mouse_genomes_project 8 127169660 127181773 + MGP_LPJ_P0090663 Tubb3 protein_coding protein_coding MGP_LPJ_T0099795.1 MGP_LPJ_G0038058.1 mouse_genomes_project 8 125483967 125484074 + Gm24283 snRNA snRNA MGP_LPJ_T0088254.1 MGP_LPJ_G0033398.1 mouse_genomes_project 8 23858154 23864326 + MGP_LPJ_P0088254 Star protein_coding protein_coding MGP_LPJ_T0099771.1 MGP_LPJ_G0038034.1 mouse_genomes_project 8 67365929 67366053 - Gm24274 snRNA snRNA MGP_LPJ_T0087975.1 MGP_LPJ_G0033296.1 mouse_genomes_project 8 10734859 10764535 - MGP_LPJ_P0087975 Gas6 protein_coding protein_coding MGP_LPJ_T0089720.1 MGP_LPJ_G0033849.1 mouse_genomes_project 8 94551887 94575525 - MGP_LPJ_P0089720 Ces1c protein_coding protein_coding MGP_LPJ_T0089721.1 MGP_LPJ_G0033849.1 mouse_genomes_project 8 94558756 94575537 - Ces1c protein_coding retained_intron MGP_LPJ_T0089722.1 MGP_LPJ_G0033849.1 mouse_genomes_project 8 94561851 94568928 - MGP_LPJ_P0089722 Ces1c protein_coding protein_coding MGP_LPJ_T0090301.1 MGP_LPJ_G0034056.1 mouse_genomes_project 8 115004151 115014648 + MGP_LPJ_P0090301 Terf2ip protein_coding protein_coding MGP_LPJ_T0005352.1 MGP_LPJ_G0004540.1 mouse_genomes_project 8 10056720 10062243 - Gm15350 antisense antisense MGP_LPJ_T0005353.1 MGP_LPJ_G0004540.1 mouse_genomes_project 8 10056720 10060304 - Gm15350 antisense antisense MGP_LPJ_T0089861.1 MGP_LPJ_G0033895.1 mouse_genomes_project 8 97152909 97179741 + MGP_LPJ_P0089861 Ccdc113 protein_coding protein_coding MGP_LPJ_T0087765.1 MGP_LPJ_G0033232.1 mouse_genomes_project 8 611625 623846 - MGP_LPJ_P0087765 Fcer2a protein_coding protein_coding MGP_LPJ_T0098314.1 MGP_LPJ_G0036595.1 mouse_genomes_project 8 6608062 6608180 - n-R5s95 rRNA rRNA MGP_LPJ_T0088092.1 MGP_LPJ_G0033348.1 mouse_genomes_project 8 19789820 19791905 + MGP_LPJ_P0088092 Defb13 protein_coding protein_coding MGP_LPJ_T0009094.1 MGP_LPJ_G0007313.1 mouse_genomes_project 8 24941624 24953576 - lincRNA lincRNA MGP_LPJ_T0089854.1 MGP_LPJ_G0033890.1 mouse_genomes_project 8 96939010 96944824 - MGP_LPJ_P0089854 Zfp319 protein_coding protein_coding MGP_LPJ_T0087739.1 MGP_LPJ_G0033227.1 mouse_genomes_project 8 552770 554931 - Pcp2 protein_coding retained_intron MGP_LPJ_T0087740.1 MGP_LPJ_G0033227.1 mouse_genomes_project 8 552770 554931 - MGP_LPJ_P0087740 Pcp2 protein_coding protein_coding MGP_LPJ_T0087741.1 MGP_LPJ_G0033227.1 mouse_genomes_project 8 552776 554931 - Pcp2 protein_coding retained_intron MGP_LPJ_T0087742.1 MGP_LPJ_G0033227.1 mouse_genomes_project 8 552776 554388 - MGP_LPJ_P0087742 Pcp2 protein_coding protein_coding MGP_LPJ_T0087743.1 MGP_LPJ_G0033227.1 mouse_genomes_project 8 552776 554668 - MGP_LPJ_P0087743 Pcp2 protein_coding protein_coding MGP_LPJ_T0087744.1 MGP_LPJ_G0033227.1 mouse_genomes_project 8 552776 554435 - MGP_LPJ_P0087744 Pcp2 protein_coding protein_coding MGP_LPJ_T0087745.1 MGP_LPJ_G0033227.1 mouse_genomes_project 8 552779 554911 - Pcp2 protein_coding processed_transcript MGP_LPJ_T0101041.1 MGP_LPJ_G0039304.1 mouse_genomes_project 8 71226789 71226920 - Snora68 snoRNA snoRNA MGP_LPJ_T0015939.1 MGP_LPJ_G0014030.1 mouse_genomes_project 8 74304806 74305289 - processed_pseudogene processed_pseudogene MGP_LPJ_T0090288.1 MGP_LPJ_G0034048.1 mouse_genomes_project 8 114671197 114693880 - MGP_LPJ_P0090288 Bcar1 protein_coding unknown_likely_coding MGP_LPJ_T0090289.1 MGP_LPJ_G0034048.1 mouse_genomes_project 8 114671214 114705678 - MGP_LPJ_P0090289 Bcar1 protein_coding protein_coding MGP_LPJ_T0088087.1 MGP_LPJ_G0033343.1 mouse_genomes_project 8 19673206 19676317 + MGP_LPJ_P0088087 Defb10 protein_coding protein_coding MGP_LPJ_T0009084.1 MGP_LPJ_G0007306.1 mouse_genomes_project 8 8882205 8891328 + 1700128E19Rik lincRNA lincRNA MGP_LPJ_T0090402.1 MGP_LPJ_G0034097.1 mouse_genomes_project 8 123361851 123377830 + MGP_LPJ_P0090402 Klhl36 protein_coding protein_coding MGP_LPJ_T0089152.1 MGP_LPJ_G0033672.1 mouse_genomes_project 8 72299410 72333345 + MGP_LPJ_P0089152 protein_coding protein_coding MGP_LPJ_T0089153.1 MGP_LPJ_G0033672.1 mouse_genomes_project 8 72299758 72300125 + protein_coding processed_transcript MGP_LPJ_T0087841.1 MGP_LPJ_G0033252.1 mouse_genomes_project 8 1508632 1526061 + MGP_LPJ_P0087841 Zfp958 protein_coding protein_coding MGP_LPJ_T0087842.1 MGP_LPJ_G0033252.1 mouse_genomes_project 8 1522351 1525892 + MGP_LPJ_P0087842 Zfp958 protein_coding protein_coding MGP_LPJ_T0011011.1 MGP_LPJ_G0009129.1 mouse_genomes_project 8 85963031 85963140 - Gm24197 miRNA miRNA MGP_LPJ_T0090115.1 MGP_LPJ_G0033997.1 mouse_genomes_project 8 109639246 109641732 - MGP_LPJ_P0090115 Pdf protein_coding nonsense_mediated_decay MGP_LPJ_T0090118.1 MGP_LPJ_G0033997.1 mouse_genomes_project 8 109641065 109644076 - MGP_LPJ_P0090118 Pdf protein_coding protein_coding MGP_LPJ_T0089881.1 MGP_LPJ_G0033901.1 mouse_genomes_project 8 97481704 97499127 - MGP_LPJ_P0089881 Slc38a7 protein_coding unknown_likely_coding MGP_LPJ_T0089882.1 MGP_LPJ_G0033901.1 mouse_genomes_project 8 97485205 97486984 - Slc38a7 protein_coding retained_intron MGP_LPJ_T0089883.1 MGP_LPJ_G0033901.1 mouse_genomes_project 8 97487182 97489158 - Slc38a7 protein_coding retained_intron MGP_LPJ_T0099798.1 MGP_LPJ_G0038061.1 mouse_genomes_project 8 128189168 128189254 + Gm24459 snRNA snRNA MGP_LPJ_T0011027.1 MGP_LPJ_G0009145.1 mouse_genomes_project 8 108121237 108121345 + Mir1966 miRNA miRNA MGP_LPJ_T0088056.1 MGP_LPJ_G0033319.1 mouse_genomes_project 8 16348893 16395132 + MGP_LPJ_P0088056 Agpat5 protein_coding protein_coding MGP_LPJ_T0088057.1 MGP_LPJ_G0033319.1 mouse_genomes_project 8 16349256 16385748 + MGP_LPJ_P0088057 Agpat5 protein_coding protein_coding MGP_LPJ_T0009197.1 MGP_LPJ_G0007389.1 mouse_genomes_project 8 123732332 123757939 - A330074K22Rik lincRNA lincRNA MGP_LPJ_T0090360.1 MGP_LPJ_G0034079.1 mouse_genomes_project 8 121044442 121110022 + MGP_LPJ_P0090360 Hsd17b2 protein_coding protein_coding MGP_LPJ_T0089077.1 MGP_LPJ_G0033652.1 mouse_genomes_project 8 71775144 71779015 + MGP_LPJ_P0089077 Ankle1 protein_coding protein_coding MGP_LPJ_T0089078.1 MGP_LPJ_G0033652.1 mouse_genomes_project 8 71775150 71778979 + Ankle1 protein_coding retained_intron MGP_LPJ_T0089079.1 MGP_LPJ_G0033652.1 mouse_genomes_project 8 71775156 71778613 + Ankle1 protein_coding retained_intron MGP_LPJ_T0089080.1 MGP_LPJ_G0033652.1 mouse_genomes_project 8 71775158 71778620 + MGP_LPJ_P0089080 Ankle1 protein_coding protein_coding MGP_LPJ_T0089081.1 MGP_LPJ_G0033652.1 mouse_genomes_project 8 71776825 71778292 + Ankle1 protein_coding retained_intron MGP_LPJ_T0088252.1 MGP_LPJ_G0033396.1 mouse_genomes_project 8 23814224 23834896 - MGP_LPJ_P0088252 Bag4 protein_coding protein_coding MGP_LPJ_T0099764.1 MGP_LPJ_G0038027.1 mouse_genomes_project 8 51532194 51532333 + Gm24929 snRNA snRNA MGP_LPJ_T0010979.1 MGP_LPJ_G0009097.1 mouse_genomes_project 8 24296839 24296915 + Gm44299 miRNA miRNA MGP_LPJ_T0011048.1 MGP_LPJ_G0009166.1 mouse_genomes_project 8 126860062 126860129 + Mir7080 miRNA miRNA MGP_LPJ_T0089358.1 MGP_LPJ_G0033746.1 mouse_genomes_project 8 84661638 84669772 + MGP_LPJ_P0089358 Ddx39 protein_coding protein_coding MGP_LPJ_T0089359.1 MGP_LPJ_G0033746.1 mouse_genomes_project 8 84661729 84669698 + Ddx39 protein_coding retained_intron MGP_LPJ_T0089360.1 MGP_LPJ_G0033746.1 mouse_genomes_project 8 84661729 84669699 + MGP_LPJ_P0089360 Ddx39 protein_coding nonsense_mediated_decay MGP_LPJ_T0089361.1 MGP_LPJ_G0033746.1 mouse_genomes_project 8 84661733 84673338 + MGP_LPJ_P0089361 Ddx39 protein_coding protein_coding MGP_LPJ_T0089362.1 MGP_LPJ_G0033746.1 mouse_genomes_project 8 84662009 84669772 + MGP_LPJ_P0089362 Ddx39 protein_coding protein_coding MGP_LPJ_T0089363.1 MGP_LPJ_G0033746.1 mouse_genomes_project 8 84666040 84667718 + Ddx39 protein_coding retained_intron MGP_LPJ_T0089195.1 MGP_LPJ_G0033689.1 mouse_genomes_project 8 73022600 73041329 + MGP_LPJ_P0089195 1700030K09Rik protein_coding protein_coding MGP_LPJ_T0089196.1 MGP_LPJ_G0033689.1 mouse_genomes_project 8 73022652 73040969 + MGP_LPJ_P0089196 1700030K09Rik protein_coding protein_coding MGP_LPJ_T0089197.1 MGP_LPJ_G0033689.1 mouse_genomes_project 8 73036972 73037952 + 1700030K09Rik protein_coding retained_intron MGP_LPJ_T0015933.1 MGP_LPJ_G0014024.1 mouse_genomes_project 8 63788328 63789330 + processed_pseudogene processed_pseudogene MGP_LPJ_T0089968.1 MGP_LPJ_G0033936.1 mouse_genomes_project 8 107734402 107741051 - MGP_LPJ_P0089968 Tradd protein_coding protein_coding MGP_LPJ_T0089969.1 MGP_LPJ_G0033936.1 mouse_genomes_project 8 107735306 107736237 - Tradd protein_coding retained_intron MGP_LPJ_T0089970.1 MGP_LPJ_G0033936.1 mouse_genomes_project 8 107735399 107741023 - MGP_LPJ_P0089970 Tradd protein_coding nonsense_mediated_decay MGP_LPJ_T0089971.1 MGP_LPJ_G0033936.1 mouse_genomes_project 8 107735873 107741045 - MGP_LPJ_P0089971 Tradd protein_coding nonsense_mediated_decay MGP_LPJ_T0089007.1 MGP_LPJ_G0033627.1 mouse_genomes_project 8 71009052 71011925 + MGP_LPJ_P0089007 Jund protein_coding protein_coding MGP_LPJ_T0102470.1 MGP_LPJ_G0040506.1 mouse_genomes_project 8 18675481 18676480 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0090087.1 MGP_LPJ_G0033983.1 mouse_genomes_project 8 108726005 108756837 + MGP_LPJ_P0090087 Slc7a6 protein_coding protein_coding MGP_LPJ_T0009188.1 MGP_LPJ_G0007382.1 mouse_genomes_project 8 108798494 108989996 - Gm26786 lincRNA lincRNA MGP_LPJ_T0011035.1 MGP_LPJ_G0009153.1 mouse_genomes_project 8 113947228 113947305 - Gm24103 miRNA miRNA MGP_LPJ_T0099758.1 MGP_LPJ_G0038021.1 mouse_genomes_project 8 35023273 35023424 - Gm26150 snRNA snRNA MGP_LPJ_T0098716.1 MGP_LPJ_G0036980.1 mouse_genomes_project 8 9588099 9645990 + Gm5607 sense_overlapping sense_overlapping MGP_LPJ_T0098717.1 MGP_LPJ_G0036980.1 mouse_genomes_project 8 9588099 9646011 + Gm5607 sense_overlapping sense_overlapping MGP_LPJ_T0101010.1 MGP_LPJ_G0039273.1 mouse_genomes_project 8 14271338 14271458 + Gm25278 snoRNA snoRNA MGP_LPJ_T0090695.1 MGP_LPJ_G0034171.1 mouse_genomes_project 8 128061353 128177723 + MGP_LPJ_P0090695 Galnt2 protein_coding protein_coding MGP_LPJ_T0090696.1 MGP_LPJ_G0034171.1 mouse_genomes_project 8 128061477 128164826 + Galnt2 protein_coding processed_transcript MGP_LPJ_T0090697.1 MGP_LPJ_G0034171.1 mouse_genomes_project 8 128125016 128153635 + Galnt2 protein_coding processed_transcript MGP_LPJ_T0090698.1 MGP_LPJ_G0034171.1 mouse_genomes_project 8 128125279 128177725 + Galnt2 protein_coding processed_transcript MGP_LPJ_T0087887.1 MGP_LPJ_G0033274.1 mouse_genomes_project 8 9016117 9030992 + MGP_LPJ_P0087887 Tex29 protein_coding protein_coding MGP_LPJ_T0087888.1 MGP_LPJ_G0033274.1 mouse_genomes_project 8 9016254 9019798 + Tex29 protein_coding processed_transcript MGP_LPJ_T0087889.1 MGP_LPJ_G0033274.1 mouse_genomes_project 8 9016558 9030936 + MGP_LPJ_P0087889 Tex29 protein_coding protein_coding MGP_LPJ_T0087890.1 MGP_LPJ_G0033274.1 mouse_genomes_project 8 9017697 9030988 + Tex29 protein_coding processed_transcript MGP_LPJ_T0002356.1 MGP_LPJ_G0002264.1 mouse_genomes_project 8 76175211 76175616 - TEC TEC MGP_LPJ_T0018403.1 MGP_LPJ_G0015628.1 mouse_genomes_project 8 39891760 39898469 + B430010I23Rik processed_transcript processed_transcript MGP_LPJ_T0018404.1 MGP_LPJ_G0015628.1 mouse_genomes_project 8 39892030 39894828 + B430010I23Rik processed_transcript processed_transcript MGP_LPJ_T0015907.1 MGP_LPJ_G0013998.1 mouse_genomes_project 8 17096285 17189992 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011721.1 MGP_LPJ_G0009839.1 mouse_genomes_project 8 658461 658774 - Gm23886 misc_RNA misc_RNA MGP_LPJ_T0090768.1 MGP_LPJ_G0034195.1 mouse_genomes_project 8 130397206 130400139 + MGP_LPJ_P0090768 Coa6 protein_coding protein_coding MGP_LPJ_T0089905.1 MGP_LPJ_G0033911.1 mouse_genomes_project 8 106637118 106637339 + MGP_LPJ_P0089905 Gm11020 protein_coding protein_coding MGP_LPJ_T0009120.1 MGP_LPJ_G0007335.1 mouse_genomes_project 8 61155833 61168648 - lincRNA lincRNA MGP_LPJ_T0005378.1 MGP_LPJ_G0004558.1 mouse_genomes_project 8 44799189 44901869 - Sorbs2os antisense antisense MGP_LPJ_T0009196.1 MGP_LPJ_G0007388.1 mouse_genomes_project 8 123617874 123620197 + A130014A01Rik lincRNA lincRNA MGP_LPJ_T0088326.1 MGP_LPJ_G0033430.1 mouse_genomes_project 8 31796696 31827878 + MGP_LPJ_P0088326 Purg protein_coding protein_coding MGP_LPJ_T0088327.1 MGP_LPJ_G0033430.1 mouse_genomes_project 8 31796696 31797903 + MGP_LPJ_P0088327 Purg protein_coding protein_coding MGP_LPJ_T0087894.1 MGP_LPJ_G0033278.1 mouse_genomes_project 8 9790211 9819026 + MGP_LPJ_P0087894 Spaca7 protein_coding protein_coding MGP_LPJ_T0009131.1 MGP_LPJ_G0007344.1 mouse_genomes_project 8 78274818 78283951 + lincRNA lincRNA MGP_LPJ_T0090399.1 MGP_LPJ_G0034095.1 mouse_genomes_project 8 123249451 123267305 - MGP_LPJ_P0090399 Tldc1 protein_coding protein_coding MGP_LPJ_T0088522.1 MGP_LPJ_G0033489.1 mouse_genomes_project 8 45062471 45089841 + MGP_LPJ_P0088522 Ufsp2 protein_coding protein_coding MGP_LPJ_T0088523.1 MGP_LPJ_G0033489.1 mouse_genomes_project 8 45062477 45089740 + Ufsp2 protein_coding retained_intron MGP_LPJ_T0088524.1 MGP_LPJ_G0033489.1 mouse_genomes_project 8 45062487 45067839 + Ufsp2 protein_coding retained_intron MGP_LPJ_T0088525.1 MGP_LPJ_G0033489.1 mouse_genomes_project 8 45062493 45072345 + Ufsp2 protein_coding processed_transcript MGP_LPJ_T0088526.1 MGP_LPJ_G0033489.1 mouse_genomes_project 8 45062521 45067356 + Ufsp2 protein_coding processed_transcript MGP_LPJ_T0088527.1 MGP_LPJ_G0033489.1 mouse_genomes_project 8 45088010 45089743 + Ufsp2 protein_coding retained_intron MGP_LPJ_T0101019.1 MGP_LPJ_G0039282.1 mouse_genomes_project 8 29482313 29482417 - Snord13 snoRNA snoRNA MGP_LPJ_T0018434.1 MGP_LPJ_G0015639.1 mouse_genomes_project 8 88521395 88527266 - Gm27208 processed_transcript lincRNA MGP_LPJ_T0018435.1 MGP_LPJ_G0015639.1 mouse_genomes_project 8 88526783 88527888 - Gm27208 processed_transcript TEC MGP_LPJ_T0101048.1 MGP_LPJ_G0039311.1 mouse_genomes_project 8 88083948 88084065 - Gm24781 snoRNA snoRNA MGP_LPJ_T0015946.1 MGP_LPJ_G0014037.1 mouse_genomes_project 8 80473754 80474697 + processed_pseudogene processed_pseudogene MGP_LPJ_T0088719.1 MGP_LPJ_G0033546.1 mouse_genomes_project 8 61989439 62057310 - MGP_LPJ_P0088719 Anxa10 protein_coding protein_coding MGP_LPJ_T0088720.1 MGP_LPJ_G0033546.1 mouse_genomes_project 8 61989918 62057316 - MGP_LPJ_P0088720 Anxa10 protein_coding protein_coding MGP_LPJ_T0088827.1 MGP_LPJ_G0033581.1 mouse_genomes_project 8 70020877 70029159 - MGP_LPJ_P0088827 Zfp963 protein_coding protein_coding MGP_LPJ_T0088829.1 MGP_LPJ_G0033581.1 mouse_genomes_project 8 70022172 70029167 - MGP_LPJ_P0088829 Zfp963 protein_coding protein_coding MGP_LPJ_T0088001.1 MGP_LPJ_G0033306.1 mouse_genomes_project 8 11294822 11326029 - MGP_LPJ_P0088001 Tdrp protein_coding protein_coding MGP_LPJ_T0088002.1 MGP_LPJ_G0033306.1 mouse_genomes_project 8 11294943 11296201 - Tdrp protein_coding processed_transcript MGP_LPJ_T0088003.1 MGP_LPJ_G0033306.1 mouse_genomes_project 8 11296569 11306029 - Tdrp protein_coding processed_transcript MGP_LPJ_T0088004.1 MGP_LPJ_G0033306.1 mouse_genomes_project 8 11296926 11326284 - MGP_LPJ_P0088004 Tdrp protein_coding protein_coding MGP_LPJ_T0088005.1 MGP_LPJ_G0033306.1 mouse_genomes_project 8 11317965 11325995 - Tdrp protein_coding retained_intron MGP_LPJ_T0005374.1 MGP_LPJ_G0004554.1 mouse_genomes_project 8 32249408 32271152 + Gm26632 antisense antisense MGP_LPJ_T0098682.1 MGP_LPJ_G0036951.1 mouse_genomes_project 8 126757736 126759875 + 2810013P06Rik sense_intronic sense_intronic MGP_LPJ_T0090699.1 MGP_LPJ_G0034172.1 mouse_genomes_project 8 128200753 128281916 - MGP_LPJ_P0090699 Pgbd5 protein_coding protein_coding MGP_LPJ_T0090700.1 MGP_LPJ_G0034172.1 mouse_genomes_project 8 128200753 128276177 - MGP_LPJ_P0090700 Pgbd5 protein_coding protein_coding MGP_LPJ_T0090701.1 MGP_LPJ_G0034172.1 mouse_genomes_project 8 128200757 128276579 - MGP_LPJ_P0090701 Pgbd5 protein_coding protein_coding MGP_LPJ_T0090702.1 MGP_LPJ_G0034172.1 mouse_genomes_project 8 128201732 128231630 - MGP_LPJ_P0090702 Pgbd5 protein_coding protein_coding MGP_LPJ_T0090703.1 MGP_LPJ_G0034172.1 mouse_genomes_project 8 128203578 128208625 - Pgbd5 protein_coding processed_transcript MGP_LPJ_T0090704.1 MGP_LPJ_G0034172.1 mouse_genomes_project 8 128203594 128208176 - Pgbd5 protein_coding retained_intron MGP_LPJ_T0090456.1 MGP_LPJ_G0034108.1 mouse_genomes_project 8 124227161 124228716 + Cox4i1 protein_coding retained_intron MGP_LPJ_T0090457.1 MGP_LPJ_G0034108.1 mouse_genomes_project 8 124227184 124233094 + MGP_LPJ_P0090457 Cox4i1 protein_coding protein_coding MGP_LPJ_T0090458.1 MGP_LPJ_G0034108.1 mouse_genomes_project 8 124227236 124232926 + MGP_LPJ_P0090458 Cox4i1 protein_coding nonsense_mediated_decay MGP_LPJ_T0090459.1 MGP_LPJ_G0034108.1 mouse_genomes_project 8 124231470 124232994 + Cox4i1 protein_coding retained_intron MGP_LPJ_T0090460.1 MGP_LPJ_G0034108.1 mouse_genomes_project 8 124232032 124233088 + Cox4i1 protein_coding retained_intron MGP_LPJ_T0010982.1 MGP_LPJ_G0009100.1 mouse_genomes_project 8 34346838 34346965 - Gm44474 miRNA miRNA MGP_LPJ_T0088770.1 MGP_LPJ_G0033567.1 mouse_genomes_project 8 67890383 68180843 - MGP_LPJ_P0088770 Psd3 protein_coding protein_coding MGP_LPJ_T0088771.1 MGP_LPJ_G0033567.1 mouse_genomes_project 8 67890383 68180843 - MGP_LPJ_P0088771 Psd3 protein_coding protein_coding MGP_LPJ_T0088772.1 MGP_LPJ_G0033567.1 mouse_genomes_project 8 67890390 68018564 - MGP_LPJ_P0088772 Psd3 protein_coding protein_coding MGP_LPJ_T0088773.1 MGP_LPJ_G0033567.1 mouse_genomes_project 8 67897346 68180843 - MGP_LPJ_P0088773 Psd3 protein_coding protein_coding MGP_LPJ_T0088774.1 MGP_LPJ_G0033567.1 mouse_genomes_project 8 67898180 68116896 - MGP_LPJ_P0088774 Psd3 protein_coding protein_coding MGP_LPJ_T0088775.1 MGP_LPJ_G0033567.1 mouse_genomes_project 8 67912825 68018502 - MGP_LPJ_P0088775 Psd3 protein_coding protein_coding MGP_LPJ_T0088776.1 MGP_LPJ_G0033567.1 mouse_genomes_project 8 67993364 68268280 - Psd3 protein_coding retained_intron MGP_LPJ_T0088777.1 MGP_LPJ_G0033567.1 mouse_genomes_project 8 68080650 68108778 - Psd3 protein_coding processed_transcript MGP_LPJ_T0088778.1 MGP_LPJ_G0033567.1 mouse_genomes_project 8 68108305 68158161 - Psd3 protein_coding retained_intron MGP_LPJ_T0002358.1 MGP_LPJ_G0002266.1 mouse_genomes_project 8 86481123 86481761 + TEC TEC MGP_LPJ_T0002359.1 MGP_LPJ_G0002266.1 mouse_genomes_project 8 86481123 86481753 + TEC TEC MGP_LPJ_T0090111.1 MGP_LPJ_G0033995.1 mouse_genomes_project 8 109519867 109603436 + MGP_LPJ_P0090111 Sntb2 protein_coding protein_coding MGP_LPJ_T0098317.1 MGP_LPJ_G0036598.1 mouse_genomes_project 8 43638376 43638483 + Gm26089 rRNA rRNA MGP_LPJ_T0002368.1 MGP_LPJ_G0002275.1 mouse_genomes_project 8 124744330 124745008 + TEC TEC MGP_LPJ_T0009124.1 MGP_LPJ_G0007338.1 mouse_genomes_project 8 68429404 68434796 - lincRNA lincRNA MGP_LPJ_T0098315.1 MGP_LPJ_G0036596.1 mouse_genomes_project 8 12862987 12863080 + Gm24222 rRNA rRNA MGP_LPJ_T0098070.1 MGP_LPJ_G0036351.1 mouse_genomes_project 8 127658167 127659170 + pseudogene pseudogene MGP_LPJ_T0011004.1 MGP_LPJ_G0009122.1 mouse_genomes_project 8 85163789 85163861 - Mir181d miRNA miRNA MGP_LPJ_T0005392.1 MGP_LPJ_G0004570.1 mouse_genomes_project 8 68696981 68698513 + Gm15656 antisense antisense MGP_LPJ_T0011044.1 MGP_LPJ_G0009162.1 mouse_genomes_project 8 124687994 124688092 - Gm27530 miRNA miRNA MGP_LPJ_T0011744.1 MGP_LPJ_G0009862.1 mouse_genomes_project 8 124286210 124286465 - Gm24239 misc_RNA misc_RNA MGP_LPJ_T0087981.1 MGP_LPJ_G0033298.1 mouse_genomes_project 8 10850824 10868037 - Rasa3 protein_coding retained_intron MGP_LPJ_T0087982.1 MGP_LPJ_G0033298.1 mouse_genomes_project 8 10850824 10974413 - MGP_LPJ_P0087982 Rasa3 protein_coding protein_coding MGP_LPJ_T0087983.1 MGP_LPJ_G0033298.1 mouse_genomes_project 8 10861449 10862012 - Rasa3 protein_coding retained_intron MGP_LPJ_T0087984.1 MGP_LPJ_G0033298.1 mouse_genomes_project 8 10882497 10892712 - Rasa3 protein_coding retained_intron MGP_LPJ_T0087985.1 MGP_LPJ_G0033298.1 mouse_genomes_project 8 10882498 10974261 - MGP_LPJ_P0087985 Rasa3 protein_coding nonsense_mediated_decay MGP_LPJ_T0087986.1 MGP_LPJ_G0033298.1 mouse_genomes_project 8 10884782 10974293 - Rasa3 protein_coding retained_intron MGP_LPJ_T0089028.1 MGP_LPJ_G0033637.1 mouse_genomes_project 8 71158403 71163076 - MGP_LPJ_P0089028 Arrdc2 protein_coding protein_coding MGP_LPJ_T0005400.1 MGP_LPJ_G0004577.1 mouse_genomes_project 8 92994166 93002432 - Gm3235 antisense antisense MGP_LPJ_T0088944.1 MGP_LPJ_G0033609.1 mouse_genomes_project 8 70604794 70622180 + MGP_LPJ_P0088944 protein_coding protein_coding MGP_LPJ_T0088945.1 MGP_LPJ_G0033609.1 mouse_genomes_project 8 70604794 70622185 + MGP_LPJ_P0088945 protein_coding protein_coding MGP_LPJ_T0088946.1 MGP_LPJ_G0033609.1 mouse_genomes_project 8 70607370 70611712 + protein_coding retained_intron MGP_LPJ_T0005380.1 MGP_LPJ_G0004560.1 mouse_genomes_project 8 46184019 46195386 - 4930579M01Rik antisense antisense MGP_LPJ_T0002362.1 MGP_LPJ_G0002269.1 mouse_genomes_project 8 109721492 109722275 + TEC TEC MGP_LPJ_T0088641.1 MGP_LPJ_G0033527.1 mouse_genomes_project 8 56249222 56270224 - MGP_LPJ_P0088641 Cep44 protein_coding protein_coding MGP_LPJ_T0088642.1 MGP_LPJ_G0033527.1 mouse_genomes_project 8 56249222 56264849 - MGP_LPJ_P0088642 Cep44 protein_coding protein_coding MGP_LPJ_T0088643.1 MGP_LPJ_G0033527.1 mouse_genomes_project 8 56262290 56270210 - MGP_LPJ_P0088643 Cep44 protein_coding protein_coding MGP_LPJ_T0088644.1 MGP_LPJ_G0033527.1 mouse_genomes_project 8 56263577 56270166 - MGP_LPJ_P0088644 Cep44 protein_coding protein_coding MGP_LPJ_T0088645.1 MGP_LPJ_G0033527.1 mouse_genomes_project 8 56263644 56270239 - MGP_LPJ_P0088645 Cep44 protein_coding protein_coding MGP_LPJ_T0088646.1 MGP_LPJ_G0033527.1 mouse_genomes_project 8 56264835 56270414 - MGP_LPJ_P0088646 Cep44 protein_coding protein_coding MGP_LPJ_T0088647.1 MGP_LPJ_G0033527.1 mouse_genomes_project 8 56268351 56269628 - Cep44 protein_coding processed_transcript MGP_LPJ_T0088648.1 MGP_LPJ_G0033527.1 mouse_genomes_project 8 56268699 56270170 - Cep44 protein_coding processed_transcript MGP_LPJ_T0011745.1 MGP_LPJ_G0009863.1 mouse_genomes_project 8 127274275 127274556 + Gm22314 misc_RNA misc_RNA MGP_LPJ_T0090225.1 MGP_LPJ_G0034033.1 mouse_genomes_project 8 113765762 113786800 - MGP_LPJ_P0090225 Fuk protein_coding protein_coding MGP_LPJ_T0087746.1 MGP_LPJ_G0033228.1 mouse_genomes_project 8 560340 573592 + MGP_LPJ_P0087746 Stxbp2 protein_coding protein_coding MGP_LPJ_T0087747.1 MGP_LPJ_G0033228.1 mouse_genomes_project 8 560537 565484 + Stxbp2 protein_coding processed_transcript MGP_LPJ_T0087748.1 MGP_LPJ_G0033228.1 mouse_genomes_project 8 560538 563310 + Stxbp2 protein_coding processed_transcript MGP_LPJ_T0087749.1 MGP_LPJ_G0033228.1 mouse_genomes_project 8 560538 565629 + Stxbp2 protein_coding processed_transcript MGP_LPJ_T0087750.1 MGP_LPJ_G0033228.1 mouse_genomes_project 8 560542 564121 + Stxbp2 protein_coding retained_intron MGP_LPJ_T0087751.1 MGP_LPJ_G0033228.1 mouse_genomes_project 8 560550 565732 + Stxbp2 protein_coding retained_intron MGP_LPJ_T0087752.1 MGP_LPJ_G0033228.1 mouse_genomes_project 8 560555 572743 + MGP_LPJ_P0087752 Stxbp2 protein_coding protein_coding MGP_LPJ_T0087753.1 MGP_LPJ_G0033228.1 mouse_genomes_project 8 562300 563452 + Stxbp2 protein_coding retained_intron MGP_LPJ_T0087754.1 MGP_LPJ_G0033228.1 mouse_genomes_project 8 565405 565709 + Stxbp2 protein_coding retained_intron MGP_LPJ_T0087755.1 MGP_LPJ_G0033228.1 mouse_genomes_project 8 567155 570952 + Stxbp2 protein_coding processed_transcript MGP_LPJ_T0087756.1 MGP_LPJ_G0033228.1 mouse_genomes_project 8 569563 572742 + Stxbp2 protein_coding processed_transcript MGP_LPJ_T0087757.1 MGP_LPJ_G0033228.1 mouse_genomes_project 8 570654 571885 + Stxbp2 protein_coding retained_intron MGP_LPJ_T0087758.1 MGP_LPJ_G0033228.1 mouse_genomes_project 8 570711 571970 + Stxbp2 protein_coding retained_intron MGP_LPJ_T0087759.1 MGP_LPJ_G0033228.1 mouse_genomes_project 8 570784 572736 + Stxbp2 protein_coding retained_intron MGP_LPJ_T0087760.1 MGP_LPJ_G0033228.1 mouse_genomes_project 8 571559 572743 + Stxbp2 protein_coding retained_intron MGP_LPJ_T0090664.1 MGP_LPJ_G0034159.1 mouse_genomes_project 8 127195690 127219693 + MGP_LPJ_P0090664 Def8 protein_coding protein_coding MGP_LPJ_T0090665.1 MGP_LPJ_G0034159.1 mouse_genomes_project 8 127195690 127215714 + MGP_LPJ_P0090665 Def8 protein_coding protein_coding MGP_LPJ_T0090666.1 MGP_LPJ_G0034159.1 mouse_genomes_project 8 127195690 127219693 + MGP_LPJ_P0090666 Def8 protein_coding protein_coding MGP_LPJ_T0090667.1 MGP_LPJ_G0034159.1 mouse_genomes_project 8 127195700 127208179 + MGP_LPJ_P0090667 Def8 protein_coding protein_coding MGP_LPJ_T0090668.1 MGP_LPJ_G0034159.1 mouse_genomes_project 8 127195709 127219693 + MGP_LPJ_P0090668 Def8 protein_coding protein_coding MGP_LPJ_T0090669.1 MGP_LPJ_G0034159.1 mouse_genomes_project 8 127195712 127208115 + MGP_LPJ_P0090669 Def8 protein_coding protein_coding MGP_LPJ_T0090670.1 MGP_LPJ_G0034159.1 mouse_genomes_project 8 127195716 127210837 + MGP_LPJ_P0090670 Def8 protein_coding protein_coding MGP_LPJ_T0090671.1 MGP_LPJ_G0034159.1 mouse_genomes_project 8 127196012 127219685 + MGP_LPJ_P0090671 Def8 protein_coding protein_coding MGP_LPJ_T0009198.1 MGP_LPJ_G0007390.1 mouse_genomes_project 8 124142380 124147076 + Gm10614 lincRNA lincRNA MGP_LPJ_T0089486.1 MGP_LPJ_G0033780.1 mouse_genomes_project 8 85874523 85879609 - MGP_LPJ_P0089486 Calr protein_coding protein_coding MGP_LPJ_T0089487.1 MGP_LPJ_G0033780.1 mouse_genomes_project 8 85875266 85877590 - Calr protein_coding retained_intron MGP_LPJ_T0089488.1 MGP_LPJ_G0033780.1 mouse_genomes_project 8 85878110 85879505 - Calr protein_coding retained_intron MGP_LPJ_T0089489.1 MGP_LPJ_G0033780.1 mouse_genomes_project 8 85878424 85879501 - Calr protein_coding retained_intron MGP_LPJ_T0090767.1 MGP_LPJ_G0034194.1 mouse_genomes_project 8 130269326 130375374 + MGP_LPJ_P0090767 Slc35f3 protein_coding protein_coding MGP_LPJ_T0090313.1 MGP_LPJ_G0034061.1 mouse_genomes_project 8 117242390 117263328 + MGP_LPJ_P0090313 Nudt7 protein_coding protein_coding MGP_LPJ_T0090314.1 MGP_LPJ_G0034061.1 mouse_genomes_project 8 117242407 117260893 + MGP_LPJ_P0090314 Nudt7 protein_coding protein_coding MGP_LPJ_T0090315.1 MGP_LPJ_G0034061.1 mouse_genomes_project 8 117242451 117260903 + MGP_LPJ_P0090315 Nudt7 protein_coding protein_coding MGP_LPJ_T0090316.1 MGP_LPJ_G0034061.1 mouse_genomes_project 8 117242474 117260897 + MGP_LPJ_P0090316 Nudt7 protein_coding protein_coding MGP_LPJ_T0090317.1 MGP_LPJ_G0034061.1 mouse_genomes_project 8 117242475 117256991 + MGP_LPJ_P0090317 Nudt7 protein_coding protein_coding MGP_LPJ_T0005388.1 MGP_LPJ_G0004567.1 mouse_genomes_project 8 66553982 66557333 - Gm15356 antisense antisense MGP_LPJ_T0099770.1 MGP_LPJ_G0038033.1 mouse_genomes_project 8 66096122 66096229 - Gm24205 snRNA snRNA MGP_LPJ_T0009122.1 MGP_LPJ_G0007337.1 mouse_genomes_project 8 68307074 68331979 - lincRNA lincRNA MGP_LPJ_T0009123.1 MGP_LPJ_G0007337.1 mouse_genomes_project 8 68331016 68332193 - lincRNA lincRNA MGP_LPJ_T0090725.1 MGP_LPJ_G0034178.1 mouse_genomes_project 8 128590515 128602394 + MGP_LPJ_P0090725 Arv1 protein_coding protein_coding MGP_LPJ_T0090660.1 MGP_LPJ_G0034156.1 mouse_genomes_project 8 127121870 127160209 + MGP_LPJ_P0090660 Tcf25 protein_coding protein_coding MGP_LPJ_T0090661.1 MGP_LPJ_G0034156.1 mouse_genomes_project 8 127121881 127162491 + MGP_LPJ_P0090661 Tcf25 protein_coding protein_coding MGP_LPJ_T0090485.1 MGP_LPJ_G0034113.1 mouse_genomes_project 8 124731354 124734087 + MGP_LPJ_P0090485 Foxl1 protein_coding protein_coding MGP_LPJ_T0088191.1 MGP_LPJ_G0033383.1 mouse_genomes_project 8 22722761 22792266 - MGP_LPJ_P0088191 Adam5 protein_coding protein_coding MGP_LPJ_T0088192.1 MGP_LPJ_G0033383.1 mouse_genomes_project 8 22722761 22800845 - MGP_LPJ_P0088192 Adam5 protein_coding protein_coding MGP_LPJ_T0088193.1 MGP_LPJ_G0033383.1 mouse_genomes_project 8 22722870 22800771 - Adam5 protein_coding processed_transcript MGP_LPJ_T0088194.1 MGP_LPJ_G0033383.1 mouse_genomes_project 8 22730440 22801155 - MGP_LPJ_P0088194 Adam5 protein_coding protein_coding MGP_LPJ_T0088619.1 MGP_LPJ_G0033517.1 mouse_genomes_project 8 53171605 53222786 - MGP_LPJ_P0088619 Neil3 protein_coding protein_coding MGP_LPJ_T0088620.1 MGP_LPJ_G0033517.1 mouse_genomes_project 8 53193104 53222399 - MGP_LPJ_P0088620 Neil3 protein_coding protein_coding MGP_LPJ_T0089324.1 MGP_LPJ_G0033733.1 mouse_genomes_project 8 84080870 84081964 - MGP_LPJ_P0089324 Gm10645 protein_coding protein_coding MGP_LPJ_T0005414.1 MGP_LPJ_G0004588.1 mouse_genomes_project 8 113685499 113687339 + Gm15895 antisense antisense MGP_LPJ_T0009191.1 MGP_LPJ_G0007385.1 mouse_genomes_project 8 111815005 111998873 + D030068K23Rik lincRNA lincRNA MGP_LPJ_T0009192.1 MGP_LPJ_G0007385.1 mouse_genomes_project 8 111815006 111975872 + D030068K23Rik lincRNA lincRNA MGP_LPJ_T0009193.1 MGP_LPJ_G0007385.1 mouse_genomes_project 8 111995209 112022838 + D030068K23Rik lincRNA lincRNA MGP_LPJ_T0015917.1 MGP_LPJ_G0014008.1 mouse_genomes_project 8 29549940 29550406 - processed_pseudogene processed_pseudogene MGP_LPJ_T0090385.1 MGP_LPJ_G0034087.1 mouse_genomes_project 8 122979136 123030491 - MGP_LPJ_P0090385 Mbtps1 protein_coding protein_coding MGP_LPJ_T0090386.1 MGP_LPJ_G0034087.1 mouse_genomes_project 8 122979136 123030491 - MGP_LPJ_P0090386 Mbtps1 protein_coding protein_coding MGP_LPJ_T0088058.1 MGP_LPJ_G0033320.1 mouse_genomes_project 8 16445032 16464869 - Xkr5 protein_coding processed_transcript MGP_LPJ_T0088059.1 MGP_LPJ_G0033320.1 mouse_genomes_project 8 16445032 16464973 - MGP_LPJ_P0088059 Xkr5 protein_coding protein_coding MGP_LPJ_T0088060.1 MGP_LPJ_G0033320.1 mouse_genomes_project 8 16445032 16464971 - MGP_LPJ_P0088060 Xkr5 protein_coding protein_coding MGP_LPJ_T0088061.1 MGP_LPJ_G0033320.1 mouse_genomes_project 8 16445035 16464914 - MGP_LPJ_P0088061 Xkr5 protein_coding nonsense_mediated_decay MGP_LPJ_T0088062.1 MGP_LPJ_G0033320.1 mouse_genomes_project 8 16445391 16464935 - MGP_LPJ_P0088062 Xkr5 protein_coding nonsense_mediated_decay MGP_LPJ_T0010995.1 MGP_LPJ_G0009113.1 mouse_genomes_project 8 73050357 73050431 - Mir7068 miRNA miRNA MGP_LPJ_T0090693.1 MGP_LPJ_G0034170.1 mouse_genomes_project 8 127833520 127865428 + MGP_LPJ_P0090693 Urb2 protein_coding nonsense_mediated_decay MGP_LPJ_T0090694.1 MGP_LPJ_G0034170.1 mouse_genomes_project 8 127837537 127865429 + MGP_LPJ_P0090694 Urb2 protein_coding protein_coding MGP_LPJ_T0088371.1 MGP_LPJ_G0033441.1 mouse_genomes_project 8 32594185 32607270 - MGP_LPJ_P0088371 Leprotl1 protein_coding protein_coding MGP_LPJ_T0088253.1 MGP_LPJ_G0033397.1 mouse_genomes_project 8 23835277 23853638 + MGP_LPJ_P0088253 Lsm1 protein_coding protein_coding MGP_LPJ_T0090580.1 MGP_LPJ_G0034136.1 mouse_genomes_project 8 126266743 126267068 + MGP_LPJ_P0090580 protein_coding protein_coding MGP_LPJ_T0087738.1 MGP_LPJ_G0033226.1 mouse_genomes_project 8 550958 553631 + MGP_LPJ_P0087738 Pet100 protein_coding protein_coding MGP_LPJ_T0088901.1 MGP_LPJ_G0033603.1 mouse_genomes_project 8 70472852 70499863 - Slc25a42 protein_coding retained_intron MGP_LPJ_T0088902.1 MGP_LPJ_G0033603.1 mouse_genomes_project 8 70472852 70499814 - MGP_LPJ_P0088902 Slc25a42 protein_coding protein_coding MGP_LPJ_T0088903.1 MGP_LPJ_G0033603.1 mouse_genomes_project 8 70472852 70499863 - MGP_LPJ_P0088903 Slc25a42 protein_coding protein_coding MGP_LPJ_T0088904.1 MGP_LPJ_G0033603.1 mouse_genomes_project 8 70476098 70499863 - Slc25a42 protein_coding retained_intron MGP_LPJ_T0088905.1 MGP_LPJ_G0033603.1 mouse_genomes_project 8 70480778 70499863 - Slc25a42 protein_coding retained_intron MGP_LPJ_T0101058.1 MGP_LPJ_G0039321.1 mouse_genomes_project 8 113718389 113718478 - Snord111 snoRNA snoRNA MGP_LPJ_T0088866.1 MGP_LPJ_G0033594.1 mouse_genomes_project 8 70332215 70360681 + MGP_LPJ_P0088866 Sugp1 protein_coding protein_coding MGP_LPJ_T0089631.1 MGP_LPJ_G0033821.1 mouse_genomes_project 8 88809916 89053372 - MGP_LPJ_P0089631 Zfp423 protein_coding protein_coding MGP_LPJ_T0089632.1 MGP_LPJ_G0033821.1 mouse_genomes_project 8 88810055 89116786 - MGP_LPJ_P0089632 Zfp423 protein_coding protein_coding MGP_LPJ_T0089633.1 MGP_LPJ_G0033821.1 mouse_genomes_project 8 88932022 89111481 - MGP_LPJ_P0089633 Zfp423 protein_coding protein_coding MGP_LPJ_T0089634.1 MGP_LPJ_G0033821.1 mouse_genomes_project 8 88932177 88956254 - MGP_LPJ_P0089634 Zfp423 protein_coding protein_coding MGP_LPJ_T0089635.1 MGP_LPJ_G0033821.1 mouse_genomes_project 8 88932346 89101672 - Zfp423 protein_coding processed_transcript MGP_LPJ_T0089636.1 MGP_LPJ_G0033821.1 mouse_genomes_project 8 88932363 89106351 - Zfp423 protein_coding processed_transcript MGP_LPJ_T0098318.1 MGP_LPJ_G0036599.1 mouse_genomes_project 8 46900125 46900249 + n-R5s96 rRNA rRNA MGP_LPJ_T0011030.1 MGP_LPJ_G0009148.1 mouse_genomes_project 8 110210922 110210992 + Mir140 miRNA miRNA MGP_LPJ_T0015928.1 MGP_LPJ_G0014019.1 mouse_genomes_project 8 40842421 40845161 + processed_pseudogene processed_pseudogene MGP_LPJ_T0090236.1 MGP_LPJ_G0034037.1 mouse_genomes_project 8 113936397 113941003 + MGP_LPJ_P0090236 Aars protein_coding protein_coding MGP_LPJ_T0090237.1 MGP_LPJ_G0034037.1 mouse_genomes_project 8 113937132 113950405 + Aars protein_coding retained_intron MGP_LPJ_T0090238.1 MGP_LPJ_G0034037.1 mouse_genomes_project 8 113937950 113962943 + MGP_LPJ_P0090238 Aars protein_coding protein_coding MGP_LPJ_T0090239.1 MGP_LPJ_G0034037.1 mouse_genomes_project 8 113937968 113952024 + Aars protein_coding retained_intron MGP_LPJ_T0090240.1 MGP_LPJ_G0034037.1 mouse_genomes_project 8 113947006 113948090 + Aars protein_coding retained_intron MGP_LPJ_T0090241.1 MGP_LPJ_G0034037.1 mouse_genomes_project 8 113948359 113950403 + Aars protein_coding retained_intron MGP_LPJ_T0090242.1 MGP_LPJ_G0034037.1 mouse_genomes_project 8 113953192 113955286 + Aars protein_coding retained_intron MGP_LPJ_T0099757.1 MGP_LPJ_G0038020.1 mouse_genomes_project 8 30578664 30578784 + Gm22140 snRNA snRNA MGP_LPJ_T0089106.1 MGP_LPJ_G0033659.1 mouse_genomes_project 8 71916012 71919146 - MGP_LPJ_P0089106 Bst2 protein_coding protein_coding MGP_LPJ_T0099792.1 MGP_LPJ_G0038055.1 mouse_genomes_project 8 116625468 116625630 - Gm24291 snRNA snRNA MGP_LPJ_T0088018.1 MGP_LPJ_G0033311.1 mouse_genomes_project 8 12275942 12289308 + MGP_LPJ_P0088018 Cln8 protein_coding protein_coding MGP_LPJ_T0088019.1 MGP_LPJ_G0033311.1 mouse_genomes_project 8 12282595 12289651 + MGP_LPJ_P0088019 Cln8 protein_coding protein_coding MGP_LPJ_T0088020.1 MGP_LPJ_G0033311.1 mouse_genomes_project 8 12282661 12296353 + MGP_LPJ_P0088020 Cln8 protein_coding protein_coding MGP_LPJ_T0088021.1 MGP_LPJ_G0033311.1 mouse_genomes_project 8 12283554 12289378 + MGP_LPJ_P0088021 Cln8 protein_coding protein_coding MGP_LPJ_T0088022.1 MGP_LPJ_G0033311.1 mouse_genomes_project 8 12283909 12289511 + MGP_LPJ_P0088022 Cln8 protein_coding protein_coding MGP_LPJ_T0088115.1 MGP_LPJ_G0033359.1 mouse_genomes_project 8 20226779 20247388 - MGP_LPJ_P0088115 Slc25a15 protein_coding unknown_likely_coding MGP_LPJ_T0015936.1 MGP_LPJ_G0014027.1 mouse_genomes_project 8 69025565 69026190 + processed_pseudogene processed_pseudogene MGP_LPJ_T0090800.1 MGP_LPJ_G0034202.1 mouse_genomes_project 8 132824089 132872550 + MGP_LPJ_P0090800 Itgb1 protein_coding protein_coding MGP_LPJ_T0090801.1 MGP_LPJ_G0034202.1 mouse_genomes_project 8 132824192 132871967 + MGP_LPJ_P0090801 Itgb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0090802.1 MGP_LPJ_G0034202.1 mouse_genomes_project 8 132824305 132850084 + Itgb1 protein_coding retained_intron MGP_LPJ_T0090803.1 MGP_LPJ_G0034202.1 mouse_genomes_project 8 132863650 132871739 + MGP_LPJ_P0090803 Itgb1 protein_coding protein_coding MGP_LPJ_T0089179.1 MGP_LPJ_G0033681.1 mouse_genomes_project 8 72736587 72759437 + MGP_LPJ_P0089179 Rab8a protein_coding protein_coding MGP_LPJ_T0089180.1 MGP_LPJ_G0033681.1 mouse_genomes_project 8 72736700 72751382 + Rab8a protein_coding processed_transcript MGP_LPJ_T0089181.1 MGP_LPJ_G0033681.1 mouse_genomes_project 8 72736746 72751576 + Rab8a protein_coding retained_intron MGP_LPJ_T0088064.1 MGP_LPJ_G0033322.1 mouse_genomes_project 8 16501389 16506199 - MGP_LPJ_P0088064 Defb37 protein_coding protein_coding MGP_LPJ_T0087849.1 MGP_LPJ_G0033258.1 mouse_genomes_project 8 5647381 5673412 - MGP_LPJ_P0087849 Arglu1 protein_coding protein_coding MGP_LPJ_T0089205.1 MGP_LPJ_G0033694.1 mouse_genomes_project 8 73159730 73176271 + MGP_LPJ_P0089205 Tmem38a protein_coding protein_coding MGP_LPJ_T0090389.1 MGP_LPJ_G0034090.1 mouse_genomes_project 8 123077179 123084495 - MGP_LPJ_P0090389 Taf1c protein_coding protein_coding MGP_LPJ_T0090390.1 MGP_LPJ_G0034090.1 mouse_genomes_project 8 123077179 123084495 - MGP_LPJ_P0090390 Taf1c protein_coding nonsense_mediated_decay MGP_LPJ_T0090391.1 MGP_LPJ_G0034090.1 mouse_genomes_project 8 123078023 123079050 - Taf1c protein_coding processed_transcript MGP_LPJ_T0090392.1 MGP_LPJ_G0034090.1 mouse_genomes_project 8 123078591 123079918 - Taf1c protein_coding retained_intron MGP_LPJ_T0090393.1 MGP_LPJ_G0034090.1 mouse_genomes_project 8 123078832 123080783 - Taf1c protein_coding processed_transcript MGP_LPJ_T0089756.1 MGP_LPJ_G0033858.1 mouse_genomes_project 8 95556358 95576297 - MGP_LPJ_P0089756 Nudt21 protein_coding protein_coding MGP_LPJ_T0101013.1 MGP_LPJ_G0039276.1 mouse_genomes_project 8 16097658 16097787 - Gm25763 snoRNA snoRNA MGP_LPJ_T0089403.1 MGP_LPJ_G0033761.1 mouse_genomes_project 8 85082321 85089685 - MGP_LPJ_P0089403 Dcaf15 protein_coding protein_coding MGP_LPJ_T0089404.1 MGP_LPJ_G0033761.1 mouse_genomes_project 8 85082699 85089660 - MGP_LPJ_P0089404 Dcaf15 protein_coding unknown_likely_coding MGP_LPJ_T0101035.1 MGP_LPJ_G0039298.1 mouse_genomes_project 8 63879466 63879597 + Gm24580 snoRNA snoRNA MGP_LPJ_T0090110.1 MGP_LPJ_G0033994.1 mouse_genomes_project 8 109474407 109504316 + MGP_LPJ_P0090110 Cirh1a protein_coding protein_coding MGP_LPJ_T0088595.1 MGP_LPJ_G0033508.1 mouse_genomes_project 8 46890213 46894809 - MGP_LPJ_P0088595 Cdkn2aip protein_coding protein_coding MGP_LPJ_T0005420.1 MGP_LPJ_G0004594.1 mouse_genomes_project 8 118886815 118888955 + Gm15655 antisense antisense MGP_LPJ_T0090068.1 MGP_LPJ_G0033978.1 mouse_genomes_project 8 108535909 108562296 + MGP_LPJ_P0090068 Dus2 protein_coding protein_coding MGP_LPJ_T0090070.1 MGP_LPJ_G0033978.1 mouse_genomes_project 8 108556781 108603339 + MGP_LPJ_P0090070 Dus2 protein_coding nonsense_mediated_decay MGP_LPJ_T0090071.1 MGP_LPJ_G0033978.1 mouse_genomes_project 8 108556781 108603318 + MGP_LPJ_P0090071 Dus2 protein_coding protein_coding MGP_LPJ_T0090072.1 MGP_LPJ_G0033978.1 mouse_genomes_project 8 108556796 108579978 + Dus2 protein_coding retained_intron MGP_LPJ_T0090073.1 MGP_LPJ_G0033978.1 mouse_genomes_project 8 108583251 108595861 + Dus2 protein_coding retained_intron MGP_LPJ_T0090074.1 MGP_LPJ_G0033978.1 mouse_genomes_project 8 108598206 108601698 + Dus2 protein_coding retained_intron MGP_LPJ_T0009139.1 MGP_LPJ_G0007351.1 mouse_genomes_project 8 85198413 85199100 + Gm26532 lincRNA lincRNA MGP_LPJ_T0011021.1 MGP_LPJ_G0009139.1 mouse_genomes_project 8 97392526 97392590 - Mir7073 miRNA miRNA MGP_LPJ_T0090350.1 MGP_LPJ_G0034074.1 mouse_genomes_project 8 120358510 120399103 + MGP_LPJ_P0090350 Bco1 protein_coding protein_coding MGP_LPJ_T0090351.1 MGP_LPJ_G0034074.1 mouse_genomes_project 8 120358521 120396604 + MGP_LPJ_P0090351 Bco1 protein_coding protein_coding MGP_LPJ_T0090352.1 MGP_LPJ_G0034074.1 mouse_genomes_project 8 120358654 120398702 + MGP_LPJ_P0090352 Bco1 protein_coding protein_coding MGP_LPJ_T0088969.1 MGP_LPJ_G0033617.1 mouse_genomes_project 8 70804914 70807101 - MGP_LPJ_P0088969 protein_coding protein_coding MGP_LPJ_T0088970.1 MGP_LPJ_G0033617.1 mouse_genomes_project 8 70804914 70807327 - MGP_LPJ_P0088970 protein_coding protein_coding MGP_LPJ_T0088971.1 MGP_LPJ_G0033617.1 mouse_genomes_project 8 70804914 70807096 - MGP_LPJ_P0088971 protein_coding protein_coding MGP_LPJ_T0088972.1 MGP_LPJ_G0033617.1 mouse_genomes_project 8 70804915 70807125 - protein_coding retained_intron MGP_LPJ_T0088973.1 MGP_LPJ_G0033617.1 mouse_genomes_project 8 70804917 70807163 - MGP_LPJ_P0088973 protein_coding protein_coding MGP_LPJ_T0088975.1 MGP_LPJ_G0033617.1 mouse_genomes_project 8 70804979 70807547 - MGP_LPJ_P0088975 protein_coding protein_coding MGP_LPJ_T0088976.1 MGP_LPJ_G0033617.1 mouse_genomes_project 8 70804983 70806286 - MGP_LPJ_P0088976 protein_coding protein_coding MGP_LPJ_T0088977.1 MGP_LPJ_G0033617.1 mouse_genomes_project 8 70805081 70806686 - MGP_LPJ_P0088977 protein_coding protein_coding MGP_LPJ_T0087972.1 MGP_LPJ_G0033294.1 mouse_genomes_project 8 10670522 10689167 + MGP_LPJ_P0087972 Grk1 protein_coding protein_coding MGP_LPJ_T0089294.1 MGP_LPJ_G0033723.1 mouse_genomes_project 8 80749907 80778279 - Hhip protein_coding processed_transcript MGP_LPJ_T0089295.1 MGP_LPJ_G0033723.1 mouse_genomes_project 8 80758279 80848188 - MGP_LPJ_P0089295 Hhip protein_coding protein_coding MGP_LPJ_T0089490.1 MGP_LPJ_G0033781.1 mouse_genomes_project 8 85886385 85889250 - MGP_LPJ_P0089490 protein_coding protein_coding MGP_LPJ_T0088161.1 MGP_LPJ_G0033373.1 mouse_genomes_project 8 21122626 21136231 - MGP_LPJ_P0088161 Gins4 protein_coding protein_coding MGP_LPJ_T0009219.1 MGP_LPJ_G0007406.1 mouse_genomes_project 8 127535270 127546369 - 4732419C18Rik lincRNA lincRNA MGP_LPJ_T0099777.1 MGP_LPJ_G0038040.1 mouse_genomes_project 8 83048523 83048586 - Gm25267 snRNA snRNA MGP_LPJ_T0088655.1 MGP_LPJ_G0033533.1 mouse_genomes_project 8 57265572 57400336 - MGP_LPJ_P0088655 Galnt7 protein_coding protein_coding MGP_LPJ_T0088656.1 MGP_LPJ_G0033533.1 mouse_genomes_project 8 57266444 57400336 - MGP_LPJ_P0088656 Galnt7 protein_coding protein_coding MGP_LPJ_T0088657.1 MGP_LPJ_G0033533.1 mouse_genomes_project 8 57267768 57280187 - Galnt7 protein_coding processed_transcript MGP_LPJ_T0088658.1 MGP_LPJ_G0033533.1 mouse_genomes_project 8 57283728 57400336 - Galnt7 protein_coding retained_intron MGP_LPJ_T0099776.1 MGP_LPJ_G0038039.1 mouse_genomes_project 8 79761815 79761922 - Gm22044 snRNA snRNA MGP_LPJ_T0099791.1 MGP_LPJ_G0038054.1 mouse_genomes_project 8 115058410 115058517 + Gm22827 snRNA snRNA MGP_LPJ_T0088159.1 MGP_LPJ_G0033371.1 mouse_genomes_project 8 21044041 21049732 + MGP_LPJ_P0088159 Nkx6-3 protein_coding protein_coding MGP_LPJ_T0009178.1 MGP_LPJ_G0007375.1 mouse_genomes_project 8 95277650 95340714 - Gm26843 lincRNA lincRNA MGP_LPJ_T0089193.1 MGP_LPJ_G0033688.1 mouse_genomes_project 8 73001609 73022591 - MGP_LPJ_P0089193 Calr3 protein_coding protein_coding MGP_LPJ_T0089194.1 MGP_LPJ_G0033688.1 mouse_genomes_project 8 73001616 73012021 - MGP_LPJ_P0089194 Calr3 protein_coding protein_coding MGP_LPJ_T0089860.1 MGP_LPJ_G0033894.1 mouse_genomes_project 8 97060549 97103272 - MGP_LPJ_P0089860 Csnk2a2 protein_coding protein_coding MGP_LPJ_T0011013.1 MGP_LPJ_G0009131.1 mouse_genomes_project 8 86168050 86168107 - Gm23388 miRNA miRNA MGP_LPJ_T0089579.1 MGP_LPJ_G0033801.1 mouse_genomes_project 8 86137966 86139337 + Wdr83os protein_coding retained_intron MGP_LPJ_T0089580.1 MGP_LPJ_G0033801.1 mouse_genomes_project 8 86138004 86139335 + MGP_LPJ_P0089580 Wdr83os protein_coding protein_coding MGP_LPJ_T0088539.1 MGP_LPJ_G0033492.1 mouse_genomes_project 8 45126110 45249244 - MGP_LPJ_P0088539 Snx25 protein_coding protein_coding MGP_LPJ_T0088540.1 MGP_LPJ_G0033492.1 mouse_genomes_project 8 45126125 45210830 - Snx25 protein_coding retained_intron MGP_LPJ_T0088541.1 MGP_LPJ_G0033492.1 mouse_genomes_project 8 45126306 45173626 - MGP_LPJ_P0088541 Snx25 protein_coding protein_coding MGP_LPJ_T0088542.1 MGP_LPJ_G0033492.1 mouse_genomes_project 8 45142257 45149306 - Snx25 protein_coding processed_transcript MGP_LPJ_T0088543.1 MGP_LPJ_G0033492.1 mouse_genomes_project 8 45148929 45218257 - MGP_LPJ_P0088543 Snx25 protein_coding nonsense_mediated_decay MGP_LPJ_T0088544.1 MGP_LPJ_G0033492.1 mouse_genomes_project 8 45148973 45183027 - Snx25 protein_coding processed_transcript MGP_LPJ_T0088545.1 MGP_LPJ_G0033492.1 mouse_genomes_project 8 45173183 45198889 - Snx25 protein_coding retained_intron MGP_LPJ_T0090424.1 MGP_LPJ_G0034101.1 mouse_genomes_project 8 123632534 123688211 + MGP_LPJ_P0090424 6430548M08Rik protein_coding protein_coding MGP_LPJ_T0090425.1 MGP_LPJ_G0034101.1 mouse_genomes_project 8 123632534 123677529 + MGP_LPJ_P0090425 6430548M08Rik protein_coding protein_coding MGP_LPJ_T0090426.1 MGP_LPJ_G0034101.1 mouse_genomes_project 8 123632535 123688209 + MGP_LPJ_P0090426 6430548M08Rik protein_coding protein_coding MGP_LPJ_T0090427.1 MGP_LPJ_G0034101.1 mouse_genomes_project 8 123667437 123668493 + MGP_LPJ_P0090427 6430548M08Rik protein_coding protein_coding MGP_LPJ_T0090428.1 MGP_LPJ_G0034101.1 mouse_genomes_project 8 123667678 123675500 + MGP_LPJ_P0090428 6430548M08Rik protein_coding protein_coding MGP_LPJ_T0090429.1 MGP_LPJ_G0034101.1 mouse_genomes_project 8 123667903 123685793 + MGP_LPJ_P0090429 6430548M08Rik protein_coding protein_coding MGP_LPJ_T0090430.1 MGP_LPJ_G0034101.1 mouse_genomes_project 8 123678768 123684291 + 6430548M08Rik protein_coding processed_transcript MGP_LPJ_T0088659.1 MGP_LPJ_G0033534.1 mouse_genomes_project 8 57523806 58700493 - MGP_LPJ_P0088659 Galntl6 protein_coding protein_coding MGP_LPJ_T0088660.1 MGP_LPJ_G0033534.1 mouse_genomes_project 8 57526951 57738371 - MGP_LPJ_P0088660 Galntl6 protein_coding protein_coding MGP_LPJ_T0088661.1 MGP_LPJ_G0033534.1 mouse_genomes_project 8 57544630 57606065 - Galntl6 protein_coding processed_transcript MGP_LPJ_T0088662.1 MGP_LPJ_G0033534.1 mouse_genomes_project 8 58200789 58699480 - Galntl6 protein_coding retained_intron MGP_LPJ_T0088663.1 MGP_LPJ_G0033534.1 mouse_genomes_project 8 58200875 58699429 - MGP_LPJ_P0088663 Galntl6 protein_coding nonsense_mediated_decay MGP_LPJ_T0088664.1 MGP_LPJ_G0033534.1 mouse_genomes_project 8 58200995 58481789 - MGP_LPJ_P0088664 Galntl6 protein_coding protein_coding MGP_LPJ_T0088665.1 MGP_LPJ_G0033534.1 mouse_genomes_project 8 58264137 58481809 - Galntl6 protein_coding processed_transcript MGP_LPJ_T0088666.1 MGP_LPJ_G0033534.1 mouse_genomes_project 8 58302920 58699713 - MGP_LPJ_P0088666 Galntl6 protein_coding protein_coding MGP_LPJ_T0090766.1 MGP_LPJ_G0034193.1 mouse_genomes_project 8 129939159 129976107 + MGP_LPJ_P0090766 Kcnk1 protein_coding protein_coding MGP_LPJ_T0010973.1 MGP_LPJ_G0009091.1 mouse_genomes_project 8 13542443 13542525 - Mir3106 miRNA miRNA MGP_LPJ_T0101043.1 MGP_LPJ_G0039306.1 mouse_genomes_project 8 76591985 76592112 - Gm22544 snoRNA snoRNA MGP_LPJ_T0089587.1 MGP_LPJ_G0033807.1 mouse_genomes_project 8 86363011 86406860 - MGP_LPJ_P0089587 Mylk3 protein_coding protein_coding MGP_LPJ_T0089588.1 MGP_LPJ_G0033807.1 mouse_genomes_project 8 86363155 86425154 - MGP_LPJ_P0089588 Mylk3 protein_coding protein_coding MGP_LPJ_T0089589.1 MGP_LPJ_G0033807.1 mouse_genomes_project 8 86365816 86406883 - MGP_LPJ_P0089589 Mylk3 protein_coding protein_coding MGP_LPJ_T0089590.1 MGP_LPJ_G0033807.1 mouse_genomes_project 8 86399870 86430339 - MGP_LPJ_P0089590 Mylk3 protein_coding protein_coding MGP_LPJ_T0089591.1 MGP_LPJ_G0033807.1 mouse_genomes_project 8 86401045 86425210 - Mylk3 protein_coding retained_intron MGP_LPJ_T0087892.1 MGP_LPJ_G0033276.1 mouse_genomes_project 8 9600134 9607202 + MGP_LPJ_P0087892 Sox1 protein_coding protein_coding MGP_LPJ_T0101007.1 MGP_LPJ_G0039270.1 mouse_genomes_project 8 4592320 4592449 + Gm25169 snoRNA snoRNA MGP_LPJ_T0009113.1 MGP_LPJ_G0007328.1 mouse_genomes_project 8 44652956 44664505 - lincRNA lincRNA MGP_LPJ_T0005364.1 MGP_LPJ_G0004548.1 mouse_genomes_project 8 13817244 13819970 + antisense antisense MGP_LPJ_T0005365.1 MGP_LPJ_G0004548.1 mouse_genomes_project 8 13817255 13821107 + antisense antisense MGP_LPJ_T0087780.1 MGP_LPJ_G0033240.1 mouse_genomes_project 8 994260 995589 - protein_coding retained_intron MGP_LPJ_T0088293.1 MGP_LPJ_G0033412.1 mouse_genomes_project 8 25282721 25321852 - MGP_LPJ_P0088293 Rab11fip1 protein_coding protein_coding MGP_LPJ_T0088294.1 MGP_LPJ_G0033412.1 mouse_genomes_project 8 25282721 25321852 - MGP_LPJ_P0088294 Rab11fip1 protein_coding protein_coding MGP_LPJ_T0011026.1 MGP_LPJ_G0009144.1 mouse_genomes_project 8 107784460 107784557 - Mir328 miRNA miRNA MGP_LPJ_T0088286.1 MGP_LPJ_G0033409.1 mouse_genomes_project 8 25179981 25193558 + MGP_LPJ_P0088286 Prosc protein_coding protein_coding MGP_LPJ_T0088287.1 MGP_LPJ_G0033409.1 mouse_genomes_project 8 25179981 25187667 + MGP_LPJ_P0088287 Prosc protein_coding protein_coding MGP_LPJ_T0098677.1 MGP_LPJ_G0036946.1 mouse_genomes_project 8 68011253 68011643 - sense_intronic sense_intronic MGP_LPJ_T0087878.1 MGP_LPJ_G0033272.1 mouse_genomes_project 8 8811468 8835037 - MGP_LPJ_P0087878 1700016D06Rik protein_coding protein_coding MGP_LPJ_T0087879.1 MGP_LPJ_G0033272.1 mouse_genomes_project 8 8812021 8817292 - 1700016D06Rik protein_coding processed_transcript MGP_LPJ_T0087880.1 MGP_LPJ_G0033272.1 mouse_genomes_project 8 8812022 8869899 - MGP_LPJ_P0087880 1700016D06Rik protein_coding protein_coding MGP_LPJ_T0087881.1 MGP_LPJ_G0033272.1 mouse_genomes_project 8 8812023 8819169 - MGP_LPJ_P0087881 1700016D06Rik protein_coding protein_coding MGP_LPJ_T0011042.1 MGP_LPJ_G0009160.1 mouse_genomes_project 8 123983264 123983355 - Gm22715 miRNA miRNA MGP_LPJ_T0088443.1 MGP_LPJ_G0033468.1 mouse_genomes_project 8 39864915 40009931 - MGP_LPJ_P0088443 Mtus1 protein_coding protein_coding MGP_LPJ_T0088444.1 MGP_LPJ_G0033468.1 mouse_genomes_project 8 39864919 39991004 - MGP_LPJ_P0088444 Mtus1 protein_coding protein_coding MGP_LPJ_T0088445.1 MGP_LPJ_G0033468.1 mouse_genomes_project 8 39864919 39930538 - MGP_LPJ_P0088445 Mtus1 protein_coding protein_coding MGP_LPJ_T0088446.1 MGP_LPJ_G0033468.1 mouse_genomes_project 8 39865053 39916114 - MGP_LPJ_P0088446 Mtus1 protein_coding protein_coding MGP_LPJ_T0088447.1 MGP_LPJ_G0033468.1 mouse_genomes_project 8 39872734 39874170 - Mtus1 protein_coding retained_intron MGP_LPJ_T0088448.1 MGP_LPJ_G0033468.1 mouse_genomes_project 8 39874640 39891052 - Mtus1 protein_coding processed_transcript MGP_LPJ_T0088449.1 MGP_LPJ_G0033468.1 mouse_genomes_project 8 39874797 39891066 - MGP_LPJ_P0088449 Mtus1 protein_coding protein_coding MGP_LPJ_T0088450.1 MGP_LPJ_G0033468.1 mouse_genomes_project 8 39876316 39890617 - MGP_LPJ_P0088450 Mtus1 protein_coding protein_coding MGP_LPJ_T0088451.1 MGP_LPJ_G0033468.1 mouse_genomes_project 8 39888637 39913856 - Mtus1 protein_coding processed_transcript MGP_LPJ_T0088452.1 MGP_LPJ_G0033468.1 mouse_genomes_project 8 39893261 39930527 - Mtus1 protein_coding processed_transcript MGP_LPJ_T0088453.1 MGP_LPJ_G0033468.1 mouse_genomes_project 8 39893822 39897155 - Mtus1 protein_coding retained_intron MGP_LPJ_T0088454.1 MGP_LPJ_G0033468.1 mouse_genomes_project 8 39925606 40009931 - MGP_LPJ_P0088454 Mtus1 protein_coding protein_coding MGP_LPJ_T0088455.1 MGP_LPJ_G0033468.1 mouse_genomes_project 8 39925761 39960422 - MGP_LPJ_P0088455 Mtus1 protein_coding protein_coding MGP_LPJ_T0088456.1 MGP_LPJ_G0033468.1 mouse_genomes_project 8 39962208 40009923 - MGP_LPJ_P0088456 Mtus1 protein_coding protein_coding MGP_LPJ_T0088412.1 MGP_LPJ_G0033461.1 mouse_genomes_project 8 39250496 39307660 + MGP_LPJ_P0088412 Zdhhc2 protein_coding protein_coding MGP_LPJ_T0088413.1 MGP_LPJ_G0033461.1 mouse_genomes_project 8 39250502 39334551 + MGP_LPJ_P0088413 Zdhhc2 protein_coding protein_coding MGP_LPJ_T0088414.1 MGP_LPJ_G0033461.1 mouse_genomes_project 8 39250503 39292397 + Zdhhc2 protein_coding retained_intron MGP_LPJ_T0088415.1 MGP_LPJ_G0033461.1 mouse_genomes_project 8 39271466 39306199 + MGP_LPJ_P0088415 Zdhhc2 protein_coding protein_coding MGP_LPJ_T0088423.1 MGP_LPJ_G0033461.1 mouse_genomes_project 8 39324849 39334553 + Zdhhc2 protein_coding processed_transcript MGP_LPJ_T0090581.1 MGP_LPJ_G0034137.1 mouse_genomes_project 8 126296647 126302242 + MGP_LPJ_P0090581 Trappc2l protein_coding protein_coding MGP_LPJ_T0090035.1 MGP_LPJ_G0033962.1 mouse_genomes_project 8 108218262 108220216 + MGP_LPJ_P0090035 4933405L10Rik protein_coding protein_coding MGP_LPJ_T0087971.1 MGP_LPJ_G0033293.1 mouse_genomes_project 8 10645622 10654356 - MGP_LPJ_P0087971 Atp4b protein_coding protein_coding MGP_LPJ_T0015895.1 MGP_LPJ_G0013986.1 mouse_genomes_project 8 1708688 1709084 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005402.1 MGP_LPJ_G0004579.1 mouse_genomes_project 8 100788457 100810295 + Gm15679 antisense antisense MGP_LPJ_T0089027.1 MGP_LPJ_G0033636.1 mouse_genomes_project 8 71131333 71144939 + MGP_LPJ_P0089027 Il12rb1 protein_coding protein_coding MGP_LPJ_T0089385.1 MGP_LPJ_G0033752.1 mouse_genomes_project 8 84975165 84977091 + MGP_LPJ_P0089385 protein_coding unknown_likely_coding MGP_LPJ_T0005399.1 MGP_LPJ_G0004576.1 mouse_genomes_project 8 86378532 86382637 + antisense antisense MGP_LPJ_T0089201.1 MGP_LPJ_G0033692.1 mouse_genomes_project 8 73079290 73134112 - MGP_LPJ_P0089201 Med26 protein_coding protein_coding MGP_LPJ_T0099774.1 MGP_LPJ_G0038037.1 mouse_genomes_project 8 78211666 78211774 - Gm23468 snRNA snRNA MGP_LPJ_T0101030.1 MGP_LPJ_G0039293.1 mouse_genomes_project 8 56238247 56238379 - Gm24375 snoRNA snoRNA MGP_LPJ_T0011739.1 MGP_LPJ_G0009857.1 mouse_genomes_project 8 96280374 96280644 - Gm22846 misc_RNA misc_RNA MGP_LPJ_T0088385.1 MGP_LPJ_G0033452.1 mouse_genomes_project 8 34829406 34864905 - MGP_LPJ_P0088385 Lonrf1 protein_coding protein_coding MGP_LPJ_T0005361.1 MGP_LPJ_G0004545.1 mouse_genomes_project 8 12361162 12361683 - Gm16350 antisense antisense MGP_LPJ_T0088758.1 MGP_LPJ_G0033559.1 mouse_genomes_project 8 66590715 66602878 - Tma16 protein_coding retained_intron MGP_LPJ_T0088759.1 MGP_LPJ_G0033559.1 mouse_genomes_project 8 66592766 66602900 - MGP_LPJ_P0088759 Tma16 protein_coding protein_coding MGP_LPJ_T0088760.1 MGP_LPJ_G0033559.1 mouse_genomes_project 8 66598775 66602911 - Tma16 protein_coding retained_intron MGP_LPJ_T0089727.1 MGP_LPJ_G0033851.1 mouse_genomes_project 8 94696471 94736477 - MGP_LPJ_P0089727 Ces1e protein_coding protein_coding MGP_LPJ_T0089728.1 MGP_LPJ_G0033851.1 mouse_genomes_project 8 94696657 94736476 - MGP_LPJ_P0089728 Ces1e protein_coding protein_coding MGP_LPJ_T0089729.1 MGP_LPJ_G0033851.1 mouse_genomes_project 8 94711728 94720915 - Ces1e protein_coding retained_intron MGP_LPJ_T0090116.1 MGP_LPJ_G0033998.1 mouse_genomes_project 8 109640837 109652164 - MGP_LPJ_P0090116 Cog8 protein_coding protein_coding MGP_LPJ_T0090117.1 MGP_LPJ_G0033998.1 mouse_genomes_project 8 109640843 109652159 - MGP_LPJ_P0090117 Cog8 protein_coding protein_coding MGP_LPJ_T0090119.1 MGP_LPJ_G0033998.1 mouse_genomes_project 8 109648156 109649736 - Cog8 protein_coding retained_intron MGP_LPJ_T0090120.1 MGP_LPJ_G0033998.1 mouse_genomes_project 8 109648386 109651973 - MGP_LPJ_P0090120 Cog8 protein_coding nonsense_mediated_decay MGP_LPJ_T0089991.1 MGP_LPJ_G0033946.1 mouse_genomes_project 8 107804434 107825674 - Fhod1 protein_coding retained_intron MGP_LPJ_T0089992.1 MGP_LPJ_G0033946.1 mouse_genomes_project 8 107804434 107825718 - MGP_LPJ_P0089992 Fhod1 protein_coding protein_coding MGP_LPJ_T0089993.1 MGP_LPJ_G0033946.1 mouse_genomes_project 8 107806211 107806838 - Fhod1 protein_coding retained_intron MGP_LPJ_T0089994.1 MGP_LPJ_G0033946.1 mouse_genomes_project 8 107812850 107814205 - Fhod1 protein_coding retained_intron MGP_LPJ_T0088117.1 MGP_LPJ_G0033361.1 mouse_genomes_project 8 20315120 20329384 - MGP_LPJ_P0088117 Smim19 protein_coding protein_coding MGP_LPJ_T0088118.1 MGP_LPJ_G0033361.1 mouse_genomes_project 8 20315120 20329384 - MGP_LPJ_P0088118 Smim19 protein_coding protein_coding MGP_LPJ_T0088321.1 MGP_LPJ_G0033426.1 mouse_genomes_project 8 30094417 30097124 - MGP_LPJ_P0088321 protein_coding protein_coding MGP_LPJ_T0018408.1 MGP_LPJ_G0015631.1 mouse_genomes_project 8 44799192 44815827 + processed_transcript processed_transcript MGP_LPJ_T0088333.1 MGP_LPJ_G0033433.1 mouse_genomes_project 8 32011732 32031792 + MGP_LPJ_P0088333 Ppp2cb protein_coding protein_coding MGP_LPJ_T0089986.1 MGP_LPJ_G0033945.1 mouse_genomes_project 8 107801625 107804329 + MGP_LPJ_P0089986 Tmem208 protein_coding protein_coding MGP_LPJ_T0089987.1 MGP_LPJ_G0033945.1 mouse_genomes_project 8 107801633 107804327 + MGP_LPJ_P0089987 Tmem208 protein_coding nonsense_mediated_decay MGP_LPJ_T0089988.1 MGP_LPJ_G0033945.1 mouse_genomes_project 8 107801659 107804324 + MGP_LPJ_P0089988 Tmem208 protein_coding nonsense_mediated_decay MGP_LPJ_T0089989.1 MGP_LPJ_G0033945.1 mouse_genomes_project 8 107801666 107811517 + MGP_LPJ_P0089989 Tmem208 protein_coding protein_coding MGP_LPJ_T0089990.1 MGP_LPJ_G0033945.1 mouse_genomes_project 8 107801726 107811099 + MGP_LPJ_P0089990 Tmem208 protein_coding nonsense_mediated_decay MGP_LPJ_T0089699.1 MGP_LPJ_G0033839.1 mouse_genomes_project 8 92673666 93041058 + MGP_LPJ_P0089699 Fto protein_coding protein_coding MGP_LPJ_T0089700.1 MGP_LPJ_G0033839.1 mouse_genomes_project 8 92673669 92796068 + Fto protein_coding retained_intron MGP_LPJ_T0089701.1 MGP_LPJ_G0033839.1 mouse_genomes_project 8 92673692 92890112 + Fto protein_coding retained_intron MGP_LPJ_T0089702.1 MGP_LPJ_G0033839.1 mouse_genomes_project 8 92673702 92844032 + Fto protein_coding retained_intron MGP_LPJ_T0089703.1 MGP_LPJ_G0033839.1 mouse_genomes_project 8 92749130 92771245 + MGP_LPJ_P0089703 Fto protein_coding protein_coding MGP_LPJ_T0089704.1 MGP_LPJ_G0033839.1 mouse_genomes_project 8 92751952 92770869 + MGP_LPJ_P0089704 Fto protein_coding protein_coding MGP_LPJ_T0089705.1 MGP_LPJ_G0033839.1 mouse_genomes_project 8 92819468 93039566 + Fto protein_coding processed_transcript MGP_LPJ_T0088728.1 MGP_LPJ_G0033549.1 mouse_genomes_project 8 64030220 64239757 - MGP_LPJ_P0088728 Tll1 protein_coding protein_coding MGP_LPJ_T0089199.1 MGP_LPJ_G0033691.1 mouse_genomes_project 8 73061857 73077391 - MGP_LPJ_P0089199 Slc35e1 protein_coding protein_coding MGP_LPJ_T0089200.1 MGP_LPJ_G0033691.1 mouse_genomes_project 8 73068162 73076994 - MGP_LPJ_P0089200 Slc35e1 protein_coding protein_coding MGP_LPJ_T0011024.1 MGP_LPJ_G0009142.1 mouse_genomes_project 8 107052952 107053027 - Gm44328 miRNA miRNA MGP_LPJ_T0090558.1 MGP_LPJ_G0034131.1 mouse_genomes_project 8 126142419 126149640 + MGP_LPJ_P0090558 Ctu2 protein_coding protein_coding MGP_LPJ_T0090559.1 MGP_LPJ_G0034131.1 mouse_genomes_project 8 126142485 126150686 + MGP_LPJ_P0090559 Ctu2 protein_coding nonsense_mediated_decay MGP_LPJ_T0090560.1 MGP_LPJ_G0034131.1 mouse_genomes_project 8 126142489 126148289 + Ctu2 protein_coding retained_intron MGP_LPJ_T0090561.1 MGP_LPJ_G0034131.1 mouse_genomes_project 8 126142489 126145284 + MGP_LPJ_P0090561 Ctu2 protein_coding protein_coding MGP_LPJ_T0090562.1 MGP_LPJ_G0034131.1 mouse_genomes_project 8 126142496 126146414 + MGP_LPJ_P0090562 Ctu2 protein_coding protein_coding MGP_LPJ_T0090563.1 MGP_LPJ_G0034131.1 mouse_genomes_project 8 126142519 126146019 + Ctu2 protein_coding retained_intron MGP_LPJ_T0090564.1 MGP_LPJ_G0034131.1 mouse_genomes_project 8 126143763 126145316 + Ctu2 protein_coding retained_intron MGP_LPJ_T0090565.1 MGP_LPJ_G0034131.1 mouse_genomes_project 8 126147469 126148288 + Ctu2 protein_coding retained_intron MGP_LPJ_T0090566.1 MGP_LPJ_G0034131.1 mouse_genomes_project 8 126147504 126148292 + MGP_LPJ_P0090566 Ctu2 protein_coding protein_coding MGP_LPJ_T0090106.1 MGP_LPJ_G0033993.1 mouse_genomes_project 8 109465023 109474361 - MGP_LPJ_P0090106 Chtf8 protein_coding protein_coding MGP_LPJ_T0090107.1 MGP_LPJ_G0033993.1 mouse_genomes_project 8 109466712 109474359 - MGP_LPJ_P0090107 Chtf8 protein_coding protein_coding MGP_LPJ_T0090108.1 MGP_LPJ_G0033993.1 mouse_genomes_project 8 109466811 109474283 - MGP_LPJ_P0090108 Chtf8 protein_coding protein_coding MGP_LPJ_T0090109.1 MGP_LPJ_G0033993.1 mouse_genomes_project 8 109466888 109474369 - MGP_LPJ_P0090109 Chtf8 protein_coding protein_coding MGP_LPJ_T0010997.1 MGP_LPJ_G0009115.1 mouse_genomes_project 8 74190331 74190440 - Gm23255 miRNA miRNA MGP_LPJ_T0009137.1 MGP_LPJ_G0007349.1 mouse_genomes_project 8 84856407 84868891 - Gm26721 lincRNA lincRNA MGP_LPJ_T0087705.1 MGP_LPJ_G0033217.1 mouse_genomes_project 8 253736 362614 + MGP_LPJ_P0087705 Arhgef18 protein_coding protein_coding MGP_LPJ_T0087706.1 MGP_LPJ_G0033217.1 mouse_genomes_project 8 296089 356644 + Arhgef18 protein_coding retained_intron MGP_LPJ_T0087707.1 MGP_LPJ_G0033217.1 mouse_genomes_project 8 296156 334800 + Arhgef18 protein_coding processed_transcript MGP_LPJ_T0087708.1 MGP_LPJ_G0033217.1 mouse_genomes_project 8 296156 335168 + MGP_LPJ_P0087708 Arhgef18 protein_coding protein_coding MGP_LPJ_T0087709.1 MGP_LPJ_G0033217.1 mouse_genomes_project 8 342578 362604 + Arhgef18 protein_coding retained_intron MGP_LPJ_T0087710.1 MGP_LPJ_G0033217.1 mouse_genomes_project 8 356761 360272 + Arhgef18 protein_coding retained_intron MGP_LPJ_T0088598.1 MGP_LPJ_G0033511.1 mouse_genomes_project 8 47014630 47019103 + MGP_LPJ_P0088598 Cldn22 protein_coding protein_coding MGP_LPJ_T0087882.1 MGP_LPJ_G0033273.1 mouse_genomes_project 8 8896812 8998690 + MGP_LPJ_P0087882 Arhgef7 protein_coding protein_coding MGP_LPJ_T0087883.1 MGP_LPJ_G0033273.1 mouse_genomes_project 8 8896959 9002787 + MGP_LPJ_P0087883 Arhgef7 protein_coding protein_coding MGP_LPJ_T0087884.1 MGP_LPJ_G0033273.1 mouse_genomes_project 8 8952927 9010858 + MGP_LPJ_P0087884 Arhgef7 protein_coding protein_coding MGP_LPJ_T0087885.1 MGP_LPJ_G0033273.1 mouse_genomes_project 8 8987990 8991973 + Arhgef7 protein_coding processed_transcript MGP_LPJ_T0087886.1 MGP_LPJ_G0033273.1 mouse_genomes_project 8 9005871 9007925 + Arhgef7 protein_coding processed_transcript MGP_LPJ_T0010970.1 MGP_LPJ_G0009088.1 mouse_genomes_project 8 10429510 10429578 - Mir1968 miRNA miRNA MGP_LPJ_T0009195.1 MGP_LPJ_G0007387.1 mouse_genomes_project 8 113745694 113829673 - Gm26816 lincRNA lincRNA MGP_LPJ_T0087711.1 MGP_LPJ_G0033218.1 mouse_genomes_project 8 363108 380323 - MGP_LPJ_P0087711 Pex11g protein_coding protein_coding MGP_LPJ_T0087712.1 MGP_LPJ_G0033218.1 mouse_genomes_project 8 363111 380288 - MGP_LPJ_P0087712 Pex11g protein_coding protein_coding MGP_LPJ_T0087713.1 MGP_LPJ_G0033218.1 mouse_genomes_project 8 370160 380313 - MGP_LPJ_P0087713 Pex11g protein_coding protein_coding MGP_LPJ_T0089364.1 MGP_LPJ_G0033747.1 mouse_genomes_project 8 84669674 84687797 - MGP_LPJ_P0089364 Adgre5 protein_coding protein_coding MGP_LPJ_T0089365.1 MGP_LPJ_G0033747.1 mouse_genomes_project 8 84669785 84687640 - MGP_LPJ_P0089365 Adgre5 protein_coding protein_coding MGP_LPJ_T0089366.1 MGP_LPJ_G0033747.1 mouse_genomes_project 8 84669787 84687644 - MGP_LPJ_P0089366 Adgre5 protein_coding protein_coding MGP_LPJ_T0089367.1 MGP_LPJ_G0033747.1 mouse_genomes_project 8 84670241 84671254 - Adgre5 protein_coding retained_intron MGP_LPJ_T0089368.1 MGP_LPJ_G0033747.1 mouse_genomes_project 8 84671671 84674753 - Adgre5 protein_coding retained_intron MGP_LPJ_T0089369.1 MGP_LPJ_G0033747.1 mouse_genomes_project 8 84673996 84674779 - Adgre5 protein_coding retained_intron MGP_LPJ_T0089370.1 MGP_LPJ_G0033747.1 mouse_genomes_project 8 84679989 84687654 - MGP_LPJ_P0089370 Adgre5 protein_coding nonsense_mediated_decay MGP_LPJ_T0088906.1 MGP_LPJ_G0033604.1 mouse_genomes_project 8 70507901 70520918 - MGP_LPJ_P0088906 Armc6 protein_coding protein_coding MGP_LPJ_T0088907.1 MGP_LPJ_G0033604.1 mouse_genomes_project 8 70507927 70510541 - Armc6 protein_coding retained_intron MGP_LPJ_T0088908.1 MGP_LPJ_G0033604.1 mouse_genomes_project 8 70508206 70510013 - Armc6 protein_coding retained_intron MGP_LPJ_T0088909.1 MGP_LPJ_G0033604.1 mouse_genomes_project 8 70510937 70512929 - Armc6 protein_coding retained_intron MGP_LPJ_T0088910.1 MGP_LPJ_G0033604.1 mouse_genomes_project 8 70512361 70520901 - Armc6 protein_coding retained_intron MGP_LPJ_T0088911.1 MGP_LPJ_G0033604.1 mouse_genomes_project 8 70513069 70520572 - MGP_LPJ_P0088911 Armc6 protein_coding protein_coding MGP_LPJ_T0002350.1 MGP_LPJ_G0002258.1 mouse_genomes_project 8 1428598 1428812 - TEC TEC MGP_LPJ_T0090690.1 MGP_LPJ_G0034168.1 mouse_genomes_project 8 127759344 127790747 - MGP_LPJ_P0090690 Abcb10 protein_coding protein_coding MGP_LPJ_T0089821.1 MGP_LPJ_G0033879.1 mouse_genomes_project 8 96444360 96451233 + MGP_LPJ_P0089821 Polr2c protein_coding protein_coding MGP_LPJ_T0089822.1 MGP_LPJ_G0033879.1 mouse_genomes_project 8 96444466 96451170 + MGP_LPJ_P0089822 Polr2c protein_coding unknown_likely_coding MGP_LPJ_T0089738.1 MGP_LPJ_G0033855.1 mouse_genomes_project 8 95010852 95051078 - MGP_LPJ_P0089738 Ces5a protein_coding protein_coding MGP_LPJ_T0005379.1 MGP_LPJ_G0004559.1 mouse_genomes_project 8 45249697 45253181 + Gm15634 antisense antisense MGP_LPJ_T0088266.1 MGP_LPJ_G0033402.1 mouse_genomes_project 8 24036982 24051913 - MGP_LPJ_P0088266 Pomk protein_coding protein_coding MGP_LPJ_T0090490.1 MGP_LPJ_G0034115.1 mouse_genomes_project 8 125187098 125218747 - MGP_LPJ_P0090490 Fbxo31 protein_coding protein_coding MGP_LPJ_T0090491.1 MGP_LPJ_G0034115.1 mouse_genomes_project 8 125191659 125199082 - Fbxo31 protein_coding processed_transcript MGP_LPJ_T0090492.1 MGP_LPJ_G0034115.1 mouse_genomes_project 8 125193283 125199945 - Fbxo31 protein_coding retained_intron MGP_LPJ_T0090493.1 MGP_LPJ_G0034115.1 mouse_genomes_project 8 125204312 125218731 - MGP_LPJ_P0090493 Fbxo31 protein_coding protein_coding MGP_LPJ_T0098324.1 MGP_LPJ_G0036605.1 mouse_genomes_project 8 118199456 118199556 - Gm22556 rRNA rRNA MGP_LPJ_T0088378.1 MGP_LPJ_G0033448.1 mouse_genomes_project 8 34156073 34252493 + MGP_LPJ_P0088378 Mfhas1 protein_coding protein_coding MGP_LPJ_T0088379.1 MGP_LPJ_G0033448.1 mouse_genomes_project 8 34178732 34249818 + Mfhas1 protein_coding processed_transcript MGP_LPJ_T0088077.1 MGP_LPJ_G0033334.1 mouse_genomes_project 8 17059424 17062102 + MGP_LPJ_P0088077 Defb7 protein_coding protein_coding MGP_LPJ_T0088054.1 MGP_LPJ_G0033318.1 mouse_genomes_project 8 16178542 16233763 - MGP_LPJ_P0088054 Angpt2 protein_coding protein_coding MGP_LPJ_T0088055.1 MGP_LPJ_G0033318.1 mouse_genomes_project 8 16180370 16188445 - Angpt2 protein_coding processed_transcript MGP_LPJ_T0011016.1 MGP_LPJ_G0009134.1 mouse_genomes_project 8 89309434 89309502 + Mir7071 miRNA miRNA MGP_LPJ_T0088172.1 MGP_LPJ_G0033379.1 mouse_genomes_project 8 22517917 22541688 - Ido2 protein_coding processed_transcript MGP_LPJ_T0088173.1 MGP_LPJ_G0033379.1 mouse_genomes_project 8 22518477 22569786 - MGP_LPJ_P0088173 Ido2 protein_coding protein_coding MGP_LPJ_T0088174.1 MGP_LPJ_G0033379.1 mouse_genomes_project 8 22519477 22526816 - Ido2 protein_coding retained_intron MGP_LPJ_T0088175.1 MGP_LPJ_G0033379.1 mouse_genomes_project 8 22537848 22541645 - Ido2 protein_coding processed_transcript MGP_LPJ_T0089906.1 MGP_LPJ_G0033912.1 mouse_genomes_project 8 106637788 106648426 + MGP_LPJ_P0089906 Cmtm2b protein_coding protein_coding MGP_LPJ_T0011019.1 MGP_LPJ_G0009137.1 mouse_genomes_project 8 95889610 95889681 + Mir138-2 miRNA miRNA MGP_LPJ_T0009206.1 MGP_LPJ_G0007396.1 mouse_genomes_project 8 124809029 124812168 - lincRNA lincRNA MGP_LPJ_T0015901.1 MGP_LPJ_G0013992.1 mouse_genomes_project 8 10323620 10324545 + processed_pseudogene processed_pseudogene MGP_LPJ_T0087997.1 MGP_LPJ_G0033303.1 mouse_genomes_project 8 11221900 11227374 - MGP_LPJ_P0087997 Coprs protein_coding protein_coding MGP_LPJ_T0015945.1 MGP_LPJ_G0014036.1 mouse_genomes_project 8 80303942 80304917 - processed_pseudogene processed_pseudogene MGP_LPJ_T0088300.1 MGP_LPJ_G0033416.1 mouse_genomes_project 8 25517016 25521760 + MGP_LPJ_P0088300 Tex24 protein_coding protein_coding MGP_LPJ_T0009202.1 MGP_LPJ_G0007394.1 mouse_genomes_project 8 124594203 124594467 + Gm28324 lincRNA lincRNA MGP_LPJ_T0089929.1 MGP_LPJ_G0033921.1 mouse_genomes_project 8 106977520 106980776 - MGP_LPJ_P0089929 Rrad protein_coding protein_coding MGP_LPJ_T0088328.1 MGP_LPJ_G0033431.1 mouse_genomes_project 8 31839226 31840068 + MGP_LPJ_P0088328 5930422O12Rik protein_coding protein_coding MGP_LPJ_T0090715.1 MGP_LPJ_G0034177.1 mouse_genomes_project 8 128539040 128590339 - MGP_LPJ_P0090715 Ttc13 protein_coding unknown_likely_coding MGP_LPJ_T0090716.1 MGP_LPJ_G0034177.1 mouse_genomes_project 8 128539050 128590360 - MGP_LPJ_P0090716 Ttc13 protein_coding protein_coding MGP_LPJ_T0090717.1 MGP_LPJ_G0034177.1 mouse_genomes_project 8 128539050 128590341 - MGP_LPJ_P0090717 Ttc13 protein_coding protein_coding MGP_LPJ_T0090718.1 MGP_LPJ_G0034177.1 mouse_genomes_project 8 128539050 128590349 - MGP_LPJ_P0090718 Ttc13 protein_coding protein_coding MGP_LPJ_T0090719.1 MGP_LPJ_G0034177.1 mouse_genomes_project 8 128541163 128541934 - Ttc13 protein_coding retained_intron MGP_LPJ_T0090720.1 MGP_LPJ_G0034177.1 mouse_genomes_project 8 128541669 128543195 - Ttc13 protein_coding retained_intron MGP_LPJ_T0090721.1 MGP_LPJ_G0034177.1 mouse_genomes_project 8 128541813 128546673 - Ttc13 protein_coding retained_intron MGP_LPJ_T0090722.1 MGP_LPJ_G0034177.1 mouse_genomes_project 8 128546759 128550251 - Ttc13 protein_coding retained_intron MGP_LPJ_T0090723.1 MGP_LPJ_G0034177.1 mouse_genomes_project 8 128547266 128549843 - Ttc13 protein_coding retained_intron MGP_LPJ_T0090724.1 MGP_LPJ_G0034177.1 mouse_genomes_project 8 128574980 128590358 - Ttc13 protein_coding retained_intron MGP_LPJ_T0102473.1 MGP_LPJ_G0040509.1 mouse_genomes_project 8 101473855 101475244 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0005409.1 MGP_LPJ_G0004584.1 mouse_genomes_project 8 109620445 109621959 - Gm16208 antisense antisense MGP_LPJ_T0009148.1 MGP_LPJ_G0007359.1 mouse_genomes_project 8 88323540 88430926 + Gm27169 lincRNA lincRNA MGP_LPJ_T0087823.1 MGP_LPJ_G0033249.1 mouse_genomes_project 8 1194284 1235235 - MGP_LPJ_P0087823 Elavl1 protein_coding protein_coding MGP_LPJ_T0088607.1 MGP_LPJ_G0033514.1 mouse_genomes_project 8 47451702 47682874 - MGP_LPJ_P0088607 Tenm3 protein_coding protein_coding MGP_LPJ_T0088608.1 MGP_LPJ_G0033514.1 mouse_genomes_project 8 47453718 48109877 - MGP_LPJ_P0088608 Tenm3 protein_coding protein_coding MGP_LPJ_T0088609.1 MGP_LPJ_G0033514.1 mouse_genomes_project 8 47453741 47928122 - MGP_LPJ_P0088609 Tenm3 protein_coding protein_coding MGP_LPJ_T0088610.1 MGP_LPJ_G0033514.1 mouse_genomes_project 8 47506307 47530473 - Tenm3 protein_coding processed_transcript MGP_LPJ_T0088611.1 MGP_LPJ_G0033514.1 mouse_genomes_project 8 47566345 47802175 - MGP_LPJ_P0088611 Tenm3 protein_coding protein_coding MGP_LPJ_T0088612.1 MGP_LPJ_G0033514.1 mouse_genomes_project 8 47630855 47802521 - MGP_LPJ_P0088612 Tenm3 protein_coding protein_coding MGP_LPJ_T0088613.1 MGP_LPJ_G0033514.1 mouse_genomes_project 8 47630855 47802328 - MGP_LPJ_P0088613 Tenm3 protein_coding protein_coding MGP_LPJ_T0101050.1 MGP_LPJ_G0039313.1 mouse_genomes_project 8 92399088 92399220 - Gm22428 snoRNA snoRNA MGP_LPJ_T0089308.1 MGP_LPJ_G0033729.1 mouse_genomes_project 8 82168045 82608964 + MGP_LPJ_P0089308 Inpp4b protein_coding protein_coding MGP_LPJ_T0089309.1 MGP_LPJ_G0033729.1 mouse_genomes_project 8 82168047 82951214 + MGP_LPJ_P0089309 Inpp4b protein_coding protein_coding MGP_LPJ_T0089310.1 MGP_LPJ_G0033729.1 mouse_genomes_project 8 82168051 83013024 + MGP_LPJ_P0089310 Inpp4b protein_coding protein_coding MGP_LPJ_T0089311.1 MGP_LPJ_G0033729.1 mouse_genomes_project 8 82168051 83013256 + MGP_LPJ_P0089311 Inpp4b protein_coding nonsense_mediated_decay MGP_LPJ_T0089312.1 MGP_LPJ_G0033729.1 mouse_genomes_project 8 82168051 83015508 + MGP_LPJ_P0089312 Inpp4b protein_coding protein_coding MGP_LPJ_T0089313.1 MGP_LPJ_G0033729.1 mouse_genomes_project 8 82581726 83013029 + MGP_LPJ_P0089313 Inpp4b protein_coding protein_coding MGP_LPJ_T0089314.1 MGP_LPJ_G0033729.1 mouse_genomes_project 8 82586999 82888540 + MGP_LPJ_P0089314 Inpp4b protein_coding unknown_likely_coding MGP_LPJ_T0089315.1 MGP_LPJ_G0033729.1 mouse_genomes_project 8 82630988 82677232 + Inpp4b protein_coding processed_transcript MGP_LPJ_T0089316.1 MGP_LPJ_G0033729.1 mouse_genomes_project 8 82633867 82756215 + Inpp4b protein_coding processed_transcript MGP_LPJ_T0089317.1 MGP_LPJ_G0033729.1 mouse_genomes_project 8 82637319 82951214 + MGP_LPJ_P0089317 Inpp4b protein_coding protein_coding MGP_LPJ_T0089318.1 MGP_LPJ_G0033729.1 mouse_genomes_project 8 82710013 82823532 + Inpp4b protein_coding processed_transcript MGP_LPJ_T0089319.1 MGP_LPJ_G0033729.1 mouse_genomes_project 8 82726459 83013038 + MGP_LPJ_P0089319 Inpp4b protein_coding protein_coding MGP_LPJ_T0089320.1 MGP_LPJ_G0033729.1 mouse_genomes_project 8 82763376 82775525 + Inpp4b protein_coding processed_transcript MGP_LPJ_T0088162.1 MGP_LPJ_G0033374.1 mouse_genomes_project 8 21140829 21145369 - Golga7 protein_coding retained_intron MGP_LPJ_T0088163.1 MGP_LPJ_G0033374.1 mouse_genomes_project 8 21142672 21156886 - MGP_LPJ_P0088163 Golga7 protein_coding unknown_likely_coding MGP_LPJ_T0089667.1 MGP_LPJ_G0033829.1 mouse_genomes_project 8 89857785 89898288 + MGP_LPJ_P0089667 Nod2 protein_coding protein_coding MGP_LPJ_T0089668.1 MGP_LPJ_G0033829.1 mouse_genomes_project 8 89857785 89898288 + MGP_LPJ_P0089668 Nod2 protein_coding protein_coding MGP_LPJ_T0089669.1 MGP_LPJ_G0033829.1 mouse_genomes_project 8 89857854 89876094 + Nod2 protein_coding retained_intron MGP_LPJ_T0089670.1 MGP_LPJ_G0033829.1 mouse_genomes_project 8 89861856 89898287 + MGP_LPJ_P0089670 Nod2 protein_coding protein_coding MGP_LPJ_T0009174.1 MGP_LPJ_G0007373.1 mouse_genomes_project 8 93740786 93743493 - Gm21817 lincRNA lincRNA MGP_LPJ_T0088375.1 MGP_LPJ_G0033445.1 mouse_genomes_project 8 33349869 33491769 - MGP_LPJ_P0088375 Tnks protein_coding protein_coding MGP_LPJ_T0088067.1 MGP_LPJ_G0033325.1 mouse_genomes_project 8 16652333 16653184 - MGP_LPJ_P0088067 protein_coding protein_coding MGP_LPJ_T0088313.1 MGP_LPJ_G0033422.1 mouse_genomes_project 8 29440978 29463100 + MGP_LPJ_P0088313 Rnf122 protein_coding protein_coding MGP_LPJ_T0088314.1 MGP_LPJ_G0033422.1 mouse_genomes_project 8 29440988 29451565 + Rnf122 protein_coding retained_intron MGP_LPJ_T0088315.1 MGP_LPJ_G0033422.1 mouse_genomes_project 8 29441306 29460302 + MGP_LPJ_P0088315 Rnf122 protein_coding unknown_likely_coding MGP_LPJ_T0098064.1 MGP_LPJ_G0036345.1 mouse_genomes_project 8 96557855 96562943 - pseudogene pseudogene MGP_LPJ_T0101032.1 MGP_LPJ_G0039295.1 mouse_genomes_project 8 60659804 60659912 - Gm23329 snoRNA snoRNA MGP_LPJ_T0090691.1 MGP_LPJ_G0034169.1 mouse_genomes_project 8 127804288 127833322 - MGP_LPJ_P0090691 Taf5l protein_coding protein_coding MGP_LPJ_T0090692.1 MGP_LPJ_G0034169.1 mouse_genomes_project 8 127804288 127830664 - MGP_LPJ_P0090692 Taf5l protein_coding protein_coding MGP_LPJ_T0090132.1 MGP_LPJ_G0034002.1 mouse_genomes_project 8 109759546 109798730 + MGP_LPJ_P0090132 Cyb5b protein_coding unknown_likely_coding MGP_LPJ_T0090133.1 MGP_LPJ_G0034002.1 mouse_genomes_project 8 109759585 109798734 + MGP_LPJ_P0090133 Cyb5b protein_coding protein_coding MGP_LPJ_T0090312.1 MGP_LPJ_G0034060.1 mouse_genomes_project 8 116787258 116949337 - MGP_LPJ_P0090312 Adamts18 protein_coding protein_coding MGP_LPJ_T0088098.1 MGP_LPJ_G0033352.1 mouse_genomes_project 8 19903098 19914014 + MGP_LPJ_P0088098 Alg11 protein_coding protein_coding MGP_LPJ_T0088099.1 MGP_LPJ_G0033352.1 mouse_genomes_project 8 19903099 19914014 + MGP_LPJ_P0088099 Alg11 protein_coding protein_coding MGP_LPJ_T0088100.1 MGP_LPJ_G0033352.1 mouse_genomes_project 8 19903117 19907803 + MGP_LPJ_P0088100 Alg11 protein_coding protein_coding MGP_LPJ_T0088101.1 MGP_LPJ_G0033352.1 mouse_genomes_project 8 19911352 19912224 + Alg11 protein_coding processed_transcript MGP_LPJ_T0099752.1 MGP_LPJ_G0038015.1 mouse_genomes_project 8 10527502 10527605 - Gm25014 snRNA snRNA MGP_LPJ_T0088316.1 MGP_LPJ_G0033423.1 mouse_genomes_project 8 29482765 29498198 + MGP_LPJ_P0088316 Tti2 protein_coding protein_coding MGP_LPJ_T0089109.1 MGP_LPJ_G0033662.1 mouse_genomes_project 8 71943244 71949089 - MGP_LPJ_P0089109 Nxnl1 protein_coding protein_coding MGP_LPJ_T0089110.1 MGP_LPJ_G0033662.1 mouse_genomes_project 8 71943244 71949137 - MGP_LPJ_P0089110 Nxnl1 protein_coding protein_coding MGP_LPJ_T0009101.1 MGP_LPJ_G0007319.1 mouse_genomes_project 8 31296960 31362114 - Gm3985 lincRNA lincRNA MGP_LPJ_T0009102.1 MGP_LPJ_G0007319.1 mouse_genomes_project 8 31298935 31354616 - Gm3985 lincRNA lincRNA MGP_LPJ_T0009087.1 MGP_LPJ_G0007309.1 mouse_genomes_project 8 10442525 10449520 + 2810030D12Rik lincRNA lincRNA MGP_LPJ_T0009088.1 MGP_LPJ_G0007309.1 mouse_genomes_project 8 10442533 10449532 + 2810030D12Rik lincRNA lincRNA MGP_LPJ_T0009089.1 MGP_LPJ_G0007309.1 mouse_genomes_project 8 10442557 10443603 + 2810030D12Rik lincRNA lincRNA MGP_LPJ_T0009090.1 MGP_LPJ_G0007309.1 mouse_genomes_project 8 10442625 10449525 + 2810030D12Rik lincRNA lincRNA MGP_LPJ_T0089083.1 MGP_LPJ_G0033654.1 mouse_genomes_project 8 71837873 71838697 + MGP_LPJ_P0089083 Mrpl34 protein_coding protein_coding MGP_LPJ_T0089995.1 MGP_LPJ_G0033947.1 mouse_genomes_project 8 107827763 107852368 + MGP_LPJ_P0089995 Slc9a5 protein_coding protein_coding MGP_LPJ_T0098060.1 MGP_LPJ_G0036341.1 mouse_genomes_project 8 33491133 33492288 + pseudogene pseudogene MGP_LPJ_T0089598.1 MGP_LPJ_G0033810.1 mouse_genomes_project 8 86595220 86613239 - MGP_LPJ_P0089598 Dnaja2 protein_coding protein_coding MGP_LPJ_T0005428.1 MGP_LPJ_G0004601.1 mouse_genomes_project 8 126392518 126394818 + Gm10612 antisense antisense MGP_LPJ_T0088119.1 MGP_LPJ_G0033362.1 mouse_genomes_project 8 20329204 20418613 + MGP_LPJ_P0088119 Slc20a2 protein_coding protein_coding MGP_LPJ_T0010976.1 MGP_LPJ_G0009094.1 mouse_genomes_project 8 21030927 21031055 + Mir486 miRNA miRNA MGP_LPJ_T0088528.1 MGP_LPJ_G0033490.1 mouse_genomes_project 8 45089784 45092750 - MGP_LPJ_P0088528 Ankrd37 protein_coding protein_coding MGP_LPJ_T0088529.1 MGP_LPJ_G0033490.1 mouse_genomes_project 8 45089793 45092750 - Ankrd37 protein_coding processed_transcript MGP_LPJ_T0088530.1 MGP_LPJ_G0033490.1 mouse_genomes_project 8 45089796 45092449 - Ankrd37 protein_coding retained_intron MGP_LPJ_T0088531.1 MGP_LPJ_G0033490.1 mouse_genomes_project 8 45089847 45090751 - Ankrd37 protein_coding processed_transcript MGP_LPJ_T0088532.1 MGP_LPJ_G0033490.1 mouse_genomes_project 8 45091014 45092732 - Ankrd37 protein_coding retained_intron MGP_LPJ_T0002370.1 MGP_LPJ_G0002277.1 mouse_genomes_project 8 127166416 127167069 - TEC TEC MGP_LPJ_T0009119.1 MGP_LPJ_G0007334.1 mouse_genomes_project 8 60841588 60844060 + B230317F23Rik lincRNA lincRNA MGP_LPJ_T0088670.1 MGP_LPJ_G0033537.1 mouse_genomes_project 8 60357162 60400989 + MGP_LPJ_P0088670 Aadat protein_coding protein_coding MGP_LPJ_T0011038.1 MGP_LPJ_G0009156.1 mouse_genomes_project 8 114644956 114645030 - Mir7076 miRNA miRNA MGP_LPJ_T0090726.1 MGP_LPJ_G0034179.1 mouse_genomes_project 8 128608352 128619877 - MGP_LPJ_P0090726 Fam89a protein_coding protein_coding MGP_LPJ_T0089736.1 MGP_LPJ_G0033853.1 mouse_genomes_project 8 94808194 94843528 - MGP_LPJ_P0089736 Ces1g protein_coding protein_coding MGP_LPJ_T0099788.1 MGP_LPJ_G0038051.1 mouse_genomes_project 8 112633726 112633828 - Gm25321 snRNA snRNA MGP_LPJ_T0088121.1 MGP_LPJ_G0033364.1 mouse_genomes_project 8 20477711 20481189 + MGP_LPJ_P0088121 Dkk4 protein_coding protein_coding MGP_LPJ_T0098312.1 MGP_LPJ_G0036593.1 mouse_genomes_project 8 1972398 1972517 - n-R5s93 rRNA rRNA MGP_LPJ_T0090672.1 MGP_LPJ_G0034160.1 mouse_genomes_project 8 127225119 127253598 + MGP_LPJ_P0090672 Afg3l1 protein_coding protein_coding MGP_LPJ_T0090673.1 MGP_LPJ_G0034160.1 mouse_genomes_project 8 127225119 127253598 + MGP_LPJ_P0090673 Afg3l1 protein_coding nonsense_mediated_decay MGP_LPJ_T0090674.1 MGP_LPJ_G0034160.1 mouse_genomes_project 8 127225156 127229387 + Afg3l1 protein_coding retained_intron MGP_LPJ_T0090675.1 MGP_LPJ_G0034160.1 mouse_genomes_project 8 127228459 127237816 + Afg3l1 protein_coding processed_transcript MGP_LPJ_T0090676.1 MGP_LPJ_G0034160.1 mouse_genomes_project 8 127242648 127248622 + Afg3l1 protein_coding retained_intron MGP_LPJ_T0090677.1 MGP_LPJ_G0034160.1 mouse_genomes_project 8 127250766 127251296 + Afg3l1 protein_coding retained_intron MGP_LPJ_T0089804.1 MGP_LPJ_G0033877.1 mouse_genomes_project 8 96405771 96424924 - MGP_LPJ_P0089804 Ciapin1 protein_coding protein_coding MGP_LPJ_T0089805.1 MGP_LPJ_G0033877.1 mouse_genomes_project 8 96408884 96410146 - Ciapin1 protein_coding retained_intron MGP_LPJ_T0089806.1 MGP_LPJ_G0033877.1 mouse_genomes_project 8 96408970 96412694 - Ciapin1 protein_coding processed_transcript MGP_LPJ_T0089807.1 MGP_LPJ_G0033877.1 mouse_genomes_project 8 96409046 96424633 - MGP_LPJ_P0089807 Ciapin1 protein_coding protein_coding MGP_LPJ_T0089808.1 MGP_LPJ_G0033877.1 mouse_genomes_project 8 96409660 96419520 - MGP_LPJ_P0089808 Ciapin1 protein_coding protein_coding MGP_LPJ_T0089809.1 MGP_LPJ_G0033877.1 mouse_genomes_project 8 96410588 96412692 - Ciapin1 protein_coding retained_intron MGP_LPJ_T0089810.1 MGP_LPJ_G0033877.1 mouse_genomes_project 8 96411171 96418801 - Ciapin1 protein_coding processed_transcript MGP_LPJ_T0089811.1 MGP_LPJ_G0033877.1 mouse_genomes_project 8 96414047 96424831 - MGP_LPJ_P0089811 Ciapin1 protein_coding protein_coding MGP_LPJ_T0089812.1 MGP_LPJ_G0033877.1 mouse_genomes_project 8 96418752 96424827 - Ciapin1 protein_coding processed_transcript MGP_LPJ_T0089813.1 MGP_LPJ_G0033877.1 mouse_genomes_project 8 96419513 96424608 - Ciapin1 protein_coding processed_transcript MGP_LPJ_T0089155.1 MGP_LPJ_G0033674.1 mouse_genomes_project 8 72345014 72384840 + MGP_LPJ_P0089155 protein_coding protein_coding MGP_LPJ_T0011741.1 MGP_LPJ_G0009859.1 mouse_genomes_project 8 108622715 108622975 - Gm27956 misc_RNA misc_RNA MGP_LPJ_T0090345.1 MGP_LPJ_G0034072.1 mouse_genomes_project 8 120235765 120250145 - MGP_LPJ_P0090345 Gcsh protein_coding protein_coding MGP_LPJ_T0090346.1 MGP_LPJ_G0034072.1 mouse_genomes_project 8 120239598 120247976 - Gcsh protein_coding processed_transcript MGP_LPJ_T0099769.1 MGP_LPJ_G0038032.1 mouse_genomes_project 8 65745335 65745442 - Gm23515 snRNA snRNA MGP_LPJ_T0089679.1 MGP_LPJ_G0033834.1 mouse_genomes_project 8 92152886 92390283 + MGP_LPJ_P0089679 Chd9 protein_coding protein_coding MGP_LPJ_T0089680.1 MGP_LPJ_G0033834.1 mouse_genomes_project 8 92152886 92390283 + MGP_LPJ_P0089680 Chd9 protein_coding protein_coding MGP_LPJ_T0015894.1 MGP_LPJ_G0013985.1 mouse_genomes_project 8 977712 978605 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101031.1 MGP_LPJ_G0039294.1 mouse_genomes_project 8 57291441 57291555 + Gm25379 snoRNA snoRNA MGP_LPJ_T0098063.1 MGP_LPJ_G0036344.1 mouse_genomes_project 8 90432803 90433393 - pseudogene pseudogene MGP_LPJ_T0011041.1 MGP_LPJ_G0009159.1 mouse_genomes_project 8 120871490 120871545 - Gm27361 miRNA miRNA MGP_LPJ_T0018415.1 MGP_LPJ_G0015633.1 mouse_genomes_project 8 57033818 57049815 - AV026068 processed_transcript retained_intron MGP_LPJ_T0018416.1 MGP_LPJ_G0015633.1 mouse_genomes_project 8 57033818 57050146 - AV026068 processed_transcript lincRNA MGP_LPJ_T0018417.1 MGP_LPJ_G0015633.1 mouse_genomes_project 8 57033818 57049736 - AV026068 processed_transcript lincRNA MGP_LPJ_T0018418.1 MGP_LPJ_G0015633.1 mouse_genomes_project 8 57033818 57050270 - AV026068 processed_transcript lincRNA MGP_LPJ_T0018419.1 MGP_LPJ_G0015633.1 mouse_genomes_project 8 57033824 57034912 - AV026068 processed_transcript lincRNA MGP_LPJ_T0018420.1 MGP_LPJ_G0015633.1 mouse_genomes_project 8 57034796 57050241 - AV026068 processed_transcript retained_intron MGP_LPJ_T0018421.1 MGP_LPJ_G0015633.1 mouse_genomes_project 8 57036500 57050178 - AV026068 processed_transcript retained_intron MGP_LPJ_T0018422.1 MGP_LPJ_G0015633.1 mouse_genomes_project 8 57043711 57050159 - AV026068 processed_transcript retained_intron MGP_LPJ_T0018427.1 MGP_LPJ_G0015636.1 mouse_genomes_project 8 78259507 78336681 + processed_transcript processed_transcript MGP_LPJ_T0018428.1 MGP_LPJ_G0015636.1 mouse_genomes_project 8 78309387 78434017 + processed_transcript processed_transcript MGP_LPJ_T0018429.1 MGP_LPJ_G0015636.1 mouse_genomes_project 8 78429405 78433249 + processed_transcript processed_transcript MGP_LPJ_T0010986.1 MGP_LPJ_G0009104.1 mouse_genomes_project 8 56281536 56281645 + Gm25992 miRNA miRNA MGP_LPJ_T0089790.1 MGP_LPJ_G0033870.1 mouse_genomes_project 8 96150178 96183183 - MGP_LPJ_P0089790 Fam192a protein_coding protein_coding MGP_LPJ_T0089009.1 MGP_LPJ_G0033629.1 mouse_genomes_project 8 71034466 71038701 + MGP_LPJ_P0089009 Gm3336 protein_coding protein_coding MGP_LPJ_T0002355.1 MGP_LPJ_G0002263.1 mouse_genomes_project 8 43261201 43262029 - TEC TEC MGP_LPJ_T0087860.1 MGP_LPJ_G0033265.1 mouse_genomes_project 8 8316257 8434976 - MGP_LPJ_P0087860 Col4a1 protein_coding protein_coding MGP_LPJ_T0087861.1 MGP_LPJ_G0033265.1 mouse_genomes_project 8 8330236 8334637 - Col4a1 protein_coding processed_transcript MGP_LPJ_T0011725.1 MGP_LPJ_G0009843.1 mouse_genomes_project 8 4474991 4475193 + Gm27545 misc_RNA misc_RNA MGP_LPJ_T0088373.1 MGP_LPJ_G0033443.1 mouse_genomes_project 8 32819258 32819719 + MGP_LPJ_P0088373 protein_coding protein_coding MGP_LPJ_T0089105.1 MGP_LPJ_G0033658.1 mouse_genomes_project 8 71873165 71888396 - MGP_LPJ_P0089105 Plvap protein_coding protein_coding MGP_LPJ_T0101006.1 MGP_LPJ_G0039269.1 mouse_genomes_project 8 3155124 3155268 - Gm24288 snoRNA snoRNA MGP_LPJ_T0090592.1 MGP_LPJ_G0034142.1 mouse_genomes_project 8 126580984 126681958 - MGP_LPJ_P0090592 Ankrd11 protein_coding protein_coding MGP_LPJ_T0090593.1 MGP_LPJ_G0034142.1 mouse_genomes_project 8 126581446 126617473 - MGP_LPJ_P0090593 Ankrd11 protein_coding protein_coding MGP_LPJ_T0090594.1 MGP_LPJ_G0034142.1 mouse_genomes_project 8 126581469 126681958 - MGP_LPJ_P0090594 Ankrd11 protein_coding nonsense_mediated_decay MGP_LPJ_T0090595.1 MGP_LPJ_G0034142.1 mouse_genomes_project 8 126594734 126617621 - MGP_LPJ_P0090595 Ankrd11 protein_coding unknown_likely_coding MGP_LPJ_T0090596.1 MGP_LPJ_G0034142.1 mouse_genomes_project 8 126603805 126681938 - Ankrd11 protein_coding retained_intron MGP_LPJ_T0090387.1 MGP_LPJ_G0034088.1 mouse_genomes_project 8 123033373 123048264 - MGP_LPJ_P0090387 Hsdl1 protein_coding protein_coding MGP_LPJ_T0088288.1 MGP_LPJ_G0033410.1 mouse_genomes_project 8 25223527 25263186 + MGP_LPJ_P0088288 Adgra2 protein_coding protein_coding MGP_LPJ_T0088289.1 MGP_LPJ_G0033410.1 mouse_genomes_project 8 25223542 25263187 + MGP_LPJ_P0088289 Adgra2 protein_coding protein_coding MGP_LPJ_T0088290.1 MGP_LPJ_G0033410.1 mouse_genomes_project 8 25253933 25258635 + MGP_LPJ_P0088290 Adgra2 protein_coding nonsense_mediated_decay MGP_LPJ_T0088291.1 MGP_LPJ_G0033410.1 mouse_genomes_project 8 25257169 25261374 + MGP_LPJ_P0088291 Adgra2 protein_coding protein_coding MGP_LPJ_T0089192.1 MGP_LPJ_G0033687.1 mouse_genomes_project 8 72912140 72998973 - MGP_LPJ_P0089192 Eps15l1 protein_coding protein_coding MGP_LPJ_T0015913.1 MGP_LPJ_G0014004.1 mouse_genomes_project 8 19625636 19626057 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099761.1 MGP_LPJ_G0038024.1 mouse_genomes_project 8 44951028 44951154 - Gm25309 snRNA snRNA MGP_LPJ_T0015950.1 MGP_LPJ_G0014041.1 mouse_genomes_project 8 82654778 82655129 - processed_pseudogene processed_pseudogene MGP_LPJ_T0090759.1 MGP_LPJ_G0034191.1 mouse_genomes_project 8 129686363 129836957 - MGP_LPJ_P0090759 Pcnx2 protein_coding protein_coding MGP_LPJ_T0090760.1 MGP_LPJ_G0034191.1 mouse_genomes_project 8 129686364 129778789 - Pcnx2 protein_coding retained_intron MGP_LPJ_T0090761.1 MGP_LPJ_G0034191.1 mouse_genomes_project 8 129686366 129708845 - Pcnx2 protein_coding retained_intron MGP_LPJ_T0090762.1 MGP_LPJ_G0034191.1 mouse_genomes_project 8 129766274 129768145 - Pcnx2 protein_coding retained_intron MGP_LPJ_T0090763.1 MGP_LPJ_G0034191.1 mouse_genomes_project 8 129776545 129836957 - MGP_LPJ_P0090763 Pcnx2 protein_coding protein_coding MGP_LPJ_T0090764.1 MGP_LPJ_G0034191.1 mouse_genomes_project 8 129800160 129836915 - Pcnx2 protein_coding processed_transcript MGP_LPJ_T0088085.1 MGP_LPJ_G0033341.1 mouse_genomes_project 8 19631012 19638809 + MGP_LPJ_P0088085 Defb50 protein_coding protein_coding MGP_LPJ_T0009133.1 MGP_LPJ_G0007346.1 mouse_genomes_project 8 81761686 81766924 - Gm27048 lincRNA lincRNA MGP_LPJ_T0090124.1 MGP_LPJ_G0034001.1 mouse_genomes_project 8 109666051 109694996 - MGP_LPJ_P0090124 Terf2 protein_coding protein_coding MGP_LPJ_T0090125.1 MGP_LPJ_G0034001.1 mouse_genomes_project 8 109666053 109694641 - MGP_LPJ_P0090125 Terf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0090126.1 MGP_LPJ_G0034001.1 mouse_genomes_project 8 109666053 109694996 - MGP_LPJ_P0090126 Terf2 protein_coding protein_coding MGP_LPJ_T0090127.1 MGP_LPJ_G0034001.1 mouse_genomes_project 8 109666579 109694965 - MGP_LPJ_P0090127 Terf2 protein_coding protein_coding MGP_LPJ_T0090128.1 MGP_LPJ_G0034001.1 mouse_genomes_project 8 109672168 109694998 - MGP_LPJ_P0090128 Terf2 protein_coding protein_coding MGP_LPJ_T0090129.1 MGP_LPJ_G0034001.1 mouse_genomes_project 8 109672970 109676527 - Terf2 protein_coding retained_intron MGP_LPJ_T0090130.1 MGP_LPJ_G0034001.1 mouse_genomes_project 8 109676079 109678038 - Terf2 protein_coding retained_intron MGP_LPJ_T0090131.1 MGP_LPJ_G0034001.1 mouse_genomes_project 8 109676088 109679814 - Terf2 protein_coding retained_intron MGP_LPJ_T0089779.1 MGP_LPJ_G0033868.1 mouse_genomes_project 8 96037925 96096512 + MGP_LPJ_P0089779 Nlrc5 protein_coding protein_coding MGP_LPJ_T0089780.1 MGP_LPJ_G0033868.1 mouse_genomes_project 8 96043894 96075310 + Nlrc5 protein_coding retained_intron MGP_LPJ_T0089781.1 MGP_LPJ_G0033868.1 mouse_genomes_project 8 96049869 96059435 + MGP_LPJ_P0089781 Nlrc5 protein_coding nonsense_mediated_decay MGP_LPJ_T0089782.1 MGP_LPJ_G0033868.1 mouse_genomes_project 8 96091030 96093109 + Nlrc5 protein_coding retained_intron MGP_LPJ_T0089783.1 MGP_LPJ_G0033868.1 mouse_genomes_project 8 96095503 96097705 + Nlrc5 protein_coding retained_intron MGP_LPJ_T0089784.1 MGP_LPJ_G0033868.1 mouse_genomes_project 8 96095503 96097701 + MGP_LPJ_P0089784 Nlrc5 protein_coding protein_coding MGP_LPJ_T0089547.1 MGP_LPJ_G0033795.1 mouse_genomes_project 8 86074171 86077612 + MGP_LPJ_P0089547 2310036O22Rik protein_coding protein_coding MGP_LPJ_T0089428.1 MGP_LPJ_G0033770.1 mouse_genomes_project 8 85395808 85527989 + Cacna1a protein_coding retained_intron MGP_LPJ_T0089429.1 MGP_LPJ_G0033770.1 mouse_genomes_project 8 85423516 85662689 + MGP_LPJ_P0089429 Cacna1a protein_coding protein_coding MGP_LPJ_T0089430.1 MGP_LPJ_G0033770.1 mouse_genomes_project 8 85423529 85662505 + MGP_LPJ_P0089430 Cacna1a protein_coding protein_coding MGP_LPJ_T0089431.1 MGP_LPJ_G0033770.1 mouse_genomes_project 8 85555914 85562840 + Cacna1a protein_coding processed_transcript MGP_LPJ_T0089432.1 MGP_LPJ_G0033770.1 mouse_genomes_project 8 85582386 85591043 + Cacna1a protein_coding retained_intron MGP_LPJ_T0089433.1 MGP_LPJ_G0033770.1 mouse_genomes_project 8 85611946 85623808 + Cacna1a protein_coding retained_intron MGP_LPJ_T0089434.1 MGP_LPJ_G0033770.1 mouse_genomes_project 8 85611959 85624770 + Cacna1a protein_coding retained_intron MGP_LPJ_T0089435.1 MGP_LPJ_G0033770.1 mouse_genomes_project 8 85611985 85655131 + Cacna1a protein_coding retained_intron MGP_LPJ_T0089436.1 MGP_LPJ_G0033770.1 mouse_genomes_project 8 85612488 85630281 + Cacna1a protein_coding processed_transcript MGP_LPJ_T0090231.1 MGP_LPJ_G0034035.1 mouse_genomes_project 8 113867577 113897845 - MGP_LPJ_P0090231 Ddx19a protein_coding protein_coding MGP_LPJ_T0090232.1 MGP_LPJ_G0034035.1 mouse_genomes_project 8 113871434 113875845 - Ddx19a protein_coding retained_intron MGP_LPJ_T0090233.1 MGP_LPJ_G0034035.1 mouse_genomes_project 8 113875683 113897815 - Ddx19a protein_coding retained_intron MGP_LPJ_T0098067.1 MGP_LPJ_G0036348.1 mouse_genomes_project 8 124731354 124732444 + pseudogene pseudogene MGP_LPJ_T0015900.1 MGP_LPJ_G0013991.1 mouse_genomes_project 8 10257387 10257657 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011017.1 MGP_LPJ_G0009135.1 mouse_genomes_project 8 90262500 90262635 + Mir8110 miRNA miRNA MGP_LPJ_T0089437.1 MGP_LPJ_G0033771.1 mouse_genomes_project 8 85682949 85684469 - MGP_LPJ_P0089437 Ier2 protein_coding protein_coding MGP_LPJ_T0089626.1 MGP_LPJ_G0033817.1 mouse_genomes_project 8 87847550 87848455 + MGP_LPJ_P0089626 Gm10638 protein_coding protein_coding MGP_LPJ_T0018405.1 MGP_LPJ_G0015629.1 mouse_genomes_project 8 40089280 40092275 + Gm16348 processed_transcript processed_transcript MGP_LPJ_T0018406.1 MGP_LPJ_G0015629.1 mouse_genomes_project 8 40089281 40091907 + Gm16348 processed_transcript processed_transcript MGP_LPJ_T0010964.1 MGP_LPJ_G0009082.1 mouse_genomes_project 8 5672967 5673037 - Mir7654 miRNA miRNA MGP_LPJ_T0087855.1 MGP_LPJ_G0033262.1 mouse_genomes_project 8 7062107 7093171 + MGP_LPJ_P0087855 Tnfsf13b protein_coding protein_coding MGP_LPJ_T0087856.1 MGP_LPJ_G0033262.1 mouse_genomes_project 8 7062299 7093171 + MGP_LPJ_P0087856 Tnfsf13b protein_coding unknown_likely_coding MGP_LPJ_T0098322.1 MGP_LPJ_G0036603.1 mouse_genomes_project 8 72686116 72686203 + Gm24747 rRNA rRNA MGP_LPJ_T0090541.1 MGP_LPJ_G0034125.1 mouse_genomes_project 8 126040906 126081647 + MGP_LPJ_P0090541 Zc3h18 protein_coding protein_coding MGP_LPJ_T0090542.1 MGP_LPJ_G0034125.1 mouse_genomes_project 8 126040940 126081648 + MGP_LPJ_P0090542 Zc3h18 protein_coding protein_coding MGP_LPJ_T0090543.1 MGP_LPJ_G0034125.1 mouse_genomes_project 8 126040941 126048029 + MGP_LPJ_P0090543 Zc3h18 protein_coding protein_coding MGP_LPJ_T0090544.1 MGP_LPJ_G0034125.1 mouse_genomes_project 8 126040945 126054047 + Zc3h18 protein_coding retained_intron MGP_LPJ_T0090545.1 MGP_LPJ_G0034125.1 mouse_genomes_project 8 126040978 126081647 + MGP_LPJ_P0090545 Zc3h18 protein_coding protein_coding MGP_LPJ_T0090546.1 MGP_LPJ_G0034125.1 mouse_genomes_project 8 126067553 126070415 + Zc3h18 protein_coding processed_transcript MGP_LPJ_T0090547.1 MGP_LPJ_G0034125.1 mouse_genomes_project 8 126067623 126075691 + MGP_LPJ_P0090547 Zc3h18 protein_coding protein_coding MGP_LPJ_T0090548.1 MGP_LPJ_G0034125.1 mouse_genomes_project 8 126072130 126081647 + Zc3h18 protein_coding retained_intron MGP_LPJ_T0090549.1 MGP_LPJ_G0034125.1 mouse_genomes_project 8 126072305 126075192 + Zc3h18 protein_coding retained_intron MGP_LPJ_T0090550.1 MGP_LPJ_G0034125.1 mouse_genomes_project 8 126075612 126080536 + MGP_LPJ_P0090550 Zc3h18 protein_coding protein_coding MGP_LPJ_T0005372.1 MGP_LPJ_G0004553.1 mouse_genomes_project 8 25179803 25180469 - Proscos antisense antisense MGP_LPJ_T0005373.1 MGP_LPJ_G0004553.1 mouse_genomes_project 8 25179808 25180424 - Proscos antisense antisense MGP_LPJ_T0018401.1 MGP_LPJ_G0015627.1 mouse_genomes_project 8 23582713 23591207 - Gm16159 processed_transcript processed_transcript MGP_LPJ_T0018402.1 MGP_LPJ_G0015627.1 mouse_genomes_project 8 23587801 23588684 - Gm16159 processed_transcript processed_transcript MGP_LPJ_T0090054.1 MGP_LPJ_G0033972.1 mouse_genomes_project 8 108471825 108473694 - MGP_LPJ_P0090054 Ctrl protein_coding protein_coding MGP_LPJ_T0090620.1 MGP_LPJ_G0034147.1 mouse_genomes_project 8 126911931 126930554 + MGP_LPJ_P0090620 Dpep1 protein_coding protein_coding MGP_LPJ_T0089158.1 MGP_LPJ_G0033675.1 mouse_genomes_project 8 72410405 72430611 + MGP_LPJ_P0089158 Zfp961 protein_coding protein_coding MGP_LPJ_T0089159.1 MGP_LPJ_G0033675.1 mouse_genomes_project 8 72410415 72430611 + Zfp961 protein_coding processed_transcript MGP_LPJ_T0089160.1 MGP_LPJ_G0033675.1 mouse_genomes_project 8 72410433 72430201 + Zfp961 protein_coding processed_transcript MGP_LPJ_T0089161.1 MGP_LPJ_G0033675.1 mouse_genomes_project 8 72410434 72428559 + Zfp961 protein_coding processed_transcript MGP_LPJ_T0089162.1 MGP_LPJ_G0033675.1 mouse_genomes_project 8 72410437 72428334 + Zfp961 protein_coding processed_transcript MGP_LPJ_T0089163.1 MGP_LPJ_G0033675.1 mouse_genomes_project 8 72410438 72428610 + MGP_LPJ_P0089163 Zfp961 protein_coding protein_coding MGP_LPJ_T0089164.1 MGP_LPJ_G0033675.1 mouse_genomes_project 8 72410444 72428450 + Zfp961 protein_coding processed_transcript MGP_LPJ_T0089165.1 MGP_LPJ_G0033675.1 mouse_genomes_project 8 72410447 72428799 + Zfp961 protein_coding processed_transcript MGP_LPJ_T0089166.1 MGP_LPJ_G0033675.1 mouse_genomes_project 8 72410448 72426525 + Zfp961 protein_coding processed_transcript MGP_LPJ_T0089167.1 MGP_LPJ_G0033675.1 mouse_genomes_project 8 72410448 72429260 + MGP_LPJ_P0089167 Zfp961 protein_coding protein_coding MGP_LPJ_T0089168.1 MGP_LPJ_G0033675.1 mouse_genomes_project 8 72410458 72453862 + Zfp961 protein_coding processed_transcript MGP_LPJ_T0089169.1 MGP_LPJ_G0033675.1 mouse_genomes_project 8 72410458 72431991 + MGP_LPJ_P0089169 Zfp961 protein_coding protein_coding MGP_LPJ_T0089170.1 MGP_LPJ_G0033675.1 mouse_genomes_project 8 72412839 72428457 + Zfp961 protein_coding processed_transcript MGP_LPJ_T0090294.1 MGP_LPJ_G0034053.1 mouse_genomes_project 8 114932690 114945745 + MGP_LPJ_P0090294 Gabarapl2 protein_coding protein_coding MGP_LPJ_T0090295.1 MGP_LPJ_G0034053.1 mouse_genomes_project 8 114932745 114933759 + Gabarapl2 protein_coding retained_intron MGP_LPJ_T0089959.1 MGP_LPJ_G0033934.1 mouse_genomes_project 8 107701635 107729352 + MGP_LPJ_P0089959 D230025D16Rik protein_coding protein_coding MGP_LPJ_T0089960.1 MGP_LPJ_G0033934.1 mouse_genomes_project 8 107701696 107727424 + D230025D16Rik protein_coding retained_intron MGP_LPJ_T0089961.1 MGP_LPJ_G0033934.1 mouse_genomes_project 8 107701696 107729055 + MGP_LPJ_P0089961 D230025D16Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0089962.1 MGP_LPJ_G0033934.1 mouse_genomes_project 8 107701757 107729352 + MGP_LPJ_P0089962 D230025D16Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0089963.1 MGP_LPJ_G0033934.1 mouse_genomes_project 8 107707437 107716522 + MGP_LPJ_P0089963 D230025D16Rik protein_coding protein_coding MGP_LPJ_T0089964.1 MGP_LPJ_G0033934.1 mouse_genomes_project 8 107722791 107728064 + D230025D16Rik protein_coding retained_intron MGP_LPJ_T0088160.1 MGP_LPJ_G0033372.1 mouse_genomes_project 8 21065536 21102765 - MGP_LPJ_P0088160 Gpat4 protein_coding protein_coding MGP_LPJ_T0011031.1 MGP_LPJ_G0009149.1 mouse_genomes_project 8 111670537 111670616 + Mir3108 miRNA miRNA MGP_LPJ_T0089839.1 MGP_LPJ_G0033888.1 mouse_genomes_project 8 96846854 96916627 - MGP_LPJ_P0089839 Cngb1 protein_coding protein_coding MGP_LPJ_T0089840.1 MGP_LPJ_G0033888.1 mouse_genomes_project 8 96848790 96891134 - MGP_LPJ_P0089840 Cngb1 protein_coding protein_coding MGP_LPJ_T0089841.1 MGP_LPJ_G0033888.1 mouse_genomes_project 8 96848796 96891154 - MGP_LPJ_P0089841 Cngb1 protein_coding protein_coding MGP_LPJ_T0089842.1 MGP_LPJ_G0033888.1 mouse_genomes_project 8 96899960 96913879 - Cngb1 protein_coding retained_intron MGP_LPJ_T0089843.1 MGP_LPJ_G0033888.1 mouse_genomes_project 8 96899960 96913879 - Cngb1 protein_coding retained_intron MGP_LPJ_T0089844.1 MGP_LPJ_G0033888.1 mouse_genomes_project 8 96899960 96903086 - Cngb1 protein_coding retained_intron MGP_LPJ_T0089845.1 MGP_LPJ_G0033888.1 mouse_genomes_project 8 96899960 96916627 - MGP_LPJ_P0089845 Cngb1 protein_coding protein_coding MGP_LPJ_T0089846.1 MGP_LPJ_G0033888.1 mouse_genomes_project 8 96899960 96903495 - MGP_LPJ_P0089846 Cngb1 protein_coding protein_coding MGP_LPJ_T0089847.1 MGP_LPJ_G0033888.1 mouse_genomes_project 8 96899963 96916612 - Cngb1 protein_coding retained_intron MGP_LPJ_T0088048.1 MGP_LPJ_G0033317.1 mouse_genomes_project 8 16078927 16296779 + MGP_LPJ_P0088048 Mcph1 protein_coding protein_coding MGP_LPJ_T0088049.1 MGP_LPJ_G0033317.1 mouse_genomes_project 8 16078960 16202991 + MGP_LPJ_P0088049 Mcph1 protein_coding nonsense_mediated_decay MGP_LPJ_T0088050.1 MGP_LPJ_G0033317.1 mouse_genomes_project 8 16079376 16178226 + Mcph1 protein_coding retained_intron MGP_LPJ_T0088051.1 MGP_LPJ_G0033317.1 mouse_genomes_project 8 16079382 16116554 + MGP_LPJ_P0088051 Mcph1 protein_coding protein_coding MGP_LPJ_T0088052.1 MGP_LPJ_G0033317.1 mouse_genomes_project 8 16109217 16115533 + MGP_LPJ_P0088052 Mcph1 protein_coding protein_coding MGP_LPJ_T0088053.1 MGP_LPJ_G0033317.1 mouse_genomes_project 8 16116244 16136365 + MGP_LPJ_P0088053 Mcph1 protein_coding protein_coding MGP_LPJ_T0015959.1 MGP_LPJ_G0014050.1 mouse_genomes_project 8 97198205 97199431 + processed_pseudogene processed_pseudogene MGP_LPJ_T0090175.1 MGP_LPJ_G0034014.1 mouse_genomes_project 8 112454363 112481386 - MGP_LPJ_P0090175 Ist1 protein_coding protein_coding MGP_LPJ_T0005395.1 MGP_LPJ_G0004573.1 mouse_genomes_project 8 78153607 78156298 + 0610038B21Rik antisense antisense MGP_LPJ_T0005396.1 MGP_LPJ_G0004573.1 mouse_genomes_project 8 78155833 78161566 + 0610038B21Rik antisense antisense MGP_LPJ_T0018424.1 MGP_LPJ_G0015635.1 mouse_genomes_project 8 77186021 77499147 - processed_transcript processed_transcript MGP_LPJ_T0018425.1 MGP_LPJ_G0015635.1 mouse_genomes_project 8 77337869 77499335 - processed_transcript processed_transcript MGP_LPJ_T0018426.1 MGP_LPJ_G0015635.1 mouse_genomes_project 8 77442605 77499783 - processed_transcript retained_intron MGP_LPJ_T0015935.1 MGP_LPJ_G0014026.1 mouse_genomes_project 8 66710474 66710771 - processed_pseudogene processed_pseudogene MGP_LPJ_T0089927.1 MGP_LPJ_G0033919.1 mouse_genomes_project 8 106930942 106936305 + MGP_LPJ_P0089927 Pdp2 protein_coding protein_coding MGP_LPJ_T0015925.1 MGP_LPJ_G0014016.1 mouse_genomes_project 8 36529726 36530742 - processed_pseudogene processed_pseudogene MGP_LPJ_T0088435.1 MGP_LPJ_G0033465.1 mouse_genomes_project 8 39509261 39516267 + MGP_LPJ_P0088435 Adam24 protein_coding protein_coding MGP_LPJ_T0088335.1 MGP_LPJ_G0033435.1 mouse_genomes_project 8 32066238 32092314 + Gsr protein_coding processed_transcript MGP_LPJ_T0088336.1 MGP_LPJ_G0033435.1 mouse_genomes_project 8 32069778 32119587 + MGP_LPJ_P0088336 Gsr protein_coding protein_coding MGP_LPJ_T0088337.1 MGP_LPJ_G0033435.1 mouse_genomes_project 8 32087315 32107072 + Gsr protein_coding processed_transcript MGP_LPJ_T0087904.1 MGP_LPJ_G0033280.1 mouse_genomes_project 8 9985144 10098042 + MGP_LPJ_P0087904 Atp11a protein_coding protein_coding MGP_LPJ_T0087905.1 MGP_LPJ_G0033280.1 mouse_genomes_project 8 9985146 10098042 + MGP_LPJ_P0087905 Atp11a protein_coding protein_coding MGP_LPJ_T0087906.1 MGP_LPJ_G0033280.1 mouse_genomes_project 8 9985199 10088952 + MGP_LPJ_P0087906 Atp11a protein_coding nonsense_mediated_decay MGP_LPJ_T0087907.1 MGP_LPJ_G0033280.1 mouse_genomes_project 8 10039853 10042809 + Atp11a protein_coding retained_intron MGP_LPJ_T0087908.1 MGP_LPJ_G0033280.1 mouse_genomes_project 8 10050793 10056923 + Atp11a protein_coding retained_intron MGP_LPJ_T0087909.1 MGP_LPJ_G0033280.1 mouse_genomes_project 8 10063536 10097981 + MGP_LPJ_P0087909 Atp11a protein_coding protein_coding MGP_LPJ_T0087910.1 MGP_LPJ_G0033280.1 mouse_genomes_project 8 10076359 10086517 + MGP_LPJ_P0087910 Atp11a protein_coding protein_coding MGP_LPJ_T0087911.1 MGP_LPJ_G0033280.1 mouse_genomes_project 8 10078325 10080229 + Atp11a protein_coding processed_transcript MGP_LPJ_T0087912.1 MGP_LPJ_G0033280.1 mouse_genomes_project 8 10086203 10091438 + MGP_LPJ_P0087912 Atp11a protein_coding protein_coding MGP_LPJ_T0087913.1 MGP_LPJ_G0033280.1 mouse_genomes_project 8 10087195 10091435 + MGP_LPJ_P0087913 Atp11a protein_coding protein_coding MGP_LPJ_T0087914.1 MGP_LPJ_G0033280.1 mouse_genomes_project 8 10090797 10094803 + Atp11a protein_coding retained_intron MGP_LPJ_T0089340.1 MGP_LPJ_G0033740.1 mouse_genomes_project 8 84507323 84514971 + MGP_LPJ_P0089340 Ndufb7 protein_coding protein_coding MGP_LPJ_T0089341.1 MGP_LPJ_G0033740.1 mouse_genomes_project 8 84507410 84514971 + Ndufb7 protein_coding retained_intron MGP_LPJ_T0009117.1 MGP_LPJ_G0007332.1 mouse_genomes_project 8 57062658 57071165 + lincRNA lincRNA MGP_LPJ_T0090435.1 MGP_LPJ_G0034103.1 mouse_genomes_project 8 123760245 124106607 + MGP_LPJ_P0090435 Gse1 protein_coding protein_coding MGP_LPJ_T0090436.1 MGP_LPJ_G0034103.1 mouse_genomes_project 8 124035445 124134396 + MGP_LPJ_P0090436 Gse1 protein_coding protein_coding MGP_LPJ_T0090437.1 MGP_LPJ_G0034103.1 mouse_genomes_project 8 124088835 124132486 + MGP_LPJ_P0090437 Gse1 protein_coding protein_coding MGP_LPJ_T0090438.1 MGP_LPJ_G0034103.1 mouse_genomes_project 8 124090407 124132332 + MGP_LPJ_P0090438 Gse1 protein_coding protein_coding MGP_LPJ_T0090439.1 MGP_LPJ_G0034103.1 mouse_genomes_project 8 124124252 124126278 + Gse1 protein_coding retained_intron MGP_LPJ_T0090440.1 MGP_LPJ_G0034103.1 mouse_genomes_project 8 124124300 124128216 + Gse1 protein_coding processed_transcript MGP_LPJ_T0088204.1 MGP_LPJ_G0033386.1 mouse_genomes_project 8 23006537 23011947 + MGP_LPJ_P0088204 Tm2d2 protein_coding protein_coding MGP_LPJ_T0089154.1 MGP_LPJ_G0033673.1 mouse_genomes_project 8 72344987 72352594 + MGP_LPJ_P0089154 Zfp882 protein_coding protein_coding MGP_LPJ_T0089156.1 MGP_LPJ_G0033673.1 mouse_genomes_project 8 72345036 72349946 + MGP_LPJ_P0089156 Zfp882 protein_coding protein_coding MGP_LPJ_T0089157.1 MGP_LPJ_G0033673.1 mouse_genomes_project 8 72345284 72349950 + MGP_LPJ_P0089157 Zfp882 protein_coding protein_coding MGP_LPJ_T0011724.1 MGP_LPJ_G0009842.1 mouse_genomes_project 8 4471071 4471270 + Gm27585 misc_RNA misc_RNA MGP_LPJ_T0009159.1 MGP_LPJ_G0007364.1 mouse_genomes_project 8 88617469 88637172 - Gm27016 lincRNA lincRNA MGP_LPJ_T0088651.1 MGP_LPJ_G0033529.1 mouse_genomes_project 8 57050393 57054981 + MGP_LPJ_P0088651 Hand2 protein_coding protein_coding MGP_LPJ_T0087893.1 MGP_LPJ_G0033277.1 mouse_genomes_project 8 9770494 9790479 - MGP_LPJ_P0087893 protein_coding protein_coding MGP_LPJ_T0011032.1 MGP_LPJ_G0009150.1 mouse_genomes_project 8 113359622 113359682 + miRNA miRNA MGP_LPJ_T0101038.1 MGP_LPJ_G0039301.1 mouse_genomes_project 8 67435937 67436087 - Gm24677 snoRNA snoRNA MGP_LPJ_T0089944.1 MGP_LPJ_G0033927.1 mouse_genomes_project 8 107359809 107370903 + MGP_LPJ_P0089944 Ces2f protein_coding protein_coding MGP_LPJ_T0005433.1 MGP_LPJ_G0004606.1 mouse_genomes_project 8 129836553 129849800 + A730098A19Rik antisense antisense MGP_LPJ_T0088164.1 MGP_LPJ_G0033375.1 mouse_genomes_project 8 21323137 21361990 + MGP_LPJ_P0088164 Sfrp1 protein_coding protein_coding MGP_LPJ_T0088023.1 MGP_LPJ_G0033312.1 mouse_genomes_project 8 12306467 12404052 + MGP_LPJ_P0088023 Arhgef10 protein_coding protein_coding MGP_LPJ_T0088024.1 MGP_LPJ_G0033312.1 mouse_genomes_project 8 12306520 12324726 + Arhgef10 protein_coding retained_intron MGP_LPJ_T0088025.1 MGP_LPJ_G0033312.1 mouse_genomes_project 8 12306527 12361299 + MGP_LPJ_P0088025 Arhgef10 protein_coding protein_coding MGP_LPJ_T0088026.1 MGP_LPJ_G0033312.1 mouse_genomes_project 8 12306541 12404052 + MGP_LPJ_P0088026 Arhgef10 protein_coding protein_coding MGP_LPJ_T0088027.1 MGP_LPJ_G0033312.1 mouse_genomes_project 8 12341898 12404049 + MGP_LPJ_P0088027 Arhgef10 protein_coding protein_coding MGP_LPJ_T0088028.1 MGP_LPJ_G0033312.1 mouse_genomes_project 8 12392151 12392917 + Arhgef10 protein_coding processed_transcript MGP_LPJ_T0088029.1 MGP_LPJ_G0033312.1 mouse_genomes_project 8 12398076 12404041 + Arhgef10 protein_coding processed_transcript MGP_LPJ_T0088074.1 MGP_LPJ_G0033331.1 mouse_genomes_project 8 16759210 16761935 + MGP_LPJ_P0088074 Defb6 protein_coding protein_coding MGP_LPJ_T0088581.1 MGP_LPJ_G0033504.1 mouse_genomes_project 8 46654542 46700480 - MGP_LPJ_P0088581 Trappc11 protein_coding protein_coding MGP_LPJ_T0088582.1 MGP_LPJ_G0033504.1 mouse_genomes_project 8 46654555 46692104 - Trappc11 protein_coding retained_intron MGP_LPJ_T0088583.1 MGP_LPJ_G0033504.1 mouse_genomes_project 8 46654556 46700483 - Trappc11 protein_coding retained_intron MGP_LPJ_T0088584.1 MGP_LPJ_G0033504.1 mouse_genomes_project 8 46670149 46677254 - MGP_LPJ_P0088584 Trappc11 protein_coding protein_coding MGP_LPJ_T0088585.1 MGP_LPJ_G0033504.1 mouse_genomes_project 8 46691738 46695045 - Trappc11 protein_coding retained_intron MGP_LPJ_T0090164.1 MGP_LPJ_G0034013.1 mouse_genomes_project 8 112369611 112385823 - MGP_LPJ_P0090164 Dhodh protein_coding nonsense_mediated_decay MGP_LPJ_T0090165.1 MGP_LPJ_G0034013.1 mouse_genomes_project 8 112371515 112372320 - Dhodh protein_coding processed_transcript MGP_LPJ_T0090166.1 MGP_LPJ_G0034013.1 mouse_genomes_project 8 112371741 112387963 - MGP_LPJ_P0090166 Dhodh protein_coding protein_coding MGP_LPJ_T0090167.1 MGP_LPJ_G0034013.1 mouse_genomes_project 8 112371745 112388214 - MGP_LPJ_P0090167 Dhodh protein_coding protein_coding MGP_LPJ_T0090168.1 MGP_LPJ_G0034013.1 mouse_genomes_project 8 112372169 112374551 - Dhodh protein_coding retained_intron MGP_LPJ_T0090169.1 MGP_LPJ_G0034013.1 mouse_genomes_project 8 112372241 112373219 - Dhodh protein_coding retained_intron MGP_LPJ_T0090170.1 MGP_LPJ_G0034013.1 mouse_genomes_project 8 112372314 112379678 - Dhodh protein_coding retained_intron MGP_LPJ_T0090171.1 MGP_LPJ_G0034013.1 mouse_genomes_project 8 112374298 112387957 - MGP_LPJ_P0090171 Dhodh protein_coding nonsense_mediated_decay MGP_LPJ_T0090172.1 MGP_LPJ_G0034013.1 mouse_genomes_project 8 112379485 112388011 - Dhodh protein_coding retained_intron MGP_LPJ_T0090173.1 MGP_LPJ_G0034013.1 mouse_genomes_project 8 112379497 112388011 - Dhodh protein_coding retained_intron MGP_LPJ_T0090174.1 MGP_LPJ_G0034013.1 mouse_genomes_project 8 112381469 112388264 - MGP_LPJ_P0090174 Dhodh protein_coding protein_coding MGP_LPJ_T0089671.1 MGP_LPJ_G0033830.1 mouse_genomes_project 8 89910666 89968044 + MGP_LPJ_P0089671 Cyld protein_coding protein_coding MGP_LPJ_T0089672.1 MGP_LPJ_G0033830.1 mouse_genomes_project 8 89918853 89968044 + MGP_LPJ_P0089672 Cyld protein_coding protein_coding MGP_LPJ_T0089673.1 MGP_LPJ_G0033830.1 mouse_genomes_project 8 89918853 89968044 + MGP_LPJ_P0089673 Cyld protein_coding protein_coding MGP_LPJ_T0090178.1 MGP_LPJ_G0034017.1 mouse_genomes_project 8 112562645 112657281 + MGP_LPJ_P0090178 Ap1g1 protein_coding protein_coding MGP_LPJ_T0090179.1 MGP_LPJ_G0034017.1 mouse_genomes_project 8 112562988 112598301 + Ap1g1 protein_coding processed_transcript MGP_LPJ_T0090180.1 MGP_LPJ_G0034017.1 mouse_genomes_project 8 112562997 112654435 + MGP_LPJ_P0090180 Ap1g1 protein_coding protein_coding MGP_LPJ_T0090181.1 MGP_LPJ_G0034017.1 mouse_genomes_project 8 112636256 112642731 + Ap1g1 protein_coding retained_intron MGP_LPJ_T0090182.1 MGP_LPJ_G0034017.1 mouse_genomes_project 8 112651524 112653367 + Ap1g1 protein_coding retained_intron MGP_LPJ_T0090183.1 MGP_LPJ_G0034017.1 mouse_genomes_project 8 112656184 112657280 + MGP_LPJ_P0090183 Ap1g1 protein_coding protein_coding MGP_LPJ_T0010988.1 MGP_LPJ_G0009106.1 mouse_genomes_project 8 65164102 65164186 - Gm23419 miRNA miRNA MGP_LPJ_T0090484.1 MGP_LPJ_G0034112.1 mouse_genomes_project 8 124719585 124722310 + MGP_LPJ_P0090484 Foxc2 protein_coding protein_coding MGP_LPJ_T0088267.1 MGP_LPJ_G0033403.1 mouse_genomes_project 8 24056523 24075418 - MGP_LPJ_P0088267 Fnta protein_coding protein_coding MGP_LPJ_T0011009.1 MGP_LPJ_G0009127.1 mouse_genomes_project 8 85198318 85198401 - Mir3074-2 miRNA miRNA MGP_LPJ_T0090590.1 MGP_LPJ_G0034140.1 mouse_genomes_project 8 126471193 126512891 + MGP_LPJ_P0090590 Acsf3 protein_coding protein_coding MGP_LPJ_T0089282.1 MGP_LPJ_G0033718.1 mouse_genomes_project 8 80018162 80037954 - MGP_LPJ_P0089282 Mmaa protein_coding unknown_likely_coding MGP_LPJ_T0088780.1 MGP_LPJ_G0033569.1 mouse_genomes_project 8 68586353 68967464 - MGP_LPJ_P0088780 Csgalnact1 protein_coding protein_coding MGP_LPJ_T0088781.1 MGP_LPJ_G0033569.1 mouse_genomes_project 8 68587538 68967432 - MGP_LPJ_P0088781 Csgalnact1 protein_coding protein_coding MGP_LPJ_T0088782.1 MGP_LPJ_G0033569.1 mouse_genomes_project 8 68619992 68967420 - MGP_LPJ_P0088782 Csgalnact1 protein_coding protein_coding MGP_LPJ_T0088783.1 MGP_LPJ_G0033569.1 mouse_genomes_project 8 68701423 68967433 - Csgalnact1 protein_coding processed_transcript MGP_LPJ_T0088784.1 MGP_LPJ_G0033569.1 mouse_genomes_project 8 68795462 68967432 - Csgalnact1 protein_coding processed_transcript MGP_LPJ_T0088785.1 MGP_LPJ_G0033569.1 mouse_genomes_project 8 68795561 68967433 - Csgalnact1 protein_coding processed_transcript MGP_LPJ_T0088786.1 MGP_LPJ_G0033569.1 mouse_genomes_project 8 68889781 68967433 - Csgalnact1 protein_coding processed_transcript MGP_LPJ_T0089601.1 MGP_LPJ_G0033812.1 mouse_genomes_project 8 86789814 86925580 - MGP_LPJ_P0089601 Itfg1 protein_coding protein_coding MGP_LPJ_T0090501.1 MGP_LPJ_G0034118.1 mouse_genomes_project 8 125388748 125448507 + Jph3 protein_coding processed_transcript MGP_LPJ_T0090502.1 MGP_LPJ_G0034118.1 mouse_genomes_project 8 125389340 125449708 + MGP_LPJ_P0090502 Jph3 protein_coding protein_coding MGP_LPJ_T0090503.1 MGP_LPJ_G0034118.1 mouse_genomes_project 8 125389344 125453173 + MGP_LPJ_P0090503 Jph3 protein_coding nonsense_mediated_decay MGP_LPJ_T0090504.1 MGP_LPJ_G0034118.1 mouse_genomes_project 8 125412351 125441456 + Jph3 protein_coding retained_intron MGP_LPJ_T0092574.1 MGP_LPJ_G0034846.1 mouse_genomes_project 9 65125535 65174839 + MGP_LPJ_P0092574 Igdcc3 protein_coding protein_coding MGP_LPJ_T0092575.1 MGP_LPJ_G0034846.1 mouse_genomes_project 9 65125796 65174316 + MGP_LPJ_P0092575 Igdcc3 protein_coding unknown_likely_coding MGP_LPJ_T0092538.1 MGP_LPJ_G0034835.1 mouse_genomes_project 9 64173368 64174530 + MGP_LPJ_P0092538 Uchl4 protein_coding protein_coding MGP_LPJ_T0093492.1 MGP_LPJ_G0035048.1 mouse_genomes_project 9 100039931 100065202 + MGP_LPJ_P0093492 Rbp2 protein_coding protein_coding MGP_LPJ_T0093493.1 MGP_LPJ_G0035048.1 mouse_genomes_project 9 100039982 100065071 + MGP_LPJ_P0093493 Rbp2 protein_coding protein_coding MGP_LPJ_T0093494.1 MGP_LPJ_G0035048.1 mouse_genomes_project 9 100044334 100065192 + MGP_LPJ_P0093494 Rbp2 protein_coding protein_coding MGP_LPJ_T0093495.1 MGP_LPJ_G0035048.1 mouse_genomes_project 9 100045494 100052674 + Rbp2 protein_coding processed_transcript MGP_LPJ_T0093651.1 MGP_LPJ_G0035084.1 mouse_genomes_project 9 105002921 105048935 - MGP_LPJ_P0093651 Gm20425 protein_coding protein_coding MGP_LPJ_T0091857.1 MGP_LPJ_G0034630.1 mouse_genomes_project 9 44110922 44129474 - MGP_LPJ_P0091857 Il10ra protein_coding protein_coding MGP_LPJ_T0091858.1 MGP_LPJ_G0034630.1 mouse_genomes_project 9 44110925 44129474 - MGP_LPJ_P0091858 Il10ra protein_coding nonsense_mediated_decay MGP_LPJ_T0091859.1 MGP_LPJ_G0034630.1 mouse_genomes_project 9 44111612 44129471 - MGP_LPJ_P0091859 Il10ra protein_coding protein_coding MGP_LPJ_T0011746.1 MGP_LPJ_G0009864.1 mouse_genomes_project 9 15840912 15841218 + Gm25295 misc_RNA misc_RNA MGP_LPJ_T0091782.1 MGP_LPJ_G0034611.1 mouse_genomes_project 9 43506808 43550108 - MGP_LPJ_P0091782 Phldb1 protein_coding protein_coding MGP_LPJ_T0091783.1 MGP_LPJ_G0034611.1 mouse_genomes_project 9 43506812 43533856 - MGP_LPJ_P0091783 Phldb1 protein_coding protein_coding MGP_LPJ_T0091784.1 MGP_LPJ_G0034611.1 mouse_genomes_project 9 43506812 43557026 - MGP_LPJ_P0091784 Phldb1 protein_coding protein_coding MGP_LPJ_T0091785.1 MGP_LPJ_G0034611.1 mouse_genomes_project 9 43506812 43533881 - MGP_LPJ_P0091785 Phldb1 protein_coding protein_coding MGP_LPJ_T0091786.1 MGP_LPJ_G0034611.1 mouse_genomes_project 9 43506812 43536235 - MGP_LPJ_P0091786 Phldb1 protein_coding protein_coding MGP_LPJ_T0091787.1 MGP_LPJ_G0034611.1 mouse_genomes_project 9 43506812 43550087 - MGP_LPJ_P0091787 Phldb1 protein_coding protein_coding MGP_LPJ_T0091788.1 MGP_LPJ_G0034611.1 mouse_genomes_project 9 43506814 43536992 - MGP_LPJ_P0091788 Phldb1 protein_coding protein_coding MGP_LPJ_T0091789.1 MGP_LPJ_G0034611.1 mouse_genomes_project 9 43506814 43550108 - MGP_LPJ_P0091789 Phldb1 protein_coding protein_coding MGP_LPJ_T0091790.1 MGP_LPJ_G0034611.1 mouse_genomes_project 9 43506814 43522316 - MGP_LPJ_P0091790 Phldb1 protein_coding protein_coding MGP_LPJ_T0091791.1 MGP_LPJ_G0034611.1 mouse_genomes_project 9 43508139 43518413 - Phldb1 protein_coding retained_intron MGP_LPJ_T0091792.1 MGP_LPJ_G0034611.1 mouse_genomes_project 9 43514932 43516991 - Phldb1 protein_coding retained_intron MGP_LPJ_T0091793.1 MGP_LPJ_G0034611.1 mouse_genomes_project 9 43518301 43524692 - MGP_LPJ_P0091793 Phldb1 protein_coding protein_coding MGP_LPJ_T0091794.1 MGP_LPJ_G0034611.1 mouse_genomes_project 9 43521544 43531555 - MGP_LPJ_P0091794 Phldb1 protein_coding protein_coding MGP_LPJ_T0091795.1 MGP_LPJ_G0034611.1 mouse_genomes_project 9 43524154 43529029 - MGP_LPJ_P0091795 Phldb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0091796.1 MGP_LPJ_G0034611.1 mouse_genomes_project 9 43536735 43542017 - MGP_LPJ_P0091796 Phldb1 protein_coding protein_coding MGP_LPJ_T0091797.1 MGP_LPJ_G0034611.1 mouse_genomes_project 9 43536905 43541980 - MGP_LPJ_P0091797 Phldb1 protein_coding protein_coding MGP_LPJ_T0091798.1 MGP_LPJ_G0034611.1 mouse_genomes_project 9 43538931 43549358 - Phldb1 protein_coding retained_intron MGP_LPJ_T0091799.1 MGP_LPJ_G0034611.1 mouse_genomes_project 9 43548017 43548493 - Phldb1 protein_coding processed_transcript MGP_LPJ_T0092809.1 MGP_LPJ_G0034907.1 mouse_genomes_project 9 72190967 72458364 - MGP_LPJ_P0092809 Tcf12 protein_coding protein_coding MGP_LPJ_T0092810.1 MGP_LPJ_G0034907.1 mouse_genomes_project 9 72192523 72245881 - Tcf12 protein_coding retained_intron MGP_LPJ_T0092811.1 MGP_LPJ_G0034907.1 mouse_genomes_project 9 72192539 72458338 - MGP_LPJ_P0092811 Tcf12 protein_coding protein_coding MGP_LPJ_T0092812.1 MGP_LPJ_G0034907.1 mouse_genomes_project 9 72192544 72246189 - MGP_LPJ_P0092812 Tcf12 protein_coding protein_coding MGP_LPJ_T0092813.1 MGP_LPJ_G0034907.1 mouse_genomes_project 9 72192548 72458323 - MGP_LPJ_P0092813 Tcf12 protein_coding nonsense_mediated_decay MGP_LPJ_T0092814.1 MGP_LPJ_G0034907.1 mouse_genomes_project 9 72192994 72458167 - MGP_LPJ_P0092814 Tcf12 protein_coding protein_coding MGP_LPJ_T0092815.1 MGP_LPJ_G0034907.1 mouse_genomes_project 9 72193783 72458388 - MGP_LPJ_P0092815 Tcf12 protein_coding protein_coding MGP_LPJ_T0092816.1 MGP_LPJ_G0034907.1 mouse_genomes_project 9 72198168 72245884 - MGP_LPJ_P0092816 Tcf12 protein_coding protein_coding MGP_LPJ_T0092817.1 MGP_LPJ_G0034907.1 mouse_genomes_project 9 72198171 72458329 - MGP_LPJ_P0092817 Tcf12 protein_coding protein_coding MGP_LPJ_T0092818.1 MGP_LPJ_G0034907.1 mouse_genomes_project 9 72206859 72457718 - MGP_LPJ_P0092818 Tcf12 protein_coding protein_coding MGP_LPJ_T0092819.1 MGP_LPJ_G0034907.1 mouse_genomes_project 9 72217320 72233807 - Tcf12 protein_coding processed_transcript MGP_LPJ_T0092820.1 MGP_LPJ_G0034907.1 mouse_genomes_project 9 72225086 72456288 - MGP_LPJ_P0092820 Tcf12 protein_coding protein_coding MGP_LPJ_T0092821.1 MGP_LPJ_G0034907.1 mouse_genomes_project 9 72225086 72245780 - MGP_LPJ_P0092821 Tcf12 protein_coding nonsense_mediated_decay MGP_LPJ_T0092822.1 MGP_LPJ_G0034907.1 mouse_genomes_project 9 72231827 72345474 - MGP_LPJ_P0092822 Tcf12 protein_coding nonsense_mediated_decay MGP_LPJ_T0092823.1 MGP_LPJ_G0034907.1 mouse_genomes_project 9 72232217 72345472 - MGP_LPJ_P0092823 Tcf12 protein_coding nonsense_mediated_decay MGP_LPJ_T0092824.1 MGP_LPJ_G0034907.1 mouse_genomes_project 9 72232838 72458288 - MGP_LPJ_P0092824 Tcf12 protein_coding protein_coding MGP_LPJ_T0092825.1 MGP_LPJ_G0034907.1 mouse_genomes_project 9 72232859 72458116 - MGP_LPJ_P0092825 Tcf12 protein_coding nonsense_mediated_decay MGP_LPJ_T0092826.1 MGP_LPJ_G0034907.1 mouse_genomes_project 9 72233532 72273350 - MGP_LPJ_P0092826 Tcf12 protein_coding protein_coding MGP_LPJ_T0092827.1 MGP_LPJ_G0034907.1 mouse_genomes_project 9 72234310 72458308 - MGP_LPJ_P0092827 Tcf12 protein_coding nonsense_mediated_decay MGP_LPJ_T0092828.1 MGP_LPJ_G0034907.1 mouse_genomes_project 9 72292865 72458364 - Tcf12 protein_coding retained_intron MGP_LPJ_T0092829.1 MGP_LPJ_G0034907.1 mouse_genomes_project 9 72452703 72457045 - Tcf12 protein_coding retained_intron MGP_LPJ_T0005460.1 MGP_LPJ_G0004626.1 mouse_genomes_project 9 44180718 44184496 - 1700003G13Rik antisense antisense MGP_LPJ_T0005461.1 MGP_LPJ_G0004626.1 mouse_genomes_project 9 44180719 44184517 - 1700003G13Rik antisense antisense MGP_LPJ_T0095047.1 MGP_LPJ_G0035352.1 mouse_genomes_project 9 126146800 126178083 + MGP_LPJ_P0095047 Tcaim protein_coding protein_coding MGP_LPJ_T0095048.1 MGP_LPJ_G0035352.1 mouse_genomes_project 9 126146822 126153109 + Tcaim protein_coding processed_transcript MGP_LPJ_T0095049.1 MGP_LPJ_G0035352.1 mouse_genomes_project 9 126146857 126178076 + MGP_LPJ_P0095049 Tcaim protein_coding nonsense_mediated_decay MGP_LPJ_T0016096.1 MGP_LPJ_G0014187.1 mouse_genomes_project 9 102752298 102752662 + processed_pseudogene processed_pseudogene MGP_LPJ_T0091584.1 MGP_LPJ_G0034520.1 mouse_genomes_project 9 37346212 37347263 - MGP_LPJ_P0091584 Olfr937 protein_coding protein_coding MGP_LPJ_T0016031.1 MGP_LPJ_G0014122.1 mouse_genomes_project 9 77286302 77286678 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005494.1 MGP_LPJ_G0004646.1 mouse_genomes_project 9 69734211 69736781 - Gm16144 antisense antisense MGP_LPJ_T0016103.1 MGP_LPJ_G0014194.1 mouse_genomes_project 9 105174015 105189632 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091692.1 MGP_LPJ_G0034578.1 mouse_genomes_project 9 41897681 41916104 - MGP_LPJ_P0091692 Oaf protein_coding protein_coding MGP_LPJ_T0011128.1 MGP_LPJ_G0009246.1 mouse_genomes_project 9 122090453 122090543 + Mir26a-1 miRNA miRNA MGP_LPJ_T0101082.1 MGP_LPJ_G0039345.1 mouse_genomes_project 9 16740523 16740652 + Gm23048 snoRNA snoRNA MGP_LPJ_T0094507.1 MGP_LPJ_G0035221.1 mouse_genomes_project 9 111732926 111735091 - Fbxw19 protein_coding retained_intron MGP_LPJ_T0094508.1 MGP_LPJ_G0035221.1 mouse_genomes_project 9 111734848 111820275 - MGP_LPJ_P0094508 Fbxw19 protein_coding protein_coding MGP_LPJ_T0016003.1 MGP_LPJ_G0014094.1 mouse_genomes_project 9 58738326 58738861 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091560.1 MGP_LPJ_G0034502.1 mouse_genomes_project 9 36830787 36833191 + MGP_LPJ_P0091560 Olfr913 protein_coding protein_coding MGP_LPJ_T0016084.1 MGP_LPJ_G0014175.1 mouse_genomes_project 9 98008856 98009550 + processed_pseudogene processed_pseudogene MGP_LPJ_T0093027.1 MGP_LPJ_G0034952.1 mouse_genomes_project 9 78779975 78807040 - MGP_LPJ_P0093027 Fbxo9 protein_coding protein_coding MGP_LPJ_T0093028.1 MGP_LPJ_G0034952.1 mouse_genomes_project 9 78779978 78807449 - MGP_LPJ_P0093028 Fbxo9 protein_coding protein_coding MGP_LPJ_T0093029.1 MGP_LPJ_G0034952.1 mouse_genomes_project 9 78780317 78783092 - Fbxo9 protein_coding retained_intron MGP_LPJ_T0093030.1 MGP_LPJ_G0034952.1 mouse_genomes_project 9 78784058 78785997 - Fbxo9 protein_coding retained_intron MGP_LPJ_T0093031.1 MGP_LPJ_G0034952.1 mouse_genomes_project 9 78793861 78806988 - MGP_LPJ_P0093031 Fbxo9 protein_coding protein_coding MGP_LPJ_T0093032.1 MGP_LPJ_G0034952.1 mouse_genomes_project 9 78798193 78806971 - MGP_LPJ_P0093032 Fbxo9 protein_coding protein_coding MGP_LPJ_T0094510.1 MGP_LPJ_G0035223.1 mouse_genomes_project 9 111975096 111999465 - MGP_LPJ_P0094510 protein_coding protein_coding MGP_LPJ_T0091533.1 MGP_LPJ_G0034476.1 mouse_genomes_project 9 36095712 36096763 + MGP_LPJ_P0091533 Olfr145 protein_coding protein_coding MGP_LPJ_T0015995.1 MGP_LPJ_G0014086.1 mouse_genomes_project 9 40245684 40246665 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016118.1 MGP_LPJ_G0014209.1 mouse_genomes_project 9 111826531 111827744 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011103.1 MGP_LPJ_G0009221.1 mouse_genomes_project 9 78248825 78248899 + Gm25250 miRNA miRNA MGP_LPJ_T0092224.1 MGP_LPJ_G0034752.1 mouse_genomes_project 9 56398946 56438752 + MGP_LPJ_P0092224 Snupn protein_coding protein_coding MGP_LPJ_T0016057.1 MGP_LPJ_G0014148.1 mouse_genomes_project 9 88869639 88870141 + processed_pseudogene processed_pseudogene MGP_LPJ_T0092991.1 MGP_LPJ_G0034944.1 mouse_genomes_project 9 77110825 77198020 - MGP_LPJ_P0092991 Fam83b protein_coding protein_coding MGP_LPJ_T0092992.1 MGP_LPJ_G0034944.1 mouse_genomes_project 9 77111476 77170006 - MGP_LPJ_P0092992 Fam83b protein_coding protein_coding MGP_LPJ_T0094022.1 MGP_LPJ_G0035151.1 mouse_genomes_project 9 109670217 109675672 + MGP_LPJ_P0094022 Ifrd2 protein_coding protein_coding MGP_LPJ_T0094023.1 MGP_LPJ_G0035151.1 mouse_genomes_project 9 109670301 109675672 + Ifrd2 protein_coding retained_intron MGP_LPJ_T0094024.1 MGP_LPJ_G0035151.1 mouse_genomes_project 9 109670332 109674269 + MGP_LPJ_P0094024 Ifrd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0094025.1 MGP_LPJ_G0035151.1 mouse_genomes_project 9 109673010 109673882 + Ifrd2 protein_coding retained_intron MGP_LPJ_T0094026.1 MGP_LPJ_G0035151.1 mouse_genomes_project 9 109673681 109675342 + MGP_LPJ_P0094026 Ifrd2 protein_coding protein_coding MGP_LPJ_T0094027.1 MGP_LPJ_G0035151.1 mouse_genomes_project 9 109674718 109675388 + MGP_LPJ_P0094027 Ifrd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0094028.1 MGP_LPJ_G0035151.1 mouse_genomes_project 9 109675260 109676023 + Ifrd2 protein_coding processed_transcript MGP_LPJ_T0002453.1 MGP_LPJ_G0002359.1 mouse_genomes_project 9 102342117 102345537 + TEC TEC MGP_LPJ_T0098337.1 MGP_LPJ_G0036618.1 mouse_genomes_project 9 98021080 98021196 - n-R5s87 rRNA rRNA MGP_LPJ_T0092480.1 MGP_LPJ_G0034818.1 mouse_genomes_project 9 62516971 62636858 + MGP_LPJ_P0092480 Itga11 protein_coding protein_coding MGP_LPJ_T0092481.1 MGP_LPJ_G0034818.1 mouse_genomes_project 9 62517005 62630147 + Itga11 protein_coding retained_intron MGP_LPJ_T0093902.1 MGP_LPJ_G0035130.1 mouse_genomes_project 9 108689705 108716705 - MGP_LPJ_P0093902 Tex264 protein_coding protein_coding MGP_LPJ_T0093903.1 MGP_LPJ_G0035130.1 mouse_genomes_project 9 108689705 108716564 - MGP_LPJ_P0093903 Tex264 protein_coding protein_coding MGP_LPJ_T0093904.1 MGP_LPJ_G0035130.1 mouse_genomes_project 9 108689711 108716797 - MGP_LPJ_P0093904 Tex264 protein_coding protein_coding MGP_LPJ_T0093905.1 MGP_LPJ_G0035130.1 mouse_genomes_project 9 108689951 108694945 - Tex264 protein_coding processed_transcript MGP_LPJ_T0093906.1 MGP_LPJ_G0035130.1 mouse_genomes_project 9 108690007 108716801 - Tex264 protein_coding processed_transcript MGP_LPJ_T0093907.1 MGP_LPJ_G0035130.1 mouse_genomes_project 9 108690196 108716809 - Tex264 protein_coding processed_transcript MGP_LPJ_T0093908.1 MGP_LPJ_G0035130.1 mouse_genomes_project 9 108693357 108716791 - Tex264 protein_coding processed_transcript MGP_LPJ_T0093909.1 MGP_LPJ_G0035130.1 mouse_genomes_project 9 108708984 108716187 - Tex264 protein_coding processed_transcript MGP_LPJ_T0093910.1 MGP_LPJ_G0035130.1 mouse_genomes_project 9 108715817 108716785 - Tex264 protein_coding processed_transcript MGP_LPJ_T0016056.1 MGP_LPJ_G0014147.1 mouse_genomes_project 9 88487427 88487905 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002484.1 MGP_LPJ_G0002390.1 mouse_genomes_project 9 110323575 110324397 - TEC TEC MGP_LPJ_T0093361.1 MGP_LPJ_G0035022.1 mouse_genomes_project 9 93703781 93744190 + MGP_LPJ_P0093361 Plscr4 protein_coding protein_coding MGP_LPJ_T0093362.1 MGP_LPJ_G0035022.1 mouse_genomes_project 9 93703802 93736123 + Plscr4 protein_coding retained_intron MGP_LPJ_T0091617.1 MGP_LPJ_G0034547.1 mouse_genomes_project 9 38390628 38391708 + MGP_LPJ_P0091617 Olfr974 protein_coding protein_coding MGP_LPJ_T0092044.1 MGP_LPJ_G0034688.1 mouse_genomes_project 9 50112742 50129897 + Ppp2r1b protein_coding processed_transcript MGP_LPJ_T0092045.1 MGP_LPJ_G0034688.1 mouse_genomes_project 9 50124295 50162787 + MGP_LPJ_P0092045 Ppp2r1b protein_coding protein_coding MGP_LPJ_T0092046.1 MGP_LPJ_G0034688.1 mouse_genomes_project 9 50124295 50164220 + MGP_LPJ_P0092046 Ppp2r1b protein_coding protein_coding MGP_LPJ_T0092047.1 MGP_LPJ_G0034688.1 mouse_genomes_project 9 50124308 50151401 + MGP_LPJ_P0092047 Ppp2r1b protein_coding protein_coding MGP_LPJ_T0092048.1 MGP_LPJ_G0034688.1 mouse_genomes_project 9 50124328 50150057 + MGP_LPJ_P0092048 Ppp2r1b protein_coding protein_coding MGP_LPJ_T0092049.1 MGP_LPJ_G0034688.1 mouse_genomes_project 9 50124334 50162794 + MGP_LPJ_P0092049 Ppp2r1b protein_coding protein_coding MGP_LPJ_T0092050.1 MGP_LPJ_G0034688.1 mouse_genomes_project 9 50124335 50162787 + MGP_LPJ_P0092050 Ppp2r1b protein_coding protein_coding MGP_LPJ_T0092051.1 MGP_LPJ_G0034688.1 mouse_genomes_project 9 50124337 50149903 + MGP_LPJ_P0092051 Ppp2r1b protein_coding protein_coding MGP_LPJ_T0092052.1 MGP_LPJ_G0034688.1 mouse_genomes_project 9 50124350 50150377 + MGP_LPJ_P0092052 Ppp2r1b protein_coding nonsense_mediated_decay MGP_LPJ_T0092053.1 MGP_LPJ_G0034688.1 mouse_genomes_project 9 50138953 50149998 + MGP_LPJ_P0092053 Ppp2r1b protein_coding nonsense_mediated_decay MGP_LPJ_T0092054.1 MGP_LPJ_G0034688.1 mouse_genomes_project 9 50143142 50148030 + Ppp2r1b protein_coding processed_transcript MGP_LPJ_T0092055.1 MGP_LPJ_G0034688.1 mouse_genomes_project 9 50148052 50149104 + Ppp2r1b protein_coding retained_intron MGP_LPJ_T0091033.1 MGP_LPJ_G0034293.1 mouse_genomes_project 9 16743751 16744690 + MGP_LPJ_P0091033 Olfr849 protein_coding protein_coding MGP_LPJ_T0016062.1 MGP_LPJ_G0014153.1 mouse_genomes_project 9 90908232 90908695 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009284.1 MGP_LPJ_G0007460.1 mouse_genomes_project 9 73176076 73180184 - lincRNA lincRNA MGP_LPJ_T0092893.1 MGP_LPJ_G0034918.1 mouse_genomes_project 9 73411259 73441911 + MGP_LPJ_P0092893 Ccpg1 protein_coding protein_coding MGP_LPJ_T0092894.1 MGP_LPJ_G0034918.1 mouse_genomes_project 9 73411334 73427331 + MGP_LPJ_P0092894 Ccpg1 protein_coding protein_coding MGP_LPJ_T0092895.1 MGP_LPJ_G0034918.1 mouse_genomes_project 9 73411408 73439509 + MGP_LPJ_P0092895 Ccpg1 protein_coding protein_coding MGP_LPJ_T0092896.1 MGP_LPJ_G0034918.1 mouse_genomes_project 9 73411416 73413886 + Ccpg1 protein_coding retained_intron MGP_LPJ_T0092897.1 MGP_LPJ_G0034918.1 mouse_genomes_project 9 73411435 73441909 + MGP_LPJ_P0092897 Ccpg1 protein_coding protein_coding MGP_LPJ_T0092898.1 MGP_LPJ_G0034918.1 mouse_genomes_project 9 73411435 73441571 + MGP_LPJ_P0092898 Ccpg1 protein_coding protein_coding MGP_LPJ_T0092899.1 MGP_LPJ_G0034918.1 mouse_genomes_project 9 73411438 73427603 + Ccpg1 protein_coding retained_intron MGP_LPJ_T0092900.1 MGP_LPJ_G0034918.1 mouse_genomes_project 9 73411449 73439501 + MGP_LPJ_P0092900 Ccpg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0092903.1 MGP_LPJ_G0034918.1 mouse_genomes_project 9 73435463 73437553 + Ccpg1 protein_coding retained_intron MGP_LPJ_T0092906.1 MGP_LPJ_G0034918.1 mouse_genomes_project 9 73440542 73441911 + Ccpg1 protein_coding retained_intron MGP_LPJ_T0101119.1 MGP_LPJ_G0039382.1 mouse_genomes_project 9 83080131 83080262 + Gm23748 snoRNA snoRNA MGP_LPJ_T0091129.1 MGP_LPJ_G0034340.1 mouse_genomes_project 9 18496464 18507830 - MGP_LPJ_P0091129 Cdc37 protein_coding protein_coding MGP_LPJ_T0091240.1 MGP_LPJ_G0034385.1 mouse_genomes_project 9 19949683 19971242 - MGP_LPJ_P0091240 Rp9 protein_coding protein_coding MGP_LPJ_T0091023.1 MGP_LPJ_G0034283.1 mouse_genomes_project 9 16218183 16232552 - MGP_LPJ_P0091023 protein_coding protein_coding MGP_LPJ_T0101131.1 MGP_LPJ_G0039394.1 mouse_genomes_project 9 103108390 103108522 - Gm24638 snoRNA snoRNA MGP_LPJ_T0094924.1 MGP_LPJ_G0035311.1 mouse_genomes_project 9 122605445 122689894 - MGP_LPJ_P0094924 Scn5a protein_coding protein_coding MGP_LPJ_T0094925.1 MGP_LPJ_G0035311.1 mouse_genomes_project 9 122605447 122706259 - MGP_LPJ_P0094925 Scn5a protein_coding protein_coding MGP_LPJ_T0094926.1 MGP_LPJ_G0035311.1 mouse_genomes_project 9 122606361 122706259 - MGP_LPJ_P0094926 Scn5a protein_coding protein_coding MGP_LPJ_T0094927.1 MGP_LPJ_G0035311.1 mouse_genomes_project 9 122607615 122689840 - MGP_LPJ_P0094927 Scn5a protein_coding unknown_likely_coding MGP_LPJ_T0094928.1 MGP_LPJ_G0035311.1 mouse_genomes_project 9 122689752 122690719 - MGP_LPJ_P0094928 Scn5a protein_coding protein_coding MGP_LPJ_T0018535.1 MGP_LPJ_G0015678.1 mouse_genomes_project 9 110254801 110261598 + 4930447F24Rik processed_transcript antisense MGP_LPJ_T0018536.1 MGP_LPJ_G0015678.1 mouse_genomes_project 9 110260548 110262261 + 4930447F24Rik processed_transcript antisense MGP_LPJ_T0018537.1 MGP_LPJ_G0015678.1 mouse_genomes_project 9 110261021 110261409 + 4930447F24Rik processed_transcript retained_intron MGP_LPJ_T0092993.1 MGP_LPJ_G0034945.1 mouse_genomes_project 9 77589927 77684277 - MGP_LPJ_P0092993 Tinag protein_coding nonsense_mediated_decay MGP_LPJ_T0092994.1 MGP_LPJ_G0034945.1 mouse_genomes_project 9 77589927 77684322 - MGP_LPJ_P0092994 Tinag protein_coding protein_coding MGP_LPJ_T0002428.1 MGP_LPJ_G0002334.1 mouse_genomes_project 9 88826332 88829138 + TEC TEC MGP_LPJ_T0016121.1 MGP_LPJ_G0014212.1 mouse_genomes_project 9 113562255 113562611 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091609.1 MGP_LPJ_G0034539.1 mouse_genomes_project 9 38122924 38123863 + MGP_LPJ_P0091609 Olfr965 protein_coding protein_coding MGP_LPJ_T0092185.1 MGP_LPJ_G0034737.1 mouse_genomes_project 9 54726939 54842336 + MGP_LPJ_P0092185 Tmem266 protein_coding protein_coding MGP_LPJ_T0092186.1 MGP_LPJ_G0034737.1 mouse_genomes_project 9 54726968 54842336 + MGP_LPJ_P0092186 Tmem266 protein_coding protein_coding MGP_LPJ_T0092187.1 MGP_LPJ_G0034737.1 mouse_genomes_project 9 54733219 54841349 + Tmem266 protein_coding processed_transcript MGP_LPJ_T0016076.1 MGP_LPJ_G0014167.1 mouse_genomes_project 9 94678675 94679678 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091690.1 MGP_LPJ_G0034577.1 mouse_genomes_project 9 41795670 41885313 - MGP_LPJ_P0091690 Pou2f3 protein_coding protein_coding MGP_LPJ_T0091691.1 MGP_LPJ_G0034577.1 mouse_genomes_project 9 41796270 41880249 - MGP_LPJ_P0091691 Pou2f3 protein_coding protein_coding MGP_LPJ_T0099808.1 MGP_LPJ_G0038071.1 mouse_genomes_project 9 17518951 17519096 - Gm26290 snRNA snRNA MGP_LPJ_T0094994.1 MGP_LPJ_G0035335.1 mouse_genomes_project 9 124968341 125002101 - MGP_LPJ_P0094994 Sec22c protein_coding protein_coding MGP_LPJ_T0094995.1 MGP_LPJ_G0035335.1 mouse_genomes_project 9 124971112 125002537 - MGP_LPJ_P0094995 Sec22c protein_coding protein_coding MGP_LPJ_T0094996.1 MGP_LPJ_G0035335.1 mouse_genomes_project 9 124972641 125002051 - MGP_LPJ_P0094996 Sec22c protein_coding nonsense_mediated_decay MGP_LPJ_T0094997.1 MGP_LPJ_G0035335.1 mouse_genomes_project 9 124976288 124978564 - Sec22c protein_coding retained_intron MGP_LPJ_T0094998.1 MGP_LPJ_G0035335.1 mouse_genomes_project 9 124983706 125002562 - MGP_LPJ_P0094998 Sec22c protein_coding protein_coding MGP_LPJ_T0091606.1 MGP_LPJ_G0034536.1 mouse_genomes_project 9 38011542 38034348 + MGP_LPJ_P0091606 Olfr961 protein_coding protein_coding MGP_LPJ_T0101422.1 MGP_LPJ_G0039593.1 mouse_genomes_project 9 109356940 109357823 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0101423.1 MGP_LPJ_G0039593.1 mouse_genomes_project 9 109357509 109361649 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0092830.1 MGP_LPJ_G0034908.1 mouse_genomes_project 9 72628263 72697003 + MGP_LPJ_P0092830 Zfp280d protein_coding protein_coding MGP_LPJ_T0092831.1 MGP_LPJ_G0034908.1 mouse_genomes_project 9 72628290 72719678 + MGP_LPJ_P0092831 Zfp280d protein_coding nonsense_mediated_decay MGP_LPJ_T0092832.1 MGP_LPJ_G0034908.1 mouse_genomes_project 9 72628291 72720765 + MGP_LPJ_P0092832 Zfp280d protein_coding nonsense_mediated_decay MGP_LPJ_T0092833.1 MGP_LPJ_G0034908.1 mouse_genomes_project 9 72628299 72641949 + Zfp280d protein_coding processed_transcript MGP_LPJ_T0092834.1 MGP_LPJ_G0034908.1 mouse_genomes_project 9 72628363 72640637 + Zfp280d protein_coding processed_transcript MGP_LPJ_T0092835.1 MGP_LPJ_G0034908.1 mouse_genomes_project 9 72628365 72654526 + Zfp280d protein_coding retained_intron MGP_LPJ_T0092836.1 MGP_LPJ_G0034908.1 mouse_genomes_project 9 72650639 72720784 + MGP_LPJ_P0092836 Zfp280d protein_coding nonsense_mediated_decay MGP_LPJ_T0092837.1 MGP_LPJ_G0034908.1 mouse_genomes_project 9 72650671 72719774 + MGP_LPJ_P0092837 Zfp280d protein_coding protein_coding MGP_LPJ_T0092838.1 MGP_LPJ_G0034908.1 mouse_genomes_project 9 72654077 72678346 + MGP_LPJ_P0092838 Zfp280d protein_coding nonsense_mediated_decay MGP_LPJ_T0092839.1 MGP_LPJ_G0034908.1 mouse_genomes_project 9 72662463 72664570 + Zfp280d protein_coding retained_intron MGP_LPJ_T0092840.1 MGP_LPJ_G0034908.1 mouse_genomes_project 9 72667401 72668978 + Zfp280d protein_coding processed_transcript MGP_LPJ_T0092841.1 MGP_LPJ_G0034908.1 mouse_genomes_project 9 72667441 72679405 + MGP_LPJ_P0092841 Zfp280d protein_coding nonsense_mediated_decay MGP_LPJ_T0092842.1 MGP_LPJ_G0034908.1 mouse_genomes_project 9 72667962 72675053 + Zfp280d protein_coding retained_intron MGP_LPJ_T0092843.1 MGP_LPJ_G0034908.1 mouse_genomes_project 9 72678352 72684602 + Zfp280d protein_coding retained_intron MGP_LPJ_T0092844.1 MGP_LPJ_G0034908.1 mouse_genomes_project 9 72683542 72685630 + Zfp280d protein_coding retained_intron MGP_LPJ_T0092845.1 MGP_LPJ_G0034908.1 mouse_genomes_project 9 72686988 72690492 + Zfp280d protein_coding retained_intron MGP_LPJ_T0092846.1 MGP_LPJ_G0034908.1 mouse_genomes_project 9 72687034 72719214 + MGP_LPJ_P0092846 Zfp280d protein_coding protein_coding MGP_LPJ_T0092847.1 MGP_LPJ_G0034908.1 mouse_genomes_project 9 72694657 72719935 + MGP_LPJ_P0092847 Zfp280d protein_coding protein_coding MGP_LPJ_T0092848.1 MGP_LPJ_G0034908.1 mouse_genomes_project 9 72716468 72720895 + MGP_LPJ_P0092848 Zfp280d protein_coding protein_coding MGP_LPJ_T0016018.1 MGP_LPJ_G0014109.1 mouse_genomes_project 9 72642881 72643326 + processed_pseudogene processed_pseudogene MGP_LPJ_T0092686.1 MGP_LPJ_G0034879.1 mouse_genomes_project 9 67108819 67130326 - MGP_LPJ_P0092686 Lactb protein_coding protein_coding MGP_LPJ_T0099823.1 MGP_LPJ_G0038086.1 mouse_genomes_project 9 46612951 46613058 - Gm22286 snRNA snRNA MGP_LPJ_T0018490.1 MGP_LPJ_G0015659.1 mouse_genomes_project 9 63961229 63964199 - 1700055C04Rik processed_transcript processed_transcript MGP_LPJ_T0002447.1 MGP_LPJ_G0002353.1 mouse_genomes_project 9 100047763 100048938 + TEC TEC MGP_LPJ_T0093711.1 MGP_LPJ_G0035096.1 mouse_genomes_project 9 106015138 106124460 - MGP_LPJ_P0093711 Dnajc13 protein_coding protein_coding MGP_LPJ_T0093712.1 MGP_LPJ_G0035096.1 mouse_genomes_project 9 106015908 106017353 - Dnajc13 protein_coding retained_intron MGP_LPJ_T0093713.1 MGP_LPJ_G0035096.1 mouse_genomes_project 9 106016029 106022090 - Dnajc13 protein_coding processed_transcript MGP_LPJ_T0093714.1 MGP_LPJ_G0035096.1 mouse_genomes_project 9 106016123 106022348 - Dnajc13 protein_coding retained_intron MGP_LPJ_T0093715.1 MGP_LPJ_G0035096.1 mouse_genomes_project 9 106016173 106108360 - MGP_LPJ_P0093715 Dnajc13 protein_coding protein_coding MGP_LPJ_T0093716.1 MGP_LPJ_G0035096.1 mouse_genomes_project 9 106022079 106028019 - MGP_LPJ_P0093716 Dnajc13 protein_coding nonsense_mediated_decay MGP_LPJ_T0093717.1 MGP_LPJ_G0035096.1 mouse_genomes_project 9 106027331 106030307 - MGP_LPJ_P0093717 Dnajc13 protein_coding protein_coding MGP_LPJ_T0093718.1 MGP_LPJ_G0035096.1 mouse_genomes_project 9 106030016 106033253 - Dnajc13 protein_coding retained_intron MGP_LPJ_T0093719.1 MGP_LPJ_G0035096.1 mouse_genomes_project 9 106050000 106054902 - Dnajc13 protein_coding retained_intron MGP_LPJ_T0093720.1 MGP_LPJ_G0035096.1 mouse_genomes_project 9 106057036 106069551 - MGP_LPJ_P0093720 Dnajc13 protein_coding nonsense_mediated_decay MGP_LPJ_T0093721.1 MGP_LPJ_G0035096.1 mouse_genomes_project 9 106060451 106068451 - Dnajc13 protein_coding retained_intron MGP_LPJ_T0093722.1 MGP_LPJ_G0035096.1 mouse_genomes_project 9 106063991 106070947 - Dnajc13 protein_coding retained_intron MGP_LPJ_T0093723.1 MGP_LPJ_G0035096.1 mouse_genomes_project 9 106089869 106090509 - Dnajc13 protein_coding retained_intron MGP_LPJ_T0093724.1 MGP_LPJ_G0035096.1 mouse_genomes_project 9 106099036 106124433 - Dnajc13 protein_coding retained_intron MGP_LPJ_T0094223.1 MGP_LPJ_G0035175.1 mouse_genomes_project 9 110213527 110323429 - MGP_LPJ_P0094223 Bsn protein_coding protein_coding MGP_LPJ_T0094224.1 MGP_LPJ_G0035175.1 mouse_genomes_project 9 110213528 110227833 - MGP_LPJ_P0094224 Bsn protein_coding protein_coding MGP_LPJ_T0091754.1 MGP_LPJ_G0034596.1 mouse_genomes_project 9 43107541 43115583 + MGP_LPJ_P0091754 Dpagt1 protein_coding protein_coding MGP_LPJ_T0091963.1 MGP_LPJ_G0034664.1 mouse_genomes_project 9 48288967 48292790 + Tmprss5 protein_coding retained_intron MGP_LPJ_T0091964.1 MGP_LPJ_G0034664.1 mouse_genomes_project 9 48288967 48303688 + MGP_LPJ_P0091964 Tmprss5 protein_coding nonsense_mediated_decay MGP_LPJ_T0091965.1 MGP_LPJ_G0034664.1 mouse_genomes_project 9 48289060 48303094 + MGP_LPJ_P0091965 Tmprss5 protein_coding protein_coding MGP_LPJ_T0091966.1 MGP_LPJ_G0034664.1 mouse_genomes_project 9 48289060 48303094 + MGP_LPJ_P0091966 Tmprss5 protein_coding protein_coding MGP_LPJ_T0091967.1 MGP_LPJ_G0034664.1 mouse_genomes_project 9 48295104 48303688 + MGP_LPJ_P0091967 Tmprss5 protein_coding nonsense_mediated_decay MGP_LPJ_T0015983.1 MGP_LPJ_G0014074.1 mouse_genomes_project 9 28949429 28950168 + processed_pseudogene processed_pseudogene MGP_LPJ_T0091739.1 MGP_LPJ_G0034592.1 mouse_genomes_project 9 43023949 43041657 - MGP_LPJ_P0091739 Nlrx1 protein_coding protein_coding MGP_LPJ_T0091740.1 MGP_LPJ_G0034592.1 mouse_genomes_project 9 43023949 43041245 - MGP_LPJ_P0091740 Nlrx1 protein_coding protein_coding MGP_LPJ_T0091741.1 MGP_LPJ_G0034592.1 mouse_genomes_project 9 43023949 43041549 - MGP_LPJ_P0091741 Nlrx1 protein_coding protein_coding MGP_LPJ_T0101619.1 MGP_LPJ_G0039692.1 mouse_genomes_project 9 101073798 101088670 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0101620.1 MGP_LPJ_G0039692.1 mouse_genomes_project 9 101088159 101092425 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0094901.1 MGP_LPJ_G0035304.1 mouse_genomes_project 9 122265356 122281171 - MGP_LPJ_P0094901 Slc22a13 protein_coding protein_coding MGP_LPJ_T0016016.1 MGP_LPJ_G0014107.1 mouse_genomes_project 9 72524559 72526464 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099824.1 MGP_LPJ_G0038087.1 mouse_genomes_project 9 49043932 49044039 - Gm25633 snRNA snRNA MGP_LPJ_T0091539.1 MGP_LPJ_G0034481.1 mouse_genomes_project 9 36275045 36275975 + MGP_LPJ_P0091539 Olfr885 protein_coding protein_coding MGP_LPJ_T0091049.1 MGP_LPJ_G0034309.1 mouse_genomes_project 9 17479725 17481333 - MGP_LPJ_P0091049 protein_coding protein_coding MGP_LPJ_T0093059.1 MGP_LPJ_G0034961.1 mouse_genomes_project 9 79124775 79156256 + MGP_LPJ_P0093059 Ddx43 protein_coding protein_coding MGP_LPJ_T0101084.1 MGP_LPJ_G0039347.1 mouse_genomes_project 9 18239332 18239412 + Gm23008 snoRNA snoRNA MGP_LPJ_T0101098.1 MGP_LPJ_G0039361.1 mouse_genomes_project 9 43183679 43183798 - Gm26306 snoRNA snoRNA MGP_LPJ_T0093214.1 MGP_LPJ_G0034990.1 mouse_genomes_project 9 87615057 87617799 + MGP_LPJ_P0093214 Rwdd2a protein_coding protein_coding MGP_LPJ_T0093215.1 MGP_LPJ_G0034990.1 mouse_genomes_project 9 87615082 87617965 + MGP_LPJ_P0093215 Rwdd2a protein_coding protein_coding MGP_LPJ_T0093216.1 MGP_LPJ_G0034990.1 mouse_genomes_project 9 87615119 87617906 + MGP_LPJ_P0093216 Rwdd2a protein_coding protein_coding MGP_LPJ_T0093557.1 MGP_LPJ_G0035065.1 mouse_genomes_project 9 101510930 101512995 - MGP_LPJ_P0093557 Sox14 protein_coding protein_coding MGP_LPJ_T0093558.1 MGP_LPJ_G0035065.1 mouse_genomes_project 9 101511044 101512480 - MGP_LPJ_P0093558 Sox14 protein_coding protein_coding MGP_LPJ_T0016039.1 MGP_LPJ_G0014130.1 mouse_genomes_project 9 79115450 79116028 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091029.1 MGP_LPJ_G0034289.1 mouse_genomes_project 9 16609759 16610689 + MGP_LPJ_P0091029 protein_coding protein_coding MGP_LPJ_T0090932.1 MGP_LPJ_G0034247.1 mouse_genomes_project 9 11358615 11387648 - MGP_LPJ_P0090932 Endod1 protein_coding protein_coding MGP_LPJ_T0092539.1 MGP_LPJ_G0034836.1 mouse_genomes_project 9 64223993 64251417 + MGP_LPJ_P0092539 Tipin protein_coding unknown_likely_coding MGP_LPJ_T0016092.1 MGP_LPJ_G0014183.1 mouse_genomes_project 9 100833647 100834167 - processed_pseudogene processed_pseudogene MGP_LPJ_T0094962.1 MGP_LPJ_G0035329.1 mouse_genomes_project 9 124180645 124203209 + MGP_LPJ_P0094962 Ctnnb1 protein_coding protein_coding MGP_LPJ_T0094963.1 MGP_LPJ_G0035329.1 mouse_genomes_project 9 124185973 124213081 + MGP_LPJ_P0094963 Ctnnb1 protein_coding protein_coding MGP_LPJ_T0094964.1 MGP_LPJ_G0035329.1 mouse_genomes_project 9 124186048 124213080 + MGP_LPJ_P0094964 Ctnnb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0094965.1 MGP_LPJ_G0035329.1 mouse_genomes_project 9 124186059 124209021 + Ctnnb1 protein_coding retained_intron MGP_LPJ_T0094966.1 MGP_LPJ_G0035329.1 mouse_genomes_project 9 124186151 124213080 + MGP_LPJ_P0094966 Ctnnb1 protein_coding protein_coding MGP_LPJ_T0094967.1 MGP_LPJ_G0035329.1 mouse_genomes_project 9 124186196 124204284 + MGP_LPJ_P0094967 Ctnnb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0094968.1 MGP_LPJ_G0035329.1 mouse_genomes_project 9 124186391 124203867 + MGP_LPJ_P0094968 Ctnnb1 protein_coding protein_coding MGP_LPJ_T0094969.1 MGP_LPJ_G0035329.1 mouse_genomes_project 9 124202794 124212091 + MGP_LPJ_P0094969 Ctnnb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0094970.1 MGP_LPJ_G0035329.1 mouse_genomes_project 9 124203662 124207973 + MGP_LPJ_P0094970 Ctnnb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0094971.1 MGP_LPJ_G0035329.1 mouse_genomes_project 9 124207698 124208415 + Ctnnb1 protein_coding processed_transcript MGP_LPJ_T0094972.1 MGP_LPJ_G0035329.1 mouse_genomes_project 9 124207870 124210213 + Ctnnb1 protein_coding processed_transcript MGP_LPJ_T0094973.1 MGP_LPJ_G0035329.1 mouse_genomes_project 9 124208030 124210108 + MGP_LPJ_P0094973 Ctnnb1 protein_coding protein_coding MGP_LPJ_T0094974.1 MGP_LPJ_G0035329.1 mouse_genomes_project 9 124208487 124211599 + MGP_LPJ_P0094974 Ctnnb1 protein_coding protein_coding MGP_LPJ_T0094975.1 MGP_LPJ_G0035329.1 mouse_genomes_project 9 124209440 124210398 + Ctnnb1 protein_coding retained_intron MGP_LPJ_T0002388.1 MGP_LPJ_G0002295.1 mouse_genomes_project 9 72200250 72203459 - TEC TEC MGP_LPJ_T0092056.1 MGP_LPJ_G0034689.1 mouse_genomes_project 9 50162790 50286028 - MGP_LPJ_P0092056 Sik2 protein_coding protein_coding MGP_LPJ_T0092057.1 MGP_LPJ_G0034689.1 mouse_genomes_project 9 50162790 50285928 - MGP_LPJ_P0092057 Sik2 protein_coding nonsense_mediated_decay MGP_LPJ_T0092058.1 MGP_LPJ_G0034689.1 mouse_genomes_project 9 50162790 50285891 - MGP_LPJ_P0092058 Sik2 protein_coding protein_coding MGP_LPJ_T0092059.1 MGP_LPJ_G0034689.1 mouse_genomes_project 9 50162790 50285891 - MGP_LPJ_P0092059 Sik2 protein_coding protein_coding MGP_LPJ_T0092060.1 MGP_LPJ_G0034689.1 mouse_genomes_project 9 50202636 50285981 - Sik2 protein_coding processed_transcript MGP_LPJ_T0092061.1 MGP_LPJ_G0034689.1 mouse_genomes_project 9 50205027 50285939 - Sik2 protein_coding processed_transcript MGP_LPJ_T0092062.1 MGP_LPJ_G0034689.1 mouse_genomes_project 9 50208296 50285955 - Sik2 protein_coding retained_intron MGP_LPJ_T0092063.1 MGP_LPJ_G0034689.1 mouse_genomes_project 9 50271011 50285966 - Sik2 protein_coding retained_intron MGP_LPJ_T0098076.1 MGP_LPJ_G0036357.1 mouse_genomes_project 9 43155329 43155891 - pseudogene pseudogene MGP_LPJ_T0009328.1 MGP_LPJ_G0007494.1 mouse_genomes_project 9 100325124 100391225 - E330023G01Rik lincRNA lincRNA MGP_LPJ_T0099845.1 MGP_LPJ_G0038108.1 mouse_genomes_project 9 74879555 74879670 + Gm24141 snRNA snRNA MGP_LPJ_T0015998.1 MGP_LPJ_G0014089.1 mouse_genomes_project 9 44755279 44756135 - processed_pseudogene processed_pseudogene MGP_LPJ_T0093349.1 MGP_LPJ_G0035019.1 mouse_genomes_project 9 93489605 93518030 + MGP_LPJ_P0093349 Plscr1 protein_coding protein_coding MGP_LPJ_T0093350.1 MGP_LPJ_G0035019.1 mouse_genomes_project 9 93490197 93517727 + MGP_LPJ_P0093350 Plscr1 protein_coding protein_coding MGP_LPJ_T0093351.1 MGP_LPJ_G0035019.1 mouse_genomes_project 9 93510532 93517729 + Plscr1 protein_coding retained_intron MGP_LPJ_T0005569.1 MGP_LPJ_G0004698.1 mouse_genomes_project 9 110121553 110129514 - Gm38134 antisense antisense MGP_LPJ_T0015986.1 MGP_LPJ_G0014077.1 mouse_genomes_project 9 31948477 31948709 + processed_pseudogene processed_pseudogene MGP_LPJ_T0091832.1 MGP_LPJ_G0034619.1 mouse_genomes_project 9 43801785 43812746 - MGP_LPJ_P0091832 Cd3g protein_coding protein_coding MGP_LPJ_T0091833.1 MGP_LPJ_G0034619.1 mouse_genomes_project 9 43801981 43803051 - Cd3g protein_coding retained_intron MGP_LPJ_T0091834.1 MGP_LPJ_G0034619.1 mouse_genomes_project 9 43805838 43812746 - MGP_LPJ_P0091834 Cd3g protein_coding protein_coding MGP_LPJ_T0092217.1 MGP_LPJ_G0034747.1 mouse_genomes_project 9 56054329 56123252 - MGP_LPJ_P0092217 Lingo1 protein_coding protein_coding MGP_LPJ_T0092218.1 MGP_LPJ_G0034747.1 mouse_genomes_project 9 56054942 56071485 - MGP_LPJ_P0092218 Lingo1 protein_coding protein_coding MGP_LPJ_T0092219.1 MGP_LPJ_G0034747.1 mouse_genomes_project 9 56054959 56083453 - MGP_LPJ_P0092219 Lingo1 protein_coding protein_coding MGP_LPJ_T0011129.1 MGP_LPJ_G0009247.1 mouse_genomes_project 9 124207659 124207721 + Mir7090 miRNA miRNA MGP_LPJ_T0090850.1 MGP_LPJ_G0034221.1 mouse_genomes_project 9 4376877 4390464 + MGP_LPJ_P0090850 protein_coding protein_coding MGP_LPJ_T0091266.1 MGP_LPJ_G0034392.1 mouse_genomes_project 9 22192860 22193503 + MGP_LPJ_P0091266 Cypt4 protein_coding protein_coding MGP_LPJ_T0002445.1 MGP_LPJ_G0002351.1 mouse_genomes_project 9 98816531 98818411 + TEC TEC MGP_LPJ_T0092565.1 MGP_LPJ_G0034840.1 mouse_genomes_project 9 64784221 64894406 + MGP_LPJ_P0092565 Dennd4a protein_coding protein_coding MGP_LPJ_T0101085.1 MGP_LPJ_G0039348.1 mouse_genomes_project 9 21909938 21910033 + Gm22380 snoRNA snoRNA MGP_LPJ_T0093177.1 MGP_LPJ_G0034984.1 mouse_genomes_project 9 86294879 86301781 - MGP_LPJ_P0093177 Fam46a protein_coding protein_coding MGP_LPJ_T0093178.1 MGP_LPJ_G0034984.1 mouse_genomes_project 9 86294879 86301557 - MGP_LPJ_P0093178 Fam46a protein_coding protein_coding MGP_LPJ_T0092188.1 MGP_LPJ_G0034738.1 mouse_genomes_project 9 54859117 54920596 - MGP_LPJ_P0092188 Etfa protein_coding protein_coding MGP_LPJ_T0092189.1 MGP_LPJ_G0034738.1 mouse_genomes_project 9 54880466 54894315 - Etfa protein_coding processed_transcript MGP_LPJ_T0092190.1 MGP_LPJ_G0034738.1 mouse_genomes_project 9 54893538 54920473 - Etfa protein_coding processed_transcript MGP_LPJ_T0092191.1 MGP_LPJ_G0034738.1 mouse_genomes_project 9 54895627 54920055 - Etfa protein_coding processed_transcript MGP_LPJ_T0016085.1 MGP_LPJ_G0014176.1 mouse_genomes_project 9 98056741 98056946 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005493.1 MGP_LPJ_G0004645.1 mouse_genomes_project 9 69602436 69618154 - Gm15511 antisense antisense MGP_LPJ_T0094346.1 MGP_LPJ_G0035193.1 mouse_genomes_project 9 110727792 110728826 - Ndufaf3 protein_coding retained_intron MGP_LPJ_T0094347.1 MGP_LPJ_G0035193.1 mouse_genomes_project 9 110727874 110728843 - MGP_LPJ_P0094347 Ndufaf3 protein_coding protein_coding MGP_LPJ_T0094348.1 MGP_LPJ_G0035193.1 mouse_genomes_project 9 110728092 110728846 - Ndufaf3 protein_coding retained_intron MGP_LPJ_T0092533.1 MGP_LPJ_G0034833.1 mouse_genomes_project 9 64116098 64119486 + MGP_LPJ_P0092533 Snapc5 protein_coding protein_coding MGP_LPJ_T0095118.1 MGP_LPJ_G0035380.1 mouse_genomes_project 9 127628061 127633635 + MGP_LPJ_P0095118 Ccr5 protein_coding protein_coding MGP_LPJ_T0095119.1 MGP_LPJ_G0035380.1 mouse_genomes_project 9 127628091 127631724 + Ccr5 protein_coding processed_transcript MGP_LPJ_T0095120.1 MGP_LPJ_G0035380.1 mouse_genomes_project 9 127628091 127638341 + MGP_LPJ_P0095120 Ccr5 protein_coding nonsense_mediated_decay MGP_LPJ_T0095121.1 MGP_LPJ_G0035380.1 mouse_genomes_project 9 127628099 127631188 + MGP_LPJ_P0095121 Ccr5 protein_coding protein_coding MGP_LPJ_T0095122.1 MGP_LPJ_G0035380.1 mouse_genomes_project 9 127633137 127636700 + Ccr5 protein_coding processed_transcript MGP_LPJ_T0015990.1 MGP_LPJ_G0014081.1 mouse_genomes_project 9 33652509 33652773 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091551.1 MGP_LPJ_G0034493.1 mouse_genomes_project 9 36616553 36618671 + MGP_LPJ_P0091551 Olfr251 protein_coding protein_coding MGP_LPJ_T0093982.1 MGP_LPJ_G0035144.1 mouse_genomes_project 9 109628941 109632942 + MGP_LPJ_P0093982 Zmynd10 protein_coding protein_coding MGP_LPJ_T0093983.1 MGP_LPJ_G0035144.1 mouse_genomes_project 9 109628947 109629513 + Zmynd10 protein_coding processed_transcript MGP_LPJ_T0093984.1 MGP_LPJ_G0035144.1 mouse_genomes_project 9 109629097 109632942 + MGP_LPJ_P0093984 Zmynd10 protein_coding nonsense_mediated_decay MGP_LPJ_T0093985.1 MGP_LPJ_G0035144.1 mouse_genomes_project 9 109630790 109631838 + Zmynd10 protein_coding retained_intron MGP_LPJ_T0093986.1 MGP_LPJ_G0035144.1 mouse_genomes_project 9 109632111 109632842 + Zmynd10 protein_coding retained_intron MGP_LPJ_T0091259.1 MGP_LPJ_G0034390.1 mouse_genomes_project 9 21971884 22055407 - MGP_LPJ_P0091259 Dpy19l1 protein_coding protein_coding MGP_LPJ_T0091260.1 MGP_LPJ_G0034390.1 mouse_genomes_project 9 21971886 22072391 - MGP_LPJ_P0091260 Dpy19l1 protein_coding protein_coding MGP_LPJ_T0091261.1 MGP_LPJ_G0034390.1 mouse_genomes_project 9 21971911 22072391 - MGP_LPJ_P0091261 Dpy19l1 protein_coding protein_coding MGP_LPJ_T0091262.1 MGP_LPJ_G0034390.1 mouse_genomes_project 9 21972159 21984585 - Dpy19l1 protein_coding retained_intron MGP_LPJ_T0091263.1 MGP_LPJ_G0034390.1 mouse_genomes_project 9 21982914 21987044 - Dpy19l1 protein_coding retained_intron MGP_LPJ_T0091264.1 MGP_LPJ_G0034390.1 mouse_genomes_project 9 22049469 22066423 - Dpy19l1 protein_coding processed_transcript MGP_LPJ_T0092766.1 MGP_LPJ_G0034893.1 mouse_genomes_project 9 70497687 70710423 + MGP_LPJ_P0092766 Myo1e protein_coding protein_coding MGP_LPJ_T0016072.1 MGP_LPJ_G0014163.1 mouse_genomes_project 9 93804695 93804843 - processed_pseudogene processed_pseudogene MGP_LPJ_T0093896.1 MGP_LPJ_G0035127.1 mouse_genomes_project 9 108601649 108604199 - MGP_LPJ_P0093896 Iqcf4 protein_coding protein_coding MGP_LPJ_T0092791.1 MGP_LPJ_G0034902.1 mouse_genomes_project 9 71541867 71625856 + MGP_LPJ_P0092791 Aldh1a2 protein_coding protein_coding MGP_LPJ_T0092593.1 MGP_LPJ_G0034856.1 mouse_genomes_project 9 65473161 65501786 + MGP_LPJ_P0092593 Spg21 protein_coding protein_coding MGP_LPJ_T0091623.1 MGP_LPJ_G0034553.1 mouse_genomes_project 9 38476934 38477931 + MGP_LPJ_P0091623 Olfr981 protein_coding protein_coding MGP_LPJ_T0005486.1 MGP_LPJ_G0004641.1 mouse_genomes_project 9 66506774 66509670 - Gm28379 antisense antisense MGP_LPJ_T0005487.1 MGP_LPJ_G0004641.1 mouse_genomes_project 9 66507331 66538543 - Gm28379 antisense antisense MGP_LPJ_T0011112.1 MGP_LPJ_G0009230.1 mouse_genomes_project 9 109293334 109293422 - Gm22238 miRNA miRNA MGP_LPJ_T0101089.1 MGP_LPJ_G0039352.1 mouse_genomes_project 9 31929724 31929855 + Gm25439 snoRNA snoRNA MGP_LPJ_T0011765.1 MGP_LPJ_G0009883.1 mouse_genomes_project 9 124032783 124033104 - Gm23624 misc_RNA misc_RNA MGP_LPJ_T0009330.1 MGP_LPJ_G0007496.1 mouse_genomes_project 9 101659541 101671935 + 4930519F24Rik lincRNA lincRNA MGP_LPJ_T0091120.1 MGP_LPJ_G0034332.1 mouse_genomes_project 9 18355313 18361213 + MGP_LPJ_P0091120 Mrpl4 protein_coding protein_coding MGP_LPJ_T0002382.1 MGP_LPJ_G0002289.1 mouse_genomes_project 9 33419596 33420756 - TEC TEC MGP_LPJ_T0091579.1 MGP_LPJ_G0034515.1 mouse_genomes_project 9 37261206 37262209 + MGP_LPJ_P0091579 protein_coding protein_coding MGP_LPJ_T0002385.1 MGP_LPJ_G0002292.1 mouse_genomes_project 9 55840482 55842516 - TEC TEC MGP_LPJ_T0091962.1 MGP_LPJ_G0034663.1 mouse_genomes_project 9 48237814 48261746 + MGP_LPJ_P0091962 Zw10 protein_coding protein_coding MGP_LPJ_T0095086.1 MGP_LPJ_G0035368.1 mouse_genomes_project 9 126919587 126980086 + MGP_LPJ_P0095086 Sacm1l protein_coding protein_coding MGP_LPJ_T0009298.1 MGP_LPJ_G0007473.1 mouse_genomes_project 9 83093754 83096955 + 1700063H06Rik lincRNA lincRNA MGP_LPJ_T0094433.1 MGP_LPJ_G0035206.1 mouse_genomes_project 9 111089035 111122568 + MGP_LPJ_P0094433 Col7a1 protein_coding protein_coding MGP_LPJ_T0094434.1 MGP_LPJ_G0035206.1 mouse_genomes_project 9 111089194 111122568 + MGP_LPJ_P0094434 Col7a1 protein_coding protein_coding MGP_LPJ_T0094435.1 MGP_LPJ_G0035206.1 mouse_genomes_project 9 111089194 111122572 + MGP_LPJ_P0094435 Col7a1 protein_coding unknown_likely_coding MGP_LPJ_T0094436.1 MGP_LPJ_G0035206.1 mouse_genomes_project 9 111089936 111090876 + Col7a1 protein_coding retained_intron MGP_LPJ_T0094437.1 MGP_LPJ_G0035206.1 mouse_genomes_project 9 111103101 111103780 + Col7a1 protein_coding retained_intron MGP_LPJ_T0094438.1 MGP_LPJ_G0035206.1 mouse_genomes_project 9 111105130 111117908 + Col7a1 protein_coding retained_intron MGP_LPJ_T0094439.1 MGP_LPJ_G0035206.1 mouse_genomes_project 9 111113020 111114874 + Col7a1 protein_coding retained_intron MGP_LPJ_T0094440.1 MGP_LPJ_G0035206.1 mouse_genomes_project 9 111120346 111122196 + Col7a1 protein_coding retained_intron MGP_LPJ_T0094441.1 MGP_LPJ_G0035206.1 mouse_genomes_project 9 111120579 111121609 + Col7a1 protein_coding retained_intron MGP_LPJ_T0094261.1 MGP_LPJ_G0035183.1 mouse_genomes_project 9 110544614 110562639 + MGP_LPJ_P0094261 1700102P08Rik protein_coding protein_coding MGP_LPJ_T0094262.1 MGP_LPJ_G0035183.1 mouse_genomes_project 9 110544643 110549574 + MGP_LPJ_P0094262 1700102P08Rik protein_coding protein_coding MGP_LPJ_T0092513.1 MGP_LPJ_G0034830.1 mouse_genomes_project 9 64047381 64070882 + MGP_LPJ_P0092513 Lctl protein_coding protein_coding MGP_LPJ_T0092514.1 MGP_LPJ_G0034830.1 mouse_genomes_project 9 64047406 64048370 + Lctl protein_coding retained_intron MGP_LPJ_T0092515.1 MGP_LPJ_G0034830.1 mouse_genomes_project 9 64047463 64048246 + Lctl protein_coding processed_transcript MGP_LPJ_T0092516.1 MGP_LPJ_G0034830.1 mouse_genomes_project 9 64047493 64070878 + MGP_LPJ_P0092516 Lctl protein_coding nonsense_mediated_decay MGP_LPJ_T0092517.1 MGP_LPJ_G0034830.1 mouse_genomes_project 9 64051851 64070869 + MGP_LPJ_P0092517 Lctl protein_coding protein_coding MGP_LPJ_T0092518.1 MGP_LPJ_G0034830.1 mouse_genomes_project 9 64053415 64058164 + Lctl protein_coding retained_intron MGP_LPJ_T0099857.1 MGP_LPJ_G0038120.1 mouse_genomes_project 9 95991383 95991479 + Gm24178 snRNA snRNA MGP_LPJ_T0091555.1 MGP_LPJ_G0034497.1 mouse_genomes_project 9 36706407 36707340 + MGP_LPJ_P0091555 Olfr904 protein_coding protein_coding MGP_LPJ_T0009363.1 MGP_LPJ_G0007521.1 mouse_genomes_project 9 121148798 121170292 + Gm17399 lincRNA lincRNA MGP_LPJ_T0002500.1 MGP_LPJ_G0002406.1 mouse_genomes_project 9 125055123 125058451 - TEC TEC MGP_LPJ_T0005530.1 MGP_LPJ_G0004668.1 mouse_genomes_project 9 97446606 97478637 - antisense antisense MGP_LPJ_T0101118.1 MGP_LPJ_G0039381.1 mouse_genomes_project 9 78712984 78713111 - Gm23609 snoRNA snoRNA MGP_LPJ_T0009232.1 MGP_LPJ_G0007419.1 mouse_genomes_project 9 30803551 30826594 + Gm3331 lincRNA lincRNA MGP_LPJ_T0093089.1 MGP_LPJ_G0034971.1 mouse_genomes_project 9 80869290 80898190 + Senp6 protein_coding retained_intron MGP_LPJ_T0093090.1 MGP_LPJ_G0034971.1 mouse_genomes_project 9 80869290 80952986 + MGP_LPJ_P0093090 Senp6 protein_coding protein_coding MGP_LPJ_T0093091.1 MGP_LPJ_G0034971.1 mouse_genomes_project 9 80869323 80919945 + MGP_LPJ_P0093091 Senp6 protein_coding protein_coding MGP_LPJ_T0093092.1 MGP_LPJ_G0034971.1 mouse_genomes_project 9 80869486 80952814 + MGP_LPJ_P0093092 Senp6 protein_coding nonsense_mediated_decay MGP_LPJ_T0093093.1 MGP_LPJ_G0034971.1 mouse_genomes_project 9 80869911 80951895 + MGP_LPJ_P0093093 Senp6 protein_coding protein_coding MGP_LPJ_T0093094.1 MGP_LPJ_G0034971.1 mouse_genomes_project 9 80870204 80891289 + Senp6 protein_coding processed_transcript MGP_LPJ_T0093095.1 MGP_LPJ_G0034971.1 mouse_genomes_project 9 80896015 80928930 + MGP_LPJ_P0093095 Senp6 protein_coding protein_coding MGP_LPJ_T0093096.1 MGP_LPJ_G0034971.1 mouse_genomes_project 9 80909363 80951745 + MGP_LPJ_P0093096 Senp6 protein_coding protein_coding MGP_LPJ_T0093097.1 MGP_LPJ_G0034971.1 mouse_genomes_project 9 80920213 80924938 + MGP_LPJ_P0093097 Senp6 protein_coding protein_coding MGP_LPJ_T0093098.1 MGP_LPJ_G0034971.1 mouse_genomes_project 9 80920230 80929002 + Senp6 protein_coding processed_transcript MGP_LPJ_T0093099.1 MGP_LPJ_G0034971.1 mouse_genomes_project 9 80930746 80944861 + MGP_LPJ_P0093099 Senp6 protein_coding protein_coding MGP_LPJ_T0093100.1 MGP_LPJ_G0034971.1 mouse_genomes_project 9 80944661 80952204 + Senp6 protein_coding retained_intron MGP_LPJ_T0093101.1 MGP_LPJ_G0034971.1 mouse_genomes_project 9 80947323 80951742 + Senp6 protein_coding retained_intron MGP_LPJ_T0093102.1 MGP_LPJ_G0034971.1 mouse_genomes_project 9 80950077 80952038 + Senp6 protein_coding retained_intron MGP_LPJ_T0101083.1 MGP_LPJ_G0039346.1 mouse_genomes_project 9 18238059 18238144 + Gm24067 snoRNA snoRNA MGP_LPJ_T0091864.1 MGP_LPJ_G0034634.1 mouse_genomes_project 9 44295430 44660718 + MGP_LPJ_P0091864 Dscaml1 protein_coding protein_coding MGP_LPJ_T0091518.1 MGP_LPJ_G0034466.1 mouse_genomes_project 9 35714662 35719467 + MGP_LPJ_P0091518 Vsig2 protein_coding protein_coding MGP_LPJ_T0005553.1 MGP_LPJ_G0004687.1 mouse_genomes_project 9 108947201 108949496 + 4930524O07Rik antisense antisense MGP_LPJ_T0005554.1 MGP_LPJ_G0004687.1 mouse_genomes_project 9 108947825 108949494 + 4930524O07Rik antisense antisense MGP_LPJ_T0005555.1 MGP_LPJ_G0004687.1 mouse_genomes_project 9 108948268 108950843 + 4930524O07Rik antisense antisense MGP_LPJ_T0092281.1 MGP_LPJ_G0034772.1 mouse_genomes_project 9 57225322 57231608 + MGP_LPJ_P0092281 Cyp1a1 protein_coding protein_coding MGP_LPJ_T0098334.1 MGP_LPJ_G0036615.1 mouse_genomes_project 9 74552645 74552764 + n-R5s86 rRNA rRNA MGP_LPJ_T0092298.1 MGP_LPJ_G0034778.1 mouse_genomes_project 9 57553360 57567594 + MGP_LPJ_P0092298 Cyp11a1 protein_coding protein_coding MGP_LPJ_T0092299.1 MGP_LPJ_G0034778.1 mouse_genomes_project 9 57561556 57575095 + MGP_LPJ_P0092299 Cyp11a1 protein_coding protein_coding MGP_LPJ_T0092300.1 MGP_LPJ_G0034778.1 mouse_genomes_project 9 57561882 57569238 + Cyp11a1 protein_coding retained_intron MGP_LPJ_T0092301.1 MGP_LPJ_G0034778.1 mouse_genomes_project 9 57564247 57573315 + MGP_LPJ_P0092301 Cyp11a1 protein_coding protein_coding MGP_LPJ_T0002399.1 MGP_LPJ_G0002306.1 mouse_genomes_project 9 72807666 72810936 + TEC TEC MGP_LPJ_T0009235.1 MGP_LPJ_G0007422.1 mouse_genomes_project 9 32000184 32013414 + lincRNA lincRNA MGP_LPJ_T0009220.1 MGP_LPJ_G0007407.1 mouse_genomes_project 9 10197864 10198267 - Gm29176 lincRNA lincRNA MGP_LPJ_T0094987.1 MGP_LPJ_G0035333.1 mouse_genomes_project 9 124856513 124927097 - MGP_LPJ_P0094987 Lyzl4 protein_coding protein_coding MGP_LPJ_T0094988.1 MGP_LPJ_G0035333.1 mouse_genomes_project 9 124856519 124927627 - MGP_LPJ_P0094988 Lyzl4 protein_coding protein_coding MGP_LPJ_T0094989.1 MGP_LPJ_G0035333.1 mouse_genomes_project 9 124862757 124927057 - MGP_LPJ_P0094989 Lyzl4 protein_coding protein_coding MGP_LPJ_T0092277.1 MGP_LPJ_G0034769.1 mouse_genomes_project 9 57120560 57137311 - MGP_LPJ_P0092277 Lman1l protein_coding protein_coding MGP_LPJ_T0092278.1 MGP_LPJ_G0034769.1 mouse_genomes_project 9 57120560 57137311 - MGP_LPJ_P0092278 Lman1l protein_coding protein_coding MGP_LPJ_T0092421.1 MGP_LPJ_G0034806.1 mouse_genomes_project 9 60279666 60414395 - MGP_LPJ_P0092421 Lrrc49 protein_coding nonsense_mediated_decay MGP_LPJ_T0092422.1 MGP_LPJ_G0034806.1 mouse_genomes_project 9 60299752 60413710 - MGP_LPJ_P0092422 Lrrc49 protein_coding protein_coding MGP_LPJ_T0092423.1 MGP_LPJ_G0034806.1 mouse_genomes_project 9 60299754 60414389 - MGP_LPJ_P0092423 Lrrc49 protein_coding protein_coding MGP_LPJ_T0092424.1 MGP_LPJ_G0034806.1 mouse_genomes_project 9 60299754 60414429 - MGP_LPJ_P0092424 Lrrc49 protein_coding protein_coding MGP_LPJ_T0092425.1 MGP_LPJ_G0034806.1 mouse_genomes_project 9 60299764 60413804 - MGP_LPJ_P0092425 Lrrc49 protein_coding protein_coding MGP_LPJ_T0092426.1 MGP_LPJ_G0034806.1 mouse_genomes_project 9 60300423 60312043 - Lrrc49 protein_coding retained_intron MGP_LPJ_T0092427.1 MGP_LPJ_G0034806.1 mouse_genomes_project 9 60323178 60414173 - Lrrc49 protein_coding retained_intron MGP_LPJ_T0092428.1 MGP_LPJ_G0034806.1 mouse_genomes_project 9 60323732 60371324 - Lrrc49 protein_coding processed_transcript MGP_LPJ_T0092429.1 MGP_LPJ_G0034806.1 mouse_genomes_project 9 60406995 60413942 - MGP_LPJ_P0092429 Lrrc49 protein_coding protein_coding MGP_LPJ_T0098073.1 MGP_LPJ_G0036354.1 mouse_genomes_project 9 36418242 36419168 + pseudogene pseudogene MGP_LPJ_T0016030.1 MGP_LPJ_G0014121.1 mouse_genomes_project 9 77278569 77279323 + processed_pseudogene processed_pseudogene MGP_LPJ_T0092133.1 MGP_LPJ_G0034721.1 mouse_genomes_project 9 53947713 53965858 + MGP_LPJ_P0092133 Idh3a protein_coding protein_coding MGP_LPJ_T0099838.1 MGP_LPJ_G0038101.1 mouse_genomes_project 9 70835034 70835133 + Gm23588 snRNA snRNA MGP_LPJ_T0092431.1 MGP_LPJ_G0034808.1 mouse_genomes_project 9 60521041 60611111 + MGP_LPJ_P0092431 Uaca protein_coding protein_coding MGP_LPJ_T0018526.1 MGP_LPJ_G0015674.1 mouse_genomes_project 9 100536346 100543484 - Foxl2os processed_transcript lincRNA MGP_LPJ_T0018527.1 MGP_LPJ_G0015674.1 mouse_genomes_project 9 100541974 100542469 - Foxl2os processed_transcript retained_intron MGP_LPJ_T0018528.1 MGP_LPJ_G0015674.1 mouse_genomes_project 9 100542056 100542983 - Foxl2os processed_transcript retained_intron MGP_LPJ_T0093064.1 MGP_LPJ_G0034964.1 mouse_genomes_project 9 79183272 79209391 + MGP_LPJ_P0093064 Mto1 protein_coding protein_coding MGP_LPJ_T0093065.1 MGP_LPJ_G0034964.1 mouse_genomes_project 9 79183272 79209391 + MGP_LPJ_P0093065 Mto1 protein_coding nonsense_mediated_decay MGP_LPJ_T0093066.1 MGP_LPJ_G0034964.1 mouse_genomes_project 9 79183277 79185529 + Mto1 protein_coding retained_intron MGP_LPJ_T0093067.1 MGP_LPJ_G0034964.1 mouse_genomes_project 9 79199396 79205053 + Mto1 protein_coding retained_intron MGP_LPJ_T0093068.1 MGP_LPJ_G0034964.1 mouse_genomes_project 9 79199689 79210588 + MGP_LPJ_P0093068 Mto1 protein_coding protein_coding MGP_LPJ_T0093069.1 MGP_LPJ_G0034964.1 mouse_genomes_project 9 79204704 79209072 + Mto1 protein_coding retained_intron MGP_LPJ_T0091034.1 MGP_LPJ_G0034294.1 mouse_genomes_project 9 16787621 16788569 - MGP_LPJ_P0091034 Olfr850 protein_coding protein_coding MGP_LPJ_T0005514.1 MGP_LPJ_G0004660.1 mouse_genomes_project 9 84302575 84326407 + Gm2087 antisense antisense MGP_LPJ_T0091673.1 MGP_LPJ_G0034571.1 mouse_genomes_project 9 40869807 40880383 - MGP_LPJ_P0091673 Sc5d protein_coding protein_coding MGP_LPJ_T0091674.1 MGP_LPJ_G0034571.1 mouse_genomes_project 9 40870383 40880283 - MGP_LPJ_P0091674 Sc5d protein_coding protein_coding MGP_LPJ_T0091352.1 MGP_LPJ_G0034420.1 mouse_genomes_project 9 30060995 30229422 + MGP_LPJ_P0091352 Arhgap32 protein_coding protein_coding MGP_LPJ_T0091353.1 MGP_LPJ_G0034420.1 mouse_genomes_project 9 30074432 30137771 + MGP_LPJ_P0091353 Arhgap32 protein_coding protein_coding MGP_LPJ_T0091354.1 MGP_LPJ_G0034420.1 mouse_genomes_project 9 30137715 30163190 + Arhgap32 protein_coding retained_intron MGP_LPJ_T0091355.1 MGP_LPJ_G0034420.1 mouse_genomes_project 9 30162274 30220271 + MGP_LPJ_P0091355 Arhgap32 protein_coding protein_coding MGP_LPJ_T0091356.1 MGP_LPJ_G0034420.1 mouse_genomes_project 9 30178837 30223287 + MGP_LPJ_P0091356 Arhgap32 protein_coding protein_coding MGP_LPJ_T0091357.1 MGP_LPJ_G0034420.1 mouse_genomes_project 9 30179180 30202569 + MGP_LPJ_P0091357 Arhgap32 protein_coding protein_coding MGP_LPJ_T0091358.1 MGP_LPJ_G0034420.1 mouse_genomes_project 9 30201741 30208051 + Arhgap32 protein_coding retained_intron MGP_LPJ_T0093242.1 MGP_LPJ_G0034997.1 mouse_genomes_project 9 88272221 88343494 - MGP_LPJ_P0093242 Cep162 protein_coding protein_coding MGP_LPJ_T0093243.1 MGP_LPJ_G0034997.1 mouse_genomes_project 9 88289032 88296196 - Cep162 protein_coding processed_transcript MGP_LPJ_T0093244.1 MGP_LPJ_G0034997.1 mouse_genomes_project 9 88312100 88315879 - Cep162 protein_coding retained_intron MGP_LPJ_T0093245.1 MGP_LPJ_G0034997.1 mouse_genomes_project 9 88312852 88343246 - Cep162 protein_coding retained_intron MGP_LPJ_T0091447.1 MGP_LPJ_G0034451.1 mouse_genomes_project 9 34809850 34812700 - MGP_LPJ_P0091447 A630095E13Rik protein_coding protein_coding MGP_LPJ_T0091448.1 MGP_LPJ_G0034451.1 mouse_genomes_project 9 34809850 34812700 - MGP_LPJ_P0091448 A630095E13Rik protein_coding protein_coding MGP_LPJ_T0091449.1 MGP_LPJ_G0034451.1 mouse_genomes_project 9 34809852 34817448 - A630095E13Rik protein_coding retained_intron MGP_LPJ_T0091886.1 MGP_LPJ_G0034638.1 mouse_genomes_project 9 44827242 44851662 + MGP_LPJ_P0091886 Pcsk7 protein_coding unknown_likely_coding MGP_LPJ_T0091836.1 MGP_LPJ_G0034621.1 mouse_genomes_project 9 43831833 43844800 - MGP_LPJ_P0091836 Cd3e protein_coding protein_coding MGP_LPJ_T0091073.1 MGP_LPJ_G0034318.1 mouse_genomes_project 9 17800392 17826742 - MGP_LPJ_P0091073 Zfp266 protein_coding protein_coding MGP_LPJ_T0091074.1 MGP_LPJ_G0034318.1 mouse_genomes_project 9 17804390 17826733 - MGP_LPJ_P0091074 Zfp266 protein_coding protein_coding MGP_LPJ_T0011093.1 MGP_LPJ_G0009211.1 mouse_genomes_project 9 64948030 64948402 - miRNA miRNA MGP_LPJ_T0016052.1 MGP_LPJ_G0014143.1 mouse_genomes_project 9 86794525 86795333 - processed_pseudogene processed_pseudogene MGP_LPJ_T0093489.1 MGP_LPJ_G0035046.1 mouse_genomes_project 9 99851949 99852532 + MGP_LPJ_P0093489 protein_coding protein_coding MGP_LPJ_T0094000.1 MGP_LPJ_G0035147.1 mouse_genomes_project 9 109649566 109654396 + MGP_LPJ_P0094000 Hyal2 protein_coding protein_coding MGP_LPJ_T0094001.1 MGP_LPJ_G0035147.1 mouse_genomes_project 9 109649566 109652011 + MGP_LPJ_P0094001 Hyal2 protein_coding protein_coding MGP_LPJ_T0094002.1 MGP_LPJ_G0035147.1 mouse_genomes_project 9 109650733 109654393 + MGP_LPJ_P0094002 Hyal2 protein_coding protein_coding MGP_LPJ_T0094003.1 MGP_LPJ_G0035147.1 mouse_genomes_project 9 109650757 109653580 + MGP_LPJ_P0094003 Hyal2 protein_coding protein_coding MGP_LPJ_T0094004.1 MGP_LPJ_G0035147.1 mouse_genomes_project 9 109651011 109652229 + MGP_LPJ_P0094004 Hyal2 protein_coding protein_coding MGP_LPJ_T0094005.1 MGP_LPJ_G0035147.1 mouse_genomes_project 9 109651421 109654389 + MGP_LPJ_P0094005 Hyal2 protein_coding protein_coding MGP_LPJ_T0094006.1 MGP_LPJ_G0035147.1 mouse_genomes_project 9 109652826 109653820 + Hyal2 protein_coding retained_intron MGP_LPJ_T0091046.1 MGP_LPJ_G0034306.1 mouse_genomes_project 9 17358900 17359896 - MGP_LPJ_P0091046 Olfr867 protein_coding protein_coding MGP_LPJ_T0094999.1 MGP_LPJ_G0035336.1 mouse_genomes_project 9 125007460 125009993 + MGP_LPJ_P0094999 Deb1 protein_coding protein_coding MGP_LPJ_T0091624.1 MGP_LPJ_G0034554.1 mouse_genomes_project 9 38549653 38550619 + MGP_LPJ_P0091624 Olfr982 protein_coding protein_coding MGP_LPJ_T0091989.1 MGP_LPJ_G0034678.1 mouse_genomes_project 9 49864730 49877796 - MGP_LPJ_P0091989 AU019823 protein_coding protein_coding MGP_LPJ_T0091990.1 MGP_LPJ_G0034678.1 mouse_genomes_project 9 49864734 49877796 - MGP_LPJ_P0091990 AU019823 protein_coding protein_coding MGP_LPJ_T0091991.1 MGP_LPJ_G0034678.1 mouse_genomes_project 9 49867043 49877599 - MGP_LPJ_P0091991 AU019823 protein_coding protein_coding MGP_LPJ_T0091992.1 MGP_LPJ_G0034678.1 mouse_genomes_project 9 49867152 49877613 - MGP_LPJ_P0091992 AU019823 protein_coding protein_coding MGP_LPJ_T0091993.1 MGP_LPJ_G0034678.1 mouse_genomes_project 9 49867185 49877596 - MGP_LPJ_P0091993 AU019823 protein_coding protein_coding MGP_LPJ_T0018491.1 MGP_LPJ_G0015660.1 mouse_genomes_project 9 64008313 64015820 + Scarletltr processed_transcript processed_transcript MGP_LPJ_T0092143.1 MGP_LPJ_G0034725.1 mouse_genomes_project 9 54086646 54106385 - MGP_LPJ_P0092143 Wdr61 protein_coding protein_coding MGP_LPJ_T0092144.1 MGP_LPJ_G0034725.1 mouse_genomes_project 9 54089066 54106400 - MGP_LPJ_P0092144 Wdr61 protein_coding protein_coding MGP_LPJ_T0092145.1 MGP_LPJ_G0034725.1 mouse_genomes_project 9 54091131 54092726 - Wdr61 protein_coding retained_intron MGP_LPJ_T0092146.1 MGP_LPJ_G0034725.1 mouse_genomes_project 9 54094436 54096269 - Wdr61 protein_coding retained_intron MGP_LPJ_T0015992.1 MGP_LPJ_G0014083.1 mouse_genomes_project 9 34747424 34747816 + processed_pseudogene processed_pseudogene MGP_LPJ_T0094530.1 MGP_LPJ_G0035227.1 mouse_genomes_project 9 112254539 112256754 - MGP_LPJ_P0094530 Camp protein_coding protein_coding MGP_LPJ_T0091242.1 MGP_LPJ_G0034387.1 mouse_genomes_project 9 19982970 20408070 + MGP_LPJ_P0091242 Bbs9 protein_coding protein_coding MGP_LPJ_T0091243.1 MGP_LPJ_G0034387.1 mouse_genomes_project 9 19982977 20408064 + MGP_LPJ_P0091243 Bbs9 protein_coding protein_coding MGP_LPJ_T0091244.1 MGP_LPJ_G0034387.1 mouse_genomes_project 9 19982986 20023263 + MGP_LPJ_P0091244 Bbs9 protein_coding protein_coding MGP_LPJ_T0091245.1 MGP_LPJ_G0034387.1 mouse_genomes_project 9 19982986 20408064 + MGP_LPJ_P0091245 Bbs9 protein_coding protein_coding MGP_LPJ_T0091246.1 MGP_LPJ_G0034387.1 mouse_genomes_project 9 19983122 20023309 + MGP_LPJ_P0091246 Bbs9 protein_coding protein_coding MGP_LPJ_T0091247.1 MGP_LPJ_G0034387.1 mouse_genomes_project 9 19999482 20408070 + MGP_LPJ_P0091247 Bbs9 protein_coding protein_coding MGP_LPJ_T0091248.1 MGP_LPJ_G0034387.1 mouse_genomes_project 9 20021666 20095074 + Bbs9 protein_coding processed_transcript MGP_LPJ_T0091249.1 MGP_LPJ_G0034387.1 mouse_genomes_project 9 20088892 20145865 + Bbs9 protein_coding processed_transcript MGP_LPJ_T0091250.1 MGP_LPJ_G0034387.1 mouse_genomes_project 9 20152517 20408070 + MGP_LPJ_P0091250 Bbs9 protein_coding protein_coding MGP_LPJ_T0091251.1 MGP_LPJ_G0034387.1 mouse_genomes_project 9 20160474 20408070 + MGP_LPJ_P0091251 Bbs9 protein_coding nonsense_mediated_decay MGP_LPJ_T0091252.1 MGP_LPJ_G0034387.1 mouse_genomes_project 9 20175631 20199403 + Bbs9 protein_coding retained_intron MGP_LPJ_T0091253.1 MGP_LPJ_G0034387.1 mouse_genomes_project 9 20197639 20408064 + Bbs9 protein_coding retained_intron MGP_LPJ_T0091142.1 MGP_LPJ_G0034344.1 mouse_genomes_project 9 18633420 18642502 + MGP_LPJ_P0091142 Atg4d protein_coding protein_coding MGP_LPJ_T0095110.1 MGP_LPJ_G0035375.1 mouse_genomes_project 9 127308694 127319132 - MGP_LPJ_P0095110 Xcr1 protein_coding protein_coding MGP_LPJ_T0091104.1 MGP_LPJ_G0034325.1 mouse_genomes_project 9 18162142 18169828 + MGP_LPJ_P0091104 Rdh8 protein_coding protein_coding MGP_LPJ_T0002422.1 MGP_LPJ_G0002329.1 mouse_genomes_project 9 87588793 87589265 - TEC TEC MGP_LPJ_T0002423.1 MGP_LPJ_G0002329.1 mouse_genomes_project 9 87588793 87588907 - TEC TEC MGP_LPJ_T0094666.1 MGP_LPJ_G0035244.1 mouse_genomes_project 9 113204730 113235043 + MGP_LPJ_P0094666 Myl3 protein_coding protein_coding MGP_LPJ_T0094667.1 MGP_LPJ_G0035244.1 mouse_genomes_project 9 113229568 113235338 + MGP_LPJ_P0094667 Myl3 protein_coding protein_coding MGP_LPJ_T0094668.1 MGP_LPJ_G0035244.1 mouse_genomes_project 9 113234324 113235687 + Myl3 protein_coding retained_intron MGP_LPJ_T0005550.1 MGP_LPJ_G0004684.1 mouse_genomes_project 9 108327643 108355475 - Gm29123 antisense antisense MGP_LPJ_T0009272.1 MGP_LPJ_G0007451.1 mouse_genomes_project 9 62657927 62662605 + Gm26609 lincRNA lincRNA MGP_LPJ_T0091660.1 MGP_LPJ_G0034568.1 mouse_genomes_project 9 39496185 39507859 - MGP_LPJ_P0091660 Crtam protein_coding protein_coding MGP_LPJ_T0091661.1 MGP_LPJ_G0034568.1 mouse_genomes_project 9 39496228 39527552 - MGP_LPJ_P0091661 Crtam protein_coding protein_coding MGP_LPJ_T0091662.1 MGP_LPJ_G0034568.1 mouse_genomes_project 9 39496230 39527552 - MGP_LPJ_P0091662 Crtam protein_coding protein_coding MGP_LPJ_T0091663.1 MGP_LPJ_G0034568.1 mouse_genomes_project 9 39496231 39527594 - MGP_LPJ_P0091663 Crtam protein_coding protein_coding MGP_LPJ_T0005454.1 MGP_LPJ_G0004621.1 mouse_genomes_project 9 35192757 35197679 + Gm3896 antisense antisense MGP_LPJ_T0011060.1 MGP_LPJ_G0009178.1 mouse_genomes_project 9 12397279 12397338 + Mir7650 miRNA miRNA MGP_LPJ_T0090841.1 MGP_LPJ_G0034218.1 mouse_genomes_project 9 4183733 4194557 + MGP_LPJ_P0090841 Mmp13 protein_coding protein_coding MGP_LPJ_T0094818.1 MGP_LPJ_G0035283.1 mouse_genomes_project 9 117557080 117582216 - MGP_LPJ_P0094818 Cmtm7 protein_coding protein_coding MGP_LPJ_T0094819.1 MGP_LPJ_G0035283.1 mouse_genomes_project 9 117557080 117582216 - MGP_LPJ_P0094819 Cmtm7 protein_coding protein_coding MGP_LPJ_T0018497.1 MGP_LPJ_G0015663.1 mouse_genomes_project 9 75375253 75380118 + Gm16551 processed_transcript lincRNA MGP_LPJ_T0018498.1 MGP_LPJ_G0015663.1 mouse_genomes_project 9 75375686 75387373 + Gm16551 processed_transcript lincRNA MGP_LPJ_T0018499.1 MGP_LPJ_G0015663.1 mouse_genomes_project 9 75375752 75376617 + Gm16551 processed_transcript retained_intron MGP_LPJ_T0018500.1 MGP_LPJ_G0015663.1 mouse_genomes_project 9 75375775 75380117 + Gm16551 processed_transcript lincRNA MGP_LPJ_T0018501.1 MGP_LPJ_G0015663.1 mouse_genomes_project 9 75376244 75378449 + Gm16551 processed_transcript retained_intron MGP_LPJ_T0091837.1 MGP_LPJ_G0034622.1 mouse_genomes_project 9 43877629 43890021 + MGP_LPJ_P0091837 Mpzl2 protein_coding protein_coding MGP_LPJ_T0009345.1 MGP_LPJ_G0007509.1 mouse_genomes_project 9 109676478 109679552 - Lsmem2 lincRNA lincRNA MGP_LPJ_T0005492.1 MGP_LPJ_G0004644.1 mouse_genomes_project 9 66983379 66984223 + Gm17098 antisense antisense MGP_LPJ_T0091685.1 MGP_LPJ_G0034574.1 mouse_genomes_project 9 41149590 41602555 - MGP_LPJ_P0091685 Grik4 protein_coding protein_coding MGP_LPJ_T0091686.1 MGP_LPJ_G0034574.1 mouse_genomes_project 9 41151768 41464184 - MGP_LPJ_P0091686 Grik4 protein_coding protein_coding MGP_LPJ_T0092345.1 MGP_LPJ_G0034786.1 mouse_genomes_project 9 57928381 57940423 - MGP_LPJ_P0092345 Tbc1d21 protein_coding protein_coding MGP_LPJ_T0011062.1 MGP_LPJ_G0009180.1 mouse_genomes_project 9 15349494 15349605 - Gm44498 miRNA miRNA MGP_LPJ_T0016091.1 MGP_LPJ_G0014182.1 mouse_genomes_project 9 99851950 99852527 + processed_pseudogene processed_pseudogene MGP_LPJ_T0091817.1 MGP_LPJ_G0034615.1 mouse_genomes_project 9 43628898 43632446 - MGP_LPJ_P0091817 Ttc36 protein_coding protein_coding MGP_LPJ_T0009233.1 MGP_LPJ_G0007420.1 mouse_genomes_project 9 30889351 30913605 - Gm27162 lincRNA lincRNA MGP_LPJ_T0095054.1 MGP_LPJ_G0035355.1 mouse_genomes_project 9 126231491 126240650 + MGP_LPJ_P0095054 Zkscan7 protein_coding unknown_likely_coding MGP_LPJ_T0091591.1 MGP_LPJ_G0034527.1 mouse_genomes_project 9 37629433 37630399 - MGP_LPJ_P0091591 Olfr948 protein_coding protein_coding MGP_LPJ_T0095093.1 MGP_LPJ_G0035372.1 mouse_genomes_project 9 127154716 127177682 - Lztfl1 protein_coding processed_transcript MGP_LPJ_T0095094.1 MGP_LPJ_G0035372.1 mouse_genomes_project 9 127157321 127177585 - MGP_LPJ_P0095094 Lztfl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0095095.1 MGP_LPJ_G0035372.1 mouse_genomes_project 9 127158665 127177585 - MGP_LPJ_P0095095 Lztfl1 protein_coding protein_coding MGP_LPJ_T0095096.1 MGP_LPJ_G0035372.1 mouse_genomes_project 9 127160696 127173094 - MGP_LPJ_P0095096 Lztfl1 protein_coding protein_coding MGP_LPJ_T0095097.1 MGP_LPJ_G0035372.1 mouse_genomes_project 9 127166681 127168688 - Lztfl1 protein_coding retained_intron MGP_LPJ_T0095098.1 MGP_LPJ_G0035372.1 mouse_genomes_project 9 127168427 127177610 - Lztfl1 protein_coding processed_transcript MGP_LPJ_T0095099.1 MGP_LPJ_G0035372.1 mouse_genomes_project 9 127172947 127177604 - Lztfl1 protein_coding processed_transcript MGP_LPJ_T0095100.1 MGP_LPJ_G0035372.1 mouse_genomes_project 9 127172951 127177606 - Lztfl1 protein_coding processed_transcript MGP_LPJ_T0095101.1 MGP_LPJ_G0035372.1 mouse_genomes_project 9 127175352 127177639 - Lztfl1 protein_coding retained_intron MGP_LPJ_T0091024.1 MGP_LPJ_G0034284.1 mouse_genomes_project 9 16232109 16233048 + MGP_LPJ_P0091024 Olfr832 protein_coding protein_coding MGP_LPJ_T0002471.1 MGP_LPJ_G0002377.1 mouse_genomes_project 9 105377357 105379499 - TEC TEC MGP_LPJ_T0092557.1 MGP_LPJ_G0034839.1 mouse_genomes_project 9 64681571 64704477 - MGP_LPJ_P0092557 Rab11a protein_coding protein_coding MGP_LPJ_T0092558.1 MGP_LPJ_G0034839.1 mouse_genomes_project 9 64681673 64690789 - Rab11a protein_coding retained_intron MGP_LPJ_T0092559.1 MGP_LPJ_G0034839.1 mouse_genomes_project 9 64681774 64691779 - MGP_LPJ_P0092559 Rab11a protein_coding protein_coding MGP_LPJ_T0092560.1 MGP_LPJ_G0034839.1 mouse_genomes_project 9 64681838 64691522 - Rab11a protein_coding processed_transcript MGP_LPJ_T0092561.1 MGP_LPJ_G0034839.1 mouse_genomes_project 9 64681917 64704358 - MGP_LPJ_P0092561 Rab11a protein_coding protein_coding MGP_LPJ_T0092562.1 MGP_LPJ_G0034839.1 mouse_genomes_project 9 64682011 64704358 - MGP_LPJ_P0092562 Rab11a protein_coding protein_coding MGP_LPJ_T0092563.1 MGP_LPJ_G0034839.1 mouse_genomes_project 9 64682021 64704487 - MGP_LPJ_P0092563 Rab11a protein_coding protein_coding MGP_LPJ_T0092564.1 MGP_LPJ_G0034839.1 mouse_genomes_project 9 64691759 64703246 - Rab11a protein_coding processed_transcript MGP_LPJ_T0092083.1 MGP_LPJ_G0034700.1 mouse_genomes_project 9 51416268 51474068 - MGP_LPJ_P0092083 Zc3h12c protein_coding protein_coding MGP_LPJ_T0092084.1 MGP_LPJ_G0034700.1 mouse_genomes_project 9 51419686 51474482 - MGP_LPJ_P0092084 Zc3h12c protein_coding unknown_likely_coding MGP_LPJ_T0094595.1 MGP_LPJ_G0035233.1 mouse_genomes_project 9 112741680 112758221 + MGP_LPJ_P0094595 Elp6 protein_coding protein_coding MGP_LPJ_T0094596.1 MGP_LPJ_G0035233.1 mouse_genomes_project 9 112741711 112759000 + MGP_LPJ_P0094596 Elp6 protein_coding protein_coding MGP_LPJ_T0094597.1 MGP_LPJ_G0035233.1 mouse_genomes_project 9 112741747 112756470 + MGP_LPJ_P0094597 Elp6 protein_coding nonsense_mediated_decay MGP_LPJ_T0094598.1 MGP_LPJ_G0035233.1 mouse_genomes_project 9 112742003 112752802 + MGP_LPJ_P0094598 Elp6 protein_coding protein_coding MGP_LPJ_T0094599.1 MGP_LPJ_G0035233.1 mouse_genomes_project 9 112746695 112751022 + Elp6 protein_coding retained_intron MGP_LPJ_T0018541.1 MGP_LPJ_G0015680.1 mouse_genomes_project 9 113473938 113494940 + Gm10030 processed_transcript antisense MGP_LPJ_T0018542.1 MGP_LPJ_G0015680.1 mouse_genomes_project 9 113487284 113493436 + Gm10030 processed_transcript retained_intron MGP_LPJ_T0018543.1 MGP_LPJ_G0015680.1 mouse_genomes_project 9 113491721 113493741 + Gm10030 processed_transcript processed_transcript MGP_LPJ_T0091887.1 MGP_LPJ_G0034639.1 mouse_genomes_project 9 44851567 44858000 - MGP_LPJ_P0091887 Tagln protein_coding protein_coding MGP_LPJ_T0098687.1 MGP_LPJ_G0036955.1 mouse_genomes_project 9 55665137 55666612 - Gm29322 sense_intronic sense_intronic MGP_LPJ_T0093043.1 MGP_LPJ_G0034956.1 mouse_genomes_project 9 79001219 79014798 + MGP_LPJ_P0093043 protein_coding protein_coding MGP_LPJ_T0093045.1 MGP_LPJ_G0034956.1 mouse_genomes_project 9 79007898 79014703 + protein_coding retained_intron MGP_LPJ_T0091695.1 MGP_LPJ_G0034581.1 mouse_genomes_project 9 42471181 42536810 + MGP_LPJ_P0091695 Nectin1 protein_coding protein_coding MGP_LPJ_T0093842.1 MGP_LPJ_G0035118.1 mouse_genomes_project 9 108468986 108477525 - MGP_LPJ_P0093842 Abhd14a protein_coding protein_coding MGP_LPJ_T0093843.1 MGP_LPJ_G0035118.1 mouse_genomes_project 9 108468989 108477525 - MGP_LPJ_P0093843 Abhd14a protein_coding protein_coding MGP_LPJ_T0093844.1 MGP_LPJ_G0035118.1 mouse_genomes_project 9 108468991 108477410 - MGP_LPJ_P0093844 Abhd14a protein_coding protein_coding MGP_LPJ_T0093845.1 MGP_LPJ_G0035118.1 mouse_genomes_project 9 108469045 108477290 - MGP_LPJ_P0093845 Abhd14a protein_coding protein_coding MGP_LPJ_T0093846.1 MGP_LPJ_G0035118.1 mouse_genomes_project 9 108469317 108474839 - MGP_LPJ_P0093846 Abhd14a protein_coding protein_coding MGP_LPJ_T0093847.1 MGP_LPJ_G0035118.1 mouse_genomes_project 9 108470752 108477467 - MGP_LPJ_P0093847 Abhd14a protein_coding protein_coding MGP_LPJ_T0093848.1 MGP_LPJ_G0035118.1 mouse_genomes_project 9 108470832 108477364 - MGP_LPJ_P0093848 Abhd14a protein_coding protein_coding MGP_LPJ_T0093849.1 MGP_LPJ_G0035118.1 mouse_genomes_project 9 108473426 108474144 - Abhd14a protein_coding retained_intron MGP_LPJ_T0094669.1 MGP_LPJ_G0035245.1 mouse_genomes_project 9 113266699 113272294 + MGP_LPJ_P0094669 Prss42 protein_coding protein_coding MGP_LPJ_T0092489.1 MGP_LPJ_G0034822.1 mouse_genomes_project 9 62733792 62843251 - MGP_LPJ_P0092489 Pias1 protein_coding protein_coding MGP_LPJ_T0011101.1 MGP_LPJ_G0009219.1 mouse_genomes_project 9 72879607 72879733 - Gm28010 miRNA miRNA MGP_LPJ_T0005516.1 MGP_LPJ_G0004662.1 mouse_genomes_project 9 96045972 96052589 - Gm16262 antisense antisense MGP_LPJ_T0002435.1 MGP_LPJ_G0002341.1 mouse_genomes_project 9 92491745 92494223 - TEC TEC MGP_LPJ_T0002434.1 MGP_LPJ_G0002340.1 mouse_genomes_project 9 92346040 92348850 - TEC TEC MGP_LPJ_T0016070.1 MGP_LPJ_G0014161.1 mouse_genomes_project 9 92445721 92446163 + processed_pseudogene processed_pseudogene MGP_LPJ_T0091018.1 MGP_LPJ_G0034278.1 mouse_genomes_project 9 15751366 15763308 - MGP_LPJ_P0091018 protein_coding protein_coding MGP_LPJ_T0093020.1 MGP_LPJ_G0034948.1 mouse_genomes_project 9 78313837 78339535 + MGP_LPJ_P0093020 Klhl31 protein_coding protein_coding MGP_LPJ_T0094405.1 MGP_LPJ_G0035202.1 mouse_genomes_project 9 111006012 111032622 + MGP_LPJ_P0094405 Celsr3 protein_coding protein_coding MGP_LPJ_T0094406.1 MGP_LPJ_G0035202.1 mouse_genomes_project 9 111006810 111032629 + MGP_LPJ_P0094406 Celsr3 protein_coding unknown_likely_coding MGP_LPJ_T0094407.1 MGP_LPJ_G0035202.1 mouse_genomes_project 9 111011432 111012513 + MGP_LPJ_P0094407 Celsr3 protein_coding protein_coding MGP_LPJ_T0094408.1 MGP_LPJ_G0035202.1 mouse_genomes_project 9 111014164 111016266 + Celsr3 protein_coding retained_intron MGP_LPJ_T0094409.1 MGP_LPJ_G0035202.1 mouse_genomes_project 9 111022287 111022904 + Celsr3 protein_coding retained_intron MGP_LPJ_T0094410.1 MGP_LPJ_G0035202.1 mouse_genomes_project 9 111022913 111023599 + Celsr3 protein_coding retained_intron MGP_LPJ_T0094411.1 MGP_LPJ_G0035202.1 mouse_genomes_project 9 111022931 111028413 + MGP_LPJ_P0094411 Celsr3 protein_coding protein_coding MGP_LPJ_T0092641.1 MGP_LPJ_G0034868.1 mouse_genomes_project 9 66140434 66181131 - MGP_LPJ_P0092641 Snx1 protein_coding protein_coding MGP_LPJ_T0092642.1 MGP_LPJ_G0034868.1 mouse_genomes_project 9 66141425 66143650 - Snx1 protein_coding retained_intron MGP_LPJ_T0092643.1 MGP_LPJ_G0034868.1 mouse_genomes_project 9 66146489 66148878 - Snx1 protein_coding retained_intron MGP_LPJ_T0092644.1 MGP_LPJ_G0034868.1 mouse_genomes_project 9 66148845 66154121 - Snx1 protein_coding retained_intron MGP_LPJ_T0092645.1 MGP_LPJ_G0034868.1 mouse_genomes_project 9 66149692 66182836 - MGP_LPJ_P0092645 Snx1 protein_coding protein_coding MGP_LPJ_T0092646.1 MGP_LPJ_G0034868.1 mouse_genomes_project 9 66156915 66158169 - Snx1 protein_coding retained_intron MGP_LPJ_T0092647.1 MGP_LPJ_G0034868.1 mouse_genomes_project 9 66161590 66181042 - Snx1 protein_coding retained_intron MGP_LPJ_T0091610.1 MGP_LPJ_G0034540.1 mouse_genomes_project 9 38155415 38156348 + MGP_LPJ_P0091610 Olfr967 protein_coding protein_coding MGP_LPJ_T0090812.1 MGP_LPJ_G0034209.1 mouse_genomes_project 9 1145389 1148715 + MGP_LPJ_P0090812 Msantd4 protein_coding protein_coding MGP_LPJ_T0095111.1 MGP_LPJ_G0035376.1 mouse_genomes_project 9 127431650 127439101 - MGP_LPJ_P0095111 Ccr1 protein_coding protein_coding MGP_LPJ_T0091915.1 MGP_LPJ_G0034645.1 mouse_genomes_project 9 45189269 45192021 + MGP_LPJ_P0091915 Apoa4 protein_coding protein_coding MGP_LPJ_T0094019.1 MGP_LPJ_G0035150.1 mouse_genomes_project 9 109662497 109669544 + MGP_LPJ_P0094019 Hyal3 protein_coding protein_coding MGP_LPJ_T0094020.1 MGP_LPJ_G0035150.1 mouse_genomes_project 9 109662972 109669935 + MGP_LPJ_P0094020 Hyal3 protein_coding protein_coding MGP_LPJ_T0094021.1 MGP_LPJ_G0035150.1 mouse_genomes_project 9 109666421 109669373 + MGP_LPJ_P0094021 Hyal3 protein_coding protein_coding MGP_LPJ_T0018466.1 MGP_LPJ_G0015654.1 mouse_genomes_project 9 39929181 40160313 + processed_transcript lincRNA MGP_LPJ_T0018467.1 MGP_LPJ_G0015654.1 mouse_genomes_project 9 39929310 40046791 + processed_transcript lincRNA MGP_LPJ_T0018468.1 MGP_LPJ_G0015654.1 mouse_genomes_project 9 39929345 39988864 + processed_transcript lincRNA MGP_LPJ_T0018469.1 MGP_LPJ_G0015654.1 mouse_genomes_project 9 40033249 40160770 + processed_transcript lincRNA MGP_LPJ_T0018470.1 MGP_LPJ_G0015654.1 mouse_genomes_project 9 40033357 40192233 + processed_transcript lincRNA MGP_LPJ_T0018471.1 MGP_LPJ_G0015654.1 mouse_genomes_project 9 40146106 40163122 + processed_transcript lincRNA MGP_LPJ_T0018472.1 MGP_LPJ_G0015654.1 mouse_genomes_project 9 40146587 40163125 + processed_transcript lincRNA MGP_LPJ_T0018473.1 MGP_LPJ_G0015654.1 mouse_genomes_project 9 40147339 40163123 + processed_transcript processed_transcript MGP_LPJ_T0018474.1 MGP_LPJ_G0015654.1 mouse_genomes_project 9 40151670 40189813 + processed_transcript lincRNA MGP_LPJ_T0018475.1 MGP_LPJ_G0015654.1 mouse_genomes_project 9 40151684 40192037 + processed_transcript lincRNA MGP_LPJ_T0018476.1 MGP_LPJ_G0015654.1 mouse_genomes_project 9 40151756 40162782 + processed_transcript lincRNA MGP_LPJ_T0018477.1 MGP_LPJ_G0015654.1 mouse_genomes_project 9 40158789 40163033 + processed_transcript retained_intron MGP_LPJ_T0018478.1 MGP_LPJ_G0015654.1 mouse_genomes_project 9 40173821 40189779 + processed_transcript lincRNA MGP_LPJ_T0018479.1 MGP_LPJ_G0015654.1 mouse_genomes_project 9 40191284 40194818 + processed_transcript retained_intron MGP_LPJ_T0091502.1 MGP_LPJ_G0034462.1 mouse_genomes_project 9 35578270 35590657 + Robo4 protein_coding retained_intron MGP_LPJ_T0091503.1 MGP_LPJ_G0034462.1 mouse_genomes_project 9 35578270 35590661 + MGP_LPJ_P0091503 Robo4 protein_coding protein_coding MGP_LPJ_T0091504.1 MGP_LPJ_G0034462.1 mouse_genomes_project 9 35578406 35590659 + MGP_LPJ_P0091504 Robo4 protein_coding protein_coding MGP_LPJ_T0091505.1 MGP_LPJ_G0034462.1 mouse_genomes_project 9 35578419 35590660 + MGP_LPJ_P0091505 Robo4 protein_coding protein_coding MGP_LPJ_T0099858.1 MGP_LPJ_G0038121.1 mouse_genomes_project 9 97352209 97352387 + Gm24004 snRNA snRNA MGP_LPJ_T0092964.1 MGP_LPJ_G0034932.1 mouse_genomes_project 9 75902205 75906085 + MGP_LPJ_P0092964 Bcl2l10 protein_coding protein_coding MGP_LPJ_T0016110.1 MGP_LPJ_G0014201.1 mouse_genomes_project 9 106211527 106212242 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011055.1 MGP_LPJ_G0009173.1 mouse_genomes_project 9 4705049 4705100 + Mir5618 miRNA miRNA MGP_LPJ_T0092221.1 MGP_LPJ_G0034749.1 mouse_genomes_project 9 56310540 56345333 + MGP_LPJ_P0092221 Cspg4 protein_coding protein_coding MGP_LPJ_T0101103.1 MGP_LPJ_G0039366.1 mouse_genomes_project 9 60120601 60120724 + Gm22099 snoRNA snoRNA MGP_LPJ_T0090966.1 MGP_LPJ_G0034259.1 mouse_genomes_project 9 12124962 12184692 - MGP_LPJ_P0090966 Hephl1 protein_coding protein_coding MGP_LPJ_T0002439.1 MGP_LPJ_G0002345.1 mouse_genomes_project 9 92610180 92611060 - TEC TEC MGP_LPJ_T0101086.1 MGP_LPJ_G0039349.1 mouse_genomes_project 9 22550102 22550236 + Gm23893 snoRNA snoRNA MGP_LPJ_T0009230.1 MGP_LPJ_G0007417.1 mouse_genomes_project 9 24861949 24862383 - Gm29172 lincRNA lincRNA MGP_LPJ_T0101129.1 MGP_LPJ_G0039392.1 mouse_genomes_project 9 101577571 101577705 + Gm23594 snoRNA snoRNA MGP_LPJ_T0091028.1 MGP_LPJ_G0034288.1 mouse_genomes_project 9 16541739 16542846 - MGP_LPJ_P0091028 Olfr843 protein_coding protein_coding MGP_LPJ_T0091573.1 MGP_LPJ_G0034509.1 mouse_genomes_project 9 37012088 37016156 + MGP_LPJ_P0091573 Olfr920 protein_coding protein_coding MGP_LPJ_T0092995.1 MGP_LPJ_G0034946.1 mouse_genomes_project 9 77749385 77787643 - protein_coding retained_intron MGP_LPJ_T0092996.1 MGP_LPJ_G0034946.1 mouse_genomes_project 9 77749385 78009767 - MGP_LPJ_P0092996 protein_coding protein_coding MGP_LPJ_T0092997.1 MGP_LPJ_G0034946.1 mouse_genomes_project 9 77749385 78009760 - MGP_LPJ_P0092997 protein_coding protein_coding MGP_LPJ_T0092998.1 MGP_LPJ_G0034946.1 mouse_genomes_project 9 77749390 78009698 - MGP_LPJ_P0092998 protein_coding protein_coding MGP_LPJ_T0092999.1 MGP_LPJ_G0034946.1 mouse_genomes_project 9 77749390 78009690 - MGP_LPJ_P0092999 protein_coding protein_coding MGP_LPJ_T0093000.1 MGP_LPJ_G0034946.1 mouse_genomes_project 9 77749393 77914106 - MGP_LPJ_P0093000 protein_coding protein_coding MGP_LPJ_T0093001.1 MGP_LPJ_G0034946.1 mouse_genomes_project 9 77749393 78009813 - MGP_LPJ_P0093001 protein_coding protein_coding MGP_LPJ_T0093002.1 MGP_LPJ_G0034946.1 mouse_genomes_project 9 77749416 77787392 - MGP_LPJ_P0093002 protein_coding protein_coding MGP_LPJ_T0093003.1 MGP_LPJ_G0034946.1 mouse_genomes_project 9 77749614 77914152 - MGP_LPJ_P0093003 protein_coding protein_coding MGP_LPJ_T0093004.1 MGP_LPJ_G0034946.1 mouse_genomes_project 9 77749695 77914068 - MGP_LPJ_P0093004 protein_coding unknown_likely_coding MGP_LPJ_T0093005.1 MGP_LPJ_G0034946.1 mouse_genomes_project 9 77814867 78009758 - MGP_LPJ_P0093005 protein_coding protein_coding MGP_LPJ_T0093006.1 MGP_LPJ_G0034946.1 mouse_genomes_project 9 77890437 78009748 - MGP_LPJ_P0093006 protein_coding protein_coding MGP_LPJ_T0093007.1 MGP_LPJ_G0034946.1 mouse_genomes_project 9 77890440 77914115 - MGP_LPJ_P0093007 protein_coding protein_coding MGP_LPJ_T0093008.1 MGP_LPJ_G0034946.1 mouse_genomes_project 9 77890468 78002496 - MGP_LPJ_P0093008 protein_coding protein_coding MGP_LPJ_T0093009.1 MGP_LPJ_G0034946.1 mouse_genomes_project 9 77911453 77914387 - protein_coding retained_intron MGP_LPJ_T0093010.1 MGP_LPJ_G0034946.1 mouse_genomes_project 9 78008314 78016115 - protein_coding processed_transcript MGP_LPJ_T0094172.1 MGP_LPJ_G0035168.1 mouse_genomes_project 9 110107094 110160916 + Gm20662 protein_coding retained_intron MGP_LPJ_T0094177.1 MGP_LPJ_G0035168.1 mouse_genomes_project 9 110108734 110144835 + MGP_LPJ_P0094177 Gm20662 protein_coding nonsense_mediated_decay MGP_LPJ_T0094178.1 MGP_LPJ_G0035168.1 mouse_genomes_project 9 110108772 110144827 + MGP_LPJ_P0094178 Gm20662 protein_coding nonsense_mediated_decay MGP_LPJ_T0009234.1 MGP_LPJ_G0007421.1 mouse_genomes_project 9 31010740 31065557 + lincRNA lincRNA MGP_LPJ_T0011762.1 MGP_LPJ_G0009880.1 mouse_genomes_project 9 113748840 113749116 - Gm24860 misc_RNA misc_RNA MGP_LPJ_T0098332.1 MGP_LPJ_G0036613.1 mouse_genomes_project 9 63973848 63973943 + Gm25606 rRNA rRNA MGP_LPJ_T0094821.1 MGP_LPJ_G0035285.1 mouse_genomes_project 9 117713421 117751942 - MGP_LPJ_P0094821 Gpd1l protein_coding protein_coding MGP_LPJ_T0094822.1 MGP_LPJ_G0035285.1 mouse_genomes_project 9 117717422 117751831 - MGP_LPJ_P0094822 Gpd1l protein_coding protein_coding MGP_LPJ_T0094823.1 MGP_LPJ_G0035285.1 mouse_genomes_project 9 117725794 117737170 - Gpd1l protein_coding processed_transcript MGP_LPJ_T0011071.1 MGP_LPJ_G0009189.1 mouse_genomes_project 9 25994862 25994959 + Gm44316 miRNA miRNA MGP_LPJ_T0094739.1 MGP_LPJ_G0035261.1 mouse_genomes_project 9 113774806 113781962 + MGP_LPJ_P0094739 Epm2aip1 protein_coding protein_coding MGP_LPJ_T0094740.1 MGP_LPJ_G0035261.1 mouse_genomes_project 9 113774822 113781966 + MGP_LPJ_P0094740 Epm2aip1 protein_coding protein_coding MGP_LPJ_T0094741.1 MGP_LPJ_G0035261.1 mouse_genomes_project 9 113776979 113780406 + Epm2aip1 protein_coding processed_transcript MGP_LPJ_T0016113.1 MGP_LPJ_G0014204.1 mouse_genomes_project 9 109102598 109103801 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009336.1 MGP_LPJ_G0007502.1 mouse_genomes_project 9 104473249 104474200 + 4930533D04Rik lincRNA lincRNA MGP_LPJ_T0094797.1 MGP_LPJ_G0035270.1 mouse_genomes_project 9 116611875 116662870 + MGP_LPJ_P0094797 Ubp1 protein_coding protein_coding MGP_LPJ_T0094798.1 MGP_LPJ_G0035270.1 mouse_genomes_project 9 116611875 116662870 + MGP_LPJ_P0094798 Ubp1 protein_coding protein_coding MGP_LPJ_T0094799.1 MGP_LPJ_G0035270.1 mouse_genomes_project 9 116612395 116661069 + MGP_LPJ_P0094799 Ubp1 protein_coding protein_coding MGP_LPJ_T0091589.1 MGP_LPJ_G0034525.1 mouse_genomes_project 9 37547513 37548458 - MGP_LPJ_P0091589 Olfr1537 protein_coding protein_coding MGP_LPJ_T0016011.1 MGP_LPJ_G0014102.1 mouse_genomes_project 9 71197831 71198622 + processed_pseudogene processed_pseudogene MGP_LPJ_T0094860.1 MGP_LPJ_G0035294.1 mouse_genomes_project 9 121505787 121512935 + MGP_LPJ_P0094860 Eomes protein_coding protein_coding MGP_LPJ_T0094861.1 MGP_LPJ_G0035294.1 mouse_genomes_project 9 121505919 121513701 + MGP_LPJ_P0094861 Eomes protein_coding protein_coding MGP_LPJ_T0094862.1 MGP_LPJ_G0035294.1 mouse_genomes_project 9 121506432 121510329 + MGP_LPJ_P0094862 Eomes protein_coding protein_coding MGP_LPJ_T0091595.1 MGP_LPJ_G0034531.1 mouse_genomes_project 9 37869827 37871686 - MGP_LPJ_P0091595 Olfr957 protein_coding protein_coding MGP_LPJ_T0094453.1 MGP_LPJ_G0035209.1 mouse_genomes_project 9 111179632 111200250 + MGP_LPJ_P0094453 Shisa5 protein_coding protein_coding MGP_LPJ_T0094454.1 MGP_LPJ_G0035209.1 mouse_genomes_project 9 111179652 111200197 + MGP_LPJ_P0094454 Shisa5 protein_coding protein_coding MGP_LPJ_T0094455.1 MGP_LPJ_G0035209.1 mouse_genomes_project 9 111179669 111200197 + Shisa5 protein_coding retained_intron MGP_LPJ_T0094456.1 MGP_LPJ_G0035209.1 mouse_genomes_project 9 111181483 111199216 + MGP_LPJ_P0094456 Shisa5 protein_coding protein_coding MGP_LPJ_T0094457.1 MGP_LPJ_G0035209.1 mouse_genomes_project 9 111181673 111193876 + MGP_LPJ_P0094457 Shisa5 protein_coding protein_coding MGP_LPJ_T0094458.1 MGP_LPJ_G0035209.1 mouse_genomes_project 9 111193581 111199428 + MGP_LPJ_P0094458 Shisa5 protein_coding protein_coding MGP_LPJ_T0094459.1 MGP_LPJ_G0035209.1 mouse_genomes_project 9 111193640 111198851 + MGP_LPJ_P0094459 Shisa5 protein_coding protein_coding MGP_LPJ_T0094460.1 MGP_LPJ_G0035209.1 mouse_genomes_project 9 111193644 111199497 + MGP_LPJ_P0094460 Shisa5 protein_coding protein_coding MGP_LPJ_T0094461.1 MGP_LPJ_G0035209.1 mouse_genomes_project 9 111193665 111198825 + MGP_LPJ_P0094461 Shisa5 protein_coding protein_coding MGP_LPJ_T0094462.1 MGP_LPJ_G0035209.1 mouse_genomes_project 9 111193683 111199486 + MGP_LPJ_P0094462 Shisa5 protein_coding protein_coding MGP_LPJ_T0094463.1 MGP_LPJ_G0035209.1 mouse_genomes_project 9 111193685 111198884 + MGP_LPJ_P0094463 Shisa5 protein_coding protein_coding MGP_LPJ_T0094464.1 MGP_LPJ_G0035209.1 mouse_genomes_project 9 111193687 111199204 + MGP_LPJ_P0094464 Shisa5 protein_coding protein_coding MGP_LPJ_T0094465.1 MGP_LPJ_G0035209.1 mouse_genomes_project 9 111193696 111198847 + MGP_LPJ_P0094465 Shisa5 protein_coding protein_coding MGP_LPJ_T0094466.1 MGP_LPJ_G0035209.1 mouse_genomes_project 9 111193920 111199331 + MGP_LPJ_P0094466 Shisa5 protein_coding protein_coding MGP_LPJ_T0094467.1 MGP_LPJ_G0035209.1 mouse_genomes_project 9 111195339 111199175 + Shisa5 protein_coding processed_transcript MGP_LPJ_T0094468.1 MGP_LPJ_G0035209.1 mouse_genomes_project 9 111197348 111199680 + MGP_LPJ_P0094468 Shisa5 protein_coding protein_coding MGP_LPJ_T0094469.1 MGP_LPJ_G0035209.1 mouse_genomes_project 9 111197433 111199024 + Shisa5 protein_coding processed_transcript MGP_LPJ_T0094470.1 MGP_LPJ_G0035209.1 mouse_genomes_project 9 111197497 111198964 + Shisa5 protein_coding processed_transcript MGP_LPJ_T0094471.1 MGP_LPJ_G0035209.1 mouse_genomes_project 9 111198412 111198948 + Shisa5 protein_coding retained_intron MGP_LPJ_T0094162.1 MGP_LPJ_G0035167.1 mouse_genomes_project 9 110103242 110110414 + MGP_LPJ_P0094162 Cdhr4 protein_coding protein_coding MGP_LPJ_T0094163.1 MGP_LPJ_G0035167.1 mouse_genomes_project 9 110106435 110108808 + MGP_LPJ_P0094163 Cdhr4 protein_coding nonsense_mediated_decay MGP_LPJ_T0094164.1 MGP_LPJ_G0035167.1 mouse_genomes_project 9 110106471 110107320 + Cdhr4 protein_coding retained_intron MGP_LPJ_T0094165.1 MGP_LPJ_G0035167.1 mouse_genomes_project 9 110106477 110110402 + Cdhr4 protein_coding retained_intron MGP_LPJ_T0094166.1 MGP_LPJ_G0035167.1 mouse_genomes_project 9 110106501 110107104 + Cdhr4 protein_coding retained_intron MGP_LPJ_T0094167.1 MGP_LPJ_G0035167.1 mouse_genomes_project 9 110106508 110110405 + Cdhr4 protein_coding retained_intron MGP_LPJ_T0094168.1 MGP_LPJ_G0035167.1 mouse_genomes_project 9 110106528 110107676 + Cdhr4 protein_coding retained_intron MGP_LPJ_T0094169.1 MGP_LPJ_G0035167.1 mouse_genomes_project 9 110106651 110108408 + Cdhr4 protein_coding processed_transcript MGP_LPJ_T0094170.1 MGP_LPJ_G0035167.1 mouse_genomes_project 9 110106689 110110414 + MGP_LPJ_P0094170 Cdhr4 protein_coding protein_coding MGP_LPJ_T0094171.1 MGP_LPJ_G0035167.1 mouse_genomes_project 9 110106743 110107903 + Cdhr4 protein_coding retained_intron MGP_LPJ_T0094173.1 MGP_LPJ_G0035167.1 mouse_genomes_project 9 110107361 110110409 + MGP_LPJ_P0094173 Cdhr4 protein_coding protein_coding MGP_LPJ_T0094174.1 MGP_LPJ_G0035167.1 mouse_genomes_project 9 110108117 110110410 + MGP_LPJ_P0094174 Cdhr4 protein_coding protein_coding MGP_LPJ_T0094175.1 MGP_LPJ_G0035167.1 mouse_genomes_project 9 110108338 110110407 + MGP_LPJ_P0094175 Cdhr4 protein_coding protein_coding MGP_LPJ_T0094176.1 MGP_LPJ_G0035167.1 mouse_genomes_project 9 110108423 110110409 + MGP_LPJ_P0094176 Cdhr4 protein_coding protein_coding MGP_LPJ_T0016068.1 MGP_LPJ_G0014159.1 mouse_genomes_project 9 91932168 91932331 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091324.1 MGP_LPJ_G0034410.1 mouse_genomes_project 9 28237241 28277867 + MGP_LPJ_P0091324 Snx19 protein_coding protein_coding MGP_LPJ_T0094849.1 MGP_LPJ_G0035292.1 mouse_genomes_project 9 121039349 121066742 + MGP_LPJ_P0094849 Azi2 protein_coding protein_coding MGP_LPJ_T0094850.1 MGP_LPJ_G0035292.1 mouse_genomes_project 9 121039407 121066058 + MGP_LPJ_P0094850 Azi2 protein_coding protein_coding MGP_LPJ_T0094851.1 MGP_LPJ_G0035292.1 mouse_genomes_project 9 121039429 121063813 + MGP_LPJ_P0094851 Azi2 protein_coding protein_coding MGP_LPJ_T0094852.1 MGP_LPJ_G0035292.1 mouse_genomes_project 9 121039466 121072682 + MGP_LPJ_P0094852 Azi2 protein_coding nonsense_mediated_decay MGP_LPJ_T0094853.1 MGP_LPJ_G0035292.1 mouse_genomes_project 9 121039537 121051112 + Azi2 protein_coding retained_intron MGP_LPJ_T0094854.1 MGP_LPJ_G0035292.1 mouse_genomes_project 9 121050206 121065808 + MGP_LPJ_P0094854 Azi2 protein_coding protein_coding MGP_LPJ_T0094855.1 MGP_LPJ_G0035292.1 mouse_genomes_project 9 121050267 121052983 + Azi2 protein_coding retained_intron MGP_LPJ_T0094856.1 MGP_LPJ_G0035292.1 mouse_genomes_project 9 121052210 121065203 + MGP_LPJ_P0094856 Azi2 protein_coding protein_coding MGP_LPJ_T0094857.1 MGP_LPJ_G0035292.1 mouse_genomes_project 9 121056804 121065105 + Azi2 protein_coding retained_intron MGP_LPJ_T0094858.1 MGP_LPJ_G0035292.1 mouse_genomes_project 9 121060861 121065579 + MGP_LPJ_P0094858 Azi2 protein_coding protein_coding MGP_LPJ_T0016027.1 MGP_LPJ_G0014118.1 mouse_genomes_project 9 75212576 75212883 + processed_pseudogene processed_pseudogene MGP_LPJ_T0092118.1 MGP_LPJ_G0034715.1 mouse_genomes_project 9 53370681 53418677 - MGP_LPJ_P0092118 Tnfaip8l3 protein_coding protein_coding MGP_LPJ_T0005459.1 MGP_LPJ_G0004625.1 mouse_genomes_project 9 44017635 44019799 + Gm17099 antisense antisense MGP_LPJ_T0091150.1 MGP_LPJ_G0034347.1 mouse_genomes_project 9 18664625 18684840 - MGP_LPJ_P0091150 Ap1m2 protein_coding protein_coding MGP_LPJ_T0091151.1 MGP_LPJ_G0034347.1 mouse_genomes_project 9 18664625 18684840 - MGP_LPJ_P0091151 Ap1m2 protein_coding protein_coding MGP_LPJ_T0091968.1 MGP_LPJ_G0034665.1 mouse_genomes_project 9 48465869 48476081 + MGP_LPJ_P0091968 Gm4894 protein_coding protein_coding MGP_LPJ_T0005472.1 MGP_LPJ_G0004632.1 mouse_genomes_project 9 53001675 53015723 + Gm16124 antisense antisense MGP_LPJ_T0091629.1 MGP_LPJ_G0034559.1 mouse_genomes_project 9 38668098 38669114 + MGP_LPJ_P0091629 Olfr986 protein_coding protein_coding MGP_LPJ_T0093283.1 MGP_LPJ_G0035007.1 mouse_genomes_project 9 89846639 89874924 - Mthfs protein_coding processed_transcript MGP_LPJ_T0093284.1 MGP_LPJ_G0035007.1 mouse_genomes_project 9 89862138 89870795 - Mthfs protein_coding retained_intron MGP_LPJ_T0093285.1 MGP_LPJ_G0035007.1 mouse_genomes_project 9 89870046 89874443 - MGP_LPJ_P0093285 Mthfs protein_coding protein_coding MGP_LPJ_T0092302.1 MGP_LPJ_G0034779.1 mouse_genomes_project 9 57577538 57671571 - MGP_LPJ_P0092302 Ccdc33 protein_coding unknown_likely_coding MGP_LPJ_T0092303.1 MGP_LPJ_G0034779.1 mouse_genomes_project 9 57577545 57654027 - MGP_LPJ_P0092303 Ccdc33 protein_coding protein_coding MGP_LPJ_T0092304.1 MGP_LPJ_G0034779.1 mouse_genomes_project 9 57577546 57671650 - MGP_LPJ_P0092304 Ccdc33 protein_coding protein_coding MGP_LPJ_T0092305.1 MGP_LPJ_G0034779.1 mouse_genomes_project 9 57577550 57653955 - MGP_LPJ_P0092305 Ccdc33 protein_coding protein_coding MGP_LPJ_T0092306.1 MGP_LPJ_G0034779.1 mouse_genomes_project 9 57577587 57579845 - Ccdc33 protein_coding retained_intron MGP_LPJ_T0092307.1 MGP_LPJ_G0034779.1 mouse_genomes_project 9 57582100 57592172 - Ccdc33 protein_coding processed_transcript MGP_LPJ_T0092309.1 MGP_LPJ_G0034779.1 mouse_genomes_project 9 57619213 57667187 - Ccdc33 protein_coding processed_transcript MGP_LPJ_T0092310.1 MGP_LPJ_G0034779.1 mouse_genomes_project 9 57628729 57633786 - Ccdc33 protein_coding retained_intron MGP_LPJ_T0092313.1 MGP_LPJ_G0034779.1 mouse_genomes_project 9 57638055 57654027 - Ccdc33 protein_coding retained_intron MGP_LPJ_T0092314.1 MGP_LPJ_G0034779.1 mouse_genomes_project 9 57663497 57671634 - MGP_LPJ_P0092314 Ccdc33 protein_coding protein_coding MGP_LPJ_T0092778.1 MGP_LPJ_G0034900.1 mouse_genomes_project 9 71142780 71278473 - MGP_LPJ_P0092778 Lipc protein_coding protein_coding MGP_LPJ_T0092779.1 MGP_LPJ_G0034900.1 mouse_genomes_project 9 71142918 71168221 - MGP_LPJ_P0092779 Lipc protein_coding unknown_likely_coding MGP_LPJ_T0092780.1 MGP_LPJ_G0034900.1 mouse_genomes_project 9 71142918 71168655 - MGP_LPJ_P0092780 Lipc protein_coding unknown_likely_coding MGP_LPJ_T0092781.1 MGP_LPJ_G0034900.1 mouse_genomes_project 9 71142918 71176317 - MGP_LPJ_P0092781 Lipc protein_coding unknown_likely_coding MGP_LPJ_T0092263.1 MGP_LPJ_G0034759.1 mouse_genomes_project 9 56733097 56743415 - MGP_LPJ_P0092263 1700017B05Rik protein_coding protein_coding MGP_LPJ_T0101123.1 MGP_LPJ_G0039386.1 mouse_genomes_project 9 88964396 88964528 - Gm25528 snoRNA snoRNA MGP_LPJ_T0009287.1 MGP_LPJ_G0007463.1 mouse_genomes_project 9 75375712 75419548 + Gm20649 lincRNA lincRNA MGP_LPJ_T0094590.1 MGP_LPJ_G0035232.1 mouse_genomes_project 9 112681037 112697902 + MGP_LPJ_P0094590 Cspg5 protein_coding protein_coding MGP_LPJ_T0094591.1 MGP_LPJ_G0035232.1 mouse_genomes_project 9 112681037 112697903 + MGP_LPJ_P0094591 Cspg5 protein_coding protein_coding MGP_LPJ_T0094592.1 MGP_LPJ_G0035232.1 mouse_genomes_project 9 112682737 112684860 + Cspg5 protein_coding retained_intron MGP_LPJ_T0094593.1 MGP_LPJ_G0035232.1 mouse_genomes_project 9 112682785 112697890 + MGP_LPJ_P0094593 Cspg5 protein_coding protein_coding MGP_LPJ_T0094594.1 MGP_LPJ_G0035232.1 mouse_genomes_project 9 112683319 112697902 + MGP_LPJ_P0094594 Cspg5 protein_coding protein_coding MGP_LPJ_T0095092.1 MGP_LPJ_G0035371.1 mouse_genomes_project 9 127140105 127236088 + MGP_LPJ_P0095092 Ccr9 protein_coding protein_coding MGP_LPJ_T0095102.1 MGP_LPJ_G0035371.1 mouse_genomes_project 9 127220883 127236086 + MGP_LPJ_P0095102 Ccr9 protein_coding protein_coding MGP_LPJ_T0095103.1 MGP_LPJ_G0035371.1 mouse_genomes_project 9 127220899 127235648 + MGP_LPJ_P0095103 Ccr9 protein_coding protein_coding MGP_LPJ_T0095104.1 MGP_LPJ_G0035371.1 mouse_genomes_project 9 127220901 127236094 + MGP_LPJ_P0095104 Ccr9 protein_coding protein_coding MGP_LPJ_T0095105.1 MGP_LPJ_G0035371.1 mouse_genomes_project 9 127228804 127237579 + MGP_LPJ_P0095105 Ccr9 protein_coding protein_coding MGP_LPJ_T0093164.1 MGP_LPJ_G0034982.1 mouse_genomes_project 9 84735354 84773406 + Ttk protein_coding retained_intron MGP_LPJ_T0093165.1 MGP_LPJ_G0034982.1 mouse_genomes_project 9 84735355 84776302 + MGP_LPJ_P0093165 Ttk protein_coding protein_coding MGP_LPJ_T0093166.1 MGP_LPJ_G0034982.1 mouse_genomes_project 9 84735382 84776299 + MGP_LPJ_P0093166 Ttk protein_coding protein_coding MGP_LPJ_T0093167.1 MGP_LPJ_G0034982.1 mouse_genomes_project 9 84735398 84738163 + Ttk protein_coding retained_intron MGP_LPJ_T0093168.1 MGP_LPJ_G0034982.1 mouse_genomes_project 9 84735405 84745022 + Ttk protein_coding processed_transcript MGP_LPJ_T0093169.1 MGP_LPJ_G0034982.1 mouse_genomes_project 9 84735430 84743687 + MGP_LPJ_P0093169 Ttk protein_coding protein_coding MGP_LPJ_T0093170.1 MGP_LPJ_G0034982.1 mouse_genomes_project 9 84736446 84775981 + MGP_LPJ_P0093170 Ttk protein_coding unknown_likely_coding MGP_LPJ_T0093795.1 MGP_LPJ_G0035107.1 mouse_genomes_project 9 107831312 107920345 - MGP_LPJ_P0093795 Col6a5 protein_coding protein_coding MGP_LPJ_T0093796.1 MGP_LPJ_G0035107.1 mouse_genomes_project 9 107850267 107856357 - Col6a5 protein_coding retained_intron MGP_LPJ_T0094674.1 MGP_LPJ_G0035247.1 mouse_genomes_project 9 113302238 113307319 + MGP_LPJ_P0094674 Prss43 protein_coding protein_coding MGP_LPJ_T0090889.1 MGP_LPJ_G0034236.1 mouse_genomes_project 9 5859575 5863569 + MGP_LPJ_P0090889 Gm16485 protein_coding protein_coding MGP_LPJ_T0091158.1 MGP_LPJ_G0034350.1 mouse_genomes_project 9 18785001 18797803 + MGP_LPJ_P0091158 Qtrt1 protein_coding protein_coding MGP_LPJ_T0092116.1 MGP_LPJ_G0034714.1 mouse_genomes_project 9 53262689 53323995 - MGP_LPJ_P0092116 Elmod1 protein_coding protein_coding MGP_LPJ_T0092117.1 MGP_LPJ_G0034714.1 mouse_genomes_project 9 53262689 53290529 - MGP_LPJ_P0092117 Elmod1 protein_coding protein_coding MGP_LPJ_T0091531.1 MGP_LPJ_G0034474.1 mouse_genomes_project 9 35997547 35998595 + MGP_LPJ_P0091531 Olfr876 protein_coding protein_coding MGP_LPJ_T0009347.1 MGP_LPJ_G0007511.1 mouse_genomes_project 9 110729448 110731090 + 4833445I07Rik lincRNA lincRNA MGP_LPJ_T0009348.1 MGP_LPJ_G0007511.1 mouse_genomes_project 9 110729808 110730690 + 4833445I07Rik lincRNA lincRNA MGP_LPJ_T0093336.1 MGP_LPJ_G0035017.1 mouse_genomes_project 9 92592769 92608580 + MGP_LPJ_P0093336 Zic4 protein_coding protein_coding MGP_LPJ_T0093337.1 MGP_LPJ_G0035017.1 mouse_genomes_project 9 92598078 92598845 + Zic4 protein_coding processed_transcript MGP_LPJ_T0093338.1 MGP_LPJ_G0035017.1 mouse_genomes_project 9 92598523 92608922 + MGP_LPJ_P0093338 Zic4 protein_coding protein_coding MGP_LPJ_T0093339.1 MGP_LPJ_G0035017.1 mouse_genomes_project 9 92598605 92610648 + Zic4 protein_coding retained_intron MGP_LPJ_T0093340.1 MGP_LPJ_G0035017.1 mouse_genomes_project 9 92598681 92618152 + MGP_LPJ_P0093340 Zic4 protein_coding protein_coding MGP_LPJ_T0093341.1 MGP_LPJ_G0035017.1 mouse_genomes_project 9 92599201 92609205 + Zic4 protein_coding retained_intron MGP_LPJ_T0093342.1 MGP_LPJ_G0035017.1 mouse_genomes_project 9 92600707 92608854 + MGP_LPJ_P0093342 Zic4 protein_coding protein_coding MGP_LPJ_T0093343.1 MGP_LPJ_G0035017.1 mouse_genomes_project 9 92600916 92617317 + MGP_LPJ_P0093343 Zic4 protein_coding protein_coding MGP_LPJ_T0093344.1 MGP_LPJ_G0035017.1 mouse_genomes_project 9 92601053 92603621 + Zic4 protein_coding retained_intron MGP_LPJ_T0093345.1 MGP_LPJ_G0035017.1 mouse_genomes_project 9 92607861 92614092 + Zic4 protein_coding retained_intron MGP_LPJ_T0093346.1 MGP_LPJ_G0035017.1 mouse_genomes_project 9 92608306 92619700 + MGP_LPJ_P0093346 Zic4 protein_coding protein_coding MGP_LPJ_T0093347.1 MGP_LPJ_G0035017.1 mouse_genomes_project 9 92612103 92618403 + Zic4 protein_coding processed_transcript MGP_LPJ_T0098333.1 MGP_LPJ_G0036614.1 mouse_genomes_project 9 65869085 65869198 + n-R5s85 rRNA rRNA MGP_LPJ_T0002373.1 MGP_LPJ_G0002280.1 mouse_genomes_project 9 27814555 27868559 - TEC TEC MGP_LPJ_T0002374.1 MGP_LPJ_G0002281.1 mouse_genomes_project 9 30442960 30445977 - TEC TEC MGP_LPJ_T0090872.1 MGP_LPJ_G0034230.1 mouse_genomes_project 9 4853394 4928164 - MGP_LPJ_P0090872 Yap1 protein_coding protein_coding MGP_LPJ_T0090873.1 MGP_LPJ_G0034230.1 mouse_genomes_project 9 4853394 4928172 - MGP_LPJ_P0090873 Yap1 protein_coding protein_coding MGP_LPJ_T0090874.1 MGP_LPJ_G0034230.1 mouse_genomes_project 9 4856921 4925281 - MGP_LPJ_P0090874 Yap1 protein_coding protein_coding MGP_LPJ_T0090875.1 MGP_LPJ_G0034230.1 mouse_genomes_project 9 4856921 4927966 - MGP_LPJ_P0090875 Yap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0090876.1 MGP_LPJ_G0034230.1 mouse_genomes_project 9 4856921 4927966 - MGP_LPJ_P0090876 Yap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0090877.1 MGP_LPJ_G0034230.1 mouse_genomes_project 9 4856921 4927966 - MGP_LPJ_P0090877 Yap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0090878.1 MGP_LPJ_G0034230.1 mouse_genomes_project 9 4885503 4889019 - Yap1 protein_coding processed_transcript MGP_LPJ_T0090879.1 MGP_LPJ_G0034230.1 mouse_genomes_project 9 4897103 4927333 - Yap1 protein_coding processed_transcript MGP_LPJ_T0090880.1 MGP_LPJ_G0034230.1 mouse_genomes_project 9 4897145 4927351 - Yap1 protein_coding processed_transcript MGP_LPJ_T0090881.1 MGP_LPJ_G0034230.1 mouse_genomes_project 9 4920477 4928172 - Yap1 protein_coding retained_intron MGP_LPJ_T0093559.1 MGP_LPJ_G0035066.1 mouse_genomes_project 9 102122573 102155760 - MGP_LPJ_P0093559 Il20rb protein_coding protein_coding MGP_LPJ_T0093560.1 MGP_LPJ_G0035066.1 mouse_genomes_project 9 102122575 102133733 - Il20rb protein_coding retained_intron MGP_LPJ_T0093561.1 MGP_LPJ_G0035066.1 mouse_genomes_project 9 102122658 102126618 - Il20rb protein_coding processed_transcript MGP_LPJ_T0093562.1 MGP_LPJ_G0035066.1 mouse_genomes_project 9 102123384 102126590 - Il20rb protein_coding retained_intron MGP_LPJ_T0093563.1 MGP_LPJ_G0035066.1 mouse_genomes_project 9 102123931 102137454 - Il20rb protein_coding processed_transcript MGP_LPJ_T0093564.1 MGP_LPJ_G0035066.1 mouse_genomes_project 9 102132565 102155357 - Il20rb protein_coding retained_intron MGP_LPJ_T0009294.1 MGP_LPJ_G0007469.1 mouse_genomes_project 9 79999124 79999563 + Gm28620 lincRNA lincRNA MGP_LPJ_T0094808.1 MGP_LPJ_G0035274.1 mouse_genomes_project 9 117132202 117148336 - Crtap protein_coding retained_intron MGP_LPJ_T0094809.1 MGP_LPJ_G0035274.1 mouse_genomes_project 9 117132202 117160780 - MGP_LPJ_P0094809 Crtap protein_coding protein_coding MGP_LPJ_T0092988.1 MGP_LPJ_G0034943.1 mouse_genomes_project 9 76817925 76924568 - MGP_LPJ_P0092988 Hcrtr2 protein_coding protein_coding MGP_LPJ_T0092989.1 MGP_LPJ_G0034943.1 mouse_genomes_project 9 76821975 76924813 - MGP_LPJ_P0092989 Hcrtr2 protein_coding protein_coding MGP_LPJ_T0092990.1 MGP_LPJ_G0034943.1 mouse_genomes_project 9 76922632 76924279 - Hcrtr2 protein_coding retained_intron MGP_LPJ_T0093051.1 MGP_LPJ_G0034959.1 mouse_genomes_project 9 79031034 79035135 - MGP_LPJ_P0093051 Gm8074 protein_coding protein_coding MGP_LPJ_T0098335.1 MGP_LPJ_G0036616.1 mouse_genomes_project 9 88285121 88285255 + Gm24649 rRNA rRNA MGP_LPJ_T0091707.1 MGP_LPJ_G0034585.1 mouse_genomes_project 9 42852962 42873382 - MGP_LPJ_P0091707 protein_coding nonsense_mediated_decay MGP_LPJ_T0091708.1 MGP_LPJ_G0034585.1 mouse_genomes_project 9 42852974 42860107 - protein_coding processed_transcript MGP_LPJ_T0092092.1 MGP_LPJ_G0034706.1 mouse_genomes_project 9 52766648 52866795 - MGP_LPJ_P0092092 Atm protein_coding protein_coding MGP_LPJ_T0092093.1 MGP_LPJ_G0034706.1 mouse_genomes_project 9 52767260 52866769 - MGP_LPJ_P0092093 Atm protein_coding unknown_likely_coding MGP_LPJ_T0092094.1 MGP_LPJ_G0034706.1 mouse_genomes_project 9 52767619 52770071 - Atm protein_coding retained_intron MGP_LPJ_T0092095.1 MGP_LPJ_G0034706.1 mouse_genomes_project 9 52772888 52782205 - MGP_LPJ_P0092095 Atm protein_coding protein_coding MGP_LPJ_T0092096.1 MGP_LPJ_G0034706.1 mouse_genomes_project 9 52851936 52866728 - Atm protein_coding retained_intron MGP_LPJ_T0092097.1 MGP_LPJ_G0034706.1 mouse_genomes_project 9 52857284 52866663 - MGP_LPJ_P0092097 Atm protein_coding protein_coding MGP_LPJ_T0098339.1 MGP_LPJ_G0036620.1 mouse_genomes_project 9 104316744 104316856 + Gm25669 rRNA rRNA MGP_LPJ_T0094211.1 MGP_LPJ_G0035173.1 mouse_genomes_project 9 110197944 110202512 + MGP_LPJ_P0094211 Mst1 protein_coding protein_coding MGP_LPJ_T0094212.1 MGP_LPJ_G0035173.1 mouse_genomes_project 9 110197962 110202504 + MGP_LPJ_P0094212 Mst1 protein_coding protein_coding MGP_LPJ_T0094213.1 MGP_LPJ_G0035173.1 mouse_genomes_project 9 110197991 110199823 + MGP_LPJ_P0094213 Mst1 protein_coding nonsense_mediated_decay MGP_LPJ_T0094214.1 MGP_LPJ_G0035173.1 mouse_genomes_project 9 110201813 110202507 + MGP_LPJ_P0094214 Mst1 protein_coding protein_coding MGP_LPJ_T0092982.1 MGP_LPJ_G0034941.1 mouse_genomes_project 9 76605026 76666268 + Hmgcll1 protein_coding retained_intron MGP_LPJ_T0092983.1 MGP_LPJ_G0034941.1 mouse_genomes_project 9 76605026 76662263 + Hmgcll1 protein_coding retained_intron MGP_LPJ_T0092984.1 MGP_LPJ_G0034941.1 mouse_genomes_project 9 76605059 76727234 + MGP_LPJ_P0092984 Hmgcll1 protein_coding protein_coding MGP_LPJ_T0092985.1 MGP_LPJ_G0034941.1 mouse_genomes_project 9 76605079 76727001 + MGP_LPJ_P0092985 Hmgcll1 protein_coding protein_coding MGP_LPJ_T0091581.1 MGP_LPJ_G0034517.1 mouse_genomes_project 9 37281593 37283964 - MGP_LPJ_P0091581 Olfr935 protein_coding protein_coding MGP_LPJ_T0093185.1 MGP_LPJ_G0034986.1 mouse_genomes_project 9 86846960 86851650 + MGP_LPJ_P0093185 Tpbg protein_coding protein_coding MGP_LPJ_T0093186.1 MGP_LPJ_G0034986.1 mouse_genomes_project 9 86847445 86851650 + MGP_LPJ_P0093186 Tpbg protein_coding protein_coding MGP_LPJ_T0093187.1 MGP_LPJ_G0034986.1 mouse_genomes_project 9 86847987 86848552 + Tpbg protein_coding processed_transcript MGP_LPJ_T0011067.1 MGP_LPJ_G0009185.1 mouse_genomes_project 9 18878302 18878372 - Mir199a-1 miRNA miRNA MGP_LPJ_T0011125.1 MGP_LPJ_G0009243.1 mouse_genomes_project 9 118219782 118219905 + Mir467h miRNA miRNA MGP_LPJ_T0002421.1 MGP_LPJ_G0002328.1 mouse_genomes_project 9 86748502 86749854 + TEC TEC MGP_LPJ_T0011126.1 MGP_LPJ_G0009244.1 mouse_genomes_project 9 118252774 118252972 - miRNA miRNA MGP_LPJ_T0092849.1 MGP_LPJ_G0034909.1 mouse_genomes_project 9 72804912 72815455 + MGP_LPJ_P0092849 Mns1 protein_coding protein_coding MGP_LPJ_T0092850.1 MGP_LPJ_G0034909.1 mouse_genomes_project 9 72805423 72819385 + MGP_LPJ_P0092850 Mns1 protein_coding protein_coding MGP_LPJ_T0092851.1 MGP_LPJ_G0034909.1 mouse_genomes_project 9 72805432 72828698 + MGP_LPJ_P0092851 Mns1 protein_coding protein_coding MGP_LPJ_T0011070.1 MGP_LPJ_G0009188.1 mouse_genomes_project 9 19564072 19564142 - Mir7084 miRNA miRNA MGP_LPJ_T0091615.1 MGP_LPJ_G0034545.1 mouse_genomes_project 9 38320067 38321005 + MGP_LPJ_P0091615 Olfr972 protein_coding protein_coding MGP_LPJ_T0093485.1 MGP_LPJ_G0035045.1 mouse_genomes_project 9 99836305 99953012 + MGP_LPJ_P0093485 Nmnat3 protein_coding protein_coding MGP_LPJ_T0093486.1 MGP_LPJ_G0035045.1 mouse_genomes_project 9 99836325 99917979 + Nmnat3 protein_coding processed_transcript MGP_LPJ_T0093487.1 MGP_LPJ_G0035045.1 mouse_genomes_project 9 99845476 99905550 + Nmnat3 protein_coding retained_intron MGP_LPJ_T0093488.1 MGP_LPJ_G0035045.1 mouse_genomes_project 9 99845476 99974070 + MGP_LPJ_P0093488 Nmnat3 protein_coding protein_coding MGP_LPJ_T0093490.1 MGP_LPJ_G0035045.1 mouse_genomes_project 9 99903848 99964160 + MGP_LPJ_P0093490 Nmnat3 protein_coding protein_coding MGP_LPJ_T0093239.1 MGP_LPJ_G0034996.1 mouse_genomes_project 9 88227421 88266693 + MGP_LPJ_P0093239 Mrap2 protein_coding protein_coding MGP_LPJ_T0093240.1 MGP_LPJ_G0034996.1 mouse_genomes_project 9 88227421 88266693 + MGP_LPJ_P0093240 Mrap2 protein_coding protein_coding MGP_LPJ_T0093241.1 MGP_LPJ_G0034996.1 mouse_genomes_project 9 88227458 88266693 + MGP_LPJ_P0093241 Mrap2 protein_coding protein_coding MGP_LPJ_T0092661.1 MGP_LPJ_G0034873.1 mouse_genomes_project 9 66607584 66691749 - MGP_LPJ_P0092661 Usp3 protein_coding protein_coding MGP_LPJ_T0092662.1 MGP_LPJ_G0034873.1 mouse_genomes_project 9 66609231 66691607 - MGP_LPJ_P0092662 Usp3 protein_coding nonsense_mediated_decay MGP_LPJ_T0092663.1 MGP_LPJ_G0034873.1 mouse_genomes_project 9 66610224 66691643 - MGP_LPJ_P0092663 Usp3 protein_coding protein_coding MGP_LPJ_T0092664.1 MGP_LPJ_G0034873.1 mouse_genomes_project 9 66610874 66691565 - Usp3 protein_coding retained_intron MGP_LPJ_T0092665.1 MGP_LPJ_G0034873.1 mouse_genomes_project 9 66611072 66691613 - MGP_LPJ_P0092665 Usp3 protein_coding protein_coding MGP_LPJ_T0092666.1 MGP_LPJ_G0034873.1 mouse_genomes_project 9 66611246 66613335 - Usp3 protein_coding retained_intron MGP_LPJ_T0092667.1 MGP_LPJ_G0034873.1 mouse_genomes_project 9 66611405 66613816 - Usp3 protein_coding retained_intron MGP_LPJ_T0092668.1 MGP_LPJ_G0034873.1 mouse_genomes_project 9 66619656 66624066 - Usp3 protein_coding retained_intron MGP_LPJ_T0092669.1 MGP_LPJ_G0034873.1 mouse_genomes_project 9 66619971 66635250 - Usp3 protein_coding processed_transcript MGP_LPJ_T0092670.1 MGP_LPJ_G0034873.1 mouse_genomes_project 9 66640361 66663713 - Usp3 protein_coding retained_intron MGP_LPJ_T0092671.1 MGP_LPJ_G0034873.1 mouse_genomes_project 9 66642766 66672799 - Usp3 protein_coding processed_transcript MGP_LPJ_T0009353.1 MGP_LPJ_G0007514.1 mouse_genomes_project 9 112724500 112729485 - Gm42775 lincRNA lincRNA MGP_LPJ_T0095085.1 MGP_LPJ_G0035367.1 mouse_genomes_project 9 126864795 126911255 + MGP_LPJ_P0095085 Limd1 protein_coding protein_coding MGP_LPJ_T0093251.1 MGP_LPJ_G0035000.1 mouse_genomes_project 9 89449267 89512500 - MGP_LPJ_P0093251 Snx14 protein_coding protein_coding MGP_LPJ_T0093252.1 MGP_LPJ_G0035000.1 mouse_genomes_project 9 89449269 89471658 - Snx14 protein_coding retained_intron MGP_LPJ_T0093253.1 MGP_LPJ_G0035000.1 mouse_genomes_project 9 89449269 89512447 - MGP_LPJ_P0093253 Snx14 protein_coding protein_coding MGP_LPJ_T0093254.1 MGP_LPJ_G0035000.1 mouse_genomes_project 9 89449281 89512507 - MGP_LPJ_P0093254 Snx14 protein_coding protein_coding MGP_LPJ_T0093255.1 MGP_LPJ_G0035000.1 mouse_genomes_project 9 89449284 89512463 - MGP_LPJ_P0093255 Snx14 protein_coding protein_coding MGP_LPJ_T0093256.1 MGP_LPJ_G0035000.1 mouse_genomes_project 9 89455190 89512478 - MGP_LPJ_P0093256 Snx14 protein_coding nonsense_mediated_decay MGP_LPJ_T0093257.1 MGP_LPJ_G0035000.1 mouse_genomes_project 9 89465208 89467520 - Snx14 protein_coding retained_intron MGP_LPJ_T0093259.1 MGP_LPJ_G0035000.1 mouse_genomes_project 9 89492882 89512461 - Snx14 protein_coding retained_intron MGP_LPJ_T0005574.1 MGP_LPJ_G0004703.1 mouse_genomes_project 9 112408340 112411208 - Gm43732 antisense antisense MGP_LPJ_T0005435.1 MGP_LPJ_G0004608.1 mouse_genomes_project 9 4579290 4609409 - AV064505 antisense antisense MGP_LPJ_T0095050.1 MGP_LPJ_G0035353.1 mouse_genomes_project 9 126179401 126186136 - MGP_LPJ_P0095050 Gm35549 protein_coding protein_coding MGP_LPJ_T0095051.1 MGP_LPJ_G0035353.1 mouse_genomes_project 9 126179401 126186136 - MGP_LPJ_P0095051 Gm35549 protein_coding protein_coding MGP_LPJ_T0095052.1 MGP_LPJ_G0035353.1 mouse_genomes_project 9 126179401 126186136 - MGP_LPJ_P0095052 Gm35549 protein_coding protein_coding MGP_LPJ_T0091501.1 MGP_LPJ_G0034461.1 mouse_genomes_project 9 35541509 35561390 + MGP_LPJ_P0091501 Hepacam protein_coding protein_coding MGP_LPJ_T0092121.1 MGP_LPJ_G0034718.1 mouse_genomes_project 9 53712974 53865282 - MGP_LPJ_P0092121 Dmxl2 protein_coding protein_coding MGP_LPJ_T0092122.1 MGP_LPJ_G0034718.1 mouse_genomes_project 9 53712980 53729278 - Dmxl2 protein_coding retained_intron MGP_LPJ_T0092123.1 MGP_LPJ_G0034718.1 mouse_genomes_project 9 53713076 53801467 - MGP_LPJ_P0092123 Dmxl2 protein_coding protein_coding MGP_LPJ_T0092124.1 MGP_LPJ_G0034718.1 mouse_genomes_project 9 53713927 53865152 - MGP_LPJ_P0092124 Dmxl2 protein_coding protein_coding MGP_LPJ_T0092125.1 MGP_LPJ_G0034718.1 mouse_genomes_project 9 53767603 53831532 - MGP_LPJ_P0092125 Dmxl2 protein_coding protein_coding MGP_LPJ_T0092126.1 MGP_LPJ_G0034718.1 mouse_genomes_project 9 53775763 53865227 - Dmxl2 protein_coding retained_intron MGP_LPJ_T0092127.1 MGP_LPJ_G0034718.1 mouse_genomes_project 9 53801377 53803048 - Dmxl2 protein_coding processed_transcript MGP_LPJ_T0092128.1 MGP_LPJ_G0034718.1 mouse_genomes_project 9 53830045 53865282 - Dmxl2 protein_coding retained_intron MGP_LPJ_T0092129.1 MGP_LPJ_G0034718.1 mouse_genomes_project 9 53831218 53865416 - MGP_LPJ_P0092129 Dmxl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0093496.1 MGP_LPJ_G0035049.1 mouse_genomes_project 9 100122797 100126393 + Copb2 protein_coding retained_intron MGP_LPJ_T0093497.1 MGP_LPJ_G0035049.1 mouse_genomes_project 9 100122807 100147002 + MGP_LPJ_P0093497 Copb2 protein_coding protein_coding MGP_LPJ_T0093498.1 MGP_LPJ_G0035049.1 mouse_genomes_project 9 100138570 100139842 + Copb2 protein_coding retained_intron MGP_LPJ_T0093499.1 MGP_LPJ_G0035049.1 mouse_genomes_project 9 100145464 100146449 + Copb2 protein_coding retained_intron MGP_LPJ_T0093500.1 MGP_LPJ_G0035049.1 mouse_genomes_project 9 100145965 100146651 + Copb2 protein_coding retained_intron MGP_LPJ_T0093501.1 MGP_LPJ_G0035049.1 mouse_genomes_project 9 100146166 100146881 + Copb2 protein_coding retained_intron MGP_LPJ_T0011119.1 MGP_LPJ_G0009237.1 mouse_genomes_project 9 111105359 111105441 + Mir711 miRNA miRNA MGP_LPJ_T0091632.1 MGP_LPJ_G0034561.1 mouse_genomes_project 9 38751465 38761710 + Scn3b protein_coding processed_transcript MGP_LPJ_T0091633.1 MGP_LPJ_G0034561.1 mouse_genomes_project 9 38751476 38760367 + Scn3b protein_coding retained_intron MGP_LPJ_T0091634.1 MGP_LPJ_G0034561.1 mouse_genomes_project 9 38751536 38775732 + MGP_LPJ_P0091634 Scn3b protein_coding protein_coding MGP_LPJ_T0091635.1 MGP_LPJ_G0034561.1 mouse_genomes_project 9 38751625 38759613 + Scn3b protein_coding retained_intron MGP_LPJ_T0091636.1 MGP_LPJ_G0034561.1 mouse_genomes_project 9 38751883 38772515 + MGP_LPJ_P0091636 Scn3b protein_coding protein_coding MGP_LPJ_T0093491.1 MGP_LPJ_G0035047.1 mouse_genomes_project 9 99976594 100002945 + MGP_LPJ_P0093491 Rbp1 protein_coding protein_coding MGP_LPJ_T0098072.1 MGP_LPJ_G0036353.1 mouse_genomes_project 9 16432076 16433025 + pseudogene pseudogene MGP_LPJ_T0092326.1 MGP_LPJ_G0034781.1 mouse_genomes_project 9 57710156 57713113 - MGP_LPJ_P0092326 Islr protein_coding protein_coding MGP_LPJ_T0092327.1 MGP_LPJ_G0034781.1 mouse_genomes_project 9 57710156 57712446 - MGP_LPJ_P0092327 Islr protein_coding protein_coding MGP_LPJ_T0091977.1 MGP_LPJ_G0034670.1 mouse_genomes_project 9 48730549 48775311 + MGP_LPJ_P0091977 Gm11149 protein_coding protein_coding MGP_LPJ_T0092490.1 MGP_LPJ_G0034823.1 mouse_genomes_project 9 63009332 63020124 - MGP_LPJ_P0092490 Skor1 protein_coding protein_coding MGP_LPJ_T0092491.1 MGP_LPJ_G0034823.1 mouse_genomes_project 9 63009332 63018174 - MGP_LPJ_P0092491 Skor1 protein_coding protein_coding MGP_LPJ_T0092492.1 MGP_LPJ_G0034823.1 mouse_genomes_project 9 63009338 63018143 - MGP_LPJ_P0092492 Skor1 protein_coding protein_coding MGP_LPJ_T0005528.1 MGP_LPJ_G0004667.1 mouse_genomes_project 9 97435843 97437315 - C78334 antisense antisense MGP_LPJ_T0005529.1 MGP_LPJ_G0004667.1 mouse_genomes_project 9 97435851 97442604 - C78334 antisense antisense MGP_LPJ_T0002487.1 MGP_LPJ_G0002393.1 mouse_genomes_project 9 110702073 110703219 + TEC TEC MGP_LPJ_T0091523.1 MGP_LPJ_G0034470.1 mouse_genomes_project 9 35827932 35835944 - Tbrg1 protein_coding retained_intron MGP_LPJ_T0091524.1 MGP_LPJ_G0034470.1 mouse_genomes_project 9 35827932 35836043 - MGP_LPJ_P0091524 Tbrg1 protein_coding protein_coding MGP_LPJ_T0091525.1 MGP_LPJ_G0034470.1 mouse_genomes_project 9 35830663 35835889 - Tbrg1 protein_coding retained_intron MGP_LPJ_T0091526.1 MGP_LPJ_G0034470.1 mouse_genomes_project 9 35832605 35835899 - Tbrg1 protein_coding retained_intron MGP_LPJ_T0009373.1 MGP_LPJ_G0007529.1 mouse_genomes_project 9 126229557 126247662 - A530083I20Rik lincRNA lincRNA MGP_LPJ_T0009374.1 MGP_LPJ_G0007529.1 mouse_genomes_project 9 126239848 126247648 - A530083I20Rik lincRNA lincRNA MGP_LPJ_T0009225.1 MGP_LPJ_G0007412.1 mouse_genomes_project 9 18778399 18784885 - Gm16853 lincRNA lincRNA MGP_LPJ_T0095123.1 MGP_LPJ_G0035381.1 mouse_genomes_project 9 127730650 127735847 + MGP_LPJ_P0095123 Nlrp4g protein_coding protein_coding MGP_LPJ_T0094919.1 MGP_LPJ_G0035308.1 mouse_genomes_project 9 122470098 122511260 + MGP_LPJ_P0094919 Xylb protein_coding protein_coding MGP_LPJ_T0093383.1 MGP_LPJ_G0035028.1 mouse_genomes_project 9 96948378 96956743 + MGP_LPJ_P0093383 Paqr9 protein_coding protein_coding MGP_LPJ_T0091192.1 MGP_LPJ_G0034358.1 mouse_genomes_project 9 19113470 19139469 + MGP_LPJ_P0091192 Ldlr protein_coding protein_coding MGP_LPJ_T0092504.1 MGP_LPJ_G0034827.1 mouse_genomes_project 9 63503335 63542442 + MGP_LPJ_P0092504 Aagab protein_coding protein_coding MGP_LPJ_T0093928.1 MGP_LPJ_G0035135.1 mouse_genomes_project 9 108948484 109293623 - MGP_LPJ_P0093928 Dock3 protein_coding protein_coding MGP_LPJ_T0093929.1 MGP_LPJ_G0035135.1 mouse_genomes_project 9 108948765 108970533 - MGP_LPJ_P0093929 Dock3 protein_coding protein_coding MGP_LPJ_T0093930.1 MGP_LPJ_G0035135.1 mouse_genomes_project 9 108952436 108957435 - MGP_LPJ_P0093930 Dock3 protein_coding protein_coding MGP_LPJ_T0093931.1 MGP_LPJ_G0035135.1 mouse_genomes_project 9 108964109 108966163 - Dock3 protein_coding processed_transcript MGP_LPJ_T0093932.1 MGP_LPJ_G0035135.1 mouse_genomes_project 9 108968890 108970835 - Dock3 protein_coding retained_intron MGP_LPJ_T0093933.1 MGP_LPJ_G0035135.1 mouse_genomes_project 9 108972033 109004131 - MGP_LPJ_P0093933 Dock3 protein_coding protein_coding MGP_LPJ_T0093934.1 MGP_LPJ_G0035135.1 mouse_genomes_project 9 108995573 109019461 - MGP_LPJ_P0093934 Dock3 protein_coding protein_coding MGP_LPJ_T0093935.1 MGP_LPJ_G0035135.1 mouse_genomes_project 9 109077395 109079281 - Dock3 protein_coding retained_intron MGP_LPJ_T0093936.1 MGP_LPJ_G0035135.1 mouse_genomes_project 9 109105688 109293582 - Dock3 protein_coding retained_intron MGP_LPJ_T0093937.1 MGP_LPJ_G0035135.1 mouse_genomes_project 9 109138463 109293570 - Dock3 protein_coding retained_intron MGP_LPJ_T0093938.1 MGP_LPJ_G0035135.1 mouse_genomes_project 9 109159041 109293296 - Dock3 protein_coding retained_intron MGP_LPJ_T0092367.1 MGP_LPJ_G0034792.1 mouse_genomes_project 9 58463713 58633933 - MGP_LPJ_P0092367 Neo1 protein_coding protein_coding MGP_LPJ_T0092368.1 MGP_LPJ_G0034792.1 mouse_genomes_project 9 58463865 58633620 - MGP_LPJ_P0092368 Neo1 protein_coding unknown_likely_coding MGP_LPJ_T0002497.1 MGP_LPJ_G0002403.1 mouse_genomes_project 9 113922043 113923539 + TEC TEC MGP_LPJ_T0092266.1 MGP_LPJ_G0034762.1 mouse_genomes_project 9 57013695 57015043 + MGP_LPJ_P0092266 Rpp25 protein_coding protein_coding MGP_LPJ_T0015980.1 MGP_LPJ_G0014071.1 mouse_genomes_project 9 22405311 22406613 - processed_pseudogene processed_pseudogene MGP_LPJ_T0094794.1 MGP_LPJ_G0035269.1 mouse_genomes_project 9 116488682 116599893 + MGP_LPJ_P0094794 Clasp2 protein_coding protein_coding MGP_LPJ_T0094795.1 MGP_LPJ_G0035269.1 mouse_genomes_project 9 116488682 116599893 + MGP_LPJ_P0094795 Clasp2 protein_coding protein_coding MGP_LPJ_T0094796.1 MGP_LPJ_G0035269.1 mouse_genomes_project 9 116488696 116598348 + MGP_LPJ_P0094796 Clasp2 protein_coding protein_coding MGP_LPJ_T0015997.1 MGP_LPJ_G0014088.1 mouse_genomes_project 9 44119283 44119519 + processed_pseudogene processed_pseudogene MGP_LPJ_T0091969.1 MGP_LPJ_G0034666.1 mouse_genomes_project 9 48544962 48612569 + MGP_LPJ_P0091969 Drd2 protein_coding protein_coding MGP_LPJ_T0092792.1 MGP_LPJ_G0034903.1 mouse_genomes_project 9 71810858 71818192 - MGP_LPJ_P0092792 Polr2m protein_coding protein_coding MGP_LPJ_T0092797.1 MGP_LPJ_G0034903.1 mouse_genomes_project 9 71813867 71818306 - MGP_LPJ_P0092797 Polr2m protein_coding nonsense_mediated_decay MGP_LPJ_T0095106.1 MGP_LPJ_G0035373.1 mouse_genomes_project 9 127242176 127308457 - MGP_LPJ_P0095106 protein_coding unknown_likely_coding MGP_LPJ_T0095108.1 MGP_LPJ_G0035373.1 mouse_genomes_project 9 127283717 127308297 - MGP_LPJ_P0095108 protein_coding protein_coding MGP_LPJ_T0095109.1 MGP_LPJ_G0035373.1 mouse_genomes_project 9 127294511 127308302 - protein_coding retained_intron MGP_LPJ_T0092617.1 MGP_LPJ_G0034864.1 mouse_genomes_project 9 65927157 65941840 + MGP_LPJ_P0092617 2810417H13Rik protein_coding protein_coding MGP_LPJ_T0092618.1 MGP_LPJ_G0034864.1 mouse_genomes_project 9 65927240 65932404 + 2810417H13Rik protein_coding retained_intron MGP_LPJ_T0092619.1 MGP_LPJ_G0034864.1 mouse_genomes_project 9 65927282 65930094 + 2810417H13Rik protein_coding retained_intron MGP_LPJ_T0093569.1 MGP_LPJ_G0035068.1 mouse_genomes_project 9 102220735 102239844 - MGP_LPJ_P0093569 Slc35g2 protein_coding protein_coding MGP_LPJ_T0093570.1 MGP_LPJ_G0035068.1 mouse_genomes_project 9 102220737 102221463 - Slc35g2 protein_coding processed_transcript MGP_LPJ_T0005576.1 MGP_LPJ_G0004705.1 mouse_genomes_project 9 113470119 113471540 + 1700061E17Rik antisense antisense MGP_LPJ_T0091130.1 MGP_LPJ_G0034341.1 mouse_genomes_project 9 18527900 18576664 + MGP_LPJ_P0091130 Pde4a protein_coding protein_coding MGP_LPJ_T0091131.1 MGP_LPJ_G0034341.1 mouse_genomes_project 9 18543808 18575043 + Pde4a protein_coding retained_intron MGP_LPJ_T0091132.1 MGP_LPJ_G0034341.1 mouse_genomes_project 9 18546293 18555686 + Pde4a protein_coding retained_intron MGP_LPJ_T0091133.1 MGP_LPJ_G0034341.1 mouse_genomes_project 9 18546295 18575043 + MGP_LPJ_P0091133 Pde4a protein_coding protein_coding MGP_LPJ_T0091134.1 MGP_LPJ_G0034341.1 mouse_genomes_project 9 18554384 18556941 + Pde4a protein_coding retained_intron MGP_LPJ_T0091135.1 MGP_LPJ_G0034341.1 mouse_genomes_project 9 18558755 18575043 + MGP_LPJ_P0091135 Pde4a protein_coding protein_coding MGP_LPJ_T0009354.1 MGP_LPJ_G0007515.1 mouse_genomes_project 9 113114279 113115056 + Gm42470 lincRNA lincRNA MGP_LPJ_T0016007.1 MGP_LPJ_G0014098.1 mouse_genomes_project 9 59516044 59516321 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016004.1 MGP_LPJ_G0014095.1 mouse_genomes_project 9 59126857 59127332 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091416.1 MGP_LPJ_G0034433.1 mouse_genomes_project 9 33471364 33508702 + MGP_LPJ_P0091416 Cdon protein_coding protein_coding MGP_LPJ_T0091417.1 MGP_LPJ_G0034433.1 mouse_genomes_project 9 33471790 33508677 + MGP_LPJ_P0091417 Cdon protein_coding nonsense_mediated_decay MGP_LPJ_T0091418.1 MGP_LPJ_G0034433.1 mouse_genomes_project 9 33471833 33564035 + MGP_LPJ_P0091418 Cdon protein_coding protein_coding MGP_LPJ_T0091419.1 MGP_LPJ_G0034433.1 mouse_genomes_project 9 33473826 33524370 + MGP_LPJ_P0091419 Cdon protein_coding protein_coding MGP_LPJ_T0091420.1 MGP_LPJ_G0034433.1 mouse_genomes_project 9 33505431 33564034 + MGP_LPJ_P0091420 Cdon protein_coding protein_coding MGP_LPJ_T0091421.1 MGP_LPJ_G0034433.1 mouse_genomes_project 9 33510788 33523301 + MGP_LPJ_P0091421 Cdon protein_coding protein_coding MGP_LPJ_T0092153.1 MGP_LPJ_G0034729.1 mouse_genomes_project 9 54330326 54331118 - MGP_LPJ_P0092153 AY074887 protein_coding protein_coding MGP_LPJ_T0091948.1 MGP_LPJ_G0034655.1 mouse_genomes_project 9 47603915 47615980 - MGP_LPJ_P0091948 Rexo2 protein_coding protein_coding MGP_LPJ_T0016001.1 MGP_LPJ_G0014092.1 mouse_genomes_project 9 54703731 54704824 + processed_pseudogene processed_pseudogene MGP_LPJ_T0092534.1 MGP_LPJ_G0034834.1 mouse_genomes_project 9 64123060 64191249 - MGP_LPJ_P0092534 Map2k1 protein_coding protein_coding MGP_LPJ_T0092535.1 MGP_LPJ_G0034834.1 mouse_genomes_project 9 64123819 64125155 - Map2k1 protein_coding retained_intron MGP_LPJ_T0092536.1 MGP_LPJ_G0034834.1 mouse_genomes_project 9 64124027 64125547 - Map2k1 protein_coding retained_intron MGP_LPJ_T0092537.1 MGP_LPJ_G0034834.1 mouse_genomes_project 9 64124579 64132816 - Map2k1 protein_coding processed_transcript MGP_LPJ_T0098330.1 MGP_LPJ_G0036611.1 mouse_genomes_project 9 59729052 59729163 - Gm23668 rRNA rRNA MGP_LPJ_T0093678.1 MGP_LPJ_G0035088.1 mouse_genomes_project 9 105174749 105189391 - MGP_LPJ_P0093678 Cdv3 protein_coding protein_coding MGP_LPJ_T0093679.1 MGP_LPJ_G0035088.1 mouse_genomes_project 9 105174791 105189883 - MGP_LPJ_P0093679 Cdv3 protein_coding protein_coding MGP_LPJ_T0093680.1 MGP_LPJ_G0035088.1 mouse_genomes_project 9 105180106 105189632 - MGP_LPJ_P0093680 Cdv3 protein_coding unknown_likely_coding MGP_LPJ_T0093681.1 MGP_LPJ_G0035088.1 mouse_genomes_project 9 105185654 105189244 - Cdv3 protein_coding retained_intron MGP_LPJ_T0093140.1 MGP_LPJ_G0034978.1 mouse_genomes_project 9 83972769 83973647 - Hmgn3 protein_coding processed_transcript MGP_LPJ_T0093141.1 MGP_LPJ_G0034978.1 mouse_genomes_project 9 83972769 84010524 - MGP_LPJ_P0093141 Hmgn3 protein_coding protein_coding MGP_LPJ_T0093142.1 MGP_LPJ_G0034978.1 mouse_genomes_project 9 83972769 84010309 - MGP_LPJ_P0093142 Hmgn3 protein_coding protein_coding MGP_LPJ_T0093143.1 MGP_LPJ_G0034978.1 mouse_genomes_project 9 83972769 84010369 - MGP_LPJ_P0093143 Hmgn3 protein_coding protein_coding MGP_LPJ_T0093144.1 MGP_LPJ_G0034978.1 mouse_genomes_project 9 83972769 84010444 - MGP_LPJ_P0093144 Hmgn3 protein_coding protein_coding MGP_LPJ_T0093145.1 MGP_LPJ_G0034978.1 mouse_genomes_project 9 83972789 83973953 - Hmgn3 protein_coding retained_intron MGP_LPJ_T0093146.1 MGP_LPJ_G0034978.1 mouse_genomes_project 9 83973002 83975391 - Hmgn3 protein_coding retained_intron MGP_LPJ_T0093147.1 MGP_LPJ_G0034978.1 mouse_genomes_project 9 83973199 84010356 - MGP_LPJ_P0093147 Hmgn3 protein_coding nonsense_mediated_decay MGP_LPJ_T0093148.1 MGP_LPJ_G0034978.1 mouse_genomes_project 9 83973541 83973915 - Hmgn3 protein_coding retained_intron MGP_LPJ_T0009293.1 MGP_LPJ_G0007468.1 mouse_genomes_project 9 78874321 78877287 + C920006O11Rik lincRNA lincRNA MGP_LPJ_T0092265.1 MGP_LPJ_G0034761.1 mouse_genomes_project 9 56946004 56973789 - MGP_LPJ_P0092265 Scamp5 protein_coding unknown_likely_coding MGP_LPJ_T0091758.1 MGP_LPJ_G0034599.1 mouse_genomes_project 9 43133763 43148161 - MGP_LPJ_P0091758 Vps11 protein_coding protein_coding MGP_LPJ_T0093971.1 MGP_LPJ_G0035141.1 mouse_genomes_project 9 109615551 109620284 + MGP_LPJ_P0093971 Tmem115 protein_coding protein_coding MGP_LPJ_T0101070.1 MGP_LPJ_G0039333.1 mouse_genomes_project 9 56400 56530 + Gm24918 snoRNA snoRNA MGP_LPJ_T0092713.1 MGP_LPJ_G0034884.1 mouse_genomes_project 9 68026944 68172664 + MGP_LPJ_P0092713 Vps13c protein_coding unknown_likely_coding MGP_LPJ_T0092714.1 MGP_LPJ_G0034884.1 mouse_genomes_project 9 68026946 68184956 + MGP_LPJ_P0092714 Vps13c protein_coding protein_coding MGP_LPJ_T0091542.1 MGP_LPJ_G0034484.1 mouse_genomes_project 9 36332873 36334032 + MGP_LPJ_P0091542 Olfr889 protein_coding protein_coding MGP_LPJ_T0091050.1 MGP_LPJ_G0034310.1 mouse_genomes_project 9 17480303 17481238 - MGP_LPJ_P0091050 protein_coding protein_coding MGP_LPJ_T0091621.1 MGP_LPJ_G0034551.1 mouse_genomes_project 9 38454000 38455045 - MGP_LPJ_P0091621 Olfr979 protein_coding protein_coding MGP_LPJ_T0005557.1 MGP_LPJ_G0004689.1 mouse_genomes_project 9 109495396 109502188 - Gm17141 antisense antisense MGP_LPJ_T0101134.1 MGP_LPJ_G0039397.1 mouse_genomes_project 9 109211716 109211846 + Gm23595 snoRNA snoRNA MGP_LPJ_T0091325.1 MGP_LPJ_G0034411.1 mouse_genomes_project 9 28737824 28761111 - MGP_LPJ_P0091325 Adamts15 protein_coding protein_coding MGP_LPJ_T0091045.1 MGP_LPJ_G0034305.1 mouse_genomes_project 9 17330074 17331151 - MGP_LPJ_P0091045 Olfr866 protein_coding protein_coding MGP_LPJ_T0091597.1 MGP_LPJ_G0034533.1 mouse_genomes_project 9 37933663 37934718 - MGP_LPJ_P0091597 Olfr959 protein_coding protein_coding MGP_LPJ_T0094816.1 MGP_LPJ_G0035281.1 mouse_genomes_project 9 117481128 117518462 + MGP_LPJ_P0094816 Dync1li1 protein_coding protein_coding MGP_LPJ_T0092772.1 MGP_LPJ_G0034897.1 mouse_genomes_project 9 70931450 70994061 - MGP_LPJ_P0092772 Fam63b protein_coding protein_coding MGP_LPJ_T0016069.1 MGP_LPJ_G0014160.1 mouse_genomes_project 9 92094132 92094424 - processed_pseudogene processed_pseudogene MGP_LPJ_T0092380.1 MGP_LPJ_G0034797.1 mouse_genomes_project 9 59200689 59226896 + MGP_LPJ_P0092380 Hexa protein_coding protein_coding MGP_LPJ_T0094251.1 MGP_LPJ_G0035182.1 mouse_genomes_project 9 110497804 110544355 + MGP_LPJ_P0094251 Usp4 protein_coding protein_coding MGP_LPJ_T0094252.1 MGP_LPJ_G0035182.1 mouse_genomes_project 9 110497825 110535736 + MGP_LPJ_P0094252 Usp4 protein_coding nonsense_mediated_decay MGP_LPJ_T0094253.1 MGP_LPJ_G0035182.1 mouse_genomes_project 9 110497848 110507789 + Usp4 protein_coding retained_intron MGP_LPJ_T0094254.1 MGP_LPJ_G0035182.1 mouse_genomes_project 9 110497864 110544330 + MGP_LPJ_P0094254 Usp4 protein_coding protein_coding MGP_LPJ_T0094255.1 MGP_LPJ_G0035182.1 mouse_genomes_project 9 110506429 110507904 + Usp4 protein_coding processed_transcript MGP_LPJ_T0094256.1 MGP_LPJ_G0035182.1 mouse_genomes_project 9 110509799 110512818 + Usp4 protein_coding retained_intron MGP_LPJ_T0094257.1 MGP_LPJ_G0035182.1 mouse_genomes_project 9 110517877 110520187 + Usp4 protein_coding retained_intron MGP_LPJ_T0094258.1 MGP_LPJ_G0035182.1 mouse_genomes_project 9 110522636 110544069 + MGP_LPJ_P0094258 Usp4 protein_coding protein_coding MGP_LPJ_T0094259.1 MGP_LPJ_G0035182.1 mouse_genomes_project 9 110531230 110543602 + MGP_LPJ_P0094259 Usp4 protein_coding protein_coding MGP_LPJ_T0094260.1 MGP_LPJ_G0035182.1 mouse_genomes_project 9 110542685 110544055 + Usp4 protein_coding retained_intron MGP_LPJ_T0101417.1 MGP_LPJ_G0039591.1 mouse_genomes_project 9 57764347 57770246 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101418.1 MGP_LPJ_G0039591.1 mouse_genomes_project 9 57769475 57769992 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0002416.1 MGP_LPJ_G0002323.1 mouse_genomes_project 9 78021892 78022443 + TEC TEC MGP_LPJ_T0094281.1 MGP_LPJ_G0035187.1 mouse_genomes_project 9 110613809 110619228 + MGP_LPJ_P0094281 Ccdc71 protein_coding protein_coding MGP_LPJ_T0094282.1 MGP_LPJ_G0035187.1 mouse_genomes_project 9 110613817 110616555 + MGP_LPJ_P0094282 Ccdc71 protein_coding protein_coding MGP_LPJ_T0094283.1 MGP_LPJ_G0035187.1 mouse_genomes_project 9 110614706 110619096 + MGP_LPJ_P0094283 Ccdc71 protein_coding protein_coding MGP_LPJ_T0016044.1 MGP_LPJ_G0014135.1 mouse_genomes_project 9 83031935 83032686 + processed_pseudogene processed_pseudogene MGP_LPJ_T0092639.1 MGP_LPJ_G0034866.1 mouse_genomes_project 9 66111265 66118649 + MGP_LPJ_P0092639 Ppib protein_coding protein_coding MGP_LPJ_T0011131.1 MGP_LPJ_G0009249.1 mouse_genomes_project 9 126018674 126018773 + Mir138-1 miRNA miRNA MGP_LPJ_T0002489.1 MGP_LPJ_G0002395.1 mouse_genomes_project 9 111085211 111085750 - TEC TEC MGP_LPJ_T0091619.1 MGP_LPJ_G0034549.1 mouse_genomes_project 9 38407873 38410686 - MGP_LPJ_P0091619 Olfr976 protein_coding protein_coding MGP_LPJ_T0101110.1 MGP_LPJ_G0039373.1 mouse_genomes_project 9 65991980 65992112 - Gm22657 snoRNA snoRNA MGP_LPJ_T0002461.1 MGP_LPJ_G0002367.1 mouse_genomes_project 9 102893246 102895931 - TEC TEC MGP_LPJ_T0011127.1 MGP_LPJ_G0009245.1 mouse_genomes_project 9 121000183 121000270 + Gm22008 miRNA miRNA MGP_LPJ_T0101108.1 MGP_LPJ_G0039371.1 mouse_genomes_project 9 64112382 64112453 + Gm22455 snoRNA snoRNA MGP_LPJ_T0002391.1 MGP_LPJ_G0002298.1 mouse_genomes_project 9 72333129 72335424 - TEC TEC MGP_LPJ_T0094387.1 MGP_LPJ_G0035200.1 mouse_genomes_project 9 110963576 110977772 + MGP_LPJ_P0094387 Ip6k2 protein_coding protein_coding MGP_LPJ_T0094388.1 MGP_LPJ_G0035200.1 mouse_genomes_project 9 110963576 110986026 + MGP_LPJ_P0094388 Ip6k2 protein_coding protein_coding MGP_LPJ_T0094389.1 MGP_LPJ_G0035200.1 mouse_genomes_project 9 110963602 110978617 + Ip6k2 protein_coding retained_intron MGP_LPJ_T0094390.1 MGP_LPJ_G0035200.1 mouse_genomes_project 9 110963643 110977475 + MGP_LPJ_P0094390 Ip6k2 protein_coding protein_coding MGP_LPJ_T0094391.1 MGP_LPJ_G0035200.1 mouse_genomes_project 9 110963645 110976760 + Ip6k2 protein_coding retained_intron MGP_LPJ_T0094392.1 MGP_LPJ_G0035200.1 mouse_genomes_project 9 110963645 110977128 + MGP_LPJ_P0094392 Ip6k2 protein_coding nonsense_mediated_decay MGP_LPJ_T0094393.1 MGP_LPJ_G0035200.1 mouse_genomes_project 9 110975776 110986031 + MGP_LPJ_P0094393 Ip6k2 protein_coding protein_coding MGP_LPJ_T0094394.1 MGP_LPJ_G0035200.1 mouse_genomes_project 9 110975776 110979052 + MGP_LPJ_P0094394 Ip6k2 protein_coding protein_coding MGP_LPJ_T0094395.1 MGP_LPJ_G0035200.1 mouse_genomes_project 9 110975846 110977225 + MGP_LPJ_P0094395 Ip6k2 protein_coding nonsense_mediated_decay MGP_LPJ_T0094396.1 MGP_LPJ_G0035200.1 mouse_genomes_project 9 110975913 110977777 + MGP_LPJ_P0094396 Ip6k2 protein_coding protein_coding MGP_LPJ_T0094397.1 MGP_LPJ_G0035200.1 mouse_genomes_project 9 110976134 110977476 + MGP_LPJ_P0094397 Ip6k2 protein_coding protein_coding MGP_LPJ_T0094398.1 MGP_LPJ_G0035200.1 mouse_genomes_project 9 110977969 110979155 + Ip6k2 protein_coding retained_intron MGP_LPJ_T0093917.1 MGP_LPJ_G0035133.1 mouse_genomes_project 9 108892157 108947527 - MGP_LPJ_P0093917 Manf protein_coding protein_coding MGP_LPJ_T0093919.1 MGP_LPJ_G0035133.1 mouse_genomes_project 9 108924305 108945939 - MGP_LPJ_P0093919 Manf protein_coding protein_coding MGP_LPJ_T0093923.1 MGP_LPJ_G0035133.1 mouse_genomes_project 9 108943071 108947634 - MGP_LPJ_P0093923 Manf protein_coding protein_coding MGP_LPJ_T0093924.1 MGP_LPJ_G0035133.1 mouse_genomes_project 9 108944409 108947070 - MGP_LPJ_P0093924 Manf protein_coding protein_coding MGP_LPJ_T0093925.1 MGP_LPJ_G0035133.1 mouse_genomes_project 9 108944740 108947525 - MGP_LPJ_P0093925 Manf protein_coding protein_coding MGP_LPJ_T0093926.1 MGP_LPJ_G0035133.1 mouse_genomes_project 9 108945686 108947570 - Manf protein_coding retained_intron MGP_LPJ_T0093927.1 MGP_LPJ_G0035133.1 mouse_genomes_project 9 108946218 108947572 - Manf protein_coding retained_intron MGP_LPJ_T0005572.1 MGP_LPJ_G0004701.1 mouse_genomes_project 9 111695930 111717022 + antisense antisense MGP_LPJ_T0094307.1 MGP_LPJ_G0035190.1 mouse_genomes_project 9 110662355 110670584 + MGP_LPJ_P0094307 Qars protein_coding protein_coding MGP_LPJ_T0094308.1 MGP_LPJ_G0035190.1 mouse_genomes_project 9 110662700 110665730 + Qars protein_coding retained_intron MGP_LPJ_T0094309.1 MGP_LPJ_G0035190.1 mouse_genomes_project 9 110662700 110666841 + Qars protein_coding retained_intron MGP_LPJ_T0094310.1 MGP_LPJ_G0035190.1 mouse_genomes_project 9 110662700 110665714 + Qars protein_coding retained_intron MGP_LPJ_T0094311.1 MGP_LPJ_G0035190.1 mouse_genomes_project 9 110662713 110670579 + MGP_LPJ_P0094311 Qars protein_coding protein_coding MGP_LPJ_T0094312.1 MGP_LPJ_G0035190.1 mouse_genomes_project 9 110664121 110670579 + MGP_LPJ_P0094312 Qars protein_coding protein_coding MGP_LPJ_T0094313.1 MGP_LPJ_G0035190.1 mouse_genomes_project 9 110666192 110668040 + Qars protein_coding retained_intron MGP_LPJ_T0094314.1 MGP_LPJ_G0035190.1 mouse_genomes_project 9 110666252 110667534 + Qars protein_coding retained_intron MGP_LPJ_T0094315.1 MGP_LPJ_G0035190.1 mouse_genomes_project 9 110667748 110668829 + Qars protein_coding retained_intron MGP_LPJ_T0094316.1 MGP_LPJ_G0035190.1 mouse_genomes_project 9 110667751 110669801 + MGP_LPJ_P0094316 Qars protein_coding protein_coding MGP_LPJ_T0094317.1 MGP_LPJ_G0035190.1 mouse_genomes_project 9 110667772 110668606 + Qars protein_coding processed_transcript MGP_LPJ_T0094318.1 MGP_LPJ_G0035190.1 mouse_genomes_project 9 110668186 110668773 + Qars protein_coding retained_intron MGP_LPJ_T0094319.1 MGP_LPJ_G0035190.1 mouse_genomes_project 9 110668368 110669001 + Qars protein_coding retained_intron MGP_LPJ_T0094320.1 MGP_LPJ_G0035190.1 mouse_genomes_project 9 110668706 110670579 + MGP_LPJ_P0094320 Qars protein_coding nonsense_mediated_decay MGP_LPJ_T0094321.1 MGP_LPJ_G0035190.1 mouse_genomes_project 9 110669390 110669838 + Qars protein_coding retained_intron MGP_LPJ_T0094322.1 MGP_LPJ_G0035190.1 mouse_genomes_project 9 110669393 110670572 + Qars protein_coding retained_intron MGP_LPJ_T0094323.1 MGP_LPJ_G0035190.1 mouse_genomes_project 9 110669461 110670579 + Qars protein_coding retained_intron MGP_LPJ_T0093407.1 MGP_LPJ_G0035033.1 mouse_genomes_project 9 97371936 97494165 + MGP_LPJ_P0093407 Xrn1 protein_coding protein_coding MGP_LPJ_T0093408.1 MGP_LPJ_G0035033.1 mouse_genomes_project 9 97371943 97499779 + MGP_LPJ_P0093408 Xrn1 protein_coding protein_coding MGP_LPJ_T0093409.1 MGP_LPJ_G0035033.1 mouse_genomes_project 9 97371969 97384945 + MGP_LPJ_P0093409 Xrn1 protein_coding protein_coding MGP_LPJ_T0093410.1 MGP_LPJ_G0035033.1 mouse_genomes_project 9 97372008 97418298 + Xrn1 protein_coding retained_intron MGP_LPJ_T0093411.1 MGP_LPJ_G0035033.1 mouse_genomes_project 9 97372035 97494165 + Xrn1 protein_coding retained_intron MGP_LPJ_T0093412.1 MGP_LPJ_G0035033.1 mouse_genomes_project 9 97372038 97429775 + MGP_LPJ_P0093412 Xrn1 protein_coding protein_coding MGP_LPJ_T0093413.1 MGP_LPJ_G0035033.1 mouse_genomes_project 9 97372045 97493947 + MGP_LPJ_P0093413 Xrn1 protein_coding unknown_likely_coding MGP_LPJ_T0093414.1 MGP_LPJ_G0035033.1 mouse_genomes_project 9 97388918 97392533 + Xrn1 protein_coding retained_intron MGP_LPJ_T0093415.1 MGP_LPJ_G0035033.1 mouse_genomes_project 9 97390690 97396200 + Xrn1 protein_coding retained_intron MGP_LPJ_T0093416.1 MGP_LPJ_G0035033.1 mouse_genomes_project 9 97435372 97438418 + Xrn1 protein_coding retained_intron MGP_LPJ_T0093374.1 MGP_LPJ_G0035027.1 mouse_genomes_project 9 96832957 96892056 - MGP_LPJ_P0093374 U2surp protein_coding protein_coding MGP_LPJ_T0093375.1 MGP_LPJ_G0035027.1 mouse_genomes_project 9 96837033 96892158 - MGP_LPJ_P0093375 U2surp protein_coding protein_coding MGP_LPJ_T0093376.1 MGP_LPJ_G0035027.1 mouse_genomes_project 9 96837414 96892157 - MGP_LPJ_P0093376 U2surp protein_coding nonsense_mediated_decay MGP_LPJ_T0093377.1 MGP_LPJ_G0035027.1 mouse_genomes_project 9 96837465 96892023 - MGP_LPJ_P0093377 U2surp protein_coding unknown_likely_coding MGP_LPJ_T0093378.1 MGP_LPJ_G0035027.1 mouse_genomes_project 9 96857101 96861313 - U2surp protein_coding retained_intron MGP_LPJ_T0093379.1 MGP_LPJ_G0035027.1 mouse_genomes_project 9 96872830 96892021 - MGP_LPJ_P0093379 U2surp protein_coding protein_coding MGP_LPJ_T0093380.1 MGP_LPJ_G0035027.1 mouse_genomes_project 9 96873480 96892018 - MGP_LPJ_P0093380 U2surp protein_coding protein_coding MGP_LPJ_T0093381.1 MGP_LPJ_G0035027.1 mouse_genomes_project 9 96882181 96892047 - U2surp protein_coding retained_intron MGP_LPJ_T0093382.1 MGP_LPJ_G0035027.1 mouse_genomes_project 9 96889195 96892041 - U2surp protein_coding retained_intron MGP_LPJ_T0094266.1 MGP_LPJ_G0035186.1 mouse_genomes_project 9 110600971 110614868 - MGP_LPJ_P0094266 Klhdc8b protein_coding protein_coding MGP_LPJ_T0094267.1 MGP_LPJ_G0035186.1 mouse_genomes_project 9 110600993 110606046 - Klhdc8b protein_coding retained_intron MGP_LPJ_T0094268.1 MGP_LPJ_G0035186.1 mouse_genomes_project 9 110600993 110604132 - Klhdc8b protein_coding retained_intron MGP_LPJ_T0094269.1 MGP_LPJ_G0035186.1 mouse_genomes_project 9 110600993 110605705 - MGP_LPJ_P0094269 Klhdc8b protein_coding protein_coding MGP_LPJ_T0094270.1 MGP_LPJ_G0035186.1 mouse_genomes_project 9 110601167 110605732 - MGP_LPJ_P0094270 Klhdc8b protein_coding protein_coding MGP_LPJ_T0094271.1 MGP_LPJ_G0035186.1 mouse_genomes_project 9 110601308 110614359 - MGP_LPJ_P0094271 Klhdc8b protein_coding protein_coding MGP_LPJ_T0094272.1 MGP_LPJ_G0035186.1 mouse_genomes_project 9 110601603 110603697 - Klhdc8b protein_coding processed_transcript MGP_LPJ_T0094273.1 MGP_LPJ_G0035186.1 mouse_genomes_project 9 110604582 110606094 - Klhdc8b protein_coding processed_transcript MGP_LPJ_T0094274.1 MGP_LPJ_G0035186.1 mouse_genomes_project 9 110604603 110606129 - Klhdc8b protein_coding retained_intron MGP_LPJ_T0094275.1 MGP_LPJ_G0035186.1 mouse_genomes_project 9 110605915 110614212 - Klhdc8b protein_coding processed_transcript MGP_LPJ_T0094276.1 MGP_LPJ_G0035186.1 mouse_genomes_project 9 110608000 110614212 - Klhdc8b protein_coding retained_intron MGP_LPJ_T0094277.1 MGP_LPJ_G0035186.1 mouse_genomes_project 9 110608002 110610217 - Klhdc8b protein_coding retained_intron MGP_LPJ_T0094278.1 MGP_LPJ_G0035186.1 mouse_genomes_project 9 110608193 110614356 - Klhdc8b protein_coding processed_transcript MGP_LPJ_T0094279.1 MGP_LPJ_G0035186.1 mouse_genomes_project 9 110611717 110613361 - Klhdc8b protein_coding retained_intron MGP_LPJ_T0094280.1 MGP_LPJ_G0035186.1 mouse_genomes_project 9 110612514 110614211 - Klhdc8b protein_coding retained_intron MGP_LPJ_T0016055.1 MGP_LPJ_G0014146.1 mouse_genomes_project 9 88208786 88210887 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099863.1 MGP_LPJ_G0038126.1 mouse_genomes_project 9 108864577 108864682 - Gm22384 snRNA snRNA MGP_LPJ_T0009270.1 MGP_LPJ_G0007450.1 mouse_genomes_project 9 61124684 61126081 - Gm10655 lincRNA lincRNA MGP_LPJ_T0009271.1 MGP_LPJ_G0007450.1 mouse_genomes_project 9 61124765 61125515 - Gm10655 lincRNA lincRNA MGP_LPJ_T0092165.1 MGP_LPJ_G0034733.1 mouse_genomes_project 9 54413588 54434164 - MGP_LPJ_P0092165 Chrnb4 protein_coding protein_coding MGP_LPJ_T0094920.1 MGP_LPJ_G0035309.1 mouse_genomes_project 9 122519922 122550860 + MGP_LPJ_P0094920 Acvr2b protein_coding protein_coding MGP_LPJ_T0094921.1 MGP_LPJ_G0035309.1 mouse_genomes_project 9 122519979 122550860 + MGP_LPJ_P0094921 Acvr2b protein_coding protein_coding MGP_LPJ_T0094922.1 MGP_LPJ_G0035309.1 mouse_genomes_project 9 122520024 122550820 + MGP_LPJ_P0094922 Acvr2b protein_coding unknown_likely_coding MGP_LPJ_T0002403.1 MGP_LPJ_G0002310.1 mouse_genomes_project 9 73115217 73115426 + TEC TEC MGP_LPJ_T0091605.1 MGP_LPJ_G0034535.1 mouse_genomes_project 9 37975654 37976671 + MGP_LPJ_P0091605 Olfr148 protein_coding protein_coding MGP_LPJ_T0094800.1 MGP_LPJ_G0035271.1 mouse_genomes_project 9 116646653 116711490 - MGP_LPJ_P0094800 Fbxl2 protein_coding protein_coding MGP_LPJ_T0094801.1 MGP_LPJ_G0035271.1 mouse_genomes_project 9 116660958 116711522 - MGP_LPJ_P0094801 Fbxl2 protein_coding protein_coding MGP_LPJ_T0094802.1 MGP_LPJ_G0035271.1 mouse_genomes_project 9 116663707 116711487 - MGP_LPJ_P0094802 Fbxl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0094803.1 MGP_LPJ_G0035271.1 mouse_genomes_project 9 116669008 116678350 - Fbxl2 protein_coding retained_intron MGP_LPJ_T0094804.1 MGP_LPJ_G0035271.1 mouse_genomes_project 9 116676240 116711535 - Fbxl2 protein_coding retained_intron MGP_LPJ_T0094805.1 MGP_LPJ_G0035271.1 mouse_genomes_project 9 116689933 116731146 - Fbxl2 protein_coding processed_transcript MGP_LPJ_T0005558.1 MGP_LPJ_G0004690.1 mouse_genomes_project 9 109517009 109518102 - Gm17118 antisense antisense MGP_LPJ_T0011059.1 MGP_LPJ_G0009177.1 mouse_genomes_project 9 10591608 10591709 + Gm22643 miRNA miRNA MGP_LPJ_T0091122.1 MGP_LPJ_G0034334.1 mouse_genomes_project 9 18384119 18385278 + MGP_LPJ_P0091122 Icam4 protein_coding protein_coding MGP_LPJ_T0092172.1 MGP_LPJ_G0034736.1 mouse_genomes_project 9 54615274 54680598 - Nrg4 protein_coding processed_transcript MGP_LPJ_T0092173.1 MGP_LPJ_G0034736.1 mouse_genomes_project 9 54615275 54680628 - MGP_LPJ_P0092173 Nrg4 protein_coding protein_coding MGP_LPJ_T0092174.1 MGP_LPJ_G0034736.1 mouse_genomes_project 9 54616274 54638214 - Nrg4 protein_coding processed_transcript MGP_LPJ_T0092175.1 MGP_LPJ_G0034736.1 mouse_genomes_project 9 54616350 54680590 - MGP_LPJ_P0092175 Nrg4 protein_coding nonsense_mediated_decay MGP_LPJ_T0092176.1 MGP_LPJ_G0034736.1 mouse_genomes_project 9 54616353 54725410 - MGP_LPJ_P0092176 Nrg4 protein_coding nonsense_mediated_decay MGP_LPJ_T0092177.1 MGP_LPJ_G0034736.1 mouse_genomes_project 9 54616354 54680575 - MGP_LPJ_P0092177 Nrg4 protein_coding nonsense_mediated_decay MGP_LPJ_T0092178.1 MGP_LPJ_G0034736.1 mouse_genomes_project 9 54616418 54680584 - Nrg4 protein_coding processed_transcript MGP_LPJ_T0092179.1 MGP_LPJ_G0034736.1 mouse_genomes_project 9 54619553 54680575 - MGP_LPJ_P0092179 Nrg4 protein_coding nonsense_mediated_decay MGP_LPJ_T0092180.1 MGP_LPJ_G0034736.1 mouse_genomes_project 9 54636452 54680605 - MGP_LPJ_P0092180 Nrg4 protein_coding protein_coding MGP_LPJ_T0092181.1 MGP_LPJ_G0034736.1 mouse_genomes_project 9 54637816 54725505 - Nrg4 protein_coding processed_transcript MGP_LPJ_T0092182.1 MGP_LPJ_G0034736.1 mouse_genomes_project 9 54645235 54680590 - Nrg4 protein_coding processed_transcript MGP_LPJ_T0092183.1 MGP_LPJ_G0034736.1 mouse_genomes_project 9 54654805 54680601 - Nrg4 protein_coding processed_transcript MGP_LPJ_T0092184.1 MGP_LPJ_G0034736.1 mouse_genomes_project 9 54704647 54723774 - Nrg4 protein_coding processed_transcript MGP_LPJ_T0016024.1 MGP_LPJ_G0014115.1 mouse_genomes_project 9 74146367 74146527 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098331.1 MGP_LPJ_G0036612.1 mouse_genomes_project 9 62343681 62343790 + n-R5s84 rRNA rRNA MGP_LPJ_T0091911.1 MGP_LPJ_G0034644.1 mouse_genomes_project 9 45181557 45183853 - MGP_LPJ_P0091911 Apoc3 protein_coding protein_coding MGP_LPJ_T0091912.1 MGP_LPJ_G0034644.1 mouse_genomes_project 9 45181675 45183892 - MGP_LPJ_P0091912 Apoc3 protein_coding protein_coding MGP_LPJ_T0091913.1 MGP_LPJ_G0034644.1 mouse_genomes_project 9 45181822 45184229 - MGP_LPJ_P0091913 Apoc3 protein_coding protein_coding MGP_LPJ_T0091914.1 MGP_LPJ_G0034644.1 mouse_genomes_project 9 45183025 45184062 - MGP_LPJ_P0091914 Apoc3 protein_coding protein_coding MGP_LPJ_T0091865.1 MGP_LPJ_G0034635.1 mouse_genomes_project 9 44674480 44746525 - MGP_LPJ_P0091865 Cep164 protein_coding protein_coding MGP_LPJ_T0091866.1 MGP_LPJ_G0034635.1 mouse_genomes_project 9 44675786 44746222 - MGP_LPJ_P0091866 Cep164 protein_coding unknown_likely_coding MGP_LPJ_T0091867.1 MGP_LPJ_G0034635.1 mouse_genomes_project 9 44678267 44680038 - Cep164 protein_coding retained_intron MGP_LPJ_T0091868.1 MGP_LPJ_G0034635.1 mouse_genomes_project 9 44687221 44714051 - MGP_LPJ_P0091868 Cep164 protein_coding protein_coding MGP_LPJ_T0005556.1 MGP_LPJ_G0004688.1 mouse_genomes_project 9 109364808 109366267 - Gm17041 antisense antisense MGP_LPJ_T0002459.1 MGP_LPJ_G0002365.1 mouse_genomes_project 9 102852354 102854238 + TEC TEC MGP_LPJ_T0092220.1 MGP_LPJ_G0034748.1 mouse_genomes_project 9 56294157 56297478 - MGP_LPJ_P0092220 Odf3l1 protein_coding protein_coding MGP_LPJ_T0093536.1 MGP_LPJ_G0035060.1 mouse_genomes_project 9 101095496 101190211 - MGP_LPJ_P0093536 Armc8 protein_coding protein_coding MGP_LPJ_T0093537.1 MGP_LPJ_G0035060.1 mouse_genomes_project 9 101137331 101189958 - MGP_LPJ_P0093537 Armc8 protein_coding protein_coding MGP_LPJ_T0093538.1 MGP_LPJ_G0035060.1 mouse_genomes_project 9 101171040 101189975 - Armc8 protein_coding retained_intron MGP_LPJ_T0009277.1 MGP_LPJ_G0007454.1 mouse_genomes_project 9 68456221 68456593 + Gm28195 lincRNA lincRNA MGP_LPJ_T0101126.1 MGP_LPJ_G0039389.1 mouse_genomes_project 9 97022401 97022511 + Gm25582 snoRNA snoRNA MGP_LPJ_T0009231.1 MGP_LPJ_G0007418.1 mouse_genomes_project 9 28935844 28937703 - Gm17508 lincRNA lincRNA MGP_LPJ_T0002499.1 MGP_LPJ_G0002405.1 mouse_genomes_project 9 123345037 123345671 + TEC TEC MGP_LPJ_T0005507.1 MGP_LPJ_G0004657.1 mouse_genomes_project 9 81087312 81089466 - Gm27227 antisense antisense MGP_LPJ_T0090849.1 MGP_LPJ_G0034220.1 mouse_genomes_project 9 4351578 4363065 + MGP_LPJ_P0090849 Mmp3 protein_coding protein_coding MGP_LPJ_T0101100.1 MGP_LPJ_G0039363.1 mouse_genomes_project 9 45543208 45543338 + Gm22659 snoRNA snoRNA MGP_LPJ_T0093348.1 MGP_LPJ_G0035018.1 mouse_genomes_project 9 93431068 93447741 + MGP_LPJ_P0093348 Plscr5 protein_coding protein_coding MGP_LPJ_T0094501.1 MGP_LPJ_G0035219.1 mouse_genomes_project 9 111450686 112021071 - MGP_LPJ_P0094501 protein_coding protein_coding MGP_LPJ_T0094506.1 MGP_LPJ_G0035219.1 mouse_genomes_project 9 111631250 111749786 - MGP_LPJ_P0094506 protein_coding protein_coding MGP_LPJ_T0091030.1 MGP_LPJ_G0034290.1 mouse_genomes_project 9 16629509 16630451 + MGP_LPJ_P0091030 Olfr845 protein_coding protein_coding MGP_LPJ_T0091330.1 MGP_LPJ_G0034414.1 mouse_genomes_project 9 28944629 29005320 - MGP_LPJ_P0091330 St14 protein_coding protein_coding MGP_LPJ_T0091331.1 MGP_LPJ_G0034414.1 mouse_genomes_project 9 28954581 29005263 - St14 protein_coding retained_intron MGP_LPJ_T0091332.1 MGP_LPJ_G0034414.1 mouse_genomes_project 9 28955181 28958098 - St14 protein_coding retained_intron MGP_LPJ_T0091333.1 MGP_LPJ_G0034414.1 mouse_genomes_project 9 28961315 29005263 - MGP_LPJ_P0091333 St14 protein_coding nonsense_mediated_decay MGP_LPJ_T0091423.1 MGP_LPJ_G0034435.1 mouse_genomes_project 9 33616451 33624980 + Pus3 protein_coding retained_intron MGP_LPJ_T0091424.1 MGP_LPJ_G0034435.1 mouse_genomes_project 9 33617304 33625243 + MGP_LPJ_P0091424 Pus3 protein_coding protein_coding MGP_LPJ_T0091425.1 MGP_LPJ_G0034435.1 mouse_genomes_project 9 33617310 33624681 + MGP_LPJ_P0091425 Pus3 protein_coding protein_coding MGP_LPJ_T0090865.1 MGP_LPJ_G0034229.1 mouse_genomes_project 9 4767326 4792604 - MGP_LPJ_P0090865 Birc3 protein_coding protein_coding MGP_LPJ_T0090866.1 MGP_LPJ_G0034229.1 mouse_genomes_project 9 4768321 4778666 - MGP_LPJ_P0090866 Birc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0090867.1 MGP_LPJ_G0034229.1 mouse_genomes_project 9 4774369 4792563 - MGP_LPJ_P0090867 Birc3 protein_coding protein_coding MGP_LPJ_T0090868.1 MGP_LPJ_G0034229.1 mouse_genomes_project 9 4779130 4792750 - MGP_LPJ_P0090868 Birc3 protein_coding protein_coding MGP_LPJ_T0090869.1 MGP_LPJ_G0034229.1 mouse_genomes_project 9 4779149 4792766 - MGP_LPJ_P0090869 Birc3 protein_coding protein_coding MGP_LPJ_T0090870.1 MGP_LPJ_G0034229.1 mouse_genomes_project 9 4784532 4792437 - Birc3 protein_coding processed_transcript MGP_LPJ_T0090871.1 MGP_LPJ_G0034229.1 mouse_genomes_project 9 4786987 4792477 - Birc3 protein_coding processed_transcript MGP_LPJ_T0101107.1 MGP_LPJ_G0039370.1 mouse_genomes_project 9 64111920 64112019 + Gm23136 snoRNA snoRNA MGP_LPJ_T0011113.1 MGP_LPJ_G0009231.1 mouse_genomes_project 9 110199006 110199092 + Mir7088 miRNA miRNA MGP_LPJ_T0018538.1 MGP_LPJ_G0015679.1 mouse_genomes_project 9 111003630 111004791 - Gm35025 processed_transcript lincRNA MGP_LPJ_T0018539.1 MGP_LPJ_G0015679.1 mouse_genomes_project 9 111003762 111004512 - Gm35025 processed_transcript lincRNA MGP_LPJ_T0018540.1 MGP_LPJ_G0015679.1 mouse_genomes_project 9 111003859 111004554 - Gm35025 processed_transcript TEC MGP_LPJ_T0092596.1 MGP_LPJ_G0034858.1 mouse_genomes_project 9 65569619 65597097 - MGP_LPJ_P0092596 Plekho2 protein_coding protein_coding MGP_LPJ_T0009310.1 MGP_LPJ_G0007481.1 mouse_genomes_project 9 92019783 92024932 - Gm28703 lincRNA lincRNA MGP_LPJ_T0094236.1 MGP_LPJ_G0035178.1 mouse_genomes_project 9 110441131 110445828 + Amt protein_coding processed_transcript MGP_LPJ_T0094237.1 MGP_LPJ_G0035178.1 mouse_genomes_project 9 110441148 110447194 + MGP_LPJ_P0094237 Amt protein_coding protein_coding MGP_LPJ_T0094238.1 MGP_LPJ_G0035178.1 mouse_genomes_project 9 110441188 110441810 + Amt protein_coding retained_intron MGP_LPJ_T0094239.1 MGP_LPJ_G0035178.1 mouse_genomes_project 9 110441200 110443722 + Amt protein_coding retained_intron MGP_LPJ_T0099859.1 MGP_LPJ_G0038122.1 mouse_genomes_project 9 104134662 104134765 + Gm22894 snRNA snRNA MGP_LPJ_T0009263.1 MGP_LPJ_G0007444.1 mouse_genomes_project 9 57042932 57049290 - Gm26631 lincRNA lincRNA MGP_LPJ_T0094863.1 MGP_LPJ_G0035295.1 mouse_genomes_project 9 121535534 121615499 + MGP_LPJ_P0094863 Golga4 protein_coding protein_coding MGP_LPJ_T0094864.1 MGP_LPJ_G0035295.1 mouse_genomes_project 9 121535702 121615504 + MGP_LPJ_P0094864 Golga4 protein_coding unknown_likely_coding MGP_LPJ_T0094700.1 MGP_LPJ_G0035256.1 mouse_genomes_project 9 113468862 113474153 - MGP_LPJ_P0094700 Rtp3 protein_coding protein_coding MGP_LPJ_T0094701.1 MGP_LPJ_G0035256.1 mouse_genomes_project 9 113470971 113475023 - MGP_LPJ_P0094701 Rtp3 protein_coding protein_coding MGP_LPJ_T0094531.1 MGP_LPJ_G0035228.1 mouse_genomes_project 9 112287570 112305826 + MGP_LPJ_P0094531 Cdc25a protein_coding protein_coding MGP_LPJ_T0094532.1 MGP_LPJ_G0035228.1 mouse_genomes_project 9 112287931 112293473 + MGP_LPJ_P0094532 Cdc25a protein_coding nonsense_mediated_decay MGP_LPJ_T0094533.1 MGP_LPJ_G0035228.1 mouse_genomes_project 9 112288297 112304579 + MGP_LPJ_P0094533 Cdc25a protein_coding protein_coding MGP_LPJ_T0094535.1 MGP_LPJ_G0035228.1 mouse_genomes_project 9 112296261 112301932 + Cdc25a protein_coding retained_intron MGP_LPJ_T0094536.1 MGP_LPJ_G0035228.1 mouse_genomes_project 9 112299647 112304299 + Cdc25a protein_coding retained_intron MGP_LPJ_T0094537.1 MGP_LPJ_G0035228.1 mouse_genomes_project 9 112300767 112301302 + Cdc25a protein_coding retained_intron MGP_LPJ_T0094957.1 MGP_LPJ_G0035325.1 mouse_genomes_project 9 123690562 123694638 + MGP_LPJ_P0094957 Eif1b protein_coding protein_coding MGP_LPJ_T0091545.1 MGP_LPJ_G0034487.1 mouse_genomes_project 9 36435135 36436077 + MGP_LPJ_P0091545 Olfr893 protein_coding protein_coding MGP_LPJ_T0016122.1 MGP_LPJ_G0014213.1 mouse_genomes_project 9 120011268 120011823 + processed_pseudogene processed_pseudogene MGP_LPJ_T0092154.1 MGP_LPJ_G0034730.1 mouse_genomes_project 9 54330909 54338263 + MGP_LPJ_P0092154 Psma4 protein_coding protein_coding MGP_LPJ_T0092155.1 MGP_LPJ_G0034730.1 mouse_genomes_project 9 54330917 54336622 + Psma4 protein_coding retained_intron MGP_LPJ_T0092156.1 MGP_LPJ_G0034730.1 mouse_genomes_project 9 54330924 54335152 + Psma4 protein_coding retained_intron MGP_LPJ_T0092157.1 MGP_LPJ_G0034730.1 mouse_genomes_project 9 54330934 54332926 + Psma4 protein_coding processed_transcript MGP_LPJ_T0092158.1 MGP_LPJ_G0034730.1 mouse_genomes_project 9 54330934 54337167 + MGP_LPJ_P0092158 Psma4 protein_coding protein_coding MGP_LPJ_T0092159.1 MGP_LPJ_G0034730.1 mouse_genomes_project 9 54330940 54338271 + MGP_LPJ_P0092159 Psma4 protein_coding unknown_likely_coding MGP_LPJ_T0092160.1 MGP_LPJ_G0034730.1 mouse_genomes_project 9 54331009 54333546 + Psma4 protein_coding retained_intron MGP_LPJ_T0092161.1 MGP_LPJ_G0034730.1 mouse_genomes_project 9 54331223 54336535 + MGP_LPJ_P0092161 Psma4 protein_coding protein_coding MGP_LPJ_T0091611.1 MGP_LPJ_G0034541.1 mouse_genomes_project 9 38193139 38195918 - MGP_LPJ_P0091611 Olfr968 protein_coding protein_coding MGP_LPJ_T0002438.1 MGP_LPJ_G0002344.1 mouse_genomes_project 9 92579683 92580423 - TEC TEC MGP_LPJ_T0016087.1 MGP_LPJ_G0014178.1 mouse_genomes_project 9 98534689 98534990 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091888.1 MGP_LPJ_G0034640.1 mouse_genomes_project 9 44859798 44878138 - MGP_LPJ_P0091888 Sidt2 protein_coding protein_coding MGP_LPJ_T0091889.1 MGP_LPJ_G0034640.1 mouse_genomes_project 9 44859816 44877878 - MGP_LPJ_P0091889 Sidt2 protein_coding protein_coding MGP_LPJ_T0091890.1 MGP_LPJ_G0034640.1 mouse_genomes_project 9 44861246 44864315 - MGP_LPJ_P0091890 Sidt2 protein_coding protein_coding MGP_LPJ_T0091891.1 MGP_LPJ_G0034640.1 mouse_genomes_project 9 44865267 44867577 - Sidt2 protein_coding retained_intron MGP_LPJ_T0091892.1 MGP_LPJ_G0034640.1 mouse_genomes_project 9 44865695 44867978 - Sidt2 protein_coding retained_intron MGP_LPJ_T0091893.1 MGP_LPJ_G0034640.1 mouse_genomes_project 9 44866517 44869731 - MGP_LPJ_P0091893 Sidt2 protein_coding nonsense_mediated_decay MGP_LPJ_T0091894.1 MGP_LPJ_G0034640.1 mouse_genomes_project 9 44867319 44870730 - Sidt2 protein_coding retained_intron MGP_LPJ_T0091895.1 MGP_LPJ_G0034640.1 mouse_genomes_project 9 44868147 44871194 - MGP_LPJ_P0091895 Sidt2 protein_coding protein_coding MGP_LPJ_T0091896.1 MGP_LPJ_G0034640.1 mouse_genomes_project 9 44868235 44878072 - MGP_LPJ_P0091896 Sidt2 protein_coding protein_coding MGP_LPJ_T0091897.1 MGP_LPJ_G0034640.1 mouse_genomes_project 9 44868297 44874744 - MGP_LPJ_P0091897 Sidt2 protein_coding protein_coding MGP_LPJ_T0091898.1 MGP_LPJ_G0034640.1 mouse_genomes_project 9 44868613 44874685 - MGP_LPJ_P0091898 Sidt2 protein_coding protein_coding MGP_LPJ_T0091899.1 MGP_LPJ_G0034640.1 mouse_genomes_project 9 44868650 44874917 - MGP_LPJ_P0091899 Sidt2 protein_coding nonsense_mediated_decay MGP_LPJ_T0091900.1 MGP_LPJ_G0034640.1 mouse_genomes_project 9 44868685 44871246 - MGP_LPJ_P0091900 Sidt2 protein_coding protein_coding MGP_LPJ_T0091901.1 MGP_LPJ_G0034640.1 mouse_genomes_project 9 44875354 44878125 - Sidt2 protein_coding retained_intron MGP_LPJ_T0016093.1 MGP_LPJ_G0014184.1 mouse_genomes_project 9 101580426 101581252 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101414.1 MGP_LPJ_G0039589.1 mouse_genomes_project 9 38986580 38987182 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101415.1 MGP_LPJ_G0039589.1 mouse_genomes_project 9 38986615 38987182 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0095084.1 MGP_LPJ_G0035366.1 mouse_genomes_project 9 126746148 126845773 + MGP_LPJ_P0095084 Lars2 protein_coding protein_coding MGP_LPJ_T0092223.1 MGP_LPJ_G0034751.1 mouse_genomes_project 9 56383918 56384842 + MGP_LPJ_P0092223 Imp3 protein_coding protein_coding MGP_LPJ_T0090916.1 MGP_LPJ_G0034244.1 mouse_genomes_project 9 10793227 10812427 - MGP_LPJ_P0090916 Cep57 protein_coding nonsense_mediated_decay MGP_LPJ_T0090917.1 MGP_LPJ_G0034244.1 mouse_genomes_project 9 10793230 10812488 - MGP_LPJ_P0090917 Cep57 protein_coding protein_coding MGP_LPJ_T0090918.1 MGP_LPJ_G0034244.1 mouse_genomes_project 9 10793260 10812391 - MGP_LPJ_P0090918 Cep57 protein_coding protein_coding MGP_LPJ_T0090919.1 MGP_LPJ_G0034244.1 mouse_genomes_project 9 10793984 10812461 - MGP_LPJ_P0090919 Cep57 protein_coding nonsense_mediated_decay MGP_LPJ_T0090920.1 MGP_LPJ_G0034244.1 mouse_genomes_project 9 10794042 10812336 - MGP_LPJ_P0090920 Cep57 protein_coding protein_coding MGP_LPJ_T0090921.1 MGP_LPJ_G0034244.1 mouse_genomes_project 9 10794182 10795850 - Cep57 protein_coding retained_intron MGP_LPJ_T0090922.1 MGP_LPJ_G0034244.1 mouse_genomes_project 9 10794251 10804101 - MGP_LPJ_P0090922 Cep57 protein_coding protein_coding MGP_LPJ_T0090923.1 MGP_LPJ_G0034244.1 mouse_genomes_project 9 10796155 10804345 - MGP_LPJ_P0090923 Cep57 protein_coding protein_coding MGP_LPJ_T0090924.1 MGP_LPJ_G0034244.1 mouse_genomes_project 9 10798491 10804381 - Cep57 protein_coding retained_intron MGP_LPJ_T0090925.1 MGP_LPJ_G0034244.1 mouse_genomes_project 9 10798867 10812489 - MGP_LPJ_P0090925 Cep57 protein_coding nonsense_mediated_decay MGP_LPJ_T0090926.1 MGP_LPJ_G0034244.1 mouse_genomes_project 9 10798882 10801833 - Cep57 protein_coding retained_intron MGP_LPJ_T0005436.1 MGP_LPJ_G0004609.1 mouse_genomes_project 9 6141898 6169313 + Gm16833 antisense antisense MGP_LPJ_T0005437.1 MGP_LPJ_G0004609.1 mouse_genomes_project 9 6169112 6169313 + Gm16833 antisense antisense MGP_LPJ_T0092746.1 MGP_LPJ_G0034890.1 mouse_genomes_project 9 70293862 70305238 + MGP_LPJ_P0092746 Gtf2a2 protein_coding protein_coding MGP_LPJ_T0092747.1 MGP_LPJ_G0034890.1 mouse_genomes_project 9 70293866 70305110 + Gtf2a2 protein_coding retained_intron MGP_LPJ_T0092748.1 MGP_LPJ_G0034890.1 mouse_genomes_project 9 70293877 70305109 + MGP_LPJ_P0092748 Gtf2a2 protein_coding protein_coding MGP_LPJ_T0092749.1 MGP_LPJ_G0034890.1 mouse_genomes_project 9 70293878 70305110 + MGP_LPJ_P0092749 Gtf2a2 protein_coding nonsense_mediated_decay MGP_LPJ_T0092750.1 MGP_LPJ_G0034890.1 mouse_genomes_project 9 70293880 70304887 + Gtf2a2 protein_coding processed_transcript MGP_LPJ_T0092751.1 MGP_LPJ_G0034890.1 mouse_genomes_project 9 70293883 70300593 + Gtf2a2 protein_coding retained_intron MGP_LPJ_T0092752.1 MGP_LPJ_G0034890.1 mouse_genomes_project 9 70293883 70305109 + MGP_LPJ_P0092752 Gtf2a2 protein_coding protein_coding MGP_LPJ_T0092753.1 MGP_LPJ_G0034890.1 mouse_genomes_project 9 70293886 70301846 + MGP_LPJ_P0092753 Gtf2a2 protein_coding protein_coding MGP_LPJ_T0092754.1 MGP_LPJ_G0034890.1 mouse_genomes_project 9 70293891 70301841 + Gtf2a2 protein_coding retained_intron MGP_LPJ_T0092755.1 MGP_LPJ_G0034890.1 mouse_genomes_project 9 70293896 70296951 + Gtf2a2 protein_coding retained_intron MGP_LPJ_T0092756.1 MGP_LPJ_G0034890.1 mouse_genomes_project 9 70293907 70301858 + MGP_LPJ_P0092756 Gtf2a2 protein_coding protein_coding MGP_LPJ_T0092757.1 MGP_LPJ_G0034890.1 mouse_genomes_project 9 70293955 70305110 + MGP_LPJ_P0092757 Gtf2a2 protein_coding nonsense_mediated_decay MGP_LPJ_T0092758.1 MGP_LPJ_G0034890.1 mouse_genomes_project 9 70297124 70305109 + Gtf2a2 protein_coding processed_transcript MGP_LPJ_T0092759.1 MGP_LPJ_G0034890.1 mouse_genomes_project 9 70298131 70302282 + Gtf2a2 protein_coding retained_intron MGP_LPJ_T0092760.1 MGP_LPJ_G0034890.1 mouse_genomes_project 9 70301419 70305109 + Gtf2a2 protein_coding retained_intron MGP_LPJ_T0101146.1 MGP_LPJ_G0039409.1 mouse_genomes_project 9 126521675 126521808 + Gm23323 snoRNA snoRNA MGP_LPJ_T0018549.1 MGP_LPJ_G0015684.1 mouse_genomes_project 9 127139762 127161571 + Gm17200 processed_transcript processed_transcript MGP_LPJ_T0094793.1 MGP_LPJ_G0035268.1 mouse_genomes_project 9 116411961 116461567 + MGP_LPJ_P0094793 unknown_likely_coding unknown_likely_coding MGP_LPJ_T0094730.1 MGP_LPJ_G0035260.1 mouse_genomes_project 9 113732417 113774425 - MGP_LPJ_P0094730 Mlh1 protein_coding nonsense_mediated_decay MGP_LPJ_T0094731.1 MGP_LPJ_G0035260.1 mouse_genomes_project 9 113732441 113774669 - MGP_LPJ_P0094731 Mlh1 protein_coding protein_coding MGP_LPJ_T0094732.1 MGP_LPJ_G0035260.1 mouse_genomes_project 9 113732718 113734803 - Mlh1 protein_coding retained_intron MGP_LPJ_T0094733.1 MGP_LPJ_G0035260.1 mouse_genomes_project 9 113734050 113735115 - Mlh1 protein_coding retained_intron MGP_LPJ_T0094734.1 MGP_LPJ_G0035260.1 mouse_genomes_project 9 113734068 113774479 - Mlh1 protein_coding retained_intron MGP_LPJ_T0094735.1 MGP_LPJ_G0035260.1 mouse_genomes_project 9 113745460 113752315 - Mlh1 protein_coding retained_intron MGP_LPJ_T0094736.1 MGP_LPJ_G0035260.1 mouse_genomes_project 9 113745746 113761063 - MGP_LPJ_P0094736 Mlh1 protein_coding protein_coding MGP_LPJ_T0094737.1 MGP_LPJ_G0035260.1 mouse_genomes_project 9 113753777 113765093 - MGP_LPJ_P0094737 Mlh1 protein_coding nonsense_mediated_decay MGP_LPJ_T0094738.1 MGP_LPJ_G0035260.1 mouse_genomes_project 9 113760759 113774413 - Mlh1 protein_coding processed_transcript MGP_LPJ_T0091959.1 MGP_LPJ_G0034661.1 mouse_genomes_project 9 48104532 48139121 - MGP_LPJ_P0091959 Htr3b protein_coding protein_coding MGP_LPJ_T0091265.1 MGP_LPJ_G0034391.1 mouse_genomes_project 9 22126268 22267485 - MGP_LPJ_P0091265 Dpy19l2 protein_coding protein_coding MGP_LPJ_T0015975.1 MGP_LPJ_G0014066.1 mouse_genomes_project 9 17240660 17241064 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091738.1 MGP_LPJ_G0034591.1 mouse_genomes_project 9 43016692 43020843 - MGP_LPJ_P0091738 Pdzd3 protein_coding protein_coding MGP_LPJ_T0091838.1 MGP_LPJ_G0034623.1 mouse_genomes_project 9 43891190 43916639 + MGP_LPJ_P0091838 Mpzl3 protein_coding protein_coding MGP_LPJ_T0091839.1 MGP_LPJ_G0034623.1 mouse_genomes_project 9 43891192 43901225 + Mpzl3 protein_coding retained_intron MGP_LPJ_T0091840.1 MGP_LPJ_G0034623.1 mouse_genomes_project 9 43891213 43902590 + MGP_LPJ_P0091840 Mpzl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0091841.1 MGP_LPJ_G0034623.1 mouse_genomes_project 9 43895303 43901709 + Mpzl3 protein_coding retained_intron MGP_LPJ_T0091842.1 MGP_LPJ_G0034623.1 mouse_genomes_project 9 43907974 43914365 + Mpzl3 protein_coding retained_intron MGP_LPJ_T0092226.1 MGP_LPJ_G0034754.1 mouse_genomes_project 9 56532502 56549922 + MGP_LPJ_P0092226 Sin3a protein_coding protein_coding MGP_LPJ_T0092227.1 MGP_LPJ_G0034754.1 mouse_genomes_project 9 56535800 56591030 + MGP_LPJ_P0092227 Sin3a protein_coding protein_coding MGP_LPJ_T0092228.1 MGP_LPJ_G0034754.1 mouse_genomes_project 9 56536838 56591028 + MGP_LPJ_P0092228 Sin3a protein_coding protein_coding MGP_LPJ_T0092229.1 MGP_LPJ_G0034754.1 mouse_genomes_project 9 56536861 56591030 + MGP_LPJ_P0092229 Sin3a protein_coding protein_coding MGP_LPJ_T0092230.1 MGP_LPJ_G0034754.1 mouse_genomes_project 9 56537090 56557170 + MGP_LPJ_P0092230 Sin3a protein_coding protein_coding MGP_LPJ_T0092231.1 MGP_LPJ_G0034754.1 mouse_genomes_project 9 56541620 56591030 + MGP_LPJ_P0092231 Sin3a protein_coding protein_coding MGP_LPJ_T0092232.1 MGP_LPJ_G0034754.1 mouse_genomes_project 9 56547007 56591030 + MGP_LPJ_P0092232 Sin3a protein_coding protein_coding MGP_LPJ_T0092233.1 MGP_LPJ_G0034754.1 mouse_genomes_project 9 56557014 56559647 + Sin3a protein_coding retained_intron MGP_LPJ_T0092234.1 MGP_LPJ_G0034754.1 mouse_genomes_project 9 56576114 56587852 + Sin3a protein_coding retained_intron MGP_LPJ_T0095112.1 MGP_LPJ_G0035377.1 mouse_genomes_project 9 127447752 127449212 - MGP_LPJ_P0095112 Ccr1l1 protein_coding protein_coding MGP_LPJ_T0005532.1 MGP_LPJ_G0004670.1 mouse_genomes_project 9 98505131 98511205 + Gm16010 antisense antisense MGP_LPJ_T0005533.1 MGP_LPJ_G0004670.1 mouse_genomes_project 9 98506639 98507611 + Gm16010 antisense antisense MGP_LPJ_T0092264.1 MGP_LPJ_G0034760.1 mouse_genomes_project 9 56916779 56944804 - MGP_LPJ_P0092264 Ppcdc protein_coding protein_coding MGP_LPJ_T0094661.1 MGP_LPJ_G0035243.1 mouse_genomes_project 9 113183572 113213022 - MGP_LPJ_P0094661 Pth1r protein_coding protein_coding MGP_LPJ_T0094662.1 MGP_LPJ_G0035243.1 mouse_genomes_project 9 113183575 113209586 - MGP_LPJ_P0094662 Pth1r protein_coding protein_coding MGP_LPJ_T0094663.1 MGP_LPJ_G0035243.1 mouse_genomes_project 9 113183629 113207472 - MGP_LPJ_P0094663 Pth1r protein_coding protein_coding MGP_LPJ_T0094664.1 MGP_LPJ_G0035243.1 mouse_genomes_project 9 113188923 113212956 - MGP_LPJ_P0094664 Pth1r protein_coding protein_coding MGP_LPJ_T0094665.1 MGP_LPJ_G0035243.1 mouse_genomes_project 9 113193065 113213045 - MGP_LPJ_P0094665 Pth1r protein_coding protein_coding MGP_LPJ_T0095124.1 MGP_LPJ_G0035382.1 mouse_genomes_project 9 127822315 127843105 - MGP_LPJ_P0095124 2010315B03Rik protein_coding protein_coding MGP_LPJ_T0095125.1 MGP_LPJ_G0035382.1 mouse_genomes_project 9 127824133 127843051 - MGP_LPJ_P0095125 2010315B03Rik protein_coding protein_coding MGP_LPJ_T0095126.1 MGP_LPJ_G0035382.1 mouse_genomes_project 9 127824323 127842312 - MGP_LPJ_P0095126 2010315B03Rik protein_coding protein_coding MGP_LPJ_T0095127.1 MGP_LPJ_G0035382.1 mouse_genomes_project 9 127824335 127843080 - MGP_LPJ_P0095127 2010315B03Rik protein_coding protein_coding MGP_LPJ_T0095128.1 MGP_LPJ_G0035382.1 mouse_genomes_project 9 127830959 127843080 - 2010315B03Rik protein_coding processed_transcript MGP_LPJ_T0009223.1 MGP_LPJ_G0007410.1 mouse_genomes_project 9 17936342 17941060 - Gm26521 lincRNA lincRNA MGP_LPJ_T0091197.1 MGP_LPJ_G0034362.1 mouse_genomes_project 9 19235657 19237498 + MGP_LPJ_P0091197 Angptl8 protein_coding protein_coding MGP_LPJ_T0091175.1 MGP_LPJ_G0034353.1 mouse_genomes_project 9 18905613 18926852 + MGP_LPJ_P0091175 AB124611 protein_coding protein_coding MGP_LPJ_T0091176.1 MGP_LPJ_G0034353.1 mouse_genomes_project 9 18905638 18926845 + MGP_LPJ_P0091176 AB124611 protein_coding protein_coding MGP_LPJ_T0091177.1 MGP_LPJ_G0034353.1 mouse_genomes_project 9 18905665 18926850 + MGP_LPJ_P0091177 AB124611 protein_coding nonsense_mediated_decay MGP_LPJ_T0099829.1 MGP_LPJ_G0038092.1 mouse_genomes_project 9 63004442 63004549 + Gm25064 snRNA snRNA MGP_LPJ_T0092965.1 MGP_LPJ_G0034933.1 mouse_genomes_project 9 75925066 75946439 - Mapk6 protein_coding processed_transcript MGP_LPJ_T0092966.1 MGP_LPJ_G0034933.1 mouse_genomes_project 9 75944321 75967808 - MGP_LPJ_P0092966 Mapk6 protein_coding protein_coding MGP_LPJ_T0092967.1 MGP_LPJ_G0034933.1 mouse_genomes_project 9 75944323 75968454 - MGP_LPJ_P0092967 Mapk6 protein_coding protein_coding MGP_LPJ_T0092968.1 MGP_LPJ_G0034933.1 mouse_genomes_project 9 75950415 75954933 - Mapk6 protein_coding retained_intron MGP_LPJ_T0092969.1 MGP_LPJ_G0034933.1 mouse_genomes_project 9 75951060 75968445 - Mapk6 protein_coding retained_intron MGP_LPJ_T0092970.1 MGP_LPJ_G0034933.1 mouse_genomes_project 9 75955584 75968032 - Mapk6 protein_coding processed_transcript MGP_LPJ_T0092971.1 MGP_LPJ_G0034933.1 mouse_genomes_project 9 75955737 75968434 - Mapk6 protein_coding processed_transcript MGP_LPJ_T0098340.1 MGP_LPJ_G0036621.1 mouse_genomes_project 9 104814586 104814690 - n-R5s89 rRNA rRNA MGP_LPJ_T0094125.1 MGP_LPJ_G0035160.1 mouse_genomes_project 9 110017213 110030721 + MGP_LPJ_P0094125 Mst1r protein_coding protein_coding MGP_LPJ_T0094126.1 MGP_LPJ_G0035160.1 mouse_genomes_project 9 110017247 110030719 + MGP_LPJ_P0094126 Mst1r protein_coding nonsense_mediated_decay MGP_LPJ_T0094127.1 MGP_LPJ_G0035160.1 mouse_genomes_project 9 110025345 110026071 + Mst1r protein_coding retained_intron MGP_LPJ_T0094128.1 MGP_LPJ_G0035160.1 mouse_genomes_project 9 110026566 110027247 + Mst1r protein_coding retained_intron MGP_LPJ_T0018534.1 MGP_LPJ_G0015677.1 mouse_genomes_project 9 110168568 110175490 + Gm20529 processed_transcript processed_transcript MGP_LPJ_T0002498.1 MGP_LPJ_G0002404.1 mouse_genomes_project 9 121421361 121422199 - TEC TEC MGP_LPJ_T0091594.1 MGP_LPJ_G0034530.1 mouse_genomes_project 9 37843597 37854108 - MGP_LPJ_P0091594 Olfr44 protein_coding protein_coding MGP_LPJ_T0009288.1 MGP_LPJ_G0007464.1 mouse_genomes_project 9 75380152 75382627 - Gm28182 lincRNA lincRNA MGP_LPJ_T0091228.1 MGP_LPJ_G0034377.1 mouse_genomes_project 9 19576848 19581960 - MGP_LPJ_P0091228 Acp5 protein_coding protein_coding MGP_LPJ_T0091229.1 MGP_LPJ_G0034377.1 mouse_genomes_project 9 19576848 19585844 - MGP_LPJ_P0091229 Acp5 protein_coding protein_coding MGP_LPJ_T0091230.1 MGP_LPJ_G0034377.1 mouse_genomes_project 9 19576848 19580694 - MGP_LPJ_P0091230 Acp5 protein_coding protein_coding MGP_LPJ_T0090944.1 MGP_LPJ_G0034253.1 mouse_genomes_project 9 11808710 11816071 - MGP_LPJ_P0090944 1700012B09Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0090945.1 MGP_LPJ_G0034253.1 mouse_genomes_project 9 11808716 11825403 - MGP_LPJ_P0090945 1700012B09Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0090946.1 MGP_LPJ_G0034253.1 mouse_genomes_project 9 11808718 11816027 - MGP_LPJ_P0090946 1700012B09Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0090947.1 MGP_LPJ_G0034253.1 mouse_genomes_project 9 11810314 11825420 - MGP_LPJ_P0090947 1700012B09Rik protein_coding protein_coding MGP_LPJ_T0090948.1 MGP_LPJ_G0034253.1 mouse_genomes_project 9 11810314 11825403 - MGP_LPJ_P0090948 1700012B09Rik protein_coding protein_coding MGP_LPJ_T0099842.1 MGP_LPJ_G0038105.1 mouse_genomes_project 9 72613137 72613241 - Gm25163 snRNA snRNA MGP_LPJ_T0092130.1 MGP_LPJ_G0034719.1 mouse_genomes_project 9 53900243 53906278 + MGP_LPJ_P0092130 Sh2d7 protein_coding protein_coding MGP_LPJ_T0092131.1 MGP_LPJ_G0034719.1 mouse_genomes_project 9 53900247 53904912 + MGP_LPJ_P0092131 Sh2d7 protein_coding protein_coding MGP_LPJ_T0091669.1 MGP_LPJ_G0034570.1 mouse_genomes_project 9 40559571 40725538 - MGP_LPJ_P0091669 Sorl1 protein_coding protein_coding MGP_LPJ_T0091670.1 MGP_LPJ_G0034570.1 mouse_genomes_project 9 40564577 40568907 - Sorl1 protein_coding retained_intron MGP_LPJ_T0091671.1 MGP_LPJ_G0034570.1 mouse_genomes_project 9 40571907 40578898 - Sorl1 protein_coding retained_intron MGP_LPJ_T0091672.1 MGP_LPJ_G0034570.1 mouse_genomes_project 9 40578835 40580165 - Sorl1 protein_coding processed_transcript MGP_LPJ_T0015988.1 MGP_LPJ_G0014079.1 mouse_genomes_project 9 33341655 33341973 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018523.1 MGP_LPJ_G0015673.1 mouse_genomes_project 9 100121305 100122669 - 4930579K19Rik processed_transcript lincRNA MGP_LPJ_T0018524.1 MGP_LPJ_G0015673.1 mouse_genomes_project 9 100121536 100122688 - 4930579K19Rik processed_transcript TEC MGP_LPJ_T0018525.1 MGP_LPJ_G0015673.1 mouse_genomes_project 9 100122036 100122688 - 4930579K19Rik processed_transcript processed_transcript MGP_LPJ_T0000380.1 MGP_LPJ_G0000318.1 mouse_genomes_project 9 126465380 126465447 + mt-Tc Mt_tRNA Mt_tRNA MGP_LPJ_T0011756.1 MGP_LPJ_G0009874.1 mouse_genomes_project 9 89637648 89637938 + Gm26461 misc_RNA misc_RNA MGP_LPJ_T0093751.1 MGP_LPJ_G0035103.1 mouse_genomes_project 9 107343659 107353980 + MGP_LPJ_P0093751 Aste1 protein_coding protein_coding MGP_LPJ_T0093752.1 MGP_LPJ_G0035103.1 mouse_genomes_project 9 107343667 107350414 + Aste1 protein_coding retained_intron MGP_LPJ_T0093753.1 MGP_LPJ_G0035103.1 mouse_genomes_project 9 107343682 107353689 + Aste1 protein_coding retained_intron MGP_LPJ_T0093754.1 MGP_LPJ_G0035103.1 mouse_genomes_project 9 107343811 107349884 + MGP_LPJ_P0093754 Aste1 protein_coding protein_coding MGP_LPJ_T0093755.1 MGP_LPJ_G0035103.1 mouse_genomes_project 9 107345487 107353395 + MGP_LPJ_P0093755 Aste1 protein_coding protein_coding MGP_LPJ_T0093756.1 MGP_LPJ_G0035103.1 mouse_genomes_project 9 107346085 107353550 + MGP_LPJ_P0093756 Aste1 protein_coding nonsense_mediated_decay MGP_LPJ_T0093757.1 MGP_LPJ_G0035103.1 mouse_genomes_project 9 107346085 107358801 + MGP_LPJ_P0093757 Aste1 protein_coding nonsense_mediated_decay MGP_LPJ_T0093758.1 MGP_LPJ_G0035103.1 mouse_genomes_project 9 107349061 107353550 + Aste1 protein_coding processed_transcript MGP_LPJ_T0093759.1 MGP_LPJ_G0035103.1 mouse_genomes_project 9 107349745 107353980 + MGP_LPJ_P0093759 Aste1 protein_coding protein_coding MGP_LPJ_T0095029.1 MGP_LPJ_G0035346.1 mouse_genomes_project 9 125259065 125288402 + MGP_LPJ_P0095029 Fam198a protein_coding protein_coding MGP_LPJ_T0009255.1 MGP_LPJ_G0007438.1 mouse_genomes_project 9 45914899 45932434 + 2900052N01Rik lincRNA lincRNA MGP_LPJ_T0009256.1 MGP_LPJ_G0007438.1 mouse_genomes_project 9 45915009 45932434 + 2900052N01Rik lincRNA lincRNA MGP_LPJ_T0009257.1 MGP_LPJ_G0007438.1 mouse_genomes_project 9 45915033 45927637 + 2900052N01Rik lincRNA lincRNA MGP_LPJ_T0002396.1 MGP_LPJ_G0002303.1 mouse_genomes_project 9 72711346 72712905 + TEC TEC MGP_LPJ_T0015985.1 MGP_LPJ_G0014076.1 mouse_genomes_project 9 30607262 30607680 + processed_pseudogene processed_pseudogene MGP_LPJ_T0102475.1 MGP_LPJ_G0040511.1 mouse_genomes_project 9 17240623 17241064 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0091184.1 MGP_LPJ_G0034355.1 mouse_genomes_project 9 18972056 18976178 - MGP_LPJ_P0091184 Yipf2 protein_coding protein_coding MGP_LPJ_T0091185.1 MGP_LPJ_G0034355.1 mouse_genomes_project 9 18972056 18976178 - MGP_LPJ_P0091185 Yipf2 protein_coding protein_coding MGP_LPJ_T0091186.1 MGP_LPJ_G0034355.1 mouse_genomes_project 9 18972056 18976178 - MGP_LPJ_P0091186 Yipf2 protein_coding protein_coding MGP_LPJ_T0095039.1 MGP_LPJ_G0035349.1 mouse_genomes_project 9 125494092 125619605 - MGP_LPJ_P0095039 Ano10 protein_coding protein_coding MGP_LPJ_T0092773.1 MGP_LPJ_G0034898.1 mouse_genomes_project 9 70993137 70994743 + MGP_LPJ_P0092773 Gm10642 protein_coding protein_coding MGP_LPJ_T0011075.1 MGP_LPJ_G0009193.1 mouse_genomes_project 9 40152342 40152419 + Mir125b-1 miRNA miRNA MGP_LPJ_T0091559.1 MGP_LPJ_G0034501.1 mouse_genomes_project 9 36767342 36768282 + MGP_LPJ_P0091559 Olfr911-ps1 protein_coding protein_coding MGP_LPJ_T0016075.1 MGP_LPJ_G0014166.1 mouse_genomes_project 9 94253174 94253481 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005573.1 MGP_LPJ_G0004702.1 mouse_genomes_project 9 111820982 111841421 + antisense antisense MGP_LPJ_T0091903.1 MGP_LPJ_G0034642.1 mouse_genomes_project 9 44938940 45172766 + MGP_LPJ_P0091903 Sik3 protein_coding protein_coding MGP_LPJ_T0091904.1 MGP_LPJ_G0034642.1 mouse_genomes_project 9 44938984 45170847 + MGP_LPJ_P0091904 Sik3 protein_coding protein_coding MGP_LPJ_T0091905.1 MGP_LPJ_G0034642.1 mouse_genomes_project 9 44939120 45169806 + MGP_LPJ_P0091905 Sik3 protein_coding protein_coding MGP_LPJ_T0091906.1 MGP_LPJ_G0034642.1 mouse_genomes_project 9 44939152 45148836 + MGP_LPJ_P0091906 Sik3 protein_coding protein_coding MGP_LPJ_T0091907.1 MGP_LPJ_G0034642.1 mouse_genomes_project 9 45095060 45172760 + Sik3 protein_coding processed_transcript MGP_LPJ_T0091908.1 MGP_LPJ_G0034642.1 mouse_genomes_project 9 45168142 45169806 + MGP_LPJ_P0091908 Sik3 protein_coding protein_coding MGP_LPJ_T0002378.1 MGP_LPJ_G0002285.1 mouse_genomes_project 9 30953584 30954932 + TEC TEC MGP_LPJ_T0091287.1 MGP_LPJ_G0034399.1 mouse_genomes_project 9 24464416 24513828 - MGP_LPJ_P0091287 Glb1l3 protein_coding protein_coding MGP_LPJ_T0011102.1 MGP_LPJ_G0009220.1 mouse_genomes_project 9 73430796 73430918 + Gm27353 miRNA miRNA MGP_LPJ_T0090816.1 MGP_LPJ_G0034211.1 mouse_genomes_project 9 2079212 2087983 + MGP_LPJ_P0090816 Casp1 protein_coding protein_coding MGP_LPJ_T0091044.1 MGP_LPJ_G0034304.1 mouse_genomes_project 9 17230116 17235270 + MGP_LPJ_P0091044 Olfr77 protein_coding protein_coding MGP_LPJ_T0005452.1 MGP_LPJ_G0004619.1 mouse_genomes_project 9 32979221 32990603 - Kirrel3os antisense antisense MGP_LPJ_T0101075.1 MGP_LPJ_G0039338.1 mouse_genomes_project 9 12399513 12399650 + Gm25791 snoRNA snoRNA MGP_LPJ_T0011104.1 MGP_LPJ_G0009222.1 mouse_genomes_project 9 90955101 90955170 - Mir184 miRNA miRNA MGP_LPJ_T0101071.1 MGP_LPJ_G0039334.1 mouse_genomes_project 9 1884336 1884471 + Gm24896 snoRNA snoRNA MGP_LPJ_T0093747.1 MGP_LPJ_G0035102.1 mouse_genomes_project 9 107101516 107343792 - MGP_LPJ_P0093747 Nek11 protein_coding protein_coding MGP_LPJ_T0093748.1 MGP_LPJ_G0035102.1 mouse_genomes_project 9 107103654 107341305 - MGP_LPJ_P0093748 Nek11 protein_coding nonsense_mediated_decay MGP_LPJ_T0093749.1 MGP_LPJ_G0035102.1 mouse_genomes_project 9 107183904 107343555 - MGP_LPJ_P0093749 Nek11 protein_coding nonsense_mediated_decay MGP_LPJ_T0093750.1 MGP_LPJ_G0035102.1 mouse_genomes_project 9 107237077 107343526 - MGP_LPJ_P0093750 Nek11 protein_coding protein_coding MGP_LPJ_T0005508.1 MGP_LPJ_G0004658.1 mouse_genomes_project 9 82435032 82448501 + D430036J16Rik antisense antisense MGP_LPJ_T0005509.1 MGP_LPJ_G0004658.1 mouse_genomes_project 9 82435411 82449028 + D430036J16Rik antisense antisense MGP_LPJ_T0005510.1 MGP_LPJ_G0004658.1 mouse_genomes_project 9 82435514 82448067 + D430036J16Rik antisense antisense MGP_LPJ_T0005511.1 MGP_LPJ_G0004658.1 mouse_genomes_project 9 82435839 82448957 + D430036J16Rik antisense antisense MGP_LPJ_T0005512.1 MGP_LPJ_G0004658.1 mouse_genomes_project 9 82435899 82448224 + D430036J16Rik antisense antisense MGP_LPJ_T0094930.1 MGP_LPJ_G0035313.1 mouse_genomes_project 9 122893667 122971425 - MGP_LPJ_P0094930 Scn11a protein_coding protein_coding MGP_LPJ_T0005535.1 MGP_LPJ_G0004672.1 mouse_genomes_project 9 98866618 98893697 + Gm15891 antisense antisense MGP_LPJ_T0093063.1 MGP_LPJ_G0034963.1 mouse_genomes_project 9 79182917 79183851 - MGP_LPJ_P0093063 Gm17324 protein_coding protein_coding MGP_LPJ_T0093483.1 MGP_LPJ_G0035044.1 mouse_genomes_project 9 98969630 99575836 - MGP_LPJ_P0093483 Clstn2 protein_coding protein_coding MGP_LPJ_T0093484.1 MGP_LPJ_G0035044.1 mouse_genomes_project 9 98978494 99575638 - MGP_LPJ_P0093484 Clstn2 protein_coding protein_coding MGP_LPJ_T0101419.1 MGP_LPJ_G0039592.1 mouse_genomes_project 9 79160198 79163148 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0101420.1 MGP_LPJ_G0039592.1 mouse_genomes_project 9 79161642 79163728 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101421.1 MGP_LPJ_G0039592.1 mouse_genomes_project 9 79162193 79164570 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0091313.1 MGP_LPJ_G0034409.1 mouse_genomes_project 9 26722701 27742569 - MGP_LPJ_P0091313 Ntm protein_coding protein_coding MGP_LPJ_T0091314.1 MGP_LPJ_G0034409.1 mouse_genomes_project 9 26723932 27144302 - MGP_LPJ_P0091314 Ntm protein_coding protein_coding MGP_LPJ_T0091315.1 MGP_LPJ_G0034409.1 mouse_genomes_project 9 26724151 26742110 - MGP_LPJ_P0091315 Ntm protein_coding protein_coding MGP_LPJ_T0091316.1 MGP_LPJ_G0034409.1 mouse_genomes_project 9 26724413 26742110 - MGP_LPJ_P0091316 Ntm protein_coding protein_coding MGP_LPJ_T0091317.1 MGP_LPJ_G0034409.1 mouse_genomes_project 9 26736928 27143834 - MGP_LPJ_P0091317 Ntm protein_coding protein_coding MGP_LPJ_T0091318.1 MGP_LPJ_G0034409.1 mouse_genomes_project 9 26737054 26915383 - Ntm protein_coding processed_transcript MGP_LPJ_T0091319.1 MGP_LPJ_G0034409.1 mouse_genomes_project 9 26737077 26837633 - Ntm protein_coding processed_transcript MGP_LPJ_T0091320.1 MGP_LPJ_G0034409.1 mouse_genomes_project 9 26741088 27742570 - Ntm protein_coding retained_intron MGP_LPJ_T0091321.1 MGP_LPJ_G0034409.1 mouse_genomes_project 9 26906181 27742570 - Ntm protein_coding retained_intron MGP_LPJ_T0091322.1 MGP_LPJ_G0034409.1 mouse_genomes_project 9 27143685 27742559 - Ntm protein_coding processed_transcript MGP_LPJ_T0091323.1 MGP_LPJ_G0034409.1 mouse_genomes_project 9 27721336 27742581 - Ntm protein_coding processed_transcript MGP_LPJ_T0009327.1 MGP_LPJ_G0007493.1 mouse_genomes_project 9 99743483 99744110 - 2610303G11Rik lincRNA lincRNA MGP_LPJ_T0091031.1 MGP_LPJ_G0034291.1 mouse_genomes_project 9 16644763 16645705 - MGP_LPJ_P0091031 Olfr846 protein_coding protein_coding MGP_LPJ_T0002491.1 MGP_LPJ_G0002397.1 mouse_genomes_project 9 112463180 112465920 + TEC TEC MGP_LPJ_T0015993.1 MGP_LPJ_G0014084.1 mouse_genomes_project 9 35870728 35871722 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098690.1 MGP_LPJ_G0036958.1 mouse_genomes_project 9 103908029 103910501 - Gm29388 sense_intronic sense_intronic MGP_LPJ_T0099818.1 MGP_LPJ_G0038081.1 mouse_genomes_project 9 43272588 43272703 - Gm22540 snRNA snRNA MGP_LPJ_T0009289.1 MGP_LPJ_G0007465.1 mouse_genomes_project 9 75968632 75974834 + 4933433G15Rik lincRNA lincRNA MGP_LPJ_T0009290.1 MGP_LPJ_G0007465.1 mouse_genomes_project 9 75968632 75977006 + 4933433G15Rik lincRNA lincRNA MGP_LPJ_T0101139.1 MGP_LPJ_G0039402.1 mouse_genomes_project 9 112547094 112547220 - Gm23377 snoRNA snoRNA MGP_LPJ_T0093506.1 MGP_LPJ_G0035053.1 mouse_genomes_project 9 100575603 100593407 + MGP_LPJ_P0093506 Faim protein_coding protein_coding MGP_LPJ_T0093507.1 MGP_LPJ_G0035053.1 mouse_genomes_project 9 100575615 100579878 + Faim protein_coding retained_intron MGP_LPJ_T0093508.1 MGP_LPJ_G0035053.1 mouse_genomes_project 9 100575621 100582453 + Faim protein_coding retained_intron MGP_LPJ_T0093509.1 MGP_LPJ_G0035053.1 mouse_genomes_project 9 100581045 100593391 + MGP_LPJ_P0093509 Faim protein_coding protein_coding MGP_LPJ_T0091370.1 MGP_LPJ_G0034425.1 mouse_genomes_project 9 32518238 32524367 + MGP_LPJ_P0091370 Kirrel3 protein_coding protein_coding MGP_LPJ_T0091371.1 MGP_LPJ_G0034425.1 mouse_genomes_project 9 32518469 32545790 + Kirrel3 protein_coding processed_transcript MGP_LPJ_T0091372.1 MGP_LPJ_G0034425.1 mouse_genomes_project 9 32518470 33099362 + MGP_LPJ_P0091372 Kirrel3 protein_coding protein_coding MGP_LPJ_T0091373.1 MGP_LPJ_G0034425.1 mouse_genomes_project 9 32523941 33100795 + MGP_LPJ_P0091373 Kirrel3 protein_coding protein_coding MGP_LPJ_T0091374.1 MGP_LPJ_G0034425.1 mouse_genomes_project 9 32524003 33100795 + MGP_LPJ_P0091374 Kirrel3 protein_coding protein_coding MGP_LPJ_T0091375.1 MGP_LPJ_G0034425.1 mouse_genomes_project 9 32524003 33094919 + MGP_LPJ_P0091375 Kirrel3 protein_coding protein_coding MGP_LPJ_T0091376.1 MGP_LPJ_G0034425.1 mouse_genomes_project 9 32524036 33100392 + MGP_LPJ_P0091376 Kirrel3 protein_coding protein_coding MGP_LPJ_T0091377.1 MGP_LPJ_G0034425.1 mouse_genomes_project 9 32524144 33100392 + MGP_LPJ_P0091377 Kirrel3 protein_coding protein_coding MGP_LPJ_T0091378.1 MGP_LPJ_G0034425.1 mouse_genomes_project 9 33080444 33094917 + MGP_LPJ_P0091378 Kirrel3 protein_coding protein_coding MGP_LPJ_T0091057.1 MGP_LPJ_G0034316.1 mouse_genomes_project 9 17736690 17765116 - MGP_LPJ_P0091057 Zfp26 protein_coding protein_coding MGP_LPJ_T0091058.1 MGP_LPJ_G0034316.1 mouse_genomes_project 9 17738748 17764913 - Zfp26 protein_coding retained_intron MGP_LPJ_T0091059.1 MGP_LPJ_G0034316.1 mouse_genomes_project 9 17740780 17764945 - Zfp26 protein_coding retained_intron MGP_LPJ_T0091060.1 MGP_LPJ_G0034316.1 mouse_genomes_project 9 17742017 17745091 - Zfp26 protein_coding processed_transcript MGP_LPJ_T0091061.1 MGP_LPJ_G0034316.1 mouse_genomes_project 9 17745744 17765118 - Zfp26 protein_coding retained_intron MGP_LPJ_T0091062.1 MGP_LPJ_G0034316.1 mouse_genomes_project 9 17748033 17764783 - MGP_LPJ_P0091062 Zfp26 protein_coding protein_coding MGP_LPJ_T0090939.1 MGP_LPJ_G0034251.1 mouse_genomes_project 9 11748770 11757407 - MGP_LPJ_P0090939 Piwil4 protein_coding protein_coding MGP_LPJ_T0090940.1 MGP_LPJ_G0034251.1 mouse_genomes_project 9 11754114 11793053 - MGP_LPJ_P0090940 Piwil4 protein_coding protein_coding MGP_LPJ_T0090941.1 MGP_LPJ_G0034251.1 mouse_genomes_project 9 11754115 11770808 - MGP_LPJ_P0090941 Piwil4 protein_coding protein_coding MGP_LPJ_T0090942.1 MGP_LPJ_G0034251.1 mouse_genomes_project 9 11754694 11793065 - MGP_LPJ_P0090942 Piwil4 protein_coding protein_coding MGP_LPJ_T0009346.1 MGP_LPJ_G0007510.1 mouse_genomes_project 9 109677077 109677544 + Gm38150 lincRNA lincRNA MGP_LPJ_T0091328.1 MGP_LPJ_G0034413.1 mouse_genomes_project 9 28882757 28923548 + MGP_LPJ_P0091328 Zbtb44 protein_coding protein_coding MGP_LPJ_T0091329.1 MGP_LPJ_G0034413.1 mouse_genomes_project 9 28906677 28923276 + MGP_LPJ_P0091329 Zbtb44 protein_coding protein_coding MGP_LPJ_T0011758.1 MGP_LPJ_G0009876.1 mouse_genomes_project 9 100275682 100275789 - Gm27919 misc_RNA misc_RNA MGP_LPJ_T0005480.1 MGP_LPJ_G0004637.1 mouse_genomes_project 9 57308557 57367811 + antisense antisense MGP_LPJ_T0005481.1 MGP_LPJ_G0004637.1 mouse_genomes_project 9 57359785 57368145 + antisense antisense MGP_LPJ_T0005482.1 MGP_LPJ_G0004637.1 mouse_genomes_project 9 57361195 57368050 + antisense antisense MGP_LPJ_T0091586.1 MGP_LPJ_G0034522.1 mouse_genomes_project 9 37434211 37435321 + MGP_LPJ_P0091586 Olfr27 protein_coding protein_coding MGP_LPJ_T0091013.1 MGP_LPJ_G0034276.1 mouse_genomes_project 9 15703194 15733459 - MGP_LPJ_P0091013 Zfp558 protein_coding nonsense_mediated_decay MGP_LPJ_T0091014.1 MGP_LPJ_G0034276.1 mouse_genomes_project 9 15703811 15728761 - MGP_LPJ_P0091014 Zfp558 protein_coding protein_coding MGP_LPJ_T0091015.1 MGP_LPJ_G0034276.1 mouse_genomes_project 9 15707276 15733464 - Zfp558 protein_coding processed_transcript MGP_LPJ_T0091016.1 MGP_LPJ_G0034276.1 mouse_genomes_project 9 15728091 15728624 - Zfp558 protein_coding processed_transcript MGP_LPJ_T0092680.1 MGP_LPJ_G0034878.1 mouse_genomes_project 9 67100533 67103878 + MGP_LPJ_P0092680 Rps27l protein_coding protein_coding MGP_LPJ_T0092681.1 MGP_LPJ_G0034878.1 mouse_genomes_project 9 67100538 67103880 + MGP_LPJ_P0092681 Rps27l protein_coding protein_coding MGP_LPJ_T0092682.1 MGP_LPJ_G0034878.1 mouse_genomes_project 9 67100613 67103834 + MGP_LPJ_P0092682 Rps27l protein_coding nonsense_mediated_decay MGP_LPJ_T0092683.1 MGP_LPJ_G0034878.1 mouse_genomes_project 9 67100802 67103882 + Rps27l protein_coding processed_transcript MGP_LPJ_T0092684.1 MGP_LPJ_G0034878.1 mouse_genomes_project 9 67102089 67103834 + MGP_LPJ_P0092684 Rps27l protein_coding protein_coding MGP_LPJ_T0092685.1 MGP_LPJ_G0034878.1 mouse_genomes_project 9 67102928 67103877 + Rps27l protein_coding retained_intron MGP_LPJ_T0091438.1 MGP_LPJ_G0034443.1 mouse_genomes_project 9 33840792 33842378 - MGP_LPJ_P0091438 Gm17727 protein_coding protein_coding MGP_LPJ_T0016105.1 MGP_LPJ_G0014196.1 mouse_genomes_project 9 105174150 105189632 - processed_pseudogene processed_pseudogene MGP_LPJ_T0092510.1 MGP_LPJ_G0034829.1 mouse_genomes_project 9 63871034 63945258 - MGP_LPJ_P0092510 Smad6 protein_coding protein_coding MGP_LPJ_T0092511.1 MGP_LPJ_G0034829.1 mouse_genomes_project 9 63871967 63940186 - Smad6 protein_coding processed_transcript MGP_LPJ_T0092512.1 MGP_LPJ_G0034829.1 mouse_genomes_project 9 63944959 63945231 - MGP_LPJ_P0092512 Smad6 protein_coding protein_coding MGP_LPJ_T0093545.1 MGP_LPJ_G0035062.1 mouse_genomes_project 9 101239039 101248796 + MGP_LPJ_P0093545 A4gnt protein_coding protein_coding MGP_LPJ_T0091102.1 MGP_LPJ_G0034324.1 mouse_genomes_project 9 18111360 18158706 - MGP_LPJ_P0091102 Col5a3 protein_coding protein_coding MGP_LPJ_T0091103.1 MGP_LPJ_G0034324.1 mouse_genomes_project 9 18124019 18158706 - Col5a3 protein_coding retained_intron MGP_LPJ_T0091675.1 MGP_LPJ_G0034572.1 mouse_genomes_project 9 40948087 40962442 - Tecta protein_coding processed_transcript MGP_LPJ_T0091676.1 MGP_LPJ_G0034572.1 mouse_genomes_project 9 40948090 41022817 - MGP_LPJ_P0091676 Tecta protein_coding protein_coding MGP_LPJ_T0091677.1 MGP_LPJ_G0034572.1 mouse_genomes_project 9 40948163 41022615 - MGP_LPJ_P0091677 Tecta protein_coding protein_coding MGP_LPJ_T0092267.1 MGP_LPJ_G0034763.1 mouse_genomes_project 9 57032196 57044066 + MGP_LPJ_P0092267 Cox5a protein_coding protein_coding MGP_LPJ_T0002377.1 MGP_LPJ_G0002284.1 mouse_genomes_project 9 30506875 30508737 - TEC TEC MGP_LPJ_T0009246.1 MGP_LPJ_G0007430.1 mouse_genomes_project 9 39033020 39035496 + Gm17540 lincRNA lincRNA MGP_LPJ_T0091235.1 MGP_LPJ_G0034380.1 mouse_genomes_project 9 19714132 19731165 + MGP_LPJ_P0091235 Zfp809 protein_coding protein_coding MGP_LPJ_T0092921.1 MGP_LPJ_G0034923.1 mouse_genomes_project 9 73547224 73557344 + MGP_LPJ_P0092921 Rsl24d1 protein_coding protein_coding MGP_LPJ_T0092922.1 MGP_LPJ_G0034923.1 mouse_genomes_project 9 73547246 73557965 + MGP_LPJ_P0092922 Rsl24d1 protein_coding protein_coding MGP_LPJ_T0092923.1 MGP_LPJ_G0034923.1 mouse_genomes_project 9 73547301 73557201 + MGP_LPJ_P0092923 Rsl24d1 protein_coding nonsense_mediated_decay MGP_LPJ_T0092924.1 MGP_LPJ_G0034923.1 mouse_genomes_project 9 73548394 73557014 + MGP_LPJ_P0092924 Rsl24d1 protein_coding protein_coding MGP_LPJ_T0018502.1 MGP_LPJ_G0015664.1 mouse_genomes_project 9 78215128 78216637 + Gm19569 processed_transcript lincRNA MGP_LPJ_T0018503.1 MGP_LPJ_G0015664.1 mouse_genomes_project 9 78215371 78216637 + Gm19569 processed_transcript retained_intron MGP_LPJ_T0002371.1 MGP_LPJ_G0002278.1 mouse_genomes_project 9 18643202 18645901 + TEC TEC MGP_LPJ_T0094423.1 MGP_LPJ_G0035204.1 mouse_genomes_project 9 111047368 111048313 + MGP_LPJ_P0094423 Tmem89 protein_coding protein_coding MGP_LPJ_T0094424.1 MGP_LPJ_G0035204.1 mouse_genomes_project 9 111047368 111048313 + MGP_LPJ_P0094424 Tmem89 protein_coding protein_coding MGP_LPJ_T0093898.1 MGP_LPJ_G0035129.1 mouse_genomes_project 9 108674112 108679157 - MGP_LPJ_P0093898 Grm2 protein_coding protein_coding MGP_LPJ_T0093899.1 MGP_LPJ_G0035129.1 mouse_genomes_project 9 108674134 108687060 - MGP_LPJ_P0093899 Grm2 protein_coding protein_coding MGP_LPJ_T0093900.1 MGP_LPJ_G0035129.1 mouse_genomes_project 9 108675908 108687062 - MGP_LPJ_P0093900 Grm2 protein_coding protein_coding MGP_LPJ_T0093901.1 MGP_LPJ_G0035129.1 mouse_genomes_project 9 108676007 108677643 - Grm2 protein_coding processed_transcript MGP_LPJ_T0099817.1 MGP_LPJ_G0038080.1 mouse_genomes_project 9 42644249 42644354 - Gm23326 snRNA snRNA MGP_LPJ_T0092112.1 MGP_LPJ_G0034710.1 mouse_genomes_project 9 53018567 53044263 - MGP_LPJ_P0092112 Rab39 protein_coding protein_coding MGP_LPJ_T0090999.1 MGP_LPJ_G0034271.1 mouse_genomes_project 9 15533851 15555612 + MGP_LPJ_P0090999 Chordc1 protein_coding protein_coding MGP_LPJ_T0090856.1 MGP_LPJ_G0034225.1 mouse_genomes_project 9 4536492 4584782 + MGP_LPJ_P0090856 Mmp20 protein_coding protein_coding MGP_LPJ_T0091924.1 MGP_LPJ_G0034648.1 mouse_genomes_project 9 45233315 45246887 + Bud13 protein_coding retained_intron MGP_LPJ_T0091925.1 MGP_LPJ_G0034648.1 mouse_genomes_project 9 45233315 45251568 + MGP_LPJ_P0091925 Bud13 protein_coding protein_coding MGP_LPJ_T0091926.1 MGP_LPJ_G0034648.1 mouse_genomes_project 9 45238403 45251568 + MGP_LPJ_P0091926 Bud13 protein_coding nonsense_mediated_decay MGP_LPJ_T0091927.1 MGP_LPJ_G0034648.1 mouse_genomes_project 9 45238425 45243334 + Bud13 protein_coding retained_intron MGP_LPJ_T0009331.1 MGP_LPJ_G0007497.1 mouse_genomes_project 9 101975822 101977736 - Gm28167 lincRNA lincRNA MGP_LPJ_T0095040.1 MGP_LPJ_G0035350.1 mouse_genomes_project 9 125673890 125706938 + MGP_LPJ_P0095040 Abhd5 protein_coding protein_coding MGP_LPJ_T0095041.1 MGP_LPJ_G0035350.1 mouse_genomes_project 9 125674012 125706938 + MGP_LPJ_P0095041 Abhd5 protein_coding protein_coding MGP_LPJ_T0095042.1 MGP_LPJ_G0035350.1 mouse_genomes_project 9 125674012 125705239 + MGP_LPJ_P0095042 Abhd5 protein_coding nonsense_mediated_decay MGP_LPJ_T0095043.1 MGP_LPJ_G0035350.1 mouse_genomes_project 9 125674014 125681562 + Abhd5 protein_coding processed_transcript MGP_LPJ_T0095044.1 MGP_LPJ_G0035350.1 mouse_genomes_project 9 125674014 125703346 + MGP_LPJ_P0095044 Abhd5 protein_coding nonsense_mediated_decay MGP_LPJ_T0095045.1 MGP_LPJ_G0035350.1 mouse_genomes_project 9 125689066 125693675 + MGP_LPJ_P0095045 Abhd5 protein_coding protein_coding MGP_LPJ_T0094902.1 MGP_LPJ_G0035305.1 mouse_genomes_project 9 122340899 122430736 - MGP_LPJ_P0094902 Oxsr1 protein_coding protein_coding MGP_LPJ_T0094903.1 MGP_LPJ_G0035305.1 mouse_genomes_project 9 122343137 122430631 - MGP_LPJ_P0094903 Oxsr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0094904.1 MGP_LPJ_G0035305.1 mouse_genomes_project 9 122343612 122345830 - Oxsr1 protein_coding retained_intron MGP_LPJ_T0094905.1 MGP_LPJ_G0035305.1 mouse_genomes_project 9 122345235 122367243 - MGP_LPJ_P0094905 Oxsr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0094240.1 MGP_LPJ_G0035179.1 mouse_genomes_project 9 110447849 110450882 - MGP_LPJ_P0094240 Tcta protein_coding protein_coding MGP_LPJ_T0094241.1 MGP_LPJ_G0035179.1 mouse_genomes_project 9 110448545 110451052 - MGP_LPJ_P0094241 Tcta protein_coding protein_coding MGP_LPJ_T0094242.1 MGP_LPJ_G0035179.1 mouse_genomes_project 9 110448781 110450840 - MGP_LPJ_P0094242 Tcta protein_coding protein_coding MGP_LPJ_T0091468.1 MGP_LPJ_G0034455.1 mouse_genomes_project 9 34935489 34955222 - MGP_LPJ_P0091468 Ei24 protein_coding protein_coding MGP_LPJ_T0091469.1 MGP_LPJ_G0034455.1 mouse_genomes_project 9 34935489 34955139 - MGP_LPJ_P0091469 Ei24 protein_coding protein_coding MGP_LPJ_T0091470.1 MGP_LPJ_G0034455.1 mouse_genomes_project 9 34936208 34939534 - Ei24 protein_coding retained_intron MGP_LPJ_T0091471.1 MGP_LPJ_G0034455.1 mouse_genomes_project 9 34936508 34939039 - Ei24 protein_coding retained_intron MGP_LPJ_T0091472.1 MGP_LPJ_G0034455.1 mouse_genomes_project 9 34939102 34942303 - Ei24 protein_coding retained_intron MGP_LPJ_T0091473.1 MGP_LPJ_G0034455.1 mouse_genomes_project 9 34941894 34954886 - MGP_LPJ_P0091473 Ei24 protein_coding protein_coding MGP_LPJ_T0091474.1 MGP_LPJ_G0034455.1 mouse_genomes_project 9 34941903 34948175 - MGP_LPJ_P0091474 Ei24 protein_coding protein_coding MGP_LPJ_T0091475.1 MGP_LPJ_G0034455.1 mouse_genomes_project 9 34942812 34955227 - MGP_LPJ_P0091475 Ei24 protein_coding nonsense_mediated_decay MGP_LPJ_T0091272.1 MGP_LPJ_G0034396.1 mouse_genomes_project 9 23085449 23209770 + MGP_LPJ_P0091272 Eepd1 protein_coding protein_coding MGP_LPJ_T0091273.1 MGP_LPJ_G0034396.1 mouse_genomes_project 9 23086770 23091218 + Eepd1 protein_coding processed_transcript MGP_LPJ_T0092547.1 MGP_LPJ_G0034838.1 mouse_genomes_project 9 64344169 64666057 + MGP_LPJ_P0092547 Megf11 protein_coding protein_coding MGP_LPJ_T0092548.1 MGP_LPJ_G0034838.1 mouse_genomes_project 9 64344169 64674287 + MGP_LPJ_P0092548 Megf11 protein_coding protein_coding MGP_LPJ_T0092549.1 MGP_LPJ_G0034838.1 mouse_genomes_project 9 64344169 64672372 + MGP_LPJ_P0092549 Megf11 protein_coding protein_coding MGP_LPJ_T0092550.1 MGP_LPJ_G0034838.1 mouse_genomes_project 9 64344226 64611625 + Megf11 protein_coding retained_intron MGP_LPJ_T0092551.1 MGP_LPJ_G0034838.1 mouse_genomes_project 9 64452161 64672890 + MGP_LPJ_P0092551 Megf11 protein_coding unknown_likely_coding MGP_LPJ_T0092552.1 MGP_LPJ_G0034838.1 mouse_genomes_project 9 64458415 64466151 + Megf11 protein_coding processed_transcript MGP_LPJ_T0092553.1 MGP_LPJ_G0034838.1 mouse_genomes_project 9 64458680 64652836 + Megf11 protein_coding retained_intron MGP_LPJ_T0092554.1 MGP_LPJ_G0034838.1 mouse_genomes_project 9 64505391 64600223 + Megf11 protein_coding processed_transcript MGP_LPJ_T0092555.1 MGP_LPJ_G0034838.1 mouse_genomes_project 9 64625793 64657488 + MGP_LPJ_P0092555 Megf11 protein_coding protein_coding MGP_LPJ_T0092556.1 MGP_LPJ_G0034838.1 mouse_genomes_project 9 64658863 64671015 + Megf11 protein_coding processed_transcript MGP_LPJ_T0091022.1 MGP_LPJ_G0034282.1 mouse_genomes_project 9 16161528 16162476 + MGP_LPJ_P0091022 Olfr830 protein_coding protein_coding MGP_LPJ_T0009312.1 MGP_LPJ_G0007483.1 mouse_genomes_project 9 92634770 92812314 + Gm29478 lincRNA lincRNA MGP_LPJ_T0095016.1 MGP_LPJ_G0035339.1 mouse_genomes_project 9 125075994 125082318 + MGP_LPJ_P0095016 Klhl40 protein_coding protein_coding MGP_LPJ_T0002379.1 MGP_LPJ_G0002286.1 mouse_genomes_project 9 32459128 32481541 - TEC TEC MGP_LPJ_T0005575.1 MGP_LPJ_G0004704.1 mouse_genomes_project 9 113130202 113135587 - Gm42762 antisense antisense MGP_LPJ_T0002431.1 MGP_LPJ_G0002337.1 mouse_genomes_project 9 90372383 90374416 + TEC TEC MGP_LPJ_T0094984.1 MGP_LPJ_G0035331.1 mouse_genomes_project 9 124633761 124729062 + MGP_LPJ_P0094984 Trak1 protein_coding unknown_likely_coding MGP_LPJ_T0094985.1 MGP_LPJ_G0035331.1 mouse_genomes_project 9 124637820 124748207 + MGP_LPJ_P0094985 Trak1 protein_coding protein_coding MGP_LPJ_T0016088.1 MGP_LPJ_G0014179.1 mouse_genomes_project 9 98730835 98732672 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018531.1 MGP_LPJ_G0015676.1 mouse_genomes_project 9 105254862 105295291 + 5830418P13Rik processed_transcript antisense MGP_LPJ_T0018532.1 MGP_LPJ_G0015676.1 mouse_genomes_project 9 105257421 105258562 + 5830418P13Rik processed_transcript retained_intron MGP_LPJ_T0018533.1 MGP_LPJ_G0015676.1 mouse_genomes_project 9 105257445 105260074 + 5830418P13Rik processed_transcript antisense MGP_LPJ_T0091777.1 MGP_LPJ_G0034609.1 mouse_genomes_project 9 43412808 43446916 + MGP_LPJ_P0091777 Ddx6 protein_coding unknown_likely_coding MGP_LPJ_T0091987.1 MGP_LPJ_G0034676.1 mouse_genomes_project 9 49855814 49863340 - MGP_LPJ_P0091987 Sdhd protein_coding protein_coding MGP_LPJ_T0016010.1 MGP_LPJ_G0014101.1 mouse_genomes_project 9 65870899 65871416 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009267.1 MGP_LPJ_G0007448.1 mouse_genomes_project 9 60413988 60416670 + B930082K07Rik lincRNA lincRNA MGP_LPJ_T0092891.1 MGP_LPJ_G0034917.1 mouse_genomes_project 9 73405823 73411207 - MGP_LPJ_P0092891 Ccpg1os protein_coding protein_coding MGP_LPJ_T0092892.1 MGP_LPJ_G0034917.1 mouse_genomes_project 9 73409448 73411213 - Ccpg1os protein_coding retained_intron MGP_LPJ_T0091556.1 MGP_LPJ_G0034498.1 mouse_genomes_project 9 36715338 36716275 + MGP_LPJ_P0091556 Olfr905 protein_coding protein_coding MGP_LPJ_T0002495.1 MGP_LPJ_G0002401.1 mouse_genomes_project 9 113373764 113376567 - TEC TEC MGP_LPJ_T0093730.1 MGP_LPJ_G0035098.1 mouse_genomes_project 9 106433561 106790044 + MGP_LPJ_P0093730 Cpne4 protein_coding protein_coding MGP_LPJ_T0093731.1 MGP_LPJ_G0035098.1 mouse_genomes_project 9 106452286 106789796 + MGP_LPJ_P0093731 Cpne4 protein_coding protein_coding MGP_LPJ_T0093732.1 MGP_LPJ_G0035098.1 mouse_genomes_project 9 106455073 106968068 + MGP_LPJ_P0093732 Cpne4 protein_coding protein_coding MGP_LPJ_T0093733.1 MGP_LPJ_G0035098.1 mouse_genomes_project 9 106455377 106968068 + MGP_LPJ_P0093733 Cpne4 protein_coding protein_coding MGP_LPJ_T0016012.1 MGP_LPJ_G0014103.1 mouse_genomes_project 9 72175549 72175811 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091982.1 MGP_LPJ_G0034672.1 mouse_genomes_project 9 49772745 49780098 - MGP_LPJ_P0091982 Pts protein_coding protein_coding MGP_LPJ_T0002463.1 MGP_LPJ_G0002369.1 mouse_genomes_project 9 103732837 103733885 + TEC TEC MGP_LPJ_T0016090.1 MGP_LPJ_G0014181.1 mouse_genomes_project 9 98760586 98760872 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091946.1 MGP_LPJ_G0034653.1 mouse_genomes_project 9 47489629 47529512 + MGP_LPJ_P0091946 Nxpe4 protein_coding unknown_likely_coding MGP_LPJ_T0092916.1 MGP_LPJ_G0034921.1 mouse_genomes_project 9 73535643 73536695 + MGP_LPJ_P0092916 Khdc3 protein_coding protein_coding MGP_LPJ_T0092917.1 MGP_LPJ_G0034921.1 mouse_genomes_project 9 73536205 73538246 + MGP_LPJ_P0092917 Khdc3 protein_coding protein_coding MGP_LPJ_T0092918.1 MGP_LPJ_G0034921.1 mouse_genomes_project 9 73536205 73538246 + MGP_LPJ_P0092918 Khdc3 protein_coding protein_coding MGP_LPJ_T0092920.1 MGP_LPJ_G0034921.1 mouse_genomes_project 9 73536317 73538000 + MGP_LPJ_P0092920 Khdc3 protein_coding protein_coding MGP_LPJ_T0091824.1 MGP_LPJ_G0034617.1 mouse_genomes_project 9 43742668 43749983 - MGP_LPJ_P0091824 Atp5l protein_coding protein_coding MGP_LPJ_T0094929.1 MGP_LPJ_G0035312.1 mouse_genomes_project 9 122738085 122855257 - MGP_LPJ_P0094929 Scn10a protein_coding protein_coding MGP_LPJ_T0092586.1 MGP_LPJ_G0034853.1 mouse_genomes_project 9 65408983 65425256 + MGP_LPJ_P0092586 Rasl12 protein_coding protein_coding MGP_LPJ_T0092587.1 MGP_LPJ_G0034853.1 mouse_genomes_project 9 65408983 65423111 + MGP_LPJ_P0092587 Rasl12 protein_coding protein_coding MGP_LPJ_T0002390.1 MGP_LPJ_G0002297.1 mouse_genomes_project 9 72290013 72292007 - TEC TEC MGP_LPJ_T0009261.1 MGP_LPJ_G0007442.1 mouse_genomes_project 9 56535678 56536476 - 2700012I20Rik lincRNA lincRNA MGP_LPJ_T0099851.1 MGP_LPJ_G0038114.1 mouse_genomes_project 9 87756370 87756484 - Gm25949 snRNA snRNA MGP_LPJ_T0011766.1 MGP_LPJ_G0009884.1 mouse_genomes_project 9 124493863 124494109 + Gm22987 misc_RNA misc_RNA MGP_LPJ_T0090927.1 MGP_LPJ_G0034245.1 mouse_genomes_project 9 10813151 10831977 + MGP_LPJ_P0090927 Fam76b protein_coding nonsense_mediated_decay MGP_LPJ_T0090928.1 MGP_LPJ_G0034245.1 mouse_genomes_project 9 10813151 10831977 + MGP_LPJ_P0090928 Fam76b protein_coding protein_coding MGP_LPJ_T0090929.1 MGP_LPJ_G0034245.1 mouse_genomes_project 9 10813170 10816693 + Fam76b protein_coding retained_intron MGP_LPJ_T0090930.1 MGP_LPJ_G0034245.1 mouse_genomes_project 9 10822138 10825502 + Fam76b protein_coding retained_intron MGP_LPJ_T0092204.1 MGP_LPJ_G0034743.1 mouse_genomes_project 9 55518589 55557336 + MGP_LPJ_P0092204 Pstpip1 protein_coding protein_coding MGP_LPJ_T0092205.1 MGP_LPJ_G0034743.1 mouse_genomes_project 9 55518603 55557324 + Pstpip1 protein_coding retained_intron MGP_LPJ_T0092206.1 MGP_LPJ_G0034743.1 mouse_genomes_project 9 55518603 55557320 + Pstpip1 protein_coding retained_intron MGP_LPJ_T0092207.1 MGP_LPJ_G0034743.1 mouse_genomes_project 9 55548878 55554540 + Pstpip1 protein_coding processed_transcript MGP_LPJ_T0092208.1 MGP_LPJ_G0034743.1 mouse_genomes_project 9 55550681 55552349 + Pstpip1 protein_coding retained_intron MGP_LPJ_T0092209.1 MGP_LPJ_G0034743.1 mouse_genomes_project 9 55551646 55554599 + Pstpip1 protein_coding retained_intron MGP_LPJ_T0092210.1 MGP_LPJ_G0034743.1 mouse_genomes_project 9 55551646 55552639 + Pstpip1 protein_coding retained_intron MGP_LPJ_T0009292.1 MGP_LPJ_G0007467.1 mouse_genomes_project 9 78031727 78066829 - 5730403I07Rik lincRNA lincRNA MGP_LPJ_T0002462.1 MGP_LPJ_G0002368.1 mouse_genomes_project 9 103649797 103652047 - TEC TEC MGP_LPJ_T0093437.1 MGP_LPJ_G0035037.1 mouse_genomes_project 9 97936973 97945228 - MGP_LPJ_P0093437 protein_coding protein_coding MGP_LPJ_T0093438.1 MGP_LPJ_G0035037.1 mouse_genomes_project 9 97939105 97945206 - protein_coding processed_transcript MGP_LPJ_T0093235.1 MGP_LPJ_G0034995.1 mouse_genomes_project 9 88107439 88168889 + MGP_LPJ_P0093235 Cyb5r4 protein_coding protein_coding MGP_LPJ_T0093236.1 MGP_LPJ_G0034995.1 mouse_genomes_project 9 88107512 88161043 + Cyb5r4 protein_coding processed_transcript MGP_LPJ_T0093237.1 MGP_LPJ_G0034995.1 mouse_genomes_project 9 88116195 88139065 + Cyb5r4 protein_coding retained_intron MGP_LPJ_T0093238.1 MGP_LPJ_G0034995.1 mouse_genomes_project 9 88152251 88168495 + MGP_LPJ_P0093238 Cyb5r4 protein_coding nonsense_mediated_decay MGP_LPJ_T0016107.1 MGP_LPJ_G0014198.1 mouse_genomes_project 9 105238152 105238529 + processed_pseudogene processed_pseudogene MGP_LPJ_T0092569.1 MGP_LPJ_G0034843.1 mouse_genomes_project 9 64963607 64999709 - MGP_LPJ_P0092569 Hacd3 protein_coding protein_coding MGP_LPJ_T0091848.1 MGP_LPJ_G0034628.1 mouse_genomes_project 9 44017364 44051091 - MGP_LPJ_P0091848 Tmprss4 protein_coding protein_coding MGP_LPJ_T0091849.1 MGP_LPJ_G0034628.1 mouse_genomes_project 9 44017365 44051089 - MGP_LPJ_P0091849 Tmprss4 protein_coding nonsense_mediated_decay MGP_LPJ_T0091850.1 MGP_LPJ_G0034628.1 mouse_genomes_project 9 44017943 44051059 - Tmprss4 protein_coding processed_transcript MGP_LPJ_T0091851.1 MGP_LPJ_G0034628.1 mouse_genomes_project 9 44017943 44050975 - MGP_LPJ_P0091851 Tmprss4 protein_coding nonsense_mediated_decay MGP_LPJ_T0091852.1 MGP_LPJ_G0034628.1 mouse_genomes_project 9 44019434 44025326 - Tmprss4 protein_coding retained_intron MGP_LPJ_T0095019.1 MGP_LPJ_G0035341.1 mouse_genomes_project 9 125096128 125140924 - MGP_LPJ_P0095019 Ccdc13 protein_coding protein_coding MGP_LPJ_T0095020.1 MGP_LPJ_G0035341.1 mouse_genomes_project 9 125096134 125111907 - MGP_LPJ_P0095020 Ccdc13 protein_coding nonsense_mediated_decay MGP_LPJ_T0095021.1 MGP_LPJ_G0035341.1 mouse_genomes_project 9 125096669 125112053 - Ccdc13 protein_coding retained_intron MGP_LPJ_T0095022.1 MGP_LPJ_G0035341.1 mouse_genomes_project 9 125098521 125111889 - MGP_LPJ_P0095022 Ccdc13 protein_coding protein_coding MGP_LPJ_T0095023.1 MGP_LPJ_G0035341.1 mouse_genomes_project 9 125099032 125111992 - Ccdc13 protein_coding retained_intron MGP_LPJ_T0095024.1 MGP_LPJ_G0035341.1 mouse_genomes_project 9 125119102 125132822 - Ccdc13 protein_coding retained_intron MGP_LPJ_T0009316.1 MGP_LPJ_G0007486.1 mouse_genomes_project 9 94172659 94192371 + Gm28054 lincRNA lincRNA MGP_LPJ_T0091694.1 MGP_LPJ_G0034580.1 mouse_genomes_project 9 41993475 42018794 + MGP_LPJ_P0091694 Trim29 protein_coding protein_coding MGP_LPJ_T0016042.1 MGP_LPJ_G0014133.1 mouse_genomes_project 9 81745200 81747203 - processed_pseudogene processed_pseudogene MGP_LPJ_T0094512.1 MGP_LPJ_G0035225.1 mouse_genomes_project 9 112218899 112226137 + MGP_LPJ_P0094512 Spink8 protein_coding protein_coding MGP_LPJ_T0094513.1 MGP_LPJ_G0035225.1 mouse_genomes_project 9 112221855 112232185 + MGP_LPJ_P0094513 Spink8 protein_coding protein_coding MGP_LPJ_T0094514.1 MGP_LPJ_G0035225.1 mouse_genomes_project 9 112221938 112232180 + MGP_LPJ_P0094514 Spink8 protein_coding protein_coding MGP_LPJ_T0011090.1 MGP_LPJ_G0009208.1 mouse_genomes_project 9 62047196 62047301 - Gm25603 miRNA miRNA MGP_LPJ_T0092262.1 MGP_LPJ_G0034758.1 mouse_genomes_project 9 56716573 56730652 + MGP_LPJ_P0092262 Trcg1 protein_coding protein_coding MGP_LPJ_T0091803.1 MGP_LPJ_G0034613.1 mouse_genomes_project 9 43600922 43622198 + MGP_LPJ_P0091803 Ift46 protein_coding protein_coding MGP_LPJ_T0091804.1 MGP_LPJ_G0034613.1 mouse_genomes_project 9 43600947 43611579 + MGP_LPJ_P0091804 Ift46 protein_coding protein_coding MGP_LPJ_T0091805.1 MGP_LPJ_G0034613.1 mouse_genomes_project 9 43601038 43615768 + Ift46 protein_coding processed_transcript MGP_LPJ_T0091806.1 MGP_LPJ_G0034613.1 mouse_genomes_project 9 43601041 43602406 + Ift46 protein_coding processed_transcript MGP_LPJ_T0091807.1 MGP_LPJ_G0034613.1 mouse_genomes_project 9 43601087 43613492 + MGP_LPJ_P0091807 Ift46 protein_coding protein_coding MGP_LPJ_T0091808.1 MGP_LPJ_G0034613.1 mouse_genomes_project 9 43601250 43611571 + MGP_LPJ_P0091808 Ift46 protein_coding protein_coding MGP_LPJ_T0091809.1 MGP_LPJ_G0034613.1 mouse_genomes_project 9 43601687 43611640 + MGP_LPJ_P0091809 Ift46 protein_coding protein_coding MGP_LPJ_T0091810.1 MGP_LPJ_G0034613.1 mouse_genomes_project 9 43605972 43620380 + MGP_LPJ_P0091810 Ift46 protein_coding protein_coding MGP_LPJ_T0091811.1 MGP_LPJ_G0034613.1 mouse_genomes_project 9 43607352 43611649 + Ift46 protein_coding retained_intron MGP_LPJ_T0091812.1 MGP_LPJ_G0034613.1 mouse_genomes_project 9 43613745 43617048 + Ift46 protein_coding processed_transcript MGP_LPJ_T0091813.1 MGP_LPJ_G0034613.1 mouse_genomes_project 9 43618929 43620221 + Ift46 protein_coding retained_intron MGP_LPJ_T0016061.1 MGP_LPJ_G0014152.1 mouse_genomes_project 9 89352321 89353143 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091902.1 MGP_LPJ_G0034641.1 mouse_genomes_project 9 44889135 44910551 - MGP_LPJ_P0091902 Pafah1b2 protein_coding protein_coding MGP_LPJ_T0092072.1 MGP_LPJ_G0034696.1 mouse_genomes_project 9 50908853 50912276 + MGP_LPJ_P0092072 protein_coding protein_coding MGP_LPJ_T0093812.1 MGP_LPJ_G0035112.1 mouse_genomes_project 9 108211962 108226993 + MGP_LPJ_P0093812 Twf2 protein_coding protein_coding MGP_LPJ_T0093813.1 MGP_LPJ_G0035112.1 mouse_genomes_project 9 108211991 108223854 + MGP_LPJ_P0093813 Twf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0093814.1 MGP_LPJ_G0035112.1 mouse_genomes_project 9 108211999 108224426 + MGP_LPJ_P0093814 Twf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0093815.1 MGP_LPJ_G0035112.1 mouse_genomes_project 9 108218302 108226991 + MGP_LPJ_P0093815 Twf2 protein_coding protein_coding MGP_LPJ_T0093816.1 MGP_LPJ_G0035112.1 mouse_genomes_project 9 108225831 108226625 + Twf2 protein_coding retained_intron MGP_LPJ_T0015999.1 MGP_LPJ_G0014090.1 mouse_genomes_project 9 48229905 48230598 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099864.1 MGP_LPJ_G0038127.1 mouse_genomes_project 9 109149052 109149159 + Gm22454 snRNA snRNA MGP_LPJ_T0016108.1 MGP_LPJ_G0014199.1 mouse_genomes_project 9 105734454 105734848 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011751.1 MGP_LPJ_G0009869.1 mouse_genomes_project 9 53898448 53898666 + Gm25980 misc_RNA misc_RNA MGP_LPJ_T0009282.1 MGP_LPJ_G0007458.1 mouse_genomes_project 9 72771792 72772403 + Gm27255 lincRNA lincRNA MGP_LPJ_T0002475.1 MGP_LPJ_G0002381.1 mouse_genomes_project 9 106168694 106171676 - TEC TEC MGP_LPJ_T0091078.1 MGP_LPJ_G0034320.1 mouse_genomes_project 9 17947002 17972572 - MGP_LPJ_P0091078 Fbxl12 protein_coding protein_coding MGP_LPJ_T0091079.1 MGP_LPJ_G0034320.1 mouse_genomes_project 9 17947114 17975006 - Fbxl12 protein_coding processed_transcript MGP_LPJ_T0091080.1 MGP_LPJ_G0034320.1 mouse_genomes_project 9 17965986 17975014 - MGP_LPJ_P0091080 Fbxl12 protein_coding protein_coding MGP_LPJ_T0091081.1 MGP_LPJ_G0034320.1 mouse_genomes_project 9 17966023 17967578 - MGP_LPJ_P0091081 Fbxl12 protein_coding protein_coding MGP_LPJ_T0091082.1 MGP_LPJ_G0034320.1 mouse_genomes_project 9 17966023 17975006 - MGP_LPJ_P0091082 Fbxl12 protein_coding protein_coding MGP_LPJ_T0091083.1 MGP_LPJ_G0034320.1 mouse_genomes_project 9 17966024 17975014 - MGP_LPJ_P0091083 Fbxl12 protein_coding protein_coding MGP_LPJ_T0091084.1 MGP_LPJ_G0034320.1 mouse_genomes_project 9 17966026 17975026 - MGP_LPJ_P0091084 Fbxl12 protein_coding protein_coding MGP_LPJ_T0091085.1 MGP_LPJ_G0034320.1 mouse_genomes_project 9 17966026 17973065 - MGP_LPJ_P0091085 Fbxl12 protein_coding protein_coding MGP_LPJ_T0091086.1 MGP_LPJ_G0034320.1 mouse_genomes_project 9 17967038 17975017 - MGP_LPJ_P0091086 Fbxl12 protein_coding protein_coding MGP_LPJ_T0091087.1 MGP_LPJ_G0034320.1 mouse_genomes_project 9 17971821 17975001 - Fbxl12 protein_coding retained_intron MGP_LPJ_T0091698.1 MGP_LPJ_G0034584.1 mouse_genomes_project 9 42823156 42852778 + MGP_LPJ_P0091698 Usp2 protein_coding protein_coding MGP_LPJ_T0091699.1 MGP_LPJ_G0034584.1 mouse_genomes_project 9 42823213 42851052 + MGP_LPJ_P0091699 Usp2 protein_coding protein_coding MGP_LPJ_T0091700.1 MGP_LPJ_G0034584.1 mouse_genomes_project 9 42825578 42851140 + MGP_LPJ_P0091700 Usp2 protein_coding protein_coding MGP_LPJ_T0091701.1 MGP_LPJ_G0034584.1 mouse_genomes_project 9 42828325 42832052 + MGP_LPJ_P0091701 Usp2 protein_coding protein_coding MGP_LPJ_T0091702.1 MGP_LPJ_G0034584.1 mouse_genomes_project 9 42842071 42851049 + MGP_LPJ_P0091702 Usp2 protein_coding protein_coding MGP_LPJ_T0091703.1 MGP_LPJ_G0034584.1 mouse_genomes_project 9 42842072 42851625 + MGP_LPJ_P0091703 Usp2 protein_coding protein_coding MGP_LPJ_T0091704.1 MGP_LPJ_G0034584.1 mouse_genomes_project 9 42844313 42849623 + MGP_LPJ_P0091704 Usp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0091705.1 MGP_LPJ_G0034584.1 mouse_genomes_project 9 42849590 42851511 + Usp2 protein_coding processed_transcript MGP_LPJ_T0091706.1 MGP_LPJ_G0034584.1 mouse_genomes_project 9 42849796 42851056 + Usp2 protein_coding processed_transcript MGP_LPJ_T0092869.1 MGP_LPJ_G0034911.1 mouse_genomes_project 9 72901513 72976871 + Rfx7 protein_coding processed_transcript MGP_LPJ_T0092870.1 MGP_LPJ_G0034911.1 mouse_genomes_project 9 72901819 72997430 + MGP_LPJ_P0092870 Rfx7 protein_coding protein_coding MGP_LPJ_T0092871.1 MGP_LPJ_G0034911.1 mouse_genomes_project 9 72901879 72989667 + MGP_LPJ_P0092871 Rfx7 protein_coding protein_coding MGP_LPJ_T0092872.1 MGP_LPJ_G0034911.1 mouse_genomes_project 9 72902011 72989730 + MGP_LPJ_P0092872 Rfx7 protein_coding protein_coding MGP_LPJ_T0092873.1 MGP_LPJ_G0034911.1 mouse_genomes_project 9 72971483 72974241 + Rfx7 protein_coding retained_intron MGP_LPJ_T0092874.1 MGP_LPJ_G0034911.1 mouse_genomes_project 9 72985812 72989718 + Rfx7 protein_coding retained_intron MGP_LPJ_T0090858.1 MGP_LPJ_G0034227.1 mouse_genomes_project 9 4684000 4714932 + MGP_LPJ_P0090858 Tmem123 protein_coding protein_coding MGP_LPJ_T0090859.1 MGP_LPJ_G0034227.1 mouse_genomes_project 9 4684108 4711647 + MGP_LPJ_P0090859 Tmem123 protein_coding nonsense_mediated_decay MGP_LPJ_T0090860.1 MGP_LPJ_G0034227.1 mouse_genomes_project 9 4684124 4714927 + MGP_LPJ_P0090860 Tmem123 protein_coding nonsense_mediated_decay MGP_LPJ_T0091918.1 MGP_LPJ_G0034647.1 mouse_genomes_project 9 45223457 45231797 + MGP_LPJ_P0091918 Zpr1 protein_coding protein_coding MGP_LPJ_T0091919.1 MGP_LPJ_G0034647.1 mouse_genomes_project 9 45223457 45231914 + MGP_LPJ_P0091919 Zpr1 protein_coding protein_coding MGP_LPJ_T0091920.1 MGP_LPJ_G0034647.1 mouse_genomes_project 9 45223549 45226050 + MGP_LPJ_P0091920 Zpr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0091921.1 MGP_LPJ_G0034647.1 mouse_genomes_project 9 45223892 45226998 + Zpr1 protein_coding retained_intron MGP_LPJ_T0091922.1 MGP_LPJ_G0034647.1 mouse_genomes_project 9 45225717 45226870 + Zpr1 protein_coding retained_intron MGP_LPJ_T0091923.1 MGP_LPJ_G0034647.1 mouse_genomes_project 9 45226394 45227917 + Zpr1 protein_coding retained_intron MGP_LPJ_T0094515.1 MGP_LPJ_G0035226.1 mouse_genomes_project 9 112240824 112250246 + MGP_LPJ_P0094515 Nme6 protein_coding protein_coding MGP_LPJ_T0094516.1 MGP_LPJ_G0035226.1 mouse_genomes_project 9 112240833 112250691 + MGP_LPJ_P0094516 Nme6 protein_coding protein_coding MGP_LPJ_T0094517.1 MGP_LPJ_G0035226.1 mouse_genomes_project 9 112240846 112241665 + Nme6 protein_coding retained_intron MGP_LPJ_T0094518.1 MGP_LPJ_G0035226.1 mouse_genomes_project 9 112240846 112250592 + Nme6 protein_coding processed_transcript MGP_LPJ_T0094519.1 MGP_LPJ_G0035226.1 mouse_genomes_project 9 112240856 112249756 + MGP_LPJ_P0094519 Nme6 protein_coding protein_coding MGP_LPJ_T0094520.1 MGP_LPJ_G0035226.1 mouse_genomes_project 9 112240861 112250376 + Nme6 protein_coding processed_transcript MGP_LPJ_T0094521.1 MGP_LPJ_G0035226.1 mouse_genomes_project 9 112240862 112250673 + Nme6 protein_coding processed_transcript MGP_LPJ_T0094522.1 MGP_LPJ_G0035226.1 mouse_genomes_project 9 112240882 112243701 + Nme6 protein_coding retained_intron MGP_LPJ_T0094523.1 MGP_LPJ_G0035226.1 mouse_genomes_project 9 112240961 112250303 + MGP_LPJ_P0094523 Nme6 protein_coding nonsense_mediated_decay MGP_LPJ_T0094524.1 MGP_LPJ_G0035226.1 mouse_genomes_project 9 112241105 112250441 + MGP_LPJ_P0094524 Nme6 protein_coding protein_coding MGP_LPJ_T0094525.1 MGP_LPJ_G0035226.1 mouse_genomes_project 9 112241117 112250378 + MGP_LPJ_P0094525 Nme6 protein_coding protein_coding MGP_LPJ_T0094526.1 MGP_LPJ_G0035226.1 mouse_genomes_project 9 112241122 112250297 + Nme6 protein_coding processed_transcript MGP_LPJ_T0094527.1 MGP_LPJ_G0035226.1 mouse_genomes_project 9 112241266 112249343 + Nme6 protein_coding retained_intron MGP_LPJ_T0094528.1 MGP_LPJ_G0035226.1 mouse_genomes_project 9 112241268 112250264 + Nme6 protein_coding processed_transcript MGP_LPJ_T0094529.1 MGP_LPJ_G0035226.1 mouse_genomes_project 9 112241366 112250833 + Nme6 protein_coding processed_transcript MGP_LPJ_T0093073.1 MGP_LPJ_G0034966.1 mouse_genomes_project 9 79353416 79471248 + MGP_LPJ_P0093073 Cd109 protein_coding protein_coding MGP_LPJ_T0093074.1 MGP_LPJ_G0034966.1 mouse_genomes_project 9 79353633 79355959 + Cd109 protein_coding processed_transcript MGP_LPJ_T0091445.1 MGP_LPJ_G0034449.1 mouse_genomes_project 9 34688621 34690197 + MGP_LPJ_P0091445 Gm9513 protein_coding protein_coding MGP_LPJ_T0091664.1 MGP_LPJ_G0034569.1 mouse_genomes_project 9 39534076 39685075 - MGP_LPJ_P0091664 Ubash3b protein_coding protein_coding MGP_LPJ_T0091665.1 MGP_LPJ_G0034569.1 mouse_genomes_project 9 39577135 39690438 - Ubash3b protein_coding processed_transcript MGP_LPJ_T0091666.1 MGP_LPJ_G0034569.1 mouse_genomes_project 9 39577163 39685151 - MGP_LPJ_P0091666 Ubash3b protein_coding protein_coding MGP_LPJ_T0091667.1 MGP_LPJ_G0034569.1 mouse_genomes_project 9 39577221 39690606 - MGP_LPJ_P0091667 Ubash3b protein_coding protein_coding MGP_LPJ_T0091668.1 MGP_LPJ_G0034569.1 mouse_genomes_project 9 39687515 39690615 - Ubash3b protein_coding processed_transcript MGP_LPJ_T0094886.1 MGP_LPJ_G0035300.1 mouse_genomes_project 9 122167173 122191549 + Dlec1 protein_coding retained_intron MGP_LPJ_T0094887.1 MGP_LPJ_G0035300.1 mouse_genomes_project 9 122167173 122214508 + MGP_LPJ_P0094887 Dlec1 protein_coding protein_coding MGP_LPJ_T0094888.1 MGP_LPJ_G0035300.1 mouse_genomes_project 9 122167173 122213973 + MGP_LPJ_P0094888 Dlec1 protein_coding protein_coding MGP_LPJ_T0094889.1 MGP_LPJ_G0035300.1 mouse_genomes_project 9 122167204 122200946 + MGP_LPJ_P0094889 Dlec1 protein_coding nonsense_mediated_decay MGP_LPJ_T0094890.1 MGP_LPJ_G0035300.1 mouse_genomes_project 9 122184350 122210534 + Dlec1 protein_coding retained_intron MGP_LPJ_T0094891.1 MGP_LPJ_G0035300.1 mouse_genomes_project 9 122193268 122194487 + Dlec1 protein_coding retained_intron MGP_LPJ_T0094892.1 MGP_LPJ_G0035300.1 mouse_genomes_project 9 122194623 122200944 + Dlec1 protein_coding retained_intron MGP_LPJ_T0094893.1 MGP_LPJ_G0035300.1 mouse_genomes_project 9 122194774 122196494 + Dlec1 protein_coding retained_intron MGP_LPJ_T0002402.1 MGP_LPJ_G0002309.1 mouse_genomes_project 9 73088304 73091806 + TEC TEC MGP_LPJ_T0101113.1 MGP_LPJ_G0039376.1 mouse_genomes_project 9 70435308 70435439 - Gm24257 snoRNA snoRNA MGP_LPJ_T0016081.1 MGP_LPJ_G0014172.1 mouse_genomes_project 9 97018508 97018950 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098336.1 MGP_LPJ_G0036617.1 mouse_genomes_project 9 97963701 97963783 - Gm27289 rRNA rRNA MGP_LPJ_T0092677.1 MGP_LPJ_G0034875.1 mouse_genomes_project 9 66920656 66940937 - MGP_LPJ_P0092677 protein_coding protein_coding MGP_LPJ_T0091444.1 MGP_LPJ_G0034448.1 mouse_genomes_project 9 34641150 34644439 + MGP_LPJ_P0091444 Gm7257 protein_coding protein_coding MGP_LPJ_T0094976.1 MGP_LPJ_G0035330.1 mouse_genomes_project 9 124212841 124361250 - Ulk4 protein_coding processed_transcript MGP_LPJ_T0094977.1 MGP_LPJ_G0035330.1 mouse_genomes_project 9 124217027 124293406 - Ulk4 protein_coding retained_intron MGP_LPJ_T0094978.1 MGP_LPJ_G0035330.1 mouse_genomes_project 9 124217027 124546733 - MGP_LPJ_P0094978 Ulk4 protein_coding protein_coding MGP_LPJ_T0094979.1 MGP_LPJ_G0035330.1 mouse_genomes_project 9 124218977 124546706 - MGP_LPJ_P0094979 Ulk4 protein_coding nonsense_mediated_decay MGP_LPJ_T0094980.1 MGP_LPJ_G0035330.1 mouse_genomes_project 9 124324365 124546717 - MGP_LPJ_P0094980 Ulk4 protein_coding nonsense_mediated_decay MGP_LPJ_T0094981.1 MGP_LPJ_G0035330.1 mouse_genomes_project 9 124324369 124546708 - MGP_LPJ_P0094981 Ulk4 protein_coding protein_coding MGP_LPJ_T0094982.1 MGP_LPJ_G0035330.1 mouse_genomes_project 9 124355606 124546733 - Ulk4 protein_coding retained_intron MGP_LPJ_T0094983.1 MGP_LPJ_G0035330.1 mouse_genomes_project 9 124427356 124510573 - MGP_LPJ_P0094983 Ulk4 protein_coding nonsense_mediated_decay MGP_LPJ_T0091204.1 MGP_LPJ_G0034364.1 mouse_genomes_project 9 19335504 19341375 - MGP_LPJ_P0091204 Tmem205 protein_coding protein_coding MGP_LPJ_T0091205.1 MGP_LPJ_G0034364.1 mouse_genomes_project 9 19335504 19341375 - MGP_LPJ_P0091205 Tmem205 protein_coding protein_coding MGP_LPJ_T0093258.1 MGP_LPJ_G0035001.1 mouse_genomes_project 9 89480862 89530139 - MGP_LPJ_P0093258 Gm20537 protein_coding nonsense_mediated_decay MGP_LPJ_T0093260.1 MGP_LPJ_G0035001.1 mouse_genomes_project 9 89493813 89530024 - MGP_LPJ_P0093260 Gm20537 protein_coding nonsense_mediated_decay MGP_LPJ_T0002460.1 MGP_LPJ_G0002366.1 mouse_genomes_project 9 102891204 102892557 - TEC TEC MGP_LPJ_T0092768.1 MGP_LPJ_G0034895.1 mouse_genomes_project 9 70737181 70787650 - MGP_LPJ_P0092768 Rnf111 protein_coding unknown_likely_coding MGP_LPJ_T0092769.1 MGP_LPJ_G0034895.1 mouse_genomes_project 9 70737188 70819408 - MGP_LPJ_P0092769 Rnf111 protein_coding protein_coding MGP_LPJ_T0092770.1 MGP_LPJ_G0034895.1 mouse_genomes_project 9 70737189 70819037 - MGP_LPJ_P0092770 Rnf111 protein_coding protein_coding MGP_LPJ_T0099813.1 MGP_LPJ_G0038076.1 mouse_genomes_project 9 30410888 30410997 - Gm22060 snRNA snRNA MGP_LPJ_T0002465.1 MGP_LPJ_G0002371.1 mouse_genomes_project 9 103932626 103936995 + TEC TEC MGP_LPJ_T0091530.1 MGP_LPJ_G0034473.1 mouse_genomes_project 9 35967810 35968814 + MGP_LPJ_P0091530 Olfr875 protein_coding protein_coding MGP_LPJ_T0002417.1 MGP_LPJ_G0002324.1 mouse_genomes_project 9 82849046 82849650 + TEC TEC MGP_LPJ_T0092708.1 MGP_LPJ_G0034881.1 mouse_genomes_project 9 67378490 67562849 - MGP_LPJ_P0092708 Tln2 protein_coding unknown_likely_coding MGP_LPJ_T0092709.1 MGP_LPJ_G0034881.1 mouse_genomes_project 9 67378498 67732521 - MGP_LPJ_P0092709 Tln2 protein_coding protein_coding MGP_LPJ_T0092710.1 MGP_LPJ_G0034881.1 mouse_genomes_project 9 67382548 67710705 - MGP_LPJ_P0092710 Tln2 protein_coding protein_coding MGP_LPJ_T0011120.1 MGP_LPJ_G0009238.1 mouse_genomes_project 9 112301574 112301642 + Mir7089 miRNA miRNA MGP_LPJ_T0009238.1 MGP_LPJ_G0007425.1 mouse_genomes_project 9 33572694 33574650 - lincRNA lincRNA MGP_LPJ_T0011121.1 MGP_LPJ_G0009239.1 mouse_genomes_project 9 112715948 112716071 + Mir6236 miRNA miRNA MGP_LPJ_T0011081.1 MGP_LPJ_G0009199.1 mouse_genomes_project 9 47642100 47642187 - Gm23653 miRNA miRNA MGP_LPJ_T0091984.1 MGP_LPJ_G0034674.1 mouse_genomes_project 9 49809950 49814775 - MGP_LPJ_P0091984 Tex12 protein_coding protein_coding MGP_LPJ_T0092875.1 MGP_LPJ_G0034912.1 mouse_genomes_project 9 73053629 73149375 + MGP_LPJ_P0092875 Nedd4 protein_coding protein_coding MGP_LPJ_T0092876.1 MGP_LPJ_G0034912.1 mouse_genomes_project 9 73053721 73067926 + Nedd4 protein_coding retained_intron MGP_LPJ_T0092877.1 MGP_LPJ_G0034912.1 mouse_genomes_project 9 73053765 73119043 + MGP_LPJ_P0092877 Nedd4 protein_coding protein_coding MGP_LPJ_T0092878.1 MGP_LPJ_G0034912.1 mouse_genomes_project 9 73053770 73108792 + MGP_LPJ_P0092878 Nedd4 protein_coding protein_coding MGP_LPJ_T0092879.1 MGP_LPJ_G0034912.1 mouse_genomes_project 9 73053773 73054585 + Nedd4 protein_coding processed_transcript MGP_LPJ_T0092880.1 MGP_LPJ_G0034912.1 mouse_genomes_project 9 73061287 73067907 + Nedd4 protein_coding retained_intron MGP_LPJ_T0092881.1 MGP_LPJ_G0034912.1 mouse_genomes_project 9 73061298 73118608 + MGP_LPJ_P0092881 Nedd4 protein_coding protein_coding MGP_LPJ_T0092882.1 MGP_LPJ_G0034912.1 mouse_genomes_project 9 73138992 73147682 + MGP_LPJ_P0092882 Nedd4 protein_coding nonsense_mediated_decay MGP_LPJ_T0092883.1 MGP_LPJ_G0034912.1 mouse_genomes_project 9 73140966 73146674 + Nedd4 protein_coding retained_intron MGP_LPJ_T0092884.1 MGP_LPJ_G0034912.1 mouse_genomes_project 9 73145365 73146786 + Nedd4 protein_coding retained_intron MGP_LPJ_T0005453.1 MGP_LPJ_G0004620.1 mouse_genomes_project 9 34924645 34938995 + Gm26787 antisense antisense MGP_LPJ_T0091026.1 MGP_LPJ_G0034286.1 mouse_genomes_project 9 16321305 16322241 + MGP_LPJ_P0091026 Olfr835 protein_coding protein_coding MGP_LPJ_T0092308.1 MGP_LPJ_G0034780.1 mouse_genomes_project 9 57615500 57695944 + Stra6 protein_coding retained_intron MGP_LPJ_T0092311.1 MGP_LPJ_G0034780.1 mouse_genomes_project 9 57631026 57695135 + MGP_LPJ_P0092311 Stra6 protein_coding protein_coding MGP_LPJ_T0092312.1 MGP_LPJ_G0034780.1 mouse_genomes_project 9 57631101 57693348 + MGP_LPJ_P0092312 Stra6 protein_coding protein_coding MGP_LPJ_T0092315.1 MGP_LPJ_G0034780.1 mouse_genomes_project 9 57681893 57707847 + MGP_LPJ_P0092315 Stra6 protein_coding protein_coding MGP_LPJ_T0092316.1 MGP_LPJ_G0034780.1 mouse_genomes_project 9 57682154 57707845 + MGP_LPJ_P0092316 Stra6 protein_coding protein_coding MGP_LPJ_T0092317.1 MGP_LPJ_G0034780.1 mouse_genomes_project 9 57682306 57694784 + MGP_LPJ_P0092317 Stra6 protein_coding protein_coding MGP_LPJ_T0092318.1 MGP_LPJ_G0034780.1 mouse_genomes_project 9 57684700 57694357 + MGP_LPJ_P0092318 Stra6 protein_coding protein_coding MGP_LPJ_T0092319.1 MGP_LPJ_G0034780.1 mouse_genomes_project 9 57686820 57695109 + MGP_LPJ_P0092319 Stra6 protein_coding protein_coding MGP_LPJ_T0092320.1 MGP_LPJ_G0034780.1 mouse_genomes_project 9 57686878 57695025 + MGP_LPJ_P0092320 Stra6 protein_coding protein_coding MGP_LPJ_T0092321.1 MGP_LPJ_G0034780.1 mouse_genomes_project 9 57686878 57707888 + MGP_LPJ_P0092321 Stra6 protein_coding protein_coding MGP_LPJ_T0092322.1 MGP_LPJ_G0034780.1 mouse_genomes_project 9 57687338 57695031 + MGP_LPJ_P0092322 Stra6 protein_coding protein_coding MGP_LPJ_T0092323.1 MGP_LPJ_G0034780.1 mouse_genomes_project 9 57688577 57695041 + MGP_LPJ_P0092323 Stra6 protein_coding protein_coding MGP_LPJ_T0092324.1 MGP_LPJ_G0034780.1 mouse_genomes_project 9 57688577 57707888 + MGP_LPJ_P0092324 Stra6 protein_coding protein_coding MGP_LPJ_T0092325.1 MGP_LPJ_G0034780.1 mouse_genomes_project 9 57688722 57693279 + MGP_LPJ_P0092325 Stra6 protein_coding protein_coding MGP_LPJ_T0093734.1 MGP_LPJ_G0035099.1 mouse_genomes_project 9 106987201 107013705 + MGP_LPJ_P0093734 Mrpl3 protein_coding protein_coding MGP_LPJ_T0093735.1 MGP_LPJ_G0035099.1 mouse_genomes_project 9 106987201 107010285 + MGP_LPJ_P0093735 Mrpl3 protein_coding protein_coding MGP_LPJ_T0093736.1 MGP_LPJ_G0035099.1 mouse_genomes_project 9 106987232 106995886 + MGP_LPJ_P0093736 Mrpl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0093737.1 MGP_LPJ_G0035099.1 mouse_genomes_project 9 106987232 106989565 + MGP_LPJ_P0093737 Mrpl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0093738.1 MGP_LPJ_G0035099.1 mouse_genomes_project 9 106987263 107011279 + MGP_LPJ_P0093738 Mrpl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0093739.1 MGP_LPJ_G0035099.1 mouse_genomes_project 9 107004932 107007877 + Mrpl3 protein_coding retained_intron MGP_LPJ_T0094908.1 MGP_LPJ_G0035307.1 mouse_genomes_project 9 122451188 122454265 + MGP_LPJ_P0094908 Acaa1a protein_coding protein_coding MGP_LPJ_T0094910.1 MGP_LPJ_G0035307.1 mouse_genomes_project 9 122452548 122456365 + MGP_LPJ_P0094910 Acaa1a protein_coding unknown_likely_coding MGP_LPJ_T0094911.1 MGP_LPJ_G0035307.1 mouse_genomes_project 9 122452559 122459610 + MGP_LPJ_P0094911 Acaa1a protein_coding protein_coding MGP_LPJ_T0094912.1 MGP_LPJ_G0035307.1 mouse_genomes_project 9 122452806 122461609 + MGP_LPJ_P0094912 Acaa1a protein_coding protein_coding MGP_LPJ_T0094913.1 MGP_LPJ_G0035307.1 mouse_genomes_project 9 122452926 122461608 + Acaa1a protein_coding retained_intron MGP_LPJ_T0094914.1 MGP_LPJ_G0035307.1 mouse_genomes_project 9 122452969 122456457 + Acaa1a protein_coding retained_intron MGP_LPJ_T0094915.1 MGP_LPJ_G0035307.1 mouse_genomes_project 9 122453027 122461343 + MGP_LPJ_P0094915 Acaa1a protein_coding protein_coding MGP_LPJ_T0094916.1 MGP_LPJ_G0035307.1 mouse_genomes_project 9 122454285 122460927 + MGP_LPJ_P0094916 Acaa1a protein_coding nonsense_mediated_decay MGP_LPJ_T0094917.1 MGP_LPJ_G0035307.1 mouse_genomes_project 9 122457846 122460582 + Acaa1a protein_coding retained_intron MGP_LPJ_T0094918.1 MGP_LPJ_G0035307.1 mouse_genomes_project 9 122460331 122460863 + Acaa1a protein_coding retained_intron MGP_LPJ_T0016094.1 MGP_LPJ_G0014185.1 mouse_genomes_project 9 102063036 102063301 + processed_pseudogene processed_pseudogene MGP_LPJ_T0090969.1 MGP_LPJ_G0034262.1 mouse_genomes_project 9 12365741 12386292 - MGP_LPJ_P0090969 4931406C07Rik protein_coding protein_coding MGP_LPJ_T0090970.1 MGP_LPJ_G0034262.1 mouse_genomes_project 9 12365741 12391101 - MGP_LPJ_P0090970 4931406C07Rik protein_coding protein_coding MGP_LPJ_T0090971.1 MGP_LPJ_G0034262.1 mouse_genomes_project 9 12365741 12390820 - MGP_LPJ_P0090971 4931406C07Rik protein_coding protein_coding MGP_LPJ_T0093890.1 MGP_LPJ_G0035125.1 mouse_genomes_project 9 108532096 108575511 - Iqcf3 protein_coding processed_transcript MGP_LPJ_T0093892.1 MGP_LPJ_G0035125.1 mouse_genomes_project 9 108574207 108593979 - MGP_LPJ_P0093892 Iqcf3 protein_coding protein_coding MGP_LPJ_T0093893.1 MGP_LPJ_G0035125.1 mouse_genomes_project 9 108574616 108593977 - MGP_LPJ_P0093893 Iqcf3 protein_coding protein_coding MGP_LPJ_T0093894.1 MGP_LPJ_G0035125.1 mouse_genomes_project 9 108583954 108593947 - MGP_LPJ_P0093894 Iqcf3 protein_coding protein_coding MGP_LPJ_T0093895.1 MGP_LPJ_G0035125.1 mouse_genomes_project 9 108585514 108593947 - MGP_LPJ_P0093895 Iqcf3 protein_coding protein_coding MGP_LPJ_T0009258.1 MGP_LPJ_G0007439.1 mouse_genomes_project 9 48233574 48237699 - 1700042D02Rik lincRNA lincRNA MGP_LPJ_T0002425.1 MGP_LPJ_G0002331.1 mouse_genomes_project 9 87769353 87771884 + TEC TEC MGP_LPJ_T0101106.1 MGP_LPJ_G0039369.1 mouse_genomes_project 9 64111132 64111202 + Gm22571 snoRNA snoRNA MGP_LPJ_T0090997.1 MGP_LPJ_G0034269.1 mouse_genomes_project 9 13047372 13561557 - MGP_LPJ_P0090997 Fat3 protein_coding protein_coding MGP_LPJ_T0091289.1 MGP_LPJ_G0034401.1 mouse_genomes_project 9 24629433 24646041 - Acad8 protein_coding retained_intron MGP_LPJ_T0091290.1 MGP_LPJ_G0034401.1 mouse_genomes_project 9 24629433 24655296 - MGP_LPJ_P0091290 Acad8 protein_coding protein_coding MGP_LPJ_T0091291.1 MGP_LPJ_G0034401.1 mouse_genomes_project 9 24629442 24655280 - MGP_LPJ_P0091291 Acad8 protein_coding protein_coding MGP_LPJ_T0091292.1 MGP_LPJ_G0034401.1 mouse_genomes_project 9 24630673 24633256 - Acad8 protein_coding retained_intron MGP_LPJ_T0091293.1 MGP_LPJ_G0034401.1 mouse_genomes_project 9 24634499 24655239 - MGP_LPJ_P0091293 Acad8 protein_coding nonsense_mediated_decay MGP_LPJ_T0091294.1 MGP_LPJ_G0034401.1 mouse_genomes_project 9 24634560 24655237 - MGP_LPJ_P0091294 Acad8 protein_coding nonsense_mediated_decay MGP_LPJ_T0091295.1 MGP_LPJ_G0034401.1 mouse_genomes_project 9 24646010 24655236 - Acad8 protein_coding retained_intron MGP_LPJ_T0093384.1 MGP_LPJ_G0035029.1 mouse_genomes_project 9 97035523 97096295 + MGP_LPJ_P0093384 Pcolce2 protein_coding protein_coding MGP_LPJ_T0093385.1 MGP_LPJ_G0035029.1 mouse_genomes_project 9 97078509 97092881 + Pcolce2 protein_coding processed_transcript MGP_LPJ_T0091949.1 MGP_LPJ_G0034656.1 mouse_genomes_project 9 47623880 47630499 - MGP_LPJ_P0091949 Rbm7 protein_coding protein_coding MGP_LPJ_T0091957.1 MGP_LPJ_G0034660.1 mouse_genomes_project 9 48064189 48076072 - MGP_LPJ_P0091957 Htr3a protein_coding protein_coding MGP_LPJ_T0091958.1 MGP_LPJ_G0034660.1 mouse_genomes_project 9 48064666 48075938 - MGP_LPJ_P0091958 Htr3a protein_coding unknown_likely_coding MGP_LPJ_T0005498.1 MGP_LPJ_G0004649.1 mouse_genomes_project 9 72807983 72808685 - Gm27231 antisense antisense MGP_LPJ_T0093961.1 MGP_LPJ_G0035140.1 mouse_genomes_project 9 109471066 109609327 + MGP_LPJ_P0093961 Cacna2d2 protein_coding protein_coding MGP_LPJ_T0093962.1 MGP_LPJ_G0035140.1 mouse_genomes_project 9 109471066 109609327 + MGP_LPJ_P0093962 Cacna2d2 protein_coding protein_coding MGP_LPJ_T0093963.1 MGP_LPJ_G0035140.1 mouse_genomes_project 9 109471307 109608975 + MGP_LPJ_P0093963 Cacna2d2 protein_coding protein_coding MGP_LPJ_T0093964.1 MGP_LPJ_G0035140.1 mouse_genomes_project 9 109471307 109609327 + MGP_LPJ_P0093964 Cacna2d2 protein_coding protein_coding MGP_LPJ_T0093965.1 MGP_LPJ_G0035140.1 mouse_genomes_project 9 109471484 109609328 + MGP_LPJ_P0093965 Cacna2d2 protein_coding protein_coding MGP_LPJ_T0093966.1 MGP_LPJ_G0035140.1 mouse_genomes_project 9 109471509 109607475 + MGP_LPJ_P0093966 Cacna2d2 protein_coding protein_coding MGP_LPJ_T0093967.1 MGP_LPJ_G0035140.1 mouse_genomes_project 9 109583778 109593406 + Cacna2d2 protein_coding processed_transcript MGP_LPJ_T0093968.1 MGP_LPJ_G0035140.1 mouse_genomes_project 9 109589155 109593768 + Cacna2d2 protein_coding processed_transcript MGP_LPJ_T0093969.1 MGP_LPJ_G0035140.1 mouse_genomes_project 9 109601521 109603495 + Cacna2d2 protein_coding retained_intron MGP_LPJ_T0093970.1 MGP_LPJ_G0035140.1 mouse_genomes_project 9 109606667 109607578 + Cacna2d2 protein_coding retained_intron MGP_LPJ_T0094820.1 MGP_LPJ_G0035284.1 mouse_genomes_project 9 117590936 117658183 - MGP_LPJ_P0094820 Cmtm8 protein_coding protein_coding MGP_LPJ_T0090883.1 MGP_LPJ_G0034232.1 mouse_genomes_project 9 5002832 5068623 - MGP_LPJ_P0090883 Cep126 protein_coding protein_coding MGP_LPJ_T0091255.1 MGP_LPJ_G0034389.1 mouse_genomes_project 9 21648934 21853643 + MGP_LPJ_P0091255 Npsr1 protein_coding protein_coding MGP_LPJ_T0091256.1 MGP_LPJ_G0034389.1 mouse_genomes_project 9 21648956 21880453 + MGP_LPJ_P0091256 Npsr1 protein_coding protein_coding MGP_LPJ_T0091257.1 MGP_LPJ_G0034389.1 mouse_genomes_project 9 21820219 21877868 + MGP_LPJ_P0091257 Npsr1 protein_coding protein_coding MGP_LPJ_T0091258.1 MGP_LPJ_G0034389.1 mouse_genomes_project 9 21864433 21878926 + Npsr1 protein_coding processed_transcript MGP_LPJ_T0091450.1 MGP_LPJ_G0034452.1 mouse_genomes_project 9 34846915 34852540 + MGP_LPJ_P0091450 Acrv1 protein_coding protein_coding MGP_LPJ_T0091451.1 MGP_LPJ_G0034452.1 mouse_genomes_project 9 34846949 34851063 + Acrv1 protein_coding retained_intron MGP_LPJ_T0005577.1 MGP_LPJ_G0004706.1 mouse_genomes_project 9 114083738 114084352 + Gm43236 antisense antisense MGP_LPJ_T0092597.1 MGP_LPJ_G0034859.1 mouse_genomes_project 9 65604851 65614806 + MGP_LPJ_P0092597 Pif1 protein_coding protein_coding MGP_LPJ_T0092598.1 MGP_LPJ_G0034859.1 mouse_genomes_project 9 65604873 65605529 + MGP_LPJ_P0092598 Pif1 protein_coding protein_coding MGP_LPJ_T0092599.1 MGP_LPJ_G0034859.1 mouse_genomes_project 9 65604884 65614804 + MGP_LPJ_P0092599 Pif1 protein_coding nonsense_mediated_decay MGP_LPJ_T0092600.1 MGP_LPJ_G0034859.1 mouse_genomes_project 9 65604896 65608184 + Pif1 protein_coding retained_intron MGP_LPJ_T0092601.1 MGP_LPJ_G0034859.1 mouse_genomes_project 9 65604896 65614809 + MGP_LPJ_P0092601 Pif1 protein_coding protein_coding MGP_LPJ_T0092602.1 MGP_LPJ_G0034859.1 mouse_genomes_project 9 65604904 65614809 + Pif1 protein_coding retained_intron MGP_LPJ_T0092603.1 MGP_LPJ_G0034859.1 mouse_genomes_project 9 65604912 65614809 + MGP_LPJ_P0092603 Pif1 protein_coding protein_coding MGP_LPJ_T0092604.1 MGP_LPJ_G0034859.1 mouse_genomes_project 9 65604917 65605972 + MGP_LPJ_P0092604 Pif1 protein_coding protein_coding MGP_LPJ_T0093504.1 MGP_LPJ_G0035051.1 mouse_genomes_project 9 100486078 100487582 + MGP_LPJ_P0093504 7420426K07Rik protein_coding protein_coding MGP_LPJ_T0091512.1 MGP_LPJ_G0034464.1 mouse_genomes_project 9 35661551 35699447 + MGP_LPJ_P0091512 Msantd2 protein_coding protein_coding MGP_LPJ_T0005580.1 MGP_LPJ_G0004709.1 mouse_genomes_project 9 118014635 118016091 - Gm26962 antisense antisense MGP_LPJ_T0101101.1 MGP_LPJ_G0039364.1 mouse_genomes_project 9 51602320 51602453 + Gm25562 snoRNA snoRNA MGP_LPJ_T0099870.1 MGP_LPJ_G0038133.1 mouse_genomes_project 9 121494954 121495035 - Gm22479 snRNA snRNA MGP_LPJ_T0091931.1 MGP_LPJ_G0034650.1 mouse_genomes_project 9 46038542 46040392 + MGP_LPJ_P0091931 Gm4791 protein_coding protein_coding MGP_LPJ_T0002467.1 MGP_LPJ_G0002373.1 mouse_genomes_project 9 104478746 104481575 - TEC TEC MGP_LPJ_T0091742.1 MGP_LPJ_G0034593.1 mouse_genomes_project 9 43047964 43053345 - Abcg4 protein_coding retained_intron MGP_LPJ_T0091743.1 MGP_LPJ_G0034593.1 mouse_genomes_project 9 43047964 43061682 - MGP_LPJ_P0091743 Abcg4 protein_coding protein_coding MGP_LPJ_T0091744.1 MGP_LPJ_G0034593.1 mouse_genomes_project 9 43047966 43062752 - MGP_LPJ_P0091744 Abcg4 protein_coding protein_coding MGP_LPJ_T0091745.1 MGP_LPJ_G0034593.1 mouse_genomes_project 9 43049228 43054569 - Abcg4 protein_coding retained_intron MGP_LPJ_T0091746.1 MGP_LPJ_G0034593.1 mouse_genomes_project 9 43049871 43054331 - MGP_LPJ_P0091746 Abcg4 protein_coding nonsense_mediated_decay MGP_LPJ_T0091747.1 MGP_LPJ_G0034593.1 mouse_genomes_project 9 43051818 43061674 - Abcg4 protein_coding processed_transcript MGP_LPJ_T0091748.1 MGP_LPJ_G0034593.1 mouse_genomes_project 9 43052239 43054522 - Abcg4 protein_coding retained_intron MGP_LPJ_T0091749.1 MGP_LPJ_G0034593.1 mouse_genomes_project 9 43055378 43056401 - Abcg4 protein_coding retained_intron MGP_LPJ_T0091750.1 MGP_LPJ_G0034593.1 mouse_genomes_project 9 43056588 43062492 - MGP_LPJ_P0091750 Abcg4 protein_coding protein_coding MGP_LPJ_T0091751.1 MGP_LPJ_G0034593.1 mouse_genomes_project 9 43056651 43062273 - MGP_LPJ_P0091751 Abcg4 protein_coding protein_coding MGP_LPJ_T0091241.1 MGP_LPJ_G0034386.1 mouse_genomes_project 9 19955662 19964958 + MGP_LPJ_P0091241 Gm17545 protein_coding protein_coding MGP_LPJ_T0091909.1 MGP_LPJ_G0034643.1 mouse_genomes_project 9 45177187 45179074 + MGP_LPJ_P0091909 Apoa1 protein_coding protein_coding MGP_LPJ_T0091910.1 MGP_LPJ_G0034643.1 mouse_genomes_project 9 45177328 45178581 + Apoa1 protein_coding retained_intron MGP_LPJ_T0005443.1 MGP_LPJ_G0004612.1 mouse_genomes_project 9 18447939 18486648 + 1700084C06Rik antisense antisense MGP_LPJ_T0002392.1 MGP_LPJ_G0002299.1 mouse_genomes_project 9 72346374 72348800 - TEC TEC MGP_LPJ_T0094243.1 MGP_LPJ_G0035180.1 mouse_genomes_project 9 110451312 110485254 + MGP_LPJ_P0094243 Rhoa protein_coding protein_coding MGP_LPJ_T0094244.1 MGP_LPJ_G0035180.1 mouse_genomes_project 9 110451330 110456451 + Rhoa protein_coding retained_intron MGP_LPJ_T0094245.1 MGP_LPJ_G0035180.1 mouse_genomes_project 9 110451720 110478076 + MGP_LPJ_P0094245 Rhoa protein_coding protein_coding MGP_LPJ_T0094246.1 MGP_LPJ_G0035180.1 mouse_genomes_project 9 110477719 110483866 + Rhoa protein_coding retained_intron MGP_LPJ_T0018544.1 MGP_LPJ_G0015681.1 mouse_genomes_project 9 117123798 117147340 + processed_transcript processed_transcript MGP_LPJ_T0018545.1 MGP_LPJ_G0015681.1 mouse_genomes_project 9 117123826 117146557 + processed_transcript processed_transcript MGP_LPJ_T0018546.1 MGP_LPJ_G0015681.1 mouse_genomes_project 9 117123918 117126659 + processed_transcript processed_transcript MGP_LPJ_T0016119.1 MGP_LPJ_G0014210.1 mouse_genomes_project 9 112340112 112340512 - processed_pseudogene processed_pseudogene MGP_LPJ_T0090933.1 MGP_LPJ_G0034248.1 mouse_genomes_project 9 11497347 11534815 - MGP_LPJ_P0090933 Kdm4d protein_coding protein_coding MGP_LPJ_T0092280.1 MGP_LPJ_G0034771.1 mouse_genomes_project 9 57204682 57211393 - MGP_LPJ_P0092280 Cyp1a2 protein_coding protein_coding MGP_LPJ_T0093596.1 MGP_LPJ_G0035072.1 mouse_genomes_project 9 102805086 102958649 - MGP_LPJ_P0093596 Ppp2r3a protein_coding protein_coding MGP_LPJ_T0093597.1 MGP_LPJ_G0035072.1 mouse_genomes_project 9 102805288 102903714 - MGP_LPJ_P0093597 Ppp2r3a protein_coding protein_coding MGP_LPJ_T0093598.1 MGP_LPJ_G0035072.1 mouse_genomes_project 9 102807885 102827409 - Ppp2r3a protein_coding processed_transcript MGP_LPJ_T0093599.1 MGP_LPJ_G0035072.1 mouse_genomes_project 9 102826528 102903492 - Ppp2r3a protein_coding retained_intron MGP_LPJ_T0093600.1 MGP_LPJ_G0035072.1 mouse_genomes_project 9 102897222 102903646 - Ppp2r3a protein_coding retained_intron MGP_LPJ_T0093601.1 MGP_LPJ_G0035072.1 mouse_genomes_project 9 102902106 102907544 - Ppp2r3a protein_coding retained_intron MGP_LPJ_T0093602.1 MGP_LPJ_G0035072.1 mouse_genomes_project 9 102913176 102918821 - Ppp2r3a protein_coding processed_transcript MGP_LPJ_T0016008.1 MGP_LPJ_G0014099.1 mouse_genomes_project 9 63323597 63324507 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091994.1 MGP_LPJ_G0034679.1 mouse_genomes_project 9 49877652 49885354 + MGP_LPJ_P0091994 Pih1d2 protein_coding protein_coding MGP_LPJ_T0091995.1 MGP_LPJ_G0034679.1 mouse_genomes_project 9 49877664 49882866 + Pih1d2 protein_coding retained_intron MGP_LPJ_T0091996.1 MGP_LPJ_G0034679.1 mouse_genomes_project 9 49877668 49882115 + MGP_LPJ_P0091996 Pih1d2 protein_coding protein_coding MGP_LPJ_T0091997.1 MGP_LPJ_G0034679.1 mouse_genomes_project 9 49877714 49885357 + MGP_LPJ_P0091997 Pih1d2 protein_coding nonsense_mediated_decay MGP_LPJ_T0091998.1 MGP_LPJ_G0034679.1 mouse_genomes_project 9 49877852 49879151 + Pih1d2 protein_coding retained_intron MGP_LPJ_T0091999.1 MGP_LPJ_G0034679.1 mouse_genomes_project 9 49877881 49881537 + MGP_LPJ_P0091999 Pih1d2 protein_coding protein_coding MGP_LPJ_T0092000.1 MGP_LPJ_G0034679.1 mouse_genomes_project 9 49878339 49881412 + MGP_LPJ_P0092000 Pih1d2 protein_coding protein_coding MGP_LPJ_T0009321.1 MGP_LPJ_G0007488.1 mouse_genomes_project 9 96013841 96015452 - Gm29395 lincRNA lincRNA MGP_LPJ_T0091210.1 MGP_LPJ_G0034367.1 mouse_genomes_project 9 19375370 19377752 + MGP_LPJ_P0091210 Swsap1 protein_coding protein_coding MGP_LPJ_T0093939.1 MGP_LPJ_G0035136.1 mouse_genomes_project 9 109317604 109354391 - MGP_LPJ_P0093939 Mapkapk3 protein_coding protein_coding MGP_LPJ_T0093940.1 MGP_LPJ_G0035136.1 mouse_genomes_project 9 109317612 109354261 - Mapkapk3 protein_coding retained_intron MGP_LPJ_T0093941.1 MGP_LPJ_G0035136.1 mouse_genomes_project 9 109318722 109319969 - Mapkapk3 protein_coding retained_intron MGP_LPJ_T0093942.1 MGP_LPJ_G0035136.1 mouse_genomes_project 9 109318861 109353858 - MGP_LPJ_P0093942 Mapkapk3 protein_coding protein_coding MGP_LPJ_T0093943.1 MGP_LPJ_G0035136.1 mouse_genomes_project 9 109321454 109325784 - Mapkapk3 protein_coding processed_transcript MGP_LPJ_T0093944.1 MGP_LPJ_G0035136.1 mouse_genomes_project 9 109322227 109354293 - Mapkapk3 protein_coding retained_intron MGP_LPJ_T0093945.1 MGP_LPJ_G0035136.1 mouse_genomes_project 9 109327572 109345509 - MGP_LPJ_P0093945 Mapkapk3 protein_coding protein_coding MGP_LPJ_T0093946.1 MGP_LPJ_G0035136.1 mouse_genomes_project 9 109349222 109354293 - Mapkapk3 protein_coding processed_transcript MGP_LPJ_T0093103.1 MGP_LPJ_G0034972.1 mouse_genomes_project 9 80973614 81136076 + MGP_LPJ_P0093103 Myo6 protein_coding protein_coding MGP_LPJ_T0093104.1 MGP_LPJ_G0034972.1 mouse_genomes_project 9 80973621 80976608 + Myo6 protein_coding retained_intron MGP_LPJ_T0093105.1 MGP_LPJ_G0034972.1 mouse_genomes_project 9 80973623 81136075 + MGP_LPJ_P0093105 Myo6 protein_coding protein_coding MGP_LPJ_T0093106.1 MGP_LPJ_G0034972.1 mouse_genomes_project 9 80973810 81132442 + MGP_LPJ_P0093106 Myo6 protein_coding protein_coding MGP_LPJ_T0093107.1 MGP_LPJ_G0034972.1 mouse_genomes_project 9 81032884 81132395 + MGP_LPJ_P0093107 Myo6 protein_coding protein_coding MGP_LPJ_T0093108.1 MGP_LPJ_G0034972.1 mouse_genomes_project 9 81032902 81136076 + MGP_LPJ_P0093108 Myo6 protein_coding protein_coding MGP_LPJ_T0093109.1 MGP_LPJ_G0034972.1 mouse_genomes_project 9 81032910 81136076 + MGP_LPJ_P0093109 Myo6 protein_coding protein_coding MGP_LPJ_T0093110.1 MGP_LPJ_G0034972.1 mouse_genomes_project 9 81085904 81090679 + Myo6 protein_coding retained_intron MGP_LPJ_T0093111.1 MGP_LPJ_G0034972.1 mouse_genomes_project 9 81109464 81110559 + Myo6 protein_coding retained_intron MGP_LPJ_T0093112.1 MGP_LPJ_G0034972.1 mouse_genomes_project 9 81110331 81116654 + Myo6 protein_coding retained_intron MGP_LPJ_T0093113.1 MGP_LPJ_G0034972.1 mouse_genomes_project 9 81130109 81132140 + Myo6 protein_coding processed_transcript MGP_LPJ_T0093114.1 MGP_LPJ_G0034972.1 mouse_genomes_project 9 81131258 81132948 + Myo6 protein_coding retained_intron MGP_LPJ_T0101094.1 MGP_LPJ_G0039357.1 mouse_genomes_project 9 39322638 39322724 + Snord14c snoRNA snoRNA MGP_LPJ_T0091038.1 MGP_LPJ_G0034298.1 mouse_genomes_project 9 16909397 16910389 + MGP_LPJ_P0091038 Olfr855 protein_coding protein_coding MGP_LPJ_T0005515.1 MGP_LPJ_G0004661.1 mouse_genomes_project 9 87752799 87758585 + A330041J22Rik antisense antisense MGP_LPJ_T0091737.1 MGP_LPJ_G0034590.1 mouse_genomes_project 9 43010024 43016687 + MGP_LPJ_P0091737 Ccdc153 protein_coding protein_coding MGP_LPJ_T0005541.1 MGP_LPJ_G0004677.1 mouse_genomes_project 9 105306083 105326913 + Gm16252 antisense antisense MGP_LPJ_T0101090.1 MGP_LPJ_G0039353.1 mouse_genomes_project 9 33196767 33196911 + Gm24262 snoRNA snoRNA MGP_LPJ_T0091527.1 MGP_LPJ_G0034471.1 mouse_genomes_project 9 35838632 35847858 - MGP_LPJ_P0091527 Panx3 protein_coding protein_coding MGP_LPJ_T0091528.1 MGP_LPJ_G0034471.1 mouse_genomes_project 9 35842856 35847809 - MGP_LPJ_P0091528 Panx3 protein_coding nonsense_mediated_decay MGP_LPJ_T0018459.1 MGP_LPJ_G0015651.1 mouse_genomes_project 9 34269442 34271509 - Gm3428 processed_transcript TEC MGP_LPJ_T0018460.1 MGP_LPJ_G0015651.1 mouse_genomes_project 9 34270120 34271453 - Gm3428 processed_transcript lincRNA MGP_LPJ_T0018461.1 MGP_LPJ_G0015651.1 mouse_genomes_project 9 34270161 34271505 - Gm3428 processed_transcript lincRNA MGP_LPJ_T0091496.1 MGP_LPJ_G0034458.1 mouse_genomes_project 9 35390095 35405990 + MGP_LPJ_P0091496 Tmem218 protein_coding protein_coding MGP_LPJ_T0091301.1 MGP_LPJ_G0034406.1 mouse_genomes_project 9 24976898 25008311 + MGP_LPJ_P0091301 Igsf9b protein_coding protein_coding MGP_LPJ_T0091302.1 MGP_LPJ_G0034406.1 mouse_genomes_project 9 24976900 25012939 + MGP_LPJ_P0091302 Igsf9b protein_coding protein_coding MGP_LPJ_T0091303.1 MGP_LPJ_G0034406.1 mouse_genomes_project 9 24977124 25029153 + MGP_LPJ_P0091303 Igsf9b protein_coding unknown_likely_coding MGP_LPJ_T0091843.1 MGP_LPJ_G0034624.1 mouse_genomes_project 9 43918409 43950363 + MGP_LPJ_P0091843 Amica1 protein_coding protein_coding MGP_LPJ_T0002398.1 MGP_LPJ_G0002305.1 mouse_genomes_project 9 72745786 72748538 + TEC TEC MGP_LPJ_T0016100.1 MGP_LPJ_G0014191.1 mouse_genomes_project 9 103163178 103164033 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009299.1 MGP_LPJ_G0007474.1 mouse_genomes_project 9 84104632 84118258 - Gm27216 lincRNA lincRNA MGP_LPJ_T0009300.1 MGP_LPJ_G0007474.1 mouse_genomes_project 9 84104642 84118776 - Gm27216 lincRNA lincRNA MGP_LPJ_T0009301.1 MGP_LPJ_G0007474.1 mouse_genomes_project 9 84104659 84118723 - Gm27216 lincRNA lincRNA MGP_LPJ_T0098432.1 MGP_LPJ_G0036713.1 mouse_genomes_project 9 64239798 64239933 + Gm24289 scaRNA scaRNA MGP_LPJ_T0005538.1 MGP_LPJ_G0004674.1 mouse_genomes_project 9 100149118 100150374 + Gm37637 antisense antisense MGP_LPJ_T0016041.1 MGP_LPJ_G0014132.1 mouse_genomes_project 9 80875810 80876138 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002492.1 MGP_LPJ_G0002398.1 mouse_genomes_project 9 112764779 112767366 - TEC TEC MGP_LPJ_T0002437.1 MGP_LPJ_G0002343.1 mouse_genomes_project 9 92559296 92561120 - TEC TEC MGP_LPJ_T0016034.1 MGP_LPJ_G0014125.1 mouse_genomes_project 9 77629072 77629277 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091123.1 MGP_LPJ_G0034335.1 mouse_genomes_project 9 18386787 18393751 + MGP_LPJ_P0091123 Icam5 protein_coding protein_coding MGP_LPJ_T0005463.1 MGP_LPJ_G0004628.1 mouse_genomes_project 9 45191194 45192091 - Gm10680 antisense antisense MGP_LPJ_T0005589.1 MGP_LPJ_G0004714.1 mouse_genomes_project 9 125122029 125132936 + Gm17163 antisense antisense MGP_LPJ_T0091042.1 MGP_LPJ_G0034302.1 mouse_genomes_project 9 17130084 17131012 + MGP_LPJ_P0091042 protein_coding protein_coding MGP_LPJ_T0092463.1 MGP_LPJ_G0034816.1 mouse_genomes_project 9 62158567 62209807 + Anp32a protein_coding processed_transcript MGP_LPJ_T0092464.1 MGP_LPJ_G0034816.1 mouse_genomes_project 9 62158603 62212433 + MGP_LPJ_P0092464 Anp32a protein_coding protein_coding MGP_LPJ_T0092465.1 MGP_LPJ_G0034816.1 mouse_genomes_project 9 62159175 62206858 + MGP_LPJ_P0092465 Anp32a protein_coding protein_coding MGP_LPJ_T0092466.1 MGP_LPJ_G0034816.1 mouse_genomes_project 9 62159348 62209778 + MGP_LPJ_P0092466 Anp32a protein_coding protein_coding MGP_LPJ_T0092467.1 MGP_LPJ_G0034816.1 mouse_genomes_project 9 62159737 62205723 + MGP_LPJ_P0092467 Anp32a protein_coding protein_coding MGP_LPJ_T0092468.1 MGP_LPJ_G0034816.1 mouse_genomes_project 9 62161336 62205736 + Anp32a protein_coding processed_transcript MGP_LPJ_T0092469.1 MGP_LPJ_G0034816.1 mouse_genomes_project 9 62162067 62206855 + Anp32a protein_coding processed_transcript MGP_LPJ_T0092470.1 MGP_LPJ_G0034816.1 mouse_genomes_project 9 62185888 62205816 + Anp32a protein_coding processed_transcript MGP_LPJ_T0092471.1 MGP_LPJ_G0034816.1 mouse_genomes_project 9 62185894 62209413 + Anp32a protein_coding processed_transcript MGP_LPJ_T0092472.1 MGP_LPJ_G0034816.1 mouse_genomes_project 9 62205578 62211401 + Anp32a protein_coding retained_intron MGP_LPJ_T0092605.1 MGP_LPJ_G0034860.1 mouse_genomes_project 9 65650968 65682711 + MGP_LPJ_P0092605 Rbpms2 protein_coding unknown_likely_coding MGP_LPJ_T0092606.1 MGP_LPJ_G0034860.1 mouse_genomes_project 9 65650983 65683482 + MGP_LPJ_P0092606 Rbpms2 protein_coding protein_coding MGP_LPJ_T0005447.1 MGP_LPJ_G0004614.1 mouse_genomes_project 9 21860238 21864357 - Gm15600 antisense antisense MGP_LPJ_T0092928.1 MGP_LPJ_G0034925.1 mouse_genomes_project 9 74614145 74651772 + Wdr72 protein_coding processed_transcript MGP_LPJ_T0092929.1 MGP_LPJ_G0034925.1 mouse_genomes_project 9 74614145 74794426 + MGP_LPJ_P0092929 Wdr72 protein_coding protein_coding MGP_LPJ_T0092930.1 MGP_LPJ_G0034925.1 mouse_genomes_project 9 74614193 74617297 + Wdr72 protein_coding processed_transcript MGP_LPJ_T0092931.1 MGP_LPJ_G0034925.1 mouse_genomes_project 9 74642451 74792946 + MGP_LPJ_P0092931 Wdr72 protein_coding unknown_likely_coding MGP_LPJ_T0092932.1 MGP_LPJ_G0034925.1 mouse_genomes_project 9 74784817 74794531 + Wdr72 protein_coding processed_transcript MGP_LPJ_T0095083.1 MGP_LPJ_G0035365.1 mouse_genomes_project 9 126627135 126628867 - MGP_LPJ_P0095083 Tmem158 protein_coding protein_coding MGP_LPJ_T0011763.1 MGP_LPJ_G0009881.1 mouse_genomes_project 9 116039977 116040274 + Gm22492 misc_RNA misc_RNA MGP_LPJ_T0093623.1 MGP_LPJ_G0035078.1 mouse_genomes_project 9 104501230 104505280 + MGP_LPJ_P0093623 Amotl2 protein_coding protein_coding MGP_LPJ_T0093624.1 MGP_LPJ_G0035078.1 mouse_genomes_project 9 104501360 104517971 + MGP_LPJ_P0093624 Amotl2 protein_coding protein_coding MGP_LPJ_T0093625.1 MGP_LPJ_G0035078.1 mouse_genomes_project 9 104501847 104505292 + MGP_LPJ_P0093625 Amotl2 protein_coding protein_coding MGP_LPJ_T0093626.1 MGP_LPJ_G0035078.1 mouse_genomes_project 9 104502226 104517976 + MGP_LPJ_P0093626 Amotl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0093627.1 MGP_LPJ_G0035078.1 mouse_genomes_project 9 104502987 104504951 + MGP_LPJ_P0093627 Amotl2 protein_coding protein_coding MGP_LPJ_T0093628.1 MGP_LPJ_G0035078.1 mouse_genomes_project 9 104503028 104504959 + MGP_LPJ_P0093628 Amotl2 protein_coding protein_coding MGP_LPJ_T0093629.1 MGP_LPJ_G0035078.1 mouse_genomes_project 9 104503043 104504771 + MGP_LPJ_P0093629 Amotl2 protein_coding protein_coding MGP_LPJ_T0093630.1 MGP_LPJ_G0035078.1 mouse_genomes_project 9 104503063 104516264 + MGP_LPJ_P0093630 Amotl2 protein_coding protein_coding MGP_LPJ_T0093631.1 MGP_LPJ_G0035078.1 mouse_genomes_project 9 104503126 104513060 + MGP_LPJ_P0093631 Amotl2 protein_coding protein_coding MGP_LPJ_T0093632.1 MGP_LPJ_G0035078.1 mouse_genomes_project 9 104506861 104512883 + Amotl2 protein_coding processed_transcript MGP_LPJ_T0093633.1 MGP_LPJ_G0035078.1 mouse_genomes_project 9 104507079 104517976 + Amotl2 protein_coding retained_intron MGP_LPJ_T0093634.1 MGP_LPJ_G0035078.1 mouse_genomes_project 9 104512887 104516899 + Amotl2 protein_coding processed_transcript MGP_LPJ_T0093635.1 MGP_LPJ_G0035078.1 mouse_genomes_project 9 104515288 104516885 + Amotl2 protein_coding retained_intron MGP_LPJ_T0002376.1 MGP_LPJ_G0002283.1 mouse_genomes_project 9 30496841 30498643 - TEC TEC MGP_LPJ_T0091519.1 MGP_LPJ_G0034467.1 mouse_genomes_project 9 35719753 35728152 - MGP_LPJ_P0091519 Nrgn protein_coding protein_coding MGP_LPJ_T0091520.1 MGP_LPJ_G0034467.1 mouse_genomes_project 9 35720221 35721405 - Nrgn protein_coding processed_transcript MGP_LPJ_T0094806.1 MGP_LPJ_G0035272.1 mouse_genomes_project 9 116742415 116785930 + MGP_LPJ_P0094806 Susd5 protein_coding protein_coding MGP_LPJ_T0092935.1 MGP_LPJ_G0034927.1 mouse_genomes_project 9 75483437 75567052 + MGP_LPJ_P0092935 Fam214a protein_coding protein_coding MGP_LPJ_T0092936.1 MGP_LPJ_G0034927.1 mouse_genomes_project 9 75505794 75567052 + MGP_LPJ_P0092936 Fam214a protein_coding protein_coding MGP_LPJ_T0091267.1 MGP_LPJ_G0034393.1 mouse_genomes_project 9 22290933 22345699 - MGP_LPJ_P0091267 Tbx20 protein_coding protein_coding MGP_LPJ_T0091268.1 MGP_LPJ_G0034393.1 mouse_genomes_project 9 22311823 22345699 - MGP_LPJ_P0091268 Tbx20 protein_coding protein_coding MGP_LPJ_T0099839.1 MGP_LPJ_G0038102.1 mouse_genomes_project 9 70839427 70839534 - Gm23730 snRNA snRNA MGP_LPJ_T0005559.1 MGP_LPJ_G0004691.1 mouse_genomes_project 9 109629212 109632391 - Gm34106 antisense antisense MGP_LPJ_T0015989.1 MGP_LPJ_G0014080.1 mouse_genomes_project 9 33631957 33632246 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005582.1 MGP_LPJ_G0004711.1 mouse_genomes_project 9 121936443 121974656 - Gm2415 antisense antisense MGP_LPJ_T0005583.1 MGP_LPJ_G0004711.1 mouse_genomes_project 9 121936526 121974666 - Gm2415 antisense antisense MGP_LPJ_T0005584.1 MGP_LPJ_G0004711.1 mouse_genomes_project 9 121950165 121974655 - Gm2415 antisense antisense MGP_LPJ_T0005585.1 MGP_LPJ_G0004711.1 mouse_genomes_project 9 121972854 121974852 - Gm2415 antisense antisense MGP_LPJ_T0092585.1 MGP_LPJ_G0034852.1 mouse_genomes_project 9 65399304 65402273 - MGP_LPJ_P0092585 Kbtbd13 protein_coding protein_coding MGP_LPJ_T0018464.1 MGP_LPJ_G0015653.1 mouse_genomes_project 9 39297778 39301192 - Gm16096 processed_transcript processed_transcript MGP_LPJ_T0018465.1 MGP_LPJ_G0015653.1 mouse_genomes_project 9 39297784 39300423 - Gm16096 processed_transcript processed_transcript MGP_LPJ_T0091500.1 MGP_LPJ_G0034460.1 mouse_genomes_project 9 35458995 35522435 - MGP_LPJ_P0091500 Ccdc15 protein_coding protein_coding MGP_LPJ_T0099854.1 MGP_LPJ_G0038117.1 mouse_genomes_project 9 91512573 91512750 + Gm22866 snRNA snRNA MGP_LPJ_T0091476.1 MGP_LPJ_G0034456.1 mouse_genomes_project 9 34982037 35015808 + MGP_LPJ_P0091476 Fez1 protein_coding protein_coding MGP_LPJ_T0091477.1 MGP_LPJ_G0034456.1 mouse_genomes_project 9 34994718 35042899 + MGP_LPJ_P0091477 Fez1 protein_coding protein_coding MGP_LPJ_T0091478.1 MGP_LPJ_G0034456.1 mouse_genomes_project 9 34995652 35027668 + MGP_LPJ_P0091478 Fez1 protein_coding protein_coding MGP_LPJ_T0091479.1 MGP_LPJ_G0034456.1 mouse_genomes_project 9 35007605 35042615 + MGP_LPJ_P0091479 Fez1 protein_coding protein_coding MGP_LPJ_T0091480.1 MGP_LPJ_G0034456.1 mouse_genomes_project 9 35007724 35031641 + MGP_LPJ_P0091480 Fez1 protein_coding nonsense_mediated_decay MGP_LPJ_T0091481.1 MGP_LPJ_G0034456.1 mouse_genomes_project 9 35032738 35034617 + MGP_LPJ_P0091481 Fez1 protein_coding protein_coding MGP_LPJ_T0091482.1 MGP_LPJ_G0034456.1 mouse_genomes_project 9 35033963 35042775 + Fez1 protein_coding retained_intron MGP_LPJ_T0091483.1 MGP_LPJ_G0034456.1 mouse_genomes_project 9 35034363 35042895 + MGP_LPJ_P0091483 Fez1 protein_coding protein_coding MGP_LPJ_T0091928.1 MGP_LPJ_G0034649.1 mouse_genomes_project 9 45257440 45274015 - MGP_LPJ_P0091928 4931429L15Rik protein_coding protein_coding MGP_LPJ_T0091929.1 MGP_LPJ_G0034649.1 mouse_genomes_project 9 45258097 45265642 - MGP_LPJ_P0091929 4931429L15Rik protein_coding protein_coding MGP_LPJ_T0091930.1 MGP_LPJ_G0034649.1 mouse_genomes_project 9 45264353 45270001 - MGP_LPJ_P0091930 4931429L15Rik protein_coding protein_coding MGP_LPJ_T0011107.1 MGP_LPJ_G0009225.1 mouse_genomes_project 9 104066690 104066742 - Mir7243 miRNA miRNA MGP_LPJ_T0094215.1 MGP_LPJ_G0035174.1 mouse_genomes_project 9 110202912 110212047 - MGP_LPJ_P0094215 Apeh protein_coding protein_coding MGP_LPJ_T0094216.1 MGP_LPJ_G0035174.1 mouse_genomes_project 9 110202922 110203537 - Apeh protein_coding retained_intron MGP_LPJ_T0094217.1 MGP_LPJ_G0035174.1 mouse_genomes_project 9 110202922 110211980 - Apeh protein_coding retained_intron MGP_LPJ_T0094218.1 MGP_LPJ_G0035174.1 mouse_genomes_project 9 110203422 110203977 - Apeh protein_coding retained_intron MGP_LPJ_T0094219.1 MGP_LPJ_G0035174.1 mouse_genomes_project 9 110203656 110206029 - Apeh protein_coding retained_intron MGP_LPJ_T0094220.1 MGP_LPJ_G0035174.1 mouse_genomes_project 9 110204284 110211990 - Apeh protein_coding retained_intron MGP_LPJ_T0094221.1 MGP_LPJ_G0035174.1 mouse_genomes_project 9 110209857 110211534 - Apeh protein_coding retained_intron MGP_LPJ_T0094222.1 MGP_LPJ_G0035174.1 mouse_genomes_project 9 110210136 110211993 - MGP_LPJ_P0094222 Apeh protein_coding protein_coding MGP_LPJ_T0095107.1 MGP_LPJ_G0035374.1 mouse_genomes_project 9 127259255 127264513 + MGP_LPJ_P0095107 Cxcr6 protein_coding protein_coding MGP_LPJ_T0094894.1 MGP_LPJ_G0035301.1 mouse_genomes_project 9 122214283 122227171 - MGP_LPJ_P0094894 protein_coding protein_coding MGP_LPJ_T0094895.1 MGP_LPJ_G0035301.1 mouse_genomes_project 9 122216168 122218289 - protein_coding retained_intron MGP_LPJ_T0094675.1 MGP_LPJ_G0035248.1 mouse_genomes_project 9 113310067 113316786 + MGP_LPJ_P0094675 Prss45 protein_coding protein_coding MGP_LPJ_T0094676.1 MGP_LPJ_G0035248.1 mouse_genomes_project 9 113310067 113316783 + MGP_LPJ_P0094676 Prss45 protein_coding protein_coding MGP_LPJ_T0009251.1 MGP_LPJ_G0007435.1 mouse_genomes_project 9 43274082 43275840 + C030014I23Rik lincRNA lincRNA MGP_LPJ_T0009252.1 MGP_LPJ_G0007435.1 mouse_genomes_project 9 43274935 43278287 + C030014I23Rik lincRNA lincRNA MGP_LPJ_T0099862.1 MGP_LPJ_G0038125.1 mouse_genomes_project 9 107980578 107980655 + Gm24631 snRNA snRNA MGP_LPJ_T0091970.1 MGP_LPJ_G0034667.1 mouse_genomes_project 9 48621921 48636312 - MGP_LPJ_P0091970 Ankk1 protein_coding protein_coding MGP_LPJ_T0009286.1 MGP_LPJ_G0007462.1 mouse_genomes_project 9 75083375 75085048 - lincRNA lincRNA MGP_LPJ_T0092715.1 MGP_LPJ_G0034885.1 mouse_genomes_project 9 68869347 68881698 + Rora protein_coding processed_transcript MGP_LPJ_T0092716.1 MGP_LPJ_G0034885.1 mouse_genomes_project 9 68869347 69643360 + MGP_LPJ_P0092716 Rora protein_coding protein_coding MGP_LPJ_T0092717.1 MGP_LPJ_G0034885.1 mouse_genomes_project 9 68869452 69618401 + MGP_LPJ_P0092717 Rora protein_coding nonsense_mediated_decay MGP_LPJ_T0092718.1 MGP_LPJ_G0034885.1 mouse_genomes_project 9 68870864 68880910 + Rora protein_coding processed_transcript MGP_LPJ_T0092719.1 MGP_LPJ_G0034885.1 mouse_genomes_project 9 69445337 69503470 + Rora protein_coding processed_transcript MGP_LPJ_T0092720.1 MGP_LPJ_G0034885.1 mouse_genomes_project 9 69542206 69634928 + MGP_LPJ_P0092720 Rora protein_coding protein_coding MGP_LPJ_T0018508.1 MGP_LPJ_G0015668.1 mouse_genomes_project 9 86824850 86847912 - 9330154J02Rik processed_transcript processed_transcript MGP_LPJ_T0018509.1 MGP_LPJ_G0015668.1 mouse_genomes_project 9 86824850 86848758 - 9330154J02Rik processed_transcript antisense MGP_LPJ_T0018510.1 MGP_LPJ_G0015668.1 mouse_genomes_project 9 86824911 86848950 - 9330154J02Rik processed_transcript antisense MGP_LPJ_T0018511.1 MGP_LPJ_G0015668.1 mouse_genomes_project 9 86826135 86847911 - 9330154J02Rik processed_transcript retained_intron MGP_LPJ_T0093329.1 MGP_LPJ_G0035015.1 mouse_genomes_project 9 91386071 91459649 - MGP_LPJ_P0093329 Tbc1d2b protein_coding protein_coding MGP_LPJ_T0093330.1 MGP_LPJ_G0035015.1 mouse_genomes_project 9 91417565 91459684 - MGP_LPJ_P0093330 Tbc1d2b protein_coding nonsense_mediated_decay MGP_LPJ_T0093331.1 MGP_LPJ_G0035015.1 mouse_genomes_project 9 91426709 91459651 - MGP_LPJ_P0093331 Tbc1d2b protein_coding protein_coding MGP_LPJ_T0093332.1 MGP_LPJ_G0035015.1 mouse_genomes_project 9 91429596 91444392 - Tbc1d2b protein_coding processed_transcript MGP_LPJ_T0094504.1 MGP_LPJ_G0035220.1 mouse_genomes_project 9 111464295 112156842 - protein_coding retained_intron MGP_LPJ_T0011068.1 MGP_LPJ_G0009186.1 mouse_genomes_project 9 18997406 18997539 - Mir1946b miRNA miRNA MGP_LPJ_T0093826.1 MGP_LPJ_G0035115.1 mouse_genomes_project 9 108298845 108369485 + MGP_LPJ_P0093826 Poc1a protein_coding protein_coding MGP_LPJ_T0093827.1 MGP_LPJ_G0035115.1 mouse_genomes_project 9 108299164 108369498 + MGP_LPJ_P0093827 Poc1a protein_coding protein_coding MGP_LPJ_T0093828.1 MGP_LPJ_G0035115.1 mouse_genomes_project 9 108308635 108370219 + Poc1a protein_coding processed_transcript MGP_LPJ_T0093829.1 MGP_LPJ_G0035115.1 mouse_genomes_project 9 108318528 108369483 + Poc1a protein_coding processed_transcript MGP_LPJ_T0093830.1 MGP_LPJ_G0035115.1 mouse_genomes_project 9 108345216 108369484 + Poc1a protein_coding processed_transcript MGP_LPJ_T0092276.1 MGP_LPJ_G0034768.1 mouse_genomes_project 9 57113480 57119757 - MGP_LPJ_P0092276 Cplx3 protein_coding protein_coding MGP_LPJ_T0092672.1 MGP_LPJ_G0034874.1 mouse_genomes_project 9 66820806 66892820 + MGP_LPJ_P0092672 Car12 protein_coding protein_coding MGP_LPJ_T0092673.1 MGP_LPJ_G0034874.1 mouse_genomes_project 9 66820847 66880449 + Car12 protein_coding retained_intron MGP_LPJ_T0092674.1 MGP_LPJ_G0034874.1 mouse_genomes_project 9 66820848 66873900 + Car12 protein_coding retained_intron MGP_LPJ_T0092675.1 MGP_LPJ_G0034874.1 mouse_genomes_project 9 66820850 66892817 + MGP_LPJ_P0092675 Car12 protein_coding protein_coding MGP_LPJ_T0092676.1 MGP_LPJ_G0034874.1 mouse_genomes_project 9 66873731 66890292 + MGP_LPJ_P0092676 Car12 protein_coding protein_coding MGP_LPJ_T0016000.1 MGP_LPJ_G0014091.1 mouse_genomes_project 9 49421661 49422664 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011092.1 MGP_LPJ_G0009210.1 mouse_genomes_project 9 64691692 64691799 - miRNA miRNA MGP_LPJ_T0093856.1 MGP_LPJ_G0035120.1 mouse_genomes_project 9 108483118 108492007 + MGP_LPJ_P0093856 protein_coding protein_coding MGP_LPJ_T0093857.1 MGP_LPJ_G0035120.1 mouse_genomes_project 9 108483234 108490991 + protein_coding processed_transcript MGP_LPJ_T0093858.1 MGP_LPJ_G0035120.1 mouse_genomes_project 9 108483280 108495569 + MGP_LPJ_P0093858 protein_coding unknown_likely_coding MGP_LPJ_T0093859.1 MGP_LPJ_G0035120.1 mouse_genomes_project 9 108484734 108485752 + protein_coding processed_transcript MGP_LPJ_T0093860.1 MGP_LPJ_G0035120.1 mouse_genomes_project 9 108484809 108491433 + protein_coding retained_intron MGP_LPJ_T0093861.1 MGP_LPJ_G0035120.1 mouse_genomes_project 9 108484822 108492686 + MGP_LPJ_P0093861 protein_coding protein_coding MGP_LPJ_T0093862.1 MGP_LPJ_G0035120.1 mouse_genomes_project 9 108486598 108487354 + protein_coding processed_transcript MGP_LPJ_T0093863.1 MGP_LPJ_G0035120.1 mouse_genomes_project 9 108487011 108491991 + MGP_LPJ_P0093863 protein_coding protein_coding MGP_LPJ_T0093864.1 MGP_LPJ_G0035120.1 mouse_genomes_project 9 108491310 108491781 + protein_coding retained_intron MGP_LPJ_T0093865.1 MGP_LPJ_G0035120.1 mouse_genomes_project 9 108491572 108492249 + MGP_LPJ_P0093865 protein_coding protein_coding MGP_LPJ_T0093866.1 MGP_LPJ_G0035120.1 mouse_genomes_project 9 108491968 108495103 + MGP_LPJ_P0093866 protein_coding nonsense_mediated_decay MGP_LPJ_T0093867.1 MGP_LPJ_G0035120.1 mouse_genomes_project 9 108492184 108492923 + protein_coding retained_intron MGP_LPJ_T0093868.1 MGP_LPJ_G0035120.1 mouse_genomes_project 9 108492209 108493707 + MGP_LPJ_P0093868 protein_coding protein_coding MGP_LPJ_T0093869.1 MGP_LPJ_G0035120.1 mouse_genomes_project 9 108492504 108493173 + protein_coding processed_transcript MGP_LPJ_T0093870.1 MGP_LPJ_G0035120.1 mouse_genomes_project 9 108492631 108495249 + MGP_LPJ_P0093870 protein_coding protein_coding MGP_LPJ_T0093871.1 MGP_LPJ_G0035120.1 mouse_genomes_project 9 108492814 108493433 + protein_coding retained_intron MGP_LPJ_T0101128.1 MGP_LPJ_G0039391.1 mouse_genomes_project 9 101376701 101376828 - Gm23949 snoRNA snoRNA MGP_LPJ_T0092589.1 MGP_LPJ_G0034855.1 mouse_genomes_project 9 65448228 65465301 + MGP_LPJ_P0092589 Mtfmt protein_coding protein_coding MGP_LPJ_T0092590.1 MGP_LPJ_G0034855.1 mouse_genomes_project 9 65448234 65464660 + Mtfmt protein_coding retained_intron MGP_LPJ_T0092591.1 MGP_LPJ_G0034855.1 mouse_genomes_project 9 65449453 65459511 + Mtfmt protein_coding processed_transcript MGP_LPJ_T0092592.1 MGP_LPJ_G0034855.1 mouse_genomes_project 9 65455789 65464368 + Mtfmt protein_coding retained_intron MGP_LPJ_T0092482.1 MGP_LPJ_G0034819.1 mouse_genomes_project 9 62644698 62665994 - MGP_LPJ_P0092482 Fem1b protein_coding protein_coding MGP_LPJ_T0093702.1 MGP_LPJ_G0035094.1 mouse_genomes_project 9 105917562 105919510 + Acad11 protein_coding retained_intron MGP_LPJ_T0093703.1 MGP_LPJ_G0035094.1 mouse_genomes_project 9 105917601 105986433 + MGP_LPJ_P0093703 Acad11 protein_coding protein_coding MGP_LPJ_T0093705.1 MGP_LPJ_G0035094.1 mouse_genomes_project 9 105946410 105970865 + Acad11 protein_coding processed_transcript MGP_LPJ_T0093706.1 MGP_LPJ_G0035094.1 mouse_genomes_project 9 105952918 105965389 + MGP_LPJ_P0093706 Acad11 protein_coding protein_coding MGP_LPJ_T0093709.1 MGP_LPJ_G0035094.1 mouse_genomes_project 9 105967746 105971203 + Acad11 protein_coding retained_intron MGP_LPJ_T0093710.1 MGP_LPJ_G0035094.1 mouse_genomes_project 9 105982743 105985925 + Acad11 protein_coding processed_transcript MGP_LPJ_T0091770.1 MGP_LPJ_G0034603.1 mouse_genomes_project 9 43197295 43200206 + MGP_LPJ_P0091770 Rps25 protein_coding protein_coding MGP_LPJ_T0094938.1 MGP_LPJ_G0035318.1 mouse_genomes_project 9 123162015 123171859 - MGP_LPJ_P0094938 Xirp1 protein_coding protein_coding MGP_LPJ_T0016109.1 MGP_LPJ_G0014200.1 mouse_genomes_project 9 106036250 106036863 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005457.1 MGP_LPJ_G0004624.1 mouse_genomes_project 9 41098850 41134416 + Gm16322 antisense antisense MGP_LPJ_T0005458.1 MGP_LPJ_G0004624.1 mouse_genomes_project 9 41099869 41131171 + Gm16322 antisense antisense MGP_LPJ_T0005451.1 MGP_LPJ_G0004618.1 mouse_genomes_project 9 30694313 30695834 - Gm27240 antisense antisense MGP_LPJ_T0093553.1 MGP_LPJ_G0035064.1 mouse_genomes_project 9 101319368 101342833 - MGP_LPJ_P0093553 Cldn18 protein_coding protein_coding MGP_LPJ_T0093554.1 MGP_LPJ_G0035064.1 mouse_genomes_project 9 101321718 101350013 - MGP_LPJ_P0093554 Cldn18 protein_coding protein_coding MGP_LPJ_T0093555.1 MGP_LPJ_G0035064.1 mouse_genomes_project 9 101322080 101342779 - MGP_LPJ_P0093555 Cldn18 protein_coding protein_coding MGP_LPJ_T0093556.1 MGP_LPJ_G0035064.1 mouse_genomes_project 9 101322620 101350013 - MGP_LPJ_P0093556 Cldn18 protein_coding protein_coding MGP_LPJ_T0092483.1 MGP_LPJ_G0034820.1 mouse_genomes_project 9 62695777 62709915 + MGP_LPJ_P0092483 Cln6 protein_coding protein_coding MGP_LPJ_T0092484.1 MGP_LPJ_G0034820.1 mouse_genomes_project 9 62695784 62703927 + MGP_LPJ_P0092484 Cln6 protein_coding nonsense_mediated_decay MGP_LPJ_T0092485.1 MGP_LPJ_G0034820.1 mouse_genomes_project 9 62703923 62708620 + MGP_LPJ_P0092485 Cln6 protein_coding nonsense_mediated_decay MGP_LPJ_T0092486.1 MGP_LPJ_G0034820.1 mouse_genomes_project 9 62704941 62709071 + MGP_LPJ_P0092486 Cln6 protein_coding protein_coding MGP_LPJ_T0011118.1 MGP_LPJ_G0009236.1 mouse_genomes_project 9 111024156 111024242 + Gm23156 miRNA miRNA MGP_LPJ_T0094871.1 MGP_LPJ_G0035297.1 mouse_genomes_project 9 121974849 122104661 + MGP_LPJ_P0094871 Ctdspl protein_coding protein_coding MGP_LPJ_T0094872.1 MGP_LPJ_G0035297.1 mouse_genomes_project 9 121975982 122101319 + MGP_LPJ_P0094872 Ctdspl protein_coding protein_coding MGP_LPJ_T0094873.1 MGP_LPJ_G0035297.1 mouse_genomes_project 9 121978985 122092286 + Ctdspl protein_coding processed_transcript MGP_LPJ_T0094874.1 MGP_LPJ_G0035297.1 mouse_genomes_project 9 122091658 122101579 + Ctdspl protein_coding retained_intron MGP_LPJ_T0002372.1 MGP_LPJ_G0002279.1 mouse_genomes_project 9 22288259 22290113 - TEC TEC MGP_LPJ_T0095015.1 MGP_LPJ_G0035338.1 mouse_genomes_project 9 125058540 125070250 + MGP_LPJ_P0095015 Zfp651 protein_coding protein_coding MGP_LPJ_T0090851.1 MGP_LPJ_G0034222.1 mouse_genomes_project 9 4416440 4426275 + MGP_LPJ_P0090851 Mmp10 protein_coding protein_coding MGP_LPJ_T0009266.1 MGP_LPJ_G0007447.1 mouse_genomes_project 9 58028256 58042614 + 4930461G14Rik lincRNA lincRNA MGP_LPJ_T0009370.1 MGP_LPJ_G0007528.1 mouse_genomes_project 9 125910660 126014770 + 9530059O14Rik lincRNA lincRNA MGP_LPJ_T0009371.1 MGP_LPJ_G0007528.1 mouse_genomes_project 9 125910664 125920860 + 9530059O14Rik lincRNA lincRNA MGP_LPJ_T0009372.1 MGP_LPJ_G0007528.1 mouse_genomes_project 9 125910665 126015401 + 9530059O14Rik lincRNA lincRNA MGP_LPJ_T0093217.1 MGP_LPJ_G0034991.1 mouse_genomes_project 9 87625232 87753293 - MGP_LPJ_P0093217 Me1 protein_coding protein_coding MGP_LPJ_T0093218.1 MGP_LPJ_G0034991.1 mouse_genomes_project 9 87625267 87744772 - MGP_LPJ_P0093218 Me1 protein_coding protein_coding MGP_LPJ_T0093219.1 MGP_LPJ_G0034991.1 mouse_genomes_project 9 87628033 87669153 - Me1 protein_coding processed_transcript MGP_LPJ_T0093220.1 MGP_LPJ_G0034991.1 mouse_genomes_project 9 87663967 87669186 - Me1 protein_coding processed_transcript MGP_LPJ_T0002427.1 MGP_LPJ_G0002333.1 mouse_genomes_project 9 88270982 88272058 - TEC TEC MGP_LPJ_T0091452.1 MGP_LPJ_G0034453.1 mouse_genomes_project 9 34862184 34882022 - MGP_LPJ_P0091452 Chek1 protein_coding protein_coding MGP_LPJ_T0091453.1 MGP_LPJ_G0034453.1 mouse_genomes_project 9 34862184 34882306 - MGP_LPJ_P0091453 Chek1 protein_coding protein_coding MGP_LPJ_T0091454.1 MGP_LPJ_G0034453.1 mouse_genomes_project 9 34863118 34882233 - MGP_LPJ_P0091454 Chek1 protein_coding nonsense_mediated_decay MGP_LPJ_T0091455.1 MGP_LPJ_G0034453.1 mouse_genomes_project 9 34863836 34881516 - MGP_LPJ_P0091455 Chek1 protein_coding protein_coding MGP_LPJ_T0091456.1 MGP_LPJ_G0034453.1 mouse_genomes_project 9 34863836 34881516 - MGP_LPJ_P0091456 Chek1 protein_coding protein_coding MGP_LPJ_T0091457.1 MGP_LPJ_G0034453.1 mouse_genomes_project 9 34868370 34878546 - Chek1 protein_coding retained_intron MGP_LPJ_T0091458.1 MGP_LPJ_G0034453.1 mouse_genomes_project 9 34878449 34882712 - Chek1 protein_coding processed_transcript MGP_LPJ_T0091459.1 MGP_LPJ_G0034453.1 mouse_genomes_project 9 34879411 34882218 - Chek1 protein_coding retained_intron MGP_LPJ_T0091460.1 MGP_LPJ_G0034453.1 mouse_genomes_project 9 34879670 34882099 - MGP_LPJ_P0091460 Chek1 protein_coding protein_coding MGP_LPJ_T0009362.1 MGP_LPJ_G0007520.1 mouse_genomes_project 9 120881824 120889883 + Gm26614 lincRNA lincRNA MGP_LPJ_T0011767.1 MGP_LPJ_G0009885.1 mouse_genomes_project 9 126153813 126154081 + Gm25341 misc_RNA misc_RNA MGP_LPJ_T0005517.1 MGP_LPJ_G0004663.1 mouse_genomes_project 9 96892312 96895270 + antisense antisense MGP_LPJ_T0092584.1 MGP_LPJ_G0034851.1 mouse_genomes_project 9 65361521 65386750 + MGP_LPJ_P0092584 Ubap1l protein_coding protein_coding MGP_LPJ_T0092430.1 MGP_LPJ_G0034807.1 mouse_genomes_project 9 60443152 60462030 + MGP_LPJ_P0092430 Larp6 protein_coding protein_coding MGP_LPJ_T0016079.1 MGP_LPJ_G0014170.1 mouse_genomes_project 9 96779843 96783486 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091199.1 MGP_LPJ_G0034363.1 mouse_genomes_project 9 19316463 19327170 - MGP_LPJ_P0091199 Rab3d protein_coding protein_coding MGP_LPJ_T0091200.1 MGP_LPJ_G0034363.1 mouse_genomes_project 9 19316482 19327117 - MGP_LPJ_P0091200 Rab3d protein_coding protein_coding MGP_LPJ_T0091201.1 MGP_LPJ_G0034363.1 mouse_genomes_project 9 19317616 19327095 - MGP_LPJ_P0091201 Rab3d protein_coding protein_coding MGP_LPJ_T0091202.1 MGP_LPJ_G0034363.1 mouse_genomes_project 9 19323863 19327067 - MGP_LPJ_P0091202 Rab3d protein_coding protein_coding MGP_LPJ_T0091203.1 MGP_LPJ_G0034363.1 mouse_genomes_project 9 19324586 19327099 - Rab3d protein_coding retained_intron MGP_LPJ_T0098718.1 MGP_LPJ_G0036981.1 mouse_genomes_project 9 127225856 127243615 - Gm17021 sense_overlapping sense_overlapping MGP_LPJ_T0092607.1 MGP_LPJ_G0034861.1 mouse_genomes_project 9 65690877 65713454 + Oaz2 protein_coding processed_transcript MGP_LPJ_T0092608.1 MGP_LPJ_G0034861.1 mouse_genomes_project 9 65692545 65712397 + Oaz2 protein_coding processed_transcript MGP_LPJ_T0092609.1 MGP_LPJ_G0034861.1 mouse_genomes_project 9 65700891 65714872 + MGP_LPJ_P0092609 Oaz2 protein_coding protein_coding MGP_LPJ_T0092610.1 MGP_LPJ_G0034861.1 mouse_genomes_project 9 65700922 65713119 + Oaz2 protein_coding retained_intron MGP_LPJ_T0094493.1 MGP_LPJ_G0035216.1 mouse_genomes_project 9 111290515 111318036 - MGP_LPJ_P0094493 Fbxw21 protein_coding protein_coding MGP_LPJ_T0094494.1 MGP_LPJ_G0035216.1 mouse_genomes_project 9 111293429 111318016 - MGP_LPJ_P0094494 Fbxw21 protein_coding protein_coding MGP_LPJ_T0094495.1 MGP_LPJ_G0035216.1 mouse_genomes_project 9 111294344 111303851 - Fbxw21 protein_coding processed_transcript MGP_LPJ_T0094496.1 MGP_LPJ_G0035216.1 mouse_genomes_project 9 111303901 111318015 - MGP_LPJ_P0094496 Fbxw21 protein_coding protein_coding MGP_LPJ_T0092540.1 MGP_LPJ_G0034837.1 mouse_genomes_project 9 64253933 64288939 - MGP_LPJ_P0092540 Dis3l protein_coding protein_coding MGP_LPJ_T0092541.1 MGP_LPJ_G0034837.1 mouse_genomes_project 9 64253943 64288961 - MGP_LPJ_P0092541 Dis3l protein_coding protein_coding MGP_LPJ_T0092542.1 MGP_LPJ_G0034837.1 mouse_genomes_project 9 64253943 64288265 - MGP_LPJ_P0092542 Dis3l protein_coding protein_coding MGP_LPJ_T0092543.1 MGP_LPJ_G0034837.1 mouse_genomes_project 9 64270747 64288964 - Dis3l protein_coding retained_intron MGP_LPJ_T0092544.1 MGP_LPJ_G0034837.1 mouse_genomes_project 9 64277333 64284406 - MGP_LPJ_P0092544 Dis3l protein_coding protein_coding MGP_LPJ_T0092545.1 MGP_LPJ_G0034837.1 mouse_genomes_project 9 64284441 64288571 - Dis3l protein_coding processed_transcript MGP_LPJ_T0092546.1 MGP_LPJ_G0034837.1 mouse_genomes_project 9 64287264 64289065 - Dis3l protein_coding retained_intron MGP_LPJ_T0009337.1 MGP_LPJ_G0007503.1 mouse_genomes_project 9 104558248 104558508 - Gm28621 lincRNA lincRNA MGP_LPJ_T0091618.1 MGP_LPJ_G0034548.1 mouse_genomes_project 9 38403504 38404437 - MGP_LPJ_P0091618 Olfr975 protein_coding protein_coding MGP_LPJ_T0090842.1 MGP_LPJ_G0034219.1 mouse_genomes_project 9 4258796 4264209 + MGP_LPJ_P0090842 Mmp12 protein_coding protein_coding MGP_LPJ_T0090843.1 MGP_LPJ_G0034219.1 mouse_genomes_project 9 4261793 4285514 + MGP_LPJ_P0090843 Mmp12 protein_coding protein_coding MGP_LPJ_T0090844.1 MGP_LPJ_G0034219.1 mouse_genomes_project 9 4261793 4276541 + MGP_LPJ_P0090844 Mmp12 protein_coding protein_coding MGP_LPJ_T0090845.1 MGP_LPJ_G0034219.1 mouse_genomes_project 9 4261825 4273741 + Mmp12 protein_coding retained_intron MGP_LPJ_T0090846.1 MGP_LPJ_G0034219.1 mouse_genomes_project 9 4261825 4262753 + Mmp12 protein_coding processed_transcript MGP_LPJ_T0090847.1 MGP_LPJ_G0034219.1 mouse_genomes_project 9 4261825 4274968 + MGP_LPJ_P0090847 Mmp12 protein_coding nonsense_mediated_decay MGP_LPJ_T0090848.1 MGP_LPJ_G0034219.1 mouse_genomes_project 9 4261934 4274405 + MGP_LPJ_P0090848 Mmp12 protein_coding protein_coding MGP_LPJ_T0091932.1 MGP_LPJ_G0034651.1 mouse_genomes_project 9 46617508 46955908 + MGP_LPJ_P0091932 Cadm1 protein_coding protein_coding MGP_LPJ_T0091933.1 MGP_LPJ_G0034651.1 mouse_genomes_project 9 46617546 46953114 + MGP_LPJ_P0091933 Cadm1 protein_coding protein_coding MGP_LPJ_T0091934.1 MGP_LPJ_G0034651.1 mouse_genomes_project 9 46617579 46960164 + MGP_LPJ_P0091934 Cadm1 protein_coding protein_coding MGP_LPJ_T0091935.1 MGP_LPJ_G0034651.1 mouse_genomes_project 9 46617592 46953556 + MGP_LPJ_P0091935 Cadm1 protein_coding protein_coding MGP_LPJ_T0091936.1 MGP_LPJ_G0034651.1 mouse_genomes_project 9 46617592 46955903 + MGP_LPJ_P0091936 Cadm1 protein_coding protein_coding MGP_LPJ_T0091937.1 MGP_LPJ_G0034651.1 mouse_genomes_project 9 46617687 46917978 + Cadm1 protein_coding retained_intron MGP_LPJ_T0091938.1 MGP_LPJ_G0034651.1 mouse_genomes_project 9 46617687 46888337 + Cadm1 protein_coding retained_intron MGP_LPJ_T0091939.1 MGP_LPJ_G0034651.1 mouse_genomes_project 9 46617708 46912940 + Cadm1 protein_coding processed_transcript MGP_LPJ_T0091940.1 MGP_LPJ_G0034651.1 mouse_genomes_project 9 46617708 46952917 + MGP_LPJ_P0091940 Cadm1 protein_coding protein_coding MGP_LPJ_T0011749.1 MGP_LPJ_G0009867.1 mouse_genomes_project 9 41152129 41152188 - Gm24420 misc_RNA misc_RNA MGP_LPJ_T0093682.1 MGP_LPJ_G0035089.1 mouse_genomes_project 9 105257204 105314396 - MGP_LPJ_P0093682 Bfsp2 protein_coding protein_coding MGP_LPJ_T0093683.1 MGP_LPJ_G0035089.1 mouse_genomes_project 9 105257208 105283850 - Bfsp2 protein_coding processed_transcript MGP_LPJ_T0092973.1 MGP_LPJ_G0034935.1 mouse_genomes_project 9 76003117 76030155 + MGP_LPJ_P0092973 Leo1 protein_coding protein_coding MGP_LPJ_T0092098.1 MGP_LPJ_G0034707.1 mouse_genomes_project 9 52867101 52905451 + MGP_LPJ_P0092098 Npat protein_coding protein_coding MGP_LPJ_T0092099.1 MGP_LPJ_G0034707.1 mouse_genomes_project 9 52894566 52898243 + Npat protein_coding retained_intron MGP_LPJ_T0005506.1 MGP_LPJ_G0004656.1 mouse_genomes_project 9 80476503 80478635 + 4930562D21Rik antisense antisense MGP_LPJ_T0092640.1 MGP_LPJ_G0034867.1 mouse_genomes_project 9 66117195 66121751 - MGP_LPJ_P0092640 Snx22 protein_coding protein_coding MGP_LPJ_T0093393.1 MGP_LPJ_G0035031.1 mouse_genomes_project 9 97154083 97252937 - MGP_LPJ_P0093393 Pls1 protein_coding protein_coding MGP_LPJ_T0093394.1 MGP_LPJ_G0035031.1 mouse_genomes_project 9 97186397 97221505 - MGP_LPJ_P0093394 Pls1 protein_coding protein_coding MGP_LPJ_T0093395.1 MGP_LPJ_G0035031.1 mouse_genomes_project 9 97187770 97252962 - Pls1 protein_coding processed_transcript MGP_LPJ_T0011752.1 MGP_LPJ_G0009870.1 mouse_genomes_project 9 61822406 61822499 + Gm23221 misc_RNA misc_RNA MGP_LPJ_T0094338.1 MGP_LPJ_G0035192.1 mouse_genomes_project 9 110721736 110727500 + MGP_LPJ_P0094338 Impdh2 protein_coding protein_coding MGP_LPJ_T0094339.1 MGP_LPJ_G0035192.1 mouse_genomes_project 9 110721889 110725252 + MGP_LPJ_P0094339 Impdh2 protein_coding protein_coding MGP_LPJ_T0094340.1 MGP_LPJ_G0035192.1 mouse_genomes_project 9 110721920 110723614 + Impdh2 protein_coding retained_intron MGP_LPJ_T0094341.1 MGP_LPJ_G0035192.1 mouse_genomes_project 9 110721930 110724288 + Impdh2 protein_coding retained_intron MGP_LPJ_T0094342.1 MGP_LPJ_G0035192.1 mouse_genomes_project 9 110725050 110727310 + MGP_LPJ_P0094342 Impdh2 protein_coding protein_coding MGP_LPJ_T0094343.1 MGP_LPJ_G0035192.1 mouse_genomes_project 9 110725184 110726086 + Impdh2 protein_coding retained_intron MGP_LPJ_T0094344.1 MGP_LPJ_G0035192.1 mouse_genomes_project 9 110727115 110727485 + Impdh2 protein_coding retained_intron MGP_LPJ_T0094345.1 MGP_LPJ_G0035192.1 mouse_genomes_project 9 110727119 110727480 + Impdh2 protein_coding retained_intron MGP_LPJ_T0098688.1 MGP_LPJ_G0036956.1 mouse_genomes_project 9 89515048 89517201 - Gm28229 sense_intronic sense_intronic MGP_LPJ_T0002420.1 MGP_LPJ_G0002327.1 mouse_genomes_project 9 86316865 86318706 - TEC TEC MGP_LPJ_T0092268.1 MGP_LPJ_G0034764.1 mouse_genomes_project 9 57049281 57054853 + MGP_LPJ_P0092268 Fam219b protein_coding protein_coding MGP_LPJ_T0091552.1 MGP_LPJ_G0034494.1 mouse_genomes_project 9 36638967 36641077 + MGP_LPJ_P0091552 Olfr147 protein_coding protein_coding MGP_LPJ_T0101109.1 MGP_LPJ_G0039372.1 mouse_genomes_project 9 64856827 64856969 - Gm24347 snoRNA snoRNA MGP_LPJ_T0099827.1 MGP_LPJ_G0038090.1 mouse_genomes_project 9 54965312 54965403 - Gm23407 snRNA snRNA MGP_LPJ_T0091574.1 MGP_LPJ_G0034510.1 mouse_genomes_project 9 37034484 37037763 + MGP_LPJ_P0091574 Olfr921 protein_coding protein_coding MGP_LPJ_T0009361.1 MGP_LPJ_G0007519.1 mouse_genomes_project 9 116917201 117123778 - lincRNA lincRNA MGP_LPJ_T0091535.1 MGP_LPJ_G0034478.1 mouse_genomes_project 9 36207401 36208349 + MGP_LPJ_P0091535 Olfr881 protein_coding protein_coding MGP_LPJ_T0002464.1 MGP_LPJ_G0002370.1 mouse_genomes_project 9 103802008 103807479 - TEC TEC MGP_LPJ_T0094940.1 MGP_LPJ_G0035320.1 mouse_genomes_project 9 123244173 123246951 + MGP_LPJ_P0094940 Ccr8 protein_coding protein_coding MGP_LPJ_T0009268.1 MGP_LPJ_G0007449.1 mouse_genomes_project 9 60466338 60494390 + 1700036A12Rik lincRNA lincRNA MGP_LPJ_T0009269.1 MGP_LPJ_G0007449.1 mouse_genomes_project 9 60493716 60494070 + 1700036A12Rik lincRNA lincRNA MGP_LPJ_T0005578.1 MGP_LPJ_G0004707.1 mouse_genomes_project 9 117580321 117582480 + Gm9888 antisense antisense MGP_LPJ_T0002395.1 MGP_LPJ_G0002302.1 mouse_genomes_project 9 72670431 72672432 + TEC TEC MGP_LPJ_T0092572.1 MGP_LPJ_G0034845.1 mouse_genomes_project 9 65079860 65120178 + MGP_LPJ_P0092572 Igdcc4 protein_coding protein_coding MGP_LPJ_T0092573.1 MGP_LPJ_G0034845.1 mouse_genomes_project 9 65079909 65117818 + MGP_LPJ_P0092573 Igdcc4 protein_coding protein_coding MGP_LPJ_T0011748.1 MGP_LPJ_G0009866.1 mouse_genomes_project 9 19068677 19068861 + Gm27373 misc_RNA misc_RNA MGP_LPJ_T0091434.1 MGP_LPJ_G0034440.1 mouse_genomes_project 9 33747125 33749419 - MGP_LPJ_P0091434 Pate1 protein_coding protein_coding MGP_LPJ_T0091435.1 MGP_LPJ_G0034440.1 mouse_genomes_project 9 33747474 33749438 - Pate1 protein_coding retained_intron MGP_LPJ_T0015978.1 MGP_LPJ_G0014069.1 mouse_genomes_project 9 20186756 20187551 - processed_pseudogene processed_pseudogene MGP_LPJ_T0092020.1 MGP_LPJ_G0034682.1 mouse_genomes_project 9 49997121 50003926 - MGP_LPJ_P0092020 2310030G06Rik protein_coding protein_coding MGP_LPJ_T0092731.1 MGP_LPJ_G0034887.1 mouse_genomes_project 9 69710847 69748955 + MGP_LPJ_P0092731 Anxa2 protein_coding protein_coding MGP_LPJ_T0092732.1 MGP_LPJ_G0034887.1 mouse_genomes_project 9 69710943 69742393 + MGP_LPJ_P0092732 Anxa2 protein_coding protein_coding MGP_LPJ_T0092733.1 MGP_LPJ_G0034887.1 mouse_genomes_project 9 69711293 69740995 + MGP_LPJ_P0092733 Anxa2 protein_coding protein_coding MGP_LPJ_T0092734.1 MGP_LPJ_G0034887.1 mouse_genomes_project 9 69735647 69748955 + Anxa2 protein_coding retained_intron MGP_LPJ_T0092735.1 MGP_LPJ_G0034887.1 mouse_genomes_project 9 69737293 69748673 + MGP_LPJ_P0092735 Anxa2 protein_coding protein_coding MGP_LPJ_T0092736.1 MGP_LPJ_G0034887.1 mouse_genomes_project 9 69743918 69745244 + Anxa2 protein_coding retained_intron MGP_LPJ_T0090840.1 MGP_LPJ_G0034217.1 mouse_genomes_project 9 4093136 4113531 + MGP_LPJ_P0090840 Dcun1d5 protein_coding protein_coding MGP_LPJ_T0091231.1 MGP_LPJ_G0034378.1 mouse_genomes_project 9 19615307 19616812 + MGP_LPJ_P0091231 Pigyl protein_coding protein_coding MGP_LPJ_T0091232.1 MGP_LPJ_G0034378.1 mouse_genomes_project 9 19615407 19616779 + MGP_LPJ_P0091232 Pigyl protein_coding protein_coding MGP_LPJ_T0091947.1 MGP_LPJ_G0034654.1 mouse_genomes_project 9 47549735 47561592 + MGP_LPJ_P0091947 unknown_likely_coding unknown_likely_coding MGP_LPJ_T0011087.1 MGP_LPJ_G0009205.1 mouse_genomes_project 9 54080231 54080298 + Mir5710 miRNA miRNA MGP_LPJ_T0091506.1 MGP_LPJ_G0034463.1 mouse_genomes_project 9 35592282 35595458 - Robo3 protein_coding retained_intron MGP_LPJ_T0091507.1 MGP_LPJ_G0034463.1 mouse_genomes_project 9 35592658 35599195 - Robo3 protein_coding retained_intron MGP_LPJ_T0091508.1 MGP_LPJ_G0034463.1 mouse_genomes_project 9 35592658 35609789 - MGP_LPJ_P0091508 Robo3 protein_coding protein_coding MGP_LPJ_T0091509.1 MGP_LPJ_G0034463.1 mouse_genomes_project 9 35592658 35606754 - MGP_LPJ_P0091509 Robo3 protein_coding protein_coding MGP_LPJ_T0091510.1 MGP_LPJ_G0034463.1 mouse_genomes_project 9 35592775 35606754 - Robo3 protein_coding retained_intron MGP_LPJ_T0091511.1 MGP_LPJ_G0034463.1 mouse_genomes_project 9 35594019 35595385 - Robo3 protein_coding retained_intron MGP_LPJ_T0094832.1 MGP_LPJ_G0035287.1 mouse_genomes_project 9 118063025 118140677 - MGP_LPJ_P0094832 Stt3b protein_coding protein_coding MGP_LPJ_T0094742.1 MGP_LPJ_G0035262.1 mouse_genomes_project 9 113818571 113906361 + MGP_LPJ_P0094742 Trank1 protein_coding protein_coding MGP_LPJ_T0094743.1 MGP_LPJ_G0035262.1 mouse_genomes_project 9 113818772 113867709 + Trank1 protein_coding processed_transcript MGP_LPJ_T0094744.1 MGP_LPJ_G0035262.1 mouse_genomes_project 9 113818928 113854943 + MGP_LPJ_P0094744 Trank1 protein_coding protein_coding MGP_LPJ_T0094745.1 MGP_LPJ_G0035262.1 mouse_genomes_project 9 113819061 113896077 + MGP_LPJ_P0094745 Trank1 protein_coding unknown_likely_coding MGP_LPJ_T0094746.1 MGP_LPJ_G0035262.1 mouse_genomes_project 9 113885589 113906361 + Trank1 protein_coding processed_transcript MGP_LPJ_T0094747.1 MGP_LPJ_G0035262.1 mouse_genomes_project 9 113885652 113899807 + Trank1 protein_coding processed_transcript MGP_LPJ_T0094748.1 MGP_LPJ_G0035262.1 mouse_genomes_project 9 113885657 113895917 + Trank1 protein_coding processed_transcript MGP_LPJ_T0094749.1 MGP_LPJ_G0035262.1 mouse_genomes_project 9 113896917 113900725 + Trank1 protein_coding retained_intron MGP_LPJ_T0092712.1 MGP_LPJ_G0034883.1 mouse_genomes_project 9 68017318 68019117 - MGP_LPJ_P0092712 C2cd4a protein_coding protein_coding MGP_LPJ_T0016036.1 MGP_LPJ_G0014127.1 mouse_genomes_project 9 77744494 77746696 + processed_pseudogene processed_pseudogene MGP_LPJ_T0091860.1 MGP_LPJ_G0034631.1 mouse_genomes_project 9 44181554 44210211 + MGP_LPJ_P0091860 Tmprss13 protein_coding protein_coding MGP_LPJ_T0094885.1 MGP_LPJ_G0035299.1 mouse_genomes_project 9 122134737 122158199 - MGP_LPJ_P0094885 Plcd1 protein_coding protein_coding MGP_LPJ_T0016023.1 MGP_LPJ_G0014114.1 mouse_genomes_project 9 73611025 73611338 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091226.1 MGP_LPJ_G0034376.1 mouse_genomes_project 9 19563118 19564298 - MGP_LPJ_P0091226 Elof1 protein_coding protein_coding MGP_LPJ_T0091227.1 MGP_LPJ_G0034376.1 mouse_genomes_project 9 19563119 19567272 - MGP_LPJ_P0091227 Elof1 protein_coding protein_coding MGP_LPJ_T0005474.1 MGP_LPJ_G0004634.1 mouse_genomes_project 9 54949113 54950112 - Gm17226 antisense antisense MGP_LPJ_T0005475.1 MGP_LPJ_G0004634.1 mouse_genomes_project 9 54949124 54950453 - Gm17226 antisense antisense MGP_LPJ_T0011108.1 MGP_LPJ_G0009226.1 mouse_genomes_project 9 106304185 106304260 + Mir2136 miRNA miRNA MGP_LPJ_T0016128.1 MGP_LPJ_G0014219.1 mouse_genomes_project 9 126675243 126677327 - processed_pseudogene processed_pseudogene MGP_LPJ_T0094679.1 MGP_LPJ_G0035250.1 mouse_genomes_project 9 113336967 113343971 + MGP_LPJ_P0094679 Prss50 protein_coding protein_coding MGP_LPJ_T0094680.1 MGP_LPJ_G0035250.1 mouse_genomes_project 9 113340701 113343970 + MGP_LPJ_P0094680 Prss50 protein_coding protein_coding MGP_LPJ_T0092216.1 MGP_LPJ_G0034746.1 mouse_genomes_project 9 55845093 55925367 + MGP_LPJ_P0092216 Hmg20a protein_coding unknown_likely_coding MGP_LPJ_T0005560.1 MGP_LPJ_G0004692.1 mouse_genomes_project 9 109640427 109650034 - Gm9917 antisense antisense MGP_LPJ_T0005561.1 MGP_LPJ_G0004692.1 mouse_genomes_project 9 109644455 109650037 - Gm9917 antisense antisense MGP_LPJ_T0005562.1 MGP_LPJ_G0004692.1 mouse_genomes_project 9 109645361 109648546 - Gm9917 antisense antisense MGP_LPJ_T0005563.1 MGP_LPJ_G0004692.1 mouse_genomes_project 9 109645965 109648402 - Gm9917 antisense antisense MGP_LPJ_T0093368.1 MGP_LPJ_G0035024.1 mouse_genomes_project 9 95861415 95883442 - MGP_LPJ_P0093368 1190002N15Rik protein_coding protein_coding MGP_LPJ_T0002400.1 MGP_LPJ_G0002307.1 mouse_genomes_project 9 72966882 72968899 + TEC TEC MGP_LPJ_T0093987.1 MGP_LPJ_G0035145.1 mouse_genomes_project 9 109633177 109643873 + MGP_LPJ_P0093987 Rassf1 protein_coding protein_coding MGP_LPJ_T0093988.1 MGP_LPJ_G0035145.1 mouse_genomes_project 9 109633184 109636129 + Rassf1 protein_coding retained_intron MGP_LPJ_T0093989.1 MGP_LPJ_G0035145.1 mouse_genomes_project 9 109633189 109643869 + MGP_LPJ_P0093989 Rassf1 protein_coding protein_coding MGP_LPJ_T0093990.1 MGP_LPJ_G0035145.1 mouse_genomes_project 9 109633212 109643869 + MGP_LPJ_P0093990 Rassf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0093991.1 MGP_LPJ_G0035145.1 mouse_genomes_project 9 109636205 109643869 + MGP_LPJ_P0093991 Rassf1 protein_coding protein_coding MGP_LPJ_T0093992.1 MGP_LPJ_G0035145.1 mouse_genomes_project 9 109636998 109639418 + Rassf1 protein_coding processed_transcript MGP_LPJ_T0093993.1 MGP_LPJ_G0035145.1 mouse_genomes_project 9 109638228 109643869 + Rassf1 protein_coding processed_transcript MGP_LPJ_T0093994.1 MGP_LPJ_G0035145.1 mouse_genomes_project 9 109638360 109643869 + Rassf1 protein_coding retained_intron MGP_LPJ_T0093995.1 MGP_LPJ_G0035145.1 mouse_genomes_project 9 109639552 109643437 + Rassf1 protein_coding retained_intron MGP_LPJ_T0093996.1 MGP_LPJ_G0035145.1 mouse_genomes_project 9 109639559 109642033 + Rassf1 protein_coding retained_intron MGP_LPJ_T0090852.1 MGP_LPJ_G0034223.1 mouse_genomes_project 9 4470939 4480980 + MGP_LPJ_P0090852 Mmp8 protein_coding protein_coding MGP_LPJ_T0093684.1 MGP_LPJ_G0035090.1 mouse_genomes_project 9 105316922 105533025 - MGP_LPJ_P0093684 Tmem108 protein_coding protein_coding MGP_LPJ_T0093685.1 MGP_LPJ_G0035090.1 mouse_genomes_project 9 105317753 105604396 - MGP_LPJ_P0093685 Tmem108 protein_coding protein_coding MGP_LPJ_T0093686.1 MGP_LPJ_G0035090.1 mouse_genomes_project 9 105318411 105604353 - MGP_LPJ_P0093686 Tmem108 protein_coding protein_coding MGP_LPJ_T0093687.1 MGP_LPJ_G0035090.1 mouse_genomes_project 9 105318414 105327594 - Tmem108 protein_coding retained_intron MGP_LPJ_T0093688.1 MGP_LPJ_G0035090.1 mouse_genomes_project 9 105594835 105604349 - Tmem108 protein_coding retained_intron MGP_LPJ_T0092532.1 MGP_LPJ_G0034832.1 mouse_genomes_project 9 64108646 64115364 + MGP_LPJ_P0092532 Rpl4 protein_coding protein_coding MGP_LPJ_T0092200.1 MGP_LPJ_G0034742.1 mouse_genomes_project 9 55471171 55491516 + MGP_LPJ_P0092200 Rcn2 protein_coding nonsense_mediated_decay MGP_LPJ_T0092201.1 MGP_LPJ_G0034742.1 mouse_genomes_project 9 55471183 55488711 + MGP_LPJ_P0092201 Rcn2 protein_coding protein_coding MGP_LPJ_T0092202.1 MGP_LPJ_G0034742.1 mouse_genomes_project 9 55471196 55473554 + Rcn2 protein_coding retained_intron MGP_LPJ_T0092203.1 MGP_LPJ_G0034742.1 mouse_genomes_project 9 55471211 55482765 + Rcn2 protein_coding retained_intron MGP_LPJ_T0091596.1 MGP_LPJ_G0034532.1 mouse_genomes_project 9 37909429 37910371 - MGP_LPJ_P0091596 Olfr958 protein_coding protein_coding MGP_LPJ_T0094754.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114624221 114748351 - MGP_LPJ_P0094754 Arpp21 protein_coding protein_coding MGP_LPJ_T0094755.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114624221 114750384 - MGP_LPJ_P0094755 Arpp21 protein_coding protein_coding MGP_LPJ_T0094756.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114624221 114748581 - MGP_LPJ_P0094756 Arpp21 protein_coding protein_coding MGP_LPJ_T0094757.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114624221 114750384 - MGP_LPJ_P0094757 Arpp21 protein_coding protein_coding MGP_LPJ_T0094758.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114624364 114748394 - MGP_LPJ_P0094758 Arpp21 protein_coding protein_coding MGP_LPJ_T0094759.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114624366 114798553 - Arpp21 protein_coding retained_intron MGP_LPJ_T0094760.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114624388 114799146 - MGP_LPJ_P0094760 Arpp21 protein_coding protein_coding MGP_LPJ_T0094761.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114624390 114796277 - MGP_LPJ_P0094761 Arpp21 protein_coding protein_coding MGP_LPJ_T0094762.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114624867 114750265 - MGP_LPJ_P0094762 Arpp21 protein_coding nonsense_mediated_decay MGP_LPJ_T0094763.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114677300 114779420 - MGP_LPJ_P0094763 Arpp21 protein_coding protein_coding MGP_LPJ_T0094764.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114716104 114798971 - Arpp21 protein_coding retained_intron MGP_LPJ_T0094765.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114717117 114799146 - MGP_LPJ_P0094765 Arpp21 protein_coding protein_coding MGP_LPJ_T0094766.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114722433 114779510 - MGP_LPJ_P0094766 Arpp21 protein_coding protein_coding MGP_LPJ_T0094767.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114738257 114797756 - Arpp21 protein_coding retained_intron MGP_LPJ_T0094768.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114741734 114779485 - MGP_LPJ_P0094768 Arpp21 protein_coding protein_coding MGP_LPJ_T0094769.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114741780 114779485 - MGP_LPJ_P0094769 Arpp21 protein_coding protein_coding MGP_LPJ_T0094770.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114741818 114797945 - MGP_LPJ_P0094770 Arpp21 protein_coding protein_coding MGP_LPJ_T0094771.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114742694 114750544 - MGP_LPJ_P0094771 Arpp21 protein_coding protein_coding MGP_LPJ_T0094772.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114742694 114750547 - MGP_LPJ_P0094772 Arpp21 protein_coding protein_coding MGP_LPJ_T0094773.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114743634 114750522 - Arpp21 protein_coding retained_intron MGP_LPJ_T0094774.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114743640 114750567 - Arpp21 protein_coding processed_transcript MGP_LPJ_T0094775.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114743669 114750544 - Arpp21 protein_coding processed_transcript MGP_LPJ_T0094776.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114745314 114750498 - Arpp21 protein_coding retained_intron MGP_LPJ_T0094777.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114745344 114748725 - Arpp21 protein_coding processed_transcript MGP_LPJ_T0094778.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114745387 114748581 - Arpp21 protein_coding processed_transcript MGP_LPJ_T0094779.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114745641 114748568 - Arpp21 protein_coding retained_intron MGP_LPJ_T0094780.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114748359 114795678 - Arpp21 protein_coding processed_transcript MGP_LPJ_T0094781.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114750209 114798002 - Arpp21 protein_coding processed_transcript MGP_LPJ_T0094782.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114750246 114800072 - Arpp21 protein_coding processed_transcript MGP_LPJ_T0094783.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114750279 114751058 - Arpp21 protein_coding processed_transcript MGP_LPJ_T0094784.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114750547 114751092 - Arpp21 protein_coding processed_transcript MGP_LPJ_T0094785.1 MGP_LPJ_G0035265.1 mouse_genomes_project 9 114767358 114779463 - Arpp21 protein_coding retained_intron MGP_LPJ_T0094555.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112508401 112525211 - MGP_LPJ_P0094555 Dhx30 protein_coding protein_coding MGP_LPJ_T0094556.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112508401 112543245 - MGP_LPJ_P0094556 Dhx30 protein_coding protein_coding MGP_LPJ_T0094557.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112508401 112542848 - MGP_LPJ_P0094557 Dhx30 protein_coding protein_coding MGP_LPJ_T0094558.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112508401 112542837 - MGP_LPJ_P0094558 Dhx30 protein_coding protein_coding MGP_LPJ_T0094559.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112508402 112535592 - Dhx30 protein_coding retained_intron MGP_LPJ_T0094560.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112508402 112509073 - MGP_LPJ_P0094560 Dhx30 protein_coding protein_coding MGP_LPJ_T0094561.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112508402 112542852 - MGP_LPJ_P0094561 Dhx30 protein_coding protein_coding MGP_LPJ_T0094562.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112508402 112509132 - MGP_LPJ_P0094562 Dhx30 protein_coding protein_coding MGP_LPJ_T0094563.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112508402 112540492 - MGP_LPJ_P0094563 Dhx30 protein_coding protein_coding MGP_LPJ_T0094564.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112508403 112542826 - MGP_LPJ_P0094564 Dhx30 protein_coding protein_coding MGP_LPJ_T0094565.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112508404 112542750 - MGP_LPJ_P0094565 Dhx30 protein_coding protein_coding MGP_LPJ_T0094566.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112508599 112509597 - MGP_LPJ_P0094566 Dhx30 protein_coding protein_coding MGP_LPJ_T0094567.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112510400 112511536 - Dhx30 protein_coding retained_intron MGP_LPJ_T0094568.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112512024 112515542 - Dhx30 protein_coding retained_intron MGP_LPJ_T0094569.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112513871 112536050 - Dhx30 protein_coding retained_intron MGP_LPJ_T0094570.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112517030 112525163 - MGP_LPJ_P0094570 Dhx30 protein_coding nonsense_mediated_decay MGP_LPJ_T0094571.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112517138 112542199 - MGP_LPJ_P0094571 Dhx30 protein_coding protein_coding MGP_LPJ_T0094572.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112517180 112525162 - MGP_LPJ_P0094572 Dhx30 protein_coding protein_coding MGP_LPJ_T0094573.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112522874 112540721 - MGP_LPJ_P0094573 Dhx30 protein_coding protein_coding MGP_LPJ_T0094574.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112522962 112542502 - MGP_LPJ_P0094574 Dhx30 protein_coding protein_coding MGP_LPJ_T0094575.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112534710 112542834 - MGP_LPJ_P0094575 Dhx30 protein_coding protein_coding MGP_LPJ_T0094576.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112538492 112542846 - Dhx30 protein_coding processed_transcript MGP_LPJ_T0094577.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112539590 112542789 - Dhx30 protein_coding retained_intron MGP_LPJ_T0094578.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112540528 112543047 - Dhx30 protein_coding processed_transcript MGP_LPJ_T0094579.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112540836 112542523 - Dhx30 protein_coding processed_transcript MGP_LPJ_T0094580.1 MGP_LPJ_G0035230.1 mouse_genomes_project 9 112540905 112542800 - Dhx30 protein_coding processed_transcript MGP_LPJ_T0091561.1 MGP_LPJ_G0034503.1 mouse_genomes_project 9 36844431 36845382 + MGP_LPJ_P0091561 Olfr914 protein_coding protein_coding MGP_LPJ_T0018506.1 MGP_LPJ_G0015667.1 mouse_genomes_project 9 84009753 84011203 + Gm29054 processed_transcript TEC MGP_LPJ_T0018507.1 MGP_LPJ_G0015667.1 mouse_genomes_project 9 84009784 84011120 + Gm29054 processed_transcript antisense MGP_LPJ_T0002383.1 MGP_LPJ_G0002290.1 mouse_genomes_project 9 33901499 33902587 + TEC TEC MGP_LPJ_T0002414.1 MGP_LPJ_G0002321.1 mouse_genomes_project 9 77379980 77383265 + TEC TEC MGP_LPJ_T0091715.1 MGP_LPJ_G0034587.1 mouse_genomes_project 9 42864257 42866200 + MGP_LPJ_P0091715 C1qtnf5 protein_coding protein_coding MGP_LPJ_T0091716.1 MGP_LPJ_G0034587.1 mouse_genomes_project 9 42864266 42866198 + MGP_LPJ_P0091716 C1qtnf5 protein_coding protein_coding MGP_LPJ_T0091717.1 MGP_LPJ_G0034587.1 mouse_genomes_project 9 42864286 42866197 + MGP_LPJ_P0091717 C1qtnf5 protein_coding protein_coding MGP_LPJ_T0091718.1 MGP_LPJ_G0034587.1 mouse_genomes_project 9 42864321 42865506 + MGP_LPJ_P0091718 C1qtnf5 protein_coding protein_coding MGP_LPJ_T0091719.1 MGP_LPJ_G0034587.1 mouse_genomes_project 9 42864326 42866197 + MGP_LPJ_P0091719 C1qtnf5 protein_coding protein_coding MGP_LPJ_T0091720.1 MGP_LPJ_G0034587.1 mouse_genomes_project 9 42864333 42864920 + MGP_LPJ_P0091720 C1qtnf5 protein_coding protein_coding MGP_LPJ_T0091721.1 MGP_LPJ_G0034587.1 mouse_genomes_project 9 42864387 42865785 + MGP_LPJ_P0091721 C1qtnf5 protein_coding protein_coding MGP_LPJ_T0091722.1 MGP_LPJ_G0034587.1 mouse_genomes_project 9 42864527 42865557 + MGP_LPJ_P0091722 C1qtnf5 protein_coding protein_coding MGP_LPJ_T0002458.1 MGP_LPJ_G0002364.1 mouse_genomes_project 9 102817825 102823358 + TEC TEC MGP_LPJ_T0095027.1 MGP_LPJ_G0035344.1 mouse_genomes_project 9 125217380 125219330 - MGP_LPJ_P0095027 Cyp8b1 protein_coding protein_coding MGP_LPJ_T0092066.1 MGP_LPJ_G0034691.1 mouse_genomes_project 9 50360630 50384874 - MGP_LPJ_P0092066 4833427G06Rik protein_coding protein_coding MGP_LPJ_T0002490.1 MGP_LPJ_G0002396.1 mouse_genomes_project 9 112425279 112426219 + TEC TEC MGP_LPJ_T0091759.1 MGP_LPJ_G0034600.1 mouse_genomes_project 9 43166557 43180315 + MGP_LPJ_P0091759 Hyou1 protein_coding protein_coding MGP_LPJ_T0091760.1 MGP_LPJ_G0034600.1 mouse_genomes_project 9 43166613 43178659 + MGP_LPJ_P0091760 Hyou1 protein_coding nonsense_mediated_decay MGP_LPJ_T0091761.1 MGP_LPJ_G0034600.1 mouse_genomes_project 9 43166624 43177872 + Hyou1 protein_coding retained_intron MGP_LPJ_T0091762.1 MGP_LPJ_G0034600.1 mouse_genomes_project 9 43166640 43180309 + MGP_LPJ_P0091762 Hyou1 protein_coding protein_coding MGP_LPJ_T0091763.1 MGP_LPJ_G0034600.1 mouse_genomes_project 9 43166651 43173158 + Hyou1 protein_coding retained_intron MGP_LPJ_T0091764.1 MGP_LPJ_G0034600.1 mouse_genomes_project 9 43166690 43178238 + MGP_LPJ_P0091764 Hyou1 protein_coding protein_coding MGP_LPJ_T0091765.1 MGP_LPJ_G0034600.1 mouse_genomes_project 9 43167596 43171235 + MGP_LPJ_P0091765 Hyou1 protein_coding protein_coding MGP_LPJ_T0091766.1 MGP_LPJ_G0034600.1 mouse_genomes_project 9 43177796 43178448 + Hyou1 protein_coding retained_intron MGP_LPJ_T0093321.1 MGP_LPJ_G0035014.1 mouse_genomes_project 9 91342839 91384145 + MGP_LPJ_P0093321 Adamts7 protein_coding protein_coding MGP_LPJ_T0093322.1 MGP_LPJ_G0035014.1 mouse_genomes_project 9 91342848 91392115 + MGP_LPJ_P0093322 Adamts7 protein_coding protein_coding MGP_LPJ_T0093323.1 MGP_LPJ_G0035014.1 mouse_genomes_project 9 91342894 91384145 + MGP_LPJ_P0093323 Adamts7 protein_coding nonsense_mediated_decay MGP_LPJ_T0093324.1 MGP_LPJ_G0035014.1 mouse_genomes_project 9 91342972 91384035 + MGP_LPJ_P0093324 Adamts7 protein_coding protein_coding MGP_LPJ_T0093325.1 MGP_LPJ_G0035014.1 mouse_genomes_project 9 91342996 91384147 + MGP_LPJ_P0093325 Adamts7 protein_coding protein_coding MGP_LPJ_T0093326.1 MGP_LPJ_G0035014.1 mouse_genomes_project 9 91372700 91375611 + Adamts7 protein_coding retained_intron MGP_LPJ_T0093327.1 MGP_LPJ_G0035014.1 mouse_genomes_project 9 91375029 91377533 + Adamts7 protein_coding processed_transcript MGP_LPJ_T0093328.1 MGP_LPJ_G0035014.1 mouse_genomes_project 9 91379173 91384142 + Adamts7 protein_coding retained_intron MGP_LPJ_T0091687.1 MGP_LPJ_G0034575.1 mouse_genomes_project 9 41621877 41771862 - MGP_LPJ_P0091687 Arhgef12 protein_coding protein_coding MGP_LPJ_T0091688.1 MGP_LPJ_G0034575.1 mouse_genomes_project 9 41621878 41771630 - MGP_LPJ_P0091688 Arhgef12 protein_coding protein_coding MGP_LPJ_T0002483.1 MGP_LPJ_G0002389.1 mouse_genomes_project 9 110322042 110322772 - TEC TEC MGP_LPJ_T0092782.1 MGP_LPJ_G0034901.1 mouse_genomes_project 9 71446424 71493577 - MGP_LPJ_P0092782 protein_coding nonsense_mediated_decay MGP_LPJ_T0092783.1 MGP_LPJ_G0034901.1 mouse_genomes_project 9 71446425 71492951 - MGP_LPJ_P0092783 protein_coding protein_coding MGP_LPJ_T0092784.1 MGP_LPJ_G0034901.1 mouse_genomes_project 9 71447978 71496163 - MGP_LPJ_P0092784 protein_coding unknown_likely_coding MGP_LPJ_T0092785.1 MGP_LPJ_G0034901.1 mouse_genomes_project 9 71493290 71496742 - protein_coding processed_transcript MGP_LPJ_T0092786.1 MGP_LPJ_G0034901.1 mouse_genomes_project 9 71493346 71499410 - protein_coding processed_transcript MGP_LPJ_T0092787.1 MGP_LPJ_G0034901.1 mouse_genomes_project 9 71493782 71500198 - protein_coding processed_transcript MGP_LPJ_T0092788.1 MGP_LPJ_G0034901.1 mouse_genomes_project 9 71493782 71499150 - protein_coding processed_transcript MGP_LPJ_T0092789.1 MGP_LPJ_G0034901.1 mouse_genomes_project 9 71493783 71500193 - protein_coding processed_transcript MGP_LPJ_T0092790.1 MGP_LPJ_G0034901.1 mouse_genomes_project 9 71496656 71499366 - protein_coding processed_transcript MGP_LPJ_T0093021.1 MGP_LPJ_G0034949.1 mouse_genomes_project 9 78434688 78477003 + MGP_LPJ_P0093021 Gclc protein_coding protein_coding MGP_LPJ_T0009283.1 MGP_LPJ_G0007459.1 mouse_genomes_project 9 72888009 72901129 - 4930509E16Rik lincRNA lincRNA MGP_LPJ_T0009349.1 MGP_LPJ_G0007512.1 mouse_genomes_project 9 111129498 111129855 - Gm38004 lincRNA lincRNA MGP_LPJ_T0101116.1 MGP_LPJ_G0039379.1 mouse_genomes_project 9 75295579 75295722 + Gm22315 snoRNA snoRNA MGP_LPJ_T0009245.1 MGP_LPJ_G0007429.1 mouse_genomes_project 9 34828861 34846885 - lincRNA lincRNA MGP_LPJ_T0091869.1 MGP_LPJ_G0034636.1 mouse_genomes_project 9 44757805 44784141 + MGP_LPJ_P0091869 Bace1 protein_coding protein_coding MGP_LPJ_T0091870.1 MGP_LPJ_G0034636.1 mouse_genomes_project 9 44757805 44782246 + MGP_LPJ_P0091870 Bace1 protein_coding protein_coding MGP_LPJ_T0091871.1 MGP_LPJ_G0034636.1 mouse_genomes_project 9 44758465 44776965 + MGP_LPJ_P0091871 Bace1 protein_coding nonsense_mediated_decay MGP_LPJ_T0091872.1 MGP_LPJ_G0034636.1 mouse_genomes_project 9 44759139 44774499 + Bace1 protein_coding processed_transcript MGP_LPJ_T0091873.1 MGP_LPJ_G0034636.1 mouse_genomes_project 9 44772516 44781989 + Bace1 protein_coding retained_intron MGP_LPJ_T0091874.1 MGP_LPJ_G0034636.1 mouse_genomes_project 9 44774418 44780128 + MGP_LPJ_P0091874 Bace1 protein_coding protein_coding MGP_LPJ_T0091188.1 MGP_LPJ_G0034357.1 mouse_genomes_project 9 19003973 19094970 + MGP_LPJ_P0091188 Smarca4 protein_coding protein_coding MGP_LPJ_T0091189.1 MGP_LPJ_G0034357.1 mouse_genomes_project 9 19003973 19094957 + MGP_LPJ_P0091189 Smarca4 protein_coding protein_coding MGP_LPJ_T0091190.1 MGP_LPJ_G0034357.1 mouse_genomes_project 9 19004069 19094115 + MGP_LPJ_P0091190 Smarca4 protein_coding protein_coding MGP_LPJ_T0091191.1 MGP_LPJ_G0034357.1 mouse_genomes_project 9 19025136 19076937 + MGP_LPJ_P0091191 Smarca4 protein_coding protein_coding MGP_LPJ_T0093959.1 MGP_LPJ_G0035139.1 mouse_genomes_project 9 109406703 109417057 + MGP_LPJ_P0093959 6430571L13Rik protein_coding protein_coding MGP_LPJ_T0093960.1 MGP_LPJ_G0035139.1 mouse_genomes_project 9 109415524 109419651 + 6430571L13Rik protein_coding processed_transcript MGP_LPJ_T0093565.1 MGP_LPJ_G0035067.1 mouse_genomes_project 9 102161264 102214682 - MGP_LPJ_P0093565 Nck1 protein_coding protein_coding MGP_LPJ_T0093566.1 MGP_LPJ_G0035067.1 mouse_genomes_project 9 102163974 102175817 - MGP_LPJ_P0093566 Nck1 protein_coding protein_coding MGP_LPJ_T0093567.1 MGP_LPJ_G0035067.1 mouse_genomes_project 9 102166548 102214670 - MGP_LPJ_P0093567 Nck1 protein_coding protein_coding MGP_LPJ_T0093568.1 MGP_LPJ_G0035067.1 mouse_genomes_project 9 102166771 102214279 - MGP_LPJ_P0093568 Nck1 protein_coding protein_coding MGP_LPJ_T0093891.1 MGP_LPJ_G0035126.1 mouse_genomes_project 9 108543570 108545010 + MGP_LPJ_P0093891 Iqcf5 protein_coding protein_coding MGP_LPJ_T0093697.1 MGP_LPJ_G0035092.1 mouse_genomes_project 9 105894335 105929139 + MGP_LPJ_P0093697 Gm28305 protein_coding protein_coding MGP_LPJ_T0011757.1 MGP_LPJ_G0009875.1 mouse_genomes_project 9 91187136 91187404 + Gm23759 misc_RNA misc_RNA MGP_LPJ_T0091118.1 MGP_LPJ_G0034330.1 mouse_genomes_project 9 18256693 18302271 - MGP_LPJ_P0091118 Dnmt1 protein_coding protein_coding MGP_LPJ_T0092912.1 MGP_LPJ_G0034920.1 mouse_genomes_project 9 73472357 73530943 + MGP_LPJ_P0092912 Rab27a protein_coding protein_coding MGP_LPJ_T0092913.1 MGP_LPJ_G0034920.1 mouse_genomes_project 9 73472360 73530907 + MGP_LPJ_P0092913 Rab27a protein_coding protein_coding MGP_LPJ_T0092914.1 MGP_LPJ_G0034920.1 mouse_genomes_project 9 73472487 73517733 + Rab27a protein_coding retained_intron MGP_LPJ_T0092915.1 MGP_LPJ_G0034920.1 mouse_genomes_project 9 73528147 73529729 + Rab27a protein_coding retained_intron MGP_LPJ_T0092978.1 MGP_LPJ_G0034938.1 mouse_genomes_project 9 76200984 76213045 + MGP_LPJ_P0092978 Lysmd2 protein_coding protein_coding MGP_LPJ_T0005586.1 MGP_LPJ_G0004712.1 mouse_genomes_project 9 124175884 124183373 - 4930593C16Rik antisense antisense MGP_LPJ_T0099861.1 MGP_LPJ_G0038124.1 mouse_genomes_project 9 107627508 107627595 - Gm22720 snRNA snRNA MGP_LPJ_T0016043.1 MGP_LPJ_G0014134.1 mouse_genomes_project 9 81834280 81835152 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015976.1 MGP_LPJ_G0014067.1 mouse_genomes_project 9 18913258 18913617 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101114.1 MGP_LPJ_G0039377.1 mouse_genomes_project 9 70786484 70786597 + Gm24615 snoRNA snoRNA MGP_LPJ_T0099856.1 MGP_LPJ_G0038119.1 mouse_genomes_project 9 95629664 95629821 + Gm24200 snRNA snRNA MGP_LPJ_T0094324.1 MGP_LPJ_G0035191.1 mouse_genomes_project 9 110671448 110688239 + MGP_LPJ_P0094324 Qrich1 protein_coding protein_coding MGP_LPJ_T0094325.1 MGP_LPJ_G0035191.1 mouse_genomes_project 9 110671729 110683218 + MGP_LPJ_P0094325 Qrich1 protein_coding protein_coding MGP_LPJ_T0094326.1 MGP_LPJ_G0035191.1 mouse_genomes_project 9 110671745 110673287 + Qrich1 protein_coding processed_transcript MGP_LPJ_T0094327.1 MGP_LPJ_G0035191.1 mouse_genomes_project 9 110671745 110703180 + MGP_LPJ_P0094327 Qrich1 protein_coding protein_coding MGP_LPJ_T0094328.1 MGP_LPJ_G0035191.1 mouse_genomes_project 9 110671752 110721442 + MGP_LPJ_P0094328 Qrich1 protein_coding protein_coding MGP_LPJ_T0094329.1 MGP_LPJ_G0035191.1 mouse_genomes_project 9 110671756 110721614 + MGP_LPJ_P0094329 Qrich1 protein_coding protein_coding MGP_LPJ_T0094330.1 MGP_LPJ_G0035191.1 mouse_genomes_project 9 110671794 110683204 + MGP_LPJ_P0094330 Qrich1 protein_coding protein_coding MGP_LPJ_T0094331.1 MGP_LPJ_G0035191.1 mouse_genomes_project 9 110671797 110683244 + MGP_LPJ_P0094331 Qrich1 protein_coding protein_coding MGP_LPJ_T0094332.1 MGP_LPJ_G0035191.1 mouse_genomes_project 9 110671798 110702949 + MGP_LPJ_P0094332 Qrich1 protein_coding protein_coding MGP_LPJ_T0094333.1 MGP_LPJ_G0035191.1 mouse_genomes_project 9 110672095 110684972 + Qrich1 protein_coding retained_intron MGP_LPJ_T0094334.1 MGP_LPJ_G0035191.1 mouse_genomes_project 9 110672119 110683240 + MGP_LPJ_P0094334 Qrich1 protein_coding protein_coding MGP_LPJ_T0094335.1 MGP_LPJ_G0035191.1 mouse_genomes_project 9 110682756 110687989 + MGP_LPJ_P0094335 Qrich1 protein_coding protein_coding MGP_LPJ_T0094336.1 MGP_LPJ_G0035191.1 mouse_genomes_project 9 110715812 110721018 + Qrich1 protein_coding retained_intron MGP_LPJ_T0094337.1 MGP_LPJ_G0035191.1 mouse_genomes_project 9 110716150 110720849 + Qrich1 protein_coding retained_intron MGP_LPJ_T0091036.1 MGP_LPJ_G0034296.1 mouse_genomes_project 9 16852910 16853828 - MGP_LPJ_P0091036 Olfr853 protein_coding protein_coding MGP_LPJ_T0093011.1 MGP_LPJ_G0034947.1 mouse_genomes_project 9 78098231 78215040 - MGP_LPJ_P0093011 Lrrc1 protein_coding protein_coding MGP_LPJ_T0093012.1 MGP_LPJ_G0034947.1 mouse_genomes_project 9 78098389 78214265 - MGP_LPJ_P0093012 Lrrc1 protein_coding protein_coding MGP_LPJ_T0093013.1 MGP_LPJ_G0034947.1 mouse_genomes_project 9 78098483 78116060 - Lrrc1 protein_coding processed_transcript MGP_LPJ_T0093014.1 MGP_LPJ_G0034947.1 mouse_genomes_project 9 78098498 78109568 - MGP_LPJ_P0093014 Lrrc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0093015.1 MGP_LPJ_G0034947.1 mouse_genomes_project 9 78102462 78109864 - Lrrc1 protein_coding retained_intron MGP_LPJ_T0093016.1 MGP_LPJ_G0034947.1 mouse_genomes_project 9 78116065 78215020 - MGP_LPJ_P0093016 Lrrc1 protein_coding protein_coding MGP_LPJ_T0093017.1 MGP_LPJ_G0034947.1 mouse_genomes_project 9 78125432 78168167 - Lrrc1 protein_coding processed_transcript MGP_LPJ_T0093018.1 MGP_LPJ_G0034947.1 mouse_genomes_project 9 78139468 78215018 - Lrrc1 protein_coding processed_transcript MGP_LPJ_T0093019.1 MGP_LPJ_G0034947.1 mouse_genomes_project 9 78210682 78214960 - Lrrc1 protein_coding retained_intron MGP_LPJ_T0102474.1 MGP_LPJ_G0040510.1 mouse_genomes_project 9 17240623 17241064 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0101137.1 MGP_LPJ_G0039400.1 mouse_genomes_project 9 110975024 110975171 - Gm23034 snoRNA snoRNA MGP_LPJ_T0091126.1 MGP_LPJ_G0034338.1 mouse_genomes_project 9 18430014 18448173 - MGP_LPJ_P0091126 Raver1 protein_coding protein_coding MGP_LPJ_T0091769.1 MGP_LPJ_G0034602.1 mouse_genomes_project 9 43193374 43197129 - MGP_LPJ_P0091769 Trappc4 protein_coding protein_coding MGP_LPJ_T0092767.1 MGP_LPJ_G0034894.1 mouse_genomes_project 9 70718044 70733314 - MGP_LPJ_P0092767 Ccnb2 protein_coding protein_coding MGP_LPJ_T0094640.1 MGP_LPJ_G0035241.1 mouse_genomes_project 9 113083381 113112762 - MGP_LPJ_P0094640 Nbeal2 protein_coding protein_coding MGP_LPJ_T0094641.1 MGP_LPJ_G0035241.1 mouse_genomes_project 9 113083381 113112762 - MGP_LPJ_P0094641 Nbeal2 protein_coding protein_coding MGP_LPJ_T0094642.1 MGP_LPJ_G0035241.1 mouse_genomes_project 9 113083464 113112743 - MGP_LPJ_P0094642 Nbeal2 protein_coding protein_coding MGP_LPJ_T0094643.1 MGP_LPJ_G0035241.1 mouse_genomes_project 9 113083635 113097218 - MGP_LPJ_P0094643 Nbeal2 protein_coding protein_coding MGP_LPJ_T0094644.1 MGP_LPJ_G0035241.1 mouse_genomes_project 9 113083635 113090644 - MGP_LPJ_P0094644 Nbeal2 protein_coding protein_coding MGP_LPJ_T0094645.1 MGP_LPJ_G0035241.1 mouse_genomes_project 9 113086828 113087471 - Nbeal2 protein_coding retained_intron MGP_LPJ_T0094646.1 MGP_LPJ_G0035241.1 mouse_genomes_project 9 113087500 113088261 - Nbeal2 protein_coding retained_intron MGP_LPJ_T0094647.1 MGP_LPJ_G0035241.1 mouse_genomes_project 9 113088162 113093042 - MGP_LPJ_P0094647 Nbeal2 protein_coding nonsense_mediated_decay MGP_LPJ_T0094648.1 MGP_LPJ_G0035241.1 mouse_genomes_project 9 113089658 113090473 - Nbeal2 protein_coding retained_intron MGP_LPJ_T0094649.1 MGP_LPJ_G0035241.1 mouse_genomes_project 9 113093220 113093688 - Nbeal2 protein_coding retained_intron MGP_LPJ_T0094650.1 MGP_LPJ_G0035241.1 mouse_genomes_project 9 113096918 113103971 - MGP_LPJ_P0094650 Nbeal2 protein_coding protein_coding MGP_LPJ_T0011759.1 MGP_LPJ_G0009877.1 mouse_genomes_project 9 104793389 104793711 + Gm25842 misc_RNA misc_RNA MGP_LPJ_T0016127.1 MGP_LPJ_G0014218.1 mouse_genomes_project 9 124499081 124499429 + processed_pseudogene processed_pseudogene MGP_LPJ_T0091532.1 MGP_LPJ_G0034475.1 mouse_genomes_project 9 36056952 36057888 + MGP_LPJ_P0091532 Olfr877 protein_coding protein_coding MGP_LPJ_T0005462.1 MGP_LPJ_G0004627.1 mouse_genomes_project 9 44776563 44778143 - Gm16536 antisense antisense MGP_LPJ_T0005496.1 MGP_LPJ_G0004648.1 mouse_genomes_project 9 72719001 72772470 - BC065403 antisense antisense MGP_LPJ_T0005497.1 MGP_LPJ_G0004648.1 mouse_genomes_project 9 72771169 72772392 - BC065403 antisense antisense MGP_LPJ_T0091547.1 MGP_LPJ_G0034489.1 mouse_genomes_project 9 36481635 36482588 + MGP_LPJ_P0091547 Olfr143 protein_coding protein_coding MGP_LPJ_T0094381.1 MGP_LPJ_G0035199.1 mouse_genomes_project 9 110860896 110903941 + MGP_LPJ_P0094381 Prkar2a protein_coding protein_coding MGP_LPJ_T0094382.1 MGP_LPJ_G0035199.1 mouse_genomes_project 9 110863724 110927330 + MGP_LPJ_P0094382 Prkar2a protein_coding protein_coding MGP_LPJ_T0094383.1 MGP_LPJ_G0035199.1 mouse_genomes_project 9 110864038 110923888 + MGP_LPJ_P0094383 Prkar2a protein_coding protein_coding MGP_LPJ_T0094384.1 MGP_LPJ_G0035199.1 mouse_genomes_project 9 110892632 110921157 + MGP_LPJ_P0094384 Prkar2a protein_coding protein_coding MGP_LPJ_T0094385.1 MGP_LPJ_G0035199.1 mouse_genomes_project 9 110916926 110918241 + Prkar2a protein_coding retained_intron MGP_LPJ_T0094386.1 MGP_LPJ_G0035199.1 mouse_genomes_project 9 110925138 110926397 + Prkar2a protein_coding processed_transcript MGP_LPJ_T0091693.1 MGP_LPJ_G0034579.1 mouse_genomes_project 9 41939353 41962856 + MGP_LPJ_P0091693 protein_coding protein_coding MGP_LPJ_T0099812.1 MGP_LPJ_G0038075.1 mouse_genomes_project 9 28100988 28101095 - Gm26435 snRNA snRNA MGP_LPJ_T0092388.1 MGP_LPJ_G0034800.1 mouse_genomes_project 9 59320721 59343561 + MGP_LPJ_P0092388 Pkm protein_coding protein_coding MGP_LPJ_T0092389.1 MGP_LPJ_G0034800.1 mouse_genomes_project 9 59320721 59343561 + MGP_LPJ_P0092389 Pkm protein_coding protein_coding MGP_LPJ_T0091217.1 MGP_LPJ_G0034372.1 mouse_genomes_project 9 19443579 19497017 - MGP_LPJ_P0091217 Elavl3 protein_coding protein_coding MGP_LPJ_T0091218.1 MGP_LPJ_G0034372.1 mouse_genomes_project 9 19454119 19467110 - MGP_LPJ_P0091218 Elavl3 protein_coding unknown_likely_coding MGP_LPJ_T0093516.1 MGP_LPJ_G0035057.1 mouse_genomes_project 9 100859077 100880864 + MGP_LPJ_P0093516 Cep70 protein_coding protein_coding MGP_LPJ_T0093517.1 MGP_LPJ_G0035057.1 mouse_genomes_project 9 100859152 100913740 + MGP_LPJ_P0093517 Cep70 protein_coding protein_coding MGP_LPJ_T0093518.1 MGP_LPJ_G0035057.1 mouse_genomes_project 9 100859163 100871556 + Cep70 protein_coding retained_intron MGP_LPJ_T0093519.1 MGP_LPJ_G0035057.1 mouse_genomes_project 9 100859171 100882030 + MGP_LPJ_P0093519 Cep70 protein_coding protein_coding MGP_LPJ_T0093520.1 MGP_LPJ_G0035057.1 mouse_genomes_project 9 100859173 100911321 + MGP_LPJ_P0093520 Cep70 protein_coding protein_coding MGP_LPJ_T0093521.1 MGP_LPJ_G0035057.1 mouse_genomes_project 9 100859192 100879721 + MGP_LPJ_P0093521 Cep70 protein_coding protein_coding MGP_LPJ_T0093522.1 MGP_LPJ_G0035057.1 mouse_genomes_project 9 100859236 100888729 + MGP_LPJ_P0093522 Cep70 protein_coding nonsense_mediated_decay MGP_LPJ_T0093523.1 MGP_LPJ_G0035057.1 mouse_genomes_project 9 100861996 100880168 + Cep70 protein_coding retained_intron MGP_LPJ_T0093524.1 MGP_LPJ_G0035057.1 mouse_genomes_project 9 100904790 100909687 + Cep70 protein_coding retained_intron MGP_LPJ_T0093977.1 MGP_LPJ_G0035143.1 mouse_genomes_project 9 109623836 109627357 + MGP_LPJ_P0093977 Nprl2 protein_coding protein_coding MGP_LPJ_T0093978.1 MGP_LPJ_G0035143.1 mouse_genomes_project 9 109623851 109626285 + MGP_LPJ_P0093978 Nprl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0093979.1 MGP_LPJ_G0035143.1 mouse_genomes_project 9 109623855 109627346 + Nprl2 protein_coding retained_intron MGP_LPJ_T0093980.1 MGP_LPJ_G0035143.1 mouse_genomes_project 9 109623871 109625339 + Nprl2 protein_coding retained_intron MGP_LPJ_T0093981.1 MGP_LPJ_G0035143.1 mouse_genomes_project 9 109625627 109626111 + Nprl2 protein_coding retained_intron MGP_LPJ_T0011124.1 MGP_LPJ_G0009242.1 mouse_genomes_project 9 114679716 114679792 - Mir128-2 miRNA miRNA MGP_LPJ_T0098328.1 MGP_LPJ_G0036609.1 mouse_genomes_project 9 33560033 33560141 - Gm24188 rRNA rRNA MGP_LPJ_T0101074.1 MGP_LPJ_G0039337.1 mouse_genomes_project 9 12398742 12398813 + Gm24299 snoRNA snoRNA MGP_LPJ_T0094029.1 MGP_LPJ_G0035152.1 mouse_genomes_project 9 109680150 109687995 - MGP_LPJ_P0094029 Sema3b protein_coding nonsense_mediated_decay MGP_LPJ_T0094030.1 MGP_LPJ_G0035152.1 mouse_genomes_project 9 109680693 109691704 - MGP_LPJ_P0094030 Sema3b protein_coding protein_coding MGP_LPJ_T0094031.1 MGP_LPJ_G0035152.1 mouse_genomes_project 9 109680829 109691674 - MGP_LPJ_P0094031 Sema3b protein_coding protein_coding MGP_LPJ_T0094032.1 MGP_LPJ_G0035152.1 mouse_genomes_project 9 109680830 109689132 - MGP_LPJ_P0094032 Sema3b protein_coding protein_coding MGP_LPJ_T0094033.1 MGP_LPJ_G0035152.1 mouse_genomes_project 9 109680831 109691668 - MGP_LPJ_P0094033 Sema3b protein_coding protein_coding MGP_LPJ_T0094034.1 MGP_LPJ_G0035152.1 mouse_genomes_project 9 109680831 109687876 - MGP_LPJ_P0094034 Sema3b protein_coding protein_coding MGP_LPJ_T0094035.1 MGP_LPJ_G0035152.1 mouse_genomes_project 9 109682284 109683788 - Sema3b protein_coding retained_intron MGP_LPJ_T0094036.1 MGP_LPJ_G0035152.1 mouse_genomes_project 9 109684096 109684648 - Sema3b protein_coding retained_intron MGP_LPJ_T0094037.1 MGP_LPJ_G0035152.1 mouse_genomes_project 9 109685633 109687743 - MGP_LPJ_P0094037 Sema3b protein_coding protein_coding MGP_LPJ_T0094038.1 MGP_LPJ_G0035152.1 mouse_genomes_project 9 109685788 109689392 - MGP_LPJ_P0094038 Sema3b protein_coding protein_coding MGP_LPJ_T0094039.1 MGP_LPJ_G0035152.1 mouse_genomes_project 9 109685820 109689159 - MGP_LPJ_P0094039 Sema3b protein_coding protein_coding MGP_LPJ_T0094040.1 MGP_LPJ_G0035152.1 mouse_genomes_project 9 109686640 109689157 - MGP_LPJ_P0094040 Sema3b protein_coding protein_coding MGP_LPJ_T0094041.1 MGP_LPJ_G0035152.1 mouse_genomes_project 9 109687520 109691695 - MGP_LPJ_P0094041 Sema3b protein_coding protein_coding MGP_LPJ_T0094042.1 MGP_LPJ_G0035152.1 mouse_genomes_project 9 109687564 109689661 - Sema3b protein_coding processed_transcript MGP_LPJ_T0090811.1 MGP_LPJ_G0034208.1 mouse_genomes_project 9 1068560 1090580 + MGP_LPJ_P0090811 Kbtbd3 protein_coding protein_coding MGP_LPJ_T0009281.1 MGP_LPJ_G0007457.1 mouse_genomes_project 9 72561583 72585034 - Gm27188 lincRNA lincRNA MGP_LPJ_T0099853.1 MGP_LPJ_G0038116.1 mouse_genomes_project 9 91495256 91495427 + Gm22717 snRNA snRNA MGP_LPJ_T0011082.1 MGP_LPJ_G0009200.1 mouse_genomes_project 9 50385827 50385904 - Mir34c miRNA miRNA MGP_LPJ_T0090967.1 MGP_LPJ_G0034260.1 mouse_genomes_project 9 12320476 12341814 + MGP_LPJ_P0090967 Vstm5 protein_coding protein_coding MGP_LPJ_T0093118.1 MGP_LPJ_G0034974.1 mouse_genomes_project 9 82431768 82437310 - MGP_LPJ_P0093118 Htr1b protein_coding protein_coding MGP_LPJ_T0093119.1 MGP_LPJ_G0034974.1 mouse_genomes_project 9 82434824 82436097 - MGP_LPJ_P0093119 Htr1b protein_coding protein_coding MGP_LPJ_T0094958.1 MGP_LPJ_G0035326.1 mouse_genomes_project 9 123742534 123773971 + MGP_LPJ_P0094958 Entpd3 protein_coding protein_coding MGP_LPJ_T0094959.1 MGP_LPJ_G0035326.1 mouse_genomes_project 9 123763721 123766642 + Entpd3 protein_coding retained_intron MGP_LPJ_T0099843.1 MGP_LPJ_G0038106.1 mouse_genomes_project 9 73014617 73022389 + Gm23057 snRNA snRNA MGP_LPJ_T0009303.1 MGP_LPJ_G0007476.1 mouse_genomes_project 9 85720151 85733068 + 4930554C24Rik lincRNA lincRNA MGP_LPJ_T0011069.1 MGP_LPJ_G0009187.1 mouse_genomes_project 9 19206658 19206718 - Mir7083 miRNA miRNA MGP_LPJ_T0093058.1 MGP_LPJ_G0034960.1 mouse_genomes_project 9 79101920 79104536 - MGP_LPJ_P0093058 Ooep protein_coding protein_coding MGP_LPJ_T0092086.1 MGP_LPJ_G0034702.1 mouse_genomes_project 9 52404456 52560553 - MGP_LPJ_P0092086 Ddx10 protein_coding protein_coding MGP_LPJ_T0093355.1 MGP_LPJ_G0035021.1 mouse_genomes_project 9 93560353 93578074 + 1700057G04Rik protein_coding processed_transcript MGP_LPJ_T0093356.1 MGP_LPJ_G0035021.1 mouse_genomes_project 9 93560353 93594572 + MGP_LPJ_P0093356 1700057G04Rik protein_coding protein_coding MGP_LPJ_T0093357.1 MGP_LPJ_G0035021.1 mouse_genomes_project 9 93560353 93609277 + MGP_LPJ_P0093357 1700057G04Rik protein_coding protein_coding MGP_LPJ_T0093358.1 MGP_LPJ_G0035021.1 mouse_genomes_project 9 93560384 93602484 + 1700057G04Rik protein_coding processed_transcript MGP_LPJ_T0093359.1 MGP_LPJ_G0035021.1 mouse_genomes_project 9 93594393 93609220 + MGP_LPJ_P0093359 1700057G04Rik protein_coding protein_coding MGP_LPJ_T0093360.1 MGP_LPJ_G0035021.1 mouse_genomes_project 9 93602497 93609277 + MGP_LPJ_P0093360 1700057G04Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0093162.1 MGP_LPJ_G0034981.1 mouse_genomes_project 9 84675828 84706987 - MGP_LPJ_P0093162 Elovl4 protein_coding protein_coding MGP_LPJ_T0093163.1 MGP_LPJ_G0034981.1 mouse_genomes_project 9 84677798 84707012 - MGP_LPJ_P0093163 Elovl4 protein_coding protein_coding MGP_LPJ_T0101136.1 MGP_LPJ_G0039399.1 mouse_genomes_project 9 110583209 110583318 - Gm25456 snoRNA snoRNA MGP_LPJ_T0101097.1 MGP_LPJ_G0039360.1 mouse_genomes_project 9 40936115 40936247 - Gm26272 snoRNA snoRNA MGP_LPJ_T0002476.1 MGP_LPJ_G0002382.1 mouse_genomes_project 9 106998482 107001761 + TEC TEC MGP_LPJ_T0101145.1 MGP_LPJ_G0039408.1 mouse_genomes_project 9 123289078 123289227 + Snora62 snoRNA snoRNA MGP_LPJ_T0016029.1 MGP_LPJ_G0014120.1 mouse_genomes_project 9 75675686 75676909 - processed_pseudogene processed_pseudogene MGP_LPJ_T0095026.1 MGP_LPJ_G0035343.1 mouse_genomes_project 9 125201520 125214096 + MGP_LPJ_P0095026 Ackr2 protein_coding protein_coding MGP_LPJ_T0094043.1 MGP_LPJ_G0035153.1 mouse_genomes_project 9 109696603 109721247 - MGP_LPJ_P0094043 Gnai2 protein_coding protein_coding MGP_LPJ_T0094044.1 MGP_LPJ_G0035153.1 mouse_genomes_project 9 109696603 109721192 - MGP_LPJ_P0094044 Gnai2 protein_coding protein_coding MGP_LPJ_T0094045.1 MGP_LPJ_G0035153.1 mouse_genomes_project 9 109697418 109698526 - Gnai2 protein_coding retained_intron MGP_LPJ_T0094046.1 MGP_LPJ_G0035153.1 mouse_genomes_project 9 109698134 109698990 - Gnai2 protein_coding retained_intron MGP_LPJ_T0094047.1 MGP_LPJ_G0035153.1 mouse_genomes_project 9 109698703 109699863 - Gnai2 protein_coding retained_intron MGP_LPJ_T0094048.1 MGP_LPJ_G0035153.1 mouse_genomes_project 9 109698978 109712497 - MGP_LPJ_P0094048 Gnai2 protein_coding protein_coding MGP_LPJ_T0094049.1 MGP_LPJ_G0035153.1 mouse_genomes_project 9 109703731 109721214 - Gnai2 protein_coding retained_intron MGP_LPJ_T0094050.1 MGP_LPJ_G0035153.1 mouse_genomes_project 9 109704167 109705100 - Gnai2 protein_coding retained_intron MGP_LPJ_T0094051.1 MGP_LPJ_G0035153.1 mouse_genomes_project 9 109704289 109721217 - MGP_LPJ_P0094051 Gnai2 protein_coding protein_coding MGP_LPJ_T0094052.1 MGP_LPJ_G0035153.1 mouse_genomes_project 9 109720979 109721223 - MGP_LPJ_P0094052 Gnai2 protein_coding protein_coding MGP_LPJ_T0094960.1 MGP_LPJ_G0035327.1 mouse_genomes_project 9 123777191 123780593 + MGP_LPJ_P0094960 Rpl14 protein_coding protein_coding MGP_LPJ_T0091563.1 MGP_LPJ_G0034505.1 mouse_genomes_project 9 36922881 36923811 - MGP_LPJ_P0091563 Olfr917 protein_coding protein_coding MGP_LPJ_T0094142.1 MGP_LPJ_G0035164.1 mouse_genomes_project 9 110085949 110086516 + Uba7 protein_coding processed_transcript MGP_LPJ_T0094143.1 MGP_LPJ_G0035164.1 mouse_genomes_project 9 110085978 110094502 + MGP_LPJ_P0094143 Uba7 protein_coding protein_coding MGP_LPJ_T0094144.1 MGP_LPJ_G0035164.1 mouse_genomes_project 9 110086014 110094502 + Uba7 protein_coding retained_intron MGP_LPJ_T0094145.1 MGP_LPJ_G0035164.1 mouse_genomes_project 9 110086019 110094502 + Uba7 protein_coding retained_intron MGP_LPJ_T0094146.1 MGP_LPJ_G0035164.1 mouse_genomes_project 9 110086026 110090944 + Uba7 protein_coding retained_intron MGP_LPJ_T0094147.1 MGP_LPJ_G0035164.1 mouse_genomes_project 9 110086050 110086595 + Uba7 protein_coding processed_transcript MGP_LPJ_T0094148.1 MGP_LPJ_G0035164.1 mouse_genomes_project 9 110086050 110094502 + Uba7 protein_coding retained_intron MGP_LPJ_T0094149.1 MGP_LPJ_G0035164.1 mouse_genomes_project 9 110086099 110094504 + MGP_LPJ_P0094149 Uba7 protein_coding nonsense_mediated_decay MGP_LPJ_T0094150.1 MGP_LPJ_G0035164.1 mouse_genomes_project 9 110086400 110094506 + MGP_LPJ_P0094150 Uba7 protein_coding nonsense_mediated_decay MGP_LPJ_T0094151.1 MGP_LPJ_G0035164.1 mouse_genomes_project 9 110086752 110087411 + Uba7 protein_coding retained_intron MGP_LPJ_T0094152.1 MGP_LPJ_G0035164.1 mouse_genomes_project 9 110087335 110087969 + Uba7 protein_coding retained_intron MGP_LPJ_T0094153.1 MGP_LPJ_G0035164.1 mouse_genomes_project 9 110090183 110093230 + Uba7 protein_coding retained_intron MGP_LPJ_T0094154.1 MGP_LPJ_G0035164.1 mouse_genomes_project 9 110091334 110093645 + Uba7 protein_coding retained_intron MGP_LPJ_T0094155.1 MGP_LPJ_G0035164.1 mouse_genomes_project 9 110093470 110094499 + Uba7 protein_coding retained_intron MGP_LPJ_T0094156.1 MGP_LPJ_G0035164.1 mouse_genomes_project 9 110093480 110094397 + Uba7 protein_coding retained_intron MGP_LPJ_T0094697.1 MGP_LPJ_G0035255.1 mouse_genomes_project 9 113440197 113458000 + MGP_LPJ_P0094697 Lrrc2 protein_coding protein_coding MGP_LPJ_T0094698.1 MGP_LPJ_G0035255.1 mouse_genomes_project 9 113440221 113465630 + MGP_LPJ_P0094698 Lrrc2 protein_coding protein_coding MGP_LPJ_T0094699.1 MGP_LPJ_G0035255.1 mouse_genomes_project 9 113447284 113463076 + MGP_LPJ_P0094699 Lrrc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0005534.1 MGP_LPJ_G0004671.1 mouse_genomes_project 9 98583944 98587151 + Gm16185 antisense antisense MGP_LPJ_T0101112.1 MGP_LPJ_G0039375.1 mouse_genomes_project 9 68711025 68711098 + Gm22962 snoRNA snoRNA MGP_LPJ_T0002472.1 MGP_LPJ_G0002378.1 mouse_genomes_project 9 105433757 105435345 - TEC TEC MGP_LPJ_T0002444.1 MGP_LPJ_G0002350.1 mouse_genomes_project 9 97663345 97666342 + TEC TEC MGP_LPJ_T0092162.1 MGP_LPJ_G0034731.1 mouse_genomes_project 9 54362539 54390772 + MGP_LPJ_P0092162 Chrna5 protein_coding protein_coding MGP_LPJ_T0092163.1 MGP_LPJ_G0034731.1 mouse_genomes_project 9 54363275 54389568 + MGP_LPJ_P0092163 Chrna5 protein_coding unknown_likely_coding MGP_LPJ_T0092275.1 MGP_LPJ_G0034767.1 mouse_genomes_project 9 57102959 57109695 + MGP_LPJ_P0092275 Ulk3 protein_coding protein_coding MGP_LPJ_T0101079.1 MGP_LPJ_G0039342.1 mouse_genomes_project 9 12401898 12402031 + snoRNA snoRNA MGP_LPJ_T0002468.1 MGP_LPJ_G0002374.1 mouse_genomes_project 9 104929498 104931972 + TEC TEC MGP_LPJ_T0002412.1 MGP_LPJ_G0002319.1 mouse_genomes_project 9 76243559 76244247 + TEC TEC MGP_LPJ_T0091100.1 MGP_LPJ_G0034323.1 mouse_genomes_project 9 17999127 18062618 - MGP_LPJ_P0091100 Olfm2 protein_coding unknown_likely_coding MGP_LPJ_T0091101.1 MGP_LPJ_G0034323.1 mouse_genomes_project 9 17999425 18064034 - MGP_LPJ_P0091101 Olfm2 protein_coding protein_coding MGP_LPJ_T0016074.1 MGP_LPJ_G0014165.1 mouse_genomes_project 9 93944561 93945375 + processed_pseudogene processed_pseudogene MGP_LPJ_T0090884.1 MGP_LPJ_G0034233.1 mouse_genomes_project 9 5157110 5171821 + MGP_LPJ_P0090884 1700128F08Rik protein_coding protein_coding MGP_LPJ_T0000381.1 MGP_LPJ_G0000319.1 mouse_genomes_project 9 126465478 126465549 + mt-Tn Mt_tRNA Mt_tRNA MGP_LPJ_T0015996.1 MGP_LPJ_G0014087.1 mouse_genomes_project 9 43121378 43122212 - processed_pseudogene processed_pseudogene MGP_LPJ_T0092212.1 MGP_LPJ_G0034745.1 mouse_genomes_project 9 55627877 55669890 - MGP_LPJ_P0092212 Peak1 protein_coding protein_coding MGP_LPJ_T0092213.1 MGP_LPJ_G0034745.1 mouse_genomes_project 9 55631877 55844526 - MGP_LPJ_P0092213 Peak1 protein_coding protein_coding MGP_LPJ_T0092214.1 MGP_LPJ_G0034745.1 mouse_genomes_project 9 55686812 55844501 - MGP_LPJ_P0092214 Peak1 protein_coding protein_coding MGP_LPJ_T0092215.1 MGP_LPJ_G0034745.1 mouse_genomes_project 9 55843155 55844509 - Peak1 protein_coding retained_intron MGP_LPJ_T0099849.1 MGP_LPJ_G0038112.1 mouse_genomes_project 9 85106465 85106650 + Gm26146 snRNA snRNA MGP_LPJ_T0092451.1 MGP_LPJ_G0034811.1 mouse_genomes_project 9 61707024 61708279 - MGP_LPJ_P0092451 Rplp1 protein_coding protein_coding MGP_LPJ_T0091305.1 MGP_LPJ_G0034408.1 mouse_genomes_project 9 25483237 25483981 + Opcml protein_coding processed_transcript MGP_LPJ_T0091306.1 MGP_LPJ_G0034408.1 mouse_genomes_project 9 25483409 26653544 + MGP_LPJ_P0091306 Opcml protein_coding protein_coding MGP_LPJ_T0091307.1 MGP_LPJ_G0034408.1 mouse_genomes_project 9 25483764 25724224 + Opcml protein_coding processed_transcript MGP_LPJ_T0091308.1 MGP_LPJ_G0034408.1 mouse_genomes_project 9 26117003 26119807 + Opcml protein_coding processed_transcript MGP_LPJ_T0091309.1 MGP_LPJ_G0034408.1 mouse_genomes_project 9 26117651 26649203 + MGP_LPJ_P0091309 Opcml protein_coding protein_coding MGP_LPJ_T0091310.1 MGP_LPJ_G0034408.1 mouse_genomes_project 9 26117938 26536314 + Opcml protein_coding retained_intron MGP_LPJ_T0091311.1 MGP_LPJ_G0034408.1 mouse_genomes_project 9 26118024 26372337 + Opcml protein_coding processed_transcript MGP_LPJ_T0091312.1 MGP_LPJ_G0034408.1 mouse_genomes_project 9 26383598 26397463 + Opcml protein_coding processed_transcript MGP_LPJ_T0002415.1 MGP_LPJ_G0002322.1 mouse_genomes_project 9 77963418 77964428 - TEC TEC MGP_LPJ_T0009253.1 MGP_LPJ_G0007436.1 mouse_genomes_project 9 44282039 44296363 - 4833428L15Rik lincRNA lincRNA MGP_LPJ_T0091577.1 MGP_LPJ_G0034513.1 mouse_genomes_project 9 37119364 37120382 + MGP_LPJ_P0091577 Olfr26 protein_coding protein_coding MGP_LPJ_T0090808.1 MGP_LPJ_G0034205.1 mouse_genomes_project 9 107360 186555 + MGP_LPJ_P0090808 Cwf19l2 protein_coding protein_coding MGP_LPJ_T0002406.1 MGP_LPJ_G0002313.1 mouse_genomes_project 9 73317604 73319045 + TEC TEC MGP_LPJ_T0093386.1 MGP_LPJ_G0035030.1 mouse_genomes_project 9 97103264 97151800 - MGP_LPJ_P0093386 Trpc1 protein_coding protein_coding MGP_LPJ_T0093387.1 MGP_LPJ_G0035030.1 mouse_genomes_project 9 97104809 97151800 - MGP_LPJ_P0093387 Trpc1 protein_coding protein_coding MGP_LPJ_T0093388.1 MGP_LPJ_G0035030.1 mouse_genomes_project 9 97104809 97151800 - MGP_LPJ_P0093388 Trpc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0093389.1 MGP_LPJ_G0035030.1 mouse_genomes_project 9 97104809 97151800 - MGP_LPJ_P0093389 Trpc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0093390.1 MGP_LPJ_G0035030.1 mouse_genomes_project 9 97114531 97117639 - Trpc1 protein_coding retained_intron MGP_LPJ_T0093391.1 MGP_LPJ_G0035030.1 mouse_genomes_project 9 97120239 97131163 - MGP_LPJ_P0093391 Trpc1 protein_coding protein_coding MGP_LPJ_T0093392.1 MGP_LPJ_G0035030.1 mouse_genomes_project 9 97150479 97151817 - Trpc1 protein_coding retained_intron MGP_LPJ_T0002410.1 MGP_LPJ_G0002317.1 mouse_genomes_project 9 74016617 74018645 - TEC TEC MGP_LPJ_T0005504.1 MGP_LPJ_G0004654.1 mouse_genomes_project 9 79123957 79125157 - 4930542C12Rik antisense antisense MGP_LPJ_T0092372.1 MGP_LPJ_G0034795.1 mouse_genomes_project 9 59038404 59141746 - MGP_LPJ_P0092372 Arih1 protein_coding protein_coding MGP_LPJ_T0092373.1 MGP_LPJ_G0034795.1 mouse_genomes_project 9 59043259 59141750 - MGP_LPJ_P0092373 Arih1 protein_coding nonsense_mediated_decay MGP_LPJ_T0092374.1 MGP_LPJ_G0034795.1 mouse_genomes_project 9 59043440 59141479 - MGP_LPJ_P0092374 Arih1 protein_coding protein_coding MGP_LPJ_T0092375.1 MGP_LPJ_G0034795.1 mouse_genomes_project 9 59046010 59056952 - MGP_LPJ_P0092375 Arih1 protein_coding nonsense_mediated_decay MGP_LPJ_T0092376.1 MGP_LPJ_G0034795.1 mouse_genomes_project 9 59046095 59057205 - Arih1 protein_coding retained_intron MGP_LPJ_T0092377.1 MGP_LPJ_G0034795.1 mouse_genomes_project 9 59076880 59141188 - Arih1 protein_coding retained_intron MGP_LPJ_T0092378.1 MGP_LPJ_G0034795.1 mouse_genomes_project 9 59089547 59141215 - Arih1 protein_coding retained_intron MGP_LPJ_T0093514.1 MGP_LPJ_G0035056.1 mouse_genomes_project 9 100843202 100852980 - MGP_LPJ_P0093514 Faiml protein_coding protein_coding MGP_LPJ_T0093515.1 MGP_LPJ_G0035056.1 mouse_genomes_project 9 100843294 100852111 - MGP_LPJ_P0093515 Faiml protein_coding protein_coding MGP_LPJ_T0092473.1 MGP_LPJ_G0034817.1 mouse_genomes_project 9 62251800 62366277 - MGP_LPJ_P0092473 Coro2b protein_coding protein_coding MGP_LPJ_T0092474.1 MGP_LPJ_G0034817.1 mouse_genomes_project 9 62262112 62264526 - MGP_LPJ_P0092474 Coro2b protein_coding protein_coding MGP_LPJ_T0092475.1 MGP_LPJ_G0034817.1 mouse_genomes_project 9 62264460 62339261 - MGP_LPJ_P0092475 Coro2b protein_coding protein_coding MGP_LPJ_T0092476.1 MGP_LPJ_G0034817.1 mouse_genomes_project 9 62264787 62265778 - Coro2b protein_coding retained_intron MGP_LPJ_T0092477.1 MGP_LPJ_G0034817.1 mouse_genomes_project 9 62265861 62277555 - MGP_LPJ_P0092477 Coro2b protein_coding protein_coding MGP_LPJ_T0092478.1 MGP_LPJ_G0034817.1 mouse_genomes_project 9 62269016 62349078 - MGP_LPJ_P0092478 Coro2b protein_coding protein_coding MGP_LPJ_T0092479.1 MGP_LPJ_G0034817.1 mouse_genomes_project 9 62281326 62366193 - Coro2b protein_coding retained_intron MGP_LPJ_T0018517.1 MGP_LPJ_G0015671.1 mouse_genomes_project 9 97034894 97036189 - Gm16127 processed_transcript processed_transcript MGP_LPJ_T0005505.1 MGP_LPJ_G0004655.1 mouse_genomes_project 9 79366938 79367695 - 4921509A06Rik antisense antisense MGP_LPJ_T0095065.1 MGP_LPJ_G0035361.1 mouse_genomes_project 9 126422755 126471664 - MGP_LPJ_P0095065 Zdhhc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0095066.1 MGP_LPJ_G0035361.1 mouse_genomes_project 9 126430737 126471722 - MGP_LPJ_P0095066 Zdhhc3 protein_coding protein_coding MGP_LPJ_T0095067.1 MGP_LPJ_G0035361.1 mouse_genomes_project 9 126433423 126471697 - MGP_LPJ_P0095067 Zdhhc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0095068.1 MGP_LPJ_G0035361.1 mouse_genomes_project 9 126434091 126471683 - MGP_LPJ_P0095068 Zdhhc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0095069.1 MGP_LPJ_G0035361.1 mouse_genomes_project 9 126434631 126471695 - MGP_LPJ_P0095069 Zdhhc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0095070.1 MGP_LPJ_G0035361.1 mouse_genomes_project 9 126434891 126458532 - MGP_LPJ_P0095070 Zdhhc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0095071.1 MGP_LPJ_G0035361.1 mouse_genomes_project 9 126436949 126471638 - MGP_LPJ_P0095071 Zdhhc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0095072.1 MGP_LPJ_G0035361.1 mouse_genomes_project 9 126439435 126471721 - Zdhhc3 protein_coding retained_intron MGP_LPJ_T0095073.1 MGP_LPJ_G0035361.1 mouse_genomes_project 9 126440883 126471641 - MGP_LPJ_P0095073 Zdhhc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0095074.1 MGP_LPJ_G0035361.1 mouse_genomes_project 9 126445620 126471695 - MGP_LPJ_P0095074 Zdhhc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0095075.1 MGP_LPJ_G0035361.1 mouse_genomes_project 9 126458502 126471349 - MGP_LPJ_P0095075 Zdhhc3 protein_coding protein_coding MGP_LPJ_T0002436.1 MGP_LPJ_G0002342.1 mouse_genomes_project 9 92548402 92550837 - TEC TEC MGP_LPJ_T0095046.1 MGP_LPJ_G0035351.1 mouse_genomes_project 9 126088286 126143391 + MGP_LPJ_P0095046 Topaz1 protein_coding protein_coding MGP_LPJ_T0092274.1 MGP_LPJ_G0034766.1 mouse_genomes_project 9 57074734 57102305 + MGP_LPJ_P0092274 Scamp2 protein_coding protein_coding MGP_LPJ_T0016116.1 MGP_LPJ_G0014207.1 mouse_genomes_project 9 110478405 110478769 + processed_pseudogene processed_pseudogene MGP_LPJ_T0092648.1 MGP_LPJ_G0034869.1 mouse_genomes_project 9 66182859 66197966 + MGP_LPJ_P0092648 Fam96a protein_coding protein_coding MGP_LPJ_T0094621.1 MGP_LPJ_G0035238.1 mouse_genomes_project 9 112926865 112941853 + MGP_LPJ_P0094621 Kif9 protein_coding protein_coding MGP_LPJ_T0094622.1 MGP_LPJ_G0035238.1 mouse_genomes_project 9 112926901 112978105 + MGP_LPJ_P0094622 Kif9 protein_coding protein_coding MGP_LPJ_T0094623.1 MGP_LPJ_G0035238.1 mouse_genomes_project 9 112926901 112977964 + MGP_LPJ_P0094623 Kif9 protein_coding protein_coding MGP_LPJ_T0094624.1 MGP_LPJ_G0035238.1 mouse_genomes_project 9 112926901 112975057 + MGP_LPJ_P0094624 Kif9 protein_coding protein_coding MGP_LPJ_T0094625.1 MGP_LPJ_G0035238.1 mouse_genomes_project 9 112928112 112976763 + MGP_LPJ_P0094625 Kif9 protein_coding protein_coding MGP_LPJ_T0093605.1 MGP_LPJ_G0035074.1 mouse_genomes_project 9 103677269 103682008 + MGP_LPJ_P0093605 9630041A04Rik protein_coding protein_coding MGP_LPJ_T0005518.1 MGP_LPJ_G0004664.1 mouse_genomes_project 9 97015441 97046354 - Gm16126 antisense antisense MGP_LPJ_T0005444.1 MGP_LPJ_G0004613.1 mouse_genomes_project 9 19667714 19702961 - antisense antisense MGP_LPJ_T0005445.1 MGP_LPJ_G0004613.1 mouse_genomes_project 9 19695847 19702982 - antisense antisense MGP_LPJ_T0005446.1 MGP_LPJ_G0004613.1 mouse_genomes_project 9 19696408 19697623 - antisense antisense MGP_LPJ_T0091143.1 MGP_LPJ_G0034345.1 mouse_genomes_project 9 18642001 18643527 - Kri1 protein_coding retained_intron MGP_LPJ_T0091144.1 MGP_LPJ_G0034345.1 mouse_genomes_project 9 18642054 18657756 - MGP_LPJ_P0091144 Kri1 protein_coding protein_coding MGP_LPJ_T0091145.1 MGP_LPJ_G0034345.1 mouse_genomes_project 9 18647095 18657772 - Kri1 protein_coding retained_intron MGP_LPJ_T0091146.1 MGP_LPJ_G0034345.1 mouse_genomes_project 9 18649193 18657759 - Kri1 protein_coding retained_intron MGP_LPJ_T0091147.1 MGP_LPJ_G0034345.1 mouse_genomes_project 9 18650147 18657772 - Kri1 protein_coding retained_intron MGP_LPJ_T0091148.1 MGP_LPJ_G0034345.1 mouse_genomes_project 9 18657327 18657759 - Kri1 protein_coding retained_intron MGP_LPJ_T0091835.1 MGP_LPJ_G0034620.1 mouse_genomes_project 9 43814106 43819367 + MGP_LPJ_P0091835 Cd3d protein_coding protein_coding MGP_LPJ_T0009249.1 MGP_LPJ_G0007433.1 mouse_genomes_project 9 42870968 42886302 + lincRNA lincRNA MGP_LPJ_T0094500.1 MGP_LPJ_G0035218.1 mouse_genomes_project 9 111450679 111888179 - MGP_LPJ_P0094500 protein_coding protein_coding MGP_LPJ_T0094502.1 MGP_LPJ_G0035218.1 mouse_genomes_project 9 111451021 111888179 - MGP_LPJ_P0094502 protein_coding protein_coding MGP_LPJ_T0094503.1 MGP_LPJ_G0035218.1 mouse_genomes_project 9 111451024 111888174 - MGP_LPJ_P0094503 protein_coding protein_coding MGP_LPJ_T0094505.1 MGP_LPJ_G0035218.1 mouse_genomes_project 9 111476990 112156831 - MGP_LPJ_P0094505 protein_coding protein_coding MGP_LPJ_T0094538.1 MGP_LPJ_G0035229.1 mouse_genomes_project 9 112347207 112508037 + MGP_LPJ_P0094538 Map4 protein_coding protein_coding MGP_LPJ_T0094539.1 MGP_LPJ_G0035229.1 mouse_genomes_project 9 112347547 112425045 + MGP_LPJ_P0094539 Map4 protein_coding protein_coding MGP_LPJ_T0094540.1 MGP_LPJ_G0035229.1 mouse_genomes_project 9 112347611 112508029 + MGP_LPJ_P0094540 Map4 protein_coding protein_coding MGP_LPJ_T0094541.1 MGP_LPJ_G0035229.1 mouse_genomes_project 9 112385576 112422587 + Map4 protein_coding processed_transcript MGP_LPJ_T0094542.1 MGP_LPJ_G0035229.1 mouse_genomes_project 9 112447217 112450170 + Map4 protein_coding processed_transcript MGP_LPJ_T0094543.1 MGP_LPJ_G0035229.1 mouse_genomes_project 9 112458742 112496871 + MGP_LPJ_P0094543 Map4 protein_coding protein_coding MGP_LPJ_T0094544.1 MGP_LPJ_G0035229.1 mouse_genomes_project 9 112475099 112508028 + MGP_LPJ_P0094544 Map4 protein_coding protein_coding MGP_LPJ_T0094545.1 MGP_LPJ_G0035229.1 mouse_genomes_project 9 112475103 112507255 + MGP_LPJ_P0094545 Map4 protein_coding protein_coding MGP_LPJ_T0094546.1 MGP_LPJ_G0035229.1 mouse_genomes_project 9 112475121 112505824 + MGP_LPJ_P0094546 Map4 protein_coding protein_coding MGP_LPJ_T0094547.1 MGP_LPJ_G0035229.1 mouse_genomes_project 9 112486294 112492918 + Map4 protein_coding processed_transcript MGP_LPJ_T0094548.1 MGP_LPJ_G0035229.1 mouse_genomes_project 9 112491749 112506169 + MGP_LPJ_P0094548 Map4 protein_coding protein_coding MGP_LPJ_T0094549.1 MGP_LPJ_G0035229.1 mouse_genomes_project 9 112491749 112506579 + MGP_LPJ_P0094549 Map4 protein_coding protein_coding MGP_LPJ_T0094550.1 MGP_LPJ_G0035229.1 mouse_genomes_project 9 112492989 112505877 + MGP_LPJ_P0094550 Map4 protein_coding protein_coding MGP_LPJ_T0094551.1 MGP_LPJ_G0035229.1 mouse_genomes_project 9 112493013 112505996 + MGP_LPJ_P0094551 Map4 protein_coding protein_coding MGP_LPJ_T0094552.1 MGP_LPJ_G0035229.1 mouse_genomes_project 9 112501685 112504117 + Map4 protein_coding retained_intron MGP_LPJ_T0094553.1 MGP_LPJ_G0035229.1 mouse_genomes_project 9 112502134 112506232 + MGP_LPJ_P0094553 Map4 protein_coding protein_coding MGP_LPJ_T0094554.1 MGP_LPJ_G0035229.1 mouse_genomes_project 9 112503881 112506579 + MGP_LPJ_P0094554 Map4 protein_coding protein_coding MGP_LPJ_T0092147.1 MGP_LPJ_G0034726.1 mouse_genomes_project 9 54139981 54150455 + MGP_LPJ_P0092147 Crabp1 protein_coding protein_coding MGP_LPJ_T0092362.1 MGP_LPJ_G0034790.1 mouse_genomes_project 9 58239169 58245671 - Rec114 protein_coding processed_transcript MGP_LPJ_T0092363.1 MGP_LPJ_G0034790.1 mouse_genomes_project 9 58239197 58250649 - Rec114 protein_coding processed_transcript MGP_LPJ_T0092364.1 MGP_LPJ_G0034790.1 mouse_genomes_project 9 58239200 58246747 - MGP_LPJ_P0092364 Rec114 protein_coding protein_coding MGP_LPJ_T0092365.1 MGP_LPJ_G0034790.1 mouse_genomes_project 9 58239261 58335146 - MGP_LPJ_P0092365 Rec114 protein_coding protein_coding MGP_LPJ_T0093179.1 MGP_LPJ_G0034985.1 mouse_genomes_project 9 86686462 86748759 - MGP_LPJ_P0093179 Ibtk protein_coding protein_coding MGP_LPJ_T0093180.1 MGP_LPJ_G0034985.1 mouse_genomes_project 9 86686656 86748759 - MGP_LPJ_P0093180 Ibtk protein_coding nonsense_mediated_decay MGP_LPJ_T0093181.1 MGP_LPJ_G0034985.1 mouse_genomes_project 9 86686670 86719910 - Ibtk protein_coding retained_intron MGP_LPJ_T0093182.1 MGP_LPJ_G0034985.1 mouse_genomes_project 9 86707255 86717628 - Ibtk protein_coding retained_intron MGP_LPJ_T0093183.1 MGP_LPJ_G0034985.1 mouse_genomes_project 9 86719269 86748739 - Ibtk protein_coding retained_intron MGP_LPJ_T0093184.1 MGP_LPJ_G0034985.1 mouse_genomes_project 9 86727377 86730501 - Ibtk protein_coding retained_intron MGP_LPJ_T0091752.1 MGP_LPJ_G0034594.1 mouse_genomes_project 9 43069849 43083140 - MGP_LPJ_P0091752 Hinfp protein_coding protein_coding MGP_LPJ_T0093445.1 MGP_LPJ_G0035039.1 mouse_genomes_project 9 98154311 98227408 - MGP_LPJ_P0093445 Zbtb38 protein_coding protein_coding MGP_LPJ_T0093446.1 MGP_LPJ_G0035039.1 mouse_genomes_project 9 98156961 98204681 - MGP_LPJ_P0093446 Zbtb38 protein_coding protein_coding MGP_LPJ_T0093447.1 MGP_LPJ_G0035039.1 mouse_genomes_project 9 98157793 98191895 - MGP_LPJ_P0093447 Zbtb38 protein_coding non_stop_decay MGP_LPJ_T0093448.1 MGP_LPJ_G0035039.1 mouse_genomes_project 9 98158933 98192345 - MGP_LPJ_P0093448 Zbtb38 protein_coding protein_coding MGP_LPJ_T0093449.1 MGP_LPJ_G0035039.1 mouse_genomes_project 9 98160012 98191610 - MGP_LPJ_P0093449 Zbtb38 protein_coding protein_coding MGP_LPJ_T0093450.1 MGP_LPJ_G0035039.1 mouse_genomes_project 9 98190254 98202043 - Zbtb38 protein_coding processed_transcript MGP_LPJ_T0093451.1 MGP_LPJ_G0035039.1 mouse_genomes_project 9 98202857 98227262 - Zbtb38 protein_coding retained_intron MGP_LPJ_T0093452.1 MGP_LPJ_G0035039.1 mouse_genomes_project 9 98202857 98204349 - Zbtb38 protein_coding processed_transcript MGP_LPJ_T0093453.1 MGP_LPJ_G0035039.1 mouse_genomes_project 9 98204466 98205776 - Zbtb38 protein_coding processed_transcript MGP_LPJ_T0093454.1 MGP_LPJ_G0035039.1 mouse_genomes_project 9 98204563 98205675 - Zbtb38 protein_coding retained_intron MGP_LPJ_T0093455.1 MGP_LPJ_G0035039.1 mouse_genomes_project 9 98221855 98227304 - Zbtb38 protein_coding retained_intron MGP_LPJ_T0093456.1 MGP_LPJ_G0035039.1 mouse_genomes_project 9 98222057 98227270 - Zbtb38 protein_coding processed_transcript MGP_LPJ_T0005456.1 MGP_LPJ_G0004623.1 mouse_genomes_project 9 40621166 40632510 + Gm16214 antisense antisense MGP_LPJ_T0005466.1 MGP_LPJ_G0004630.1 mouse_genomes_project 9 50568742 50574452 + 2010007H06Rik antisense antisense MGP_LPJ_T0005467.1 MGP_LPJ_G0004630.1 mouse_genomes_project 9 50570524 50571152 + 2010007H06Rik antisense antisense MGP_LPJ_T0095060.1 MGP_LPJ_G0035359.1 mouse_genomes_project 9 126373448 126375557 + MGP_LPJ_P0095060 Tmem42 protein_coding protein_coding MGP_LPJ_T0091149.1 MGP_LPJ_G0034346.1 mouse_genomes_project 9 18658265 18661030 - MGP_LPJ_P0091149 Cdkn2d protein_coding protein_coding MGP_LPJ_T0091983.1 MGP_LPJ_G0034673.1 mouse_genomes_project 9 49784907 49804713 - MGP_LPJ_P0091983 Bco2 protein_coding unknown_likely_coding MGP_LPJ_T0094084.1 MGP_LPJ_G0035157.1 mouse_genomes_project 9 109834640 109866185 - MGP_LPJ_P0094084 Rbm5 protein_coding protein_coding MGP_LPJ_T0094085.1 MGP_LPJ_G0035157.1 mouse_genomes_project 9 109834765 109866170 - Rbm5 protein_coding retained_intron MGP_LPJ_T0094086.1 MGP_LPJ_G0035157.1 mouse_genomes_project 9 109834766 109855691 - Rbm5 protein_coding retained_intron MGP_LPJ_T0094087.1 MGP_LPJ_G0035157.1 mouse_genomes_project 9 109834770 109866169 - MGP_LPJ_P0094087 Rbm5 protein_coding nonsense_mediated_decay MGP_LPJ_T0094088.1 MGP_LPJ_G0035157.1 mouse_genomes_project 9 109834770 109866176 - MGP_LPJ_P0094088 Rbm5 protein_coding protein_coding MGP_LPJ_T0094089.1 MGP_LPJ_G0035157.1 mouse_genomes_project 9 109836243 109838566 - MGP_LPJ_P0094089 Rbm5 protein_coding protein_coding MGP_LPJ_T0094090.1 MGP_LPJ_G0035157.1 mouse_genomes_project 9 109837612 109838514 - Rbm5 protein_coding retained_intron MGP_LPJ_T0094091.1 MGP_LPJ_G0035157.1 mouse_genomes_project 9 109838548 109844245 - Rbm5 protein_coding retained_intron MGP_LPJ_T0094092.1 MGP_LPJ_G0035157.1 mouse_genomes_project 9 109839473 109844134 - Rbm5 protein_coding retained_intron MGP_LPJ_T0094093.1 MGP_LPJ_G0035157.1 mouse_genomes_project 9 109840322 109866140 - MGP_LPJ_P0094093 Rbm5 protein_coding nonsense_mediated_decay MGP_LPJ_T0094094.1 MGP_LPJ_G0035157.1 mouse_genomes_project 9 109840423 109846114 - MGP_LPJ_P0094094 Rbm5 protein_coding protein_coding MGP_LPJ_T0094095.1 MGP_LPJ_G0035157.1 mouse_genomes_project 9 109844515 109846166 - Rbm5 protein_coding retained_intron MGP_LPJ_T0094096.1 MGP_LPJ_G0035157.1 mouse_genomes_project 9 109844722 109849259 - Rbm5 protein_coding retained_intron MGP_LPJ_T0094097.1 MGP_LPJ_G0035157.1 mouse_genomes_project 9 109846084 109849771 - Rbm5 protein_coding retained_intron MGP_LPJ_T0094098.1 MGP_LPJ_G0035157.1 mouse_genomes_project 9 109846113 109862786 - MGP_LPJ_P0094098 Rbm5 protein_coding nonsense_mediated_decay MGP_LPJ_T0094099.1 MGP_LPJ_G0035157.1 mouse_genomes_project 9 109849263 109866161 - MGP_LPJ_P0094099 Rbm5 protein_coding nonsense_mediated_decay MGP_LPJ_T0094100.1 MGP_LPJ_G0035157.1 mouse_genomes_project 9 109849267 109852360 - Rbm5 protein_coding retained_intron MGP_LPJ_T0094101.1 MGP_LPJ_G0035157.1 mouse_genomes_project 9 109849291 109865684 - MGP_LPJ_P0094101 Rbm5 protein_coding protein_coding MGP_LPJ_T0094102.1 MGP_LPJ_G0035157.1 mouse_genomes_project 9 109853577 109866148 - Rbm5 protein_coding retained_intron MGP_LPJ_T0094103.1 MGP_LPJ_G0035157.1 mouse_genomes_project 9 109855446 109866148 - MGP_LPJ_P0094103 Rbm5 protein_coding protein_coding MGP_LPJ_T0094104.1 MGP_LPJ_G0035157.1 mouse_genomes_project 9 109855511 109866134 - MGP_LPJ_P0094104 Rbm5 protein_coding protein_coding MGP_LPJ_T0094105.1 MGP_LPJ_G0035157.1 mouse_genomes_project 9 109860282 109866178 - Rbm5 protein_coding retained_intron MGP_LPJ_T0094106.1 MGP_LPJ_G0035157.1 mouse_genomes_project 9 109861795 109866175 - Rbm5 protein_coding retained_intron MGP_LPJ_T0094107.1 MGP_LPJ_G0035157.1 mouse_genomes_project 9 109864373 109866148 - Rbm5 protein_coding retained_intron MGP_LPJ_T0091439.1 MGP_LPJ_G0034444.1 mouse_genomes_project 9 33853265 33855338 - MGP_LPJ_P0091439 D730048I06Rik protein_coding protein_coding MGP_LPJ_T0092462.1 MGP_LPJ_G0034815.1 mouse_genomes_project 9 62082231 62093583 - MGP_LPJ_P0092462 Spesp1 protein_coding protein_coding MGP_LPJ_T0094897.1 MGP_LPJ_G0035303.1 mouse_genomes_project 9 122241053 122261791 - MGP_LPJ_P0094897 Slc22a14 protein_coding protein_coding MGP_LPJ_T0094898.1 MGP_LPJ_G0035303.1 mouse_genomes_project 9 122241054 122479261 - MGP_LPJ_P0094898 Slc22a14 protein_coding protein_coding MGP_LPJ_T0094899.1 MGP_LPJ_G0035303.1 mouse_genomes_project 9 122241266 122245249 - MGP_LPJ_P0094899 Slc22a14 protein_coding protein_coding MGP_LPJ_T0094900.1 MGP_LPJ_G0035303.1 mouse_genomes_project 9 122252562 122261746 - MGP_LPJ_P0094900 Slc22a14 protein_coding protein_coding MGP_LPJ_T0098692.1 MGP_LPJ_G0036960.1 mouse_genomes_project 9 110748220 110748728 - Gm38163 sense_intronic sense_intronic MGP_LPJ_T0092120.1 MGP_LPJ_G0034717.1 mouse_genomes_project 9 53635368 53691146 + MGP_LPJ_P0092120 Gldn protein_coding protein_coding MGP_LPJ_T0018504.1 MGP_LPJ_G0015665.1 mouse_genomes_project 9 80594993 80604613 + 4930429F24Rik processed_transcript processed_transcript MGP_LPJ_T0016063.1 MGP_LPJ_G0014154.1 mouse_genomes_project 9 91189072 91189719 + processed_pseudogene processed_pseudogene MGP_LPJ_T0091576.1 MGP_LPJ_G0034512.1 mouse_genomes_project 9 37091633 37092701 + MGP_LPJ_P0091576 Olfr923 protein_coding protein_coding MGP_LPJ_T0090805.1 MGP_LPJ_G0034204.1 mouse_genomes_project 9 37940 90719 + MGP_LPJ_P0090805 Alkbh8 protein_coding protein_coding MGP_LPJ_T0090806.1 MGP_LPJ_G0034204.1 mouse_genomes_project 9 37985 89268 + MGP_LPJ_P0090806 Alkbh8 protein_coding unknown_likely_coding MGP_LPJ_T0090807.1 MGP_LPJ_G0034204.1 mouse_genomes_project 9 41599 89511 + MGP_LPJ_P0090807 Alkbh8 protein_coding protein_coding MGP_LPJ_T0093209.1 MGP_LPJ_G0034989.1 mouse_genomes_project 9 87596457 87614894 - MGP_LPJ_P0093209 Pgm3 protein_coding protein_coding MGP_LPJ_T0093210.1 MGP_LPJ_G0034989.1 mouse_genomes_project 9 87597081 87614895 - MGP_LPJ_P0093210 Pgm3 protein_coding protein_coding MGP_LPJ_T0093211.1 MGP_LPJ_G0034989.1 mouse_genomes_project 9 87597336 87600024 - Pgm3 protein_coding retained_intron MGP_LPJ_T0093212.1 MGP_LPJ_G0034989.1 mouse_genomes_project 9 87597761 87614860 - Pgm3 protein_coding retained_intron MGP_LPJ_T0093213.1 MGP_LPJ_G0034989.1 mouse_genomes_project 9 87598606 87614909 - Pgm3 protein_coding retained_intron MGP_LPJ_T0091562.1 MGP_LPJ_G0034504.1 mouse_genomes_project 9 36899167 36900100 - MGP_LPJ_P0091562 Olfr916 protein_coding protein_coding MGP_LPJ_T0002432.1 MGP_LPJ_G0002338.1 mouse_genomes_project 9 90387357 90391236 - TEC TEC MGP_LPJ_T0093872.1 MGP_LPJ_G0035121.1 mouse_genomes_project 9 108495515 108497493 - MGP_LPJ_P0093872 Gpr62 protein_coding protein_coding MGP_LPJ_T0005450.1 MGP_LPJ_G0004617.1 mouse_genomes_project 9 30477877 30487248 + Gm27201 antisense antisense MGP_LPJ_T0092170.1 MGP_LPJ_G0034735.1 mouse_genomes_project 9 54602157 54619755 + MGP_LPJ_P0092170 Fbxo22 protein_coding protein_coding MGP_LPJ_T0092171.1 MGP_LPJ_G0034735.1 mouse_genomes_project 9 54607004 54616082 + MGP_LPJ_P0092171 Fbxo22 protein_coding protein_coding MGP_LPJ_T0002430.1 MGP_LPJ_G0002336.1 mouse_genomes_project 9 89886649 89888413 + TEC TEC MGP_LPJ_T0009356.1 MGP_LPJ_G0007517.1 mouse_genomes_project 9 114791364 114792028 + 2310075C17Rik lincRNA lincRNA MGP_LPJ_T0101127.1 MGP_LPJ_G0039390.1 mouse_genomes_project 9 98964751 98964878 - Gm25607 snoRNA snoRNA MGP_LPJ_T0094824.1 MGP_LPJ_G0035286.1 mouse_genomes_project 9 117798436 118052656 + MGP_LPJ_P0094824 Osbpl10 protein_coding protein_coding MGP_LPJ_T0094825.1 MGP_LPJ_G0035286.1 mouse_genomes_project 9 117811571 118052658 + MGP_LPJ_P0094825 Osbpl10 protein_coding protein_coding MGP_LPJ_T0094826.1 MGP_LPJ_G0035286.1 mouse_genomes_project 9 117820087 117981291 + MGP_LPJ_P0094826 Osbpl10 protein_coding protein_coding MGP_LPJ_T0094827.1 MGP_LPJ_G0035286.1 mouse_genomes_project 9 117836918 118052652 + MGP_LPJ_P0094827 Osbpl10 protein_coding nonsense_mediated_decay MGP_LPJ_T0094828.1 MGP_LPJ_G0035286.1 mouse_genomes_project 9 117872917 117885803 + MGP_LPJ_P0094828 Osbpl10 protein_coding protein_coding MGP_LPJ_T0094829.1 MGP_LPJ_G0035286.1 mouse_genomes_project 9 117885769 118052656 + MGP_LPJ_P0094829 Osbpl10 protein_coding protein_coding MGP_LPJ_T0094830.1 MGP_LPJ_G0035286.1 mouse_genomes_project 9 117903681 118039389 + Osbpl10 protein_coding processed_transcript MGP_LPJ_T0094831.1 MGP_LPJ_G0035286.1 mouse_genomes_project 9 117935405 118037795 + Osbpl10 protein_coding processed_transcript MGP_LPJ_T0016080.1 MGP_LPJ_G0014171.1 mouse_genomes_project 9 96800431 96801180 + processed_pseudogene processed_pseudogene MGP_LPJ_T0091426.1 MGP_LPJ_G0034436.1 mouse_genomes_project 9 33618652 33628246 - MGP_LPJ_P0091426 Hyls1 protein_coding protein_coding MGP_LPJ_T0091427.1 MGP_LPJ_G0034436.1 mouse_genomes_project 9 33622302 33627945 - Hyls1 protein_coding retained_intron MGP_LPJ_T0092269.1 MGP_LPJ_G0034765.1 mouse_genomes_project 9 57055913 57064424 - MGP_LPJ_P0092269 Mpi protein_coding protein_coding MGP_LPJ_T0092270.1 MGP_LPJ_G0034765.1 mouse_genomes_project 9 57059923 57063927 - Mpi protein_coding retained_intron MGP_LPJ_T0092271.1 MGP_LPJ_G0034765.1 mouse_genomes_project 9 57060252 57061335 - Mpi protein_coding retained_intron MGP_LPJ_T0092272.1 MGP_LPJ_G0034765.1 mouse_genomes_project 9 57060792 57064370 - MGP_LPJ_P0092272 Mpi protein_coding nonsense_mediated_decay MGP_LPJ_T0092273.1 MGP_LPJ_G0034765.1 mouse_genomes_project 9 57061638 57064377 - Mpi protein_coding retained_intron MGP_LPJ_T0092452.1 MGP_LPJ_G0034812.1 mouse_genomes_project 9 61711023 61741052 - MGP_LPJ_P0092452 Kif23 protein_coding protein_coding MGP_LPJ_T0092453.1 MGP_LPJ_G0034812.1 mouse_genomes_project 9 61711403 61740875 - MGP_LPJ_P0092453 Kif23 protein_coding unknown_likely_coding MGP_LPJ_T0093261.1 MGP_LPJ_G0035002.1 mouse_genomes_project 9 89520556 89560843 - MGP_LPJ_P0093261 Syncrip protein_coding protein_coding MGP_LPJ_T0093262.1 MGP_LPJ_G0035002.1 mouse_genomes_project 9 89525984 89558974 - MGP_LPJ_P0093262 Syncrip protein_coding protein_coding MGP_LPJ_T0093263.1 MGP_LPJ_G0035002.1 mouse_genomes_project 9 89526186 89560452 - MGP_LPJ_P0093263 Syncrip protein_coding protein_coding MGP_LPJ_T0093264.1 MGP_LPJ_G0035002.1 mouse_genomes_project 9 89526235 89560517 - MGP_LPJ_P0093264 Syncrip protein_coding protein_coding MGP_LPJ_T0093265.1 MGP_LPJ_G0035002.1 mouse_genomes_project 9 89527484 89560470 - MGP_LPJ_P0093265 Syncrip protein_coding nonsense_mediated_decay MGP_LPJ_T0093266.1 MGP_LPJ_G0035002.1 mouse_genomes_project 9 89529660 89558962 - MGP_LPJ_P0093266 Syncrip protein_coding protein_coding MGP_LPJ_T0093267.1 MGP_LPJ_G0035002.1 mouse_genomes_project 9 89529660 89560310 - MGP_LPJ_P0093267 Syncrip protein_coding protein_coding MGP_LPJ_T0093268.1 MGP_LPJ_G0035002.1 mouse_genomes_project 9 89541040 89558953 - Syncrip protein_coding retained_intron MGP_LPJ_T0093269.1 MGP_LPJ_G0035002.1 mouse_genomes_project 9 89554109 89559378 - MGP_LPJ_P0093269 Syncrip protein_coding protein_coding MGP_LPJ_T0093270.1 MGP_LPJ_G0035002.1 mouse_genomes_project 9 89556931 89559433 - Syncrip protein_coding retained_intron MGP_LPJ_T0093271.1 MGP_LPJ_G0035002.1 mouse_genomes_project 9 89557870 89560843 - MGP_LPJ_P0093271 Syncrip protein_coding protein_coding MGP_LPJ_T0091178.1 MGP_LPJ_G0034354.1 mouse_genomes_project 9 18905702 18971536 + MGP_LPJ_P0091178 Carm1 protein_coding unknown_likely_coding MGP_LPJ_T0091179.1 MGP_LPJ_G0034354.1 mouse_genomes_project 9 18928440 18972815 + Carm1 protein_coding retained_intron MGP_LPJ_T0091180.1 MGP_LPJ_G0034354.1 mouse_genomes_project 9 18929082 18961152 + Carm1 protein_coding processed_transcript MGP_LPJ_T0091181.1 MGP_LPJ_G0034354.1 mouse_genomes_project 9 18956782 18962024 + Carm1 protein_coding processed_transcript MGP_LPJ_T0091182.1 MGP_LPJ_G0034354.1 mouse_genomes_project 9 18970565 18971548 + Carm1 protein_coding processed_transcript MGP_LPJ_T0091183.1 MGP_LPJ_G0034354.1 mouse_genomes_project 9 18970750 18971477 + Carm1 protein_coding processed_transcript MGP_LPJ_T0094865.1 MGP_LPJ_G0035296.1 mouse_genomes_project 9 121640505 121948604 + MGP_LPJ_P0094865 Itga9 protein_coding protein_coding MGP_LPJ_T0094866.1 MGP_LPJ_G0035296.1 mouse_genomes_project 9 121726852 121851522 + Itga9 protein_coding processed_transcript MGP_LPJ_T0094867.1 MGP_LPJ_G0035296.1 mouse_genomes_project 9 121753154 121945304 + MGP_LPJ_P0094867 Itga9 protein_coding protein_coding MGP_LPJ_T0094868.1 MGP_LPJ_G0035296.1 mouse_genomes_project 9 121851574 121888540 + MGP_LPJ_P0094868 Itga9 protein_coding protein_coding MGP_LPJ_T0094869.1 MGP_LPJ_G0035296.1 mouse_genomes_project 9 121884319 121918310 + Itga9 protein_coding processed_transcript MGP_LPJ_T0094870.1 MGP_LPJ_G0035296.1 mouse_genomes_project 9 121918438 121944893 + Itga9 protein_coding processed_transcript MGP_LPJ_T0002429.1 MGP_LPJ_G0002335.1 mouse_genomes_project 9 88837117 88838946 - TEC TEC MGP_LPJ_T0093363.1 MGP_LPJ_G0035023.1 mouse_genomes_project 9 93806982 93875243 + MGP_LPJ_P0093363 Plod2 protein_coding protein_coding MGP_LPJ_T0093364.1 MGP_LPJ_G0035023.1 mouse_genomes_project 9 93807023 93875235 + MGP_LPJ_P0093364 Plod2 protein_coding protein_coding MGP_LPJ_T0093365.1 MGP_LPJ_G0035023.1 mouse_genomes_project 9 93838385 93858405 + Plod2 protein_coding retained_intron MGP_LPJ_T0093366.1 MGP_LPJ_G0035023.1 mouse_genomes_project 9 93862065 93867787 + Plod2 protein_coding retained_intron MGP_LPJ_T0093367.1 MGP_LPJ_G0035023.1 mouse_genomes_project 9 93868062 93869338 + Plod2 protein_coding retained_intron MGP_LPJ_T0009367.1 MGP_LPJ_G0007525.1 mouse_genomes_project 9 123037745 123039906 - Gm2449 lincRNA lincRNA MGP_LPJ_T0009326.1 MGP_LPJ_G0007492.1 mouse_genomes_project 9 98564998 98572313 + Gm26767 lincRNA lincRNA MGP_LPJ_T0011076.1 MGP_LPJ_G0009194.1 mouse_genomes_project 9 41065608 41065677 + Gm44311 miRNA miRNA MGP_LPJ_T0011058.1 MGP_LPJ_G0009176.1 mouse_genomes_project 9 6850150 6850241 + Mir6237 miRNA miRNA MGP_LPJ_T0090989.1 MGP_LPJ_G0034266.1 mouse_genomes_project 9 12656171 12726080 - MGP_LPJ_P0090989 Ccdc67 protein_coding protein_coding MGP_LPJ_T0090990.1 MGP_LPJ_G0034266.1 mouse_genomes_project 9 12656177 12728692 - MGP_LPJ_P0090990 Ccdc67 protein_coding protein_coding MGP_LPJ_T0090991.1 MGP_LPJ_G0034266.1 mouse_genomes_project 9 12656867 12728662 - MGP_LPJ_P0090991 Ccdc67 protein_coding protein_coding MGP_LPJ_T0090992.1 MGP_LPJ_G0034266.1 mouse_genomes_project 9 12671697 12684561 - Ccdc67 protein_coding processed_transcript MGP_LPJ_T0090993.1 MGP_LPJ_G0034266.1 mouse_genomes_project 9 12680601 12728673 - MGP_LPJ_P0090993 Ccdc67 protein_coding protein_coding MGP_LPJ_T0092296.1 MGP_LPJ_G0034776.1 mouse_genomes_project 9 57457229 57476505 + MGP_LPJ_P0092296 Ubl7 protein_coding protein_coding MGP_LPJ_T0090894.1 MGP_LPJ_G0034238.1 mouse_genomes_project 9 6605790 7899940 - MGP_LPJ_P0090894 Cntn5 protein_coding protein_coding MGP_LPJ_T0090895.1 MGP_LPJ_G0034238.1 mouse_genomes_project 9 6605868 7899989 - MGP_LPJ_P0090895 Cntn5 protein_coding protein_coding MGP_LPJ_T0090896.1 MGP_LPJ_G0034238.1 mouse_genomes_project 9 6606262 7399259 - MGP_LPJ_P0090896 Cntn5 protein_coding protein_coding MGP_LPJ_T0090897.1 MGP_LPJ_G0034238.1 mouse_genomes_project 9 6606262 7399259 - MGP_LPJ_P0090897 Cntn5 protein_coding protein_coding MGP_LPJ_T0090898.1 MGP_LPJ_G0034238.1 mouse_genomes_project 9 7621964 7899663 - Cntn5 protein_coding retained_intron MGP_LPJ_T0093158.1 MGP_LPJ_G0034980.1 mouse_genomes_project 9 84426849 84523551 + MGP_LPJ_P0093158 Sh3bgrl2 protein_coding protein_coding MGP_LPJ_T0093159.1 MGP_LPJ_G0034980.1 mouse_genomes_project 9 84426851 84427534 + Sh3bgrl2 protein_coding retained_intron MGP_LPJ_T0093160.1 MGP_LPJ_G0034980.1 mouse_genomes_project 9 84426872 84523050 + MGP_LPJ_P0093160 Sh3bgrl2 protein_coding protein_coding MGP_LPJ_T0093161.1 MGP_LPJ_G0034980.1 mouse_genomes_project 9 84426981 84482210 + MGP_LPJ_P0093161 Sh3bgrl2 protein_coding protein_coding MGP_LPJ_T0091513.1 MGP_LPJ_G0034465.1 mouse_genomes_project 9 35703433 35713724 + MGP_LPJ_P0091513 Esam protein_coding protein_coding MGP_LPJ_T0091514.1 MGP_LPJ_G0034465.1 mouse_genomes_project 9 35704136 35712550 + MGP_LPJ_P0091514 Esam protein_coding protein_coding MGP_LPJ_T0091515.1 MGP_LPJ_G0034465.1 mouse_genomes_project 9 35705614 35707022 + MGP_LPJ_P0091515 Esam protein_coding protein_coding MGP_LPJ_T0091516.1 MGP_LPJ_G0034465.1 mouse_genomes_project 9 35706289 35709638 + MGP_LPJ_P0091516 Esam protein_coding protein_coding MGP_LPJ_T0091517.1 MGP_LPJ_G0034465.1 mouse_genomes_project 9 35711687 35712897 + Esam protein_coding retained_intron MGP_LPJ_T0101424.1 MGP_LPJ_G0039594.1 mouse_genomes_project 9 112233489 112240778 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0009285.1 MGP_LPJ_G0007461.1 mouse_genomes_project 9 73628042 73710759 + Gm27211 lincRNA lincRNA MGP_LPJ_T0091775.1 MGP_LPJ_G0034608.1 mouse_genomes_project 9 43307883 43323147 - MGP_LPJ_P0091775 Cxcr5 protein_coding protein_coding MGP_LPJ_T0091776.1 MGP_LPJ_G0034608.1 mouse_genomes_project 9 43307883 43358479 - MGP_LPJ_P0091776 Cxcr5 protein_coding protein_coding MGP_LPJ_T0016120.1 MGP_LPJ_G0014211.1 mouse_genomes_project 9 112386992 112387745 + processed_pseudogene processed_pseudogene MGP_LPJ_T0093474.1 MGP_LPJ_G0035042.1 mouse_genomes_project 9 98573844 98611486 - MGP_LPJ_P0093474 Slc25a36 protein_coding protein_coding MGP_LPJ_T0093475.1 MGP_LPJ_G0035042.1 mouse_genomes_project 9 98574448 98583094 - MGP_LPJ_P0093475 Slc25a36 protein_coding protein_coding MGP_LPJ_T0093476.1 MGP_LPJ_G0035042.1 mouse_genomes_project 9 98578086 98583880 - Slc25a36 protein_coding retained_intron MGP_LPJ_T0093477.1 MGP_LPJ_G0035042.1 mouse_genomes_project 9 98579087 98588568 - Slc25a36 protein_coding processed_transcript MGP_LPJ_T0093478.1 MGP_LPJ_G0035042.1 mouse_genomes_project 9 98579253 98588685 - Slc25a36 protein_coding processed_transcript MGP_LPJ_T0093479.1 MGP_LPJ_G0035042.1 mouse_genomes_project 9 98588242 98598745 - MGP_LPJ_P0093479 Slc25a36 protein_coding protein_coding MGP_LPJ_T0093480.1 MGP_LPJ_G0035042.1 mouse_genomes_project 9 98591337 98611316 - Slc25a36 protein_coding retained_intron MGP_LPJ_T0093481.1 MGP_LPJ_G0035042.1 mouse_genomes_project 9 98597827 98611362 - Slc25a36 protein_coding retained_intron MGP_LPJ_T0098693.1 MGP_LPJ_G0036961.1 mouse_genomes_project 9 118019583 118024687 + Gm27002 sense_intronic sense_intronic MGP_LPJ_T0011054.1 MGP_LPJ_G0009172.1 mouse_genomes_project 9 1216479 1216563 - Gm23811 miRNA miRNA MGP_LPJ_T0091088.1 MGP_LPJ_G0034321.1 mouse_genomes_project 9 17973136 17977034 + Ubl5 protein_coding retained_intron MGP_LPJ_T0091089.1 MGP_LPJ_G0034321.1 mouse_genomes_project 9 17973576 17977223 + MGP_LPJ_P0091089 Ubl5 protein_coding protein_coding MGP_LPJ_T0091090.1 MGP_LPJ_G0034321.1 mouse_genomes_project 9 17974329 17977036 + MGP_LPJ_P0091090 Ubl5 protein_coding protein_coding MGP_LPJ_T0091091.1 MGP_LPJ_G0034321.1 mouse_genomes_project 9 17974598 17975908 + MGP_LPJ_P0091091 Ubl5 protein_coding protein_coding MGP_LPJ_T0091092.1 MGP_LPJ_G0034321.1 mouse_genomes_project 9 17975079 17977034 + MGP_LPJ_P0091092 Ubl5 protein_coding protein_coding MGP_LPJ_T0091093.1 MGP_LPJ_G0034321.1 mouse_genomes_project 9 17975092 17976165 + Ubl5 protein_coding retained_intron MGP_LPJ_T0091094.1 MGP_LPJ_G0034321.1 mouse_genomes_project 9 17975092 17977399 + MGP_LPJ_P0091094 Ubl5 protein_coding protein_coding MGP_LPJ_T0091095.1 MGP_LPJ_G0034321.1 mouse_genomes_project 9 17975093 17977034 + MGP_LPJ_P0091095 Ubl5 protein_coding nonsense_mediated_decay MGP_LPJ_T0091096.1 MGP_LPJ_G0034321.1 mouse_genomes_project 9 17975126 17977028 + MGP_LPJ_P0091096 Ubl5 protein_coding protein_coding MGP_LPJ_T0091097.1 MGP_LPJ_G0034321.1 mouse_genomes_project 9 17975299 17977034 + MGP_LPJ_P0091097 Ubl5 protein_coding protein_coding MGP_LPJ_T0091098.1 MGP_LPJ_G0034321.1 mouse_genomes_project 9 17975476 17977035 + MGP_LPJ_P0091098 Ubl5 protein_coding protein_coding MGP_LPJ_T0093911.1 MGP_LPJ_G0035131.1 mouse_genomes_project 9 108718982 108832487 - MGP_LPJ_P0093911 Rad54l2 protein_coding protein_coding MGP_LPJ_T0093912.1 MGP_LPJ_G0035131.1 mouse_genomes_project 9 108719689 108724177 - MGP_LPJ_P0093912 Rad54l2 protein_coding protein_coding MGP_LPJ_T0093913.1 MGP_LPJ_G0035131.1 mouse_genomes_project 9 108757639 108758577 - MGP_LPJ_P0093913 Rad54l2 protein_coding protein_coding MGP_LPJ_T0093914.1 MGP_LPJ_G0035131.1 mouse_genomes_project 9 108830355 108832469 - Rad54l2 protein_coding retained_intron MGP_LPJ_T0018453.1 MGP_LPJ_G0015650.1 mouse_genomes_project 9 33169054 33183270 + 4930581F22Rik processed_transcript processed_transcript MGP_LPJ_T0018454.1 MGP_LPJ_G0015650.1 mouse_genomes_project 9 33169093 33170592 + 4930581F22Rik processed_transcript processed_transcript MGP_LPJ_T0018455.1 MGP_LPJ_G0015650.1 mouse_genomes_project 9 33169736 33175985 + 4930581F22Rik processed_transcript processed_transcript MGP_LPJ_T0018456.1 MGP_LPJ_G0015650.1 mouse_genomes_project 9 33170303 33178738 + 4930581F22Rik processed_transcript processed_transcript MGP_LPJ_T0018457.1 MGP_LPJ_G0015650.1 mouse_genomes_project 9 33170387 33176413 + 4930581F22Rik processed_transcript processed_transcript MGP_LPJ_T0018458.1 MGP_LPJ_G0015650.1 mouse_genomes_project 9 33170517 33179246 + 4930581F22Rik processed_transcript processed_transcript MGP_LPJ_T0094677.1 MGP_LPJ_G0035249.1 mouse_genomes_project 9 113320003 113335521 + MGP_LPJ_P0094677 Prss46 protein_coding protein_coding MGP_LPJ_T0094678.1 MGP_LPJ_G0035249.1 mouse_genomes_project 9 113327351 113335515 + MGP_LPJ_P0094678 Prss46 protein_coding protein_coding MGP_LPJ_T0092711.1 MGP_LPJ_G0034882.1 mouse_genomes_project 9 67943398 67944892 + MGP_LPJ_P0092711 C2cd4b protein_coding protein_coding MGP_LPJ_T0009306.1 MGP_LPJ_G0007479.1 mouse_genomes_project 9 90980509 91018020 + 4930524O08Rik lincRNA lincRNA MGP_LPJ_T0009307.1 MGP_LPJ_G0007479.1 mouse_genomes_project 9 90980934 90992953 + 4930524O08Rik lincRNA lincRNA MGP_LPJ_T0009308.1 MGP_LPJ_G0007479.1 mouse_genomes_project 9 90980972 90992295 + 4930524O08Rik lincRNA lincRNA MGP_LPJ_T0094961.1 MGP_LPJ_G0035328.1 mouse_genomes_project 9 123783503 123784230 + MGP_LPJ_P0094961 5830454E08Rik protein_coding protein_coding MGP_LPJ_T0002401.1 MGP_LPJ_G0002308.1 mouse_genomes_project 9 73083988 73085471 + TEC TEC MGP_LPJ_T0093800.1 MGP_LPJ_G0035109.1 mouse_genomes_project 9 108155012 108160305 - MGP_LPJ_P0093800 protein_coding protein_coding MGP_LPJ_T0093801.1 MGP_LPJ_G0035109.1 mouse_genomes_project 9 108155024 108160325 - MGP_LPJ_P0093801 protein_coding protein_coding MGP_LPJ_T0093802.1 MGP_LPJ_G0035109.1 mouse_genomes_project 9 108159476 108160304 - MGP_LPJ_P0093802 protein_coding protein_coding MGP_LPJ_T0093803.1 MGP_LPJ_G0035109.1 mouse_genomes_project 9 108159775 108160297 - MGP_LPJ_P0093803 protein_coding protein_coding MGP_LPJ_T0091625.1 MGP_LPJ_G0034555.1 mouse_genomes_project 9 38568980 38570522 - MGP_LPJ_P0091625 Olfr983 protein_coding protein_coding MGP_LPJ_T0005531.1 MGP_LPJ_G0004669.1 mouse_genomes_project 9 98177878 98183501 + A930006L05Rik antisense antisense MGP_LPJ_T0091818.1 MGP_LPJ_G0034616.1 mouse_genomes_project 9 43632848 43710735 - MGP_LPJ_P0091818 Kmt2a protein_coding unknown_likely_coding MGP_LPJ_T0091819.1 MGP_LPJ_G0034616.1 mouse_genomes_project 9 43632849 43710757 - MGP_LPJ_P0091819 Kmt2a protein_coding protein_coding MGP_LPJ_T0091820.1 MGP_LPJ_G0034616.1 mouse_genomes_project 9 43632849 43710735 - MGP_LPJ_P0091820 Kmt2a protein_coding protein_coding MGP_LPJ_T0091821.1 MGP_LPJ_G0034616.1 mouse_genomes_project 9 43644083 43649525 - MGP_LPJ_P0091821 Kmt2a protein_coding nonsense_mediated_decay MGP_LPJ_T0091822.1 MGP_LPJ_G0034616.1 mouse_genomes_project 9 43652144 43676642 - MGP_LPJ_P0091822 Kmt2a protein_coding nonsense_mediated_decay MGP_LPJ_T0091823.1 MGP_LPJ_G0034616.1 mouse_genomes_project 9 43670039 43710757 - MGP_LPJ_P0091823 Kmt2a protein_coding protein_coding MGP_LPJ_T0094509.1 MGP_LPJ_G0035222.1 mouse_genomes_project 9 111841249 111999454 - MGP_LPJ_P0094509 protein_coding protein_coding MGP_LPJ_T0016032.1 MGP_LPJ_G0014123.1 mouse_genomes_project 9 77390508 77391406 - processed_pseudogene processed_pseudogene MGP_LPJ_T0090903.1 MGP_LPJ_G0034242.1 mouse_genomes_project 9 10387483 10388859 + MGP_LPJ_P0090903 Phxr4 protein_coding protein_coding MGP_LPJ_T0092079.1 MGP_LPJ_G0034698.1 mouse_genomes_project 9 51241477 51263955 - MGP_LPJ_P0092079 Fdx1 protein_coding protein_coding MGP_LPJ_T0101104.1 MGP_LPJ_G0039367.1 mouse_genomes_project 9 64110307 64110375 + Gm23344 snoRNA snoRNA MGP_LPJ_T0090900.1 MGP_LPJ_G0034240.1 mouse_genomes_project 9 10298109 10337935 + MGP_LPJ_P0090900 Ccdc82 protein_coding protein_coding MGP_LPJ_T0090901.1 MGP_LPJ_G0034240.1 mouse_genomes_project 9 10298122 10304680 + MGP_LPJ_P0090901 Ccdc82 protein_coding protein_coding MGP_LPJ_T0009228.1 MGP_LPJ_G0007415.1 mouse_genomes_project 9 22744539 22766095 + Gm29642 lincRNA lincRNA MGP_LPJ_T0092001.1 MGP_LPJ_G0034680.1 mouse_genomes_project 9 49888858 49915245 - MGP_LPJ_P0092001 Dlat protein_coding protein_coding MGP_LPJ_T0092002.1 MGP_LPJ_G0034680.1 mouse_genomes_project 9 49890750 49899795 - Dlat protein_coding retained_intron MGP_LPJ_T0092003.1 MGP_LPJ_G0034680.1 mouse_genomes_project 9 49891682 49901624 - Dlat protein_coding processed_transcript MGP_LPJ_T0092004.1 MGP_LPJ_G0034680.1 mouse_genomes_project 9 49895301 49899496 - Dlat protein_coding retained_intron MGP_LPJ_T0092005.1 MGP_LPJ_G0034680.1 mouse_genomes_project 9 49895619 49903147 - Dlat protein_coding processed_transcript MGP_LPJ_T0092006.1 MGP_LPJ_G0034680.1 mouse_genomes_project 9 49899466 49905383 - Dlat protein_coding retained_intron MGP_LPJ_T0005449.1 MGP_LPJ_G0004616.1 mouse_genomes_project 9 26787751 26798153 + Gm15520 antisense antisense MGP_LPJ_T0101091.1 MGP_LPJ_G0039354.1 mouse_genomes_project 9 35354715 35354830 - Gm25273 snoRNA snoRNA MGP_LPJ_T0011111.1 MGP_LPJ_G0009229.1 mouse_genomes_project 9 108185807 108185895 + Mirlet7g miRNA miRNA MGP_LPJ_T0094896.1 MGP_LPJ_G0035302.1 mouse_genomes_project 9 122229238 122231717 + MGP_LPJ_P0094896 Gm10608 protein_coding protein_coding MGP_LPJ_T0018548.1 MGP_LPJ_G0015683.1 mouse_genomes_project 9 125705988 125723933 - A730085K08Rik processed_transcript processed_transcript MGP_LPJ_T0091446.1 MGP_LPJ_G0034450.1 mouse_genomes_project 9 34741915 34750509 - MGP_LPJ_P0091446 Gm5615 protein_coding protein_coding MGP_LPJ_T0093502.1 MGP_LPJ_G0035050.1 mouse_genomes_project 9 100147349 100160349 - MGP_LPJ_P0093502 Mrps22 protein_coding protein_coding MGP_LPJ_T0093503.1 MGP_LPJ_G0035050.1 mouse_genomes_project 9 100153801 100160334 - Mrps22 protein_coding retained_intron MGP_LPJ_T0101076.1 MGP_LPJ_G0039339.1 mouse_genomes_project 9 12399857 12399990 + Gm22620 snoRNA snoRNA MGP_LPJ_T0092068.1 MGP_LPJ_G0034693.1 mouse_genomes_project 9 50501659 50529102 + MGP_LPJ_P0092068 Pou2af1 protein_coding protein_coding MGP_LPJ_T0011079.1 MGP_LPJ_G0009197.1 mouse_genomes_project 9 44126946 44127011 - Mir7086 miRNA miRNA MGP_LPJ_T0101142.1 MGP_LPJ_G0039405.1 mouse_genomes_project 9 122412473 122412602 - Gm22729 snoRNA snoRNA MGP_LPJ_T0002424.1 MGP_LPJ_G0002330.1 mouse_genomes_project 9 87741548 87742707 - TEC TEC MGP_LPJ_T0093041.1 MGP_LPJ_G0034954.1 mouse_genomes_project 9 78887951 78905303 + MGP_LPJ_P0093041 Gsta4 protein_coding protein_coding MGP_LPJ_T0093026.1 MGP_LPJ_G0034951.1 mouse_genomes_project 9 78750888 78764145 + MGP_LPJ_P0093026 Gcm1 protein_coding protein_coding MGP_LPJ_T0101073.1 MGP_LPJ_G0039336.1 mouse_genomes_project 9 12398470 12398601 + Gm24455 snoRNA snoRNA MGP_LPJ_T0016059.1 MGP_LPJ_G0014150.1 mouse_genomes_project 9 89201440 89202911 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101093.1 MGP_LPJ_G0039356.1 mouse_genomes_project 9 37897016 37897143 - Gm24278 snoRNA snoRNA MGP_LPJ_T0094349.1 MGP_LPJ_G0035194.1 mouse_genomes_project 9 110731801 110734690 + MGP_LPJ_P0094349 Dalrd3 protein_coding protein_coding MGP_LPJ_T0094350.1 MGP_LPJ_G0035194.1 mouse_genomes_project 9 110731825 110733435 + MGP_LPJ_P0094350 Dalrd3 protein_coding nonsense_mediated_decay MGP_LPJ_T0094351.1 MGP_LPJ_G0035194.1 mouse_genomes_project 9 110731829 110732602 + Dalrd3 protein_coding retained_intron MGP_LPJ_T0094352.1 MGP_LPJ_G0035194.1 mouse_genomes_project 9 110732611 110733897 + Dalrd3 protein_coding retained_intron MGP_LPJ_T0094353.1 MGP_LPJ_G0035194.1 mouse_genomes_project 9 110732922 110733756 + Dalrd3 protein_coding retained_intron MGP_LPJ_T0094354.1 MGP_LPJ_G0035194.1 mouse_genomes_project 9 110733152 110734689 + Dalrd3 protein_coding retained_intron MGP_LPJ_T0094355.1 MGP_LPJ_G0035194.1 mouse_genomes_project 9 110733433 110734447 + MGP_LPJ_P0094355 Dalrd3 protein_coding protein_coding MGP_LPJ_T0094356.1 MGP_LPJ_G0035194.1 mouse_genomes_project 9 110734182 110734687 + Dalrd3 protein_coding retained_intron MGP_LPJ_T0094358.1 MGP_LPJ_G0035194.1 mouse_genomes_project 9 110734307 110734571 + MGP_LPJ_P0094358 Dalrd3 protein_coding protein_coding MGP_LPJ_T0090998.1 MGP_LPJ_G0034270.1 mouse_genomes_project 9 14210839 14211592 + MGP_LPJ_P0090998 Gm5611 protein_coding protein_coding MGP_LPJ_T0094202.1 MGP_LPJ_G0035172.1 mouse_genomes_project 9 110170052 110172600 + MGP_LPJ_P0094202 Amigo3 protein_coding protein_coding MGP_LPJ_T0090994.1 MGP_LPJ_G0034267.1 mouse_genomes_project 9 12817262 12850739 + MGP_LPJ_P0090994 Slc36a4 protein_coding protein_coding MGP_LPJ_T0011764.1 MGP_LPJ_G0009882.1 mouse_genomes_project 9 121294593 121294900 + Gm22198 misc_RNA misc_RNA MGP_LPJ_T0005448.1 MGP_LPJ_G0004615.1 mouse_genomes_project 9 21900894 21979351 + Gm10701 antisense antisense MGP_LPJ_T0011074.1 MGP_LPJ_G0009192.1 mouse_genomes_project 9 40096025 40096121 + Mirlet7a-2 miRNA miRNA MGP_LPJ_T0092346.1 MGP_LPJ_G0034787.1 mouse_genomes_project 9 58064841 58075949 + MGP_LPJ_P0092346 6030419C18Rik protein_coding protein_coding MGP_LPJ_T0091274.1 MGP_LPJ_G0034397.1 mouse_genomes_project 9 24372289 24399941 + MGP_LPJ_P0091274 B3gat1 protein_coding protein_coding MGP_LPJ_T0091275.1 MGP_LPJ_G0034397.1 mouse_genomes_project 9 24372364 24394647 + MGP_LPJ_P0091275 B3gat1 protein_coding protein_coding MGP_LPJ_T0091276.1 MGP_LPJ_G0034397.1 mouse_genomes_project 9 24372385 24401685 + MGP_LPJ_P0091276 B3gat1 protein_coding protein_coding MGP_LPJ_T0091277.1 MGP_LPJ_G0034397.1 mouse_genomes_project 9 24372412 24396550 + MGP_LPJ_P0091277 B3gat1 protein_coding protein_coding MGP_LPJ_T0091278.1 MGP_LPJ_G0034397.1 mouse_genomes_project 9 24390129 24399929 + MGP_LPJ_P0091278 B3gat1 protein_coding protein_coding MGP_LPJ_T0091279.1 MGP_LPJ_G0034397.1 mouse_genomes_project 9 24393851 24401691 + MGP_LPJ_P0091279 B3gat1 protein_coding protein_coding MGP_LPJ_T0005489.1 MGP_LPJ_G0004643.1 mouse_genomes_project 9 66944121 66948319 - BC050972 antisense antisense MGP_LPJ_T0005490.1 MGP_LPJ_G0004643.1 mouse_genomes_project 9 66944354 66948019 - BC050972 antisense antisense MGP_LPJ_T0005491.1 MGP_LPJ_G0004643.1 mouse_genomes_project 9 66944383 66949821 - BC050972 antisense antisense MGP_LPJ_T0016083.1 MGP_LPJ_G0014174.1 mouse_genomes_project 9 97718789 97719030 - processed_pseudogene processed_pseudogene MGP_LPJ_T0094810.1 MGP_LPJ_G0035275.1 mouse_genomes_project 9 117174843 117253518 + MGP_LPJ_P0094810 Glb1 protein_coding protein_coding MGP_LPJ_T0091436.1 MGP_LPJ_G0034441.1 mouse_genomes_project 9 33812278 33813484 + MGP_LPJ_P0091436 Gm17677 protein_coding protein_coding MGP_LPJ_T0094814.1 MGP_LPJ_G0035279.1 mouse_genomes_project 9 117297233 117297961 + MGP_LPJ_P0094814 protein_coding protein_coding MGP_LPJ_T0093647.1 MGP_LPJ_G0035082.1 mouse_genomes_project 9 104920906 104975503 + Rab6b protein_coding processed_transcript MGP_LPJ_T0093648.1 MGP_LPJ_G0035082.1 mouse_genomes_project 9 104920926 104998131 + MGP_LPJ_P0093648 Rab6b protein_coding protein_coding MGP_LPJ_T0101102.1 MGP_LPJ_G0039365.1 mouse_genomes_project 9 52973901 52974030 + Gm22304 snoRNA snoRNA MGP_LPJ_T0018492.1 MGP_LPJ_G0015661.1 mouse_genomes_project 9 72757308 72765867 + Gm27230 processed_transcript lincRNA MGP_LPJ_T0018493.1 MGP_LPJ_G0015661.1 mouse_genomes_project 9 72757314 72764106 + Gm27230 processed_transcript lincRNA MGP_LPJ_T0018494.1 MGP_LPJ_G0015661.1 mouse_genomes_project 9 72764774 72765448 + Gm27230 processed_transcript retained_intron MGP_LPJ_T0002394.1 MGP_LPJ_G0002301.1 mouse_genomes_project 9 72387019 72389692 - TEC TEC MGP_LPJ_T0095030.1 MGP_LPJ_G0035347.1 mouse_genomes_project 9 125289799 125304898 - MGP_LPJ_P0095030 Pomgnt2 protein_coding protein_coding MGP_LPJ_T0011130.1 MGP_LPJ_G0009248.1 mouse_genomes_project 9 125596760 125596899 - Mir8106 miRNA miRNA MGP_LPJ_T0091544.1 MGP_LPJ_G0034486.1 mouse_genomes_project 9 36398990 36399941 - MGP_LPJ_P0091544 Olfr891 protein_coding protein_coding MGP_LPJ_T0091755.1 MGP_LPJ_G0034597.1 mouse_genomes_project 9 43116672 43119375 + MGP_LPJ_P0091755 H2afx protein_coding protein_coding MGP_LPJ_T0092022.1 MGP_LPJ_G0034684.1 mouse_genomes_project 9 50010178 50014073 + MGP_LPJ_P0092022 Cryab protein_coding protein_coding MGP_LPJ_T0090995.1 MGP_LPJ_G0034268.1 mouse_genomes_project 9 12931978 13002866 - MGP_LPJ_P0090995 Mtnr1b protein_coding nonsense_mediated_decay MGP_LPJ_T0090996.1 MGP_LPJ_G0034268.1 mouse_genomes_project 9 12987432 13002770 - MGP_LPJ_P0090996 Mtnr1b protein_coding protein_coding MGP_LPJ_T0015979.1 MGP_LPJ_G0014070.1 mouse_genomes_project 9 20196730 20197198 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009260.1 MGP_LPJ_G0007441.1 mouse_genomes_project 9 56042527 56050326 + Gm26868 lincRNA lincRNA MGP_LPJ_T0018486.1 MGP_LPJ_G0015658.1 mouse_genomes_project 9 63276533 63377326 + Gm16759 processed_transcript lincRNA MGP_LPJ_T0018487.1 MGP_LPJ_G0015658.1 mouse_genomes_project 9 63277306 63453321 + Gm16759 processed_transcript lincRNA MGP_LPJ_T0018488.1 MGP_LPJ_G0015658.1 mouse_genomes_project 9 63277313 63304981 + Gm16759 processed_transcript lincRNA MGP_LPJ_T0018489.1 MGP_LPJ_G0015658.1 mouse_genomes_project 9 63415449 63451616 + Gm16759 processed_transcript processed_transcript MGP_LPJ_T0092333.1 MGP_LPJ_G0034783.1 mouse_genomes_project 9 57780943 57813906 - MGP_LPJ_P0092333 Pml protein_coding protein_coding MGP_LPJ_T0092334.1 MGP_LPJ_G0034783.1 mouse_genomes_project 9 57781409 57796088 - Pml protein_coding retained_intron MGP_LPJ_T0092335.1 MGP_LPJ_G0034783.1 mouse_genomes_project 9 57782618 57813780 - MGP_LPJ_P0092335 Pml protein_coding protein_coding MGP_LPJ_T0092336.1 MGP_LPJ_G0034783.1 mouse_genomes_project 9 57782670 57813810 - MGP_LPJ_P0092336 Pml protein_coding protein_coding MGP_LPJ_T0092337.1 MGP_LPJ_G0034783.1 mouse_genomes_project 9 57783130 57792830 - Pml protein_coding processed_transcript MGP_LPJ_T0092338.1 MGP_LPJ_G0034783.1 mouse_genomes_project 9 57783905 57813906 - MGP_LPJ_P0092338 Pml protein_coding protein_coding MGP_LPJ_T0092339.1 MGP_LPJ_G0034783.1 mouse_genomes_project 9 57792550 57813906 - MGP_LPJ_P0092339 Pml protein_coding nonsense_mediated_decay MGP_LPJ_T0092340.1 MGP_LPJ_G0034783.1 mouse_genomes_project 9 57793093 57796098 - Pml protein_coding retained_intron MGP_LPJ_T0092341.1 MGP_LPJ_G0034783.1 mouse_genomes_project 9 57811192 57813743 - MGP_LPJ_P0092341 Pml protein_coding nonsense_mediated_decay MGP_LPJ_T0092342.1 MGP_LPJ_G0034783.1 mouse_genomes_project 9 57811237 57813906 - MGP_LPJ_P0092342 Pml protein_coding protein_coding MGP_LPJ_T0091119.1 MGP_LPJ_G0034331.1 mouse_genomes_project 9 18316235 18327076 - MGP_LPJ_P0091119 S1pr2 protein_coding protein_coding MGP_LPJ_T0093997.1 MGP_LPJ_G0035146.1 mouse_genomes_project 9 109644860 109647721 + MGP_LPJ_P0093997 Tusc2 protein_coding protein_coding MGP_LPJ_T0093998.1 MGP_LPJ_G0035146.1 mouse_genomes_project 9 109644959 109645557 + Tusc2 protein_coding processed_transcript MGP_LPJ_T0093999.1 MGP_LPJ_G0035146.1 mouse_genomes_project 9 109644978 109646604 + MGP_LPJ_P0093999 Tusc2 protein_coding protein_coding MGP_LPJ_T0093643.1 MGP_LPJ_G0035081.1 mouse_genomes_project 9 104790188 104823939 + Slco2a1 protein_coding processed_transcript MGP_LPJ_T0093644.1 MGP_LPJ_G0035081.1 mouse_genomes_project 9 104811178 104897478 + MGP_LPJ_P0093644 Slco2a1 protein_coding protein_coding MGP_LPJ_T0093645.1 MGP_LPJ_G0035081.1 mouse_genomes_project 9 104811330 104815067 + Slco2a1 protein_coding retained_intron MGP_LPJ_T0093646.1 MGP_LPJ_G0035081.1 mouse_genomes_project 9 104811675 104902891 + MGP_LPJ_P0093646 Slco2a1 protein_coding nonsense_mediated_decay MGP_LPJ_T0000382.1 MGP_LPJ_G0000320.1 mouse_genomes_project 9 126465551 126465620 + mt-Ta Mt_tRNA Mt_tRNA MGP_LPJ_T0002426.1 MGP_LPJ_G0002332.1 mouse_genomes_project 9 87854705 87857016 - TEC TEC MGP_LPJ_T0093609.1 MGP_LPJ_G0035076.1 mouse_genomes_project 9 104353130 104355155 - Cep63 protein_coding TEC MGP_LPJ_T0093610.1 MGP_LPJ_G0035076.1 mouse_genomes_project 9 104355126 104399575 - MGP_LPJ_P0093610 Cep63 protein_coding protein_coding MGP_LPJ_T0093611.1 MGP_LPJ_G0035076.1 mouse_genomes_project 9 104355139 104399985 - MGP_LPJ_P0093611 Cep63 protein_coding protein_coding MGP_LPJ_T0093612.1 MGP_LPJ_G0035076.1 mouse_genomes_project 9 104355235 104355718 - Cep63 protein_coding retained_intron MGP_LPJ_T0093613.1 MGP_LPJ_G0035076.1 mouse_genomes_project 9 104359094 104395383 - Cep63 protein_coding retained_intron MGP_LPJ_T0093614.1 MGP_LPJ_G0035076.1 mouse_genomes_project 9 104366922 104371453 - Cep63 protein_coding retained_intron MGP_LPJ_T0093615.1 MGP_LPJ_G0035076.1 mouse_genomes_project 9 104388730 104399474 - MGP_LPJ_P0093615 Cep63 protein_coding nonsense_mediated_decay MGP_LPJ_T0093616.1 MGP_LPJ_G0035076.1 mouse_genomes_project 9 104392238 104399960 - MGP_LPJ_P0093616 Cep63 protein_coding protein_coding MGP_LPJ_T0093617.1 MGP_LPJ_G0035076.1 mouse_genomes_project 9 104392288 104399960 - MGP_LPJ_P0093617 Cep63 protein_coding protein_coding MGP_LPJ_T0016048.1 MGP_LPJ_G0014139.1 mouse_genomes_project 9 84369433 84369839 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099806.1 MGP_LPJ_G0038069.1 mouse_genomes_project 9 15955705 15955807 + Gm24546 snRNA snRNA MGP_LPJ_T0092493.1 MGP_LPJ_G0034824.1 mouse_genomes_project 9 63034943 63255863 - MGP_LPJ_P0092493 Map2k5 protein_coding protein_coding MGP_LPJ_T0091326.1 MGP_LPJ_G0034412.1 mouse_genomes_project 9 28787220 28810788 + MGP_LPJ_P0091326 Adamts8 protein_coding protein_coding MGP_LPJ_T0091327.1 MGP_LPJ_G0034412.1 mouse_genomes_project 9 28788116 28811770 + MGP_LPJ_P0091327 Adamts8 protein_coding nonsense_mediated_decay MGP_LPJ_T0090958.1 MGP_LPJ_G0034257.1 mouse_genomes_project 9 11949710 11967784 - MGP_LPJ_P0090958 Izumo1r protein_coding protein_coding MGP_LPJ_T0090959.1 MGP_LPJ_G0034257.1 mouse_genomes_project 9 11956948 11967849 - MGP_LPJ_P0090959 Izumo1r protein_coding protein_coding MGP_LPJ_T0090960.1 MGP_LPJ_G0034257.1 mouse_genomes_project 9 11963922 11967832 - MGP_LPJ_P0090960 Izumo1r protein_coding protein_coding MGP_LPJ_T0090961.1 MGP_LPJ_G0034257.1 mouse_genomes_project 9 11963927 11967656 - MGP_LPJ_P0090961 Izumo1r protein_coding protein_coding MGP_LPJ_T0090962.1 MGP_LPJ_G0034257.1 mouse_genomes_project 9 11964669 11967654 - MGP_LPJ_P0090962 Izumo1r protein_coding protein_coding MGP_LPJ_T0011116.1 MGP_LPJ_G0009234.1 mouse_genomes_project 9 110730234 110730308 + Mir191 miRNA miRNA MGP_LPJ_T0009365.1 MGP_LPJ_G0007523.1 mouse_genomes_project 9 121973268 121974174 + Gm16295 lincRNA lincRNA MGP_LPJ_T0091778.1 MGP_LPJ_G0034610.1 mouse_genomes_project 9 43493732 43506810 + MGP_LPJ_P0091778 Treh protein_coding protein_coding MGP_LPJ_T0091779.1 MGP_LPJ_G0034610.1 mouse_genomes_project 9 43493734 43506809 + MGP_LPJ_P0091779 Treh protein_coding nonsense_mediated_decay MGP_LPJ_T0091780.1 MGP_LPJ_G0034610.1 mouse_genomes_project 9 43493748 43506810 + MGP_LPJ_P0091780 Treh protein_coding protein_coding MGP_LPJ_T0091781.1 MGP_LPJ_G0034610.1 mouse_genomes_project 9 43503803 43506521 + MGP_LPJ_P0091781 Treh protein_coding nonsense_mediated_decay MGP_LPJ_T0009280.1 MGP_LPJ_G0007456.1 mouse_genomes_project 9 70456024 70486296 - Gm26849 lincRNA lincRNA MGP_LPJ_T0018547.1 MGP_LPJ_G0015682.1 mouse_genomes_project 9 120211985 120214134 + Gm17396 processed_transcript processed_transcript MGP_LPJ_T0092888.1 MGP_LPJ_G0034915.1 mouse_genomes_project 9 73387757 73402071 + MGP_LPJ_P0092888 Dyx1c1 protein_coding protein_coding MGP_LPJ_T0092889.1 MGP_LPJ_G0034915.1 mouse_genomes_project 9 73387757 73402074 + MGP_LPJ_P0092889 Dyx1c1 protein_coding protein_coding MGP_LPJ_T0093277.1 MGP_LPJ_G0035004.1 mouse_genomes_project 9 89666991 89683228 + MGP_LPJ_P0093277 protein_coding protein_coding MGP_LPJ_T0101124.1 MGP_LPJ_G0039387.1 mouse_genomes_project 9 89101317 89101447 - Gm23176 snoRNA snoRNA MGP_LPJ_T0091612.1 MGP_LPJ_G0034542.1 mouse_genomes_project 9 38223943 38224716 + MGP_LPJ_P0091612 Olfr969 protein_coding protein_coding MGP_LPJ_T0002441.1 MGP_LPJ_G0002347.1 mouse_genomes_project 9 93803560 93807629 - TEC TEC MGP_LPJ_T0005476.1 MGP_LPJ_G0004635.1 mouse_genomes_project 9 55683632 55693996 + Peak1os antisense antisense MGP_LPJ_T0009350.1 MGP_LPJ_G0007513.1 mouse_genomes_project 9 112128299 112135521 - lincRNA lincRNA MGP_LPJ_T0009351.1 MGP_LPJ_G0007513.1 mouse_genomes_project 9 112128305 112136477 - lincRNA lincRNA MGP_LPJ_T0009352.1 MGP_LPJ_G0007513.1 mouse_genomes_project 9 112128305 112136419 - lincRNA lincRNA MGP_LPJ_T0016050.1 MGP_LPJ_G0014141.1 mouse_genomes_project 9 85931778 85934408 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005565.1 MGP_LPJ_G0004694.1 mouse_genomes_project 9 109857978 109858754 + Gm37850 antisense antisense MGP_LPJ_T0094359.1 MGP_LPJ_G0035196.1 mouse_genomes_project 9 110740801 110760970 - MGP_LPJ_P0094359 P4htm protein_coding protein_coding MGP_LPJ_T0094360.1 MGP_LPJ_G0035196.1 mouse_genomes_project 9 110741118 110741497 - P4htm protein_coding processed_transcript MGP_LPJ_T0094361.1 MGP_LPJ_G0035196.1 mouse_genomes_project 9 110742528 110745712 - P4htm protein_coding retained_intron MGP_LPJ_T0094362.1 MGP_LPJ_G0035196.1 mouse_genomes_project 9 110744326 110760879 - P4htm protein_coding retained_intron MGP_LPJ_T0094363.1 MGP_LPJ_G0035196.1 mouse_genomes_project 9 110745766 110760883 - MGP_LPJ_P0094363 P4htm protein_coding protein_coding MGP_LPJ_T0094364.1 MGP_LPJ_G0035196.1 mouse_genomes_project 9 110745766 110760649 - MGP_LPJ_P0094364 P4htm protein_coding protein_coding MGP_LPJ_T0092649.1 MGP_LPJ_G0034870.1 mouse_genomes_project 9 66219173 66348511 + MGP_LPJ_P0092649 Dapk2 protein_coding protein_coding MGP_LPJ_T0092650.1 MGP_LPJ_G0034870.1 mouse_genomes_project 9 66219185 66286373 + Dapk2 protein_coding retained_intron MGP_LPJ_T0092651.1 MGP_LPJ_G0034870.1 mouse_genomes_project 9 66285039 66345231 + MGP_LPJ_P0092651 Dapk2 protein_coding nonsense_mediated_decay MGP_LPJ_T0092652.1 MGP_LPJ_G0034870.1 mouse_genomes_project 9 66344665 66347984 + Dapk2 protein_coding retained_intron MGP_LPJ_T0018483.1 MGP_LPJ_G0015657.1 mouse_genomes_project 9 59639600 59644819 - Gm15507 processed_transcript processed_transcript MGP_LPJ_T0018484.1 MGP_LPJ_G0015657.1 mouse_genomes_project 9 59639802 59644819 - Gm15507 processed_transcript processed_transcript MGP_LPJ_T0018485.1 MGP_LPJ_G0015657.1 mouse_genomes_project 9 59642685 59644849 - Gm15507 processed_transcript processed_transcript MGP_LPJ_T0093668.1 MGP_LPJ_G0035087.1 mouse_genomes_project 9 105124628 105170227 + MGP_LPJ_P0093668 Topbp1 protein_coding protein_coding MGP_LPJ_T0093669.1 MGP_LPJ_G0035087.1 mouse_genomes_project 9 105124644 105125405 + Topbp1 protein_coding retained_intron MGP_LPJ_T0093670.1 MGP_LPJ_G0035087.1 mouse_genomes_project 9 105124916 105130940 + MGP_LPJ_P0093670 Topbp1 protein_coding protein_coding MGP_LPJ_T0093671.1 MGP_LPJ_G0035087.1 mouse_genomes_project 9 105148087 105157194 + Topbp1 protein_coding retained_intron MGP_LPJ_T0093672.1 MGP_LPJ_G0035087.1 mouse_genomes_project 9 105148113 105149916 + Topbp1 protein_coding retained_intron MGP_LPJ_T0093673.1 MGP_LPJ_G0035087.1 mouse_genomes_project 9 105152997 105161959 + MGP_LPJ_P0093673 Topbp1 protein_coding protein_coding MGP_LPJ_T0093674.1 MGP_LPJ_G0035087.1 mouse_genomes_project 9 105163550 105166643 + MGP_LPJ_P0093674 Topbp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0093675.1 MGP_LPJ_G0035087.1 mouse_genomes_project 9 105163851 105164600 + Topbp1 protein_coding retained_intron MGP_LPJ_T0093676.1 MGP_LPJ_G0035087.1 mouse_genomes_project 9 105165520 105167004 + Topbp1 protein_coding retained_intron MGP_LPJ_T0093677.1 MGP_LPJ_G0035087.1 mouse_genomes_project 9 105166141 105169700 + Topbp1 protein_coding retained_intron MGP_LPJ_T0005503.1 MGP_LPJ_G0004653.1 mouse_genomes_project 9 76920534 76921804 + Gm27234 antisense antisense MGP_LPJ_T0092103.1 MGP_LPJ_G0034709.1 mouse_genomes_project 9 52948845 53001937 - MGP_LPJ_P0092103 Cul5 protein_coding protein_coding MGP_LPJ_T0092104.1 MGP_LPJ_G0034709.1 mouse_genomes_project 9 52948845 53004444 - MGP_LPJ_P0092104 Cul5 protein_coding protein_coding MGP_LPJ_T0092105.1 MGP_LPJ_G0034709.1 mouse_genomes_project 9 52950863 52956296 - Cul5 protein_coding retained_intron MGP_LPJ_T0092106.1 MGP_LPJ_G0034709.1 mouse_genomes_project 9 52951287 53001941 - MGP_LPJ_P0092106 Cul5 protein_coding protein_coding MGP_LPJ_T0092107.1 MGP_LPJ_G0034709.1 mouse_genomes_project 9 52963167 52981244 - Cul5 protein_coding retained_intron MGP_LPJ_T0092108.1 MGP_LPJ_G0034709.1 mouse_genomes_project 9 52967857 53001917 - Cul5 protein_coding retained_intron MGP_LPJ_T0092109.1 MGP_LPJ_G0034709.1 mouse_genomes_project 9 52976576 52981340 - Cul5 protein_coding retained_intron MGP_LPJ_T0092110.1 MGP_LPJ_G0034709.1 mouse_genomes_project 9 52981098 52992244 - Cul5 protein_coding processed_transcript MGP_LPJ_T0092111.1 MGP_LPJ_G0034709.1 mouse_genomes_project 9 52988915 53001502 - MGP_LPJ_P0092111 Cul5 protein_coding nonsense_mediated_decay MGP_LPJ_T0005545.1 MGP_LPJ_G0004681.1 mouse_genomes_project 9 107421732 107431379 + Gm19667 antisense antisense MGP_LPJ_T0011115.1 MGP_LPJ_G0009233.1 mouse_genomes_project 9 110730210 110730330 - Gm24083 miRNA miRNA MGP_LPJ_T0016051.1 MGP_LPJ_G0014142.1 mouse_genomes_project 9 86064883 86065328 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095114.1 MGP_LPJ_G0035379.1 mouse_genomes_project 9 127606981 127620605 + MGP_LPJ_P0095114 Ccr2 protein_coding protein_coding MGP_LPJ_T0095115.1 MGP_LPJ_G0035379.1 mouse_genomes_project 9 127607178 127616184 + MGP_LPJ_P0095115 Ccr2 protein_coding protein_coding MGP_LPJ_T0095116.1 MGP_LPJ_G0035379.1 mouse_genomes_project 9 127607203 127615594 + MGP_LPJ_P0095116 Ccr2 protein_coding protein_coding MGP_LPJ_T0095117.1 MGP_LPJ_G0035379.1 mouse_genomes_project 9 127612677 127616184 + MGP_LPJ_P0095117 Ccr2 protein_coding protein_coding MGP_LPJ_T0002456.1 MGP_LPJ_G0002362.1 mouse_genomes_project 9 102791323 102792925 + TEC TEC MGP_LPJ_T0091422.1 MGP_LPJ_G0034434.1 mouse_genomes_project 9 33594613 33616385 - MGP_LPJ_P0091422 Ddx25 protein_coding protein_coding MGP_LPJ_T0091117.1 MGP_LPJ_G0034329.1 mouse_genomes_project 9 18242927 18247176 - MGP_LPJ_P0091117 Eif3g protein_coding protein_coding MGP_LPJ_T0016019.1 MGP_LPJ_G0014110.1 mouse_genomes_project 9 72921881 72922089 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016025.1 MGP_LPJ_G0014116.1 mouse_genomes_project 9 74881413 74881891 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091380.1 MGP_LPJ_G0034427.1 mouse_genomes_project 9 33176751 33231109 - MGP_LPJ_P0091380 Dcps protein_coding protein_coding MGP_LPJ_T0091381.1 MGP_LPJ_G0034427.1 mouse_genomes_project 9 33178654 33231134 - MGP_LPJ_P0091381 Dcps protein_coding nonsense_mediated_decay MGP_LPJ_T0005499.1 MGP_LPJ_G0004650.1 mouse_genomes_project 9 72991033 72994402 - Gm27241 antisense antisense MGP_LPJ_T0005500.1 MGP_LPJ_G0004650.1 mouse_genomes_project 9 72991167 72994574 - Gm27241 antisense antisense MGP_LPJ_T0093075.1 MGP_LPJ_G0034967.1 mouse_genomes_project 9 80381359 80505549 - MGP_LPJ_P0093075 Col12a1 protein_coding protein_coding MGP_LPJ_T0093076.1 MGP_LPJ_G0034967.1 mouse_genomes_project 9 80381359 80395322 - MGP_LPJ_P0093076 Col12a1 protein_coding protein_coding MGP_LPJ_T0093077.1 MGP_LPJ_G0034967.1 mouse_genomes_project 9 80384126 80505751 - MGP_LPJ_P0093077 Col12a1 protein_coding protein_coding MGP_LPJ_T0093078.1 MGP_LPJ_G0034967.1 mouse_genomes_project 9 80479732 80505751 - Col12a1 protein_coding retained_intron MGP_LPJ_T0093079.1 MGP_LPJ_G0034967.1 mouse_genomes_project 9 80499573 80505862 - Col12a1 protein_coding retained_intron MGP_LPJ_T0093080.1 MGP_LPJ_G0034967.1 mouse_genomes_project 9 80501944 80505525 - Col12a1 protein_coding retained_intron MGP_LPJ_T0016013.1 MGP_LPJ_G0014104.1 mouse_genomes_project 9 72258686 72259395 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099833.1 MGP_LPJ_G0038096.1 mouse_genomes_project 9 65938788 65938895 + Gm23248 snRNA snRNA MGP_LPJ_T0092085.1 MGP_LPJ_G0034701.1 mouse_genomes_project 9 51996535 52002920 - MGP_LPJ_P0092085 AI593442 protein_coding protein_coding MGP_LPJ_T0095129.1 MGP_LPJ_G0035383.1 mouse_genomes_project 9 127962904 127971182 - MGP_LPJ_P0095129 protein_coding unknown_likely_coding MGP_LPJ_T0095130.1 MGP_LPJ_G0035383.1 mouse_genomes_project 9 127965164 127965420 - MGP_LPJ_P0095130 protein_coding protein_coding MGP_LPJ_T0094477.1 MGP_LPJ_G0035212.1 mouse_genomes_project 9 111202219 111216545 - MGP_LPJ_P0094477 Atrip protein_coding protein_coding MGP_LPJ_T0094478.1 MGP_LPJ_G0035212.1 mouse_genomes_project 9 111202257 111216473 - MGP_LPJ_P0094478 Atrip protein_coding protein_coding MGP_LPJ_T0094479.1 MGP_LPJ_G0035212.1 mouse_genomes_project 9 111202282 111204695 - Atrip protein_coding retained_intron MGP_LPJ_T0094480.1 MGP_LPJ_G0035212.1 mouse_genomes_project 9 111203133 111207799 - MGP_LPJ_P0094480 Atrip protein_coding protein_coding MGP_LPJ_T0094481.1 MGP_LPJ_G0035212.1 mouse_genomes_project 9 111209881 111211935 - Atrip protein_coding retained_intron MGP_LPJ_T0094482.1 MGP_LPJ_G0035212.1 mouse_genomes_project 9 111214159 111216487 - Atrip protein_coding retained_intron MGP_LPJ_T0094412.1 MGP_LPJ_G0035203.1 mouse_genomes_project 9 111032935 111033938 + Slc26a6 protein_coding processed_transcript MGP_LPJ_T0094413.1 MGP_LPJ_G0035203.1 mouse_genomes_project 9 111033000 111041797 + MGP_LPJ_P0094413 Slc26a6 protein_coding protein_coding MGP_LPJ_T0094414.1 MGP_LPJ_G0035203.1 mouse_genomes_project 9 111033690 111040482 + MGP_LPJ_P0094414 Slc26a6 protein_coding nonsense_mediated_decay MGP_LPJ_T0094415.1 MGP_LPJ_G0035203.1 mouse_genomes_project 9 111033690 111045308 + MGP_LPJ_P0094415 Slc26a6 protein_coding protein_coding MGP_LPJ_T0094416.1 MGP_LPJ_G0035203.1 mouse_genomes_project 9 111033696 111041797 + MGP_LPJ_P0094416 Slc26a6 protein_coding protein_coding MGP_LPJ_T0094417.1 MGP_LPJ_G0035203.1 mouse_genomes_project 9 111033727 111041797 + Slc26a6 protein_coding retained_intron MGP_LPJ_T0094418.1 MGP_LPJ_G0035203.1 mouse_genomes_project 9 111033747 111041797 + Slc26a6 protein_coding retained_intron MGP_LPJ_T0094419.1 MGP_LPJ_G0035203.1 mouse_genomes_project 9 111033788 111041797 + MGP_LPJ_P0094419 Slc26a6 protein_coding protein_coding MGP_LPJ_T0094420.1 MGP_LPJ_G0035203.1 mouse_genomes_project 9 111034252 111045533 + MGP_LPJ_P0094420 Slc26a6 protein_coding unknown_likely_coding MGP_LPJ_T0094421.1 MGP_LPJ_G0035203.1 mouse_genomes_project 9 111035315 111041797 + MGP_LPJ_P0094421 Slc26a6 protein_coding nonsense_mediated_decay MGP_LPJ_T0094422.1 MGP_LPJ_G0035203.1 mouse_genomes_project 9 111045159 111045799 + MGP_LPJ_P0094422 Slc26a6 protein_coding protein_coding MGP_LPJ_T0092579.1 MGP_LPJ_G0034849.1 mouse_genomes_project 9 65296680 65332100 + MGP_LPJ_P0092579 Clpx protein_coding protein_coding MGP_LPJ_T0092580.1 MGP_LPJ_G0034849.1 mouse_genomes_project 9 65296715 65332101 + MGP_LPJ_P0092580 Clpx protein_coding protein_coding MGP_LPJ_T0092581.1 MGP_LPJ_G0034849.1 mouse_genomes_project 9 65296752 65310629 + Clpx protein_coding retained_intron MGP_LPJ_T0092582.1 MGP_LPJ_G0034849.1 mouse_genomes_project 9 65311532 65319894 + MGP_LPJ_P0092582 Clpx protein_coding protein_coding MGP_LPJ_T0093223.1 MGP_LPJ_G0034993.1 mouse_genomes_project 9 87834458 87952767 - MGP_LPJ_P0093223 Snap91 protein_coding protein_coding MGP_LPJ_T0093224.1 MGP_LPJ_G0034993.1 mouse_genomes_project 9 87834468 87878946 - Snap91 protein_coding retained_intron MGP_LPJ_T0093225.1 MGP_LPJ_G0034993.1 mouse_genomes_project 9 87834471 87952777 - MGP_LPJ_P0093225 Snap91 protein_coding protein_coding MGP_LPJ_T0093226.1 MGP_LPJ_G0034993.1 mouse_genomes_project 9 87834471 87952777 - MGP_LPJ_P0093226 Snap91 protein_coding protein_coding MGP_LPJ_T0093227.1 MGP_LPJ_G0034993.1 mouse_genomes_project 9 87835213 87952742 - MGP_LPJ_P0093227 Snap91 protein_coding protein_coding MGP_LPJ_T0093228.1 MGP_LPJ_G0034993.1 mouse_genomes_project 9 87843923 87868865 - Snap91 protein_coding retained_intron MGP_LPJ_T0093229.1 MGP_LPJ_G0034993.1 mouse_genomes_project 9 87862756 87869039 - Snap91 protein_coding retained_intron MGP_LPJ_T0093230.1 MGP_LPJ_G0034993.1 mouse_genomes_project 9 87876673 87900639 - Snap91 protein_coding processed_transcript MGP_LPJ_T0093231.1 MGP_LPJ_G0034993.1 mouse_genomes_project 9 87893804 87952982 - Snap91 protein_coding retained_intron MGP_LPJ_T0093232.1 MGP_LPJ_G0034993.1 mouse_genomes_project 9 87906425 87952725 - MGP_LPJ_P0093232 Snap91 protein_coding protein_coding MGP_LPJ_T0092090.1 MGP_LPJ_G0034704.1 mouse_genomes_project 9 52710346 52728176 + MGP_LPJ_P0092090 Kdelc2 protein_coding protein_coding MGP_LPJ_T0093782.1 MGP_LPJ_G0035105.1 mouse_genomes_project 9 107596137 107635831 + Pik3r4 protein_coding retained_intron MGP_LPJ_T0093783.1 MGP_LPJ_G0035105.1 mouse_genomes_project 9 107596140 107597913 + MGP_LPJ_P0093783 Pik3r4 protein_coding protein_coding MGP_LPJ_T0093784.1 MGP_LPJ_G0035105.1 mouse_genomes_project 9 107596167 107609527 + Pik3r4 protein_coding retained_intron MGP_LPJ_T0093785.1 MGP_LPJ_G0035105.1 mouse_genomes_project 9 107596174 107617851 + Pik3r4 protein_coding retained_intron MGP_LPJ_T0093786.1 MGP_LPJ_G0035105.1 mouse_genomes_project 9 107596189 107645396 + MGP_LPJ_P0093786 Pik3r4 protein_coding protein_coding MGP_LPJ_T0093787.1 MGP_LPJ_G0035105.1 mouse_genomes_project 9 107596323 107645521 + MGP_LPJ_P0093787 Pik3r4 protein_coding protein_coding MGP_LPJ_T0093788.1 MGP_LPJ_G0035105.1 mouse_genomes_project 9 107596354 107601953 + MGP_LPJ_P0093788 Pik3r4 protein_coding protein_coding MGP_LPJ_T0093789.1 MGP_LPJ_G0035105.1 mouse_genomes_project 9 107612240 107623044 + MGP_LPJ_P0093789 Pik3r4 protein_coding protein_coding MGP_LPJ_T0093790.1 MGP_LPJ_G0035105.1 mouse_genomes_project 9 107615187 107617391 + Pik3r4 protein_coding retained_intron MGP_LPJ_T0093791.1 MGP_LPJ_G0035105.1 mouse_genomes_project 9 107638383 107644259 + Pik3r4 protein_coding retained_intron MGP_LPJ_T0091025.1 MGP_LPJ_G0034285.1 mouse_genomes_project 9 16280067 16281006 + MGP_LPJ_P0091025 Olfr834 protein_coding protein_coding MGP_LPJ_T0016115.1 MGP_LPJ_G0014206.1 mouse_genomes_project 9 110285519 110286042 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009291.1 MGP_LPJ_G0007466.1 mouse_genomes_project 9 77685209 77690483 + Gm19541 lincRNA lincRNA MGP_LPJ_T0094986.1 MGP_LPJ_G0035332.1 mouse_genomes_project 9 124763347 124769190 - MGP_LPJ_P0094986 Cck protein_coding protein_coding MGP_LPJ_T0092390.1 MGP_LPJ_G0034801.1 mouse_genomes_project 9 59344311 59379216 + MGP_LPJ_P0092390 Gramd2 protein_coding protein_coding MGP_LPJ_T0092391.1 MGP_LPJ_G0034801.1 mouse_genomes_project 9 59372896 59383856 + MGP_LPJ_P0092391 Gramd2 protein_coding protein_coding MGP_LPJ_T0092392.1 MGP_LPJ_G0034801.1 mouse_genomes_project 9 59373023 59381717 + MGP_LPJ_P0092392 Gramd2 protein_coding protein_coding MGP_LPJ_T0092393.1 MGP_LPJ_G0034801.1 mouse_genomes_project 9 59375416 59379134 + Gramd2 protein_coding retained_intron MGP_LPJ_T0092394.1 MGP_LPJ_G0034801.1 mouse_genomes_project 9 59376440 59381607 + MGP_LPJ_P0092394 Gramd2 protein_coding protein_coding MGP_LPJ_T0092395.1 MGP_LPJ_G0034801.1 mouse_genomes_project 9 59379408 59383856 + Gramd2 protein_coding retained_intron MGP_LPJ_T0099835.1 MGP_LPJ_G0038098.1 mouse_genomes_project 9 67135949 67136047 - Gm24225 snRNA snRNA MGP_LPJ_T0091141.1 MGP_LPJ_G0034343.1 mouse_genomes_project 9 18611850 18618796 - MGP_LPJ_P0091141 S1pr5 protein_coding protein_coding MGP_LPJ_T0092148.1 MGP_LPJ_G0034727.1 mouse_genomes_project 9 54242722 54291239 + MGP_LPJ_P0092148 Ireb2 protein_coding protein_coding MGP_LPJ_T0099852.1 MGP_LPJ_G0038115.1 mouse_genomes_project 9 89609723 89609839 - Gm22985 snRNA snRNA MGP_LPJ_T0092067.1 MGP_LPJ_G0034692.1 mouse_genomes_project 9 50399513 50403210 + MGP_LPJ_P0092067 Btg4 protein_coding protein_coding MGP_LPJ_T0092343.1 MGP_LPJ_G0034784.1 mouse_genomes_project 9 57817283 57828924 + MGP_LPJ_P0092343 Stoml1 protein_coding protein_coding MGP_LPJ_T0092505.1 MGP_LPJ_G0034828.1 mouse_genomes_project 9 63547319 63661120 - MGP_LPJ_P0092505 Smad3 protein_coding protein_coding MGP_LPJ_T0092506.1 MGP_LPJ_G0034828.1 mouse_genomes_project 9 63555320 63567065 - MGP_LPJ_P0092506 Smad3 protein_coding protein_coding MGP_LPJ_T0092507.1 MGP_LPJ_G0034828.1 mouse_genomes_project 9 63555348 63615486 - MGP_LPJ_P0092507 Smad3 protein_coding protein_coding MGP_LPJ_T0092508.1 MGP_LPJ_G0034828.1 mouse_genomes_project 9 63566665 63654220 - MGP_LPJ_P0092508 Smad3 protein_coding protein_coding MGP_LPJ_T0092509.1 MGP_LPJ_G0034828.1 mouse_genomes_project 9 63568330 63646448 - Smad3 protein_coding processed_transcript MGP_LPJ_T0094953.1 MGP_LPJ_G0035324.1 mouse_genomes_project 9 123472503 123671188 + MGP_LPJ_P0094953 Myrip protein_coding protein_coding MGP_LPJ_T0094954.1 MGP_LPJ_G0035324.1 mouse_genomes_project 9 123575776 123616674 + MGP_LPJ_P0094954 Myrip protein_coding protein_coding MGP_LPJ_T0094955.1 MGP_LPJ_G0035324.1 mouse_genomes_project 9 123600875 123609221 + Myrip protein_coding processed_transcript MGP_LPJ_T0094956.1 MGP_LPJ_G0035324.1 mouse_genomes_project 9 123619418 123624496 + Myrip protein_coding processed_transcript MGP_LPJ_T0093539.1 MGP_LPJ_G0035061.1 mouse_genomes_project 9 101199999 101208732 + MGP_LPJ_P0093539 Dbr1 protein_coding protein_coding MGP_LPJ_T0093540.1 MGP_LPJ_G0035061.1 mouse_genomes_project 9 101200028 101206657 + MGP_LPJ_P0093540 Dbr1 protein_coding protein_coding MGP_LPJ_T0093541.1 MGP_LPJ_G0035061.1 mouse_genomes_project 9 101200280 101206265 + MGP_LPJ_P0093541 Dbr1 protein_coding protein_coding MGP_LPJ_T0093542.1 MGP_LPJ_G0035061.1 mouse_genomes_project 9 101200308 101206274 + MGP_LPJ_P0093542 Dbr1 protein_coding protein_coding MGP_LPJ_T0093543.1 MGP_LPJ_G0035061.1 mouse_genomes_project 9 101204412 101208069 + MGP_LPJ_P0093543 Dbr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0093544.1 MGP_LPJ_G0035061.1 mouse_genomes_project 9 101204507 101206905 + MGP_LPJ_P0093544 Dbr1 protein_coding protein_coding MGP_LPJ_T0009296.1 MGP_LPJ_G0007471.1 mouse_genomes_project 9 82002479 82025893 + Gm26713 lincRNA lincRNA MGP_LPJ_T0009222.1 MGP_LPJ_G0007409.1 mouse_genomes_project 9 17736478 17872920 + lincRNA lincRNA MGP_LPJ_T0091971.1 MGP_LPJ_G0034668.1 mouse_genomes_project 9 48647363 48696534 - MGP_LPJ_P0091971 Ttc12 protein_coding protein_coding MGP_LPJ_T0091972.1 MGP_LPJ_G0034668.1 mouse_genomes_project 9 48667979 48696524 - Ttc12 protein_coding retained_intron MGP_LPJ_T0099805.1 MGP_LPJ_G0038068.1 mouse_genomes_project 9 12288488 12288643 - Gm22658 snRNA snRNA MGP_LPJ_T0091709.1 MGP_LPJ_G0034586.1 mouse_genomes_project 9 42858738 42866200 + MGP_LPJ_P0091709 Mfrp protein_coding protein_coding MGP_LPJ_T0091710.1 MGP_LPJ_G0034586.1 mouse_genomes_project 9 42858747 42863538 + MGP_LPJ_P0091710 Mfrp protein_coding nonsense_mediated_decay MGP_LPJ_T0091711.1 MGP_LPJ_G0034586.1 mouse_genomes_project 9 42858763 42866197 + MGP_LPJ_P0091711 Mfrp protein_coding protein_coding MGP_LPJ_T0091712.1 MGP_LPJ_G0034586.1 mouse_genomes_project 9 42858779 42866197 + MGP_LPJ_P0091712 Mfrp protein_coding protein_coding MGP_LPJ_T0091713.1 MGP_LPJ_G0034586.1 mouse_genomes_project 9 42858797 42860316 + MGP_LPJ_P0091713 Mfrp protein_coding nonsense_mediated_decay MGP_LPJ_T0091714.1 MGP_LPJ_G0034586.1 mouse_genomes_project 9 42862194 42863440 + MGP_LPJ_P0091714 Mfrp protein_coding protein_coding MGP_LPJ_T0099850.1 MGP_LPJ_G0038113.1 mouse_genomes_project 9 85581090 85581254 + Gm26126 snRNA snRNA MGP_LPJ_T0002446.1 MGP_LPJ_G0002352.1 mouse_genomes_project 9 99473222 99474772 - TEC TEC MGP_LPJ_T0009226.1 MGP_LPJ_G0007413.1 mouse_genomes_project 9 19107487 19113345 - Gm26511 lincRNA lincRNA MGP_LPJ_T0099811.1 MGP_LPJ_G0038074.1 mouse_genomes_project 9 20288000 20288085 - Gm27639 snRNA snRNA MGP_LPJ_T0091461.1 MGP_LPJ_G0034454.1 mouse_genomes_project 9 34886331 34924415 - MGP_LPJ_P0091461 Stt3a protein_coding protein_coding MGP_LPJ_T0091462.1 MGP_LPJ_G0034454.1 mouse_genomes_project 9 34890543 34914463 - MGP_LPJ_P0091462 Stt3a protein_coding protein_coding MGP_LPJ_T0091463.1 MGP_LPJ_G0034454.1 mouse_genomes_project 9 34910103 34924355 - MGP_LPJ_P0091463 Stt3a protein_coding nonsense_mediated_decay MGP_LPJ_T0091464.1 MGP_LPJ_G0034454.1 mouse_genomes_project 9 34915802 34916809 - Stt3a protein_coding retained_intron MGP_LPJ_T0091465.1 MGP_LPJ_G0034454.1 mouse_genomes_project 9 34916230 34924086 - MGP_LPJ_P0091465 Stt3a protein_coding protein_coding MGP_LPJ_T0091466.1 MGP_LPJ_G0034454.1 mouse_genomes_project 9 34919368 34924309 - Stt3a protein_coding retained_intron MGP_LPJ_T0091467.1 MGP_LPJ_G0034454.1 mouse_genomes_project 9 34919588 34924352 - Stt3a protein_coding retained_intron MGP_LPJ_T0101125.1 MGP_LPJ_G0039388.1 mouse_genomes_project 9 93792352 93792483 - Gm25417 snoRNA snoRNA MGP_LPJ_T0091428.1 MGP_LPJ_G0034437.1 mouse_genomes_project 9 33628131 33752366 + MGP_LPJ_P0091428 Pate2 protein_coding protein_coding MGP_LPJ_T0091429.1 MGP_LPJ_G0034437.1 mouse_genomes_project 9 33631718 33707938 + Pate2 protein_coding processed_transcript MGP_LPJ_T0091432.1 MGP_LPJ_G0034437.1 mouse_genomes_project 9 33733466 33736730 + MGP_LPJ_P0091432 Pate2 protein_coding protein_coding MGP_LPJ_T0091433.1 MGP_LPJ_G0034437.1 mouse_genomes_project 9 33733478 33735248 + Pate2 protein_coding retained_intron MGP_LPJ_T0091956.1 MGP_LPJ_G0034659.1 mouse_genomes_project 9 47802438 47998019 - MGP_LPJ_P0091956 Zbtb16 protein_coding unknown_likely_coding MGP_LPJ_T0011117.1 MGP_LPJ_G0009235.1 mouse_genomes_project 9 110730692 110730777 + Mir425 miRNA miRNA MGP_LPJ_T0094511.1 MGP_LPJ_G0035224.1 mouse_genomes_project 9 112071677 112156845 - MGP_LPJ_P0094511 Fbxw26 protein_coding protein_coding MGP_LPJ_T0011086.1 MGP_LPJ_G0009204.1 mouse_genomes_project 9 52727113 52727195 - Mir130c miRNA miRNA MGP_LPJ_T0093352.1 MGP_LPJ_G0035020.1 mouse_genomes_project 9 93521496 93531594 + MGP_LPJ_P0093352 Plscr2 protein_coding protein_coding MGP_LPJ_T0093353.1 MGP_LPJ_G0035020.1 mouse_genomes_project 9 93521736 93548226 + MGP_LPJ_P0093353 Plscr2 protein_coding protein_coding MGP_LPJ_T0093354.1 MGP_LPJ_G0035020.1 mouse_genomes_project 9 93541906 93542811 + Plscr2 protein_coding retained_intron MGP_LPJ_T0002452.1 MGP_LPJ_G0002358.1 mouse_genomes_project 9 101821751 101822895 - TEC TEC MGP_LPJ_T0091351.1 MGP_LPJ_G0034419.1 mouse_genomes_project 9 29772118 29845666 - MGP_LPJ_P0091351 Barx2 protein_coding protein_coding MGP_LPJ_T0093190.1 MGP_LPJ_G0034988.1 mouse_genomes_project 9 87506508 87598007 + MGP_LPJ_P0093190 Dopey1 protein_coding protein_coding MGP_LPJ_T0093191.1 MGP_LPJ_G0034988.1 mouse_genomes_project 9 87506524 87549997 + Dopey1 protein_coding retained_intron MGP_LPJ_T0093192.1 MGP_LPJ_G0034988.1 mouse_genomes_project 9 87506529 87596402 + MGP_LPJ_P0093192 Dopey1 protein_coding unknown_likely_coding MGP_LPJ_T0093193.1 MGP_LPJ_G0034988.1 mouse_genomes_project 9 87506533 87544883 + Dopey1 protein_coding retained_intron MGP_LPJ_T0093194.1 MGP_LPJ_G0034988.1 mouse_genomes_project 9 87506565 87546007 + Dopey1 protein_coding retained_intron MGP_LPJ_T0093195.1 MGP_LPJ_G0034988.1 mouse_genomes_project 9 87506565 87554739 + MGP_LPJ_P0093195 Dopey1 protein_coding protein_coding MGP_LPJ_T0093196.1 MGP_LPJ_G0034988.1 mouse_genomes_project 9 87506568 87597885 + MGP_LPJ_P0093196 Dopey1 protein_coding nonsense_mediated_decay MGP_LPJ_T0093197.1 MGP_LPJ_G0034988.1 mouse_genomes_project 9 87526283 87597887 + MGP_LPJ_P0093197 Dopey1 protein_coding protein_coding MGP_LPJ_T0093198.1 MGP_LPJ_G0034988.1 mouse_genomes_project 9 87528105 87530912 + Dopey1 protein_coding retained_intron MGP_LPJ_T0093199.1 MGP_LPJ_G0034988.1 mouse_genomes_project 9 87530440 87533362 + Dopey1 protein_coding retained_intron MGP_LPJ_T0093200.1 MGP_LPJ_G0034988.1 mouse_genomes_project 9 87538737 87542710 + Dopey1 protein_coding retained_intron MGP_LPJ_T0093201.1 MGP_LPJ_G0034988.1 mouse_genomes_project 9 87545353 87549274 + Dopey1 protein_coding retained_intron MGP_LPJ_T0093202.1 MGP_LPJ_G0034988.1 mouse_genomes_project 9 87545645 87558086 + Dopey1 protein_coding retained_intron MGP_LPJ_T0093203.1 MGP_LPJ_G0034988.1 mouse_genomes_project 9 87562841 87566784 + MGP_LPJ_P0093203 Dopey1 protein_coding protein_coding MGP_LPJ_T0093204.1 MGP_LPJ_G0034988.1 mouse_genomes_project 9 87565190 87588598 + Dopey1 protein_coding retained_intron MGP_LPJ_T0093205.1 MGP_LPJ_G0034988.1 mouse_genomes_project 9 87573814 87596706 + Dopey1 protein_coding retained_intron MGP_LPJ_T0093206.1 MGP_LPJ_G0034988.1 mouse_genomes_project 9 87575255 87596711 + MGP_LPJ_P0093206 Dopey1 protein_coding nonsense_mediated_decay MGP_LPJ_T0093207.1 MGP_LPJ_G0034988.1 mouse_genomes_project 9 87584880 87591228 + Dopey1 protein_coding retained_intron MGP_LPJ_T0093208.1 MGP_LPJ_G0034988.1 mouse_genomes_project 9 87591727 87596711 + Dopey1 protein_coding retained_intron MGP_LPJ_T0091853.1 MGP_LPJ_G0034629.1 mouse_genomes_project 9 44026679 44038839 + BC049352 protein_coding lincRNA MGP_LPJ_T0091854.1 MGP_LPJ_G0034629.1 mouse_genomes_project 9 44026706 44107104 + BC049352 protein_coding lincRNA MGP_LPJ_T0091855.1 MGP_LPJ_G0034629.1 mouse_genomes_project 9 44041617 44107104 + BC049352 protein_coding lincRNA MGP_LPJ_T0091856.1 MGP_LPJ_G0034629.1 mouse_genomes_project 9 44041617 44107070 + MGP_LPJ_P0091856 BC049352 protein_coding protein_coding MGP_LPJ_T0091590.1 MGP_LPJ_G0034526.1 mouse_genomes_project 9 37568437 37569400 - MGP_LPJ_P0091590 Olfr945 protein_coding protein_coding MGP_LPJ_T0016112.1 MGP_LPJ_G0014203.1 mouse_genomes_project 9 108120861 108121459 - processed_pseudogene processed_pseudogene MGP_LPJ_T0094948.1 MGP_LPJ_G0035322.1 mouse_genomes_project 9 123286402 123291033 + MGP_LPJ_P0094948 Rpsa protein_coding protein_coding MGP_LPJ_T0011065.1 MGP_LPJ_G0009183.1 mouse_genomes_project 9 18387000 18387078 - Mir1900 miRNA miRNA MGP_LPJ_T0094108.1 MGP_LPJ_G0035158.1 mouse_genomes_project 9 109868752 109983163 - MGP_LPJ_P0094108 Rbm6 protein_coding protein_coding MGP_LPJ_T0094109.1 MGP_LPJ_G0035158.1 mouse_genomes_project 9 109868757 109983155 - MGP_LPJ_P0094109 Rbm6 protein_coding protein_coding MGP_LPJ_T0094110.1 MGP_LPJ_G0035158.1 mouse_genomes_project 9 109868761 109983097 - MGP_LPJ_P0094110 Rbm6 protein_coding nonsense_mediated_decay MGP_LPJ_T0094111.1 MGP_LPJ_G0035158.1 mouse_genomes_project 9 109875245 109877544 - Rbm6 protein_coding retained_intron MGP_LPJ_T0094112.1 MGP_LPJ_G0035158.1 mouse_genomes_project 9 109887840 109892771 - Rbm6 protein_coding retained_intron MGP_LPJ_T0094113.1 MGP_LPJ_G0035158.1 mouse_genomes_project 9 109888073 109895371 - MGP_LPJ_P0094113 Rbm6 protein_coding protein_coding MGP_LPJ_T0094114.1 MGP_LPJ_G0035158.1 mouse_genomes_project 9 109895379 109983067 - MGP_LPJ_P0094114 Rbm6 protein_coding protein_coding MGP_LPJ_T0094115.1 MGP_LPJ_G0035158.1 mouse_genomes_project 9 109907344 109983069 - Rbm6 protein_coding processed_transcript MGP_LPJ_T0094116.1 MGP_LPJ_G0035158.1 mouse_genomes_project 9 109918712 109954817 - Rbm6 protein_coding processed_transcript MGP_LPJ_T0094117.1 MGP_LPJ_G0035158.1 mouse_genomes_project 9 109939141 109983078 - Rbm6 protein_coding retained_intron MGP_LPJ_T0094118.1 MGP_LPJ_G0035158.1 mouse_genomes_project 9 109954702 109958875 - Rbm6 protein_coding retained_intron MGP_LPJ_T0094119.1 MGP_LPJ_G0035158.1 mouse_genomes_project 9 109961692 109983109 - MGP_LPJ_P0094119 Rbm6 protein_coding protein_coding MGP_LPJ_T0094120.1 MGP_LPJ_G0035158.1 mouse_genomes_project 9 109961743 109982755 - MGP_LPJ_P0094120 Rbm6 protein_coding protein_coding MGP_LPJ_T0094121.1 MGP_LPJ_G0035158.1 mouse_genomes_project 9 109966663 109983056 - Rbm6 protein_coding retained_intron MGP_LPJ_T0094122.1 MGP_LPJ_G0035158.1 mouse_genomes_project 9 109979172 109983571 - Rbm6 protein_coding retained_intron MGP_LPJ_T0092166.1 MGP_LPJ_G0034734.1 mouse_genomes_project 9 54541598 54599632 + MGP_LPJ_P0092166 Ube2q2 protein_coding protein_coding MGP_LPJ_T0092167.1 MGP_LPJ_G0034734.1 mouse_genomes_project 9 54541838 54600767 + MGP_LPJ_P0092167 Ube2q2 protein_coding protein_coding MGP_LPJ_T0092168.1 MGP_LPJ_G0034734.1 mouse_genomes_project 9 54542286 54600041 + MGP_LPJ_P0092168 Ube2q2 protein_coding protein_coding MGP_LPJ_T0092169.1 MGP_LPJ_G0034734.1 mouse_genomes_project 9 54587616 54599328 + Ube2q2 protein_coding retained_intron MGP_LPJ_T0090857.1 MGP_LPJ_G0034226.1 mouse_genomes_project 9 4605855 4613375 + MGP_LPJ_P0090857 Mmp7 protein_coding protein_coding MGP_LPJ_T0009332.1 MGP_LPJ_G0007498.1 mouse_genomes_project 9 102114132 102115723 + Gm28166 lincRNA lincRNA MGP_LPJ_T0091627.1 MGP_LPJ_G0034557.1 mouse_genomes_project 9 38606820 38607936 - MGP_LPJ_P0091627 Olfr985 protein_coding protein_coding MGP_LPJ_T0092396.1 MGP_LPJ_G0034802.1 mouse_genomes_project 9 59400913 59417042 - MGP_LPJ_P0092396 Senp8 protein_coding protein_coding MGP_LPJ_T0092397.1 MGP_LPJ_G0034802.1 mouse_genomes_project 9 59400913 59417042 - MGP_LPJ_P0092397 Senp8 protein_coding protein_coding MGP_LPJ_T0099837.1 MGP_LPJ_G0038100.1 mouse_genomes_project 9 68666919 68667027 - Gm22169 snRNA snRNA MGP_LPJ_T0016102.1 MGP_LPJ_G0014193.1 mouse_genomes_project 9 104325069 104325270 + processed_pseudogene processed_pseudogene MGP_LPJ_T0094817.1 MGP_LPJ_G0035282.1 mouse_genomes_project 9 117525282 117549613 + MGP_LPJ_P0094817 Cmtm6 protein_coding protein_coding MGP_LPJ_T0016035.1 MGP_LPJ_G0014126.1 mouse_genomes_project 9 77629269 77629507 + processed_pseudogene processed_pseudogene MGP_LPJ_T0091364.1 MGP_LPJ_G0034424.1 mouse_genomes_project 9 30614356 30715593 + Ets1 protein_coding retained_intron MGP_LPJ_T0091365.1 MGP_LPJ_G0034424.1 mouse_genomes_project 9 30614374 30629475 + Ets1 protein_coding retained_intron MGP_LPJ_T0091366.1 MGP_LPJ_G0034424.1 mouse_genomes_project 9 30680627 30744458 + MGP_LPJ_P0091366 Ets1 protein_coding protein_coding MGP_LPJ_T0091367.1 MGP_LPJ_G0034424.1 mouse_genomes_project 9 30680654 30741615 + MGP_LPJ_P0091367 Ets1 protein_coding protein_coding MGP_LPJ_T0091368.1 MGP_LPJ_G0034424.1 mouse_genomes_project 9 30680726 30741886 + MGP_LPJ_P0091368 Ets1 protein_coding protein_coding MGP_LPJ_T0091369.1 MGP_LPJ_G0034424.1 mouse_genomes_project 9 30680989 30741041 + MGP_LPJ_P0091369 Ets1 protein_coding protein_coding MGP_LPJ_T0091405.1 MGP_LPJ_G0034431.1 mouse_genomes_project 9 33272357 33327948 - MGP_LPJ_P0091405 Fam118b protein_coding protein_coding MGP_LPJ_T0091406.1 MGP_LPJ_G0034431.1 mouse_genomes_project 9 33272412 33327973 - MGP_LPJ_P0091406 Fam118b protein_coding protein_coding MGP_LPJ_T0091407.1 MGP_LPJ_G0034431.1 mouse_genomes_project 9 33272412 33327945 - MGP_LPJ_P0091407 Fam118b protein_coding protein_coding MGP_LPJ_T0091408.1 MGP_LPJ_G0034431.1 mouse_genomes_project 9 33272627 33292608 - MGP_LPJ_P0091408 Fam118b protein_coding protein_coding MGP_LPJ_T0091409.1 MGP_LPJ_G0034431.1 mouse_genomes_project 9 33278716 33327935 - MGP_LPJ_P0091409 Fam118b protein_coding protein_coding MGP_LPJ_T0091410.1 MGP_LPJ_G0034431.1 mouse_genomes_project 9 33289210 33327948 - Fam118b protein_coding retained_intron MGP_LPJ_T0091411.1 MGP_LPJ_G0034431.1 mouse_genomes_project 9 33326478 33327948 - Fam118b protein_coding retained_intron MGP_LPJ_T0094937.1 MGP_LPJ_G0035317.1 mouse_genomes_project 9 123116045 123128268 - MGP_LPJ_P0094937 Csrnp1 protein_coding unknown_likely_coding MGP_LPJ_T0091019.1 MGP_LPJ_G0034279.1 mouse_genomes_project 9 16035905 16036959 - MGP_LPJ_P0091019 Olfr24 protein_coding protein_coding MGP_LPJ_T0002451.1 MGP_LPJ_G0002357.1 mouse_genomes_project 9 100936548 100937239 + TEC TEC MGP_LPJ_T0092852.1 MGP_LPJ_G0034910.1 mouse_genomes_project 9 72817024 72858892 - MGP_LPJ_P0092852 Tex9 protein_coding nonsense_mediated_decay MGP_LPJ_T0092853.1 MGP_LPJ_G0034910.1 mouse_genomes_project 9 72825248 72858892 - MGP_LPJ_P0092853 Tex9 protein_coding protein_coding MGP_LPJ_T0092854.1 MGP_LPJ_G0034910.1 mouse_genomes_project 9 72826393 72859037 - MGP_LPJ_P0092854 Tex9 protein_coding protein_coding MGP_LPJ_T0092855.1 MGP_LPJ_G0034910.1 mouse_genomes_project 9 72827017 72841520 - Tex9 protein_coding retained_intron MGP_LPJ_T0092856.1 MGP_LPJ_G0034910.1 mouse_genomes_project 9 72827748 72859148 - MGP_LPJ_P0092856 Tex9 protein_coding protein_coding MGP_LPJ_T0092857.1 MGP_LPJ_G0034910.1 mouse_genomes_project 9 72827749 72859037 - MGP_LPJ_P0092857 Tex9 protein_coding protein_coding MGP_LPJ_T0092858.1 MGP_LPJ_G0034910.1 mouse_genomes_project 9 72827776 72859143 - MGP_LPJ_P0092858 Tex9 protein_coding nonsense_mediated_decay MGP_LPJ_T0092859.1 MGP_LPJ_G0034910.1 mouse_genomes_project 9 72827852 72859037 - MGP_LPJ_P0092859 Tex9 protein_coding nonsense_mediated_decay MGP_LPJ_T0092860.1 MGP_LPJ_G0034910.1 mouse_genomes_project 9 72827874 72858933 - MGP_LPJ_P0092860 Tex9 protein_coding unknown_likely_coding MGP_LPJ_T0092861.1 MGP_LPJ_G0034910.1 mouse_genomes_project 9 72828599 72858897 - Tex9 protein_coding retained_intron MGP_LPJ_T0092862.1 MGP_LPJ_G0034910.1 mouse_genomes_project 9 72828618 72846219 - Tex9 protein_coding processed_transcript MGP_LPJ_T0092863.1 MGP_LPJ_G0034910.1 mouse_genomes_project 9 72828648 72854962 - MGP_LPJ_P0092863 Tex9 protein_coding nonsense_mediated_decay MGP_LPJ_T0092864.1 MGP_LPJ_G0034910.1 mouse_genomes_project 9 72843676 72844518 - Tex9 protein_coding retained_intron MGP_LPJ_T0092865.1 MGP_LPJ_G0034910.1 mouse_genomes_project 9 72843776 72853560 - MGP_LPJ_P0092865 Tex9 protein_coding protein_coding MGP_LPJ_T0092866.1 MGP_LPJ_G0034910.1 mouse_genomes_project 9 72843777 72858875 - MGP_LPJ_P0092866 Tex9 protein_coding protein_coding MGP_LPJ_T0092867.1 MGP_LPJ_G0034910.1 mouse_genomes_project 9 72846155 72859025 - Tex9 protein_coding retained_intron MGP_LPJ_T0092868.1 MGP_LPJ_G0034910.1 mouse_genomes_project 9 72846334 72858871 - Tex9 protein_coding retained_intron MGP_LPJ_T0091656.1 MGP_LPJ_G0034566.1 mouse_genomes_project 9 39400628 39404516 + MGP_LPJ_P0091656 Bsx protein_coding protein_coding MGP_LPJ_T0090934.1 MGP_LPJ_G0034249.1 mouse_genomes_project 9 11535031 11544992 + MGP_LPJ_P0090934 Cwc15 protein_coding protein_coding MGP_LPJ_T0015982.1 MGP_LPJ_G0014073.1 mouse_genomes_project 9 22693033 22693111 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099807.1 MGP_LPJ_G0038070.1 mouse_genomes_project 9 17482819 17482972 + Gm25914 snRNA snRNA MGP_LPJ_T0015994.1 MGP_LPJ_G0014085.1 mouse_genomes_project 9 36403957 36404992 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099825.1 MGP_LPJ_G0038088.1 mouse_genomes_project 9 50157960 50158066 + Gm25558 snRNA snRNA MGP_LPJ_T0093745.1 MGP_LPJ_G0035101.1 mouse_genomes_project 9 107081197 107082944 - MGP_LPJ_P0093745 1700080E11Rik protein_coding protein_coding MGP_LPJ_T0093746.1 MGP_LPJ_G0035101.1 mouse_genomes_project 9 107082163 107082928 - MGP_LPJ_P0093746 1700080E11Rik protein_coding protein_coding MGP_LPJ_T0091221.1 MGP_LPJ_G0034374.1 mouse_genomes_project 9 19517067 19532041 - MGP_LPJ_P0091221 Ecsit protein_coding protein_coding MGP_LPJ_T0091222.1 MGP_LPJ_G0034374.1 mouse_genomes_project 9 19517067 19532052 - MGP_LPJ_P0091222 Ecsit protein_coding protein_coding MGP_LPJ_T0091223.1 MGP_LPJ_G0034374.1 mouse_genomes_project 9 19517067 19532016 - MGP_LPJ_P0091223 Ecsit protein_coding protein_coding MGP_LPJ_T0091224.1 MGP_LPJ_G0034374.1 mouse_genomes_project 9 19518332 19532041 - MGP_LPJ_P0091224 Ecsit protein_coding protein_coding MGP_LPJ_T0093422.1 MGP_LPJ_G0035035.1 mouse_genomes_project 9 97642172 97767471 + MGP_LPJ_P0093422 Tfdp2 protein_coding protein_coding MGP_LPJ_T0093423.1 MGP_LPJ_G0035035.1 mouse_genomes_project 9 97642203 97768488 + MGP_LPJ_P0093423 Tfdp2 protein_coding protein_coding MGP_LPJ_T0093424.1 MGP_LPJ_G0035035.1 mouse_genomes_project 9 97642235 97693442 + Tfdp2 protein_coding processed_transcript MGP_LPJ_T0093425.1 MGP_LPJ_G0035035.1 mouse_genomes_project 9 97642306 97767478 + MGP_LPJ_P0093425 Tfdp2 protein_coding protein_coding MGP_LPJ_T0093426.1 MGP_LPJ_G0035035.1 mouse_genomes_project 9 97648000 97744750 + MGP_LPJ_P0093426 Tfdp2 protein_coding protein_coding MGP_LPJ_T0093427.1 MGP_LPJ_G0035035.1 mouse_genomes_project 9 97706526 97760093 + MGP_LPJ_P0093427 Tfdp2 protein_coding protein_coding MGP_LPJ_T0093428.1 MGP_LPJ_G0035035.1 mouse_genomes_project 9 97706563 97737507 + MGP_LPJ_P0093428 Tfdp2 protein_coding protein_coding MGP_LPJ_T0093429.1 MGP_LPJ_G0035035.1 mouse_genomes_project 9 97706580 97767474 + MGP_LPJ_P0093429 Tfdp2 protein_coding protein_coding MGP_LPJ_T0093430.1 MGP_LPJ_G0035035.1 mouse_genomes_project 9 97707112 97768412 + MGP_LPJ_P0093430 Tfdp2 protein_coding protein_coding MGP_LPJ_T0093431.1 MGP_LPJ_G0035035.1 mouse_genomes_project 9 97738154 97741305 + Tfdp2 protein_coding retained_intron MGP_LPJ_T0093432.1 MGP_LPJ_G0035035.1 mouse_genomes_project 9 97754728 97757855 + Tfdp2 protein_coding retained_intron MGP_LPJ_T0093433.1 MGP_LPJ_G0035035.1 mouse_genomes_project 9 97760076 97767410 + MGP_LPJ_P0093433 Tfdp2 protein_coding protein_coding MGP_LPJ_T0093689.1 MGP_LPJ_G0035091.1 mouse_genomes_project 9 105855047 105893381 + Nphp3 protein_coding retained_intron MGP_LPJ_T0093690.1 MGP_LPJ_G0035091.1 mouse_genomes_project 9 105855049 105897965 + MGP_LPJ_P0093690 Nphp3 protein_coding protein_coding MGP_LPJ_T0093691.1 MGP_LPJ_G0035091.1 mouse_genomes_project 9 105855157 105897256 + MGP_LPJ_P0093691 Nphp3 protein_coding protein_coding MGP_LPJ_T0093692.1 MGP_LPJ_G0035091.1 mouse_genomes_project 9 105855157 106017340 + MGP_LPJ_P0093692 Nphp3 protein_coding nonsense_mediated_decay MGP_LPJ_T0093693.1 MGP_LPJ_G0035091.1 mouse_genomes_project 9 105855261 105870435 + Nphp3 protein_coding retained_intron MGP_LPJ_T0093694.1 MGP_LPJ_G0035091.1 mouse_genomes_project 9 105855270 105896472 + MGP_LPJ_P0093694 Nphp3 protein_coding nonsense_mediated_decay MGP_LPJ_T0093695.1 MGP_LPJ_G0035091.1 mouse_genomes_project 9 105885522 105888077 + Nphp3 protein_coding retained_intron MGP_LPJ_T0093696.1 MGP_LPJ_G0035091.1 mouse_genomes_project 9 105889502 105892186 + MGP_LPJ_P0093696 Nphp3 protein_coding protein_coding MGP_LPJ_T0009333.1 MGP_LPJ_G0007499.1 mouse_genomes_project 9 103060385 103066194 + Gm28979 lincRNA lincRNA MGP_LPJ_T0094939.1 MGP_LPJ_G0035319.1 mouse_genomes_project 9 123196964 123220368 - MGP_LPJ_P0094939 Cx3cr1 protein_coding protein_coding MGP_LPJ_T0009340.1 MGP_LPJ_G0007505.1 mouse_genomes_project 9 106230156 106258684 + Gm28548 lincRNA lincRNA MGP_LPJ_T0016065.1 MGP_LPJ_G0014156.1 mouse_genomes_project 9 91409388 91409712 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016124.1 MGP_LPJ_G0014215.1 mouse_genomes_project 9 120369577 120374414 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016077.1 MGP_LPJ_G0014168.1 mouse_genomes_project 9 95752694 95753268 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005566.1 MGP_LPJ_G0004695.1 mouse_genomes_project 9 110045386 110046704 - Gm37974 antisense antisense MGP_LPJ_T0091585.1 MGP_LPJ_G0034521.1 mouse_genomes_project 9 37365790 37366909 - MGP_LPJ_P0091585 Olfr938 protein_coding protein_coding MGP_LPJ_T0101080.1 MGP_LPJ_G0039343.1 mouse_genomes_project 9 12412699 12412769 - Scarna9 snoRNA snoRNA MGP_LPJ_T0092070.1 MGP_LPJ_G0034695.1 mouse_genomes_project 9 50581061 50622703 - MGP_LPJ_P0092070 1810046K07Rik protein_coding protein_coding MGP_LPJ_T0092071.1 MGP_LPJ_G0034695.1 mouse_genomes_project 9 50581819 50606362 - MGP_LPJ_P0092071 1810046K07Rik protein_coding protein_coding MGP_LPJ_T0091756.1 MGP_LPJ_G0034598.1 mouse_genomes_project 9 43119646 43127313 - MGP_LPJ_P0091756 Hmbs protein_coding protein_coding MGP_LPJ_T0091757.1 MGP_LPJ_G0034598.1 mouse_genomes_project 9 43119646 43129143 - MGP_LPJ_P0091757 Hmbs protein_coding protein_coding MGP_LPJ_T0098691.1 MGP_LPJ_G0036959.1 mouse_genomes_project 9 110540891 110542015 + Gm37963 sense_intronic sense_intronic MGP_LPJ_T0092369.1 MGP_LPJ_G0034793.1 mouse_genomes_project 9 58912000 58946864 + MGP_LPJ_P0092369 Adpgk protein_coding protein_coding MGP_LPJ_T0092370.1 MGP_LPJ_G0034793.1 mouse_genomes_project 9 58912062 58945939 + MGP_LPJ_P0092370 Adpgk protein_coding unknown_likely_coding MGP_LPJ_T0091582.1 MGP_LPJ_G0034518.1 mouse_genomes_project 9 37308304 37309281 - MGP_LPJ_P0091582 Olfr146 protein_coding protein_coding MGP_LPJ_T0092570.1 MGP_LPJ_G0034844.1 mouse_genomes_project 9 65010291 65061029 + MGP_LPJ_P0092570 Dpp8 protein_coding protein_coding MGP_LPJ_T0092571.1 MGP_LPJ_G0034844.1 mouse_genomes_project 9 65010555 65059369 + MGP_LPJ_P0092571 Dpp8 protein_coding protein_coding MGP_LPJ_T0091773.1 MGP_LPJ_G0034606.1 mouse_genomes_project 9 43247496 43249564 - MGP_LPJ_P0091773 Upk2 protein_coding protein_coding MGP_LPJ_T0092885.1 MGP_LPJ_G0034913.1 mouse_genomes_project 9 73218380 73342938 + MGP_LPJ_P0092885 Prtg protein_coding protein_coding MGP_LPJ_T0092886.1 MGP_LPJ_G0034913.1 mouse_genomes_project 9 73336274 73337953 + Prtg protein_coding retained_intron MGP_LPJ_T0092588.1 MGP_LPJ_G0034854.1 mouse_genomes_project 9 65423155 65435615 - MGP_LPJ_P0092588 Slc51b protein_coding protein_coding MGP_LPJ_T0091988.1 MGP_LPJ_G0034677.1 mouse_genomes_project 9 49863391 49864811 + MGP_LPJ_P0091988 Timm8b protein_coding protein_coding MGP_LPJ_T0091553.1 MGP_LPJ_G0034495.1 mouse_genomes_project 9 36665003 36665939 + MGP_LPJ_P0091553 Olfr901 protein_coding protein_coding MGP_LPJ_T0005539.1 MGP_LPJ_G0004675.1 mouse_genomes_project 9 100912342 100918013 - 4930422M22Rik antisense antisense MGP_LPJ_T0092594.1 MGP_LPJ_G0034857.1 mouse_genomes_project 9 65514734 65530225 - MGP_LPJ_P0092594 Ankdd1a protein_coding protein_coding MGP_LPJ_T0092595.1 MGP_LPJ_G0034857.1 mouse_genomes_project 9 65514734 65534325 - MGP_LPJ_P0092595 Ankdd1a protein_coding unknown_likely_coding MGP_LPJ_T0091583.1 MGP_LPJ_G0034519.1 mouse_genomes_project 9 37333388 37334394 - MGP_LPJ_P0091583 Olfr936 protein_coding protein_coding MGP_LPJ_T0005549.1 MGP_LPJ_G0004683.1 mouse_genomes_project 9 108262190 108263854 + 4930500F10Rik antisense antisense MGP_LPJ_T0094600.1 MGP_LPJ_G0035234.1 mouse_genomes_project 9 112770816 112814287 + MGP_LPJ_P0094600 Scap protein_coding protein_coding MGP_LPJ_T0094601.1 MGP_LPJ_G0035234.1 mouse_genomes_project 9 112770824 112792206 + Scap protein_coding retained_intron MGP_LPJ_T0094602.1 MGP_LPJ_G0035234.1 mouse_genomes_project 9 112770884 112826150 + MGP_LPJ_P0094602 Scap protein_coding protein_coding MGP_LPJ_T0094603.1 MGP_LPJ_G0035234.1 mouse_genomes_project 9 112771078 112792054 + MGP_LPJ_P0094603 Scap protein_coding protein_coding MGP_LPJ_T0094604.1 MGP_LPJ_G0035234.1 mouse_genomes_project 9 112771164 112813519 + MGP_LPJ_P0094604 Scap protein_coding protein_coding MGP_LPJ_T0094605.1 MGP_LPJ_G0035234.1 mouse_genomes_project 9 112783088 112792054 + MGP_LPJ_P0094605 Scap protein_coding protein_coding MGP_LPJ_T0094606.1 MGP_LPJ_G0035234.1 mouse_genomes_project 9 112802308 112804809 + Scap protein_coding retained_intron MGP_LPJ_T0094607.1 MGP_LPJ_G0035234.1 mouse_genomes_project 9 112802741 112813488 + Scap protein_coding processed_transcript MGP_LPJ_T0094608.1 MGP_LPJ_G0035234.1 mouse_genomes_project 9 112815515 112817895 + Scap protein_coding retained_intron MGP_LPJ_T0094609.1 MGP_LPJ_G0035234.1 mouse_genomes_project 9 112819488 112819972 + Scap protein_coding retained_intron MGP_LPJ_T0009229.1 MGP_LPJ_G0007416.1 mouse_genomes_project 9 22766206 22766653 + Gm29375 lincRNA lincRNA MGP_LPJ_T0091651.1 MGP_LPJ_G0034564.1 mouse_genomes_project 9 39196932 39278104 + Clmp protein_coding processed_transcript MGP_LPJ_T0091652.1 MGP_LPJ_G0034564.1 mouse_genomes_project 9 39196983 39302326 + MGP_LPJ_P0091652 Clmp protein_coding protein_coding MGP_LPJ_T0091653.1 MGP_LPJ_G0034564.1 mouse_genomes_project 9 39197006 39278227 + Clmp protein_coding retained_intron MGP_LPJ_T0091654.1 MGP_LPJ_G0034564.1 mouse_genomes_project 9 39291451 39299439 + Clmp protein_coding processed_transcript MGP_LPJ_T0091124.1 MGP_LPJ_G0034336.1 mouse_genomes_project 9 18417911 18422603 - MGP_LPJ_P0091124 Zglp1 protein_coding protein_coding MGP_LPJ_T0092064.1 MGP_LPJ_G0034690.1 mouse_genomes_project 9 50334981 50356435 - MGP_LPJ_P0092064 Layn protein_coding protein_coding MGP_LPJ_T0092065.1 MGP_LPJ_G0034690.1 mouse_genomes_project 9 50335499 50356284 - MGP_LPJ_P0092065 Layn protein_coding unknown_likely_coding MGP_LPJ_T0095079.1 MGP_LPJ_G0035363.1 mouse_genomes_project 9 126510245 126516948 + MGP_LPJ_P0095079 Clec3b protein_coding protein_coding MGP_LPJ_T0092030.1 MGP_LPJ_G0034686.1 mouse_genomes_project 9 50028241 50032681 + Fdxacb1 protein_coding retained_intron MGP_LPJ_T0092031.1 MGP_LPJ_G0034686.1 mouse_genomes_project 9 50028254 50031603 + MGP_LPJ_P0092031 Fdxacb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0092032.1 MGP_LPJ_G0034686.1 mouse_genomes_project 9 50028287 50032619 + MGP_LPJ_P0092032 Fdxacb1 protein_coding protein_coding MGP_LPJ_T0092034.1 MGP_LPJ_G0034686.1 mouse_genomes_project 9 50030073 50031549 + MGP_LPJ_P0092034 Fdxacb1 protein_coding protein_coding MGP_LPJ_T0093295.1 MGP_LPJ_G0035011.1 mouse_genomes_project 9 91062115 91068038 + MGP_LPJ_P0093295 Rasgrf1 protein_coding protein_coding MGP_LPJ_T0093296.1 MGP_LPJ_G0035011.1 mouse_genomes_project 9 91062116 91068025 + MGP_LPJ_P0093296 Rasgrf1 protein_coding protein_coding MGP_LPJ_T0093297.1 MGP_LPJ_G0035011.1 mouse_genomes_project 9 91062116 91177861 + MGP_LPJ_P0093297 Rasgrf1 protein_coding protein_coding MGP_LPJ_T0093298.1 MGP_LPJ_G0035011.1 mouse_genomes_project 9 91062119 91081138 + Rasgrf1 protein_coding retained_intron MGP_LPJ_T0018462.1 MGP_LPJ_G0015652.1 mouse_genomes_project 9 38807570 38827911 + 1700110K17Rik processed_transcript processed_transcript MGP_LPJ_T0018463.1 MGP_LPJ_G0015652.1 mouse_genomes_project 9 38817645 38827905 + 1700110K17Rik processed_transcript processed_transcript MGP_LPJ_T0091980.1 MGP_LPJ_G0034671.1 mouse_genomes_project 9 49744488 49756270 + MGP_LPJ_P0091980 Plet1 protein_coding protein_coding MGP_LPJ_T0091981.1 MGP_LPJ_G0034671.1 mouse_genomes_project 9 49744490 49752780 + MGP_LPJ_P0091981 Plet1 protein_coding protein_coding MGP_LPJ_T0094833.1 MGP_LPJ_G0035288.1 mouse_genomes_project 9 118809340 118970334 + MGP_LPJ_P0094833 Gadl1 protein_coding protein_coding MGP_LPJ_T0095059.1 MGP_LPJ_G0035358.1 mouse_genomes_project 9 126297282 126370985 + MGP_LPJ_P0095059 Kif15 protein_coding protein_coding MGP_LPJ_T0002405.1 MGP_LPJ_G0002312.1 mouse_genomes_project 9 73294189 73296099 + TEC TEC MGP_LPJ_T0091565.1 MGP_LPJ_G0034507.1 mouse_genomes_project 9 36957185 36958133 - MGP_LPJ_P0091565 Olfr919 protein_coding protein_coding MGP_LPJ_T0099820.1 MGP_LPJ_G0038083.1 mouse_genomes_project 9 44533564 44533669 - Gm22069 snRNA snRNA MGP_LPJ_T0092222.1 MGP_LPJ_G0034750.1 mouse_genomes_project 9 56362655 56373857 - MGP_LPJ_P0092222 Snx33 protein_coding protein_coding MGP_LPJ_T0094681.1 MGP_LPJ_G0035251.1 mouse_genomes_project 9 113344792 113360762 - MGP_LPJ_P0094681 Tmie protein_coding protein_coding MGP_LPJ_T0094682.1 MGP_LPJ_G0035251.1 mouse_genomes_project 9 113356085 113359956 - Tmie protein_coding processed_transcript MGP_LPJ_T0094683.1 MGP_LPJ_G0035251.1 mouse_genomes_project 9 113356133 113356679 - Tmie protein_coding retained_intron MGP_LPJ_T0009247.1 MGP_LPJ_G0007431.1 mouse_genomes_project 9 39736395 39760950 + lincRNA lincRNA MGP_LPJ_T0009355.1 MGP_LPJ_G0007516.1 mouse_genomes_project 9 114064811 114069730 - Gm42523 lincRNA lincRNA MGP_LPJ_T0091772.1 MGP_LPJ_G0034605.1 mouse_genomes_project 9 43227381 43234049 - MGP_LPJ_P0091772 Foxr1 protein_coding protein_coding MGP_LPJ_T0091620.1 MGP_LPJ_G0034550.1 mouse_genomes_project 9 38446438 38447338 + MGP_LPJ_P0091620 protein_coding protein_coding MGP_LPJ_T0092225.1 MGP_LPJ_G0034753.1 mouse_genomes_project 9 56451499 56522935 + MGP_LPJ_P0092225 Ptpn9 protein_coding protein_coding MGP_LPJ_T0002380.1 MGP_LPJ_G0002287.1 mouse_genomes_project 9 32556929 32557840 + TEC TEC MGP_LPJ_T0016014.1 MGP_LPJ_G0014105.1 mouse_genomes_project 9 72299319 72299418 + processed_pseudogene processed_pseudogene MGP_LPJ_T0091239.1 MGP_LPJ_G0034384.1 mouse_genomes_project 9 19908655 19946081 + MGP_LPJ_P0091239 9530077C05Rik protein_coding protein_coding MGP_LPJ_T0099832.1 MGP_LPJ_G0038095.1 mouse_genomes_project 9 65193945 65194061 - Rnu5g snRNA snRNA MGP_LPJ_T0091225.1 MGP_LPJ_G0034375.1 mouse_genomes_project 9 19547187 19557510 + MGP_LPJ_P0091225 Cnn1 protein_coding protein_coding MGP_LPJ_T0009273.1 MGP_LPJ_G0007452.1 mouse_genomes_project 9 63977711 63981982 + 1110036E04Rik lincRNA lincRNA MGP_LPJ_T0091628.1 MGP_LPJ_G0034558.1 mouse_genomes_project 9 38627504 38630258 + MGP_LPJ_P0091628 Tmem225 protein_coding protein_coding MGP_LPJ_T0011078.1 MGP_LPJ_G0009196.1 mouse_genomes_project 9 43188297 43188363 + Mir7085 miRNA miRNA MGP_LPJ_T0011056.1 MGP_LPJ_G0009174.1 mouse_genomes_project 9 5176890 5176986 + Mir1899 miRNA miRNA MGP_LPJ_T0099869.1 MGP_LPJ_G0038132.1 mouse_genomes_project 9 117652223 117652327 + Gm23889 snRNA snRNA MGP_LPJ_T0016073.1 MGP_LPJ_G0014164.1 mouse_genomes_project 9 93879344 93879810 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101120.1 MGP_LPJ_G0039383.1 mouse_genomes_project 9 86464352 86464488 + Gm25125 snoRNA snoRNA MGP_LPJ_T0091593.1 MGP_LPJ_G0034529.1 mouse_genomes_project 9 37811672 37812693 + MGP_LPJ_P0091593 protein_coding protein_coding MGP_LPJ_T0095055.1 MGP_LPJ_G0035356.1 mouse_genomes_project 9 126267359 126275312 + MGP_LPJ_P0095055 Zfp105 protein_coding protein_coding MGP_LPJ_T0095056.1 MGP_LPJ_G0035356.1 mouse_genomes_project 9 126267386 126273962 + MGP_LPJ_P0095056 Zfp105 protein_coding protein_coding MGP_LPJ_T0016129.1 MGP_LPJ_G0014220.1 mouse_genomes_project 9 127216139 127216414 + processed_pseudogene processed_pseudogene MGP_LPJ_T0094123.1 MGP_LPJ_G0035159.1 mouse_genomes_project 9 109998480 110013467 + MGP_LPJ_P0094123 Mon1a protein_coding protein_coding MGP_LPJ_T0094124.1 MGP_LPJ_G0035159.1 mouse_genomes_project 9 109998511 110013472 + MGP_LPJ_P0094124 Mon1a protein_coding protein_coding MGP_LPJ_T0016033.1 MGP_LPJ_G0014124.1 mouse_genomes_project 9 77505060 77505358 - processed_pseudogene processed_pseudogene MGP_LPJ_T0094357.1 MGP_LPJ_G0035195.1 mouse_genomes_project 9 110734226 110740678 - MGP_LPJ_P0094357 Wdr6 protein_coding protein_coding MGP_LPJ_T0015974.1 MGP_LPJ_G0014065.1 mouse_genomes_project 9 11900118 11900466 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091111.1 MGP_LPJ_G0034328.1 mouse_genomes_project 9 18236758 18240754 + MGP_LPJ_P0091111 Ppan protein_coding protein_coding MGP_LPJ_T0091112.1 MGP_LPJ_G0034328.1 mouse_genomes_project 9 18236833 18238917 + Ppan protein_coding retained_intron MGP_LPJ_T0091113.1 MGP_LPJ_G0034328.1 mouse_genomes_project 9 18236850 18238258 + Ppan protein_coding retained_intron MGP_LPJ_T0091114.1 MGP_LPJ_G0034328.1 mouse_genomes_project 9 18236868 18240754 + Ppan protein_coding retained_intron MGP_LPJ_T0091115.1 MGP_LPJ_G0034328.1 mouse_genomes_project 9 18239213 18239930 + Ppan protein_coding retained_intron MGP_LPJ_T0091116.1 MGP_LPJ_G0034328.1 mouse_genomes_project 9 18239782 18240258 + Ppan protein_coding retained_intron MGP_LPJ_T0099804.1 MGP_LPJ_G0038067.1 mouse_genomes_project 9 10326847 10326954 + Gm26189 snRNA snRNA MGP_LPJ_T0093947.1 MGP_LPJ_G0035137.1 mouse_genomes_project 9 109360480 109366416 + MGP_LPJ_P0093947 Cish protein_coding protein_coding MGP_LPJ_T0093948.1 MGP_LPJ_G0035137.1 mouse_genomes_project 9 109361166 109367214 + MGP_LPJ_P0093948 Cish protein_coding protein_coding MGP_LPJ_T0093949.1 MGP_LPJ_G0035137.1 mouse_genomes_project 9 109361363 109366372 + Cish protein_coding processed_transcript MGP_LPJ_T0093950.1 MGP_LPJ_G0035137.1 mouse_genomes_project 9 109361368 109364980 + MGP_LPJ_P0093950 Cish protein_coding protein_coding MGP_LPJ_T0093951.1 MGP_LPJ_G0035137.1 mouse_genomes_project 9 109363584 109364887 + Cish protein_coding processed_transcript MGP_LPJ_T0092344.1 MGP_LPJ_G0034785.1 mouse_genomes_project 9 57856750 57882172 - MGP_LPJ_P0092344 Loxl1 protein_coding protein_coding MGP_LPJ_T0091598.1 MGP_LPJ_G0034534.1 mouse_genomes_project 9 37949024 37966079 - MGP_LPJ_P0091598 AW551984 protein_coding protein_coding MGP_LPJ_T0091599.1 MGP_LPJ_G0034534.1 mouse_genomes_project 9 37949138 37965597 - MGP_LPJ_P0091599 AW551984 protein_coding protein_coding MGP_LPJ_T0091600.1 MGP_LPJ_G0034534.1 mouse_genomes_project 9 37950590 37952645 - AW551984 protein_coding retained_intron MGP_LPJ_T0091601.1 MGP_LPJ_G0034534.1 mouse_genomes_project 9 37952250 37953895 - AW551984 protein_coding retained_intron MGP_LPJ_T0091602.1 MGP_LPJ_G0034534.1 mouse_genomes_project 9 37961522 37966358 - MGP_LPJ_P0091602 AW551984 protein_coding protein_coding MGP_LPJ_T0091603.1 MGP_LPJ_G0034534.1 mouse_genomes_project 9 37962159 37965537 - AW551984 protein_coding retained_intron MGP_LPJ_T0091604.1 MGP_LPJ_G0034534.1 mouse_genomes_project 9 37962420 37965287 - MGP_LPJ_P0091604 AW551984 protein_coding protein_coding MGP_LPJ_T0094443.1 MGP_LPJ_G0035208.1 mouse_genomes_project 9 111130062 111174236 + MGP_LPJ_P0094443 Pfkfb4 protein_coding protein_coding MGP_LPJ_T0094444.1 MGP_LPJ_G0035208.1 mouse_genomes_project 9 111130186 111174236 + MGP_LPJ_P0094444 Pfkfb4 protein_coding protein_coding MGP_LPJ_T0094445.1 MGP_LPJ_G0035208.1 mouse_genomes_project 9 111130232 111137554 + Pfkfb4 protein_coding retained_intron MGP_LPJ_T0094446.1 MGP_LPJ_G0035208.1 mouse_genomes_project 9 111130276 111131186 + Pfkfb4 protein_coding retained_intron MGP_LPJ_T0094447.1 MGP_LPJ_G0035208.1 mouse_genomes_project 9 111130300 111172720 + Pfkfb4 protein_coding retained_intron MGP_LPJ_T0094448.1 MGP_LPJ_G0035208.1 mouse_genomes_project 9 111130300 111172720 + MGP_LPJ_P0094448 Pfkfb4 protein_coding nonsense_mediated_decay MGP_LPJ_T0094449.1 MGP_LPJ_G0035208.1 mouse_genomes_project 9 111130300 111172720 + MGP_LPJ_P0094449 Pfkfb4 protein_coding nonsense_mediated_decay MGP_LPJ_T0094450.1 MGP_LPJ_G0035208.1 mouse_genomes_project 9 111137172 111149982 + Pfkfb4 protein_coding processed_transcript MGP_LPJ_T0094451.1 MGP_LPJ_G0035208.1 mouse_genomes_project 9 111150511 111170903 + MGP_LPJ_P0094451 Pfkfb4 protein_coding nonsense_mediated_decay MGP_LPJ_T0094452.1 MGP_LPJ_G0035208.1 mouse_genomes_project 9 111157822 111174205 + Pfkfb4 protein_coding processed_transcript MGP_LPJ_T0093248.1 MGP_LPJ_G0034999.1 mouse_genomes_project 9 89396134 89443037 + MGP_LPJ_P0093248 Nt5e protein_coding protein_coding MGP_LPJ_T0093249.1 MGP_LPJ_G0034999.1 mouse_genomes_project 9 89397397 89400981 + Nt5e protein_coding retained_intron MGP_LPJ_T0093250.1 MGP_LPJ_G0034999.1 mouse_genomes_project 9 89397412 89438764 + Nt5e protein_coding retained_intron MGP_LPJ_T0092433.1 MGP_LPJ_G0034810.1 mouse_genomes_project 9 61126253 61174451 + MGP_LPJ_P0092433 Tle3 protein_coding protein_coding MGP_LPJ_T0092434.1 MGP_LPJ_G0034810.1 mouse_genomes_project 9 61126270 61173863 + MGP_LPJ_P0092434 Tle3 protein_coding protein_coding MGP_LPJ_T0092435.1 MGP_LPJ_G0034810.1 mouse_genomes_project 9 61126745 61174441 + MGP_LPJ_P0092435 Tle3 protein_coding protein_coding MGP_LPJ_T0092436.1 MGP_LPJ_G0034810.1 mouse_genomes_project 9 61127106 61174440 + MGP_LPJ_P0092436 Tle3 protein_coding protein_coding MGP_LPJ_T0092437.1 MGP_LPJ_G0034810.1 mouse_genomes_project 9 61127268 61165307 + MGP_LPJ_P0092437 Tle3 protein_coding protein_coding MGP_LPJ_T0092438.1 MGP_LPJ_G0034810.1 mouse_genomes_project 9 61127272 61173795 + MGP_LPJ_P0092438 Tle3 protein_coding protein_coding MGP_LPJ_T0092439.1 MGP_LPJ_G0034810.1 mouse_genomes_project 9 61127303 61161382 + MGP_LPJ_P0092439 Tle3 protein_coding protein_coding MGP_LPJ_T0092440.1 MGP_LPJ_G0034810.1 mouse_genomes_project 9 61127304 61174444 + MGP_LPJ_P0092440 Tle3 protein_coding protein_coding MGP_LPJ_T0092441.1 MGP_LPJ_G0034810.1 mouse_genomes_project 9 61127325 61172678 + MGP_LPJ_P0092441 Tle3 protein_coding protein_coding MGP_LPJ_T0092442.1 MGP_LPJ_G0034810.1 mouse_genomes_project 9 61127369 61155825 + MGP_LPJ_P0092442 Tle3 protein_coding protein_coding MGP_LPJ_T0092443.1 MGP_LPJ_G0034810.1 mouse_genomes_project 9 61127401 61172938 + MGP_LPJ_P0092443 Tle3 protein_coding protein_coding MGP_LPJ_T0092444.1 MGP_LPJ_G0034810.1 mouse_genomes_project 9 61127422 61174034 + MGP_LPJ_P0092444 Tle3 protein_coding protein_coding MGP_LPJ_T0092445.1 MGP_LPJ_G0034810.1 mouse_genomes_project 9 61127559 61172938 + MGP_LPJ_P0092445 Tle3 protein_coding protein_coding MGP_LPJ_T0092446.1 MGP_LPJ_G0034810.1 mouse_genomes_project 9 61128217 61148566 + MGP_LPJ_P0092446 Tle3 protein_coding protein_coding MGP_LPJ_T0092447.1 MGP_LPJ_G0034810.1 mouse_genomes_project 9 61129412 61172938 + MGP_LPJ_P0092447 Tle3 protein_coding protein_coding MGP_LPJ_T0092448.1 MGP_LPJ_G0034810.1 mouse_genomes_project 9 61155791 61166076 + Tle3 protein_coding processed_transcript MGP_LPJ_T0092449.1 MGP_LPJ_G0034810.1 mouse_genomes_project 9 61156393 61173793 + Tle3 protein_coding retained_intron MGP_LPJ_T0092450.1 MGP_LPJ_G0034810.1 mouse_genomes_project 9 61165878 61174373 + Tle3 protein_coding processed_transcript MGP_LPJ_T0094378.1 MGP_LPJ_G0035198.1 mouse_genomes_project 9 110835157 110837463 + Slc25a20 protein_coding retained_intron MGP_LPJ_T0094379.1 MGP_LPJ_G0035198.1 mouse_genomes_project 9 110835167 110855863 + MGP_LPJ_P0094379 Slc25a20 protein_coding protein_coding MGP_LPJ_T0094380.1 MGP_LPJ_G0035198.1 mouse_genomes_project 9 110843768 110851866 + Slc25a20 protein_coding retained_intron MGP_LPJ_T0092933.1 MGP_LPJ_G0034926.1 mouse_genomes_project 9 75390116 75419853 + MGP_LPJ_P0092933 Onecut1 protein_coding protein_coding MGP_LPJ_T0092934.1 MGP_LPJ_G0034926.1 mouse_genomes_project 9 75394678 75418432 + Onecut1 protein_coding processed_transcript MGP_LPJ_T0016046.1 MGP_LPJ_G0014137.1 mouse_genomes_project 9 83935059 83935225 - processed_pseudogene processed_pseudogene MGP_LPJ_T0015991.1 MGP_LPJ_G0014082.1 mouse_genomes_project 9 34695326 34695525 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002384.1 MGP_LPJ_G0002291.1 mouse_genomes_project 9 55689814 55691383 + TEC TEC MGP_LPJ_T0101088.1 MGP_LPJ_G0039351.1 mouse_genomes_project 9 23178175 23178303 - Gm25346 snoRNA snoRNA MGP_LPJ_T0094807.1 MGP_LPJ_G0035273.1 mouse_genomes_project 9 117073706 117074150 + MGP_LPJ_P0094807 Bcl2a1c protein_coding protein_coding MGP_LPJ_T0093588.1 MGP_LPJ_G0035070.1 mouse_genomes_project 9 102675097 102730632 - MGP_LPJ_P0093588 Pccb protein_coding protein_coding MGP_LPJ_T0093589.1 MGP_LPJ_G0035070.1 mouse_genomes_project 9 102675097 102730611 - MGP_LPJ_P0093589 Pccb protein_coding protein_coding MGP_LPJ_T0093590.1 MGP_LPJ_G0035070.1 mouse_genomes_project 9 102677438 102678675 - Pccb protein_coding retained_intron MGP_LPJ_T0093591.1 MGP_LPJ_G0035070.1 mouse_genomes_project 9 102688649 102730600 - MGP_LPJ_P0093591 Pccb protein_coding protein_coding MGP_LPJ_T0093592.1 MGP_LPJ_G0035070.1 mouse_genomes_project 9 102705055 102730587 - Pccb protein_coding processed_transcript MGP_LPJ_T0093593.1 MGP_LPJ_G0035070.1 mouse_genomes_project 9 102717609 102730615 - MGP_LPJ_P0093593 Pccb protein_coding protein_coding MGP_LPJ_T0016028.1 MGP_LPJ_G0014119.1 mouse_genomes_project 9 75636581 75637124 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005524.1 MGP_LPJ_G0004666.1 mouse_genomes_project 9 97359417 97376570 - Gm16794 antisense antisense MGP_LPJ_T0005525.1 MGP_LPJ_G0004666.1 mouse_genomes_project 9 97360303 97371818 - Gm16794 antisense antisense MGP_LPJ_T0005526.1 MGP_LPJ_G0004666.1 mouse_genomes_project 9 97362354 97371827 - Gm16794 antisense antisense MGP_LPJ_T0005527.1 MGP_LPJ_G0004666.1 mouse_genomes_project 9 97363041 97372576 - Gm16794 antisense antisense MGP_LPJ_T0011099.1 MGP_LPJ_G0009217.1 mouse_genomes_project 9 71144210 71144292 - Gm25149 miRNA miRNA MGP_LPJ_T0005590.1 MGP_LPJ_G0004715.1 mouse_genomes_project 9 126986002 126987940 + Gm17120 antisense antisense MGP_LPJ_T0005483.1 MGP_LPJ_G0004638.1 mouse_genomes_project 9 57581142 57599136 + Gm16130 antisense antisense MGP_LPJ_T0093291.1 MGP_LPJ_G0035009.1 mouse_genomes_project 9 90845070 90850931 - MGP_LPJ_P0093291 Tmed3 protein_coding protein_coding MGP_LPJ_T0093292.1 MGP_LPJ_G0035009.1 mouse_genomes_project 9 90849108 90850686 - Tmed3 protein_coding retained_intron MGP_LPJ_T0091529.1 MGP_LPJ_G0034472.1 mouse_genomes_project 9 35941582 35942515 + MGP_LPJ_P0091529 Olfr874 protein_coding protein_coding MGP_LPJ_T0091125.1 MGP_LPJ_G0034337.1 mouse_genomes_project 9 18423029 18429361 - MGP_LPJ_P0091125 Fdx1l protein_coding protein_coding MGP_LPJ_T0099810.1 MGP_LPJ_G0038073.1 mouse_genomes_project 9 17782784 17782898 + Gm23316 snRNA snRNA MGP_LPJ_T0005552.1 MGP_LPJ_G0004686.1 mouse_genomes_project 9 108671958 108674582 + Gm28111 antisense antisense MGP_LPJ_T0095028.1 MGP_LPJ_G0035345.1 mouse_genomes_project 9 125240630 125254100 + MGP_LPJ_P0095028 1700048O20Rik protein_coding protein_coding MGP_LPJ_T0009259.1 MGP_LPJ_G0007440.1 mouse_genomes_project 9 52581444 52599760 + 4930510E17Rik lincRNA lincRNA MGP_LPJ_T0005519.1 MGP_LPJ_G0004665.1 mouse_genomes_project 9 97263069 97265169 - 1700065D16Rik antisense antisense MGP_LPJ_T0005520.1 MGP_LPJ_G0004665.1 mouse_genomes_project 9 97263071 97265523 - 1700065D16Rik antisense antisense MGP_LPJ_T0005521.1 MGP_LPJ_G0004665.1 mouse_genomes_project 9 97263071 97265974 - 1700065D16Rik antisense antisense MGP_LPJ_T0005522.1 MGP_LPJ_G0004665.1 mouse_genomes_project 9 97263072 97265523 - 1700065D16Rik antisense antisense MGP_LPJ_T0005523.1 MGP_LPJ_G0004665.1 mouse_genomes_project 9 97263203 97265972 - 1700065D16Rik antisense antisense MGP_LPJ_T0009322.1 MGP_LPJ_G0007489.1 mouse_genomes_project 9 97895060 97897415 - BC043934 lincRNA lincRNA MGP_LPJ_T0009323.1 MGP_LPJ_G0007489.1 mouse_genomes_project 9 97895061 97896711 - BC043934 lincRNA lincRNA MGP_LPJ_T0092100.1 MGP_LPJ_G0034708.1 mouse_genomes_project 9 52911691 52944648 - MGP_LPJ_P0092100 Acat1 protein_coding protein_coding MGP_LPJ_T0092101.1 MGP_LPJ_G0034708.1 mouse_genomes_project 9 52913656 52914927 - Acat1 protein_coding processed_transcript MGP_LPJ_T0092102.1 MGP_LPJ_G0034708.1 mouse_genomes_project 9 52928765 52944596 - Acat1 protein_coding retained_intron MGP_LPJ_T0009221.1 MGP_LPJ_G0007408.1 mouse_genomes_project 9 11900366 11902469 + Gm16302 lincRNA lincRNA MGP_LPJ_T0011105.1 MGP_LPJ_G0009223.1 mouse_genomes_project 9 93511495 93511599 - Mir6386 miRNA miRNA MGP_LPJ_T0094815.1 MGP_LPJ_G0035280.1 mouse_genomes_project 9 117374010 117427558 - MGP_LPJ_P0094815 Cnot10 protein_coding protein_coding MGP_LPJ_T0091027.1 MGP_LPJ_G0034287.1 mouse_genomes_project 9 16413445 16414400 + MGP_LPJ_P0091027 Olfr836 protein_coding protein_coding MGP_LPJ_T0093149.1 MGP_LPJ_G0034979.1 mouse_genomes_project 9 84257927 84296903 - MGP_LPJ_P0093149 Lca5 protein_coding nonsense_mediated_decay MGP_LPJ_T0093150.1 MGP_LPJ_G0034979.1 mouse_genomes_project 9 84259014 84312105 - MGP_LPJ_P0093150 Lca5 protein_coding protein_coding MGP_LPJ_T0093151.1 MGP_LPJ_G0034979.1 mouse_genomes_project 9 84261069 84312005 - MGP_LPJ_P0093151 Lca5 protein_coding protein_coding MGP_LPJ_T0093152.1 MGP_LPJ_G0034979.1 mouse_genomes_project 9 84270917 84272152 - Lca5 protein_coding retained_intron MGP_LPJ_T0093153.1 MGP_LPJ_G0034979.1 mouse_genomes_project 9 84292182 84312071 - Lca5 protein_coding retained_intron MGP_LPJ_T0093154.1 MGP_LPJ_G0034979.1 mouse_genomes_project 9 84293158 84305750 - MGP_LPJ_P0093154 Lca5 protein_coding protein_coding MGP_LPJ_T0093155.1 MGP_LPJ_G0034979.1 mouse_genomes_project 9 84293363 84296911 - Lca5 protein_coding retained_intron MGP_LPJ_T0093156.1 MGP_LPJ_G0034979.1 mouse_genomes_project 9 84296690 84312094 - MGP_LPJ_P0093156 Lca5 protein_coding protein_coding MGP_LPJ_T0093157.1 MGP_LPJ_G0034979.1 mouse_genomes_project 9 84296781 84312040 - Lca5 protein_coding processed_transcript MGP_LPJ_T0094485.1 MGP_LPJ_G0035214.1 mouse_genomes_project 9 111226922 111236939 + MGP_LPJ_P0094485 Ccdc51 protein_coding protein_coding MGP_LPJ_T0092211.1 MGP_LPJ_G0034744.1 mouse_genomes_project 9 55564390 55589809 - MGP_LPJ_P0092211 Tspan3 protein_coding protein_coding MGP_LPJ_T0093333.1 MGP_LPJ_G0035016.1 mouse_genomes_project 9 92587131 92595883 - MGP_LPJ_P0093333 Zic1 protein_coding protein_coding MGP_LPJ_T0093334.1 MGP_LPJ_G0035016.1 mouse_genomes_project 9 92589573 92595888 - MGP_LPJ_P0093334 Zic1 protein_coding protein_coding MGP_LPJ_T0093335.1 MGP_LPJ_G0035016.1 mouse_genomes_project 9 92591937 92593403 - Zic1 protein_coding processed_transcript MGP_LPJ_T0011098.1 MGP_LPJ_G0009216.1 mouse_genomes_project 9 70716049 70716109 - Mir5626 miRNA miRNA MGP_LPJ_T0015977.1 MGP_LPJ_G0014068.1 mouse_genomes_project 9 19988809 19989322 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091269.1 MGP_LPJ_G0034394.1 mouse_genomes_project 9 22699759 22744207 - MGP_LPJ_P0091269 Herpud2 protein_coding protein_coding MGP_LPJ_T0092919.1 MGP_LPJ_G0034922.1 mouse_genomes_project 9 73536277 73551503 + MGP_LPJ_P0092919 Gm20509 protein_coding protein_coding MGP_LPJ_T0005540.1 MGP_LPJ_G0004676.1 mouse_genomes_project 9 101341183 101382413 + Gm16004 antisense antisense MGP_LPJ_T0009302.1 MGP_LPJ_G0007475.1 mouse_genomes_project 9 84583528 84585270 + Gm2109 lincRNA lincRNA MGP_LPJ_T0093725.1 MGP_LPJ_G0035097.1 mouse_genomes_project 9 106155082 106205139 - MGP_LPJ_P0093725 Acpp protein_coding protein_coding MGP_LPJ_T0093726.1 MGP_LPJ_G0035097.1 mouse_genomes_project 9 106157815 106167992 - Acpp protein_coding processed_transcript MGP_LPJ_T0093727.1 MGP_LPJ_G0035097.1 mouse_genomes_project 9 106165766 106205118 - MGP_LPJ_P0093727 Acpp protein_coding protein_coding MGP_LPJ_T0093728.1 MGP_LPJ_G0035097.1 mouse_genomes_project 9 106173440 106205093 - Acpp protein_coding retained_intron MGP_LPJ_T0093729.1 MGP_LPJ_G0035097.1 mouse_genomes_project 9 106186533 106205118 - Acpp protein_coding retained_intron MGP_LPJ_T0002433.1 MGP_LPJ_G0002339.1 mouse_genomes_project 9 91335010 91338363 - TEC TEC MGP_LPJ_T0090829.1 MGP_LPJ_G0034214.1 mouse_genomes_project 9 3039221 3257395 + MGP_LPJ_P0090829 Pdgfd protein_coding protein_coding MGP_LPJ_T0090830.1 MGP_LPJ_G0034214.1 mouse_genomes_project 9 3039270 3258714 + MGP_LPJ_P0090830 Pdgfd protein_coding protein_coding MGP_LPJ_T0099816.1 MGP_LPJ_G0038079.1 mouse_genomes_project 9 39887366 39887472 - Gm25401 snRNA snRNA MGP_LPJ_T0091689.1 MGP_LPJ_G0034576.1 mouse_genomes_project 9 41776366 41786332 - MGP_LPJ_P0091689 Tmem136 protein_coding protein_coding MGP_LPJ_T0093915.1 MGP_LPJ_G0035132.1 mouse_genomes_project 9 108874614 108934434 + MGP_LPJ_P0093915 Vprbp protein_coding protein_coding MGP_LPJ_T0093916.1 MGP_LPJ_G0035132.1 mouse_genomes_project 9 108882911 108935378 + MGP_LPJ_P0093916 Vprbp protein_coding protein_coding MGP_LPJ_T0093918.1 MGP_LPJ_G0035132.1 mouse_genomes_project 9 108906326 108908525 + Vprbp protein_coding retained_intron MGP_LPJ_T0093920.1 MGP_LPJ_G0035132.1 mouse_genomes_project 9 108928711 108934600 + MGP_LPJ_P0093920 Vprbp protein_coding protein_coding MGP_LPJ_T0009243.1 MGP_LPJ_G0007428.1 mouse_genomes_project 9 34270120 34271453 - lincRNA lincRNA MGP_LPJ_T0009244.1 MGP_LPJ_G0007428.1 mouse_genomes_project 9 34270161 34271505 - lincRNA lincRNA MGP_LPJ_T0092679.1 MGP_LPJ_G0034877.1 mouse_genomes_project 9 66993825 67074538 - MGP_LPJ_P0092679 Rab8b protein_coding protein_coding MGP_LPJ_T0099868.1 MGP_LPJ_G0038131.1 mouse_genomes_project 9 117389696 117389801 - Gm23232 snRNA snRNA MGP_LPJ_T0094702.1 MGP_LPJ_G0035257.1 mouse_genomes_project 9 113507566 113529434 + MGP_LPJ_P0094702 Ltf protein_coding protein_coding MGP_LPJ_T0094703.1 MGP_LPJ_G0035257.1 mouse_genomes_project 9 113507587 113511595 + MGP_LPJ_P0094703 Ltf protein_coding protein_coding MGP_LPJ_T0094704.1 MGP_LPJ_G0035257.1 mouse_genomes_project 9 113507587 113531708 + MGP_LPJ_P0094704 Ltf protein_coding protein_coding MGP_LPJ_T0094705.1 MGP_LPJ_G0035257.1 mouse_genomes_project 9 113507587 113529434 + MGP_LPJ_P0094705 Ltf protein_coding protein_coding MGP_LPJ_T0094706.1 MGP_LPJ_G0035257.1 mouse_genomes_project 9 113507605 113514140 + MGP_LPJ_P0094706 Ltf protein_coding protein_coding MGP_LPJ_T0094707.1 MGP_LPJ_G0035257.1 mouse_genomes_project 9 113511547 113516548 + MGP_LPJ_P0094707 Ltf protein_coding nonsense_mediated_decay MGP_LPJ_T0094708.1 MGP_LPJ_G0035257.1 mouse_genomes_project 9 113513517 113514635 + Ltf protein_coding retained_intron MGP_LPJ_T0094709.1 MGP_LPJ_G0035257.1 mouse_genomes_project 9 113516249 113517621 + Ltf protein_coding retained_intron MGP_LPJ_T0094710.1 MGP_LPJ_G0035257.1 mouse_genomes_project 9 113516487 113524747 + MGP_LPJ_P0094710 Ltf protein_coding protein_coding MGP_LPJ_T0094711.1 MGP_LPJ_G0035257.1 mouse_genomes_project 9 113520067 113529418 + MGP_LPJ_P0094711 Ltf protein_coding nonsense_mediated_decay MGP_LPJ_T0094712.1 MGP_LPJ_G0035257.1 mouse_genomes_project 9 113524577 113529418 + Ltf protein_coding retained_intron MGP_LPJ_T0094713.1 MGP_LPJ_G0035257.1 mouse_genomes_project 9 113527745 113531267 + MGP_LPJ_P0094713 Ltf protein_coding protein_coding MGP_LPJ_T0094135.1 MGP_LPJ_G0035163.1 mouse_genomes_project 9 110060499 110081886 + Traip protein_coding retained_intron MGP_LPJ_T0094136.1 MGP_LPJ_G0035163.1 mouse_genomes_project 9 110061319 110082631 + MGP_LPJ_P0094136 Traip protein_coding protein_coding MGP_LPJ_T0094137.1 MGP_LPJ_G0035163.1 mouse_genomes_project 9 110061330 110068849 + Traip protein_coding processed_transcript MGP_LPJ_T0094138.1 MGP_LPJ_G0035163.1 mouse_genomes_project 9 110061351 110071407 + MGP_LPJ_P0094138 Traip protein_coding protein_coding MGP_LPJ_T0094139.1 MGP_LPJ_G0035163.1 mouse_genomes_project 9 110070752 110072023 + Traip protein_coding processed_transcript MGP_LPJ_T0094140.1 MGP_LPJ_G0035163.1 mouse_genomes_project 9 110072533 110079005 + Traip protein_coding retained_intron MGP_LPJ_T0094141.1 MGP_LPJ_G0035163.1 mouse_genomes_project 9 110072594 110079102 + Traip protein_coding retained_intron MGP_LPJ_T0091187.1 MGP_LPJ_G0034356.1 mouse_genomes_project 9 18976068 18980030 + MGP_LPJ_P0091187 1810026J23Rik protein_coding protein_coding MGP_LPJ_T0091159.1 MGP_LPJ_G0034351.1 mouse_genomes_project 9 18802525 18888429 + MGP_LPJ_P0091159 Dnm2 protein_coding protein_coding MGP_LPJ_T0091160.1 MGP_LPJ_G0034351.1 mouse_genomes_project 9 18802549 18887813 + MGP_LPJ_P0091160 Dnm2 protein_coding protein_coding MGP_LPJ_T0091161.1 MGP_LPJ_G0034351.1 mouse_genomes_project 9 18802562 18887815 + MGP_LPJ_P0091161 Dnm2 protein_coding protein_coding MGP_LPJ_T0091162.1 MGP_LPJ_G0034351.1 mouse_genomes_project 9 18802585 18845818 + MGP_LPJ_P0091162 Dnm2 protein_coding nonsense_mediated_decay MGP_LPJ_T0091163.1 MGP_LPJ_G0034351.1 mouse_genomes_project 9 18802588 18887801 + MGP_LPJ_P0091163 Dnm2 protein_coding protein_coding MGP_LPJ_T0091164.1 MGP_LPJ_G0034351.1 mouse_genomes_project 9 18802593 18887799 + MGP_LPJ_P0091164 Dnm2 protein_coding protein_coding MGP_LPJ_T0091165.1 MGP_LPJ_G0034351.1 mouse_genomes_project 9 18802713 18887077 + MGP_LPJ_P0091165 Dnm2 protein_coding protein_coding MGP_LPJ_T0091166.1 MGP_LPJ_G0034351.1 mouse_genomes_project 9 18802713 18871646 + MGP_LPJ_P0091166 Dnm2 protein_coding unknown_likely_coding MGP_LPJ_T0091167.1 MGP_LPJ_G0034351.1 mouse_genomes_project 9 18802860 18873213 + Dnm2 protein_coding processed_transcript MGP_LPJ_T0091168.1 MGP_LPJ_G0034351.1 mouse_genomes_project 9 18802861 18888429 + MGP_LPJ_P0091168 Dnm2 protein_coding protein_coding MGP_LPJ_T0091169.1 MGP_LPJ_G0034351.1 mouse_genomes_project 9 18834491 18834955 + Dnm2 protein_coding processed_transcript MGP_LPJ_T0091170.1 MGP_LPJ_G0034351.1 mouse_genomes_project 9 18854512 18881131 + MGP_LPJ_P0091170 Dnm2 protein_coding protein_coding MGP_LPJ_T0091171.1 MGP_LPJ_G0034351.1 mouse_genomes_project 9 18858334 18888434 + Dnm2 protein_coding retained_intron MGP_LPJ_T0091172.1 MGP_LPJ_G0034351.1 mouse_genomes_project 9 18875730 18885297 + Dnm2 protein_coding retained_intron MGP_LPJ_T0091173.1 MGP_LPJ_G0034351.1 mouse_genomes_project 9 18885781 18887074 + Dnm2 protein_coding processed_transcript MGP_LPJ_T0094473.1 MGP_LPJ_G0035211.1 mouse_genomes_project 9 111200405 111202207 - MGP_LPJ_P0094473 Trex1 protein_coding protein_coding MGP_LPJ_T0094475.1 MGP_LPJ_G0035211.1 mouse_genomes_project 9 111200410 111201724 - MGP_LPJ_P0094475 Trex1 protein_coding protein_coding MGP_LPJ_T0016053.1 MGP_LPJ_G0014144.1 mouse_genomes_project 9 87353711 87354255 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091727.1 MGP_LPJ_G0034589.1 mouse_genomes_project 9 42909852 43003442 - MGP_LPJ_P0091727 Cbl protein_coding protein_coding MGP_LPJ_T0091728.1 MGP_LPJ_G0034589.1 mouse_genomes_project 9 42909853 43003382 - MGP_LPJ_P0091728 Cbl protein_coding protein_coding MGP_LPJ_T0091729.1 MGP_LPJ_G0034589.1 mouse_genomes_project 9 42909858 42913233 - Cbl protein_coding processed_transcript MGP_LPJ_T0091730.1 MGP_LPJ_G0034589.1 mouse_genomes_project 9 42921030 43003377 - MGP_LPJ_P0091730 Cbl protein_coding protein_coding MGP_LPJ_T0091731.1 MGP_LPJ_G0034589.1 mouse_genomes_project 9 42922669 42923869 - MGP_LPJ_P0091731 Cbl protein_coding protein_coding MGP_LPJ_T0091732.1 MGP_LPJ_G0034589.1 mouse_genomes_project 9 42923228 42923842 - Cbl protein_coding retained_intron MGP_LPJ_T0091733.1 MGP_LPJ_G0034589.1 mouse_genomes_project 9 42923388 42927458 - Cbl protein_coding retained_intron MGP_LPJ_T0091734.1 MGP_LPJ_G0034589.1 mouse_genomes_project 9 42930450 42935014 - MGP_LPJ_P0091734 Cbl protein_coding protein_coding MGP_LPJ_T0091735.1 MGP_LPJ_G0034589.1 mouse_genomes_project 9 42941071 42958812 - Cbl protein_coding processed_transcript MGP_LPJ_T0091736.1 MGP_LPJ_G0034589.1 mouse_genomes_project 9 42945417 43002934 - MGP_LPJ_P0091736 Cbl protein_coding protein_coding MGP_LPJ_T0002449.1 MGP_LPJ_G0002355.1 mouse_genomes_project 9 100857561 100859316 - TEC TEC MGP_LPJ_T0098075.1 MGP_LPJ_G0036356.1 mouse_genomes_project 9 38081507 38082410 - pseudogene pseudogene MGP_LPJ_T0093873.1 MGP_LPJ_G0035122.1 mouse_genomes_project 9 108501861 108508458 - MGP_LPJ_P0093873 Parp3 protein_coding protein_coding MGP_LPJ_T0093874.1 MGP_LPJ_G0035122.1 mouse_genomes_project 9 108502161 108507885 - MGP_LPJ_P0093874 Parp3 protein_coding protein_coding MGP_LPJ_T0093875.1 MGP_LPJ_G0035122.1 mouse_genomes_project 9 108502523 108507678 - Parp3 protein_coding retained_intron MGP_LPJ_T0093876.1 MGP_LPJ_G0035122.1 mouse_genomes_project 9 108502523 108508178 - MGP_LPJ_P0093876 Parp3 protein_coding protein_coding MGP_LPJ_T0093877.1 MGP_LPJ_G0035122.1 mouse_genomes_project 9 108502529 108503557 - Parp3 protein_coding retained_intron MGP_LPJ_T0093878.1 MGP_LPJ_G0035122.1 mouse_genomes_project 9 108505956 108507613 - MGP_LPJ_P0093878 Parp3 protein_coding protein_coding MGP_LPJ_T0093879.1 MGP_LPJ_G0035122.1 mouse_genomes_project 9 108506163 108508105 - Parp3 protein_coding retained_intron MGP_LPJ_T0093880.1 MGP_LPJ_G0035122.1 mouse_genomes_project 9 108506193 108507904 - MGP_LPJ_P0093880 Parp3 protein_coding protein_coding MGP_LPJ_T0099803.1 MGP_LPJ_G0038066.1 mouse_genomes_project 9 6209180 6209242 + Gm22815 snRNA snRNA MGP_LPJ_T0101099.1 MGP_LPJ_G0039362.1 mouse_genomes_project 9 43558652 43558787 - Gm24166 snoRNA snoRNA MGP_LPJ_T0005513.1 MGP_LPJ_G0004659.1 mouse_genomes_project 9 82585039 82679498 - Gm26907 antisense antisense MGP_LPJ_T0091825.1 MGP_LPJ_G0034618.1 mouse_genomes_project 9 43752372 43796256 - MGP_LPJ_P0091825 Ube4a protein_coding protein_coding MGP_LPJ_T0091826.1 MGP_LPJ_G0034618.1 mouse_genomes_project 9 43755089 43796296 - MGP_LPJ_P0091826 Ube4a protein_coding protein_coding MGP_LPJ_T0091827.1 MGP_LPJ_G0034618.1 mouse_genomes_project 9 43763271 43796215 - MGP_LPJ_P0091827 Ube4a protein_coding nonsense_mediated_decay MGP_LPJ_T0091828.1 MGP_LPJ_G0034618.1 mouse_genomes_project 9 43763372 43796221 - MGP_LPJ_P0091828 Ube4a protein_coding nonsense_mediated_decay MGP_LPJ_T0091829.1 MGP_LPJ_G0034618.1 mouse_genomes_project 9 43776228 43796253 - Ube4a protein_coding retained_intron MGP_LPJ_T0091830.1 MGP_LPJ_G0034618.1 mouse_genomes_project 9 43783105 43796250 - MGP_LPJ_P0091830 Ube4a protein_coding protein_coding MGP_LPJ_T0091831.1 MGP_LPJ_G0034618.1 mouse_genomes_project 9 43787335 43796232 - Ube4a protein_coding retained_intron MGP_LPJ_T0092432.1 MGP_LPJ_G0034809.1 mouse_genomes_project 9 60551264 60567429 - MGP_LPJ_P0092432 Gm9869 protein_coding protein_coding MGP_LPJ_T0093272.1 MGP_LPJ_G0035003.1 mouse_genomes_project 9 89631095 89664280 + MGP_LPJ_P0093272 Zfp949 protein_coding protein_coding MGP_LPJ_T0093273.1 MGP_LPJ_G0035003.1 mouse_genomes_project 9 89631119 89659541 + MGP_LPJ_P0093273 Zfp949 protein_coding protein_coding MGP_LPJ_T0093274.1 MGP_LPJ_G0035003.1 mouse_genomes_project 9 89631160 89660438 + Zfp949 protein_coding retained_intron MGP_LPJ_T0093275.1 MGP_LPJ_G0035003.1 mouse_genomes_project 9 89631175 89638952 + MGP_LPJ_P0093275 Zfp949 protein_coding protein_coding MGP_LPJ_T0093276.1 MGP_LPJ_G0035003.1 mouse_genomes_project 9 89631258 89664280 + MGP_LPJ_P0093276 Zfp949 protein_coding protein_coding MGP_LPJ_T0092261.1 MGP_LPJ_G0034757.1 mouse_genomes_project 9 56618926 56622185 - MGP_LPJ_P0092261 Commd4 protein_coding protein_coding MGP_LPJ_T0016006.1 MGP_LPJ_G0014097.1 mouse_genomes_project 9 59433254 59433741 - processed_pseudogene processed_pseudogene MGP_LPJ_T0093060.1 MGP_LPJ_G0034962.1 mouse_genomes_project 9 79164290 79178177 - MGP_LPJ_P0093060 Mb21d1 protein_coding protein_coding MGP_LPJ_T0093061.1 MGP_LPJ_G0034962.1 mouse_genomes_project 9 79166345 79178210 - MGP_LPJ_P0093061 Mb21d1 protein_coding protein_coding MGP_LPJ_T0093062.1 MGP_LPJ_G0034962.1 mouse_genomes_project 9 79166795 79177858 - MGP_LPJ_P0093062 Mb21d1 protein_coding nonsense_mediated_decay MGP_LPJ_T0016067.1 MGP_LPJ_G0014158.1 mouse_genomes_project 9 91915933 91916225 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005473.1 MGP_LPJ_G0004633.1 mouse_genomes_project 9 53617713 53650423 - Gldnos antisense antisense MGP_LPJ_T0093649.1 MGP_LPJ_G0035083.1 mouse_genomes_project 9 105000794 105015735 - MGP_LPJ_P0093649 Srprb protein_coding protein_coding MGP_LPJ_T0093650.1 MGP_LPJ_G0035083.1 mouse_genomes_project 9 105001852 105015727 - Srprb protein_coding retained_intron MGP_LPJ_T0093652.1 MGP_LPJ_G0035083.1 mouse_genomes_project 9 105003114 105005025 - Srprb protein_coding processed_transcript MGP_LPJ_T0094007.1 MGP_LPJ_G0035148.1 mouse_genomes_project 9 109658606 109663385 + MGP_LPJ_P0094007 Hyal1 protein_coding protein_coding MGP_LPJ_T0094008.1 MGP_LPJ_G0035148.1 mouse_genomes_project 9 109658617 109661238 + MGP_LPJ_P0094008 Hyal1 protein_coding protein_coding MGP_LPJ_T0094009.1 MGP_LPJ_G0035148.1 mouse_genomes_project 9 109658637 109662658 + MGP_LPJ_P0094009 Hyal1 protein_coding protein_coding MGP_LPJ_T0094010.1 MGP_LPJ_G0035148.1 mouse_genomes_project 9 109658669 109661094 + MGP_LPJ_P0094010 Hyal1 protein_coding protein_coding MGP_LPJ_T0094017.1 MGP_LPJ_G0035148.1 mouse_genomes_project 9 109661272 109663351 + Hyal1 protein_coding retained_intron MGP_LPJ_T0091546.1 MGP_LPJ_G0034488.1 mouse_genomes_project 9 36445675 36446743 + MGP_LPJ_P0091546 Olfr894 protein_coding protein_coding MGP_LPJ_T0093530.1 MGP_LPJ_G0035059.1 mouse_genomes_project 9 100998975 101052450 - MGP_LPJ_P0093530 Mras protein_coding protein_coding MGP_LPJ_T0093531.1 MGP_LPJ_G0035059.1 mouse_genomes_project 9 101001484 101051950 - MGP_LPJ_P0093531 Mras protein_coding protein_coding MGP_LPJ_T0093532.1 MGP_LPJ_G0035059.1 mouse_genomes_project 9 101001535 101040994 - MGP_LPJ_P0093532 Mras protein_coding protein_coding MGP_LPJ_T0093533.1 MGP_LPJ_G0035059.1 mouse_genomes_project 9 101003289 101008252 - Mras protein_coding retained_intron MGP_LPJ_T0093534.1 MGP_LPJ_G0035059.1 mouse_genomes_project 9 101006396 101014854 - Mras protein_coding retained_intron MGP_LPJ_T0093535.1 MGP_LPJ_G0035059.1 mouse_genomes_project 9 101006557 101035254 - MGP_LPJ_P0093535 Mras protein_coding protein_coding MGP_LPJ_T0091697.1 MGP_LPJ_G0034583.1 mouse_genomes_project 9 42795416 42801147 + MGP_LPJ_P0091697 Thy1 protein_coding protein_coding MGP_LPJ_T0009335.1 MGP_LPJ_G0007501.1 mouse_genomes_project 9 104328244 104339256 + Gm29387 lincRNA lincRNA MGP_LPJ_T0091051.1 MGP_LPJ_G0034311.1 mouse_genomes_project 9 17546894 17568757 + MGP_LPJ_P0091051 protein_coding protein_coding MGP_LPJ_T0011754.1 MGP_LPJ_G0009872.1 mouse_genomes_project 9 78873710 78874041 - Rn7sk misc_RNA misc_RNA MGP_LPJ_T0011106.1 MGP_LPJ_G0009224.1 mouse_genomes_project 9 96101544 96101606 + Mir7656 miRNA miRNA MGP_LPJ_T0015981.1 MGP_LPJ_G0014072.1 mouse_genomes_project 9 22405478 22406472 - processed_pseudogene processed_pseudogene MGP_LPJ_T0094875.1 MGP_LPJ_G0035298.1 mouse_genomes_project 9 122114554 122134736 + Vill protein_coding retained_intron MGP_LPJ_T0094876.1 MGP_LPJ_G0035298.1 mouse_genomes_project 9 122114554 122119832 + Vill protein_coding retained_intron MGP_LPJ_T0094877.1 MGP_LPJ_G0035298.1 mouse_genomes_project 9 122114554 122134730 + MGP_LPJ_P0094877 Vill protein_coding protein_coding MGP_LPJ_T0094878.1 MGP_LPJ_G0035298.1 mouse_genomes_project 9 122114578 122134537 + MGP_LPJ_P0094878 Vill protein_coding protein_coding MGP_LPJ_T0094879.1 MGP_LPJ_G0035298.1 mouse_genomes_project 9 122114641 122120203 + MGP_LPJ_P0094879 Vill protein_coding protein_coding MGP_LPJ_T0094880.1 MGP_LPJ_G0035298.1 mouse_genomes_project 9 122125106 122134537 + MGP_LPJ_P0094880 Vill protein_coding protein_coding MGP_LPJ_T0094881.1 MGP_LPJ_G0035298.1 mouse_genomes_project 9 122125112 122134548 + MGP_LPJ_P0094881 Vill protein_coding protein_coding MGP_LPJ_T0094882.1 MGP_LPJ_G0035298.1 mouse_genomes_project 9 122125113 122131724 + MGP_LPJ_P0094882 Vill protein_coding nonsense_mediated_decay MGP_LPJ_T0094883.1 MGP_LPJ_G0035298.1 mouse_genomes_project 9 122125116 122128474 + MGP_LPJ_P0094883 Vill protein_coding protein_coding MGP_LPJ_T0094884.1 MGP_LPJ_G0035298.1 mouse_genomes_project 9 122125140 122127002 + Vill protein_coding processed_transcript MGP_LPJ_T0091536.1 MGP_LPJ_G0034479.1 mouse_genomes_project 9 36234464 36235394 + MGP_LPJ_P0091536 Olfr883 protein_coding protein_coding MGP_LPJ_T0016071.1 MGP_LPJ_G0014162.1 mouse_genomes_project 9 93585594 93586122 - processed_pseudogene processed_pseudogene MGP_LPJ_T0005536.1 MGP_LPJ_G0004673.1 mouse_genomes_project 9 99546106 99554853 + 4921534H16Rik antisense antisense MGP_LPJ_T0005537.1 MGP_LPJ_G0004673.1 mouse_genomes_project 9 99546106 99548456 + 4921534H16Rik antisense antisense MGP_LPJ_T0092771.1 MGP_LPJ_G0034896.1 mouse_genomes_project 9 70868250 70924516 + MGP_LPJ_P0092771 Sltm protein_coding protein_coding MGP_LPJ_T0002485.1 MGP_LPJ_G0002391.1 mouse_genomes_project 9 110622670 110623684 + TEC TEC MGP_LPJ_T0090809.1 MGP_LPJ_G0034206.1 mouse_genomes_project 9 232866 610558 + MGP_LPJ_P0090809 Gucy1a2 protein_coding protein_coding MGP_LPJ_T0018448.1 MGP_LPJ_G0015647.1 mouse_genomes_project 9 4889035 4900309 + Gm20416 processed_transcript processed_transcript MGP_LPJ_T0098326.1 MGP_LPJ_G0036607.1 mouse_genomes_project 9 9812168 9812289 + Gm25365 rRNA rRNA MGP_LPJ_T0101077.1 MGP_LPJ_G0039340.1 mouse_genomes_project 9 12400190 12400264 + Gm24357 snoRNA snoRNA MGP_LPJ_T0011080.1 MGP_LPJ_G0009198.1 mouse_genomes_project 9 44861462 44861532 - Mir7087 miRNA miRNA MGP_LPJ_T0009329.1 MGP_LPJ_G0007495.1 mouse_genomes_project 9 100980712 100982162 + Gm28087 lincRNA lincRNA MGP_LPJ_T0093439.1 MGP_LPJ_G0035038.1 mouse_genomes_project 9 98010995 98105056 - MGP_LPJ_P0093439 Rasa2 protein_coding protein_coding MGP_LPJ_T0093440.1 MGP_LPJ_G0035038.1 mouse_genomes_project 9 98014000 98016666 - Rasa2 protein_coding retained_intron MGP_LPJ_T0093441.1 MGP_LPJ_G0035038.1 mouse_genomes_project 9 98017768 98104975 - MGP_LPJ_P0093441 Rasa2 protein_coding nonsense_mediated_decay MGP_LPJ_T0093442.1 MGP_LPJ_G0035038.1 mouse_genomes_project 9 98029202 98044496 - Rasa2 protein_coding retained_intron MGP_LPJ_T0093443.1 MGP_LPJ_G0035038.1 mouse_genomes_project 9 98029908 98036487 - Rasa2 protein_coding retained_intron MGP_LPJ_T0093444.1 MGP_LPJ_G0035038.1 mouse_genomes_project 9 98044340 98053059 - Rasa2 protein_coding retained_intron MGP_LPJ_T0101138.1 MGP_LPJ_G0039401.1 mouse_genomes_project 9 112547093 112547231 - Gm23377 snoRNA snoRNA MGP_LPJ_T0011057.1 MGP_LPJ_G0009175.1 mouse_genomes_project 9 6617743 6617844 - Gm26195 miRNA miRNA MGP_LPJ_T0101111.1 MGP_LPJ_G0039374.1 mouse_genomes_project 9 68502530 68502660 + Gm22382 snoRNA snoRNA MGP_LPJ_T0098074.1 MGP_LPJ_G0036355.1 mouse_genomes_project 9 36758156 36759088 + pseudogene pseudogene MGP_LPJ_T0091054.1 MGP_LPJ_G0034314.1 mouse_genomes_project 9 17622545 17643918 - MGP_LPJ_P0091054 Olfr18 protein_coding protein_coding MGP_LPJ_T0092519.1 MGP_LPJ_G0034831.1 mouse_genomes_project 9 64069907 64108364 - MGP_LPJ_P0092519 Zwilch protein_coding protein_coding MGP_LPJ_T0092520.1 MGP_LPJ_G0034831.1 mouse_genomes_project 9 64070432 64108118 - MGP_LPJ_P0092520 Zwilch protein_coding protein_coding MGP_LPJ_T0092521.1 MGP_LPJ_G0034831.1 mouse_genomes_project 9 64070475 64078209 - Zwilch protein_coding retained_intron MGP_LPJ_T0092522.1 MGP_LPJ_G0034831.1 mouse_genomes_project 9 64073968 64108154 - MGP_LPJ_P0092522 Zwilch protein_coding protein_coding MGP_LPJ_T0092523.1 MGP_LPJ_G0034831.1 mouse_genomes_project 9 64074045 64084062 - MGP_LPJ_P0092523 Zwilch protein_coding nonsense_mediated_decay MGP_LPJ_T0092524.1 MGP_LPJ_G0034831.1 mouse_genomes_project 9 64074047 64081331 - MGP_LPJ_P0092524 Zwilch protein_coding nonsense_mediated_decay MGP_LPJ_T0092525.1 MGP_LPJ_G0034831.1 mouse_genomes_project 9 64078181 64089308 - Zwilch protein_coding retained_intron MGP_LPJ_T0092526.1 MGP_LPJ_G0034831.1 mouse_genomes_project 9 64081347 64089556 - Zwilch protein_coding retained_intron MGP_LPJ_T0092527.1 MGP_LPJ_G0034831.1 mouse_genomes_project 9 64088993 64108173 - MGP_LPJ_P0092527 Zwilch protein_coding protein_coding MGP_LPJ_T0092528.1 MGP_LPJ_G0034831.1 mouse_genomes_project 9 64094674 64108166 - MGP_LPJ_P0092528 Zwilch protein_coding nonsense_mediated_decay MGP_LPJ_T0092529.1 MGP_LPJ_G0034831.1 mouse_genomes_project 9 64095088 64108148 - MGP_LPJ_P0092529 Zwilch protein_coding protein_coding MGP_LPJ_T0092530.1 MGP_LPJ_G0034831.1 mouse_genomes_project 9 64096376 64108150 - MGP_LPJ_P0092530 Zwilch protein_coding nonsense_mediated_decay MGP_LPJ_T0092531.1 MGP_LPJ_G0034831.1 mouse_genomes_project 9 64102071 64108163 - Zwilch protein_coding retained_intron MGP_LPJ_T0090882.1 MGP_LPJ_G0034231.1 mouse_genomes_project 9 4946778 4968789 - MGP_LPJ_P0090882 9230110C19Rik protein_coding protein_coding MGP_LPJ_T0092774.1 MGP_LPJ_G0034899.1 mouse_genomes_project 9 71016754 71120178 + MGP_LPJ_P0092774 Adam10 protein_coding nonsense_mediated_decay MGP_LPJ_T0092775.1 MGP_LPJ_G0034899.1 mouse_genomes_project 9 71016754 71122025 + MGP_LPJ_P0092775 Adam10 protein_coding protein_coding MGP_LPJ_T0092776.1 MGP_LPJ_G0034899.1 mouse_genomes_project 9 71016773 71087566 + MGP_LPJ_P0092776 Adam10 protein_coding protein_coding MGP_LPJ_T0092777.1 MGP_LPJ_G0034899.1 mouse_genomes_project 9 71117849 71120174 + Adam10 protein_coding retained_intron MGP_LPJ_T0091208.1 MGP_LPJ_G0034366.1 mouse_genomes_project 9 19352398 19368523 + MGP_LPJ_P0091208 Plppr2 protein_coding protein_coding MGP_LPJ_T0091209.1 MGP_LPJ_G0034366.1 mouse_genomes_project 9 19354340 19367629 + MGP_LPJ_P0091209 Plppr2 protein_coding protein_coding MGP_LPJ_T0011109.1 MGP_LPJ_G0009227.1 mouse_genomes_project 9 106925790 106925894 + Gm23391 miRNA miRNA MGP_LPJ_T0099809.1 MGP_LPJ_G0038072.1 mouse_genomes_project 9 17560745 17560841 - Gm25425 snRNA snRNA MGP_LPJ_T0092007.1 MGP_LPJ_G0034681.1 mouse_genomes_project 9 49919698 49956573 - MGP_LPJ_P0092007 Dixdc1 protein_coding unknown_likely_coding MGP_LPJ_T0092008.1 MGP_LPJ_G0034681.1 mouse_genomes_project 9 49919701 49985610 - MGP_LPJ_P0092008 Dixdc1 protein_coding protein_coding MGP_LPJ_T0092009.1 MGP_LPJ_G0034681.1 mouse_genomes_project 9 49919705 49957350 - Dixdc1 protein_coding retained_intron MGP_LPJ_T0092010.1 MGP_LPJ_G0034681.1 mouse_genomes_project 9 49919705 49985702 - MGP_LPJ_P0092010 Dixdc1 protein_coding protein_coding MGP_LPJ_T0092011.1 MGP_LPJ_G0034681.1 mouse_genomes_project 9 49923142 49954752 - Dixdc1 protein_coding processed_transcript MGP_LPJ_T0092012.1 MGP_LPJ_G0034681.1 mouse_genomes_project 9 49923142 49996948 - MGP_LPJ_P0092012 Dixdc1 protein_coding protein_coding MGP_LPJ_T0092013.1 MGP_LPJ_G0034681.1 mouse_genomes_project 9 49923206 49942620 - Dixdc1 protein_coding retained_intron MGP_LPJ_T0092014.1 MGP_LPJ_G0034681.1 mouse_genomes_project 9 49934916 49951814 - MGP_LPJ_P0092014 Dixdc1 protein_coding protein_coding MGP_LPJ_T0092015.1 MGP_LPJ_G0034681.1 mouse_genomes_project 9 49948148 49957425 - Dixdc1 protein_coding processed_transcript MGP_LPJ_T0092016.1 MGP_LPJ_G0034681.1 mouse_genomes_project 9 49951482 49956628 - Dixdc1 protein_coding retained_intron MGP_LPJ_T0092017.1 MGP_LPJ_G0034681.1 mouse_genomes_project 9 49951660 49955764 - Dixdc1 protein_coding processed_transcript MGP_LPJ_T0092018.1 MGP_LPJ_G0034681.1 mouse_genomes_project 9 49967271 49996878 - MGP_LPJ_P0092018 Dixdc1 protein_coding protein_coding MGP_LPJ_T0092019.1 MGP_LPJ_G0034681.1 mouse_genomes_project 9 49967775 49985573 - MGP_LPJ_P0092019 Dixdc1 protein_coding protein_coding MGP_LPJ_T0005543.1 MGP_LPJ_G0004679.1 mouse_genomes_project 9 107150703 107155172 + Gm20643 antisense antisense MGP_LPJ_T0094990.1 MGP_LPJ_G0035334.1 mouse_genomes_project 9 124928246 124959414 + MGP_LPJ_P0094990 Vipr1 protein_coding protein_coding MGP_LPJ_T0094991.1 MGP_LPJ_G0035334.1 mouse_genomes_project 9 124928581 124946737 + Vipr1 protein_coding processed_transcript MGP_LPJ_T0094992.1 MGP_LPJ_G0035334.1 mouse_genomes_project 9 124951074 124952367 + Vipr1 protein_coding retained_intron MGP_LPJ_T0094993.1 MGP_LPJ_G0035334.1 mouse_genomes_project 9 124955172 124955969 + Vipr1 protein_coding retained_intron MGP_LPJ_T0094072.1 MGP_LPJ_G0035156.1 mouse_genomes_project 9 109769075 109801332 - MGP_LPJ_P0094072 Sema3f protein_coding protein_coding MGP_LPJ_T0094073.1 MGP_LPJ_G0035156.1 mouse_genomes_project 9 109769994 109796414 - MGP_LPJ_P0094073 Sema3f protein_coding protein_coding MGP_LPJ_T0094074.1 MGP_LPJ_G0035156.1 mouse_genomes_project 9 109770698 109772339 - Sema3f protein_coding retained_intron MGP_LPJ_T0094075.1 MGP_LPJ_G0035156.1 mouse_genomes_project 9 109770698 109800876 - MGP_LPJ_P0094075 Sema3f protein_coding nonsense_mediated_decay MGP_LPJ_T0094076.1 MGP_LPJ_G0035156.1 mouse_genomes_project 9 109771568 109776688 - MGP_LPJ_P0094076 Sema3f protein_coding nonsense_mediated_decay MGP_LPJ_T0094077.1 MGP_LPJ_G0035156.1 mouse_genomes_project 9 109771584 109772375 - Sema3f protein_coding retained_intron MGP_LPJ_T0094078.1 MGP_LPJ_G0035156.1 mouse_genomes_project 9 109771707 109772349 - Sema3f protein_coding retained_intron MGP_LPJ_T0094079.1 MGP_LPJ_G0035156.1 mouse_genomes_project 9 109776645 109783613 - Sema3f protein_coding processed_transcript MGP_LPJ_T0094080.1 MGP_LPJ_G0035156.1 mouse_genomes_project 9 109777112 109783541 - MGP_LPJ_P0094080 Sema3f protein_coding protein_coding MGP_LPJ_T0094081.1 MGP_LPJ_G0035156.1 mouse_genomes_project 9 109777126 109780818 - Sema3f protein_coding retained_intron MGP_LPJ_T0094082.1 MGP_LPJ_G0035156.1 mouse_genomes_project 9 109777696 109800337 - MGP_LPJ_P0094082 Sema3f protein_coding protein_coding MGP_LPJ_T0094083.1 MGP_LPJ_G0035156.1 mouse_genomes_project 9 109780586 109783602 - MGP_LPJ_P0094083 Sema3f protein_coding protein_coding MGP_LPJ_T0016117.1 MGP_LPJ_G0014208.1 mouse_genomes_project 9 110721984 110727435 + processed_pseudogene processed_pseudogene MGP_LPJ_T0005567.1 MGP_LPJ_G0004696.1 mouse_genomes_project 9 110102429 110106402 - 4921523L03Rik antisense antisense MGP_LPJ_T0099847.1 MGP_LPJ_G0038110.1 mouse_genomes_project 9 83280941 83281002 - Gm22836 snRNA snRNA MGP_LPJ_T0005587.1 MGP_LPJ_G0004713.1 mouse_genomes_project 9 124865667 124882650 + Lyzl4os antisense antisense MGP_LPJ_T0005588.1 MGP_LPJ_G0004713.1 mouse_genomes_project 9 124865690 124894818 + Lyzl4os antisense antisense MGP_LPJ_T0092948.1 MGP_LPJ_G0034929.1 mouse_genomes_project 9 75606786 75659200 + Myo5a protein_coding retained_intron MGP_LPJ_T0092949.1 MGP_LPJ_G0034929.1 mouse_genomes_project 9 75606965 75767690 + MGP_LPJ_P0092949 Myo5a protein_coding protein_coding MGP_LPJ_T0092950.1 MGP_LPJ_G0034929.1 mouse_genomes_project 9 75606983 75673737 + Myo5a protein_coding retained_intron MGP_LPJ_T0092951.1 MGP_LPJ_G0034929.1 mouse_genomes_project 9 75607163 75762542 + MGP_LPJ_P0092951 Myo5a protein_coding protein_coding MGP_LPJ_T0092952.1 MGP_LPJ_G0034929.1 mouse_genomes_project 9 75607342 75720670 + MGP_LPJ_P0092952 Myo5a protein_coding nonsense_mediated_decay MGP_LPJ_T0092953.1 MGP_LPJ_G0034929.1 mouse_genomes_project 9 75607377 75762945 + MGP_LPJ_P0092953 Myo5a protein_coding protein_coding MGP_LPJ_T0092954.1 MGP_LPJ_G0034929.1 mouse_genomes_project 9 75683967 75690602 + Myo5a protein_coding retained_intron MGP_LPJ_T0092955.1 MGP_LPJ_G0034929.1 mouse_genomes_project 9 75728297 75762476 + Myo5a protein_coding processed_transcript MGP_LPJ_T0092956.1 MGP_LPJ_G0034929.1 mouse_genomes_project 9 75728360 75738203 + Myo5a protein_coding retained_intron MGP_LPJ_T0092957.1 MGP_LPJ_G0034929.1 mouse_genomes_project 9 75730009 75740303 + MGP_LPJ_P0092957 Myo5a protein_coding protein_coding MGP_LPJ_T0092958.1 MGP_LPJ_G0034929.1 mouse_genomes_project 9 75730108 75761985 + MGP_LPJ_P0092958 Myo5a protein_coding protein_coding MGP_LPJ_T0092959.1 MGP_LPJ_G0034929.1 mouse_genomes_project 9 75730110 75745336 + MGP_LPJ_P0092959 Myo5a protein_coding protein_coding MGP_LPJ_T0092960.1 MGP_LPJ_G0034929.1 mouse_genomes_project 9 75734042 75737095 + Myo5a protein_coding retained_intron MGP_LPJ_T0092961.1 MGP_LPJ_G0034929.1 mouse_genomes_project 9 75737875 75747769 + Myo5a protein_coding retained_intron MGP_LPJ_T0098071.1 MGP_LPJ_G0036352.1 mouse_genomes_project 9 16266229 16266498 - pseudogene pseudogene MGP_LPJ_T0092415.1 MGP_LPJ_G0034805.1 mouse_genomes_project 9 59649903 60205524 - MGP_LPJ_P0092415 Thsd4 protein_coding protein_coding MGP_LPJ_T0092416.1 MGP_LPJ_G0034805.1 mouse_genomes_project 9 59649903 60219612 - MGP_LPJ_P0092416 Thsd4 protein_coding protein_coding MGP_LPJ_T0092417.1 MGP_LPJ_G0034805.1 mouse_genomes_project 9 59652701 59829588 - MGP_LPJ_P0092417 Thsd4 protein_coding protein_coding MGP_LPJ_T0092418.1 MGP_LPJ_G0034805.1 mouse_genomes_project 9 59675955 59684500 - Thsd4 protein_coding retained_intron MGP_LPJ_T0092419.1 MGP_LPJ_G0034805.1 mouse_genomes_project 9 60130057 60231538 - MGP_LPJ_P0092419 Thsd4 protein_coding protein_coding MGP_LPJ_T0092420.1 MGP_LPJ_G0034805.1 mouse_genomes_project 9 60218451 60219584 - Thsd4 protein_coding processed_transcript MGP_LPJ_T0092972.1 MGP_LPJ_G0034934.1 mouse_genomes_project 9 76002700 76004448 - MGP_LPJ_P0092972 A130057D12Rik protein_coding protein_coding MGP_LPJ_T0091052.1 MGP_LPJ_G0034312.1 mouse_genomes_project 9 17592023 17596134 + MGP_LPJ_P0091052 Olfr39 protein_coding protein_coding MGP_LPJ_T0091497.1 MGP_LPJ_G0034459.1 mouse_genomes_project 9 35412575 35438116 - MGP_LPJ_P0091497 Slc37a2 protein_coding protein_coding MGP_LPJ_T0091498.1 MGP_LPJ_G0034459.1 mouse_genomes_project 9 35413742 35437792 - MGP_LPJ_P0091498 Slc37a2 protein_coding protein_coding MGP_LPJ_T0091499.1 MGP_LPJ_G0034459.1 mouse_genomes_project 9 35413938 35418594 - Slc37a2 protein_coding retained_intron MGP_LPJ_T0009239.1 MGP_LPJ_G0007426.1 mouse_genomes_project 9 33988917 33991847 + lincRNA lincRNA MGP_LPJ_T0009240.1 MGP_LPJ_G0007426.1 mouse_genomes_project 9 33989475 33990029 + lincRNA lincRNA MGP_LPJ_T0091280.1 MGP_LPJ_G0034398.1 mouse_genomes_project 9 24401633 24450845 - MGP_LPJ_P0091280 Glb1l2 protein_coding protein_coding MGP_LPJ_T0091281.1 MGP_LPJ_G0034398.1 mouse_genomes_project 9 24401634 24450881 - MGP_LPJ_P0091281 Glb1l2 protein_coding protein_coding MGP_LPJ_T0091282.1 MGP_LPJ_G0034398.1 mouse_genomes_project 9 24402357 24450834 - MGP_LPJ_P0091282 Glb1l2 protein_coding protein_coding MGP_LPJ_T0091283.1 MGP_LPJ_G0034398.1 mouse_genomes_project 9 24403792 24446997 - MGP_LPJ_P0091283 Glb1l2 protein_coding protein_coding MGP_LPJ_T0091284.1 MGP_LPJ_G0034398.1 mouse_genomes_project 9 24406086 24407060 - Glb1l2 protein_coding retained_intron MGP_LPJ_T0091285.1 MGP_LPJ_G0034398.1 mouse_genomes_project 9 24412609 24436591 - Glb1l2 protein_coding retained_intron MGP_LPJ_T0091286.1 MGP_LPJ_G0034398.1 mouse_genomes_project 9 24420843 24450835 - MGP_LPJ_P0091286 Glb1l2 protein_coding nonsense_mediated_decay MGP_LPJ_T0093835.1 MGP_LPJ_G0035117.1 mouse_genomes_project 9 108461921 108467242 - MGP_LPJ_P0093835 Acy1 protein_coding protein_coding MGP_LPJ_T0093836.1 MGP_LPJ_G0035117.1 mouse_genomes_project 9 108461924 108467100 - Acy1 protein_coding retained_intron MGP_LPJ_T0093837.1 MGP_LPJ_G0035117.1 mouse_genomes_project 9 108461930 108463634 - Acy1 protein_coding retained_intron MGP_LPJ_T0093838.1 MGP_LPJ_G0035117.1 mouse_genomes_project 9 108463639 108465304 - Acy1 protein_coding retained_intron MGP_LPJ_T0093839.1 MGP_LPJ_G0035117.1 mouse_genomes_project 9 108463887 108467125 - MGP_LPJ_P0093839 Acy1 protein_coding nonsense_mediated_decay MGP_LPJ_T0093840.1 MGP_LPJ_G0035117.1 mouse_genomes_project 9 108464018 108467242 - MGP_LPJ_P0093840 Acy1 protein_coding protein_coding MGP_LPJ_T0093841.1 MGP_LPJ_G0035117.1 mouse_genomes_project 9 108465819 108467110 - MGP_LPJ_P0093841 Acy1 protein_coding protein_coding MGP_LPJ_T0092962.1 MGP_LPJ_G0034930.1 mouse_genomes_project 9 75779604 75860193 + MGP_LPJ_P0092962 Myo5c protein_coding unknown_likely_coding MGP_LPJ_T0090810.1 MGP_LPJ_G0034207.1 mouse_genomes_project 9 1045932 1068312 - MGP_LPJ_P0090810 Aasdhppt protein_coding protein_coding MGP_LPJ_T0091592.1 MGP_LPJ_G0034528.1 mouse_genomes_project 9 37707353 37812380 + MGP_LPJ_P0091592 protein_coding protein_coding MGP_LPJ_T0092381.1 MGP_LPJ_G0034798.1 mouse_genomes_project 9 59241204 59270528 + MGP_LPJ_P0092381 Celf6 protein_coding nonsense_mediated_decay MGP_LPJ_T0092382.1 MGP_LPJ_G0034798.1 mouse_genomes_project 9 59241479 59270528 + MGP_LPJ_P0092382 Celf6 protein_coding protein_coding MGP_LPJ_T0092383.1 MGP_LPJ_G0034798.1 mouse_genomes_project 9 59241479 59270528 + MGP_LPJ_P0092383 Celf6 protein_coding nonsense_mediated_decay MGP_LPJ_T0092384.1 MGP_LPJ_G0034798.1 mouse_genomes_project 9 59241665 59270533 + MGP_LPJ_P0092384 Celf6 protein_coding protein_coding MGP_LPJ_T0092385.1 MGP_LPJ_G0034798.1 mouse_genomes_project 9 59265927 59266681 + Celf6 protein_coding retained_intron MGP_LPJ_T0092386.1 MGP_LPJ_G0034798.1 mouse_genomes_project 9 59267302 59269371 + Celf6 protein_coding retained_intron MGP_LPJ_T0095053.1 MGP_LPJ_G0035354.1 mouse_genomes_project 9 126193853 126204533 - MGP_LPJ_P0095053 Zfp445 protein_coding protein_coding MGP_LPJ_T0009297.1 MGP_LPJ_G0007472.1 mouse_genomes_project 9 82251890 82257444 + Gm27226 lincRNA lincRNA MGP_LPJ_T0091270.1 MGP_LPJ_G0034395.1 mouse_genomes_project 9 22843064 22906481 + MGP_LPJ_P0091270 Sept7 protein_coding protein_coding MGP_LPJ_T0091271.1 MGP_LPJ_G0034395.1 mouse_genomes_project 9 22843064 22906481 + MGP_LPJ_P0091271 Sept7 protein_coding protein_coding MGP_LPJ_T0094225.1 MGP_LPJ_G0035176.1 mouse_genomes_project 9 110337622 110405391 - MGP_LPJ_P0094225 Dag1 protein_coding protein_coding MGP_LPJ_T0094226.1 MGP_LPJ_G0035176.1 mouse_genomes_project 9 110338932 110405248 - MGP_LPJ_P0094226 Dag1 protein_coding protein_coding MGP_LPJ_T0094227.1 MGP_LPJ_G0035176.1 mouse_genomes_project 9 110338943 110405351 - MGP_LPJ_P0094227 Dag1 protein_coding protein_coding MGP_LPJ_T0094228.1 MGP_LPJ_G0035176.1 mouse_genomes_project 9 110338946 110405169 - MGP_LPJ_P0094228 Dag1 protein_coding protein_coding MGP_LPJ_T0094229.1 MGP_LPJ_G0035176.1 mouse_genomes_project 9 110351165 110405184 - MGP_LPJ_P0094229 Dag1 protein_coding protein_coding MGP_LPJ_T0094230.1 MGP_LPJ_G0035176.1 mouse_genomes_project 9 110351203 110405142 - MGP_LPJ_P0094230 Dag1 protein_coding protein_coding MGP_LPJ_T0094231.1 MGP_LPJ_G0035176.1 mouse_genomes_project 9 110392123 110405184 - Dag1 protein_coding retained_intron MGP_LPJ_T0092279.1 MGP_LPJ_G0034770.1 mouse_genomes_project 9 57144365 57166533 - MGP_LPJ_P0092279 Csk protein_coding protein_coding MGP_LPJ_T0094399.1 MGP_LPJ_G0035201.1 mouse_genomes_project 9 110988059 110998528 + MGP_LPJ_P0094399 Nckipsd protein_coding protein_coding MGP_LPJ_T0094400.1 MGP_LPJ_G0035201.1 mouse_genomes_project 9 110988064 110990841 + MGP_LPJ_P0094400 Nckipsd protein_coding protein_coding MGP_LPJ_T0094401.1 MGP_LPJ_G0035201.1 mouse_genomes_project 9 110988112 110991297 + MGP_LPJ_P0094401 Nckipsd protein_coding protein_coding MGP_LPJ_T0094402.1 MGP_LPJ_G0035201.1 mouse_genomes_project 9 110991616 110993773 + MGP_LPJ_P0094402 Nckipsd protein_coding protein_coding MGP_LPJ_T0094403.1 MGP_LPJ_G0035201.1 mouse_genomes_project 9 110993119 110994018 + Nckipsd protein_coding retained_intron MGP_LPJ_T0094404.1 MGP_LPJ_G0035201.1 mouse_genomes_project 9 110994527 110995806 + Nckipsd protein_coding retained_intron MGP_LPJ_T0093470.1 MGP_LPJ_G0035041.1 mouse_genomes_project 9 98429023 98508009 - MGP_LPJ_P0093470 Spsb4 protein_coding protein_coding MGP_LPJ_T0093471.1 MGP_LPJ_G0035041.1 mouse_genomes_project 9 98429026 98470709 - Spsb4 protein_coding processed_transcript MGP_LPJ_T0093472.1 MGP_LPJ_G0035041.1 mouse_genomes_project 9 98429513 98457498 - Spsb4 protein_coding processed_transcript MGP_LPJ_T0093473.1 MGP_LPJ_G0035041.1 mouse_genomes_project 9 98480556 98507930 - Spsb4 protein_coding retained_intron MGP_LPJ_T0018512.1 MGP_LPJ_G0015669.1 mouse_genomes_project 9 89603014 89605974 - Snhg5 processed_transcript lincRNA MGP_LPJ_T0018513.1 MGP_LPJ_G0015669.1 mouse_genomes_project 9 89603016 89605935 - Snhg5 processed_transcript lincRNA MGP_LPJ_T0018514.1 MGP_LPJ_G0015669.1 mouse_genomes_project 9 89603021 89603930 - Snhg5 processed_transcript lincRNA MGP_LPJ_T0092737.1 MGP_LPJ_G0034888.1 mouse_genomes_project 9 70017351 70020577 - MGP_LPJ_P0092737 Foxb1 protein_coding protein_coding MGP_LPJ_T0094693.1 MGP_LPJ_G0035254.1 mouse_genomes_project 9 113425204 113432574 - MGP_LPJ_P0094693 protein_coding protein_coding MGP_LPJ_T0094694.1 MGP_LPJ_G0035254.1 mouse_genomes_project 9 113425859 113432510 - MGP_LPJ_P0094694 protein_coding nonsense_mediated_decay MGP_LPJ_T0094695.1 MGP_LPJ_G0035254.1 mouse_genomes_project 9 113428172 113432491 - MGP_LPJ_P0094695 protein_coding protein_coding MGP_LPJ_T0094696.1 MGP_LPJ_G0035254.1 mouse_genomes_project 9 113428468 113431289 - MGP_LPJ_P0094696 protein_coding protein_coding MGP_LPJ_T0101092.1 MGP_LPJ_G0039355.1 mouse_genomes_project 9 36753295 36753419 + Gm23271 snoRNA snoRNA MGP_LPJ_T0094067.1 MGP_LPJ_G0035155.1 mouse_genomes_project 9 109762264 109767292 - MGP_LPJ_P0094067 Gnat1 protein_coding protein_coding MGP_LPJ_T0094068.1 MGP_LPJ_G0035155.1 mouse_genomes_project 9 109762267 109767214 - Gnat1 protein_coding retained_intron MGP_LPJ_T0094069.1 MGP_LPJ_G0035155.1 mouse_genomes_project 9 109763087 109764232 - Gnat1 protein_coding retained_intron MGP_LPJ_T0094070.1 MGP_LPJ_G0035155.1 mouse_genomes_project 9 109764035 109766004 - Gnat1 protein_coding processed_transcript MGP_LPJ_T0094071.1 MGP_LPJ_G0035155.1 mouse_genomes_project 9 109764721 109767194 - Gnat1 protein_coding retained_intron MGP_LPJ_T0091105.1 MGP_LPJ_G0034326.1 mouse_genomes_project 9 18215407 18221061 + MGP_LPJ_P0091105 A230050P20Rik protein_coding protein_coding MGP_LPJ_T0091106.1 MGP_LPJ_G0034326.1 mouse_genomes_project 9 18215423 18221061 + A230050P20Rik protein_coding retained_intron MGP_LPJ_T0091107.1 MGP_LPJ_G0034326.1 mouse_genomes_project 9 18215445 18216861 + A230050P20Rik protein_coding processed_transcript MGP_LPJ_T0091108.1 MGP_LPJ_G0034326.1 mouse_genomes_project 9 18216042 18220537 + A230050P20Rik protein_coding retained_intron MGP_LPJ_T0091109.1 MGP_LPJ_G0034326.1 mouse_genomes_project 9 18217537 18219887 + A230050P20Rik protein_coding retained_intron MGP_LPJ_T0011083.1 MGP_LPJ_G0009201.1 mouse_genomes_project 9 50386337 50386421 - Mir34b miRNA miRNA MGP_LPJ_T0016038.1 MGP_LPJ_G0014129.1 mouse_genomes_project 9 78224105 78225306 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091296.1 MGP_LPJ_G0034402.1 mouse_genomes_project 9 24655406 24664617 + MGP_LPJ_P0091296 Thyn1 protein_coding protein_coding MGP_LPJ_T0092487.1 MGP_LPJ_G0034821.1 mouse_genomes_project 9 62716806 62729634 + MGP_LPJ_P0092487 Calml4 protein_coding protein_coding MGP_LPJ_T0092488.1 MGP_LPJ_G0034821.1 mouse_genomes_project 9 62716806 62729634 + MGP_LPJ_P0092488 Calml4 protein_coding protein_coding MGP_LPJ_T0098686.1 MGP_LPJ_G0036954.1 mouse_genomes_project 9 40152324 40152634 + Gm28119 sense_intronic sense_intronic MGP_LPJ_T0099848.1 MGP_LPJ_G0038111.1 mouse_genomes_project 9 83304544 83304641 - Gm24393 snRNA snRNA MGP_LPJ_T0093952.1 MGP_LPJ_G0035138.1 mouse_genomes_project 9 109392003 109404437 - MGP_LPJ_P0093952 Hemk1 protein_coding protein_coding MGP_LPJ_T0093953.1 MGP_LPJ_G0035138.1 mouse_genomes_project 9 109392611 109404405 - Hemk1 protein_coding retained_intron MGP_LPJ_T0093954.1 MGP_LPJ_G0035138.1 mouse_genomes_project 9 109392629 109402746 - Hemk1 protein_coding processed_transcript MGP_LPJ_T0093955.1 MGP_LPJ_G0035138.1 mouse_genomes_project 9 109392631 109394372 - Hemk1 protein_coding retained_intron MGP_LPJ_T0093956.1 MGP_LPJ_G0035138.1 mouse_genomes_project 9 109392910 109404420 - MGP_LPJ_P0093956 Hemk1 protein_coding protein_coding MGP_LPJ_T0093957.1 MGP_LPJ_G0035138.1 mouse_genomes_project 9 109394279 109396915 - Hemk1 protein_coding retained_intron MGP_LPJ_T0093958.1 MGP_LPJ_G0035138.1 mouse_genomes_project 9 109401228 109404389 - Hemk1 protein_coding retained_intron MGP_LPJ_T0092023.1 MGP_LPJ_G0034685.1 mouse_genomes_project 9 50023706 50026114 - MGP_LPJ_P0092023 1110032A03Rik protein_coding protein_coding MGP_LPJ_T0092024.1 MGP_LPJ_G0034685.1 mouse_genomes_project 9 50023734 50036743 - 1110032A03Rik protein_coding retained_intron MGP_LPJ_T0092025.1 MGP_LPJ_G0034685.1 mouse_genomes_project 9 50023737 50024573 - 1110032A03Rik protein_coding retained_intron MGP_LPJ_T0092026.1 MGP_LPJ_G0034685.1 mouse_genomes_project 9 50023848 50027903 - MGP_LPJ_P0092026 1110032A03Rik protein_coding protein_coding MGP_LPJ_T0092027.1 MGP_LPJ_G0034685.1 mouse_genomes_project 9 50023864 50028164 - MGP_LPJ_P0092027 1110032A03Rik protein_coding protein_coding MGP_LPJ_T0092028.1 MGP_LPJ_G0034685.1 mouse_genomes_project 9 50024708 50028102 - 1110032A03Rik protein_coding processed_transcript MGP_LPJ_T0092029.1 MGP_LPJ_G0034685.1 mouse_genomes_project 9 50024822 50028173 - 1110032A03Rik protein_coding processed_transcript MGP_LPJ_T0092033.1 MGP_LPJ_G0034685.1 mouse_genomes_project 9 50028597 50030960 - 1110032A03Rik protein_coding processed_transcript MGP_LPJ_T0091622.1 MGP_LPJ_G0034552.1 mouse_genomes_project 9 38460288 38461176 - MGP_LPJ_P0091622 protein_coding protein_coding MGP_LPJ_T0093797.1 MGP_LPJ_G0035108.1 mouse_genomes_project 9 107968366 107977178 - Col6a4 protein_coding processed_transcript MGP_LPJ_T0093798.1 MGP_LPJ_G0035108.1 mouse_genomes_project 9 107969377 108091047 - MGP_LPJ_P0093798 Col6a4 protein_coding protein_coding MGP_LPJ_T0093799.1 MGP_LPJ_G0035108.1 mouse_genomes_project 9 108058911 108060261 - Col6a4 protein_coding processed_transcript MGP_LPJ_T0091215.1 MGP_LPJ_G0034371.1 mouse_genomes_project 9 19431610 19442794 + MGP_LPJ_P0091215 Prkcsh protein_coding protein_coding MGP_LPJ_T0091216.1 MGP_LPJ_G0034371.1 mouse_genomes_project 9 19431610 19442794 + MGP_LPJ_P0091216 Prkcsh protein_coding protein_coding MGP_LPJ_T0098329.1 MGP_LPJ_G0036610.1 mouse_genomes_project 9 35203414 35203523 + n-R5s82 rRNA rRNA MGP_LPJ_T0016047.1 MGP_LPJ_G0014138.1 mouse_genomes_project 9 84352003 84352391 + processed_pseudogene processed_pseudogene MGP_LPJ_T0093289.1 MGP_LPJ_G0035008.1 mouse_genomes_project 9 90727778 90765486 - MGP_LPJ_P0093289 AF529169 protein_coding protein_coding MGP_LPJ_T0093290.1 MGP_LPJ_G0035008.1 mouse_genomes_project 9 90731624 90745769 - MGP_LPJ_P0093290 AF529169 protein_coding nonsense_mediated_decay MGP_LPJ_T0092115.1 MGP_LPJ_G0034713.1 mouse_genomes_project 9 53233954 53234434 + MGP_LPJ_P0092115 Gm16380 protein_coding protein_coding MGP_LPJ_T0005546.1 MGP_LPJ_G0004682.1 mouse_genomes_project 9 108150120 108161893 + D030055H07Rik antisense antisense MGP_LPJ_T0005547.1 MGP_LPJ_G0004682.1 mouse_genomes_project 9 108157133 108161939 + D030055H07Rik antisense antisense MGP_LPJ_T0005548.1 MGP_LPJ_G0004682.1 mouse_genomes_project 9 108158521 108162389 + D030055H07Rik antisense antisense MGP_LPJ_T0009325.1 MGP_LPJ_G0007491.1 mouse_genomes_project 9 98539598 98564123 - Gm19325 lincRNA lincRNA MGP_LPJ_T0091580.1 MGP_LPJ_G0034516.1 mouse_genomes_project 9 37267794 37268727 - MGP_LPJ_P0091580 Olfr934 protein_coding protein_coding MGP_LPJ_T0094714.1 MGP_LPJ_G0035258.1 mouse_genomes_project 9 113543374 113546157 - MGP_LPJ_P0094714 Ccrl2 protein_coding protein_coding MGP_LPJ_T0094715.1 MGP_LPJ_G0035258.1 mouse_genomes_project 9 113543720 113546406 - MGP_LPJ_P0094715 Ccrl2 protein_coding protein_coding MGP_LPJ_T0094716.1 MGP_LPJ_G0035258.1 mouse_genomes_project 9 113544916 113546133 - MGP_LPJ_P0094716 Ccrl2 protein_coding protein_coding MGP_LPJ_T0094053.1 MGP_LPJ_G0035154.1 mouse_genomes_project 9 109736338 109746003 - MGP_LPJ_P0094053 Slc38a3 protein_coding protein_coding MGP_LPJ_T0094054.1 MGP_LPJ_G0035154.1 mouse_genomes_project 9 109736868 109754170 - MGP_LPJ_P0094054 Slc38a3 protein_coding protein_coding MGP_LPJ_T0094055.1 MGP_LPJ_G0035154.1 mouse_genomes_project 9 109736870 109755796 - Slc38a3 protein_coding retained_intron MGP_LPJ_T0094056.1 MGP_LPJ_G0035154.1 mouse_genomes_project 9 109736874 109754222 - MGP_LPJ_P0094056 Slc38a3 protein_coding protein_coding MGP_LPJ_T0094057.1 MGP_LPJ_G0035154.1 mouse_genomes_project 9 109736874 109755761 - MGP_LPJ_P0094057 Slc38a3 protein_coding protein_coding MGP_LPJ_T0094058.1 MGP_LPJ_G0035154.1 mouse_genomes_project 9 109741501 109743116 - MGP_LPJ_P0094058 Slc38a3 protein_coding nonsense_mediated_decay MGP_LPJ_T0094059.1 MGP_LPJ_G0035154.1 mouse_genomes_project 9 109741531 109742703 - MGP_LPJ_P0094059 Slc38a3 protein_coding nonsense_mediated_decay MGP_LPJ_T0094060.1 MGP_LPJ_G0035154.1 mouse_genomes_project 9 109741551 109742494 - Slc38a3 protein_coding retained_intron MGP_LPJ_T0094061.1 MGP_LPJ_G0035154.1 mouse_genomes_project 9 109742875 109743735 - Slc38a3 protein_coding retained_intron MGP_LPJ_T0094062.1 MGP_LPJ_G0035154.1 mouse_genomes_project 9 109743370 109745693 - Slc38a3 protein_coding processed_transcript MGP_LPJ_T0094063.1 MGP_LPJ_G0035154.1 mouse_genomes_project 9 109744103 109756314 - MGP_LPJ_P0094063 Slc38a3 protein_coding protein_coding MGP_LPJ_T0094064.1 MGP_LPJ_G0035154.1 mouse_genomes_project 9 109744284 109755793 - MGP_LPJ_P0094064 Slc38a3 protein_coding protein_coding MGP_LPJ_T0094065.1 MGP_LPJ_G0035154.1 mouse_genomes_project 9 109745109 109752216 - MGP_LPJ_P0094065 Slc38a3 protein_coding protein_coding MGP_LPJ_T0094066.1 MGP_LPJ_G0035154.1 mouse_genomes_project 9 109745692 109755806 - Slc38a3 protein_coding processed_transcript MGP_LPJ_T0091916.1 MGP_LPJ_G0034646.1 mouse_genomes_project 9 45217115 45222180 + MGP_LPJ_P0091916 Apoa5 protein_coding protein_coding MGP_LPJ_T0091917.1 MGP_LPJ_G0034646.1 mouse_genomes_project 9 45217560 45222180 + MGP_LPJ_P0091917 Apoa5 protein_coding protein_coding MGP_LPJ_T0011122.1 MGP_LPJ_G0009240.1 mouse_genomes_project 9 113094599 113094716 - Mir8107 miRNA miRNA MGP_LPJ_T0091039.1 MGP_LPJ_G0034299.1 mouse_genomes_project 9 16939131 16960166 + MGP_LPJ_P0091039 Zfp317 protein_coding unknown_likely_coding MGP_LPJ_T0009341.1 MGP_LPJ_G0007506.1 mouse_genomes_project 9 108125414 108126586 - Gm29208 lincRNA lincRNA MGP_LPJ_T0093299.1 MGP_LPJ_G0035012.1 mouse_genomes_project 9 91210419 91221436 + MGP_LPJ_P0093299 Ctsh protein_coding protein_coding MGP_LPJ_T0093300.1 MGP_LPJ_G0035012.1 mouse_genomes_project 9 91210534 91233720 + MGP_LPJ_P0093300 Ctsh protein_coding protein_coding MGP_LPJ_T0093301.1 MGP_LPJ_G0035012.1 mouse_genomes_project 9 91210773 91233718 + Ctsh protein_coding retained_intron MGP_LPJ_T0093302.1 MGP_LPJ_G0035012.1 mouse_genomes_project 9 91210788 91211610 + Ctsh protein_coding retained_intron MGP_LPJ_T0093303.1 MGP_LPJ_G0035012.1 mouse_genomes_project 9 91210804 91220253 + MGP_LPJ_P0093303 Ctsh protein_coding protein_coding MGP_LPJ_T0093304.1 MGP_LPJ_G0035012.1 mouse_genomes_project 9 91210805 91233718 + MGP_LPJ_P0093304 Ctsh protein_coding nonsense_mediated_decay MGP_LPJ_T0093305.1 MGP_LPJ_G0035012.1 mouse_genomes_project 9 91210821 91223356 + Ctsh protein_coding retained_intron MGP_LPJ_T0093306.1 MGP_LPJ_G0035012.1 mouse_genomes_project 9 91210826 91233372 + MGP_LPJ_P0093306 Ctsh protein_coding protein_coding MGP_LPJ_T0093307.1 MGP_LPJ_G0035012.1 mouse_genomes_project 9 91216142 91217612 + Ctsh protein_coding retained_intron MGP_LPJ_T0093308.1 MGP_LPJ_G0035012.1 mouse_genomes_project 9 91218538 91227897 + Ctsh protein_coding retained_intron MGP_LPJ_T0093309.1 MGP_LPJ_G0035012.1 mouse_genomes_project 9 91227707 91233380 + Ctsh protein_coding retained_intron MGP_LPJ_T0011094.1 MGP_LPJ_G0009212.1 mouse_genomes_project 9 67397719 67397786 - Mir190a miRNA miRNA MGP_LPJ_T0002496.1 MGP_LPJ_G0002402.1 mouse_genomes_project 9 113541676 113542089 - TEC TEC MGP_LPJ_T0092762.1 MGP_LPJ_G0034892.1 mouse_genomes_project 9 70372923 70427007 - MGP_LPJ_P0092762 Fam81a protein_coding protein_coding MGP_LPJ_T0092763.1 MGP_LPJ_G0034892.1 mouse_genomes_project 9 70386038 70386565 - Fam81a protein_coding retained_intron MGP_LPJ_T0092764.1 MGP_LPJ_G0034892.1 mouse_genomes_project 9 70410392 70427232 - MGP_LPJ_P0092764 Fam81a protein_coding protein_coding MGP_LPJ_T0092765.1 MGP_LPJ_G0034892.1 mouse_genomes_project 9 70410423 70429064 - MGP_LPJ_P0092765 Fam81a protein_coding protein_coding MGP_LPJ_T0093921.1 MGP_LPJ_G0035134.1 mouse_genomes_project 9 108935303 108943085 - MGP_LPJ_P0093921 Rbm15b protein_coding protein_coding MGP_LPJ_T0093922.1 MGP_LPJ_G0035134.1 mouse_genomes_project 9 108939132 108940001 - MGP_LPJ_P0093922 Rbm15b protein_coding protein_coding MGP_LPJ_T0093115.1 MGP_LPJ_G0034973.1 mouse_genomes_project 9 81137650 81274874 - MGP_LPJ_P0093115 Impg1 protein_coding protein_coding MGP_LPJ_T0093116.1 MGP_LPJ_G0034973.1 mouse_genomes_project 9 81138287 81274917 - MGP_LPJ_P0093116 Impg1 protein_coding protein_coding MGP_LPJ_T0093117.1 MGP_LPJ_G0034973.1 mouse_genomes_project 9 81215720 81274874 - MGP_LPJ_P0093117 Impg1 protein_coding protein_coding MGP_LPJ_T0101096.1 MGP_LPJ_G0039359.1 mouse_genomes_project 9 39323816 39323906 + Snord14e snoRNA snoRNA MGP_LPJ_T0091578.1 MGP_LPJ_G0034514.1 mouse_genomes_project 9 37213373 37214910 + MGP_LPJ_P0091578 protein_coding protein_coding MGP_LPJ_T0091800.1 MGP_LPJ_G0034612.1 mouse_genomes_project 9 43565682 43595463 - MGP_LPJ_P0091800 Arcn1 protein_coding protein_coding MGP_LPJ_T0091801.1 MGP_LPJ_G0034612.1 mouse_genomes_project 9 43579044 43595416 - Arcn1 protein_coding retained_intron MGP_LPJ_T0091802.1 MGP_LPJ_G0034612.1 mouse_genomes_project 9 43579951 43587666 - Arcn1 protein_coding processed_transcript MGP_LPJ_T0091154.1 MGP_LPJ_G0034349.1 mouse_genomes_project 9 18740745 18773659 + MGP_LPJ_P0091154 Ilf3 protein_coding unknown_likely_coding MGP_LPJ_T0091155.1 MGP_LPJ_G0034349.1 mouse_genomes_project 9 18740831 18774961 + MGP_LPJ_P0091155 Ilf3 protein_coding protein_coding MGP_LPJ_T0091156.1 MGP_LPJ_G0034349.1 mouse_genomes_project 9 18740831 18778522 + MGP_LPJ_P0091156 Ilf3 protein_coding protein_coding MGP_LPJ_T0091157.1 MGP_LPJ_G0034349.1 mouse_genomes_project 9 18776035 18778531 + MGP_LPJ_P0091157 Ilf3 protein_coding unknown_likely_coding MGP_LPJ_T0092387.1 MGP_LPJ_G0034799.1 mouse_genomes_project 9 59280617 59314632 + MGP_LPJ_P0092387 Parp6 protein_coding protein_coding MGP_LPJ_T0002488.1 MGP_LPJ_G0002394.1 mouse_genomes_project 9 111005041 111005383 + TEC TEC MGP_LPJ_T0016037.1 MGP_LPJ_G0014128.1 mouse_genomes_project 9 77955960 77956362 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011085.1 MGP_LPJ_G0009203.1 mouse_genomes_project 9 51419903 51420020 + Mir6244 miRNA miRNA MGP_LPJ_T0099815.1 MGP_LPJ_G0038078.1 mouse_genomes_project 9 36016937 36017136 - Gm24764 snRNA snRNA MGP_LPJ_T0005468.1 MGP_LPJ_G0004631.1 mouse_genomes_project 9 51130836 51170104 - Arhgap20os antisense antisense MGP_LPJ_T0005469.1 MGP_LPJ_G0004631.1 mouse_genomes_project 9 51137529 51169991 - Arhgap20os antisense antisense MGP_LPJ_T0005470.1 MGP_LPJ_G0004631.1 mouse_genomes_project 9 51137537 51170103 - Arhgap20os antisense antisense MGP_LPJ_T0005471.1 MGP_LPJ_G0004631.1 mouse_genomes_project 9 51138394 51169976 - Arhgap20os antisense antisense MGP_LPJ_T0005542.1 MGP_LPJ_G0004678.1 mouse_genomes_project 9 105393056 105401849 + 4932413F04Rik antisense antisense MGP_LPJ_T0005564.1 MGP_LPJ_G0004693.1 mouse_genomes_project 9 109657403 109670001 - Gm16343 antisense antisense MGP_LPJ_T0002375.1 MGP_LPJ_G0002282.1 mouse_genomes_project 9 30477209 30479838 - TEC TEC MGP_LPJ_T0009278.1 MGP_LPJ_G0007455.1 mouse_genomes_project 9 70018381 70098790 + B230323A14Rik lincRNA lincRNA MGP_LPJ_T0009279.1 MGP_LPJ_G0007455.1 mouse_genomes_project 9 70020782 70098144 + B230323A14Rik lincRNA lincRNA MGP_LPJ_T0009227.1 MGP_LPJ_G0007414.1 mouse_genomes_project 9 19515851 19532736 + Gm16845 lincRNA lincRNA MGP_LPJ_T0091845.1 MGP_LPJ_G0034626.1 mouse_genomes_project 9 43959791 43972500 + MGP_LPJ_P0091845 Scn2b protein_coding protein_coding MGP_LPJ_T0091846.1 MGP_LPJ_G0034626.1 mouse_genomes_project 9 43959796 43972498 + MGP_LPJ_P0091846 Scn2b protein_coding protein_coding MGP_LPJ_T0098338.1 MGP_LPJ_G0036619.1 mouse_genomes_project 9 103882904 103883022 + n-R5s88 rRNA rRNA MGP_LPJ_T0094670.1 MGP_LPJ_G0035246.1 mouse_genomes_project 9 113289444 113293441 + MGP_LPJ_P0094670 Prss44 protein_coding protein_coding MGP_LPJ_T0094671.1 MGP_LPJ_G0035246.1 mouse_genomes_project 9 113289477 113300090 + MGP_LPJ_P0094671 Prss44 protein_coding nonsense_mediated_decay MGP_LPJ_T0094672.1 MGP_LPJ_G0035246.1 mouse_genomes_project 9 113289891 113291970 + MGP_LPJ_P0094672 Prss44 protein_coding protein_coding MGP_LPJ_T0094673.1 MGP_LPJ_G0035246.1 mouse_genomes_project 9 113290657 113292390 + Prss44 protein_coding retained_intron MGP_LPJ_T0094812.1 MGP_LPJ_G0035277.1 mouse_genomes_project 9 117269754 117276999 - MGP_LPJ_P0094812 Ccr4 protein_coding protein_coding MGP_LPJ_T0093897.1 MGP_LPJ_G0035128.1 mouse_genomes_project 9 108657446 108658540 + MGP_LPJ_P0093897 Iqcf6 protein_coding protein_coding MGP_LPJ_T0009309.1 MGP_LPJ_G0007480.1 mouse_genomes_project 9 91255880 91257588 + Gm26882 lincRNA lincRNA MGP_LPJ_T0092132.1 MGP_LPJ_G0034720.1 mouse_genomes_project 9 53906051 53922694 - MGP_LPJ_P0092132 Cib2 protein_coding protein_coding MGP_LPJ_T0016017.1 MGP_LPJ_G0014108.1 mouse_genomes_project 9 72563442 72564058 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002419.1 MGP_LPJ_G0002326.1 mouse_genomes_project 9 84318528 84321149 + TEC TEC MGP_LPJ_T0095088.1 MGP_LPJ_G0035370.1 mouse_genomes_project 9 126986732 127140473 - MGP_LPJ_P0095088 Slc6a20a protein_coding unknown_likely_coding MGP_LPJ_T0095089.1 MGP_LPJ_G0035370.1 mouse_genomes_project 9 126986736 127140552 - MGP_LPJ_P0095089 Slc6a20a protein_coding protein_coding MGP_LPJ_T0095090.1 MGP_LPJ_G0035370.1 mouse_genomes_project 9 126987610 127140473 - MGP_LPJ_P0095090 Slc6a20a protein_coding protein_coding MGP_LPJ_T0095091.1 MGP_LPJ_G0035370.1 mouse_genomes_project 9 127050504 127140449 - MGP_LPJ_P0095091 Slc6a20a protein_coding protein_coding MGP_LPJ_T0091960.1 MGP_LPJ_G0034662.1 mouse_genomes_project 9 48164523 48224487 + MGP_LPJ_P0091960 Usp28 protein_coding protein_coding MGP_LPJ_T0091961.1 MGP_LPJ_G0034662.1 mouse_genomes_project 9 48164619 48223519 + MGP_LPJ_P0091961 Usp28 protein_coding unknown_likely_coding MGP_LPJ_T0002381.1 MGP_LPJ_G0002288.1 mouse_genomes_project 9 32582407 32602197 + TEC TEC MGP_LPJ_T0093221.1 MGP_LPJ_G0034992.1 mouse_genomes_project 9 87806667 87823710 + MGP_LPJ_P0093221 Prss35 protein_coding protein_coding MGP_LPJ_T0093222.1 MGP_LPJ_G0034992.1 mouse_genomes_project 9 87806667 87823881 + MGP_LPJ_P0093222 Prss35 protein_coding protein_coding MGP_LPJ_T0091550.1 MGP_LPJ_G0034492.1 mouse_genomes_project 9 36606204 36607200 + MGP_LPJ_P0091550 Olfr250 protein_coding protein_coding MGP_LPJ_T0002480.1 MGP_LPJ_G0002386.1 mouse_genomes_project 9 109716667 109718411 - TEC TEC MGP_LPJ_T0092678.1 MGP_LPJ_G0034876.1 mouse_genomes_project 9 66942485 66944518 + MGP_LPJ_P0092678 Gm10647 protein_coding protein_coding MGP_LPJ_T0093850.1 MGP_LPJ_G0035119.1 mouse_genomes_project 9 108477634 108481423 + MGP_LPJ_P0093850 Abhd14b protein_coding protein_coding MGP_LPJ_T0093851.1 MGP_LPJ_G0035119.1 mouse_genomes_project 9 108477638 108481448 + MGP_LPJ_P0093851 Abhd14b protein_coding protein_coding MGP_LPJ_T0093852.1 MGP_LPJ_G0035119.1 mouse_genomes_project 9 108478051 108481944 + MGP_LPJ_P0093852 Abhd14b protein_coding protein_coding MGP_LPJ_T0093853.1 MGP_LPJ_G0035119.1 mouse_genomes_project 9 108478464 108482754 + MGP_LPJ_P0093853 Abhd14b protein_coding protein_coding MGP_LPJ_T0093854.1 MGP_LPJ_G0035119.1 mouse_genomes_project 9 108478499 108481912 + MGP_LPJ_P0093854 Abhd14b protein_coding protein_coding MGP_LPJ_T0093855.1 MGP_LPJ_G0035119.1 mouse_genomes_project 9 108478538 108481884 + MGP_LPJ_P0093855 Abhd14b protein_coding protein_coding MGP_LPJ_T0093373.1 MGP_LPJ_G0035026.1 mouse_genomes_project 9 96763882 96771114 - MGP_LPJ_P0093373 Chst2 protein_coding protein_coding MGP_LPJ_T0094811.1 MGP_LPJ_G0035276.1 mouse_genomes_project 9 117174862 117184849 + MGP_LPJ_P0094811 Tmppe protein_coding protein_coding MGP_LPJ_T0092285.1 MGP_LPJ_G0034774.1 mouse_genomes_project 9 57279356 57295849 - MGP_LPJ_P0092285 Clk3 protein_coding protein_coding MGP_LPJ_T0092406.1 MGP_LPJ_G0034804.1 mouse_genomes_project 9 59623595 59642749 - Nr2e3 protein_coding retained_intron MGP_LPJ_T0092407.1 MGP_LPJ_G0034804.1 mouse_genomes_project 9 59623595 59630867 - Nr2e3 protein_coding retained_intron MGP_LPJ_T0092408.1 MGP_LPJ_G0034804.1 mouse_genomes_project 9 59623595 59630950 - MGP_LPJ_P0092408 Nr2e3 protein_coding protein_coding MGP_LPJ_T0092409.1 MGP_LPJ_G0034804.1 mouse_genomes_project 9 59623811 59630943 - Nr2e3 protein_coding retained_intron MGP_LPJ_T0092410.1 MGP_LPJ_G0034804.1 mouse_genomes_project 9 59623952 59630907 - Nr2e3 protein_coding retained_intron MGP_LPJ_T0092411.1 MGP_LPJ_G0034804.1 mouse_genomes_project 9 59627582 59629624 - Nr2e3 protein_coding retained_intron MGP_LPJ_T0092412.1 MGP_LPJ_G0034804.1 mouse_genomes_project 9 59628203 59630227 - Nr2e3 protein_coding processed_transcript MGP_LPJ_T0092413.1 MGP_LPJ_G0034804.1 mouse_genomes_project 9 59629430 59642745 - Nr2e3 protein_coding processed_transcript MGP_LPJ_T0092414.1 MGP_LPJ_G0034804.1 mouse_genomes_project 9 59629550 59630907 - Nr2e3 protein_coding retained_intron MGP_LPJ_T0002479.1 MGP_LPJ_G0002385.1 mouse_genomes_project 9 108089751 108092717 + TEC TEC MGP_LPJ_T0099834.1 MGP_LPJ_G0038097.1 mouse_genomes_project 9 66444308 66444410 - Gm23428 snRNA snRNA MGP_LPJ_T0093122.1 MGP_LPJ_G0034976.1 mouse_genomes_project 9 83677198 83698602 + MGP_LPJ_P0093122 Irak1bp1 protein_coding protein_coding MGP_LPJ_T0093123.1 MGP_LPJ_G0034976.1 mouse_genomes_project 9 83677464 83697935 + MGP_LPJ_P0093123 Irak1bp1 protein_coding protein_coding MGP_LPJ_T0093510.1 MGP_LPJ_G0035054.1 mouse_genomes_project 9 100598531 100628849 - MGP_LPJ_P0093510 Gm1123 protein_coding protein_coding MGP_LPJ_T0094264.1 MGP_LPJ_G0035185.1 mouse_genomes_project 9 110589644 110600019 + MGP_LPJ_P0094264 BC048562 protein_coding protein_coding MGP_LPJ_T0094265.1 MGP_LPJ_G0035185.1 mouse_genomes_project 9 110589656 110599819 + BC048562 protein_coding processed_transcript MGP_LPJ_T0090955.1 MGP_LPJ_G0034256.1 mouse_genomes_project 9 11917077 11927657 + MGP_LPJ_P0090955 Gpr83 protein_coding protein_coding MGP_LPJ_T0090956.1 MGP_LPJ_G0034256.1 mouse_genomes_project 9 11917121 11927178 + MGP_LPJ_P0090956 Gpr83 protein_coding protein_coding MGP_LPJ_T0090957.1 MGP_LPJ_G0034256.1 mouse_genomes_project 9 11922207 11927657 + Gpr83 protein_coding retained_intron MGP_LPJ_T0091951.1 MGP_LPJ_G0034658.1 mouse_genomes_project 9 47736756 47742256 - Nnmt protein_coding processed_transcript MGP_LPJ_T0091952.1 MGP_LPJ_G0034658.1 mouse_genomes_project 9 47736756 47749947 - MGP_LPJ_P0091952 Nnmt protein_coding protein_coding MGP_LPJ_T0091953.1 MGP_LPJ_G0034658.1 mouse_genomes_project 9 47736756 47749947 - MGP_LPJ_P0091953 Nnmt protein_coding protein_coding MGP_LPJ_T0091954.1 MGP_LPJ_G0034658.1 mouse_genomes_project 9 47736770 47742330 - Nnmt protein_coding processed_transcript MGP_LPJ_T0091955.1 MGP_LPJ_G0034658.1 mouse_genomes_project 9 47748048 47749871 - Nnmt protein_coding retained_intron MGP_LPJ_T0011747.1 MGP_LPJ_G0009865.1 mouse_genomes_project 9 18150672 18150993 + Gm26274 misc_RNA misc_RNA MGP_LPJ_T0092347.1 MGP_LPJ_G0034788.1 mouse_genomes_project 9 58104424 58121280 - MGP_LPJ_P0092347 Cd276 protein_coding protein_coding MGP_LPJ_T0092348.1 MGP_LPJ_G0034788.1 mouse_genomes_project 9 58104426 58137870 - MGP_LPJ_P0092348 Cd276 protein_coding protein_coding MGP_LPJ_T0091193.1 MGP_LPJ_G0034359.1 mouse_genomes_project 9 19145067 19149759 - MGP_LPJ_P0091193 Spc24 protein_coding protein_coding MGP_LPJ_T0002494.1 MGP_LPJ_G0002400.1 mouse_genomes_project 9 112998410 113000497 + TEC TEC MGP_LPJ_T0098689.1 MGP_LPJ_G0036957.1 mouse_genomes_project 9 102199341 102199834 - Gm28586 sense_intronic sense_intronic MGP_LPJ_T0099866.1 MGP_LPJ_G0038129.1 mouse_genomes_project 9 110915994 110916101 - Gm24259 snRNA snRNA MGP_LPJ_T0091655.1 MGP_LPJ_G0034565.1 mouse_genomes_project 9 39320048 39321267 + protein_coding retained_intron MGP_LPJ_T0093086.1 MGP_LPJ_G0034970.1 mouse_genomes_project 9 80616423 80777593 - MGP_LPJ_P0093086 Filip1 protein_coding protein_coding MGP_LPJ_T0093087.1 MGP_LPJ_G0034970.1 mouse_genomes_project 9 80616429 80632250 - Filip1 protein_coding processed_transcript MGP_LPJ_T0093088.1 MGP_LPJ_G0034970.1 mouse_genomes_project 9 80622020 80761933 - MGP_LPJ_P0093088 Filip1 protein_coding protein_coding MGP_LPJ_T0091035.1 MGP_LPJ_G0034295.1 mouse_genomes_project 9 16816309 16817248 + MGP_LPJ_P0091035 Olfr851 protein_coding protein_coding MGP_LPJ_T0091041.1 MGP_LPJ_G0034301.1 mouse_genomes_project 9 17037624 17038265 + MGP_LPJ_P0091041 Olfr857 protein_coding protein_coding MGP_LPJ_T0099821.1 MGP_LPJ_G0038084.1 mouse_genomes_project 9 44799652 44799751 - Gm24646 snRNA snRNA MGP_LPJ_T0091543.1 MGP_LPJ_G0034485.1 mouse_genomes_project 9 36360548 36361609 + MGP_LPJ_P0091543 Olfr890 protein_coding protein_coding MGP_LPJ_T0092349.1 MGP_LPJ_G0034789.1 mouse_genomes_project 9 58165311 58237638 + MGP_LPJ_P0092349 Nptn protein_coding protein_coding MGP_LPJ_T0092350.1 MGP_LPJ_G0034789.1 mouse_genomes_project 9 58165363 58239198 + MGP_LPJ_P0092350 Nptn protein_coding protein_coding MGP_LPJ_T0092351.1 MGP_LPJ_G0034789.1 mouse_genomes_project 9 58165445 58226998 + MGP_LPJ_P0092351 Nptn protein_coding non_stop_decay MGP_LPJ_T0092352.1 MGP_LPJ_G0034789.1 mouse_genomes_project 9 58165477 58239198 + MGP_LPJ_P0092352 Nptn protein_coding protein_coding MGP_LPJ_T0092353.1 MGP_LPJ_G0034789.1 mouse_genomes_project 9 58165478 58230121 + MGP_LPJ_P0092353 Nptn protein_coding nonsense_mediated_decay MGP_LPJ_T0092354.1 MGP_LPJ_G0034789.1 mouse_genomes_project 9 58165478 58237638 + MGP_LPJ_P0092354 Nptn protein_coding protein_coding MGP_LPJ_T0092355.1 MGP_LPJ_G0034789.1 mouse_genomes_project 9 58165507 58237638 + MGP_LPJ_P0092355 Nptn protein_coding protein_coding MGP_LPJ_T0092356.1 MGP_LPJ_G0034789.1 mouse_genomes_project 9 58165512 58238282 + MGP_LPJ_P0092356 Nptn protein_coding nonsense_mediated_decay MGP_LPJ_T0092357.1 MGP_LPJ_G0034789.1 mouse_genomes_project 9 58165515 58229983 + Nptn protein_coding processed_transcript MGP_LPJ_T0092358.1 MGP_LPJ_G0034789.1 mouse_genomes_project 9 58215408 58244301 + MGP_LPJ_P0092358 Nptn protein_coding nonsense_mediated_decay MGP_LPJ_T0092359.1 MGP_LPJ_G0034789.1 mouse_genomes_project 9 58215409 58241525 + MGP_LPJ_P0092359 Nptn protein_coding protein_coding MGP_LPJ_T0092360.1 MGP_LPJ_G0034789.1 mouse_genomes_project 9 58236518 58238377 + Nptn protein_coding retained_intron MGP_LPJ_T0092361.1 MGP_LPJ_G0034789.1 mouse_genomes_project 9 58238295 58239138 + Nptn protein_coding processed_transcript MGP_LPJ_T0092379.1 MGP_LPJ_G0034796.1 mouse_genomes_project 9 59175593 59184605 - MGP_LPJ_P0092379 Tmem202 protein_coding protein_coding MGP_LPJ_T0094906.1 MGP_LPJ_G0035306.1 mouse_genomes_project 9 122445961 122451554 - MGP_LPJ_P0094906 Myd88 protein_coding protein_coding MGP_LPJ_T0094907.1 MGP_LPJ_G0035306.1 mouse_genomes_project 9 122445973 122451515 - Myd88 protein_coding retained_intron MGP_LPJ_T0094909.1 MGP_LPJ_G0035306.1 mouse_genomes_project 9 122451202 122452924 - MGP_LPJ_P0094909 Myd88 protein_coding protein_coding MGP_LPJ_T0092653.1 MGP_LPJ_G0034871.1 mouse_genomes_project 9 66434130 66457642 + Herc1 protein_coding retained_intron MGP_LPJ_T0092654.1 MGP_LPJ_G0034871.1 mouse_genomes_project 9 66434206 66601722 + MGP_LPJ_P0092654 Herc1 protein_coding protein_coding MGP_LPJ_T0092655.1 MGP_LPJ_G0034871.1 mouse_genomes_project 9 66532263 66543234 + Herc1 protein_coding retained_intron MGP_LPJ_T0092656.1 MGP_LPJ_G0034871.1 mouse_genomes_project 9 66542060 66555642 + MGP_LPJ_P0092656 Herc1 protein_coding protein_coding MGP_LPJ_T0092657.1 MGP_LPJ_G0034871.1 mouse_genomes_project 9 66559576 66568279 + Herc1 protein_coding retained_intron MGP_LPJ_T0092658.1 MGP_LPJ_G0034871.1 mouse_genomes_project 9 66588926 66593125 + Herc1 protein_coding retained_intron MGP_LPJ_T0092659.1 MGP_LPJ_G0034871.1 mouse_genomes_project 9 66592858 66600540 + Herc1 protein_coding retained_intron MGP_LPJ_T0091336.1 MGP_LPJ_G0034416.1 mouse_genomes_project 9 29170017 29225612 + MGP_LPJ_P0091336 Prdm10 protein_coding protein_coding MGP_LPJ_T0091337.1 MGP_LPJ_G0034416.1 mouse_genomes_project 9 29208794 29280654 + MGP_LPJ_P0091337 Prdm10 protein_coding unknown_likely_coding MGP_LPJ_T0091338.1 MGP_LPJ_G0034416.1 mouse_genomes_project 9 29209837 29225601 + Prdm10 protein_coding retained_intron MGP_LPJ_T0091339.1 MGP_LPJ_G0034416.1 mouse_genomes_project 9 29210139 29277461 + MGP_LPJ_P0091339 Prdm10 protein_coding protein_coding MGP_LPJ_T0091767.1 MGP_LPJ_G0034601.1 mouse_genomes_project 9 43184858 43190845 + MGP_LPJ_P0091767 Slc37a4 protein_coding unknown_likely_coding MGP_LPJ_T0091768.1 MGP_LPJ_G0034601.1 mouse_genomes_project 9 43186058 43190838 + MGP_LPJ_P0091768 Slc37a4 protein_coding protein_coding MGP_LPJ_T0090890.1 MGP_LPJ_G0034237.1 mouse_genomes_project 9 5884170 6146678 - MGP_LPJ_P0090890 Arhgap42 protein_coding protein_coding MGP_LPJ_T0090891.1 MGP_LPJ_G0034237.1 mouse_genomes_project 9 5887420 6146356 - MGP_LPJ_P0090891 Arhgap42 protein_coding unknown_likely_coding MGP_LPJ_T0090892.1 MGP_LPJ_G0034237.1 mouse_genomes_project 9 5901031 6146678 - Arhgap42 protein_coding retained_intron MGP_LPJ_T0090893.1 MGP_LPJ_G0034237.1 mouse_genomes_project 9 6047406 6146603 - MGP_LPJ_P0090893 Arhgap42 protein_coding protein_coding MGP_LPJ_T0091442.1 MGP_LPJ_G0034446.1 mouse_genomes_project 9 34252148 34260051 - MGP_LPJ_P0091442 Gm5916 protein_coding protein_coding MGP_LPJ_T0092114.1 MGP_LPJ_G0034712.1 mouse_genomes_project 9 53198807 53202401 + MGP_LPJ_P0092114 Sln protein_coding protein_coding MGP_LPJ_T0092113.1 MGP_LPJ_G0034711.1 mouse_genomes_project 9 53107668 53161405 + MGP_LPJ_P0092113 Slc35f2 protein_coding protein_coding MGP_LPJ_T0009250.1 MGP_LPJ_G0007434.1 mouse_genomes_project 9 42889710 42901396 - Gm10687 lincRNA lincRNA MGP_LPJ_T0002469.1 MGP_LPJ_G0002375.1 mouse_genomes_project 9 105263068 105265276 + TEC TEC MGP_LPJ_T0091440.1 MGP_LPJ_G0034445.1 mouse_genomes_project 9 33988916 33991847 + 9230113P08Rik protein_coding retained_intron MGP_LPJ_T0091441.1 MGP_LPJ_G0034445.1 mouse_genomes_project 9 33988935 33990029 + MGP_LPJ_P0091441 9230113P08Rik protein_coding protein_coding MGP_LPJ_T0101135.1 MGP_LPJ_G0039398.1 mouse_genomes_project 9 110097816 110097944 + Gm24944 snoRNA snoRNA MGP_LPJ_T0099846.1 MGP_LPJ_G0038109.1 mouse_genomes_project 9 76561580 76561664 - Gm25300 snRNA snRNA MGP_LPJ_T0016049.1 MGP_LPJ_G0014140.1 mouse_genomes_project 9 84865645 84867918 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091360.1 MGP_LPJ_G0034422.1 mouse_genomes_project 9 30333592 30362308 + MGP_LPJ_P0091360 Kcnj1 protein_coding protein_coding MGP_LPJ_T0091361.1 MGP_LPJ_G0034422.1 mouse_genomes_project 9 30357077 30362308 + MGP_LPJ_P0091361 Kcnj1 protein_coding protein_coding MGP_LPJ_T0090935.1 MGP_LPJ_G0034250.1 mouse_genomes_project 9 11585357 11657985 - MGP_LPJ_P0090935 Amotl1 protein_coding protein_coding MGP_LPJ_T0090936.1 MGP_LPJ_G0034250.1 mouse_genomes_project 9 11593987 11597366 - Amotl1 protein_coding retained_intron MGP_LPJ_T0090937.1 MGP_LPJ_G0034250.1 mouse_genomes_project 9 11635098 11658686 - MGP_LPJ_P0090937 Amotl1 protein_coding protein_coding MGP_LPJ_T0090938.1 MGP_LPJ_G0034250.1 mouse_genomes_project 9 11635132 11657789 - MGP_LPJ_P0090938 Amotl1 protein_coding protein_coding MGP_LPJ_T0002409.1 MGP_LPJ_G0002316.1 mouse_genomes_project 9 73567300 73569533 + TEC TEC MGP_LPJ_T0093972.1 MGP_LPJ_G0035142.1 mouse_genomes_project 9 109620617 109623476 - MGP_LPJ_P0093972 Cyb561d2 protein_coding protein_coding MGP_LPJ_T0093973.1 MGP_LPJ_G0035142.1 mouse_genomes_project 9 109621185 109623804 - MGP_LPJ_P0093973 Cyb561d2 protein_coding protein_coding MGP_LPJ_T0093974.1 MGP_LPJ_G0035142.1 mouse_genomes_project 9 109621191 109623135 - MGP_LPJ_P0093974 Cyb561d2 protein_coding protein_coding MGP_LPJ_T0093975.1 MGP_LPJ_G0035142.1 mouse_genomes_project 9 109621487 109623735 - Cyb561d2 protein_coding processed_transcript MGP_LPJ_T0093976.1 MGP_LPJ_G0035142.1 mouse_genomes_project 9 109621652 109623738 - MGP_LPJ_P0093976 Cyb561d2 protein_coding nonsense_mediated_decay MGP_LPJ_T0091630.1 MGP_LPJ_G0034560.1 mouse_genomes_project 9 38673096 38696001 + MGP_LPJ_P0091630 Zfp202 protein_coding nonsense_mediated_decay MGP_LPJ_T0091631.1 MGP_LPJ_G0034560.1 mouse_genomes_project 9 38689689 38694266 + MGP_LPJ_P0091631 Zfp202 protein_coding protein_coding MGP_LPJ_T0094610.1 MGP_LPJ_G0035235.1 mouse_genomes_project 9 112826281 112849661 - MGP_LPJ_P0094610 Ptpn23 protein_coding protein_coding MGP_LPJ_T0094611.1 MGP_LPJ_G0035235.1 mouse_genomes_project 9 112826523 112827447 - MGP_LPJ_P0094611 Ptpn23 protein_coding protein_coding MGP_LPJ_T0094612.1 MGP_LPJ_G0035235.1 mouse_genomes_project 9 112827039 112827849 - Ptpn23 protein_coding retained_intron MGP_LPJ_T0094613.1 MGP_LPJ_G0035235.1 mouse_genomes_project 9 112830469 112831694 - Ptpn23 protein_coding retained_intron MGP_LPJ_T0101095.1 MGP_LPJ_G0039358.1 mouse_genomes_project 9 39323052 39323138 + Snord14d snoRNA snoRNA MGP_LPJ_T0099831.1 MGP_LPJ_G0038094.1 mouse_genomes_project 9 65188171 65188287 - Gm25313 snRNA snRNA MGP_LPJ_T0009311.1 MGP_LPJ_G0007482.1 mouse_genomes_project 9 92561653 92568132 + lincRNA lincRNA MGP_LPJ_T0092925.1 MGP_LPJ_G0034924.1 mouse_genomes_project 9 73939428 74446869 - MGP_LPJ_P0092925 Unc13c protein_coding protein_coding MGP_LPJ_T0092926.1 MGP_LPJ_G0034924.1 mouse_genomes_project 9 73939432 74446859 - MGP_LPJ_P0092926 Unc13c protein_coding unknown_likely_coding MGP_LPJ_T0092927.1 MGP_LPJ_G0034924.1 mouse_genomes_project 9 73940870 74413365 - MGP_LPJ_P0092927 Unc13c protein_coding protein_coding MGP_LPJ_T0092979.1 MGP_LPJ_G0034939.1 mouse_genomes_project 9 76218474 76261853 - MGP_LPJ_P0092979 Scg3 protein_coding protein_coding MGP_LPJ_T0091021.1 MGP_LPJ_G0034281.1 mouse_genomes_project 9 16142846 16143812 + MGP_LPJ_P0091021 Olfr829 protein_coding protein_coding MGP_LPJ_T0093525.1 MGP_LPJ_G0035058.1 mouse_genomes_project 9 100923300 100972222 - MGP_LPJ_P0093525 Esyt3 protein_coding protein_coding MGP_LPJ_T0093526.1 MGP_LPJ_G0035058.1 mouse_genomes_project 9 100932354 100936426 - Esyt3 protein_coding retained_intron MGP_LPJ_T0093527.1 MGP_LPJ_G0035058.1 mouse_genomes_project 9 100932398 100938733 - MGP_LPJ_P0093527 Esyt3 protein_coding protein_coding MGP_LPJ_T0093528.1 MGP_LPJ_G0035058.1 mouse_genomes_project 9 100946534 100952628 - Esyt3 protein_coding retained_intron MGP_LPJ_T0093529.1 MGP_LPJ_G0035058.1 mouse_genomes_project 9 100969302 100972261 - Esyt3 protein_coding retained_intron MGP_LPJ_T0005485.1 MGP_LPJ_G0004640.1 mouse_genomes_project 9 59632117 59641134 + Gm7616 antisense antisense MGP_LPJ_T0011110.1 MGP_LPJ_G0009228.1 mouse_genomes_project 9 108156307 108156397 + Mir135a-1 miRNA miRNA MGP_LPJ_T0091549.1 MGP_LPJ_G0034491.1 mouse_genomes_project 9 36560987 36562055 + MGP_LPJ_P0091549 Olfr25 protein_coding protein_coding MGP_LPJ_T0015971.1 MGP_LPJ_G0014062.1 mouse_genomes_project 9 9887478 9888463 + processed_pseudogene processed_pseudogene MGP_LPJ_T0091575.1 MGP_LPJ_G0034511.1 mouse_genomes_project 9 37078647 37079779 + MGP_LPJ_P0091575 Olfr922 protein_coding protein_coding MGP_LPJ_T0011761.1 MGP_LPJ_G0009879.1 mouse_genomes_project 9 112534608 112534736 - Gm27855 misc_RNA misc_RNA MGP_LPJ_T0009314.1 MGP_LPJ_G0007485.1 mouse_genomes_project 9 93976845 94001301 + lincRNA lincRNA MGP_LPJ_T0009315.1 MGP_LPJ_G0007485.1 mouse_genomes_project 9 93978105 94046988 + lincRNA lincRNA MGP_LPJ_T0091522.1 MGP_LPJ_G0034469.1 mouse_genomes_project 9 35792397 35827065 + MGP_LPJ_P0091522 Siae protein_coding protein_coding MGP_LPJ_T0016058.1 MGP_LPJ_G0014149.1 mouse_genomes_project 9 89119786 89120374 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091043.1 MGP_LPJ_G0034303.1 mouse_genomes_project 9 17199045 17200080 - MGP_LPJ_P0091043 Olfr862 protein_coding protein_coding MGP_LPJ_T0094232.1 MGP_LPJ_G0035177.1 mouse_genomes_project 9 110432623 110440777 + MGP_LPJ_P0094232 Nicn1 protein_coding protein_coding MGP_LPJ_T0094233.1 MGP_LPJ_G0035177.1 mouse_genomes_project 9 110432638 110437823 + Nicn1 protein_coding retained_intron MGP_LPJ_T0094234.1 MGP_LPJ_G0035177.1 mouse_genomes_project 9 110432649 110437791 + Nicn1 protein_coding processed_transcript MGP_LPJ_T0094235.1 MGP_LPJ_G0035177.1 mouse_genomes_project 9 110438133 110439059 + Nicn1 protein_coding retained_intron MGP_LPJ_T0094129.1 MGP_LPJ_G0035161.1 mouse_genomes_project 9 110038778 110042771 + MGP_LPJ_P0094129 Actl11 protein_coding protein_coding MGP_LPJ_T0011097.1 MGP_LPJ_G0009215.1 mouse_genomes_project 9 69714152 69714240 + Mir3109 miRNA miRNA MGP_LPJ_T0091613.1 MGP_LPJ_G0034543.1 mouse_genomes_project 9 38249418 38250354 + MGP_LPJ_P0091613 Olfr970 protein_coding protein_coding MGP_LPJ_T0093571.1 MGP_LPJ_G0035069.1 mouse_genomes_project 9 102267752 102415004 + MGP_LPJ_P0093571 Stag1 protein_coding protein_coding MGP_LPJ_T0093572.1 MGP_LPJ_G0035069.1 mouse_genomes_project 9 102314920 102648697 + MGP_LPJ_P0093572 Stag1 protein_coding protein_coding MGP_LPJ_T0093573.1 MGP_LPJ_G0035069.1 mouse_genomes_project 9 102314920 102477989 + MGP_LPJ_P0093573 Stag1 protein_coding protein_coding MGP_LPJ_T0093574.1 MGP_LPJ_G0035069.1 mouse_genomes_project 9 102315072 102416520 + Stag1 protein_coding retained_intron MGP_LPJ_T0093575.1 MGP_LPJ_G0035069.1 mouse_genomes_project 9 102315085 102389715 + Stag1 protein_coding retained_intron MGP_LPJ_T0093576.1 MGP_LPJ_G0035069.1 mouse_genomes_project 9 102315085 102389734 + Stag1 protein_coding retained_intron MGP_LPJ_T0093577.1 MGP_LPJ_G0035069.1 mouse_genomes_project 9 102315085 102648696 + MGP_LPJ_P0093577 Stag1 protein_coding protein_coding MGP_LPJ_T0093578.1 MGP_LPJ_G0035069.1 mouse_genomes_project 9 102315088 102551523 + MGP_LPJ_P0093578 Stag1 protein_coding nonsense_mediated_decay MGP_LPJ_T0093579.1 MGP_LPJ_G0035069.1 mouse_genomes_project 9 102315108 102647551 + MGP_LPJ_P0093579 Stag1 protein_coding nonsense_mediated_decay MGP_LPJ_T0093580.1 MGP_LPJ_G0035069.1 mouse_genomes_project 9 102315240 102647558 + MGP_LPJ_P0093580 Stag1 protein_coding nonsense_mediated_decay MGP_LPJ_T0093581.1 MGP_LPJ_G0035069.1 mouse_genomes_project 9 102315242 102457964 + MGP_LPJ_P0093581 Stag1 protein_coding protein_coding MGP_LPJ_T0093582.1 MGP_LPJ_G0035069.1 mouse_genomes_project 9 102477901 102647568 + Stag1 protein_coding processed_transcript MGP_LPJ_T0093583.1 MGP_LPJ_G0035069.1 mouse_genomes_project 9 102517307 102531814 + Stag1 protein_coding retained_intron MGP_LPJ_T0093584.1 MGP_LPJ_G0035069.1 mouse_genomes_project 9 102527689 102646986 + MGP_LPJ_P0093584 Stag1 protein_coding protein_coding MGP_LPJ_T0093585.1 MGP_LPJ_G0035069.1 mouse_genomes_project 9 102530791 102538445 + Stag1 protein_coding retained_intron MGP_LPJ_T0093586.1 MGP_LPJ_G0035069.1 mouse_genomes_project 9 102575173 102641832 + MGP_LPJ_P0093586 Stag1 protein_coding protein_coding MGP_LPJ_T0093587.1 MGP_LPJ_G0035069.1 mouse_genomes_project 9 102645920 102649527 + Stag1 protein_coding retained_intron MGP_LPJ_T0090899.1 MGP_LPJ_G0034239.1 mouse_genomes_project 9 10285232 10292214 - MGP_LPJ_P0090899 Jrkl protein_coding protein_coding MGP_LPJ_T0091607.1 MGP_LPJ_G0034537.1 mouse_genomes_project 9 38063248 38064443 + MGP_LPJ_P0091607 Olfr963 protein_coding protein_coding MGP_LPJ_T0095076.1 MGP_LPJ_G0035362.1 mouse_genomes_project 9 126471731 126494545 + MGP_LPJ_P0095076 Exosc7 protein_coding protein_coding MGP_LPJ_T0095077.1 MGP_LPJ_G0035362.1 mouse_genomes_project 9 126471774 126478263 + Exosc7 protein_coding retained_intron MGP_LPJ_T0095078.1 MGP_LPJ_G0035362.1 mouse_genomes_project 9 126484806 126489346 + Exosc7 protein_coding processed_transcript MGP_LPJ_T0093505.1 MGP_LPJ_G0035052.1 mouse_genomes_project 9 100543791 100545032 + MGP_LPJ_P0093505 Foxl2 protein_coding protein_coding MGP_LPJ_T0094011.1 MGP_LPJ_G0035149.1 mouse_genomes_project 9 109660562 109665189 + MGP_LPJ_P0094011 Nat6 protein_coding protein_coding MGP_LPJ_T0094012.1 MGP_LPJ_G0035149.1 mouse_genomes_project 9 109660562 109665189 + MGP_LPJ_P0094012 Nat6 protein_coding protein_coding MGP_LPJ_T0094013.1 MGP_LPJ_G0035149.1 mouse_genomes_project 9 109660562 109665189 + MGP_LPJ_P0094013 Nat6 protein_coding protein_coding MGP_LPJ_T0094014.1 MGP_LPJ_G0035149.1 mouse_genomes_project 9 109660562 109665189 + MGP_LPJ_P0094014 Nat6 protein_coding protein_coding MGP_LPJ_T0094015.1 MGP_LPJ_G0035149.1 mouse_genomes_project 9 109660562 109665189 + MGP_LPJ_P0094015 Nat6 protein_coding protein_coding MGP_LPJ_T0094016.1 MGP_LPJ_G0035149.1 mouse_genomes_project 9 109660562 109665189 + MGP_LPJ_P0094016 Nat6 protein_coding protein_coding MGP_LPJ_T0094018.1 MGP_LPJ_G0035149.1 mouse_genomes_project 9 109661796 109665720 + MGP_LPJ_P0094018 Nat6 protein_coding protein_coding MGP_LPJ_T0093888.1 MGP_LPJ_G0035124.1 mouse_genomes_project 9 108528857 108531139 + MGP_LPJ_P0093888 Iqcf1 protein_coding protein_coding MGP_LPJ_T0093889.1 MGP_LPJ_G0035124.1 mouse_genomes_project 9 108528882 108531144 + MGP_LPJ_P0093889 Iqcf1 protein_coding protein_coding MGP_LPJ_T0093188.1 MGP_LPJ_G0034987.1 mouse_genomes_project 9 87344887 87504308 - MGP_LPJ_P0093188 Ube2cbp protein_coding protein_coding MGP_LPJ_T0093189.1 MGP_LPJ_G0034987.1 mouse_genomes_project 9 87345306 87504308 - MGP_LPJ_P0093189 Ube2cbp protein_coding nonsense_mediated_decay MGP_LPJ_T0091554.1 MGP_LPJ_G0034496.1 mouse_genomes_project 9 36687151 36688207 + MGP_LPJ_P0091554 Olfr902 protein_coding protein_coding MGP_LPJ_T0016064.1 MGP_LPJ_G0014155.1 mouse_genomes_project 9 91409379 91409663 - processed_pseudogene processed_pseudogene MGP_LPJ_T0018505.1 MGP_LPJ_G0015666.1 mouse_genomes_project 9 80705473 80705906 + Gm3211 processed_transcript processed_transcript MGP_LPJ_T0092614.1 MGP_LPJ_G0034863.1 mouse_genomes_project 9 65866112 65921966 - MGP_LPJ_P0092614 Trip4 protein_coding protein_coding MGP_LPJ_T0092615.1 MGP_LPJ_G0034863.1 mouse_genomes_project 9 65871742 65889515 - Trip4 protein_coding retained_intron MGP_LPJ_T0092616.1 MGP_LPJ_G0034863.1 mouse_genomes_project 9 65917933 65947393 - MGP_LPJ_P0092616 Trip4 protein_coding protein_coding MGP_LPJ_T0092620.1 MGP_LPJ_G0034863.1 mouse_genomes_project 9 65933161 65947326 - Trip4 protein_coding processed_transcript MGP_LPJ_T0092621.1 MGP_LPJ_G0034863.1 mouse_genomes_project 9 65933499 65947393 - Trip4 protein_coding processed_transcript MGP_LPJ_T0092622.1 MGP_LPJ_G0034863.1 mouse_genomes_project 9 65933965 65947401 - Trip4 protein_coding processed_transcript MGP_LPJ_T0092623.1 MGP_LPJ_G0034863.1 mouse_genomes_project 9 65936888 65947393 - Trip4 protein_coding retained_intron MGP_LPJ_T0091941.1 MGP_LPJ_G0034652.1 mouse_genomes_project 9 47452751 47475477 - MGP_LPJ_P0091941 Nxpe2 protein_coding protein_coding MGP_LPJ_T0091942.1 MGP_LPJ_G0034652.1 mouse_genomes_project 9 47453889 47475413 - MGP_LPJ_P0091942 Nxpe2 protein_coding nonsense_mediated_decay MGP_LPJ_T0091943.1 MGP_LPJ_G0034652.1 mouse_genomes_project 9 47461149 47488067 - MGP_LPJ_P0091943 Nxpe2 protein_coding protein_coding MGP_LPJ_T0091944.1 MGP_LPJ_G0034652.1 mouse_genomes_project 9 47465907 47475433 - Nxpe2 protein_coding processed_transcript MGP_LPJ_T0091945.1 MGP_LPJ_G0034652.1 mouse_genomes_project 9 47466235 47488067 - Nxpe2 protein_coding processed_transcript MGP_LPJ_T0093081.1 MGP_LPJ_G0034968.1 mouse_genomes_project 9 80550249 80554876 - MGP_LPJ_P0093081 Cox7a2 protein_coding protein_coding MGP_LPJ_T0092576.1 MGP_LPJ_G0034847.1 mouse_genomes_project 9 65208395 65238022 + MGP_LPJ_P0092576 Parp16 protein_coding protein_coding MGP_LPJ_T0093022.1 MGP_LPJ_G0034950.1 mouse_genomes_project 9 78608102 78683083 + MGP_LPJ_P0093022 Elovl5 protein_coding protein_coding MGP_LPJ_T0093023.1 MGP_LPJ_G0034950.1 mouse_genomes_project 9 78608172 78652000 + Elovl5 protein_coding retained_intron MGP_LPJ_T0093024.1 MGP_LPJ_G0034950.1 mouse_genomes_project 9 78614363 78678429 + MGP_LPJ_P0093024 Elovl5 protein_coding protein_coding MGP_LPJ_T0093025.1 MGP_LPJ_G0034950.1 mouse_genomes_project 9 78633605 78655292 + MGP_LPJ_P0093025 Elovl5 protein_coding protein_coding MGP_LPJ_T0094684.1 MGP_LPJ_G0035252.1 mouse_genomes_project 9 113360518 113363371 + Als2cl protein_coding processed_transcript MGP_LPJ_T0094685.1 MGP_LPJ_G0035252.1 mouse_genomes_project 9 113360822 113381191 + MGP_LPJ_P0094685 Als2cl protein_coding protein_coding MGP_LPJ_T0094686.1 MGP_LPJ_G0035252.1 mouse_genomes_project 9 113360854 113381197 + MGP_LPJ_P0094686 Als2cl protein_coding protein_coding MGP_LPJ_T0094687.1 MGP_LPJ_G0035252.1 mouse_genomes_project 9 113360881 113365542 + MGP_LPJ_P0094687 Als2cl protein_coding protein_coding MGP_LPJ_T0094688.1 MGP_LPJ_G0035252.1 mouse_genomes_project 9 113360985 113381194 + MGP_LPJ_P0094688 Als2cl protein_coding protein_coding MGP_LPJ_T0094689.1 MGP_LPJ_G0035252.1 mouse_genomes_project 9 113366409 113367970 + Als2cl protein_coding retained_intron MGP_LPJ_T0094690.1 MGP_LPJ_G0035252.1 mouse_genomes_project 9 113366950 113370796 + Als2cl protein_coding retained_intron MGP_LPJ_T0094691.1 MGP_LPJ_G0035252.1 mouse_genomes_project 9 113368638 113381195 + Als2cl protein_coding processed_transcript MGP_LPJ_T0092494.1 MGP_LPJ_G0034825.1 mouse_genomes_project 9 63272379 63276760 - 2300009A05Rik protein_coding processed_transcript MGP_LPJ_T0092495.1 MGP_LPJ_G0034825.1 mouse_genomes_project 9 63272379 63277174 - MGP_LPJ_P0092495 2300009A05Rik protein_coding protein_coding MGP_LPJ_T0092496.1 MGP_LPJ_G0034825.1 mouse_genomes_project 9 63272380 63276760 - 2300009A05Rik protein_coding processed_transcript MGP_LPJ_T0092497.1 MGP_LPJ_G0034825.1 mouse_genomes_project 9 63275408 63277179 - 2300009A05Rik protein_coding retained_intron MGP_LPJ_T0101130.1 MGP_LPJ_G0039393.1 mouse_genomes_project 9 102929757 102929884 + Gm24338 snoRNA snoRNA MGP_LPJ_T0016089.1 MGP_LPJ_G0014180.1 mouse_genomes_project 9 98752834 98755675 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011123.1 MGP_LPJ_G0009241.1 mouse_genomes_project 9 113411126 113411203 + Gm24269 miRNA miRNA MGP_LPJ_T0002482.1 MGP_LPJ_G0002388.1 mouse_genomes_project 9 109925957 109927033 - TEC TEC MGP_LPJ_T0092087.1 MGP_LPJ_G0034703.1 mouse_genomes_project 9 52621273 52703668 + MGP_LPJ_P0092087 Exph5 protein_coding protein_coding MGP_LPJ_T0092088.1 MGP_LPJ_G0034703.1 mouse_genomes_project 9 52664805 52695107 + Exph5 protein_coding retained_intron MGP_LPJ_T0092089.1 MGP_LPJ_G0034703.1 mouse_genomes_project 9 52664910 52681270 + Exph5 protein_coding retained_intron MGP_LPJ_T0005568.1 MGP_LPJ_G0004697.1 mouse_genomes_project 9 110108861 110113162 - 4930535L15Rik antisense antisense MGP_LPJ_T0002448.1 MGP_LPJ_G0002354.1 mouse_genomes_project 9 100275704 100276219 - TEC TEC MGP_LPJ_T0009237.1 MGP_LPJ_G0007424.1 mouse_genomes_project 9 32624270 32625049 - Gm26662 lincRNA lincRNA MGP_LPJ_T0018515.1 MGP_LPJ_G0015670.1 mouse_genomes_project 9 89670457 89985758 - processed_transcript antisense MGP_LPJ_T0018516.1 MGP_LPJ_G0015670.1 mouse_genomes_project 9 89754672 89772191 - processed_transcript antisense MGP_LPJ_T0093618.1 MGP_LPJ_G0035077.1 mouse_genomes_project 9 104399746 104407894 + MGP_LPJ_P0093618 Anapc13 protein_coding protein_coding MGP_LPJ_T0093619.1 MGP_LPJ_G0035077.1 mouse_genomes_project 9 104399774 104407719 + MGP_LPJ_P0093619 Anapc13 protein_coding protein_coding MGP_LPJ_T0093620.1 MGP_LPJ_G0035077.1 mouse_genomes_project 9 104400113 104407711 + MGP_LPJ_P0093620 Anapc13 protein_coding protein_coding MGP_LPJ_T0093621.1 MGP_LPJ_G0035077.1 mouse_genomes_project 9 104400129 104407711 + MGP_LPJ_P0093621 Anapc13 protein_coding protein_coding MGP_LPJ_T0093622.1 MGP_LPJ_G0035077.1 mouse_genomes_project 9 104401964 104403180 + Anapc13 protein_coding retained_intron MGP_LPJ_T0091012.1 MGP_LPJ_G0034275.1 mouse_genomes_project 9 15691102 15693959 + MGP_LPJ_P0091012 Mbd3l2 protein_coding protein_coding MGP_LPJ_T0091557.1 MGP_LPJ_G0034499.1 mouse_genomes_project 9 36731133 36732069 + MGP_LPJ_P0091557 Olfr906 protein_coding protein_coding MGP_LPJ_T0018518.1 MGP_LPJ_G0015672.1 mouse_genomes_project 9 98241031 98250303 + C430002N11Rik processed_transcript retained_intron MGP_LPJ_T0018519.1 MGP_LPJ_G0015672.1 mouse_genomes_project 9 98241044 98251161 + C430002N11Rik processed_transcript retained_intron MGP_LPJ_T0018520.1 MGP_LPJ_G0015672.1 mouse_genomes_project 9 98241044 98259225 + C430002N11Rik processed_transcript lincRNA MGP_LPJ_T0018521.1 MGP_LPJ_G0015672.1 mouse_genomes_project 9 98241054 98250315 + C430002N11Rik processed_transcript retained_intron MGP_LPJ_T0018522.1 MGP_LPJ_G0015672.1 mouse_genomes_project 9 98241070 98249994 + C430002N11Rik processed_transcript lincRNA MGP_LPJ_T0101144.1 MGP_LPJ_G0039407.1 mouse_genomes_project 9 123288014 123288217 + Gm26448 snoRNA snoRNA MGP_LPJ_T0016106.1 MGP_LPJ_G0014197.1 mouse_genomes_project 9 105174855 105175990 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091047.1 MGP_LPJ_G0034307.1 mouse_genomes_project 9 17402099 17405159 + MGP_LPJ_P0091047 Olfr868 protein_coding protein_coding MGP_LPJ_T0091237.1 MGP_LPJ_G0034382.1 mouse_genomes_project 9 19765370 19799107 - MGP_LPJ_P0091237 Zfp810 protein_coding protein_coding MGP_LPJ_T0099867.1 MGP_LPJ_G0038130.1 mouse_genomes_project 9 113567308 113567371 + Gm26409 snRNA snRNA MGP_LPJ_T0091541.1 MGP_LPJ_G0034483.1 mouse_genomes_project 9 36325321 36326506 + MGP_LPJ_P0091541 Olfr888 protein_coding protein_coding MGP_LPJ_T0091614.1 MGP_LPJ_G0034544.1 mouse_genomes_project 9 38270482 38271406 + MGP_LPJ_P0091614 Olfr971 protein_coding protein_coding MGP_LPJ_T0002477.1 MGP_LPJ_G0002383.1 mouse_genomes_project 9 107103805 107105253 + TEC TEC MGP_LPJ_T0099828.1 MGP_LPJ_G0038091.1 mouse_genomes_project 9 62893150 62893308 + Gm24526 snRNA snRNA MGP_LPJ_T0093396.1 MGP_LPJ_G0035032.1 mouse_genomes_project 9 97265248 97277195 + Atr protein_coding retained_intron MGP_LPJ_T0093397.1 MGP_LPJ_G0035032.1 mouse_genomes_project 9 97265248 97368851 + MGP_LPJ_P0093397 Atr protein_coding protein_coding MGP_LPJ_T0093398.1 MGP_LPJ_G0035032.1 mouse_genomes_project 9 97265290 97317949 + Atr protein_coding retained_intron MGP_LPJ_T0093399.1 MGP_LPJ_G0035032.1 mouse_genomes_project 9 97265301 97271192 + Atr protein_coding retained_intron MGP_LPJ_T0093400.1 MGP_LPJ_G0035032.1 mouse_genomes_project 9 97265306 97269407 + Atr protein_coding retained_intron MGP_LPJ_T0093401.1 MGP_LPJ_G0035032.1 mouse_genomes_project 9 97265320 97278787 + Atr protein_coding retained_intron MGP_LPJ_T0093402.1 MGP_LPJ_G0035032.1 mouse_genomes_project 9 97265376 97368831 + MGP_LPJ_P0093402 Atr protein_coding unknown_likely_coding MGP_LPJ_T0093403.1 MGP_LPJ_G0035032.1 mouse_genomes_project 9 97298553 97302326 + Atr protein_coding retained_intron MGP_LPJ_T0093404.1 MGP_LPJ_G0035032.1 mouse_genomes_project 9 97329586 97333744 + Atr protein_coding retained_intron MGP_LPJ_T0093405.1 MGP_LPJ_G0035032.1 mouse_genomes_project 9 97351541 97353316 + Atr protein_coding retained_intron MGP_LPJ_T0093406.1 MGP_LPJ_G0035032.1 mouse_genomes_project 9 97354650 97358367 + Atr protein_coding retained_intron MGP_LPJ_T0002440.1 MGP_LPJ_G0002346.1 mouse_genomes_project 9 93007111 93007936 - TEC TEC MGP_LPJ_T0094160.1 MGP_LPJ_G0035166.1 mouse_genomes_project 9 110094668 110096324 - MGP_LPJ_P0094160 Fam212a protein_coding protein_coding MGP_LPJ_T0094161.1 MGP_LPJ_G0035166.1 mouse_genomes_project 9 110095078 110096077 - MGP_LPJ_P0094161 Fam212a protein_coding protein_coding MGP_LPJ_T0005477.1 MGP_LPJ_G0004636.1 mouse_genomes_project 9 56561716 56593958 - Man2c1os antisense antisense MGP_LPJ_T0005478.1 MGP_LPJ_G0004636.1 mouse_genomes_project 9 56590771 56593566 - Man2c1os antisense antisense MGP_LPJ_T0005479.1 MGP_LPJ_G0004636.1 mouse_genomes_project 9 56592643 56593912 - Man2c1os antisense antisense MGP_LPJ_T0092021.1 MGP_LPJ_G0034683.1 mouse_genomes_project 9 50008502 50009778 - MGP_LPJ_P0092021 Hspb2 protein_coding protein_coding MGP_LPJ_T0016097.1 MGP_LPJ_G0014188.1 mouse_genomes_project 9 102994243 102994649 - processed_pseudogene processed_pseudogene MGP_LPJ_T0093457.1 MGP_LPJ_G0035040.1 mouse_genomes_project 9 98301166 98371146 - MGP_LPJ_P0093457 Pxylp1 protein_coding protein_coding MGP_LPJ_T0093458.1 MGP_LPJ_G0035040.1 mouse_genomes_project 9 98301174 98371162 - MGP_LPJ_P0093458 Pxylp1 protein_coding protein_coding MGP_LPJ_T0093459.1 MGP_LPJ_G0035040.1 mouse_genomes_project 9 98301174 98371207 - MGP_LPJ_P0093459 Pxylp1 protein_coding protein_coding MGP_LPJ_T0093460.1 MGP_LPJ_G0035040.1 mouse_genomes_project 9 98301416 98371166 - MGP_LPJ_P0093460 Pxylp1 protein_coding protein_coding MGP_LPJ_T0093461.1 MGP_LPJ_G0035040.1 mouse_genomes_project 9 98303246 98371161 - MGP_LPJ_P0093461 Pxylp1 protein_coding protein_coding MGP_LPJ_T0093462.1 MGP_LPJ_G0035040.1 mouse_genomes_project 9 98303417 98341284 - MGP_LPJ_P0093462 Pxylp1 protein_coding protein_coding MGP_LPJ_T0093463.1 MGP_LPJ_G0035040.1 mouse_genomes_project 9 98316918 98333306 - Pxylp1 protein_coding processed_transcript MGP_LPJ_T0093464.1 MGP_LPJ_G0035040.1 mouse_genomes_project 9 98317028 98374402 - MGP_LPJ_P0093464 Pxylp1 protein_coding protein_coding MGP_LPJ_T0093465.1 MGP_LPJ_G0035040.1 mouse_genomes_project 9 98317717 98371153 - Pxylp1 protein_coding retained_intron MGP_LPJ_T0093466.1 MGP_LPJ_G0035040.1 mouse_genomes_project 9 98317834 98341361 - MGP_LPJ_P0093466 Pxylp1 protein_coding protein_coding MGP_LPJ_T0093467.1 MGP_LPJ_G0035040.1 mouse_genomes_project 9 98334851 98341363 - Pxylp1 protein_coding processed_transcript MGP_LPJ_T0093468.1 MGP_LPJ_G0035040.1 mouse_genomes_project 9 98339183 98373823 - Pxylp1 protein_coding processed_transcript MGP_LPJ_T0093469.1 MGP_LPJ_G0035040.1 mouse_genomes_project 9 98369363 98371166 - Pxylp1 protein_coding retained_intron MGP_LPJ_T0101621.1 MGP_LPJ_G0035291.1 mouse_genomes_project 9 120884680 121008288 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101622.1 MGP_LPJ_G0035291.1 mouse_genomes_project 9 120922486 121008450 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101623.1 MGP_LPJ_G0035291.1 mouse_genomes_project 9 120975148 121008450 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0101624.1 MGP_LPJ_G0035291.1 mouse_genomes_project 9 121007110 121039110 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0099860.1 MGP_LPJ_G0038123.1 mouse_genomes_project 9 105361912 105362015 - Gm26360 snRNA snRNA MGP_LPJ_T0000383.1 MGP_LPJ_G0000321.1 mouse_genomes_project 9 126465621 126465688 - mt-Tw Mt_tRNA Mt_tRNA MGP_LPJ_T0009304.1 MGP_LPJ_G0007477.1 mouse_genomes_project 9 89334180 89337322 + Gm28231 lincRNA lincRNA MGP_LPJ_T0011750.1 MGP_LPJ_G0009868.1 mouse_genomes_project 9 43151319 43151596 + Gm22141 misc_RNA misc_RNA MGP_LPJ_T0009224.1 MGP_LPJ_G0007411.1 mouse_genomes_project 9 18389004 18392497 - Gm26592 lincRNA lincRNA MGP_LPJ_T0091008.1 MGP_LPJ_G0034273.1 mouse_genomes_project 9 15648917 15658308 + MGP_LPJ_P0091008 Ubtfl1 protein_coding protein_coding MGP_LPJ_T0091009.1 MGP_LPJ_G0034273.1 mouse_genomes_project 9 15648919 15656539 + MGP_LPJ_P0091009 Ubtfl1 protein_coding protein_coding MGP_LPJ_T0091010.1 MGP_LPJ_G0034273.1 mouse_genomes_project 9 15654422 15656071 + MGP_LPJ_P0091010 Ubtfl1 protein_coding protein_coding MGP_LPJ_T0092371.1 MGP_LPJ_G0034794.1 mouse_genomes_project 9 58953221 58986045 - MGP_LPJ_P0092371 Bbs4 protein_coding protein_coding MGP_LPJ_T0095061.1 MGP_LPJ_G0035360.1 mouse_genomes_project 9 126386805 126387898 + Tgm4 protein_coding processed_transcript MGP_LPJ_T0095062.1 MGP_LPJ_G0035360.1 mouse_genomes_project 9 126386807 126408111 + Tgm4 protein_coding processed_transcript MGP_LPJ_T0095063.1 MGP_LPJ_G0035360.1 mouse_genomes_project 9 126386807 126424153 + MGP_LPJ_P0095063 Tgm4 protein_coding protein_coding MGP_LPJ_T0095064.1 MGP_LPJ_G0035360.1 mouse_genomes_project 9 126394009 126405689 + Tgm4 protein_coding retained_intron MGP_LPJ_T0016002.1 MGP_LPJ_G0014093.1 mouse_genomes_project 9 58282260 58282428 - processed_pseudogene processed_pseudogene MGP_LPJ_T0092611.1 MGP_LPJ_G0034862.1 mouse_genomes_project 9 65716963 65860302 - MGP_LPJ_P0092611 Zfp609 protein_coding protein_coding MGP_LPJ_T0092612.1 MGP_LPJ_G0034862.1 mouse_genomes_project 9 65724443 65725718 - Zfp609 protein_coding processed_transcript MGP_LPJ_T0092613.1 MGP_LPJ_G0034862.1 mouse_genomes_project 9 65824251 65828010 - MGP_LPJ_P0092613 Zfp609 protein_coding protein_coding MGP_LPJ_T0016078.1 MGP_LPJ_G0014169.1 mouse_genomes_project 9 95761715 95762061 + processed_pseudogene processed_pseudogene MGP_LPJ_T0091389.1 MGP_LPJ_G0034429.1 mouse_genomes_project 9 33256039 33269211 + Srpr protein_coding processed_transcript MGP_LPJ_T0091402.1 MGP_LPJ_G0034429.1 mouse_genomes_project 9 33266823 33272407 + MGP_LPJ_P0091402 Srpr protein_coding protein_coding MGP_LPJ_T0091403.1 MGP_LPJ_G0034429.1 mouse_genomes_project 9 33267566 33268526 + Srpr protein_coding retained_intron MGP_LPJ_T0091404.1 MGP_LPJ_G0034429.1 mouse_genomes_project 9 33270573 33305259 + MGP_LPJ_P0091404 Srpr protein_coding protein_coding MGP_LPJ_T0005495.1 MGP_LPJ_G0004647.1 mouse_genomes_project 9 70268740 70270309 - Gm28731 antisense antisense MGP_LPJ_T0002408.1 MGP_LPJ_G0002315.1 mouse_genomes_project 9 73449863 73451707 + TEC TEC MGP_LPJ_T0011073.1 MGP_LPJ_G0009191.1 mouse_genomes_project 9 40090740 40090820 + Mir100 miRNA miRNA MGP_LPJ_T0091534.1 MGP_LPJ_G0034477.1 mouse_genomes_project 9 36115354 36116419 + MGP_LPJ_P0091534 Olfr878 protein_coding protein_coding MGP_LPJ_T0002473.1 MGP_LPJ_G0002379.1 mouse_genomes_project 9 105897751 105899924 - TEC TEC MGP_LPJ_T0091000.1 MGP_LPJ_G0034272.1 mouse_genomes_project 9 15565292 15642068 - MGP_LPJ_P0091000 Naalad2 protein_coding protein_coding MGP_LPJ_T0091001.1 MGP_LPJ_G0034272.1 mouse_genomes_project 9 15566361 15627603 - MGP_LPJ_P0091001 Naalad2 protein_coding protein_coding MGP_LPJ_T0091002.1 MGP_LPJ_G0034272.1 mouse_genomes_project 9 15566362 15635418 - MGP_LPJ_P0091002 Naalad2 protein_coding protein_coding MGP_LPJ_T0091003.1 MGP_LPJ_G0034272.1 mouse_genomes_project 9 15621771 15627489 - Naalad2 protein_coding retained_intron MGP_LPJ_T0091004.1 MGP_LPJ_G0034272.1 mouse_genomes_project 9 15626624 15647503 - MGP_LPJ_P0091004 Naalad2 protein_coding protein_coding MGP_LPJ_T0091005.1 MGP_LPJ_G0034272.1 mouse_genomes_project 9 15627395 15647505 - MGP_LPJ_P0091005 Naalad2 protein_coding protein_coding MGP_LPJ_T0091006.1 MGP_LPJ_G0034272.1 mouse_genomes_project 9 15629667 15647526 - MGP_LPJ_P0091006 Naalad2 protein_coding protein_coding MGP_LPJ_T0091007.1 MGP_LPJ_G0034272.1 mouse_genomes_project 9 15629773 15647507 - Naalad2 protein_coding processed_transcript MGP_LPJ_T0094859.1 MGP_LPJ_G0035293.1 mouse_genomes_project 9 121067431 121148764 - MGP_LPJ_P0094859 Cmc1 protein_coding protein_coding MGP_LPJ_T0101143.1 MGP_LPJ_G0039406.1 mouse_genomes_project 9 123287443 123287599 + Gm24044 snoRNA snoRNA MGP_LPJ_T0016045.1 MGP_LPJ_G0014136.1 mouse_genomes_project 9 83365492 83365820 + processed_pseudogene processed_pseudogene MGP_LPJ_T0090885.1 MGP_LPJ_G0034234.1 mouse_genomes_project 9 5415232 5575431 + MGP_LPJ_P0090885 Trpc6 protein_coding protein_coding MGP_LPJ_T0011114.1 MGP_LPJ_G0009232.1 mouse_genomes_project 9 110220523 110220641 - miRNA miRNA MGP_LPJ_T0016026.1 MGP_LPJ_G0014117.1 mouse_genomes_project 9 75091039 75091229 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009254.1 MGP_LPJ_G0007437.1 mouse_genomes_project 9 45280366 45284733 - 4930448E22Rik lincRNA lincRNA MGP_LPJ_T0094442.1 MGP_LPJ_G0035207.1 mouse_genomes_project 9 111124294 111125449 + MGP_LPJ_P0094442 Ucn2 protein_coding protein_coding MGP_LPJ_T0090968.1 MGP_LPJ_G0034261.1 mouse_genomes_project 9 12342772 12362272 - MGP_LPJ_P0090968 Med17 protein_coding protein_coding MGP_LPJ_T0016015.1 MGP_LPJ_G0014106.1 mouse_genomes_project 9 72475336 72476141 + processed_pseudogene processed_pseudogene MGP_LPJ_T0016040.1 MGP_LPJ_G0014131.1 mouse_genomes_project 9 80638929 80639209 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009317.1 MGP_LPJ_G0007487.1 mouse_genomes_project 9 94256836 94286158 - 1700034K08Rik lincRNA lincRNA MGP_LPJ_T0009318.1 MGP_LPJ_G0007487.1 mouse_genomes_project 9 94256836 94267599 - 1700034K08Rik lincRNA lincRNA MGP_LPJ_T0009319.1 MGP_LPJ_G0007487.1 mouse_genomes_project 9 94256917 94286164 - 1700034K08Rik lincRNA lincRNA MGP_LPJ_T0009320.1 MGP_LPJ_G0007487.1 mouse_genomes_project 9 94282231 94286155 - 1700034K08Rik lincRNA lincRNA MGP_LPJ_T0016082.1 MGP_LPJ_G0014173.1 mouse_genomes_project 9 97073591 97074180 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016005.1 MGP_LPJ_G0014096.1 mouse_genomes_project 9 59433249 59433741 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091075.1 MGP_LPJ_G0034319.1 mouse_genomes_project 9 17891850 17923769 + MGP_LPJ_P0091075 Zfp846 protein_coding protein_coding MGP_LPJ_T0091076.1 MGP_LPJ_G0034319.1 mouse_genomes_project 9 17892050 17923771 + MGP_LPJ_P0091076 Zfp846 protein_coding nonsense_mediated_decay MGP_LPJ_T0091077.1 MGP_LPJ_G0034319.1 mouse_genomes_project 9 17899178 17923048 + MGP_LPJ_P0091077 Zfp846 protein_coding protein_coding MGP_LPJ_T0009248.1 MGP_LPJ_G0007432.1 mouse_genomes_project 9 42172338 42173234 + Gm28215 lincRNA lincRNA MGP_LPJ_T0091588.1 MGP_LPJ_G0034524.1 mouse_genomes_project 9 37528197 37529133 + MGP_LPJ_P0091588 Olfr944 protein_coding protein_coding MGP_LPJ_T0009368.1 MGP_LPJ_G0007526.1 mouse_genomes_project 9 124162142 124163621 - 1700020M21Rik lincRNA lincRNA MGP_LPJ_T0099865.1 MGP_LPJ_G0038128.1 mouse_genomes_project 9 110015568 110015667 + Gm23856 snRNA snRNA MGP_LPJ_T0090813.1 MGP_LPJ_G0034210.1 mouse_genomes_project 9 1171049 1562212 - MGP_LPJ_P0090813 Gria4 protein_coding protein_coding MGP_LPJ_T0090814.1 MGP_LPJ_G0034210.1 mouse_genomes_project 9 1171049 1562212 - MGP_LPJ_P0090814 Gria4 protein_coding protein_coding MGP_LPJ_T0090815.1 MGP_LPJ_G0034210.1 mouse_genomes_project 9 1240279 1562212 - MGP_LPJ_P0090815 Gria4 protein_coding protein_coding MGP_LPJ_T0092975.1 MGP_LPJ_G0034937.1 mouse_genomes_project 9 76140902 76186597 - MGP_LPJ_P0092975 Tmod2 protein_coding protein_coding MGP_LPJ_T0092976.1 MGP_LPJ_G0034937.1 mouse_genomes_project 9 76140902 76174362 - MGP_LPJ_P0092976 Tmod2 protein_coding protein_coding MGP_LPJ_T0092977.1 MGP_LPJ_G0034937.1 mouse_genomes_project 9 76148997 76172881 - MGP_LPJ_P0092977 Tmod2 protein_coding protein_coding MGP_LPJ_T0093171.1 MGP_LPJ_G0034983.1 mouse_genomes_project 9 84830654 85030860 + MGP_LPJ_P0093171 Bckdhb protein_coding protein_coding MGP_LPJ_T0093172.1 MGP_LPJ_G0034983.1 mouse_genomes_project 9 84830679 84973817 + MGP_LPJ_P0093172 Bckdhb protein_coding protein_coding MGP_LPJ_T0093173.1 MGP_LPJ_G0034983.1 mouse_genomes_project 9 84850021 85030861 + MGP_LPJ_P0093173 Bckdhb protein_coding protein_coding MGP_LPJ_T0093174.1 MGP_LPJ_G0034983.1 mouse_genomes_project 9 84939234 85030819 + Bckdhb protein_coding processed_transcript MGP_LPJ_T0093175.1 MGP_LPJ_G0034983.1 mouse_genomes_project 9 84949923 85030860 + Bckdhb protein_coding processed_transcript MGP_LPJ_T0093176.1 MGP_LPJ_G0034983.1 mouse_genomes_project 9 85013051 85030861 + Bckdhb protein_coding processed_transcript MGP_LPJ_T0091219.1 MGP_LPJ_G0034373.1 mouse_genomes_project 9 19500458 19516165 - MGP_LPJ_P0091219 Zfp653 protein_coding protein_coding MGP_LPJ_T0091220.1 MGP_LPJ_G0034373.1 mouse_genomes_project 9 19500458 19516165 - MGP_LPJ_P0091220 Zfp653 protein_coding protein_coding MGP_LPJ_T0002457.1 MGP_LPJ_G0002363.1 mouse_genomes_project 9 102814929 102816963 + TEC TEC MGP_LPJ_T0091334.1 MGP_LPJ_G0034415.1 mouse_genomes_project 9 29030535 29093743 - MGP_LPJ_P0091334 Aplp2 protein_coding protein_coding MGP_LPJ_T0091335.1 MGP_LPJ_G0034415.1 mouse_genomes_project 9 29030535 29093743 - MGP_LPJ_P0091335 Aplp2 protein_coding protein_coding MGP_LPJ_T0009342.1 MGP_LPJ_G0007507.1 mouse_genomes_project 9 109303826 109306613 + 1700039M15Rik lincRNA lincRNA MGP_LPJ_T0091359.1 MGP_LPJ_G0034421.1 mouse_genomes_project 9 30274193 30304065 - MGP_LPJ_P0091359 Kcnj5 protein_coding protein_coding MGP_LPJ_T0092199.1 MGP_LPJ_G0034741.1 mouse_genomes_project 9 55397451 55407703 - MGP_LPJ_P0092199 4930563M21Rik protein_coding protein_coding MGP_LPJ_T0093698.1 MGP_LPJ_G0035093.1 mouse_genomes_project 9 105900742 105916956 - MGP_LPJ_P0093698 Uba5 protein_coding protein_coding MGP_LPJ_T0093699.1 MGP_LPJ_G0035093.1 mouse_genomes_project 9 105901791 105910922 - MGP_LPJ_P0093699 Uba5 protein_coding protein_coding MGP_LPJ_T0093700.1 MGP_LPJ_G0035093.1 mouse_genomes_project 9 105903725 105916885 - MGP_LPJ_P0093700 Uba5 protein_coding nonsense_mediated_decay MGP_LPJ_T0093701.1 MGP_LPJ_G0035093.1 mouse_genomes_project 9 105911504 105914285 - Uba5 protein_coding retained_intron MGP_LPJ_T0093033.1 MGP_LPJ_G0034953.1 mouse_genomes_project 9 78807575 78866346 + MGP_LPJ_P0093033 Ick protein_coding protein_coding MGP_LPJ_T0093034.1 MGP_LPJ_G0034953.1 mouse_genomes_project 9 78807618 78811813 + MGP_LPJ_P0093034 Ick protein_coding protein_coding MGP_LPJ_T0093035.1 MGP_LPJ_G0034953.1 mouse_genomes_project 9 78811226 78816853 + Ick protein_coding processed_transcript MGP_LPJ_T0093036.1 MGP_LPJ_G0034953.1 mouse_genomes_project 9 78811624 78832559 + Ick protein_coding retained_intron MGP_LPJ_T0093037.1 MGP_LPJ_G0034953.1 mouse_genomes_project 9 78811667 78824040 + MGP_LPJ_P0093037 Ick protein_coding protein_coding MGP_LPJ_T0093038.1 MGP_LPJ_G0034953.1 mouse_genomes_project 9 78811683 78863821 + MGP_LPJ_P0093038 Ick protein_coding protein_coding MGP_LPJ_T0093039.1 MGP_LPJ_G0034953.1 mouse_genomes_project 9 78811698 78870515 + MGP_LPJ_P0093039 Ick protein_coding protein_coding MGP_LPJ_T0093040.1 MGP_LPJ_G0034953.1 mouse_genomes_project 9 78853711 78868861 + Ick protein_coding retained_intron MGP_LPJ_T0005581.1 MGP_LPJ_G0004710.1 mouse_genomes_project 9 118874264 118886854 - Gm16142 antisense antisense MGP_LPJ_T0094615.1 MGP_LPJ_G0035237.1 mouse_genomes_project 9 112873189 112926502 - MGP_LPJ_P0094615 Klhl18 protein_coding protein_coding MGP_LPJ_T0094616.1 MGP_LPJ_G0035237.1 mouse_genomes_project 9 112873197 112926498 - MGP_LPJ_P0094616 Klhl18 protein_coding nonsense_mediated_decay MGP_LPJ_T0094617.1 MGP_LPJ_G0035237.1 mouse_genomes_project 9 112873197 112926597 - MGP_LPJ_P0094617 Klhl18 protein_coding protein_coding MGP_LPJ_T0094618.1 MGP_LPJ_G0035237.1 mouse_genomes_project 9 112880554 112882417 - Klhl18 protein_coding retained_intron MGP_LPJ_T0094619.1 MGP_LPJ_G0035237.1 mouse_genomes_project 9 112886009 112903732 - MGP_LPJ_P0094619 Klhl18 protein_coding protein_coding MGP_LPJ_T0094620.1 MGP_LPJ_G0035237.1 mouse_genomes_project 9 112887228 112894777 - Klhl18 protein_coding retained_intron MGP_LPJ_T0101078.1 MGP_LPJ_G0039341.1 mouse_genomes_project 9 12401711 12401811 + snoRNA snoRNA MGP_LPJ_T0092980.1 MGP_LPJ_G0034940.1 mouse_genomes_project 9 76343875 76488793 + MGP_LPJ_P0092980 Bmp5 protein_coding protein_coding MGP_LPJ_T0092981.1 MGP_LPJ_G0034940.1 mouse_genomes_project 9 76408577 76425154 + Bmp5 protein_coding processed_transcript MGP_LPJ_T0090963.1 MGP_LPJ_G0034258.1 mouse_genomes_project 9 12071941 12118159 - MGP_LPJ_P0090963 Panx1 protein_coding protein_coding MGP_LPJ_T0090964.1 MGP_LPJ_G0034258.1 mouse_genomes_project 9 12071943 12118600 - MGP_LPJ_P0090964 Panx1 protein_coding nonsense_mediated_decay MGP_LPJ_T0090965.1 MGP_LPJ_G0034258.1 mouse_genomes_project 9 12074076 12076666 - Panx1 protein_coding retained_intron MGP_LPJ_T0091017.1 MGP_LPJ_G0034277.1 mouse_genomes_project 9 15733574 15746891 + MGP_LPJ_P0091017 Mbd3l1 protein_coding protein_coding MGP_LPJ_T0092721.1 MGP_LPJ_G0034886.1 mouse_genomes_project 9 69653842 69688955 + protein_coding retained_intron MGP_LPJ_T0092722.1 MGP_LPJ_G0034886.1 mouse_genomes_project 9 69653842 69689054 + MGP_LPJ_P0092722 protein_coding unknown_likely_coding MGP_LPJ_T0092723.1 MGP_LPJ_G0034886.1 mouse_genomes_project 9 69653846 69664214 + MGP_LPJ_P0092723 protein_coding protein_coding MGP_LPJ_T0092724.1 MGP_LPJ_G0034886.1 mouse_genomes_project 9 69653852 69664588 + MGP_LPJ_P0092724 protein_coding protein_coding MGP_LPJ_T0092725.1 MGP_LPJ_G0034886.1 mouse_genomes_project 9 69653854 69664226 + MGP_LPJ_P0092725 protein_coding protein_coding MGP_LPJ_T0092726.1 MGP_LPJ_G0034886.1 mouse_genomes_project 9 69653856 69664845 + MGP_LPJ_P0092726 protein_coding protein_coding MGP_LPJ_T0092727.1 MGP_LPJ_G0034886.1 mouse_genomes_project 9 69653876 69667064 + MGP_LPJ_P0092727 protein_coding nonsense_mediated_decay MGP_LPJ_T0092728.1 MGP_LPJ_G0034886.1 mouse_genomes_project 9 69654567 69664073 + protein_coding retained_intron MGP_LPJ_T0092729.1 MGP_LPJ_G0034886.1 mouse_genomes_project 9 69673593 69682562 + protein_coding processed_transcript MGP_LPJ_T0092730.1 MGP_LPJ_G0034886.1 mouse_genomes_project 9 69673751 69683881 + protein_coding retained_intron MGP_LPJ_T0002486.1 MGP_LPJ_G0002392.1 mouse_genomes_project 9 110685176 110687110 + TEC TEC MGP_LPJ_T0016066.1 MGP_LPJ_G0014157.1 mouse_genomes_project 9 91914707 91915304 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016020.1 MGP_LPJ_G0014111.1 mouse_genomes_project 9 72981810 72982625 - processed_pseudogene processed_pseudogene MGP_LPJ_T0093804.1 MGP_LPJ_G0035110.1 mouse_genomes_project 9 108176368 108197967 + MGP_LPJ_P0093804 Wdr82 protein_coding protein_coding MGP_LPJ_T0093805.1 MGP_LPJ_G0035110.1 mouse_genomes_project 9 108176369 108180994 + Wdr82 protein_coding retained_intron MGP_LPJ_T0093806.1 MGP_LPJ_G0035110.1 mouse_genomes_project 9 108183657 108193354 + MGP_LPJ_P0093806 Wdr82 protein_coding nonsense_mediated_decay MGP_LPJ_T0091412.1 MGP_LPJ_G0034432.1 mouse_genomes_project 9 33328034 33336198 + MGP_LPJ_P0091412 Rpusd4 protein_coding protein_coding MGP_LPJ_T0091413.1 MGP_LPJ_G0034432.1 mouse_genomes_project 9 33332444 33335443 + Rpusd4 protein_coding retained_intron MGP_LPJ_T0091414.1 MGP_LPJ_G0034432.1 mouse_genomes_project 9 33332798 33334018 + Rpusd4 protein_coding retained_intron MGP_LPJ_T0091415.1 MGP_LPJ_G0034432.1 mouse_genomes_project 9 33335429 33337885 + MGP_LPJ_P0091415 Rpusd4 protein_coding nonsense_mediated_decay MGP_LPJ_T0091862.1 MGP_LPJ_G0034633.1 mouse_genomes_project 9 44268516 44275747 + MGP_LPJ_P0091862 Fxyd2 protein_coding protein_coding MGP_LPJ_T0091863.1 MGP_LPJ_G0034633.1 mouse_genomes_project 9 44271571 44275730 + MGP_LPJ_P0091863 Fxyd2 protein_coding unknown_likely_coding MGP_LPJ_T0098341.1 MGP_LPJ_G0036622.1 mouse_genomes_project 9 114142536 114142654 - n-R5s90 rRNA rRNA MGP_LPJ_T0005571.1 MGP_LPJ_G0004700.1 mouse_genomes_project 9 111240185 111244139 - Gm7628 antisense antisense MGP_LPJ_T0090987.1 MGP_LPJ_G0034265.1 mouse_genomes_project 9 12600285 12641568 + MGP_LPJ_P0090987 Smco4 protein_coding protein_coding MGP_LPJ_T0090988.1 MGP_LPJ_G0034265.1 mouse_genomes_project 9 12617149 12641565 + MGP_LPJ_P0090988 Smco4 protein_coding protein_coding MGP_LPJ_T0002389.1 MGP_LPJ_G0002296.1 mouse_genomes_project 9 72246503 72249241 - TEC TEC MGP_LPJ_T0094263.1 MGP_LPJ_G0035184.1 mouse_genomes_project 9 110555396 110581650 - MGP_LPJ_P0094263 Ccdc36 protein_coding protein_coding MGP_LPJ_T0101081.1 MGP_LPJ_G0039344.1 mouse_genomes_project 9 12412899 12412975 - Gm24339 snoRNA snoRNA MGP_LPJ_T0009357.1 MGP_LPJ_G0007518.1 mouse_genomes_project 9 114798406 114800154 + 2900079G21Rik lincRNA lincRNA MGP_LPJ_T0009358.1 MGP_LPJ_G0007518.1 mouse_genomes_project 9 114798423 114852167 + 2900079G21Rik lincRNA lincRNA MGP_LPJ_T0009359.1 MGP_LPJ_G0007518.1 mouse_genomes_project 9 114798510 114800152 + 2900079G21Rik lincRNA lincRNA MGP_LPJ_T0009360.1 MGP_LPJ_G0007518.1 mouse_genomes_project 9 114827314 114919113 + 2900079G21Rik lincRNA lincRNA MGP_LPJ_T0091847.1 MGP_LPJ_G0034627.1 mouse_genomes_project 9 43981726 43997480 + MGP_LPJ_P0091847 Scn4b protein_coding protein_coding MGP_LPJ_T0002478.1 MGP_LPJ_G0002384.1 mouse_genomes_project 9 107689691 107690316 + TEC TEC MGP_LPJ_T0091136.1 MGP_LPJ_G0034342.1 mouse_genomes_project 9 18598280 18608103 - MGP_LPJ_P0091136 Keap1 protein_coding protein_coding MGP_LPJ_T0091137.1 MGP_LPJ_G0034342.1 mouse_genomes_project 9 18598281 18607842 - MGP_LPJ_P0091137 Keap1 protein_coding protein_coding MGP_LPJ_T0091138.1 MGP_LPJ_G0034342.1 mouse_genomes_project 9 18598617 18607584 - MGP_LPJ_P0091138 Keap1 protein_coding protein_coding MGP_LPJ_T0091139.1 MGP_LPJ_G0034342.1 mouse_genomes_project 9 18599183 18607850 - MGP_LPJ_P0091139 Keap1 protein_coding protein_coding MGP_LPJ_T0091140.1 MGP_LPJ_G0034342.1 mouse_genomes_project 9 18604691 18605964 - Keap1 protein_coding processed_transcript MGP_LPJ_T0011063.1 MGP_LPJ_G0009181.1 mouse_genomes_project 9 17338187 17338254 + Gm26231 miRNA miRNA MGP_LPJ_T0091950.1 MGP_LPJ_G0034657.1 mouse_genomes_project 9 47630513 47631133 + MGP_LPJ_P0091950 Gm5617 protein_coding protein_coding MGP_LPJ_T0091540.1 MGP_LPJ_G0034482.1 mouse_genomes_project 9 36299562 36300492 + MGP_LPJ_P0091540 Olfr887 protein_coding protein_coding MGP_LPJ_T0018481.1 MGP_LPJ_G0015656.1 mouse_genomes_project 9 56516759 56532270 - Gm10658 processed_transcript processed_transcript MGP_LPJ_T0018482.1 MGP_LPJ_G0015656.1 mouse_genomes_project 9 56517332 56532429 - Gm10658 processed_transcript processed_transcript MGP_LPJ_T0091236.1 MGP_LPJ_G0034381.1 mouse_genomes_project 9 19735349 19747709 - MGP_LPJ_P0091236 Zfp599 protein_coding protein_coding MGP_LPJ_T0090861.1 MGP_LPJ_G0034228.1 mouse_genomes_project 9 4733398 4753199 - MGP_LPJ_P0090861 Birc2 protein_coding protein_coding MGP_LPJ_T0090862.1 MGP_LPJ_G0034228.1 mouse_genomes_project 9 4733407 4750740 - MGP_LPJ_P0090862 Birc2 protein_coding protein_coding MGP_LPJ_T0090863.1 MGP_LPJ_G0034228.1 mouse_genomes_project 9 4750268 4752947 - Birc2 protein_coding processed_transcript MGP_LPJ_T0090864.1 MGP_LPJ_G0034228.1 mouse_genomes_project 9 4752828 4753206 - MGP_LPJ_P0090864 Birc2 protein_coding protein_coding MGP_LPJ_T0101117.1 MGP_LPJ_G0039380.1 mouse_genomes_project 9 77349109 77349229 - Gm22938 snoRNA snoRNA MGP_LPJ_T0090853.1 MGP_LPJ_G0034224.1 mouse_genomes_project 9 4484415 4498791 + MGP_LPJ_P0090853 Mmp27 protein_coding protein_coding MGP_LPJ_T0090854.1 MGP_LPJ_G0034224.1 mouse_genomes_project 9 4484477 4498786 + MGP_LPJ_P0090854 Mmp27 protein_coding protein_coding MGP_LPJ_T0090855.1 MGP_LPJ_G0034224.1 mouse_genomes_project 9 4484482 4499261 + MGP_LPJ_P0090855 Mmp27 protein_coding protein_coding MGP_LPJ_T0093603.1 MGP_LPJ_G0035073.1 mouse_genomes_project 9 103660915 104116363 - MGP_LPJ_P0093603 Ephb1 protein_coding protein_coding MGP_LPJ_T0093604.1 MGP_LPJ_G0035073.1 mouse_genomes_project 9 103661358 104116363 - MGP_LPJ_P0093604 Ephb1 protein_coding protein_coding MGP_LPJ_T0093606.1 MGP_LPJ_G0035073.1 mouse_genomes_project 9 103787598 104116363 - MGP_LPJ_P0093606 Ephb1 protein_coding protein_coding MGP_LPJ_T0091587.1 MGP_LPJ_G0034523.1 mouse_genomes_project 9 37457597 37493482 + MGP_LPJ_P0091587 Olfr943 protein_coding protein_coding MGP_LPJ_T0011089.1 MGP_LPJ_G0009207.1 mouse_genomes_project 9 61916843 61916920 - Mir5133 miRNA miRNA MGP_LPJ_T0005488.1 MGP_LPJ_G0004642.1 mouse_genomes_project 9 66668761 66680667 + Gm15563 antisense antisense MGP_LPJ_T0098077.1 MGP_LPJ_G0036358.1 mouse_genomes_project 9 69065251 69065685 + pseudogene pseudogene MGP_LPJ_T0093369.1 MGP_LPJ_G0035025.1 mouse_genomes_project 9 96016542 96589307 + MGP_LPJ_P0093369 Slc9a9 protein_coding protein_coding MGP_LPJ_T0093370.1 MGP_LPJ_G0035025.1 mouse_genomes_project 9 96016565 96068872 + Slc9a9 protein_coding processed_transcript MGP_LPJ_T0093371.1 MGP_LPJ_G0035025.1 mouse_genomes_project 9 96283524 96589314 + MGP_LPJ_P0093371 Slc9a9 protein_coding unknown_likely_coding MGP_LPJ_T0093372.1 MGP_LPJ_G0035025.1 mouse_genomes_project 9 96479770 96482628 + Slc9a9 protein_coding retained_intron MGP_LPJ_T0098342.1 MGP_LPJ_G0036623.1 mouse_genomes_project 9 118480857 118480976 - n-R5s92 rRNA rRNA MGP_LPJ_T0093233.1 MGP_LPJ_G0034994.1 mouse_genomes_project 9 88100990 88105355 + MGP_LPJ_P0093233 Ripply2 protein_coding protein_coding MGP_LPJ_T0093234.1 MGP_LPJ_G0034994.1 mouse_genomes_project 9 88101089 88105354 + MGP_LPJ_P0093234 Ripply2 protein_coding protein_coding MGP_LPJ_T0095031.1 MGP_LPJ_G0035348.1 mouse_genomes_project 9 125433023 125454793 + MGP_LPJ_P0095031 Snrk protein_coding protein_coding MGP_LPJ_T0095032.1 MGP_LPJ_G0035348.1 mouse_genomes_project 9 125433050 125454901 + MGP_LPJ_P0095032 Snrk protein_coding protein_coding MGP_LPJ_T0095033.1 MGP_LPJ_G0035348.1 mouse_genomes_project 9 125433079 125487916 + MGP_LPJ_P0095033 Snrk protein_coding protein_coding MGP_LPJ_T0095034.1 MGP_LPJ_G0035348.1 mouse_genomes_project 9 125433087 125485489 + MGP_LPJ_P0095034 Snrk protein_coding protein_coding MGP_LPJ_T0095035.1 MGP_LPJ_G0035348.1 mouse_genomes_project 9 125433099 125454748 + MGP_LPJ_P0095035 Snrk protein_coding protein_coding MGP_LPJ_T0095036.1 MGP_LPJ_G0035348.1 mouse_genomes_project 9 125433492 125454593 + Snrk protein_coding processed_transcript MGP_LPJ_T0095037.1 MGP_LPJ_G0035348.1 mouse_genomes_project 9 125479151 125485491 + Snrk protein_coding retained_intron MGP_LPJ_T0095038.1 MGP_LPJ_G0035348.1 mouse_genomes_project 9 125482968 125485590 + Snrk protein_coding retained_intron MGP_LPJ_T0016054.1 MGP_LPJ_G0014145.1 mouse_genomes_project 9 88208786 88212544 + processed_pseudogene processed_pseudogene MGP_LPJ_T0091774.1 MGP_LPJ_G0034607.1 mouse_genomes_project 9 43279138 43305879 + MGP_LPJ_P0091774 Bcl9l protein_coding unknown_likely_coding MGP_LPJ_T0002470.1 MGP_LPJ_G0002376.1 mouse_genomes_project 9 105278248 105278566 + TEC TEC MGP_LPJ_T0005464.1 MGP_LPJ_G0004629.1 mouse_genomes_project 9 49738425 49758619 - Plet1os antisense antisense MGP_LPJ_T0005465.1 MGP_LPJ_G0004629.1 mouse_genomes_project 9 49738429 49755599 - Plet1os antisense antisense MGP_LPJ_T0005551.1 MGP_LPJ_G0004685.1 mouse_genomes_project 9 108482012 108482750 - Gm28959 antisense antisense MGP_LPJ_T0091985.1 MGP_LPJ_G0034675.1 mouse_genomes_project 9 49829011 49837598 + MGP_LPJ_P0091985 Il18 protein_coding protein_coding MGP_LPJ_T0091986.1 MGP_LPJ_G0034675.1 mouse_genomes_project 9 49829011 49837598 + MGP_LPJ_P0091986 Il18 protein_coding protein_coding MGP_LPJ_T0091350.1 MGP_LPJ_G0034418.1 mouse_genomes_project 9 29330740 29369528 - MGP_LPJ_P0091350 Tmem45b protein_coding protein_coding MGP_LPJ_T0002493.1 MGP_LPJ_G0002399.1 mouse_genomes_project 9 112813253 112816634 - TEC TEC MGP_LPJ_T0009274.1 MGP_LPJ_G0007453.1 mouse_genomes_project 9 67942673 67944170 - M5C1000I18Rik lincRNA lincRNA MGP_LPJ_T0009275.1 MGP_LPJ_G0007453.1 mouse_genomes_project 9 67942674 67944192 - M5C1000I18Rik lincRNA lincRNA MGP_LPJ_T0009276.1 MGP_LPJ_G0007453.1 mouse_genomes_project 9 67942674 67944170 - M5C1000I18Rik lincRNA lincRNA MGP_LPJ_T0016125.1 MGP_LPJ_G0014216.1 mouse_genomes_project 9 123486327 123486917 + processed_pseudogene processed_pseudogene MGP_LPJ_T0091657.1 MGP_LPJ_G0034567.1 mouse_genomes_project 9 39421881 39487576 - MGP_LPJ_P0091657 Jhy protein_coding protein_coding MGP_LPJ_T0091658.1 MGP_LPJ_G0034567.1 mouse_genomes_project 9 39421883 39424651 - Jhy protein_coding retained_intron MGP_LPJ_T0091659.1 MGP_LPJ_G0034567.1 mouse_genomes_project 9 39484378 39485814 - MGP_LPJ_P0091659 Jhy protein_coding protein_coding MGP_LPJ_T0016099.1 MGP_LPJ_G0014190.1 mouse_genomes_project 9 103148702 103149065 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099855.1 MGP_LPJ_G0038118.1 mouse_genomes_project 9 93086294 93086399 + Gm26101 snRNA snRNA MGP_LPJ_T0091678.1 MGP_LPJ_G0034573.1 mouse_genomes_project 9 41035169 41096554 - MGP_LPJ_P0091678 Tbcel protein_coding protein_coding MGP_LPJ_T0091679.1 MGP_LPJ_G0034573.1 mouse_genomes_project 9 41035169 41081453 - MGP_LPJ_P0091679 Tbcel protein_coding protein_coding MGP_LPJ_T0091680.1 MGP_LPJ_G0034573.1 mouse_genomes_project 9 41036271 41085327 - MGP_LPJ_P0091680 Tbcel protein_coding protein_coding MGP_LPJ_T0091681.1 MGP_LPJ_G0034573.1 mouse_genomes_project 9 41036843 41051080 - Tbcel protein_coding processed_transcript MGP_LPJ_T0091682.1 MGP_LPJ_G0034573.1 mouse_genomes_project 9 41038528 41096561 - MGP_LPJ_P0091682 Tbcel protein_coding protein_coding MGP_LPJ_T0091683.1 MGP_LPJ_G0034573.1 mouse_genomes_project 9 41038642 41096514 - MGP_LPJ_P0091683 Tbcel protein_coding protein_coding MGP_LPJ_T0091684.1 MGP_LPJ_G0034573.1 mouse_genomes_project 9 41072748 41139296 - MGP_LPJ_P0091684 Tbcel protein_coding protein_coding MGP_LPJ_T0094813.1 MGP_LPJ_G0035278.1 mouse_genomes_project 9 117287516 117350234 - MGP_LPJ_P0094813 Trim71 protein_coding protein_coding MGP_LPJ_T0098327.1 MGP_LPJ_G0036608.1 mouse_genomes_project 9 33021674 33021804 + Gm23702 rRNA rRNA MGP_LPJ_T0093792.1 MGP_LPJ_G0035106.1 mouse_genomes_project 9 107645672 107798669 - MGP_LPJ_P0093792 Col6a6 protein_coding protein_coding MGP_LPJ_T0093793.1 MGP_LPJ_G0035106.1 mouse_genomes_project 9 107647292 107798594 - MGP_LPJ_P0093793 Col6a6 protein_coding protein_coding MGP_LPJ_T0093794.1 MGP_LPJ_G0035106.1 mouse_genomes_project 9 107738870 107780220 - MGP_LPJ_P0093794 Col6a6 protein_coding protein_coding MGP_LPJ_T0092624.1 MGP_LPJ_G0034865.1 mouse_genomes_project 9 65947530 66085994 + MGP_LPJ_P0092624 Csnk1g1 protein_coding protein_coding MGP_LPJ_T0092625.1 MGP_LPJ_G0034865.1 mouse_genomes_project 9 65947580 66044109 + Csnk1g1 protein_coding retained_intron MGP_LPJ_T0092626.1 MGP_LPJ_G0034865.1 mouse_genomes_project 9 65947583 66089102 + MGP_LPJ_P0092626 Csnk1g1 protein_coding protein_coding MGP_LPJ_T0092627.1 MGP_LPJ_G0034865.1 mouse_genomes_project 9 65947592 66089108 + MGP_LPJ_P0092627 Csnk1g1 protein_coding protein_coding MGP_LPJ_T0092628.1 MGP_LPJ_G0034865.1 mouse_genomes_project 9 65947626 65998278 + MGP_LPJ_P0092628 Csnk1g1 protein_coding protein_coding MGP_LPJ_T0092629.1 MGP_LPJ_G0034865.1 mouse_genomes_project 9 65947636 66016653 + Csnk1g1 protein_coding retained_intron MGP_LPJ_T0092630.1 MGP_LPJ_G0034865.1 mouse_genomes_project 9 65947694 66084526 + MGP_LPJ_P0092630 Csnk1g1 protein_coding protein_coding MGP_LPJ_T0092631.1 MGP_LPJ_G0034865.1 mouse_genomes_project 9 65948042 66087163 + MGP_LPJ_P0092631 Csnk1g1 protein_coding protein_coding MGP_LPJ_T0092632.1 MGP_LPJ_G0034865.1 mouse_genomes_project 9 65967667 66074963 + MGP_LPJ_P0092632 Csnk1g1 protein_coding protein_coding MGP_LPJ_T0092633.1 MGP_LPJ_G0034865.1 mouse_genomes_project 9 65997966 66089098 + MGP_LPJ_P0092633 Csnk1g1 protein_coding protein_coding MGP_LPJ_T0092634.1 MGP_LPJ_G0034865.1 mouse_genomes_project 9 66048859 66076440 + MGP_LPJ_P0092634 Csnk1g1 protein_coding nonsense_mediated_decay MGP_LPJ_T0092635.1 MGP_LPJ_G0034865.1 mouse_genomes_project 9 66051170 66054801 + Csnk1g1 protein_coding retained_intron MGP_LPJ_T0092636.1 MGP_LPJ_G0034865.1 mouse_genomes_project 9 66051194 66083815 + MGP_LPJ_P0092636 Csnk1g1 protein_coding protein_coding MGP_LPJ_T0092637.1 MGP_LPJ_G0034865.1 mouse_genomes_project 9 66051537 66074963 + MGP_LPJ_P0092637 Csnk1g1 protein_coding protein_coding MGP_LPJ_T0092638.1 MGP_LPJ_G0034865.1 mouse_genomes_project 9 66080104 66083833 + Csnk1g1 protein_coding retained_intron MGP_LPJ_T0094933.1 MGP_LPJ_G0035316.1 mouse_genomes_project 9 123082629 123112706 + MGP_LPJ_P0094933 Ttc21a protein_coding protein_coding MGP_LPJ_T0094934.1 MGP_LPJ_G0035316.1 mouse_genomes_project 9 123082658 123111966 + Ttc21a protein_coding retained_intron MGP_LPJ_T0094935.1 MGP_LPJ_G0035316.1 mouse_genomes_project 9 123082659 123107575 + Ttc21a protein_coding retained_intron MGP_LPJ_T0094936.1 MGP_LPJ_G0035316.1 mouse_genomes_project 9 123106516 123111082 + Ttc21a protein_coding retained_intron MGP_LPJ_T0093434.1 MGP_LPJ_G0035036.1 mouse_genomes_project 9 97785330 97821043 - MGP_LPJ_P0093434 Atp1b3 protein_coding protein_coding MGP_LPJ_T0093435.1 MGP_LPJ_G0035036.1 mouse_genomes_project 9 97795327 97800226 - Atp1b3 protein_coding retained_intron MGP_LPJ_T0093436.1 MGP_LPJ_G0035036.1 mouse_genomes_project 9 97802573 97806155 - Atp1b3 protein_coding processed_transcript MGP_LPJ_T0005439.1 MGP_LPJ_G0004611.1 mouse_genomes_project 9 17936057 17946156 + Fbxl12os antisense antisense MGP_LPJ_T0005440.1 MGP_LPJ_G0004611.1 mouse_genomes_project 9 17936244 17943561 + Fbxl12os antisense antisense MGP_LPJ_T0005441.1 MGP_LPJ_G0004611.1 mouse_genomes_project 9 17936392 17943566 + Fbxl12os antisense antisense MGP_LPJ_T0005442.1 MGP_LPJ_G0004611.1 mouse_genomes_project 9 17943297 17944463 + Fbxl12os antisense antisense MGP_LPJ_T0094179.1 MGP_LPJ_G0035169.1 mouse_genomes_project 9 110113258 110164409 + MGP_LPJ_P0094179 Ip6k1 protein_coding protein_coding MGP_LPJ_T0094180.1 MGP_LPJ_G0035169.1 mouse_genomes_project 9 110113386 110160505 + MGP_LPJ_P0094180 Ip6k1 protein_coding nonsense_mediated_decay MGP_LPJ_T0094181.1 MGP_LPJ_G0035169.1 mouse_genomes_project 9 110113391 110161346 + Ip6k1 protein_coding processed_transcript MGP_LPJ_T0094182.1 MGP_LPJ_G0035169.1 mouse_genomes_project 9 110113400 110161744 + Ip6k1 protein_coding retained_intron MGP_LPJ_T0094183.1 MGP_LPJ_G0035169.1 mouse_genomes_project 9 110113403 110146415 + MGP_LPJ_P0094183 Ip6k1 protein_coding protein_coding MGP_LPJ_T0094184.1 MGP_LPJ_G0035169.1 mouse_genomes_project 9 110113428 110155343 + MGP_LPJ_P0094184 Ip6k1 protein_coding protein_coding MGP_LPJ_T0094185.1 MGP_LPJ_G0035169.1 mouse_genomes_project 9 110137166 110161242 + MGP_LPJ_P0094185 Ip6k1 protein_coding nonsense_mediated_decay MGP_LPJ_T0094186.1 MGP_LPJ_G0035169.1 mouse_genomes_project 9 110137198 110144793 + Ip6k1 protein_coding processed_transcript MGP_LPJ_T0094187.1 MGP_LPJ_G0035169.1 mouse_genomes_project 9 110144761 110161778 + MGP_LPJ_P0094187 Ip6k1 protein_coding protein_coding MGP_LPJ_T0094188.1 MGP_LPJ_G0035169.1 mouse_genomes_project 9 110160520 110161174 + MGP_LPJ_P0094188 Ip6k1 protein_coding protein_coding MGP_LPJ_T0091121.1 MGP_LPJ_G0034333.1 mouse_genomes_project 9 18369562 18383544 + MGP_LPJ_P0091121 Icam1 protein_coding protein_coding MGP_LPJ_T0093120.1 MGP_LPJ_G0034975.1 mouse_genomes_project 9 82683862 83035747 + MGP_LPJ_P0093120 Mei4 protein_coding protein_coding MGP_LPJ_T0093121.1 MGP_LPJ_G0034975.1 mouse_genomes_project 9 82711688 82846254 + MGP_LPJ_P0093121 Mei4 protein_coding protein_coding MGP_LPJ_T0092761.1 MGP_LPJ_G0034891.1 mouse_genomes_project 9 70313909 70320329 - MGP_LPJ_P0092761 Gcnt3 protein_coding protein_coding MGP_LPJ_T0093807.1 MGP_LPJ_G0035111.1 mouse_genomes_project 9 108200944 108206098 - MGP_LPJ_P0093807 Ppm1m protein_coding protein_coding MGP_LPJ_T0093808.1 MGP_LPJ_G0035111.1 mouse_genomes_project 9 108200944 108205744 - MGP_LPJ_P0093808 Ppm1m protein_coding protein_coding MGP_LPJ_T0093809.1 MGP_LPJ_G0035111.1 mouse_genomes_project 9 108201719 108203670 - MGP_LPJ_P0093809 Ppm1m protein_coding protein_coding MGP_LPJ_T0093810.1 MGP_LPJ_G0035111.1 mouse_genomes_project 9 108204316 108205140 - Ppm1m protein_coding retained_intron MGP_LPJ_T0093811.1 MGP_LPJ_G0035111.1 mouse_genomes_project 9 108204726 108206565 - Ppm1m protein_coding processed_transcript MGP_LPJ_T0011760.1 MGP_LPJ_G0009878.1 mouse_genomes_project 9 108667421 108667681 + Gm26185 misc_RNA misc_RNA MGP_LPJ_T0091608.1 MGP_LPJ_G0034538.1 mouse_genomes_project 9 38105195 38106225 - MGP_LPJ_P0091608 Olfr149 protein_coding protein_coding MGP_LPJ_T0094189.1 MGP_LPJ_G0035170.1 mouse_genomes_project 9 110166169 110166482 + Gmppb protein_coding processed_transcript MGP_LPJ_T0094190.1 MGP_LPJ_G0035170.1 mouse_genomes_project 9 110166189 110168810 + Gmppb protein_coding retained_intron MGP_LPJ_T0094191.1 MGP_LPJ_G0035170.1 mouse_genomes_project 9 110166207 110168357 + MGP_LPJ_P0094191 Gmppb protein_coding unknown_likely_coding MGP_LPJ_T0094192.1 MGP_LPJ_G0035170.1 mouse_genomes_project 9 110166355 110168419 + Gmppb protein_coding retained_intron MGP_LPJ_T0092583.1 MGP_LPJ_G0034850.1 mouse_genomes_project 9 65347039 65360104 + MGP_LPJ_P0092583 Pdcd7 protein_coding protein_coding MGP_LPJ_T0009295.1 MGP_LPJ_G0007470.1 mouse_genomes_project 9 80925085 80928888 - Gm17477 lincRNA lincRNA MGP_LPJ_T0092577.1 MGP_LPJ_G0034848.1 mouse_genomes_project 9 65266364 65281782 + MGP_LPJ_P0092577 protein_coding protein_coding MGP_LPJ_T0092578.1 MGP_LPJ_G0034848.1 mouse_genomes_project 9 65267008 65281712 + MGP_LPJ_P0092578 protein_coding nonsense_mediated_decay MGP_LPJ_T0011755.1 MGP_LPJ_G0009873.1 mouse_genomes_project 9 80840201 80840487 + Gm25433 misc_RNA misc_RNA MGP_LPJ_T0005502.1 MGP_LPJ_G0004652.1 mouse_genomes_project 9 76486303 76605197 - Gm26903 antisense antisense MGP_LPJ_T0091771.1 MGP_LPJ_G0034604.1 mouse_genomes_project 9 43199960 43209197 - MGP_LPJ_P0091771 Ccdc84 protein_coding protein_coding MGP_LPJ_T0091430.1 MGP_LPJ_G0034438.1 mouse_genomes_project 9 33670827 33675504 - MGP_LPJ_P0091430 Pate4 protein_coding protein_coding MGP_LPJ_T0092235.1 MGP_LPJ_G0034755.1 mouse_genomes_project 9 56593357 56596768 + MGP_LPJ_P0092235 Man2c1 protein_coding nonsense_mediated_decay MGP_LPJ_T0092236.1 MGP_LPJ_G0034755.1 mouse_genomes_project 9 56593357 56605343 + MGP_LPJ_P0092236 Man2c1 protein_coding protein_coding MGP_LPJ_T0092237.1 MGP_LPJ_G0034755.1 mouse_genomes_project 9 56593435 56603331 + MGP_LPJ_P0092237 Man2c1 protein_coding protein_coding MGP_LPJ_T0092238.1 MGP_LPJ_G0034755.1 mouse_genomes_project 9 56593435 56599409 + MGP_LPJ_P0092238 Man2c1 protein_coding nonsense_mediated_decay MGP_LPJ_T0092239.1 MGP_LPJ_G0034755.1 mouse_genomes_project 9 56593437 56597744 + Man2c1 protein_coding retained_intron MGP_LPJ_T0092240.1 MGP_LPJ_G0034755.1 mouse_genomes_project 9 56593437 56604824 + MGP_LPJ_P0092240 Man2c1 protein_coding protein_coding MGP_LPJ_T0092241.1 MGP_LPJ_G0034755.1 mouse_genomes_project 9 56593444 56593921 + Man2c1 protein_coding processed_transcript MGP_LPJ_T0092242.1 MGP_LPJ_G0034755.1 mouse_genomes_project 9 56593453 56604825 + MGP_LPJ_P0092242 Man2c1 protein_coding protein_coding MGP_LPJ_T0092243.1 MGP_LPJ_G0034755.1 mouse_genomes_project 9 56593453 56602018 + MGP_LPJ_P0092243 Man2c1 protein_coding nonsense_mediated_decay MGP_LPJ_T0092244.1 MGP_LPJ_G0034755.1 mouse_genomes_project 9 56593453 56600423 + MGP_LPJ_P0092244 Man2c1 protein_coding nonsense_mediated_decay MGP_LPJ_T0092245.1 MGP_LPJ_G0034755.1 mouse_genomes_project 9 56594041 56597718 + Man2c1 protein_coding retained_intron MGP_LPJ_T0092246.1 MGP_LPJ_G0034755.1 mouse_genomes_project 9 56597555 56600143 + Man2c1 protein_coding retained_intron MGP_LPJ_T0092247.1 MGP_LPJ_G0034755.1 mouse_genomes_project 9 56598204 56599616 + MGP_LPJ_P0092247 Man2c1 protein_coding nonsense_mediated_decay MGP_LPJ_T0092248.1 MGP_LPJ_G0034755.1 mouse_genomes_project 9 56599357 56600457 + Man2c1 protein_coding retained_intron MGP_LPJ_T0092249.1 MGP_LPJ_G0034755.1 mouse_genomes_project 9 56600662 56603349 + MGP_LPJ_P0092249 Man2c1 protein_coding nonsense_mediated_decay MGP_LPJ_T0092250.1 MGP_LPJ_G0034755.1 mouse_genomes_project 9 56601045 56603032 + MGP_LPJ_P0092250 Man2c1 protein_coding nonsense_mediated_decay MGP_LPJ_T0092251.1 MGP_LPJ_G0034755.1 mouse_genomes_project 9 56601487 56602614 + Man2c1 protein_coding retained_intron MGP_LPJ_T0092252.1 MGP_LPJ_G0034755.1 mouse_genomes_project 9 56602119 56604834 + Man2c1 protein_coding retained_intron MGP_LPJ_T0092253.1 MGP_LPJ_G0034755.1 mouse_genomes_project 9 56602119 56603333 + Man2c1 protein_coding retained_intron MGP_LPJ_T0092254.1 MGP_LPJ_G0034755.1 mouse_genomes_project 9 56602497 56603800 + Man2c1 protein_coding retained_intron MGP_LPJ_T0092255.1 MGP_LPJ_G0034755.1 mouse_genomes_project 9 56602898 56604828 + Man2c1 protein_coding retained_intron MGP_LPJ_T0092256.1 MGP_LPJ_G0034755.1 mouse_genomes_project 9 56603303 56604834 + Man2c1 protein_coding retained_intron MGP_LPJ_T0092257.1 MGP_LPJ_G0034755.1 mouse_genomes_project 9 56603998 56604828 + Man2c1 protein_coding retained_intron MGP_LPJ_T0092890.1 MGP_LPJ_G0034916.1 mouse_genomes_project 9 73387824 73441890 + MGP_LPJ_P0092890 Gm44503 protein_coding nonsense_mediated_decay MGP_LPJ_T0092798.1 MGP_LPJ_G0034905.1 mouse_genomes_project 9 71836269 71928806 - Myzap protein_coding retained_intron MGP_LPJ_T0092799.1 MGP_LPJ_G0034905.1 mouse_genomes_project 9 71836269 71928806 - MGP_LPJ_P0092799 Myzap protein_coding protein_coding MGP_LPJ_T0092800.1 MGP_LPJ_G0034905.1 mouse_genomes_project 9 71836981 71928711 - MGP_LPJ_P0092800 Myzap protein_coding protein_coding MGP_LPJ_T0092801.1 MGP_LPJ_G0034905.1 mouse_genomes_project 9 71894765 71916351 - MGP_LPJ_P0092801 Myzap protein_coding protein_coding MGP_LPJ_T0092802.1 MGP_LPJ_G0034905.1 mouse_genomes_project 9 71898361 71928788 - MGP_LPJ_P0092802 Myzap protein_coding protein_coding MGP_LPJ_T0094284.1 MGP_LPJ_G0035188.1 mouse_genomes_project 9 110633055 110633701 + MGP_LPJ_P0094284 Lamb2 protein_coding protein_coding MGP_LPJ_T0094285.1 MGP_LPJ_G0035188.1 mouse_genomes_project 9 110633176 110643951 + MGP_LPJ_P0094285 Lamb2 protein_coding protein_coding MGP_LPJ_T0094286.1 MGP_LPJ_G0035188.1 mouse_genomes_project 9 110633191 110633973 + MGP_LPJ_P0094286 Lamb2 protein_coding protein_coding MGP_LPJ_T0094287.1 MGP_LPJ_G0035188.1 mouse_genomes_project 9 110633197 110633906 + MGP_LPJ_P0094287 Lamb2 protein_coding protein_coding MGP_LPJ_T0094288.1 MGP_LPJ_G0035188.1 mouse_genomes_project 9 110633200 110633504 + Lamb2 protein_coding retained_intron MGP_LPJ_T0094289.1 MGP_LPJ_G0035188.1 mouse_genomes_project 9 110641238 110642092 + Lamb2 protein_coding retained_intron MGP_LPJ_T0094290.1 MGP_LPJ_G0035188.1 mouse_genomes_project 9 110642297 110642953 + Lamb2 protein_coding retained_intron MGP_LPJ_T0095017.1 MGP_LPJ_G0035340.1 mouse_genomes_project 9 125082514 125091009 - MGP_LPJ_P0095017 Hhatl protein_coding protein_coding MGP_LPJ_T0095018.1 MGP_LPJ_G0035340.1 mouse_genomes_project 9 125082520 125089532 - MGP_LPJ_P0095018 Hhatl protein_coding protein_coding MGP_LPJ_T0094365.1 MGP_LPJ_G0035197.1 mouse_genomes_project 9 110765715 110794753 - MGP_LPJ_P0094365 Arih2 protein_coding unknown_likely_coding MGP_LPJ_T0094366.1 MGP_LPJ_G0035197.1 mouse_genomes_project 9 110765718 110820998 - MGP_LPJ_P0094366 Arih2 protein_coding protein_coding MGP_LPJ_T0094367.1 MGP_LPJ_G0035197.1 mouse_genomes_project 9 110765723 110769370 - Arih2 protein_coding retained_intron MGP_LPJ_T0094368.1 MGP_LPJ_G0035197.1 mouse_genomes_project 9 110767462 110821003 - MGP_LPJ_P0094368 Arih2 protein_coding nonsense_mediated_decay MGP_LPJ_T0094369.1 MGP_LPJ_G0035197.1 mouse_genomes_project 9 110767584 110771440 - MGP_LPJ_P0094369 Arih2 protein_coding nonsense_mediated_decay MGP_LPJ_T0094370.1 MGP_LPJ_G0035197.1 mouse_genomes_project 9 110767719 110770115 - Arih2 protein_coding retained_intron MGP_LPJ_T0094371.1 MGP_LPJ_G0035197.1 mouse_genomes_project 9 110768050 110770718 - Arih2 protein_coding retained_intron MGP_LPJ_T0094372.1 MGP_LPJ_G0035197.1 mouse_genomes_project 9 110772652 110821004 - MGP_LPJ_P0094372 Arih2 protein_coding protein_coding MGP_LPJ_T0094373.1 MGP_LPJ_G0035197.1 mouse_genomes_project 9 110772736 110812671 - MGP_LPJ_P0094373 Arih2 protein_coding nonsense_mediated_decay MGP_LPJ_T0094374.1 MGP_LPJ_G0035197.1 mouse_genomes_project 9 110777524 110795570 - Arih2 protein_coding retained_intron MGP_LPJ_T0094375.1 MGP_LPJ_G0035197.1 mouse_genomes_project 9 110778524 110820936 - Arih2 protein_coding retained_intron MGP_LPJ_T0094376.1 MGP_LPJ_G0035197.1 mouse_genomes_project 9 110779541 110820960 - MGP_LPJ_P0094376 Arih2 protein_coding nonsense_mediated_decay MGP_LPJ_T0094377.1 MGP_LPJ_G0035197.1 mouse_genomes_project 9 110813131 110820987 - Arih2 protein_coding retained_intron MGP_LPJ_T0093293.1 MGP_LPJ_G0035010.1 mouse_genomes_project 9 90871609 90884828 - MGP_LPJ_P0093293 Ankrd34c protein_coding protein_coding MGP_LPJ_T0093294.1 MGP_LPJ_G0035010.1 mouse_genomes_project 9 90874841 90884798 - MGP_LPJ_P0093294 Ankrd34c protein_coding protein_coding MGP_LPJ_T0099836.1 MGP_LPJ_G0038099.1 mouse_genomes_project 9 67262201 67262349 + Gm22145 snRNA snRNA MGP_LPJ_T0015972.1 MGP_LPJ_G0014063.1 mouse_genomes_project 9 11472452 11491317 - processed_pseudogene processed_pseudogene MGP_LPJ_T0094787.1 MGP_LPJ_G0035267.1 mouse_genomes_project 9 116311031 116370615 - MGP_LPJ_P0094787 Pdcd6ip protein_coding protein_coding MGP_LPJ_T0094788.1 MGP_LPJ_G0035267.1 mouse_genomes_project 9 116313759 116370600 - MGP_LPJ_P0094788 Pdcd6ip protein_coding protein_coding MGP_LPJ_T0094789.1 MGP_LPJ_G0035267.1 mouse_genomes_project 9 116315499 116317224 - Pdcd6ip protein_coding retained_intron MGP_LPJ_T0094790.1 MGP_LPJ_G0035267.1 mouse_genomes_project 9 116319564 116322344 - Pdcd6ip protein_coding retained_intron MGP_LPJ_T0094791.1 MGP_LPJ_G0035267.1 mouse_genomes_project 9 116335568 116346549 - Pdcd6ip protein_coding processed_transcript MGP_LPJ_T0094792.1 MGP_LPJ_G0035267.1 mouse_genomes_project 9 116348646 116358659 - Pdcd6ip protein_coding retained_intron MGP_LPJ_T0099830.1 MGP_LPJ_G0038093.1 mouse_genomes_project 9 63322746 63322888 + Gm25995 snRNA snRNA MGP_LPJ_T0009338.1 MGP_LPJ_G0007504.1 mouse_genomes_project 9 105765670 105810287 - Gm29154 lincRNA lincRNA MGP_LPJ_T0009339.1 MGP_LPJ_G0007504.1 mouse_genomes_project 9 105765773 105809579 - Gm29154 lincRNA lincRNA MGP_LPJ_T0092035.1 MGP_LPJ_G0034687.1 mouse_genomes_project 9 50036241 50110971 + MGP_LPJ_P0092035 Alg9 protein_coding protein_coding MGP_LPJ_T0092036.1 MGP_LPJ_G0034687.1 mouse_genomes_project 9 50036527 50110985 + MGP_LPJ_P0092036 Alg9 protein_coding nonsense_mediated_decay MGP_LPJ_T0092037.1 MGP_LPJ_G0034687.1 mouse_genomes_project 9 50036589 50051051 + MGP_LPJ_P0092037 Alg9 protein_coding protein_coding MGP_LPJ_T0092038.1 MGP_LPJ_G0034687.1 mouse_genomes_project 9 50036768 50044588 + Alg9 protein_coding processed_transcript MGP_LPJ_T0092039.1 MGP_LPJ_G0034687.1 mouse_genomes_project 9 50037338 50040317 + Alg9 protein_coding processed_transcript MGP_LPJ_T0092040.1 MGP_LPJ_G0034687.1 mouse_genomes_project 9 50065858 50110207 + MGP_LPJ_P0092040 Alg9 protein_coding nonsense_mediated_decay MGP_LPJ_T0092041.1 MGP_LPJ_G0034687.1 mouse_genomes_project 9 50072464 50110805 + MGP_LPJ_P0092041 Alg9 protein_coding protein_coding MGP_LPJ_T0092042.1 MGP_LPJ_G0034687.1 mouse_genomes_project 9 50088011 50110415 + Alg9 protein_coding processed_transcript MGP_LPJ_T0092043.1 MGP_LPJ_G0034687.1 mouse_genomes_project 9 50103030 50110534 + Alg9 protein_coding processed_transcript MGP_LPJ_T0009366.1 MGP_LPJ_G0007524.1 mouse_genomes_project 9 122557635 122562188 - 4930516B21Rik lincRNA lincRNA MGP_LPJ_T0091299.1 MGP_LPJ_G0034405.1 mouse_genomes_project 9 24758151 24820468 - MGP_LPJ_P0091299 Jam3 protein_coding protein_coding MGP_LPJ_T0091300.1 MGP_LPJ_G0034405.1 mouse_genomes_project 9 24761434 24820465 - MGP_LPJ_P0091300 Jam3 protein_coding protein_coding MGP_LPJ_T0090902.1 MGP_LPJ_G0034241.1 mouse_genomes_project 9 10347226 10677533 + MGP_LPJ_P0090902 protein_coding protein_coding MGP_LPJ_T0090904.1 MGP_LPJ_G0034241.1 mouse_genomes_project 9 10590372 10680316 + MGP_LPJ_P0090904 protein_coding protein_coding MGP_LPJ_T0090905.1 MGP_LPJ_G0034241.1 mouse_genomes_project 9 10592028 10678271 + MGP_LPJ_P0090905 protein_coding protein_coding MGP_LPJ_T0090906.1 MGP_LPJ_G0034241.1 mouse_genomes_project 9 10632845 10678273 + protein_coding processed_transcript MGP_LPJ_T0091212.1 MGP_LPJ_G0034369.1 mouse_genomes_project 9 19395045 19413969 - MGP_LPJ_P0091212 Rgl3 protein_coding protein_coding MGP_LPJ_T0093662.1 MGP_LPJ_G0035086.1 mouse_genomes_project 9 105070027 105110525 - MGP_LPJ_P0093662 1300017J02Rik protein_coding protein_coding MGP_LPJ_T0093663.1 MGP_LPJ_G0035086.1 mouse_genomes_project 9 105070028 105079196 - 1300017J02Rik protein_coding retained_intron MGP_LPJ_T0093664.1 MGP_LPJ_G0035086.1 mouse_genomes_project 9 105070131 105110452 - MGP_LPJ_P0093664 1300017J02Rik protein_coding protein_coding MGP_LPJ_T0093665.1 MGP_LPJ_G0035086.1 mouse_genomes_project 9 105071349 105088580 - MGP_LPJ_P0093665 1300017J02Rik protein_coding protein_coding MGP_LPJ_T0093666.1 MGP_LPJ_G0035086.1 mouse_genomes_project 9 105093069 105110525 - 1300017J02Rik protein_coding processed_transcript MGP_LPJ_T0093667.1 MGP_LPJ_G0035086.1 mouse_genomes_project 9 105105220 105124495 - MGP_LPJ_P0093667 1300017J02Rik protein_coding protein_coding MGP_LPJ_T0015987.1 MGP_LPJ_G0014078.1 mouse_genomes_project 9 32228300 32228862 + processed_pseudogene processed_pseudogene MGP_LPJ_T0094157.1 MGP_LPJ_G0035165.1 mouse_genomes_project 9 110093503 110105753 + Gm20661 protein_coding retained_intron MGP_LPJ_T0094158.1 MGP_LPJ_G0035165.1 mouse_genomes_project 9 110093538 110104788 + Gm20661 protein_coding retained_intron MGP_LPJ_T0094159.1 MGP_LPJ_G0035165.1 mouse_genomes_project 9 110093732 110105308 + MGP_LPJ_P0094159 Gm20661 protein_coding nonsense_mediated_decay MGP_LPJ_T0093636.1 MGP_LPJ_G0035079.1 mouse_genomes_project 9 104524199 104543312 + MGP_LPJ_P0093636 Gm5627 protein_coding protein_coding MGP_LPJ_T0094497.1 MGP_LPJ_G0035217.1 mouse_genomes_project 9 111348292 111365030 - MGP_LPJ_P0094497 Fbxw13 protein_coding protein_coding MGP_LPJ_T0094498.1 MGP_LPJ_G0035217.1 mouse_genomes_project 9 111348313 111365017 - MGP_LPJ_P0094498 Fbxw13 protein_coding nonsense_mediated_decay MGP_LPJ_T0094499.1 MGP_LPJ_G0035217.1 mouse_genomes_project 9 111350589 111364575 - MGP_LPJ_P0094499 Fbxw13 protein_coding protein_coding MGP_LPJ_T0093637.1 MGP_LPJ_G0035080.1 mouse_genomes_project 9 104629926 104706114 + MGP_LPJ_P0093637 Ryk protein_coding protein_coding MGP_LPJ_T0093638.1 MGP_LPJ_G0035080.1 mouse_genomes_project 9 104629981 104706525 + MGP_LPJ_P0093638 Ryk protein_coding protein_coding MGP_LPJ_T0093639.1 MGP_LPJ_G0035080.1 mouse_genomes_project 9 104629991 104706877 + MGP_LPJ_P0093639 Ryk protein_coding nonsense_mediated_decay MGP_LPJ_T0093640.1 MGP_LPJ_G0035080.1 mouse_genomes_project 9 104641179 104656605 + Ryk protein_coding processed_transcript MGP_LPJ_T0093641.1 MGP_LPJ_G0035080.1 mouse_genomes_project 9 104665351 104679474 + Ryk protein_coding retained_intron MGP_LPJ_T0093642.1 MGP_LPJ_G0035080.1 mouse_genomes_project 9 104697176 104698167 + Ryk protein_coding retained_intron MGP_LPJ_T0090886.1 MGP_LPJ_G0034235.1 mouse_genomes_project 9 5785690 5856397 + MGP_LPJ_P0090886 Pgr protein_coding protein_coding MGP_LPJ_T0090887.1 MGP_LPJ_G0034235.1 mouse_genomes_project 9 5786276 5834370 + Pgr protein_coding retained_intron MGP_LPJ_T0090888.1 MGP_LPJ_G0034235.1 mouse_genomes_project 9 5786325 5852075 + MGP_LPJ_P0090888 Pgr protein_coding protein_coding MGP_LPJ_T0094931.1 MGP_LPJ_G0035314.1 mouse_genomes_project 9 123039937 123071588 + MGP_LPJ_P0094931 Wdr48 protein_coding protein_coding MGP_LPJ_T0091861.1 MGP_LPJ_G0034632.1 mouse_genomes_project 9 44232633 44261557 + MGP_LPJ_P0091861 Fxyd6 protein_coding protein_coding MGP_LPJ_T0005579.1 MGP_LPJ_G0004708.1 mouse_genomes_project 9 117998209 118003838 - Gm4665 antisense antisense MGP_LPJ_T0093482.1 MGP_LPJ_G0035043.1 mouse_genomes_project 9 98866564 98893710 - MGP_LPJ_P0093482 Trim42 protein_coding protein_coding MGP_LPJ_T0002481.1 MGP_LPJ_G0002387.1 mouse_genomes_project 9 109767661 109768860 + TEC TEC MGP_LPJ_T0091340.1 MGP_LPJ_G0034417.1 mouse_genomes_project 9 29284851 29324054 + MGP_LPJ_P0091340 Nfrkb protein_coding protein_coding MGP_LPJ_T0091341.1 MGP_LPJ_G0034417.1 mouse_genomes_project 9 29284856 29324054 + MGP_LPJ_P0091341 Nfrkb protein_coding nonsense_mediated_decay MGP_LPJ_T0091342.1 MGP_LPJ_G0034417.1 mouse_genomes_project 9 29284863 29294979 + MGP_LPJ_P0091342 Nfrkb protein_coding nonsense_mediated_decay MGP_LPJ_T0091343.1 MGP_LPJ_G0034417.1 mouse_genomes_project 9 29284872 29324054 + MGP_LPJ_P0091343 Nfrkb protein_coding nonsense_mediated_decay MGP_LPJ_T0091344.1 MGP_LPJ_G0034417.1 mouse_genomes_project 9 29284887 29322901 + MGP_LPJ_P0091344 Nfrkb protein_coding unknown_likely_coding MGP_LPJ_T0091345.1 MGP_LPJ_G0034417.1 mouse_genomes_project 9 29284887 29322901 + MGP_LPJ_P0091345 Nfrkb protein_coding unknown_likely_coding MGP_LPJ_T0091346.1 MGP_LPJ_G0034417.1 mouse_genomes_project 9 29293021 29299432 + Nfrkb protein_coding retained_intron MGP_LPJ_T0091347.1 MGP_LPJ_G0034417.1 mouse_genomes_project 9 29297465 29299404 + Nfrkb protein_coding retained_intron MGP_LPJ_T0091348.1 MGP_LPJ_G0034417.1 mouse_genomes_project 9 29299452 29324054 + Nfrkb protein_coding retained_intron MGP_LPJ_T0091349.1 MGP_LPJ_G0034417.1 mouse_genomes_project 9 29308175 29309221 + Nfrkb protein_coding retained_intron MGP_LPJ_T0093417.1 MGP_LPJ_G0035034.1 mouse_genomes_project 9 97556920 97626093 + MGP_LPJ_P0093417 Gk5 protein_coding protein_coding MGP_LPJ_T0093418.1 MGP_LPJ_G0035034.1 mouse_genomes_project 9 97556933 97630511 + MGP_LPJ_P0093418 Gk5 protein_coding protein_coding MGP_LPJ_T0093419.1 MGP_LPJ_G0035034.1 mouse_genomes_project 9 97556990 97628713 + MGP_LPJ_P0093419 Gk5 protein_coding nonsense_mediated_decay MGP_LPJ_T0093420.1 MGP_LPJ_G0035034.1 mouse_genomes_project 9 97561875 97578849 + Gk5 protein_coding processed_transcript MGP_LPJ_T0093421.1 MGP_LPJ_G0035034.1 mouse_genomes_project 9 97616754 97619361 + Gk5 protein_coding retained_intron MGP_LPJ_T0094247.1 MGP_LPJ_G0035181.1 mouse_genomes_project 9 110486951 110487851 + Gpx1 protein_coding retained_intron MGP_LPJ_T0094248.1 MGP_LPJ_G0035181.1 mouse_genomes_project 9 110487102 110488392 + MGP_LPJ_P0094248 Gpx1 protein_coding protein_coding MGP_LPJ_T0094249.1 MGP_LPJ_G0035181.1 mouse_genomes_project 9 110487291 110488299 + MGP_LPJ_P0094249 Gpx1 protein_coding protein_coding MGP_LPJ_T0094250.1 MGP_LPJ_G0035181.1 mouse_genomes_project 9 110487324 110488299 + MGP_LPJ_P0094250 Gpx1 protein_coding protein_coding MGP_LPJ_T0002450.1 MGP_LPJ_G0002356.1 mouse_genomes_project 9 100920920 100923789 + TEC TEC MGP_LPJ_T0091304.1 MGP_LPJ_G0034407.1 mouse_genomes_project 9 25076784 25081670 + MGP_LPJ_P0091304 Spata19 protein_coding protein_coding MGP_LPJ_T0094751.1 MGP_LPJ_G0035264.1 mouse_genomes_project 9 114083752 114226094 - MGP_LPJ_P0094751 Stac protein_coding protein_coding MGP_LPJ_T0094752.1 MGP_LPJ_G0035264.1 mouse_genomes_project 9 114083752 114225971 - MGP_LPJ_P0094752 Stac protein_coding nonsense_mediated_decay MGP_LPJ_T0094753.1 MGP_LPJ_G0035264.1 mouse_genomes_project 9 114163452 114226075 - Stac protein_coding processed_transcript MGP_LPJ_T0094636.1 MGP_LPJ_G0035240.1 mouse_genomes_project 9 113079727 113083045 - MGP_LPJ_P0094636 Nradd protein_coding protein_coding MGP_LPJ_T0094637.1 MGP_LPJ_G0035240.1 mouse_genomes_project 9 113080100 113081915 - MGP_LPJ_P0094637 Nradd protein_coding protein_coding MGP_LPJ_T0094638.1 MGP_LPJ_G0035240.1 mouse_genomes_project 9 113080477 113082971 - MGP_LPJ_P0094638 Nradd protein_coding protein_coding MGP_LPJ_T0094639.1 MGP_LPJ_G0035240.1 mouse_genomes_project 9 113081172 113083024 - Nradd protein_coding retained_intron MGP_LPJ_T0092803.1 MGP_LPJ_G0034906.1 mouse_genomes_project 9 71962965 72119323 - MGP_LPJ_P0092803 Cgnl1 protein_coding protein_coding MGP_LPJ_T0092804.1 MGP_LPJ_G0034906.1 mouse_genomes_project 9 71962965 72119323 - MGP_LPJ_P0092804 Cgnl1 protein_coding protein_coding MGP_LPJ_T0092805.1 MGP_LPJ_G0034906.1 mouse_genomes_project 9 71965315 71967566 - Cgnl1 protein_coding retained_intron MGP_LPJ_T0092806.1 MGP_LPJ_G0034906.1 mouse_genomes_project 9 71965667 72119281 - MGP_LPJ_P0092806 Cgnl1 protein_coding protein_coding MGP_LPJ_T0092807.1 MGP_LPJ_G0034906.1 mouse_genomes_project 9 71966794 71967787 - Cgnl1 protein_coding retained_intron MGP_LPJ_T0092808.1 MGP_LPJ_G0034906.1 mouse_genomes_project 9 71969093 71984935 - Cgnl1 protein_coding processed_transcript MGP_LPJ_T0092687.1 MGP_LPJ_G0034880.1 mouse_genomes_project 9 67179192 67205797 - MGP_LPJ_P0092687 Tpm1 protein_coding protein_coding MGP_LPJ_T0092688.1 MGP_LPJ_G0034880.1 mouse_genomes_project 9 67179192 67200451 - MGP_LPJ_P0092688 Tpm1 protein_coding protein_coding MGP_LPJ_T0092689.1 MGP_LPJ_G0034880.1 mouse_genomes_project 9 67179192 67205936 - MGP_LPJ_P0092689 Tpm1 protein_coding protein_coding MGP_LPJ_T0092690.1 MGP_LPJ_G0034880.1 mouse_genomes_project 9 67179194 67200346 - MGP_LPJ_P0092690 Tpm1 protein_coding protein_coding MGP_LPJ_T0092691.1 MGP_LPJ_G0034880.1 mouse_genomes_project 9 67179195 67205739 - MGP_LPJ_P0092691 Tpm1 protein_coding protein_coding MGP_LPJ_T0092692.1 MGP_LPJ_G0034880.1 mouse_genomes_project 9 67179195 67200506 - MGP_LPJ_P0092692 Tpm1 protein_coding protein_coding MGP_LPJ_T0092693.1 MGP_LPJ_G0034880.1 mouse_genomes_project 9 67179208 67205731 - MGP_LPJ_P0092693 Tpm1 protein_coding protein_coding MGP_LPJ_T0092694.1 MGP_LPJ_G0034880.1 mouse_genomes_project 9 67179208 67205716 - MGP_LPJ_P0092694 Tpm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0092695.1 MGP_LPJ_G0034880.1 mouse_genomes_project 9 67179217 67205805 - MGP_LPJ_P0092695 Tpm1 protein_coding protein_coding MGP_LPJ_T0092696.1 MGP_LPJ_G0034880.1 mouse_genomes_project 9 67179224 67200322 - MGP_LPJ_P0092696 Tpm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0092697.1 MGP_LPJ_G0034880.1 mouse_genomes_project 9 67180924 67205702 - MGP_LPJ_P0092697 Tpm1 protein_coding protein_coding MGP_LPJ_T0092698.1 MGP_LPJ_G0034880.1 mouse_genomes_project 9 67180926 67200250 - MGP_LPJ_P0092698 Tpm1 protein_coding protein_coding MGP_LPJ_T0092699.1 MGP_LPJ_G0034880.1 mouse_genomes_project 9 67184489 67205743 - MGP_LPJ_P0092699 Tpm1 protein_coding protein_coding MGP_LPJ_T0092700.1 MGP_LPJ_G0034880.1 mouse_genomes_project 9 67184489 67205794 - MGP_LPJ_P0092700 Tpm1 protein_coding protein_coding MGP_LPJ_T0092701.1 MGP_LPJ_G0034880.1 mouse_genomes_project 9 67184563 67200385 - MGP_LPJ_P0092701 Tpm1 protein_coding protein_coding MGP_LPJ_T0092702.1 MGP_LPJ_G0034880.1 mouse_genomes_project 9 67184586 67205673 - MGP_LPJ_P0092702 Tpm1 protein_coding protein_coding MGP_LPJ_T0092703.1 MGP_LPJ_G0034880.1 mouse_genomes_project 9 67184645 67200274 - MGP_LPJ_P0092703 Tpm1 protein_coding protein_coding MGP_LPJ_T0092704.1 MGP_LPJ_G0034880.1 mouse_genomes_project 9 67185445 67205792 - MGP_LPJ_P0092704 Tpm1 protein_coding protein_coding MGP_LPJ_T0092705.1 MGP_LPJ_G0034880.1 mouse_genomes_project 9 67186517 67189373 - Tpm1 protein_coding processed_transcript MGP_LPJ_T0092706.1 MGP_LPJ_G0034880.1 mouse_genomes_project 9 67188767 67205648 - Tpm1 protein_coding retained_intron MGP_LPJ_T0092707.1 MGP_LPJ_G0034880.1 mouse_genomes_project 9 67190337 67205721 - Tpm1 protein_coding processed_transcript MGP_LPJ_T0018480.1 MGP_LPJ_G0015655.1 mouse_genomes_project 9 42864313 42865973 - Gm20444 processed_transcript processed_transcript MGP_LPJ_T0002386.1 MGP_LPJ_G0002293.1 mouse_genomes_project 9 58137536 58138567 + TEC TEC MGP_LPJ_T0092119.1 MGP_LPJ_G0034716.1 mouse_genomes_project 9 53510226 53537314 - MGP_LPJ_P0092119 Cyp19a1 protein_coding protein_coding MGP_LPJ_T0094717.1 MGP_LPJ_G0035259.1 mouse_genomes_project 9 113616376 113703756 + MGP_LPJ_P0094717 Lrrfip2 protein_coding protein_coding MGP_LPJ_T0094718.1 MGP_LPJ_G0035259.1 mouse_genomes_project 9 113616895 113729869 + MGP_LPJ_P0094718 Lrrfip2 protein_coding protein_coding MGP_LPJ_T0094719.1 MGP_LPJ_G0035259.1 mouse_genomes_project 9 113616897 113728426 + MGP_LPJ_P0094719 Lrrfip2 protein_coding protein_coding MGP_LPJ_T0094720.1 MGP_LPJ_G0035259.1 mouse_genomes_project 9 113616919 113729869 + MGP_LPJ_P0094720 Lrrfip2 protein_coding protein_coding MGP_LPJ_T0094721.1 MGP_LPJ_G0035259.1 mouse_genomes_project 9 113616980 113729533 + MGP_LPJ_P0094721 Lrrfip2 protein_coding unknown_likely_coding MGP_LPJ_T0094722.1 MGP_LPJ_G0035259.1 mouse_genomes_project 9 113617230 113728426 + MGP_LPJ_P0094722 Lrrfip2 protein_coding protein_coding MGP_LPJ_T0094723.1 MGP_LPJ_G0035259.1 mouse_genomes_project 9 113618452 113728426 + MGP_LPJ_P0094723 Lrrfip2 protein_coding protein_coding MGP_LPJ_T0094725.1 MGP_LPJ_G0035259.1 mouse_genomes_project 9 113689348 113718498 + MGP_LPJ_P0094725 Lrrfip2 protein_coding protein_coding MGP_LPJ_T0094726.1 MGP_LPJ_G0035259.1 mouse_genomes_project 9 113697287 113729869 + Lrrfip2 protein_coding processed_transcript MGP_LPJ_T0094727.1 MGP_LPJ_G0035259.1 mouse_genomes_project 9 113703435 113710412 + Lrrfip2 protein_coding retained_intron MGP_LPJ_T0094728.1 MGP_LPJ_G0035259.1 mouse_genomes_project 9 113718491 113720741 + Lrrfip2 protein_coding retained_intron MGP_LPJ_T0094729.1 MGP_LPJ_G0035259.1 mouse_genomes_project 9 113723375 113728157 + Lrrfip2 protein_coding retained_intron MGP_LPJ_T0011095.1 MGP_LPJ_G0009213.1 mouse_genomes_project 9 67911084 67911148 - Mir7241 miRNA miRNA MGP_LPJ_T0101105.1 MGP_LPJ_G0039368.1 mouse_genomes_project 9 64110682 64110781 + Snord16a snoRNA snoRNA MGP_LPJ_T0091362.1 MGP_LPJ_G0034423.1 mouse_genomes_project 9 30386099 30513954 - MGP_LPJ_P0091362 Fli1 protein_coding protein_coding MGP_LPJ_T0091363.1 MGP_LPJ_G0034423.1 mouse_genomes_project 9 30391941 30515256 - MGP_LPJ_P0091363 Fli1 protein_coding protein_coding MGP_LPJ_T0090943.1 MGP_LPJ_G0034252.1 mouse_genomes_project 9 11800594 11804258 - MGP_LPJ_P0090943 Fut4 protein_coding protein_coding MGP_LPJ_T0011088.1 MGP_LPJ_G0009206.1 mouse_genomes_project 9 57784000 57784105 + Mir6385 miRNA miRNA MGP_LPJ_T0093124.1 MGP_LPJ_G0034977.1 mouse_genomes_project 9 83720968 83831329 - MGP_LPJ_P0093124 Phip protein_coding protein_coding MGP_LPJ_T0093125.1 MGP_LPJ_G0034977.1 mouse_genomes_project 9 83725131 83750980 - Phip protein_coding retained_intron MGP_LPJ_T0093126.1 MGP_LPJ_G0034977.1 mouse_genomes_project 9 83743829 83747115 - Phip protein_coding retained_intron MGP_LPJ_T0093127.1 MGP_LPJ_G0034977.1 mouse_genomes_project 9 83748913 83831221 - Phip protein_coding retained_intron MGP_LPJ_T0093128.1 MGP_LPJ_G0034977.1 mouse_genomes_project 9 83749269 83750700 - Phip protein_coding retained_intron MGP_LPJ_T0093129.1 MGP_LPJ_G0034977.1 mouse_genomes_project 9 83751772 83755765 - Phip protein_coding retained_intron MGP_LPJ_T0093130.1 MGP_LPJ_G0034977.1 mouse_genomes_project 9 83755307 83788094 - MGP_LPJ_P0093130 Phip protein_coding nonsense_mediated_decay MGP_LPJ_T0093131.1 MGP_LPJ_G0034977.1 mouse_genomes_project 9 83758094 83764249 - Phip protein_coding retained_intron MGP_LPJ_T0093132.1 MGP_LPJ_G0034977.1 mouse_genomes_project 9 83768405 83831239 - Phip protein_coding retained_intron MGP_LPJ_T0093133.1 MGP_LPJ_G0034977.1 mouse_genomes_project 9 83769015 83782638 - MGP_LPJ_P0093133 Phip protein_coding nonsense_mediated_decay MGP_LPJ_T0093134.1 MGP_LPJ_G0034977.1 mouse_genomes_project 9 83771136 83772925 - Phip protein_coding retained_intron MGP_LPJ_T0093135.1 MGP_LPJ_G0034977.1 mouse_genomes_project 9 83781366 83783670 - Phip protein_coding retained_intron MGP_LPJ_T0093136.1 MGP_LPJ_G0034977.1 mouse_genomes_project 9 83782676 83830081 - MGP_LPJ_P0093136 Phip protein_coding protein_coding MGP_LPJ_T0093137.1 MGP_LPJ_G0034977.1 mouse_genomes_project 9 83785484 83788551 - Phip protein_coding retained_intron MGP_LPJ_T0093138.1 MGP_LPJ_G0034977.1 mouse_genomes_project 9 83800025 83831229 - Phip protein_coding retained_intron MGP_LPJ_T0093139.1 MGP_LPJ_G0034977.1 mouse_genomes_project 9 83811379 83831232 - Phip protein_coding retained_intron MGP_LPJ_T0090831.1 MGP_LPJ_G0034215.1 mouse_genomes_project 9 3141685 3143205 - MGP_LPJ_P0090831 Ddi1 protein_coding protein_coding MGP_LPJ_T0091011.1 MGP_LPJ_G0034274.1 mouse_genomes_project 9 15674122 15676685 + MGP_LPJ_P0091011 Gm5612 protein_coding protein_coding MGP_LPJ_T0091195.1 MGP_LPJ_G0034361.1 mouse_genomes_project 9 19196093 19254144 - MGP_LPJ_P0091195 Dock6 protein_coding protein_coding MGP_LPJ_T0091196.1 MGP_LPJ_G0034361.1 mouse_genomes_project 9 19196266 19235207 - MGP_LPJ_P0091196 Dock6 protein_coding unknown_likely_coding MGP_LPJ_T0091198.1 MGP_LPJ_G0034361.1 mouse_genomes_project 9 19237666 19254097 - MGP_LPJ_P0091198 Dock6 protein_coding unknown_likely_coding MGP_LPJ_T0091233.1 MGP_LPJ_G0034379.1 mouse_genomes_project 9 19655752 19678138 + MGP_LPJ_P0091233 Zfp872 protein_coding protein_coding MGP_LPJ_T0091234.1 MGP_LPJ_G0034379.1 mouse_genomes_project 9 19667818 19673292 + MGP_LPJ_P0091234 Zfp872 protein_coding protein_coding MGP_LPJ_T0091110.1 MGP_LPJ_G0034327.1 mouse_genomes_project 9 18220574 18226487 - MGP_LPJ_P0091110 Angptl6 protein_coding protein_coding MGP_LPJ_T0095025.1 MGP_LPJ_G0035342.1 mouse_genomes_project 9 125151373 125160818 - MGP_LPJ_P0095025 Higd1a protein_coding protein_coding MGP_LPJ_T0092963.1 MGP_LPJ_G0034931.1 mouse_genomes_project 9 75866127 75899411 + MGP_LPJ_P0092963 Gnb5 protein_coding protein_coding MGP_LPJ_T0016098.1 MGP_LPJ_G0014189.1 mouse_genomes_project 9 103055905 103056158 - processed_pseudogene processed_pseudogene MGP_LPJ_T0016086.1 MGP_LPJ_G0014177.1 mouse_genomes_project 9 98288041 98288309 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011064.1 MGP_LPJ_G0009182.1 mouse_genomes_project 9 18263580 18263655 - Mir7081 miRNA miRNA MGP_LPJ_T0093511.1 MGP_LPJ_G0035055.1 mouse_genomes_project 9 100629787 100741875 - MGP_LPJ_P0093511 Pik3cb protein_coding protein_coding MGP_LPJ_T0093512.1 MGP_LPJ_G0035055.1 mouse_genomes_project 9 100631534 100741713 - MGP_LPJ_P0093512 Pik3cb protein_coding nonsense_mediated_decay MGP_LPJ_T0093513.1 MGP_LPJ_G0035055.1 mouse_genomes_project 9 100700569 100742409 - MGP_LPJ_P0093513 Pik3cb protein_coding protein_coding MGP_LPJ_T0091723.1 MGP_LPJ_G0034588.1 mouse_genomes_project 9 42901379 42905836 + MGP_LPJ_P0091723 Mcam protein_coding nonsense_mediated_decay MGP_LPJ_T0091724.1 MGP_LPJ_G0034588.1 mouse_genomes_project 9 42901564 42908702 + MGP_LPJ_P0091724 Mcam protein_coding protein_coding MGP_LPJ_T0091725.1 MGP_LPJ_G0034588.1 mouse_genomes_project 9 42903453 42904178 + MGP_LPJ_P0091725 Mcam protein_coding protein_coding MGP_LPJ_T0091726.1 MGP_LPJ_G0034588.1 mouse_genomes_project 9 42903770 42906583 + Mcam protein_coding retained_intron MGP_LPJ_T0091814.1 MGP_LPJ_G0034614.1 mouse_genomes_project 9 43623264 43628741 - Tmem25 protein_coding processed_transcript MGP_LPJ_T0091815.1 MGP_LPJ_G0034614.1 mouse_genomes_project 9 43623264 43628741 - MGP_LPJ_P0091815 Tmem25 protein_coding protein_coding MGP_LPJ_T0091816.1 MGP_LPJ_G0034614.1 mouse_genomes_project 9 43623264 43628806 - MGP_LPJ_P0091816 Tmem25 protein_coding protein_coding MGP_LPJ_T0091238.1 MGP_LPJ_G0034383.1 mouse_genomes_project 9 19823783 19884858 - MGP_LPJ_P0091238 Anln protein_coding protein_coding MGP_LPJ_T0002397.1 MGP_LPJ_G0002304.1 mouse_genomes_project 9 72713500 72714485 + TEC TEC MGP_LPJ_T0091566.1 MGP_LPJ_G0034508.1 mouse_genomes_project 9 36977263 37002630 + MGP_LPJ_P0091566 Vwa5a protein_coding protein_coding MGP_LPJ_T0091567.1 MGP_LPJ_G0034508.1 mouse_genomes_project 9 36977267 37002055 + MGP_LPJ_P0091567 Vwa5a protein_coding protein_coding MGP_LPJ_T0091568.1 MGP_LPJ_G0034508.1 mouse_genomes_project 9 36978033 36981768 + MGP_LPJ_P0091568 Vwa5a protein_coding protein_coding MGP_LPJ_T0091569.1 MGP_LPJ_G0034508.1 mouse_genomes_project 9 36987651 36994012 + Vwa5a protein_coding retained_intron MGP_LPJ_T0091570.1 MGP_LPJ_G0034508.1 mouse_genomes_project 9 36993803 36995439 + Vwa5a protein_coding retained_intron MGP_LPJ_T0091571.1 MGP_LPJ_G0034508.1 mouse_genomes_project 9 36995279 36997283 + Vwa5a protein_coding retained_intron MGP_LPJ_T0091572.1 MGP_LPJ_G0034508.1 mouse_genomes_project 9 36995477 37001213 + MGP_LPJ_P0091572 Vwa5a protein_coding nonsense_mediated_decay MGP_LPJ_T0101413.1 MGP_LPJ_G0039588.1 mouse_genomes_project 9 11900118 11900466 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0091844.1 MGP_LPJ_G0034625.1 mouse_genomes_project 9 43949015 43978892 - MGP_LPJ_P0091844 Gm10684 protein_coding protein_coding MGP_LPJ_T0093594.1 MGP_LPJ_G0035071.1 mouse_genomes_project 9 102776815 102801272 + MGP_LPJ_P0093594 Msl2 protein_coding protein_coding MGP_LPJ_T0093595.1 MGP_LPJ_G0035071.1 mouse_genomes_project 9 102777475 102803483 + MGP_LPJ_P0093595 Msl2 protein_coding protein_coding MGP_LPJ_T0092660.1 MGP_LPJ_G0034872.1 mouse_genomes_project 9 66601405 66607541 - MGP_LPJ_P0092660 Fbxl22 protein_coding protein_coding MGP_LPJ_T0016060.1 MGP_LPJ_G0014151.1 mouse_genomes_project 9 89220209 89220795 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002404.1 MGP_LPJ_G0002311.1 mouse_genomes_project 9 73126326 73130294 + TEC TEC MGP_LPJ_T0094193.1 MGP_LPJ_G0035171.1 mouse_genomes_project 9 110168433 110200855 - MGP_LPJ_P0094193 Rnf123 protein_coding protein_coding MGP_LPJ_T0094194.1 MGP_LPJ_G0035171.1 mouse_genomes_project 9 110168565 110196810 - MGP_LPJ_P0094194 Rnf123 protein_coding protein_coding MGP_LPJ_T0094195.1 MGP_LPJ_G0035171.1 mouse_genomes_project 9 110168570 110197249 - Rnf123 protein_coding retained_intron MGP_LPJ_T0094196.1 MGP_LPJ_G0035171.1 mouse_genomes_project 9 110168570 110196810 - MGP_LPJ_P0094196 Rnf123 protein_coding protein_coding MGP_LPJ_T0094197.1 MGP_LPJ_G0035171.1 mouse_genomes_project 9 110168570 110196884 - MGP_LPJ_P0094197 Rnf123 protein_coding protein_coding MGP_LPJ_T0094198.1 MGP_LPJ_G0035171.1 mouse_genomes_project 9 110168586 110169124 - Rnf123 protein_coding retained_intron MGP_LPJ_T0094199.1 MGP_LPJ_G0035171.1 mouse_genomes_project 9 110169118 110176634 - MGP_LPJ_P0094199 Rnf123 protein_coding nonsense_mediated_decay MGP_LPJ_T0094200.1 MGP_LPJ_G0035171.1 mouse_genomes_project 9 110169127 110196884 - MGP_LPJ_P0094200 Rnf123 protein_coding protein_coding MGP_LPJ_T0094201.1 MGP_LPJ_G0035171.1 mouse_genomes_project 9 110169135 110169593 - Rnf123 protein_coding retained_intron MGP_LPJ_T0094203.1 MGP_LPJ_G0035171.1 mouse_genomes_project 9 110172797 110197237 - Rnf123 protein_coding retained_intron MGP_LPJ_T0094204.1 MGP_LPJ_G0035171.1 mouse_genomes_project 9 110172964 110173938 - Rnf123 protein_coding retained_intron MGP_LPJ_T0094205.1 MGP_LPJ_G0035171.1 mouse_genomes_project 9 110173458 110176669 - MGP_LPJ_P0094205 Rnf123 protein_coding nonsense_mediated_decay MGP_LPJ_T0094206.1 MGP_LPJ_G0035171.1 mouse_genomes_project 9 110175065 110178893 - Rnf123 protein_coding retained_intron MGP_LPJ_T0094207.1 MGP_LPJ_G0035171.1 mouse_genomes_project 9 110188076 110195770 - MGP_LPJ_P0094207 Rnf123 protein_coding protein_coding MGP_LPJ_T0094208.1 MGP_LPJ_G0035171.1 mouse_genomes_project 9 110188135 110196814 - MGP_LPJ_P0094208 Rnf123 protein_coding protein_coding MGP_LPJ_T0094209.1 MGP_LPJ_G0035171.1 mouse_genomes_project 9 110189173 110196775 - MGP_LPJ_P0094209 Rnf123 protein_coding protein_coding MGP_LPJ_T0094210.1 MGP_LPJ_G0035171.1 mouse_genomes_project 9 110195222 110200853 - MGP_LPJ_P0094210 Rnf123 protein_coding protein_coding MGP_LPJ_T0092069.1 MGP_LPJ_G0034694.1 mouse_genomes_project 9 50560504 50568784 - MGP_LPJ_P0092069 Gm684 protein_coding protein_coding MGP_LPJ_T0091099.1 MGP_LPJ_G0034322.1 mouse_genomes_project 9 17982406 17998070 + MGP_LPJ_P0091099 Pin1 protein_coding protein_coding MGP_LPJ_T0092366.1 MGP_LPJ_G0034791.1 mouse_genomes_project 9 58411531 58450031 + MGP_LPJ_P0092366 Hcn4 protein_coding protein_coding MGP_LPJ_T0091032.1 MGP_LPJ_G0034292.1 mouse_genomes_project 9 16658820 16659759 - MGP_LPJ_P0091032 Olfr847 protein_coding protein_coding MGP_LPJ_T0092457.1 MGP_LPJ_G0034814.1 mouse_genomes_project 9 61852228 61865586 - MGP_LPJ_P0092457 Glce protein_coding protein_coding MGP_LPJ_T0092458.1 MGP_LPJ_G0034814.1 mouse_genomes_project 9 61852228 61916936 - MGP_LPJ_P0092458 Glce protein_coding protein_coding MGP_LPJ_T0092459.1 MGP_LPJ_G0034814.1 mouse_genomes_project 9 61854992 61865820 - Glce protein_coding retained_intron MGP_LPJ_T0092460.1 MGP_LPJ_G0034814.1 mouse_genomes_project 9 61865447 61916981 - MGP_LPJ_P0092460 Glce protein_coding protein_coding MGP_LPJ_T0092461.1 MGP_LPJ_G0034814.1 mouse_genomes_project 9 61875298 61916935 - Glce protein_coding processed_transcript MGP_LPJ_T0016126.1 MGP_LPJ_G0014217.1 mouse_genomes_project 9 123574624 123575051 + processed_pseudogene processed_pseudogene MGP_LPJ_T0091048.1 MGP_LPJ_G0034308.1 mouse_genomes_project 9 17434816 17447413 + MGP_LPJ_P0091048 Olfr869 protein_coding protein_coding MGP_LPJ_T0101132.1 MGP_LPJ_G0039395.1 mouse_genomes_project 9 104825500 104825630 - Gm22595 snoRNA snoRNA MGP_LPJ_T0091753.1 MGP_LPJ_G0034595.1 mouse_genomes_project 9 43086732 43099304 - MGP_LPJ_P0091753 C2cd2l protein_coding protein_coding MGP_LPJ_T0091379.1 MGP_LPJ_G0034426.1 mouse_genomes_project 9 33111982 33169137 - MGP_LPJ_P0091379 St3gal4 protein_coding protein_coding MGP_LPJ_T0099801.1 MGP_LPJ_G0038064.1 mouse_genomes_project 9 98886 98990 + Gm23275 snRNA snRNA MGP_LPJ_T0018529.1 MGP_LPJ_G0015675.1 mouse_genomes_project 9 103509005 103601254 - Gm29521 processed_transcript lincRNA MGP_LPJ_T0018530.1 MGP_LPJ_G0015675.1 mouse_genomes_project 9 103598084 103601296 - Gm29521 processed_transcript retained_intron MGP_LPJ_T0002411.1 MGP_LPJ_G0002318.1 mouse_genomes_project 9 74338212 74341214 - TEC TEC MGP_LPJ_T0009343.1 MGP_LPJ_G0007508.1 mouse_genomes_project 9 109418495 109419269 - 4930429P21Rik lincRNA lincRNA MGP_LPJ_T0009344.1 MGP_LPJ_G0007508.1 mouse_genomes_project 9 109419004 109421224 - 4930429P21Rik lincRNA lincRNA MGP_LPJ_T0090974.1 MGP_LPJ_G0034264.1 mouse_genomes_project 9 12402137 12444205 - MGP_LPJ_P0090974 Cep295 protein_coding protein_coding MGP_LPJ_T0090975.1 MGP_LPJ_G0034264.1 mouse_genomes_project 9 12402137 12419828 - MGP_LPJ_P0090975 Cep295 protein_coding protein_coding MGP_LPJ_T0090976.1 MGP_LPJ_G0034264.1 mouse_genomes_project 9 12402139 12419935 - Cep295 protein_coding retained_intron MGP_LPJ_T0090977.1 MGP_LPJ_G0034264.1 mouse_genomes_project 9 12402142 12427530 - Cep295 protein_coding retained_intron MGP_LPJ_T0090978.1 MGP_LPJ_G0034264.1 mouse_genomes_project 9 12402319 12441127 - MGP_LPJ_P0090978 Cep295 protein_coding protein_coding MGP_LPJ_T0090979.1 MGP_LPJ_G0034264.1 mouse_genomes_project 9 12402319 12444160 - MGP_LPJ_P0090979 Cep295 protein_coding protein_coding MGP_LPJ_T0090980.1 MGP_LPJ_G0034264.1 mouse_genomes_project 9 12402495 12403180 - Cep295 protein_coding retained_intron MGP_LPJ_T0090981.1 MGP_LPJ_G0034264.1 mouse_genomes_project 9 12408221 12412615 - MGP_LPJ_P0090981 Cep295 protein_coding protein_coding MGP_LPJ_T0090982.1 MGP_LPJ_G0034264.1 mouse_genomes_project 9 12411977 12418414 - MGP_LPJ_P0090982 Cep295 protein_coding protein_coding MGP_LPJ_T0090983.1 MGP_LPJ_G0034264.1 mouse_genomes_project 9 12412040 12413512 - Cep295 protein_coding retained_intron MGP_LPJ_T0090984.1 MGP_LPJ_G0034264.1 mouse_genomes_project 9 12429885 12437321 - Cep295 protein_coding processed_transcript MGP_LPJ_T0090985.1 MGP_LPJ_G0034264.1 mouse_genomes_project 9 12431074 12437851 - Cep295 protein_coding retained_intron MGP_LPJ_T0090986.1 MGP_LPJ_G0034264.1 mouse_genomes_project 9 12432996 12438232 - Cep295 protein_coding retained_intron MGP_LPJ_T0091297.1 MGP_LPJ_G0034403.1 mouse_genomes_project 9 24661789 24690259 - MGP_LPJ_P0091297 Vps26b protein_coding protein_coding MGP_LPJ_T0016104.1 MGP_LPJ_G0014195.1 mouse_genomes_project 9 105174015 105189629 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098683.1 MGP_LPJ_G0036952.1 mouse_genomes_project 9 25896248 25897606 + Gm15606 sense_intronic sense_intronic MGP_LPJ_T0098684.1 MGP_LPJ_G0036952.1 mouse_genomes_project 9 25896301 25897883 + Gm15606 sense_intronic sense_intronic MGP_LPJ_T0091037.1 MGP_LPJ_G0034297.1 mouse_genomes_project 9 16880533 16881481 - MGP_LPJ_P0091037 Olfr854 protein_coding protein_coding MGP_LPJ_T0091127.1 MGP_LPJ_G0034339.1 mouse_genomes_project 9 18460173 18489464 - MGP_LPJ_P0091127 Tyk2 protein_coding unknown_likely_coding MGP_LPJ_T0091128.1 MGP_LPJ_G0034339.1 mouse_genomes_project 9 18460178 18485601 - MGP_LPJ_P0091128 Tyk2 protein_coding protein_coding MGP_LPJ_T0098078.1 MGP_LPJ_G0036359.1 mouse_genomes_project 9 112459289 112462468 + pseudogene pseudogene MGP_LPJ_T0092793.1 MGP_LPJ_G0034904.1 mouse_genomes_project 9 71811720 71928711 - MGP_LPJ_P0092793 Gcom1 protein_coding nonsense_mediated_decay MGP_LPJ_T0092794.1 MGP_LPJ_G0034904.1 mouse_genomes_project 9 71811720 71928711 - MGP_LPJ_P0092794 Gcom1 protein_coding nonsense_mediated_decay MGP_LPJ_T0092795.1 MGP_LPJ_G0034904.1 mouse_genomes_project 9 71811720 71928711 - MGP_LPJ_P0092795 Gcom1 protein_coding protein_coding MGP_LPJ_T0092796.1 MGP_LPJ_G0034904.1 mouse_genomes_project 9 71811720 71928711 - MGP_LPJ_P0092796 Gcom1 protein_coding protein_coding MGP_LPJ_T0093704.1 MGP_LPJ_G0035095.1 mouse_genomes_project 9 105937412 105959977 - Ackr4 protein_coding processed_transcript MGP_LPJ_T0093707.1 MGP_LPJ_G0035095.1 mouse_genomes_project 9 105955538 105985839 - MGP_LPJ_P0093707 Ackr4 protein_coding protein_coding MGP_LPJ_T0093708.1 MGP_LPJ_G0035095.1 mouse_genomes_project 9 105955669 105960436 - MGP_LPJ_P0093708 Ackr4 protein_coding protein_coding MGP_LPJ_T0002454.1 MGP_LPJ_G0002360.1 mouse_genomes_project 9 102380171 102381294 + TEC TEC MGP_LPJ_T0016114.1 MGP_LPJ_G0014205.1 mouse_genomes_project 9 109244587 109245856 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099802.1 MGP_LPJ_G0038065.1 mouse_genomes_project 9 3605736 3605841 - Gm23097 snRNA snRNA MGP_LPJ_T0094472.1 MGP_LPJ_G0035210.1 mouse_genomes_project 9 111200405 111216492 - MGP_LPJ_P0094472 Gm42641 protein_coding nonsense_mediated_decay MGP_LPJ_T0094474.1 MGP_LPJ_G0035210.1 mouse_genomes_project 9 111200408 111216541 - Gm42641 protein_coding retained_intron MGP_LPJ_T0094476.1 MGP_LPJ_G0035210.1 mouse_genomes_project 9 111200942 111202811 - MGP_LPJ_P0094476 Gm42641 protein_coding protein_coding MGP_LPJ_T0011753.1 MGP_LPJ_G0009871.1 mouse_genomes_project 9 77404807 77405100 - Gm23791 misc_RNA misc_RNA MGP_LPJ_T0093653.1 MGP_LPJ_G0035085.1 mouse_genomes_project 9 105020140 105048901 - MGP_LPJ_P0093653 Trf protein_coding protein_coding MGP_LPJ_T0093654.1 MGP_LPJ_G0035085.1 mouse_genomes_project 9 105027438 105049072 - MGP_LPJ_P0093654 Trf protein_coding protein_coding MGP_LPJ_T0093655.1 MGP_LPJ_G0035085.1 mouse_genomes_project 9 105027668 105030621 - Trf protein_coding retained_intron MGP_LPJ_T0093656.1 MGP_LPJ_G0035085.1 mouse_genomes_project 9 105029182 105038520 - MGP_LPJ_P0093656 Trf protein_coding protein_coding MGP_LPJ_T0093657.1 MGP_LPJ_G0035085.1 mouse_genomes_project 9 105029250 105040725 - MGP_LPJ_P0093657 Trf protein_coding protein_coding MGP_LPJ_T0093658.1 MGP_LPJ_G0035085.1 mouse_genomes_project 9 105034449 105048898 - MGP_LPJ_P0093658 Trf protein_coding nonsense_mediated_decay MGP_LPJ_T0093659.1 MGP_LPJ_G0035085.1 mouse_genomes_project 9 105039548 105041339 - Trf protein_coding retained_intron MGP_LPJ_T0093660.1 MGP_LPJ_G0035085.1 mouse_genomes_project 9 105040758 105048894 - MGP_LPJ_P0093660 Trf protein_coding protein_coding MGP_LPJ_T0093661.1 MGP_LPJ_G0035085.1 mouse_genomes_project 9 105041748 105047116 - MGP_LPJ_P0093661 Trf protein_coding protein_coding MGP_LPJ_T0002474.1 MGP_LPJ_G0002380.1 mouse_genomes_project 9 106123634 106125147 + TEC TEC MGP_LPJ_T0091053.1 MGP_LPJ_G0034313.1 mouse_genomes_project 9 17608780 17609842 + MGP_LPJ_P0091053 Olfr873 protein_coding protein_coding MGP_LPJ_T0092091.1 MGP_LPJ_G0034705.1 mouse_genomes_project 9 52731582 52760313 + MGP_LPJ_P0092091 4930550C14Rik protein_coding protein_coding MGP_LPJ_T0091063.1 MGP_LPJ_G0034317.1 mouse_genomes_project 9 17773476 17783190 - MGP_LPJ_P0091063 Zfp426 protein_coding nonsense_mediated_decay MGP_LPJ_T0091064.1 MGP_LPJ_G0034317.1 mouse_genomes_project 9 17773635 17797663 - MGP_LPJ_P0091064 Zfp426 protein_coding protein_coding MGP_LPJ_T0091065.1 MGP_LPJ_G0034317.1 mouse_genomes_project 9 17773847 17797657 - MGP_LPJ_P0091065 Zfp426 protein_coding protein_coding MGP_LPJ_T0091066.1 MGP_LPJ_G0034317.1 mouse_genomes_project 9 17774753 17797663 - MGP_LPJ_P0091066 Zfp426 protein_coding protein_coding MGP_LPJ_T0091067.1 MGP_LPJ_G0034317.1 mouse_genomes_project 9 17775912 17778390 - Zfp426 protein_coding retained_intron MGP_LPJ_T0091068.1 MGP_LPJ_G0034317.1 mouse_genomes_project 9 17776058 17797652 - MGP_LPJ_P0091068 Zfp426 protein_coding nonsense_mediated_decay MGP_LPJ_T0091069.1 MGP_LPJ_G0034317.1 mouse_genomes_project 9 17776103 17795726 - MGP_LPJ_P0091069 Zfp426 protein_coding protein_coding MGP_LPJ_T0091070.1 MGP_LPJ_G0034317.1 mouse_genomes_project 9 17778032 17783174 - MGP_LPJ_P0091070 Zfp426 protein_coding protein_coding MGP_LPJ_T0091071.1 MGP_LPJ_G0034317.1 mouse_genomes_project 9 17779863 17797622 - MGP_LPJ_P0091071 Zfp426 protein_coding protein_coding MGP_LPJ_T0091072.1 MGP_LPJ_G0034317.1 mouse_genomes_project 9 17781349 17797632 - MGP_LPJ_P0091072 Zfp426 protein_coding protein_coding MGP_LPJ_T0101416.1 MGP_LPJ_G0039590.1 mouse_genomes_project 9 56383950 56384509 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0094651.1 MGP_LPJ_G0035242.1 mouse_genomes_project 9 113115103 113173094 + MGP_LPJ_P0094651 Ccdc12 protein_coding protein_coding MGP_LPJ_T0094652.1 MGP_LPJ_G0035242.1 mouse_genomes_project 9 113115125 113116279 + Ccdc12 protein_coding retained_intron MGP_LPJ_T0094653.1 MGP_LPJ_G0035242.1 mouse_genomes_project 9 113115130 113161339 + Ccdc12 protein_coding retained_intron MGP_LPJ_T0094654.1 MGP_LPJ_G0035242.1 mouse_genomes_project 9 113115138 113172743 + MGP_LPJ_P0094654 Ccdc12 protein_coding protein_coding MGP_LPJ_T0094655.1 MGP_LPJ_G0035242.1 mouse_genomes_project 9 113115142 113170225 + Ccdc12 protein_coding retained_intron MGP_LPJ_T0094656.1 MGP_LPJ_G0035242.1 mouse_genomes_project 9 113115212 113173001 + Ccdc12 protein_coding processed_transcript MGP_LPJ_T0094657.1 MGP_LPJ_G0035242.1 mouse_genomes_project 9 113127821 113172773 + Ccdc12 protein_coding processed_transcript MGP_LPJ_T0094658.1 MGP_LPJ_G0035242.1 mouse_genomes_project 9 113171381 113173075 + MGP_LPJ_P0094658 Ccdc12 protein_coding protein_coding MGP_LPJ_T0094659.1 MGP_LPJ_G0035242.1 mouse_genomes_project 9 113171498 113173081 + Ccdc12 protein_coding retained_intron MGP_LPJ_T0094660.1 MGP_LPJ_G0035242.1 mouse_genomes_project 9 113171531 113172952 + Ccdc12 protein_coding retained_intron MGP_LPJ_T0101122.1 MGP_LPJ_G0039385.1 mouse_genomes_project 9 87761158 87761286 + Gm22138 snoRNA snoRNA MGP_LPJ_T0094949.1 MGP_LPJ_G0035323.1 mouse_genomes_project 9 123311190 123330689 + MGP_LPJ_P0094949 Mobp protein_coding protein_coding MGP_LPJ_T0094950.1 MGP_LPJ_G0035323.1 mouse_genomes_project 9 123311190 123342795 + MGP_LPJ_P0094950 Mobp protein_coding nonsense_mediated_decay MGP_LPJ_T0094951.1 MGP_LPJ_G0035323.1 mouse_genomes_project 9 123311190 123337402 + MGP_LPJ_P0094951 Mobp protein_coding protein_coding MGP_LPJ_T0094952.1 MGP_LPJ_G0035323.1 mouse_genomes_project 9 123311190 123337402 + MGP_LPJ_P0094952 Mobp protein_coding protein_coding MGP_LPJ_T0091875.1 MGP_LPJ_G0034637.1 mouse_genomes_project 9 44783162 44826896 - MGP_LPJ_P0091875 Rnf214 protein_coding protein_coding MGP_LPJ_T0091876.1 MGP_LPJ_G0034637.1 mouse_genomes_project 9 44783432 44826904 - MGP_LPJ_P0091876 Rnf214 protein_coding protein_coding MGP_LPJ_T0091877.1 MGP_LPJ_G0034637.1 mouse_genomes_project 9 44783432 44826424 - MGP_LPJ_P0091877 Rnf214 protein_coding protein_coding MGP_LPJ_T0091878.1 MGP_LPJ_G0034637.1 mouse_genomes_project 9 44784031 44826390 - Rnf214 protein_coding retained_intron MGP_LPJ_T0091879.1 MGP_LPJ_G0034637.1 mouse_genomes_project 9 44784040 44826888 - MGP_LPJ_P0091879 Rnf214 protein_coding nonsense_mediated_decay MGP_LPJ_T0091880.1 MGP_LPJ_G0034637.1 mouse_genomes_project 9 44784575 44826921 - MGP_LPJ_P0091880 Rnf214 protein_coding protein_coding MGP_LPJ_T0091881.1 MGP_LPJ_G0034637.1 mouse_genomes_project 9 44789006 44789619 - Rnf214 protein_coding retained_intron MGP_LPJ_T0091882.1 MGP_LPJ_G0034637.1 mouse_genomes_project 9 44791707 44792380 - Rnf214 protein_coding retained_intron MGP_LPJ_T0091883.1 MGP_LPJ_G0034637.1 mouse_genomes_project 9 44810547 44818560 - Rnf214 protein_coding retained_intron MGP_LPJ_T0091884.1 MGP_LPJ_G0034637.1 mouse_genomes_project 9 44810885 44826404 - MGP_LPJ_P0091884 Rnf214 protein_coding nonsense_mediated_decay MGP_LPJ_T0091885.1 MGP_LPJ_G0034637.1 mouse_genomes_project 9 44816051 44820116 - Rnf214 protein_coding retained_intron MGP_LPJ_T0091390.1 MGP_LPJ_G0034430.1 mouse_genomes_project 9 33259784 33266605 - MGP_LPJ_P0091390 Foxred1 protein_coding nonsense_mediated_decay MGP_LPJ_T0091391.1 MGP_LPJ_G0034430.1 mouse_genomes_project 9 33259786 33266623 - Foxred1 protein_coding retained_intron MGP_LPJ_T0091392.1 MGP_LPJ_G0034430.1 mouse_genomes_project 9 33259786 33266639 - Foxred1 protein_coding retained_intron MGP_LPJ_T0091393.1 MGP_LPJ_G0034430.1 mouse_genomes_project 9 33259786 33266649 - MGP_LPJ_P0091393 Foxred1 protein_coding protein_coding MGP_LPJ_T0091394.1 MGP_LPJ_G0034430.1 mouse_genomes_project 9 33259786 33266724 - MGP_LPJ_P0091394 Foxred1 protein_coding protein_coding MGP_LPJ_T0091395.1 MGP_LPJ_G0034430.1 mouse_genomes_project 9 33259786 33266670 - MGP_LPJ_P0091395 Foxred1 protein_coding nonsense_mediated_decay MGP_LPJ_T0091396.1 MGP_LPJ_G0034430.1 mouse_genomes_project 9 33260440 33261497 - Foxred1 protein_coding retained_intron MGP_LPJ_T0091397.1 MGP_LPJ_G0034430.1 mouse_genomes_project 9 33260759 33261809 - MGP_LPJ_P0091397 Foxred1 protein_coding protein_coding MGP_LPJ_T0091398.1 MGP_LPJ_G0034430.1 mouse_genomes_project 9 33261661 33266615 - Foxred1 protein_coding retained_intron MGP_LPJ_T0091399.1 MGP_LPJ_G0034430.1 mouse_genomes_project 9 33261797 33266665 - MGP_LPJ_P0091399 Foxred1 protein_coding protein_coding MGP_LPJ_T0091400.1 MGP_LPJ_G0034430.1 mouse_genomes_project 9 33263114 33266591 - MGP_LPJ_P0091400 Foxred1 protein_coding nonsense_mediated_decay MGP_LPJ_T0091401.1 MGP_LPJ_G0034430.1 mouse_genomes_project 9 33263124 33266566 - MGP_LPJ_P0091401 Foxred1 protein_coding nonsense_mediated_decay MGP_LPJ_T0092258.1 MGP_LPJ_G0034756.1 mouse_genomes_project 9 56605420 56610752 - MGP_LPJ_P0092258 Neil1 protein_coding protein_coding MGP_LPJ_T0092259.1 MGP_LPJ_G0034756.1 mouse_genomes_project 9 56605690 56610930 - MGP_LPJ_P0092259 Neil1 protein_coding protein_coding MGP_LPJ_T0092260.1 MGP_LPJ_G0034756.1 mouse_genomes_project 9 56605876 56609659 - MGP_LPJ_P0092260 Neil1 protein_coding protein_coding MGP_LPJ_T0009265.1 MGP_LPJ_G0007446.1 mouse_genomes_project 9 57940557 57944237 + 1700072B07Rik lincRNA lincRNA MGP_LPJ_T0092454.1 MGP_LPJ_G0034813.1 mouse_genomes_project 9 61748486 61828561 - Paqr5 protein_coding processed_transcript MGP_LPJ_T0092455.1 MGP_LPJ_G0034813.1 mouse_genomes_project 9 61748743 61828616 - MGP_LPJ_P0092455 Paqr5 protein_coding protein_coding MGP_LPJ_T0092456.1 MGP_LPJ_G0034813.1 mouse_genomes_project 9 61751051 61770843 - MGP_LPJ_P0092456 Paqr5 protein_coding protein_coding MGP_LPJ_T0091382.1 MGP_LPJ_G0034428.1 mouse_genomes_project 9 33239673 33256155 - MGP_LPJ_P0091382 Tirap protein_coding protein_coding MGP_LPJ_T0091383.1 MGP_LPJ_G0034428.1 mouse_genomes_project 9 33241904 33255853 - MGP_LPJ_P0091383 Tirap protein_coding protein_coding MGP_LPJ_T0091384.1 MGP_LPJ_G0034428.1 mouse_genomes_project 9 33241904 33255793 - MGP_LPJ_P0091384 Tirap protein_coding protein_coding MGP_LPJ_T0091385.1 MGP_LPJ_G0034428.1 mouse_genomes_project 9 33242466 33255835 - MGP_LPJ_P0091385 Tirap protein_coding protein_coding MGP_LPJ_T0091386.1 MGP_LPJ_G0034428.1 mouse_genomes_project 9 33243859 33255748 - MGP_LPJ_P0091386 Tirap protein_coding protein_coding MGP_LPJ_T0091387.1 MGP_LPJ_G0034428.1 mouse_genomes_project 9 33244156 33246539 - MGP_LPJ_P0091387 Tirap protein_coding protein_coding MGP_LPJ_T0091388.1 MGP_LPJ_G0034428.1 mouse_genomes_project 9 33246175 33255364 - MGP_LPJ_P0091388 Tirap protein_coding protein_coding MGP_LPJ_T0009236.1 MGP_LPJ_G0007423.1 mouse_genomes_project 9 32051404 32072402 + 7630403G23Rik lincRNA lincRNA MGP_LPJ_T0009262.1 MGP_LPJ_G0007443.1 mouse_genomes_project 9 56640663 56651382 + 1700041C23Rik lincRNA lincRNA MGP_LPJ_T0093607.1 MGP_LPJ_G0035075.1 mouse_genomes_project 9 104273380 104315221 + MGP_LPJ_P0093607 Ky protein_coding protein_coding MGP_LPJ_T0093608.1 MGP_LPJ_G0035075.1 mouse_genomes_project 9 104290295 104296982 + Ky protein_coding retained_intron MGP_LPJ_T0016022.1 MGP_LPJ_G0014113.1 mouse_genomes_project 9 73490092 73490399 + processed_pseudogene processed_pseudogene MGP_LPJ_T0091564.1 MGP_LPJ_G0034506.1 mouse_genomes_project 9 36930661 36931639 - MGP_LPJ_P0091564 Olfr918 protein_coding protein_coding MGP_LPJ_T0101121.1 MGP_LPJ_G0039384.1 mouse_genomes_project 9 86775177 86775307 - Gm22830 snoRNA snoRNA MGP_LPJ_T0016009.1 MGP_LPJ_G0014100.1 mouse_genomes_project 9 65299949 65300337 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099844.1 MGP_LPJ_G0038107.1 mouse_genomes_project 9 73398535 73398642 + Gm23567 snRNA snRNA MGP_LPJ_T0095057.1 MGP_LPJ_G0035357.1 mouse_genomes_project 9 126291293 126297202 - MGP_LPJ_P0095057 1110059G10Rik protein_coding protein_coding MGP_LPJ_T0095058.1 MGP_LPJ_G0035357.1 mouse_genomes_project 9 126293739 126297155 - MGP_LPJ_P0095058 1110059G10Rik protein_coding protein_coding MGP_LPJ_T0090824.1 MGP_LPJ_G0034213.1 mouse_genomes_project 9 2129175 2151474 + MGP_LPJ_P0090824 Casp12 protein_coding protein_coding MGP_LPJ_T0090825.1 MGP_LPJ_G0034213.1 mouse_genomes_project 9 2129221 2151323 + MGP_LPJ_P0090825 Casp12 protein_coding nonsense_mediated_decay MGP_LPJ_T0090826.1 MGP_LPJ_G0034213.1 mouse_genomes_project 9 2129224 2137062 + Casp12 protein_coding retained_intron MGP_LPJ_T0090827.1 MGP_LPJ_G0034213.1 mouse_genomes_project 9 2129241 2138065 + Casp12 protein_coding retained_intron MGP_LPJ_T0090828.1 MGP_LPJ_G0034213.1 mouse_genomes_project 9 2129249 2143283 + MGP_LPJ_P0090828 Casp12 protein_coding protein_coding MGP_LPJ_T0005501.1 MGP_LPJ_G0004651.1 mouse_genomes_project 9 72996213 72997041 - Gm27232 antisense antisense MGP_LPJ_T0018495.1 MGP_LPJ_G0015662.1 mouse_genomes_project 9 73467209 73470258 + 2310009A05Rik processed_transcript antisense MGP_LPJ_T0018496.1 MGP_LPJ_G0015662.1 mouse_genomes_project 9 73467221 73469860 + 2310009A05Rik processed_transcript retained_intron MGP_LPJ_T0098685.1 MGP_LPJ_G0036953.1 mouse_genomes_project 9 27344138 27346165 - Gm15521 sense_intronic sense_intronic MGP_LPJ_T0011091.1 MGP_LPJ_G0009209.1 mouse_genomes_project 9 64163894 64164021 + Gm24106 miRNA miRNA MGP_LPJ_T0093310.1 MGP_LPJ_G0035013.1 mouse_genomes_project 9 91248649 91277061 - Morf4l1 protein_coding retained_intron MGP_LPJ_T0093311.1 MGP_LPJ_G0035013.1 mouse_genomes_project 9 91250628 91277153 - MGP_LPJ_P0093311 Morf4l1 protein_coding unknown_likely_coding MGP_LPJ_T0093312.1 MGP_LPJ_G0035013.1 mouse_genomes_project 9 91250628 91277165 - MGP_LPJ_P0093312 Morf4l1 protein_coding protein_coding MGP_LPJ_T0093313.1 MGP_LPJ_G0035013.1 mouse_genomes_project 9 91250884 91276710 - Morf4l1 protein_coding processed_transcript MGP_LPJ_T0093314.1 MGP_LPJ_G0035013.1 mouse_genomes_project 9 91255880 91257588 - Morf4l1 protein_coding retained_intron MGP_LPJ_T0093315.1 MGP_LPJ_G0035013.1 mouse_genomes_project 9 91258662 91259569 - Morf4l1 protein_coding retained_intron MGP_LPJ_T0093316.1 MGP_LPJ_G0035013.1 mouse_genomes_project 9 91259087 91277080 - MGP_LPJ_P0093316 Morf4l1 protein_coding protein_coding MGP_LPJ_T0093317.1 MGP_LPJ_G0035013.1 mouse_genomes_project 9 91259565 91276950 - Morf4l1 protein_coding processed_transcript MGP_LPJ_T0093318.1 MGP_LPJ_G0035013.1 mouse_genomes_project 9 91259565 91277119 - MGP_LPJ_P0093318 Morf4l1 protein_coding nonsense_mediated_decay MGP_LPJ_T0093319.1 MGP_LPJ_G0035013.1 mouse_genomes_project 9 91264424 91277031 - Morf4l1 protein_coding retained_intron MGP_LPJ_T0093320.1 MGP_LPJ_G0035013.1 mouse_genomes_project 9 91270067 91277004 - Morf4l1 protein_coding retained_intron MGP_LPJ_T0092139.1 MGP_LPJ_G0034723.1 mouse_genomes_project 9 54060476 54071311 - MGP_LPJ_P0092139 protein_coding protein_coding MGP_LPJ_T0090931.1 MGP_LPJ_G0034246.1 mouse_genomes_project 9 11279288 11330855 + MGP_LPJ_P0090931 Sesn3 protein_coding protein_coding MGP_LPJ_T0094483.1 MGP_LPJ_G0035213.1 mouse_genomes_project 9 111216985 111226808 - MGP_LPJ_P0094483 protein_coding protein_coding MGP_LPJ_T0094484.1 MGP_LPJ_G0035213.1 mouse_genomes_project 9 111226493 111226795 - protein_coding retained_intron MGP_LPJ_T0091211.1 MGP_LPJ_G0034368.1 mouse_genomes_project 9 19382424 19387094 - MGP_LPJ_P0091211 Epor protein_coding protein_coding MGP_LPJ_T0090817.1 MGP_LPJ_G0034212.1 mouse_genomes_project 9 2089544 2107641 + MGP_LPJ_P0090817 Casp4 protein_coding protein_coding MGP_LPJ_T0090818.1 MGP_LPJ_G0034212.1 mouse_genomes_project 9 2089565 2120742 + MGP_LPJ_P0090818 Casp4 protein_coding protein_coding MGP_LPJ_T0090819.1 MGP_LPJ_G0034212.1 mouse_genomes_project 9 2089576 2113467 + Casp4 protein_coding retained_intron MGP_LPJ_T0090820.1 MGP_LPJ_G0034212.1 mouse_genomes_project 9 2089576 2112136 + MGP_LPJ_P0090820 Casp4 protein_coding nonsense_mediated_decay MGP_LPJ_T0090821.1 MGP_LPJ_G0034212.1 mouse_genomes_project 9 2089581 2105668 + Casp4 protein_coding retained_intron MGP_LPJ_T0090822.1 MGP_LPJ_G0034212.1 mouse_genomes_project 9 2105326 2120048 + MGP_LPJ_P0090822 Casp4 protein_coding nonsense_mediated_decay MGP_LPJ_T0090823.1 MGP_LPJ_G0034212.1 mouse_genomes_project 9 2107275 2111026 + Casp4 protein_coding retained_intron MGP_LPJ_T0091637.1 MGP_LPJ_G0034562.1 mouse_genomes_project 9 38777340 38830641 - MGP_LPJ_P0091637 Gramd1b protein_coding protein_coding MGP_LPJ_T0091638.1 MGP_LPJ_G0034562.1 mouse_genomes_project 9 38777346 39033249 - MGP_LPJ_P0091638 Gramd1b protein_coding protein_coding MGP_LPJ_T0091639.1 MGP_LPJ_G0034562.1 mouse_genomes_project 9 38777349 38830265 - MGP_LPJ_P0091639 Gramd1b protein_coding protein_coding MGP_LPJ_T0091640.1 MGP_LPJ_G0034562.1 mouse_genomes_project 9 38777352 38949877 - MGP_LPJ_P0091640 Gramd1b protein_coding protein_coding MGP_LPJ_T0091641.1 MGP_LPJ_G0034562.1 mouse_genomes_project 9 38781982 38879216 - MGP_LPJ_P0091641 Gramd1b protein_coding protein_coding MGP_LPJ_T0091642.1 MGP_LPJ_G0034562.1 mouse_genomes_project 9 38782013 38949971 - MGP_LPJ_P0091642 Gramd1b protein_coding protein_coding MGP_LPJ_T0091643.1 MGP_LPJ_G0034562.1 mouse_genomes_project 9 38784132 38791098 - Gramd1b protein_coding retained_intron MGP_LPJ_T0091644.1 MGP_LPJ_G0034562.1 mouse_genomes_project 9 38800826 38817700 - Gramd1b protein_coding retained_intron MGP_LPJ_T0091645.1 MGP_LPJ_G0034562.1 mouse_genomes_project 9 38801590 38879514 - Gramd1b protein_coding processed_transcript MGP_LPJ_T0091646.1 MGP_LPJ_G0034562.1 mouse_genomes_project 9 38801592 38879500 - Gramd1b protein_coding processed_transcript MGP_LPJ_T0091647.1 MGP_LPJ_G0034562.1 mouse_genomes_project 9 38817657 38961704 - Gramd1b protein_coding processed_transcript MGP_LPJ_T0091648.1 MGP_LPJ_G0034562.1 mouse_genomes_project 9 38817670 38961694 - Gramd1b protein_coding processed_transcript MGP_LPJ_T0091649.1 MGP_LPJ_G0034562.1 mouse_genomes_project 9 38817717 38863112 - Gramd1b protein_coding processed_transcript MGP_LPJ_T0099819.1 MGP_LPJ_G0038082.1 mouse_genomes_project 9 43727733 43727851 + Gm26249 snRNA snRNA MGP_LPJ_T0091055.1 MGP_LPJ_G0034315.1 mouse_genomes_project 9 17650065 17687968 - MGP_LPJ_P0091055 Zfp560 protein_coding protein_coding MGP_LPJ_T0091056.1 MGP_LPJ_G0034315.1 mouse_genomes_project 9 17657484 17687968 - Zfp560 protein_coding retained_intron MGP_LPJ_T0018450.1 MGP_LPJ_G0015649.1 mouse_genomes_project 9 18592142 18593182 + Gm16754 processed_transcript retained_intron MGP_LPJ_T0018451.1 MGP_LPJ_G0015649.1 mouse_genomes_project 9 18592142 18601190 + Gm16754 processed_transcript antisense MGP_LPJ_T0018452.1 MGP_LPJ_G0015649.1 mouse_genomes_project 9 18592174 18601599 + Gm16754 processed_transcript antisense MGP_LPJ_T0099826.1 MGP_LPJ_G0038089.1 mouse_genomes_project 9 52077794 52077912 + Gm22242 snRNA snRNA MGP_LPJ_T0015984.1 MGP_LPJ_G0014075.1 mouse_genomes_project 9 29164377 29164755 + processed_pseudogene processed_pseudogene MGP_LPJ_T0094626.1 MGP_LPJ_G0035239.1 mouse_genomes_project 9 112987028 113077225 + MGP_LPJ_P0094626 Setd2 protein_coding protein_coding MGP_LPJ_T0094627.1 MGP_LPJ_G0035239.1 mouse_genomes_project 9 113003169 113077206 + MGP_LPJ_P0094627 Setd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0094628.1 MGP_LPJ_G0035239.1 mouse_genomes_project 9 113006495 113019812 + MGP_LPJ_P0094628 Setd2 protein_coding protein_coding MGP_LPJ_T0094629.1 MGP_LPJ_G0035239.1 mouse_genomes_project 9 113016321 113023142 + Setd2 protein_coding retained_intron MGP_LPJ_T0094630.1 MGP_LPJ_G0035239.1 mouse_genomes_project 9 113016403 113025935 + Setd2 protein_coding retained_intron MGP_LPJ_T0094631.1 MGP_LPJ_G0035239.1 mouse_genomes_project 9 113029204 113077199 + MGP_LPJ_P0094631 Setd2 protein_coding protein_coding MGP_LPJ_T0094632.1 MGP_LPJ_G0035239.1 mouse_genomes_project 9 113029466 113049810 + MGP_LPJ_P0094632 Setd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0094633.1 MGP_LPJ_G0035239.1 mouse_genomes_project 9 113049674 113061622 + Setd2 protein_coding retained_intron MGP_LPJ_T0094634.1 MGP_LPJ_G0035239.1 mouse_genomes_project 9 113058692 113076740 + MGP_LPJ_P0094634 Setd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0094635.1 MGP_LPJ_G0035239.1 mouse_genomes_project 9 113076192 113077199 + Setd2 protein_coding retained_intron MGP_LPJ_T0016095.1 MGP_LPJ_G0014186.1 mouse_genomes_project 9 102296368 102297360 - processed_pseudogene processed_pseudogene MGP_LPJ_T0091437.1 MGP_LPJ_G0034442.1 mouse_genomes_project 9 33840792 33855327 - MGP_LPJ_P0091437 Gm27235 protein_coding nonsense_mediated_decay MGP_LPJ_T0095113.1 MGP_LPJ_G0035378.1 mouse_genomes_project 9 127500309 127517977 + MGP_LPJ_P0095113 Ccr3 protein_coding protein_coding MGP_LPJ_T0011072.1 MGP_LPJ_G0009190.1 mouse_genomes_project 9 30005715 30005841 + Gm44453 miRNA miRNA MGP_LPJ_T0099841.1 MGP_LPJ_G0038104.1 mouse_genomes_project 9 72468537 72468636 - Gm25045 snRNA snRNA MGP_LPJ_T0101072.1 MGP_LPJ_G0039335.1 mouse_genomes_project 9 12397220 12397343 + Gm25500 snoRNA snoRNA MGP_LPJ_T0092197.1 MGP_LPJ_G0034740.1 mouse_genomes_project 9 54959515 55349807 - MGP_LPJ_P0092197 Scaper protein_coding protein_coding MGP_LPJ_T0092198.1 MGP_LPJ_G0034740.1 mouse_genomes_project 9 55167386 55343824 - MGP_LPJ_P0092198 Scaper protein_coding unknown_likely_coding MGP_LPJ_T0092282.1 MGP_LPJ_G0034773.1 mouse_genomes_project 9 57236290 57281145 + MGP_LPJ_P0092282 Edc3 protein_coding protein_coding MGP_LPJ_T0092283.1 MGP_LPJ_G0034773.1 mouse_genomes_project 9 57236305 57280049 + MGP_LPJ_P0092283 Edc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0092284.1 MGP_LPJ_G0034773.1 mouse_genomes_project 9 57236317 57243726 + MGP_LPJ_P0092284 Edc3 protein_coding protein_coding MGP_LPJ_T0091298.1 MGP_LPJ_G0034404.1 mouse_genomes_project 9 24690937 24756087 + MGP_LPJ_P0091298 Ncapd3 protein_coding protein_coding MGP_LPJ_T0011100.1 MGP_LPJ_G0009218.1 mouse_genomes_project 9 72379683 72379759 + Gm27450 miRNA miRNA MGP_LPJ_T0093817.1 MGP_LPJ_G0035113.1 mouse_genomes_project 9 108235510 108239795 + MGP_LPJ_P0093817 Tlr9 protein_coding protein_coding MGP_LPJ_T0015973.1 MGP_LPJ_G0014064.1 mouse_genomes_project 9 11788529 11789057 + processed_pseudogene processed_pseudogene MGP_LPJ_T0092192.1 MGP_LPJ_G0034739.1 mouse_genomes_project 9 54948236 54952135 + MGP_LPJ_P0092192 Isl2 protein_coding protein_coding MGP_LPJ_T0092193.1 MGP_LPJ_G0034739.1 mouse_genomes_project 9 54950712 54955786 + MGP_LPJ_P0092193 Isl2 protein_coding protein_coding MGP_LPJ_T0092194.1 MGP_LPJ_G0034739.1 mouse_genomes_project 9 54950771 54955786 + MGP_LPJ_P0092194 Isl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0092195.1 MGP_LPJ_G0034739.1 mouse_genomes_project 9 54950771 54955784 + MGP_LPJ_P0092195 Isl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0092196.1 MGP_LPJ_G0034739.1 mouse_genomes_project 9 54951900 54953845 + Isl2 protein_coding retained_intron MGP_LPJ_T0091443.1 MGP_LPJ_G0034447.1 mouse_genomes_project 9 34252538 34260051 - MGP_LPJ_P0091443 protein_coding protein_coding MGP_LPJ_T0091288.1 MGP_LPJ_G0034400.1 mouse_genomes_project 9 24535454 24574516 - MGP_LPJ_P0091288 Gm1110 protein_coding protein_coding MGP_LPJ_T0092566.1 MGP_LPJ_G0034841.1 mouse_genomes_project 9 64897599 64926342 - MGP_LPJ_P0092566 Slc24a1 protein_coding protein_coding MGP_LPJ_T0094614.1 MGP_LPJ_G0035236.1 mouse_genomes_project 9 112862502 112865763 + MGP_LPJ_P0094614 Ngp protein_coding protein_coding MGP_LPJ_T0092567.1 MGP_LPJ_G0034842.1 mouse_genomes_project 9 64935568 64963597 + MGP_LPJ_P0092567 Vwa9 protein_coding protein_coding MGP_LPJ_T0092568.1 MGP_LPJ_G0034842.1 mouse_genomes_project 9 64935673 64963597 + MGP_LPJ_P0092568 Vwa9 protein_coding protein_coding MGP_LPJ_T0101141.1 MGP_LPJ_G0039404.1 mouse_genomes_project 9 116449135 116449252 - Gm25059 snoRNA snoRNA MGP_LPJ_T0005484.1 MGP_LPJ_G0004639.1 mouse_genomes_project 9 57670641 57671816 + Gm16131 antisense antisense MGP_LPJ_T0093881.1 MGP_LPJ_G0035123.1 mouse_genomes_project 9 108507471 108514404 + Rrp9 protein_coding processed_transcript MGP_LPJ_T0093882.1 MGP_LPJ_G0035123.1 mouse_genomes_project 9 108508777 108517954 + MGP_LPJ_P0093882 Rrp9 protein_coding protein_coding MGP_LPJ_T0093883.1 MGP_LPJ_G0035123.1 mouse_genomes_project 9 108508826 108517946 + Rrp9 protein_coding retained_intron MGP_LPJ_T0093884.1 MGP_LPJ_G0035123.1 mouse_genomes_project 9 108508838 108509499 + Rrp9 protein_coding retained_intron MGP_LPJ_T0093885.1 MGP_LPJ_G0035123.1 mouse_genomes_project 9 108512369 108513213 + Rrp9 protein_coding retained_intron MGP_LPJ_T0093886.1 MGP_LPJ_G0035123.1 mouse_genomes_project 9 108516383 108517952 + MGP_LPJ_P0093886 Rrp9 protein_coding nonsense_mediated_decay MGP_LPJ_T0093887.1 MGP_LPJ_G0035123.1 mouse_genomes_project 9 108516993 108517954 + Rrp9 protein_coding retained_intron MGP_LPJ_T0002442.1 MGP_LPJ_G0002348.1 mouse_genomes_project 9 96771851 96772943 + TEC TEC MGP_LPJ_T0005544.1 MGP_LPJ_G0004680.1 mouse_genomes_project 9 107280295 107288019 + antisense antisense MGP_LPJ_T0094486.1 MGP_LPJ_G0035215.1 mouse_genomes_project 9 111241731 111269083 + MGP_LPJ_P0094486 Plxnb1 protein_coding protein_coding MGP_LPJ_T0094487.1 MGP_LPJ_G0035215.1 mouse_genomes_project 9 111242294 111246842 + MGP_LPJ_P0094487 Plxnb1 protein_coding protein_coding MGP_LPJ_T0094488.1 MGP_LPJ_G0035215.1 mouse_genomes_project 9 111243052 111246842 + MGP_LPJ_P0094488 Plxnb1 protein_coding protein_coding MGP_LPJ_T0094489.1 MGP_LPJ_G0035215.1 mouse_genomes_project 9 111252675 111258047 + MGP_LPJ_P0094489 Plxnb1 protein_coding protein_coding MGP_LPJ_T0094490.1 MGP_LPJ_G0035215.1 mouse_genomes_project 9 111253224 111254531 + Plxnb1 protein_coding retained_intron MGP_LPJ_T0094491.1 MGP_LPJ_G0035215.1 mouse_genomes_project 9 111253686 111254655 + Plxnb1 protein_coding retained_intron MGP_LPJ_T0094492.1 MGP_LPJ_G0035215.1 mouse_genomes_project 9 111254517 111258076 + Plxnb1 protein_coding retained_intron MGP_LPJ_T0002407.1 MGP_LPJ_G0002314.1 mouse_genomes_project 9 73401294 73402568 - TEC TEC MGP_LPJ_T0092738.1 MGP_LPJ_G0034889.1 mouse_genomes_project 9 70269806 70288678 + MGP_LPJ_P0092738 Bnip2 protein_coding protein_coding MGP_LPJ_T0092739.1 MGP_LPJ_G0034889.1 mouse_genomes_project 9 70269844 70288616 + MGP_LPJ_P0092739 Bnip2 protein_coding protein_coding MGP_LPJ_T0092740.1 MGP_LPJ_G0034889.1 mouse_genomes_project 9 70269855 70284345 + MGP_LPJ_P0092740 Bnip2 protein_coding protein_coding MGP_LPJ_T0092741.1 MGP_LPJ_G0034889.1 mouse_genomes_project 9 70269857 70279496 + MGP_LPJ_P0092741 Bnip2 protein_coding nonsense_mediated_decay MGP_LPJ_T0092742.1 MGP_LPJ_G0034889.1 mouse_genomes_project 9 70275819 70287476 + MGP_LPJ_P0092742 Bnip2 protein_coding protein_coding MGP_LPJ_T0092743.1 MGP_LPJ_G0034889.1 mouse_genomes_project 9 70277513 70282576 + Bnip2 protein_coding retained_intron MGP_LPJ_T0092744.1 MGP_LPJ_G0034889.1 mouse_genomes_project 9 70278569 70283975 + Bnip2 protein_coding processed_transcript MGP_LPJ_T0092745.1 MGP_LPJ_G0034889.1 mouse_genomes_project 9 70283716 70285101 + MGP_LPJ_P0092745 Bnip2 protein_coding protein_coding MGP_LPJ_T0094130.1 MGP_LPJ_G0035162.1 mouse_genomes_project 9 110045983 110060055 + MGP_LPJ_P0094130 Camkv protein_coding protein_coding MGP_LPJ_T0094131.1 MGP_LPJ_G0035162.1 mouse_genomes_project 9 110046207 110060041 + Camkv protein_coding retained_intron MGP_LPJ_T0094132.1 MGP_LPJ_G0035162.1 mouse_genomes_project 9 110046217 110056552 + MGP_LPJ_P0094132 Camkv protein_coding nonsense_mediated_decay MGP_LPJ_T0094133.1 MGP_LPJ_G0035162.1 mouse_genomes_project 9 110047609 110055901 + MGP_LPJ_P0094133 Camkv protein_coding protein_coding MGP_LPJ_T0094134.1 MGP_LPJ_G0035162.1 mouse_genomes_project 9 110055622 110060047 + MGP_LPJ_P0094134 Camkv protein_coding protein_coding MGP_LPJ_T0016123.1 MGP_LPJ_G0014214.1 mouse_genomes_project 9 120017647 120018009 + processed_pseudogene processed_pseudogene MGP_LPJ_T0094750.1 MGP_LPJ_G0035263.1 mouse_genomes_project 9 113951710 114005771 + MGP_LPJ_P0094750 Dclk3 protein_coding protein_coding MGP_LPJ_T0091431.1 MGP_LPJ_G0034439.1 mouse_genomes_project 9 33706623 33709683 - MGP_LPJ_P0091431 Pate3 protein_coding protein_coding MGP_LPJ_T0091254.1 MGP_LPJ_G0034388.1 mouse_genomes_project 9 20755259 21022280 + MGP_LPJ_P0091254 Bmper protein_coding protein_coding MGP_LPJ_T0090907.1 MGP_LPJ_G0034243.1 mouse_genomes_project 9 10733324 10791145 + MGP_LPJ_P0090907 Mtmr2 protein_coding protein_coding MGP_LPJ_T0090908.1 MGP_LPJ_G0034243.1 mouse_genomes_project 9 10734095 10791145 + MGP_LPJ_P0090908 Mtmr2 protein_coding protein_coding MGP_LPJ_T0090909.1 MGP_LPJ_G0034243.1 mouse_genomes_project 9 10734099 10765544 + Mtmr2 protein_coding processed_transcript MGP_LPJ_T0090910.1 MGP_LPJ_G0034243.1 mouse_genomes_project 9 10734111 10791145 + MGP_LPJ_P0090910 Mtmr2 protein_coding nonsense_mediated_decay MGP_LPJ_T0090911.1 MGP_LPJ_G0034243.1 mouse_genomes_project 9 10734233 10768058 + MGP_LPJ_P0090911 Mtmr2 protein_coding protein_coding MGP_LPJ_T0090912.1 MGP_LPJ_G0034243.1 mouse_genomes_project 9 10734303 10768058 + MGP_LPJ_P0090912 Mtmr2 protein_coding protein_coding MGP_LPJ_T0090913.1 MGP_LPJ_G0034243.1 mouse_genomes_project 9 10746984 10775287 + MGP_LPJ_P0090913 Mtmr2 protein_coding protein_coding MGP_LPJ_T0090914.1 MGP_LPJ_G0034243.1 mouse_genomes_project 9 10747747 10768056 + Mtmr2 protein_coding processed_transcript MGP_LPJ_T0090915.1 MGP_LPJ_G0034243.1 mouse_genomes_project 9 10779220 10791144 + Mtmr2 protein_coding retained_intron MGP_LPJ_T0093760.1 MGP_LPJ_G0035104.1 mouse_genomes_project 9 107351760 107411492 - MGP_LPJ_P0093760 Atp2c1 protein_coding nonsense_mediated_decay MGP_LPJ_T0093761.1 MGP_LPJ_G0035104.1 mouse_genomes_project 9 107351760 107472123 - MGP_LPJ_P0093761 Atp2c1 protein_coding protein_coding MGP_LPJ_T0093762.1 MGP_LPJ_G0035104.1 mouse_genomes_project 9 107351767 107445608 - MGP_LPJ_P0093762 Atp2c1 protein_coding protein_coding MGP_LPJ_T0093763.1 MGP_LPJ_G0035104.1 mouse_genomes_project 9 107357548 107446285 - MGP_LPJ_P0093763 Atp2c1 protein_coding protein_coding MGP_LPJ_T0093764.1 MGP_LPJ_G0035104.1 mouse_genomes_project 9 107357928 107446324 - MGP_LPJ_P0093764 Atp2c1 protein_coding protein_coding MGP_LPJ_T0093765.1 MGP_LPJ_G0035104.1 mouse_genomes_project 9 107357929 107472233 - MGP_LPJ_P0093765 Atp2c1 protein_coding protein_coding MGP_LPJ_T0093766.1 MGP_LPJ_G0035104.1 mouse_genomes_project 9 107359491 107387423 - Atp2c1 protein_coding processed_transcript MGP_LPJ_T0093767.1 MGP_LPJ_G0035104.1 mouse_genomes_project 9 107361278 107366223 - Atp2c1 protein_coding retained_intron MGP_LPJ_T0093768.1 MGP_LPJ_G0035104.1 mouse_genomes_project 9 107368039 107383575 - Atp2c1 protein_coding retained_intron MGP_LPJ_T0093769.1 MGP_LPJ_G0035104.1 mouse_genomes_project 9 107371664 107446268 - MGP_LPJ_P0093769 Atp2c1 protein_coding protein_coding MGP_LPJ_T0093770.1 MGP_LPJ_G0035104.1 mouse_genomes_project 9 107386025 107392990 - Atp2c1 protein_coding retained_intron MGP_LPJ_T0093771.1 MGP_LPJ_G0035104.1 mouse_genomes_project 9 107395707 107445650 - Atp2c1 protein_coding processed_transcript MGP_LPJ_T0093772.1 MGP_LPJ_G0035104.1 mouse_genomes_project 9 107402680 107421603 - MGP_LPJ_P0093772 Atp2c1 protein_coding protein_coding MGP_LPJ_T0093773.1 MGP_LPJ_G0035104.1 mouse_genomes_project 9 107403650 107446238 - MGP_LPJ_P0093773 Atp2c1 protein_coding protein_coding MGP_LPJ_T0093774.1 MGP_LPJ_G0035104.1 mouse_genomes_project 9 107404314 107446686 - Atp2c1 protein_coding retained_intron MGP_LPJ_T0093775.1 MGP_LPJ_G0035104.1 mouse_genomes_project 9 107404370 107445801 - MGP_LPJ_P0093775 Atp2c1 protein_coding protein_coding MGP_LPJ_T0093776.1 MGP_LPJ_G0035104.1 mouse_genomes_project 9 107410099 107478306 - Atp2c1 protein_coding processed_transcript MGP_LPJ_T0093777.1 MGP_LPJ_G0035104.1 mouse_genomes_project 9 107410099 107446674 - MGP_LPJ_P0093777 Atp2c1 protein_coding protein_coding MGP_LPJ_T0093778.1 MGP_LPJ_G0035104.1 mouse_genomes_project 9 107411478 107446296 - MGP_LPJ_P0093778 Atp2c1 protein_coding protein_coding MGP_LPJ_T0093779.1 MGP_LPJ_G0035104.1 mouse_genomes_project 9 107415892 107445855 - MGP_LPJ_P0093779 Atp2c1 protein_coding protein_coding MGP_LPJ_T0093780.1 MGP_LPJ_G0035104.1 mouse_genomes_project 9 107420315 107446296 - Atp2c1 protein_coding retained_intron MGP_LPJ_T0093781.1 MGP_LPJ_G0035104.1 mouse_genomes_project 9 107470977 107472390 - Atp2c1 protein_coding retained_intron MGP_LPJ_T0091616.1 MGP_LPJ_G0034546.1 mouse_genomes_project 9 38352038 38352962 + MGP_LPJ_P0091616 Olfr229 protein_coding protein_coding MGP_LPJ_T0005438.1 MGP_LPJ_G0004610.1 mouse_genomes_project 9 11756978 11771393 + Gm10706 antisense antisense MGP_LPJ_T0099840.1 MGP_LPJ_G0038103.1 mouse_genomes_project 9 70860753 70860861 + Gm22229 snRNA snRNA MGP_LPJ_T0002418.1 MGP_LPJ_G0002325.1 mouse_genomes_project 9 83976960 83979765 + TEC TEC MGP_LPJ_T0092937.1 MGP_LPJ_G0034928.1 mouse_genomes_project 9 75572273 75596781 + MGP_LPJ_P0092937 Arpp19 protein_coding protein_coding MGP_LPJ_T0092938.1 MGP_LPJ_G0034928.1 mouse_genomes_project 9 75572273 75596762 + MGP_LPJ_P0092938 Arpp19 protein_coding protein_coding MGP_LPJ_T0092939.1 MGP_LPJ_G0034928.1 mouse_genomes_project 9 75572336 75573133 + Arpp19 protein_coding retained_intron MGP_LPJ_T0092940.1 MGP_LPJ_G0034928.1 mouse_genomes_project 9 75572336 75593306 + MGP_LPJ_P0092940 Arpp19 protein_coding protein_coding MGP_LPJ_T0092941.1 MGP_LPJ_G0034928.1 mouse_genomes_project 9 75572338 75594178 + MGP_LPJ_P0092941 Arpp19 protein_coding nonsense_mediated_decay MGP_LPJ_T0092942.1 MGP_LPJ_G0034928.1 mouse_genomes_project 9 75572377 75596781 + MGP_LPJ_P0092942 Arpp19 protein_coding protein_coding MGP_LPJ_T0092943.1 MGP_LPJ_G0034928.1 mouse_genomes_project 9 75572408 75593361 + MGP_LPJ_P0092943 Arpp19 protein_coding protein_coding MGP_LPJ_T0092944.1 MGP_LPJ_G0034928.1 mouse_genomes_project 9 75572478 75593290 + MGP_LPJ_P0092944 Arpp19 protein_coding protein_coding MGP_LPJ_T0092945.1 MGP_LPJ_G0034928.1 mouse_genomes_project 9 75572576 75593273 + MGP_LPJ_P0092945 Arpp19 protein_coding protein_coding MGP_LPJ_T0092946.1 MGP_LPJ_G0034928.1 mouse_genomes_project 9 75588461 75593851 + MGP_LPJ_P0092946 Arpp19 protein_coding protein_coding MGP_LPJ_T0092947.1 MGP_LPJ_G0034928.1 mouse_genomes_project 9 75588535 75594544 + MGP_LPJ_P0092947 Arpp19 protein_coding protein_coding MGP_LPJ_T0091484.1 MGP_LPJ_G0034457.1 mouse_genomes_project 9 35056219 35262661 - MGP_LPJ_P0091484 Pknox2 protein_coding protein_coding MGP_LPJ_T0091485.1 MGP_LPJ_G0034457.1 mouse_genomes_project 9 35056219 35329538 - MGP_LPJ_P0091485 Pknox2 protein_coding protein_coding MGP_LPJ_T0091486.1 MGP_LPJ_G0034457.1 mouse_genomes_project 9 35056222 35329563 - MGP_LPJ_P0091486 Pknox2 protein_coding protein_coding MGP_LPJ_T0091487.1 MGP_LPJ_G0034457.1 mouse_genomes_project 9 35057715 35141690 - MGP_LPJ_P0091487 Pknox2 protein_coding nonsense_mediated_decay MGP_LPJ_T0091488.1 MGP_LPJ_G0034457.1 mouse_genomes_project 9 35057879 35262631 - Pknox2 protein_coding processed_transcript MGP_LPJ_T0091489.1 MGP_LPJ_G0034457.1 mouse_genomes_project 9 35092478 35262631 - Pknox2 protein_coding retained_intron MGP_LPJ_T0091490.1 MGP_LPJ_G0034457.1 mouse_genomes_project 9 35104700 35262631 - Pknox2 protein_coding retained_intron MGP_LPJ_T0091491.1 MGP_LPJ_G0034457.1 mouse_genomes_project 9 35106467 35262631 - MGP_LPJ_P0091491 Pknox2 protein_coding protein_coding MGP_LPJ_T0091492.1 MGP_LPJ_G0034457.1 mouse_genomes_project 9 35106480 35319492 - MGP_LPJ_P0091492 Pknox2 protein_coding protein_coding MGP_LPJ_T0091493.1 MGP_LPJ_G0034457.1 mouse_genomes_project 9 35106496 35329571 - MGP_LPJ_P0091493 Pknox2 protein_coding protein_coding MGP_LPJ_T0091494.1 MGP_LPJ_G0034457.1 mouse_genomes_project 9 35128305 35327901 - MGP_LPJ_P0091494 Pknox2 protein_coding protein_coding MGP_LPJ_T0091495.1 MGP_LPJ_G0034457.1 mouse_genomes_project 9 35164326 35329515 - Pknox2 protein_coding processed_transcript MGP_LPJ_T0094425.1 MGP_LPJ_G0035205.1 mouse_genomes_project 9 111069069 111084832 + MGP_LPJ_P0094425 Uqcrc1 protein_coding protein_coding MGP_LPJ_T0094426.1 MGP_LPJ_G0035205.1 mouse_genomes_project 9 111069150 111080108 + MGP_LPJ_P0094426 Uqcrc1 protein_coding protein_coding MGP_LPJ_T0094427.1 MGP_LPJ_G0035205.1 mouse_genomes_project 9 111069151 111079924 + MGP_LPJ_P0094427 Uqcrc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0094428.1 MGP_LPJ_G0035205.1 mouse_genomes_project 9 111069328 111079643 + Uqcrc1 protein_coding retained_intron MGP_LPJ_T0094429.1 MGP_LPJ_G0035205.1 mouse_genomes_project 9 111075419 111080230 + MGP_LPJ_P0094429 Uqcrc1 protein_coding protein_coding MGP_LPJ_T0094430.1 MGP_LPJ_G0035205.1 mouse_genomes_project 9 111081373 111084828 + Uqcrc1 protein_coding retained_intron MGP_LPJ_T0094431.1 MGP_LPJ_G0035205.1 mouse_genomes_project 9 111082625 111084749 + MGP_LPJ_P0094431 Uqcrc1 protein_coding protein_coding MGP_LPJ_T0094432.1 MGP_LPJ_G0035205.1 mouse_genomes_project 9 111083519 111084321 + Uqcrc1 protein_coding retained_intron MGP_LPJ_T0094923.1 MGP_LPJ_G0035310.1 mouse_genomes_project 9 122562308 122581992 + MGP_LPJ_P0094923 Exog protein_coding protein_coding MGP_LPJ_T0011066.1 MGP_LPJ_G0009184.1 mouse_genomes_project 9 18431343 18431435 - Mir7082 miRNA miRNA MGP_LPJ_T0094692.1 MGP_LPJ_G0035253.1 mouse_genomes_project 9 113400222 113402397 - MGP_LPJ_P0094692 Gm590 protein_coding protein_coding MGP_LPJ_T0090972.1 MGP_LPJ_G0034263.1 mouse_genomes_project 9 12390866 12396773 + MGP_LPJ_P0090972 Taf1d protein_coding protein_coding MGP_LPJ_T0090973.1 MGP_LPJ_G0034263.1 mouse_genomes_project 9 12390866 12396773 + MGP_LPJ_P0090973 Taf1d protein_coding protein_coding MGP_LPJ_T0094834.1 MGP_LPJ_G0035289.1 mouse_genomes_project 9 118985525 119079212 - MGP_LPJ_P0094834 Tgfbr2 protein_coding protein_coding MGP_LPJ_T0094835.1 MGP_LPJ_G0035289.1 mouse_genomes_project 9 118985525 119079212 - MGP_LPJ_P0094835 Tgfbr2 protein_coding protein_coding MGP_LPJ_T0092149.1 MGP_LPJ_G0034728.1 mouse_genomes_project 9 54297011 54330021 + MGP_LPJ_P0092149 Hykk protein_coding protein_coding MGP_LPJ_T0092150.1 MGP_LPJ_G0034728.1 mouse_genomes_project 9 54297039 54310814 + Hykk protein_coding retained_intron MGP_LPJ_T0092151.1 MGP_LPJ_G0034728.1 mouse_genomes_project 9 54297040 54318128 + Hykk protein_coding retained_intron MGP_LPJ_T0092152.1 MGP_LPJ_G0034728.1 mouse_genomes_project 9 54297075 54298973 + Hykk protein_coding processed_transcript MGP_LPJ_T0016101.1 MGP_LPJ_G0014192.1 mouse_genomes_project 9 104320597 104322098 + processed_pseudogene processed_pseudogene MGP_LPJ_T0095080.1 MGP_LPJ_G0035364.1 mouse_genomes_project 9 126531614 126574704 - MGP_LPJ_P0095080 Cdcp1 protein_coding protein_coding MGP_LPJ_T0095081.1 MGP_LPJ_G0035364.1 mouse_genomes_project 9 126533847 126538843 - Cdcp1 protein_coding retained_intron MGP_LPJ_T0095082.1 MGP_LPJ_G0035364.1 mouse_genomes_project 9 126541418 126574665 - Cdcp1 protein_coding retained_intron MGP_LPJ_T0093546.1 MGP_LPJ_G0035063.1 mouse_genomes_project 9 101255757 101264030 + MGP_LPJ_P0093546 Dzip1l protein_coding protein_coding MGP_LPJ_T0093547.1 MGP_LPJ_G0035063.1 mouse_genomes_project 9 101255803 101301276 + MGP_LPJ_P0093547 Dzip1l protein_coding protein_coding MGP_LPJ_T0093548.1 MGP_LPJ_G0035063.1 mouse_genomes_project 9 101255839 101301276 + MGP_LPJ_P0093548 Dzip1l protein_coding protein_coding MGP_LPJ_T0093549.1 MGP_LPJ_G0035063.1 mouse_genomes_project 9 101256104 101301276 + MGP_LPJ_P0093549 Dzip1l protein_coding protein_coding MGP_LPJ_T0093550.1 MGP_LPJ_G0035063.1 mouse_genomes_project 9 101261099 101301184 + MGP_LPJ_P0093550 Dzip1l protein_coding protein_coding MGP_LPJ_T0093551.1 MGP_LPJ_G0035063.1 mouse_genomes_project 9 101275032 101281896 + Dzip1l protein_coding processed_transcript MGP_LPJ_T0093552.1 MGP_LPJ_G0035063.1 mouse_genomes_project 9 101281175 101284645 + Dzip1l protein_coding retained_intron MGP_LPJ_T0011084.1 MGP_LPJ_G0009202.1 mouse_genomes_project 9 51407978 51408069 - Gm27686 miRNA miRNA MGP_LPJ_T0091696.1 MGP_LPJ_G0034582.1 mouse_genomes_project 9 42560130 42562686 + MGP_LPJ_P0091696 Gm3898 protein_coding protein_coding MGP_LPJ_T0009264.1 MGP_LPJ_G0007445.1 mouse_genomes_project 9 57544592 57554401 + Gm17322 lincRNA lincRNA MGP_LPJ_T0090950.1 MGP_LPJ_G0034255.1 mouse_genomes_project 9 11839968 11889400 + MGP_LPJ_P0090950 Mre11a protein_coding protein_coding MGP_LPJ_T0090951.1 MGP_LPJ_G0034255.1 mouse_genomes_project 9 11839990 11891877 + MGP_LPJ_P0090951 Mre11a protein_coding protein_coding MGP_LPJ_T0090952.1 MGP_LPJ_G0034255.1 mouse_genomes_project 9 11840016 11854956 + MGP_LPJ_P0090952 Mre11a protein_coding protein_coding MGP_LPJ_T0090953.1 MGP_LPJ_G0034255.1 mouse_genomes_project 9 11852485 11867198 + MGP_LPJ_P0090953 Mre11a protein_coding protein_coding MGP_LPJ_T0090954.1 MGP_LPJ_G0034255.1 mouse_genomes_project 9 11852498 11859189 + MGP_LPJ_P0090954 Mre11a protein_coding protein_coding MGP_LPJ_T0011096.1 MGP_LPJ_G0009214.1 mouse_genomes_project 9 67912860 67912939 - Mir7242 miRNA miRNA MGP_LPJ_T0099814.1 MGP_LPJ_G0038077.1 mouse_genomes_project 9 33528111 33528273 + Gm25630 snRNA snRNA MGP_LPJ_T0091521.1 MGP_LPJ_G0034468.1 mouse_genomes_project 9 35781879 35791940 - MGP_LPJ_P0091521 Spa17 protein_coding unknown_likely_coding MGP_LPJ_T0092398.1 MGP_LPJ_G0034803.1 mouse_genomes_project 9 59417288 59611911 + MGP_LPJ_P0092398 Myo9a protein_coding protein_coding MGP_LPJ_T0092399.1 MGP_LPJ_G0034803.1 mouse_genomes_project 9 59417288 59611911 + MGP_LPJ_P0092399 Myo9a protein_coding protein_coding MGP_LPJ_T0092400.1 MGP_LPJ_G0034803.1 mouse_genomes_project 9 59417288 59611911 + MGP_LPJ_P0092400 Myo9a protein_coding protein_coding MGP_LPJ_T0092401.1 MGP_LPJ_G0034803.1 mouse_genomes_project 9 59544495 59559947 + Myo9a protein_coding processed_transcript MGP_LPJ_T0092402.1 MGP_LPJ_G0034803.1 mouse_genomes_project 9 59574935 59584679 + Myo9a protein_coding retained_intron MGP_LPJ_T0092403.1 MGP_LPJ_G0034803.1 mouse_genomes_project 9 59584251 59592089 + Myo9a protein_coding retained_intron MGP_LPJ_T0092404.1 MGP_LPJ_G0034803.1 mouse_genomes_project 9 59585504 59594012 + Myo9a protein_coding retained_intron MGP_LPJ_T0092405.1 MGP_LPJ_G0034803.1 mouse_genomes_project 9 59591336 59592379 + Myo9a protein_coding retained_intron MGP_LPJ_T0009334.1 MGP_LPJ_G0007500.1 mouse_genomes_project 9 104107578 104116364 + Gm26846 lincRNA lincRNA MGP_LPJ_T0092080.1 MGP_LPJ_G0034699.1 mouse_genomes_project 9 51349190 51391862 + MGP_LPJ_P0092080 Rdx protein_coding protein_coding MGP_LPJ_T0092081.1 MGP_LPJ_G0034699.1 mouse_genomes_project 9 51349979 51391862 + MGP_LPJ_P0092081 Rdx protein_coding protein_coding MGP_LPJ_T0092082.1 MGP_LPJ_G0034699.1 mouse_genomes_project 9 51349979 51378316 + MGP_LPJ_P0092082 Rdx protein_coding protein_coding MGP_LPJ_T0094932.1 MGP_LPJ_G0035315.1 mouse_genomes_project 9 123070681 123082582 - MGP_LPJ_P0094932 Gorasp1 protein_coding protein_coding MGP_LPJ_T0091040.1 MGP_LPJ_G0034300.1 mouse_genomes_project 9 17029924 17069201 + MGP_LPJ_P0091040 protein_coding protein_coding MGP_LPJ_T0011053.1 MGP_LPJ_G0009171.1 mouse_genomes_project 9 1133950 1134017 - Gm23992 miRNA miRNA MGP_LPJ_T0018449.1 MGP_LPJ_G0015648.1 mouse_genomes_project 9 12417008 12421781 + Gm16568 processed_transcript processed_transcript MGP_LPJ_T0091650.1 MGP_LPJ_G0034563.1 mouse_genomes_project 9 39181524 39181926 + MGP_LPJ_P0091650 Gm21915 protein_coding protein_coding MGP_LPJ_T0094581.1 MGP_LPJ_G0035231.1 mouse_genomes_project 9 112543122 112573605 + MGP_LPJ_P0094581 Smarcc1 protein_coding protein_coding MGP_LPJ_T0094582.1 MGP_LPJ_G0035231.1 mouse_genomes_project 9 112557771 112677433 + MGP_LPJ_P0094582 Smarcc1 protein_coding protein_coding MGP_LPJ_T0094583.1 MGP_LPJ_G0035231.1 mouse_genomes_project 9 112557828 112648610 + Smarcc1 protein_coding retained_intron MGP_LPJ_T0094584.1 MGP_LPJ_G0035231.1 mouse_genomes_project 9 112557828 112619104 + MGP_LPJ_P0094584 Smarcc1 protein_coding protein_coding MGP_LPJ_T0094585.1 MGP_LPJ_G0035231.1 mouse_genomes_project 9 112557828 112671590 + MGP_LPJ_P0094585 Smarcc1 protein_coding protein_coding MGP_LPJ_T0094586.1 MGP_LPJ_G0035231.1 mouse_genomes_project 9 112557828 112677433 + MGP_LPJ_P0094586 Smarcc1 protein_coding protein_coding MGP_LPJ_T0094587.1 MGP_LPJ_G0035231.1 mouse_genomes_project 9 112620532 112640898 + Smarcc1 protein_coding retained_intron MGP_LPJ_T0094588.1 MGP_LPJ_G0035231.1 mouse_genomes_project 9 112671206 112673694 + MGP_LPJ_P0094588 Smarcc1 protein_coding protein_coding MGP_LPJ_T0094589.1 MGP_LPJ_G0035231.1 mouse_genomes_project 9 112672687 112673685 + Smarcc1 protein_coding retained_intron MGP_LPJ_T0091152.1 MGP_LPJ_G0034348.1 mouse_genomes_project 9 18693860 18727894 + MGP_LPJ_P0091152 Slc44a2 protein_coding unknown_likely_coding MGP_LPJ_T0091153.1 MGP_LPJ_G0034348.1 mouse_genomes_project 9 18710694 18727887 + MGP_LPJ_P0091153 Slc44a2 protein_coding protein_coding MGP_LPJ_T0093831.1 MGP_LPJ_G0035116.1 mouse_genomes_project 9 108388182 108395954 + MGP_LPJ_P0093831 Dusp7 protein_coding protein_coding MGP_LPJ_T0093832.1 MGP_LPJ_G0035116.1 mouse_genomes_project 9 108389159 108390416 + Dusp7 protein_coding processed_transcript MGP_LPJ_T0093833.1 MGP_LPJ_G0035116.1 mouse_genomes_project 9 108390284 108393405 + MGP_LPJ_P0093833 Dusp7 protein_coding protein_coding MGP_LPJ_T0093834.1 MGP_LPJ_G0035116.1 mouse_genomes_project 9 108394179 108395951 + Dusp7 protein_coding processed_transcript MGP_LPJ_T0092297.1 MGP_LPJ_G0034777.1 mouse_genomes_project 9 57486869 57509514 + MGP_LPJ_P0092297 Sema7a protein_coding protein_coding MGP_LPJ_T0091194.1 MGP_LPJ_G0034360.1 mouse_genomes_project 9 19158250 19194456 - MGP_LPJ_P0091194 Kank2 protein_coding protein_coding MGP_LPJ_T0093246.1 MGP_LPJ_G0034998.1 mouse_genomes_project 9 88799127 88828309 - MGP_LPJ_P0093246 Tbx18 protein_coding protein_coding MGP_LPJ_T0093247.1 MGP_LPJ_G0034998.1 mouse_genomes_project 9 88821434 88827545 - Tbx18 protein_coding processed_transcript MGP_LPJ_T0093740.1 MGP_LPJ_G0035100.1 mouse_genomes_project 9 107065138 107067770 - MGP_LPJ_P0093740 Nudt16 protein_coding protein_coding MGP_LPJ_T0093741.1 MGP_LPJ_G0035100.1 mouse_genomes_project 9 107065675 107068263 - MGP_LPJ_P0093741 Nudt16 protein_coding protein_coding MGP_LPJ_T0093742.1 MGP_LPJ_G0035100.1 mouse_genomes_project 9 107066130 107068238 - Nudt16 protein_coding retained_intron MGP_LPJ_T0093743.1 MGP_LPJ_G0035100.1 mouse_genomes_project 9 107066130 107068238 - Nudt16 protein_coding retained_intron MGP_LPJ_T0093744.1 MGP_LPJ_G0035100.1 mouse_genomes_project 9 107066664 107068231 - MGP_LPJ_P0093744 Nudt16 protein_coding protein_coding MGP_LPJ_T0091626.1 MGP_LPJ_G0034556.1 mouse_genomes_project 9 38577646 38578591 - MGP_LPJ_P0091626 Olfr984 protein_coding protein_coding MGP_LPJ_T0093082.1 MGP_LPJ_G0034969.1 mouse_genomes_project 9 80563947 80594783 - MGP_LPJ_P0093082 Tmem30a protein_coding protein_coding MGP_LPJ_T0093083.1 MGP_LPJ_G0034969.1 mouse_genomes_project 9 80563947 80594860 - MGP_LPJ_P0093083 Tmem30a protein_coding protein_coding MGP_LPJ_T0093084.1 MGP_LPJ_G0034969.1 mouse_genomes_project 9 80567529 80594783 - Tmem30a protein_coding retained_intron MGP_LPJ_T0093085.1 MGP_LPJ_G0034969.1 mouse_genomes_project 9 80571941 80594783 - Tmem30a protein_coding retained_intron MGP_LPJ_T0011077.1 MGP_LPJ_G0009195.1 mouse_genomes_project 9 43118262 43118403 - Gm44335 miRNA miRNA MGP_LPJ_T0092134.1 MGP_LPJ_G0034722.1 mouse_genomes_project 9 53966073 54026524 - MGP_LPJ_P0092134 Acsbg1 protein_coding protein_coding MGP_LPJ_T0092135.1 MGP_LPJ_G0034722.1 mouse_genomes_project 9 53990962 54007546 - MGP_LPJ_P0092135 Acsbg1 protein_coding protein_coding MGP_LPJ_T0092136.1 MGP_LPJ_G0034722.1 mouse_genomes_project 9 53990988 54011733 - MGP_LPJ_P0092136 Acsbg1 protein_coding protein_coding MGP_LPJ_T0092137.1 MGP_LPJ_G0034722.1 mouse_genomes_project 9 53991008 54026349 - MGP_LPJ_P0092137 Acsbg1 protein_coding protein_coding MGP_LPJ_T0092138.1 MGP_LPJ_G0034722.1 mouse_genomes_project 9 54010569 54011604 - Acsbg1 protein_coding retained_intron MGP_LPJ_T0002443.1 MGP_LPJ_G0002349.1 mouse_genomes_project 9 97448129 97450356 + TEC TEC MGP_LPJ_T0092887.1 MGP_LPJ_G0034914.1 mouse_genomes_project 9 73353892 73381194 + MGP_LPJ_P0092887 Pygo1 protein_coding protein_coding MGP_LPJ_T0009305.1 MGP_LPJ_G0007478.1 mouse_genomes_project 9 90955711 90958905 + 1700017I07Rik lincRNA lincRNA MGP_LPJ_T0101133.1 MGP_LPJ_G0039396.1 mouse_genomes_project 9 106359407 106359549 - Gm25904 snoRNA snoRNA MGP_LPJ_T0091558.1 MGP_LPJ_G0034500.1 mouse_genomes_project 9 36742766 36743699 + MGP_LPJ_P0091558 Olfr907 protein_coding protein_coding MGP_LPJ_T0093278.1 MGP_LPJ_G0035005.1 mouse_genomes_project 9 89667667 89683234 + MGP_LPJ_P0093278 protein_coding protein_coding MGP_LPJ_T0093279.1 MGP_LPJ_G0035005.1 mouse_genomes_project 9 89667667 89683228 + MGP_LPJ_P0093279 protein_coding protein_coding MGP_LPJ_T0093070.1 MGP_LPJ_G0034965.1 mouse_genomes_project 9 79273781 79322053 - MGP_LPJ_P0093070 Slc17a5 protein_coding protein_coding MGP_LPJ_T0093071.1 MGP_LPJ_G0034965.1 mouse_genomes_project 9 79273799 79322027 - MGP_LPJ_P0093071 Slc17a5 protein_coding protein_coding MGP_LPJ_T0093072.1 MGP_LPJ_G0034965.1 mouse_genomes_project 9 79302870 79322039 - MGP_LPJ_P0093072 Slc17a5 protein_coding protein_coding MGP_LPJ_T0002455.1 MGP_LPJ_G0002361.1 mouse_genomes_project 9 102561348 102564373 + TEC TEC MGP_LPJ_T0092901.1 MGP_LPJ_G0034919.1 mouse_genomes_project 9 73432994 73467870 - MGP_LPJ_P0092901 Pigb protein_coding nonsense_mediated_decay MGP_LPJ_T0092902.1 MGP_LPJ_G0034919.1 mouse_genomes_project 9 73434056 73441227 - MGP_LPJ_P0092902 Pigb protein_coding protein_coding MGP_LPJ_T0092904.1 MGP_LPJ_G0034919.1 mouse_genomes_project 9 73439280 73467191 - MGP_LPJ_P0092904 Pigb protein_coding protein_coding MGP_LPJ_T0092905.1 MGP_LPJ_G0034919.1 mouse_genomes_project 9 73440233 73467143 - MGP_LPJ_P0092905 Pigb protein_coding protein_coding MGP_LPJ_T0092907.1 MGP_LPJ_G0034919.1 mouse_genomes_project 9 73441266 73467191 - MGP_LPJ_P0092907 Pigb protein_coding protein_coding MGP_LPJ_T0092908.1 MGP_LPJ_G0034919.1 mouse_genomes_project 9 73443181 73444775 - Pigb protein_coding retained_intron MGP_LPJ_T0092909.1 MGP_LPJ_G0034919.1 mouse_genomes_project 9 73447915 73464478 - MGP_LPJ_P0092909 Pigb protein_coding nonsense_mediated_decay MGP_LPJ_T0092910.1 MGP_LPJ_G0034919.1 mouse_genomes_project 9 73454892 73459120 - Pigb protein_coding retained_intron MGP_LPJ_T0092911.1 MGP_LPJ_G0034919.1 mouse_genomes_project 9 73460675 73462463 - Pigb protein_coding retained_intron MGP_LPJ_T0101115.1 MGP_LPJ_G0039378.1 mouse_genomes_project 9 74274313 74274443 - Gm25105 snoRNA snoRNA MGP_LPJ_T0095087.1 MGP_LPJ_G0035369.1 mouse_genomes_project 9 126981290 127003705 - MGP_LPJ_P0095087 Slc6a20b protein_coding protein_coding MGP_LPJ_T0093818.1 MGP_LPJ_G0035114.1 mouse_genomes_project 9 108246400 108261961 - MGP_LPJ_P0093818 Alas1 protein_coding protein_coding MGP_LPJ_T0093819.1 MGP_LPJ_G0035114.1 mouse_genomes_project 9 108246403 108262357 - MGP_LPJ_P0093819 Alas1 protein_coding protein_coding MGP_LPJ_T0093820.1 MGP_LPJ_G0035114.1 mouse_genomes_project 9 108246888 108262087 - MGP_LPJ_P0093820 Alas1 protein_coding protein_coding MGP_LPJ_T0093821.1 MGP_LPJ_G0035114.1 mouse_genomes_project 9 108246903 108256524 - Alas1 protein_coding processed_transcript MGP_LPJ_T0093822.1 MGP_LPJ_G0035114.1 mouse_genomes_project 9 108247156 108251677 - MGP_LPJ_P0093822 Alas1 protein_coding nonsense_mediated_decay MGP_LPJ_T0093823.1 MGP_LPJ_G0035114.1 mouse_genomes_project 9 108248347 108250030 - Alas1 protein_coding retained_intron MGP_LPJ_T0093824.1 MGP_LPJ_G0035114.1 mouse_genomes_project 9 108249623 108252978 - Alas1 protein_coding retained_intron MGP_LPJ_T0093825.1 MGP_LPJ_G0035114.1 mouse_genomes_project 9 108251762 108262083 - MGP_LPJ_P0093825 Alas1 protein_coding nonsense_mediated_decay MGP_LPJ_T0091537.1 MGP_LPJ_G0034480.1 mouse_genomes_project 9 36258701 36260394 + MGP_LPJ_P0091537 Olfr884 protein_coding protein_coding MGP_LPJ_T0091538.1 MGP_LPJ_G0034480.1 mouse_genomes_project 9 36259344 36260394 + MGP_LPJ_P0091538 Olfr884 protein_coding protein_coding MGP_LPJ_T0092164.1 MGP_LPJ_G0034732.1 mouse_genomes_project 9 54394333 54411879 - MGP_LPJ_P0092164 Chrna3 protein_coding protein_coding MGP_LPJ_T0002413.1 MGP_LPJ_G0002320.1 mouse_genomes_project 9 76656980 76660387 + TEC TEC MGP_LPJ_T0009364.1 MGP_LPJ_G0007522.1 mouse_genomes_project 9 121422993 121429050 - lincRNA lincRNA MGP_LPJ_T0095000.1 MGP_LPJ_G0035337.1 mouse_genomes_project 9 125016501 125055327 + MGP_LPJ_P0095000 Nktr protein_coding protein_coding MGP_LPJ_T0095001.1 MGP_LPJ_G0035337.1 mouse_genomes_project 9 125016503 125041120 + MGP_LPJ_P0095001 Nktr protein_coding nonsense_mediated_decay MGP_LPJ_T0095002.1 MGP_LPJ_G0035337.1 mouse_genomes_project 9 125016529 125030059 + MGP_LPJ_P0095002 Nktr protein_coding unknown_likely_coding MGP_LPJ_T0095003.1 MGP_LPJ_G0035337.1 mouse_genomes_project 9 125016540 125039636 + MGP_LPJ_P0095003 Nktr protein_coding protein_coding MGP_LPJ_T0095004.1 MGP_LPJ_G0035337.1 mouse_genomes_project 9 125016542 125028591 + Nktr protein_coding retained_intron MGP_LPJ_T0095005.1 MGP_LPJ_G0035337.1 mouse_genomes_project 9 125016568 125034019 + Nktr protein_coding retained_intron MGP_LPJ_T0095006.1 MGP_LPJ_G0035337.1 mouse_genomes_project 9 125016623 125017318 + Nktr protein_coding processed_transcript MGP_LPJ_T0095007.1 MGP_LPJ_G0035337.1 mouse_genomes_project 9 125016756 125048324 + MGP_LPJ_P0095007 Nktr protein_coding protein_coding MGP_LPJ_T0095008.1 MGP_LPJ_G0035337.1 mouse_genomes_project 9 125017139 125030093 + MGP_LPJ_P0095008 Nktr protein_coding protein_coding MGP_LPJ_T0095009.1 MGP_LPJ_G0035337.1 mouse_genomes_project 9 125027975 125030161 + Nktr protein_coding retained_intron MGP_LPJ_T0095010.1 MGP_LPJ_G0035337.1 mouse_genomes_project 9 125029724 125041156 + Nktr protein_coding retained_intron MGP_LPJ_T0095011.1 MGP_LPJ_G0035337.1 mouse_genomes_project 9 125049269 125052880 + MGP_LPJ_P0095011 Nktr protein_coding nonsense_mediated_decay MGP_LPJ_T0095012.1 MGP_LPJ_G0035337.1 mouse_genomes_project 9 125049698 125051131 + Nktr protein_coding retained_intron MGP_LPJ_T0095013.1 MGP_LPJ_G0035337.1 mouse_genomes_project 9 125050150 125053341 + MGP_LPJ_P0095013 Nktr protein_coding protein_coding MGP_LPJ_T0095014.1 MGP_LPJ_G0035337.1 mouse_genomes_project 9 125051010 125052840 + Nktr protein_coding retained_intron MGP_LPJ_T0091973.1 MGP_LPJ_G0034669.1 mouse_genomes_project 9 48713804 49015501 - MGP_LPJ_P0091973 Ncam1 protein_coding protein_coding MGP_LPJ_T0091974.1 MGP_LPJ_G0034669.1 mouse_genomes_project 9 48713816 48780916 - MGP_LPJ_P0091974 Ncam1 protein_coding protein_coding MGP_LPJ_T0091975.1 MGP_LPJ_G0034669.1 mouse_genomes_project 9 48717262 49015448 - MGP_LPJ_P0091975 Ncam1 protein_coding protein_coding MGP_LPJ_T0091976.1 MGP_LPJ_G0034669.1 mouse_genomes_project 9 48729493 49015466 - MGP_LPJ_P0091976 Ncam1 protein_coding protein_coding MGP_LPJ_T0091978.1 MGP_LPJ_G0034669.1 mouse_genomes_project 9 48735841 48755760 - MGP_LPJ_P0091978 Ncam1 protein_coding protein_coding MGP_LPJ_T0091979.1 MGP_LPJ_G0034669.1 mouse_genomes_project 9 48743491 49015334 - MGP_LPJ_P0091979 Ncam1 protein_coding protein_coding MGP_LPJ_T0092974.1 MGP_LPJ_G0034936.1 mouse_genomes_project 9 76064375 76131961 - MGP_LPJ_P0092974 Tmod3 protein_coding protein_coding MGP_LPJ_T0092140.1 MGP_LPJ_G0034724.1 mouse_genomes_project 9 54070754 54086673 + MGP_LPJ_P0092140 Dnaja4 protein_coding protein_coding MGP_LPJ_T0092141.1 MGP_LPJ_G0034724.1 mouse_genomes_project 9 54071395 54081253 + MGP_LPJ_P0092141 Dnaja4 protein_coding protein_coding MGP_LPJ_T0092142.1 MGP_LPJ_G0034724.1 mouse_genomes_project 9 54071440 54088227 + MGP_LPJ_P0092142 Dnaja4 protein_coding protein_coding MGP_LPJ_T0009324.1 MGP_LPJ_G0007490.1 mouse_genomes_project 9 97983606 97990416 - lincRNA lincRNA MGP_LPJ_T0092073.1 MGP_LPJ_G0034697.1 mouse_genomes_project 9 51055948 51080797 + Arhgap20 protein_coding retained_intron MGP_LPJ_T0092074.1 MGP_LPJ_G0034697.1 mouse_genomes_project 9 51055956 51123706 + Arhgap20 protein_coding retained_intron MGP_LPJ_T0092075.1 MGP_LPJ_G0034697.1 mouse_genomes_project 9 51055963 51151871 + MGP_LPJ_P0092075 Arhgap20 protein_coding protein_coding MGP_LPJ_T0092076.1 MGP_LPJ_G0034697.1 mouse_genomes_project 9 51056187 51151880 + MGP_LPJ_P0092076 Arhgap20 protein_coding protein_coding MGP_LPJ_T0092077.1 MGP_LPJ_G0034697.1 mouse_genomes_project 9 51111230 51127420 + Arhgap20 protein_coding processed_transcript MGP_LPJ_T0092078.1 MGP_LPJ_G0034697.1 mouse_genomes_project 9 51129794 51146664 + Arhgap20 protein_coding processed_transcript MGP_LPJ_T0090949.1 MGP_LPJ_G0034254.1 mouse_genomes_project 9 11835523 11838279 - MGP_LPJ_P0090949 Ankrd49 protein_coding protein_coding MGP_LPJ_T0002387.1 MGP_LPJ_G0002294.1 mouse_genomes_project 9 72188279 72190016 - TEC TEC MGP_LPJ_T0091020.1 MGP_LPJ_G0034280.1 mouse_genomes_project 9 16099008 16099947 - MGP_LPJ_P0091020 Olfr828 protein_coding protein_coding MGP_LPJ_T0009241.1 MGP_LPJ_G0007427.1 mouse_genomes_project 9 34041854 34098755 - lincRNA lincRNA MGP_LPJ_T0009242.1 MGP_LPJ_G0007427.1 mouse_genomes_project 9 34041901 34098869 - lincRNA lincRNA MGP_LPJ_T0005455.1 MGP_LPJ_G0004622.1 mouse_genomes_project 9 39232581 39233608 - Gm16095 antisense antisense MGP_LPJ_T0094941.1 MGP_LPJ_G0035321.1 mouse_genomes_project 9 123268417 123282906 + MGP_LPJ_P0094941 Slc25a38 protein_coding protein_coding MGP_LPJ_T0094942.1 MGP_LPJ_G0035321.1 mouse_genomes_project 9 123268448 123279373 + MGP_LPJ_P0094942 Slc25a38 protein_coding nonsense_mediated_decay MGP_LPJ_T0094943.1 MGP_LPJ_G0035321.1 mouse_genomes_project 9 123268451 123279002 + Slc25a38 protein_coding processed_transcript MGP_LPJ_T0094944.1 MGP_LPJ_G0035321.1 mouse_genomes_project 9 123268451 123269641 + Slc25a38 protein_coding processed_transcript MGP_LPJ_T0094945.1 MGP_LPJ_G0035321.1 mouse_genomes_project 9 123268467 123282053 + MGP_LPJ_P0094945 Slc25a38 protein_coding nonsense_mediated_decay MGP_LPJ_T0094946.1 MGP_LPJ_G0035321.1 mouse_genomes_project 9 123273552 123280892 + MGP_LPJ_P0094946 Slc25a38 protein_coding protein_coding MGP_LPJ_T0094947.1 MGP_LPJ_G0035321.1 mouse_genomes_project 9 123273691 123278977 + Slc25a38 protein_coding processed_transcript MGP_LPJ_T0009313.1 MGP_LPJ_G0007484.1 mouse_genomes_project 9 93552987 93556121 - Gm29139 lincRNA lincRNA MGP_LPJ_T0009369.1 MGP_LPJ_G0007527.1 mouse_genomes_project 9 125632209 125637012 - Gm26797 lincRNA lincRNA MGP_LPJ_T0091206.1 MGP_LPJ_G0034365.1 mouse_genomes_project 9 19341310 19351778 + MGP_LPJ_P0091206 Ccdc159 protein_coding protein_coding MGP_LPJ_T0091207.1 MGP_LPJ_G0034365.1 mouse_genomes_project 9 19341310 19351778 + MGP_LPJ_P0091207 Ccdc159 protein_coding protein_coding MGP_LPJ_T0094836.1 MGP_LPJ_G0035290.1 mouse_genomes_project 9 119493668 120211913 - MGP_LPJ_P0094836 Rbms3 protein_coding protein_coding MGP_LPJ_T0094837.1 MGP_LPJ_G0035290.1 mouse_genomes_project 9 119498221 120211929 - MGP_LPJ_P0094837 Rbms3 protein_coding protein_coding MGP_LPJ_T0094838.1 MGP_LPJ_G0035290.1 mouse_genomes_project 9 119498504 119759069 - MGP_LPJ_P0094838 Rbms3 protein_coding protein_coding MGP_LPJ_T0094839.1 MGP_LPJ_G0035290.1 mouse_genomes_project 9 119498947 120619435 - MGP_LPJ_P0094839 Rbms3 protein_coding protein_coding MGP_LPJ_T0094840.1 MGP_LPJ_G0035290.1 mouse_genomes_project 9 119498947 120211576 - MGP_LPJ_P0094840 Rbms3 protein_coding protein_coding MGP_LPJ_T0094841.1 MGP_LPJ_G0035290.1 mouse_genomes_project 9 119498948 120211567 - MGP_LPJ_P0094841 Rbms3 protein_coding protein_coding MGP_LPJ_T0094842.1 MGP_LPJ_G0035290.1 mouse_genomes_project 9 119499437 120211933 - MGP_LPJ_P0094842 Rbms3 protein_coding protein_coding MGP_LPJ_T0094843.1 MGP_LPJ_G0035290.1 mouse_genomes_project 9 119503746 119759082 - MGP_LPJ_P0094843 Rbms3 protein_coding protein_coding MGP_LPJ_T0094844.1 MGP_LPJ_G0035290.1 mouse_genomes_project 9 119609637 120211932 - Rbms3 protein_coding retained_intron MGP_LPJ_T0094845.1 MGP_LPJ_G0035290.1 mouse_genomes_project 9 119740037 120211251 - MGP_LPJ_P0094845 Rbms3 protein_coding protein_coding MGP_LPJ_T0094846.1 MGP_LPJ_G0035290.1 mouse_genomes_project 9 119783309 120211929 - Rbms3 protein_coding processed_transcript MGP_LPJ_T0094847.1 MGP_LPJ_G0035290.1 mouse_genomes_project 9 119889088 120211047 - Rbms3 protein_coding processed_transcript MGP_LPJ_T0101087.1 MGP_LPJ_G0039350.1 mouse_genomes_project 9 23146390 23146499 - Gm25861 snoRNA snoRNA MGP_LPJ_T0002466.1 MGP_LPJ_G0002372.1 mouse_genomes_project 9 104040960 104042225 + TEC TEC MGP_LPJ_T0092328.1 MGP_LPJ_G0034782.1 mouse_genomes_project 9 57757748 57763736 - MGP_LPJ_P0092328 Islr2 protein_coding protein_coding MGP_LPJ_T0092329.1 MGP_LPJ_G0034782.1 mouse_genomes_project 9 57757748 57765770 - MGP_LPJ_P0092329 Islr2 protein_coding protein_coding MGP_LPJ_T0092330.1 MGP_LPJ_G0034782.1 mouse_genomes_project 9 57757748 57763985 - MGP_LPJ_P0092330 Islr2 protein_coding protein_coding MGP_LPJ_T0092331.1 MGP_LPJ_G0034782.1 mouse_genomes_project 9 57757748 57763250 - MGP_LPJ_P0092331 Islr2 protein_coding protein_coding MGP_LPJ_T0092332.1 MGP_LPJ_G0034782.1 mouse_genomes_project 9 57757748 57763166 - MGP_LPJ_P0092332 Islr2 protein_coding protein_coding MGP_LPJ_T0091174.1 MGP_LPJ_G0034352.1 mouse_genomes_project 9 18888054 18890859 - MGP_LPJ_P0091174 Tmed1 protein_coding protein_coding MGP_LPJ_T0016021.1 MGP_LPJ_G0014112.1 mouse_genomes_project 9 73238965 73239272 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099822.1 MGP_LPJ_G0038085.1 mouse_genomes_project 9 45614359 45614466 - Gm22805 snRNA snRNA MGP_LPJ_T0091548.1 MGP_LPJ_G0034490.1 mouse_genomes_project 9 36497488 36498439 + MGP_LPJ_P0091548 Olfr895 protein_coding protein_coding MGP_LPJ_T0092498.1 MGP_LPJ_G0034826.1 mouse_genomes_project 9 63300748 63503174 - MGP_LPJ_P0092498 Iqch protein_coding protein_coding MGP_LPJ_T0092499.1 MGP_LPJ_G0034826.1 mouse_genomes_project 9 63300912 63503129 - MGP_LPJ_P0092499 Iqch protein_coding protein_coding MGP_LPJ_T0092500.1 MGP_LPJ_G0034826.1 mouse_genomes_project 9 63300912 63503129 - MGP_LPJ_P0092500 Iqch protein_coding protein_coding MGP_LPJ_T0092501.1 MGP_LPJ_G0034826.1 mouse_genomes_project 9 63300954 63503164 - MGP_LPJ_P0092501 Iqch protein_coding protein_coding MGP_LPJ_T0092502.1 MGP_LPJ_G0034826.1 mouse_genomes_project 9 63301127 63503098 - MGP_LPJ_P0092502 Iqch protein_coding protein_coding MGP_LPJ_T0092503.1 MGP_LPJ_G0034826.1 mouse_genomes_project 9 63471540 63503166 - Iqch protein_coding retained_intron MGP_LPJ_T0101140.1 MGP_LPJ_G0039403.1 mouse_genomes_project 9 115100740 115100873 + Gm24957 snoRNA snoRNA MGP_LPJ_T0094291.1 MGP_LPJ_G0035189.1 mouse_genomes_project 9 110644022 110655127 + MGP_LPJ_P0094291 Usp19 protein_coding protein_coding MGP_LPJ_T0094292.1 MGP_LPJ_G0035189.1 mouse_genomes_project 9 110644260 110655765 + MGP_LPJ_P0094292 Usp19 protein_coding protein_coding MGP_LPJ_T0094293.1 MGP_LPJ_G0035189.1 mouse_genomes_project 9 110644265 110655745 + MGP_LPJ_P0094293 Usp19 protein_coding protein_coding MGP_LPJ_T0094294.1 MGP_LPJ_G0035189.1 mouse_genomes_project 9 110644265 110655745 + MGP_LPJ_P0094294 Usp19 protein_coding protein_coding MGP_LPJ_T0094295.1 MGP_LPJ_G0035189.1 mouse_genomes_project 9 110644276 110655745 + MGP_LPJ_P0094295 Usp19 protein_coding protein_coding MGP_LPJ_T0094296.1 MGP_LPJ_G0035189.1 mouse_genomes_project 9 110646115 110648346 + Usp19 protein_coding retained_intron MGP_LPJ_T0094297.1 MGP_LPJ_G0035189.1 mouse_genomes_project 9 110646889 110647656 + MGP_LPJ_P0094297 Usp19 protein_coding protein_coding MGP_LPJ_T0094298.1 MGP_LPJ_G0035189.1 mouse_genomes_project 9 110647763 110648616 + Usp19 protein_coding retained_intron MGP_LPJ_T0094299.1 MGP_LPJ_G0035189.1 mouse_genomes_project 9 110647792 110648892 + Usp19 protein_coding retained_intron MGP_LPJ_T0094300.1 MGP_LPJ_G0035189.1 mouse_genomes_project 9 110648053 110655127 + MGP_LPJ_P0094300 Usp19 protein_coding protein_coding MGP_LPJ_T0094301.1 MGP_LPJ_G0035189.1 mouse_genomes_project 9 110648967 110649896 + Usp19 protein_coding retained_intron MGP_LPJ_T0094302.1 MGP_LPJ_G0035189.1 mouse_genomes_project 9 110649779 110651990 + Usp19 protein_coding retained_intron MGP_LPJ_T0094303.1 MGP_LPJ_G0035189.1 mouse_genomes_project 9 110650421 110652152 + Usp19 protein_coding retained_intron MGP_LPJ_T0094304.1 MGP_LPJ_G0035189.1 mouse_genomes_project 9 110650521 110652630 + MGP_LPJ_P0094304 Usp19 protein_coding protein_coding MGP_LPJ_T0094305.1 MGP_LPJ_G0035189.1 mouse_genomes_project 9 110652135 110653053 + Usp19 protein_coding retained_intron MGP_LPJ_T0094306.1 MGP_LPJ_G0035189.1 mouse_genomes_project 9 110653577 110655125 + Usp19 protein_coding retained_intron MGP_LPJ_T0016111.1 MGP_LPJ_G0014202.1 mouse_genomes_project 9 107496211 107496614 - processed_pseudogene processed_pseudogene MGP_LPJ_T0092986.1 MGP_LPJ_G0034942.1 mouse_genomes_project 9 76758184 76805685 - MGP_LPJ_P0092986 Gfral protein_coding protein_coding MGP_LPJ_T0092987.1 MGP_LPJ_G0034942.1 mouse_genomes_project 9 76758184 76805685 - MGP_LPJ_P0092987 Gfral protein_coding nonsense_mediated_decay MGP_LPJ_T0091213.1 MGP_LPJ_G0034370.1 mouse_genomes_project 9 19414386 19431210 - MGP_LPJ_P0091213 Ccdc151 protein_coding protein_coding MGP_LPJ_T0091214.1 MGP_LPJ_G0034370.1 mouse_genomes_project 9 19414386 19431210 - MGP_LPJ_P0091214 Ccdc151 protein_coding protein_coding MGP_LPJ_T0090832.1 MGP_LPJ_G0034216.1 mouse_genomes_project 9 3834195 4093017 - MGP_LPJ_P0090832 Dync2h1 protein_coding protein_coding MGP_LPJ_T0090833.1 MGP_LPJ_G0034216.1 mouse_genomes_project 9 3834195 4085616 - MGP_LPJ_P0090833 Dync2h1 protein_coding protein_coding MGP_LPJ_T0090834.1 MGP_LPJ_G0034216.1 mouse_genomes_project 9 3834996 4085527 - MGP_LPJ_P0090834 Dync2h1 protein_coding protein_coding MGP_LPJ_T0090835.1 MGP_LPJ_G0034216.1 mouse_genomes_project 9 3835157 4085527 - MGP_LPJ_P0090835 Dync2h1 protein_coding unknown_likely_coding MGP_LPJ_T0090836.1 MGP_LPJ_G0034216.1 mouse_genomes_project 9 3845531 3855238 - Dync2h1 protein_coding retained_intron MGP_LPJ_T0090837.1 MGP_LPJ_G0034216.1 mouse_genomes_project 9 3930661 4015857 - MGP_LPJ_P0090837 Dync2h1 protein_coding nonsense_mediated_decay MGP_LPJ_T0090838.1 MGP_LPJ_G0034216.1 mouse_genomes_project 9 4049124 4085614 - Dync2h1 protein_coding retained_intron MGP_LPJ_T0090839.1 MGP_LPJ_G0034216.1 mouse_genomes_project 9 4055381 4085535 - MGP_LPJ_P0090839 Dync2h1 protein_coding protein_coding MGP_LPJ_T0002393.1 MGP_LPJ_G0002300.1 mouse_genomes_project 9 72356354 72358001 - TEC TEC MGP_LPJ_T0011061.1 MGP_LPJ_G0009179.1 mouse_genomes_project 9 12399510 12399577 + miRNA miRNA MGP_LPJ_T0005570.1 MGP_LPJ_G0004699.1 mouse_genomes_project 9 110484274 110486322 - antisense antisense MGP_LPJ_T0092286.1 MGP_LPJ_G0034775.1 mouse_genomes_project 9 57323072 57370536 - MGP_LPJ_P0092286 Arid3b protein_coding protein_coding MGP_LPJ_T0092287.1 MGP_LPJ_G0034775.1 mouse_genomes_project 9 57323075 57370538 - MGP_LPJ_P0092287 Arid3b protein_coding protein_coding MGP_LPJ_T0092288.1 MGP_LPJ_G0034775.1 mouse_genomes_project 9 57323078 57324366 - Arid3b protein_coding processed_transcript MGP_LPJ_T0092289.1 MGP_LPJ_G0034775.1 mouse_genomes_project 9 57323230 57368086 - MGP_LPJ_P0092289 Arid3b protein_coding protein_coding MGP_LPJ_T0092290.1 MGP_LPJ_G0034775.1 mouse_genomes_project 9 57324878 57328922 - MGP_LPJ_P0092290 Arid3b protein_coding protein_coding MGP_LPJ_T0092291.1 MGP_LPJ_G0034775.1 mouse_genomes_project 9 57325140 57370308 - MGP_LPJ_P0092291 Arid3b protein_coding nonsense_mediated_decay MGP_LPJ_T0092292.1 MGP_LPJ_G0034775.1 mouse_genomes_project 9 57327386 57370591 - MGP_LPJ_P0092292 Arid3b protein_coding nonsense_mediated_decay MGP_LPJ_T0092293.1 MGP_LPJ_G0034775.1 mouse_genomes_project 9 57327387 57370623 - MGP_LPJ_P0092293 Arid3b protein_coding protein_coding MGP_LPJ_T0092294.1 MGP_LPJ_G0034775.1 mouse_genomes_project 9 57330850 57354436 - MGP_LPJ_P0092294 Arid3b protein_coding protein_coding MGP_LPJ_T0092295.1 MGP_LPJ_G0034775.1 mouse_genomes_project 9 57342086 57370600 - Arid3b protein_coding retained_intron MGP_LPJ_T0011322.1 MGP_LPJ_G0009440.1 mouse_genomes_project 11 85770278 85770586 + Gm23211 misc_RNA misc_RNA MGP_LPJ_T0012558.1 MGP_LPJ_G0010649.1 mouse_genomes_project 11 34639460 34640196 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003301.1 MGP_LPJ_G0003049.1 mouse_genomes_project 11 100207990 100210727 + Gm11592 antisense antisense MGP_LPJ_T0003199.1 MGP_LPJ_G0002969.1 mouse_genomes_project 11 59281502 59283290 + Gm12257 antisense antisense MGP_LPJ_T0003157.1 MGP_LPJ_G0002930.1 mouse_genomes_project 11 27779575 27781844 + Gm12089 antisense antisense MGP_LPJ_T0003363.1 MGP_LPJ_G0003100.1 mouse_genomes_project 11 120969022 120978694 + Gm11739 antisense antisense MGP_LPJ_T0012550.1 MGP_LPJ_G0010641.1 mouse_genomes_project 11 31285376 31286334 - processed_pseudogene processed_pseudogene MGP_LPJ_T0032400.1 MGP_LPJ_G0019089.1 mouse_genomes_project 11 104628525 104630748 + MGP_LPJ_P0032400 Ramp2 protein_coding protein_coding MGP_LPJ_T0032401.1 MGP_LPJ_G0019089.1 mouse_genomes_project 11 104628809 104630182 + Ramp2 protein_coding retained_intron MGP_LPJ_T0032402.1 MGP_LPJ_G0019089.1 mouse_genomes_project 11 104628888 104647649 + MGP_LPJ_P0032402 Ramp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0032403.1 MGP_LPJ_G0019089.1 mouse_genomes_project 11 104628926 104630748 + MGP_LPJ_P0032403 Ramp2 protein_coding protein_coding MGP_LPJ_T0032404.1 MGP_LPJ_G0019089.1 mouse_genomes_project 11 104628929 104630748 + MGP_LPJ_P0032404 Ramp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0032405.1 MGP_LPJ_G0019089.1 mouse_genomes_project 11 104629064 104630134 + MGP_LPJ_P0032405 Ramp2 protein_coding protein_coding MGP_LPJ_T0032406.1 MGP_LPJ_G0019089.1 mouse_genomes_project 11 104629430 104630748 + Ramp2 protein_coding retained_intron MGP_LPJ_T0032407.1 MGP_LPJ_G0019089.1 mouse_genomes_project 11 104629590 104630562 + MGP_LPJ_P0032407 Ramp2 protein_coding protein_coding MGP_LPJ_T0003374.1 MGP_LPJ_G0003110.1 mouse_genomes_project 11 124675166 124682062 - Gm11767 antisense antisense MGP_LPJ_T0033146.1 MGP_LPJ_G0019241.1 mouse_genomes_project 11 113779938 113821364 - MGP_LPJ_P0033146 1700012B07Rik protein_coding protein_coding MGP_LPJ_T0033147.1 MGP_LPJ_G0019241.1 mouse_genomes_project 11 113783842 113821340 - MGP_LPJ_P0033147 1700012B07Rik protein_coding protein_coding MGP_LPJ_T0033148.1 MGP_LPJ_G0019241.1 mouse_genomes_project 11 113783883 113806398 - MGP_LPJ_P0033148 1700012B07Rik protein_coding protein_coding MGP_LPJ_T0098481.1 MGP_LPJ_G0036760.1 mouse_genomes_project 11 111331719 111332906 + Gm11722 sense_intronic sense_intronic MGP_LPJ_T0017128.1 MGP_LPJ_G0015084.1 mouse_genomes_project 11 57937330 57948066 - processed_transcript processed_transcript MGP_LPJ_T0017129.1 MGP_LPJ_G0015084.1 mouse_genomes_project 11 57937350 57948063 - processed_transcript processed_transcript MGP_LPJ_T0017130.1 MGP_LPJ_G0015084.1 mouse_genomes_project 11 57937440 57948047 - processed_transcript processed_transcript MGP_LPJ_T0098398.1 MGP_LPJ_G0036679.1 mouse_genomes_project 11 120634571 120634697 - Gm26413 scaRNA scaRNA MGP_LPJ_T0098931.1 MGP_LPJ_G0037194.1 mouse_genomes_project 11 89410510 89410616 - Gm22883 snRNA snRNA MGP_LPJ_T0032196.1 MGP_LPJ_G0019030.1 mouse_genomes_project 11 103137836 103138757 + MGP_LPJ_P0032196 Gm11565 protein_coding protein_coding MGP_LPJ_T0006247.1 MGP_LPJ_G0005218.1 mouse_genomes_project 11 43678356 43683158 + 4930597A21Rik lincRNA lincRNA MGP_LPJ_T0017153.1 MGP_LPJ_G0015097.1 mouse_genomes_project 11 76496971 76503401 + 1700016P03Rik processed_transcript processed_transcript MGP_LPJ_T0097974.1 MGP_LPJ_G0036255.1 mouse_genomes_project 11 43713313 43713734 + pseudogene pseudogene MGP_LPJ_T0030953.1 MGP_LPJ_G0018686.1 mouse_genomes_project 11 80036818 80038453 + MGP_LPJ_P0030953 Sebox protein_coding protein_coding MGP_LPJ_T0030954.1 MGP_LPJ_G0018686.1 mouse_genomes_project 11 80036870 80038446 + MGP_LPJ_P0030954 Sebox protein_coding protein_coding MGP_LPJ_T0032573.1 MGP_LPJ_G0019125.1 mouse_genomes_project 11 105635988 105659682 - MGP_LPJ_P0032573 Lsm12 protein_coding protein_coding MGP_LPJ_T0032574.1 MGP_LPJ_G0019125.1 mouse_genomes_project 11 105635988 105659749 - MGP_LPJ_P0032574 Lsm12 protein_coding protein_coding MGP_LPJ_T0032575.1 MGP_LPJ_G0019125.1 mouse_genomes_project 11 105637432 105657255 - Lsm12 protein_coding processed_transcript MGP_LPJ_T0032576.1 MGP_LPJ_G0019125.1 mouse_genomes_project 11 105637596 105659710 - Lsm12 protein_coding processed_transcript MGP_LPJ_T0032577.1 MGP_LPJ_G0019125.1 mouse_genomes_project 11 105640621 105659714 - Lsm12 protein_coding processed_transcript MGP_LPJ_T0033322.1 MGP_LPJ_G0019286.1 mouse_genomes_project 11 119809116 119818039 + MGP_LPJ_P0033322 Ict1 protein_coding protein_coding MGP_LPJ_T0033323.1 MGP_LPJ_G0019286.1 mouse_genomes_project 11 119809118 119818027 + MGP_LPJ_P0033323 Ict1 protein_coding protein_coding MGP_LPJ_T0033324.1 MGP_LPJ_G0019286.1 mouse_genomes_project 11 119809121 119816284 + MGP_LPJ_P0033324 Ict1 protein_coding protein_coding MGP_LPJ_T0033325.1 MGP_LPJ_G0019286.1 mouse_genomes_project 11 119809131 119815418 + Ict1 protein_coding retained_intron MGP_LPJ_T0033326.1 MGP_LPJ_G0019286.1 mouse_genomes_project 11 119809135 119815626 + MGP_LPJ_P0033326 Ict1 protein_coding nonsense_mediated_decay MGP_LPJ_T0033327.1 MGP_LPJ_G0019286.1 mouse_genomes_project 11 119809141 119816124 + Ict1 protein_coding processed_transcript MGP_LPJ_T0033328.1 MGP_LPJ_G0019286.1 mouse_genomes_project 11 119809146 119815616 + Ict1 protein_coding retained_intron MGP_LPJ_T0033329.1 MGP_LPJ_G0019286.1 mouse_genomes_project 11 119809186 119816089 + Ict1 protein_coding processed_transcript MGP_LPJ_T0033330.1 MGP_LPJ_G0019286.1 mouse_genomes_project 11 119815225 119816084 + Ict1 protein_coding retained_intron MGP_LPJ_T0033331.1 MGP_LPJ_G0019286.1 mouse_genomes_project 11 119815524 119816273 + Ict1 protein_coding retained_intron MGP_LPJ_T0028918.1 MGP_LPJ_G0018195.1 mouse_genomes_project 11 52133368 52140966 + 9530068E07Rik protein_coding processed_transcript MGP_LPJ_T0028919.1 MGP_LPJ_G0018195.1 mouse_genomes_project 11 52133368 52145444 + MGP_LPJ_P0028919 9530068E07Rik protein_coding protein_coding MGP_LPJ_T0028920.1 MGP_LPJ_G0018195.1 mouse_genomes_project 11 52133368 52145449 + MGP_LPJ_P0028920 9530068E07Rik protein_coding protein_coding MGP_LPJ_T0028921.1 MGP_LPJ_G0018195.1 mouse_genomes_project 11 52133586 52139998 + 9530068E07Rik protein_coding processed_transcript MGP_LPJ_T0101768.1 MGP_LPJ_G0039806.1 mouse_genomes_project 11 60046711 60047086 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0003286.1 MGP_LPJ_G0003037.1 mouse_genomes_project 11 98072445 98088110 + Gm11520 antisense antisense MGP_LPJ_T0031639.1 MGP_LPJ_G0018861.1 mouse_genomes_project 11 97119285 97125465 - Spata20 protein_coding processed_transcript MGP_LPJ_T0031640.1 MGP_LPJ_G0018861.1 mouse_genomes_project 11 97119285 97125712 - MGP_LPJ_P0031640 Spata20 protein_coding protein_coding MGP_LPJ_T0031641.1 MGP_LPJ_G0018861.1 mouse_genomes_project 11 97123452 97124776 - Spata20 protein_coding processed_transcript MGP_LPJ_T0031642.1 MGP_LPJ_G0018861.1 mouse_genomes_project 11 97123716 97125463 - Spata20 protein_coding processed_transcript MGP_LPJ_T0031643.1 MGP_LPJ_G0018861.1 mouse_genomes_project 11 97124971 97126535 - Spata20 protein_coding processed_transcript MGP_LPJ_T0032701.1 MGP_LPJ_G0019143.1 mouse_genomes_project 11 106215494 106228734 - MGP_LPJ_P0032701 Ccdc43 protein_coding protein_coding MGP_LPJ_T0032702.1 MGP_LPJ_G0019143.1 mouse_genomes_project 11 106215496 106228686 - MGP_LPJ_P0032702 Ccdc43 protein_coding protein_coding MGP_LPJ_T0032703.1 MGP_LPJ_G0019143.1 mouse_genomes_project 11 106217148 106228488 - Ccdc43 protein_coding processed_transcript MGP_LPJ_T0032704.1 MGP_LPJ_G0019143.1 mouse_genomes_project 11 106219159 106228686 - Ccdc43 protein_coding processed_transcript MGP_LPJ_T0032705.1 MGP_LPJ_G0019143.1 mouse_genomes_project 11 106220550 106228622 - Ccdc43 protein_coding processed_transcript MGP_LPJ_T0028345.1 MGP_LPJ_G0018032.1 mouse_genomes_project 11 30062835 30069316 - MGP_LPJ_P0028345 Bod1 protein_coding protein_coding MGP_LPJ_T0028346.1 MGP_LPJ_G0018032.1 mouse_genomes_project 11 30064136 30069158 - MGP_LPJ_P0028346 Bod1 protein_coding protein_coding MGP_LPJ_T0028148.1 MGP_LPJ_G0017993.1 mouse_genomes_project 11 20818761 20833410 + MGP_LPJ_P0028148 Cct4 protein_coding protein_coding MGP_LPJ_T0028149.1 MGP_LPJ_G0017993.1 mouse_genomes_project 11 20818868 20824013 + MGP_LPJ_P0028149 Cct4 protein_coding nonsense_mediated_decay MGP_LPJ_T0028150.1 MGP_LPJ_G0017993.1 mouse_genomes_project 11 20818881 20829506 + Cct4 protein_coding retained_intron MGP_LPJ_T0028151.1 MGP_LPJ_G0017993.1 mouse_genomes_project 11 20818892 20826720 + MGP_LPJ_P0028151 Cct4 protein_coding nonsense_mediated_decay MGP_LPJ_T0028152.1 MGP_LPJ_G0017993.1 mouse_genomes_project 11 20818892 20832781 + MGP_LPJ_P0028152 Cct4 protein_coding protein_coding MGP_LPJ_T0028153.1 MGP_LPJ_G0017993.1 mouse_genomes_project 11 20818894 20826773 + MGP_LPJ_P0028153 Cct4 protein_coding nonsense_mediated_decay MGP_LPJ_T0028154.1 MGP_LPJ_G0017993.1 mouse_genomes_project 11 20825247 20826725 + Cct4 protein_coding retained_intron MGP_LPJ_T0028155.1 MGP_LPJ_G0017993.1 mouse_genomes_project 11 20830566 20831249 + Cct4 protein_coding processed_transcript MGP_LPJ_T0028156.1 MGP_LPJ_G0017993.1 mouse_genomes_project 11 20831563 20832485 + Cct4 protein_coding retained_intron MGP_LPJ_T0031776.1 MGP_LPJ_G0018898.1 mouse_genomes_project 11 98848171 98856066 + MGP_LPJ_P0031776 Gip protein_coding protein_coding MGP_LPJ_T0031777.1 MGP_LPJ_G0018898.1 mouse_genomes_project 11 98848672 98856066 + MGP_LPJ_P0031777 Gip protein_coding protein_coding MGP_LPJ_T0012569.1 MGP_LPJ_G0010660.1 mouse_genomes_project 11 42469494 42469784 - processed_pseudogene processed_pseudogene MGP_LPJ_T0029616.1 MGP_LPJ_G0018376.1 mouse_genomes_project 11 63763392 63793978 + MGP_LPJ_P0029616 Pmp22 protein_coding protein_coding MGP_LPJ_T0029617.1 MGP_LPJ_G0018376.1 mouse_genomes_project 11 63765922 63793979 + MGP_LPJ_P0029617 Pmp22 protein_coding protein_coding MGP_LPJ_T0029618.1 MGP_LPJ_G0018376.1 mouse_genomes_project 11 63766979 63792916 + MGP_LPJ_P0029618 Pmp22 protein_coding protein_coding MGP_LPJ_T0029619.1 MGP_LPJ_G0018376.1 mouse_genomes_project 11 63767213 63768900 + Pmp22 protein_coding processed_transcript MGP_LPJ_T0029620.1 MGP_LPJ_G0018376.1 mouse_genomes_project 11 63767478 63792998 + MGP_LPJ_P0029620 Pmp22 protein_coding protein_coding MGP_LPJ_T0028413.1 MGP_LPJ_G0018050.1 mouse_genomes_project 11 31660838 31690331 - MGP_LPJ_P0028413 Fgf18 protein_coding protein_coding MGP_LPJ_T0101786.1 MGP_LPJ_G0039824.1 mouse_genomes_project 11 97443295 97574447 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0101774.1 MGP_LPJ_G0039812.1 mouse_genomes_project 11 75312952 75320333 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0098126.1 MGP_LPJ_G0036407.1 mouse_genomes_project 11 101278223 101278330 - n-R5s73 rRNA rRNA MGP_LPJ_T0000874.1 MGP_LPJ_G0000803.1 mouse_genomes_project 11 16017681 16018277 + TEC TEC MGP_LPJ_T0028621.1 MGP_LPJ_G0018109.1 mouse_genomes_project 11 45932229 45953739 + MGP_LPJ_P0028621 Havcr1 protein_coding protein_coding MGP_LPJ_T0028622.1 MGP_LPJ_G0018109.1 mouse_genomes_project 11 45937593 45972564 + MGP_LPJ_P0028622 Havcr1 protein_coding protein_coding MGP_LPJ_T0028623.1 MGP_LPJ_G0018109.1 mouse_genomes_project 11 45947999 45972562 + MGP_LPJ_P0028623 Havcr1 protein_coding protein_coding MGP_LPJ_T0028624.1 MGP_LPJ_G0018109.1 mouse_genomes_project 11 45948653 45972564 + MGP_LPJ_P0028624 Havcr1 protein_coding protein_coding MGP_LPJ_T0003209.1 MGP_LPJ_G0002976.1 mouse_genomes_project 11 61425949 61436884 - Map2k3os antisense antisense MGP_LPJ_T0006347.1 MGP_LPJ_G0005294.1 mouse_genomes_project 11 99095248 99112038 + Gm53 lincRNA lincRNA MGP_LPJ_T0006348.1 MGP_LPJ_G0005294.1 mouse_genomes_project 11 99095787 99112252 + Gm53 lincRNA lincRNA MGP_LPJ_T0006349.1 MGP_LPJ_G0005294.1 mouse_genomes_project 11 99096675 99109247 + Gm53 lincRNA lincRNA MGP_LPJ_T0006350.1 MGP_LPJ_G0005294.1 mouse_genomes_project 11 99109163 99112422 + Gm53 lincRNA lincRNA MGP_LPJ_T0027886.1 MGP_LPJ_G0017928.1 mouse_genomes_project 11 3432673 3441516 - MGP_LPJ_P0027886 Ddx56 protein_coding protein_coding MGP_LPJ_T0027887.1 MGP_LPJ_G0017928.1 mouse_genomes_project 11 3439050 3440136 - Ddx56 protein_coding retained_intron MGP_LPJ_T0027888.1 MGP_LPJ_G0017928.1 mouse_genomes_project 11 3439380 3441516 - MGP_LPJ_P0027888 Ddx56 protein_coding protein_coding MGP_LPJ_T0027889.1 MGP_LPJ_G0017928.1 mouse_genomes_project 11 3440789 3441490 - Ddx56 protein_coding retained_intron MGP_LPJ_T0028420.1 MGP_LPJ_G0018052.1 mouse_genomes_project 11 31751360 31754179 - MGP_LPJ_P0028420 Tlx3 protein_coding protein_coding MGP_LPJ_T0030623.1 MGP_LPJ_G0018618.1 mouse_genomes_project 11 76849970 76853045 + MGP_LPJ_P0030623 Rilp protein_coding protein_coding MGP_LPJ_T0030624.1 MGP_LPJ_G0018618.1 mouse_genomes_project 11 76850343 76853040 + Rilp protein_coding retained_intron MGP_LPJ_T0028670.1 MGP_LPJ_G0018127.1 mouse_genomes_project 11 48521951 48530420 + MGP_LPJ_P0028670 Olfr1395 protein_coding protein_coding MGP_LPJ_T0028671.1 MGP_LPJ_G0018127.1 mouse_genomes_project 11 48529466 48530420 + MGP_LPJ_P0028671 Olfr1395 protein_coding protein_coding MGP_LPJ_T0003162.1 MGP_LPJ_G0002935.1 mouse_genomes_project 11 34732855 34736036 + Gm12126 antisense antisense MGP_LPJ_T0098899.1 MGP_LPJ_G0037162.1 mouse_genomes_project 11 38708182 38708327 + Gm24192 snRNA snRNA MGP_LPJ_T0101758.1 MGP_LPJ_G0039796.1 mouse_genomes_project 11 5254676 5256319 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0098928.1 MGP_LPJ_G0037191.1 mouse_genomes_project 11 87156131 87156238 + Gm23506 snRNA snRNA MGP_LPJ_T0030373.1 MGP_LPJ_G0018540.1 mouse_genomes_project 11 73426143 73434711 + MGP_LPJ_P0030373 Xaf1 protein_coding protein_coding MGP_LPJ_T0030374.1 MGP_LPJ_G0018540.1 mouse_genomes_project 11 73426153 73437601 + MGP_LPJ_P0030374 Xaf1 protein_coding protein_coding MGP_LPJ_T0030375.1 MGP_LPJ_G0018540.1 mouse_genomes_project 11 73426177 73434391 + MGP_LPJ_P0030375 Xaf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0030376.1 MGP_LPJ_G0018540.1 mouse_genomes_project 11 73426179 73434410 + Xaf1 protein_coding retained_intron MGP_LPJ_T0030377.1 MGP_LPJ_G0018540.1 mouse_genomes_project 11 73426192 73439127 + MGP_LPJ_P0030377 Xaf1 protein_coding protein_coding MGP_LPJ_T0028239.1 MGP_LPJ_G0018009.1 mouse_genomes_project 11 24568536 24569140 + MGP_LPJ_P0028239 Gm6899 protein_coding protein_coding MGP_LPJ_T0032056.1 MGP_LPJ_G0018969.1 mouse_genomes_project 11 101674122 101687815 + MGP_LPJ_P0032056 Gsdma3 protein_coding protein_coding MGP_LPJ_T0032057.1 MGP_LPJ_G0018969.1 mouse_genomes_project 11 101674122 101687730 + MGP_LPJ_P0032057 Gsdma3 protein_coding protein_coding MGP_LPJ_T0033666.1 MGP_LPJ_G0019345.1 mouse_genomes_project 11 121361902 121384190 + MGP_LPJ_P0033666 Mfsd11 protein_coding nonsense_mediated_decay MGP_LPJ_T0033667.1 MGP_LPJ_G0019345.1 mouse_genomes_project 11 121362757 121368481 + Mfsd11 protein_coding retained_intron MGP_LPJ_T0033668.1 MGP_LPJ_G0019345.1 mouse_genomes_project 11 121362937 121363522 + Mfsd11 protein_coding processed_transcript MGP_LPJ_T0033669.1 MGP_LPJ_G0019345.1 mouse_genomes_project 11 121363225 121384197 + MGP_LPJ_P0033669 Mfsd11 protein_coding nonsense_mediated_decay MGP_LPJ_T0033670.1 MGP_LPJ_G0019345.1 mouse_genomes_project 11 121363242 121363720 + Mfsd11 protein_coding retained_intron MGP_LPJ_T0033671.1 MGP_LPJ_G0019345.1 mouse_genomes_project 11 121363283 121384935 + MGP_LPJ_P0033671 Mfsd11 protein_coding protein_coding MGP_LPJ_T0033672.1 MGP_LPJ_G0019345.1 mouse_genomes_project 11 121363292 121364180 + Mfsd11 protein_coding retained_intron MGP_LPJ_T0033673.1 MGP_LPJ_G0019345.1 mouse_genomes_project 11 121363358 121384935 + MGP_LPJ_P0033673 Mfsd11 protein_coding nonsense_mediated_decay MGP_LPJ_T0033674.1 MGP_LPJ_G0019345.1 mouse_genomes_project 11 121363489 121383645 + MGP_LPJ_P0033674 Mfsd11 protein_coding nonsense_mediated_decay MGP_LPJ_T0033675.1 MGP_LPJ_G0019345.1 mouse_genomes_project 11 121363541 121383423 + MGP_LPJ_P0033675 Mfsd11 protein_coding protein_coding MGP_LPJ_T0033676.1 MGP_LPJ_G0019345.1 mouse_genomes_project 11 121368510 121371210 + Mfsd11 protein_coding retained_intron MGP_LPJ_T0033677.1 MGP_LPJ_G0019345.1 mouse_genomes_project 11 121377933 121383315 + Mfsd11 protein_coding processed_transcript MGP_LPJ_T0029131.1 MGP_LPJ_G0018251.1 mouse_genomes_project 11 58131517 58138302 - MGP_LPJ_P0029131 Bex4 protein_coding protein_coding MGP_LPJ_T0031063.1 MGP_LPJ_G0018715.1 mouse_genomes_project 11 82068682 82091081 + MGP_LPJ_P0031063 Zfp207 protein_coding nonsense_mediated_decay MGP_LPJ_T0031064.1 MGP_LPJ_G0018715.1 mouse_genomes_project 11 82068682 82081588 + MGP_LPJ_P0031064 Zfp207 protein_coding protein_coding MGP_LPJ_T0031065.1 MGP_LPJ_G0018715.1 mouse_genomes_project 11 82068706 82081591 + MGP_LPJ_P0031065 Zfp207 protein_coding protein_coding MGP_LPJ_T0031066.1 MGP_LPJ_G0018715.1 mouse_genomes_project 11 82068734 82079626 + MGP_LPJ_P0031066 Zfp207 protein_coding protein_coding MGP_LPJ_T0031067.1 MGP_LPJ_G0018715.1 mouse_genomes_project 11 82068800 82080909 + MGP_LPJ_P0031067 Zfp207 protein_coding protein_coding MGP_LPJ_T0031068.1 MGP_LPJ_G0018715.1 mouse_genomes_project 11 82071282 82077232 + MGP_LPJ_P0031068 Zfp207 protein_coding protein_coding MGP_LPJ_T0031069.1 MGP_LPJ_G0018715.1 mouse_genomes_project 11 82074497 82090169 + MGP_LPJ_P0031069 Zfp207 protein_coding nonsense_mediated_decay MGP_LPJ_T0027956.1 MGP_LPJ_G0017945.1 mouse_genomes_project 11 5672741 5922791 - MGP_LPJ_P0027956 Tns3 protein_coding protein_coding MGP_LPJ_T0027957.1 MGP_LPJ_G0017945.1 mouse_genomes_project 11 5695905 5713351 - Tns3 protein_coding processed_transcript MGP_LPJ_T0027958.1 MGP_LPJ_G0017945.1 mouse_genomes_project 11 5788000 5795486 - Tns3 protein_coding processed_transcript MGP_LPJ_T0027959.1 MGP_LPJ_G0017945.1 mouse_genomes_project 11 5795799 5830609 - Tns3 protein_coding processed_transcript MGP_LPJ_T0003369.1 MGP_LPJ_G0003105.1 mouse_genomes_project 11 122394499 122395916 - Gm11724 antisense antisense MGP_LPJ_T0029082.1 MGP_LPJ_G0018233.1 mouse_genomes_project 11 54930325 54989579 - MGP_LPJ_P0029082 Anxa6 protein_coding protein_coding MGP_LPJ_T0029083.1 MGP_LPJ_G0018233.1 mouse_genomes_project 11 54930325 54989579 - MGP_LPJ_P0029083 Anxa6 protein_coding protein_coding MGP_LPJ_T0029084.1 MGP_LPJ_G0018233.1 mouse_genomes_project 11 54942385 54989549 - Anxa6 protein_coding processed_transcript MGP_LPJ_T0029135.1 MGP_LPJ_G0018253.1 mouse_genomes_project 11 58312921 58328654 + MGP_LPJ_P0029135 Cnot8 protein_coding protein_coding MGP_LPJ_T0029136.1 MGP_LPJ_G0018253.1 mouse_genomes_project 11 58312997 58328654 + MGP_LPJ_P0029136 Cnot8 protein_coding protein_coding MGP_LPJ_T0029137.1 MGP_LPJ_G0018253.1 mouse_genomes_project 11 58313134 58321623 + MGP_LPJ_P0029137 Cnot8 protein_coding protein_coding MGP_LPJ_T0029138.1 MGP_LPJ_G0018253.1 mouse_genomes_project 11 58324278 58327318 + Cnot8 protein_coding processed_transcript MGP_LPJ_T0027662.1 MGP_LPJ_G0017877.1 mouse_genomes_project 11 911412 930150 - MGP_LPJ_P0027662 Tcn2 protein_coding protein_coding MGP_LPJ_T0027663.1 MGP_LPJ_G0017877.1 mouse_genomes_project 11 911412 932012 - MGP_LPJ_P0027663 Tcn2 protein_coding protein_coding MGP_LPJ_T0027664.1 MGP_LPJ_G0017877.1 mouse_genomes_project 11 911412 932211 - MGP_LPJ_P0027664 Tcn2 protein_coding protein_coding MGP_LPJ_T0027665.1 MGP_LPJ_G0017877.1 mouse_genomes_project 11 911412 932130 - MGP_LPJ_P0027665 Tcn2 protein_coding protein_coding MGP_LPJ_T0027666.1 MGP_LPJ_G0017877.1 mouse_genomes_project 11 911412 932096 - MGP_LPJ_P0027666 Tcn2 protein_coding protein_coding MGP_LPJ_T0027667.1 MGP_LPJ_G0017877.1 mouse_genomes_project 11 911412 932047 - MGP_LPJ_P0027667 Tcn2 protein_coding protein_coding MGP_LPJ_T0027668.1 MGP_LPJ_G0017877.1 mouse_genomes_project 11 911412 930165 - MGP_LPJ_P0027668 Tcn2 protein_coding protein_coding MGP_LPJ_T0033747.1 MGP_LPJ_G0019362.1 mouse_genomes_project 11 122610576 122648156 + MGP_LPJ_P0033747 Pgs1 protein_coding protein_coding MGP_LPJ_T0033748.1 MGP_LPJ_G0019362.1 mouse_genomes_project 11 122611169 122648156 + MGP_LPJ_P0033748 Pgs1 protein_coding nonsense_mediated_decay MGP_LPJ_T0033749.1 MGP_LPJ_G0019362.1 mouse_genomes_project 11 122625033 122648070 + MGP_LPJ_P0033749 Pgs1 protein_coding nonsense_mediated_decay MGP_LPJ_T0033750.1 MGP_LPJ_G0019362.1 mouse_genomes_project 11 122636608 122648156 + Pgs1 protein_coding retained_intron MGP_LPJ_T0033359.1 MGP_LPJ_G0019292.1 mouse_genomes_project 11 119901300 119902694 - MGP_LPJ_P0033359 Nt5c protein_coding protein_coding MGP_LPJ_T0033360.1 MGP_LPJ_G0019292.1 mouse_genomes_project 11 119901300 119902741 - MGP_LPJ_P0033360 Nt5c protein_coding protein_coding MGP_LPJ_T0033361.1 MGP_LPJ_G0019292.1 mouse_genomes_project 11 119901518 119902730 - Nt5c protein_coding retained_intron MGP_LPJ_T0033362.1 MGP_LPJ_G0019292.1 mouse_genomes_project 11 119901580 119902083 - Nt5c protein_coding retained_intron MGP_LPJ_T0033363.1 MGP_LPJ_G0019292.1 mouse_genomes_project 11 119901651 119902252 - Nt5c protein_coding retained_intron MGP_LPJ_T0029680.1 MGP_LPJ_G0018394.1 mouse_genomes_project 11 68005780 68034982 + MGP_LPJ_P0029680 Myh2 protein_coding protein_coding MGP_LPJ_T0029681.1 MGP_LPJ_G0018394.1 mouse_genomes_project 11 68005819 68009377 + Myh2 protein_coding retained_intron MGP_LPJ_T0029682.1 MGP_LPJ_G0018394.1 mouse_genomes_project 11 68005973 68034979 + MGP_LPJ_P0029682 Myh2 protein_coding protein_coding MGP_LPJ_T0030583.1 MGP_LPJ_G0018608.1 mouse_genomes_project 11 76501709 76504603 - MGP_LPJ_P0030583 Ovca2 protein_coding protein_coding MGP_LPJ_T0030586.1 MGP_LPJ_G0018608.1 mouse_genomes_project 11 76503568 76504555 - Ovca2 protein_coding processed_transcript MGP_LPJ_T0033740.1 MGP_LPJ_G0019359.1 mouse_genomes_project 11 122471519 122476189 + MGP_LPJ_P0033740 Tmem235 protein_coding protein_coding MGP_LPJ_T0033834.1 MGP_LPJ_G0019380.1 mouse_genomes_project 11 123975294 123990335 - MGP_LPJ_P0033834 Eif4a3 protein_coding protein_coding MGP_LPJ_T0033835.1 MGP_LPJ_G0019380.1 mouse_genomes_project 11 123975295 123976009 - Eif4a3 protein_coding processed_transcript MGP_LPJ_T0033836.1 MGP_LPJ_G0019380.1 mouse_genomes_project 11 123975295 123975943 - Eif4a3 protein_coding processed_transcript MGP_LPJ_T0033837.1 MGP_LPJ_G0019380.1 mouse_genomes_project 11 123982369 123983470 - Eif4a3 protein_coding processed_transcript MGP_LPJ_T0033838.1 MGP_LPJ_G0019380.1 mouse_genomes_project 11 123982716 123990260 - MGP_LPJ_P0033838 Eif4a3 protein_coding protein_coding MGP_LPJ_T0033841.1 MGP_LPJ_G0019380.1 mouse_genomes_project 11 123987536 123990264 - Eif4a3 protein_coding processed_transcript MGP_LPJ_T0006255.1 MGP_LPJ_G0005225.1 mouse_genomes_project 11 49740526 49803976 + Gm26542 lincRNA lincRNA MGP_LPJ_T0028715.1 MGP_LPJ_G0018143.1 mouse_genomes_project 11 49131612 49133121 + MGP_LPJ_P0028715 Scgb3a1 protein_coding protein_coding MGP_LPJ_T0028716.1 MGP_LPJ_G0018143.1 mouse_genomes_project 11 49131612 49133121 + MGP_LPJ_P0028716 Scgb3a1 protein_coding protein_coding MGP_LPJ_T0029572.1 MGP_LPJ_G0018365.1 mouse_genomes_project 11 63174573 63202786 + Trpv2 protein_coding processed_transcript MGP_LPJ_T0029573.1 MGP_LPJ_G0018365.1 mouse_genomes_project 11 63174625 63203354 + MGP_LPJ_P0029573 Trpv2 protein_coding protein_coding MGP_LPJ_T0029574.1 MGP_LPJ_G0018365.1 mouse_genomes_project 11 63175634 63182217 + Trpv2 protein_coding processed_transcript MGP_LPJ_T0029575.1 MGP_LPJ_G0018365.1 mouse_genomes_project 11 63176212 63202786 + MGP_LPJ_P0029575 Trpv2 protein_coding protein_coding MGP_LPJ_T0029576.1 MGP_LPJ_G0018365.1 mouse_genomes_project 11 63182179 63202786 + Trpv2 protein_coding processed_transcript MGP_LPJ_T0017143.1 MGP_LPJ_G0015091.1 mouse_genomes_project 11 66936869 67077600 + Gm12296 processed_transcript processed_transcript MGP_LPJ_T0098889.1 MGP_LPJ_G0037152.1 mouse_genomes_project 11 17877595 17877698 - Gm26253 snRNA snRNA MGP_LPJ_T0012555.1 MGP_LPJ_G0010646.1 mouse_genomes_project 11 32001874 32002406 + processed_pseudogene processed_pseudogene MGP_LPJ_T0029813.1 MGP_LPJ_G0018424.1 mouse_genomes_project 11 70080983 70084863 + MGP_LPJ_P0029813 Vamp2 protein_coding protein_coding MGP_LPJ_T0029814.1 MGP_LPJ_G0018424.1 mouse_genomes_project 11 70081003 70083170 + MGP_LPJ_P0029814 Vamp2 protein_coding protein_coding MGP_LPJ_T0029815.1 MGP_LPJ_G0018424.1 mouse_genomes_project 11 70081015 70082178 + Vamp2 protein_coding retained_intron MGP_LPJ_T0029816.1 MGP_LPJ_G0018424.1 mouse_genomes_project 11 70081036 70082553 + Vamp2 protein_coding processed_transcript MGP_LPJ_T0029817.1 MGP_LPJ_G0018424.1 mouse_genomes_project 11 70082108 70082679 + Vamp2 protein_coding retained_intron MGP_LPJ_T0029217.1 MGP_LPJ_G0018292.1 mouse_genomes_project 11 59346646 59347260 + MGP_LPJ_P0029217 Hist3h2ba protein_coding protein_coding MGP_LPJ_T0030771.1 MGP_LPJ_G0018649.1 mouse_genomes_project 11 78931911 78940003 + MGP_LPJ_P0030771 Coro6 protein_coding protein_coding MGP_LPJ_T0030772.1 MGP_LPJ_G0018649.1 mouse_genomes_project 11 78932145 78933451 + MGP_LPJ_P0030772 Coro6 protein_coding protein_coding MGP_LPJ_T0030773.1 MGP_LPJ_G0018649.1 mouse_genomes_project 11 78933332 78939120 + MGP_LPJ_P0030773 Coro6 protein_coding protein_coding MGP_LPJ_T0030774.1 MGP_LPJ_G0018649.1 mouse_genomes_project 11 78933332 78939120 + MGP_LPJ_P0030774 Coro6 protein_coding protein_coding MGP_LPJ_T0030775.1 MGP_LPJ_G0018649.1 mouse_genomes_project 11 78933407 78939020 + MGP_LPJ_P0030775 Coro6 protein_coding protein_coding MGP_LPJ_T0030776.1 MGP_LPJ_G0018649.1 mouse_genomes_project 11 78933407 78939020 + MGP_LPJ_P0030776 Coro6 protein_coding protein_coding MGP_LPJ_T0003208.1 MGP_LPJ_G0002975.1 mouse_genomes_project 11 60714120 60715241 + Gm12265 antisense antisense MGP_LPJ_T0031702.1 MGP_LPJ_G0018879.1 mouse_genomes_project 11 97773460 97789844 - MGP_LPJ_P0031702 Pdk2 protein_coding protein_coding MGP_LPJ_T0031703.1 MGP_LPJ_G0018879.1 mouse_genomes_project 11 97774156 97775779 - Pdk2 protein_coding processed_transcript MGP_LPJ_T0031704.1 MGP_LPJ_G0018879.1 mouse_genomes_project 11 97775930 97776627 - Pdk2 protein_coding processed_transcript MGP_LPJ_T0031705.1 MGP_LPJ_G0018879.1 mouse_genomes_project 11 97776856 97789048 - Pdk2 protein_coding processed_transcript MGP_LPJ_T0031706.1 MGP_LPJ_G0018879.1 mouse_genomes_project 11 97780403 97789365 - Pdk2 protein_coding processed_transcript MGP_LPJ_T0100136.1 MGP_LPJ_G0038399.1 mouse_genomes_project 11 25337899 25338031 - Gm25387 snoRNA snoRNA MGP_LPJ_T0029203.1 MGP_LPJ_G0018284.1 mouse_genomes_project 11 59102247 59111504 - MGP_LPJ_P0029203 Fam183b protein_coding protein_coding MGP_LPJ_T0029204.1 MGP_LPJ_G0018284.1 mouse_genomes_project 11 59102261 59111504 - MGP_LPJ_P0029204 Fam183b protein_coding protein_coding MGP_LPJ_T0012531.1 MGP_LPJ_G0010622.1 mouse_genomes_project 11 25739282 25739777 + processed_pseudogene processed_pseudogene MGP_LPJ_T0029128.1 MGP_LPJ_G0018250.1 mouse_genomes_project 11 57990181 57994286 - MGP_LPJ_P0029128 Hand1 protein_coding protein_coding MGP_LPJ_T0029129.1 MGP_LPJ_G0018250.1 mouse_genomes_project 11 57990183 57993629 - MGP_LPJ_P0029129 Hand1 protein_coding protein_coding MGP_LPJ_T0029130.1 MGP_LPJ_G0018250.1 mouse_genomes_project 11 57993175 57994286 - MGP_LPJ_P0029130 Hand1 protein_coding protein_coding MGP_LPJ_T0031467.1 MGP_LPJ_G0018819.1 mouse_genomes_project 11 90032771 90034654 - MGP_LPJ_P0031467 protein_coding protein_coding MGP_LPJ_T0012661.1 MGP_LPJ_G0010752.1 mouse_genomes_project 11 74594385 74594772 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003338.1 MGP_LPJ_G0003080.1 mouse_genomes_project 11 110602410 110603749 - Gm11706 antisense antisense MGP_LPJ_T0003320.1 MGP_LPJ_G0003063.1 mouse_genomes_project 11 105009732 105016495 - antisense antisense MGP_LPJ_T0009725.1 MGP_LPJ_G0007843.1 mouse_genomes_project 11 76497799 76497890 + Mir212 miRNA miRNA MGP_LPJ_T0029310.1 MGP_LPJ_G0018320.1 mouse_genomes_project 11 60432465 60433362 - Pemt protein_coding processed_transcript MGP_LPJ_T0029311.1 MGP_LPJ_G0018320.1 mouse_genomes_project 11 60432465 60498302 - MGP_LPJ_P0029311 Pemt protein_coding protein_coding MGP_LPJ_T0029312.1 MGP_LPJ_G0018320.1 mouse_genomes_project 11 60432465 60514507 - MGP_LPJ_P0029312 Pemt protein_coding protein_coding MGP_LPJ_T0029313.1 MGP_LPJ_G0018320.1 mouse_genomes_project 11 60432465 60514511 - MGP_LPJ_P0029313 Pemt protein_coding protein_coding MGP_LPJ_T0029314.1 MGP_LPJ_G0018320.1 mouse_genomes_project 11 60432678 60498203 - Pemt protein_coding processed_transcript MGP_LPJ_T0029315.1 MGP_LPJ_G0018320.1 mouse_genomes_project 11 60432695 60503814 - MGP_LPJ_P0029315 Pemt protein_coding protein_coding MGP_LPJ_T0029316.1 MGP_LPJ_G0018320.1 mouse_genomes_project 11 60436005 60514519 - MGP_LPJ_P0029316 Pemt protein_coding protein_coding MGP_LPJ_T0029317.1 MGP_LPJ_G0018320.1 mouse_genomes_project 11 60438710 60482541 - Pemt protein_coding processed_transcript MGP_LPJ_T0029318.1 MGP_LPJ_G0018320.1 mouse_genomes_project 11 60438730 60445603 - Pemt protein_coding processed_transcript MGP_LPJ_T0029319.1 MGP_LPJ_G0018320.1 mouse_genomes_project 11 60512574 60514515 - Pemt protein_coding processed_transcript MGP_LPJ_T0032186.1 MGP_LPJ_G0019020.1 mouse_genomes_project 11 102980859 102988564 - MGP_LPJ_P0032186 protein_coding protein_coding MGP_LPJ_T0029363.1 MGP_LPJ_G0018327.1 mouse_genomes_project 11 60941322 60948577 + Drg2 protein_coding retained_intron MGP_LPJ_T0029364.1 MGP_LPJ_G0018327.1 mouse_genomes_project 11 60941322 60954946 + MGP_LPJ_P0029364 Drg2 protein_coding protein_coding MGP_LPJ_T0029365.1 MGP_LPJ_G0018327.1 mouse_genomes_project 11 60941355 60949375 + Drg2 protein_coding retained_intron MGP_LPJ_T0029366.1 MGP_LPJ_G0018327.1 mouse_genomes_project 11 60946152 60947059 + Drg2 protein_coding retained_intron MGP_LPJ_T0029367.1 MGP_LPJ_G0018327.1 mouse_genomes_project 11 60948230 60949770 + Drg2 protein_coding retained_intron MGP_LPJ_T0028411.1 MGP_LPJ_G0018049.1 mouse_genomes_project 11 31332394 31339321 - MGP_LPJ_P0028411 Smim23 protein_coding protein_coding MGP_LPJ_T0028412.1 MGP_LPJ_G0018049.1 mouse_genomes_project 11 31334237 31339364 - MGP_LPJ_P0028412 Smim23 protein_coding protein_coding MGP_LPJ_T0006324.1 MGP_LPJ_G0005278.1 mouse_genomes_project 11 90235139 90243923 - 2010015M23Rik lincRNA lincRNA MGP_LPJ_T0098400.1 MGP_LPJ_G0036681.1 mouse_genomes_project 11 121613887 121614080 + Gm26083 scaRNA scaRNA MGP_LPJ_T0033000.1 MGP_LPJ_G0019213.1 mouse_genomes_project 11 110532963 110552194 + MGP_LPJ_P0033000 Milr1 protein_coding protein_coding MGP_LPJ_T0033001.1 MGP_LPJ_G0019213.1 mouse_genomes_project 11 110532977 110550973 + MGP_LPJ_P0033001 Milr1 protein_coding protein_coding MGP_LPJ_T0033002.1 MGP_LPJ_G0019213.1 mouse_genomes_project 11 110532977 110550550 + MGP_LPJ_P0033002 Milr1 protein_coding protein_coding MGP_LPJ_T0033003.1 MGP_LPJ_G0019213.1 mouse_genomes_project 11 110532977 110550550 + MGP_LPJ_P0033003 Milr1 protein_coding protein_coding MGP_LPJ_T0033004.1 MGP_LPJ_G0019213.1 mouse_genomes_project 11 110533002 110552119 + MGP_LPJ_P0033004 Milr1 protein_coding protein_coding MGP_LPJ_T0033005.1 MGP_LPJ_G0019213.1 mouse_genomes_project 11 110533005 110552117 + MGP_LPJ_P0033005 Milr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0033006.1 MGP_LPJ_G0019213.1 mouse_genomes_project 11 110533005 110551165 + MGP_LPJ_P0033006 Milr1 protein_coding protein_coding MGP_LPJ_T0033007.1 MGP_LPJ_G0019213.1 mouse_genomes_project 11 110536680 110552120 + MGP_LPJ_P0033007 Milr1 protein_coding protein_coding MGP_LPJ_T0029978.1 MGP_LPJ_G0018465.1 mouse_genomes_project 11 70885477 70886577 + MGP_LPJ_P0029978 Tmem256 protein_coding protein_coding MGP_LPJ_T0029979.1 MGP_LPJ_G0018465.1 mouse_genomes_project 11 70885487 70886582 + MGP_LPJ_P0029979 Tmem256 protein_coding protein_coding MGP_LPJ_T0029980.1 MGP_LPJ_G0018465.1 mouse_genomes_project 11 70885518 70886411 + Tmem256 protein_coding processed_transcript MGP_LPJ_T0029981.1 MGP_LPJ_G0018465.1 mouse_genomes_project 11 70885526 70886576 + Tmem256 protein_coding processed_transcript MGP_LPJ_T0029982.1 MGP_LPJ_G0018465.1 mouse_genomes_project 11 70885601 70886537 + Tmem256 protein_coding processed_transcript MGP_LPJ_T0032448.1 MGP_LPJ_G0019097.1 mouse_genomes_project 11 104723618 104732447 + MGP_LPJ_P0032448 Aoc3 protein_coding protein_coding MGP_LPJ_T0032449.1 MGP_LPJ_G0019097.1 mouse_genomes_project 11 104724082 104734681 + MGP_LPJ_P0032449 Aoc3 protein_coding protein_coding MGP_LPJ_T0034144.1 MGP_LPJ_G0019439.1 mouse_genomes_project 11 125864056 125873765 - MGP_LPJ_P0034144 Sectm1b protein_coding protein_coding MGP_LPJ_T0034145.1 MGP_LPJ_G0019439.1 mouse_genomes_project 11 125865129 125873734 - MGP_LPJ_P0034145 Sectm1b protein_coding protein_coding MGP_LPJ_T0034146.1 MGP_LPJ_G0019439.1 mouse_genomes_project 11 125865134 125866929 - MGP_LPJ_P0034146 Sectm1b protein_coding protein_coding MGP_LPJ_T0034147.1 MGP_LPJ_G0019439.1 mouse_genomes_project 11 125865153 125873741 - MGP_LPJ_P0034147 Sectm1b protein_coding protein_coding MGP_LPJ_T0034148.1 MGP_LPJ_G0019439.1 mouse_genomes_project 11 125865522 125873651 - MGP_LPJ_P0034148 Sectm1b protein_coding protein_coding MGP_LPJ_T0034149.1 MGP_LPJ_G0019439.1 mouse_genomes_project 11 125865977 125873499 - Sectm1b protein_coding retained_intron MGP_LPJ_T0034150.1 MGP_LPJ_G0019439.1 mouse_genomes_project 11 125866799 125867194 - Sectm1b protein_coding processed_transcript MGP_LPJ_T0009710.1 MGP_LPJ_G0007828.1 mouse_genomes_project 11 70656456 70656576 - Mir467f miRNA miRNA MGP_LPJ_T0030670.1 MGP_LPJ_G0018626.1 mouse_genomes_project 11 77125822 77154483 - MGP_LPJ_P0030670 Doc2b protein_coding protein_coding MGP_LPJ_T0030467.1 MGP_LPJ_G0018565.1 mouse_genomes_project 11 74506814 74527164 - MGP_LPJ_P0030467 Aspa protein_coding protein_coding MGP_LPJ_T0030468.1 MGP_LPJ_G0018565.1 mouse_genomes_project 11 74506814 74532089 - MGP_LPJ_P0030468 Aspa protein_coding protein_coding MGP_LPJ_T0030469.1 MGP_LPJ_G0018565.1 mouse_genomes_project 11 74515379 74528989 - MGP_LPJ_P0030469 Aspa protein_coding protein_coding MGP_LPJ_T0030470.1 MGP_LPJ_G0018565.1 mouse_genomes_project 11 74518544 74526867 - Aspa protein_coding retained_intron MGP_LPJ_T0030471.1 MGP_LPJ_G0018565.1 mouse_genomes_project 11 74522376 74529319 - MGP_LPJ_P0030471 Aspa protein_coding protein_coding MGP_LPJ_T0030472.1 MGP_LPJ_G0018565.1 mouse_genomes_project 11 74524761 74527144 - MGP_LPJ_P0030472 Aspa protein_coding nonsense_mediated_decay MGP_LPJ_T0029236.1 MGP_LPJ_G0018298.1 mouse_genomes_project 11 59587364 59595072 - MGP_LPJ_P0029236 Gjc2 protein_coding protein_coding MGP_LPJ_T0029237.1 MGP_LPJ_G0018298.1 mouse_genomes_project 11 59587364 59595459 - MGP_LPJ_P0029237 Gjc2 protein_coding protein_coding MGP_LPJ_T0030734.1 MGP_LPJ_G0018641.1 mouse_genomes_project 11 78165637 78203300 - MGP_LPJ_P0030734 Gosr1 protein_coding protein_coding MGP_LPJ_T0030735.1 MGP_LPJ_G0018641.1 mouse_genomes_project 11 78188257 78203288 - Gosr1 protein_coding processed_transcript MGP_LPJ_T0033285.1 MGP_LPJ_G0019276.1 mouse_genomes_project 11 119563929 119568524 - MGP_LPJ_P0033285 Nat9 protein_coding protein_coding MGP_LPJ_T0033286.1 MGP_LPJ_G0019276.1 mouse_genomes_project 11 119563929 119569013 - MGP_LPJ_P0033286 Nat9 protein_coding protein_coding MGP_LPJ_T0033287.1 MGP_LPJ_G0019276.1 mouse_genomes_project 11 119563929 119568501 - MGP_LPJ_P0033287 Nat9 protein_coding protein_coding MGP_LPJ_T0033288.1 MGP_LPJ_G0019276.1 mouse_genomes_project 11 119563929 119568559 - MGP_LPJ_P0033288 Nat9 protein_coding protein_coding MGP_LPJ_T0033289.1 MGP_LPJ_G0019276.1 mouse_genomes_project 11 119565613 119568431 - Nat9 protein_coding processed_transcript MGP_LPJ_T0033290.1 MGP_LPJ_G0019276.1 mouse_genomes_project 11 119565717 119568250 - Nat9 protein_coding processed_transcript MGP_LPJ_T0033291.1 MGP_LPJ_G0019276.1 mouse_genomes_project 11 119565907 119569011 - Nat9 protein_coding processed_transcript MGP_LPJ_T0033292.1 MGP_LPJ_G0019276.1 mouse_genomes_project 11 119565908 119569028 - Nat9 protein_coding processed_transcript MGP_LPJ_T0033293.1 MGP_LPJ_G0019276.1 mouse_genomes_project 11 119566091 119568445 - Nat9 protein_coding processed_transcript MGP_LPJ_T0032742.1 MGP_LPJ_G0019151.1 mouse_genomes_project 11 106456214 106477437 - MGP_LPJ_P0032742 Kif18b protein_coding protein_coding MGP_LPJ_T0032743.1 MGP_LPJ_G0019151.1 mouse_genomes_project 11 106467666 106477401 - Kif18b protein_coding processed_transcript MGP_LPJ_T0012708.1 MGP_LPJ_G0010799.1 mouse_genomes_project 11 93234567 93236149 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012605.1 MGP_LPJ_G0010696.1 mouse_genomes_project 11 54894309 54894763 + processed_pseudogene processed_pseudogene MGP_LPJ_T0029683.1 MGP_LPJ_G0018395.1 mouse_genomes_project 11 68037536 68065035 + MGP_LPJ_P0029683 Myh1 protein_coding protein_coding MGP_LPJ_T0029684.1 MGP_LPJ_G0018395.1 mouse_genomes_project 11 68037595 68064957 + MGP_LPJ_P0029684 Myh1 protein_coding protein_coding MGP_LPJ_T0029685.1 MGP_LPJ_G0018395.1 mouse_genomes_project 11 68037622 68039740 + MGP_LPJ_P0029685 Myh1 protein_coding protein_coding MGP_LPJ_T0029686.1 MGP_LPJ_G0018395.1 mouse_genomes_project 11 68037890 68065033 + MGP_LPJ_P0029686 Myh1 protein_coding protein_coding MGP_LPJ_T0017156.1 MGP_LPJ_G0015099.1 mouse_genomes_project 11 76932570 76939625 - 4931413K12Rik processed_transcript processed_transcript MGP_LPJ_T0012538.1 MGP_LPJ_G0010629.1 mouse_genomes_project 11 27959300 27960895 - processed_pseudogene processed_pseudogene MGP_LPJ_T0030591.1 MGP_LPJ_G0018611.1 mouse_genomes_project 11 76627674 76680948 - MGP_LPJ_P0030591 Rpa1 protein_coding protein_coding MGP_LPJ_T0030592.1 MGP_LPJ_G0018611.1 mouse_genomes_project 11 76629858 76680934 - MGP_LPJ_P0030592 Rpa1 protein_coding protein_coding MGP_LPJ_T0030593.1 MGP_LPJ_G0018611.1 mouse_genomes_project 11 76630815 76674808 - Rpa1 protein_coding processed_transcript MGP_LPJ_T0030594.1 MGP_LPJ_G0018611.1 mouse_genomes_project 11 76646917 76680919 - Rpa1 protein_coding retained_intron MGP_LPJ_T0030595.1 MGP_LPJ_G0018611.1 mouse_genomes_project 11 76674597 76680917 - Rpa1 protein_coding processed_transcript MGP_LPJ_T0029378.1 MGP_LPJ_G0018331.1 mouse_genomes_project 11 61206811 61207410 - Flii protein_coding retained_intron MGP_LPJ_T0029379.1 MGP_LPJ_G0018331.1 mouse_genomes_project 11 61206831 61221175 - MGP_LPJ_P0029379 Flii protein_coding protein_coding MGP_LPJ_T0029380.1 MGP_LPJ_G0018331.1 mouse_genomes_project 11 61211915 61212830 - Flii protein_coding retained_intron MGP_LPJ_T0029381.1 MGP_LPJ_G0018331.1 mouse_genomes_project 11 61218276 61221135 - Flii protein_coding retained_intron MGP_LPJ_T0032028.1 MGP_LPJ_G0018961.1 mouse_genomes_project 11 101405337 101407075 + MGP_LPJ_P0032028 Pnmt protein_coding protein_coding MGP_LPJ_T0032029.1 MGP_LPJ_G0018961.1 mouse_genomes_project 11 101405599 101406370 + Pnmt protein_coding processed_transcript MGP_LPJ_T0012615.1 MGP_LPJ_G0010706.1 mouse_genomes_project 11 58642494 58643290 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101790.1 MGP_LPJ_G0039828.1 mouse_genomes_project 11 102894639 102894776 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0029067.1 MGP_LPJ_G0018231.1 mouse_genomes_project 11 54847343 54854468 + MGP_LPJ_P0029067 Gpx3 protein_coding protein_coding MGP_LPJ_T0029068.1 MGP_LPJ_G0018231.1 mouse_genomes_project 11 54847662 54855269 + MGP_LPJ_P0029068 Gpx3 protein_coding protein_coding MGP_LPJ_T0029069.1 MGP_LPJ_G0018231.1 mouse_genomes_project 11 54847816 54854426 + MGP_LPJ_P0029069 Gpx3 protein_coding protein_coding MGP_LPJ_T0033137.1 MGP_LPJ_G0019239.1 mouse_genomes_project 11 113635845 113640402 + Prkar1a protein_coding processed_transcript MGP_LPJ_T0033138.1 MGP_LPJ_G0019239.1 mouse_genomes_project 11 113635845 113655735 + MGP_LPJ_P0033138 Prkar1a protein_coding protein_coding MGP_LPJ_T0033139.1 MGP_LPJ_G0019239.1 mouse_genomes_project 11 113637015 113647835 + MGP_LPJ_P0033139 Prkar1a protein_coding protein_coding MGP_LPJ_T0033140.1 MGP_LPJ_G0019239.1 mouse_genomes_project 11 113637361 113655735 + MGP_LPJ_P0033140 Prkar1a protein_coding protein_coding MGP_LPJ_T0033141.1 MGP_LPJ_G0019239.1 mouse_genomes_project 11 113652022 113653055 + Prkar1a protein_coding processed_transcript MGP_LPJ_T0006216.1 MGP_LPJ_G0005193.1 mouse_genomes_project 11 22644140 22653867 - Gm10466 lincRNA lincRNA MGP_LPJ_T0030299.1 MGP_LPJ_G0018524.1 mouse_genomes_project 11 72124219 72133494 + MGP_LPJ_P0030299 Rpain protein_coding protein_coding MGP_LPJ_T0030300.1 MGP_LPJ_G0018524.1 mouse_genomes_project 11 72124233 72125926 + MGP_LPJ_P0030300 Rpain protein_coding nonsense_mediated_decay MGP_LPJ_T0030301.1 MGP_LPJ_G0018524.1 mouse_genomes_project 11 72124486 72129823 + Rpain protein_coding retained_intron MGP_LPJ_T0030302.1 MGP_LPJ_G0018524.1 mouse_genomes_project 11 72124492 72126356 + Rpain protein_coding retained_intron MGP_LPJ_T0030303.1 MGP_LPJ_G0018524.1 mouse_genomes_project 11 72124497 72127498 + Rpain protein_coding retained_intron MGP_LPJ_T0030304.1 MGP_LPJ_G0018524.1 mouse_genomes_project 11 72124513 72133348 + MGP_LPJ_P0030304 Rpain protein_coding protein_coding MGP_LPJ_T0030305.1 MGP_LPJ_G0018524.1 mouse_genomes_project 11 72124513 72133348 + MGP_LPJ_P0030305 Rpain protein_coding protein_coding MGP_LPJ_T0030306.1 MGP_LPJ_G0018524.1 mouse_genomes_project 11 72124513 72133348 + MGP_LPJ_P0030306 Rpain protein_coding nonsense_mediated_decay MGP_LPJ_T0030307.1 MGP_LPJ_G0018524.1 mouse_genomes_project 11 72124513 72133348 + MGP_LPJ_P0030307 Rpain protein_coding protein_coding MGP_LPJ_T0030308.1 MGP_LPJ_G0018524.1 mouse_genomes_project 11 72124513 72133348 + MGP_LPJ_P0030308 Rpain protein_coding protein_coding MGP_LPJ_T0030309.1 MGP_LPJ_G0018524.1 mouse_genomes_project 11 72124535 72130090 + Rpain protein_coding retained_intron MGP_LPJ_T0030310.1 MGP_LPJ_G0018524.1 mouse_genomes_project 11 72126809 72133466 + Rpain protein_coding retained_intron MGP_LPJ_T0030311.1 MGP_LPJ_G0018524.1 mouse_genomes_project 11 72130400 72133462 + Rpain protein_coding retained_intron MGP_LPJ_T0009761.1 MGP_LPJ_G0007879.1 mouse_genomes_project 11 104388498 104388568 + Mir6928 miRNA miRNA MGP_LPJ_T0033207.1 MGP_LPJ_G0019256.1 mouse_genomes_project 11 117969068 117981624 - MGP_LPJ_P0033207 Cpsf4l protein_coding protein_coding MGP_LPJ_T0033208.1 MGP_LPJ_G0019256.1 mouse_genomes_project 11 117969068 117981133 - MGP_LPJ_P0033208 Cpsf4l protein_coding protein_coding MGP_LPJ_T0033209.1 MGP_LPJ_G0019256.1 mouse_genomes_project 11 117969068 117980574 - MGP_LPJ_P0033209 Cpsf4l protein_coding protein_coding MGP_LPJ_T0033210.1 MGP_LPJ_G0019256.1 mouse_genomes_project 11 117969068 117981127 - MGP_LPJ_P0033210 Cpsf4l protein_coding protein_coding MGP_LPJ_T0033211.1 MGP_LPJ_G0019256.1 mouse_genomes_project 11 117973602 117981131 - Cpsf4l protein_coding retained_intron MGP_LPJ_T0098893.1 MGP_LPJ_G0037156.1 mouse_genomes_project 11 22473382 22473455 - Gm22787 snRNA snRNA MGP_LPJ_T0029042.1 MGP_LPJ_G0018226.1 mouse_genomes_project 11 54364056 54449311 + MGP_LPJ_P0029042 Fnip1 protein_coding protein_coding MGP_LPJ_T0029043.1 MGP_LPJ_G0018226.1 mouse_genomes_project 11 54394042 54431919 + MGP_LPJ_P0029043 Fnip1 protein_coding protein_coding MGP_LPJ_T0031345.1 MGP_LPJ_G0018791.1 mouse_genomes_project 11 88305849 88398837 - MGP_LPJ_P0031345 Med13 protein_coding protein_coding MGP_LPJ_T0031346.1 MGP_LPJ_G0018791.1 mouse_genomes_project 11 88311352 88317405 - Med13 protein_coding processed_transcript MGP_LPJ_T0031347.1 MGP_LPJ_G0018791.1 mouse_genomes_project 11 88314179 88317797 - Med13 protein_coding retained_intron MGP_LPJ_T0031348.1 MGP_LPJ_G0018791.1 mouse_genomes_project 11 88372230 88373408 - Med13 protein_coding retained_intron MGP_LPJ_T0033175.1 MGP_LPJ_G0019248.1 mouse_genomes_project 11 115043090 115107488 + MGP_LPJ_P0033175 Kcnj16 protein_coding protein_coding MGP_LPJ_T0033176.1 MGP_LPJ_G0019248.1 mouse_genomes_project 11 115043090 115107491 + MGP_LPJ_P0033176 Kcnj16 protein_coding protein_coding MGP_LPJ_T0033177.1 MGP_LPJ_G0019248.1 mouse_genomes_project 11 115043121 115104369 + MGP_LPJ_P0033177 Kcnj16 protein_coding protein_coding MGP_LPJ_T0033178.1 MGP_LPJ_G0019248.1 mouse_genomes_project 11 115073799 115107491 + MGP_LPJ_P0033178 Kcnj16 protein_coding protein_coding MGP_LPJ_T0033179.1 MGP_LPJ_G0019248.1 mouse_genomes_project 11 115103410 115104258 + MGP_LPJ_P0033179 Kcnj16 protein_coding protein_coding MGP_LPJ_T0033180.1 MGP_LPJ_G0019248.1 mouse_genomes_project 11 115103410 115107488 + MGP_LPJ_P0033180 Kcnj16 protein_coding protein_coding MGP_LPJ_T0028501.1 MGP_LPJ_G0018075.1 mouse_genomes_project 11 41047449 41108075 - MGP_LPJ_P0028501 Gabra1 protein_coding protein_coding MGP_LPJ_T0028502.1 MGP_LPJ_G0018075.1 mouse_genomes_project 11 41047449 41107308 - MGP_LPJ_P0028502 Gabra1 protein_coding protein_coding MGP_LPJ_T0028503.1 MGP_LPJ_G0018075.1 mouse_genomes_project 11 41052064 41104408 - MGP_LPJ_P0028503 Gabra1 protein_coding protein_coding MGP_LPJ_T0028504.1 MGP_LPJ_G0018075.1 mouse_genomes_project 11 41076071 41104521 - MGP_LPJ_P0028504 Gabra1 protein_coding protein_coding MGP_LPJ_T0028505.1 MGP_LPJ_G0018075.1 mouse_genomes_project 11 41099372 41108075 - MGP_LPJ_P0028505 Gabra1 protein_coding protein_coding MGP_LPJ_T0028506.1 MGP_LPJ_G0018075.1 mouse_genomes_project 11 41100678 41107605 - Gabra1 protein_coding processed_transcript MGP_LPJ_T0028507.1 MGP_LPJ_G0018075.1 mouse_genomes_project 11 41104124 41108055 - MGP_LPJ_P0028507 Gabra1 protein_coding protein_coding MGP_LPJ_T0031504.1 MGP_LPJ_G0018829.1 mouse_genomes_project 11 91100513 91122155 - MGP_LPJ_P0031504 Akap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0031505.1 MGP_LPJ_G0018829.1 mouse_genomes_project 11 91100513 91122155 - MGP_LPJ_P0031505 Akap1 protein_coding protein_coding MGP_LPJ_T0031506.1 MGP_LPJ_G0018829.1 mouse_genomes_project 11 91100513 91136088 - MGP_LPJ_P0031506 Akap1 protein_coding protein_coding MGP_LPJ_T0031507.1 MGP_LPJ_G0018829.1 mouse_genomes_project 11 91101477 91135219 - MGP_LPJ_P0031507 Akap1 protein_coding protein_coding MGP_LPJ_T0031508.1 MGP_LPJ_G0018829.1 mouse_genomes_project 11 91106670 91111199 - Akap1 protein_coding retained_intron MGP_LPJ_T0031509.1 MGP_LPJ_G0018829.1 mouse_genomes_project 11 91108625 91115176 - MGP_LPJ_P0031509 Akap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0012503.1 MGP_LPJ_G0010594.1 mouse_genomes_project 11 18151157 18152414 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003316.1 MGP_LPJ_G0003059.1 mouse_genomes_project 11 104013472 104024671 + Dhx58os antisense antisense MGP_LPJ_T0003231.1 MGP_LPJ_G0002995.1 mouse_genomes_project 11 68048856 68081833 - Gm12300 antisense antisense MGP_LPJ_T0003232.1 MGP_LPJ_G0002995.1 mouse_genomes_project 11 68064338 68071605 - Gm12300 antisense antisense MGP_LPJ_T0003233.1 MGP_LPJ_G0002995.1 mouse_genomes_project 11 68064655 68081541 - Gm12300 antisense antisense MGP_LPJ_T0012673.1 MGP_LPJ_G0010764.1 mouse_genomes_project 11 79117954 79118134 + processed_pseudogene processed_pseudogene MGP_LPJ_T0028662.1 MGP_LPJ_G0018123.1 mouse_genomes_project 11 48429563 48439333 - MGP_LPJ_P0028662 Tgtp2 protein_coding protein_coding MGP_LPJ_T0028961.1 MGP_LPJ_G0018209.1 mouse_genomes_project 11 53406208 53442778 + MGP_LPJ_P0028961 Kif3a protein_coding protein_coding MGP_LPJ_T0028962.1 MGP_LPJ_G0018209.1 mouse_genomes_project 11 53406208 53441873 + MGP_LPJ_P0028962 Kif3a protein_coding protein_coding MGP_LPJ_T0028963.1 MGP_LPJ_G0018209.1 mouse_genomes_project 11 53406226 53441870 + MGP_LPJ_P0028963 Kif3a protein_coding protein_coding MGP_LPJ_T0028964.1 MGP_LPJ_G0018209.1 mouse_genomes_project 11 53406355 53441827 + MGP_LPJ_P0028964 Kif3a protein_coding protein_coding MGP_LPJ_T0028965.1 MGP_LPJ_G0018209.1 mouse_genomes_project 11 53406545 53417967 + Kif3a protein_coding processed_transcript MGP_LPJ_T0028966.1 MGP_LPJ_G0018209.1 mouse_genomes_project 11 53406690 53418592 + MGP_LPJ_P0028966 Kif3a protein_coding protein_coding MGP_LPJ_T0028967.1 MGP_LPJ_G0018209.1 mouse_genomes_project 11 53417951 53426501 + MGP_LPJ_P0028967 Kif3a protein_coding nonsense_mediated_decay MGP_LPJ_T0028968.1 MGP_LPJ_G0018209.1 mouse_genomes_project 11 53433555 53442068 + MGP_LPJ_P0028968 Kif3a protein_coding protein_coding MGP_LPJ_T0033839.1 MGP_LPJ_G0019381.1 mouse_genomes_project 11 123983319 123990316 - MGP_LPJ_P0033839 Gm8994 protein_coding protein_coding MGP_LPJ_T0003383.1 MGP_LPJ_G0003115.1 mouse_genomes_project 11 125429333 125438690 + Myadml2os antisense antisense MGP_LPJ_T0027953.1 MGP_LPJ_G0017943.1 mouse_genomes_project 11 4451908 4456625 + MGP_LPJ_P0027953 Igfbp1 protein_coding protein_coding MGP_LPJ_T0012540.1 MGP_LPJ_G0010631.1 mouse_genomes_project 11 28272206 28273022 + processed_pseudogene processed_pseudogene MGP_LPJ_T0030702.1 MGP_LPJ_G0018634.1 mouse_genomes_project 11 77615136 77616197 + MGP_LPJ_P0030702 Dbil5 protein_coding protein_coding MGP_LPJ_T0101253.1 MGP_LPJ_G0039496.1 mouse_genomes_project 11 108203420 108204750 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0017161.1 MGP_LPJ_G0015103.1 mouse_genomes_project 11 85170035 85172942 + AA465934 processed_transcript antisense MGP_LPJ_T0017162.1 MGP_LPJ_G0015103.1 mouse_genomes_project 11 85170056 85172943 + AA465934 processed_transcript antisense MGP_LPJ_T0017163.1 MGP_LPJ_G0015103.1 mouse_genomes_project 11 85170064 85170618 + AA465934 processed_transcript retained_intron MGP_LPJ_T0017164.1 MGP_LPJ_G0015103.1 mouse_genomes_project 11 85170078 85172940 + AA465934 processed_transcript antisense MGP_LPJ_T0017165.1 MGP_LPJ_G0015103.1 mouse_genomes_project 11 85170079 85172941 + AA465934 processed_transcript retained_intron MGP_LPJ_T0028973.1 MGP_LPJ_G0018211.1 mouse_genomes_project 11 53482867 53486256 - MGP_LPJ_P0028973 Il13 protein_coding protein_coding MGP_LPJ_T0028997.1 MGP_LPJ_G0018217.1 mouse_genomes_project 11 53752424 53774540 - MGP_LPJ_P0028997 protein_coding nonsense_mediated_decay MGP_LPJ_T0009708.1 MGP_LPJ_G0007826.1 mouse_genomes_project 11 69972185 69972290 - Mir3062 miRNA miRNA MGP_LPJ_T0030404.1 MGP_LPJ_G0018548.1 mouse_genomes_project 11 73751889 73839451 + MGP_LPJ_P0030404 Ube2g1 protein_coding protein_coding MGP_LPJ_T0030405.1 MGP_LPJ_G0018548.1 mouse_genomes_project 11 73751889 73839451 + MGP_LPJ_P0030405 Ube2g1 protein_coding protein_coding MGP_LPJ_T0030406.1 MGP_LPJ_G0018548.1 mouse_genomes_project 11 73751925 73833111 + Ube2g1 protein_coding retained_intron MGP_LPJ_T0031664.1 MGP_LPJ_G0018867.1 mouse_genomes_project 11 97280075 97295564 + MGP_LPJ_P0031664 Lrrc59 protein_coding protein_coding MGP_LPJ_T0031665.1 MGP_LPJ_G0018867.1 mouse_genomes_project 11 97280122 97285598 + Lrrc59 protein_coding retained_intron MGP_LPJ_T0012700.1 MGP_LPJ_G0010791.1 mouse_genomes_project 11 89396510 89396782 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098892.1 MGP_LPJ_G0037155.1 mouse_genomes_project 11 21638891 21639036 - Gm23827 snRNA snRNA MGP_LPJ_T0033552.1 MGP_LPJ_G0019323.1 mouse_genomes_project 11 120726797 120755841 - Srp68 protein_coding processed_transcript MGP_LPJ_T0033553.1 MGP_LPJ_G0019323.1 mouse_genomes_project 11 120726797 120755841 - MGP_LPJ_P0033553 Srp68 protein_coding protein_coding MGP_LPJ_T0033554.1 MGP_LPJ_G0019323.1 mouse_genomes_project 11 120726797 120755759 - MGP_LPJ_P0033554 Srp68 protein_coding protein_coding MGP_LPJ_T0033555.1 MGP_LPJ_G0019323.1 mouse_genomes_project 11 120730418 120742970 - Srp68 protein_coding processed_transcript MGP_LPJ_T0009667.1 MGP_LPJ_G0007785.1 mouse_genomes_project 11 14179267 14179368 - Gm24714 miRNA miRNA MGP_LPJ_T0031798.1 MGP_LPJ_G0018907.1 mouse_genomes_project 11 99135954 99139450 + MGP_LPJ_P0031798 Hoxb7 protein_coding protein_coding MGP_LPJ_T0031799.1 MGP_LPJ_G0018907.1 mouse_genomes_project 11 99138046 99138781 + Hoxb7 protein_coding processed_transcript MGP_LPJ_T0006274.1 MGP_LPJ_G0005242.1 mouse_genomes_project 11 63809489 63826032 + B430319H21Rik lincRNA lincRNA MGP_LPJ_T0030940.1 MGP_LPJ_G0018682.1 mouse_genomes_project 11 79928571 79953722 - MGP_LPJ_P0030940 Slc13a2 protein_coding protein_coding MGP_LPJ_T0030695.1 MGP_LPJ_G0018632.1 mouse_genomes_project 11 77573574 77612368 + Fam57a protein_coding processed_transcript MGP_LPJ_T0030696.1 MGP_LPJ_G0018632.1 mouse_genomes_project 11 77596894 77597856 + Fam57a protein_coding retained_intron MGP_LPJ_T0030697.1 MGP_LPJ_G0018632.1 mouse_genomes_project 11 77596931 77605800 + MGP_LPJ_P0030697 Fam57a protein_coding protein_coding MGP_LPJ_T0030698.1 MGP_LPJ_G0018632.1 mouse_genomes_project 11 77596964 77605948 + MGP_LPJ_P0030698 Fam57a protein_coding protein_coding MGP_LPJ_T0029695.1 MGP_LPJ_G0018398.1 mouse_genomes_project 11 68314999 68538014 + Gas7 protein_coding processed_transcript MGP_LPJ_T0029696.1 MGP_LPJ_G0018398.1 mouse_genomes_project 11 68414185 68452233 + Gas7 protein_coding processed_transcript MGP_LPJ_T0029697.1 MGP_LPJ_G0018398.1 mouse_genomes_project 11 68453200 68472093 + Gas7 protein_coding processed_transcript MGP_LPJ_T0029698.1 MGP_LPJ_G0018398.1 mouse_genomes_project 11 68453236 68574448 + MGP_LPJ_P0029698 Gas7 protein_coding protein_coding MGP_LPJ_T0029699.1 MGP_LPJ_G0018398.1 mouse_genomes_project 11 68463202 68567017 + MGP_LPJ_P0029699 Gas7 protein_coding unknown_likely_coding MGP_LPJ_T0029700.1 MGP_LPJ_G0018398.1 mouse_genomes_project 11 68463236 68543235 + Gas7 protein_coding processed_transcript MGP_LPJ_T0029701.1 MGP_LPJ_G0018398.1 mouse_genomes_project 11 68463246 68537999 + Gas7 protein_coding processed_transcript MGP_LPJ_T0029702.1 MGP_LPJ_G0018398.1 mouse_genomes_project 11 68523951 68567254 + Gas7 protein_coding processed_transcript MGP_LPJ_T0029704.1 MGP_LPJ_G0018398.1 mouse_genomes_project 11 68565737 68567130 + Gas7 protein_coding processed_transcript MGP_LPJ_T0003345.1 MGP_LPJ_G0003086.1 mouse_genomes_project 11 111876705 111877313 + Gm11657 antisense antisense MGP_LPJ_T0006323.1 MGP_LPJ_G0005277.1 mouse_genomes_project 11 89879258 89880962 + Mir142hg lincRNA lincRNA MGP_LPJ_T0030799.1 MGP_LPJ_G0018656.1 mouse_genomes_project 11 79176773 79205901 + MGP_LPJ_P0030799 Nufip2 protein_coding protein_coding MGP_LPJ_T0030800.1 MGP_LPJ_G0018656.1 mouse_genomes_project 11 79176790 79238788 + MGP_LPJ_P0030800 Nufip2 protein_coding protein_coding MGP_LPJ_T0031920.1 MGP_LPJ_G0018936.1 mouse_genomes_project 11 100433396 100442938 - MGP_LPJ_P0031920 4933428G20Rik protein_coding protein_coding MGP_LPJ_T0003354.1 MGP_LPJ_G0003092.1 mouse_genomes_project 11 113759579 113761677 + Gm11684 antisense antisense MGP_LPJ_T0030184.1 MGP_LPJ_G0018503.1 mouse_genomes_project 11 71612485 71620314 + MGP_LPJ_P0030184 Tm4sf5 protein_coding protein_coding MGP_LPJ_T0030185.1 MGP_LPJ_G0018503.1 mouse_genomes_project 11 71619105 71620018 + Tm4sf5 protein_coding processed_transcript MGP_LPJ_T0030186.1 MGP_LPJ_G0018503.1 mouse_genomes_project 11 71619341 71620103 + Tm4sf5 protein_coding retained_intron MGP_LPJ_T0031331.1 MGP_LPJ_G0018789.1 mouse_genomes_project 11 88096465 88239561 - MGP_LPJ_P0031331 Brip1 protein_coding protein_coding MGP_LPJ_T0031332.1 MGP_LPJ_G0018789.1 mouse_genomes_project 11 88233403 88239532 - Brip1 protein_coding processed_transcript MGP_LPJ_T0031333.1 MGP_LPJ_G0018789.1 mouse_genomes_project 11 88234069 88239534 - Brip1 protein_coding processed_transcript MGP_LPJ_T0003278.1 MGP_LPJ_G0003032.1 mouse_genomes_project 11 91122255 91154508 + 4930556N13Rik antisense antisense MGP_LPJ_T0009784.1 MGP_LPJ_G0007902.1 mouse_genomes_project 11 124100952 124101042 + Mir1932 miRNA miRNA MGP_LPJ_T0100184.1 MGP_LPJ_G0038447.1 mouse_genomes_project 11 110240138 110240271 + Gm22711 snoRNA snoRNA MGP_LPJ_T0006300.1 MGP_LPJ_G0005262.1 mouse_genomes_project 11 78019461 78027197 + Gm26780 lincRNA lincRNA MGP_LPJ_T0009705.1 MGP_LPJ_G0007823.1 mouse_genomes_project 11 66468305 66468405 - Mir744 miRNA miRNA MGP_LPJ_T0033008.1 MGP_LPJ_G0019214.1 mouse_genomes_project 11 110551652 110564287 - MGP_LPJ_P0033008 Polg2 protein_coding protein_coding MGP_LPJ_T0033009.1 MGP_LPJ_G0019214.1 mouse_genomes_project 11 110551652 110564309 - MGP_LPJ_P0033009 Polg2 protein_coding nonsense_mediated_decay MGP_LPJ_T0033010.1 MGP_LPJ_G0019214.1 mouse_genomes_project 11 110552132 110564245 - MGP_LPJ_P0033010 Polg2 protein_coding nonsense_mediated_decay MGP_LPJ_T0033011.1 MGP_LPJ_G0019214.1 mouse_genomes_project 11 110554443 110564245 - MGP_LPJ_P0033011 Polg2 protein_coding nonsense_mediated_decay MGP_LPJ_T0033012.1 MGP_LPJ_G0019214.1 mouse_genomes_project 11 110555940 110557149 - Polg2 protein_coding retained_intron MGP_LPJ_T0033013.1 MGP_LPJ_G0019214.1 mouse_genomes_project 11 110558813 110564274 - MGP_LPJ_P0033013 Polg2 protein_coding nonsense_mediated_decay MGP_LPJ_T0101484.1 MGP_LPJ_G0039628.1 mouse_genomes_project 11 75476220 75520351 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101485.1 MGP_LPJ_G0039628.1 mouse_genomes_project 11 75476695 75477631 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0012530.1 MGP_LPJ_G0010621.1 mouse_genomes_project 11 25540846 25541322 - processed_pseudogene processed_pseudogene MGP_LPJ_T0033151.1 MGP_LPJ_G0019243.1 mouse_genomes_project 11 114027863 114109012 - MGP_LPJ_P0033151 Abca8a protein_coding protein_coding MGP_LPJ_T0033152.1 MGP_LPJ_G0019243.1 mouse_genomes_project 11 114027865 114108971 - MGP_LPJ_P0033152 Abca8a protein_coding protein_coding MGP_LPJ_T0033153.1 MGP_LPJ_G0019243.1 mouse_genomes_project 11 114027865 114108971 - MGP_LPJ_P0033153 Abca8a protein_coding protein_coding MGP_LPJ_T0033154.1 MGP_LPJ_G0019243.1 mouse_genomes_project 11 114029077 114032311 - Abca8a protein_coding processed_transcript MGP_LPJ_T0033155.1 MGP_LPJ_G0019243.1 mouse_genomes_project 11 114076026 114078527 - Abca8a protein_coding processed_transcript MGP_LPJ_T0033156.1 MGP_LPJ_G0019243.1 mouse_genomes_project 11 114081836 114083421 - Abca8a protein_coding processed_transcript MGP_LPJ_T0033157.1 MGP_LPJ_G0019243.1 mouse_genomes_project 11 114083354 114088699 - MGP_LPJ_P0033157 Abca8a protein_coding protein_coding MGP_LPJ_T0033158.1 MGP_LPJ_G0019243.1 mouse_genomes_project 11 114097205 114108971 - MGP_LPJ_P0033158 Abca8a protein_coding protein_coding MGP_LPJ_T0030435.1 MGP_LPJ_G0018554.1 mouse_genomes_project 11 74180471 74204429 + Camkk1 protein_coding retained_intron MGP_LPJ_T0030436.1 MGP_LPJ_G0018554.1 mouse_genomes_project 11 74180506 74204440 + MGP_LPJ_P0030436 Camkk1 protein_coding protein_coding MGP_LPJ_T0030437.1 MGP_LPJ_G0018554.1 mouse_genomes_project 11 74188048 74202659 + MGP_LPJ_P0030437 Camkk1 protein_coding protein_coding MGP_LPJ_T0030152.1 MGP_LPJ_G0018495.1 mouse_genomes_project 11 71331682 71347080 - MGP_LPJ_P0030152 Alox12 protein_coding protein_coding MGP_LPJ_T0030153.1 MGP_LPJ_G0018495.1 mouse_genomes_project 11 71340691 71347068 - MGP_LPJ_P0030153 Alox12 protein_coding protein_coding MGP_LPJ_T0009729.1 MGP_LPJ_G0007847.1 mouse_genomes_project 11 76892842 76892925 + Mir3971 miRNA miRNA MGP_LPJ_T0006224.1 MGP_LPJ_G0005197.1 mouse_genomes_project 11 26923549 26936628 + 2810471M01Rik lincRNA lincRNA MGP_LPJ_T0003194.1 MGP_LPJ_G0002964.1 mouse_genomes_project 11 55779710 56107327 + antisense antisense MGP_LPJ_T0031384.1 MGP_LPJ_G0018799.1 mouse_genomes_project 11 88987802 89050329 - MGP_LPJ_P0031384 Ypel2 protein_coding protein_coding MGP_LPJ_T0029741.1 MGP_LPJ_G0018409.1 mouse_genomes_project 11 69478435 69480495 + MGP_LPJ_P0029741 Mfsd6l protein_coding protein_coding MGP_LPJ_T0033580.1 MGP_LPJ_G0019328.1 mouse_genomes_project 11 120925963 120934324 + MGP_LPJ_P0033580 Ubald2 protein_coding protein_coding MGP_LPJ_T0033581.1 MGP_LPJ_G0019328.1 mouse_genomes_project 11 120927481 120931540 + Ubald2 protein_coding processed_transcript MGP_LPJ_T0012603.1 MGP_LPJ_G0010694.1 mouse_genomes_project 11 54117073 54117333 + processed_pseudogene processed_pseudogene MGP_LPJ_T0031438.1 MGP_LPJ_G0018813.1 mouse_genomes_project 11 89859788 89867272 + MGP_LPJ_P0031438 Supt4a protein_coding nonsense_mediated_decay MGP_LPJ_T0031439.1 MGP_LPJ_G0018813.1 mouse_genomes_project 11 89859789 89867272 + MGP_LPJ_P0031439 Supt4a protein_coding nonsense_mediated_decay MGP_LPJ_T0031440.1 MGP_LPJ_G0018813.1 mouse_genomes_project 11 89859836 89866969 + MGP_LPJ_P0031440 Supt4a protein_coding protein_coding MGP_LPJ_T0031385.1 MGP_LPJ_G0018800.1 mouse_genomes_project 11 89096082 89141738 - MGP_LPJ_P0031385 Gdpd1 protein_coding protein_coding MGP_LPJ_T0012771.1 MGP_LPJ_G0010862.1 mouse_genomes_project 11 120090949 120091018 - processed_pseudogene processed_pseudogene MGP_LPJ_T0033908.1 MGP_LPJ_G0019394.1 mouse_genomes_project 11 124834904 124843120 - MGP_LPJ_P0033908 Enthd2 protein_coding protein_coding MGP_LPJ_T0033909.1 MGP_LPJ_G0019394.1 mouse_genomes_project 11 124834904 124843120 - MGP_LPJ_P0033909 Enthd2 protein_coding protein_coding MGP_LPJ_T0033910.1 MGP_LPJ_G0019394.1 mouse_genomes_project 11 124834904 124843120 - MGP_LPJ_P0033910 Enthd2 protein_coding protein_coding MGP_LPJ_T0033911.1 MGP_LPJ_G0019394.1 mouse_genomes_project 11 124838533 124841774 - Enthd2 protein_coding processed_transcript MGP_LPJ_T0033912.1 MGP_LPJ_G0019394.1 mouse_genomes_project 11 124839918 124841649 - Enthd2 protein_coding processed_transcript MGP_LPJ_T0033913.1 MGP_LPJ_G0019394.1 mouse_genomes_project 11 124841287 124843089 - Enthd2 protein_coding processed_transcript MGP_LPJ_T0029923.1 MGP_LPJ_G0018450.1 mouse_genomes_project 11 70688182 70690123 - MGP_LPJ_P0029923 Cd68 protein_coding protein_coding MGP_LPJ_T0029924.1 MGP_LPJ_G0018450.1 mouse_genomes_project 11 70688275 70690032 - Cd68 protein_coding processed_transcript MGP_LPJ_T0029925.1 MGP_LPJ_G0018450.1 mouse_genomes_project 11 70688340 70690032 - MGP_LPJ_P0029925 Cd68 protein_coding protein_coding MGP_LPJ_T0029290.1 MGP_LPJ_G0018315.1 mouse_genomes_project 11 60240267 60259551 - MGP_LPJ_P0029290 Flcn protein_coding protein_coding MGP_LPJ_T0029291.1 MGP_LPJ_G0018315.1 mouse_genomes_project 11 60240316 60259459 - Flcn protein_coding retained_intron MGP_LPJ_T0029292.1 MGP_LPJ_G0018315.1 mouse_genomes_project 11 60240649 60259123 - MGP_LPJ_P0029292 Flcn protein_coding protein_coding MGP_LPJ_T0029293.1 MGP_LPJ_G0018315.1 mouse_genomes_project 11 60253293 60259136 - Flcn protein_coding processed_transcript MGP_LPJ_T0029294.1 MGP_LPJ_G0018315.1 mouse_genomes_project 11 60254056 60259529 - MGP_LPJ_P0029294 Flcn protein_coding protein_coding MGP_LPJ_T0029295.1 MGP_LPJ_G0018315.1 mouse_genomes_project 11 60258562 60259246 - Flcn protein_coding retained_intron MGP_LPJ_T0031929.1 MGP_LPJ_G0018939.1 mouse_genomes_project 11 100616483 100644508 + MGP_LPJ_P0031929 Mllt6 protein_coding protein_coding MGP_LPJ_T0031930.1 MGP_LPJ_G0018939.1 mouse_genomes_project 11 100622304 100641591 + Mllt6 protein_coding processed_transcript MGP_LPJ_T0031931.1 MGP_LPJ_G0018939.1 mouse_genomes_project 11 100622350 100630886 + Mllt6 protein_coding processed_transcript MGP_LPJ_T0031932.1 MGP_LPJ_G0018939.1 mouse_genomes_project 11 100633389 100635704 + Mllt6 protein_coding processed_transcript MGP_LPJ_T0031933.1 MGP_LPJ_G0018939.1 mouse_genomes_project 11 100633389 100635704 + Mllt6 protein_coding processed_transcript MGP_LPJ_T0032142.1 MGP_LPJ_G0018987.1 mouse_genomes_project 11 102261071 102271999 - MGP_LPJ_P0032142 Ccr7 protein_coding protein_coding MGP_LPJ_T0029564.1 MGP_LPJ_G0018363.1 mouse_genomes_project 11 63047519 63108865 + MGP_LPJ_P0029564 Pigl protein_coding protein_coding MGP_LPJ_T0029565.1 MGP_LPJ_G0018363.1 mouse_genomes_project 11 63047712 63104288 + Pigl protein_coding processed_transcript MGP_LPJ_T0031231.1 MGP_LPJ_G0018768.1 mouse_genomes_project 11 85977505 85998345 - MGP_LPJ_P0031231 Dusp14 protein_coding protein_coding MGP_LPJ_T0031232.1 MGP_LPJ_G0018768.1 mouse_genomes_project 11 85977505 85997901 - MGP_LPJ_P0031232 Dusp14 protein_coding protein_coding MGP_LPJ_T0031233.1 MGP_LPJ_G0018768.1 mouse_genomes_project 11 85977509 85998123 - MGP_LPJ_P0031233 Dusp14 protein_coding protein_coding MGP_LPJ_T0031234.1 MGP_LPJ_G0018768.1 mouse_genomes_project 11 85977878 85996624 - MGP_LPJ_P0031234 Dusp14 protein_coding protein_coding MGP_LPJ_T0031235.1 MGP_LPJ_G0018768.1 mouse_genomes_project 11 85978444 85998805 - MGP_LPJ_P0031235 Dusp14 protein_coding protein_coding MGP_LPJ_T0029274.1 MGP_LPJ_G0018310.1 mouse_genomes_project 11 59984112 60011018 + MGP_LPJ_P0029274 Nlrp3 protein_coding protein_coding MGP_LPJ_T0029275.1 MGP_LPJ_G0018310.1 mouse_genomes_project 11 59985230 60011021 + MGP_LPJ_P0029275 Nlrp3 protein_coding protein_coding MGP_LPJ_T0029276.1 MGP_LPJ_G0018310.1 mouse_genomes_project 11 59985300 59991393 + MGP_LPJ_P0029276 Nlrp3 protein_coding protein_coding MGP_LPJ_T0030449.1 MGP_LPJ_G0018560.1 mouse_genomes_project 11 74372929 74378836 + MGP_LPJ_P0030449 Tax1bp3 protein_coding protein_coding MGP_LPJ_T0030450.1 MGP_LPJ_G0018560.1 mouse_genomes_project 11 74373097 74376532 + Tax1bp3 protein_coding processed_transcript MGP_LPJ_T0030451.1 MGP_LPJ_G0018560.1 mouse_genomes_project 11 74373097 74379846 + Tax1bp3 protein_coding retained_intron MGP_LPJ_T0030452.1 MGP_LPJ_G0018560.1 mouse_genomes_project 11 74373116 74378731 + MGP_LPJ_P0030452 Tax1bp3 protein_coding protein_coding MGP_LPJ_T0100154.1 MGP_LPJ_G0038417.1 mouse_genomes_project 11 70065959 70066094 + Snord118 snoRNA snoRNA MGP_LPJ_T0032182.1 MGP_LPJ_G0019016.1 mouse_genomes_project 11 102836813 102837825 - MGP_LPJ_P0032182 Gm11563 protein_coding protein_coding MGP_LPJ_T0009672.1 MGP_LPJ_G0007790.1 mouse_genomes_project 11 22602768 22602912 - Gm25507 miRNA miRNA MGP_LPJ_T0100135.1 MGP_LPJ_G0038398.1 mouse_genomes_project 11 25090091 25090210 - Gm24850 snoRNA snoRNA MGP_LPJ_T0017110.1 MGP_LPJ_G0015072.1 mouse_genomes_project 11 20681642 20683968 + 9130230N09Rik processed_transcript processed_transcript MGP_LPJ_T0032124.1 MGP_LPJ_G0018984.1 mouse_genomes_project 11 102082387 102118591 - MGP_LPJ_P0032124 Top2a protein_coding protein_coding MGP_LPJ_T0032125.1 MGP_LPJ_G0018984.1 mouse_genomes_project 11 102082515 102085169 - Top2a protein_coding processed_transcript MGP_LPJ_T0032126.1 MGP_LPJ_G0018984.1 mouse_genomes_project 11 102082911 102084815 - Top2a protein_coding processed_transcript MGP_LPJ_T0032127.1 MGP_LPJ_G0018984.1 mouse_genomes_project 11 102083248 102118468 - MGP_LPJ_P0032127 Top2a protein_coding unknown_likely_coding MGP_LPJ_T0032128.1 MGP_LPJ_G0018984.1 mouse_genomes_project 11 102093071 102094385 - Top2a protein_coding processed_transcript MGP_LPJ_T0032129.1 MGP_LPJ_G0018984.1 mouse_genomes_project 11 102096748 102099356 - Top2a protein_coding processed_transcript MGP_LPJ_T0032130.1 MGP_LPJ_G0018984.1 mouse_genomes_project 11 102110958 102116616 - Top2a protein_coding processed_transcript MGP_LPJ_T0032131.1 MGP_LPJ_G0018984.1 mouse_genomes_project 11 102116490 102118580 - Top2a protein_coding processed_transcript MGP_LPJ_T0027723.1 MGP_LPJ_G0017892.1 mouse_genomes_project 11 1385818 1486269 - MGP_LPJ_P0027723 Hormad2 protein_coding protein_coding MGP_LPJ_T0027724.1 MGP_LPJ_G0017892.1 mouse_genomes_project 11 1385818 1486627 - MGP_LPJ_P0027724 Hormad2 protein_coding nonsense_mediated_decay MGP_LPJ_T0027725.1 MGP_LPJ_G0017892.1 mouse_genomes_project 11 1386387 1486606 - MGP_LPJ_P0027725 Hormad2 protein_coding protein_coding MGP_LPJ_T0027726.1 MGP_LPJ_G0017892.1 mouse_genomes_project 11 1469717 1472912 - Hormad2 protein_coding processed_transcript MGP_LPJ_T0027727.1 MGP_LPJ_G0017892.1 mouse_genomes_project 11 1469897 1486629 - MGP_LPJ_P0027727 Hormad2 protein_coding protein_coding MGP_LPJ_T0027728.1 MGP_LPJ_G0017892.1 mouse_genomes_project 11 1472963 1481362 - Hormad2 protein_coding processed_transcript MGP_LPJ_T0029886.1 MGP_LPJ_G0018441.1 mouse_genomes_project 11 70571318 70577434 - MGP_LPJ_P0029886 Efnb3 protein_coding protein_coding MGP_LPJ_T0029983.1 MGP_LPJ_G0018466.1 mouse_genomes_project 11 70896055 70900716 + MGP_LPJ_P0029983 Plscr3 protein_coding protein_coding MGP_LPJ_T0029984.1 MGP_LPJ_G0018466.1 mouse_genomes_project 11 70896296 70901738 + MGP_LPJ_P0029984 Plscr3 protein_coding protein_coding MGP_LPJ_T0029985.1 MGP_LPJ_G0018466.1 mouse_genomes_project 11 70896296 70898055 + MGP_LPJ_P0029985 Plscr3 protein_coding protein_coding MGP_LPJ_T0029986.1 MGP_LPJ_G0018466.1 mouse_genomes_project 11 70896355 70900723 + MGP_LPJ_P0029986 Plscr3 protein_coding protein_coding MGP_LPJ_T0027810.1 MGP_LPJ_G0017908.1 mouse_genomes_project 11 2208084 2234152 - MGP_LPJ_P0027810 Emid1 protein_coding protein_coding MGP_LPJ_T0027811.1 MGP_LPJ_G0017908.1 mouse_genomes_project 11 2208084 2257022 - MGP_LPJ_P0027811 Emid1 protein_coding protein_coding MGP_LPJ_T0027812.1 MGP_LPJ_G0017908.1 mouse_genomes_project 11 2208085 2257005 - MGP_LPJ_P0027812 Emid1 protein_coding protein_coding MGP_LPJ_T0027813.1 MGP_LPJ_G0017908.1 mouse_genomes_project 11 2208090 2233025 - MGP_LPJ_P0027813 Emid1 protein_coding protein_coding MGP_LPJ_T0027814.1 MGP_LPJ_G0017908.1 mouse_genomes_project 11 2208464 2232616 - Emid1 protein_coding retained_intron MGP_LPJ_T0027815.1 MGP_LPJ_G0017908.1 mouse_genomes_project 11 2208726 2232437 - MGP_LPJ_P0027815 Emid1 protein_coding nonsense_mediated_decay MGP_LPJ_T0027816.1 MGP_LPJ_G0017908.1 mouse_genomes_project 11 2235348 2257002 - MGP_LPJ_P0027816 Emid1 protein_coding nonsense_mediated_decay MGP_LPJ_T0027817.1 MGP_LPJ_G0017908.1 mouse_genomes_project 11 2238777 2255049 - Emid1 protein_coding processed_transcript MGP_LPJ_T0030833.1 MGP_LPJ_G0018661.1 mouse_genomes_project 11 79433206 79481937 + MGP_LPJ_P0030833 Sez6 protein_coding protein_coding MGP_LPJ_T0030834.1 MGP_LPJ_G0018661.1 mouse_genomes_project 11 79433245 79481937 + Sez6 protein_coding retained_intron MGP_LPJ_T0030835.1 MGP_LPJ_G0018661.1 mouse_genomes_project 11 79433323 79466204 + Sez6 protein_coding retained_intron MGP_LPJ_T0030836.1 MGP_LPJ_G0018661.1 mouse_genomes_project 11 79433418 79481929 + MGP_LPJ_P0030836 Sez6 protein_coding protein_coding MGP_LPJ_T0030837.1 MGP_LPJ_G0018661.1 mouse_genomes_project 11 79433445 79480950 + Sez6 protein_coding retained_intron MGP_LPJ_T0030838.1 MGP_LPJ_G0018661.1 mouse_genomes_project 11 79453525 79456994 + Sez6 protein_coding processed_transcript MGP_LPJ_T0030839.1 MGP_LPJ_G0018661.1 mouse_genomes_project 11 79456082 79481937 + MGP_LPJ_P0030839 Sez6 protein_coding nonsense_mediated_decay MGP_LPJ_T0030840.1 MGP_LPJ_G0018661.1 mouse_genomes_project 11 79471880 79477377 + MGP_LPJ_P0030840 Sez6 protein_coding protein_coding MGP_LPJ_T0030841.1 MGP_LPJ_G0018661.1 mouse_genomes_project 11 79476061 79477263 + Sez6 protein_coding retained_intron MGP_LPJ_T0009700.1 MGP_LPJ_G0007818.1 mouse_genomes_project 11 60674762 60674828 - Mir6922 miRNA miRNA MGP_LPJ_T0028516.1 MGP_LPJ_G0018078.1 mouse_genomes_project 11 42024408 42025921 + MGP_LPJ_P0028516 Gm9972 protein_coding protein_coding MGP_LPJ_T0028046.1 MGP_LPJ_G0017964.1 mouse_genomes_project 11 14528367 14570602 - MGP_LPJ_P0028046 Plek protein_coding protein_coding MGP_LPJ_T0028047.1 MGP_LPJ_G0017964.1 mouse_genomes_project 11 14549077 14563700 - MGP_LPJ_P0028047 Plek protein_coding protein_coding MGP_LPJ_T0030194.1 MGP_LPJ_G0018507.1 mouse_genomes_project 11 71653391 71654512 + MGP_LPJ_P0030194 Pld2 protein_coding protein_coding MGP_LPJ_T0030195.1 MGP_LPJ_G0018507.1 mouse_genomes_project 11 71653633 71672894 + MGP_LPJ_P0030195 Pld2 protein_coding protein_coding MGP_LPJ_T0030196.1 MGP_LPJ_G0018507.1 mouse_genomes_project 11 71653670 71672894 + MGP_LPJ_P0030196 Pld2 protein_coding protein_coding MGP_LPJ_T0030197.1 MGP_LPJ_G0018507.1 mouse_genomes_project 11 71653683 71659721 + MGP_LPJ_P0030197 Pld2 protein_coding protein_coding MGP_LPJ_T0030198.1 MGP_LPJ_G0018507.1 mouse_genomes_project 11 71668784 71671887 + Pld2 protein_coding retained_intron MGP_LPJ_T0030199.1 MGP_LPJ_G0018507.1 mouse_genomes_project 11 71670425 71672011 + MGP_LPJ_P0030199 Pld2 protein_coding protein_coding MGP_LPJ_T0030200.1 MGP_LPJ_G0018507.1 mouse_genomes_project 11 71670590 71672261 + Pld2 protein_coding retained_intron MGP_LPJ_T0032390.1 MGP_LPJ_G0019087.1 mouse_genomes_project 11 104549219 104551669 - MGP_LPJ_P0032390 Ccr10 protein_coding protein_coding MGP_LPJ_T0029139.1 MGP_LPJ_G0018254.1 mouse_genomes_project 11 58329446 58378522 - MGP_LPJ_P0029139 Gemin5 protein_coding protein_coding MGP_LPJ_T0029140.1 MGP_LPJ_G0018254.1 mouse_genomes_project 11 58330734 58378522 - MGP_LPJ_P0029140 Gemin5 protein_coding protein_coding MGP_LPJ_T0029141.1 MGP_LPJ_G0018254.1 mouse_genomes_project 11 58330734 58378522 - MGP_LPJ_P0029141 Gemin5 protein_coding protein_coding MGP_LPJ_T0029142.1 MGP_LPJ_G0018254.1 mouse_genomes_project 11 58346355 58349022 - Gemin5 protein_coding processed_transcript MGP_LPJ_T0029143.1 MGP_LPJ_G0018254.1 mouse_genomes_project 11 58364355 58370748 - MGP_LPJ_P0029143 Gemin5 protein_coding protein_coding MGP_LPJ_T0029249.1 MGP_LPJ_G0018301.1 mouse_genomes_project 11 59625532 59627952 + MGP_LPJ_P0029249 2310033P09Rik protein_coding protein_coding MGP_LPJ_T0011316.1 MGP_LPJ_G0009434.1 mouse_genomes_project 11 53558496 53558806 + Gm22275 misc_RNA misc_RNA MGP_LPJ_T0031297.1 MGP_LPJ_G0018781.1 mouse_genomes_project 11 86971361 87127758 - MGP_LPJ_P0031297 Usp32 protein_coding protein_coding MGP_LPJ_T0031298.1 MGP_LPJ_G0018781.1 mouse_genomes_project 11 86972566 87021667 - MGP_LPJ_P0031298 Usp32 protein_coding nonsense_mediated_decay MGP_LPJ_T0031299.1 MGP_LPJ_G0018781.1 mouse_genomes_project 11 86973189 86975562 - MGP_LPJ_P0031299 Usp32 protein_coding protein_coding MGP_LPJ_T0031300.1 MGP_LPJ_G0018781.1 mouse_genomes_project 11 87019700 87032812 - MGP_LPJ_P0031300 Usp32 protein_coding protein_coding MGP_LPJ_T0031301.1 MGP_LPJ_G0018781.1 mouse_genomes_project 11 87029347 87035457 - MGP_LPJ_P0031301 Usp32 protein_coding nonsense_mediated_decay MGP_LPJ_T0031302.1 MGP_LPJ_G0018781.1 mouse_genomes_project 11 87040278 87043200 - Usp32 protein_coding retained_intron MGP_LPJ_T0031303.1 MGP_LPJ_G0018781.1 mouse_genomes_project 11 87064678 87127881 - Usp32 protein_coding processed_transcript MGP_LPJ_T0031304.1 MGP_LPJ_G0018781.1 mouse_genomes_project 11 87085783 87127688 - Usp32 protein_coding processed_transcript MGP_LPJ_T0031305.1 MGP_LPJ_G0018781.1 mouse_genomes_project 11 87089882 87127649 - Usp32 protein_coding retained_intron MGP_LPJ_T0033149.1 MGP_LPJ_G0019242.1 mouse_genomes_project 11 113934064 114004982 - MGP_LPJ_P0033149 Abca8b protein_coding protein_coding MGP_LPJ_T0033150.1 MGP_LPJ_G0019242.1 mouse_genomes_project 11 113936147 114004880 - MGP_LPJ_P0033150 Abca8b protein_coding protein_coding MGP_LPJ_T0017200.1 MGP_LPJ_G0015125.1 mouse_genomes_project 11 107315988 107316573 + Gm11642 processed_transcript processed_transcript MGP_LPJ_T0031386.1 MGP_LPJ_G0018801.1 mouse_genomes_project 11 89145408 89160275 - MGP_LPJ_P0031386 Smg8 protein_coding protein_coding MGP_LPJ_T0031387.1 MGP_LPJ_G0018801.1 mouse_genomes_project 11 89145412 89158883 - MGP_LPJ_P0031387 Smg8 protein_coding protein_coding MGP_LPJ_T0033100.1 MGP_LPJ_G0019230.1 mouse_genomes_project 11 112849500 112853549 + MGP_LPJ_P0033100 Axin2 protein_coding protein_coding MGP_LPJ_T0033101.1 MGP_LPJ_G0019230.1 mouse_genomes_project 11 112850037 112853564 + MGP_LPJ_P0033101 Axin2 protein_coding protein_coding MGP_LPJ_T0033102.1 MGP_LPJ_G0019230.1 mouse_genomes_project 11 112850186 112880982 + MGP_LPJ_P0033102 Axin2 protein_coding unknown_likely_coding MGP_LPJ_T0033103.1 MGP_LPJ_G0019230.1 mouse_genomes_project 11 112850349 112853460 + MGP_LPJ_P0033103 Axin2 protein_coding protein_coding MGP_LPJ_T0033104.1 MGP_LPJ_G0019230.1 mouse_genomes_project 11 112853146 112881098 + MGP_LPJ_P0033104 Axin2 protein_coding protein_coding MGP_LPJ_T0033105.1 MGP_LPJ_G0019230.1 mouse_genomes_project 11 112868966 112873384 + Axin2 protein_coding processed_transcript MGP_LPJ_T0033106.1 MGP_LPJ_G0019230.1 mouse_genomes_project 11 112874170 112882370 + Axin2 protein_coding processed_transcript MGP_LPJ_T0033014.1 MGP_LPJ_G0019215.1 mouse_genomes_project 11 110565126 110573422 - MGP_LPJ_P0033014 Ddx5 protein_coding protein_coding MGP_LPJ_T0033015.1 MGP_LPJ_G0019215.1 mouse_genomes_project 11 110566319 110573384 - MGP_LPJ_P0033015 Ddx5 protein_coding nonsense_mediated_decay MGP_LPJ_T0033016.1 MGP_LPJ_G0019215.1 mouse_genomes_project 11 110567023 110568542 - Ddx5 protein_coding processed_transcript MGP_LPJ_T0033017.1 MGP_LPJ_G0019215.1 mouse_genomes_project 11 110567023 110573378 - MGP_LPJ_P0033017 Ddx5 protein_coding nonsense_mediated_decay MGP_LPJ_T0033018.1 MGP_LPJ_G0019215.1 mouse_genomes_project 11 110568194 110573357 - Ddx5 protein_coding processed_transcript MGP_LPJ_T0033019.1 MGP_LPJ_G0019215.1 mouse_genomes_project 11 110568623 110569937 - Ddx5 protein_coding retained_intron MGP_LPJ_T0033020.1 MGP_LPJ_G0019215.1 mouse_genomes_project 11 110570033 110570941 - Ddx5 protein_coding processed_transcript MGP_LPJ_T0033021.1 MGP_LPJ_G0019215.1 mouse_genomes_project 11 110570386 110574075 - MGP_LPJ_P0033021 Ddx5 protein_coding protein_coding MGP_LPJ_T0033022.1 MGP_LPJ_G0019215.1 mouse_genomes_project 11 110570961 110573773 - MGP_LPJ_P0033022 Ddx5 protein_coding protein_coding MGP_LPJ_T0012716.1 MGP_LPJ_G0010807.1 mouse_genomes_project 11 98531349 98531657 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000885.1 MGP_LPJ_G0000814.1 mouse_genomes_project 11 109660849 109662397 + TEC TEC MGP_LPJ_T0031950.1 MGP_LPJ_G0018944.1 mouse_genomes_project 11 100740754 100745015 - MGP_LPJ_P0031950 1700001P01Rik protein_coding protein_coding MGP_LPJ_T0033115.1 MGP_LPJ_G0019234.1 mouse_genomes_project 11 113380445 113388082 + MGP_LPJ_P0033115 9930022D16Rik protein_coding protein_coding MGP_LPJ_T0027971.1 MGP_LPJ_G0017950.1 mouse_genomes_project 11 6386244 6403372 + MGP_LPJ_P0027971 protein_coding protein_coding MGP_LPJ_T0027972.1 MGP_LPJ_G0017950.1 mouse_genomes_project 11 6386547 6401965 + MGP_LPJ_P0027972 protein_coding protein_coding MGP_LPJ_T0027973.1 MGP_LPJ_G0017950.1 mouse_genomes_project 11 6386626 6387673 + protein_coding retained_intron MGP_LPJ_T0027974.1 MGP_LPJ_G0017950.1 mouse_genomes_project 11 6386786 6401894 + MGP_LPJ_P0027974 protein_coding protein_coding MGP_LPJ_T0027975.1 MGP_LPJ_G0017950.1 mouse_genomes_project 11 6386948 6404816 + MGP_LPJ_P0027975 protein_coding unknown_likely_coding MGP_LPJ_T0027976.1 MGP_LPJ_G0017950.1 mouse_genomes_project 11 6394594 6403392 + MGP_LPJ_P0027976 protein_coding protein_coding MGP_LPJ_T0027977.1 MGP_LPJ_G0017950.1 mouse_genomes_project 11 6401657 6404725 + protein_coding retained_intron MGP_LPJ_T0028830.1 MGP_LPJ_G0018174.1 mouse_genomes_project 11 50902134 50913321 - MGP_LPJ_P0028830 BC049762 protein_coding protein_coding MGP_LPJ_T0028831.1 MGP_LPJ_G0018174.1 mouse_genomes_project 11 50902134 50913416 - MGP_LPJ_P0028831 BC049762 protein_coding protein_coding MGP_LPJ_T0031441.1 MGP_LPJ_G0018814.1 mouse_genomes_project 11 89884331 89910937 + MGP_LPJ_P0031441 Bzrap1 protein_coding protein_coding MGP_LPJ_T0031442.1 MGP_LPJ_G0018814.1 mouse_genomes_project 11 89884377 89910937 + MGP_LPJ_P0031442 Bzrap1 protein_coding protein_coding MGP_LPJ_T0031443.1 MGP_LPJ_G0018814.1 mouse_genomes_project 11 89889774 89891439 + Bzrap1 protein_coding processed_transcript MGP_LPJ_T0031444.1 MGP_LPJ_G0018814.1 mouse_genomes_project 11 89901118 89904527 + MGP_LPJ_P0031444 Bzrap1 protein_coding protein_coding MGP_LPJ_T0031445.1 MGP_LPJ_G0018814.1 mouse_genomes_project 11 89901525 89910937 + MGP_LPJ_P0031445 Bzrap1 protein_coding protein_coding MGP_LPJ_T0031446.1 MGP_LPJ_G0018814.1 mouse_genomes_project 11 89902083 89910937 + Bzrap1 protein_coding retained_intron MGP_LPJ_T0031447.1 MGP_LPJ_G0018814.1 mouse_genomes_project 11 89903781 89910937 + Bzrap1 protein_coding retained_intron MGP_LPJ_T0031448.1 MGP_LPJ_G0018814.1 mouse_genomes_project 11 89903940 89905278 + Bzrap1 protein_coding retained_intron MGP_LPJ_T0031449.1 MGP_LPJ_G0018814.1 mouse_genomes_project 11 89905284 89909750 + MGP_LPJ_P0031449 Bzrap1 protein_coding protein_coding MGP_LPJ_T0031450.1 MGP_LPJ_G0018814.1 mouse_genomes_project 11 89906565 89908203 + Bzrap1 protein_coding retained_intron MGP_LPJ_T0017145.1 MGP_LPJ_G0015093.1 mouse_genomes_project 11 68814553 68842606 + 9130017K11Rik processed_transcript processed_transcript MGP_LPJ_T0017146.1 MGP_LPJ_G0015093.1 mouse_genomes_project 11 68815425 68816842 + 9130017K11Rik processed_transcript processed_transcript MGP_LPJ_T0030732.1 MGP_LPJ_G0018639.1 mouse_genomes_project 11 78088271 78089478 + MGP_LPJ_P0030732 Bhlha9 protein_coding protein_coding MGP_LPJ_T0028757.1 MGP_LPJ_G0018152.1 mouse_genomes_project 11 49710647 49730831 + MGP_LPJ_P0028757 Mgat4b protein_coding protein_coding MGP_LPJ_T0028758.1 MGP_LPJ_G0018152.1 mouse_genomes_project 11 49725068 49738621 + MGP_LPJ_P0028758 Mgat4b protein_coding protein_coding MGP_LPJ_T0028759.1 MGP_LPJ_G0018152.1 mouse_genomes_project 11 49730471 49738621 + MGP_LPJ_P0028759 Mgat4b protein_coding nonsense_mediated_decay MGP_LPJ_T0028760.1 MGP_LPJ_G0018152.1 mouse_genomes_project 11 49730479 49735285 + Mgat4b protein_coding retained_intron MGP_LPJ_T0028761.1 MGP_LPJ_G0018152.1 mouse_genomes_project 11 49737540 49738435 + Mgat4b protein_coding retained_intron MGP_LPJ_T0031098.1 MGP_LPJ_G0018723.1 mouse_genomes_project 11 83796578 83806905 - MGP_LPJ_P0031098 Gm17268 protein_coding protein_coding MGP_LPJ_T0032191.1 MGP_LPJ_G0019025.1 mouse_genomes_project 11 103047276 103049421 - MGP_LPJ_P0032191 protein_coding protein_coding MGP_LPJ_T0030347.1 MGP_LPJ_G0018533.1 mouse_genomes_project 11 73163672 73164923 + MGP_LPJ_P0030347 Fam64a protein_coding protein_coding MGP_LPJ_T0030348.1 MGP_LPJ_G0018533.1 mouse_genomes_project 11 73164095 73169010 + MGP_LPJ_P0030348 Fam64a protein_coding protein_coding MGP_LPJ_T0030349.1 MGP_LPJ_G0018533.1 mouse_genomes_project 11 73164142 73165305 + Fam64a protein_coding processed_transcript MGP_LPJ_T0030350.1 MGP_LPJ_G0018533.1 mouse_genomes_project 11 73164164 73167733 + Fam64a protein_coding processed_transcript MGP_LPJ_T0030351.1 MGP_LPJ_G0018533.1 mouse_genomes_project 11 73164562 73166679 + MGP_LPJ_P0030351 Fam64a protein_coding protein_coding MGP_LPJ_T0012455.1 MGP_LPJ_G0010546.1 mouse_genomes_project 11 1270459 1270971 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100168.1 MGP_LPJ_G0038431.1 mouse_genomes_project 11 80100564 80100655 - Gm22947 snoRNA snoRNA MGP_LPJ_T0012495.1 MGP_LPJ_G0010586.1 mouse_genomes_project 11 16175781 16177027 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011315.1 MGP_LPJ_G0009433.1 mouse_genomes_project 11 50920804 50921059 + Gm25082 misc_RNA misc_RNA MGP_LPJ_T0027651.1 MGP_LPJ_G0017873.1 mouse_genomes_project 11 682463 851362 - MGP_LPJ_P0027651 Osbp2 protein_coding protein_coding MGP_LPJ_T0027652.1 MGP_LPJ_G0017873.1 mouse_genomes_project 11 682650 702304 - MGP_LPJ_P0027652 Osbp2 protein_coding protein_coding MGP_LPJ_T0027653.1 MGP_LPJ_G0017873.1 mouse_genomes_project 11 685149 851212 - MGP_LPJ_P0027653 Osbp2 protein_coding protein_coding MGP_LPJ_T0027654.1 MGP_LPJ_G0017873.1 mouse_genomes_project 11 697940 754542 - MGP_LPJ_P0027654 Osbp2 protein_coding protein_coding MGP_LPJ_T0027655.1 MGP_LPJ_G0017873.1 mouse_genomes_project 11 698000 755479 - MGP_LPJ_P0027655 Osbp2 protein_coding protein_coding MGP_LPJ_T0027656.1 MGP_LPJ_G0017873.1 mouse_genomes_project 11 704489 851362 - Osbp2 protein_coding processed_transcript MGP_LPJ_T0012685.1 MGP_LPJ_G0010776.1 mouse_genomes_project 11 82530522 82530936 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101783.1 MGP_LPJ_G0039821.1 mouse_genomes_project 11 97419983 97420774 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0030337.1 MGP_LPJ_G0018530.1 mouse_genomes_project 11 72310454 72346765 - MGP_LPJ_P0030337 Nlrp1b protein_coding protein_coding MGP_LPJ_T0030338.1 MGP_LPJ_G0018530.1 mouse_genomes_project 11 72313325 72346612 - MGP_LPJ_P0030338 Nlrp1b protein_coding protein_coding MGP_LPJ_T0000881.1 MGP_LPJ_G0000810.1 mouse_genomes_project 11 44297775 44298078 - TEC TEC MGP_LPJ_T0032938.1 MGP_LPJ_G0019197.1 mouse_genomes_project 11 109888036 109888345 + MGP_LPJ_P0032938 Gm10840 protein_coding protein_coding MGP_LPJ_T0006336.1 MGP_LPJ_G0005286.1 mouse_genomes_project 11 92454092 92462793 - Gm11494 lincRNA lincRNA MGP_LPJ_T0009721.1 MGP_LPJ_G0007839.1 mouse_genomes_project 11 73513802 73513911 + Mir6338 miRNA miRNA MGP_LPJ_T0032567.1 MGP_LPJ_G0019123.1 mouse_genomes_project 11 105615225 105620594 + Nags protein_coding processed_transcript MGP_LPJ_T0032568.1 MGP_LPJ_G0019123.1 mouse_genomes_project 11 105615261 105620594 + MGP_LPJ_P0032568 Nags protein_coding protein_coding MGP_LPJ_T0032569.1 MGP_LPJ_G0019123.1 mouse_genomes_project 11 105616066 105620594 + Nags protein_coding processed_transcript MGP_LPJ_T0028147.1 MGP_LPJ_G0017992.1 mouse_genomes_project 11 20801441 20804725 + MGP_LPJ_P0028147 Zrsr1 protein_coding protein_coding MGP_LPJ_T0033917.1 MGP_LPJ_G0019396.1 mouse_genomes_project 11 124850719 124899950 - MGP_LPJ_P0033917 Slc38a10 protein_coding protein_coding MGP_LPJ_T0033918.1 MGP_LPJ_G0019396.1 mouse_genomes_project 11 124851200 124899682 - MGP_LPJ_P0033918 Slc38a10 protein_coding protein_coding MGP_LPJ_T0033919.1 MGP_LPJ_G0019396.1 mouse_genomes_project 11 124852380 124853748 - Slc38a10 protein_coding processed_transcript MGP_LPJ_T0033920.1 MGP_LPJ_G0019396.1 mouse_genomes_project 11 124852437 124855348 - Slc38a10 protein_coding processed_transcript MGP_LPJ_T0033921.1 MGP_LPJ_G0019396.1 mouse_genomes_project 11 124852551 124857206 - Slc38a10 protein_coding processed_transcript MGP_LPJ_T0033922.1 MGP_LPJ_G0019396.1 mouse_genomes_project 11 124852564 124857218 - Slc38a10 protein_coding processed_transcript MGP_LPJ_T0033923.1 MGP_LPJ_G0019396.1 mouse_genomes_project 11 124852632 124857087 - Slc38a10 protein_coding processed_transcript MGP_LPJ_T0033924.1 MGP_LPJ_G0019396.1 mouse_genomes_project 11 124855296 124857098 - Slc38a10 protein_coding processed_transcript MGP_LPJ_T0033925.1 MGP_LPJ_G0019396.1 mouse_genomes_project 11 124857763 124899883 - Slc38a10 protein_coding processed_transcript MGP_LPJ_T0033926.1 MGP_LPJ_G0019396.1 mouse_genomes_project 11 124865631 124899950 - MGP_LPJ_P0033926 Slc38a10 protein_coding protein_coding MGP_LPJ_T0033927.1 MGP_LPJ_G0019396.1 mouse_genomes_project 11 124870612 124899950 - MGP_LPJ_P0033927 Slc38a10 protein_coding protein_coding MGP_LPJ_T0033928.1 MGP_LPJ_G0019396.1 mouse_genomes_project 11 124879589 124899924 - Slc38a10 protein_coding processed_transcript MGP_LPJ_T0033929.1 MGP_LPJ_G0019396.1 mouse_genomes_project 11 124883437 124899891 - Slc38a10 protein_coding processed_transcript MGP_LPJ_T0033930.1 MGP_LPJ_G0019396.1 mouse_genomes_project 11 124886607 124899926 - Slc38a10 protein_coding processed_transcript MGP_LPJ_T0033931.1 MGP_LPJ_G0019396.1 mouse_genomes_project 11 124887746 124891417 - Slc38a10 protein_coding processed_transcript MGP_LPJ_T0012697.1 MGP_LPJ_G0010788.1 mouse_genomes_project 11 87986950 87987429 + processed_pseudogene processed_pseudogene MGP_LPJ_T0030600.1 MGP_LPJ_G0018613.1 mouse_genomes_project 11 76740050 76752166 - MGP_LPJ_P0030600 Serpinf1 protein_coding protein_coding MGP_LPJ_T0030601.1 MGP_LPJ_G0018613.1 mouse_genomes_project 11 76740345 76748276 - MGP_LPJ_P0030601 Serpinf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0030602.1 MGP_LPJ_G0018613.1 mouse_genomes_project 11 76740502 76746010 - MGP_LPJ_P0030602 Serpinf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0030603.1 MGP_LPJ_G0018613.1 mouse_genomes_project 11 76744193 76752051 - MGP_LPJ_P0030603 Serpinf1 protein_coding protein_coding MGP_LPJ_T0030604.1 MGP_LPJ_G0018613.1 mouse_genomes_project 11 76744252 76745475 - Serpinf1 protein_coding retained_intron MGP_LPJ_T0030605.1 MGP_LPJ_G0018613.1 mouse_genomes_project 11 76745200 76752020 - MGP_LPJ_P0030605 Serpinf1 protein_coding protein_coding MGP_LPJ_T0030606.1 MGP_LPJ_G0018613.1 mouse_genomes_project 11 76745749 76752017 - MGP_LPJ_P0030606 Serpinf1 protein_coding protein_coding MGP_LPJ_T0030607.1 MGP_LPJ_G0018613.1 mouse_genomes_project 11 76746595 76748577 - MGP_LPJ_P0030607 Serpinf1 protein_coding protein_coding MGP_LPJ_T0030460.1 MGP_LPJ_G0018563.1 mouse_genomes_project 11 74431705 74459386 + MGP_LPJ_P0030460 Trpv1 protein_coding protein_coding MGP_LPJ_T0030461.1 MGP_LPJ_G0018563.1 mouse_genomes_project 11 74435656 74458654 + MGP_LPJ_P0030461 Trpv1 protein_coding protein_coding MGP_LPJ_T0030462.1 MGP_LPJ_G0018563.1 mouse_genomes_project 11 74435656 74458654 + MGP_LPJ_P0030462 Trpv1 protein_coding unknown_likely_coding MGP_LPJ_T0030463.1 MGP_LPJ_G0018563.1 mouse_genomes_project 11 74437435 74459389 + MGP_LPJ_P0030463 Trpv1 protein_coding protein_coding MGP_LPJ_T0030464.1 MGP_LPJ_G0018563.1 mouse_genomes_project 11 74437699 74452252 + MGP_LPJ_P0030464 Trpv1 protein_coding protein_coding MGP_LPJ_T0030465.1 MGP_LPJ_G0018563.1 mouse_genomes_project 11 74449738 74451652 + Trpv1 protein_coding processed_transcript MGP_LPJ_T0009687.1 MGP_LPJ_G0007805.1 mouse_genomes_project 11 49383338 49383453 + Gm23492 miRNA miRNA MGP_LPJ_T0031674.1 MGP_LPJ_G0018870.1 mouse_genomes_project 11 97315338 97330135 - MGP_LPJ_P0031674 Xylt2 protein_coding protein_coding MGP_LPJ_T0031675.1 MGP_LPJ_G0018870.1 mouse_genomes_project 11 97316074 97330135 - MGP_LPJ_P0031675 Xylt2 protein_coding nonsense_mediated_decay MGP_LPJ_T0031676.1 MGP_LPJ_G0018870.1 mouse_genomes_project 11 97317720 97319686 - MGP_LPJ_P0031676 Xylt2 protein_coding protein_coding MGP_LPJ_T0031677.1 MGP_LPJ_G0018870.1 mouse_genomes_project 11 97318364 97319296 - Xylt2 protein_coding retained_intron MGP_LPJ_T0031678.1 MGP_LPJ_G0018870.1 mouse_genomes_project 11 97320020 97330027 - MGP_LPJ_P0031678 Xylt2 protein_coding nonsense_mediated_decay MGP_LPJ_T0031679.1 MGP_LPJ_G0018870.1 mouse_genomes_project 11 97328582 97330033 - Xylt2 protein_coding processed_transcript MGP_LPJ_T0033903.1 MGP_LPJ_G0019393.1 mouse_genomes_project 11 124807537 124831224 - MGP_LPJ_P0033903 Cep131 protein_coding protein_coding MGP_LPJ_T0033904.1 MGP_LPJ_G0019393.1 mouse_genomes_project 11 124807541 124808076 - Cep131 protein_coding processed_transcript MGP_LPJ_T0033905.1 MGP_LPJ_G0019393.1 mouse_genomes_project 11 124807746 124811177 - Cep131 protein_coding processed_transcript MGP_LPJ_T0033906.1 MGP_LPJ_G0019393.1 mouse_genomes_project 11 124810252 124814045 - Cep131 protein_coding processed_transcript MGP_LPJ_T0033907.1 MGP_LPJ_G0019393.1 mouse_genomes_project 11 124811208 124815160 - Cep131 protein_coding processed_transcript MGP_LPJ_T0028063.1 MGP_LPJ_G0017971.1 mouse_genomes_project 11 16462981 16609653 - MGP_LPJ_P0028063 Meis1 protein_coding protein_coding MGP_LPJ_T0028064.1 MGP_LPJ_G0017971.1 mouse_genomes_project 11 16463592 16609637 - MGP_LPJ_P0028064 Meis1 protein_coding protein_coding MGP_LPJ_T0028065.1 MGP_LPJ_G0017971.1 mouse_genomes_project 11 16463592 16609382 - MGP_LPJ_P0028065 Meis1 protein_coding nonsense_mediated_decay MGP_LPJ_T0028066.1 MGP_LPJ_G0017971.1 mouse_genomes_project 11 16463831 16601656 - Meis1 protein_coding processed_transcript MGP_LPJ_T0028067.1 MGP_LPJ_G0017971.1 mouse_genomes_project 11 16463832 16608901 - MGP_LPJ_P0028067 Meis1 protein_coding protein_coding MGP_LPJ_T0028068.1 MGP_LPJ_G0017971.1 mouse_genomes_project 11 16464513 16606959 - MGP_LPJ_P0028068 Meis1 protein_coding nonsense_mediated_decay MGP_LPJ_T0028069.1 MGP_LPJ_G0017971.1 mouse_genomes_project 11 16576449 16609590 - Meis1 protein_coding retained_intron MGP_LPJ_T0028070.1 MGP_LPJ_G0017971.1 mouse_genomes_project 11 16599438 16609590 - Meis1 protein_coding retained_intron MGP_LPJ_T0012514.1 MGP_LPJ_G0010605.1 mouse_genomes_project 11 19486650 19487301 - processed_pseudogene processed_pseudogene MGP_LPJ_T0033306.1 MGP_LPJ_G0019281.1 mouse_genomes_project 11 119704636 119731048 + MGP_LPJ_P0033306 Otop2 protein_coding protein_coding MGP_LPJ_T0033308.1 MGP_LPJ_G0019281.1 mouse_genomes_project 11 119721293 119722275 + Otop2 protein_coding processed_transcript MGP_LPJ_T0033309.1 MGP_LPJ_G0019281.1 mouse_genomes_project 11 119721524 119722268 + Otop2 protein_coding processed_transcript MGP_LPJ_T0033310.1 MGP_LPJ_G0019281.1 mouse_genomes_project 11 119721688 119731048 + MGP_LPJ_P0033310 Otop2 protein_coding protein_coding MGP_LPJ_T0027632.1 MGP_LPJ_G0017870.1 mouse_genomes_project 11 486683 489348 + Selm protein_coding processed_transcript MGP_LPJ_T0027633.1 MGP_LPJ_G0017870.1 mouse_genomes_project 11 486701 489130 + Selm protein_coding processed_transcript MGP_LPJ_T0027634.1 MGP_LPJ_G0017870.1 mouse_genomes_project 11 486866 489351 + MGP_LPJ_P0027634 Selm protein_coding protein_coding MGP_LPJ_T0031195.1 MGP_LPJ_G0018754.1 mouse_genomes_project 11 85402082 85412518 - MGP_LPJ_P0031195 Heatr9 protein_coding protein_coding MGP_LPJ_T0032195.1 MGP_LPJ_G0019029.1 mouse_genomes_project 11 103128639 103129612 + MGP_LPJ_P0032195 Krtap31-1 protein_coding protein_coding MGP_LPJ_T0011307.1 MGP_LPJ_G0009425.1 mouse_genomes_project 11 621294 621471 - Gm27624 misc_RNA misc_RNA MGP_LPJ_T0028395.1 MGP_LPJ_G0018042.1 mouse_genomes_project 11 30738751 30747055 + MGP_LPJ_P0028395 protein_coding protein_coding MGP_LPJ_T0009767.1 MGP_LPJ_G0007885.1 mouse_genomes_project 11 106558580 106558654 - Mir6931 miRNA miRNA MGP_LPJ_T0100183.1 MGP_LPJ_G0038446.1 mouse_genomes_project 11 110240136 110240271 + Gm22711 snoRNA snoRNA MGP_LPJ_T0017178.1 MGP_LPJ_G0015110.1 mouse_genomes_project 11 99302004 99318799 - Gm11529 processed_transcript processed_transcript MGP_LPJ_T0012644.1 MGP_LPJ_G0010735.1 mouse_genomes_project 11 70067023 70067194 + processed_pseudogene processed_pseudogene MGP_LPJ_T0032201.1 MGP_LPJ_G0019035.1 mouse_genomes_project 11 103255816 103256577 - MGP_LPJ_P0032201 Krtap17-1 protein_coding protein_coding MGP_LPJ_T0029957.1 MGP_LPJ_G0018457.1 mouse_genomes_project 11 70800891 70802970 - MGP_LPJ_P0029957 Slc35g3 protein_coding protein_coding MGP_LPJ_T0031660.1 MGP_LPJ_G0018866.1 mouse_genomes_project 11 97213026 97217106 + MGP_LPJ_P0031660 Chad protein_coding protein_coding MGP_LPJ_T0030719.1 MGP_LPJ_G0018638.1 mouse_genomes_project 11 77823810 77919345 - MGP_LPJ_P0030719 Abr protein_coding protein_coding MGP_LPJ_T0030720.1 MGP_LPJ_G0018638.1 mouse_genomes_project 11 77823810 77975361 - MGP_LPJ_P0030720 Abr protein_coding protein_coding MGP_LPJ_T0030721.1 MGP_LPJ_G0018638.1 mouse_genomes_project 11 77823811 77918922 - MGP_LPJ_P0030721 Abr protein_coding protein_coding MGP_LPJ_T0030722.1 MGP_LPJ_G0018638.1 mouse_genomes_project 11 77823827 77877063 - MGP_LPJ_P0030722 Abr protein_coding protein_coding MGP_LPJ_T0030723.1 MGP_LPJ_G0018638.1 mouse_genomes_project 11 77826184 77905028 - MGP_LPJ_P0030723 Abr protein_coding protein_coding MGP_LPJ_T0030724.1 MGP_LPJ_G0018638.1 mouse_genomes_project 11 77830125 77844298 - Abr protein_coding processed_transcript MGP_LPJ_T0030725.1 MGP_LPJ_G0018638.1 mouse_genomes_project 11 77861745 77876903 - MGP_LPJ_P0030725 Abr protein_coding nonsense_mediated_decay MGP_LPJ_T0030726.1 MGP_LPJ_G0018638.1 mouse_genomes_project 11 77865682 77904531 - Abr protein_coding retained_intron MGP_LPJ_T0030727.1 MGP_LPJ_G0018638.1 mouse_genomes_project 11 77872893 77903467 - MGP_LPJ_P0030727 Abr protein_coding protein_coding MGP_LPJ_T0030728.1 MGP_LPJ_G0018638.1 mouse_genomes_project 11 77888922 77981577 - MGP_LPJ_P0030728 Abr protein_coding protein_coding MGP_LPJ_T0030729.1 MGP_LPJ_G0018638.1 mouse_genomes_project 11 77888976 78027307 - MGP_LPJ_P0030729 Abr protein_coding protein_coding MGP_LPJ_T0030730.1 MGP_LPJ_G0018638.1 mouse_genomes_project 11 77889032 78018390 - MGP_LPJ_P0030730 Abr protein_coding protein_coding MGP_LPJ_T0030731.1 MGP_LPJ_G0018638.1 mouse_genomes_project 11 77895665 77904510 - Abr protein_coding processed_transcript MGP_LPJ_T0006390.1 MGP_LPJ_G0005325.1 mouse_genomes_project 11 121613434 121615600 + Snhg20 lincRNA lincRNA MGP_LPJ_T0006391.1 MGP_LPJ_G0005325.1 mouse_genomes_project 11 121613434 121614102 + Snhg20 lincRNA lincRNA MGP_LPJ_T0006392.1 MGP_LPJ_G0005325.1 mouse_genomes_project 11 121613446 121615599 + Snhg20 lincRNA lincRNA MGP_LPJ_T0003227.1 MGP_LPJ_G0002992.1 mouse_genomes_project 11 64758688 64762464 + 2810001G20Rik antisense antisense MGP_LPJ_T0003228.1 MGP_LPJ_G0002992.1 mouse_genomes_project 11 64758786 64762464 + 2810001G20Rik antisense antisense MGP_LPJ_T0031582.1 MGP_LPJ_G0018851.1 mouse_genomes_project 11 96536803 96563514 - MGP_LPJ_P0031582 Gm20390 protein_coding protein_coding MGP_LPJ_T0029877.1 MGP_LPJ_G0018438.1 mouse_genomes_project 11 70395209 70396924 - MGP_LPJ_P0029877 Tmem88 protein_coding protein_coding MGP_LPJ_T0017112.1 MGP_LPJ_G0015074.1 mouse_genomes_project 11 21354533 21355454 + 1700030C12Rik processed_transcript processed_transcript MGP_LPJ_T0017113.1 MGP_LPJ_G0015074.1 mouse_genomes_project 11 21354537 21356469 + 1700030C12Rik processed_transcript processed_transcript MGP_LPJ_T0017114.1 MGP_LPJ_G0015074.1 mouse_genomes_project 11 21354563 21356000 + 1700030C12Rik processed_transcript processed_transcript MGP_LPJ_T0017115.1 MGP_LPJ_G0015074.1 mouse_genomes_project 11 21355658 21356452 + 1700030C12Rik processed_transcript processed_transcript MGP_LPJ_T0029288.1 MGP_LPJ_G0018314.1 mouse_genomes_project 11 60232755 60236505 - Pld6 protein_coding processed_transcript MGP_LPJ_T0029289.1 MGP_LPJ_G0018314.1 mouse_genomes_project 11 60233562 60236502 - MGP_LPJ_P0029289 Pld6 protein_coding protein_coding MGP_LPJ_T0033264.1 MGP_LPJ_G0019268.1 mouse_genomes_project 11 119327292 119341059 - Cd300c protein_coding processed_transcript MGP_LPJ_T0033265.1 MGP_LPJ_G0019268.1 mouse_genomes_project 11 119327444 119331707 - MGP_LPJ_P0033265 Cd300c protein_coding protein_coding MGP_LPJ_T0033266.1 MGP_LPJ_G0019268.1 mouse_genomes_project 11 119327457 119331707 - MGP_LPJ_P0033266 Cd300c protein_coding protein_coding MGP_LPJ_T0032178.1 MGP_LPJ_G0019012.1 mouse_genomes_project 11 102805693 102806708 - MGP_LPJ_P0032178 Krtap4-1 protein_coding protein_coding MGP_LPJ_T0031528.1 MGP_LPJ_G0018839.1 mouse_genomes_project 11 92286637 92309963 - MGP_LPJ_P0031528 Pctp protein_coding protein_coding MGP_LPJ_T0012627.1 MGP_LPJ_G0010718.1 mouse_genomes_project 11 61313264 61314607 + processed_pseudogene processed_pseudogene MGP_LPJ_T0029714.1 MGP_LPJ_G0018403.1 mouse_genomes_project 11 68751725 68815203 - MGP_LPJ_P0029714 Usp43 protein_coding protein_coding MGP_LPJ_T0029715.1 MGP_LPJ_G0018403.1 mouse_genomes_project 11 68751725 68815203 - MGP_LPJ_P0029715 Usp43 protein_coding protein_coding MGP_LPJ_T0029716.1 MGP_LPJ_G0018403.1 mouse_genomes_project 11 68752559 68767433 - Usp43 protein_coding retained_intron MGP_LPJ_T0029717.1 MGP_LPJ_G0018403.1 mouse_genomes_project 11 68787945 68814259 - Usp43 protein_coding processed_transcript MGP_LPJ_T0032321.1 MGP_LPJ_G0019072.1 mouse_genomes_project 11 104113338 104154177 - MGP_LPJ_P0032321 Stat5b protein_coding protein_coding MGP_LPJ_T0032322.1 MGP_LPJ_G0019072.1 mouse_genomes_project 11 104113338 104182940 - MGP_LPJ_P0032322 Stat5b protein_coding protein_coding MGP_LPJ_T0032323.1 MGP_LPJ_G0019072.1 mouse_genomes_project 11 104130499 104182754 - Stat5b protein_coding processed_transcript MGP_LPJ_T0003197.1 MGP_LPJ_G0002967.1 mouse_genomes_project 11 58335494 58337957 + Gm12246 antisense antisense MGP_LPJ_T0003365.1 MGP_LPJ_G0003102.1 mouse_genomes_project 11 121633152 121635272 - Gm11730 antisense antisense MGP_LPJ_T0003366.1 MGP_LPJ_G0003102.1 mouse_genomes_project 11 121633289 121635232 - Gm11730 antisense antisense MGP_LPJ_T0006386.1 MGP_LPJ_G0005322.1 mouse_genomes_project 11 120790701 120793348 + Gm26730 lincRNA lincRNA MGP_LPJ_T0012608.1 MGP_LPJ_G0010699.1 mouse_genomes_project 11 55557440 55557910 + processed_pseudogene processed_pseudogene MGP_LPJ_T0028600.1 MGP_LPJ_G0018102.1 mouse_genomes_project 11 45561240 45573519 + Fam71b protein_coding processed_transcript MGP_LPJ_T0028601.1 MGP_LPJ_G0018102.1 mouse_genomes_project 11 45571600 45574865 + MGP_LPJ_P0028601 Fam71b protein_coding protein_coding MGP_LPJ_T0097976.1 MGP_LPJ_G0036257.1 mouse_genomes_project 11 71653350 71653928 - pseudogene pseudogene MGP_LPJ_T0098882.1 MGP_LPJ_G0037145.1 mouse_genomes_project 11 633187 633316 - Gm26393 snRNA snRNA MGP_LPJ_T0032055.1 MGP_LPJ_G0018968.1 mouse_genomes_project 11 101617232 101623283 - MGP_LPJ_P0032055 Ormdl3 protein_coding protein_coding MGP_LPJ_T0017099.1 MGP_LPJ_G0015068.1 mouse_genomes_project 11 14487552 14506242 - Eldr processed_transcript processed_transcript MGP_LPJ_T0017100.1 MGP_LPJ_G0015068.1 mouse_genomes_project 11 14487557 14506261 - Eldr processed_transcript processed_transcript MGP_LPJ_T0017101.1 MGP_LPJ_G0015068.1 mouse_genomes_project 11 14487720 14506185 - Eldr processed_transcript processed_transcript MGP_LPJ_T0017102.1 MGP_LPJ_G0015068.1 mouse_genomes_project 11 14487984 14506243 - Eldr processed_transcript processed_transcript MGP_LPJ_T0017103.1 MGP_LPJ_G0015068.1 mouse_genomes_project 11 14488027 14506425 - Eldr processed_transcript processed_transcript MGP_LPJ_T0017104.1 MGP_LPJ_G0015068.1 mouse_genomes_project 11 14488100 14506225 - Eldr processed_transcript processed_transcript MGP_LPJ_T0017105.1 MGP_LPJ_G0015068.1 mouse_genomes_project 11 14491569 14506236 - Eldr processed_transcript processed_transcript MGP_LPJ_T0028722.1 MGP_LPJ_G0018145.1 mouse_genomes_project 11 49277014 49291248 + Gfpt2 protein_coding retained_intron MGP_LPJ_T0028723.1 MGP_LPJ_G0018145.1 mouse_genomes_project 11 49277023 49322073 + MGP_LPJ_P0028723 Gfpt2 protein_coding protein_coding MGP_LPJ_T0017193.1 MGP_LPJ_G0015119.1 mouse_genomes_project 11 101367672 101375248 - 1700003D09Rik processed_transcript processed_transcript MGP_LPJ_T0034161.1 MGP_LPJ_G0019445.1 mouse_genomes_project 11 126019257 126037871 + MGP_LPJ_P0034161 Hexdc protein_coding protein_coding MGP_LPJ_T0034162.1 MGP_LPJ_G0019445.1 mouse_genomes_project 11 126019259 126037863 + MGP_LPJ_P0034162 Hexdc protein_coding protein_coding MGP_LPJ_T0034163.1 MGP_LPJ_G0019445.1 mouse_genomes_project 11 126019599 126035104 + Hexdc protein_coding processed_transcript MGP_LPJ_T0034164.1 MGP_LPJ_G0019445.1 mouse_genomes_project 11 126019625 126029522 + Hexdc protein_coding processed_transcript MGP_LPJ_T0034165.1 MGP_LPJ_G0019445.1 mouse_genomes_project 11 126022155 126037863 + MGP_LPJ_P0034165 Hexdc protein_coding protein_coding MGP_LPJ_T0034166.1 MGP_LPJ_G0019445.1 mouse_genomes_project 11 126026502 126036240 + MGP_LPJ_P0034166 Hexdc protein_coding protein_coding MGP_LPJ_T0033629.1 MGP_LPJ_G0019338.1 mouse_genomes_project 11 121201844 121207464 + MGP_LPJ_P0033629 1810032O08Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0033630.1 MGP_LPJ_G0019338.1 mouse_genomes_project 11 121201863 121207474 + MGP_LPJ_P0033630 1810032O08Rik protein_coding unknown_likely_coding MGP_LPJ_T0033631.1 MGP_LPJ_G0019338.1 mouse_genomes_project 11 121201871 121202798 + 1810032O08Rik protein_coding retained_intron MGP_LPJ_T0033632.1 MGP_LPJ_G0019338.1 mouse_genomes_project 11 121201883 121204764 + MGP_LPJ_P0033632 1810032O08Rik protein_coding protein_coding MGP_LPJ_T0033633.1 MGP_LPJ_G0019338.1 mouse_genomes_project 11 121202056 121204150 + MGP_LPJ_P0033633 1810032O08Rik protein_coding protein_coding MGP_LPJ_T0033634.1 MGP_LPJ_G0019338.1 mouse_genomes_project 11 121202867 121207468 + MGP_LPJ_P0033634 1810032O08Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0101478.1 MGP_LPJ_G0039626.1 mouse_genomes_project 11 2923011 2944050 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101479.1 MGP_LPJ_G0039626.1 mouse_genomes_project 11 2923032 2944414 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101480.1 MGP_LPJ_G0039626.1 mouse_genomes_project 11 2923032 2946889 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101481.1 MGP_LPJ_G0039626.1 mouse_genomes_project 11 2923099 2946116 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0101482.1 MGP_LPJ_G0039626.1 mouse_genomes_project 11 2926973 2946607 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0012709.1 MGP_LPJ_G0010800.1 mouse_genomes_project 11 94286628 94287577 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012541.1 MGP_LPJ_G0010632.1 mouse_genomes_project 11 28856678 28857631 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017093.1 MGP_LPJ_G0015065.1 mouse_genomes_project 11 3735465 3739868 - Snhg15 processed_transcript processed_transcript MGP_LPJ_T0017094.1 MGP_LPJ_G0015065.1 mouse_genomes_project 11 3735466 3736605 - Snhg15 processed_transcript processed_transcript MGP_LPJ_T0017095.1 MGP_LPJ_G0015065.1 mouse_genomes_project 11 3735499 3739549 - Snhg15 processed_transcript processed_transcript MGP_LPJ_T0017096.1 MGP_LPJ_G0015065.1 mouse_genomes_project 11 3739006 3739854 - Snhg15 processed_transcript processed_transcript MGP_LPJ_T0012628.1 MGP_LPJ_G0010719.1 mouse_genomes_project 11 61315648 61316432 - processed_pseudogene processed_pseudogene MGP_LPJ_T0031190.1 MGP_LPJ_G0018753.1 mouse_genomes_project 11 85360421 85379616 + Taf15 protein_coding processed_transcript MGP_LPJ_T0031191.1 MGP_LPJ_G0018753.1 mouse_genomes_project 11 85360427 85397047 + MGP_LPJ_P0031191 Taf15 protein_coding protein_coding MGP_LPJ_T0031192.1 MGP_LPJ_G0018753.1 mouse_genomes_project 11 85360446 85369709 + Taf15 protein_coding retained_intron MGP_LPJ_T0031193.1 MGP_LPJ_G0018753.1 mouse_genomes_project 11 85360450 85379448 + Taf15 protein_coding processed_transcript MGP_LPJ_T0031194.1 MGP_LPJ_G0018753.1 mouse_genomes_project 11 85379429 85397045 + MGP_LPJ_P0031194 Taf15 protein_coding protein_coding MGP_LPJ_T0006365.1 MGP_LPJ_G0005306.1 mouse_genomes_project 11 113310558 113317220 + 1700096J18Rik lincRNA lincRNA MGP_LPJ_T0033058.1 MGP_LPJ_G0019222.1 mouse_genomes_project 11 111329287 111347691 + MGP_LPJ_P0033058 Psmd12 protein_coding protein_coding MGP_LPJ_T0033059.1 MGP_LPJ_G0019222.1 mouse_genomes_project 11 111329331 111355069 + MGP_LPJ_P0033059 Psmd12 protein_coding protein_coding MGP_LPJ_T0033060.1 MGP_LPJ_G0019222.1 mouse_genomes_project 11 111329380 111347258 + MGP_LPJ_P0033060 Psmd12 protein_coding protein_coding MGP_LPJ_T0003153.1 MGP_LPJ_G0002927.1 mouse_genomes_project 11 21991191 22008495 - Gm12064 antisense antisense MGP_LPJ_T0029707.1 MGP_LPJ_G0018401.1 mouse_genomes_project 11 68664789 68682579 + MGP_LPJ_P0029707 Gsg1l2 protein_coding protein_coding MGP_LPJ_T0029708.1 MGP_LPJ_G0018401.1 mouse_genomes_project 11 68671118 68678015 + MGP_LPJ_P0029708 Gsg1l2 protein_coding protein_coding MGP_LPJ_T0032204.1 MGP_LPJ_G0019038.1 mouse_genomes_project 11 103328565 103332471 - MGP_LPJ_P0032204 Krt31 protein_coding protein_coding MGP_LPJ_T0003367.1 MGP_LPJ_G0003103.1 mouse_genomes_project 11 121818167 121823958 - Gm16045 antisense antisense MGP_LPJ_T0012739.1 MGP_LPJ_G0010830.1 mouse_genomes_project 11 106188447 106189245 - processed_pseudogene processed_pseudogene MGP_LPJ_T0032169.1 MGP_LPJ_G0019003.1 mouse_genomes_project 11 102700183 102700483 - MGP_LPJ_P0032169 Gm11939 protein_coding protein_coding MGP_LPJ_T0029994.1 MGP_LPJ_G0018470.1 mouse_genomes_project 11 70940654 70955175 - MGP_LPJ_P0029994 Acap1 protein_coding protein_coding MGP_LPJ_T0029995.1 MGP_LPJ_G0018470.1 mouse_genomes_project 11 70940654 70960403 - MGP_LPJ_P0029995 Acap1 protein_coding protein_coding MGP_LPJ_T0029996.1 MGP_LPJ_G0018470.1 mouse_genomes_project 11 70940712 70964340 - MGP_LPJ_P0029996 Acap1 protein_coding unknown_likely_coding MGP_LPJ_T0029997.1 MGP_LPJ_G0018470.1 mouse_genomes_project 11 70942586 70947529 - Acap1 protein_coding processed_transcript MGP_LPJ_T0029998.1 MGP_LPJ_G0018470.1 mouse_genomes_project 11 70954217 70955335 - Acap1 protein_coding processed_transcript MGP_LPJ_T0098118.1 MGP_LPJ_G0036399.1 mouse_genomes_project 11 60262671 60262808 + Gm24939 rRNA rRNA MGP_LPJ_T0012753.1 MGP_LPJ_G0010844.1 mouse_genomes_project 11 110993314 110993647 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006295.1 MGP_LPJ_G0005258.1 mouse_genomes_project 11 73037125 73049789 - 4930401O10Rik lincRNA lincRNA MGP_LPJ_T0031990.1 MGP_LPJ_G0018952.1 mouse_genomes_project 11 101009582 101015176 + MGP_LPJ_P0031990 Rpl19 protein_coding protein_coding MGP_LPJ_T0031991.1 MGP_LPJ_G0018952.1 mouse_genomes_project 11 101009796 101015176 + MGP_LPJ_P0031991 Rpl19 protein_coding protein_coding MGP_LPJ_T0031992.1 MGP_LPJ_G0018952.1 mouse_genomes_project 11 101009829 101011023 + Rpl19 protein_coding retained_intron MGP_LPJ_T0098910.1 MGP_LPJ_G0037173.1 mouse_genomes_project 11 66359352 66359462 + Gm26128 snRNA snRNA MGP_LPJ_T0012527.1 MGP_LPJ_G0010618.1 mouse_genomes_project 11 25051915 25052134 + processed_pseudogene processed_pseudogene MGP_LPJ_T0030965.1 MGP_LPJ_G0018689.1 mouse_genomes_project 11 80056802 80069920 - MGP_LPJ_P0030965 Tnfaip1 protein_coding protein_coding MGP_LPJ_T0030966.1 MGP_LPJ_G0018689.1 mouse_genomes_project 11 80056802 80069981 - MGP_LPJ_P0030966 Tnfaip1 protein_coding protein_coding MGP_LPJ_T0012490.1 MGP_LPJ_G0010581.1 mouse_genomes_project 11 14865054 14865897 - processed_pseudogene processed_pseudogene MGP_LPJ_T0030982.1 MGP_LPJ_G0018695.1 mouse_genomes_project 11 80540254 80562309 - MGP_LPJ_P0030982 Lgals9 protein_coding protein_coding MGP_LPJ_T0030983.1 MGP_LPJ_G0018695.1 mouse_genomes_project 11 80540259 80562287 - MGP_LPJ_P0030983 Lgals9 protein_coding protein_coding MGP_LPJ_T0030984.1 MGP_LPJ_G0018695.1 mouse_genomes_project 11 80540675 80562194 - MGP_LPJ_P0030984 Lgals9 protein_coding protein_coding MGP_LPJ_T0030985.1 MGP_LPJ_G0018695.1 mouse_genomes_project 11 80544161 80547611 - Lgals9 protein_coding retained_intron MGP_LPJ_T0032744.1 MGP_LPJ_G0019152.1 mouse_genomes_project 11 106491567 106498991 - MGP_LPJ_P0032744 C1ql1 protein_coding protein_coding MGP_LPJ_T0017131.1 MGP_LPJ_G0015085.1 mouse_genomes_project 11 58559904 58561356 + 1700047K16Rik processed_transcript processed_transcript MGP_LPJ_T0030187.1 MGP_LPJ_G0018504.1 mouse_genomes_project 11 71624025 71625126 - MGP_LPJ_P0030187 Vmo1 protein_coding protein_coding MGP_LPJ_T0006259.1 MGP_LPJ_G0005228.1 mouse_genomes_project 11 51642122 51996393 - lincRNA lincRNA MGP_LPJ_T0006235.1 MGP_LPJ_G0005206.1 mouse_genomes_project 11 31614173 31617597 + lincRNA lincRNA MGP_LPJ_T0011327.1 MGP_LPJ_G0009445.1 mouse_genomes_project 11 99039084 99039164 - Gm27898 misc_RNA misc_RNA MGP_LPJ_T0032150.1 MGP_LPJ_G0018989.1 mouse_genomes_project 11 102353452 102364748 - MGP_LPJ_P0032150 Krt222 protein_coding protein_coding MGP_LPJ_T0032151.1 MGP_LPJ_G0018989.1 mouse_genomes_project 11 102354581 102364766 - MGP_LPJ_P0032151 Krt222 protein_coding protein_coding MGP_LPJ_T0032152.1 MGP_LPJ_G0018989.1 mouse_genomes_project 11 102355634 102359567 - Krt222 protein_coding processed_transcript MGP_LPJ_T0030941.1 MGP_LPJ_G0018683.1 mouse_genomes_project 11 79997350 80003598 + MGP_LPJ_P0030941 Slc46a1 protein_coding protein_coding MGP_LPJ_T0030942.1 MGP_LPJ_G0018683.1 mouse_genomes_project 11 79997403 80003276 + MGP_LPJ_P0030942 Slc46a1 protein_coding nonsense_mediated_decay MGP_LPJ_T0030943.1 MGP_LPJ_G0018683.1 mouse_genomes_project 11 80001879 80003712 + Slc46a1 protein_coding retained_intron MGP_LPJ_T0029728.1 MGP_LPJ_G0018406.1 mouse_genomes_project 11 69122320 69304534 - MGP_LPJ_P0029728 Ntn1 protein_coding protein_coding MGP_LPJ_T0029729.1 MGP_LPJ_G0018406.1 mouse_genomes_project 11 69122320 69319385 - MGP_LPJ_P0029729 Ntn1 protein_coding protein_coding MGP_LPJ_T0029730.1 MGP_LPJ_G0018406.1 mouse_genomes_project 11 69303351 69304720 - MGP_LPJ_P0029730 Ntn1 protein_coding protein_coding MGP_LPJ_T0012677.1 MGP_LPJ_G0010768.1 mouse_genomes_project 11 80100238 80100520 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012783.1 MGP_LPJ_G0010874.1 mouse_genomes_project 11 125979831 125980286 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098924.1 MGP_LPJ_G0037187.1 mouse_genomes_project 11 81267671 81267779 - Gm24887 snRNA snRNA MGP_LPJ_T0030039.1 MGP_LPJ_G0018475.1 mouse_genomes_project 11 71006650 71013155 + MGP_LPJ_P0030039 Ybx2 protein_coding protein_coding MGP_LPJ_T0030040.1 MGP_LPJ_G0018475.1 mouse_genomes_project 11 71007002 71013148 + MGP_LPJ_P0030040 Ybx2 protein_coding protein_coding MGP_LPJ_T0030041.1 MGP_LPJ_G0018475.1 mouse_genomes_project 11 71011397 71012213 + Ybx2 protein_coding retained_intron MGP_LPJ_T0030042.1 MGP_LPJ_G0018475.1 mouse_genomes_project 11 71012094 71013146 + Ybx2 protein_coding retained_intron MGP_LPJ_T0009732.1 MGP_LPJ_G0007850.1 mouse_genomes_project 11 79579491 79579563 + Mir451a miRNA miRNA MGP_LPJ_T0006328.1 MGP_LPJ_G0005280.1 mouse_genomes_project 11 90476401 90480049 + Gm44783 lincRNA lincRNA MGP_LPJ_T0006275.1 MGP_LPJ_G0005243.1 mouse_genomes_project 11 64062407 64068471 + B130011K05Rik lincRNA lincRNA MGP_LPJ_T0009789.1 MGP_LPJ_G0007907.1 mouse_genomes_project 11 125106178 125106232 - Mir6935 miRNA miRNA MGP_LPJ_T0027720.1 MGP_LPJ_G0017891.1 mouse_genomes_project 11 1298667 1313553 + MGP_LPJ_P0027720 Lif protein_coding protein_coding MGP_LPJ_T0027721.1 MGP_LPJ_G0017891.1 mouse_genomes_project 11 1307834 1309288 + Lif protein_coding processed_transcript MGP_LPJ_T0027722.1 MGP_LPJ_G0017891.1 mouse_genomes_project 11 1308133 1313553 + MGP_LPJ_P0027722 Lif protein_coding protein_coding MGP_LPJ_T0028798.1 MGP_LPJ_G0018161.1 mouse_genomes_project 11 50397030 50406041 - MGP_LPJ_P0028798 Zfp879 protein_coding protein_coding MGP_LPJ_T0032163.1 MGP_LPJ_G0018999.1 mouse_genomes_project 11 102649221 102656447 - MGP_LPJ_P0032163 Krt39 protein_coding protein_coding MGP_LPJ_T0032164.1 MGP_LPJ_G0018999.1 mouse_genomes_project 11 102649731 102656367 - MGP_LPJ_P0032164 Krt39 protein_coding protein_coding MGP_LPJ_T0006400.1 MGP_LPJ_G0005333.1 mouse_genomes_project 11 123898689 123902792 + lincRNA lincRNA MGP_LPJ_T0100131.1 MGP_LPJ_G0038394.1 mouse_genomes_project 11 20668533 20668635 + Gm23772 snoRNA snoRNA MGP_LPJ_T0028640.1 MGP_LPJ_G0018114.1 mouse_genomes_project 11 48116172 48129259 + MGP_LPJ_P0028640 protein_coding protein_coding MGP_LPJ_T0028641.1 MGP_LPJ_G0018114.1 mouse_genomes_project 11 48116178 48120137 + MGP_LPJ_P0028641 protein_coding nonsense_mediated_decay MGP_LPJ_T0028642.1 MGP_LPJ_G0018114.1 mouse_genomes_project 11 48117221 48124251 + MGP_LPJ_P0028642 protein_coding protein_coding MGP_LPJ_T0028643.1 MGP_LPJ_G0018114.1 mouse_genomes_project 11 48117511 48124308 + MGP_LPJ_P0028643 protein_coding protein_coding MGP_LPJ_T0028644.1 MGP_LPJ_G0018114.1 mouse_genomes_project 11 48117544 48129858 + MGP_LPJ_P0028644 protein_coding protein_coding MGP_LPJ_T0028645.1 MGP_LPJ_G0018114.1 mouse_genomes_project 11 48126605 48130880 + protein_coding retained_intron MGP_LPJ_T0029502.1 MGP_LPJ_G0018354.1 mouse_genomes_project 11 62229247 62232015 + Fam83g protein_coding processed_transcript MGP_LPJ_T0029503.1 MGP_LPJ_G0018354.1 mouse_genomes_project 11 62229575 62255078 + MGP_LPJ_P0029503 Fam83g protein_coding protein_coding MGP_LPJ_T0012529.1 MGP_LPJ_G0010620.1 mouse_genomes_project 11 25525132 25525853 + processed_pseudogene processed_pseudogene MGP_LPJ_T0033645.1 MGP_LPJ_G0019342.1 mouse_genomes_project 11 121346043 121352777 - Jmjd6 protein_coding retained_intron MGP_LPJ_T0033646.1 MGP_LPJ_G0019342.1 mouse_genomes_project 11 121346043 121352945 - MGP_LPJ_P0033646 Jmjd6 protein_coding protein_coding MGP_LPJ_T0033647.1 MGP_LPJ_G0019342.1 mouse_genomes_project 11 121346044 121352786 - Jmjd6 protein_coding retained_intron MGP_LPJ_T0033648.1 MGP_LPJ_G0019342.1 mouse_genomes_project 11 121346044 121352851 - MGP_LPJ_P0033648 Jmjd6 protein_coding nonsense_mediated_decay MGP_LPJ_T0033649.1 MGP_LPJ_G0019342.1 mouse_genomes_project 11 121346046 121349857 - MGP_LPJ_P0033649 Jmjd6 protein_coding protein_coding MGP_LPJ_T0033650.1 MGP_LPJ_G0019342.1 mouse_genomes_project 11 121346199 121352201 - MGP_LPJ_P0033650 Jmjd6 protein_coding nonsense_mediated_decay MGP_LPJ_T0033651.1 MGP_LPJ_G0019342.1 mouse_genomes_project 11 121346224 121352216 - MGP_LPJ_P0033651 Jmjd6 protein_coding nonsense_mediated_decay MGP_LPJ_T0028100.1 MGP_LPJ_G0017980.1 mouse_genomes_project 11 18823735 18879471 + Peli1 protein_coding retained_intron MGP_LPJ_T0028101.1 MGP_LPJ_G0017980.1 mouse_genomes_project 11 18823735 18887522 + MGP_LPJ_P0028101 Peli1 protein_coding protein_coding MGP_LPJ_T0028102.1 MGP_LPJ_G0017980.1 mouse_genomes_project 11 18824562 18886493 + Peli1 protein_coding retained_intron MGP_LPJ_T0028103.1 MGP_LPJ_G0017980.1 mouse_genomes_project 11 18870889 18887522 + MGP_LPJ_P0028103 Peli1 protein_coding protein_coding MGP_LPJ_T0012664.1 MGP_LPJ_G0010755.1 mouse_genomes_project 11 75286740 75287362 - processed_pseudogene processed_pseudogene MGP_LPJ_T0028288.1 MGP_LPJ_G0018020.1 mouse_genomes_project 11 27813968 27852205 + MGP_LPJ_P0028288 Clhc1 protein_coding protein_coding MGP_LPJ_T0028289.1 MGP_LPJ_G0018020.1 mouse_genomes_project 11 27830834 27852184 + Clhc1 protein_coding processed_transcript MGP_LPJ_T0028290.1 MGP_LPJ_G0018020.1 mouse_genomes_project 11 27830851 27852042 + Clhc1 protein_coding processed_transcript MGP_LPJ_T0012621.1 MGP_LPJ_G0010712.1 mouse_genomes_project 11 59920133 59920438 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003304.1 MGP_LPJ_G0003052.1 mouse_genomes_project 11 101460263 101461273 + Gm12352 antisense antisense MGP_LPJ_T0030138.1 MGP_LPJ_G0018493.1 mouse_genomes_project 11 71325443 71328088 - MGP_LPJ_P0030138 0610010K14Rik protein_coding protein_coding MGP_LPJ_T0030139.1 MGP_LPJ_G0018493.1 mouse_genomes_project 11 71325443 71328139 - MGP_LPJ_P0030139 0610010K14Rik protein_coding protein_coding MGP_LPJ_T0030140.1 MGP_LPJ_G0018493.1 mouse_genomes_project 11 71325443 71326434 - MGP_LPJ_P0030140 0610010K14Rik protein_coding protein_coding MGP_LPJ_T0030141.1 MGP_LPJ_G0018493.1 mouse_genomes_project 11 71325443 71328149 - MGP_LPJ_P0030141 0610010K14Rik protein_coding protein_coding MGP_LPJ_T0030143.1 MGP_LPJ_G0018493.1 mouse_genomes_project 11 71325599 71327913 - MGP_LPJ_P0030143 0610010K14Rik protein_coding protein_coding MGP_LPJ_T0030144.1 MGP_LPJ_G0018493.1 mouse_genomes_project 11 71325608 71327724 - 0610010K14Rik protein_coding processed_transcript MGP_LPJ_T0030145.1 MGP_LPJ_G0018493.1 mouse_genomes_project 11 71325616 71327998 - 0610010K14Rik protein_coding processed_transcript MGP_LPJ_T0030146.1 MGP_LPJ_G0018493.1 mouse_genomes_project 11 71325641 71328039 - MGP_LPJ_P0030146 0610010K14Rik protein_coding protein_coding MGP_LPJ_T0030147.1 MGP_LPJ_G0018493.1 mouse_genomes_project 11 71325973 71328096 - MGP_LPJ_P0030147 0610010K14Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0030148.1 MGP_LPJ_G0018493.1 mouse_genomes_project 11 71326688 71328147 - 0610010K14Rik protein_coding retained_intron MGP_LPJ_T0033805.1 MGP_LPJ_G0019373.1 mouse_genomes_project 11 123652448 123657094 + MGP_LPJ_P0033805 Enpp7 protein_coding protein_coding MGP_LPJ_T0033806.1 MGP_LPJ_G0019373.1 mouse_genomes_project 11 123652476 123656918 + MGP_LPJ_P0033806 Enpp7 protein_coding protein_coding MGP_LPJ_T0100163.1 MGP_LPJ_G0038426.1 mouse_genomes_project 11 78724121 78724209 - Gm24989 snoRNA snoRNA MGP_LPJ_T0003275.1 MGP_LPJ_G0003029.1 mouse_genomes_project 11 89920705 89927331 - Gm11505 antisense antisense MGP_LPJ_T0029125.1 MGP_LPJ_G0018248.1 mouse_genomes_project 11 57768065 57925517 + MGP_LPJ_P0029125 Galnt10 protein_coding protein_coding MGP_LPJ_T0029126.1 MGP_LPJ_G0018248.1 mouse_genomes_project 11 57768088 57864478 + MGP_LPJ_P0029126 Galnt10 protein_coding protein_coding MGP_LPJ_T0000879.1 MGP_LPJ_G0000808.1 mouse_genomes_project 11 30095994 30096368 + TEC TEC MGP_LPJ_T0033415.1 MGP_LPJ_G0019300.1 mouse_genomes_project 11 120075341 120140319 - MGP_LPJ_P0033415 Grb2 protein_coding protein_coding MGP_LPJ_T0033416.1 MGP_LPJ_G0019300.1 mouse_genomes_project 11 120075341 120140546 - MGP_LPJ_P0033416 Grb2 protein_coding protein_coding MGP_LPJ_T0033417.1 MGP_LPJ_G0019300.1 mouse_genomes_project 11 120075341 120150503 - MGP_LPJ_P0033417 Grb2 protein_coding protein_coding MGP_LPJ_T0033418.1 MGP_LPJ_G0019300.1 mouse_genomes_project 11 120075946 120150482 - MGP_LPJ_P0033418 Grb2 protein_coding protein_coding MGP_LPJ_T0033419.1 MGP_LPJ_G0019300.1 mouse_genomes_project 11 120083311 120140940 - MGP_LPJ_P0033419 Grb2 protein_coding protein_coding MGP_LPJ_T0028393.1 MGP_LPJ_G0018041.1 mouse_genomes_project 11 30728029 30729771 + MGP_LPJ_P0028393 Hba-x protein_coding protein_coding MGP_LPJ_T0028394.1 MGP_LPJ_G0018041.1 mouse_genomes_project 11 30728522 30729771 + MGP_LPJ_P0028394 Hba-x protein_coding protein_coding MGP_LPJ_T0003214.1 MGP_LPJ_G0002981.1 mouse_genomes_project 11 63145633 63146628 - Gm12279 antisense antisense MGP_LPJ_T0029873.1 MGP_LPJ_G0018437.1 mouse_genomes_project 11 70394178 70395016 + Naa38 protein_coding processed_transcript MGP_LPJ_T0029874.1 MGP_LPJ_G0018437.1 mouse_genomes_project 11 70394338 70395371 + MGP_LPJ_P0029874 Naa38 protein_coding protein_coding MGP_LPJ_T0029875.1 MGP_LPJ_G0018437.1 mouse_genomes_project 11 70394505 70395371 + Naa38 protein_coding processed_transcript MGP_LPJ_T0029876.1 MGP_LPJ_G0018437.1 mouse_genomes_project 11 70394809 70395371 + Naa38 protein_coding processed_transcript MGP_LPJ_T0012772.1 MGP_LPJ_G0010863.1 mouse_genomes_project 11 120168397 120168611 + processed_pseudogene processed_pseudogene MGP_LPJ_T0032810.1 MGP_LPJ_G0019165.1 mouse_genomes_project 11 107117400 107201091 - MGP_LPJ_P0032810 protein_coding protein_coding MGP_LPJ_T0027863.1 MGP_LPJ_G0017923.1 mouse_genomes_project 11 3128094 3140128 + MGP_LPJ_P0027863 Ykt6 protein_coding protein_coding MGP_LPJ_T0027864.1 MGP_LPJ_G0017923.1 mouse_genomes_project 11 3131641 3135549 + Ykt6 protein_coding processed_transcript MGP_LPJ_T0029887.1 MGP_LPJ_G0018442.1 mouse_genomes_project 11 70578986 70581151 - Wrap53 protein_coding processed_transcript MGP_LPJ_T0029888.1 MGP_LPJ_G0018442.1 mouse_genomes_project 11 70578987 70598288 - MGP_LPJ_P0029888 Wrap53 protein_coding protein_coding MGP_LPJ_T0029889.1 MGP_LPJ_G0018442.1 mouse_genomes_project 11 70596671 70599219 - MGP_LPJ_P0029889 Wrap53 protein_coding protein_coding MGP_LPJ_T0031156.1 MGP_LPJ_G0018741.1 mouse_genomes_project 11 84809880 84841558 - MGP_LPJ_P0031156 protein_coding protein_coding MGP_LPJ_T0032470.1 MGP_LPJ_G0019104.1 mouse_genomes_project 11 104856001 104866304 + MGP_LPJ_P0032470 Ifi35 protein_coding protein_coding MGP_LPJ_T0032471.1 MGP_LPJ_G0019104.1 mouse_genomes_project 11 104856038 104865731 + Ifi35 protein_coding retained_intron MGP_LPJ_T0032472.1 MGP_LPJ_G0019104.1 mouse_genomes_project 11 104856164 104866070 + MGP_LPJ_P0032472 Ifi35 protein_coding nonsense_mediated_decay MGP_LPJ_T0029194.1 MGP_LPJ_G0018277.1 mouse_genomes_project 11 58969906 58970872 + MGP_LPJ_P0029194 protein_coding protein_coding MGP_LPJ_T0028880.1 MGP_LPJ_G0018186.1 mouse_genomes_project 11 51495899 51533026 - MGP_LPJ_P0028880 Jade2 protein_coding protein_coding MGP_LPJ_T0028881.1 MGP_LPJ_G0018186.1 mouse_genomes_project 11 51526275 51540894 - Jade2 protein_coding processed_transcript MGP_LPJ_T0017144.1 MGP_LPJ_G0015092.1 mouse_genomes_project 11 67825393 67838619 + Gm12299 processed_transcript processed_transcript MGP_LPJ_T0032610.1 MGP_LPJ_G0019129.1 mouse_genomes_project 11 105745185 105758162 + MGP_LPJ_P0032610 Asb16 protein_coding protein_coding MGP_LPJ_T0027989.1 MGP_LPJ_G0017955.1 mouse_genomes_project 11 9081676 9152354 + MGP_LPJ_P0027989 Ikzf1 protein_coding protein_coding MGP_LPJ_T0027990.1 MGP_LPJ_G0017955.1 mouse_genomes_project 11 9081676 9105270 + MGP_LPJ_P0027990 Ikzf1 protein_coding protein_coding MGP_LPJ_T0027991.1 MGP_LPJ_G0017955.1 mouse_genomes_project 11 9082598 9170064 + MGP_LPJ_P0027991 Ikzf1 protein_coding protein_coding MGP_LPJ_T0027992.1 MGP_LPJ_G0017955.1 mouse_genomes_project 11 9082886 9170878 + MGP_LPJ_P0027992 Ikzf1 protein_coding protein_coding MGP_LPJ_T0027993.1 MGP_LPJ_G0017955.1 mouse_genomes_project 11 9082902 9159699 + MGP_LPJ_P0027993 Ikzf1 protein_coding protein_coding MGP_LPJ_T0027994.1 MGP_LPJ_G0017955.1 mouse_genomes_project 11 9083118 9167750 + MGP_LPJ_P0027994 Ikzf1 protein_coding protein_coding MGP_LPJ_T0031372.1 MGP_LPJ_G0018796.1 mouse_genomes_project 11 88745911 88754948 + MGP_LPJ_P0031372 Ptrh2 protein_coding protein_coding MGP_LPJ_T0031373.1 MGP_LPJ_G0018796.1 mouse_genomes_project 11 88745911 88754948 + MGP_LPJ_P0031373 Ptrh2 protein_coding protein_coding MGP_LPJ_T0031155.1 MGP_LPJ_G0018740.1 mouse_genomes_project 11 84781465 84795337 - MGP_LPJ_P0031155 protein_coding protein_coding MGP_LPJ_T0012762.1 MGP_LPJ_G0010853.1 mouse_genomes_project 11 116177483 116178262 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012721.1 MGP_LPJ_G0010812.1 mouse_genomes_project 11 99750883 99751690 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098920.1 MGP_LPJ_G0037183.1 mouse_genomes_project 11 78440578 78440728 + Gm22611 snRNA snRNA MGP_LPJ_T0012686.1 MGP_LPJ_G0010777.1 mouse_genomes_project 11 82772898 82774876 + processed_pseudogene processed_pseudogene MGP_LPJ_T0032561.1 MGP_LPJ_G0019121.1 mouse_genomes_project 11 105565331 105566735 - MGP_LPJ_P0032561 Ppy protein_coding protein_coding MGP_LPJ_T0032562.1 MGP_LPJ_G0019121.1 mouse_genomes_project 11 105565331 105566726 - MGP_LPJ_P0032562 Ppy protein_coding protein_coding MGP_LPJ_T0028138.1 MGP_LPJ_G0017990.1 mouse_genomes_project 11 20656640 20682813 - MGP_LPJ_P0028138 B3gnt2 protein_coding protein_coding MGP_LPJ_T0028139.1 MGP_LPJ_G0017990.1 mouse_genomes_project 11 20656758 20683200 - MGP_LPJ_P0028139 B3gnt2 protein_coding protein_coding MGP_LPJ_T0028140.1 MGP_LPJ_G0017990.1 mouse_genomes_project 11 20658476 20683665 - MGP_LPJ_P0028140 B3gnt2 protein_coding protein_coding MGP_LPJ_T0032184.1 MGP_LPJ_G0019018.1 mouse_genomes_project 11 102870731 102870884 - MGP_LPJ_P0032184 Gm14190 protein_coding protein_coding MGP_LPJ_T0017087.1 MGP_LPJ_G0015062.1 mouse_genomes_project 11 502154 508432 + Gm11946 processed_transcript processed_transcript MGP_LPJ_T0017088.1 MGP_LPJ_G0015062.1 mouse_genomes_project 11 502945 508854 + Gm11946 processed_transcript processed_transcript MGP_LPJ_T0033623.1 MGP_LPJ_G0019336.1 mouse_genomes_project 11 121173400 121183194 - MGP_LPJ_P0033623 Cygb protein_coding protein_coding MGP_LPJ_T0033274.1 MGP_LPJ_G0019274.1 mouse_genomes_project 11 119494436 119512837 - MGP_LPJ_P0033274 Cd300lf protein_coding protein_coding MGP_LPJ_T0033275.1 MGP_LPJ_G0019274.1 mouse_genomes_project 11 119494436 119512837 - MGP_LPJ_P0033275 Cd300lf protein_coding protein_coding MGP_LPJ_T0033276.1 MGP_LPJ_G0019274.1 mouse_genomes_project 11 119494436 119512837 - MGP_LPJ_P0033276 Cd300lf protein_coding protein_coding MGP_LPJ_T0033277.1 MGP_LPJ_G0019274.1 mouse_genomes_project 11 119495152 119512726 - MGP_LPJ_P0033277 Cd300lf protein_coding unknown_likely_coding MGP_LPJ_T0033278.1 MGP_LPJ_G0019274.1 mouse_genomes_project 11 119497006 119512836 - Cd300lf protein_coding processed_transcript MGP_LPJ_T0033279.1 MGP_LPJ_G0019274.1 mouse_genomes_project 11 119498409 119504971 - Cd300lf protein_coding processed_transcript MGP_LPJ_T0033280.1 MGP_LPJ_G0019274.1 mouse_genomes_project 11 119498493 119504918 - Cd300lf protein_coding processed_transcript MGP_LPJ_T0033281.1 MGP_LPJ_G0019274.1 mouse_genomes_project 11 119498505 119504912 - Cd300lf protein_coding processed_transcript MGP_LPJ_T0031311.1 MGP_LPJ_G0018785.1 mouse_genomes_project 11 87364427 87527515 + MGP_LPJ_P0031311 Bcas3 protein_coding protein_coding MGP_LPJ_T0031312.1 MGP_LPJ_G0018785.1 mouse_genomes_project 11 87364431 87852927 + MGP_LPJ_P0031312 Bcas3 protein_coding protein_coding MGP_LPJ_T0031313.1 MGP_LPJ_G0018785.1 mouse_genomes_project 11 87364445 87383137 + MGP_LPJ_P0031313 Bcas3 protein_coding protein_coding MGP_LPJ_T0031314.1 MGP_LPJ_G0018785.1 mouse_genomes_project 11 87364472 87852218 + MGP_LPJ_P0031314 Bcas3 protein_coding protein_coding MGP_LPJ_T0031315.1 MGP_LPJ_G0018785.1 mouse_genomes_project 11 87364472 87852218 + MGP_LPJ_P0031315 Bcas3 protein_coding protein_coding MGP_LPJ_T0031316.1 MGP_LPJ_G0018785.1 mouse_genomes_project 11 87482101 87852926 + MGP_LPJ_P0031316 Bcas3 protein_coding protein_coding MGP_LPJ_T0031317.1 MGP_LPJ_G0018785.1 mouse_genomes_project 11 87486694 87512908 + MGP_LPJ_P0031317 Bcas3 protein_coding protein_coding MGP_LPJ_T0031318.1 MGP_LPJ_G0018785.1 mouse_genomes_project 11 87508514 87511829 + Bcas3 protein_coding processed_transcript MGP_LPJ_T0031319.1 MGP_LPJ_G0018785.1 mouse_genomes_project 11 87526150 87852926 + MGP_LPJ_P0031319 Bcas3 protein_coding protein_coding MGP_LPJ_T0031320.1 MGP_LPJ_G0018785.1 mouse_genomes_project 11 87526161 87852926 + MGP_LPJ_P0031320 Bcas3 protein_coding protein_coding MGP_LPJ_T0031321.1 MGP_LPJ_G0018785.1 mouse_genomes_project 11 87599935 87623374 + Bcas3 protein_coding processed_transcript MGP_LPJ_T0031322.1 MGP_LPJ_G0018785.1 mouse_genomes_project 11 87662976 87852923 + Bcas3 protein_coding processed_transcript MGP_LPJ_T0031323.1 MGP_LPJ_G0018785.1 mouse_genomes_project 11 87827374 87852258 + MGP_LPJ_P0031323 Bcas3 protein_coding protein_coding MGP_LPJ_T0031324.1 MGP_LPJ_G0018785.1 mouse_genomes_project 11 87848280 87852514 + Bcas3 protein_coding processed_transcript MGP_LPJ_T0031325.1 MGP_LPJ_G0018785.1 mouse_genomes_project 11 87848833 87852175 + Bcas3 protein_coding processed_transcript MGP_LPJ_T0030496.1 MGP_LPJ_G0018581.1 mouse_genomes_project 11 75111522 75112461 - MGP_LPJ_P0030496 Olfr395 protein_coding protein_coding MGP_LPJ_T0009696.1 MGP_LPJ_G0007814.1 mouse_genomes_project 11 55498059 55498115 + Mir7652 miRNA miRNA MGP_LPJ_T0006361.1 MGP_LPJ_G0005302.1 mouse_genomes_project 11 106410244 106640120 + Gm26668 lincRNA lincRNA MGP_LPJ_T0034123.1 MGP_LPJ_G0019435.1 mouse_genomes_project 11 125623163 125730276 - MGP_LPJ_P0034123 Ccdc57 protein_coding protein_coding MGP_LPJ_T0034124.1 MGP_LPJ_G0019435.1 mouse_genomes_project 11 125623176 125673616 - Ccdc57 protein_coding processed_transcript MGP_LPJ_T0034125.1 MGP_LPJ_G0019435.1 mouse_genomes_project 11 125673736 125685682 - Ccdc57 protein_coding processed_transcript MGP_LPJ_T0003360.1 MGP_LPJ_G0003097.1 mouse_genomes_project 11 119869936 119871346 - Gm11695 antisense antisense MGP_LPJ_T0031512.1 MGP_LPJ_G0018832.1 mouse_genomes_project 11 91241215 91279409 + MGP_LPJ_P0031512 Coil protein_coding protein_coding MGP_LPJ_T0031513.1 MGP_LPJ_G0018832.1 mouse_genomes_project 11 91244927 91279409 + MGP_LPJ_P0031513 Coil protein_coding protein_coding MGP_LPJ_T0031514.1 MGP_LPJ_G0018832.1 mouse_genomes_project 11 91258115 91278750 + Coil protein_coding retained_intron MGP_LPJ_T0029121.1 MGP_LPJ_G0018247.1 mouse_genomes_project 11 57618115 57635766 + MGP_LPJ_P0029121 Mfap3 protein_coding protein_coding MGP_LPJ_T0029122.1 MGP_LPJ_G0018247.1 mouse_genomes_project 11 57618137 57631052 + Mfap3 protein_coding retained_intron MGP_LPJ_T0029123.1 MGP_LPJ_G0018247.1 mouse_genomes_project 11 57618138 57635765 + MGP_LPJ_P0029123 Mfap3 protein_coding protein_coding MGP_LPJ_T0029124.1 MGP_LPJ_G0018247.1 mouse_genomes_project 11 57623412 57631480 + MGP_LPJ_P0029124 Mfap3 protein_coding protein_coding MGP_LPJ_T0009766.1 MGP_LPJ_G0007884.1 mouse_genomes_project 11 106188891 106189000 - Gm22920 miRNA miRNA MGP_LPJ_T0003385.1 MGP_LPJ_G0003117.1 mouse_genomes_project 11 125475540 125495398 - Gm17178 antisense antisense MGP_LPJ_T0098472.1 MGP_LPJ_G0036752.1 mouse_genomes_project 11 313352 314695 - Gm11948 sense_intronic sense_intronic MGP_LPJ_T0031535.1 MGP_LPJ_G0018842.1 mouse_genomes_project 11 92676794 92732778 - MGP_LPJ_P0031535 Hlf protein_coding protein_coding MGP_LPJ_T0031536.1 MGP_LPJ_G0018842.1 mouse_genomes_project 11 92679247 92731529 - Hlf protein_coding processed_transcript MGP_LPJ_T0031537.1 MGP_LPJ_G0018842.1 mouse_genomes_project 11 92679399 92729038 - Hlf protein_coding processed_transcript MGP_LPJ_T0031538.1 MGP_LPJ_G0018842.1 mouse_genomes_project 11 92681085 92722965 - Hlf protein_coding processed_transcript MGP_LPJ_T0031539.1 MGP_LPJ_G0018842.1 mouse_genomes_project 11 92685809 92728801 - MGP_LPJ_P0031539 Hlf protein_coding protein_coding MGP_LPJ_T0031540.1 MGP_LPJ_G0018842.1 mouse_genomes_project 11 92728750 92731429 - Hlf protein_coding processed_transcript MGP_LPJ_T0032811.1 MGP_LPJ_G0019166.1 mouse_genomes_project 11 107218935 107226716 - MGP_LPJ_P0032811 Lyzl6 protein_coding protein_coding MGP_LPJ_T0032812.1 MGP_LPJ_G0019166.1 mouse_genomes_project 11 107218938 107226727 - MGP_LPJ_P0032812 Lyzl6 protein_coding protein_coding MGP_LPJ_T0032813.1 MGP_LPJ_G0019166.1 mouse_genomes_project 11 107218941 107222856 - Lyzl6 protein_coding processed_transcript MGP_LPJ_T0012729.1 MGP_LPJ_G0010820.1 mouse_genomes_project 11 102971760 102971928 - processed_pseudogene processed_pseudogene MGP_LPJ_T0030473.1 MGP_LPJ_G0018566.1 mouse_genomes_project 11 74532233 74548965 + MGP_LPJ_P0030473 Spata22 protein_coding protein_coding MGP_LPJ_T0030474.1 MGP_LPJ_G0018566.1 mouse_genomes_project 11 74532233 74559334 + MGP_LPJ_P0030474 Spata22 protein_coding protein_coding MGP_LPJ_T0012675.1 MGP_LPJ_G0010766.1 mouse_genomes_project 11 79243808 79245778 + processed_pseudogene processed_pseudogene MGP_LPJ_T0031510.1 MGP_LPJ_G0018830.1 mouse_genomes_project 11 91186488 91223132 - MGP_LPJ_P0031510 Scpep1 protein_coding protein_coding MGP_LPJ_T0000875.1 MGP_LPJ_G0000804.1 mouse_genomes_project 11 16467777 16470946 - TEC TEC MGP_LPJ_T0032374.1 MGP_LPJ_G0019082.1 mouse_genomes_project 11 104457002 104481453 - Fam134c protein_coding processed_transcript MGP_LPJ_T0032375.1 MGP_LPJ_G0019082.1 mouse_genomes_project 11 104457193 104481453 - MGP_LPJ_P0032375 Fam134c protein_coding protein_coding MGP_LPJ_T0032376.1 MGP_LPJ_G0019082.1 mouse_genomes_project 11 104457199 104481267 - MGP_LPJ_P0032376 Fam134c protein_coding protein_coding MGP_LPJ_T0032377.1 MGP_LPJ_G0019082.1 mouse_genomes_project 11 104458680 104481325 - Fam134c protein_coding processed_transcript MGP_LPJ_T0032378.1 MGP_LPJ_G0019082.1 mouse_genomes_project 11 104459263 104481453 - Fam134c protein_coding processed_transcript MGP_LPJ_T0028590.1 MGP_LPJ_G0018099.1 mouse_genomes_project 11 45344812 45471495 - MGP_LPJ_P0028590 Cyfip2 protein_coding protein_coding MGP_LPJ_T0028591.1 MGP_LPJ_G0018099.1 mouse_genomes_project 11 45344812 45470994 - MGP_LPJ_P0028591 Cyfip2 protein_coding protein_coding MGP_LPJ_T0028592.1 MGP_LPJ_G0018099.1 mouse_genomes_project 11 45344817 45470930 - MGP_LPJ_P0028592 Cyfip2 protein_coding protein_coding MGP_LPJ_T0028593.1 MGP_LPJ_G0018099.1 mouse_genomes_project 11 45347033 45427691 - MGP_LPJ_P0028593 Cyfip2 protein_coding protein_coding MGP_LPJ_T0028595.1 MGP_LPJ_G0018099.1 mouse_genomes_project 11 45450191 45470856 - MGP_LPJ_P0028595 Cyfip2 protein_coding protein_coding MGP_LPJ_T0030713.1 MGP_LPJ_G0018636.1 mouse_genomes_project 11 77659568 77805574 - MGP_LPJ_P0030713 Nxn protein_coding protein_coding MGP_LPJ_T0030714.1 MGP_LPJ_G0018636.1 mouse_genomes_project 11 77762895 77805502 - Nxn protein_coding processed_transcript MGP_LPJ_T0030275.1 MGP_LPJ_G0018521.1 mouse_genomes_project 11 71927409 71935703 - MGP_LPJ_P0030275 Scimp protein_coding protein_coding MGP_LPJ_T0006299.1 MGP_LPJ_G0005261.1 mouse_genomes_project 11 77101161 77117738 - Gm26836 lincRNA lincRNA MGP_LPJ_T0012579.1 MGP_LPJ_G0010670.1 mouse_genomes_project 11 47822088 47822749 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003289.1 MGP_LPJ_G0003040.1 mouse_genomes_project 11 98488629 98503649 - Zfp652os antisense antisense MGP_LPJ_T0034083.1 MGP_LPJ_G0019427.1 mouse_genomes_project 11 125499873 125507567 + MGP_LPJ_P0034083 Lrrc45 protein_coding protein_coding MGP_LPJ_T0034084.1 MGP_LPJ_G0019427.1 mouse_genomes_project 11 125499899 125507562 + MGP_LPJ_P0034084 Lrrc45 protein_coding nonsense_mediated_decay MGP_LPJ_T0034085.1 MGP_LPJ_G0019427.1 mouse_genomes_project 11 125499926 125501503 + MGP_LPJ_P0034085 Lrrc45 protein_coding protein_coding MGP_LPJ_T0034086.1 MGP_LPJ_G0019427.1 mouse_genomes_project 11 125503463 125505921 + Lrrc45 protein_coding retained_intron MGP_LPJ_T0034087.1 MGP_LPJ_G0019427.1 mouse_genomes_project 11 125505679 125507351 + Lrrc45 protein_coding retained_intron MGP_LPJ_T0000876.1 MGP_LPJ_G0000805.1 mouse_genomes_project 11 16471420 16472977 - TEC TEC MGP_LPJ_T0012711.1 MGP_LPJ_G0010802.1 mouse_genomes_project 11 95307899 95308480 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098887.1 MGP_LPJ_G0037150.1 mouse_genomes_project 11 14281577 14281684 - Gm25698 snRNA snRNA MGP_LPJ_T0009671.1 MGP_LPJ_G0007789.1 mouse_genomes_project 11 21900445 21900565 + Gm44381 miRNA miRNA MGP_LPJ_T0012493.1 MGP_LPJ_G0010584.1 mouse_genomes_project 11 15910070 15912003 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098922.1 MGP_LPJ_G0037185.1 mouse_genomes_project 11 81216857 81216961 + Gm23293 snRNA snRNA MGP_LPJ_T0030558.1 MGP_LPJ_G0018604.1 mouse_genomes_project 11 76206495 76213365 + MGP_LPJ_P0030558 Tsr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0030559.1 MGP_LPJ_G0018604.1 mouse_genomes_project 11 76206502 76217767 + MGP_LPJ_P0030559 Tsr1 protein_coding protein_coding MGP_LPJ_T0030560.1 MGP_LPJ_G0018604.1 mouse_genomes_project 11 76206522 76210280 + Tsr1 protein_coding retained_intron MGP_LPJ_T0030561.1 MGP_LPJ_G0018604.1 mouse_genomes_project 11 76206538 76216919 + MGP_LPJ_P0030561 Tsr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0030562.1 MGP_LPJ_G0018604.1 mouse_genomes_project 11 76210137 76212330 + Tsr1 protein_coding retained_intron MGP_LPJ_T0030563.1 MGP_LPJ_G0018604.1 mouse_genomes_project 11 76212394 76216739 + MGP_LPJ_P0030563 Tsr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0030564.1 MGP_LPJ_G0018604.1 mouse_genomes_project 11 76213635 76216768 + Tsr1 protein_coding retained_intron MGP_LPJ_T0012749.1 MGP_LPJ_G0010840.1 mouse_genomes_project 11 108845899 108847744 - processed_pseudogene processed_pseudogene MGP_LPJ_T0028301.1 MGP_LPJ_G0018022.1 mouse_genomes_project 11 28016776 28327771 - MGP_LPJ_P0028301 Eml6 protein_coding protein_coding MGP_LPJ_T0028302.1 MGP_LPJ_G0018022.1 mouse_genomes_project 11 28017862 28040486 - Eml6 protein_coding retained_intron MGP_LPJ_T0028303.1 MGP_LPJ_G0018022.1 mouse_genomes_project 11 28020378 28027861 - Eml6 protein_coding retained_intron MGP_LPJ_T0028304.1 MGP_LPJ_G0018022.1 mouse_genomes_project 11 28021193 28025914 - Eml6 protein_coding retained_intron MGP_LPJ_T0028305.1 MGP_LPJ_G0018022.1 mouse_genomes_project 11 28026351 28036519 - MGP_LPJ_P0028305 Eml6 protein_coding nonsense_mediated_decay MGP_LPJ_T0028306.1 MGP_LPJ_G0018022.1 mouse_genomes_project 11 28079289 28080400 - Eml6 protein_coding retained_intron MGP_LPJ_T0028307.1 MGP_LPJ_G0018022.1 mouse_genomes_project 11 28086621 28098939 - MGP_LPJ_P0028307 Eml6 protein_coding nonsense_mediated_decay MGP_LPJ_T0028404.1 MGP_LPJ_G0018047.1 mouse_genomes_project 11 31032262 31125905 + MGP_LPJ_P0028404 Stk10 protein_coding protein_coding MGP_LPJ_T0028405.1 MGP_LPJ_G0018047.1 mouse_genomes_project 11 31088272 31098104 + Stk10 protein_coding retained_intron MGP_LPJ_T0027739.1 MGP_LPJ_G0017896.1 mouse_genomes_project 11 1770152 1772503 - MGP_LPJ_P0027739 Uqcr10 protein_coding protein_coding MGP_LPJ_T0027740.1 MGP_LPJ_G0017896.1 mouse_genomes_project 11 1770154 1772495 - Uqcr10 protein_coding processed_transcript MGP_LPJ_T0027741.1 MGP_LPJ_G0017896.1 mouse_genomes_project 11 1770161 1772214 - Uqcr10 protein_coding processed_transcript MGP_LPJ_T0012717.1 MGP_LPJ_G0010808.1 mouse_genomes_project 11 98559023 98559198 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009676.1 MGP_LPJ_G0007794.1 mouse_genomes_project 11 27003772 27003844 + Mir216a miRNA miRNA MGP_LPJ_T0006305.1 MGP_LPJ_G0005267.1 mouse_genomes_project 11 81411329 81412238 - 9130204K15Rik lincRNA lincRNA MGP_LPJ_T0006306.1 MGP_LPJ_G0005267.1 mouse_genomes_project 11 81411396 81504960 - 9130204K15Rik lincRNA lincRNA MGP_LPJ_T0006307.1 MGP_LPJ_G0005267.1 mouse_genomes_project 11 81411859 81490390 - 9130204K15Rik lincRNA lincRNA MGP_LPJ_T0006308.1 MGP_LPJ_G0005267.1 mouse_genomes_project 11 81425703 81434681 - 9130204K15Rik lincRNA lincRNA MGP_LPJ_T0029971.1 MGP_LPJ_G0018461.1 mouse_genomes_project 11 70848168 70850191 - MGP_LPJ_P0029971 Tmem102 protein_coding protein_coding MGP_LPJ_T0003158.1 MGP_LPJ_G0002931.1 mouse_genomes_project 11 28402096 28403824 + Gm29237 antisense antisense MGP_LPJ_T0029107.1 MGP_LPJ_G0018242.1 mouse_genomes_project 11 55465776 55501666 + MGP_LPJ_P0029107 G3bp1 protein_coding protein_coding MGP_LPJ_T0029108.1 MGP_LPJ_G0018242.1 mouse_genomes_project 11 55465809 55484358 + G3bp1 protein_coding processed_transcript MGP_LPJ_T0032310.1 MGP_LPJ_G0019068.1 mouse_genomes_project 11 104042158 104069398 - MGP_LPJ_P0032310 Rab5c protein_coding protein_coding MGP_LPJ_T0032311.1 MGP_LPJ_G0019068.1 mouse_genomes_project 11 104042160 104069398 - MGP_LPJ_P0032311 Rab5c protein_coding protein_coding MGP_LPJ_T0032312.1 MGP_LPJ_G0019068.1 mouse_genomes_project 11 104045649 104058091 - MGP_LPJ_P0032312 Rab5c protein_coding protein_coding MGP_LPJ_T0032313.1 MGP_LPJ_G0019068.1 mouse_genomes_project 11 104047825 104069359 - MGP_LPJ_P0032313 Rab5c protein_coding protein_coding MGP_LPJ_T0033869.1 MGP_LPJ_G0019388.1 mouse_genomes_project 11 124267429 124276464 - MGP_LPJ_P0033869 Nptx1 protein_coding protein_coding MGP_LPJ_T0034002.1 MGP_LPJ_G0019414.1 mouse_genomes_project 11 125335291 125348122 - MGP_LPJ_P0034002 P4hb protein_coding protein_coding MGP_LPJ_T0034003.1 MGP_LPJ_G0019414.1 mouse_genomes_project 11 125335298 125336230 - P4hb protein_coding processed_transcript MGP_LPJ_T0034004.1 MGP_LPJ_G0019414.1 mouse_genomes_project 11 125335938 125347710 - MGP_LPJ_P0034004 P4hb protein_coding protein_coding MGP_LPJ_T0028859.1 MGP_LPJ_G0018179.1 mouse_genomes_project 11 51291803 51297493 + MGP_LPJ_P0028859 Nhp2 protein_coding protein_coding MGP_LPJ_T0028860.1 MGP_LPJ_G0018179.1 mouse_genomes_project 11 51291839 51297208 + Nhp2 protein_coding retained_intron MGP_LPJ_T0012456.1 MGP_LPJ_G0010547.1 mouse_genomes_project 11 2005952 2006446 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098916.1 MGP_LPJ_G0037179.1 mouse_genomes_project 11 74039897 74040059 + Gm26121 snRNA snRNA MGP_LPJ_T0003317.1 MGP_LPJ_G0003060.1 mouse_genomes_project 11 104652926 104654452 - Gm11615 antisense antisense MGP_LPJ_T0006245.1 MGP_LPJ_G0005216.1 mouse_genomes_project 11 43010871 43195515 + Gm12153 lincRNA lincRNA MGP_LPJ_T0034101.1 MGP_LPJ_G0019432.1 mouse_genomes_project 11 125571942 125577651 + Gps1 protein_coding retained_intron MGP_LPJ_T0034102.1 MGP_LPJ_G0019432.1 mouse_genomes_project 11 125571945 125581324 + MGP_LPJ_P0034102 Gps1 protein_coding protein_coding MGP_LPJ_T0034103.1 MGP_LPJ_G0019432.1 mouse_genomes_project 11 125571945 125581010 + MGP_LPJ_P0034103 Gps1 protein_coding nonsense_mediated_decay MGP_LPJ_T0034104.1 MGP_LPJ_G0019432.1 mouse_genomes_project 11 125571975 125581329 + MGP_LPJ_P0034104 Gps1 protein_coding protein_coding MGP_LPJ_T0034105.1 MGP_LPJ_G0019432.1 mouse_genomes_project 11 125572852 125581329 + MGP_LPJ_P0034105 Gps1 protein_coding protein_coding MGP_LPJ_T0034106.1 MGP_LPJ_G0019432.1 mouse_genomes_project 11 125572885 125581298 + MGP_LPJ_P0034106 Gps1 protein_coding unknown_likely_coding MGP_LPJ_T0034107.1 MGP_LPJ_G0019432.1 mouse_genomes_project 11 125578089 125579079 + Gps1 protein_coding retained_intron MGP_LPJ_T0028337.1 MGP_LPJ_G0018030.1 mouse_genomes_project 11 29336848 29346384 - MGP_LPJ_P0028337 Chac2 protein_coding protein_coding MGP_LPJ_T0028338.1 MGP_LPJ_G0018030.1 mouse_genomes_project 11 29337093 29346368 - MGP_LPJ_P0028338 Chac2 protein_coding protein_coding MGP_LPJ_T0012639.1 MGP_LPJ_G0010730.1 mouse_genomes_project 11 65764530 65765020 - processed_pseudogene processed_pseudogene MGP_LPJ_T0031883.1 MGP_LPJ_G0018929.1 mouse_genomes_project 11 100052731 100066271 - MGP_LPJ_P0031883 Tbkbp1 protein_coding protein_coding MGP_LPJ_T0031884.1 MGP_LPJ_G0018929.1 mouse_genomes_project 11 100052733 100066271 - MGP_LPJ_P0031884 Tbkbp1 protein_coding protein_coding MGP_LPJ_T0031885.1 MGP_LPJ_G0018929.1 mouse_genomes_project 11 100052737 100066605 - MGP_LPJ_P0031885 Tbkbp1 protein_coding protein_coding MGP_LPJ_T0031886.1 MGP_LPJ_G0018929.1 mouse_genomes_project 11 100053659 100067595 - MGP_LPJ_P0031886 Tbkbp1 protein_coding protein_coding MGP_LPJ_T0031887.1 MGP_LPJ_G0018929.1 mouse_genomes_project 11 100054966 100066607 - MGP_LPJ_P0031887 Tbkbp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0003141.1 MGP_LPJ_G0002919.1 mouse_genomes_project 11 9092590 9093897 - Gm12000 antisense antisense MGP_LPJ_T0034010.1 MGP_LPJ_G0019417.1 mouse_genomes_project 11 125375606 125385308 + MGP_LPJ_P0034010 Anapc11 protein_coding protein_coding MGP_LPJ_T0034011.1 MGP_LPJ_G0019417.1 mouse_genomes_project 11 125375625 125377873 + Anapc11 protein_coding retained_intron MGP_LPJ_T0034012.1 MGP_LPJ_G0019417.1 mouse_genomes_project 11 125375717 125382883 + MGP_LPJ_P0034012 Anapc11 protein_coding protein_coding MGP_LPJ_T0034013.1 MGP_LPJ_G0019417.1 mouse_genomes_project 11 125381042 125382599 + Anapc11 protein_coding processed_transcript MGP_LPJ_T0034159.1 MGP_LPJ_G0019443.1 mouse_genomes_project 11 125974667 125976370 + MGP_LPJ_P0034159 Uts2r protein_coding protein_coding MGP_LPJ_T0032837.1 MGP_LPJ_G0019175.1 mouse_genomes_project 11 107844930 107951562 + MGP_LPJ_P0032837 protein_coding protein_coding MGP_LPJ_T0032838.1 MGP_LPJ_G0019175.1 mouse_genomes_project 11 107845019 107911835 + protein_coding retained_intron MGP_LPJ_T0032839.1 MGP_LPJ_G0019175.1 mouse_genomes_project 11 107845024 107926248 + MGP_LPJ_P0032839 protein_coding protein_coding MGP_LPJ_T0032840.1 MGP_LPJ_G0019175.1 mouse_genomes_project 11 107845055 107947909 + MGP_LPJ_P0032840 protein_coding protein_coding MGP_LPJ_T0032841.1 MGP_LPJ_G0019175.1 mouse_genomes_project 11 107845113 107926332 + MGP_LPJ_P0032841 protein_coding protein_coding MGP_LPJ_T0032842.1 MGP_LPJ_G0019175.1 mouse_genomes_project 11 107845119 107926308 + protein_coding processed_transcript MGP_LPJ_T0032843.1 MGP_LPJ_G0019175.1 mouse_genomes_project 11 107845121 107911442 + MGP_LPJ_P0032843 protein_coding protein_coding MGP_LPJ_T0032844.1 MGP_LPJ_G0019175.1 mouse_genomes_project 11 107845124 107947694 + MGP_LPJ_P0032844 protein_coding protein_coding MGP_LPJ_T0032845.1 MGP_LPJ_G0019175.1 mouse_genomes_project 11 107896483 107947662 + MGP_LPJ_P0032845 protein_coding protein_coding MGP_LPJ_T0032846.1 MGP_LPJ_G0019175.1 mouse_genomes_project 11 107896483 107947662 + MGP_LPJ_P0032846 protein_coding protein_coding MGP_LPJ_T0032847.1 MGP_LPJ_G0019175.1 mouse_genomes_project 11 107937749 107947716 + protein_coding processed_transcript MGP_LPJ_T0032848.1 MGP_LPJ_G0019175.1 mouse_genomes_project 11 107941677 107947685 + protein_coding processed_transcript MGP_LPJ_T0003326.1 MGP_LPJ_G0003069.1 mouse_genomes_project 11 105866557 105868029 - Bloodlinc antisense antisense MGP_LPJ_T0032294.1 MGP_LPJ_G0019064.1 mouse_genomes_project 11 103956636 103981466 - MGP_LPJ_P0032294 Zfp385c protein_coding protein_coding MGP_LPJ_T0032295.1 MGP_LPJ_G0019064.1 mouse_genomes_project 11 103959054 103982457 - Zfp385c protein_coding processed_transcript MGP_LPJ_T0032296.1 MGP_LPJ_G0019064.1 mouse_genomes_project 11 103959817 103990288 - MGP_LPJ_P0032296 Zfp385c protein_coding protein_coding MGP_LPJ_T0032297.1 MGP_LPJ_G0019064.1 mouse_genomes_project 11 103967613 104018519 - MGP_LPJ_P0032297 Zfp385c protein_coding protein_coding MGP_LPJ_T0032723.1 MGP_LPJ_G0019147.1 mouse_genomes_project 11 106384344 106428522 - MGP_LPJ_P0032723 Eftud2 protein_coding protein_coding MGP_LPJ_T0032724.1 MGP_LPJ_G0019147.1 mouse_genomes_project 11 106384344 106428540 - MGP_LPJ_P0032724 Eftud2 protein_coding protein_coding MGP_LPJ_T0032725.1 MGP_LPJ_G0019147.1 mouse_genomes_project 11 106384348 106390097 - MGP_LPJ_P0032725 Eftud2 protein_coding protein_coding MGP_LPJ_T0032726.1 MGP_LPJ_G0019147.1 mouse_genomes_project 11 106384672 106425257 - MGP_LPJ_P0032726 Eftud2 protein_coding protein_coding MGP_LPJ_T0032727.1 MGP_LPJ_G0019147.1 mouse_genomes_project 11 106384709 106387118 - MGP_LPJ_P0032727 Eftud2 protein_coding nonsense_mediated_decay MGP_LPJ_T0032728.1 MGP_LPJ_G0019147.1 mouse_genomes_project 11 106385321 106386547 - Eftud2 protein_coding retained_intron MGP_LPJ_T0032729.1 MGP_LPJ_G0019147.1 mouse_genomes_project 11 106386082 106393856 - Eftud2 protein_coding retained_intron MGP_LPJ_T0032730.1 MGP_LPJ_G0019147.1 mouse_genomes_project 11 106395070 106407108 - Eftud2 protein_coding retained_intron MGP_LPJ_T0032731.1 MGP_LPJ_G0019147.1 mouse_genomes_project 11 106409504 106425233 - MGP_LPJ_P0032731 Eftud2 protein_coding nonsense_mediated_decay MGP_LPJ_T0032732.1 MGP_LPJ_G0019147.1 mouse_genomes_project 11 106410772 106412895 - Eftud2 protein_coding retained_intron MGP_LPJ_T0032733.1 MGP_LPJ_G0019147.1 mouse_genomes_project 11 106412787 106428519 - Eftud2 protein_coding retained_intron MGP_LPJ_T0032734.1 MGP_LPJ_G0019147.1 mouse_genomes_project 11 106418149 106425258 - Eftud2 protein_coding retained_intron MGP_LPJ_T0032735.1 MGP_LPJ_G0019147.1 mouse_genomes_project 11 106424506 106428490 - Eftud2 protein_coding retained_intron MGP_LPJ_T0028673.1 MGP_LPJ_G0018129.1 mouse_genomes_project 11 48546680 48568241 - MGP_LPJ_P0028673 Btnl9 protein_coding protein_coding MGP_LPJ_T0028674.1 MGP_LPJ_G0018129.1 mouse_genomes_project 11 48550137 48568127 - MGP_LPJ_P0028674 Btnl9 protein_coding protein_coding MGP_LPJ_T0028675.1 MGP_LPJ_G0018129.1 mouse_genomes_project 11 48550405 48551759 - Btnl9 protein_coding retained_intron MGP_LPJ_T0028676.1 MGP_LPJ_G0018129.1 mouse_genomes_project 11 48555909 48568119 - MGP_LPJ_P0028676 Btnl9 protein_coding protein_coding MGP_LPJ_T0028677.1 MGP_LPJ_G0018129.1 mouse_genomes_project 11 48563378 48568149 - Btnl9 protein_coding processed_transcript MGP_LPJ_T0032330.1 MGP_LPJ_G0019074.1 mouse_genomes_project 11 104227185 104284007 - MGP_LPJ_P0032330 Stat3 protein_coding protein_coding MGP_LPJ_T0032331.1 MGP_LPJ_G0019074.1 mouse_genomes_project 11 104228601 104230692 - Stat3 protein_coding retained_intron MGP_LPJ_T0032332.1 MGP_LPJ_G0019074.1 mouse_genomes_project 11 104228615 104283996 - MGP_LPJ_P0032332 Stat3 protein_coding protein_coding MGP_LPJ_T0032333.1 MGP_LPJ_G0019074.1 mouse_genomes_project 11 104229060 104284095 - MGP_LPJ_P0032333 Stat3 protein_coding protein_coding MGP_LPJ_T0032334.1 MGP_LPJ_G0019074.1 mouse_genomes_project 11 104229857 104234123 - Stat3 protein_coding retained_intron MGP_LPJ_T0032335.1 MGP_LPJ_G0019074.1 mouse_genomes_project 11 104233408 104234182 - Stat3 protein_coding retained_intron MGP_LPJ_T0032336.1 MGP_LPJ_G0019074.1 mouse_genomes_project 11 104233903 104234813 - Stat3 protein_coding retained_intron MGP_LPJ_T0032337.1 MGP_LPJ_G0019074.1 mouse_genomes_project 11 104234350 104239384 - Stat3 protein_coding processed_transcript MGP_LPJ_T0032338.1 MGP_LPJ_G0019074.1 mouse_genomes_project 11 104234867 104235502 - Stat3 protein_coding retained_intron MGP_LPJ_T0032339.1 MGP_LPJ_G0019074.1 mouse_genomes_project 11 104234869 104238605 - Stat3 protein_coding retained_intron MGP_LPJ_T0032340.1 MGP_LPJ_G0019074.1 mouse_genomes_project 11 104242813 104245467 - Stat3 protein_coding retained_intron MGP_LPJ_T0032341.1 MGP_LPJ_G0019074.1 mouse_genomes_project 11 104245135 104245902 - Stat3 protein_coding retained_intron MGP_LPJ_T0032342.1 MGP_LPJ_G0019074.1 mouse_genomes_project 11 104245711 104248280 - Stat3 protein_coding retained_intron MGP_LPJ_T0029395.1 MGP_LPJ_G0018335.1 mouse_genomes_project 11 61284040 61310098 - MGP_LPJ_P0029395 Shmt1 protein_coding protein_coding MGP_LPJ_T0029396.1 MGP_LPJ_G0018335.1 mouse_genomes_project 11 61284838 61296498 - Shmt1 protein_coding processed_transcript MGP_LPJ_T0029397.1 MGP_LPJ_G0018335.1 mouse_genomes_project 11 61285078 61305846 - MGP_LPJ_P0029397 Shmt1 protein_coding protein_coding MGP_LPJ_T0029398.1 MGP_LPJ_G0018335.1 mouse_genomes_project 11 61285078 61305846 - MGP_LPJ_P0029398 Shmt1 protein_coding protein_coding MGP_LPJ_T0029399.1 MGP_LPJ_G0018335.1 mouse_genomes_project 11 61285078 61305846 - MGP_LPJ_P0029399 Shmt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0029400.1 MGP_LPJ_G0018335.1 mouse_genomes_project 11 61285182 61292112 - Shmt1 protein_coding retained_intron MGP_LPJ_T0029401.1 MGP_LPJ_G0018335.1 mouse_genomes_project 11 61285530 61290286 - Shmt1 protein_coding retained_intron MGP_LPJ_T0029402.1 MGP_LPJ_G0018335.1 mouse_genomes_project 11 61290061 61294948 - Shmt1 protein_coding retained_intron MGP_LPJ_T0029403.1 MGP_LPJ_G0018335.1 mouse_genomes_project 11 61294339 61309924 - Shmt1 protein_coding retained_intron MGP_LPJ_T0029404.1 MGP_LPJ_G0018335.1 mouse_genomes_project 11 61295746 61299763 - Shmt1 protein_coding processed_transcript MGP_LPJ_T0029405.1 MGP_LPJ_G0018335.1 mouse_genomes_project 11 61301438 61310542 - Shmt1 protein_coding processed_transcript MGP_LPJ_T0028557.1 MGP_LPJ_G0018090.1 mouse_genomes_project 11 43542505 43557109 - MGP_LPJ_P0028557 Ublcp1 protein_coding protein_coding MGP_LPJ_T0028558.1 MGP_LPJ_G0018090.1 mouse_genomes_project 11 43543170 43548267 - Ublcp1 protein_coding processed_transcript MGP_LPJ_T0028559.1 MGP_LPJ_G0018090.1 mouse_genomes_project 11 43543281 43550729 - Ublcp1 protein_coding processed_transcript MGP_LPJ_T0028560.1 MGP_LPJ_G0018090.1 mouse_genomes_project 11 43552254 43553708 - Ublcp1 protein_coding processed_transcript MGP_LPJ_T0003332.1 MGP_LPJ_G0003075.1 mouse_genomes_project 11 108194066 108195056 - Gm11665 antisense antisense MGP_LPJ_T0032035.1 MGP_LPJ_G0018963.1 mouse_genomes_project 11 101433550 101459943 + MGP_LPJ_P0032035 Erbb2 protein_coding protein_coding MGP_LPJ_T0032036.1 MGP_LPJ_G0018963.1 mouse_genomes_project 11 101433573 101459303 + Erbb2 protein_coding processed_transcript MGP_LPJ_T0032037.1 MGP_LPJ_G0018963.1 mouse_genomes_project 11 101448073 101448566 + Erbb2 protein_coding processed_transcript MGP_LPJ_T0031116.1 MGP_LPJ_G0018733.1 mouse_genomes_project 11 84574454 84596209 + MGP_LPJ_P0031116 Lig3 protein_coding protein_coding MGP_LPJ_T0031117.1 MGP_LPJ_G0018733.1 mouse_genomes_project 11 84574481 84597621 + MGP_LPJ_P0031117 Lig3 protein_coding protein_coding MGP_LPJ_T0031118.1 MGP_LPJ_G0018733.1 mouse_genomes_project 11 84574488 84589888 + Lig3 protein_coding retained_intron MGP_LPJ_T0031119.1 MGP_LPJ_G0018733.1 mouse_genomes_project 11 84574531 84594000 + MGP_LPJ_P0031119 Lig3 protein_coding protein_coding MGP_LPJ_T0031120.1 MGP_LPJ_G0018733.1 mouse_genomes_project 11 84574539 84595373 + MGP_LPJ_P0031120 Lig3 protein_coding protein_coding MGP_LPJ_T0031121.1 MGP_LPJ_G0018733.1 mouse_genomes_project 11 84574539 84595372 + MGP_LPJ_P0031121 Lig3 protein_coding protein_coding MGP_LPJ_T0031122.1 MGP_LPJ_G0018733.1 mouse_genomes_project 11 84574544 84583651 + MGP_LPJ_P0031122 Lig3 protein_coding protein_coding MGP_LPJ_T0031123.1 MGP_LPJ_G0018733.1 mouse_genomes_project 11 84574544 84583652 + MGP_LPJ_P0031123 Lig3 protein_coding protein_coding MGP_LPJ_T0031124.1 MGP_LPJ_G0018733.1 mouse_genomes_project 11 84574549 84597545 + MGP_LPJ_P0031124 Lig3 protein_coding protein_coding MGP_LPJ_T0031125.1 MGP_LPJ_G0018733.1 mouse_genomes_project 11 84589031 84592897 + Lig3 protein_coding retained_intron MGP_LPJ_T0031126.1 MGP_LPJ_G0018733.1 mouse_genomes_project 11 84590564 84592914 + Lig3 protein_coding retained_intron MGP_LPJ_T0031127.1 MGP_LPJ_G0018733.1 mouse_genomes_project 11 84591695 84597621 + MGP_LPJ_P0031127 Lig3 protein_coding protein_coding MGP_LPJ_T0030511.1 MGP_LPJ_G0018589.1 mouse_genomes_project 11 75358202 75359214 + MGP_LPJ_P0030511 Olfr402 protein_coding protein_coding MGP_LPJ_T0012473.1 MGP_LPJ_G0010564.1 mouse_genomes_project 11 6425382 6426541 - processed_pseudogene processed_pseudogene MGP_LPJ_T0033284.1 MGP_LPJ_G0019275.1 mouse_genomes_project 11 119543108 119562280 + MGP_LPJ_P0033284 Slc9a3r1 protein_coding protein_coding MGP_LPJ_T0029705.1 MGP_LPJ_G0018400.1 mouse_genomes_project 11 68581644 68589675 + MGP_LPJ_P0029705 Rcvrn protein_coding protein_coding MGP_LPJ_T0003239.1 MGP_LPJ_G0003001.1 mouse_genomes_project 11 70321921 70324215 - Kcnab3os antisense antisense MGP_LPJ_T0033304.1 MGP_LPJ_G0019280.1 mouse_genomes_project 11 119672052 119695091 - MGP_LPJ_P0033304 Fads6 protein_coding protein_coding MGP_LPJ_T0033305.1 MGP_LPJ_G0019280.1 mouse_genomes_project 11 119690465 119695240 - Fads6 protein_coding processed_transcript MGP_LPJ_T0027985.1 MGP_LPJ_G0017953.1 mouse_genomes_project 11 8676328 8841905 - MGP_LPJ_P0027985 Zpbp protein_coding protein_coding MGP_LPJ_T0028052.1 MGP_LPJ_G0017967.1 mouse_genomes_project 11 14735464 14791898 + Wdr92 protein_coding processed_transcript MGP_LPJ_T0028056.1 MGP_LPJ_G0017967.1 mouse_genomes_project 11 14765681 14792782 + MGP_LPJ_P0028056 Wdr92 protein_coding protein_coding MGP_LPJ_T0031205.1 MGP_LPJ_G0018760.1 mouse_genomes_project 11 85568195 85570304 + MGP_LPJ_P0031205 Ccl4 protein_coding protein_coding MGP_LPJ_T0006292.1 MGP_LPJ_G0005256.1 mouse_genomes_project 11 72806192 72808227 - Gm12325 lincRNA lincRNA MGP_LPJ_T0003284.1 MGP_LPJ_G0003035.1 mouse_genomes_project 11 97781248 97786773 + Gm11513 antisense antisense MGP_LPJ_T0012528.1 MGP_LPJ_G0010619.1 mouse_genomes_project 11 25434312 25434710 - processed_pseudogene processed_pseudogene MGP_LPJ_T0028071.1 MGP_LPJ_G0017972.1 mouse_genomes_project 11 17576796 17682640 + MGP_LPJ_P0028071 Spred2 protein_coding protein_coding MGP_LPJ_T0028072.1 MGP_LPJ_G0017972.1 mouse_genomes_project 11 17576863 17681222 + MGP_LPJ_P0028072 Spred2 protein_coding protein_coding MGP_LPJ_T0028073.1 MGP_LPJ_G0017972.1 mouse_genomes_project 11 17608116 17674991 + MGP_LPJ_P0028073 Spred2 protein_coding protein_coding MGP_LPJ_T0012684.1 MGP_LPJ_G0010775.1 mouse_genomes_project 11 81534198 81534345 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009786.1 MGP_LPJ_G0007904.1 mouse_genomes_project 11 124755558 124755645 + Mir3065 miRNA miRNA MGP_LPJ_T0009790.1 MGP_LPJ_G0007908.1 mouse_genomes_project 11 125406817 125406871 - Mir6936 miRNA miRNA MGP_LPJ_T0028448.1 MGP_LPJ_G0018062.1 mouse_genomes_project 11 32914744 33021825 + MGP_LPJ_P0028448 Fam196b protein_coding protein_coding MGP_LPJ_T0028449.1 MGP_LPJ_G0018062.1 mouse_genomes_project 11 32914744 33021824 + MGP_LPJ_P0028449 Fam196b protein_coding protein_coding MGP_LPJ_T0032957.1 MGP_LPJ_G0019202.1 mouse_genomes_project 11 109984506 109994156 + MGP_LPJ_P0032957 Psmc5 protein_coding nonsense_mediated_decay MGP_LPJ_T0032958.1 MGP_LPJ_G0019202.1 mouse_genomes_project 11 109984506 109994156 + MGP_LPJ_P0032958 Psmc5 protein_coding protein_coding MGP_LPJ_T0032959.1 MGP_LPJ_G0019202.1 mouse_genomes_project 11 109984543 109994160 + MGP_LPJ_P0032959 Psmc5 protein_coding unknown_likely_coding MGP_LPJ_T0032441.1 MGP_LPJ_G0019095.1 mouse_genomes_project 11 104704435 104708229 + MGP_LPJ_P0032441 Psme3 protein_coding protein_coding MGP_LPJ_T0032442.1 MGP_LPJ_G0019095.1 mouse_genomes_project 11 104704435 104711837 + MGP_LPJ_P0032442 Psme3 protein_coding protein_coding MGP_LPJ_T0032443.1 MGP_LPJ_G0019095.1 mouse_genomes_project 11 104705199 104708815 + MGP_LPJ_P0032443 Psme3 protein_coding protein_coding MGP_LPJ_T0032444.1 MGP_LPJ_G0019095.1 mouse_genomes_project 11 104705245 104708245 + Psme3 protein_coding processed_transcript MGP_LPJ_T0032445.1 MGP_LPJ_G0019095.1 mouse_genomes_project 11 104708054 104710392 + Psme3 protein_coding processed_transcript MGP_LPJ_T0030401.1 MGP_LPJ_G0018547.1 mouse_genomes_project 11 73631105 73638632 - Spns3 protein_coding processed_transcript MGP_LPJ_T0030402.1 MGP_LPJ_G0018547.1 mouse_genomes_project 11 73634333 73692008 - MGP_LPJ_P0030402 Spns3 protein_coding protein_coding MGP_LPJ_T0030403.1 MGP_LPJ_G0018547.1 mouse_genomes_project 11 73634338 73691803 - MGP_LPJ_P0030403 Spns3 protein_coding protein_coding MGP_LPJ_T0028739.1 MGP_LPJ_G0018149.1 mouse_genomes_project 11 49629183 49672055 + MGP_LPJ_P0028739 Tbc1d9b protein_coding protein_coding MGP_LPJ_T0028740.1 MGP_LPJ_G0018149.1 mouse_genomes_project 11 49629183 49672810 + MGP_LPJ_P0028740 Tbc1d9b protein_coding protein_coding MGP_LPJ_T0028741.1 MGP_LPJ_G0018149.1 mouse_genomes_project 11 49629189 49638213 + Tbc1d9b protein_coding processed_transcript MGP_LPJ_T0028742.1 MGP_LPJ_G0018149.1 mouse_genomes_project 11 49633185 49638323 + Tbc1d9b protein_coding processed_transcript MGP_LPJ_T0028743.1 MGP_LPJ_G0018149.1 mouse_genomes_project 11 49642791 49650752 + Tbc1d9b protein_coding processed_transcript MGP_LPJ_T0028744.1 MGP_LPJ_G0018149.1 mouse_genomes_project 11 49644180 49651987 + Tbc1d9b protein_coding processed_transcript MGP_LPJ_T0028745.1 MGP_LPJ_G0018149.1 mouse_genomes_project 11 49648677 49650511 + Tbc1d9b protein_coding processed_transcript MGP_LPJ_T0028746.1 MGP_LPJ_G0018149.1 mouse_genomes_project 11 49662208 49664641 + Tbc1d9b protein_coding processed_transcript MGP_LPJ_T0029633.1 MGP_LPJ_G0018382.1 mouse_genomes_project 11 65729571 65892182 - MGP_LPJ_P0029633 Arhgap44 protein_coding protein_coding MGP_LPJ_T0029634.1 MGP_LPJ_G0018382.1 mouse_genomes_project 11 65729574 65892192 - MGP_LPJ_P0029634 Arhgap44 protein_coding protein_coding MGP_LPJ_T0029635.1 MGP_LPJ_G0018382.1 mouse_genomes_project 11 65729575 65892135 - MGP_LPJ_P0029635 Arhgap44 protein_coding protein_coding MGP_LPJ_T0029636.1 MGP_LPJ_G0018382.1 mouse_genomes_project 11 65778969 65891802 - MGP_LPJ_P0029636 Arhgap44 protein_coding protein_coding MGP_LPJ_T0030955.1 MGP_LPJ_G0018687.1 mouse_genomes_project 11 80040426 80045539 - MGP_LPJ_P0030955 Tmem199 protein_coding protein_coding MGP_LPJ_T0030956.1 MGP_LPJ_G0018687.1 mouse_genomes_project 11 80040623 80042190 - Tmem199 protein_coding retained_intron MGP_LPJ_T0030957.1 MGP_LPJ_G0018687.1 mouse_genomes_project 11 80041879 80045412 - Tmem199 protein_coding retained_intron MGP_LPJ_T0030958.1 MGP_LPJ_G0018687.1 mouse_genomes_project 11 80042880 80045450 - Tmem199 protein_coding retained_intron MGP_LPJ_T0028636.1 MGP_LPJ_G0018113.1 mouse_genomes_project 11 48077543 48089987 - MGP_LPJ_P0028636 Trim41 protein_coding protein_coding MGP_LPJ_T0028637.1 MGP_LPJ_G0018113.1 mouse_genomes_project 11 48079525 48083535 - MGP_LPJ_P0028637 Trim41 protein_coding protein_coding MGP_LPJ_T0028638.1 MGP_LPJ_G0018113.1 mouse_genomes_project 11 48080236 48089587 - MGP_LPJ_P0028638 Trim41 protein_coding protein_coding MGP_LPJ_T0028639.1 MGP_LPJ_G0018113.1 mouse_genomes_project 11 48080338 48088755 - MGP_LPJ_P0028639 Trim41 protein_coding protein_coding MGP_LPJ_T0028561.1 MGP_LPJ_G0018091.1 mouse_genomes_project 11 43605255 43654685 + MGP_LPJ_P0028561 Rnf145 protein_coding protein_coding MGP_LPJ_T0028562.1 MGP_LPJ_G0018091.1 mouse_genomes_project 11 43605274 43610662 + Rnf145 protein_coding processed_transcript MGP_LPJ_T0028563.1 MGP_LPJ_G0018091.1 mouse_genomes_project 11 43605752 43644366 + MGP_LPJ_P0028563 Rnf145 protein_coding protein_coding MGP_LPJ_T0028564.1 MGP_LPJ_G0018091.1 mouse_genomes_project 11 43606615 43638317 + Rnf145 protein_coding processed_transcript MGP_LPJ_T0028565.1 MGP_LPJ_G0018091.1 mouse_genomes_project 11 43645993 43649206 + Rnf145 protein_coding processed_transcript MGP_LPJ_T0028566.1 MGP_LPJ_G0018091.1 mouse_genomes_project 11 43649187 43651150 + Rnf145 protein_coding processed_transcript MGP_LPJ_T0027657.1 MGP_LPJ_G0017874.1 mouse_genomes_project 11 876019 886356 - MGP_LPJ_P0027657 4921536K21Rik protein_coding protein_coding MGP_LPJ_T0032944.1 MGP_LPJ_G0019199.1 mouse_genomes_project 11 109925249 109944287 - MGP_LPJ_P0032944 Ccdc47 protein_coding protein_coding MGP_LPJ_T0032945.1 MGP_LPJ_G0019199.1 mouse_genomes_project 11 109928620 109932272 - MGP_LPJ_P0032945 Ccdc47 protein_coding protein_coding MGP_LPJ_T0032946.1 MGP_LPJ_G0019199.1 mouse_genomes_project 11 109929459 109933279 - MGP_LPJ_P0032946 Ccdc47 protein_coding protein_coding MGP_LPJ_T0032947.1 MGP_LPJ_G0019199.1 mouse_genomes_project 11 109929848 109930749 - MGP_LPJ_P0032947 Ccdc47 protein_coding protein_coding MGP_LPJ_T0032948.1 MGP_LPJ_G0019199.1 mouse_genomes_project 11 109932136 109933386 - Ccdc47 protein_coding processed_transcript MGP_LPJ_T0011815.1 MGP_LPJ_G0009930.1 mouse_genomes_project 11 75435331 75436303 + MGP_LPJ_P0011815 Olfr404-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_LPJ_T0028084.1 MGP_LPJ_G0017977.1 mouse_genomes_project 11 18251087 18366882 + MGP_LPJ_P0028084 Sertad2 protein_coding protein_coding MGP_LPJ_T0028085.1 MGP_LPJ_G0017977.1 mouse_genomes_project 11 18345853 18366882 + MGP_LPJ_P0028085 Sertad2 protein_coding protein_coding MGP_LPJ_T0028086.1 MGP_LPJ_G0017977.1 mouse_genomes_project 11 18361015 18362926 + MGP_LPJ_P0028086 Sertad2 protein_coding protein_coding MGP_LPJ_T0031557.1 MGP_LPJ_G0018846.1 mouse_genomes_project 11 94020527 94022771 - MGP_LPJ_P0031557 Kif2b protein_coding protein_coding MGP_LPJ_T0012458.1 MGP_LPJ_G0010549.1 mouse_genomes_project 11 2772817 2773261 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017191.1 MGP_LPJ_G0015117.1 mouse_genomes_project 11 101005807 101009618 + Gm11629 processed_transcript processed_transcript MGP_LPJ_T0032694.1 MGP_LPJ_G0019140.1 mouse_genomes_project 11 106094265 106097321 - MGP_LPJ_P0032694 Gm11627 protein_coding protein_coding MGP_LPJ_T0032695.1 MGP_LPJ_G0019140.1 mouse_genomes_project 11 106094311 106097135 - Gm11627 protein_coding processed_transcript MGP_LPJ_T0032696.1 MGP_LPJ_G0019140.1 mouse_genomes_project 11 106094358 106096978 - MGP_LPJ_P0032696 Gm11627 protein_coding protein_coding MGP_LPJ_T0012592.1 MGP_LPJ_G0010683.1 mouse_genomes_project 11 52142039 52142202 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011308.1 MGP_LPJ_G0009426.1 mouse_genomes_project 11 621804 622040 - Gm27517 misc_RNA misc_RNA MGP_LPJ_T0098944.1 MGP_LPJ_G0037207.1 mouse_genomes_project 11 101945164 101945268 - Gm23640 snRNA snRNA MGP_LPJ_T0012522.1 MGP_LPJ_G0010613.1 mouse_genomes_project 11 22471834 22473359 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012563.1 MGP_LPJ_G0010654.1 mouse_genomes_project 11 39393081 39393547 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098906.1 MGP_LPJ_G0037169.1 mouse_genomes_project 11 57879890 57879993 + Gm24582 snRNA snRNA MGP_LPJ_T0098884.1 MGP_LPJ_G0037147.1 mouse_genomes_project 11 5160451 5160513 - Gm27393 snRNA snRNA MGP_LPJ_T0012594.1 MGP_LPJ_G0010685.1 mouse_genomes_project 11 53004955 53005292 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017118.1 MGP_LPJ_G0015077.1 mouse_genomes_project 11 28566712 28581756 + Gm8098 processed_transcript processed_transcript MGP_LPJ_T0003370.1 MGP_LPJ_G0003106.1 mouse_genomes_project 11 122481898 122502861 + Gm11725 antisense antisense MGP_LPJ_T0027581.1 MGP_LPJ_G0017863.1 mouse_genomes_project 11 201181 217909 - MGP_LPJ_P0027581 Drg1 protein_coding protein_coding MGP_LPJ_T0027582.1 MGP_LPJ_G0017863.1 mouse_genomes_project 11 201371 204658 - Drg1 protein_coding retained_intron MGP_LPJ_T0027583.1 MGP_LPJ_G0017863.1 mouse_genomes_project 11 206209 214036 - Drg1 protein_coding retained_intron MGP_LPJ_T0027584.1 MGP_LPJ_G0017863.1 mouse_genomes_project 11 208156 217908 - Drg1 protein_coding processed_transcript MGP_LPJ_T0027585.1 MGP_LPJ_G0017863.1 mouse_genomes_project 11 209345 217931 - Drg1 protein_coding retained_intron MGP_LPJ_T0027586.1 MGP_LPJ_G0017863.1 mouse_genomes_project 11 210942 217909 - MGP_LPJ_P0027586 Drg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0009706.1 MGP_LPJ_G0007824.1 mouse_genomes_project 11 67934851 67934923 + Mir6923 miRNA miRNA MGP_LPJ_T0031158.1 MGP_LPJ_G0018743.1 mouse_genomes_project 11 84928127 84933949 + MGP_LPJ_P0031158 Slfn1 protein_coding protein_coding MGP_LPJ_T0030432.1 MGP_LPJ_G0018553.1 mouse_genomes_project 11 74160542 74176668 + MGP_LPJ_P0030432 P2rx1 protein_coding protein_coding MGP_LPJ_T0030433.1 MGP_LPJ_G0018553.1 mouse_genomes_project 11 74160754 74175594 + MGP_LPJ_P0030433 P2rx1 protein_coding protein_coding MGP_LPJ_T0030434.1 MGP_LPJ_G0018553.1 mouse_genomes_project 11 74171258 74176665 + P2rx1 protein_coding retained_intron MGP_LPJ_T0033551.1 MGP_LPJ_G0019322.1 mouse_genomes_project 11 120697659 120716848 - MGP_LPJ_P0033551 Evpl protein_coding protein_coding MGP_LPJ_T0003185.1 MGP_LPJ_G0002957.1 mouse_genomes_project 11 54165920 54172879 + Gm12223 antisense antisense MGP_LPJ_T0006234.1 MGP_LPJ_G0005205.1 mouse_genomes_project 11 31422240 31446892 - Gm12111 lincRNA lincRNA MGP_LPJ_T0033222.1 MGP_LPJ_G0019259.1 mouse_genomes_project 11 119003066 119007096 + MGP_LPJ_P0033222 Rpl38 protein_coding protein_coding MGP_LPJ_T0033223.1 MGP_LPJ_G0019259.1 mouse_genomes_project 11 119003090 119007096 + MGP_LPJ_P0033223 Rpl38 protein_coding protein_coding MGP_LPJ_T0033224.1 MGP_LPJ_G0019259.1 mouse_genomes_project 11 119003151 119007096 + MGP_LPJ_P0033224 Rpl38 protein_coding protein_coding MGP_LPJ_T0033225.1 MGP_LPJ_G0019259.1 mouse_genomes_project 11 119003168 119007096 + MGP_LPJ_P0033225 Rpl38 protein_coding protein_coding MGP_LPJ_T0029621.1 MGP_LPJ_G0018377.1 mouse_genomes_project 11 64551340 64588999 - MGP_LPJ_P0029621 Hs3st3b1 protein_coding protein_coding MGP_LPJ_T0028421.1 MGP_LPJ_G0018053.1 mouse_genomes_project 11 31762395 32080385 - MGP_LPJ_P0028421 Ranbp17 protein_coding protein_coding MGP_LPJ_T0028422.1 MGP_LPJ_G0018053.1 mouse_genomes_project 11 31764002 31896537 - MGP_LPJ_P0028422 Ranbp17 protein_coding unknown_likely_coding MGP_LPJ_T0028425.1 MGP_LPJ_G0018053.1 mouse_genomes_project 11 31851037 32080281 - MGP_LPJ_P0028425 Ranbp17 protein_coding nonsense_mediated_decay MGP_LPJ_T0028426.1 MGP_LPJ_G0018053.1 mouse_genomes_project 11 31857441 31886966 - Ranbp17 protein_coding processed_transcript MGP_LPJ_T0028427.1 MGP_LPJ_G0018053.1 mouse_genomes_project 11 32037743 32080269 - MGP_LPJ_P0028427 Ranbp17 protein_coding protein_coding MGP_LPJ_T0028428.1 MGP_LPJ_G0018053.1 mouse_genomes_project 11 32051627 32079733 - MGP_LPJ_P0028428 Ranbp17 protein_coding protein_coding MGP_LPJ_T0033346.1 MGP_LPJ_G0019290.1 mouse_genomes_project 11 119870365 119884440 + MGP_LPJ_P0033346 Slc16a5 protein_coding protein_coding MGP_LPJ_T0033347.1 MGP_LPJ_G0019290.1 mouse_genomes_project 11 119870397 119878392 + MGP_LPJ_P0033347 Slc16a5 protein_coding protein_coding MGP_LPJ_T0033348.1 MGP_LPJ_G0019290.1 mouse_genomes_project 11 119870455 119878497 + Slc16a5 protein_coding processed_transcript MGP_LPJ_T0033349.1 MGP_LPJ_G0019290.1 mouse_genomes_project 11 119870500 119882963 + MGP_LPJ_P0033349 Slc16a5 protein_coding protein_coding MGP_LPJ_T0033350.1 MGP_LPJ_G0019290.1 mouse_genomes_project 11 119871691 119884440 + Slc16a5 protein_coding processed_transcript MGP_LPJ_T0033351.1 MGP_LPJ_G0019290.1 mouse_genomes_project 11 119871706 119872908 + Slc16a5 protein_coding processed_transcript MGP_LPJ_T0033352.1 MGP_LPJ_G0019290.1 mouse_genomes_project 11 119871709 119878497 + Slc16a5 protein_coding processed_transcript MGP_LPJ_T0033353.1 MGP_LPJ_G0019290.1 mouse_genomes_project 11 119871715 119878441 + Slc16a5 protein_coding processed_transcript MGP_LPJ_T0033354.1 MGP_LPJ_G0019290.1 mouse_genomes_project 11 119872459 119883648 + Slc16a5 protein_coding retained_intron MGP_LPJ_T0009742.1 MGP_LPJ_G0007860.1 mouse_genomes_project 11 89880532 89880647 - Mir142b miRNA miRNA MGP_LPJ_T0011816.1 MGP_LPJ_G0009931.1 mouse_genomes_project 11 75539133 75540104 + MGP_LPJ_P0011816 Olfr409-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_LPJ_T0012781.1 MGP_LPJ_G0010872.1 mouse_genomes_project 11 125811213 125811629 - processed_pseudogene processed_pseudogene MGP_LPJ_T0032188.1 MGP_LPJ_G0019022.1 mouse_genomes_project 11 103030577 103031656 - MGP_LPJ_P0032188 protein_coding protein_coding MGP_LPJ_T0029164.1 MGP_LPJ_G0018261.1 mouse_genomes_project 11 58567663 58586507 + MGP_LPJ_P0029164 Sh3bp5l protein_coding protein_coding MGP_LPJ_T0029165.1 MGP_LPJ_G0018261.1 mouse_genomes_project 11 58567689 58586504 + MGP_LPJ_P0029165 Sh3bp5l protein_coding protein_coding MGP_LPJ_T0029166.1 MGP_LPJ_G0018261.1 mouse_genomes_project 11 58567982 58568449 + Sh3bp5l protein_coding processed_transcript MGP_LPJ_T0029167.1 MGP_LPJ_G0018261.1 mouse_genomes_project 11 58568214 58586499 + Sh3bp5l protein_coding processed_transcript MGP_LPJ_T0029168.1 MGP_LPJ_G0018261.1 mouse_genomes_project 11 58584089 58585729 + Sh3bp5l protein_coding processed_transcript MGP_LPJ_T0011319.1 MGP_LPJ_G0009437.1 mouse_genomes_project 11 68217029 68217342 + Gm26476 misc_RNA misc_RNA MGP_LPJ_T0032971.1 MGP_LPJ_G0019205.1 mouse_genomes_project 11 110032797 110034392 - MGP_LPJ_P0032971 Gh protein_coding protein_coding MGP_LPJ_T0012477.1 MGP_LPJ_G0010568.1 mouse_genomes_project 11 9543103 9546012 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006370.1 MGP_LPJ_G0005311.1 mouse_genomes_project 11 116251283 116275991 + Gm11680 lincRNA lincRNA MGP_LPJ_T0032879.1 MGP_LPJ_G0019183.1 mouse_genomes_project 11 108803030 108818494 + MGP_LPJ_P0032879 Mettl2 protein_coding protein_coding MGP_LPJ_T0032880.1 MGP_LPJ_G0019183.1 mouse_genomes_project 11 108803084 108818494 + Mettl2 protein_coding processed_transcript MGP_LPJ_T0032881.1 MGP_LPJ_G0019183.1 mouse_genomes_project 11 108809044 108817085 + Mettl2 protein_coding processed_transcript MGP_LPJ_T0032882.1 MGP_LPJ_G0019183.1 mouse_genomes_project 11 108809055 108812252 + Mettl2 protein_coding processed_transcript MGP_LPJ_T0032883.1 MGP_LPJ_G0019183.1 mouse_genomes_project 11 108814158 108818494 + Mettl2 protein_coding processed_transcript MGP_LPJ_T0098923.1 MGP_LPJ_G0037186.1 mouse_genomes_project 11 81263165 81263268 - Gm25867 snRNA snRNA MGP_LPJ_T0028273.1 MGP_LPJ_G0018017.1 mouse_genomes_project 11 27776246 27779521 - MGP_LPJ_P0028273 Prorsd1 protein_coding protein_coding MGP_LPJ_T0028274.1 MGP_LPJ_G0018017.1 mouse_genomes_project 11 27777365 27779523 - MGP_LPJ_P0028274 Prorsd1 protein_coding protein_coding MGP_LPJ_T0006257.1 MGP_LPJ_G0005227.1 mouse_genomes_project 11 50818231 50865380 - lincRNA lincRNA MGP_LPJ_T0006258.1 MGP_LPJ_G0005227.1 mouse_genomes_project 11 50818649 50864488 - lincRNA lincRNA MGP_LPJ_T0098125.1 MGP_LPJ_G0036406.1 mouse_genomes_project 11 92511605 92511724 - n-R5s72 rRNA rRNA MGP_LPJ_T0027954.1 MGP_LPJ_G0017944.1 mouse_genomes_project 11 4460164 4467976 - MGP_LPJ_P0027954 Igfbp3 protein_coding protein_coding MGP_LPJ_T0027955.1 MGP_LPJ_G0017944.1 mouse_genomes_project 11 4461764 4468002 - MGP_LPJ_P0027955 Igfbp3 protein_coding protein_coding MGP_LPJ_T0012631.1 MGP_LPJ_G0010722.1 mouse_genomes_project 11 61954414 61954816 - processed_pseudogene processed_pseudogene MGP_LPJ_T0029615.1 MGP_LPJ_G0018375.1 mouse_genomes_project 11 63691900 63728021 + MGP_LPJ_P0029615 Tekt3 protein_coding protein_coding MGP_LPJ_T0029238.1 MGP_LPJ_G0018299.1 mouse_genomes_project 11 59596120 59604019 - MGP_LPJ_P0029238 Guk1 protein_coding protein_coding MGP_LPJ_T0029239.1 MGP_LPJ_G0018299.1 mouse_genomes_project 11 59596292 59599964 - MGP_LPJ_P0029239 Guk1 protein_coding protein_coding MGP_LPJ_T0029240.1 MGP_LPJ_G0018299.1 mouse_genomes_project 11 59596355 59597695 - Guk1 protein_coding retained_intron MGP_LPJ_T0029241.1 MGP_LPJ_G0018299.1 mouse_genomes_project 11 59596401 59597094 - Guk1 protein_coding retained_intron MGP_LPJ_T0029242.1 MGP_LPJ_G0018299.1 mouse_genomes_project 11 59598421 59603879 - Guk1 protein_coding retained_intron MGP_LPJ_T0029243.1 MGP_LPJ_G0018299.1 mouse_genomes_project 11 59599014 59604287 - MGP_LPJ_P0029243 Guk1 protein_coding protein_coding MGP_LPJ_T0033642.1 MGP_LPJ_G0019341.1 mouse_genomes_project 11 121305210 121336735 - MGP_LPJ_P0033642 Mxra7 protein_coding protein_coding MGP_LPJ_T0033643.1 MGP_LPJ_G0019341.1 mouse_genomes_project 11 121309764 121336702 - MGP_LPJ_P0033643 Mxra7 protein_coding protein_coding MGP_LPJ_T0033644.1 MGP_LPJ_G0019341.1 mouse_genomes_project 11 121309956 121336692 - MGP_LPJ_P0033644 Mxra7 protein_coding nonsense_mediated_decay MGP_LPJ_T0034203.1 MGP_LPJ_G0019455.1 mouse_genomes_project 11 126446562 126509222 - MGP_LPJ_P0034203 B3gntl1 protein_coding protein_coding MGP_LPJ_T0034204.1 MGP_LPJ_G0019455.1 mouse_genomes_project 11 126457633 126509222 - MGP_LPJ_P0034204 B3gntl1 protein_coding protein_coding MGP_LPJ_T0011318.1 MGP_LPJ_G0009436.1 mouse_genomes_project 11 60568631 60568758 + Gm27511 misc_RNA misc_RNA MGP_LPJ_T0031623.1 MGP_LPJ_G0018860.1 mouse_genomes_project 11 97042773 97114525 - MGP_LPJ_P0031623 Cacna1g protein_coding protein_coding MGP_LPJ_T0031624.1 MGP_LPJ_G0018860.1 mouse_genomes_project 11 97042773 97114525 - MGP_LPJ_P0031624 Cacna1g protein_coding protein_coding MGP_LPJ_T0031625.1 MGP_LPJ_G0018860.1 mouse_genomes_project 11 97042773 97114525 - MGP_LPJ_P0031625 Cacna1g protein_coding protein_coding MGP_LPJ_T0031626.1 MGP_LPJ_G0018860.1 mouse_genomes_project 11 97042773 97114525 - MGP_LPJ_P0031626 Cacna1g protein_coding protein_coding MGP_LPJ_T0031627.1 MGP_LPJ_G0018860.1 mouse_genomes_project 11 97042773 97114525 - MGP_LPJ_P0031627 Cacna1g protein_coding protein_coding MGP_LPJ_T0031628.1 MGP_LPJ_G0018860.1 mouse_genomes_project 11 97042773 97114525 - MGP_LPJ_P0031628 Cacna1g protein_coding protein_coding MGP_LPJ_T0031629.1 MGP_LPJ_G0018860.1 mouse_genomes_project 11 97042773 97114525 - MGP_LPJ_P0031629 Cacna1g protein_coding protein_coding MGP_LPJ_T0031630.1 MGP_LPJ_G0018860.1 mouse_genomes_project 11 97042773 97114525 - MGP_LPJ_P0031630 Cacna1g protein_coding protein_coding MGP_LPJ_T0031631.1 MGP_LPJ_G0018860.1 mouse_genomes_project 11 97042773 97114525 - MGP_LPJ_P0031631 Cacna1g protein_coding protein_coding MGP_LPJ_T0031632.1 MGP_LPJ_G0018860.1 mouse_genomes_project 11 97042788 97114623 - MGP_LPJ_P0031632 Cacna1g protein_coding protein_coding MGP_LPJ_T0031633.1 MGP_LPJ_G0018860.1 mouse_genomes_project 11 97043017 97114525 - MGP_LPJ_P0031633 Cacna1g protein_coding protein_coding MGP_LPJ_T0031634.1 MGP_LPJ_G0018860.1 mouse_genomes_project 11 97044234 97046071 - Cacna1g protein_coding processed_transcript MGP_LPJ_T0031635.1 MGP_LPJ_G0018860.1 mouse_genomes_project 11 97045872 97051581 - Cacna1g protein_coding processed_transcript MGP_LPJ_T0031636.1 MGP_LPJ_G0018860.1 mouse_genomes_project 11 97053205 97059881 - Cacna1g protein_coding processed_transcript MGP_LPJ_T0031637.1 MGP_LPJ_G0018860.1 mouse_genomes_project 11 97060611 97061834 - Cacna1g protein_coding processed_transcript MGP_LPJ_T0031638.1 MGP_LPJ_G0018860.1 mouse_genomes_project 11 97062323 97114066 - Cacna1g protein_coding processed_transcript MGP_LPJ_T0012646.1 MGP_LPJ_G0010737.1 mouse_genomes_project 11 70651643 70651825 - processed_pseudogene processed_pseudogene MGP_LPJ_T0031099.1 MGP_LPJ_G0018724.1 mouse_genomes_project 11 83803927 83805796 + MGP_LPJ_P0031099 Ccl2 protein_coding protein_coding MGP_LPJ_T0031100.1 MGP_LPJ_G0018724.1 mouse_genomes_project 11 83803966 83805793 + Ccl2 protein_coding retained_intron MGP_LPJ_T0012670.1 MGP_LPJ_G0010761.1 mouse_genomes_project 11 78583046 78583350 - processed_pseudogene processed_pseudogene MGP_LPJ_T0029175.1 MGP_LPJ_G0018267.1 mouse_genomes_project 11 58741256 58744037 - MGP_LPJ_P0029175 protein_coding protein_coding MGP_LPJ_T0029176.1 MGP_LPJ_G0018267.1 mouse_genomes_project 11 58741893 58744051 - MGP_LPJ_P0029176 protein_coding protein_coding MGP_LPJ_T0030483.1 MGP_LPJ_G0018573.1 mouse_genomes_project 11 74813109 74814347 + MGP_LPJ_P0030483 Olfr384 protein_coding protein_coding MGP_LPJ_T0012748.1 MGP_LPJ_G0010839.1 mouse_genomes_project 11 108699345 108700385 - processed_pseudogene processed_pseudogene MGP_LPJ_T0032861.1 MGP_LPJ_G0019179.1 mouse_genomes_project 11 108211849 108213686 + MGP_LPJ_P0032861 protein_coding protein_coding MGP_LPJ_T0100159.1 MGP_LPJ_G0038422.1 mouse_genomes_project 11 72963600 72963731 - Gm22927 snoRNA snoRNA MGP_LPJ_T0033381.1 MGP_LPJ_G0019296.1 mouse_genomes_project 11 120009778 120031166 - MGP_LPJ_P0033381 Gga3 protein_coding protein_coding MGP_LPJ_T0033382.1 MGP_LPJ_G0019296.1 mouse_genomes_project 11 120009778 120031166 - MGP_LPJ_P0033382 Gga3 protein_coding protein_coding MGP_LPJ_T0033383.1 MGP_LPJ_G0019296.1 mouse_genomes_project 11 120009778 120031166 - MGP_LPJ_P0033383 Gga3 protein_coding nonsense_mediated_decay MGP_LPJ_T0033384.1 MGP_LPJ_G0019296.1 mouse_genomes_project 11 120009887 120015618 - Gga3 protein_coding processed_transcript MGP_LPJ_T0033385.1 MGP_LPJ_G0019296.1 mouse_genomes_project 11 120011227 120014579 - Gga3 protein_coding processed_transcript MGP_LPJ_T0033386.1 MGP_LPJ_G0019296.1 mouse_genomes_project 11 120011310 120030999 - Gga3 protein_coding processed_transcript MGP_LPJ_T0033387.1 MGP_LPJ_G0019296.1 mouse_genomes_project 11 120013108 120013551 - Gga3 protein_coding processed_transcript MGP_LPJ_T0033388.1 MGP_LPJ_G0019296.1 mouse_genomes_project 11 120013459 120030991 - Gga3 protein_coding processed_transcript MGP_LPJ_T0033389.1 MGP_LPJ_G0019296.1 mouse_genomes_project 11 120014000 120031003 - Gga3 protein_coding processed_transcript MGP_LPJ_T0033390.1 MGP_LPJ_G0019296.1 mouse_genomes_project 11 120017738 120031008 - MGP_LPJ_P0033390 Gga3 protein_coding protein_coding MGP_LPJ_T0033391.1 MGP_LPJ_G0019296.1 mouse_genomes_project 11 120018595 120030839 - Gga3 protein_coding processed_transcript MGP_LPJ_T0033392.1 MGP_LPJ_G0019296.1 mouse_genomes_project 11 120018613 120030995 - Gga3 protein_coding processed_transcript MGP_LPJ_T0029418.1 MGP_LPJ_G0018340.1 mouse_genomes_project 11 61529102 61583201 + MGP_LPJ_P0029418 Kcnj12 protein_coding protein_coding MGP_LPJ_T0029419.1 MGP_LPJ_G0018340.1 mouse_genomes_project 11 61577873 61583201 + MGP_LPJ_P0029419 Kcnj12 protein_coding protein_coding MGP_LPJ_T0029420.1 MGP_LPJ_G0018340.1 mouse_genomes_project 11 61577873 61583197 + MGP_LPJ_P0029420 Kcnj12 protein_coding protein_coding MGP_LPJ_T0028539.1 MGP_LPJ_G0018083.1 mouse_genomes_project 11 42542651 42607609 + MGP_LPJ_P0028539 Ccnjl protein_coding protein_coding MGP_LPJ_T0028540.1 MGP_LPJ_G0018083.1 mouse_genomes_project 11 42543113 42573729 + Ccnjl protein_coding processed_transcript MGP_LPJ_T0009754.1 MGP_LPJ_G0007872.1 mouse_genomes_project 11 100711880 100712019 + Mir8102 miRNA miRNA MGP_LPJ_T0032355.1 MGP_LPJ_G0019077.1 mouse_genomes_project 11 104429578 104437263 + MGP_LPJ_P0032355 Naglu protein_coding protein_coding MGP_LPJ_T0032356.1 MGP_LPJ_G0019077.1 mouse_genomes_project 11 104431118 104436162 + Naglu protein_coding processed_transcript MGP_LPJ_T0032357.1 MGP_LPJ_G0019077.1 mouse_genomes_project 11 104431553 104436397 + Naglu protein_coding processed_transcript MGP_LPJ_T0006385.1 MGP_LPJ_G0005321.1 mouse_genomes_project 11 120448569 120454090 - B230344G16Rik lincRNA lincRNA MGP_LPJ_T0030053.1 MGP_LPJ_G0018478.1 mouse_genomes_project 11 71042854 71055341 - MGP_LPJ_P0030053 Elp5 protein_coding nonsense_mediated_decay MGP_LPJ_T0030054.1 MGP_LPJ_G0018478.1 mouse_genomes_project 11 71042856 71056306 - MGP_LPJ_P0030054 Elp5 protein_coding protein_coding MGP_LPJ_T0030055.1 MGP_LPJ_G0018478.1 mouse_genomes_project 11 71042860 71055332 - Elp5 protein_coding retained_intron MGP_LPJ_T0030056.1 MGP_LPJ_G0018478.1 mouse_genomes_project 11 71042864 71044036 - Elp5 protein_coding retained_intron MGP_LPJ_T0030057.1 MGP_LPJ_G0018478.1 mouse_genomes_project 11 71043873 71055130 - MGP_LPJ_P0030057 Elp5 protein_coding nonsense_mediated_decay MGP_LPJ_T0030058.1 MGP_LPJ_G0018478.1 mouse_genomes_project 11 71044147 71055330 - Elp5 protein_coding retained_intron MGP_LPJ_T0030059.1 MGP_LPJ_G0018478.1 mouse_genomes_project 11 71045344 71055280 - Elp5 protein_coding retained_intron MGP_LPJ_T0030060.1 MGP_LPJ_G0018478.1 mouse_genomes_project 11 71045362 71056693 - MGP_LPJ_P0030060 Elp5 protein_coding protein_coding MGP_LPJ_T0030061.1 MGP_LPJ_G0018478.1 mouse_genomes_project 11 71050135 71057571 - MGP_LPJ_P0030061 Elp5 protein_coding protein_coding MGP_LPJ_T0030062.1 MGP_LPJ_G0018478.1 mouse_genomes_project 11 71055103 71055765 - MGP_LPJ_P0030062 Elp5 protein_coding protein_coding MGP_LPJ_T0033809.1 MGP_LPJ_G0019375.1 mouse_genomes_project 11 123706906 123711588 - MGP_LPJ_P0033809 Cbx8 protein_coding protein_coding MGP_LPJ_T0033810.1 MGP_LPJ_G0019375.1 mouse_genomes_project 11 123709671 123711450 - Cbx8 protein_coding processed_transcript MGP_LPJ_T0033811.1 MGP_LPJ_G0019375.1 mouse_genomes_project 11 123709802 123711530 - Cbx8 protein_coding processed_transcript MGP_LPJ_T0011817.1 MGP_LPJ_G0009932.1 mouse_genomes_project 11 120693103 120696881 + MGP_LPJ_P0011817 Cdk3-ps polymorphic_pseudogene polymorphic_pseudogene MGP_LPJ_T0011818.1 MGP_LPJ_G0009932.1 mouse_genomes_project 11 120693586 120694285 + Cdk3-ps polymorphic_pseudogene processed_transcript MGP_LPJ_T0011819.1 MGP_LPJ_G0009932.1 mouse_genomes_project 11 120693640 120697390 + Cdk3-ps polymorphic_pseudogene processed_transcript MGP_LPJ_T0101764.1 MGP_LPJ_G0039802.1 mouse_genomes_project 11 58267427 58276151 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0030565.1 MGP_LPJ_G0018605.1 mouse_genomes_project 11 76214783 76234203 - MGP_LPJ_P0030565 Srr protein_coding protein_coding MGP_LPJ_T0030566.1 MGP_LPJ_G0018605.1 mouse_genomes_project 11 76214933 76234080 - Srr protein_coding processed_transcript MGP_LPJ_T0030567.1 MGP_LPJ_G0018605.1 mouse_genomes_project 11 76215217 76234178 - MGP_LPJ_P0030567 Srr protein_coding protein_coding MGP_LPJ_T0030568.1 MGP_LPJ_G0018605.1 mouse_genomes_project 11 76215223 76234353 - MGP_LPJ_P0030568 Srr protein_coding protein_coding MGP_LPJ_T0030569.1 MGP_LPJ_G0018605.1 mouse_genomes_project 11 76215243 76234178 - MGP_LPJ_P0030569 Srr protein_coding protein_coding MGP_LPJ_T0030570.1 MGP_LPJ_G0018605.1 mouse_genomes_project 11 76218165 76234087 - MGP_LPJ_P0030570 Srr protein_coding protein_coding MGP_LPJ_T0030571.1 MGP_LPJ_G0018605.1 mouse_genomes_project 11 76218646 76234065 - MGP_LPJ_P0030571 Srr protein_coding protein_coding MGP_LPJ_T0030572.1 MGP_LPJ_G0018605.1 mouse_genomes_project 11 76218791 76234108 - Srr protein_coding retained_intron MGP_LPJ_T0030573.1 MGP_LPJ_G0018605.1 mouse_genomes_project 11 76218876 76234080 - Srr protein_coding retained_intron MGP_LPJ_T0030574.1 MGP_LPJ_G0018605.1 mouse_genomes_project 11 76219534 76234063 - MGP_LPJ_P0030574 Srr protein_coding protein_coding MGP_LPJ_T0028039.1 MGP_LPJ_G0017962.1 mouse_genomes_project 11 14301038 14438964 + MGP_LPJ_P0028039 Egfr protein_coding protein_coding MGP_LPJ_T0028040.1 MGP_LPJ_G0017962.1 mouse_genomes_project 11 14301046 14469186 + MGP_LPJ_P0028040 Egfr protein_coding protein_coding MGP_LPJ_T0028041.1 MGP_LPJ_G0017962.1 mouse_genomes_project 11 14301065 14343254 + Egfr protein_coding processed_transcript MGP_LPJ_T0028042.1 MGP_LPJ_G0017962.1 mouse_genomes_project 11 14429830 14435398 + MGP_LPJ_P0028042 Egfr protein_coding protein_coding MGP_LPJ_T0028043.1 MGP_LPJ_G0017962.1 mouse_genomes_project 11 14456245 14461868 + Egfr protein_coding processed_transcript MGP_LPJ_T0100181.1 MGP_LPJ_G0038444.1 mouse_genomes_project 11 107862123 107862256 - Gm22743 snoRNA snoRNA MGP_LPJ_T0030407.1 MGP_LPJ_G0018549.1 mouse_genomes_project 11 73842980 73877834 + Ankfy1 protein_coding retained_intron MGP_LPJ_T0030408.1 MGP_LPJ_G0018549.1 mouse_genomes_project 11 73842980 73924725 + MGP_LPJ_P0030408 Ankfy1 protein_coding protein_coding MGP_LPJ_T0030409.1 MGP_LPJ_G0018549.1 mouse_genomes_project 11 73842980 73921958 + MGP_LPJ_P0030409 Ankfy1 protein_coding nonsense_mediated_decay MGP_LPJ_T0030410.1 MGP_LPJ_G0018549.1 mouse_genomes_project 11 73865036 73918325 + Ankfy1 protein_coding processed_transcript MGP_LPJ_T0030411.1 MGP_LPJ_G0018549.1 mouse_genomes_project 11 73912568 73913544 + Ankfy1 protein_coding retained_intron MGP_LPJ_T0030412.1 MGP_LPJ_G0018549.1 mouse_genomes_project 11 73917127 73918490 + Ankfy1 protein_coding retained_intron MGP_LPJ_T0003378.1 MGP_LPJ_G0003114.1 mouse_genomes_project 11 125299926 125303608 - Gm11789 antisense antisense MGP_LPJ_T0003379.1 MGP_LPJ_G0003114.1 mouse_genomes_project 11 125299952 125304542 - Gm11789 antisense antisense MGP_LPJ_T0003380.1 MGP_LPJ_G0003114.1 mouse_genomes_project 11 125299978 125304838 - Gm11789 antisense antisense MGP_LPJ_T0003381.1 MGP_LPJ_G0003114.1 mouse_genomes_project 11 125301317 125304567 - Gm11789 antisense antisense MGP_LPJ_T0003382.1 MGP_LPJ_G0003114.1 mouse_genomes_project 11 125303262 125304551 - Gm11789 antisense antisense MGP_LPJ_T0012626.1 MGP_LPJ_G0010717.1 mouse_genomes_project 11 61185540 61185921 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100153.1 MGP_LPJ_G0038416.1 mouse_genomes_project 11 63391636 63391777 + Gm24151 snoRNA snoRNA MGP_LPJ_T0030518.1 MGP_LPJ_G0018592.1 mouse_genomes_project 11 75486485 75507173 + MGP_LPJ_P0030518 Olfr59 protein_coding protein_coding MGP_LPJ_T0030519.1 MGP_LPJ_G0018592.1 mouse_genomes_project 11 75486543 75507009 + MGP_LPJ_P0030519 Olfr59 protein_coding protein_coding MGP_LPJ_T0030520.1 MGP_LPJ_G0018592.1 mouse_genomes_project 11 75486558 75507459 + MGP_LPJ_P0030520 Olfr59 protein_coding protein_coding MGP_LPJ_T0030521.1 MGP_LPJ_G0018592.1 mouse_genomes_project 11 75486582 75507008 + MGP_LPJ_P0030521 Olfr59 protein_coding protein_coding MGP_LPJ_T0028232.1 MGP_LPJ_G0018008.1 mouse_genomes_project 11 24449702 24566924 - MGP_LPJ_P0028232 Vrk2 protein_coding protein_coding MGP_LPJ_T0028233.1 MGP_LPJ_G0018008.1 mouse_genomes_project 11 24449784 24569198 - MGP_LPJ_P0028233 Vrk2 protein_coding protein_coding MGP_LPJ_T0028234.1 MGP_LPJ_G0018008.1 mouse_genomes_project 11 24513692 24568917 - Vrk2 protein_coding retained_intron MGP_LPJ_T0028235.1 MGP_LPJ_G0018008.1 mouse_genomes_project 11 24514108 24529160 - Vrk2 protein_coding processed_transcript MGP_LPJ_T0028236.1 MGP_LPJ_G0018008.1 mouse_genomes_project 11 24525190 24569201 - Vrk2 protein_coding retained_intron MGP_LPJ_T0028237.1 MGP_LPJ_G0018008.1 mouse_genomes_project 11 24527643 24569277 - MGP_LPJ_P0028237 Vrk2 protein_coding protein_coding MGP_LPJ_T0028238.1 MGP_LPJ_G0018008.1 mouse_genomes_project 11 24558421 24568898 - Vrk2 protein_coding processed_transcript MGP_LPJ_T0098895.1 MGP_LPJ_G0037158.1 mouse_genomes_project 11 27587934 27588060 + Gm23109 snRNA snRNA MGP_LPJ_T0029088.1 MGP_LPJ_G0018236.1 mouse_genomes_project 11 55091369 55118454 - MGP_LPJ_P0029088 Slc36a3 protein_coding protein_coding MGP_LPJ_T0029089.1 MGP_LPJ_G0018236.1 mouse_genomes_project 11 55091379 55118432 - MGP_LPJ_P0029089 Slc36a3 protein_coding nonsense_mediated_decay MGP_LPJ_T0029090.1 MGP_LPJ_G0018236.1 mouse_genomes_project 11 55116236 55118454 - MGP_LPJ_P0029090 Slc36a3 protein_coding protein_coding MGP_LPJ_T0032688.1 MGP_LPJ_G0019139.1 mouse_genomes_project 11 105979645 106070770 - MGP_LPJ_P0032688 Gpatch8 protein_coding protein_coding MGP_LPJ_T0032689.1 MGP_LPJ_G0019139.1 mouse_genomes_project 11 105980936 106012464 - Gpatch8 protein_coding processed_transcript MGP_LPJ_T0032690.1 MGP_LPJ_G0019139.1 mouse_genomes_project 11 106011510 106070770 - Gpatch8 protein_coding processed_transcript MGP_LPJ_T0032691.1 MGP_LPJ_G0019139.1 mouse_genomes_project 11 106012189 106070770 - Gpatch8 protein_coding processed_transcript MGP_LPJ_T0032692.1 MGP_LPJ_G0019139.1 mouse_genomes_project 11 106049823 106070747 - Gpatch8 protein_coding processed_transcript MGP_LPJ_T0032693.1 MGP_LPJ_G0019139.1 mouse_genomes_project 11 106050713 106070963 - Gpatch8 protein_coding processed_transcript MGP_LPJ_T0101778.1 MGP_LPJ_G0039816.1 mouse_genomes_project 11 85086168 85138404 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0011310.1 MGP_LPJ_G0009428.1 mouse_genomes_project 11 623697 623844 - Gm27640 misc_RNA misc_RNA MGP_LPJ_T0012565.1 MGP_LPJ_G0010656.1 mouse_genomes_project 11 39519544 39519890 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003193.1 MGP_LPJ_G0002963.1 mouse_genomes_project 11 55511677 55525427 + Gm12236 antisense antisense MGP_LPJ_T0012679.1 MGP_LPJ_G0010770.1 mouse_genomes_project 11 80267947 80268971 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100121.1 MGP_LPJ_G0038384.1 mouse_genomes_project 11 3755257 3755346 - Gm24000 snoRNA snoRNA MGP_LPJ_T0012724.1 MGP_LPJ_G0010815.1 mouse_genomes_project 11 100029591 100029711 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017169.1 MGP_LPJ_G0015105.1 mouse_genomes_project 11 86805214 86806905 + 4930502E09Rik processed_transcript processed_transcript MGP_LPJ_T0100187.1 MGP_LPJ_G0038450.1 mouse_genomes_project 11 121204324 121204399 + Snord1b snoRNA snoRNA MGP_LPJ_T0012561.1 MGP_LPJ_G0010652.1 mouse_genomes_project 11 39306752 39307414 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100123.1 MGP_LPJ_G0038386.1 mouse_genomes_project 11 3831038 3831174 - Snora5c snoRNA snoRNA MGP_LPJ_T0012572.1 MGP_LPJ_G0010663.1 mouse_genomes_project 11 43467583 43467743 - processed_pseudogene processed_pseudogene MGP_LPJ_T0032738.1 MGP_LPJ_G0019149.1 mouse_genomes_project 11 106432711 106434276 + MGP_LPJ_P0032738 Fam187a protein_coding protein_coding MGP_LPJ_T0029599.1 MGP_LPJ_G0018371.1 mouse_genomes_project 11 63435547 63459545 + MGP_LPJ_P0029599 Trim16 protein_coding protein_coding MGP_LPJ_T0029600.1 MGP_LPJ_G0018371.1 mouse_genomes_project 11 63435569 63469409 + MGP_LPJ_P0029600 Trim16 protein_coding protein_coding MGP_LPJ_T0029601.1 MGP_LPJ_G0018371.1 mouse_genomes_project 11 63435756 63436565 + Trim16 protein_coding processed_transcript MGP_LPJ_T0029602.1 MGP_LPJ_G0018371.1 mouse_genomes_project 11 63435785 63459545 + MGP_LPJ_P0029602 Trim16 protein_coding protein_coding MGP_LPJ_T0029603.1 MGP_LPJ_G0018371.1 mouse_genomes_project 11 63450353 63458018 + Trim16 protein_coding processed_transcript MGP_LPJ_T0012625.1 MGP_LPJ_G0010716.1 mouse_genomes_project 11 60935425 60936186 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006395.1 MGP_LPJ_G0005328.1 mouse_genomes_project 11 123449720 123452177 + Gm11750 lincRNA lincRNA MGP_LPJ_T0009673.1 MGP_LPJ_G0007791.1 mouse_genomes_project 11 24175048 24175157 + Mir6372 miRNA miRNA MGP_LPJ_T0006215.1 MGP_LPJ_G0005192.1 mouse_genomes_project 11 22402309 22488123 + 4933430M04Rik lincRNA lincRNA MGP_LPJ_T0030939.1 MGP_LPJ_G0018681.1 mouse_genomes_project 11 79889197 79918052 - MGP_LPJ_P0030939 Foxn1 protein_coding protein_coding MGP_LPJ_T0031388.1 MGP_LPJ_G0018802.1 mouse_genomes_project 11 89162678 89189104 - MGP_LPJ_P0031388 Prr11 protein_coding protein_coding MGP_LPJ_T0098905.1 MGP_LPJ_G0037168.1 mouse_genomes_project 11 54768854 54769024 + Gm23021 snRNA snRNA MGP_LPJ_T0032209.1 MGP_LPJ_G0019041.1 mouse_genomes_project 11 103388243 103391863 - MGP_LPJ_P0032209 Krt36 protein_coding protein_coding MGP_LPJ_T0012683.1 MGP_LPJ_G0010774.1 mouse_genomes_project 11 81525395 81526136 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009776.1 MGP_LPJ_G0007894.1 mouse_genomes_project 11 119643143 119643251 + Gm25837 miRNA miRNA MGP_LPJ_T0031306.1 MGP_LPJ_G0018782.1 mouse_genomes_project 11 87163457 87173887 + MGP_LPJ_P0031306 1700125H20Rik protein_coding protein_coding MGP_LPJ_T0031307.1 MGP_LPJ_G0018782.1 mouse_genomes_project 11 87164149 87173887 + MGP_LPJ_P0031307 1700125H20Rik protein_coding protein_coding MGP_LPJ_T0029098.1 MGP_LPJ_G0018239.1 mouse_genomes_project 11 55219893 55296930 - MGP_LPJ_P0029098 Fat2 protein_coding unknown_likely_coding MGP_LPJ_T0031745.1 MGP_LPJ_G0018889.1 mouse_genomes_project 11 98345399 98366175 - MGP_LPJ_P0031745 Ngfr protein_coding protein_coding MGP_LPJ_T0030479.1 MGP_LPJ_G0018570.1 mouse_genomes_project 11 74692217 74697876 - MGP_LPJ_P0030479 protein_coding protein_coding MGP_LPJ_T0030480.1 MGP_LPJ_G0018570.1 mouse_genomes_project 11 74692217 74698544 - MGP_LPJ_P0030480 protein_coding protein_coding MGP_LPJ_T0011314.1 MGP_LPJ_G0009432.1 mouse_genomes_project 11 50062470 50062746 - Gm23824 misc_RNA misc_RNA MGP_LPJ_T0006204.1 MGP_LPJ_G0005181.1 mouse_genomes_project 11 20252344 20253239 - Gm12050 lincRNA lincRNA MGP_LPJ_T0012573.1 MGP_LPJ_G0010664.1 mouse_genomes_project 11 43566495 43567498 + processed_pseudogene processed_pseudogene MGP_LPJ_T0031753.1 MGP_LPJ_G0018892.1 mouse_genomes_project 11 98517410 98520534 + MGP_LPJ_P0031753 B130006D01Rik protein_coding protein_coding MGP_LPJ_T0029457.1 MGP_LPJ_G0018348.1 mouse_genomes_project 11 62016289 62019088 + MGP_LPJ_P0029457 Mfap4 protein_coding unknown_likely_coding MGP_LPJ_T0029458.1 MGP_LPJ_G0018348.1 mouse_genomes_project 11 62016359 62019739 + MGP_LPJ_P0029458 Mfap4 protein_coding protein_coding MGP_LPJ_T0029459.1 MGP_LPJ_G0018348.1 mouse_genomes_project 11 62016389 62018914 + MGP_LPJ_P0029459 Mfap4 protein_coding protein_coding MGP_LPJ_T0029460.1 MGP_LPJ_G0018348.1 mouse_genomes_project 11 62016419 62017881 + Mfap4 protein_coding processed_transcript MGP_LPJ_T0029461.1 MGP_LPJ_G0018348.1 mouse_genomes_project 11 62016444 62019739 + Mfap4 protein_coding processed_transcript MGP_LPJ_T0003319.1 MGP_LPJ_G0003062.1 mouse_genomes_project 11 104864181 104864996 - Gm11626 antisense antisense MGP_LPJ_T0027707.1 MGP_LPJ_G0017887.1 mouse_genomes_project 11 1197989 1220164 + MGP_LPJ_P0027707 Sf3a1 protein_coding protein_coding MGP_LPJ_T0027708.1 MGP_LPJ_G0017887.1 mouse_genomes_project 11 1197994 1210733 + Sf3a1 protein_coding processed_transcript MGP_LPJ_T0027709.1 MGP_LPJ_G0017887.1 mouse_genomes_project 11 1197994 1209547 + Sf3a1 protein_coding retained_intron MGP_LPJ_T0027710.1 MGP_LPJ_G0017887.1 mouse_genomes_project 11 1215170 1217042 + Sf3a1 protein_coding retained_intron MGP_LPJ_T0031407.1 MGP_LPJ_G0018808.1 mouse_genomes_project 11 89684747 89687345 + MGP_LPJ_P0031407 Gm11492 protein_coding protein_coding MGP_LPJ_T0017206.1 MGP_LPJ_G0015131.1 mouse_genomes_project 11 116840312 116895175 - BC006965 processed_transcript processed_transcript MGP_LPJ_T0017207.1 MGP_LPJ_G0015131.1 mouse_genomes_project 11 116841200 116848573 - BC006965 processed_transcript processed_transcript MGP_LPJ_T0017208.1 MGP_LPJ_G0015131.1 mouse_genomes_project 11 116841224 116845761 - BC006965 processed_transcript processed_transcript MGP_LPJ_T0017209.1 MGP_LPJ_G0015131.1 mouse_genomes_project 11 116845563 116853364 - BC006965 processed_transcript processed_transcript MGP_LPJ_T0017210.1 MGP_LPJ_G0015131.1 mouse_genomes_project 11 116846549 116848573 - BC006965 processed_transcript processed_transcript MGP_LPJ_T0017211.1 MGP_LPJ_G0015131.1 mouse_genomes_project 11 116848449 116894741 - BC006965 processed_transcript processed_transcript MGP_LPJ_T0017212.1 MGP_LPJ_G0015131.1 mouse_genomes_project 11 116848536 116895159 - BC006965 processed_transcript processed_transcript MGP_LPJ_T0017213.1 MGP_LPJ_G0015131.1 mouse_genomes_project 11 116853433 116868977 - BC006965 processed_transcript processed_transcript MGP_LPJ_T0017214.1 MGP_LPJ_G0015131.1 mouse_genomes_project 11 116853549 116895181 - BC006965 processed_transcript processed_transcript MGP_LPJ_T0017215.1 MGP_LPJ_G0015131.1 mouse_genomes_project 11 116853624 116895159 - BC006965 processed_transcript processed_transcript MGP_LPJ_T0017216.1 MGP_LPJ_G0015131.1 mouse_genomes_project 11 116860595 116869136 - BC006965 processed_transcript processed_transcript MGP_LPJ_T0017217.1 MGP_LPJ_G0015131.1 mouse_genomes_project 11 116860706 116895182 - BC006965 processed_transcript processed_transcript MGP_LPJ_T0017218.1 MGP_LPJ_G0015131.1 mouse_genomes_project 11 116860813 116895175 - BC006965 processed_transcript processed_transcript MGP_LPJ_T0017219.1 MGP_LPJ_G0015131.1 mouse_genomes_project 11 116865260 116895160 - BC006965 processed_transcript processed_transcript MGP_LPJ_T0017220.1 MGP_LPJ_G0015131.1 mouse_genomes_project 11 116865260 116895160 - BC006965 processed_transcript processed_transcript MGP_LPJ_T0017221.1 MGP_LPJ_G0015131.1 mouse_genomes_project 11 116865262 116971964 - BC006965 processed_transcript processed_transcript MGP_LPJ_T0017222.1 MGP_LPJ_G0015131.1 mouse_genomes_project 11 116868941 116895158 - BC006965 processed_transcript processed_transcript MGP_LPJ_T0017223.1 MGP_LPJ_G0015131.1 mouse_genomes_project 11 116902674 116931335 - BC006965 processed_transcript processed_transcript MGP_LPJ_T0033624.1 MGP_LPJ_G0019337.1 mouse_genomes_project 11 121182414 121198569 + MGP_LPJ_P0033624 protein_coding protein_coding MGP_LPJ_T0033625.1 MGP_LPJ_G0019337.1 mouse_genomes_project 11 121182414 121198274 + MGP_LPJ_P0033625 protein_coding nonsense_mediated_decay MGP_LPJ_T0033626.1 MGP_LPJ_G0019337.1 mouse_genomes_project 11 121182735 121198571 + MGP_LPJ_P0033626 protein_coding protein_coding MGP_LPJ_T0033627.1 MGP_LPJ_G0019337.1 mouse_genomes_project 11 121185985 121198569 + MGP_LPJ_P0033627 protein_coding protein_coding MGP_LPJ_T0033628.1 MGP_LPJ_G0019337.1 mouse_genomes_project 11 121186033 121189012 + protein_coding retained_intron MGP_LPJ_T0031558.1 MGP_LPJ_G0018847.1 mouse_genomes_project 11 95649772 95652278 + Car10 protein_coding processed_transcript MGP_LPJ_T0031559.1 MGP_LPJ_G0018847.1 mouse_genomes_project 11 95650148 96054119 + MGP_LPJ_P0031559 Car10 protein_coding protein_coding MGP_LPJ_T0031560.1 MGP_LPJ_G0018847.1 mouse_genomes_project 11 95650148 95931635 + MGP_LPJ_P0031560 Car10 protein_coding protein_coding MGP_LPJ_T0031561.1 MGP_LPJ_G0018847.1 mouse_genomes_project 11 95650148 96161011 + MGP_LPJ_P0031561 Car10 protein_coding protein_coding MGP_LPJ_T0031562.1 MGP_LPJ_G0018847.1 mouse_genomes_project 11 95650158 96160540 + MGP_LPJ_P0031562 Car10 protein_coding protein_coding MGP_LPJ_T0031563.1 MGP_LPJ_G0018847.1 mouse_genomes_project 11 95651702 96161015 + MGP_LPJ_P0031563 Car10 protein_coding protein_coding MGP_LPJ_T0031564.1 MGP_LPJ_G0018847.1 mouse_genomes_project 11 95651702 95740307 + MGP_LPJ_P0031564 Car10 protein_coding protein_coding MGP_LPJ_T0030523.1 MGP_LPJ_G0018594.1 mouse_genomes_project 11 75575243 75576191 - MGP_LPJ_P0030523 Olfr410 protein_coding protein_coding MGP_LPJ_T0012723.1 MGP_LPJ_G0010814.1 mouse_genomes_project 11 100007570 100007964 + processed_pseudogene processed_pseudogene MGP_LPJ_T0029109.1 MGP_LPJ_G0018243.1 mouse_genomes_project 11 55511069 55611054 - MGP_LPJ_P0029109 Glra1 protein_coding protein_coding MGP_LPJ_T0029110.1 MGP_LPJ_G0018243.1 mouse_genomes_project 11 55511069 55610589 - MGP_LPJ_P0029110 Glra1 protein_coding protein_coding MGP_LPJ_T0029111.1 MGP_LPJ_G0018243.1 mouse_genomes_project 11 55511069 55610677 - MGP_LPJ_P0029111 Glra1 protein_coding protein_coding MGP_LPJ_T0029054.1 MGP_LPJ_G0018228.1 mouse_genomes_project 11 54649831 54725782 - MGP_LPJ_P0029054 Cdc42se2 protein_coding protein_coding MGP_LPJ_T0029055.1 MGP_LPJ_G0018228.1 mouse_genomes_project 11 54655944 54725753 - MGP_LPJ_P0029055 Cdc42se2 protein_coding protein_coding MGP_LPJ_T0029056.1 MGP_LPJ_G0018228.1 mouse_genomes_project 11 54673994 54725748 - Cdc42se2 protein_coding processed_transcript MGP_LPJ_T0029057.1 MGP_LPJ_G0018228.1 mouse_genomes_project 11 54674318 54725732 - Cdc42se2 protein_coding processed_transcript MGP_LPJ_T0029058.1 MGP_LPJ_G0018228.1 mouse_genomes_project 11 54674453 54695625 - Cdc42se2 protein_coding processed_transcript MGP_LPJ_T0100177.1 MGP_LPJ_G0038440.1 mouse_genomes_project 11 101763382 101763486 - Gm22059 snoRNA snoRNA MGP_LPJ_T0032928.1 MGP_LPJ_G0019193.1 mouse_genomes_project 11 109754963 109779627 + MGP_LPJ_P0032928 Dcaf7 protein_coding protein_coding MGP_LPJ_T0032929.1 MGP_LPJ_G0019193.1 mouse_genomes_project 11 109754991 109766747 + Dcaf7 protein_coding retained_intron MGP_LPJ_T0029339.1 MGP_LPJ_G0018323.1 mouse_genomes_project 11 60699220 60830393 - MGP_LPJ_P0029339 Tom1l2 protein_coding protein_coding MGP_LPJ_T0029340.1 MGP_LPJ_G0018323.1 mouse_genomes_project 11 60699221 60711681 - Tom1l2 protein_coding processed_transcript MGP_LPJ_T0029341.1 MGP_LPJ_G0018323.1 mouse_genomes_project 11 60699221 60830393 - MGP_LPJ_P0029341 Tom1l2 protein_coding protein_coding MGP_LPJ_T0029342.1 MGP_LPJ_G0018323.1 mouse_genomes_project 11 60699221 60830393 - MGP_LPJ_P0029342 Tom1l2 protein_coding protein_coding MGP_LPJ_T0029343.1 MGP_LPJ_G0018323.1 mouse_genomes_project 11 60699221 60830393 - MGP_LPJ_P0029343 Tom1l2 protein_coding protein_coding MGP_LPJ_T0029344.1 MGP_LPJ_G0018323.1 mouse_genomes_project 11 60702106 60703851 - Tom1l2 protein_coding processed_transcript MGP_LPJ_T0029345.1 MGP_LPJ_G0018323.1 mouse_genomes_project 11 60702405 60718975 - MGP_LPJ_P0029345 Tom1l2 protein_coding protein_coding MGP_LPJ_T0029346.1 MGP_LPJ_G0018323.1 mouse_genomes_project 11 60702405 60718463 - MGP_LPJ_P0029346 Tom1l2 protein_coding protein_coding MGP_LPJ_T0029347.1 MGP_LPJ_G0018323.1 mouse_genomes_project 11 60713880 60830393 - MGP_LPJ_P0029347 Tom1l2 protein_coding protein_coding MGP_LPJ_T0029348.1 MGP_LPJ_G0018323.1 mouse_genomes_project 11 60714247 60830393 - MGP_LPJ_P0029348 Tom1l2 protein_coding protein_coding MGP_LPJ_T0029349.1 MGP_LPJ_G0018323.1 mouse_genomes_project 11 60726868 60830393 - Tom1l2 protein_coding processed_transcript MGP_LPJ_T0031408.1 MGP_LPJ_G0018809.1 mouse_genomes_project 11 89686997 89703442 + MGP_LPJ_P0031408 Sept4 protein_coding protein_coding MGP_LPJ_T0031409.1 MGP_LPJ_G0018809.1 mouse_genomes_project 11 89696501 89707388 + Sept4 protein_coding retained_intron MGP_LPJ_T0031410.1 MGP_LPJ_G0018809.1 mouse_genomes_project 11 89696536 89708741 + Sept4 protein_coding retained_intron MGP_LPJ_T0031411.1 MGP_LPJ_G0018809.1 mouse_genomes_project 11 89696538 89708747 + MGP_LPJ_P0031411 Sept4 protein_coding protein_coding MGP_LPJ_T0031412.1 MGP_LPJ_G0018809.1 mouse_genomes_project 11 89696545 89704232 + Sept4 protein_coding retained_intron MGP_LPJ_T0031413.1 MGP_LPJ_G0018809.1 mouse_genomes_project 11 89696559 89708741 + Sept4 protein_coding retained_intron MGP_LPJ_T0031414.1 MGP_LPJ_G0018809.1 mouse_genomes_project 11 89696573 89704060 + Sept4 protein_coding retained_intron MGP_LPJ_T0031415.1 MGP_LPJ_G0018809.1 mouse_genomes_project 11 89697017 89707476 + MGP_LPJ_P0031415 Sept4 protein_coding protein_coding MGP_LPJ_T0031416.1 MGP_LPJ_G0018809.1 mouse_genomes_project 11 89699206 89708741 + MGP_LPJ_P0031416 Sept4 protein_coding protein_coding MGP_LPJ_T0031417.1 MGP_LPJ_G0018809.1 mouse_genomes_project 11 89699226 89708577 + MGP_LPJ_P0031417 Sept4 protein_coding protein_coding MGP_LPJ_T0031418.1 MGP_LPJ_G0018809.1 mouse_genomes_project 11 89699234 89704232 + Sept4 protein_coding retained_intron MGP_LPJ_T0031419.1 MGP_LPJ_G0018809.1 mouse_genomes_project 11 89699239 89708741 + Sept4 protein_coding retained_intron MGP_LPJ_T0031420.1 MGP_LPJ_G0018809.1 mouse_genomes_project 11 89700374 89707243 + MGP_LPJ_P0031420 Sept4 protein_coding protein_coding MGP_LPJ_T0031421.1 MGP_LPJ_G0018809.1 mouse_genomes_project 11 89703425 89708066 + Sept4 protein_coding retained_intron MGP_LPJ_T0031422.1 MGP_LPJ_G0018809.1 mouse_genomes_project 11 89707069 89708196 + Sept4 protein_coding retained_intron MGP_LPJ_T0031423.1 MGP_LPJ_G0018809.1 mouse_genomes_project 11 89707678 89708741 + Sept4 protein_coding processed_transcript MGP_LPJ_T0032199.1 MGP_LPJ_G0019033.1 mouse_genomes_project 11 103240495 103241524 - MGP_LPJ_P0032199 Krtap29-1 protein_coding protein_coding MGP_LPJ_T0032205.1 MGP_LPJ_G0019039.1 mouse_genomes_project 11 103367106 103371683 - Krt32 protein_coding processed_transcript MGP_LPJ_T0032206.1 MGP_LPJ_G0019039.1 mouse_genomes_project 11 103367115 103374465 - MGP_LPJ_P0032206 Krt32 protein_coding protein_coding MGP_LPJ_T0033168.1 MGP_LPJ_G0019247.1 mouse_genomes_project 11 114427466 114549745 + MGP_LPJ_P0033168 Map2k6 protein_coding protein_coding MGP_LPJ_T0033169.1 MGP_LPJ_G0019247.1 mouse_genomes_project 11 114427466 114561600 + MGP_LPJ_P0033169 Map2k6 protein_coding protein_coding MGP_LPJ_T0033170.1 MGP_LPJ_G0019247.1 mouse_genomes_project 11 114427603 114549745 + Map2k6 protein_coding processed_transcript MGP_LPJ_T0033171.1 MGP_LPJ_G0019247.1 mouse_genomes_project 11 114511989 114535795 + Map2k6 protein_coding processed_transcript MGP_LPJ_T0033172.1 MGP_LPJ_G0019247.1 mouse_genomes_project 11 114515326 114534200 + Map2k6 protein_coding processed_transcript MGP_LPJ_T0033173.1 MGP_LPJ_G0019247.1 mouse_genomes_project 11 114515471 114548971 + MGP_LPJ_P0033173 Map2k6 protein_coding unknown_likely_coding MGP_LPJ_T0033174.1 MGP_LPJ_G0019247.1 mouse_genomes_project 11 114515477 114548971 + MGP_LPJ_P0033174 Map2k6 protein_coding unknown_likely_coding MGP_LPJ_T0027737.1 MGP_LPJ_G0017895.1 mouse_genomes_project 11 1700369 1748945 + MGP_LPJ_P0027737 Ascc2 protein_coding protein_coding MGP_LPJ_T0027738.1 MGP_LPJ_G0017895.1 mouse_genomes_project 11 1700369 1751259 + MGP_LPJ_P0027738 Ascc2 protein_coding protein_coding MGP_LPJ_T0028865.1 MGP_LPJ_G0018181.1 mouse_genomes_project 11 51316863 51325568 - MGP_LPJ_P0028865 N4bp3 protein_coding protein_coding MGP_LPJ_T0028866.1 MGP_LPJ_G0018181.1 mouse_genomes_project 11 51319354 51325563 - MGP_LPJ_P0028866 N4bp3 protein_coding protein_coding MGP_LPJ_T0028867.1 MGP_LPJ_G0018181.1 mouse_genomes_project 11 51319419 51325546 - MGP_LPJ_P0028867 N4bp3 protein_coding protein_coding MGP_LPJ_T0031475.1 MGP_LPJ_G0018823.1 mouse_genomes_project 11 90243935 90250313 + MGP_LPJ_P0031475 Srsf1 protein_coding protein_coding MGP_LPJ_T0031476.1 MGP_LPJ_G0018823.1 mouse_genomes_project 11 90244281 90248054 + MGP_LPJ_P0031476 Srsf1 protein_coding protein_coding MGP_LPJ_T0031477.1 MGP_LPJ_G0018823.1 mouse_genomes_project 11 90244288 90245392 + Srsf1 protein_coding retained_intron MGP_LPJ_T0031478.1 MGP_LPJ_G0018823.1 mouse_genomes_project 11 90244368 90246975 + MGP_LPJ_P0031478 Srsf1 protein_coding protein_coding MGP_LPJ_T0031479.1 MGP_LPJ_G0018823.1 mouse_genomes_project 11 90245132 90248036 + MGP_LPJ_P0031479 Srsf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0031480.1 MGP_LPJ_G0018823.1 mouse_genomes_project 11 90245154 90247687 + MGP_LPJ_P0031480 Srsf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0031481.1 MGP_LPJ_G0018823.1 mouse_genomes_project 11 90245977 90247616 + Srsf1 protein_coding retained_intron MGP_LPJ_T0017123.1 MGP_LPJ_G0015080.1 mouse_genomes_project 11 44919923 44954986 + F630206G17Rik processed_transcript processed_transcript MGP_LPJ_T0030575.1 MGP_LPJ_G0018606.1 mouse_genomes_project 11 76234227 76488839 + MGP_LPJ_P0030575 Smg6 protein_coding protein_coding MGP_LPJ_T0030576.1 MGP_LPJ_G0018606.1 mouse_genomes_project 11 76238922 76488839 + MGP_LPJ_P0030576 Smg6 protein_coding nonsense_mediated_decay MGP_LPJ_T0030577.1 MGP_LPJ_G0018606.1 mouse_genomes_project 11 76302417 76305263 + Smg6 protein_coding retained_intron MGP_LPJ_T0030578.1 MGP_LPJ_G0018606.1 mouse_genomes_project 11 76306909 76463848 + MGP_LPJ_P0030578 Smg6 protein_coding protein_coding MGP_LPJ_T0030579.1 MGP_LPJ_G0018606.1 mouse_genomes_project 11 76456913 76463848 + Smg6 protein_coding processed_transcript MGP_LPJ_T0030580.1 MGP_LPJ_G0018606.1 mouse_genomes_project 11 76484033 76487572 + Smg6 protein_coding processed_transcript MGP_LPJ_T0032260.1 MGP_LPJ_G0019057.1 mouse_genomes_project 11 103751296 103769225 + MGP_LPJ_P0032260 Klhl10 protein_coding protein_coding MGP_LPJ_T0032261.1 MGP_LPJ_G0019057.1 mouse_genomes_project 11 103751306 103757616 + MGP_LPJ_P0032261 Klhl10 protein_coding protein_coding MGP_LPJ_T0031842.1 MGP_LPJ_G0018918.1 mouse_genomes_project 11 99727038 99728763 + Copz2 protein_coding retained_intron MGP_LPJ_T0031843.1 MGP_LPJ_G0018918.1 mouse_genomes_project 11 99727044 99738342 + MGP_LPJ_P0031843 Copz2 protein_coding protein_coding MGP_LPJ_T0031844.1 MGP_LPJ_G0018918.1 mouse_genomes_project 11 99727049 99731326 + MGP_LPJ_P0031844 Copz2 protein_coding nonsense_mediated_decay MGP_LPJ_T0031845.1 MGP_LPJ_G0018918.1 mouse_genomes_project 11 99731072 99734120 + Copz2 protein_coding retained_intron MGP_LPJ_T0031846.1 MGP_LPJ_G0018918.1 mouse_genomes_project 11 99731303 99738342 + MGP_LPJ_P0031846 Copz2 protein_coding nonsense_mediated_decay MGP_LPJ_T0003318.1 MGP_LPJ_G0003061.1 mouse_genomes_project 11 104732676 104741912 - Gm28156 antisense antisense MGP_LPJ_T0032274.1 MGP_LPJ_G0019061.1 mouse_genomes_project 11 103900318 103907143 + MGP_LPJ_P0032274 Cnp protein_coding protein_coding MGP_LPJ_T0032275.1 MGP_LPJ_G0019061.1 mouse_genomes_project 11 103900526 103901865 + Cnp protein_coding processed_transcript MGP_LPJ_T0032276.1 MGP_LPJ_G0019061.1 mouse_genomes_project 11 103900938 103907143 + Cnp protein_coding processed_transcript MGP_LPJ_T0032277.1 MGP_LPJ_G0019061.1 mouse_genomes_project 11 103901305 103917078 + Cnp protein_coding processed_transcript MGP_LPJ_T0009724.1 MGP_LPJ_G0007842.1 mouse_genomes_project 11 76182145 76182213 - Mir6926 miRNA miRNA MGP_LPJ_T0034088.1 MGP_LPJ_G0019428.1 mouse_genomes_project 11 125507890 125510390 + MGP_LPJ_P0034088 Rac3 protein_coding protein_coding MGP_LPJ_T0034089.1 MGP_LPJ_G0019428.1 mouse_genomes_project 11 125507993 125510027 + MGP_LPJ_P0034089 Rac3 protein_coding protein_coding MGP_LPJ_T0034090.1 MGP_LPJ_G0019428.1 mouse_genomes_project 11 125508434 125509986 + Rac3 protein_coding processed_transcript MGP_LPJ_T0033235.1 MGP_LPJ_G0019262.1 mouse_genomes_project 11 119110715 119131532 + Kif19a protein_coding processed_transcript MGP_LPJ_T0033236.1 MGP_LPJ_G0019262.1 mouse_genomes_project 11 119110715 119131532 + Kif19a protein_coding processed_transcript MGP_LPJ_T0033237.1 MGP_LPJ_G0019262.1 mouse_genomes_project 11 119110715 119133492 + MGP_LPJ_P0033237 Kif19a protein_coding protein_coding MGP_LPJ_T0033238.1 MGP_LPJ_G0019262.1 mouse_genomes_project 11 119110716 119135937 + MGP_LPJ_P0033238 Kif19a protein_coding protein_coding MGP_LPJ_T0033239.1 MGP_LPJ_G0019262.1 mouse_genomes_project 11 119130011 119130920 + Kif19a protein_coding retained_intron MGP_LPJ_T0033240.1 MGP_LPJ_G0019262.1 mouse_genomes_project 11 119133259 119136102 + MGP_LPJ_P0033240 Kif19a protein_coding protein_coding MGP_LPJ_T0033241.1 MGP_LPJ_G0019262.1 mouse_genomes_project 11 119133301 119134694 + Kif19a protein_coding retained_intron MGP_LPJ_T0030365.1 MGP_LPJ_G0018536.1 mouse_genomes_project 11 73329690 73332579 - MGP_LPJ_P0030365 Gm43951 protein_coding protein_coding MGP_LPJ_T0031359.1 MGP_LPJ_G0018794.1 mouse_genomes_project 11 88598501 88622965 + MGP_LPJ_P0031359 Tubd1 protein_coding protein_coding MGP_LPJ_T0031360.1 MGP_LPJ_G0018794.1 mouse_genomes_project 11 88598501 88622966 + MGP_LPJ_P0031360 Tubd1 protein_coding protein_coding MGP_LPJ_T0031361.1 MGP_LPJ_G0018794.1 mouse_genomes_project 11 88598501 88622966 + MGP_LPJ_P0031361 Tubd1 protein_coding protein_coding MGP_LPJ_T0031362.1 MGP_LPJ_G0018794.1 mouse_genomes_project 11 88598501 88622966 + MGP_LPJ_P0031362 Tubd1 protein_coding protein_coding MGP_LPJ_T0031363.1 MGP_LPJ_G0018794.1 mouse_genomes_project 11 88608489 88622966 + MGP_LPJ_P0031363 Tubd1 protein_coding protein_coding MGP_LPJ_T0006280.1 MGP_LPJ_G0005247.1 mouse_genomes_project 11 67774764 67783960 + lincRNA lincRNA MGP_LPJ_T0006281.1 MGP_LPJ_G0005247.1 mouse_genomes_project 11 67775989 67784463 + lincRNA lincRNA MGP_LPJ_T0029040.1 MGP_LPJ_G0018225.1 mouse_genomes_project 11 54297746 54352893 + Meikin protein_coding retained_intron MGP_LPJ_T0029041.1 MGP_LPJ_G0018225.1 mouse_genomes_project 11 54297746 54352928 + MGP_LPJ_P0029041 Meikin protein_coding protein_coding MGP_LPJ_T0028137.1 MGP_LPJ_G0017989.1 mouse_genomes_project 11 20656637 20810322 - MGP_LPJ_P0028137 Gm28048 protein_coding protein_coding MGP_LPJ_T0028111.1 MGP_LPJ_G0017982.1 mouse_genomes_project 11 19069977 19121862 - MGP_LPJ_P0028111 Ugp2 protein_coding protein_coding MGP_LPJ_T0028112.1 MGP_LPJ_G0017982.1 mouse_genomes_project 11 19070511 19122643 - MGP_LPJ_P0028112 Ugp2 protein_coding protein_coding MGP_LPJ_T0028113.1 MGP_LPJ_G0017982.1 mouse_genomes_project 11 19070762 19078723 - Ugp2 protein_coding processed_transcript MGP_LPJ_T0028114.1 MGP_LPJ_G0017982.1 mouse_genomes_project 11 19070778 19072341 - Ugp2 protein_coding processed_transcript MGP_LPJ_T0032425.1 MGP_LPJ_G0019094.1 mouse_genomes_project 11 104676410 104690402 - Becn1 protein_coding retained_intron MGP_LPJ_T0032426.1 MGP_LPJ_G0019094.1 mouse_genomes_project 11 104676410 104690410 - Becn1 protein_coding retained_intron MGP_LPJ_T0032427.1 MGP_LPJ_G0019094.1 mouse_genomes_project 11 104676410 104690436 - MGP_LPJ_P0032427 Becn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0032428.1 MGP_LPJ_G0019094.1 mouse_genomes_project 11 104676412 104690417 - MGP_LPJ_P0032428 Becn1 protein_coding protein_coding MGP_LPJ_T0032429.1 MGP_LPJ_G0019094.1 mouse_genomes_project 11 104677024 104690387 - MGP_LPJ_P0032429 Becn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0032430.1 MGP_LPJ_G0019094.1 mouse_genomes_project 11 104677036 104682191 - Becn1 protein_coding retained_intron MGP_LPJ_T0032431.1 MGP_LPJ_G0019094.1 mouse_genomes_project 11 104678028 104680648 - Becn1 protein_coding processed_transcript MGP_LPJ_T0032432.1 MGP_LPJ_G0019094.1 mouse_genomes_project 11 104678633 104689887 - MGP_LPJ_P0032432 Becn1 protein_coding protein_coding MGP_LPJ_T0032433.1 MGP_LPJ_G0019094.1 mouse_genomes_project 11 104679532 104684457 - MGP_LPJ_P0032433 Becn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0032434.1 MGP_LPJ_G0019094.1 mouse_genomes_project 11 104679648 104690388 - MGP_LPJ_P0032434 Becn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0032435.1 MGP_LPJ_G0019094.1 mouse_genomes_project 11 104679679 104683586 - Becn1 protein_coding retained_intron MGP_LPJ_T0032436.1 MGP_LPJ_G0019094.1 mouse_genomes_project 11 104683696 104690356 - MGP_LPJ_P0032436 Becn1 protein_coding protein_coding MGP_LPJ_T0032437.1 MGP_LPJ_G0019094.1 mouse_genomes_project 11 104684056 104690399 - MGP_LPJ_P0032437 Becn1 protein_coding protein_coding MGP_LPJ_T0032438.1 MGP_LPJ_G0019094.1 mouse_genomes_project 11 104684375 104690390 - Becn1 protein_coding retained_intron MGP_LPJ_T0032439.1 MGP_LPJ_G0019094.1 mouse_genomes_project 11 104686226 104690405 - Becn1 protein_coding processed_transcript MGP_LPJ_T0032440.1 MGP_LPJ_G0019094.1 mouse_genomes_project 11 104689610 104690391 - Becn1 protein_coding retained_intron MGP_LPJ_T0033595.1 MGP_LPJ_G0019332.1 mouse_genomes_project 11 121048842 121054601 + MGP_LPJ_P0033595 Sphk1 protein_coding protein_coding MGP_LPJ_T0033596.1 MGP_LPJ_G0019332.1 mouse_genomes_project 11 121049038 121053644 + MGP_LPJ_P0033596 Sphk1 protein_coding protein_coding MGP_LPJ_T0033597.1 MGP_LPJ_G0019332.1 mouse_genomes_project 11 121049079 121053228 + Sphk1 protein_coding retained_intron MGP_LPJ_T0033598.1 MGP_LPJ_G0019332.1 mouse_genomes_project 11 121049659 121054601 + MGP_LPJ_P0033598 Sphk1 protein_coding protein_coding MGP_LPJ_T0033599.1 MGP_LPJ_G0019332.1 mouse_genomes_project 11 121049826 121054614 + MGP_LPJ_P0033599 Sphk1 protein_coding protein_coding MGP_LPJ_T0033600.1 MGP_LPJ_G0019332.1 mouse_genomes_project 11 121050359 121054618 + MGP_LPJ_P0033600 Sphk1 protein_coding protein_coding MGP_LPJ_T0033601.1 MGP_LPJ_G0019332.1 mouse_genomes_project 11 121050366 121054612 + Sphk1 protein_coding retained_intron MGP_LPJ_T0033602.1 MGP_LPJ_G0019332.1 mouse_genomes_project 11 121050369 121053656 + MGP_LPJ_P0033602 Sphk1 protein_coding protein_coding MGP_LPJ_T0033603.1 MGP_LPJ_G0019332.1 mouse_genomes_project 11 121050372 121053285 + MGP_LPJ_P0033603 Sphk1 protein_coding protein_coding MGP_LPJ_T0033604.1 MGP_LPJ_G0019332.1 mouse_genomes_project 11 121050388 121054618 + MGP_LPJ_P0033604 Sphk1 protein_coding protein_coding MGP_LPJ_T0033605.1 MGP_LPJ_G0019332.1 mouse_genomes_project 11 121050840 121054601 + MGP_LPJ_P0033605 Sphk1 protein_coding protein_coding MGP_LPJ_T0033606.1 MGP_LPJ_G0019332.1 mouse_genomes_project 11 121051166 121053580 + Sphk1 protein_coding processed_transcript MGP_LPJ_T0033607.1 MGP_LPJ_G0019332.1 mouse_genomes_project 11 121051183 121053939 + MGP_LPJ_P0033607 Sphk1 protein_coding protein_coding MGP_LPJ_T0033608.1 MGP_LPJ_G0019332.1 mouse_genomes_project 11 121051490 121053642 + MGP_LPJ_P0033608 Sphk1 protein_coding protein_coding MGP_LPJ_T0033609.1 MGP_LPJ_G0019332.1 mouse_genomes_project 11 121052075 121053232 + Sphk1 protein_coding retained_intron MGP_LPJ_T0033610.1 MGP_LPJ_G0019332.1 mouse_genomes_project 11 121052683 121054614 + MGP_LPJ_P0033610 Sphk1 protein_coding protein_coding MGP_LPJ_T0033054.1 MGP_LPJ_G0019221.1 mouse_genomes_project 11 111030438 111317419 - MGP_LPJ_P0033054 Pitpnc1 protein_coding protein_coding MGP_LPJ_T0033055.1 MGP_LPJ_G0019221.1 mouse_genomes_project 11 111030438 111177228 - MGP_LPJ_P0033055 Pitpnc1 protein_coding protein_coding MGP_LPJ_T0033056.1 MGP_LPJ_G0019221.1 mouse_genomes_project 11 111052066 111187531 - MGP_LPJ_P0033056 Pitpnc1 protein_coding protein_coding MGP_LPJ_T0033057.1 MGP_LPJ_G0019221.1 mouse_genomes_project 11 111158377 111177117 - Pitpnc1 protein_coding processed_transcript MGP_LPJ_T0028080.1 MGP_LPJ_G0017975.1 mouse_genomes_project 11 17910715 17933028 - MGP_LPJ_P0028080 Cep68 protein_coding protein_coding MGP_LPJ_T0028081.1 MGP_LPJ_G0017975.1 mouse_genomes_project 11 17922058 17933116 - MGP_LPJ_P0028081 Cep68 protein_coding protein_coding MGP_LPJ_T0028082.1 MGP_LPJ_G0017975.1 mouse_genomes_project 11 17925204 17933081 - Cep68 protein_coding retained_intron MGP_LPJ_T0033364.1 MGP_LPJ_G0019293.1 mouse_genomes_project 11 119911762 119932438 - MGP_LPJ_P0033364 Hn1 protein_coding protein_coding MGP_LPJ_T0033365.1 MGP_LPJ_G0019293.1 mouse_genomes_project 11 119913087 119932199 - Hn1 protein_coding processed_transcript MGP_LPJ_T0033366.1 MGP_LPJ_G0019293.1 mouse_genomes_project 11 119913186 119932399 - Hn1 protein_coding processed_transcript MGP_LPJ_T0033367.1 MGP_LPJ_G0019293.1 mouse_genomes_project 11 119916366 119932422 - Hn1 protein_coding processed_transcript MGP_LPJ_T0033368.1 MGP_LPJ_G0019293.1 mouse_genomes_project 11 119918856 119932167 - Hn1 protein_coding processed_transcript MGP_LPJ_T0031036.1 MGP_LPJ_G0018708.1 mouse_genomes_project 11 81750530 81798508 + MGP_LPJ_P0031036 Atad5 protein_coding protein_coding MGP_LPJ_T0031037.1 MGP_LPJ_G0018708.1 mouse_genomes_project 11 81750530 81798511 + MGP_LPJ_P0031037 Atad5 protein_coding protein_coding MGP_LPJ_T0031038.1 MGP_LPJ_G0018708.1 mouse_genomes_project 11 81763673 81798511 + Atad5 protein_coding processed_transcript MGP_LPJ_T0031039.1 MGP_LPJ_G0018708.1 mouse_genomes_project 11 81764792 81770332 + Atad5 protein_coding retained_intron MGP_LPJ_T0012662.1 MGP_LPJ_G0010753.1 mouse_genomes_project 11 74976736 74976933 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012653.1 MGP_LPJ_G0010744.1 mouse_genomes_project 11 71895995 71896416 + processed_pseudogene processed_pseudogene MGP_LPJ_T0031139.1 MGP_LPJ_G0018737.1 mouse_genomes_project 11 84699517 84707229 - MGP_LPJ_P0031139 Nle1 protein_coding protein_coding MGP_LPJ_T0031140.1 MGP_LPJ_G0018737.1 mouse_genomes_project 11 84699521 84700572 - Nle1 protein_coding retained_intron MGP_LPJ_T0031141.1 MGP_LPJ_G0018737.1 mouse_genomes_project 11 84699529 84703103 - MGP_LPJ_P0031141 Nle1 protein_coding nonsense_mediated_decay MGP_LPJ_T0031142.1 MGP_LPJ_G0018737.1 mouse_genomes_project 11 84700494 84703082 - Nle1 protein_coding retained_intron MGP_LPJ_T0031143.1 MGP_LPJ_G0018737.1 mouse_genomes_project 11 84702903 84703460 - Nle1 protein_coding retained_intron MGP_LPJ_T0031144.1 MGP_LPJ_G0018737.1 mouse_genomes_project 11 84703615 84706505 - MGP_LPJ_P0031144 Nle1 protein_coding nonsense_mediated_decay MGP_LPJ_T0031145.1 MGP_LPJ_G0018737.1 mouse_genomes_project 11 84703745 84707160 - Nle1 protein_coding retained_intron MGP_LPJ_T0012611.1 MGP_LPJ_G0010702.1 mouse_genomes_project 11 58050916 58051207 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098934.1 MGP_LPJ_G0037197.1 mouse_genomes_project 11 89546553 89546660 - Gm23137 snRNA snRNA MGP_LPJ_T0030498.1 MGP_LPJ_G0018582.1 mouse_genomes_project 11 75152651 75153701 + MGP_LPJ_P0030498 Olfr23 protein_coding protein_coding MGP_LPJ_T0029256.1 MGP_LPJ_G0018306.1 mouse_genomes_project 11 59841283 59883766 - MGP_LPJ_P0029256 Snap47 protein_coding protein_coding MGP_LPJ_T0029257.1 MGP_LPJ_G0018306.1 mouse_genomes_project 11 59841293 59883774 - MGP_LPJ_P0029257 Snap47 protein_coding protein_coding MGP_LPJ_T0029258.1 MGP_LPJ_G0018306.1 mouse_genomes_project 11 59863777 59883766 - MGP_LPJ_P0029258 Snap47 protein_coding protein_coding MGP_LPJ_T0029259.1 MGP_LPJ_G0018306.1 mouse_genomes_project 11 59863783 59883680 - MGP_LPJ_P0029259 Snap47 protein_coding protein_coding MGP_LPJ_T0029260.1 MGP_LPJ_G0018306.1 mouse_genomes_project 11 59872144 59883766 - MGP_LPJ_P0029260 Snap47 protein_coding protein_coding MGP_LPJ_T0029261.1 MGP_LPJ_G0018306.1 mouse_genomes_project 11 59872366 59881322 - MGP_LPJ_P0029261 Snap47 protein_coding protein_coding MGP_LPJ_T0029262.1 MGP_LPJ_G0018306.1 mouse_genomes_project 11 59872398 59883683 - MGP_LPJ_P0029262 Snap47 protein_coding protein_coding MGP_LPJ_T0029263.1 MGP_LPJ_G0018306.1 mouse_genomes_project 11 59872559 59884953 - MGP_LPJ_P0029263 Snap47 protein_coding protein_coding MGP_LPJ_T0006231.1 MGP_LPJ_G0005202.1 mouse_genomes_project 11 30237744 30243341 + Gm12107 lincRNA lincRNA MGP_LPJ_T0017186.1 MGP_LPJ_G0015113.1 mouse_genomes_project 11 99924296 99932347 - Gm11532 processed_transcript processed_transcript MGP_LPJ_T0009764.1 MGP_LPJ_G0007882.1 mouse_genomes_project 11 105704231 105704342 - Mir8101 miRNA miRNA MGP_LPJ_T0032222.1 MGP_LPJ_G0019048.1 mouse_genomes_project 11 103551903 103556716 - MGP_LPJ_P0032222 Krt17 protein_coding protein_coding MGP_LPJ_T0029153.1 MGP_LPJ_G0018259.1 mouse_genomes_project 11 58543952 58551527 + MGP_LPJ_P0029153 Zfp692 protein_coding protein_coding MGP_LPJ_T0029154.1 MGP_LPJ_G0018259.1 mouse_genomes_project 11 58544055 58551541 + MGP_LPJ_P0029154 Zfp692 protein_coding protein_coding MGP_LPJ_T0012554.1 MGP_LPJ_G0010645.1 mouse_genomes_project 11 31956015 31956403 - processed_pseudogene processed_pseudogene MGP_LPJ_T0029533.1 MGP_LPJ_G0018359.1 mouse_genomes_project 11 62822145 62841678 + MGP_LPJ_P0029533 Adora2b protein_coding protein_coding MGP_LPJ_T0029197.1 MGP_LPJ_G0018280.1 mouse_genomes_project 11 58998136 58999159 + MGP_LPJ_P0029197 Olfr319 protein_coding protein_coding MGP_LPJ_T0029703.1 MGP_LPJ_G0018399.1 mouse_genomes_project 11 68532859 68647851 - MGP_LPJ_P0029703 Glp2r protein_coding protein_coding MGP_LPJ_T0029706.1 MGP_LPJ_G0018399.1 mouse_genomes_project 11 68592773 68661346 - MGP_LPJ_P0029706 Glp2r protein_coding protein_coding MGP_LPJ_T0027626.1 MGP_LPJ_G0017869.1 mouse_genomes_project 11 464392 475205 - MGP_LPJ_P0027626 protein_coding unknown_likely_coding MGP_LPJ_T0027627.1 MGP_LPJ_G0017869.1 mouse_genomes_project 11 464401 474587 - MGP_LPJ_P0027627 protein_coding nonsense_mediated_decay MGP_LPJ_T0027628.1 MGP_LPJ_G0017869.1 mouse_genomes_project 11 464401 474590 - MGP_LPJ_P0027628 protein_coding non_stop_decay MGP_LPJ_T0027629.1 MGP_LPJ_G0017869.1 mouse_genomes_project 11 464401 471950 - MGP_LPJ_P0027629 protein_coding protein_coding MGP_LPJ_T0027630.1 MGP_LPJ_G0017869.1 mouse_genomes_project 11 464566 474602 - MGP_LPJ_P0027630 protein_coding nonsense_mediated_decay MGP_LPJ_T0027631.1 MGP_LPJ_G0017869.1 mouse_genomes_project 11 468767 474615 - MGP_LPJ_P0027631 protein_coding nonsense_mediated_decay MGP_LPJ_T0029566.1 MGP_LPJ_G0018364.1 mouse_genomes_project 11 63119348 63134918 - MGP_LPJ_P0029566 Cenpv protein_coding protein_coding MGP_LPJ_T0029567.1 MGP_LPJ_G0018364.1 mouse_genomes_project 11 63119351 63122300 - Cenpv protein_coding retained_intron MGP_LPJ_T0029568.1 MGP_LPJ_G0018364.1 mouse_genomes_project 11 63119545 63134142 - Cenpv protein_coding processed_transcript MGP_LPJ_T0029569.1 MGP_LPJ_G0018364.1 mouse_genomes_project 11 63121896 63134286 - Cenpv protein_coding processed_transcript MGP_LPJ_T0029570.1 MGP_LPJ_G0018364.1 mouse_genomes_project 11 63128344 63134660 - MGP_LPJ_P0029570 Cenpv protein_coding nonsense_mediated_decay MGP_LPJ_T0029571.1 MGP_LPJ_G0018364.1 mouse_genomes_project 11 63128575 63134660 - Cenpv protein_coding processed_transcript MGP_LPJ_T0098901.1 MGP_LPJ_G0037164.1 mouse_genomes_project 11 47134642 47134803 - Gm23039 snRNA snRNA MGP_LPJ_T0029761.1 MGP_LPJ_G0018414.1 mouse_genomes_project 11 69864689 69868405 + MGP_LPJ_P0029761 protein_coding protein_coding MGP_LPJ_T0029762.1 MGP_LPJ_G0018414.1 mouse_genomes_project 11 69866747 69868428 + protein_coding retained_intron MGP_LPJ_T0029763.1 MGP_LPJ_G0018414.1 mouse_genomes_project 11 69867128 69870884 + protein_coding processed_transcript MGP_LPJ_T0029625.1 MGP_LPJ_G0018380.1 mouse_genomes_project 11 65132253 65230435 + MGP_LPJ_P0029625 Hs3st3a1 protein_coding protein_coding MGP_LPJ_T0032180.1 MGP_LPJ_G0019014.1 mouse_genomes_project 11 102822051 102823170 - MGP_LPJ_P0032180 Krtap4-7 protein_coding protein_coding MGP_LPJ_T0027932.1 MGP_LPJ_G0017938.1 mouse_genomes_project 11 3826319 3837679 - MGP_LPJ_P0027932 Tbrg4 protein_coding nonsense_mediated_decay MGP_LPJ_T0027933.1 MGP_LPJ_G0017938.1 mouse_genomes_project 11 3826320 3837703 - MGP_LPJ_P0027933 Tbrg4 protein_coding protein_coding MGP_LPJ_T0027934.1 MGP_LPJ_G0017938.1 mouse_genomes_project 11 3827144 3837679 - MGP_LPJ_P0027934 Tbrg4 protein_coding protein_coding MGP_LPJ_T0027935.1 MGP_LPJ_G0017938.1 mouse_genomes_project 11 3827146 3837679 - MGP_LPJ_P0027935 Tbrg4 protein_coding nonsense_mediated_decay MGP_LPJ_T0027936.1 MGP_LPJ_G0017938.1 mouse_genomes_project 11 3827975 3828751 - Tbrg4 protein_coding retained_intron MGP_LPJ_T0027937.1 MGP_LPJ_G0017938.1 mouse_genomes_project 11 3830277 3831635 - Tbrg4 protein_coding processed_transcript MGP_LPJ_T0027938.1 MGP_LPJ_G0017938.1 mouse_genomes_project 11 3830307 3831165 - Tbrg4 protein_coding retained_intron MGP_LPJ_T0027939.1 MGP_LPJ_G0017938.1 mouse_genomes_project 11 3830721 3831971 - Tbrg4 protein_coding retained_intron MGP_LPJ_T0027940.1 MGP_LPJ_G0017938.1 mouse_genomes_project 11 3830899 3831785 - Tbrg4 protein_coding processed_transcript MGP_LPJ_T0027941.1 MGP_LPJ_G0017938.1 mouse_genomes_project 11 3831716 3837703 - MGP_LPJ_P0027941 Tbrg4 protein_coding protein_coding MGP_LPJ_T0027942.1 MGP_LPJ_G0017938.1 mouse_genomes_project 11 3833925 3837658 - Tbrg4 protein_coding processed_transcript MGP_LPJ_T0027943.1 MGP_LPJ_G0017938.1 mouse_genomes_project 11 3834618 3836193 - MGP_LPJ_P0027943 Tbrg4 protein_coding protein_coding MGP_LPJ_T0012745.1 MGP_LPJ_G0010836.1 mouse_genomes_project 11 108467131 108468200 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003248.1 MGP_LPJ_G0003008.1 mouse_genomes_project 11 77220715 77221241 + Gm16075 antisense antisense MGP_LPJ_T0101795.1 MGP_LPJ_G0039833.1 mouse_genomes_project 11 104746200 104747097 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0032531.1 MGP_LPJ_G0019115.1 mouse_genomes_project 11 105420401 105425049 - MGP_LPJ_P0032531 Sost protein_coding protein_coding MGP_LPJ_T0033962.1 MGP_LPJ_G0019406.1 mouse_genomes_project 11 125222978 125233689 + MGP_LPJ_P0033962 Ccdc137 protein_coding protein_coding MGP_LPJ_T0033963.1 MGP_LPJ_G0019406.1 mouse_genomes_project 11 125222989 125224233 + Ccdc137 protein_coding processed_transcript MGP_LPJ_T0033964.1 MGP_LPJ_G0019406.1 mouse_genomes_project 11 125223001 125223709 + Ccdc137 protein_coding retained_intron MGP_LPJ_T0033965.1 MGP_LPJ_G0019406.1 mouse_genomes_project 11 125223005 125224975 + MGP_LPJ_P0033965 Ccdc137 protein_coding protein_coding MGP_LPJ_T0033966.1 MGP_LPJ_G0019406.1 mouse_genomes_project 11 125223010 125227076 + MGP_LPJ_P0033966 Ccdc137 protein_coding protein_coding MGP_LPJ_T0033967.1 MGP_LPJ_G0019406.1 mouse_genomes_project 11 125223049 125224868 + Ccdc137 protein_coding processed_transcript MGP_LPJ_T0033968.1 MGP_LPJ_G0019406.1 mouse_genomes_project 11 125224664 125227192 + Ccdc137 protein_coding retained_intron MGP_LPJ_T0033969.1 MGP_LPJ_G0019406.1 mouse_genomes_project 11 125227125 125233688 + Ccdc137 protein_coding processed_transcript MGP_LPJ_T0003179.1 MGP_LPJ_G0002951.1 mouse_genomes_project 11 51735695 51738280 - antisense antisense MGP_LPJ_T0012571.1 MGP_LPJ_G0010662.1 mouse_genomes_project 11 42693012 42693696 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101772.1 MGP_LPJ_G0039810.1 mouse_genomes_project 11 74933862 74934421 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0031308.1 MGP_LPJ_G0018783.1 mouse_genomes_project 11 87179982 87230580 - MGP_LPJ_P0031308 Appbp2 protein_coding protein_coding MGP_LPJ_T0097979.1 MGP_LPJ_G0036260.1 mouse_genomes_project 11 125409684 125410184 - pseudogene pseudogene MGP_LPJ_T0030043.1 MGP_LPJ_G0018476.1 mouse_genomes_project 11 71014089 71019727 - Slc2a4 protein_coding retained_intron MGP_LPJ_T0030044.1 MGP_LPJ_G0018476.1 mouse_genomes_project 11 71014919 71019533 - MGP_LPJ_P0030044 Slc2a4 protein_coding protein_coding MGP_LPJ_T0030045.1 MGP_LPJ_G0018476.1 mouse_genomes_project 11 71015342 71019716 - MGP_LPJ_P0030045 Slc2a4 protein_coding protein_coding MGP_LPJ_T0030046.1 MGP_LPJ_G0018476.1 mouse_genomes_project 11 71016818 71019526 - MGP_LPJ_P0030046 Slc2a4 protein_coding nonsense_mediated_decay MGP_LPJ_T0030047.1 MGP_LPJ_G0018476.1 mouse_genomes_project 11 71016818 71019699 - MGP_LPJ_P0030047 Slc2a4 protein_coding nonsense_mediated_decay MGP_LPJ_T0030048.1 MGP_LPJ_G0018476.1 mouse_genomes_project 11 71017112 71019697 - MGP_LPJ_P0030048 Slc2a4 protein_coding protein_coding MGP_LPJ_T0030049.1 MGP_LPJ_G0018476.1 mouse_genomes_project 11 71017618 71019706 - MGP_LPJ_P0030049 Slc2a4 protein_coding protein_coding MGP_LPJ_T0012448.1 MGP_LPJ_G0010539.1 mouse_genomes_project 11 438979 439455 - processed_pseudogene processed_pseudogene MGP_LPJ_T0032116.1 MGP_LPJ_G0018982.1 mouse_genomes_project 11 102006265 102056989 + MGP_LPJ_P0032116 Rara protein_coding protein_coding MGP_LPJ_T0032117.1 MGP_LPJ_G0018982.1 mouse_genomes_project 11 102016150 102056989 + MGP_LPJ_P0032117 Rara protein_coding protein_coding MGP_LPJ_T0032118.1 MGP_LPJ_G0018982.1 mouse_genomes_project 11 102016170 102057753 + MGP_LPJ_P0032118 Rara protein_coding protein_coding MGP_LPJ_T0032119.1 MGP_LPJ_G0018982.1 mouse_genomes_project 11 102016780 102028810 + Rara protein_coding processed_transcript MGP_LPJ_T0032120.1 MGP_LPJ_G0018982.1 mouse_genomes_project 11 102018163 102057753 + MGP_LPJ_P0032120 Rara protein_coding protein_coding MGP_LPJ_T0032121.1 MGP_LPJ_G0018982.1 mouse_genomes_project 11 102018164 102028939 + Rara protein_coding processed_transcript MGP_LPJ_T0032122.1 MGP_LPJ_G0018982.1 mouse_genomes_project 11 102042855 102057753 + MGP_LPJ_P0032122 Rara protein_coding protein_coding MGP_LPJ_T0003221.1 MGP_LPJ_G0002987.1 mouse_genomes_project 11 63540735 63543173 - Tvp23bos antisense antisense MGP_LPJ_T0017205.1 MGP_LPJ_G0015130.1 mouse_genomes_project 11 111665384 111667347 + Gm11650 processed_transcript processed_transcript MGP_LPJ_T0028816.1 MGP_LPJ_G0018166.1 mouse_genomes_project 11 50513474 50516529 - MGP_LPJ_P0028816 4933414I15Rik protein_coding protein_coding MGP_LPJ_T0028817.1 MGP_LPJ_G0018166.1 mouse_genomes_project 11 50514461 50516505 - 4933414I15Rik protein_coding processed_transcript MGP_LPJ_T0028549.1 MGP_LPJ_G0018087.1 mouse_genomes_project 11 42754787 42778873 - MGP_LPJ_P0028549 Ttc1 protein_coding protein_coding MGP_LPJ_T0028550.1 MGP_LPJ_G0018087.1 mouse_genomes_project 11 42755284 42778847 - MGP_LPJ_P0028550 Ttc1 protein_coding protein_coding MGP_LPJ_T0028551.1 MGP_LPJ_G0018087.1 mouse_genomes_project 11 42776095 42778857 - Ttc1 protein_coding processed_transcript MGP_LPJ_T0009739.1 MGP_LPJ_G0007857.1 mouse_genomes_project 11 87783899 87783986 - Mir5110 miRNA miRNA MGP_LPJ_T0006195.1 MGP_LPJ_G0005173.1 mouse_genomes_project 11 12025544 12063293 - 1700046C09Rik lincRNA lincRNA MGP_LPJ_T0032874.1 MGP_LPJ_G0019182.1 mouse_genomes_project 11 108585813 108794139 + MGP_LPJ_P0032874 Efcab3 protein_coding unknown_likely_coding MGP_LPJ_T0032875.1 MGP_LPJ_G0019182.1 mouse_genomes_project 11 108737719 108766620 + MGP_LPJ_P0032875 Efcab3 protein_coding protein_coding MGP_LPJ_T0032876.1 MGP_LPJ_G0019182.1 mouse_genomes_project 11 108740961 108784604 + MGP_LPJ_P0032876 Efcab3 protein_coding protein_coding MGP_LPJ_T0032877.1 MGP_LPJ_G0019182.1 mouse_genomes_project 11 108769749 108794282 + MGP_LPJ_P0032877 Efcab3 protein_coding protein_coding MGP_LPJ_T0032878.1 MGP_LPJ_G0019182.1 mouse_genomes_project 11 108790824 108794280 + Efcab3 protein_coding processed_transcript MGP_LPJ_T0017116.1 MGP_LPJ_G0015075.1 mouse_genomes_project 11 21412996 21413781 - Gm12060 processed_transcript processed_transcript MGP_LPJ_T0097977.1 MGP_LPJ_G0036258.1 mouse_genomes_project 11 74592536 74593486 - pseudogene pseudogene MGP_LPJ_T0027691.1 MGP_LPJ_G0017884.1 mouse_genomes_project 11 1133657 1155601 - MGP_LPJ_P0027691 Sec14l2 protein_coding protein_coding MGP_LPJ_T0027692.1 MGP_LPJ_G0017884.1 mouse_genomes_project 11 1134375 1155466 - Sec14l2 protein_coding processed_transcript MGP_LPJ_T0027693.1 MGP_LPJ_G0017884.1 mouse_genomes_project 11 1134375 1145466 - Sec14l2 protein_coding processed_transcript MGP_LPJ_T0027694.1 MGP_LPJ_G0017884.1 mouse_genomes_project 11 1139749 1145216 - Sec14l2 protein_coding processed_transcript MGP_LPJ_T0027695.1 MGP_LPJ_G0017884.1 mouse_genomes_project 11 1147351 1160185 - Sec14l2 protein_coding processed_transcript MGP_LPJ_T0027696.1 MGP_LPJ_G0017884.1 mouse_genomes_project 11 1153226 1155523 - Sec14l2 protein_coding processed_transcript MGP_LPJ_T0031389.1 MGP_LPJ_G0018803.1 mouse_genomes_project 11 89189629 89205730 + MGP_LPJ_P0031389 Ska2 protein_coding protein_coding MGP_LPJ_T0031390.1 MGP_LPJ_G0018803.1 mouse_genomes_project 11 89189646 89205729 + Ska2 protein_coding processed_transcript MGP_LPJ_T0031391.1 MGP_LPJ_G0018803.1 mouse_genomes_project 11 89196264 89203202 + Ska2 protein_coding processed_transcript MGP_LPJ_T0098476.1 MGP_LPJ_G0036756.1 mouse_genomes_project 11 72011098 72019209 + Gm19967 sense_intronic sense_intronic MGP_LPJ_T0098396.1 MGP_LPJ_G0036677.1 mouse_genomes_project 11 70346294 70346438 - Gm22442 scaRNA scaRNA MGP_LPJ_T0012634.1 MGP_LPJ_G0010725.1 mouse_genomes_project 11 62909804 62910105 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012459.1 MGP_LPJ_G0010550.1 mouse_genomes_project 11 2834211 2834488 - processed_pseudogene processed_pseudogene MGP_LPJ_T0028347.1 MGP_LPJ_G0018033.1 mouse_genomes_project 11 30276751 30337758 + MGP_LPJ_P0028347 Cpeb4 protein_coding protein_coding MGP_LPJ_T0028348.1 MGP_LPJ_G0018033.1 mouse_genomes_project 11 30276766 30341826 + MGP_LPJ_P0028348 Cpeb4 protein_coding protein_coding MGP_LPJ_T0028349.1 MGP_LPJ_G0018033.1 mouse_genomes_project 11 30277816 30341826 + MGP_LPJ_P0028349 Cpeb4 protein_coding protein_coding MGP_LPJ_T0032949.1 MGP_LPJ_G0019200.1 mouse_genomes_project 11 109944868 109977492 + MGP_LPJ_P0032949 Ddx42 protein_coding protein_coding MGP_LPJ_T0032950.1 MGP_LPJ_G0019200.1 mouse_genomes_project 11 109964897 109966393 + Ddx42 protein_coding processed_transcript MGP_LPJ_T0012452.1 MGP_LPJ_G0010543.1 mouse_genomes_project 11 676162 677059 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012655.1 MGP_LPJ_G0010746.1 mouse_genomes_project 11 72027398 72028986 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006313.1 MGP_LPJ_G0005271.1 mouse_genomes_project 11 85127379 85129670 + AI662270 lincRNA lincRNA MGP_LPJ_T0006314.1 MGP_LPJ_G0005271.1 mouse_genomes_project 11 85127379 85130405 + AI662270 lincRNA lincRNA MGP_LPJ_T0006315.1 MGP_LPJ_G0005271.1 mouse_genomes_project 11 85127952 85128394 + AI662270 lincRNA lincRNA MGP_LPJ_T0031198.1 MGP_LPJ_G0018756.1 mouse_genomes_project 11 85465114 85470831 - MGP_LPJ_P0031198 Ccl9 protein_coding protein_coding MGP_LPJ_T0031199.1 MGP_LPJ_G0018756.1 mouse_genomes_project 11 85467512 85469337 - Ccl9 protein_coding processed_transcript MGP_LPJ_T0033981.1 MGP_LPJ_G0019408.1 mouse_genomes_project 11 125236965 125244650 + Hgs protein_coding processed_transcript MGP_LPJ_T0033982.1 MGP_LPJ_G0019408.1 mouse_genomes_project 11 125236965 125254591 + MGP_LPJ_P0033982 Hgs protein_coding protein_coding MGP_LPJ_T0033983.1 MGP_LPJ_G0019408.1 mouse_genomes_project 11 125236965 125246663 + MGP_LPJ_P0033983 Hgs protein_coding protein_coding MGP_LPJ_T0033984.1 MGP_LPJ_G0019408.1 mouse_genomes_project 11 125236965 125254586 + MGP_LPJ_P0033984 Hgs protein_coding protein_coding MGP_LPJ_T0033985.1 MGP_LPJ_G0019408.1 mouse_genomes_project 11 125236965 125254586 + MGP_LPJ_P0033985 Hgs protein_coding protein_coding MGP_LPJ_T0033986.1 MGP_LPJ_G0019408.1 mouse_genomes_project 11 125246845 125249518 + MGP_LPJ_P0033986 Hgs protein_coding protein_coding MGP_LPJ_T0006282.1 MGP_LPJ_G0005248.1 mouse_genomes_project 11 67947531 67955135 - 2310065F04Rik lincRNA lincRNA MGP_LPJ_T0006283.1 MGP_LPJ_G0005248.1 mouse_genomes_project 11 67949078 67951898 - 2310065F04Rik lincRNA lincRNA MGP_LPJ_T0033989.1 MGP_LPJ_G0019410.1 mouse_genomes_project 11 125262446 125269795 + MGP_LPJ_P0033989 Slc25a10 protein_coding protein_coding MGP_LPJ_T0033990.1 MGP_LPJ_G0019410.1 mouse_genomes_project 11 125262494 125269201 + Slc25a10 protein_coding processed_transcript MGP_LPJ_T0033991.1 MGP_LPJ_G0019410.1 mouse_genomes_project 11 125262515 125266521 + Slc25a10 protein_coding processed_transcript MGP_LPJ_T0033992.1 MGP_LPJ_G0019410.1 mouse_genomes_project 11 125262521 125267524 + Slc25a10 protein_coding processed_transcript MGP_LPJ_T0033993.1 MGP_LPJ_G0019410.1 mouse_genomes_project 11 125266706 125268571 + Slc25a10 protein_coding processed_transcript MGP_LPJ_T0033994.1 MGP_LPJ_G0019410.1 mouse_genomes_project 11 125268332 125268885 + Slc25a10 protein_coding processed_transcript MGP_LPJ_T0098116.1 MGP_LPJ_G0036397.1 mouse_genomes_project 11 50370082 50370195 + Gm23392 rRNA rRNA MGP_LPJ_T0030777.1 MGP_LPJ_G0018650.1 mouse_genomes_project 11 78940003 78945737 - MGP_LPJ_P0030777 Ankrd13b protein_coding protein_coding MGP_LPJ_T0030778.1 MGP_LPJ_G0018650.1 mouse_genomes_project 11 78940003 78958964 - MGP_LPJ_P0030778 Ankrd13b protein_coding protein_coding MGP_LPJ_T0030779.1 MGP_LPJ_G0018650.1 mouse_genomes_project 11 78940005 78943144 - Ankrd13b protein_coding retained_intron MGP_LPJ_T0030780.1 MGP_LPJ_G0018650.1 mouse_genomes_project 11 78940005 78958976 - MGP_LPJ_P0030780 Ankrd13b protein_coding protein_coding MGP_LPJ_T0030781.1 MGP_LPJ_G0018650.1 mouse_genomes_project 11 78941633 78946066 - Ankrd13b protein_coding retained_intron MGP_LPJ_T0030782.1 MGP_LPJ_G0018650.1 mouse_genomes_project 11 78942290 78945548 - MGP_LPJ_P0030782 Ankrd13b protein_coding protein_coding MGP_LPJ_T0100137.1 MGP_LPJ_G0038400.1 mouse_genomes_project 11 28133666 28133806 + Gm22588 snoRNA snoRNA MGP_LPJ_T0012476.1 MGP_LPJ_G0010567.1 mouse_genomes_project 11 8704323 8705153 + processed_pseudogene processed_pseudogene MGP_LPJ_T0027568.1 MGP_LPJ_G0017862.1 mouse_genomes_project 11 150544 195849 + MGP_LPJ_P0027568 Eif4enif1 protein_coding protein_coding MGP_LPJ_T0027569.1 MGP_LPJ_G0017862.1 mouse_genomes_project 11 150772 171696 + Eif4enif1 protein_coding retained_intron MGP_LPJ_T0027570.1 MGP_LPJ_G0017862.1 mouse_genomes_project 11 150772 195856 + MGP_LPJ_P0027570 Eif4enif1 protein_coding protein_coding MGP_LPJ_T0027571.1 MGP_LPJ_G0017862.1 mouse_genomes_project 11 150796 161549 + Eif4enif1 protein_coding retained_intron MGP_LPJ_T0027572.1 MGP_LPJ_G0017862.1 mouse_genomes_project 11 150841 169895 + MGP_LPJ_P0027572 Eif4enif1 protein_coding protein_coding MGP_LPJ_T0027573.1 MGP_LPJ_G0017862.1 mouse_genomes_project 11 151102 195853 + MGP_LPJ_P0027573 Eif4enif1 protein_coding protein_coding MGP_LPJ_T0027574.1 MGP_LPJ_G0017862.1 mouse_genomes_project 11 151128 195855 + MGP_LPJ_P0027574 Eif4enif1 protein_coding protein_coding MGP_LPJ_T0027575.1 MGP_LPJ_G0017862.1 mouse_genomes_project 11 151737 195854 + MGP_LPJ_P0027575 Eif4enif1 protein_coding protein_coding MGP_LPJ_T0027576.1 MGP_LPJ_G0017862.1 mouse_genomes_project 11 177132 179374 + Eif4enif1 protein_coding retained_intron MGP_LPJ_T0027577.1 MGP_LPJ_G0017862.1 mouse_genomes_project 11 177132 179337 + Eif4enif1 protein_coding retained_intron MGP_LPJ_T0027578.1 MGP_LPJ_G0017862.1 mouse_genomes_project 11 177178 190728 + MGP_LPJ_P0027578 Eif4enif1 protein_coding protein_coding MGP_LPJ_T0027579.1 MGP_LPJ_G0017862.1 mouse_genomes_project 11 183426 192244 + Eif4enif1 protein_coding retained_intron MGP_LPJ_T0027580.1 MGP_LPJ_G0017862.1 mouse_genomes_project 11 184752 190710 + Eif4enif1 protein_coding retained_intron MGP_LPJ_T0033226.1 MGP_LPJ_G0019260.1 mouse_genomes_project 11 119012211 119062222 + MGP_LPJ_P0033226 Ttyh2 protein_coding protein_coding MGP_LPJ_T0033227.1 MGP_LPJ_G0019260.1 mouse_genomes_project 11 119012296 119031177 + Ttyh2 protein_coding processed_transcript MGP_LPJ_T0011312.1 MGP_LPJ_G0009430.1 mouse_genomes_project 11 18939143 18939411 - Gm22600 misc_RNA misc_RNA MGP_LPJ_T0029277.1 MGP_LPJ_G0018311.1 mouse_genomes_project 11 60014759 60015878 - MGP_LPJ_P0029277 Olfr222 protein_coding protein_coding MGP_LPJ_T0012552.1 MGP_LPJ_G0010643.1 mouse_genomes_project 11 31430932 31431122 + processed_pseudogene processed_pseudogene MGP_LPJ_T0030335.1 MGP_LPJ_G0018529.1 mouse_genomes_project 11 72250461 72348911 - MGP_LPJ_P0030335 Nlrp1a protein_coding protein_coding MGP_LPJ_T0030336.1 MGP_LPJ_G0018529.1 mouse_genomes_project 11 72250461 72303405 - MGP_LPJ_P0030336 Nlrp1a protein_coding protein_coding MGP_LPJ_T0029534.1 MGP_LPJ_G0018360.1 mouse_genomes_project 11 62842448 62857842 - MGP_LPJ_P0029534 Zswim7 protein_coding protein_coding MGP_LPJ_T0029382.1 MGP_LPJ_G0018332.1 mouse_genomes_project 11 61222309 61226863 + MGP_LPJ_P0029382 Mief2 protein_coding protein_coding MGP_LPJ_T0029383.1 MGP_LPJ_G0018332.1 mouse_genomes_project 11 61222354 61224908 + Mief2 protein_coding retained_intron MGP_LPJ_T0029384.1 MGP_LPJ_G0018332.1 mouse_genomes_project 11 61222356 61224575 + Mief2 protein_coding processed_transcript MGP_LPJ_T0028884.1 MGP_LPJ_G0018188.1 mouse_genomes_project 11 51678437 51693336 - MGP_LPJ_P0028884 Ube2b protein_coding protein_coding MGP_LPJ_T0028885.1 MGP_LPJ_G0018188.1 mouse_genomes_project 11 51679607 51693614 - MGP_LPJ_P0028885 Ube2b protein_coding protein_coding MGP_LPJ_T0028886.1 MGP_LPJ_G0018188.1 mouse_genomes_project 11 51690420 51693331 - Ube2b protein_coding processed_transcript MGP_LPJ_T0028887.1 MGP_LPJ_G0018188.1 mouse_genomes_project 11 51690496 51693614 - Ube2b protein_coding processed_transcript MGP_LPJ_T0012751.1 MGP_LPJ_G0010842.1 mouse_genomes_project 11 109589134 109590143 + processed_pseudogene processed_pseudogene MGP_LPJ_T0032158.1 MGP_LPJ_G0018994.1 mouse_genomes_project 11 102495217 102505084 - MGP_LPJ_P0032158 Krt28 protein_coding protein_coding MGP_LPJ_T0017201.1 MGP_LPJ_G0015126.1 mouse_genomes_project 11 108195200 108203682 - Gm22000 processed_transcript processed_transcript MGP_LPJ_T0030733.1 MGP_LPJ_G0018640.1 mouse_genomes_project 11 78098409 78117593 + MGP_LPJ_P0030733 Tusc5 protein_coding protein_coding MGP_LPJ_T0031580.1 MGP_LPJ_G0018850.1 mouse_genomes_project 11 96536798 96544416 - MGP_LPJ_P0031580 Nme2 protein_coding protein_coding MGP_LPJ_T0031581.1 MGP_LPJ_G0018850.1 mouse_genomes_project 11 96536801 96543940 - MGP_LPJ_P0031581 Nme2 protein_coding protein_coding MGP_LPJ_T0012551.1 MGP_LPJ_G0010642.1 mouse_genomes_project 11 31397260 31397840 - processed_pseudogene processed_pseudogene MGP_LPJ_T0028012.1 MGP_LPJ_G0017958.1 mouse_genomes_project 11 9346524 9411833 - MGP_LPJ_P0028012 Grb10 protein_coding protein_coding MGP_LPJ_T0028013.1 MGP_LPJ_G0017958.1 mouse_genomes_project 11 9352695 9354594 - Grb10 protein_coding processed_transcript MGP_LPJ_T0028014.1 MGP_LPJ_G0017958.1 mouse_genomes_project 11 9360873 9362312 - Grb10 protein_coding processed_transcript MGP_LPJ_T0028015.1 MGP_LPJ_G0017958.1 mouse_genomes_project 11 9365581 9372040 - Grb10 protein_coding processed_transcript MGP_LPJ_T0028016.1 MGP_LPJ_G0017958.1 mouse_genomes_project 11 9370764 9462482 - MGP_LPJ_P0028016 Grb10 protein_coding protein_coding MGP_LPJ_T0028017.1 MGP_LPJ_G0017958.1 mouse_genomes_project 11 9383549 9447480 - MGP_LPJ_P0028017 Grb10 protein_coding protein_coding MGP_LPJ_T0028018.1 MGP_LPJ_G0017958.1 mouse_genomes_project 11 9383643 9447909 - MGP_LPJ_P0028018 Grb10 protein_coding protein_coding MGP_LPJ_T0009717.1 MGP_LPJ_G0007835.1 mouse_genomes_project 11 71325279 71325373 + Mir195a miRNA miRNA MGP_LPJ_T0027717.1 MGP_LPJ_G0017889.1 mouse_genomes_project 11 1256498 1260683 + MGP_LPJ_P0027717 Gatsl3 protein_coding protein_coding MGP_LPJ_T0031465.1 MGP_LPJ_G0018818.1 mouse_genomes_project 11 90002627 90015264 - MGP_LPJ_P0031465 Epx protein_coding protein_coding MGP_LPJ_T0031466.1 MGP_LPJ_G0018818.1 mouse_genomes_project 11 90009129 90011532 - Epx protein_coding processed_transcript MGP_LPJ_T0006239.1 MGP_LPJ_G0005210.1 mouse_genomes_project 11 36383407 36397608 + Gm12128 lincRNA lincRNA MGP_LPJ_T0028374.1 MGP_LPJ_G0018040.1 mouse_genomes_project 11 30659617 30665135 + MGP_LPJ_P0028374 Mpg protein_coding nonsense_mediated_decay MGP_LPJ_T0028375.1 MGP_LPJ_G0018040.1 mouse_genomes_project 11 30659623 30665813 + MGP_LPJ_P0028375 Mpg protein_coding protein_coding MGP_LPJ_T0028376.1 MGP_LPJ_G0018040.1 mouse_genomes_project 11 30659642 30661510 + Mpg protein_coding retained_intron MGP_LPJ_T0028377.1 MGP_LPJ_G0018040.1 mouse_genomes_project 11 30659651 30664357 + MGP_LPJ_P0028377 Mpg protein_coding nonsense_mediated_decay MGP_LPJ_T0030499.1 MGP_LPJ_G0018583.1 mouse_genomes_project 11 75175459 75176550 + MGP_LPJ_P0030499 Olfr397 protein_coding protein_coding MGP_LPJ_T0029645.1 MGP_LPJ_G0018385.1 mouse_genomes_project 11 66420796 66529633 - MGP_LPJ_P0029645 Map2k4 protein_coding protein_coding MGP_LPJ_T0029646.1 MGP_LPJ_G0018385.1 mouse_genomes_project 11 66422886 66452041 - MGP_LPJ_P0029646 Map2k4 protein_coding protein_coding MGP_LPJ_T0029647.1 MGP_LPJ_G0018385.1 mouse_genomes_project 11 66424281 66429559 - Map2k4 protein_coding processed_transcript MGP_LPJ_T0029648.1 MGP_LPJ_G0018385.1 mouse_genomes_project 11 66428832 66529621 - MGP_LPJ_P0029648 Map2k4 protein_coding nonsense_mediated_decay MGP_LPJ_T0029649.1 MGP_LPJ_G0018385.1 mouse_genomes_project 11 66444662 66529622 - MGP_LPJ_P0029649 Map2k4 protein_coding protein_coding MGP_LPJ_T0029650.1 MGP_LPJ_G0018385.1 mouse_genomes_project 11 66444663 66529621 - MGP_LPJ_P0029650 Map2k4 protein_coding nonsense_mediated_decay MGP_LPJ_T0029651.1 MGP_LPJ_G0018385.1 mouse_genomes_project 11 66451976 66479411 - Map2k4 protein_coding processed_transcript MGP_LPJ_T0012539.1 MGP_LPJ_G0010630.1 mouse_genomes_project 11 28123473 28123945 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006286.1 MGP_LPJ_G0005251.1 mouse_genomes_project 11 71883004 71890310 - Gm12320 lincRNA lincRNA MGP_LPJ_T0098698.1 MGP_LPJ_G0036965.1 mouse_genomes_project 11 101290253 101292301 + Gm20644 sense_overlapping sense_overlapping MGP_LPJ_T0031956.1 MGP_LPJ_G0018946.1 mouse_genomes_project 11 100771021 100778873 + MGP_LPJ_P0031956 Lasp1 protein_coding protein_coding MGP_LPJ_T0031957.1 MGP_LPJ_G0018946.1 mouse_genomes_project 11 100771204 100813074 + MGP_LPJ_P0031957 Lasp1 protein_coding protein_coding MGP_LPJ_T0031958.1 MGP_LPJ_G0018946.1 mouse_genomes_project 11 100771693 100779353 + Lasp1 protein_coding retained_intron MGP_LPJ_T0031959.1 MGP_LPJ_G0018946.1 mouse_genomes_project 11 100771859 100807915 + MGP_LPJ_P0031959 Lasp1 protein_coding protein_coding MGP_LPJ_T0031960.1 MGP_LPJ_G0018946.1 mouse_genomes_project 11 100772019 100807903 + MGP_LPJ_P0031960 Lasp1 protein_coding protein_coding MGP_LPJ_T0031961.1 MGP_LPJ_G0018946.1 mouse_genomes_project 11 100772192 100807871 + MGP_LPJ_P0031961 Lasp1 protein_coding protein_coding MGP_LPJ_T0031962.1 MGP_LPJ_G0018946.1 mouse_genomes_project 11 100772318 100797679 + MGP_LPJ_P0031962 Lasp1 protein_coding protein_coding MGP_LPJ_T0031963.1 MGP_LPJ_G0018946.1 mouse_genomes_project 11 100772324 100778953 + MGP_LPJ_P0031963 Lasp1 protein_coding protein_coding MGP_LPJ_T0031964.1 MGP_LPJ_G0018946.1 mouse_genomes_project 11 100774019 100797681 + MGP_LPJ_P0031964 Lasp1 protein_coding protein_coding MGP_LPJ_T0031965.1 MGP_LPJ_G0018946.1 mouse_genomes_project 11 100777225 100810427 + MGP_LPJ_P0031965 Lasp1 protein_coding protein_coding MGP_LPJ_T0031966.1 MGP_LPJ_G0018946.1 mouse_genomes_project 11 100778343 100778934 + MGP_LPJ_P0031966 Lasp1 protein_coding protein_coding MGP_LPJ_T0031967.1 MGP_LPJ_G0018946.1 mouse_genomes_project 11 100778535 100788553 + MGP_LPJ_P0031967 Lasp1 protein_coding protein_coding MGP_LPJ_T0031968.1 MGP_LPJ_G0018946.1 mouse_genomes_project 11 100788018 100797720 + MGP_LPJ_P0031968 Lasp1 protein_coding protein_coding MGP_LPJ_T0031969.1 MGP_LPJ_G0018946.1 mouse_genomes_project 11 100807503 100810513 + Lasp1 protein_coding retained_intron MGP_LPJ_T0031970.1 MGP_LPJ_G0018946.1 mouse_genomes_project 11 100807731 100808692 + Lasp1 protein_coding retained_intron MGP_LPJ_T0031094.1 MGP_LPJ_G0018721.1 mouse_genomes_project 11 82590561 83734880 - MGP_LPJ_P0031094 Asic2 protein_coding protein_coding MGP_LPJ_T0031095.1 MGP_LPJ_G0018721.1 mouse_genomes_project 11 82590561 82884232 - MGP_LPJ_P0031095 Asic2 protein_coding protein_coding MGP_LPJ_T0012704.1 MGP_LPJ_G0010795.1 mouse_genomes_project 11 90562416 90562741 + processed_pseudogene processed_pseudogene MGP_LPJ_T0031975.1 MGP_LPJ_G0018948.1 mouse_genomes_project 11 100828920 100830647 - Fbxo47 protein_coding retained_intron MGP_LPJ_T0031976.1 MGP_LPJ_G0018948.1 mouse_genomes_project 11 100828920 100861447 - MGP_LPJ_P0031976 Fbxo47 protein_coding protein_coding MGP_LPJ_T0006198.1 MGP_LPJ_G0005176.1 mouse_genomes_project 11 16193738 16297396 - Gm12023 lincRNA lincRNA MGP_LPJ_T0029777.1 MGP_LPJ_G0018418.1 mouse_genomes_project 11 69945902 69950031 - protein_coding processed_transcript MGP_LPJ_T0012734.1 MGP_LPJ_G0010825.1 mouse_genomes_project 11 104885797 104886093 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011309.1 MGP_LPJ_G0009427.1 mouse_genomes_project 11 623460 623548 - Gm27937 misc_RNA misc_RNA MGP_LPJ_T0033718.1 MGP_LPJ_G0019353.1 mouse_genomes_project 11 122403947 122413960 + MGP_LPJ_P0033718 6030468B19Rik protein_coding protein_coding MGP_LPJ_T0030413.1 MGP_LPJ_G0018550.1 mouse_genomes_project 11 73929635 73950015 - MGP_LPJ_P0030413 Cyb5d2 protein_coding protein_coding MGP_LPJ_T0030414.1 MGP_LPJ_G0018550.1 mouse_genomes_project 11 73931148 73949861 - MGP_LPJ_P0030414 Cyb5d2 protein_coding protein_coding MGP_LPJ_T0030415.1 MGP_LPJ_G0018550.1 mouse_genomes_project 11 73931287 73950257 - Cyb5d2 protein_coding processed_transcript MGP_LPJ_T0030416.1 MGP_LPJ_G0018550.1 mouse_genomes_project 11 73947047 73950000 - Cyb5d2 protein_coding retained_intron MGP_LPJ_T0012533.1 MGP_LPJ_G0010624.1 mouse_genomes_project 11 27214129 27214972 + processed_pseudogene processed_pseudogene MGP_LPJ_T0028945.1 MGP_LPJ_G0018204.1 mouse_genomes_project 11 53294175 53304725 + MGP_LPJ_P0028945 Shroom1 protein_coding protein_coding MGP_LPJ_T0028946.1 MGP_LPJ_G0018204.1 mouse_genomes_project 11 53294200 53304257 + MGP_LPJ_P0028946 Shroom1 protein_coding protein_coding MGP_LPJ_T0028947.1 MGP_LPJ_G0018204.1 mouse_genomes_project 11 53294216 53304714 + Shroom1 protein_coding retained_intron MGP_LPJ_T0028948.1 MGP_LPJ_G0018204.1 mouse_genomes_project 11 53294219 53304460 + Shroom1 protein_coding retained_intron MGP_LPJ_T0028949.1 MGP_LPJ_G0018204.1 mouse_genomes_project 11 53294249 53304261 + MGP_LPJ_P0028949 Shroom1 protein_coding protein_coding MGP_LPJ_T0028950.1 MGP_LPJ_G0018204.1 mouse_genomes_project 11 53302454 53302812 + Shroom1 protein_coding processed_transcript MGP_LPJ_T0012622.1 MGP_LPJ_G0010713.1 mouse_genomes_project 11 60021829 60022474 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098953.1 MGP_LPJ_G0037216.1 mouse_genomes_project 11 110546913 110547020 - Gm25889 snRNA snRNA MGP_LPJ_T0031790.1 MGP_LPJ_G0018903.1 mouse_genomes_project 11 98968056 99004746 + MGP_LPJ_P0031790 Ttll6 protein_coding protein_coding MGP_LPJ_T0031791.1 MGP_LPJ_G0018903.1 mouse_genomes_project 11 98968489 99004746 + MGP_LPJ_P0031791 Ttll6 protein_coding protein_coding MGP_LPJ_T0034167.1 MGP_LPJ_G0019446.1 mouse_genomes_project 11 126037803 126044519 - MGP_LPJ_P0034167 BC017643 protein_coding protein_coding MGP_LPJ_T0034168.1 MGP_LPJ_G0019446.1 mouse_genomes_project 11 126037803 126044515 - MGP_LPJ_P0034168 BC017643 protein_coding protein_coding MGP_LPJ_T0034169.1 MGP_LPJ_G0019446.1 mouse_genomes_project 11 126038879 126043996 - BC017643 protein_coding retained_intron MGP_LPJ_T0034170.1 MGP_LPJ_G0019446.1 mouse_genomes_project 11 126039162 126042592 - BC017643 protein_coding retained_intron MGP_LPJ_T0034171.1 MGP_LPJ_G0019446.1 mouse_genomes_project 11 126039441 126044305 - MGP_LPJ_P0034171 BC017643 protein_coding protein_coding MGP_LPJ_T0034172.1 MGP_LPJ_G0019446.1 mouse_genomes_project 11 126039785 126044445 - MGP_LPJ_P0034172 BC017643 protein_coding protein_coding MGP_LPJ_T0034173.1 MGP_LPJ_G0019446.1 mouse_genomes_project 11 126039812 126044532 - MGP_LPJ_P0034173 BC017643 protein_coding protein_coding MGP_LPJ_T0034174.1 MGP_LPJ_G0019446.1 mouse_genomes_project 11 126041980 126044433 - BC017643 protein_coding processed_transcript MGP_LPJ_T0030489.1 MGP_LPJ_G0018576.1 mouse_genomes_project 11 74988283 75133937 + MGP_LPJ_P0030489 protein_coding protein_coding MGP_LPJ_T0030490.1 MGP_LPJ_G0018576.1 mouse_genomes_project 11 74988301 75133468 + MGP_LPJ_P0030490 protein_coding protein_coding MGP_LPJ_T0030497.1 MGP_LPJ_G0018576.1 mouse_genomes_project 11 75132998 75133937 + MGP_LPJ_P0030497 protein_coding protein_coding MGP_LPJ_T0031525.1 MGP_LPJ_G0018838.1 mouse_genomes_project 11 91706072 91840531 - MGP_LPJ_P0031525 protein_coding unknown_likely_coding MGP_LPJ_T0031526.1 MGP_LPJ_G0018838.1 mouse_genomes_project 11 91735582 91951735 - MGP_LPJ_P0031526 protein_coding protein_coding MGP_LPJ_T0031527.1 MGP_LPJ_G0018838.1 mouse_genomes_project 11 91735681 91852466 - MGP_LPJ_P0031527 protein_coding protein_coding MGP_LPJ_T0009686.1 MGP_LPJ_G0007804.1 mouse_genomes_project 11 49252922 49252999 + Gm23813 miRNA miRNA MGP_LPJ_T0033269.1 MGP_LPJ_G0019271.1 mouse_genomes_project 11 119373009 119378539 - MGP_LPJ_P0033269 Cd300c2 protein_coding protein_coding MGP_LPJ_T0033270.1 MGP_LPJ_G0019271.1 mouse_genomes_project 11 119373010 119378539 - MGP_LPJ_P0033270 Cd300c2 protein_coding nonsense_mediated_decay MGP_LPJ_T0029947.1 MGP_LPJ_G0018454.1 mouse_genomes_project 11 70710420 70713129 - MGP_LPJ_P0029947 Tnfsf13 protein_coding protein_coding MGP_LPJ_T0029948.1 MGP_LPJ_G0018454.1 mouse_genomes_project 11 70710506 70713359 - MGP_LPJ_P0029948 Tnfsf13 protein_coding protein_coding MGP_LPJ_T0003146.1 MGP_LPJ_G0002922.1 mouse_genomes_project 11 14364840 14380113 - Egfros antisense antisense MGP_LPJ_T0028672.1 MGP_LPJ_G0018128.1 mouse_genomes_project 11 48541111 48542050 + MGP_LPJ_P0028672 Olfr1394 protein_coding protein_coding MGP_LPJ_T0012693.1 MGP_LPJ_G0010784.1 mouse_genomes_project 11 87055939 87056466 - processed_pseudogene processed_pseudogene MGP_LPJ_T0031286.1 MGP_LPJ_G0018779.1 mouse_genomes_project 11 86891855 86897426 - MGP_LPJ_P0031286 Znhit3 protein_coding protein_coding MGP_LPJ_T0031287.1 MGP_LPJ_G0018779.1 mouse_genomes_project 11 86892196 86897409 - Znhit3 protein_coding processed_transcript MGP_LPJ_T0031288.1 MGP_LPJ_G0018779.1 mouse_genomes_project 11 86892374 86897426 - Znhit3 protein_coding processed_transcript MGP_LPJ_T0031289.1 MGP_LPJ_G0018779.1 mouse_genomes_project 11 86892410 86897365 - Znhit3 protein_coding processed_transcript MGP_LPJ_T0031290.1 MGP_LPJ_G0018779.1 mouse_genomes_project 11 86896498 86897384 - Znhit3 protein_coding retained_intron MGP_LPJ_T0003279.1 MGP_LPJ_G0003033.1 mouse_genomes_project 11 91173561 91200267 + Scpep1os antisense antisense MGP_LPJ_T0012731.1 MGP_LPJ_G0010822.1 mouse_genomes_project 11 103250604 103251063 - processed_pseudogene processed_pseudogene MGP_LPJ_T0032175.1 MGP_LPJ_G0019009.1 mouse_genomes_project 11 102751116 102753109 - MGP_LPJ_P0032175 Gm11938 protein_coding protein_coding MGP_LPJ_T0033486.1 MGP_LPJ_G0019311.1 mouse_genomes_project 11 120467971 120473821 - MGP_LPJ_P0033486 Galk1 protein_coding protein_coding MGP_LPJ_T0032230.1 MGP_LPJ_G0019052.1 mouse_genomes_project 11 103647830 103657224 - MGP_LPJ_P0032230 Hap1 protein_coding protein_coding MGP_LPJ_T0032231.1 MGP_LPJ_G0019052.1 mouse_genomes_project 11 103649359 103657183 - MGP_LPJ_P0032231 Hap1 protein_coding protein_coding MGP_LPJ_T0032232.1 MGP_LPJ_G0019052.1 mouse_genomes_project 11 103649798 103655136 - MGP_LPJ_P0032232 Hap1 protein_coding protein_coding MGP_LPJ_T0032233.1 MGP_LPJ_G0019052.1 mouse_genomes_project 11 103649918 103653002 - MGP_LPJ_P0032233 Hap1 protein_coding protein_coding MGP_LPJ_T0032234.1 MGP_LPJ_G0019052.1 mouse_genomes_project 11 103653352 103656479 - MGP_LPJ_P0032234 Hap1 protein_coding protein_coding MGP_LPJ_T0029309.1 MGP_LPJ_G0018319.1 mouse_genomes_project 11 60424000 60426797 - MGP_LPJ_P0029309 Rasd1 protein_coding protein_coding MGP_LPJ_T0012498.1 MGP_LPJ_G0010589.1 mouse_genomes_project 11 17341986 17343104 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009777.1 MGP_LPJ_G0007895.1 mouse_genomes_project 11 119855892 119855992 - Mir3968 miRNA miRNA MGP_LPJ_T0012506.1 MGP_LPJ_G0010597.1 mouse_genomes_project 11 18568901 18569108 - processed_pseudogene processed_pseudogene MGP_LPJ_T0031006.1 MGP_LPJ_G0018700.1 mouse_genomes_project 11 81115626 81118715 - MGP_LPJ_P0031006 Omg protein_coding protein_coding MGP_LPJ_T0033795.1 MGP_LPJ_G0019372.1 mouse_genomes_project 11 123137533 123569940 - MGP_LPJ_P0033795 Rbfox3 protein_coding protein_coding MGP_LPJ_T0033796.1 MGP_LPJ_G0019372.1 mouse_genomes_project 11 123137535 123417256 - MGP_LPJ_P0033796 Rbfox3 protein_coding protein_coding MGP_LPJ_T0033797.1 MGP_LPJ_G0019372.1 mouse_genomes_project 11 123138926 123571955 - MGP_LPJ_P0033797 Rbfox3 protein_coding protein_coding MGP_LPJ_T0033798.1 MGP_LPJ_G0019372.1 mouse_genomes_project 11 123138926 123569952 - MGP_LPJ_P0033798 Rbfox3 protein_coding protein_coding MGP_LPJ_T0033799.1 MGP_LPJ_G0019372.1 mouse_genomes_project 11 123138974 123569940 - MGP_LPJ_P0033799 Rbfox3 protein_coding protein_coding MGP_LPJ_T0033800.1 MGP_LPJ_G0019372.1 mouse_genomes_project 11 123139765 123569942 - MGP_LPJ_P0033800 Rbfox3 protein_coding protein_coding MGP_LPJ_T0033801.1 MGP_LPJ_G0019372.1 mouse_genomes_project 11 123144272 123155185 - MGP_LPJ_P0033801 Rbfox3 protein_coding protein_coding MGP_LPJ_T0033802.1 MGP_LPJ_G0019372.1 mouse_genomes_project 11 123150673 123219857 - MGP_LPJ_P0033802 Rbfox3 protein_coding protein_coding MGP_LPJ_T0033803.1 MGP_LPJ_G0019372.1 mouse_genomes_project 11 123469398 123549091 - Rbfox3 protein_coding processed_transcript MGP_LPJ_T0033804.1 MGP_LPJ_G0019372.1 mouse_genomes_project 11 123469400 123568395 - Rbfox3 protein_coding processed_transcript MGP_LPJ_T0033491.1 MGP_LPJ_G0019313.1 mouse_genomes_project 11 120493501 120525572 + MGP_LPJ_P0033491 Unk protein_coding protein_coding MGP_LPJ_T0033492.1 MGP_LPJ_G0019313.1 mouse_genomes_project 11 120493501 120525572 + MGP_LPJ_P0033492 Unk protein_coding protein_coding MGP_LPJ_T0033493.1 MGP_LPJ_G0019313.1 mouse_genomes_project 11 120493502 120504648 + Unk protein_coding processed_transcript MGP_LPJ_T0033494.1 MGP_LPJ_G0019313.1 mouse_genomes_project 11 120493513 120525582 + MGP_LPJ_P0033494 Unk protein_coding unknown_likely_coding MGP_LPJ_T0033495.1 MGP_LPJ_G0019313.1 mouse_genomes_project 11 120502273 120525572 + Unk protein_coding processed_transcript MGP_LPJ_T0033496.1 MGP_LPJ_G0019313.1 mouse_genomes_project 11 120512813 120517198 + Unk protein_coding retained_intron MGP_LPJ_T0033497.1 MGP_LPJ_G0019313.1 mouse_genomes_project 11 120516815 120520399 + Unk protein_coding retained_intron MGP_LPJ_T0033498.1 MGP_LPJ_G0019313.1 mouse_genomes_project 11 120520229 120523415 + Unk protein_coding retained_intron MGP_LPJ_T0031161.1 MGP_LPJ_G0018745.1 mouse_genomes_project 11 85041904 85119498 + MGP_LPJ_P0031161 Slfn3 protein_coding protein_coding MGP_LPJ_T0006261.1 MGP_LPJ_G0005230.1 mouse_genomes_project 11 54094093 54130843 - 4933405E24Rik lincRNA lincRNA MGP_LPJ_T0012612.1 MGP_LPJ_G0010703.1 mouse_genomes_project 11 58131743 58132100 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009768.1 MGP_LPJ_G0007886.1 mouse_genomes_project 11 107862189 107862260 - miRNA miRNA MGP_LPJ_T0030134.1 MGP_LPJ_G0018491.1 mouse_genomes_project 11 71314366 71319978 - MGP_LPJ_P0030134 Bcl6b protein_coding protein_coding MGP_LPJ_T0030135.1 MGP_LPJ_G0018491.1 mouse_genomes_project 11 71318778 71319916 - MGP_LPJ_P0030135 Bcl6b protein_coding protein_coding MGP_LPJ_T0030136.1 MGP_LPJ_G0018491.1 mouse_genomes_project 11 71318847 71320037 - Bcl6b protein_coding retained_intron MGP_LPJ_T0028737.1 MGP_LPJ_G0018148.1 mouse_genomes_project 11 49514026 49597971 + MGP_LPJ_P0028737 Rnf130 protein_coding protein_coding MGP_LPJ_T0028738.1 MGP_LPJ_G0018148.1 mouse_genomes_project 11 49586922 49598165 + Rnf130 protein_coding processed_transcript MGP_LPJ_T0028717.1 MGP_LPJ_G0018144.1 mouse_genomes_project 11 49140730 49188560 - MGP_LPJ_P0028717 Cnot6 protein_coding protein_coding MGP_LPJ_T0028718.1 MGP_LPJ_G0018144.1 mouse_genomes_project 11 49143925 49178126 - Cnot6 protein_coding processed_transcript MGP_LPJ_T0028719.1 MGP_LPJ_G0018144.1 mouse_genomes_project 11 49143940 49188547 - MGP_LPJ_P0028719 Cnot6 protein_coding protein_coding MGP_LPJ_T0028720.1 MGP_LPJ_G0018144.1 mouse_genomes_project 11 49146597 49150666 - Cnot6 protein_coding processed_transcript MGP_LPJ_T0028721.1 MGP_LPJ_G0018144.1 mouse_genomes_project 11 49151417 49152990 - Cnot6 protein_coding processed_transcript MGP_LPJ_T0031396.1 MGP_LPJ_G0018805.1 mouse_genomes_project 11 89315539 89450648 - MGP_LPJ_P0031396 Ppm1e protein_coding protein_coding MGP_LPJ_T0031397.1 MGP_LPJ_G0018805.1 mouse_genomes_project 11 89332775 89450262 - Ppm1e protein_coding processed_transcript MGP_LPJ_T0017134.1 MGP_LPJ_G0015088.1 mouse_genomes_project 11 59945657 59953641 + 4933439C10Rik processed_transcript processed_transcript MGP_LPJ_T0017135.1 MGP_LPJ_G0015088.1 mouse_genomes_project 11 59945680 59951066 + 4933439C10Rik processed_transcript processed_transcript MGP_LPJ_T0017136.1 MGP_LPJ_G0015088.1 mouse_genomes_project 11 59946089 59946845 + 4933439C10Rik processed_transcript processed_transcript MGP_LPJ_T0017137.1 MGP_LPJ_G0015088.1 mouse_genomes_project 11 59946145 59950096 + 4933439C10Rik processed_transcript processed_transcript MGP_LPJ_T0017138.1 MGP_LPJ_G0015088.1 mouse_genomes_project 11 59946660 59950148 + 4933439C10Rik processed_transcript processed_transcript MGP_LPJ_T0017139.1 MGP_LPJ_G0015088.1 mouse_genomes_project 11 59947633 59951066 + 4933439C10Rik processed_transcript processed_transcript MGP_LPJ_T0031471.1 MGP_LPJ_G0018822.1 mouse_genomes_project 11 90160332 90167372 - MGP_LPJ_P0031471 Dynll2 protein_coding protein_coding MGP_LPJ_T0031472.1 MGP_LPJ_G0018822.1 mouse_genomes_project 11 90160333 90168320 - MGP_LPJ_P0031472 Dynll2 protein_coding protein_coding MGP_LPJ_T0031473.1 MGP_LPJ_G0018822.1 mouse_genomes_project 11 90160333 90164814 - MGP_LPJ_P0031473 Dynll2 protein_coding protein_coding MGP_LPJ_T0031474.1 MGP_LPJ_G0018822.1 mouse_genomes_project 11 90160965 90168143 - MGP_LPJ_P0031474 Dynll2 protein_coding nonsense_mediated_decay MGP_LPJ_T0028541.1 MGP_LPJ_G0018084.1 mouse_genomes_project 11 42607651 42609639 + MGP_LPJ_P0028541 4933415A04Rik protein_coding protein_coding MGP_LPJ_T0027673.1 MGP_LPJ_G0017880.1 mouse_genomes_project 11 992724 1008138 + MGP_LPJ_P0027673 Gal3st1 protein_coding protein_coding MGP_LPJ_T0027674.1 MGP_LPJ_G0017880.1 mouse_genomes_project 11 992801 1008127 + MGP_LPJ_P0027674 Gal3st1 protein_coding protein_coding MGP_LPJ_T0027675.1 MGP_LPJ_G0017880.1 mouse_genomes_project 11 999014 1008120 + MGP_LPJ_P0027675 Gal3st1 protein_coding protein_coding MGP_LPJ_T0003373.1 MGP_LPJ_G0003109.1 mouse_genomes_project 11 124554574 124568131 - Rptoros antisense antisense MGP_LPJ_T0028414.1 MGP_LPJ_G0018051.1 mouse_genomes_project 11 31695335 31706368 - MGP_LPJ_P0028414 Npm1 protein_coding protein_coding MGP_LPJ_T0028415.1 MGP_LPJ_G0018051.1 mouse_genomes_project 11 31695558 31706234 - MGP_LPJ_P0028415 Npm1 protein_coding protein_coding MGP_LPJ_T0028416.1 MGP_LPJ_G0018051.1 mouse_genomes_project 11 31695559 31697514 - Npm1 protein_coding processed_transcript MGP_LPJ_T0028417.1 MGP_LPJ_G0018051.1 mouse_genomes_project 11 31697975 31706239 - MGP_LPJ_P0028417 Npm1 protein_coding protein_coding MGP_LPJ_T0028418.1 MGP_LPJ_G0018051.1 mouse_genomes_project 11 31698376 31706238 - MGP_LPJ_P0028418 Npm1 protein_coding protein_coding MGP_LPJ_T0028419.1 MGP_LPJ_G0018051.1 mouse_genomes_project 11 31699189 31700441 - Npm1 protein_coding processed_transcript MGP_LPJ_T0032758.1 MGP_LPJ_G0019156.1 mouse_genomes_project 11 106658447 106669726 + MGP_LPJ_P0032758 Acbd4 protein_coding protein_coding MGP_LPJ_T0032759.1 MGP_LPJ_G0019156.1 mouse_genomes_project 11 106658447 106669729 + MGP_LPJ_P0032759 Acbd4 protein_coding nonsense_mediated_decay MGP_LPJ_T0032760.1 MGP_LPJ_G0019156.1 mouse_genomes_project 11 106658451 106660787 + Acbd4 protein_coding processed_transcript MGP_LPJ_T0032761.1 MGP_LPJ_G0019156.1 mouse_genomes_project 11 106658451 106662163 + MGP_LPJ_P0032761 Acbd4 protein_coding protein_coding MGP_LPJ_T0032762.1 MGP_LPJ_G0019156.1 mouse_genomes_project 11 106658453 106669728 + MGP_LPJ_P0032762 Acbd4 protein_coding protein_coding MGP_LPJ_T0032763.1 MGP_LPJ_G0019156.1 mouse_genomes_project 11 106658474 106660151 + Acbd4 protein_coding retained_intron MGP_LPJ_T0032764.1 MGP_LPJ_G0019156.1 mouse_genomes_project 11 106658477 106660945 + MGP_LPJ_P0032764 Acbd4 protein_coding protein_coding MGP_LPJ_T0032765.1 MGP_LPJ_G0019156.1 mouse_genomes_project 11 106658491 106659989 + Acbd4 protein_coding retained_intron MGP_LPJ_T0032766.1 MGP_LPJ_G0019156.1 mouse_genomes_project 11 106659786 106662237 + MGP_LPJ_P0032766 Acbd4 protein_coding nonsense_mediated_decay MGP_LPJ_T0032767.1 MGP_LPJ_G0019156.1 mouse_genomes_project 11 106659839 106662222 + Acbd4 protein_coding processed_transcript MGP_LPJ_T0032768.1 MGP_LPJ_G0019156.1 mouse_genomes_project 11 106659841 106661617 + MGP_LPJ_P0032768 Acbd4 protein_coding protein_coding MGP_LPJ_T0032769.1 MGP_LPJ_G0019156.1 mouse_genomes_project 11 106659873 106660864 + Acbd4 protein_coding retained_intron MGP_LPJ_T0032770.1 MGP_LPJ_G0019156.1 mouse_genomes_project 11 106660017 106661253 + Acbd4 protein_coding retained_intron MGP_LPJ_T0032771.1 MGP_LPJ_G0019156.1 mouse_genomes_project 11 106661475 106669482 + Acbd4 protein_coding retained_intron MGP_LPJ_T0032772.1 MGP_LPJ_G0019156.1 mouse_genomes_project 11 106662953 106669268 + Acbd4 protein_coding processed_transcript MGP_LPJ_T0032773.1 MGP_LPJ_G0019156.1 mouse_genomes_project 11 106662974 106669726 + Acbd4 protein_coding processed_transcript MGP_LPJ_T0017229.1 MGP_LPJ_G0015137.1 mouse_genomes_project 11 124899165 124900947 + Gm11769 processed_transcript processed_transcript MGP_LPJ_T0006320.1 MGP_LPJ_G0005274.1 mouse_genomes_project 11 86689995 86693432 - 1700109G15Rik lincRNA lincRNA MGP_LPJ_T0028906.1 MGP_LPJ_G0018191.1 mouse_genomes_project 11 51929604 51933541 - MGP_LPJ_P0028906 protein_coding protein_coding MGP_LPJ_T0006341.1 MGP_LPJ_G0005289.1 mouse_genomes_project 11 98404360 98411537 + Gm11528 lincRNA lincRNA MGP_LPJ_T0101765.1 MGP_LPJ_G0039803.1 mouse_genomes_project 11 58726166 58727106 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0011332.1 MGP_LPJ_G0009450.1 mouse_genomes_project 11 111699261 111699548 + Gm23120 misc_RNA misc_RNA MGP_LPJ_T0030859.1 MGP_LPJ_G0018665.1 mouse_genomes_project 11 79579697 79589220 - Eral1 protein_coding retained_intron MGP_LPJ_T0030860.1 MGP_LPJ_G0018665.1 mouse_genomes_project 11 79579697 79589220 - MGP_LPJ_P0030860 Eral1 protein_coding protein_coding MGP_LPJ_T0030861.1 MGP_LPJ_G0018665.1 mouse_genomes_project 11 79580852 79582293 - Eral1 protein_coding retained_intron MGP_LPJ_T0029624.1 MGP_LPJ_G0018379.1 mouse_genomes_project 11 65132077 65133575 - MGP_LPJ_P0029624 F930015N05Rik protein_coding protein_coding MGP_LPJ_T0012750.1 MGP_LPJ_G0010841.1 mouse_genomes_project 11 109483684 109484951 + processed_pseudogene processed_pseudogene MGP_LPJ_T0034095.1 MGP_LPJ_G0019430.1 mouse_genomes_project 11 125517630 125520464 - MGP_LPJ_P0034095 Cbr2 protein_coding protein_coding MGP_LPJ_T0034096.1 MGP_LPJ_G0019430.1 mouse_genomes_project 11 125517645 125518258 - Cbr2 protein_coding retained_intron MGP_LPJ_T0034097.1 MGP_LPJ_G0019430.1 mouse_genomes_project 11 125517920 125520294 - MGP_LPJ_P0034097 Cbr2 protein_coding protein_coding MGP_LPJ_T0034098.1 MGP_LPJ_G0019430.1 mouse_genomes_project 11 125518265 125520302 - Cbr2 protein_coding retained_intron MGP_LPJ_T0032190.1 MGP_LPJ_G0019024.1 mouse_genomes_project 11 103047267 103049421 - MGP_LPJ_P0032190 protein_coding protein_coding MGP_LPJ_T0031241.1 MGP_LPJ_G0018770.1 mouse_genomes_project 11 86063147 86155010 + MGP_LPJ_P0031241 Acaca protein_coding protein_coding MGP_LPJ_T0031242.1 MGP_LPJ_G0018770.1 mouse_genomes_project 11 86063175 86066578 + Acaca protein_coding processed_transcript MGP_LPJ_T0031244.1 MGP_LPJ_G0018770.1 mouse_genomes_project 11 86112207 86349851 + MGP_LPJ_P0031244 Acaca protein_coding protein_coding MGP_LPJ_T0031245.1 MGP_LPJ_G0018770.1 mouse_genomes_project 11 86112439 86176977 + Acaca protein_coding retained_intron MGP_LPJ_T0031246.1 MGP_LPJ_G0018770.1 mouse_genomes_project 11 86118976 86154915 + MGP_LPJ_P0031246 Acaca protein_coding protein_coding MGP_LPJ_T0031247.1 MGP_LPJ_G0018770.1 mouse_genomes_project 11 86118976 86173098 + MGP_LPJ_P0031247 Acaca protein_coding protein_coding MGP_LPJ_T0031248.1 MGP_LPJ_G0018770.1 mouse_genomes_project 11 86119003 86154904 + MGP_LPJ_P0031248 Acaca protein_coding protein_coding MGP_LPJ_T0031249.1 MGP_LPJ_G0018770.1 mouse_genomes_project 11 86134226 86349845 + MGP_LPJ_P0031249 Acaca protein_coding protein_coding MGP_LPJ_T0031250.1 MGP_LPJ_G0018770.1 mouse_genomes_project 11 86223802 86256764 + MGP_LPJ_P0031250 Acaca protein_coding protein_coding MGP_LPJ_T0003166.1 MGP_LPJ_G0002939.1 mouse_genomes_project 11 42263402 42312015 - Gm12147 antisense antisense MGP_LPJ_T0009780.1 MGP_LPJ_G0007898.1 mouse_genomes_project 11 121622476 121622553 + Gm24323 miRNA miRNA MGP_LPJ_T0029393.1 MGP_LPJ_G0018334.1 mouse_genomes_project 11 61273619 61277164 + MGP_LPJ_P0029393 Smcr8 protein_coding protein_coding MGP_LPJ_T0029394.1 MGP_LPJ_G0018334.1 mouse_genomes_project 11 61273620 61284224 + MGP_LPJ_P0029394 Smcr8 protein_coding protein_coding MGP_LPJ_T0098945.1 MGP_LPJ_G0037208.1 mouse_genomes_project 11 102024892 102024999 + Gm22061 snRNA snRNA MGP_LPJ_T0009743.1 MGP_LPJ_G0007861.1 mouse_genomes_project 11 89880555 89880619 + Mir142 miRNA miRNA MGP_LPJ_T0033995.1 MGP_LPJ_G0019411.1 mouse_genomes_project 11 125303752 125312038 + MGP_LPJ_P0033995 Gcgr protein_coding protein_coding MGP_LPJ_T0033996.1 MGP_LPJ_G0019411.1 mouse_genomes_project 11 125303797 125312040 + Gcgr protein_coding processed_transcript MGP_LPJ_T0033997.1 MGP_LPJ_G0019411.1 mouse_genomes_project 11 125303827 125312037 + Gcgr protein_coding processed_transcript MGP_LPJ_T0033998.1 MGP_LPJ_G0019411.1 mouse_genomes_project 11 125307733 125309763 + Gcgr protein_coding processed_transcript MGP_LPJ_T0032939.1 MGP_LPJ_G0019198.1 mouse_genomes_project 11 109890516 109930012 - Strada protein_coding processed_transcript MGP_LPJ_T0032940.1 MGP_LPJ_G0019198.1 mouse_genomes_project 11 109890537 109921394 - MGP_LPJ_P0032940 Strada protein_coding protein_coding MGP_LPJ_T0032941.1 MGP_LPJ_G0019198.1 mouse_genomes_project 11 109891034 109921420 - MGP_LPJ_P0032941 Strada protein_coding protein_coding MGP_LPJ_T0032942.1 MGP_LPJ_G0019198.1 mouse_genomes_project 11 109895661 109921397 - MGP_LPJ_P0032942 Strada protein_coding protein_coding MGP_LPJ_T0032943.1 MGP_LPJ_G0019198.1 mouse_genomes_project 11 109911057 109921430 - MGP_LPJ_P0032943 Strada protein_coding protein_coding MGP_LPJ_T0027800.1 MGP_LPJ_G0017907.1 mouse_genomes_project 11 2200707 2207911 + MGP_LPJ_P0027800 Rhbdd3 protein_coding protein_coding MGP_LPJ_T0027801.1 MGP_LPJ_G0017907.1 mouse_genomes_project 11 2200858 2202369 + Rhbdd3 protein_coding processed_transcript MGP_LPJ_T0027802.1 MGP_LPJ_G0017907.1 mouse_genomes_project 11 2201054 2202289 + Rhbdd3 protein_coding processed_transcript MGP_LPJ_T0027803.1 MGP_LPJ_G0017907.1 mouse_genomes_project 11 2201214 2205169 + MGP_LPJ_P0027803 Rhbdd3 protein_coding protein_coding MGP_LPJ_T0027804.1 MGP_LPJ_G0017907.1 mouse_genomes_project 11 2201220 2207911 + MGP_LPJ_P0027804 Rhbdd3 protein_coding protein_coding MGP_LPJ_T0027805.1 MGP_LPJ_G0017907.1 mouse_genomes_project 11 2201257 2205074 + MGP_LPJ_P0027805 Rhbdd3 protein_coding protein_coding MGP_LPJ_T0027806.1 MGP_LPJ_G0017907.1 mouse_genomes_project 11 2201389 2205080 + MGP_LPJ_P0027806 Rhbdd3 protein_coding protein_coding MGP_LPJ_T0027807.1 MGP_LPJ_G0017907.1 mouse_genomes_project 11 2201938 2207911 + MGP_LPJ_P0027807 Rhbdd3 protein_coding protein_coding MGP_LPJ_T0027808.1 MGP_LPJ_G0017907.1 mouse_genomes_project 11 2201951 2207048 + MGP_LPJ_P0027808 Rhbdd3 protein_coding protein_coding MGP_LPJ_T0027809.1 MGP_LPJ_G0017907.1 mouse_genomes_project 11 2202018 2207913 + Rhbdd3 protein_coding processed_transcript MGP_LPJ_T0034156.1 MGP_LPJ_G0019441.1 mouse_genomes_project 11 125926979 125929442 - MGP_LPJ_P0034156 Tex19.2 protein_coding protein_coding MGP_LPJ_T0012564.1 MGP_LPJ_G0010655.1 mouse_genomes_project 11 39472131 39473340 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101775.1 MGP_LPJ_G0039813.1 mouse_genomes_project 11 75483494 75484512 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0006236.1 MGP_LPJ_G0005207.1 mouse_genomes_project 11 31754644 31772086 + Gm12116 lincRNA lincRNA MGP_LPJ_T0006252.1 MGP_LPJ_G0005222.1 mouse_genomes_project 11 45607841 45614728 - 2310031A07Rik lincRNA lincRNA MGP_LPJ_T0003176.1 MGP_LPJ_G0002949.1 mouse_genomes_project 11 50880259 50881848 + Gm12569 antisense antisense MGP_LPJ_T0003177.1 MGP_LPJ_G0002949.1 mouse_genomes_project 11 50880919 50881703 + Gm12569 antisense antisense MGP_LPJ_T0029446.1 MGP_LPJ_G0018346.1 mouse_genomes_project 11 61872500 61913011 - MGP_LPJ_P0029446 Slc47a1 protein_coding protein_coding MGP_LPJ_T0029447.1 MGP_LPJ_G0018346.1 mouse_genomes_project 11 61872501 61912994 - MGP_LPJ_P0029447 Slc47a1 protein_coding nonsense_mediated_decay MGP_LPJ_T0029448.1 MGP_LPJ_G0018346.1 mouse_genomes_project 11 61892560 61897629 - Slc47a1 protein_coding processed_transcript MGP_LPJ_T0029449.1 MGP_LPJ_G0018346.1 mouse_genomes_project 11 61892737 61913275 - MGP_LPJ_P0029449 Slc47a1 protein_coding protein_coding MGP_LPJ_T0012583.1 MGP_LPJ_G0010674.1 mouse_genomes_project 11 48466288 48466598 - processed_pseudogene processed_pseudogene MGP_LPJ_T0033307.1 MGP_LPJ_G0019282.1 mouse_genomes_project 11 119713937 119720806 - MGP_LPJ_P0033307 Ush1g protein_coding protein_coding MGP_LPJ_T0003268.1 MGP_LPJ_G0003025.1 mouse_genomes_project 11 87725995 87742600 - Bcas3os1 antisense antisense MGP_LPJ_T0003269.1 MGP_LPJ_G0003025.1 mouse_genomes_project 11 87727190 87742600 - Bcas3os1 antisense antisense MGP_LPJ_T0032616.1 MGP_LPJ_G0019131.1 mouse_genomes_project 11 105767407 105775717 - MGP_LPJ_P0032616 Atxn7l3 protein_coding protein_coding MGP_LPJ_T0032617.1 MGP_LPJ_G0019131.1 mouse_genomes_project 11 105767411 105771557 - Atxn7l3 protein_coding retained_intron MGP_LPJ_T0032618.1 MGP_LPJ_G0019131.1 mouse_genomes_project 11 105767411 105776030 - MGP_LPJ_P0032618 Atxn7l3 protein_coding protein_coding MGP_LPJ_T0032619.1 MGP_LPJ_G0019131.1 mouse_genomes_project 11 105767411 105777257 - MGP_LPJ_P0032619 Atxn7l3 protein_coding protein_coding MGP_LPJ_T0032620.1 MGP_LPJ_G0019131.1 mouse_genomes_project 11 105767411 105775705 - MGP_LPJ_P0032620 Atxn7l3 protein_coding protein_coding MGP_LPJ_T0032621.1 MGP_LPJ_G0019131.1 mouse_genomes_project 11 105767412 105777255 - MGP_LPJ_P0032621 Atxn7l3 protein_coding protein_coding MGP_LPJ_T0032246.1 MGP_LPJ_G0019055.1 mouse_genomes_project 11 103719112 103731016 + MGP_LPJ_P0032246 Fkbp10 protein_coding protein_coding MGP_LPJ_T0032247.1 MGP_LPJ_G0019055.1 mouse_genomes_project 11 103719181 103730304 + MGP_LPJ_P0032247 Fkbp10 protein_coding protein_coding MGP_LPJ_T0032248.1 MGP_LPJ_G0019055.1 mouse_genomes_project 11 103719260 103728281 + MGP_LPJ_P0032248 Fkbp10 protein_coding nonsense_mediated_decay MGP_LPJ_T0032249.1 MGP_LPJ_G0019055.1 mouse_genomes_project 11 103726615 103727888 + Fkbp10 protein_coding retained_intron MGP_LPJ_T0032252.1 MGP_LPJ_G0019055.1 mouse_genomes_project 11 103729229 103730492 + Fkbp10 protein_coding retained_intron MGP_LPJ_T0006212.1 MGP_LPJ_G0005189.1 mouse_genomes_project 11 22107502 22113036 - Gm12065 lincRNA lincRNA MGP_LPJ_T0006240.1 MGP_LPJ_G0005211.1 mouse_genomes_project 11 37244451 37278670 - Gm12130 lincRNA lincRNA MGP_LPJ_T0012523.1 MGP_LPJ_G0010614.1 mouse_genomes_project 11 24392245 24393463 + processed_pseudogene processed_pseudogene MGP_LPJ_T0028803.1 MGP_LPJ_G0018163.1 mouse_genomes_project 11 50440433 50454971 - MGP_LPJ_P0028803 Zfp454 protein_coding protein_coding MGP_LPJ_T0028804.1 MGP_LPJ_G0018163.1 mouse_genomes_project 11 50441601 50455124 - Zfp454 protein_coding processed_transcript MGP_LPJ_T0028805.1 MGP_LPJ_G0018163.1 mouse_genomes_project 11 50445352 50455124 - MGP_LPJ_P0028805 Zfp454 protein_coding protein_coding MGP_LPJ_T0028806.1 MGP_LPJ_G0018163.1 mouse_genomes_project 11 50445564 50455003 - Zfp454 protein_coding processed_transcript MGP_LPJ_T0033228.1 MGP_LPJ_G0019261.1 mouse_genomes_project 11 119068860 119087653 + Dnaic2 protein_coding processed_transcript MGP_LPJ_T0033229.1 MGP_LPJ_G0019261.1 mouse_genomes_project 11 119068864 119103247 + MGP_LPJ_P0033229 Dnaic2 protein_coding protein_coding MGP_LPJ_T0033230.1 MGP_LPJ_G0019261.1 mouse_genomes_project 11 119068868 119097608 + Dnaic2 protein_coding processed_transcript MGP_LPJ_T0033231.1 MGP_LPJ_G0019261.1 mouse_genomes_project 11 119070588 119103247 + MGP_LPJ_P0033231 Dnaic2 protein_coding protein_coding MGP_LPJ_T0033232.1 MGP_LPJ_G0019261.1 mouse_genomes_project 11 119074297 119097718 + MGP_LPJ_P0033232 Dnaic2 protein_coding protein_coding MGP_LPJ_T0033233.1 MGP_LPJ_G0019261.1 mouse_genomes_project 11 119079031 119097325 + Dnaic2 protein_coding processed_transcript MGP_LPJ_T0033234.1 MGP_LPJ_G0019261.1 mouse_genomes_project 11 119095931 119102520 + Dnaic2 protein_coding processed_transcript MGP_LPJ_T0009709.1 MGP_LPJ_G0007827.1 mouse_genomes_project 11 70517487 70517565 - Gm27493 miRNA miRNA MGP_LPJ_T0031644.1 MGP_LPJ_G0018862.1 mouse_genomes_project 11 97129952 97141715 - MGP_LPJ_P0031644 Epn3 protein_coding protein_coding MGP_LPJ_T0031645.1 MGP_LPJ_G0018862.1 mouse_genomes_project 11 97131448 97141650 - Epn3 protein_coding processed_transcript MGP_LPJ_T0031646.1 MGP_LPJ_G0018862.1 mouse_genomes_project 11 97136338 97138587 - Epn3 protein_coding processed_transcript MGP_LPJ_T0031647.1 MGP_LPJ_G0018862.1 mouse_genomes_project 11 97136702 97140841 - Epn3 protein_coding processed_transcript MGP_LPJ_T0029516.1 MGP_LPJ_G0018358.1 mouse_genomes_project 11 62514449 62682901 + Specc1 protein_coding retained_intron MGP_LPJ_T0029517.1 MGP_LPJ_G0018358.1 mouse_genomes_project 11 62514449 62702358 + MGP_LPJ_P0029517 Specc1 protein_coding protein_coding MGP_LPJ_T0029518.1 MGP_LPJ_G0018358.1 mouse_genomes_project 11 62514465 62702804 + MGP_LPJ_P0029518 Specc1 protein_coding protein_coding MGP_LPJ_T0029519.1 MGP_LPJ_G0018358.1 mouse_genomes_project 11 62514496 62607069 + Specc1 protein_coding retained_intron MGP_LPJ_T0029520.1 MGP_LPJ_G0018358.1 mouse_genomes_project 11 62514501 62787940 + MGP_LPJ_P0029520 Specc1 protein_coding protein_coding MGP_LPJ_T0029521.1 MGP_LPJ_G0018358.1 mouse_genomes_project 11 62537078 62635272 + Specc1 protein_coding processed_transcript MGP_LPJ_T0029522.1 MGP_LPJ_G0018358.1 mouse_genomes_project 11 62567556 62702358 + MGP_LPJ_P0029522 Specc1 protein_coding protein_coding MGP_LPJ_T0029523.1 MGP_LPJ_G0018358.1 mouse_genomes_project 11 62580854 62706001 + MGP_LPJ_P0029523 Specc1 protein_coding protein_coding MGP_LPJ_T0029524.1 MGP_LPJ_G0018358.1 mouse_genomes_project 11 62580870 62788469 + MGP_LPJ_P0029524 Specc1 protein_coding protein_coding MGP_LPJ_T0029525.1 MGP_LPJ_G0018358.1 mouse_genomes_project 11 62591150 62791003 + MGP_LPJ_P0029525 Specc1 protein_coding protein_coding MGP_LPJ_T0029526.1 MGP_LPJ_G0018358.1 mouse_genomes_project 11 62591242 62789119 + MGP_LPJ_P0029526 Specc1 protein_coding protein_coding MGP_LPJ_T0029527.1 MGP_LPJ_G0018358.1 mouse_genomes_project 11 62638559 62790997 + MGP_LPJ_P0029527 Specc1 protein_coding protein_coding MGP_LPJ_T0029528.1 MGP_LPJ_G0018358.1 mouse_genomes_project 11 62638563 62788089 + MGP_LPJ_P0029528 Specc1 protein_coding protein_coding MGP_LPJ_T0029529.1 MGP_LPJ_G0018358.1 mouse_genomes_project 11 62638609 62639884 + Specc1 protein_coding retained_intron MGP_LPJ_T0029530.1 MGP_LPJ_G0018358.1 mouse_genomes_project 11 62638623 62702371 + MGP_LPJ_P0029530 Specc1 protein_coding protein_coding MGP_LPJ_T0029531.1 MGP_LPJ_G0018358.1 mouse_genomes_project 11 62638655 62702805 + MGP_LPJ_P0029531 Specc1 protein_coding protein_coding MGP_LPJ_T0029532.1 MGP_LPJ_G0018358.1 mouse_genomes_project 11 62638661 62791003 + MGP_LPJ_P0029532 Specc1 protein_coding protein_coding MGP_LPJ_T0012595.1 MGP_LPJ_G0010686.1 mouse_genomes_project 11 53163979 53164367 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009771.1 MGP_LPJ_G0007889.1 mouse_genomes_project 11 110567575 110567642 - Mir3064 miRNA miRNA MGP_LPJ_T0012719.1 MGP_LPJ_G0010810.1 mouse_genomes_project 11 99092863 99093333 + processed_pseudogene processed_pseudogene MGP_LPJ_T0028552.1 MGP_LPJ_G0018088.1 mouse_genomes_project 11 42808665 42877365 - MGP_LPJ_P0028552 Adra1b protein_coding protein_coding MGP_LPJ_T0028553.1 MGP_LPJ_G0018088.1 mouse_genomes_project 11 42808665 42945058 - MGP_LPJ_P0028553 Adra1b protein_coding protein_coding MGP_LPJ_T0028554.1 MGP_LPJ_G0018088.1 mouse_genomes_project 11 42810068 42945058 - MGP_LPJ_P0028554 Adra1b protein_coding protein_coding MGP_LPJ_T0012483.1 MGP_LPJ_G0010574.1 mouse_genomes_project 11 12261165 12261915 + processed_pseudogene processed_pseudogene MGP_LPJ_T0032202.1 MGP_LPJ_G0019036.1 mouse_genomes_project 11 103275517 103285745 - MGP_LPJ_P0032202 Krt33a protein_coding protein_coding MGP_LPJ_T0003287.1 MGP_LPJ_G0003038.1 mouse_genomes_project 11 98101875 98103271 - Gm11521 antisense antisense MGP_LPJ_T0009727.1 MGP_LPJ_G0007845.1 mouse_genomes_project 11 76649365 76649480 - miRNA miRNA MGP_LPJ_T0012596.1 MGP_LPJ_G0010687.1 mouse_genomes_project 11 53339236 53339812 + processed_pseudogene processed_pseudogene MGP_LPJ_T0030932.1 MGP_LPJ_G0018680.1 mouse_genomes_project 11 79874628 79880307 + MGP_LPJ_P0030932 Unc119 protein_coding protein_coding MGP_LPJ_T0030933.1 MGP_LPJ_G0018680.1 mouse_genomes_project 11 79874644 79878992 + Unc119 protein_coding retained_intron MGP_LPJ_T0030934.1 MGP_LPJ_G0018680.1 mouse_genomes_project 11 79874652 79880307 + MGP_LPJ_P0030934 Unc119 protein_coding protein_coding MGP_LPJ_T0030935.1 MGP_LPJ_G0018680.1 mouse_genomes_project 11 79874691 79880039 + Unc119 protein_coding retained_intron MGP_LPJ_T0030936.1 MGP_LPJ_G0018680.1 mouse_genomes_project 11 79877808 79880122 + MGP_LPJ_P0030936 Unc119 protein_coding protein_coding MGP_LPJ_T0030937.1 MGP_LPJ_G0018680.1 mouse_genomes_project 11 79878053 79879262 + Unc119 protein_coding retained_intron MGP_LPJ_T0030938.1 MGP_LPJ_G0018680.1 mouse_genomes_project 11 79879077 79880141 + Unc119 protein_coding retained_intron MGP_LPJ_T0028765.1 MGP_LPJ_G0018154.1 mouse_genomes_project 11 49758923 49806942 - MGP_LPJ_P0028765 Maml1 protein_coding protein_coding MGP_LPJ_T0028766.1 MGP_LPJ_G0018154.1 mouse_genomes_project 11 49758923 49807449 - MGP_LPJ_P0028766 Maml1 protein_coding protein_coding MGP_LPJ_T0031598.1 MGP_LPJ_G0018854.1 mouse_genomes_project 11 96820481 96824464 + MGP_LPJ_P0031598 Tob1 protein_coding protein_coding MGP_LPJ_T0006343.1 MGP_LPJ_G0005291.1 mouse_genomes_project 11 98485417 98487667 - Gm9796 lincRNA lincRNA MGP_LPJ_T0006344.1 MGP_LPJ_G0005291.1 mouse_genomes_project 11 98485421 98487667 - Gm9796 lincRNA lincRNA MGP_LPJ_T0006285.1 MGP_LPJ_G0005250.1 mouse_genomes_project 11 71778602 71780318 - Gm12319 lincRNA lincRNA MGP_LPJ_T0028979.1 MGP_LPJ_G0018213.1 mouse_genomes_project 11 53582190 53586504 + MGP_LPJ_P0028979 Il5 protein_coding protein_coding MGP_LPJ_T0032463.1 MGP_LPJ_G0019102.1 mouse_genomes_project 11 104829996 104843041 + MGP_LPJ_P0032463 Rundc1 protein_coding protein_coding MGP_LPJ_T0033939.1 MGP_LPJ_G0019400.1 mouse_genomes_project 11 125120556 125127191 + MGP_LPJ_P0033939 Fscn2 protein_coding protein_coding MGP_LPJ_T0033940.1 MGP_LPJ_G0019400.1 mouse_genomes_project 11 125125564 125126971 + Fscn2 protein_coding processed_transcript MGP_LPJ_T0033941.1 MGP_LPJ_G0019400.1 mouse_genomes_project 11 125125735 125126843 + Fscn2 protein_coding processed_transcript MGP_LPJ_T0033251.1 MGP_LPJ_G0019265.1 mouse_genomes_project 11 119208081 119225545 + MGP_LPJ_P0033251 Gprc5c protein_coding protein_coding MGP_LPJ_T0033252.1 MGP_LPJ_G0019265.1 mouse_genomes_project 11 119208469 119230983 + MGP_LPJ_P0033252 Gprc5c protein_coding protein_coding MGP_LPJ_T0033253.1 MGP_LPJ_G0019265.1 mouse_genomes_project 11 119208779 119230984 + MGP_LPJ_P0033253 Gprc5c protein_coding protein_coding MGP_LPJ_T0033254.1 MGP_LPJ_G0019265.1 mouse_genomes_project 11 119208809 119226159 + MGP_LPJ_P0033254 Gprc5c protein_coding protein_coding MGP_LPJ_T0033255.1 MGP_LPJ_G0019265.1 mouse_genomes_project 11 119209172 119232241 + MGP_LPJ_P0033255 Gprc5c protein_coding protein_coding MGP_LPJ_T0033256.1 MGP_LPJ_G0019265.1 mouse_genomes_project 11 119209248 119225709 + MGP_LPJ_P0033256 Gprc5c protein_coding protein_coding MGP_LPJ_T0033257.1 MGP_LPJ_G0019265.1 mouse_genomes_project 11 119226303 119232495 + MGP_LPJ_P0033257 Gprc5c protein_coding protein_coding MGP_LPJ_T0012657.1 MGP_LPJ_G0010748.1 mouse_genomes_project 11 72229592 72230522 + processed_pseudogene processed_pseudogene MGP_LPJ_T0031309.1 MGP_LPJ_G0018784.1 mouse_genomes_project 11 87320461 87358325 + MGP_LPJ_P0031309 Ppm1d protein_coding protein_coding MGP_LPJ_T0031310.1 MGP_LPJ_G0018784.1 mouse_genomes_project 11 87321381 87348488 + MGP_LPJ_P0031310 Ppm1d protein_coding protein_coding MGP_LPJ_T0003254.1 MGP_LPJ_G0003014.1 mouse_genomes_project 11 81096604 81098917 - AU040972 antisense antisense MGP_LPJ_T0031185.1 MGP_LPJ_G0018752.1 mouse_genomes_project 11 85327608 85349856 - MGP_LPJ_P0031185 Mmp28 protein_coding protein_coding MGP_LPJ_T0031186.1 MGP_LPJ_G0018752.1 mouse_genomes_project 11 85328714 85349795 - MGP_LPJ_P0031186 Mmp28 protein_coding protein_coding MGP_LPJ_T0031187.1 MGP_LPJ_G0018752.1 mouse_genomes_project 11 85328714 85349905 - MGP_LPJ_P0031187 Mmp28 protein_coding protein_coding MGP_LPJ_T0031188.1 MGP_LPJ_G0018752.1 mouse_genomes_project 11 85329902 85349826 - MGP_LPJ_P0031188 Mmp28 protein_coding protein_coding MGP_LPJ_T0031189.1 MGP_LPJ_G0018752.1 mouse_genomes_project 11 85338200 85349905 - Mmp28 protein_coding processed_transcript MGP_LPJ_T0012672.1 MGP_LPJ_G0010763.1 mouse_genomes_project 11 79011264 79012729 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012674.1 MGP_LPJ_G0010765.1 mouse_genomes_project 11 79124309 79125076 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012511.1 MGP_LPJ_G0010602.1 mouse_genomes_project 11 19041957 19042258 + processed_pseudogene processed_pseudogene MGP_LPJ_T0032931.1 MGP_LPJ_G0019195.1 mouse_genomes_project 11 109807033 109882635 + MGP_LPJ_P0032931 Map3k3 protein_coding protein_coding MGP_LPJ_T0032932.1 MGP_LPJ_G0019195.1 mouse_genomes_project 11 109878399 109879566 + Map3k3 protein_coding processed_transcript MGP_LPJ_T0032933.1 MGP_LPJ_G0019195.1 mouse_genomes_project 11 109879251 109881328 + Map3k3 protein_coding processed_transcript MGP_LPJ_T0009765.1 MGP_LPJ_G0007883.1 mouse_genomes_project 11 105898811 105898879 - Mir6930 miRNA miRNA MGP_LPJ_T0028490.1 MGP_LPJ_G0018072.1 mouse_genomes_project 11 39638944 39645318 + MGP_LPJ_P0028490 Nudcd2 protein_coding protein_coding MGP_LPJ_T0028491.1 MGP_LPJ_G0018072.1 mouse_genomes_project 11 39639021 39641690 + Nudcd2 protein_coding processed_transcript MGP_LPJ_T0028492.1 MGP_LPJ_G0018072.1 mouse_genomes_project 11 39639223 39644822 + MGP_LPJ_P0028492 Nudcd2 protein_coding protein_coding MGP_LPJ_T0028493.1 MGP_LPJ_G0018072.1 mouse_genomes_project 11 39639482 39644755 + Nudcd2 protein_coding processed_transcript MGP_LPJ_T0028494.1 MGP_LPJ_G0018072.1 mouse_genomes_project 11 39641583 39644536 + Nudcd2 protein_coding processed_transcript MGP_LPJ_T0012450.1 MGP_LPJ_G0010541.1 mouse_genomes_project 11 605424 606262 + processed_pseudogene processed_pseudogene MGP_LPJ_T0033987.1 MGP_LPJ_G0019409.1 mouse_genomes_project 11 125255219 125259672 + MGP_LPJ_P0033987 Mrpl12 protein_coding protein_coding MGP_LPJ_T0033988.1 MGP_LPJ_G0019409.1 mouse_genomes_project 11 125255633 125259064 + Mrpl12 protein_coding processed_transcript MGP_LPJ_T0009666.1 MGP_LPJ_G0007784.1 mouse_genomes_project 11 3666758 3666811 - Gm22123 miRNA miRNA MGP_LPJ_T0027978.1 MGP_LPJ_G0017951.1 mouse_genomes_project 11 6476930 6509302 + Abca13 protein_coding processed_transcript MGP_LPJ_T0027979.1 MGP_LPJ_G0017951.1 mouse_genomes_project 11 6476930 6986094 + MGP_LPJ_P0027979 Abca13 protein_coding protein_coding MGP_LPJ_T0027980.1 MGP_LPJ_G0017951.1 mouse_genomes_project 11 6478440 6541600 + MGP_LPJ_P0027980 Abca13 protein_coding protein_coding MGP_LPJ_T0032622.1 MGP_LPJ_G0019132.1 mouse_genomes_project 11 105785622 105805094 - MGP_LPJ_P0032622 Ubtf protein_coding protein_coding MGP_LPJ_T0032623.1 MGP_LPJ_G0019132.1 mouse_genomes_project 11 105785623 105805094 - MGP_LPJ_P0032623 Ubtf protein_coding protein_coding MGP_LPJ_T0032624.1 MGP_LPJ_G0019132.1 mouse_genomes_project 11 105788228 105802711 - MGP_LPJ_P0032624 Ubtf protein_coding protein_coding MGP_LPJ_T0032625.1 MGP_LPJ_G0019132.1 mouse_genomes_project 11 105788228 105805094 - MGP_LPJ_P0032625 Ubtf protein_coding protein_coding MGP_LPJ_T0032626.1 MGP_LPJ_G0019132.1 mouse_genomes_project 11 105788228 105803906 - MGP_LPJ_P0032626 Ubtf protein_coding protein_coding MGP_LPJ_T0032627.1 MGP_LPJ_G0019132.1 mouse_genomes_project 11 105788228 105802735 - MGP_LPJ_P0032627 Ubtf protein_coding protein_coding MGP_LPJ_T0032628.1 MGP_LPJ_G0019132.1 mouse_genomes_project 11 105788297 105803323 - MGP_LPJ_P0032628 Ubtf protein_coding protein_coding MGP_LPJ_T0032629.1 MGP_LPJ_G0019132.1 mouse_genomes_project 11 105788600 105803671 - MGP_LPJ_P0032629 Ubtf protein_coding protein_coding MGP_LPJ_T0032630.1 MGP_LPJ_G0019132.1 mouse_genomes_project 11 105788786 105805720 - MGP_LPJ_P0032630 Ubtf protein_coding protein_coding MGP_LPJ_T0032631.1 MGP_LPJ_G0019132.1 mouse_genomes_project 11 105790836 105795474 - Ubtf protein_coding retained_intron MGP_LPJ_T0032632.1 MGP_LPJ_G0019132.1 mouse_genomes_project 11 105795073 105795942 - Ubtf protein_coding retained_intron MGP_LPJ_T0032633.1 MGP_LPJ_G0019132.1 mouse_genomes_project 11 105797788 105802706 - MGP_LPJ_P0032633 Ubtf protein_coding protein_coding MGP_LPJ_T0032634.1 MGP_LPJ_G0019132.1 mouse_genomes_project 11 105799642 105802736 - MGP_LPJ_P0032634 Ubtf protein_coding protein_coding MGP_LPJ_T0033061.1 MGP_LPJ_G0019223.1 mouse_genomes_project 11 111401721 111438217 + Helz protein_coding processed_transcript MGP_LPJ_T0033062.1 MGP_LPJ_G0019223.1 mouse_genomes_project 11 111401747 111536460 + MGP_LPJ_P0033062 Helz protein_coding protein_coding MGP_LPJ_T0033063.1 MGP_LPJ_G0019223.1 mouse_genomes_project 11 111401751 111551127 + MGP_LPJ_P0033063 Helz protein_coding protein_coding MGP_LPJ_T0033064.1 MGP_LPJ_G0019223.1 mouse_genomes_project 11 111401759 111558944 + MGP_LPJ_P0033064 Helz protein_coding protein_coding MGP_LPJ_T0033065.1 MGP_LPJ_G0019223.1 mouse_genomes_project 11 111489330 111536460 + MGP_LPJ_P0033065 Helz protein_coding protein_coding MGP_LPJ_T0033066.1 MGP_LPJ_G0019223.1 mouse_genomes_project 11 111496447 111508033 + Helz protein_coding processed_transcript MGP_LPJ_T0033067.1 MGP_LPJ_G0019223.1 mouse_genomes_project 11 111535224 111537168 + Helz protein_coding processed_transcript MGP_LPJ_T0033068.1 MGP_LPJ_G0019223.1 mouse_genomes_project 11 111537133 111550697 + Helz protein_coding processed_transcript MGP_LPJ_T0006342.1 MGP_LPJ_G0005290.1 mouse_genomes_project 11 98455215 98458009 + Gm26830 lincRNA lincRNA MGP_LPJ_T0033769.1 MGP_LPJ_G0019367.1 mouse_genomes_project 11 122967547 122981577 - MGP_LPJ_P0033769 BC100451 protein_coding protein_coding MGP_LPJ_T0033770.1 MGP_LPJ_G0019367.1 mouse_genomes_project 11 122967602 122969204 - MGP_LPJ_P0033770 BC100451 protein_coding protein_coding MGP_LPJ_T0012747.1 MGP_LPJ_G0010838.1 mouse_genomes_project 11 108697691 108698380 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009749.1 MGP_LPJ_G0007867.1 mouse_genomes_project 11 99727561 99727634 + Mir152 miRNA miRNA MGP_LPJ_T0032994.1 MGP_LPJ_G0019212.1 mouse_genomes_project 11 110419065 110488839 - MGP_LPJ_P0032994 Pecam1 protein_coding protein_coding MGP_LPJ_T0032995.1 MGP_LPJ_G0019212.1 mouse_genomes_project 11 110419980 110488629 - MGP_LPJ_P0032995 Pecam1 protein_coding protein_coding MGP_LPJ_T0032996.1 MGP_LPJ_G0019212.1 mouse_genomes_project 11 110426050 110428207 - Pecam1 protein_coding retained_intron MGP_LPJ_T0032997.1 MGP_LPJ_G0019212.1 mouse_genomes_project 11 110426667 110531095 - MGP_LPJ_P0032997 Pecam1 protein_coding protein_coding MGP_LPJ_T0032998.1 MGP_LPJ_G0019212.1 mouse_genomes_project 11 110455385 110457929 - Pecam1 protein_coding retained_intron MGP_LPJ_T0032999.1 MGP_LPJ_G0019212.1 mouse_genomes_project 11 110457664 110488523 - MGP_LPJ_P0032999 Pecam1 protein_coding protein_coding MGP_LPJ_T0003309.1 MGP_LPJ_G0003055.1 mouse_genomes_project 11 102518666 102519219 + Gm11940 antisense antisense MGP_LPJ_T0003266.1 MGP_LPJ_G0003024.1 mouse_genomes_project 11 87230224 87230673 + Appbp2os antisense pseudogene MGP_LPJ_T0003267.1 MGP_LPJ_G0003024.1 mouse_genomes_project 11 87230620 87233756 + Appbp2os antisense antisense MGP_LPJ_T0031431.1 MGP_LPJ_G0018812.1 mouse_genomes_project 11 89780836 89852171 + Rnf43 protein_coding retained_intron MGP_LPJ_T0031432.1 MGP_LPJ_G0018812.1 mouse_genomes_project 11 89781201 89838988 + Rnf43 protein_coding processed_transcript MGP_LPJ_T0031433.1 MGP_LPJ_G0018812.1 mouse_genomes_project 11 89782663 89856777 + MGP_LPJ_P0031433 Rnf43 protein_coding protein_coding MGP_LPJ_T0031434.1 MGP_LPJ_G0018812.1 mouse_genomes_project 11 89782730 89859021 + MGP_LPJ_P0031434 Rnf43 protein_coding protein_coding MGP_LPJ_T0031435.1 MGP_LPJ_G0018812.1 mouse_genomes_project 11 89847944 89852763 + Rnf43 protein_coding retained_intron MGP_LPJ_T0031436.1 MGP_LPJ_G0018812.1 mouse_genomes_project 11 89851610 89853350 + Rnf43 protein_coding retained_intron MGP_LPJ_T0031437.1 MGP_LPJ_G0018812.1 mouse_genomes_project 11 89856156 89856705 + Rnf43 protein_coding processed_transcript MGP_LPJ_T0033242.1 MGP_LPJ_G0019263.1 mouse_genomes_project 11 119136579 119141234 - Btbd17 protein_coding processed_transcript MGP_LPJ_T0033243.1 MGP_LPJ_G0019263.1 mouse_genomes_project 11 119136579 119141271 - Btbd17 protein_coding processed_transcript MGP_LPJ_T0033244.1 MGP_LPJ_G0019263.1 mouse_genomes_project 11 119136579 119141258 - MGP_LPJ_P0033244 Btbd17 protein_coding protein_coding MGP_LPJ_T0033245.1 MGP_LPJ_G0019263.1 mouse_genomes_project 11 119137468 119141306 - Btbd17 protein_coding processed_transcript MGP_LPJ_T0033246.1 MGP_LPJ_G0019263.1 mouse_genomes_project 11 119137647 119141260 - Btbd17 protein_coding processed_transcript MGP_LPJ_T0033247.1 MGP_LPJ_G0019263.1 mouse_genomes_project 11 119137794 119141234 - Btbd17 protein_coding processed_transcript MGP_LPJ_T0033248.1 MGP_LPJ_G0019263.1 mouse_genomes_project 11 119137831 119141253 - Btbd17 protein_coding processed_transcript MGP_LPJ_T0027763.1 MGP_LPJ_G0017901.1 mouse_genomes_project 11 1978843 2016260 + MGP_LPJ_P0027763 Thoc5 protein_coding protein_coding MGP_LPJ_T0027764.1 MGP_LPJ_G0017901.1 mouse_genomes_project 11 1978866 2016258 + MGP_LPJ_P0027764 Thoc5 protein_coding protein_coding MGP_LPJ_T0027765.1 MGP_LPJ_G0017901.1 mouse_genomes_project 11 1987336 2001743 + Thoc5 protein_coding processed_transcript MGP_LPJ_T0027766.1 MGP_LPJ_G0017901.1 mouse_genomes_project 11 1987336 1989590 + Thoc5 protein_coding processed_transcript MGP_LPJ_T0027767.1 MGP_LPJ_G0017901.1 mouse_genomes_project 11 1987336 2005668 + MGP_LPJ_P0027767 Thoc5 protein_coding protein_coding MGP_LPJ_T0027768.1 MGP_LPJ_G0017901.1 mouse_genomes_project 11 2002738 2007878 + Thoc5 protein_coding processed_transcript MGP_LPJ_T0101769.1 MGP_LPJ_G0039807.1 mouse_genomes_project 11 74690166 74690251 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0032221.1 MGP_LPJ_G0019047.1 mouse_genomes_project 11 103536293 103542033 - MGP_LPJ_P0032221 Krt16 protein_coding protein_coding MGP_LPJ_T0009760.1 MGP_LPJ_G0007878.1 mouse_genomes_project 11 103791885 103791955 - Mir7116 miRNA miRNA MGP_LPJ_T0009694.1 MGP_LPJ_G0007812.1 mouse_genomes_project 11 53628540 53628598 - Mir7671 miRNA miRNA MGP_LPJ_T0028457.1 MGP_LPJ_G0018064.1 mouse_genomes_project 11 33712525 34322354 + MGP_LPJ_P0028457 Slit3 protein_coding protein_coding MGP_LPJ_T0028458.1 MGP_LPJ_G0018064.1 mouse_genomes_project 11 33764082 33834122 + Slit3 protein_coding processed_transcript MGP_LPJ_T0028459.1 MGP_LPJ_G0018064.1 mouse_genomes_project 11 33770240 34116040 + Slit3 protein_coding processed_transcript MGP_LPJ_T0028460.1 MGP_LPJ_G0018064.1 mouse_genomes_project 11 34151306 34222624 + Slit3 protein_coding processed_transcript MGP_LPJ_T0033569.1 MGP_LPJ_G0019327.1 mouse_genomes_project 11 120823589 120905289 - MGP_LPJ_P0033569 Rnf157 protein_coding protein_coding MGP_LPJ_T0033570.1 MGP_LPJ_G0019327.1 mouse_genomes_project 11 120823589 120849707 - MGP_LPJ_P0033570 Rnf157 protein_coding protein_coding MGP_LPJ_T0033571.1 MGP_LPJ_G0019327.1 mouse_genomes_project 11 120823589 120905289 - MGP_LPJ_P0033571 Rnf157 protein_coding protein_coding MGP_LPJ_T0033572.1 MGP_LPJ_G0019327.1 mouse_genomes_project 11 120825582 120836793 - Rnf157 protein_coding processed_transcript MGP_LPJ_T0033573.1 MGP_LPJ_G0019327.1 mouse_genomes_project 11 120825649 120837267 - MGP_LPJ_P0033573 Rnf157 protein_coding protein_coding MGP_LPJ_T0033574.1 MGP_LPJ_G0019327.1 mouse_genomes_project 11 120841992 120850125 - Rnf157 protein_coding processed_transcript MGP_LPJ_T0033575.1 MGP_LPJ_G0019327.1 mouse_genomes_project 11 120843308 120844810 - Rnf157 protein_coding processed_transcript MGP_LPJ_T0033576.1 MGP_LPJ_G0019327.1 mouse_genomes_project 11 120847968 120849933 - Rnf157 protein_coding processed_transcript MGP_LPJ_T0033577.1 MGP_LPJ_G0019327.1 mouse_genomes_project 11 120849877 120850633 - Rnf157 protein_coding processed_transcript MGP_LPJ_T0033578.1 MGP_LPJ_G0019327.1 mouse_genomes_project 11 120850509 120883988 - Rnf157 protein_coding processed_transcript MGP_LPJ_T0033579.1 MGP_LPJ_G0019327.1 mouse_genomes_project 11 120895389 120905317 - Rnf157 protein_coding processed_transcript MGP_LPJ_T0003149.1 MGP_LPJ_G0002924.1 mouse_genomes_project 11 16598781 16600838 + Gm16140 antisense antisense MGP_LPJ_T0003150.1 MGP_LPJ_G0002924.1 mouse_genomes_project 11 16598783 16600448 + Gm16140 antisense antisense MGP_LPJ_T0003191.1 MGP_LPJ_G0002962.1 mouse_genomes_project 11 55162964 55168666 - Slc36a1os antisense antisense MGP_LPJ_T0003192.1 MGP_LPJ_G0002962.1 mouse_genomes_project 11 55164076 55168848 - Slc36a1os antisense antisense MGP_LPJ_T0017157.1 MGP_LPJ_G0015100.1 mouse_genomes_project 11 77153227 77185065 + Gm12339 processed_transcript antisense MGP_LPJ_T0017158.1 MGP_LPJ_G0015100.1 mouse_genomes_project 11 77153679 77185083 + Gm12339 processed_transcript processed_transcript MGP_LPJ_T0003167.1 MGP_LPJ_G0002940.1 mouse_genomes_project 11 42598311 42599834 - Gm12150 antisense antisense MGP_LPJ_T0100166.1 MGP_LPJ_G0038429.1 mouse_genomes_project 11 79699055 79699126 - Snord4a snoRNA snoRNA MGP_LPJ_T0030671.1 MGP_LPJ_G0018627.1 mouse_genomes_project 11 77190798 77299890 - MGP_LPJ_P0030671 Rph3al protein_coding protein_coding MGP_LPJ_T0030672.1 MGP_LPJ_G0018627.1 mouse_genomes_project 11 77191936 77272371 - MGP_LPJ_P0030672 Rph3al protein_coding protein_coding MGP_LPJ_T0030673.1 MGP_LPJ_G0018627.1 mouse_genomes_project 11 77261040 77288009 - MGP_LPJ_P0030673 Rph3al protein_coding protein_coding MGP_LPJ_T0030674.1 MGP_LPJ_G0018627.1 mouse_genomes_project 11 77262056 77299849 - MGP_LPJ_P0030674 Rph3al protein_coding protein_coding MGP_LPJ_T0030675.1 MGP_LPJ_G0018627.1 mouse_genomes_project 11 77267889 77300581 - MGP_LPJ_P0030675 Rph3al protein_coding protein_coding MGP_LPJ_T0029044.1 MGP_LPJ_G0018227.1 mouse_genomes_project 11 54453921 54630410 + MGP_LPJ_P0029044 Rapgef6 protein_coding protein_coding MGP_LPJ_T0029045.1 MGP_LPJ_G0018227.1 mouse_genomes_project 11 54453963 54484766 + Rapgef6 protein_coding processed_transcript MGP_LPJ_T0029046.1 MGP_LPJ_G0018227.1 mouse_genomes_project 11 54453964 54563171 + MGP_LPJ_P0029046 Rapgef6 protein_coding protein_coding MGP_LPJ_T0029047.1 MGP_LPJ_G0018227.1 mouse_genomes_project 11 54453964 54628104 + MGP_LPJ_P0029047 Rapgef6 protein_coding protein_coding MGP_LPJ_T0029048.1 MGP_LPJ_G0018227.1 mouse_genomes_project 11 54453985 54493265 + Rapgef6 protein_coding processed_transcript MGP_LPJ_T0029049.1 MGP_LPJ_G0018227.1 mouse_genomes_project 11 54454124 54627230 + MGP_LPJ_P0029049 Rapgef6 protein_coding unknown_likely_coding MGP_LPJ_T0029050.1 MGP_LPJ_G0018227.1 mouse_genomes_project 11 54520856 54567026 + Rapgef6 protein_coding processed_transcript MGP_LPJ_T0029051.1 MGP_LPJ_G0018227.1 mouse_genomes_project 11 54550527 54618717 + MGP_LPJ_P0029051 Rapgef6 protein_coding protein_coding MGP_LPJ_T0029052.1 MGP_LPJ_G0018227.1 mouse_genomes_project 11 54550527 54618796 + MGP_LPJ_P0029052 Rapgef6 protein_coding protein_coding MGP_LPJ_T0029053.1 MGP_LPJ_G0018227.1 mouse_genomes_project 11 54622123 54627611 + MGP_LPJ_P0029053 Rapgef6 protein_coding protein_coding MGP_LPJ_T0033069.1 MGP_LPJ_G0019224.1 mouse_genomes_project 11 111568305 111581584 - MGP_LPJ_P0033069 Cacng1 protein_coding protein_coding MGP_LPJ_T0029209.1 MGP_LPJ_G0018288.1 mouse_genomes_project 11 59241185 59257364 + MGP_LPJ_P0029209 2810021J22Rik protein_coding protein_coding MGP_LPJ_T0029210.1 MGP_LPJ_G0018288.1 mouse_genomes_project 11 59241236 59252082 + MGP_LPJ_P0029210 2810021J22Rik protein_coding protein_coding MGP_LPJ_T0003340.1 MGP_LPJ_G0003082.1 mouse_genomes_project 11 110832592 110834913 + antisense antisense MGP_LPJ_T0003341.1 MGP_LPJ_G0003082.1 mouse_genomes_project 11 110832697 110834918 + antisense antisense MGP_LPJ_T0031583.1 MGP_LPJ_G0018852.1 mouse_genomes_project 11 96545135 96563762 - MGP_LPJ_P0031583 Nme1 protein_coding protein_coding MGP_LPJ_T0031584.1 MGP_LPJ_G0018852.1 mouse_genomes_project 11 96547634 96558224 - MGP_LPJ_P0031584 Nme1 protein_coding protein_coding MGP_LPJ_T0031585.1 MGP_LPJ_G0018852.1 mouse_genomes_project 11 96550490 96563493 - MGP_LPJ_P0031585 Nme1 protein_coding protein_coding MGP_LPJ_T0029070.1 MGP_LPJ_G0018232.1 mouse_genomes_project 11 54855676 54904476 - MGP_LPJ_P0029070 Tnip1 protein_coding protein_coding MGP_LPJ_T0029071.1 MGP_LPJ_G0018232.1 mouse_genomes_project 11 54855678 54904458 - Tnip1 protein_coding processed_transcript MGP_LPJ_T0029072.1 MGP_LPJ_G0018232.1 mouse_genomes_project 11 54855678 54911270 - MGP_LPJ_P0029072 Tnip1 protein_coding protein_coding MGP_LPJ_T0029073.1 MGP_LPJ_G0018232.1 mouse_genomes_project 11 54855678 54911266 - MGP_LPJ_P0029073 Tnip1 protein_coding protein_coding MGP_LPJ_T0029074.1 MGP_LPJ_G0018232.1 mouse_genomes_project 11 54855678 54911271 - MGP_LPJ_P0029074 Tnip1 protein_coding protein_coding MGP_LPJ_T0029075.1 MGP_LPJ_G0018232.1 mouse_genomes_project 11 54855678 54911264 - MGP_LPJ_P0029075 Tnip1 protein_coding protein_coding MGP_LPJ_T0029076.1 MGP_LPJ_G0018232.1 mouse_genomes_project 11 54855680 54911263 - MGP_LPJ_P0029076 Tnip1 protein_coding protein_coding MGP_LPJ_T0029077.1 MGP_LPJ_G0018232.1 mouse_genomes_project 11 54863503 54865967 - Tnip1 protein_coding retained_intron MGP_LPJ_T0029078.1 MGP_LPJ_G0018232.1 mouse_genomes_project 11 54871594 54904476 - MGP_LPJ_P0029078 Tnip1 protein_coding protein_coding MGP_LPJ_T0029079.1 MGP_LPJ_G0018232.1 mouse_genomes_project 11 54878919 54904401 - MGP_LPJ_P0029079 Tnip1 protein_coding protein_coding MGP_LPJ_T0029080.1 MGP_LPJ_G0018232.1 mouse_genomes_project 11 54887426 54904441 - Tnip1 protein_coding processed_transcript MGP_LPJ_T0029081.1 MGP_LPJ_G0018232.1 mouse_genomes_project 11 54887480 54911263 - Tnip1 protein_coding processed_transcript MGP_LPJ_T0029958.1 MGP_LPJ_G0018458.1 mouse_genomes_project 11 70806504 70820742 + MGP_LPJ_P0029958 Zbtb4 protein_coding protein_coding MGP_LPJ_T0029959.1 MGP_LPJ_G0018458.1 mouse_genomes_project 11 70806504 70824553 + MGP_LPJ_P0029959 Zbtb4 protein_coding protein_coding MGP_LPJ_T0029960.1 MGP_LPJ_G0018458.1 mouse_genomes_project 11 70806576 70822481 + MGP_LPJ_P0029960 Zbtb4 protein_coding protein_coding MGP_LPJ_T0029961.1 MGP_LPJ_G0018458.1 mouse_genomes_project 11 70806598 70818842 + MGP_LPJ_P0029961 Zbtb4 protein_coding protein_coding MGP_LPJ_T0029962.1 MGP_LPJ_G0018458.1 mouse_genomes_project 11 70807031 70816571 + MGP_LPJ_P0029962 Zbtb4 protein_coding protein_coding MGP_LPJ_T0029963.1 MGP_LPJ_G0018458.1 mouse_genomes_project 11 70807126 70816555 + MGP_LPJ_P0029963 Zbtb4 protein_coding protein_coding MGP_LPJ_T0029964.1 MGP_LPJ_G0018458.1 mouse_genomes_project 11 70815938 70820206 + MGP_LPJ_P0029964 Zbtb4 protein_coding protein_coding MGP_LPJ_T0012636.1 MGP_LPJ_G0010727.1 mouse_genomes_project 11 63361483 63362700 - processed_pseudogene processed_pseudogene MGP_LPJ_T0028051.1 MGP_LPJ_G0017966.1 mouse_genomes_project 11 14711920 14754389 + MGP_LPJ_P0028051 Ppp3r1 protein_coding protein_coding MGP_LPJ_T0028053.1 MGP_LPJ_G0017966.1 mouse_genomes_project 11 14746179 14748442 + Ppp3r1 protein_coding processed_transcript MGP_LPJ_T0006334.1 MGP_LPJ_G0005284.1 mouse_genomes_project 11 91414580 91416867 - Gm11497 lincRNA lincRNA MGP_LPJ_T0029150.1 MGP_LPJ_G0018257.1 mouse_genomes_project 11 58412426 58438523 + MGP_LPJ_P0029150 Irgm2 protein_coding protein_coding MGP_LPJ_T0029151.1 MGP_LPJ_G0018257.1 mouse_genomes_project 11 58430692 58438531 + MGP_LPJ_P0029151 Irgm2 protein_coding protein_coding MGP_LPJ_T0012547.1 MGP_LPJ_G0010638.1 mouse_genomes_project 11 29366719 29367323 - processed_pseudogene processed_pseudogene MGP_LPJ_T0028734.1 MGP_LPJ_G0018147.1 mouse_genomes_project 11 49389304 49466816 + MGP_LPJ_P0028734 Rasgef1c protein_coding protein_coding MGP_LPJ_T0028735.1 MGP_LPJ_G0018147.1 mouse_genomes_project 11 49389534 49467590 + MGP_LPJ_P0028735 Rasgef1c protein_coding protein_coding MGP_LPJ_T0028736.1 MGP_LPJ_G0018147.1 mouse_genomes_project 11 49448983 49462346 + Rasgef1c protein_coding processed_transcript MGP_LPJ_T0033203.1 MGP_LPJ_G0019255.1 mouse_genomes_project 11 117952840 117964707 + MGP_LPJ_P0033203 D11Wsu47e protein_coding protein_coding MGP_LPJ_T0033204.1 MGP_LPJ_G0019255.1 mouse_genomes_project 11 117952868 117956642 + MGP_LPJ_P0033204 D11Wsu47e protein_coding protein_coding MGP_LPJ_T0033205.1 MGP_LPJ_G0019255.1 mouse_genomes_project 11 117952875 117964707 + MGP_LPJ_P0033205 D11Wsu47e protein_coding protein_coding MGP_LPJ_T0033206.1 MGP_LPJ_G0019255.1 mouse_genomes_project 11 117953514 117956557 + MGP_LPJ_P0033206 D11Wsu47e protein_coding protein_coding MGP_LPJ_T0027689.1 MGP_LPJ_G0017883.1 mouse_genomes_project 11 1127139 1132064 - MGP_LPJ_P0027689 Mtfp1 protein_coding protein_coding MGP_LPJ_T0027690.1 MGP_LPJ_G0017883.1 mouse_genomes_project 11 1130093 1130800 - Mtfp1 protein_coding processed_transcript MGP_LPJ_T0012665.1 MGP_LPJ_G0010756.1 mouse_genomes_project 11 75563513 75564435 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009670.1 MGP_LPJ_G0007788.1 mouse_genomes_project 11 21354529 21354620 - miRNA miRNA MGP_LPJ_T0032192.1 MGP_LPJ_G0019026.1 mouse_genomes_project 11 103063613 103064510 - MGP_LPJ_P0032192 Krtap4-16 protein_coding protein_coding MGP_LPJ_T0098919.1 MGP_LPJ_G0037182.1 mouse_genomes_project 11 76244463 76244554 - Gm22733 snRNA snRNA MGP_LPJ_T0029580.1 MGP_LPJ_G0018367.1 mouse_genomes_project 11 63254375 63270400 + MGP_LPJ_P0029580 Mmgt2 protein_coding protein_coding MGP_LPJ_T0029581.1 MGP_LPJ_G0018367.1 mouse_genomes_project 11 63254524 63268347 + Mmgt2 protein_coding retained_intron MGP_LPJ_T0029582.1 MGP_LPJ_G0018367.1 mouse_genomes_project 11 63254528 63270330 + Mmgt2 protein_coding processed_transcript MGP_LPJ_T0029583.1 MGP_LPJ_G0018367.1 mouse_genomes_project 11 63254531 63270262 + Mmgt2 protein_coding processed_transcript MGP_LPJ_T0029584.1 MGP_LPJ_G0018367.1 mouse_genomes_project 11 63254542 63270470 + MGP_LPJ_P0029584 Mmgt2 protein_coding protein_coding MGP_LPJ_T0029585.1 MGP_LPJ_G0018367.1 mouse_genomes_project 11 63254546 63270777 + MGP_LPJ_P0029585 Mmgt2 protein_coding protein_coding MGP_LPJ_T0029586.1 MGP_LPJ_G0018367.1 mouse_genomes_project 11 63255160 63271890 + MGP_LPJ_P0029586 Mmgt2 protein_coding protein_coding MGP_LPJ_T0098119.1 MGP_LPJ_G0036400.1 mouse_genomes_project 11 68951677 68951803 + Gm26157 rRNA rRNA MGP_LPJ_T0012534.1 MGP_LPJ_G0010625.1 mouse_genomes_project 11 27586383 27587323 - processed_pseudogene processed_pseudogene MGP_LPJ_T0030179.1 MGP_LPJ_G0018502.1 mouse_genomes_project 11 71564647 71565570 + MGP_LPJ_P0030179 Zmynd15 protein_coding protein_coding MGP_LPJ_T0030180.1 MGP_LPJ_G0018502.1 mouse_genomes_project 11 71564844 71565604 + MGP_LPJ_P0030180 Zmynd15 protein_coding protein_coding MGP_LPJ_T0030181.1 MGP_LPJ_G0018502.1 mouse_genomes_project 11 71564903 71570907 + Zmynd15 protein_coding retained_intron MGP_LPJ_T0030182.1 MGP_LPJ_G0018502.1 mouse_genomes_project 11 71565272 71570798 + MGP_LPJ_P0030182 Zmynd15 protein_coding protein_coding MGP_LPJ_T0030183.1 MGP_LPJ_G0018502.1 mouse_genomes_project 11 71565277 71570794 + MGP_LPJ_P0030183 Zmynd15 protein_coding protein_coding MGP_LPJ_T0031170.1 MGP_LPJ_G0018748.1 mouse_genomes_project 11 85177333 85211167 + MGP_LPJ_P0031170 Ap2b1 protein_coding protein_coding MGP_LPJ_T0031171.1 MGP_LPJ_G0018748.1 mouse_genomes_project 11 85180789 85292203 + MGP_LPJ_P0031171 Ap2b1 protein_coding protein_coding MGP_LPJ_T0031172.1 MGP_LPJ_G0018748.1 mouse_genomes_project 11 85181009 85223955 + Ap2b1 protein_coding retained_intron MGP_LPJ_T0031173.1 MGP_LPJ_G0018748.1 mouse_genomes_project 11 85181040 85285774 + MGP_LPJ_P0031173 Ap2b1 protein_coding protein_coding MGP_LPJ_T0031174.1 MGP_LPJ_G0018748.1 mouse_genomes_project 11 85181080 85290179 + MGP_LPJ_P0031174 Ap2b1 protein_coding protein_coding MGP_LPJ_T0031175.1 MGP_LPJ_G0018748.1 mouse_genomes_project 11 85181252 85194684 + MGP_LPJ_P0031175 Ap2b1 protein_coding protein_coding MGP_LPJ_T0031176.1 MGP_LPJ_G0018748.1 mouse_genomes_project 11 85186557 85289811 + MGP_LPJ_P0031176 Ap2b1 protein_coding protein_coding MGP_LPJ_T0034057.1 MGP_LPJ_G0019425.1 mouse_genomes_project 11 125456606 125457981 + Aspscr1 protein_coding retained_intron MGP_LPJ_T0034058.1 MGP_LPJ_G0019425.1 mouse_genomes_project 11 125456659 125460677 + Aspscr1 protein_coding retained_intron MGP_LPJ_T0034059.1 MGP_LPJ_G0019425.1 mouse_genomes_project 11 125456696 125487933 + MGP_LPJ_P0034059 Aspscr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0034060.1 MGP_LPJ_G0019425.1 mouse_genomes_project 11 125456702 125495401 + MGP_LPJ_P0034060 Aspscr1 protein_coding protein_coding MGP_LPJ_T0034061.1 MGP_LPJ_G0019425.1 mouse_genomes_project 11 125456716 125495023 + MGP_LPJ_P0034061 Aspscr1 protein_coding protein_coding MGP_LPJ_T0034062.1 MGP_LPJ_G0019425.1 mouse_genomes_project 11 125456731 125475463 + MGP_LPJ_P0034062 Aspscr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0034063.1 MGP_LPJ_G0019425.1 mouse_genomes_project 11 125456992 125475566 + MGP_LPJ_P0034063 Aspscr1 protein_coding protein_coding MGP_LPJ_T0034064.1 MGP_LPJ_G0019425.1 mouse_genomes_project 11 125457007 125475562 + MGP_LPJ_P0034064 Aspscr1 protein_coding protein_coding MGP_LPJ_T0034065.1 MGP_LPJ_G0019425.1 mouse_genomes_project 11 125457007 125463148 + MGP_LPJ_P0034065 Aspscr1 protein_coding protein_coding MGP_LPJ_T0034066.1 MGP_LPJ_G0019425.1 mouse_genomes_project 11 125457025 125475522 + MGP_LPJ_P0034066 Aspscr1 protein_coding protein_coding MGP_LPJ_T0034067.1 MGP_LPJ_G0019425.1 mouse_genomes_project 11 125457037 125473096 + MGP_LPJ_P0034067 Aspscr1 protein_coding protein_coding MGP_LPJ_T0034068.1 MGP_LPJ_G0019425.1 mouse_genomes_project 11 125461355 125495393 + MGP_LPJ_P0034068 Aspscr1 protein_coding protein_coding MGP_LPJ_T0034069.1 MGP_LPJ_G0019425.1 mouse_genomes_project 11 125461920 125463140 + MGP_LPJ_P0034069 Aspscr1 protein_coding protein_coding MGP_LPJ_T0034070.1 MGP_LPJ_G0019425.1 mouse_genomes_project 11 125462033 125475692 + MGP_LPJ_P0034070 Aspscr1 protein_coding protein_coding MGP_LPJ_T0034071.1 MGP_LPJ_G0019425.1 mouse_genomes_project 11 125473087 125495394 + MGP_LPJ_P0034071 Aspscr1 protein_coding protein_coding MGP_LPJ_T0034072.1 MGP_LPJ_G0019425.1 mouse_genomes_project 11 125475668 125495394 + MGP_LPJ_P0034072 Aspscr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0034073.1 MGP_LPJ_G0019425.1 mouse_genomes_project 11 125475704 125495192 + MGP_LPJ_P0034073 Aspscr1 protein_coding protein_coding MGP_LPJ_T0034074.1 MGP_LPJ_G0019425.1 mouse_genomes_project 11 125488882 125495395 + MGP_LPJ_P0034074 Aspscr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0034075.1 MGP_LPJ_G0019425.1 mouse_genomes_project 11 125494608 125495393 + Aspscr1 protein_coding retained_intron MGP_LPJ_T0034076.1 MGP_LPJ_G0019425.1 mouse_genomes_project 11 125494710 125495398 + Aspscr1 protein_coding retained_intron MGP_LPJ_T0034077.1 MGP_LPJ_G0019425.1 mouse_genomes_project 11 125494808 125495396 + Aspscr1 protein_coding retained_intron MGP_LPJ_T0028818.1 MGP_LPJ_G0018167.1 mouse_genomes_project 11 50524915 50527875 - MGP_LPJ_P0028818 Prop1 protein_coding protein_coding MGP_LPJ_T0028819.1 MGP_LPJ_G0018167.1 mouse_genomes_project 11 50525301 50526564 - Prop1 protein_coding retained_intron MGP_LPJ_T0028820.1 MGP_LPJ_G0018167.1 mouse_genomes_project 11 50526323 50527861 - MGP_LPJ_P0028820 Prop1 protein_coding protein_coding MGP_LPJ_T0012489.1 MGP_LPJ_G0010580.1 mouse_genomes_project 11 14651529 14651684 - processed_pseudogene processed_pseudogene MGP_LPJ_T0032345.1 MGP_LPJ_G0019076.1 mouse_genomes_project 11 104366818 104378693 + Atp6v0a1 protein_coding processed_transcript MGP_LPJ_T0032346.1 MGP_LPJ_G0019076.1 mouse_genomes_project 11 104366818 104404414 + Atp6v0a1 protein_coding processed_transcript MGP_LPJ_T0032347.1 MGP_LPJ_G0019076.1 mouse_genomes_project 11 104366818 104422043 + MGP_LPJ_P0032347 Atp6v0a1 protein_coding protein_coding MGP_LPJ_T0032348.1 MGP_LPJ_G0019076.1 mouse_genomes_project 11 104366818 104423338 + MGP_LPJ_P0032348 Atp6v0a1 protein_coding protein_coding MGP_LPJ_T0032349.1 MGP_LPJ_G0019076.1 mouse_genomes_project 11 104366853 104423332 + MGP_LPJ_P0032349 Atp6v0a1 protein_coding protein_coding MGP_LPJ_T0032350.1 MGP_LPJ_G0019076.1 mouse_genomes_project 11 104368023 104377798 + MGP_LPJ_P0032350 Atp6v0a1 protein_coding protein_coding MGP_LPJ_T0032351.1 MGP_LPJ_G0019076.1 mouse_genomes_project 11 104369187 104423338 + MGP_LPJ_P0032351 Atp6v0a1 protein_coding protein_coding MGP_LPJ_T0032352.1 MGP_LPJ_G0019076.1 mouse_genomes_project 11 104378419 104385733 + Atp6v0a1 protein_coding processed_transcript MGP_LPJ_T0032353.1 MGP_LPJ_G0019076.1 mouse_genomes_project 11 104399436 104408856 + Atp6v0a1 protein_coding processed_transcript MGP_LPJ_T0032354.1 MGP_LPJ_G0019076.1 mouse_genomes_project 11 104403405 104404417 + Atp6v0a1 protein_coding processed_transcript MGP_LPJ_T0012468.1 MGP_LPJ_G0010559.1 mouse_genomes_project 11 3995370 3996831 - processed_pseudogene processed_pseudogene MGP_LPJ_T0032474.1 MGP_LPJ_G0019106.1 mouse_genomes_project 11 104872580 104879068 + Rnd2 protein_coding processed_transcript MGP_LPJ_T0032475.1 MGP_LPJ_G0019106.1 mouse_genomes_project 11 104873065 104878320 + Rnd2 protein_coding processed_transcript MGP_LPJ_T0032476.1 MGP_LPJ_G0019106.1 mouse_genomes_project 11 104875652 104879068 + MGP_LPJ_P0032476 Rnd2 protein_coding protein_coding MGP_LPJ_T0028530.1 MGP_LPJ_G0018081.1 mouse_genomes_project 11 42445440 42449972 + MGP_LPJ_P0028530 Slu7 protein_coding protein_coding MGP_LPJ_T0028531.1 MGP_LPJ_G0018081.1 mouse_genomes_project 11 42445440 42457094 + MGP_LPJ_P0028531 Slu7 protein_coding protein_coding MGP_LPJ_T0028532.1 MGP_LPJ_G0018081.1 mouse_genomes_project 11 42445455 42459690 + MGP_LPJ_P0028532 Slu7 protein_coding protein_coding MGP_LPJ_T0028533.1 MGP_LPJ_G0018081.1 mouse_genomes_project 11 42449038 42459690 + MGP_LPJ_P0028533 Slu7 protein_coding protein_coding MGP_LPJ_T0028534.1 MGP_LPJ_G0018081.1 mouse_genomes_project 11 42449070 42450905 + Slu7 protein_coding processed_transcript MGP_LPJ_T0028535.1 MGP_LPJ_G0018081.1 mouse_genomes_project 11 42453115 42454341 + Slu7 protein_coding processed_transcript MGP_LPJ_T0029216.1 MGP_LPJ_G0018291.1 mouse_genomes_project 11 59328816 59336610 - MGP_LPJ_P0029216 protein_coding protein_coding MGP_LPJ_T0028432.1 MGP_LPJ_G0018057.1 mouse_genomes_project 11 32211272 32264492 - MGP_LPJ_P0028432 Kcnip1 protein_coding protein_coding MGP_LPJ_T0028433.1 MGP_LPJ_G0018057.1 mouse_genomes_project 11 32211280 32452279 - MGP_LPJ_P0028433 Kcnip1 protein_coding protein_coding MGP_LPJ_T0028434.1 MGP_LPJ_G0018057.1 mouse_genomes_project 11 32211280 32452337 - MGP_LPJ_P0028434 Kcnip1 protein_coding protein_coding MGP_LPJ_T0028435.1 MGP_LPJ_G0018057.1 mouse_genomes_project 11 32222670 32597990 - Kcnip1 protein_coding processed_transcript MGP_LPJ_T0028436.1 MGP_LPJ_G0018057.1 mouse_genomes_project 11 32222994 32597826 - Kcnip1 protein_coding processed_transcript MGP_LPJ_T0027745.1 MGP_LPJ_G0017898.1 mouse_genomes_project 11 1811408 1821325 - MGP_LPJ_P0027745 Cabp7 protein_coding protein_coding MGP_LPJ_T0032030.1 MGP_LPJ_G0018962.1 mouse_genomes_project 11 101407570 101412151 - Pgap3 protein_coding processed_transcript MGP_LPJ_T0032031.1 MGP_LPJ_G0018962.1 mouse_genomes_project 11 101407570 101420412 - MGP_LPJ_P0032031 Pgap3 protein_coding protein_coding MGP_LPJ_T0032032.1 MGP_LPJ_G0018962.1 mouse_genomes_project 11 101408515 101420357 - MGP_LPJ_P0032032 Pgap3 protein_coding protein_coding MGP_LPJ_T0032033.1 MGP_LPJ_G0018962.1 mouse_genomes_project 11 101411400 101420336 - Pgap3 protein_coding processed_transcript MGP_LPJ_T0032034.1 MGP_LPJ_G0018962.1 mouse_genomes_project 11 101418473 101420359 - Pgap3 protein_coding processed_transcript MGP_LPJ_T0098949.1 MGP_LPJ_G0037212.1 mouse_genomes_project 11 106063316 106063420 - Gm25337 snRNA snRNA MGP_LPJ_T0012588.1 MGP_LPJ_G0010679.1 mouse_genomes_project 11 49867316 49867578 + processed_pseudogene processed_pseudogene MGP_LPJ_T0030789.1 MGP_LPJ_G0018652.1 mouse_genomes_project 11 78977380 78982642 - MGP_LPJ_P0030789 Trp53i13 protein_coding protein_coding MGP_LPJ_T0030790.1 MGP_LPJ_G0018652.1 mouse_genomes_project 11 78977892 78982045 - Trp53i13 protein_coding processed_transcript MGP_LPJ_T0030791.1 MGP_LPJ_G0018652.1 mouse_genomes_project 11 78978251 78982317 - Trp53i13 protein_coding processed_transcript MGP_LPJ_T0030792.1 MGP_LPJ_G0018652.1 mouse_genomes_project 11 78978382 78984944 - MGP_LPJ_P0030792 Trp53i13 protein_coding protein_coding MGP_LPJ_T0030793.1 MGP_LPJ_G0018652.1 mouse_genomes_project 11 78982025 78985193 - Trp53i13 protein_coding processed_transcript MGP_LPJ_T0009711.1 MGP_LPJ_G0007829.1 mouse_genomes_project 11 70687012 70687095 + Mir1934 miRNA miRNA MGP_LPJ_T0031482.1 MGP_LPJ_G0018824.1 mouse_genomes_project 11 90264775 90281232 + MGP_LPJ_P0031482 Vezf1 protein_coding protein_coding MGP_LPJ_T0031483.1 MGP_LPJ_G0018824.1 mouse_genomes_project 11 90270083 90281232 + MGP_LPJ_P0031483 Vezf1 protein_coding protein_coding MGP_LPJ_T0012469.1 MGP_LPJ_G0010560.1 mouse_genomes_project 11 4040548 4040862 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003172.1 MGP_LPJ_G0002945.1 mouse_genomes_project 11 49631840 49632763 - Gm12195 antisense antisense MGP_LPJ_T0030492.1 MGP_LPJ_G0018578.1 mouse_genomes_project 11 75026204 75028967 - MGP_LPJ_P0030492 Olfr392 protein_coding protein_coding MGP_LPJ_T0030493.1 MGP_LPJ_G0018578.1 mouse_genomes_project 11 75026818 75028964 - MGP_LPJ_P0030493 Olfr392 protein_coding protein_coding MGP_LPJ_T0012520.1 MGP_LPJ_G0010611.1 mouse_genomes_project 11 20608965 20609402 - processed_pseudogene processed_pseudogene MGP_LPJ_T0032913.1 MGP_LPJ_G0019189.1 mouse_genomes_project 11 109650858 109661298 - MGP_LPJ_P0032913 Cyb561 protein_coding protein_coding MGP_LPJ_T0032914.1 MGP_LPJ_G0019189.1 mouse_genomes_project 11 109652248 109661285 - MGP_LPJ_P0032914 Cyb561 protein_coding protein_coding MGP_LPJ_T0032915.1 MGP_LPJ_G0019189.1 mouse_genomes_project 11 109652653 109653342 - Cyb561 protein_coding processed_transcript MGP_LPJ_T0032916.1 MGP_LPJ_G0019189.1 mouse_genomes_project 11 109652963 109671206 - MGP_LPJ_P0032916 Cyb561 protein_coding protein_coding MGP_LPJ_T0032917.1 MGP_LPJ_G0019189.1 mouse_genomes_project 11 109653374 109661575 - MGP_LPJ_P0032917 Cyb561 protein_coding protein_coding MGP_LPJ_T0032918.1 MGP_LPJ_G0019189.1 mouse_genomes_project 11 109653719 109661633 - MGP_LPJ_P0032918 Cyb561 protein_coding protein_coding MGP_LPJ_T0028661.1 MGP_LPJ_G0018122.1 mouse_genomes_project 11 48429563 48439345 - MGP_LPJ_P0028661 Tgtp1 protein_coding protein_coding MGP_LPJ_T0033468.1 MGP_LPJ_G0019308.1 mouse_genomes_project 11 120368778 120370682 + MGP_LPJ_P0033468 Smim6 protein_coding protein_coding MGP_LPJ_T0028596.1 MGP_LPJ_G0018101.1 mouse_genomes_project 11 45487678 45554237 - MGP_LPJ_P0028596 Itk protein_coding protein_coding MGP_LPJ_T0028597.1 MGP_LPJ_G0018101.1 mouse_genomes_project 11 45487678 45554259 - MGP_LPJ_P0028597 Itk protein_coding protein_coding MGP_LPJ_T0028598.1 MGP_LPJ_G0018101.1 mouse_genomes_project 11 45508189 45554201 - MGP_LPJ_P0028598 Itk protein_coding protein_coding MGP_LPJ_T0028599.1 MGP_LPJ_G0018101.1 mouse_genomes_project 11 45528333 45554205 - Itk protein_coding retained_intron MGP_LPJ_T0006246.1 MGP_LPJ_G0005217.1 mouse_genomes_project 11 43334961 43337906 - lincRNA lincRNA MGP_LPJ_T0028462.1 MGP_LPJ_G0018066.1 mouse_genomes_project 11 34417896 34419399 - MGP_LPJ_P0028462 Fbll1 protein_coding protein_coding MGP_LPJ_T0029504.1 MGP_LPJ_G0018355.1 mouse_genomes_project 11 62274802 62311281 - MGP_LPJ_P0029504 Prpsap2 protein_coding protein_coding MGP_LPJ_T0029505.1 MGP_LPJ_G0018355.1 mouse_genomes_project 11 62274805 62311255 - MGP_LPJ_P0029505 Prpsap2 protein_coding protein_coding MGP_LPJ_T0029506.1 MGP_LPJ_G0018355.1 mouse_genomes_project 11 62274806 62311205 - Prpsap2 protein_coding processed_transcript MGP_LPJ_T0029507.1 MGP_LPJ_G0018355.1 mouse_genomes_project 11 62303642 62311233 - Prpsap2 protein_coding processed_transcript MGP_LPJ_T0028087.1 MGP_LPJ_G0017978.1 mouse_genomes_project 11 18399054 18457424 - MGP_LPJ_P0028087 Aftph protein_coding protein_coding MGP_LPJ_T0028088.1 MGP_LPJ_G0017978.1 mouse_genomes_project 11 18399054 18443411 - MGP_LPJ_P0028088 Aftph protein_coding protein_coding MGP_LPJ_T0028089.1 MGP_LPJ_G0017978.1 mouse_genomes_project 11 18399687 18442946 - MGP_LPJ_P0028089 Aftph protein_coding nonsense_mediated_decay MGP_LPJ_T0028090.1 MGP_LPJ_G0017978.1 mouse_genomes_project 11 18399713 18457287 - MGP_LPJ_P0028090 Aftph protein_coding protein_coding MGP_LPJ_T0028091.1 MGP_LPJ_G0017978.1 mouse_genomes_project 11 18399952 18406788 - Aftph protein_coding retained_intron MGP_LPJ_T0028092.1 MGP_LPJ_G0017978.1 mouse_genomes_project 11 18400089 18441976 - MGP_LPJ_P0028092 Aftph protein_coding protein_coding MGP_LPJ_T0028093.1 MGP_LPJ_G0017978.1 mouse_genomes_project 11 18409997 18425937 - Aftph protein_coding retained_intron MGP_LPJ_T0028094.1 MGP_LPJ_G0017978.1 mouse_genomes_project 11 18417178 18425863 - Aftph protein_coding retained_intron MGP_LPJ_T0028095.1 MGP_LPJ_G0017978.1 mouse_genomes_project 11 18422238 18425843 - Aftph protein_coding retained_intron MGP_LPJ_T0031349.1 MGP_LPJ_G0018792.1 mouse_genomes_project 11 88532640 88549476 + MGP_LPJ_P0031349 Rnft1 protein_coding protein_coding MGP_LPJ_T0031350.1 MGP_LPJ_G0018792.1 mouse_genomes_project 11 88532668 88540865 + Rnft1 protein_coding processed_transcript MGP_LPJ_T0031351.1 MGP_LPJ_G0018792.1 mouse_genomes_project 11 88532713 88534089 + Rnft1 protein_coding processed_transcript MGP_LPJ_T0030798.1 MGP_LPJ_G0018655.1 mouse_genomes_project 11 79007068 79084163 - MGP_LPJ_P0030798 Taok1 protein_coding unknown_likely_coding MGP_LPJ_T0032066.1 MGP_LPJ_G0018972.1 mouse_genomes_project 11 101735387 101748330 + MGP_LPJ_P0032066 Psmd3 protein_coding protein_coding MGP_LPJ_T0032067.1 MGP_LPJ_G0018972.1 mouse_genomes_project 11 101735398 101744865 + Psmd3 protein_coding retained_intron MGP_LPJ_T0032068.1 MGP_LPJ_G0018972.1 mouse_genomes_project 11 101735424 101747392 + Psmd3 protein_coding retained_intron MGP_LPJ_T0032069.1 MGP_LPJ_G0018972.1 mouse_genomes_project 11 101740622 101746182 + MGP_LPJ_P0032069 Psmd3 protein_coding protein_coding MGP_LPJ_T0032070.1 MGP_LPJ_G0018972.1 mouse_genomes_project 11 101742808 101743817 + Psmd3 protein_coding retained_intron MGP_LPJ_T0006364.1 MGP_LPJ_G0005305.1 mouse_genomes_project 11 111362191 111378051 - C330019F10Rik lincRNA lincRNA MGP_LPJ_T0098943.1 MGP_LPJ_G0037206.1 mouse_genomes_project 11 101499277 101499411 - Gm25106 snRNA snRNA MGP_LPJ_T0017154.1 MGP_LPJ_G0015098.1 mouse_genomes_project 11 76798181 76803319 + Mir22hg processed_transcript processed_transcript MGP_LPJ_T0017155.1 MGP_LPJ_G0015098.1 mouse_genomes_project 11 76798286 76800672 + Mir22hg processed_transcript processed_transcript MGP_LPJ_T0028625.1 MGP_LPJ_G0018110.1 mouse_genomes_project 11 46007237 46045333 + MGP_LPJ_P0028625 Timd4 protein_coding protein_coding MGP_LPJ_T0030899.1 MGP_LPJ_G0018674.1 mouse_genomes_project 11 79772115 79782772 + MGP_LPJ_P0030899 Sdf2 protein_coding protein_coding MGP_LPJ_T0030900.1 MGP_LPJ_G0018674.1 mouse_genomes_project 11 79777688 79782772 + Sdf2 protein_coding processed_transcript MGP_LPJ_T0030901.1 MGP_LPJ_G0018674.1 mouse_genomes_project 11 79778161 79782393 + Sdf2 protein_coding retained_intron MGP_LPJ_T0006363.1 MGP_LPJ_G0005304.1 mouse_genomes_project 11 110761298 110762324 - Gm11707 lincRNA lincRNA MGP_LPJ_T0034051.1 MGP_LPJ_G0019423.1 mouse_genomes_project 11 125427694 125429822 - MGP_LPJ_P0034051 Myadml2 protein_coding protein_coding MGP_LPJ_T0034052.1 MGP_LPJ_G0019423.1 mouse_genomes_project 11 125427695 125428746 - Myadml2 protein_coding processed_transcript MGP_LPJ_T0029327.1 MGP_LPJ_G0018322.1 mouse_genomes_project 11 60671590 60693121 - MGP_LPJ_P0029327 Srebf1 protein_coding protein_coding MGP_LPJ_T0029328.1 MGP_LPJ_G0018322.1 mouse_genomes_project 11 60672423 60679752 - MGP_LPJ_P0029328 Srebf1 protein_coding protein_coding MGP_LPJ_T0029329.1 MGP_LPJ_G0018322.1 mouse_genomes_project 11 60672631 60673541 - Srebf1 protein_coding processed_transcript MGP_LPJ_T0029330.1 MGP_LPJ_G0018322.1 mouse_genomes_project 11 60672963 60682962 - MGP_LPJ_P0029330 Srebf1 protein_coding protein_coding MGP_LPJ_T0029331.1 MGP_LPJ_G0018322.1 mouse_genomes_project 11 60673864 60674716 - Srebf1 protein_coding processed_transcript MGP_LPJ_T0029332.1 MGP_LPJ_G0018322.1 mouse_genomes_project 11 60673866 60675125 - Srebf1 protein_coding processed_transcript MGP_LPJ_T0029333.1 MGP_LPJ_G0018322.1 mouse_genomes_project 11 60674301 60676358 - Srebf1 protein_coding processed_transcript MGP_LPJ_T0029334.1 MGP_LPJ_G0018322.1 mouse_genomes_project 11 60675159 60675989 - Srebf1 protein_coding processed_transcript MGP_LPJ_T0029335.1 MGP_LPJ_G0018322.1 mouse_genomes_project 11 60675601 60676791 - Srebf1 protein_coding processed_transcript MGP_LPJ_T0029336.1 MGP_LPJ_G0018322.1 mouse_genomes_project 11 60676689 60678611 - Srebf1 protein_coding processed_transcript MGP_LPJ_T0029337.1 MGP_LPJ_G0018322.1 mouse_genomes_project 11 60678457 60682889 - Srebf1 protein_coding processed_transcript MGP_LPJ_T0029338.1 MGP_LPJ_G0018322.1 mouse_genomes_project 11 60679446 60695102 - Srebf1 protein_coding processed_transcript MGP_LPJ_T0098907.1 MGP_LPJ_G0037170.1 mouse_genomes_project 11 61231095 61231192 + Gm23341 snRNA snRNA MGP_LPJ_T0031717.1 MGP_LPJ_G0018884.1 mouse_genomes_project 11 98032131 98071619 - MGP_LPJ_P0031717 Kat7 protein_coding protein_coding MGP_LPJ_T0031718.1 MGP_LPJ_G0018884.1 mouse_genomes_project 11 98032131 98072218 - MGP_LPJ_P0031718 Kat7 protein_coding protein_coding MGP_LPJ_T0031719.1 MGP_LPJ_G0018884.1 mouse_genomes_project 11 98032131 98072263 - MGP_LPJ_P0031719 Kat7 protein_coding protein_coding MGP_LPJ_T0031720.1 MGP_LPJ_G0018884.1 mouse_genomes_project 11 98032131 98072263 - MGP_LPJ_P0031720 Kat7 protein_coding protein_coding MGP_LPJ_T0031721.1 MGP_LPJ_G0018884.1 mouse_genomes_project 11 98032131 98071619 - MGP_LPJ_P0031721 Kat7 protein_coding protein_coding MGP_LPJ_T0031722.1 MGP_LPJ_G0018884.1 mouse_genomes_project 11 98033195 98039767 - MGP_LPJ_P0031722 Kat7 protein_coding protein_coding MGP_LPJ_T0031723.1 MGP_LPJ_G0018884.1 mouse_genomes_project 11 98039774 98072206 - Kat7 protein_coding processed_transcript MGP_LPJ_T0031724.1 MGP_LPJ_G0018884.1 mouse_genomes_project 11 98042013 98049617 - Kat7 protein_coding processed_transcript MGP_LPJ_T0031725.1 MGP_LPJ_G0018884.1 mouse_genomes_project 11 98063574 98072225 - Kat7 protein_coding processed_transcript MGP_LPJ_T0031726.1 MGP_LPJ_G0018884.1 mouse_genomes_project 11 98065216 98071530 - Kat7 protein_coding processed_transcript MGP_LPJ_T0031727.1 MGP_LPJ_G0018884.1 mouse_genomes_project 11 98068128 98071586 - Kat7 protein_coding processed_transcript MGP_LPJ_T0033957.1 MGP_LPJ_G0019404.1 mouse_genomes_project 11 125211938 125218141 - Pde6g protein_coding processed_transcript MGP_LPJ_T0033958.1 MGP_LPJ_G0019404.1 mouse_genomes_project 11 125211957 125218159 - Pde6g protein_coding processed_transcript MGP_LPJ_T0033959.1 MGP_LPJ_G0019404.1 mouse_genomes_project 11 125211959 125218207 - MGP_LPJ_P0033959 Pde6g protein_coding protein_coding MGP_LPJ_T0033768.1 MGP_LPJ_G0019366.1 mouse_genomes_project 11 122934961 122994244 - MGP_LPJ_P0033768 Timp2 protein_coding protein_coding MGP_LPJ_T0031586.1 MGP_LPJ_G0018853.1 mouse_genomes_project 11 96596339 96645399 + Spag9 protein_coding processed_transcript MGP_LPJ_T0031587.1 MGP_LPJ_G0018853.1 mouse_genomes_project 11 96596351 96652415 + Spag9 protein_coding processed_transcript MGP_LPJ_T0031588.1 MGP_LPJ_G0018853.1 mouse_genomes_project 11 96596351 96727849 + MGP_LPJ_P0031588 Spag9 protein_coding protein_coding MGP_LPJ_T0031589.1 MGP_LPJ_G0018853.1 mouse_genomes_project 11 96645340 96698730 + MGP_LPJ_P0031589 Spag9 protein_coding protein_coding MGP_LPJ_T0031590.1 MGP_LPJ_G0018853.1 mouse_genomes_project 11 96645888 96707585 + MGP_LPJ_P0031590 Spag9 protein_coding protein_coding MGP_LPJ_T0031591.1 MGP_LPJ_G0018853.1 mouse_genomes_project 11 96645960 96662108 + Spag9 protein_coding processed_transcript MGP_LPJ_T0031592.1 MGP_LPJ_G0018853.1 mouse_genomes_project 11 96645975 96727844 + MGP_LPJ_P0031592 Spag9 protein_coding protein_coding MGP_LPJ_T0031593.1 MGP_LPJ_G0018853.1 mouse_genomes_project 11 96645975 96727844 + MGP_LPJ_P0031593 Spag9 protein_coding protein_coding MGP_LPJ_T0031594.1 MGP_LPJ_G0018853.1 mouse_genomes_project 11 96646038 96727849 + MGP_LPJ_P0031594 Spag9 protein_coding protein_coding MGP_LPJ_T0031595.1 MGP_LPJ_G0018853.1 mouse_genomes_project 11 96646135 96727847 + MGP_LPJ_P0031595 Spag9 protein_coding protein_coding MGP_LPJ_T0031596.1 MGP_LPJ_G0018853.1 mouse_genomes_project 11 96672898 96695094 + Spag9 protein_coding processed_transcript MGP_LPJ_T0031597.1 MGP_LPJ_G0018853.1 mouse_genomes_project 11 96683819 96727849 + MGP_LPJ_P0031597 Spag9 protein_coding protein_coding MGP_LPJ_T0029937.1 MGP_LPJ_G0018452.1 mouse_genomes_project 11 70698677 70709421 - MGP_LPJ_P0029937 Senp3 protein_coding protein_coding MGP_LPJ_T0029938.1 MGP_LPJ_G0018452.1 mouse_genomes_project 11 70698678 70700539 - Senp3 protein_coding retained_intron MGP_LPJ_T0029939.1 MGP_LPJ_G0018452.1 mouse_genomes_project 11 70698683 70709659 - MGP_LPJ_P0029939 Senp3 protein_coding protein_coding MGP_LPJ_T0029940.1 MGP_LPJ_G0018452.1 mouse_genomes_project 11 70698837 70703586 - Senp3 protein_coding retained_intron MGP_LPJ_T0029941.1 MGP_LPJ_G0018452.1 mouse_genomes_project 11 70698903 70704154 - MGP_LPJ_P0029941 Senp3 protein_coding protein_coding MGP_LPJ_T0029942.1 MGP_LPJ_G0018452.1 mouse_genomes_project 11 70699515 70700006 - Senp3 protein_coding retained_intron MGP_LPJ_T0029943.1 MGP_LPJ_G0018452.1 mouse_genomes_project 11 70699795 70702510 - Senp3 protein_coding processed_transcript MGP_LPJ_T0029944.1 MGP_LPJ_G0018452.1 mouse_genomes_project 11 70702610 70703480 - Senp3 protein_coding retained_intron MGP_LPJ_T0029945.1 MGP_LPJ_G0018452.1 mouse_genomes_project 11 70703623 70704662 - Senp3 protein_coding retained_intron MGP_LPJ_T0012606.1 MGP_LPJ_G0010697.1 mouse_genomes_project 11 55090249 55090492 + processed_pseudogene processed_pseudogene MGP_LPJ_T0029025.1 MGP_LPJ_G0018224.1 mouse_genomes_project 11 54224365 54289101 + MGP_LPJ_P0029025 Acsl6 protein_coding protein_coding MGP_LPJ_T0029026.1 MGP_LPJ_G0018224.1 mouse_genomes_project 11 54224572 54285863 + MGP_LPJ_P0029026 Acsl6 protein_coding protein_coding MGP_LPJ_T0029027.1 MGP_LPJ_G0018224.1 mouse_genomes_project 11 54224589 54248364 + MGP_LPJ_P0029027 Acsl6 protein_coding protein_coding MGP_LPJ_T0029028.1 MGP_LPJ_G0018224.1 mouse_genomes_project 11 54224769 54289097 + MGP_LPJ_P0029028 Acsl6 protein_coding protein_coding MGP_LPJ_T0029029.1 MGP_LPJ_G0018224.1 mouse_genomes_project 11 54224769 54285867 + MGP_LPJ_P0029029 Acsl6 protein_coding protein_coding MGP_LPJ_T0029030.1 MGP_LPJ_G0018224.1 mouse_genomes_project 11 54234239 54247817 + MGP_LPJ_P0029030 Acsl6 protein_coding protein_coding MGP_LPJ_T0029031.1 MGP_LPJ_G0018224.1 mouse_genomes_project 11 54235498 54285525 + MGP_LPJ_P0029031 Acsl6 protein_coding protein_coding MGP_LPJ_T0029032.1 MGP_LPJ_G0018224.1 mouse_genomes_project 11 54235538 54285863 + MGP_LPJ_P0029032 Acsl6 protein_coding protein_coding MGP_LPJ_T0029033.1 MGP_LPJ_G0018224.1 mouse_genomes_project 11 54235538 54285863 + MGP_LPJ_P0029033 Acsl6 protein_coding protein_coding MGP_LPJ_T0029034.1 MGP_LPJ_G0018224.1 mouse_genomes_project 11 54235590 54262020 + MGP_LPJ_P0029034 Acsl6 protein_coding protein_coding MGP_LPJ_T0029035.1 MGP_LPJ_G0018224.1 mouse_genomes_project 11 54235590 54260455 + MGP_LPJ_P0029035 Acsl6 protein_coding protein_coding MGP_LPJ_T0029036.1 MGP_LPJ_G0018224.1 mouse_genomes_project 11 54240476 54285829 + MGP_LPJ_P0029036 Acsl6 protein_coding protein_coding MGP_LPJ_T0029037.1 MGP_LPJ_G0018224.1 mouse_genomes_project 11 54240772 54261798 + MGP_LPJ_P0029037 Acsl6 protein_coding protein_coding MGP_LPJ_T0029038.1 MGP_LPJ_G0018224.1 mouse_genomes_project 11 54258224 54285867 + Acsl6 protein_coding processed_transcript MGP_LPJ_T0029039.1 MGP_LPJ_G0018224.1 mouse_genomes_project 11 54268590 54285856 + MGP_LPJ_P0029039 Acsl6 protein_coding protein_coding MGP_LPJ_T0030229.1 MGP_LPJ_G0018513.1 mouse_genomes_project 11 71771067 71771939 + Rnf167 protein_coding processed_transcript MGP_LPJ_T0030230.1 MGP_LPJ_G0018513.1 mouse_genomes_project 11 71771119 71775248 + MGP_LPJ_P0030230 Rnf167 protein_coding protein_coding MGP_LPJ_T0030231.1 MGP_LPJ_G0018513.1 mouse_genomes_project 11 71771119 71775239 + MGP_LPJ_P0030231 Rnf167 protein_coding nonsense_mediated_decay MGP_LPJ_T0030232.1 MGP_LPJ_G0018513.1 mouse_genomes_project 11 71771387 71773598 + MGP_LPJ_P0030232 Rnf167 protein_coding nonsense_mediated_decay MGP_LPJ_T0030233.1 MGP_LPJ_G0018513.1 mouse_genomes_project 11 71771393 71775237 + Rnf167 protein_coding retained_intron MGP_LPJ_T0030234.1 MGP_LPJ_G0018513.1 mouse_genomes_project 11 71771401 71772087 + Rnf167 protein_coding retained_intron MGP_LPJ_T0030235.1 MGP_LPJ_G0018513.1 mouse_genomes_project 11 71771775 71774167 + Rnf167 protein_coding retained_intron MGP_LPJ_T0030236.1 MGP_LPJ_G0018513.1 mouse_genomes_project 11 71771907 71774918 + Rnf167 protein_coding retained_intron MGP_LPJ_T0030237.1 MGP_LPJ_G0018513.1 mouse_genomes_project 11 71772954 71773365 + Rnf167 protein_coding retained_intron MGP_LPJ_T0030238.1 MGP_LPJ_G0018513.1 mouse_genomes_project 11 71773768 71774167 + Rnf167 protein_coding retained_intron MGP_LPJ_T0027859.1 MGP_LPJ_G0017922.1 mouse_genomes_project 11 3067040 3083802 - MGP_LPJ_P0027859 Gck protein_coding protein_coding MGP_LPJ_T0027860.1 MGP_LPJ_G0017922.1 mouse_genomes_project 11 3067040 3083802 - MGP_LPJ_P0027860 Gck protein_coding protein_coding MGP_LPJ_T0027861.1 MGP_LPJ_G0017922.1 mouse_genomes_project 11 3067043 3119602 - MGP_LPJ_P0027861 Gck protein_coding protein_coding MGP_LPJ_T0027862.1 MGP_LPJ_G0017922.1 mouse_genomes_project 11 3067789 3068308 - MGP_LPJ_P0027862 Gck protein_coding protein_coding MGP_LPJ_T0009718.1 MGP_LPJ_G0007836.1 mouse_genomes_project 11 71542161 71542225 + Mir7115 miRNA miRNA MGP_LPJ_T0098921.1 MGP_LPJ_G0037184.1 mouse_genomes_project 11 80391967 80392054 + Gm23219 snRNA snRNA MGP_LPJ_T0029190.1 MGP_LPJ_G0018274.1 mouse_genomes_project 11 58914929 58915901 - MGP_LPJ_P0029190 Olfr323 protein_coding protein_coding MGP_LPJ_T0029191.1 MGP_LPJ_G0018274.1 mouse_genomes_project 11 58914929 58915898 - MGP_LPJ_P0029191 Olfr323 protein_coding protein_coding MGP_LPJ_T0009712.1 MGP_LPJ_G0007830.1 mouse_genomes_project 11 70941119 70941182 - Mir6924 miRNA miRNA MGP_LPJ_T0009757.1 MGP_LPJ_G0007875.1 mouse_genomes_project 11 101241970 101242048 + Gm27399 miRNA miRNA MGP_LPJ_T0030255.1 MGP_LPJ_G0018517.1 mouse_genomes_project 11 71794989 71813486 - MGP_LPJ_P0030255 Camta2 protein_coding protein_coding MGP_LPJ_T0030256.1 MGP_LPJ_G0018517.1 mouse_genomes_project 11 71794989 71813457 - MGP_LPJ_P0030256 Camta2 protein_coding protein_coding MGP_LPJ_T0030257.1 MGP_LPJ_G0018517.1 mouse_genomes_project 11 71794989 71813619 - MGP_LPJ_P0030257 Camta2 protein_coding protein_coding MGP_LPJ_T0030258.1 MGP_LPJ_G0018517.1 mouse_genomes_project 11 71794989 71811903 - MGP_LPJ_P0030258 Camta2 protein_coding nonsense_mediated_decay MGP_LPJ_T0030259.1 MGP_LPJ_G0018517.1 mouse_genomes_project 11 71794989 71813467 - MGP_LPJ_P0030259 Camta2 protein_coding protein_coding MGP_LPJ_T0030260.1 MGP_LPJ_G0018517.1 mouse_genomes_project 11 71794989 71813457 - MGP_LPJ_P0030260 Camta2 protein_coding protein_coding MGP_LPJ_T0030261.1 MGP_LPJ_G0018517.1 mouse_genomes_project 11 71794990 71813469 - MGP_LPJ_P0030261 Camta2 protein_coding protein_coding MGP_LPJ_T0030262.1 MGP_LPJ_G0018517.1 mouse_genomes_project 11 71794992 71809290 - Camta2 protein_coding retained_intron MGP_LPJ_T0030263.1 MGP_LPJ_G0018517.1 mouse_genomes_project 11 71811427 71813462 - Camta2 protein_coding retained_intron MGP_LPJ_T0009668.1 MGP_LPJ_G0007786.1 mouse_genomes_project 11 19094281 19094369 - Mir1933 miRNA miRNA MGP_LPJ_T0012758.1 MGP_LPJ_G0010849.1 mouse_genomes_project 11 112942256 112943387 + processed_pseudogene processed_pseudogene MGP_LPJ_T0031805.1 MGP_LPJ_G0018911.1 mouse_genomes_project 11 99172527 99196941 + MGP_LPJ_P0031805 Hoxb3 protein_coding protein_coding MGP_LPJ_T0031806.1 MGP_LPJ_G0018911.1 mouse_genomes_project 11 99177265 99193314 + MGP_LPJ_P0031806 Hoxb3 protein_coding protein_coding MGP_LPJ_T0031807.1 MGP_LPJ_G0018911.1 mouse_genomes_project 11 99189993 99190785 + Hoxb3 protein_coding processed_transcript MGP_LPJ_T0031808.1 MGP_LPJ_G0018911.1 mouse_genomes_project 11 99192779 99195518 + MGP_LPJ_P0031808 Hoxb3 protein_coding protein_coding MGP_LPJ_T0031699.1 MGP_LPJ_G0018878.1 mouse_genomes_project 11 97755098 97773290 + MGP_LPJ_P0031699 Samd14 protein_coding protein_coding MGP_LPJ_T0031700.1 MGP_LPJ_G0018878.1 mouse_genomes_project 11 97755101 97768843 + Samd14 protein_coding processed_transcript MGP_LPJ_T0031701.1 MGP_LPJ_G0018878.1 mouse_genomes_project 11 97755473 97767340 + MGP_LPJ_P0031701 Samd14 protein_coding protein_coding MGP_LPJ_T0006387.1 MGP_LPJ_G0005323.1 mouse_genomes_project 11 121565987 121572169 - Gm11728 lincRNA lincRNA MGP_LPJ_T0006388.1 MGP_LPJ_G0005323.1 mouse_genomes_project 11 121569215 121572164 - Gm11728 lincRNA lincRNA MGP_LPJ_T0031758.1 MGP_LPJ_G0018894.1 mouse_genomes_project 11 98630912 98647064 - MGP_LPJ_P0031758 Abi3 protein_coding protein_coding MGP_LPJ_T0031760.1 MGP_LPJ_G0018894.1 mouse_genomes_project 11 98634587 98647131 - Abi3 protein_coding processed_transcript MGP_LPJ_T0031761.1 MGP_LPJ_G0018894.1 mouse_genomes_project 11 98635332 98640545 - MGP_LPJ_P0031761 Abi3 protein_coding protein_coding MGP_LPJ_T0031762.1 MGP_LPJ_G0018894.1 mouse_genomes_project 11 98641731 98646753 - Abi3 protein_coding processed_transcript MGP_LPJ_T0003337.1 MGP_LPJ_G0003079.1 mouse_genomes_project 11 109786681 109787866 - Taco1os antisense antisense MGP_LPJ_T0029152.1 MGP_LPJ_G0018258.1 mouse_genomes_project 11 58509844 58528178 + MGP_LPJ_P0029152 protein_coding protein_coding MGP_LPJ_T0028508.1 MGP_LPJ_G0018076.1 mouse_genomes_project 11 41249041 41263536 - MGP_LPJ_P0028508 Gabra6 protein_coding protein_coding MGP_LPJ_T0028509.1 MGP_LPJ_G0018076.1 mouse_genomes_project 11 41249042 41263538 - MGP_LPJ_P0028509 Gabra6 protein_coding protein_coding MGP_LPJ_T0028510.1 MGP_LPJ_G0018076.1 mouse_genomes_project 11 41249864 41263559 - MGP_LPJ_P0028510 Gabra6 protein_coding protein_coding MGP_LPJ_T0031291.1 MGP_LPJ_G0018780.1 mouse_genomes_project 11 86943550 86948368 + Car4 protein_coding retained_intron MGP_LPJ_T0031292.1 MGP_LPJ_G0018780.1 mouse_genomes_project 11 86943552 86951884 + MGP_LPJ_P0031292 Car4 protein_coding protein_coding MGP_LPJ_T0031293.1 MGP_LPJ_G0018780.1 mouse_genomes_project 11 86943575 86947731 + Car4 protein_coding processed_transcript MGP_LPJ_T0031294.1 MGP_LPJ_G0018780.1 mouse_genomes_project 11 86943589 86950403 + MGP_LPJ_P0031294 Car4 protein_coding nonsense_mediated_decay MGP_LPJ_T0031295.1 MGP_LPJ_G0018780.1 mouse_genomes_project 11 86943868 86950068 + MGP_LPJ_P0031295 Car4 protein_coding nonsense_mediated_decay MGP_LPJ_T0031296.1 MGP_LPJ_G0018780.1 mouse_genomes_project 11 86946910 86951874 + MGP_LPJ_P0031296 Car4 protein_coding protein_coding MGP_LPJ_T0101762.1 MGP_LPJ_G0039800.1 mouse_genomes_project 11 50568483 50569438 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0034040.1 MGP_LPJ_G0019421.1 mouse_genomes_project 11 125407111 125415559 - MGP_LPJ_P0034040 Mafg protein_coding protein_coding MGP_LPJ_T0034041.1 MGP_LPJ_G0019421.1 mouse_genomes_project 11 125411007 125412798 - MGP_LPJ_P0034041 Mafg protein_coding protein_coding MGP_LPJ_T0034042.1 MGP_LPJ_G0019421.1 mouse_genomes_project 11 125411141 125412637 - MGP_LPJ_P0034042 Mafg protein_coding protein_coding MGP_LPJ_T0034043.1 MGP_LPJ_G0019421.1 mouse_genomes_project 11 125411232 125412149 - MGP_LPJ_P0034043 Mafg protein_coding protein_coding MGP_LPJ_T0034044.1 MGP_LPJ_G0019421.1 mouse_genomes_project 11 125413224 125415515 - Mafg protein_coding processed_transcript MGP_LPJ_T0003151.1 MGP_LPJ_G0002925.1 mouse_genomes_project 11 16604476 16605824 + Gm16141 antisense antisense MGP_LPJ_T0017226.1 MGP_LPJ_G0015134.1 mouse_genomes_project 11 122203631 122206213 + 2900041M22Rik processed_transcript processed_transcript MGP_LPJ_T0028848.1 MGP_LPJ_G0018177.1 mouse_genomes_project 11 51257100 51276823 + MGP_LPJ_P0028848 Phykpl protein_coding protein_coding MGP_LPJ_T0028849.1 MGP_LPJ_G0018177.1 mouse_genomes_project 11 51257100 51275588 + MGP_LPJ_P0028849 Phykpl protein_coding nonsense_mediated_decay MGP_LPJ_T0028850.1 MGP_LPJ_G0018177.1 mouse_genomes_project 11 51257132 51273662 + MGP_LPJ_P0028850 Phykpl protein_coding protein_coding MGP_LPJ_T0028851.1 MGP_LPJ_G0018177.1 mouse_genomes_project 11 51257146 51269344 + Phykpl protein_coding retained_intron MGP_LPJ_T0028852.1 MGP_LPJ_G0018177.1 mouse_genomes_project 11 51257150 51259661 + Phykpl protein_coding retained_intron MGP_LPJ_T0028853.1 MGP_LPJ_G0018177.1 mouse_genomes_project 11 51257154 51265640 + Phykpl protein_coding retained_intron MGP_LPJ_T0028854.1 MGP_LPJ_G0018177.1 mouse_genomes_project 11 51263780 51266215 + Phykpl protein_coding retained_intron MGP_LPJ_T0028855.1 MGP_LPJ_G0018177.1 mouse_genomes_project 11 51271600 51273401 + Phykpl protein_coding retained_intron MGP_LPJ_T0031106.1 MGP_LPJ_G0018729.1 mouse_genomes_project 11 83950427 84084663 - Ccl1 protein_coding processed_transcript MGP_LPJ_T0031107.1 MGP_LPJ_G0018729.1 mouse_genomes_project 11 83950427 83953555 - MGP_LPJ_P0031107 Ccl1 protein_coding protein_coding MGP_LPJ_T0031108.1 MGP_LPJ_G0018729.1 mouse_genomes_project 11 83950429 83953555 - MGP_LPJ_P0031108 Ccl1 protein_coding protein_coding MGP_LPJ_T0017142.1 MGP_LPJ_G0015090.1 mouse_genomes_project 11 63205715 63207832 + 2410006H16Rik processed_transcript processed_transcript MGP_LPJ_T0030758.1 MGP_LPJ_G0018647.1 mouse_genomes_project 11 78565076 78693383 - MGP_LPJ_P0030758 Efcab5 protein_coding unknown_likely_coding MGP_LPJ_T0030759.1 MGP_LPJ_G0018647.1 mouse_genomes_project 11 78565086 78668653 - MGP_LPJ_P0030759 Efcab5 protein_coding protein_coding MGP_LPJ_T0030760.1 MGP_LPJ_G0018647.1 mouse_genomes_project 11 78565115 78578243 - Efcab5 protein_coding retained_intron MGP_LPJ_T0030761.1 MGP_LPJ_G0018647.1 mouse_genomes_project 11 78565356 78632311 - MGP_LPJ_P0030761 Efcab5 protein_coding protein_coding MGP_LPJ_T0030762.1 MGP_LPJ_G0018647.1 mouse_genomes_project 11 78577900 78613502 - Efcab5 protein_coding retained_intron MGP_LPJ_T0030763.1 MGP_LPJ_G0018647.1 mouse_genomes_project 11 78631919 78648882 - Efcab5 protein_coding processed_transcript MGP_LPJ_T0028029.1 MGP_LPJ_G0017960.1 mouse_genomes_project 11 13795834 13825544 + MGP_LPJ_P0028029 Vstm2a protein_coding protein_coding MGP_LPJ_T0028030.1 MGP_LPJ_G0017960.1 mouse_genomes_project 11 13795913 13959718 + MGP_LPJ_P0028030 Vstm2a protein_coding protein_coding MGP_LPJ_T0028031.1 MGP_LPJ_G0017960.1 mouse_genomes_project 11 13796151 13823444 + MGP_LPJ_P0028031 Vstm2a protein_coding unknown_likely_coding MGP_LPJ_T0017232.1 MGP_LPJ_G0015139.1 mouse_genomes_project 11 124982716 124984500 - 2900052L18Rik processed_transcript processed_transcript MGP_LPJ_T0033298.1 MGP_LPJ_G0019278.1 mouse_genomes_project 11 119639048 119655246 - MGP_LPJ_P0033298 Grin2c protein_coding protein_coding MGP_LPJ_T0033299.1 MGP_LPJ_G0019278.1 mouse_genomes_project 11 119639048 119657060 - MGP_LPJ_P0033299 Grin2c protein_coding protein_coding MGP_LPJ_T0031728.1 MGP_LPJ_G0018885.1 mouse_genomes_project 11 98102880 98148799 + MGP_LPJ_P0031728 Fam117a protein_coding protein_coding MGP_LPJ_T0031729.1 MGP_LPJ_G0018885.1 mouse_genomes_project 11 98102882 98142010 + Fam117a protein_coding processed_transcript MGP_LPJ_T0031730.1 MGP_LPJ_G0018885.1 mouse_genomes_project 11 98105793 98142559 + Fam117a protein_coding processed_transcript MGP_LPJ_T0031731.1 MGP_LPJ_G0018885.1 mouse_genomes_project 11 98105795 98129876 + Fam117a protein_coding processed_transcript MGP_LPJ_T0031732.1 MGP_LPJ_G0018885.1 mouse_genomes_project 11 98105824 98142014 + Fam117a protein_coding processed_transcript MGP_LPJ_T0031733.1 MGP_LPJ_G0018885.1 mouse_genomes_project 11 98142393 98144512 + Fam117a protein_coding processed_transcript MGP_LPJ_T0029667.1 MGP_LPJ_G0018391.1 mouse_genomes_project 11 67864885 67879651 - MGP_LPJ_P0029667 Adprm protein_coding nonsense_mediated_decay MGP_LPJ_T0029668.1 MGP_LPJ_G0018391.1 mouse_genomes_project 11 67865021 67879627 - MGP_LPJ_P0029668 Adprm protein_coding protein_coding MGP_LPJ_T0029669.1 MGP_LPJ_G0018391.1 mouse_genomes_project 11 67865249 67867508 - Adprm protein_coding processed_transcript MGP_LPJ_T0029670.1 MGP_LPJ_G0018391.1 mouse_genomes_project 11 67868676 67879642 - Adprm protein_coding processed_transcript MGP_LPJ_T0029671.1 MGP_LPJ_G0018391.1 mouse_genomes_project 11 67868717 67879648 - Adprm protein_coding processed_transcript MGP_LPJ_T0029672.1 MGP_LPJ_G0018391.1 mouse_genomes_project 11 67868862 67879646 - Adprm protein_coding processed_transcript MGP_LPJ_T0028868.1 MGP_LPJ_G0018182.1 mouse_genomes_project 11 51325679 51332281 + MGP_LPJ_P0028868 protein_coding protein_coding MGP_LPJ_T0028869.1 MGP_LPJ_G0018182.1 mouse_genomes_project 11 51325681 51332280 + MGP_LPJ_P0028869 protein_coding protein_coding MGP_LPJ_T0012642.1 MGP_LPJ_G0010733.1 mouse_genomes_project 11 68933373 68934079 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009685.1 MGP_LPJ_G0007803.1 mouse_genomes_project 11 45319911 45319968 + Mir7239 miRNA miRNA MGP_LPJ_T0101793.1 MGP_LPJ_G0039831.1 mouse_genomes_project 11 103220715 103220955 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0032177.1 MGP_LPJ_G0019011.1 mouse_genomes_project 11 102763739 102764581 - MGP_LPJ_P0032177 protein_coding protein_coding MGP_LPJ_T0030715.1 MGP_LPJ_G0018637.1 mouse_genomes_project 11 77813389 77821404 + MGP_LPJ_P0030715 Timm22 protein_coding protein_coding MGP_LPJ_T0030716.1 MGP_LPJ_G0018637.1 mouse_genomes_project 11 77813580 77823367 + MGP_LPJ_P0030716 Timm22 protein_coding protein_coding MGP_LPJ_T0030717.1 MGP_LPJ_G0018637.1 mouse_genomes_project 11 77813628 77821157 + MGP_LPJ_P0030717 Timm22 protein_coding protein_coding MGP_LPJ_T0030718.1 MGP_LPJ_G0018637.1 mouse_genomes_project 11 77813642 77817003 + MGP_LPJ_P0030718 Timm22 protein_coding nonsense_mediated_decay MGP_LPJ_T0031829.1 MGP_LPJ_G0018916.1 mouse_genomes_project 11 99659938 99675251 + MGP_LPJ_P0031829 Cbx1 protein_coding protein_coding MGP_LPJ_T0031830.1 MGP_LPJ_G0018916.1 mouse_genomes_project 11 99659948 99680643 + MGP_LPJ_P0031830 Cbx1 protein_coding nonsense_mediated_decay MGP_LPJ_T0031831.1 MGP_LPJ_G0018916.1 mouse_genomes_project 11 99659970 99681134 + MGP_LPJ_P0031831 Cbx1 protein_coding protein_coding MGP_LPJ_T0031832.1 MGP_LPJ_G0018916.1 mouse_genomes_project 11 99659986 99672686 + Cbx1 protein_coding retained_intron MGP_LPJ_T0031833.1 MGP_LPJ_G0018916.1 mouse_genomes_project 11 99660060 99681034 + MGP_LPJ_P0031833 Cbx1 protein_coding protein_coding MGP_LPJ_T0031468.1 MGP_LPJ_G0018820.1 mouse_genomes_project 11 90032771 90034121 - MGP_LPJ_P0031468 protein_coding protein_coding MGP_LPJ_T0032324.1 MGP_LPJ_G0019073.1 mouse_genomes_project 11 104192910 104195248 + MGP_LPJ_P0032324 Stat5a protein_coding protein_coding MGP_LPJ_T0032325.1 MGP_LPJ_G0019073.1 mouse_genomes_project 11 104193845 104196721 + MGP_LPJ_P0032325 Stat5a protein_coding protein_coding MGP_LPJ_T0032326.1 MGP_LPJ_G0019073.1 mouse_genomes_project 11 104193847 104224376 + MGP_LPJ_P0032326 Stat5a protein_coding protein_coding MGP_LPJ_T0032327.1 MGP_LPJ_G0019073.1 mouse_genomes_project 11 104193984 104225548 + MGP_LPJ_P0032327 Stat5a protein_coding protein_coding MGP_LPJ_T0032328.1 MGP_LPJ_G0019073.1 mouse_genomes_project 11 104193985 104214178 + Stat5a protein_coding processed_transcript MGP_LPJ_T0032329.1 MGP_LPJ_G0019073.1 mouse_genomes_project 11 104219412 104220501 + Stat5a protein_coding processed_transcript MGP_LPJ_T0029428.1 MGP_LPJ_G0018342.1 mouse_genomes_project 11 61676630 61699900 - MGP_LPJ_P0029428 Usp22 protein_coding protein_coding MGP_LPJ_T0029429.1 MGP_LPJ_G0018342.1 mouse_genomes_project 11 61678863 61682237 - Usp22 protein_coding retained_intron MGP_LPJ_T0029430.1 MGP_LPJ_G0018342.1 mouse_genomes_project 11 61680554 61684229 - Usp22 protein_coding retained_intron MGP_LPJ_T0029431.1 MGP_LPJ_G0018342.1 mouse_genomes_project 11 61686239 61693120 - MGP_LPJ_P0029431 Usp22 protein_coding nonsense_mediated_decay MGP_LPJ_T0029432.1 MGP_LPJ_G0018342.1 mouse_genomes_project 11 61687616 61699874 - Usp22 protein_coding retained_intron MGP_LPJ_T0009737.1 MGP_LPJ_G0007855.1 mouse_genomes_project 11 81356983 81357095 + Mir365-2 miRNA miRNA MGP_LPJ_T0012557.1 MGP_LPJ_G0010648.1 mouse_genomes_project 11 34413297 34413976 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003171.1 MGP_LPJ_G0002944.1 mouse_genomes_project 11 45506002 45508732 + Gm12167 antisense antisense MGP_LPJ_T0032739.1 MGP_LPJ_G0019150.1 mouse_genomes_project 11 106434854 106447799 - MGP_LPJ_P0032739 Gfap protein_coding protein_coding MGP_LPJ_T0032740.1 MGP_LPJ_G0019150.1 mouse_genomes_project 11 106440313 106447868 - MGP_LPJ_P0032740 Gfap protein_coding protein_coding MGP_LPJ_T0032741.1 MGP_LPJ_G0019150.1 mouse_genomes_project 11 106445144 106451585 - Gfap protein_coding processed_transcript MGP_LPJ_T0031800.1 MGP_LPJ_G0018908.1 mouse_genomes_project 11 99141757 99150773 + MGP_LPJ_P0031800 Hoxb6 protein_coding protein_coding MGP_LPJ_T0031801.1 MGP_LPJ_G0018908.1 mouse_genomes_project 11 99148374 99150772 + MGP_LPJ_P0031801 Hoxb6 protein_coding protein_coding MGP_LPJ_T0028937.1 MGP_LPJ_G0018201.1 mouse_genomes_project 11 53262918 53265824 - MGP_LPJ_P0028937 Uqcrq protein_coding protein_coding MGP_LPJ_T0028938.1 MGP_LPJ_G0018201.1 mouse_genomes_project 11 53263949 53265828 - Uqcrq protein_coding processed_transcript MGP_LPJ_T0028939.1 MGP_LPJ_G0018201.1 mouse_genomes_project 11 53263949 53265824 - MGP_LPJ_P0028939 Uqcrq protein_coding protein_coding MGP_LPJ_T0028940.1 MGP_LPJ_G0018201.1 mouse_genomes_project 11 53263949 53265431 - MGP_LPJ_P0028940 Uqcrq protein_coding protein_coding MGP_LPJ_T0030284.1 MGP_LPJ_G0018523.1 mouse_genomes_project 11 72097403 72123961 - Nup88 protein_coding retained_intron MGP_LPJ_T0030285.1 MGP_LPJ_G0018523.1 mouse_genomes_project 11 72097417 72123975 - MGP_LPJ_P0030285 Nup88 protein_coding protein_coding MGP_LPJ_T0030286.1 MGP_LPJ_G0018523.1 mouse_genomes_project 11 72097422 72100706 - Nup88 protein_coding retained_intron MGP_LPJ_T0030287.1 MGP_LPJ_G0018523.1 mouse_genomes_project 11 72097427 72123964 - MGP_LPJ_P0030287 Nup88 protein_coding protein_coding MGP_LPJ_T0030288.1 MGP_LPJ_G0018523.1 mouse_genomes_project 11 72097447 72123956 - MGP_LPJ_P0030288 Nup88 protein_coding protein_coding MGP_LPJ_T0030289.1 MGP_LPJ_G0018523.1 mouse_genomes_project 11 72097521 72123882 - MGP_LPJ_P0030289 Nup88 protein_coding nonsense_mediated_decay MGP_LPJ_T0030290.1 MGP_LPJ_G0018523.1 mouse_genomes_project 11 72098222 72099444 - Nup88 protein_coding retained_intron MGP_LPJ_T0030291.1 MGP_LPJ_G0018523.1 mouse_genomes_project 11 72098281 72098832 - Nup88 protein_coding retained_intron MGP_LPJ_T0030292.1 MGP_LPJ_G0018523.1 mouse_genomes_project 11 72098323 72099081 - Nup88 protein_coding retained_intron MGP_LPJ_T0030293.1 MGP_LPJ_G0018523.1 mouse_genomes_project 11 72098756 72099378 - Nup88 protein_coding retained_intron MGP_LPJ_T0030294.1 MGP_LPJ_G0018523.1 mouse_genomes_project 11 72099026 72103158 - Nup88 protein_coding retained_intron MGP_LPJ_T0030295.1 MGP_LPJ_G0018523.1 mouse_genomes_project 11 72103907 72123963 - Nup88 protein_coding retained_intron MGP_LPJ_T0030296.1 MGP_LPJ_G0018523.1 mouse_genomes_project 11 72108859 72110861 - Nup88 protein_coding retained_intron MGP_LPJ_T0030297.1 MGP_LPJ_G0018523.1 mouse_genomes_project 11 72109557 72111312 - Nup88 protein_coding retained_intron MGP_LPJ_T0030298.1 MGP_LPJ_G0018523.1 mouse_genomes_project 11 72110598 72116161 - Nup88 protein_coding retained_intron MGP_LPJ_T0032215.1 MGP_LPJ_G0019044.1 mouse_genomes_project 11 103427704 103433015 - MGP_LPJ_P0032215 Krt19 protein_coding protein_coding MGP_LPJ_T0032216.1 MGP_LPJ_G0019044.1 mouse_genomes_project 11 103427801 103430594 - Krt19 protein_coding processed_transcript MGP_LPJ_T0032217.1 MGP_LPJ_G0019044.1 mouse_genomes_project 11 103429014 103436059 - Krt19 protein_coding processed_transcript MGP_LPJ_T0012744.1 MGP_LPJ_G0010835.1 mouse_genomes_project 11 108209271 108209561 - processed_pseudogene processed_pseudogene MGP_LPJ_T0028969.1 MGP_LPJ_G0018210.1 mouse_genomes_project 11 53443782 53463874 - Il4 protein_coding processed_transcript MGP_LPJ_T0028970.1 MGP_LPJ_G0018210.1 mouse_genomes_project 11 53459109 53465319 - MGP_LPJ_P0028970 Il4 protein_coding protein_coding MGP_LPJ_T0028971.1 MGP_LPJ_G0018210.1 mouse_genomes_project 11 53459109 53463988 - MGP_LPJ_P0028971 Il4 protein_coding protein_coding MGP_LPJ_T0028972.1 MGP_LPJ_G0018210.1 mouse_genomes_project 11 53459109 53465002 - MGP_LPJ_P0028972 Il4 protein_coding protein_coding MGP_LPJ_T0012698.1 MGP_LPJ_G0010789.1 mouse_genomes_project 11 88689250 88689849 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011317.1 MGP_LPJ_G0009435.1 mouse_genomes_project 11 58161698 58161969 + Gm26025 misc_RNA misc_RNA MGP_LPJ_T0032675.1 MGP_LPJ_G0019137.1 mouse_genomes_project 11 105934983 105948758 - MGP_LPJ_P0032675 Fam171a2 protein_coding protein_coding MGP_LPJ_T0032676.1 MGP_LPJ_G0019137.1 mouse_genomes_project 11 105936750 105937788 - Fam171a2 protein_coding processed_transcript MGP_LPJ_T0032677.1 MGP_LPJ_G0019137.1 mouse_genomes_project 11 105938243 105948670 - Fam171a2 protein_coding processed_transcript MGP_LPJ_T0012641.1 MGP_LPJ_G0010732.1 mouse_genomes_project 11 67352045 67353024 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100160.1 MGP_LPJ_G0038423.1 mouse_genomes_project 11 76213848 76213941 + Snord91a snoRNA snoRNA MGP_LPJ_T0009773.1 MGP_LPJ_G0007891.1 mouse_genomes_project 11 110710627 110710731 - Gm27322 miRNA miRNA MGP_LPJ_T0012593.1 MGP_LPJ_G0010684.1 mouse_genomes_project 11 52229511 52229698 - processed_pseudogene processed_pseudogene MGP_LPJ_T0033142.1 MGP_LPJ_G0019240.1 mouse_genomes_project 11 113655827 113709530 - MGP_LPJ_P0033142 Fam20a protein_coding nonsense_mediated_decay MGP_LPJ_T0033143.1 MGP_LPJ_G0019240.1 mouse_genomes_project 11 113659004 113709507 - MGP_LPJ_P0033143 Fam20a protein_coding protein_coding MGP_LPJ_T0033144.1 MGP_LPJ_G0019240.1 mouse_genomes_project 11 113659552 113662495 - Fam20a protein_coding retained_intron MGP_LPJ_T0033145.1 MGP_LPJ_G0019240.1 mouse_genomes_project 11 113660711 113669067 - Fam20a protein_coding retained_intron MGP_LPJ_T0029661.1 MGP_LPJ_G0018388.1 mouse_genomes_project 11 66982353 67311238 - MGP_LPJ_P0029661 Shisa6 protein_coding protein_coding MGP_LPJ_T0029662.1 MGP_LPJ_G0018388.1 mouse_genomes_project 11 66982353 67311238 - MGP_LPJ_P0029662 Shisa6 protein_coding protein_coding MGP_LPJ_T0029663.1 MGP_LPJ_G0018388.1 mouse_genomes_project 11 67157472 67286943 - Shisa6 protein_coding processed_transcript MGP_LPJ_T0012494.1 MGP_LPJ_G0010585.1 mouse_genomes_project 11 16094744 16096426 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017159.1 MGP_LPJ_G0015101.1 mouse_genomes_project 11 79822055 79823164 - Gm11193 processed_transcript processed_transcript MGP_LPJ_T0031834.1 MGP_LPJ_G0018917.1 mouse_genomes_project 11 99690993 99697593 - MGP_LPJ_P0031834 Nfe2l1 protein_coding protein_coding MGP_LPJ_T0031835.1 MGP_LPJ_G0018917.1 mouse_genomes_project 11 99690993 99703456 - MGP_LPJ_P0031835 Nfe2l1 protein_coding protein_coding MGP_LPJ_T0031836.1 MGP_LPJ_G0018917.1 mouse_genomes_project 11 99691178 99701299 - MGP_LPJ_P0031836 Nfe2l1 protein_coding protein_coding MGP_LPJ_T0031837.1 MGP_LPJ_G0018917.1 mouse_genomes_project 11 99693672 99697707 - MGP_LPJ_P0031837 Nfe2l1 protein_coding protein_coding MGP_LPJ_T0031838.1 MGP_LPJ_G0018917.1 mouse_genomes_project 11 99694049 99697588 - MGP_LPJ_P0031838 Nfe2l1 protein_coding protein_coding MGP_LPJ_T0031839.1 MGP_LPJ_G0018917.1 mouse_genomes_project 11 99694925 99696305 - Nfe2l1 protein_coding processed_transcript MGP_LPJ_T0031840.1 MGP_LPJ_G0018917.1 mouse_genomes_project 11 99695802 99698132 - Nfe2l1 protein_coding processed_transcript MGP_LPJ_T0031841.1 MGP_LPJ_G0018917.1 mouse_genomes_project 11 99701312 99703081 - Nfe2l1 protein_coding processed_transcript MGP_LPJ_T0006316.1 MGP_LPJ_G0005272.1 mouse_genomes_project 11 85738377 85774956 - Gm12576 lincRNA lincRNA MGP_LPJ_T0011331.1 MGP_LPJ_G0009449.1 mouse_genomes_project 11 108819304 108819400 + Gm24290 misc_RNA misc_RNA MGP_LPJ_T0033128.1 MGP_LPJ_G0019237.1 mouse_genomes_project 11 113445434 113462046 + Arsg protein_coding processed_transcript MGP_LPJ_T0033129.1 MGP_LPJ_G0019237.1 mouse_genomes_project 11 113445434 113551074 + MGP_LPJ_P0033129 Arsg protein_coding protein_coding MGP_LPJ_T0033130.1 MGP_LPJ_G0019237.1 mouse_genomes_project 11 113457069 113461944 + Arsg protein_coding processed_transcript MGP_LPJ_T0033131.1 MGP_LPJ_G0019237.1 mouse_genomes_project 11 113457652 113551079 + MGP_LPJ_P0033131 Arsg protein_coding protein_coding MGP_LPJ_T0033132.1 MGP_LPJ_G0019237.1 mouse_genomes_project 11 113520004 113551079 + MGP_LPJ_P0033132 Arsg protein_coding protein_coding MGP_LPJ_T0032179.1 MGP_LPJ_G0019013.1 mouse_genomes_project 11 102812786 102813751 - MGP_LPJ_P0032179 protein_coding protein_coding MGP_LPJ_T0003349.1 MGP_LPJ_G0003090.1 mouse_genomes_project 11 113316403 113328558 - Gm11696 antisense antisense MGP_LPJ_T0003350.1 MGP_LPJ_G0003090.1 mouse_genomes_project 11 113317339 113317992 - Gm11696 antisense antisense MGP_LPJ_T0003351.1 MGP_LPJ_G0003090.1 mouse_genomes_project 11 113318344 113329002 - Gm11696 antisense antisense MGP_LPJ_T0003352.1 MGP_LPJ_G0003090.1 mouse_genomes_project 11 113318735 113328591 - Gm11696 antisense antisense MGP_LPJ_T0017230.1 MGP_LPJ_G0015138.1 mouse_genomes_project 11 124937714 124941067 - 2810410L24Rik processed_transcript processed_transcript MGP_LPJ_T0017231.1 MGP_LPJ_G0015138.1 mouse_genomes_project 11 124940021 124942168 - 2810410L24Rik processed_transcript processed_transcript MGP_LPJ_T0034134.1 MGP_LPJ_G0019437.1 mouse_genomes_project 11 125764249 125797513 - MGP_LPJ_P0034134 Csnk1d protein_coding protein_coding MGP_LPJ_T0034135.1 MGP_LPJ_G0019437.1 mouse_genomes_project 11 125764249 125797751 - MGP_LPJ_P0034135 Csnk1d protein_coding protein_coding MGP_LPJ_T0034136.1 MGP_LPJ_G0019437.1 mouse_genomes_project 11 125766151 125768190 - Csnk1d protein_coding processed_transcript MGP_LPJ_T0034137.1 MGP_LPJ_G0019437.1 mouse_genomes_project 11 125766276 125777293 - Csnk1d protein_coding processed_transcript MGP_LPJ_T0034138.1 MGP_LPJ_G0019437.1 mouse_genomes_project 11 125773278 125773728 - Csnk1d protein_coding processed_transcript MGP_LPJ_T0034139.1 MGP_LPJ_G0019437.1 mouse_genomes_project 11 125778140 125797292 - MGP_LPJ_P0034139 Csnk1d protein_coding protein_coding MGP_LPJ_T0034140.1 MGP_LPJ_G0019437.1 mouse_genomes_project 11 125778158 125797408 - MGP_LPJ_P0034140 Csnk1d protein_coding nonsense_mediated_decay MGP_LPJ_T0034141.1 MGP_LPJ_G0019437.1 mouse_genomes_project 11 125789399 125797472 - Csnk1d protein_coding retained_intron MGP_LPJ_T0003293.1 MGP_LPJ_G0003043.1 mouse_genomes_project 11 99140305 99156114 - Hoxb5os antisense antisense MGP_LPJ_T0003294.1 MGP_LPJ_G0003043.1 mouse_genomes_project 11 99142744 99154285 - Hoxb5os antisense antisense MGP_LPJ_T0028709.1 MGP_LPJ_G0018138.1 mouse_genomes_project 11 48899603 48905707 + MGP_LPJ_P0028709 protein_coding protein_coding MGP_LPJ_T0033771.1 MGP_LPJ_G0019368.1 mouse_genomes_project 11 123031297 123036700 - MGP_LPJ_P0033771 Lgals3bp protein_coding protein_coding MGP_LPJ_T0033772.1 MGP_LPJ_G0019368.1 mouse_genomes_project 11 123031297 123040637 - MGP_LPJ_P0033772 Lgals3bp protein_coding protein_coding MGP_LPJ_T0033773.1 MGP_LPJ_G0019368.1 mouse_genomes_project 11 123035153 123040397 - MGP_LPJ_P0033773 Lgals3bp protein_coding protein_coding MGP_LPJ_T0033774.1 MGP_LPJ_G0019368.1 mouse_genomes_project 11 123035355 123040417 - Lgals3bp protein_coding processed_transcript MGP_LPJ_T0033775.1 MGP_LPJ_G0019368.1 mouse_genomes_project 11 123038304 123039582 - MGP_LPJ_P0033775 Lgals3bp protein_coding protein_coding MGP_LPJ_T0009702.1 MGP_LPJ_G0007820.1 mouse_genomes_project 11 61222574 61222638 + Mir5100 miRNA miRNA MGP_LPJ_T0032578.1 MGP_LPJ_G0019126.1 mouse_genomes_project 11 105664065 105668547 + MGP_LPJ_P0032578 G6pc3 protein_coding protein_coding MGP_LPJ_T0032579.1 MGP_LPJ_G0019126.1 mouse_genomes_project 11 105664114 105668547 + MGP_LPJ_P0032579 G6pc3 protein_coding protein_coding MGP_LPJ_T0032580.1 MGP_LPJ_G0019126.1 mouse_genomes_project 11 105664200 105666607 + G6pc3 protein_coding processed_transcript MGP_LPJ_T0032581.1 MGP_LPJ_G0019126.1 mouse_genomes_project 11 105664266 105667666 + G6pc3 protein_coding processed_transcript MGP_LPJ_T0032582.1 MGP_LPJ_G0019126.1 mouse_genomes_project 11 105666274 105668118 + G6pc3 protein_coding processed_transcript MGP_LPJ_T0032583.1 MGP_LPJ_G0019126.1 mouse_genomes_project 11 105666484 105668064 + G6pc3 protein_coding processed_transcript MGP_LPJ_T0032584.1 MGP_LPJ_G0019126.1 mouse_genomes_project 11 105666490 105668217 + G6pc3 protein_coding processed_transcript MGP_LPJ_T0029639.1 MGP_LPJ_G0018384.1 mouse_genomes_project 11 65905856 66001182 - MGP_LPJ_P0029639 Myocd protein_coding protein_coding MGP_LPJ_T0029640.1 MGP_LPJ_G0018384.1 mouse_genomes_project 11 65905865 66001230 - MGP_LPJ_P0029640 Myocd protein_coding protein_coding MGP_LPJ_T0029641.1 MGP_LPJ_G0018384.1 mouse_genomes_project 11 65906060 65911469 - Myocd protein_coding processed_transcript MGP_LPJ_T0029642.1 MGP_LPJ_G0018384.1 mouse_genomes_project 11 65907733 65949030 - MGP_LPJ_P0029642 Myocd protein_coding protein_coding MGP_LPJ_T0029643.1 MGP_LPJ_G0018384.1 mouse_genomes_project 11 65926868 65936017 - MGP_LPJ_P0029643 Myocd protein_coding protein_coding MGP_LPJ_T0029644.1 MGP_LPJ_G0018384.1 mouse_genomes_project 11 65954202 66001095 - Myocd protein_coding processed_transcript MGP_LPJ_T0031091.1 MGP_LPJ_G0018719.1 mouse_genomes_project 11 82517932 82529776 + MGP_LPJ_P0031091 Tmem98 protein_coding protein_coding MGP_LPJ_T0101767.1 MGP_LPJ_G0039805.1 mouse_genomes_project 11 59359314 59359725 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0012691.1 MGP_LPJ_G0010782.1 mouse_genomes_project 11 84772773 84773606 + processed_pseudogene processed_pseudogene MGP_LPJ_T0029174.1 MGP_LPJ_G0018266.1 mouse_genomes_project 11 58710596 58711662 - MGP_LPJ_P0029174 Olfr30 protein_coding protein_coding MGP_LPJ_T0033113.1 MGP_LPJ_G0019233.1 mouse_genomes_project 11 113328178 113367387 + MGP_LPJ_P0033113 Gna13 protein_coding protein_coding MGP_LPJ_T0033114.1 MGP_LPJ_G0019233.1 mouse_genomes_project 11 113328178 113346744 + MGP_LPJ_P0033114 Gna13 protein_coding protein_coding MGP_LPJ_T0017140.1 MGP_LPJ_G0015089.1 mouse_genomes_project 11 60174893 60181749 - 1700007J10Rik processed_transcript processed_transcript MGP_LPJ_T0017141.1 MGP_LPJ_G0015089.1 mouse_genomes_project 11 60174893 60189131 - 1700007J10Rik processed_transcript processed_transcript MGP_LPJ_T0009756.1 MGP_LPJ_G0007874.1 mouse_genomes_project 11 101012291 101012371 + Gm27597 miRNA miRNA MGP_LPJ_T0101249.1 MGP_LPJ_G0039495.1 mouse_genomes_project 11 3862044 3872444 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101250.1 MGP_LPJ_G0039495.1 mouse_genomes_project 11 3862270 3862736 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0101251.1 MGP_LPJ_G0039495.1 mouse_genomes_project 11 3863040 3870939 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101252.1 MGP_LPJ_G0039495.1 mouse_genomes_project 11 3863313 3872421 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0030444.1 MGP_LPJ_G0018558.1 mouse_genomes_project 11 74354084 74368532 + MGP_LPJ_P0030444 P2rx5 protein_coding protein_coding MGP_LPJ_T0030445.1 MGP_LPJ_G0018558.1 mouse_genomes_project 11 74354248 74366345 + MGP_LPJ_P0030445 P2rx5 protein_coding protein_coding MGP_LPJ_T0030446.1 MGP_LPJ_G0018558.1 mouse_genomes_project 11 74354248 74366345 + MGP_LPJ_P0030446 P2rx5 protein_coding protein_coding MGP_LPJ_T0012567.1 MGP_LPJ_G0010658.1 mouse_genomes_project 11 40482100 40483013 + processed_pseudogene processed_pseudogene MGP_LPJ_T0030539.1 MGP_LPJ_G0018600.1 mouse_genomes_project 11 75978369 76030486 - Pafah1b1 protein_coding retained_intron MGP_LPJ_T0030540.1 MGP_LPJ_G0018600.1 mouse_genomes_project 11 75978369 76030830 - MGP_LPJ_P0030540 Pafah1b1 protein_coding protein_coding MGP_LPJ_T0030541.1 MGP_LPJ_G0018600.1 mouse_genomes_project 11 75978370 76030469 - Pafah1b1 protein_coding retained_intron MGP_LPJ_T0030542.1 MGP_LPJ_G0018600.1 mouse_genomes_project 11 75978370 76030009 - MGP_LPJ_P0030542 Pafah1b1 protein_coding protein_coding MGP_LPJ_T0030543.1 MGP_LPJ_G0018600.1 mouse_genomes_project 11 75995111 76029322 - MGP_LPJ_P0030543 Pafah1b1 protein_coding protein_coding MGP_LPJ_T0003142.1 MGP_LPJ_G0002920.1 mouse_genomes_project 11 9274701 9291735 + 1700042O10Rik antisense antisense MGP_LPJ_T0098897.1 MGP_LPJ_G0037160.1 mouse_genomes_project 11 35404146 35404252 + Gm22127 snRNA snRNA MGP_LPJ_T0031778.1 MGP_LPJ_G0018899.1 mouse_genomes_project 11 98862027 98876170 + MGP_LPJ_P0031778 Snf8 protein_coding protein_coding MGP_LPJ_T0031779.1 MGP_LPJ_G0018899.1 mouse_genomes_project 11 98862098 98872401 + Snf8 protein_coding processed_transcript MGP_LPJ_T0031780.1 MGP_LPJ_G0018899.1 mouse_genomes_project 11 98862107 98876170 + MGP_LPJ_P0031780 Snf8 protein_coding protein_coding MGP_LPJ_T0031781.1 MGP_LPJ_G0018899.1 mouse_genomes_project 11 98873429 98876170 + Snf8 protein_coding processed_transcript MGP_LPJ_T0031782.1 MGP_LPJ_G0018899.1 mouse_genomes_project 11 98873563 98876059 + Snf8 protein_coding processed_transcript MGP_LPJ_T0033431.1 MGP_LPJ_G0019303.1 mouse_genomes_project 11 120263191 120274184 + MGP_LPJ_P0033431 Tsen54 protein_coding protein_coding MGP_LPJ_T0033432.1 MGP_LPJ_G0019303.1 mouse_genomes_project 11 120263191 120274184 + MGP_LPJ_P0033432 Tsen54 protein_coding protein_coding MGP_LPJ_T0033433.1 MGP_LPJ_G0019303.1 mouse_genomes_project 11 120263213 120264013 + Tsen54 protein_coding retained_intron MGP_LPJ_T0033434.1 MGP_LPJ_G0019303.1 mouse_genomes_project 11 120263238 120270428 + Tsen54 protein_coding retained_intron MGP_LPJ_T0033435.1 MGP_LPJ_G0019303.1 mouse_genomes_project 11 120263272 120270407 + Tsen54 protein_coding retained_intron MGP_LPJ_T0033436.1 MGP_LPJ_G0019303.1 mouse_genomes_project 11 120264165 120271599 + MGP_LPJ_P0033436 Tsen54 protein_coding protein_coding MGP_LPJ_T0033437.1 MGP_LPJ_G0019303.1 mouse_genomes_project 11 120270609 120274179 + MGP_LPJ_P0033437 Tsen54 protein_coding protein_coding MGP_LPJ_T0033438.1 MGP_LPJ_G0019303.1 mouse_genomes_project 11 120270745 120273362 + MGP_LPJ_P0033438 Tsen54 protein_coding protein_coding MGP_LPJ_T0012632.1 MGP_LPJ_G0010723.1 mouse_genomes_project 11 62532272 62532657 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017177.1 MGP_LPJ_G0015109.1 mouse_genomes_project 11 98667594 98669773 + 4833417C18Rik processed_transcript processed_transcript MGP_LPJ_T0033420.1 MGP_LPJ_G0019301.1 mouse_genomes_project 11 120215491 120247897 + MGP_LPJ_P0033420 Tmem94 protein_coding protein_coding MGP_LPJ_T0033421.1 MGP_LPJ_G0019301.1 mouse_genomes_project 11 120215500 120234608 + MGP_LPJ_P0033421 Tmem94 protein_coding protein_coding MGP_LPJ_T0033422.1 MGP_LPJ_G0019301.1 mouse_genomes_project 11 120215501 120234932 + MGP_LPJ_P0033422 Tmem94 protein_coding protein_coding MGP_LPJ_T0033423.1 MGP_LPJ_G0019301.1 mouse_genomes_project 11 120215512 120234851 + MGP_LPJ_P0033423 Tmem94 protein_coding protein_coding MGP_LPJ_T0033424.1 MGP_LPJ_G0019301.1 mouse_genomes_project 11 120216766 120225375 + Tmem94 protein_coding processed_transcript MGP_LPJ_T0033425.1 MGP_LPJ_G0019301.1 mouse_genomes_project 11 120223763 120247564 + MGP_LPJ_P0033425 Tmem94 protein_coding protein_coding MGP_LPJ_T0033426.1 MGP_LPJ_G0019301.1 mouse_genomes_project 11 120237612 120240513 + MGP_LPJ_P0033426 Tmem94 protein_coding protein_coding MGP_LPJ_T0012740.1 MGP_LPJ_G0010831.1 mouse_genomes_project 11 106265603 106266366 - processed_pseudogene processed_pseudogene MGP_LPJ_T0028585.1 MGP_LPJ_G0018097.1 mouse_genomes_project 11 45197172 45297037 + MGP_LPJ_P0028585 Adam19 protein_coding protein_coding MGP_LPJ_T0028586.1 MGP_LPJ_G0018097.1 mouse_genomes_project 11 45197238 45206764 + Adam19 protein_coding processed_transcript MGP_LPJ_T0028587.1 MGP_LPJ_G0018097.1 mouse_genomes_project 11 45275036 45293562 + Adam19 protein_coding processed_transcript MGP_LPJ_T0028588.1 MGP_LPJ_G0018097.1 mouse_genomes_project 11 45282852 45287365 + Adam19 protein_coding retained_intron MGP_LPJ_T0006272.1 MGP_LPJ_G0005240.1 mouse_genomes_project 11 62508284 62510106 + Gm12273 lincRNA lincRNA MGP_LPJ_T0011812.1 MGP_LPJ_G0009928.1 mouse_genomes_project 11 75129992 75133937 + MGP_LPJ_P0011812 Olfr396-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_LPJ_T0011813.1 MGP_LPJ_G0009928.1 mouse_genomes_project 11 75133217 75133850 + MGP_LPJ_P0011813 Olfr396-ps1 polymorphic_pseudogene protein_coding MGP_LPJ_T0030201.1 MGP_LPJ_G0018508.1 mouse_genomes_project 11 71677699 71733213 + MGP_LPJ_P0030201 Mink1 protein_coding protein_coding MGP_LPJ_T0030202.1 MGP_LPJ_G0018508.1 mouse_genomes_project 11 71677708 71733015 + MGP_LPJ_P0030202 Mink1 protein_coding protein_coding MGP_LPJ_T0030203.1 MGP_LPJ_G0018508.1 mouse_genomes_project 11 71677716 71733209 + MGP_LPJ_P0030203 Mink1 protein_coding protein_coding MGP_LPJ_T0030204.1 MGP_LPJ_G0018508.1 mouse_genomes_project 11 71677835 71733214 + MGP_LPJ_P0030204 Mink1 protein_coding protein_coding MGP_LPJ_T0030205.1 MGP_LPJ_G0018508.1 mouse_genomes_project 11 71677888 71732983 + MGP_LPJ_P0030205 Mink1 protein_coding protein_coding MGP_LPJ_T0030206.1 MGP_LPJ_G0018508.1 mouse_genomes_project 11 71716013 71722724 + Mink1 protein_coding processed_transcript MGP_LPJ_T0030207.1 MGP_LPJ_G0018508.1 mouse_genomes_project 11 71719253 71733214 + MGP_LPJ_P0030207 Mink1 protein_coding protein_coding MGP_LPJ_T0030208.1 MGP_LPJ_G0018508.1 mouse_genomes_project 11 71721892 71725108 + MGP_LPJ_P0030208 Mink1 protein_coding protein_coding MGP_LPJ_T0030209.1 MGP_LPJ_G0018508.1 mouse_genomes_project 11 71721915 71724763 + MGP_LPJ_P0030209 Mink1 protein_coding nonsense_mediated_decay MGP_LPJ_T0030210.1 MGP_LPJ_G0018508.1 mouse_genomes_project 11 71724384 71725457 + Mink1 protein_coding retained_intron MGP_LPJ_T0030211.1 MGP_LPJ_G0018508.1 mouse_genomes_project 11 71725495 71726512 + Mink1 protein_coding retained_intron MGP_LPJ_T0030212.1 MGP_LPJ_G0018508.1 mouse_genomes_project 11 71727421 71730010 + Mink1 protein_coding retained_intron MGP_LPJ_T0030213.1 MGP_LPJ_G0018508.1 mouse_genomes_project 11 71729351 71730250 + Mink1 protein_coding retained_intron MGP_LPJ_T0006366.1 MGP_LPJ_G0005307.1 mouse_genomes_project 11 113600762 113628312 + Gm11685 lincRNA lincRNA MGP_LPJ_T0028213.1 MGP_LPJ_G0018005.1 mouse_genomes_project 11 21966134 22060757 + MGP_LPJ_P0028213 Bcl11a protein_coding unknown_likely_coding MGP_LPJ_T0028214.1 MGP_LPJ_G0018005.1 mouse_genomes_project 11 21968103 22070239 + MGP_LPJ_P0028214 Bcl11a protein_coding protein_coding MGP_LPJ_T0028215.1 MGP_LPJ_G0018005.1 mouse_genomes_project 11 21968164 22071168 + MGP_LPJ_P0028215 Bcl11a protein_coding protein_coding MGP_LPJ_T0028216.1 MGP_LPJ_G0018005.1 mouse_genomes_project 11 21968194 21982472 + Bcl11a protein_coding retained_intron MGP_LPJ_T0028217.1 MGP_LPJ_G0018005.1 mouse_genomes_project 11 21970717 22070603 + MGP_LPJ_P0028217 Bcl11a protein_coding protein_coding MGP_LPJ_T0028218.1 MGP_LPJ_G0018005.1 mouse_genomes_project 11 22037928 22058882 + Bcl11a protein_coding processed_transcript MGP_LPJ_T0031102.1 MGP_LPJ_G0018726.1 mouse_genomes_project 11 83826167 83831092 + MGP_LPJ_P0031102 Ccl11 protein_coding protein_coding MGP_LPJ_T0012537.1 MGP_LPJ_G0010628.1 mouse_genomes_project 11 27818096 27819343 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098120.1 MGP_LPJ_G0036401.1 mouse_genomes_project 11 73405032 73405148 + n-R5s70 rRNA rRNA MGP_LPJ_T0031460.1 MGP_LPJ_G0018817.1 mouse_genomes_project 11 89991811 90002430 + MGP_LPJ_P0031460 Mks1 protein_coding protein_coding MGP_LPJ_T0031461.1 MGP_LPJ_G0018817.1 mouse_genomes_project 11 89991823 89997935 + Mks1 protein_coding retained_intron MGP_LPJ_T0031462.1 MGP_LPJ_G0018817.1 mouse_genomes_project 11 89992271 89997935 + Mks1 protein_coding retained_intron MGP_LPJ_T0031463.1 MGP_LPJ_G0018817.1 mouse_genomes_project 11 89995173 89995908 + Mks1 protein_coding retained_intron MGP_LPJ_T0031464.1 MGP_LPJ_G0018817.1 mouse_genomes_project 11 90000560 90001888 + Mks1 protein_coding retained_intron MGP_LPJ_T0006265.1 MGP_LPJ_G0005234.1 mouse_genomes_project 11 60357664 60367275 + Gm12714 lincRNA lincRNA MGP_LPJ_T0006249.1 MGP_LPJ_G0005220.1 mouse_genomes_project 11 44267584 44322285 + Gm12160 lincRNA lincRNA MGP_LPJ_T0029206.1 MGP_LPJ_G0018286.1 mouse_genomes_project 11 59194310 59195743 + MGP_LPJ_P0029206 protein_coding protein_coding MGP_LPJ_T0006337.1 MGP_LPJ_G0005287.1 mouse_genomes_project 11 93178023 93279774 + 4930405D11Rik lincRNA lincRNA MGP_LPJ_T0006338.1 MGP_LPJ_G0005287.1 mouse_genomes_project 11 93259108 93279718 + 4930405D11Rik lincRNA lincRNA MGP_LPJ_T0006339.1 MGP_LPJ_G0005287.1 mouse_genomes_project 11 93259133 93279624 + 4930405D11Rik lincRNA lincRNA MGP_LPJ_T0003169.1 MGP_LPJ_G0002942.1 mouse_genomes_project 11 45293487 45296810 - Gm16033 antisense antisense MGP_LPJ_T0031694.1 MGP_LPJ_G0018876.1 mouse_genomes_project 11 97712557 97713421 + MGP_LPJ_P0031694 Hils1 protein_coding protein_coding MGP_LPJ_T0027884.1 MGP_LPJ_G0017926.1 mouse_genomes_project 11 3372014 3373631 + MGP_LPJ_P0027884 A730071L15Rik protein_coding protein_coding MGP_LPJ_T0003134.1 MGP_LPJ_G0002914.1 mouse_genomes_project 11 2632026 2640348 + Gm11963 antisense antisense MGP_LPJ_T0031105.1 MGP_LPJ_G0018728.1 mouse_genomes_project 11 83893096 83894711 + MGP_LPJ_P0031105 Ccl8 protein_coding protein_coding MGP_LPJ_T0032697.1 MGP_LPJ_G0019141.1 mouse_genomes_project 11 106127071 106130753 + MGP_LPJ_P0032697 Fzd2 protein_coding protein_coding MGP_LPJ_T0033272.1 MGP_LPJ_G0019273.1 mouse_genomes_project 11 119465526 119528717 + Rab37 protein_coding retained_intron MGP_LPJ_T0033273.1 MGP_LPJ_G0019273.1 mouse_genomes_project 11 119465526 119542004 + MGP_LPJ_P0033273 Rab37 protein_coding protein_coding MGP_LPJ_T0033282.1 MGP_LPJ_G0019273.1 mouse_genomes_project 11 119533929 119542004 + MGP_LPJ_P0033282 Rab37 protein_coding protein_coding MGP_LPJ_T0033283.1 MGP_LPJ_G0019273.1 mouse_genomes_project 11 119533975 119537319 + Rab37 protein_coding retained_intron MGP_LPJ_T0012560.1 MGP_LPJ_G0010651.1 mouse_genomes_project 11 38585561 38586204 - processed_pseudogene processed_pseudogene MGP_LPJ_T0028790.1 MGP_LPJ_G0018159.1 mouse_genomes_project 11 50155211 50368005 + MGP_LPJ_P0028790 Adamts2 protein_coding protein_coding MGP_LPJ_T0028791.1 MGP_LPJ_G0018159.1 mouse_genomes_project 11 50334097 50334934 + Adamts2 protein_coding processed_transcript MGP_LPJ_T0028792.1 MGP_LPJ_G0018159.1 mouse_genomes_project 11 50339585 50340614 + Adamts2 protein_coding processed_transcript MGP_LPJ_T0028793.1 MGP_LPJ_G0018159.1 mouse_genomes_project 11 50354932 50357862 + Adamts2 protein_coding processed_transcript MGP_LPJ_T0098115.1 MGP_LPJ_G0036396.1 mouse_genomes_project 11 25088200 25088282 + n-R5s68 rRNA rRNA MGP_LPJ_T0003299.1 MGP_LPJ_G0003047.1 mouse_genomes_project 11 99807583 99810945 - Gm11525 antisense antisense MGP_LPJ_T0027736.1 MGP_LPJ_G0017894.1 mouse_genomes_project 11 1679911 1683127 + MGP_LPJ_P0027736 Gm11032 protein_coding protein_coding MGP_LPJ_T0003255.1 MGP_LPJ_G0003015.1 mouse_genomes_project 11 81234029 81250098 - Rab11fip4os1 antisense antisense MGP_LPJ_T0028611.1 MGP_LPJ_G0018104.1 mouse_genomes_project 11 45622511 45650713 + MGP_LPJ_P0028611 Havcr2 protein_coding protein_coding MGP_LPJ_T0028612.1 MGP_LPJ_G0018104.1 mouse_genomes_project 11 45622545 45650704 + MGP_LPJ_P0028612 Havcr2 protein_coding protein_coding MGP_LPJ_T0006404.1 MGP_LPJ_G0005337.1 mouse_genomes_project 11 125905315 125905882 - Gm11791 lincRNA lincRNA MGP_LPJ_T0017126.1 MGP_LPJ_G0015083.1 mouse_genomes_project 11 53403517 53406135 - A430108G06Rik processed_transcript processed_transcript MGP_LPJ_T0017127.1 MGP_LPJ_G0015083.1 mouse_genomes_project 11 53403593 53406143 - A430108G06Rik processed_transcript processed_transcript MGP_LPJ_T0100156.1 MGP_LPJ_G0038419.1 mouse_genomes_project 11 70692859 70693003 - Gm25835 snoRNA snoRNA MGP_LPJ_T0027833.1 MGP_LPJ_G0017914.1 mouse_genomes_project 11 2857342 2861049 - MGP_LPJ_P0027833 Mrps24 protein_coding protein_coding MGP_LPJ_T0027834.1 MGP_LPJ_G0017914.1 mouse_genomes_project 11 2857688 2861029 - Mrps24 protein_coding retained_intron MGP_LPJ_T0027835.1 MGP_LPJ_G0017914.1 mouse_genomes_project 11 2857885 2869040 - Mrps24 protein_coding processed_transcript MGP_LPJ_T0027836.1 MGP_LPJ_G0017914.1 mouse_genomes_project 11 2857917 2861052 - Mrps24 protein_coding retained_intron MGP_LPJ_T0027837.1 MGP_LPJ_G0017914.1 mouse_genomes_project 11 2858022 2861004 - Mrps24 protein_coding retained_intron MGP_LPJ_T0028373.1 MGP_LPJ_G0018039.1 mouse_genomes_project 11 30658740 30703964 - MGP_LPJ_P0028373 Nprl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0028378.1 MGP_LPJ_G0018039.1 mouse_genomes_project 11 30664375 30691047 - Nprl3 protein_coding processed_transcript MGP_LPJ_T0028379.1 MGP_LPJ_G0018039.1 mouse_genomes_project 11 30664375 30703964 - MGP_LPJ_P0028379 Nprl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0028380.1 MGP_LPJ_G0018039.1 mouse_genomes_project 11 30665075 30703982 - MGP_LPJ_P0028380 Nprl3 protein_coding protein_coding MGP_LPJ_T0028381.1 MGP_LPJ_G0018039.1 mouse_genomes_project 11 30665166 30703933 - MGP_LPJ_P0028381 Nprl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0028382.1 MGP_LPJ_G0018039.1 mouse_genomes_project 11 30666047 30667543 - Nprl3 protein_coding retained_intron MGP_LPJ_T0028383.1 MGP_LPJ_G0018039.1 mouse_genomes_project 11 30666055 30703904 - MGP_LPJ_P0028383 Nprl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0028384.1 MGP_LPJ_G0018039.1 mouse_genomes_project 11 30666063 30703822 - MGP_LPJ_P0028384 Nprl3 protein_coding protein_coding MGP_LPJ_T0028385.1 MGP_LPJ_G0018039.1 mouse_genomes_project 11 30669988 30673204 - Nprl3 protein_coding retained_intron MGP_LPJ_T0028386.1 MGP_LPJ_G0018039.1 mouse_genomes_project 11 30670034 30671177 - Nprl3 protein_coding retained_intron MGP_LPJ_T0028387.1 MGP_LPJ_G0018039.1 mouse_genomes_project 11 30673062 30688693 - Nprl3 protein_coding retained_intron MGP_LPJ_T0028388.1 MGP_LPJ_G0018039.1 mouse_genomes_project 11 30673125 30703933 - MGP_LPJ_P0028388 Nprl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0028389.1 MGP_LPJ_G0018039.1 mouse_genomes_project 11 30676266 30684812 - Nprl3 protein_coding processed_transcript MGP_LPJ_T0028390.1 MGP_LPJ_G0018039.1 mouse_genomes_project 11 30682414 30684912 - Nprl3 protein_coding processed_transcript MGP_LPJ_T0028391.1 MGP_LPJ_G0018039.1 mouse_genomes_project 11 30684796 30703890 - MGP_LPJ_P0028391 Nprl3 protein_coding protein_coding MGP_LPJ_T0028392.1 MGP_LPJ_G0018039.1 mouse_genomes_project 11 30697228 30703826 - Nprl3 protein_coding processed_transcript MGP_LPJ_T0028083.1 MGP_LPJ_G0017976.1 mouse_genomes_project 11 17993136 18025540 - MGP_LPJ_P0028083 Slc1a4 protein_coding protein_coding MGP_LPJ_T0006384.1 MGP_LPJ_G0005320.1 mouse_genomes_project 11 120042591 120053816 + Gm26613 lincRNA lincRNA MGP_LPJ_T0027880.1 MGP_LPJ_G0017925.1 mouse_genomes_project 11 3281247 3372401 - MGP_LPJ_P0027880 Nudcd3 protein_coding protein_coding MGP_LPJ_T0027881.1 MGP_LPJ_G0017925.1 mouse_genomes_project 11 3281542 3294989 - Nudcd3 protein_coding processed_transcript MGP_LPJ_T0027882.1 MGP_LPJ_G0017925.1 mouse_genomes_project 11 3282014 3364163 - MGP_LPJ_P0027882 Nudcd3 protein_coding protein_coding MGP_LPJ_T0027883.1 MGP_LPJ_G0017925.1 mouse_genomes_project 11 3298514 3364163 - Nudcd3 protein_coding retained_intron MGP_LPJ_T0100138.1 MGP_LPJ_G0038401.1 mouse_genomes_project 11 33450672 33450799 - Gm22022 snoRNA snoRNA MGP_LPJ_T0031911.1 MGP_LPJ_G0018933.1 mouse_genomes_project 11 100262939 100284376 - MGP_LPJ_P0031911 protein_coding protein_coding MGP_LPJ_T0031912.1 MGP_LPJ_G0018933.1 mouse_genomes_project 11 100281790 100284437 - protein_coding retained_intron MGP_LPJ_T0032834.1 MGP_LPJ_G0019173.1 mouse_genomes_project 11 107740009 107786059 + MGP_LPJ_P0032834 Crhr1 protein_coding protein_coding MGP_LPJ_T0030510.1 MGP_LPJ_G0018588.1 mouse_genomes_project 11 75330832 75331780 + MGP_LPJ_P0030510 Olfr401 protein_coding protein_coding MGP_LPJ_T0032960.1 MGP_LPJ_G0019203.1 mouse_genomes_project 11 109994214 109998835 - MGP_LPJ_P0032960 Smarcd2 protein_coding protein_coding MGP_LPJ_T0032961.1 MGP_LPJ_G0019203.1 mouse_genomes_project 11 109994214 110006768 - MGP_LPJ_P0032961 Smarcd2 protein_coding protein_coding MGP_LPJ_T0032962.1 MGP_LPJ_G0019203.1 mouse_genomes_project 11 109994749 109996698 - Smarcd2 protein_coding retained_intron MGP_LPJ_T0032963.1 MGP_LPJ_G0019203.1 mouse_genomes_project 11 109994834 109995972 - Smarcd2 protein_coding retained_intron MGP_LPJ_T0032964.1 MGP_LPJ_G0019203.1 mouse_genomes_project 11 109995054 109996782 - MGP_LPJ_P0032964 Smarcd2 protein_coding protein_coding MGP_LPJ_T0032965.1 MGP_LPJ_G0019203.1 mouse_genomes_project 11 109995768 109997107 - Smarcd2 protein_coding retained_intron MGP_LPJ_T0032966.1 MGP_LPJ_G0019203.1 mouse_genomes_project 11 109996347 110006761 - Smarcd2 protein_coding processed_transcript MGP_LPJ_T0032967.1 MGP_LPJ_G0019203.1 mouse_genomes_project 11 109996774 109998519 - Smarcd2 protein_coding processed_transcript MGP_LPJ_T0032968.1 MGP_LPJ_G0019203.1 mouse_genomes_project 11 109997926 109998564 - Smarcd2 protein_coding retained_intron MGP_LPJ_T0003200.1 MGP_LPJ_G0002970.1 mouse_genomes_project 11 59400289 59402821 + antisense antisense MGP_LPJ_T0003201.1 MGP_LPJ_G0002970.1 mouse_genomes_project 11 59400289 59402821 + antisense antisense MGP_LPJ_T0012743.1 MGP_LPJ_G0010834.1 mouse_genomes_project 11 108125905 108126317 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003136.1 MGP_LPJ_G0002916.1 mouse_genomes_project 11 3669957 3687386 + Gm11973 antisense antisense MGP_LPJ_T0003137.1 MGP_LPJ_G0002916.1 mouse_genomes_project 11 3669997 3690796 + Gm11973 antisense antisense MGP_LPJ_T0003138.1 MGP_LPJ_G0002916.1 mouse_genomes_project 11 3670009 3690796 + Gm11973 antisense antisense MGP_LPJ_T0029059.1 MGP_LPJ_G0018229.1 mouse_genomes_project 11 54766009 54803130 - MGP_LPJ_P0029059 Lyrm7 protein_coding nonsense_mediated_decay MGP_LPJ_T0029060.1 MGP_LPJ_G0018229.1 mouse_genomes_project 11 54780446 54802822 - MGP_LPJ_P0029060 Lyrm7 protein_coding protein_coding MGP_LPJ_T0029061.1 MGP_LPJ_G0018229.1 mouse_genomes_project 11 54780447 54802802 - MGP_LPJ_P0029061 Lyrm7 protein_coding nonsense_mediated_decay MGP_LPJ_T0029062.1 MGP_LPJ_G0018229.1 mouse_genomes_project 11 54781726 54792108 - Lyrm7 protein_coding retained_intron MGP_LPJ_T0029063.1 MGP_LPJ_G0018229.1 mouse_genomes_project 11 54781766 54802823 - Lyrm7 protein_coding processed_transcript MGP_LPJ_T0029064.1 MGP_LPJ_G0018229.1 mouse_genomes_project 11 54791795 54802799 - Lyrm7 protein_coding retained_intron MGP_LPJ_T0028952.1 MGP_LPJ_G0018206.1 mouse_genomes_project 11 53313498 53317200 - MGP_LPJ_P0028952 Sowaha protein_coding protein_coding MGP_LPJ_T0032464.1 MGP_LPJ_G0019103.1 mouse_genomes_project 11 104848714 104851948 + MGP_LPJ_P0032464 Rpl27-ps3 protein_coding unknown_likely_coding MGP_LPJ_T0032465.1 MGP_LPJ_G0019103.1 mouse_genomes_project 11 104848758 104852483 + MGP_LPJ_P0032465 Rpl27-ps3 protein_coding protein_coding MGP_LPJ_T0032466.1 MGP_LPJ_G0019103.1 mouse_genomes_project 11 104848898 104850395 + Rpl27-ps3 protein_coding processed_transcript MGP_LPJ_T0032467.1 MGP_LPJ_G0019103.1 mouse_genomes_project 11 104848906 104852483 + MGP_LPJ_P0032467 Rpl27-ps3 protein_coding protein_coding MGP_LPJ_T0032468.1 MGP_LPJ_G0019103.1 mouse_genomes_project 11 104850072 104852483 + MGP_LPJ_P0032468 Rpl27-ps3 protein_coding protein_coding MGP_LPJ_T0032469.1 MGP_LPJ_G0019103.1 mouse_genomes_project 11 104851334 104852483 + Rpl27-ps3 protein_coding processed_transcript MGP_LPJ_T0006321.1 MGP_LPJ_G0005275.1 mouse_genomes_project 11 86736500 86753539 - Gm11431 lincRNA lincRNA MGP_LPJ_T0003324.1 MGP_LPJ_G0003067.1 mouse_genomes_project 11 105491795 105496629 - E130111B04Rik antisense antisense MGP_LPJ_T0029250.1 MGP_LPJ_G0018302.1 mouse_genomes_project 11 59628633 59647512 - MGP_LPJ_P0029250 Arf1 protein_coding protein_coding MGP_LPJ_T0029251.1 MGP_LPJ_G0018302.1 mouse_genomes_project 11 59628635 59647620 - MGP_LPJ_P0029251 Arf1 protein_coding protein_coding MGP_LPJ_T0028219.1 MGP_LPJ_G0018006.1 mouse_genomes_project 11 23541674 23586576 - 5730522E02Rik protein_coding processed_transcript MGP_LPJ_T0028220.1 MGP_LPJ_G0018006.1 mouse_genomes_project 11 23541726 23556872 - 5730522E02Rik protein_coding processed_transcript MGP_LPJ_T0028221.1 MGP_LPJ_G0018006.1 mouse_genomes_project 11 23554453 24183921 - 5730522E02Rik protein_coding processed_transcript MGP_LPJ_T0028222.1 MGP_LPJ_G0018006.1 mouse_genomes_project 11 23555860 24183924 - MGP_LPJ_P0028222 5730522E02Rik protein_coding protein_coding MGP_LPJ_T0028223.1 MGP_LPJ_G0018006.1 mouse_genomes_project 11 23573162 23590470 - 5730522E02Rik protein_coding processed_transcript MGP_LPJ_T0028224.1 MGP_LPJ_G0018006.1 mouse_genomes_project 11 23586343 23722704 - MGP_LPJ_P0028224 5730522E02Rik protein_coding protein_coding MGP_LPJ_T0028225.1 MGP_LPJ_G0018006.1 mouse_genomes_project 11 23796612 24048841 - 5730522E02Rik protein_coding processed_transcript MGP_LPJ_T0028226.1 MGP_LPJ_G0018006.1 mouse_genomes_project 11 24072104 24184115 - 5730522E02Rik protein_coding processed_transcript MGP_LPJ_T0032745.1 MGP_LPJ_G0019153.1 mouse_genomes_project 11 106551786 106575718 - MGP_LPJ_P0032745 Dcakd protein_coding protein_coding MGP_LPJ_T0032746.1 MGP_LPJ_G0019153.1 mouse_genomes_project 11 106551788 106556281 - Dcakd protein_coding retained_intron MGP_LPJ_T0032747.1 MGP_LPJ_G0019153.1 mouse_genomes_project 11 106558376 106588726 - MGP_LPJ_P0032747 Dcakd protein_coding protein_coding MGP_LPJ_T0032748.1 MGP_LPJ_G0019153.1 mouse_genomes_project 11 106587409 106588685 - Dcakd protein_coding retained_intron MGP_LPJ_T0032749.1 MGP_LPJ_G0019153.1 mouse_genomes_project 11 106587683 106588755 - Dcakd protein_coding processed_transcript MGP_LPJ_T0009663.1 MGP_LPJ_G0007781.1 mouse_genomes_project 11 1973933 1973991 + Mir6918 miRNA miRNA MGP_LPJ_T0027818.1 MGP_LPJ_G0017909.1 mouse_genomes_project 11 2303146 2378592 - MGP_LPJ_P0027818 protein_coding protein_coding MGP_LPJ_T0027819.1 MGP_LPJ_G0017909.1 mouse_genomes_project 11 2316076 2351116 - MGP_LPJ_P0027819 protein_coding protein_coding MGP_LPJ_T0032101.1 MGP_LPJ_G0018978.1 mouse_genomes_project 11 101876324 101899849 + MGP_LPJ_P0032101 Casc3 protein_coding protein_coding MGP_LPJ_T0032102.1 MGP_LPJ_G0018978.1 mouse_genomes_project 11 101876470 101899841 + MGP_LPJ_P0032102 Casc3 protein_coding protein_coding MGP_LPJ_T0032103.1 MGP_LPJ_G0018978.1 mouse_genomes_project 11 101876812 101877591 + Casc3 protein_coding processed_transcript MGP_LPJ_T0032104.1 MGP_LPJ_G0018978.1 mouse_genomes_project 11 101876823 101888980 + Casc3 protein_coding processed_transcript MGP_LPJ_T0032039.1 MGP_LPJ_G0018965.1 mouse_genomes_project 11 101468943 101475879 + MGP_LPJ_P0032039 Grb7 protein_coding protein_coding MGP_LPJ_T0032040.1 MGP_LPJ_G0018965.1 mouse_genomes_project 11 101469383 101479809 + MGP_LPJ_P0032040 Grb7 protein_coding protein_coding MGP_LPJ_T0032041.1 MGP_LPJ_G0018965.1 mouse_genomes_project 11 101469593 101479809 + Grb7 protein_coding retained_intron MGP_LPJ_T0032042.1 MGP_LPJ_G0018965.1 mouse_genomes_project 11 101469613 101479809 + Grb7 protein_coding retained_intron MGP_LPJ_T0032043.1 MGP_LPJ_G0018965.1 mouse_genomes_project 11 101476302 101478261 + Grb7 protein_coding retained_intron MGP_LPJ_T0032044.1 MGP_LPJ_G0018965.1 mouse_genomes_project 11 101478222 101479561 + Grb7 protein_coding retained_intron MGP_LPJ_T0030243.1 MGP_LPJ_G0018515.1 mouse_genomes_project 11 71781026 71788053 + MGP_LPJ_P0030243 Eno3 protein_coding protein_coding MGP_LPJ_T0030244.1 MGP_LPJ_G0018515.1 mouse_genomes_project 11 71781026 71784629 + MGP_LPJ_P0030244 Eno3 protein_coding protein_coding MGP_LPJ_T0030245.1 MGP_LPJ_G0018515.1 mouse_genomes_project 11 71781028 71788053 + MGP_LPJ_P0030245 Eno3 protein_coding protein_coding MGP_LPJ_T0030246.1 MGP_LPJ_G0018515.1 mouse_genomes_project 11 71781109 71782242 + MGP_LPJ_P0030246 Eno3 protein_coding protein_coding MGP_LPJ_T0030247.1 MGP_LPJ_G0018515.1 mouse_genomes_project 11 71781511 71782271 + MGP_LPJ_P0030247 Eno3 protein_coding protein_coding MGP_LPJ_T0030248.1 MGP_LPJ_G0018515.1 mouse_genomes_project 11 71781619 71788050 + MGP_LPJ_P0030248 Eno3 protein_coding protein_coding MGP_LPJ_T0030249.1 MGP_LPJ_G0018515.1 mouse_genomes_project 11 71782162 71784668 + Eno3 protein_coding retained_intron MGP_LPJ_T0030250.1 MGP_LPJ_G0018515.1 mouse_genomes_project 11 71784596 71787804 + MGP_LPJ_P0030250 Eno3 protein_coding protein_coding MGP_LPJ_T0012688.1 MGP_LPJ_G0010779.1 mouse_genomes_project 11 84514773 84515067 + processed_pseudogene processed_pseudogene MGP_LPJ_T0029722.1 MGP_LPJ_G0018405.1 mouse_genomes_project 11 68862097 69120106 + MGP_LPJ_P0029722 Stx8 protein_coding protein_coding MGP_LPJ_T0029723.1 MGP_LPJ_G0018405.1 mouse_genomes_project 11 68862373 68883507 + MGP_LPJ_P0029723 Stx8 protein_coding protein_coding MGP_LPJ_T0029724.1 MGP_LPJ_G0018405.1 mouse_genomes_project 11 68862384 68870495 + MGP_LPJ_P0029724 Stx8 protein_coding protein_coding MGP_LPJ_T0029725.1 MGP_LPJ_G0018405.1 mouse_genomes_project 11 68862394 69117148 + Stx8 protein_coding processed_transcript MGP_LPJ_T0029726.1 MGP_LPJ_G0018405.1 mouse_genomes_project 11 68862396 68870368 + Stx8 protein_coding processed_transcript MGP_LPJ_T0029727.1 MGP_LPJ_G0018405.1 mouse_genomes_project 11 68862410 68869545 + Stx8 protein_coding processed_transcript MGP_LPJ_T0006260.1 MGP_LPJ_G0005229.1 mouse_genomes_project 11 51830213 51833463 - 9430098F02Rik lincRNA lincRNA MGP_LPJ_T0003300.1 MGP_LPJ_G0003048.1 mouse_genomes_project 11 100078747 100081204 + antisense antisense MGP_LPJ_T0006354.1 MGP_LPJ_G0005297.1 mouse_genomes_project 11 103392007 103398344 - Gm12347 lincRNA lincRNA MGP_LPJ_T0033936.1 MGP_LPJ_G0019398.1 mouse_genomes_project 11 125105122 125107562 - MGP_LPJ_P0033936 protein_coding protein_coding MGP_LPJ_T0033937.1 MGP_LPJ_G0019398.1 mouse_genomes_project 11 125106178 125107568 - protein_coding retained_intron MGP_LPJ_T0033159.1 MGP_LPJ_G0019244.1 mouse_genomes_project 11 114113725 114182771 - MGP_LPJ_P0033159 Abca9 protein_coding protein_coding MGP_LPJ_T0033160.1 MGP_LPJ_G0019244.1 mouse_genomes_project 11 114169693 114182630 - Abca9 protein_coding processed_transcript MGP_LPJ_T0028200.1 MGP_LPJ_G0018001.1 mouse_genomes_project 11 21526121 21595098 + MGP_LPJ_P0028200 Pus10 protein_coding protein_coding MGP_LPJ_T0028201.1 MGP_LPJ_G0018001.1 mouse_genomes_project 11 21526144 21593747 + MGP_LPJ_P0028201 Pus10 protein_coding protein_coding MGP_LPJ_T0028202.1 MGP_LPJ_G0018001.1 mouse_genomes_project 11 21526454 21595098 + MGP_LPJ_P0028202 Pus10 protein_coding protein_coding MGP_LPJ_T0028203.1 MGP_LPJ_G0018001.1 mouse_genomes_project 11 21526635 21534583 + Pus10 protein_coding retained_intron MGP_LPJ_T0028204.1 MGP_LPJ_G0018001.1 mouse_genomes_project 11 21526958 21534469 + MGP_LPJ_P0028204 Pus10 protein_coding protein_coding MGP_LPJ_T0028205.1 MGP_LPJ_G0018001.1 mouse_genomes_project 11 21579818 21591293 + Pus10 protein_coding retained_intron MGP_LPJ_T0028206.1 MGP_LPJ_G0018001.1 mouse_genomes_project 11 21580880 21593620 + Pus10 protein_coding retained_intron MGP_LPJ_T0034117.1 MGP_LPJ_G0019434.1 mouse_genomes_project 11 125602480 125621182 - MGP_LPJ_P0034117 Fasn protein_coding protein_coding MGP_LPJ_T0034118.1 MGP_LPJ_G0019434.1 mouse_genomes_project 11 125603739 125620730 - MGP_LPJ_P0034118 Fasn protein_coding protein_coding MGP_LPJ_T0034119.1 MGP_LPJ_G0019434.1 mouse_genomes_project 11 125604181 125605240 - Fasn protein_coding retained_intron MGP_LPJ_T0034120.1 MGP_LPJ_G0019434.1 mouse_genomes_project 11 125605198 125606336 - Fasn protein_coding retained_intron MGP_LPJ_T0034121.1 MGP_LPJ_G0019434.1 mouse_genomes_project 11 125611129 125612090 - Fasn protein_coding retained_intron MGP_LPJ_T0034122.1 MGP_LPJ_G0019434.1 mouse_genomes_project 11 125619406 125620415 - MGP_LPJ_P0034122 Fasn protein_coding protein_coding MGP_LPJ_T0032167.1 MGP_LPJ_G0019001.1 mouse_genomes_project 11 102690632 102691364 - MGP_LPJ_P0032167 Krtap3-2 protein_coding protein_coding MGP_LPJ_T0028646.1 MGP_LPJ_G0018115.1 mouse_genomes_project 11 48140801 48150551 - Irgm1 protein_coding processed_transcript MGP_LPJ_T0028647.1 MGP_LPJ_G0018115.1 mouse_genomes_project 11 48144078 48150242 - MGP_LPJ_P0028647 Irgm1 protein_coding protein_coding MGP_LPJ_T0028648.1 MGP_LPJ_G0018115.1 mouse_genomes_project 11 48144951 48150288 - MGP_LPJ_P0028648 Irgm1 protein_coding protein_coding MGP_LPJ_T0031714.1 MGP_LPJ_G0018882.1 mouse_genomes_project 11 97898750 97904567 - MGP_LPJ_P0031714 Dlx4 protein_coding protein_coding MGP_LPJ_T0031715.1 MGP_LPJ_G0018882.1 mouse_genomes_project 11 97901930 97904105 - Dlx4 protein_coding processed_transcript MGP_LPJ_T0000880.1 MGP_LPJ_G0000809.1 mouse_genomes_project 11 43705659 43713013 - TEC TEC MGP_LPJ_T0098482.1 MGP_LPJ_G0036761.1 mouse_genomes_project 11 112280774 112281836 + Gm11656 sense_intronic sense_intronic MGP_LPJ_T0098483.1 MGP_LPJ_G0036761.1 mouse_genomes_project 11 112280790 112284008 + Gm11656 sense_intronic sense_intronic MGP_LPJ_T0003377.1 MGP_LPJ_G0003113.1 mouse_genomes_project 11 125260012 125263002 - Gm11788 antisense antisense MGP_LPJ_T0012680.1 MGP_LPJ_G0010771.1 mouse_genomes_project 11 80802685 80803133 + processed_pseudogene processed_pseudogene MGP_LPJ_T0031259.1 MGP_LPJ_G0018774.1 mouse_genomes_project 11 86789119 86795559 - MGP_LPJ_P0031259 Mrm1 protein_coding protein_coding MGP_LPJ_T0031260.1 MGP_LPJ_G0018774.1 mouse_genomes_project 11 86790786 86791434 - Mrm1 protein_coding retained_intron MGP_LPJ_T0031261.1 MGP_LPJ_G0018774.1 mouse_genomes_project 11 86791046 86794778 - Mrm1 protein_coding processed_transcript MGP_LPJ_T0012568.1 MGP_LPJ_G0010659.1 mouse_genomes_project 11 40685818 40686150 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011320.1 MGP_LPJ_G0009438.1 mouse_genomes_project 11 73459262 73459525 + Gm23224 misc_RNA misc_RNA MGP_LPJ_T0030506.1 MGP_LPJ_G0018587.1 mouse_genomes_project 11 75277638 75295487 + MGP_LPJ_P0030506 protein_coding protein_coding MGP_LPJ_T0030507.1 MGP_LPJ_G0018587.1 mouse_genomes_project 11 75277638 75293041 + MGP_LPJ_P0030507 protein_coding protein_coding MGP_LPJ_T0030508.1 MGP_LPJ_G0018587.1 mouse_genomes_project 11 75277848 75292262 + protein_coding processed_transcript MGP_LPJ_T0030509.1 MGP_LPJ_G0018587.1 mouse_genomes_project 11 75277868 75291990 + MGP_LPJ_P0030509 protein_coding protein_coding MGP_LPJ_T0032262.1 MGP_LPJ_G0019058.1 mouse_genomes_project 11 103774807 103784933 - MGP_LPJ_P0032262 Klhl11 protein_coding protein_coding MGP_LPJ_T0017228.1 MGP_LPJ_G0015136.1 mouse_genomes_project 11 124277340 124299148 + Gm11762 processed_transcript processed_transcript MGP_LPJ_T0101789.1 MGP_LPJ_G0039827.1 mouse_genomes_project 11 102863761 102863884 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0009753.1 MGP_LPJ_G0007871.1 mouse_genomes_project 11 100634393 100634464 + Mir6927 miRNA miRNA MGP_LPJ_T0012509.1 MGP_LPJ_G0010600.1 mouse_genomes_project 11 18969407 18970009 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101799.1 MGP_LPJ_G0039837.1 mouse_genomes_project 11 126705511 126709966 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0030526.1 MGP_LPJ_G0018596.1 mouse_genomes_project 11 75614724 75615719 + MGP_LPJ_P0030526 Olfr412 protein_coding protein_coding MGP_LPJ_T0098939.1 MGP_LPJ_G0037202.1 mouse_genomes_project 11 97661295 97661420 + Gm22456 snRNA snRNA MGP_LPJ_T0006191.1 MGP_LPJ_G0005169.1 mouse_genomes_project 11 1315127 1322958 + Gm11959 lincRNA lincRNA MGP_LPJ_T0098894.1 MGP_LPJ_G0037157.1 mouse_genomes_project 11 24317036 24317200 - Gm22868 snRNA snRNA MGP_LPJ_T0027858.1 MGP_LPJ_G0017921.1 mouse_genomes_project 11 3062858 3065003 - MGP_LPJ_P0027858 Myl7 protein_coding protein_coding MGP_LPJ_T0012590.1 MGP_LPJ_G0010681.1 mouse_genomes_project 11 50713043 50714282 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012585.1 MGP_LPJ_G0010676.1 mouse_genomes_project 11 49173373 49173860 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012759.1 MGP_LPJ_G0010850.1 mouse_genomes_project 11 113105369 113106297 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003241.1 MGP_LPJ_G0003003.1 mouse_genomes_project 11 70452688 70457817 + Dnah2os antisense antisense MGP_LPJ_T0032990.1 MGP_LPJ_G0019211.1 mouse_genomes_project 11 110241040 110368279 - MGP_LPJ_P0032990 Tex2 protein_coding protein_coding MGP_LPJ_T0032991.1 MGP_LPJ_G0019211.1 mouse_genomes_project 11 110286553 110327711 - MGP_LPJ_P0032991 Tex2 protein_coding protein_coding MGP_LPJ_T0032992.1 MGP_LPJ_G0019211.1 mouse_genomes_project 11 110315372 110368772 - MGP_LPJ_P0032992 Tex2 protein_coding protein_coding MGP_LPJ_T0032993.1 MGP_LPJ_G0019211.1 mouse_genomes_project 11 110315757 110329198 - MGP_LPJ_P0032993 Tex2 protein_coding protein_coding MGP_LPJ_T0012526.1 MGP_LPJ_G0010617.1 mouse_genomes_project 11 24847552 24848076 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017097.1 MGP_LPJ_G0015066.1 mouse_genomes_project 11 3927912 3931945 - Gm11981 processed_transcript processed_transcript MGP_LPJ_T0098904.1 MGP_LPJ_G0037167.1 mouse_genomes_project 11 54387679 54387787 + Gm24198 snRNA snRNA MGP_LPJ_T0033756.1 MGP_LPJ_G0019364.1 mouse_genomes_project 11 122763264 122882258 - MGP_LPJ_P0033756 Cyth1 protein_coding protein_coding MGP_LPJ_T0033757.1 MGP_LPJ_G0019364.1 mouse_genomes_project 11 122797362 122882348 - MGP_LPJ_P0033757 Cyth1 protein_coding protein_coding MGP_LPJ_T0033758.1 MGP_LPJ_G0019364.1 mouse_genomes_project 11 122797362 122845608 - MGP_LPJ_P0033758 Cyth1 protein_coding protein_coding MGP_LPJ_T0033759.1 MGP_LPJ_G0019364.1 mouse_genomes_project 11 122797371 122882316 - MGP_LPJ_P0033759 Cyth1 protein_coding protein_coding MGP_LPJ_T0033760.1 MGP_LPJ_G0019364.1 mouse_genomes_project 11 122810772 122882216 - MGP_LPJ_P0033760 Cyth1 protein_coding unknown_likely_coding MGP_LPJ_T0033761.1 MGP_LPJ_G0019364.1 mouse_genomes_project 11 122818168 122859843 - Cyth1 protein_coding processed_transcript MGP_LPJ_T0033762.1 MGP_LPJ_G0019364.1 mouse_genomes_project 11 122818623 122851891 - Cyth1 protein_coding processed_transcript MGP_LPJ_T0033763.1 MGP_LPJ_G0019364.1 mouse_genomes_project 11 122818642 122845608 - MGP_LPJ_P0033763 Cyth1 protein_coding protein_coding MGP_LPJ_T0006243.1 MGP_LPJ_G0005214.1 mouse_genomes_project 11 42097820 42110066 - Gm12145 lincRNA lincRNA MGP_LPJ_T0003186.1 MGP_LPJ_G0002958.1 mouse_genomes_project 11 54263102 54277742 - Gm12224 antisense antisense MGP_LPJ_T0003187.1 MGP_LPJ_G0002958.1 mouse_genomes_project 11 54267330 54277693 - Gm12224 antisense antisense MGP_LPJ_T0012656.1 MGP_LPJ_G0010747.1 mouse_genomes_project 11 72220975 72221779 - processed_pseudogene processed_pseudogene MGP_LPJ_T0032189.1 MGP_LPJ_G0019023.1 mouse_genomes_project 11 103032846 103034201 - MGP_LPJ_P0032189 2300003K06Rik protein_coding protein_coding MGP_LPJ_T0027670.1 MGP_LPJ_G0017879.1 mouse_genomes_project 11 970288 988472 + MGP_LPJ_P0027670 Pes1 protein_coding protein_coding MGP_LPJ_T0027671.1 MGP_LPJ_G0017879.1 mouse_genomes_project 11 970322 978172 + Pes1 protein_coding processed_transcript MGP_LPJ_T0027672.1 MGP_LPJ_G0017879.1 mouse_genomes_project 11 970362 984141 + Pes1 protein_coding processed_transcript MGP_LPJ_T0003353.1 MGP_LPJ_G0003091.1 mouse_genomes_project 11 113406464 113407435 - Gm15642 antisense antisense MGP_LPJ_T0098917.1 MGP_LPJ_G0037180.1 mouse_genomes_project 11 74960883 74960990 + Gm22381 snRNA snRNA MGP_LPJ_T0034205.1 MGP_LPJ_G0019456.1 mouse_genomes_project 11 126538606 126552125 + MGP_LPJ_P0034205 Metrnl protein_coding protein_coding MGP_LPJ_T0034206.1 MGP_LPJ_G0019456.1 mouse_genomes_project 11 126538827 126551898 + MGP_LPJ_P0034206 Metrnl protein_coding protein_coding MGP_LPJ_T0017187.1 MGP_LPJ_G0015114.1 mouse_genomes_project 11 99954805 99957547 - Gm11574 processed_transcript processed_transcript MGP_LPJ_T0098890.1 MGP_LPJ_G0037153.1 mouse_genomes_project 11 20691602 20691706 + Gm24917 snRNA snRNA MGP_LPJ_T0033652.1 MGP_LPJ_G0019343.1 mouse_genomes_project 11 121352773 121359252 + MGP_LPJ_P0033652 Mettl23 protein_coding protein_coding MGP_LPJ_T0033653.1 MGP_LPJ_G0019343.1 mouse_genomes_project 11 121353050 121359863 + Mettl23 protein_coding retained_intron MGP_LPJ_T0033654.1 MGP_LPJ_G0019343.1 mouse_genomes_project 11 121353056 121355635 + Mettl23 protein_coding retained_intron MGP_LPJ_T0033655.1 MGP_LPJ_G0019343.1 mouse_genomes_project 11 121353080 121355557 + Mettl23 protein_coding retained_intron MGP_LPJ_T0033656.1 MGP_LPJ_G0019343.1 mouse_genomes_project 11 121353168 121359141 + Mettl23 protein_coding retained_intron MGP_LPJ_T0033657.1 MGP_LPJ_G0019343.1 mouse_genomes_project 11 121353170 121358565 + MGP_LPJ_P0033657 Mettl23 protein_coding nonsense_mediated_decay MGP_LPJ_T0033658.1 MGP_LPJ_G0019343.1 mouse_genomes_project 11 121353170 121357868 + MGP_LPJ_P0033658 Mettl23 protein_coding nonsense_mediated_decay MGP_LPJ_T0033659.1 MGP_LPJ_G0019343.1 mouse_genomes_project 11 121358412 121363727 + MGP_LPJ_P0033659 Mettl23 protein_coding protein_coding MGP_LPJ_T0029193.1 MGP_LPJ_G0018276.1 mouse_genomes_project 11 58969791 58970952 + MGP_LPJ_P0029193 protein_coding protein_coding MGP_LPJ_T0012722.1 MGP_LPJ_G0010813.1 mouse_genomes_project 11 99943087 99943564 + processed_pseudogene processed_pseudogene MGP_LPJ_T0033641.1 MGP_LPJ_G0019340.1 mouse_genomes_project 11 121275237 121284607 - MGP_LPJ_P0033641 St6galnac1 protein_coding protein_coding MGP_LPJ_T0029999.1 MGP_LPJ_G0018471.1 mouse_genomes_project 11 70961906 70968429 - MGP_LPJ_P0029999 2810408A11Rik protein_coding protein_coding MGP_LPJ_T0030000.1 MGP_LPJ_G0018471.1 mouse_genomes_project 11 70961912 70968421 - MGP_LPJ_P0030000 2810408A11Rik protein_coding protein_coding MGP_LPJ_T0030001.1 MGP_LPJ_G0018471.1 mouse_genomes_project 11 70961917 70968510 - MGP_LPJ_P0030001 2810408A11Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0030002.1 MGP_LPJ_G0018471.1 mouse_genomes_project 11 70961917 70968473 - MGP_LPJ_P0030002 2810408A11Rik protein_coding protein_coding MGP_LPJ_T0030003.1 MGP_LPJ_G0018471.1 mouse_genomes_project 11 70961917 70968492 - MGP_LPJ_P0030003 2810408A11Rik protein_coding protein_coding MGP_LPJ_T0030004.1 MGP_LPJ_G0018471.1 mouse_genomes_project 11 70962020 70968522 - 2810408A11Rik protein_coding retained_intron MGP_LPJ_T0030005.1 MGP_LPJ_G0018471.1 mouse_genomes_project 11 70962020 70968492 - MGP_LPJ_P0030005 2810408A11Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0030006.1 MGP_LPJ_G0018471.1 mouse_genomes_project 11 70962759 70964199 - 2810408A11Rik protein_coding retained_intron MGP_LPJ_T0030007.1 MGP_LPJ_G0018471.1 mouse_genomes_project 11 70963762 70968474 - MGP_LPJ_P0030007 2810408A11Rik protein_coding protein_coding MGP_LPJ_T0012597.1 MGP_LPJ_G0010688.1 mouse_genomes_project 11 53498435 53499068 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012449.1 MGP_LPJ_G0010540.1 mouse_genomes_project 11 602077 602449 - processed_pseudogene processed_pseudogene MGP_LPJ_T0028584.1 MGP_LPJ_G0018096.1 mouse_genomes_project 11 45117556 45156045 + MGP_LPJ_P0028584 Sox30 protein_coding protein_coding MGP_LPJ_T0033697.1 MGP_LPJ_G0019350.1 mouse_genomes_project 11 122250385 122367124 + MGP_LPJ_P0033697 Tnrc6c protein_coding protein_coding MGP_LPJ_T0033698.1 MGP_LPJ_G0019350.1 mouse_genomes_project 11 122250669 122367115 + Tnrc6c protein_coding retained_intron MGP_LPJ_T0033699.1 MGP_LPJ_G0019350.1 mouse_genomes_project 11 122250909 122367126 + MGP_LPJ_P0033699 Tnrc6c protein_coding protein_coding MGP_LPJ_T0033700.1 MGP_LPJ_G0019350.1 mouse_genomes_project 11 122322392 122365963 + MGP_LPJ_P0033700 Tnrc6c protein_coding protein_coding MGP_LPJ_T0033701.1 MGP_LPJ_G0019350.1 mouse_genomes_project 11 122346186 122353001 + Tnrc6c protein_coding retained_intron MGP_LPJ_T0033702.1 MGP_LPJ_G0019350.1 mouse_genomes_project 11 122352930 122355008 + Tnrc6c protein_coding retained_intron MGP_LPJ_T0009731.1 MGP_LPJ_G0007849.1 mouse_genomes_project 11 79579326 79579392 + Mir144 miRNA miRNA MGP_LPJ_T0029132.1 MGP_LPJ_G0018252.1 mouse_genomes_project 11 58209021 58265394 + MGP_LPJ_P0029132 Larp1 protein_coding protein_coding MGP_LPJ_T0029133.1 MGP_LPJ_G0018252.1 mouse_genomes_project 11 58209021 58265397 + MGP_LPJ_P0029133 Larp1 protein_coding protein_coding MGP_LPJ_T0029134.1 MGP_LPJ_G0018252.1 mouse_genomes_project 11 58245040 58246440 + Larp1 protein_coding retained_intron MGP_LPJ_T0027820.1 MGP_LPJ_G0017910.1 mouse_genomes_project 11 2393382 2568224 - MGP_LPJ_P0027820 Znrf3 protein_coding protein_coding MGP_LPJ_T0027821.1 MGP_LPJ_G0017910.1 mouse_genomes_project 11 2397022 2501501 - MGP_LPJ_P0027821 Znrf3 protein_coding protein_coding MGP_LPJ_T0027822.1 MGP_LPJ_G0017910.1 mouse_genomes_project 11 2407210 2568224 - MGP_LPJ_P0027822 Znrf3 protein_coding protein_coding MGP_LPJ_T0098942.1 MGP_LPJ_G0037205.1 mouse_genomes_project 11 101444286 101444377 - Gm25048 snRNA snRNA MGP_LPJ_T0003178.1 MGP_LPJ_G0002950.1 mouse_genomes_project 11 51693704 51694763 + Gm12204 antisense antisense MGP_LPJ_T0006374.1 MGP_LPJ_G0005314.1 mouse_genomes_project 11 117257660 117427334 - 2610035D17Rik lincRNA lincRNA MGP_LPJ_T0006375.1 MGP_LPJ_G0005314.1 mouse_genomes_project 11 117257660 117427318 - 2610035D17Rik lincRNA lincRNA MGP_LPJ_T0006376.1 MGP_LPJ_G0005314.1 mouse_genomes_project 11 117257660 117395124 - 2610035D17Rik lincRNA lincRNA MGP_LPJ_T0006377.1 MGP_LPJ_G0005314.1 mouse_genomes_project 11 117258282 117395124 - 2610035D17Rik lincRNA lincRNA MGP_LPJ_T0029540.1 MGP_LPJ_G0018362.1 mouse_genomes_project 11 62895062 63046437 - MGP_LPJ_P0029540 Ncor1 protein_coding protein_coding MGP_LPJ_T0029541.1 MGP_LPJ_G0018362.1 mouse_genomes_project 11 62895062 63027336 - MGP_LPJ_P0029541 Ncor1 protein_coding protein_coding MGP_LPJ_T0029542.1 MGP_LPJ_G0018362.1 mouse_genomes_project 11 62895324 62961654 - MGP_LPJ_P0029542 Ncor1 protein_coding protein_coding MGP_LPJ_T0029543.1 MGP_LPJ_G0018362.1 mouse_genomes_project 11 62896235 62899645 - MGP_LPJ_P0029543 Ncor1 protein_coding protein_coding MGP_LPJ_T0029544.1 MGP_LPJ_G0018362.1 mouse_genomes_project 11 62896431 62938302 - MGP_LPJ_P0029544 Ncor1 protein_coding protein_coding MGP_LPJ_T0029545.1 MGP_LPJ_G0018362.1 mouse_genomes_project 11 62896431 62937525 - MGP_LPJ_P0029545 Ncor1 protein_coding protein_coding MGP_LPJ_T0029546.1 MGP_LPJ_G0018362.1 mouse_genomes_project 11 62896431 63027302 - MGP_LPJ_P0029546 Ncor1 protein_coding protein_coding MGP_LPJ_T0029547.1 MGP_LPJ_G0018362.1 mouse_genomes_project 11 62903705 62908431 - Ncor1 protein_coding retained_intron MGP_LPJ_T0029548.1 MGP_LPJ_G0018362.1 mouse_genomes_project 11 62903955 62908555 - Ncor1 protein_coding retained_intron MGP_LPJ_T0029549.1 MGP_LPJ_G0018362.1 mouse_genomes_project 11 62905578 62909329 - Ncor1 protein_coding retained_intron MGP_LPJ_T0029550.1 MGP_LPJ_G0018362.1 mouse_genomes_project 11 62918856 62923406 - Ncor1 protein_coding retained_intron MGP_LPJ_T0029551.1 MGP_LPJ_G0018362.1 mouse_genomes_project 11 62921420 62929890 - Ncor1 protein_coding processed_transcript MGP_LPJ_T0029552.1 MGP_LPJ_G0018362.1 mouse_genomes_project 11 62923289 62976992 - MGP_LPJ_P0029552 Ncor1 protein_coding protein_coding MGP_LPJ_T0029553.1 MGP_LPJ_G0018362.1 mouse_genomes_project 11 62932405 62949418 - Ncor1 protein_coding processed_transcript MGP_LPJ_T0029554.1 MGP_LPJ_G0018362.1 mouse_genomes_project 11 62947012 63027336 - Ncor1 protein_coding retained_intron MGP_LPJ_T0029555.1 MGP_LPJ_G0018362.1 mouse_genomes_project 11 62954047 62966342 - MGP_LPJ_P0029555 Ncor1 protein_coding protein_coding MGP_LPJ_T0029556.1 MGP_LPJ_G0018362.1 mouse_genomes_project 11 62954092 62968033 - MGP_LPJ_P0029556 Ncor1 protein_coding protein_coding MGP_LPJ_T0029557.1 MGP_LPJ_G0018362.1 mouse_genomes_project 11 62954112 62966491 - MGP_LPJ_P0029557 Ncor1 protein_coding protein_coding MGP_LPJ_T0029558.1 MGP_LPJ_G0018362.1 mouse_genomes_project 11 62954114 63046911 - MGP_LPJ_P0029558 Ncor1 protein_coding protein_coding MGP_LPJ_T0029559.1 MGP_LPJ_G0018362.1 mouse_genomes_project 11 62957322 62966400 - Ncor1 protein_coding retained_intron MGP_LPJ_T0029560.1 MGP_LPJ_G0018362.1 mouse_genomes_project 11 62967946 63027336 - MGP_LPJ_P0029560 Ncor1 protein_coding protein_coding MGP_LPJ_T0029561.1 MGP_LPJ_G0018362.1 mouse_genomes_project 11 62976381 62979563 - Ncor1 protein_coding retained_intron MGP_LPJ_T0029562.1 MGP_LPJ_G0018362.1 mouse_genomes_project 11 62985898 63046428 - MGP_LPJ_P0029562 Ncor1 protein_coding protein_coding MGP_LPJ_T0029563.1 MGP_LPJ_G0018362.1 mouse_genomes_project 11 63007071 63047646 - MGP_LPJ_P0029563 Ncor1 protein_coding protein_coding MGP_LPJ_T0006322.1 MGP_LPJ_G0005276.1 mouse_genomes_project 11 89141932 89142634 - Gm11479 lincRNA lincRNA MGP_LPJ_T0012589.1 MGP_LPJ_G0010680.1 mouse_genomes_project 11 50553416 50556761 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000872.1 MGP_LPJ_G0000801.1 mouse_genomes_project 11 7007034 7007397 - TEC TEC MGP_LPJ_T0100167.1 MGP_LPJ_G0038430.1 mouse_genomes_project 11 79700425 79700494 - Snord42b snoRNA snoRNA MGP_LPJ_T0030274.1 MGP_LPJ_G0018520.1 mouse_genomes_project 11 71899838 71909057 + MGP_LPJ_P0030274 Zfp3 protein_coding protein_coding MGP_LPJ_T0098955.1 MGP_LPJ_G0037218.1 mouse_genomes_project 11 113471744 113471855 - Gm22378 snRNA snRNA MGP_LPJ_T0012756.1 MGP_LPJ_G0010847.1 mouse_genomes_project 11 112325132 112325616 + processed_pseudogene processed_pseudogene MGP_LPJ_T0034194.1 MGP_LPJ_G0019453.1 mouse_genomes_project 11 126274231 126447530 + MGP_LPJ_P0034194 Tbcd protein_coding protein_coding MGP_LPJ_T0034195.1 MGP_LPJ_G0019453.1 mouse_genomes_project 11 126317886 126326513 + MGP_LPJ_P0034195 Tbcd protein_coding protein_coding MGP_LPJ_T0034196.1 MGP_LPJ_G0019453.1 mouse_genomes_project 11 126329497 126408221 + MGP_LPJ_P0034196 Tbcd protein_coding nonsense_mediated_decay MGP_LPJ_T0034198.1 MGP_LPJ_G0019453.1 mouse_genomes_project 11 126374073 126422454 + Tbcd protein_coding processed_transcript MGP_LPJ_T0034199.1 MGP_LPJ_G0019453.1 mouse_genomes_project 11 126380016 126422431 + Tbcd protein_coding retained_intron MGP_LPJ_T0034200.1 MGP_LPJ_G0019453.1 mouse_genomes_project 11 126430363 126447529 + Tbcd protein_coding retained_intron MGP_LPJ_T0034201.1 MGP_LPJ_G0019453.1 mouse_genomes_project 11 126433666 126447529 + Tbcd protein_coding processed_transcript MGP_LPJ_T0034202.1 MGP_LPJ_G0019453.1 mouse_genomes_project 11 126433752 126447529 + Tbcd protein_coding processed_transcript MGP_LPJ_T0028057.1 MGP_LPJ_G0017969.1 mouse_genomes_project 11 14824629 14829955 + C1d protein_coding processed_transcript MGP_LPJ_T0028058.1 MGP_LPJ_G0017969.1 mouse_genomes_project 11 14824642 14831339 + C1d protein_coding processed_transcript MGP_LPJ_T0028059.1 MGP_LPJ_G0017969.1 mouse_genomes_project 11 14824644 14837404 + MGP_LPJ_P0028059 C1d protein_coding protein_coding MGP_LPJ_T0028060.1 MGP_LPJ_G0017969.1 mouse_genomes_project 11 14824738 14834852 + MGP_LPJ_P0028060 C1d protein_coding protein_coding MGP_LPJ_T0028061.1 MGP_LPJ_G0017969.1 mouse_genomes_project 11 14830665 14834788 + C1d protein_coding processed_transcript MGP_LPJ_T0006208.1 MGP_LPJ_G0005185.1 mouse_genomes_project 11 20550257 20553163 - Gm12055 lincRNA lincRNA MGP_LPJ_T0000883.1 MGP_LPJ_G0000812.1 mouse_genomes_project 11 86128394 86130700 + TEC TEC MGP_LPJ_T0032008.1 MGP_LPJ_G0018956.1 mouse_genomes_project 11 101202639 101256531 + MGP_LPJ_P0032008 Cdk12 protein_coding protein_coding MGP_LPJ_T0032009.1 MGP_LPJ_G0018956.1 mouse_genomes_project 11 101202894 101251684 + MGP_LPJ_P0032009 Cdk12 protein_coding protein_coding MGP_LPJ_T0032010.1 MGP_LPJ_G0018956.1 mouse_genomes_project 11 101202915 101256014 + MGP_LPJ_P0032010 Cdk12 protein_coding protein_coding MGP_LPJ_T0032011.1 MGP_LPJ_G0018956.1 mouse_genomes_project 11 101223691 101229069 + Cdk12 protein_coding processed_transcript MGP_LPJ_T0032012.1 MGP_LPJ_G0018956.1 mouse_genomes_project 11 101245184 101283482 + Cdk12 protein_coding processed_transcript MGP_LPJ_T0032013.1 MGP_LPJ_G0018956.1 mouse_genomes_project 11 101268485 101273013 + Cdk12 protein_coding processed_transcript MGP_LPJ_T0003372.1 MGP_LPJ_G0003108.1 mouse_genomes_project 11 123091027 123101899 - Gm11747 antisense antisense MGP_LPJ_T0100185.1 MGP_LPJ_G0038448.1 mouse_genomes_project 11 120167806 120167941 + Gm23699 snoRNA snoRNA MGP_LPJ_T0031617.1 MGP_LPJ_G0018859.1 mouse_genomes_project 11 96968683 97026397 - MGP_LPJ_P0031617 Abcc3 protein_coding protein_coding MGP_LPJ_T0031618.1 MGP_LPJ_G0018859.1 mouse_genomes_project 11 96968686 97026397 - MGP_LPJ_P0031618 Abcc3 protein_coding protein_coding MGP_LPJ_T0031619.1 MGP_LPJ_G0018859.1 mouse_genomes_project 11 96969043 96976535 - Abcc3 protein_coding processed_transcript MGP_LPJ_T0031620.1 MGP_LPJ_G0018859.1 mouse_genomes_project 11 96992212 96996185 - Abcc3 protein_coding processed_transcript MGP_LPJ_T0031621.1 MGP_LPJ_G0018859.1 mouse_genomes_project 11 96992857 97026340 - Abcc3 protein_coding processed_transcript MGP_LPJ_T0031622.1 MGP_LPJ_G0018859.1 mouse_genomes_project 11 97002908 97026418 - Abcc3 protein_coding processed_transcript MGP_LPJ_T0012466.1 MGP_LPJ_G0010557.1 mouse_genomes_project 11 3897638 3898624 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000873.1 MGP_LPJ_G0000802.1 mouse_genomes_project 11 13575477 13576094 + TEC TEC MGP_LPJ_T0032635.1 MGP_LPJ_G0019133.1 mouse_genomes_project 11 105838195 105856254 - MGP_LPJ_P0032635 Slc4a1 protein_coding protein_coding MGP_LPJ_T0032636.1 MGP_LPJ_G0019133.1 mouse_genomes_project 11 105850087 105851574 - Slc4a1 protein_coding processed_transcript MGP_LPJ_T0032637.1 MGP_LPJ_G0019133.1 mouse_genomes_project 11 105851167 105854678 - Slc4a1 protein_coding processed_transcript MGP_LPJ_T0032638.1 MGP_LPJ_G0019133.1 mouse_genomes_project 11 105851200 105856221 - Slc4a1 protein_coding processed_transcript MGP_LPJ_T0032639.1 MGP_LPJ_G0019133.1 mouse_genomes_project 11 105852389 105857177 - Slc4a1 protein_coding processed_transcript MGP_LPJ_T0029192.1 MGP_LPJ_G0018275.1 mouse_genomes_project 11 58930213 58943188 + MGP_LPJ_P0029192 Trim58 protein_coding protein_coding MGP_LPJ_T0098903.1 MGP_LPJ_G0037166.1 mouse_genomes_project 11 53226031 53226138 + Gm25930 snRNA snRNA MGP_LPJ_T0098477.1 MGP_LPJ_G0036757.1 mouse_genomes_project 11 82199138 82200835 - C030013C21Rik sense_intronic sense_intronic MGP_LPJ_T0032155.1 MGP_LPJ_G0018992.1 mouse_genomes_project 11 102455796 102465176 - Krt26 protein_coding processed_transcript MGP_LPJ_T0032156.1 MGP_LPJ_G0018992.1 mouse_genomes_project 11 102455860 102465177 - MGP_LPJ_P0032156 Krt26 protein_coding protein_coding MGP_LPJ_T0028767.1 MGP_LPJ_G0018155.1 mouse_genomes_project 11 49809098 49842497 - MGP_LPJ_P0028767 Canx protein_coding protein_coding MGP_LPJ_T0028768.1 MGP_LPJ_G0018155.1 mouse_genomes_project 11 49809604 49842497 - MGP_LPJ_P0028768 Canx protein_coding protein_coding MGP_LPJ_T0028769.1 MGP_LPJ_G0018155.1 mouse_genomes_project 11 49811336 49814516 - Canx protein_coding processed_transcript MGP_LPJ_T0028770.1 MGP_LPJ_G0018155.1 mouse_genomes_project 11 49812501 49813457 - Canx protein_coding processed_transcript MGP_LPJ_T0028771.1 MGP_LPJ_G0018155.1 mouse_genomes_project 11 49813975 49816128 - Canx protein_coding processed_transcript MGP_LPJ_T0031159.1 MGP_LPJ_G0018744.1 mouse_genomes_project 11 85019158 85040796 + MGP_LPJ_P0031159 Slfn4 protein_coding protein_coding MGP_LPJ_T0031160.1 MGP_LPJ_G0018744.1 mouse_genomes_project 11 85019166 85040624 + MGP_LPJ_P0031160 Slfn4 protein_coding protein_coding MGP_LPJ_T0012484.1 MGP_LPJ_G0010575.1 mouse_genomes_project 11 12562534 12563634 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006267.1 MGP_LPJ_G0005236.1 mouse_genomes_project 11 60582416 60585428 - 4930412M03Rik lincRNA lincRNA MGP_LPJ_T0030083.1 MGP_LPJ_G0018483.1 mouse_genomes_project 11 71086138 71091364 - MGP_LPJ_P0030083 Acadvl protein_coding protein_coding MGP_LPJ_T0030084.1 MGP_LPJ_G0018483.1 mouse_genomes_project 11 71086144 71086867 - Acadvl protein_coding retained_intron MGP_LPJ_T0030085.1 MGP_LPJ_G0018483.1 mouse_genomes_project 11 71086199 71091343 - MGP_LPJ_P0030085 Acadvl protein_coding protein_coding MGP_LPJ_T0030086.1 MGP_LPJ_G0018483.1 mouse_genomes_project 11 71087177 71088530 - Acadvl protein_coding retained_intron MGP_LPJ_T0030087.1 MGP_LPJ_G0018483.1 mouse_genomes_project 11 71089144 71091333 - Acadvl protein_coding retained_intron MGP_LPJ_T0030088.1 MGP_LPJ_G0018483.1 mouse_genomes_project 11 71089998 71091367 - Acadvl protein_coding retained_intron MGP_LPJ_T0030089.1 MGP_LPJ_G0018483.1 mouse_genomes_project 11 71090073 71091355 - Acadvl protein_coding retained_intron MGP_LPJ_T0101254.1 MGP_LPJ_G0039497.1 mouse_genomes_project 11 111382784 111383159 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0017192.1 MGP_LPJ_G0015118.1 mouse_genomes_project 11 101071944 101072912 - Gm11632 processed_transcript processed_transcript MGP_LPJ_T0100147.1 MGP_LPJ_G0038410.1 mouse_genomes_project 11 56538728 56538824 + Gm22603 snoRNA snoRNA MGP_LPJ_T0100175.1 MGP_LPJ_G0038438.1 mouse_genomes_project 11 100751093 100751188 - Gm27326 snoRNA snoRNA MGP_LPJ_T0098908.1 MGP_LPJ_G0037171.1 mouse_genomes_project 11 61862830 61862937 + Gm25929 snRNA snRNA MGP_LPJ_T0003355.1 MGP_LPJ_G0003093.1 mouse_genomes_project 11 113789495 113795146 + Gm11683 antisense antisense MGP_LPJ_T0003359.1 MGP_LPJ_G0003096.1 mouse_genomes_project 11 119811950 119813679 - Ict1os antisense antisense MGP_LPJ_T0006263.1 MGP_LPJ_G0005232.1 mouse_genomes_project 11 58162600 58165530 - Gm12249 lincRNA lincRNA MGP_LPJ_T0033049.1 MGP_LPJ_G0019220.1 mouse_genomes_project 11 110985340 111010608 - MGP_LPJ_P0033049 Nol11 protein_coding protein_coding MGP_LPJ_T0033050.1 MGP_LPJ_G0019220.1 mouse_genomes_project 11 110985340 111010608 - MGP_LPJ_P0033050 Nol11 protein_coding protein_coding MGP_LPJ_T0033051.1 MGP_LPJ_G0019220.1 mouse_genomes_project 11 110986037 110988910 - Nol11 protein_coding processed_transcript MGP_LPJ_T0033052.1 MGP_LPJ_G0019220.1 mouse_genomes_project 11 110999933 111006048 - Nol11 protein_coding processed_transcript MGP_LPJ_T0033053.1 MGP_LPJ_G0019220.1 mouse_genomes_project 11 111007766 111010579 - Nol11 protein_coding processed_transcript MGP_LPJ_T0032093.1 MGP_LPJ_G0018976.1 mouse_genomes_project 11 101824833 101832243 - MGP_LPJ_P0032093 Nr1d1 protein_coding protein_coding MGP_LPJ_T0032094.1 MGP_LPJ_G0018976.1 mouse_genomes_project 11 101826258 101827338 - Nr1d1 protein_coding processed_transcript MGP_LPJ_T0098926.1 MGP_LPJ_G0037189.1 mouse_genomes_project 11 85149444 85149635 + Gm23444 snRNA snRNA MGP_LPJ_T0032194.1 MGP_LPJ_G0019028.1 mouse_genomes_project 11 103088992 103090206 + MGP_LPJ_P0032194 Krtap9-1 protein_coding protein_coding MGP_LPJ_T0031183.1 MGP_LPJ_G0018751.1 mouse_genomes_project 11 85324981 85328074 + MGP_LPJ_P0031183 1700020L24Rik protein_coding protein_coding MGP_LPJ_T0031184.1 MGP_LPJ_G0018751.1 mouse_genomes_project 11 85327127 85327669 + MGP_LPJ_P0031184 1700020L24Rik protein_coding protein_coding MGP_LPJ_T0030505.1 MGP_LPJ_G0018586.1 mouse_genomes_project 11 75261498 75262501 - MGP_LPJ_P0030505 Olfr399 protein_coding protein_coding MGP_LPJ_T0034029.1 MGP_LPJ_G0019420.1 mouse_genomes_project 11 125398040 125406964 - Sirt7 protein_coding retained_intron MGP_LPJ_T0034030.1 MGP_LPJ_G0019420.1 mouse_genomes_project 11 125398040 125407235 - Sirt7 protein_coding retained_intron MGP_LPJ_T0034031.1 MGP_LPJ_G0019420.1 mouse_genomes_project 11 125398040 125407009 - MGP_LPJ_P0034031 Sirt7 protein_coding protein_coding MGP_LPJ_T0034032.1 MGP_LPJ_G0019420.1 mouse_genomes_project 11 125398042 125406994 - Sirt7 protein_coding retained_intron MGP_LPJ_T0034033.1 MGP_LPJ_G0019420.1 mouse_genomes_project 11 125398056 125407015 - Sirt7 protein_coding retained_intron MGP_LPJ_T0034034.1 MGP_LPJ_G0019420.1 mouse_genomes_project 11 125398088 125400646 - MGP_LPJ_P0034034 Sirt7 protein_coding protein_coding MGP_LPJ_T0034035.1 MGP_LPJ_G0019420.1 mouse_genomes_project 11 125398438 125399039 - Sirt7 protein_coding processed_transcript MGP_LPJ_T0034036.1 MGP_LPJ_G0019420.1 mouse_genomes_project 11 125400667 125406985 - Sirt7 protein_coding processed_transcript MGP_LPJ_T0034037.1 MGP_LPJ_G0019420.1 mouse_genomes_project 11 125402864 125403677 - Sirt7 protein_coding retained_intron MGP_LPJ_T0034038.1 MGP_LPJ_G0019420.1 mouse_genomes_project 11 125405274 125406987 - Sirt7 protein_coding retained_intron MGP_LPJ_T0034039.1 MGP_LPJ_G0019420.1 mouse_genomes_project 11 125405984 125406979 - MGP_LPJ_P0034039 Sirt7 protein_coding protein_coding MGP_LPJ_T0009719.1 MGP_LPJ_G0007837.1 mouse_genomes_project 11 71833611 71833681 + Mir6925 miRNA miRNA MGP_LPJ_T0017182.1 MGP_LPJ_G0015112.1 mouse_genomes_project 11 99804914 99847394 + D030028A08Rik processed_transcript processed_transcript MGP_LPJ_T0017183.1 MGP_LPJ_G0015112.1 mouse_genomes_project 11 99838092 99858969 + D030028A08Rik processed_transcript processed_transcript MGP_LPJ_T0017184.1 MGP_LPJ_G0015112.1 mouse_genomes_project 11 99838116 99853975 + D030028A08Rik processed_transcript processed_transcript MGP_LPJ_T0017185.1 MGP_LPJ_G0015112.1 mouse_genomes_project 11 99838239 99857804 + D030028A08Rik processed_transcript processed_transcript MGP_LPJ_T0028713.1 MGP_LPJ_G0018142.1 mouse_genomes_project 11 49059152 49078711 + Flt4 protein_coding processed_transcript MGP_LPJ_T0028714.1 MGP_LPJ_G0018142.1 mouse_genomes_project 11 49059152 49115642 + MGP_LPJ_P0028714 Flt4 protein_coding protein_coding MGP_LPJ_T0003364.1 MGP_LPJ_G0003101.1 mouse_genomes_project 11 121047138 121050993 - Gm29292 antisense antisense MGP_LPJ_T0033300.1 MGP_LPJ_G0019279.1 mouse_genomes_project 11 119657840 119669346 - Fdxr protein_coding processed_transcript MGP_LPJ_T0033301.1 MGP_LPJ_G0019279.1 mouse_genomes_project 11 119657840 119669482 - MGP_LPJ_P0033301 Fdxr protein_coding protein_coding MGP_LPJ_T0033302.1 MGP_LPJ_G0019279.1 mouse_genomes_project 11 119658164 119658831 - Fdxr protein_coding processed_transcript MGP_LPJ_T0033303.1 MGP_LPJ_G0019279.1 mouse_genomes_project 11 119664258 119669156 - Fdxr protein_coding processed_transcript MGP_LPJ_T0028511.1 MGP_LPJ_G0018077.1 mouse_genomes_project 11 41370541 41590521 + MGP_LPJ_P0028511 Gabrb2 protein_coding protein_coding MGP_LPJ_T0028512.1 MGP_LPJ_G0018077.1 mouse_genomes_project 11 41370548 41373400 + Gabrb2 protein_coding processed_transcript MGP_LPJ_T0028513.1 MGP_LPJ_G0018077.1 mouse_genomes_project 11 41372040 41439911 + Gabrb2 protein_coding processed_transcript MGP_LPJ_T0028514.1 MGP_LPJ_G0018077.1 mouse_genomes_project 11 41372071 41487194 + Gabrb2 protein_coding processed_transcript MGP_LPJ_T0028515.1 MGP_LPJ_G0018077.1 mouse_genomes_project 11 41372111 41588384 + MGP_LPJ_P0028515 Gabrb2 protein_coding protein_coding MGP_LPJ_T0030625.1 MGP_LPJ_G0018619.1 mouse_genomes_project 11 76853451 76868004 + MGP_LPJ_P0030625 Scarf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0030626.1 MGP_LPJ_G0018619.1 mouse_genomes_project 11 76853454 76868006 + MGP_LPJ_P0030626 Scarf1 protein_coding protein_coding MGP_LPJ_T0003154.1 MGP_LPJ_G0002928.1 mouse_genomes_project 11 22056113 22069869 - 4930538E20Rik antisense antisense MGP_LPJ_T0003155.1 MGP_LPJ_G0002928.1 mouse_genomes_project 11 22062463 22069826 - 4930538E20Rik antisense antisense MGP_LPJ_T0030865.1 MGP_LPJ_G0018667.1 mouse_genomes_project 11 79675880 79682971 - Traf4 protein_coding retained_intron MGP_LPJ_T0030866.1 MGP_LPJ_G0018667.1 mouse_genomes_project 11 79676781 79682971 - MGP_LPJ_P0030866 Traf4 protein_coding protein_coding MGP_LPJ_T0030867.1 MGP_LPJ_G0018667.1 mouse_genomes_project 11 79678174 79682898 - Traf4 protein_coding retained_intron MGP_LPJ_T0006332.1 MGP_LPJ_G0005282.1 mouse_genomes_project 11 90999896 91001559 - Gm11493 lincRNA lincRNA MGP_LPJ_T0017151.1 MGP_LPJ_G0015096.1 mouse_genomes_project 11 73392814 73394975 + 1700051A21Rik processed_transcript processed_transcript MGP_LPJ_T0017152.1 MGP_LPJ_G0015096.1 mouse_genomes_project 11 73393226 73394957 + 1700051A21Rik processed_transcript processed_transcript MGP_LPJ_T0029841.1 MGP_LPJ_G0018432.1 mouse_genomes_project 11 70291217 70292221 - Cntrob protein_coding retained_intron MGP_LPJ_T0029842.1 MGP_LPJ_G0018432.1 mouse_genomes_project 11 70291217 70315872 - MGP_LPJ_P0029842 Cntrob protein_coding protein_coding MGP_LPJ_T0029843.1 MGP_LPJ_G0018432.1 mouse_genomes_project 11 70291217 70315872 - MGP_LPJ_P0029843 Cntrob protein_coding nonsense_mediated_decay MGP_LPJ_T0029844.1 MGP_LPJ_G0018432.1 mouse_genomes_project 11 70291270 70311406 - MGP_LPJ_P0029844 Cntrob protein_coding protein_coding MGP_LPJ_T0029845.1 MGP_LPJ_G0018432.1 mouse_genomes_project 11 70291431 70294873 - MGP_LPJ_P0029845 Cntrob protein_coding protein_coding MGP_LPJ_T0029846.1 MGP_LPJ_G0018432.1 mouse_genomes_project 11 70293247 70296690 - Cntrob protein_coding retained_intron MGP_LPJ_T0029847.1 MGP_LPJ_G0018432.1 mouse_genomes_project 11 70300123 70301152 - MGP_LPJ_P0029847 Cntrob protein_coding protein_coding MGP_LPJ_T0029848.1 MGP_LPJ_G0018432.1 mouse_genomes_project 11 70301753 70306838 - Cntrob protein_coding retained_intron MGP_LPJ_T0029849.1 MGP_LPJ_G0018432.1 mouse_genomes_project 11 70306476 70312171 - Cntrob protein_coding retained_intron MGP_LPJ_T0029850.1 MGP_LPJ_G0018432.1 mouse_genomes_project 11 70306892 70311424 - Cntrob protein_coding retained_intron MGP_LPJ_T0028461.1 MGP_LPJ_G0018065.1 mouse_genomes_project 11 34387312 34410148 + MGP_LPJ_P0028461 Pank3 protein_coding protein_coding MGP_LPJ_T0027947.1 MGP_LPJ_G0017940.1 mouse_genomes_project 11 3870733 3889310 + MGP_LPJ_P0027947 Ramp3 protein_coding protein_coding MGP_LPJ_T0027948.1 MGP_LPJ_G0017940.1 mouse_genomes_project 11 3870777 3889307 + Ramp3 protein_coding processed_transcript MGP_LPJ_T0012619.1 MGP_LPJ_G0010710.1 mouse_genomes_project 11 59351682 59352147 - processed_pseudogene processed_pseudogene MGP_LPJ_T0028275.1 MGP_LPJ_G0018018.1 mouse_genomes_project 11 27790459 27798528 + MGP_LPJ_P0028275 Mtif2 protein_coding protein_coding MGP_LPJ_T0028276.1 MGP_LPJ_G0018018.1 mouse_genomes_project 11 27790487 27799047 + MGP_LPJ_P0028276 Mtif2 protein_coding protein_coding MGP_LPJ_T0028277.1 MGP_LPJ_G0018018.1 mouse_genomes_project 11 27790498 27794281 + Mtif2 protein_coding processed_transcript MGP_LPJ_T0028278.1 MGP_LPJ_G0018018.1 mouse_genomes_project 11 27790499 27810416 + MGP_LPJ_P0028278 Mtif2 protein_coding protein_coding MGP_LPJ_T0028279.1 MGP_LPJ_G0018018.1 mouse_genomes_project 11 27790501 27805347 + MGP_LPJ_P0028279 Mtif2 protein_coding protein_coding MGP_LPJ_T0028280.1 MGP_LPJ_G0018018.1 mouse_genomes_project 11 27790508 27810384 + MGP_LPJ_P0028280 Mtif2 protein_coding protein_coding MGP_LPJ_T0028281.1 MGP_LPJ_G0018018.1 mouse_genomes_project 11 27798420 27805454 + MGP_LPJ_P0028281 Mtif2 protein_coding protein_coding MGP_LPJ_T0028282.1 MGP_LPJ_G0018018.1 mouse_genomes_project 11 27805152 27807203 + Mtif2 protein_coding processed_transcript MGP_LPJ_T0030443.1 MGP_LPJ_G0018557.1 mouse_genomes_project 11 74306975 74309783 - MGP_LPJ_P0030443 Gsg2 protein_coding protein_coding MGP_LPJ_T0027893.1 MGP_LPJ_G0017930.1 mouse_genomes_project 11 3471202 3543527 + MGP_LPJ_P0027893 Ogdh protein_coding unknown_likely_coding MGP_LPJ_T0027894.1 MGP_LPJ_G0017930.1 mouse_genomes_project 11 3471212 3544494 + MGP_LPJ_P0027894 Ogdh protein_coding protein_coding MGP_LPJ_T0027895.1 MGP_LPJ_G0017930.1 mouse_genomes_project 11 3471220 3480308 + Ogdh protein_coding retained_intron MGP_LPJ_T0027896.1 MGP_LPJ_G0017930.1 mouse_genomes_project 11 3471245 3544430 + MGP_LPJ_P0027896 Ogdh protein_coding protein_coding MGP_LPJ_T0027897.1 MGP_LPJ_G0017930.1 mouse_genomes_project 11 3471247 3544444 + MGP_LPJ_P0027897 Ogdh protein_coding protein_coding MGP_LPJ_T0027898.1 MGP_LPJ_G0017930.1 mouse_genomes_project 11 3471564 3498602 + MGP_LPJ_P0027898 Ogdh protein_coding protein_coding MGP_LPJ_T0027899.1 MGP_LPJ_G0017930.1 mouse_genomes_project 11 3471751 3498486 + MGP_LPJ_P0027899 Ogdh protein_coding protein_coding MGP_LPJ_T0027900.1 MGP_LPJ_G0017930.1 mouse_genomes_project 11 3472184 3544444 + MGP_LPJ_P0027900 Ogdh protein_coding protein_coding MGP_LPJ_T0028974.1 MGP_LPJ_G0018212.1 mouse_genomes_project 11 53502210 53565494 - MGP_LPJ_P0028974 Rad50 protein_coding protein_coding MGP_LPJ_T0028975.1 MGP_LPJ_G0018212.1 mouse_genomes_project 11 53529214 53565494 - MGP_LPJ_P0028975 Rad50 protein_coding nonsense_mediated_decay MGP_LPJ_T0028976.1 MGP_LPJ_G0018212.1 mouse_genomes_project 11 53534918 53536296 - Rad50 protein_coding processed_transcript MGP_LPJ_T0028977.1 MGP_LPJ_G0018212.1 mouse_genomes_project 11 53540560 53565470 - MGP_LPJ_P0028977 Rad50 protein_coding protein_coding MGP_LPJ_T0028978.1 MGP_LPJ_G0018212.1 mouse_genomes_project 11 53549237 53552318 - Rad50 protein_coding processed_transcript MGP_LPJ_T0033107.1 MGP_LPJ_G0019231.1 mouse_genomes_project 11 113085441 113090528 - MGP_LPJ_P0033107 E030025P04Rik protein_coding protein_coding MGP_LPJ_T0032750.1 MGP_LPJ_G0019154.1 mouse_genomes_project 11 106588611 106606670 + Nmt1 protein_coding processed_transcript MGP_LPJ_T0032751.1 MGP_LPJ_G0019154.1 mouse_genomes_project 11 106588767 106633129 + MGP_LPJ_P0032751 Nmt1 protein_coding protein_coding MGP_LPJ_T0032752.1 MGP_LPJ_G0019154.1 mouse_genomes_project 11 106589006 106620914 + Nmt1 protein_coding processed_transcript MGP_LPJ_T0029443.1 MGP_LPJ_G0018345.1 mouse_genomes_project 11 61829788 61871960 - MGP_LPJ_P0029443 Slc47a2 protein_coding protein_coding MGP_LPJ_T0029444.1 MGP_LPJ_G0018345.1 mouse_genomes_project 11 61832076 61871950 - MGP_LPJ_P0029444 Slc47a2 protein_coding protein_coding MGP_LPJ_T0029445.1 MGP_LPJ_G0018345.1 mouse_genomes_project 11 61864970 61871684 - Slc47a2 protein_coding processed_transcript MGP_LPJ_T0028602.1 MGP_LPJ_G0018103.1 mouse_genomes_project 11 45604405 45608338 + MGP_LPJ_P0028602 Med7 protein_coding protein_coding MGP_LPJ_T0028603.1 MGP_LPJ_G0018103.1 mouse_genomes_project 11 45604429 45608244 + MGP_LPJ_P0028603 Med7 protein_coding protein_coding MGP_LPJ_T0028604.1 MGP_LPJ_G0018103.1 mouse_genomes_project 11 45604432 45609007 + MGP_LPJ_P0028604 Med7 protein_coding protein_coding MGP_LPJ_T0028605.1 MGP_LPJ_G0018103.1 mouse_genomes_project 11 45604441 45610201 + MGP_LPJ_P0028605 Med7 protein_coding protein_coding MGP_LPJ_T0028606.1 MGP_LPJ_G0018103.1 mouse_genomes_project 11 45604451 45608580 + MGP_LPJ_P0028606 Med7 protein_coding protein_coding MGP_LPJ_T0028607.1 MGP_LPJ_G0018103.1 mouse_genomes_project 11 45604454 45610201 + MGP_LPJ_P0028607 Med7 protein_coding protein_coding MGP_LPJ_T0028608.1 MGP_LPJ_G0018103.1 mouse_genomes_project 11 45604458 45608530 + MGP_LPJ_P0028608 Med7 protein_coding protein_coding MGP_LPJ_T0028609.1 MGP_LPJ_G0018103.1 mouse_genomes_project 11 45604485 45607423 + Med7 protein_coding processed_transcript MGP_LPJ_T0028610.1 MGP_LPJ_G0018103.1 mouse_genomes_project 11 45607132 45608458 + MGP_LPJ_P0028610 Med7 protein_coding protein_coding MGP_LPJ_T0012598.1 MGP_LPJ_G0010689.1 mouse_genomes_project 11 53594976 53595329 + processed_pseudogene processed_pseudogene MGP_LPJ_T0033814.1 MGP_LPJ_G0019377.1 mouse_genomes_project 11 123816777 123910091 - MGP_LPJ_P0033814 Tbc1d16 protein_coding protein_coding MGP_LPJ_T0033815.1 MGP_LPJ_G0019377.1 mouse_genomes_project 11 123822620 123910038 - MGP_LPJ_P0033815 Tbc1d16 protein_coding unknown_likely_coding MGP_LPJ_T0033816.1 MGP_LPJ_G0019377.1 mouse_genomes_project 11 123887697 123900506 - MGP_LPJ_P0033816 Tbc1d16 protein_coding protein_coding MGP_LPJ_T0028308.1 MGP_LPJ_G0018023.1 mouse_genomes_project 11 28395096 28567418 - MGP_LPJ_P0028308 Sptbn1 protein_coding protein_coding MGP_LPJ_T0028309.1 MGP_LPJ_G0018023.1 mouse_genomes_project 11 28395097 28398952 - Sptbn1 protein_coding retained_intron MGP_LPJ_T0028310.1 MGP_LPJ_G0018023.1 mouse_genomes_project 11 28395097 28518173 - MGP_LPJ_P0028310 Sptbn1 protein_coding protein_coding MGP_LPJ_T0028311.1 MGP_LPJ_G0018023.1 mouse_genomes_project 11 28397214 28401313 - Sptbn1 protein_coding retained_intron MGP_LPJ_T0028312.1 MGP_LPJ_G0018023.1 mouse_genomes_project 11 28402487 28496653 - MGP_LPJ_P0028312 Sptbn1 protein_coding protein_coding MGP_LPJ_T0028313.1 MGP_LPJ_G0018023.1 mouse_genomes_project 11 28407099 28408588 - Sptbn1 protein_coding retained_intron MGP_LPJ_T0028314.1 MGP_LPJ_G0018023.1 mouse_genomes_project 11 28407176 28566463 - MGP_LPJ_P0028314 Sptbn1 protein_coding protein_coding MGP_LPJ_T0028315.1 MGP_LPJ_G0018023.1 mouse_genomes_project 11 28515016 28567424 - Sptbn1 protein_coding retained_intron MGP_LPJ_T0006202.1 MGP_LPJ_G0005179.1 mouse_genomes_project 11 17824237 17826139 - lincRNA lincRNA MGP_LPJ_T0034178.1 MGP_LPJ_G0019448.1 mouse_genomes_project 11 126075121 126131632 + MGP_LPJ_P0034178 Foxk2 protein_coding protein_coding MGP_LPJ_T0034179.1 MGP_LPJ_G0019448.1 mouse_genomes_project 11 126110576 126116922 + Foxk2 protein_coding processed_transcript MGP_LPJ_T0034180.1 MGP_LPJ_G0019448.1 mouse_genomes_project 11 126118334 126119663 + Foxk2 protein_coding retained_intron MGP_LPJ_T0009785.1 MGP_LPJ_G0007903.1 mouse_genomes_project 11 124755556 124755654 - Mir338 miRNA miRNA MGP_LPJ_T0028882.1 MGP_LPJ_G0018187.1 mouse_genomes_project 11 51659750 51670275 + MGP_LPJ_P0028882 Cdkn2aipnl protein_coding protein_coding MGP_LPJ_T0028883.1 MGP_LPJ_G0018187.1 mouse_genomes_project 11 51659981 51669185 + MGP_LPJ_P0028883 Cdkn2aipnl protein_coding nonsense_mediated_decay MGP_LPJ_T0012755.1 MGP_LPJ_G0010846.1 mouse_genomes_project 11 111170298 111170649 + processed_pseudogene processed_pseudogene MGP_LPJ_T0033023.1 MGP_LPJ_G0019216.1 mouse_genomes_project 11 110574141 110606601 + MGP_LPJ_P0033023 Cep95 protein_coding protein_coding MGP_LPJ_T0033024.1 MGP_LPJ_G0019216.1 mouse_genomes_project 11 110574164 110606594 + MGP_LPJ_P0033024 Cep95 protein_coding protein_coding MGP_LPJ_T0033025.1 MGP_LPJ_G0019216.1 mouse_genomes_project 11 110574176 110576158 + Cep95 protein_coding processed_transcript MGP_LPJ_T0033026.1 MGP_LPJ_G0019216.1 mouse_genomes_project 11 110600042 110601580 + Cep95 protein_coding processed_transcript MGP_LPJ_T0033027.1 MGP_LPJ_G0019216.1 mouse_genomes_project 11 110601963 110603519 + Cep95 protein_coding processed_transcript MGP_LPJ_T0033028.1 MGP_LPJ_G0019216.1 mouse_genomes_project 11 110605574 110606602 + Cep95 protein_coding processed_transcript MGP_LPJ_T0033029.1 MGP_LPJ_G0019216.1 mouse_genomes_project 11 110605619 110607671 + MGP_LPJ_P0033029 Cep95 protein_coding protein_coding MGP_LPJ_T0028136.1 MGP_LPJ_G0017988.1 mouse_genomes_project 11 20584836 20682257 - MGP_LPJ_P0028136 Gm12057 protein_coding nonsense_mediated_decay MGP_LPJ_T0003330.1 MGP_LPJ_G0003073.1 mouse_genomes_project 11 106942300 106943739 + Arhgap27os1 antisense antisense MGP_LPJ_T0006401.1 MGP_LPJ_G0005334.1 mouse_genomes_project 11 124677874 124681438 + Gm11766 lincRNA lincRNA MGP_LPJ_T0003189.1 MGP_LPJ_G0002960.1 mouse_genomes_project 11 54759024 54764112 + Lyrm7os antisense antisense MGP_LPJ_T0033744.1 MGP_LPJ_G0019361.1 mouse_genomes_project 11 122587006 122590114 - MGP_LPJ_P0033744 Socs3 protein_coding protein_coding MGP_LPJ_T0033745.1 MGP_LPJ_G0019361.1 mouse_genomes_project 11 122589802 122590975 - Socs3 protein_coding processed_transcript MGP_LPJ_T0033746.1 MGP_LPJ_G0019361.1 mouse_genomes_project 11 122589861 122590379 - Socs3 protein_coding processed_transcript MGP_LPJ_T0033194.1 MGP_LPJ_G0019253.1 mouse_genomes_project 11 117909394 117927338 + MGP_LPJ_P0033194 Cog1 protein_coding protein_coding MGP_LPJ_T0033195.1 MGP_LPJ_G0019253.1 mouse_genomes_project 11 117909553 117926757 + MGP_LPJ_P0033195 Cog1 protein_coding protein_coding MGP_LPJ_T0033196.1 MGP_LPJ_G0019253.1 mouse_genomes_project 11 117917140 117918708 + Cog1 protein_coding retained_intron MGP_LPJ_T0033197.1 MGP_LPJ_G0019253.1 mouse_genomes_project 11 117919833 117933751 + MGP_LPJ_P0033197 Cog1 protein_coding protein_coding MGP_LPJ_T0033198.1 MGP_LPJ_G0019253.1 mouse_genomes_project 11 117919970 117925987 + MGP_LPJ_P0033198 Cog1 protein_coding protein_coding MGP_LPJ_T0033199.1 MGP_LPJ_G0019253.1 mouse_genomes_project 11 117919988 117926023 + MGP_LPJ_P0033199 Cog1 protein_coding protein_coding MGP_LPJ_T0033200.1 MGP_LPJ_G0019253.1 mouse_genomes_project 11 117921046 117926758 + MGP_LPJ_P0033200 Cog1 protein_coding nonsense_mediated_decay MGP_LPJ_T0033201.1 MGP_LPJ_G0019253.1 mouse_genomes_project 11 117921751 117926758 + MGP_LPJ_P0033201 Cog1 protein_coding protein_coding MGP_LPJ_T0030119.1 MGP_LPJ_G0018489.1 mouse_genomes_project 11 71302972 71306634 + MGP_LPJ_P0030119 Slc16a11 protein_coding protein_coding MGP_LPJ_T0030120.1 MGP_LPJ_G0018489.1 mouse_genomes_project 11 71304130 71306633 + MGP_LPJ_P0030120 Slc16a11 protein_coding protein_coding MGP_LPJ_T0030121.1 MGP_LPJ_G0018489.1 mouse_genomes_project 11 71304219 71305075 + Slc16a11 protein_coding retained_intron MGP_LPJ_T0030122.1 MGP_LPJ_G0018489.1 mouse_genomes_project 11 71304300 71306634 + MGP_LPJ_P0030122 Slc16a11 protein_coding nonsense_mediated_decay MGP_LPJ_T0030123.1 MGP_LPJ_G0018489.1 mouse_genomes_project 11 71304335 71306635 + MGP_LPJ_P0030123 Slc16a11 protein_coding protein_coding MGP_LPJ_T0030124.1 MGP_LPJ_G0018489.1 mouse_genomes_project 11 71304339 71306638 + MGP_LPJ_P0030124 Slc16a11 protein_coding protein_coding MGP_LPJ_T0030125.1 MGP_LPJ_G0018489.1 mouse_genomes_project 11 71304339 71305753 + MGP_LPJ_P0030125 Slc16a11 protein_coding protein_coding MGP_LPJ_T0030126.1 MGP_LPJ_G0018489.1 mouse_genomes_project 11 71304341 71305208 + MGP_LPJ_P0030126 Slc16a11 protein_coding protein_coding MGP_LPJ_T0030127.1 MGP_LPJ_G0018489.1 mouse_genomes_project 11 71304342 71305896 + Slc16a11 protein_coding processed_transcript MGP_LPJ_T0030128.1 MGP_LPJ_G0018489.1 mouse_genomes_project 11 71304782 71305701 + Slc16a11 protein_coding retained_intron MGP_LPJ_T0030129.1 MGP_LPJ_G0018489.1 mouse_genomes_project 11 71305038 71306634 + Slc16a11 protein_coding retained_intron MGP_LPJ_T0006402.1 MGP_LPJ_G0005335.1 mouse_genomes_project 11 125256945 125259189 - Gm16755 lincRNA lincRNA MGP_LPJ_T0012602.1 MGP_LPJ_G0010693.1 mouse_genomes_project 11 54070931 54072062 + processed_pseudogene processed_pseudogene MGP_LPJ_T0030021.1 MGP_LPJ_G0018473.1 mouse_genomes_project 11 70983587 70986277 + MGP_LPJ_P0030021 Gps2 protein_coding protein_coding MGP_LPJ_T0030022.1 MGP_LPJ_G0018473.1 mouse_genomes_project 11 70983749 70986291 + MGP_LPJ_P0030022 Gps2 protein_coding protein_coding MGP_LPJ_T0030023.1 MGP_LPJ_G0018473.1 mouse_genomes_project 11 70983891 70986292 + MGP_LPJ_P0030023 Gps2 protein_coding protein_coding MGP_LPJ_T0030024.1 MGP_LPJ_G0018473.1 mouse_genomes_project 11 70984542 70985581 + Gps2 protein_coding processed_transcript MGP_LPJ_T0030025.1 MGP_LPJ_G0018473.1 mouse_genomes_project 11 70985741 70986257 + MGP_LPJ_P0030025 Gps2 protein_coding protein_coding MGP_LPJ_T0006199.1 MGP_LPJ_G0005177.1 mouse_genomes_project 11 16345708 16349880 - Gm28401 lincRNA lincRNA MGP_LPJ_T0006200.1 MGP_LPJ_G0005177.1 mouse_genomes_project 11 16345803 16349899 - Gm28401 lincRNA lincRNA MGP_LPJ_T0033212.1 MGP_LPJ_G0019257.1 mouse_genomes_project 11 117999995 118025090 - MGP_LPJ_P0033212 Cdc42ep4 protein_coding protein_coding MGP_LPJ_T0033213.1 MGP_LPJ_G0019257.1 mouse_genomes_project 11 117999997 118025653 - MGP_LPJ_P0033213 Cdc42ep4 protein_coding protein_coding MGP_LPJ_T0033214.1 MGP_LPJ_G0019257.1 mouse_genomes_project 11 118002128 118012464 - MGP_LPJ_P0033214 Cdc42ep4 protein_coding protein_coding MGP_LPJ_T0033215.1 MGP_LPJ_G0019257.1 mouse_genomes_project 11 118002450 118024926 - MGP_LPJ_P0033215 Cdc42ep4 protein_coding protein_coding MGP_LPJ_T0030441.1 MGP_LPJ_G0018556.1 mouse_genomes_project 11 74259064 74306323 + MGP_LPJ_P0030441 Itgae protein_coding protein_coding MGP_LPJ_T0030442.1 MGP_LPJ_G0018556.1 mouse_genomes_project 11 74259064 74321422 + MGP_LPJ_P0030442 Itgae protein_coding protein_coding MGP_LPJ_T0009755.1 MGP_LPJ_G0007873.1 mouse_genomes_project 11 100921337 100921407 - Gm22461 miRNA miRNA MGP_LPJ_T0009747.1 MGP_LPJ_G0007865.1 mouse_genomes_project 11 99112717 99112819 + Mir196a-1 miRNA miRNA MGP_LPJ_T0028517.1 MGP_LPJ_G0018079.1 mouse_genomes_project 11 42152625 42163666 + Atp10b protein_coding processed_transcript MGP_LPJ_T0028518.1 MGP_LPJ_G0018079.1 mouse_genomes_project 11 42154336 42265897 + MGP_LPJ_P0028518 Atp10b protein_coding protein_coding MGP_LPJ_T0028519.1 MGP_LPJ_G0018079.1 mouse_genomes_project 11 42158617 42205853 + Atp10b protein_coding processed_transcript MGP_LPJ_T0030527.1 MGP_LPJ_G0018597.1 mouse_genomes_project 11 75639865 75890686 - MGP_LPJ_P0030527 Rap1gap2 protein_coding protein_coding MGP_LPJ_T0030528.1 MGP_LPJ_G0018597.1 mouse_genomes_project 11 75639992 75890658 - MGP_LPJ_P0030528 Rap1gap2 protein_coding protein_coding MGP_LPJ_T0030529.1 MGP_LPJ_G0018597.1 mouse_genomes_project 11 75639993 75674191 - Rap1gap2 protein_coding processed_transcript MGP_LPJ_T0030530.1 MGP_LPJ_G0018597.1 mouse_genomes_project 11 75640895 75820343 - MGP_LPJ_P0030530 Rap1gap2 protein_coding unknown_likely_coding MGP_LPJ_T0030531.1 MGP_LPJ_G0018597.1 mouse_genomes_project 11 75703211 75890624 - MGP_LPJ_P0030531 Rap1gap2 protein_coding protein_coding MGP_LPJ_T0100174.1 MGP_LPJ_G0038437.1 mouse_genomes_project 11 98857912 98858127 + Gm24949 snoRNA snoRNA MGP_LPJ_T0101798.1 MGP_LPJ_G0039836.1 mouse_genomes_project 11 125553125 125554948 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0033041.1 MGP_LPJ_G0019219.1 mouse_genomes_project 11 110837555 110939470 - MGP_LPJ_P0033041 Bptf protein_coding protein_coding MGP_LPJ_T0033042.1 MGP_LPJ_G0019219.1 mouse_genomes_project 11 110837557 110939438 - MGP_LPJ_P0033042 Bptf protein_coding protein_coding MGP_LPJ_T0033043.1 MGP_LPJ_G0019219.1 mouse_genomes_project 11 110837557 110939438 - MGP_LPJ_P0033043 Bptf protein_coding protein_coding MGP_LPJ_T0033044.1 MGP_LPJ_G0019219.1 mouse_genomes_project 11 110839978 110849071 - Bptf protein_coding processed_transcript MGP_LPJ_T0033045.1 MGP_LPJ_G0019219.1 mouse_genomes_project 11 110840277 110939007 - MGP_LPJ_P0033045 Bptf protein_coding unknown_likely_coding MGP_LPJ_T0033046.1 MGP_LPJ_G0019219.1 mouse_genomes_project 11 110848414 110852639 - Bptf protein_coding processed_transcript MGP_LPJ_T0033047.1 MGP_LPJ_G0019219.1 mouse_genomes_project 11 110852029 110855751 - MGP_LPJ_P0033047 Bptf protein_coding protein_coding MGP_LPJ_T0033048.1 MGP_LPJ_G0019219.1 mouse_genomes_project 11 110863254 110870842 - MGP_LPJ_P0033048 Bptf protein_coding protein_coding MGP_LPJ_T0030417.1 MGP_LPJ_G0018551.1 mouse_genomes_project 11 73950388 74008518 + Zzef1 protein_coding retained_intron MGP_LPJ_T0030418.1 MGP_LPJ_G0018551.1 mouse_genomes_project 11 73950388 74085290 + MGP_LPJ_P0030418 Zzef1 protein_coding protein_coding MGP_LPJ_T0030419.1 MGP_LPJ_G0018551.1 mouse_genomes_project 11 73950416 74085288 + MGP_LPJ_P0030419 Zzef1 protein_coding protein_coding MGP_LPJ_T0030420.1 MGP_LPJ_G0018551.1 mouse_genomes_project 11 73993220 74082892 + MGP_LPJ_P0030420 Zzef1 protein_coding unknown_likely_coding MGP_LPJ_T0030421.1 MGP_LPJ_G0018551.1 mouse_genomes_project 11 73999210 74007883 + Zzef1 protein_coding processed_transcript MGP_LPJ_T0030422.1 MGP_LPJ_G0018551.1 mouse_genomes_project 11 74070474 74083985 + Zzef1 protein_coding retained_intron MGP_LPJ_T0030423.1 MGP_LPJ_G0018551.1 mouse_genomes_project 11 74073121 74077072 + Zzef1 protein_coding retained_intron MGP_LPJ_T0030424.1 MGP_LPJ_G0018551.1 mouse_genomes_project 11 74079017 74085290 + Zzef1 protein_coding retained_intron MGP_LPJ_T0028589.1 MGP_LPJ_G0018098.1 mouse_genomes_project 11 45297848 45316306 - MGP_LPJ_P0028589 Nipal4 protein_coding protein_coding MGP_LPJ_T0006368.1 MGP_LPJ_G0005309.1 mouse_genomes_project 11 114587355 114591492 + lincRNA lincRNA MGP_LPJ_T0098927.1 MGP_LPJ_G0037190.1 mouse_genomes_project 11 85411495 85411602 + Gm23247 snRNA snRNA MGP_LPJ_T0029878.1 MGP_LPJ_G0018439.1 mouse_genomes_project 11 70398517 70414702 - MGP_LPJ_P0029878 Kdm6b protein_coding unknown_likely_coding MGP_LPJ_T0029879.1 MGP_LPJ_G0018439.1 mouse_genomes_project 11 70401990 70402928 - Kdm6b protein_coding processed_transcript MGP_LPJ_T0032885.1 MGP_LPJ_G0019185.1 mouse_genomes_project 11 108864127 108982164 + MGP_LPJ_P0032885 Tlk2 protein_coding protein_coding MGP_LPJ_T0032886.1 MGP_LPJ_G0019185.1 mouse_genomes_project 11 108866066 108899739 + Tlk2 protein_coding retained_intron MGP_LPJ_T0032887.1 MGP_LPJ_G0019185.1 mouse_genomes_project 11 108866811 108980387 + MGP_LPJ_P0032887 Tlk2 protein_coding protein_coding MGP_LPJ_T0032888.1 MGP_LPJ_G0019185.1 mouse_genomes_project 11 108866923 108974667 + MGP_LPJ_P0032888 Tlk2 protein_coding protein_coding MGP_LPJ_T0032889.1 MGP_LPJ_G0019185.1 mouse_genomes_project 11 108867047 108980386 + MGP_LPJ_P0032889 Tlk2 protein_coding protein_coding MGP_LPJ_T0032890.1 MGP_LPJ_G0019185.1 mouse_genomes_project 11 108867112 108975081 + MGP_LPJ_P0032890 Tlk2 protein_coding protein_coding MGP_LPJ_T0032891.1 MGP_LPJ_G0019185.1 mouse_genomes_project 11 108867129 108980386 + MGP_LPJ_P0032891 Tlk2 protein_coding nonsense_mediated_decay MGP_LPJ_T0032892.1 MGP_LPJ_G0019185.1 mouse_genomes_project 11 108867347 108900442 + MGP_LPJ_P0032892 Tlk2 protein_coding protein_coding MGP_LPJ_T0032893.1 MGP_LPJ_G0019185.1 mouse_genomes_project 11 108897299 108935370 + Tlk2 protein_coding retained_intron MGP_LPJ_T0032894.1 MGP_LPJ_G0019185.1 mouse_genomes_project 11 108898736 108944211 + MGP_LPJ_P0032894 Tlk2 protein_coding protein_coding MGP_LPJ_T0032895.1 MGP_LPJ_G0019185.1 mouse_genomes_project 11 108941477 108942394 + Tlk2 protein_coding retained_intron MGP_LPJ_T0032896.1 MGP_LPJ_G0019185.1 mouse_genomes_project 11 108948748 108968647 + Tlk2 protein_coding processed_transcript MGP_LPJ_T0032157.1 MGP_LPJ_G0018993.1 mouse_genomes_project 11 102472820 102478345 - MGP_LPJ_P0032157 Krt27 protein_coding protein_coding MGP_LPJ_T0029385.1 MGP_LPJ_G0018333.1 mouse_genomes_project 11 61235292 61273461 - MGP_LPJ_P0029385 Top3a protein_coding protein_coding MGP_LPJ_T0029386.1 MGP_LPJ_G0018333.1 mouse_genomes_project 11 61235293 61273383 - MGP_LPJ_P0029386 Top3a protein_coding protein_coding MGP_LPJ_T0029387.1 MGP_LPJ_G0018333.1 mouse_genomes_project 11 61235758 61273197 - MGP_LPJ_P0029387 Top3a protein_coding unknown_likely_coding MGP_LPJ_T0029388.1 MGP_LPJ_G0018333.1 mouse_genomes_project 11 61235758 61273122 - MGP_LPJ_P0029388 Top3a protein_coding unknown_likely_coding MGP_LPJ_T0029389.1 MGP_LPJ_G0018333.1 mouse_genomes_project 11 61237125 61273361 - MGP_LPJ_P0029389 Top3a protein_coding protein_coding MGP_LPJ_T0029390.1 MGP_LPJ_G0018333.1 mouse_genomes_project 11 61237468 61273360 - MGP_LPJ_P0029390 Top3a protein_coding protein_coding MGP_LPJ_T0029391.1 MGP_LPJ_G0018333.1 mouse_genomes_project 11 61244703 61247926 - Top3a protein_coding retained_intron MGP_LPJ_T0029392.1 MGP_LPJ_G0018333.1 mouse_genomes_project 11 61257218 61273395 - MGP_LPJ_P0029392 Top3a protein_coding protein_coding MGP_LPJ_T0030619.1 MGP_LPJ_G0018617.1 mouse_genomes_project 11 76824082 76849324 + MGP_LPJ_P0030619 Prpf8 protein_coding protein_coding MGP_LPJ_T0030620.1 MGP_LPJ_G0018617.1 mouse_genomes_project 11 76824086 76849326 + MGP_LPJ_P0030620 Prpf8 protein_coding protein_coding MGP_LPJ_T0030621.1 MGP_LPJ_G0018617.1 mouse_genomes_project 11 76824121 76833077 + MGP_LPJ_P0030621 Prpf8 protein_coding protein_coding MGP_LPJ_T0030622.1 MGP_LPJ_G0018617.1 mouse_genomes_project 11 76829502 76831192 + Prpf8 protein_coding retained_intron MGP_LPJ_T0032814.1 MGP_LPJ_G0019167.1 mouse_genomes_project 11 107237387 107238397 + MGP_LPJ_P0032814 Rprml protein_coding protein_coding MGP_LPJ_T0027660.1 MGP_LPJ_G0017876.1 mouse_genomes_project 11 900103 908887 - MGP_LPJ_P0027660 Slc35e4 protein_coding protein_coding MGP_LPJ_T0027661.1 MGP_LPJ_G0017876.1 mouse_genomes_project 11 900104 908887 - MGP_LPJ_P0027661 Slc35e4 protein_coding protein_coding MGP_LPJ_T0031101.1 MGP_LPJ_G0018725.1 mouse_genomes_project 11 83814056 83815870 + MGP_LPJ_P0031101 Ccl7 protein_coding protein_coding MGP_LPJ_T0030438.1 MGP_LPJ_G0018555.1 mouse_genomes_project 11 74211444 74257799 + MGP_LPJ_P0030438 Ncbp3 protein_coding protein_coding MGP_LPJ_T0030439.1 MGP_LPJ_G0018555.1 mouse_genomes_project 11 74211531 74223189 + Ncbp3 protein_coding retained_intron MGP_LPJ_T0030440.1 MGP_LPJ_G0018555.1 mouse_genomes_project 11 74211534 74220410 + Ncbp3 protein_coding retained_intron MGP_LPJ_T0100152.1 MGP_LPJ_G0038415.1 mouse_genomes_project 11 63207539 63207611 + Snord65 snoRNA snoRNA MGP_LPJ_T0012637.1 MGP_LPJ_G0010728.1 mouse_genomes_project 11 63879794 63880027 - processed_pseudogene processed_pseudogene MGP_LPJ_T0033182.1 MGP_LPJ_G0019250.1 mouse_genomes_project 11 116972211 116977753 + MGP_LPJ_P0033182 Sox9 protein_coding protein_coding MGP_LPJ_T0003229.1 MGP_LPJ_G0002993.1 mouse_genomes_project 11 67725807 67771021 - Gm12298 antisense antisense MGP_LPJ_T0100129.1 MGP_LPJ_G0038392.1 mouse_genomes_project 11 18569178 18569307 - Gm22807 snoRNA snoRNA MGP_LPJ_T0017080.1 MGP_LPJ_G0015059.1 mouse_genomes_project 11 261268 289594 - Gm12592 processed_transcript processed_transcript MGP_LPJ_T0028032.1 MGP_LPJ_G0017961.1 mouse_genomes_project 11 14033042 14040986 - MGP_LPJ_P0028032 Sec61g protein_coding protein_coding MGP_LPJ_T0028033.1 MGP_LPJ_G0017961.1 mouse_genomes_project 11 14033900 14040680 - MGP_LPJ_P0028033 Sec61g protein_coding protein_coding MGP_LPJ_T0028034.1 MGP_LPJ_G0017961.1 mouse_genomes_project 11 14034151 14040986 - MGP_LPJ_P0028034 Sec61g protein_coding protein_coding MGP_LPJ_T0028035.1 MGP_LPJ_G0017961.1 mouse_genomes_project 11 14034151 14040986 - MGP_LPJ_P0028035 Sec61g protein_coding protein_coding MGP_LPJ_T0028036.1 MGP_LPJ_G0017961.1 mouse_genomes_project 11 14034156 14037558 - Sec61g protein_coding retained_intron MGP_LPJ_T0028037.1 MGP_LPJ_G0017961.1 mouse_genomes_project 11 14034164 14040583 - MGP_LPJ_P0028037 Sec61g protein_coding protein_coding MGP_LPJ_T0028038.1 MGP_LPJ_G0017961.1 mouse_genomes_project 11 14038605 14040646 - Sec61g protein_coding retained_intron MGP_LPJ_T0012570.1 MGP_LPJ_G0010661.1 mouse_genomes_project 11 42637549 42638750 - processed_pseudogene processed_pseudogene MGP_LPJ_T0032225.1 MGP_LPJ_G0019050.1 mouse_genomes_project 11 103618435 103620597 + MGP_LPJ_P0032225 Eif1 protein_coding protein_coding MGP_LPJ_T0032226.1 MGP_LPJ_G0019050.1 mouse_genomes_project 11 103618681 103619462 + MGP_LPJ_P0032226 Eif1 protein_coding protein_coding MGP_LPJ_T0032227.1 MGP_LPJ_G0019050.1 mouse_genomes_project 11 103618990 103620231 + Eif1 protein_coding processed_transcript MGP_LPJ_T0032228.1 MGP_LPJ_G0019050.1 mouse_genomes_project 11 103619356 103620516 + Eif1 protein_coding processed_transcript MGP_LPJ_T0032200.1 MGP_LPJ_G0019034.1 mouse_genomes_project 11 103247180 103249068 - MGP_LPJ_P0032200 Krtap16-1 protein_coding protein_coding MGP_LPJ_T0003249.1 MGP_LPJ_G0003009.1 mouse_genomes_project 11 78475864 78476824 - Gm12343 antisense antisense MGP_LPJ_T0032183.1 MGP_LPJ_G0019017.1 mouse_genomes_project 11 102845012 102845842 - MGP_LPJ_P0032183 Krtap4-6 protein_coding protein_coding MGP_LPJ_T0006397.1 MGP_LPJ_G0005330.1 mouse_genomes_project 11 123778072 123782956 - Gm11754 lincRNA lincRNA MGP_LPJ_T0003163.1 MGP_LPJ_G0002936.1 mouse_genomes_project 11 34936667 34940479 + antisense antisense MGP_LPJ_T0032015.1 MGP_LPJ_G0018958.1 mouse_genomes_project 11 101366048 101374768 + MGP_LPJ_P0032015 Ppp1r1b protein_coding protein_coding MGP_LPJ_T0032016.1 MGP_LPJ_G0018958.1 mouse_genomes_project 11 101367809 101374753 + Ppp1r1b protein_coding retained_intron MGP_LPJ_T0032017.1 MGP_LPJ_G0018958.1 mouse_genomes_project 11 101368169 101374356 + Ppp1r1b protein_coding retained_intron MGP_LPJ_T0032018.1 MGP_LPJ_G0018958.1 mouse_genomes_project 11 101368443 101374251 + Ppp1r1b protein_coding processed_transcript MGP_LPJ_T0032019.1 MGP_LPJ_G0018958.1 mouse_genomes_project 11 101371550 101374068 + Ppp1r1b protein_coding processed_transcript MGP_LPJ_T0029754.1 MGP_LPJ_G0018412.1 mouse_genomes_project 11 69771722 69805974 - MGP_LPJ_P0029754 Ndel1 protein_coding unknown_likely_coding MGP_LPJ_T0029755.1 MGP_LPJ_G0018412.1 mouse_genomes_project 11 69772397 69790866 - Ndel1 protein_coding processed_transcript MGP_LPJ_T0029756.1 MGP_LPJ_G0018412.1 mouse_genomes_project 11 69780367 69831740 - MGP_LPJ_P0029756 Ndel1 protein_coding protein_coding MGP_LPJ_T0029757.1 MGP_LPJ_G0018412.1 mouse_genomes_project 11 69780379 69806373 - MGP_LPJ_P0029757 Ndel1 protein_coding protein_coding MGP_LPJ_T0029758.1 MGP_LPJ_G0018412.1 mouse_genomes_project 11 69787266 69816035 - Ndel1 protein_coding processed_transcript MGP_LPJ_T0029759.1 MGP_LPJ_G0018412.1 mouse_genomes_project 11 69790859 69822291 - Ndel1 protein_coding processed_transcript MGP_LPJ_T0012681.1 MGP_LPJ_G0010772.1 mouse_genomes_project 11 80974617 80975591 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100155.1 MGP_LPJ_G0038418.1 mouse_genomes_project 11 70691345 70691488 - Gm24029 snoRNA snoRNA MGP_LPJ_T0003389.1 MGP_LPJ_G0003121.1 mouse_genomes_project 11 126674917 126675575 - Gm15643 antisense antisense MGP_LPJ_T0006219.1 MGP_LPJ_G0005195.1 mouse_genomes_project 11 23149159 23291057 + 4933427E13Rik lincRNA lincRNA MGP_LPJ_T0006221.1 MGP_LPJ_G0005195.1 mouse_genomes_project 11 23249334 23291061 + 4933427E13Rik lincRNA lincRNA MGP_LPJ_T0006222.1 MGP_LPJ_G0005195.1 mouse_genomes_project 11 23249363 23253980 + 4933427E13Rik lincRNA lincRNA MGP_LPJ_T0006223.1 MGP_LPJ_G0005195.1 mouse_genomes_project 11 23253218 23282110 + 4933427E13Rik lincRNA lincRNA MGP_LPJ_T0030524.1 MGP_LPJ_G0018595.1 mouse_genomes_project 11 75596855 75597904 - MGP_LPJ_P0030524 Olfr411 protein_coding protein_coding MGP_LPJ_T0030525.1 MGP_LPJ_G0018595.1 mouse_genomes_project 11 75597123 75602847 - MGP_LPJ_P0030525 Olfr411 protein_coding protein_coding MGP_LPJ_T0032820.1 MGP_LPJ_G0019171.1 mouse_genomes_project 11 107418469 107556785 - MGP_LPJ_P0032820 Nsf protein_coding protein_coding MGP_LPJ_T0032821.1 MGP_LPJ_G0019171.1 mouse_genomes_project 11 107419612 107424119 - Nsf protein_coding retained_intron MGP_LPJ_T0032822.1 MGP_LPJ_G0019171.1 mouse_genomes_project 11 107419621 107420788 - Nsf protein_coding retained_intron MGP_LPJ_T0032823.1 MGP_LPJ_G0019171.1 mouse_genomes_project 11 107446049 107469917 - Nsf protein_coding retained_intron MGP_LPJ_T0032824.1 MGP_LPJ_G0019171.1 mouse_genomes_project 11 107459867 107470039 - Nsf protein_coding retained_intron MGP_LPJ_T0032825.1 MGP_LPJ_G0019171.1 mouse_genomes_project 11 107478212 107556753 - Nsf protein_coding retained_intron MGP_LPJ_T0032826.1 MGP_LPJ_G0019171.1 mouse_genomes_project 11 107507352 107556753 - Nsf protein_coding retained_intron MGP_LPJ_T0032827.1 MGP_LPJ_G0019171.1 mouse_genomes_project 11 107508379 107540891 - MGP_LPJ_P0032827 Nsf protein_coding protein_coding MGP_LPJ_T0032828.1 MGP_LPJ_G0019171.1 mouse_genomes_project 11 107508483 107525962 - Nsf protein_coding retained_intron MGP_LPJ_T0032829.1 MGP_LPJ_G0019171.1 mouse_genomes_project 11 107525958 107540891 - MGP_LPJ_P0032829 Nsf protein_coding protein_coding MGP_LPJ_T0031010.1 MGP_LPJ_G0018703.1 mouse_genomes_project 11 81146718 81150747 - MGP_LPJ_P0031010 Evi2a protein_coding protein_coding MGP_LPJ_T0031011.1 MGP_LPJ_G0018703.1 mouse_genomes_project 11 81146726 81150768 - MGP_LPJ_P0031011 Evi2a protein_coding protein_coding MGP_LPJ_T0031012.1 MGP_LPJ_G0018703.1 mouse_genomes_project 11 81147115 81147934 - MGP_LPJ_P0031012 Evi2a protein_coding protein_coding MGP_LPJ_T0031013.1 MGP_LPJ_G0018703.1 mouse_genomes_project 11 81147843 81148305 - MGP_LPJ_P0031013 Evi2a protein_coding protein_coding MGP_LPJ_T0031014.1 MGP_LPJ_G0018703.1 mouse_genomes_project 11 81148226 81150768 - Evi2a protein_coding processed_transcript MGP_LPJ_T0032049.1 MGP_LPJ_G0018967.1 mouse_genomes_project 11 101582990 101590552 + MGP_LPJ_P0032049 Zpbp2 protein_coding protein_coding MGP_LPJ_T0032050.1 MGP_LPJ_G0018967.1 mouse_genomes_project 11 101583023 101590552 + MGP_LPJ_P0032050 Zpbp2 protein_coding protein_coding MGP_LPJ_T0032051.1 MGP_LPJ_G0018967.1 mouse_genomes_project 11 101583043 101590543 + MGP_LPJ_P0032051 Zpbp2 protein_coding protein_coding MGP_LPJ_T0032052.1 MGP_LPJ_G0018967.1 mouse_genomes_project 11 101583045 101590543 + MGP_LPJ_P0032052 Zpbp2 protein_coding protein_coding MGP_LPJ_T0032053.1 MGP_LPJ_G0018967.1 mouse_genomes_project 11 101583071 101590420 + MGP_LPJ_P0032053 Zpbp2 protein_coding protein_coding MGP_LPJ_T0032054.1 MGP_LPJ_G0018967.1 mouse_genomes_project 11 101587329 101590272 + Zpbp2 protein_coding processed_transcript MGP_LPJ_T0033191.1 MGP_LPJ_G0019252.1 mouse_genomes_project 11 117879658 117886354 + MGP_LPJ_P0033191 Sstr2 protein_coding protein_coding MGP_LPJ_T0033192.1 MGP_LPJ_G0019252.1 mouse_genomes_project 11 117879792 117886220 + MGP_LPJ_P0033192 Sstr2 protein_coding protein_coding MGP_LPJ_T0033193.1 MGP_LPJ_G0019252.1 mouse_genomes_project 11 117884581 117885961 + MGP_LPJ_P0033193 Sstr2 protein_coding protein_coding MGP_LPJ_T0100126.1 MGP_LPJ_G0038389.1 mouse_genomes_project 11 10085325 10085467 + Gm22156 snoRNA snoRNA MGP_LPJ_T0003348.1 MGP_LPJ_G0003089.1 mouse_genomes_project 11 112869402 112872840 - Gm11670 antisense antisense MGP_LPJ_T0033751.1 MGP_LPJ_G0019363.1 mouse_genomes_project 11 122645867 122760545 - MGP_LPJ_P0033751 Dnah17 protein_coding protein_coding MGP_LPJ_T0033752.1 MGP_LPJ_G0019363.1 mouse_genomes_project 11 122645867 122760545 - MGP_LPJ_P0033752 Dnah17 protein_coding protein_coding MGP_LPJ_T0033753.1 MGP_LPJ_G0019363.1 mouse_genomes_project 11 122647224 122734176 - MGP_LPJ_P0033753 Dnah17 protein_coding protein_coding MGP_LPJ_T0033754.1 MGP_LPJ_G0019363.1 mouse_genomes_project 11 122715079 122723204 - MGP_LPJ_P0033754 Dnah17 protein_coding protein_coding MGP_LPJ_T0033755.1 MGP_LPJ_G0019363.1 mouse_genomes_project 11 122743567 122757014 - MGP_LPJ_P0033755 Dnah17 protein_coding protein_coding MGP_LPJ_T0003388.1 MGP_LPJ_G0003120.1 mouse_genomes_project 11 125837262 125862956 + Gm11775 antisense antisense MGP_LPJ_T0028712.1 MGP_LPJ_G0018141.1 mouse_genomes_project 11 49006064 49009487 + MGP_LPJ_P0028712 protein_coding protein_coding MGP_LPJ_T0031541.1 MGP_LPJ_G0018843.1 mouse_genomes_project 11 92832106 93000716 - MGP_LPJ_P0031541 Stxbp4 protein_coding protein_coding MGP_LPJ_T0031542.1 MGP_LPJ_G0018843.1 mouse_genomes_project 11 92847675 92907257 - MGP_LPJ_P0031542 Stxbp4 protein_coding protein_coding MGP_LPJ_T0031543.1 MGP_LPJ_G0018843.1 mouse_genomes_project 11 92890899 93000694 - MGP_LPJ_P0031543 Stxbp4 protein_coding protein_coding MGP_LPJ_T0031544.1 MGP_LPJ_G0018843.1 mouse_genomes_project 11 92954165 93000697 - MGP_LPJ_P0031544 Stxbp4 protein_coding protein_coding MGP_LPJ_T0031545.1 MGP_LPJ_G0018843.1 mouse_genomes_project 11 92958255 93000708 - MGP_LPJ_P0031545 Stxbp4 protein_coding protein_coding MGP_LPJ_T0031546.1 MGP_LPJ_G0018843.1 mouse_genomes_project 11 92977696 92993568 - MGP_LPJ_P0031546 Stxbp4 protein_coding protein_coding MGP_LPJ_T0031547.1 MGP_LPJ_G0018843.1 mouse_genomes_project 11 92992861 93000705 - Stxbp4 protein_coding processed_transcript MGP_LPJ_T0030755.1 MGP_LPJ_G0018646.1 mouse_genomes_project 11 78513277 78552004 - MGP_LPJ_P0030755 Nsrp1 protein_coding protein_coding MGP_LPJ_T0030756.1 MGP_LPJ_G0018646.1 mouse_genomes_project 11 78521131 78551606 - MGP_LPJ_P0030756 Nsrp1 protein_coding protein_coding MGP_LPJ_T0030757.1 MGP_LPJ_G0018646.1 mouse_genomes_project 11 78524990 78552004 - Nsrp1 protein_coding processed_transcript MGP_LPJ_T0034014.1 MGP_LPJ_G0019418.1 mouse_genomes_project 11 125385586 125386203 + MGP_LPJ_P0034014 Npb protein_coding protein_coding MGP_LPJ_T0034015.1 MGP_LPJ_G0019418.1 mouse_genomes_project 11 125385586 125386203 + MGP_LPJ_P0034015 Npb protein_coding protein_coding MGP_LPJ_T0034016.1 MGP_LPJ_G0019418.1 mouse_genomes_project 11 125385614 125386143 + MGP_LPJ_P0034016 Npb protein_coding protein_coding MGP_LPJ_T0033030.1 MGP_LPJ_G0019217.1 mouse_genomes_project 11 110607806 110710685 - MGP_LPJ_P0033030 Smurf2 protein_coding protein_coding MGP_LPJ_T0033031.1 MGP_LPJ_G0019217.1 mouse_genomes_project 11 110609765 110710245 - Smurf2 protein_coding processed_transcript MGP_LPJ_T0033032.1 MGP_LPJ_G0019217.1 mouse_genomes_project 11 110609765 110710440 - MGP_LPJ_P0033032 Smurf2 protein_coding protein_coding MGP_LPJ_T0033033.1 MGP_LPJ_G0019217.1 mouse_genomes_project 11 110610353 110710329 - MGP_LPJ_P0033033 Smurf2 protein_coding protein_coding MGP_LPJ_T0033034.1 MGP_LPJ_G0019217.1 mouse_genomes_project 11 110612930 110617219 - Smurf2 protein_coding processed_transcript MGP_LPJ_T0033035.1 MGP_LPJ_G0019217.1 mouse_genomes_project 11 110618800 110627501 - Smurf2 protein_coding processed_transcript MGP_LPJ_T0009689.1 MGP_LPJ_G0007807.1 mouse_genomes_project 11 49735762 49735824 + Mir6919 miRNA miRNA MGP_LPJ_T0032288.1 MGP_LPJ_G0019063.1 mouse_genomes_project 11 103947544 103955893 + MGP_LPJ_P0032288 Nkiras2 protein_coding protein_coding MGP_LPJ_T0032289.1 MGP_LPJ_G0019063.1 mouse_genomes_project 11 103948583 103955510 + MGP_LPJ_P0032289 Nkiras2 protein_coding protein_coding MGP_LPJ_T0032290.1 MGP_LPJ_G0019063.1 mouse_genomes_project 11 103951173 103956701 + MGP_LPJ_P0032290 Nkiras2 protein_coding protein_coding MGP_LPJ_T0032291.1 MGP_LPJ_G0019063.1 mouse_genomes_project 11 103951217 103953972 + Nkiras2 protein_coding processed_transcript MGP_LPJ_T0032292.1 MGP_LPJ_G0019063.1 mouse_genomes_project 11 103951245 103955680 + Nkiras2 protein_coding processed_transcript MGP_LPJ_T0032293.1 MGP_LPJ_G0019063.1 mouse_genomes_project 11 103951308 103955211 + MGP_LPJ_P0032293 Nkiras2 protein_coding protein_coding MGP_LPJ_T0031157.1 MGP_LPJ_G0018742.1 mouse_genomes_project 11 84884946 84891493 + MGP_LPJ_P0031157 Slfn2 protein_coding protein_coding MGP_LPJ_T0033826.1 MGP_LPJ_G0019379.1 mouse_genomes_project 11 123951487 123972395 + MGP_LPJ_P0033826 Gaa protein_coding protein_coding MGP_LPJ_T0033827.1 MGP_LPJ_G0019379.1 mouse_genomes_project 11 123951626 123972395 + MGP_LPJ_P0033827 Gaa protein_coding protein_coding MGP_LPJ_T0033828.1 MGP_LPJ_G0019379.1 mouse_genomes_project 11 123951628 123960443 + MGP_LPJ_P0033828 Gaa protein_coding protein_coding MGP_LPJ_T0033829.1 MGP_LPJ_G0019379.1 mouse_genomes_project 11 123954129 123962130 + Gaa protein_coding processed_transcript MGP_LPJ_T0033830.1 MGP_LPJ_G0019379.1 mouse_genomes_project 11 123961558 123965368 + MGP_LPJ_P0033830 Gaa protein_coding protein_coding MGP_LPJ_T0033831.1 MGP_LPJ_G0019379.1 mouse_genomes_project 11 123961846 123962626 + MGP_LPJ_P0033831 Gaa protein_coding protein_coding MGP_LPJ_T0033832.1 MGP_LPJ_G0019379.1 mouse_genomes_project 11 123964751 123968485 + MGP_LPJ_P0033832 Gaa protein_coding protein_coding MGP_LPJ_T0033833.1 MGP_LPJ_G0019379.1 mouse_genomes_project 11 123965921 123966536 + Gaa protein_coding processed_transcript MGP_LPJ_T0030108.1 MGP_LPJ_G0018486.1 mouse_genomes_project 11 71180859 71193511 + MGP_LPJ_P0030108 Asgr2 protein_coding protein_coding MGP_LPJ_T0030109.1 MGP_LPJ_G0018486.1 mouse_genomes_project 11 71181181 71193981 + MGP_LPJ_P0030109 Asgr2 protein_coding protein_coding MGP_LPJ_T0030110.1 MGP_LPJ_G0018486.1 mouse_genomes_project 11 71185803 71193956 + Asgr2 protein_coding retained_intron MGP_LPJ_T0028189.1 MGP_LPJ_G0017999.1 mouse_genomes_project 11 21419899 21493612 - MGP_LPJ_P0028189 0610010F05Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0028190.1 MGP_LPJ_G0017999.1 mouse_genomes_project 11 21429523 21489090 - MGP_LPJ_P0028190 0610010F05Rik protein_coding protein_coding MGP_LPJ_T0028191.1 MGP_LPJ_G0017999.1 mouse_genomes_project 11 21430046 21493606 - MGP_LPJ_P0028191 0610010F05Rik protein_coding protein_coding MGP_LPJ_T0028192.1 MGP_LPJ_G0017999.1 mouse_genomes_project 11 21430060 21493702 - MGP_LPJ_P0028192 0610010F05Rik protein_coding protein_coding MGP_LPJ_T0028193.1 MGP_LPJ_G0017999.1 mouse_genomes_project 11 21430060 21493694 - MGP_LPJ_P0028193 0610010F05Rik protein_coding protein_coding MGP_LPJ_T0028194.1 MGP_LPJ_G0017999.1 mouse_genomes_project 11 21432902 21453211 - MGP_LPJ_P0028194 0610010F05Rik protein_coding protein_coding MGP_LPJ_T0028195.1 MGP_LPJ_G0017999.1 mouse_genomes_project 11 21488939 21493694 - MGP_LPJ_P0028195 0610010F05Rik protein_coding protein_coding MGP_LPJ_T0030998.1 MGP_LPJ_G0018698.1 mouse_genomes_project 11 80888626 80889310 - MGP_LPJ_P0030998 Gm9964 protein_coding protein_coding MGP_LPJ_T0032161.1 MGP_LPJ_G0018997.1 mouse_genomes_project 11 102561135 102570823 - MGP_LPJ_P0032161 Krt20 protein_coding protein_coding MGP_LPJ_T0028953.1 MGP_LPJ_G0018207.1 mouse_genomes_project 11 53317091 53318030 + MGP_LPJ_P0028953 Gm9945 protein_coding protein_coding MGP_LPJ_T0031922.1 MGP_LPJ_G0018937.1 mouse_genomes_project 11 100451930 100528648 - MGP_LPJ_P0031922 Srcin1 protein_coding protein_coding MGP_LPJ_T0031923.1 MGP_LPJ_G0018937.1 mouse_genomes_project 11 100456928 100527486 - MGP_LPJ_P0031923 Srcin1 protein_coding protein_coding MGP_LPJ_T0031924.1 MGP_LPJ_G0018937.1 mouse_genomes_project 11 100457002 100527352 - MGP_LPJ_P0031924 Srcin1 protein_coding unknown_likely_coding MGP_LPJ_T0031925.1 MGP_LPJ_G0018937.1 mouse_genomes_project 11 100463546 100527377 - MGP_LPJ_P0031925 Srcin1 protein_coding protein_coding MGP_LPJ_T0031926.1 MGP_LPJ_G0018937.1 mouse_genomes_project 11 100480795 100527362 - MGP_LPJ_P0031926 Srcin1 protein_coding protein_coding MGP_LPJ_T0031927.1 MGP_LPJ_G0018937.1 mouse_genomes_project 11 100501061 100528659 - Srcin1 protein_coding processed_transcript MGP_LPJ_T0032304.1 MGP_LPJ_G0019066.1 mouse_genomes_project 11 104031891 104039319 - Kat2a protein_coding processed_transcript MGP_LPJ_T0032305.1 MGP_LPJ_G0019066.1 mouse_genomes_project 11 104031891 104039595 - Kat2a protein_coding processed_transcript MGP_LPJ_T0032306.1 MGP_LPJ_G0019066.1 mouse_genomes_project 11 104031891 104039611 - MGP_LPJ_P0032306 Kat2a protein_coding protein_coding MGP_LPJ_T0032307.1 MGP_LPJ_G0019066.1 mouse_genomes_project 11 104031891 104039611 - MGP_LPJ_P0032307 Kat2a protein_coding protein_coding MGP_LPJ_T0032518.1 MGP_LPJ_G0019113.1 mouse_genomes_project 11 105211833 105229825 - MGP_LPJ_P0032518 Etv4 protein_coding protein_coding MGP_LPJ_T0032519.1 MGP_LPJ_G0019113.1 mouse_genomes_project 11 105211838 105229886 - MGP_LPJ_P0032519 Etv4 protein_coding protein_coding MGP_LPJ_T0032520.1 MGP_LPJ_G0019113.1 mouse_genomes_project 11 105211838 105229886 - MGP_LPJ_P0032520 Etv4 protein_coding protein_coding MGP_LPJ_T0032521.1 MGP_LPJ_G0019113.1 mouse_genomes_project 11 105212438 105214263 - Etv4 protein_coding processed_transcript MGP_LPJ_T0032522.1 MGP_LPJ_G0019113.1 mouse_genomes_project 11 105215773 105229376 - Etv4 protein_coding processed_transcript MGP_LPJ_T0032523.1 MGP_LPJ_G0019113.1 mouse_genomes_project 11 105215912 105229773 - Etv4 protein_coding processed_transcript MGP_LPJ_T0032524.1 MGP_LPJ_G0019113.1 mouse_genomes_project 11 105215943 105229006 - Etv4 protein_coding processed_transcript MGP_LPJ_T0032525.1 MGP_LPJ_G0019113.1 mouse_genomes_project 11 105216162 105229737 - Etv4 protein_coding processed_transcript MGP_LPJ_T0032526.1 MGP_LPJ_G0019113.1 mouse_genomes_project 11 105216249 105229775 - Etv4 protein_coding processed_transcript MGP_LPJ_T0032527.1 MGP_LPJ_G0019113.1 mouse_genomes_project 11 105216249 105227494 - Etv4 protein_coding processed_transcript MGP_LPJ_T0032528.1 MGP_LPJ_G0019113.1 mouse_genomes_project 11 105216289 105229825 - Etv4 protein_coding processed_transcript MGP_LPJ_T0032529.1 MGP_LPJ_G0019113.1 mouse_genomes_project 11 105227360 105229363 - Etv4 protein_coding processed_transcript MGP_LPJ_T0029992.1 MGP_LPJ_G0018468.1 mouse_genomes_project 11 70935765 70937100 - MGP_LPJ_P0029992 Tmem95 protein_coding protein_coding MGP_LPJ_T0028250.1 MGP_LPJ_G0018013.1 mouse_genomes_project 11 27377438 27410449 + Pnpt1 protein_coding processed_transcript MGP_LPJ_T0028251.1 MGP_LPJ_G0018013.1 mouse_genomes_project 11 27377442 27382393 + Pnpt1 protein_coding processed_transcript MGP_LPJ_T0028252.1 MGP_LPJ_G0018013.1 mouse_genomes_project 11 27377442 27410597 + MGP_LPJ_P0028252 Pnpt1 protein_coding protein_coding MGP_LPJ_T0028253.1 MGP_LPJ_G0018013.1 mouse_genomes_project 11 27385004 27392338 + Pnpt1 protein_coding processed_transcript MGP_LPJ_T0030154.1 MGP_LPJ_G0018496.1 mouse_genomes_project 11 71413098 71420125 - MGP_LPJ_P0030154 Alox12e protein_coding protein_coding MGP_LPJ_T0030155.1 MGP_LPJ_G0018496.1 mouse_genomes_project 11 71417467 71419074 - Alox12e protein_coding retained_intron MGP_LPJ_T0030156.1 MGP_LPJ_G0018496.1 mouse_genomes_project 11 71418490 71419351 - Alox12e protein_coding retained_intron MGP_LPJ_T0030157.1 MGP_LPJ_G0018496.1 mouse_genomes_project 11 71418551 71419945 - Alox12e protein_coding retained_intron MGP_LPJ_T0012577.1 MGP_LPJ_G0010668.1 mouse_genomes_project 11 46087234 46087579 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017202.1 MGP_LPJ_G0015127.1 mouse_genomes_project 11 109067494 109095325 + Gm11638 processed_transcript processed_transcript MGP_LPJ_T0033133.1 MGP_LPJ_G0019238.1 mouse_genomes_project 11 113551079 113595875 - MGP_LPJ_P0033133 Wipi1 protein_coding protein_coding MGP_LPJ_T0033134.1 MGP_LPJ_G0019238.1 mouse_genomes_project 11 113552880 113595875 - MGP_LPJ_P0033134 Wipi1 protein_coding protein_coding MGP_LPJ_T0033135.1 MGP_LPJ_G0019238.1 mouse_genomes_project 11 113560929 113595875 - MGP_LPJ_P0033135 Wipi1 protein_coding protein_coding MGP_LPJ_T0033136.1 MGP_LPJ_G0019238.1 mouse_genomes_project 11 113595681 113596410 - Wipi1 protein_coding processed_transcript MGP_LPJ_T0032038.1 MGP_LPJ_G0018964.1 mouse_genomes_project 11 101459934 101461218 - MGP_LPJ_P0032038 Mien1 protein_coding protein_coding MGP_LPJ_T0031277.1 MGP_LPJ_G0018777.1 mouse_genomes_project 11 86856889 86860767 - MGP_LPJ_P0031277 Pigw protein_coding protein_coding MGP_LPJ_T0031278.1 MGP_LPJ_G0018777.1 mouse_genomes_project 11 86857417 86860857 - MGP_LPJ_P0031278 Pigw protein_coding protein_coding MGP_LPJ_T0031045.1 MGP_LPJ_G0018711.1 mouse_genomes_project 11 81847795 81866454 + MGP_LPJ_P0031045 Rnf135 protein_coding protein_coding MGP_LPJ_T0031046.1 MGP_LPJ_G0018711.1 mouse_genomes_project 11 81848167 81856750 + Rnf135 protein_coding processed_transcript MGP_LPJ_T0028227.1 MGP_LPJ_G0018007.1 mouse_genomes_project 11 24368602 24450257 + MGP_LPJ_P0028227 Fancl protein_coding protein_coding MGP_LPJ_T0028228.1 MGP_LPJ_G0018007.1 mouse_genomes_project 11 24369671 24447507 + Fancl protein_coding processed_transcript MGP_LPJ_T0028229.1 MGP_LPJ_G0018007.1 mouse_genomes_project 11 24369671 24405361 + MGP_LPJ_P0028229 Fancl protein_coding protein_coding MGP_LPJ_T0028230.1 MGP_LPJ_G0018007.1 mouse_genomes_project 11 24369671 24449802 + MGP_LPJ_P0028230 Fancl protein_coding protein_coding MGP_LPJ_T0028231.1 MGP_LPJ_G0018007.1 mouse_genomes_project 11 24446717 24449811 + MGP_LPJ_P0028231 Fancl protein_coding protein_coding MGP_LPJ_T0030550.1 MGP_LPJ_G0018602.1 mouse_genomes_project 11 76143685 76155479 + MGP_LPJ_P0030550 Mnt protein_coding protein_coding MGP_LPJ_T0030551.1 MGP_LPJ_G0018602.1 mouse_genomes_project 11 76148675 76150073 + Mnt protein_coding retained_intron MGP_LPJ_T0030552.1 MGP_LPJ_G0018602.1 mouse_genomes_project 11 76149817 76156149 + MGP_LPJ_P0030552 Mnt protein_coding protein_coding MGP_LPJ_T0032162.1 MGP_LPJ_G0018998.1 mouse_genomes_project 11 102613115 102628213 - MGP_LPJ_P0032162 Krt23 protein_coding protein_coding MGP_LPJ_T0000878.1 MGP_LPJ_G0000807.1 mouse_genomes_project 11 16706452 16707308 - TEC TEC MGP_LPJ_T0029796.1 MGP_LPJ_G0018421.1 mouse_genomes_project 11 70036487 70042503 + MGP_LPJ_P0029796 Aurkb protein_coding protein_coding MGP_LPJ_T0029797.1 MGP_LPJ_G0018421.1 mouse_genomes_project 11 70036492 70042503 + MGP_LPJ_P0029797 Aurkb protein_coding protein_coding MGP_LPJ_T0029798.1 MGP_LPJ_G0018421.1 mouse_genomes_project 11 70036511 70039059 + Aurkb protein_coding processed_transcript MGP_LPJ_T0029799.1 MGP_LPJ_G0018421.1 mouse_genomes_project 11 70036530 70039137 + Aurkb protein_coding retained_intron MGP_LPJ_T0029800.1 MGP_LPJ_G0018421.1 mouse_genomes_project 11 70038817 70039914 + Aurkb protein_coding retained_intron MGP_LPJ_T0029801.1 MGP_LPJ_G0018421.1 mouse_genomes_project 11 70039368 70039916 + Aurkb protein_coding retained_intron MGP_LPJ_T0029802.1 MGP_LPJ_G0018421.1 mouse_genomes_project 11 70039409 70041576 + Aurkb protein_coding retained_intron MGP_LPJ_T0029803.1 MGP_LPJ_G0018421.1 mouse_genomes_project 11 70041401 70041978 + Aurkb protein_coding processed_transcript MGP_LPJ_T0012775.1 MGP_LPJ_G0010866.1 mouse_genomes_project 11 121068417 121068627 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003245.1 MGP_LPJ_G0003005.1 mouse_genomes_project 11 71730482 71732482 - Gm12316 antisense antisense MGP_LPJ_T0100127.1 MGP_LPJ_G0038390.1 mouse_genomes_project 11 10100512 10100642 + Gm22789 snoRNA snoRNA MGP_LPJ_T0012715.1 MGP_LPJ_G0010806.1 mouse_genomes_project 11 98236434 98236610 - processed_pseudogene processed_pseudogene MGP_LPJ_T0031783.1 MGP_LPJ_G0018900.1 mouse_genomes_project 11 98876171 98894587 - MGP_LPJ_P0031783 Ube2z protein_coding protein_coding MGP_LPJ_T0003235.1 MGP_LPJ_G0002997.1 mouse_genomes_project 11 69105598 69109559 - C78197 antisense antisense MGP_LPJ_T0009772.1 MGP_LPJ_G0007890.1 mouse_genomes_project 11 110568053 110568154 - Gm25994 miRNA miRNA MGP_LPJ_T0017188.1 MGP_LPJ_G0015115.1 mouse_genomes_project 11 100551743 100577308 + 2410003L11Rik processed_transcript processed_transcript MGP_LPJ_T0017189.1 MGP_LPJ_G0015115.1 mouse_genomes_project 11 100570210 100574228 + 2410003L11Rik processed_transcript processed_transcript MGP_LPJ_T0017194.1 MGP_LPJ_G0015120.1 mouse_genomes_project 11 101735754 101736249 - Gm12356 processed_transcript processed_transcript MGP_LPJ_T0033405.1 MGP_LPJ_G0019299.1 mouse_genomes_project 11 120041296 120055330 - MGP_LPJ_P0033405 Slc25a19 protein_coding protein_coding MGP_LPJ_T0033406.1 MGP_LPJ_G0019299.1 mouse_genomes_project 11 120042569 120049926 - MGP_LPJ_P0033406 Slc25a19 protein_coding protein_coding MGP_LPJ_T0033407.1 MGP_LPJ_G0019299.1 mouse_genomes_project 11 120043678 120045028 - Slc25a19 protein_coding processed_transcript MGP_LPJ_T0033408.1 MGP_LPJ_G0019299.1 mouse_genomes_project 11 120044784 120055248 - Slc25a19 protein_coding processed_transcript MGP_LPJ_T0033409.1 MGP_LPJ_G0019299.1 mouse_genomes_project 11 120050107 120055247 - Slc25a19 protein_coding processed_transcript MGP_LPJ_T0033410.1 MGP_LPJ_G0019299.1 mouse_genomes_project 11 120050517 120055253 - Slc25a19 protein_coding processed_transcript MGP_LPJ_T0033411.1 MGP_LPJ_G0019299.1 mouse_genomes_project 11 120050979 120055422 - Slc25a19 protein_coding processed_transcript MGP_LPJ_T0033412.1 MGP_LPJ_G0019299.1 mouse_genomes_project 11 120051301 120055253 - MGP_LPJ_P0033412 Slc25a19 protein_coding protein_coding MGP_LPJ_T0033413.1 MGP_LPJ_G0019299.1 mouse_genomes_project 11 120051322 120055089 - MGP_LPJ_P0033413 Slc25a19 protein_coding protein_coding MGP_LPJ_T0033414.1 MGP_LPJ_G0019299.1 mouse_genomes_project 11 120051377 120055271 - MGP_LPJ_P0033414 Slc25a19 protein_coding protein_coding MGP_LPJ_T0003170.1 MGP_LPJ_G0002943.1 mouse_genomes_project 11 45293601 45294707 - Gm16034 antisense antisense MGP_LPJ_T0029147.1 MGP_LPJ_G0018256.1 mouse_genomes_project 11 58412364 58420323 + MGP_LPJ_P0029147 Igtp protein_coding protein_coding MGP_LPJ_T0029148.1 MGP_LPJ_G0018256.1 mouse_genomes_project 11 58412394 58420297 + MGP_LPJ_P0029148 Igtp protein_coding protein_coding MGP_LPJ_T0029149.1 MGP_LPJ_G0018256.1 mouse_genomes_project 11 58412396 58420307 + MGP_LPJ_P0029149 Igtp protein_coding protein_coding MGP_LPJ_T0032213.1 MGP_LPJ_G0019043.1 mouse_genomes_project 11 103418747 103422918 - MGP_LPJ_P0032213 Krt15 protein_coding protein_coding MGP_LPJ_T0032214.1 MGP_LPJ_G0019043.1 mouse_genomes_project 11 103420024 103421388 - Krt15 protein_coding retained_intron MGP_LPJ_T0027885.1 MGP_LPJ_G0017927.1 mouse_genomes_project 11 3384517 3403742 - MGP_LPJ_P0027885 Npc1l1 protein_coding protein_coding MGP_LPJ_T0098480.1 MGP_LPJ_G0036759.1 mouse_genomes_project 11 100465483 100467767 - Gm11611 sense_intronic sense_intronic MGP_LPJ_T0032210.1 MGP_LPJ_G0019042.1 mouse_genomes_project 11 103403560 103408544 - MGP_LPJ_P0032210 Krt13 protein_coding protein_coding MGP_LPJ_T0032211.1 MGP_LPJ_G0019042.1 mouse_genomes_project 11 103404134 103405068 - Krt13 protein_coding retained_intron MGP_LPJ_T0032212.1 MGP_LPJ_G0019042.1 mouse_genomes_project 11 103405378 103406811 - Krt13 protein_coding processed_transcript MGP_LPJ_T0032906.1 MGP_LPJ_G0019188.1 mouse_genomes_project 11 109293500 109486950 + MGP_LPJ_P0032906 Tanc2 protein_coding protein_coding MGP_LPJ_T0032907.1 MGP_LPJ_G0019188.1 mouse_genomes_project 11 109293505 109645307 + MGP_LPJ_P0032907 Tanc2 protein_coding protein_coding MGP_LPJ_T0032908.1 MGP_LPJ_G0019188.1 mouse_genomes_project 11 109293668 109644888 + MGP_LPJ_P0032908 Tanc2 protein_coding protein_coding MGP_LPJ_T0032909.1 MGP_LPJ_G0019188.1 mouse_genomes_project 11 109332431 109418300 + Tanc2 protein_coding processed_transcript MGP_LPJ_T0032910.1 MGP_LPJ_G0019188.1 mouse_genomes_project 11 109416286 109417576 + MGP_LPJ_P0032910 Tanc2 protein_coding protein_coding MGP_LPJ_T0032911.1 MGP_LPJ_G0019188.1 mouse_genomes_project 11 109609711 109640129 + MGP_LPJ_P0032911 Tanc2 protein_coding protein_coding MGP_LPJ_T0032912.1 MGP_LPJ_G0019188.1 mouse_genomes_project 11 109616285 109632228 + Tanc2 protein_coding processed_transcript MGP_LPJ_T0032420.1 MGP_LPJ_G0019092.1 mouse_genomes_project 11 104666135 104667282 - MGP_LPJ_P0032420 Coa3 protein_coding protein_coding MGP_LPJ_T0032421.1 MGP_LPJ_G0019092.1 mouse_genomes_project 11 104666505 104667111 - MGP_LPJ_P0032421 Coa3 protein_coding protein_coding MGP_LPJ_T0031867.1 MGP_LPJ_G0018923.1 mouse_genomes_project 11 99917447 99930837 + MGP_LPJ_P0031867 Sp6 protein_coding protein_coding MGP_LPJ_T0031868.1 MGP_LPJ_G0018923.1 mouse_genomes_project 11 99922605 99930834 + MGP_LPJ_P0031868 Sp6 protein_coding protein_coding MGP_LPJ_T0032308.1 MGP_LPJ_G0019067.1 mouse_genomes_project 11 104040999 104041725 + MGP_LPJ_P0032308 Hspb9 protein_coding protein_coding MGP_LPJ_T0032309.1 MGP_LPJ_G0019067.1 mouse_genomes_project 11 104041071 104041723 + MGP_LPJ_P0032309 Hspb9 protein_coding protein_coding MGP_LPJ_T0012767.1 MGP_LPJ_G0010858.1 mouse_genomes_project 11 119273775 119274230 + processed_pseudogene processed_pseudogene MGP_LPJ_T0032792.1 MGP_LPJ_G0019161.1 mouse_genomes_project 11 106775312 106785618 - MGP_LPJ_P0032792 Spata32 protein_coding protein_coding MGP_LPJ_T0032972.1 MGP_LPJ_G0019206.1 mouse_genomes_project 11 110043863 110047287 - MGP_LPJ_P0032972 Cd79b protein_coding protein_coding MGP_LPJ_T0032973.1 MGP_LPJ_G0019206.1 mouse_genomes_project 11 110043866 110047054 - MGP_LPJ_P0032973 Cd79b protein_coding protein_coding MGP_LPJ_T0006284.1 MGP_LPJ_G0005249.1 mouse_genomes_project 11 71742923 71745458 - Gm12315 lincRNA lincRNA MGP_LPJ_T0009693.1 MGP_LPJ_G0007811.1 mouse_genomes_project 11 53244191 53244262 + Mir6920 miRNA miRNA MGP_LPJ_T0030090.1 MGP_LPJ_G0018484.1 mouse_genomes_project 11 71093005 71126545 + MGP_LPJ_P0030090 Dlg4 protein_coding protein_coding MGP_LPJ_T0030091.1 MGP_LPJ_G0018484.1 mouse_genomes_project 11 71093161 71110449 + MGP_LPJ_P0030091 Dlg4 protein_coding protein_coding MGP_LPJ_T0030092.1 MGP_LPJ_G0018484.1 mouse_genomes_project 11 71093195 71106257 + Dlg4 protein_coding processed_transcript MGP_LPJ_T0030093.1 MGP_LPJ_G0018484.1 mouse_genomes_project 11 71094386 71126545 + MGP_LPJ_P0030093 Dlg4 protein_coding protein_coding MGP_LPJ_T0030094.1 MGP_LPJ_G0018484.1 mouse_genomes_project 11 71094713 71124551 + MGP_LPJ_P0030094 Dlg4 protein_coding protein_coding MGP_LPJ_T0030095.1 MGP_LPJ_G0018484.1 mouse_genomes_project 11 71094849 71110345 + MGP_LPJ_P0030095 Dlg4 protein_coding protein_coding MGP_LPJ_T0030096.1 MGP_LPJ_G0018484.1 mouse_genomes_project 11 71103152 71110327 + MGP_LPJ_P0030096 Dlg4 protein_coding protein_coding MGP_LPJ_T0030097.1 MGP_LPJ_G0018484.1 mouse_genomes_project 11 71106018 71110187 + MGP_LPJ_P0030097 Dlg4 protein_coding protein_coding MGP_LPJ_T0030098.1 MGP_LPJ_G0018484.1 mouse_genomes_project 11 71108937 71118224 + MGP_LPJ_P0030098 Dlg4 protein_coding protein_coding MGP_LPJ_T0030099.1 MGP_LPJ_G0018484.1 mouse_genomes_project 11 71109218 71110106 + MGP_LPJ_P0030099 Dlg4 protein_coding protein_coding MGP_LPJ_T0030100.1 MGP_LPJ_G0018484.1 mouse_genomes_project 11 71109832 71110930 + Dlg4 protein_coding retained_intron MGP_LPJ_T0030101.1 MGP_LPJ_G0018484.1 mouse_genomes_project 11 71119002 71123750 + MGP_LPJ_P0030101 Dlg4 protein_coding nonsense_mediated_decay MGP_LPJ_T0030102.1 MGP_LPJ_G0018484.1 mouse_genomes_project 11 71123327 71123849 + Dlg4 protein_coding retained_intron MGP_LPJ_T0032132.1 MGP_LPJ_G0018985.1 mouse_genomes_project 11 102139218 102152205 + MGP_LPJ_P0032132 Igfbp4 protein_coding protein_coding MGP_LPJ_T0032133.1 MGP_LPJ_G0018985.1 mouse_genomes_project 11 102139734 102149535 + MGP_LPJ_P0032133 Igfbp4 protein_coding protein_coding MGP_LPJ_T0032134.1 MGP_LPJ_G0018985.1 mouse_genomes_project 11 102140160 102146194 + Igfbp4 protein_coding processed_transcript MGP_LPJ_T0032135.1 MGP_LPJ_G0018985.1 mouse_genomes_project 11 102141417 102149754 + Igfbp4 protein_coding processed_transcript MGP_LPJ_T0032136.1 MGP_LPJ_G0018985.1 mouse_genomes_project 11 102142586 102149649 + Igfbp4 protein_coding processed_transcript MGP_LPJ_T0032137.1 MGP_LPJ_G0018985.1 mouse_genomes_project 11 102145129 102149646 + MGP_LPJ_P0032137 Igfbp4 protein_coding protein_coding MGP_LPJ_T0028579.1 MGP_LPJ_G0018095.1 mouse_genomes_project 11 45080907 45089573 - MGP_LPJ_P0028579 Thg1l protein_coding protein_coding MGP_LPJ_T0028580.1 MGP_LPJ_G0018095.1 mouse_genomes_project 11 45080907 45089267 - MGP_LPJ_P0028580 Thg1l protein_coding protein_coding MGP_LPJ_T0028581.1 MGP_LPJ_G0018095.1 mouse_genomes_project 11 45084270 45088495 - Thg1l protein_coding processed_transcript MGP_LPJ_T0028582.1 MGP_LPJ_G0018095.1 mouse_genomes_project 11 45085252 45089236 - Thg1l protein_coding processed_transcript MGP_LPJ_T0028583.1 MGP_LPJ_G0018095.1 mouse_genomes_project 11 45088345 45089562 - Thg1l protein_coding processed_transcript MGP_LPJ_T0003315.1 MGP_LPJ_G0003058.1 mouse_genomes_project 11 103575459 103588012 - Gm14206 antisense antisense MGP_LPJ_T0032153.1 MGP_LPJ_G0018990.1 mouse_genomes_project 11 102400659 102406954 - MGP_LPJ_P0032153 Krt24 protein_coding protein_coding MGP_LPJ_T0031457.1 MGP_LPJ_G0018816.1 mouse_genomes_project 11 89932624 89951940 - MGP_LPJ_P0031457 Lpo protein_coding protein_coding MGP_LPJ_T0031458.1 MGP_LPJ_G0018816.1 mouse_genomes_project 11 89942450 89943389 - Lpo protein_coding retained_intron MGP_LPJ_T0031459.1 MGP_LPJ_G0018816.1 mouse_genomes_project 11 89943617 89953990 - MGP_LPJ_P0031459 Lpo protein_coding protein_coding MGP_LPJ_T0033547.1 MGP_LPJ_G0019321.1 mouse_genomes_project 11 120672472 120692419 + MGP_LPJ_P0033547 Ten1 protein_coding protein_coding MGP_LPJ_T0033548.1 MGP_LPJ_G0019321.1 mouse_genomes_project 11 120672515 120681855 + Ten1 protein_coding retained_intron MGP_LPJ_T0033549.1 MGP_LPJ_G0019321.1 mouse_genomes_project 11 120672576 120692349 + Ten1 protein_coding processed_transcript MGP_LPJ_T0033550.1 MGP_LPJ_G0019321.1 mouse_genomes_project 11 120688033 120692349 + Ten1 protein_coding processed_transcript MGP_LPJ_T0017204.1 MGP_LPJ_G0015129.1 mouse_genomes_project 11 111382610 111402165 - A830035A12Rik processed_transcript processed_transcript MGP_LPJ_T0027951.1 MGP_LPJ_G0017942.1 mouse_genomes_project 11 4316231 4431979 + MGP_LPJ_P0027951 Adcy1 protein_coding protein_coding MGP_LPJ_T0027952.1 MGP_LPJ_G0017942.1 mouse_genomes_project 11 4413355 4426352 + Adcy1 protein_coding processed_transcript MGP_LPJ_T0003295.1 MGP_LPJ_G0003044.1 mouse_genomes_project 11 99185347 99191119 - Gm11536 antisense antisense MGP_LPJ_T0012465.1 MGP_LPJ_G0010556.1 mouse_genomes_project 11 3767937 3769300 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000884.1 MGP_LPJ_G0000813.1 mouse_genomes_project 11 98828577 98829400 - TEC TEC MGP_LPJ_T0032930.1 MGP_LPJ_G0019194.1 mouse_genomes_project 11 109787621 109795170 + MGP_LPJ_P0032930 Taco1 protein_coding protein_coding MGP_LPJ_T0012654.1 MGP_LPJ_G0010745.1 mouse_genomes_project 11 71897736 71898009 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100146.1 MGP_LPJ_G0038409.1 mouse_genomes_project 11 56306963 56307029 - Gm24253 snoRNA snoRNA MGP_LPJ_T0031070.1 MGP_LPJ_G0018716.1 mouse_genomes_project 11 82115320 82121775 + Psmd11 protein_coding retained_intron MGP_LPJ_T0031071.1 MGP_LPJ_G0018716.1 mouse_genomes_project 11 82115328 82161895 + MGP_LPJ_P0031071 Psmd11 protein_coding protein_coding MGP_LPJ_T0031072.1 MGP_LPJ_G0018716.1 mouse_genomes_project 11 82115330 82164275 + MGP_LPJ_P0031072 Psmd11 protein_coding protein_coding MGP_LPJ_T0031073.1 MGP_LPJ_G0018716.1 mouse_genomes_project 11 82115349 82162292 + Psmd11 protein_coding retained_intron MGP_LPJ_T0031074.1 MGP_LPJ_G0018716.1 mouse_genomes_project 11 82115351 82133231 + MGP_LPJ_P0031074 Psmd11 protein_coding nonsense_mediated_decay MGP_LPJ_T0031075.1 MGP_LPJ_G0018716.1 mouse_genomes_project 11 82115370 82148960 + MGP_LPJ_P0031075 Psmd11 protein_coding nonsense_mediated_decay MGP_LPJ_T0031076.1 MGP_LPJ_G0018716.1 mouse_genomes_project 11 82115391 82159694 + MGP_LPJ_P0031076 Psmd11 protein_coding nonsense_mediated_decay MGP_LPJ_T0031077.1 MGP_LPJ_G0018716.1 mouse_genomes_project 11 82115391 82161525 + MGP_LPJ_P0031077 Psmd11 protein_coding nonsense_mediated_decay MGP_LPJ_T0031078.1 MGP_LPJ_G0018716.1 mouse_genomes_project 11 82115391 82144511 + MGP_LPJ_P0031078 Psmd11 protein_coding nonsense_mediated_decay MGP_LPJ_T0031079.1 MGP_LPJ_G0018716.1 mouse_genomes_project 11 82115395 82144692 + MGP_LPJ_P0031079 Psmd11 protein_coding nonsense_mediated_decay MGP_LPJ_T0031080.1 MGP_LPJ_G0018716.1 mouse_genomes_project 11 82116582 82144696 + MGP_LPJ_P0031080 Psmd11 protein_coding protein_coding MGP_LPJ_T0031081.1 MGP_LPJ_G0018716.1 mouse_genomes_project 11 82144636 82161861 + MGP_LPJ_P0031081 Psmd11 protein_coding protein_coding MGP_LPJ_T0031082.1 MGP_LPJ_G0018716.1 mouse_genomes_project 11 82148977 82161700 + MGP_LPJ_P0031082 Psmd11 protein_coding protein_coding MGP_LPJ_T0031083.1 MGP_LPJ_G0018716.1 mouse_genomes_project 11 82150878 82164275 + MGP_LPJ_P0031083 Psmd11 protein_coding protein_coding MGP_LPJ_T0031084.1 MGP_LPJ_G0018716.1 mouse_genomes_project 11 82150882 82161627 + MGP_LPJ_P0031084 Psmd11 protein_coding nonsense_mediated_decay MGP_LPJ_T0006203.1 MGP_LPJ_G0005180.1 mouse_genomes_project 11 18551247 18551686 - Gm12037 lincRNA lincRNA MGP_LPJ_T0098114.1 MGP_LPJ_G0036395.1 mouse_genomes_project 11 21486809 21486926 - Gm23114 rRNA rRNA MGP_LPJ_T0012778.1 MGP_LPJ_G0010869.1 mouse_genomes_project 11 122837587 122838055 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006317.1 MGP_LPJ_G0005273.1 mouse_genomes_project 11 86486074 86496253 + Lhx1os lincRNA lincRNA MGP_LPJ_T0006318.1 MGP_LPJ_G0005273.1 mouse_genomes_project 11 86486083 86496253 + Lhx1os lincRNA lincRNA MGP_LPJ_T0006319.1 MGP_LPJ_G0005273.1 mouse_genomes_project 11 86486098 86496252 + Lhx1os lincRNA lincRNA MGP_LPJ_T0028266.1 MGP_LPJ_G0018016.1 mouse_genomes_project 11 27641118 27775300 + MGP_LPJ_P0028266 Ccdc88a protein_coding protein_coding MGP_LPJ_T0028267.1 MGP_LPJ_G0018016.1 mouse_genomes_project 11 27641237 27691092 + MGP_LPJ_P0028267 Ccdc88a protein_coding protein_coding MGP_LPJ_T0028268.1 MGP_LPJ_G0018016.1 mouse_genomes_project 11 27721495 27726231 + Ccdc88a protein_coding processed_transcript MGP_LPJ_T0028269.1 MGP_LPJ_G0018016.1 mouse_genomes_project 11 27728890 27747369 + MGP_LPJ_P0028269 Ccdc88a protein_coding protein_coding MGP_LPJ_T0028270.1 MGP_LPJ_G0018016.1 mouse_genomes_project 11 27735356 27768612 + MGP_LPJ_P0028270 Ccdc88a protein_coding protein_coding MGP_LPJ_T0028271.1 MGP_LPJ_G0018016.1 mouse_genomes_project 11 27750595 27768024 + MGP_LPJ_P0028271 Ccdc88a protein_coding protein_coding MGP_LPJ_T0028272.1 MGP_LPJ_G0018016.1 mouse_genomes_project 11 27758559 27762490 + Ccdc88a protein_coding processed_transcript MGP_LPJ_T0028856.1 MGP_LPJ_G0018178.1 mouse_genomes_project 11 51272433 51279173 - MGP_LPJ_P0028856 Hnrnpab protein_coding protein_coding MGP_LPJ_T0028857.1 MGP_LPJ_G0018178.1 mouse_genomes_project 11 51273202 51279173 - MGP_LPJ_P0028857 Hnrnpab protein_coding protein_coding MGP_LPJ_T0028858.1 MGP_LPJ_G0018178.1 mouse_genomes_project 11 51273507 51279173 - MGP_LPJ_P0028858 Hnrnpab protein_coding protein_coding MGP_LPJ_T0030130.1 MGP_LPJ_G0018490.1 mouse_genomes_project 11 71307009 71311233 - MGP_LPJ_P0030130 Slc16a13 protein_coding protein_coding MGP_LPJ_T0030131.1 MGP_LPJ_G0018490.1 mouse_genomes_project 11 71308958 71311047 - MGP_LPJ_P0030131 Slc16a13 protein_coding protein_coding MGP_LPJ_T0030132.1 MGP_LPJ_G0018490.1 mouse_genomes_project 11 71309396 71311303 - MGP_LPJ_P0030132 Slc16a13 protein_coding protein_coding MGP_LPJ_T0030133.1 MGP_LPJ_G0018490.1 mouse_genomes_project 11 71309509 71311023 - MGP_LPJ_P0030133 Slc16a13 protein_coding protein_coding MGP_LPJ_T0029604.1 MGP_LPJ_G0018372.1 mouse_genomes_project 11 63464635 63498695 + MGP_LPJ_P0029604 Fbxw10 protein_coding protein_coding MGP_LPJ_T0029605.1 MGP_LPJ_G0018372.1 mouse_genomes_project 11 63464689 63498692 + MGP_LPJ_P0029605 Fbxw10 protein_coding nonsense_mediated_decay MGP_LPJ_T0029606.1 MGP_LPJ_G0018372.1 mouse_genomes_project 11 63464689 63498692 + MGP_LPJ_P0029606 Fbxw10 protein_coding protein_coding MGP_LPJ_T0029607.1 MGP_LPJ_G0018372.1 mouse_genomes_project 11 63464694 63469916 + Fbxw10 protein_coding retained_intron MGP_LPJ_T0029608.1 MGP_LPJ_G0018372.1 mouse_genomes_project 11 63464698 63498673 + MGP_LPJ_P0029608 Fbxw10 protein_coding protein_coding MGP_LPJ_T0029609.1 MGP_LPJ_G0018372.1 mouse_genomes_project 11 63496103 63497983 + Fbxw10 protein_coding processed_transcript MGP_LPJ_T0003215.1 MGP_LPJ_G0002982.1 mouse_genomes_project 11 63161944 63163845 - Gm12280 antisense antisense MGP_LPJ_T0030008.1 MGP_LPJ_G0018472.1 mouse_genomes_project 11 70968606 70973105 + Neurl4 protein_coding processed_transcript MGP_LPJ_T0030009.1 MGP_LPJ_G0018472.1 mouse_genomes_project 11 70969349 70983215 + MGP_LPJ_P0030009 Neurl4 protein_coding protein_coding MGP_LPJ_T0030010.1 MGP_LPJ_G0018472.1 mouse_genomes_project 11 70969349 70983215 + MGP_LPJ_P0030010 Neurl4 protein_coding protein_coding MGP_LPJ_T0030011.1 MGP_LPJ_G0018472.1 mouse_genomes_project 11 70969349 70983215 + MGP_LPJ_P0030011 Neurl4 protein_coding protein_coding MGP_LPJ_T0030012.1 MGP_LPJ_G0018472.1 mouse_genomes_project 11 70969424 70983520 + MGP_LPJ_P0030012 Neurl4 protein_coding protein_coding MGP_LPJ_T0030013.1 MGP_LPJ_G0018472.1 mouse_genomes_project 11 70971720 70975302 + Neurl4 protein_coding retained_intron MGP_LPJ_T0030014.1 MGP_LPJ_G0018472.1 mouse_genomes_project 11 70971849 70973620 + Neurl4 protein_coding processed_transcript MGP_LPJ_T0030015.1 MGP_LPJ_G0018472.1 mouse_genomes_project 11 70973097 70983031 + MGP_LPJ_P0030015 Neurl4 protein_coding nonsense_mediated_decay MGP_LPJ_T0030016.1 MGP_LPJ_G0018472.1 mouse_genomes_project 11 70973740 70978440 + MGP_LPJ_P0030016 Neurl4 protein_coding nonsense_mediated_decay MGP_LPJ_T0030017.1 MGP_LPJ_G0018472.1 mouse_genomes_project 11 70976968 70978226 + Neurl4 protein_coding retained_intron MGP_LPJ_T0030018.1 MGP_LPJ_G0018472.1 mouse_genomes_project 11 70978339 70980026 + Neurl4 protein_coding retained_intron MGP_LPJ_T0030019.1 MGP_LPJ_G0018472.1 mouse_genomes_project 11 70978680 70980567 + Neurl4 protein_coding retained_intron MGP_LPJ_T0030020.1 MGP_LPJ_G0018472.1 mouse_genomes_project 11 70980737 70982852 + MGP_LPJ_P0030020 Neurl4 protein_coding protein_coding MGP_LPJ_T0032058.1 MGP_LPJ_G0018970.1 mouse_genomes_project 11 101697141 101710061 + MGP_LPJ_P0032058 Gsdma2 protein_coding protein_coding MGP_LPJ_T0032059.1 MGP_LPJ_G0018970.1 mouse_genomes_project 11 101697145 101700232 + Gsdma2 protein_coding processed_transcript MGP_LPJ_T0032060.1 MGP_LPJ_G0018970.1 mouse_genomes_project 11 101697145 101710049 + MGP_LPJ_P0032060 Gsdma2 protein_coding protein_coding MGP_LPJ_T0032061.1 MGP_LPJ_G0018970.1 mouse_genomes_project 11 101697151 101717979 + Gsdma2 protein_coding processed_transcript MGP_LPJ_T0032062.1 MGP_LPJ_G0018970.1 mouse_genomes_project 11 101697157 101699804 + Gsdma2 protein_coding processed_transcript MGP_LPJ_T0032063.1 MGP_LPJ_G0018970.1 mouse_genomes_project 11 101700767 101702169 + Gsdma2 protein_coding processed_transcript MGP_LPJ_T0032064.1 MGP_LPJ_G0018970.1 mouse_genomes_project 11 101701629 101704955 + Gsdma2 protein_coding processed_transcript MGP_LPJ_T0003236.1 MGP_LPJ_G0002998.1 mouse_genomes_project 11 69510288 69513998 - Ccdc42os antisense antisense MGP_LPJ_T0030481.1 MGP_LPJ_G0018571.1 mouse_genomes_project 11 74729823 74730762 - MGP_LPJ_P0030481 Olfr382 protein_coding protein_coding MGP_LPJ_T0033741.1 MGP_LPJ_G0019360.1 mouse_genomes_project 11 122478597 122484129 - Tha1 protein_coding processed_transcript MGP_LPJ_T0033742.1 MGP_LPJ_G0019360.1 mouse_genomes_project 11 122478597 122484107 - MGP_LPJ_P0033742 Tha1 protein_coding protein_coding MGP_LPJ_T0033743.1 MGP_LPJ_G0019360.1 mouse_genomes_project 11 122480371 122482560 - Tha1 protein_coding processed_transcript MGP_LPJ_T0028926.1 MGP_LPJ_G0018198.1 mouse_genomes_project 11 53140552 53149163 + MGP_LPJ_P0028926 Zcchc10 protein_coding protein_coding MGP_LPJ_T0028927.1 MGP_LPJ_G0018198.1 mouse_genomes_project 11 53143273 53148341 + MGP_LPJ_P0028927 Zcchc10 protein_coding nonsense_mediated_decay MGP_LPJ_T0012707.1 MGP_LPJ_G0010798.1 mouse_genomes_project 11 92888319 92895669 - processed_pseudogene processed_pseudogene MGP_LPJ_T0033764.1 MGP_LPJ_G0019365.1 mouse_genomes_project 11 122893388 122899789 - Usp36 protein_coding retained_intron MGP_LPJ_T0033765.1 MGP_LPJ_G0019365.1 mouse_genomes_project 11 122893389 122923969 - MGP_LPJ_P0033765 Usp36 protein_coding protein_coding MGP_LPJ_T0033766.1 MGP_LPJ_G0019365.1 mouse_genomes_project 11 122894606 122897026 - Usp36 protein_coding retained_intron MGP_LPJ_T0033767.1 MGP_LPJ_G0019365.1 mouse_genomes_project 11 122917660 122923942 - Usp36 protein_coding retained_intron MGP_LPJ_T0031207.1 MGP_LPJ_G0018762.1 mouse_genomes_project 11 85625432 85627766 + MGP_LPJ_P0031207 Wfdc18 protein_coding protein_coding MGP_LPJ_T0031208.1 MGP_LPJ_G0018762.1 mouse_genomes_project 11 85625540 85627757 + MGP_LPJ_P0031208 Wfdc18 protein_coding nonsense_mediated_decay MGP_LPJ_T0031209.1 MGP_LPJ_G0018762.1 mouse_genomes_project 11 85625542 85627116 + Wfdc18 protein_coding retained_intron MGP_LPJ_T0006211.1 MGP_LPJ_G0005188.1 mouse_genomes_project 11 21965367 21966176 + Gm12063 lincRNA lincRNA MGP_LPJ_T0030329.1 MGP_LPJ_G0018528.1 mouse_genomes_project 11 72182373 72187939 + MGP_LPJ_P0030329 Mis12 protein_coding protein_coding MGP_LPJ_T0030330.1 MGP_LPJ_G0018528.1 mouse_genomes_project 11 72182373 72190132 + MGP_LPJ_P0030330 Mis12 protein_coding protein_coding MGP_LPJ_T0030331.1 MGP_LPJ_G0018528.1 mouse_genomes_project 11 72182373 72188827 + MGP_LPJ_P0030331 Mis12 protein_coding protein_coding MGP_LPJ_T0030332.1 MGP_LPJ_G0018528.1 mouse_genomes_project 11 72182621 72187928 + MGP_LPJ_P0030332 Mis12 protein_coding protein_coding MGP_LPJ_T0030333.1 MGP_LPJ_G0018528.1 mouse_genomes_project 11 72182624 72187919 + MGP_LPJ_P0030333 Mis12 protein_coding protein_coding MGP_LPJ_T0030334.1 MGP_LPJ_G0018528.1 mouse_genomes_project 11 72182653 72187956 + MGP_LPJ_P0030334 Mis12 protein_coding protein_coding MGP_LPJ_T0029187.1 MGP_LPJ_G0018273.1 mouse_genomes_project 11 58896765 58905955 - MGP_LPJ_P0029187 2210407C18Rik protein_coding protein_coding MGP_LPJ_T0029188.1 MGP_LPJ_G0018273.1 mouse_genomes_project 11 58896770 58903376 - MGP_LPJ_P0029188 2210407C18Rik protein_coding protein_coding MGP_LPJ_T0029189.1 MGP_LPJ_G0018273.1 mouse_genomes_project 11 58902181 58903369 - 2210407C18Rik protein_coding processed_transcript MGP_LPJ_T0033807.1 MGP_LPJ_G0019374.1 mouse_genomes_project 11 123691850 123700182 + MGP_LPJ_P0033807 Cbx2 protein_coding protein_coding MGP_LPJ_T0033808.1 MGP_LPJ_G0019374.1 mouse_genomes_project 11 123692613 123696950 + Cbx2 protein_coding processed_transcript MGP_LPJ_T0003347.1 MGP_LPJ_G0003088.1 mouse_genomes_project 11 112434525 112439095 - Cep112os1 antisense antisense MGP_LPJ_T0029253.1 MGP_LPJ_G0018304.1 mouse_genomes_project 11 59733263 59759594 + MGP_LPJ_P0029253 Wnt9a protein_coding protein_coding MGP_LPJ_T0029254.1 MGP_LPJ_G0018304.1 mouse_genomes_project 11 59733265 59759594 + MGP_LPJ_P0029254 Wnt9a protein_coding protein_coding MGP_LPJ_T0029972.1 MGP_LPJ_G0018462.1 mouse_genomes_project 11 70860983 70862883 - MGP_LPJ_P0029972 4933402P03Rik protein_coding protein_coding MGP_LPJ_T0003184.1 MGP_LPJ_G0002956.1 mouse_genomes_project 11 53585350 53586016 - Gm12214 antisense antisense MGP_LPJ_T0009740.1 MGP_LPJ_G0007858.1 mouse_genomes_project 11 88639691 88639783 - Mir21a miRNA miRNA MGP_LPJ_T0030239.1 MGP_LPJ_G0018514.1 mouse_genomes_project 11 71775676 71778468 - MGP_LPJ_P0030239 Pfn1 protein_coding protein_coding MGP_LPJ_T0030240.1 MGP_LPJ_G0018514.1 mouse_genomes_project 11 71775762 71778445 - MGP_LPJ_P0030240 Pfn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0030241.1 MGP_LPJ_G0018514.1 mouse_genomes_project 11 71776435 71778432 - Pfn1 protein_coding retained_intron MGP_LPJ_T0030242.1 MGP_LPJ_G0018514.1 mouse_genomes_project 11 71776445 71778422 - MGP_LPJ_P0030242 Pfn1 protein_coding protein_coding MGP_LPJ_T0031993.1 MGP_LPJ_G0018953.1 mouse_genomes_project 11 101021028 101040534 - MGP_LPJ_P0031993 Stac2 protein_coding protein_coding MGP_LPJ_T0031994.1 MGP_LPJ_G0018953.1 mouse_genomes_project 11 101024497 101027897 - MGP_LPJ_P0031994 Stac2 protein_coding protein_coding MGP_LPJ_T0012695.1 MGP_LPJ_G0010786.1 mouse_genomes_project 11 87097022 87099362 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003368.1 MGP_LPJ_G0003104.1 mouse_genomes_project 11 122387979 122389709 - Gm11723 antisense antisense MGP_LPJ_T0006238.1 MGP_LPJ_G0005209.1 mouse_genomes_project 11 33485421 33487614 + Gm12711 lincRNA lincRNA MGP_LPJ_T0031380.1 MGP_LPJ_G0018798.1 mouse_genomes_project 11 88834195 88873624 - MGP_LPJ_P0031380 Dhx40 protein_coding protein_coding MGP_LPJ_T0031381.1 MGP_LPJ_G0018798.1 mouse_genomes_project 11 88840674 88866929 - MGP_LPJ_P0031381 Dhx40 protein_coding protein_coding MGP_LPJ_T0031382.1 MGP_LPJ_G0018798.1 mouse_genomes_project 11 88849943 88854552 - Dhx40 protein_coding processed_transcript MGP_LPJ_T0031383.1 MGP_LPJ_G0018798.1 mouse_genomes_project 11 88865669 88872917 - Dhx40 protein_coding processed_transcript MGP_LPJ_T0027770.1 MGP_LPJ_G0017903.1 mouse_genomes_project 11 2081073 2138727 + MGP_LPJ_P0027770 Ap1b1 protein_coding protein_coding MGP_LPJ_T0027771.1 MGP_LPJ_G0017903.1 mouse_genomes_project 11 2081073 2138665 + MGP_LPJ_P0027771 Ap1b1 protein_coding protein_coding MGP_LPJ_T0027772.1 MGP_LPJ_G0017903.1 mouse_genomes_project 11 2081161 2110706 + Ap1b1 protein_coding processed_transcript MGP_LPJ_T0027773.1 MGP_LPJ_G0017903.1 mouse_genomes_project 11 2081183 2111819 + Ap1b1 protein_coding processed_transcript MGP_LPJ_T0027774.1 MGP_LPJ_G0017903.1 mouse_genomes_project 11 2104987 2110706 + Ap1b1 protein_coding processed_transcript MGP_LPJ_T0027775.1 MGP_LPJ_G0017903.1 mouse_genomes_project 11 2105043 2138665 + MGP_LPJ_P0027775 Ap1b1 protein_coding protein_coding MGP_LPJ_T0027776.1 MGP_LPJ_G0017903.1 mouse_genomes_project 11 2126933 2128748 + Ap1b1 protein_coding processed_transcript MGP_LPJ_T0027777.1 MGP_LPJ_G0017903.1 mouse_genomes_project 11 2133296 2136338 + Ap1b1 protein_coding processed_transcript MGP_LPJ_T0027778.1 MGP_LPJ_G0017903.1 mouse_genomes_project 11 2134691 2136357 + Ap1b1 protein_coding processed_transcript MGP_LPJ_T0030544.1 MGP_LPJ_G0018601.1 mouse_genomes_project 11 76081112 76130269 + MGP_LPJ_P0030544 Mettl16 protein_coding protein_coding MGP_LPJ_T0030545.1 MGP_LPJ_G0018601.1 mouse_genomes_project 11 76081112 76140882 + MGP_LPJ_P0030545 Mettl16 protein_coding protein_coding MGP_LPJ_T0030546.1 MGP_LPJ_G0018601.1 mouse_genomes_project 11 76081198 76083904 + MGP_LPJ_P0030546 Mettl16 protein_coding protein_coding MGP_LPJ_T0030547.1 MGP_LPJ_G0018601.1 mouse_genomes_project 11 76081207 76130269 + MGP_LPJ_P0030547 Mettl16 protein_coding nonsense_mediated_decay MGP_LPJ_T0030548.1 MGP_LPJ_G0018601.1 mouse_genomes_project 11 76113801 76129321 + Mettl16 protein_coding retained_intron MGP_LPJ_T0030549.1 MGP_LPJ_G0018601.1 mouse_genomes_project 11 76119051 76129886 + Mettl16 protein_coding processed_transcript MGP_LPJ_T0027913.1 MGP_LPJ_G0017934.1 mouse_genomes_project 11 3662131 3670450 - MGP_LPJ_P0027913 Purb protein_coding protein_coding MGP_LPJ_T0032359.1 MGP_LPJ_G0019079.1 mouse_genomes_project 11 104442155 104447300 + MGP_LPJ_P0032359 Coasy protein_coding protein_coding MGP_LPJ_T0032360.1 MGP_LPJ_G0019079.1 mouse_genomes_project 11 104442208 104446301 + Coasy protein_coding processed_transcript MGP_LPJ_T0032361.1 MGP_LPJ_G0019079.1 mouse_genomes_project 11 104442215 104447300 + MGP_LPJ_P0032361 Coasy protein_coding protein_coding MGP_LPJ_T0032362.1 MGP_LPJ_G0019079.1 mouse_genomes_project 11 104443485 104444770 + Coasy protein_coding processed_transcript MGP_LPJ_T0031255.1 MGP_LPJ_G0018773.1 mouse_genomes_project 11 86478717 86485950 - MGP_LPJ_P0031255 Lhx1 protein_coding protein_coding MGP_LPJ_T0031256.1 MGP_LPJ_G0018773.1 mouse_genomes_project 11 86479867 86482746 - MGP_LPJ_P0031256 Lhx1 protein_coding protein_coding MGP_LPJ_T0031257.1 MGP_LPJ_G0018773.1 mouse_genomes_project 11 86480132 86482482 - Lhx1 protein_coding retained_intron MGP_LPJ_T0031258.1 MGP_LPJ_G0018773.1 mouse_genomes_project 11 86482310 86483127 - MGP_LPJ_P0031258 Lhx1 protein_coding protein_coding MGP_LPJ_T0028944.1 MGP_LPJ_G0018203.1 mouse_genomes_project 11 53291407 53294007 - MGP_LPJ_P0028944 Gm10447 protein_coding protein_coding MGP_LPJ_T0030214.1 MGP_LPJ_G0018509.1 mouse_genomes_project 11 71733613 71737925 - MGP_LPJ_P0030214 Chrne protein_coding protein_coding MGP_LPJ_T0030215.1 MGP_LPJ_G0018509.1 mouse_genomes_project 11 71733613 71737947 - MGP_LPJ_P0030215 Chrne protein_coding protein_coding MGP_LPJ_T0030216.1 MGP_LPJ_G0018509.1 mouse_genomes_project 11 71733615 71734404 - Chrne protein_coding retained_intron MGP_LPJ_T0030217.1 MGP_LPJ_G0018509.1 mouse_genomes_project 11 71733623 71734428 - Chrne protein_coding retained_intron MGP_LPJ_T0027697.1 MGP_LPJ_G0017885.1 mouse_genomes_project 11 1171749 1177720 + MGP_LPJ_P0027697 Rnf215 protein_coding protein_coding MGP_LPJ_T0027698.1 MGP_LPJ_G0017885.1 mouse_genomes_project 11 1171761 1173916 + MGP_LPJ_P0027698 Rnf215 protein_coding protein_coding MGP_LPJ_T0027699.1 MGP_LPJ_G0017885.1 mouse_genomes_project 11 1171829 1173765 + MGP_LPJ_P0027699 Rnf215 protein_coding protein_coding MGP_LPJ_T0027700.1 MGP_LPJ_G0017885.1 mouse_genomes_project 11 1172049 1173703 + Rnf215 protein_coding processed_transcript MGP_LPJ_T0030357.1 MGP_LPJ_G0018535.1 mouse_genomes_project 11 73279956 73281331 - 4933427D14Rik protein_coding processed_transcript MGP_LPJ_T0030358.1 MGP_LPJ_G0018535.1 mouse_genomes_project 11 73279956 73333199 - MGP_LPJ_P0030358 4933427D14Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0030359.1 MGP_LPJ_G0018535.1 mouse_genomes_project 11 73279957 73333007 - MGP_LPJ_P0030359 4933427D14Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0030360.1 MGP_LPJ_G0018535.1 mouse_genomes_project 11 73280124 73329510 - MGP_LPJ_P0030360 4933427D14Rik protein_coding protein_coding MGP_LPJ_T0030361.1 MGP_LPJ_G0018535.1 mouse_genomes_project 11 73281420 73301514 - 4933427D14Rik protein_coding processed_transcript MGP_LPJ_T0030362.1 MGP_LPJ_G0018535.1 mouse_genomes_project 11 73321182 73333171 - MGP_LPJ_P0030362 4933427D14Rik protein_coding protein_coding MGP_LPJ_T0030363.1 MGP_LPJ_G0018535.1 mouse_genomes_project 11 73324179 73332960 - 4933427D14Rik protein_coding processed_transcript MGP_LPJ_T0030364.1 MGP_LPJ_G0018535.1 mouse_genomes_project 11 73324426 73328348 - 4933427D14Rik protein_coding processed_transcript MGP_LPJ_T0012485.1 MGP_LPJ_G0010576.1 mouse_genomes_project 11 13000321 13010795 + processed_pseudogene processed_pseudogene MGP_LPJ_T0032665.1 MGP_LPJ_G0019136.1 mouse_genomes_project 11 105928305 105934819 + MGP_LPJ_P0032665 Grn protein_coding protein_coding MGP_LPJ_T0032666.1 MGP_LPJ_G0019136.1 mouse_genomes_project 11 105928508 105932454 + MGP_LPJ_P0032666 Grn protein_coding protein_coding MGP_LPJ_T0032667.1 MGP_LPJ_G0019136.1 mouse_genomes_project 11 105930792 105932265 + Grn protein_coding retained_intron MGP_LPJ_T0032668.1 MGP_LPJ_G0019136.1 mouse_genomes_project 11 105931939 105932603 + Grn protein_coding retained_intron MGP_LPJ_T0032669.1 MGP_LPJ_G0019136.1 mouse_genomes_project 11 105932106 105933272 + Grn protein_coding retained_intron MGP_LPJ_T0032670.1 MGP_LPJ_G0019136.1 mouse_genomes_project 11 105932109 105932901 + Grn protein_coding retained_intron MGP_LPJ_T0032671.1 MGP_LPJ_G0019136.1 mouse_genomes_project 11 105932727 105933954 + Grn protein_coding retained_intron MGP_LPJ_T0032672.1 MGP_LPJ_G0019136.1 mouse_genomes_project 11 105933294 105934583 + MGP_LPJ_P0032672 Grn protein_coding protein_coding MGP_LPJ_T0032673.1 MGP_LPJ_G0019136.1 mouse_genomes_project 11 105933315 105934074 + Grn protein_coding retained_intron MGP_LPJ_T0032674.1 MGP_LPJ_G0019136.1 mouse_genomes_project 11 105933425 105935051 + MGP_LPJ_P0032674 Grn protein_coding protein_coding MGP_LPJ_T0032143.1 MGP_LPJ_G0018988.1 mouse_genomes_project 11 102330103 102351155 - MGP_LPJ_P0032143 Smarce1 protein_coding unknown_likely_coding MGP_LPJ_T0032144.1 MGP_LPJ_G0018988.1 mouse_genomes_project 11 102330111 102351710 - MGP_LPJ_P0032144 Smarce1 protein_coding protein_coding MGP_LPJ_T0032145.1 MGP_LPJ_G0018988.1 mouse_genomes_project 11 102331059 102334118 - Smarce1 protein_coding processed_transcript MGP_LPJ_T0032146.1 MGP_LPJ_G0018988.1 mouse_genomes_project 11 102339895 102341508 - Smarce1 protein_coding processed_transcript MGP_LPJ_T0032147.1 MGP_LPJ_G0018988.1 mouse_genomes_project 11 102340304 102351138 - Smarce1 protein_coding processed_transcript MGP_LPJ_T0032148.1 MGP_LPJ_G0018988.1 mouse_genomes_project 11 102340384 102351106 - Smarce1 protein_coding processed_transcript MGP_LPJ_T0032149.1 MGP_LPJ_G0018988.1 mouse_genomes_project 11 102345984 102351139 - Smarce1 protein_coding processed_transcript MGP_LPJ_T0030385.1 MGP_LPJ_G0018544.1 mouse_genomes_project 11 73569882 73572430 + MGP_LPJ_P0030385 Ggt6 protein_coding protein_coding MGP_LPJ_T0030386.1 MGP_LPJ_G0018544.1 mouse_genomes_project 11 73569887 73572428 + MGP_LPJ_P0030386 Ggt6 protein_coding protein_coding MGP_LPJ_T0028178.1 MGP_LPJ_G0017997.1 mouse_genomes_project 11 21345329 21354319 - MGP_LPJ_P0028178 Ahsa2 protein_coding protein_coding MGP_LPJ_T0028179.1 MGP_LPJ_G0017997.1 mouse_genomes_project 11 21346363 21349087 - Ahsa2 protein_coding processed_transcript MGP_LPJ_T0028180.1 MGP_LPJ_G0017997.1 mouse_genomes_project 11 21347101 21348205 - Ahsa2 protein_coding processed_transcript MGP_LPJ_T0028181.1 MGP_LPJ_G0017997.1 mouse_genomes_project 11 21347178 21354635 - MGP_LPJ_P0028181 Ahsa2 protein_coding protein_coding MGP_LPJ_T0028182.1 MGP_LPJ_G0017997.1 mouse_genomes_project 11 21347207 21347858 - Ahsa2 protein_coding processed_transcript MGP_LPJ_T0028183.1 MGP_LPJ_G0017997.1 mouse_genomes_project 11 21347889 21354686 - MGP_LPJ_P0028183 Ahsa2 protein_coding protein_coding MGP_LPJ_T0028184.1 MGP_LPJ_G0017997.1 mouse_genomes_project 11 21349934 21354676 - MGP_LPJ_P0028184 Ahsa2 protein_coding protein_coding MGP_LPJ_T0012601.1 MGP_LPJ_G0010692.1 mouse_genomes_project 11 53871248 53871691 - processed_pseudogene processed_pseudogene MGP_LPJ_T0031279.1 MGP_LPJ_G0018778.1 mouse_genomes_project 11 86860719 86892132 + MGP_LPJ_P0031279 Myo19 protein_coding protein_coding MGP_LPJ_T0031280.1 MGP_LPJ_G0018778.1 mouse_genomes_project 11 86860741 86863563 + Myo19 protein_coding processed_transcript MGP_LPJ_T0031281.1 MGP_LPJ_G0018778.1 mouse_genomes_project 11 86860791 86892028 + Myo19 protein_coding processed_transcript MGP_LPJ_T0031282.1 MGP_LPJ_G0018778.1 mouse_genomes_project 11 86860881 86861575 + Myo19 protein_coding processed_transcript MGP_LPJ_T0031283.1 MGP_LPJ_G0018778.1 mouse_genomes_project 11 86860924 86892037 + Myo19 protein_coding processed_transcript MGP_LPJ_T0031284.1 MGP_LPJ_G0018778.1 mouse_genomes_project 11 86860938 86874388 + MGP_LPJ_P0031284 Myo19 protein_coding protein_coding MGP_LPJ_T0031285.1 MGP_LPJ_G0018778.1 mouse_genomes_project 11 86863157 86892028 + Myo19 protein_coding processed_transcript MGP_LPJ_T0003306.1 MGP_LPJ_G0003054.1 mouse_genomes_project 11 101863143 101876750 - Gm12359 antisense antisense MGP_LPJ_T0003307.1 MGP_LPJ_G0003054.1 mouse_genomes_project 11 101863744 101876750 - Gm12359 antisense antisense MGP_LPJ_T0003308.1 MGP_LPJ_G0003054.1 mouse_genomes_project 11 101870091 101876721 - Gm12359 antisense antisense MGP_LPJ_T0029205.1 MGP_LPJ_G0018285.1 mouse_genomes_project 11 59194293 59195751 + MGP_LPJ_P0029205 protein_coding protein_coding MGP_LPJ_T0012518.1 MGP_LPJ_G0010609.1 mouse_genomes_project 11 20443414 20443704 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017089.1 MGP_LPJ_G0015063.1 mouse_genomes_project 11 506235 506905 + Gm11947 processed_transcript processed_transcript MGP_LPJ_T0011323.1 MGP_LPJ_G0009441.1 mouse_genomes_project 11 87295945 87296241 - Gm22587 misc_RNA misc_RNA MGP_LPJ_T0031813.1 MGP_LPJ_G0018914.1 mouse_genomes_project 11 99318853 99626028 + MGP_LPJ_P0031813 Skap1 protein_coding protein_coding MGP_LPJ_T0031814.1 MGP_LPJ_G0018914.1 mouse_genomes_project 11 99318853 99626217 + MGP_LPJ_P0031814 Skap1 protein_coding protein_coding MGP_LPJ_T0031815.1 MGP_LPJ_G0018914.1 mouse_genomes_project 11 99318860 99347891 + MGP_LPJ_P0031815 Skap1 protein_coding protein_coding MGP_LPJ_T0031816.1 MGP_LPJ_G0018914.1 mouse_genomes_project 11 99318884 99597160 + Skap1 protein_coding retained_intron MGP_LPJ_T0031817.1 MGP_LPJ_G0018914.1 mouse_genomes_project 11 99318887 99626028 + MGP_LPJ_P0031817 Skap1 protein_coding protein_coding MGP_LPJ_T0031818.1 MGP_LPJ_G0018914.1 mouse_genomes_project 11 99318893 99440109 + MGP_LPJ_P0031818 Skap1 protein_coding protein_coding MGP_LPJ_T0031819.1 MGP_LPJ_G0018914.1 mouse_genomes_project 11 99318941 99540059 + MGP_LPJ_P0031819 Skap1 protein_coding protein_coding MGP_LPJ_T0031820.1 MGP_LPJ_G0018914.1 mouse_genomes_project 11 99338017 99347891 + Skap1 protein_coding processed_transcript MGP_LPJ_T0031821.1 MGP_LPJ_G0018914.1 mouse_genomes_project 11 99344079 99569204 + Skap1 protein_coding retained_intron MGP_LPJ_T0031822.1 MGP_LPJ_G0018914.1 mouse_genomes_project 11 99573007 99578002 + Skap1 protein_coding retained_intron MGP_LPJ_T0032197.1 MGP_LPJ_G0019031.1 mouse_genomes_project 11 103163845 103184281 + MGP_LPJ_P0032197 Krtap31-2 protein_coding protein_coding MGP_LPJ_T0029004.1 MGP_LPJ_G0018220.1 mouse_genomes_project 11 53964189 53978197 - MGP_LPJ_P0029004 Pdlim4 protein_coding protein_coding MGP_LPJ_T0029005.1 MGP_LPJ_G0018220.1 mouse_genomes_project 11 53965182 53974059 - MGP_LPJ_P0029005 Pdlim4 protein_coding protein_coding MGP_LPJ_T0029006.1 MGP_LPJ_G0018220.1 mouse_genomes_project 11 53968213 53978256 - Pdlim4 protein_coding retained_intron MGP_LPJ_T0029007.1 MGP_LPJ_G0018220.1 mouse_genomes_project 11 53972985 53973831 - Pdlim4 protein_coding processed_transcript MGP_LPJ_T0033732.1 MGP_LPJ_G0019357.1 mouse_genomes_project 11 122433002 122448032 + MGP_LPJ_P0033732 Afmid protein_coding protein_coding MGP_LPJ_T0033733.1 MGP_LPJ_G0019357.1 mouse_genomes_project 11 122433052 122444090 + MGP_LPJ_P0033733 Afmid protein_coding protein_coding MGP_LPJ_T0033734.1 MGP_LPJ_G0019357.1 mouse_genomes_project 11 122433059 122439725 + Afmid protein_coding retained_intron MGP_LPJ_T0033735.1 MGP_LPJ_G0019357.1 mouse_genomes_project 11 122439178 122442273 + Afmid protein_coding retained_intron MGP_LPJ_T0033736.1 MGP_LPJ_G0019357.1 mouse_genomes_project 11 122439304 122444087 + Afmid protein_coding retained_intron MGP_LPJ_T0033737.1 MGP_LPJ_G0019357.1 mouse_genomes_project 11 122439347 122442380 + Afmid protein_coding retained_intron MGP_LPJ_T0003238.1 MGP_LPJ_G0003000.1 mouse_genomes_project 11 70285927 70287254 + Cntrobos antisense antisense MGP_LPJ_T0030678.1 MGP_LPJ_G0018630.1 mouse_genomes_project 11 77420820 77573551 - MGP_LPJ_P0030678 Vps53 protein_coding protein_coding MGP_LPJ_T0030679.1 MGP_LPJ_G0018630.1 mouse_genomes_project 11 77420890 77573528 - MGP_LPJ_P0030679 Vps53 protein_coding protein_coding MGP_LPJ_T0030680.1 MGP_LPJ_G0018630.1 mouse_genomes_project 11 77420891 77573521 - MGP_LPJ_P0030680 Vps53 protein_coding protein_coding MGP_LPJ_T0030681.1 MGP_LPJ_G0018630.1 mouse_genomes_project 11 77437435 77468045 - Vps53 protein_coding retained_intron MGP_LPJ_T0030682.1 MGP_LPJ_G0018630.1 mouse_genomes_project 11 77438374 77573403 - MGP_LPJ_P0030682 Vps53 protein_coding protein_coding MGP_LPJ_T0030683.1 MGP_LPJ_G0018630.1 mouse_genomes_project 11 77438379 77573403 - MGP_LPJ_P0030683 Vps53 protein_coding nonsense_mediated_decay MGP_LPJ_T0030684.1 MGP_LPJ_G0018630.1 mouse_genomes_project 11 77438379 77573420 - MGP_LPJ_P0030684 Vps53 protein_coding nonsense_mediated_decay MGP_LPJ_T0030685.1 MGP_LPJ_G0018630.1 mouse_genomes_project 11 77495066 77573436 - MGP_LPJ_P0030685 Vps53 protein_coding nonsense_mediated_decay MGP_LPJ_T0030686.1 MGP_LPJ_G0018630.1 mouse_genomes_project 11 77495681 77560267 - MGP_LPJ_P0030686 Vps53 protein_coding protein_coding MGP_LPJ_T0030688.1 MGP_LPJ_G0018630.1 mouse_genomes_project 11 77499450 77573491 - Vps53 protein_coding retained_intron MGP_LPJ_T0030689.1 MGP_LPJ_G0018630.1 mouse_genomes_project 11 77499566 77569736 - Vps53 protein_coding processed_transcript MGP_LPJ_T0030690.1 MGP_LPJ_G0018630.1 mouse_genomes_project 11 77499571 77516937 - Vps53 protein_coding processed_transcript MGP_LPJ_T0030691.1 MGP_LPJ_G0018630.1 mouse_genomes_project 11 77512657 77547590 - Vps53 protein_coding processed_transcript MGP_LPJ_T0030692.1 MGP_LPJ_G0018630.1 mouse_genomes_project 11 77514433 77573538 - MGP_LPJ_P0030692 Vps53 protein_coding protein_coding MGP_LPJ_T0030693.1 MGP_LPJ_G0018630.1 mouse_genomes_project 11 77564506 77573516 - Vps53 protein_coding processed_transcript MGP_LPJ_T0030694.1 MGP_LPJ_G0018630.1 mouse_genomes_project 11 77570906 77573542 - MGP_LPJ_P0030694 Vps53 protein_coding protein_coding MGP_LPJ_T0034175.1 MGP_LPJ_G0019447.1 mouse_genomes_project 11 126052461 126070988 + MGP_LPJ_P0034175 Narf protein_coding protein_coding MGP_LPJ_T0034176.1 MGP_LPJ_G0019447.1 mouse_genomes_project 11 126059740 126060651 + Narf protein_coding retained_intron MGP_LPJ_T0034177.1 MGP_LPJ_G0019447.1 mouse_genomes_project 11 126060222 126061014 + Narf protein_coding retained_intron MGP_LPJ_T0032446.1 MGP_LPJ_G0019096.1 mouse_genomes_project 11 104713362 104719811 + MGP_LPJ_P0032446 Aoc2 protein_coding protein_coding MGP_LPJ_T0032447.1 MGP_LPJ_G0019096.1 mouse_genomes_project 11 104713386 104719603 + MGP_LPJ_P0032447 Aoc2 protein_coding protein_coding MGP_LPJ_T0006362.1 MGP_LPJ_G0005303.1 mouse_genomes_project 11 106510948 106517557 - 2410004I01Rik lincRNA lincRNA MGP_LPJ_T0012669.1 MGP_LPJ_G0010760.1 mouse_genomes_project 11 78583046 78583375 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012604.1 MGP_LPJ_G0010695.1 mouse_genomes_project 11 54330240 54330538 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012566.1 MGP_LPJ_G0010657.1 mouse_genomes_project 11 40263337 40263881 + processed_pseudogene processed_pseudogene MGP_LPJ_T0032160.1 MGP_LPJ_G0018996.1 mouse_genomes_project 11 102548581 102555159 - MGP_LPJ_P0032160 Krt12 protein_coding protein_coding MGP_LPJ_T0006205.1 MGP_LPJ_G0005182.1 mouse_genomes_project 11 20294381 20302541 + Gm12051 lincRNA lincRNA MGP_LPJ_T0017109.1 MGP_LPJ_G0015071.1 mouse_genomes_project 11 20661192 20664282 + Gm20456 processed_transcript processed_transcript MGP_LPJ_T0009758.1 MGP_LPJ_G0007876.1 mouse_genomes_project 11 101267589 101267646 + Mir5119 miRNA miRNA MGP_LPJ_T0027620.1 MGP_LPJ_G0017867.1 mouse_genomes_project 11 378454 415991 - MGP_LPJ_P0027620 Rnf185 protein_coding protein_coding MGP_LPJ_T0027621.1 MGP_LPJ_G0017867.1 mouse_genomes_project 11 378454 415991 - MGP_LPJ_P0027621 Rnf185 protein_coding protein_coding MGP_LPJ_T0027622.1 MGP_LPJ_G0017867.1 mouse_genomes_project 11 380348 415962 - Rnf185 protein_coding processed_transcript MGP_LPJ_T0033427.1 MGP_LPJ_G0019302.1 mouse_genomes_project 11 120247713 120262075 - MGP_LPJ_P0033427 Caskin2 protein_coding protein_coding MGP_LPJ_T0033428.1 MGP_LPJ_G0019302.1 mouse_genomes_project 11 120248530 120249412 - Caskin2 protein_coding processed_transcript MGP_LPJ_T0033429.1 MGP_LPJ_G0019302.1 mouse_genomes_project 11 120253266 120256554 - MGP_LPJ_P0033429 Caskin2 protein_coding protein_coding MGP_LPJ_T0033430.1 MGP_LPJ_G0019302.1 mouse_genomes_project 11 120255228 120262084 - MGP_LPJ_P0033430 Caskin2 protein_coding protein_coding MGP_LPJ_T0034142.1 MGP_LPJ_G0019438.1 mouse_genomes_project 11 125847431 125850127 - MGP_LPJ_P0034142 Cd7 protein_coding protein_coding MGP_LPJ_T0034143.1 MGP_LPJ_G0019438.1 mouse_genomes_project 11 125848593 125850127 - Cd7 protein_coding retained_intron MGP_LPJ_T0033271.1 MGP_LPJ_G0019272.1 mouse_genomes_project 11 119422076 119432233 - MGP_LPJ_P0033271 Cd300e protein_coding protein_coding MGP_LPJ_T0012690.1 MGP_LPJ_G0010781.1 mouse_genomes_project 11 84537015 84537417 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017196.1 MGP_LPJ_G0015122.1 mouse_genomes_project 11 103703846 103704591 + Gm12348 processed_transcript processed_transcript MGP_LPJ_T0006232.1 MGP_LPJ_G0005203.1 mouse_genomes_project 11 30508498 30514454 - Gm12108 lincRNA lincRNA MGP_LPJ_T0012774.1 MGP_LPJ_G0010865.1 mouse_genomes_project 11 121017113 121017416 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003237.1 MGP_LPJ_G0002999.1 mouse_genomes_project 11 70050278 70053026 - 9330160F10Rik antisense antisense MGP_LPJ_T0032343.1 MGP_LPJ_G0019075.1 mouse_genomes_project 11 104305024 104319184 - MGP_LPJ_P0032343 Ptrf protein_coding protein_coding MGP_LPJ_T0032344.1 MGP_LPJ_G0019075.1 mouse_genomes_project 11 104312703 104318848 - Ptrf protein_coding processed_transcript MGP_LPJ_T0003346.1 MGP_LPJ_G0003087.1 mouse_genomes_project 11 112077521 112089791 + Gm11655 antisense antisense MGP_LPJ_T0029896.1 MGP_LPJ_G0018444.1 mouse_genomes_project 11 70618706 70624800 - MGP_LPJ_P0029896 Atp1b2 protein_coding protein_coding MGP_LPJ_T0029897.1 MGP_LPJ_G0018444.1 mouse_genomes_project 11 70618711 70624913 - Atp1b2 protein_coding processed_transcript MGP_LPJ_T0029898.1 MGP_LPJ_G0018444.1 mouse_genomes_project 11 70619636 70621712 - MGP_LPJ_P0029898 Atp1b2 protein_coding protein_coding MGP_LPJ_T0029899.1 MGP_LPJ_G0018444.1 mouse_genomes_project 11 70620328 70622584 - Atp1b2 protein_coding processed_transcript MGP_LPJ_T0029900.1 MGP_LPJ_G0018444.1 mouse_genomes_project 11 70621114 70622133 - Atp1b2 protein_coding processed_transcript MGP_LPJ_T0029406.1 MGP_LPJ_G0018336.1 mouse_genomes_project 11 61328548 61357610 + MGP_LPJ_P0029406 Dhrs7b protein_coding protein_coding MGP_LPJ_T0012501.1 MGP_LPJ_G0010592.1 mouse_genomes_project 11 17821260 17821483 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012650.1 MGP_LPJ_G0010741.1 mouse_genomes_project 11 71458065 71458709 + processed_pseudogene processed_pseudogene MGP_LPJ_T0033267.1 MGP_LPJ_G0019269.1 mouse_genomes_project 11 119352909 119365404 - MGP_LPJ_P0033267 Cd300ld protein_coding protein_coding MGP_LPJ_T0012754.1 MGP_LPJ_G0010845.1 mouse_genomes_project 11 111012351 111012888 + processed_pseudogene processed_pseudogene MGP_LPJ_T0030887.1 MGP_LPJ_G0018671.1 mouse_genomes_project 11 79707644 79712971 + MGP_LPJ_P0030887 Rab34 protein_coding protein_coding MGP_LPJ_T0030888.1 MGP_LPJ_G0018671.1 mouse_genomes_project 11 79708083 79713318 + MGP_LPJ_P0030888 Rab34 protein_coding protein_coding MGP_LPJ_T0030889.1 MGP_LPJ_G0018671.1 mouse_genomes_project 11 79708444 79709511 + Rab34 protein_coding retained_intron MGP_LPJ_T0030890.1 MGP_LPJ_G0018671.1 mouse_genomes_project 11 79708541 79713329 + MGP_LPJ_P0030890 Rab34 protein_coding protein_coding MGP_LPJ_T0030891.1 MGP_LPJ_G0018671.1 mouse_genomes_project 11 79708792 79712247 + Rab34 protein_coding retained_intron MGP_LPJ_T0030892.1 MGP_LPJ_G0018671.1 mouse_genomes_project 11 79709557 79710138 + Rab34 protein_coding retained_intron MGP_LPJ_T0028170.1 MGP_LPJ_G0017996.1 mouse_genomes_project 11 21152569 21347341 + MGP_LPJ_P0028170 protein_coding protein_coding MGP_LPJ_T0028171.1 MGP_LPJ_G0017996.1 mouse_genomes_project 11 21152590 21346525 + MGP_LPJ_P0028171 protein_coding protein_coding MGP_LPJ_T0028172.1 MGP_LPJ_G0017996.1 mouse_genomes_project 11 21266675 21273125 + protein_coding processed_transcript MGP_LPJ_T0028173.1 MGP_LPJ_G0017996.1 mouse_genomes_project 11 21272527 21312094 + MGP_LPJ_P0028173 protein_coding protein_coding MGP_LPJ_T0028174.1 MGP_LPJ_G0017996.1 mouse_genomes_project 11 21313383 21316351 + protein_coding processed_transcript MGP_LPJ_T0028175.1 MGP_LPJ_G0017996.1 mouse_genomes_project 11 21313522 21316052 + protein_coding processed_transcript MGP_LPJ_T0028176.1 MGP_LPJ_G0017996.1 mouse_genomes_project 11 21327088 21345149 + MGP_LPJ_P0028176 protein_coding protein_coding MGP_LPJ_T0028177.1 MGP_LPJ_G0017996.1 mouse_genomes_project 11 21343585 21344104 + protein_coding processed_transcript MGP_LPJ_T0027865.1 MGP_LPJ_G0017924.1 mouse_genomes_project 11 3141992 3235429 - MGP_LPJ_P0027865 Camk2b protein_coding protein_coding MGP_LPJ_T0027866.1 MGP_LPJ_G0017924.1 mouse_genomes_project 11 3142017 3156455 - Camk2b protein_coding processed_transcript MGP_LPJ_T0027867.1 MGP_LPJ_G0017924.1 mouse_genomes_project 11 3142021 3235429 - MGP_LPJ_P0027867 Camk2b protein_coding protein_coding MGP_LPJ_T0027868.1 MGP_LPJ_G0017924.1 mouse_genomes_project 11 3142021 3235244 - MGP_LPJ_P0027868 Camk2b protein_coding protein_coding MGP_LPJ_T0027869.1 MGP_LPJ_G0017924.1 mouse_genomes_project 11 3143903 3235244 - MGP_LPJ_P0027869 Camk2b protein_coding protein_coding MGP_LPJ_T0027870.1 MGP_LPJ_G0017924.1 mouse_genomes_project 11 3144004 3235263 - MGP_LPJ_P0027870 Camk2b protein_coding protein_coding MGP_LPJ_T0027871.1 MGP_LPJ_G0017924.1 mouse_genomes_project 11 3144007 3235423 - MGP_LPJ_P0027871 Camk2b protein_coding protein_coding MGP_LPJ_T0027872.1 MGP_LPJ_G0017924.1 mouse_genomes_project 11 3144007 3235226 - MGP_LPJ_P0027872 Camk2b protein_coding protein_coding MGP_LPJ_T0027873.1 MGP_LPJ_G0017924.1 mouse_genomes_project 11 3144015 3235293 - MGP_LPJ_P0027873 Camk2b protein_coding protein_coding MGP_LPJ_T0027874.1 MGP_LPJ_G0017924.1 mouse_genomes_project 11 3144070 3235219 - MGP_LPJ_P0027874 Camk2b protein_coding protein_coding MGP_LPJ_T0027875.1 MGP_LPJ_G0017924.1 mouse_genomes_project 11 3144552 3235251 - MGP_LPJ_P0027875 Camk2b protein_coding protein_coding MGP_LPJ_T0027876.1 MGP_LPJ_G0017924.1 mouse_genomes_project 11 3160417 3235219 - Camk2b protein_coding processed_transcript MGP_LPJ_T0027877.1 MGP_LPJ_G0017924.1 mouse_genomes_project 11 3162711 3172650 - Camk2b protein_coding processed_transcript MGP_LPJ_T0027878.1 MGP_LPJ_G0017924.1 mouse_genomes_project 11 3165148 3236043 - Camk2b protein_coding processed_transcript MGP_LPJ_T0027879.1 MGP_LPJ_G0017924.1 mouse_genomes_project 11 3178742 3235339 - Camk2b protein_coding processed_transcript MGP_LPJ_T0100164.1 MGP_LPJ_G0038427.1 mouse_genomes_project 11 79143327 79143459 - Gm23132 snoRNA snoRNA MGP_LPJ_T0031092.1 MGP_LPJ_G0018720.1 mouse_genomes_project 11 82566660 82576910 + MGP_LPJ_P0031092 Spaca3 protein_coding protein_coding MGP_LPJ_T0031093.1 MGP_LPJ_G0018720.1 mouse_genomes_project 11 82566667 82576914 + MGP_LPJ_P0031093 Spaca3 protein_coding protein_coding MGP_LPJ_T0101770.1 MGP_LPJ_G0039808.1 mouse_genomes_project 11 74753162 74754097 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0029433.1 MGP_LPJ_G0018343.1 mouse_genomes_project 11 61732088 61736885 + MGP_LPJ_P0029433 Aldh3a1 protein_coding protein_coding MGP_LPJ_T0029434.1 MGP_LPJ_G0018343.1 mouse_genomes_project 11 61733172 61742970 + MGP_LPJ_P0029434 Aldh3a1 protein_coding protein_coding MGP_LPJ_T0029435.1 MGP_LPJ_G0018343.1 mouse_genomes_project 11 61733296 61742970 + MGP_LPJ_P0029435 Aldh3a1 protein_coding protein_coding MGP_LPJ_T0003314.1 MGP_LPJ_G0003057.1 mouse_genomes_project 11 103334205 103372226 + Gm11571 antisense antisense MGP_LPJ_T0003263.1 MGP_LPJ_G0003022.1 mouse_genomes_project 11 84572947 84574389 - Gm11423 antisense antisense MGP_LPJ_T0003264.1 MGP_LPJ_G0003022.1 mouse_genomes_project 11 84573177 84574389 - Gm11423 antisense antisense MGP_LPJ_T0006309.1 MGP_LPJ_G0005268.1 mouse_genomes_project 11 81669089 81678446 - Gm26563 lincRNA lincRNA MGP_LPJ_T0006310.1 MGP_LPJ_G0005268.1 mouse_genomes_project 11 81670215 81686535 - Gm26563 lincRNA lincRNA MGP_LPJ_T0033999.1 MGP_LPJ_G0019412.1 mouse_genomes_project 11 125315888 125324168 - Fam195b protein_coding processed_transcript MGP_LPJ_T0034000.1 MGP_LPJ_G0019412.1 mouse_genomes_project 11 125315888 125324194 - MGP_LPJ_P0034000 Fam195b protein_coding protein_coding MGP_LPJ_T0012779.1 MGP_LPJ_G0010870.1 mouse_genomes_project 11 124382054 124382499 - processed_pseudogene processed_pseudogene MGP_LPJ_T0032818.1 MGP_LPJ_G0019169.1 mouse_genomes_project 11 107319402 107341873 - MGP_LPJ_P0032818 Wnt9b protein_coding protein_coding MGP_LPJ_T0011311.1 MGP_LPJ_G0009429.1 mouse_genomes_project 11 15100551 15100875 + Gm23959 misc_RNA misc_RNA MGP_LPJ_T0003205.1 MGP_LPJ_G0002974.1 mouse_genomes_project 11 60407706 60408909 - Med9os antisense antisense MGP_LPJ_T0003206.1 MGP_LPJ_G0002974.1 mouse_genomes_project 11 60407706 60408960 - Med9os antisense antisense MGP_LPJ_T0003207.1 MGP_LPJ_G0002974.1 mouse_genomes_project 11 60407706 60408959 - Med9os antisense antisense MGP_LPJ_T0003336.1 MGP_LPJ_G0003078.1 mouse_genomes_project 11 109771453 109772155 - Gm11646 antisense antisense MGP_LPJ_T0006345.1 MGP_LPJ_G0005292.1 mouse_genomes_project 11 98666891 98667904 - Gm11527 lincRNA lincRNA MGP_LPJ_T0028291.1 MGP_LPJ_G0018021.1 mouse_genomes_project 11 27964045 28016645 + MGP_LPJ_P0028291 Rtn4 protein_coding protein_coding MGP_LPJ_T0028292.1 MGP_LPJ_G0018021.1 mouse_genomes_project 11 27964045 28018060 + MGP_LPJ_P0028292 Rtn4 protein_coding protein_coding MGP_LPJ_T0028293.1 MGP_LPJ_G0018021.1 mouse_genomes_project 11 27964045 28016645 + MGP_LPJ_P0028293 Rtn4 protein_coding protein_coding MGP_LPJ_T0028294.1 MGP_LPJ_G0018021.1 mouse_genomes_project 11 27964046 28015840 + MGP_LPJ_P0028294 Rtn4 protein_coding protein_coding MGP_LPJ_T0028295.1 MGP_LPJ_G0018021.1 mouse_genomes_project 11 27964872 28016645 + MGP_LPJ_P0028295 Rtn4 protein_coding protein_coding MGP_LPJ_T0028296.1 MGP_LPJ_G0018021.1 mouse_genomes_project 11 27992294 28016645 + MGP_LPJ_P0028296 Rtn4 protein_coding protein_coding MGP_LPJ_T0028297.1 MGP_LPJ_G0018021.1 mouse_genomes_project 11 28007421 28016164 + Rtn4 protein_coding processed_transcript MGP_LPJ_T0028298.1 MGP_LPJ_G0018021.1 mouse_genomes_project 11 28007496 28016076 + Rtn4 protein_coding processed_transcript MGP_LPJ_T0028299.1 MGP_LPJ_G0018021.1 mouse_genomes_project 11 28010119 28016076 + Rtn4 protein_coding processed_transcript MGP_LPJ_T0028300.1 MGP_LPJ_G0018021.1 mouse_genomes_project 11 28014723 28016014 + Rtn4 protein_coding processed_transcript MGP_LPJ_T0028163.1 MGP_LPJ_G0017995.1 mouse_genomes_project 11 21101243 21142757 + MGP_LPJ_P0028163 Xpo1 protein_coding protein_coding MGP_LPJ_T0028164.1 MGP_LPJ_G0017995.1 mouse_genomes_project 11 21101243 21142757 + MGP_LPJ_P0028164 Xpo1 protein_coding protein_coding MGP_LPJ_T0028165.1 MGP_LPJ_G0017995.1 mouse_genomes_project 11 21101257 21141393 + MGP_LPJ_P0028165 Xpo1 protein_coding protein_coding MGP_LPJ_T0028166.1 MGP_LPJ_G0017995.1 mouse_genomes_project 11 21101260 21127949 + Xpo1 protein_coding processed_transcript MGP_LPJ_T0028167.1 MGP_LPJ_G0017995.1 mouse_genomes_project 11 21101280 21143409 + MGP_LPJ_P0028167 Xpo1 protein_coding protein_coding MGP_LPJ_T0028168.1 MGP_LPJ_G0017995.1 mouse_genomes_project 11 21101791 21112934 + MGP_LPJ_P0028168 Xpo1 protein_coding protein_coding MGP_LPJ_T0028169.1 MGP_LPJ_G0017995.1 mouse_genomes_project 11 21129788 21132596 + MGP_LPJ_P0028169 Xpo1 protein_coding protein_coding MGP_LPJ_T0011326.1 MGP_LPJ_G0009444.1 mouse_genomes_project 11 97703880 97703996 + Gm24877 misc_RNA misc_RNA MGP_LPJ_T0017149.1 MGP_LPJ_G0015095.1 mouse_genomes_project 11 73340880 73344192 + 4930563E22Rik processed_transcript processed_transcript MGP_LPJ_T0017150.1 MGP_LPJ_G0015095.1 mouse_genomes_project 11 73340914 73344186 + 4930563E22Rik processed_transcript processed_transcript MGP_LPJ_T0029974.1 MGP_LPJ_G0018464.1 mouse_genomes_project 11 70868303 70880028 - MGP_LPJ_P0029974 Nlgn2 protein_coding protein_coding MGP_LPJ_T0029975.1 MGP_LPJ_G0018464.1 mouse_genomes_project 11 70868303 70884748 - MGP_LPJ_P0029975 Nlgn2 protein_coding protein_coding MGP_LPJ_T0029976.1 MGP_LPJ_G0018464.1 mouse_genomes_project 11 70872914 70879438 - MGP_LPJ_P0029976 Nlgn2 protein_coding protein_coding MGP_LPJ_T0029977.1 MGP_LPJ_G0018464.1 mouse_genomes_project 11 70873219 70873735 - Nlgn2 protein_coding retained_intron MGP_LPJ_T0012652.1 MGP_LPJ_G0010743.1 mouse_genomes_project 11 71628540 71628859 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098946.1 MGP_LPJ_G0037209.1 mouse_genomes_project 11 104798536 104798717 - Gm25475 snRNA snRNA MGP_LPJ_T0028463.1 MGP_LPJ_G0018067.1 mouse_genomes_project 11 34429741 34455890 - MGP_LPJ_P0028463 Rars protein_coding protein_coding MGP_LPJ_T0028464.1 MGP_LPJ_G0018067.1 mouse_genomes_project 11 34437028 34441470 - Rars protein_coding processed_transcript MGP_LPJ_T0028465.1 MGP_LPJ_G0018067.1 mouse_genomes_project 11 34438788 34442864 - Rars protein_coding retained_intron MGP_LPJ_T0028466.1 MGP_LPJ_G0018067.1 mouse_genomes_project 11 34442497 34446492 - Rars protein_coding retained_intron MGP_LPJ_T0028467.1 MGP_LPJ_G0018067.1 mouse_genomes_project 11 34447853 34455845 - Rars protein_coding processed_transcript MGP_LPJ_T0011313.1 MGP_LPJ_G0009431.1 mouse_genomes_project 11 41879495 41879807 + Gm25543 misc_RNA misc_RNA MGP_LPJ_T0098909.1 MGP_LPJ_G0037172.1 mouse_genomes_project 11 62490147 62490254 - Gm23721 snRNA snRNA MGP_LPJ_T0032154.1 MGP_LPJ_G0018991.1 mouse_genomes_project 11 102441200 102449415 - MGP_LPJ_P0032154 Krt25 protein_coding protein_coding MGP_LPJ_T0031109.1 MGP_LPJ_G0018730.1 mouse_genomes_project 11 84169917 84231323 + MGP_LPJ_P0031109 Tmem132e protein_coding protein_coding MGP_LPJ_T0031110.1 MGP_LPJ_G0018730.1 mouse_genomes_project 11 84169917 84231328 + MGP_LPJ_P0031110 Tmem132e protein_coding protein_coding MGP_LPJ_T0031111.1 MGP_LPJ_G0018730.1 mouse_genomes_project 11 84170140 84219719 + Tmem132e protein_coding processed_transcript MGP_LPJ_T0031112.1 MGP_LPJ_G0018730.1 mouse_genomes_project 11 84223252 84227895 + Tmem132e protein_coding retained_intron MGP_LPJ_T0098947.1 MGP_LPJ_G0037210.1 mouse_genomes_project 11 105032415 105032606 + Gm26316 snRNA snRNA MGP_LPJ_T0098484.1 MGP_LPJ_G0036762.1 mouse_genomes_project 11 123526089 123527053 - Gm11749 sense_intronic sense_intronic MGP_LPJ_T0031222.1 MGP_LPJ_G0018767.1 mouse_genomes_project 11 85893353 85974680 + MGP_LPJ_P0031222 Synrg protein_coding protein_coding MGP_LPJ_T0031223.1 MGP_LPJ_G0018767.1 mouse_genomes_project 11 85893353 85971093 + MGP_LPJ_P0031223 Synrg protein_coding protein_coding MGP_LPJ_T0031224.1 MGP_LPJ_G0018767.1 mouse_genomes_project 11 85893401 85971067 + MGP_LPJ_P0031224 Synrg protein_coding protein_coding MGP_LPJ_T0031225.1 MGP_LPJ_G0018767.1 mouse_genomes_project 11 85893401 85971067 + MGP_LPJ_P0031225 Synrg protein_coding protein_coding MGP_LPJ_T0031226.1 MGP_LPJ_G0018767.1 mouse_genomes_project 11 85911740 85920113 + Synrg protein_coding processed_transcript MGP_LPJ_T0031227.1 MGP_LPJ_G0018767.1 mouse_genomes_project 11 85912581 85921173 + MGP_LPJ_P0031227 Synrg protein_coding protein_coding MGP_LPJ_T0031228.1 MGP_LPJ_G0018767.1 mouse_genomes_project 11 85920112 85921589 + Synrg protein_coding retained_intron MGP_LPJ_T0031229.1 MGP_LPJ_G0018767.1 mouse_genomes_project 11 85949484 85971550 + Synrg protein_coding retained_intron MGP_LPJ_T0031230.1 MGP_LPJ_G0018767.1 mouse_genomes_project 11 85956803 85970149 + Synrg protein_coding retained_intron MGP_LPJ_T0031040.1 MGP_LPJ_G0018709.1 mouse_genomes_project 11 81799385 81805288 - MGP_LPJ_P0031040 Tefm protein_coding protein_coding MGP_LPJ_T0031041.1 MGP_LPJ_G0018709.1 mouse_genomes_project 11 81799385 81803022 - MGP_LPJ_P0031041 Tefm protein_coding protein_coding MGP_LPJ_T0031042.1 MGP_LPJ_G0018709.1 mouse_genomes_project 11 81800653 81805256 - MGP_LPJ_P0031042 Tefm protein_coding protein_coding MGP_LPJ_T0009726.1 MGP_LPJ_G0007844.1 mouse_genomes_project 11 76498093 76498159 + Mir132 miRNA miRNA MGP_LPJ_T0028207.1 MGP_LPJ_G0018002.1 mouse_genomes_project 11 21599068 21632928 - MGP_LPJ_P0028207 Rel protein_coding protein_coding MGP_LPJ_T0012487.1 MGP_LPJ_G0010578.1 mouse_genomes_project 11 14174126 14175039 - processed_pseudogene processed_pseudogene MGP_LPJ_T0034197.1 MGP_LPJ_G0019454.1 mouse_genomes_project 11 126340438 126348789 - MGP_LPJ_P0034197 Zfp750 protein_coding protein_coding MGP_LPJ_T0030251.1 MGP_LPJ_G0018516.1 mouse_genomes_project 11 71789310 71794943 - MGP_LPJ_P0030251 Spag7 protein_coding protein_coding MGP_LPJ_T0030252.1 MGP_LPJ_G0018516.1 mouse_genomes_project 11 71789530 71794745 - Spag7 protein_coding retained_intron MGP_LPJ_T0030253.1 MGP_LPJ_G0018516.1 mouse_genomes_project 11 71789867 71794806 - Spag7 protein_coding retained_intron MGP_LPJ_T0030254.1 MGP_LPJ_G0018516.1 mouse_genomes_project 11 71789926 71794817 - MGP_LPJ_P0030254 Spag7 protein_coding protein_coding MGP_LPJ_T0012666.1 MGP_LPJ_G0010757.1 mouse_genomes_project 11 76039710 76039878 - processed_pseudogene processed_pseudogene MGP_LPJ_T0028002.1 MGP_LPJ_G0017957.1 mouse_genomes_project 11 9214437 9304590 - MGP_LPJ_P0028002 Ddc protein_coding protein_coding MGP_LPJ_T0028003.1 MGP_LPJ_G0017957.1 mouse_genomes_project 11 9214437 9304490 - MGP_LPJ_P0028003 Ddc protein_coding protein_coding MGP_LPJ_T0028004.1 MGP_LPJ_G0017957.1 mouse_genomes_project 11 9214439 9223228 - Ddc protein_coding processed_transcript MGP_LPJ_T0028005.1 MGP_LPJ_G0017957.1 mouse_genomes_project 11 9214439 9296749 - MGP_LPJ_P0028005 Ddc protein_coding protein_coding MGP_LPJ_T0028006.1 MGP_LPJ_G0017957.1 mouse_genomes_project 11 9219681 9238001 - Ddc protein_coding processed_transcript MGP_LPJ_T0028007.1 MGP_LPJ_G0017957.1 mouse_genomes_project 11 9246685 9271050 - Ddc protein_coding processed_transcript MGP_LPJ_T0028008.1 MGP_LPJ_G0017957.1 mouse_genomes_project 11 9249638 9296710 - MGP_LPJ_P0028008 Ddc protein_coding protein_coding MGP_LPJ_T0028009.1 MGP_LPJ_G0017957.1 mouse_genomes_project 11 9267922 9296742 - Ddc protein_coding processed_transcript MGP_LPJ_T0028010.1 MGP_LPJ_G0017957.1 mouse_genomes_project 11 9279909 9287045 - Ddc protein_coding processed_transcript MGP_LPJ_T0028011.1 MGP_LPJ_G0017957.1 mouse_genomes_project 11 9281848 9296739 - Ddc protein_coding processed_transcript MGP_LPJ_T0012475.1 MGP_LPJ_G0010566.1 mouse_genomes_project 11 7701382 7701695 - processed_pseudogene processed_pseudogene MGP_LPJ_T0030077.1 MGP_LPJ_G0018482.1 mouse_genomes_project 11 71076071 71086067 + MGP_LPJ_P0030077 Dvl2 protein_coding protein_coding MGP_LPJ_T0030078.1 MGP_LPJ_G0018482.1 mouse_genomes_project 11 71076093 71088257 + MGP_LPJ_P0030078 Dvl2 protein_coding protein_coding MGP_LPJ_T0030079.1 MGP_LPJ_G0018482.1 mouse_genomes_project 11 71076297 71082917 + Dvl2 protein_coding retained_intron MGP_LPJ_T0030080.1 MGP_LPJ_G0018482.1 mouse_genomes_project 11 71076311 71081969 + Dvl2 protein_coding retained_intron MGP_LPJ_T0030081.1 MGP_LPJ_G0018482.1 mouse_genomes_project 11 71080934 71083429 + Dvl2 protein_coding retained_intron MGP_LPJ_T0030082.1 MGP_LPJ_G0018482.1 mouse_genomes_project 11 71082935 71084025 + Dvl2 protein_coding retained_intron MGP_LPJ_T0028208.1 MGP_LPJ_G0018003.1 mouse_genomes_project 11 21726536 21759437 - MGP_LPJ_P0028208 Papolg protein_coding protein_coding MGP_LPJ_T0028209.1 MGP_LPJ_G0018003.1 mouse_genomes_project 11 21729133 21732360 - MGP_LPJ_P0028209 Papolg protein_coding protein_coding MGP_LPJ_T0028210.1 MGP_LPJ_G0018003.1 mouse_genomes_project 11 21730300 21756088 - Papolg protein_coding processed_transcript MGP_LPJ_T0028211.1 MGP_LPJ_G0018003.1 mouse_genomes_project 11 21733938 21759420 - MGP_LPJ_P0028211 Papolg protein_coding protein_coding MGP_LPJ_T0098902.1 MGP_LPJ_G0037165.1 mouse_genomes_project 11 51656471 51656579 + Gm26061 snRNA snRNA MGP_LPJ_T0028574.1 MGP_LPJ_G0018093.1 mouse_genomes_project 11 44965872 45035217 + MGP_LPJ_P0028574 Clint1 protein_coding protein_coding MGP_LPJ_T0028575.1 MGP_LPJ_G0018093.1 mouse_genomes_project 11 44965872 45035217 + MGP_LPJ_P0028575 Clint1 protein_coding protein_coding MGP_LPJ_T0028576.1 MGP_LPJ_G0018093.1 mouse_genomes_project 11 44998375 45035217 + Clint1 protein_coding processed_transcript MGP_LPJ_T0027669.1 MGP_LPJ_G0017878.1 mouse_genomes_project 11 937600 984035 - MGP_LPJ_P0027669 4930556J24Rik protein_coding protein_coding MGP_LPJ_T0027684.1 MGP_LPJ_G0017882.1 mouse_genomes_project 11 1096456 1113449 + MGP_LPJ_P0027684 Sec14l3 protein_coding protein_coding MGP_LPJ_T0027685.1 MGP_LPJ_G0017882.1 mouse_genomes_project 11 1096506 1103220 + Sec14l3 protein_coding retained_intron MGP_LPJ_T0027686.1 MGP_LPJ_G0017882.1 mouse_genomes_project 11 1096567 1112038 + Sec14l3 protein_coding processed_transcript MGP_LPJ_T0027687.1 MGP_LPJ_G0017882.1 mouse_genomes_project 11 1096567 1112038 + Sec14l3 protein_coding processed_transcript MGP_LPJ_T0027688.1 MGP_LPJ_G0017882.1 mouse_genomes_project 11 1105180 1112474 + Sec14l3 protein_coding processed_transcript MGP_LPJ_T0003196.1 MGP_LPJ_G0002966.1 mouse_genomes_project 11 57778048 57780604 - 4933426K07Rik antisense antisense MGP_LPJ_T0101780.1 MGP_LPJ_G0039818.1 mouse_genomes_project 11 85598206 85612509 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0006378.1 MGP_LPJ_G0005315.1 mouse_genomes_project 11 117428798 117435132 - 4732490B19Rik lincRNA lincRNA MGP_LPJ_T0031977.1 MGP_LPJ_G0018949.1 mouse_genomes_project 11 100902875 100970964 - MGP_LPJ_P0031977 Plxdc1 protein_coding protein_coding MGP_LPJ_T0031978.1 MGP_LPJ_G0018949.1 mouse_genomes_project 11 100903293 100970919 - MGP_LPJ_P0031978 Plxdc1 protein_coding protein_coding MGP_LPJ_T0031979.1 MGP_LPJ_G0018949.1 mouse_genomes_project 11 100916509 100970953 - Plxdc1 protein_coding processed_transcript MGP_LPJ_T0031980.1 MGP_LPJ_G0018949.1 mouse_genomes_project 11 100963069 100970950 - MGP_LPJ_P0031980 Plxdc1 protein_coding protein_coding MGP_LPJ_T0012545.1 MGP_LPJ_G0010636.1 mouse_genomes_project 11 29178537 29178899 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009735.1 MGP_LPJ_G0007853.1 mouse_genomes_project 11 80319360 80319457 - Gm23840 miRNA miRNA MGP_LPJ_T0030608.1 MGP_LPJ_G0018614.1 mouse_genomes_project 11 76761037 76771596 - MGP_LPJ_P0030608 Serpinf2 protein_coding protein_coding MGP_LPJ_T0030609.1 MGP_LPJ_G0018614.1 mouse_genomes_project 11 76761041 76772197 - MGP_LPJ_P0030609 Serpinf2 protein_coding protein_coding MGP_LPJ_T0030610.1 MGP_LPJ_G0018614.1 mouse_genomes_project 11 76768678 76772287 - MGP_LPJ_P0030610 Serpinf2 protein_coding protein_coding MGP_LPJ_T0030611.1 MGP_LPJ_G0018614.1 mouse_genomes_project 11 76769197 76772274 - MGP_LPJ_P0030611 Serpinf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0003223.1 MGP_LPJ_G0002989.1 mouse_genomes_project 11 63614069 63627733 - Cdrt4os1 antisense antisense MGP_LPJ_T0003224.1 MGP_LPJ_G0002989.1 mouse_genomes_project 11 63622719 63627739 - Cdrt4os1 antisense antisense MGP_LPJ_T0032045.1 MGP_LPJ_G0018966.1 mouse_genomes_project 11 101489244 101577700 - MGP_LPJ_P0032045 Ikzf3 protein_coding protein_coding MGP_LPJ_T0032046.1 MGP_LPJ_G0018966.1 mouse_genomes_project 11 101491600 101504114 - Ikzf3 protein_coding processed_transcript MGP_LPJ_T0032047.1 MGP_LPJ_G0018966.1 mouse_genomes_project 11 101510929 101516999 - Ikzf3 protein_coding processed_transcript MGP_LPJ_T0032048.1 MGP_LPJ_G0018966.1 mouse_genomes_project 11 101541168 101577931 - Ikzf3 protein_coding retained_intron MGP_LPJ_T0003288.1 MGP_LPJ_G0003039.1 mouse_genomes_project 11 98142451 98151387 - Gm29477 antisense antisense MGP_LPJ_T0028794.1 MGP_LPJ_G0018160.1 mouse_genomes_project 11 50371519 50391793 - MGP_LPJ_P0028794 Zfp354c protein_coding protein_coding MGP_LPJ_T0028795.1 MGP_LPJ_G0018160.1 mouse_genomes_project 11 50374997 50390561 - MGP_LPJ_P0028795 Zfp354c protein_coding protein_coding MGP_LPJ_T0028796.1 MGP_LPJ_G0018160.1 mouse_genomes_project 11 50377626 50391789 - Zfp354c protein_coding processed_transcript MGP_LPJ_T0028797.1 MGP_LPJ_G0018160.1 mouse_genomes_project 11 50390378 50391827 - Zfp354c protein_coding processed_transcript MGP_LPJ_T0032389.1 MGP_LPJ_G0019086.1 mouse_genomes_project 11 104545173 104554533 + Cntnap1 protein_coding processed_transcript MGP_LPJ_T0032391.1 MGP_LPJ_G0019086.1 mouse_genomes_project 11 104552261 104566957 + MGP_LPJ_P0032391 Cntnap1 protein_coding protein_coding MGP_LPJ_T0028319.1 MGP_LPJ_G0018026.1 mouse_genomes_project 11 29125056 29240509 + MGP_LPJ_P0028319 Psme4 protein_coding protein_coding MGP_LPJ_T0028320.1 MGP_LPJ_G0018026.1 mouse_genomes_project 11 29125652 29160645 + MGP_LPJ_P0028320 Psme4 protein_coding protein_coding MGP_LPJ_T0028321.1 MGP_LPJ_G0018026.1 mouse_genomes_project 11 29167815 29169981 + Psme4 protein_coding processed_transcript MGP_LPJ_T0028322.1 MGP_LPJ_G0018026.1 mouse_genomes_project 11 29186376 29190395 + Psme4 protein_coding processed_transcript MGP_LPJ_T0028323.1 MGP_LPJ_G0018026.1 mouse_genomes_project 11 29188655 29189285 + Psme4 protein_coding processed_transcript MGP_LPJ_T0028324.1 MGP_LPJ_G0018026.1 mouse_genomes_project 11 29211643 29216017 + MGP_LPJ_P0028324 Psme4 protein_coding protein_coding MGP_LPJ_T0028325.1 MGP_LPJ_G0018026.1 mouse_genomes_project 11 29224311 29233059 + Psme4 protein_coding processed_transcript MGP_LPJ_T0028479.1 MGP_LPJ_G0018070.1 mouse_genomes_project 11 39580567 39594028 - MGP_LPJ_P0028479 Mat2b protein_coding protein_coding MGP_LPJ_T0028480.1 MGP_LPJ_G0018070.1 mouse_genomes_project 11 39580567 39596454 - MGP_LPJ_P0028480 Mat2b protein_coding protein_coding MGP_LPJ_T0028481.1 MGP_LPJ_G0018070.1 mouse_genomes_project 11 39581910 39593875 - MGP_LPJ_P0028481 Mat2b protein_coding nonsense_mediated_decay MGP_LPJ_T0028482.1 MGP_LPJ_G0018070.1 mouse_genomes_project 11 39581964 39586499 - Mat2b protein_coding retained_intron MGP_LPJ_T0028483.1 MGP_LPJ_G0018070.1 mouse_genomes_project 11 39585978 39587092 - Mat2b protein_coding retained_intron MGP_LPJ_T0028484.1 MGP_LPJ_G0018070.1 mouse_genomes_project 11 39586757 39593882 - Mat2b protein_coding retained_intron MGP_LPJ_T0028485.1 MGP_LPJ_G0018070.1 mouse_genomes_project 11 39588611 39596238 - Mat2b protein_coding retained_intron MGP_LPJ_T0032235.1 MGP_LPJ_G0019053.1 mouse_genomes_project 11 103669681 103673389 - Jup protein_coding processed_transcript MGP_LPJ_T0032236.1 MGP_LPJ_G0019053.1 mouse_genomes_project 11 103671342 103699057 - MGP_LPJ_P0032236 Jup protein_coding protein_coding MGP_LPJ_T0032237.1 MGP_LPJ_G0019053.1 mouse_genomes_project 11 103671782 103674798 - Jup protein_coding processed_transcript MGP_LPJ_T0032238.1 MGP_LPJ_G0019053.1 mouse_genomes_project 11 103672968 103699057 - MGP_LPJ_P0032238 Jup protein_coding protein_coding MGP_LPJ_T0032239.1 MGP_LPJ_G0019053.1 mouse_genomes_project 11 103673029 103673981 - Jup protein_coding processed_transcript MGP_LPJ_T0032240.1 MGP_LPJ_G0019053.1 mouse_genomes_project 11 103682524 103684281 - Jup protein_coding processed_transcript MGP_LPJ_T0032241.1 MGP_LPJ_G0019053.1 mouse_genomes_project 11 103684503 103699071 - Jup protein_coding processed_transcript MGP_LPJ_T0032242.1 MGP_LPJ_G0019053.1 mouse_genomes_project 11 103684583 103688026 - Jup protein_coding processed_transcript MGP_LPJ_T0032243.1 MGP_LPJ_G0019053.1 mouse_genomes_project 11 103684592 103688055 - Jup protein_coding processed_transcript MGP_LPJ_T0028543.1 MGP_LPJ_G0018086.1 mouse_genomes_project 11 42704113 42729810 + MGP_LPJ_P0028543 Pwwp2a protein_coding protein_coding MGP_LPJ_T0028544.1 MGP_LPJ_G0018086.1 mouse_genomes_project 11 42704425 42742967 + MGP_LPJ_P0028544 Pwwp2a protein_coding protein_coding MGP_LPJ_T0028545.1 MGP_LPJ_G0018086.1 mouse_genomes_project 11 42704915 42706416 + Pwwp2a protein_coding processed_transcript MGP_LPJ_T0028546.1 MGP_LPJ_G0018086.1 mouse_genomes_project 11 42706506 42729810 + MGP_LPJ_P0028546 Pwwp2a protein_coding protein_coding MGP_LPJ_T0028547.1 MGP_LPJ_G0018086.1 mouse_genomes_project 11 42727601 42744044 + Pwwp2a protein_coding processed_transcript MGP_LPJ_T0028548.1 MGP_LPJ_G0018086.1 mouse_genomes_project 11 42740210 42743388 + Pwwp2a protein_coding processed_transcript MGP_LPJ_T0032065.1 MGP_LPJ_G0018971.1 mouse_genomes_project 11 101716425 101730654 + MGP_LPJ_P0032065 Gsdma protein_coding protein_coding MGP_LPJ_T0012556.1 MGP_LPJ_G0010647.1 mouse_genomes_project 11 33925515 33925987 - processed_pseudogene processed_pseudogene MGP_LPJ_T0031934.1 MGP_LPJ_G0018940.1 mouse_genomes_project 11 100651916 100656660 - MGP_LPJ_P0031934 Pcgf2 protein_coding protein_coding MGP_LPJ_T0031935.1 MGP_LPJ_G0018940.1 mouse_genomes_project 11 100651916 100662476 - MGP_LPJ_P0031935 Pcgf2 protein_coding protein_coding MGP_LPJ_T0031936.1 MGP_LPJ_G0018940.1 mouse_genomes_project 11 100652913 100665620 - MGP_LPJ_P0031936 Pcgf2 protein_coding protein_coding MGP_LPJ_T0031937.1 MGP_LPJ_G0018940.1 mouse_genomes_project 11 100652913 100662392 - MGP_LPJ_P0031937 Pcgf2 protein_coding protein_coding MGP_LPJ_T0031938.1 MGP_LPJ_G0018940.1 mouse_genomes_project 11 100653080 100657076 - MGP_LPJ_P0031938 Pcgf2 protein_coding protein_coding MGP_LPJ_T0031939.1 MGP_LPJ_G0018940.1 mouse_genomes_project 11 100653621 100655503 - Pcgf2 protein_coding processed_transcript MGP_LPJ_T0031940.1 MGP_LPJ_G0018940.1 mouse_genomes_project 11 100660290 100662392 - Pcgf2 protein_coding processed_transcript MGP_LPJ_T0033859.1 MGP_LPJ_G0019387.1 mouse_genomes_project 11 124214521 124235999 + MGP_LPJ_P0033859 Endov protein_coding protein_coding MGP_LPJ_T0033860.1 MGP_LPJ_G0019387.1 mouse_genomes_project 11 124214548 124231475 + MGP_LPJ_P0033860 Endov protein_coding nonsense_mediated_decay MGP_LPJ_T0033861.1 MGP_LPJ_G0019387.1 mouse_genomes_project 11 124214549 124233363 + MGP_LPJ_P0033861 Endov protein_coding nonsense_mediated_decay MGP_LPJ_T0033862.1 MGP_LPJ_G0019387.1 mouse_genomes_project 11 124214563 124231535 + MGP_LPJ_P0033862 Endov protein_coding protein_coding MGP_LPJ_T0033863.1 MGP_LPJ_G0019387.1 mouse_genomes_project 11 124214600 124231163 + MGP_LPJ_P0033863 Endov protein_coding protein_coding MGP_LPJ_T0033864.1 MGP_LPJ_G0019387.1 mouse_genomes_project 11 124214725 124229434 + MGP_LPJ_P0033864 Endov protein_coding nonsense_mediated_decay MGP_LPJ_T0033865.1 MGP_LPJ_G0019387.1 mouse_genomes_project 11 124214804 124236009 + MGP_LPJ_P0033865 Endov protein_coding protein_coding MGP_LPJ_T0033866.1 MGP_LPJ_G0019387.1 mouse_genomes_project 11 124214850 124225137 + Endov protein_coding retained_intron MGP_LPJ_T0033867.1 MGP_LPJ_G0019387.1 mouse_genomes_project 11 124214959 124227147 + Endov protein_coding processed_transcript MGP_LPJ_T0033868.1 MGP_LPJ_G0019387.1 mouse_genomes_project 11 124226297 124231173 + Endov protein_coding retained_intron MGP_LPJ_T0009741.1 MGP_LPJ_G0007859.1 mouse_genomes_project 11 89193399 89193485 + Mir301 miRNA miRNA MGP_LPJ_T0101782.1 MGP_LPJ_G0039820.1 mouse_genomes_project 11 97261032 97265042 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0098123.1 MGP_LPJ_G0036404.1 mouse_genomes_project 11 87803550 87803666 + Gm23473 rRNA rRNA MGP_LPJ_T0009751.1 MGP_LPJ_G0007869.1 mouse_genomes_project 11 100062922 100062978 - Mir7235 miRNA miRNA MGP_LPJ_T0100176.1 MGP_LPJ_G0038439.1 mouse_genomes_project 11 100752550 100752687 - Snora21 snoRNA snoRNA MGP_LPJ_T0028396.1 MGP_LPJ_G0018043.1 mouse_genomes_project 11 30738752 30747054 + MGP_LPJ_P0028396 Hbq1a protein_coding protein_coding MGP_LPJ_T0028397.1 MGP_LPJ_G0018043.1 mouse_genomes_project 11 30738788 30747111 + Hbq1a protein_coding retained_intron MGP_LPJ_T0028316.1 MGP_LPJ_G0018024.1 mouse_genomes_project 11 28756942 28796490 - MGP_LPJ_P0028316 4930505A04Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0028317.1 MGP_LPJ_G0018024.1 mouse_genomes_project 11 28756942 28796471 - MGP_LPJ_P0028317 4930505A04Rik protein_coding protein_coding MGP_LPJ_T0028196.1 MGP_LPJ_G0018000.1 mouse_genomes_project 11 21505877 21526407 - MGP_LPJ_P0028196 Pex13 protein_coding protein_coding MGP_LPJ_T0028197.1 MGP_LPJ_G0018000.1 mouse_genomes_project 11 21508854 21526300 - MGP_LPJ_P0028197 Pex13 protein_coding nonsense_mediated_decay MGP_LPJ_T0028198.1 MGP_LPJ_G0018000.1 mouse_genomes_project 11 21515256 21526290 - Pex13 protein_coding processed_transcript MGP_LPJ_T0028199.1 MGP_LPJ_G0018000.1 mouse_genomes_project 11 21515509 21526121 - Pex13 protein_coding processed_transcript MGP_LPJ_T0031132.1 MGP_LPJ_G0018735.1 mouse_genomes_project 11 84671964 84688488 - MGP_LPJ_P0031132 Rad51d protein_coding nonsense_mediated_decay MGP_LPJ_T0031133.1 MGP_LPJ_G0018735.1 mouse_genomes_project 11 84672229 84688513 - MGP_LPJ_P0031133 Rad51d protein_coding protein_coding MGP_LPJ_T0031134.1 MGP_LPJ_G0018735.1 mouse_genomes_project 11 84675551 84688488 - MGP_LPJ_P0031134 Rad51d protein_coding protein_coding MGP_LPJ_T0031135.1 MGP_LPJ_G0018735.1 mouse_genomes_project 11 84675551 84688488 - MGP_LPJ_P0031135 Rad51d protein_coding protein_coding MGP_LPJ_T0031136.1 MGP_LPJ_G0018735.1 mouse_genomes_project 11 84675551 84688488 - MGP_LPJ_P0031136 Rad51d protein_coding nonsense_mediated_decay MGP_LPJ_T0031137.1 MGP_LPJ_G0018735.1 mouse_genomes_project 11 84675551 84688488 - MGP_LPJ_P0031137 Rad51d protein_coding nonsense_mediated_decay MGP_LPJ_T0028913.1 MGP_LPJ_G0018194.1 mouse_genomes_project 11 52092953 52126154 + MGP_LPJ_P0028913 Vdac1 protein_coding protein_coding MGP_LPJ_T0028914.1 MGP_LPJ_G0018194.1 mouse_genomes_project 11 52093228 52125253 + MGP_LPJ_P0028914 Vdac1 protein_coding nonsense_mediated_decay MGP_LPJ_T0028915.1 MGP_LPJ_G0018194.1 mouse_genomes_project 11 52110836 52113512 + Vdac1 protein_coding processed_transcript MGP_LPJ_T0028916.1 MGP_LPJ_G0018194.1 mouse_genomes_project 11 52110999 52125280 + MGP_LPJ_P0028916 Vdac1 protein_coding protein_coding MGP_LPJ_T0028917.1 MGP_LPJ_G0018194.1 mouse_genomes_project 11 52123953 52125548 + Vdac1 protein_coding retained_intron MGP_LPJ_T0029255.1 MGP_LPJ_G0018305.1 mouse_genomes_project 11 59801960 59807002 - MGP_LPJ_P0029255 Prss38 protein_coding protein_coding MGP_LPJ_T0100179.1 MGP_LPJ_G0038442.1 mouse_genomes_project 11 102111396 102111518 - Gm23451 snoRNA snoRNA MGP_LPJ_T0028240.1 MGP_LPJ_G0018010.1 mouse_genomes_project 11 25777622 25778564 + MGP_LPJ_P0028240 Olfr1338 protein_coding protein_coding MGP_LPJ_T0098475.1 MGP_LPJ_G0036755.1 mouse_genomes_project 11 69184372 69185694 - Gm12305 sense_intronic sense_intronic MGP_LPJ_T0028429.1 MGP_LPJ_G0018055.1 mouse_genomes_project 11 32121198 32151597 - MGP_LPJ_P0028429 Gabrp protein_coding protein_coding MGP_LPJ_T0028430.1 MGP_LPJ_G0018055.1 mouse_genomes_project 11 32145017 32151599 - MGP_LPJ_P0028430 Gabrp protein_coding protein_coding MGP_LPJ_T0012738.1 MGP_LPJ_G0010829.1 mouse_genomes_project 11 106059821 106060142 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100125.1 MGP_LPJ_G0038388.1 mouse_genomes_project 11 8804628 8804756 - Gm26458 snoRNA snoRNA MGP_LPJ_T0031686.1 MGP_LPJ_G0018874.1 mouse_genomes_project 11 97681300 97698159 + MGP_LPJ_P0031686 Col1a1 protein_coding protein_coding MGP_LPJ_T0031687.1 MGP_LPJ_G0018874.1 mouse_genomes_project 11 97682762 97683180 + Col1a1 protein_coding processed_transcript MGP_LPJ_T0031688.1 MGP_LPJ_G0018874.1 mouse_genomes_project 11 97684088 97684818 + Col1a1 protein_coding retained_intron MGP_LPJ_T0031689.1 MGP_LPJ_G0018874.1 mouse_genomes_project 11 97690444 97691106 + Col1a1 protein_coding retained_intron MGP_LPJ_T0029212.1 MGP_LPJ_G0018290.1 mouse_genomes_project 11 59314539 59323162 + MGP_LPJ_P0029212 protein_coding protein_coding MGP_LPJ_T0029213.1 MGP_LPJ_G0018290.1 mouse_genomes_project 11 59314585 59323701 + MGP_LPJ_P0029213 protein_coding nonsense_mediated_decay MGP_LPJ_T0029214.1 MGP_LPJ_G0018290.1 mouse_genomes_project 11 59314690 59323508 + MGP_LPJ_P0029214 protein_coding protein_coding MGP_LPJ_T0029215.1 MGP_LPJ_G0018290.1 mouse_genomes_project 11 59314690 59323508 + MGP_LPJ_P0029215 protein_coding protein_coding MGP_LPJ_T0028594.1 MGP_LPJ_G0018100.1 mouse_genomes_project 11 45388427 45392770 + MGP_LPJ_P0028594 Fndc9 protein_coding protein_coding MGP_LPJ_T0030660.1 MGP_LPJ_G0018624.1 mouse_genomes_project 11 77030579 77057799 + MGP_LPJ_P0030660 Crk protein_coding protein_coding MGP_LPJ_T0030661.1 MGP_LPJ_G0018624.1 mouse_genomes_project 11 77030604 77058642 + MGP_LPJ_P0030661 Crk protein_coding protein_coding MGP_LPJ_T0030662.1 MGP_LPJ_G0018624.1 mouse_genomes_project 11 77030604 77055390 + MGP_LPJ_P0030662 Crk protein_coding protein_coding MGP_LPJ_T0030663.1 MGP_LPJ_G0018624.1 mouse_genomes_project 11 77030631 77052524 + MGP_LPJ_P0030663 Crk protein_coding protein_coding MGP_LPJ_T0030664.1 MGP_LPJ_G0018624.1 mouse_genomes_project 11 77030862 77052472 + MGP_LPJ_P0030664 Crk protein_coding protein_coding MGP_LPJ_T0012470.1 MGP_LPJ_G0010561.1 mouse_genomes_project 11 4096913 4098540 - processed_pseudogene processed_pseudogene MGP_LPJ_T0028077.1 MGP_LPJ_G0017974.1 mouse_genomes_project 11 17885099 17903414 + Rab1a protein_coding processed_transcript MGP_LPJ_T0028078.1 MGP_LPJ_G0017974.1 mouse_genomes_project 11 17885269 17907260 + Rab1a protein_coding processed_transcript MGP_LPJ_T0028079.1 MGP_LPJ_G0017974.1 mouse_genomes_project 11 17885290 17910493 + MGP_LPJ_P0028079 Rab1a protein_coding protein_coding MGP_LPJ_T0028704.1 MGP_LPJ_G0018133.1 mouse_genomes_project 11 48745768 48746704 + MGP_LPJ_P0028704 Olfr1391 protein_coding protein_coding MGP_LPJ_T0012733.1 MGP_LPJ_G0010824.1 mouse_genomes_project 11 104747303 104747523 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006244.1 MGP_LPJ_G0005215.1 mouse_genomes_project 11 42387277 42388995 + Gm12148 lincRNA lincRNA MGP_LPJ_T0031874.1 MGP_LPJ_G0018926.1 mouse_genomes_project 11 99947649 99955328 + MGP_LPJ_P0031874 Mrpl10 protein_coding protein_coding MGP_LPJ_T0031875.1 MGP_LPJ_G0018926.1 mouse_genomes_project 11 99947684 99954633 + MGP_LPJ_P0031875 Mrpl10 protein_coding protein_coding MGP_LPJ_T0031771.1 MGP_LPJ_G0018897.1 mouse_genomes_project 11 98774676 98828187 - MGP_LPJ_P0031771 Igf2bp1 protein_coding protein_coding MGP_LPJ_T0031772.1 MGP_LPJ_G0018897.1 mouse_genomes_project 11 98780948 98786274 - Igf2bp1 protein_coding processed_transcript MGP_LPJ_T0031773.1 MGP_LPJ_G0018897.1 mouse_genomes_project 11 98791380 98800831 - Igf2bp1 protein_coding processed_transcript MGP_LPJ_T0031774.1 MGP_LPJ_G0018897.1 mouse_genomes_project 11 98792215 98800848 - Igf2bp1 protein_coding processed_transcript MGP_LPJ_T0031775.1 MGP_LPJ_G0018897.1 mouse_genomes_project 11 98796618 98800845 - Igf2bp1 protein_coding processed_transcript MGP_LPJ_T0012548.1 MGP_LPJ_G0010639.1 mouse_genomes_project 11 29481755 29482534 + processed_pseudogene processed_pseudogene MGP_LPJ_T0031614.1 MGP_LPJ_G0018858.1 mouse_genomes_project 11 96949901 96964909 + MGP_LPJ_P0031614 Ankrd40 protein_coding protein_coding MGP_LPJ_T0031615.1 MGP_LPJ_G0018858.1 mouse_genomes_project 11 96949901 96967246 + MGP_LPJ_P0031615 Ankrd40 protein_coding protein_coding MGP_LPJ_T0031616.1 MGP_LPJ_G0018858.1 mouse_genomes_project 11 96963689 96965548 + Ankrd40 protein_coding retained_intron MGP_LPJ_T0030627.1 MGP_LPJ_G0018620.1 mouse_genomes_project 11 76873114 76884745 + MGP_LPJ_P0030627 Slc43a2 protein_coding protein_coding MGP_LPJ_T0030628.1 MGP_LPJ_G0018620.1 mouse_genomes_project 11 76873118 76918949 + MGP_LPJ_P0030628 Slc43a2 protein_coding protein_coding MGP_LPJ_T0030629.1 MGP_LPJ_G0018620.1 mouse_genomes_project 11 76873118 76915305 + MGP_LPJ_P0030629 Slc43a2 protein_coding protein_coding MGP_LPJ_T0030630.1 MGP_LPJ_G0018620.1 mouse_genomes_project 11 76873163 76887199 + MGP_LPJ_P0030630 Slc43a2 protein_coding protein_coding MGP_LPJ_T0030631.1 MGP_LPJ_G0018620.1 mouse_genomes_project 11 76873532 76918944 + MGP_LPJ_P0030631 Slc43a2 protein_coding protein_coding MGP_LPJ_T0030632.1 MGP_LPJ_G0018620.1 mouse_genomes_project 11 76873558 76887252 + MGP_LPJ_P0030632 Slc43a2 protein_coding protein_coding MGP_LPJ_T0030633.1 MGP_LPJ_G0018620.1 mouse_genomes_project 11 76874091 76918948 + MGP_LPJ_P0030633 Slc43a2 protein_coding unknown_likely_coding MGP_LPJ_T0030634.1 MGP_LPJ_G0018620.1 mouse_genomes_project 11 76879429 76887186 + Slc43a2 protein_coding processed_transcript MGP_LPJ_T0030635.1 MGP_LPJ_G0018620.1 mouse_genomes_project 11 76902228 76908481 + Slc43a2 protein_coding retained_intron MGP_LPJ_T0030636.1 MGP_LPJ_G0018620.1 mouse_genomes_project 11 76907420 76911605 + Slc43a2 protein_coding processed_transcript MGP_LPJ_T0030637.1 MGP_LPJ_G0018620.1 mouse_genomes_project 11 76908116 76913834 + Slc43a2 protein_coding retained_intron MGP_LPJ_T0030638.1 MGP_LPJ_G0018620.1 mouse_genomes_project 11 76908229 76913212 + Slc43a2 protein_coding processed_transcript MGP_LPJ_T0028443.1 MGP_LPJ_G0018060.1 mouse_genomes_project 11 32803466 32807229 - MGP_LPJ_P0028443 Foxi1 protein_coding protein_coding MGP_LPJ_T0029901.1 MGP_LPJ_G0018445.1 mouse_genomes_project 11 70633574 70636675 - MGP_LPJ_P0029901 Shbg protein_coding protein_coding MGP_LPJ_T0029902.1 MGP_LPJ_G0018445.1 mouse_genomes_project 11 70634418 70635711 - Shbg protein_coding processed_transcript MGP_LPJ_T0030639.1 MGP_LPJ_G0018621.1 mouse_genomes_project 11 76930993 76974339 + MGP_LPJ_P0030639 Pitpna protein_coding protein_coding MGP_LPJ_T0030640.1 MGP_LPJ_G0018621.1 mouse_genomes_project 11 76931004 76974313 + MGP_LPJ_P0030640 Pitpna protein_coding protein_coding MGP_LPJ_T0030641.1 MGP_LPJ_G0018621.1 mouse_genomes_project 11 76931015 76972265 + MGP_LPJ_P0030641 Pitpna protein_coding protein_coding MGP_LPJ_T0030642.1 MGP_LPJ_G0018621.1 mouse_genomes_project 11 76931055 76943402 + Pitpna protein_coding retained_intron MGP_LPJ_T0030643.1 MGP_LPJ_G0018621.1 mouse_genomes_project 11 76931055 76971968 + MGP_LPJ_P0030643 Pitpna protein_coding nonsense_mediated_decay MGP_LPJ_T0030644.1 MGP_LPJ_G0018621.1 mouse_genomes_project 11 76966209 76971841 + Pitpna protein_coding processed_transcript MGP_LPJ_T0098925.1 MGP_LPJ_G0037188.1 mouse_genomes_project 11 84382408 84382515 - Gm24612 snRNA snRNA MGP_LPJ_T0033522.1 MGP_LPJ_G0019318.1 mouse_genomes_project 11 120602303 120609351 - MGP_LPJ_P0033522 Mrpl38 protein_coding protein_coding MGP_LPJ_T0033523.1 MGP_LPJ_G0019318.1 mouse_genomes_project 11 120602307 120609258 - Mrpl38 protein_coding retained_intron MGP_LPJ_T0033524.1 MGP_LPJ_G0019318.1 mouse_genomes_project 11 120603271 120609272 - Mrpl38 protein_coding retained_intron MGP_LPJ_T0033525.1 MGP_LPJ_G0019318.1 mouse_genomes_project 11 120604542 120604937 - Mrpl38 protein_coding retained_intron MGP_LPJ_T0033526.1 MGP_LPJ_G0019318.1 mouse_genomes_project 11 120604736 120605108 - Mrpl38 protein_coding retained_intron MGP_LPJ_T0033527.1 MGP_LPJ_G0019318.1 mouse_genomes_project 11 120608262 120609348 - Mrpl38 protein_coding retained_intron MGP_LPJ_T0029774.1 MGP_LPJ_G0018417.1 mouse_genomes_project 11 69941619 69945935 + MGP_LPJ_P0029774 Slc25a35 protein_coding protein_coding MGP_LPJ_T0029775.1 MGP_LPJ_G0018417.1 mouse_genomes_project 11 69941635 69945201 + Slc25a35 protein_coding processed_transcript MGP_LPJ_T0029776.1 MGP_LPJ_G0018417.1 mouse_genomes_project 11 69941636 69947254 + MGP_LPJ_P0029776 Slc25a35 protein_coding protein_coding MGP_LPJ_T0032450.1 MGP_LPJ_G0019098.1 mouse_genomes_project 11 104765673 104775996 + MGP_LPJ_P0032450 G6pc protein_coding protein_coding MGP_LPJ_T0032185.1 MGP_LPJ_G0019019.1 mouse_genomes_project 11 102910990 102911068 - MGP_LPJ_P0032185 Gm14180 protein_coding protein_coding MGP_LPJ_T0006367.1 MGP_LPJ_G0005308.1 mouse_genomes_project 11 113842253 113844850 + 1700023C21Rik lincRNA lincRNA MGP_LPJ_T0100188.1 MGP_LPJ_G0038451.1 mouse_genomes_project 11 121204774 121204848 + Snord1a snoRNA snoRNA MGP_LPJ_T0012651.1 MGP_LPJ_G0010742.1 mouse_genomes_project 11 71532923 71533461 - processed_pseudogene processed_pseudogene MGP_LPJ_T0031162.1 MGP_LPJ_G0018746.1 mouse_genomes_project 11 85153060 85165091 - MGP_LPJ_P0031162 Slfn14 protein_coding protein_coding MGP_LPJ_T0101779.1 MGP_LPJ_G0039817.1 mouse_genomes_project 11 85589418 85590262 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0031085.1 MGP_LPJ_G0018717.1 mouse_genomes_project 11 82169073 82173235 + MGP_LPJ_P0031085 Cdk5r1 protein_coding protein_coding MGP_LPJ_T0031086.1 MGP_LPJ_G0018717.1 mouse_genomes_project 11 82169106 82169974 + MGP_LPJ_P0031086 Cdk5r1 protein_coding protein_coding MGP_LPJ_T0012536.1 MGP_LPJ_G0010627.1 mouse_genomes_project 11 27606802 27607060 + processed_pseudogene processed_pseudogene MGP_LPJ_T0030739.1 MGP_LPJ_G0018643.1 mouse_genomes_project 11 78368354 78382900 + MGP_LPJ_P0030739 Tmigd1 protein_coding protein_coding MGP_LPJ_T0030740.1 MGP_LPJ_G0018643.1 mouse_genomes_project 11 78370670 78376388 + MGP_LPJ_P0030740 Tmigd1 protein_coding protein_coding MGP_LPJ_T0030741.1 MGP_LPJ_G0018643.1 mouse_genomes_project 11 78370740 78382899 + MGP_LPJ_P0030741 Tmigd1 protein_coding protein_coding MGP_LPJ_T0030742.1 MGP_LPJ_G0018643.1 mouse_genomes_project 11 78370757 78382410 + Tmigd1 protein_coding processed_transcript MGP_LPJ_T0029450.1 MGP_LPJ_G0018347.1 mouse_genomes_project 11 61977544 61983209 - MGP_LPJ_P0029450 Rnf112 protein_coding protein_coding MGP_LPJ_T0029451.1 MGP_LPJ_G0018347.1 mouse_genomes_project 11 61977544 61983389 - MGP_LPJ_P0029451 Rnf112 protein_coding unknown_likely_coding MGP_LPJ_T0029452.1 MGP_LPJ_G0018347.1 mouse_genomes_project 11 61977545 61983108 - MGP_LPJ_P0029452 Rnf112 protein_coding protein_coding MGP_LPJ_T0029453.1 MGP_LPJ_G0018347.1 mouse_genomes_project 11 61981148 61983234 - Rnf112 protein_coding processed_transcript MGP_LPJ_T0029454.1 MGP_LPJ_G0018347.1 mouse_genomes_project 11 61981366 61983022 - Rnf112 protein_coding processed_transcript MGP_LPJ_T0029455.1 MGP_LPJ_G0018347.1 mouse_genomes_project 11 61981838 61983045 - Rnf112 protein_coding processed_transcript MGP_LPJ_T0029456.1 MGP_LPJ_G0018347.1 mouse_genomes_project 11 61982019 61983036 - Rnf112 protein_coding processed_transcript MGP_LPJ_T0029870.1 MGP_LPJ_G0018436.1 mouse_genomes_project 11 70390381 70394323 - protein_coding processed_transcript MGP_LPJ_T0029871.1 MGP_LPJ_G0018436.1 mouse_genomes_project 11 70391718 70394025 - MGP_LPJ_P0029871 protein_coding protein_coding MGP_LPJ_T0029872.1 MGP_LPJ_G0018436.1 mouse_genomes_project 11 70392071 70394025 - MGP_LPJ_P0029872 protein_coding protein_coding MGP_LPJ_T0032198.1 MGP_LPJ_G0019032.1 mouse_genomes_project 11 103196282 103197359 + MGP_LPJ_P0032198 Krtap9-5 protein_coding protein_coding MGP_LPJ_T0003159.1 MGP_LPJ_G0002932.1 mouse_genomes_project 11 32280294 32282309 + Gm12119 antisense antisense MGP_LPJ_T0029308.1 MGP_LPJ_G0018318.1 mouse_genomes_project 11 60409023 60423025 + MGP_LPJ_P0029308 Med9 protein_coding protein_coding MGP_LPJ_T0101788.1 MGP_LPJ_G0039826.1 mouse_genomes_project 11 102842862 102843072 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0012757.1 MGP_LPJ_G0010848.1 mouse_genomes_project 11 112631915 112632339 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003331.1 MGP_LPJ_G0003074.1 mouse_genomes_project 11 107862037 107870478 - Gm11659 antisense antisense MGP_LPJ_T0028998.1 MGP_LPJ_G0018218.1 mouse_genomes_project 11 53841520 53884517 - MGP_LPJ_P0028998 Slc22a21 protein_coding protein_coding MGP_LPJ_T0028999.1 MGP_LPJ_G0018218.1 mouse_genomes_project 11 53849097 53884055 - MGP_LPJ_P0028999 Slc22a21 protein_coding nonsense_mediated_decay MGP_LPJ_T0029000.1 MGP_LPJ_G0018218.1 mouse_genomes_project 11 53849189 53873789 - MGP_LPJ_P0029000 Slc22a21 protein_coding nonsense_mediated_decay MGP_LPJ_T0031601.1 MGP_LPJ_G0018856.1 mouse_genomes_project 11 96901628 96905660 + MGP_LPJ_P0031601 protein_coding unknown_likely_coding MGP_LPJ_T0031602.1 MGP_LPJ_G0018856.1 mouse_genomes_project 11 96901661 96905660 + MGP_LPJ_P0031602 protein_coding unknown_likely_coding MGP_LPJ_T0031603.1 MGP_LPJ_G0018856.1 mouse_genomes_project 11 96904332 96905660 + MGP_LPJ_P0031603 protein_coding protein_coding MGP_LPJ_T0098397.1 MGP_LPJ_G0036678.1 mouse_genomes_project 11 89053761 89053892 - Gm22387 scaRNA scaRNA MGP_LPJ_T0030581.1 MGP_LPJ_G0018607.1 mouse_genomes_project 11 76488955 76493931 - MGP_LPJ_P0030581 protein_coding protein_coding MGP_LPJ_T0030582.1 MGP_LPJ_G0018607.1 mouse_genomes_project 11 76491543 76492537 - protein_coding processed_transcript MGP_LPJ_T0003327.1 MGP_LPJ_G0003070.1 mouse_genomes_project 11 106758270 106760455 - Gm20511 antisense antisense MGP_LPJ_T0032753.1 MGP_LPJ_G0019155.1 mouse_genomes_project 11 106634520 106658424 - MGP_LPJ_P0032753 Plcd3 protein_coding protein_coding MGP_LPJ_T0032754.1 MGP_LPJ_G0019155.1 mouse_genomes_project 11 106634520 106642511 - MGP_LPJ_P0032754 Plcd3 protein_coding protein_coding MGP_LPJ_T0032755.1 MGP_LPJ_G0019155.1 mouse_genomes_project 11 106634801 106635967 - Plcd3 protein_coding processed_transcript MGP_LPJ_T0032756.1 MGP_LPJ_G0019155.1 mouse_genomes_project 11 106644770 106658384 - Plcd3 protein_coding processed_transcript MGP_LPJ_T0032757.1 MGP_LPJ_G0019155.1 mouse_genomes_project 11 106645945 106658357 - Plcd3 protein_coding processed_transcript MGP_LPJ_T0101781.1 MGP_LPJ_G0039819.1 mouse_genomes_project 11 85609183 85609327 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0031017.1 MGP_LPJ_G0018704.1 mouse_genomes_project 11 81212901 81326789 + MGP_LPJ_P0031017 Rab11fip4 protein_coding protein_coding MGP_LPJ_T0031018.1 MGP_LPJ_G0018704.1 mouse_genomes_project 11 81289002 81311678 + MGP_LPJ_P0031018 Rab11fip4 protein_coding protein_coding MGP_LPJ_T0012491.1 MGP_LPJ_G0010582.1 mouse_genomes_project 11 15184567 15185249 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006304.1 MGP_LPJ_G0005266.1 mouse_genomes_project 11 81334416 81335207 + Gm11205 lincRNA lincRNA MGP_LPJ_T0006228.1 MGP_LPJ_G0005201.1 mouse_genomes_project 11 30190299 30229617 - D630024D03Rik lincRNA lincRNA MGP_LPJ_T0006229.1 MGP_LPJ_G0005201.1 mouse_genomes_project 11 30201163 30229668 - D630024D03Rik lincRNA lincRNA MGP_LPJ_T0006230.1 MGP_LPJ_G0005201.1 mouse_genomes_project 11 30223222 30229617 - D630024D03Rik lincRNA lincRNA MGP_LPJ_T0033855.1 MGP_LPJ_G0019386.1 mouse_genomes_project 11 124105493 124210587 + MGP_LPJ_P0033855 Rnf213 protein_coding protein_coding MGP_LPJ_T0033856.1 MGP_LPJ_G0019386.1 mouse_genomes_project 11 124105493 124209328 + MGP_LPJ_P0033856 Rnf213 protein_coding unknown_likely_coding MGP_LPJ_T0033857.1 MGP_LPJ_G0019386.1 mouse_genomes_project 11 124105493 124210584 + MGP_LPJ_P0033857 Rnf213 protein_coding protein_coding MGP_LPJ_T0033858.1 MGP_LPJ_G0019386.1 mouse_genomes_project 11 124201227 124210586 + MGP_LPJ_P0033858 Rnf213 protein_coding protein_coding MGP_LPJ_T0100130.1 MGP_LPJ_G0038393.1 mouse_genomes_project 11 18993846 18993985 - Gm23582 snoRNA snoRNA MGP_LPJ_T0012607.1 MGP_LPJ_G0010698.1 mouse_genomes_project 11 55458140 55458310 - processed_pseudogene processed_pseudogene MGP_LPJ_T0028212.1 MGP_LPJ_G0018004.1 mouse_genomes_project 11 21936726 21964057 - MGP_LPJ_P0028212 A830031A19Rik protein_coding protein_coding MGP_LPJ_T0031469.1 MGP_LPJ_G0018821.1 mouse_genomes_project 11 90087332 90088416 - MGP_LPJ_P0031469 Olfr464 protein_coding protein_coding MGP_LPJ_T0031470.1 MGP_LPJ_G0018821.1 mouse_genomes_project 11 90087977 90089916 - MGP_LPJ_P0031470 Olfr464 protein_coding protein_coding MGP_LPJ_T0028826.1 MGP_LPJ_G0018173.1 mouse_genomes_project 11 50659818 50660631 + Zfp354a protein_coding processed_transcript MGP_LPJ_T0028827.1 MGP_LPJ_G0018173.1 mouse_genomes_project 11 50659870 50672547 + MGP_LPJ_P0028827 Zfp354a protein_coding protein_coding MGP_LPJ_T0028828.1 MGP_LPJ_G0018173.1 mouse_genomes_project 11 50660374 50672026 + MGP_LPJ_P0028828 Zfp354a protein_coding protein_coding MGP_LPJ_T0028829.1 MGP_LPJ_G0018173.1 mouse_genomes_project 11 50660606 50672006 + MGP_LPJ_P0028829 Zfp354a protein_coding protein_coding MGP_LPJ_T0017195.1 MGP_LPJ_G0015121.1 mouse_genomes_project 11 103650196 103651363 - Gm20394 processed_transcript processed_transcript MGP_LPJ_T0032071.1 MGP_LPJ_G0018973.1 mouse_genomes_project 11 101753613 101756026 + MGP_LPJ_P0032071 Csf3 protein_coding protein_coding MGP_LPJ_T0032223.1 MGP_LPJ_G0019049.1 mouse_genomes_project 11 103558568 103561657 - Krt42 protein_coding retained_intron MGP_LPJ_T0032224.1 MGP_LPJ_G0019049.1 mouse_genomes_project 11 103558573 103565549 - MGP_LPJ_P0032224 Krt42 protein_coding protein_coding MGP_LPJ_T0033078.1 MGP_LPJ_G0019228.1 mouse_genomes_project 11 112240988 112300106 + MGP_LPJ_P0033078 Apoh protein_coding protein_coding MGP_LPJ_T0033079.1 MGP_LPJ_G0019228.1 mouse_genomes_project 11 112284078 112300051 + MGP_LPJ_P0033079 Apoh protein_coding protein_coding MGP_LPJ_T0033080.1 MGP_LPJ_G0019228.1 mouse_genomes_project 11 112284083 112309736 + MGP_LPJ_P0033080 Apoh protein_coding protein_coding MGP_LPJ_T0033081.1 MGP_LPJ_G0019228.1 mouse_genomes_project 11 112299493 112316256 + MGP_LPJ_P0033081 Apoh protein_coding protein_coding MGP_LPJ_T0034078.1 MGP_LPJ_G0019426.1 mouse_genomes_project 11 125496892 125497934 - protein_coding processed_transcript MGP_LPJ_T0034079.1 MGP_LPJ_G0019426.1 mouse_genomes_project 11 125496892 125499687 - MGP_LPJ_P0034079 protein_coding protein_coding MGP_LPJ_T0034080.1 MGP_LPJ_G0019426.1 mouse_genomes_project 11 125496892 125499681 - MGP_LPJ_P0034080 protein_coding protein_coding MGP_LPJ_T0034081.1 MGP_LPJ_G0019426.1 mouse_genomes_project 11 125496892 125499681 - MGP_LPJ_P0034081 protein_coding protein_coding MGP_LPJ_T0034082.1 MGP_LPJ_G0019426.1 mouse_genomes_project 11 125496893 125499687 - MGP_LPJ_P0034082 protein_coding protein_coding MGP_LPJ_T0030615.1 MGP_LPJ_G0018616.1 mouse_genomes_project 11 76798357 76806296 + Tlcd2 protein_coding processed_transcript MGP_LPJ_T0030616.1 MGP_LPJ_G0018616.1 mouse_genomes_project 11 76804711 76806990 + MGP_LPJ_P0030616 Tlcd2 protein_coding protein_coding MGP_LPJ_T0030617.1 MGP_LPJ_G0018616.1 mouse_genomes_project 11 76804711 76807232 + MGP_LPJ_P0030617 Tlcd2 protein_coding protein_coding MGP_LPJ_T0030618.1 MGP_LPJ_G0018616.1 mouse_genomes_project 11 76805343 76806756 + Tlcd2 protein_coding retained_intron MGP_LPJ_T0031029.1 MGP_LPJ_G0018707.1 mouse_genomes_project 11 81707378 81742247 - MGP_LPJ_P0031029 Crlf3 protein_coding protein_coding MGP_LPJ_T0031030.1 MGP_LPJ_G0018707.1 mouse_genomes_project 11 81708369 81742264 - MGP_LPJ_P0031030 Crlf3 protein_coding nonsense_mediated_decay MGP_LPJ_T0031031.1 MGP_LPJ_G0018707.1 mouse_genomes_project 11 81708369 81742247 - MGP_LPJ_P0031031 Crlf3 protein_coding nonsense_mediated_decay MGP_LPJ_T0031032.1 MGP_LPJ_G0018707.1 mouse_genomes_project 11 81716988 81742271 - Crlf3 protein_coding processed_transcript MGP_LPJ_T0031033.1 MGP_LPJ_G0018707.1 mouse_genomes_project 11 81717110 81718793 - Crlf3 protein_coding retained_intron MGP_LPJ_T0031034.1 MGP_LPJ_G0018707.1 mouse_genomes_project 11 81720205 81742196 - MGP_LPJ_P0031034 Crlf3 protein_coding nonsense_mediated_decay MGP_LPJ_T0031035.1 MGP_LPJ_G0018707.1 mouse_genomes_project 11 81723644 81742273 - Crlf3 protein_coding retained_intron MGP_LPJ_T0029355.1 MGP_LPJ_G0018325.1 mouse_genomes_project 11 60881744 60899823 - MGP_LPJ_P0029355 Atpaf2 protein_coding protein_coding MGP_LPJ_T0029356.1 MGP_LPJ_G0018325.1 mouse_genomes_project 11 60882597 60899790 - MGP_LPJ_P0029356 Atpaf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0029357.1 MGP_LPJ_G0018325.1 mouse_genomes_project 11 60884961 60899814 - Atpaf2 protein_coding processed_transcript MGP_LPJ_T0029358.1 MGP_LPJ_G0018325.1 mouse_genomes_project 11 60886918 60899807 - Atpaf2 protein_coding processed_transcript MGP_LPJ_T0029359.1 MGP_LPJ_G0018325.1 mouse_genomes_project 11 60888497 60901235 - Atpaf2 protein_coding processed_transcript MGP_LPJ_T0029360.1 MGP_LPJ_G0018325.1 mouse_genomes_project 11 60890335 60899808 - Atpaf2 protein_coding retained_intron MGP_LPJ_T0032383.1 MGP_LPJ_G0019085.1 mouse_genomes_project 11 104537307 104545606 - MGP_LPJ_P0032383 Plekhh3 protein_coding nonsense_mediated_decay MGP_LPJ_T0032384.1 MGP_LPJ_G0019085.1 mouse_genomes_project 11 104537307 104546002 - MGP_LPJ_P0032384 Plekhh3 protein_coding protein_coding MGP_LPJ_T0032385.1 MGP_LPJ_G0019085.1 mouse_genomes_project 11 104537307 104540249 - MGP_LPJ_P0032385 Plekhh3 protein_coding nonsense_mediated_decay MGP_LPJ_T0032386.1 MGP_LPJ_G0019085.1 mouse_genomes_project 11 104537310 104545968 - MGP_LPJ_P0032386 Plekhh3 protein_coding protein_coding MGP_LPJ_T0032387.1 MGP_LPJ_G0019085.1 mouse_genomes_project 11 104538795 104539953 - Plekhh3 protein_coding processed_transcript MGP_LPJ_T0032388.1 MGP_LPJ_G0019085.1 mouse_genomes_project 11 104542122 104545005 - MGP_LPJ_P0032388 Plekhh3 protein_coding protein_coding MGP_LPJ_T0032780.1 MGP_LPJ_G0019159.1 mouse_genomes_project 11 106738691 106766430 + MGP_LPJ_P0032780 Fmnl1 protein_coding protein_coding MGP_LPJ_T0032781.1 MGP_LPJ_G0019159.1 mouse_genomes_project 11 106738897 106766424 + MGP_LPJ_P0032781 Fmnl1 protein_coding protein_coding MGP_LPJ_T0032782.1 MGP_LPJ_G0019159.1 mouse_genomes_project 11 106738897 106766437 + MGP_LPJ_P0032782 Fmnl1 protein_coding unknown_likely_coding MGP_LPJ_T0032783.1 MGP_LPJ_G0019159.1 mouse_genomes_project 11 106748332 106757929 + Fmnl1 protein_coding processed_transcript MGP_LPJ_T0032784.1 MGP_LPJ_G0019159.1 mouse_genomes_project 11 106752790 106758219 + Fmnl1 protein_coding processed_transcript MGP_LPJ_T0032785.1 MGP_LPJ_G0019159.1 mouse_genomes_project 11 106759870 106766424 + Fmnl1 protein_coding retained_intron MGP_LPJ_T0032786.1 MGP_LPJ_G0019159.1 mouse_genomes_project 11 106764359 106765435 + MGP_LPJ_P0032786 Fmnl1 protein_coding protein_coding MGP_LPJ_T0003325.1 MGP_LPJ_G0003068.1 mouse_genomes_project 11 105615261 105615947 - Gm11586 antisense antisense MGP_LPJ_T0012515.1 MGP_LPJ_G0010606.1 mouse_genomes_project 11 19677174 19678118 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100142.1 MGP_LPJ_G0038405.1 mouse_genomes_project 11 48072005 48072072 + Gm25296 snoRNA snoRNA MGP_LPJ_T0029687.1 MGP_LPJ_G0018396.1 mouse_genomes_project 11 68125104 68158056 + MGP_LPJ_P0029687 Myh8 protein_coding protein_coding MGP_LPJ_T0029688.1 MGP_LPJ_G0018396.1 mouse_genomes_project 11 68125398 68143405 + Myh8 protein_coding retained_intron MGP_LPJ_T0029689.1 MGP_LPJ_G0018396.1 mouse_genomes_project 11 68125398 68130139 + MGP_LPJ_P0029689 Myh8 protein_coding protein_coding MGP_LPJ_T0029690.1 MGP_LPJ_G0018396.1 mouse_genomes_project 11 68127967 68140338 + Myh8 protein_coding retained_intron MGP_LPJ_T0029736.1 MGP_LPJ_G0018408.1 mouse_genomes_project 11 69423894 69474949 + MGP_LPJ_P0029736 Pik3r6 protein_coding protein_coding MGP_LPJ_T0029737.1 MGP_LPJ_G0018408.1 mouse_genomes_project 11 69423894 69474949 + MGP_LPJ_P0029737 Pik3r6 protein_coding protein_coding MGP_LPJ_T0029738.1 MGP_LPJ_G0018408.1 mouse_genomes_project 11 69423966 69474949 + Pik3r6 protein_coding processed_transcript MGP_LPJ_T0029739.1 MGP_LPJ_G0018408.1 mouse_genomes_project 11 69458309 69466501 + Pik3r6 protein_coding processed_transcript MGP_LPJ_T0029740.1 MGP_LPJ_G0018408.1 mouse_genomes_project 11 69474314 69474947 + Pik3r6 protein_coding processed_transcript MGP_LPJ_T0028708.1 MGP_LPJ_G0018137.1 mouse_genomes_project 11 48875223 48876159 + MGP_LPJ_P0028708 Olfr1387 protein_coding protein_coding MGP_LPJ_T0031424.1 MGP_LPJ_G0018810.1 mouse_genomes_project 11 89710363 89734479 + MGP_LPJ_P0031424 Mtmr4 protein_coding protein_coding MGP_LPJ_T0031425.1 MGP_LPJ_G0018810.1 mouse_genomes_project 11 89710420 89734479 + MGP_LPJ_P0031425 Mtmr4 protein_coding protein_coding MGP_LPJ_T0031426.1 MGP_LPJ_G0018810.1 mouse_genomes_project 11 89710427 89717149 + MGP_LPJ_P0031426 Mtmr4 protein_coding protein_coding MGP_LPJ_T0031427.1 MGP_LPJ_G0018810.1 mouse_genomes_project 11 89710665 89715935 + MGP_LPJ_P0031427 Mtmr4 protein_coding protein_coding MGP_LPJ_T0031428.1 MGP_LPJ_G0018810.1 mouse_genomes_project 11 89711098 89733349 + MGP_LPJ_P0031428 Mtmr4 protein_coding protein_coding MGP_LPJ_T0031429.1 MGP_LPJ_G0018810.1 mouse_genomes_project 11 89713853 89719281 + MGP_LPJ_P0031429 Mtmr4 protein_coding protein_coding MGP_LPJ_T0028822.1 MGP_LPJ_G0018169.1 mouse_genomes_project 11 50561354 50562417 + MGP_LPJ_P0028822 Olfr1377 protein_coding protein_coding MGP_LPJ_T0031236.1 MGP_LPJ_G0018769.1 mouse_genomes_project 11 86010766 86063076 - MGP_LPJ_P0031236 Tada2a protein_coding protein_coding MGP_LPJ_T0031237.1 MGP_LPJ_G0018769.1 mouse_genomes_project 11 86011378 86014799 - Tada2a protein_coding processed_transcript MGP_LPJ_T0031238.1 MGP_LPJ_G0018769.1 mouse_genomes_project 11 86011479 86025656 - MGP_LPJ_P0031238 Tada2a protein_coding protein_coding MGP_LPJ_T0031239.1 MGP_LPJ_G0018769.1 mouse_genomes_project 11 86013880 86019297 - Tada2a protein_coding processed_transcript MGP_LPJ_T0031240.1 MGP_LPJ_G0018769.1 mouse_genomes_project 11 86017268 86019349 - Tada2a protein_coding processed_transcript MGP_LPJ_T0012559.1 MGP_LPJ_G0010650.1 mouse_genomes_project 11 36953235 36954386 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009770.1 MGP_LPJ_G0007888.1 mouse_genomes_project 11 109301132 109301251 + Gm23990 miRNA miRNA MGP_LPJ_T0031681.1 MGP_LPJ_G0018872.1 mouse_genomes_project 11 97400301 97403862 + MGP_LPJ_P0031681 Cdc34b protein_coding protein_coding MGP_LPJ_T0031682.1 MGP_LPJ_G0018872.1 mouse_genomes_project 11 97400301 97403886 + MGP_LPJ_P0031682 Cdc34b protein_coding protein_coding MGP_LPJ_T0006266.1 MGP_LPJ_G0005235.1 mouse_genomes_project 11 60381454 60381845 + 1810063I02Rik lincRNA lincRNA MGP_LPJ_T0031666.1 MGP_LPJ_G0018868.1 mouse_genomes_project 11 97295343 97304036 - MGP_LPJ_P0031666 Eme1 protein_coding protein_coding MGP_LPJ_T0031667.1 MGP_LPJ_G0018868.1 mouse_genomes_project 11 97298079 97300876 - Eme1 protein_coding processed_transcript MGP_LPJ_T0031668.1 MGP_LPJ_G0018868.1 mouse_genomes_project 11 97300239 97301051 - Eme1 protein_coding processed_transcript MGP_LPJ_T0031669.1 MGP_LPJ_G0018868.1 mouse_genomes_project 11 97300920 97303743 - Eme1 protein_coding processed_transcript MGP_LPJ_T0028398.1 MGP_LPJ_G0018044.1 mouse_genomes_project 11 30824708 30914852 + MGP_LPJ_P0028398 Sh3pxd2b protein_coding protein_coding MGP_LPJ_T0028399.1 MGP_LPJ_G0018044.1 mouse_genomes_project 11 30824728 30871316 + Sh3pxd2b protein_coding retained_intron MGP_LPJ_T0028400.1 MGP_LPJ_G0018044.1 mouse_genomes_project 11 30824755 30910231 + MGP_LPJ_P0028400 Sh3pxd2b protein_coding unknown_likely_coding MGP_LPJ_T0029320.1 MGP_LPJ_G0018321.1 mouse_genomes_project 11 60575271 60671699 + Rai1 protein_coding processed_transcript MGP_LPJ_T0029321.1 MGP_LPJ_G0018321.1 mouse_genomes_project 11 60575271 60671697 + MGP_LPJ_P0029321 Rai1 protein_coding protein_coding MGP_LPJ_T0029322.1 MGP_LPJ_G0018321.1 mouse_genomes_project 11 60575435 60657932 + MGP_LPJ_P0029322 Rai1 protein_coding protein_coding MGP_LPJ_T0029323.1 MGP_LPJ_G0018321.1 mouse_genomes_project 11 60610276 60671697 + MGP_LPJ_P0029323 Rai1 protein_coding protein_coding MGP_LPJ_T0029324.1 MGP_LPJ_G0018321.1 mouse_genomes_project 11 60610278 60664526 + MGP_LPJ_P0029324 Rai1 protein_coding protein_coding MGP_LPJ_T0029325.1 MGP_LPJ_G0018321.1 mouse_genomes_project 11 60610453 60611398 + Rai1 protein_coding processed_transcript MGP_LPJ_T0029326.1 MGP_LPJ_G0018321.1 mouse_genomes_project 11 60648385 60671699 + MGP_LPJ_P0029326 Rai1 protein_coding protein_coding MGP_LPJ_T0032512.1 MGP_LPJ_G0019111.1 mouse_genomes_project 11 105099458 105101751 + MGP_LPJ_P0032512 Arl4d protein_coding protein_coding MGP_LPJ_T0030368.1 MGP_LPJ_G0018538.1 mouse_genomes_project 11 73337458 73341323 - MGP_LPJ_P0030368 Med31 protein_coding protein_coding MGP_LPJ_T0030369.1 MGP_LPJ_G0018538.1 mouse_genomes_project 11 73338966 73340796 - Med31 protein_coding retained_intron MGP_LPJ_T0032860.1 MGP_LPJ_G0019178.1 mouse_genomes_project 11 108185999 108225263 + MGP_LPJ_P0032860 Myl4 protein_coding protein_coding MGP_LPJ_T0032862.1 MGP_LPJ_G0019178.1 mouse_genomes_project 11 108213452 108223795 + MGP_LPJ_P0032862 Myl4 protein_coding protein_coding MGP_LPJ_T0032863.1 MGP_LPJ_G0019178.1 mouse_genomes_project 11 108214972 108225263 + MGP_LPJ_P0032863 Myl4 protein_coding protein_coding MGP_LPJ_T0032864.1 MGP_LPJ_G0019178.1 mouse_genomes_project 11 108215004 108223061 + MGP_LPJ_P0032864 Myl4 protein_coding nonsense_mediated_decay MGP_LPJ_T0032865.1 MGP_LPJ_G0019178.1 mouse_genomes_project 11 108215268 108225263 + MGP_LPJ_P0032865 Myl4 protein_coding protein_coding MGP_LPJ_T0032866.1 MGP_LPJ_G0019178.1 mouse_genomes_project 11 108218315 108225257 + Myl4 protein_coding retained_intron MGP_LPJ_T0032867.1 MGP_LPJ_G0019178.1 mouse_genomes_project 11 108220028 108224394 + Myl4 protein_coding retained_intron MGP_LPJ_T0032868.1 MGP_LPJ_G0019178.1 mouse_genomes_project 11 108223010 108233801 + MGP_LPJ_P0032868 Myl4 protein_coding protein_coding MGP_LPJ_T0006312.1 MGP_LPJ_G0005270.1 mouse_genomes_project 11 84421298 84424255 + Gm11426 lincRNA lincRNA MGP_LPJ_T0012609.1 MGP_LPJ_G0010700.1 mouse_genomes_project 11 56306653 56306882 - processed_pseudogene processed_pseudogene MGP_LPJ_T0031739.1 MGP_LPJ_G0018887.1 mouse_genomes_project 11 98183452 98268408 + MGP_LPJ_P0031739 Spop protein_coding protein_coding MGP_LPJ_T0031740.1 MGP_LPJ_G0018887.1 mouse_genomes_project 11 98183456 98268408 + MGP_LPJ_P0031740 Spop protein_coding protein_coding MGP_LPJ_T0031741.1 MGP_LPJ_G0018887.1 mouse_genomes_project 11 98183456 98249080 + MGP_LPJ_P0031741 Spop protein_coding protein_coding MGP_LPJ_T0031742.1 MGP_LPJ_G0018887.1 mouse_genomes_project 11 98183525 98249101 + MGP_LPJ_P0031742 Spop protein_coding protein_coding MGP_LPJ_T0031743.1 MGP_LPJ_G0018887.1 mouse_genomes_project 11 98249084 98265317 + Spop protein_coding processed_transcript MGP_LPJ_T0003277.1 MGP_LPJ_G0003031.1 mouse_genomes_project 11 90590920 90598614 + Gm15893 antisense antisense MGP_LPJ_T0029219.1 MGP_LPJ_G0018294.1 mouse_genomes_project 11 59361519 59369224 + MGP_LPJ_P0029219 Trim17 protein_coding protein_coding MGP_LPJ_T0030884.1 MGP_LPJ_G0018670.1 mouse_genomes_project 11 79698301 79700447 - Rpl23a protein_coding retained_intron MGP_LPJ_T0030885.1 MGP_LPJ_G0018670.1 mouse_genomes_project 11 79698304 79699000 - Rpl23a protein_coding retained_intron MGP_LPJ_T0030886.1 MGP_LPJ_G0018670.1 mouse_genomes_project 11 79698304 79700954 - MGP_LPJ_P0030886 Rpl23a protein_coding protein_coding MGP_LPJ_T0032278.1 MGP_LPJ_G0019062.1 mouse_genomes_project 11 103908230 103910199 - Dnajc7 protein_coding processed_transcript MGP_LPJ_T0032279.1 MGP_LPJ_G0019062.1 mouse_genomes_project 11 103908230 103948468 - MGP_LPJ_P0032279 Dnajc7 protein_coding protein_coding MGP_LPJ_T0032280.1 MGP_LPJ_G0019062.1 mouse_genomes_project 11 103908676 103910905 - Dnajc7 protein_coding processed_transcript MGP_LPJ_T0032281.1 MGP_LPJ_G0019062.1 mouse_genomes_project 11 103909752 103916377 - Dnajc7 protein_coding processed_transcript MGP_LPJ_T0032282.1 MGP_LPJ_G0019062.1 mouse_genomes_project 11 103916235 103947877 - MGP_LPJ_P0032282 Dnajc7 protein_coding protein_coding MGP_LPJ_T0032283.1 MGP_LPJ_G0019062.1 mouse_genomes_project 11 103916242 103947898 - Dnajc7 protein_coding processed_transcript MGP_LPJ_T0032284.1 MGP_LPJ_G0019062.1 mouse_genomes_project 11 103916367 103922062 - Dnajc7 protein_coding processed_transcript MGP_LPJ_T0032285.1 MGP_LPJ_G0019062.1 mouse_genomes_project 11 103918312 103940400 - MGP_LPJ_P0032285 Dnajc7 protein_coding protein_coding MGP_LPJ_T0032286.1 MGP_LPJ_G0019062.1 mouse_genomes_project 11 103922780 103947880 - Dnajc7 protein_coding processed_transcript MGP_LPJ_T0032287.1 MGP_LPJ_G0019062.1 mouse_genomes_project 11 103923689 103947960 - Dnajc7 protein_coding processed_transcript MGP_LPJ_T0003256.1 MGP_LPJ_G0003016.1 mouse_genomes_project 11 81298814 81303428 - Rab11fip4os2 antisense antisense MGP_LPJ_T0003257.1 MGP_LPJ_G0003016.1 mouse_genomes_project 11 81302211 81303473 - Rab11fip4os2 antisense antisense MGP_LPJ_T0012705.1 MGP_LPJ_G0010796.1 mouse_genomes_project 11 90678249 90678779 - processed_pseudogene processed_pseudogene MGP_LPJ_T0033487.1 MGP_LPJ_G0019312.1 mouse_genomes_project 11 120484572 120491098 - MGP_LPJ_P0033487 H3f3b protein_coding protein_coding MGP_LPJ_T0033488.1 MGP_LPJ_G0019312.1 mouse_genomes_project 11 120484621 120487769 - MGP_LPJ_P0033488 H3f3b protein_coding protein_coding MGP_LPJ_T0033489.1 MGP_LPJ_G0019312.1 mouse_genomes_project 11 120485852 120487779 - H3f3b protein_coding processed_transcript MGP_LPJ_T0033490.1 MGP_LPJ_G0019312.1 mouse_genomes_project 11 120486202 120487738 - H3f3b protein_coding processed_transcript MGP_LPJ_T0012694.1 MGP_LPJ_G0010785.1 mouse_genomes_project 11 87080700 87081109 - processed_pseudogene processed_pseudogene MGP_LPJ_T0028762.1 MGP_LPJ_G0018153.1 mouse_genomes_project 11 49739986 49741989 - MGP_LPJ_P0028762 protein_coding protein_coding MGP_LPJ_T0028763.1 MGP_LPJ_G0018153.1 mouse_genomes_project 11 49739989 49742050 - MGP_LPJ_P0028763 protein_coding protein_coding MGP_LPJ_T0028764.1 MGP_LPJ_G0018153.1 mouse_genomes_project 11 49739989 49742134 - MGP_LPJ_P0028764 protein_coding protein_coding MGP_LPJ_T0029744.1 MGP_LPJ_G0018411.1 mouse_genomes_project 11 69633332 69641030 + Myh10 protein_coding processed_transcript MGP_LPJ_T0029745.1 MGP_LPJ_G0018411.1 mouse_genomes_project 11 69633688 69766922 + MGP_LPJ_P0029745 Myh10 protein_coding protein_coding MGP_LPJ_T0029746.1 MGP_LPJ_G0018411.1 mouse_genomes_project 11 69633851 69641189 + Myh10 protein_coding processed_transcript MGP_LPJ_T0029747.1 MGP_LPJ_G0018411.1 mouse_genomes_project 11 69633854 69692098 + MGP_LPJ_P0029747 Myh10 protein_coding protein_coding MGP_LPJ_T0029748.1 MGP_LPJ_G0018411.1 mouse_genomes_project 11 69633885 69766902 + MGP_LPJ_P0029748 Myh10 protein_coding protein_coding MGP_LPJ_T0029749.1 MGP_LPJ_G0018411.1 mouse_genomes_project 11 69633927 69715310 + Myh10 protein_coding retained_intron MGP_LPJ_T0029750.1 MGP_LPJ_G0018411.1 mouse_genomes_project 11 69634089 69766914 + MGP_LPJ_P0029750 Myh10 protein_coding protein_coding MGP_LPJ_T0029751.1 MGP_LPJ_G0018411.1 mouse_genomes_project 11 69729077 69735787 + Myh10 protein_coding processed_transcript MGP_LPJ_T0029752.1 MGP_LPJ_G0018411.1 mouse_genomes_project 11 69758872 69760464 + Myh10 protein_coding processed_transcript MGP_LPJ_T0029753.1 MGP_LPJ_G0018411.1 mouse_genomes_project 11 69763770 69766834 + Myh10 protein_coding processed_transcript MGP_LPJ_T0031746.1 MGP_LPJ_G0018890.1 mouse_genomes_project 11 98452213 98466025 + MGP_LPJ_P0031746 Phb protein_coding protein_coding MGP_LPJ_T0031747.1 MGP_LPJ_G0018890.1 mouse_genomes_project 11 98452263 98456906 + Phb protein_coding processed_transcript MGP_LPJ_T0031748.1 MGP_LPJ_G0018890.1 mouse_genomes_project 11 98452273 98453877 + Phb protein_coding processed_transcript MGP_LPJ_T0031749.1 MGP_LPJ_G0018890.1 mouse_genomes_project 11 98452327 98464960 + MGP_LPJ_P0031749 Phb protein_coding protein_coding MGP_LPJ_T0031750.1 MGP_LPJ_G0018890.1 mouse_genomes_project 11 98456713 98461320 + Phb protein_coding processed_transcript MGP_LPJ_T0029252.1 MGP_LPJ_G0018303.1 mouse_genomes_project 11 59667613 59716991 - MGP_LPJ_P0029252 Wnt3a protein_coding protein_coding MGP_LPJ_T0017117.1 MGP_LPJ_G0015076.1 mouse_genomes_project 11 27416961 27419612 - A630052C17Rik processed_transcript processed_transcript MGP_LPJ_T0098957.1 MGP_LPJ_G0037220.1 mouse_genomes_project 11 122814137 122814232 - Gm24060 snRNA snRNA MGP_LPJ_T0003362.1 MGP_LPJ_G0003099.1 mouse_genomes_project 11 120404197 120409853 - Sap30bpos antisense antisense MGP_LPJ_T0006293.1 MGP_LPJ_G0005257.1 mouse_genomes_project 11 72848359 72849429 - Gm12326 lincRNA lincRNA MGP_LPJ_T0006294.1 MGP_LPJ_G0005257.1 mouse_genomes_project 11 72848973 72849410 - Gm12326 lincRNA lincRNA MGP_LPJ_T0028657.1 MGP_LPJ_G0018120.1 mouse_genomes_project 11 48301591 48302428 - MGP_LPJ_P0028657 Psme2b protein_coding protein_coding MGP_LPJ_T0100186.1 MGP_LPJ_G0038449.1 mouse_genomes_project 11 121202681 121202757 + Snord1c snoRNA snoRNA MGP_LPJ_T0012521.1 MGP_LPJ_G0010612.1 mouse_genomes_project 11 21793712 21793971 - processed_pseudogene processed_pseudogene MGP_LPJ_T0028115.1 MGP_LPJ_G0017983.1 mouse_genomes_project 11 19343799 19362052 - MGP_LPJ_P0028115 Mdh1 protein_coding protein_coding MGP_LPJ_T0028116.1 MGP_LPJ_G0017983.1 mouse_genomes_project 11 19346345 19349601 - Mdh1 protein_coding processed_transcript MGP_LPJ_T0028117.1 MGP_LPJ_G0017983.1 mouse_genomes_project 11 19349393 19354080 - Mdh1 protein_coding processed_transcript MGP_LPJ_T0028118.1 MGP_LPJ_G0017983.1 mouse_genomes_project 11 19352767 19362226 - MGP_LPJ_P0028118 Mdh1 protein_coding protein_coding MGP_LPJ_T0031793.1 MGP_LPJ_G0018905.1 mouse_genomes_project 11 99119884 99125023 + MGP_LPJ_P0031793 Hoxb9 protein_coding protein_coding MGP_LPJ_T0031794.1 MGP_LPJ_G0018905.1 mouse_genomes_project 11 99119950 99125023 + MGP_LPJ_P0031794 Hoxb9 protein_coding protein_coding MGP_LPJ_T0031402.1 MGP_LPJ_G0018807.1 mouse_genomes_project 11 89501980 89674680 + MGP_LPJ_P0031402 Tex14 protein_coding protein_coding MGP_LPJ_T0031403.1 MGP_LPJ_G0018807.1 mouse_genomes_project 11 89525879 89595591 + MGP_LPJ_P0031403 Tex14 protein_coding protein_coding MGP_LPJ_T0031404.1 MGP_LPJ_G0018807.1 mouse_genomes_project 11 89652901 89673814 + MGP_LPJ_P0031404 Tex14 protein_coding protein_coding MGP_LPJ_T0031405.1 MGP_LPJ_G0018807.1 mouse_genomes_project 11 89655181 89674676 + MGP_LPJ_P0031405 Tex14 protein_coding protein_coding MGP_LPJ_T0031406.1 MGP_LPJ_G0018807.1 mouse_genomes_project 11 89659195 89674523 + Tex14 protein_coding processed_transcript MGP_LPJ_T0029065.1 MGP_LPJ_G0018230.1 mouse_genomes_project 11 54808597 54812712 + MGP_LPJ_P0029065 Hint1 protein_coding protein_coding MGP_LPJ_T0029066.1 MGP_LPJ_G0018230.1 mouse_genomes_project 11 54808695 54812518 + MGP_LPJ_P0029066 Hint1 protein_coding protein_coding MGP_LPJ_T0033942.1 MGP_LPJ_G0019401.1 mouse_genomes_project 11 125128077 125137757 - Faap100 protein_coding retained_intron MGP_LPJ_T0033943.1 MGP_LPJ_G0019401.1 mouse_genomes_project 11 125128584 125137786 - MGP_LPJ_P0033943 Faap100 protein_coding protein_coding MGP_LPJ_T0033944.1 MGP_LPJ_G0019401.1 mouse_genomes_project 11 125128903 125129911 - Faap100 protein_coding retained_intron MGP_LPJ_T0033945.1 MGP_LPJ_G0019401.1 mouse_genomes_project 11 125131995 125133192 - Faap100 protein_coding processed_transcript MGP_LPJ_T0033946.1 MGP_LPJ_G0019401.1 mouse_genomes_project 11 125132050 125137758 - Faap100 protein_coding retained_intron MGP_LPJ_T0033947.1 MGP_LPJ_G0019401.1 mouse_genomes_project 11 125135191 125137731 - Faap100 protein_coding processed_transcript MGP_LPJ_T0033948.1 MGP_LPJ_G0019401.1 mouse_genomes_project 11 125136007 125137496 - Faap100 protein_coding processed_transcript MGP_LPJ_T0033949.1 MGP_LPJ_G0019401.1 mouse_genomes_project 11 125136344 125137757 - Faap100 protein_coding processed_transcript MGP_LPJ_T0032187.1 MGP_LPJ_G0019021.1 mouse_genomes_project 11 102994307 103024326 + MGP_LPJ_P0032187 Krtap4-9 protein_coding protein_coding MGP_LPJ_T0028617.1 MGP_LPJ_G0018108.1 mouse_genomes_project 11 45828246 45891658 - MGP_LPJ_P0028617 Timd2 protein_coding protein_coding MGP_LPJ_T0028618.1 MGP_LPJ_G0018108.1 mouse_genomes_project 11 45866667 45907424 - MGP_LPJ_P0028618 Timd2 protein_coding protein_coding MGP_LPJ_T0028619.1 MGP_LPJ_G0018108.1 mouse_genomes_project 11 45866667 45900187 - MGP_LPJ_P0028619 Timd2 protein_coding protein_coding MGP_LPJ_T0028620.1 MGP_LPJ_G0018108.1 mouse_genomes_project 11 45888336 45907426 - MGP_LPJ_P0028620 Timd2 protein_coding protein_coding MGP_LPJ_T0006372.1 MGP_LPJ_G0005313.1 mouse_genomes_project 11 117019310 117020367 + 4933434M16Rik lincRNA lincRNA MGP_LPJ_T0006373.1 MGP_LPJ_G0005313.1 mouse_genomes_project 11 117019335 117028110 + 4933434M16Rik lincRNA lincRNA MGP_LPJ_T0003259.1 MGP_LPJ_G0003018.1 mouse_genomes_project 11 82558676 82566596 - 4930507D10Rik antisense antisense MGP_LPJ_T0017098.1 MGP_LPJ_G0015067.1 mouse_genomes_project 11 9035920 9082074 - Gm11999 processed_transcript processed_transcript MGP_LPJ_T0012687.1 MGP_LPJ_G0010778.1 mouse_genomes_project 11 83318332 83319151 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098122.1 MGP_LPJ_G0036403.1 mouse_genomes_project 11 85681488 85681598 - Gm22311 rRNA rRNA MGP_LPJ_T0003258.1 MGP_LPJ_G0003017.1 mouse_genomes_project 11 81821785 81840477 - Adap2os antisense antisense MGP_LPJ_T0006353.1 MGP_LPJ_G0005296.1 mouse_genomes_project 11 100861886 100871053 + Gm11630 lincRNA lincRNA MGP_LPJ_T0098113.1 MGP_LPJ_G0036394.1 mouse_genomes_project 11 20898952 20899052 - Gm23740 rRNA rRNA MGP_LPJ_T0003212.1 MGP_LPJ_G0002979.1 mouse_genomes_project 11 63072554 63091541 + Gm12278 antisense antisense MGP_LPJ_T0033840.1 MGP_LPJ_G0019382.1 mouse_genomes_project 11 123983319 123990264 - MGP_LPJ_P0033840 Gm5580 protein_coding protein_coding MGP_LPJ_T0003386.1 MGP_LPJ_G0003118.1 mouse_genomes_project 11 125627662 125630887 + Gm11773 antisense antisense MGP_LPJ_T0032855.1 MGP_LPJ_G0019177.1 mouse_genomes_project 11 108135729 108185820 - MGP_LPJ_P0032855 Cdc27 protein_coding protein_coding MGP_LPJ_T0032856.1 MGP_LPJ_G0019177.1 mouse_genomes_project 11 108137925 108185729 - MGP_LPJ_P0032856 Cdc27 protein_coding protein_coding MGP_LPJ_T0032857.1 MGP_LPJ_G0019177.1 mouse_genomes_project 11 108141335 108147553 - Cdc27 protein_coding processed_transcript MGP_LPJ_T0032858.1 MGP_LPJ_G0019177.1 mouse_genomes_project 11 108155258 108185815 - MGP_LPJ_P0032858 Cdc27 protein_coding protein_coding MGP_LPJ_T0032859.1 MGP_LPJ_G0019177.1 mouse_genomes_project 11 108167238 108185957 - Cdc27 protein_coding processed_transcript MGP_LPJ_T0098883.1 MGP_LPJ_G0037146.1 mouse_genomes_project 11 2366010 2366117 + Gm25142 snRNA snRNA MGP_LPJ_T0003188.1 MGP_LPJ_G0002959.1 mouse_genomes_project 11 54661017 54667442 + Gm12227 antisense antisense MGP_LPJ_T0006269.1 MGP_LPJ_G0005238.1 mouse_genomes_project 11 62415643 62418365 - A530017D24Rik lincRNA lincRNA MGP_LPJ_T0006270.1 MGP_LPJ_G0005238.1 mouse_genomes_project 11 62416292 62419146 - A530017D24Rik lincRNA lincRNA MGP_LPJ_T0003247.1 MGP_LPJ_G0003007.1 mouse_genomes_project 11 76352324 76355197 - Gm12333 antisense antisense MGP_LPJ_T0028951.1 MGP_LPJ_G0018205.1 mouse_genomes_project 11 53306595 53307326 - MGP_LPJ_P0028951 Gm9837 protein_coding protein_coding MGP_LPJ_T0029024.1 MGP_LPJ_G0018223.1 mouse_genomes_project 11 54184390 54186366 - MGP_LPJ_P0029024 Il3 protein_coding protein_coding MGP_LPJ_T0006201.1 MGP_LPJ_G0005178.1 mouse_genomes_project 11 16657423 16667889 + 4933406G16Rik lincRNA lincRNA MGP_LPJ_T0028437.1 MGP_LPJ_G0018058.1 mouse_genomes_project 11 32567952 32578595 + MGP_LPJ_P0028437 Kcnmb1 protein_coding protein_coding MGP_LPJ_T0028350.1 MGP_LPJ_G0018034.1 mouse_genomes_project 11 30372224 30386294 + MGP_LPJ_P0028350 4930524B15Rik protein_coding protein_coding MGP_LPJ_T0012512.1 MGP_LPJ_G0010603.1 mouse_genomes_project 11 19208160 19208373 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012769.1 MGP_LPJ_G0010860.1 mouse_genomes_project 11 119903902 119904061 + processed_pseudogene processed_pseudogene MGP_LPJ_T0031334.1 MGP_LPJ_G0018790.1 mouse_genomes_project 11 88249000 88296374 - MGP_LPJ_P0031334 Ints2 protein_coding protein_coding MGP_LPJ_T0031335.1 MGP_LPJ_G0018790.1 mouse_genomes_project 11 88250407 88295370 - MGP_LPJ_P0031335 Ints2 protein_coding protein_coding MGP_LPJ_T0031336.1 MGP_LPJ_G0018790.1 mouse_genomes_project 11 88256131 88267394 - MGP_LPJ_P0031336 Ints2 protein_coding nonsense_mediated_decay MGP_LPJ_T0031337.1 MGP_LPJ_G0018790.1 mouse_genomes_project 11 88263082 88270280 - Ints2 protein_coding retained_intron MGP_LPJ_T0031338.1 MGP_LPJ_G0018790.1 mouse_genomes_project 11 88272651 88296365 - Ints2 protein_coding retained_intron MGP_LPJ_T0031339.1 MGP_LPJ_G0018790.1 mouse_genomes_project 11 88273591 88277261 - Ints2 protein_coding retained_intron MGP_LPJ_T0031340.1 MGP_LPJ_G0018790.1 mouse_genomes_project 11 88289406 88296399 - MGP_LPJ_P0031340 Ints2 protein_coding protein_coding MGP_LPJ_T0031341.1 MGP_LPJ_G0018790.1 mouse_genomes_project 11 88294179 88296378 - MGP_LPJ_P0031341 Ints2 protein_coding protein_coding MGP_LPJ_T0031342.1 MGP_LPJ_G0018790.1 mouse_genomes_project 11 88294849 88296342 - MGP_LPJ_P0031342 Ints2 protein_coding protein_coding MGP_LPJ_T0031343.1 MGP_LPJ_G0018790.1 mouse_genomes_project 11 88295176 88296164 - Ints2 protein_coding retained_intron MGP_LPJ_T0031344.1 MGP_LPJ_G0018790.1 mouse_genomes_project 11 88295266 88296389 - Ints2 protein_coding processed_transcript MGP_LPJ_T0003305.1 MGP_LPJ_G0003053.1 mouse_genomes_project 11 101635446 101636229 + antisense antisense MGP_LPJ_T0100139.1 MGP_LPJ_G0038402.1 mouse_genomes_project 11 33812200 33812337 + Gm26070 snoRNA snoRNA MGP_LPJ_T0006393.1 MGP_LPJ_G0005326.1 mouse_genomes_project 11 121993376 121994356 + Gm11729 lincRNA lincRNA MGP_LPJ_T0030751.1 MGP_LPJ_G0018645.1 mouse_genomes_project 11 78465980 78501425 + MGP_LPJ_P0030751 Slc6a4 protein_coding protein_coding MGP_LPJ_T0030752.1 MGP_LPJ_G0018645.1 mouse_genomes_project 11 78465993 78501426 + MGP_LPJ_P0030752 Slc6a4 protein_coding protein_coding MGP_LPJ_T0030753.1 MGP_LPJ_G0018645.1 mouse_genomes_project 11 78476224 78479996 + MGP_LPJ_P0030753 Slc6a4 protein_coding protein_coding MGP_LPJ_T0030754.1 MGP_LPJ_G0018645.1 mouse_genomes_project 11 78485069 78489133 + Slc6a4 protein_coding retained_intron MGP_LPJ_T0012454.1 MGP_LPJ_G0010545.1 mouse_genomes_project 11 1143959 1144429 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003168.1 MGP_LPJ_G0002941.1 mouse_genomes_project 11 43755305 43758441 - Gm12158 antisense antisense MGP_LPJ_T0030949.1 MGP_LPJ_G0018685.1 mouse_genomes_project 11 80032462 80033957 + Vtn protein_coding retained_intron MGP_LPJ_T0030950.1 MGP_LPJ_G0018685.1 mouse_genomes_project 11 80032491 80035696 + MGP_LPJ_P0030950 Vtn protein_coding protein_coding MGP_LPJ_T0030951.1 MGP_LPJ_G0018685.1 mouse_genomes_project 11 80032543 80033616 + Vtn protein_coding retained_intron MGP_LPJ_T0030952.1 MGP_LPJ_G0018685.1 mouse_genomes_project 11 80033977 80035594 + Vtn protein_coding retained_intron MGP_LPJ_T0098914.1 MGP_LPJ_G0037177.1 mouse_genomes_project 11 72152508 72152614 - Gm22297 snRNA snRNA MGP_LPJ_T0012660.1 MGP_LPJ_G0010751.1 mouse_genomes_project 11 74423459 74423678 - processed_pseudogene processed_pseudogene MGP_LPJ_T0028928.1 MGP_LPJ_G0018199.1 mouse_genomes_project 11 53173022 53256825 + MGP_LPJ_P0028928 Aff4 protein_coding protein_coding MGP_LPJ_T0028929.1 MGP_LPJ_G0018199.1 mouse_genomes_project 11 53200894 53206537 + MGP_LPJ_P0028929 Aff4 protein_coding protein_coding MGP_LPJ_T0028930.1 MGP_LPJ_G0018199.1 mouse_genomes_project 11 53201451 53210793 + Aff4 protein_coding retained_intron MGP_LPJ_T0028931.1 MGP_LPJ_G0018199.1 mouse_genomes_project 11 53206596 53210565 + Aff4 protein_coding retained_intron MGP_LPJ_T0028932.1 MGP_LPJ_G0018199.1 mouse_genomes_project 11 53206982 53233643 + MGP_LPJ_P0028932 Aff4 protein_coding protein_coding MGP_LPJ_T0028933.1 MGP_LPJ_G0018199.1 mouse_genomes_project 11 53206990 53234620 + Aff4 protein_coding processed_transcript MGP_LPJ_T0028934.1 MGP_LPJ_G0018199.1 mouse_genomes_project 11 53239541 53244525 + Aff4 protein_coding retained_intron MGP_LPJ_T0028935.1 MGP_LPJ_G0018199.1 mouse_genomes_project 11 53245676 53250828 + Aff4 protein_coding retained_intron MGP_LPJ_T0030796.1 MGP_LPJ_G0018654.1 mouse_genomes_project 11 78985872 78988405 - MGP_LPJ_P0030796 Gm10392 protein_coding protein_coding MGP_LPJ_T0012474.1 MGP_LPJ_G0010565.1 mouse_genomes_project 11 7574326 7575241 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003280.1 MGP_LPJ_G0003034.1 mouse_genomes_project 11 91355235 91359582 + Dgkeos antisense antisense MGP_LPJ_T0003281.1 MGP_LPJ_G0003034.1 mouse_genomes_project 11 91356570 91359582 + Dgkeos antisense antisense MGP_LPJ_T0003282.1 MGP_LPJ_G0003034.1 mouse_genomes_project 11 91356744 91358365 + Dgkeos antisense antisense MGP_LPJ_T0003283.1 MGP_LPJ_G0003034.1 mouse_genomes_project 11 91356748 91358365 + Dgkeos antisense antisense MGP_LPJ_T0032159.1 MGP_LPJ_G0018995.1 mouse_genomes_project 11 102516578 102520701 - MGP_LPJ_P0032159 Krt10 protein_coding protein_coding MGP_LPJ_T0009733.1 MGP_LPJ_G0007851.1 mouse_genomes_project 11 79579491 79579563 - Mir451b miRNA miRNA MGP_LPJ_T0030352.1 MGP_LPJ_G0018534.1 mouse_genomes_project 11 73169167 73261831 - MGP_LPJ_P0030352 Pitpnm3 protein_coding protein_coding MGP_LPJ_T0030353.1 MGP_LPJ_G0018534.1 mouse_genomes_project 11 73169167 73261774 - MGP_LPJ_P0030353 Pitpnm3 protein_coding protein_coding MGP_LPJ_T0030354.1 MGP_LPJ_G0018534.1 mouse_genomes_project 11 73172759 73173700 - Pitpnm3 protein_coding processed_transcript MGP_LPJ_T0030355.1 MGP_LPJ_G0018534.1 mouse_genomes_project 11 73179279 73183186 - Pitpnm3 protein_coding retained_intron MGP_LPJ_T0030356.1 MGP_LPJ_G0018534.1 mouse_genomes_project 11 73191036 73261831 - Pitpnm3 protein_coding retained_intron MGP_LPJ_T0098399.1 MGP_LPJ_G0036680.1 mouse_genomes_project 11 120634571 120634698 - Gm26413 scaRNA scaRNA MGP_LPJ_T0031115.1 MGP_LPJ_G0018732.1 mouse_genomes_project 11 84555563 84557154 + MGP_LPJ_P0031115 Zfp830 protein_coding protein_coding MGP_LPJ_T0029856.1 MGP_LPJ_G0018434.1 mouse_genomes_project 11 70318354 70325135 + MGP_LPJ_P0029856 Kcnab3 protein_coding protein_coding MGP_LPJ_T0029857.1 MGP_LPJ_G0018434.1 mouse_genomes_project 11 70319962 70325135 + Kcnab3 protein_coding retained_intron MGP_LPJ_T0029858.1 MGP_LPJ_G0018434.1 mouse_genomes_project 11 70322420 70324236 + Kcnab3 protein_coding retained_intron MGP_LPJ_T0028471.1 MGP_LPJ_G0018069.1 mouse_genomes_project 11 34650097 35911166 - MGP_LPJ_P0028471 Tenm2 protein_coding protein_coding MGP_LPJ_T0028472.1 MGP_LPJ_G0018069.1 mouse_genomes_project 11 34651095 35623434 - MGP_LPJ_P0028472 Tenm2 protein_coding protein_coding MGP_LPJ_T0028473.1 MGP_LPJ_G0018069.1 mouse_genomes_project 11 34651468 35623434 - MGP_LPJ_P0028473 Tenm2 protein_coding protein_coding MGP_LPJ_T0028474.1 MGP_LPJ_G0018069.1 mouse_genomes_project 11 34792654 35623434 - Tenm2 protein_coding processed_transcript MGP_LPJ_T0028475.1 MGP_LPJ_G0018069.1 mouse_genomes_project 11 34793926 35359043 - Tenm2 protein_coding processed_transcript MGP_LPJ_T0028476.1 MGP_LPJ_G0018069.1 mouse_genomes_project 11 34816728 35173133 - Tenm2 protein_coding processed_transcript MGP_LPJ_T0028477.1 MGP_LPJ_G0018069.1 mouse_genomes_project 11 35051408 35107095 - Tenm2 protein_coding processed_transcript MGP_LPJ_T0028478.1 MGP_LPJ_G0018069.1 mouse_genomes_project 11 35623472 35911248 - Tenm2 protein_coding processed_transcript MGP_LPJ_T0032263.1 MGP_LPJ_G0019059.1 mouse_genomes_project 11 103789799 103843609 - MGP_LPJ_P0032263 Acly protein_coding protein_coding MGP_LPJ_T0032264.1 MGP_LPJ_G0019059.1 mouse_genomes_project 11 103789802 103843609 - MGP_LPJ_P0032264 Acly protein_coding protein_coding MGP_LPJ_T0032265.1 MGP_LPJ_G0019059.1 mouse_genomes_project 11 103789804 103839208 - MGP_LPJ_P0032265 Acly protein_coding protein_coding MGP_LPJ_T0032266.1 MGP_LPJ_G0019059.1 mouse_genomes_project 11 103790672 103792986 - Acly protein_coding processed_transcript MGP_LPJ_T0032267.1 MGP_LPJ_G0019059.1 mouse_genomes_project 11 103795727 103807666 - Acly protein_coding processed_transcript MGP_LPJ_T0032268.1 MGP_LPJ_G0019059.1 mouse_genomes_project 11 103811443 103812294 - Acly protein_coding processed_transcript MGP_LPJ_T0032269.1 MGP_LPJ_G0019059.1 mouse_genomes_project 11 103813774 103843478 - MGP_LPJ_P0032269 Acly protein_coding protein_coding MGP_LPJ_T0012703.1 MGP_LPJ_G0010794.1 mouse_genomes_project 11 90121795 90122207 + processed_pseudogene processed_pseudogene MGP_LPJ_T0029987.1 MGP_LPJ_G0018467.1 mouse_genomes_project 11 70900684 70910450 - MGP_LPJ_P0029987 Tnk1 protein_coding protein_coding MGP_LPJ_T0029988.1 MGP_LPJ_G0018467.1 mouse_genomes_project 11 70900898 70908837 - MGP_LPJ_P0029988 Tnk1 protein_coding protein_coding MGP_LPJ_T0029989.1 MGP_LPJ_G0018467.1 mouse_genomes_project 11 70901754 70907322 - MGP_LPJ_P0029989 Tnk1 protein_coding protein_coding MGP_LPJ_T0029990.1 MGP_LPJ_G0018467.1 mouse_genomes_project 11 70904159 70910450 - MGP_LPJ_P0029990 Tnk1 protein_coding protein_coding MGP_LPJ_T0029991.1 MGP_LPJ_G0018467.1 mouse_genomes_project 11 70907300 70910428 - MGP_LPJ_P0029991 Tnk1 protein_coding protein_coding MGP_LPJ_T0029913.1 MGP_LPJ_G0018449.1 mouse_genomes_project 11 70679272 70686612 - MGP_LPJ_P0029913 Mpdu1 protein_coding protein_coding MGP_LPJ_T0029914.1 MGP_LPJ_G0018449.1 mouse_genomes_project 11 70679536 70686534 - MGP_LPJ_P0029914 Mpdu1 protein_coding protein_coding MGP_LPJ_T0029915.1 MGP_LPJ_G0018449.1 mouse_genomes_project 11 70679602 70686557 - MGP_LPJ_P0029915 Mpdu1 protein_coding nonsense_mediated_decay MGP_LPJ_T0029916.1 MGP_LPJ_G0018449.1 mouse_genomes_project 11 70679704 70680856 - Mpdu1 protein_coding retained_intron MGP_LPJ_T0029917.1 MGP_LPJ_G0018449.1 mouse_genomes_project 11 70679729 70686557 - MGP_LPJ_P0029917 Mpdu1 protein_coding protein_coding MGP_LPJ_T0029918.1 MGP_LPJ_G0018449.1 mouse_genomes_project 11 70679737 70686488 - MGP_LPJ_P0029918 Mpdu1 protein_coding nonsense_mediated_decay MGP_LPJ_T0029919.1 MGP_LPJ_G0018449.1 mouse_genomes_project 11 70679788 70680829 - Mpdu1 protein_coding retained_intron MGP_LPJ_T0029920.1 MGP_LPJ_G0018449.1 mouse_genomes_project 11 70680308 70686474 - Mpdu1 protein_coding retained_intron MGP_LPJ_T0029921.1 MGP_LPJ_G0018449.1 mouse_genomes_project 11 70680922 70686530 - Mpdu1 protein_coding retained_intron MGP_LPJ_T0029922.1 MGP_LPJ_G0018449.1 mouse_genomes_project 11 70681051 70681981 - Mpdu1 protein_coding retained_intron MGP_LPJ_T0028327.1 MGP_LPJ_G0018028.1 mouse_genomes_project 11 29244813 29454908 + MGP_LPJ_P0028327 Asb3 protein_coding protein_coding MGP_LPJ_T0028333.1 MGP_LPJ_G0018028.1 mouse_genomes_project 11 29313814 29456278 + MGP_LPJ_P0028333 Asb3 protein_coding protein_coding MGP_LPJ_T0028334.1 MGP_LPJ_G0018028.1 mouse_genomes_project 11 29313825 29456278 + MGP_LPJ_P0028334 Asb3 protein_coding nonsense_mediated_decay MGP_LPJ_T0028335.1 MGP_LPJ_G0018028.1 mouse_genomes_project 11 29313838 29438908 + MGP_LPJ_P0028335 Asb3 protein_coding protein_coding MGP_LPJ_T0028336.1 MGP_LPJ_G0018028.1 mouse_genomes_project 11 29313867 29388248 + Asb3 protein_coding retained_intron MGP_LPJ_T0028339.1 MGP_LPJ_G0018028.1 mouse_genomes_project 11 29410096 29413343 + Asb3 protein_coding retained_intron MGP_LPJ_T0009703.1 MGP_LPJ_G0007821.1 mouse_genomes_project 11 65295781 65295927 - Gm24275 miRNA miRNA MGP_LPJ_T0028354.1 MGP_LPJ_G0018036.1 mouse_genomes_project 11 30618711 30632771 - MGP_LPJ_P0028354 Il9r protein_coding protein_coding MGP_LPJ_T0028355.1 MGP_LPJ_G0018036.1 mouse_genomes_project 11 30620165 30632828 - MGP_LPJ_P0028355 Il9r protein_coding nonsense_mediated_decay MGP_LPJ_T0028356.1 MGP_LPJ_G0018036.1 mouse_genomes_project 11 30621432 30632785 - MGP_LPJ_P0028356 Il9r protein_coding protein_coding MGP_LPJ_T0028357.1 MGP_LPJ_G0018036.1 mouse_genomes_project 11 30621649 30632771 - MGP_LPJ_P0028357 Il9r protein_coding protein_coding MGP_LPJ_T0028358.1 MGP_LPJ_G0018036.1 mouse_genomes_project 11 30625878 30632828 - Il9r protein_coding retained_intron MGP_LPJ_T0006225.1 MGP_LPJ_G0005198.1 mouse_genomes_project 11 26998642 27065050 + Gm12082 lincRNA lincRNA MGP_LPJ_T0033216.1 MGP_LPJ_G0019258.1 mouse_genomes_project 11 118058010 118350926 - MGP_LPJ_P0033216 Sdk2 protein_coding protein_coding MGP_LPJ_T0033217.1 MGP_LPJ_G0019258.1 mouse_genomes_project 11 118074101 118094132 - Sdk2 protein_coding processed_transcript MGP_LPJ_T0033218.1 MGP_LPJ_G0019258.1 mouse_genomes_project 11 118088854 118113451 - Sdk2 protein_coding processed_transcript MGP_LPJ_T0033219.1 MGP_LPJ_G0019258.1 mouse_genomes_project 11 118135277 118350683 - MGP_LPJ_P0033219 Sdk2 protein_coding protein_coding MGP_LPJ_T0033220.1 MGP_LPJ_G0019258.1 mouse_genomes_project 11 118152305 118351754 - Sdk2 protein_coding processed_transcript MGP_LPJ_T0033221.1 MGP_LPJ_G0019258.1 mouse_genomes_project 11 118223989 118351737 - Sdk2 protein_coding processed_transcript MGP_LPJ_T0032174.1 MGP_LPJ_G0019008.1 mouse_genomes_project 11 102744200 102744968 - MGP_LPJ_P0032174 Krtap9-3 protein_coding protein_coding MGP_LPJ_T0031804.1 MGP_LPJ_G0018910.1 mouse_genomes_project 11 99167467 99170835 + MGP_LPJ_P0031804 Hoxb4 protein_coding protein_coding MGP_LPJ_T0029768.1 MGP_LPJ_G0018416.1 mouse_genomes_project 11 69914533 69926393 - MGP_LPJ_P0029768 Arhgef15 protein_coding protein_coding MGP_LPJ_T0029769.1 MGP_LPJ_G0018416.1 mouse_genomes_project 11 69914535 69928802 - MGP_LPJ_P0029769 Arhgef15 protein_coding protein_coding MGP_LPJ_T0029770.1 MGP_LPJ_G0018416.1 mouse_genomes_project 11 69915903 69918757 - Arhgef15 protein_coding processed_transcript MGP_LPJ_T0029771.1 MGP_LPJ_G0018416.1 mouse_genomes_project 11 69917677 69919140 - Arhgef15 protein_coding processed_transcript MGP_LPJ_T0029772.1 MGP_LPJ_G0018416.1 mouse_genomes_project 11 69917823 69918980 - Arhgef15 protein_coding processed_transcript MGP_LPJ_T0029773.1 MGP_LPJ_G0018416.1 mouse_genomes_project 11 69919550 69923493 - Arhgef15 protein_coding retained_intron MGP_LPJ_T0031548.1 MGP_LPJ_G0018844.1 mouse_genomes_project 11 93000796 93010438 + MGP_LPJ_P0031548 Cox11 protein_coding protein_coding MGP_LPJ_T0031549.1 MGP_LPJ_G0018844.1 mouse_genomes_project 11 93000804 93010817 + MGP_LPJ_P0031549 Cox11 protein_coding protein_coding MGP_LPJ_T0100161.1 MGP_LPJ_G0038424.1 mouse_genomes_project 11 76214533 76214624 + Gm22771 snoRNA snoRNA MGP_LPJ_T0028406.1 MGP_LPJ_G0018048.1 mouse_genomes_project 11 31148420 31255864 + MGP_LPJ_P0028406 Fbxw11 protein_coding protein_coding MGP_LPJ_T0028407.1 MGP_LPJ_G0018048.1 mouse_genomes_project 11 31148480 31160300 + Fbxw11 protein_coding processed_transcript MGP_LPJ_T0028408.1 MGP_LPJ_G0018048.1 mouse_genomes_project 11 31148562 31256084 + MGP_LPJ_P0028408 Fbxw11 protein_coding protein_coding MGP_LPJ_T0028409.1 MGP_LPJ_G0018048.1 mouse_genomes_project 11 31148571 31256111 + MGP_LPJ_P0028409 Fbxw11 protein_coding protein_coding MGP_LPJ_T0028410.1 MGP_LPJ_G0018048.1 mouse_genomes_project 11 31148600 31230992 + MGP_LPJ_P0028410 Fbxw11 protein_coding nonsense_mediated_decay MGP_LPJ_T0009680.1 MGP_LPJ_G0007798.1 mouse_genomes_project 11 34400233 34400319 + Mir103-1 miRNA miRNA MGP_LPJ_T0017203.1 MGP_LPJ_G0015128.1 mouse_genomes_project 11 111271992 111280020 + Gm11714 processed_transcript processed_transcript MGP_LPJ_T0003296.1 MGP_LPJ_G0003045.1 mouse_genomes_project 11 99192082 99203702 - Hoxb3os antisense antisense MGP_LPJ_T0003297.1 MGP_LPJ_G0003045.1 mouse_genomes_project 11 99194491 99196934 - Hoxb3os antisense antisense MGP_LPJ_T0029279.1 MGP_LPJ_G0018313.1 mouse_genomes_project 11 60109132 60176662 + protein_coding processed_transcript MGP_LPJ_T0029280.1 MGP_LPJ_G0018313.1 mouse_genomes_project 11 60110322 60229711 + MGP_LPJ_P0029280 protein_coding protein_coding MGP_LPJ_T0029281.1 MGP_LPJ_G0018313.1 mouse_genomes_project 11 60110334 60229705 + MGP_LPJ_P0029281 protein_coding protein_coding MGP_LPJ_T0029282.1 MGP_LPJ_G0018313.1 mouse_genomes_project 11 60110334 60225074 + MGP_LPJ_P0029282 protein_coding protein_coding MGP_LPJ_T0029283.1 MGP_LPJ_G0018313.1 mouse_genomes_project 11 60110334 60225074 + MGP_LPJ_P0029283 protein_coding protein_coding MGP_LPJ_T0029284.1 MGP_LPJ_G0018313.1 mouse_genomes_project 11 60176657 60225453 + MGP_LPJ_P0029284 protein_coding protein_coding MGP_LPJ_T0029285.1 MGP_LPJ_G0018313.1 mouse_genomes_project 11 60180526 60225074 + MGP_LPJ_P0029285 protein_coding protein_coding MGP_LPJ_T0029286.1 MGP_LPJ_G0018313.1 mouse_genomes_project 11 60189825 60198542 + protein_coding processed_transcript MGP_LPJ_T0029287.1 MGP_LPJ_G0018313.1 mouse_genomes_project 11 60209724 60225074 + MGP_LPJ_P0029287 protein_coding protein_coding MGP_LPJ_T0030466.1 MGP_LPJ_G0018564.1 mouse_genomes_project 11 74466919 74501254 + MGP_LPJ_P0030466 Trpv3 protein_coding protein_coding MGP_LPJ_T0028402.1 MGP_LPJ_G0018046.1 mouse_genomes_project 11 31019892 31025735 - MGP_LPJ_P0028402 Efcab9 protein_coding protein_coding MGP_LPJ_T0028403.1 MGP_LPJ_G0018046.1 mouse_genomes_project 11 31020481 31031027 - MGP_LPJ_P0028403 Efcab9 protein_coding protein_coding MGP_LPJ_T0003242.1 MGP_LPJ_G0003004.1 mouse_genomes_project 11 70709712 70718251 + Tnfsf13os antisense antisense MGP_LPJ_T0003243.1 MGP_LPJ_G0003004.1 mouse_genomes_project 11 70711903 70718628 + Tnfsf13os antisense antisense MGP_LPJ_T0003244.1 MGP_LPJ_G0003004.1 mouse_genomes_project 11 70712075 70718628 + Tnfsf13os antisense antisense MGP_LPJ_T0031523.1 MGP_LPJ_G0018836.1 mouse_genomes_project 11 91601760 91603405 - MGP_LPJ_P0031523 Nog protein_coding protein_coding MGP_LPJ_T0031648.1 MGP_LPJ_G0018863.1 mouse_genomes_project 11 97143087 97164591 - Mycbpap protein_coding retained_intron MGP_LPJ_T0031649.1 MGP_LPJ_G0018863.1 mouse_genomes_project 11 97143087 97145286 - Mycbpap protein_coding processed_transcript MGP_LPJ_T0031650.1 MGP_LPJ_G0018863.1 mouse_genomes_project 11 97143087 97149044 - MGP_LPJ_P0031650 Mycbpap protein_coding protein_coding MGP_LPJ_T0031651.1 MGP_LPJ_G0018863.1 mouse_genomes_project 11 97143087 97164591 - MGP_LPJ_P0031651 Mycbpap protein_coding protein_coding MGP_LPJ_T0031652.1 MGP_LPJ_G0018863.1 mouse_genomes_project 11 97144720 97145273 - Mycbpap protein_coding retained_intron MGP_LPJ_T0031653.1 MGP_LPJ_G0018863.1 mouse_genomes_project 11 97149388 97151862 - Mycbpap protein_coding retained_intron MGP_LPJ_T0012525.1 MGP_LPJ_G0010616.1 mouse_genomes_project 11 24815430 24829971 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098929.1 MGP_LPJ_G0037192.1 mouse_genomes_project 11 87509673 87509820 + Gm23765 snRNA snRNA MGP_LPJ_T0100118.1 MGP_LPJ_G0038381.1 mouse_genomes_project 11 2134138 2134235 + Gm24958 snoRNA snoRNA MGP_LPJ_T0032951.1 MGP_LPJ_G0019201.1 mouse_genomes_project 11 109977494 109984432 - MGP_LPJ_P0032951 Ftsj3 protein_coding protein_coding MGP_LPJ_T0032952.1 MGP_LPJ_G0019201.1 mouse_genomes_project 11 109978251 109979051 - Ftsj3 protein_coding retained_intron MGP_LPJ_T0032953.1 MGP_LPJ_G0019201.1 mouse_genomes_project 11 109979361 109980907 - Ftsj3 protein_coding retained_intron MGP_LPJ_T0032954.1 MGP_LPJ_G0019201.1 mouse_genomes_project 11 109981728 109982348 - Ftsj3 protein_coding retained_intron MGP_LPJ_T0032955.1 MGP_LPJ_G0019201.1 mouse_genomes_project 11 109982644 109984149 - Ftsj3 protein_coding retained_intron MGP_LPJ_T0032956.1 MGP_LPJ_G0019201.1 mouse_genomes_project 11 109983215 109984157 - Ftsj3 protein_coding retained_intron MGP_LPJ_T0030487.1 MGP_LPJ_G0018575.1 mouse_genomes_project 11 74981727 74985929 - MGP_LPJ_P0030487 Olfr389 protein_coding protein_coding MGP_LPJ_T0030488.1 MGP_LPJ_G0018575.1 mouse_genomes_project 11 74981993 74985875 - MGP_LPJ_P0030488 Olfr389 protein_coding protein_coding MGP_LPJ_T0009728.1 MGP_LPJ_G0007846.1 mouse_genomes_project 11 76800358 76800453 + Mir22 miRNA miRNA MGP_LPJ_T0031788.1 MGP_LPJ_G0018902.1 mouse_genomes_project 11 98930716 98945750 - MGP_LPJ_P0031788 Calcoco2 protein_coding protein_coding MGP_LPJ_T0031789.1 MGP_LPJ_G0018902.1 mouse_genomes_project 11 98931304 98945748 - MGP_LPJ_P0031789 Calcoco2 protein_coding protein_coding MGP_LPJ_T0029269.1 MGP_LPJ_G0018309.1 mouse_genomes_project 11 59926848 59943763 - MGP_LPJ_P0029269 Zkscan17 protein_coding protein_coding MGP_LPJ_T0029270.1 MGP_LPJ_G0018309.1 mouse_genomes_project 11 59939527 59946213 - Zkscan17 protein_coding processed_transcript MGP_LPJ_T0029271.1 MGP_LPJ_G0018309.1 mouse_genomes_project 11 59944156 59969410 - Zkscan17 protein_coding processed_transcript MGP_LPJ_T0029272.1 MGP_LPJ_G0018309.1 mouse_genomes_project 11 59944162 59946213 - Zkscan17 protein_coding processed_transcript MGP_LPJ_T0029273.1 MGP_LPJ_G0018309.1 mouse_genomes_project 11 59968230 59969522 - Zkscan17 protein_coding processed_transcript MGP_LPJ_T0028667.1 MGP_LPJ_G0018125.1 mouse_genomes_project 11 48491182 48492163 - MGP_LPJ_P0028667 protein_coding protein_coding MGP_LPJ_T0012463.1 MGP_LPJ_G0010554.1 mouse_genomes_project 11 3644665 3644953 + processed_pseudogene processed_pseudogene MGP_LPJ_T0032458.1 MGP_LPJ_G0019101.1 mouse_genomes_project 11 104823727 104830245 - MGP_LPJ_P0032458 Ptges3l protein_coding protein_coding MGP_LPJ_T0032459.1 MGP_LPJ_G0019101.1 mouse_genomes_project 11 104823727 104829581 - MGP_LPJ_P0032459 Ptges3l protein_coding protein_coding MGP_LPJ_T0032460.1 MGP_LPJ_G0019101.1 mouse_genomes_project 11 104825786 104829581 - MGP_LPJ_P0032460 Ptges3l protein_coding protein_coding MGP_LPJ_T0032461.1 MGP_LPJ_G0019101.1 mouse_genomes_project 11 104826333 104828768 - MGP_LPJ_P0032461 Ptges3l protein_coding protein_coding MGP_LPJ_T0032462.1 MGP_LPJ_G0019101.1 mouse_genomes_project 11 104826743 104829144 - Ptges3l protein_coding retained_intron MGP_LPJ_T0031858.1 MGP_LPJ_G0018920.1 mouse_genomes_project 11 99818339 99819728 + Prr15l protein_coding processed_transcript MGP_LPJ_T0031859.1 MGP_LPJ_G0018920.1 mouse_genomes_project 11 99819537 99827754 + MGP_LPJ_P0031859 Prr15l protein_coding protein_coding MGP_LPJ_T0031860.1 MGP_LPJ_G0018920.1 mouse_genomes_project 11 99819559 99829936 + MGP_LPJ_P0031860 Prr15l protein_coding protein_coding MGP_LPJ_T0031861.1 MGP_LPJ_G0018920.1 mouse_genomes_project 11 99819629 99827749 + MGP_LPJ_P0031861 Prr15l protein_coding protein_coding MGP_LPJ_T0031862.1 MGP_LPJ_G0018920.1 mouse_genomes_project 11 99823502 99827386 + MGP_LPJ_P0031862 Prr15l protein_coding protein_coding MGP_LPJ_T0003322.1 MGP_LPJ_G0003065.1 mouse_genomes_project 11 105409569 105418517 + 4930417O22Rik antisense antisense MGP_LPJ_T0100169.1 MGP_LPJ_G0038432.1 mouse_genomes_project 11 81521757 81521889 - Gm24454 snoRNA snoRNA MGP_LPJ_T0033812.1 MGP_LPJ_G0019376.1 mouse_genomes_project 11 123749345 123758049 - MGP_LPJ_P0033812 Cbx4 protein_coding protein_coding MGP_LPJ_T0033813.1 MGP_LPJ_G0019376.1 mouse_genomes_project 11 123753195 123758049 - Cbx4 protein_coding processed_transcript MGP_LPJ_T0098938.1 MGP_LPJ_G0037201.1 mouse_genomes_project 11 95974269 95974376 - Gm24856 snRNA snRNA MGP_LPJ_T0098485.1 MGP_LPJ_G0036763.1 mouse_genomes_project 11 123860144 123860708 - Gm11753 sense_intronic sense_intronic MGP_LPJ_T0029350.1 MGP_LPJ_G0018324.1 mouse_genomes_project 11 60830816 60850480 + MGP_LPJ_P0029350 Lrrc48 protein_coding protein_coding MGP_LPJ_T0029351.1 MGP_LPJ_G0018324.1 mouse_genomes_project 11 60830816 60875558 + MGP_LPJ_P0029351 Lrrc48 protein_coding protein_coding MGP_LPJ_T0029352.1 MGP_LPJ_G0018324.1 mouse_genomes_project 11 60830816 60855526 + MGP_LPJ_P0029352 Lrrc48 protein_coding protein_coding MGP_LPJ_T0029353.1 MGP_LPJ_G0018324.1 mouse_genomes_project 11 60830844 60853387 + Lrrc48 protein_coding processed_transcript MGP_LPJ_T0029354.1 MGP_LPJ_G0018324.1 mouse_genomes_project 11 60830867 60875550 + MGP_LPJ_P0029354 Lrrc48 protein_coding protein_coding MGP_LPJ_T0101784.1 MGP_LPJ_G0039822.1 mouse_genomes_project 11 97443295 97444035 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0003135.1 MGP_LPJ_G0002915.1 mouse_genomes_project 11 3083992 3087318 + antisense antisense MGP_LPJ_T0028711.1 MGP_LPJ_G0018140.1 mouse_genomes_project 11 48919836 48921569 + MGP_LPJ_P0028711 Olfr1384 protein_coding protein_coding MGP_LPJ_T0029677.1 MGP_LPJ_G0018393.1 mouse_genomes_project 11 67910170 67937360 + MGP_LPJ_P0029677 Myh3 protein_coding protein_coding MGP_LPJ_T0029678.1 MGP_LPJ_G0018393.1 mouse_genomes_project 11 67910170 67937360 + MGP_LPJ_P0029678 Myh3 protein_coding protein_coding MGP_LPJ_T0029679.1 MGP_LPJ_G0018393.1 mouse_genomes_project 11 67910170 67937355 + MGP_LPJ_P0029679 Myh3 protein_coding protein_coding MGP_LPJ_T0031981.1 MGP_LPJ_G0018950.1 mouse_genomes_project 11 100974094 100978717 - MGP_LPJ_P0031981 protein_coding protein_coding MGP_LPJ_T0031982.1 MGP_LPJ_G0018950.1 mouse_genomes_project 11 100976470 100978465 - MGP_LPJ_P0031982 protein_coding protein_coding MGP_LPJ_T0028888.1 MGP_LPJ_G0018189.1 mouse_genomes_project 11 51699243 51735011 + MGP_LPJ_P0028888 Cdkl3 protein_coding protein_coding MGP_LPJ_T0028889.1 MGP_LPJ_G0018189.1 mouse_genomes_project 11 51699243 51739402 + MGP_LPJ_P0028889 Cdkl3 protein_coding protein_coding MGP_LPJ_T0028890.1 MGP_LPJ_G0018189.1 mouse_genomes_project 11 51699243 51789947 + MGP_LPJ_P0028890 Cdkl3 protein_coding protein_coding MGP_LPJ_T0028891.1 MGP_LPJ_G0018189.1 mouse_genomes_project 11 51699243 51730648 + MGP_LPJ_P0028891 Cdkl3 protein_coding protein_coding MGP_LPJ_T0028892.1 MGP_LPJ_G0018189.1 mouse_genomes_project 11 51699243 51735011 + MGP_LPJ_P0028892 Cdkl3 protein_coding protein_coding MGP_LPJ_T0028893.1 MGP_LPJ_G0018189.1 mouse_genomes_project 11 51699247 51725686 + MGP_LPJ_P0028893 Cdkl3 protein_coding protein_coding MGP_LPJ_T0028894.1 MGP_LPJ_G0018189.1 mouse_genomes_project 11 51699263 51730715 + MGP_LPJ_P0028894 Cdkl3 protein_coding protein_coding MGP_LPJ_T0028895.1 MGP_LPJ_G0018189.1 mouse_genomes_project 11 51699276 51716537 + MGP_LPJ_P0028895 Cdkl3 protein_coding protein_coding MGP_LPJ_T0028896.1 MGP_LPJ_G0018189.1 mouse_genomes_project 11 51699287 51759567 + MGP_LPJ_P0028896 Cdkl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0028897.1 MGP_LPJ_G0018189.1 mouse_genomes_project 11 51699312 51735011 + MGP_LPJ_P0028897 Cdkl3 protein_coding protein_coding MGP_LPJ_T0028898.1 MGP_LPJ_G0018189.1 mouse_genomes_project 11 51699950 51789719 + MGP_LPJ_P0028898 Cdkl3 protein_coding protein_coding MGP_LPJ_T0028899.1 MGP_LPJ_G0018189.1 mouse_genomes_project 11 51724875 51790389 + MGP_LPJ_P0028899 Cdkl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0028900.1 MGP_LPJ_G0018189.1 mouse_genomes_project 11 51725099 51730570 + MGP_LPJ_P0028900 Cdkl3 protein_coding protein_coding MGP_LPJ_T0028901.1 MGP_LPJ_G0018189.1 mouse_genomes_project 11 51729207 51795058 + MGP_LPJ_P0028901 Cdkl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0028902.1 MGP_LPJ_G0018189.1 mouse_genomes_project 11 51729292 51795064 + MGP_LPJ_P0028902 Cdkl3 protein_coding protein_coding MGP_LPJ_T0028903.1 MGP_LPJ_G0018189.1 mouse_genomes_project 11 51730372 51795056 + MGP_LPJ_P0028903 Cdkl3 protein_coding protein_coding MGP_LPJ_T0033036.1 MGP_LPJ_G0019218.1 mouse_genomes_project 11 110794424 110795349 - protein_coding retained_intron MGP_LPJ_T0033037.1 MGP_LPJ_G0019218.1 mouse_genomes_project 11 110794724 110801676 - MGP_LPJ_P0033037 protein_coding protein_coding MGP_LPJ_T0033038.1 MGP_LPJ_G0019218.1 mouse_genomes_project 11 110794724 110801968 - MGP_LPJ_P0033038 protein_coding protein_coding MGP_LPJ_T0033039.1 MGP_LPJ_G0019218.1 mouse_genomes_project 11 110794744 110802628 - MGP_LPJ_P0033039 protein_coding protein_coding MGP_LPJ_T0033040.1 MGP_LPJ_G0019218.1 mouse_genomes_project 11 110798643 110802558 - MGP_LPJ_P0033040 protein_coding protein_coding MGP_LPJ_T0003139.1 MGP_LPJ_G0002917.1 mouse_genomes_project 11 4436428 4439566 - antisense antisense MGP_LPJ_T0029903.1 MGP_LPJ_G0018446.1 mouse_genomes_project 11 70640788 70642635 + MGP_LPJ_P0029903 Sat2 protein_coding protein_coding MGP_LPJ_T0029904.1 MGP_LPJ_G0018446.1 mouse_genomes_project 11 70640816 70642223 + Sat2 protein_coding retained_intron MGP_LPJ_T0029905.1 MGP_LPJ_G0018446.1 mouse_genomes_project 11 70640816 70642635 + MGP_LPJ_P0029905 Sat2 protein_coding protein_coding MGP_LPJ_T0006192.1 MGP_LPJ_G0005170.1 mouse_genomes_project 11 1326459 1327939 + Gm11958 lincRNA lincRNA MGP_LPJ_T0012553.1 MGP_LPJ_G0010644.1 mouse_genomes_project 11 31717945 31718392 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100119.1 MGP_LPJ_G0038382.1 mouse_genomes_project 11 2695463 2695593 - Gm22471 snoRNA snoRNA MGP_LPJ_T0032484.1 MGP_LPJ_G0019108.1 mouse_genomes_project 11 104964770 104972098 + MGP_LPJ_P0032484 Nbr1 protein_coding protein_coding MGP_LPJ_T0032485.1 MGP_LPJ_G0019108.1 mouse_genomes_project 11 104965394 104995040 + MGP_LPJ_P0032485 Nbr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0032486.1 MGP_LPJ_G0019108.1 mouse_genomes_project 11 104965394 104995040 + MGP_LPJ_P0032486 Nbr1 protein_coding protein_coding MGP_LPJ_T0032487.1 MGP_LPJ_G0019108.1 mouse_genomes_project 11 104965403 104981631 + Nbr1 protein_coding processed_transcript MGP_LPJ_T0032488.1 MGP_LPJ_G0019108.1 mouse_genomes_project 11 104965418 104995040 + MGP_LPJ_P0032488 Nbr1 protein_coding protein_coding MGP_LPJ_T0032489.1 MGP_LPJ_G0019108.1 mouse_genomes_project 11 104965437 104972097 + MGP_LPJ_P0032489 Nbr1 protein_coding protein_coding MGP_LPJ_T0032490.1 MGP_LPJ_G0019108.1 mouse_genomes_project 11 104965451 104995039 + MGP_LPJ_P0032490 Nbr1 protein_coding protein_coding MGP_LPJ_T0032491.1 MGP_LPJ_G0019108.1 mouse_genomes_project 11 104968417 104972114 + MGP_LPJ_P0032491 Nbr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0032492.1 MGP_LPJ_G0019108.1 mouse_genomes_project 11 104968723 104994101 + MGP_LPJ_P0032492 Nbr1 protein_coding protein_coding MGP_LPJ_T0032493.1 MGP_LPJ_G0019108.1 mouse_genomes_project 11 104972070 104972133 + Nbr1 protein_coding misc_RNA MGP_LPJ_T0032494.1 MGP_LPJ_G0019108.1 mouse_genomes_project 11 104974338 104979037 + Nbr1 protein_coding retained_intron MGP_LPJ_T0032495.1 MGP_LPJ_G0019108.1 mouse_genomes_project 11 104979288 104981537 + Nbr1 protein_coding retained_intron MGP_LPJ_T0032496.1 MGP_LPJ_G0019108.1 mouse_genomes_project 11 104981384 104982494 + Nbr1 protein_coding retained_intron MGP_LPJ_T0032497.1 MGP_LPJ_G0019108.1 mouse_genomes_project 11 104981777 104982503 + Nbr1 protein_coding processed_transcript MGP_LPJ_T0032498.1 MGP_LPJ_G0019108.1 mouse_genomes_project 11 104985321 104988311 + Nbr1 protein_coding retained_intron MGP_LPJ_T0032499.1 MGP_LPJ_G0019108.1 mouse_genomes_project 11 104988201 104989726 + Nbr1 protein_coding retained_intron MGP_LPJ_T0032500.1 MGP_LPJ_G0019108.1 mouse_genomes_project 11 104990918 104993877 + Nbr1 protein_coding retained_intron MGP_LPJ_T0012486.1 MGP_LPJ_G0010577.1 mouse_genomes_project 11 13975365 13976422 + processed_pseudogene processed_pseudogene MGP_LPJ_T0031023.1 MGP_LPJ_G0018706.1 mouse_genomes_project 11 81637558 81690775 + MGP_LPJ_P0031023 Suz12 protein_coding protein_coding MGP_LPJ_T0031024.1 MGP_LPJ_G0018706.1 mouse_genomes_project 11 81637558 81690776 + MGP_LPJ_P0031024 Suz12 protein_coding protein_coding MGP_LPJ_T0031025.1 MGP_LPJ_G0018706.1 mouse_genomes_project 11 81640038 81648353 + Suz12 protein_coding retained_intron MGP_LPJ_T0031026.1 MGP_LPJ_G0018706.1 mouse_genomes_project 11 81640069 81663739 + Suz12 protein_coding retained_intron MGP_LPJ_T0031027.1 MGP_LPJ_G0018706.1 mouse_genomes_project 11 81640243 81663669 + MGP_LPJ_P0031027 Suz12 protein_coding nonsense_mediated_decay MGP_LPJ_T0031028.1 MGP_LPJ_G0018706.1 mouse_genomes_project 11 81681112 81688654 + MGP_LPJ_P0031028 Suz12 protein_coding nonsense_mediated_decay MGP_LPJ_T0031177.1 MGP_LPJ_G0018749.1 mouse_genomes_project 11 85296456 85306125 + MGP_LPJ_P0031177 Rasl10b protein_coding protein_coding MGP_LPJ_T0031178.1 MGP_LPJ_G0018749.1 mouse_genomes_project 11 85296994 85308330 + MGP_LPJ_P0031178 Rasl10b protein_coding protein_coding MGP_LPJ_T0031179.1 MGP_LPJ_G0018749.1 mouse_genomes_project 11 85296994 85308328 + MGP_LPJ_P0031179 Rasl10b protein_coding protein_coding MGP_LPJ_T0031180.1 MGP_LPJ_G0018749.1 mouse_genomes_project 11 85297378 85308329 + MGP_LPJ_P0031180 Rasl10b protein_coding protein_coding MGP_LPJ_T0030453.1 MGP_LPJ_G0018561.1 mouse_genomes_project 11 74380279 74395590 - MGP_LPJ_P0030453 Ctns protein_coding protein_coding MGP_LPJ_T0030454.1 MGP_LPJ_G0018561.1 mouse_genomes_project 11 74380280 74395590 - MGP_LPJ_P0030454 Ctns protein_coding protein_coding MGP_LPJ_T0030455.1 MGP_LPJ_G0018561.1 mouse_genomes_project 11 74383035 74385490 - Ctns protein_coding retained_intron MGP_LPJ_T0030456.1 MGP_LPJ_G0018561.1 mouse_genomes_project 11 74387995 74395569 - Ctns protein_coding retained_intron MGP_LPJ_T0030457.1 MGP_LPJ_G0018561.1 mouse_genomes_project 11 74388397 74395543 - Ctns protein_coding processed_transcript MGP_LPJ_T0029085.1 MGP_LPJ_G0018234.1 mouse_genomes_project 11 55008666 55038234 - MGP_LPJ_P0029085 Ccdc69 protein_coding protein_coding MGP_LPJ_T0029086.1 MGP_LPJ_G0018234.1 mouse_genomes_project 11 55009666 55038258 - MGP_LPJ_P0029086 Ccdc69 protein_coding protein_coding MGP_LPJ_T0028104.1 MGP_LPJ_G0017981.1 mouse_genomes_project 11 18983205 19069962 + MGP_LPJ_P0028104 Vps54 protein_coding protein_coding MGP_LPJ_T0028105.1 MGP_LPJ_G0017981.1 mouse_genomes_project 11 18983205 19069976 + MGP_LPJ_P0028105 Vps54 protein_coding protein_coding MGP_LPJ_T0028106.1 MGP_LPJ_G0017981.1 mouse_genomes_project 11 19012654 19069166 + MGP_LPJ_P0028106 Vps54 protein_coding protein_coding MGP_LPJ_T0028107.1 MGP_LPJ_G0017981.1 mouse_genomes_project 11 19023327 19038629 + Vps54 protein_coding processed_transcript MGP_LPJ_T0028108.1 MGP_LPJ_G0017981.1 mouse_genomes_project 11 19047511 19054574 + Vps54 protein_coding processed_transcript MGP_LPJ_T0028109.1 MGP_LPJ_G0017981.1 mouse_genomes_project 11 19061182 19063671 + Vps54 protein_coding processed_transcript MGP_LPJ_T0028110.1 MGP_LPJ_G0017981.1 mouse_genomes_project 11 19062758 19069378 + Vps54 protein_coding processed_transcript MGP_LPJ_T0029178.1 MGP_LPJ_G0018269.1 mouse_genomes_project 11 58811349 58827163 - MGP_LPJ_P0029178 protein_coding protein_coding MGP_LPJ_T0029268.1 MGP_LPJ_G0018308.1 mouse_genomes_project 11 59895102 59906379 - MGP_LPJ_P0029268 Zfp867 protein_coding protein_coding MGP_LPJ_T0030976.1 MGP_LPJ_G0018692.1 mouse_genomes_project 11 80314429 80315653 - MGP_LPJ_P0030976 Fam58b protein_coding protein_coding MGP_LPJ_T0033451.1 MGP_LPJ_G0019305.1 mouse_genomes_project 11 120314907 120349164 + MGP_LPJ_P0033451 Myo15b protein_coding protein_coding MGP_LPJ_T0033452.1 MGP_LPJ_G0019305.1 mouse_genomes_project 11 120334047 120336761 + Myo15b protein_coding processed_transcript MGP_LPJ_T0033453.1 MGP_LPJ_G0019305.1 mouse_genomes_project 11 120334065 120337867 + MGP_LPJ_P0033453 Myo15b protein_coding protein_coding MGP_LPJ_T0033454.1 MGP_LPJ_G0019305.1 mouse_genomes_project 11 120337030 120344052 + MGP_LPJ_P0033454 Myo15b protein_coding protein_coding MGP_LPJ_T0033455.1 MGP_LPJ_G0019305.1 mouse_genomes_project 11 120343044 120344053 + MGP_LPJ_P0033455 Myo15b protein_coding protein_coding MGP_LPJ_T0033456.1 MGP_LPJ_G0019305.1 mouse_genomes_project 11 120343413 120349160 + Myo15b protein_coding retained_intron MGP_LPJ_T0033457.1 MGP_LPJ_G0019305.1 mouse_genomes_project 11 120344207 120349175 + MGP_LPJ_P0033457 Myo15b protein_coding protein_coding MGP_LPJ_T0033458.1 MGP_LPJ_G0019305.1 mouse_genomes_project 11 120346810 120347741 + Myo15b protein_coding retained_intron MGP_LPJ_T0029577.1 MGP_LPJ_G0018366.1 mouse_genomes_project 11 63207908 63254258 - MGP_LPJ_P0029577 Lrrc75a protein_coding protein_coding MGP_LPJ_T0029578.1 MGP_LPJ_G0018366.1 mouse_genomes_project 11 63208847 63253775 - Lrrc75a protein_coding processed_transcript MGP_LPJ_T0029579.1 MGP_LPJ_G0018366.1 mouse_genomes_project 11 63209051 63253784 - Lrrc75a protein_coding processed_transcript MGP_LPJ_T0033696.1 MGP_LPJ_G0019349.1 mouse_genomes_project 11 122070113 122074759 + MGP_LPJ_P0033696 Gm11733 protein_coding protein_coding MGP_LPJ_T0030149.1 MGP_LPJ_G0018494.1 mouse_genomes_project 11 71328358 71330015 - MGP_LPJ_P0030149 Rnasek protein_coding nonsense_mediated_decay MGP_LPJ_T0030150.1 MGP_LPJ_G0018494.1 mouse_genomes_project 11 71328358 71330077 - MGP_LPJ_P0030150 Rnasek protein_coding protein_coding MGP_LPJ_T0030151.1 MGP_LPJ_G0018494.1 mouse_genomes_project 11 71328361 71329293 - MGP_LPJ_P0030151 Rnasek protein_coding protein_coding MGP_LPJ_T0006207.1 MGP_LPJ_G0005184.1 mouse_genomes_project 11 20431195 20432276 + Gm12052 lincRNA lincRNA MGP_LPJ_T0031690.1 MGP_LPJ_G0018875.1 mouse_genomes_project 11 97707771 97721286 - MGP_LPJ_P0031690 Sgca protein_coding protein_coding MGP_LPJ_T0031691.1 MGP_LPJ_G0018875.1 mouse_genomes_project 11 97707777 97715635 - MGP_LPJ_P0031691 Sgca protein_coding protein_coding MGP_LPJ_T0031692.1 MGP_LPJ_G0018875.1 mouse_genomes_project 11 97707802 97718422 - MGP_LPJ_P0031692 Sgca protein_coding protein_coding MGP_LPJ_T0031693.1 MGP_LPJ_G0018875.1 mouse_genomes_project 11 97708188 97721286 - MGP_LPJ_P0031693 Sgca protein_coding protein_coding MGP_LPJ_T0031695.1 MGP_LPJ_G0018875.1 mouse_genomes_project 11 97717184 97718448 - MGP_LPJ_P0031695 Sgca protein_coding protein_coding MGP_LPJ_T0029169.1 MGP_LPJ_G0018262.1 mouse_genomes_project 11 58628623 58640830 + MGP_LPJ_P0029169 Lypd8 protein_coding protein_coding MGP_LPJ_T0029170.1 MGP_LPJ_G0018262.1 mouse_genomes_project 11 58628623 58641021 + MGP_LPJ_P0029170 Lypd8 protein_coding protein_coding MGP_LPJ_T0032563.1 MGP_LPJ_G0019122.1 mouse_genomes_project 11 105572073 105573220 - MGP_LPJ_P0032563 Pyy protein_coding protein_coding MGP_LPJ_T0032564.1 MGP_LPJ_G0019122.1 mouse_genomes_project 11 105572073 105573230 - MGP_LPJ_P0032564 Pyy protein_coding protein_coding MGP_LPJ_T0032565.1 MGP_LPJ_G0019122.1 mouse_genomes_project 11 105572077 105572814 - MGP_LPJ_P0032565 Pyy protein_coding protein_coding MGP_LPJ_T0032566.1 MGP_LPJ_G0019122.1 mouse_genomes_project 11 105572358 105573230 - Pyy protein_coding retained_intron MGP_LPJ_T0003328.1 MGP_LPJ_G0003071.1 mouse_genomes_project 11 106923878 106929286 + Arhgap27os3 antisense antisense MGP_LPJ_T0027850.1 MGP_LPJ_G0017919.1 mouse_genomes_project 11 3026552 3036683 + MGP_LPJ_P0027850 Aebp1 protein_coding protein_coding MGP_LPJ_T0027851.1 MGP_LPJ_G0017919.1 mouse_genomes_project 11 3032190 3036683 + MGP_LPJ_P0027851 Aebp1 protein_coding protein_coding MGP_LPJ_T0027852.1 MGP_LPJ_G0017919.1 mouse_genomes_project 11 3033736 3034730 + Aebp1 protein_coding processed_transcript MGP_LPJ_T0028923.1 MGP_LPJ_G0018197.1 mouse_genomes_project 11 53065777 53110867 - MGP_LPJ_P0028923 Hspa4 protein_coding protein_coding MGP_LPJ_T0028924.1 MGP_LPJ_G0018197.1 mouse_genomes_project 11 53068843 53073205 - Hspa4 protein_coding retained_intron MGP_LPJ_T0028925.1 MGP_LPJ_G0018197.1 mouse_genomes_project 11 53070210 53110821 - Hspa4 protein_coding processed_transcript MGP_LPJ_T0031451.1 MGP_LPJ_G0018815.1 mouse_genomes_project 11 89918539 89930596 + MGP_LPJ_P0031451 Mpo protein_coding protein_coding MGP_LPJ_T0031452.1 MGP_LPJ_G0018815.1 mouse_genomes_project 11 89918756 89920968 + MGP_LPJ_P0031452 Mpo protein_coding protein_coding MGP_LPJ_T0031453.1 MGP_LPJ_G0018815.1 mouse_genomes_project 11 89919170 89930596 + MGP_LPJ_P0031453 Mpo protein_coding protein_coding MGP_LPJ_T0031454.1 MGP_LPJ_G0018815.1 mouse_genomes_project 11 89920119 89926110 + MGP_LPJ_P0031454 Mpo protein_coding nonsense_mediated_decay MGP_LPJ_T0031455.1 MGP_LPJ_G0018815.1 mouse_genomes_project 11 89928724 89930008 + MGP_LPJ_P0031455 Mpo protein_coding protein_coding MGP_LPJ_T0031456.1 MGP_LPJ_G0018815.1 mouse_genomes_project 11 89929299 89930556 + Mpo protein_coding retained_intron MGP_LPJ_T0100116.1 MGP_LPJ_G0038379.1 mouse_genomes_project 11 443679 443796 - Gm24439 snoRNA snoRNA MGP_LPJ_T0033311.1 MGP_LPJ_G0019283.1 mouse_genomes_project 11 119733480 119745721 + MGP_LPJ_P0033311 Otop3 protein_coding protein_coding MGP_LPJ_T0033312.1 MGP_LPJ_G0019283.1 mouse_genomes_project 11 119733483 119745720 + MGP_LPJ_P0033312 Otop3 protein_coding protein_coding MGP_LPJ_T0100171.1 MGP_LPJ_G0038434.1 mouse_genomes_project 11 85246215 85246347 - Gm23951 snoRNA snoRNA MGP_LPJ_T0030533.1 MGP_LPJ_G0018599.1 mouse_genomes_project 11 75951991 75959061 + Cluh protein_coding processed_transcript MGP_LPJ_T0030534.1 MGP_LPJ_G0018599.1 mouse_genomes_project 11 75952011 75972908 + MGP_LPJ_P0030534 Cluh protein_coding protein_coding MGP_LPJ_T0030535.1 MGP_LPJ_G0018599.1 mouse_genomes_project 11 75952011 75973850 + MGP_LPJ_P0030535 Cluh protein_coding protein_coding MGP_LPJ_T0030536.1 MGP_LPJ_G0018599.1 mouse_genomes_project 11 75952036 75973850 + Cluh protein_coding retained_intron MGP_LPJ_T0030537.1 MGP_LPJ_G0018599.1 mouse_genomes_project 11 75952326 75959849 + Cluh protein_coding processed_transcript MGP_LPJ_T0030538.1 MGP_LPJ_G0018599.1 mouse_genomes_project 11 75966974 75967801 + Cluh protein_coding retained_intron MGP_LPJ_T0033181.1 MGP_LPJ_G0019249.1 mouse_genomes_project 11 115148157 115159584 + MGP_LPJ_P0033181 Kcnj2 protein_coding protein_coding MGP_LPJ_T0006217.1 MGP_LPJ_G0005194.1 mouse_genomes_project 11 22816451 22842560 - Gm12665 lincRNA lincRNA MGP_LPJ_T0006218.1 MGP_LPJ_G0005194.1 mouse_genomes_project 11 22816451 22842568 - Gm12665 lincRNA lincRNA MGP_LPJ_T0012701.1 MGP_LPJ_G0010792.1 mouse_genomes_project 11 89574976 89576356 + processed_pseudogene processed_pseudogene MGP_LPJ_T0033842.1 MGP_LPJ_G0019383.1 mouse_genomes_project 11 123998007 124049880 + MGP_LPJ_P0033842 Card14 protein_coding protein_coding MGP_LPJ_T0033843.1 MGP_LPJ_G0019383.1 mouse_genomes_project 11 124002986 124049880 + MGP_LPJ_P0033843 Card14 protein_coding protein_coding MGP_LPJ_T0033844.1 MGP_LPJ_G0019383.1 mouse_genomes_project 11 124023868 124049692 + Card14 protein_coding processed_transcript MGP_LPJ_T0033845.1 MGP_LPJ_G0019383.1 mouse_genomes_project 11 124026162 124049879 + Card14 protein_coding processed_transcript MGP_LPJ_T0030902.1 MGP_LPJ_G0018675.1 mouse_genomes_project 11 79788718 79791004 + 2610507B11Rik protein_coding processed_transcript MGP_LPJ_T0030903.1 MGP_LPJ_G0018675.1 mouse_genomes_project 11 79788718 79819831 + MGP_LPJ_P0030903 2610507B11Rik protein_coding protein_coding MGP_LPJ_T0030904.1 MGP_LPJ_G0018675.1 mouse_genomes_project 11 79789443 79790938 + 2610507B11Rik protein_coding retained_intron MGP_LPJ_T0030905.1 MGP_LPJ_G0018675.1 mouse_genomes_project 11 79793104 79795152 + 2610507B11Rik protein_coding retained_intron MGP_LPJ_T0030906.1 MGP_LPJ_G0018675.1 mouse_genomes_project 11 79798942 79800396 + 2610507B11Rik protein_coding retained_intron MGP_LPJ_T0030907.1 MGP_LPJ_G0018675.1 mouse_genomes_project 11 79800122 79801859 + MGP_LPJ_P0030907 2610507B11Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0030908.1 MGP_LPJ_G0018675.1 mouse_genomes_project 11 79812382 79816404 + 2610507B11Rik protein_coding retained_intron MGP_LPJ_T0030909.1 MGP_LPJ_G0018675.1 mouse_genomes_project 11 79816360 79818918 + 2610507B11Rik protein_coding retained_intron MGP_LPJ_T0028772.1 MGP_LPJ_G0018156.1 mouse_genomes_project 11 49874137 49879375 + MGP_LPJ_P0028772 Cby3 protein_coding protein_coding MGP_LPJ_T0028773.1 MGP_LPJ_G0018156.1 mouse_genomes_project 11 49877436 49879375 + MGP_LPJ_P0028773 Cby3 protein_coding protein_coding MGP_LPJ_T0029926.1 MGP_LPJ_G0018451.1 mouse_genomes_project 11 70690906 70697880 - protein_coding retained_intron MGP_LPJ_T0029927.1 MGP_LPJ_G0018451.1 mouse_genomes_project 11 70690954 70694959 - MGP_LPJ_P0029927 protein_coding unknown_likely_coding MGP_LPJ_T0029928.1 MGP_LPJ_G0018451.1 mouse_genomes_project 11 70690954 70697864 - MGP_LPJ_P0029928 protein_coding unknown_likely_coding MGP_LPJ_T0029929.1 MGP_LPJ_G0018451.1 mouse_genomes_project 11 70691053 70691801 - protein_coding processed_transcript MGP_LPJ_T0029930.1 MGP_LPJ_G0018451.1 mouse_genomes_project 11 70691993 70697986 - MGP_LPJ_P0029930 protein_coding nonsense_mediated_decay MGP_LPJ_T0029931.1 MGP_LPJ_G0018451.1 mouse_genomes_project 11 70693162 70697879 - protein_coding processed_transcript MGP_LPJ_T0029932.1 MGP_LPJ_G0018451.1 mouse_genomes_project 11 70693170 70696446 - protein_coding processed_transcript MGP_LPJ_T0029933.1 MGP_LPJ_G0018451.1 mouse_genomes_project 11 70694140 70697878 - protein_coding processed_transcript MGP_LPJ_T0029934.1 MGP_LPJ_G0018451.1 mouse_genomes_project 11 70694187 70697293 - protein_coding processed_transcript MGP_LPJ_T0029935.1 MGP_LPJ_G0018451.1 mouse_genomes_project 11 70694255 70696785 - protein_coding retained_intron MGP_LPJ_T0029936.1 MGP_LPJ_G0018451.1 mouse_genomes_project 11 70696031 70697013 - protein_coding retained_intron MGP_LPJ_T0031491.1 MGP_LPJ_G0018826.1 mouse_genomes_project 11 90412706 90422226 + MGP_LPJ_P0031491 Mrps23 protein_coding protein_coding MGP_LPJ_T0031492.1 MGP_LPJ_G0018826.1 mouse_genomes_project 11 90412729 90422226 + MGP_LPJ_P0031492 Mrps23 protein_coding protein_coding MGP_LPJ_T0031493.1 MGP_LPJ_G0018826.1 mouse_genomes_project 11 90412742 90421399 + MGP_LPJ_P0031493 Mrps23 protein_coding protein_coding MGP_LPJ_T0031494.1 MGP_LPJ_G0018826.1 mouse_genomes_project 11 90412742 90420938 + MGP_LPJ_P0031494 Mrps23 protein_coding protein_coding MGP_LPJ_T0031495.1 MGP_LPJ_G0018826.1 mouse_genomes_project 11 90412762 90421700 + MGP_LPJ_P0031495 Mrps23 protein_coding protein_coding MGP_LPJ_T0006298.1 MGP_LPJ_G0005260.1 mouse_genomes_project 11 76752195 76752807 - Gm12336 lincRNA lincRNA MGP_LPJ_T0098951.1 MGP_LPJ_G0037214.1 mouse_genomes_project 11 109913425 109913569 - Gm25556 snRNA snRNA MGP_LPJ_T0012714.1 MGP_LPJ_G0010805.1 mouse_genomes_project 11 97935055 97935487 + processed_pseudogene processed_pseudogene MGP_LPJ_T0031515.1 MGP_LPJ_G0018833.1 mouse_genomes_project 11 91287822 91308350 + MGP_LPJ_P0031515 Trim25 protein_coding protein_coding MGP_LPJ_T0031516.1 MGP_LPJ_G0018833.1 mouse_genomes_project 11 91287822 91308350 + MGP_LPJ_P0031516 Trim25 protein_coding protein_coding MGP_LPJ_T0031517.1 MGP_LPJ_G0018833.1 mouse_genomes_project 11 91287822 91301786 + MGP_LPJ_P0031517 Trim25 protein_coding protein_coding MGP_LPJ_T0027769.1 MGP_LPJ_G0017902.1 mouse_genomes_project 11 2026453 2035764 - MGP_LPJ_P0027769 Nefh protein_coding protein_coding MGP_LPJ_T0029195.1 MGP_LPJ_G0018278.1 mouse_genomes_project 11 58980979 59067737 + MGP_LPJ_P0029195 Olfr316 protein_coding protein_coding MGP_LPJ_T0098940.1 MGP_LPJ_G0037203.1 mouse_genomes_project 11 98733307 98733432 + Gm24725 snRNA snRNA MGP_LPJ_T0100165.1 MGP_LPJ_G0038428.1 mouse_genomes_project 11 79698668 79698733 - Snord42a snoRNA snoRNA MGP_LPJ_T0033465.1 MGP_LPJ_G0019307.1 mouse_genomes_project 11 120356536 120362835 + MGP_LPJ_P0033465 Smim5 protein_coding protein_coding MGP_LPJ_T0033466.1 MGP_LPJ_G0019307.1 mouse_genomes_project 11 120356748 120362462 + MGP_LPJ_P0033466 Smim5 protein_coding protein_coding MGP_LPJ_T0033467.1 MGP_LPJ_G0019307.1 mouse_genomes_project 11 120356772 120362279 + MGP_LPJ_P0033467 Smim5 protein_coding protein_coding MGP_LPJ_T0032849.1 MGP_LPJ_G0019176.1 mouse_genomes_project 11 107952695 108074263 - MGP_LPJ_P0032849 Kansl1 protein_coding protein_coding MGP_LPJ_T0032850.1 MGP_LPJ_G0019176.1 mouse_genomes_project 11 107952967 108074263 - MGP_LPJ_P0032850 Kansl1 protein_coding protein_coding MGP_LPJ_T0032851.1 MGP_LPJ_G0019176.1 mouse_genomes_project 11 107952967 108103079 - MGP_LPJ_P0032851 Kansl1 protein_coding protein_coding MGP_LPJ_T0032852.1 MGP_LPJ_G0019176.1 mouse_genomes_project 11 107953011 108073032 - MGP_LPJ_P0032852 Kansl1 protein_coding protein_coding MGP_LPJ_T0032853.1 MGP_LPJ_G0019176.1 mouse_genomes_project 11 107954387 107964861 - Kansl1 protein_coding processed_transcript MGP_LPJ_T0032854.1 MGP_LPJ_G0019176.1 mouse_genomes_project 11 108057680 108102209 - MGP_LPJ_P0032854 Kansl1 protein_coding protein_coding MGP_LPJ_T0012763.1 MGP_LPJ_G0010854.1 mouse_genomes_project 11 117945233 117947760 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012706.1 MGP_LPJ_G0010797.1 mouse_genomes_project 11 92870517 92871057 - processed_pseudogene processed_pseudogene MGP_LPJ_T0027929.1 MGP_LPJ_G0017937.1 mouse_genomes_project 11 3808850 3817067 - MGP_LPJ_P0027929 protein_coding protein_coding MGP_LPJ_T0027930.1 MGP_LPJ_G0017937.1 mouse_genomes_project 11 3808919 3810420 - MGP_LPJ_P0027930 protein_coding nonsense_mediated_decay MGP_LPJ_T0027931.1 MGP_LPJ_G0017937.1 mouse_genomes_project 11 3808930 3810966 - MGP_LPJ_P0027931 protein_coding nonsense_mediated_decay MGP_LPJ_T0031876.1 MGP_LPJ_G0018927.1 mouse_genomes_project 11 99956742 99976512 + MGP_LPJ_P0031876 Osbpl7 protein_coding protein_coding MGP_LPJ_T0031877.1 MGP_LPJ_G0018927.1 mouse_genomes_project 11 99956934 99958938 + Osbpl7 protein_coding processed_transcript MGP_LPJ_T0031878.1 MGP_LPJ_G0018927.1 mouse_genomes_project 11 99956934 99976512 + MGP_LPJ_P0031878 Osbpl7 protein_coding protein_coding MGP_LPJ_T0031879.1 MGP_LPJ_G0018927.1 mouse_genomes_project 11 99958440 99959090 + Osbpl7 protein_coding retained_intron MGP_LPJ_T0031880.1 MGP_LPJ_G0018927.1 mouse_genomes_project 11 99959446 99963388 + Osbpl7 protein_coding retained_intron MGP_LPJ_T0031881.1 MGP_LPJ_G0018927.1 mouse_genomes_project 11 99974490 99975879 + Osbpl7 protein_coding retained_intron MGP_LPJ_T0030977.1 MGP_LPJ_G0018693.1 mouse_genomes_project 11 80394163 80416124 + MGP_LPJ_P0030977 Lyrm9 protein_coding protein_coding MGP_LPJ_T0030978.1 MGP_LPJ_G0018693.1 mouse_genomes_project 11 80394183 80407514 + MGP_LPJ_P0030978 Lyrm9 protein_coding protein_coding MGP_LPJ_T0030979.1 MGP_LPJ_G0018693.1 mouse_genomes_project 11 80394208 80408533 + Lyrm9 protein_coding processed_transcript MGP_LPJ_T0011811.1 MGP_LPJ_G0009927.1 mouse_genomes_project 11 74939620 74940683 - MGP_LPJ_P0011811 Olfr388-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_LPJ_T0009674.1 MGP_LPJ_G0007792.1 mouse_genomes_project 11 26991829 26991915 + Mir216b miRNA miRNA MGP_LPJ_T0012578.1 MGP_LPJ_G0010669.1 mouse_genomes_project 11 47804971 47806243 - processed_pseudogene processed_pseudogene MGP_LPJ_T0033870.1 MGP_LPJ_G0019389.1 mouse_genomes_project 11 124337898 124556939 + Rptor protein_coding retained_intron MGP_LPJ_T0033871.1 MGP_LPJ_G0019389.1 mouse_genomes_project 11 124337988 124514266 + Rptor protein_coding retained_intron MGP_LPJ_T0033872.1 MGP_LPJ_G0019389.1 mouse_genomes_project 11 124338008 124578786 + Rptor protein_coding retained_intron MGP_LPJ_T0033873.1 MGP_LPJ_G0019389.1 mouse_genomes_project 11 124338142 124635530 + MGP_LPJ_P0033873 Rptor protein_coding protein_coding MGP_LPJ_T0033874.1 MGP_LPJ_G0019389.1 mouse_genomes_project 11 124338691 124635699 + MGP_LPJ_P0033874 Rptor protein_coding nonsense_mediated_decay MGP_LPJ_T0033875.1 MGP_LPJ_G0019389.1 mouse_genomes_project 11 124391650 124600329 + Rptor protein_coding retained_intron MGP_LPJ_T0033876.1 MGP_LPJ_G0019389.1 mouse_genomes_project 11 124530788 124580693 + MGP_LPJ_P0033876 Rptor protein_coding nonsense_mediated_decay MGP_LPJ_T0033877.1 MGP_LPJ_G0019389.1 mouse_genomes_project 11 124543253 124601677 + Rptor protein_coding retained_intron MGP_LPJ_T0033878.1 MGP_LPJ_G0019389.1 mouse_genomes_project 11 124556709 124591293 + MGP_LPJ_P0033878 Rptor protein_coding protein_coding MGP_LPJ_T0033879.1 MGP_LPJ_G0019389.1 mouse_genomes_project 11 124591253 124632276 + MGP_LPJ_P0033879 Rptor protein_coding nonsense_mediated_decay MGP_LPJ_T0033880.1 MGP_LPJ_G0019389.1 mouse_genomes_project 11 124591303 124592797 + Rptor protein_coding retained_intron MGP_LPJ_T0033881.1 MGP_LPJ_G0019389.1 mouse_genomes_project 11 124592438 124619157 + MGP_LPJ_P0033881 Rptor protein_coding nonsense_mediated_decay MGP_LPJ_T0029218.1 MGP_LPJ_G0018293.1 mouse_genomes_project 11 59352319 59354466 + MGP_LPJ_P0029218 Hist3h2a protein_coding protein_coding MGP_LPJ_T0032381.1 MGP_LPJ_G0019084.1 mouse_genomes_project 11 104524774 104536416 + MGP_LPJ_P0032381 Tubg2 protein_coding protein_coding MGP_LPJ_T0032382.1 MGP_LPJ_G0019084.1 mouse_genomes_project 11 104524987 104536417 + MGP_LPJ_P0032382 Tubg2 protein_coding unknown_likely_coding MGP_LPJ_T0006382.1 MGP_LPJ_G0005319.1 mouse_genomes_project 11 118718104 118759075 - 4932435O22Rik lincRNA lincRNA MGP_LPJ_T0006383.1 MGP_LPJ_G0005319.1 mouse_genomes_project 11 118718342 118729346 - 4932435O22Rik lincRNA lincRNA MGP_LPJ_T0027645.1 MGP_LPJ_G0017872.1 mouse_genomes_project 11 626014 669104 + MGP_LPJ_P0027645 Morc2a protein_coding protein_coding MGP_LPJ_T0027646.1 MGP_LPJ_G0017872.1 mouse_genomes_project 11 626279 646869 + MGP_LPJ_P0027646 Morc2a protein_coding protein_coding MGP_LPJ_T0027647.1 MGP_LPJ_G0017872.1 mouse_genomes_project 11 626773 669211 + MGP_LPJ_P0027647 Morc2a protein_coding protein_coding MGP_LPJ_T0027648.1 MGP_LPJ_G0017872.1 mouse_genomes_project 11 657365 662641 + Morc2a protein_coding processed_transcript MGP_LPJ_T0027649.1 MGP_LPJ_G0017872.1 mouse_genomes_project 11 657725 658604 + Morc2a protein_coding processed_transcript MGP_LPJ_T0027650.1 MGP_LPJ_G0017872.1 mouse_genomes_project 11 657820 662423 + Morc2a protein_coding processed_transcript MGP_LPJ_T0029764.1 MGP_LPJ_G0018415.1 mouse_genomes_project 11 69890274 69897189 - MGP_LPJ_P0029764 Odf4 protein_coding protein_coding MGP_LPJ_T0029765.1 MGP_LPJ_G0018415.1 mouse_genomes_project 11 69890275 69897221 - MGP_LPJ_P0029765 Odf4 protein_coding nonsense_mediated_decay MGP_LPJ_T0029766.1 MGP_LPJ_G0018415.1 mouse_genomes_project 11 69890402 69896956 - MGP_LPJ_P0029766 Odf4 protein_coding nonsense_mediated_decay MGP_LPJ_T0029767.1 MGP_LPJ_G0018415.1 mouse_genomes_project 11 69891258 69897214 - MGP_LPJ_P0029767 Odf4 protein_coding protein_coding MGP_LPJ_T0033970.1 MGP_LPJ_G0019407.1 mouse_genomes_project 11 125234196 125236938 - Arl16 protein_coding processed_transcript MGP_LPJ_T0033971.1 MGP_LPJ_G0019407.1 mouse_genomes_project 11 125234654 125236605 - Arl16 protein_coding processed_transcript MGP_LPJ_T0033972.1 MGP_LPJ_G0019407.1 mouse_genomes_project 11 125234768 125236931 - MGP_LPJ_P0033972 Arl16 protein_coding protein_coding MGP_LPJ_T0033973.1 MGP_LPJ_G0019407.1 mouse_genomes_project 11 125234921 125236796 - Arl16 protein_coding processed_transcript MGP_LPJ_T0033974.1 MGP_LPJ_G0019407.1 mouse_genomes_project 11 125234928 125236665 - Arl16 protein_coding processed_transcript MGP_LPJ_T0033975.1 MGP_LPJ_G0019407.1 mouse_genomes_project 11 125234943 125236751 - Arl16 protein_coding processed_transcript MGP_LPJ_T0033976.1 MGP_LPJ_G0019407.1 mouse_genomes_project 11 125235084 125236812 - Arl16 protein_coding processed_transcript MGP_LPJ_T0033977.1 MGP_LPJ_G0019407.1 mouse_genomes_project 11 125235098 125236752 - Arl16 protein_coding processed_transcript MGP_LPJ_T0033978.1 MGP_LPJ_G0019407.1 mouse_genomes_project 11 125235100 125236727 - Arl16 protein_coding processed_transcript MGP_LPJ_T0033979.1 MGP_LPJ_G0019407.1 mouse_genomes_project 11 125235245 125236764 - Arl16 protein_coding processed_transcript MGP_LPJ_T0033980.1 MGP_LPJ_G0019407.1 mouse_genomes_project 11 125236235 125236784 - Arl16 protein_coding processed_transcript MGP_LPJ_T0029186.1 MGP_LPJ_G0018272.1 mouse_genomes_project 11 58884180 58885302 + MGP_LPJ_P0029186 Olfr324 protein_coding protein_coding MGP_LPJ_T0012517.1 MGP_LPJ_G0010608.1 mouse_genomes_project 11 20213007 20214911 + processed_pseudogene processed_pseudogene MGP_LPJ_T0032570.1 MGP_LPJ_G0019124.1 mouse_genomes_project 11 105623637 105627496 - MGP_LPJ_P0032570 Tmem101 protein_coding protein_coding MGP_LPJ_T0032571.1 MGP_LPJ_G0019124.1 mouse_genomes_project 11 105625265 105627439 - Tmem101 protein_coding processed_transcript MGP_LPJ_T0032572.1 MGP_LPJ_G0019124.1 mouse_genomes_project 11 105626906 105627447 - Tmem101 protein_coding processed_transcript MGP_LPJ_T0030854.1 MGP_LPJ_G0018664.1 mouse_genomes_project 11 79544126 79566957 + MGP_LPJ_P0030854 Flot2 protein_coding protein_coding MGP_LPJ_T0030855.1 MGP_LPJ_G0018664.1 mouse_genomes_project 11 79544126 79566957 + MGP_LPJ_P0030855 Flot2 protein_coding nonsense_mediated_decay MGP_LPJ_T0030856.1 MGP_LPJ_G0018664.1 mouse_genomes_project 11 79544136 79566954 + MGP_LPJ_P0030856 Flot2 protein_coding protein_coding MGP_LPJ_T0030857.1 MGP_LPJ_G0018664.1 mouse_genomes_project 11 79544179 79566957 + MGP_LPJ_P0030857 Flot2 protein_coding protein_coding MGP_LPJ_T0030858.1 MGP_LPJ_G0018664.1 mouse_genomes_project 11 79546499 79566957 + Flot2 protein_coding processed_transcript MGP_LPJ_T0032919.1 MGP_LPJ_G0019190.1 mouse_genomes_project 11 109688723 109712120 + MGP_LPJ_P0032919 Ace protein_coding protein_coding MGP_LPJ_T0032920.1 MGP_LPJ_G0019190.1 mouse_genomes_project 11 109692103 109711416 + MGP_LPJ_P0032920 Ace protein_coding protein_coding MGP_LPJ_T0032921.1 MGP_LPJ_G0019190.1 mouse_genomes_project 11 109695997 109711409 + MGP_LPJ_P0032921 Ace protein_coding protein_coding MGP_LPJ_T0032922.1 MGP_LPJ_G0019190.1 mouse_genomes_project 11 109697392 109707270 + Ace protein_coding processed_transcript MGP_LPJ_T0032218.1 MGP_LPJ_G0019045.1 mouse_genomes_project 11 103477132 103485463 - MGP_LPJ_P0032218 Krt9 protein_coding protein_coding MGP_LPJ_T0030484.1 MGP_LPJ_G0018574.1 mouse_genomes_project 11 74895604 74929066 + MGP_LPJ_P0030484 Zfp735 protein_coding protein_coding MGP_LPJ_T0030485.1 MGP_LPJ_G0018574.1 mouse_genomes_project 11 74895625 74926099 + Zfp735 protein_coding processed_transcript MGP_LPJ_T0030486.1 MGP_LPJ_G0018574.1 mouse_genomes_project 11 74903099 74926031 + Zfp735 protein_coding processed_transcript MGP_LPJ_T0034160.1 MGP_LPJ_G0019444.1 mouse_genomes_project 11 125991951 126019536 - MGP_LPJ_P0034160 Ogfod3 protein_coding protein_coding MGP_LPJ_T0006369.1 MGP_LPJ_G0005310.1 mouse_genomes_project 11 115921470 115925803 - Gm11674 lincRNA lincRNA MGP_LPJ_T0028364.1 MGP_LPJ_G0018038.1 mouse_genomes_project 11 30642673 30655410 - MGP_LPJ_P0028364 Rhbdf1 protein_coding protein_coding MGP_LPJ_T0028365.1 MGP_LPJ_G0018038.1 mouse_genomes_project 11 30642674 30650409 - Rhbdf1 protein_coding retained_intron MGP_LPJ_T0028366.1 MGP_LPJ_G0018038.1 mouse_genomes_project 11 30642675 30655390 - MGP_LPJ_P0028366 Rhbdf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0028367.1 MGP_LPJ_G0018038.1 mouse_genomes_project 11 30642892 30644228 - MGP_LPJ_P0028367 Rhbdf1 protein_coding protein_coding MGP_LPJ_T0028368.1 MGP_LPJ_G0018038.1 mouse_genomes_project 11 30643038 30643989 - Rhbdf1 protein_coding retained_intron MGP_LPJ_T0028369.1 MGP_LPJ_G0018038.1 mouse_genomes_project 11 30643487 30644359 - Rhbdf1 protein_coding retained_intron MGP_LPJ_T0028370.1 MGP_LPJ_G0018038.1 mouse_genomes_project 11 30647375 30655390 - MGP_LPJ_P0028370 Rhbdf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0028371.1 MGP_LPJ_G0018038.1 mouse_genomes_project 11 30648154 30655354 - MGP_LPJ_P0028371 Rhbdf1 protein_coding protein_coding MGP_LPJ_T0028372.1 MGP_LPJ_G0018038.1 mouse_genomes_project 11 30649088 30655369 - MGP_LPJ_P0028372 Rhbdf1 protein_coding protein_coding MGP_LPJ_T0033395.1 MGP_LPJ_G0019298.1 mouse_genomes_project 11 120035037 120040008 - Mif4gd protein_coding processed_transcript MGP_LPJ_T0033396.1 MGP_LPJ_G0019298.1 mouse_genomes_project 11 120035037 120040048 - Mif4gd protein_coding processed_transcript MGP_LPJ_T0033397.1 MGP_LPJ_G0019298.1 mouse_genomes_project 11 120035037 120040090 - MGP_LPJ_P0033397 Mif4gd protein_coding protein_coding MGP_LPJ_T0033398.1 MGP_LPJ_G0019298.1 mouse_genomes_project 11 120035037 120039612 - MGP_LPJ_P0033398 Mif4gd protein_coding protein_coding MGP_LPJ_T0033399.1 MGP_LPJ_G0019298.1 mouse_genomes_project 11 120035268 120039999 - MGP_LPJ_P0033399 Mif4gd protein_coding protein_coding MGP_LPJ_T0033400.1 MGP_LPJ_G0019298.1 mouse_genomes_project 11 120035326 120039951 - Mif4gd protein_coding processed_transcript MGP_LPJ_T0033401.1 MGP_LPJ_G0019298.1 mouse_genomes_project 11 120035536 120040020 - Mif4gd protein_coding processed_transcript MGP_LPJ_T0033402.1 MGP_LPJ_G0019298.1 mouse_genomes_project 11 120035631 120039235 - MGP_LPJ_P0033402 Mif4gd protein_coding protein_coding MGP_LPJ_T0033403.1 MGP_LPJ_G0019298.1 mouse_genomes_project 11 120036296 120040025 - Mif4gd protein_coding processed_transcript MGP_LPJ_T0033404.1 MGP_LPJ_G0019298.1 mouse_genomes_project 11 120039210 120040041 - Mif4gd protein_coding processed_transcript MGP_LPJ_T0030677.1 MGP_LPJ_G0018629.1 mouse_genomes_project 11 77388354 77398345 - MGP_LPJ_P0030677 Fam101b protein_coding protein_coding MGP_LPJ_T0029664.1 MGP_LPJ_G0018389.1 mouse_genomes_project 11 67731956 67750039 + MGP_LPJ_P0029664 Pirt protein_coding protein_coding MGP_LPJ_T0098911.1 MGP_LPJ_G0037174.1 mouse_genomes_project 11 69871914 69872017 + Gm22608 snRNA snRNA MGP_LPJ_T0009759.1 MGP_LPJ_G0007877.1 mouse_genomes_project 11 103751774 103751855 - Gm27374 miRNA miRNA MGP_LPJ_T0028941.1 MGP_LPJ_G0018202.1 mouse_genomes_project 11 53266019 53272483 + Gdf9 protein_coding processed_transcript MGP_LPJ_T0028942.1 MGP_LPJ_G0018202.1 mouse_genomes_project 11 53267838 53268777 + Gdf9 protein_coding processed_transcript MGP_LPJ_T0028943.1 MGP_LPJ_G0018202.1 mouse_genomes_project 11 53268295 53273485 + MGP_LPJ_P0028943 Gdf9 protein_coding protein_coding MGP_LPJ_T0030986.1 MGP_LPJ_G0018696.1 mouse_genomes_project 11 80597039 80732585 - MGP_LPJ_P0030986 Ksr1 protein_coding protein_coding MGP_LPJ_T0030987.1 MGP_LPJ_G0018696.1 mouse_genomes_project 11 80600929 80732427 - MGP_LPJ_P0030987 Ksr1 protein_coding unknown_likely_coding MGP_LPJ_T0030988.1 MGP_LPJ_G0018696.1 mouse_genomes_project 11 80611569 80732585 - MGP_LPJ_P0030988 Ksr1 protein_coding protein_coding MGP_LPJ_T0030989.1 MGP_LPJ_G0018696.1 mouse_genomes_project 11 80630837 80645782 - MGP_LPJ_P0030989 Ksr1 protein_coding protein_coding MGP_LPJ_T0030990.1 MGP_LPJ_G0018696.1 mouse_genomes_project 11 80631100 80643534 - MGP_LPJ_P0030990 Ksr1 protein_coding protein_coding MGP_LPJ_T0029859.1 MGP_LPJ_G0018435.1 mouse_genomes_project 11 70339051 70344387 - Chd3 protein_coding retained_intron MGP_LPJ_T0029860.1 MGP_LPJ_G0018435.1 mouse_genomes_project 11 70339051 70341796 - Chd3 protein_coding retained_intron MGP_LPJ_T0029861.1 MGP_LPJ_G0018435.1 mouse_genomes_project 11 70339051 70367130 - MGP_LPJ_P0029861 Chd3 protein_coding protein_coding MGP_LPJ_T0029862.1 MGP_LPJ_G0018435.1 mouse_genomes_project 11 70340126 70393985 - MGP_LPJ_P0029862 Chd3 protein_coding unknown_likely_coding MGP_LPJ_T0029863.1 MGP_LPJ_G0018435.1 mouse_genomes_project 11 70340126 70367130 - MGP_LPJ_P0029863 Chd3 protein_coding protein_coding MGP_LPJ_T0029864.1 MGP_LPJ_G0018435.1 mouse_genomes_project 11 70340911 70362593 - MGP_LPJ_P0029864 Chd3 protein_coding protein_coding MGP_LPJ_T0029865.1 MGP_LPJ_G0018435.1 mouse_genomes_project 11 70341912 70342911 - Chd3 protein_coding retained_intron MGP_LPJ_T0029866.1 MGP_LPJ_G0018435.1 mouse_genomes_project 11 70349669 70350267 - Chd3 protein_coding retained_intron MGP_LPJ_T0029867.1 MGP_LPJ_G0018435.1 mouse_genomes_project 11 70350262 70354444 - MGP_LPJ_P0029867 Chd3 protein_coding protein_coding MGP_LPJ_T0029868.1 MGP_LPJ_G0018435.1 mouse_genomes_project 11 70358555 70359570 - MGP_LPJ_P0029868 Chd3 protein_coding protein_coding MGP_LPJ_T0029869.1 MGP_LPJ_G0018435.1 mouse_genomes_project 11 70358572 70359570 - MGP_LPJ_P0029869 Chd3 protein_coding protein_coding MGP_LPJ_T0033471.1 MGP_LPJ_G0019309.1 mouse_genomes_project 11 120390116 120426606 + MGP_LPJ_P0033471 Sap30bp protein_coding protein_coding MGP_LPJ_T0033472.1 MGP_LPJ_G0019309.1 mouse_genomes_project 11 120390407 120416096 + Sap30bp protein_coding processed_transcript MGP_LPJ_T0033473.1 MGP_LPJ_G0019309.1 mouse_genomes_project 11 120390471 120396189 + Sap30bp protein_coding processed_transcript MGP_LPJ_T0033474.1 MGP_LPJ_G0019309.1 mouse_genomes_project 11 120390508 120425416 + Sap30bp protein_coding processed_transcript MGP_LPJ_T0033475.1 MGP_LPJ_G0019309.1 mouse_genomes_project 11 120390510 120424513 + MGP_LPJ_P0033475 Sap30bp protein_coding unknown_likely_coding MGP_LPJ_T0029778.1 MGP_LPJ_G0018419.1 mouse_genomes_project 11 69966806 69989951 - MGP_LPJ_P0029778 Pfas protein_coding protein_coding MGP_LPJ_T0029779.1 MGP_LPJ_G0018419.1 mouse_genomes_project 11 69966809 69975889 - Pfas protein_coding retained_intron MGP_LPJ_T0029780.1 MGP_LPJ_G0018419.1 mouse_genomes_project 11 69967569 69972218 - Pfas protein_coding retained_intron MGP_LPJ_T0029781.1 MGP_LPJ_G0018419.1 mouse_genomes_project 11 69969321 69972962 - MGP_LPJ_P0029781 Pfas protein_coding protein_coding MGP_LPJ_T0029782.1 MGP_LPJ_G0018419.1 mouse_genomes_project 11 69972332 69973438 - Pfas protein_coding retained_intron MGP_LPJ_T0029783.1 MGP_LPJ_G0018419.1 mouse_genomes_project 11 69974594 69979159 - MGP_LPJ_P0029783 Pfas protein_coding protein_coding MGP_LPJ_T0029784.1 MGP_LPJ_G0018419.1 mouse_genomes_project 11 69978448 69989942 - Pfas protein_coding retained_intron MGP_LPJ_T0012532.1 MGP_LPJ_G0010623.1 mouse_genomes_project 11 26166526 26169609 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006277.1 MGP_LPJ_G0005245.1 mouse_genomes_project 11 65559675 65562827 - Gm12292 lincRNA lincRNA MGP_LPJ_T0017106.1 MGP_LPJ_G0015069.1 mouse_genomes_project 11 16434572 16441332 - 8430419K02Rik processed_transcript processed_transcript MGP_LPJ_T0017107.1 MGP_LPJ_G0015069.1 mouse_genomes_project 11 16434676 16456090 - 8430419K02Rik processed_transcript processed_transcript MGP_LPJ_T0003156.1 MGP_LPJ_G0002929.1 mouse_genomes_project 11 26580822 26584788 + Gm12081 antisense antisense MGP_LPJ_T0097975.1 MGP_LPJ_G0036256.1 mouse_genomes_project 11 59625457 59625936 - pseudogene pseudogene MGP_LPJ_T0030345.1 MGP_LPJ_G0018532.1 mouse_genomes_project 11 73147576 73159148 - MGP_LPJ_P0030345 Aipl1 protein_coding protein_coding MGP_LPJ_T0030346.1 MGP_LPJ_G0018532.1 mouse_genomes_project 11 73148333 73159168 - MGP_LPJ_P0030346 Aipl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0028074.1 MGP_LPJ_G0017973.1 mouse_genomes_project 11 17727884 17791512 - MGP_LPJ_P0028074 Actr2 protein_coding protein_coding MGP_LPJ_T0028075.1 MGP_LPJ_G0017973.1 mouse_genomes_project 11 17744722 17791466 - Actr2 protein_coding processed_transcript MGP_LPJ_T0028076.1 MGP_LPJ_G0017973.1 mouse_genomes_project 11 17778983 17791508 - Actr2 protein_coding retained_intron MGP_LPJ_T0033512.1 MGP_LPJ_G0019316.1 mouse_genomes_project 11 120575728 120578097 - Trim47 protein_coding processed_transcript MGP_LPJ_T0033513.1 MGP_LPJ_G0019316.1 mouse_genomes_project 11 120575728 120580205 - MGP_LPJ_P0033513 Trim47 protein_coding protein_coding MGP_LPJ_T0033514.1 MGP_LPJ_G0019316.1 mouse_genomes_project 11 120575728 120580214 - MGP_LPJ_P0033514 Trim47 protein_coding protein_coding MGP_LPJ_T0033515.1 MGP_LPJ_G0019316.1 mouse_genomes_project 11 120576185 120577061 - Trim47 protein_coding processed_transcript MGP_LPJ_T0033516.1 MGP_LPJ_G0019316.1 mouse_genomes_project 11 120576315 120577718 - Trim47 protein_coding processed_transcript MGP_LPJ_T0033517.1 MGP_LPJ_G0019316.1 mouse_genomes_project 11 120576368 120578013 - Trim47 protein_coding processed_transcript MGP_LPJ_T0033518.1 MGP_LPJ_G0019316.1 mouse_genomes_project 11 120577788 120597697 - Trim47 protein_coding processed_transcript MGP_LPJ_T0031200.1 MGP_LPJ_G0018757.1 mouse_genomes_project 11 85480462 85485690 - MGP_LPJ_P0031200 Ccl6 protein_coding protein_coding MGP_LPJ_T0031201.1 MGP_LPJ_G0018757.1 mouse_genomes_project 11 85480975 85482475 - Ccl6 protein_coding retained_intron MGP_LPJ_T0031202.1 MGP_LPJ_G0018757.1 mouse_genomes_project 11 85482052 85485578 - Ccl6 protein_coding retained_intron MGP_LPJ_T0098912.1 MGP_LPJ_G0037175.1 mouse_genomes_project 11 70067548 70067649 + Gm25371 snRNA snRNA MGP_LPJ_T0033499.1 MGP_LPJ_G0019314.1 mouse_genomes_project 11 120526452 120543190 - MGP_LPJ_P0033499 Unc13d protein_coding protein_coding MGP_LPJ_T0033500.1 MGP_LPJ_G0019314.1 mouse_genomes_project 11 120526453 120543401 - MGP_LPJ_P0033500 Unc13d protein_coding protein_coding MGP_LPJ_T0033501.1 MGP_LPJ_G0019314.1 mouse_genomes_project 11 120526453 120543401 - MGP_LPJ_P0033501 Unc13d protein_coding protein_coding MGP_LPJ_T0033502.1 MGP_LPJ_G0019314.1 mouse_genomes_project 11 120526933 120543064 - MGP_LPJ_P0033502 Unc13d protein_coding nonsense_mediated_decay MGP_LPJ_T0033503.1 MGP_LPJ_G0019314.1 mouse_genomes_project 11 120527017 120543030 - MGP_LPJ_P0033503 Unc13d protein_coding protein_coding MGP_LPJ_T0033504.1 MGP_LPJ_G0019314.1 mouse_genomes_project 11 120533149 120534710 - Unc13d protein_coding retained_intron MGP_LPJ_T0033505.1 MGP_LPJ_G0019314.1 mouse_genomes_project 11 120541546 120542490 - MGP_LPJ_P0033505 Unc13d protein_coding protein_coding MGP_LPJ_T0033506.1 MGP_LPJ_G0019314.1 mouse_genomes_project 11 120541909 120543381 - MGP_LPJ_P0033506 Unc13d protein_coding protein_coding MGP_LPJ_T0030387.1 MGP_LPJ_G0018545.1 mouse_genomes_project 11 73577563 73587969 + Mybbp1a protein_coding retained_intron MGP_LPJ_T0030388.1 MGP_LPJ_G0018545.1 mouse_genomes_project 11 73577563 73587969 + MGP_LPJ_P0030388 Mybbp1a protein_coding protein_coding MGP_LPJ_T0030389.1 MGP_LPJ_G0018545.1 mouse_genomes_project 11 73577565 73587430 + Mybbp1a protein_coding retained_intron MGP_LPJ_T0030390.1 MGP_LPJ_G0018545.1 mouse_genomes_project 11 73577585 73579782 + Mybbp1a protein_coding retained_intron MGP_LPJ_T0030391.1 MGP_LPJ_G0018545.1 mouse_genomes_project 11 73579980 73580764 + Mybbp1a protein_coding retained_intron MGP_LPJ_T0030392.1 MGP_LPJ_G0018545.1 mouse_genomes_project 11 73584417 73587206 + Mybbp1a protein_coding retained_intron MGP_LPJ_T0030393.1 MGP_LPJ_G0018545.1 mouse_genomes_project 11 73585838 73586907 + Mybbp1a protein_coding retained_intron MGP_LPJ_T0030394.1 MGP_LPJ_G0018545.1 mouse_genomes_project 11 73586774 73587303 + Mybbp1a protein_coding retained_intron MGP_LPJ_T0003204.1 MGP_LPJ_G0002973.1 mouse_genomes_project 11 60259614 60267870 + Gm16062 antisense antisense MGP_LPJ_T0006333.1 MGP_LPJ_G0005283.1 mouse_genomes_project 11 91280609 91285022 - Gm11496 lincRNA lincRNA MGP_LPJ_T0029837.1 MGP_LPJ_G0018431.1 mouse_genomes_project 11 70210504 70229350 - MGP_LPJ_P0029837 Gucy2e protein_coding protein_coding MGP_LPJ_T0029838.1 MGP_LPJ_G0018431.1 mouse_genomes_project 11 70210507 70229350 - MGP_LPJ_P0029838 Gucy2e protein_coding protein_coding MGP_LPJ_T0029839.1 MGP_LPJ_G0018431.1 mouse_genomes_project 11 70213542 70229365 - MGP_LPJ_P0029839 Gucy2e protein_coding protein_coding MGP_LPJ_T0029840.1 MGP_LPJ_G0018431.1 mouse_genomes_project 11 70219018 70229350 - Gucy2e protein_coding processed_transcript MGP_LPJ_T0032084.1 MGP_LPJ_G0018975.1 mouse_genomes_project 11 101796857 101809505 + Thra protein_coding processed_transcript MGP_LPJ_T0032085.1 MGP_LPJ_G0018975.1 mouse_genomes_project 11 101797020 101809765 + Thra protein_coding processed_transcript MGP_LPJ_T0032086.1 MGP_LPJ_G0018975.1 mouse_genomes_project 11 101797133 101809568 + Thra protein_coding processed_transcript MGP_LPJ_T0032087.1 MGP_LPJ_G0018975.1 mouse_genomes_project 11 101798040 101813785 + Thra protein_coding processed_transcript MGP_LPJ_T0032088.1 MGP_LPJ_G0018975.1 mouse_genomes_project 11 101798040 101825918 + MGP_LPJ_P0032088 Thra protein_coding protein_coding MGP_LPJ_T0032089.1 MGP_LPJ_G0018975.1 mouse_genomes_project 11 101798102 101822043 + MGP_LPJ_P0032089 Thra protein_coding protein_coding MGP_LPJ_T0032090.1 MGP_LPJ_G0018975.1 mouse_genomes_project 11 101798387 101813085 + MGP_LPJ_P0032090 Thra protein_coding protein_coding MGP_LPJ_T0032091.1 MGP_LPJ_G0018975.1 mouse_genomes_project 11 101800444 101809904 + Thra protein_coding processed_transcript MGP_LPJ_T0032092.1 MGP_LPJ_G0018975.1 mouse_genomes_project 11 101809712 101825305 + MGP_LPJ_P0032092 Thra protein_coding protein_coding MGP_LPJ_T0031683.1 MGP_LPJ_G0018873.1 mouse_genomes_project 11 97441088 97447276 - MGP_LPJ_P0031683 Tmem92 protein_coding protein_coding MGP_LPJ_T0031684.1 MGP_LPJ_G0018873.1 mouse_genomes_project 11 97441635 97447073 - MGP_LPJ_P0031684 Tmem92 protein_coding nonsense_mediated_decay MGP_LPJ_T0031685.1 MGP_LPJ_G0018873.1 mouse_genomes_project 11 97441635 97447073 - MGP_LPJ_P0031685 Tmem92 protein_coding protein_coding MGP_LPJ_T0033070.1 MGP_LPJ_G0019225.1 mouse_genomes_project 11 111597547 111666076 - MGP_LPJ_P0033070 Cacng4 protein_coding protein_coding MGP_LPJ_T0033071.1 MGP_LPJ_G0019225.1 mouse_genomes_project 11 111600379 111607181 - Cacng4 protein_coding processed_transcript MGP_LPJ_T0030910.1 MGP_LPJ_G0018676.1 mouse_genomes_project 11 79820048 79822953 + MGP_LPJ_P0030910 BC030499 protein_coding protein_coding MGP_LPJ_T0030911.1 MGP_LPJ_G0018676.1 mouse_genomes_project 11 79820099 79824550 + BC030499 protein_coding retained_intron MGP_LPJ_T0030912.1 MGP_LPJ_G0018676.1 mouse_genomes_project 11 79820101 79823026 + BC030499 protein_coding retained_intron MGP_LPJ_T0030913.1 MGP_LPJ_G0018676.1 mouse_genomes_project 11 79820108 79824028 + MGP_LPJ_P0030913 BC030499 protein_coding unknown_likely_coding MGP_LPJ_T0030914.1 MGP_LPJ_G0018676.1 mouse_genomes_project 11 79820136 79823041 + BC030499 protein_coding retained_intron MGP_LPJ_T0030915.1 MGP_LPJ_G0018676.1 mouse_genomes_project 11 79820763 79821371 + BC030499 protein_coding retained_intron MGP_LPJ_T0030916.1 MGP_LPJ_G0018676.1 mouse_genomes_project 11 79823014 79826013 + BC030499 protein_coding retained_intron MGP_LPJ_T0030999.1 MGP_LPJ_G0018699.1 mouse_genomes_project 11 80937528 81200406 + MGP_LPJ_P0030999 Nf1 protein_coding protein_coding MGP_LPJ_T0031000.1 MGP_LPJ_G0018699.1 mouse_genomes_project 11 80937561 81203488 + MGP_LPJ_P0031000 Nf1 protein_coding protein_coding MGP_LPJ_T0031001.1 MGP_LPJ_G0018699.1 mouse_genomes_project 11 80937623 81044510 + Nf1 protein_coding retained_intron MGP_LPJ_T0031002.1 MGP_LPJ_G0018699.1 mouse_genomes_project 11 80988321 81090894 + MGP_LPJ_P0031002 Nf1 protein_coding unknown_likely_coding MGP_LPJ_T0031003.1 MGP_LPJ_G0018699.1 mouse_genomes_project 11 80988559 81091744 + MGP_LPJ_P0031003 Nf1 protein_coding unknown_likely_coding MGP_LPJ_T0031004.1 MGP_LPJ_G0018699.1 mouse_genomes_project 11 81061802 81088298 + Nf1 protein_coding processed_transcript MGP_LPJ_T0031005.1 MGP_LPJ_G0018699.1 mouse_genomes_project 11 81061802 81088298 + Nf1 protein_coding processed_transcript MGP_LPJ_T0031015.1 MGP_LPJ_G0018699.1 mouse_genomes_project 11 81157057 81190277 + Nf1 protein_coding retained_intron MGP_LPJ_T0031016.1 MGP_LPJ_G0018699.1 mouse_genomes_project 11 81166451 81201512 + MGP_LPJ_P0031016 Nf1 protein_coding protein_coding MGP_LPJ_T0029851.1 MGP_LPJ_G0018433.1 mouse_genomes_project 11 70316076 70317890 + MGP_LPJ_P0029851 Trappc1 protein_coding protein_coding MGP_LPJ_T0029852.1 MGP_LPJ_G0018433.1 mouse_genomes_project 11 70316159 70317890 + MGP_LPJ_P0029852 Trappc1 protein_coding protein_coding MGP_LPJ_T0029853.1 MGP_LPJ_G0018433.1 mouse_genomes_project 11 70316171 70317890 + MGP_LPJ_P0029853 Trappc1 protein_coding protein_coding MGP_LPJ_T0029854.1 MGP_LPJ_G0018433.1 mouse_genomes_project 11 70316253 70317890 + MGP_LPJ_P0029854 Trappc1 protein_coding protein_coding MGP_LPJ_T0029855.1 MGP_LPJ_G0018433.1 mouse_genomes_project 11 70316534 70317329 + Trappc1 protein_coding processed_transcript MGP_LPJ_T0032108.1 MGP_LPJ_G0018980.1 mouse_genomes_project 11 101935471 101967042 + MGP_LPJ_P0032108 Wipf2 protein_coding protein_coding MGP_LPJ_T0032109.1 MGP_LPJ_G0018980.1 mouse_genomes_project 11 101935471 101982358 + MGP_LPJ_P0032109 Wipf2 protein_coding protein_coding MGP_LPJ_T0032110.1 MGP_LPJ_G0018980.1 mouse_genomes_project 11 101935965 101967583 + Wipf2 protein_coding retained_intron MGP_LPJ_T0032111.1 MGP_LPJ_G0018980.1 mouse_genomes_project 11 101965915 101966840 + Wipf2 protein_coding retained_intron MGP_LPJ_T0032924.1 MGP_LPJ_G0019192.1 mouse_genomes_project 11 109731337 109752199 + MGP_LPJ_P0032924 Kcnh6 protein_coding protein_coding MGP_LPJ_T0032925.1 MGP_LPJ_G0019192.1 mouse_genomes_project 11 109731386 109752641 + MGP_LPJ_P0032925 Kcnh6 protein_coding protein_coding MGP_LPJ_T0032926.1 MGP_LPJ_G0019192.1 mouse_genomes_project 11 109731416 109752156 + MGP_LPJ_P0032926 Kcnh6 protein_coding nonsense_mediated_decay MGP_LPJ_T0032927.1 MGP_LPJ_G0019192.1 mouse_genomes_project 11 109736986 109740686 + Kcnh6 protein_coding processed_transcript MGP_LPJ_T0033072.1 MGP_LPJ_G0019226.1 mouse_genomes_project 11 111749075 111789214 - MGP_LPJ_P0033072 Cacng5 protein_coding protein_coding MGP_LPJ_T0033073.1 MGP_LPJ_G0019226.1 mouse_genomes_project 11 111749141 111792925 - MGP_LPJ_P0033073 Cacng5 protein_coding protein_coding MGP_LPJ_T0032605.1 MGP_LPJ_G0019128.1 mouse_genomes_project 11 105725244 105741626 + MGP_LPJ_P0032605 BC030867 protein_coding nonsense_mediated_decay MGP_LPJ_T0032606.1 MGP_LPJ_G0019128.1 mouse_genomes_project 11 105725244 105741626 + MGP_LPJ_P0032606 BC030867 protein_coding protein_coding MGP_LPJ_T0032607.1 MGP_LPJ_G0019128.1 mouse_genomes_project 11 105732074 105737035 + BC030867 protein_coding processed_transcript MGP_LPJ_T0032608.1 MGP_LPJ_G0019128.1 mouse_genomes_project 11 105732078 105737033 + BC030867 protein_coding processed_transcript MGP_LPJ_T0032609.1 MGP_LPJ_G0019128.1 mouse_genomes_project 11 105738380 105741626 + BC030867 protein_coding processed_transcript MGP_LPJ_T0012482.1 MGP_LPJ_G0010573.1 mouse_genomes_project 11 12195365 12195962 + processed_pseudogene processed_pseudogene MGP_LPJ_T0030339.1 MGP_LPJ_G0018531.1 mouse_genomes_project 11 72860364 72870555 + MGP_LPJ_P0030339 Wscd1 protein_coding protein_coding MGP_LPJ_T0030340.1 MGP_LPJ_G0018531.1 mouse_genomes_project 11 72861129 72901153 + MGP_LPJ_P0030340 Wscd1 protein_coding protein_coding MGP_LPJ_T0030341.1 MGP_LPJ_G0018531.1 mouse_genomes_project 11 72861424 72901153 + MGP_LPJ_P0030341 Wscd1 protein_coding protein_coding MGP_LPJ_T0030342.1 MGP_LPJ_G0018531.1 mouse_genomes_project 11 72861820 72871411 + Wscd1 protein_coding retained_intron MGP_LPJ_T0030343.1 MGP_LPJ_G0018531.1 mouse_genomes_project 11 72861820 72901153 + MGP_LPJ_P0030343 Wscd1 protein_coding protein_coding MGP_LPJ_T0030344.1 MGP_LPJ_G0018531.1 mouse_genomes_project 11 72879118 72896791 + Wscd1 protein_coding processed_transcript MGP_LPJ_T0028703.1 MGP_LPJ_G0018132.1 mouse_genomes_project 11 48738130 48738720 + MGP_LPJ_P0028703 protein_coding protein_coding MGP_LPJ_T0009788.1 MGP_LPJ_G0007906.1 mouse_genomes_project 11 125030238 125030376 + miRNA miRNA MGP_LPJ_T0009716.1 MGP_LPJ_G0007834.1 mouse_genomes_project 11 71324956 71325040 + Mir497 miRNA miRNA MGP_LPJ_T0031009.1 MGP_LPJ_G0018702.1 mouse_genomes_project 11 81132072 81143921 - MGP_LPJ_P0031009 protein_coding protein_coding MGP_LPJ_T0032830.1 MGP_LPJ_G0019172.1 mouse_genomes_project 11 107570613 107590091 + MGP_LPJ_P0032830 Arf2 protein_coding protein_coding MGP_LPJ_T0032831.1 MGP_LPJ_G0019172.1 mouse_genomes_project 11 107570745 107590091 + MGP_LPJ_P0032831 Arf2 protein_coding protein_coding MGP_LPJ_T0032832.1 MGP_LPJ_G0019172.1 mouse_genomes_project 11 107576849 107586652 + Arf2 protein_coding retained_intron MGP_LPJ_T0032833.1 MGP_LPJ_G0019172.1 mouse_genomes_project 11 107584342 107588381 + MGP_LPJ_P0032833 Arf2 protein_coding protein_coding MGP_LPJ_T0027914.1 MGP_LPJ_G0017935.1 mouse_genomes_project 11 3716423 3730821 - MGP_LPJ_P0027914 Myo1g protein_coding protein_coding MGP_LPJ_T0027915.1 MGP_LPJ_G0017935.1 mouse_genomes_project 11 3716549 3730760 - MGP_LPJ_P0027915 Myo1g protein_coding nonsense_mediated_decay MGP_LPJ_T0027916.1 MGP_LPJ_G0017935.1 mouse_genomes_project 11 3717744 3718561 - Myo1g protein_coding retained_intron MGP_LPJ_T0027917.1 MGP_LPJ_G0017935.1 mouse_genomes_project 11 3722839 3730821 - Myo1g protein_coding retained_intron MGP_LPJ_T0027918.1 MGP_LPJ_G0017935.1 mouse_genomes_project 11 3724378 3725376 - Myo1g protein_coding retained_intron MGP_LPJ_T0027919.1 MGP_LPJ_G0017935.1 mouse_genomes_project 11 3727877 3730828 - MGP_LPJ_P0027919 Myo1g protein_coding nonsense_mediated_decay MGP_LPJ_T0027920.1 MGP_LPJ_G0017935.1 mouse_genomes_project 11 3728929 3729387 - MGP_LPJ_P0027920 Myo1g protein_coding protein_coding MGP_LPJ_T0017133.1 MGP_LPJ_G0015087.1 mouse_genomes_project 11 59612121 59614726 - 2610507I01Rik processed_transcript processed_transcript MGP_LPJ_T0098891.1 MGP_LPJ_G0037154.1 mouse_genomes_project 11 21336361 21336468 - Gm22753 snRNA snRNA MGP_LPJ_T0012768.1 MGP_LPJ_G0010859.1 mouse_genomes_project 11 119299724 119300128 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100149.1 MGP_LPJ_G0038412.1 mouse_genomes_project 11 61301671 61301797 + Gm24945 snoRNA snoRNA MGP_LPJ_T0006371.1 MGP_LPJ_G0005312.1 mouse_genomes_project 11 116983865 116990644 - Gm11681 lincRNA lincRNA MGP_LPJ_T0030917.1 MGP_LPJ_G0018677.1 mouse_genomes_project 11 79830872 79852847 + MGP_LPJ_P0030917 Spag5 protein_coding protein_coding MGP_LPJ_T0030918.1 MGP_LPJ_G0018677.1 mouse_genomes_project 11 79830967 79845664 + Spag5 protein_coding retained_intron MGP_LPJ_T0030919.1 MGP_LPJ_G0018677.1 mouse_genomes_project 11 79830998 79845337 + Spag5 protein_coding retained_intron MGP_LPJ_T0030920.1 MGP_LPJ_G0018677.1 mouse_genomes_project 11 79843588 79844558 + Spag5 protein_coding retained_intron MGP_LPJ_T0030921.1 MGP_LPJ_G0018677.1 mouse_genomes_project 11 79845830 79846431 + Spag5 protein_coding retained_intron MGP_LPJ_T0030922.1 MGP_LPJ_G0018677.1 mouse_genomes_project 11 79846289 79850288 + Spag5 protein_coding retained_intron MGP_LPJ_T0030923.1 MGP_LPJ_G0018677.1 mouse_genomes_project 11 79848351 79850765 + Spag5 protein_coding processed_transcript MGP_LPJ_T0030924.1 MGP_LPJ_G0018677.1 mouse_genomes_project 11 79850315 79851130 + Spag5 protein_coding retained_intron MGP_LPJ_T0027827.1 MGP_LPJ_G0017912.1 mouse_genomes_project 11 2666421 2681380 - MGP_LPJ_P0027827 Ccdc117 protein_coding protein_coding MGP_LPJ_T0033439.1 MGP_LPJ_G0019304.1 mouse_genomes_project 11 120275140 120312315 + MGP_LPJ_P0033439 Llgl2 protein_coding protein_coding MGP_LPJ_T0033440.1 MGP_LPJ_G0019304.1 mouse_genomes_project 11 120275149 120296603 + MGP_LPJ_P0033440 Llgl2 protein_coding protein_coding MGP_LPJ_T0033441.1 MGP_LPJ_G0019304.1 mouse_genomes_project 11 120275149 120312313 + MGP_LPJ_P0033441 Llgl2 protein_coding protein_coding MGP_LPJ_T0033442.1 MGP_LPJ_G0019304.1 mouse_genomes_project 11 120283127 120296045 + MGP_LPJ_P0033442 Llgl2 protein_coding protein_coding MGP_LPJ_T0033443.1 MGP_LPJ_G0019304.1 mouse_genomes_project 11 120285084 120296550 + MGP_LPJ_P0033443 Llgl2 protein_coding protein_coding MGP_LPJ_T0033444.1 MGP_LPJ_G0019304.1 mouse_genomes_project 11 120285473 120296610 + MGP_LPJ_P0033444 Llgl2 protein_coding protein_coding MGP_LPJ_T0033445.1 MGP_LPJ_G0019304.1 mouse_genomes_project 11 120285482 120296638 + MGP_LPJ_P0033445 Llgl2 protein_coding protein_coding MGP_LPJ_T0033446.1 MGP_LPJ_G0019304.1 mouse_genomes_project 11 120309786 120310854 + Llgl2 protein_coding retained_intron MGP_LPJ_T0033447.1 MGP_LPJ_G0019304.1 mouse_genomes_project 11 120310270 120311393 + Llgl2 protein_coding processed_transcript MGP_LPJ_T0033448.1 MGP_LPJ_G0019304.1 mouse_genomes_project 11 120310337 120312315 + MGP_LPJ_P0033448 Llgl2 protein_coding protein_coding MGP_LPJ_T0033449.1 MGP_LPJ_G0019304.1 mouse_genomes_project 11 120310766 120312119 + Llgl2 protein_coding retained_intron MGP_LPJ_T0033450.1 MGP_LPJ_G0019304.1 mouse_genomes_project 11 120311567 120312315 + Llgl2 protein_coding retained_intron MGP_LPJ_T0003160.1 MGP_LPJ_G0002933.1 mouse_genomes_project 11 32292457 32298291 + Gm12120 antisense antisense MGP_LPJ_T0031928.1 MGP_LPJ_G0018938.1 mouse_genomes_project 11 100581802 100584116 - MGP_LPJ_P0031928 E130012A19Rik protein_coding protein_coding MGP_LPJ_T0029091.1 MGP_LPJ_G0018237.1 mouse_genomes_project 11 55127208 55156353 - MGP_LPJ_P0029091 Slc36a2 protein_coding protein_coding MGP_LPJ_T0029092.1 MGP_LPJ_G0018237.1 mouse_genomes_project 11 55137582 55156353 - Slc36a2 protein_coding processed_transcript MGP_LPJ_T0032219.1 MGP_LPJ_G0019046.1 mouse_genomes_project 11 103495378 103498247 - Krt14 protein_coding processed_transcript MGP_LPJ_T0032220.1 MGP_LPJ_G0019046.1 mouse_genomes_project 11 103495378 103499741 - MGP_LPJ_P0032220 Krt14 protein_coding protein_coding MGP_LPJ_T0101477.1 MGP_LPJ_G0039625.1 mouse_genomes_project 11 31265 34352 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0012623.1 MGP_LPJ_G0010714.1 mouse_genomes_project 11 60820685 60821647 + processed_pseudogene processed_pseudogene MGP_LPJ_T0033116.1 MGP_LPJ_G0019235.1 mouse_genomes_project 11 113393486 113407438 + MGP_LPJ_P0033116 Amz2 protein_coding protein_coding MGP_LPJ_T0033117.1 MGP_LPJ_G0019235.1 mouse_genomes_project 11 113393516 113424008 + MGP_LPJ_P0033117 Amz2 protein_coding protein_coding MGP_LPJ_T0033118.1 MGP_LPJ_G0019235.1 mouse_genomes_project 11 113393522 113400381 + Amz2 protein_coding retained_intron MGP_LPJ_T0033119.1 MGP_LPJ_G0019235.1 mouse_genomes_project 11 113393764 113406282 + MGP_LPJ_P0033119 Amz2 protein_coding protein_coding MGP_LPJ_T0033120.1 MGP_LPJ_G0019235.1 mouse_genomes_project 11 113402035 113403915 + Amz2 protein_coding processed_transcript MGP_LPJ_T0033121.1 MGP_LPJ_G0019235.1 mouse_genomes_project 11 113403069 113404020 + Amz2 protein_coding retained_intron MGP_LPJ_T0033122.1 MGP_LPJ_G0019235.1 mouse_genomes_project 11 113403282 113406541 + Amz2 protein_coding processed_transcript MGP_LPJ_T0033123.1 MGP_LPJ_G0019235.1 mouse_genomes_project 11 113410957 113424449 + Amz2 protein_coding processed_transcript MGP_LPJ_T0003195.1 MGP_LPJ_G0002965.1 mouse_genomes_project 11 57749356 57772059 - 4933424L21Rik antisense antisense MGP_LPJ_T0098918.1 MGP_LPJ_G0037181.1 mouse_genomes_project 11 76034543 76034650 + Gm24211 snRNA snRNA MGP_LPJ_T0032585.1 MGP_LPJ_G0019127.1 mouse_genomes_project 11 105668897 105704358 - MGP_LPJ_P0032585 Hdac5 protein_coding protein_coding MGP_LPJ_T0032586.1 MGP_LPJ_G0019127.1 mouse_genomes_project 11 105670209 105704316 - MGP_LPJ_P0032586 Hdac5 protein_coding protein_coding MGP_LPJ_T0032587.1 MGP_LPJ_G0019127.1 mouse_genomes_project 11 105670212 105671651 - Hdac5 protein_coding retained_intron MGP_LPJ_T0032588.1 MGP_LPJ_G0019127.1 mouse_genomes_project 11 105670214 105672334 - Hdac5 protein_coding retained_intron MGP_LPJ_T0032589.1 MGP_LPJ_G0019127.1 mouse_genomes_project 11 105670214 105693088 - Hdac5 protein_coding retained_intron MGP_LPJ_T0032590.1 MGP_LPJ_G0019127.1 mouse_genomes_project 11 105670214 105671024 - Hdac5 protein_coding retained_intron MGP_LPJ_T0032591.1 MGP_LPJ_G0019127.1 mouse_genomes_project 11 105670214 105671034 - MGP_LPJ_P0032591 Hdac5 protein_coding protein_coding MGP_LPJ_T0032592.1 MGP_LPJ_G0019127.1 mouse_genomes_project 11 105670214 105704331 - MGP_LPJ_P0032592 Hdac5 protein_coding nonsense_mediated_decay MGP_LPJ_T0032593.1 MGP_LPJ_G0019127.1 mouse_genomes_project 11 105670216 105704328 - MGP_LPJ_P0032593 Hdac5 protein_coding protein_coding MGP_LPJ_T0032594.1 MGP_LPJ_G0019127.1 mouse_genomes_project 11 105670216 105704358 - MGP_LPJ_P0032594 Hdac5 protein_coding protein_coding MGP_LPJ_T0032595.1 MGP_LPJ_G0019127.1 mouse_genomes_project 11 105670702 105672545 - Hdac5 protein_coding retained_intron MGP_LPJ_T0032596.1 MGP_LPJ_G0019127.1 mouse_genomes_project 11 105671146 105673361 - Hdac5 protein_coding retained_intron MGP_LPJ_T0032597.1 MGP_LPJ_G0019127.1 mouse_genomes_project 11 105673144 105673959 - Hdac5 protein_coding retained_intron MGP_LPJ_T0032598.1 MGP_LPJ_G0019127.1 mouse_genomes_project 11 105673429 105674823 - Hdac5 protein_coding retained_intron MGP_LPJ_T0032599.1 MGP_LPJ_G0019127.1 mouse_genomes_project 11 105673855 105675282 - Hdac5 protein_coding retained_intron MGP_LPJ_T0032600.1 MGP_LPJ_G0019127.1 mouse_genomes_project 11 105680355 105704334 - MGP_LPJ_P0032600 Hdac5 protein_coding protein_coding MGP_LPJ_T0032601.1 MGP_LPJ_G0019127.1 mouse_genomes_project 11 105681096 105693087 - MGP_LPJ_P0032601 Hdac5 protein_coding protein_coding MGP_LPJ_T0032602.1 MGP_LPJ_G0019127.1 mouse_genomes_project 11 105681472 105693088 - Hdac5 protein_coding retained_intron MGP_LPJ_T0032603.1 MGP_LPJ_G0019127.1 mouse_genomes_project 11 105692869 105704325 - Hdac5 protein_coding processed_transcript MGP_LPJ_T0032604.1 MGP_LPJ_G0019127.1 mouse_genomes_project 11 105693311 105704338 - Hdac5 protein_coding processed_transcript MGP_LPJ_T0006381.1 MGP_LPJ_G0005318.1 mouse_genomes_project 11 118542712 118551628 + lincRNA lincRNA MGP_LPJ_T0028567.1 MGP_LPJ_G0018092.1 mouse_genomes_project 11 43713313 44116469 + MGP_LPJ_P0028567 Ebf1 protein_coding protein_coding MGP_LPJ_T0028568.1 MGP_LPJ_G0018092.1 mouse_genomes_project 11 43713313 44117003 + MGP_LPJ_P0028568 Ebf1 protein_coding protein_coding MGP_LPJ_T0028569.1 MGP_LPJ_G0018092.1 mouse_genomes_project 11 43713313 44119566 + MGP_LPJ_P0028569 Ebf1 protein_coding protein_coding MGP_LPJ_T0028570.1 MGP_LPJ_G0018092.1 mouse_genomes_project 11 43713880 43742676 + Ebf1 protein_coding processed_transcript MGP_LPJ_T0028571.1 MGP_LPJ_G0018092.1 mouse_genomes_project 11 43713943 43739287 + Ebf1 protein_coding processed_transcript MGP_LPJ_T0028572.1 MGP_LPJ_G0018092.1 mouse_genomes_project 11 43717537 43739277 + Ebf1 protein_coding processed_transcript MGP_LPJ_T0028573.1 MGP_LPJ_G0018092.1 mouse_genomes_project 11 44023879 44084392 + Ebf1 protein_coding processed_transcript MGP_LPJ_T0032176.1 MGP_LPJ_G0019010.1 mouse_genomes_project 11 102759305 102760402 - MGP_LPJ_P0032176 Krtap2-4 protein_coding protein_coding MGP_LPJ_T0006193.1 MGP_LPJ_G0005171.1 mouse_genomes_project 11 4528511 4549762 - Gm11986 lincRNA lincRNA MGP_LPJ_T0031770.1 MGP_LPJ_G0018896.1 mouse_genomes_project 11 98674677 98727019 - MGP_LPJ_P0031770 B4galnt2 protein_coding protein_coding MGP_LPJ_T0027890.1 MGP_LPJ_G0017929.1 mouse_genomes_project 11 3444652 3449162 - MGP_LPJ_P0027890 Tmed4 protein_coding protein_coding MGP_LPJ_T0027891.1 MGP_LPJ_G0017929.1 mouse_genomes_project 11 3445944 3449162 - Tmed4 protein_coding retained_intron MGP_LPJ_T0027892.1 MGP_LPJ_G0017929.1 mouse_genomes_project 11 3448032 3449157 - MGP_LPJ_P0027892 Tmed4 protein_coding protein_coding MGP_LPJ_T0032408.1 MGP_LPJ_G0019090.1 mouse_genomes_project 11 104640569 104646152 + MGP_LPJ_P0032408 Vps25 protein_coding protein_coding MGP_LPJ_T0032409.1 MGP_LPJ_G0019090.1 mouse_genomes_project 11 104640569 104647652 + MGP_LPJ_P0032409 Vps25 protein_coding protein_coding MGP_LPJ_T0032410.1 MGP_LPJ_G0019090.1 mouse_genomes_project 11 104640591 104647648 + MGP_LPJ_P0032410 Vps25 protein_coding protein_coding MGP_LPJ_T0032411.1 MGP_LPJ_G0019090.1 mouse_genomes_project 11 104640592 104647019 + MGP_LPJ_P0032411 Vps25 protein_coding nonsense_mediated_decay MGP_LPJ_T0032412.1 MGP_LPJ_G0019090.1 mouse_genomes_project 11 104640597 104647426 + MGP_LPJ_P0032412 Vps25 protein_coding protein_coding MGP_LPJ_T0032413.1 MGP_LPJ_G0019090.1 mouse_genomes_project 11 104640615 104647159 + MGP_LPJ_P0032413 Vps25 protein_coding protein_coding MGP_LPJ_T0032414.1 MGP_LPJ_G0019090.1 mouse_genomes_project 11 104640626 104647313 + Vps25 protein_coding retained_intron MGP_LPJ_T0028135.1 MGP_LPJ_G0017987.1 mouse_genomes_project 11 20325522 20336490 + MGP_LPJ_P0028135 Tmem17 protein_coding protein_coding MGP_LPJ_T0032611.1 MGP_LPJ_G0019130.1 mouse_genomes_project 11 105763044 105767349 + MGP_LPJ_P0032611 Tmub2 protein_coding protein_coding MGP_LPJ_T0032612.1 MGP_LPJ_G0019130.1 mouse_genomes_project 11 105763052 105766323 + Tmub2 protein_coding processed_transcript MGP_LPJ_T0032613.1 MGP_LPJ_G0019130.1 mouse_genomes_project 11 105763052 105767349 + MGP_LPJ_P0032613 Tmub2 protein_coding protein_coding MGP_LPJ_T0032614.1 MGP_LPJ_G0019130.1 mouse_genomes_project 11 105763064 105765503 + Tmub2 protein_coding processed_transcript MGP_LPJ_T0032615.1 MGP_LPJ_G0019130.1 mouse_genomes_project 11 105763309 105767349 + MGP_LPJ_P0032615 Tmub2 protein_coding protein_coding MGP_LPJ_T0101759.1 MGP_LPJ_G0039797.1 mouse_genomes_project 11 45723353 45723653 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0098933.1 MGP_LPJ_G0037196.1 mouse_genomes_project 11 89525004 89525168 + Gm22068 snRNA snRNA MGP_LPJ_T0101760.1 MGP_LPJ_G0039798.1 mouse_genomes_project 11 45840471 45840744 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0012659.1 MGP_LPJ_G0010750.1 mouse_genomes_project 11 74377555 74377930 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003265.1 MGP_LPJ_G0003023.1 mouse_genomes_project 11 84744405 84762728 - Slfn5os antisense antisense MGP_LPJ_T0003174.1 MGP_LPJ_G0002947.1 mouse_genomes_project 11 50277055 50282518 - Gm12200 antisense antisense MGP_LPJ_T0033459.1 MGP_LPJ_G0019306.1 mouse_genomes_project 11 120349166 120351708 - Recql5 protein_coding retained_intron MGP_LPJ_T0033460.1 MGP_LPJ_G0019306.1 mouse_genomes_project 11 120349166 120390312 - MGP_LPJ_P0033460 Recql5 protein_coding protein_coding MGP_LPJ_T0033461.1 MGP_LPJ_G0019306.1 mouse_genomes_project 11 120349166 120390312 - MGP_LPJ_P0033461 Recql5 protein_coding nonsense_mediated_decay MGP_LPJ_T0033462.1 MGP_LPJ_G0019306.1 mouse_genomes_project 11 120351986 120384222 - MGP_LPJ_P0033462 Recql5 protein_coding nonsense_mediated_decay MGP_LPJ_T0033463.1 MGP_LPJ_G0019306.1 mouse_genomes_project 11 120352836 120390312 - Recql5 protein_coding retained_intron MGP_LPJ_T0033464.1 MGP_LPJ_G0019306.1 mouse_genomes_project 11 120353380 120363815 - Recql5 protein_coding processed_transcript MGP_LPJ_T0033469.1 MGP_LPJ_G0019306.1 mouse_genomes_project 11 120371293 120390312 - MGP_LPJ_P0033469 Recql5 protein_coding nonsense_mediated_decay MGP_LPJ_T0033470.1 MGP_LPJ_G0019306.1 mouse_genomes_project 11 120382261 120384390 - Recql5 protein_coding retained_intron MGP_LPJ_T0031374.1 MGP_LPJ_G0018797.1 mouse_genomes_project 11 88756839 88822770 - MGP_LPJ_P0031374 Cltc protein_coding protein_coding MGP_LPJ_T0031375.1 MGP_LPJ_G0018797.1 mouse_genomes_project 11 88757143 88822706 - MGP_LPJ_P0031375 Cltc protein_coding protein_coding MGP_LPJ_T0031376.1 MGP_LPJ_G0018797.1 mouse_genomes_project 11 88757807 88766201 - MGP_LPJ_P0031376 Cltc protein_coding protein_coding MGP_LPJ_T0031377.1 MGP_LPJ_G0018797.1 mouse_genomes_project 11 88763442 88764935 - Cltc protein_coding processed_transcript MGP_LPJ_T0031378.1 MGP_LPJ_G0018797.1 mouse_genomes_project 11 88785481 88788715 - Cltc protein_coding retained_intron MGP_LPJ_T0031379.1 MGP_LPJ_G0018797.1 mouse_genomes_project 11 88786430 88788684 - Cltc protein_coding processed_transcript MGP_LPJ_T0033345.1 MGP_LPJ_G0019289.1 mouse_genomes_project 11 119848487 119856202 + MGP_LPJ_P0033345 Trim80 protein_coding protein_coding MGP_LPJ_T0030323.1 MGP_LPJ_G0018527.1 mouse_genomes_project 11 72169995 72182005 - MGP_LPJ_P0030323 Derl2 protein_coding protein_coding MGP_LPJ_T0030324.1 MGP_LPJ_G0018527.1 mouse_genomes_project 11 72173153 72181999 - MGP_LPJ_P0030324 Derl2 protein_coding protein_coding MGP_LPJ_T0030325.1 MGP_LPJ_G0018527.1 mouse_genomes_project 11 72173183 72182032 - MGP_LPJ_P0030325 Derl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0030326.1 MGP_LPJ_G0018527.1 mouse_genomes_project 11 72174954 72182006 - Derl2 protein_coding retained_intron MGP_LPJ_T0030327.1 MGP_LPJ_G0018527.1 mouse_genomes_project 11 72175883 72182038 - MGP_LPJ_P0030327 Derl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0030328.1 MGP_LPJ_G0018527.1 mouse_genomes_project 11 72177327 72181975 - MGP_LPJ_P0030328 Derl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0017132.1 MGP_LPJ_G0015086.1 mouse_genomes_project 11 59363383 59375657 - 2310058D17Rik processed_transcript processed_transcript MGP_LPJ_T0098952.1 MGP_LPJ_G0037215.1 mouse_genomes_project 11 109991241 109991349 + Gm23645 snRNA snRNA MGP_LPJ_T0032980.1 MGP_LPJ_G0019209.1 mouse_genomes_project 11 110112150 110117258 - MGP_LPJ_P0032980 Icam2 protein_coding protein_coding MGP_LPJ_T0032981.1 MGP_LPJ_G0019209.1 mouse_genomes_project 11 110113056 110115278 - MGP_LPJ_P0032981 Icam2 protein_coding protein_coding MGP_LPJ_T0032982.1 MGP_LPJ_G0019209.1 mouse_genomes_project 11 110113302 110122550 - MGP_LPJ_P0032982 Icam2 protein_coding protein_coding MGP_LPJ_T0032983.1 MGP_LPJ_G0019209.1 mouse_genomes_project 11 110115164 110122553 - MGP_LPJ_P0032983 Icam2 protein_coding protein_coding MGP_LPJ_T0032984.1 MGP_LPJ_G0019209.1 mouse_genomes_project 11 110115521 110117473 - Icam2 protein_coding retained_intron MGP_LPJ_T0003210.1 MGP_LPJ_G0002977.1 mouse_genomes_project 11 62037522 62038196 - B9d1os antisense antisense MGP_LPJ_T0006276.1 MGP_LPJ_G0005244.1 mouse_genomes_project 11 64847871 64866195 + Gm12290 lincRNA lincRNA MGP_LPJ_T0034007.1 MGP_LPJ_G0019416.1 mouse_genomes_project 11 125369312 125375551 - MGP_LPJ_P0034007 Alyref protein_coding protein_coding MGP_LPJ_T0034008.1 MGP_LPJ_G0019416.1 mouse_genomes_project 11 125371697 125372841 - Alyref protein_coding processed_transcript MGP_LPJ_T0034009.1 MGP_LPJ_G0019416.1 mouse_genomes_project 11 125372799 125375417 - Alyref protein_coding retained_intron MGP_LPJ_T0033846.1 MGP_LPJ_G0019384.1 mouse_genomes_project 11 124047923 124060128 - MGP_LPJ_P0033846 Sgsh protein_coding nonsense_mediated_decay MGP_LPJ_T0033847.1 MGP_LPJ_G0019384.1 mouse_genomes_project 11 124050746 124060156 - Sgsh protein_coding processed_transcript MGP_LPJ_T0033848.1 MGP_LPJ_G0019384.1 mouse_genomes_project 11 124050782 124060138 - MGP_LPJ_P0033848 Sgsh protein_coding protein_coding MGP_LPJ_T0033849.1 MGP_LPJ_G0019384.1 mouse_genomes_project 11 124050922 124052366 - Sgsh protein_coding processed_transcript MGP_LPJ_T0033850.1 MGP_LPJ_G0019384.1 mouse_genomes_project 11 124051303 124057432 - Sgsh protein_coding processed_transcript MGP_LPJ_T0029637.1 MGP_LPJ_G0018383.1 mouse_genomes_project 11 65880904 65889129 - MGP_LPJ_P0029637 1700086D15Rik protein_coding protein_coding MGP_LPJ_T0029638.1 MGP_LPJ_G0018383.1 mouse_genomes_project 11 65880904 65889128 - MGP_LPJ_P0029638 1700086D15Rik protein_coding protein_coding MGP_LPJ_T0031251.1 MGP_LPJ_G0018772.1 mouse_genomes_project 11 86374523 86473956 - MGP_LPJ_P0031251 Aatf protein_coding protein_coding MGP_LPJ_T0031252.1 MGP_LPJ_G0018772.1 mouse_genomes_project 11 86374551 86446647 - Aatf protein_coding processed_transcript MGP_LPJ_T0031253.1 MGP_LPJ_G0018772.1 mouse_genomes_project 11 86396328 86403418 - Aatf protein_coding retained_intron MGP_LPJ_T0031254.1 MGP_LPJ_G0018772.1 mouse_genomes_project 11 86420537 86473956 - Aatf protein_coding retained_intron MGP_LPJ_T0030532.1 MGP_LPJ_G0018598.1 mouse_genomes_project 11 75920869 75943998 + MGP_LPJ_P0030532 Ccdc92b protein_coding protein_coding MGP_LPJ_T0031087.1 MGP_LPJ_G0018718.1 mouse_genomes_project 11 82174176 82484821 - MGP_LPJ_P0031087 Myo1d protein_coding protein_coding MGP_LPJ_T0031088.1 MGP_LPJ_G0018718.1 mouse_genomes_project 11 82176276 82395388 - MGP_LPJ_P0031088 Myo1d protein_coding unknown_likely_coding MGP_LPJ_T0031089.1 MGP_LPJ_G0018718.1 mouse_genomes_project 11 82280077 82484821 - MGP_LPJ_P0031089 Myo1d protein_coding protein_coding MGP_LPJ_T0031090.1 MGP_LPJ_G0018718.1 mouse_genomes_project 11 82376750 82484799 - Myo1d protein_coding retained_intron MGP_LPJ_T0031995.1 MGP_LPJ_G0018954.1 mouse_genomes_project 11 101070031 101140741 - MGP_LPJ_P0031995 Fbxl20 protein_coding protein_coding MGP_LPJ_T0031996.1 MGP_LPJ_G0018954.1 mouse_genomes_project 11 101078456 101140735 - Fbxl20 protein_coding retained_intron MGP_LPJ_T0031997.1 MGP_LPJ_G0018954.1 mouse_genomes_project 11 101082284 101086981 - MGP_LPJ_P0031997 Fbxl20 protein_coding protein_coding MGP_LPJ_T0031998.1 MGP_LPJ_G0018954.1 mouse_genomes_project 11 101085339 101141530 - MGP_LPJ_P0031998 Fbxl20 protein_coding protein_coding MGP_LPJ_T0031999.1 MGP_LPJ_G0018954.1 mouse_genomes_project 11 101088661 101119457 - Fbxl20 protein_coding processed_transcript MGP_LPJ_T0032000.1 MGP_LPJ_G0018954.1 mouse_genomes_project 11 101096419 101119457 - MGP_LPJ_P0032000 Fbxl20 protein_coding protein_coding MGP_LPJ_T0032001.1 MGP_LPJ_G0018954.1 mouse_genomes_project 11 101118474 101119441 - Fbxl20 protein_coding processed_transcript MGP_LPJ_T0032020.1 MGP_LPJ_G0018959.1 mouse_genomes_project 11 101375332 101399440 + MGP_LPJ_P0032020 Stard3 protein_coding protein_coding MGP_LPJ_T0032021.1 MGP_LPJ_G0018959.1 mouse_genomes_project 11 101376971 101395177 + Stard3 protein_coding processed_transcript MGP_LPJ_T0032022.1 MGP_LPJ_G0018959.1 mouse_genomes_project 11 101376971 101399453 + Stard3 protein_coding processed_transcript MGP_LPJ_T0032023.1 MGP_LPJ_G0018959.1 mouse_genomes_project 11 101376971 101395172 + Stard3 protein_coding processed_transcript MGP_LPJ_T0032024.1 MGP_LPJ_G0018959.1 mouse_genomes_project 11 101393861 101396990 + Stard3 protein_coding processed_transcript MGP_LPJ_T0032025.1 MGP_LPJ_G0018959.1 mouse_genomes_project 11 101394788 101396571 + Stard3 protein_coding processed_transcript MGP_LPJ_T0032026.1 MGP_LPJ_G0018959.1 mouse_genomes_project 11 101396497 101397690 + Stard3 protein_coding processed_transcript MGP_LPJ_T0006220.1 MGP_LPJ_G0005196.1 mouse_genomes_project 11 23222108 23244768 + Gm12069 lincRNA lincRNA MGP_LPJ_T0031430.1 MGP_LPJ_G0018811.1 mouse_genomes_project 11 89735340 89777657 + MGP_LPJ_P0031430 Hsf5 protein_coding protein_coding MGP_LPJ_T0003190.1 MGP_LPJ_G0002961.1 mouse_genomes_project 11 55103559 55106523 + Slc36a3os antisense antisense MGP_LPJ_T0012668.1 MGP_LPJ_G0010759.1 mouse_genomes_project 11 77923996 77927308 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009752.1 MGP_LPJ_G0007870.1 mouse_genomes_project 11 100614866 100614937 - Gm24158 miRNA miRNA MGP_LPJ_T0006273.1 MGP_LPJ_G0005241.1 mouse_genomes_project 11 63361464 63364207 + Gm27194 lincRNA lincRNA MGP_LPJ_T0031398.1 MGP_LPJ_G0018806.1 mouse_genomes_project 11 89471956 89501439 - MGP_LPJ_P0031398 Rad51c protein_coding protein_coding MGP_LPJ_T0031399.1 MGP_LPJ_G0018806.1 mouse_genomes_project 11 89473888 89501422 - MGP_LPJ_P0031399 Rad51c protein_coding nonsense_mediated_decay MGP_LPJ_T0031400.1 MGP_LPJ_G0018806.1 mouse_genomes_project 11 89474394 89501870 - MGP_LPJ_P0031400 Rad51c protein_coding protein_coding MGP_LPJ_T0031401.1 MGP_LPJ_G0018806.1 mouse_genomes_project 11 89474681 89501348 - MGP_LPJ_P0031401 Rad51c protein_coding nonsense_mediated_decay MGP_LPJ_T0028359.1 MGP_LPJ_G0018037.1 mouse_genomes_project 11 30638503 30642073 + MGP_LPJ_P0028359 Snrnp25 protein_coding protein_coding MGP_LPJ_T0028360.1 MGP_LPJ_G0018037.1 mouse_genomes_project 11 30638534 30641497 + MGP_LPJ_P0028360 Snrnp25 protein_coding protein_coding MGP_LPJ_T0028361.1 MGP_LPJ_G0018037.1 mouse_genomes_project 11 30638546 30640740 + Snrnp25 protein_coding processed_transcript MGP_LPJ_T0028362.1 MGP_LPJ_G0018037.1 mouse_genomes_project 11 30638576 30641962 + MGP_LPJ_P0028362 Snrnp25 protein_coding protein_coding MGP_LPJ_T0028363.1 MGP_LPJ_G0018037.1 mouse_genomes_project 11 30639850 30642073 + Snrnp25 protein_coding retained_intron MGP_LPJ_T0030190.1 MGP_LPJ_G0018506.1 mouse_genomes_project 11 71637399 71638456 + Psmb6 protein_coding retained_intron MGP_LPJ_T0030191.1 MGP_LPJ_G0018506.1 mouse_genomes_project 11 71637418 71639681 + MGP_LPJ_P0030191 Psmb6 protein_coding protein_coding MGP_LPJ_T0030192.1 MGP_LPJ_G0018506.1 mouse_genomes_project 11 71638141 71639225 + Psmb6 protein_coding retained_intron MGP_LPJ_T0030193.1 MGP_LPJ_G0018506.1 mouse_genomes_project 11 71639103 71639890 + Psmb6 protein_coding retained_intron MGP_LPJ_T0029117.1 MGP_LPJ_G0018246.1 mouse_genomes_project 11 57580994 57618069 - MGP_LPJ_P0029117 Fam114a2 protein_coding protein_coding MGP_LPJ_T0029118.1 MGP_LPJ_G0018246.1 mouse_genomes_project 11 57581808 57618055 - MGP_LPJ_P0029118 Fam114a2 protein_coding protein_coding MGP_LPJ_T0029119.1 MGP_LPJ_G0018246.1 mouse_genomes_project 11 57604814 57606883 - Fam114a2 protein_coding processed_transcript MGP_LPJ_T0029120.1 MGP_LPJ_G0018246.1 mouse_genomes_project 11 57606829 57618054 - Fam114a2 protein_coding processed_transcript MGP_LPJ_T0033313.1 MGP_LPJ_G0019284.1 mouse_genomes_project 11 119746511 119766506 - MGP_LPJ_P0033313 Hid1 protein_coding protein_coding MGP_LPJ_T0033314.1 MGP_LPJ_G0019284.1 mouse_genomes_project 11 119746511 119766543 - MGP_LPJ_P0033314 Hid1 protein_coding protein_coding MGP_LPJ_T0033315.1 MGP_LPJ_G0019284.1 mouse_genomes_project 11 119747813 119749808 - Hid1 protein_coding processed_transcript MGP_LPJ_T0033316.1 MGP_LPJ_G0019284.1 mouse_genomes_project 11 119752917 119754179 - Hid1 protein_coding processed_transcript MGP_LPJ_T0033317.1 MGP_LPJ_G0019284.1 mouse_genomes_project 11 119754164 119766454 - MGP_LPJ_P0033317 Hid1 protein_coding protein_coding MGP_LPJ_T0033318.1 MGP_LPJ_G0019284.1 mouse_genomes_project 11 119755493 119759106 - Hid1 protein_coding processed_transcript MGP_LPJ_T0033319.1 MGP_LPJ_G0019284.1 mouse_genomes_project 11 119755588 119766396 - Hid1 protein_coding processed_transcript MGP_LPJ_T0033320.1 MGP_LPJ_G0019284.1 mouse_genomes_project 11 119757468 119758109 - Hid1 protein_coding processed_transcript MGP_LPJ_T0009738.1 MGP_LPJ_G0007856.1 mouse_genomes_project 11 86874419 86874486 + Gm23564 miRNA miRNA MGP_LPJ_T0033688.1 MGP_LPJ_G0019348.1 mouse_genomes_project 11 121747329 121932446 + MGP_LPJ_P0033688 Sept9 protein_coding protein_coding MGP_LPJ_T0033689.1 MGP_LPJ_G0019348.1 mouse_genomes_project 11 121790324 121932434 + MGP_LPJ_P0033689 Sept9 protein_coding protein_coding MGP_LPJ_T0033690.1 MGP_LPJ_G0019348.1 mouse_genomes_project 11 121827061 121932441 + MGP_LPJ_P0033690 Sept9 protein_coding protein_coding MGP_LPJ_T0033691.1 MGP_LPJ_G0019348.1 mouse_genomes_project 11 121874740 121922330 + MGP_LPJ_P0033691 Sept9 protein_coding protein_coding MGP_LPJ_T0033692.1 MGP_LPJ_G0019348.1 mouse_genomes_project 11 121893024 121926494 + MGP_LPJ_P0033692 Sept9 protein_coding protein_coding MGP_LPJ_T0033693.1 MGP_LPJ_G0019348.1 mouse_genomes_project 11 121900963 121931747 + Sept9 protein_coding retained_intron MGP_LPJ_T0033694.1 MGP_LPJ_G0019348.1 mouse_genomes_project 11 121923297 121927117 + Sept9 protein_coding retained_intron MGP_LPJ_T0033695.1 MGP_LPJ_G0019348.1 mouse_genomes_project 11 121929477 121930984 + Sept9 protein_coding retained_intron MGP_LPJ_T0033720.1 MGP_LPJ_G0019355.1 mouse_genomes_project 11 122416323 122420095 + MGP_LPJ_P0033720 Syngr2 protein_coding nonsense_mediated_decay MGP_LPJ_T0033721.1 MGP_LPJ_G0019355.1 mouse_genomes_project 11 122416326 122420930 + MGP_LPJ_P0033721 Syngr2 protein_coding protein_coding MGP_LPJ_T0033722.1 MGP_LPJ_G0019355.1 mouse_genomes_project 11 122416335 122420939 + MGP_LPJ_P0033722 Syngr2 protein_coding protein_coding MGP_LPJ_T0033723.1 MGP_LPJ_G0019355.1 mouse_genomes_project 11 122418877 122419738 + MGP_LPJ_P0033723 Syngr2 protein_coding protein_coding MGP_LPJ_T0033724.1 MGP_LPJ_G0019355.1 mouse_genomes_project 11 122419610 122420032 + Syngr2 protein_coding retained_intron MGP_LPJ_T0009791.1 MGP_LPJ_G0007909.1 mouse_genomes_project 11 126214278 126214338 - Mir7236 miRNA miRNA MGP_LPJ_T0009779.1 MGP_LPJ_G0007897.1 mouse_genomes_project 11 121613992 121614102 + Mir6516 miRNA miRNA MGP_LPJ_T0031744.1 MGP_LPJ_G0018888.1 mouse_genomes_project 11 98284846 98289565 - MGP_LPJ_P0031744 Nxph3 protein_coding protein_coding MGP_LPJ_T0100145.1 MGP_LPJ_G0038408.1 mouse_genomes_project 11 55479540 55479680 + Gm22884 snoRNA snoRNA MGP_LPJ_T0029304.1 MGP_LPJ_G0018317.1 mouse_genomes_project 11 60292642 60331616 + Nt5m protein_coding processed_transcript MGP_LPJ_T0029305.1 MGP_LPJ_G0018317.1 mouse_genomes_project 11 60292642 60336051 + Nt5m protein_coding processed_transcript MGP_LPJ_T0029306.1 MGP_LPJ_G0018317.1 mouse_genomes_project 11 60301268 60331616 + MGP_LPJ_P0029306 Nt5m protein_coding protein_coding MGP_LPJ_T0029307.1 MGP_LPJ_G0018317.1 mouse_genomes_project 11 60301299 60331616 + Nt5m protein_coding processed_transcript MGP_LPJ_T0028157.1 MGP_LPJ_G0017994.1 mouse_genomes_project 11 20837159 20849743 + MGP_LPJ_P0028157 Fam161a protein_coding protein_coding MGP_LPJ_T0028158.1 MGP_LPJ_G0017994.1 mouse_genomes_project 11 20838069 20858952 + MGP_LPJ_P0028158 Fam161a protein_coding protein_coding MGP_LPJ_T0028159.1 MGP_LPJ_G0017994.1 mouse_genomes_project 11 20838093 20853259 + MGP_LPJ_P0028159 Fam161a protein_coding protein_coding MGP_LPJ_T0028160.1 MGP_LPJ_G0017994.1 mouse_genomes_project 11 20843002 20853249 + MGP_LPJ_P0028160 Fam161a protein_coding protein_coding MGP_LPJ_T0028161.1 MGP_LPJ_G0017994.1 mouse_genomes_project 11 20849976 20860250 + MGP_LPJ_P0028161 Fam161a protein_coding protein_coding MGP_LPJ_T0028162.1 MGP_LPJ_G0017994.1 mouse_genomes_project 11 20850062 20853248 + MGP_LPJ_P0028162 Fam161a protein_coding protein_coding MGP_LPJ_T0030382.1 MGP_LPJ_G0018543.1 mouse_genomes_project 11 73516334 73544504 - MGP_LPJ_P0030382 Smtnl2 protein_coding protein_coding MGP_LPJ_T0030383.1 MGP_LPJ_G0018543.1 mouse_genomes_project 11 73529816 73533051 - Smtnl2 protein_coding processed_transcript MGP_LPJ_T0030384.1 MGP_LPJ_G0018543.1 mouse_genomes_project 11 73531428 73532684 - Smtnl2 protein_coding processed_transcript MGP_LPJ_T0027635.1 MGP_LPJ_G0017871.1 mouse_genomes_project 11 489522 511250 - Smtn protein_coding processed_transcript MGP_LPJ_T0027636.1 MGP_LPJ_G0017871.1 mouse_genomes_project 11 489522 499935 - MGP_LPJ_P0027636 Smtn protein_coding protein_coding MGP_LPJ_T0027637.1 MGP_LPJ_G0017871.1 mouse_genomes_project 11 489522 511290 - MGP_LPJ_P0027637 Smtn protein_coding protein_coding MGP_LPJ_T0027638.1 MGP_LPJ_G0017871.1 mouse_genomes_project 11 489522 511290 - MGP_LPJ_P0027638 Smtn protein_coding protein_coding MGP_LPJ_T0027639.1 MGP_LPJ_G0017871.1 mouse_genomes_project 11 489522 509396 - MGP_LPJ_P0027639 Smtn protein_coding protein_coding MGP_LPJ_T0027640.1 MGP_LPJ_G0017871.1 mouse_genomes_project 11 489522 511237 - MGP_LPJ_P0027640 Smtn protein_coding protein_coding MGP_LPJ_T0027641.1 MGP_LPJ_G0017871.1 mouse_genomes_project 11 492537 494552 - Smtn protein_coding processed_transcript MGP_LPJ_T0027642.1 MGP_LPJ_G0017871.1 mouse_genomes_project 11 504457 512610 - MGP_LPJ_P0027642 Smtn protein_coding protein_coding MGP_LPJ_T0027643.1 MGP_LPJ_G0017871.1 mouse_genomes_project 11 504600 511249 - MGP_LPJ_P0027643 Smtn protein_coding protein_coding MGP_LPJ_T0027644.1 MGP_LPJ_G0017871.1 mouse_genomes_project 11 506811 511247 - Smtn protein_coding processed_transcript MGP_LPJ_T0029833.1 MGP_LPJ_G0018430.1 mouse_genomes_project 11 70175990 70189893 - MGP_LPJ_P0029833 Alox8 protein_coding protein_coding MGP_LPJ_T0029834.1 MGP_LPJ_G0018430.1 mouse_genomes_project 11 70177153 70189859 - MGP_LPJ_P0029834 Alox8 protein_coding protein_coding MGP_LPJ_T0029835.1 MGP_LPJ_G0018430.1 mouse_genomes_project 11 70181893 70189861 - Alox8 protein_coding retained_intron MGP_LPJ_T0029836.1 MGP_LPJ_G0018430.1 mouse_genomes_project 11 70183559 70189434 - Alox8 protein_coding retained_intron MGP_LPJ_T0030222.1 MGP_LPJ_G0018511.1 mouse_genomes_project 11 71762964 71765879 + MGP_LPJ_P0030222 Gp1ba protein_coding protein_coding MGP_LPJ_T0030223.1 MGP_LPJ_G0018511.1 mouse_genomes_project 11 71762986 71765663 + MGP_LPJ_P0030223 Gp1ba protein_coding protein_coding MGP_LPJ_T0028821.1 MGP_LPJ_G0018168.1 mouse_genomes_project 11 50543120 50546654 + MGP_LPJ_P0028821 Olfr1378 protein_coding protein_coding MGP_LPJ_T0030862.1 MGP_LPJ_G0018666.1 mouse_genomes_project 11 79609816 79674082 + MGP_LPJ_P0030862 Fam222b protein_coding protein_coding MGP_LPJ_T0030863.1 MGP_LPJ_G0018666.1 mouse_genomes_project 11 79609864 79673457 + MGP_LPJ_P0030863 Fam222b protein_coding protein_coding MGP_LPJ_T0030864.1 MGP_LPJ_G0018666.1 mouse_genomes_project 11 79631052 79674082 + MGP_LPJ_P0030864 Fam222b protein_coding protein_coding MGP_LPJ_T0028954.1 MGP_LPJ_G0018208.1 mouse_genomes_project 11 53357233 53372503 + MGP_LPJ_P0028954 Sept8 protein_coding protein_coding MGP_LPJ_T0028955.1 MGP_LPJ_G0018208.1 mouse_genomes_project 11 53357722 53381162 + MGP_LPJ_P0028955 Sept8 protein_coding protein_coding MGP_LPJ_T0028956.1 MGP_LPJ_G0018208.1 mouse_genomes_project 11 53357746 53386632 + MGP_LPJ_P0028956 Sept8 protein_coding protein_coding MGP_LPJ_T0028957.1 MGP_LPJ_G0018208.1 mouse_genomes_project 11 53357776 53381163 + MGP_LPJ_P0028957 Sept8 protein_coding protein_coding MGP_LPJ_T0028958.1 MGP_LPJ_G0018208.1 mouse_genomes_project 11 53357884 53378965 + MGP_LPJ_P0028958 Sept8 protein_coding protein_coding MGP_LPJ_T0028959.1 MGP_LPJ_G0018208.1 mouse_genomes_project 11 53357903 53378914 + MGP_LPJ_P0028959 Sept8 protein_coding protein_coding MGP_LPJ_T0028960.1 MGP_LPJ_G0018208.1 mouse_genomes_project 11 53370014 53375166 + Sept8 protein_coding processed_transcript MGP_LPJ_T0031680.1 MGP_LPJ_G0018871.1 mouse_genomes_project 11 97348563 97358373 - MGP_LPJ_P0031680 Gm11541 protein_coding protein_coding MGP_LPJ_T0031909.1 MGP_LPJ_G0018932.1 mouse_genomes_project 11 100245691 100260751 + MGP_LPJ_P0031909 protein_coding protein_coding MGP_LPJ_T0031910.1 MGP_LPJ_G0018932.1 mouse_genomes_project 11 100245883 100251599 + MGP_LPJ_P0031910 protein_coding protein_coding MGP_LPJ_T0017176.1 MGP_LPJ_G0015108.1 mouse_genomes_project 11 97330184 97340310 + Gm11542 processed_transcript processed_transcript MGP_LPJ_T0031707.1 MGP_LPJ_G0018880.1 mouse_genomes_project 11 97792939 97818812 - MGP_LPJ_P0031707 Itga3 protein_coding protein_coding MGP_LPJ_T0031708.1 MGP_LPJ_G0018880.1 mouse_genomes_project 11 97792939 97827408 - MGP_LPJ_P0031708 Itga3 protein_coding protein_coding MGP_LPJ_T0031709.1 MGP_LPJ_G0018880.1 mouse_genomes_project 11 97792939 97827495 - MGP_LPJ_P0031709 Itga3 protein_coding protein_coding MGP_LPJ_T0031710.1 MGP_LPJ_G0018880.1 mouse_genomes_project 11 97801687 97805720 - Itga3 protein_coding retained_intron MGP_LPJ_T0031711.1 MGP_LPJ_G0018880.1 mouse_genomes_project 11 97807789 97811997 - Itga3 protein_coding retained_intron MGP_LPJ_T0031712.1 MGP_LPJ_G0018880.1 mouse_genomes_project 11 97812888 97827491 - MGP_LPJ_P0031712 Itga3 protein_coding protein_coding MGP_LPJ_T0009678.1 MGP_LPJ_G0007796.1 mouse_genomes_project 11 31515320 31515410 - Gm26052 miRNA miRNA MGP_LPJ_T0028019.1 MGP_LPJ_G0017959.1 mouse_genomes_project 11 9630458 9868722 - MGP_LPJ_P0028019 Cobl protein_coding protein_coding MGP_LPJ_T0028020.1 MGP_LPJ_G0017959.1 mouse_genomes_project 11 9630526 9868875 - MGP_LPJ_P0028020 Cobl protein_coding protein_coding MGP_LPJ_T0028021.1 MGP_LPJ_G0017959.1 mouse_genomes_project 11 9630526 9868777 - MGP_LPJ_P0028021 Cobl protein_coding protein_coding MGP_LPJ_T0028022.1 MGP_LPJ_G0017959.1 mouse_genomes_project 11 9630528 9812792 - MGP_LPJ_P0028022 Cobl protein_coding protein_coding MGP_LPJ_T0028023.1 MGP_LPJ_G0017959.1 mouse_genomes_project 11 9630528 9868878 - MGP_LPJ_P0028023 Cobl protein_coding protein_coding MGP_LPJ_T0028024.1 MGP_LPJ_G0017959.1 mouse_genomes_project 11 9630961 9868718 - MGP_LPJ_P0028024 Cobl protein_coding nonsense_mediated_decay MGP_LPJ_T0028025.1 MGP_LPJ_G0017959.1 mouse_genomes_project 11 9661180 9771059 - MGP_LPJ_P0028025 Cobl protein_coding protein_coding MGP_LPJ_T0028026.1 MGP_LPJ_G0017959.1 mouse_genomes_project 11 9690578 9771007 - MGP_LPJ_P0028026 Cobl protein_coding protein_coding MGP_LPJ_T0028027.1 MGP_LPJ_G0017959.1 mouse_genomes_project 11 9700510 9868670 - Cobl protein_coding retained_intron MGP_LPJ_T0028028.1 MGP_LPJ_G0017959.1 mouse_genomes_project 11 9743036 9779297 - MGP_LPJ_P0028028 Cobl protein_coding protein_coding MGP_LPJ_T0029278.1 MGP_LPJ_G0018312.1 mouse_genomes_project 11 60032900 60034011 - MGP_LPJ_P0029278 Olfr223 protein_coding protein_coding MGP_LPJ_T0033540.1 MGP_LPJ_G0019320.1 mouse_genomes_project 11 120643918 120655323 - Acox1 protein_coding processed_transcript MGP_LPJ_T0033541.1 MGP_LPJ_G0019320.1 mouse_genomes_project 11 120643918 120672663 - MGP_LPJ_P0033541 Acox1 protein_coding protein_coding MGP_LPJ_T0033542.1 MGP_LPJ_G0019320.1 mouse_genomes_project 11 120643918 120672419 - MGP_LPJ_P0033542 Acox1 protein_coding protein_coding MGP_LPJ_T0033543.1 MGP_LPJ_G0019320.1 mouse_genomes_project 11 120643918 120662634 - MGP_LPJ_P0033543 Acox1 protein_coding protein_coding MGP_LPJ_T0033544.1 MGP_LPJ_G0019320.1 mouse_genomes_project 11 120647377 120653409 - Acox1 protein_coding processed_transcript MGP_LPJ_T0033545.1 MGP_LPJ_G0019320.1 mouse_genomes_project 11 120651914 120655473 - Acox1 protein_coding processed_transcript MGP_LPJ_T0033546.1 MGP_LPJ_G0019320.1 mouse_genomes_project 11 120662087 120672347 - Acox1 protein_coding processed_transcript MGP_LPJ_T0006264.1 MGP_LPJ_G0005233.1 mouse_genomes_project 11 59239981 59241124 + Gm12259 lincRNA lincRNA MGP_LPJ_T0034157.1 MGP_LPJ_G0019442.1 mouse_genomes_project 11 125959555 125961732 + MGP_LPJ_P0034157 Tex19.1 protein_coding protein_coding MGP_LPJ_T0034158.1 MGP_LPJ_G0019442.1 mouse_genomes_project 11 125959569 125960280 + MGP_LPJ_P0034158 Tex19.1 protein_coding protein_coding MGP_LPJ_T0003180.1 MGP_LPJ_G0002952.1 mouse_genomes_project 11 51958630 51961519 + Gm12207 antisense antisense MGP_LPJ_T0027944.1 MGP_LPJ_G0017939.1 mouse_genomes_project 11 3847130 3849115 - Wap protein_coding processed_transcript MGP_LPJ_T0027945.1 MGP_LPJ_G0017939.1 mouse_genomes_project 11 3847130 3849957 - MGP_LPJ_P0027945 Wap protein_coding protein_coding MGP_LPJ_T0027946.1 MGP_LPJ_G0017939.1 mouse_genomes_project 11 3847187 3849104 - Wap protein_coding processed_transcript MGP_LPJ_T0031529.1 MGP_LPJ_G0018840.1 mouse_genomes_project 11 92342755 92348938 + MGP_LPJ_P0031529 Tmem100 protein_coding protein_coding MGP_LPJ_T0006406.1 MGP_LPJ_G0005339.1 mouse_genomes_project 11 126659524 126659726 + Gm29513 lincRNA lincRNA MGP_LPJ_T0011814.1 MGP_LPJ_G0009929.1 mouse_genomes_project 11 75166141 75167078 + MGP_LPJ_P0011814 Olfr22-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_LPJ_T0031847.1 MGP_LPJ_G0018919.1 mouse_genomes_project 11 99792684 99805141 - MGP_LPJ_P0031847 Cdk5rap3 protein_coding nonsense_mediated_decay MGP_LPJ_T0031848.1 MGP_LPJ_G0018919.1 mouse_genomes_project 11 99792684 99805141 - MGP_LPJ_P0031848 Cdk5rap3 protein_coding protein_coding MGP_LPJ_T0031849.1 MGP_LPJ_G0018919.1 mouse_genomes_project 11 99793074 99794017 - Cdk5rap3 protein_coding retained_intron MGP_LPJ_T0031850.1 MGP_LPJ_G0018919.1 mouse_genomes_project 11 99799311 99800725 - Cdk5rap3 protein_coding retained_intron MGP_LPJ_T0031851.1 MGP_LPJ_G0018919.1 mouse_genomes_project 11 99799800 99805037 - MGP_LPJ_P0031851 Cdk5rap3 protein_coding protein_coding MGP_LPJ_T0031852.1 MGP_LPJ_G0018919.1 mouse_genomes_project 11 99799817 99804752 - MGP_LPJ_P0031852 Cdk5rap3 protein_coding protein_coding MGP_LPJ_T0031853.1 MGP_LPJ_G0018919.1 mouse_genomes_project 11 99799839 99805074 - MGP_LPJ_P0031853 Cdk5rap3 protein_coding nonsense_mediated_decay MGP_LPJ_T0031854.1 MGP_LPJ_G0018919.1 mouse_genomes_project 11 99800072 99805011 - MGP_LPJ_P0031854 Cdk5rap3 protein_coding protein_coding MGP_LPJ_T0031855.1 MGP_LPJ_G0018919.1 mouse_genomes_project 11 99800093 99805059 - MGP_LPJ_P0031855 Cdk5rap3 protein_coding nonsense_mediated_decay MGP_LPJ_T0031856.1 MGP_LPJ_G0018919.1 mouse_genomes_project 11 99800203 99805059 - MGP_LPJ_P0031856 Cdk5rap3 protein_coding protein_coding MGP_LPJ_T0031857.1 MGP_LPJ_G0018919.1 mouse_genomes_project 11 99800540 99805012 - Cdk5rap3 protein_coding retained_intron MGP_LPJ_T0030687.1 MGP_LPJ_G0018631.1 mouse_genomes_project 11 77498990 77646027 - Glod4 protein_coding retained_intron MGP_LPJ_T0030699.1 MGP_LPJ_G0018631.1 mouse_genomes_project 11 77607088 77646015 - MGP_LPJ_P0030699 Glod4 protein_coding protein_coding MGP_LPJ_T0030703.1 MGP_LPJ_G0018631.1 mouse_genomes_project 11 77619052 77646077 - MGP_LPJ_P0030703 Glod4 protein_coding protein_coding MGP_LPJ_T0030704.1 MGP_LPJ_G0018631.1 mouse_genomes_project 11 77619149 77646003 - MGP_LPJ_P0030704 Glod4 protein_coding nonsense_mediated_decay MGP_LPJ_T0030705.1 MGP_LPJ_G0018631.1 mouse_genomes_project 11 77619336 77645811 - MGP_LPJ_P0030705 Glod4 protein_coding protein_coding MGP_LPJ_T0030706.1 MGP_LPJ_G0018631.1 mouse_genomes_project 11 77634424 77645962 - MGP_LPJ_P0030706 Glod4 protein_coding protein_coding MGP_LPJ_T0030707.1 MGP_LPJ_G0018631.1 mouse_genomes_project 11 77635441 77641927 - Glod4 protein_coding retained_intron MGP_LPJ_T0030708.1 MGP_LPJ_G0018631.1 mouse_genomes_project 11 77635713 77646021 - MGP_LPJ_P0030708 Glod4 protein_coding nonsense_mediated_decay MGP_LPJ_T0030709.1 MGP_LPJ_G0018631.1 mouse_genomes_project 11 77638898 77645990 - MGP_LPJ_P0030709 Glod4 protein_coding protein_coding MGP_LPJ_T0031604.1 MGP_LPJ_G0018857.1 mouse_genomes_project 11 96907644 96943843 - MGP_LPJ_P0031604 Luc7l3 protein_coding protein_coding MGP_LPJ_T0031605.1 MGP_LPJ_G0018857.1 mouse_genomes_project 11 96910824 96943873 - MGP_LPJ_P0031605 Luc7l3 protein_coding protein_coding MGP_LPJ_T0031606.1 MGP_LPJ_G0018857.1 mouse_genomes_project 11 96910824 96916829 - MGP_LPJ_P0031606 Luc7l3 protein_coding protein_coding MGP_LPJ_T0031607.1 MGP_LPJ_G0018857.1 mouse_genomes_project 11 96910902 96943873 - MGP_LPJ_P0031607 Luc7l3 protein_coding protein_coding MGP_LPJ_T0031608.1 MGP_LPJ_G0018857.1 mouse_genomes_project 11 96910902 96943873 - MGP_LPJ_P0031608 Luc7l3 protein_coding protein_coding MGP_LPJ_T0031609.1 MGP_LPJ_G0018857.1 mouse_genomes_project 11 96911092 96912983 - MGP_LPJ_P0031609 Luc7l3 protein_coding nonsense_mediated_decay MGP_LPJ_T0031610.1 MGP_LPJ_G0018857.1 mouse_genomes_project 11 96912533 96943780 - MGP_LPJ_P0031610 Luc7l3 protein_coding nonsense_mediated_decay MGP_LPJ_T0031611.1 MGP_LPJ_G0018857.1 mouse_genomes_project 11 96916768 96917980 - Luc7l3 protein_coding retained_intron MGP_LPJ_T0031612.1 MGP_LPJ_G0018857.1 mouse_genomes_project 11 96916776 96918786 - Luc7l3 protein_coding processed_transcript MGP_LPJ_T0031613.1 MGP_LPJ_G0018857.1 mouse_genomes_project 11 96916817 96919987 - Luc7l3 protein_coding retained_intron MGP_LPJ_T0028328.1 MGP_LPJ_G0018029.1 mouse_genomes_project 11 29289338 29313650 - MGP_LPJ_P0028328 Erlec1 protein_coding protein_coding MGP_LPJ_T0028329.1 MGP_LPJ_G0018029.1 mouse_genomes_project 11 29290316 29307950 - MGP_LPJ_P0028329 Erlec1 protein_coding nonsense_mediated_decay MGP_LPJ_T0028330.1 MGP_LPJ_G0018029.1 mouse_genomes_project 11 29294392 29307566 - MGP_LPJ_P0028330 Erlec1 protein_coding nonsense_mediated_decay MGP_LPJ_T0028331.1 MGP_LPJ_G0018029.1 mouse_genomes_project 11 29302187 29307683 - Erlec1 protein_coding retained_intron MGP_LPJ_T0028332.1 MGP_LPJ_G0018029.1 mouse_genomes_project 11 29312510 29313755 - Erlec1 protein_coding processed_transcript MGP_LPJ_T0029207.1 MGP_LPJ_G0018287.1 mouse_genomes_project 11 59209749 59225342 + MGP_LPJ_P0029207 Gm12258 protein_coding protein_coding MGP_LPJ_T0029208.1 MGP_LPJ_G0018287.1 mouse_genomes_project 11 59209770 59213966 + Gm12258 protein_coding processed_transcript MGP_LPJ_T0009746.1 MGP_LPJ_G0007864.1 mouse_genomes_project 11 98780804 98780896 - Mir3063 miRNA miRNA MGP_LPJ_T0098935.1 MGP_LPJ_G0037198.1 mouse_genomes_project 11 89814160 89814260 - Gm25968 snRNA snRNA MGP_LPJ_T0030645.1 MGP_LPJ_G0018622.1 mouse_genomes_project 11 76976521 76997573 + MGP_LPJ_P0030645 Inpp5k protein_coding protein_coding MGP_LPJ_T0030646.1 MGP_LPJ_G0018622.1 mouse_genomes_project 11 76976562 76997565 + Inpp5k protein_coding retained_intron MGP_LPJ_T0030647.1 MGP_LPJ_G0018622.1 mouse_genomes_project 11 76976570 76980804 + Inpp5k protein_coding retained_intron MGP_LPJ_T0030648.1 MGP_LPJ_G0018622.1 mouse_genomes_project 11 76976588 76997567 + MGP_LPJ_P0030648 Inpp5k protein_coding nonsense_mediated_decay MGP_LPJ_T0030649.1 MGP_LPJ_G0018622.1 mouse_genomes_project 11 76986171 76995977 + Inpp5k protein_coding retained_intron MGP_LPJ_T0030650.1 MGP_LPJ_G0018622.1 mouse_genomes_project 11 76995486 76996432 + Inpp5k protein_coding processed_transcript MGP_LPJ_T0030651.1 MGP_LPJ_G0018622.1 mouse_genomes_project 11 76995546 76996565 + MGP_LPJ_P0030651 Inpp5k protein_coding protein_coding MGP_LPJ_T0030312.1 MGP_LPJ_G0018525.1 mouse_genomes_project 11 72133496 72139000 - MGP_LPJ_P0030312 C1qbp protein_coding protein_coding MGP_LPJ_T0030313.1 MGP_LPJ_G0018525.1 mouse_genomes_project 11 72133508 72134533 - C1qbp protein_coding retained_intron MGP_LPJ_T0030314.1 MGP_LPJ_G0018525.1 mouse_genomes_project 11 72136693 72138981 - C1qbp protein_coding retained_intron MGP_LPJ_T0012678.1 MGP_LPJ_G0010769.1 mouse_genomes_project 11 80116173 80117292 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009715.1 MGP_LPJ_G0007833.1 mouse_genomes_project 11 71324931 71325056 - Mir497b miRNA miRNA MGP_LPJ_T0006396.1 MGP_LPJ_G0005329.1 mouse_genomes_project 11 123749345 123753688 + Gm26508 lincRNA lincRNA MGP_LPJ_T0028710.1 MGP_LPJ_G0018139.1 mouse_genomes_project 11 48904948 48905833 + MGP_LPJ_P0028710 protein_coding protein_coding MGP_LPJ_T0012643.1 MGP_LPJ_G0010734.1 mouse_genomes_project 11 68997702 68998087 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098936.1 MGP_LPJ_G0037199.1 mouse_genomes_project 11 91172700 91172807 + Gm23507 snRNA snRNA MGP_LPJ_T0030500.1 MGP_LPJ_G0018584.1 mouse_genomes_project 11 75193746 75200704 - MGP_LPJ_P0030500 Olfr398 protein_coding protein_coding MGP_LPJ_T0030501.1 MGP_LPJ_G0018584.1 mouse_genomes_project 11 75193746 75194691 - MGP_LPJ_P0030501 Olfr398 protein_coding protein_coding MGP_LPJ_T0003334.1 MGP_LPJ_G0003077.1 mouse_genomes_project 11 109686386 109707851 - Gm11651 antisense antisense MGP_LPJ_T0003335.1 MGP_LPJ_G0003077.1 mouse_genomes_project 11 109692430 109707823 - Gm11651 antisense antisense MGP_LPJ_T0033507.1 MGP_LPJ_G0019315.1 mouse_genomes_project 11 120544014 120554207 - MGP_LPJ_P0033507 Wbp2 protein_coding protein_coding MGP_LPJ_T0033508.1 MGP_LPJ_G0019315.1 mouse_genomes_project 11 120544693 120554207 - MGP_LPJ_P0033508 Wbp2 protein_coding protein_coding MGP_LPJ_T0033509.1 MGP_LPJ_G0019315.1 mouse_genomes_project 11 120544838 120546926 - Wbp2 protein_coding processed_transcript MGP_LPJ_T0033510.1 MGP_LPJ_G0019315.1 mouse_genomes_project 11 120547269 120554207 - Wbp2 protein_coding processed_transcript MGP_LPJ_T0033511.1 MGP_LPJ_G0019315.1 mouse_genomes_project 11 120550341 120554184 - Wbp2 protein_coding processed_transcript MGP_LPJ_T0030803.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79261087 79365984 + MGP_LPJ_P0030803 Myo18a protein_coding protein_coding MGP_LPJ_T0030804.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79261132 79321621 + MGP_LPJ_P0030804 Myo18a protein_coding unknown_likely_coding MGP_LPJ_T0030805.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79261142 79279248 + Myo18a protein_coding retained_intron MGP_LPJ_T0030806.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79263456 79276459 + MGP_LPJ_P0030806 Myo18a protein_coding protein_coding MGP_LPJ_T0030807.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79264589 79365984 + MGP_LPJ_P0030807 Myo18a protein_coding protein_coding MGP_LPJ_T0030808.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79269996 79365984 + MGP_LPJ_P0030808 Myo18a protein_coding protein_coding MGP_LPJ_T0030809.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79276317 79365984 + MGP_LPJ_P0030809 Myo18a protein_coding protein_coding MGP_LPJ_T0030810.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79276317 79365984 + MGP_LPJ_P0030810 Myo18a protein_coding protein_coding MGP_LPJ_T0030811.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79276345 79365147 + MGP_LPJ_P0030811 Myo18a protein_coding protein_coding MGP_LPJ_T0030812.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79276345 79365146 + MGP_LPJ_P0030812 Myo18a protein_coding protein_coding MGP_LPJ_T0030813.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79276368 79364852 + MGP_LPJ_P0030813 Myo18a protein_coding protein_coding MGP_LPJ_T0030815.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79300387 79365841 + MGP_LPJ_P0030815 Myo18a protein_coding protein_coding MGP_LPJ_T0030816.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79300426 79311968 + MGP_LPJ_P0030816 Myo18a protein_coding protein_coding MGP_LPJ_T0030817.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79300439 79365984 + MGP_LPJ_P0030817 Myo18a protein_coding protein_coding MGP_LPJ_T0030818.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79300439 79365113 + MGP_LPJ_P0030818 Myo18a protein_coding protein_coding MGP_LPJ_T0030819.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79300464 79364841 + MGP_LPJ_P0030819 Myo18a protein_coding protein_coding MGP_LPJ_T0030820.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79300464 79365060 + MGP_LPJ_P0030820 Myo18a protein_coding protein_coding MGP_LPJ_T0030821.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79310913 79365984 + MGP_LPJ_P0030821 Myo18a protein_coding protein_coding MGP_LPJ_T0030822.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79324616 79327704 + Myo18a protein_coding processed_transcript MGP_LPJ_T0030823.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79338157 79341638 + Myo18a protein_coding processed_transcript MGP_LPJ_T0030824.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79341002 79344982 + Myo18a protein_coding retained_intron MGP_LPJ_T0030825.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79349554 79353460 + Myo18a protein_coding retained_intron MGP_LPJ_T0030826.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79350759 79353331 + Myo18a protein_coding retained_intron MGP_LPJ_T0030827.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79353869 79359366 + MGP_LPJ_P0030827 Myo18a protein_coding protein_coding MGP_LPJ_T0030828.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79357482 79365080 + Myo18a protein_coding retained_intron MGP_LPJ_T0030829.1 MGP_LPJ_G0018658.1 mouse_genomes_project 11 79360290 79365199 + Myo18a protein_coding processed_transcript MGP_LPJ_T0003329.1 MGP_LPJ_G0003072.1 mouse_genomes_project 11 106934786 106940180 + Arhgap27os2 antisense antisense MGP_LPJ_T0030218.1 MGP_LPJ_G0018510.1 mouse_genomes_project 11 71734578 71735606 + MGP_LPJ_P0030218 4930544D05Rik protein_coding protein_coding MGP_LPJ_T0030219.1 MGP_LPJ_G0018510.1 mouse_genomes_project 11 71734624 71735601 + 4930544D05Rik protein_coding retained_intron MGP_LPJ_T0030220.1 MGP_LPJ_G0018510.1 mouse_genomes_project 11 71734627 71735621 + MGP_LPJ_P0030220 4930544D05Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0030221.1 MGP_LPJ_G0018510.1 mouse_genomes_project 11 71734640 71735608 + MGP_LPJ_P0030221 4930544D05Rik protein_coding protein_coding MGP_LPJ_T0003246.1 MGP_LPJ_G0003006.1 mouse_genomes_project 11 76305829 76306551 - Gm28180 antisense antisense MGP_LPJ_T0031497.1 MGP_LPJ_G0018828.1 mouse_genomes_project 11 90573669 90974161 - MGP_LPJ_P0031497 Msi2 protein_coding protein_coding MGP_LPJ_T0031498.1 MGP_LPJ_G0018828.1 mouse_genomes_project 11 90578528 90974107 - MGP_LPJ_P0031498 Msi2 protein_coding protein_coding MGP_LPJ_T0031499.1 MGP_LPJ_G0018828.1 mouse_genomes_project 11 90601277 90842681 - Msi2 protein_coding retained_intron MGP_LPJ_T0031500.1 MGP_LPJ_G0018828.1 mouse_genomes_project 11 90724165 90974116 - Msi2 protein_coding retained_intron MGP_LPJ_T0031501.1 MGP_LPJ_G0018828.1 mouse_genomes_project 11 90842588 90975493 - MGP_LPJ_P0031501 Msi2 protein_coding protein_coding MGP_LPJ_T0031502.1 MGP_LPJ_G0018828.1 mouse_genomes_project 11 90940948 90974161 - MGP_LPJ_P0031502 Msi2 protein_coding protein_coding MGP_LPJ_T0031503.1 MGP_LPJ_G0018828.1 mouse_genomes_project 11 90968200 90974161 - Msi2 protein_coding processed_transcript MGP_LPJ_T0032358.1 MGP_LPJ_G0019078.1 mouse_genomes_project 11 104438001 104440118 + MGP_LPJ_P0032358 Hsd17b1 protein_coding protein_coding MGP_LPJ_T0032835.1 MGP_LPJ_G0019174.1 mouse_genomes_project 11 107798480 107800705 + MGP_LPJ_P0032835 Sppl2c protein_coding protein_coding MGP_LPJ_T0032836.1 MGP_LPJ_G0019174.1 mouse_genomes_project 11 107798480 107803831 + MGP_LPJ_P0032836 Sppl2c protein_coding protein_coding MGP_LPJ_T0030743.1 MGP_LPJ_G0018644.1 mouse_genomes_project 11 78411655 78412685 + Blmh protein_coding retained_intron MGP_LPJ_T0030744.1 MGP_LPJ_G0018644.1 mouse_genomes_project 11 78411665 78434372 + Blmh protein_coding retained_intron MGP_LPJ_T0030745.1 MGP_LPJ_G0018644.1 mouse_genomes_project 11 78411747 78433389 + MGP_LPJ_P0030745 Blmh protein_coding protein_coding MGP_LPJ_T0030746.1 MGP_LPJ_G0018644.1 mouse_genomes_project 11 78411777 78453722 + MGP_LPJ_P0030746 Blmh protein_coding nonsense_mediated_decay MGP_LPJ_T0030747.1 MGP_LPJ_G0018644.1 mouse_genomes_project 11 78411807 78454277 + MGP_LPJ_P0030747 Blmh protein_coding protein_coding MGP_LPJ_T0030748.1 MGP_LPJ_G0018644.1 mouse_genomes_project 11 78411973 78420828 + MGP_LPJ_P0030748 Blmh protein_coding protein_coding MGP_LPJ_T0030749.1 MGP_LPJ_G0018644.1 mouse_genomes_project 11 78411994 78418459 + MGP_LPJ_P0030749 Blmh protein_coding protein_coding MGP_LPJ_T0030750.1 MGP_LPJ_G0018644.1 mouse_genomes_project 11 78427761 78432426 + Blmh protein_coding processed_transcript MGP_LPJ_T0003262.1 MGP_LPJ_G0003021.1 mouse_genomes_project 11 83334561 83340694 + Gm11418 antisense antisense MGP_LPJ_T0033258.1 MGP_LPJ_G0019266.1 mouse_genomes_project 11 119254992 119269727 + MGP_LPJ_P0033258 Cd300a protein_coding protein_coding MGP_LPJ_T0033259.1 MGP_LPJ_G0019266.1 mouse_genomes_project 11 119254992 119269727 + MGP_LPJ_P0033259 Cd300a protein_coding protein_coding MGP_LPJ_T0033260.1 MGP_LPJ_G0019266.1 mouse_genomes_project 11 119255246 119258481 + Cd300a protein_coding processed_transcript MGP_LPJ_T0033938.1 MGP_LPJ_G0019399.1 mouse_genomes_project 11 125107760 125110273 + MGP_LPJ_P0033938 0610009L18Rik protein_coding protein_coding MGP_LPJ_T0030063.1 MGP_LPJ_G0018479.1 mouse_genomes_project 11 71056537 71065105 + MGP_LPJ_P0030063 Ctdnep1 protein_coding protein_coding MGP_LPJ_T0030064.1 MGP_LPJ_G0018479.1 mouse_genomes_project 11 71059307 71064616 + Ctdnep1 protein_coding retained_intron MGP_LPJ_T0030065.1 MGP_LPJ_G0018479.1 mouse_genomes_project 11 71064138 71065225 + Ctdnep1 protein_coding retained_intron MGP_LPJ_T0030066.1 MGP_LPJ_G0018479.1 mouse_genomes_project 11 71064158 71066109 + Ctdnep1 protein_coding processed_transcript MGP_LPJ_T0100120.1 MGP_LPJ_G0038383.1 mouse_genomes_project 11 3739140 3739273 - Snora9 snoRNA snoRNA MGP_LPJ_T0030370.1 MGP_LPJ_G0018539.1 mouse_genomes_project 11 73368685 73392996 - MGP_LPJ_P0030370 Slc13a5 protein_coding protein_coding MGP_LPJ_T0030371.1 MGP_LPJ_G0018539.1 mouse_genomes_project 11 73386685 73392996 - MGP_LPJ_P0030371 Slc13a5 protein_coding protein_coding MGP_LPJ_T0030372.1 MGP_LPJ_G0018539.1 mouse_genomes_project 11 73387990 73393605 - MGP_LPJ_P0030372 Slc13a5 protein_coding protein_coding MGP_LPJ_T0032872.1 MGP_LPJ_G0019181.1 mouse_genomes_project 11 108323783 108405861 + MGP_LPJ_P0032872 protein_coding protein_coding MGP_LPJ_T0032873.1 MGP_LPJ_G0019181.1 mouse_genomes_project 11 108348165 108370327 + protein_coding processed_transcript MGP_LPJ_T0012766.1 MGP_LPJ_G0010857.1 mouse_genomes_project 11 118997301 118997603 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101777.1 MGP_LPJ_G0039815.1 mouse_genomes_project 11 77523480 77523942 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0031210.1 MGP_LPJ_G0018763.1 mouse_genomes_project 11 85662718 85668423 + MGP_LPJ_P0031210 Wfdc21 protein_coding protein_coding MGP_LPJ_T0030794.1 MGP_LPJ_G0018653.1 mouse_genomes_project 11 78984333 78989252 + MGP_LPJ_P0030794 Abhd15 protein_coding protein_coding MGP_LPJ_T0030795.1 MGP_LPJ_G0018653.1 mouse_genomes_project 11 78985196 79007809 + MGP_LPJ_P0030795 Abhd15 protein_coding protein_coding MGP_LPJ_T0030797.1 MGP_LPJ_G0018653.1 mouse_genomes_project 11 78987824 79007807 + MGP_LPJ_P0030797 Abhd15 protein_coding protein_coding MGP_LPJ_T0030991.1 MGP_LPJ_G0018697.1 mouse_genomes_project 11 80824896 80841303 - MGP_LPJ_P0030991 Wsb1 protein_coding protein_coding MGP_LPJ_T0030992.1 MGP_LPJ_G0018697.1 mouse_genomes_project 11 80824912 80828549 - Wsb1 protein_coding retained_intron MGP_LPJ_T0030993.1 MGP_LPJ_G0018697.1 mouse_genomes_project 11 80825800 80834184 - MGP_LPJ_P0030993 Wsb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0030994.1 MGP_LPJ_G0018697.1 mouse_genomes_project 11 80825831 80828474 - Wsb1 protein_coding processed_transcript MGP_LPJ_T0030995.1 MGP_LPJ_G0018697.1 mouse_genomes_project 11 80828812 80841301 - MGP_LPJ_P0030995 Wsb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0030996.1 MGP_LPJ_G0018697.1 mouse_genomes_project 11 80828924 80841102 - MGP_LPJ_P0030996 Wsb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0030997.1 MGP_LPJ_G0018697.1 mouse_genomes_project 11 80829632 80837656 - Wsb1 protein_coding retained_intron MGP_LPJ_T0028555.1 MGP_LPJ_G0018089.1 mouse_genomes_project 11 43484161 43498068 + MGP_LPJ_P0028555 Il12b protein_coding protein_coding MGP_LPJ_T0028556.1 MGP_LPJ_G0018089.1 mouse_genomes_project 11 43484161 43498092 + MGP_LPJ_P0028556 Il12b protein_coding protein_coding MGP_LPJ_T0098473.1 MGP_LPJ_G0036753.1 mouse_genomes_project 11 33954755 33955472 + Gm12122 sense_intronic sense_intronic MGP_LPJ_T0030050.1 MGP_LPJ_G0018477.1 mouse_genomes_project 11 71039456 71041602 + MGP_LPJ_P0030050 Cldn7 protein_coding protein_coding MGP_LPJ_T0030051.1 MGP_LPJ_G0018477.1 mouse_genomes_project 11 71040139 71042522 + MGP_LPJ_P0030051 Cldn7 protein_coding protein_coding MGP_LPJ_T0030052.1 MGP_LPJ_G0018477.1 mouse_genomes_project 11 71041550 71042285 + MGP_LPJ_P0030052 Cldn7 protein_coding protein_coding MGP_LPJ_T0003226.1 MGP_LPJ_G0002991.1 mouse_genomes_project 11 64686309 64690483 + Gm12289 antisense antisense MGP_LPJ_T0012481.1 MGP_LPJ_G0010572.1 mouse_genomes_project 11 12063381 12063930 + processed_pseudogene processed_pseudogene MGP_LPJ_T0034053.1 MGP_LPJ_G0019424.1 mouse_genomes_project 11 125435410 125442235 - MGP_LPJ_P0034053 Notum protein_coding protein_coding MGP_LPJ_T0034054.1 MGP_LPJ_G0019424.1 mouse_genomes_project 11 125435410 125442458 - MGP_LPJ_P0034054 Notum protein_coding protein_coding MGP_LPJ_T0034055.1 MGP_LPJ_G0019424.1 mouse_genomes_project 11 125435467 125439673 - Notum protein_coding retained_intron MGP_LPJ_T0034056.1 MGP_LPJ_G0019424.1 mouse_genomes_project 11 125439191 125442804 - MGP_LPJ_P0034056 Notum protein_coding protein_coding MGP_LPJ_T0100182.1 MGP_LPJ_G0038445.1 mouse_genomes_project 11 110239886 110239956 + Snord104 snoRNA snoRNA MGP_LPJ_T0006303.1 MGP_LPJ_G0005265.1 mouse_genomes_project 11 79975968 79976763 + Gm11195 lincRNA lincRNA MGP_LPJ_T0028486.1 MGP_LPJ_G0018071.1 mouse_genomes_project 11 39605532 39638700 - MGP_LPJ_P0028486 Hmmr protein_coding protein_coding MGP_LPJ_T0028487.1 MGP_LPJ_G0018071.1 mouse_genomes_project 11 39625005 39638694 - Hmmr protein_coding processed_transcript MGP_LPJ_T0028488.1 MGP_LPJ_G0018071.1 mouse_genomes_project 11 39626968 39638694 - Hmmr protein_coding processed_transcript MGP_LPJ_T0028489.1 MGP_LPJ_G0018071.1 mouse_genomes_project 11 39628839 39638669 - Hmmr protein_coding processed_transcript MGP_LPJ_T0032775.1 MGP_LPJ_G0019158.1 mouse_genomes_project 11 106695249 106703135 + MGP_LPJ_P0032775 Hexim2 protein_coding protein_coding MGP_LPJ_T0032776.1 MGP_LPJ_G0019158.1 mouse_genomes_project 11 106697036 106703828 + MGP_LPJ_P0032776 Hexim2 protein_coding protein_coding MGP_LPJ_T0032777.1 MGP_LPJ_G0019158.1 mouse_genomes_project 11 106697061 106703283 + MGP_LPJ_P0032777 Hexim2 protein_coding protein_coding MGP_LPJ_T0032778.1 MGP_LPJ_G0019158.1 mouse_genomes_project 11 106697067 106704513 + MGP_LPJ_P0032778 Hexim2 protein_coding protein_coding MGP_LPJ_T0032779.1 MGP_LPJ_G0019158.1 mouse_genomes_project 11 106697587 106702916 + MGP_LPJ_P0032779 Hexim2 protein_coding protein_coding MGP_LPJ_T0003222.1 MGP_LPJ_G0002988.1 mouse_genomes_project 11 63572843 63573498 - Cdrt4os2 antisense antisense MGP_LPJ_T0029654.1 MGP_LPJ_G0018387.1 mouse_genomes_project 11 66573249 66937368 - MGP_LPJ_P0029654 Dnah9 protein_coding protein_coding MGP_LPJ_T0029655.1 MGP_LPJ_G0018387.1 mouse_genomes_project 11 66573291 66937302 - MGP_LPJ_P0029655 Dnah9 protein_coding unknown_likely_coding MGP_LPJ_T0029656.1 MGP_LPJ_G0018387.1 mouse_genomes_project 11 66573370 66765607 - MGP_LPJ_P0029656 Dnah9 protein_coding protein_coding MGP_LPJ_T0029657.1 MGP_LPJ_G0018387.1 mouse_genomes_project 11 66594579 66599051 - Dnah9 protein_coding retained_intron MGP_LPJ_T0029658.1 MGP_LPJ_G0018387.1 mouse_genomes_project 11 66645950 66670897 - MGP_LPJ_P0029658 Dnah9 protein_coding protein_coding MGP_LPJ_T0029659.1 MGP_LPJ_G0018387.1 mouse_genomes_project 11 66881767 66937279 - MGP_LPJ_P0029659 Dnah9 protein_coding protein_coding MGP_LPJ_T0029660.1 MGP_LPJ_G0018387.1 mouse_genomes_project 11 66927595 66937386 - Dnah9 protein_coding retained_intron MGP_LPJ_T0028922.1 MGP_LPJ_G0018196.1 mouse_genomes_project 11 52550358 52992818 + MGP_LPJ_P0028922 Fstl4 protein_coding protein_coding MGP_LPJ_T0017125.1 MGP_LPJ_G0015082.1 mouse_genomes_project 11 50152427 50155576 - Gm12198 processed_transcript processed_transcript MGP_LPJ_T0033817.1 MGP_LPJ_G0019378.1 mouse_genomes_project 11 123910190 123913320 + Ccdc40 protein_coding processed_transcript MGP_LPJ_T0033818.1 MGP_LPJ_G0019378.1 mouse_genomes_project 11 123910196 123913236 + Ccdc40 protein_coding processed_transcript MGP_LPJ_T0033819.1 MGP_LPJ_G0019378.1 mouse_genomes_project 11 123910720 123946642 + MGP_LPJ_P0033819 Ccdc40 protein_coding protein_coding MGP_LPJ_T0033820.1 MGP_LPJ_G0019378.1 mouse_genomes_project 11 123910725 123948185 + MGP_LPJ_P0033820 Ccdc40 protein_coding protein_coding MGP_LPJ_T0033821.1 MGP_LPJ_G0019378.1 mouse_genomes_project 11 123922477 123935457 + Ccdc40 protein_coding retained_intron MGP_LPJ_T0033822.1 MGP_LPJ_G0019378.1 mouse_genomes_project 11 123937189 123948107 + Ccdc40 protein_coding retained_intron MGP_LPJ_T0033823.1 MGP_LPJ_G0019378.1 mouse_genomes_project 11 123942670 123948906 + Ccdc40 protein_coding processed_transcript MGP_LPJ_T0033824.1 MGP_LPJ_G0019378.1 mouse_genomes_project 11 123943510 123946862 + Ccdc40 protein_coding retained_intron MGP_LPJ_T0033825.1 MGP_LPJ_G0019378.1 mouse_genomes_project 11 123946613 123947977 + Ccdc40 protein_coding retained_intron MGP_LPJ_T0033294.1 MGP_LPJ_G0019277.1 mouse_genomes_project 11 119568655 119635586 + MGP_LPJ_P0033294 Tmem104 protein_coding protein_coding MGP_LPJ_T0033295.1 MGP_LPJ_G0019277.1 mouse_genomes_project 11 119568655 119635586 + MGP_LPJ_P0033295 Tmem104 protein_coding protein_coding MGP_LPJ_T0033296.1 MGP_LPJ_G0019277.1 mouse_genomes_project 11 119568679 119577436 + Tmem104 protein_coding processed_transcript MGP_LPJ_T0033297.1 MGP_LPJ_G0019277.1 mouse_genomes_project 11 119568719 119634328 + Tmem104 protein_coding processed_transcript MGP_LPJ_T0012676.1 MGP_LPJ_G0010767.1 mouse_genomes_project 11 79666577 79666820 - processed_pseudogene processed_pseudogene MGP_LPJ_T0033614.1 MGP_LPJ_G0019334.1 mouse_genomes_project 11 121106911 121119419 + Aanat protein_coding processed_transcript MGP_LPJ_T0033615.1 MGP_LPJ_G0019334.1 mouse_genomes_project 11 121115756 121119631 + MGP_LPJ_P0033615 Aanat protein_coding nonsense_mediated_decay MGP_LPJ_T0033616.1 MGP_LPJ_G0019334.1 mouse_genomes_project 11 121115756 121119766 + MGP_LPJ_P0033616 Aanat protein_coding protein_coding MGP_LPJ_T0033617.1 MGP_LPJ_G0019334.1 mouse_genomes_project 11 121117642 121119631 + MGP_LPJ_P0033617 Aanat protein_coding nonsense_mediated_decay MGP_LPJ_T0033618.1 MGP_LPJ_G0019334.1 mouse_genomes_project 11 121117837 121118351 + Aanat protein_coding processed_transcript MGP_LPJ_T0027986.1 MGP_LPJ_G0017954.1 mouse_genomes_project 11 8841590 8871282 + protein_coding processed_transcript MGP_LPJ_T0027987.1 MGP_LPJ_G0017954.1 mouse_genomes_project 11 8843730 8901603 + MGP_LPJ_P0027987 protein_coding protein_coding MGP_LPJ_T0027988.1 MGP_LPJ_G0017954.1 mouse_genomes_project 11 8872010 8901601 + MGP_LPJ_P0027988 protein_coding protein_coding MGP_LPJ_T0031716.1 MGP_LPJ_G0018883.1 mouse_genomes_project 11 98019423 98027142 + MGP_LPJ_P0031716 Tac4 protein_coding protein_coding MGP_LPJ_T0009682.1 MGP_LPJ_G0007800.1 mouse_genomes_project 11 42376408 42376473 - Mir146 miRNA miRNA MGP_LPJ_T0028351.1 MGP_LPJ_G0018035.1 mouse_genomes_project 11 30409380 30471085 + MGP_LPJ_P0028351 Nsg2 protein_coding protein_coding MGP_LPJ_T0028352.1 MGP_LPJ_G0018035.1 mouse_genomes_project 11 30409380 30428081 + MGP_LPJ_P0028352 Nsg2 protein_coding protein_coding MGP_LPJ_T0028353.1 MGP_LPJ_G0018035.1 mouse_genomes_project 11 30409419 30446423 + MGP_LPJ_P0028353 Nsg2 protein_coding protein_coding MGP_LPJ_T0011333.1 MGP_LPJ_G0009451.1 mouse_genomes_project 11 121348399 121348572 - Gm27401 misc_RNA misc_RNA MGP_LPJ_T0033682.1 MGP_LPJ_G0019347.1 mouse_genomes_project 11 121655728 121693949 + Sec14l1 protein_coding retained_intron MGP_LPJ_T0033683.1 MGP_LPJ_G0019347.1 mouse_genomes_project 11 121655732 121700961 + MGP_LPJ_P0033683 Sec14l1 protein_coding protein_coding MGP_LPJ_T0033684.1 MGP_LPJ_G0019347.1 mouse_genomes_project 11 121655798 121699255 + MGP_LPJ_P0033684 Sec14l1 protein_coding protein_coding MGP_LPJ_T0033685.1 MGP_LPJ_G0019347.1 mouse_genomes_project 11 121655798 121700964 + MGP_LPJ_P0033685 Sec14l1 protein_coding protein_coding MGP_LPJ_T0033686.1 MGP_LPJ_G0019347.1 mouse_genomes_project 11 121655812 121670792 + Sec14l1 protein_coding processed_transcript MGP_LPJ_T0033687.1 MGP_LPJ_G0019347.1 mouse_genomes_project 11 121696767 121698176 + Sec14l1 protein_coding retained_intron MGP_LPJ_T0030026.1 MGP_LPJ_G0018474.1 mouse_genomes_project 11 70986414 70990801 - MGP_LPJ_P0030026 Eif5a protein_coding protein_coding MGP_LPJ_T0030027.1 MGP_LPJ_G0018474.1 mouse_genomes_project 11 70986420 70991102 - MGP_LPJ_P0030027 Eif5a protein_coding protein_coding MGP_LPJ_T0030028.1 MGP_LPJ_G0018474.1 mouse_genomes_project 11 70986420 70991102 - MGP_LPJ_P0030028 Eif5a protein_coding protein_coding MGP_LPJ_T0030029.1 MGP_LPJ_G0018474.1 mouse_genomes_project 11 70986420 70990342 - MGP_LPJ_P0030029 Eif5a protein_coding protein_coding MGP_LPJ_T0030030.1 MGP_LPJ_G0018474.1 mouse_genomes_project 11 70986420 70990652 - MGP_LPJ_P0030030 Eif5a protein_coding protein_coding MGP_LPJ_T0030031.1 MGP_LPJ_G0018474.1 mouse_genomes_project 11 70986420 70991102 - MGP_LPJ_P0030031 Eif5a protein_coding protein_coding MGP_LPJ_T0030032.1 MGP_LPJ_G0018474.1 mouse_genomes_project 11 70986420 70990652 - MGP_LPJ_P0030032 Eif5a protein_coding protein_coding MGP_LPJ_T0030033.1 MGP_LPJ_G0018474.1 mouse_genomes_project 11 70986420 70991671 - MGP_LPJ_P0030033 Eif5a protein_coding protein_coding MGP_LPJ_T0030034.1 MGP_LPJ_G0018474.1 mouse_genomes_project 11 70986731 70990780 - MGP_LPJ_P0030034 Eif5a protein_coding protein_coding MGP_LPJ_T0030035.1 MGP_LPJ_G0018474.1 mouse_genomes_project 11 70986787 70990780 - MGP_LPJ_P0030035 Eif5a protein_coding protein_coding MGP_LPJ_T0030036.1 MGP_LPJ_G0018474.1 mouse_genomes_project 11 70986797 70990906 - MGP_LPJ_P0030036 Eif5a protein_coding protein_coding MGP_LPJ_T0030037.1 MGP_LPJ_G0018474.1 mouse_genomes_project 11 70986882 70988006 - MGP_LPJ_P0030037 Eif5a protein_coding protein_coding MGP_LPJ_T0030038.1 MGP_LPJ_G0018474.1 mouse_genomes_project 11 70987158 70990631 - MGP_LPJ_P0030038 Eif5a protein_coding protein_coding MGP_LPJ_T0006242.1 MGP_LPJ_G0005213.1 mouse_genomes_project 11 39359340 39360300 - 3110004A20Rik lincRNA lincRNA MGP_LPJ_T0003182.1 MGP_LPJ_G0002954.1 mouse_genomes_project 11 52913135 52922553 - Gm11186 antisense antisense MGP_LPJ_T0032551.1 MGP_LPJ_G0019119.1 mouse_genomes_project 11 105503063 105517170 + MGP_LPJ_P0032551 Cd300lg protein_coding protein_coding MGP_LPJ_T0032552.1 MGP_LPJ_G0019119.1 mouse_genomes_project 11 105503063 105517170 + MGP_LPJ_P0032552 Cd300lg protein_coding protein_coding MGP_LPJ_T0032553.1 MGP_LPJ_G0019119.1 mouse_genomes_project 11 105503063 105511947 + MGP_LPJ_P0032553 Cd300lg protein_coding protein_coding MGP_LPJ_T0032554.1 MGP_LPJ_G0019119.1 mouse_genomes_project 11 105503063 105517170 + MGP_LPJ_P0032554 Cd300lg protein_coding protein_coding MGP_LPJ_T0029805.1 MGP_LPJ_G0018423.1 mouse_genomes_project 11 70063339 70065563 + MGP_LPJ_P0029805 Tmem107 protein_coding protein_coding MGP_LPJ_T0029806.1 MGP_LPJ_G0018423.1 mouse_genomes_project 11 70063344 70065826 + MGP_LPJ_P0029806 Tmem107 protein_coding protein_coding MGP_LPJ_T0029807.1 MGP_LPJ_G0018423.1 mouse_genomes_project 11 70063346 70065356 + Tmem107 protein_coding processed_transcript MGP_LPJ_T0029808.1 MGP_LPJ_G0018423.1 mouse_genomes_project 11 70063387 70064037 + Tmem107 protein_coding processed_transcript MGP_LPJ_T0029809.1 MGP_LPJ_G0018423.1 mouse_genomes_project 11 70063406 70065794 + Tmem107 protein_coding processed_transcript MGP_LPJ_T0029810.1 MGP_LPJ_G0018423.1 mouse_genomes_project 11 70063451 70065557 + Tmem107 protein_coding processed_transcript MGP_LPJ_T0029811.1 MGP_LPJ_G0018423.1 mouse_genomes_project 11 70063469 70065349 + Tmem107 protein_coding processed_transcript MGP_LPJ_T0029812.1 MGP_LPJ_G0018423.1 mouse_genomes_project 11 70063835 70065093 + Tmem107 protein_coding processed_transcript MGP_LPJ_T0098111.1 MGP_LPJ_G0036392.1 mouse_genomes_project 11 3447600 3447714 + n-R5s67 rRNA rRNA MGP_LPJ_T0012464.1 MGP_LPJ_G0010555.1 mouse_genomes_project 11 3648760 3649149 - processed_pseudogene processed_pseudogene MGP_LPJ_T0029965.1 MGP_LPJ_G0018459.1 mouse_genomes_project 11 70824565 70839668 - MGP_LPJ_P0029965 Chrnb1 protein_coding protein_coding MGP_LPJ_T0029966.1 MGP_LPJ_G0018459.1 mouse_genomes_project 11 70836428 70837995 - Chrnb1 protein_coding retained_intron MGP_LPJ_T0029967.1 MGP_LPJ_G0018459.1 mouse_genomes_project 11 70836503 70837539 - Chrnb1 protein_coding retained_intron MGP_LPJ_T0029968.1 MGP_LPJ_G0018459.1 mouse_genomes_project 11 70837238 70839630 - Chrnb1 protein_coding processed_transcript MGP_LPJ_T0032270.1 MGP_LPJ_G0019060.1 mouse_genomes_project 11 103861219 103895270 + Ttc25 protein_coding retained_intron MGP_LPJ_T0032271.1 MGP_LPJ_G0019060.1 mouse_genomes_project 11 103861235 103865732 + Ttc25 protein_coding retained_intron MGP_LPJ_T0032272.1 MGP_LPJ_G0019060.1 mouse_genomes_project 11 103861326 103897429 + MGP_LPJ_P0032272 Ttc25 protein_coding protein_coding MGP_LPJ_T0032273.1 MGP_LPJ_G0019060.1 mouse_genomes_project 11 103865068 103865850 + Ttc25 protein_coding retained_intron MGP_LPJ_T0028825.1 MGP_LPJ_G0018172.1 mouse_genomes_project 11 50648052 50648994 + MGP_LPJ_P0028825 protein_coding protein_coding MGP_LPJ_T0098128.1 MGP_LPJ_G0036409.1 mouse_genomes_project 11 120810426 120810542 - n-R5s74 rRNA rRNA MGP_LPJ_T0031568.1 MGP_LPJ_G0018849.1 mouse_genomes_project 11 96462334 96502067 + MGP_LPJ_P0031568 Mbtd1 protein_coding protein_coding MGP_LPJ_T0031569.1 MGP_LPJ_G0018849.1 mouse_genomes_project 11 96462574 96502077 + Mbtd1 protein_coding processed_transcript MGP_LPJ_T0031570.1 MGP_LPJ_G0018849.1 mouse_genomes_project 11 96462675 96485466 + Mbtd1 protein_coding processed_transcript MGP_LPJ_T0031571.1 MGP_LPJ_G0018849.1 mouse_genomes_project 11 96462676 96486927 + Mbtd1 protein_coding processed_transcript MGP_LPJ_T0031572.1 MGP_LPJ_G0018849.1 mouse_genomes_project 11 96462685 96532282 + MGP_LPJ_P0031572 Mbtd1 protein_coding protein_coding MGP_LPJ_T0031573.1 MGP_LPJ_G0018849.1 mouse_genomes_project 11 96463348 96510853 + MGP_LPJ_P0031573 Mbtd1 protein_coding protein_coding MGP_LPJ_T0031574.1 MGP_LPJ_G0018849.1 mouse_genomes_project 11 96481684 96530858 + MGP_LPJ_P0031574 Mbtd1 protein_coding protein_coding MGP_LPJ_T0031575.1 MGP_LPJ_G0018849.1 mouse_genomes_project 11 96486511 96493009 + Mbtd1 protein_coding processed_transcript MGP_LPJ_T0031576.1 MGP_LPJ_G0018849.1 mouse_genomes_project 11 96493003 96513304 + Mbtd1 protein_coding processed_transcript MGP_LPJ_T0031577.1 MGP_LPJ_G0018849.1 mouse_genomes_project 11 96498347 96513013 + Mbtd1 protein_coding processed_transcript MGP_LPJ_T0031578.1 MGP_LPJ_G0018849.1 mouse_genomes_project 11 96503658 96506910 + Mbtd1 protein_coding processed_transcript MGP_LPJ_T0031579.1 MGP_LPJ_G0018849.1 mouse_genomes_project 11 96506130 96522838 + Mbtd1 protein_coding processed_transcript MGP_LPJ_T0000375.1 MGP_LPJ_G0000313.1 mouse_genomes_project 11 43467518 43467571 - mt-Tk Mt_tRNA Mt_tRNA MGP_LPJ_T0030395.1 MGP_LPJ_G0018546.1 mouse_genomes_project 11 73587838 73626101 - MGP_LPJ_P0030395 Spns2 protein_coding protein_coding MGP_LPJ_T0030396.1 MGP_LPJ_G0018546.1 mouse_genomes_project 11 73587842 73590742 - Spns2 protein_coding retained_intron MGP_LPJ_T0030397.1 MGP_LPJ_G0018546.1 mouse_genomes_project 11 73588808 73592551 - Spns2 protein_coding processed_transcript MGP_LPJ_T0030398.1 MGP_LPJ_G0018546.1 mouse_genomes_project 11 73588932 73592822 - MGP_LPJ_P0030398 Spns2 protein_coding protein_coding MGP_LPJ_T0030399.1 MGP_LPJ_G0018546.1 mouse_genomes_project 11 73589041 73590319 - Spns2 protein_coding processed_transcript MGP_LPJ_T0030400.1 MGP_LPJ_G0018546.1 mouse_genomes_project 11 73595229 73611222 - Spns2 protein_coding processed_transcript MGP_LPJ_T0028705.1 MGP_LPJ_G0018134.1 mouse_genomes_project 11 48792140 48793076 + MGP_LPJ_P0028705 Olfr1390 protein_coding protein_coding MGP_LPJ_T0009683.1 MGP_LPJ_G0007801.1 mouse_genomes_project 11 43555651 43555701 + Gm22121 miRNA miRNA MGP_LPJ_T0017081.1 MGP_LPJ_G0015060.1 mouse_genomes_project 11 264838 279139 + Gm11944 processed_transcript processed_transcript MGP_LPJ_T0029182.1 MGP_LPJ_G0018271.1 mouse_genomes_project 11 58826094 58828567 - MGP_LPJ_P0029182 protein_coding protein_coding MGP_LPJ_T0029183.1 MGP_LPJ_G0018271.1 mouse_genomes_project 11 58826094 58827154 - MGP_LPJ_P0029183 protein_coding protein_coding MGP_LPJ_T0029184.1 MGP_LPJ_G0018271.1 mouse_genomes_project 11 58826646 58827846 - MGP_LPJ_P0029184 protein_coding protein_coding MGP_LPJ_T0028991.1 MGP_LPJ_G0018216.1 mouse_genomes_project 11 53652178 53664460 - Gm12216 protein_coding processed_transcript MGP_LPJ_T0028992.1 MGP_LPJ_G0018216.1 mouse_genomes_project 11 53653051 53730378 - Gm12216 protein_coding processed_transcript MGP_LPJ_T0028993.1 MGP_LPJ_G0018216.1 mouse_genomes_project 11 53654287 53730490 - MGP_LPJ_P0028993 Gm12216 protein_coding protein_coding MGP_LPJ_T0028994.1 MGP_LPJ_G0018216.1 mouse_genomes_project 11 53672121 53730463 - Gm12216 protein_coding processed_transcript MGP_LPJ_T0028995.1 MGP_LPJ_G0018216.1 mouse_genomes_project 11 53680302 53730490 - MGP_LPJ_P0028995 Gm12216 protein_coding protein_coding MGP_LPJ_T0028996.1 MGP_LPJ_G0018216.1 mouse_genomes_project 11 53684004 53730490 - MGP_LPJ_P0028996 Gm12216 protein_coding protein_coding MGP_LPJ_T0032250.1 MGP_LPJ_G0019056.1 mouse_genomes_project 11 103728512 103747193 - MGP_LPJ_P0032250 Nt5c3b protein_coding protein_coding MGP_LPJ_T0032251.1 MGP_LPJ_G0019056.1 mouse_genomes_project 11 103728512 103751188 - MGP_LPJ_P0032251 Nt5c3b protein_coding protein_coding MGP_LPJ_T0032253.1 MGP_LPJ_G0019056.1 mouse_genomes_project 11 103735586 103747159 - MGP_LPJ_P0032253 Nt5c3b protein_coding protein_coding MGP_LPJ_T0032254.1 MGP_LPJ_G0019056.1 mouse_genomes_project 11 103736089 103737716 - Nt5c3b protein_coding processed_transcript MGP_LPJ_T0032255.1 MGP_LPJ_G0019056.1 mouse_genomes_project 11 103739059 103747020 - Nt5c3b protein_coding processed_transcript MGP_LPJ_T0032256.1 MGP_LPJ_G0019056.1 mouse_genomes_project 11 103739096 103747177 - Nt5c3b protein_coding processed_transcript MGP_LPJ_T0032257.1 MGP_LPJ_G0019056.1 mouse_genomes_project 11 103739846 103747120 - Nt5c3b protein_coding processed_transcript MGP_LPJ_T0032258.1 MGP_LPJ_G0019056.1 mouse_genomes_project 11 103744395 103747033 - Nt5c3b protein_coding processed_transcript MGP_LPJ_T0032259.1 MGP_LPJ_G0019056.1 mouse_genomes_project 11 103745656 103747031 - Nt5c3b protein_coding processed_transcript MGP_LPJ_T0033161.1 MGP_LPJ_G0019245.1 mouse_genomes_project 11 114192246 114270079 - MGP_LPJ_P0033161 Abca6 protein_coding protein_coding MGP_LPJ_T0033162.1 MGP_LPJ_G0019245.1 mouse_genomes_project 11 114254361 114270079 - Abca6 protein_coding processed_transcript MGP_LPJ_T0031550.1 MGP_LPJ_G0018845.1 mouse_genomes_project 11 93011570 93056209 - MGP_LPJ_P0031550 Tom1l1 protein_coding protein_coding MGP_LPJ_T0031551.1 MGP_LPJ_G0018845.1 mouse_genomes_project 11 93011576 93056240 - MGP_LPJ_P0031551 Tom1l1 protein_coding protein_coding MGP_LPJ_T0031552.1 MGP_LPJ_G0018845.1 mouse_genomes_project 11 93011576 93056218 - MGP_LPJ_P0031552 Tom1l1 protein_coding protein_coding MGP_LPJ_T0031553.1 MGP_LPJ_G0018845.1 mouse_genomes_project 11 93012114 93015787 - Tom1l1 protein_coding retained_intron MGP_LPJ_T0031554.1 MGP_LPJ_G0018845.1 mouse_genomes_project 11 93022930 93029175 - Tom1l1 protein_coding retained_intron MGP_LPJ_T0031555.1 MGP_LPJ_G0018845.1 mouse_genomes_project 11 93036711 93056227 - MGP_LPJ_P0031555 Tom1l1 protein_coding protein_coding MGP_LPJ_T0031556.1 MGP_LPJ_G0018845.1 mouse_genomes_project 11 93051919 93057004 - Tom1l1 protein_coding processed_transcript MGP_LPJ_T0006287.1 MGP_LPJ_G0005252.1 mouse_genomes_project 11 72194701 72196274 - 6330403K07Rik lincRNA lincRNA MGP_LPJ_T0012614.1 MGP_LPJ_G0010705.1 mouse_genomes_project 11 58399884 58401158 + processed_pseudogene processed_pseudogene MGP_LPJ_T0027746.1 MGP_LPJ_G0017899.1 mouse_genomes_project 11 1847980 1933155 - MGP_LPJ_P0027746 Nf2 protein_coding protein_coding MGP_LPJ_T0027747.1 MGP_LPJ_G0017899.1 mouse_genomes_project 11 1847980 1932599 - MGP_LPJ_P0027747 Nf2 protein_coding protein_coding MGP_LPJ_T0027748.1 MGP_LPJ_G0017899.1 mouse_genomes_project 11 1850060 1866623 - Nf2 protein_coding retained_intron MGP_LPJ_T0027749.1 MGP_LPJ_G0017899.1 mouse_genomes_project 11 1863451 1916889 - Nf2 protein_coding processed_transcript MGP_LPJ_T0027750.1 MGP_LPJ_G0017899.1 mouse_genomes_project 11 1865951 1898160 - MGP_LPJ_P0027750 Nf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0027751.1 MGP_LPJ_G0017899.1 mouse_genomes_project 11 1872696 1932808 - MGP_LPJ_P0027751 Nf2 protein_coding protein_coding MGP_LPJ_T0027752.1 MGP_LPJ_G0017899.1 mouse_genomes_project 11 1875906 1897235 - Nf2 protein_coding processed_transcript MGP_LPJ_T0027753.1 MGP_LPJ_G0017899.1 mouse_genomes_project 11 1875955 1900542 - MGP_LPJ_P0027753 Nf2 protein_coding protein_coding MGP_LPJ_T0027754.1 MGP_LPJ_G0017899.1 mouse_genomes_project 11 1881887 1902388 - MGP_LPJ_P0027754 Nf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0027755.1 MGP_LPJ_G0017899.1 mouse_genomes_project 11 1900499 1908073 - Nf2 protein_coding processed_transcript MGP_LPJ_T0027756.1 MGP_LPJ_G0017899.1 mouse_genomes_project 11 1912982 1932739 - MGP_LPJ_P0027756 Nf2 protein_coding protein_coding MGP_LPJ_T0030967.1 MGP_LPJ_G0018690.1 mouse_genomes_project 11 80070009 80075375 + MGP_LPJ_P0030967 Ift20 protein_coding protein_coding MGP_LPJ_T0030968.1 MGP_LPJ_G0018690.1 mouse_genomes_project 11 80070076 80075025 + MGP_LPJ_P0030968 Ift20 protein_coding protein_coding MGP_LPJ_T0030969.1 MGP_LPJ_G0018690.1 mouse_genomes_project 11 80070091 80075131 + MGP_LPJ_P0030969 Ift20 protein_coding protein_coding MGP_LPJ_T0030970.1 MGP_LPJ_G0018690.1 mouse_genomes_project 11 80070093 80075131 + Ift20 protein_coding retained_intron MGP_LPJ_T0030971.1 MGP_LPJ_G0018690.1 mouse_genomes_project 11 80070121 80075131 + Ift20 protein_coding retained_intron MGP_LPJ_T0006210.1 MGP_LPJ_G0005187.1 mouse_genomes_project 11 20993168 21009588 + 1700061J23Rik lincRNA lincRNA MGP_LPJ_T0006196.1 MGP_LPJ_G0005174.1 mouse_genomes_project 11 15678670 15686372 + Gm12018 lincRNA lincRNA MGP_LPJ_T0030830.1 MGP_LPJ_G0018660.1 mouse_genomes_project 11 79382437 79396977 - MGP_LPJ_P0030830 Pipox protein_coding protein_coding MGP_LPJ_T0030831.1 MGP_LPJ_G0018660.1 mouse_genomes_project 11 79382882 79384509 - Pipox protein_coding retained_intron MGP_LPJ_T0030832.1 MGP_LPJ_G0018660.1 mouse_genomes_project 11 79384441 79386367 - Pipox protein_coding processed_transcript MGP_LPJ_T0017224.1 MGP_LPJ_G0015132.1 mouse_genomes_project 11 118483692 118484634 + 1700092K14Rik processed_transcript processed_transcript MGP_LPJ_T0003343.1 MGP_LPJ_G0003084.1 mouse_genomes_project 11 111228924 111230913 + Gm11712 antisense antisense MGP_LPJ_T0032451.1 MGP_LPJ_G0019099.1 mouse_genomes_project 11 104811820 104829431 - MGP_LPJ_P0032451 Gm27029 protein_coding protein_coding MGP_LPJ_T0032453.1 MGP_LPJ_G0019099.1 mouse_genomes_project 11 104811995 104829708 - MGP_LPJ_P0032453 Gm27029 protein_coding protein_coding MGP_LPJ_T0028668.1 MGP_LPJ_G0018126.1 mouse_genomes_project 11 48491182 48494030 - MGP_LPJ_P0028668 protein_coding protein_coding MGP_LPJ_T0028096.1 MGP_LPJ_G0017979.1 mouse_genomes_project 11 18543344 18550823 - MGP_LPJ_P0028096 Lgalsl protein_coding protein_coding MGP_LPJ_T0028097.1 MGP_LPJ_G0017979.1 mouse_genomes_project 11 18546118 18550522 - Lgalsl protein_coding processed_transcript MGP_LPJ_T0028098.1 MGP_LPJ_G0017979.1 mouse_genomes_project 11 18549078 18550823 - Lgalsl protein_coding processed_transcript MGP_LPJ_T0028099.1 MGP_LPJ_G0017979.1 mouse_genomes_project 11 18549563 18550789 - Lgalsl protein_coding processed_transcript MGP_LPJ_T0027921.1 MGP_LPJ_G0017936.1 mouse_genomes_project 11 3755996 3807772 + MGP_LPJ_P0027921 Ccm2 protein_coding protein_coding MGP_LPJ_T0027922.1 MGP_LPJ_G0017936.1 mouse_genomes_project 11 3756019 3800502 + MGP_LPJ_P0027922 Ccm2 protein_coding protein_coding MGP_LPJ_T0027923.1 MGP_LPJ_G0017936.1 mouse_genomes_project 11 3769979 3807762 + MGP_LPJ_P0027923 Ccm2 protein_coding protein_coding MGP_LPJ_T0027924.1 MGP_LPJ_G0017936.1 mouse_genomes_project 11 3770921 3804161 + MGP_LPJ_P0027924 Ccm2 protein_coding nonsense_mediated_decay MGP_LPJ_T0027925.1 MGP_LPJ_G0017936.1 mouse_genomes_project 11 3770930 3772763 + Ccm2 protein_coding processed_transcript MGP_LPJ_T0027926.1 MGP_LPJ_G0017936.1 mouse_genomes_project 11 3770943 3804098 + MGP_LPJ_P0027926 Ccm2 protein_coding protein_coding MGP_LPJ_T0027927.1 MGP_LPJ_G0017936.1 mouse_genomes_project 11 3771039 3807770 + MGP_LPJ_P0027927 Ccm2 protein_coding protein_coding MGP_LPJ_T0027928.1 MGP_LPJ_G0017936.1 mouse_genomes_project 11 3804075 3805297 + Ccm2 protein_coding retained_intron MGP_LPJ_T0006351.1 MGP_LPJ_G0005295.1 mouse_genomes_project 11 99577781 99612513 - 2010300F17Rik lincRNA lincRNA MGP_LPJ_T0006352.1 MGP_LPJ_G0005295.1 mouse_genomes_project 11 99611108 99612487 - 2010300F17Rik lincRNA lincRNA MGP_LPJ_T0098395.1 MGP_LPJ_G0036676.1 mouse_genomes_project 11 17309085 17309229 - Gm23386 scaRNA scaRNA MGP_LPJ_T0028283.1 MGP_LPJ_G0018019.1 mouse_genomes_project 11 27810982 27812690 - Rps27a protein_coding processed_transcript MGP_LPJ_T0028284.1 MGP_LPJ_G0018019.1 mouse_genomes_project 11 27810982 27813879 - MGP_LPJ_P0028284 Rps27a protein_coding protein_coding MGP_LPJ_T0028285.1 MGP_LPJ_G0018019.1 mouse_genomes_project 11 27810982 27814128 - MGP_LPJ_P0028285 Rps27a protein_coding protein_coding MGP_LPJ_T0028286.1 MGP_LPJ_G0018019.1 mouse_genomes_project 11 27811035 27813901 - Rps27a protein_coding processed_transcript MGP_LPJ_T0028287.1 MGP_LPJ_G0018019.1 mouse_genomes_project 11 27813134 27813910 - Rps27a protein_coding processed_transcript MGP_LPJ_T0012513.1 MGP_LPJ_G0010604.1 mouse_genomes_project 11 19485211 19487301 - processed_pseudogene processed_pseudogene MGP_LPJ_T0031326.1 MGP_LPJ_G0018786.1 mouse_genomes_project 11 87860973 87870360 + MGP_LPJ_P0031326 Tbx2 protein_coding protein_coding MGP_LPJ_T0030378.1 MGP_LPJ_G0018541.1 mouse_genomes_project 11 73439832 73444747 + MGP_LPJ_P0030378 Fbxo39 protein_coding protein_coding MGP_LPJ_T0006278.1 MGP_LPJ_G0005246.1 mouse_genomes_project 11 66009507 66020806 - Gm12295 lincRNA lincRNA MGP_LPJ_T0006279.1 MGP_LPJ_G0005246.1 mouse_genomes_project 11 66018912 66099434 - Gm12295 lincRNA lincRNA MGP_LPJ_T0034191.1 MGP_LPJ_G0019452.1 mouse_genomes_project 11 126255173 126272774 + MGP_LPJ_P0034191 Fn3k protein_coding protein_coding MGP_LPJ_T0034192.1 MGP_LPJ_G0019452.1 mouse_genomes_project 11 126255227 126265268 + MGP_LPJ_P0034192 Fn3k protein_coding protein_coding MGP_LPJ_T0034193.1 MGP_LPJ_G0019452.1 mouse_genomes_project 11 126255228 126265792 + MGP_LPJ_P0034193 Fn3k protein_coding protein_coding MGP_LPJ_T0098956.1 MGP_LPJ_G0037219.1 mouse_genomes_project 11 120028770 120028877 + Gm25364 snRNA snRNA MGP_LPJ_T0032797.1 MGP_LPJ_G0019163.1 mouse_genomes_project 11 106910632 106939988 - MGP_LPJ_P0032797 Arhgap27 protein_coding protein_coding MGP_LPJ_T0032798.1 MGP_LPJ_G0019163.1 mouse_genomes_project 11 106910633 106942780 - Arhgap27 protein_coding retained_intron MGP_LPJ_T0032799.1 MGP_LPJ_G0019163.1 mouse_genomes_project 11 106910635 106923828 - MGP_LPJ_P0032799 Arhgap27 protein_coding protein_coding MGP_LPJ_T0032800.1 MGP_LPJ_G0019163.1 mouse_genomes_project 11 106912301 106913242 - Arhgap27 protein_coding retained_intron MGP_LPJ_T0032801.1 MGP_LPJ_G0019163.1 mouse_genomes_project 11 106912364 106912531 - Arhgap27 protein_coding processed_transcript MGP_LPJ_T0032802.1 MGP_LPJ_G0019163.1 mouse_genomes_project 11 106912600 106913221 - Arhgap27 protein_coding retained_intron MGP_LPJ_T0032803.1 MGP_LPJ_G0019163.1 mouse_genomes_project 11 106914399 106918849 - Arhgap27 protein_coding retained_intron MGP_LPJ_T0032804.1 MGP_LPJ_G0019163.1 mouse_genomes_project 11 106916911 106918433 - Arhgap27 protein_coding retained_intron MGP_LPJ_T0032805.1 MGP_LPJ_G0019163.1 mouse_genomes_project 11 106918358 106935447 - MGP_LPJ_P0032805 Arhgap27 protein_coding protein_coding MGP_LPJ_T0032806.1 MGP_LPJ_G0019163.1 mouse_genomes_project 11 106919261 106935461 - MGP_LPJ_P0032806 Arhgap27 protein_coding protein_coding MGP_LPJ_T0032807.1 MGP_LPJ_G0019163.1 mouse_genomes_project 11 106938826 106942552 - MGP_LPJ_P0032807 Arhgap27 protein_coding protein_coding MGP_LPJ_T0029652.1 MGP_LPJ_G0018386.1 mouse_genomes_project 11 66549152 66571206 + MGP_LPJ_P0029652 Zkscan6 protein_coding protein_coding MGP_LPJ_T0029653.1 MGP_LPJ_G0018386.1 mouse_genomes_project 11 66549221 66571207 + MGP_LPJ_P0029653 Zkscan6 protein_coding protein_coding MGP_LPJ_T0100170.1 MGP_LPJ_G0038433.1 mouse_genomes_project 11 85172614 85172711 + Snord7 snoRNA snoRNA MGP_LPJ_T0006262.1 MGP_LPJ_G0005231.1 mouse_genomes_project 11 57701156 57703257 + Gm12243 lincRNA lincRNA MGP_LPJ_T0028141.1 MGP_LPJ_G0017991.1 mouse_genomes_project 11 20718729 20810614 - MGP_LPJ_P0028141 protein_coding protein_coding MGP_LPJ_T0028142.1 MGP_LPJ_G0017991.1 mouse_genomes_project 11 20722352 20810484 - MGP_LPJ_P0028142 protein_coding protein_coding MGP_LPJ_T0028143.1 MGP_LPJ_G0017991.1 mouse_genomes_project 11 20722357 20807228 - MGP_LPJ_P0028143 protein_coding protein_coding MGP_LPJ_T0028144.1 MGP_LPJ_G0017991.1 mouse_genomes_project 11 20722428 20784967 - protein_coding retained_intron MGP_LPJ_T0028145.1 MGP_LPJ_G0017991.1 mouse_genomes_project 11 20722616 20801010 - protein_coding processed_transcript MGP_LPJ_T0028146.1 MGP_LPJ_G0017991.1 mouse_genomes_project 11 20784171 20810416 - MGP_LPJ_P0028146 protein_coding protein_coding MGP_LPJ_T0030103.1 MGP_LPJ_G0018485.1 mouse_genomes_project 11 71136429 71140011 + MGP_LPJ_P0030103 Asgr1 protein_coding protein_coding MGP_LPJ_T0030104.1 MGP_LPJ_G0018485.1 mouse_genomes_project 11 71136699 71140011 + MGP_LPJ_P0030104 Asgr1 protein_coding protein_coding MGP_LPJ_T0030105.1 MGP_LPJ_G0018485.1 mouse_genomes_project 11 71136699 71140008 + MGP_LPJ_P0030105 Asgr1 protein_coding protein_coding MGP_LPJ_T0030106.1 MGP_LPJ_G0018485.1 mouse_genomes_project 11 71137042 71140011 + MGP_LPJ_P0030106 Asgr1 protein_coding protein_coding MGP_LPJ_T0030107.1 MGP_LPJ_G0018485.1 mouse_genomes_project 11 71138223 71139487 + MGP_LPJ_P0030107 Asgr1 protein_coding protein_coding MGP_LPJ_T0009665.1 MGP_LPJ_G0007783.1 mouse_genomes_project 11 3591146 3591210 + Mir7651 miRNA miRNA MGP_LPJ_T0028044.1 MGP_LPJ_G0017963.1 mouse_genomes_project 11 14506517 14509591 + MGP_LPJ_P0028044 Fbxo48 protein_coding protein_coding MGP_LPJ_T0028045.1 MGP_LPJ_G0017963.1 mouse_genomes_project 11 14506552 14509916 + MGP_LPJ_P0028045 Fbxo48 protein_coding protein_coding MGP_LPJ_T0012782.1 MGP_LPJ_G0010873.1 mouse_genomes_project 11 125899561 125899729 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012696.1 MGP_LPJ_G0010787.1 mouse_genomes_project 11 87209309 87210213 + processed_pseudogene processed_pseudogene MGP_LPJ_T0032640.1 MGP_LPJ_G0019134.1 mouse_genomes_project 11 105887300 105895646 + MGP_LPJ_P0032640 Rundc3a protein_coding protein_coding MGP_LPJ_T0032641.1 MGP_LPJ_G0019134.1 mouse_genomes_project 11 105887300 105895646 + MGP_LPJ_P0032641 Rundc3a protein_coding protein_coding MGP_LPJ_T0032642.1 MGP_LPJ_G0019134.1 mouse_genomes_project 11 105887300 105895646 + MGP_LPJ_P0032642 Rundc3a protein_coding protein_coding MGP_LPJ_T0032643.1 MGP_LPJ_G0019134.1 mouse_genomes_project 11 105887300 105896447 + MGP_LPJ_P0032643 Rundc3a protein_coding protein_coding MGP_LPJ_T0032644.1 MGP_LPJ_G0019134.1 mouse_genomes_project 11 105891754 105896447 + Rundc3a protein_coding retained_intron MGP_LPJ_T0032645.1 MGP_LPJ_G0019134.1 mouse_genomes_project 11 105892009 105893671 + Rundc3a protein_coding processed_transcript MGP_LPJ_T0032646.1 MGP_LPJ_G0019134.1 mouse_genomes_project 11 105893058 105896121 + Rundc3a protein_coding processed_transcript MGP_LPJ_T0032647.1 MGP_LPJ_G0019134.1 mouse_genomes_project 11 105893455 105896118 + Rundc3a protein_coding processed_transcript MGP_LPJ_T0032648.1 MGP_LPJ_G0019134.1 mouse_genomes_project 11 105893647 105896044 + Rundc3a protein_coding processed_transcript MGP_LPJ_T0032649.1 MGP_LPJ_G0019134.1 mouse_genomes_project 11 105893749 105894677 + Rundc3a protein_coding processed_transcript MGP_LPJ_T0009787.1 MGP_LPJ_G0007905.1 mouse_genomes_project 11 124811246 124811358 - Gm25948 miRNA miRNA MGP_LPJ_T0012461.1 MGP_LPJ_G0010552.1 mouse_genomes_project 11 3413174 3413518 + processed_pseudogene processed_pseudogene MGP_LPJ_T0028577.1 MGP_LPJ_G0018094.1 mouse_genomes_project 11 45062244 45078994 - MGP_LPJ_P0028577 Lsm11 protein_coding protein_coding MGP_LPJ_T0028578.1 MGP_LPJ_G0018094.1 mouse_genomes_project 11 45065055 45078994 - MGP_LPJ_P0028578 Lsm11 protein_coding nonsense_mediated_decay MGP_LPJ_T0012504.1 MGP_LPJ_G0010595.1 mouse_genomes_project 11 18283401 18284024 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003175.1 MGP_LPJ_G0002948.1 mouse_genomes_project 11 50415885 50417136 - Gm12660 antisense antisense MGP_LPJ_T0029946.1 MGP_LPJ_G0018453.1 mouse_genomes_project 11 70710151 70723591 - MGP_LPJ_P0029946 Tnfsfm13 protein_coding protein_coding MGP_LPJ_T0029949.1 MGP_LPJ_G0018453.1 mouse_genomes_project 11 70710622 70723303 - MGP_LPJ_P0029949 Tnfsfm13 protein_coding protein_coding MGP_LPJ_T0029950.1 MGP_LPJ_G0018453.1 mouse_genomes_project 11 70710805 70723302 - MGP_LPJ_P0029950 Tnfsfm13 protein_coding protein_coding MGP_LPJ_T0003361.1 MGP_LPJ_G0003098.1 mouse_genomes_project 11 120381845 120382973 + Recql5os1 antisense antisense MGP_LPJ_T0030111.1 MGP_LPJ_G0018487.1 mouse_genomes_project 11 71216371 71221533 + Mgl2 protein_coding processed_transcript MGP_LPJ_T0030112.1 MGP_LPJ_G0018487.1 mouse_genomes_project 11 71216385 71225292 + MGP_LPJ_P0030112 Mgl2 protein_coding protein_coding MGP_LPJ_T0030113.1 MGP_LPJ_G0018487.1 mouse_genomes_project 11 71221243 71224857 + MGP_LPJ_P0030113 Mgl2 protein_coding unknown_likely_coding MGP_LPJ_T0032392.1 MGP_LPJ_G0019088.1 mouse_genomes_project 11 104567339 104607517 - MGP_LPJ_P0032392 Ezh1 protein_coding protein_coding MGP_LPJ_T0032393.1 MGP_LPJ_G0019088.1 mouse_genomes_project 11 104569507 104570655 - Ezh1 protein_coding processed_transcript MGP_LPJ_T0032394.1 MGP_LPJ_G0019088.1 mouse_genomes_project 11 104569962 104581305 - Ezh1 protein_coding processed_transcript MGP_LPJ_T0032395.1 MGP_LPJ_G0019088.1 mouse_genomes_project 11 104573619 104607517 - MGP_LPJ_P0032395 Ezh1 protein_coding protein_coding MGP_LPJ_T0032396.1 MGP_LPJ_G0019088.1 mouse_genomes_project 11 104574864 104577170 - Ezh1 protein_coding processed_transcript MGP_LPJ_T0032397.1 MGP_LPJ_G0019088.1 mouse_genomes_project 11 104575529 104589161 - Ezh1 protein_coding processed_transcript MGP_LPJ_T0032398.1 MGP_LPJ_G0019088.1 mouse_genomes_project 11 104585647 104587988 - Ezh1 protein_coding processed_transcript MGP_LPJ_T0032399.1 MGP_LPJ_G0019088.1 mouse_genomes_project 11 104597196 104607533 - Ezh1 protein_coding processed_transcript MGP_LPJ_T0031971.1 MGP_LPJ_G0018947.1 mouse_genomes_project 11 100815083 100817347 + MGP_LPJ_P0031971 B230217C12Rik protein_coding protein_coding MGP_LPJ_T0031972.1 MGP_LPJ_G0018947.1 mouse_genomes_project 11 100815596 100818403 + B230217C12Rik protein_coding lincRNA MGP_LPJ_T0031973.1 MGP_LPJ_G0018947.1 mouse_genomes_project 11 100815618 100818113 + B230217C12Rik protein_coding processed_transcript MGP_LPJ_T0031974.1 MGP_LPJ_G0018947.1 mouse_genomes_project 11 100815622 100817347 + B230217C12Rik protein_coding processed_transcript MGP_LPJ_T0101776.1 MGP_LPJ_G0039814.1 mouse_genomes_project 11 75533877 75534818 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0030494.1 MGP_LPJ_G0018579.1 mouse_genomes_project 11 75063940 75064879 - MGP_LPJ_P0030494 Olfr393 protein_coding protein_coding MGP_LPJ_T0101792.1 MGP_LPJ_G0039830.1 mouse_genomes_project 11 103215243 103215660 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0030067.1 MGP_LPJ_G0018480.1 mouse_genomes_project 11 71066849 71070428 + MGP_LPJ_P0030067 Gabarap protein_coding protein_coding MGP_LPJ_T0030068.1 MGP_LPJ_G0018480.1 mouse_genomes_project 11 71067345 71070417 + MGP_LPJ_P0030068 Gabarap protein_coding protein_coding MGP_LPJ_T0030069.1 MGP_LPJ_G0018480.1 mouse_genomes_project 11 71067390 71070412 + Gabarap protein_coding retained_intron MGP_LPJ_T0030070.1 MGP_LPJ_G0018480.1 mouse_genomes_project 11 71067513 71068308 + Gabarap protein_coding processed_transcript MGP_LPJ_T0003292.1 MGP_LPJ_G0003042.1 mouse_genomes_project 11 98828135 98830300 + Gm29202 antisense antisense MGP_LPJ_T0032363.1 MGP_LPJ_G0019080.1 mouse_genomes_project 11 104447957 104452888 + MGP_LPJ_P0032363 Mlx protein_coding protein_coding MGP_LPJ_T0032364.1 MGP_LPJ_G0019080.1 mouse_genomes_project 11 104447957 104452888 + MGP_LPJ_P0032364 Mlx protein_coding protein_coding MGP_LPJ_T0032365.1 MGP_LPJ_G0019080.1 mouse_genomes_project 11 104447970 104451807 + Mlx protein_coding processed_transcript MGP_LPJ_T0032366.1 MGP_LPJ_G0019080.1 mouse_genomes_project 11 104447970 104451827 + Mlx protein_coding processed_transcript MGP_LPJ_T0032367.1 MGP_LPJ_G0019080.1 mouse_genomes_project 11 104447980 104452888 + MGP_LPJ_P0032367 Mlx protein_coding protein_coding MGP_LPJ_T0032368.1 MGP_LPJ_G0019080.1 mouse_genomes_project 11 104447984 104449646 + MGP_LPJ_P0032368 Mlx protein_coding protein_coding MGP_LPJ_T0032369.1 MGP_LPJ_G0019080.1 mouse_genomes_project 11 104450342 104452199 + Mlx protein_coding processed_transcript MGP_LPJ_T0100117.1 MGP_LPJ_G0038380.1 mouse_genomes_project 11 771097 771196 + Gm24013 snoRNA snoRNA MGP_LPJ_T0028747.1 MGP_LPJ_G0018150.1 mouse_genomes_project 11 49674468 49678373 + 3010026O09Rik protein_coding processed_transcript MGP_LPJ_T0028748.1 MGP_LPJ_G0018150.1 mouse_genomes_project 11 49674873 49699903 + MGP_LPJ_P0028748 3010026O09Rik protein_coding protein_coding MGP_LPJ_T0028749.1 MGP_LPJ_G0018150.1 mouse_genomes_project 11 49674931 49696875 + MGP_LPJ_P0028749 3010026O09Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0033556.1 MGP_LPJ_G0019324.1 mouse_genomes_project 11 120764707 120767706 + MGP_LPJ_P0033556 Galr2 protein_coding protein_coding MGP_LPJ_T0033557.1 MGP_LPJ_G0019324.1 mouse_genomes_project 11 120765254 120767429 + Galr2 protein_coding processed_transcript MGP_LPJ_T0006256.1 MGP_LPJ_G0005226.1 mouse_genomes_project 11 50687502 50698302 + 9230009I02Rik lincRNA lincRNA MGP_LPJ_T0031913.1 MGP_LPJ_G0018934.1 mouse_genomes_project 11 100297269 100336770 + MGP_LPJ_P0031913 protein_coding protein_coding MGP_LPJ_T0031914.1 MGP_LPJ_G0018934.1 mouse_genomes_project 11 100314452 100315683 + protein_coding processed_transcript MGP_LPJ_T0017179.1 MGP_LPJ_G0015111.1 mouse_genomes_project 11 99740137 99754629 - Gm11523 processed_transcript lincRNA MGP_LPJ_T0017180.1 MGP_LPJ_G0015111.1 mouse_genomes_project 11 99740430 99754635 - Gm11523 processed_transcript lincRNA MGP_LPJ_T0017181.1 MGP_LPJ_G0015111.1 mouse_genomes_project 11 99740559 99754615 - Gm11523 processed_transcript antisense MGP_LPJ_T0009762.1 MGP_LPJ_G0007880.1 mouse_genomes_project 11 104747336 104747415 - Gm25593 miRNA miRNA MGP_LPJ_T0031206.1 MGP_LPJ_G0018761.1 mouse_genomes_project 11 85620415 85622692 + MGP_LPJ_P0031206 Wfdc17 protein_coding protein_coding MGP_LPJ_T0009701.1 MGP_LPJ_G0007819.1 mouse_genomes_project 11 60779574 60779692 - Gm27711 miRNA miRNA MGP_LPJ_T0100141.1 MGP_LPJ_G0038404.1 mouse_genomes_project 11 47949108 47949227 + Gm24422 snoRNA snoRNA MGP_LPJ_T0034151.1 MGP_LPJ_G0019440.1 mouse_genomes_project 11 125877602 125886331 - MGP_LPJ_P0034151 Sectm1a protein_coding protein_coding MGP_LPJ_T0034152.1 MGP_LPJ_G0019440.1 mouse_genomes_project 11 125877602 125886412 - MGP_LPJ_P0034152 Sectm1a protein_coding protein_coding MGP_LPJ_T0034153.1 MGP_LPJ_G0019440.1 mouse_genomes_project 11 125878110 125886328 - MGP_LPJ_P0034153 Sectm1a protein_coding protein_coding MGP_LPJ_T0034154.1 MGP_LPJ_G0019440.1 mouse_genomes_project 11 125878128 125886322 - MGP_LPJ_P0034154 Sectm1a protein_coding protein_coding MGP_LPJ_T0034155.1 MGP_LPJ_G0019440.1 mouse_genomes_project 11 125879229 125886317 - Sectm1a protein_coding processed_transcript MGP_LPJ_T0029375.1 MGP_LPJ_G0018330.1 mouse_genomes_project 11 61192364 61206875 + MGP_LPJ_P0029375 Llgl1 protein_coding protein_coding MGP_LPJ_T0029376.1 MGP_LPJ_G0018330.1 mouse_genomes_project 11 61192486 61206875 + MGP_LPJ_P0029376 Llgl1 protein_coding protein_coding MGP_LPJ_T0029377.1 MGP_LPJ_G0018330.1 mouse_genomes_project 11 61196910 61198783 + Llgl1 protein_coding retained_intron MGP_LPJ_T0031882.1 MGP_LPJ_G0018928.1 mouse_genomes_project 11 100008708 100028127 - MGP_LPJ_P0031882 Tbx21 protein_coding protein_coding MGP_LPJ_T0032165.1 MGP_LPJ_G0019000.1 mouse_genomes_project 11 102677358 102683028 - MGP_LPJ_P0032165 Krt40 protein_coding protein_coding MGP_LPJ_T0032166.1 MGP_LPJ_G0019000.1 mouse_genomes_project 11 102677358 102683028 - MGP_LPJ_P0032166 Krt40 protein_coding protein_coding MGP_LPJ_T0012728.1 MGP_LPJ_G0010819.1 mouse_genomes_project 11 102906952 102907105 + processed_pseudogene processed_pseudogene MGP_LPJ_T0033914.1 MGP_LPJ_G0019395.1 mouse_genomes_project 11 124843316 124845094 + MGP_LPJ_P0033914 1810043H04Rik protein_coding protein_coding MGP_LPJ_T0033915.1 MGP_LPJ_G0019395.1 mouse_genomes_project 11 124843332 124844752 + MGP_LPJ_P0033915 1810043H04Rik protein_coding protein_coding MGP_LPJ_T0033916.1 MGP_LPJ_G0019395.1 mouse_genomes_project 11 124843487 124844803 + 1810043H04Rik protein_coding retained_intron MGP_LPJ_T0100134.1 MGP_LPJ_G0038397.1 mouse_genomes_project 11 23624121 23624251 + Gm23514 snoRNA snoRNA MGP_LPJ_T0006346.1 MGP_LPJ_G0005293.1 mouse_genomes_project 11 99016835 99018085 + Gm11535 lincRNA lincRNA MGP_LPJ_T0030502.1 MGP_LPJ_G0018585.1 mouse_genomes_project 11 75252067 75264274 - MGP_LPJ_P0030502 Olfr139 protein_coding protein_coding MGP_LPJ_T0030503.1 MGP_LPJ_G0018585.1 mouse_genomes_project 11 75252067 75253015 - MGP_LPJ_P0030503 Olfr139 protein_coding protein_coding MGP_LPJ_T0030504.1 MGP_LPJ_G0018585.1 mouse_genomes_project 11 75258159 75261756 - Olfr139 protein_coding processed_transcript MGP_LPJ_T0033476.1 MGP_LPJ_G0019310.1 mouse_genomes_project 11 120434595 120467927 + MGP_LPJ_P0033476 Itgb4 protein_coding protein_coding MGP_LPJ_T0033477.1 MGP_LPJ_G0019310.1 mouse_genomes_project 11 120434611 120467926 + MGP_LPJ_P0033477 Itgb4 protein_coding protein_coding MGP_LPJ_T0033478.1 MGP_LPJ_G0019310.1 mouse_genomes_project 11 120434611 120467926 + MGP_LPJ_P0033478 Itgb4 protein_coding protein_coding MGP_LPJ_T0033479.1 MGP_LPJ_G0019310.1 mouse_genomes_project 11 120434729 120455135 + Itgb4 protein_coding processed_transcript MGP_LPJ_T0033480.1 MGP_LPJ_G0019310.1 mouse_genomes_project 11 120434865 120467927 + MGP_LPJ_P0033480 Itgb4 protein_coding protein_coding MGP_LPJ_T0033481.1 MGP_LPJ_G0019310.1 mouse_genomes_project 11 120437672 120467927 + MGP_LPJ_P0033481 Itgb4 protein_coding protein_coding MGP_LPJ_T0033482.1 MGP_LPJ_G0019310.1 mouse_genomes_project 11 120437672 120467927 + MGP_LPJ_P0033482 Itgb4 protein_coding protein_coding MGP_LPJ_T0033483.1 MGP_LPJ_G0019310.1 mouse_genomes_project 11 120450451 120451557 + Itgb4 protein_coding processed_transcript MGP_LPJ_T0033484.1 MGP_LPJ_G0019310.1 mouse_genomes_project 11 120451458 120452480 + Itgb4 protein_coding processed_transcript MGP_LPJ_T0033485.1 MGP_LPJ_G0019310.1 mouse_genomes_project 11 120453306 120454705 + Itgb4 protein_coding processed_transcript MGP_LPJ_T0032207.1 MGP_LPJ_G0019040.1 mouse_genomes_project 11 103378431 103382464 - MGP_LPJ_P0032207 Krt35 protein_coding protein_coding MGP_LPJ_T0032208.1 MGP_LPJ_G0019040.1 mouse_genomes_project 11 103378433 103382480 - Krt35 protein_coding retained_intron MGP_LPJ_T0012765.1 MGP_LPJ_G0010856.1 mouse_genomes_project 11 118655865 118656998 + processed_pseudogene processed_pseudogene MGP_LPJ_T0030553.1 MGP_LPJ_G0018603.1 mouse_genomes_project 11 76162381 76205485 - MGP_LPJ_P0030553 Sgsm2 protein_coding protein_coding MGP_LPJ_T0030554.1 MGP_LPJ_G0018603.1 mouse_genomes_project 11 76162386 76205485 - MGP_LPJ_P0030554 Sgsm2 protein_coding protein_coding MGP_LPJ_T0030555.1 MGP_LPJ_G0018603.1 mouse_genomes_project 11 76169639 76173578 - Sgsm2 protein_coding retained_intron MGP_LPJ_T0030556.1 MGP_LPJ_G0018603.1 mouse_genomes_project 11 76181447 76183111 - Sgsm2 protein_coding retained_intron MGP_LPJ_T0030557.1 MGP_LPJ_G0018603.1 mouse_genomes_project 11 76181457 76182407 - Sgsm2 protein_coding retained_intron MGP_LPJ_T0028878.1 MGP_LPJ_G0018185.1 mouse_genomes_project 11 51444379 51472843 + MGP_LPJ_P0028878 Sar1b protein_coding protein_coding MGP_LPJ_T0028879.1 MGP_LPJ_G0018185.1 mouse_genomes_project 11 51444386 51463771 + Sar1b protein_coding processed_transcript MGP_LPJ_T0028444.1 MGP_LPJ_G0018061.1 mouse_genomes_project 11 32825490 33388233 - MGP_LPJ_P0028444 Dock2 protein_coding protein_coding MGP_LPJ_T0028445.1 MGP_LPJ_G0018061.1 mouse_genomes_project 11 32829438 32830556 - Dock2 protein_coding retained_intron MGP_LPJ_T0028446.1 MGP_LPJ_G0018061.1 mouse_genomes_project 11 32871866 33388233 - MGP_LPJ_P0028446 Dock2 protein_coding protein_coding MGP_LPJ_T0028447.1 MGP_LPJ_G0018061.1 mouse_genomes_project 11 32907572 32912560 - Dock2 protein_coding retained_intron MGP_LPJ_T0028450.1 MGP_LPJ_G0018061.1 mouse_genomes_project 11 32961982 33288305 - MGP_LPJ_P0028450 Dock2 protein_coding protein_coding MGP_LPJ_T0028451.1 MGP_LPJ_G0018061.1 mouse_genomes_project 11 33036458 33388224 - Dock2 protein_coding retained_intron MGP_LPJ_T0028452.1 MGP_LPJ_G0018061.1 mouse_genomes_project 11 33036458 33388233 - MGP_LPJ_P0028452 Dock2 protein_coding nonsense_mediated_decay MGP_LPJ_T0032542.1 MGP_LPJ_G0019118.1 mouse_genomes_project 11 105457709 105488441 - Mpp3 protein_coding processed_transcript MGP_LPJ_T0032543.1 MGP_LPJ_G0019118.1 mouse_genomes_project 11 105457709 105487596 - MGP_LPJ_P0032543 Mpp3 protein_coding protein_coding MGP_LPJ_T0032544.1 MGP_LPJ_G0019118.1 mouse_genomes_project 11 105457709 105489998 - MGP_LPJ_P0032544 Mpp3 protein_coding protein_coding MGP_LPJ_T0032545.1 MGP_LPJ_G0019118.1 mouse_genomes_project 11 105457709 105488462 - MGP_LPJ_P0032545 Mpp3 protein_coding protein_coding MGP_LPJ_T0032546.1 MGP_LPJ_G0019118.1 mouse_genomes_project 11 105468919 105470701 - Mpp3 protein_coding retained_intron MGP_LPJ_T0032547.1 MGP_LPJ_G0019118.1 mouse_genomes_project 11 105477657 105488444 - MGP_LPJ_P0032547 Mpp3 protein_coding protein_coding MGP_LPJ_T0032548.1 MGP_LPJ_G0019118.1 mouse_genomes_project 11 105481407 105488441 - Mpp3 protein_coding processed_transcript MGP_LPJ_T0032549.1 MGP_LPJ_G0019118.1 mouse_genomes_project 11 105484941 105487359 - Mpp3 protein_coding processed_transcript MGP_LPJ_T0032550.1 MGP_LPJ_G0019118.1 mouse_genomes_project 11 105486888 105488262 - Mpp3 protein_coding processed_transcript MGP_LPJ_T0098898.1 MGP_LPJ_G0037161.1 mouse_genomes_project 11 37576309 37576416 - Gm23520 snRNA snRNA MGP_LPJ_T0030868.1 MGP_LPJ_G0018668.1 mouse_genomes_project 11 79683487 79693981 - Nek8 protein_coding retained_intron MGP_LPJ_T0030869.1 MGP_LPJ_G0018668.1 mouse_genomes_project 11 79683487 79694045 - MGP_LPJ_P0030869 Nek8 protein_coding protein_coding MGP_LPJ_T0030870.1 MGP_LPJ_G0018668.1 mouse_genomes_project 11 79683491 79684769 - Nek8 protein_coding retained_intron MGP_LPJ_T0030871.1 MGP_LPJ_G0018668.1 mouse_genomes_project 11 79683902 79693997 - Nek8 protein_coding retained_intron MGP_LPJ_T0030872.1 MGP_LPJ_G0018668.1 mouse_genomes_project 11 79684635 79685415 - Nek8 protein_coding retained_intron MGP_LPJ_T0030873.1 MGP_LPJ_G0018668.1 mouse_genomes_project 11 79686353 79687210 - Nek8 protein_coding retained_intron MGP_LPJ_T0030874.1 MGP_LPJ_G0018668.1 mouse_genomes_project 11 79687372 79693984 - Nek8 protein_coding retained_intron MGP_LPJ_T0030875.1 MGP_LPJ_G0018668.1 mouse_genomes_project 11 79688568 79694004 - MGP_LPJ_P0030875 Nek8 protein_coding protein_coding MGP_LPJ_T0027962.1 MGP_LPJ_G0017947.1 mouse_genomes_project 11 6259950 6280361 - MGP_LPJ_P0027962 Hus1 protein_coding nonsense_mediated_decay MGP_LPJ_T0027963.1 MGP_LPJ_G0017947.1 mouse_genomes_project 11 6259950 6280392 - MGP_LPJ_P0027963 Hus1 protein_coding protein_coding MGP_LPJ_T0027964.1 MGP_LPJ_G0017947.1 mouse_genomes_project 11 6262169 6280329 - Hus1 protein_coding retained_intron MGP_LPJ_T0027965.1 MGP_LPJ_G0017947.1 mouse_genomes_project 11 6264153 6280365 - Hus1 protein_coding retained_intron MGP_LPJ_T0027966.1 MGP_LPJ_G0017947.1 mouse_genomes_project 11 6265603 6279883 - Hus1 protein_coding retained_intron MGP_LPJ_T0027967.1 MGP_LPJ_G0017947.1 mouse_genomes_project 11 6275176 6280329 - Hus1 protein_coding processed_transcript MGP_LPJ_T0029373.1 MGP_LPJ_G0018329.1 mouse_genomes_project 11 61026348 61045070 + Alkbh5 protein_coding processed_transcript MGP_LPJ_T0029374.1 MGP_LPJ_G0018329.1 mouse_genomes_project 11 61027945 61049164 + MGP_LPJ_P0029374 Alkbh5 protein_coding protein_coding MGP_LPJ_T0029890.1 MGP_LPJ_G0018443.1 mouse_genomes_project 11 70599322 70610972 + MGP_LPJ_P0029890 Trp53 protein_coding protein_coding MGP_LPJ_T0029891.1 MGP_LPJ_G0018443.1 mouse_genomes_project 11 70599322 70610972 + MGP_LPJ_P0029891 Trp53 protein_coding protein_coding MGP_LPJ_T0029892.1 MGP_LPJ_G0018443.1 mouse_genomes_project 11 70599322 70610973 + MGP_LPJ_P0029892 Trp53 protein_coding protein_coding MGP_LPJ_T0029893.1 MGP_LPJ_G0018443.1 mouse_genomes_project 11 70599365 70609493 + Trp53 protein_coding processed_transcript MGP_LPJ_T0029894.1 MGP_LPJ_G0018443.1 mouse_genomes_project 11 70599368 70610973 + MGP_LPJ_P0029894 Trp53 protein_coding protein_coding MGP_LPJ_T0029895.1 MGP_LPJ_G0018443.1 mouse_genomes_project 11 70607645 70608772 + Trp53 protein_coding processed_transcript MGP_LPJ_T0027981.1 MGP_LPJ_G0017952.1 mouse_genomes_project 11 8500339 8655099 + MGP_LPJ_P0027981 Vwc2 protein_coding protein_coding MGP_LPJ_T0027982.1 MGP_LPJ_G0017952.1 mouse_genomes_project 11 8500860 8665653 + MGP_LPJ_P0027982 Vwc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0027983.1 MGP_LPJ_G0017952.1 mouse_genomes_project 11 8501967 8663360 + MGP_LPJ_P0027983 Vwc2 protein_coding protein_coding MGP_LPJ_T0027984.1 MGP_LPJ_G0017952.1 mouse_genomes_project 11 8502601 8514256 + Vwc2 protein_coding processed_transcript MGP_LPJ_T0100178.1 MGP_LPJ_G0038441.1 mouse_genomes_project 11 102092632 102092747 + Gm26394 snoRNA snoRNA MGP_LPJ_T0033202.1 MGP_LPJ_G0019254.1 mouse_genomes_project 11 117925677 117952584 - MGP_LPJ_P0033202 Fam104a protein_coding protein_coding MGP_LPJ_T0029665.1 MGP_LPJ_G0018390.1 mouse_genomes_project 11 67852126 67862291 + MGP_LPJ_P0029665 Tmem220 protein_coding protein_coding MGP_LPJ_T0029666.1 MGP_LPJ_G0018390.1 mouse_genomes_project 11 67852126 67861775 + MGP_LPJ_P0029666 Tmem220 protein_coding protein_coding MGP_LPJ_T0006268.1 MGP_LPJ_G0005237.1 mouse_genomes_project 11 61378725 61388042 + Gm26534 lincRNA lincRNA MGP_LPJ_T0028261.1 MGP_LPJ_G0018015.1 mouse_genomes_project 11 27470888 27501079 - MGP_LPJ_P0028261 Cfap36 protein_coding protein_coding MGP_LPJ_T0028262.1 MGP_LPJ_G0018015.1 mouse_genomes_project 11 27478993 27500955 - Cfap36 protein_coding retained_intron MGP_LPJ_T0028263.1 MGP_LPJ_G0018015.1 mouse_genomes_project 11 27483816 27500589 - MGP_LPJ_P0028263 Cfap36 protein_coding protein_coding MGP_LPJ_T0028264.1 MGP_LPJ_G0018015.1 mouse_genomes_project 11 27497485 27500735 - Cfap36 protein_coding retained_intron MGP_LPJ_T0028265.1 MGP_LPJ_G0018015.1 mouse_genomes_project 11 27498387 27500859 - Cfap36 protein_coding retained_intron MGP_LPJ_T0017190.1 MGP_LPJ_G0015116.1 mouse_genomes_project 11 100596558 100614977 - Gm11613 processed_transcript processed_transcript MGP_LPJ_T0033163.1 MGP_LPJ_G0019246.1 mouse_genomes_project 11 114287845 114363036 - MGP_LPJ_P0033163 Abca5 protein_coding protein_coding MGP_LPJ_T0033164.1 MGP_LPJ_G0019246.1 mouse_genomes_project 11 114306405 114362980 - MGP_LPJ_P0033164 Abca5 protein_coding protein_coding MGP_LPJ_T0033165.1 MGP_LPJ_G0019246.1 mouse_genomes_project 11 114332241 114363003 - Abca5 protein_coding retained_intron MGP_LPJ_T0033166.1 MGP_LPJ_G0019246.1 mouse_genomes_project 11 114342968 114362998 - MGP_LPJ_P0033166 Abca5 protein_coding protein_coding MGP_LPJ_T0033167.1 MGP_LPJ_G0019246.1 mouse_genomes_project 11 114349712 114363074 - Abca5 protein_coding processed_transcript MGP_LPJ_T0029760.1 MGP_LPJ_G0018413.1 mouse_genomes_project 11 69850315 69858350 + MGP_LPJ_P0029760 Rnf222 protein_coding protein_coding MGP_LPJ_T0012702.1 MGP_LPJ_G0010793.1 mouse_genomes_project 11 90107204 90107377 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012710.1 MGP_LPJ_G0010801.1 mouse_genomes_project 11 95282649 95283250 - processed_pseudogene processed_pseudogene MGP_LPJ_T0030972.1 MGP_LPJ_G0018691.1 mouse_genomes_project 11 80105869 80256131 - MGP_LPJ_P0030972 Nlk protein_coding protein_coding MGP_LPJ_T0030973.1 MGP_LPJ_G0018691.1 mouse_genomes_project 11 80106103 80107622 - Nlk protein_coding processed_transcript MGP_LPJ_T0030974.1 MGP_LPJ_G0018691.1 mouse_genomes_project 11 80106115 80111105 - MGP_LPJ_P0030974 Nlk protein_coding protein_coding MGP_LPJ_T0030975.1 MGP_LPJ_G0018691.1 mouse_genomes_project 11 80158799 80255252 - Nlk protein_coding retained_intron MGP_LPJ_T0031890.1 MGP_LPJ_G0018931.1 mouse_genomes_project 11 100126221 100208349 - MGP_LPJ_P0031890 Npepps protein_coding protein_coding MGP_LPJ_T0031891.1 MGP_LPJ_G0018931.1 mouse_genomes_project 11 100126221 100208457 - MGP_LPJ_P0031891 Npepps protein_coding protein_coding MGP_LPJ_T0031892.1 MGP_LPJ_G0018931.1 mouse_genomes_project 11 100126223 100208468 - MGP_LPJ_P0031892 Npepps protein_coding protein_coding MGP_LPJ_T0031893.1 MGP_LPJ_G0018931.1 mouse_genomes_project 11 100127287 100132853 - Npepps protein_coding retained_intron MGP_LPJ_T0031894.1 MGP_LPJ_G0018931.1 mouse_genomes_project 11 100127312 100166243 - Npepps protein_coding retained_intron MGP_LPJ_T0031895.1 MGP_LPJ_G0018931.1 mouse_genomes_project 11 100127312 100208295 - MGP_LPJ_P0031895 Npepps protein_coding protein_coding MGP_LPJ_T0031896.1 MGP_LPJ_G0018931.1 mouse_genomes_project 11 100127537 100133686 - Npepps protein_coding retained_intron MGP_LPJ_T0031897.1 MGP_LPJ_G0018931.1 mouse_genomes_project 11 100133927 100145375 - Npepps protein_coding retained_intron MGP_LPJ_T0031898.1 MGP_LPJ_G0018931.1 mouse_genomes_project 11 100143715 100154197 - Npepps protein_coding retained_intron MGP_LPJ_T0031899.1 MGP_LPJ_G0018931.1 mouse_genomes_project 11 100145004 100148773 - Npepps protein_coding retained_intron MGP_LPJ_T0031900.1 MGP_LPJ_G0018931.1 mouse_genomes_project 11 100151598 100158932 - Npepps protein_coding retained_intron MGP_LPJ_T0031901.1 MGP_LPJ_G0018931.1 mouse_genomes_project 11 100153925 100166255 - Npepps protein_coding processed_transcript MGP_LPJ_T0031902.1 MGP_LPJ_G0018931.1 mouse_genomes_project 11 100153930 100167160 - MGP_LPJ_P0031902 Npepps protein_coding protein_coding MGP_LPJ_T0031903.1 MGP_LPJ_G0018931.1 mouse_genomes_project 11 100158904 100194221 - MGP_LPJ_P0031903 Npepps protein_coding nonsense_mediated_decay MGP_LPJ_T0031904.1 MGP_LPJ_G0018931.1 mouse_genomes_project 11 100166337 100167523 - Npepps protein_coding retained_intron MGP_LPJ_T0031905.1 MGP_LPJ_G0018931.1 mouse_genomes_project 11 100167010 100208271 - MGP_LPJ_P0031905 Npepps protein_coding protein_coding MGP_LPJ_T0031906.1 MGP_LPJ_G0018931.1 mouse_genomes_project 11 100168804 100208333 - MGP_LPJ_P0031906 Npepps protein_coding nonsense_mediated_decay MGP_LPJ_T0031907.1 MGP_LPJ_G0018931.1 mouse_genomes_project 11 100182485 100208456 - Npepps protein_coding retained_intron MGP_LPJ_T0031908.1 MGP_LPJ_G0018931.1 mouse_genomes_project 11 100183156 100194213 - MGP_LPJ_P0031908 Npepps protein_coding nonsense_mediated_decay MGP_LPJ_T0012658.1 MGP_LPJ_G0010749.1 mouse_genomes_project 11 73989521 73991494 + processed_pseudogene processed_pseudogene MGP_LPJ_T0030944.1 MGP_LPJ_G0018684.1 mouse_genomes_project 11 80003982 80030825 - MGP_LPJ_P0030944 Sarm1 protein_coding protein_coding MGP_LPJ_T0030945.1 MGP_LPJ_G0018684.1 mouse_genomes_project 11 80004865 80016292 - Sarm1 protein_coding retained_intron MGP_LPJ_T0030946.1 MGP_LPJ_G0018684.1 mouse_genomes_project 11 80004943 80031126 - MGP_LPJ_P0030946 Sarm1 protein_coding protein_coding MGP_LPJ_T0030947.1 MGP_LPJ_G0018684.1 mouse_genomes_project 11 80015327 80019789 - Sarm1 protein_coding retained_intron MGP_LPJ_T0030948.1 MGP_LPJ_G0018684.1 mouse_genomes_project 11 80023448 80031058 - Sarm1 protein_coding processed_transcript MGP_LPJ_T0006302.1 MGP_LPJ_G0005264.1 mouse_genomes_project 11 79414789 79431695 - Gm11190 lincRNA lincRNA MGP_LPJ_T0032138.1 MGP_LPJ_G0018986.1 mouse_genomes_project 11 102167117 102190937 - MGP_LPJ_P0032138 Tns4 protein_coding protein_coding MGP_LPJ_T0032139.1 MGP_LPJ_G0018986.1 mouse_genomes_project 11 102169601 102175396 - Tns4 protein_coding processed_transcript MGP_LPJ_T0032140.1 MGP_LPJ_G0018986.1 mouse_genomes_project 11 102172210 102176873 - Tns4 protein_coding retained_intron MGP_LPJ_T0032141.1 MGP_LPJ_G0018986.1 mouse_genomes_project 11 102187095 102190916 - Tns4 protein_coding retained_intron MGP_LPJ_T0012581.1 MGP_LPJ_G0010672.1 mouse_genomes_project 11 47994565 47995515 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009769.1 MGP_LPJ_G0007887.1 mouse_genomes_project 11 108057899 108058044 - miRNA miRNA MGP_LPJ_T0027729.1 MGP_LPJ_G0017893.1 mouse_genomes_project 11 1533662 1654445 - MGP_LPJ_P0027729 Mtmr3 protein_coding protein_coding MGP_LPJ_T0027730.1 MGP_LPJ_G0017893.1 mouse_genomes_project 11 1533669 1541161 - Mtmr3 protein_coding processed_transcript MGP_LPJ_T0027731.1 MGP_LPJ_G0017893.1 mouse_genomes_project 11 1533669 1602084 - MGP_LPJ_P0027731 Mtmr3 protein_coding protein_coding MGP_LPJ_T0027732.1 MGP_LPJ_G0017893.1 mouse_genomes_project 11 1533684 1583764 - MGP_LPJ_P0027732 Mtmr3 protein_coding protein_coding MGP_LPJ_T0027733.1 MGP_LPJ_G0017893.1 mouse_genomes_project 11 1535353 1654493 - MGP_LPJ_P0027733 Mtmr3 protein_coding nonsense_mediated_decay MGP_LPJ_T0027734.1 MGP_LPJ_G0017893.1 mouse_genomes_project 11 1535546 1583764 - MGP_LPJ_P0027734 Mtmr3 protein_coding protein_coding MGP_LPJ_T0027735.1 MGP_LPJ_G0017893.1 mouse_genomes_project 11 1544601 1546113 - Mtmr3 protein_coding processed_transcript MGP_LPJ_T0028678.1 MGP_LPJ_G0018130.1 mouse_genomes_project 11 48587902 48603163 + MGP_LPJ_P0028678 Zfp62 protein_coding protein_coding MGP_LPJ_T0028679.1 MGP_LPJ_G0018130.1 mouse_genomes_project 11 48587906 48599890 + MGP_LPJ_P0028679 Zfp62 protein_coding protein_coding MGP_LPJ_T0028680.1 MGP_LPJ_G0018130.1 mouse_genomes_project 11 48588095 48598246 + Zfp62 protein_coding processed_transcript MGP_LPJ_T0028681.1 MGP_LPJ_G0018130.1 mouse_genomes_project 11 48588095 48599520 + Zfp62 protein_coding retained_intron MGP_LPJ_T0028682.1 MGP_LPJ_G0018130.1 mouse_genomes_project 11 48588095 48599721 + MGP_LPJ_P0028682 Zfp62 protein_coding protein_coding MGP_LPJ_T0028683.1 MGP_LPJ_G0018130.1 mouse_genomes_project 11 48588108 48603426 + MGP_LPJ_P0028683 Zfp62 protein_coding protein_coding MGP_LPJ_T0028684.1 MGP_LPJ_G0018130.1 mouse_genomes_project 11 48588116 48600280 + MGP_LPJ_P0028684 Zfp62 protein_coding protein_coding MGP_LPJ_T0028685.1 MGP_LPJ_G0018130.1 mouse_genomes_project 11 48588344 48599787 + MGP_LPJ_P0028685 Zfp62 protein_coding protein_coding MGP_LPJ_T0028686.1 MGP_LPJ_G0018130.1 mouse_genomes_project 11 48588931 48602373 + MGP_LPJ_P0028686 Zfp62 protein_coding protein_coding MGP_LPJ_T0028687.1 MGP_LPJ_G0018130.1 mouse_genomes_project 11 48597297 48603419 + MGP_LPJ_P0028687 Zfp62 protein_coding protein_coding MGP_LPJ_T0028688.1 MGP_LPJ_G0018130.1 mouse_genomes_project 11 48598201 48599933 + MGP_LPJ_P0028688 Zfp62 protein_coding protein_coding MGP_LPJ_T0028689.1 MGP_LPJ_G0018130.1 mouse_genomes_project 11 48599158 48603419 + MGP_LPJ_P0028689 Zfp62 protein_coding protein_coding MGP_LPJ_T0012542.1 MGP_LPJ_G0010633.1 mouse_genomes_project 11 28906157 28906653 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003202.1 MGP_LPJ_G0002971.1 mouse_genomes_project 11 59806805 59811250 + Gm15755 antisense antisense MGP_LPJ_T0009699.1 MGP_LPJ_G0007817.1 mouse_genomes_project 11 60673038 60673118 - Mir6921 miRNA miRNA MGP_LPJ_T0006394.1 MGP_LPJ_G0005327.1 mouse_genomes_project 11 122110880 122120144 + Gm11734 lincRNA lincRNA MGP_LPJ_T0028663.1 MGP_LPJ_G0018124.1 mouse_genomes_project 11 48464913 48473490 + Ifi47 protein_coding processed_transcript MGP_LPJ_T0028665.1 MGP_LPJ_G0018124.1 mouse_genomes_project 11 48465252 48475026 + MGP_LPJ_P0028665 Ifi47 protein_coding protein_coding MGP_LPJ_T0012446.1 MGP_LPJ_G0010537.1 mouse_genomes_project 11 39577 55653 - processed_pseudogene processed_pseudogene MGP_LPJ_T0032720.1 MGP_LPJ_G0019146.1 mouse_genomes_project 11 106381720 106383912 + MGP_LPJ_P0032720 Higd1b protein_coding protein_coding MGP_LPJ_T0032721.1 MGP_LPJ_G0019146.1 mouse_genomes_project 11 106382167 106383912 + MGP_LPJ_P0032721 Higd1b protein_coding protein_coding MGP_LPJ_T0032722.1 MGP_LPJ_G0019146.1 mouse_genomes_project 11 106382317 106383912 + MGP_LPJ_P0032722 Higd1b protein_coding protein_coding MGP_LPJ_T0003219.1 MGP_LPJ_G0002985.1 mouse_genomes_project 11 63368607 63371988 - antisense antisense MGP_LPJ_T0030160.1 MGP_LPJ_G0018498.1 mouse_genomes_project 11 71497309 71514428 - MGP_LPJ_P0030160 Pelp1 protein_coding protein_coding MGP_LPJ_T0030161.1 MGP_LPJ_G0018498.1 mouse_genomes_project 11 71507039 71514431 - MGP_LPJ_P0030161 Pelp1 protein_coding protein_coding MGP_LPJ_T0031865.1 MGP_LPJ_G0018922.1 mouse_genomes_project 11 99847267 99872585 - MGP_LPJ_P0031865 Sp2 protein_coding protein_coding MGP_LPJ_T0031866.1 MGP_LPJ_G0018922.1 mouse_genomes_project 11 99848397 99872586 - MGP_LPJ_P0031866 Sp2 protein_coding unknown_likely_coding MGP_LPJ_T0012460.1 MGP_LPJ_G0010551.1 mouse_genomes_project 11 3353366 3353722 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101797.1 MGP_LPJ_G0039835.1 mouse_genomes_project 11 121275319 121284438 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0033124.1 MGP_LPJ_G0019236.1 mouse_genomes_project 11 113421573 113445659 - MGP_LPJ_P0033124 Slc16a6 protein_coding protein_coding MGP_LPJ_T0033125.1 MGP_LPJ_G0019236.1 mouse_genomes_project 11 113424361 113445355 - MGP_LPJ_P0033125 Slc16a6 protein_coding protein_coding MGP_LPJ_T0033126.1 MGP_LPJ_G0019236.1 mouse_genomes_project 11 113431357 113444749 - MGP_LPJ_P0033126 Slc16a6 protein_coding protein_coding MGP_LPJ_T0033127.1 MGP_LPJ_G0019236.1 mouse_genomes_project 11 113438763 113445260 - Slc16a6 protein_coding processed_transcript MGP_LPJ_T0032736.1 MGP_LPJ_G0019148.1 mouse_genomes_project 11 106428758 106432759 + MGP_LPJ_P0032736 Ccdc103 protein_coding protein_coding MGP_LPJ_T0032737.1 MGP_LPJ_G0019148.1 mouse_genomes_project 11 106428799 106432072 + MGP_LPJ_P0032737 Ccdc103 protein_coding protein_coding MGP_LPJ_T0100128.1 MGP_LPJ_G0038391.1 mouse_genomes_project 11 12961616 12961746 + Gm25490 snoRNA snoRNA MGP_LPJ_T0009775.1 MGP_LPJ_G0007893.1 mouse_genomes_project 11 111880770 111880839 + Mir7223 miRNA miRNA MGP_LPJ_T0030584.1 MGP_LPJ_G0018609.1 mouse_genomes_project 11 76503410 76517825 - MGP_LPJ_P0030584 Dph1 protein_coding protein_coding MGP_LPJ_T0030585.1 MGP_LPJ_G0018609.1 mouse_genomes_project 11 76503463 76509076 - Dph1 protein_coding retained_intron MGP_LPJ_T0030587.1 MGP_LPJ_G0018609.1 mouse_genomes_project 11 76504063 76507077 - Dph1 protein_coding processed_transcript MGP_LPJ_T0030588.1 MGP_LPJ_G0018609.1 mouse_genomes_project 11 76504956 76509268 - Dph1 protein_coding processed_transcript MGP_LPJ_T0030589.1 MGP_LPJ_G0018609.1 mouse_genomes_project 11 76506589 76518547 - MGP_LPJ_P0030589 Dph1 protein_coding protein_coding MGP_LPJ_T0030071.1 MGP_LPJ_G0018481.1 mouse_genomes_project 11 71071352 71075486 + MGP_LPJ_P0030071 Phf23 protein_coding protein_coding MGP_LPJ_T0030072.1 MGP_LPJ_G0018481.1 mouse_genomes_project 11 71071470 71073853 + Phf23 protein_coding retained_intron MGP_LPJ_T0030073.1 MGP_LPJ_G0018481.1 mouse_genomes_project 11 71071496 71075483 + MGP_LPJ_P0030073 Phf23 protein_coding protein_coding MGP_LPJ_T0030074.1 MGP_LPJ_G0018481.1 mouse_genomes_project 11 71072207 71074228 + MGP_LPJ_P0030074 Phf23 protein_coding protein_coding MGP_LPJ_T0030075.1 MGP_LPJ_G0018481.1 mouse_genomes_project 11 71072417 71073973 + Phf23 protein_coding processed_transcript MGP_LPJ_T0030076.1 MGP_LPJ_G0018481.1 mouse_genomes_project 11 71072433 71073874 + Phf23 protein_coding processed_transcript MGP_LPJ_T0032452.1 MGP_LPJ_G0019100.1 mouse_genomes_project 11 104811995 104822528 - MGP_LPJ_P0032452 Aarsd1 protein_coding protein_coding MGP_LPJ_T0032454.1 MGP_LPJ_G0019100.1 mouse_genomes_project 11 104815936 104822297 - Aarsd1 protein_coding processed_transcript MGP_LPJ_T0032455.1 MGP_LPJ_G0019100.1 mouse_genomes_project 11 104816537 104822295 - Aarsd1 protein_coding retained_intron MGP_LPJ_T0032456.1 MGP_LPJ_G0019100.1 mouse_genomes_project 11 104818736 104819630 - Aarsd1 protein_coding retained_intron MGP_LPJ_T0032457.1 MGP_LPJ_G0019100.1 mouse_genomes_project 11 104821660 104822319 - Aarsd1 protein_coding retained_intron MGP_LPJ_T0027608.1 MGP_LPJ_G0017866.1 mouse_genomes_project 11 302679 331087 - Limk2 protein_coding processed_transcript MGP_LPJ_T0027609.1 MGP_LPJ_G0017866.1 mouse_genomes_project 11 302679 371955 - MGP_LPJ_P0027609 Limk2 protein_coding protein_coding MGP_LPJ_T0027610.1 MGP_LPJ_G0017866.1 mouse_genomes_project 11 302679 331087 - MGP_LPJ_P0027610 Limk2 protein_coding protein_coding MGP_LPJ_T0027611.1 MGP_LPJ_G0017866.1 mouse_genomes_project 11 304163 330732 - MGP_LPJ_P0027611 Limk2 protein_coding protein_coding MGP_LPJ_T0027612.1 MGP_LPJ_G0017866.1 mouse_genomes_project 11 308452 312597 - Limk2 protein_coding processed_transcript MGP_LPJ_T0027613.1 MGP_LPJ_G0017866.1 mouse_genomes_project 11 312549 315652 - Limk2 protein_coding processed_transcript MGP_LPJ_T0027614.1 MGP_LPJ_G0017866.1 mouse_genomes_project 11 313187 315987 - Limk2 protein_coding processed_transcript MGP_LPJ_T0027615.1 MGP_LPJ_G0017866.1 mouse_genomes_project 11 315651 371955 - Limk2 protein_coding processed_transcript MGP_LPJ_T0027616.1 MGP_LPJ_G0017866.1 mouse_genomes_project 11 315968 316520 - Limk2 protein_coding processed_transcript MGP_LPJ_T0027617.1 MGP_LPJ_G0017866.1 mouse_genomes_project 11 318011 328873 - Limk2 protein_coding processed_transcript MGP_LPJ_T0027618.1 MGP_LPJ_G0017866.1 mouse_genomes_project 11 320294 331046 - Limk2 protein_coding processed_transcript MGP_LPJ_T0027619.1 MGP_LPJ_G0017866.1 mouse_genomes_project 11 358479 371970 - Limk2 protein_coding processed_transcript MGP_LPJ_T0009664.1 MGP_LPJ_G0007782.1 mouse_genomes_project 11 2134131 2134235 + miRNA miRNA MGP_LPJ_T0031863.1 MGP_LPJ_G0018921.1 mouse_genomes_project 11 99829930 99837707 - Pnpo protein_coding processed_transcript MGP_LPJ_T0031864.1 MGP_LPJ_G0018921.1 mouse_genomes_project 11 99829932 99837796 - MGP_LPJ_P0031864 Pnpo protein_coding protein_coding MGP_LPJ_T0030458.1 MGP_LPJ_G0018562.1 mouse_genomes_project 11 74396007 74421923 + MGP_LPJ_P0030458 Shpk protein_coding protein_coding MGP_LPJ_T0030459.1 MGP_LPJ_G0018562.1 mouse_genomes_project 11 74396007 74421914 + MGP_LPJ_P0030459 Shpk protein_coding nonsense_mediated_decay MGP_LPJ_T0003216.1 MGP_LPJ_G0002983.1 mouse_genomes_project 11 63208790 63210773 + Lrrc75aos2 antisense antisense MGP_LPJ_T0003217.1 MGP_LPJ_G0002983.1 mouse_genomes_project 11 63208791 63210048 + Lrrc75aos2 antisense antisense MGP_LPJ_T0009688.1 MGP_LPJ_G0007806.1 mouse_genomes_project 11 49560837 49560935 + Mir340 miRNA miRNA MGP_LPJ_T0031056.1 MGP_LPJ_G0018713.1 mouse_genomes_project 11 81973550 82034910 + MGP_LPJ_P0031056 Rhbdl3 protein_coding protein_coding MGP_LPJ_T0031057.1 MGP_LPJ_G0018713.1 mouse_genomes_project 11 81998825 82003294 + Rhbdl3 protein_coding retained_intron MGP_LPJ_T0031058.1 MGP_LPJ_G0018713.1 mouse_genomes_project 11 82025466 82032637 + Rhbdl3 protein_coding retained_intron MGP_LPJ_T0033719.1 MGP_LPJ_G0019354.1 mouse_genomes_project 11 122416298 122448028 + MGP_LPJ_P0033719 Gm20708 protein_coding protein_coding MGP_LPJ_T0028724.1 MGP_LPJ_G0018146.1 mouse_genomes_project 11 49331704 49371266 + MGP_LPJ_P0028724 Mapk9 protein_coding protein_coding MGP_LPJ_T0028725.1 MGP_LPJ_G0018146.1 mouse_genomes_project 11 49331704 49371266 + MGP_LPJ_P0028725 Mapk9 protein_coding protein_coding MGP_LPJ_T0028726.1 MGP_LPJ_G0018146.1 mouse_genomes_project 11 49331704 49371266 + MGP_LPJ_P0028726 Mapk9 protein_coding protein_coding MGP_LPJ_T0028727.1 MGP_LPJ_G0018146.1 mouse_genomes_project 11 49331706 49371266 + MGP_LPJ_P0028727 Mapk9 protein_coding protein_coding MGP_LPJ_T0028728.1 MGP_LPJ_G0018146.1 mouse_genomes_project 11 49331724 49360585 + Mapk9 protein_coding processed_transcript MGP_LPJ_T0028729.1 MGP_LPJ_G0018146.1 mouse_genomes_project 11 49331846 49358356 + Mapk9 protein_coding processed_transcript MGP_LPJ_T0028730.1 MGP_LPJ_G0018146.1 mouse_genomes_project 11 49339166 49371256 + MGP_LPJ_P0028730 Mapk9 protein_coding protein_coding MGP_LPJ_T0028731.1 MGP_LPJ_G0018146.1 mouse_genomes_project 11 49339183 49359284 + Mapk9 protein_coding processed_transcript MGP_LPJ_T0028732.1 MGP_LPJ_G0018146.1 mouse_genomes_project 11 49339210 49368155 + MGP_LPJ_P0028732 Mapk9 protein_coding protein_coding MGP_LPJ_T0028733.1 MGP_LPJ_G0018146.1 mouse_genomes_project 11 49339210 49368155 + MGP_LPJ_P0028733 Mapk9 protein_coding protein_coding MGP_LPJ_T0032123.1 MGP_LPJ_G0018983.1 mouse_genomes_project 11 102065920 102066757 - MGP_LPJ_P0032123 Gjd3 protein_coding protein_coding MGP_LPJ_T0012667.1 MGP_LPJ_G0010758.1 mouse_genomes_project 11 76757219 76757619 + processed_pseudogene processed_pseudogene MGP_LPJ_T0031873.1 MGP_LPJ_G0018925.1 mouse_genomes_project 11 99940682 99947476 - MGP_LPJ_P0031873 Lrrc46 protein_coding protein_coding MGP_LPJ_T0100140.1 MGP_LPJ_G0038403.1 mouse_genomes_project 11 44752979 44753111 + Gm22284 snoRNA snoRNA MGP_LPJ_T0032072.1 MGP_LPJ_G0018974.1 mouse_genomes_project 11 101756987 101782045 - Med24 protein_coding retained_intron MGP_LPJ_T0032073.1 MGP_LPJ_G0018974.1 mouse_genomes_project 11 101756987 101782646 - MGP_LPJ_P0032073 Med24 protein_coding protein_coding MGP_LPJ_T0032074.1 MGP_LPJ_G0018974.1 mouse_genomes_project 11 101757239 101758877 - Med24 protein_coding retained_intron MGP_LPJ_T0032075.1 MGP_LPJ_G0018974.1 mouse_genomes_project 11 101757296 101782621 - MGP_LPJ_P0032075 Med24 protein_coding protein_coding MGP_LPJ_T0032076.1 MGP_LPJ_G0018974.1 mouse_genomes_project 11 101757296 101782578 - MGP_LPJ_P0032076 Med24 protein_coding nonsense_mediated_decay MGP_LPJ_T0032077.1 MGP_LPJ_G0018974.1 mouse_genomes_project 11 101758823 101759648 - Med24 protein_coding retained_intron MGP_LPJ_T0032078.1 MGP_LPJ_G0018974.1 mouse_genomes_project 11 101759662 101760400 - Med24 protein_coding processed_transcript MGP_LPJ_T0032079.1 MGP_LPJ_G0018974.1 mouse_genomes_project 11 101761238 101782629 - Med24 protein_coding retained_intron MGP_LPJ_T0032080.1 MGP_LPJ_G0018974.1 mouse_genomes_project 11 101762042 101763463 - Med24 protein_coding retained_intron MGP_LPJ_T0032081.1 MGP_LPJ_G0018974.1 mouse_genomes_project 11 101771123 101772024 - Med24 protein_coding processed_transcript MGP_LPJ_T0032082.1 MGP_LPJ_G0018974.1 mouse_genomes_project 11 101771764 101782585 - MGP_LPJ_P0032082 Med24 protein_coding protein_coding MGP_LPJ_T0032083.1 MGP_LPJ_G0018974.1 mouse_genomes_project 11 101771851 101782614 - Med24 protein_coding retained_intron MGP_LPJ_T0031941.1 MGP_LPJ_G0018941.1 mouse_genomes_project 11 100668520 100678355 + MGP_LPJ_P0031941 Psmb3 protein_coding protein_coding MGP_LPJ_T0031942.1 MGP_LPJ_G0018941.1 mouse_genomes_project 11 100668555 100673186 + Psmb3 protein_coding retained_intron MGP_LPJ_T0031943.1 MGP_LPJ_G0018941.1 mouse_genomes_project 11 100676930 100678355 + Psmb3 protein_coding retained_intron MGP_LPJ_T0027970.1 MGP_LPJ_G0017949.1 mouse_genomes_project 11 6319315 6341495 + MGP_LPJ_P0027970 Gm11992 protein_coding protein_coding MGP_LPJ_T0009697.1 MGP_LPJ_G0007815.1 mouse_genomes_project 11 59352617 59352755 - Gm44313 miRNA miRNA MGP_LPJ_T0017108.1 MGP_LPJ_G0015070.1 mouse_genomes_project 11 19121784 19125654 + Gm12043 processed_transcript processed_transcript MGP_LPJ_T0032793.1 MGP_LPJ_G0019162.1 mouse_genomes_project 11 106786943 106839326 - MGP_LPJ_P0032793 Map3k14 protein_coding protein_coding MGP_LPJ_T0032794.1 MGP_LPJ_G0019162.1 mouse_genomes_project 11 106787986 106789029 - Map3k14 protein_coding processed_transcript MGP_LPJ_T0032795.1 MGP_LPJ_G0019162.1 mouse_genomes_project 11 106808977 106814227 - Map3k14 protein_coding processed_transcript MGP_LPJ_T0032796.1 MGP_LPJ_G0019162.1 mouse_genomes_project 11 106811281 106812082 - Map3k14 protein_coding processed_transcript MGP_LPJ_T0012467.1 MGP_LPJ_G0010558.1 mouse_genomes_project 11 3930825 3931403 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017120.1 MGP_LPJ_G0015079.1 mouse_genomes_project 11 40603690 40876079 + processed_transcript processed_transcript MGP_LPJ_T0017121.1 MGP_LPJ_G0015079.1 mouse_genomes_project 11 40788251 40880495 + processed_transcript processed_transcript MGP_LPJ_T0017122.1 MGP_LPJ_G0015079.1 mouse_genomes_project 11 40870252 40878489 + processed_transcript processed_transcript MGP_LPJ_T0006403.1 MGP_LPJ_G0005336.1 mouse_genomes_project 11 125415726 125417083 + Gm17586 lincRNA lincRNA MGP_LPJ_T0031392.1 MGP_LPJ_G0018804.1 mouse_genomes_project 11 89208166 89309355 + MGP_LPJ_P0031392 Trim37 protein_coding protein_coding MGP_LPJ_T0031393.1 MGP_LPJ_G0018804.1 mouse_genomes_project 11 89208394 89232012 + MGP_LPJ_P0031393 Trim37 protein_coding protein_coding MGP_LPJ_T0031394.1 MGP_LPJ_G0018804.1 mouse_genomes_project 11 89269646 89294465 + Trim37 protein_coding retained_intron MGP_LPJ_T0031395.1 MGP_LPJ_G0018804.1 mouse_genomes_project 11 89274401 89306930 + MGP_LPJ_P0031395 Trim37 protein_coding protein_coding MGP_LPJ_T0006405.1 MGP_LPJ_G0005338.1 mouse_genomes_project 11 126644412 126651627 + Gm12589 lincRNA lincRNA MGP_LPJ_T0029614.1 MGP_LPJ_G0018374.1 mouse_genomes_project 11 63573611 63616706 + MGP_LPJ_P0029614 Cdrt4 protein_coding protein_coding MGP_LPJ_T0032244.1 MGP_LPJ_G0019054.1 mouse_genomes_project 11 103710793 103717189 - MGP_LPJ_P0032244 P3h4 protein_coding protein_coding MGP_LPJ_T0032245.1 MGP_LPJ_G0019054.1 mouse_genomes_project 11 103711703 103714227 - MGP_LPJ_P0032245 P3h4 protein_coding protein_coding MGP_LPJ_T0006340.1 MGP_LPJ_G0005288.1 mouse_genomes_project 11 97981299 97983659 - Gm11515 lincRNA lincRNA MGP_LPJ_T0011810.1 MGP_LPJ_G0009926.1 mouse_genomes_project 11 74650559 74651493 - MGP_LPJ_P0011810 Olfr379-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_LPJ_T0030188.1 MGP_LPJ_G0018505.1 mouse_genomes_project 11 71630012 71631553 + MGP_LPJ_P0030188 Gltpd2 protein_coding protein_coding MGP_LPJ_T0030189.1 MGP_LPJ_G0018505.1 mouse_genomes_project 11 71630455 71631336 + MGP_LPJ_P0030189 Gltpd2 protein_coding protein_coding MGP_LPJ_T0029407.1 MGP_LPJ_G0018337.1 mouse_genomes_project 11 61364120 61378646 - MGP_LPJ_P0029407 Tmem11 protein_coding protein_coding MGP_LPJ_T0029408.1 MGP_LPJ_G0018337.1 mouse_genomes_project 11 61364120 61378880 - MGP_LPJ_P0029408 Tmem11 protein_coding protein_coding MGP_LPJ_T0029409.1 MGP_LPJ_G0018337.1 mouse_genomes_project 11 61364658 61378395 - MGP_LPJ_P0029409 Tmem11 protein_coding protein_coding MGP_LPJ_T0030814.1 MGP_LPJ_G0018659.1 mouse_genomes_project 11 79284505 79286800 - MGP_LPJ_P0030814 Gm10277 protein_coding protein_coding MGP_LPJ_T0011325.1 MGP_LPJ_G0009443.1 mouse_genomes_project 11 91427995 91428257 - Gm24734 misc_RNA misc_RNA MGP_LPJ_T0029008.1 MGP_LPJ_G0018221.1 mouse_genomes_project 11 54013487 54027280 + MGP_LPJ_P0029008 P4ha2 protein_coding protein_coding MGP_LPJ_T0029009.1 MGP_LPJ_G0018221.1 mouse_genomes_project 11 54014316 54044752 + MGP_LPJ_P0029009 P4ha2 protein_coding protein_coding MGP_LPJ_T0029010.1 MGP_LPJ_G0018221.1 mouse_genomes_project 11 54014355 54040862 + P4ha2 protein_coding retained_intron MGP_LPJ_T0029011.1 MGP_LPJ_G0018221.1 mouse_genomes_project 11 54014355 54044752 + MGP_LPJ_P0029011 P4ha2 protein_coding protein_coding MGP_LPJ_T0029012.1 MGP_LPJ_G0018221.1 mouse_genomes_project 11 54014367 54024731 + P4ha2 protein_coding retained_intron MGP_LPJ_T0029013.1 MGP_LPJ_G0018221.1 mouse_genomes_project 11 54014367 54044762 + MGP_LPJ_P0029013 P4ha2 protein_coding protein_coding MGP_LPJ_T0029014.1 MGP_LPJ_G0018221.1 mouse_genomes_project 11 54014372 54023410 + MGP_LPJ_P0029014 P4ha2 protein_coding protein_coding MGP_LPJ_T0029015.1 MGP_LPJ_G0018221.1 mouse_genomes_project 11 54014383 54024659 + MGP_LPJ_P0029015 P4ha2 protein_coding protein_coding MGP_LPJ_T0029016.1 MGP_LPJ_G0018221.1 mouse_genomes_project 11 54014460 54024670 + MGP_LPJ_P0029016 P4ha2 protein_coding nonsense_mediated_decay MGP_LPJ_T0029017.1 MGP_LPJ_G0018221.1 mouse_genomes_project 11 54014637 54024670 + MGP_LPJ_P0029017 P4ha2 protein_coding protein_coding MGP_LPJ_T0029018.1 MGP_LPJ_G0018221.1 mouse_genomes_project 11 54020415 54027370 + MGP_LPJ_P0029018 P4ha2 protein_coding protein_coding MGP_LPJ_T0029019.1 MGP_LPJ_G0018221.1 mouse_genomes_project 11 54024116 54033342 + MGP_LPJ_P0029019 P4ha2 protein_coding nonsense_mediated_decay MGP_LPJ_T0029020.1 MGP_LPJ_G0018221.1 mouse_genomes_project 11 54026298 54027370 + P4ha2 protein_coding processed_transcript MGP_LPJ_T0029021.1 MGP_LPJ_G0018221.1 mouse_genomes_project 11 54037772 54039162 + P4ha2 protein_coding retained_intron MGP_LPJ_T0029022.1 MGP_LPJ_G0018221.1 mouse_genomes_project 11 54040792 54044765 + P4ha2 protein_coding retained_intron MGP_LPJ_T0017173.1 MGP_LPJ_G0015107.1 mouse_genomes_project 11 96735150 96759696 + B230206L02Rik processed_transcript processed_transcript MGP_LPJ_T0017174.1 MGP_LPJ_G0015107.1 mouse_genomes_project 11 96735167 96759696 + B230206L02Rik processed_transcript processed_transcript MGP_LPJ_T0017175.1 MGP_LPJ_G0015107.1 mouse_genomes_project 11 96737325 96740511 + B230206L02Rik processed_transcript processed_transcript MGP_LPJ_T0030162.1 MGP_LPJ_G0018499.1 mouse_genomes_project 11 71536540 71539903 + Arrb2 protein_coding retained_intron MGP_LPJ_T0030163.1 MGP_LPJ_G0018499.1 mouse_genomes_project 11 71536542 71544581 + MGP_LPJ_P0030163 Arrb2 protein_coding protein_coding MGP_LPJ_T0030164.1 MGP_LPJ_G0018499.1 mouse_genomes_project 11 71536542 71544581 + MGP_LPJ_P0030164 Arrb2 protein_coding protein_coding MGP_LPJ_T0030165.1 MGP_LPJ_G0018499.1 mouse_genomes_project 11 71536550 71544735 + MGP_LPJ_P0030165 Arrb2 protein_coding protein_coding MGP_LPJ_T0030166.1 MGP_LPJ_G0018499.1 mouse_genomes_project 11 71536582 71541512 + MGP_LPJ_P0030166 Arrb2 protein_coding protein_coding MGP_LPJ_T0030167.1 MGP_LPJ_G0018499.1 mouse_genomes_project 11 71536587 71542654 + MGP_LPJ_P0030167 Arrb2 protein_coding nonsense_mediated_decay MGP_LPJ_T0030168.1 MGP_LPJ_G0018499.1 mouse_genomes_project 11 71536636 71544590 + MGP_LPJ_P0030168 Arrb2 protein_coding protein_coding MGP_LPJ_T0030169.1 MGP_LPJ_G0018499.1 mouse_genomes_project 11 71540605 71544140 + Arrb2 protein_coding retained_intron MGP_LPJ_T0030170.1 MGP_LPJ_G0018499.1 mouse_genomes_project 11 71540809 71542629 + Arrb2 protein_coding retained_intron MGP_LPJ_T0030171.1 MGP_LPJ_G0018499.1 mouse_genomes_project 11 71541198 71543460 + Arrb2 protein_coding retained_intron MGP_LPJ_T0030172.1 MGP_LPJ_G0018499.1 mouse_genomes_project 11 71542488 71544135 + Arrb2 protein_coding retained_intron MGP_LPJ_T0029587.1 MGP_LPJ_G0018368.1 mouse_genomes_project 11 63309818 63342549 - MGP_LPJ_P0029587 Zfp287 protein_coding protein_coding MGP_LPJ_T0029588.1 MGP_LPJ_G0018368.1 mouse_genomes_project 11 63323331 63342503 - MGP_LPJ_P0029588 Zfp287 protein_coding protein_coding MGP_LPJ_T0029589.1 MGP_LPJ_G0018368.1 mouse_genomes_project 11 63332281 63339335 - MGP_LPJ_P0029589 Zfp287 protein_coding protein_coding MGP_LPJ_T0029590.1 MGP_LPJ_G0018368.1 mouse_genomes_project 11 63337385 63342569 - Zfp287 protein_coding retained_intron MGP_LPJ_T0017197.1 MGP_LPJ_G0015123.1 mouse_genomes_project 11 106836716 106839599 - 1700028N14Rik processed_transcript processed_transcript MGP_LPJ_T0003165.1 MGP_LPJ_G0002938.1 mouse_genomes_project 11 42233229 42236663 - Gm12144 antisense antisense MGP_LPJ_T0028054.1 MGP_LPJ_G0017968.1 mouse_genomes_project 11 14757211 14765332 - MGP_LPJ_P0028054 Pno1 protein_coding protein_coding MGP_LPJ_T0028055.1 MGP_LPJ_G0017968.1 mouse_genomes_project 11 14762612 14764823 - Pno1 protein_coding processed_transcript MGP_LPJ_T0003181.1 MGP_LPJ_G0002953.1 mouse_genomes_project 11 52003996 52014121 + A630014C17Rik antisense antisense MGP_LPJ_T0098896.1 MGP_LPJ_G0037159.1 mouse_genomes_project 11 33504026 33504133 + Gm25799 snRNA snRNA MGP_LPJ_T0003198.1 MGP_LPJ_G0002968.1 mouse_genomes_project 11 59263756 59265595 + Gm12256 antisense antisense MGP_LPJ_T0028468.1 MGP_LPJ_G0018068.1 mouse_genomes_project 11 34459789 34617447 - MGP_LPJ_P0028468 Wwc1 protein_coding protein_coding MGP_LPJ_T0028469.1 MGP_LPJ_G0018068.1 mouse_genomes_project 11 34473556 34474920 - Wwc1 protein_coding processed_transcript MGP_LPJ_T0028470.1 MGP_LPJ_G0018068.1 mouse_genomes_project 11 34493509 34499485 - Wwc1 protein_coding processed_transcript MGP_LPJ_T0030173.1 MGP_LPJ_G0018500.1 mouse_genomes_project 11 71557002 71558813 + MGP_LPJ_P0030173 Med11 protein_coding protein_coding MGP_LPJ_T0030174.1 MGP_LPJ_G0018500.1 mouse_genomes_project 11 71557002 71558326 + MGP_LPJ_P0030174 Med11 protein_coding protein_coding MGP_LPJ_T0030175.1 MGP_LPJ_G0018500.1 mouse_genomes_project 11 71557015 71558650 + Med11 protein_coding retained_intron MGP_LPJ_T0028119.1 MGP_LPJ_G0017984.1 mouse_genomes_project 11 19362093 19463144 + MGP_LPJ_P0028119 Wdpcp protein_coding protein_coding MGP_LPJ_T0028120.1 MGP_LPJ_G0017984.1 mouse_genomes_project 11 19362093 19702874 + MGP_LPJ_P0028120 Wdpcp protein_coding protein_coding MGP_LPJ_T0028121.1 MGP_LPJ_G0017984.1 mouse_genomes_project 11 19362163 19500813 + Wdpcp protein_coding processed_transcript MGP_LPJ_T0028122.1 MGP_LPJ_G0017984.1 mouse_genomes_project 11 19492825 19516541 + Wdpcp protein_coding processed_transcript MGP_LPJ_T0028123.1 MGP_LPJ_G0017984.1 mouse_genomes_project 11 19498373 19553813 + Wdpcp protein_coding processed_transcript MGP_LPJ_T0028124.1 MGP_LPJ_G0017984.1 mouse_genomes_project 11 19618727 19622539 + Wdpcp protein_coding processed_transcript MGP_LPJ_T0009730.1 MGP_LPJ_G0007848.1 mouse_genomes_project 11 78551632 78551741 - Mir423 miRNA miRNA MGP_LPJ_T0027995.1 MGP_LPJ_G0017956.1 mouse_genomes_project 11 9185204 9208138 - Fignl1 protein_coding processed_transcript MGP_LPJ_T0027996.1 MGP_LPJ_G0017956.1 mouse_genomes_project 11 9185216 9200652 - Fignl1 protein_coding processed_transcript MGP_LPJ_T0027997.1 MGP_LPJ_G0017956.1 mouse_genomes_project 11 9199478 9208175 - MGP_LPJ_P0027997 Fignl1 protein_coding protein_coding MGP_LPJ_T0027998.1 MGP_LPJ_G0017956.1 mouse_genomes_project 11 9199478 9208175 - MGP_LPJ_P0027998 Fignl1 protein_coding protein_coding MGP_LPJ_T0027999.1 MGP_LPJ_G0017956.1 mouse_genomes_project 11 9199478 9208172 - MGP_LPJ_P0027999 Fignl1 protein_coding protein_coding MGP_LPJ_T0028000.1 MGP_LPJ_G0017956.1 mouse_genomes_project 11 9199742 9208145 - MGP_LPJ_P0028000 Fignl1 protein_coding protein_coding MGP_LPJ_T0028001.1 MGP_LPJ_G0017956.1 mouse_genomes_project 11 9201887 9208161 - MGP_LPJ_P0028001 Fignl1 protein_coding protein_coding MGP_LPJ_T0012616.1 MGP_LPJ_G0010707.1 mouse_genomes_project 11 58647137 58647356 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012576.1 MGP_LPJ_G0010667.1 mouse_genomes_project 11 45745474 45746051 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017166.1 MGP_LPJ_G0015104.1 mouse_genomes_project 11 85474257 85525227 + E230016K23Rik processed_transcript processed_transcript MGP_LPJ_T0017167.1 MGP_LPJ_G0015104.1 mouse_genomes_project 11 85474285 85495382 + E230016K23Rik processed_transcript processed_transcript MGP_LPJ_T0017168.1 MGP_LPJ_G0015104.1 mouse_genomes_project 11 85523195 85524437 + E230016K23Rik processed_transcript processed_transcript MGP_LPJ_T0012671.1 MGP_LPJ_G0010762.1 mouse_genomes_project 11 78628536 78629434 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098950.1 MGP_LPJ_G0037213.1 mouse_genomes_project 11 108759167 108759272 + Gm25362 snRNA snRNA MGP_LPJ_T0031019.1 MGP_LPJ_G0018705.1 mouse_genomes_project 11 81562702 81595801 - MGP_LPJ_P0031019 Utp6 protein_coding protein_coding MGP_LPJ_T0031020.1 MGP_LPJ_G0018705.1 mouse_genomes_project 11 81564334 81595812 - MGP_LPJ_P0031020 Utp6 protein_coding protein_coding MGP_LPJ_T0031021.1 MGP_LPJ_G0018705.1 mouse_genomes_project 11 81566231 81575684 - Utp6 protein_coding retained_intron MGP_LPJ_T0031022.1 MGP_LPJ_G0018705.1 mouse_genomes_project 11 81592018 81595789 - Utp6 protein_coding retained_intron MGP_LPJ_T0029906.1 MGP_LPJ_G0018447.1 mouse_genomes_project 11 70653004 70675867 + MGP_LPJ_P0029906 Fxr2 protein_coding protein_coding MGP_LPJ_T0029907.1 MGP_LPJ_G0018447.1 mouse_genomes_project 11 70662687 70663946 + Fxr2 protein_coding processed_transcript MGP_LPJ_T0029908.1 MGP_LPJ_G0018447.1 mouse_genomes_project 11 70666081 70672376 + Fxr2 protein_coding processed_transcript MGP_LPJ_T0029909.1 MGP_LPJ_G0018447.1 mouse_genomes_project 11 70672179 70673656 + Fxr2 protein_coding processed_transcript MGP_LPJ_T0029910.1 MGP_LPJ_G0018447.1 mouse_genomes_project 11 70673703 70674297 + Fxr2 protein_coding processed_transcript MGP_LPJ_T0029911.1 MGP_LPJ_G0018447.1 mouse_genomes_project 11 70674889 70675493 + Fxr2 protein_coding processed_transcript MGP_LPJ_T0032027.1 MGP_LPJ_G0018960.1 mouse_genomes_project 11 101402698 101403841 + MGP_LPJ_P0032027 Tcap protein_coding protein_coding MGP_LPJ_T0030137.1 MGP_LPJ_G0018492.1 mouse_genomes_project 11 71325443 71330065 - MGP_LPJ_P0030137 Gm21988 protein_coding nonsense_mediated_decay MGP_LPJ_T0030142.1 MGP_LPJ_G0018492.1 mouse_genomes_project 11 71325487 71330038 - MGP_LPJ_P0030142 Gm21988 protein_coding nonsense_mediated_decay MGP_LPJ_T0032002.1 MGP_LPJ_G0018955.1 mouse_genomes_project 11 101143322 101191204 - MGP_LPJ_P0032002 Med1 protein_coding protein_coding MGP_LPJ_T0032003.1 MGP_LPJ_G0018955.1 mouse_genomes_project 11 101143325 101191381 - MGP_LPJ_P0032003 Med1 protein_coding protein_coding MGP_LPJ_T0032004.1 MGP_LPJ_G0018955.1 mouse_genomes_project 11 101144182 101154955 - Med1 protein_coding processed_transcript MGP_LPJ_T0032005.1 MGP_LPJ_G0018955.1 mouse_genomes_project 11 101148913 101152187 - Med1 protein_coding processed_transcript MGP_LPJ_T0032006.1 MGP_LPJ_G0018955.1 mouse_genomes_project 11 101160360 101176788 - Med1 protein_coding processed_transcript MGP_LPJ_T0032007.1 MGP_LPJ_G0018955.1 mouse_genomes_project 11 101160907 101191397 - Med1 protein_coding processed_transcript MGP_LPJ_T0028824.1 MGP_LPJ_G0018171.1 mouse_genomes_project 11 50625953 50626895 + MGP_LPJ_P0028824 Olfr54 protein_coding protein_coding MGP_LPJ_T0029220.1 MGP_LPJ_G0018295.1 mouse_genomes_project 11 59375699 59388836 + MGP_LPJ_P0029220 Trim11 protein_coding protein_coding MGP_LPJ_T0029221.1 MGP_LPJ_G0018295.1 mouse_genomes_project 11 59375721 59388839 + MGP_LPJ_P0029221 Trim11 protein_coding protein_coding MGP_LPJ_T0029222.1 MGP_LPJ_G0018295.1 mouse_genomes_project 11 59375722 59388838 + MGP_LPJ_P0029222 Trim11 protein_coding protein_coding MGP_LPJ_T0030224.1 MGP_LPJ_G0018512.1 mouse_genomes_project 11 71768028 71770891 - MGP_LPJ_P0030224 Slc25a11 protein_coding protein_coding MGP_LPJ_T0030225.1 MGP_LPJ_G0018512.1 mouse_genomes_project 11 71768527 71769743 - Slc25a11 protein_coding retained_intron MGP_LPJ_T0030226.1 MGP_LPJ_G0018512.1 mouse_genomes_project 11 71769063 71771312 - MGP_LPJ_P0030226 Slc25a11 protein_coding protein_coding MGP_LPJ_T0030227.1 MGP_LPJ_G0018512.1 mouse_genomes_project 11 71769741 71770811 - Slc25a11 protein_coding retained_intron MGP_LPJ_T0030228.1 MGP_LPJ_G0018512.1 mouse_genomes_project 11 71769747 71770732 - MGP_LPJ_P0030228 Slc25a11 protein_coding protein_coding MGP_LPJ_T0031151.1 MGP_LPJ_G0018739.1 mouse_genomes_project 11 84753415 84754237 + Slfn5 protein_coding processed_transcript MGP_LPJ_T0031152.1 MGP_LPJ_G0018739.1 mouse_genomes_project 11 84754161 84762059 + MGP_LPJ_P0031152 Slfn5 protein_coding protein_coding MGP_LPJ_T0031153.1 MGP_LPJ_G0018739.1 mouse_genomes_project 11 84754168 84765007 + MGP_LPJ_P0031153 Slfn5 protein_coding protein_coding MGP_LPJ_T0031154.1 MGP_LPJ_G0018739.1 mouse_genomes_project 11 84756715 84763953 + MGP_LPJ_P0031154 Slfn5 protein_coding protein_coding MGP_LPJ_T0101483.1 MGP_LPJ_G0039627.1 mouse_genomes_project 11 74614430 74664636 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0027623.1 MGP_LPJ_G0017868.1 mouse_genomes_project 11 458295 464186 + MGP_LPJ_P0027623 Pla2g3 protein_coding protein_coding MGP_LPJ_T0027624.1 MGP_LPJ_G0017868.1 mouse_genomes_project 11 458310 469168 + MGP_LPJ_P0027624 Pla2g3 protein_coding nonsense_mediated_decay MGP_LPJ_T0027625.1 MGP_LPJ_G0017868.1 mouse_genomes_project 11 459001 464183 + Pla2g3 protein_coding retained_intron MGP_LPJ_T0011809.1 MGP_LPJ_G0009925.1 mouse_genomes_project 11 74592536 74596666 - MGP_LPJ_P0011809 Olfr377-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_LPJ_T0028614.1 MGP_LPJ_G0018106.1 mouse_genomes_project 11 45755129 45774531 + MGP_LPJ_P0028614 BC053393 protein_coding protein_coding MGP_LPJ_T0028125.1 MGP_LPJ_G0017985.1 mouse_genomes_project 11 19795896 19802727 - MGP_LPJ_P0028125 Otx1 protein_coding protein_coding MGP_LPJ_T0028126.1 MGP_LPJ_G0017985.1 mouse_genomes_project 11 19795901 19802822 - Otx1 protein_coding retained_intron MGP_LPJ_T0028127.1 MGP_LPJ_G0017985.1 mouse_genomes_project 11 19797968 19804013 - MGP_LPJ_P0028127 Otx1 protein_coding protein_coding MGP_LPJ_T0003298.1 MGP_LPJ_G0003046.1 mouse_genomes_project 11 99635342 99636810 + Gm11537 antisense antisense MGP_LPJ_T0032203.1 MGP_LPJ_G0019037.1 mouse_genomes_project 11 103303252 103323462 - MGP_LPJ_P0032203 Krt34 protein_coding protein_coding MGP_LPJ_T0028340.1 MGP_LPJ_G0018031.1 mouse_genomes_project 11 29747802 29760847 - MGP_LPJ_P0028340 Stc2 protein_coding protein_coding MGP_LPJ_T0028341.1 MGP_LPJ_G0018031.1 mouse_genomes_project 11 29748483 29759876 - Stc2 protein_coding processed_transcript MGP_LPJ_T0028342.1 MGP_LPJ_G0018031.1 mouse_genomes_project 11 29756223 29758939 - Stc2 protein_coding processed_transcript MGP_LPJ_T0028343.1 MGP_LPJ_G0018031.1 mouse_genomes_project 11 29758771 29760820 - Stc2 protein_coding processed_transcript MGP_LPJ_T0028344.1 MGP_LPJ_G0018031.1 mouse_genomes_project 11 29758775 29759829 - Stc2 protein_coding processed_transcript MGP_LPJ_T0009677.1 MGP_LPJ_G0007795.1 mouse_genomes_project 11 27010484 27010592 + Mir217 miRNA miRNA MGP_LPJ_T0029113.1 MGP_LPJ_G0018245.1 mouse_genomes_project 11 57088232 57429872 + MGP_LPJ_P0029113 Gria1 protein_coding protein_coding MGP_LPJ_T0029114.1 MGP_LPJ_G0018245.1 mouse_genomes_project 11 57088378 57429871 + MGP_LPJ_P0029114 Gria1 protein_coding protein_coding MGP_LPJ_T0029115.1 MGP_LPJ_G0018245.1 mouse_genomes_project 11 57088456 57427254 + MGP_LPJ_P0029115 Gria1 protein_coding protein_coding MGP_LPJ_T0029116.1 MGP_LPJ_G0018245.1 mouse_genomes_project 11 57271263 57286047 + Gria1 protein_coding processed_transcript MGP_LPJ_T0031211.1 MGP_LPJ_G0018764.1 mouse_genomes_project 11 85669482 85701851 + MGP_LPJ_P0031211 Heatr6 protein_coding protein_coding MGP_LPJ_T0031212.1 MGP_LPJ_G0018764.1 mouse_genomes_project 11 85669500 85700124 + Heatr6 protein_coding processed_transcript MGP_LPJ_T0031213.1 MGP_LPJ_G0018764.1 mouse_genomes_project 11 85669509 85699825 + MGP_LPJ_P0031213 Heatr6 protein_coding unknown_likely_coding MGP_LPJ_T0031214.1 MGP_LPJ_G0018764.1 mouse_genomes_project 11 85669815 85672668 + Heatr6 protein_coding processed_transcript MGP_LPJ_T0031215.1 MGP_LPJ_G0018764.1 mouse_genomes_project 11 85677538 85682132 + Heatr6 protein_coding retained_intron MGP_LPJ_T0031216.1 MGP_LPJ_G0018764.1 mouse_genomes_project 11 85691174 85697020 + Heatr6 protein_coding processed_transcript MGP_LPJ_T0017198.1 MGP_LPJ_G0015124.1 mouse_genomes_project 11 107288094 107314871 + C130046K22Rik processed_transcript processed_transcript MGP_LPJ_T0017199.1 MGP_LPJ_G0015124.1 mouse_genomes_project 11 107288094 107295062 + C130046K22Rik processed_transcript processed_transcript MGP_LPJ_T0032787.1 MGP_LPJ_G0019160.1 mouse_genomes_project 11 106766472 106775734 - MGP_LPJ_P0032787 1700023F06Rik protein_coding protein_coding MGP_LPJ_T0032788.1 MGP_LPJ_G0019160.1 mouse_genomes_project 11 106766489 106770370 - MGP_LPJ_P0032788 1700023F06Rik protein_coding protein_coding MGP_LPJ_T0032789.1 MGP_LPJ_G0019160.1 mouse_genomes_project 11 106766944 106775708 - MGP_LPJ_P0032789 1700023F06Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0032790.1 MGP_LPJ_G0019160.1 mouse_genomes_project 11 106767853 106775709 - MGP_LPJ_P0032790 1700023F06Rik protein_coding protein_coding MGP_LPJ_T0032791.1 MGP_LPJ_G0019160.1 mouse_genomes_project 11 106768257 106775734 - 1700023F06Rik protein_coding retained_intron MGP_LPJ_T0029198.1 MGP_LPJ_G0018281.1 mouse_genomes_project 11 59034737 59036304 - MGP_LPJ_P0029198 protein_coding protein_coding MGP_LPJ_T0028649.1 MGP_LPJ_G0018116.1 mouse_genomes_project 11 48166860 48181065 - MGP_LPJ_P0028649 Gm5431 protein_coding protein_coding MGP_LPJ_T0028650.1 MGP_LPJ_G0018116.1 mouse_genomes_project 11 48167095 48168632 - MGP_LPJ_P0028650 Gm5431 protein_coding protein_coding MGP_LPJ_T0003375.1 MGP_LPJ_G0003111.1 mouse_genomes_project 11 124968005 124969917 - Gm11770 antisense antisense MGP_LPJ_T0006237.1 MGP_LPJ_G0005208.1 mouse_genomes_project 11 32741226 32742844 + Gm12121 lincRNA lincRNA MGP_LPJ_T0012502.1 MGP_LPJ_G0010593.1 mouse_genomes_project 11 17978905 17979226 - processed_pseudogene processed_pseudogene MGP_LPJ_T0031059.1 MGP_LPJ_G0018714.1 mouse_genomes_project 11 82040963 82063474 - MGP_LPJ_P0031059 5730455P16Rik protein_coding protein_coding MGP_LPJ_T0031060.1 MGP_LPJ_G0018714.1 mouse_genomes_project 11 82040964 82063493 - MGP_LPJ_P0031060 5730455P16Rik protein_coding protein_coding MGP_LPJ_T0031061.1 MGP_LPJ_G0018714.1 mouse_genomes_project 11 82044450 82048807 - 5730455P16Rik protein_coding retained_intron MGP_LPJ_T0031062.1 MGP_LPJ_G0018714.1 mouse_genomes_project 11 82051775 82063493 - MGP_LPJ_P0031062 5730455P16Rik protein_coding protein_coding MGP_LPJ_T0012648.1 MGP_LPJ_G0010739.1 mouse_genomes_project 11 71023332 71023824 + processed_pseudogene processed_pseudogene MGP_LPJ_T0033703.1 MGP_LPJ_G0019351.1 mouse_genomes_project 11 122369677 122383481 - MGP_LPJ_P0033703 Tmc6 protein_coding nonsense_mediated_decay MGP_LPJ_T0033704.1 MGP_LPJ_G0019351.1 mouse_genomes_project 11 122369677 122384472 - MGP_LPJ_P0033704 Tmc6 protein_coding protein_coding MGP_LPJ_T0033705.1 MGP_LPJ_G0019351.1 mouse_genomes_project 11 122369749 122372763 - Tmc6 protein_coding retained_intron MGP_LPJ_T0033706.1 MGP_LPJ_G0019351.1 mouse_genomes_project 11 122373763 122376910 - MGP_LPJ_P0033706 Tmc6 protein_coding nonsense_mediated_decay MGP_LPJ_T0033707.1 MGP_LPJ_G0019351.1 mouse_genomes_project 11 122379215 122384454 - MGP_LPJ_P0033707 Tmc6 protein_coding protein_coding MGP_LPJ_T0033708.1 MGP_LPJ_G0019351.1 mouse_genomes_project 11 122379575 122383483 - MGP_LPJ_P0033708 Tmc6 protein_coding protein_coding MGP_LPJ_T0033709.1 MGP_LPJ_G0019351.1 mouse_genomes_project 11 122382574 122384777 - MGP_LPJ_P0033709 Tmc6 protein_coding protein_coding MGP_LPJ_T0033710.1 MGP_LPJ_G0019351.1 mouse_genomes_project 11 122382770 122386031 - MGP_LPJ_P0033710 Tmc6 protein_coding protein_coding MGP_LPJ_T0033711.1 MGP_LPJ_G0019351.1 mouse_genomes_project 11 122383024 122384491 - MGP_LPJ_P0033711 Tmc6 protein_coding protein_coding MGP_LPJ_T0017124.1 MGP_LPJ_G0015081.1 mouse_genomes_project 11 48122351 48132164 - Gm16170 processed_transcript processed_transcript MGP_LPJ_T0031670.1 MGP_LPJ_G0018869.1 mouse_genomes_project 11 97303838 97310130 + MGP_LPJ_P0031670 Mrpl27 protein_coding protein_coding MGP_LPJ_T0031671.1 MGP_LPJ_G0018869.1 mouse_genomes_project 11 97303847 97309959 + Mrpl27 protein_coding processed_transcript MGP_LPJ_T0031672.1 MGP_LPJ_G0018869.1 mouse_genomes_project 11 97304082 97309662 + Mrpl27 protein_coding processed_transcript MGP_LPJ_T0031673.1 MGP_LPJ_G0018869.1 mouse_genomes_project 11 97304102 97309758 + Mrpl27 protein_coding processed_transcript MGP_LPJ_T0033776.1 MGP_LPJ_G0019369.1 mouse_genomes_project 11 123044825 123057742 - MGP_LPJ_P0033776 Cant1 protein_coding protein_coding MGP_LPJ_T0033777.1 MGP_LPJ_G0019369.1 mouse_genomes_project 11 123044825 123057708 - MGP_LPJ_P0033777 Cant1 protein_coding protein_coding MGP_LPJ_T0033778.1 MGP_LPJ_G0019369.1 mouse_genomes_project 11 123044826 123057679 - MGP_LPJ_P0033778 Cant1 protein_coding protein_coding MGP_LPJ_T0033779.1 MGP_LPJ_G0019369.1 mouse_genomes_project 11 123046179 123057708 - MGP_LPJ_P0033779 Cant1 protein_coding protein_coding MGP_LPJ_T0033780.1 MGP_LPJ_G0019369.1 mouse_genomes_project 11 123046179 123054337 - MGP_LPJ_P0033780 Cant1 protein_coding protein_coding MGP_LPJ_T0033781.1 MGP_LPJ_G0019369.1 mouse_genomes_project 11 123046179 123057679 - MGP_LPJ_P0033781 Cant1 protein_coding protein_coding MGP_LPJ_T0033249.1 MGP_LPJ_G0019264.1 mouse_genomes_project 11 119144284 119155399 + MGP_LPJ_P0033249 Gpr142 protein_coding protein_coding MGP_LPJ_T0033250.1 MGP_LPJ_G0019264.1 mouse_genomes_project 11 119144284 119155399 + MGP_LPJ_P0033250 Gpr142 protein_coding protein_coding MGP_LPJ_T0012508.1 MGP_LPJ_G0010599.1 mouse_genomes_project 11 18947915 18948452 - processed_pseudogene processed_pseudogene MGP_LPJ_T0032969.1 MGP_LPJ_G0019204.1 mouse_genomes_project 11 110010467 110022748 + MGP_LPJ_P0032969 Tcam1 protein_coding nonsense_mediated_decay MGP_LPJ_T0032970.1 MGP_LPJ_G0019204.1 mouse_genomes_project 11 110010543 110023360 + MGP_LPJ_P0032970 Tcam1 protein_coding protein_coding MGP_LPJ_T0003357.1 MGP_LPJ_G0003095.1 mouse_genomes_project 11 118469508 118472200 - antisense antisense MGP_LPJ_T0003358.1 MGP_LPJ_G0003095.1 mouse_genomes_project 11 118471395 118472097 - antisense antisense MGP_LPJ_T0003376.1 MGP_LPJ_G0003112.1 mouse_genomes_project 11 124987989 124988878 - Gm11772 antisense antisense MGP_LPJ_T0032014.1 MGP_LPJ_G0018957.1 mouse_genomes_project 11 101334483 101338707 - MGP_LPJ_P0032014 Neurod2 protein_coding protein_coding MGP_LPJ_T0032507.1 MGP_LPJ_G0019110.1 mouse_genomes_project 11 105060306 105064002 + Rdm1 protein_coding processed_transcript MGP_LPJ_T0032508.1 MGP_LPJ_G0019110.1 mouse_genomes_project 11 105061143 105069714 + MGP_LPJ_P0032508 Rdm1 protein_coding protein_coding MGP_LPJ_T0032509.1 MGP_LPJ_G0019110.1 mouse_genomes_project 11 105061173 105067492 + Rdm1 protein_coding processed_transcript MGP_LPJ_T0032510.1 MGP_LPJ_G0019110.1 mouse_genomes_project 11 105061591 105069686 + MGP_LPJ_P0032510 Rdm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0032511.1 MGP_LPJ_G0019110.1 mouse_genomes_project 11 105067396 105069574 + Rdm1 protein_coding retained_intron MGP_LPJ_T0030315.1 MGP_LPJ_G0018526.1 mouse_genomes_project 11 72140065 72164136 - MGP_LPJ_P0030315 Dhx33 protein_coding protein_coding MGP_LPJ_T0030316.1 MGP_LPJ_G0018526.1 mouse_genomes_project 11 72142485 72149950 - MGP_LPJ_P0030316 Dhx33 protein_coding nonsense_mediated_decay MGP_LPJ_T0030317.1 MGP_LPJ_G0018526.1 mouse_genomes_project 11 72142726 72164119 - MGP_LPJ_P0030317 Dhx33 protein_coding protein_coding MGP_LPJ_T0030318.1 MGP_LPJ_G0018526.1 mouse_genomes_project 11 72142726 72164039 - MGP_LPJ_P0030318 Dhx33 protein_coding nonsense_mediated_decay MGP_LPJ_T0030319.1 MGP_LPJ_G0018526.1 mouse_genomes_project 11 72147684 72151158 - Dhx33 protein_coding retained_intron MGP_LPJ_T0030320.1 MGP_LPJ_G0018526.1 mouse_genomes_project 11 72148094 72151963 - MGP_LPJ_P0030320 Dhx33 protein_coding nonsense_mediated_decay MGP_LPJ_T0030321.1 MGP_LPJ_G0018526.1 mouse_genomes_project 11 72149079 72149987 - Dhx33 protein_coding retained_intron MGP_LPJ_T0030322.1 MGP_LPJ_G0018526.1 mouse_genomes_project 11 72156017 72164136 - Dhx33 protein_coding retained_intron MGP_LPJ_T0098954.1 MGP_LPJ_G0037217.1 mouse_genomes_project 11 113006954 113007061 - Gm24149 snRNA snRNA MGP_LPJ_T0029825.1 MGP_LPJ_G0018427.1 mouse_genomes_project 11 70112710 70116330 + MGP_LPJ_P0029825 Hes7 protein_coding protein_coding MGP_LPJ_T0032298.1 MGP_LPJ_G0019065.1 mouse_genomes_project 11 104020947 104031422 - MGP_LPJ_P0032298 Dhx58 protein_coding protein_coding MGP_LPJ_T0032299.1 MGP_LPJ_G0019065.1 mouse_genomes_project 11 104021126 104022684 - Dhx58 protein_coding processed_transcript MGP_LPJ_T0032300.1 MGP_LPJ_G0019065.1 mouse_genomes_project 11 104021316 104026386 - Dhx58 protein_coding processed_transcript MGP_LPJ_T0032301.1 MGP_LPJ_G0019065.1 mouse_genomes_project 11 104028542 104031404 - Dhx58 protein_coding processed_transcript MGP_LPJ_T0032302.1 MGP_LPJ_G0019065.1 mouse_genomes_project 11 104029298 104030498 - Dhx58 protein_coding processed_transcript MGP_LPJ_T0032303.1 MGP_LPJ_G0019065.1 mouse_genomes_project 11 104029910 104031422 - Dhx58 protein_coding processed_transcript MGP_LPJ_T0098888.1 MGP_LPJ_G0037151.1 mouse_genomes_project 11 16332443 16332545 + Gm23093 snRNA snRNA MGP_LPJ_T0029211.1 MGP_LPJ_G0018289.1 mouse_genomes_project 11 59262206 59281326 - MGP_LPJ_P0029211 Zfp39 protein_coding protein_coding MGP_LPJ_T0028799.1 MGP_LPJ_G0018162.1 mouse_genomes_project 11 50415238 50416992 + Grm6 protein_coding processed_transcript MGP_LPJ_T0028800.1 MGP_LPJ_G0018162.1 mouse_genomes_project 11 50415238 50433142 + MGP_LPJ_P0028800 Grm6 protein_coding protein_coding MGP_LPJ_T0028801.1 MGP_LPJ_G0018162.1 mouse_genomes_project 11 50415539 50433113 + MGP_LPJ_P0028801 Grm6 protein_coding protein_coding MGP_LPJ_T0028802.1 MGP_LPJ_G0018162.1 mouse_genomes_project 11 50422565 50433144 + Grm6 protein_coding processed_transcript MGP_LPJ_T0030850.1 MGP_LPJ_G0018663.1 mouse_genomes_project 11 79538475 79544062 + MGP_LPJ_P0030850 Dhrs13 protein_coding protein_coding MGP_LPJ_T0030851.1 MGP_LPJ_G0018663.1 mouse_genomes_project 11 79538544 79543987 + MGP_LPJ_P0030851 Dhrs13 protein_coding nonsense_mediated_decay MGP_LPJ_T0030852.1 MGP_LPJ_G0018663.1 mouse_genomes_project 11 79538547 79544060 + MGP_LPJ_P0030852 Dhrs13 protein_coding protein_coding MGP_LPJ_T0030853.1 MGP_LPJ_G0018663.1 mouse_genomes_project 11 79538554 79539673 + MGP_LPJ_P0030853 Dhrs13 protein_coding protein_coding MGP_LPJ_T0027968.1 MGP_LPJ_G0017948.1 mouse_genomes_project 11 6286392 6311326 - MGP_LPJ_P0027968 Sun3 protein_coding protein_coding MGP_LPJ_T0027969.1 MGP_LPJ_G0017948.1 mouse_genomes_project 11 6286392 6319713 - MGP_LPJ_P0027969 Sun3 protein_coding protein_coding MGP_LPJ_T0033932.1 MGP_LPJ_G0019397.1 mouse_genomes_project 11 124985861 125050733 + MGP_LPJ_P0033932 Bahcc1 protein_coding protein_coding MGP_LPJ_T0033933.1 MGP_LPJ_G0019397.1 mouse_genomes_project 11 124985861 125050719 + MGP_LPJ_P0033933 Bahcc1 protein_coding protein_coding MGP_LPJ_T0033934.1 MGP_LPJ_G0019397.1 mouse_genomes_project 11 124989200 124990040 + Bahcc1 protein_coding processed_transcript MGP_LPJ_T0033935.1 MGP_LPJ_G0019397.1 mouse_genomes_project 11 124989454 125050719 + MGP_LPJ_P0033935 Bahcc1 protein_coding protein_coding MGP_LPJ_T0029368.1 MGP_LPJ_G0018328.1 mouse_genomes_project 11 60956057 61018343 + MGP_LPJ_P0029368 Myo15 protein_coding protein_coding MGP_LPJ_T0029369.1 MGP_LPJ_G0018328.1 mouse_genomes_project 11 60956057 61018343 + MGP_LPJ_P0029369 Myo15 protein_coding protein_coding MGP_LPJ_T0029370.1 MGP_LPJ_G0018328.1 mouse_genomes_project 11 60956057 61018343 + MGP_LPJ_P0029370 Myo15 protein_coding protein_coding MGP_LPJ_T0029371.1 MGP_LPJ_G0018328.1 mouse_genomes_project 11 60967859 60999648 + MGP_LPJ_P0029371 Myo15 protein_coding protein_coding MGP_LPJ_T0029372.1 MGP_LPJ_G0018328.1 mouse_genomes_project 11 60999469 61011909 + Myo15 protein_coding retained_intron MGP_LPJ_T0006389.1 MGP_LPJ_G0005324.1 mouse_genomes_project 11 121593064 121594898 + Gm11731 lincRNA lincRNA MGP_LPJ_T0012689.1 MGP_LPJ_G0010780.1 mouse_genomes_project 11 84517630 84518733 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101787.1 MGP_LPJ_G0039825.1 mouse_genomes_project 11 97443295 97591745 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0031565.1 MGP_LPJ_G0018848.1 mouse_genomes_project 11 96435029 96462235 - Utp18 protein_coding processed_transcript MGP_LPJ_T0031566.1 MGP_LPJ_G0018848.1 mouse_genomes_project 11 96435029 96462235 - MGP_LPJ_P0031566 Utp18 protein_coding protein_coding MGP_LPJ_T0031567.1 MGP_LPJ_G0018848.1 mouse_genomes_project 11 96451198 96451959 - Utp18 protein_coding processed_transcript MGP_LPJ_T0029199.1 MGP_LPJ_G0018282.1 mouse_genomes_project 11 59081746 59086596 + MGP_LPJ_P0029199 Olfr315 protein_coding protein_coding MGP_LPJ_T0029200.1 MGP_LPJ_G0018282.1 mouse_genomes_project 11 59086177 59087174 + MGP_LPJ_P0029200 Olfr315 protein_coding protein_coding MGP_LPJ_T0028241.1 MGP_LPJ_G0018011.1 mouse_genomes_project 11 26607893 26819426 - MGP_LPJ_P0028241 Ccdc85a protein_coding protein_coding MGP_LPJ_T0028242.1 MGP_LPJ_G0018011.1 mouse_genomes_project 11 26607902 26819426 - MGP_LPJ_P0028242 Ccdc85a protein_coding protein_coding MGP_LPJ_T0028243.1 MGP_LPJ_G0018011.1 mouse_genomes_project 11 26607902 26819454 - MGP_LPJ_P0028243 Ccdc85a protein_coding protein_coding MGP_LPJ_T0028244.1 MGP_LPJ_G0018011.1 mouse_genomes_project 11 26609362 26819125 - MGP_LPJ_P0028244 Ccdc85a protein_coding protein_coding MGP_LPJ_T0028245.1 MGP_LPJ_G0018011.1 mouse_genomes_project 11 26611054 26813300 - MGP_LPJ_P0028245 Ccdc85a protein_coding protein_coding MGP_LPJ_T0028246.1 MGP_LPJ_G0018011.1 mouse_genomes_project 11 26812072 26819396 - Ccdc85a protein_coding retained_intron MGP_LPJ_T0032171.1 MGP_LPJ_G0019005.1 mouse_genomes_project 11 102727394 102728435 - MGP_LPJ_P0032171 Krtap1-5 protein_coding protein_coding MGP_LPJ_T0012752.1 MGP_LPJ_G0010843.1 mouse_genomes_project 11 110806747 110807579 - processed_pseudogene processed_pseudogene MGP_LPJ_T0032976.1 MGP_LPJ_G0019208.1 mouse_genomes_project 11 110102107 110111609 + MGP_LPJ_P0032976 Prr29 protein_coding protein_coding MGP_LPJ_T0032977.1 MGP_LPJ_G0019208.1 mouse_genomes_project 11 110109339 110112053 + MGP_LPJ_P0032977 Prr29 protein_coding protein_coding MGP_LPJ_T0032978.1 MGP_LPJ_G0019208.1 mouse_genomes_project 11 110109339 110111843 + MGP_LPJ_P0032978 Prr29 protein_coding protein_coding MGP_LPJ_T0032979.1 MGP_LPJ_G0019208.1 mouse_genomes_project 11 110109352 110111416 + MGP_LPJ_P0032979 Prr29 protein_coding protein_coding MGP_LPJ_T0028542.1 MGP_LPJ_G0018085.1 mouse_genomes_project 11 42616628 42622087 - MGP_LPJ_P0028542 Fabp6 protein_coding protein_coding MGP_LPJ_T0098937.1 MGP_LPJ_G0037200.1 mouse_genomes_project 11 91378851 91378955 - Gm22534 snRNA snRNA MGP_LPJ_T0032314.1 MGP_LPJ_G0019069.1 mouse_genomes_project 11 104071552 104090951 - MGP_LPJ_P0032314 Kcnh4 protein_coding protein_coding MGP_LPJ_T0032315.1 MGP_LPJ_G0019069.1 mouse_genomes_project 11 104071558 104091153 - MGP_LPJ_P0032315 Kcnh4 protein_coding protein_coding MGP_LPJ_T0009734.1 MGP_LPJ_G0007852.1 mouse_genomes_project 11 79696196 79696257 + Mir7653 miRNA miRNA MGP_LPJ_T0027598.1 MGP_LPJ_G0017865.1 mouse_genomes_project 11 288817 301395 + MGP_LPJ_P0027598 Pik3ip1 protein_coding protein_coding MGP_LPJ_T0027599.1 MGP_LPJ_G0017865.1 mouse_genomes_project 11 289144 290522 + Pik3ip1 protein_coding retained_intron MGP_LPJ_T0027600.1 MGP_LPJ_G0017865.1 mouse_genomes_project 11 289203 300107 + MGP_LPJ_P0027600 Pik3ip1 protein_coding protein_coding MGP_LPJ_T0027601.1 MGP_LPJ_G0017865.1 mouse_genomes_project 11 289209 292381 + Pik3ip1 protein_coding retained_intron MGP_LPJ_T0027602.1 MGP_LPJ_G0017865.1 mouse_genomes_project 11 289224 292383 + MGP_LPJ_P0027602 Pik3ip1 protein_coding protein_coding MGP_LPJ_T0027603.1 MGP_LPJ_G0017865.1 mouse_genomes_project 11 290490 292098 + Pik3ip1 protein_coding retained_intron MGP_LPJ_T0027604.1 MGP_LPJ_G0017865.1 mouse_genomes_project 11 290527 300098 + MGP_LPJ_P0027604 Pik3ip1 protein_coding protein_coding MGP_LPJ_T0027605.1 MGP_LPJ_G0017865.1 mouse_genomes_project 11 290869 300116 + MGP_LPJ_P0027605 Pik3ip1 protein_coding protein_coding MGP_LPJ_T0027606.1 MGP_LPJ_G0017865.1 mouse_genomes_project 11 291390 292379 + Pik3ip1 protein_coding processed_transcript MGP_LPJ_T0027607.1 MGP_LPJ_G0017865.1 mouse_genomes_project 11 292792 300429 + Pik3ip1 protein_coding processed_transcript MGP_LPJ_T0029410.1 MGP_LPJ_G0018338.1 mouse_genomes_project 11 61406192 61418835 - MGP_LPJ_P0029410 Natd1 protein_coding protein_coding MGP_LPJ_T0029411.1 MGP_LPJ_G0018338.1 mouse_genomes_project 11 61409900 61419773 - Natd1 protein_coding processed_transcript MGP_LPJ_T0012770.1 MGP_LPJ_G0010861.1 mouse_genomes_project 11 120012526 120013063 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012610.1 MGP_LPJ_G0010701.1 mouse_genomes_project 11 57543688 57544426 + processed_pseudogene processed_pseudogene MGP_LPJ_T0033725.1 MGP_LPJ_G0019356.1 mouse_genomes_project 11 122422173 122433171 - MGP_LPJ_P0033725 Tk1 protein_coding protein_coding MGP_LPJ_T0033726.1 MGP_LPJ_G0019356.1 mouse_genomes_project 11 122422271 122423734 - Tk1 protein_coding retained_intron MGP_LPJ_T0033727.1 MGP_LPJ_G0019356.1 mouse_genomes_project 11 122422552 122424504 - Tk1 protein_coding retained_intron MGP_LPJ_T0033728.1 MGP_LPJ_G0019356.1 mouse_genomes_project 11 122428719 122432916 - Tk1 protein_coding retained_intron MGP_LPJ_T0033729.1 MGP_LPJ_G0019356.1 mouse_genomes_project 11 122428797 122432946 - Tk1 protein_coding retained_intron MGP_LPJ_T0033730.1 MGP_LPJ_G0019356.1 mouse_genomes_project 11 122429537 122432926 - Tk1 protein_coding retained_intron MGP_LPJ_T0033731.1 MGP_LPJ_G0019356.1 mouse_genomes_project 11 122431913 122432896 - Tk1 protein_coding retained_intron MGP_LPJ_T0006209.1 MGP_LPJ_G0005186.1 mouse_genomes_project 11 20554214 20558114 + Gm12056 lincRNA lincRNA MGP_LPJ_T0012718.1 MGP_LPJ_G0010809.1 mouse_genomes_project 11 99092776 99093333 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098941.1 MGP_LPJ_G0037204.1 mouse_genomes_project 11 98913925 98914109 - Gm22423 snRNA snRNA MGP_LPJ_T0006248.1 MGP_LPJ_G0005219.1 mouse_genomes_project 11 44208841 44223728 - Gm12159 lincRNA lincRNA MGP_LPJ_T0012647.1 MGP_LPJ_G0010738.1 mouse_genomes_project 11 70767913 70768503 - processed_pseudogene processed_pseudogene MGP_LPJ_T0031811.1 MGP_LPJ_G0018913.1 mouse_genomes_project 11 99214536 99217038 + MGP_LPJ_P0031811 Hoxb1 protein_coding protein_coding MGP_LPJ_T0031812.1 MGP_LPJ_G0018913.1 mouse_genomes_project 11 99215042 99216006 + Hoxb1 protein_coding processed_transcript MGP_LPJ_T0030893.1 MGP_LPJ_G0018672.1 mouse_genomes_project 11 79714524 79727645 + MGP_LPJ_P0030893 Proca1 protein_coding protein_coding MGP_LPJ_T0030894.1 MGP_LPJ_G0018672.1 mouse_genomes_project 11 79715836 79727608 + MGP_LPJ_P0030894 Proca1 protein_coding protein_coding MGP_LPJ_T0030895.1 MGP_LPJ_G0018672.1 mouse_genomes_project 11 79715866 79727904 + MGP_LPJ_P0030895 Proca1 protein_coding protein_coding MGP_LPJ_T0030896.1 MGP_LPJ_G0018672.1 mouse_genomes_project 11 79726567 79727232 + Proca1 protein_coding processed_transcript MGP_LPJ_T0100124.1 MGP_LPJ_G0038387.1 mouse_genomes_project 11 5265406 5265481 - Gm24051 snoRNA snoRNA MGP_LPJ_T0032902.1 MGP_LPJ_G0019187.1 mouse_genomes_project 11 109065389 109155444 - MGP_LPJ_P0032902 March10 protein_coding protein_coding MGP_LPJ_T0032903.1 MGP_LPJ_G0019187.1 mouse_genomes_project 11 109068332 109076131 - March10 protein_coding processed_transcript MGP_LPJ_T0032904.1 MGP_LPJ_G0019187.1 mouse_genomes_project 11 109101414 109115418 - MGP_LPJ_P0032904 March10 protein_coding protein_coding MGP_LPJ_T0032905.1 MGP_LPJ_G0019187.1 mouse_genomes_project 11 109106374 109157782 - MGP_LPJ_P0032905 March10 protein_coding protein_coding MGP_LPJ_T0006379.1 MGP_LPJ_G0005316.1 mouse_genomes_project 11 118376071 118379982 + 1700025D23Rik lincRNA lincRNA MGP_LPJ_T0029951.1 MGP_LPJ_G0018455.1 mouse_genomes_project 11 70713824 70723342 - MGP_LPJ_P0029951 Tnfsf12 protein_coding protein_coding MGP_LPJ_T0029952.1 MGP_LPJ_G0018455.1 mouse_genomes_project 11 70714914 70723014 - MGP_LPJ_P0029952 Tnfsf12 protein_coding protein_coding MGP_LPJ_T0028787.1 MGP_LPJ_G0018158.1 mouse_genomes_project 11 49908905 49983201 - MGP_LPJ_P0028787 Rufy1 protein_coding protein_coding MGP_LPJ_T0028788.1 MGP_LPJ_G0018158.1 mouse_genomes_project 11 49908992 49961910 - Rufy1 protein_coding processed_transcript MGP_LPJ_T0028789.1 MGP_LPJ_G0018158.1 mouse_genomes_project 11 49927520 49974067 - Rufy1 protein_coding processed_transcript MGP_LPJ_T0029626.1 MGP_LPJ_G0018381.1 mouse_genomes_project 11 65707304 65729605 + MGP_LPJ_P0029626 Elac2 protein_coding protein_coding MGP_LPJ_T0029627.1 MGP_LPJ_G0018381.1 mouse_genomes_project 11 65707337 65728864 + MGP_LPJ_P0029627 Elac2 protein_coding protein_coding MGP_LPJ_T0029628.1 MGP_LPJ_G0018381.1 mouse_genomes_project 11 65707338 65708908 + Elac2 protein_coding processed_transcript MGP_LPJ_T0029629.1 MGP_LPJ_G0018381.1 mouse_genomes_project 11 65707340 65729136 + MGP_LPJ_P0029629 Elac2 protein_coding protein_coding MGP_LPJ_T0029630.1 MGP_LPJ_G0018381.1 mouse_genomes_project 11 65707357 65729603 + Elac2 protein_coding processed_transcript MGP_LPJ_T0029631.1 MGP_LPJ_G0018381.1 mouse_genomes_project 11 65713721 65720737 + MGP_LPJ_P0029631 Elac2 protein_coding protein_coding MGP_LPJ_T0029632.1 MGP_LPJ_G0018381.1 mouse_genomes_project 11 65727871 65729424 + Elac2 protein_coding processed_transcript MGP_LPJ_T0027781.1 MGP_LPJ_G0017905.1 mouse_genomes_project 11 2153594 2155834 + MGP_LPJ_P0027781 Rasl10a protein_coding protein_coding MGP_LPJ_T0027782.1 MGP_LPJ_G0017905.1 mouse_genomes_project 11 2154406 2155511 + Rasl10a protein_coding processed_transcript MGP_LPJ_T0032815.1 MGP_LPJ_G0019168.1 mouse_genomes_project 11 107264464 107288269 - MGP_LPJ_P0032815 Gosr2 protein_coding protein_coding MGP_LPJ_T0032816.1 MGP_LPJ_G0019168.1 mouse_genomes_project 11 107267621 107288065 - MGP_LPJ_P0032816 Gosr2 protein_coding protein_coding MGP_LPJ_T0032817.1 MGP_LPJ_G0019168.1 mouse_genomes_project 11 107267828 107288069 - Gosr2 protein_coding processed_transcript MGP_LPJ_T0012478.1 MGP_LPJ_G0010569.1 mouse_genomes_project 11 10408182 10408900 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017082.1 MGP_LPJ_G0015061.1 mouse_genomes_project 11 415992 420692 + 8430429K09Rik processed_transcript processed_transcript MGP_LPJ_T0017083.1 MGP_LPJ_G0015061.1 mouse_genomes_project 11 416064 420556 + 8430429K09Rik processed_transcript processed_transcript MGP_LPJ_T0017084.1 MGP_LPJ_G0015061.1 mouse_genomes_project 11 416099 449880 + 8430429K09Rik processed_transcript processed_transcript MGP_LPJ_T0017085.1 MGP_LPJ_G0015061.1 mouse_genomes_project 11 416099 421931 + 8430429K09Rik processed_transcript processed_transcript MGP_LPJ_T0017086.1 MGP_LPJ_G0015061.1 mouse_genomes_project 11 416107 420609 + 8430429K09Rik processed_transcript processed_transcript MGP_LPJ_T0032650.1 MGP_LPJ_G0019135.1 mouse_genomes_project 11 105896876 105901381 - MGP_LPJ_P0032650 Slc25a39 protein_coding protein_coding MGP_LPJ_T0032651.1 MGP_LPJ_G0019135.1 mouse_genomes_project 11 105896876 105901436 - MGP_LPJ_P0032651 Slc25a39 protein_coding protein_coding MGP_LPJ_T0032652.1 MGP_LPJ_G0019135.1 mouse_genomes_project 11 105896933 105898385 - MGP_LPJ_P0032652 Slc25a39 protein_coding protein_coding MGP_LPJ_T0032653.1 MGP_LPJ_G0019135.1 mouse_genomes_project 11 105897036 105901398 - Slc25a39 protein_coding retained_intron MGP_LPJ_T0032654.1 MGP_LPJ_G0019135.1 mouse_genomes_project 11 105897682 105901400 - MGP_LPJ_P0032654 Slc25a39 protein_coding nonsense_mediated_decay MGP_LPJ_T0032655.1 MGP_LPJ_G0019135.1 mouse_genomes_project 11 105897909 105901348 - Slc25a39 protein_coding retained_intron MGP_LPJ_T0032656.1 MGP_LPJ_G0019135.1 mouse_genomes_project 11 105897923 105900708 - MGP_LPJ_P0032656 Slc25a39 protein_coding protein_coding MGP_LPJ_T0032657.1 MGP_LPJ_G0019135.1 mouse_genomes_project 11 105897953 105901379 - MGP_LPJ_P0032657 Slc25a39 protein_coding nonsense_mediated_decay MGP_LPJ_T0032658.1 MGP_LPJ_G0019135.1 mouse_genomes_project 11 105898280 105901355 - Slc25a39 protein_coding retained_intron MGP_LPJ_T0032659.1 MGP_LPJ_G0019135.1 mouse_genomes_project 11 105898375 105901207 - MGP_LPJ_P0032659 Slc25a39 protein_coding protein_coding MGP_LPJ_T0032660.1 MGP_LPJ_G0019135.1 mouse_genomes_project 11 105898500 105900847 - MGP_LPJ_P0032660 Slc25a39 protein_coding protein_coding MGP_LPJ_T0032661.1 MGP_LPJ_G0019135.1 mouse_genomes_project 11 105898678 105901275 - MGP_LPJ_P0032661 Slc25a39 protein_coding protein_coding MGP_LPJ_T0032662.1 MGP_LPJ_G0019135.1 mouse_genomes_project 11 105898745 105901838 - MGP_LPJ_P0032662 Slc25a39 protein_coding protein_coding MGP_LPJ_T0032663.1 MGP_LPJ_G0019135.1 mouse_genomes_project 11 105898914 105900700 - Slc25a39 protein_coding processed_transcript MGP_LPJ_T0032664.1 MGP_LPJ_G0019135.1 mouse_genomes_project 11 105899630 105900776 - Slc25a39 protein_coding retained_intron MGP_LPJ_T0028254.1 MGP_LPJ_G0018014.1 mouse_genomes_project 11 27418943 27470154 + MGP_LPJ_P0028254 Smek2 protein_coding protein_coding MGP_LPJ_T0028255.1 MGP_LPJ_G0018014.1 mouse_genomes_project 11 27418943 27458052 + MGP_LPJ_P0028255 Smek2 protein_coding protein_coding MGP_LPJ_T0028256.1 MGP_LPJ_G0018014.1 mouse_genomes_project 11 27420676 27436290 + MGP_LPJ_P0028256 Smek2 protein_coding protein_coding MGP_LPJ_T0028257.1 MGP_LPJ_G0018014.1 mouse_genomes_project 11 27445159 27449074 + Smek2 protein_coding processed_transcript MGP_LPJ_T0028258.1 MGP_LPJ_G0018014.1 mouse_genomes_project 11 27445170 27457179 + MGP_LPJ_P0028258 Smek2 protein_coding protein_coding MGP_LPJ_T0028259.1 MGP_LPJ_G0018014.1 mouse_genomes_project 11 27453484 27467908 + Smek2 protein_coding processed_transcript MGP_LPJ_T0028260.1 MGP_LPJ_G0018014.1 mouse_genomes_project 11 27462024 27470154 + MGP_LPJ_P0028260 Smek2 protein_coding nonsense_mediated_decay MGP_LPJ_T0031946.1 MGP_LPJ_G0018943.1 mouse_genomes_project 11 100712464 100718154 - Cwc25 protein_coding processed_transcript MGP_LPJ_T0031947.1 MGP_LPJ_G0018943.1 mouse_genomes_project 11 100712598 100735247 - MGP_LPJ_P0031947 Cwc25 protein_coding protein_coding MGP_LPJ_T0031948.1 MGP_LPJ_G0018943.1 mouse_genomes_project 11 100714651 100721327 - MGP_LPJ_P0031948 Cwc25 protein_coding protein_coding MGP_LPJ_T0031949.1 MGP_LPJ_G0018943.1 mouse_genomes_project 11 100724951 100735231 - MGP_LPJ_P0031949 Cwc25 protein_coding protein_coding MGP_LPJ_T0029592.1 MGP_LPJ_G0018370.1 mouse_genomes_project 11 63364796 63404158 - Zfp286 protein_coding processed_transcript MGP_LPJ_T0029593.1 MGP_LPJ_G0018370.1 mouse_genomes_project 11 63394868 63404698 - MGP_LPJ_P0029593 Zfp286 protein_coding protein_coding MGP_LPJ_T0029594.1 MGP_LPJ_G0018370.1 mouse_genomes_project 11 63395912 63404595 - Zfp286 protein_coding processed_transcript MGP_LPJ_T0029595.1 MGP_LPJ_G0018370.1 mouse_genomes_project 11 63395921 63399330 - Zfp286 protein_coding processed_transcript MGP_LPJ_T0029596.1 MGP_LPJ_G0018370.1 mouse_genomes_project 11 63398694 63404587 - Zfp286 protein_coding processed_transcript MGP_LPJ_T0029597.1 MGP_LPJ_G0018370.1 mouse_genomes_project 11 63398694 63404564 - Zfp286 protein_coding processed_transcript MGP_LPJ_T0029598.1 MGP_LPJ_G0018370.1 mouse_genomes_project 11 63402752 63404601 - Zfp286 protein_coding processed_transcript MGP_LPJ_T0012725.1 MGP_LPJ_G0010816.1 mouse_genomes_project 11 100953605 100954049 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012726.1 MGP_LPJ_G0010817.1 mouse_genomes_project 11 101050913 101051069 + processed_pseudogene processed_pseudogene MGP_LPJ_T0027911.1 MGP_LPJ_G0017933.1 mouse_genomes_project 11 3617537 3634558 - MGP_LPJ_P0027911 H2afv protein_coding protein_coding MGP_LPJ_T0027912.1 MGP_LPJ_G0017933.1 mouse_genomes_project 11 3618446 3634467 - MGP_LPJ_P0027912 H2afv protein_coding protein_coding MGP_LPJ_T0017111.1 MGP_LPJ_G0015073.1 mouse_genomes_project 11 20903805 20911920 + Gm12059 processed_transcript processed_transcript MGP_LPJ_T0033355.1 MGP_LPJ_G0019291.1 mouse_genomes_project 11 119885708 119901348 + MGP_LPJ_P0033355 Armc7 protein_coding protein_coding MGP_LPJ_T0033356.1 MGP_LPJ_G0019291.1 mouse_genomes_project 11 119885739 119893388 + Armc7 protein_coding processed_transcript MGP_LPJ_T0033357.1 MGP_LPJ_G0019291.1 mouse_genomes_project 11 119885783 119894901 + Armc7 protein_coding processed_transcript MGP_LPJ_T0033358.1 MGP_LPJ_G0019291.1 mouse_genomes_project 11 119885995 119899943 + Armc7 protein_coding processed_transcript MGP_LPJ_T0028630.1 MGP_LPJ_G0018112.1 mouse_genomes_project 11 48071471 48076114 + Rack1 protein_coding retained_intron MGP_LPJ_T0028631.1 MGP_LPJ_G0018112.1 mouse_genomes_project 11 48071496 48077228 + Rack1 protein_coding processed_transcript MGP_LPJ_T0028632.1 MGP_LPJ_G0018112.1 mouse_genomes_project 11 48071499 48077574 + MGP_LPJ_P0028632 Rack1 protein_coding protein_coding MGP_LPJ_T0028633.1 MGP_LPJ_G0018112.1 mouse_genomes_project 11 48071513 48073807 + Rack1 protein_coding retained_intron MGP_LPJ_T0028634.1 MGP_LPJ_G0018112.1 mouse_genomes_project 11 48074291 48077213 + Rack1 protein_coding processed_transcript MGP_LPJ_T0028635.1 MGP_LPJ_G0018112.1 mouse_genomes_project 11 48076587 48077233 + Rack1 protein_coding processed_transcript MGP_LPJ_T0017090.1 MGP_LPJ_G0015064.1 mouse_genomes_project 11 616780 624036 - Tug1 processed_transcript antisense MGP_LPJ_T0017091.1 MGP_LPJ_G0015064.1 mouse_genomes_project 11 623358 625563 - Tug1 processed_transcript antisense MGP_LPJ_T0017092.1 MGP_LPJ_G0015064.1 mouse_genomes_project 11 624582 626194 - Tug1 processed_transcript TEC MGP_LPJ_T0009745.1 MGP_LPJ_G0007863.1 mouse_genomes_project 11 94494168 94494237 - Gm22702 miRNA miRNA MGP_LPJ_T0030596.1 MGP_LPJ_G0018612.1 mouse_genomes_project 11 76681056 76736329 + MGP_LPJ_P0030596 Smyd4 protein_coding protein_coding MGP_LPJ_T0030597.1 MGP_LPJ_G0018612.1 mouse_genomes_project 11 76681118 76712499 + Smyd4 protein_coding retained_intron MGP_LPJ_T0030598.1 MGP_LPJ_G0018612.1 mouse_genomes_project 11 76718096 76721300 + Smyd4 protein_coding processed_transcript MGP_LPJ_T0030599.1 MGP_LPJ_G0018612.1 mouse_genomes_project 11 76730240 76731265 + Smyd4 protein_coding processed_transcript MGP_LPJ_T0029622.1 MGP_LPJ_G0018378.1 mouse_genomes_project 11 64633356 64758671 - MGP_LPJ_P0029622 Cox10 protein_coding protein_coding MGP_LPJ_T0029623.1 MGP_LPJ_G0018378.1 mouse_genomes_project 11 64750608 64758673 - Cox10 protein_coding processed_transcript MGP_LPJ_T0006194.1 MGP_LPJ_G0005172.1 mouse_genomes_project 11 11504752 11621942 - lincRNA lincRNA MGP_LPJ_T0027907.1 MGP_LPJ_G0017932.1 mouse_genomes_project 11 3604884 3610511 + MGP_LPJ_P0027907 Ppia protein_coding protein_coding MGP_LPJ_T0027908.1 MGP_LPJ_G0017932.1 mouse_genomes_project 11 3605309 3607879 + Ppia protein_coding retained_intron MGP_LPJ_T0027909.1 MGP_LPJ_G0017932.1 mouse_genomes_project 11 3605317 3609050 + Ppia protein_coding retained_intron MGP_LPJ_T0027910.1 MGP_LPJ_G0017932.1 mouse_genomes_project 11 3605317 3610506 + Ppia protein_coding retained_intron MGP_LPJ_T0009681.1 MGP_LPJ_G0007799.1 mouse_genomes_project 11 36765838 36765917 - Gm25693 miRNA miRNA MGP_LPJ_T0032168.1 MGP_LPJ_G0019002.1 mouse_genomes_project 11 102696853 102697891 - MGP_LPJ_P0032168 protein_coding protein_coding MGP_LPJ_T0028431.1 MGP_LPJ_G0018056.1 mouse_genomes_project 11 32176519 32207105 + MGP_LPJ_P0028431 D130052B06Rik protein_coding protein_coding MGP_LPJ_T0032229.1 MGP_LPJ_G0019051.1 mouse_genomes_project 11 103633596 103636186 + MGP_LPJ_P0032229 Gast protein_coding protein_coding MGP_LPJ_T0034190.1 MGP_LPJ_G0019451.1 mouse_genomes_project 11 126241630 126251549 + MGP_LPJ_P0034190 Fn3krp protein_coding protein_coding MGP_LPJ_T0006358.1 MGP_LPJ_G0005300.1 mouse_genomes_project 11 106137443 106139098 - Gm11636 lincRNA lincRNA MGP_LPJ_T0029436.1 MGP_LPJ_G0018344.1 mouse_genomes_project 11 61747965 61793636 - MGP_LPJ_P0029436 Aldh3a2 protein_coding protein_coding MGP_LPJ_T0029437.1 MGP_LPJ_G0018344.1 mouse_genomes_project 11 61770008 61793636 - MGP_LPJ_P0029437 Aldh3a2 protein_coding protein_coding MGP_LPJ_T0029438.1 MGP_LPJ_G0018344.1 mouse_genomes_project 11 61772682 61793636 - MGP_LPJ_P0029438 Aldh3a2 protein_coding protein_coding MGP_LPJ_T0029439.1 MGP_LPJ_G0018344.1 mouse_genomes_project 11 61774227 61788786 - Aldh3a2 protein_coding processed_transcript MGP_LPJ_T0029440.1 MGP_LPJ_G0018344.1 mouse_genomes_project 11 61782111 61793915 - Aldh3a2 protein_coding processed_transcript MGP_LPJ_T0029441.1 MGP_LPJ_G0018344.1 mouse_genomes_project 11 61790620 61793578 - Aldh3a2 protein_coding processed_transcript MGP_LPJ_T0029442.1 MGP_LPJ_G0018344.1 mouse_genomes_project 11 61791674 61793892 - Aldh3a2 protein_coding processed_transcript MGP_LPJ_T0032774.1 MGP_LPJ_G0019157.1 mouse_genomes_project 11 106673759 106679033 + MGP_LPJ_P0032774 Hexim1 protein_coding protein_coding MGP_LPJ_T0003173.1 MGP_LPJ_G0002946.1 mouse_genomes_project 11 50274643 50275889 - Gm12199 antisense antisense MGP_LPJ_T0031756.1 MGP_LPJ_G0018893.1 mouse_genomes_project 11 98625647 98631540 + MGP_LPJ_P0031756 Phospho1 protein_coding protein_coding MGP_LPJ_T0031757.1 MGP_LPJ_G0018893.1 mouse_genomes_project 11 98625648 98634750 + MGP_LPJ_P0031757 Phospho1 protein_coding protein_coding MGP_LPJ_T0031759.1 MGP_LPJ_G0018893.1 mouse_genomes_project 11 98631601 98632431 + MGP_LPJ_P0031759 Phospho1 protein_coding protein_coding MGP_LPJ_T0030475.1 MGP_LPJ_G0018567.1 mouse_genomes_project 11 74599523 74606586 - MGP_LPJ_P0030475 Olfr1 protein_coding protein_coding MGP_LPJ_T0030476.1 MGP_LPJ_G0018567.1 mouse_genomes_project 11 74599879 74606586 - MGP_LPJ_P0030476 Olfr1 protein_coding protein_coding MGP_LPJ_T0012472.1 MGP_LPJ_G0010563.1 mouse_genomes_project 11 6071339 6073302 - processed_pseudogene processed_pseudogene MGP_LPJ_T0031792.1 MGP_LPJ_G0018904.1 mouse_genomes_project 11 99033640 99036772 + MGP_LPJ_P0031792 Hoxb13 protein_coding protein_coding MGP_LPJ_T0000882.1 MGP_LPJ_G0000811.1 mouse_genomes_project 11 44380442 44403399 - TEC TEC MGP_LPJ_T0097978.1 MGP_LPJ_G0036259.1 mouse_genomes_project 11 117718259 117722295 + pseudogene pseudogene MGP_LPJ_T0012620.1 MGP_LPJ_G0010711.1 mouse_genomes_project 11 59909842 59911324 - processed_pseudogene processed_pseudogene MGP_LPJ_T0032897.1 MGP_LPJ_G0019186.1 mouse_genomes_project 11 108990848 109027045 + Mrc2 protein_coding processed_transcript MGP_LPJ_T0032898.1 MGP_LPJ_G0019186.1 mouse_genomes_project 11 108990851 109054122 + MGP_LPJ_P0032898 Mrc2 protein_coding protein_coding MGP_LPJ_T0032899.1 MGP_LPJ_G0019186.1 mouse_genomes_project 11 108990873 109046856 + MGP_LPJ_P0032899 Mrc2 protein_coding protein_coding MGP_LPJ_T0032900.1 MGP_LPJ_G0019186.1 mouse_genomes_project 11 109029203 109032451 + Mrc2 protein_coding processed_transcript MGP_LPJ_T0032901.1 MGP_LPJ_G0019186.1 mouse_genomes_project 11 109041224 109043537 + Mrc2 protein_coding retained_intron MGP_LPJ_T0030764.1 MGP_LPJ_G0018648.1 mouse_genomes_project 11 78695506 78866387 + MGP_LPJ_P0030764 Ssh2 protein_coding protein_coding MGP_LPJ_T0030765.1 MGP_LPJ_G0018648.1 mouse_genomes_project 11 78695506 78929735 + MGP_LPJ_P0030765 Ssh2 protein_coding protein_coding MGP_LPJ_T0030766.1 MGP_LPJ_G0018648.1 mouse_genomes_project 11 78821208 78824649 + Ssh2 protein_coding retained_intron MGP_LPJ_T0030767.1 MGP_LPJ_G0018648.1 mouse_genomes_project 11 78822740 78886884 + Ssh2 protein_coding processed_transcript MGP_LPJ_T0030768.1 MGP_LPJ_G0018648.1 mouse_genomes_project 11 78822742 78925047 + MGP_LPJ_P0030768 Ssh2 protein_coding protein_coding MGP_LPJ_T0030769.1 MGP_LPJ_G0018648.1 mouse_genomes_project 11 78822748 78905219 + Ssh2 protein_coding retained_intron MGP_LPJ_T0030770.1 MGP_LPJ_G0018648.1 mouse_genomes_project 11 78864670 78867237 + Ssh2 protein_coding retained_intron MGP_LPJ_T0012544.1 MGP_LPJ_G0010635.1 mouse_genomes_project 11 29058308 29059046 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100180.1 MGP_LPJ_G0038443.1 mouse_genomes_project 11 106375861 106375998 + Gm22683 snoRNA snoRNA MGP_LPJ_T0009723.1 MGP_LPJ_G0007841.1 mouse_genomes_project 11 74113452 74113539 + Gm44467 miRNA miRNA MGP_LPJ_T0098886.1 MGP_LPJ_G0037149.1 mouse_genomes_project 11 12918711 12918818 + Gm24707 snRNA snRNA MGP_LPJ_T0101635.1 MGP_LPJ_G0039700.1 mouse_genomes_project 11 106266705 106288704 + unitary_pseudogene unitary_pseudogene MGP_LPJ_T0027840.1 MGP_LPJ_G0017916.1 mouse_genomes_project 11 2950547 2962481 + MGP_LPJ_P0027840 Dbnl protein_coding protein_coding MGP_LPJ_T0027841.1 MGP_LPJ_G0017916.1 mouse_genomes_project 11 2950581 2962139 + MGP_LPJ_P0027841 Dbnl protein_coding protein_coding MGP_LPJ_T0027842.1 MGP_LPJ_G0017916.1 mouse_genomes_project 11 2950589 2962814 + MGP_LPJ_P0027842 Dbnl protein_coding protein_coding MGP_LPJ_T0003285.1 MGP_LPJ_G0003036.1 mouse_genomes_project 11 97903355 97917286 + Dlx4os antisense antisense MGP_LPJ_T0032173.1 MGP_LPJ_G0019007.1 mouse_genomes_project 11 102737335 102738214 - MGP_LPJ_P0032173 Krtap1-3 protein_coding protein_coding MGP_LPJ_T0017225.1 MGP_LPJ_G0015133.1 mouse_genomes_project 11 122004913 122020144 + Gm11732 processed_transcript processed_transcript MGP_LPJ_T0032555.1 MGP_LPJ_G0019120.1 mouse_genomes_project 11 105518512 105551061 - MGP_LPJ_P0032555 Mpp2 protein_coding protein_coding MGP_LPJ_T0032556.1 MGP_LPJ_G0019120.1 mouse_genomes_project 11 105519021 105545068 - MGP_LPJ_P0032556 Mpp2 protein_coding protein_coding MGP_LPJ_T0032557.1 MGP_LPJ_G0019120.1 mouse_genomes_project 11 105523563 105545003 - Mpp2 protein_coding processed_transcript MGP_LPJ_T0032558.1 MGP_LPJ_G0019120.1 mouse_genomes_project 11 105526144 105548319 - Mpp2 protein_coding retained_intron MGP_LPJ_T0032559.1 MGP_LPJ_G0019120.1 mouse_genomes_project 11 105543221 105551013 - Mpp2 protein_coding processed_transcript MGP_LPJ_T0032560.1 MGP_LPJ_G0019120.1 mouse_genomes_project 11 105543275 105551001 - Mpp2 protein_coding processed_transcript MGP_LPJ_T0032422.1 MGP_LPJ_G0019093.1 mouse_genomes_project 11 104667179 104674694 + Cntd1 protein_coding processed_transcript MGP_LPJ_T0032423.1 MGP_LPJ_G0019093.1 mouse_genomes_project 11 104667263 104676850 + MGP_LPJ_P0032423 Cntd1 protein_coding protein_coding MGP_LPJ_T0032424.1 MGP_LPJ_G0019093.1 mouse_genomes_project 11 104674203 104684467 + Cntd1 protein_coding processed_transcript MGP_LPJ_T0012587.1 MGP_LPJ_G0010678.1 mouse_genomes_project 11 49622406 49623524 - processed_pseudogene processed_pseudogene MGP_LPJ_T0033332.1 MGP_LPJ_G0019287.1 mouse_genomes_project 11 119821025 119825348 - Atp5h protein_coding processed_transcript MGP_LPJ_T0033333.1 MGP_LPJ_G0019287.1 mouse_genomes_project 11 119821025 119824344 - Atp5h protein_coding processed_transcript MGP_LPJ_T0033334.1 MGP_LPJ_G0019287.1 mouse_genomes_project 11 119821025 119827300 - MGP_LPJ_P0033334 Atp5h protein_coding protein_coding MGP_LPJ_T0033335.1 MGP_LPJ_G0019287.1 mouse_genomes_project 11 119821025 119827255 - MGP_LPJ_P0033335 Atp5h protein_coding protein_coding MGP_LPJ_T0033336.1 MGP_LPJ_G0019287.1 mouse_genomes_project 11 119821025 119827300 - MGP_LPJ_P0033336 Atp5h protein_coding protein_coding MGP_LPJ_T0033337.1 MGP_LPJ_G0019287.1 mouse_genomes_project 11 119821084 119825833 - MGP_LPJ_P0033337 Atp5h protein_coding protein_coding MGP_LPJ_T0033338.1 MGP_LPJ_G0019287.1 mouse_genomes_project 11 119823143 119826067 - MGP_LPJ_P0033338 Atp5h protein_coding protein_coding MGP_LPJ_T0033339.1 MGP_LPJ_G0019287.1 mouse_genomes_project 11 119824178 119826399 - Atp5h protein_coding processed_transcript MGP_LPJ_T0033183.1 MGP_LPJ_G0019251.1 mouse_genomes_project 11 117472287 117822279 - MGP_LPJ_P0033183 Slc39a11 protein_coding protein_coding MGP_LPJ_T0033184.1 MGP_LPJ_G0019251.1 mouse_genomes_project 11 117472287 117822282 - MGP_LPJ_P0033184 Slc39a11 protein_coding protein_coding MGP_LPJ_T0033185.1 MGP_LPJ_G0019251.1 mouse_genomes_project 11 117472287 117822291 - MGP_LPJ_P0033185 Slc39a11 protein_coding protein_coding MGP_LPJ_T0033186.1 MGP_LPJ_G0019251.1 mouse_genomes_project 11 117611235 117910298 - MGP_LPJ_P0033186 Slc39a11 protein_coding protein_coding MGP_LPJ_T0033187.1 MGP_LPJ_G0019251.1 mouse_genomes_project 11 117714235 117822302 - MGP_LPJ_P0033187 Slc39a11 protein_coding protein_coding MGP_LPJ_T0033188.1 MGP_LPJ_G0019251.1 mouse_genomes_project 11 117777201 117910306 - MGP_LPJ_P0033188 Slc39a11 protein_coding protein_coding MGP_LPJ_T0033189.1 MGP_LPJ_G0019251.1 mouse_genomes_project 11 117814327 117910297 - MGP_LPJ_P0033189 Slc39a11 protein_coding protein_coding MGP_LPJ_T0033190.1 MGP_LPJ_G0019251.1 mouse_genomes_project 11 117835242 117910297 - Slc39a11 protein_coding processed_transcript MGP_LPJ_T0029718.1 MGP_LPJ_G0018404.1 mouse_genomes_project 11 68818548 68840416 - Cfap52 protein_coding processed_transcript MGP_LPJ_T0029719.1 MGP_LPJ_G0018404.1 mouse_genomes_project 11 68818550 68861547 - MGP_LPJ_P0029719 Cfap52 protein_coding protein_coding MGP_LPJ_T0029720.1 MGP_LPJ_G0018404.1 mouse_genomes_project 11 68818693 68825768 - Cfap52 protein_coding processed_transcript MGP_LPJ_T0029721.1 MGP_LPJ_G0018404.1 mouse_genomes_project 11 68833765 68861556 - MGP_LPJ_P0029721 Cfap52 protein_coding protein_coding MGP_LPJ_T0030425.1 MGP_LPJ_G0018552.1 mouse_genomes_project 11 74122781 74154462 + MGP_LPJ_P0030425 Atp2a3 protein_coding protein_coding MGP_LPJ_T0030426.1 MGP_LPJ_G0018552.1 mouse_genomes_project 11 74122781 74154462 + MGP_LPJ_P0030426 Atp2a3 protein_coding protein_coding MGP_LPJ_T0030427.1 MGP_LPJ_G0018552.1 mouse_genomes_project 11 74122781 74154462 + MGP_LPJ_P0030427 Atp2a3 protein_coding protein_coding MGP_LPJ_T0030428.1 MGP_LPJ_G0018552.1 mouse_genomes_project 11 74122781 74154463 + MGP_LPJ_P0030428 Atp2a3 protein_coding protein_coding MGP_LPJ_T0030429.1 MGP_LPJ_G0018552.1 mouse_genomes_project 11 74122781 74154463 + MGP_LPJ_P0030429 Atp2a3 protein_coding protein_coding MGP_LPJ_T0030430.1 MGP_LPJ_G0018552.1 mouse_genomes_project 11 74122902 74132356 + Atp2a3 protein_coding retained_intron MGP_LPJ_T0030431.1 MGP_LPJ_G0018552.1 mouse_genomes_project 11 74143516 74144965 + Atp2a3 protein_coding processed_transcript MGP_LPJ_T0006288.1 MGP_LPJ_G0005253.1 mouse_genomes_project 11 72527859 72534222 - Gm16013 lincRNA lincRNA MGP_LPJ_T0028861.1 MGP_LPJ_G0018180.1 mouse_genomes_project 11 51297449 51309735 - MGP_LPJ_P0028861 Rmnd5b protein_coding nonsense_mediated_decay MGP_LPJ_T0028862.1 MGP_LPJ_G0018180.1 mouse_genomes_project 11 51297451 51309984 - MGP_LPJ_P0028862 Rmnd5b protein_coding protein_coding MGP_LPJ_T0028863.1 MGP_LPJ_G0018180.1 mouse_genomes_project 11 51297817 51299613 - MGP_LPJ_P0028863 Rmnd5b protein_coding protein_coding MGP_LPJ_T0028864.1 MGP_LPJ_G0018180.1 mouse_genomes_project 11 51303086 51309841 - Rmnd5b protein_coding processed_transcript MGP_LPJ_T0029591.1 MGP_LPJ_G0018369.1 mouse_genomes_project 11 63364519 63364918 + MGP_LPJ_P0029591 Gm10428 protein_coding protein_coding MGP_LPJ_T0028872.1 MGP_LPJ_G0018184.1 mouse_genomes_project 11 51365672 51437419 - MGP_LPJ_P0028872 Sec24a protein_coding protein_coding MGP_LPJ_T0028873.1 MGP_LPJ_G0018184.1 mouse_genomes_project 11 51369102 51437012 - MGP_LPJ_P0028873 Sec24a protein_coding protein_coding MGP_LPJ_T0028874.1 MGP_LPJ_G0018184.1 mouse_genomes_project 11 51398486 51437232 - MGP_LPJ_P0028874 Sec24a protein_coding protein_coding MGP_LPJ_T0028875.1 MGP_LPJ_G0018184.1 mouse_genomes_project 11 51398486 51437239 - MGP_LPJ_P0028875 Sec24a protein_coding protein_coding MGP_LPJ_T0028876.1 MGP_LPJ_G0018184.1 mouse_genomes_project 11 51407233 51437962 - Sec24a protein_coding retained_intron MGP_LPJ_T0028877.1 MGP_LPJ_G0018184.1 mouse_genomes_project 11 51420252 51444327 - Sec24a protein_coding retained_intron MGP_LPJ_T0101766.1 MGP_LPJ_G0039804.1 mouse_genomes_project 11 58861120 58861512 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0030931.1 MGP_LPJ_G0018679.1 mouse_genomes_project 11 79858800 79873929 + MGP_LPJ_P0030931 Pigs protein_coding protein_coding MGP_LPJ_T0029296.1 MGP_LPJ_G0018316.1 mouse_genomes_project 11 60267173 60268066 - Cops3 protein_coding processed_transcript MGP_LPJ_T0029297.1 MGP_LPJ_G0018316.1 mouse_genomes_project 11 60267173 60293034 - MGP_LPJ_P0029297 Cops3 protein_coding protein_coding MGP_LPJ_T0029298.1 MGP_LPJ_G0018316.1 mouse_genomes_project 11 60272595 60288956 - MGP_LPJ_P0029298 Cops3 protein_coding protein_coding MGP_LPJ_T0029299.1 MGP_LPJ_G0018316.1 mouse_genomes_project 11 60274521 60293034 - Cops3 protein_coding processed_transcript MGP_LPJ_T0029300.1 MGP_LPJ_G0018316.1 mouse_genomes_project 11 60275549 60285314 - Cops3 protein_coding processed_transcript MGP_LPJ_T0029301.1 MGP_LPJ_G0018316.1 mouse_genomes_project 11 60277445 60293034 - Cops3 protein_coding processed_transcript MGP_LPJ_T0029302.1 MGP_LPJ_G0018316.1 mouse_genomes_project 11 60285111 60292948 - MGP_LPJ_P0029302 Cops3 protein_coding protein_coding MGP_LPJ_T0029303.1 MGP_LPJ_G0018316.1 mouse_genomes_project 11 60288658 60293008 - Cops3 protein_coding processed_transcript MGP_LPJ_T0012453.1 MGP_LPJ_G0010544.1 mouse_genomes_project 11 861724 862549 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100190.1 MGP_LPJ_G0038453.1 mouse_genomes_project 11 125839987 125840112 + Gm22152 snoRNA snoRNA MGP_LPJ_T0003250.1 MGP_LPJ_G0003010.1 mouse_genomes_project 11 79536207 79538861 - Dhrs13os antisense antisense MGP_LPJ_T0030665.1 MGP_LPJ_G0018625.1 mouse_genomes_project 11 77087176 77122706 + MGP_LPJ_P0030665 Ywhae protein_coding protein_coding MGP_LPJ_T0030666.1 MGP_LPJ_G0018625.1 mouse_genomes_project 11 77087220 77121486 + MGP_LPJ_P0030666 Ywhae protein_coding nonsense_mediated_decay MGP_LPJ_T0030667.1 MGP_LPJ_G0018625.1 mouse_genomes_project 11 77087268 77112966 + Ywhae protein_coding retained_intron MGP_LPJ_T0030668.1 MGP_LPJ_G0018625.1 mouse_genomes_project 11 77087455 77112722 + MGP_LPJ_P0030668 Ywhae protein_coding protein_coding MGP_LPJ_T0030669.1 MGP_LPJ_G0018625.1 mouse_genomes_project 11 77107446 77115164 + Ywhae protein_coding retained_intron MGP_LPJ_T0032477.1 MGP_LPJ_G0019107.1 mouse_genomes_project 11 104898190 104964417 - MGP_LPJ_P0032477 Brca1 protein_coding protein_coding MGP_LPJ_T0032478.1 MGP_LPJ_G0019107.1 mouse_genomes_project 11 104906932 104918613 - Brca1 protein_coding retained_intron MGP_LPJ_T0032479.1 MGP_LPJ_G0019107.1 mouse_genomes_project 11 104922921 104933502 - Brca1 protein_coding retained_intron MGP_LPJ_T0032480.1 MGP_LPJ_G0019107.1 mouse_genomes_project 11 104935235 104935901 - MGP_LPJ_P0032480 Brca1 protein_coding protein_coding MGP_LPJ_T0032481.1 MGP_LPJ_G0019107.1 mouse_genomes_project 11 104935249 104936249 - Brca1 protein_coding processed_transcript MGP_LPJ_T0032482.1 MGP_LPJ_G0019107.1 mouse_genomes_project 11 104936549 104964493 - MGP_LPJ_P0032482 Brca1 protein_coding nonsense_mediated_decay MGP_LPJ_T0032483.1 MGP_LPJ_G0019107.1 mouse_genomes_project 11 104942995 104964120 - MGP_LPJ_P0032483 Brca1 protein_coding protein_coding MGP_LPJ_T0033782.1 MGP_LPJ_G0019370.1 mouse_genomes_project 11 123075387 123090671 + MGP_LPJ_P0033782 C1qtnf1 protein_coding protein_coding MGP_LPJ_T0033783.1 MGP_LPJ_G0019370.1 mouse_genomes_project 11 123075633 123096804 + MGP_LPJ_P0033783 C1qtnf1 protein_coding protein_coding MGP_LPJ_T0033784.1 MGP_LPJ_G0019370.1 mouse_genomes_project 11 123080932 123096804 + MGP_LPJ_P0033784 C1qtnf1 protein_coding protein_coding MGP_LPJ_T0033785.1 MGP_LPJ_G0019370.1 mouse_genomes_project 11 123090304 123090678 + MGP_LPJ_P0033785 C1qtnf1 protein_coding protein_coding MGP_LPJ_T0012510.1 MGP_LPJ_G0010601.1 mouse_genomes_project 11 19026447 19026627 - processed_pseudogene processed_pseudogene MGP_LPJ_T0031869.1 MGP_LPJ_G0018924.1 mouse_genomes_project 11 99936018 99940039 + MGP_LPJ_P0031869 Scrn2 protein_coding protein_coding MGP_LPJ_T0031870.1 MGP_LPJ_G0018924.1 mouse_genomes_project 11 99936032 99937287 + Scrn2 protein_coding retained_intron MGP_LPJ_T0031871.1 MGP_LPJ_G0018924.1 mouse_genomes_project 11 99936081 99940031 + Scrn2 protein_coding retained_intron MGP_LPJ_T0031872.1 MGP_LPJ_G0018924.1 mouse_genomes_project 11 99936214 99938357 + MGP_LPJ_P0031872 Scrn2 protein_coding protein_coding MGP_LPJ_T0012586.1 MGP_LPJ_G0010677.1 mouse_genomes_project 11 49259401 49259780 + processed_pseudogene processed_pseudogene MGP_LPJ_T0028907.1 MGP_LPJ_G0018192.1 mouse_genomes_project 11 51956901 51969989 + MGP_LPJ_P0028907 protein_coding nonsense_mediated_decay MGP_LPJ_T0028908.1 MGP_LPJ_G0018192.1 mouse_genomes_project 11 51956943 51963324 + protein_coding retained_intron MGP_LPJ_T0028909.1 MGP_LPJ_G0018192.1 mouse_genomes_project 11 51956943 51969992 + MGP_LPJ_P0028909 protein_coding protein_coding MGP_LPJ_T0028910.1 MGP_LPJ_G0018192.1 mouse_genomes_project 11 51956943 51970915 + MGP_LPJ_P0028910 protein_coding unknown_likely_coding MGP_LPJ_T0028911.1 MGP_LPJ_G0018192.1 mouse_genomes_project 11 51961763 51970947 + MGP_LPJ_P0028911 protein_coding nonsense_mediated_decay MGP_LPJ_T0034186.1 MGP_LPJ_G0019450.1 mouse_genomes_project 11 126181617 126215385 - MGP_LPJ_P0034186 Rab40b protein_coding protein_coding MGP_LPJ_T0034187.1 MGP_LPJ_G0019450.1 mouse_genomes_project 11 126183493 126215199 - Rab40b protein_coding processed_transcript MGP_LPJ_T0034188.1 MGP_LPJ_G0019450.1 mouse_genomes_project 11 126185082 126215355 - Rab40b protein_coding processed_transcript MGP_LPJ_T0034189.1 MGP_LPJ_G0019450.1 mouse_genomes_project 11 126185101 126215364 - Rab40b protein_coding processed_transcript MGP_LPJ_T0009783.1 MGP_LPJ_G0007901.1 mouse_genomes_project 11 123829124 123829186 - Mir6934 miRNA miRNA MGP_LPJ_T0029785.1 MGP_LPJ_G0018420.1 mouse_genomes_project 11 70000908 70010962 + Ctc1 protein_coding retained_intron MGP_LPJ_T0029786.1 MGP_LPJ_G0018420.1 mouse_genomes_project 11 70001068 70022292 + MGP_LPJ_P0029786 Ctc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0029787.1 MGP_LPJ_G0018420.1 mouse_genomes_project 11 70001079 70022289 + MGP_LPJ_P0029787 Ctc1 protein_coding protein_coding MGP_LPJ_T0029788.1 MGP_LPJ_G0018420.1 mouse_genomes_project 11 70001084 70022294 + MGP_LPJ_P0029788 Ctc1 protein_coding protein_coding MGP_LPJ_T0029789.1 MGP_LPJ_G0018420.1 mouse_genomes_project 11 70001116 70008564 + Ctc1 protein_coding processed_transcript MGP_LPJ_T0029790.1 MGP_LPJ_G0018420.1 mouse_genomes_project 11 70013489 70015014 + Ctc1 protein_coding retained_intron MGP_LPJ_T0029791.1 MGP_LPJ_G0018420.1 mouse_genomes_project 11 70014875 70017371 + Ctc1 protein_coding processed_transcript MGP_LPJ_T0029792.1 MGP_LPJ_G0018420.1 mouse_genomes_project 11 70017051 70020767 + Ctc1 protein_coding processed_transcript MGP_LPJ_T0029793.1 MGP_LPJ_G0018420.1 mouse_genomes_project 11 70019693 70021640 + Ctc1 protein_coding retained_intron MGP_LPJ_T0029794.1 MGP_LPJ_G0018420.1 mouse_genomes_project 11 70020339 70021625 + Ctc1 protein_coding retained_intron MGP_LPJ_T0029795.1 MGP_LPJ_G0018420.1 mouse_genomes_project 11 70020697 70021999 + Ctc1 protein_coding retained_intron MGP_LPJ_T0033558.1 MGP_LPJ_G0019325.1 mouse_genomes_project 11 120771236 120790572 - Exoc7 protein_coding processed_transcript MGP_LPJ_T0033559.1 MGP_LPJ_G0019325.1 mouse_genomes_project 11 120771236 120790572 - MGP_LPJ_P0033559 Exoc7 protein_coding protein_coding MGP_LPJ_T0033560.1 MGP_LPJ_G0019325.1 mouse_genomes_project 11 120771236 120790572 - MGP_LPJ_P0033560 Exoc7 protein_coding protein_coding MGP_LPJ_T0033561.1 MGP_LPJ_G0019325.1 mouse_genomes_project 11 120771236 120790572 - MGP_LPJ_P0033561 Exoc7 protein_coding protein_coding MGP_LPJ_T0033562.1 MGP_LPJ_G0019325.1 mouse_genomes_project 11 120772298 120773704 - Exoc7 protein_coding processed_transcript MGP_LPJ_T0033563.1 MGP_LPJ_G0019325.1 mouse_genomes_project 11 120772344 120774694 - Exoc7 protein_coding processed_transcript MGP_LPJ_T0033564.1 MGP_LPJ_G0019325.1 mouse_genomes_project 11 120775795 120781026 - Exoc7 protein_coding processed_transcript MGP_LPJ_T0033565.1 MGP_LPJ_G0019325.1 mouse_genomes_project 11 120778939 120790490 - MGP_LPJ_P0033565 Exoc7 protein_coding protein_coding MGP_LPJ_T0033566.1 MGP_LPJ_G0019325.1 mouse_genomes_project 11 120788450 120790565 - MGP_LPJ_P0033566 Exoc7 protein_coding protein_coding MGP_LPJ_T0033567.1 MGP_LPJ_G0019325.1 mouse_genomes_project 11 120788869 120791071 - MGP_LPJ_P0033567 Exoc7 protein_coding protein_coding MGP_LPJ_T0006325.1 MGP_LPJ_G0005279.1 mouse_genomes_project 11 90255714 90263973 + Gm15892 lincRNA lincRNA MGP_LPJ_T0006326.1 MGP_LPJ_G0005279.1 mouse_genomes_project 11 90262858 90263521 + Gm15892 lincRNA lincRNA MGP_LPJ_T0006327.1 MGP_LPJ_G0005279.1 mouse_genomes_project 11 90262918 90263949 + Gm15892 lincRNA lincRNA MGP_LPJ_T0033882.1 MGP_LPJ_G0019390.1 mouse_genomes_project 11 124653218 124655482 + MGP_LPJ_P0033882 Chmp6 protein_coding protein_coding MGP_LPJ_T0033883.1 MGP_LPJ_G0019390.1 mouse_genomes_project 11 124653263 124658926 + MGP_LPJ_P0033883 Chmp6 protein_coding protein_coding MGP_LPJ_T0033884.1 MGP_LPJ_G0019390.1 mouse_genomes_project 11 124655209 124658436 + Chmp6 protein_coding retained_intron MGP_LPJ_T0033885.1 MGP_LPJ_G0019390.1 mouse_genomes_project 11 124656118 124658016 + Chmp6 protein_coding retained_intron MGP_LPJ_T0009691.1 MGP_LPJ_G0007809.1 mouse_genomes_project 11 51804138 51804249 - Gm24157 miRNA miRNA MGP_LPJ_T0003273.1 MGP_LPJ_G0003028.1 mouse_genomes_project 11 89202661 89207995 - Gm11491 antisense antisense MGP_LPJ_T0003274.1 MGP_LPJ_G0003028.1 mouse_genomes_project 11 89202879 89208048 - Gm11491 antisense antisense MGP_LPJ_T0006253.1 MGP_LPJ_G0005223.1 mouse_genomes_project 11 45792092 45793185 - lincRNA lincRNA MGP_LPJ_T0029001.1 MGP_LPJ_G0018219.1 mouse_genomes_project 11 53887005 53934739 - MGP_LPJ_P0029001 Slc22a4 protein_coding protein_coding MGP_LPJ_T0029002.1 MGP_LPJ_G0018219.1 mouse_genomes_project 11 53895941 53912380 - Slc22a4 protein_coding processed_transcript MGP_LPJ_T0029003.1 MGP_LPJ_G0018219.1 mouse_genomes_project 11 53918659 53934601 - Slc22a4 protein_coding processed_transcript MGP_LPJ_T0033586.1 MGP_LPJ_G0019331.1 mouse_genomes_project 11 120975264 120997065 - Prpsap1 protein_coding processed_transcript MGP_LPJ_T0033587.1 MGP_LPJ_G0019331.1 mouse_genomes_project 11 120975264 120997099 - MGP_LPJ_P0033587 Prpsap1 protein_coding protein_coding MGP_LPJ_T0033588.1 MGP_LPJ_G0019331.1 mouse_genomes_project 11 120975718 120982753 - Prpsap1 protein_coding processed_transcript MGP_LPJ_T0033589.1 MGP_LPJ_G0019331.1 mouse_genomes_project 11 120975795 120977663 - Prpsap1 protein_coding processed_transcript MGP_LPJ_T0033590.1 MGP_LPJ_G0019331.1 mouse_genomes_project 11 120975819 120982172 - Prpsap1 protein_coding processed_transcript MGP_LPJ_T0033591.1 MGP_LPJ_G0019331.1 mouse_genomes_project 11 120982492 121003456 - MGP_LPJ_P0033591 Prpsap1 protein_coding protein_coding MGP_LPJ_T0033592.1 MGP_LPJ_G0019331.1 mouse_genomes_project 11 120982724 120997040 - Prpsap1 protein_coding processed_transcript MGP_LPJ_T0033593.1 MGP_LPJ_G0019331.1 mouse_genomes_project 11 120982966 120997086 - MGP_LPJ_P0033593 Prpsap1 protein_coding protein_coding MGP_LPJ_T0033594.1 MGP_LPJ_G0019331.1 mouse_genomes_project 11 120992247 120997078 - Prpsap1 protein_coding processed_transcript MGP_LPJ_T0028807.1 MGP_LPJ_G0018164.1 mouse_genomes_project 11 50466184 50478283 - MGP_LPJ_P0028807 Zfp2 protein_coding protein_coding MGP_LPJ_T0028808.1 MGP_LPJ_G0018164.1 mouse_genomes_project 11 50466184 50483609 - MGP_LPJ_P0028808 Zfp2 protein_coding protein_coding MGP_LPJ_T0028809.1 MGP_LPJ_G0018164.1 mouse_genomes_project 11 50466531 50483632 - MGP_LPJ_P0028809 Zfp2 protein_coding protein_coding MGP_LPJ_T0028810.1 MGP_LPJ_G0018164.1 mouse_genomes_project 11 50468719 50483598 - Zfp2 protein_coding processed_transcript MGP_LPJ_T0028811.1 MGP_LPJ_G0018164.1 mouse_genomes_project 11 50472656 50483619 - Zfp2 protein_coding processed_transcript MGP_LPJ_T0028812.1 MGP_LPJ_G0018164.1 mouse_genomes_project 11 50473462 50483601 - Zfp2 protein_coding processed_transcript MGP_LPJ_T0017170.1 MGP_LPJ_G0015106.1 mouse_genomes_project 11 87817211 87860632 - 2610027K06Rik processed_transcript processed_transcript MGP_LPJ_T0017171.1 MGP_LPJ_G0015106.1 mouse_genomes_project 11 87821342 87860646 - 2610027K06Rik processed_transcript processed_transcript MGP_LPJ_T0017172.1 MGP_LPJ_G0015106.1 mouse_genomes_project 11 87821428 87831114 - 2610027K06Rik processed_transcript processed_transcript MGP_LPJ_T0034099.1 MGP_LPJ_G0019431.1 mouse_genomes_project 11 125568550 125571856 - Rfng protein_coding processed_transcript MGP_LPJ_T0034100.1 MGP_LPJ_G0019431.1 mouse_genomes_project 11 125568552 125571878 - MGP_LPJ_P0034100 Rfng protein_coding protein_coding MGP_LPJ_T0098121.1 MGP_LPJ_G0036402.1 mouse_genomes_project 11 75540805 75540924 + n-R5s71 rRNA rRNA MGP_LPJ_T0030478.1 MGP_LPJ_G0018569.1 mouse_genomes_project 11 74692217 74695619 - MGP_LPJ_P0030478 Olfr381 protein_coding protein_coding MGP_LPJ_T0029826.1 MGP_LPJ_G0018428.1 mouse_genomes_project 11 70118170 70141471 + MGP_LPJ_P0029826 Aloxe3 protein_coding protein_coding MGP_LPJ_T0029827.1 MGP_LPJ_G0018428.1 mouse_genomes_project 11 70118489 70127794 + Aloxe3 protein_coding retained_intron MGP_LPJ_T0029828.1 MGP_LPJ_G0018428.1 mouse_genomes_project 11 70118677 70126767 + MGP_LPJ_P0029828 Aloxe3 protein_coding nonsense_mediated_decay MGP_LPJ_T0029829.1 MGP_LPJ_G0018428.1 mouse_genomes_project 11 70126384 70127349 + Aloxe3 protein_coding retained_intron MGP_LPJ_T0029830.1 MGP_LPJ_G0018428.1 mouse_genomes_project 11 70126559 70135142 + Aloxe3 protein_coding retained_intron MGP_LPJ_T0029831.1 MGP_LPJ_G0018428.1 mouse_genomes_project 11 70127825 70135220 + Aloxe3 protein_coding retained_intron MGP_LPJ_T0098394.1 MGP_LPJ_G0036675.1 mouse_genomes_project 11 9323472 9323600 - Gm25058 scaRNA scaRNA MGP_LPJ_T0029264.1 MGP_LPJ_G0018307.1 mouse_genomes_project 11 59883811 59892197 + MGP_LPJ_P0029264 Jmjd4 protein_coding protein_coding MGP_LPJ_T0029265.1 MGP_LPJ_G0018307.1 mouse_genomes_project 11 59883811 59892291 + MGP_LPJ_P0029265 Jmjd4 protein_coding nonsense_mediated_decay MGP_LPJ_T0029266.1 MGP_LPJ_G0018307.1 mouse_genomes_project 11 59883811 59892197 + MGP_LPJ_P0029266 Jmjd4 protein_coding protein_coding MGP_LPJ_T0029267.1 MGP_LPJ_G0018307.1 mouse_genomes_project 11 59883887 59889830 + Jmjd4 protein_coding retained_intron MGP_LPJ_T0003339.1 MGP_LPJ_G0003081.1 mouse_genomes_project 11 110830219 110830446 + antisense antisense MGP_LPJ_T0012575.1 MGP_LPJ_G0010666.1 mouse_genomes_project 11 45176051 45176393 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011330.1 MGP_LPJ_G0009448.1 mouse_genomes_project 11 105961478 105961729 - Gm23563 misc_RNA misc_RNA MGP_LPJ_T0012546.1 MGP_LPJ_G0010637.1 mouse_genomes_project 11 29266194 29267174 - processed_pseudogene processed_pseudogene MGP_LPJ_T0029804.1 MGP_LPJ_G0018422.1 mouse_genomes_project 11 70052259 70054121 + MGP_LPJ_P0029804 Borcs6 protein_coding protein_coding MGP_LPJ_T0030876.1 MGP_LPJ_G0018669.1 mouse_genomes_project 11 79694080 79697850 + MGP_LPJ_P0030876 Tlcd1 protein_coding protein_coding MGP_LPJ_T0030877.1 MGP_LPJ_G0018669.1 mouse_genomes_project 11 79695499 79696992 + MGP_LPJ_P0030877 Tlcd1 protein_coding protein_coding MGP_LPJ_T0030878.1 MGP_LPJ_G0018669.1 mouse_genomes_project 11 79695518 79697524 + Tlcd1 protein_coding processed_transcript MGP_LPJ_T0030879.1 MGP_LPJ_G0018669.1 mouse_genomes_project 11 79696020 79699279 + MGP_LPJ_P0030879 Tlcd1 protein_coding protein_coding MGP_LPJ_T0030880.1 MGP_LPJ_G0018669.1 mouse_genomes_project 11 79696054 79698190 + MGP_LPJ_P0030880 Tlcd1 protein_coding protein_coding MGP_LPJ_T0030881.1 MGP_LPJ_G0018669.1 mouse_genomes_project 11 79696100 79696977 + Tlcd1 protein_coding retained_intron MGP_LPJ_T0030882.1 MGP_LPJ_G0018669.1 mouse_genomes_project 11 79696131 79697245 + MGP_LPJ_P0030882 Tlcd1 protein_coding protein_coding MGP_LPJ_T0030883.1 MGP_LPJ_G0018669.1 mouse_genomes_project 11 79696642 79697461 + Tlcd1 protein_coding retained_intron MGP_LPJ_T0033712.1 MGP_LPJ_G0019352.1 mouse_genomes_project 11 122385908 122388804 + MGP_LPJ_P0033712 Tmc8 protein_coding protein_coding MGP_LPJ_T0033713.1 MGP_LPJ_G0019352.1 mouse_genomes_project 11 122386129 122397671 + MGP_LPJ_P0033713 Tmc8 protein_coding protein_coding MGP_LPJ_T0033714.1 MGP_LPJ_G0019352.1 mouse_genomes_project 11 122386147 122397753 + MGP_LPJ_P0033714 Tmc8 protein_coding protein_coding MGP_LPJ_T0033715.1 MGP_LPJ_G0019352.1 mouse_genomes_project 11 122386217 122397486 + MGP_LPJ_P0033715 Tmc8 protein_coding protein_coding MGP_LPJ_T0033716.1 MGP_LPJ_G0019352.1 mouse_genomes_project 11 122387311 122397726 + MGP_LPJ_P0033716 Tmc8 protein_coding protein_coding MGP_LPJ_T0033717.1 MGP_LPJ_G0019352.1 mouse_genomes_project 11 122395790 122397216 + Tmc8 protein_coding retained_intron MGP_LPJ_T0028247.1 MGP_LPJ_G0018012.1 mouse_genomes_project 11 27109938 27180591 + MGP_LPJ_P0028247 Efemp1 protein_coding protein_coding MGP_LPJ_T0028248.1 MGP_LPJ_G0018012.1 mouse_genomes_project 11 27109978 27175364 + Efemp1 protein_coding processed_transcript MGP_LPJ_T0028249.1 MGP_LPJ_G0018012.1 mouse_genomes_project 11 27169498 27180591 + MGP_LPJ_P0028249 Efemp1 protein_coding protein_coding MGP_LPJ_T0030522.1 MGP_LPJ_G0018593.1 mouse_genomes_project 11 75523470 75524559 + MGP_LPJ_P0030522 Olfr406 protein_coding protein_coding MGP_LPJ_T0029709.1 MGP_LPJ_G0018402.1 mouse_genomes_project 11 68690906 68693527 + Dhrs7c protein_coding processed_transcript MGP_LPJ_T0029710.1 MGP_LPJ_G0018402.1 mouse_genomes_project 11 68690990 68693895 + Dhrs7c protein_coding processed_transcript MGP_LPJ_T0029711.1 MGP_LPJ_G0018402.1 mouse_genomes_project 11 68690995 68694056 + Dhrs7c protein_coding processed_transcript MGP_LPJ_T0029712.1 MGP_LPJ_G0018402.1 mouse_genomes_project 11 68690996 68691786 + Dhrs7c protein_coding processed_transcript MGP_LPJ_T0029713.1 MGP_LPJ_G0018402.1 mouse_genomes_project 11 68691006 68710113 + MGP_LPJ_P0029713 Dhrs7c protein_coding protein_coding MGP_LPJ_T0030495.1 MGP_LPJ_G0018580.1 mouse_genomes_project 11 75092585 75093518 - MGP_LPJ_P0030495 Olfr394 protein_coding protein_coding MGP_LPJ_T0098948.1 MGP_LPJ_G0037211.1 mouse_genomes_project 11 105060477 105060690 + Gm23849 snRNA snRNA MGP_LPJ_T0006226.1 MGP_LPJ_G0005199.1 mouse_genomes_project 11 27858081 27859917 + Gm12088 lincRNA lincRNA MGP_LPJ_T0032095.1 MGP_LPJ_G0018977.1 mouse_genomes_project 11 101860897 101873286 + MGP_LPJ_P0032095 Msl1 protein_coding protein_coding MGP_LPJ_T0032096.1 MGP_LPJ_G0018977.1 mouse_genomes_project 11 101861227 101866488 + MGP_LPJ_P0032096 Msl1 protein_coding protein_coding MGP_LPJ_T0032097.1 MGP_LPJ_G0018977.1 mouse_genomes_project 11 101861236 101871869 + MGP_LPJ_P0032097 Msl1 protein_coding protein_coding MGP_LPJ_T0032098.1 MGP_LPJ_G0018977.1 mouse_genomes_project 11 101864089 101871042 + MGP_LPJ_P0032098 Msl1 protein_coding protein_coding MGP_LPJ_T0032099.1 MGP_LPJ_G0018977.1 mouse_genomes_project 11 101865600 101869554 + MGP_LPJ_P0032099 Msl1 protein_coding protein_coding MGP_LPJ_T0032100.1 MGP_LPJ_G0018977.1 mouse_genomes_project 11 101869705 101871214 + Msl1 protein_coding processed_transcript MGP_LPJ_T0003147.1 MGP_LPJ_G0002923.1 mouse_genomes_project 11 15530300 15536100 + Etaa1os antisense antisense MGP_LPJ_T0003148.1 MGP_LPJ_G0002923.1 mouse_genomes_project 11 15530334 15531482 + Etaa1os antisense antisense MGP_LPJ_T0009781.1 MGP_LPJ_G0007899.1 mouse_genomes_project 11 122626508 122626589 + Mir6933 miRNA miRNA MGP_LPJ_T0032370.1 MGP_LPJ_G0019081.1 mouse_genomes_project 11 104452503 104456117 - MGP_LPJ_P0032370 Psmc3ip protein_coding protein_coding MGP_LPJ_T0032371.1 MGP_LPJ_G0019081.1 mouse_genomes_project 11 104452812 104456081 - Psmc3ip protein_coding retained_intron MGP_LPJ_T0032372.1 MGP_LPJ_G0019081.1 mouse_genomes_project 11 104452837 104454841 - Psmc3ip protein_coding retained_intron MGP_LPJ_T0032373.1 MGP_LPJ_G0019081.1 mouse_genomes_project 11 104453167 104456057 - MGP_LPJ_P0032373 Psmc3ip protein_coding nonsense_mediated_decay MGP_LPJ_T0028989.1 MGP_LPJ_G0018215.1 mouse_genomes_project 11 53637979 53639690 - MGP_LPJ_P0028989 Gm17334 protein_coding protein_coding MGP_LPJ_T0012582.1 MGP_LPJ_G0010673.1 mouse_genomes_project 11 48013467 48017735 - processed_pseudogene processed_pseudogene MGP_LPJ_T0029361.1 MGP_LPJ_G0018326.1 mouse_genomes_project 11 60899916 60937143 + MGP_LPJ_P0029361 Gid4 protein_coding nonsense_mediated_decay MGP_LPJ_T0029362.1 MGP_LPJ_G0018326.1 mouse_genomes_project 11 60900033 60929239 + MGP_LPJ_P0029362 Gid4 protein_coding protein_coding MGP_LPJ_T0006233.1 MGP_LPJ_G0005204.1 mouse_genomes_project 11 31302119 31303083 - 4930555O08Rik lincRNA lincRNA MGP_LPJ_T0012720.1 MGP_LPJ_G0010811.1 mouse_genomes_project 11 99666715 99667102 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006254.1 MGP_LPJ_G0005224.1 mouse_genomes_project 11 45829305 45838807 - Gm4926 lincRNA lincRNA MGP_LPJ_T0030264.1 MGP_LPJ_G0018518.1 mouse_genomes_project 11 71813874 71827777 - MGP_LPJ_P0030264 Inca1 protein_coding protein_coding MGP_LPJ_T0030265.1 MGP_LPJ_G0018518.1 mouse_genomes_project 11 71813874 71827777 - MGP_LPJ_P0030265 Inca1 protein_coding protein_coding MGP_LPJ_T0030266.1 MGP_LPJ_G0018518.1 mouse_genomes_project 11 71813874 71827777 - MGP_LPJ_P0030266 Inca1 protein_coding protein_coding MGP_LPJ_T0030267.1 MGP_LPJ_G0018518.1 mouse_genomes_project 11 71813874 71827777 - MGP_LPJ_P0030267 Inca1 protein_coding protein_coding MGP_LPJ_T0030268.1 MGP_LPJ_G0018518.1 mouse_genomes_project 11 71813882 71827731 - MGP_LPJ_P0030268 Inca1 protein_coding protein_coding MGP_LPJ_T0030710.1 MGP_LPJ_G0018635.1 mouse_genomes_project 11 77646066 77652980 + MGP_LPJ_P0030710 Rnmtl1 protein_coding protein_coding MGP_LPJ_T0030711.1 MGP_LPJ_G0018635.1 mouse_genomes_project 11 77646087 77647235 + Rnmtl1 protein_coding retained_intron MGP_LPJ_T0030712.1 MGP_LPJ_G0018635.1 mouse_genomes_project 11 77651571 77652868 + Rnmtl1 protein_coding processed_transcript MGP_LPJ_T0012638.1 MGP_LPJ_G0010729.1 mouse_genomes_project 11 64475594 64476876 - processed_pseudogene processed_pseudogene MGP_LPJ_T0031751.1 MGP_LPJ_G0018891.1 mouse_genomes_project 11 98503567 98569877 + MGP_LPJ_P0031751 Zfp652 protein_coding protein_coding MGP_LPJ_T0031752.1 MGP_LPJ_G0018891.1 mouse_genomes_project 11 98504363 98639772 + MGP_LPJ_P0031752 Zfp652 protein_coding nonsense_mediated_decay MGP_LPJ_T0031754.1 MGP_LPJ_G0018891.1 mouse_genomes_project 11 98544191 98569877 + MGP_LPJ_P0031754 Zfp652 protein_coding nonsense_mediated_decay MGP_LPJ_T0031755.1 MGP_LPJ_G0018891.1 mouse_genomes_project 11 98544258 98562244 + MGP_LPJ_P0031755 Zfp652 protein_coding protein_coding MGP_LPJ_T0032539.1 MGP_LPJ_G0019117.1 mouse_genomes_project 11 105442456 105450407 + MGP_LPJ_P0032539 1700006E09Rik protein_coding protein_coding MGP_LPJ_T0032540.1 MGP_LPJ_G0019117.1 mouse_genomes_project 11 105442461 105449001 + MGP_LPJ_P0032540 1700006E09Rik protein_coding protein_coding MGP_LPJ_T0032541.1 MGP_LPJ_G0019117.1 mouse_genomes_project 11 105445230 105450415 + MGP_LPJ_P0032541 1700006E09Rik protein_coding protein_coding MGP_LPJ_T0033519.1 MGP_LPJ_G0019317.1 mouse_genomes_project 11 120592310 120601611 - MGP_LPJ_P0033519 Trim65 protein_coding protein_coding MGP_LPJ_T0033520.1 MGP_LPJ_G0019317.1 mouse_genomes_project 11 120595191 120601615 - Trim65 protein_coding processed_transcript MGP_LPJ_T0033521.1 MGP_LPJ_G0019317.1 mouse_genomes_project 11 120595191 120601613 - MGP_LPJ_P0033521 Trim65 protein_coding protein_coding MGP_LPJ_T0033321.1 MGP_LPJ_G0019285.1 mouse_genomes_project 11 119782042 119800004 + MGP_LPJ_P0033321 Cdr2l protein_coding protein_coding MGP_LPJ_T0006289.1 MGP_LPJ_G0005254.1 mouse_genomes_project 11 72606933 72664986 + 9230020A06Rik lincRNA lincRNA MGP_LPJ_T0006290.1 MGP_LPJ_G0005254.1 mouse_genomes_project 11 72639629 72664279 + 9230020A06Rik lincRNA lincRNA MGP_LPJ_T0031484.1 MGP_LPJ_G0018825.1 mouse_genomes_project 11 90295788 90297837 + Cuedc1 protein_coding processed_transcript MGP_LPJ_T0031485.1 MGP_LPJ_G0018825.1 mouse_genomes_project 11 90296874 90398091 + MGP_LPJ_P0031485 Cuedc1 protein_coding protein_coding MGP_LPJ_T0031486.1 MGP_LPJ_G0018825.1 mouse_genomes_project 11 90297018 90385408 + Cuedc1 protein_coding retained_intron MGP_LPJ_T0031487.1 MGP_LPJ_G0018825.1 mouse_genomes_project 11 90359486 90398091 + MGP_LPJ_P0031487 Cuedc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0031488.1 MGP_LPJ_G0018825.1 mouse_genomes_project 11 90382352 90383330 + Cuedc1 protein_coding retained_intron MGP_LPJ_T0031489.1 MGP_LPJ_G0018825.1 mouse_genomes_project 11 90387637 90391973 + Cuedc1 protein_coding processed_transcript MGP_LPJ_T0031490.1 MGP_LPJ_G0018825.1 mouse_genomes_project 11 90390972 90395802 + Cuedc1 protein_coding retained_intron MGP_LPJ_T0028626.1 MGP_LPJ_G0018111.1 mouse_genomes_project 11 46110861 46797224 - MGP_LPJ_P0028626 Sgcd protein_coding protein_coding MGP_LPJ_T0028627.1 MGP_LPJ_G0018111.1 mouse_genomes_project 11 46190810 46607026 - MGP_LPJ_P0028627 Sgcd protein_coding protein_coding MGP_LPJ_T0028628.1 MGP_LPJ_G0018111.1 mouse_genomes_project 11 46578173 46855091 - Sgcd protein_coding processed_transcript MGP_LPJ_T0028629.1 MGP_LPJ_G0018111.1 mouse_genomes_project 11 46797063 47213781 - Sgcd protein_coding processed_transcript MGP_LPJ_T0009695.1 MGP_LPJ_G0007813.1 mouse_genomes_project 11 54587310 54587387 - Gm26116 miRNA miRNA MGP_LPJ_T0012451.1 MGP_LPJ_G0010542.1 mouse_genomes_project 11 609612 610043 - processed_pseudogene processed_pseudogene MGP_LPJ_T0029832.1 MGP_LPJ_G0018429.1 mouse_genomes_project 11 70149129 70162195 + MGP_LPJ_P0029832 Alox12b protein_coding protein_coding MGP_LPJ_T0032170.1 MGP_LPJ_G0019004.1 mouse_genomes_project 11 102713401 102714008 - MGP_LPJ_P0032170 Krtap3-1 protein_coding protein_coding MGP_LPJ_T0006206.1 MGP_LPJ_G0005183.1 mouse_genomes_project 11 20410643 20422286 - Gm26829 lincRNA lincRNA MGP_LPJ_T0028651.1 MGP_LPJ_G0018117.1 mouse_genomes_project 11 48182756 48214855 - MGP_LPJ_P0028651 Gm12185 protein_coding protein_coding MGP_LPJ_T0028654.1 MGP_LPJ_G0018117.1 mouse_genomes_project 11 48200504 48214875 - Gm12185 protein_coding processed_transcript MGP_LPJ_T0012630.1 MGP_LPJ_G0010721.1 mouse_genomes_project 11 61730271 61730727 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012497.1 MGP_LPJ_G0010588.1 mouse_genomes_project 11 16983530 16984554 + processed_pseudogene processed_pseudogene MGP_LPJ_T0028774.1 MGP_LPJ_G0018157.1 mouse_genomes_project 11 49896535 49906172 + MGP_LPJ_P0028774 Hnrnph1 protein_coding protein_coding MGP_LPJ_T0028775.1 MGP_LPJ_G0018157.1 mouse_genomes_project 11 49897296 49906172 + Hnrnph1 protein_coding processed_transcript MGP_LPJ_T0028776.1 MGP_LPJ_G0018157.1 mouse_genomes_project 11 49897310 49902147 + Hnrnph1 protein_coding processed_transcript MGP_LPJ_T0028777.1 MGP_LPJ_G0018157.1 mouse_genomes_project 11 49897314 49905462 + Hnrnph1 protein_coding processed_transcript MGP_LPJ_T0028778.1 MGP_LPJ_G0018157.1 mouse_genomes_project 11 49897314 49902733 + Hnrnph1 protein_coding processed_transcript MGP_LPJ_T0028779.1 MGP_LPJ_G0018157.1 mouse_genomes_project 11 49897836 49901678 + Hnrnph1 protein_coding processed_transcript MGP_LPJ_T0028780.1 MGP_LPJ_G0018157.1 mouse_genomes_project 11 49897836 49900516 + Hnrnph1 protein_coding processed_transcript MGP_LPJ_T0028781.1 MGP_LPJ_G0018157.1 mouse_genomes_project 11 49897836 49899736 + Hnrnph1 protein_coding processed_transcript MGP_LPJ_T0028782.1 MGP_LPJ_G0018157.1 mouse_genomes_project 11 49897846 49905464 + Hnrnph1 protein_coding processed_transcript MGP_LPJ_T0028783.1 MGP_LPJ_G0018157.1 mouse_genomes_project 11 49902487 49903801 + Hnrnph1 protein_coding processed_transcript MGP_LPJ_T0028784.1 MGP_LPJ_G0018157.1 mouse_genomes_project 11 49902627 49903574 + Hnrnph1 protein_coding processed_transcript MGP_LPJ_T0028785.1 MGP_LPJ_G0018157.1 mouse_genomes_project 11 49902782 49903461 + Hnrnph1 protein_coding processed_transcript MGP_LPJ_T0028786.1 MGP_LPJ_G0018157.1 mouse_genomes_project 11 49903352 49904234 + Hnrnph1 protein_coding processed_transcript MGP_LPJ_T0033660.1 MGP_LPJ_G0019344.1 mouse_genomes_project 11 121359405 121362557 - MGP_LPJ_P0033660 Srsf2 protein_coding protein_coding MGP_LPJ_T0033661.1 MGP_LPJ_G0019344.1 mouse_genomes_project 11 121359408 121361696 - Srsf2 protein_coding retained_intron MGP_LPJ_T0033662.1 MGP_LPJ_G0019344.1 mouse_genomes_project 11 121359410 121361563 - MGP_LPJ_P0033662 Srsf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0033663.1 MGP_LPJ_G0019344.1 mouse_genomes_project 11 121359548 121362535 - MGP_LPJ_P0033663 Srsf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0033664.1 MGP_LPJ_G0019344.1 mouse_genomes_project 11 121359556 121362535 - MGP_LPJ_P0033664 Srsf2 protein_coding protein_coding MGP_LPJ_T0033665.1 MGP_LPJ_G0019344.1 mouse_genomes_project 11 121359610 121361048 - Srsf2 protein_coding processed_transcript MGP_LPJ_T0006380.1 MGP_LPJ_G0005317.1 mouse_genomes_project 11 118507188 118529352 - Gm11690 lincRNA lincRNA MGP_LPJ_T0003203.1 MGP_LPJ_G0002972.1 mouse_genomes_project 11 60224136 60229172 - Gm12264 antisense antisense MGP_LPJ_T0029087.1 MGP_LPJ_G0018235.1 mouse_genomes_project 11 55061573 55076407 + MGP_LPJ_P0029087 Gm2a protein_coding protein_coding MGP_LPJ_T0012535.1 MGP_LPJ_G0010626.1 mouse_genomes_project 11 27592092 27592297 - processed_pseudogene processed_pseudogene MGP_LPJ_T0031823.1 MGP_LPJ_G0018915.1 mouse_genomes_project 11 99636095 99646068 - MGP_LPJ_P0031823 Snx11 protein_coding protein_coding MGP_LPJ_T0031824.1 MGP_LPJ_G0018915.1 mouse_genomes_project 11 99636417 99646096 - MGP_LPJ_P0031824 Snx11 protein_coding protein_coding MGP_LPJ_T0031825.1 MGP_LPJ_G0018915.1 mouse_genomes_project 11 99638431 99646029 - MGP_LPJ_P0031825 Snx11 protein_coding protein_coding MGP_LPJ_T0031826.1 MGP_LPJ_G0018915.1 mouse_genomes_project 11 99638638 99639591 - Snx11 protein_coding processed_transcript MGP_LPJ_T0031827.1 MGP_LPJ_G0018915.1 mouse_genomes_project 11 99641077 99643178 - Snx11 protein_coding processed_transcript MGP_LPJ_T0031828.1 MGP_LPJ_G0018915.1 mouse_genomes_project 11 99644836 99646057 - Snx11 protein_coding processed_transcript MGP_LPJ_T0029233.1 MGP_LPJ_G0018297.1 mouse_genomes_project 11 59566882 59575240 - MGP_LPJ_P0029233 Iba57 protein_coding protein_coding MGP_LPJ_T0029234.1 MGP_LPJ_G0018297.1 mouse_genomes_project 11 59572621 59574818 - MGP_LPJ_P0029234 Iba57 protein_coding protein_coding MGP_LPJ_T0029235.1 MGP_LPJ_G0018297.1 mouse_genomes_project 11 59572853 59575201 - MGP_LPJ_P0029235 Iba57 protein_coding protein_coding MGP_LPJ_T0029508.1 MGP_LPJ_G0018356.1 mouse_genomes_project 11 62324850 62406047 - MGP_LPJ_P0029508 Ulk2 protein_coding protein_coding MGP_LPJ_T0029509.1 MGP_LPJ_G0018356.1 mouse_genomes_project 11 62326703 62405476 - Ulk2 protein_coding processed_transcript MGP_LPJ_T0029510.1 MGP_LPJ_G0018356.1 mouse_genomes_project 11 62349847 62353968 - Ulk2 protein_coding processed_transcript MGP_LPJ_T0029112.1 MGP_LPJ_G0018244.1 mouse_genomes_project 11 56056318 56075447 - MGP_LPJ_P0029112 Nmur2 protein_coding protein_coding MGP_LPJ_T0030482.1 MGP_LPJ_G0018572.1 mouse_genomes_project 11 74799365 74800304 - MGP_LPJ_P0030482 Olfr385 protein_coding protein_coding MGP_LPJ_T0101761.1 MGP_LPJ_G0039799.1 mouse_genomes_project 11 50533058 50534059 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0100143.1 MGP_LPJ_G0038406.1 mouse_genomes_project 11 48073171 48073252 + Snord96a snoRNA snoRNA MGP_LPJ_T0003271.1 MGP_LPJ_G0003027.1 mouse_genomes_project 11 88239737 88249512 + Brip1os antisense antisense MGP_LPJ_T0003272.1 MGP_LPJ_G0003027.1 mouse_genomes_project 11 88239750 88345715 + Brip1os antisense antisense MGP_LPJ_T0033261.1 MGP_LPJ_G0019267.1 mouse_genomes_project 11 119288663 119301233 - MGP_LPJ_P0033261 Cd300lb protein_coding protein_coding MGP_LPJ_T0033262.1 MGP_LPJ_G0019267.1 mouse_genomes_project 11 119288663 119301218 - MGP_LPJ_P0033262 Cd300lb protein_coding protein_coding MGP_LPJ_T0033263.1 MGP_LPJ_G0019267.1 mouse_genomes_project 11 119295334 119301134 - Cd300lb protein_coding processed_transcript MGP_LPJ_T0098124.1 MGP_LPJ_G0036405.1 mouse_genomes_project 11 88451618 88451738 + Gm23667 rRNA rRNA MGP_LPJ_T0027779.1 MGP_LPJ_G0017904.1 mouse_genomes_project 11 2149727 2160733 - Gas2l1 protein_coding processed_transcript MGP_LPJ_T0027780.1 MGP_LPJ_G0017904.1 mouse_genomes_project 11 2150847 2160739 - MGP_LPJ_P0027780 Gas2l1 protein_coding protein_coding MGP_LPJ_T0027783.1 MGP_LPJ_G0017904.1 mouse_genomes_project 11 2155820 2160766 - MGP_LPJ_P0027783 Gas2l1 protein_coding protein_coding MGP_LPJ_T0027784.1 MGP_LPJ_G0017904.1 mouse_genomes_project 11 2155829 2160716 - MGP_LPJ_P0027784 Gas2l1 protein_coding protein_coding MGP_LPJ_T0027785.1 MGP_LPJ_G0017904.1 mouse_genomes_project 11 2155918 2160291 - Gas2l1 protein_coding processed_transcript MGP_LPJ_T0027786.1 MGP_LPJ_G0017904.1 mouse_genomes_project 11 2159312 2160717 - MGP_LPJ_P0027786 Gas2l1 protein_coding protein_coding MGP_LPJ_T0027787.1 MGP_LPJ_G0017904.1 mouse_genomes_project 11 2159856 2160733 - Gas2l1 protein_coding processed_transcript MGP_LPJ_T0027838.1 MGP_LPJ_G0017915.1 mouse_genomes_project 11 2869044 2899006 - MGP_LPJ_P0027838 Urgcp protein_coding protein_coding MGP_LPJ_T0027839.1 MGP_LPJ_G0017915.1 mouse_genomes_project 11 2871396 2899042 - MGP_LPJ_P0027839 Urgcp protein_coding protein_coding MGP_LPJ_T0029731.1 MGP_LPJ_G0018407.1 mouse_genomes_project 11 69352181 69418811 + MGP_LPJ_P0029731 Pik3r5 protein_coding protein_coding MGP_LPJ_T0029732.1 MGP_LPJ_G0018407.1 mouse_genomes_project 11 69352185 69397707 + Pik3r5 protein_coding processed_transcript MGP_LPJ_T0029733.1 MGP_LPJ_G0018407.1 mouse_genomes_project 11 69352220 69360434 + Pik3r5 protein_coding processed_transcript MGP_LPJ_T0029734.1 MGP_LPJ_G0018407.1 mouse_genomes_project 11 69394737 69417223 + Pik3r5 protein_coding processed_transcript MGP_LPJ_T0029735.1 MGP_LPJ_G0018407.1 mouse_genomes_project 11 69396423 69414286 + Pik3r5 protein_coding processed_transcript MGP_LPJ_T0029691.1 MGP_LPJ_G0018397.1 mouse_genomes_project 11 68172835 68224459 + MGP_LPJ_P0029691 Myh13 protein_coding protein_coding MGP_LPJ_T0029692.1 MGP_LPJ_G0018397.1 mouse_genomes_project 11 68172957 68224459 + MGP_LPJ_P0029692 Myh13 protein_coding protein_coding MGP_LPJ_T0029693.1 MGP_LPJ_G0018397.1 mouse_genomes_project 11 68179055 68224375 + MGP_LPJ_P0029693 Myh13 protein_coding protein_coding MGP_LPJ_T0029694.1 MGP_LPJ_G0018397.1 mouse_genomes_project 11 68217716 68222077 + MGP_LPJ_P0029694 Myh13 protein_coding protein_coding MGP_LPJ_T0009736.1 MGP_LPJ_G0007854.1 mouse_genomes_project 11 81341758 81341824 + Mir193a miRNA miRNA MGP_LPJ_T0030783.1 MGP_LPJ_G0018651.1 mouse_genomes_project 11 78962859 78977068 + MGP_LPJ_P0030783 Git1 protein_coding protein_coding MGP_LPJ_T0030784.1 MGP_LPJ_G0018651.1 mouse_genomes_project 11 78962868 78977068 + MGP_LPJ_P0030784 Git1 protein_coding protein_coding MGP_LPJ_T0030785.1 MGP_LPJ_G0018651.1 mouse_genomes_project 11 78968385 78972397 + Git1 protein_coding retained_intron MGP_LPJ_T0030786.1 MGP_LPJ_G0018651.1 mouse_genomes_project 11 78970269 78974367 + Git1 protein_coding retained_intron MGP_LPJ_T0030787.1 MGP_LPJ_G0018651.1 mouse_genomes_project 11 78971760 78974114 + Git1 protein_coding retained_intron MGP_LPJ_T0030788.1 MGP_LPJ_G0018651.1 mouse_genomes_project 11 78974417 78975321 + Git1 protein_coding retained_intron MGP_LPJ_T0030158.1 MGP_LPJ_G0018497.1 mouse_genomes_project 11 71443798 71452006 - MGP_LPJ_P0030158 Alox15 protein_coding protein_coding MGP_LPJ_T0030159.1 MGP_LPJ_G0018497.1 mouse_genomes_project 11 71443860 71444952 - Alox15 protein_coding processed_transcript MGP_LPJ_T0033886.1 MGP_LPJ_G0019391.1 mouse_genomes_project 11 124682126 124741815 + MGP_LPJ_P0033886 Baiap2 protein_coding protein_coding MGP_LPJ_T0033887.1 MGP_LPJ_G0019391.1 mouse_genomes_project 11 124682126 124745976 + MGP_LPJ_P0033887 Baiap2 protein_coding protein_coding MGP_LPJ_T0033888.1 MGP_LPJ_G0019391.1 mouse_genomes_project 11 124682126 124745976 + MGP_LPJ_P0033888 Baiap2 protein_coding protein_coding MGP_LPJ_T0033889.1 MGP_LPJ_G0019391.1 mouse_genomes_project 11 124682126 124741815 + MGP_LPJ_P0033889 Baiap2 protein_coding protein_coding MGP_LPJ_T0033890.1 MGP_LPJ_G0019391.1 mouse_genomes_project 11 124682126 124741815 + MGP_LPJ_P0033890 Baiap2 protein_coding protein_coding MGP_LPJ_T0033891.1 MGP_LPJ_G0019391.1 mouse_genomes_project 11 124682479 124699904 + Baiap2 protein_coding processed_transcript MGP_LPJ_T0033892.1 MGP_LPJ_G0019391.1 mouse_genomes_project 11 124682835 124720616 + Baiap2 protein_coding processed_transcript MGP_LPJ_T0033893.1 MGP_LPJ_G0019391.1 mouse_genomes_project 11 124699392 124699759 + Baiap2 protein_coding processed_transcript MGP_LPJ_T0033894.1 MGP_LPJ_G0019391.1 mouse_genomes_project 11 124736863 124741393 + Baiap2 protein_coding processed_transcript MGP_LPJ_T0012505.1 MGP_LPJ_G0010596.1 mouse_genomes_project 11 18445222 18445752 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012760.1 MGP_LPJ_G0010851.1 mouse_genomes_project 11 115364525 115365357 + processed_pseudogene processed_pseudogene MGP_LPJ_T0033851.1 MGP_LPJ_G0019385.1 mouse_genomes_project 11 124060182 124092198 + MGP_LPJ_P0033851 Slc26a11 protein_coding protein_coding MGP_LPJ_T0033852.1 MGP_LPJ_G0019385.1 mouse_genomes_project 11 124060213 124067836 + Slc26a11 protein_coding processed_transcript MGP_LPJ_T0033853.1 MGP_LPJ_G0019385.1 mouse_genomes_project 11 124060218 124081002 + Slc26a11 protein_coding processed_transcript MGP_LPJ_T0033854.1 MGP_LPJ_G0019385.1 mouse_genomes_project 11 124068229 124092168 + Slc26a11 protein_coding processed_transcript MGP_LPJ_T0012682.1 MGP_LPJ_G0010773.1 mouse_genomes_project 11 81067102 81067609 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012600.1 MGP_LPJ_G0010691.1 mouse_genomes_project 11 53786722 53787121 - processed_pseudogene processed_pseudogene MGP_LPJ_T0028912.1 MGP_LPJ_G0018193.1 mouse_genomes_project 11 51979620 52011121 - MGP_LPJ_P0028912 Tcf7 protein_coding protein_coding MGP_LPJ_T0012492.1 MGP_LPJ_G0010583.1 mouse_genomes_project 11 15779996 15780528 - processed_pseudogene processed_pseudogene MGP_LPJ_T0031599.1 MGP_LPJ_G0018855.1 mouse_genomes_project 11 96847259 96858743 - MGP_LPJ_P0031599 Wfikkn2 protein_coding protein_coding MGP_LPJ_T0031600.1 MGP_LPJ_G0018855.1 mouse_genomes_project 11 96858482 96862024 - Wfikkn2 protein_coding processed_transcript MGP_LPJ_T0029155.1 MGP_LPJ_G0018260.1 mouse_genomes_project 11 58552027 58560263 - MGP_LPJ_P0029155 Zfp672 protein_coding protein_coding MGP_LPJ_T0029156.1 MGP_LPJ_G0018260.1 mouse_genomes_project 11 58552037 58560240 - MGP_LPJ_P0029156 Zfp672 protein_coding protein_coding MGP_LPJ_T0029157.1 MGP_LPJ_G0018260.1 mouse_genomes_project 11 58552128 58560030 - MGP_LPJ_P0029157 Zfp672 protein_coding protein_coding MGP_LPJ_T0029158.1 MGP_LPJ_G0018260.1 mouse_genomes_project 11 58554137 58567273 - MGP_LPJ_P0029158 Zfp672 protein_coding protein_coding MGP_LPJ_T0029159.1 MGP_LPJ_G0018260.1 mouse_genomes_project 11 58554239 58556879 - MGP_LPJ_P0029159 Zfp672 protein_coding protein_coding MGP_LPJ_T0029160.1 MGP_LPJ_G0018260.1 mouse_genomes_project 11 58556628 58560231 - Zfp672 protein_coding processed_transcript MGP_LPJ_T0029161.1 MGP_LPJ_G0018260.1 mouse_genomes_project 11 58556662 58560231 - Zfp672 protein_coding processed_transcript MGP_LPJ_T0029162.1 MGP_LPJ_G0018260.1 mouse_genomes_project 11 58564152 58567281 - Zfp672 protein_coding retained_intron MGP_LPJ_T0029163.1 MGP_LPJ_G0018260.1 mouse_genomes_project 11 58564657 58567281 - MGP_LPJ_P0029163 Zfp672 protein_coding protein_coding MGP_LPJ_T0031146.1 MGP_LPJ_G0018738.1 mouse_genomes_project 11 84709365 84745577 + MGP_LPJ_P0031146 Unc45b protein_coding protein_coding MGP_LPJ_T0031147.1 MGP_LPJ_G0018738.1 mouse_genomes_project 11 84710068 84745577 + MGP_LPJ_P0031147 Unc45b protein_coding protein_coding MGP_LPJ_T0031148.1 MGP_LPJ_G0018738.1 mouse_genomes_project 11 84710068 84745577 + MGP_LPJ_P0031148 Unc45b protein_coding protein_coding MGP_LPJ_T0031149.1 MGP_LPJ_G0018738.1 mouse_genomes_project 11 84727483 84728270 + Unc45b protein_coding processed_transcript MGP_LPJ_T0031150.1 MGP_LPJ_G0018738.1 mouse_genomes_project 11 84735713 84739821 + Unc45b protein_coding processed_transcript MGP_LPJ_T0012776.1 MGP_LPJ_G0010867.1 mouse_genomes_project 11 121676618 121677066 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012447.1 MGP_LPJ_G0010538.1 mouse_genomes_project 11 137892 138263 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098474.1 MGP_LPJ_G0036754.1 mouse_genomes_project 11 55479552 55479676 + Gm12238 sense_intronic sense_intronic MGP_LPJ_T0009748.1 MGP_LPJ_G0007866.1 mouse_genomes_project 11 99166365 99166475 + Mir10a miRNA miRNA MGP_LPJ_T0032513.1 MGP_LPJ_G0019112.1 mouse_genomes_project 11 105173922 105176699 + Dhx8 protein_coding retained_intron MGP_LPJ_T0032514.1 MGP_LPJ_G0019112.1 mouse_genomes_project 11 105173953 105209450 + MGP_LPJ_P0032514 Dhx8 protein_coding protein_coding MGP_LPJ_T0032515.1 MGP_LPJ_G0019112.1 mouse_genomes_project 11 105174032 105175441 + Dhx8 protein_coding retained_intron MGP_LPJ_T0032516.1 MGP_LPJ_G0019112.1 mouse_genomes_project 11 105174044 105208899 + MGP_LPJ_P0032516 Dhx8 protein_coding protein_coding MGP_LPJ_T0032517.1 MGP_LPJ_G0019112.1 mouse_genomes_project 11 105193550 105194946 + Dhx8 protein_coding retained_intron MGP_LPJ_T0006329.1 MGP_LPJ_G0005281.1 mouse_genomes_project 11 90975624 90979631 + C030037D09Rik lincRNA lincRNA MGP_LPJ_T0006330.1 MGP_LPJ_G0005281.1 mouse_genomes_project 11 90975783 90988456 + C030037D09Rik lincRNA lincRNA MGP_LPJ_T0006331.1 MGP_LPJ_G0005281.1 mouse_genomes_project 11 90977468 90981204 + C030037D09Rik lincRNA lincRNA MGP_LPJ_T0012462.1 MGP_LPJ_G0010553.1 mouse_genomes_project 11 3636332 3636663 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009679.1 MGP_LPJ_G0007797.1 mouse_genomes_project 11 34226801 34226911 + Mir218-2 miRNA miRNA MGP_LPJ_T0031524.1 MGP_LPJ_G0018837.1 mouse_genomes_project 11 91704688 91733559 - MGP_LPJ_P0031524 protein_coding protein_coding MGP_LPJ_T0012764.1 MGP_LPJ_G0010855.1 mouse_genomes_project 11 118033906 118034411 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003230.1 MGP_LPJ_G0002994.1 mouse_genomes_project 11 68033172 68036719 - 9430073C21Rik antisense antisense MGP_LPJ_T0030366.1 MGP_LPJ_G0018537.1 mouse_genomes_project 11 73333286 73335753 + MGP_LPJ_P0030366 Txndc17 protein_coding protein_coding MGP_LPJ_T0030367.1 MGP_LPJ_G0018537.1 mouse_genomes_project 11 73333354 73334415 + Txndc17 protein_coding retained_intron MGP_LPJ_T0003261.1 MGP_LPJ_G0003020.1 mouse_genomes_project 11 83123692 83145472 + 4930527B05Rik antisense antisense MGP_LPJ_T0030379.1 MGP_LPJ_G0018542.1 mouse_genomes_project 11 73465920 73485055 - MGP_LPJ_P0030379 Tekt1 protein_coding protein_coding MGP_LPJ_T0030380.1 MGP_LPJ_G0018542.1 mouse_genomes_project 11 73465920 73484490 - MGP_LPJ_P0030380 Tekt1 protein_coding protein_coding MGP_LPJ_T0030381.1 MGP_LPJ_G0018542.1 mouse_genomes_project 11 73465927 73485626 - MGP_LPJ_P0030381 Tekt1 protein_coding protein_coding MGP_LPJ_T0028401.1 MGP_LPJ_G0018045.1 mouse_genomes_project 11 30945085 31013829 + MGP_LPJ_P0028401 Ubtd2 protein_coding protein_coding MGP_LPJ_T0029223.1 MGP_LPJ_G0018296.1 mouse_genomes_project 11 59391638 59406966 - MGP_LPJ_P0029223 Obscn protein_coding unknown_likely_coding MGP_LPJ_T0029224.1 MGP_LPJ_G0018296.1 mouse_genomes_project 11 59391638 59406866 - MGP_LPJ_P0029224 Obscn protein_coding unknown_likely_coding MGP_LPJ_T0029225.1 MGP_LPJ_G0018296.1 mouse_genomes_project 11 59391642 59545748 - MGP_LPJ_P0029225 Obscn protein_coding protein_coding MGP_LPJ_T0029226.1 MGP_LPJ_G0018296.1 mouse_genomes_project 11 59391645 59431097 - MGP_LPJ_P0029226 Obscn protein_coding protein_coding MGP_LPJ_T0029227.1 MGP_LPJ_G0018296.1 mouse_genomes_project 11 59408147 59545775 - MGP_LPJ_P0029227 Obscn protein_coding protein_coding MGP_LPJ_T0029228.1 MGP_LPJ_G0018296.1 mouse_genomes_project 11 59408147 59545748 - MGP_LPJ_P0029228 Obscn protein_coding protein_coding MGP_LPJ_T0029229.1 MGP_LPJ_G0018296.1 mouse_genomes_project 11 59408147 59431070 - MGP_LPJ_P0029229 Obscn protein_coding nonsense_mediated_decay MGP_LPJ_T0029230.1 MGP_LPJ_G0018296.1 mouse_genomes_project 11 59408148 59425526 - MGP_LPJ_P0029230 Obscn protein_coding protein_coding MGP_LPJ_T0029231.1 MGP_LPJ_G0018296.1 mouse_genomes_project 11 59408662 59545748 - MGP_LPJ_P0029231 Obscn protein_coding unknown_likely_coding MGP_LPJ_T0029232.1 MGP_LPJ_G0018296.1 mouse_genomes_project 11 59471035 59477630 - MGP_LPJ_P0029232 Obscn protein_coding protein_coding MGP_LPJ_T0028497.1 MGP_LPJ_G0018074.1 mouse_genomes_project 11 40809011 40911694 - MGP_LPJ_P0028497 Gabrg2 protein_coding protein_coding MGP_LPJ_T0028498.1 MGP_LPJ_G0018074.1 mouse_genomes_project 11 40810501 40911368 - MGP_LPJ_P0028498 Gabrg2 protein_coding protein_coding MGP_LPJ_T0028499.1 MGP_LPJ_G0018074.1 mouse_genomes_project 11 40810503 40816377 - Gabrg2 protein_coding retained_intron MGP_LPJ_T0028500.1 MGP_LPJ_G0018074.1 mouse_genomes_project 11 40814323 40911192 - MGP_LPJ_P0028500 Gabrg2 protein_coding protein_coding MGP_LPJ_T0033582.1 MGP_LPJ_G0019329.1 mouse_genomes_project 11 120927543 120931794 + MGP_LPJ_P0033582 protein_coding protein_coding MGP_LPJ_T0012712.1 MGP_LPJ_G0010803.1 mouse_genomes_project 11 96217105 96218316 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003140.1 MGP_LPJ_G0002918.1 mouse_genomes_project 11 8956970 8980378 + Gm11998 antisense antisense MGP_LPJ_T0033738.1 MGP_LPJ_G0019358.1 mouse_genomes_project 11 122457369 122465023 + MGP_LPJ_P0033738 Birc5 protein_coding protein_coding MGP_LPJ_T0033739.1 MGP_LPJ_G0019358.1 mouse_genomes_project 11 122457437 122465034 + MGP_LPJ_P0033739 Birc5 protein_coding protein_coding MGP_LPJ_T0012500.1 MGP_LPJ_G0010591.1 mouse_genomes_project 11 17407640 17408472 + processed_pseudogene processed_pseudogene MGP_LPJ_T0029421.1 MGP_LPJ_G0018341.1 mouse_genomes_project 11 61648088 61674217 + MGP_LPJ_P0029421 Tnfrsf13b protein_coding protein_coding MGP_LPJ_T0029422.1 MGP_LPJ_G0018341.1 mouse_genomes_project 11 61648091 61671716 + MGP_LPJ_P0029422 Tnfrsf13b protein_coding protein_coding MGP_LPJ_T0029423.1 MGP_LPJ_G0018341.1 mouse_genomes_project 11 61648122 61671759 + MGP_LPJ_P0029423 Tnfrsf13b protein_coding protein_coding MGP_LPJ_T0029424.1 MGP_LPJ_G0018341.1 mouse_genomes_project 11 61665695 61672487 + MGP_LPJ_P0029424 Tnfrsf13b protein_coding protein_coding MGP_LPJ_T0029425.1 MGP_LPJ_G0018341.1 mouse_genomes_project 11 61667329 61672778 + Tnfrsf13b protein_coding processed_transcript MGP_LPJ_T0029426.1 MGP_LPJ_G0018341.1 mouse_genomes_project 11 61667367 61672651 + Tnfrsf13b protein_coding processed_transcript MGP_LPJ_T0029427.1 MGP_LPJ_G0018341.1 mouse_genomes_project 11 61667533 61672604 + Tnfrsf13b protein_coding processed_transcript MGP_LPJ_T0029824.1 MGP_LPJ_G0018426.1 mouse_genomes_project 11 70112360 70114892 - MGP_LPJ_P0029824 9130213A22Rik protein_coding protein_coding MGP_LPJ_T0030491.1 MGP_LPJ_G0018577.1 mouse_genomes_project 11 75007757 75012136 - MGP_LPJ_P0030491 Olfr391-ps protein_coding protein_coding MGP_LPJ_T0101794.1 MGP_LPJ_G0039832.1 mouse_genomes_project 11 103536436 103539677 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0031103.1 MGP_LPJ_G0018727.1 mouse_genomes_project 11 83878093 83879649 + MGP_LPJ_P0031103 Ccl12 protein_coding protein_coding MGP_LPJ_T0031104.1 MGP_LPJ_G0018727.1 mouse_genomes_project 11 83878100 83879616 + Ccl12 protein_coding processed_transcript MGP_LPJ_T0027718.1 MGP_LPJ_G0017890.1 mouse_genomes_project 11 1276123 1279368 + Osm protein_coding processed_transcript MGP_LPJ_T0027719.1 MGP_LPJ_G0017890.1 mouse_genomes_project 11 1276123 1280730 + MGP_LPJ_P0027719 Osm protein_coding protein_coding MGP_LPJ_T0003164.1 MGP_LPJ_G0002937.1 mouse_genomes_project 11 42201038 42263396 - Gm12146 antisense antisense MGP_LPJ_T0006227.1 MGP_LPJ_G0005200.1 mouse_genomes_project 11 27877934 27913747 - Gm12092 lincRNA lincRNA MGP_LPJ_T0003384.1 MGP_LPJ_G0003116.1 mouse_genomes_project 11 125440785 125443444 + Notumos antisense antisense MGP_LPJ_T0030842.1 MGP_LPJ_G0018662.1 mouse_genomes_project 11 79485646 79532410 + MGP_LPJ_P0030842 Phf12 protein_coding protein_coding MGP_LPJ_T0030843.1 MGP_LPJ_G0018662.1 mouse_genomes_project 11 79485694 79536735 + MGP_LPJ_P0030843 Phf12 protein_coding protein_coding MGP_LPJ_T0030844.1 MGP_LPJ_G0018662.1 mouse_genomes_project 11 79528463 79532388 + MGP_LPJ_P0030844 Phf12 protein_coding protein_coding MGP_LPJ_T0030845.1 MGP_LPJ_G0018662.1 mouse_genomes_project 11 79528677 79532157 + Phf12 protein_coding retained_intron MGP_LPJ_T0030846.1 MGP_LPJ_G0018662.1 mouse_genomes_project 11 79528711 79532378 + MGP_LPJ_P0030846 Phf12 protein_coding nonsense_mediated_decay MGP_LPJ_T0030847.1 MGP_LPJ_G0018662.1 mouse_genomes_project 11 79528778 79535043 + MGP_LPJ_P0030847 Phf12 protein_coding nonsense_mediated_decay MGP_LPJ_T0030848.1 MGP_LPJ_G0018662.1 mouse_genomes_project 11 79528801 79532212 + MGP_LPJ_P0030848 Phf12 protein_coding nonsense_mediated_decay MGP_LPJ_T0030849.1 MGP_LPJ_G0018662.1 mouse_genomes_project 11 79534305 79535773 + Phf12 protein_coding retained_intron MGP_LPJ_T0027587.1 MGP_LPJ_G0017864.1 mouse_genomes_project 11 244605 246035 + Patz1 protein_coding processed_transcript MGP_LPJ_T0027588.1 MGP_LPJ_G0017864.1 mouse_genomes_project 11 244898 264926 + Patz1 protein_coding processed_transcript MGP_LPJ_T0027589.1 MGP_LPJ_G0017864.1 mouse_genomes_project 11 244933 250932 + Patz1 protein_coding processed_transcript MGP_LPJ_T0027590.1 MGP_LPJ_G0017864.1 mouse_genomes_project 11 244985 264933 + MGP_LPJ_P0027590 Patz1 protein_coding protein_coding MGP_LPJ_T0027591.1 MGP_LPJ_G0017864.1 mouse_genomes_project 11 245012 264926 + MGP_LPJ_P0027591 Patz1 protein_coding protein_coding MGP_LPJ_T0027592.1 MGP_LPJ_G0017864.1 mouse_genomes_project 11 245835 251272 + MGP_LPJ_P0027592 Patz1 protein_coding protein_coding MGP_LPJ_T0027593.1 MGP_LPJ_G0017864.1 mouse_genomes_project 11 246281 264926 + MGP_LPJ_P0027593 Patz1 protein_coding protein_coding MGP_LPJ_T0027594.1 MGP_LPJ_G0017864.1 mouse_genomes_project 11 247301 263985 + Patz1 protein_coding processed_transcript MGP_LPJ_T0027595.1 MGP_LPJ_G0017864.1 mouse_genomes_project 11 248037 250511 + Patz1 protein_coding processed_transcript MGP_LPJ_T0027596.1 MGP_LPJ_G0017864.1 mouse_genomes_project 11 248710 250738 + Patz1 protein_coding processed_transcript MGP_LPJ_T0027597.1 MGP_LPJ_G0017864.1 mouse_genomes_project 11 254126 263510 + MGP_LPJ_P0027597 Patz1 protein_coding protein_coding MGP_LPJ_T0006359.1 MGP_LPJ_G0005301.1 mouse_genomes_project 11 106142345 106149446 - 2810433D01Rik lincRNA lincRNA MGP_LPJ_T0006360.1 MGP_LPJ_G0005301.1 mouse_genomes_project 11 106143690 106149396 - 2810433D01Rik lincRNA lincRNA MGP_LPJ_T0003310.1 MGP_LPJ_G0003056.1 mouse_genomes_project 11 102549875 102550652 + A830036E02Rik antisense antisense MGP_LPJ_T0003311.1 MGP_LPJ_G0003056.1 mouse_genomes_project 11 102550162 102555998 + A830036E02Rik antisense antisense MGP_LPJ_T0003312.1 MGP_LPJ_G0003056.1 mouse_genomes_project 11 102550167 102551195 + A830036E02Rik antisense antisense MGP_LPJ_T0003313.1 MGP_LPJ_G0003056.1 mouse_genomes_project 11 102552880 102558397 + A830036E02Rik antisense antisense MGP_LPJ_T0031763.1 MGP_LPJ_G0018895.1 mouse_genomes_project 11 98641870 98650414 + MGP_LPJ_P0031763 Gngt2 protein_coding protein_coding MGP_LPJ_T0031764.1 MGP_LPJ_G0018895.1 mouse_genomes_project 11 98646949 98650414 + MGP_LPJ_P0031764 Gngt2 protein_coding protein_coding MGP_LPJ_T0031765.1 MGP_LPJ_G0018895.1 mouse_genomes_project 11 98646963 98650414 + MGP_LPJ_P0031765 Gngt2 protein_coding protein_coding MGP_LPJ_T0031766.1 MGP_LPJ_G0018895.1 mouse_genomes_project 11 98647347 98650414 + MGP_LPJ_P0031766 Gngt2 protein_coding protein_coding MGP_LPJ_T0031767.1 MGP_LPJ_G0018895.1 mouse_genomes_project 11 98647349 98650414 + MGP_LPJ_P0031767 Gngt2 protein_coding protein_coding MGP_LPJ_T0031768.1 MGP_LPJ_G0018895.1 mouse_genomes_project 11 98647911 98650414 + MGP_LPJ_P0031768 Gngt2 protein_coding protein_coding MGP_LPJ_T0031769.1 MGP_LPJ_G0018895.1 mouse_genomes_project 11 98648288 98650414 + MGP_LPJ_P0031769 Gngt2 protein_coding protein_coding MGP_LPJ_T0011328.1 MGP_LPJ_G0009446.1 mouse_genomes_project 11 99039509 99039645 - Gm27605 misc_RNA misc_RNA MGP_LPJ_T0029880.1 MGP_LPJ_G0018440.1 mouse_genomes_project 11 70423907 70560711 - MGP_LPJ_P0029880 Dnah2 protein_coding protein_coding MGP_LPJ_T0029881.1 MGP_LPJ_G0018440.1 mouse_genomes_project 11 70423907 70565264 - MGP_LPJ_P0029881 Dnah2 protein_coding protein_coding MGP_LPJ_T0029882.1 MGP_LPJ_G0018440.1 mouse_genomes_project 11 70424091 70560697 - MGP_LPJ_P0029882 Dnah2 protein_coding unknown_likely_coding MGP_LPJ_T0029883.1 MGP_LPJ_G0018440.1 mouse_genomes_project 11 70470335 70471420 - Dnah2 protein_coding processed_transcript MGP_LPJ_T0029884.1 MGP_LPJ_G0018440.1 mouse_genomes_project 11 70522787 70565266 - Dnah2 protein_coding processed_transcript MGP_LPJ_T0029885.1 MGP_LPJ_G0018440.1 mouse_genomes_project 11 70528111 70528860 - Dnah2 protein_coding processed_transcript MGP_LPJ_T0031128.1 MGP_LPJ_G0018734.1 mouse_genomes_project 11 84597168 84665244 - MGP_LPJ_P0031128 Rffl protein_coding protein_coding MGP_LPJ_T0031129.1 MGP_LPJ_G0018734.1 mouse_genomes_project 11 84599354 84638518 - MGP_LPJ_P0031129 Rffl protein_coding protein_coding MGP_LPJ_T0031130.1 MGP_LPJ_G0018734.1 mouse_genomes_project 11 84600768 84621766 - MGP_LPJ_P0031130 Rffl protein_coding protein_coding MGP_LPJ_T0031131.1 MGP_LPJ_G0018734.1 mouse_genomes_project 11 84606015 84638762 - MGP_LPJ_P0031131 Rffl protein_coding protein_coding MGP_LPJ_T0027701.1 MGP_LPJ_G0017886.1 mouse_genomes_project 11 1177670 1184213 - Ccdc157 protein_coding processed_transcript MGP_LPJ_T0027702.1 MGP_LPJ_G0017886.1 mouse_genomes_project 11 1177670 1197931 - MGP_LPJ_P0027702 Ccdc157 protein_coding protein_coding MGP_LPJ_T0027703.1 MGP_LPJ_G0017886.1 mouse_genomes_project 11 1177670 1197933 - MGP_LPJ_P0027703 Ccdc157 protein_coding protein_coding MGP_LPJ_T0027704.1 MGP_LPJ_G0017886.1 mouse_genomes_project 11 1185361 1197858 - Ccdc157 protein_coding processed_transcript MGP_LPJ_T0027705.1 MGP_LPJ_G0017886.1 mouse_genomes_project 11 1186555 1197858 - Ccdc157 protein_coding processed_transcript MGP_LPJ_T0027706.1 MGP_LPJ_G0017886.1 mouse_genomes_project 11 1188038 1197892 - Ccdc157 protein_coding processed_transcript MGP_LPJ_T0009744.1 MGP_LPJ_G0007862.1 mouse_genomes_project 11 90587434 90587526 + Mir378b miRNA miRNA MGP_LPJ_T0101785.1 MGP_LPJ_G0039823.1 mouse_genomes_project 11 97443295 97444029 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0030676.1 MGP_LPJ_G0018628.1 mouse_genomes_project 11 77369108 77372766 + MGP_LPJ_P0030676 1700016K19Rik protein_coding protein_coding MGP_LPJ_T0031496.1 MGP_LPJ_G0018827.1 mouse_genomes_project 11 90519689 90520891 + MGP_LPJ_P0031496 Ccdc182 protein_coding protein_coding MGP_LPJ_T0031220.1 MGP_LPJ_G0018766.1 mouse_genomes_project 11 85868271 85892014 + MGP_LPJ_P0031220 Ddx52 protein_coding protein_coding MGP_LPJ_T0031221.1 MGP_LPJ_G0018766.1 mouse_genomes_project 11 85873063 85881136 + Ddx52 protein_coding processed_transcript MGP_LPJ_T0032318.1 MGP_LPJ_G0019071.1 mouse_genomes_project 11 104098019 104103599 - MGP_LPJ_P0032318 Ghdc protein_coding protein_coding MGP_LPJ_T0032319.1 MGP_LPJ_G0019071.1 mouse_genomes_project 11 104098898 104101296 - Ghdc protein_coding processed_transcript MGP_LPJ_T0032320.1 MGP_LPJ_G0019071.1 mouse_genomes_project 11 104102274 104103584 - MGP_LPJ_P0032320 Ghdc protein_coding protein_coding MGP_LPJ_T0003251.1 MGP_LPJ_G0003011.1 mouse_genomes_project 11 79805709 79806038 - Gm11192 antisense antisense MGP_LPJ_T0012471.1 MGP_LPJ_G0010562.1 mouse_genomes_project 11 5367022 5368756 - processed_pseudogene processed_pseudogene MGP_LPJ_T0031944.1 MGP_LPJ_G0018942.1 mouse_genomes_project 11 100680011 100711733 - MGP_LPJ_P0031944 Pip4k2b protein_coding protein_coding MGP_LPJ_T0031945.1 MGP_LPJ_G0018942.1 mouse_genomes_project 11 100685250 100692053 - Pip4k2b protein_coding processed_transcript MGP_LPJ_T0098930.1 MGP_LPJ_G0037193.1 mouse_genomes_project 11 88480455 88480561 - Gm26439 snRNA snRNA MGP_LPJ_T0031809.1 MGP_LPJ_G0018912.1 mouse_genomes_project 11 99199532 99202668 + Hoxb2 protein_coding retained_intron MGP_LPJ_T0031810.1 MGP_LPJ_G0018912.1 mouse_genomes_project 11 99200638 99203022 + MGP_LPJ_P0031810 Hoxb2 protein_coding protein_coding MGP_LPJ_T0006398.1 MGP_LPJ_G0005331.1 mouse_genomes_project 11 123795160 123810532 - Gm11755 lincRNA lincRNA MGP_LPJ_T0098885.1 MGP_LPJ_G0037148.1 mouse_genomes_project 11 9477861 9478017 - Gm24036 snRNA snRNA MGP_LPJ_T0028904.1 MGP_LPJ_G0018190.1 mouse_genomes_project 11 51803776 51833462 + MGP_LPJ_P0028904 Ppp2ca protein_coding protein_coding MGP_LPJ_T0028905.1 MGP_LPJ_G0018190.1 mouse_genomes_project 11 51824487 51825437 + Ppp2ca protein_coding retained_intron MGP_LPJ_T0028823.1 MGP_LPJ_G0018170.1 mouse_genomes_project 11 50583527 50588025 + MGP_LPJ_P0028823 Olfr51 protein_coding protein_coding MGP_LPJ_T0027788.1 MGP_LPJ_G0017906.1 mouse_genomes_project 11 2165129 2201048 - MGP_LPJ_P0027788 protein_coding protein_coding MGP_LPJ_T0027789.1 MGP_LPJ_G0017906.1 mouse_genomes_project 11 2165138 2200849 - MGP_LPJ_P0027789 protein_coding protein_coding MGP_LPJ_T0027790.1 MGP_LPJ_G0017906.1 mouse_genomes_project 11 2165336 2200824 - MGP_LPJ_P0027790 protein_coding protein_coding MGP_LPJ_T0027791.1 MGP_LPJ_G0017906.1 mouse_genomes_project 11 2165413 2166331 - protein_coding processed_transcript MGP_LPJ_T0027792.1 MGP_LPJ_G0017906.1 mouse_genomes_project 11 2167623 2178380 - protein_coding processed_transcript MGP_LPJ_T0027793.1 MGP_LPJ_G0017906.1 mouse_genomes_project 11 2167933 2177134 - protein_coding processed_transcript MGP_LPJ_T0027794.1 MGP_LPJ_G0017906.1 mouse_genomes_project 11 2168036 2178751 - protein_coding processed_transcript MGP_LPJ_T0027795.1 MGP_LPJ_G0017906.1 mouse_genomes_project 11 2168036 2181192 - protein_coding processed_transcript MGP_LPJ_T0027796.1 MGP_LPJ_G0017906.1 mouse_genomes_project 11 2179269 2200848 - MGP_LPJ_P0027796 protein_coding protein_coding MGP_LPJ_T0027797.1 MGP_LPJ_G0017906.1 mouse_genomes_project 11 2180873 2186703 - protein_coding processed_transcript MGP_LPJ_T0027798.1 MGP_LPJ_G0017906.1 mouse_genomes_project 11 2191129 2200878 - MGP_LPJ_P0027798 protein_coding protein_coding MGP_LPJ_T0027799.1 MGP_LPJ_G0017906.1 mouse_genomes_project 11 2194202 2200849 - protein_coding processed_transcript MGP_LPJ_T0098900.1 MGP_LPJ_G0037163.1 mouse_genomes_project 11 39921982 39922138 - Gm24446 snRNA snRNA MGP_LPJ_T0032934.1 MGP_LPJ_G0019196.1 mouse_genomes_project 11 109883442 109887329 - MGP_LPJ_P0032934 Limd2 protein_coding protein_coding MGP_LPJ_T0032935.1 MGP_LPJ_G0019196.1 mouse_genomes_project 11 109885500 109886596 - Limd2 protein_coding processed_transcript MGP_LPJ_T0032936.1 MGP_LPJ_G0019196.1 mouse_genomes_project 11 109885617 109887114 - MGP_LPJ_P0032936 Limd2 protein_coding protein_coding MGP_LPJ_T0032937.1 MGP_LPJ_G0019196.1 mouse_genomes_project 11 109885837 109888047 - MGP_LPJ_P0032937 Limd2 protein_coding protein_coding MGP_LPJ_T0100150.1 MGP_LPJ_G0038413.1 mouse_genomes_project 11 63205917 63205989 + Snord49b snoRNA snoRNA MGP_LPJ_T0031043.1 MGP_LPJ_G0018710.1 mouse_genomes_project 11 81817031 81841806 + MGP_LPJ_P0031043 Adap2 protein_coding protein_coding MGP_LPJ_T0031044.1 MGP_LPJ_G0018710.1 mouse_genomes_project 11 81817042 81828701 + MGP_LPJ_P0031044 Adap2 protein_coding nonsense_mediated_decay MGP_LPJ_T0003276.1 MGP_LPJ_G0003030.1 mouse_genomes_project 11 90195514 90244572 - Gm11508 antisense antisense MGP_LPJ_T0009690.1 MGP_LPJ_G0007808.1 mouse_genomes_project 11 49877460 49877555 - Mir804 miRNA miRNA MGP_LPJ_T0027844.1 MGP_LPJ_G0017918.1 mouse_genomes_project 11 2989749 2999490 - MGP_LPJ_P0027844 Polm protein_coding protein_coding MGP_LPJ_T0027845.1 MGP_LPJ_G0017918.1 mouse_genomes_project 11 2989750 2999717 - MGP_LPJ_P0027845 Polm protein_coding protein_coding MGP_LPJ_T0027846.1 MGP_LPJ_G0017918.1 mouse_genomes_project 11 2991104 2992090 - Polm protein_coding processed_transcript MGP_LPJ_T0027847.1 MGP_LPJ_G0017918.1 mouse_genomes_project 11 2996500 2998187 - Polm protein_coding processed_transcript MGP_LPJ_T0027848.1 MGP_LPJ_G0017918.1 mouse_genomes_project 11 2997979 2999453 - Polm protein_coding processed_transcript MGP_LPJ_T0027849.1 MGP_LPJ_G0017918.1 mouse_genomes_project 11 2998002 2999494 - Polm protein_coding processed_transcript MGP_LPJ_T0003152.1 MGP_LPJ_G0002926.1 mouse_genomes_project 11 21758743 21759672 + Gm12061 antisense antisense MGP_LPJ_T0006301.1 MGP_LPJ_G0005263.1 mouse_genomes_project 11 78959151 78960707 + 2210008F06Rik lincRNA lincRNA MGP_LPJ_T0012649.1 MGP_LPJ_G0010740.1 mouse_genomes_project 11 71214930 71215304 - processed_pseudogene processed_pseudogene MGP_LPJ_T0029535.1 MGP_LPJ_G0018361.1 mouse_genomes_project 11 62857939 62859055 + Ttc19 protein_coding processed_transcript MGP_LPJ_T0029536.1 MGP_LPJ_G0018361.1 mouse_genomes_project 11 62857948 62893883 + MGP_LPJ_P0029536 Ttc19 protein_coding protein_coding MGP_LPJ_T0029537.1 MGP_LPJ_G0018361.1 mouse_genomes_project 11 62857950 62895063 + MGP_LPJ_P0029537 Ttc19 protein_coding protein_coding MGP_LPJ_T0029538.1 MGP_LPJ_G0018361.1 mouse_genomes_project 11 62860150 62906571 + MGP_LPJ_P0029538 Ttc19 protein_coding protein_coding MGP_LPJ_T0029539.1 MGP_LPJ_G0018361.1 mouse_genomes_project 11 62888122 62906833 + Ttc19 protein_coding processed_transcript MGP_LPJ_T0029172.1 MGP_LPJ_G0018264.1 mouse_genomes_project 11 58688438 58697521 + MGP_LPJ_P0029172 Gm12253 protein_coding protein_coding MGP_LPJ_T0098478.1 MGP_LPJ_G0036758.1 mouse_genomes_project 11 89822133 89825934 + 1110028F11Rik sense_intronic sense_intronic MGP_LPJ_T0098479.1 MGP_LPJ_G0036758.1 mouse_genomes_project 11 89822860 89825592 + 1110028F11Rik sense_intronic sense_intronic MGP_LPJ_T0009662.1 MGP_LPJ_G0007780.1 mouse_genomes_project 11 1175911 1175994 + Mir3060 miRNA miRNA MGP_LPJ_T0031654.1 MGP_LPJ_G0018864.1 mouse_genomes_project 11 97187701 97197229 - Rsad1 protein_coding processed_transcript MGP_LPJ_T0031655.1 MGP_LPJ_G0018864.1 mouse_genomes_project 11 97187701 97197173 - MGP_LPJ_P0031655 Rsad1 protein_coding protein_coding MGP_LPJ_T0031656.1 MGP_LPJ_G0018864.1 mouse_genomes_project 11 97192503 97196766 - Rsad1 protein_coding processed_transcript MGP_LPJ_T0031657.1 MGP_LPJ_G0018864.1 mouse_genomes_project 11 97192568 97196576 - Rsad1 protein_coding processed_transcript MGP_LPJ_T0027901.1 MGP_LPJ_G0017931.1 mouse_genomes_project 11 3578611 3595675 + MGP_LPJ_P0027901 Zmiz2 protein_coding protein_coding MGP_LPJ_T0027902.1 MGP_LPJ_G0017931.1 mouse_genomes_project 11 3578901 3595675 + MGP_LPJ_P0027902 Zmiz2 protein_coding protein_coding MGP_LPJ_T0027903.1 MGP_LPJ_G0017931.1 mouse_genomes_project 11 3579008 3595675 + MGP_LPJ_P0027903 Zmiz2 protein_coding protein_coding MGP_LPJ_T0027904.1 MGP_LPJ_G0017931.1 mouse_genomes_project 11 3584709 3595591 + MGP_LPJ_P0027904 Zmiz2 protein_coding protein_coding MGP_LPJ_T0027905.1 MGP_LPJ_G0017931.1 mouse_genomes_project 11 3585126 3595447 + MGP_LPJ_P0027905 Zmiz2 protein_coding protein_coding MGP_LPJ_T0027906.1 MGP_LPJ_G0017931.1 mouse_genomes_project 11 3586250 3587370 + Zmiz2 protein_coding retained_intron MGP_LPJ_T0029742.1 MGP_LPJ_G0018410.1 mouse_genomes_project 11 69514255 69528071 + MGP_LPJ_P0029742 Ccdc42 protein_coding protein_coding MGP_LPJ_T0029743.1 MGP_LPJ_G0018410.1 mouse_genomes_project 11 69521081 69528308 + MGP_LPJ_P0029743 Ccdc42 protein_coding protein_coding MGP_LPJ_T0030801.1 MGP_LPJ_G0018657.1 mouse_genomes_project 11 79211774 79214974 - Cryba1 protein_coding retained_intron MGP_LPJ_T0030802.1 MGP_LPJ_G0018657.1 mouse_genomes_project 11 79211786 79218423 - MGP_LPJ_P0030802 Cryba1 protein_coding protein_coding MGP_LPJ_T0031217.1 MGP_LPJ_G0018765.1 mouse_genomes_project 11 85776302 85832083 + MGP_LPJ_P0031217 Hnf1b protein_coding protein_coding MGP_LPJ_T0031218.1 MGP_LPJ_G0018765.1 mouse_genomes_project 11 85776477 85831198 + MGP_LPJ_P0031218 Hnf1b protein_coding protein_coding MGP_LPJ_T0031219.1 MGP_LPJ_G0018765.1 mouse_genomes_project 11 85777670 85790704 + MGP_LPJ_P0031219 Hnf1b protein_coding protein_coding MGP_LPJ_T0012617.1 MGP_LPJ_G0010708.1 mouse_genomes_project 11 58815162 58815446 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100173.1 MGP_LPJ_G0038436.1 mouse_genomes_project 11 95434440 95434582 + Gm25113 snoRNA snoRNA MGP_LPJ_T0012742.1 MGP_LPJ_G0010833.1 mouse_genomes_project 11 107477609 107477938 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098112.1 MGP_LPJ_G0036393.1 mouse_genomes_project 11 8519437 8519567 + Gm23065 rRNA rRNA MGP_LPJ_T0030612.1 MGP_LPJ_G0018615.1 mouse_genomes_project 11 76773593 76788926 - MGP_LPJ_P0030612 Wdr81 protein_coding protein_coding MGP_LPJ_T0030613.1 MGP_LPJ_G0018615.1 mouse_genomes_project 11 76773597 76785570 - MGP_LPJ_P0030613 Wdr81 protein_coding protein_coding MGP_LPJ_T0030614.1 MGP_LPJ_G0018615.1 mouse_genomes_project 11 76780814 76782428 - Wdr81 protein_coding processed_transcript MGP_LPJ_T0031138.1 MGP_LPJ_G0018736.1 mouse_genomes_project 11 84689974 84699551 + MGP_LPJ_P0031138 Fndc8 protein_coding protein_coding MGP_LPJ_T0031007.1 MGP_LPJ_G0018701.1 mouse_genomes_project 11 81130401 81150748 - MGP_LPJ_P0031007 Gm21975 protein_coding protein_coding MGP_LPJ_T0031008.1 MGP_LPJ_G0018701.1 mouse_genomes_project 11 81130401 81150718 - MGP_LPJ_P0031008 Gm21975 protein_coding nonsense_mediated_decay MGP_LPJ_T0027823.1 MGP_LPJ_G0017911.1 mouse_genomes_project 11 2658151 2663427 + MGP_LPJ_P0027823 Xbp1 protein_coding protein_coding MGP_LPJ_T0027824.1 MGP_LPJ_G0017911.1 mouse_genomes_project 11 2658497 2661536 + Xbp1 protein_coding retained_intron MGP_LPJ_T0027825.1 MGP_LPJ_G0017911.1 mouse_genomes_project 11 2659154 2662453 + MGP_LPJ_P0027825 Xbp1 protein_coding protein_coding MGP_LPJ_T0027826.1 MGP_LPJ_G0017911.1 mouse_genomes_project 11 2659414 2662615 + MGP_LPJ_P0027826 Xbp1 protein_coding protein_coding MGP_LPJ_T0012499.1 MGP_LPJ_G0010590.1 mouse_genomes_project 11 17369297 17369924 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098127.1 MGP_LPJ_G0036408.1 mouse_genomes_project 11 111726437 111726549 + Gm27595 rRNA rRNA MGP_LPJ_T0003225.1 MGP_LPJ_G0002990.1 mouse_genomes_project 11 64634945 64638760 + 9630013K17Rik antisense antisense MGP_LPJ_T0029127.1 MGP_LPJ_G0018249.1 mouse_genomes_project 11 57948285 57970727 + MGP_LPJ_P0029127 Sap30l protein_coding protein_coding MGP_LPJ_T0031327.1 MGP_LPJ_G0018787.1 mouse_genomes_project 11 87875197 87882641 - MGP_LPJ_P0031327 Gm11444 protein_coding protein_coding MGP_LPJ_T0027828.1 MGP_LPJ_G0017913.1 mouse_genomes_project 11 2704363 2846688 + MGP_LPJ_P0027828 Ankrd36 protein_coding protein_coding MGP_LPJ_T0027829.1 MGP_LPJ_G0017913.1 mouse_genomes_project 11 2704376 2718968 + MGP_LPJ_P0027829 Ankrd36 protein_coding protein_coding MGP_LPJ_T0027830.1 MGP_LPJ_G0017913.1 mouse_genomes_project 11 2704496 2813360 + MGP_LPJ_P0027830 Ankrd36 protein_coding protein_coding MGP_LPJ_T0027831.1 MGP_LPJ_G0017913.1 mouse_genomes_project 11 2708766 2718818 + Ankrd36 protein_coding processed_transcript MGP_LPJ_T0027832.1 MGP_LPJ_G0017913.1 mouse_genomes_project 11 2767417 2790336 + MGP_LPJ_P0027832 Ankrd36 protein_coding protein_coding MGP_LPJ_T0017147.1 MGP_LPJ_G0015094.1 mouse_genomes_project 11 70334597 70338419 + processed_transcript processed_transcript MGP_LPJ_T0017148.1 MGP_LPJ_G0015094.1 mouse_genomes_project 11 70334945 70335889 + processed_transcript processed_transcript MGP_LPJ_T0012480.1 MGP_LPJ_G0010571.1 mouse_genomes_project 11 11940712 11941115 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009774.1 MGP_LPJ_G0007892.1 mouse_genomes_project 11 111499660 111499718 + Mir6932 miRNA miRNA MGP_LPJ_T0030700.1 MGP_LPJ_G0018633.1 mouse_genomes_project 11 77607088 77615193 - MGP_LPJ_P0030700 Gemin4 protein_coding protein_coding MGP_LPJ_T0030701.1 MGP_LPJ_G0018633.1 mouse_genomes_project 11 77614607 77615046 - MGP_LPJ_P0030701 Gemin4 protein_coding nonsense_mediated_decay MGP_LPJ_T0012479.1 MGP_LPJ_G0010570.1 mouse_genomes_project 11 11605004 11605383 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003342.1 MGP_LPJ_G0003083.1 mouse_genomes_project 11 111177640 111184395 + Gm11716 antisense antisense MGP_LPJ_T0027960.1 MGP_LPJ_G0017946.1 mouse_genomes_project 11 6096098 6238716 - MGP_LPJ_P0027960 Pkd1l1 protein_coding protein_coding MGP_LPJ_T0027961.1 MGP_LPJ_G0017946.1 mouse_genomes_project 11 6113958 6130794 - Pkd1l1 protein_coding processed_transcript MGP_LPJ_T0006271.1 MGP_LPJ_G0005239.1 mouse_genomes_project 11 62416564 62418718 + Gm26964 lincRNA lincRNA MGP_LPJ_T0012613.1 MGP_LPJ_G0010704.1 mouse_genomes_project 11 58131747 58132100 - processed_pseudogene processed_pseudogene MGP_LPJ_T0028062.1 MGP_LPJ_G0017970.1 mouse_genomes_project 11 15515092 15530206 - MGP_LPJ_P0028062 Etaa1 protein_coding protein_coding MGP_LPJ_T0012591.1 MGP_LPJ_G0010682.1 mouse_genomes_project 11 51892252 51892405 + processed_pseudogene processed_pseudogene MGP_LPJ_T0028750.1 MGP_LPJ_G0018151.1 mouse_genomes_project 11 49699153 49710549 - MGP_LPJ_P0028750 Sqstm1 protein_coding protein_coding MGP_LPJ_T0028751.1 MGP_LPJ_G0018151.1 mouse_genomes_project 11 49699939 49710585 - MGP_LPJ_P0028751 Sqstm1 protein_coding protein_coding MGP_LPJ_T0028752.1 MGP_LPJ_G0018151.1 mouse_genomes_project 11 49699954 49702742 - MGP_LPJ_P0028752 Sqstm1 protein_coding protein_coding MGP_LPJ_T0028753.1 MGP_LPJ_G0018151.1 mouse_genomes_project 11 49700398 49710523 - MGP_LPJ_P0028753 Sqstm1 protein_coding protein_coding MGP_LPJ_T0028754.1 MGP_LPJ_G0018151.1 mouse_genomes_project 11 49702099 49705861 - Sqstm1 protein_coding retained_intron MGP_LPJ_T0028755.1 MGP_LPJ_G0018151.1 mouse_genomes_project 11 49702230 49702906 - Sqstm1 protein_coding retained_intron MGP_LPJ_T0028756.1 MGP_LPJ_G0018151.1 mouse_genomes_project 11 49705439 49707080 - Sqstm1 protein_coding retained_intron MGP_LPJ_T0027757.1 MGP_LPJ_G0017900.1 mouse_genomes_project 11 1956186 1976789 + MGP_LPJ_P0027757 Nipsnap1 protein_coding protein_coding MGP_LPJ_T0027758.1 MGP_LPJ_G0017900.1 mouse_genomes_project 11 1956234 1976206 + MGP_LPJ_P0027758 Nipsnap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0027759.1 MGP_LPJ_G0017900.1 mouse_genomes_project 11 1956240 1967376 + Nipsnap1 protein_coding processed_transcript MGP_LPJ_T0027760.1 MGP_LPJ_G0017900.1 mouse_genomes_project 11 1966157 1971726 + MGP_LPJ_P0027760 Nipsnap1 protein_coding protein_coding MGP_LPJ_T0027761.1 MGP_LPJ_G0017900.1 mouse_genomes_project 11 1966169 1972568 + Nipsnap1 protein_coding processed_transcript MGP_LPJ_T0027762.1 MGP_LPJ_G0017900.1 mouse_genomes_project 11 1966227 1967088 + Nipsnap1 protein_coding processed_transcript MGP_LPJ_T0012457.1 MGP_LPJ_G0010548.1 mouse_genomes_project 11 2628403 2628658 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009669.1 MGP_LPJ_G0007787.1 mouse_genomes_project 11 19354433 19354528 - Gm22990 miRNA miRNA MGP_LPJ_T0009675.1 MGP_LPJ_G0007793.1 mouse_genomes_project 11 26991836 26991905 - Mir216c miRNA miRNA MGP_LPJ_T0003213.1 MGP_LPJ_G0002980.1 mouse_genomes_project 11 63117208 63117945 + Gm12949 antisense antisense MGP_LPJ_T0031795.1 MGP_LPJ_G0018906.1 mouse_genomes_project 11 99130337 99133756 + MGP_LPJ_P0031795 Hoxb8 protein_coding protein_coding MGP_LPJ_T0031796.1 MGP_LPJ_G0018906.1 mouse_genomes_project 11 99130988 99132756 + MGP_LPJ_P0031796 Hoxb8 protein_coding protein_coding MGP_LPJ_T0031797.1 MGP_LPJ_G0018906.1 mouse_genomes_project 11 99131157 99133134 + MGP_LPJ_P0031797 Hoxb8 protein_coding protein_coding MGP_LPJ_T0030959.1 MGP_LPJ_G0018688.1 mouse_genomes_project 11 80045559 80056689 + MGP_LPJ_P0030959 Poldip2 protein_coding protein_coding MGP_LPJ_T0030960.1 MGP_LPJ_G0018688.1 mouse_genomes_project 11 80045754 80047350 + Poldip2 protein_coding processed_transcript MGP_LPJ_T0030961.1 MGP_LPJ_G0018688.1 mouse_genomes_project 11 80045782 80056124 + MGP_LPJ_P0030961 Poldip2 protein_coding nonsense_mediated_decay MGP_LPJ_T0030962.1 MGP_LPJ_G0018688.1 mouse_genomes_project 11 80049598 80051891 + Poldip2 protein_coding retained_intron MGP_LPJ_T0030963.1 MGP_LPJ_G0018688.1 mouse_genomes_project 11 80050188 80052544 + Poldip2 protein_coding retained_intron MGP_LPJ_T0030964.1 MGP_LPJ_G0018688.1 mouse_genomes_project 11 80052289 80053220 + Poldip2 protein_coding retained_intron MGP_LPJ_T0029023.1 MGP_LPJ_G0018222.1 mouse_genomes_project 11 54165591 54168009 - MGP_LPJ_P0029023 Csf2 protein_coding protein_coding MGP_LPJ_T0032678.1 MGP_LPJ_G0019138.1 mouse_genomes_project 11 105956060 105972581 - MGP_LPJ_P0032678 Itga2b protein_coding protein_coding MGP_LPJ_T0032679.1 MGP_LPJ_G0019138.1 mouse_genomes_project 11 105956067 105958959 - Itga2b protein_coding processed_transcript MGP_LPJ_T0032680.1 MGP_LPJ_G0019138.1 mouse_genomes_project 11 105958607 105960075 - Itga2b protein_coding processed_transcript MGP_LPJ_T0032681.1 MGP_LPJ_G0019138.1 mouse_genomes_project 11 105958665 105961320 - Itga2b protein_coding processed_transcript MGP_LPJ_T0032682.1 MGP_LPJ_G0019138.1 mouse_genomes_project 11 105959240 105969897 - Itga2b protein_coding processed_transcript MGP_LPJ_T0032683.1 MGP_LPJ_G0019138.1 mouse_genomes_project 11 105959954 105961114 - Itga2b protein_coding processed_transcript MGP_LPJ_T0032684.1 MGP_LPJ_G0019138.1 mouse_genomes_project 11 105960264 105963590 - Itga2b protein_coding processed_transcript MGP_LPJ_T0032685.1 MGP_LPJ_G0019138.1 mouse_genomes_project 11 105963967 105964693 - Itga2b protein_coding processed_transcript MGP_LPJ_T0032686.1 MGP_LPJ_G0019138.1 mouse_genomes_project 11 105969045 105969653 - Itga2b protein_coding processed_transcript MGP_LPJ_T0032687.1 MGP_LPJ_G0019138.1 mouse_genomes_project 11 105970497 105972820 - Itga2b protein_coding processed_transcript MGP_LPJ_T0028495.1 MGP_LPJ_G0018073.1 mouse_genomes_project 11 39653823 39660583 - MGP_LPJ_P0028495 Ccng1 protein_coding protein_coding MGP_LPJ_T0028496.1 MGP_LPJ_G0018073.1 mouse_genomes_project 11 39654361 39659210 - Ccng1 protein_coding processed_transcript MGP_LPJ_T0032532.1 MGP_LPJ_G0019116.1 mouse_genomes_project 11 105429174 105445190 - MGP_LPJ_P0032532 Dusp3 protein_coding protein_coding MGP_LPJ_T0032533.1 MGP_LPJ_G0019116.1 mouse_genomes_project 11 105429174 105442978 - MGP_LPJ_P0032533 Dusp3 protein_coding protein_coding MGP_LPJ_T0032534.1 MGP_LPJ_G0019116.1 mouse_genomes_project 11 105429174 105441681 - MGP_LPJ_P0032534 Dusp3 protein_coding protein_coding MGP_LPJ_T0032535.1 MGP_LPJ_G0019116.1 mouse_genomes_project 11 105429174 105445190 - MGP_LPJ_P0032535 Dusp3 protein_coding protein_coding MGP_LPJ_T0032536.1 MGP_LPJ_G0019116.1 mouse_genomes_project 11 105431498 105439873 - MGP_LPJ_P0032536 Dusp3 protein_coding protein_coding MGP_LPJ_T0032537.1 MGP_LPJ_G0019116.1 mouse_genomes_project 11 105432745 105442957 - MGP_LPJ_P0032537 Dusp3 protein_coding protein_coding MGP_LPJ_T0032538.1 MGP_LPJ_G0019116.1 mouse_genomes_project 11 105438778 105442930 - MGP_LPJ_P0032538 Dusp3 protein_coding protein_coding MGP_LPJ_T0031364.1 MGP_LPJ_G0018795.1 mouse_genomes_project 11 88640245 88745763 - MGP_LPJ_P0031364 Vmp1 protein_coding protein_coding MGP_LPJ_T0031365.1 MGP_LPJ_G0018795.1 mouse_genomes_project 11 88641311 88659544 - Vmp1 protein_coding processed_transcript MGP_LPJ_T0031366.1 MGP_LPJ_G0018795.1 mouse_genomes_project 11 88641401 88643341 - Vmp1 protein_coding processed_transcript MGP_LPJ_T0031367.1 MGP_LPJ_G0018795.1 mouse_genomes_project 11 88641650 88643228 - Vmp1 protein_coding processed_transcript MGP_LPJ_T0031368.1 MGP_LPJ_G0018795.1 mouse_genomes_project 11 88641653 88659576 - Vmp1 protein_coding processed_transcript MGP_LPJ_T0031369.1 MGP_LPJ_G0018795.1 mouse_genomes_project 11 88702953 88725393 - Vmp1 protein_coding processed_transcript MGP_LPJ_T0031370.1 MGP_LPJ_G0018795.1 mouse_genomes_project 11 88726373 88745748 - Vmp1 protein_coding processed_transcript MGP_LPJ_T0031371.1 MGP_LPJ_G0018795.1 mouse_genomes_project 11 88726473 88732998 - MGP_LPJ_P0031371 Vmp1 protein_coding protein_coding MGP_LPJ_T0032415.1 MGP_LPJ_G0019091.1 mouse_genomes_project 11 104648667 104665570 + MGP_LPJ_P0032415 Wnk4 protein_coding nonsense_mediated_decay MGP_LPJ_T0032416.1 MGP_LPJ_G0019091.1 mouse_genomes_project 11 104648698 104665570 + MGP_LPJ_P0032416 Wnk4 protein_coding protein_coding MGP_LPJ_T0032417.1 MGP_LPJ_G0019091.1 mouse_genomes_project 11 104648755 104665435 + MGP_LPJ_P0032417 Wnk4 protein_coding nonsense_mediated_decay MGP_LPJ_T0032418.1 MGP_LPJ_G0019091.1 mouse_genomes_project 11 104653472 104662275 + MGP_LPJ_P0032418 Wnk4 protein_coding nonsense_mediated_decay MGP_LPJ_T0032419.1 MGP_LPJ_G0019091.1 mouse_genomes_project 11 104664806 104665567 + MGP_LPJ_P0032419 Wnk4 protein_coding protein_coding MGP_LPJ_T0012516.1 MGP_LPJ_G0010607.1 mouse_genomes_project 11 19752863 19753427 + processed_pseudogene processed_pseudogene MGP_LPJ_T0032808.1 MGP_LPJ_G0019164.1 mouse_genomes_project 11 106943362 106992234 - MGP_LPJ_P0032808 Plekhm1 protein_coding protein_coding MGP_LPJ_T0032809.1 MGP_LPJ_G0019164.1 mouse_genomes_project 11 106945574 106973687 - MGP_LPJ_P0032809 Plekhm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0017160.1 MGP_LPJ_G0015102.1 mouse_genomes_project 11 84723427 84733291 - Unc45bos processed_transcript processed_transcript MGP_LPJ_T0029476.1 MGP_LPJ_G0018350.1 mouse_genomes_project 11 62038280 62046289 + MGP_LPJ_P0029476 B9d1 protein_coding protein_coding MGP_LPJ_T0029477.1 MGP_LPJ_G0018350.1 mouse_genomes_project 11 62038339 62046289 + B9d1 protein_coding processed_transcript MGP_LPJ_T0029478.1 MGP_LPJ_G0018350.1 mouse_genomes_project 11 62038388 62041565 + B9d1 protein_coding processed_transcript MGP_LPJ_T0029479.1 MGP_LPJ_G0018350.1 mouse_genomes_project 11 62038391 62046289 + B9d1 protein_coding processed_transcript MGP_LPJ_T0029480.1 MGP_LPJ_G0018350.1 mouse_genomes_project 11 62042252 62046289 + MGP_LPJ_P0029480 B9d1 protein_coding protein_coding MGP_LPJ_T0029481.1 MGP_LPJ_G0018350.1 mouse_genomes_project 11 62045672 62046289 + B9d1 protein_coding processed_transcript MGP_LPJ_T0003302.1 MGP_LPJ_G0003050.1 mouse_genomes_project 11 100520141 100529619 + antisense antisense MGP_LPJ_T0003143.1 MGP_LPJ_G0002921.1 mouse_genomes_project 11 9711301 9736334 + Gm12002 antisense antisense MGP_LPJ_T0003144.1 MGP_LPJ_G0002921.1 mouse_genomes_project 11 9711320 9735032 + Gm12002 antisense antisense MGP_LPJ_T0003145.1 MGP_LPJ_G0002921.1 mouse_genomes_project 11 9718993 9751227 + Gm12002 antisense antisense MGP_LPJ_T0030980.1 MGP_LPJ_G0018694.1 mouse_genomes_project 11 80497262 80537541 + MGP_LPJ_P0030980 Nos2 protein_coding protein_coding MGP_LPJ_T0030981.1 MGP_LPJ_G0018694.1 mouse_genomes_project 11 80501705 80537095 + MGP_LPJ_P0030981 Nos2 protein_coding unknown_likely_coding MGP_LPJ_T0030114.1 MGP_LPJ_G0018488.1 mouse_genomes_project 11 71249991 71253864 + MGP_LPJ_P0030114 Clec10a protein_coding protein_coding MGP_LPJ_T0030115.1 MGP_LPJ_G0018488.1 mouse_genomes_project 11 71250023 71253863 + MGP_LPJ_P0030115 Clec10a protein_coding protein_coding MGP_LPJ_T0030116.1 MGP_LPJ_G0018488.1 mouse_genomes_project 11 71250099 71252065 + MGP_LPJ_P0030116 Clec10a protein_coding protein_coding MGP_LPJ_T0030117.1 MGP_LPJ_G0018488.1 mouse_genomes_project 11 71251063 71251373 + MGP_LPJ_P0030117 Clec10a protein_coding protein_coding MGP_LPJ_T0030118.1 MGP_LPJ_G0018488.1 mouse_genomes_project 11 71251312 71253604 + MGP_LPJ_P0030118 Clec10a protein_coding protein_coding MGP_LPJ_T0098913.1 MGP_LPJ_G0037176.1 mouse_genomes_project 11 70232929 70233034 + Gm23194 snRNA snRNA MGP_LPJ_T0029196.1 MGP_LPJ_G0018279.1 mouse_genomes_project 11 58980994 58986301 + MGP_LPJ_P0029196 Olfr320 protein_coding protein_coding MGP_LPJ_T0034091.1 MGP_LPJ_G0019429.1 mouse_genomes_project 11 125511819 125513684 - MGP_LPJ_P0034091 Dcxr protein_coding protein_coding MGP_LPJ_T0034092.1 MGP_LPJ_G0019429.1 mouse_genomes_project 11 125511819 125513646 - MGP_LPJ_P0034092 Dcxr protein_coding protein_coding MGP_LPJ_T0034093.1 MGP_LPJ_G0019429.1 mouse_genomes_project 11 125511845 125513647 - Dcxr protein_coding retained_intron MGP_LPJ_T0034094.1 MGP_LPJ_G0019429.1 mouse_genomes_project 11 125511875 125513632 - Dcxr protein_coding processed_transcript MGP_LPJ_T0028438.1 MGP_LPJ_G0018059.1 mouse_genomes_project 11 32646510 32691801 + MGP_LPJ_P0028438 Lcp2 protein_coding protein_coding MGP_LPJ_T0028439.1 MGP_LPJ_G0018059.1 mouse_genomes_project 11 32646756 32689729 + MGP_LPJ_P0028439 Lcp2 protein_coding protein_coding MGP_LPJ_T0028440.1 MGP_LPJ_G0018059.1 mouse_genomes_project 11 32646789 32691786 + MGP_LPJ_P0028440 Lcp2 protein_coding protein_coding MGP_LPJ_T0028441.1 MGP_LPJ_G0018059.1 mouse_genomes_project 11 32677761 32678177 + Lcp2 protein_coding processed_transcript MGP_LPJ_T0028442.1 MGP_LPJ_G0018059.1 mouse_genomes_project 11 32686594 32690258 + Lcp2 protein_coding processed_transcript MGP_LPJ_T0031888.1 MGP_LPJ_G0018930.1 mouse_genomes_project 11 100077471 100108275 - MGP_LPJ_P0031888 Kpnb1 protein_coding protein_coding MGP_LPJ_T0031889.1 MGP_LPJ_G0018930.1 mouse_genomes_project 11 100083752 100084932 - Kpnb1 protein_coding retained_intron MGP_LPJ_T0003240.1 MGP_LPJ_G0003002.1 mouse_genomes_project 11 70400204 70401393 + Kdm6bos antisense antisense MGP_LPJ_T0100144.1 MGP_LPJ_G0038407.1 mouse_genomes_project 11 48074278 48074346 + Snord95 snoRNA snoRNA MGP_LPJ_T0012741.1 MGP_LPJ_G0010832.1 mouse_genomes_project 11 107169261 107170125 - processed_pseudogene processed_pseudogene MGP_LPJ_T0028980.1 MGP_LPJ_G0018214.1 mouse_genomes_project 11 53635713 53643826 + MGP_LPJ_P0028980 Irf1 protein_coding protein_coding MGP_LPJ_T0028981.1 MGP_LPJ_G0018214.1 mouse_genomes_project 11 53635747 53641606 + MGP_LPJ_P0028981 Irf1 protein_coding protein_coding MGP_LPJ_T0028982.1 MGP_LPJ_G0018214.1 mouse_genomes_project 11 53635750 53644877 + MGP_LPJ_P0028982 Irf1 protein_coding protein_coding MGP_LPJ_T0028983.1 MGP_LPJ_G0018214.1 mouse_genomes_project 11 53635770 53642881 + Irf1 protein_coding processed_transcript MGP_LPJ_T0028984.1 MGP_LPJ_G0018214.1 mouse_genomes_project 11 53635804 53640588 + MGP_LPJ_P0028984 Irf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0028985.1 MGP_LPJ_G0018214.1 mouse_genomes_project 11 53636175 53639441 + MGP_LPJ_P0028985 Irf1 protein_coding protein_coding MGP_LPJ_T0028986.1 MGP_LPJ_G0018214.1 mouse_genomes_project 11 53636185 53640697 + MGP_LPJ_P0028986 Irf1 protein_coding protein_coding MGP_LPJ_T0028987.1 MGP_LPJ_G0018214.1 mouse_genomes_project 11 53636193 53643826 + MGP_LPJ_P0028987 Irf1 protein_coding protein_coding MGP_LPJ_T0028988.1 MGP_LPJ_G0018214.1 mouse_genomes_project 11 53636207 53640460 + MGP_LPJ_P0028988 Irf1 protein_coding protein_coding MGP_LPJ_T0028990.1 MGP_LPJ_G0018214.1 mouse_genomes_project 11 53639655 53640633 + Irf1 protein_coding retained_intron MGP_LPJ_T0033108.1 MGP_LPJ_G0019232.1 mouse_genomes_project 11 113176604 113252863 - MGP_LPJ_P0033108 Rgs9 protein_coding protein_coding MGP_LPJ_T0033109.1 MGP_LPJ_G0019232.1 mouse_genomes_project 11 113176610 113202463 - MGP_LPJ_P0033109 Rgs9 protein_coding protein_coding MGP_LPJ_T0033110.1 MGP_LPJ_G0019232.1 mouse_genomes_project 11 113186294 113252800 - MGP_LPJ_P0033110 Rgs9 protein_coding protein_coding MGP_LPJ_T0033111.1 MGP_LPJ_G0019232.1 mouse_genomes_project 11 113191850 113199277 - Rgs9 protein_coding processed_transcript MGP_LPJ_T0033112.1 MGP_LPJ_G0019232.1 mouse_genomes_project 11 113209257 113252840 - MGP_LPJ_P0033112 Rgs9 protein_coding protein_coding MGP_LPJ_T0012635.1 MGP_LPJ_G0010726.1 mouse_genomes_project 11 63306528 63306827 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100132.1 MGP_LPJ_G0038395.1 mouse_genomes_project 11 21015978 21016087 - Gm24398 snoRNA snoRNA MGP_LPJ_T0011324.1 MGP_LPJ_G0009442.1 mouse_genomes_project 11 88374430 88374533 + Gm25427 misc_RNA misc_RNA MGP_LPJ_T0033568.1 MGP_LPJ_G0019326.1 mouse_genomes_project 11 120816436 120822636 - MGP_LPJ_P0033568 Foxj1 protein_coding protein_coding MGP_LPJ_T0032869.1 MGP_LPJ_G0019180.1 mouse_genomes_project 11 108247918 108306016 + MGP_LPJ_P0032869 Itgb3 protein_coding protein_coding MGP_LPJ_T0032870.1 MGP_LPJ_G0019180.1 mouse_genomes_project 11 108248007 108302729 + MGP_LPJ_P0032870 Itgb3 protein_coding unknown_likely_coding MGP_LPJ_T0032871.1 MGP_LPJ_G0019180.1 mouse_genomes_project 11 108277287 108305351 + Itgb3 protein_coding processed_transcript MGP_LPJ_T0012780.1 MGP_LPJ_G0010871.1 mouse_genomes_project 11 125573472 125580059 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012496.1 MGP_LPJ_G0010587.1 mouse_genomes_project 11 16960461 16960605 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003161.1 MGP_LPJ_G0002934.1 mouse_genomes_project 11 32899627 32908035 + 4930403D09Rik antisense antisense MGP_LPJ_T0100162.1 MGP_LPJ_G0038425.1 mouse_genomes_project 11 78523443 78523564 + Gm22772 snoRNA snoRNA MGP_LPJ_T0012580.1 MGP_LPJ_G0010671.1 mouse_genomes_project 11 47849065 47849596 + processed_pseudogene processed_pseudogene MGP_LPJ_T0033635.1 MGP_LPJ_G0019339.1 mouse_genomes_project 11 121205518 121227701 - MGP_LPJ_P0033635 St6galnac2 protein_coding protein_coding MGP_LPJ_T0033636.1 MGP_LPJ_G0019339.1 mouse_genomes_project 11 121207557 121211339 - St6galnac2 protein_coding processed_transcript MGP_LPJ_T0033637.1 MGP_LPJ_G0019339.1 mouse_genomes_project 11 121209151 121212951 - St6galnac2 protein_coding processed_transcript MGP_LPJ_T0033638.1 MGP_LPJ_G0019339.1 mouse_genomes_project 11 121213348 121216481 - St6galnac2 protein_coding processed_transcript MGP_LPJ_T0033639.1 MGP_LPJ_G0019339.1 mouse_genomes_project 11 121216580 121217582 - St6galnac2 protein_coding processed_transcript MGP_LPJ_T0033640.1 MGP_LPJ_G0019339.1 mouse_genomes_project 11 121221634 121227442 - St6galnac2 protein_coding processed_transcript MGP_LPJ_T0028048.1 MGP_LPJ_G0017965.1 mouse_genomes_project 11 14611547 14615010 + MGP_LPJ_P0028048 Cnrip1 protein_coding protein_coding MGP_LPJ_T0028049.1 MGP_LPJ_G0017965.1 mouse_genomes_project 11 14611764 14614247 + Cnrip1 protein_coding retained_intron MGP_LPJ_T0028050.1 MGP_LPJ_G0017965.1 mouse_genomes_project 11 14611779 14635127 + MGP_LPJ_P0028050 Cnrip1 protein_coding protein_coding MGP_LPJ_T0033786.1 MGP_LPJ_G0019371.1 mouse_genomes_project 11 123123716 123136981 + MGP_LPJ_P0033786 Engase protein_coding protein_coding MGP_LPJ_T0033787.1 MGP_LPJ_G0019371.1 mouse_genomes_project 11 123123828 123126141 + MGP_LPJ_P0033787 Engase protein_coding nonsense_mediated_decay MGP_LPJ_T0033788.1 MGP_LPJ_G0019371.1 mouse_genomes_project 11 123123833 123130836 + MGP_LPJ_P0033788 Engase protein_coding nonsense_mediated_decay MGP_LPJ_T0033789.1 MGP_LPJ_G0019371.1 mouse_genomes_project 11 123123847 123136859 + MGP_LPJ_P0033789 Engase protein_coding nonsense_mediated_decay MGP_LPJ_T0033790.1 MGP_LPJ_G0019371.1 mouse_genomes_project 11 123123859 123135545 + MGP_LPJ_P0033790 Engase protein_coding nonsense_mediated_decay MGP_LPJ_T0033791.1 MGP_LPJ_G0019371.1 mouse_genomes_project 11 123123870 123136981 + MGP_LPJ_P0033791 Engase protein_coding nonsense_mediated_decay MGP_LPJ_T0033792.1 MGP_LPJ_G0019371.1 mouse_genomes_project 11 123128893 123130718 + Engase protein_coding retained_intron MGP_LPJ_T0033793.1 MGP_LPJ_G0019371.1 mouse_genomes_project 11 123130160 123135545 + Engase protein_coding retained_intron MGP_LPJ_T0033794.1 MGP_LPJ_G0019371.1 mouse_genomes_project 11 123132261 123135281 + MGP_LPJ_P0033794 Engase protein_coding protein_coding MGP_LPJ_T0101791.1 MGP_LPJ_G0039829.1 mouse_genomes_project 11 103115615 103115818 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0100158.1 MGP_LPJ_G0038421.1 mouse_genomes_project 11 72352132 72352401 - snoRNA snoRNA MGP_LPJ_T0029969.1 MGP_LPJ_G0018460.1 mouse_genomes_project 11 70839792 70846282 - MGP_LPJ_P0029969 Fgf11 protein_coding protein_coding MGP_LPJ_T0029970.1 MGP_LPJ_G0018460.1 mouse_genomes_project 11 70839797 70846423 - MGP_LPJ_P0029970 Fgf11 protein_coding protein_coding MGP_LPJ_T0029105.1 MGP_LPJ_G0018241.1 mouse_genomes_project 11 55438712 55455555 - MGP_LPJ_P0029105 Atox1 protein_coding protein_coding MGP_LPJ_T0029106.1 MGP_LPJ_G0018241.1 mouse_genomes_project 11 55438715 55455513 - Atox1 protein_coding processed_transcript MGP_LPJ_T0012599.1 MGP_LPJ_G0010690.1 mouse_genomes_project 11 53785031 53787534 + processed_pseudogene processed_pseudogene MGP_LPJ_T0028936.1 MGP_LPJ_G0018200.1 mouse_genomes_project 11 53257175 53258165 - MGP_LPJ_P0028936 Leap2 protein_coding protein_coding MGP_LPJ_T0012640.1 MGP_LPJ_G0010731.1 mouse_genomes_project 11 65899116 65899708 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009778.1 MGP_LPJ_G0007896.1 mouse_genomes_project 11 120244359 120244422 + Mir5621 miRNA miRNA MGP_LPJ_T0029173.1 MGP_LPJ_G0018265.1 mouse_genomes_project 11 58701829 58708586 - MGP_LPJ_P0029173 4930504O13Rik protein_coding protein_coding MGP_LPJ_T0032819.1 MGP_LPJ_G0019170.1 mouse_genomes_project 11 107368134 107414645 + MGP_LPJ_P0032819 Wnt3 protein_coding protein_coding MGP_LPJ_T0029498.1 MGP_LPJ_G0018353.1 mouse_genomes_project 11 62217968 62265969 - Slc5a10 protein_coding processed_transcript MGP_LPJ_T0029499.1 MGP_LPJ_G0018353.1 mouse_genomes_project 11 62217969 62265089 - MGP_LPJ_P0029499 Slc5a10 protein_coding protein_coding MGP_LPJ_T0029500.1 MGP_LPJ_G0018353.1 mouse_genomes_project 11 62217969 62265942 - MGP_LPJ_P0029500 Slc5a10 protein_coding protein_coding MGP_LPJ_T0029501.1 MGP_LPJ_G0018353.1 mouse_genomes_project 11 62217979 62265140 - MGP_LPJ_P0029501 Slc5a10 protein_coding protein_coding MGP_LPJ_T0031181.1 MGP_LPJ_G0018750.1 mouse_genomes_project 11 85309198 85316692 - MGP_LPJ_P0031181 Gas2l2 protein_coding nonsense_mediated_decay MGP_LPJ_T0031182.1 MGP_LPJ_G0018750.1 mouse_genomes_project 11 85309198 85316692 - MGP_LPJ_P0031182 Gas2l2 protein_coding protein_coding MGP_LPJ_T0031713.1 MGP_LPJ_G0018881.1 mouse_genomes_project 11 97874850 97880028 + MGP_LPJ_P0031713 Dlx3 protein_coding protein_coding MGP_LPJ_T0033082.1 MGP_LPJ_G0019229.1 mouse_genomes_project 11 112327056 112771103 + MGP_LPJ_P0033082 Cep112 protein_coding protein_coding MGP_LPJ_T0033083.1 MGP_LPJ_G0019229.1 mouse_genomes_project 11 112327130 112771102 + MGP_LPJ_P0033083 Cep112 protein_coding protein_coding MGP_LPJ_T0033084.1 MGP_LPJ_G0019229.1 mouse_genomes_project 11 112327141 112377360 + Cep112 protein_coding retained_intron MGP_LPJ_T0033085.1 MGP_LPJ_G0019229.1 mouse_genomes_project 11 112327155 112343781 + MGP_LPJ_P0033085 Cep112 protein_coding protein_coding MGP_LPJ_T0033086.1 MGP_LPJ_G0019229.1 mouse_genomes_project 11 112327329 112436852 + MGP_LPJ_P0033086 Cep112 protein_coding protein_coding MGP_LPJ_T0033087.1 MGP_LPJ_G0019229.1 mouse_genomes_project 11 112327372 112771103 + MGP_LPJ_P0033087 Cep112 protein_coding protein_coding MGP_LPJ_T0033088.1 MGP_LPJ_G0019229.1 mouse_genomes_project 11 112327480 112770747 + MGP_LPJ_P0033088 Cep112 protein_coding protein_coding MGP_LPJ_T0033089.1 MGP_LPJ_G0019229.1 mouse_genomes_project 11 112405695 112770838 + MGP_LPJ_P0033089 Cep112 protein_coding protein_coding MGP_LPJ_T0033090.1 MGP_LPJ_G0019229.1 mouse_genomes_project 11 112436842 112478777 + Cep112 protein_coding retained_intron MGP_LPJ_T0033091.1 MGP_LPJ_G0019229.1 mouse_genomes_project 11 112494108 112672929 + MGP_LPJ_P0033091 Cep112 protein_coding protein_coding MGP_LPJ_T0033092.1 MGP_LPJ_G0019229.1 mouse_genomes_project 11 112513544 112573232 + Cep112 protein_coding processed_transcript MGP_LPJ_T0033093.1 MGP_LPJ_G0019229.1 mouse_genomes_project 11 112548156 112770741 + Cep112 protein_coding processed_transcript MGP_LPJ_T0033094.1 MGP_LPJ_G0019229.1 mouse_genomes_project 11 112553290 112766362 + Cep112 protein_coding processed_transcript MGP_LPJ_T0033095.1 MGP_LPJ_G0019229.1 mouse_genomes_project 11 112594776 112770837 + MGP_LPJ_P0033095 Cep112 protein_coding protein_coding MGP_LPJ_T0033096.1 MGP_LPJ_G0019229.1 mouse_genomes_project 11 112594783 112771103 + MGP_LPJ_P0033096 Cep112 protein_coding protein_coding MGP_LPJ_T0033097.1 MGP_LPJ_G0019229.1 mouse_genomes_project 11 112594792 112770842 + MGP_LPJ_P0033097 Cep112 protein_coding protein_coding MGP_LPJ_T0033098.1 MGP_LPJ_G0019229.1 mouse_genomes_project 11 112625520 112720866 + Cep112 protein_coding processed_transcript MGP_LPJ_T0033099.1 MGP_LPJ_G0019229.1 mouse_genomes_project 11 112667382 112769850 + MGP_LPJ_P0033099 Cep112 protein_coding protein_coding MGP_LPJ_T0034108.1 MGP_LPJ_G0019433.1 mouse_genomes_project 11 125581427 125588628 - MGP_LPJ_P0034108 Dus1l protein_coding protein_coding MGP_LPJ_T0034109.1 MGP_LPJ_G0019433.1 mouse_genomes_project 11 125581428 125582672 - Dus1l protein_coding retained_intron MGP_LPJ_T0034110.1 MGP_LPJ_G0019433.1 mouse_genomes_project 11 125581428 125588620 - MGP_LPJ_P0034110 Dus1l protein_coding protein_coding MGP_LPJ_T0034111.1 MGP_LPJ_G0019433.1 mouse_genomes_project 11 125581428 125588620 - MGP_LPJ_P0034111 Dus1l protein_coding protein_coding MGP_LPJ_T0034112.1 MGP_LPJ_G0019433.1 mouse_genomes_project 11 125581430 125582077 - Dus1l protein_coding retained_intron MGP_LPJ_T0034113.1 MGP_LPJ_G0019433.1 mouse_genomes_project 11 125581432 125588614 - Dus1l protein_coding retained_intron MGP_LPJ_T0034114.1 MGP_LPJ_G0019433.1 mouse_genomes_project 11 125581432 125588623 - MGP_LPJ_P0034114 Dus1l protein_coding protein_coding MGP_LPJ_T0034115.1 MGP_LPJ_G0019433.1 mouse_genomes_project 11 125584998 125588602 - MGP_LPJ_P0034115 Dus1l protein_coding protein_coding MGP_LPJ_T0034116.1 MGP_LPJ_G0019433.1 mouse_genomes_project 11 125586069 125588618 - MGP_LPJ_P0034116 Dus1l protein_coding protein_coding MGP_LPJ_T0003371.1 MGP_LPJ_G0003107.1 mouse_genomes_project 11 122745988 122749413 + Gm11738 antisense antisense MGP_LPJ_T0032884.1 MGP_LPJ_G0019184.1 mouse_genomes_project 11 108824981 108825350 + MGP_LPJ_P0032884 Gm10842 protein_coding protein_coding MGP_LPJ_T0033583.1 MGP_LPJ_G0019330.1 mouse_genomes_project 11 120936570 120952158 - MGP_LPJ_P0033583 Qrich2 protein_coding protein_coding MGP_LPJ_T0033584.1 MGP_LPJ_G0019330.1 mouse_genomes_project 11 120936572 120953048 - MGP_LPJ_P0033584 Qrich2 protein_coding protein_coding MGP_LPJ_T0033585.1 MGP_LPJ_G0019330.1 mouse_genomes_project 11 120939747 120944788 - Qrich2 protein_coding retained_intron MGP_LPJ_T0003132.1 MGP_LPJ_G0002913.1 mouse_genomes_project 11 1680119 1689151 - Gm11961 antisense antisense MGP_LPJ_T0003133.1 MGP_LPJ_G0002913.1 mouse_genomes_project 11 1686760 1691382 - Gm11961 antisense antisense MGP_LPJ_T0033619.1 MGP_LPJ_G0019335.1 mouse_genomes_project 11 121120250 121150046 - MGP_LPJ_P0033619 Rhbdf2 protein_coding protein_coding MGP_LPJ_T0033620.1 MGP_LPJ_G0019335.1 mouse_genomes_project 11 121120254 121152851 - MGP_LPJ_P0033620 Rhbdf2 protein_coding protein_coding MGP_LPJ_T0033621.1 MGP_LPJ_G0019335.1 mouse_genomes_project 11 121123171 121124680 - Rhbdf2 protein_coding processed_transcript MGP_LPJ_T0033622.1 MGP_LPJ_G0019335.1 mouse_genomes_project 11 121125337 121150093 - Rhbdf2 protein_coding retained_intron MGP_LPJ_T0032193.1 MGP_LPJ_G0019027.1 mouse_genomes_project 11 103080599 103082363 + MGP_LPJ_P0032193 protein_coding protein_coding MGP_LPJ_T0032172.1 MGP_LPJ_G0019006.1 mouse_genomes_project 11 102730478 102731071 - MGP_LPJ_P0032172 Krtap1-4 protein_coding protein_coding MGP_LPJ_T0033340.1 MGP_LPJ_G0019288.1 mouse_genomes_project 11 119827465 119839234 + MGP_LPJ_P0033340 protein_coding protein_coding MGP_LPJ_T0033341.1 MGP_LPJ_G0019288.1 mouse_genomes_project 11 119827487 119839234 + MGP_LPJ_P0033341 protein_coding protein_coding MGP_LPJ_T0033342.1 MGP_LPJ_G0019288.1 mouse_genomes_project 11 119827519 119838001 + MGP_LPJ_P0033342 protein_coding protein_coding MGP_LPJ_T0033343.1 MGP_LPJ_G0019288.1 mouse_genomes_project 11 119828276 119830390 + protein_coding retained_intron MGP_LPJ_T0033344.1 MGP_LPJ_G0019288.1 mouse_genomes_project 11 119837312 119838161 + protein_coding processed_transcript MGP_LPJ_T0000886.1 MGP_LPJ_G0000815.1 mouse_genomes_project 11 125357171 125358339 + TEC TEC MGP_LPJ_T0009763.1 MGP_LPJ_G0007881.1 mouse_genomes_project 11 104824102 104824169 - Mir6929 miRNA miRNA MGP_LPJ_T0003220.1 MGP_LPJ_G0002986.1 mouse_genomes_project 11 63372647 63378232 + Zfp286os antisense antisense MGP_LPJ_T0028520.1 MGP_LPJ_G0018080.1 mouse_genomes_project 11 42430625 42437422 - MGP_LPJ_P0028520 Pttg1 protein_coding protein_coding MGP_LPJ_T0028521.1 MGP_LPJ_G0018080.1 mouse_genomes_project 11 42430639 42437145 - MGP_LPJ_P0028521 Pttg1 protein_coding protein_coding MGP_LPJ_T0028522.1 MGP_LPJ_G0018080.1 mouse_genomes_project 11 42430640 42434142 - MGP_LPJ_P0028522 Pttg1 protein_coding protein_coding MGP_LPJ_T0028523.1 MGP_LPJ_G0018080.1 mouse_genomes_project 11 42430644 42437366 - MGP_LPJ_P0028523 Pttg1 protein_coding protein_coding MGP_LPJ_T0028524.1 MGP_LPJ_G0018080.1 mouse_genomes_project 11 42430648 42437381 - MGP_LPJ_P0028524 Pttg1 protein_coding protein_coding MGP_LPJ_T0028525.1 MGP_LPJ_G0018080.1 mouse_genomes_project 11 42430649 42437127 - MGP_LPJ_P0028525 Pttg1 protein_coding protein_coding MGP_LPJ_T0028526.1 MGP_LPJ_G0018080.1 mouse_genomes_project 11 42430653 42437145 - MGP_LPJ_P0028526 Pttg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0028527.1 MGP_LPJ_G0018080.1 mouse_genomes_project 11 42431406 42437391 - MGP_LPJ_P0028527 Pttg1 protein_coding protein_coding MGP_LPJ_T0028528.1 MGP_LPJ_G0018080.1 mouse_genomes_project 11 42434070 42437282 - Pttg1 protein_coding processed_transcript MGP_LPJ_T0028529.1 MGP_LPJ_G0018080.1 mouse_genomes_project 11 42435785 42437377 - Pttg1 protein_coding retained_intron MGP_LPJ_T0028690.1 MGP_LPJ_G0018131.1 mouse_genomes_project 11 48632440 48651770 + MGP_LPJ_P0028690 Mgat1 protein_coding protein_coding MGP_LPJ_T0028691.1 MGP_LPJ_G0018131.1 mouse_genomes_project 11 48632495 48651775 + MGP_LPJ_P0028691 Mgat1 protein_coding protein_coding MGP_LPJ_T0028692.1 MGP_LPJ_G0018131.1 mouse_genomes_project 11 48632658 48633710 + Mgat1 protein_coding processed_transcript MGP_LPJ_T0028693.1 MGP_LPJ_G0018131.1 mouse_genomes_project 11 48632816 48633667 + Mgat1 protein_coding processed_transcript MGP_LPJ_T0028694.1 MGP_LPJ_G0018131.1 mouse_genomes_project 11 48633480 48649439 + Mgat1 protein_coding processed_transcript MGP_LPJ_T0028695.1 MGP_LPJ_G0018131.1 mouse_genomes_project 11 48635726 48651743 + MGP_LPJ_P0028695 Mgat1 protein_coding protein_coding MGP_LPJ_T0028696.1 MGP_LPJ_G0018131.1 mouse_genomes_project 11 48635732 48649570 + Mgat1 protein_coding processed_transcript MGP_LPJ_T0028697.1 MGP_LPJ_G0018131.1 mouse_genomes_project 11 48637206 48639885 + Mgat1 protein_coding processed_transcript MGP_LPJ_T0028698.1 MGP_LPJ_G0018131.1 mouse_genomes_project 11 48638759 48651778 + MGP_LPJ_P0028698 Mgat1 protein_coding protein_coding MGP_LPJ_T0028699.1 MGP_LPJ_G0018131.1 mouse_genomes_project 11 48638812 48646220 + Mgat1 protein_coding processed_transcript MGP_LPJ_T0028700.1 MGP_LPJ_G0018131.1 mouse_genomes_project 11 48638819 48649439 + Mgat1 protein_coding processed_transcript MGP_LPJ_T0028701.1 MGP_LPJ_G0018131.1 mouse_genomes_project 11 48638837 48650039 + MGP_LPJ_P0028701 Mgat1 protein_coding protein_coding MGP_LPJ_T0028702.1 MGP_LPJ_G0018131.1 mouse_genomes_project 11 48644491 48646082 + Mgat1 protein_coding processed_transcript MGP_LPJ_T0028832.1 MGP_LPJ_G0018175.1 mouse_genomes_project 11 50912099 50923996 + MGP_LPJ_P0028832 Clk4 protein_coding protein_coding MGP_LPJ_T0028833.1 MGP_LPJ_G0018175.1 mouse_genomes_project 11 50912099 50922389 + MGP_LPJ_P0028833 Clk4 protein_coding nonsense_mediated_decay MGP_LPJ_T0028834.1 MGP_LPJ_G0018175.1 mouse_genomes_project 11 50913483 50935482 + MGP_LPJ_P0028834 Clk4 protein_coding protein_coding MGP_LPJ_T0028835.1 MGP_LPJ_G0018175.1 mouse_genomes_project 11 50913519 50925629 + MGP_LPJ_P0028835 Clk4 protein_coding nonsense_mediated_decay MGP_LPJ_T0028836.1 MGP_LPJ_G0018175.1 mouse_genomes_project 11 50913531 50917874 + Clk4 protein_coding retained_intron MGP_LPJ_T0028837.1 MGP_LPJ_G0018175.1 mouse_genomes_project 11 50913533 50922734 + Clk4 protein_coding retained_intron MGP_LPJ_T0028838.1 MGP_LPJ_G0018175.1 mouse_genomes_project 11 50913538 50923992 + MGP_LPJ_P0028838 Clk4 protein_coding nonsense_mediated_decay MGP_LPJ_T0028839.1 MGP_LPJ_G0018175.1 mouse_genomes_project 11 50913543 50922430 + Clk4 protein_coding retained_intron MGP_LPJ_T0028840.1 MGP_LPJ_G0018175.1 mouse_genomes_project 11 50913555 50935484 + MGP_LPJ_P0028840 Clk4 protein_coding protein_coding MGP_LPJ_T0028841.1 MGP_LPJ_G0018175.1 mouse_genomes_project 11 50922368 50927579 + Clk4 protein_coding retained_intron MGP_LPJ_T0028842.1 MGP_LPJ_G0018175.1 mouse_genomes_project 11 50923820 50935482 + MGP_LPJ_P0028842 Clk4 protein_coding protein_coding MGP_LPJ_T0028843.1 MGP_LPJ_G0018175.1 mouse_genomes_project 11 50923981 50926607 + Clk4 protein_coding retained_intron MGP_LPJ_T0028844.1 MGP_LPJ_G0018175.1 mouse_genomes_project 11 50925277 50925882 + Clk4 protein_coding retained_intron MGP_LPJ_T0028845.1 MGP_LPJ_G0018175.1 mouse_genomes_project 11 50933826 50934918 + Clk4 protein_coding retained_intron MGP_LPJ_T0003323.1 MGP_LPJ_G0003066.1 mouse_genomes_project 11 105429174 105429891 + Gm20659 antisense antisense MGP_LPJ_T0006291.1 MGP_LPJ_G0005255.1 mouse_genomes_project 11 72742131 72754764 - Gm12324 lincRNA lincRNA MGP_LPJ_T0031203.1 MGP_LPJ_G0018758.1 mouse_genomes_project 11 85550654 85551230 - MGP_LPJ_P0031203 Rpl9-ps1 protein_coding protein_coding MGP_LPJ_T0034181.1 MGP_LPJ_G0019449.1 mouse_genomes_project 11 126141309 126154362 - Wdr45b protein_coding processed_transcript MGP_LPJ_T0034182.1 MGP_LPJ_G0019449.1 mouse_genomes_project 11 126141435 126179826 - MGP_LPJ_P0034182 Wdr45b protein_coding unknown_likely_coding MGP_LPJ_T0034183.1 MGP_LPJ_G0019449.1 mouse_genomes_project 11 126144170 126179834 - MGP_LPJ_P0034183 Wdr45b protein_coding protein_coding MGP_LPJ_T0034184.1 MGP_LPJ_G0019449.1 mouse_genomes_project 11 126148453 126179886 - MGP_LPJ_P0034184 Wdr45b protein_coding protein_coding MGP_LPJ_T0034185.1 MGP_LPJ_G0019449.1 mouse_genomes_project 11 126172566 126179894 - Wdr45b protein_coding retained_intron MGP_LPJ_T0012692.1 MGP_LPJ_G0010783.1 mouse_genomes_project 11 85719986 85720598 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003211.1 MGP_LPJ_G0002978.1 mouse_genomes_project 11 62062736 62063558 + Gm12272 antisense antisense MGP_LPJ_T0003218.1 MGP_LPJ_G0002984.1 mouse_genomes_project 11 63240468 63244573 + Lrrc75aos1 antisense antisense MGP_LPJ_T0029673.1 MGP_LPJ_G0018392.1 mouse_genomes_project 11 67879726 67897195 + MGP_LPJ_P0029673 Sco1 protein_coding protein_coding MGP_LPJ_T0029674.1 MGP_LPJ_G0018392.1 mouse_genomes_project 11 67879726 67897444 + MGP_LPJ_P0029674 Sco1 protein_coding protein_coding MGP_LPJ_T0029675.1 MGP_LPJ_G0018392.1 mouse_genomes_project 11 67885663 67895965 + Sco1 protein_coding processed_transcript MGP_LPJ_T0029676.1 MGP_LPJ_G0018392.1 mouse_genomes_project 11 67890215 67898942 + Sco1 protein_coding processed_transcript MGP_LPJ_T0031784.1 MGP_LPJ_G0018901.1 mouse_genomes_project 11 98898050 98904869 - MGP_LPJ_P0031784 Atp5g1 protein_coding protein_coding MGP_LPJ_T0031785.1 MGP_LPJ_G0018901.1 mouse_genomes_project 11 98898065 98904236 - MGP_LPJ_P0031785 Atp5g1 protein_coding protein_coding MGP_LPJ_T0031786.1 MGP_LPJ_G0018901.1 mouse_genomes_project 11 98902185 98904780 - MGP_LPJ_P0031786 Atp5g1 protein_coding protein_coding MGP_LPJ_T0031787.1 MGP_LPJ_G0018901.1 mouse_genomes_project 11 98902188 98904818 - MGP_LPJ_P0031787 Atp5g1 protein_coding protein_coding MGP_LPJ_T0101773.1 MGP_LPJ_G0039811.1 mouse_genomes_project 11 75100748 75100789 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0100122.1 MGP_LPJ_G0038385.1 mouse_genomes_project 11 3830529 3830660 - Gm24313 snoRNA snoRNA MGP_LPJ_T0006197.1 MGP_LPJ_G0005175.1 mouse_genomes_project 11 16049374 16075193 - Gm12022 lincRNA lincRNA MGP_LPJ_T0003270.1 MGP_LPJ_G0003026.1 mouse_genomes_project 11 87790114 87800429 - Bcas3os2 antisense antisense MGP_LPJ_T0011334.1 MGP_LPJ_G0009452.1 mouse_genomes_project 11 121674514 121674842 + Gm22667 misc_RNA misc_RNA MGP_LPJ_T0003252.1 MGP_LPJ_G0003012.1 mouse_genomes_project 11 79925969 79937142 + Slc13a2os antisense antisense MGP_LPJ_T0101763.1 MGP_LPJ_G0039801.1 mouse_genomes_project 11 53812364 53812536 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0029171.1 MGP_LPJ_G0018263.1 mouse_genomes_project 11 58677074 58681987 + MGP_LPJ_P0029171 1810065E05Rik protein_coding protein_coding MGP_LPJ_T0030925.1 MGP_LPJ_G0018678.1 mouse_genomes_project 11 79853357 79858167 + MGP_LPJ_P0030925 Aldoc protein_coding protein_coding MGP_LPJ_T0030926.1 MGP_LPJ_G0018678.1 mouse_genomes_project 11 79853557 79855083 + Aldoc protein_coding retained_intron MGP_LPJ_T0030927.1 MGP_LPJ_G0018678.1 mouse_genomes_project 11 79854585 79857146 + MGP_LPJ_P0030927 Aldoc protein_coding protein_coding MGP_LPJ_T0030928.1 MGP_LPJ_G0018678.1 mouse_genomes_project 11 79854711 79856504 + Aldoc protein_coding processed_transcript MGP_LPJ_T0030929.1 MGP_LPJ_G0018678.1 mouse_genomes_project 11 79855450 79855947 + Aldoc protein_coding processed_transcript MGP_LPJ_T0030930.1 MGP_LPJ_G0018678.1 mouse_genomes_project 11 79855714 79857094 + Aldoc protein_coding processed_transcript MGP_LPJ_T0032706.1 MGP_LPJ_G0019144.1 mouse_genomes_project 11 106297296 106318751 + MGP_LPJ_P0032706 Adam11 protein_coding protein_coding MGP_LPJ_T0032707.1 MGP_LPJ_G0019144.1 mouse_genomes_project 11 106297296 106318751 + MGP_LPJ_P0032707 Adam11 protein_coding protein_coding MGP_LPJ_T0032708.1 MGP_LPJ_G0019144.1 mouse_genomes_project 11 106297942 106309963 + Adam11 protein_coding processed_transcript MGP_LPJ_T0032709.1 MGP_LPJ_G0019144.1 mouse_genomes_project 11 106298039 106310323 + Adam11 protein_coding processed_transcript MGP_LPJ_T0032710.1 MGP_LPJ_G0019144.1 mouse_genomes_project 11 106308289 106310256 + Adam11 protein_coding processed_transcript MGP_LPJ_T0032711.1 MGP_LPJ_G0019144.1 mouse_genomes_project 11 106309970 106312154 + Adam11 protein_coding processed_transcript MGP_LPJ_T0032712.1 MGP_LPJ_G0019144.1 mouse_genomes_project 11 106312573 106314619 + Adam11 protein_coding processed_transcript MGP_LPJ_T0032713.1 MGP_LPJ_G0019144.1 mouse_genomes_project 11 106312609 106314896 + Adam11 protein_coding processed_transcript MGP_LPJ_T0032714.1 MGP_LPJ_G0019144.1 mouse_genomes_project 11 106315048 106316962 + Adam11 protein_coding processed_transcript MGP_LPJ_T0003387.1 MGP_LPJ_G0003119.1 mouse_genomes_project 11 125766347 125767268 + Gm28192 antisense antisense MGP_LPJ_T0030269.1 MGP_LPJ_G0018519.1 mouse_genomes_project 11 71828169 71861707 + MGP_LPJ_P0030269 Kif1c protein_coding protein_coding MGP_LPJ_T0030270.1 MGP_LPJ_G0018519.1 mouse_genomes_project 11 71828169 71835191 + MGP_LPJ_P0030270 Kif1c protein_coding protein_coding MGP_LPJ_T0030271.1 MGP_LPJ_G0018519.1 mouse_genomes_project 11 71828182 71860128 + MGP_LPJ_P0030271 Kif1c protein_coding protein_coding MGP_LPJ_T0030272.1 MGP_LPJ_G0018519.1 mouse_genomes_project 11 71828197 71860165 + MGP_LPJ_P0030272 Kif1c protein_coding protein_coding MGP_LPJ_T0030273.1 MGP_LPJ_G0018519.1 mouse_genomes_project 11 71828271 71861707 + MGP_LPJ_P0030273 Kif1c protein_coding protein_coding MGP_LPJ_T0034207.1 MGP_LPJ_G0019457.1 mouse_genomes_project 11 126675718 126682260 + Ptchd3 protein_coding retained_intron MGP_LPJ_T0034208.1 MGP_LPJ_G0019457.1 mouse_genomes_project 11 126675718 126688891 + MGP_LPJ_P0034208 Ptchd3 protein_coding protein_coding MGP_LPJ_T0030513.1 MGP_LPJ_G0018591.1 mouse_genomes_project 11 75406918 75414859 - MGP_LPJ_P0030513 Olfr43 protein_coding protein_coding MGP_LPJ_T0030514.1 MGP_LPJ_G0018591.1 mouse_genomes_project 11 75407107 75414652 - MGP_LPJ_P0030514 Olfr43 protein_coding protein_coding MGP_LPJ_T0030515.1 MGP_LPJ_G0018591.1 mouse_genomes_project 11 75407107 75409818 - MGP_LPJ_P0030515 Olfr43 protein_coding protein_coding MGP_LPJ_T0030516.1 MGP_LPJ_G0018591.1 mouse_genomes_project 11 75407554 75410821 - MGP_LPJ_P0030516 Olfr43 protein_coding protein_coding MGP_LPJ_T0031352.1 MGP_LPJ_G0018793.1 mouse_genomes_project 11 88549321 88598316 - MGP_LPJ_P0031352 Rps6kb1 protein_coding protein_coding MGP_LPJ_T0031353.1 MGP_LPJ_G0018793.1 mouse_genomes_project 11 88552490 88598316 - Rps6kb1 protein_coding retained_intron MGP_LPJ_T0031354.1 MGP_LPJ_G0018793.1 mouse_genomes_project 11 88553054 88563446 - Rps6kb1 protein_coding processed_transcript MGP_LPJ_T0031355.1 MGP_LPJ_G0018793.1 mouse_genomes_project 11 88565441 88571861 - Rps6kb1 protein_coding processed_transcript MGP_LPJ_T0031356.1 MGP_LPJ_G0018793.1 mouse_genomes_project 11 88565806 88598285 - MGP_LPJ_P0031356 Rps6kb1 protein_coding protein_coding MGP_LPJ_T0031357.1 MGP_LPJ_G0018793.1 mouse_genomes_project 11 88571465 88585029 - Rps6kb1 protein_coding retained_intron MGP_LPJ_T0031358.1 MGP_LPJ_G0018793.1 mouse_genomes_project 11 88584960 88598276 - MGP_LPJ_P0031358 Rps6kb1 protein_coding protein_coding MGP_LPJ_T0029462.1 MGP_LPJ_G0018349.1 mouse_genomes_project 11 62019650 62025119 - Mapk7 protein_coding processed_transcript MGP_LPJ_T0029463.1 MGP_LPJ_G0018349.1 mouse_genomes_project 11 62019650 62025149 - Mapk7 protein_coding processed_transcript MGP_LPJ_T0029464.1 MGP_LPJ_G0018349.1 mouse_genomes_project 11 62019650 62025119 - Mapk7 protein_coding processed_transcript MGP_LPJ_T0029465.1 MGP_LPJ_G0018349.1 mouse_genomes_project 11 62019650 62025149 - MGP_LPJ_P0029465 Mapk7 protein_coding protein_coding MGP_LPJ_T0029466.1 MGP_LPJ_G0018349.1 mouse_genomes_project 11 62019650 62025119 - MGP_LPJ_P0029466 Mapk7 protein_coding protein_coding MGP_LPJ_T0029467.1 MGP_LPJ_G0018349.1 mouse_genomes_project 11 62019650 62025149 - MGP_LPJ_P0029467 Mapk7 protein_coding protein_coding MGP_LPJ_T0029468.1 MGP_LPJ_G0018349.1 mouse_genomes_project 11 62020297 62021789 - MGP_LPJ_P0029468 Mapk7 protein_coding protein_coding MGP_LPJ_T0029469.1 MGP_LPJ_G0018349.1 mouse_genomes_project 11 62022152 62024562 - Mapk7 protein_coding processed_transcript MGP_LPJ_T0029470.1 MGP_LPJ_G0018349.1 mouse_genomes_project 11 62022406 62025119 - Mapk7 protein_coding processed_transcript MGP_LPJ_T0029471.1 MGP_LPJ_G0018349.1 mouse_genomes_project 11 62022428 62025119 - Mapk7 protein_coding processed_transcript MGP_LPJ_T0029472.1 MGP_LPJ_G0018349.1 mouse_genomes_project 11 62022446 62025259 - Mapk7 protein_coding processed_transcript MGP_LPJ_T0029473.1 MGP_LPJ_G0018349.1 mouse_genomes_project 11 62022456 62025119 - Mapk7 protein_coding processed_transcript MGP_LPJ_T0029474.1 MGP_LPJ_G0018349.1 mouse_genomes_project 11 62022456 62025041 - Mapk7 protein_coding processed_transcript MGP_LPJ_T0029475.1 MGP_LPJ_G0018349.1 mouse_genomes_project 11 62022492 62025041 - Mapk7 protein_coding processed_transcript MGP_LPJ_T0028707.1 MGP_LPJ_G0018136.1 mouse_genomes_project 11 48865520 48866456 + MGP_LPJ_P0028707 Olfr1388 protein_coding protein_coding MGP_LPJ_T0000877.1 MGP_LPJ_G0000806.1 mouse_genomes_project 11 16595253 16596120 - TEC TEC MGP_LPJ_T0032501.1 MGP_LPJ_G0019109.1 mouse_genomes_project 11 104995330 105007342 + MGP_LPJ_P0032501 Tmem106a protein_coding protein_coding MGP_LPJ_T0032502.1 MGP_LPJ_G0019109.1 mouse_genomes_project 11 104995330 105007342 + MGP_LPJ_P0032502 Tmem106a protein_coding protein_coding MGP_LPJ_T0032503.1 MGP_LPJ_G0019109.1 mouse_genomes_project 11 104995332 105004988 + Tmem106a protein_coding processed_transcript MGP_LPJ_T0032504.1 MGP_LPJ_G0019109.1 mouse_genomes_project 11 104995345 105004494 + MGP_LPJ_P0032504 Tmem106a protein_coding protein_coding MGP_LPJ_T0032505.1 MGP_LPJ_G0019109.1 mouse_genomes_project 11 104995388 105004449 + MGP_LPJ_P0032505 Tmem106a protein_coding protein_coding MGP_LPJ_T0032506.1 MGP_LPJ_G0019109.1 mouse_genomes_project 11 105000099 105006320 + Tmem106a protein_coding processed_transcript MGP_LPJ_T0012699.1 MGP_LPJ_G0010790.1 mouse_genomes_project 11 89146463 89146934 + processed_pseudogene processed_pseudogene MGP_LPJ_T0031802.1 MGP_LPJ_G0018909.1 mouse_genomes_project 11 99152539 99155325 + Hoxb5 protein_coding retained_intron MGP_LPJ_T0031803.1 MGP_LPJ_G0018909.1 mouse_genomes_project 11 99152715 99155324 + MGP_LPJ_P0031803 Hoxb5 protein_coding protein_coding MGP_LPJ_T0029511.1 MGP_LPJ_G0018357.1 mouse_genomes_project 11 62422354 62483210 - MGP_LPJ_P0029511 Akap10 protein_coding protein_coding MGP_LPJ_T0029512.1 MGP_LPJ_G0018357.1 mouse_genomes_project 11 62422718 62430419 - Akap10 protein_coding processed_transcript MGP_LPJ_T0029513.1 MGP_LPJ_G0018357.1 mouse_genomes_project 11 62424832 62482968 - MGP_LPJ_P0029513 Akap10 protein_coding protein_coding MGP_LPJ_T0029514.1 MGP_LPJ_G0018357.1 mouse_genomes_project 11 62443717 62483184 - MGP_LPJ_P0029514 Akap10 protein_coding protein_coding MGP_LPJ_T0029515.1 MGP_LPJ_G0018357.1 mouse_genomes_project 11 62474887 62483165 - Akap10 protein_coding processed_transcript MGP_LPJ_T0031951.1 MGP_LPJ_G0018945.1 mouse_genomes_project 11 100746623 100753349 - MGP_LPJ_P0031951 protein_coding protein_coding MGP_LPJ_T0031952.1 MGP_LPJ_G0018945.1 mouse_genomes_project 11 100747134 100753188 - protein_coding processed_transcript MGP_LPJ_T0031953.1 MGP_LPJ_G0018945.1 mouse_genomes_project 11 100747152 100747938 - protein_coding processed_transcript MGP_LPJ_T0031954.1 MGP_LPJ_G0018945.1 mouse_genomes_project 11 100752273 100753274 - protein_coding processed_transcript MGP_LPJ_T0031955.1 MGP_LPJ_G0018945.1 mouse_genomes_project 11 100752315 100753294 - MGP_LPJ_P0031955 protein_coding protein_coding MGP_LPJ_T0029818.1 MGP_LPJ_G0018425.1 mouse_genomes_project 11 70087680 70098790 + MGP_LPJ_P0029818 Per1 protein_coding protein_coding MGP_LPJ_T0029819.1 MGP_LPJ_G0018425.1 mouse_genomes_project 11 70091279 70102293 + MGP_LPJ_P0029819 Per1 protein_coding protein_coding MGP_LPJ_T0029820.1 MGP_LPJ_G0018425.1 mouse_genomes_project 11 70092483 70093380 + MGP_LPJ_P0029820 Per1 protein_coding protein_coding MGP_LPJ_T0029821.1 MGP_LPJ_G0018425.1 mouse_genomes_project 11 70092489 70102281 + MGP_LPJ_P0029821 Per1 protein_coding protein_coding MGP_LPJ_T0029822.1 MGP_LPJ_G0018425.1 mouse_genomes_project 11 70092840 70098628 + MGP_LPJ_P0029822 Per1 protein_coding nonsense_mediated_decay MGP_LPJ_T0029823.1 MGP_LPJ_G0018425.1 mouse_genomes_project 11 70092853 70102293 + MGP_LPJ_P0029823 Per1 protein_coding protein_coding MGP_LPJ_T0003260.1 MGP_LPJ_G0003019.1 mouse_genomes_project 11 82798507 82809468 + Gm11417 antisense antisense MGP_LPJ_T0032473.1 MGP_LPJ_G0019105.1 mouse_genomes_project 11 104866350 104873812 - MGP_LPJ_P0032473 Vat1 protein_coding protein_coding MGP_LPJ_T0033678.1 MGP_LPJ_G0019346.1 mouse_genomes_project 11 121436410 121512279 + MGP_LPJ_P0033678 Mgat5b protein_coding protein_coding MGP_LPJ_T0033679.1 MGP_LPJ_G0019346.1 mouse_genomes_project 11 121471456 121498312 + Mgat5b protein_coding processed_transcript MGP_LPJ_T0033680.1 MGP_LPJ_G0019346.1 mouse_genomes_project 11 121490889 121502398 + MGP_LPJ_P0033680 Mgat5b protein_coding protein_coding MGP_LPJ_T0033681.1 MGP_LPJ_G0019346.1 mouse_genomes_project 11 121497077 121512271 + Mgat5b protein_coding retained_intron MGP_LPJ_T0033611.1 MGP_LPJ_G0019333.1 mouse_genomes_project 11 121055683 121061961 - Ube2o protein_coding processed_transcript MGP_LPJ_T0033612.1 MGP_LPJ_G0019333.1 mouse_genomes_project 11 121055683 121100316 - MGP_LPJ_P0033612 Ube2o protein_coding protein_coding MGP_LPJ_T0033613.1 MGP_LPJ_G0019333.1 mouse_genomes_project 11 121063741 121066841 - Ube2o protein_coding processed_transcript MGP_LPJ_T0006311.1 MGP_LPJ_G0005269.1 mouse_genomes_project 11 83751817 83755181 + Gm11419 lincRNA lincRNA MGP_LPJ_T0012732.1 MGP_LPJ_G0010823.1 mouse_genomes_project 11 104694921 104695560 + processed_pseudogene processed_pseudogene MGP_LPJ_T0031047.1 MGP_LPJ_G0018712.1 mouse_genomes_project 11 81875551 81935994 + MGP_LPJ_P0031047 Rhot1 protein_coding protein_coding MGP_LPJ_T0031048.1 MGP_LPJ_G0018712.1 mouse_genomes_project 11 81875587 81937089 + MGP_LPJ_P0031048 Rhot1 protein_coding protein_coding MGP_LPJ_T0031049.1 MGP_LPJ_G0018712.1 mouse_genomes_project 11 81875616 81936668 + MGP_LPJ_P0031049 Rhot1 protein_coding protein_coding MGP_LPJ_T0031050.1 MGP_LPJ_G0018712.1 mouse_genomes_project 11 81875645 81920548 + Rhot1 protein_coding retained_intron MGP_LPJ_T0031051.1 MGP_LPJ_G0018712.1 mouse_genomes_project 11 81875651 81935949 + MGP_LPJ_P0031051 Rhot1 protein_coding protein_coding MGP_LPJ_T0031052.1 MGP_LPJ_G0018712.1 mouse_genomes_project 11 81875679 81914914 + Rhot1 protein_coding retained_intron MGP_LPJ_T0031053.1 MGP_LPJ_G0018712.1 mouse_genomes_project 11 81875819 81935041 + MGP_LPJ_P0031053 Rhot1 protein_coding protein_coding MGP_LPJ_T0031054.1 MGP_LPJ_G0018712.1 mouse_genomes_project 11 81918184 81935920 + Rhot1 protein_coding processed_transcript MGP_LPJ_T0031055.1 MGP_LPJ_G0018712.1 mouse_genomes_project 11 81921006 81923116 + Rhot1 protein_coding retained_intron MGP_LPJ_T0003333.1 MGP_LPJ_G0003076.1 mouse_genomes_project 11 108861219 108866749 - 1700052K11Rik antisense antisense MGP_LPJ_T0012746.1 MGP_LPJ_G0010837.1 mouse_genomes_project 11 108586960 108587549 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003344.1 MGP_LPJ_G0003085.1 mouse_genomes_project 11 111253503 111256666 + Gm11713 antisense antisense MGP_LPJ_T0028615.1 MGP_LPJ_G0018107.1 mouse_genomes_project 11 45791990 45822069 - MGP_LPJ_P0028615 Dppa1 protein_coding protein_coding MGP_LPJ_T0028616.1 MGP_LPJ_G0018107.1 mouse_genomes_project 11 45792928 45822069 - MGP_LPJ_P0028616 Dppa1 protein_coding protein_coding MGP_LPJ_T0034126.1 MGP_LPJ_G0019436.1 mouse_genomes_project 11 125751011 125761284 + MGP_LPJ_P0034126 Slc16a3 protein_coding protein_coding MGP_LPJ_T0034127.1 MGP_LPJ_G0019436.1 mouse_genomes_project 11 125751584 125759256 + MGP_LPJ_P0034127 Slc16a3 protein_coding protein_coding MGP_LPJ_T0034128.1 MGP_LPJ_G0019436.1 mouse_genomes_project 11 125751598 125761509 + MGP_LPJ_P0034128 Slc16a3 protein_coding protein_coding MGP_LPJ_T0034129.1 MGP_LPJ_G0019436.1 mouse_genomes_project 11 125751602 125759370 + MGP_LPJ_P0034129 Slc16a3 protein_coding protein_coding MGP_LPJ_T0034130.1 MGP_LPJ_G0019436.1 mouse_genomes_project 11 125751612 125763369 + MGP_LPJ_P0034130 Slc16a3 protein_coding protein_coding MGP_LPJ_T0034131.1 MGP_LPJ_G0019436.1 mouse_genomes_project 11 125753219 125757783 + MGP_LPJ_P0034131 Slc16a3 protein_coding protein_coding MGP_LPJ_T0034132.1 MGP_LPJ_G0019436.1 mouse_genomes_project 11 125753669 125756722 + Slc16a3 protein_coding processed_transcript MGP_LPJ_T0034133.1 MGP_LPJ_G0019436.1 mouse_genomes_project 11 125757735 125758740 + Slc16a3 protein_coding retained_intron MGP_LPJ_T0012543.1 MGP_LPJ_G0010634.1 mouse_genomes_project 11 28909433 28911061 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006399.1 MGP_LPJ_G0005332.1 mouse_genomes_project 11 123826705 123832044 + Gm26888 lincRNA lincRNA MGP_LPJ_T0006214.1 MGP_LPJ_G0005191.1 mouse_genomes_project 11 22347147 22645781 + lincRNA lincRNA MGP_LPJ_T0100151.1 MGP_LPJ_G0038414.1 mouse_genomes_project 11 63206288 63206360 + Snord49a snoRNA snoRNA MGP_LPJ_T0012736.1 MGP_LPJ_G0010827.1 mouse_genomes_project 11 105578621 105578946 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012663.1 MGP_LPJ_G0010754.1 mouse_genomes_project 11 75046546 75048366 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012507.1 MGP_LPJ_G0010598.1 mouse_genomes_project 11 18831988 18832282 + processed_pseudogene processed_pseudogene MGP_LPJ_T0031983.1 MGP_LPJ_G0018951.1 mouse_genomes_project 11 100984054 101005481 - MGP_LPJ_P0031983 Cacnb1 protein_coding protein_coding MGP_LPJ_T0031984.1 MGP_LPJ_G0018951.1 mouse_genomes_project 11 100985447 101005474 - MGP_LPJ_P0031984 Cacnb1 protein_coding protein_coding MGP_LPJ_T0031985.1 MGP_LPJ_G0018951.1 mouse_genomes_project 11 100987417 101001284 - MGP_LPJ_P0031985 Cacnb1 protein_coding protein_coding MGP_LPJ_T0031986.1 MGP_LPJ_G0018951.1 mouse_genomes_project 11 100987595 101005481 - MGP_LPJ_P0031986 Cacnb1 protein_coding protein_coding MGP_LPJ_T0031987.1 MGP_LPJ_G0018951.1 mouse_genomes_project 11 100987595 101005481 - MGP_LPJ_P0031987 Cacnb1 protein_coding protein_coding MGP_LPJ_T0031988.1 MGP_LPJ_G0018951.1 mouse_genomes_project 11 100992276 101005887 - Cacnb1 protein_coding processed_transcript MGP_LPJ_T0031989.1 MGP_LPJ_G0018951.1 mouse_genomes_project 11 100992311 100995206 - Cacnb1 protein_coding processed_transcript MGP_LPJ_T0009713.1 MGP_LPJ_G0007831.1 mouse_genomes_project 11 71055760 71055883 + Gm44349 miRNA miRNA MGP_LPJ_T0029201.1 MGP_LPJ_G0018283.1 mouse_genomes_project 11 59091046 59095382 + MGP_LPJ_P0029201 Olfr314 protein_coding protein_coding MGP_LPJ_T0029202.1 MGP_LPJ_G0018283.1 mouse_genomes_project 11 59094500 59095631 + MGP_LPJ_P0029202 Olfr314 protein_coding protein_coding MGP_LPJ_T0027843.1 MGP_LPJ_G0017917.1 mouse_genomes_project 11 2963491 2965584 - MGP_LPJ_P0027843 Pgam2 protein_coding protein_coding MGP_LPJ_T0032923.1 MGP_LPJ_G0019191.1 mouse_genomes_project 11 109717923 109728657 + MGP_LPJ_P0032923 Ace3 protein_coding protein_coding MGP_LPJ_T0012645.1 MGP_LPJ_G0010736.1 mouse_genomes_project 11 70651045 70651434 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003183.1 MGP_LPJ_G0002955.1 mouse_genomes_project 11 53299337 53300572 - Gm12212 antisense antisense MGP_LPJ_T0006356.1 MGP_LPJ_G0005299.1 mouse_genomes_project 11 105039922 105040484 + lincRNA lincRNA MGP_LPJ_T0006357.1 MGP_LPJ_G0005299.1 mouse_genomes_project 11 105040008 105046538 + lincRNA lincRNA MGP_LPJ_T0003234.1 MGP_LPJ_G0002996.1 mouse_genomes_project 11 68438350 68444167 - Gm12301 antisense antisense MGP_LPJ_T0012784.1 MGP_LPJ_G0010875.1 mouse_genomes_project 11 126235321 126235656 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006296.1 MGP_LPJ_G0005259.1 mouse_genomes_project 11 74177323 74180305 - 4732414G09Rik lincRNA lincRNA MGP_LPJ_T0006297.1 MGP_LPJ_G0005259.1 mouse_genomes_project 11 74177323 74180268 - 4732414G09Rik lincRNA lincRNA MGP_LPJ_T0031196.1 MGP_LPJ_G0018755.1 mouse_genomes_project 11 85419434 85424181 - MGP_LPJ_P0031196 Ccl5 protein_coding protein_coding MGP_LPJ_T0031197.1 MGP_LPJ_G0018755.1 mouse_genomes_project 11 85422394 85424176 - Ccl5 protein_coding retained_intron MGP_LPJ_T0100172.1 MGP_LPJ_G0038435.1 mouse_genomes_project 11 93157893 93158030 - Gm22762 snoRNA snoRNA MGP_LPJ_T0028706.1 MGP_LPJ_G0018135.1 mouse_genomes_project 11 48852252 48853325 + MGP_LPJ_P0028706 Olfr1389 protein_coding protein_coding MGP_LPJ_T0006335.1 MGP_LPJ_G0005285.1 mouse_genomes_project 11 91603795 91610856 + Gm2018 lincRNA lincRNA MGP_LPJ_T0032316.1 MGP_LPJ_G0019070.1 mouse_genomes_project 11 104092291 104094151 - MGP_LPJ_P0032316 Hcrt protein_coding protein_coding MGP_LPJ_T0032317.1 MGP_LPJ_G0019070.1 mouse_genomes_project 11 104092913 104094154 - MGP_LPJ_P0032317 Hcrt protein_coding protein_coding MGP_LPJ_T0033369.1 MGP_LPJ_G0019294.1 mouse_genomes_project 11 119941094 119955110 - MGP_LPJ_P0033369 Sumo2 protein_coding protein_coding MGP_LPJ_T0033370.1 MGP_LPJ_G0019294.1 mouse_genomes_project 11 119948962 119955010 - Sumo2 protein_coding retained_intron MGP_LPJ_T0033371.1 MGP_LPJ_G0019294.1 mouse_genomes_project 11 119953212 119955023 - Sumo2 protein_coding retained_intron MGP_LPJ_T0012633.1 MGP_LPJ_G0010724.1 mouse_genomes_project 11 62883946 62884253 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009722.1 MGP_LPJ_G0007840.1 mouse_genomes_project 11 73799981 73800054 + Gm25678 miRNA miRNA MGP_LPJ_T0030176.1 MGP_LPJ_G0018501.1 mouse_genomes_project 11 71559068 71564692 - MGP_LPJ_P0030176 Cxcl16 protein_coding protein_coding MGP_LPJ_T0030177.1 MGP_LPJ_G0018501.1 mouse_genomes_project 11 71559323 71564116 - MGP_LPJ_P0030177 Cxcl16 protein_coding nonsense_mediated_decay MGP_LPJ_T0030178.1 MGP_LPJ_G0018501.1 mouse_genomes_project 11 71559915 71564540 - Cxcl16 protein_coding retained_intron MGP_LPJ_T0027711.1 MGP_LPJ_G0017888.1 mouse_genomes_project 11 1224107 1253159 + Tbc1d10a protein_coding processed_transcript MGP_LPJ_T0027712.1 MGP_LPJ_G0017888.1 mouse_genomes_project 11 1224107 1253779 + MGP_LPJ_P0027712 Tbc1d10a protein_coding protein_coding MGP_LPJ_T0027713.1 MGP_LPJ_G0017888.1 mouse_genomes_project 11 1224140 1253776 + MGP_LPJ_P0027713 Tbc1d10a protein_coding protein_coding MGP_LPJ_T0027714.1 MGP_LPJ_G0017888.1 mouse_genomes_project 11 1243690 1248264 + Tbc1d10a protein_coding processed_transcript MGP_LPJ_T0027715.1 MGP_LPJ_G0017888.1 mouse_genomes_project 11 1250584 1251874 + Tbc1d10a protein_coding processed_transcript MGP_LPJ_T0027716.1 MGP_LPJ_G0017888.1 mouse_genomes_project 11 1250748 1252130 + Tbc1d10a protein_coding processed_transcript MGP_LPJ_T0012727.1 MGP_LPJ_G0010818.1 mouse_genomes_project 11 102429094 102431915 - processed_pseudogene processed_pseudogene MGP_LPJ_T0028318.1 MGP_LPJ_G0018025.1 mouse_genomes_project 11 28831962 28998173 - MGP_LPJ_P0028318 Acyp2 protein_coding protein_coding MGP_LPJ_T0032181.1 MGP_LPJ_G0019015.1 mouse_genomes_project 11 102828593 102829111 - MGP_LPJ_P0032181 Gm11555 protein_coding protein_coding MGP_LPJ_T0031262.1 MGP_LPJ_G0018775.1 mouse_genomes_project 11 86796899 86805001 - MGP_LPJ_P0031262 Dhrs11 protein_coding protein_coding MGP_LPJ_T0031263.1 MGP_LPJ_G0018775.1 mouse_genomes_project 11 86798035 86805031 - MGP_LPJ_P0031263 Dhrs11 protein_coding nonsense_mediated_decay MGP_LPJ_T0031243.1 MGP_LPJ_G0018771.1 mouse_genomes_project 11 86081820 86105495 - MGP_LPJ_P0031243 Gm11437 protein_coding protein_coding MGP_LPJ_T0031113.1 MGP_LPJ_G0018731.1 mouse_genomes_project 11 84508310 84555525 - MGP_LPJ_P0031113 Cct6b protein_coding protein_coding MGP_LPJ_T0031114.1 MGP_LPJ_G0018731.1 mouse_genomes_project 11 84508310 84555540 - MGP_LPJ_P0031114 Cct6b protein_coding protein_coding MGP_LPJ_T0027853.1 MGP_LPJ_G0017920.1 mouse_genomes_project 11 3036774 3042866 - MGP_LPJ_P0027853 Pold2 protein_coding protein_coding MGP_LPJ_T0027854.1 MGP_LPJ_G0017920.1 mouse_genomes_project 11 3036782 3037786 - Pold2 protein_coding retained_intron MGP_LPJ_T0027855.1 MGP_LPJ_G0017920.1 mouse_genomes_project 11 3038668 3042239 - MGP_LPJ_P0027855 Pold2 protein_coding protein_coding MGP_LPJ_T0027856.1 MGP_LPJ_G0017920.1 mouse_genomes_project 11 3038705 3041341 - Pold2 protein_coding retained_intron MGP_LPJ_T0027857.1 MGP_LPJ_G0017920.1 mouse_genomes_project 11 3039758 3042786 - Pold2 protein_coding processed_transcript MGP_LPJ_T0031530.1 MGP_LPJ_G0018841.1 mouse_genomes_project 11 92514340 92587626 + Mmd protein_coding processed_transcript MGP_LPJ_T0031531.1 MGP_LPJ_G0018841.1 mouse_genomes_project 11 92514340 92589985 + Mmd protein_coding processed_transcript MGP_LPJ_T0031532.1 MGP_LPJ_G0018841.1 mouse_genomes_project 11 92514342 92566817 + Mmd protein_coding processed_transcript MGP_LPJ_T0031533.1 MGP_LPJ_G0018841.1 mouse_genomes_project 11 92588185 92607067 + MGP_LPJ_P0031533 Mmd protein_coding protein_coding MGP_LPJ_T0031534.1 MGP_LPJ_G0018841.1 mouse_genomes_project 11 92588205 92617206 + MGP_LPJ_P0031534 Mmd protein_coding protein_coding MGP_LPJ_T0030897.1 MGP_LPJ_G0018673.1 mouse_genomes_project 11 79728886 79772357 - MGP_LPJ_P0030897 Supt6 protein_coding protein_coding MGP_LPJ_T0030898.1 MGP_LPJ_G0018673.1 mouse_genomes_project 11 79729168 79745859 - Supt6 protein_coding retained_intron MGP_LPJ_T0034017.1 MGP_LPJ_G0019419.1 mouse_genomes_project 11 125387179 125397608 - MGP_LPJ_P0034017 Pcyt2 protein_coding protein_coding MGP_LPJ_T0034018.1 MGP_LPJ_G0019419.1 mouse_genomes_project 11 125387545 125397597 - MGP_LPJ_P0034018 Pcyt2 protein_coding protein_coding MGP_LPJ_T0034019.1 MGP_LPJ_G0019419.1 mouse_genomes_project 11 125389304 125390742 - Pcyt2 protein_coding retained_intron MGP_LPJ_T0034020.1 MGP_LPJ_G0019419.1 mouse_genomes_project 11 125389508 125390714 - Pcyt2 protein_coding retained_intron MGP_LPJ_T0034021.1 MGP_LPJ_G0019419.1 mouse_genomes_project 11 125390260 125391709 - Pcyt2 protein_coding retained_intron MGP_LPJ_T0034022.1 MGP_LPJ_G0019419.1 mouse_genomes_project 11 125390837 125397580 - Pcyt2 protein_coding retained_intron MGP_LPJ_T0034023.1 MGP_LPJ_G0019419.1 mouse_genomes_project 11 125391228 125392330 - Pcyt2 protein_coding retained_intron MGP_LPJ_T0034024.1 MGP_LPJ_G0019419.1 mouse_genomes_project 11 125391567 125392224 - Pcyt2 protein_coding retained_intron MGP_LPJ_T0034025.1 MGP_LPJ_G0019419.1 mouse_genomes_project 11 125391611 125394191 - Pcyt2 protein_coding retained_intron MGP_LPJ_T0034026.1 MGP_LPJ_G0019419.1 mouse_genomes_project 11 125391664 125397585 - Pcyt2 protein_coding processed_transcript MGP_LPJ_T0034027.1 MGP_LPJ_G0019419.1 mouse_genomes_project 11 125394814 125397582 - Pcyt2 protein_coding retained_intron MGP_LPJ_T0034028.1 MGP_LPJ_G0019419.1 mouse_genomes_project 11 125395085 125397541 - Pcyt2 protein_coding retained_intron MGP_LPJ_T0029093.1 MGP_LPJ_G0018238.1 mouse_genomes_project 11 55177115 55212548 + MGP_LPJ_P0029093 Slc36a1 protein_coding protein_coding MGP_LPJ_T0029094.1 MGP_LPJ_G0018238.1 mouse_genomes_project 11 55177127 55188388 + Slc36a1 protein_coding processed_transcript MGP_LPJ_T0029095.1 MGP_LPJ_G0018238.1 mouse_genomes_project 11 55177139 55196194 + MGP_LPJ_P0029095 Slc36a1 protein_coding protein_coding MGP_LPJ_T0029096.1 MGP_LPJ_G0018238.1 mouse_genomes_project 11 55177141 55210047 + MGP_LPJ_P0029096 Slc36a1 protein_coding protein_coding MGP_LPJ_T0029097.1 MGP_LPJ_G0018238.1 mouse_genomes_project 11 55187920 55206791 + MGP_LPJ_P0029097 Slc36a1 protein_coding protein_coding MGP_LPJ_T0029953.1 MGP_LPJ_G0018456.1 mouse_genomes_project 11 70771936 70799639 - MGP_LPJ_P0029953 Polr2a protein_coding protein_coding MGP_LPJ_T0029954.1 MGP_LPJ_G0018456.1 mouse_genomes_project 11 70772349 70798183 - MGP_LPJ_P0029954 Polr2a protein_coding protein_coding MGP_LPJ_T0029955.1 MGP_LPJ_G0018456.1 mouse_genomes_project 11 70774150 70775288 - Polr2a protein_coding processed_transcript MGP_LPJ_T0029956.1 MGP_LPJ_G0018456.1 mouse_genomes_project 11 70779563 70780510 - Polr2a protein_coding processed_transcript MGP_LPJ_T0033960.1 MGP_LPJ_G0019405.1 mouse_genomes_project 11 125221469 125222932 - MGP_LPJ_P0033960 Oxld1 protein_coding protein_coding MGP_LPJ_T0033961.1 MGP_LPJ_G0019405.1 mouse_genomes_project 11 125221748 125222800 - MGP_LPJ_P0033961 Oxld1 protein_coding protein_coding MGP_LPJ_T0033528.1 MGP_LPJ_G0019319.1 mouse_genomes_project 11 120612926 120638442 - Fbf1 protein_coding processed_transcript MGP_LPJ_T0033529.1 MGP_LPJ_G0019319.1 mouse_genomes_project 11 120612926 120617782 - Fbf1 protein_coding processed_transcript MGP_LPJ_T0033530.1 MGP_LPJ_G0019319.1 mouse_genomes_project 11 120612926 120638815 - MGP_LPJ_P0033530 Fbf1 protein_coding protein_coding MGP_LPJ_T0033531.1 MGP_LPJ_G0019319.1 mouse_genomes_project 11 120612927 120636576 - MGP_LPJ_P0033531 Fbf1 protein_coding protein_coding MGP_LPJ_T0033532.1 MGP_LPJ_G0019319.1 mouse_genomes_project 11 120613883 120621417 - Fbf1 protein_coding processed_transcript MGP_LPJ_T0033533.1 MGP_LPJ_G0019319.1 mouse_genomes_project 11 120625338 120628110 - Fbf1 protein_coding processed_transcript MGP_LPJ_T0033534.1 MGP_LPJ_G0019319.1 mouse_genomes_project 11 120625369 120629513 - Fbf1 protein_coding processed_transcript MGP_LPJ_T0033535.1 MGP_LPJ_G0019319.1 mouse_genomes_project 11 120625705 120638816 - MGP_LPJ_P0033535 Fbf1 protein_coding protein_coding MGP_LPJ_T0033536.1 MGP_LPJ_G0019319.1 mouse_genomes_project 11 120626596 120636545 - Fbf1 protein_coding processed_transcript MGP_LPJ_T0033537.1 MGP_LPJ_G0019319.1 mouse_genomes_project 11 120633990 120638828 - Fbf1 protein_coding processed_transcript MGP_LPJ_T0033538.1 MGP_LPJ_G0019319.1 mouse_genomes_project 11 120635341 120638810 - MGP_LPJ_P0033538 Fbf1 protein_coding protein_coding MGP_LPJ_T0033539.1 MGP_LPJ_G0019319.1 mouse_genomes_project 11 120636444 120638427 - Fbf1 protein_coding retained_intron MGP_LPJ_T0032112.1 MGP_LPJ_G0018981.1 mouse_genomes_project 11 101985114 102002386 + MGP_LPJ_P0032112 Cdc6 protein_coding protein_coding MGP_LPJ_T0032113.1 MGP_LPJ_G0018981.1 mouse_genomes_project 11 101985162 102002388 + MGP_LPJ_P0032113 Cdc6 protein_coding nonsense_mediated_decay MGP_LPJ_T0032114.1 MGP_LPJ_G0018981.1 mouse_genomes_project 11 101985464 102000236 + MGP_LPJ_P0032114 Cdc6 protein_coding protein_coding MGP_LPJ_T0032115.1 MGP_LPJ_G0018981.1 mouse_genomes_project 11 101998809 101999804 + Cdc6 protein_coding retained_intron MGP_LPJ_T0028846.1 MGP_LPJ_G0018176.1 mouse_genomes_project 11 50943637 51256262 + MGP_LPJ_P0028846 Col23a1 protein_coding protein_coding MGP_LPJ_T0028847.1 MGP_LPJ_G0018176.1 mouse_genomes_project 11 51245886 51252643 + MGP_LPJ_P0028847 Col23a1 protein_coding protein_coding MGP_LPJ_T0009782.1 MGP_LPJ_G0007900.1 mouse_genomes_project 11 123510798 123510864 - Gm25040 miRNA miRNA MGP_LPJ_T0028423.1 MGP_LPJ_G0018054.1 mouse_genomes_project 11 31826481 31827461 - Gm12117 protein_coding translated_processed_pseudogene MGP_LPJ_T0028424.1 MGP_LPJ_G0018054.1 mouse_genomes_project 11 31826602 31827058 - MGP_LPJ_P0028424 Gm12117 protein_coding protein_coding MGP_LPJ_T0011329.1 MGP_LPJ_G0009447.1 mouse_genomes_project 11 104107122 104107410 - Gm24358 misc_RNA misc_RNA MGP_LPJ_T0101796.1 MGP_LPJ_G0039834.1 mouse_genomes_project 11 112600689 112601651 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0009750.1 MGP_LPJ_G0007868.1 mouse_genomes_project 11 99971375 99971482 + Mir8103 miRNA miRNA MGP_LPJ_T0009684.1 MGP_LPJ_G0007802.1 mouse_genomes_project 11 45247373 45247494 + Mir8100 miRNA miRNA MGP_LPJ_T0009720.1 MGP_LPJ_G0007838.1 mouse_genomes_project 11 71897769 71897862 - Gm22760 miRNA miRNA MGP_LPJ_T0017119.1 MGP_LPJ_G0015078.1 mouse_genomes_project 11 32578914 32698051 - 4930469K13Rik processed_transcript processed_transcript MGP_LPJ_T0009704.1 MGP_LPJ_G0007822.1 mouse_genomes_project 11 65796272 65796371 - Gm25991 miRNA miRNA MGP_LPJ_T0030736.1 MGP_LPJ_G0018642.1 mouse_genomes_project 11 78222843 78320062 - MGP_LPJ_P0030736 Cpd protein_coding protein_coding MGP_LPJ_T0030737.1 MGP_LPJ_G0018642.1 mouse_genomes_project 11 78234098 78238976 - Cpd protein_coding retained_intron MGP_LPJ_T0030738.1 MGP_LPJ_G0018642.1 mouse_genomes_project 11 78260887 78263984 - Cpd protein_coding retained_intron MGP_LPJ_T0030447.1 MGP_LPJ_G0018559.1 mouse_genomes_project 11 74371365 74372884 - MGP_LPJ_P0030447 Emc6 protein_coding protein_coding MGP_LPJ_T0030448.1 MGP_LPJ_G0018559.1 mouse_genomes_project 11 74372182 74372849 - MGP_LPJ_P0030448 Emc6 protein_coding protein_coding MGP_LPJ_T0032530.1 MGP_LPJ_G0019114.1 mouse_genomes_project 11 105328741 105346818 - MGP_LPJ_P0032530 Meox1 protein_coding protein_coding MGP_LPJ_T0012629.1 MGP_LPJ_G0010720.1 mouse_genomes_project 11 61653629 61654346 - processed_pseudogene processed_pseudogene MGP_LPJ_T0032985.1 MGP_LPJ_G0019210.1 mouse_genomes_project 11 110129825 110226753 - MGP_LPJ_P0032985 Ern1 protein_coding protein_coding MGP_LPJ_T0032986.1 MGP_LPJ_G0019210.1 mouse_genomes_project 11 110132626 110226809 - Ern1 protein_coding processed_transcript MGP_LPJ_T0032987.1 MGP_LPJ_G0019210.1 mouse_genomes_project 11 110148941 110226793 - MGP_LPJ_P0032987 Ern1 protein_coding protein_coding MGP_LPJ_T0032988.1 MGP_LPJ_G0019210.1 mouse_genomes_project 11 110170205 110226765 - MGP_LPJ_P0032988 Ern1 protein_coding protein_coding MGP_LPJ_T0032989.1 MGP_LPJ_G0019210.1 mouse_genomes_project 11 110195986 110226760 - MGP_LPJ_P0032989 Ern1 protein_coding protein_coding MGP_LPJ_T0100148.1 MGP_LPJ_G0038411.1 mouse_genomes_project 11 58959215 58959347 + Gm22599 snoRNA snoRNA MGP_LPJ_T0009714.1 MGP_LPJ_G0007832.1 mouse_genomes_project 11 71087998 71088087 + Mir324 miRNA miRNA MGP_LPJ_T0029993.1 MGP_LPJ_G0018469.1 mouse_genomes_project 11 70937342 70940494 - MGP_LPJ_P0029993 Kctd11 protein_coding protein_coding MGP_LPJ_T0029412.1 MGP_LPJ_G0018339.1 mouse_genomes_project 11 61437049 61457853 + MGP_LPJ_P0029412 Map2k3 protein_coding protein_coding MGP_LPJ_T0029413.1 MGP_LPJ_G0018339.1 mouse_genomes_project 11 61437070 61452594 + Map2k3 protein_coding retained_intron MGP_LPJ_T0029414.1 MGP_LPJ_G0018339.1 mouse_genomes_project 11 61437070 61447117 + Map2k3 protein_coding retained_intron MGP_LPJ_T0029415.1 MGP_LPJ_G0018339.1 mouse_genomes_project 11 61437082 61457836 + MGP_LPJ_P0029415 Map2k3 protein_coding nonsense_mediated_decay MGP_LPJ_T0029416.1 MGP_LPJ_G0018339.1 mouse_genomes_project 11 61446880 61451774 + Map2k3 protein_coding processed_transcript MGP_LPJ_T0029417.1 MGP_LPJ_G0018339.1 mouse_genomes_project 11 61455701 61456861 + Map2k3 protein_coding retained_intron MGP_LPJ_T0012549.1 MGP_LPJ_G0010640.1 mouse_genomes_project 11 30614703 30615400 + processed_pseudogene processed_pseudogene MGP_LPJ_T0031096.1 MGP_LPJ_G0018722.1 mouse_genomes_project 11 83622965 83628708 + 5530401A14Rik protein_coding processed_transcript MGP_LPJ_T0031097.1 MGP_LPJ_G0018722.1 mouse_genomes_project 11 83622971 83658726 + MGP_LPJ_P0031097 5530401A14Rik protein_coding protein_coding MGP_LPJ_T0031658.1 MGP_LPJ_G0018865.1 mouse_genomes_project 11 97204934 97255467 - MGP_LPJ_P0031658 Acsf2 protein_coding protein_coding MGP_LPJ_T0031659.1 MGP_LPJ_G0018865.1 mouse_genomes_project 11 97207010 97211877 - Acsf2 protein_coding processed_transcript MGP_LPJ_T0031661.1 MGP_LPJ_G0018865.1 mouse_genomes_project 11 97217273 97255366 - MGP_LPJ_P0031661 Acsf2 protein_coding unknown_likely_coding MGP_LPJ_T0031662.1 MGP_LPJ_G0018865.1 mouse_genomes_project 11 97217285 97219951 - Acsf2 protein_coding processed_transcript MGP_LPJ_T0031663.1 MGP_LPJ_G0018865.1 mouse_genomes_project 11 97219463 97255365 - Acsf2 protein_coding processed_transcript MGP_LPJ_T0027676.1 MGP_LPJ_G0017881.1 mouse_genomes_project 11 1058615 1072105 + Sec14l4 protein_coding processed_transcript MGP_LPJ_T0027677.1 MGP_LPJ_G0017881.1 mouse_genomes_project 11 1058618 1073371 + Sec14l4 protein_coding processed_transcript MGP_LPJ_T0027678.1 MGP_LPJ_G0017881.1 mouse_genomes_project 11 1058765 1072991 + Sec14l4 protein_coding processed_transcript MGP_LPJ_T0027679.1 MGP_LPJ_G0017881.1 mouse_genomes_project 11 1058935 1076580 + Sec14l4 protein_coding processed_transcript MGP_LPJ_T0027680.1 MGP_LPJ_G0017881.1 mouse_genomes_project 11 1058935 1078271 + Sec14l4 protein_coding processed_transcript MGP_LPJ_T0027681.1 MGP_LPJ_G0017881.1 mouse_genomes_project 11 1058935 1078271 + MGP_LPJ_P0027681 Sec14l4 protein_coding protein_coding MGP_LPJ_T0027682.1 MGP_LPJ_G0017881.1 mouse_genomes_project 11 1058994 1076580 + Sec14l4 protein_coding processed_transcript MGP_LPJ_T0027683.1 MGP_LPJ_G0017881.1 mouse_genomes_project 11 1068865 1076580 + Sec14l4 protein_coding processed_transcript MGP_LPJ_T0012488.1 MGP_LPJ_G0010579.1 mouse_genomes_project 11 14579855 14584084 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006241.1 MGP_LPJ_G0005212.1 mouse_genomes_project 11 38895983 39227751 + lincRNA lincRNA MGP_LPJ_T0034005.1 MGP_LPJ_G0019415.1 mouse_genomes_project 11 125353737 125357126 - MGP_LPJ_P0034005 Arhgdia protein_coding protein_coding MGP_LPJ_T0034006.1 MGP_LPJ_G0019415.1 mouse_genomes_project 11 125353742 125357014 - MGP_LPJ_P0034006 Arhgdia protein_coding protein_coding MGP_LPJ_T0034001.1 MGP_LPJ_G0019413.1 mouse_genomes_project 11 125324445 125325599 - MGP_LPJ_P0034001 Ppp1r27 protein_coding protein_coding MGP_LPJ_T0028326.1 MGP_LPJ_G0018027.1 mouse_genomes_project 11 29244755 29252963 + MGP_LPJ_P0028326 Gpr75 protein_coding protein_coding MGP_LPJ_T0028813.1 MGP_LPJ_G0018165.1 mouse_genomes_project 11 50490008 50499808 - MGP_LPJ_P0028813 Zfp354b protein_coding protein_coding MGP_LPJ_T0028814.1 MGP_LPJ_G0018165.1 mouse_genomes_project 11 50490424 50499191 - MGP_LPJ_P0028814 Zfp354b protein_coding protein_coding MGP_LPJ_T0028815.1 MGP_LPJ_G0018165.1 mouse_genomes_project 11 50496749 50498824 - Zfp354b protein_coding processed_transcript MGP_LPJ_T0031734.1 MGP_LPJ_G0018886.1 mouse_genomes_project 11 98151636 98154770 + MGP_LPJ_P0031734 Slc35b1 protein_coding protein_coding MGP_LPJ_T0031735.1 MGP_LPJ_G0018886.1 mouse_genomes_project 11 98151770 98158656 + MGP_LPJ_P0031735 Slc35b1 protein_coding nonsense_mediated_decay MGP_LPJ_T0031736.1 MGP_LPJ_G0018886.1 mouse_genomes_project 11 98151781 98158657 + MGP_LPJ_P0031736 Slc35b1 protein_coding protein_coding MGP_LPJ_T0031737.1 MGP_LPJ_G0018886.1 mouse_genomes_project 11 98151785 98153191 + Slc35b1 protein_coding retained_intron MGP_LPJ_T0031738.1 MGP_LPJ_G0018886.1 mouse_genomes_project 11 98156864 98157533 + Slc35b1 protein_coding retained_intron MGP_LPJ_T0012730.1 MGP_LPJ_G0010821.1 mouse_genomes_project 11 103053092 103053380 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012562.1 MGP_LPJ_G0010653.1 mouse_genomes_project 11 39313607 39314162 + processed_pseudogene processed_pseudogene MGP_LPJ_T0031518.1 MGP_LPJ_G0018834.1 mouse_genomes_project 11 91324534 91357331 - MGP_LPJ_P0031518 Dgke protein_coding protein_coding MGP_LPJ_T0031519.1 MGP_LPJ_G0018834.1 mouse_genomes_project 11 91326855 91351260 - MGP_LPJ_P0031519 Dgke protein_coding protein_coding MGP_LPJ_T0031520.1 MGP_LPJ_G0018834.1 mouse_genomes_project 11 91328500 91351260 - MGP_LPJ_P0031520 Dgke protein_coding nonsense_mediated_decay MGP_LPJ_T0012713.1 MGP_LPJ_G0010804.1 mouse_genomes_project 11 96268423 96268893 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012574.1 MGP_LPJ_G0010665.1 mouse_genomes_project 11 44925469 44925858 + processed_pseudogene processed_pseudogene MGP_LPJ_T0028536.1 MGP_LPJ_G0018082.1 mouse_genomes_project 11 42481560 42497746 + MGP_LPJ_P0028536 C1qtnf2 protein_coding protein_coding MGP_LPJ_T0028537.1 MGP_LPJ_G0018082.1 mouse_genomes_project 11 42481590 42497766 + MGP_LPJ_P0028537 C1qtnf2 protein_coding protein_coding MGP_LPJ_T0028538.1 MGP_LPJ_G0018082.1 mouse_genomes_project 11 42488031 42497105 + MGP_LPJ_P0028538 C1qtnf2 protein_coding protein_coding MGP_LPJ_T0100133.1 MGP_LPJ_G0038396.1 mouse_genomes_project 11 23155119 23155247 - Gm24255 snoRNA snoRNA MGP_LPJ_T0031521.1 MGP_LPJ_G0018835.1 mouse_genomes_project 11 91366003 91382764 + MGP_LPJ_P0031521 Gm525 protein_coding protein_coding MGP_LPJ_T0031522.1 MGP_LPJ_G0018835.1 mouse_genomes_project 11 91367178 91382689 + MGP_LPJ_P0031522 Gm525 protein_coding protein_coding MGP_LPJ_T0034045.1 MGP_LPJ_G0019422.1 mouse_genomes_project 11 125417653 125425334 - MGP_LPJ_P0034045 Pycr1 protein_coding protein_coding MGP_LPJ_T0034046.1 MGP_LPJ_G0019422.1 mouse_genomes_project 11 125421084 125425412 - MGP_LPJ_P0034046 Pycr1 protein_coding protein_coding MGP_LPJ_T0034047.1 MGP_LPJ_G0019422.1 mouse_genomes_project 11 125422887 125425307 - MGP_LPJ_P0034047 Pycr1 protein_coding protein_coding MGP_LPJ_T0034048.1 MGP_LPJ_G0019422.1 mouse_genomes_project 11 125423141 125425368 - MGP_LPJ_P0034048 Pycr1 protein_coding protein_coding MGP_LPJ_T0034049.1 MGP_LPJ_G0019422.1 mouse_genomes_project 11 125423377 125425433 - MGP_LPJ_P0034049 Pycr1 protein_coding protein_coding MGP_LPJ_T0034050.1 MGP_LPJ_G0019422.1 mouse_genomes_project 11 125424408 125425368 - Pycr1 protein_coding retained_intron MGP_LPJ_T0033372.1 MGP_LPJ_G0019295.1 mouse_genomes_project 11 119989319 120009509 + MGP_LPJ_P0033372 Nup85 protein_coding protein_coding MGP_LPJ_T0033373.1 MGP_LPJ_G0019295.1 mouse_genomes_project 11 119989410 119994777 + Nup85 protein_coding processed_transcript MGP_LPJ_T0033374.1 MGP_LPJ_G0019295.1 mouse_genomes_project 11 119995000 120007367 + MGP_LPJ_P0033374 Nup85 protein_coding protein_coding MGP_LPJ_T0033375.1 MGP_LPJ_G0019295.1 mouse_genomes_project 11 120000648 120007563 + MGP_LPJ_P0033375 Nup85 protein_coding protein_coding MGP_LPJ_T0033376.1 MGP_LPJ_G0019295.1 mouse_genomes_project 11 120006027 120006943 + Nup85 protein_coding processed_transcript MGP_LPJ_T0033377.1 MGP_LPJ_G0019295.1 mouse_genomes_project 11 120006619 120007558 + Nup85 protein_coding processed_transcript MGP_LPJ_T0033378.1 MGP_LPJ_G0019295.1 mouse_genomes_project 11 120007164 120009430 + Nup85 protein_coding processed_transcript MGP_LPJ_T0033379.1 MGP_LPJ_G0019295.1 mouse_genomes_project 11 120007271 120007802 + Nup85 protein_coding processed_transcript MGP_LPJ_T0033380.1 MGP_LPJ_G0019295.1 mouse_genomes_project 11 120008580 120009307 + Nup85 protein_coding processed_transcript MGP_LPJ_T0012777.1 MGP_LPJ_G0010868.1 mouse_genomes_project 11 122541515 122541939 + processed_pseudogene processed_pseudogene MGP_LPJ_T0027742.1 MGP_LPJ_G0017897.1 mouse_genomes_project 11 1772838 1812186 + MGP_LPJ_P0027742 Zmat5 protein_coding protein_coding MGP_LPJ_T0027743.1 MGP_LPJ_G0017897.1 mouse_genomes_project 11 1772868 1811912 + Zmat5 protein_coding processed_transcript MGP_LPJ_T0027744.1 MGP_LPJ_G0017897.1 mouse_genomes_project 11 1801176 1805123 + Zmat5 protein_coding processed_transcript MGP_LPJ_T0012737.1 MGP_LPJ_G0010828.1 mouse_genomes_project 11 105996793 105996964 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003303.1 MGP_LPJ_G0003051.1 mouse_genomes_project 11 100688960 100691021 + Gm11614 antisense antisense MGP_LPJ_T0029496.1 MGP_LPJ_G0018352.1 mouse_genomes_project 11 62198891 62217972 + MGP_LPJ_P0029496 Grap protein_coding protein_coding MGP_LPJ_T0029497.1 MGP_LPJ_G0018352.1 mouse_genomes_project 11 62214245 62215080 + Grap protein_coding processed_transcript MGP_LPJ_T0031511.1 MGP_LPJ_G0018831.1 mouse_genomes_project 11 91233968 91236270 - MGP_LPJ_P0031511 Gm15698 protein_coding protein_coding MGP_LPJ_T0033393.1 MGP_LPJ_G0019297.1 mouse_genomes_project 11 120031039 120035156 + MGP_LPJ_P0033393 Mrps7 protein_coding protein_coding MGP_LPJ_T0033394.1 MGP_LPJ_G0019297.1 mouse_genomes_project 11 120031981 120034116 + Mrps7 protein_coding processed_transcript MGP_LPJ_T0017227.1 MGP_LPJ_G0015135.1 mouse_genomes_project 11 123123357 123126423 - Gm11748 processed_transcript processed_transcript MGP_LPJ_T0011321.1 MGP_LPJ_G0009439.1 mouse_genomes_project 11 73954430 73954622 - Gm22075 misc_RNA misc_RNA MGP_LPJ_T0006355.1 MGP_LPJ_G0005298.1 mouse_genomes_project 11 103588396 103590437 + Gm12349 lincRNA lincRNA MGP_LPJ_T0031696.1 MGP_LPJ_G0018877.1 mouse_genomes_project 11 97736200 97752119 + MGP_LPJ_P0031696 Ppp1r9b protein_coding protein_coding MGP_LPJ_T0031697.1 MGP_LPJ_G0018877.1 mouse_genomes_project 11 97738045 97746492 + Ppp1r9b protein_coding processed_transcript MGP_LPJ_T0031698.1 MGP_LPJ_G0018877.1 mouse_genomes_project 11 97741229 97752119 + MGP_LPJ_P0031698 Ppp1r9b protein_coding protein_coding MGP_LPJ_T0031264.1 MGP_LPJ_G0018776.1 mouse_genomes_project 11 86808391 86850080 - MGP_LPJ_P0031264 Ggnbp2 protein_coding protein_coding MGP_LPJ_T0031265.1 MGP_LPJ_G0018776.1 mouse_genomes_project 11 86808391 86850052 - MGP_LPJ_P0031265 Ggnbp2 protein_coding protein_coding MGP_LPJ_T0031266.1 MGP_LPJ_G0018776.1 mouse_genomes_project 11 86808391 86850001 - MGP_LPJ_P0031266 Ggnbp2 protein_coding protein_coding MGP_LPJ_T0031267.1 MGP_LPJ_G0018776.1 mouse_genomes_project 11 86808836 86849484 - MGP_LPJ_P0031267 Ggnbp2 protein_coding protein_coding MGP_LPJ_T0031268.1 MGP_LPJ_G0018776.1 mouse_genomes_project 11 86808891 86849909 - MGP_LPJ_P0031268 Ggnbp2 protein_coding protein_coding MGP_LPJ_T0031269.1 MGP_LPJ_G0018776.1 mouse_genomes_project 11 86809002 86850003 - MGP_LPJ_P0031269 Ggnbp2 protein_coding protein_coding MGP_LPJ_T0031270.1 MGP_LPJ_G0018776.1 mouse_genomes_project 11 86810166 86812473 - MGP_LPJ_P0031270 Ggnbp2 protein_coding protein_coding MGP_LPJ_T0031271.1 MGP_LPJ_G0018776.1 mouse_genomes_project 11 86810542 86849988 - MGP_LPJ_P0031271 Ggnbp2 protein_coding protein_coding MGP_LPJ_T0031272.1 MGP_LPJ_G0018776.1 mouse_genomes_project 11 86812425 86813989 - Ggnbp2 protein_coding processed_transcript MGP_LPJ_T0031273.1 MGP_LPJ_G0018776.1 mouse_genomes_project 11 86830373 86836505 - Ggnbp2 protein_coding processed_transcript MGP_LPJ_T0031274.1 MGP_LPJ_G0018776.1 mouse_genomes_project 11 86831980 86838680 - Ggnbp2 protein_coding retained_intron MGP_LPJ_T0031275.1 MGP_LPJ_G0018776.1 mouse_genomes_project 11 86838739 86849754 - MGP_LPJ_P0031275 Ggnbp2 protein_coding protein_coding MGP_LPJ_T0031276.1 MGP_LPJ_G0018776.1 mouse_genomes_project 11 86848161 86850042 - Ggnbp2 protein_coding processed_transcript MGP_LPJ_T0029482.1 MGP_LPJ_G0018351.1 mouse_genomes_project 11 62052242 62115080 - MGP_LPJ_P0029482 Epn2 protein_coding protein_coding MGP_LPJ_T0029483.1 MGP_LPJ_G0018351.1 mouse_genomes_project 11 62052242 62115064 - MGP_LPJ_P0029483 Epn2 protein_coding protein_coding MGP_LPJ_T0029484.1 MGP_LPJ_G0018351.1 mouse_genomes_project 11 62052242 62115064 - MGP_LPJ_P0029484 Epn2 protein_coding protein_coding MGP_LPJ_T0029485.1 MGP_LPJ_G0018351.1 mouse_genomes_project 11 62052242 62115080 - MGP_LPJ_P0029485 Epn2 protein_coding protein_coding MGP_LPJ_T0029486.1 MGP_LPJ_G0018351.1 mouse_genomes_project 11 62052243 62115082 - MGP_LPJ_P0029486 Epn2 protein_coding protein_coding MGP_LPJ_T0029487.1 MGP_LPJ_G0018351.1 mouse_genomes_project 11 62052243 62115082 - MGP_LPJ_P0029487 Epn2 protein_coding protein_coding MGP_LPJ_T0029488.1 MGP_LPJ_G0018351.1 mouse_genomes_project 11 62054412 62087799 - MGP_LPJ_P0029488 Epn2 protein_coding unknown_likely_coding MGP_LPJ_T0029489.1 MGP_LPJ_G0018351.1 mouse_genomes_project 11 62058161 62081332 - MGP_LPJ_P0029489 Epn2 protein_coding protein_coding MGP_LPJ_T0029490.1 MGP_LPJ_G0018351.1 mouse_genomes_project 11 62067641 62079269 - MGP_LPJ_P0029490 Epn2 protein_coding protein_coding MGP_LPJ_T0029491.1 MGP_LPJ_G0018351.1 mouse_genomes_project 11 62069373 62081501 - Epn2 protein_coding retained_intron MGP_LPJ_T0029492.1 MGP_LPJ_G0018351.1 mouse_genomes_project 11 62081464 62115053 - MGP_LPJ_P0029492 Epn2 protein_coding protein_coding MGP_LPJ_T0029493.1 MGP_LPJ_G0018351.1 mouse_genomes_project 11 62081650 62115053 - MGP_LPJ_P0029493 Epn2 protein_coding protein_coding MGP_LPJ_T0029494.1 MGP_LPJ_G0018351.1 mouse_genomes_project 11 62081707 62115057 - Epn2 protein_coding processed_transcript MGP_LPJ_T0029495.1 MGP_LPJ_G0018351.1 mouse_genomes_project 11 62089660 62115065 - Epn2 protein_coding processed_transcript MGP_LPJ_T0030276.1 MGP_LPJ_G0018522.1 mouse_genomes_project 11 71988397 72097451 + MGP_LPJ_P0030276 Rabep1 protein_coding protein_coding MGP_LPJ_T0030277.1 MGP_LPJ_G0018522.1 mouse_genomes_project 11 71988401 72095641 + Rabep1 protein_coding retained_intron MGP_LPJ_T0030278.1 MGP_LPJ_G0018522.1 mouse_genomes_project 11 71988411 72043212 + MGP_LPJ_P0030278 Rabep1 protein_coding protein_coding MGP_LPJ_T0030279.1 MGP_LPJ_G0018522.1 mouse_genomes_project 11 71988418 72095636 + MGP_LPJ_P0030279 Rabep1 protein_coding protein_coding MGP_LPJ_T0030280.1 MGP_LPJ_G0018522.1 mouse_genomes_project 11 71988544 72095278 + MGP_LPJ_P0030280 Rabep1 protein_coding protein_coding MGP_LPJ_T0030281.1 MGP_LPJ_G0018522.1 mouse_genomes_project 11 71988561 72094984 + MGP_LPJ_P0030281 Rabep1 protein_coding protein_coding MGP_LPJ_T0030282.1 MGP_LPJ_G0018522.1 mouse_genomes_project 11 71988594 72094822 + MGP_LPJ_P0030282 Rabep1 protein_coding protein_coding MGP_LPJ_T0030283.1 MGP_LPJ_G0018522.1 mouse_genomes_project 11 71988594 72094822 + MGP_LPJ_P0030283 Rabep1 protein_coding protein_coding MGP_LPJ_T0101255.1 MGP_LPJ_G0039498.1 mouse_genomes_project 11 121999608 122000689 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101256.1 MGP_LPJ_G0039498.1 mouse_genomes_project 11 121999667 122000099 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0012519.1 MGP_LPJ_G0010610.1 mouse_genomes_project 11 20583697 20585124 - processed_pseudogene processed_pseudogene MGP_LPJ_T0031328.1 MGP_LPJ_G0018788.1 mouse_genomes_project 11 87920300 87950521 + MGP_LPJ_P0031328 Tbx4 protein_coding protein_coding MGP_LPJ_T0031329.1 MGP_LPJ_G0018788.1 mouse_genomes_project 11 87923940 87950523 + MGP_LPJ_P0031329 Tbx4 protein_coding protein_coding MGP_LPJ_T0031330.1 MGP_LPJ_G0018788.1 mouse_genomes_project 11 87931469 87950521 + MGP_LPJ_P0031330 Tbx4 protein_coding protein_coding MGP_LPJ_T0033074.1 MGP_LPJ_G0019227.1 mouse_genomes_project 11 111811053 112241563 - MGP_LPJ_P0033074 Prkca protein_coding protein_coding MGP_LPJ_T0033075.1 MGP_LPJ_G0019227.1 mouse_genomes_project 11 111815872 111860741 - MGP_LPJ_P0033075 Prkca protein_coding protein_coding MGP_LPJ_T0033076.1 MGP_LPJ_G0019227.1 mouse_genomes_project 11 111859496 111897608 - Prkca protein_coding processed_transcript MGP_LPJ_T0033077.1 MGP_LPJ_G0019227.1 mouse_genomes_project 11 112087523 112241283 - Prkca protein_coding processed_transcript MGP_LPJ_T0012618.1 MGP_LPJ_G0010709.1 mouse_genomes_project 11 58989513 58990529 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012773.1 MGP_LPJ_G0010864.1 mouse_genomes_project 11 120874977 120875434 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098915.1 MGP_LPJ_G0037178.1 mouse_genomes_project 11 73142388 73142491 + Gm23226 snRNA snRNA MGP_LPJ_T0028128.1 MGP_LPJ_G0017986.1 mouse_genomes_project 11 19806866 20095808 - MGP_LPJ_P0028128 Ehbp1 protein_coding protein_coding MGP_LPJ_T0028129.1 MGP_LPJ_G0017986.1 mouse_genomes_project 11 19806868 20096765 - MGP_LPJ_P0028129 Ehbp1 protein_coding protein_coding MGP_LPJ_T0028130.1 MGP_LPJ_G0017986.1 mouse_genomes_project 11 19806868 20096765 - MGP_LPJ_P0028130 Ehbp1 protein_coding protein_coding MGP_LPJ_T0028131.1 MGP_LPJ_G0017986.1 mouse_genomes_project 11 19916210 19979088 - Ehbp1 protein_coding processed_transcript MGP_LPJ_T0028132.1 MGP_LPJ_G0017986.1 mouse_genomes_project 11 19952140 20095842 - MGP_LPJ_P0028132 Ehbp1 protein_coding protein_coding MGP_LPJ_T0028133.1 MGP_LPJ_G0017986.1 mouse_genomes_project 11 19975118 19977492 - Ehbp1 protein_coding processed_transcript MGP_LPJ_T0028134.1 MGP_LPJ_G0017986.1 mouse_genomes_project 11 20039183 20157054 - Ehbp1 protein_coding processed_transcript MGP_LPJ_T0028613.1 MGP_LPJ_G0018105.1 mouse_genomes_project 11 45705172 45720613 + MGP_LPJ_P0028613 Gm12169 protein_coding protein_coding MGP_LPJ_T0012735.1 MGP_LPJ_G0010826.1 mouse_genomes_project 11 105395212 105395611 + processed_pseudogene processed_pseudogene MGP_LPJ_T0033950.1 MGP_LPJ_G0019402.1 mouse_genomes_project 11 125139391 125201603 - MGP_LPJ_P0033950 Nploc4 protein_coding protein_coding MGP_LPJ_T0033951.1 MGP_LPJ_G0019402.1 mouse_genomes_project 11 125139391 125201603 - MGP_LPJ_P0033951 Nploc4 protein_coding protein_coding MGP_LPJ_T0033952.1 MGP_LPJ_G0019402.1 mouse_genomes_project 11 125141339 125142525 - Nploc4 protein_coding processed_transcript MGP_LPJ_T0033953.1 MGP_LPJ_G0019402.1 mouse_genomes_project 11 125167085 125184926 - Nploc4 protein_coding processed_transcript MGP_LPJ_T0033954.1 MGP_LPJ_G0019402.1 mouse_genomes_project 11 125176452 125180381 - Nploc4 protein_coding processed_transcript MGP_LPJ_T0029244.1 MGP_LPJ_G0018300.1 mouse_genomes_project 11 59615953 59623137 + MGP_LPJ_P0029244 Mrpl55 protein_coding protein_coding MGP_LPJ_T0029245.1 MGP_LPJ_G0018300.1 mouse_genomes_project 11 59615956 59623098 + MGP_LPJ_P0029245 Mrpl55 protein_coding protein_coding MGP_LPJ_T0029246.1 MGP_LPJ_G0018300.1 mouse_genomes_project 11 59615959 59623344 + MGP_LPJ_P0029246 Mrpl55 protein_coding protein_coding MGP_LPJ_T0029247.1 MGP_LPJ_G0018300.1 mouse_genomes_project 11 59615972 59623212 + MGP_LPJ_P0029247 Mrpl55 protein_coding protein_coding MGP_LPJ_T0029248.1 MGP_LPJ_G0018300.1 mouse_genomes_project 11 59616005 59623098 + MGP_LPJ_P0029248 Mrpl55 protein_coding protein_coding MGP_LPJ_T0003321.1 MGP_LPJ_G0003064.1 mouse_genomes_project 11 105338662 105343646 + Gm11551 antisense antisense MGP_LPJ_T0032715.1 MGP_LPJ_G0019145.1 mouse_genomes_project 11 106340992 106364971 - MGP_LPJ_P0032715 Gjc1 protein_coding protein_coding MGP_LPJ_T0032716.1 MGP_LPJ_G0019145.1 mouse_genomes_project 11 106340992 106347079 - MGP_LPJ_P0032716 Gjc1 protein_coding protein_coding MGP_LPJ_T0032717.1 MGP_LPJ_G0019145.1 mouse_genomes_project 11 106340992 106364450 - MGP_LPJ_P0032717 Gjc1 protein_coding protein_coding MGP_LPJ_T0032718.1 MGP_LPJ_G0019145.1 mouse_genomes_project 11 106342147 106347974 - Gjc1 protein_coding retained_intron MGP_LPJ_T0032719.1 MGP_LPJ_G0019145.1 mouse_genomes_project 11 106342592 106364481 - Gjc1 protein_coding processed_transcript MGP_LPJ_T0030590.1 MGP_LPJ_G0018610.1 mouse_genomes_project 11 76521088 76597471 + MGP_LPJ_P0030590 Rtn4rl1 protein_coding protein_coding MGP_LPJ_T0003253.1 MGP_LPJ_G0003013.1 mouse_genomes_project 11 80607176 80615879 + Gm11201 antisense antisense MGP_LPJ_T0028870.1 MGP_LPJ_G0018183.1 mouse_genomes_project 11 51359068 51362549 - MGP_LPJ_P0028870 0610009B22Rik protein_coding protein_coding MGP_LPJ_T0028871.1 MGP_LPJ_G0018183.1 mouse_genomes_project 11 51359068 51362328 - MGP_LPJ_P0028871 0610009B22Rik protein_coding protein_coding MGP_LPJ_T0028185.1 MGP_LPJ_G0017998.1 mouse_genomes_project 11 21376354 21381917 - MGP_LPJ_P0028185 1700093K21Rik protein_coding protein_coding MGP_LPJ_T0028186.1 MGP_LPJ_G0017998.1 mouse_genomes_project 11 21376354 21381197 - MGP_LPJ_P0028186 1700093K21Rik protein_coding protein_coding MGP_LPJ_T0028187.1 MGP_LPJ_G0017998.1 mouse_genomes_project 11 21380761 21381917 - MGP_LPJ_P0028187 1700093K21Rik protein_coding protein_coding MGP_LPJ_T0028188.1 MGP_LPJ_G0017998.1 mouse_genomes_project 11 21380790 21383133 - MGP_LPJ_P0028188 1700093K21Rik protein_coding protein_coding MGP_LPJ_T0098117.1 MGP_LPJ_G0036398.1 mouse_genomes_project 11 57902550 57902669 + n-R5s69 rRNA rRNA MGP_LPJ_T0098932.1 MGP_LPJ_G0037195.1 mouse_genomes_project 11 89521158 89521322 + Rnu1a1 snRNA snRNA MGP_LPJ_T0031163.1 MGP_LPJ_G0018747.1 mouse_genomes_project 11 85172952 85177287 - MGP_LPJ_P0031163 Pex12 protein_coding protein_coding MGP_LPJ_T0031164.1 MGP_LPJ_G0018747.1 mouse_genomes_project 11 85173385 85177205 - MGP_LPJ_P0031164 Pex12 protein_coding protein_coding MGP_LPJ_T0031165.1 MGP_LPJ_G0018747.1 mouse_genomes_project 11 85173385 85177252 - MGP_LPJ_P0031165 Pex12 protein_coding protein_coding MGP_LPJ_T0031166.1 MGP_LPJ_G0018747.1 mouse_genomes_project 11 85173386 85177207 - MGP_LPJ_P0031166 Pex12 protein_coding protein_coding MGP_LPJ_T0031167.1 MGP_LPJ_G0018747.1 mouse_genomes_project 11 85176213 85177248 - Pex12 protein_coding processed_transcript MGP_LPJ_T0031168.1 MGP_LPJ_G0018747.1 mouse_genomes_project 11 85176339 85180893 - MGP_LPJ_P0031168 Pex12 protein_coding protein_coding MGP_LPJ_T0031169.1 MGP_LPJ_G0018747.1 mouse_genomes_project 11 85176638 85177268 - MGP_LPJ_P0031169 Pex12 protein_coding protein_coding MGP_LPJ_T0032105.1 MGP_LPJ_G0018979.1 mouse_genomes_project 11 101902817 101924973 + MGP_LPJ_P0032105 Rapgefl1 protein_coding protein_coding MGP_LPJ_T0032106.1 MGP_LPJ_G0018979.1 mouse_genomes_project 11 101912783 101915059 + Rapgefl1 protein_coding retained_intron MGP_LPJ_T0032107.1 MGP_LPJ_G0018979.1 mouse_genomes_project 11 101921631 101924275 + Rapgefl1 protein_coding retained_intron MGP_LPJ_T0029973.1 MGP_LPJ_G0018463.1 mouse_genomes_project 11 70866058 70867363 - MGP_LPJ_P0029973 Spem1 protein_coding protein_coding MGP_LPJ_T0029144.1 MGP_LPJ_G0018255.1 mouse_genomes_project 11 58382654 58387175 + Mrpl22 protein_coding processed_transcript MGP_LPJ_T0029145.1 MGP_LPJ_G0018255.1 mouse_genomes_project 11 58382664 58390480 + MGP_LPJ_P0029145 Mrpl22 protein_coding unknown_likely_coding MGP_LPJ_T0029146.1 MGP_LPJ_G0018255.1 mouse_genomes_project 11 58382667 58388253 + Mrpl22 protein_coding processed_transcript MGP_LPJ_T0012624.1 MGP_LPJ_G0010715.1 mouse_genomes_project 11 60930873 60931315 + processed_pseudogene processed_pseudogene MGP_LPJ_T0028658.1 MGP_LPJ_G0018121.1 mouse_genomes_project 11 48335515 48514432 + MGP_LPJ_P0028658 Olfr56 protein_coding protein_coding MGP_LPJ_T0028659.1 MGP_LPJ_G0018121.1 mouse_genomes_project 11 48335515 48514432 + MGP_LPJ_P0028659 Olfr56 protein_coding protein_coding MGP_LPJ_T0028660.1 MGP_LPJ_G0018121.1 mouse_genomes_project 11 48407357 48514432 + MGP_LPJ_P0028660 Olfr56 protein_coding protein_coding MGP_LPJ_T0028664.1 MGP_LPJ_G0018121.1 mouse_genomes_project 11 48465247 48505504 + Olfr56 protein_coding retained_intron MGP_LPJ_T0028666.1 MGP_LPJ_G0018121.1 mouse_genomes_project 11 48465265 48514365 + MGP_LPJ_P0028666 Olfr56 protein_coding protein_coding MGP_LPJ_T0028669.1 MGP_LPJ_G0018121.1 mouse_genomes_project 11 48497095 48514364 + MGP_LPJ_P0028669 Olfr56 protein_coding protein_coding MGP_LPJ_T0029912.1 MGP_LPJ_G0018448.1 mouse_genomes_project 11 70677889 70679303 + MGP_LPJ_P0029912 Sox15 protein_coding protein_coding MGP_LPJ_T0029099.1 MGP_LPJ_G0018240.1 mouse_genomes_project 11 55382933 55409764 - MGP_LPJ_P0029099 Sparc protein_coding protein_coding MGP_LPJ_T0029100.1 MGP_LPJ_G0018240.1 mouse_genomes_project 11 55382933 55409946 - MGP_LPJ_P0029100 Sparc protein_coding protein_coding MGP_LPJ_T0029101.1 MGP_LPJ_G0018240.1 mouse_genomes_project 11 55383817 55388103 - Sparc protein_coding processed_transcript MGP_LPJ_T0029102.1 MGP_LPJ_G0018240.1 mouse_genomes_project 11 55383950 55390537 - Sparc protein_coding processed_transcript MGP_LPJ_T0029103.1 MGP_LPJ_G0018240.1 mouse_genomes_project 11 55387780 55409764 - MGP_LPJ_P0029103 Sparc protein_coding protein_coding MGP_LPJ_T0029104.1 MGP_LPJ_G0018240.1 mouse_genomes_project 11 55397586 55409766 - Sparc protein_coding processed_transcript MGP_LPJ_T0100157.1 MGP_LPJ_G0038420.1 mouse_genomes_project 11 70693642 70693786 - Gm22988 snoRNA snoRNA MGP_LPJ_T0031204.1 MGP_LPJ_G0018759.1 mouse_genomes_project 11 85553478 85554990 - MGP_LPJ_P0031204 Ccl3 protein_coding protein_coding MGP_LPJ_T0032379.1 MGP_LPJ_G0019083.1 mouse_genomes_project 11 104481497 104488346 + MGP_LPJ_P0032379 Tubg1 protein_coding protein_coding MGP_LPJ_T0032380.1 MGP_LPJ_G0019083.1 mouse_genomes_project 11 104486059 104487755 + Tubg1 protein_coding processed_transcript MGP_LPJ_T0003356.1 MGP_LPJ_G0003094.1 mouse_genomes_project 11 113938609 113940429 + Gm11697 antisense antisense MGP_LPJ_T0100189.1 MGP_LPJ_G0038452.1 mouse_genomes_project 11 124479503 124479583 + Gm23663 snoRNA snoRNA MGP_LPJ_T0011808.1 MGP_LPJ_G0009924.1 mouse_genomes_project 11 60059907 60061167 + MGP_LPJ_P0011808 Olfr225 polymorphic_pseudogene polymorphic_pseudogene MGP_LPJ_T0032698.1 MGP_LPJ_G0019142.1 mouse_genomes_project 11 106193024 106205289 + MGP_LPJ_P0032698 Meioc protein_coding protein_coding MGP_LPJ_T0032699.1 MGP_LPJ_G0019142.1 mouse_genomes_project 11 106194898 106213046 + MGP_LPJ_P0032699 Meioc protein_coding protein_coding MGP_LPJ_T0032700.1 MGP_LPJ_G0019142.1 mouse_genomes_project 11 106194933 106204105 + Meioc protein_coding processed_transcript MGP_LPJ_T0012524.1 MGP_LPJ_G0010615.1 mouse_genomes_project 11 24688561 24689030 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012584.1 MGP_LPJ_G0010675.1 mouse_genomes_project 11 48827767 48828679 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012761.1 MGP_LPJ_G0010852.1 mouse_genomes_project 11 115714494 115714984 - processed_pseudogene processed_pseudogene MGP_LPJ_T0033268.1 MGP_LPJ_G0019270.1 mouse_genomes_project 11 119357928 119365292 - MGP_LPJ_P0033268 protein_coding protein_coding MGP_LPJ_T0027658.1 MGP_LPJ_G0017875.1 mouse_genomes_project 11 886497 892449 + MGP_LPJ_P0027658 Dusp18 protein_coding protein_coding MGP_LPJ_T0027659.1 MGP_LPJ_G0017875.1 mouse_genomes_project 11 886497 894391 + MGP_LPJ_P0027659 Dusp18 protein_coding protein_coding MGP_LPJ_T0033895.1 MGP_LPJ_G0019392.1 mouse_genomes_project 11 124746506 124789872 - Aatk protein_coding processed_transcript MGP_LPJ_T0033896.1 MGP_LPJ_G0019392.1 mouse_genomes_project 11 124746506 124751602 - Aatk protein_coding processed_transcript MGP_LPJ_T0033897.1 MGP_LPJ_G0019392.1 mouse_genomes_project 11 124746506 124789775 - MGP_LPJ_P0033897 Aatk protein_coding protein_coding MGP_LPJ_T0033898.1 MGP_LPJ_G0019392.1 mouse_genomes_project 11 124748409 124764437 - MGP_LPJ_P0033898 Aatk protein_coding protein_coding MGP_LPJ_T0033899.1 MGP_LPJ_G0019392.1 mouse_genomes_project 11 124751588 124758260 - Aatk protein_coding processed_transcript MGP_LPJ_T0033900.1 MGP_LPJ_G0019392.1 mouse_genomes_project 11 124752879 124758519 - Aatk protein_coding processed_transcript MGP_LPJ_T0033901.1 MGP_LPJ_G0019392.1 mouse_genomes_project 11 124756183 124758235 - Aatk protein_coding processed_transcript MGP_LPJ_T0033902.1 MGP_LPJ_G0019392.1 mouse_genomes_project 11 124758100 124761529 - Aatk protein_coding processed_transcript MGP_LPJ_T0033955.1 MGP_LPJ_G0019403.1 mouse_genomes_project 11 125206997 125211286 + MGP_LPJ_P0033955 Tspan10 protein_coding protein_coding MGP_LPJ_T0033956.1 MGP_LPJ_G0019403.1 mouse_genomes_project 11 125207024 125208659 + Tspan10 protein_coding processed_transcript MGP_LPJ_T0101771.1 MGP_LPJ_G0039809.1 mouse_genomes_project 11 74853015 74856308 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0031915.1 MGP_LPJ_G0018935.1 mouse_genomes_project 11 100353942 100445000 + MGP_LPJ_P0031915 Arhgap23 protein_coding protein_coding MGP_LPJ_T0031916.1 MGP_LPJ_G0018935.1 mouse_genomes_project 11 100354014 100434277 + MGP_LPJ_P0031916 Arhgap23 protein_coding unknown_likely_coding MGP_LPJ_T0031917.1 MGP_LPJ_G0018935.1 mouse_genomes_project 11 100378952 100386896 + Arhgap23 protein_coding processed_transcript MGP_LPJ_T0031918.1 MGP_LPJ_G0018935.1 mouse_genomes_project 11 100392827 100444998 + MGP_LPJ_P0031918 Arhgap23 protein_coding protein_coding MGP_LPJ_T0031919.1 MGP_LPJ_G0018935.1 mouse_genomes_project 11 100394797 100445000 + MGP_LPJ_P0031919 Arhgap23 protein_coding nonsense_mediated_decay MGP_LPJ_T0031921.1 MGP_LPJ_G0018935.1 mouse_genomes_project 11 100433757 100444996 + MGP_LPJ_P0031921 Arhgap23 protein_coding protein_coding MGP_LPJ_T0028453.1 MGP_LPJ_G0018063.1 mouse_genomes_project 11 33416731 33442097 - MGP_LPJ_P0028453 Spdl1 protein_coding protein_coding MGP_LPJ_T0028454.1 MGP_LPJ_G0018063.1 mouse_genomes_project 11 33417236 33439122 - MGP_LPJ_P0028454 Spdl1 protein_coding unknown_likely_coding MGP_LPJ_T0028455.1 MGP_LPJ_G0018063.1 mouse_genomes_project 11 33430320 33432231 - Spdl1 protein_coding retained_intron MGP_LPJ_T0028456.1 MGP_LPJ_G0018063.1 mouse_genomes_project 11 33438575 33442048 - Spdl1 protein_coding retained_intron MGP_LPJ_T0009692.1 MGP_LPJ_G0007810.1 mouse_genomes_project 11 51832429 51832520 + Mir3061 miRNA miRNA MGP_LPJ_T0009707.1 MGP_LPJ_G0007825.1 mouse_genomes_project 11 69133847 69133967 + Mir6406 miRNA miRNA MGP_LPJ_T0029610.1 MGP_LPJ_G0018373.1 mouse_genomes_project 11 63501579 63517149 + MGP_LPJ_P0029610 Tvp23b protein_coding protein_coding MGP_LPJ_T0029611.1 MGP_LPJ_G0018373.1 mouse_genomes_project 11 63501614 63514009 + Tvp23b protein_coding processed_transcript MGP_LPJ_T0029612.1 MGP_LPJ_G0018373.1 mouse_genomes_project 11 63501738 63507312 + Tvp23b protein_coding processed_transcript MGP_LPJ_T0029613.1 MGP_LPJ_G0018373.1 mouse_genomes_project 11 63505773 63538461 + Tvp23b protein_coding processed_transcript MGP_LPJ_T0027949.1 MGP_LPJ_G0017941.1 mouse_genomes_project 11 4053905 4055949 - Gm11983 protein_coding translated_processed_pseudogene MGP_LPJ_T0027950.1 MGP_LPJ_G0017941.1 mouse_genomes_project 11 4055102 4055420 - MGP_LPJ_P0027950 Gm11983 protein_coding protein_coding MGP_LPJ_T0030652.1 MGP_LPJ_G0018623.1 mouse_genomes_project 11 76999206 77022996 + MGP_LPJ_P0030652 Myo1c protein_coding protein_coding MGP_LPJ_T0030653.1 MGP_LPJ_G0018623.1 mouse_genomes_project 11 77004870 77018673 + Myo1c protein_coding retained_intron MGP_LPJ_T0030654.1 MGP_LPJ_G0018623.1 mouse_genomes_project 11 77004905 77023000 + MGP_LPJ_P0030654 Myo1c protein_coding protein_coding MGP_LPJ_T0030655.1 MGP_LPJ_G0018623.1 mouse_genomes_project 11 77004919 77006370 + MGP_LPJ_P0030655 Myo1c protein_coding protein_coding MGP_LPJ_T0030656.1 MGP_LPJ_G0018623.1 mouse_genomes_project 11 77010459 77015007 + Myo1c protein_coding retained_intron MGP_LPJ_T0030657.1 MGP_LPJ_G0018623.1 mouse_genomes_project 11 77014489 77018328 + Myo1c protein_coding retained_intron MGP_LPJ_T0030658.1 MGP_LPJ_G0018623.1 mouse_genomes_project 11 77017179 77019340 + Myo1c protein_coding retained_intron MGP_LPJ_T0030659.1 MGP_LPJ_G0018623.1 mouse_genomes_project 11 77019361 77020813 + Myo1c protein_coding retained_intron MGP_LPJ_T0009698.1 MGP_LPJ_G0007816.1 mouse_genomes_project 11 59763092 59763188 - Gm24756 miRNA miRNA MGP_LPJ_T0006213.1 MGP_LPJ_G0005190.1 mouse_genomes_project 11 22111815 22128126 + Gm12066 lincRNA lincRNA MGP_LPJ_T0030477.1 MGP_LPJ_G0018568.1 mouse_genomes_project 11 74636392 74639833 - MGP_LPJ_P0030477 Olfr378 protein_coding protein_coding MGP_LPJ_T0039381.1 MGP_LPJ_G0021251.1 mouse_genomes_project 14 50587603 50601503 - MGP_LPJ_P0039381 Nrl protein_coding protein_coding MGP_LPJ_T0039382.1 MGP_LPJ_G0021251.1 mouse_genomes_project 14 50588153 50602293 - MGP_LPJ_P0039382 Nrl protein_coding protein_coding MGP_LPJ_T0039383.1 MGP_LPJ_G0021251.1 mouse_genomes_project 14 50588153 50602277 - MGP_LPJ_P0039383 Nrl protein_coding protein_coding MGP_LPJ_T0010020.1 MGP_LPJ_G0008138.1 mouse_genomes_project 14 66335391 66335473 + Mir320 miRNA miRNA MGP_LPJ_T0006721.1 MGP_LPJ_G0005556.1 mouse_genomes_project 14 52811312 52812057 + 1700039M10Rik lincRNA lincRNA MGP_LPJ_T0006726.1 MGP_LPJ_G0005561.1 mouse_genomes_project 14 57668370 57670808 - Gm26969 lincRNA lincRNA MGP_LPJ_T0038972.1 MGP_LPJ_G0021119.1 mouse_genomes_project 14 42193696 42340638 + MGP_LPJ_P0038972 Peli2 protein_coding protein_coding MGP_LPJ_T0017363.1 MGP_LPJ_G0015197.1 mouse_genomes_project 14 102903686 102910737 + 4930449E01Rik processed_transcript lincRNA MGP_LPJ_T0017364.1 MGP_LPJ_G0015197.1 mouse_genomes_project 14 102905943 102906303 + 4930449E01Rik processed_transcript TEC MGP_LPJ_T0017365.1 MGP_LPJ_G0015197.1 mouse_genomes_project 14 102908588 102910744 + 4930449E01Rik processed_transcript lincRNA MGP_LPJ_T0039280.1 MGP_LPJ_G0021221.1 mouse_genomes_project 14 49582576 49586466 - MGP_LPJ_P0039280 Psmb5 protein_coding protein_coding MGP_LPJ_T0012978.1 MGP_LPJ_G0011069.1 mouse_genomes_project 14 24270276 24271058 + processed_pseudogene processed_pseudogene MGP_LPJ_T0038291.1 MGP_LPJ_G0020930.1 mouse_genomes_project 14 13229030 13235427 - MGP_LPJ_P0038291 Kcnk16 protein_coding protein_coding MGP_LPJ_T0000953.1 MGP_LPJ_G0000881.1 mouse_genomes_project 14 65048672 65052248 - TEC TEC MGP_LPJ_T0038658.1 MGP_LPJ_G0021021.1 mouse_genomes_project 14 24865735 24943145 - MGP_LPJ_P0038658 Sh3bp5 protein_coding nonsense_mediated_decay MGP_LPJ_T0038659.1 MGP_LPJ_G0021021.1 mouse_genomes_project 14 24879651 24924771 - MGP_LPJ_P0038659 Sh3bp5 protein_coding protein_coding MGP_LPJ_T0038660.1 MGP_LPJ_G0021021.1 mouse_genomes_project 14 24879651 24943132 - MGP_LPJ_P0038660 Sh3bp5 protein_coding protein_coding MGP_LPJ_T0038661.1 MGP_LPJ_G0021021.1 mouse_genomes_project 14 24883462 24914479 - Sh3bp5 protein_coding processed_transcript MGP_LPJ_T0039093.1 MGP_LPJ_G0021182.1 mouse_genomes_project 14 45955915 45964668 + MGP_LPJ_P0039093 protein_coding protein_coding MGP_LPJ_T0011394.1 MGP_LPJ_G0009512.1 mouse_genomes_project 14 57094929 57095185 + Gm27928 misc_RNA misc_RNA MGP_LPJ_T0039489.1 MGP_LPJ_G0021272.1 mouse_genomes_project 14 50836446 50848267 + MGP_LPJ_P0039489 Nop9 protein_coding protein_coding MGP_LPJ_T0040000.1 MGP_LPJ_G0021477.1 mouse_genomes_project 14 71781899 71809774 - MGP_LPJ_P0040000 Slc25a30 protein_coding protein_coding MGP_LPJ_T0038840.1 MGP_LPJ_G0021083.1 mouse_genomes_project 14 32161880 33292298 - MGP_LPJ_P0038840 Nrg3 protein_coding protein_coding MGP_LPJ_T0038841.1 MGP_LPJ_G0021083.1 mouse_genomes_project 14 32163409 33292035 - MGP_LPJ_P0038841 Nrg3 protein_coding protein_coding MGP_LPJ_T0038842.1 MGP_LPJ_G0021083.1 mouse_genomes_project 14 32163425 33292037 - MGP_LPJ_P0038842 Nrg3 protein_coding protein_coding MGP_LPJ_T0038843.1 MGP_LPJ_G0021083.1 mouse_genomes_project 14 32813229 33291876 - Nrg3 protein_coding retained_intron MGP_LPJ_T0038283.1 MGP_LPJ_G0020927.1 mouse_genomes_project 14 12810263 12927463 - MGP_LPJ_P0038283 Gng2 protein_coding protein_coding MGP_LPJ_T0038284.1 MGP_LPJ_G0020927.1 mouse_genomes_project 14 12813371 12927386 - MGP_LPJ_P0038284 Gng2 protein_coding protein_coding MGP_LPJ_T0038285.1 MGP_LPJ_G0020927.1 mouse_genomes_project 14 12813371 12927841 - MGP_LPJ_P0038285 Gng2 protein_coding protein_coding MGP_LPJ_T0038286.1 MGP_LPJ_G0020927.1 mouse_genomes_project 14 12813412 12927273 - MGP_LPJ_P0038286 Gng2 protein_coding protein_coding MGP_LPJ_T0038287.1 MGP_LPJ_G0020927.1 mouse_genomes_project 14 12813455 12927398 - MGP_LPJ_P0038287 Gng2 protein_coding protein_coding MGP_LPJ_T0038288.1 MGP_LPJ_G0020927.1 mouse_genomes_project 14 12813509 12926907 - MGP_LPJ_P0038288 Gng2 protein_coding protein_coding MGP_LPJ_T0038350.1 MGP_LPJ_G0020952.1 mouse_genomes_project 14 14066794 14490601 + MGP_LPJ_P0038350 Adk protein_coding protein_coding MGP_LPJ_T0038351.1 MGP_LPJ_G0020952.1 mouse_genomes_project 14 14092242 14490606 + MGP_LPJ_P0038351 Adk protein_coding unknown_likely_coding MGP_LPJ_T0038366.1 MGP_LPJ_G0020954.1 mouse_genomes_project 14 14723539 14762292 - MGP_LPJ_P0038366 Dupd1 protein_coding protein_coding MGP_LPJ_T0006738.1 MGP_LPJ_G0005568.1 mouse_genomes_project 14 66755862 66776648 + 2410012E07Rik lincRNA lincRNA MGP_LPJ_T0002625.1 MGP_LPJ_G0002518.1 mouse_genomes_project 14 47339127 47339644 + MGP_LPJ_P0002625 Trav7-1 TR_V_gene TR_V_gene MGP_LPJ_T0010022.1 MGP_LPJ_G0008140.1 mouse_genomes_project 14 71240701 71240804 + Gm44482 miRNA miRNA MGP_LPJ_T0040191.1 MGP_LPJ_G0021550.1 mouse_genomes_project 14 116741452 116769870 + MGP_LPJ_P0040191 Gpr180 protein_coding protein_coding MGP_LPJ_T0039019.1 MGP_LPJ_G0021138.1 mouse_genomes_project 14 44474918 44475912 - MGP_LPJ_P0039019 Olfr733 protein_coding protein_coding MGP_LPJ_T0010034.1 MGP_LPJ_G0008152.1 mouse_genomes_project 14 113525888 113525995 + Mir20a miRNA miRNA MGP_LPJ_T0039833.1 MGP_LPJ_G0021418.1 mouse_genomes_project 14 64395349 64414001 - MGP_LPJ_P0039833 Adamdec1 protein_coding protein_coding MGP_LPJ_T0002575.1 MGP_LPJ_G0002474.1 mouse_genomes_project 14 49166019 49166077 + MGP_LPJ_P0002575 Traj12 TR_J_gene TR_J_gene MGP_LPJ_T0039150.1 MGP_LPJ_G0021194.1 mouse_genomes_project 14 46695998 46728770 - MGP_LPJ_P0039150 Hnrnpc protein_coding protein_coding MGP_LPJ_T0039151.1 MGP_LPJ_G0021194.1 mouse_genomes_project 14 46695998 46728770 - MGP_LPJ_P0039151 Hnrnpc protein_coding protein_coding MGP_LPJ_T0039152.1 MGP_LPJ_G0021194.1 mouse_genomes_project 14 46699548 46728754 - MGP_LPJ_P0039152 Hnrnpc protein_coding unknown_likely_coding MGP_LPJ_T0039153.1 MGP_LPJ_G0021194.1 mouse_genomes_project 14 46699548 46728749 - MGP_LPJ_P0039153 Hnrnpc protein_coding unknown_likely_coding MGP_LPJ_T0039404.1 MGP_LPJ_G0021255.1 mouse_genomes_project 14 50655163 50656499 + MGP_LPJ_P0039404 Fitm1 protein_coding protein_coding MGP_LPJ_T0040243.1 MGP_LPJ_G0021574.1 mouse_genomes_project 14 121280057 121291772 - MGP_LPJ_P0040243 Zic5 protein_coding protein_coding MGP_LPJ_T0040244.1 MGP_LPJ_G0021574.1 mouse_genomes_project 14 121283558 121286091 - Zic5 protein_coding processed_transcript MGP_LPJ_T0040098.1 MGP_LPJ_G0021519.1 mouse_genomes_project 14 96176614 96335586 + MGP_LPJ_P0040098 Pibf1 protein_coding protein_coding MGP_LPJ_T0017317.1 MGP_LPJ_G0015180.1 mouse_genomes_project 14 12402356 12403515 + processed_transcript processed_transcript MGP_LPJ_T0040174.1 MGP_LPJ_G0021540.1 mouse_genomes_project 14 103324502 103329346 - MGP_LPJ_P0040174 Spry2 protein_coding protein_coding MGP_LPJ_T0013041.1 MGP_LPJ_G0011132.1 mouse_genomes_project 14 121322216 121322855 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012986.1 MGP_LPJ_G0011077.1 mouse_genomes_project 14 39845904 39846283 - processed_pseudogene processed_pseudogene MGP_LPJ_T0038570.1 MGP_LPJ_G0021005.1 mouse_genomes_project 14 24415419 24429447 - MGP_LPJ_P0038570 Itih1 protein_coding protein_coding MGP_LPJ_T0038571.1 MGP_LPJ_G0021005.1 mouse_genomes_project 14 24415419 24429435 - MGP_LPJ_P0038571 Itih1 protein_coding protein_coding MGP_LPJ_T0038572.1 MGP_LPJ_G0021005.1 mouse_genomes_project 14 24428847 24429444 - Itih1 protein_coding retained_intron MGP_LPJ_T0040117.1 MGP_LPJ_G0021525.1 mouse_genomes_project 14 98869506 98930838 + MGP_LPJ_P0040117 Uchl3 protein_coding protein_coding MGP_LPJ_T0039674.1 MGP_LPJ_G0021357.1 mouse_genomes_project 14 58336523 58461956 + MGP_LPJ_P0039674 Wdfy2 protein_coding protein_coding MGP_LPJ_T0003587.1 MGP_LPJ_G0003257.1 mouse_genomes_project 14 59709394 59713786 - Gm17116 antisense antisense MGP_LPJ_T0002582.1 MGP_LPJ_G0002481.1 mouse_genomes_project 14 49176827 49176893 + MGP_LPJ_P0002582 Traj3 TR_J_gene TR_J_gene MGP_LPJ_T0039798.1 MGP_LPJ_G0021407.1 mouse_genomes_project 14 62660010 62669857 + MGP_LPJ_P0039798 Pnma2 protein_coding protein_coding MGP_LPJ_T0039799.1 MGP_LPJ_G0021407.1 mouse_genomes_project 14 62660048 62668618 + MGP_LPJ_P0039799 Pnma2 protein_coding protein_coding MGP_LPJ_T0039800.1 MGP_LPJ_G0021407.1 mouse_genomes_project 14 62660082 62664524 + Pnma2 protein_coding processed_transcript MGP_LPJ_T0039801.1 MGP_LPJ_G0021407.1 mouse_genomes_project 14 62664113 62665814 + Pnma2 protein_coding processed_transcript MGP_LPJ_T0002624.1 MGP_LPJ_G0002517.1 mouse_genomes_project 14 47323541 47323986 + MGP_LPJ_P0002624 Trav6-1 TR_V_gene TR_V_gene MGP_LPJ_T0099071.1 MGP_LPJ_G0037334.1 mouse_genomes_project 14 56758031 56758135 - Gm25716 snRNA snRNA MGP_LPJ_T0098497.1 MGP_LPJ_G0036774.1 mouse_genomes_project 14 119996838 120002095 + B930095G15Rik sense_intronic sense_intronic MGP_LPJ_T0013001.1 MGP_LPJ_G0011092.1 mouse_genomes_project 14 49277546 49277872 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017368.1 MGP_LPJ_G0015200.1 mouse_genomes_project 14 116843934 116846462 + Gm4675 processed_transcript processed_transcript MGP_LPJ_T0017369.1 MGP_LPJ_G0015200.1 mouse_genomes_project 14 116844582 116870389 + Gm4675 processed_transcript processed_transcript MGP_LPJ_T0017370.1 MGP_LPJ_G0015200.1 mouse_genomes_project 14 116862921 116863464 + Gm4675 processed_transcript processed_transcript MGP_LPJ_T0039526.1 MGP_LPJ_G0021301.1 mouse_genomes_project 14 51832881 51863243 + MGP_LPJ_P0039526 Mphosph8 protein_coding protein_coding MGP_LPJ_T0039527.1 MGP_LPJ_G0021301.1 mouse_genomes_project 14 51838044 51839790 + Mphosph8 protein_coding processed_transcript MGP_LPJ_T0039528.1 MGP_LPJ_G0021301.1 mouse_genomes_project 14 51854193 51857062 + Mphosph8 protein_coding processed_transcript MGP_LPJ_T0039529.1 MGP_LPJ_G0021301.1 mouse_genomes_project 14 51858950 51863240 + Mphosph8 protein_coding processed_transcript MGP_LPJ_T0039530.1 MGP_LPJ_G0021301.1 mouse_genomes_project 14 51859236 51863241 + Mphosph8 protein_coding processed_transcript MGP_LPJ_T0002572.1 MGP_LPJ_G0002471.1 mouse_genomes_project 14 49162597 49162658 + MGP_LPJ_P0002572 Traj16 TR_J_gene TR_J_gene MGP_LPJ_T0098161.1 MGP_LPJ_G0036442.1 mouse_genomes_project 14 22404199 22404303 - Gm23999 rRNA rRNA MGP_LPJ_T0038786.1 MGP_LPJ_G0021062.1 mouse_genomes_project 14 27902154 27904946 + Syt15 protein_coding retained_intron MGP_LPJ_T0038787.1 MGP_LPJ_G0021062.1 mouse_genomes_project 14 27902605 27910396 + MGP_LPJ_P0038787 Syt15 protein_coding protein_coding MGP_LPJ_T0038788.1 MGP_LPJ_G0021062.1 mouse_genomes_project 14 27902606 27913130 + MGP_LPJ_P0038788 Syt15 protein_coding protein_coding MGP_LPJ_T0017358.1 MGP_LPJ_G0015195.1 mouse_genomes_project 14 97372212 97407778 + 4930517O19Rik processed_transcript processed_transcript MGP_LPJ_T0017359.1 MGP_LPJ_G0015195.1 mouse_genomes_project 14 97372259 97408716 + 4930517O19Rik processed_transcript processed_transcript MGP_LPJ_T0017360.1 MGP_LPJ_G0015195.1 mouse_genomes_project 14 97372259 97407263 + 4930517O19Rik processed_transcript processed_transcript MGP_LPJ_T0038775.1 MGP_LPJ_G0021052.1 mouse_genomes_project 14 27588880 27602497 + MGP_LPJ_P0038775 Gdf10 protein_coding protein_coding MGP_LPJ_T0040036.1 MGP_LPJ_G0021491.1 mouse_genomes_project 14 74238494 74246491 - MGP_LPJ_P0040036 Fam216b protein_coding protein_coding MGP_LPJ_T0040037.1 MGP_LPJ_G0021491.1 mouse_genomes_project 14 74239186 74246483 - MGP_LPJ_P0040037 Fam216b protein_coding protein_coding MGP_LPJ_T0040038.1 MGP_LPJ_G0021491.1 mouse_genomes_project 14 74240216 74246465 - MGP_LPJ_P0040038 Fam216b protein_coding nonsense_mediated_decay MGP_LPJ_T0010002.1 MGP_LPJ_G0008120.1 mouse_genomes_project 14 49585129 49585238 - Mir686 miRNA miRNA MGP_LPJ_T0039072.1 MGP_LPJ_G0021166.1 mouse_genomes_project 14 45290518 45291231 - MGP_LPJ_P0039072 Rnase11 protein_coding protein_coding MGP_LPJ_T0038716.1 MGP_LPJ_G0021034.1 mouse_genomes_project 14 25736460 25757714 - MGP_LPJ_P0038716 Timm23 protein_coding protein_coding MGP_LPJ_T0038717.1 MGP_LPJ_G0021034.1 mouse_genomes_project 14 25736860 25757662 - MGP_LPJ_P0038717 Timm23 protein_coding nonsense_mediated_decay MGP_LPJ_T0038718.1 MGP_LPJ_G0021034.1 mouse_genomes_project 14 25747606 25757644 - Timm23 protein_coding retained_intron MGP_LPJ_T0038719.1 MGP_LPJ_G0021034.1 mouse_genomes_project 14 25750010 25757669 - Timm23 protein_coding retained_intron MGP_LPJ_T0038720.1 MGP_LPJ_G0021034.1 mouse_genomes_project 14 25754695 25757695 - Timm23 protein_coding retained_intron MGP_LPJ_T0039006.1 MGP_LPJ_G0021127.1 mouse_genomes_project 14 43845448 43956223 - MGP_LPJ_P0039006 3632451O06Rik protein_coding protein_coding MGP_LPJ_T0039007.1 MGP_LPJ_G0021127.1 mouse_genomes_project 14 43845556 43956211 - MGP_LPJ_P0039007 3632451O06Rik protein_coding protein_coding MGP_LPJ_T0039008.1 MGP_LPJ_G0021127.1 mouse_genomes_project 14 43895752 43919673 - 3632451O06Rik protein_coding processed_transcript MGP_LPJ_T0039545.1 MGP_LPJ_G0021311.1 mouse_genomes_project 14 52495574 52625630 - MGP_LPJ_P0039545 Cryl1 protein_coding protein_coding MGP_LPJ_T0038832.1 MGP_LPJ_G0021077.1 mouse_genomes_project 14 30832553 30843960 - MGP_LPJ_P0038832 Rgr protein_coding protein_coding MGP_LPJ_T0003578.1 MGP_LPJ_G0003250.1 mouse_genomes_project 14 51982466 51986013 + 2410022M11Rik antisense antisense MGP_LPJ_T0010007.1 MGP_LPJ_G0008125.1 mouse_genomes_project 14 53050825 53050889 + Mir3077 miRNA miRNA MGP_LPJ_T0100322.1 MGP_LPJ_G0038585.1 mouse_genomes_project 14 46905388 46905478 + Gm23758 snoRNA snoRNA MGP_LPJ_T0097990.1 MGP_LPJ_G0036271.1 mouse_genomes_project 14 14049979 14059976 - pseudogene pseudogene MGP_LPJ_T0002694.1 MGP_LPJ_G0002576.1 mouse_genomes_project 14 48829547 48830159 + MGP_LPJ_P0002694 Trdv1 TR_V_gene TR_V_gene MGP_LPJ_T0002695.1 MGP_LPJ_G0002576.1 mouse_genomes_project 14 48829547 48830159 + MGP_LPJ_P0002695 Trdv1 TR_V_gene TR_V_gene MGP_LPJ_T0039082.1 MGP_LPJ_G0021174.1 mouse_genomes_project 14 45431046 45431805 + MGP_LPJ_P0039082 Rnase2b protein_coding protein_coding MGP_LPJ_T0002675.1 MGP_LPJ_G0002562.1 mouse_genomes_project 14 48534728 48535322 + MGP_LPJ_P0002675 TR_V_gene TR_V_gene MGP_LPJ_T0013019.1 MGP_LPJ_G0011110.1 mouse_genomes_project 14 70688654 70705436 + processed_pseudogene processed_pseudogene MGP_LPJ_T0038182.1 MGP_LPJ_G0020894.1 mouse_genomes_project 14 670264 705812 - MGP_LPJ_P0038182 Oit1 protein_coding protein_coding MGP_LPJ_T0002645.1 MGP_LPJ_G0002534.1 mouse_genomes_project 14 47740348 47740856 + MGP_LPJ_P0002645 TR_V_gene TR_V_gene MGP_LPJ_T0039092.1 MGP_LPJ_G0021181.1 mouse_genomes_project 14 45930294 45937007 + MGP_LPJ_P0039092 Vmn2r125 protein_coding protein_coding MGP_LPJ_T0017376.1 MGP_LPJ_G0015204.1 mouse_genomes_project 14 121737162 121751633 + 4930594M22Rik processed_transcript processed_transcript MGP_LPJ_T0017377.1 MGP_LPJ_G0015204.1 mouse_genomes_project 14 121737199 121753385 + 4930594M22Rik processed_transcript processed_transcript MGP_LPJ_T0017378.1 MGP_LPJ_G0015204.1 mouse_genomes_project 14 121737207 121761412 + 4930594M22Rik processed_transcript processed_transcript MGP_LPJ_T0039851.1 MGP_LPJ_G0021430.1 mouse_genomes_project 14 65700870 65932989 + MGP_LPJ_P0039851 Pebp4 protein_coding protein_coding MGP_LPJ_T0039281.1 MGP_LPJ_G0021222.1 mouse_genomes_project 14 49593743 49597905 + MGP_LPJ_P0039281 Psmb11 protein_coding protein_coding MGP_LPJ_T0000958.1 MGP_LPJ_G0000886.1 mouse_genomes_project 14 96877101 96927229 - TEC TEC MGP_LPJ_T0038512.1 MGP_LPJ_G0020992.1 mouse_genomes_project 14 23402579 23417464 + MGP_LPJ_P0038512 Actr8 protein_coding protein_coding MGP_LPJ_T0040048.1 MGP_LPJ_G0021498.1 mouse_genomes_project 14 75549538 75560396 - Naa16 protein_coding retained_intron MGP_LPJ_T0040049.1 MGP_LPJ_G0021498.1 mouse_genomes_project 14 75549841 75609306 - MGP_LPJ_P0040049 Naa16 protein_coding protein_coding MGP_LPJ_T0040050.1 MGP_LPJ_G0021498.1 mouse_genomes_project 14 75558175 75605586 - MGP_LPJ_P0040050 Naa16 protein_coding nonsense_mediated_decay MGP_LPJ_T0040051.1 MGP_LPJ_G0021498.1 mouse_genomes_project 14 75567998 75609143 - MGP_LPJ_P0040051 Naa16 protein_coding unknown_likely_coding MGP_LPJ_T0040052.1 MGP_LPJ_G0021498.1 mouse_genomes_project 14 75586614 75609220 - MGP_LPJ_P0040052 Naa16 protein_coding nonsense_mediated_decay MGP_LPJ_T0040053.1 MGP_LPJ_G0021498.1 mouse_genomes_project 14 75603084 75609218 - Naa16 protein_coding retained_intron MGP_LPJ_T0013008.1 MGP_LPJ_G0011099.1 mouse_genomes_project 14 51962288 51975273 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013034.1 MGP_LPJ_G0011125.1 mouse_genomes_project 14 102696292 102696846 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099070.1 MGP_LPJ_G0037333.1 mouse_genomes_project 14 53085001 53085148 - Gm22738 snRNA snRNA MGP_LPJ_T0038480.1 MGP_LPJ_G0020977.1 mouse_genomes_project 14 19908868 19918845 - MGP_LPJ_P0038480 Pde12 protein_coding protein_coding MGP_LPJ_T0038510.1 MGP_LPJ_G0020991.1 mouse_genomes_project 14 23387044 23393811 + MGP_LPJ_P0038510 Selk protein_coding protein_coding MGP_LPJ_T0038511.1 MGP_LPJ_G0020991.1 mouse_genomes_project 14 23387172 23392334 + Selk protein_coding processed_transcript MGP_LPJ_T0039370.1 MGP_LPJ_G0021247.1 mouse_genomes_project 14 50283161 50298979 + MGP_LPJ_P0039370 Dhrs2 protein_coding protein_coding MGP_LPJ_T0039371.1 MGP_LPJ_G0021247.1 mouse_genomes_project 14 50292285 50298792 + MGP_LPJ_P0039371 Dhrs2 protein_coding protein_coding MGP_LPJ_T0040236.1 MGP_LPJ_G0021569.1 mouse_genomes_project 14 120747034 120759897 - MGP_LPJ_P0040236 Gpr183 protein_coding protein_coding MGP_LPJ_T0038239.1 MGP_LPJ_G0020915.1 mouse_genomes_project 14 8934243 9002817 + MGP_LPJ_P0038239 Ngly1 protein_coding protein_coding MGP_LPJ_T0038240.1 MGP_LPJ_G0020915.1 mouse_genomes_project 14 8934290 8973322 + Ngly1 protein_coding retained_intron MGP_LPJ_T0038241.1 MGP_LPJ_G0020915.1 mouse_genomes_project 14 8970998 8973445 + Ngly1 protein_coding retained_intron MGP_LPJ_T0100351.1 MGP_LPJ_G0038614.1 mouse_genomes_project 14 97582117 97582249 + Gm26367 snoRNA snoRNA MGP_LPJ_T0002658.1 MGP_LPJ_G0002547.1 mouse_genomes_project 14 48248735 48249265 + MGP_LPJ_P0002658 TR_V_gene TR_V_gene MGP_LPJ_T0012987.1 MGP_LPJ_G0011078.1 mouse_genomes_project 14 39959778 39961135 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098165.1 MGP_LPJ_G0036446.1 mouse_genomes_project 14 69836840 69836946 - Gm22164 rRNA rRNA MGP_LPJ_T0100356.1 MGP_LPJ_G0038619.1 mouse_genomes_project 14 102365604 102365738 + Gm24280 snoRNA snoRNA MGP_LPJ_T0040032.1 MGP_LPJ_G0021488.1 mouse_genomes_project 14 73931721 73935743 - MGP_LPJ_P0040032 Gm1587 protein_coding protein_coding MGP_LPJ_T0038210.1 MGP_LPJ_G0020902.1 mouse_genomes_project 14 6162454 6179416 + MGP_LPJ_P0038210 Sntn protein_coding protein_coding MGP_LPJ_T0040168.1 MGP_LPJ_G0021539.1 mouse_genomes_project 14 102663344 102715165 + MGP_LPJ_P0040168 Ndfip2 protein_coding protein_coding MGP_LPJ_T0040169.1 MGP_LPJ_G0021539.1 mouse_genomes_project 14 102663489 102715171 + MGP_LPJ_P0040169 Ndfip2 protein_coding protein_coding MGP_LPJ_T0040170.1 MGP_LPJ_G0021539.1 mouse_genomes_project 14 102663589 102698797 + Ndfip2 protein_coding retained_intron MGP_LPJ_T0040171.1 MGP_LPJ_G0021539.1 mouse_genomes_project 14 102696149 102714739 + Ndfip2 protein_coding retained_intron MGP_LPJ_T0040172.1 MGP_LPJ_G0021539.1 mouse_genomes_project 14 102696542 102714673 + Ndfip2 protein_coding retained_intron MGP_LPJ_T0040173.1 MGP_LPJ_G0021539.1 mouse_genomes_project 14 102698397 102714739 + Ndfip2 protein_coding processed_transcript MGP_LPJ_T0039236.1 MGP_LPJ_G0021209.1 mouse_genomes_project 14 49215813 49232033 + MGP_LPJ_P0039236 Abhd4 protein_coding protein_coding MGP_LPJ_T0039237.1 MGP_LPJ_G0021209.1 mouse_genomes_project 14 49220882 49232127 + MGP_LPJ_P0039237 Abhd4 protein_coding protein_coding MGP_LPJ_T0039238.1 MGP_LPJ_G0021209.1 mouse_genomes_project 14 49220897 49224785 + Abhd4 protein_coding retained_intron MGP_LPJ_T0039239.1 MGP_LPJ_G0021209.1 mouse_genomes_project 14 49220903 49224944 + MGP_LPJ_P0039239 Abhd4 protein_coding nonsense_mediated_decay MGP_LPJ_T0039240.1 MGP_LPJ_G0021209.1 mouse_genomes_project 14 49220931 49224947 + MGP_LPJ_P0039240 Abhd4 protein_coding protein_coding MGP_LPJ_T0039241.1 MGP_LPJ_G0021209.1 mouse_genomes_project 14 49224599 49233370 + MGP_LPJ_P0039241 Abhd4 protein_coding protein_coding MGP_LPJ_T0039242.1 MGP_LPJ_G0021209.1 mouse_genomes_project 14 49224904 49230812 + MGP_LPJ_P0039242 Abhd4 protein_coding nonsense_mediated_decay MGP_LPJ_T0039677.1 MGP_LPJ_G0021360.1 mouse_genomes_project 14 58520526 58528997 + MGP_LPJ_P0039677 Defb43 protein_coding protein_coding MGP_LPJ_T0100306.1 MGP_LPJ_G0038569.1 mouse_genomes_project 14 4709355 4709484 - Gm24578 snoRNA snoRNA MGP_LPJ_T0002655.1 MGP_LPJ_G0002544.1 mouse_genomes_project 14 48130422 48131016 + MGP_LPJ_P0002655 TR_V_gene TR_V_gene MGP_LPJ_T0039688.1 MGP_LPJ_G0021364.1 mouse_genomes_project 14 58663851 58700667 - MGP_LPJ_P0039688 Fdft1 protein_coding protein_coding MGP_LPJ_T0038687.1 MGP_LPJ_G0021028.1 mouse_genomes_project 14 25575999 25610787 + MGP_LPJ_P0038687 Galnt15 protein_coding protein_coding MGP_LPJ_T0038688.1 MGP_LPJ_G0021028.1 mouse_genomes_project 14 25576421 25608817 + MGP_LPJ_P0038688 Galnt15 protein_coding protein_coding MGP_LPJ_T0039958.1 MGP_LPJ_G0021461.1 mouse_genomes_project 14 69429976 69438478 + MGP_LPJ_P0039958 Med4 protein_coding protein_coding MGP_LPJ_T0039474.1 MGP_LPJ_G0021265.1 mouse_genomes_project 14 50746311 50748930 - MGP_LPJ_P0039474 Mdp1 protein_coding protein_coding MGP_LPJ_T0010032.1 MGP_LPJ_G0008150.1 mouse_genomes_project 14 113525582 113525678 + Mir18 miRNA miRNA MGP_LPJ_T0040242.1 MGP_LPJ_G0021573.1 mouse_genomes_project 14 121254078 121271122 - MGP_LPJ_P0040242 Gm5089 protein_coding protein_coding MGP_LPJ_T0039244.1 MGP_LPJ_G0021211.1 mouse_genomes_project 14 49313526 49317342 + Oxa1l protein_coding retained_intron MGP_LPJ_T0039245.1 MGP_LPJ_G0021211.1 mouse_genomes_project 14 49313526 49322514 + MGP_LPJ_P0039245 Oxa1l protein_coding protein_coding MGP_LPJ_T0039246.1 MGP_LPJ_G0021211.1 mouse_genomes_project 14 49313730 49319876 + Oxa1l protein_coding retained_intron MGP_LPJ_T0039975.1 MGP_LPJ_G0021467.1 mouse_genomes_project 14 70711589 70902786 - MGP_LPJ_P0039975 Lrch1 protein_coding protein_coding MGP_LPJ_T0039976.1 MGP_LPJ_G0021467.1 mouse_genomes_project 14 70721973 70902569 - MGP_LPJ_P0039976 Lrch1 protein_coding unknown_likely_coding MGP_LPJ_T0039656.1 MGP_LPJ_G0021349.1 mouse_genomes_project 14 57019281 57028468 + MGP_LPJ_P0039656 Trim13 protein_coding protein_coding MGP_LPJ_T0039657.1 MGP_LPJ_G0021349.1 mouse_genomes_project 14 57020568 57028468 + MGP_LPJ_P0039657 Trim13 protein_coding protein_coding MGP_LPJ_T0003531.1 MGP_LPJ_G0003216.1 mouse_genomes_project 14 3033427 3070535 + Fhitos antisense antisense MGP_LPJ_T0039919.1 MGP_LPJ_G0021455.1 mouse_genomes_project 14 68489858 68643884 - MGP_LPJ_P0039919 Fndc3a protein_coding protein_coding MGP_LPJ_T0039920.1 MGP_LPJ_G0021455.1 mouse_genomes_project 14 68491461 68554362 - MGP_LPJ_P0039920 Fndc3a protein_coding protein_coding MGP_LPJ_T0039921.1 MGP_LPJ_G0021455.1 mouse_genomes_project 14 68513873 68517129 - Fndc3a protein_coding retained_intron MGP_LPJ_T0039922.1 MGP_LPJ_G0021455.1 mouse_genomes_project 14 68517152 68660591 - MGP_LPJ_P0039922 Fndc3a protein_coding protein_coding MGP_LPJ_T0039923.1 MGP_LPJ_G0021455.1 mouse_genomes_project 14 68527302 68605710 - MGP_LPJ_P0039923 Fndc3a protein_coding nonsense_mediated_decay MGP_LPJ_T0039924.1 MGP_LPJ_G0021455.1 mouse_genomes_project 14 68549772 68661046 - Fndc3a protein_coding retained_intron MGP_LPJ_T0039925.1 MGP_LPJ_G0021455.1 mouse_genomes_project 14 68602881 68660892 - Fndc3a protein_coding retained_intron MGP_LPJ_T0039605.1 MGP_LPJ_G0021329.1 mouse_genomes_project 14 54680096 54727861 - MGP_LPJ_P0039605 Gm6904 protein_coding protein_coding MGP_LPJ_T0100346.1 MGP_LPJ_G0038609.1 mouse_genomes_project 14 91789176 91789302 + Gm24680 snoRNA snoRNA MGP_LPJ_T0039678.1 MGP_LPJ_G0021361.1 mouse_genomes_project 14 58545012 58548797 - MGP_LPJ_P0039678 Defb30 protein_coding protein_coding MGP_LPJ_T0039679.1 MGP_LPJ_G0021361.1 mouse_genomes_project 14 58545416 58560862 - MGP_LPJ_P0039679 Defb30 protein_coding protein_coding MGP_LPJ_T0039680.1 MGP_LPJ_G0021361.1 mouse_genomes_project 14 58546740 58560867 - MGP_LPJ_P0039680 Defb30 protein_coding protein_coding MGP_LPJ_T0039681.1 MGP_LPJ_G0021361.1 mouse_genomes_project 14 58546826 58548810 - MGP_LPJ_P0039681 Defb30 protein_coding protein_coding MGP_LPJ_T0002527.1 MGP_LPJ_G0002430.1 mouse_genomes_project 14 49082422 49082473 + MGP_LPJ_P0002527 Trdj1 TR_J_gene TR_J_gene MGP_LPJ_T0099049.1 MGP_LPJ_G0037312.1 mouse_genomes_project 14 14492505 14492597 + Gm25864 snRNA snRNA MGP_LPJ_T0038325.1 MGP_LPJ_G0020941.1 mouse_genomes_project 14 13641768 13649187 - MGP_LPJ_P0038325 Myoz1 protein_coding protein_coding MGP_LPJ_T0038798.1 MGP_LPJ_G0021068.1 mouse_genomes_project 14 28094650 28190736 - MGP_LPJ_P0038798 Bmpr1a protein_coding protein_coding MGP_LPJ_T0038799.1 MGP_LPJ_G0021068.1 mouse_genomes_project 14 28098403 28145834 - MGP_LPJ_P0038799 Bmpr1a protein_coding protein_coding MGP_LPJ_T0038800.1 MGP_LPJ_G0021068.1 mouse_genomes_project 14 28118642 28191390 - MGP_LPJ_P0038800 Bmpr1a protein_coding protein_coding MGP_LPJ_T0038801.1 MGP_LPJ_G0021068.1 mouse_genomes_project 14 28127528 28190556 - MGP_LPJ_P0038801 Bmpr1a protein_coding protein_coding MGP_LPJ_T0040044.1 MGP_LPJ_G0021496.1 mouse_genomes_project 14 75418618 75455030 - MGP_LPJ_P0040044 Zfp957 protein_coding protein_coding MGP_LPJ_T0040045.1 MGP_LPJ_G0021496.1 mouse_genomes_project 14 75418620 75431632 - MGP_LPJ_P0040045 Zfp957 protein_coding protein_coding MGP_LPJ_T0040046.1 MGP_LPJ_G0021496.1 mouse_genomes_project 14 75430685 75455103 - Zfp957 protein_coding retained_intron MGP_LPJ_T0039612.1 MGP_LPJ_G0021332.1 mouse_genomes_project 14 54903063 54938996 - MGP_LPJ_P0039612 Cdadc1 protein_coding protein_coding MGP_LPJ_T0039613.1 MGP_LPJ_G0021332.1 mouse_genomes_project 14 54903063 54938996 - MGP_LPJ_P0039613 Cdadc1 protein_coding protein_coding MGP_LPJ_T0039614.1 MGP_LPJ_G0021332.1 mouse_genomes_project 14 54906661 54938996 - MGP_LPJ_P0039614 Cdadc1 protein_coding protein_coding MGP_LPJ_T0039615.1 MGP_LPJ_G0021332.1 mouse_genomes_project 14 54909899 54938996 - MGP_LPJ_P0039615 Cdadc1 protein_coding protein_coding MGP_LPJ_T0002743.1 MGP_LPJ_G0002615.1 mouse_genomes_project 14 48308393 48308946 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0002571.1 MGP_LPJ_G0002470.1 mouse_genomes_project 14 49161230 49161293 + MGP_LPJ_P0002571 Traj17 TR_J_gene TR_J_gene MGP_LPJ_T0038167.1 MGP_LPJ_G0020890.1 mouse_genomes_project 14 481341 488333 - MGP_LPJ_P0038167 Pdhb protein_coding protein_coding MGP_LPJ_T0013036.1 MGP_LPJ_G0011127.1 mouse_genomes_project 14 110817861 110818344 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100328.1 MGP_LPJ_G0038591.1 mouse_genomes_project 14 58009474 58009604 + Gm24625 snoRNA snoRNA MGP_LPJ_T0039739.1 MGP_LPJ_G0021385.1 mouse_genomes_project 14 60903260 60957329 + MGP_LPJ_P0039739 Fbxo16 protein_coding protein_coding MGP_LPJ_T0039740.1 MGP_LPJ_G0021385.1 mouse_genomes_project 14 60907296 60957253 + MGP_LPJ_P0039740 Fbxo16 protein_coding unknown_likely_coding MGP_LPJ_T0039338.1 MGP_LPJ_G0021239.1 mouse_genomes_project 14 49944121 50016178 - MGP_LPJ_P0039338 protein_coding protein_coding MGP_LPJ_T0039339.1 MGP_LPJ_G0021239.1 mouse_genomes_project 14 50013536 50016112 - MGP_LPJ_P0039339 protein_coding protein_coding MGP_LPJ_T0039340.1 MGP_LPJ_G0021239.1 mouse_genomes_project 14 50013536 50016142 - MGP_LPJ_P0039340 protein_coding protein_coding MGP_LPJ_T0039341.1 MGP_LPJ_G0021239.1 mouse_genomes_project 14 50014847 50016464 - MGP_LPJ_P0039341 protein_coding protein_coding MGP_LPJ_T0039482.1 MGP_LPJ_G0021270.1 mouse_genomes_project 14 50806663 50812989 - MGP_LPJ_P0039482 Rabggta protein_coding protein_coding MGP_LPJ_T0039483.1 MGP_LPJ_G0021270.1 mouse_genomes_project 14 50806667 50812967 - MGP_LPJ_P0039483 Rabggta protein_coding protein_coding MGP_LPJ_T0039484.1 MGP_LPJ_G0021270.1 mouse_genomes_project 14 50807115 50813048 - MGP_LPJ_P0039484 Rabggta protein_coding protein_coding MGP_LPJ_T0100348.1 MGP_LPJ_G0038611.1 mouse_genomes_project 14 93912349 93912441 + Gm24770 snoRNA snoRNA MGP_LPJ_T0040179.1 MGP_LPJ_G0021544.1 mouse_genomes_project 14 108617542 108624068 - MGP_LPJ_P0040179 Slitrk6 protein_coding protein_coding MGP_LPJ_T0038192.1 MGP_LPJ_G0020897.1 mouse_genomes_project 14 3873669 4609225 + MGP_LPJ_P0038192 Ptprg protein_coding protein_coding MGP_LPJ_T0038193.1 MGP_LPJ_G0020897.1 mouse_genomes_project 14 3873690 4605967 + MGP_LPJ_P0038193 Ptprg protein_coding nonsense_mediated_decay MGP_LPJ_T0038194.1 MGP_LPJ_G0020897.1 mouse_genomes_project 14 3873718 4309669 + Ptprg protein_coding retained_intron MGP_LPJ_T0038195.1 MGP_LPJ_G0020897.1 mouse_genomes_project 14 4443286 4477395 + MGP_LPJ_P0038195 Ptprg protein_coding protein_coding MGP_LPJ_T0038196.1 MGP_LPJ_G0020897.1 mouse_genomes_project 14 4554612 4605966 + MGP_LPJ_P0038196 Ptprg protein_coding protein_coding MGP_LPJ_T0038197.1 MGP_LPJ_G0020897.1 mouse_genomes_project 14 4583578 4588138 + Ptprg protein_coding processed_transcript MGP_LPJ_T0039073.1 MGP_LPJ_G0021167.1 mouse_genomes_project 14 45297775 45298320 - MGP_LPJ_P0039073 Rnase12 protein_coding protein_coding MGP_LPJ_T0039682.1 MGP_LPJ_G0021362.1 mouse_genomes_project 14 58557897 58559517 + MGP_LPJ_P0039682 Defb42 protein_coding protein_coding MGP_LPJ_T0039683.1 MGP_LPJ_G0021362.1 mouse_genomes_project 14 58557935 58571560 + Defb42 protein_coding processed_transcript MGP_LPJ_T0039684.1 MGP_LPJ_G0021362.1 mouse_genomes_project 14 58558000 58559465 + MGP_LPJ_P0039684 Defb42 protein_coding protein_coding MGP_LPJ_T0039685.1 MGP_LPJ_G0021362.1 mouse_genomes_project 14 58559135 58559482 + MGP_LPJ_P0039685 Defb42 protein_coding protein_coding MGP_LPJ_T0039686.1 MGP_LPJ_G0021362.1 mouse_genomes_project 14 58568489 58570351 + Defb42 protein_coding processed_transcript MGP_LPJ_T0002566.1 MGP_LPJ_G0002465.1 mouse_genomes_project 14 49155189 49155249 + MGP_LPJ_P0002566 Traj22 TR_J_gene TR_J_gene MGP_LPJ_T0038887.1 MGP_LPJ_G0021103.1 mouse_genomes_project 14 39506704 39571689 - MGP_LPJ_P0038887 Ddhd1 protein_coding protein_coding MGP_LPJ_T0038888.1 MGP_LPJ_G0021103.1 mouse_genomes_project 14 39507015 39534806 - Ddhd1 protein_coding retained_intron MGP_LPJ_T0038889.1 MGP_LPJ_G0021103.1 mouse_genomes_project 14 39508181 39571644 - MGP_LPJ_P0038889 Ddhd1 protein_coding protein_coding MGP_LPJ_T0038890.1 MGP_LPJ_G0021103.1 mouse_genomes_project 14 39508181 39571644 - MGP_LPJ_P0038890 Ddhd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038891.1 MGP_LPJ_G0021103.1 mouse_genomes_project 14 39508252 39536721 - Ddhd1 protein_coding retained_intron MGP_LPJ_T0038892.1 MGP_LPJ_G0021103.1 mouse_genomes_project 14 39508465 39516258 - MGP_LPJ_P0038892 Ddhd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038893.1 MGP_LPJ_G0021103.1 mouse_genomes_project 14 39508857 39534317 - MGP_LPJ_P0038893 Ddhd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038894.1 MGP_LPJ_G0021103.1 mouse_genomes_project 14 39508947 39571688 - MGP_LPJ_P0038894 Ddhd1 protein_coding protein_coding MGP_LPJ_T0038895.1 MGP_LPJ_G0021103.1 mouse_genomes_project 14 39518534 39522873 - Ddhd1 protein_coding retained_intron MGP_LPJ_T0038896.1 MGP_LPJ_G0021103.1 mouse_genomes_project 14 39534242 39570947 - Ddhd1 protein_coding processed_transcript MGP_LPJ_T0038897.1 MGP_LPJ_G0021103.1 mouse_genomes_project 14 39541937 39570964 - Ddhd1 protein_coding retained_intron MGP_LPJ_T0038235.1 MGP_LPJ_G0020914.1 mouse_genomes_project 14 8923652 8934772 - MGP_LPJ_P0038235 Oxsm protein_coding protein_coding MGP_LPJ_T0038236.1 MGP_LPJ_G0020914.1 mouse_genomes_project 14 8924913 8928309 - MGP_LPJ_P0038236 Oxsm protein_coding protein_coding MGP_LPJ_T0038237.1 MGP_LPJ_G0020914.1 mouse_genomes_project 14 8925615 8934140 - MGP_LPJ_P0038237 Oxsm protein_coding protein_coding MGP_LPJ_T0038238.1 MGP_LPJ_G0020914.1 mouse_genomes_project 14 8927150 8934138 - MGP_LPJ_P0038238 Oxsm protein_coding protein_coding MGP_LPJ_T0038797.1 MGP_LPJ_G0021067.1 mouse_genomes_project 14 28060235 28088401 + MGP_LPJ_P0038797 Mmrn2 protein_coding protein_coding MGP_LPJ_T0002528.1 MGP_LPJ_G0002431.1 mouse_genomes_project 14 49089268 49089327 + MGP_LPJ_P0002528 Trdj2 TR_J_gene TR_J_gene MGP_LPJ_T0039038.1 MGP_LPJ_G0021153.1 mouse_genomes_project 14 44959970 44968081 - MGP_LPJ_P0039038 Olfr749 protein_coding protein_coding MGP_LPJ_T0013022.1 MGP_LPJ_G0011113.1 mouse_genomes_project 14 70688656 70705438 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017374.1 MGP_LPJ_G0015203.1 mouse_genomes_project 14 121297833 121301073 - 2610035F20Rik processed_transcript retained_intron MGP_LPJ_T0017375.1 MGP_LPJ_G0015203.1 mouse_genomes_project 14 121297926 121302673 - 2610035F20Rik processed_transcript processed_transcript MGP_LPJ_T0100327.1 MGP_LPJ_G0038590.1 mouse_genomes_project 14 53937472 53937605 - Gm25614 snoRNA snoRNA MGP_LPJ_T0010018.1 MGP_LPJ_G0008136.1 mouse_genomes_project 14 63663024 63663134 - Mir6539 miRNA miRNA MGP_LPJ_T0038339.1 MGP_LPJ_G0020949.1 mouse_genomes_project 14 13838629 13845357 + MGP_LPJ_P0038339 Plau protein_coding protein_coding MGP_LPJ_T0040065.1 MGP_LPJ_G0021505.1 mouse_genomes_project 14 76008998 76013536 - MGP_LPJ_P0040065 Pcdh8 protein_coding protein_coding MGP_LPJ_T0040066.1 MGP_LPJ_G0021505.1 mouse_genomes_project 14 76009003 76013536 - MGP_LPJ_P0040066 Pcdh8 protein_coding protein_coding MGP_LPJ_T0040067.1 MGP_LPJ_G0021505.1 mouse_genomes_project 14 76009007 76013536 - Pcdh8 protein_coding retained_intron MGP_LPJ_T0040068.1 MGP_LPJ_G0021505.1 mouse_genomes_project 14 76011255 76013428 - Pcdh8 protein_coding processed_transcript MGP_LPJ_T0011383.1 MGP_LPJ_G0009501.1 mouse_genomes_project 14 25052522 25052824 - Gm24057 misc_RNA misc_RNA MGP_LPJ_T0101267.1 MGP_LPJ_G0039504.1 mouse_genomes_project 14 42276934 42306593 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101268.1 MGP_LPJ_G0039504.1 mouse_genomes_project 14 42305377 42306386 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0038331.1 MGP_LPJ_G0020944.1 mouse_genomes_project 14 13688578 13694749 + MGP_LPJ_P0038331 Fut11 protein_coding protein_coding MGP_LPJ_T0039626.1 MGP_LPJ_G0021337.1 mouse_genomes_project 14 55645133 55691461 + MGP_LPJ_P0039626 Mtmr6 protein_coding protein_coding MGP_LPJ_T0039627.1 MGP_LPJ_G0021337.1 mouse_genomes_project 14 55645266 55691471 + MGP_LPJ_P0039627 Mtmr6 protein_coding unknown_likely_coding MGP_LPJ_T0013030.1 MGP_LPJ_G0011121.1 mouse_genomes_project 14 96377002 96377435 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098168.1 MGP_LPJ_G0036449.1 mouse_genomes_project 14 74468015 74468130 - Gm26197 rRNA rRNA MGP_LPJ_T0002673.1 MGP_LPJ_G0002560.1 mouse_genomes_project 14 48476319 48476824 + MGP_LPJ_P0002673 TR_V_gene TR_V_gene MGP_LPJ_T0002686.1 MGP_LPJ_G0002570.1 mouse_genomes_project 14 48709701 48710318 + MGP_LPJ_P0002686 Trav3-4 TR_V_gene TR_V_gene MGP_LPJ_T0039220.1 MGP_LPJ_G0021205.1 mouse_genomes_project 14 47097976 47106131 + MGP_LPJ_P0039220 Olfr1509 protein_coding protein_coding MGP_LPJ_T0039221.1 MGP_LPJ_G0021205.1 mouse_genomes_project 14 47097977 47105520 + MGP_LPJ_P0039221 Olfr1509 protein_coding protein_coding MGP_LPJ_T0039222.1 MGP_LPJ_G0021205.1 mouse_genomes_project 14 47098012 47105354 + MGP_LPJ_P0039222 Olfr1509 protein_coding protein_coding MGP_LPJ_T0039223.1 MGP_LPJ_G0021205.1 mouse_genomes_project 14 47104076 47105613 + MGP_LPJ_P0039223 Olfr1509 protein_coding protein_coding MGP_LPJ_T0039224.1 MGP_LPJ_G0021205.1 mouse_genomes_project 14 47105121 47106131 + MGP_LPJ_P0039224 Olfr1509 protein_coding protein_coding MGP_LPJ_T0039282.1 MGP_LPJ_G0021223.1 mouse_genomes_project 14 49599573 49610829 - MGP_LPJ_P0039282 Cdh24 protein_coding unknown_likely_coding MGP_LPJ_T0012974.1 MGP_LPJ_G0011065.1 mouse_genomes_project 14 19810088 19810886 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013028.1 MGP_LPJ_G0011119.1 mouse_genomes_project 14 95779545 95780485 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101271.1 MGP_LPJ_G0039506.1 mouse_genomes_project 14 54177113 54177596 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101272.1 MGP_LPJ_G0039506.1 mouse_genomes_project 14 54177517 54178509 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0017341.1 MGP_LPJ_G0015187.1 mouse_genomes_project 14 62014379 62016207 - 1700001G11Rik processed_transcript processed_transcript MGP_LPJ_T0017342.1 MGP_LPJ_G0015187.1 mouse_genomes_project 14 62014380 62016018 - 1700001G11Rik processed_transcript processed_transcript MGP_LPJ_T0017343.1 MGP_LPJ_G0015187.1 mouse_genomes_project 14 62014540 62015961 - 1700001G11Rik processed_transcript processed_transcript MGP_LPJ_T0002676.1 MGP_LPJ_G0002563.1 mouse_genomes_project 14 48550138 48550724 + MGP_LPJ_P0002676 TR_V_gene TR_V_gene MGP_LPJ_T0002678.1 MGP_LPJ_G0002563.1 mouse_genomes_project 14 48550444 48550720 + MGP_LPJ_P0002678 TR_V_gene TR_V_gene MGP_LPJ_T0039553.1 MGP_LPJ_G0021315.1 mouse_genomes_project 14 52821122 52910013 - MGP_LPJ_P0039553 Xpo4 protein_coding protein_coding MGP_LPJ_T0039554.1 MGP_LPJ_G0021315.1 mouse_genomes_project 14 52822391 52909539 - MGP_LPJ_P0039554 Xpo4 protein_coding protein_coding MGP_LPJ_T0039555.1 MGP_LPJ_G0021315.1 mouse_genomes_project 14 52836705 52909575 - MGP_LPJ_P0039555 Xpo4 protein_coding nonsense_mediated_decay MGP_LPJ_T0039556.1 MGP_LPJ_G0021315.1 mouse_genomes_project 14 52869240 52909539 - MGP_LPJ_P0039556 Xpo4 protein_coding nonsense_mediated_decay MGP_LPJ_T0039557.1 MGP_LPJ_G0021315.1 mouse_genomes_project 14 52881553 52909547 - Xpo4 protein_coding processed_transcript MGP_LPJ_T0039558.1 MGP_LPJ_G0021315.1 mouse_genomes_project 14 52881559 52909818 - Xpo4 protein_coding retained_intron MGP_LPJ_T0039559.1 MGP_LPJ_G0021315.1 mouse_genomes_project 14 52881574 52909550 - Xpo4 protein_coding retained_intron MGP_LPJ_T0039560.1 MGP_LPJ_G0021315.1 mouse_genomes_project 14 52881803 52910013 - MGP_LPJ_P0039560 Xpo4 protein_coding nonsense_mediated_decay MGP_LPJ_T0039562.1 MGP_LPJ_G0021315.1 mouse_genomes_project 14 52882290 52888432 - Xpo4 protein_coding retained_intron MGP_LPJ_T0039563.1 MGP_LPJ_G0021315.1 mouse_genomes_project 14 52887736 52909572 - Xpo4 protein_coding retained_intron MGP_LPJ_T0039838.1 MGP_LPJ_G0021422.1 mouse_genomes_project 14 65029719 65033761 + MGP_LPJ_P0039838 Nkx3-1 protein_coding protein_coding MGP_LPJ_T0100342.1 MGP_LPJ_G0038605.1 mouse_genomes_project 14 87011799 87011930 + Gm25495 snoRNA snoRNA MGP_LPJ_T0038299.1 MGP_LPJ_G0020935.1 mouse_genomes_project 14 13362065 13364390 - MGP_LPJ_P0038299 Mrps16 protein_coding protein_coding MGP_LPJ_T0012999.1 MGP_LPJ_G0011090.1 mouse_genomes_project 14 48547591 48548032 - processed_pseudogene processed_pseudogene MGP_LPJ_T0038335.1 MGP_LPJ_G0020948.1 mouse_genomes_project 14 13729332 13790950 - MGP_LPJ_P0038335 Camk2g protein_coding unknown_likely_coding MGP_LPJ_T0038336.1 MGP_LPJ_G0020948.1 mouse_genomes_project 14 13729337 13791073 - MGP_LPJ_P0038336 Camk2g protein_coding protein_coding MGP_LPJ_T0038337.1 MGP_LPJ_G0020948.1 mouse_genomes_project 14 13729337 13791073 - MGP_LPJ_P0038337 Camk2g protein_coding protein_coding MGP_LPJ_T0038338.1 MGP_LPJ_G0020948.1 mouse_genomes_project 14 13729337 13791073 - MGP_LPJ_P0038338 Camk2g protein_coding protein_coding MGP_LPJ_T0038221.1 MGP_LPJ_G0020908.1 mouse_genomes_project 14 6884304 6890444 + MGP_LPJ_P0038221 Olfr31 protein_coding protein_coding MGP_LPJ_T0038222.1 MGP_LPJ_G0020908.1 mouse_genomes_project 14 6889490 6890444 + MGP_LPJ_P0038222 Olfr31 protein_coding protein_coding MGP_LPJ_T0040176.1 MGP_LPJ_G0021542.1 mouse_genomes_project 14 103522956 103526072 + MGP_LPJ_P0040176 Trim52 protein_coding protein_coding MGP_LPJ_T0040177.1 MGP_LPJ_G0021542.1 mouse_genomes_project 14 103522957 103542969 + Trim52 protein_coding processed_transcript MGP_LPJ_T0038735.1 MGP_LPJ_G0021039.1 mouse_genomes_project 14 26032542 26034956 - MGP_LPJ_P0038735 Slc18a3 protein_coding protein_coding MGP_LPJ_T0039342.1 MGP_LPJ_G0021240.1 mouse_genomes_project 14 50021254 50033709 - MGP_LPJ_P0039342 protein_coding unknown_likely_coding MGP_LPJ_T0039343.1 MGP_LPJ_G0021240.1 mouse_genomes_project 14 50033527 50035360 - MGP_LPJ_P0039343 protein_coding protein_coding MGP_LPJ_T0012990.1 MGP_LPJ_G0011081.1 mouse_genomes_project 14 45848947 45849114 - processed_pseudogene processed_pseudogene MGP_LPJ_T0039034.1 MGP_LPJ_G0021150.1 mouse_genomes_project 14 44849266 44849959 + MGP_LPJ_P0039034 protein_coding protein_coding MGP_LPJ_T0013035.1 MGP_LPJ_G0011126.1 mouse_genomes_project 14 106357237 106357804 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006723.1 MGP_LPJ_G0005558.1 mouse_genomes_project 14 55866690 55985448 + Gm29266 lincRNA lincRNA MGP_LPJ_T0100337.1 MGP_LPJ_G0038600.1 mouse_genomes_project 14 72011826 72011960 - Gm25517 snoRNA snoRNA MGP_LPJ_T0040070.1 MGP_LPJ_G0021507.1 mouse_genomes_project 14 76255708 76277306 + MGP_LPJ_P0040070 Olfm4 protein_coding protein_coding MGP_LPJ_T0040071.1 MGP_LPJ_G0021507.1 mouse_genomes_project 14 76255731 76277306 + MGP_LPJ_P0040071 Olfm4 protein_coding unknown_likely_coding MGP_LPJ_T0039779.1 MGP_LPJ_G0021401.1 mouse_genomes_project 14 62016108 62030498 + MGP_LPJ_P0039779 Trim35 protein_coding protein_coding MGP_LPJ_T0039780.1 MGP_LPJ_G0021401.1 mouse_genomes_project 14 62016167 62027371 + MGP_LPJ_P0039780 Trim35 protein_coding protein_coding MGP_LPJ_T0039313.1 MGP_LPJ_G0021229.1 mouse_genomes_project 14 49691707 49753814 - MGP_LPJ_P0039313 Slc7a8 protein_coding protein_coding MGP_LPJ_T0039015.1 MGP_LPJ_G0021134.1 mouse_genomes_project 14 44305655 44306627 - MGP_LPJ_P0039015 Olfr729 protein_coding protein_coding MGP_LPJ_T0039312.1 MGP_LPJ_G0021228.1 mouse_genomes_project 14 49679832 49681641 - MGP_LPJ_P0039312 Cebpe protein_coding protein_coding MGP_LPJ_T0039628.1 MGP_LPJ_G0021338.1 mouse_genomes_project 14 55758182 55760899 + MGP_LPJ_P0039628 Amer2 protein_coding protein_coding MGP_LPJ_T0039714.1 MGP_LPJ_G0021376.1 mouse_genomes_project 14 59673723 59683709 - MGP_LPJ_P0039714 Prss55 protein_coding protein_coding MGP_LPJ_T0039715.1 MGP_LPJ_G0021376.1 mouse_genomes_project 14 59673730 59683666 - MGP_LPJ_P0039715 Prss55 protein_coding protein_coding MGP_LPJ_T0039716.1 MGP_LPJ_G0021376.1 mouse_genomes_project 14 59677636 59688393 - Prss55 protein_coding processed_transcript MGP_LPJ_T0013000.1 MGP_LPJ_G0011091.1 mouse_genomes_project 14 48547597 48548032 - processed_pseudogene processed_pseudogene MGP_LPJ_T0038490.1 MGP_LPJ_G0020980.1 mouse_genomes_project 14 20172024 20244918 - MGP_LPJ_P0038490 Appl1 protein_coding protein_coding MGP_LPJ_T0038491.1 MGP_LPJ_G0020980.1 mouse_genomes_project 14 20224756 20232092 - Appl1 protein_coding retained_intron MGP_LPJ_T0038492.1 MGP_LPJ_G0020980.1 mouse_genomes_project 14 20226053 20244185 - Appl1 protein_coding retained_intron MGP_LPJ_T0038493.1 MGP_LPJ_G0020980.1 mouse_genomes_project 14 20236291 20244148 - Appl1 protein_coding retained_intron MGP_LPJ_T0038495.1 MGP_LPJ_G0020982.1 mouse_genomes_project 14 20330150 20407870 + MGP_LPJ_P0038495 Il17rd protein_coding protein_coding MGP_LPJ_T0039712.1 MGP_LPJ_G0021374.1 mouse_genomes_project 14 59559342 59577322 - MGP_LPJ_P0039712 4930578I06Rik protein_coding protein_coding MGP_LPJ_T0039625.1 MGP_LPJ_G0021336.1 mouse_genomes_project 14 55597106 55631162 - MGP_LPJ_P0039625 Nupl1 protein_coding protein_coding MGP_LPJ_T0002679.1 MGP_LPJ_G0002565.1 mouse_genomes_project 14 48567188 48567722 + MGP_LPJ_P0002679 TR_V_gene TR_V_gene MGP_LPJ_T0039616.1 MGP_LPJ_G0021333.1 mouse_genomes_project 14 54967747 54974113 + MGP_LPJ_P0039616 Shisa2 protein_coding protein_coding MGP_LPJ_T0040043.1 MGP_LPJ_G0021495.1 mouse_genomes_project 14 75057929 75404863 + MGP_LPJ_P0040043 Vwa8 protein_coding protein_coding MGP_LPJ_T0002543.1 MGP_LPJ_G0002442.1 mouse_genomes_project 14 49125835 49125898 + MGP_LPJ_P0002543 Traj46 TR_J_gene TR_J_gene MGP_LPJ_T0040189.1 MGP_LPJ_G0021548.1 mouse_genomes_project 14 116607486 116647986 - MGP_LPJ_P0040189 Dct protein_coding protein_coding MGP_LPJ_T0002540.1 MGP_LPJ_G0002440.1 mouse_genomes_project 14 49123240 49123301 + MGP_LPJ_P0002540 Traj48 TR_J_gene TR_J_gene MGP_LPJ_T0002541.1 MGP_LPJ_G0002440.1 mouse_genomes_project 14 49123241 49123301 + Traj48 TR_J_gene processed_transcript MGP_LPJ_T0099046.1 MGP_LPJ_G0037309.1 mouse_genomes_project 14 10724019 10724082 + Gm27851 snRNA snRNA MGP_LPJ_T0006754.1 MGP_LPJ_G0005582.1 mouse_genomes_project 14 122830846 122856079 + 1700024B18Rik lincRNA lincRNA MGP_LPJ_T0038553.1 MGP_LPJ_G0021001.1 mouse_genomes_project 14 24293853 24351856 + MGP_LPJ_P0038553 Tmem110 protein_coding protein_coding MGP_LPJ_T0038554.1 MGP_LPJ_G0021001.1 mouse_genomes_project 14 24293857 24349440 + MGP_LPJ_P0038554 Tmem110 protein_coding nonsense_mediated_decay MGP_LPJ_T0038555.1 MGP_LPJ_G0021001.1 mouse_genomes_project 14 24341314 24349834 + Tmem110 protein_coding processed_transcript MGP_LPJ_T0038556.1 MGP_LPJ_G0021001.1 mouse_genomes_project 14 24345381 24347422 + Tmem110 protein_coding retained_intron MGP_LPJ_T0038557.1 MGP_LPJ_G0021001.1 mouse_genomes_project 14 24347224 24349870 + Tmem110 protein_coding retained_intron MGP_LPJ_T0002576.1 MGP_LPJ_G0002475.1 mouse_genomes_project 14 49166602 49166661 + MGP_LPJ_P0002576 Traj11 TR_J_gene TR_J_gene MGP_LPJ_T0010010.1 MGP_LPJ_G0008128.1 mouse_genomes_project 14 57056112 57056196 - Mir15a miRNA miRNA MGP_LPJ_T0039014.1 MGP_LPJ_G0021133.1 mouse_genomes_project 14 44296475 44297411 - MGP_LPJ_P0039014 Olfr728 protein_coding protein_coding MGP_LPJ_T0039492.1 MGP_LPJ_G0021274.1 mouse_genomes_project 14 50855973 50857775 + MGP_LPJ_P0039492 Ltb4r2 protein_coding protein_coding MGP_LPJ_T0012992.1 MGP_LPJ_G0011083.1 mouse_genomes_project 14 47006929 47007696 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006718.1 MGP_LPJ_G0005554.1 mouse_genomes_project 14 50958537 50970156 - Gm26751 lincRNA lincRNA MGP_LPJ_T0006743.1 MGP_LPJ_G0005572.1 mouse_genomes_project 14 76080458 76211487 + Gm6999 lincRNA lincRNA MGP_LPJ_T0038721.1 MGP_LPJ_G0021035.1 mouse_genomes_project 14 25757764 25800364 + Parg protein_coding retained_intron MGP_LPJ_T0038722.1 MGP_LPJ_G0021035.1 mouse_genomes_project 14 25757764 25858644 + MGP_LPJ_P0038722 Parg protein_coding protein_coding MGP_LPJ_T0038723.1 MGP_LPJ_G0021035.1 mouse_genomes_project 14 25757764 25858314 + MGP_LPJ_P0038723 Parg protein_coding protein_coding MGP_LPJ_T0038724.1 MGP_LPJ_G0021035.1 mouse_genomes_project 14 25757764 25856751 + MGP_LPJ_P0038724 Parg protein_coding protein_coding MGP_LPJ_T0038725.1 MGP_LPJ_G0021035.1 mouse_genomes_project 14 25757786 25765164 + MGP_LPJ_P0038725 Parg protein_coding protein_coding MGP_LPJ_T0038726.1 MGP_LPJ_G0021035.1 mouse_genomes_project 14 25757848 25858314 + MGP_LPJ_P0038726 Parg protein_coding nonsense_mediated_decay MGP_LPJ_T0038727.1 MGP_LPJ_G0021035.1 mouse_genomes_project 14 25758252 25765115 + Parg protein_coding processed_transcript MGP_LPJ_T0038728.1 MGP_LPJ_G0021035.1 mouse_genomes_project 14 25770377 25799529 + MGP_LPJ_P0038728 Parg protein_coding nonsense_mediated_decay MGP_LPJ_T0038729.1 MGP_LPJ_G0021035.1 mouse_genomes_project 14 25799436 25822606 + Parg protein_coding processed_transcript MGP_LPJ_T0038730.1 MGP_LPJ_G0021035.1 mouse_genomes_project 14 25836823 25857438 + Parg protein_coding processed_transcript MGP_LPJ_T0099050.1 MGP_LPJ_G0037313.1 mouse_genomes_project 14 14867020 14867165 + Gm23502 snRNA snRNA MGP_LPJ_T0038733.1 MGP_LPJ_G0021037.1 mouse_genomes_project 14 25950427 25962360 - MGP_LPJ_P0038733 1700024G13Rik protein_coding protein_coding MGP_LPJ_T0017346.1 MGP_LPJ_G0015190.1 mouse_genomes_project 14 63114192 63183260 - 4930438E09Rik processed_transcript processed_transcript MGP_LPJ_T0039501.1 MGP_LPJ_G0021280.1 mouse_genomes_project 14 50975727 50981064 - MGP_LPJ_P0039501 Cbln3 protein_coding protein_coding MGP_LPJ_T0039502.1 MGP_LPJ_G0021280.1 mouse_genomes_project 14 50978868 50981040 - MGP_LPJ_P0039502 Cbln3 protein_coding protein_coding MGP_LPJ_T0038432.1 MGP_LPJ_G0020964.1 mouse_genomes_project 14 17671158 17709521 - MGP_LPJ_P0038432 Polr3a protein_coding protein_coding MGP_LPJ_T0100344.1 MGP_LPJ_G0038607.1 mouse_genomes_project 14 89113745 89113875 - Gm24127 snoRNA snoRNA MGP_LPJ_T0038455.1 MGP_LPJ_G0020973.1 mouse_genomes_project 14 19650322 19782781 - MGP_LPJ_P0038455 Slmap protein_coding protein_coding MGP_LPJ_T0038456.1 MGP_LPJ_G0020973.1 mouse_genomes_project 14 19650327 19713467 - MGP_LPJ_P0038456 Slmap protein_coding protein_coding MGP_LPJ_T0038457.1 MGP_LPJ_G0020973.1 mouse_genomes_project 14 19650328 19699678 - MGP_LPJ_P0038457 Slmap protein_coding protein_coding MGP_LPJ_T0038458.1 MGP_LPJ_G0020973.1 mouse_genomes_project 14 19650329 19781590 - MGP_LPJ_P0038458 Slmap protein_coding protein_coding MGP_LPJ_T0038459.1 MGP_LPJ_G0020973.1 mouse_genomes_project 14 19650554 19781468 - MGP_LPJ_P0038459 Slmap protein_coding protein_coding MGP_LPJ_T0038460.1 MGP_LPJ_G0020973.1 mouse_genomes_project 14 19650554 19781468 - MGP_LPJ_P0038460 Slmap protein_coding protein_coding MGP_LPJ_T0038461.1 MGP_LPJ_G0020973.1 mouse_genomes_project 14 19651450 19782745 - MGP_LPJ_P0038461 Slmap protein_coding protein_coding MGP_LPJ_T0038462.1 MGP_LPJ_G0020973.1 mouse_genomes_project 14 19651884 19699665 - MGP_LPJ_P0038462 Slmap protein_coding protein_coding MGP_LPJ_T0038463.1 MGP_LPJ_G0020973.1 mouse_genomes_project 14 19659611 19680827 - MGP_LPJ_P0038463 Slmap protein_coding protein_coding MGP_LPJ_T0038464.1 MGP_LPJ_G0020973.1 mouse_genomes_project 14 19664394 19680658 - Slmap protein_coding processed_transcript MGP_LPJ_T0038465.1 MGP_LPJ_G0020973.1 mouse_genomes_project 14 19664470 19667247 - Slmap protein_coding retained_intron MGP_LPJ_T0038466.1 MGP_LPJ_G0020973.1 mouse_genomes_project 14 19664693 19680893 - MGP_LPJ_P0038466 Slmap protein_coding protein_coding MGP_LPJ_T0038467.1 MGP_LPJ_G0020973.1 mouse_genomes_project 14 19665419 19677224 - Slmap protein_coding retained_intron MGP_LPJ_T0038468.1 MGP_LPJ_G0020973.1 mouse_genomes_project 14 19675162 19680741 - Slmap protein_coding retained_intron MGP_LPJ_T0038469.1 MGP_LPJ_G0020973.1 mouse_genomes_project 14 19680626 19703187 - MGP_LPJ_P0038469 Slmap protein_coding protein_coding MGP_LPJ_T0038470.1 MGP_LPJ_G0020973.1 mouse_genomes_project 14 19699292 19703178 - Slmap protein_coding retained_intron MGP_LPJ_T0040039.1 MGP_LPJ_G0021492.1 mouse_genomes_project 14 74432236 74464862 - MGP_LPJ_P0040039 Tnfsf11 protein_coding protein_coding MGP_LPJ_T0003585.1 MGP_LPJ_G0003255.1 mouse_genomes_project 14 59182634 59187473 - Gm15918 antisense antisense MGP_LPJ_T0040175.1 MGP_LPJ_G0021541.1 mouse_genomes_project 14 103516587 103517915 - MGP_LPJ_P0040175 Gm4775 protein_coding protein_coding MGP_LPJ_T0000944.1 MGP_LPJ_G0000872.1 mouse_genomes_project 14 47011141 47013485 - TEC TEC MGP_LPJ_T0038266.1 MGP_LPJ_G0020923.1 mouse_genomes_project 14 11249956 11580278 - MGP_LPJ_P0038266 Ube2e2 protein_coding nonsense_mediated_decay MGP_LPJ_T0038267.1 MGP_LPJ_G0020923.1 mouse_genomes_project 14 11249958 11585616 - MGP_LPJ_P0038267 Ube2e2 protein_coding protein_coding MGP_LPJ_T0038268.1 MGP_LPJ_G0020923.1 mouse_genomes_project 14 11250423 11580126 - MGP_LPJ_P0038268 Ube2e2 protein_coding protein_coding MGP_LPJ_T0038269.1 MGP_LPJ_G0020923.1 mouse_genomes_project 14 11250676 11580270 - MGP_LPJ_P0038269 Ube2e2 protein_coding protein_coding MGP_LPJ_T0038270.1 MGP_LPJ_G0020923.1 mouse_genomes_project 14 11250745 11276158 - Ube2e2 protein_coding processed_transcript MGP_LPJ_T0038271.1 MGP_LPJ_G0020923.1 mouse_genomes_project 14 11250745 11580222 - MGP_LPJ_P0038271 Ube2e2 protein_coding protein_coding MGP_LPJ_T0038272.1 MGP_LPJ_G0020923.1 mouse_genomes_project 14 11264766 11352684 - Ube2e2 protein_coding processed_transcript MGP_LPJ_T0038273.1 MGP_LPJ_G0020923.1 mouse_genomes_project 14 11264766 11585239 - MGP_LPJ_P0038273 Ube2e2 protein_coding protein_coding MGP_LPJ_T0038274.1 MGP_LPJ_G0020923.1 mouse_genomes_project 14 11276050 11585558 - Ube2e2 protein_coding processed_transcript MGP_LPJ_T0038275.1 MGP_LPJ_G0020923.1 mouse_genomes_project 14 11310339 11585470 - MGP_LPJ_P0038275 Ube2e2 protein_coding protein_coding MGP_LPJ_T0038276.1 MGP_LPJ_G0020923.1 mouse_genomes_project 14 11310351 11586121 - MGP_LPJ_P0038276 Ube2e2 protein_coding protein_coding MGP_LPJ_T0038277.1 MGP_LPJ_G0020923.1 mouse_genomes_project 14 11310409 11585470 - Ube2e2 protein_coding processed_transcript MGP_LPJ_T0038278.1 MGP_LPJ_G0020923.1 mouse_genomes_project 14 11318377 11585533 - Ube2e2 protein_coding processed_transcript MGP_LPJ_T0038279.1 MGP_LPJ_G0020923.1 mouse_genomes_project 14 11578185 11585104 - Ube2e2 protein_coding retained_intron MGP_LPJ_T0100311.1 MGP_LPJ_G0038574.1 mouse_genomes_project 14 24503867 24503947 - Snord69 snoRNA snoRNA MGP_LPJ_T0011386.1 MGP_LPJ_G0009504.1 mouse_genomes_project 14 29283627 29283795 + Gm27617 misc_RNA misc_RNA MGP_LPJ_T0099055.1 MGP_LPJ_G0037318.1 mouse_genomes_project 14 34220760 34220867 + Gm24388 snRNA snRNA MGP_LPJ_T0038833.1 MGP_LPJ_G0021078.1 mouse_genomes_project 14 30849783 30859547 + MGP_LPJ_P0038833 Lrit1 protein_coding protein_coding MGP_LPJ_T0100352.1 MGP_LPJ_G0038615.1 mouse_genomes_project 14 97689010 97689134 - Gm24345 snoRNA snoRNA MGP_LPJ_T0039847.1 MGP_LPJ_G0021426.1 mouse_genomes_project 14 65565422 65582279 - MGP_LPJ_P0039847 Chmp7 protein_coding protein_coding MGP_LPJ_T0002641.1 MGP_LPJ_G0002530.1 mouse_genomes_project 14 47515794 47516354 + MGP_LPJ_P0002641 TR_V_gene TR_V_gene MGP_LPJ_T0039079.1 MGP_LPJ_G0021171.1 mouse_genomes_project 14 45373353 45376576 + MGP_LPJ_P0039079 Eddm3b protein_coding protein_coding MGP_LPJ_T0100333.1 MGP_LPJ_G0038596.1 mouse_genomes_project 14 63367049 63367181 + Gm24981 snoRNA snoRNA MGP_LPJ_T0098167.1 MGP_LPJ_G0036448.1 mouse_genomes_project 14 73659889 73659999 + n-R5s48 rRNA rRNA MGP_LPJ_T0039031.1 MGP_LPJ_G0021147.1 mouse_genomes_project 14 44658108 44658734 + MGP_LPJ_P0039031 protein_coding protein_coding MGP_LPJ_T0039903.1 MGP_LPJ_G0021449.1 mouse_genomes_project 14 66502443 66533679 - MGP_LPJ_P0039903 Dmtn protein_coding protein_coding MGP_LPJ_T0039904.1 MGP_LPJ_G0021449.1 mouse_genomes_project 14 66502444 66530595 - MGP_LPJ_P0039904 Dmtn protein_coding protein_coding MGP_LPJ_T0039905.1 MGP_LPJ_G0021449.1 mouse_genomes_project 14 66502444 66540549 - MGP_LPJ_P0039905 Dmtn protein_coding protein_coding MGP_LPJ_T0006724.1 MGP_LPJ_G0005559.1 mouse_genomes_project 14 57050103 57051516 - Gm27010 lincRNA lincRNA MGP_LPJ_T0011389.1 MGP_LPJ_G0009507.1 mouse_genomes_project 14 49076338 49076678 + Gm23704 misc_RNA misc_RNA MGP_LPJ_T0039531.1 MGP_LPJ_G0021302.1 mouse_genomes_project 14 51889970 51947612 - MGP_LPJ_P0039531 Pspc1 protein_coding protein_coding MGP_LPJ_T0039532.1 MGP_LPJ_G0021302.1 mouse_genomes_project 14 51891515 51947612 - MGP_LPJ_P0039532 Pspc1 protein_coding protein_coding MGP_LPJ_T0039533.1 MGP_LPJ_G0021302.1 mouse_genomes_project 14 51917323 51930542 - Pspc1 protein_coding retained_intron MGP_LPJ_T0039534.1 MGP_LPJ_G0021302.1 mouse_genomes_project 14 51917646 51947223 - MGP_LPJ_P0039534 Pspc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0002664.1 MGP_LPJ_G0002552.1 mouse_genomes_project 14 48308393 48308945 + MGP_LPJ_P0002664 TR_V_gene TR_V_gene MGP_LPJ_T0099079.1 MGP_LPJ_G0037342.1 mouse_genomes_project 14 93372822 93372938 + Gm24043 snRNA snRNA MGP_LPJ_T0002688.1 MGP_LPJ_G0002572.1 mouse_genomes_project 14 48748686 48749163 + MGP_LPJ_P0002688 Trav17 TR_V_gene TR_V_gene MGP_LPJ_T0002689.1 MGP_LPJ_G0002572.1 mouse_genomes_project 14 48748686 48749163 + MGP_LPJ_P0002689 Trav17 TR_V_gene TR_V_gene MGP_LPJ_T0039541.1 MGP_LPJ_G0021309.1 mouse_genomes_project 14 52313318 52316696 - MGP_LPJ_P0039541 Gm4491 protein_coding protein_coding MGP_LPJ_T0013006.1 MGP_LPJ_G0011097.1 mouse_genomes_project 14 51962288 51975288 - processed_pseudogene processed_pseudogene MGP_LPJ_T0039499.1 MGP_LPJ_G0021279.1 mouse_genomes_project 14 50948264 50969712 + MGP_LPJ_P0039499 Nynrin protein_coding protein_coding MGP_LPJ_T0039500.1 MGP_LPJ_G0021279.1 mouse_genomes_project 14 50948343 50970156 + MGP_LPJ_P0039500 Nynrin protein_coding protein_coding MGP_LPJ_T0038862.1 MGP_LPJ_G0021092.1 mouse_genomes_project 14 35041439 35054426 - MGP_LPJ_P0038862 Sftpd protein_coding protein_coding MGP_LPJ_T0039334.1 MGP_LPJ_G0021235.1 mouse_genomes_project 14 49908855 49915278 - MGP_LPJ_P0039334 Slc22a17 protein_coding protein_coding MGP_LPJ_T0039421.1 MGP_LPJ_G0021258.1 mouse_genomes_project 14 50667537 50671575 - MGP_LPJ_P0039421 Psme2 protein_coding protein_coding MGP_LPJ_T0039422.1 MGP_LPJ_G0021258.1 mouse_genomes_project 14 50667538 50671589 - MGP_LPJ_P0039422 Psme2 protein_coding protein_coding MGP_LPJ_T0039423.1 MGP_LPJ_G0021258.1 mouse_genomes_project 14 50667543 50668903 - Psme2 protein_coding retained_intron MGP_LPJ_T0039424.1 MGP_LPJ_G0021258.1 mouse_genomes_project 14 50667543 50669810 - Psme2 protein_coding retained_intron MGP_LPJ_T0039425.1 MGP_LPJ_G0021258.1 mouse_genomes_project 14 50668352 50670637 - Psme2 protein_coding retained_intron MGP_LPJ_T0039426.1 MGP_LPJ_G0021258.1 mouse_genomes_project 14 50668370 50671601 - MGP_LPJ_P0039426 Psme2 protein_coding protein_coding MGP_LPJ_T0039427.1 MGP_LPJ_G0021258.1 mouse_genomes_project 14 50668381 50671352 - Psme2 protein_coding retained_intron MGP_LPJ_T0039428.1 MGP_LPJ_G0021258.1 mouse_genomes_project 14 50669492 50671461 - Psme2 protein_coding retained_intron MGP_LPJ_T0039429.1 MGP_LPJ_G0021258.1 mouse_genomes_project 14 50669615 50671436 - Psme2 protein_coding retained_intron MGP_LPJ_T0039430.1 MGP_LPJ_G0021258.1 mouse_genomes_project 14 50670485 50671383 - Psme2 protein_coding retained_intron MGP_LPJ_T0039757.1 MGP_LPJ_G0021394.1 mouse_genomes_project 14 61601574 61635934 - MGP_LPJ_P0039757 Scara3 protein_coding protein_coding MGP_LPJ_T0011395.1 MGP_LPJ_G0009513.1 mouse_genomes_project 14 60840616 60840692 - Gm27263 misc_RNA misc_RNA MGP_LPJ_T0097992.1 MGP_LPJ_G0036273.1 mouse_genomes_project 14 104160988 104161177 - pseudogene pseudogene MGP_LPJ_T0038255.1 MGP_LPJ_G0020921.1 mouse_genomes_project 14 10948841 10959427 + MGP_LPJ_P0038255 Nkiras1 protein_coding protein_coding MGP_LPJ_T0038256.1 MGP_LPJ_G0020921.1 mouse_genomes_project 14 10948891 10957072 + MGP_LPJ_P0038256 Nkiras1 protein_coding protein_coding MGP_LPJ_T0038257.1 MGP_LPJ_G0020921.1 mouse_genomes_project 14 10948909 10954351 + Nkiras1 protein_coding retained_intron MGP_LPJ_T0038258.1 MGP_LPJ_G0020921.1 mouse_genomes_project 14 10948916 10955434 + Nkiras1 protein_coding processed_transcript MGP_LPJ_T0038259.1 MGP_LPJ_G0020921.1 mouse_genomes_project 14 10948932 10957467 + MGP_LPJ_P0038259 Nkiras1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038260.1 MGP_LPJ_G0020921.1 mouse_genomes_project 14 10948943 10954106 + Nkiras1 protein_coding retained_intron MGP_LPJ_T0038261.1 MGP_LPJ_G0020921.1 mouse_genomes_project 14 10948969 10955575 + Nkiras1 protein_coding processed_transcript MGP_LPJ_T0002741.1 MGP_LPJ_G0002613.1 mouse_genomes_project 14 47983731 47984000 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0039507.1 MGP_LPJ_G0021285.1 mouse_genomes_project 14 51165030 51167542 + MGP_LPJ_P0039507 Mcpt2 protein_coding protein_coding MGP_LPJ_T0039676.1 MGP_LPJ_G0021359.1 mouse_genomes_project 14 58506882 58509831 + MGP_LPJ_P0039676 Defb47 protein_coding protein_coding MGP_LPJ_T0038252.1 MGP_LPJ_G0020919.1 mouse_genomes_project 14 10865545 10904406 - MGP_LPJ_P0038252 Nr1d2 protein_coding protein_coding MGP_LPJ_T0038756.1 MGP_LPJ_G0021048.1 mouse_genomes_project 14 26829379 26832386 + Arhgap22 protein_coding processed_transcript MGP_LPJ_T0038757.1 MGP_LPJ_G0021048.1 mouse_genomes_project 14 26829587 26987667 + MGP_LPJ_P0038757 Arhgap22 protein_coding unknown_likely_coding MGP_LPJ_T0038758.1 MGP_LPJ_G0021048.1 mouse_genomes_project 14 26864892 26887136 + Arhgap22 protein_coding processed_transcript MGP_LPJ_T0038759.1 MGP_LPJ_G0021048.1 mouse_genomes_project 14 26922922 26987657 + Arhgap22 protein_coding processed_transcript MGP_LPJ_T0038760.1 MGP_LPJ_G0021048.1 mouse_genomes_project 14 26936370 26987659 + MGP_LPJ_P0038760 Arhgap22 protein_coding protein_coding MGP_LPJ_T0038761.1 MGP_LPJ_G0021048.1 mouse_genomes_project 14 26969088 26980336 + Arhgap22 protein_coding processed_transcript MGP_LPJ_T0038762.1 MGP_LPJ_G0021048.1 mouse_genomes_project 14 26980057 26982221 + Arhgap22 protein_coding processed_transcript MGP_LPJ_T0038763.1 MGP_LPJ_G0021048.1 mouse_genomes_project 14 26980136 26981093 + Arhgap22 protein_coding processed_transcript MGP_LPJ_T0038879.1 MGP_LPJ_G0021098.1 mouse_genomes_project 14 39186703 39227444 - MGP_LPJ_P0038879 Ero1l protein_coding protein_coding MGP_LPJ_T0006700.1 MGP_LPJ_G0005542.1 mouse_genomes_project 14 40392248 40411080 + Gm15221 lincRNA lincRNA MGP_LPJ_T0006748.1 MGP_LPJ_G0005576.1 mouse_genomes_project 14 116711221 116720481 + Gm26773 lincRNA lincRNA MGP_LPJ_T0006753.1 MGP_LPJ_G0005581.1 mouse_genomes_project 14 119087202 119091873 - Gm26679 lincRNA lincRNA MGP_LPJ_T0003564.1 MGP_LPJ_G0003240.1 mouse_genomes_project 14 48870050 48900238 - antisense antisense MGP_LPJ_T0013002.1 MGP_LPJ_G0011093.1 mouse_genomes_project 14 49287832 49288516 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002534.1 MGP_LPJ_G0002435.1 mouse_genomes_project 14 49111650 49111713 + MGP_LPJ_P0002534 Traj56 TR_J_gene TR_J_gene MGP_LPJ_T0038381.1 MGP_LPJ_G0020956.1 mouse_genomes_project 14 14800913 14845543 + MGP_LPJ_P0038381 Samd8 protein_coding protein_coding MGP_LPJ_T0038382.1 MGP_LPJ_G0020956.1 mouse_genomes_project 14 14800930 14845543 + MGP_LPJ_P0038382 Samd8 protein_coding nonsense_mediated_decay MGP_LPJ_T0038383.1 MGP_LPJ_G0020956.1 mouse_genomes_project 14 14801183 14845481 + MGP_LPJ_P0038383 Samd8 protein_coding unknown_likely_coding MGP_LPJ_T0038384.1 MGP_LPJ_G0020956.1 mouse_genomes_project 14 14801934 14850941 + MGP_LPJ_P0038384 Samd8 protein_coding protein_coding MGP_LPJ_T0038385.1 MGP_LPJ_G0020956.1 mouse_genomes_project 14 14844106 14845215 + Samd8 protein_coding retained_intron MGP_LPJ_T0100363.1 MGP_LPJ_G0038626.1 mouse_genomes_project 14 122774646 122774774 + Gm25272 snoRNA snoRNA MGP_LPJ_T0038426.1 MGP_LPJ_G0020963.1 mouse_genomes_project 14 17486148 17498576 + MGP_LPJ_P0038426 E330034G19Rik protein_coding protein_coding MGP_LPJ_T0038427.1 MGP_LPJ_G0020963.1 mouse_genomes_project 14 17486170 17496881 + MGP_LPJ_P0038427 E330034G19Rik protein_coding protein_coding MGP_LPJ_T0038428.1 MGP_LPJ_G0020963.1 mouse_genomes_project 14 17486218 17491218 + E330034G19Rik protein_coding retained_intron MGP_LPJ_T0038429.1 MGP_LPJ_G0020963.1 mouse_genomes_project 14 17486253 17498583 + MGP_LPJ_P0038429 E330034G19Rik protein_coding protein_coding MGP_LPJ_T0038430.1 MGP_LPJ_G0020963.1 mouse_genomes_project 14 17486266 17490987 + MGP_LPJ_P0038430 E330034G19Rik protein_coding protein_coding MGP_LPJ_T0038431.1 MGP_LPJ_G0020963.1 mouse_genomes_project 14 17486298 17498576 + MGP_LPJ_P0038431 E330034G19Rik protein_coding protein_coding MGP_LPJ_T0039658.1 MGP_LPJ_G0021350.1 mouse_genomes_project 14 57029935 57035177 + MGP_LPJ_P0039658 Kcnrg protein_coding protein_coding MGP_LPJ_T0039247.1 MGP_LPJ_G0021212.1 mouse_genomes_project 14 49322282 49364130 - MGP_LPJ_P0039247 Slc7a7 protein_coding protein_coding MGP_LPJ_T0039248.1 MGP_LPJ_G0021212.1 mouse_genomes_project 14 49322284 49372056 - MGP_LPJ_P0039248 Slc7a7 protein_coding protein_coding MGP_LPJ_T0039249.1 MGP_LPJ_G0021212.1 mouse_genomes_project 14 49322285 49364865 - MGP_LPJ_P0039249 Slc7a7 protein_coding protein_coding MGP_LPJ_T0039250.1 MGP_LPJ_G0021212.1 mouse_genomes_project 14 49326188 49336615 - Slc7a7 protein_coding processed_transcript MGP_LPJ_T0039251.1 MGP_LPJ_G0021212.1 mouse_genomes_project 14 49326637 49350068 - Slc7a7 protein_coding processed_transcript MGP_LPJ_T0039252.1 MGP_LPJ_G0021212.1 mouse_genomes_project 14 49331445 49365249 - MGP_LPJ_P0039252 Slc7a7 protein_coding protein_coding MGP_LPJ_T0039253.1 MGP_LPJ_G0021212.1 mouse_genomes_project 14 49363488 49366815 - MGP_LPJ_P0039253 Slc7a7 protein_coding protein_coding MGP_LPJ_T0039254.1 MGP_LPJ_G0021212.1 mouse_genomes_project 14 49363625 49372137 - MGP_LPJ_P0039254 Slc7a7 protein_coding protein_coding MGP_LPJ_T0100336.1 MGP_LPJ_G0038599.1 mouse_genomes_project 14 71876810 71876940 + Snora31 snoRNA snoRNA MGP_LPJ_T0038474.1 MGP_LPJ_G0020976.1 mouse_genomes_project 14 19885249 19906208 + MGP_LPJ_P0038474 Arf4 protein_coding protein_coding MGP_LPJ_T0038475.1 MGP_LPJ_G0020976.1 mouse_genomes_project 14 19885401 19905751 + MGP_LPJ_P0038475 Arf4 protein_coding nonsense_mediated_decay MGP_LPJ_T0038476.1 MGP_LPJ_G0020976.1 mouse_genomes_project 14 19885428 19905758 + Arf4 protein_coding processed_transcript MGP_LPJ_T0038477.1 MGP_LPJ_G0020976.1 mouse_genomes_project 14 19885522 19905764 + MGP_LPJ_P0038477 Arf4 protein_coding protein_coding MGP_LPJ_T0038478.1 MGP_LPJ_G0020976.1 mouse_genomes_project 14 19901960 19902807 + Arf4 protein_coding retained_intron MGP_LPJ_T0038479.1 MGP_LPJ_G0020976.1 mouse_genomes_project 14 19902080 19913996 + MGP_LPJ_P0038479 Arf4 protein_coding nonsense_mediated_decay MGP_LPJ_T0039790.1 MGP_LPJ_G0021403.1 mouse_genomes_project 14 62362553 62465364 + MGP_LPJ_P0039790 Adra1a protein_coding protein_coding MGP_LPJ_T0039791.1 MGP_LPJ_G0021403.1 mouse_genomes_project 14 62362560 62465228 + MGP_LPJ_P0039791 Adra1a protein_coding protein_coding MGP_LPJ_T0039792.1 MGP_LPJ_G0021403.1 mouse_genomes_project 14 62362611 62367625 + Adra1a protein_coding retained_intron MGP_LPJ_T0039793.1 MGP_LPJ_G0021403.1 mouse_genomes_project 14 62362643 62461884 + MGP_LPJ_P0039793 Adra1a protein_coding protein_coding MGP_LPJ_T0039794.1 MGP_LPJ_G0021403.1 mouse_genomes_project 14 62362858 62464640 + MGP_LPJ_P0039794 Adra1a protein_coding protein_coding MGP_LPJ_T0010038.1 MGP_LPJ_G0008156.1 mouse_genomes_project 14 116867823 116867926 + Mir6241 miRNA miRNA MGP_LPJ_T0002609.1 MGP_LPJ_G0002506.1 mouse_genomes_project 14 49178356 49178385 + TR_J_pseudogene TR_J_pseudogene MGP_LPJ_T0039642.1 MGP_LPJ_G0021343.1 mouse_genomes_project 14 56546515 56648864 + MGP_LPJ_P0039642 protein_coding protein_coding MGP_LPJ_T0039643.1 MGP_LPJ_G0021343.1 mouse_genomes_project 14 56546549 56607392 + MGP_LPJ_P0039643 protein_coding protein_coding MGP_LPJ_T0039644.1 MGP_LPJ_G0021343.1 mouse_genomes_project 14 56556086 56623224 + MGP_LPJ_P0039644 protein_coding protein_coding MGP_LPJ_T0039645.1 MGP_LPJ_G0021343.1 mouse_genomes_project 14 56580897 56603379 + MGP_LPJ_P0039645 protein_coding protein_coding MGP_LPJ_T0039646.1 MGP_LPJ_G0021343.1 mouse_genomes_project 14 56581112 56623229 + MGP_LPJ_P0039646 protein_coding unknown_likely_coding MGP_LPJ_T0039647.1 MGP_LPJ_G0021343.1 mouse_genomes_project 14 56596555 56612647 + protein_coding retained_intron MGP_LPJ_T0039337.1 MGP_LPJ_G0021238.1 mouse_genomes_project 14 49938772 49941349 + MGP_LPJ_P0039337 Cmtm5 protein_coding protein_coding MGP_LPJ_T0099067.1 MGP_LPJ_G0037330.1 mouse_genomes_project 14 51567195 51567298 + Gm24667 snRNA snRNA MGP_LPJ_T0039736.1 MGP_LPJ_G0021383.1 mouse_genomes_project 14 60677872 60724579 - MGP_LPJ_P0039736 Extl3 protein_coding protein_coding MGP_LPJ_T0040137.1 MGP_LPJ_G0021530.1 mouse_genomes_project 14 100376433 100385974 + MGP_LPJ_P0040137 Cln5 protein_coding protein_coding MGP_LPJ_T0039344.1 MGP_LPJ_G0021241.1 mouse_genomes_project 14 50050435 50050526 + MGP_LPJ_P0039344 Gm17428 protein_coding protein_coding MGP_LPJ_T0002630.1 MGP_LPJ_G0002522.1 mouse_genomes_project 14 47418277 47419943 + MGP_LPJ_P0002630 TR_V_gene TR_V_gene MGP_LPJ_T0002633.1 MGP_LPJ_G0002522.1 mouse_genomes_project 14 47419638 47419943 + MGP_LPJ_P0002633 TR_V_gene TR_V_gene MGP_LPJ_T0012989.1 MGP_LPJ_G0011080.1 mouse_genomes_project 14 44994917 44995360 + processed_pseudogene processed_pseudogene MGP_LPJ_T0040097.1 MGP_LPJ_G0021518.1 mouse_genomes_project 14 96153655 96176952 - MGP_LPJ_P0040097 Dis3 protein_coding protein_coding MGP_LPJ_T0040091.1 MGP_LPJ_G0021514.1 mouse_genomes_project 14 93021055 93457461 - MGP_LPJ_P0040091 Klhl1 protein_coding protein_coding MGP_LPJ_T0040042.1 MGP_LPJ_G0021494.1 mouse_genomes_project 14 74745608 74927469 - MGP_LPJ_P0040042 Dgkh protein_coding protein_coding MGP_LPJ_T0013009.1 MGP_LPJ_G0011100.1 mouse_genomes_project 14 52666515 52667308 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099095.1 MGP_LPJ_G0037358.1 mouse_genomes_project 14 119511130 119511214 + Gm25781 snRNA snRNA MGP_LPJ_T0010031.1 MGP_LPJ_G0008149.1 mouse_genomes_project 14 113525402 113525486 + Mir17 miRNA miRNA MGP_LPJ_T0039749.1 MGP_LPJ_G0021391.1 mouse_genomes_project 14 61482858 61495440 + MGP_LPJ_P0039749 Pbk protein_coding protein_coding MGP_LPJ_T0039750.1 MGP_LPJ_G0021391.1 mouse_genomes_project 14 61482958 61490726 + Pbk protein_coding processed_transcript MGP_LPJ_T0039751.1 MGP_LPJ_G0021391.1 mouse_genomes_project 14 61483253 61491492 + MGP_LPJ_P0039751 Pbk protein_coding protein_coding MGP_LPJ_T0040103.1 MGP_LPJ_G0021523.1 mouse_genomes_project 14 98649051 98820589 - MGP_LPJ_P0040103 Tbc1d4 protein_coding protein_coding MGP_LPJ_T0040104.1 MGP_LPJ_G0021523.1 mouse_genomes_project 14 98649059 98671280 - Tbc1d4 protein_coding retained_intron MGP_LPJ_T0040105.1 MGP_LPJ_G0021523.1 mouse_genomes_project 14 98649059 98717602 - MGP_LPJ_P0040105 Tbc1d4 protein_coding protein_coding MGP_LPJ_T0040106.1 MGP_LPJ_G0021523.1 mouse_genomes_project 14 98649258 98819857 - MGP_LPJ_P0040106 Tbc1d4 protein_coding unknown_likely_coding MGP_LPJ_T0040107.1 MGP_LPJ_G0021523.1 mouse_genomes_project 14 98650411 98820042 - MGP_LPJ_P0040107 Tbc1d4 protein_coding protein_coding MGP_LPJ_T0040108.1 MGP_LPJ_G0021523.1 mouse_genomes_project 14 98670630 98820388 - Tbc1d4 protein_coding retained_intron MGP_LPJ_T0040109.1 MGP_LPJ_G0021523.1 mouse_genomes_project 14 98670850 98820223 - Tbc1d4 protein_coding retained_intron MGP_LPJ_T0040110.1 MGP_LPJ_G0021523.1 mouse_genomes_project 14 98670850 98820223 - Tbc1d4 protein_coding retained_intron MGP_LPJ_T0040111.1 MGP_LPJ_G0021523.1 mouse_genomes_project 14 98671019 98711315 - MGP_LPJ_P0040111 Tbc1d4 protein_coding nonsense_mediated_decay MGP_LPJ_T0040112.1 MGP_LPJ_G0021523.1 mouse_genomes_project 14 98671030 98820747 - MGP_LPJ_P0040112 Tbc1d4 protein_coding protein_coding MGP_LPJ_T0040113.1 MGP_LPJ_G0021523.1 mouse_genomes_project 14 98714946 98717546 - Tbc1d4 protein_coding retained_intron MGP_LPJ_T0039831.1 MGP_LPJ_G0021417.1 mouse_genomes_project 14 64328216 64370593 - MGP_LPJ_P0039831 Adam7 protein_coding protein_coding MGP_LPJ_T0039832.1 MGP_LPJ_G0021417.1 mouse_genomes_project 14 64328726 64343630 - Adam7 protein_coding retained_intron MGP_LPJ_T0040034.1 MGP_LPJ_G0021490.1 mouse_genomes_project 14 74048874 74150024 + MGP_LPJ_P0040034 Epsti1 protein_coding protein_coding MGP_LPJ_T0040035.1 MGP_LPJ_G0021490.1 mouse_genomes_project 14 74049042 74109941 + MGP_LPJ_P0040035 Epsti1 protein_coding protein_coding MGP_LPJ_T0009993.1 MGP_LPJ_G0008111.1 mouse_genomes_project 14 19918508 19918570 - Mir7672 miRNA miRNA MGP_LPJ_T0039539.1 MGP_LPJ_G0021307.1 mouse_genomes_project 14 52234145 52256442 - MGP_LPJ_P0039539 Gja3 protein_coding protein_coding MGP_LPJ_T0038564.1 MGP_LPJ_G0021004.1 mouse_genomes_project 14 24390949 24408634 - MGP_LPJ_P0038564 Itih3 protein_coding unknown_likely_coding MGP_LPJ_T0038565.1 MGP_LPJ_G0021004.1 mouse_genomes_project 14 24390952 24408845 - MGP_LPJ_P0038565 Itih3 protein_coding protein_coding MGP_LPJ_T0038566.1 MGP_LPJ_G0021004.1 mouse_genomes_project 14 24390955 24408672 - Itih3 protein_coding retained_intron MGP_LPJ_T0038567.1 MGP_LPJ_G0021004.1 mouse_genomes_project 14 24391062 24408634 - MGP_LPJ_P0038567 Itih3 protein_coding protein_coding MGP_LPJ_T0038568.1 MGP_LPJ_G0021004.1 mouse_genomes_project 14 24392219 24397767 - MGP_LPJ_P0038568 Itih3 protein_coding protein_coding MGP_LPJ_T0038569.1 MGP_LPJ_G0021004.1 mouse_genomes_project 14 24394337 24396509 - Itih3 protein_coding retained_intron MGP_LPJ_T0000943.1 MGP_LPJ_G0000871.1 mouse_genomes_project 14 46886871 46893744 + TEC TEC MGP_LPJ_T0039855.1 MGP_LPJ_G0021434.1 mouse_genomes_project 14 66028574 66033684 - MGP_LPJ_P0039855 9930012K11Rik protein_coding protein_coding MGP_LPJ_T0039856.1 MGP_LPJ_G0021434.1 mouse_genomes_project 14 66028574 66033684 - MGP_LPJ_P0039856 9930012K11Rik protein_coding protein_coding MGP_LPJ_T0039857.1 MGP_LPJ_G0021434.1 mouse_genomes_project 14 66028577 66031086 - 9930012K11Rik protein_coding retained_intron MGP_LPJ_T0039858.1 MGP_LPJ_G0021434.1 mouse_genomes_project 14 66029067 66030635 - MGP_LPJ_P0039858 9930012K11Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0039859.1 MGP_LPJ_G0021434.1 mouse_genomes_project 14 66029200 66030978 - 9930012K11Rik protein_coding retained_intron MGP_LPJ_T0039664.1 MGP_LPJ_G0021353.1 mouse_genomes_project 14 57872152 57941144 - MGP_LPJ_P0039664 Gucy1b2 protein_coding protein_coding MGP_LPJ_T0039665.1 MGP_LPJ_G0021353.1 mouse_genomes_project 14 57872267 57941141 - MGP_LPJ_P0039665 Gucy1b2 protein_coding protein_coding MGP_LPJ_T0039666.1 MGP_LPJ_G0021353.1 mouse_genomes_project 14 57902870 57939647 - MGP_LPJ_P0039666 Gucy1b2 protein_coding protein_coding MGP_LPJ_T0038573.1 MGP_LPJ_G0021006.1 mouse_genomes_project 14 24438043 24473986 + MGP_LPJ_P0038573 Nek4 protein_coding protein_coding MGP_LPJ_T0099074.1 MGP_LPJ_G0037337.1 mouse_genomes_project 14 78667721 78667885 - Gm22891 snRNA snRNA MGP_LPJ_T0002553.1 MGP_LPJ_G0002452.1 mouse_genomes_project 14 49137220 49137282 + MGP_LPJ_P0002553 Traj35 TR_J_gene TR_J_gene MGP_LPJ_T0039521.1 MGP_LPJ_G0021299.1 mouse_genomes_project 14 51683444 51732014 - MGP_LPJ_P0039521 Cenpj protein_coding protein_coding MGP_LPJ_T0039522.1 MGP_LPJ_G0021299.1 mouse_genomes_project 14 51683602 51731974 - MGP_LPJ_P0039522 Cenpj protein_coding unknown_likely_coding MGP_LPJ_T0039523.1 MGP_LPJ_G0021299.1 mouse_genomes_project 14 51683602 51724383 - MGP_LPJ_P0039523 Cenpj protein_coding unknown_likely_coding MGP_LPJ_T0039520.1 MGP_LPJ_G0021298.1 mouse_genomes_project 14 51551647 51682128 + MGP_LPJ_P0039520 Rnf17 protein_coding protein_coding MGP_LPJ_T0039872.1 MGP_LPJ_G0021437.1 mouse_genomes_project 14 66096519 66174171 - MGP_LPJ_P0039872 Ppp3cc protein_coding protein_coding MGP_LPJ_T0039071.1 MGP_LPJ_G0021165.1 mouse_genomes_project 14 45277331 45280744 - MGP_LPJ_P0039071 Rnase9 protein_coding protein_coding MGP_LPJ_T0040238.1 MGP_LPJ_G0021571.1 mouse_genomes_project 14 120906859 120962753 + MGP_LPJ_P0040238 Tm9sf2 protein_coding protein_coding MGP_LPJ_T0040239.1 MGP_LPJ_G0021571.1 mouse_genomes_project 14 120906959 120937080 + MGP_LPJ_P0040239 Tm9sf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0040240.1 MGP_LPJ_G0021571.1 mouse_genomes_project 14 120907089 120959720 + MGP_LPJ_P0040240 Tm9sf2 protein_coding protein_coding MGP_LPJ_T0039854.1 MGP_LPJ_G0021433.1 mouse_genomes_project 14 66012312 66027981 - MGP_LPJ_P0039854 Ccar2 protein_coding protein_coding MGP_LPJ_T0017326.1 MGP_LPJ_G0015186.1 mouse_genomes_project 14 57023900 57110911 - Dleu2 processed_transcript lincRNA MGP_LPJ_T0017327.1 MGP_LPJ_G0015186.1 mouse_genomes_project 14 57024095 57110852 - Dleu2 processed_transcript lincRNA MGP_LPJ_T0017328.1 MGP_LPJ_G0015186.1 mouse_genomes_project 14 57024533 57110840 - Dleu2 processed_transcript lincRNA MGP_LPJ_T0017329.1 MGP_LPJ_G0015186.1 mouse_genomes_project 14 57024650 57074808 - Dleu2 processed_transcript lincRNA MGP_LPJ_T0017330.1 MGP_LPJ_G0015186.1 mouse_genomes_project 14 57024785 57074773 - Dleu2 processed_transcript lincRNA MGP_LPJ_T0017331.1 MGP_LPJ_G0015186.1 mouse_genomes_project 14 57042383 57043930 - Dleu2 processed_transcript TEC MGP_LPJ_T0017332.1 MGP_LPJ_G0015186.1 mouse_genomes_project 14 57043651 57110863 - Dleu2 processed_transcript lincRNA MGP_LPJ_T0017333.1 MGP_LPJ_G0015186.1 mouse_genomes_project 14 57049360 57074748 - Dleu2 processed_transcript lincRNA MGP_LPJ_T0017334.1 MGP_LPJ_G0015186.1 mouse_genomes_project 14 57051973 57055978 - Dleu2 processed_transcript TEC MGP_LPJ_T0017335.1 MGP_LPJ_G0015186.1 mouse_genomes_project 14 57052769 57110863 - Dleu2 processed_transcript lincRNA MGP_LPJ_T0017336.1 MGP_LPJ_G0015186.1 mouse_genomes_project 14 57056384 57074608 - Dleu2 processed_transcript lincRNA MGP_LPJ_T0017337.1 MGP_LPJ_G0015186.1 mouse_genomes_project 14 57056434 57074808 - Dleu2 processed_transcript lincRNA MGP_LPJ_T0017338.1 MGP_LPJ_G0015186.1 mouse_genomes_project 14 57059297 57110852 - Dleu2 processed_transcript lincRNA MGP_LPJ_T0017339.1 MGP_LPJ_G0015186.1 mouse_genomes_project 14 57068058 57110851 - Dleu2 processed_transcript lincRNA MGP_LPJ_T0017340.1 MGP_LPJ_G0015186.1 mouse_genomes_project 14 57068132 57110863 - Dleu2 processed_transcript lincRNA MGP_LPJ_T0101879.1 MGP_LPJ_G0039916.1 mouse_genomes_project 14 45584621 45585081 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002601.1 MGP_LPJ_G0002498.1 mouse_genomes_project 14 49107404 49107475 + TR_J_pseudogene TR_J_pseudogene MGP_LPJ_T0003592.1 MGP_LPJ_G0003262.1 mouse_genomes_project 14 71872298 71873884 - Gm4285 antisense antisense MGP_LPJ_T0039640.1 MGP_LPJ_G0021342.1 mouse_genomes_project 14 56366272 56443321 - MGP_LPJ_P0039640 Tnfrsf19 protein_coding protein_coding MGP_LPJ_T0039641.1 MGP_LPJ_G0021342.1 mouse_genomes_project 14 56366272 56451916 - MGP_LPJ_P0039641 Tnfrsf19 protein_coding protein_coding MGP_LPJ_T0006703.1 MGP_LPJ_G0005545.1 mouse_genomes_project 14 40809352 40812275 - Gm10101 lincRNA lincRNA MGP_LPJ_T0006704.1 MGP_LPJ_G0005545.1 mouse_genomes_project 14 40809357 40812275 - Gm10101 lincRNA lincRNA MGP_LPJ_T0002608.1 MGP_LPJ_G0002505.1 mouse_genomes_project 14 49169391 49169428 + TR_J_pseudogene TR_J_pseudogene MGP_LPJ_T0039228.1 MGP_LPJ_G0021207.1 mouse_genomes_project 14 47146251 47147363 - MGP_LPJ_P0039228 Olfr1507 protein_coding protein_coding MGP_LPJ_T0039229.1 MGP_LPJ_G0021207.1 mouse_genomes_project 14 47146251 47151965 - MGP_LPJ_P0039229 Olfr1507 protein_coding protein_coding MGP_LPJ_T0039230.1 MGP_LPJ_G0021207.1 mouse_genomes_project 14 47146794 47151567 - MGP_LPJ_P0039230 Olfr1507 protein_coding protein_coding MGP_LPJ_T0039231.1 MGP_LPJ_G0021207.1 mouse_genomes_project 14 47146806 47151961 - MGP_LPJ_P0039231 Olfr1507 protein_coding protein_coding MGP_LPJ_T0039232.1 MGP_LPJ_G0021207.1 mouse_genomes_project 14 47146815 47151595 - MGP_LPJ_P0039232 Olfr1507 protein_coding protein_coding MGP_LPJ_T0039233.1 MGP_LPJ_G0021207.1 mouse_genomes_project 14 47147211 47151959 - MGP_LPJ_P0039233 Olfr1507 protein_coding protein_coding MGP_LPJ_T0038936.1 MGP_LPJ_G0021116.1 mouse_genomes_project 14 41411283 41443842 - MGP_LPJ_P0038936 Dlgap5 protein_coding protein_coding MGP_LPJ_T0038937.1 MGP_LPJ_G0021116.1 mouse_genomes_project 14 41411292 41417758 - MGP_LPJ_P0038937 Dlgap5 protein_coding protein_coding MGP_LPJ_T0038938.1 MGP_LPJ_G0021116.1 mouse_genomes_project 14 41411520 41443687 - MGP_LPJ_P0038938 Dlgap5 protein_coding unknown_likely_coding MGP_LPJ_T0038939.1 MGP_LPJ_G0021116.1 mouse_genomes_project 14 41412222 41443612 - Dlgap5 protein_coding retained_intron MGP_LPJ_T0038940.1 MGP_LPJ_G0021116.1 mouse_genomes_project 14 41413342 41443642 - Dlgap5 protein_coding retained_intron MGP_LPJ_T0038941.1 MGP_LPJ_G0021116.1 mouse_genomes_project 14 41417353 41419466 - Dlgap5 protein_coding retained_intron MGP_LPJ_T0038942.1 MGP_LPJ_G0021116.1 mouse_genomes_project 14 41422001 41437256 - MGP_LPJ_P0038942 Dlgap5 protein_coding protein_coding MGP_LPJ_T0038943.1 MGP_LPJ_G0021116.1 mouse_genomes_project 14 41439025 41443635 - Dlgap5 protein_coding retained_intron MGP_LPJ_T0038944.1 MGP_LPJ_G0021116.1 mouse_genomes_project 14 41439557 41441942 - Dlgap5 protein_coding processed_transcript MGP_LPJ_T0038198.1 MGP_LPJ_G0020898.1 mouse_genomes_project 14 4652958 4675788 + MGP_LPJ_P0038198 3830406C13Rik protein_coding protein_coding MGP_LPJ_T0038199.1 MGP_LPJ_G0020898.1 mouse_genomes_project 14 4653011 4675792 + MGP_LPJ_P0038199 3830406C13Rik protein_coding unknown_likely_coding MGP_LPJ_T0100349.1 MGP_LPJ_G0038612.1 mouse_genomes_project 14 94321932 94322070 - Gm23276 snoRNA snoRNA MGP_LPJ_T0039696.1 MGP_LPJ_G0021368.1 mouse_genomes_project 14 58981882 59016647 + MGP_LPJ_P0039696 Fam167a protein_coding protein_coding MGP_LPJ_T0039697.1 MGP_LPJ_G0021368.1 mouse_genomes_project 14 58981897 58992069 + Fam167a protein_coding retained_intron MGP_LPJ_T0002693.1 MGP_LPJ_G0002575.1 mouse_genomes_project 14 48823920 48824691 + MGP_LPJ_P0002693 Trav21-dv12 TR_V_gene TR_V_gene MGP_LPJ_T0101887.1 MGP_LPJ_G0039924.1 mouse_genomes_project 14 56586994 56611130 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0039497.1 MGP_LPJ_G0021278.1 mouse_genomes_project 14 50915137 50924221 + MGP_LPJ_P0039497 Nfatc4 protein_coding protein_coding MGP_LPJ_T0039498.1 MGP_LPJ_G0021278.1 mouse_genomes_project 14 50915137 50924221 + MGP_LPJ_P0039498 Nfatc4 protein_coding protein_coding MGP_LPJ_T0039711.1 MGP_LPJ_G0021373.1 mouse_genomes_project 14 59531916 59538977 + MGP_LPJ_P0039711 Sox7 protein_coding protein_coding MGP_LPJ_T0040027.1 MGP_LPJ_G0021486.1 mouse_genomes_project 14 73157014 73222983 + MGP_LPJ_P0040027 Ccdc122 protein_coding protein_coding MGP_LPJ_T0040028.1 MGP_LPJ_G0021486.1 mouse_genomes_project 14 73157024 73222983 + MGP_LPJ_P0040028 Ccdc122 protein_coding protein_coding MGP_LPJ_T0040029.1 MGP_LPJ_G0021486.1 mouse_genomes_project 14 73157106 73222474 + MGP_LPJ_P0040029 Ccdc122 protein_coding nonsense_mediated_decay MGP_LPJ_T0040030.1 MGP_LPJ_G0021486.1 mouse_genomes_project 14 73221752 73223036 + Ccdc122 protein_coding processed_transcript MGP_LPJ_T0010012.1 MGP_LPJ_G0008130.1 mouse_genomes_project 14 58366155 58366265 + Mir6541 miRNA miRNA MGP_LPJ_T0038282.1 MGP_LPJ_G0020926.1 mouse_genomes_project 14 12739152 12752232 - MGP_LPJ_P0038282 2700060E02Rik protein_coding protein_coding MGP_LPJ_T0038352.1 MGP_LPJ_G0020953.1 mouse_genomes_project 14 14524795 14564073 + MGP_LPJ_P0038352 Kat6b protein_coding protein_coding MGP_LPJ_T0038353.1 MGP_LPJ_G0020953.1 mouse_genomes_project 14 14524820 14668567 + Kat6b protein_coding processed_transcript MGP_LPJ_T0038354.1 MGP_LPJ_G0020953.1 mouse_genomes_project 14 14545437 14719045 + MGP_LPJ_P0038354 Kat6b protein_coding protein_coding MGP_LPJ_T0038355.1 MGP_LPJ_G0020953.1 mouse_genomes_project 14 14545452 14719452 + MGP_LPJ_P0038355 Kat6b protein_coding protein_coding MGP_LPJ_T0038356.1 MGP_LPJ_G0020953.1 mouse_genomes_project 14 14545521 14565605 + Kat6b protein_coding retained_intron MGP_LPJ_T0038357.1 MGP_LPJ_G0020953.1 mouse_genomes_project 14 14545527 14719227 + MGP_LPJ_P0038357 Kat6b protein_coding unknown_likely_coding MGP_LPJ_T0038358.1 MGP_LPJ_G0020953.1 mouse_genomes_project 14 14545535 14719107 + MGP_LPJ_P0038358 Kat6b protein_coding protein_coding MGP_LPJ_T0038359.1 MGP_LPJ_G0020953.1 mouse_genomes_project 14 14546520 14667987 + Kat6b protein_coding retained_intron MGP_LPJ_T0038360.1 MGP_LPJ_G0020953.1 mouse_genomes_project 14 14546552 14567277 + Kat6b protein_coding retained_intron MGP_LPJ_T0038361.1 MGP_LPJ_G0020953.1 mouse_genomes_project 14 14546556 14667191 + Kat6b protein_coding retained_intron MGP_LPJ_T0038362.1 MGP_LPJ_G0020953.1 mouse_genomes_project 14 14546559 14719452 + MGP_LPJ_P0038362 Kat6b protein_coding protein_coding MGP_LPJ_T0038363.1 MGP_LPJ_G0020953.1 mouse_genomes_project 14 14563712 14718180 + MGP_LPJ_P0038363 Kat6b protein_coding protein_coding MGP_LPJ_T0038364.1 MGP_LPJ_G0020953.1 mouse_genomes_project 14 14668550 14672154 + Kat6b protein_coding retained_intron MGP_LPJ_T0038365.1 MGP_LPJ_G0020953.1 mouse_genomes_project 14 14669131 14681172 + Kat6b protein_coding retained_intron MGP_LPJ_T0040138.1 MGP_LPJ_G0021531.1 mouse_genomes_project 14 100388630 100408314 - MGP_LPJ_P0040138 Fbxl3 protein_coding protein_coding MGP_LPJ_T0040139.1 MGP_LPJ_G0021531.1 mouse_genomes_project 14 100389900 100407765 - MGP_LPJ_P0040139 Fbxl3 protein_coding protein_coding MGP_LPJ_T0040140.1 MGP_LPJ_G0021531.1 mouse_genomes_project 14 100390551 100407741 - MGP_LPJ_P0040140 Fbxl3 protein_coding protein_coding MGP_LPJ_T0040141.1 MGP_LPJ_G0021531.1 mouse_genomes_project 14 100391972 100398562 - Fbxl3 protein_coding retained_intron MGP_LPJ_T0040142.1 MGP_LPJ_G0021531.1 mouse_genomes_project 14 100398160 100408326 - MGP_LPJ_P0040142 Fbxl3 protein_coding protein_coding MGP_LPJ_T0040143.1 MGP_LPJ_G0021531.1 mouse_genomes_project 14 100398198 100404511 - MGP_LPJ_P0040143 Fbxl3 protein_coding protein_coding MGP_LPJ_T0038418.1 MGP_LPJ_G0020962.1 mouse_genomes_project 14 17297207 17309443 - MGP_LPJ_P0038418 Dlg5 protein_coding protein_coding MGP_LPJ_T0038419.1 MGP_LPJ_G0020962.1 mouse_genomes_project 14 17297207 17345574 - MGP_LPJ_P0038419 Dlg5 protein_coding protein_coding MGP_LPJ_T0038420.1 MGP_LPJ_G0020962.1 mouse_genomes_project 14 17297207 17418431 - MGP_LPJ_P0038420 Dlg5 protein_coding protein_coding MGP_LPJ_T0038421.1 MGP_LPJ_G0020962.1 mouse_genomes_project 14 17297209 17418431 - MGP_LPJ_P0038421 Dlg5 protein_coding protein_coding MGP_LPJ_T0038422.1 MGP_LPJ_G0020962.1 mouse_genomes_project 14 17307638 17315642 - MGP_LPJ_P0038422 Dlg5 protein_coding nonsense_mediated_decay MGP_LPJ_T0038423.1 MGP_LPJ_G0020962.1 mouse_genomes_project 14 17309535 17312019 - Dlg5 protein_coding retained_intron MGP_LPJ_T0038424.1 MGP_LPJ_G0020962.1 mouse_genomes_project 14 17319403 17323592 - Dlg5 protein_coding retained_intron MGP_LPJ_T0038425.1 MGP_LPJ_G0020962.1 mouse_genomes_project 14 17359327 17417376 - MGP_LPJ_P0038425 Dlg5 protein_coding protein_coding MGP_LPJ_T0039012.1 MGP_LPJ_G0021131.1 mouse_genomes_project 14 44236684 44237259 - MGP_LPJ_P0039012 protein_coding protein_coding MGP_LPJ_T0038973.1 MGP_LPJ_G0021120.1 mouse_genomes_project 14 42538035 42605862 + MGP_LPJ_P0038973 Tmem260 protein_coding protein_coding MGP_LPJ_T0038974.1 MGP_LPJ_G0021120.1 mouse_genomes_project 14 42538259 42594665 + Tmem260 protein_coding retained_intron MGP_LPJ_T0038975.1 MGP_LPJ_G0021120.1 mouse_genomes_project 14 42538289 42608207 + MGP_LPJ_P0038975 Tmem260 protein_coding protein_coding MGP_LPJ_T0038976.1 MGP_LPJ_G0021120.1 mouse_genomes_project 14 42538300 42605207 + MGP_LPJ_P0038976 Tmem260 protein_coding nonsense_mediated_decay MGP_LPJ_T0038977.1 MGP_LPJ_G0021120.1 mouse_genomes_project 14 42538305 42601444 + Tmem260 protein_coding retained_intron MGP_LPJ_T0098495.1 MGP_LPJ_G0036772.1 mouse_genomes_project 14 40954372 40958468 + Gm15562 sense_intronic sense_intronic MGP_LPJ_T0039870.1 MGP_LPJ_G0021436.1 mouse_genomes_project 14 66059155 66086207 - MGP_LPJ_P0039870 Sorbs3 protein_coding protein_coding MGP_LPJ_T0039871.1 MGP_LPJ_G0021436.1 mouse_genomes_project 14 66059857 66084465 - MGP_LPJ_P0039871 Sorbs3 protein_coding unknown_likely_coding MGP_LPJ_T0038731.1 MGP_LPJ_G0021036.1 mouse_genomes_project 14 25891044 25917991 + MGP_LPJ_P0038731 Ogdhl protein_coding unknown_likely_coding MGP_LPJ_T0038732.1 MGP_LPJ_G0021036.1 mouse_genomes_project 14 25891051 25917672 + MGP_LPJ_P0038732 Ogdhl protein_coding protein_coding MGP_LPJ_T0002555.1 MGP_LPJ_G0002454.1 mouse_genomes_project 14 49138807 49138864 + MGP_LPJ_P0002555 Traj33 TR_J_gene TR_J_gene MGP_LPJ_T0011382.1 MGP_LPJ_G0009500.1 mouse_genomes_project 14 14290557 14290793 + Gm26372 misc_RNA misc_RNA MGP_LPJ_T0039097.1 MGP_LPJ_G0021185.1 mouse_genomes_project 14 46501568 46509659 + MGP_LPJ_P0039097 Mettl17 protein_coding protein_coding MGP_LPJ_T0039098.1 MGP_LPJ_G0021185.1 mouse_genomes_project 14 46501602 46509651 + Mettl17 protein_coding retained_intron MGP_LPJ_T0039099.1 MGP_LPJ_G0021185.1 mouse_genomes_project 14 46501604 46507380 + MGP_LPJ_P0039099 Mettl17 protein_coding nonsense_mediated_decay MGP_LPJ_T0039100.1 MGP_LPJ_G0021185.1 mouse_genomes_project 14 46501615 46509584 + Mettl17 protein_coding retained_intron MGP_LPJ_T0039101.1 MGP_LPJ_G0021185.1 mouse_genomes_project 14 46501615 46509584 + MGP_LPJ_P0039101 Mettl17 protein_coding nonsense_mediated_decay MGP_LPJ_T0039102.1 MGP_LPJ_G0021185.1 mouse_genomes_project 14 46501615 46509584 + MGP_LPJ_P0039102 Mettl17 protein_coding nonsense_mediated_decay MGP_LPJ_T0039103.1 MGP_LPJ_G0021185.1 mouse_genomes_project 14 46501638 46507098 + Mettl17 protein_coding retained_intron MGP_LPJ_T0039104.1 MGP_LPJ_G0021185.1 mouse_genomes_project 14 46501644 46502385 + Mettl17 protein_coding retained_intron MGP_LPJ_T0039105.1 MGP_LPJ_G0021185.1 mouse_genomes_project 14 46501661 46510669 + Mettl17 protein_coding retained_intron MGP_LPJ_T0039106.1 MGP_LPJ_G0021185.1 mouse_genomes_project 14 46501664 46506694 + Mettl17 protein_coding retained_intron MGP_LPJ_T0039107.1 MGP_LPJ_G0021185.1 mouse_genomes_project 14 46501672 46509526 + MGP_LPJ_P0039107 Mettl17 protein_coding protein_coding MGP_LPJ_T0039108.1 MGP_LPJ_G0021185.1 mouse_genomes_project 14 46501672 46506694 + MGP_LPJ_P0039108 Mettl17 protein_coding protein_coding MGP_LPJ_T0039109.1 MGP_LPJ_G0021185.1 mouse_genomes_project 14 46501678 46503980 + Mettl17 protein_coding retained_intron MGP_LPJ_T0039110.1 MGP_LPJ_G0021185.1 mouse_genomes_project 14 46501680 46502389 + Mettl17 protein_coding retained_intron MGP_LPJ_T0039111.1 MGP_LPJ_G0021185.1 mouse_genomes_project 14 46502128 46508518 + MGP_LPJ_P0039111 Mettl17 protein_coding protein_coding MGP_LPJ_T0039112.1 MGP_LPJ_G0021185.1 mouse_genomes_project 14 46503886 46506809 + Mettl17 protein_coding retained_intron MGP_LPJ_T0040272.1 MGP_LPJ_G0021580.1 mouse_genomes_project 14 122115803 122473632 - MGP_LPJ_P0040272 Nalcn protein_coding protein_coding MGP_LPJ_T0038248.1 MGP_LPJ_G0020917.1 mouse_genomes_project 14 9120878 9267675 - MGP_LPJ_P0038248 Rarb protein_coding protein_coding MGP_LPJ_T0100341.1 MGP_LPJ_G0038604.1 mouse_genomes_project 14 86322471 86322603 + Gm25415 snoRNA snoRNA MGP_LPJ_T0006735.1 MGP_LPJ_G0005566.1 mouse_genomes_project 14 65582492 65599149 + 4930480K23Rik lincRNA lincRNA MGP_LPJ_T0006736.1 MGP_LPJ_G0005566.1 mouse_genomes_project 14 65582542 65612543 + 4930480K23Rik lincRNA lincRNA MGP_LPJ_T0039472.1 MGP_LPJ_G0021264.1 mouse_genomes_project 14 50737924 50740282 + MGP_LPJ_P0039472 Tssk4 protein_coding protein_coding MGP_LPJ_T0039473.1 MGP_LPJ_G0021264.1 mouse_genomes_project 14 50737926 50740282 + MGP_LPJ_P0039473 Tssk4 protein_coding protein_coding MGP_LPJ_T0002568.1 MGP_LPJ_G0002467.1 mouse_genomes_project 14 49157383 49157441 + MGP_LPJ_P0002568 Traj20 TR_J_gene TR_J_gene MGP_LPJ_T0038906.1 MGP_LPJ_G0021107.1 mouse_genomes_project 14 40757391 40773111 - MGP_LPJ_P0038906 Cnih1 protein_coding protein_coding MGP_LPJ_T0038803.1 MGP_LPJ_G0021070.1 mouse_genomes_project 14 28216226 28277898 - MGP_LPJ_P0038803 Ldb3 protein_coding protein_coding MGP_LPJ_T0038804.1 MGP_LPJ_G0021070.1 mouse_genomes_project 14 28216226 28277898 - MGP_LPJ_P0038804 Ldb3 protein_coding protein_coding MGP_LPJ_T0038805.1 MGP_LPJ_G0021070.1 mouse_genomes_project 14 28216226 28277824 - MGP_LPJ_P0038805 Ldb3 protein_coding protein_coding MGP_LPJ_T0038806.1 MGP_LPJ_G0021070.1 mouse_genomes_project 14 28216226 28277898 - MGP_LPJ_P0038806 Ldb3 protein_coding protein_coding MGP_LPJ_T0038807.1 MGP_LPJ_G0021070.1 mouse_genomes_project 14 28218993 28268911 - MGP_LPJ_P0038807 Ldb3 protein_coding unknown_likely_coding MGP_LPJ_T0038808.1 MGP_LPJ_G0021070.1 mouse_genomes_project 14 28250917 28277898 - MGP_LPJ_P0038808 Ldb3 protein_coding protein_coding MGP_LPJ_T0002544.1 MGP_LPJ_G0002443.1 mouse_genomes_project 14 49126334 49126397 + MGP_LPJ_P0002544 Traj45 TR_J_gene TR_J_gene MGP_LPJ_T0012976.1 MGP_LPJ_G0011067.1 mouse_genomes_project 14 19813652 19814198 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000947.1 MGP_LPJ_G0000875.1 mouse_genomes_project 14 50137709 50138748 - TEC TEC MGP_LPJ_T0003600.1 MGP_LPJ_G0003267.1 mouse_genomes_project 14 121777037 121781263 + Gm15735 antisense antisense MGP_LPJ_T0038742.1 MGP_LPJ_G0021043.1 mouse_genomes_project 14 26374179 26407236 + MGP_LPJ_P0038742 1810011H11Rik protein_coding protein_coding MGP_LPJ_T0099094.1 MGP_LPJ_G0037357.1 mouse_genomes_project 14 117214044 117214144 + Gm23302 snRNA snRNA MGP_LPJ_T0039477.1 MGP_LPJ_G0021267.1 mouse_genomes_project 14 50760656 50767628 + MGP_LPJ_P0039477 Gmpr2 protein_coding protein_coding MGP_LPJ_T0039029.1 MGP_LPJ_G0021145.1 mouse_genomes_project 14 44621513 44622443 + MGP_LPJ_P0039029 protein_coding protein_coding MGP_LPJ_T0039895.1 MGP_LPJ_G0021445.1 mouse_genomes_project 14 66443624 66447321 + MGP_LPJ_P0039895 Reep4 protein_coding protein_coding MGP_LPJ_T0006727.1 MGP_LPJ_G0005562.1 mouse_genomes_project 14 57949004 57953372 - lincRNA lincRNA MGP_LPJ_T0006728.1 MGP_LPJ_G0005562.1 mouse_genomes_project 14 57950425 57967349 - lincRNA lincRNA MGP_LPJ_T0002642.1 MGP_LPJ_G0002531.1 mouse_genomes_project 14 47568523 47687492 + MGP_LPJ_P0002642 TR_V_gene TR_V_gene MGP_LPJ_T0012984.1 MGP_LPJ_G0011075.1 mouse_genomes_project 14 39112821 39113731 + processed_pseudogene processed_pseudogene MGP_LPJ_T0039979.1 MGP_LPJ_G0021470.1 mouse_genomes_project 14 71100725 71173165 + MGP_LPJ_P0039979 Lcp1 protein_coding protein_coding MGP_LPJ_T0039980.1 MGP_LPJ_G0021470.1 mouse_genomes_project 14 71100783 71117733 + Lcp1 protein_coding processed_transcript MGP_LPJ_T0039981.1 MGP_LPJ_G0021470.1 mouse_genomes_project 14 71100783 71175605 + MGP_LPJ_P0039981 Lcp1 protein_coding protein_coding MGP_LPJ_T0039982.1 MGP_LPJ_G0021470.1 mouse_genomes_project 14 71101123 71175554 + MGP_LPJ_P0039982 Lcp1 protein_coding protein_coding MGP_LPJ_T0039983.1 MGP_LPJ_G0021470.1 mouse_genomes_project 14 71101178 71205617 + MGP_LPJ_P0039983 Lcp1 protein_coding protein_coding MGP_LPJ_T0039984.1 MGP_LPJ_G0021470.1 mouse_genomes_project 14 71105952 71206663 + MGP_LPJ_P0039984 Lcp1 protein_coding protein_coding MGP_LPJ_T0039985.1 MGP_LPJ_G0021470.1 mouse_genomes_project 14 71106095 71175545 + MGP_LPJ_P0039985 Lcp1 protein_coding protein_coding MGP_LPJ_T0039986.1 MGP_LPJ_G0021470.1 mouse_genomes_project 14 71148595 71151672 + Lcp1 protein_coding retained_intron MGP_LPJ_T0039987.1 MGP_LPJ_G0021470.1 mouse_genomes_project 14 71149856 71171795 + Lcp1 protein_coding processed_transcript MGP_LPJ_T0039988.1 MGP_LPJ_G0021470.1 mouse_genomes_project 14 71163987 71206637 + MGP_LPJ_P0039988 Lcp1 protein_coding protein_coding MGP_LPJ_T0039989.1 MGP_LPJ_G0021470.1 mouse_genomes_project 14 71171552 71173087 + Lcp1 protein_coding processed_transcript MGP_LPJ_T0002659.1 MGP_LPJ_G0002548.1 mouse_genomes_project 14 48259221 48259707 + MGP_LPJ_P0002659 Trav8d-1 TR_V_gene TR_V_gene MGP_LPJ_T0100316.1 MGP_LPJ_G0038579.1 mouse_genomes_project 14 27777026 27777115 + Gm24998 snoRNA snoRNA MGP_LPJ_T0039582.1 MGP_LPJ_G0021322.1 mouse_genomes_project 14 53334141 53381174 + MGP_LPJ_P0039582 Fgf9 protein_coding protein_coding MGP_LPJ_T0039583.1 MGP_LPJ_G0021322.1 mouse_genomes_project 14 53337276 53375998 + MGP_LPJ_P0039583 Fgf9 protein_coding protein_coding MGP_LPJ_T0039584.1 MGP_LPJ_G0021322.1 mouse_genomes_project 14 53339705 53375998 + MGP_LPJ_P0039584 Fgf9 protein_coding protein_coding MGP_LPJ_T0039585.1 MGP_LPJ_G0021322.1 mouse_genomes_project 14 53341096 53375216 + MGP_LPJ_P0039585 Fgf9 protein_coding protein_coding MGP_LPJ_T0013013.1 MGP_LPJ_G0011104.1 mouse_genomes_project 14 55532405 55532610 + processed_pseudogene processed_pseudogene MGP_LPJ_T0040031.1 MGP_LPJ_G0021487.1 mouse_genomes_project 14 73261130 73855073 + MGP_LPJ_P0040031 Enox1 protein_coding protein_coding MGP_LPJ_T0012963.1 MGP_LPJ_G0011054.1 mouse_genomes_project 14 10760950 10761828 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003579.1 MGP_LPJ_G0003251.1 mouse_genomes_project 14 52740519 52744611 - Ift88os antisense antisense MGP_LPJ_T0006684.1 MGP_LPJ_G0005532.1 mouse_genomes_project 14 19585091 19613990 + 4933413J09Rik lincRNA lincRNA MGP_LPJ_T0006685.1 MGP_LPJ_G0005532.1 mouse_genomes_project 14 19586064 19635748 + 4933413J09Rik lincRNA lincRNA MGP_LPJ_T0006686.1 MGP_LPJ_G0005532.1 mouse_genomes_project 14 19586097 19605077 + 4933413J09Rik lincRNA lincRNA MGP_LPJ_T0006687.1 MGP_LPJ_G0005532.1 mouse_genomes_project 14 19591148 19606195 + 4933413J09Rik lincRNA lincRNA MGP_LPJ_T0006688.1 MGP_LPJ_G0005532.1 mouse_genomes_project 14 19592905 19606093 + 4933413J09Rik lincRNA lincRNA MGP_LPJ_T0006689.1 MGP_LPJ_G0005532.1 mouse_genomes_project 14 19592905 19631934 + 4933413J09Rik lincRNA lincRNA MGP_LPJ_T0039809.1 MGP_LPJ_G0021409.1 mouse_genomes_project 14 62777364 62841384 - MGP_LPJ_P0039809 Ppp2r2a protein_coding protein_coding MGP_LPJ_T0039713.1 MGP_LPJ_G0021375.1 mouse_genomes_project 14 59581979 59630957 + MGP_LPJ_P0039713 Rp1l1 protein_coding protein_coding MGP_LPJ_T0002653.1 MGP_LPJ_G0002542.1 mouse_genomes_project 14 48123335 48124480 + MGP_LPJ_P0002653 Trav8n-2 TR_V_gene TR_V_gene MGP_LPJ_T0040180.1 MGP_LPJ_G0021545.1 mouse_genomes_project 14 109985584 109993583 + MGP_LPJ_P0040180 Slitrk5 protein_coding protein_coding MGP_LPJ_T0039689.1 MGP_LPJ_G0021365.1 mouse_genomes_project 14 58706080 58716553 - MGP_LPJ_P0039689 Neil2 protein_coding unknown_likely_coding MGP_LPJ_T0010024.1 MGP_LPJ_G0008142.1 mouse_genomes_project 14 75978412 75978510 + Mir759 miRNA miRNA MGP_LPJ_T0039219.1 MGP_LPJ_G0021204.1 mouse_genomes_project 14 47025442 47028856 - MGP_LPJ_P0039219 Olfr1511 protein_coding protein_coding MGP_LPJ_T0002556.1 MGP_LPJ_G0002455.1 mouse_genomes_project 14 49139525 49139591 + MGP_LPJ_P0002556 Traj32 TR_J_gene TR_J_gene MGP_LPJ_T0002577.1 MGP_LPJ_G0002476.1 mouse_genomes_project 14 49168867 49168925 + MGP_LPJ_P0002577 Traj9 TR_J_gene TR_J_gene MGP_LPJ_T0040100.1 MGP_LPJ_G0021521.1 mouse_genomes_project 14 97010875 97305956 - MGP_LPJ_P0040100 Klf12 protein_coding protein_coding MGP_LPJ_T0100339.1 MGP_LPJ_G0038602.1 mouse_genomes_project 14 79734947 79735081 + Gm24774 snoRNA snoRNA MGP_LPJ_T0100354.1 MGP_LPJ_G0038617.1 mouse_genomes_project 14 99614008 99614139 - Gm22347 snoRNA snoRNA MGP_LPJ_T0003568.1 MGP_LPJ_G0003243.1 mouse_genomes_project 14 49620058 49624178 + 4930579G18Rik antisense antisense MGP_LPJ_T0011384.1 MGP_LPJ_G0009502.1 mouse_genomes_project 14 25360706 25361004 - Gm22876 misc_RNA misc_RNA MGP_LPJ_T0038922.1 MGP_LPJ_G0021111.1 mouse_genomes_project 14 41161596 41198810 - MGP_LPJ_P0038922 Gch1 protein_coding protein_coding MGP_LPJ_T0003534.1 MGP_LPJ_G0003218.1 mouse_genomes_project 14 6451009 6486040 + Gm11100 antisense antisense MGP_LPJ_T0003535.1 MGP_LPJ_G0003218.1 mouse_genomes_project 14 6467818 6486040 + Gm11100 antisense antisense MGP_LPJ_T0039695.1 MGP_LPJ_G0021367.1 mouse_genomes_project 14 58912713 58960600 - MGP_LPJ_P0039695 Blk protein_coding protein_coding MGP_LPJ_T0038854.1 MGP_LPJ_G0021087.1 mouse_genomes_project 14 34919087 34932322 - MGP_LPJ_P0038854 Dydc2 protein_coding protein_coding MGP_LPJ_T0002660.1 MGP_LPJ_G0002549.1 mouse_genomes_project 14 48295171 48295731 + MGP_LPJ_P0002660 TR_V_gene TR_V_gene MGP_LPJ_T0100324.1 MGP_LPJ_G0038587.1 mouse_genomes_project 14 51385843 51385969 + Gm24118 snoRNA snoRNA MGP_LPJ_T0040235.1 MGP_LPJ_G0021568.1 mouse_genomes_project 14 120706208 120710547 - MGP_LPJ_P0040235 Gpr18 protein_coding protein_coding MGP_LPJ_T0039118.1 MGP_LPJ_G0021188.1 mouse_genomes_project 14 46541411 46544261 + MGP_LPJ_P0039118 Tppp2 protein_coding protein_coding MGP_LPJ_T0039119.1 MGP_LPJ_G0021188.1 mouse_genomes_project 14 46542330 46544261 + MGP_LPJ_P0039119 Tppp2 protein_coding protein_coding MGP_LPJ_T0038784.1 MGP_LPJ_G0021060.1 mouse_genomes_project 14 27818285 27826761 - MGP_LPJ_P0038784 Npy4r protein_coding protein_coding MGP_LPJ_T0002667.1 MGP_LPJ_G0002555.1 mouse_genomes_project 14 48416516 48417132 + MGP_LPJ_P0002667 TR_V_gene TR_V_gene MGP_LPJ_T0002668.1 MGP_LPJ_G0002555.1 mouse_genomes_project 14 48416560 48417132 + MGP_LPJ_P0002668 TR_V_gene TR_V_gene MGP_LPJ_T0038334.1 MGP_LPJ_G0020947.1 mouse_genomes_project 14 13718179 13728761 - MGP_LPJ_P0038334 Ndst2 protein_coding unknown_likely_coding MGP_LPJ_T0002547.1 MGP_LPJ_G0002446.1 mouse_genomes_project 14 49129221 49129285 + MGP_LPJ_P0002547 Traj42 TR_J_gene TR_J_gene MGP_LPJ_T0040234.1 MGP_LPJ_G0021567.1 mouse_genomes_project 14 120671844 120816048 + MGP_LPJ_P0040234 Ubac2 protein_coding protein_coding MGP_LPJ_T0039746.1 MGP_LPJ_G0021390.1 mouse_genomes_project 14 61324417 61433623 + MGP_LPJ_P0039746 Scara5 protein_coding protein_coding MGP_LPJ_T0039747.1 MGP_LPJ_G0021390.1 mouse_genomes_project 14 61324451 61412568 + MGP_LPJ_P0039747 Scara5 protein_coding protein_coding MGP_LPJ_T0039748.1 MGP_LPJ_G0021390.1 mouse_genomes_project 14 61337135 61412416 + Scara5 protein_coding processed_transcript MGP_LPJ_T0012961.1 MGP_LPJ_G0011052.1 mouse_genomes_project 14 5283709 5284045 + processed_pseudogene processed_pseudogene MGP_LPJ_T0039672.1 MGP_LPJ_G0021356.1 mouse_genomes_project 14 58174341 58259560 - MGP_LPJ_P0039672 Ints6 protein_coding protein_coding MGP_LPJ_T0039673.1 MGP_LPJ_G0021356.1 mouse_genomes_project 14 58192622 58259106 - MGP_LPJ_P0039673 Ints6 protein_coding unknown_likely_coding MGP_LPJ_T0039796.1 MGP_LPJ_G0021405.1 mouse_genomes_project 14 62543921 62610036 - MGP_LPJ_P0039796 Dpysl2 protein_coding protein_coding MGP_LPJ_T0040221.1 MGP_LPJ_G0021561.1 mouse_genomes_project 14 119185051 119218161 + MGP_LPJ_P0040221 Rap2a protein_coding protein_coding MGP_LPJ_T0040222.1 MGP_LPJ_G0021561.1 mouse_genomes_project 14 119214567 119218161 + MGP_LPJ_P0040222 Rap2a protein_coding protein_coding MGP_LPJ_T0039690.1 MGP_LPJ_G0021366.1 mouse_genomes_project 14 58721657 58770955 - MGP_LPJ_P0039690 Gata4 protein_coding protein_coding MGP_LPJ_T0039691.1 MGP_LPJ_G0021366.1 mouse_genomes_project 14 58723110 58766833 - MGP_LPJ_P0039691 Gata4 protein_coding protein_coding MGP_LPJ_T0039692.1 MGP_LPJ_G0021366.1 mouse_genomes_project 14 58766786 58797294 - MGP_LPJ_P0039692 Gata4 protein_coding protein_coding MGP_LPJ_T0039693.1 MGP_LPJ_G0021366.1 mouse_genomes_project 14 58766799 58796714 - MGP_LPJ_P0039693 Gata4 protein_coding protein_coding MGP_LPJ_T0039694.1 MGP_LPJ_G0021366.1 mouse_genomes_project 14 58766799 58796714 - MGP_LPJ_P0039694 Gata4 protein_coding protein_coding MGP_LPJ_T0100308.1 MGP_LPJ_G0038571.1 mouse_genomes_project 14 13162799 13162916 - Gm24912 snoRNA snoRNA MGP_LPJ_T0039215.1 MGP_LPJ_G0021201.1 mouse_genomes_project 14 46947823 46952978 - Sall2 protein_coding processed_transcript MGP_LPJ_T0039216.1 MGP_LPJ_G0021201.1 mouse_genomes_project 14 46947823 46967369 - MGP_LPJ_P0039216 Sall2 protein_coding protein_coding MGP_LPJ_T0038433.1 MGP_LPJ_G0020965.1 mouse_genomes_project 14 17713154 17717906 + MGP_LPJ_P0038433 Rps24 protein_coding protein_coding MGP_LPJ_T0038434.1 MGP_LPJ_G0020965.1 mouse_genomes_project 14 17713154 17718620 + MGP_LPJ_P0038434 Rps24 protein_coding protein_coding MGP_LPJ_T0012960.1 MGP_LPJ_G0011051.1 mouse_genomes_project 14 3482455 3483279 + processed_pseudogene processed_pseudogene MGP_LPJ_T0038308.1 MGP_LPJ_G0020937.1 mouse_genomes_project 14 13436337 13462451 - MGP_LPJ_P0038308 Anxa7 protein_coding protein_coding MGP_LPJ_T0038309.1 MGP_LPJ_G0020937.1 mouse_genomes_project 14 13436337 13462451 - MGP_LPJ_P0038309 Anxa7 protein_coding protein_coding MGP_LPJ_T0038310.1 MGP_LPJ_G0020937.1 mouse_genomes_project 14 13436354 13462288 - MGP_LPJ_P0038310 Anxa7 protein_coding unknown_likely_coding MGP_LPJ_T0101873.1 MGP_LPJ_G0039910.1 mouse_genomes_project 14 41558433 41560170 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0039372.1 MGP_LPJ_G0021248.1 mouse_genomes_project 14 50546901 50558961 + MGP_LPJ_P0039372 Dhrs4 protein_coding protein_coding MGP_LPJ_T0009990.1 MGP_LPJ_G0008108.1 mouse_genomes_project 14 17249186 17249240 + Mir7210 miRNA miRNA MGP_LPJ_T0003546.1 MGP_LPJ_G0003223.1 mouse_genomes_project 14 16149740 16218865 - Gm10248 antisense antisense MGP_LPJ_T0011388.1 MGP_LPJ_G0009506.1 mouse_genomes_project 14 39375193 39375476 - Gm22637 misc_RNA misc_RNA MGP_LPJ_T0038212.1 MGP_LPJ_G0020904.1 mouse_genomes_project 14 6485320 6499781 - MGP_LPJ_P0038212 Thoc7 protein_coding protein_coding MGP_LPJ_T0040245.1 MGP_LPJ_G0021575.1 mouse_genomes_project 14 121302870 121307288 + MGP_LPJ_P0040245 Zic2 protein_coding protein_coding MGP_LPJ_T0040246.1 MGP_LPJ_G0021575.1 mouse_genomes_project 14 121305535 121306486 + Zic2 protein_coding retained_intron MGP_LPJ_T0038696.1 MGP_LPJ_G0021030.1 mouse_genomes_project 14 25635094 25641272 + MGP_LPJ_P0038696 Oxnad1 protein_coding protein_coding MGP_LPJ_T0038697.1 MGP_LPJ_G0021030.1 mouse_genomes_project 14 25635096 25646140 + MGP_LPJ_P0038697 Oxnad1 protein_coding protein_coding MGP_LPJ_T0038698.1 MGP_LPJ_G0021030.1 mouse_genomes_project 14 25635133 25652791 + MGP_LPJ_P0038698 Oxnad1 protein_coding protein_coding MGP_LPJ_T0038699.1 MGP_LPJ_G0021030.1 mouse_genomes_project 14 25635507 25649227 + MGP_LPJ_P0038699 Oxnad1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038700.1 MGP_LPJ_G0021030.1 mouse_genomes_project 14 25635531 25652791 + MGP_LPJ_P0038700 Oxnad1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038701.1 MGP_LPJ_G0021030.1 mouse_genomes_project 14 25635546 25649096 + MGP_LPJ_P0038701 Oxnad1 protein_coding protein_coding MGP_LPJ_T0038702.1 MGP_LPJ_G0021030.1 mouse_genomes_project 14 25635554 25649638 + Oxnad1 protein_coding retained_intron MGP_LPJ_T0038703.1 MGP_LPJ_G0021030.1 mouse_genomes_project 14 25635554 25646220 + MGP_LPJ_P0038703 Oxnad1 protein_coding protein_coding MGP_LPJ_T0038704.1 MGP_LPJ_G0021030.1 mouse_genomes_project 14 25635597 25646180 + MGP_LPJ_P0038704 Oxnad1 protein_coding protein_coding MGP_LPJ_T0038705.1 MGP_LPJ_G0021030.1 mouse_genomes_project 14 25644994 25652244 + MGP_LPJ_P0038705 Oxnad1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038706.1 MGP_LPJ_G0021030.1 mouse_genomes_project 14 25645057 25652441 + MGP_LPJ_P0038706 Oxnad1 protein_coding protein_coding MGP_LPJ_T0038707.1 MGP_LPJ_G0021030.1 mouse_genomes_project 14 25650413 25651871 + Oxnad1 protein_coding retained_intron MGP_LPJ_T0040080.1 MGP_LPJ_G0021511.1 mouse_genomes_project 14 85010492 85017191 - MGP_LPJ_P0040080 Pcdh20 protein_coding protein_coding MGP_LPJ_T0040081.1 MGP_LPJ_G0021511.1 mouse_genomes_project 14 85012606 85017141 - MGP_LPJ_P0040081 Pcdh20 protein_coding protein_coding MGP_LPJ_T0006750.1 MGP_LPJ_G0005578.1 mouse_genomes_project 14 116977273 117010531 + 1700044C05Rik lincRNA lincRNA MGP_LPJ_T0039839.1 MGP_LPJ_G0021423.1 mouse_genomes_project 14 65087790 65095546 - MGP_LPJ_P0039839 Slc25a37 protein_coding protein_coding MGP_LPJ_T0039840.1 MGP_LPJ_G0021423.1 mouse_genomes_project 14 65090114 65095546 - MGP_LPJ_P0039840 Slc25a37 protein_coding nonsense_mediated_decay MGP_LPJ_T0039386.1 MGP_LPJ_G0021254.1 mouse_genomes_project 14 50639552 50649612 + MGP_LPJ_P0039386 Dcaf11 protein_coding protein_coding MGP_LPJ_T0039387.1 MGP_LPJ_G0021254.1 mouse_genomes_project 14 50639564 50640988 + MGP_LPJ_P0039387 Dcaf11 protein_coding protein_coding MGP_LPJ_T0039388.1 MGP_LPJ_G0021254.1 mouse_genomes_project 14 50639567 50640303 + Dcaf11 protein_coding processed_transcript MGP_LPJ_T0039389.1 MGP_LPJ_G0021254.1 mouse_genomes_project 14 50639571 50642480 + MGP_LPJ_P0039389 Dcaf11 protein_coding protein_coding MGP_LPJ_T0039390.1 MGP_LPJ_G0021254.1 mouse_genomes_project 14 50639608 50649611 + MGP_LPJ_P0039390 Dcaf11 protein_coding nonsense_mediated_decay MGP_LPJ_T0039391.1 MGP_LPJ_G0021254.1 mouse_genomes_project 14 50639667 50649082 + Dcaf11 protein_coding retained_intron MGP_LPJ_T0039392.1 MGP_LPJ_G0021254.1 mouse_genomes_project 14 50640028 50640646 + Dcaf11 protein_coding processed_transcript MGP_LPJ_T0039393.1 MGP_LPJ_G0021254.1 mouse_genomes_project 14 50640058 50649478 + MGP_LPJ_P0039393 Dcaf11 protein_coding protein_coding MGP_LPJ_T0039394.1 MGP_LPJ_G0021254.1 mouse_genomes_project 14 50640064 50640990 + MGP_LPJ_P0039394 Dcaf11 protein_coding protein_coding MGP_LPJ_T0039395.1 MGP_LPJ_G0021254.1 mouse_genomes_project 14 50640079 50643950 + MGP_LPJ_P0039395 Dcaf11 protein_coding protein_coding MGP_LPJ_T0039396.1 MGP_LPJ_G0021254.1 mouse_genomes_project 14 50640080 50649608 + MGP_LPJ_P0039396 Dcaf11 protein_coding nonsense_mediated_decay MGP_LPJ_T0039397.1 MGP_LPJ_G0021254.1 mouse_genomes_project 14 50640475 50649609 + MGP_LPJ_P0039397 Dcaf11 protein_coding protein_coding MGP_LPJ_T0039398.1 MGP_LPJ_G0021254.1 mouse_genomes_project 14 50640517 50643327 + MGP_LPJ_P0039398 Dcaf11 protein_coding protein_coding MGP_LPJ_T0039399.1 MGP_LPJ_G0021254.1 mouse_genomes_project 14 50640530 50649611 + Dcaf11 protein_coding retained_intron MGP_LPJ_T0039400.1 MGP_LPJ_G0021254.1 mouse_genomes_project 14 50640613 50649478 + MGP_LPJ_P0039400 Dcaf11 protein_coding nonsense_mediated_decay MGP_LPJ_T0039401.1 MGP_LPJ_G0021254.1 mouse_genomes_project 14 50640613 50649478 + MGP_LPJ_P0039401 Dcaf11 protein_coding protein_coding MGP_LPJ_T0039402.1 MGP_LPJ_G0021254.1 mouse_genomes_project 14 50643937 50644390 + Dcaf11 protein_coding retained_intron MGP_LPJ_T0039403.1 MGP_LPJ_G0021254.1 mouse_genomes_project 14 50645408 50648936 + Dcaf11 protein_coding processed_transcript MGP_LPJ_T0002536.1 MGP_LPJ_G0002437.1 mouse_genomes_project 14 49118731 49118797 + MGP_LPJ_P0002536 Traj52 TR_J_gene TR_J_gene MGP_LPJ_T0039841.1 MGP_LPJ_G0021424.1 mouse_genomes_project 14 65510889 65539024 + MGP_LPJ_P0039841 protein_coding unknown_likely_coding MGP_LPJ_T0038223.1 MGP_LPJ_G0020909.1 mouse_genomes_project 14 6897939 6907005 + MGP_LPJ_P0038223 Il3ra protein_coding unknown_likely_coding MGP_LPJ_T0012962.1 MGP_LPJ_G0011053.1 mouse_genomes_project 14 5836387 5836519 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002650.1 MGP_LPJ_G0002539.1 mouse_genomes_project 14 47846472 47846942 + MGP_LPJ_P0002650 TR_V_gene TR_V_gene MGP_LPJ_T0040201.1 MGP_LPJ_G0021556.1 mouse_genomes_project 14 117592901 117636394 + MGP_LPJ_P0040201 Dnajc3 protein_coding protein_coding MGP_LPJ_T0002628.1 MGP_LPJ_G0002520.1 mouse_genomes_project 14 47363398 47369411 + MGP_LPJ_P0002628 TR_V_gene TR_V_gene MGP_LPJ_T0038618.1 MGP_LPJ_G0021014.1 mouse_genomes_project 14 24671727 24692341 - MGP_LPJ_P0038618 Nisch protein_coding protein_coding MGP_LPJ_T0038619.1 MGP_LPJ_G0021014.1 mouse_genomes_project 14 24671727 24707617 - MGP_LPJ_P0038619 Nisch protein_coding protein_coding MGP_LPJ_T0038620.1 MGP_LPJ_G0021014.1 mouse_genomes_project 14 24672055 24688019 - MGP_LPJ_P0038620 Nisch protein_coding protein_coding MGP_LPJ_T0038621.1 MGP_LPJ_G0021014.1 mouse_genomes_project 14 24672163 24675080 - MGP_LPJ_P0038621 Nisch protein_coding protein_coding MGP_LPJ_T0038622.1 MGP_LPJ_G0021014.1 mouse_genomes_project 14 24672811 24674526 - MGP_LPJ_P0038622 Nisch protein_coding protein_coding MGP_LPJ_T0038623.1 MGP_LPJ_G0021014.1 mouse_genomes_project 14 24675224 24677389 - MGP_LPJ_P0038623 Nisch protein_coding protein_coding MGP_LPJ_T0038624.1 MGP_LPJ_G0021014.1 mouse_genomes_project 14 24677696 24704203 - MGP_LPJ_P0038624 Nisch protein_coding protein_coding MGP_LPJ_T0038625.1 MGP_LPJ_G0021014.1 mouse_genomes_project 14 24678006 24682274 - MGP_LPJ_P0038625 Nisch protein_coding protein_coding MGP_LPJ_T0038626.1 MGP_LPJ_G0021014.1 mouse_genomes_project 14 24678192 24686122 - MGP_LPJ_P0038626 Nisch protein_coding nonsense_mediated_decay MGP_LPJ_T0038627.1 MGP_LPJ_G0021014.1 mouse_genomes_project 14 24678301 24693431 - Nisch protein_coding processed_transcript MGP_LPJ_T0038628.1 MGP_LPJ_G0021014.1 mouse_genomes_project 14 24678499 24686442 - Nisch protein_coding processed_transcript MGP_LPJ_T0038629.1 MGP_LPJ_G0021014.1 mouse_genomes_project 14 24681653 24683633 - Nisch protein_coding processed_transcript MGP_LPJ_T0038630.1 MGP_LPJ_G0021014.1 mouse_genomes_project 14 24684116 24707642 - MGP_LPJ_P0038630 Nisch protein_coding protein_coding MGP_LPJ_T0038631.1 MGP_LPJ_G0021014.1 mouse_genomes_project 14 24684316 24685749 - Nisch protein_coding processed_transcript MGP_LPJ_T0038632.1 MGP_LPJ_G0021014.1 mouse_genomes_project 14 24685810 24692308 - MGP_LPJ_P0038632 Nisch protein_coding protein_coding MGP_LPJ_T0038633.1 MGP_LPJ_G0021014.1 mouse_genomes_project 14 24686489 24707516 - MGP_LPJ_P0038633 Nisch protein_coding protein_coding MGP_LPJ_T0038634.1 MGP_LPJ_G0021014.1 mouse_genomes_project 14 24686525 24707516 - MGP_LPJ_P0038634 Nisch protein_coding nonsense_mediated_decay MGP_LPJ_T0038635.1 MGP_LPJ_G0021014.1 mouse_genomes_project 14 24687175 24688264 - Nisch protein_coding processed_transcript MGP_LPJ_T0038636.1 MGP_LPJ_G0021014.1 mouse_genomes_project 14 24687924 24704124 - MGP_LPJ_P0038636 Nisch protein_coding nonsense_mediated_decay MGP_LPJ_T0038637.1 MGP_LPJ_G0021014.1 mouse_genomes_project 14 24689150 24691900 - Nisch protein_coding retained_intron MGP_LPJ_T0038638.1 MGP_LPJ_G0021014.1 mouse_genomes_project 14 24701756 24707516 - Nisch protein_coding processed_transcript MGP_LPJ_T0038639.1 MGP_LPJ_G0021014.1 mouse_genomes_project 14 24702677 24707517 - MGP_LPJ_P0038639 Nisch protein_coding protein_coding MGP_LPJ_T0038640.1 MGP_LPJ_G0021014.1 mouse_genomes_project 14 24704118 24717767 - Nisch protein_coding processed_transcript MGP_LPJ_T0010026.1 MGP_LPJ_G0008144.1 mouse_genomes_project 14 97861998 97862109 + Gm22401 miRNA miRNA MGP_LPJ_T0039586.1 MGP_LPJ_G0021323.1 mouse_genomes_project 14 54432928 54443831 - MGP_LPJ_P0039586 1700129C05Rik protein_coding protein_coding MGP_LPJ_T0039587.1 MGP_LPJ_G0021323.1 mouse_genomes_project 14 54433127 54443831 - MGP_LPJ_P0039587 1700129C05Rik protein_coding protein_coding MGP_LPJ_T0039588.1 MGP_LPJ_G0021323.1 mouse_genomes_project 14 54433130 54443831 - MGP_LPJ_P0039588 1700129C05Rik protein_coding protein_coding MGP_LPJ_T0039589.1 MGP_LPJ_G0021323.1 mouse_genomes_project 14 54442263 54443831 - MGP_LPJ_P0039589 1700129C05Rik protein_coding protein_coding MGP_LPJ_T0038501.1 MGP_LPJ_G0020987.1 mouse_genomes_project 14 20958470 21827016 + MGP_LPJ_P0038501 Erc2 protein_coding protein_coding MGP_LPJ_T0038502.1 MGP_LPJ_G0020987.1 mouse_genomes_project 14 20987668 21662359 + MGP_LPJ_P0038502 Erc2 protein_coding unknown_likely_coding MGP_LPJ_T0039802.1 MGP_LPJ_G0021408.1 mouse_genomes_project 14 62745925 62772153 - MGP_LPJ_P0039802 Bnip3l protein_coding protein_coding MGP_LPJ_T0039803.1 MGP_LPJ_G0021408.1 mouse_genomes_project 14 62745925 62772174 - MGP_LPJ_P0039803 Bnip3l protein_coding protein_coding MGP_LPJ_T0039804.1 MGP_LPJ_G0021408.1 mouse_genomes_project 14 62745935 62771676 - MGP_LPJ_P0039804 Bnip3l protein_coding unknown_likely_coding MGP_LPJ_T0039805.1 MGP_LPJ_G0021408.1 mouse_genomes_project 14 62752216 62762872 - Bnip3l protein_coding processed_transcript MGP_LPJ_T0039806.1 MGP_LPJ_G0021408.1 mouse_genomes_project 14 62752395 62763475 - Bnip3l protein_coding processed_transcript MGP_LPJ_T0039807.1 MGP_LPJ_G0021408.1 mouse_genomes_project 14 62752404 62762695 - Bnip3l protein_coding processed_transcript MGP_LPJ_T0039808.1 MGP_LPJ_G0021408.1 mouse_genomes_project 14 62756518 62762627 - Bnip3l protein_coding retained_intron MGP_LPJ_T0038998.1 MGP_LPJ_G0021125.1 mouse_genomes_project 14 43382281 43405024 - MGP_LPJ_P0038998 1700011H14Rik protein_coding unknown_likely_coding MGP_LPJ_T0038999.1 MGP_LPJ_G0021125.1 mouse_genomes_project 14 43386145 43405195 - MGP_LPJ_P0038999 1700011H14Rik protein_coding protein_coding MGP_LPJ_T0039000.1 MGP_LPJ_G0021125.1 mouse_genomes_project 14 43386379 43405164 - MGP_LPJ_P0039000 1700011H14Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0039001.1 MGP_LPJ_G0021125.1 mouse_genomes_project 14 43392595 43405164 - MGP_LPJ_P0039001 1700011H14Rik protein_coding protein_coding MGP_LPJ_T0000951.1 MGP_LPJ_G0000879.1 mouse_genomes_project 14 60452232 60455637 - TEC TEC MGP_LPJ_T0039095.1 MGP_LPJ_G0021184.1 mouse_genomes_project 14 46448383 46449251 + MGP_LPJ_P0039095 Ear6 protein_coding protein_coding MGP_LPJ_T0039096.1 MGP_LPJ_G0021184.1 mouse_genomes_project 14 46448452 46449251 + MGP_LPJ_P0039096 Ear6 protein_coding protein_coding MGP_LPJ_T0101880.1 MGP_LPJ_G0039917.1 mouse_genomes_project 14 45635935 45636399 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0006675.1 MGP_LPJ_G0005525.1 mouse_genomes_project 14 16415355 16416708 - A830039N20Rik lincRNA lincRNA MGP_LPJ_T0101884.1 MGP_LPJ_G0039921.1 mouse_genomes_project 14 45702004 45702466 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0002552.1 MGP_LPJ_G0002451.1 mouse_genomes_project 14 49134961 49135021 + MGP_LPJ_P0002552 Traj37 TR_J_gene TR_J_gene MGP_LPJ_T0039617.1 MGP_LPJ_G0021334.1 mouse_genomes_project 14 54991323 55551049 - MGP_LPJ_P0039617 Atp8a2 protein_coding protein_coding MGP_LPJ_T0039618.1 MGP_LPJ_G0021334.1 mouse_genomes_project 14 55388579 55453080 - MGP_LPJ_P0039618 Atp8a2 protein_coding nonsense_mediated_decay MGP_LPJ_T0039619.1 MGP_LPJ_G0021334.1 mouse_genomes_project 14 55406425 55574186 - MGP_LPJ_P0039619 Atp8a2 protein_coding protein_coding MGP_LPJ_T0039620.1 MGP_LPJ_G0021334.1 mouse_genomes_project 14 55452779 55551201 - MGP_LPJ_P0039620 Atp8a2 protein_coding protein_coding MGP_LPJ_T0039621.1 MGP_LPJ_G0021334.1 mouse_genomes_project 14 55452838 55454500 - MGP_LPJ_P0039621 Atp8a2 protein_coding protein_coding MGP_LPJ_T0039624.1 MGP_LPJ_G0021334.1 mouse_genomes_project 14 55561299 55574150 - Atp8a2 protein_coding processed_transcript MGP_LPJ_T0002749.1 MGP_LPJ_G0002621.1 mouse_genomes_project 14 48711308 48711570 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0040092.1 MGP_LPJ_G0021515.1 mouse_genomes_project 14 94792657 95214677 - MGP_LPJ_P0040092 Dach1 protein_coding protein_coding MGP_LPJ_T0040093.1 MGP_LPJ_G0021515.1 mouse_genomes_project 14 94792657 95214677 - MGP_LPJ_P0040093 Dach1 protein_coding protein_coding MGP_LPJ_T0040094.1 MGP_LPJ_G0021515.1 mouse_genomes_project 14 94835323 95214900 - Dach1 protein_coding retained_intron MGP_LPJ_T0002698.1 MGP_LPJ_G0002578.1 mouse_genomes_project 14 48896161 48900325 + MGP_LPJ_P0002698 Trdv2-2 TR_V_gene TR_V_gene MGP_LPJ_T0002652.1 MGP_LPJ_G0002541.1 mouse_genomes_project 14 48088227 48088735 + MGP_LPJ_P0002652 TR_V_gene TR_V_gene MGP_LPJ_T0038858.1 MGP_LPJ_G0021089.1 mouse_genomes_project 14 34970792 34988201 + MGP_LPJ_P0038858 Mat1a protein_coding unknown_likely_coding MGP_LPJ_T0003547.1 MGP_LPJ_G0003224.1 mouse_genomes_project 14 16698117 16702997 + Gm29626 antisense antisense MGP_LPJ_T0003548.1 MGP_LPJ_G0003224.1 mouse_genomes_project 14 16698134 16702995 + Gm29626 antisense antisense MGP_LPJ_T0038233.1 MGP_LPJ_G0020913.1 mouse_genomes_project 14 7992528 8079215 - MGP_LPJ_P0038233 Lrrc3b protein_coding protein_coding MGP_LPJ_T0038234.1 MGP_LPJ_G0020913.1 mouse_genomes_project 14 7992529 8076736 - MGP_LPJ_P0038234 Lrrc3b protein_coding protein_coding MGP_LPJ_T0039260.1 MGP_LPJ_G0021214.1 mouse_genomes_project 14 49385991 49395680 + MGP_LPJ_P0039260 Mmp14 protein_coding protein_coding MGP_LPJ_T0039261.1 MGP_LPJ_G0021214.1 mouse_genomes_project 14 49386002 49390789 + MGP_LPJ_P0039261 Mmp14 protein_coding nonsense_mediated_decay MGP_LPJ_T0039262.1 MGP_LPJ_G0021214.1 mouse_genomes_project 14 49386043 49390761 + Mmp14 protein_coding retained_intron MGP_LPJ_T0039263.1 MGP_LPJ_G0021214.1 mouse_genomes_project 14 49386097 49387645 + Mmp14 protein_coding retained_intron MGP_LPJ_T0039264.1 MGP_LPJ_G0021214.1 mouse_genomes_project 14 49386219 49395111 + MGP_LPJ_P0039264 Mmp14 protein_coding unknown_likely_coding MGP_LPJ_T0039265.1 MGP_LPJ_G0021214.1 mouse_genomes_project 14 49386815 49390472 + MGP_LPJ_P0039265 Mmp14 protein_coding protein_coding MGP_LPJ_T0038645.1 MGP_LPJ_G0021017.1 mouse_genomes_project 14 24738821 24755441 - MGP_LPJ_P0038645 Phf7 protein_coding protein_coding MGP_LPJ_T0039842.1 MGP_LPJ_G0021425.1 mouse_genomes_project 14 65543022 65554563 - MGP_LPJ_P0039842 R3hcc1 protein_coding protein_coding MGP_LPJ_T0039843.1 MGP_LPJ_G0021425.1 mouse_genomes_project 14 65543023 65554472 - MGP_LPJ_P0039843 R3hcc1 protein_coding protein_coding MGP_LPJ_T0039844.1 MGP_LPJ_G0021425.1 mouse_genomes_project 14 65544047 65545736 - R3hcc1 protein_coding retained_intron MGP_LPJ_T0039845.1 MGP_LPJ_G0021425.1 mouse_genomes_project 14 65549498 65552269 - R3hcc1 protein_coding retained_intron MGP_LPJ_T0039846.1 MGP_LPJ_G0021425.1 mouse_genomes_project 14 65552580 65554532 - R3hcc1 protein_coding processed_transcript MGP_LPJ_T0003599.1 MGP_LPJ_G0003266.1 mouse_genomes_project 14 121039088 121043629 - 1700108J01Rik antisense antisense MGP_LPJ_T0039918.1 MGP_LPJ_G0021454.1 mouse_genomes_project 14 66792581 66881002 + MGP_LPJ_P0039918 Gfra2 protein_coding protein_coding MGP_LPJ_T0100318.1 MGP_LPJ_G0038581.1 mouse_genomes_project 14 31018620 31018753 + Gm22469 snoRNA snoRNA MGP_LPJ_T0038820.1 MGP_LPJ_G0021075.1 mouse_genomes_project 14 29835043 29838429 + MGP_LPJ_P0038820 protein_coding protein_coding MGP_LPJ_T0038821.1 MGP_LPJ_G0021075.1 mouse_genomes_project 14 29835093 29842153 + MGP_LPJ_P0038821 protein_coding nonsense_mediated_decay MGP_LPJ_T0038689.1 MGP_LPJ_G0021029.1 mouse_genomes_project 14 25630287 25635330 - MGP_LPJ_P0038689 Dph3 protein_coding protein_coding MGP_LPJ_T0038690.1 MGP_LPJ_G0021029.1 mouse_genomes_project 14 25630290 25635330 - MGP_LPJ_P0038690 Dph3 protein_coding nonsense_mediated_decay MGP_LPJ_T0038691.1 MGP_LPJ_G0021029.1 mouse_genomes_project 14 25630290 25635330 - MGP_LPJ_P0038691 Dph3 protein_coding protein_coding MGP_LPJ_T0038692.1 MGP_LPJ_G0021029.1 mouse_genomes_project 14 25632478 25635330 - MGP_LPJ_P0038692 Dph3 protein_coding protein_coding MGP_LPJ_T0038693.1 MGP_LPJ_G0021029.1 mouse_genomes_project 14 25632592 25635413 - Dph3 protein_coding processed_transcript MGP_LPJ_T0038694.1 MGP_LPJ_G0021029.1 mouse_genomes_project 14 25632596 25635007 - Dph3 protein_coding retained_intron MGP_LPJ_T0038695.1 MGP_LPJ_G0021029.1 mouse_genomes_project 14 25634416 25635330 - MGP_LPJ_P0038695 Dph3 protein_coding protein_coding MGP_LPJ_T0038397.1 MGP_LPJ_G0020960.1 mouse_genomes_project 14 15086704 16167632 + MGP_LPJ_P0038397 1700112E06Rik protein_coding protein_coding MGP_LPJ_T0038398.1 MGP_LPJ_G0020960.1 mouse_genomes_project 14 15086813 15931615 + MGP_LPJ_P0038398 1700112E06Rik protein_coding protein_coding MGP_LPJ_T0038399.1 MGP_LPJ_G0020960.1 mouse_genomes_project 14 15086840 16167632 + MGP_LPJ_P0038399 1700112E06Rik protein_coding protein_coding MGP_LPJ_T0038400.1 MGP_LPJ_G0020960.1 mouse_genomes_project 14 15086840 15813450 + MGP_LPJ_P0038400 1700112E06Rik protein_coding protein_coding MGP_LPJ_T0038401.1 MGP_LPJ_G0020960.1 mouse_genomes_project 14 15384019 15673147 + 1700112E06Rik protein_coding processed_transcript MGP_LPJ_T0038402.1 MGP_LPJ_G0020960.1 mouse_genomes_project 14 15666441 15688689 + 1700112E06Rik protein_coding processed_transcript MGP_LPJ_T0006722.1 MGP_LPJ_G0005557.1 mouse_genomes_project 14 53265528 53269900 + 3110083C13Rik lincRNA lincRNA MGP_LPJ_T0038582.1 MGP_LPJ_G0021009.1 mouse_genomes_project 14 24502013 24508670 - MGP_LPJ_P0038582 Gnl3 protein_coding protein_coding MGP_LPJ_T0038333.1 MGP_LPJ_G0020946.1 mouse_genomes_project 14 13702120 13718076 + MGP_LPJ_P0038333 Zswim8 protein_coding protein_coding MGP_LPJ_T0040075.1 MGP_LPJ_G0021510.1 mouse_genomes_project 14 83923910 84051010 + MGP_LPJ_P0040075 Tdrd3 protein_coding protein_coding MGP_LPJ_T0040076.1 MGP_LPJ_G0021510.1 mouse_genomes_project 14 83923910 84082885 + MGP_LPJ_P0040076 Tdrd3 protein_coding protein_coding MGP_LPJ_T0040077.1 MGP_LPJ_G0021510.1 mouse_genomes_project 14 83923937 84082898 + MGP_LPJ_P0040077 Tdrd3 protein_coding protein_coding MGP_LPJ_T0040078.1 MGP_LPJ_G0021510.1 mouse_genomes_project 14 83992704 84015707 + MGP_LPJ_P0040078 Tdrd3 protein_coding protein_coding MGP_LPJ_T0040079.1 MGP_LPJ_G0021510.1 mouse_genomes_project 14 84007334 84021138 + MGP_LPJ_P0040079 Tdrd3 protein_coding protein_coding MGP_LPJ_T0038485.1 MGP_LPJ_G0020979.1 mouse_genomes_project 14 20148963 20168222 + MGP_LPJ_P0038485 Asb14 protein_coding protein_coding MGP_LPJ_T0038486.1 MGP_LPJ_G0020979.1 mouse_genomes_project 14 20149008 20167382 + MGP_LPJ_P0038486 Asb14 protein_coding protein_coding MGP_LPJ_T0038487.1 MGP_LPJ_G0020979.1 mouse_genomes_project 14 20149018 20155314 + Asb14 protein_coding processed_transcript MGP_LPJ_T0038488.1 MGP_LPJ_G0020979.1 mouse_genomes_project 14 20149026 20157514 + MGP_LPJ_P0038488 Asb14 protein_coding nonsense_mediated_decay MGP_LPJ_T0038489.1 MGP_LPJ_G0020979.1 mouse_genomes_project 14 20157463 20168223 + MGP_LPJ_P0038489 Asb14 protein_coding nonsense_mediated_decay MGP_LPJ_T0040190.1 MGP_LPJ_G0021549.1 mouse_genomes_project 14 116715297 116737090 - MGP_LPJ_P0040190 Tgds protein_coding protein_coding MGP_LPJ_T0039511.1 MGP_LPJ_G0021289.1 mouse_genomes_project 14 51217914 51220608 - MGP_LPJ_P0039511 Ctsg protein_coding protein_coding MGP_LPJ_T0002629.1 MGP_LPJ_G0002521.1 mouse_genomes_project 14 47363398 47363896 + MGP_LPJ_P0002629 TR_V_gene TR_V_gene MGP_LPJ_T0038165.1 MGP_LPJ_G0020889.1 mouse_genomes_project 14 409371 480468 + MGP_LPJ_P0038165 Pxk protein_coding protein_coding MGP_LPJ_T0038166.1 MGP_LPJ_G0020889.1 mouse_genomes_project 14 409371 480468 + MGP_LPJ_P0038166 Pxk protein_coding protein_coding MGP_LPJ_T0006691.1 MGP_LPJ_G0005534.1 mouse_genomes_project 14 21858900 21862221 - Gm2670 lincRNA lincRNA MGP_LPJ_T0002583.1 MGP_LPJ_G0002482.1 mouse_genomes_project 14 49177371 49177437 + MGP_LPJ_P0002583 Traj2 TR_J_gene TR_J_gene MGP_LPJ_T0039829.1 MGP_LPJ_G0021416.1 mouse_genomes_project 14 63899376 63905969 + MGP_LPJ_P0039829 Nefl protein_coding protein_coding MGP_LPJ_T0010036.1 MGP_LPJ_G0008154.1 mouse_genomes_project 14 113526158 113526238 + Mir92-1 miRNA miRNA MGP_LPJ_T0039431.1 MGP_LPJ_G0021259.1 mouse_genomes_project 14 50672195 50684173 + MGP_LPJ_P0039431 Rnf31 protein_coding protein_coding MGP_LPJ_T0039432.1 MGP_LPJ_G0021259.1 mouse_genomes_project 14 50672231 50678136 + MGP_LPJ_P0039432 Rnf31 protein_coding nonsense_mediated_decay MGP_LPJ_T0039433.1 MGP_LPJ_G0021259.1 mouse_genomes_project 14 50672762 50684144 + MGP_LPJ_P0039433 Rnf31 protein_coding protein_coding MGP_LPJ_T0039434.1 MGP_LPJ_G0021259.1 mouse_genomes_project 14 50672954 50673428 + Rnf31 protein_coding retained_intron MGP_LPJ_T0039435.1 MGP_LPJ_G0021259.1 mouse_genomes_project 14 50678864 50679430 + Rnf31 protein_coding retained_intron MGP_LPJ_T0039081.1 MGP_LPJ_G0021173.1 mouse_genomes_project 14 45399359 45401122 - MGP_LPJ_P0039081 Rnase1 protein_coding protein_coding MGP_LPJ_T0039901.1 MGP_LPJ_G0021447.1 mouse_genomes_project 14 66475517 66480241 + MGP_LPJ_P0039901 Nudt18 protein_coding protein_coding MGP_LPJ_T0003575.1 MGP_LPJ_G0003249.1 mouse_genomes_project 14 51768078 51782629 - Gm16573 antisense antisense MGP_LPJ_T0003576.1 MGP_LPJ_G0003249.1 mouse_genomes_project 14 51771605 51782645 - Gm16573 antisense antisense MGP_LPJ_T0003577.1 MGP_LPJ_G0003249.1 mouse_genomes_project 14 51778307 51782645 - Gm16573 antisense antisense MGP_LPJ_T0039478.1 MGP_LPJ_G0021268.1 mouse_genomes_project 14 50767960 50770695 - MGP_LPJ_P0039478 Tinf2 protein_coding protein_coding MGP_LPJ_T0099047.1 MGP_LPJ_G0037310.1 mouse_genomes_project 14 11128202 11128358 + Gm22350 snRNA snRNA MGP_LPJ_T0038157.1 MGP_LPJ_G0020885.1 mouse_genomes_project 14 119914 258991 + MGP_LPJ_P0038157 Flnb protein_coding protein_coding MGP_LPJ_T0038158.1 MGP_LPJ_G0020885.1 mouse_genomes_project 14 120109 242326 + MGP_LPJ_P0038158 Flnb protein_coding unknown_likely_coding MGP_LPJ_T0006690.1 MGP_LPJ_G0005533.1 mouse_genomes_project 14 19624803 19630836 + Slmapos2 lincRNA lincRNA MGP_LPJ_T0013039.1 MGP_LPJ_G0011130.1 mouse_genomes_project 14 116786203 116787307 - processed_pseudogene processed_pseudogene MGP_LPJ_T0040248.1 MGP_LPJ_G0021577.1 mouse_genomes_project 14 121348598 121404659 + protein_coding retained_intron MGP_LPJ_T0040249.1 MGP_LPJ_G0021577.1 mouse_genomes_project 14 121348605 121440863 + MGP_LPJ_P0040249 protein_coding protein_coding MGP_LPJ_T0040250.1 MGP_LPJ_G0021577.1 mouse_genomes_project 14 121348613 121712627 + MGP_LPJ_P0040250 protein_coding protein_coding MGP_LPJ_T0040251.1 MGP_LPJ_G0021577.1 mouse_genomes_project 14 121348619 121473959 + MGP_LPJ_P0040251 protein_coding protein_coding MGP_LPJ_T0040252.1 MGP_LPJ_G0021577.1 mouse_genomes_project 14 121404365 121712511 + MGP_LPJ_P0040252 protein_coding nonsense_mediated_decay MGP_LPJ_T0040253.1 MGP_LPJ_G0021577.1 mouse_genomes_project 14 121427206 121488283 + protein_coding processed_transcript MGP_LPJ_T0040254.1 MGP_LPJ_G0021577.1 mouse_genomes_project 14 121538327 121712508 + MGP_LPJ_P0040254 protein_coding nonsense_mediated_decay MGP_LPJ_T0040255.1 MGP_LPJ_G0021577.1 mouse_genomes_project 14 121603147 121712503 + MGP_LPJ_P0040255 protein_coding protein_coding MGP_LPJ_T0040257.1 MGP_LPJ_G0021577.1 mouse_genomes_project 14 121698617 121713783 + protein_coding processed_transcript MGP_LPJ_T0040258.1 MGP_LPJ_G0021577.1 mouse_genomes_project 14 121709585 121712511 + protein_coding retained_intron MGP_LPJ_T0039653.1 MGP_LPJ_G0021347.1 mouse_genomes_project 14 56781272 56859576 - MGP_LPJ_P0039653 Kpna3 protein_coding protein_coding MGP_LPJ_T0002701.1 MGP_LPJ_G0002581.1 mouse_genomes_project 14 49101068 49101701 - MGP_LPJ_P0002701 Trdv5 TR_V_gene TR_V_gene MGP_LPJ_T0040229.1 MGP_LPJ_G0021565.1 mouse_genomes_project 14 120216897 120263363 - MGP_LPJ_P0040229 Slc15a1 protein_coding protein_coding MGP_LPJ_T0039993.1 MGP_LPJ_G0021473.1 mouse_genomes_project 14 71455820 71530770 + MGP_LPJ_P0039993 Siah3 protein_coding protein_coding MGP_LPJ_T0038708.1 MGP_LPJ_G0021031.1 mouse_genomes_project 14 25693448 25712569 + MGP_LPJ_P0038708 Msmb protein_coding protein_coding MGP_LPJ_T0038709.1 MGP_LPJ_G0021031.1 mouse_genomes_project 14 25701635 25712569 + MGP_LPJ_P0038709 Msmb protein_coding protein_coding MGP_LPJ_T0017320.1 MGP_LPJ_G0015183.1 mouse_genomes_project 14 14905401 14908913 + A430057M04Rik processed_transcript processed_transcript MGP_LPJ_T0017321.1 MGP_LPJ_G0015183.1 mouse_genomes_project 14 14906325 14914858 + A430057M04Rik processed_transcript processed_transcript MGP_LPJ_T0039032.1 MGP_LPJ_G0021148.1 mouse_genomes_project 14 44809234 44810445 + MGP_LPJ_P0039032 Olfr744 protein_coding protein_coding MGP_LPJ_T0012979.1 MGP_LPJ_G0011070.1 mouse_genomes_project 14 25827709 25828865 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101875.1 MGP_LPJ_G0039912.1 mouse_genomes_project 14 45359730 45360165 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0100320.1 MGP_LPJ_G0038583.1 mouse_genomes_project 14 46691892 46691962 + Gm22354 snoRNA snoRNA MGP_LPJ_T0002537.1 MGP_LPJ_G0002438.1 mouse_genomes_project 14 49121009 49121072 + MGP_LPJ_P0002537 Traj50 TR_J_gene TR_J_gene MGP_LPJ_T0012994.1 MGP_LPJ_G0011085.1 mouse_genomes_project 14 47064136 47064421 + processed_pseudogene processed_pseudogene MGP_LPJ_T0038802.1 MGP_LPJ_G0021069.1 mouse_genomes_project 14 28200135 28212336 - MGP_LPJ_P0038802 9230112D13Rik protein_coding protein_coding MGP_LPJ_T0040024.1 MGP_LPJ_G0021485.1 mouse_genomes_project 14 73142556 73156884 - MGP_LPJ_P0040024 Lacc1 protein_coding protein_coding MGP_LPJ_T0040025.1 MGP_LPJ_G0021485.1 mouse_genomes_project 14 73152531 73157147 - Lacc1 protein_coding retained_intron MGP_LPJ_T0040026.1 MGP_LPJ_G0021485.1 mouse_genomes_project 14 73155185 73156325 - MGP_LPJ_P0040026 Lacc1 protein_coding protein_coding MGP_LPJ_T0098494.1 MGP_LPJ_G0036771.1 mouse_genomes_project 14 17410698 17415902 - Gm17105 sense_intronic sense_intronic MGP_LPJ_T0038435.1 MGP_LPJ_G0020966.1 mouse_genomes_project 14 18664641 18746745 + Zmiz1 protein_coding retained_intron MGP_LPJ_T0038436.1 MGP_LPJ_G0020966.1 mouse_genomes_project 14 18664680 18876885 + MGP_LPJ_P0038436 Zmiz1 protein_coding protein_coding MGP_LPJ_T0038437.1 MGP_LPJ_G0020966.1 mouse_genomes_project 14 18664723 18874861 + MGP_LPJ_P0038437 Zmiz1 protein_coding protein_coding MGP_LPJ_T0038438.1 MGP_LPJ_G0020966.1 mouse_genomes_project 14 18664748 18859733 + Zmiz1 protein_coding retained_intron MGP_LPJ_T0038439.1 MGP_LPJ_G0020966.1 mouse_genomes_project 14 18665011 18777938 + Zmiz1 protein_coding processed_transcript MGP_LPJ_T0038440.1 MGP_LPJ_G0020966.1 mouse_genomes_project 14 18813723 18853789 + Zmiz1 protein_coding processed_transcript MGP_LPJ_T0038441.1 MGP_LPJ_G0020966.1 mouse_genomes_project 14 18814204 18855892 + MGP_LPJ_P0038441 Zmiz1 protein_coding protein_coding MGP_LPJ_T0038442.1 MGP_LPJ_G0020966.1 mouse_genomes_project 14 18866972 18868548 + Zmiz1 protein_coding retained_intron MGP_LPJ_T0002603.1 MGP_LPJ_G0002500.1 mouse_genomes_project 14 49113811 49113874 + TR_J_pseudogene TR_J_pseudogene MGP_LPJ_T0038581.1 MGP_LPJ_G0021008.1 mouse_genomes_project 14 24492705 24501574 + MGP_LPJ_P0038581 Glt8d1 protein_coding unknown_likely_coding MGP_LPJ_T0038817.1 MGP_LPJ_G0021073.1 mouse_genomes_project 14 28513533 29298393 + MGP_LPJ_P0038817 Grid1 protein_coding protein_coding MGP_LPJ_T0038818.1 MGP_LPJ_G0021073.1 mouse_genomes_project 14 29283668 29296043 + Grid1 protein_coding processed_transcript MGP_LPJ_T0098171.1 MGP_LPJ_G0036452.1 mouse_genomes_project 14 107985123 107985234 + n-R5s50 rRNA rRNA MGP_LPJ_T0003590.1 MGP_LPJ_G0003260.1 mouse_genomes_project 14 68541681 68554767 + Gm16549 antisense antisense MGP_LPJ_T0038452.1 MGP_LPJ_G0020971.1 mouse_genomes_project 14 19103169 19106285 - MGP_LPJ_P0038452 protein_coding protein_coding MGP_LPJ_T0013042.1 MGP_LPJ_G0011133.1 mouse_genomes_project 14 122543703 122543917 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006693.1 MGP_LPJ_G0005536.1 mouse_genomes_project 14 26035497 26053994 + Gm2990 lincRNA lincRNA MGP_LPJ_T0006740.1 MGP_LPJ_G0005570.1 mouse_genomes_project 14 72576112 72582442 - 4930444M15Rik lincRNA lincRNA MGP_LPJ_T0003543.1 MGP_LPJ_G0003222.1 mouse_genomes_project 14 14791871 14796681 + Gm15935 antisense antisense MGP_LPJ_T0003544.1 MGP_LPJ_G0003222.1 mouse_genomes_project 14 14791893 14796976 + Gm15935 antisense antisense MGP_LPJ_T0003545.1 MGP_LPJ_G0003222.1 mouse_genomes_project 14 14791917 14796427 + Gm15935 antisense antisense MGP_LPJ_T0002682.1 MGP_LPJ_G0002567.1 mouse_genomes_project 14 48687954 48688466 + MGP_LPJ_P0002682 TR_V_gene TR_V_gene MGP_LPJ_T0002684.1 MGP_LPJ_G0002567.1 mouse_genomes_project 14 48688195 48688459 + MGP_LPJ_P0002684 TR_V_gene TR_V_gene MGP_LPJ_T0038481.1 MGP_LPJ_G0020978.1 mouse_genomes_project 14 19944890 20073226 + MGP_LPJ_P0038481 Dnah12 protein_coding protein_coding MGP_LPJ_T0038482.1 MGP_LPJ_G0020978.1 mouse_genomes_project 14 19945062 20146059 + MGP_LPJ_P0038482 Dnah12 protein_coding unknown_likely_coding MGP_LPJ_T0038483.1 MGP_LPJ_G0020978.1 mouse_genomes_project 14 20023244 20025988 + MGP_LPJ_P0038483 Dnah12 protein_coding protein_coding MGP_LPJ_T0038484.1 MGP_LPJ_G0020978.1 mouse_genomes_project 14 20088061 20146128 + MGP_LPJ_P0038484 Dnah12 protein_coding protein_coding MGP_LPJ_T0099051.1 MGP_LPJ_G0037314.1 mouse_genomes_project 14 20818445 20818554 + Gm22485 snRNA snRNA MGP_LPJ_T0099063.1 MGP_LPJ_G0037326.1 mouse_genomes_project 14 45163368 45163472 + Gm24689 snRNA snRNA MGP_LPJ_T0039577.1 MGP_LPJ_G0021318.1 mouse_genomes_project 14 53059469 53080102 - MGP_LPJ_P0039577 Ska3 protein_coding protein_coding MGP_LPJ_T0006681.1 MGP_LPJ_G0005529.1 mouse_genomes_project 14 18101994 18106011 + Gm10398 lincRNA lincRNA MGP_LPJ_T0040059.1 MGP_LPJ_G0021503.1 mouse_genomes_project 14 75820360 75865296 + MGP_LPJ_P0040059 Sugt1 protein_coding protein_coding MGP_LPJ_T0002657.1 MGP_LPJ_G0002546.1 mouse_genomes_project 14 48241493 48242069 + MGP_LPJ_P0002657 Trav6-4 TR_V_gene TR_V_gene MGP_LPJ_T0040178.1 MGP_LPJ_G0021543.1 mouse_genomes_project 14 106599192 106603435 - MGP_LPJ_P0040178 Slitrk1 protein_coding protein_coding MGP_LPJ_T0039018.1 MGP_LPJ_G0021137.1 mouse_genomes_project 14 44457920 44458964 - MGP_LPJ_P0039018 Olfr732 protein_coding protein_coding MGP_LPJ_T0039704.1 MGP_LPJ_G0021370.1 mouse_genomes_project 14 59073726 59094707 - MGP_LPJ_P0039704 Mtmr9 protein_coding protein_coding MGP_LPJ_T0009986.1 MGP_LPJ_G0008104.1 mouse_genomes_project 14 6285480 6285560 - Gm27907 miRNA miRNA MGP_LPJ_T0002542.1 MGP_LPJ_G0002441.1 mouse_genomes_project 14 49125301 49125358 + MGP_LPJ_P0002542 Traj47 TR_J_gene TR_J_gene MGP_LPJ_T0100312.1 MGP_LPJ_G0038575.1 mouse_genomes_project 14 24504728 24504807 - Gm24916 snoRNA snoRNA MGP_LPJ_T0040273.1 MGP_LPJ_G0021581.1 mouse_genomes_project 14 122518174 122816605 + MGP_LPJ_P0040273 Itgbl1 protein_coding protein_coding MGP_LPJ_T0040274.1 MGP_LPJ_G0021581.1 mouse_genomes_project 14 122518328 122816043 + MGP_LPJ_P0040274 Itgbl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0040275.1 MGP_LPJ_G0021581.1 mouse_genomes_project 14 122519627 122816605 + MGP_LPJ_P0040275 Itgbl1 protein_coding protein_coding MGP_LPJ_T0040217.1 MGP_LPJ_G0021559.1 mouse_genomes_project 14 118716076 118739088 - MGP_LPJ_P0040217 Oxgr1 protein_coding protein_coding MGP_LPJ_T0039873.1 MGP_LPJ_G0021438.1 mouse_genomes_project 14 66190433 66239685 - MGP_LPJ_P0039873 Slc39a14 protein_coding protein_coding MGP_LPJ_T0039874.1 MGP_LPJ_G0021438.1 mouse_genomes_project 14 66193163 66236694 - MGP_LPJ_P0039874 Slc39a14 protein_coding protein_coding MGP_LPJ_T0039875.1 MGP_LPJ_G0021438.1 mouse_genomes_project 14 66193177 66239685 - MGP_LPJ_P0039875 Slc39a14 protein_coding protein_coding MGP_LPJ_T0039876.1 MGP_LPJ_G0021438.1 mouse_genomes_project 14 66195681 66198115 - Slc39a14 protein_coding retained_intron MGP_LPJ_T0039877.1 MGP_LPJ_G0021438.1 mouse_genomes_project 14 66197811 66200800 - Slc39a14 protein_coding retained_intron MGP_LPJ_T0039878.1 MGP_LPJ_G0021438.1 mouse_genomes_project 14 66200833 66239674 - Slc39a14 protein_coding retained_intron MGP_LPJ_T0039879.1 MGP_LPJ_G0021438.1 mouse_genomes_project 14 66201984 66236696 - Slc39a14 protein_coding retained_intron MGP_LPJ_T0039880.1 MGP_LPJ_G0021438.1 mouse_genomes_project 14 66202666 66221355 - MGP_LPJ_P0039880 Slc39a14 protein_coding protein_coding MGP_LPJ_T0039881.1 MGP_LPJ_G0021438.1 mouse_genomes_project 14 66203338 66239654 - MGP_LPJ_P0039881 Slc39a14 protein_coding protein_coding MGP_LPJ_T0039882.1 MGP_LPJ_G0021438.1 mouse_genomes_project 14 66203372 66210655 - MGP_LPJ_P0039882 Slc39a14 protein_coding protein_coding MGP_LPJ_T0039883.1 MGP_LPJ_G0021438.1 mouse_genomes_project 14 66203433 66239675 - MGP_LPJ_P0039883 Slc39a14 protein_coding protein_coding MGP_LPJ_T0039884.1 MGP_LPJ_G0021438.1 mouse_genomes_project 14 66205605 66218701 - MGP_LPJ_P0039884 Slc39a14 protein_coding protein_coding MGP_LPJ_T0039885.1 MGP_LPJ_G0021438.1 mouse_genomes_project 14 66218259 66239685 - Slc39a14 protein_coding retained_intron MGP_LPJ_T0100331.1 MGP_LPJ_G0038594.1 mouse_genomes_project 14 60364834 60364970 + Gm26225 snoRNA snoRNA MGP_LPJ_T0039485.1 MGP_LPJ_G0021271.1 mouse_genomes_project 14 50829769 50830410 - Dhrs1 protein_coding retained_intron MGP_LPJ_T0039486.1 MGP_LPJ_G0021271.1 mouse_genomes_project 14 50829769 50836353 - Dhrs1 protein_coding retained_intron MGP_LPJ_T0039487.1 MGP_LPJ_G0021271.1 mouse_genomes_project 14 50829771 50836444 - MGP_LPJ_P0039487 Dhrs1 protein_coding protein_coding MGP_LPJ_T0039488.1 MGP_LPJ_G0021271.1 mouse_genomes_project 14 50829983 50830894 - Dhrs1 protein_coding retained_intron MGP_LPJ_T0003558.1 MGP_LPJ_G0003234.1 mouse_genomes_project 14 32688797 32755810 + Nrg3os antisense antisense MGP_LPJ_T0017311.1 MGP_LPJ_G0015178.1 mouse_genomes_project 14 34897 89438 - Gm10044 processed_transcript antisense MGP_LPJ_T0017313.1 MGP_LPJ_G0015178.1 mouse_genomes_project 14 47050 89362 - Gm10044 processed_transcript antisense MGP_LPJ_T0017314.1 MGP_LPJ_G0015178.1 mouse_genomes_project 14 55464 67698 - Gm10044 processed_transcript antisense MGP_LPJ_T0017315.1 MGP_LPJ_G0015178.1 mouse_genomes_project 14 64546 67768 - Gm10044 processed_transcript retained_intron MGP_LPJ_T0017316.1 MGP_LPJ_G0015178.1 mouse_genomes_project 14 64779 89340 - Gm10044 processed_transcript antisense MGP_LPJ_T0006683.1 MGP_LPJ_G0005531.1 mouse_genomes_project 14 18756642 18762686 - Gm26772 lincRNA lincRNA MGP_LPJ_T0038520.1 MGP_LPJ_G0020995.1 mouse_genomes_project 14 23464179 23794185 - MGP_LPJ_P0038520 Cacna1d protein_coding unknown_likely_coding MGP_LPJ_T0038521.1 MGP_LPJ_G0020995.1 mouse_genomes_project 14 23464190 23794549 - MGP_LPJ_P0038521 Cacna1d protein_coding protein_coding MGP_LPJ_T0038522.1 MGP_LPJ_G0020995.1 mouse_genomes_project 14 23464190 23938656 - MGP_LPJ_P0038522 Cacna1d protein_coding protein_coding MGP_LPJ_T0040185.1 MGP_LPJ_G0021547.1 mouse_genomes_project 14 115489542 116568183 + MGP_LPJ_P0040185 Gpc6 protein_coding protein_coding MGP_LPJ_T0040186.1 MGP_LPJ_G0021547.1 mouse_genomes_project 14 115489560 116201625 + Gpc6 protein_coding retained_intron MGP_LPJ_T0040187.1 MGP_LPJ_G0021547.1 mouse_genomes_project 14 115489675 116564128 + MGP_LPJ_P0040187 Gpc6 protein_coding protein_coding MGP_LPJ_T0040188.1 MGP_LPJ_G0021547.1 mouse_genomes_project 14 115489776 116562990 + MGP_LPJ_P0040188 Gpc6 protein_coding protein_coding MGP_LPJ_T0039278.1 MGP_LPJ_G0021219.1 mouse_genomes_project 14 49533547 49543772 - MGP_LPJ_P0039278 Ajuba protein_coding protein_coding MGP_LPJ_T0002685.1 MGP_LPJ_G0002569.1 mouse_genomes_project 14 48693897 48694456 + MGP_LPJ_P0002685 TR_V_gene TR_V_gene MGP_LPJ_T0099092.1 MGP_LPJ_G0037355.1 mouse_genomes_project 14 110288099 110288191 - Gm22764 snRNA snRNA MGP_LPJ_T0039010.1 MGP_LPJ_G0021129.1 mouse_genomes_project 14 44096121 44142165 - MGP_LPJ_P0039010 protein_coding protein_coding MGP_LPJ_T0038790.1 MGP_LPJ_G0021064.1 mouse_genomes_project 14 27993165 28027001 + MGP_LPJ_P0038790 Glud1 protein_coding protein_coding MGP_LPJ_T0038791.1 MGP_LPJ_G0021064.1 mouse_genomes_project 14 28010575 28016139 + Glud1 protein_coding retained_intron MGP_LPJ_T0038792.1 MGP_LPJ_G0021064.1 mouse_genomes_project 14 28014120 28021023 + Glud1 protein_coding processed_transcript MGP_LPJ_T0038793.1 MGP_LPJ_G0021064.1 mouse_genomes_project 14 28016181 28024035 + MGP_LPJ_P0038793 Glud1 protein_coding protein_coding MGP_LPJ_T0038794.1 MGP_LPJ_G0021064.1 mouse_genomes_project 14 28017514 28023825 + Glud1 protein_coding processed_transcript MGP_LPJ_T0006730.1 MGP_LPJ_G0005564.1 mouse_genomes_project 14 58335741 58337041 - Gm26536 lincRNA lincRNA MGP_LPJ_T0038509.1 MGP_LPJ_G0020990.1 mouse_genomes_project 14 22412700 22428116 + MGP_LPJ_P0038509 Lrtm1 protein_coding protein_coding MGP_LPJ_T0002551.1 MGP_LPJ_G0002450.1 mouse_genomes_project 14 49134018 49134080 + MGP_LPJ_P0002551 Traj38 TR_J_gene TR_J_gene MGP_LPJ_T0038882.1 MGP_LPJ_G0021101.1 mouse_genomes_project 14 39287388 39300318 - MGP_LPJ_P0038882 Gnpnat1 protein_coding protein_coding MGP_LPJ_T0039322.1 MGP_LPJ_G0021232.1 mouse_genomes_project 14 49885332 49890167 + MGP_LPJ_P0039322 Bcl2l2 protein_coding protein_coding MGP_LPJ_T0039323.1 MGP_LPJ_G0021232.1 mouse_genomes_project 14 49885336 49886013 + Bcl2l2 protein_coding retained_intron MGP_LPJ_T0039325.1 MGP_LPJ_G0021232.1 mouse_genomes_project 14 49885411 49887485 + MGP_LPJ_P0039325 Bcl2l2 protein_coding protein_coding MGP_LPJ_T0039326.1 MGP_LPJ_G0021232.1 mouse_genomes_project 14 49885462 49890028 + MGP_LPJ_P0039326 Bcl2l2 protein_coding protein_coding MGP_LPJ_T0013027.1 MGP_LPJ_G0011118.1 mouse_genomes_project 14 95159719 95160217 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002515.1 MGP_LPJ_G0002421.1 mouse_genomes_project 14 49095339 49101275 + MGP_LPJ_P0002515 Trdc TR_C_gene TR_C_gene MGP_LPJ_T0010015.1 MGP_LPJ_G0008133.1 mouse_genomes_project 14 60188610 60188697 + Mir3078 miRNA miRNA MGP_LPJ_T0038835.1 MGP_LPJ_G0021080.1 mouse_genomes_project 14 30874037 30894496 - MGP_LPJ_P0038835 Cdhr1 protein_coding protein_coding MGP_LPJ_T0038774.1 MGP_LPJ_G0021051.1 mouse_genomes_project 14 27213991 27272252 + MGP_LPJ_P0038774 Ptpn20 protein_coding protein_coding MGP_LPJ_T0038836.1 MGP_LPJ_G0021081.1 mouse_genomes_project 14 30898345 30910375 - 2610528A11Rik protein_coding processed_transcript MGP_LPJ_T0038837.1 MGP_LPJ_G0021081.1 mouse_genomes_project 14 30898347 30906275 - MGP_LPJ_P0038837 2610528A11Rik protein_coding protein_coding MGP_LPJ_T0013029.1 MGP_LPJ_G0011120.1 mouse_genomes_project 14 96067316 96067637 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012977.1 MGP_LPJ_G0011068.1 mouse_genomes_project 14 22611323 22611815 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006752.1 MGP_LPJ_G0005580.1 mouse_genomes_project 14 118437578 118439918 + 1700006F04Rik lincRNA lincRNA MGP_LPJ_T0002677.1 MGP_LPJ_G0002564.1 mouse_genomes_project 14 48550146 48550724 + MGP_LPJ_P0002677 TR_V_gene TR_V_gene MGP_LPJ_T0038901.1 MGP_LPJ_G0021105.1 mouse_genomes_project 14 40334503 40341630 - MGP_LPJ_P0038901 Bmp4 protein_coding protein_coding MGP_LPJ_T0038902.1 MGP_LPJ_G0021105.1 mouse_genomes_project 14 40334690 40341511 - MGP_LPJ_P0038902 Bmp4 protein_coding protein_coding MGP_LPJ_T0038903.1 MGP_LPJ_G0021105.1 mouse_genomes_project 14 40337955 40341496 - Bmp4 protein_coding retained_intron MGP_LPJ_T0038524.1 MGP_LPJ_G0020997.1 mouse_genomes_project 14 23998010 23998788 + Tkt protein_coding processed_transcript MGP_LPJ_T0038525.1 MGP_LPJ_G0020997.1 mouse_genomes_project 14 23998782 24024438 + MGP_LPJ_P0038525 Tkt protein_coding protein_coding MGP_LPJ_T0038526.1 MGP_LPJ_G0020997.1 mouse_genomes_project 14 23998832 24012054 + Tkt protein_coding retained_intron MGP_LPJ_T0038527.1 MGP_LPJ_G0020997.1 mouse_genomes_project 14 23998862 24010260 + MGP_LPJ_P0038527 Tkt protein_coding nonsense_mediated_decay MGP_LPJ_T0038528.1 MGP_LPJ_G0020997.1 mouse_genomes_project 14 24019420 24020736 + Tkt protein_coding retained_intron MGP_LPJ_T0038583.1 MGP_LPJ_G0021010.1 mouse_genomes_project 14 24508718 24614844 + MGP_LPJ_P0038583 Pbrm1 protein_coding protein_coding MGP_LPJ_T0038584.1 MGP_LPJ_G0021010.1 mouse_genomes_project 14 24508718 24617536 + MGP_LPJ_P0038584 Pbrm1 protein_coding protein_coding MGP_LPJ_T0038585.1 MGP_LPJ_G0021010.1 mouse_genomes_project 14 24508729 24517104 + MGP_LPJ_P0038585 Pbrm1 protein_coding protein_coding MGP_LPJ_T0038586.1 MGP_LPJ_G0021010.1 mouse_genomes_project 14 24508737 24578218 + MGP_LPJ_P0038586 Pbrm1 protein_coding protein_coding MGP_LPJ_T0038587.1 MGP_LPJ_G0021010.1 mouse_genomes_project 14 24508750 24614910 + MGP_LPJ_P0038587 Pbrm1 protein_coding protein_coding MGP_LPJ_T0038588.1 MGP_LPJ_G0021010.1 mouse_genomes_project 14 24508757 24517072 + MGP_LPJ_P0038588 Pbrm1 protein_coding protein_coding MGP_LPJ_T0038589.1 MGP_LPJ_G0021010.1 mouse_genomes_project 14 24508779 24521631 + Pbrm1 protein_coding processed_transcript MGP_LPJ_T0038590.1 MGP_LPJ_G0021010.1 mouse_genomes_project 14 24508788 24615062 + MGP_LPJ_P0038590 Pbrm1 protein_coding protein_coding MGP_LPJ_T0038591.1 MGP_LPJ_G0021010.1 mouse_genomes_project 14 24515080 24614909 + MGP_LPJ_P0038591 Pbrm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038592.1 MGP_LPJ_G0021010.1 mouse_genomes_project 14 24515080 24609888 + MGP_LPJ_P0038592 Pbrm1 protein_coding protein_coding MGP_LPJ_T0038593.1 MGP_LPJ_G0021010.1 mouse_genomes_project 14 24515083 24614891 + MGP_LPJ_P0038593 Pbrm1 protein_coding protein_coding MGP_LPJ_T0038594.1 MGP_LPJ_G0021010.1 mouse_genomes_project 14 24515083 24615963 + MGP_LPJ_P0038594 Pbrm1 protein_coding protein_coding MGP_LPJ_T0038595.1 MGP_LPJ_G0021010.1 mouse_genomes_project 14 24515083 24614910 + MGP_LPJ_P0038595 Pbrm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038596.1 MGP_LPJ_G0021010.1 mouse_genomes_project 14 24515083 24614890 + MGP_LPJ_P0038596 Pbrm1 protein_coding protein_coding MGP_LPJ_T0038597.1 MGP_LPJ_G0021010.1 mouse_genomes_project 14 24515084 24615986 + MGP_LPJ_P0038597 Pbrm1 protein_coding protein_coding MGP_LPJ_T0038598.1 MGP_LPJ_G0021010.1 mouse_genomes_project 14 24517051 24580794 + MGP_LPJ_P0038598 Pbrm1 protein_coding protein_coding MGP_LPJ_T0038599.1 MGP_LPJ_G0021010.1 mouse_genomes_project 14 24579823 24583790 + Pbrm1 protein_coding retained_intron MGP_LPJ_T0039054.1 MGP_LPJ_G0021161.1 mouse_genomes_project 14 45171290 45174294 + MGP_LPJ_P0039054 Apex1 protein_coding protein_coding MGP_LPJ_T0039055.1 MGP_LPJ_G0021161.1 mouse_genomes_project 14 45171291 45173706 + MGP_LPJ_P0039055 Apex1 protein_coding protein_coding MGP_LPJ_T0039056.1 MGP_LPJ_G0021161.1 mouse_genomes_project 14 45171300 45171956 + MGP_LPJ_P0039056 Apex1 protein_coding protein_coding MGP_LPJ_T0039057.1 MGP_LPJ_G0021161.1 mouse_genomes_project 14 45171607 45174294 + MGP_LPJ_P0039057 Apex1 protein_coding protein_coding MGP_LPJ_T0038785.1 MGP_LPJ_G0021061.1 mouse_genomes_project 14 27869447 27876613 - MGP_LPJ_P0038785 Gprin2 protein_coding protein_coding MGP_LPJ_T0101885.1 MGP_LPJ_G0039922.1 mouse_genomes_project 14 46367658 46368108 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0039894.1 MGP_LPJ_G0021444.1 mouse_genomes_project 14 66428425 66435957 + MGP_LPJ_P0039894 Lgi3 protein_coding protein_coding MGP_LPJ_T0000949.1 MGP_LPJ_G0000877.1 mouse_genomes_project 14 57105974 57110026 - TEC TEC MGP_LPJ_T0003532.1 MGP_LPJ_G0003217.1 mouse_genomes_project 14 4310780 4327571 - Gm3848 antisense antisense MGP_LPJ_T0003533.1 MGP_LPJ_G0003217.1 mouse_genomes_project 14 4326559 4327556 - Gm3848 antisense antisense MGP_LPJ_T0038513.1 MGP_LPJ_G0020993.1 mouse_genomes_project 14 23420383 23433055 - MGP_LPJ_P0038513 Il17rb protein_coding nonsense_mediated_decay MGP_LPJ_T0038514.1 MGP_LPJ_G0020993.1 mouse_genomes_project 14 23420410 23433138 - MGP_LPJ_P0038514 Il17rb protein_coding protein_coding MGP_LPJ_T0038515.1 MGP_LPJ_G0020993.1 mouse_genomes_project 14 23420410 23433138 - MGP_LPJ_P0038515 Il17rb protein_coding protein_coding MGP_LPJ_T0038516.1 MGP_LPJ_G0020993.1 mouse_genomes_project 14 23420441 23433051 - MGP_LPJ_P0038516 Il17rb protein_coding nonsense_mediated_decay MGP_LPJ_T0002569.1 MGP_LPJ_G0002468.1 mouse_genomes_project 14 49158304 49158365 + MGP_LPJ_P0002569 Traj19 TR_J_gene TR_J_gene MGP_LPJ_T0100310.1 MGP_LPJ_G0038573.1 mouse_genomes_project 14 20857374 20857472 - Gm25697 snoRNA snoRNA MGP_LPJ_T0038471.1 MGP_LPJ_G0020974.1 mouse_genomes_project 14 19758904 19759261 + MGP_LPJ_P0038471 Gm2178 protein_coding protein_coding MGP_LPJ_T0039896.1 MGP_LPJ_G0021446.1 mouse_genomes_project 14 66450597 66453106 + Hr protein_coding processed_transcript MGP_LPJ_T0039897.1 MGP_LPJ_G0021446.1 mouse_genomes_project 14 66450630 66453052 + Hr protein_coding processed_transcript MGP_LPJ_T0039898.1 MGP_LPJ_G0021446.1 mouse_genomes_project 14 66452072 66470546 + MGP_LPJ_P0039898 Hr protein_coding protein_coding MGP_LPJ_T0039899.1 MGP_LPJ_G0021446.1 mouse_genomes_project 14 66452441 66471194 + MGP_LPJ_P0039899 Hr protein_coding protein_coding MGP_LPJ_T0039900.1 MGP_LPJ_G0021446.1 mouse_genomes_project 14 66454286 66471190 + MGP_LPJ_P0039900 Hr protein_coding protein_coding MGP_LPJ_T0038184.1 MGP_LPJ_G0020896.1 mouse_genomes_project 14 1870473 2764144 - MGP_LPJ_P0038184 Fhit protein_coding protein_coding MGP_LPJ_T0038185.1 MGP_LPJ_G0020896.1 mouse_genomes_project 14 1870481 3460871 - MGP_LPJ_P0038185 Fhit protein_coding protein_coding MGP_LPJ_T0038186.1 MGP_LPJ_G0020896.1 mouse_genomes_project 14 1870481 3460868 - MGP_LPJ_P0038186 Fhit protein_coding protein_coding MGP_LPJ_T0038187.1 MGP_LPJ_G0020896.1 mouse_genomes_project 14 1870774 2732290 - MGP_LPJ_P0038187 Fhit protein_coding protein_coding MGP_LPJ_T0038188.1 MGP_LPJ_G0020896.1 mouse_genomes_project 14 1896273 3422823 - MGP_LPJ_P0038188 Fhit protein_coding protein_coding MGP_LPJ_T0038189.1 MGP_LPJ_G0020896.1 mouse_genomes_project 14 2089540 3422410 - Fhit protein_coding retained_intron MGP_LPJ_T0038190.1 MGP_LPJ_G0020896.1 mouse_genomes_project 14 2089647 3422794 - MGP_LPJ_P0038190 Fhit protein_coding protein_coding MGP_LPJ_T0038191.1 MGP_LPJ_G0020896.1 mouse_genomes_project 14 2190112 3460871 - MGP_LPJ_P0038191 Fhit protein_coding protein_coding MGP_LPJ_T0039384.1 MGP_LPJ_G0021252.1 mouse_genomes_project 14 50619739 50629384 + MGP_LPJ_P0039384 Pck2 protein_coding protein_coding MGP_LPJ_T0003560.1 MGP_LPJ_G0003236.1 mouse_genomes_project 14 38883412 38916916 - Gm17173 antisense antisense MGP_LPJ_T0003563.1 MGP_LPJ_G0003239.1 mouse_genomes_project 14 41094854 41116642 - Gm10371 antisense antisense MGP_LPJ_T0039354.1 MGP_LPJ_G0021245.1 mouse_genomes_project 14 50150031 50157988 - MGP_LPJ_P0039354 Ap1g2 protein_coding nonsense_mediated_decay MGP_LPJ_T0039355.1 MGP_LPJ_G0021245.1 mouse_genomes_project 14 50150303 50150842 - Ap1g2 protein_coding retained_intron MGP_LPJ_T0039356.1 MGP_LPJ_G0021245.1 mouse_genomes_project 14 50150303 50157721 - MGP_LPJ_P0039356 Ap1g2 protein_coding nonsense_mediated_decay MGP_LPJ_T0039357.1 MGP_LPJ_G0021245.1 mouse_genomes_project 14 50150303 50158002 - MGP_LPJ_P0039357 Ap1g2 protein_coding nonsense_mediated_decay MGP_LPJ_T0039358.1 MGP_LPJ_G0021245.1 mouse_genomes_project 14 50150303 50158047 - MGP_LPJ_P0039358 Ap1g2 protein_coding protein_coding MGP_LPJ_T0039359.1 MGP_LPJ_G0021245.1 mouse_genomes_project 14 50150308 50157601 - MGP_LPJ_P0039359 Ap1g2 protein_coding protein_coding MGP_LPJ_T0039360.1 MGP_LPJ_G0021245.1 mouse_genomes_project 14 50150507 50157586 - Ap1g2 protein_coding processed_transcript MGP_LPJ_T0039361.1 MGP_LPJ_G0021245.1 mouse_genomes_project 14 50151888 50152241 - Ap1g2 protein_coding retained_intron MGP_LPJ_T0039362.1 MGP_LPJ_G0021245.1 mouse_genomes_project 14 50153803 50155964 - Ap1g2 protein_coding retained_intron MGP_LPJ_T0039363.1 MGP_LPJ_G0021245.1 mouse_genomes_project 14 50154086 50156345 - Ap1g2 protein_coding retained_intron MGP_LPJ_T0039364.1 MGP_LPJ_G0021245.1 mouse_genomes_project 14 50157159 50158015 - Ap1g2 protein_coding retained_intron MGP_LPJ_T0039365.1 MGP_LPJ_G0021245.1 mouse_genomes_project 14 50157378 50157962 - Ap1g2 protein_coding processed_transcript MGP_LPJ_T0039886.1 MGP_LPJ_G0021439.1 mouse_genomes_project 14 66259280 66321016 - MGP_LPJ_P0039886 Piwil2 protein_coding protein_coding MGP_LPJ_T0002672.1 MGP_LPJ_G0002559.1 mouse_genomes_project 14 48476224 48476824 + MGP_LPJ_P0002672 TR_V_gene TR_V_gene MGP_LPJ_T0012968.1 MGP_LPJ_G0011059.1 mouse_genomes_project 14 11838444 11838973 - processed_pseudogene processed_pseudogene MGP_LPJ_T0038298.1 MGP_LPJ_G0020934.1 mouse_genomes_project 14 13353458 13359745 - MGP_LPJ_P0038298 Dnajc9 protein_coding protein_coding MGP_LPJ_T0003569.1 MGP_LPJ_G0003244.1 mouse_genomes_project 14 50018213 50020148 + Mhrt antisense antisense MGP_LPJ_T0003570.1 MGP_LPJ_G0003244.1 mouse_genomes_project 14 50018322 50024923 + Mhrt antisense antisense MGP_LPJ_T0038497.1 MGP_LPJ_G0020984.1 mouse_genomes_project 14 20543182 20725022 + MGP_LPJ_P0038497 Arhgef3 protein_coding protein_coding MGP_LPJ_T0038498.1 MGP_LPJ_G0020984.1 mouse_genomes_project 14 20647811 20725037 + MGP_LPJ_P0038498 Arhgef3 protein_coding unknown_likely_coding MGP_LPJ_T0040060.1 MGP_LPJ_G0021504.1 mouse_genomes_project 14 75874245 75898648 - MGP_LPJ_P0040060 Lect1 protein_coding protein_coding MGP_LPJ_T0040061.1 MGP_LPJ_G0021504.1 mouse_genomes_project 14 75874248 75898734 - MGP_LPJ_P0040061 Lect1 protein_coding protein_coding MGP_LPJ_T0040062.1 MGP_LPJ_G0021504.1 mouse_genomes_project 14 75874371 75878751 - Lect1 protein_coding retained_intron MGP_LPJ_T0040063.1 MGP_LPJ_G0021504.1 mouse_genomes_project 14 75878032 75882066 - Lect1 protein_coding processed_transcript MGP_LPJ_T0040064.1 MGP_LPJ_G0021504.1 mouse_genomes_project 14 75878542 75882214 - Lect1 protein_coding retained_intron MGP_LPJ_T0039028.1 MGP_LPJ_G0021144.1 mouse_genomes_project 14 44621428 44622471 + MGP_LPJ_P0039028 protein_coding protein_coding MGP_LPJ_T0038262.1 MGP_LPJ_G0020922.1 mouse_genomes_project 14 10960545 11013210 - MGP_LPJ_P0038262 Ube2e1 protein_coding protein_coding MGP_LPJ_T0038263.1 MGP_LPJ_G0020922.1 mouse_genomes_project 14 10963714 11012385 - Ube2e1 protein_coding retained_intron MGP_LPJ_T0038264.1 MGP_LPJ_G0020922.1 mouse_genomes_project 14 10964014 11008712 - Ube2e1 protein_coding processed_transcript MGP_LPJ_T0038265.1 MGP_LPJ_G0020922.1 mouse_genomes_project 14 11005169 11012448 - Ube2e1 protein_coding retained_intron MGP_LPJ_T0039045.1 MGP_LPJ_G0021159.1 mouse_genomes_project 14 45129579 45131094 - MGP_LPJ_P0039045 A930018M24Rik protein_coding protein_coding MGP_LPJ_T0040263.1 MGP_LPJ_G0021579.1 mouse_genomes_project 14 121743103 121809321 - MGP_LPJ_P0040263 Tmtc4 protein_coding protein_coding MGP_LPJ_T0040264.1 MGP_LPJ_G0021579.1 mouse_genomes_project 14 121743110 121809255 - MGP_LPJ_P0040264 Tmtc4 protein_coding nonsense_mediated_decay MGP_LPJ_T0040265.1 MGP_LPJ_G0021579.1 mouse_genomes_project 14 121743863 121809180 - MGP_LPJ_P0040265 Tmtc4 protein_coding protein_coding MGP_LPJ_T0040266.1 MGP_LPJ_G0021579.1 mouse_genomes_project 14 121743892 121809180 - MGP_LPJ_P0040266 Tmtc4 protein_coding protein_coding MGP_LPJ_T0040267.1 MGP_LPJ_G0021579.1 mouse_genomes_project 14 121744038 121759974 - Tmtc4 protein_coding processed_transcript MGP_LPJ_T0040268.1 MGP_LPJ_G0021579.1 mouse_genomes_project 14 121748938 121753076 - Tmtc4 protein_coding retained_intron MGP_LPJ_T0040269.1 MGP_LPJ_G0021579.1 mouse_genomes_project 14 121756427 121809278 - Tmtc4 protein_coding retained_intron MGP_LPJ_T0040270.1 MGP_LPJ_G0021579.1 mouse_genomes_project 14 121768689 121809313 - MGP_LPJ_P0040270 Tmtc4 protein_coding nonsense_mediated_decay MGP_LPJ_T0040271.1 MGP_LPJ_G0021579.1 mouse_genomes_project 14 121798860 121809207 - Tmtc4 protein_coding processed_transcript MGP_LPJ_T0040118.1 MGP_LPJ_G0021526.1 mouse_genomes_project 14 98968418 98968853 - MGP_LPJ_P0040118 Gm9922 protein_coding protein_coding MGP_LPJ_T0101872.1 MGP_LPJ_G0039909.1 mouse_genomes_project 14 29815083 29816549 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0012970.1 MGP_LPJ_G0011061.1 mouse_genomes_project 14 13356197 13356321 - processed_pseudogene processed_pseudogene MGP_LPJ_T0039795.1 MGP_LPJ_G0021404.1 mouse_genomes_project 14 62523850 62533089 + MGP_LPJ_P0039795 Gm10032 protein_coding protein_coding MGP_LPJ_T0040082.1 MGP_LPJ_G0021512.1 mouse_genomes_project 14 89756766 90699909 - MGP_LPJ_P0040082 Pcdh9 protein_coding protein_coding MGP_LPJ_T0040083.1 MGP_LPJ_G0021512.1 mouse_genomes_project 14 89757058 90699909 - MGP_LPJ_P0040083 Pcdh9 protein_coding protein_coding MGP_LPJ_T0040084.1 MGP_LPJ_G0021512.1 mouse_genomes_project 14 89757331 90699869 - MGP_LPJ_P0040084 Pcdh9 protein_coding protein_coding MGP_LPJ_T0040085.1 MGP_LPJ_G0021512.1 mouse_genomes_project 14 89757555 90699399 - MGP_LPJ_P0040085 Pcdh9 protein_coding protein_coding MGP_LPJ_T0040086.1 MGP_LPJ_G0021512.1 mouse_genomes_project 14 89758868 90697972 - MGP_LPJ_P0040086 Pcdh9 protein_coding protein_coding MGP_LPJ_T0040087.1 MGP_LPJ_G0021512.1 mouse_genomes_project 14 89924188 90694988 - MGP_LPJ_P0040087 Pcdh9 protein_coding protein_coding MGP_LPJ_T0040088.1 MGP_LPJ_G0021512.1 mouse_genomes_project 14 90694808 90695464 - Pcdh9 protein_coding retained_intron MGP_LPJ_T0040089.1 MGP_LPJ_G0021512.1 mouse_genomes_project 14 90695352 90699919 - MGP_LPJ_P0040089 Pcdh9 protein_coding protein_coding MGP_LPJ_T0040003.1 MGP_LPJ_G0021479.1 mouse_genomes_project 14 71933373 72052202 - MGP_LPJ_P0040003 Gtf2f2 protein_coding protein_coding MGP_LPJ_T0039966.1 MGP_LPJ_G0021465.1 mouse_genomes_project 14 70590503 70659758 + MGP_LPJ_P0039966 Htr2a protein_coding protein_coding MGP_LPJ_T0038300.1 MGP_LPJ_G0020936.1 mouse_genomes_project 14 13365024 13431657 - MGP_LPJ_P0038300 Cfap70 protein_coding protein_coding MGP_LPJ_T0038301.1 MGP_LPJ_G0020936.1 mouse_genomes_project 14 13365024 13431657 - MGP_LPJ_P0038301 Cfap70 protein_coding protein_coding MGP_LPJ_T0038302.1 MGP_LPJ_G0020936.1 mouse_genomes_project 14 13365024 13431657 - MGP_LPJ_P0038302 Cfap70 protein_coding protein_coding MGP_LPJ_T0038303.1 MGP_LPJ_G0020936.1 mouse_genomes_project 14 13365027 13431654 - MGP_LPJ_P0038303 Cfap70 protein_coding protein_coding MGP_LPJ_T0038304.1 MGP_LPJ_G0020936.1 mouse_genomes_project 14 13397943 13431658 - Cfap70 protein_coding retained_intron MGP_LPJ_T0038305.1 MGP_LPJ_G0020936.1 mouse_genomes_project 14 13398451 13408368 - Cfap70 protein_coding processed_transcript MGP_LPJ_T0038306.1 MGP_LPJ_G0020936.1 mouse_genomes_project 14 13418061 13431655 - MGP_LPJ_P0038306 Cfap70 protein_coding protein_coding MGP_LPJ_T0038307.1 MGP_LPJ_G0020936.1 mouse_genomes_project 14 13425766 13428145 - Cfap70 protein_coding retained_intron MGP_LPJ_T0003542.1 MGP_LPJ_G0003221.1 mouse_genomes_project 14 13633670 13636713 + 2810402E24Rik antisense antisense MGP_LPJ_T0009992.1 MGP_LPJ_G0008110.1 mouse_genomes_project 14 19042653 19042763 - Gm23701 miRNA miRNA MGP_LPJ_T0006667.1 MGP_LPJ_G0005521.1 mouse_genomes_project 14 999736 1006686 + 4930455B14Rik lincRNA lincRNA MGP_LPJ_T0006668.1 MGP_LPJ_G0005521.1 mouse_genomes_project 14 999736 1006744 + 4930455B14Rik lincRNA lincRNA MGP_LPJ_T0039154.1 MGP_LPJ_G0021195.1 mouse_genomes_project 14 46736875 46788855 + MGP_LPJ_P0039154 Rpgrip1 protein_coding protein_coding MGP_LPJ_T0039155.1 MGP_LPJ_G0021195.1 mouse_genomes_project 14 46737075 46787992 + MGP_LPJ_P0039155 Rpgrip1 protein_coding nonsense_mediated_decay MGP_LPJ_T0039156.1 MGP_LPJ_G0021195.1 mouse_genomes_project 14 46737094 46746897 + Rpgrip1 protein_coding retained_intron MGP_LPJ_T0039157.1 MGP_LPJ_G0021195.1 mouse_genomes_project 14 46737101 46786974 + Rpgrip1 protein_coding retained_intron MGP_LPJ_T0039158.1 MGP_LPJ_G0021195.1 mouse_genomes_project 14 46737111 46788887 + MGP_LPJ_P0039158 Rpgrip1 protein_coding protein_coding MGP_LPJ_T0039159.1 MGP_LPJ_G0021195.1 mouse_genomes_project 14 46738362 46787764 + MGP_LPJ_P0039159 Rpgrip1 protein_coding protein_coding MGP_LPJ_T0039160.1 MGP_LPJ_G0021195.1 mouse_genomes_project 14 46740757 46761693 + Rpgrip1 protein_coding retained_intron MGP_LPJ_T0039161.1 MGP_LPJ_G0021195.1 mouse_genomes_project 14 46744978 46745560 + Rpgrip1 protein_coding retained_intron MGP_LPJ_T0039162.1 MGP_LPJ_G0021195.1 mouse_genomes_project 14 46747119 46767419 + MGP_LPJ_P0039162 Rpgrip1 protein_coding nonsense_mediated_decay MGP_LPJ_T0039163.1 MGP_LPJ_G0021195.1 mouse_genomes_project 14 46763362 46776136 + Rpgrip1 protein_coding retained_intron MGP_LPJ_T0039164.1 MGP_LPJ_G0021195.1 mouse_genomes_project 14 46763407 46788886 + Rpgrip1 protein_coding retained_intron MGP_LPJ_T0039165.1 MGP_LPJ_G0021195.1 mouse_genomes_project 14 46772183 46776038 + MGP_LPJ_P0039165 Rpgrip1 protein_coding protein_coding MGP_LPJ_T0039166.1 MGP_LPJ_G0021195.1 mouse_genomes_project 14 46772243 46777252 + MGP_LPJ_P0039166 Rpgrip1 protein_coding nonsense_mediated_decay MGP_LPJ_T0039167.1 MGP_LPJ_G0021195.1 mouse_genomes_project 14 46773822 46776228 + Rpgrip1 protein_coding retained_intron MGP_LPJ_T0039168.1 MGP_LPJ_G0021195.1 mouse_genomes_project 14 46776249 46787842 + MGP_LPJ_P0039168 Rpgrip1 protein_coding protein_coding MGP_LPJ_T0039169.1 MGP_LPJ_G0021195.1 mouse_genomes_project 14 46776332 46777472 + Rpgrip1 protein_coding retained_intron MGP_LPJ_T0039170.1 MGP_LPJ_G0021195.1 mouse_genomes_project 14 46777198 46787686 + MGP_LPJ_P0039170 Rpgrip1 protein_coding protein_coding MGP_LPJ_T0039171.1 MGP_LPJ_G0021195.1 mouse_genomes_project 14 46778790 46782798 + Rpgrip1 protein_coding retained_intron MGP_LPJ_T0039172.1 MGP_LPJ_G0021195.1 mouse_genomes_project 14 46785999 46791095 + MGP_LPJ_P0039172 Rpgrip1 protein_coding nonsense_mediated_decay MGP_LPJ_T0039629.1 MGP_LPJ_G0021339.1 mouse_genomes_project 14 56021121 56081785 + MGP_LPJ_P0039629 Spata13 protein_coding protein_coding MGP_LPJ_T0039630.1 MGP_LPJ_G0021339.1 mouse_genomes_project 14 56021854 56081826 + MGP_LPJ_P0039630 Spata13 protein_coding protein_coding MGP_LPJ_T0039631.1 MGP_LPJ_G0021339.1 mouse_genomes_project 14 56021875 56081311 + Spata13 protein_coding processed_transcript MGP_LPJ_T0039632.1 MGP_LPJ_G0021339.1 mouse_genomes_project 14 56081238 56157549 + MGP_LPJ_P0039632 Spata13 protein_coding protein_coding MGP_LPJ_T0039633.1 MGP_LPJ_G0021339.1 mouse_genomes_project 14 56082392 56101444 + MGP_LPJ_P0039633 Spata13 protein_coding protein_coding MGP_LPJ_T0039634.1 MGP_LPJ_G0021339.1 mouse_genomes_project 14 56094827 56098749 + Spata13 protein_coding processed_transcript MGP_LPJ_T0039635.1 MGP_LPJ_G0021339.1 mouse_genomes_project 14 56098607 56146514 + MGP_LPJ_P0039635 Spata13 protein_coding protein_coding MGP_LPJ_T0039636.1 MGP_LPJ_G0021339.1 mouse_genomes_project 14 56128002 56161047 + MGP_LPJ_P0039636 Spata13 protein_coding protein_coding MGP_LPJ_T0039637.1 MGP_LPJ_G0021339.1 mouse_genomes_project 14 56147574 56159164 + Spata13 protein_coding retained_intron MGP_LPJ_T0006674.1 MGP_LPJ_G0005524.1 mouse_genomes_project 14 13680919 13697564 - 6230400D17Rik lincRNA lincRNA MGP_LPJ_T0038861.1 MGP_LPJ_G0021091.1 mouse_genomes_project 14 35020761 35028119 + MGP_LPJ_P0038861 Mbl1 protein_coding protein_coding MGP_LPJ_T0003580.1 MGP_LPJ_G0003252.1 mouse_genomes_project 14 56175178 56184741 - Mipepos antisense antisense MGP_LPJ_T0038822.1 MGP_LPJ_G0021076.1 mouse_genomes_project 14 30658184 30759010 - MGP_LPJ_P0038822 Ccser2 protein_coding protein_coding MGP_LPJ_T0038823.1 MGP_LPJ_G0021076.1 mouse_genomes_project 14 30658184 30758920 - MGP_LPJ_P0038823 Ccser2 protein_coding protein_coding MGP_LPJ_T0038824.1 MGP_LPJ_G0021076.1 mouse_genomes_project 14 30662088 30689583 - Ccser2 protein_coding processed_transcript MGP_LPJ_T0038825.1 MGP_LPJ_G0021076.1 mouse_genomes_project 14 30662089 30722434 - MGP_LPJ_P0038825 Ccser2 protein_coding protein_coding MGP_LPJ_T0038826.1 MGP_LPJ_G0021076.1 mouse_genomes_project 14 30662344 30692325 - MGP_LPJ_P0038826 Ccser2 protein_coding protein_coding MGP_LPJ_T0038827.1 MGP_LPJ_G0021076.1 mouse_genomes_project 14 30662391 30702279 - MGP_LPJ_P0038827 Ccser2 protein_coding protein_coding MGP_LPJ_T0038828.1 MGP_LPJ_G0021076.1 mouse_genomes_project 14 30662607 30702481 - MGP_LPJ_P0038828 Ccser2 protein_coding protein_coding MGP_LPJ_T0038829.1 MGP_LPJ_G0021076.1 mouse_genomes_project 14 30662766 30712457 - MGP_LPJ_P0038829 Ccser2 protein_coding protein_coding MGP_LPJ_T0038830.1 MGP_LPJ_G0021076.1 mouse_genomes_project 14 30662818 30669553 - Ccser2 protein_coding retained_intron MGP_LPJ_T0038831.1 MGP_LPJ_G0021076.1 mouse_genomes_project 14 30684206 30726817 - Ccser2 protein_coding processed_transcript MGP_LPJ_T0003557.1 MGP_LPJ_G0003233.1 mouse_genomes_project 14 32311184 32321226 + Gm20641 antisense antisense MGP_LPJ_T0039720.1 MGP_LPJ_G0021378.1 mouse_genomes_project 14 59702440 59712904 + MGP_LPJ_P0039720 Prss52 protein_coding protein_coding MGP_LPJ_T0038655.1 MGP_LPJ_G0021020.1 mouse_genomes_project 14 24842881 24877851 + MGP_LPJ_P0038655 Capn7 protein_coding protein_coding MGP_LPJ_T0038656.1 MGP_LPJ_G0021020.1 mouse_genomes_project 14 24842918 24877853 + MGP_LPJ_P0038656 Capn7 protein_coding nonsense_mediated_decay MGP_LPJ_T0038657.1 MGP_LPJ_G0021020.1 mouse_genomes_project 14 24842950 24877851 + MGP_LPJ_P0038657 Capn7 protein_coding nonsense_mediated_decay MGP_LPJ_T0101881.1 MGP_LPJ_G0039918.1 mouse_genomes_project 14 45635945 45636397 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0003562.1 MGP_LPJ_G0003238.1 mouse_genomes_project 14 40338478 40340243 + Gm15222 antisense antisense MGP_LPJ_T0040199.1 MGP_LPJ_G0021555.1 mouse_genomes_project 14 117527130 117577389 - MGP_LPJ_P0040199 Dzip1 protein_coding protein_coding MGP_LPJ_T0040200.1 MGP_LPJ_G0021555.1 mouse_genomes_project 14 117527718 117579536 - MGP_LPJ_P0040200 Dzip1 protein_coding protein_coding MGP_LPJ_T0040023.1 MGP_LPJ_G0021484.1 mouse_genomes_project 14 72595726 72619671 - MGP_LPJ_P0040023 Serp2 protein_coding protein_coding MGP_LPJ_T0038211.1 MGP_LPJ_G0020903.1 mouse_genomes_project 14 6330744 6447050 - MGP_LPJ_P0038211 Gm281 protein_coding protein_coding MGP_LPJ_T0010003.1 MGP_LPJ_G0008121.1 mouse_genomes_project 14 49612637 49612699 - Mir6948 miRNA miRNA MGP_LPJ_T0006729.1 MGP_LPJ_G0005563.1 mouse_genomes_project 14 58258948 58328665 + 4931440J10Rik lincRNA lincRNA MGP_LPJ_T0000955.1 MGP_LPJ_G0000883.1 mouse_genomes_project 14 83699192 83699565 - TEC TEC MGP_LPJ_T0010037.1 MGP_LPJ_G0008155.1 mouse_genomes_project 14 116540993 116541098 - Mir6239 miRNA miRNA MGP_LPJ_T0002573.1 MGP_LPJ_G0002472.1 mouse_genomes_project 14 49163885 49163945 + MGP_LPJ_P0002573 Traj15 TR_J_gene TR_J_gene MGP_LPJ_T0002752.1 MGP_LPJ_G0002624.1 mouse_genomes_project 14 48950790 48951093 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0012967.1 MGP_LPJ_G0011058.1 mouse_genomes_project 14 11838442 11838900 - processed_pseudogene processed_pseudogene MGP_LPJ_T0039538.1 MGP_LPJ_G0021306.1 mouse_genomes_project 14 52202036 52208226 + MGP_LPJ_P0039538 B020004C17Rik protein_coding protein_coding MGP_LPJ_T0039573.1 MGP_LPJ_G0021317.1 mouse_genomes_project 14 53050581 53057889 + MGP_LPJ_P0039573 Sap18 protein_coding protein_coding MGP_LPJ_T0039574.1 MGP_LPJ_G0021317.1 mouse_genomes_project 14 53050619 53057878 + MGP_LPJ_P0039574 Sap18 protein_coding protein_coding MGP_LPJ_T0039575.1 MGP_LPJ_G0021317.1 mouse_genomes_project 14 53050665 53051251 + Sap18 protein_coding retained_intron MGP_LPJ_T0039576.1 MGP_LPJ_G0021317.1 mouse_genomes_project 14 53050684 53054987 + MGP_LPJ_P0039576 Sap18 protein_coding protein_coding MGP_LPJ_T0038201.1 MGP_LPJ_G0020900.1 mouse_genomes_project 14 4751064 5241181 - MGP_LPJ_P0038201 Cadps protein_coding protein_coding MGP_LPJ_T0038202.1 MGP_LPJ_G0020900.1 mouse_genomes_project 14 4751066 5241181 - MGP_LPJ_P0038202 Cadps protein_coding protein_coding MGP_LPJ_T0038203.1 MGP_LPJ_G0020900.1 mouse_genomes_project 14 4751066 5241181 - MGP_LPJ_P0038203 Cadps protein_coding protein_coding MGP_LPJ_T0038204.1 MGP_LPJ_G0020900.1 mouse_genomes_project 14 4751066 5241181 - MGP_LPJ_P0038204 Cadps protein_coding protein_coding MGP_LPJ_T0002622.1 MGP_LPJ_G0002515.1 mouse_genomes_project 14 47253801 47262046 + MGP_LPJ_P0002622 Trav3-1 TR_V_gene TR_V_gene MGP_LPJ_T0039967.1 MGP_LPJ_G0021466.1 mouse_genomes_project 14 70684972 70706478 + MGP_LPJ_P0039967 Esd protein_coding protein_coding MGP_LPJ_T0039968.1 MGP_LPJ_G0021466.1 mouse_genomes_project 14 70684994 70695286 + Esd protein_coding retained_intron MGP_LPJ_T0039969.1 MGP_LPJ_G0021466.1 mouse_genomes_project 14 70684996 70692144 + Esd protein_coding processed_transcript MGP_LPJ_T0039970.1 MGP_LPJ_G0021466.1 mouse_genomes_project 14 70685032 70700854 + MGP_LPJ_P0039970 Esd protein_coding protein_coding MGP_LPJ_T0039971.1 MGP_LPJ_G0021466.1 mouse_genomes_project 14 70685059 70705561 + MGP_LPJ_P0039971 Esd protein_coding protein_coding MGP_LPJ_T0039972.1 MGP_LPJ_G0021466.1 mouse_genomes_project 14 70688344 70701102 + MGP_LPJ_P0039972 Esd protein_coding protein_coding MGP_LPJ_T0039973.1 MGP_LPJ_G0021466.1 mouse_genomes_project 14 70691131 70696236 + Esd protein_coding retained_intron MGP_LPJ_T0039974.1 MGP_LPJ_G0021466.1 mouse_genomes_project 14 70691194 70705468 + MGP_LPJ_P0039974 Esd protein_coding protein_coding MGP_LPJ_T0039660.1 MGP_LPJ_G0021352.1 mouse_genomes_project 14 57768312 57830968 + MGP_LPJ_P0039660 Rnaseh2b protein_coding protein_coding MGP_LPJ_T0039661.1 MGP_LPJ_G0021352.1 mouse_genomes_project 14 57809491 57850551 + MGP_LPJ_P0039661 Rnaseh2b protein_coding protein_coding MGP_LPJ_T0039662.1 MGP_LPJ_G0021352.1 mouse_genomes_project 14 57809548 57841659 + MGP_LPJ_P0039662 Rnaseh2b protein_coding nonsense_mediated_decay MGP_LPJ_T0039663.1 MGP_LPJ_G0021352.1 mouse_genomes_project 14 57824714 57832737 + Rnaseh2b protein_coding retained_intron MGP_LPJ_T0002516.1 MGP_LPJ_G0002422.1 mouse_genomes_project 14 49180063 49182750 + MGP_LPJ_P0002516 Trac TR_C_gene TR_C_gene MGP_LPJ_T0002517.1 MGP_LPJ_G0002422.1 mouse_genomes_project 14 49180063 49183835 + MGP_LPJ_P0002517 Trac TR_C_gene TR_C_gene MGP_LPJ_T0039648.1 MGP_LPJ_G0021344.1 mouse_genomes_project 14 56628798 56667085 - MGP_LPJ_P0039648 Sgcg protein_coding protein_coding MGP_LPJ_T0039649.1 MGP_LPJ_G0021344.1 mouse_genomes_project 14 56629183 56667019 - MGP_LPJ_P0039649 Sgcg protein_coding protein_coding MGP_LPJ_T0039650.1 MGP_LPJ_G0021344.1 mouse_genomes_project 14 56630555 56640177 - MGP_LPJ_P0039650 Sgcg protein_coding protein_coding MGP_LPJ_T0039717.1 MGP_LPJ_G0021377.1 mouse_genomes_project 14 59684491 59695818 + MGP_LPJ_P0039717 Prss51 protein_coding protein_coding MGP_LPJ_T0039718.1 MGP_LPJ_G0021377.1 mouse_genomes_project 14 59691863 59695814 + MGP_LPJ_P0039718 Prss51 protein_coding protein_coding MGP_LPJ_T0039719.1 MGP_LPJ_G0021377.1 mouse_genomes_project 14 59691893 59695256 + MGP_LPJ_P0039719 Prss51 protein_coding protein_coding MGP_LPJ_T0013037.1 MGP_LPJ_G0011128.1 mouse_genomes_project 14 111904652 111905094 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100362.1 MGP_LPJ_G0038625.1 mouse_genomes_project 14 117418750 117418881 + Gm22379 snoRNA snoRNA MGP_LPJ_T0099058.1 MGP_LPJ_G0037321.1 mouse_genomes_project 14 42893153 42893258 - Gm22699 snRNA snRNA MGP_LPJ_T0039837.1 MGP_LPJ_G0021421.1 mouse_genomes_project 14 65007023 65010784 + MGP_LPJ_P0039837 Nkx2-6 protein_coding protein_coding MGP_LPJ_T0006747.1 MGP_LPJ_G0005575.1 mouse_genomes_project 14 113524610 113528459 + Mir17hg lincRNA lincRNA MGP_LPJ_T0100332.1 MGP_LPJ_G0038595.1 mouse_genomes_project 14 62731368 62731501 + Gm24258 snoRNA snoRNA MGP_LPJ_T0038773.1 MGP_LPJ_G0021050.1 mouse_genomes_project 14 27117650 27199944 + MGP_LPJ_P0038773 unknown_likely_coding unknown_likely_coding MGP_LPJ_T0000960.1 MGP_LPJ_G0000888.1 mouse_genomes_project 14 113299896 113300160 - TEC TEC MGP_LPJ_T0040057.1 MGP_LPJ_G0021502.1 mouse_genomes_project 14 75706390 75814153 + MGP_LPJ_P0040057 Elf1 protein_coding protein_coding MGP_LPJ_T0040058.1 MGP_LPJ_G0021502.1 mouse_genomes_project 14 75744116 75814152 + MGP_LPJ_P0040058 Elf1 protein_coding protein_coding MGP_LPJ_T0040144.1 MGP_LPJ_G0021532.1 mouse_genomes_project 14 100427198 100484771 - MGP_LPJ_P0040144 Mycbp2 protein_coding protein_coding MGP_LPJ_T0040145.1 MGP_LPJ_G0021532.1 mouse_genomes_project 14 100427198 100671811 - MGP_LPJ_P0040145 Mycbp2 protein_coding protein_coding MGP_LPJ_T0040146.1 MGP_LPJ_G0021532.1 mouse_genomes_project 14 100427198 100671432 - MGP_LPJ_P0040146 Mycbp2 protein_coding protein_coding MGP_LPJ_T0040147.1 MGP_LPJ_G0021532.1 mouse_genomes_project 14 100427907 100671531 - MGP_LPJ_P0040147 Mycbp2 protein_coding unknown_likely_coding MGP_LPJ_T0040148.1 MGP_LPJ_G0021532.1 mouse_genomes_project 14 100427920 100429191 - Mycbp2 protein_coding processed_transcript MGP_LPJ_T0040149.1 MGP_LPJ_G0021532.1 mouse_genomes_project 14 100460677 100481510 - Mycbp2 protein_coding retained_intron MGP_LPJ_T0040150.1 MGP_LPJ_G0021532.1 mouse_genomes_project 14 100484820 100520926 - MGP_LPJ_P0040150 Mycbp2 protein_coding protein_coding MGP_LPJ_T0040151.1 MGP_LPJ_G0021532.1 mouse_genomes_project 14 100640500 100671825 - Mycbp2 protein_coding retained_intron MGP_LPJ_T0013010.1 MGP_LPJ_G0011101.1 mouse_genomes_project 14 53371595 53371953 - processed_pseudogene processed_pseudogene MGP_LPJ_T0002546.1 MGP_LPJ_G0002445.1 mouse_genomes_project 14 49128226 49128283 + MGP_LPJ_P0002546 Traj43 TR_J_gene TR_J_gene MGP_LPJ_T0038249.1 MGP_LPJ_G0020918.1 mouse_genomes_project 14 10302913 10698904 + MGP_LPJ_P0038249 Thrb protein_coding protein_coding MGP_LPJ_T0038250.1 MGP_LPJ_G0020918.1 mouse_genomes_project 14 10302913 10700451 + MGP_LPJ_P0038250 Thrb protein_coding protein_coding MGP_LPJ_T0038251.1 MGP_LPJ_G0020918.1 mouse_genomes_project 14 10645144 10700449 + MGP_LPJ_P0038251 Thrb protein_coding protein_coding MGP_LPJ_T0039926.1 MGP_LPJ_G0021456.1 mouse_genomes_project 14 68942694 68962755 - MGP_LPJ_P0039926 Cysltr2 protein_coding protein_coding MGP_LPJ_T0039927.1 MGP_LPJ_G0021456.1 mouse_genomes_project 14 68942694 68962755 - MGP_LPJ_P0039927 Cysltr2 protein_coding protein_coding MGP_LPJ_T0012957.1 MGP_LPJ_G0011048.1 mouse_genomes_project 14 99187 100010 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006745.1 MGP_LPJ_G0005574.1 mouse_genomes_project 14 103849732 103922592 - 1700128A07Rik lincRNA lincRNA MGP_LPJ_T0006746.1 MGP_LPJ_G0005574.1 mouse_genomes_project 14 103875763 103922564 - 1700128A07Rik lincRNA lincRNA MGP_LPJ_T0039002.1 MGP_LPJ_G0021126.1 mouse_genomes_project 14 43466962 43696869 - MGP_LPJ_P0039002 Slc35f4 protein_coding protein_coding MGP_LPJ_T0039003.1 MGP_LPJ_G0021126.1 mouse_genomes_project 14 43471583 43482487 - Slc35f4 protein_coding processed_transcript MGP_LPJ_T0039004.1 MGP_LPJ_G0021126.1 mouse_genomes_project 14 43480368 43697302 - MGP_LPJ_P0039004 Slc35f4 protein_coding protein_coding MGP_LPJ_T0039005.1 MGP_LPJ_G0021126.1 mouse_genomes_project 14 43485332 43697109 - Slc35f4 protein_coding retained_intron MGP_LPJ_T0012971.1 MGP_LPJ_G0011062.1 mouse_genomes_project 14 15644681 15645053 - processed_pseudogene processed_pseudogene MGP_LPJ_T0038290.1 MGP_LPJ_G0020929.1 mouse_genomes_project 14 13100224 13142192 - MGP_LPJ_P0038290 Kcnk5 protein_coding protein_coding MGP_LPJ_T0039546.1 MGP_LPJ_G0021312.1 mouse_genomes_project 14 52651956 52751712 + MGP_LPJ_P0039546 Ift88 protein_coding protein_coding MGP_LPJ_T0039547.1 MGP_LPJ_G0021312.1 mouse_genomes_project 14 52651974 52670570 + MGP_LPJ_P0039547 Ift88 protein_coding nonsense_mediated_decay MGP_LPJ_T0039548.1 MGP_LPJ_G0021312.1 mouse_genomes_project 14 52652000 52751712 + Ift88 protein_coding retained_intron MGP_LPJ_T0039549.1 MGP_LPJ_G0021312.1 mouse_genomes_project 14 52675237 52710623 + MGP_LPJ_P0039549 Ift88 protein_coding nonsense_mediated_decay MGP_LPJ_T0039550.1 MGP_LPJ_G0021312.1 mouse_genomes_project 14 52712299 52720278 + Ift88 protein_coding retained_intron MGP_LPJ_T0000940.1 MGP_LPJ_G0000868.1 mouse_genomes_project 14 39977016 39998057 - TEC TEC MGP_LPJ_T0098166.1 MGP_LPJ_G0036447.1 mouse_genomes_project 14 71765758 71765850 - Gm24876 rRNA rRNA MGP_LPJ_T0039590.1 MGP_LPJ_G0021324.1 mouse_genomes_project 14 54460860 54480785 - MGP_LPJ_P0039590 Gm5142 protein_coding protein_coding MGP_LPJ_T0039266.1 MGP_LPJ_G0021215.1 mouse_genomes_project 14 49420422 49428155 + MGP_LPJ_P0039266 Lrp10 protein_coding protein_coding MGP_LPJ_T0009994.1 MGP_LPJ_G0008112.1 mouse_genomes_project 14 20701054 20701173 - Gm23633 miRNA miRNA MGP_LPJ_T0012988.1 MGP_LPJ_G0011079.1 mouse_genomes_project 14 44841504 44841787 - processed_pseudogene processed_pseudogene MGP_LPJ_T0040163.1 MGP_LPJ_G0021538.1 mouse_genomes_project 14 102498694 102527430 - MGP_LPJ_P0040163 Rbm26 protein_coding protein_coding MGP_LPJ_T0040164.1 MGP_LPJ_G0021538.1 mouse_genomes_project 14 102506906 102583886 - MGP_LPJ_P0040164 Rbm26 protein_coding protein_coding MGP_LPJ_T0040165.1 MGP_LPJ_G0021538.1 mouse_genomes_project 14 102506927 102584349 - MGP_LPJ_P0040165 Rbm26 protein_coding protein_coding MGP_LPJ_T0040166.1 MGP_LPJ_G0021538.1 mouse_genomes_project 14 102507004 102584353 - MGP_LPJ_P0040166 Rbm26 protein_coding protein_coding MGP_LPJ_T0040167.1 MGP_LPJ_G0021538.1 mouse_genomes_project 14 102508018 102584290 - MGP_LPJ_P0040167 Rbm26 protein_coding protein_coding MGP_LPJ_T0099060.1 MGP_LPJ_G0037323.1 mouse_genomes_project 14 43691296 43691437 - Gm22116 snRNA snRNA MGP_LPJ_T0038340.1 MGP_LPJ_G0020950.1 mouse_genomes_project 14 13938416 14047899 + MGP_LPJ_P0038340 Vcl protein_coding protein_coding MGP_LPJ_T0010016.1 MGP_LPJ_G0008134.1 mouse_genomes_project 14 62845034 62845152 + Gm27647 miRNA miRNA MGP_LPJ_T0038777.1 MGP_LPJ_G0021054.1 mouse_genomes_project 14 27623521 27633663 + MGP_LPJ_P0038777 Rbp3 protein_coding protein_coding MGP_LPJ_T0038443.1 MGP_LPJ_G0020967.1 mouse_genomes_project 14 18903668 18909981 + Ppif protein_coding retained_intron MGP_LPJ_T0038444.1 MGP_LPJ_G0020967.1 mouse_genomes_project 14 18903684 18909985 + MGP_LPJ_P0038444 Ppif protein_coding protein_coding MGP_LPJ_T0038923.1 MGP_LPJ_G0021112.1 mouse_genomes_project 14 41255216 41292825 - MGP_LPJ_P0038923 Wdhd1 protein_coding protein_coding MGP_LPJ_T0038924.1 MGP_LPJ_G0021112.1 mouse_genomes_project 14 41255216 41292783 - MGP_LPJ_P0038924 Wdhd1 protein_coding protein_coding MGP_LPJ_T0038925.1 MGP_LPJ_G0021112.1 mouse_genomes_project 14 41255217 41292850 - MGP_LPJ_P0038925 Wdhd1 protein_coding protein_coding MGP_LPJ_T0038926.1 MGP_LPJ_G0021112.1 mouse_genomes_project 14 41273955 41292825 - MGP_LPJ_P0038926 Wdhd1 protein_coding protein_coding MGP_LPJ_T0038927.1 MGP_LPJ_G0021112.1 mouse_genomes_project 14 41288470 41292800 - Wdhd1 protein_coding retained_intron MGP_LPJ_T0038393.1 MGP_LPJ_G0020958.1 mouse_genomes_project 14 14905010 14906773 - Comtd1 protein_coding retained_intron MGP_LPJ_T0038394.1 MGP_LPJ_G0020958.1 mouse_genomes_project 14 14905016 14905634 - Comtd1 protein_coding retained_intron MGP_LPJ_T0038395.1 MGP_LPJ_G0020958.1 mouse_genomes_project 14 14905106 14906751 - MGP_LPJ_P0038395 Comtd1 protein_coding protein_coding MGP_LPJ_T0013017.1 MGP_LPJ_G0011108.1 mouse_genomes_project 14 67733565 67734544 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100317.1 MGP_LPJ_G0038580.1 mouse_genomes_project 14 30378160 30378285 + Gm24394 snoRNA snoRNA MGP_LPJ_T0039552.1 MGP_LPJ_G0021314.1 mouse_genomes_project 14 52784670 52811258 - MGP_LPJ_P0039552 Eef1akmt1 protein_coding protein_coding MGP_LPJ_T0039652.1 MGP_LPJ_G0021346.1 mouse_genomes_project 14 56754828 56776532 - MGP_LPJ_P0039652 Ebpl protein_coding protein_coding MGP_LPJ_T0039990.1 MGP_LPJ_G0021471.1 mouse_genomes_project 14 71220567 71265823 + MGP_LPJ_P0039990 Cpb2 protein_coding protein_coding MGP_LPJ_T0039828.1 MGP_LPJ_G0021415.1 mouse_genomes_project 14 63898103 63945896 - MGP_LPJ_P0039828 Nefm protein_coding protein_coding MGP_LPJ_T0039830.1 MGP_LPJ_G0021415.1 mouse_genomes_project 14 63940321 63945896 - MGP_LPJ_P0039830 Nefm protein_coding protein_coding MGP_LPJ_T0099059.1 MGP_LPJ_G0037322.1 mouse_genomes_project 14 43146088 43146208 - Gm23470 snRNA snRNA MGP_LPJ_T0039067.1 MGP_LPJ_G0021163.1 mouse_genomes_project 14 45194054 45204999 + MGP_LPJ_P0039067 Pnp protein_coding protein_coding MGP_LPJ_T0039068.1 MGP_LPJ_G0021163.1 mouse_genomes_project 14 45194259 45203436 + MGP_LPJ_P0039068 Pnp protein_coding protein_coding MGP_LPJ_T0003571.1 MGP_LPJ_G0003245.1 mouse_genomes_project 14 50023601 50023932 + Gm29015 antisense antisense MGP_LPJ_T0100347.1 MGP_LPJ_G0038610.1 mouse_genomes_project 14 93534725 93534855 + Gm25133 snoRNA snoRNA MGP_LPJ_T0038866.1 MGP_LPJ_G0021096.1 mouse_genomes_project 14 39028349 39120743 - MGP_LPJ_P0038866 Txndc16 protein_coding protein_coding MGP_LPJ_T0038867.1 MGP_LPJ_G0021096.1 mouse_genomes_project 14 39028801 39120774 - MGP_LPJ_P0038867 Txndc16 protein_coding protein_coding MGP_LPJ_T0038868.1 MGP_LPJ_G0021096.1 mouse_genomes_project 14 39028812 39121677 - MGP_LPJ_P0038868 Txndc16 protein_coding protein_coding MGP_LPJ_T0038869.1 MGP_LPJ_G0021096.1 mouse_genomes_project 14 39058508 39063052 - Txndc16 protein_coding retained_intron MGP_LPJ_T0038870.1 MGP_LPJ_G0021096.1 mouse_genomes_project 14 39061043 39120739 - Txndc16 protein_coding retained_intron MGP_LPJ_T0038871.1 MGP_LPJ_G0021096.1 mouse_genomes_project 14 39061950 39120731 - Txndc16 protein_coding retained_intron MGP_LPJ_T0038872.1 MGP_LPJ_G0021096.1 mouse_genomes_project 14 39107999 39120746 - MGP_LPJ_P0038872 Txndc16 protein_coding protein_coding MGP_LPJ_T0038873.1 MGP_LPJ_G0021096.1 mouse_genomes_project 14 39109286 39120751 - Txndc16 protein_coding retained_intron MGP_LPJ_T0038874.1 MGP_LPJ_G0021096.1 mouse_genomes_project 14 39114599 39120713 - Txndc16 protein_coding processed_transcript MGP_LPJ_T0038875.1 MGP_LPJ_G0021096.1 mouse_genomes_project 14 39119241 39120739 - Txndc16 protein_coding processed_transcript MGP_LPJ_T0039770.1 MGP_LPJ_G0021399.1 mouse_genomes_project 14 61836772 61852898 + MGP_LPJ_P0039770 Chrna2 protein_coding protein_coding MGP_LPJ_T0039771.1 MGP_LPJ_G0021399.1 mouse_genomes_project 14 61842666 61854679 + MGP_LPJ_P0039771 Chrna2 protein_coding protein_coding MGP_LPJ_T0002638.1 MGP_LPJ_G0002527.1 mouse_genomes_project 14 47483347 47483896 + MGP_LPJ_P0002638 TR_V_gene TR_V_gene MGP_LPJ_T0039279.1 MGP_LPJ_G0021220.1 mouse_genomes_project 14 49549439 49572984 - MGP_LPJ_P0039279 4931414P19Rik protein_coding protein_coding MGP_LPJ_T0006678.1 MGP_LPJ_G0005527.1 mouse_genomes_project 14 17847036 17851132 + 4931403M11Rik lincRNA lincRNA MGP_LPJ_T0006692.1 MGP_LPJ_G0005535.1 mouse_genomes_project 14 25443610 25462987 + D830044D21Rik lincRNA lincRNA MGP_LPJ_T0039536.1 MGP_LPJ_G0021304.1 mouse_genomes_project 14 52067109 52143178 + MGP_LPJ_P0039536 Zmym2 protein_coding unknown_likely_coding MGP_LPJ_T0013032.1 MGP_LPJ_G0011123.1 mouse_genomes_project 14 96969329 96969626 - processed_pseudogene processed_pseudogene MGP_LPJ_T0040202.1 MGP_LPJ_G0021557.1 mouse_genomes_project 14 117640805 117662893 - Uggt2 protein_coding retained_intron MGP_LPJ_T0040203.1 MGP_LPJ_G0021557.1 mouse_genomes_project 14 117640805 117764952 - MGP_LPJ_P0040203 Uggt2 protein_coding protein_coding MGP_LPJ_T0040204.1 MGP_LPJ_G0021557.1 mouse_genomes_project 14 117641959 117662653 - Uggt2 protein_coding retained_intron MGP_LPJ_T0040205.1 MGP_LPJ_G0021557.1 mouse_genomes_project 14 117642184 117662174 - Uggt2 protein_coding processed_transcript MGP_LPJ_T0040206.1 MGP_LPJ_G0021557.1 mouse_genomes_project 14 117642581 117662827 - Uggt2 protein_coding retained_intron MGP_LPJ_T0040207.1 MGP_LPJ_G0021557.1 mouse_genomes_project 14 117654614 117664489 - Uggt2 protein_coding processed_transcript MGP_LPJ_T0040208.1 MGP_LPJ_G0021557.1 mouse_genomes_project 14 117658223 117663597 - Uggt2 protein_coding retained_intron MGP_LPJ_T0040209.1 MGP_LPJ_G0021557.1 mouse_genomes_project 14 117658389 117662984 - Uggt2 protein_coding processed_transcript MGP_LPJ_T0040210.1 MGP_LPJ_G0021557.1 mouse_genomes_project 14 117659334 117676126 - MGP_LPJ_P0040210 Uggt2 protein_coding protein_coding MGP_LPJ_T0040211.1 MGP_LPJ_G0021557.1 mouse_genomes_project 14 117669832 117715430 - MGP_LPJ_P0040211 Uggt2 protein_coding nonsense_mediated_decay MGP_LPJ_T0040212.1 MGP_LPJ_G0021557.1 mouse_genomes_project 14 117669832 117689469 - MGP_LPJ_P0040212 Uggt2 protein_coding nonsense_mediated_decay MGP_LPJ_T0040213.1 MGP_LPJ_G0021557.1 mouse_genomes_project 14 117689596 117693318 - Uggt2 protein_coding retained_intron MGP_LPJ_T0040214.1 MGP_LPJ_G0021557.1 mouse_genomes_project 14 117701495 117706901 - Uggt2 protein_coding retained_intron MGP_LPJ_T0040215.1 MGP_LPJ_G0021557.1 mouse_genomes_project 14 117717158 117764952 - Uggt2 protein_coding retained_intron MGP_LPJ_T0002666.1 MGP_LPJ_G0002554.1 mouse_genomes_project 14 48416494 48417132 + MGP_LPJ_P0002666 TR_V_gene TR_V_gene MGP_LPJ_T0039009.1 MGP_LPJ_G0021128.1 mouse_genomes_project 14 44059504 44067139 - MGP_LPJ_P0039009 Olfr722 protein_coding protein_coding MGP_LPJ_T0039671.1 MGP_LPJ_G0021355.1 mouse_genomes_project 14 58161735 58191286 + MGP_LPJ_P0039671 Serpine3 protein_coding protein_coding MGP_LPJ_T0039850.1 MGP_LPJ_G0021429.1 mouse_genomes_project 14 65635273 65656781 - MGP_LPJ_P0039850 Rhobtb2 protein_coding protein_coding MGP_LPJ_T0012991.1 MGP_LPJ_G0011082.1 mouse_genomes_project 14 47006929 47007557 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010005.1 MGP_LPJ_G0008123.1 mouse_genomes_project 14 50049214 50049291 - Mir208b miRNA miRNA MGP_LPJ_T0100361.1 MGP_LPJ_G0038624.1 mouse_genomes_project 14 116910644 116910772 + Gm23669 snoRNA snoRNA MGP_LPJ_T0038662.1 MGP_LPJ_G0021022.1 mouse_genomes_project 14 24991694 25009564 - MGP_LPJ_P0038662 Mettl6 protein_coding protein_coding MGP_LPJ_T0012998.1 MGP_LPJ_G0011089.1 mouse_genomes_project 14 48255163 48256306 + processed_pseudogene processed_pseudogene MGP_LPJ_T0039041.1 MGP_LPJ_G0021155.1 mouse_genomes_project 14 45016194 45022600 - MGP_LPJ_P0039041 Ccnb1ip1 protein_coding protein_coding MGP_LPJ_T0017324.1 MGP_LPJ_G0015185.1 mouse_genomes_project 14 38866514 38872589 - 4930431P03Rik processed_transcript retained_intron MGP_LPJ_T0017325.1 MGP_LPJ_G0015185.1 mouse_genomes_project 14 38867715 38872589 - 4930431P03Rik processed_transcript antisense MGP_LPJ_T0099075.1 MGP_LPJ_G0037338.1 mouse_genomes_project 14 82780935 82781025 - Gm23926 snRNA snRNA MGP_LPJ_T0100313.1 MGP_LPJ_G0038576.1 mouse_genomes_project 14 24505786 24505862 - Snord19 snoRNA snoRNA MGP_LPJ_T0038641.1 MGP_LPJ_G0021015.1 mouse_genomes_project 14 24709127 24712545 + MGP_LPJ_P0038641 Tnnc1 protein_coding protein_coding MGP_LPJ_T0038642.1 MGP_LPJ_G0021015.1 mouse_genomes_project 14 24709145 24712452 + MGP_LPJ_P0038642 Tnnc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038643.1 MGP_LPJ_G0021015.1 mouse_genomes_project 14 24709147 24711796 + Tnnc1 protein_coding retained_intron MGP_LPJ_T0099065.1 MGP_LPJ_G0037328.1 mouse_genomes_project 14 49546956 49547064 + Gm24705 snRNA snRNA MGP_LPJ_T0038764.1 MGP_LPJ_G0021049.1 mouse_genomes_project 14 26998549 27070194 - MGP_LPJ_P0038764 Mapk8 protein_coding protein_coding MGP_LPJ_T0038765.1 MGP_LPJ_G0021049.1 mouse_genomes_project 14 27001706 27070181 - MGP_LPJ_P0038765 Mapk8 protein_coding protein_coding MGP_LPJ_T0038766.1 MGP_LPJ_G0021049.1 mouse_genomes_project 14 27002753 27070178 - MGP_LPJ_P0038766 Mapk8 protein_coding protein_coding MGP_LPJ_T0038767.1 MGP_LPJ_G0021049.1 mouse_genomes_project 14 27002818 27032862 - MGP_LPJ_P0038767 Mapk8 protein_coding protein_coding MGP_LPJ_T0038768.1 MGP_LPJ_G0021049.1 mouse_genomes_project 14 27002953 27010856 - Mapk8 protein_coding processed_transcript MGP_LPJ_T0038769.1 MGP_LPJ_G0021049.1 mouse_genomes_project 14 27002956 27032845 - MGP_LPJ_P0038769 Mapk8 protein_coding protein_coding MGP_LPJ_T0038770.1 MGP_LPJ_G0021049.1 mouse_genomes_project 14 27004433 27009776 - Mapk8 protein_coding retained_intron MGP_LPJ_T0038771.1 MGP_LPJ_G0021049.1 mouse_genomes_project 14 27011485 27070194 - Mapk8 protein_coding retained_intron MGP_LPJ_T0038772.1 MGP_LPJ_G0021049.1 mouse_genomes_project 14 27028146 27070193 - Mapk8 protein_coding retained_intron MGP_LPJ_T0000948.1 MGP_LPJ_G0000876.1 mouse_genomes_project 14 57095762 57098673 - TEC TEC MGP_LPJ_T0039327.1 MGP_LPJ_G0021234.1 mouse_genomes_project 14 49894429 49899572 + MGP_LPJ_P0039327 Pabpn1 protein_coding protein_coding MGP_LPJ_T0039328.1 MGP_LPJ_G0021234.1 mouse_genomes_project 14 49896079 49900560 + MGP_LPJ_P0039328 Pabpn1 protein_coding protein_coding MGP_LPJ_T0039329.1 MGP_LPJ_G0021234.1 mouse_genomes_project 14 49896086 49900487 + MGP_LPJ_P0039329 Pabpn1 protein_coding protein_coding MGP_LPJ_T0039330.1 MGP_LPJ_G0021234.1 mouse_genomes_project 14 49896087 49900447 + MGP_LPJ_P0039330 Pabpn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0039331.1 MGP_LPJ_G0021234.1 mouse_genomes_project 14 49896087 49901320 + MGP_LPJ_P0039331 Pabpn1 protein_coding protein_coding MGP_LPJ_T0039332.1 MGP_LPJ_G0021234.1 mouse_genomes_project 14 49897006 49900525 + MGP_LPJ_P0039332 Pabpn1 protein_coding protein_coding MGP_LPJ_T0039333.1 MGP_LPJ_G0021234.1 mouse_genomes_project 14 49897221 49898280 + MGP_LPJ_P0039333 Pabpn1 protein_coding protein_coding MGP_LPJ_T0000952.1 MGP_LPJ_G0000880.1 mouse_genomes_project 14 62701885 62703257 + TEC TEC MGP_LPJ_T0006679.1 MGP_LPJ_G0005528.1 mouse_genomes_project 14 17851562 17852285 + 4930428N03Rik lincRNA lincRNA MGP_LPJ_T0006680.1 MGP_LPJ_G0005528.1 mouse_genomes_project 14 17851583 17861173 + 4930428N03Rik lincRNA lincRNA MGP_LPJ_T0011392.1 MGP_LPJ_G0009510.1 mouse_genomes_project 14 57068087 57068172 + Gm27747 misc_RNA misc_RNA MGP_LPJ_T0039953.1 MGP_LPJ_G0021459.1 mouse_genomes_project 14 69144119 69149465 + MGP_LPJ_P0039953 Lpar6 protein_coding protein_coding MGP_LPJ_T0002690.1 MGP_LPJ_G0002573.1 mouse_genomes_project 14 48776890 48777616 + MGP_LPJ_P0002690 Trav18 TR_V_gene TR_V_gene MGP_LPJ_T0002691.1 MGP_LPJ_G0002573.1 mouse_genomes_project 14 48776890 48777616 + MGP_LPJ_P0002691 Trav18 TR_V_gene TR_V_gene MGP_LPJ_T0002648.1 MGP_LPJ_G0002537.1 mouse_genomes_project 14 47820145 48035213 + MGP_LPJ_P0002648 TR_V_gene TR_V_gene MGP_LPJ_T0039519.1 MGP_LPJ_G0021297.1 mouse_genomes_project 14 51512229 51536048 + MGP_LPJ_P0039519 Atp12a protein_coding protein_coding MGP_LPJ_T0039090.1 MGP_LPJ_G0021179.1 mouse_genomes_project 14 45627717 45628155 - MGP_LPJ_P0039090 Ang2 protein_coding protein_coding MGP_LPJ_T0039513.1 MGP_LPJ_G0021291.1 mouse_genomes_project 14 51248411 51251464 - MGP_LPJ_P0039513 Gzmd protein_coding protein_coding MGP_LPJ_T0010033.1 MGP_LPJ_G0008151.1 mouse_genomes_project 14 113525731 113525813 + Mir19a miRNA miRNA MGP_LPJ_T0100345.1 MGP_LPJ_G0038608.1 mouse_genomes_project 14 91277747 91277878 - Gm23324 snoRNA snoRNA MGP_LPJ_T0003553.1 MGP_LPJ_G0003229.1 mouse_genomes_project 14 24234115 24242474 - 1700087M22Rik antisense antisense MGP_LPJ_T0010023.1 MGP_LPJ_G0008141.1 mouse_genomes_project 14 74349106 74349212 - Mir1971 miRNA miRNA MGP_LPJ_T0002665.1 MGP_LPJ_G0002553.1 mouse_genomes_project 14 48308393 48308946 + MGP_LPJ_P0002665 TR_V_gene TR_V_gene MGP_LPJ_T0002750.1 MGP_LPJ_G0002622.1 mouse_genomes_project 14 48810139 48810691 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0040007.1 MGP_LPJ_G0021483.1 mouse_genomes_project 14 72472185 72567898 + MGP_LPJ_P0040007 Tsc22d1 protein_coding protein_coding MGP_LPJ_T0040008.1 MGP_LPJ_G0021483.1 mouse_genomes_project 14 72472803 72567898 + MGP_LPJ_P0040008 Tsc22d1 protein_coding protein_coding MGP_LPJ_T0040009.1 MGP_LPJ_G0021483.1 mouse_genomes_project 14 72473330 72473860 + Tsc22d1 protein_coding processed_transcript MGP_LPJ_T0040010.1 MGP_LPJ_G0021483.1 mouse_genomes_project 14 72475564 72498736 + MGP_LPJ_P0040010 Tsc22d1 protein_coding nonsense_mediated_decay MGP_LPJ_T0040011.1 MGP_LPJ_G0021483.1 mouse_genomes_project 14 72475858 72496108 + MGP_LPJ_P0040011 Tsc22d1 protein_coding protein_coding MGP_LPJ_T0040012.1 MGP_LPJ_G0021483.1 mouse_genomes_project 14 72475861 72497449 + MGP_LPJ_P0040012 Tsc22d1 protein_coding nonsense_mediated_decay MGP_LPJ_T0040013.1 MGP_LPJ_G0021483.1 mouse_genomes_project 14 72476038 72497520 + MGP_LPJ_P0040013 Tsc22d1 protein_coding nonsense_mediated_decay MGP_LPJ_T0040014.1 MGP_LPJ_G0021483.1 mouse_genomes_project 14 72494874 72497491 + Tsc22d1 protein_coding processed_transcript MGP_LPJ_T0040015.1 MGP_LPJ_G0021483.1 mouse_genomes_project 14 72496041 72497491 + Tsc22d1 protein_coding retained_intron MGP_LPJ_T0040016.1 MGP_LPJ_G0021483.1 mouse_genomes_project 14 72536060 72566238 + MGP_LPJ_P0040016 Tsc22d1 protein_coding protein_coding MGP_LPJ_T0040017.1 MGP_LPJ_G0021483.1 mouse_genomes_project 14 72547303 72566306 + MGP_LPJ_P0040017 Tsc22d1 protein_coding protein_coding MGP_LPJ_T0040018.1 MGP_LPJ_G0021483.1 mouse_genomes_project 14 72547980 72567306 + MGP_LPJ_P0040018 Tsc22d1 protein_coding protein_coding MGP_LPJ_T0040019.1 MGP_LPJ_G0021483.1 mouse_genomes_project 14 72563517 72567899 + MGP_LPJ_P0040019 Tsc22d1 protein_coding protein_coding MGP_LPJ_T0040020.1 MGP_LPJ_G0021483.1 mouse_genomes_project 14 72563780 72567901 + MGP_LPJ_P0040020 Tsc22d1 protein_coding protein_coding MGP_LPJ_T0040021.1 MGP_LPJ_G0021483.1 mouse_genomes_project 14 72563832 72565045 + MGP_LPJ_P0040021 Tsc22d1 protein_coding protein_coding MGP_LPJ_T0040022.1 MGP_LPJ_G0021483.1 mouse_genomes_project 14 72564400 72566310 + MGP_LPJ_P0040022 Tsc22d1 protein_coding protein_coding MGP_LPJ_T0039603.1 MGP_LPJ_G0021327.1 mouse_genomes_project 14 54545872 54614790 - MGP_LPJ_P0039603 protein_coding protein_coding MGP_LPJ_T0039324.1 MGP_LPJ_G0021233.1 mouse_genomes_project 14 49885396 49900528 + MGP_LPJ_P0039324 Gm20521 protein_coding protein_coding MGP_LPJ_T0039710.1 MGP_LPJ_G0021372.1 mouse_genomes_project 14 59445941 59505522 + MGP_LPJ_P0039710 Pinx1 protein_coding protein_coding MGP_LPJ_T0039083.1 MGP_LPJ_G0021175.1 mouse_genomes_project 14 45515347 45516035 - MGP_LPJ_P0039083 protein_coding protein_coding MGP_LPJ_T0039086.1 MGP_LPJ_G0021175.1 mouse_genomes_project 14 45515431 45516188 - MGP_LPJ_P0039086 protein_coding protein_coding MGP_LPJ_T0099068.1 MGP_LPJ_G0037331.1 mouse_genomes_project 14 52027236 52027295 - Gm27635 snRNA snRNA MGP_LPJ_T0002745.1 MGP_LPJ_G0002617.1 mouse_genomes_project 14 48437238 48437681 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0039148.1 MGP_LPJ_G0021192.1 mouse_genomes_project 14 46630874 46634646 + MGP_LPJ_P0039148 Tmem253 protein_coding protein_coding MGP_LPJ_T0099062.1 MGP_LPJ_G0037325.1 mouse_genomes_project 14 44954869 44954976 + Gm24316 snRNA snRNA MGP_LPJ_T0040158.1 MGP_LPJ_G0021535.1 mouse_genomes_project 14 101159459 101189078 - MGP_LPJ_P0040158 Ednrb protein_coding protein_coding MGP_LPJ_T0040159.1 MGP_LPJ_G0021535.1 mouse_genomes_project 14 101159460 101188600 - MGP_LPJ_P0040159 Ednrb protein_coding protein_coding MGP_LPJ_T0039218.1 MGP_LPJ_G0021203.1 mouse_genomes_project 14 47010098 47011040 - MGP_LPJ_P0039218 Olfr1512 protein_coding protein_coding MGP_LPJ_T0006709.1 MGP_LPJ_G0005548.1 mouse_genomes_project 14 45104730 45111689 + Gm26782 lincRNA lincRNA MGP_LPJ_T0006710.1 MGP_LPJ_G0005548.1 mouse_genomes_project 14 45104742 45114308 + Gm26782 lincRNA lincRNA MGP_LPJ_T0011391.1 MGP_LPJ_G0009509.1 mouse_genomes_project 14 57053256 57053370 + Gm27845 misc_RNA misc_RNA MGP_LPJ_T0006717.1 MGP_LPJ_G0005553.1 mouse_genomes_project 14 49302371 49304267 - 5330426L24Rik lincRNA lincRNA MGP_LPJ_T0013043.1 MGP_LPJ_G0011134.1 mouse_genomes_project 14 122826261 122826802 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097991.1 MGP_LPJ_G0036272.1 mouse_genomes_project 14 100281559 100285824 - pseudogene pseudogene MGP_LPJ_T0003593.1 MGP_LPJ_G0003263.1 mouse_genomes_project 14 76012131 76014967 + Gm9748 antisense antisense MGP_LPJ_T0003594.1 MGP_LPJ_G0003263.1 mouse_genomes_project 14 76012205 76014915 + Gm9748 antisense antisense MGP_LPJ_T0038341.1 MGP_LPJ_G0020951.1 mouse_genomes_project 14 14045667 14066671 - MGP_LPJ_P0038341 Ap3m1 protein_coding protein_coding MGP_LPJ_T0038342.1 MGP_LPJ_G0020951.1 mouse_genomes_project 14 14045684 14048792 - Ap3m1 protein_coding processed_transcript MGP_LPJ_T0038343.1 MGP_LPJ_G0020951.1 mouse_genomes_project 14 14045759 14049006 - Ap3m1 protein_coding processed_transcript MGP_LPJ_T0038344.1 MGP_LPJ_G0020951.1 mouse_genomes_project 14 14050239 14066443 - MGP_LPJ_P0038344 Ap3m1 protein_coding protein_coding MGP_LPJ_T0038345.1 MGP_LPJ_G0020951.1 mouse_genomes_project 14 14052356 14066408 - MGP_LPJ_P0038345 Ap3m1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038346.1 MGP_LPJ_G0020951.1 mouse_genomes_project 14 14052400 14066684 - Ap3m1 protein_coding processed_transcript MGP_LPJ_T0038347.1 MGP_LPJ_G0020951.1 mouse_genomes_project 14 14055214 14066298 - Ap3m1 protein_coding processed_transcript MGP_LPJ_T0038348.1 MGP_LPJ_G0020951.1 mouse_genomes_project 14 14055241 14066729 - MGP_LPJ_P0038348 Ap3m1 protein_coding protein_coding MGP_LPJ_T0038349.1 MGP_LPJ_G0020951.1 mouse_genomes_project 14 14058878 14066341 - MGP_LPJ_P0038349 Ap3m1 protein_coding protein_coding MGP_LPJ_T0002602.1 MGP_LPJ_G0002499.1 mouse_genomes_project 14 49108331 49108385 + TR_J_pseudogene TR_J_pseudogene MGP_LPJ_T0099056.1 MGP_LPJ_G0037319.1 mouse_genomes_project 14 42760575 42760679 + Gm23469 snRNA snRNA MGP_LPJ_T0100325.1 MGP_LPJ_G0038588.1 mouse_genomes_project 14 52010321 52010407 - Gm22498 snoRNA snoRNA MGP_LPJ_T0000942.1 MGP_LPJ_G0000870.1 mouse_genomes_project 14 45202154 45203603 - TEC TEC MGP_LPJ_T0002532.1 MGP_LPJ_G0002434.1 mouse_genomes_project 14 49110900 49110965 + Traj57 TR_J_gene processed_transcript MGP_LPJ_T0002533.1 MGP_LPJ_G0002434.1 mouse_genomes_project 14 49110902 49110965 + MGP_LPJ_P0002533 Traj57 TR_J_gene TR_J_gene MGP_LPJ_T0002580.1 MGP_LPJ_G0002479.1 mouse_genomes_project 14 49173253 49173315 + MGP_LPJ_P0002580 Traj5 TR_J_gene TR_J_gene MGP_LPJ_T0012980.1 MGP_LPJ_G0011071.1 mouse_genomes_project 14 26486294 26487305 + processed_pseudogene processed_pseudogene MGP_LPJ_T0039516.1 MGP_LPJ_G0021294.1 mouse_genomes_project 14 51348725 51357452 - MGP_LPJ_P0039516 Gzmf protein_coding protein_coding MGP_LPJ_T0040134.1 MGP_LPJ_G0021528.1 mouse_genomes_project 14 100279943 100285933 - MGP_LPJ_P0040134 Kctd12 protein_coding protein_coding MGP_LPJ_T0040135.1 MGP_LPJ_G0021528.1 mouse_genomes_project 14 100280887 100284847 - Kctd12 protein_coding processed_transcript MGP_LPJ_T0039076.1 MGP_LPJ_G0021170.1 mouse_genomes_project 14 45348178 45364389 + MGP_LPJ_P0039076 Rnase4 protein_coding protein_coding MGP_LPJ_T0039078.1 MGP_LPJ_G0021170.1 mouse_genomes_project 14 45354224 45364389 + MGP_LPJ_P0039078 Rnase4 protein_coding protein_coding MGP_LPJ_T0012996.1 MGP_LPJ_G0011087.1 mouse_genomes_project 14 47324555 47324780 + processed_pseudogene processed_pseudogene MGP_LPJ_T0039084.1 MGP_LPJ_G0021176.1 mouse_genomes_project 14 45515431 45516227 - MGP_LPJ_P0039084 protein_coding protein_coding MGP_LPJ_T0039087.1 MGP_LPJ_G0021176.1 mouse_genomes_project 14 45515501 45585267 - MGP_LPJ_P0039087 protein_coding protein_coding MGP_LPJ_T0038747.1 MGP_LPJ_G0021047.1 mouse_genomes_project 14 26589422 26615340 + MGP_LPJ_P0038747 Lrrc18 protein_coding protein_coding MGP_LPJ_T0038748.1 MGP_LPJ_G0021047.1 mouse_genomes_project 14 26589438 26609439 + MGP_LPJ_P0038748 Lrrc18 protein_coding protein_coding MGP_LPJ_T0038749.1 MGP_LPJ_G0021047.1 mouse_genomes_project 14 26589443 26608721 + MGP_LPJ_P0038749 Lrrc18 protein_coding protein_coding MGP_LPJ_T0038750.1 MGP_LPJ_G0021047.1 mouse_genomes_project 14 26589486 26608882 + MGP_LPJ_P0038750 Lrrc18 protein_coding protein_coding MGP_LPJ_T0038751.1 MGP_LPJ_G0021047.1 mouse_genomes_project 14 26589498 26614208 + MGP_LPJ_P0038751 Lrrc18 protein_coding protein_coding MGP_LPJ_T0038752.1 MGP_LPJ_G0021047.1 mouse_genomes_project 14 26593300 26608502 + Lrrc18 protein_coding processed_transcript MGP_LPJ_T0039667.1 MGP_LPJ_G0021354.1 mouse_genomes_project 14 58053408 58088612 + Fam124a protein_coding processed_transcript MGP_LPJ_T0039668.1 MGP_LPJ_G0021354.1 mouse_genomes_project 14 58053408 58107616 + Fam124a protein_coding processed_transcript MGP_LPJ_T0039669.1 MGP_LPJ_G0021354.1 mouse_genomes_project 14 58053408 58110069 + MGP_LPJ_P0039669 Fam124a protein_coding protein_coding MGP_LPJ_T0039670.1 MGP_LPJ_G0021354.1 mouse_genomes_project 14 58053446 58063023 + Fam124a protein_coding processed_transcript MGP_LPJ_T0006737.1 MGP_LPJ_G0005567.1 mouse_genomes_project 14 66083901 66096299 + Gm26908 lincRNA lincRNA MGP_LPJ_T0017372.1 MGP_LPJ_G0015202.1 mouse_genomes_project 14 120903269 120906775 - A330035P11Rik processed_transcript processed_transcript MGP_LPJ_T0017373.1 MGP_LPJ_G0015202.1 mouse_genomes_project 14 120904197 120906796 - A330035P11Rik processed_transcript processed_transcript MGP_LPJ_T0002661.1 MGP_LPJ_G0002550.1 mouse_genomes_project 14 48305481 48306426 + MGP_LPJ_P0002661 TR_V_gene TR_V_gene MGP_LPJ_T0002663.1 MGP_LPJ_G0002550.1 mouse_genomes_project 14 48305653 48306426 + MGP_LPJ_P0002663 TR_V_gene TR_V_gene MGP_LPJ_T0038496.1 MGP_LPJ_G0020983.1 mouse_genomes_project 14 20515438 20516845 + MGP_LPJ_P0038496 protein_coding protein_coding MGP_LPJ_T0038494.1 MGP_LPJ_G0020981.1 mouse_genomes_project 14 20276422 20278420 + MGP_LPJ_P0038494 Hesx1 protein_coding protein_coding MGP_LPJ_T0000954.1 MGP_LPJ_G0000882.1 mouse_genomes_project 14 67288101 67288641 - TEC TEC MGP_LPJ_T0099052.1 MGP_LPJ_G0037315.1 mouse_genomes_project 14 27277283 27277390 + Gm26228 snRNA snRNA MGP_LPJ_T0038224.1 MGP_LPJ_G0020910.1 mouse_genomes_project 14 6953799 6954899 + MGP_LPJ_P0038224 Olfr721-ps1 protein_coding protein_coding MGP_LPJ_T0038225.1 MGP_LPJ_G0020910.1 mouse_genomes_project 14 6953924 6954899 + MGP_LPJ_P0038225 Olfr721-ps1 protein_coding protein_coding MGP_LPJ_T0040136.1 MGP_LPJ_G0021529.1 mouse_genomes_project 14 100351408 100360728 + MGP_LPJ_P0040136 Acod1 protein_coding protein_coding MGP_LPJ_T0038178.1 MGP_LPJ_G0020893.1 mouse_genomes_project 14 616443 630051 - MGP_LPJ_P0038178 Fam107a protein_coding protein_coding MGP_LPJ_T0038179.1 MGP_LPJ_G0020893.1 mouse_genomes_project 14 616443 630053 - MGP_LPJ_P0038179 Fam107a protein_coding protein_coding MGP_LPJ_T0038180.1 MGP_LPJ_G0020893.1 mouse_genomes_project 14 617713 638364 - MGP_LPJ_P0038180 Fam107a protein_coding protein_coding MGP_LPJ_T0038181.1 MGP_LPJ_G0020893.1 mouse_genomes_project 14 619737 630069 - MGP_LPJ_P0038181 Fam107a protein_coding protein_coding MGP_LPJ_T0002545.1 MGP_LPJ_G0002444.1 mouse_genomes_project 14 49127197 49127258 + MGP_LPJ_P0002545 Traj44 TR_J_gene TR_J_gene MGP_LPJ_T0039020.1 MGP_LPJ_G0021139.1 mouse_genomes_project 14 44500342 44501375 - MGP_LPJ_P0039020 Olfr734 protein_coding protein_coding MGP_LPJ_T0039515.1 MGP_LPJ_G0021293.1 mouse_genomes_project 14 51295388 51325293 - MGP_LPJ_P0039515 Gzmn protein_coding protein_coding MGP_LPJ_T0003552.1 MGP_LPJ_G0003228.1 mouse_genomes_project 14 19918971 19919469 + 9930004E17Rik antisense antisense MGP_LPJ_T0012995.1 MGP_LPJ_G0011086.1 mouse_genomes_project 14 47162427 47162995 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009988.1 MGP_LPJ_G0008106.1 mouse_genomes_project 14 13684244 13684313 + Mir6946 miRNA miRNA MGP_LPJ_T0000950.1 MGP_LPJ_G0000878.1 mouse_genomes_project 14 57112047 57114191 + TEC TEC MGP_LPJ_T0039199.1 MGP_LPJ_G0021200.1 mouse_genomes_project 14 46924798 46937483 - MGP_LPJ_P0039199 Mettl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0039200.1 MGP_LPJ_G0021200.1 mouse_genomes_project 14 46924971 46937528 - MGP_LPJ_P0039200 Mettl3 protein_coding protein_coding MGP_LPJ_T0039201.1 MGP_LPJ_G0021200.1 mouse_genomes_project 14 46924979 46930467 - MGP_LPJ_P0039201 Mettl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0039202.1 MGP_LPJ_G0021200.1 mouse_genomes_project 14 46924987 46926792 - Mettl3 protein_coding retained_intron MGP_LPJ_T0039203.1 MGP_LPJ_G0021200.1 mouse_genomes_project 14 46924987 46926874 - MGP_LPJ_P0039203 Mettl3 protein_coding protein_coding MGP_LPJ_T0039204.1 MGP_LPJ_G0021200.1 mouse_genomes_project 14 46924987 46926875 - MGP_LPJ_P0039204 Mettl3 protein_coding protein_coding MGP_LPJ_T0039205.1 MGP_LPJ_G0021200.1 mouse_genomes_project 14 46925633 46937524 - MGP_LPJ_P0039205 Mettl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0039206.1 MGP_LPJ_G0021200.1 mouse_genomes_project 14 46925833 46926885 - Mettl3 protein_coding retained_intron MGP_LPJ_T0039207.1 MGP_LPJ_G0021200.1 mouse_genomes_project 14 46926783 46928580 - Mettl3 protein_coding retained_intron MGP_LPJ_T0039208.1 MGP_LPJ_G0021200.1 mouse_genomes_project 14 46927113 46929895 - Mettl3 protein_coding retained_intron MGP_LPJ_T0039209.1 MGP_LPJ_G0021200.1 mouse_genomes_project 14 46927328 46937486 - MGP_LPJ_P0039209 Mettl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0039210.1 MGP_LPJ_G0021200.1 mouse_genomes_project 14 46927593 46937387 - MGP_LPJ_P0039210 Mettl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0039211.1 MGP_LPJ_G0021200.1 mouse_genomes_project 14 46928148 46937387 - MGP_LPJ_P0039211 Mettl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0039212.1 MGP_LPJ_G0021200.1 mouse_genomes_project 14 46928158 46937507 - MGP_LPJ_P0039212 Mettl3 protein_coding protein_coding MGP_LPJ_T0039213.1 MGP_LPJ_G0021200.1 mouse_genomes_project 14 46930474 46937499 - MGP_LPJ_P0039213 Mettl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0039214.1 MGP_LPJ_G0021200.1 mouse_genomes_project 14 46936020 46937524 - Mettl3 protein_coding retained_intron MGP_LPJ_T0039046.1 MGP_LPJ_G0021160.1 mouse_genomes_project 14 45141108 45171157 - MGP_LPJ_P0039046 Osgep protein_coding nonsense_mediated_decay MGP_LPJ_T0039047.1 MGP_LPJ_G0021160.1 mouse_genomes_project 14 45158161 45171216 - MGP_LPJ_P0039047 Osgep protein_coding protein_coding MGP_LPJ_T0039048.1 MGP_LPJ_G0021160.1 mouse_genomes_project 14 45160622 45171153 - MGP_LPJ_P0039048 Osgep protein_coding nonsense_mediated_decay MGP_LPJ_T0039049.1 MGP_LPJ_G0021160.1 mouse_genomes_project 14 45160626 45171195 - MGP_LPJ_P0039049 Osgep protein_coding nonsense_mediated_decay MGP_LPJ_T0039050.1 MGP_LPJ_G0021160.1 mouse_genomes_project 14 45160626 45171011 - MGP_LPJ_P0039050 Osgep protein_coding protein_coding MGP_LPJ_T0039051.1 MGP_LPJ_G0021160.1 mouse_genomes_project 14 45160728 45162310 - Osgep protein_coding retained_intron MGP_LPJ_T0039052.1 MGP_LPJ_G0021160.1 mouse_genomes_project 14 45161631 45170949 - MGP_LPJ_P0039052 Osgep protein_coding protein_coding MGP_LPJ_T0039053.1 MGP_LPJ_G0021160.1 mouse_genomes_project 14 45162031 45171166 - Osgep protein_coding retained_intron MGP_LPJ_T0017345.1 MGP_LPJ_G0015189.1 mouse_genomes_project 14 63107065 63118080 - 1700120O09Rik processed_transcript processed_transcript MGP_LPJ_T0002669.1 MGP_LPJ_G0002556.1 mouse_genomes_project 14 48416560 48417132 + MGP_LPJ_P0002669 TR_V_gene TR_V_gene MGP_LPJ_T0039011.1 MGP_LPJ_G0021130.1 mouse_genomes_project 14 44131827 44142165 - MGP_LPJ_P0039011 protein_coding protein_coding MGP_LPJ_T0039638.1 MGP_LPJ_G0021340.1 mouse_genomes_project 14 56164631 56179719 + MGP_LPJ_P0039638 C1qtnf9 protein_coding protein_coding MGP_LPJ_T0040224.1 MGP_LPJ_G0021563.1 mouse_genomes_project 14 119763868 119982021 + MGP_LPJ_P0040224 Farp1 protein_coding protein_coding MGP_LPJ_T0040225.1 MGP_LPJ_G0021563.1 mouse_genomes_project 14 119764232 120033270 + MGP_LPJ_P0040225 Farp1 protein_coding protein_coding MGP_LPJ_T0040226.1 MGP_LPJ_G0021563.1 mouse_genomes_project 14 119832287 119986559 + Farp1 protein_coding processed_transcript MGP_LPJ_T0040227.1 MGP_LPJ_G0021563.1 mouse_genomes_project 14 120003031 120017416 + Farp1 protein_coding retained_intron MGP_LPJ_T0038796.1 MGP_LPJ_G0021066.1 mouse_genomes_project 14 28055006 28059520 - MGP_LPJ_P0038796 Sncg protein_coding protein_coding MGP_LPJ_T0013023.1 MGP_LPJ_G0011114.1 mouse_genomes_project 14 70688656 70705433 + processed_pseudogene processed_pseudogene MGP_LPJ_T0039752.1 MGP_LPJ_G0021392.1 mouse_genomes_project 14 61496655 61512024 - MGP_LPJ_P0039752 Esco2 protein_coding protein_coding MGP_LPJ_T0039753.1 MGP_LPJ_G0021392.1 mouse_genomes_project 14 61497583 61511858 - MGP_LPJ_P0039753 Esco2 protein_coding unknown_likely_coding MGP_LPJ_T0039754.1 MGP_LPJ_G0021392.1 mouse_genomes_project 14 61503625 61504821 - Esco2 protein_coding processed_transcript MGP_LPJ_T0039755.1 MGP_LPJ_G0021392.1 mouse_genomes_project 14 61504574 61506559 - Esco2 protein_coding processed_transcript MGP_LPJ_T0038547.1 MGP_LPJ_G0021000.1 mouse_genomes_project 14 24177516 24286327 + MGP_LPJ_P0038547 Sfmbt1 protein_coding protein_coding MGP_LPJ_T0038548.1 MGP_LPJ_G0021000.1 mouse_genomes_project 14 24177834 24283448 + MGP_LPJ_P0038548 Sfmbt1 protein_coding protein_coding MGP_LPJ_T0038549.1 MGP_LPJ_G0021000.1 mouse_genomes_project 14 24178282 24291077 + MGP_LPJ_P0038549 Sfmbt1 protein_coding protein_coding MGP_LPJ_T0038550.1 MGP_LPJ_G0021000.1 mouse_genomes_project 14 24179158 24286710 + MGP_LPJ_P0038550 Sfmbt1 protein_coding protein_coding MGP_LPJ_T0038551.1 MGP_LPJ_G0021000.1 mouse_genomes_project 14 24238514 24286709 + MGP_LPJ_P0038551 Sfmbt1 protein_coding protein_coding MGP_LPJ_T0038552.1 MGP_LPJ_G0021000.1 mouse_genomes_project 14 24258752 24261399 + Sfmbt1 protein_coding retained_intron MGP_LPJ_T0100304.1 MGP_LPJ_G0038567.1 mouse_genomes_project 14 2787909 2788109 + Gm22053 snoRNA snoRNA MGP_LPJ_T0039121.1 MGP_LPJ_G0021190.1 mouse_genomes_project 14 46598847 46601597 + MGP_LPJ_P0039121 Arhgef40 protein_coding nonsense_mediated_decay MGP_LPJ_T0039122.1 MGP_LPJ_G0021190.1 mouse_genomes_project 14 46598961 46619443 + MGP_LPJ_P0039122 Arhgef40 protein_coding nonsense_mediated_decay MGP_LPJ_T0039123.1 MGP_LPJ_G0021190.1 mouse_genomes_project 14 46598966 46620039 + MGP_LPJ_P0039123 Arhgef40 protein_coding protein_coding MGP_LPJ_T0039124.1 MGP_LPJ_G0021190.1 mouse_genomes_project 14 46598972 46604819 + Arhgef40 protein_coding retained_intron MGP_LPJ_T0039125.1 MGP_LPJ_G0021190.1 mouse_genomes_project 14 46598992 46619410 + MGP_LPJ_P0039125 Arhgef40 protein_coding protein_coding MGP_LPJ_T0039126.1 MGP_LPJ_G0021190.1 mouse_genomes_project 14 46599014 46619421 + MGP_LPJ_P0039126 Arhgef40 protein_coding nonsense_mediated_decay MGP_LPJ_T0039127.1 MGP_LPJ_G0021190.1 mouse_genomes_project 14 46599037 46619415 + MGP_LPJ_P0039127 Arhgef40 protein_coding protein_coding MGP_LPJ_T0039128.1 MGP_LPJ_G0021190.1 mouse_genomes_project 14 46599038 46619411 + MGP_LPJ_P0039128 Arhgef40 protein_coding protein_coding MGP_LPJ_T0039129.1 MGP_LPJ_G0021190.1 mouse_genomes_project 14 46599040 46600200 + Arhgef40 protein_coding retained_intron MGP_LPJ_T0039130.1 MGP_LPJ_G0021190.1 mouse_genomes_project 14 46599043 46603280 + MGP_LPJ_P0039130 Arhgef40 protein_coding nonsense_mediated_decay MGP_LPJ_T0039131.1 MGP_LPJ_G0021190.1 mouse_genomes_project 14 46599059 46619411 + MGP_LPJ_P0039131 Arhgef40 protein_coding protein_coding MGP_LPJ_T0039132.1 MGP_LPJ_G0021190.1 mouse_genomes_project 14 46599094 46605809 + Arhgef40 protein_coding retained_intron MGP_LPJ_T0039133.1 MGP_LPJ_G0021190.1 mouse_genomes_project 14 46599099 46602932 + MGP_LPJ_P0039133 Arhgef40 protein_coding protein_coding MGP_LPJ_T0039134.1 MGP_LPJ_G0021190.1 mouse_genomes_project 14 46605920 46608161 + Arhgef40 protein_coding retained_intron MGP_LPJ_T0039135.1 MGP_LPJ_G0021190.1 mouse_genomes_project 14 46608157 46611117 + MGP_LPJ_P0039135 Arhgef40 protein_coding nonsense_mediated_decay MGP_LPJ_T0039136.1 MGP_LPJ_G0021190.1 mouse_genomes_project 14 46609335 46610305 + Arhgef40 protein_coding retained_intron MGP_LPJ_T0039137.1 MGP_LPJ_G0021190.1 mouse_genomes_project 14 46611707 46619417 + Arhgef40 protein_coding retained_intron MGP_LPJ_T0039138.1 MGP_LPJ_G0021190.1 mouse_genomes_project 14 46616123 46619411 + MGP_LPJ_P0039138 Arhgef40 protein_coding protein_coding MGP_LPJ_T0039139.1 MGP_LPJ_G0021190.1 mouse_genomes_project 14 46616151 46617750 + Arhgef40 protein_coding retained_intron MGP_LPJ_T0039140.1 MGP_LPJ_G0021190.1 mouse_genomes_project 14 46616198 46619414 + MGP_LPJ_P0039140 Arhgef40 protein_coding protein_coding MGP_LPJ_T0039141.1 MGP_LPJ_G0021190.1 mouse_genomes_project 14 46617357 46618808 + Arhgef40 protein_coding retained_intron MGP_LPJ_T0039142.1 MGP_LPJ_G0021190.1 mouse_genomes_project 14 46617868 46619329 + MGP_LPJ_P0039142 Arhgef40 protein_coding protein_coding MGP_LPJ_T0039143.1 MGP_LPJ_G0021190.1 mouse_genomes_project 14 46618274 46619158 + Arhgef40 protein_coding retained_intron MGP_LPJ_T0039144.1 MGP_LPJ_G0021190.1 mouse_genomes_project 14 46618288 46619100 + Arhgef40 protein_coding retained_intron MGP_LPJ_T0039145.1 MGP_LPJ_G0021190.1 mouse_genomes_project 14 46618375 46619099 + Arhgef40 protein_coding retained_intron MGP_LPJ_T0039724.1 MGP_LPJ_G0021381.1 mouse_genomes_project 14 60428011 60571298 - MGP_LPJ_P0039724 Hmbox1 protein_coding protein_coding MGP_LPJ_T0039725.1 MGP_LPJ_G0021381.1 mouse_genomes_project 14 60431038 60438693 - Hmbox1 protein_coding processed_transcript MGP_LPJ_T0039726.1 MGP_LPJ_G0021381.1 mouse_genomes_project 14 60438614 60571295 - MGP_LPJ_P0039726 Hmbox1 protein_coding protein_coding MGP_LPJ_T0039727.1 MGP_LPJ_G0021381.1 mouse_genomes_project 14 60438614 60571319 - MGP_LPJ_P0039727 Hmbox1 protein_coding protein_coding MGP_LPJ_T0039728.1 MGP_LPJ_G0021381.1 mouse_genomes_project 14 60439210 60571080 - MGP_LPJ_P0039728 Hmbox1 protein_coding protein_coding MGP_LPJ_T0039729.1 MGP_LPJ_G0021381.1 mouse_genomes_project 14 60439565 60521060 - MGP_LPJ_P0039729 Hmbox1 protein_coding protein_coding MGP_LPJ_T0039730.1 MGP_LPJ_G0021381.1 mouse_genomes_project 14 60441455 60571304 - MGP_LPJ_P0039730 Hmbox1 protein_coding protein_coding MGP_LPJ_T0039731.1 MGP_LPJ_G0021381.1 mouse_genomes_project 14 60441702 60571295 - MGP_LPJ_P0039731 Hmbox1 protein_coding protein_coding MGP_LPJ_T0039732.1 MGP_LPJ_G0021381.1 mouse_genomes_project 14 60441735 60571295 - MGP_LPJ_P0039732 Hmbox1 protein_coding protein_coding MGP_LPJ_T0039733.1 MGP_LPJ_G0021381.1 mouse_genomes_project 14 60501542 60571295 - Hmbox1 protein_coding retained_intron MGP_LPJ_T0098163.1 MGP_LPJ_G0036444.1 mouse_genomes_project 14 58370325 58370444 + n-R5s47 rRNA rRNA MGP_LPJ_T0038978.1 MGP_LPJ_G0021121.1 mouse_genomes_project 14 42765755 42774141 - MGP_LPJ_P0038978 Otx2 protein_coding protein_coding MGP_LPJ_T0038979.1 MGP_LPJ_G0021121.1 mouse_genomes_project 14 42766247 42771785 - MGP_LPJ_P0038979 Otx2 protein_coding protein_coding MGP_LPJ_T0038980.1 MGP_LPJ_G0021121.1 mouse_genomes_project 14 42766247 42776407 - MGP_LPJ_P0038980 Otx2 protein_coding protein_coding MGP_LPJ_T0038981.1 MGP_LPJ_G0021121.1 mouse_genomes_project 14 42766992 42770549 - MGP_LPJ_P0038981 Otx2 protein_coding protein_coding MGP_LPJ_T0038982.1 MGP_LPJ_G0021121.1 mouse_genomes_project 14 42767029 42776538 - MGP_LPJ_P0038982 Otx2 protein_coding protein_coding MGP_LPJ_T0038983.1 MGP_LPJ_G0021121.1 mouse_genomes_project 14 42767381 42776402 - MGP_LPJ_P0038983 Otx2 protein_coding protein_coding MGP_LPJ_T0038984.1 MGP_LPJ_G0021121.1 mouse_genomes_project 14 42769977 42776402 - MGP_LPJ_P0038984 Otx2 protein_coding protein_coding MGP_LPJ_T0038985.1 MGP_LPJ_G0021121.1 mouse_genomes_project 14 42770027 42774416 - MGP_LPJ_P0038985 Otx2 protein_coding protein_coding MGP_LPJ_T0038834.1 MGP_LPJ_G0021079.1 mouse_genomes_project 14 30862650 30869905 + MGP_LPJ_P0038834 Lrit2 protein_coding protein_coding MGP_LPJ_T0039950.1 MGP_LPJ_G0021458.1 mouse_genomes_project 14 69097863 69201591 - Rb1 protein_coding processed_transcript MGP_LPJ_T0039951.1 MGP_LPJ_G0021458.1 mouse_genomes_project 14 69102232 69240946 - MGP_LPJ_P0039951 Rb1 protein_coding protein_coding MGP_LPJ_T0039952.1 MGP_LPJ_G0021458.1 mouse_genomes_project 14 69103705 69110000 - Rb1 protein_coding retained_intron MGP_LPJ_T0039954.1 MGP_LPJ_G0021458.1 mouse_genomes_project 14 69144770 69146011 - Rb1 protein_coding processed_transcript MGP_LPJ_T0039955.1 MGP_LPJ_G0021458.1 mouse_genomes_project 14 69173348 69175302 - Rb1 protein_coding retained_intron MGP_LPJ_T0039956.1 MGP_LPJ_G0021458.1 mouse_genomes_project 14 69192614 69240765 - MGP_LPJ_P0039956 Rb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0039479.1 MGP_LPJ_G0021269.1 mouse_genomes_project 14 50790806 50804290 - MGP_LPJ_P0039479 Tgm1 protein_coding protein_coding MGP_LPJ_T0039480.1 MGP_LPJ_G0021269.1 mouse_genomes_project 14 50790806 50804290 - MGP_LPJ_P0039480 Tgm1 protein_coding protein_coding MGP_LPJ_T0039481.1 MGP_LPJ_G0021269.1 mouse_genomes_project 14 50790806 50803886 - MGP_LPJ_P0039481 Tgm1 protein_coding protein_coding MGP_LPJ_T0012983.1 MGP_LPJ_G0011074.1 mouse_genomes_project 14 38823192 38823977 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010014.1 MGP_LPJ_G0008132.1 mouse_genomes_project 14 60188082 60188167 + Mir124a-1 miRNA miRNA MGP_LPJ_T0098160.1 MGP_LPJ_G0036441.1 mouse_genomes_project 14 4808645 4808755 - n-R5s45 rRNA rRNA MGP_LPJ_T0100355.1 MGP_LPJ_G0038618.1 mouse_genomes_project 14 102013932 102014049 - Gm25724 snoRNA snoRNA MGP_LPJ_T0038994.1 MGP_LPJ_G0021124.1 mouse_genomes_project 14 43330688 43350111 + MGP_LPJ_P0038994 Naa30 protein_coding protein_coding MGP_LPJ_T0038995.1 MGP_LPJ_G0021124.1 mouse_genomes_project 14 43331015 43350268 + MGP_LPJ_P0038995 Naa30 protein_coding protein_coding MGP_LPJ_T0038996.1 MGP_LPJ_G0021124.1 mouse_genomes_project 14 43336316 43348610 + Naa30 protein_coding retained_intron MGP_LPJ_T0038997.1 MGP_LPJ_G0021124.1 mouse_genomes_project 14 43336940 43347491 + Naa30 protein_coding retained_intron MGP_LPJ_T0038838.1 MGP_LPJ_G0021082.1 mouse_genomes_project 14 30916283 30933853 - MGP_LPJ_P0038838 Ghitm protein_coding protein_coding MGP_LPJ_T0038839.1 MGP_LPJ_G0021082.1 mouse_genomes_project 14 30916284 30934036 - MGP_LPJ_P0038839 Ghitm protein_coding protein_coding MGP_LPJ_T0012973.1 MGP_LPJ_G0011064.1 mouse_genomes_project 14 19603576 19604449 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100359.1 MGP_LPJ_G0038622.1 mouse_genomes_project 14 106282483 106282601 + Gm24229 snoRNA snoRNA MGP_LPJ_T0100330.1 MGP_LPJ_G0038593.1 mouse_genomes_project 14 58166630 58166789 + Gm25162 snoRNA snoRNA MGP_LPJ_T0040160.1 MGP_LPJ_G0021536.1 mouse_genomes_project 14 101833010 101839781 - MGP_LPJ_P0040160 Pou4f1 protein_coding protein_coding MGP_LPJ_T0040161.1 MGP_LPJ_G0021536.1 mouse_genomes_project 14 101835275 101836686 - Pou4f1 protein_coding processed_transcript MGP_LPJ_T0003573.1 MGP_LPJ_G0003247.1 mouse_genomes_project 14 50123783 50126571 + Zfhx2os antisense antisense MGP_LPJ_T0039285.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49611748 49623226 - MGP_LPJ_P0039285 Acin1 protein_coding protein_coding MGP_LPJ_T0039286.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49611748 49623175 - MGP_LPJ_P0039286 Acin1 protein_coding protein_coding MGP_LPJ_T0039287.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49611748 49623254 - MGP_LPJ_P0039287 Acin1 protein_coding protein_coding MGP_LPJ_T0039288.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49611748 49656422 - MGP_LPJ_P0039288 Acin1 protein_coding protein_coding MGP_LPJ_T0039289.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49611749 49623260 - MGP_LPJ_P0039289 Acin1 protein_coding protein_coding MGP_LPJ_T0039290.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49611749 49656107 - MGP_LPJ_P0039290 Acin1 protein_coding protein_coding MGP_LPJ_T0039291.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49611754 49623241 - MGP_LPJ_P0039291 Acin1 protein_coding protein_coding MGP_LPJ_T0039292.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49612316 49622797 - MGP_LPJ_P0039292 Acin1 protein_coding protein_coding MGP_LPJ_T0039293.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49612316 49656422 - MGP_LPJ_P0039293 Acin1 protein_coding protein_coding MGP_LPJ_T0039294.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49612490 49614126 - Acin1 protein_coding retained_intron MGP_LPJ_T0039295.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49612876 49613800 - MGP_LPJ_P0039295 Acin1 protein_coding protein_coding MGP_LPJ_T0039296.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49613844 49615443 - Acin1 protein_coding retained_intron MGP_LPJ_T0039297.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49614316 49618128 - Acin1 protein_coding retained_intron MGP_LPJ_T0039298.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49614576 49615624 - Acin1 protein_coding retained_intron MGP_LPJ_T0039299.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49614790 49619816 - Acin1 protein_coding processed_transcript MGP_LPJ_T0039300.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49614882 49617892 - Acin1 protein_coding retained_intron MGP_LPJ_T0039301.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49615318 49623244 - MGP_LPJ_P0039301 Acin1 protein_coding protein_coding MGP_LPJ_T0039302.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49616132 49619450 - Acin1 protein_coding processed_transcript MGP_LPJ_T0039303.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49620342 49623240 - Acin1 protein_coding processed_transcript MGP_LPJ_T0039304.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49620395 49623240 - Acin1 protein_coding processed_transcript MGP_LPJ_T0039305.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49620957 49633425 - Acin1 protein_coding retained_intron MGP_LPJ_T0039306.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49621071 49623250 - Acin1 protein_coding retained_intron MGP_LPJ_T0039307.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49631513 49634392 - Acin1 protein_coding retained_intron MGP_LPJ_T0039308.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49634840 49655551 - MGP_LPJ_P0039308 Acin1 protein_coding protein_coding MGP_LPJ_T0039309.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49645278 49656124 - Acin1 protein_coding processed_transcript MGP_LPJ_T0039310.1 MGP_LPJ_G0021226.1 mouse_genomes_project 14 49648787 49656106 - Acin1 protein_coding retained_intron MGP_LPJ_T0101868.1 MGP_LPJ_G0039905.1 mouse_genomes_project 14 11893492 11897797 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0038910.1 MGP_LPJ_G0021109.1 mouse_genomes_project 14 40812381 40836422 + MGP_LPJ_P0038910 Cgrrf1 protein_coding protein_coding MGP_LPJ_T0038911.1 MGP_LPJ_G0021109.1 mouse_genomes_project 14 40812466 40820660 + Cgrrf1 protein_coding retained_intron MGP_LPJ_T0038912.1 MGP_LPJ_G0021109.1 mouse_genomes_project 14 40812476 40827953 + Cgrrf1 protein_coding retained_intron MGP_LPJ_T0038913.1 MGP_LPJ_G0021109.1 mouse_genomes_project 14 40812491 40829424 + Cgrrf1 protein_coding retained_intron MGP_LPJ_T0039509.1 MGP_LPJ_G0021287.1 mouse_genomes_project 14 51184713 51188614 - MGP_LPJ_P0039509 Cma2 protein_coding protein_coding MGP_LPJ_T0038156.1 MGP_LPJ_G0020884.1 mouse_genomes_project 14 89373 89849 + MGP_LPJ_P0038156 Gm26661 protein_coding protein_coding MGP_LPJ_T0038386.1 MGP_LPJ_G0020957.1 mouse_genomes_project 14 14887302 14896339 + MGP_LPJ_P0038386 Vdac2 protein_coding protein_coding MGP_LPJ_T0038387.1 MGP_LPJ_G0020957.1 mouse_genomes_project 14 14887535 14902148 + MGP_LPJ_P0038387 Vdac2 protein_coding protein_coding MGP_LPJ_T0038388.1 MGP_LPJ_G0020957.1 mouse_genomes_project 14 14887757 14893760 + MGP_LPJ_P0038388 Vdac2 protein_coding protein_coding MGP_LPJ_T0038389.1 MGP_LPJ_G0020957.1 mouse_genomes_project 14 14889642 14893954 + Vdac2 protein_coding processed_transcript MGP_LPJ_T0038390.1 MGP_LPJ_G0020957.1 mouse_genomes_project 14 14893676 14896447 + Vdac2 protein_coding retained_intron MGP_LPJ_T0038391.1 MGP_LPJ_G0020957.1 mouse_genomes_project 14 14893773 14894790 + Vdac2 protein_coding retained_intron MGP_LPJ_T0038392.1 MGP_LPJ_G0020957.1 mouse_genomes_project 14 14898173 14903351 + Vdac2 protein_coding retained_intron MGP_LPJ_T0013038.1 MGP_LPJ_G0011129.1 mouse_genomes_project 14 114063823 114064423 - processed_pseudogene processed_pseudogene MGP_LPJ_T0038540.1 MGP_LPJ_G0020999.1 mouse_genomes_project 14 24111918 24149778 + MGP_LPJ_P0038540 Rft1 protein_coding protein_coding MGP_LPJ_T0038541.1 MGP_LPJ_G0020999.1 mouse_genomes_project 14 24111933 24118922 + Rft1 protein_coding processed_transcript MGP_LPJ_T0038542.1 MGP_LPJ_G0020999.1 mouse_genomes_project 14 24111941 24120849 + Rft1 protein_coding processed_transcript MGP_LPJ_T0038543.1 MGP_LPJ_G0020999.1 mouse_genomes_project 14 24111945 24122022 + Rft1 protein_coding retained_intron MGP_LPJ_T0038544.1 MGP_LPJ_G0020999.1 mouse_genomes_project 14 24111965 24149778 + MGP_LPJ_P0038544 Rft1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038545.1 MGP_LPJ_G0020999.1 mouse_genomes_project 14 24111965 24149778 + MGP_LPJ_P0038545 Rft1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038546.1 MGP_LPJ_G0020999.1 mouse_genomes_project 14 24139756 24148415 + Rft1 protein_coding processed_transcript MGP_LPJ_T0039039.1 MGP_LPJ_G0021154.1 mouse_genomes_project 14 44989485 45012475 - MGP_LPJ_P0039039 Ttc5 protein_coding protein_coding MGP_LPJ_T0039040.1 MGP_LPJ_G0021154.1 mouse_genomes_project 14 44989964 45000387 - MGP_LPJ_P0039040 Ttc5 protein_coding unknown_likely_coding MGP_LPJ_T0038931.1 MGP_LPJ_G0021115.1 mouse_genomes_project 14 41390257 41403931 + MGP_LPJ_P0038931 Lgals3 protein_coding protein_coding MGP_LPJ_T0038932.1 MGP_LPJ_G0021115.1 mouse_genomes_project 14 41396067 41409665 + MGP_LPJ_P0038932 Lgals3 protein_coding protein_coding MGP_LPJ_T0038933.1 MGP_LPJ_G0021115.1 mouse_genomes_project 14 41396153 41409304 + MGP_LPJ_P0038933 Lgals3 protein_coding protein_coding MGP_LPJ_T0038934.1 MGP_LPJ_G0021115.1 mouse_genomes_project 14 41396170 41403830 + MGP_LPJ_P0038934 Lgals3 protein_coding protein_coding MGP_LPJ_T0038935.1 MGP_LPJ_G0021115.1 mouse_genomes_project 14 41396228 41409299 + MGP_LPJ_P0038935 Lgals3 protein_coding protein_coding MGP_LPJ_T0039836.1 MGP_LPJ_G0021420.1 mouse_genomes_project 14 64862877 64875200 + MGP_LPJ_P0039836 Stc1 protein_coding protein_coding MGP_LPJ_T0013033.1 MGP_LPJ_G0011124.1 mouse_genomes_project 14 100306923 100307387 + processed_pseudogene processed_pseudogene MGP_LPJ_T0038508.1 MGP_LPJ_G0020989.1 mouse_genomes_project 14 22296907 23139340 - MGP_LPJ_P0038508 Cacna2d3 protein_coding protein_coding MGP_LPJ_T0038289.1 MGP_LPJ_G0020928.1 mouse_genomes_project 14 13028318 13035845 - MGP_LPJ_P0038289 Saysd1 protein_coding protein_coding MGP_LPJ_T0039311.1 MGP_LPJ_G0021227.1 mouse_genomes_project 14 49655661 49660233 + MGP_LPJ_P0039311 1700123O20Rik protein_coding protein_coding MGP_LPJ_T0038529.1 MGP_LPJ_G0020998.1 mouse_genomes_project 14 24051553 24066076 - MGP_LPJ_P0038529 Prkcd protein_coding protein_coding MGP_LPJ_T0038530.1 MGP_LPJ_G0020998.1 mouse_genomes_project 14 24051561 24081970 - MGP_LPJ_P0038530 Prkcd protein_coding protein_coding MGP_LPJ_T0038531.1 MGP_LPJ_G0020998.1 mouse_genomes_project 14 24051563 24066076 - MGP_LPJ_P0038531 Prkcd protein_coding protein_coding MGP_LPJ_T0038532.1 MGP_LPJ_G0020998.1 mouse_genomes_project 14 24051799 24063596 - MGP_LPJ_P0038532 Prkcd protein_coding protein_coding MGP_LPJ_T0038533.1 MGP_LPJ_G0020998.1 mouse_genomes_project 14 24051858 24056412 - Prkcd protein_coding retained_intron MGP_LPJ_T0038534.1 MGP_LPJ_G0020998.1 mouse_genomes_project 14 24054611 24063596 - MGP_LPJ_P0038534 Prkcd protein_coding protein_coding MGP_LPJ_T0038535.1 MGP_LPJ_G0020998.1 mouse_genomes_project 14 24054611 24063596 - MGP_LPJ_P0038535 Prkcd protein_coding protein_coding MGP_LPJ_T0038536.1 MGP_LPJ_G0020998.1 mouse_genomes_project 14 24056466 24081934 - Prkcd protein_coding retained_intron MGP_LPJ_T0038537.1 MGP_LPJ_G0020998.1 mouse_genomes_project 14 24058611 24061953 - Prkcd protein_coding retained_intron MGP_LPJ_T0038538.1 MGP_LPJ_G0020998.1 mouse_genomes_project 14 24058718 24061762 - Prkcd protein_coding retained_intron MGP_LPJ_T0038539.1 MGP_LPJ_G0020998.1 mouse_genomes_project 14 24060214 24063119 - Prkcd protein_coding retained_intron MGP_LPJ_T0003567.1 MGP_LPJ_G0003242.1 mouse_genomes_project 14 49087528 49098773 - Gm43434 antisense antisense MGP_LPJ_T0012975.1 MGP_LPJ_G0011066.1 mouse_genomes_project 14 19813575 19814198 + processed_pseudogene processed_pseudogene MGP_LPJ_T0039475.1 MGP_LPJ_G0021266.1 mouse_genomes_project 14 50750686 50760295 - MGP_LPJ_P0039475 Nedd8 protein_coding protein_coding MGP_LPJ_T0039476.1 MGP_LPJ_G0021266.1 mouse_genomes_project 14 50750688 50760328 - MGP_LPJ_P0039476 Nedd8 protein_coding protein_coding MGP_LPJ_T0038451.1 MGP_LPJ_G0020970.1 mouse_genomes_project 14 19102750 19106285 - MGP_LPJ_P0038451 protein_coding protein_coding MGP_LPJ_T0039506.1 MGP_LPJ_G0021284.1 mouse_genomes_project 14 51138533 51140961 + MGP_LPJ_P0039506 Mcpt1 protein_coding protein_coding MGP_LPJ_T0039346.1 MGP_LPJ_G0021243.1 mouse_genomes_project 14 50104595 50148979 + MGP_LPJ_P0039346 Thtpa protein_coding protein_coding MGP_LPJ_T0039347.1 MGP_LPJ_G0021243.1 mouse_genomes_project 14 50105665 50149366 + Thtpa protein_coding processed_transcript MGP_LPJ_T0039348.1 MGP_LPJ_G0021243.1 mouse_genomes_project 14 50106201 50150440 + MGP_LPJ_P0039348 Thtpa protein_coding protein_coding MGP_LPJ_T0039353.1 MGP_LPJ_G0021243.1 mouse_genomes_project 14 50146237 50150440 + MGP_LPJ_P0039353 Thtpa protein_coding protein_coding MGP_LPJ_T0040196.1 MGP_LPJ_G0021554.1 mouse_genomes_project 14 117431394 117526135 + MGP_LPJ_P0040196 Cldn10 protein_coding protein_coding MGP_LPJ_T0040197.1 MGP_LPJ_G0021554.1 mouse_genomes_project 14 117431404 117526136 + MGP_LPJ_P0040197 Cldn10 protein_coding protein_coding MGP_LPJ_T0040198.1 MGP_LPJ_G0021554.1 mouse_genomes_project 14 117503035 117527100 + MGP_LPJ_P0040198 Cldn10 protein_coding protein_coding MGP_LPJ_T0038280.1 MGP_LPJ_G0020924.1 mouse_genomes_project 14 12257739 12264688 - MGP_LPJ_P0038280 Gm9637 protein_coding protein_coding MGP_LPJ_T0039998.1 MGP_LPJ_G0021475.1 mouse_genomes_project 14 71660464 71684959 + MGP_LPJ_P0039998 Erich6b protein_coding protein_coding MGP_LPJ_T0006699.1 MGP_LPJ_G0005541.1 mouse_genomes_project 14 39895217 39921366 + lincRNA lincRNA MGP_LPJ_T0098162.1 MGP_LPJ_G0036443.1 mouse_genomes_project 14 30638786 30638902 - n-R5s46 rRNA rRNA MGP_LPJ_T0003588.1 MGP_LPJ_G0003258.1 mouse_genomes_project 14 63087088 63096896 - Gm6878 antisense antisense MGP_LPJ_T0039908.1 MGP_LPJ_G0021452.1 mouse_genomes_project 14 66564717 66669433 - MGP_LPJ_P0039908 Xpo7 protein_coding protein_coding MGP_LPJ_T0039909.1 MGP_LPJ_G0021452.1 mouse_genomes_project 14 66564717 66669433 - MGP_LPJ_P0039909 Xpo7 protein_coding protein_coding MGP_LPJ_T0006708.1 MGP_LPJ_G0005547.1 mouse_genomes_project 14 44276557 44278369 + Gm45057 lincRNA lincRNA MGP_LPJ_T0040181.1 MGP_LPJ_G0021546.1 mouse_genomes_project 14 113575440 113617839 + Gpc5 protein_coding retained_intron MGP_LPJ_T0040182.1 MGP_LPJ_G0021546.1 mouse_genomes_project 14 113575475 115061091 + MGP_LPJ_P0040182 Gpc5 protein_coding protein_coding MGP_LPJ_T0040183.1 MGP_LPJ_G0021546.1 mouse_genomes_project 14 113575497 113916321 + MGP_LPJ_P0040183 Gpc5 protein_coding protein_coding MGP_LPJ_T0040184.1 MGP_LPJ_G0021546.1 mouse_genomes_project 14 113575851 115060349 + MGP_LPJ_P0040184 Gpc5 protein_coding protein_coding MGP_LPJ_T0039027.1 MGP_LPJ_G0021143.1 mouse_genomes_project 14 44610215 44611151 + MGP_LPJ_P0039027 Olfr738 protein_coding protein_coding MGP_LPJ_T0010017.1 MGP_LPJ_G0008135.1 mouse_genomes_project 14 63057250 63057345 - Gm23178 miRNA miRNA MGP_LPJ_T0012966.1 MGP_LPJ_G0011057.1 mouse_genomes_project 14 11529979 11531150 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000945.1 MGP_LPJ_G0000873.1 mouse_genomes_project 14 49855660 49881819 + TEC TEC MGP_LPJ_T0012965.1 MGP_LPJ_G0011056.1 mouse_genomes_project 14 11398748 11404726 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100350.1 MGP_LPJ_G0038613.1 mouse_genomes_project 14 95305907 95305988 - Gm26006 snoRNA snoRNA MGP_LPJ_T0038326.1 MGP_LPJ_G0020942.1 mouse_genomes_project 14 13652715 13662037 - MGP_LPJ_P0038326 Synpo2l protein_coding protein_coding MGP_LPJ_T0038327.1 MGP_LPJ_G0020942.1 mouse_genomes_project 14 13652717 13658344 - MGP_LPJ_P0038327 Synpo2l protein_coding protein_coding MGP_LPJ_T0038328.1 MGP_LPJ_G0020942.1 mouse_genomes_project 14 13653187 13662084 - MGP_LPJ_P0038328 Synpo2l protein_coding protein_coding MGP_LPJ_T0039891.1 MGP_LPJ_G0021442.1 mouse_genomes_project 14 66368500 66416257 - MGP_LPJ_P0039891 Bmp1 protein_coding protein_coding MGP_LPJ_T0039892.1 MGP_LPJ_G0021442.1 mouse_genomes_project 14 66380667 66416065 - MGP_LPJ_P0039892 Bmp1 protein_coding unknown_likely_coding MGP_LPJ_T0012981.1 MGP_LPJ_G0011072.1 mouse_genomes_project 14 33826147 33826483 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000959.1 MGP_LPJ_G0000887.1 mouse_genomes_project 14 101297662 101299420 + TEC TEC MGP_LPJ_T0040090.1 MGP_LPJ_G0021513.1 mouse_genomes_project 14 92783521 92785031 + MGP_LPJ_P0040090 4921530L21Rik protein_coding protein_coding MGP_LPJ_T0040096.1 MGP_LPJ_G0021517.1 mouse_genomes_project 14 96123192 96151559 + MGP_LPJ_P0040096 Bora protein_coding protein_coding MGP_LPJ_T0006715.1 MGP_LPJ_G0005551.1 mouse_genomes_project 14 46600516 46602993 - Gm16617 lincRNA lincRNA MGP_LPJ_T0039075.1 MGP_LPJ_G0021169.1 mouse_genomes_project 14 45348178 45360336 + MGP_LPJ_P0039075 Ang protein_coding protein_coding MGP_LPJ_T0039077.1 MGP_LPJ_G0021169.1 mouse_genomes_project 14 45354224 45360336 + MGP_LPJ_P0039077 Ang protein_coding protein_coding MGP_LPJ_T0098164.1 MGP_LPJ_G0036445.1 mouse_genomes_project 14 62317764 62317854 - Gm23899 rRNA rRNA MGP_LPJ_T0002550.1 MGP_LPJ_G0002449.1 mouse_genomes_project 14 49133406 49133469 + MGP_LPJ_P0002550 Traj39 TR_J_gene TR_J_gene MGP_LPJ_T0010030.1 MGP_LPJ_G0008148.1 mouse_genomes_project 14 109545131 109545204 + Gm22802 miRNA miRNA MGP_LPJ_T0039255.1 MGP_LPJ_G0021213.1 mouse_genomes_project 14 49381280 49384109 + MGP_LPJ_P0039255 Mrpl52 protein_coding protein_coding MGP_LPJ_T0039256.1 MGP_LPJ_G0021213.1 mouse_genomes_project 14 49381301 49382157 + Mrpl52 protein_coding retained_intron MGP_LPJ_T0039257.1 MGP_LPJ_G0021213.1 mouse_genomes_project 14 49381302 49381817 + Mrpl52 protein_coding retained_intron MGP_LPJ_T0039258.1 MGP_LPJ_G0021213.1 mouse_genomes_project 14 49381419 49384127 + Mrpl52 protein_coding retained_intron MGP_LPJ_T0039259.1 MGP_LPJ_G0021213.1 mouse_genomes_project 14 49381430 49384130 + MGP_LPJ_P0039259 Mrpl52 protein_coding protein_coding MGP_LPJ_T0038558.1 MGP_LPJ_G0021002.1 mouse_genomes_project 14 24354130 24356482 + MGP_LPJ_P0038558 Mustn1 protein_coding protein_coding MGP_LPJ_T0002581.1 MGP_LPJ_G0002480.1 mouse_genomes_project 14 49175805 49175868 + MGP_LPJ_P0002581 Traj4 TR_J_gene TR_J_gene MGP_LPJ_T0100335.1 MGP_LPJ_G0038598.1 mouse_genomes_project 14 66313859 66313969 - Gm22725 snoRNA snoRNA MGP_LPJ_T0100338.1 MGP_LPJ_G0038601.1 mouse_genomes_project 14 74786940 74787062 + Gm26251 snoRNA snoRNA MGP_LPJ_T0038226.1 MGP_LPJ_G0020911.1 mouse_genomes_project 14 7274641 7380998 + MGP_LPJ_P0038226 Slc4a7 protein_coding protein_coding MGP_LPJ_T0039120.1 MGP_LPJ_G0021189.1 mouse_genomes_project 14 46545725 46546339 - MGP_LPJ_P0039120 Rnase13 protein_coding protein_coding MGP_LPJ_T0002558.1 MGP_LPJ_G0002457.1 mouse_genomes_project 14 49143195 49143254 + MGP_LPJ_P0002558 Traj30 TR_J_gene TR_J_gene MGP_LPJ_T0011381.1 MGP_LPJ_G0009499.1 mouse_genomes_project 14 10539013 10539334 - Gm24140 misc_RNA misc_RNA MGP_LPJ_T0002567.1 MGP_LPJ_G0002466.1 mouse_genomes_project 14 49156732 49156789 + MGP_LPJ_P0002567 Traj21 TR_J_gene TR_J_gene MGP_LPJ_T0002607.1 MGP_LPJ_G0002504.1 mouse_genomes_project 14 49164574 49164608 + TR_J_pseudogene TR_J_pseudogene MGP_LPJ_T0040162.1 MGP_LPJ_G0021537.1 mouse_genomes_project 14 101849139 101894256 - MGP_LPJ_P0040162 Rnf219 protein_coding protein_coding MGP_LPJ_T0002739.1 MGP_LPJ_G0002611.1 mouse_genomes_project 14 47635992 47636272 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0010021.1 MGP_LPJ_G0008139.1 mouse_genomes_project 14 69113496 69113585 - Mir687 miRNA miRNA MGP_LPJ_T0038500.1 MGP_LPJ_G0020986.1 mouse_genomes_project 14 20811701 20837637 - MGP_LPJ_P0038500 Ccdc66 protein_coding protein_coding MGP_LPJ_T0003591.1 MGP_LPJ_G0003261.1 mouse_genomes_project 14 71170731 71172992 - Gm15629 antisense antisense MGP_LPJ_T0012964.1 MGP_LPJ_G0011055.1 mouse_genomes_project 14 11203199 11204297 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101886.1 MGP_LPJ_G0039923.1 mouse_genomes_project 14 46459382 46459853 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0039781.1 MGP_LPJ_G0021402.1 mouse_genomes_project 14 62064754 62077224 + MGP_LPJ_P0039781 Stmn4 protein_coding protein_coding MGP_LPJ_T0039782.1 MGP_LPJ_G0021402.1 mouse_genomes_project 14 62064762 62082175 + MGP_LPJ_P0039782 Stmn4 protein_coding protein_coding MGP_LPJ_T0039783.1 MGP_LPJ_G0021402.1 mouse_genomes_project 14 62064825 62076321 + Stmn4 protein_coding retained_intron MGP_LPJ_T0039784.1 MGP_LPJ_G0021402.1 mouse_genomes_project 14 62064825 62076110 + Stmn4 protein_coding processed_transcript MGP_LPJ_T0039785.1 MGP_LPJ_G0021402.1 mouse_genomes_project 14 62064831 62082169 + MGP_LPJ_P0039785 Stmn4 protein_coding protein_coding MGP_LPJ_T0039786.1 MGP_LPJ_G0021402.1 mouse_genomes_project 14 62064832 62082169 + MGP_LPJ_P0039786 Stmn4 protein_coding protein_coding MGP_LPJ_T0039787.1 MGP_LPJ_G0021402.1 mouse_genomes_project 14 62064833 62082143 + MGP_LPJ_P0039787 Stmn4 protein_coding protein_coding MGP_LPJ_T0039788.1 MGP_LPJ_G0021402.1 mouse_genomes_project 14 62064836 62077229 + MGP_LPJ_P0039788 Stmn4 protein_coding protein_coding MGP_LPJ_T0039789.1 MGP_LPJ_G0021402.1 mouse_genomes_project 14 62064839 62078569 + Stmn4 protein_coding retained_intron MGP_LPJ_T0038744.1 MGP_LPJ_G0021045.1 mouse_genomes_project 14 26440037 26532882 + MGP_LPJ_P0038744 Vstm4 protein_coding protein_coding MGP_LPJ_T0002700.1 MGP_LPJ_G0002580.1 mouse_genomes_project 14 49033452 49034063 + MGP_LPJ_P0002700 Trdv4 TR_V_gene TR_V_gene MGP_LPJ_T0099073.1 MGP_LPJ_G0037336.1 mouse_genomes_project 14 71669526 71669633 - Gm23622 snRNA snRNA MGP_LPJ_T0039999.1 MGP_LPJ_G0021476.1 mouse_genomes_project 14 71720502 71774402 - MGP_LPJ_P0039999 Cog3 protein_coding protein_coding MGP_LPJ_T0017318.1 MGP_LPJ_G0015181.1 mouse_genomes_project 14 12402463 12404414 + processed_transcript processed_transcript MGP_LPJ_T0100321.1 MGP_LPJ_G0038584.1 mouse_genomes_project 14 46838309 46838419 - Snord8 snoRNA snoRNA MGP_LPJ_T0039698.1 MGP_LPJ_G0021369.1 mouse_genomes_project 14 59041788 59058516 - MGP_LPJ_P0039698 Tdh protein_coding protein_coding MGP_LPJ_T0039699.1 MGP_LPJ_G0021369.1 mouse_genomes_project 14 59042093 59049701 - MGP_LPJ_P0039699 Tdh protein_coding nonsense_mediated_decay MGP_LPJ_T0039700.1 MGP_LPJ_G0021369.1 mouse_genomes_project 14 59042148 59049701 - MGP_LPJ_P0039700 Tdh protein_coding nonsense_mediated_decay MGP_LPJ_T0039701.1 MGP_LPJ_G0021369.1 mouse_genomes_project 14 59042148 59049701 - MGP_LPJ_P0039701 Tdh protein_coding nonsense_mediated_decay MGP_LPJ_T0039702.1 MGP_LPJ_G0021369.1 mouse_genomes_project 14 59045060 59046581 - Tdh protein_coding retained_intron MGP_LPJ_T0039703.1 MGP_LPJ_G0021369.1 mouse_genomes_project 14 59053297 59058180 - Tdh protein_coding processed_transcript MGP_LPJ_T0038864.1 MGP_LPJ_G0021094.1 mouse_genomes_project 14 38769850 38777751 - MGP_LPJ_P0038864 Ptgdr protein_coding protein_coding MGP_LPJ_T0038320.1 MGP_LPJ_G0020940.1 mouse_genomes_project 14 13536647 13598488 - MGP_LPJ_P0038320 Usp54 protein_coding protein_coding MGP_LPJ_T0038321.1 MGP_LPJ_G0020940.1 mouse_genomes_project 14 13536647 13609697 - MGP_LPJ_P0038321 Usp54 protein_coding protein_coding MGP_LPJ_T0038322.1 MGP_LPJ_G0020940.1 mouse_genomes_project 14 13565225 13574106 - MGP_LPJ_P0038322 Usp54 protein_coding protein_coding MGP_LPJ_T0038323.1 MGP_LPJ_G0020940.1 mouse_genomes_project 14 13569214 13596590 - Usp54 protein_coding retained_intron MGP_LPJ_T0038324.1 MGP_LPJ_G0020940.1 mouse_genomes_project 14 13571270 13609697 - Usp54 protein_coding retained_intron MGP_LPJ_T0003581.1 MGP_LPJ_G0003253.1 mouse_genomes_project 14 56705008 56717222 - 1700109G14Rik antisense antisense MGP_LPJ_T0003582.1 MGP_LPJ_G0003253.1 mouse_genomes_project 14 56706698 56730031 - 1700109G14Rik antisense antisense MGP_LPJ_T0003583.1 MGP_LPJ_G0003253.1 mouse_genomes_project 14 56716712 56717196 - 1700109G14Rik antisense antisense MGP_LPJ_T0038213.1 MGP_LPJ_G0020905.1 mouse_genomes_project 14 6556921 6655968 + MGP_LPJ_P0038213 Atxn7 protein_coding protein_coding MGP_LPJ_T0038214.1 MGP_LPJ_G0020905.1 mouse_genomes_project 14 6557509 6650753 + MGP_LPJ_P0038214 Atxn7 protein_coding unknown_likely_coding MGP_LPJ_T0038782.1 MGP_LPJ_G0021059.1 mouse_genomes_project 14 27755024 27769569 + MGP_LPJ_P0038782 Anxa8 protein_coding protein_coding MGP_LPJ_T0038783.1 MGP_LPJ_G0021059.1 mouse_genomes_project 14 27755068 27769019 + MGP_LPJ_P0038783 Anxa8 protein_coding protein_coding MGP_LPJ_T0002548.1 MGP_LPJ_G0002447.1 mouse_genomes_project 14 49129719 49129774 + MGP_LPJ_P0002548 Traj41 TR_J_gene TR_J_gene MGP_LPJ_T0003554.1 MGP_LPJ_G0003230.1 mouse_genomes_project 14 25854025 25856076 - Gm17210 antisense antisense MGP_LPJ_T0039579.1 MGP_LPJ_G0021320.1 mouse_genomes_project 14 53086640 53148672 - MGP_LPJ_P0039579 Zdhhc20 protein_coding protein_coding MGP_LPJ_T0039580.1 MGP_LPJ_G0021320.1 mouse_genomes_project 14 53086703 53148590 - MGP_LPJ_P0039580 Zdhhc20 protein_coding unknown_likely_coding MGP_LPJ_T0038993.1 MGP_LPJ_G0021123.1 mouse_genomes_project 14 43220693 43241311 + MGP_LPJ_P0038993 Ap5m1 protein_coding protein_coding MGP_LPJ_T0038332.1 MGP_LPJ_G0020945.1 mouse_genomes_project 14 13697578 13698987 + MGP_LPJ_P0038332 Chchd1 protein_coding protein_coding MGP_LPJ_T0038778.1 MGP_LPJ_G0021055.1 mouse_genomes_project 14 27636416 27648023 - MGP_LPJ_P0038778 Zfp488 protein_coding protein_coding MGP_LPJ_T0038859.1 MGP_LPJ_G0021090.1 mouse_genomes_project 14 35000583 35003314 + MGP_LPJ_P0038859 Sftpa1 protein_coding protein_coding MGP_LPJ_T0038860.1 MGP_LPJ_G0021090.1 mouse_genomes_project 14 35000589 35005290 + MGP_LPJ_P0038860 Sftpa1 protein_coding protein_coding MGP_LPJ_T0003559.1 MGP_LPJ_G0003235.1 mouse_genomes_project 14 33034222 33064888 + Gm20642 antisense antisense MGP_LPJ_T0013004.1 MGP_LPJ_G0011095.1 mouse_genomes_project 14 51956741 51956912 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017348.1 MGP_LPJ_G0015192.1 mouse_genomes_project 14 69088015 69101473 - Gm17233 processed_transcript processed_transcript MGP_LPJ_T0038855.1 MGP_LPJ_G0021088.1 mouse_genomes_project 14 34936198 34958208 + MGP_LPJ_P0038855 Dydc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038856.1 MGP_LPJ_G0021088.1 mouse_genomes_project 14 34936198 34958215 + MGP_LPJ_P0038856 Dydc1 protein_coding protein_coding MGP_LPJ_T0038857.1 MGP_LPJ_G0021088.1 mouse_genomes_project 14 34936227 34958211 + MGP_LPJ_P0038857 Dydc1 protein_coding protein_coding MGP_LPJ_T0039734.1 MGP_LPJ_G0021382.1 mouse_genomes_project 14 60571492 60664355 + MGP_LPJ_P0039734 Ints9 protein_coding protein_coding MGP_LPJ_T0039735.1 MGP_LPJ_G0021382.1 mouse_genomes_project 14 60571719 60664358 + MGP_LPJ_P0039735 Ints9 protein_coding unknown_likely_coding MGP_LPJ_T0038685.1 MGP_LPJ_G0021027.1 mouse_genomes_project 14 25219807 25303573 - MGP_LPJ_P0038685 Ankrd28 protein_coding unknown_likely_coding MGP_LPJ_T0038686.1 MGP_LPJ_G0021027.1 mouse_genomes_project 14 25221058 25354287 - MGP_LPJ_P0038686 Ankrd28 protein_coding protein_coding MGP_LPJ_T0003601.1 MGP_LPJ_G0003268.1 mouse_genomes_project 14 122820196 122821606 + Gm28932 antisense antisense MGP_LPJ_T0039887.1 MGP_LPJ_G0021440.1 mouse_genomes_project 14 66330629 66335353 - MGP_LPJ_P0039887 Polr3d protein_coding protein_coding MGP_LPJ_T0039888.1 MGP_LPJ_G0021440.1 mouse_genomes_project 14 66330629 66335109 - MGP_LPJ_P0039888 Polr3d protein_coding protein_coding MGP_LPJ_T0002662.1 MGP_LPJ_G0002551.1 mouse_genomes_project 14 48305502 48306426 + MGP_LPJ_P0002662 TR_V_gene TR_V_gene MGP_LPJ_T0038396.1 MGP_LPJ_G0020959.1 mouse_genomes_project 14 15041946 15047589 - MGP_LPJ_P0038396 Zfp503 protein_coding protein_coding MGP_LPJ_T0039910.1 MGP_LPJ_G0021453.1 mouse_genomes_project 14 66668834 66676410 + Dok2 protein_coding processed_transcript MGP_LPJ_T0039911.1 MGP_LPJ_G0021453.1 mouse_genomes_project 14 66668847 66674977 + Dok2 protein_coding processed_transcript MGP_LPJ_T0039912.1 MGP_LPJ_G0021453.1 mouse_genomes_project 14 66676109 66678859 + Dok2 protein_coding processed_transcript MGP_LPJ_T0039913.1 MGP_LPJ_G0021453.1 mouse_genomes_project 14 66677153 66681327 + MGP_LPJ_P0039913 Dok2 protein_coding protein_coding MGP_LPJ_T0039914.1 MGP_LPJ_G0021453.1 mouse_genomes_project 14 66678725 66679701 + Dok2 protein_coding retained_intron MGP_LPJ_T0039915.1 MGP_LPJ_G0021453.1 mouse_genomes_project 14 66679024 66680384 + Dok2 protein_coding processed_transcript MGP_LPJ_T0039916.1 MGP_LPJ_G0021453.1 mouse_genomes_project 14 66679209 66680393 + Dok2 protein_coding processed_transcript MGP_LPJ_T0039917.1 MGP_LPJ_G0021453.1 mouse_genomes_project 14 66679541 66680427 + Dok2 protein_coding retained_intron MGP_LPJ_T0038776.1 MGP_LPJ_G0021053.1 mouse_genomes_project 14 27608096 27615856 + MGP_LPJ_P0038776 Gdf2 protein_coding protein_coding MGP_LPJ_T0039611.1 MGP_LPJ_G0021331.1 mouse_genomes_project 14 54771563 54891118 + MGP_LPJ_P0039611 Cab39l protein_coding protein_coding MGP_LPJ_T0002578.1 MGP_LPJ_G0002477.1 mouse_genomes_project 14 49170952 49171011 + MGP_LPJ_P0002578 Traj7 TR_J_gene TR_J_gene MGP_LPJ_T0003549.1 MGP_LPJ_G0003225.1 mouse_genomes_project 14 18661147 18666585 - Zmiz1os1 antisense antisense MGP_LPJ_T0006731.1 MGP_LPJ_G0005565.1 mouse_genomes_project 14 60184764 60185548 + Mir124a-1hg lincRNA lincRNA MGP_LPJ_T0006732.1 MGP_LPJ_G0005565.1 mouse_genomes_project 14 60185486 60191404 + Mir124a-1hg lincRNA lincRNA MGP_LPJ_T0006733.1 MGP_LPJ_G0005565.1 mouse_genomes_project 14 60185959 60187902 + Mir124a-1hg lincRNA lincRNA MGP_LPJ_T0006734.1 MGP_LPJ_G0005565.1 mouse_genomes_project 14 60187120 60188117 + Mir124a-1hg lincRNA lincRNA MGP_LPJ_T0002554.1 MGP_LPJ_G0002453.1 mouse_genomes_project 14 49138148 49138206 + MGP_LPJ_P0002554 Traj34 TR_J_gene TR_J_gene MGP_LPJ_T0040054.1 MGP_LPJ_G0021499.1 mouse_genomes_project 14 75616392 75645064 + MGP_LPJ_P0040054 Mtrf1 protein_coding protein_coding MGP_LPJ_T0000939.1 MGP_LPJ_G0000867.1 mouse_genomes_project 14 15050427 15054097 + TEC TEC MGP_LPJ_T0038737.1 MGP_LPJ_G0021041.1 mouse_genomes_project 14 26169865 26225829 + MGP_LPJ_P0038737 Prrxl1 protein_coding protein_coding MGP_LPJ_T0038738.1 MGP_LPJ_G0021041.1 mouse_genomes_project 14 26169866 26204226 + MGP_LPJ_P0038738 Prrxl1 protein_coding protein_coding MGP_LPJ_T0038739.1 MGP_LPJ_G0021041.1 mouse_genomes_project 14 26169999 26204215 + MGP_LPJ_P0038739 Prrxl1 protein_coding protein_coding MGP_LPJ_T0038740.1 MGP_LPJ_G0021041.1 mouse_genomes_project 14 26170325 26225871 + MGP_LPJ_P0038740 Prrxl1 protein_coding protein_coding MGP_LPJ_T0099053.1 MGP_LPJ_G0037316.1 mouse_genomes_project 14 30543563 30543669 + Gm25204 snRNA snRNA MGP_LPJ_T0039848.1 MGP_LPJ_G0021427.1 mouse_genomes_project 14 65612917 65634687 + MGP_LPJ_P0039848 Tnfrsf10b protein_coding protein_coding MGP_LPJ_T0099088.1 MGP_LPJ_G0037351.1 mouse_genomes_project 14 102681927 102682035 - Gm24207 snRNA snRNA MGP_LPJ_T0010000.1 MGP_LPJ_G0008118.1 mouse_genomes_project 14 40947602 40947701 - Mir378c miRNA miRNA MGP_LPJ_T0040099.1 MGP_LPJ_G0021520.1 mouse_genomes_project 14 96384539 96399254 + MGP_LPJ_P0040099 Klf5 protein_coding protein_coding MGP_LPJ_T0039721.1 MGP_LPJ_G0021379.1 mouse_genomes_project 14 59722390 60060130 - MGP_LPJ_P0039721 Msra protein_coding protein_coding MGP_LPJ_T0039495.1 MGP_LPJ_G0021277.1 mouse_genomes_project 14 50880414 50884276 - MGP_LPJ_P0039495 Ripk3 protein_coding protein_coding MGP_LPJ_T0039496.1 MGP_LPJ_G0021277.1 mouse_genomes_project 14 50880615 50884055 - MGP_LPJ_P0039496 Ripk3 protein_coding protein_coding MGP_LPJ_T0038294.1 MGP_LPJ_G0020933.1 mouse_genomes_project 14 13315380 13335991 + MGP_LPJ_P0038294 Fam149b protein_coding protein_coding MGP_LPJ_T0038295.1 MGP_LPJ_G0020933.1 mouse_genomes_project 14 13315380 13352314 + MGP_LPJ_P0038295 Fam149b protein_coding protein_coding MGP_LPJ_T0038296.1 MGP_LPJ_G0020933.1 mouse_genomes_project 14 13315380 13352314 + MGP_LPJ_P0038296 Fam149b protein_coding protein_coding MGP_LPJ_T0038297.1 MGP_LPJ_G0020933.1 mouse_genomes_project 14 13315440 13352314 + MGP_LPJ_P0038297 Fam149b protein_coding protein_coding MGP_LPJ_T0006744.1 MGP_LPJ_G0005573.1 mouse_genomes_project 14 100281559 100285824 + Gm26778 lincRNA lincRNA MGP_LPJ_T0040069.1 MGP_LPJ_G0021506.1 mouse_genomes_project 14 76108645 76114626 - MGP_LPJ_P0040069 Gm10845 protein_coding protein_coding MGP_LPJ_T0012959.1 MGP_LPJ_G0011050.1 mouse_genomes_project 14 2206369 2206982 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006751.1 MGP_LPJ_G0005579.1 mouse_genomes_project 14 117370826 117379322 - Gm27198 lincRNA lincRNA MGP_LPJ_T0039957.1 MGP_LPJ_G0021460.1 mouse_genomes_project 14 69277319 69300427 - MGP_LPJ_P0039957 Itm2b protein_coding protein_coding MGP_LPJ_T0013016.1 MGP_LPJ_G0011107.1 mouse_genomes_project 14 60455477 60455796 + processed_pseudogene processed_pseudogene MGP_LPJ_T0040001.1 MGP_LPJ_G0021478.1 mouse_genomes_project 14 71874012 71877338 + MGP_LPJ_P0040001 protein_coding protein_coding MGP_LPJ_T0040002.1 MGP_LPJ_G0021478.1 mouse_genomes_project 14 71874251 71874889 + protein_coding retained_intron MGP_LPJ_T0040193.1 MGP_LPJ_G0021552.1 mouse_genomes_project 14 116876162 116876891 + MGP_LPJ_P0040193 Gm9376 protein_coding protein_coding MGP_LPJ_T0038795.1 MGP_LPJ_G0021065.1 mouse_genomes_project 14 28033073 28038386 - MGP_LPJ_P0038795 Fam25c protein_coding protein_coding MGP_LPJ_T0002565.1 MGP_LPJ_G0002464.1 mouse_genomes_project 14 49154022 49154082 + MGP_LPJ_P0002565 TR_J_gene TR_J_gene MGP_LPJ_T0002606.1 MGP_LPJ_G0002503.1 mouse_genomes_project 14 49135845 49135910 + TR_J_pseudogene TR_J_pseudogene MGP_LPJ_T0040152.1 MGP_LPJ_G0021533.1 mouse_genomes_project 14 100838764 100943502 + MGP_LPJ_P0040152 Scel protein_coding protein_coding MGP_LPJ_T0040153.1 MGP_LPJ_G0021533.1 mouse_genomes_project 14 100854547 100942573 + MGP_LPJ_P0040153 Scel protein_coding unknown_likely_coding MGP_LPJ_T0002579.1 MGP_LPJ_G0002478.1 mouse_genomes_project 14 49172165 49172227 + MGP_LPJ_P0002579 Traj6 TR_J_gene TR_J_gene MGP_LPJ_T0039113.1 MGP_LPJ_G0021186.1 mouse_genomes_project 14 46510660 46516924 + Slc39a2 protein_coding retained_intron MGP_LPJ_T0039114.1 MGP_LPJ_G0021186.1 mouse_genomes_project 14 46514732 46517863 + MGP_LPJ_P0039114 Slc39a2 protein_coding protein_coding MGP_LPJ_T0039115.1 MGP_LPJ_G0021186.1 mouse_genomes_project 14 46514779 46516917 + MGP_LPJ_P0039115 Slc39a2 protein_coding protein_coding MGP_LPJ_T0013024.1 MGP_LPJ_G0011115.1 mouse_genomes_project 14 76593437 76594190 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017371.1 MGP_LPJ_G0015201.1 mouse_genomes_project 14 117764486 117781948 + Gm16835 processed_transcript processed_transcript MGP_LPJ_T0038281.1 MGP_LPJ_G0020925.1 mouse_genomes_project 14 12681362 12739538 + MGP_LPJ_P0038281 Nid2 protein_coding protein_coding MGP_LPJ_T0003595.1 MGP_LPJ_G0003264.1 mouse_genomes_project 14 101022881 101027436 - Slain1os antisense antisense MGP_LPJ_T0100319.1 MGP_LPJ_G0038582.1 mouse_genomes_project 14 31220878 31221009 - Gm23909 snoRNA snoRNA MGP_LPJ_T0039505.1 MGP_LPJ_G0021283.1 mouse_genomes_project 14 51042295 51045820 - MGP_LPJ_P0039505 Cma1 protein_coding protein_coding MGP_LPJ_T0101871.1 MGP_LPJ_G0039908.1 mouse_genomes_project 14 19091815 19101293 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0038646.1 MGP_LPJ_G0021018.1 mouse_genomes_project 14 24755672 24764161 + MGP_LPJ_P0038646 Bap1 protein_coding protein_coding MGP_LPJ_T0038647.1 MGP_LPJ_G0021018.1 mouse_genomes_project 14 24755725 24757237 + Bap1 protein_coding retained_intron MGP_LPJ_T0038648.1 MGP_LPJ_G0021018.1 mouse_genomes_project 14 24755733 24758424 + Bap1 protein_coding retained_intron MGP_LPJ_T0038649.1 MGP_LPJ_G0021018.1 mouse_genomes_project 14 24755760 24764147 + Bap1 protein_coding retained_intron MGP_LPJ_T0038650.1 MGP_LPJ_G0021018.1 mouse_genomes_project 14 24755802 24759360 + MGP_LPJ_P0038650 Bap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038651.1 MGP_LPJ_G0021018.1 mouse_genomes_project 14 24760485 24762741 + MGP_LPJ_P0038651 Bap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038652.1 MGP_LPJ_G0021018.1 mouse_genomes_project 14 24760755 24761858 + Bap1 protein_coding retained_intron MGP_LPJ_T0038653.1 MGP_LPJ_G0021018.1 mouse_genomes_project 14 24761707 24763105 + Bap1 protein_coding retained_intron MGP_LPJ_T0040006.1 MGP_LPJ_G0021482.1 mouse_genomes_project 14 72158906 72185445 + MGP_LPJ_P0040006 Nufip1 protein_coding protein_coding MGP_LPJ_T0006697.1 MGP_LPJ_G0005539.1 mouse_genomes_project 14 33459783 33486800 + 1700109I08Rik lincRNA lincRNA MGP_LPJ_T0039459.1 MGP_LPJ_G0021263.1 mouse_genomes_project 14 50723723 50731010 - MGP_LPJ_P0039459 Tm9sf1 protein_coding protein_coding MGP_LPJ_T0039460.1 MGP_LPJ_G0021263.1 mouse_genomes_project 14 50723723 50731565 - MGP_LPJ_P0039460 Tm9sf1 protein_coding protein_coding MGP_LPJ_T0039461.1 MGP_LPJ_G0021263.1 mouse_genomes_project 14 50723726 50731074 - MGP_LPJ_P0039461 Tm9sf1 protein_coding protein_coding MGP_LPJ_T0039462.1 MGP_LPJ_G0021263.1 mouse_genomes_project 14 50723770 50731113 - MGP_LPJ_P0039462 Tm9sf1 protein_coding protein_coding MGP_LPJ_T0039463.1 MGP_LPJ_G0021263.1 mouse_genomes_project 14 50723774 50731120 - MGP_LPJ_P0039463 Tm9sf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0039464.1 MGP_LPJ_G0021263.1 mouse_genomes_project 14 50723818 50731099 - MGP_LPJ_P0039464 Tm9sf1 protein_coding protein_coding MGP_LPJ_T0039465.1 MGP_LPJ_G0021263.1 mouse_genomes_project 14 50725591 50731282 - MGP_LPJ_P0039465 Tm9sf1 protein_coding protein_coding MGP_LPJ_T0039466.1 MGP_LPJ_G0021263.1 mouse_genomes_project 14 50726059 50728819 - Tm9sf1 protein_coding processed_transcript MGP_LPJ_T0039467.1 MGP_LPJ_G0021263.1 mouse_genomes_project 14 50727854 50731130 - Tm9sf1 protein_coding retained_intron MGP_LPJ_T0039468.1 MGP_LPJ_G0021263.1 mouse_genomes_project 14 50728143 50731319 - Tm9sf1 protein_coding processed_transcript MGP_LPJ_T0039469.1 MGP_LPJ_G0021263.1 mouse_genomes_project 14 50728202 50729358 - Tm9sf1 protein_coding retained_intron MGP_LPJ_T0039470.1 MGP_LPJ_G0021263.1 mouse_genomes_project 14 50729176 50731530 - MGP_LPJ_P0039470 Tm9sf1 protein_coding protein_coding MGP_LPJ_T0039471.1 MGP_LPJ_G0021263.1 mouse_genomes_project 14 50730342 50731092 - MGP_LPJ_P0039471 Tm9sf1 protein_coding protein_coding MGP_LPJ_T0039284.1 MGP_LPJ_G0021225.1 mouse_genomes_project 14 49610539 49617843 + MGP_LPJ_P0039284 Gm17606 protein_coding protein_coding MGP_LPJ_T0039446.1 MGP_LPJ_G0021262.1 mouse_genomes_project 14 50713158 50723443 - MGP_LPJ_P0039446 Ipo4 protein_coding protein_coding MGP_LPJ_T0039447.1 MGP_LPJ_G0021262.1 mouse_genomes_project 14 50713392 50723390 - MGP_LPJ_P0039447 Ipo4 protein_coding nonsense_mediated_decay MGP_LPJ_T0039448.1 MGP_LPJ_G0021262.1 mouse_genomes_project 14 50713474 50714191 - Ipo4 protein_coding retained_intron MGP_LPJ_T0039449.1 MGP_LPJ_G0021262.1 mouse_genomes_project 14 50713477 50715322 - Ipo4 protein_coding processed_transcript MGP_LPJ_T0039450.1 MGP_LPJ_G0021262.1 mouse_genomes_project 14 50713480 50714176 - Ipo4 protein_coding processed_transcript MGP_LPJ_T0039451.1 MGP_LPJ_G0021262.1 mouse_genomes_project 14 50713482 50715149 - Ipo4 protein_coding retained_intron MGP_LPJ_T0039452.1 MGP_LPJ_G0021262.1 mouse_genomes_project 14 50713498 50723716 - MGP_LPJ_P0039452 Ipo4 protein_coding nonsense_mediated_decay MGP_LPJ_T0039453.1 MGP_LPJ_G0021262.1 mouse_genomes_project 14 50713654 50725654 - Ipo4 protein_coding processed_transcript MGP_LPJ_T0039454.1 MGP_LPJ_G0021262.1 mouse_genomes_project 14 50715056 50715683 - Ipo4 protein_coding retained_intron MGP_LPJ_T0039455.1 MGP_LPJ_G0021262.1 mouse_genomes_project 14 50716541 50718419 - Ipo4 protein_coding retained_intron MGP_LPJ_T0039456.1 MGP_LPJ_G0021262.1 mouse_genomes_project 14 50720686 50721417 - Ipo4 protein_coding retained_intron MGP_LPJ_T0039457.1 MGP_LPJ_G0021262.1 mouse_genomes_project 14 50721515 50722969 - Ipo4 protein_coding retained_intron MGP_LPJ_T0039458.1 MGP_LPJ_G0021262.1 mouse_genomes_project 14 50721806 50723328 - Ipo4 protein_coding retained_intron MGP_LPJ_T0009995.1 MGP_LPJ_G0008113.1 mouse_genomes_project 14 23413130 23413195 + Mir6947 miRNA miRNA MGP_LPJ_T0099084.1 MGP_LPJ_G0037347.1 mouse_genomes_project 14 96904476 96904662 - Gm22970 snRNA snRNA MGP_LPJ_T0039503.1 MGP_LPJ_G0021281.1 mouse_genomes_project 14 50981776 50995114 + MGP_LPJ_P0039503 Khnyn protein_coding protein_coding MGP_LPJ_T0038789.1 MGP_LPJ_G0021063.1 mouse_genomes_project 14 27920914 27955314 - MGP_LPJ_P0038789 Fam35a protein_coding unknown_likely_coding MGP_LPJ_T0002699.1 MGP_LPJ_G0002579.1 mouse_genomes_project 14 48920835 48921360 + MGP_LPJ_P0002699 Trav23 TR_V_gene TR_V_gene MGP_LPJ_T0009985.1 MGP_LPJ_G0008103.1 mouse_genomes_project 14 3593669 3593754 + Mir5124b miRNA miRNA MGP_LPJ_T0002574.1 MGP_LPJ_G0002473.1 mouse_genomes_project 14 49165205 49165262 + MGP_LPJ_P0002574 Traj13 TR_J_gene TR_J_gene MGP_LPJ_T0040230.1 MGP_LPJ_G0021566.1 mouse_genomes_project 14 120302131 120468727 - MGP_LPJ_P0040230 Dock9 protein_coding protein_coding MGP_LPJ_T0040231.1 MGP_LPJ_G0021566.1 mouse_genomes_project 14 120302131 120576458 - MGP_LPJ_P0040231 Dock9 protein_coding protein_coding MGP_LPJ_T0040232.1 MGP_LPJ_G0021566.1 mouse_genomes_project 14 120303595 120354112 - MGP_LPJ_P0040232 Dock9 protein_coding unknown_likely_coding MGP_LPJ_T0040233.1 MGP_LPJ_G0021566.1 mouse_genomes_project 14 120356967 120468623 - MGP_LPJ_P0040233 Dock9 protein_coding unknown_likely_coding MGP_LPJ_T0006705.1 MGP_LPJ_G0005546.1 mouse_genomes_project 14 42778861 42921992 + Otx2os1 lincRNA lincRNA MGP_LPJ_T0006706.1 MGP_LPJ_G0005546.1 mouse_genomes_project 14 42779737 42838143 + Otx2os1 lincRNA lincRNA MGP_LPJ_T0006707.1 MGP_LPJ_G0005546.1 mouse_genomes_project 14 42779840 42836083 + Otx2os1 lincRNA lincRNA MGP_LPJ_T0003551.1 MGP_LPJ_G0003227.1 mouse_genomes_project 14 19876098 19885359 - Arf4os antisense antisense MGP_LPJ_T0039217.1 MGP_LPJ_G0021202.1 mouse_genomes_project 14 46991144 46993269 - MGP_LPJ_P0039217 Olfr1513 protein_coding protein_coding MGP_LPJ_T0040237.1 MGP_LPJ_G0021570.1 mouse_genomes_project 14 120829645 120833392 + MGP_LPJ_P0040237 Timm8a2 protein_coding protein_coding MGP_LPJ_T0002683.1 MGP_LPJ_G0002568.1 mouse_genomes_project 14 48688187 48688466 + MGP_LPJ_P0002683 TR_V_gene TR_V_gene MGP_LPJ_T0100353.1 MGP_LPJ_G0038616.1 mouse_genomes_project 14 98487303 98487439 + Gm26173 snoRNA snoRNA MGP_LPJ_T0039508.1 MGP_LPJ_G0021286.1 mouse_genomes_project 14 51184648 51188614 - MGP_LPJ_P0039508 Mcpt4 protein_coding protein_coding MGP_LPJ_T0038734.1 MGP_LPJ_G0021038.1 mouse_genomes_project 14 25974949 26036368 - MGP_LPJ_P0038734 Chat protein_coding protein_coding MGP_LPJ_T0002740.1 MGP_LPJ_G0002612.1 mouse_genomes_project 14 47814363 47814642 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0038945.1 MGP_LPJ_G0021117.1 mouse_genomes_project 14 41571653 41599981 - MGP_LPJ_P0038945 Atg14 protein_coding protein_coding MGP_LPJ_T0017312.1 MGP_LPJ_G0015179.1 mouse_genomes_project 14 40702 69135 + Gm16741 processed_transcript processed_transcript MGP_LPJ_T0038205.1 MGP_LPJ_G0020901.1 mouse_genomes_project 14 5763627 6107656 + MGP_LPJ_P0038205 Synpr protein_coding protein_coding MGP_LPJ_T0038206.1 MGP_LPJ_G0020901.1 mouse_genomes_project 14 5945372 6050830 + MGP_LPJ_P0038206 Synpr protein_coding protein_coding MGP_LPJ_T0038207.1 MGP_LPJ_G0020901.1 mouse_genomes_project 14 5945398 6054524 + Synpr protein_coding retained_intron MGP_LPJ_T0038208.1 MGP_LPJ_G0020901.1 mouse_genomes_project 14 5945471 6107656 + MGP_LPJ_P0038208 Synpr protein_coding protein_coding MGP_LPJ_T0038209.1 MGP_LPJ_G0020901.1 mouse_genomes_project 14 5945485 6102710 + Synpr protein_coding retained_intron MGP_LPJ_T0038472.1 MGP_LPJ_G0020975.1 mouse_genomes_project 14 19826875 19876105 + MGP_LPJ_P0038472 Dennd6a protein_coding protein_coding MGP_LPJ_T0038473.1 MGP_LPJ_G0020975.1 mouse_genomes_project 14 19826892 19881856 + MGP_LPJ_P0038473 Dennd6a protein_coding protein_coding MGP_LPJ_T0038664.1 MGP_LPJ_G0021024.1 mouse_genomes_project 14 25038653 25096282 - MGP_LPJ_P0038664 Colq protein_coding protein_coding MGP_LPJ_T0038665.1 MGP_LPJ_G0021024.1 mouse_genomes_project 14 25038731 25073502 - MGP_LPJ_P0038665 Colq protein_coding protein_coding MGP_LPJ_T0038667.1 MGP_LPJ_G0021024.1 mouse_genomes_project 14 25068238 25109901 - MGP_LPJ_P0038667 Colq protein_coding protein_coding MGP_LPJ_T0038668.1 MGP_LPJ_G0021024.1 mouse_genomes_project 14 25097284 25109877 - Colq protein_coding processed_transcript MGP_LPJ_T0038669.1 MGP_LPJ_G0021024.1 mouse_genomes_project 14 25105318 25109866 - Colq protein_coding processed_transcript MGP_LPJ_T0100314.1 MGP_LPJ_G0038577.1 mouse_genomes_project 14 25748173 25748370 - Gm23946 snoRNA snoRNA MGP_LPJ_T0099086.1 MGP_LPJ_G0037349.1 mouse_genomes_project 14 101964544 101964651 + Gm22021 snRNA snRNA MGP_LPJ_T0002531.1 MGP_LPJ_G0002433.1 mouse_genomes_project 14 49109673 49109736 + MGP_LPJ_P0002531 Traj58 TR_J_gene TR_J_gene MGP_LPJ_T0040241.1 MGP_LPJ_G0021572.1 mouse_genomes_project 14 120986481 121220849 + MGP_LPJ_P0040241 Clybl protein_coding protein_coding MGP_LPJ_T0003536.1 MGP_LPJ_G0003219.1 mouse_genomes_project 14 13369178 13369750 + 7330404K18Rik antisense antisense MGP_LPJ_T0002687.1 MGP_LPJ_G0002571.1 mouse_genomes_project 14 48732450 48733057 + MGP_LPJ_P0002687 B230359F08Rik TR_V_gene TR_V_gene MGP_LPJ_T0099048.1 MGP_LPJ_G0037311.1 mouse_genomes_project 14 13696074 13696181 + Gm25328 snRNA snRNA MGP_LPJ_T0039091.1 MGP_LPJ_G0021180.1 mouse_genomes_project 14 45701904 45702670 - MGP_LPJ_P0039091 Rnase2a protein_coding protein_coding MGP_LPJ_T0002696.1 MGP_LPJ_G0002577.1 mouse_genomes_project 14 48885382 48885970 + MGP_LPJ_P0002696 Trdv2-1 TR_V_gene TR_V_gene MGP_LPJ_T0002697.1 MGP_LPJ_G0002577.1 mouse_genomes_project 14 48885382 48885970 + MGP_LPJ_P0002697 Trdv2-1 TR_V_gene TR_V_gene MGP_LPJ_T0039591.1 MGP_LPJ_G0021325.1 mouse_genomes_project 14 54504764 54529949 + MGP_LPJ_P0039591 Rcbtb1 protein_coding protein_coding MGP_LPJ_T0039592.1 MGP_LPJ_G0021325.1 mouse_genomes_project 14 54504783 54544279 + MGP_LPJ_P0039592 Rcbtb1 protein_coding protein_coding MGP_LPJ_T0039593.1 MGP_LPJ_G0021325.1 mouse_genomes_project 14 54504789 54542434 + MGP_LPJ_P0039593 Rcbtb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0039594.1 MGP_LPJ_G0021325.1 mouse_genomes_project 14 54504797 54544279 + MGP_LPJ_P0039594 Rcbtb1 protein_coding protein_coding MGP_LPJ_T0039595.1 MGP_LPJ_G0021325.1 mouse_genomes_project 14 54505031 54513527 + MGP_LPJ_P0039595 Rcbtb1 protein_coding protein_coding MGP_LPJ_T0039596.1 MGP_LPJ_G0021325.1 mouse_genomes_project 14 54505038 54529261 + Rcbtb1 protein_coding processed_transcript MGP_LPJ_T0039597.1 MGP_LPJ_G0021325.1 mouse_genomes_project 14 54505058 54513623 + MGP_LPJ_P0039597 Rcbtb1 protein_coding protein_coding MGP_LPJ_T0039598.1 MGP_LPJ_G0021325.1 mouse_genomes_project 14 54509168 54536870 + MGP_LPJ_P0039598 Rcbtb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0039599.1 MGP_LPJ_G0021325.1 mouse_genomes_project 14 54523167 54531580 + Rcbtb1 protein_coding processed_transcript MGP_LPJ_T0039600.1 MGP_LPJ_G0021325.1 mouse_genomes_project 14 54524339 54544273 + MGP_LPJ_P0039600 Rcbtb1 protein_coding protein_coding MGP_LPJ_T0039601.1 MGP_LPJ_G0021325.1 mouse_genomes_project 14 54529322 54531541 + Rcbtb1 protein_coding retained_intron MGP_LPJ_T0040005.1 MGP_LPJ_G0021481.1 mouse_genomes_project 14 72133189 72158831 - MGP_LPJ_P0040005 Gpalpp1 protein_coding protein_coding MGP_LPJ_T0099072.1 MGP_LPJ_G0037335.1 mouse_genomes_project 14 66320417 66320519 - Gm24890 snRNA snRNA MGP_LPJ_T0038367.1 MGP_LPJ_G0020955.1 mouse_genomes_project 14 14782092 14791805 - MGP_LPJ_P0038367 Dusp13 protein_coding protein_coding MGP_LPJ_T0038368.1 MGP_LPJ_G0020955.1 mouse_genomes_project 14 14782093 14791834 - MGP_LPJ_P0038368 Dusp13 protein_coding protein_coding MGP_LPJ_T0038369.1 MGP_LPJ_G0020955.1 mouse_genomes_project 14 14782093 14799003 - MGP_LPJ_P0038369 Dusp13 protein_coding nonsense_mediated_decay MGP_LPJ_T0038370.1 MGP_LPJ_G0020955.1 mouse_genomes_project 14 14782093 14790739 - MGP_LPJ_P0038370 Dusp13 protein_coding protein_coding MGP_LPJ_T0038371.1 MGP_LPJ_G0020955.1 mouse_genomes_project 14 14782093 14793212 - MGP_LPJ_P0038371 Dusp13 protein_coding protein_coding MGP_LPJ_T0038372.1 MGP_LPJ_G0020955.1 mouse_genomes_project 14 14782093 14791848 - MGP_LPJ_P0038372 Dusp13 protein_coding protein_coding MGP_LPJ_T0038373.1 MGP_LPJ_G0020955.1 mouse_genomes_project 14 14782093 14799005 - MGP_LPJ_P0038373 Dusp13 protein_coding protein_coding MGP_LPJ_T0038374.1 MGP_LPJ_G0020955.1 mouse_genomes_project 14 14782096 14799025 - MGP_LPJ_P0038374 Dusp13 protein_coding nonsense_mediated_decay MGP_LPJ_T0038375.1 MGP_LPJ_G0020955.1 mouse_genomes_project 14 14782287 14799003 - MGP_LPJ_P0038375 Dusp13 protein_coding nonsense_mediated_decay MGP_LPJ_T0038376.1 MGP_LPJ_G0020955.1 mouse_genomes_project 14 14782347 14799009 - MGP_LPJ_P0038376 Dusp13 protein_coding protein_coding MGP_LPJ_T0038377.1 MGP_LPJ_G0020955.1 mouse_genomes_project 14 14790472 14799009 - Dusp13 protein_coding processed_transcript MGP_LPJ_T0038378.1 MGP_LPJ_G0020955.1 mouse_genomes_project 14 14790481 14796829 - MGP_LPJ_P0038378 Dusp13 protein_coding protein_coding MGP_LPJ_T0038379.1 MGP_LPJ_G0020955.1 mouse_genomes_project 14 14793844 14799021 - MGP_LPJ_P0038379 Dusp13 protein_coding nonsense_mediated_decay MGP_LPJ_T0038380.1 MGP_LPJ_G0020955.1 mouse_genomes_project 14 14795209 14801564 - Dusp13 protein_coding processed_transcript MGP_LPJ_T0002748.1 MGP_LPJ_G0002620.1 mouse_genomes_project 14 48697752 48698423 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0039991.1 MGP_LPJ_G0021472.1 mouse_genomes_project 14 71266568 71330668 + MGP_LPJ_P0039991 Zc3h13 protein_coding unknown_likely_coding MGP_LPJ_T0039992.1 MGP_LPJ_G0021472.1 mouse_genomes_project 14 71266644 71330660 + MGP_LPJ_P0039992 Zc3h13 protein_coding protein_coding MGP_LPJ_T0017367.1 MGP_LPJ_G0015199.1 mouse_genomes_project 14 114297980 114390072 - Gm20713 processed_transcript processed_transcript MGP_LPJ_T0038914.1 MGP_LPJ_G0021110.1 mouse_genomes_project 14 40869309 41100321 + MGP_LPJ_P0038914 Samd4 protein_coding protein_coding MGP_LPJ_T0038915.1 MGP_LPJ_G0021110.1 mouse_genomes_project 14 40869420 41104915 + MGP_LPJ_P0038915 Samd4 protein_coding protein_coding MGP_LPJ_T0038916.1 MGP_LPJ_G0021110.1 mouse_genomes_project 14 40869961 40871039 + Samd4 protein_coding processed_transcript MGP_LPJ_T0038917.1 MGP_LPJ_G0021110.1 mouse_genomes_project 14 40870567 41104909 + MGP_LPJ_P0038917 Samd4 protein_coding protein_coding MGP_LPJ_T0038918.1 MGP_LPJ_G0021110.1 mouse_genomes_project 14 40995610 40997770 + Samd4 protein_coding processed_transcript MGP_LPJ_T0038919.1 MGP_LPJ_G0021110.1 mouse_genomes_project 14 40995617 41098805 + MGP_LPJ_P0038919 Samd4 protein_coding protein_coding MGP_LPJ_T0038920.1 MGP_LPJ_G0021110.1 mouse_genomes_project 14 41010796 41098630 + MGP_LPJ_P0038920 Samd4 protein_coding protein_coding MGP_LPJ_T0038921.1 MGP_LPJ_G0021110.1 mouse_genomes_project 14 41083365 41085332 + Samd4 protein_coding processed_transcript MGP_LPJ_T0039540.1 MGP_LPJ_G0021308.1 mouse_genomes_project 14 52299500 52305523 - MGP_LPJ_P0039540 Gjb2 protein_coding protein_coding MGP_LPJ_T0040228.1 MGP_LPJ_G0021564.1 mouse_genomes_project 14 120035868 120129450 - MGP_LPJ_P0040228 Stk24 protein_coding protein_coding MGP_LPJ_T0099054.1 MGP_LPJ_G0037317.1 mouse_genomes_project 14 33829759 33829923 + Gm25012 snRNA snRNA MGP_LPJ_T0039194.1 MGP_LPJ_G0021199.1 mouse_genomes_project 14 46907947 46926522 + MGP_LPJ_P0039194 Tox4 protein_coding protein_coding MGP_LPJ_T0039195.1 MGP_LPJ_G0021199.1 mouse_genomes_project 14 46908366 46922476 + Tox4 protein_coding retained_intron MGP_LPJ_T0039196.1 MGP_LPJ_G0021199.1 mouse_genomes_project 14 46908418 46908914 + Tox4 protein_coding retained_intron MGP_LPJ_T0039197.1 MGP_LPJ_G0021199.1 mouse_genomes_project 14 46908533 46917191 + Tox4 protein_coding retained_intron MGP_LPJ_T0039198.1 MGP_LPJ_G0021199.1 mouse_genomes_project 14 46915574 46916811 + Tox4 protein_coding processed_transcript MGP_LPJ_T0099064.1 MGP_LPJ_G0037327.1 mouse_genomes_project 14 46981303 46981407 + Gm26328 snRNA snRNA MGP_LPJ_T0017349.1 MGP_LPJ_G0015193.1 mouse_genomes_project 14 72741841 72756595 + 1700108F19Rik processed_transcript lincRNA MGP_LPJ_T0017350.1 MGP_LPJ_G0015193.1 mouse_genomes_project 14 72746513 72756518 + 1700108F19Rik processed_transcript lincRNA MGP_LPJ_T0017351.1 MGP_LPJ_G0015193.1 mouse_genomes_project 14 72746526 72756534 + 1700108F19Rik processed_transcript lincRNA MGP_LPJ_T0017352.1 MGP_LPJ_G0015193.1 mouse_genomes_project 14 72746526 72748783 + 1700108F19Rik processed_transcript retained_intron MGP_LPJ_T0017353.1 MGP_LPJ_G0015193.1 mouse_genomes_project 14 72746554 72756521 + 1700108F19Rik processed_transcript lincRNA MGP_LPJ_T0017354.1 MGP_LPJ_G0015193.1 mouse_genomes_project 14 72746557 72749345 + 1700108F19Rik processed_transcript lincRNA MGP_LPJ_T0017355.1 MGP_LPJ_G0015193.1 mouse_genomes_project 14 72746601 72749345 + 1700108F19Rik processed_transcript lincRNA MGP_LPJ_T0017356.1 MGP_LPJ_G0015193.1 mouse_genomes_project 14 72751242 72756313 + 1700108F19Rik processed_transcript lincRNA MGP_LPJ_T0002671.1 MGP_LPJ_G0002558.1 mouse_genomes_project 14 48459981 48460483 + MGP_LPJ_P0002671 TR_V_gene TR_V_gene MGP_LPJ_T0003572.1 MGP_LPJ_G0003246.1 mouse_genomes_project 14 50104580 50123091 + Gm20687 antisense antisense MGP_LPJ_T0000957.1 MGP_LPJ_G0000885.1 mouse_genomes_project 14 89236802 89237173 + TEC TEC MGP_LPJ_T0038523.1 MGP_LPJ_G0020996.1 mouse_genomes_project 14 23927064 23974548 + MGP_LPJ_P0038523 Dcp1a protein_coding protein_coding MGP_LPJ_T0039853.1 MGP_LPJ_G0021432.1 mouse_genomes_project 14 65974949 66012327 + MGP_LPJ_P0039853 Bin3 protein_coding protein_coding MGP_LPJ_T0039518.1 MGP_LPJ_G0021296.1 mouse_genomes_project 14 51400307 51403712 - MGP_LPJ_P0039518 Gzmb protein_coding protein_coding MGP_LPJ_T0002623.1 MGP_LPJ_G0002516.1 mouse_genomes_project 14 47313683 47314200 + MGP_LPJ_P0002623 Trav5-1 TR_V_gene TR_V_gene MGP_LPJ_T0039561.1 MGP_LPJ_G0021316.1 mouse_genomes_project 14 52881851 52996731 - MGP_LPJ_P0039561 Lats2 protein_coding nonsense_mediated_decay MGP_LPJ_T0039564.1 MGP_LPJ_G0021316.1 mouse_genomes_project 14 52935034 52996751 - MGP_LPJ_P0039564 Lats2 protein_coding protein_coding MGP_LPJ_T0039565.1 MGP_LPJ_G0021316.1 mouse_genomes_project 14 52936470 52996749 - MGP_LPJ_P0039565 Lats2 protein_coding nonsense_mediated_decay MGP_LPJ_T0039566.1 MGP_LPJ_G0021316.1 mouse_genomes_project 14 52940602 52996733 - MGP_LPJ_P0039566 Lats2 protein_coding protein_coding MGP_LPJ_T0039567.1 MGP_LPJ_G0021316.1 mouse_genomes_project 14 52945502 52948907 - MGP_LPJ_P0039567 Lats2 protein_coding protein_coding MGP_LPJ_T0039568.1 MGP_LPJ_G0021316.1 mouse_genomes_project 14 52951862 53009037 - MGP_LPJ_P0039568 Lats2 protein_coding protein_coding MGP_LPJ_T0039569.1 MGP_LPJ_G0021316.1 mouse_genomes_project 14 52971003 52984964 - MGP_LPJ_P0039569 Lats2 protein_coding protein_coding MGP_LPJ_T0039570.1 MGP_LPJ_G0021316.1 mouse_genomes_project 14 52971003 52984964 - MGP_LPJ_P0039570 Lats2 protein_coding protein_coding MGP_LPJ_T0039571.1 MGP_LPJ_G0021316.1 mouse_genomes_project 14 52984843 52995282 - MGP_LPJ_P0039571 Lats2 protein_coding protein_coding MGP_LPJ_T0039572.1 MGP_LPJ_G0021316.1 mouse_genomes_project 14 52984916 52997206 - Lats2 protein_coding processed_transcript MGP_LPJ_T0038600.1 MGP_LPJ_G0021011.1 mouse_genomes_project 14 24583881 24624674 - MGP_LPJ_P0038600 Smim4 protein_coding protein_coding MGP_LPJ_T0038601.1 MGP_LPJ_G0021011.1 mouse_genomes_project 14 24584408 24624694 - MGP_LPJ_P0038601 Smim4 protein_coding protein_coding MGP_LPJ_T0038602.1 MGP_LPJ_G0021011.1 mouse_genomes_project 14 24620442 24624619 - MGP_LPJ_P0038602 Smim4 protein_coding protein_coding MGP_LPJ_T0038603.1 MGP_LPJ_G0021011.1 mouse_genomes_project 14 24620739 24624711 - MGP_LPJ_P0038603 Smim4 protein_coding protein_coding MGP_LPJ_T0017361.1 MGP_LPJ_G0015196.1 mouse_genomes_project 14 102501339 102506618 - Gm17066 processed_transcript processed_transcript MGP_LPJ_T0017362.1 MGP_LPJ_G0015196.1 mouse_genomes_project 14 102501358 102506404 - Gm17066 processed_transcript processed_transcript MGP_LPJ_T0010011.1 MGP_LPJ_G0008129.1 mouse_genomes_project 14 58336554 58336691 + Mir8098 miRNA miRNA MGP_LPJ_T0003556.1 MGP_LPJ_G0003232.1 mouse_genomes_project 14 28189748 28190733 + Gm17110 antisense antisense MGP_LPJ_T0000956.1 MGP_LPJ_G0000884.1 mouse_genomes_project 14 85959462 85959897 + TEC TEC MGP_LPJ_T0038605.1 MGP_LPJ_G0021013.1 mouse_genomes_project 14 24638602 24640456 - Stab1 protein_coding retained_intron MGP_LPJ_T0038606.1 MGP_LPJ_G0021013.1 mouse_genomes_project 14 24638602 24642422 - Stab1 protein_coding retained_intron MGP_LPJ_T0038607.1 MGP_LPJ_G0021013.1 mouse_genomes_project 14 24638602 24639438 - MGP_LPJ_P0038607 Stab1 protein_coding protein_coding MGP_LPJ_T0038608.1 MGP_LPJ_G0021013.1 mouse_genomes_project 14 24638602 24669439 - MGP_LPJ_P0038608 Stab1 protein_coding protein_coding MGP_LPJ_T0038609.1 MGP_LPJ_G0021013.1 mouse_genomes_project 14 24638606 24645043 - Stab1 protein_coding retained_intron MGP_LPJ_T0038610.1 MGP_LPJ_G0021013.1 mouse_genomes_project 14 24638606 24639764 - Stab1 protein_coding processed_transcript MGP_LPJ_T0038611.1 MGP_LPJ_G0021013.1 mouse_genomes_project 14 24638608 24643315 - Stab1 protein_coding retained_intron MGP_LPJ_T0038612.1 MGP_LPJ_G0021013.1 mouse_genomes_project 14 24639558 24640533 - Stab1 protein_coding retained_intron MGP_LPJ_T0038613.1 MGP_LPJ_G0021013.1 mouse_genomes_project 14 24641222 24642782 - MGP_LPJ_P0038613 Stab1 protein_coding protein_coding MGP_LPJ_T0038614.1 MGP_LPJ_G0021013.1 mouse_genomes_project 14 24641973 24642587 - Stab1 protein_coding retained_intron MGP_LPJ_T0038615.1 MGP_LPJ_G0021013.1 mouse_genomes_project 14 24656164 24656912 - Stab1 protein_coding retained_intron MGP_LPJ_T0038616.1 MGP_LPJ_G0021013.1 mouse_genomes_project 14 24656164 24661357 - Stab1 protein_coding retained_intron MGP_LPJ_T0038617.1 MGP_LPJ_G0021013.1 mouse_genomes_project 14 24658037 24669393 - Stab1 protein_coding retained_intron MGP_LPJ_T0040223.1 MGP_LPJ_G0021562.1 mouse_genomes_project 14 119636183 119673637 + MGP_LPJ_P0040223 Ipo5 protein_coding protein_coding MGP_LPJ_T0039978.1 MGP_LPJ_G0021469.1 mouse_genomes_project 14 71048036 71100516 - MGP_LPJ_P0039978 Lrrc63 protein_coding protein_coding MGP_LPJ_T0038715.1 MGP_LPJ_G0021033.1 mouse_genomes_project 14 25727858 25735544 + MGP_LPJ_P0038715 protein_coding protein_coding MGP_LPJ_T0038683.1 MGP_LPJ_G0021026.1 mouse_genomes_project 14 25159426 25186911 + Btd protein_coding processed_transcript MGP_LPJ_T0038684.1 MGP_LPJ_G0021026.1 mouse_genomes_project 14 25159455 25188319 + MGP_LPJ_P0038684 Btd protein_coding protein_coding MGP_LPJ_T0013026.1 MGP_LPJ_G0011117.1 mouse_genomes_project 14 93147068 93150503 + processed_pseudogene processed_pseudogene MGP_LPJ_T0039893.1 MGP_LPJ_G0021443.1 mouse_genomes_project 14 66416938 66420089 - MGP_LPJ_P0039893 Sftpc protein_coding protein_coding MGP_LPJ_T0038253.1 MGP_LPJ_G0020920.1 mouse_genomes_project 14 10944771 10948773 - MGP_LPJ_P0038253 Rpl15 protein_coding protein_coding MGP_LPJ_T0038254.1 MGP_LPJ_G0020920.1 mouse_genomes_project 14 10947012 10949097 - MGP_LPJ_P0038254 Rpl15 protein_coding protein_coding MGP_LPJ_T0038809.1 MGP_LPJ_G0021071.1 mouse_genomes_project 14 28279815 28289328 - MGP_LPJ_P0038809 Opn4 protein_coding protein_coding MGP_LPJ_T0038810.1 MGP_LPJ_G0021071.1 mouse_genomes_project 14 28281529 28289328 - MGP_LPJ_P0038810 Opn4 protein_coding protein_coding MGP_LPJ_T0099087.1 MGP_LPJ_G0037350.1 mouse_genomes_project 14 102653903 102654010 + Gm22290 snRNA snRNA MGP_LPJ_T0040072.1 MGP_LPJ_G0021508.1 mouse_genomes_project 14 80867850 80968619 + MGP_LPJ_P0040072 Pcdh17 protein_coding protein_coding MGP_LPJ_T0009998.1 MGP_LPJ_G0008116.1 mouse_genomes_project 14 38859234 38859303 - Mir327 miRNA miRNA MGP_LPJ_T0039349.1 MGP_LPJ_G0021244.1 mouse_genomes_project 14 50110965 50143781 - MGP_LPJ_P0039349 Zfhx2 protein_coding protein_coding MGP_LPJ_T0039350.1 MGP_LPJ_G0021244.1 mouse_genomes_project 14 50116906 50122928 - Zfhx2 protein_coding retained_intron MGP_LPJ_T0039351.1 MGP_LPJ_G0021244.1 mouse_genomes_project 14 50125265 50131908 - Zfhx2 protein_coding retained_intron MGP_LPJ_T0039352.1 MGP_LPJ_G0021244.1 mouse_genomes_project 14 50141028 50143499 - Zfhx2 protein_coding retained_intron MGP_LPJ_T0039889.1 MGP_LPJ_G0021441.1 mouse_genomes_project 14 66350427 66362700 + MGP_LPJ_P0039889 Phyhip protein_coding protein_coding MGP_LPJ_T0039890.1 MGP_LPJ_G0021441.1 mouse_genomes_project 14 66351473 66357220 + MGP_LPJ_P0039890 Phyhip protein_coding protein_coding MGP_LPJ_T0010004.1 MGP_LPJ_G0008122.1 mouse_genomes_project 14 49951196 49951279 - Mir208a miRNA miRNA MGP_LPJ_T0039542.1 MGP_LPJ_G0021310.1 mouse_genomes_project 14 52325507 52343185 - MGP_LPJ_P0039542 Gjb6 protein_coding protein_coding MGP_LPJ_T0039543.1 MGP_LPJ_G0021310.1 mouse_genomes_project 14 52326486 52342855 - MGP_LPJ_P0039543 Gjb6 protein_coding protein_coding MGP_LPJ_T0039544.1 MGP_LPJ_G0021310.1 mouse_genomes_project 14 52333041 52334264 - Gjb6 protein_coding processed_transcript MGP_LPJ_T0038447.1 MGP_LPJ_G0020969.1 mouse_genomes_project 14 19057246 19102043 + MGP_LPJ_P0038447 Anxa11 protein_coding protein_coding MGP_LPJ_T0038448.1 MGP_LPJ_G0020969.1 mouse_genomes_project 14 19057273 19094279 + Anxa11 protein_coding retained_intron MGP_LPJ_T0038449.1 MGP_LPJ_G0020969.1 mouse_genomes_project 14 19057273 19102043 + Anxa11 protein_coding retained_intron MGP_LPJ_T0038450.1 MGP_LPJ_G0020969.1 mouse_genomes_project 14 19057273 19094672 + MGP_LPJ_P0038450 Anxa11 protein_coding protein_coding MGP_LPJ_T0038741.1 MGP_LPJ_G0021042.1 mouse_genomes_project 14 26236095 26264761 - MGP_LPJ_P0038741 3425401B19Rik protein_coding protein_coding MGP_LPJ_T0100357.1 MGP_LPJ_G0038620.1 mouse_genomes_project 14 103964193 103964300 - Gm24634 snoRNA snoRNA MGP_LPJ_T0038710.1 MGP_LPJ_G0021032.1 mouse_genomes_project 14 25715349 25736154 + MGP_LPJ_P0038710 protein_coding protein_coding MGP_LPJ_T0038711.1 MGP_LPJ_G0021032.1 mouse_genomes_project 14 25715467 25735482 + MGP_LPJ_P0038711 protein_coding protein_coding MGP_LPJ_T0038712.1 MGP_LPJ_G0021032.1 mouse_genomes_project 14 25721277 25727893 + MGP_LPJ_P0038712 protein_coding protein_coding MGP_LPJ_T0038713.1 MGP_LPJ_G0021032.1 mouse_genomes_project 14 25721277 25728189 + MGP_LPJ_P0038713 protein_coding protein_coding MGP_LPJ_T0038714.1 MGP_LPJ_G0021032.1 mouse_genomes_project 14 25721601 25728116 + MGP_LPJ_P0038714 protein_coding protein_coding MGP_LPJ_T0013031.1 MGP_LPJ_G0011122.1 mouse_genomes_project 14 96484033 96484374 + processed_pseudogene processed_pseudogene MGP_LPJ_T0002742.1 MGP_LPJ_G0002614.1 mouse_genomes_project 14 48123406 48124480 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0038883.1 MGP_LPJ_G0021102.1 mouse_genomes_project 14 39372610 39444586 - MGP_LPJ_P0038883 Fermt2 protein_coding protein_coding MGP_LPJ_T0038884.1 MGP_LPJ_G0021102.1 mouse_genomes_project 14 39383159 39391738 - MGP_LPJ_P0038884 Fermt2 protein_coding protein_coding MGP_LPJ_T0038885.1 MGP_LPJ_G0021102.1 mouse_genomes_project 14 39389772 39444432 - MGP_LPJ_P0038885 Fermt2 protein_coding protein_coding MGP_LPJ_T0038886.1 MGP_LPJ_G0021102.1 mouse_genomes_project 14 39419297 39444254 - Fermt2 protein_coding processed_transcript MGP_LPJ_T0002744.1 MGP_LPJ_G0002616.1 mouse_genomes_project 14 48437209 48437681 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0099066.1 MGP_LPJ_G0037329.1 mouse_genomes_project 14 50772711 50772795 - Gm25887 snRNA snRNA MGP_LPJ_T0012993.1 MGP_LPJ_G0011084.1 mouse_genomes_project 14 47006933 47007697 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013005.1 MGP_LPJ_G0011096.1 mouse_genomes_project 14 51962288 51975288 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013025.1 MGP_LPJ_G0011116.1 mouse_genomes_project 14 84900766 84901750 - processed_pseudogene processed_pseudogene MGP_LPJ_T0039314.1 MGP_LPJ_G0021230.1 mouse_genomes_project 14 49828556 49836342 - MGP_LPJ_P0039314 Homez protein_coding protein_coding MGP_LPJ_T0039315.1 MGP_LPJ_G0021230.1 mouse_genomes_project 14 49829611 49839752 - MGP_LPJ_P0039315 Homez protein_coding protein_coding MGP_LPJ_T0039316.1 MGP_LPJ_G0021230.1 mouse_genomes_project 14 49831397 49833039 - MGP_LPJ_P0039316 Homez protein_coding protein_coding MGP_LPJ_T0039317.1 MGP_LPJ_G0021230.1 mouse_genomes_project 14 49833750 49846407 - MGP_LPJ_P0039317 Homez protein_coding protein_coding MGP_LPJ_T0098370.1 MGP_LPJ_G0036651.1 mouse_genomes_project 14 45036944 45037242 - Rpph1 ribozyme ribozyme MGP_LPJ_T0040073.1 MGP_LPJ_G0021509.1 mouse_genomes_project 14 83137959 83639208 - MGP_LPJ_P0040073 Diaph3 protein_coding protein_coding MGP_LPJ_T0040074.1 MGP_LPJ_G0021509.1 mouse_genomes_project 14 83138891 83639098 - MGP_LPJ_P0040074 Diaph3 protein_coding protein_coding MGP_LPJ_T0010013.1 MGP_LPJ_G0008131.1 mouse_genomes_project 14 59308211 59308290 + Mir598 miRNA miRNA MGP_LPJ_T0040095.1 MGP_LPJ_G0021516.1 mouse_genomes_project 14 96110899 96122902 - MGP_LPJ_P0040095 Mzt1 protein_coding protein_coding MGP_LPJ_T0098496.1 MGP_LPJ_G0036773.1 mouse_genomes_project 14 51901048 51903354 - sense_intronic sense_intronic MGP_LPJ_T0038161.1 MGP_LPJ_G0020887.1 mouse_genomes_project 14 312602 369551 + MGP_LPJ_P0038161 Abhd6 protein_coding protein_coding MGP_LPJ_T0038162.1 MGP_LPJ_G0020887.1 mouse_genomes_project 14 312666 368857 + MGP_LPJ_P0038162 Abhd6 protein_coding protein_coding MGP_LPJ_T0002561.1 MGP_LPJ_G0002460.1 mouse_genomes_project 14 49145632 49145691 + MGP_LPJ_P0002561 Traj27 TR_J_gene TR_J_gene MGP_LPJ_T0039705.1 MGP_LPJ_G0021371.1 mouse_genomes_project 14 59186603 59406312 + MGP_LPJ_P0039705 Xkr6 protein_coding protein_coding MGP_LPJ_T0039706.1 MGP_LPJ_G0021371.1 mouse_genomes_project 14 59186775 59245571 + MGP_LPJ_P0039706 Xkr6 protein_coding nonsense_mediated_decay MGP_LPJ_T0039707.1 MGP_LPJ_G0021371.1 mouse_genomes_project 14 59187126 59242198 + MGP_LPJ_P0039707 Xkr6 protein_coding nonsense_mediated_decay MGP_LPJ_T0039708.1 MGP_LPJ_G0021371.1 mouse_genomes_project 14 59238545 59242486 + Xkr6 protein_coding processed_transcript MGP_LPJ_T0039709.1 MGP_LPJ_G0021371.1 mouse_genomes_project 14 59379681 59405522 + MGP_LPJ_P0039709 Xkr6 protein_coding protein_coding MGP_LPJ_T0011390.1 MGP_LPJ_G0009508.1 mouse_genomes_project 14 51693393 51693500 + Gm22431 misc_RNA misc_RNA MGP_LPJ_T0002620.1 MGP_LPJ_G0002514.1 mouse_genomes_project 14 47245791 47246645 + MGP_LPJ_P0002620 Trav2 TR_V_gene TR_V_gene MGP_LPJ_T0002621.1 MGP_LPJ_G0002514.1 mouse_genomes_project 14 47245886 47246645 + MGP_LPJ_P0002621 Trav2 TR_V_gene TR_V_gene MGP_LPJ_T0098700.1 MGP_LPJ_G0036967.1 mouse_genomes_project 14 63471858 63473796 - Gm20667 sense_overlapping sense_overlapping MGP_LPJ_T0039960.1 MGP_LPJ_G0021463.1 mouse_genomes_project 14 69448930 69450997 - MGP_LPJ_P0039960 Gm5519 protein_coding protein_coding MGP_LPJ_T0038863.1 MGP_LPJ_G0021093.1 mouse_genomes_project 14 38138128 38144766 - MGP_LPJ_P0038863 protein_coding protein_coding MGP_LPJ_T0003586.1 MGP_LPJ_G0003256.1 mouse_genomes_project 14 59697444 59702390 - 4930471C04Rik antisense antisense MGP_LPJ_T0099077.1 MGP_LPJ_G0037340.1 mouse_genomes_project 14 86005157 86005271 + Gm25886 snRNA snRNA MGP_LPJ_T0039069.1 MGP_LPJ_G0021164.1 mouse_genomes_project 14 45243556 45246564 + MGP_LPJ_P0039069 Rnase10 protein_coding protein_coding MGP_LPJ_T0039070.1 MGP_LPJ_G0021164.1 mouse_genomes_project 14 45243734 45246564 + MGP_LPJ_P0039070 Rnase10 protein_coding protein_coding MGP_LPJ_T0038215.1 MGP_LPJ_G0020906.1 mouse_genomes_project 14 6660859 6669579 - MGP_LPJ_P0038215 Psmd6 protein_coding protein_coding MGP_LPJ_T0038216.1 MGP_LPJ_G0020906.1 mouse_genomes_project 14 6662587 6665227 - Psmd6 protein_coding retained_intron MGP_LPJ_T0038217.1 MGP_LPJ_G0020906.1 mouse_genomes_project 14 6664871 6666029 - Psmd6 protein_coding retained_intron MGP_LPJ_T0038218.1 MGP_LPJ_G0020906.1 mouse_genomes_project 14 6668305 6669528 - Psmd6 protein_coding retained_intron MGP_LPJ_T0039085.1 MGP_LPJ_G0021177.1 mouse_genomes_project 14 45515431 45516229 - MGP_LPJ_P0039085 protein_coding protein_coding MGP_LPJ_T0099076.1 MGP_LPJ_G0037339.1 mouse_genomes_project 14 82883133 82883273 + Gm25115 snRNA snRNA MGP_LPJ_T0012982.1 MGP_LPJ_G0011073.1 mouse_genomes_project 14 34387236 34388239 + processed_pseudogene processed_pseudogene MGP_LPJ_T0038847.1 MGP_LPJ_G0021086.1 mouse_genomes_project 14 34863980 34874441 - MGP_LPJ_P0038847 Fam213a protein_coding protein_coding MGP_LPJ_T0038848.1 MGP_LPJ_G0021086.1 mouse_genomes_project 14 34864780 34874756 - MGP_LPJ_P0038848 Fam213a protein_coding protein_coding MGP_LPJ_T0038849.1 MGP_LPJ_G0021086.1 mouse_genomes_project 14 34868007 34875201 - MGP_LPJ_P0038849 Fam213a protein_coding protein_coding MGP_LPJ_T0038850.1 MGP_LPJ_G0021086.1 mouse_genomes_project 14 34869114 34873326 - Fam213a protein_coding retained_intron MGP_LPJ_T0038851.1 MGP_LPJ_G0021086.1 mouse_genomes_project 14 34869152 34877192 - MGP_LPJ_P0038851 Fam213a protein_coding protein_coding MGP_LPJ_T0038852.1 MGP_LPJ_G0021086.1 mouse_genomes_project 14 34869194 34883989 - MGP_LPJ_P0038852 Fam213a protein_coding protein_coding MGP_LPJ_T0038853.1 MGP_LPJ_G0021086.1 mouse_genomes_project 14 34874263 34877136 - MGP_LPJ_P0038853 Fam213a protein_coding protein_coding MGP_LPJ_T0038227.1 MGP_LPJ_G0020912.1 mouse_genomes_project 14 7400712 7616865 + MGP_LPJ_P0038227 Nek10 protein_coding protein_coding MGP_LPJ_T0038228.1 MGP_LPJ_G0020912.1 mouse_genomes_project 14 7400762 7620249 + MGP_LPJ_P0038228 Nek10 protein_coding unknown_likely_coding MGP_LPJ_T0038229.1 MGP_LPJ_G0020912.1 mouse_genomes_project 14 7400762 7620249 + MGP_LPJ_P0038229 Nek10 protein_coding protein_coding MGP_LPJ_T0038230.1 MGP_LPJ_G0020912.1 mouse_genomes_project 14 7449114 7582765 + Nek10 protein_coding processed_transcript MGP_LPJ_T0038231.1 MGP_LPJ_G0020912.1 mouse_genomes_project 14 7453398 7584540 + Nek10 protein_coding retained_intron MGP_LPJ_T0038232.1 MGP_LPJ_G0020912.1 mouse_genomes_project 14 7534337 7620299 + MGP_LPJ_P0038232 Nek10 protein_coding nonsense_mediated_decay MGP_LPJ_T0098169.1 MGP_LPJ_G0036450.1 mouse_genomes_project 14 84661387 84661487 + Gm26405 rRNA rRNA MGP_LPJ_T0038881.1 MGP_LPJ_G0021100.1 mouse_genomes_project 14 39260072 39284640 + MGP_LPJ_P0038881 protein_coding protein_coding MGP_LPJ_T0003574.1 MGP_LPJ_G0003248.1 mouse_genomes_project 14 50646765 50655538 - Gm15932 antisense antisense MGP_LPJ_T0039074.1 MGP_LPJ_G0021168.1 mouse_genomes_project 14 45312845 45313977 - MGP_LPJ_P0039074 Olfr750 protein_coding protein_coding MGP_LPJ_T0040040.1 MGP_LPJ_G0021493.1 mouse_genomes_project 14 74662831 74710237 - MGP_LPJ_P0040040 Akap11 protein_coding protein_coding MGP_LPJ_T0040041.1 MGP_LPJ_G0021493.1 mouse_genomes_project 14 74662831 74710289 - MGP_LPJ_P0040041 Akap11 protein_coding protein_coding MGP_LPJ_T0017319.1 MGP_LPJ_G0015182.1 mouse_genomes_project 14 12402463 12403515 + processed_transcript processed_transcript MGP_LPJ_T0039043.1 MGP_LPJ_G0021157.1 mouse_genomes_project 14 45054785 45104927 - MGP_LPJ_P0039043 Tep1 protein_coding protein_coding MGP_LPJ_T0038736.1 MGP_LPJ_G0021040.1 mouse_genomes_project 14 26084054 26150740 + MGP_LPJ_P0038736 Ercc6 protein_coding unknown_likely_coding MGP_LPJ_T0100334.1 MGP_LPJ_G0038597.1 mouse_genomes_project 14 63989803 63989925 - Gm22319 snoRNA snoRNA MGP_LPJ_T0038844.1 MGP_LPJ_G0021084.1 mouse_genomes_project 14 34643454 34731513 - MGP_LPJ_P0038844 Sh2d4b protein_coding protein_coding MGP_LPJ_T0100360.1 MGP_LPJ_G0038623.1 mouse_genomes_project 14 107701874 107702004 - Gm25901 snoRNA snoRNA MGP_LPJ_T0099082.1 MGP_LPJ_G0037345.1 mouse_genomes_project 14 96438243 96438365 - Gm22984 snRNA snRNA MGP_LPJ_T0039604.1 MGP_LPJ_G0021328.1 mouse_genomes_project 14 54674213 54696831 - protein_coding retained_intron MGP_LPJ_T0038292.1 MGP_LPJ_G0020931.1 mouse_genomes_project 14 13261998 13281129 + MGP_LPJ_P0038292 Nudt13 protein_coding unknown_likely_coding MGP_LPJ_T0002644.1 MGP_LPJ_G0002533.1 mouse_genomes_project 14 47729341 47729864 + MGP_LPJ_P0002644 TR_V_gene TR_V_gene MGP_LPJ_T0006682.1 MGP_LPJ_G0005530.1 mouse_genomes_project 14 18561312 18584151 - Gm26660 lincRNA lincRNA MGP_LPJ_T0013020.1 MGP_LPJ_G0011111.1 mouse_genomes_project 14 70688654 70705434 + processed_pseudogene processed_pseudogene MGP_LPJ_T0038781.1 MGP_LPJ_G0021058.1 mouse_genomes_project 14 27721442 27745041 + MGP_LPJ_P0038781 Antxrl protein_coding protein_coding MGP_LPJ_T0000941.1 MGP_LPJ_G0000869.1 mouse_genomes_project 14 41776954 41779510 + TEC TEC MGP_LPJ_T0002538.1 MGP_LPJ_G0002439.1 mouse_genomes_project 14 49122105 49122167 + MGP_LPJ_P0002538 Traj49 TR_J_gene TR_J_gene MGP_LPJ_T0002539.1 MGP_LPJ_G0002439.1 mouse_genomes_project 14 49122105 49122164 + Traj49 TR_J_gene processed_transcript MGP_LPJ_T0038946.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41682338 41776173 + MGP_LPJ_P0038946 Ktn1 protein_coding protein_coding MGP_LPJ_T0038947.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41683193 41776173 + MGP_LPJ_P0038947 Ktn1 protein_coding protein_coding MGP_LPJ_T0038948.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41683198 41700152 + MGP_LPJ_P0038948 Ktn1 protein_coding protein_coding MGP_LPJ_T0038949.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41683276 41776180 + MGP_LPJ_P0038949 Ktn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038950.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41699592 41776179 + MGP_LPJ_P0038950 Ktn1 protein_coding protein_coding MGP_LPJ_T0038951.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41699623 41775909 + MGP_LPJ_P0038951 Ktn1 protein_coding protein_coding MGP_LPJ_T0038952.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41699623 41775907 + MGP_LPJ_P0038952 Ktn1 protein_coding protein_coding MGP_LPJ_T0038953.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41699623 41775907 + MGP_LPJ_P0038953 Ktn1 protein_coding protein_coding MGP_LPJ_T0038954.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41699623 41775907 + MGP_LPJ_P0038954 Ktn1 protein_coding protein_coding MGP_LPJ_T0038955.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41699623 41775909 + MGP_LPJ_P0038955 Ktn1 protein_coding protein_coding MGP_LPJ_T0038956.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41699623 41775895 + MGP_LPJ_P0038956 Ktn1 protein_coding protein_coding MGP_LPJ_T0038957.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41699623 41775905 + MGP_LPJ_P0038957 Ktn1 protein_coding protein_coding MGP_LPJ_T0038958.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41699623 41775907 + MGP_LPJ_P0038958 Ktn1 protein_coding protein_coding MGP_LPJ_T0038959.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41699623 41775907 + MGP_LPJ_P0038959 Ktn1 protein_coding protein_coding MGP_LPJ_T0038960.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41699623 41775907 + MGP_LPJ_P0038960 Ktn1 protein_coding protein_coding MGP_LPJ_T0038961.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41699623 41775900 + MGP_LPJ_P0038961 Ktn1 protein_coding protein_coding MGP_LPJ_T0038962.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41699623 41775907 + MGP_LPJ_P0038962 Ktn1 protein_coding protein_coding MGP_LPJ_T0038963.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41699623 41775903 + MGP_LPJ_P0038963 Ktn1 protein_coding protein_coding MGP_LPJ_T0038964.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41699623 41775904 + MGP_LPJ_P0038964 Ktn1 protein_coding protein_coding MGP_LPJ_T0038965.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41699623 41775907 + MGP_LPJ_P0038965 Ktn1 protein_coding protein_coding MGP_LPJ_T0038966.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41699623 41775907 + MGP_LPJ_P0038966 Ktn1 protein_coding protein_coding MGP_LPJ_T0038967.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41738284 41742081 + Ktn1 protein_coding retained_intron MGP_LPJ_T0038968.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41743298 41754262 + Ktn1 protein_coding retained_intron MGP_LPJ_T0038969.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41753379 41764500 + Ktn1 protein_coding retained_intron MGP_LPJ_T0038970.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41764383 41765859 + Ktn1 protein_coding retained_intron MGP_LPJ_T0038971.1 MGP_LPJ_G0021118.1 mouse_genomes_project 14 41769274 41776177 + Ktn1 protein_coding retained_intron MGP_LPJ_T0099091.1 MGP_LPJ_G0037354.1 mouse_genomes_project 14 108599314 108599417 + Gm26255 snRNA snRNA MGP_LPJ_T0002626.1 MGP_LPJ_G0002519.1 mouse_genomes_project 14 47352348 47352802 + MGP_LPJ_P0002626 Trav6-2 TR_V_gene TR_V_gene MGP_LPJ_T0002627.1 MGP_LPJ_G0002519.1 mouse_genomes_project 14 47352348 47352802 + MGP_LPJ_P0002627 Trav6-2 TR_V_gene TR_V_gene MGP_LPJ_T0099090.1 MGP_LPJ_G0037353.1 mouse_genomes_project 14 108267550 108267657 - Gm23242 snRNA snRNA MGP_LPJ_T0039186.1 MGP_LPJ_G0021198.1 mouse_genomes_project 14 46891276 46908347 - MGP_LPJ_P0039186 Rab2b protein_coding protein_coding MGP_LPJ_T0039187.1 MGP_LPJ_G0021198.1 mouse_genomes_project 14 46891283 46908100 - MGP_LPJ_P0039187 Rab2b protein_coding protein_coding MGP_LPJ_T0039188.1 MGP_LPJ_G0021198.1 mouse_genomes_project 14 46891286 46897904 - Rab2b protein_coding retained_intron MGP_LPJ_T0039189.1 MGP_LPJ_G0021198.1 mouse_genomes_project 14 46891288 46908141 - MGP_LPJ_P0039189 Rab2b protein_coding protein_coding MGP_LPJ_T0039190.1 MGP_LPJ_G0021198.1 mouse_genomes_project 14 46893226 46907466 - Rab2b protein_coding processed_transcript MGP_LPJ_T0039191.1 MGP_LPJ_G0021198.1 mouse_genomes_project 14 46893226 46908043 - MGP_LPJ_P0039191 Rab2b protein_coding nonsense_mediated_decay MGP_LPJ_T0039192.1 MGP_LPJ_G0021198.1 mouse_genomes_project 14 46893226 46908043 - MGP_LPJ_P0039192 Rab2b protein_coding nonsense_mediated_decay MGP_LPJ_T0039193.1 MGP_LPJ_G0021198.1 mouse_genomes_project 14 46894266 46904099 - MGP_LPJ_P0039193 Rab2b protein_coding nonsense_mediated_decay MGP_LPJ_T0002654.1 MGP_LPJ_G0002543.1 mouse_genomes_project 14 48130414 48131016 + MGP_LPJ_P0002654 TR_V_gene TR_V_gene MGP_LPJ_T0038811.1 MGP_LPJ_G0021072.1 mouse_genomes_project 14 28368206 28439887 + MGP_LPJ_P0038811 Wapl protein_coding protein_coding MGP_LPJ_T0038812.1 MGP_LPJ_G0021072.1 mouse_genomes_project 14 28368242 28437750 + MGP_LPJ_P0038812 Wapl protein_coding protein_coding MGP_LPJ_T0038813.1 MGP_LPJ_G0021072.1 mouse_genomes_project 14 28368400 28437845 + MGP_LPJ_P0038813 Wapl protein_coding protein_coding MGP_LPJ_T0038814.1 MGP_LPJ_G0021072.1 mouse_genomes_project 14 28389216 28438110 + Wapl protein_coding processed_transcript MGP_LPJ_T0038815.1 MGP_LPJ_G0021072.1 mouse_genomes_project 14 28417110 28438112 + MGP_LPJ_P0038815 Wapl protein_coding protein_coding MGP_LPJ_T0038816.1 MGP_LPJ_G0021072.1 mouse_genomes_project 14 28427760 28433077 + MGP_LPJ_P0038816 Wapl protein_coding protein_coding MGP_LPJ_T0039537.1 MGP_LPJ_G0021305.1 mouse_genomes_project 14 52186729 52189283 + MGP_LPJ_P0039537 protein_coding protein_coding MGP_LPJ_T0101888.1 MGP_LPJ_G0039925.1 mouse_genomes_project 14 123457908 123458193 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0039744.1 MGP_LPJ_G0021389.1 mouse_genomes_project 14 61246909 61304902 + MGP_LPJ_P0039744 Nuggc protein_coding protein_coding MGP_LPJ_T0039745.1 MGP_LPJ_G0021389.1 mouse_genomes_project 14 61254835 61304815 + MGP_LPJ_P0039745 Nuggc protein_coding protein_coding MGP_LPJ_T0012972.1 MGP_LPJ_G0011063.1 mouse_genomes_project 14 19020906 19021153 - processed_pseudogene processed_pseudogene MGP_LPJ_T0039405.1 MGP_LPJ_G0021256.1 mouse_genomes_project 14 50657669 50660893 + MGP_LPJ_P0039405 Psme1 protein_coding protein_coding MGP_LPJ_T0039406.1 MGP_LPJ_G0021256.1 mouse_genomes_project 14 50657906 50661075 + MGP_LPJ_P0039406 Psme1 protein_coding protein_coding MGP_LPJ_T0039407.1 MGP_LPJ_G0021256.1 mouse_genomes_project 14 50657951 50660189 + Psme1 protein_coding retained_intron MGP_LPJ_T0039408.1 MGP_LPJ_G0021256.1 mouse_genomes_project 14 50658002 50661075 + Psme1 protein_coding retained_intron MGP_LPJ_T0039409.1 MGP_LPJ_G0021256.1 mouse_genomes_project 14 50658014 50660921 + Psme1 protein_coding retained_intron MGP_LPJ_T0039410.1 MGP_LPJ_G0021256.1 mouse_genomes_project 14 50658032 50659950 + Psme1 protein_coding retained_intron MGP_LPJ_T0039411.1 MGP_LPJ_G0021256.1 mouse_genomes_project 14 50658084 50660489 + MGP_LPJ_P0039411 Psme1 protein_coding protein_coding MGP_LPJ_T0039412.1 MGP_LPJ_G0021256.1 mouse_genomes_project 14 50658121 50660928 + MGP_LPJ_P0039412 Psme1 protein_coding protein_coding MGP_LPJ_T0039413.1 MGP_LPJ_G0021256.1 mouse_genomes_project 14 50658121 50660928 + MGP_LPJ_P0039413 Psme1 protein_coding protein_coding MGP_LPJ_T0039414.1 MGP_LPJ_G0021256.1 mouse_genomes_project 14 50659510 50660998 + Psme1 protein_coding retained_intron MGP_LPJ_T0039415.1 MGP_LPJ_G0021256.1 mouse_genomes_project 14 50659580 50660494 + Psme1 protein_coding retained_intron MGP_LPJ_T0039416.1 MGP_LPJ_G0021256.1 mouse_genomes_project 14 50660294 50661076 + MGP_LPJ_P0039416 Psme1 protein_coding nonsense_mediated_decay MGP_LPJ_T0039834.1 MGP_LPJ_G0021419.1 mouse_genomes_project 14 64441719 64500468 - MGP_LPJ_P0039834 Adam28 protein_coding protein_coding MGP_LPJ_T0039835.1 MGP_LPJ_G0021419.1 mouse_genomes_project 14 64442569 64500468 - MGP_LPJ_P0039835 Adam28 protein_coding protein_coding MGP_LPJ_T0009997.1 MGP_LPJ_G0008115.1 mouse_genomes_project 14 28591019 28591117 + Mir346 miRNA miRNA MGP_LPJ_T0002649.1 MGP_LPJ_G0002538.1 mouse_genomes_project 14 47832878 47833518 + MGP_LPJ_P0002649 TR_V_gene TR_V_gene MGP_LPJ_T0100305.1 MGP_LPJ_G0038568.1 mouse_genomes_project 14 3645406 3645538 + Gm25466 snoRNA snoRNA MGP_LPJ_T0038880.1 MGP_LPJ_G0021099.1 mouse_genomes_project 14 39238599 39258337 + MGP_LPJ_P0038880 Psmc6 protein_coding protein_coding MGP_LPJ_T0099089.1 MGP_LPJ_G0037352.1 mouse_genomes_project 14 103694637 103694768 - Gm23459 snRNA snRNA MGP_LPJ_T0002562.1 MGP_LPJ_G0002461.1 mouse_genomes_project 14 49147800 49147860 + MGP_LPJ_P0002562 Traj26 TR_J_gene TR_J_gene MGP_LPJ_T0002747.1 MGP_LPJ_G0002619.1 mouse_genomes_project 14 48697752 48698424 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0006713.1 MGP_LPJ_G0005550.1 mouse_genomes_project 14 45872571 45882874 + lincRNA lincRNA MGP_LPJ_T0006714.1 MGP_LPJ_G0005550.1 mouse_genomes_project 14 45872635 45882746 + lincRNA lincRNA MGP_LPJ_T0040256.1 MGP_LPJ_G0021578.1 mouse_genomes_project 14 121637066 121737253 - MGP_LPJ_P0040256 Ggact protein_coding protein_coding MGP_LPJ_T0040259.1 MGP_LPJ_G0021578.1 mouse_genomes_project 14 121713542 121737295 - MGP_LPJ_P0040259 Ggact protein_coding protein_coding MGP_LPJ_T0040260.1 MGP_LPJ_G0021578.1 mouse_genomes_project 14 121713553 121714378 - MGP_LPJ_P0040260 Ggact protein_coding protein_coding MGP_LPJ_T0040261.1 MGP_LPJ_G0021578.1 mouse_genomes_project 14 121714107 121737890 - MGP_LPJ_P0040261 Ggact protein_coding protein_coding MGP_LPJ_T0040262.1 MGP_LPJ_G0021578.1 mouse_genomes_project 14 121714156 121737218 - MGP_LPJ_P0040262 Ggact protein_coding protein_coding MGP_LPJ_T0038445.1 MGP_LPJ_G0020968.1 mouse_genomes_project 14 18924395 18977977 - MGP_LPJ_P0038445 Zcchc24 protein_coding protein_coding MGP_LPJ_T0038446.1 MGP_LPJ_G0020968.1 mouse_genomes_project 14 18924397 18932563 - Zcchc24 protein_coding retained_intron MGP_LPJ_T0099093.1 MGP_LPJ_G0037356.1 mouse_genomes_project 14 113459521 113459627 - Gm24073 snRNA snRNA MGP_LPJ_T0006694.1 MGP_LPJ_G0005537.1 mouse_genomes_project 14 26265146 26267018 + Gm28651 lincRNA lincRNA MGP_LPJ_T0039797.1 MGP_LPJ_G0021406.1 mouse_genomes_project 14 62610197 62612341 + MGP_LPJ_P0039797 Gm5464 protein_coding protein_coding MGP_LPJ_T0002656.1 MGP_LPJ_G0002545.1 mouse_genomes_project 14 48130484 48131016 + MGP_LPJ_P0002656 TR_V_gene TR_V_gene MGP_LPJ_T0002738.1 MGP_LPJ_G0002610.1 mouse_genomes_project 14 47635992 47636261 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0039810.1 MGP_LPJ_G0021410.1 mouse_genomes_project 14 63012956 63217299 + MGP_LPJ_P0039810 Ebf2 protein_coding protein_coding MGP_LPJ_T0039811.1 MGP_LPJ_G0021410.1 mouse_genomes_project 14 63013250 63218440 + MGP_LPJ_P0039811 Ebf2 protein_coding protein_coding MGP_LPJ_T0039812.1 MGP_LPJ_G0021410.1 mouse_genomes_project 14 63013267 63016180 + Ebf2 protein_coding retained_intron MGP_LPJ_T0039813.1 MGP_LPJ_G0021410.1 mouse_genomes_project 14 63014308 63216209 + MGP_LPJ_P0039813 Ebf2 protein_coding protein_coding MGP_LPJ_T0010025.1 MGP_LPJ_G0008143.1 mouse_genomes_project 14 94018585 94018690 - Gm27441 miRNA miRNA MGP_LPJ_T0039602.1 MGP_LPJ_G0021326.1 mouse_genomes_project 14 54545872 54726052 - MGP_LPJ_P0039602 Phf11c protein_coding protein_coding MGP_LPJ_T0010019.1 MGP_LPJ_G0008137.1 mouse_genomes_project 14 65538152 65538225 + Mir6950 miRNA miRNA MGP_LPJ_T0040047.1 MGP_LPJ_G0021497.1 mouse_genomes_project 14 75497402 75513663 - MGP_LPJ_P0040047 Rgcc protein_coding protein_coding MGP_LPJ_T0010009.1 MGP_LPJ_G0008127.1 mouse_genomes_project 14 57055965 57056058 - Mir16-1 miRNA miRNA MGP_LPJ_T0038654.1 MGP_LPJ_G0021019.1 mouse_genomes_project 14 24764591 24830326 - MGP_LPJ_P0038654 Dnah1 protein_coding protein_coding MGP_LPJ_T0012969.1 MGP_LPJ_G0011060.1 mouse_genomes_project 14 11872607 11873989 - processed_pseudogene processed_pseudogene MGP_LPJ_T0039267.1 MGP_LPJ_G0021216.1 mouse_genomes_project 14 49433039 49437348 + MGP_LPJ_P0039267 Rem2 protein_coding protein_coding MGP_LPJ_T0039268.1 MGP_LPJ_G0021216.1 mouse_genomes_project 14 49433180 49434835 + Rem2 protein_coding retained_intron MGP_LPJ_T0039269.1 MGP_LPJ_G0021216.1 mouse_genomes_project 14 49433192 49436594 + MGP_LPJ_P0039269 Rem2 protein_coding protein_coding MGP_LPJ_T0039270.1 MGP_LPJ_G0021216.1 mouse_genomes_project 14 49434411 49436032 + MGP_LPJ_P0039270 Rem2 protein_coding protein_coding MGP_LPJ_T0010006.1 MGP_LPJ_G0008124.1 mouse_genomes_project 14 51200568 51200636 - Mir6949 miRNA miRNA MGP_LPJ_T0039517.1 MGP_LPJ_G0021295.1 mouse_genomes_project 14 51373281 51379978 - MGP_LPJ_P0039517 Gzmc protein_coding protein_coding MGP_LPJ_T0039827.1 MGP_LPJ_G0021414.1 mouse_genomes_project 14 63550576 63741565 - MGP_LPJ_P0039827 Dock5 protein_coding protein_coding MGP_LPJ_T0100329.1 MGP_LPJ_G0038592.1 mouse_genomes_project 14 58136980 58137112 - Gm23816 snoRNA snoRNA MGP_LPJ_T0038159.1 MGP_LPJ_G0020886.1 mouse_genomes_project 14 271949 301957 - MGP_LPJ_P0038159 Dnase1l3 protein_coding protein_coding MGP_LPJ_T0038160.1 MGP_LPJ_G0020886.1 mouse_genomes_project 14 283412 284754 - Dnase1l3 protein_coding processed_transcript MGP_LPJ_T0039581.1 MGP_LPJ_G0021321.1 mouse_genomes_project 14 53176695 53265468 - MGP_LPJ_P0039581 Micu2 protein_coding protein_coding MGP_LPJ_T0101867.1 MGP_LPJ_G0039904.1 mouse_genomes_project 14 11545038 11545186 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0009991.1 MGP_LPJ_G0008109.1 mouse_genomes_project 14 18742690 18742775 + Mir3075 miRNA miRNA MGP_LPJ_T0099085.1 MGP_LPJ_G0037348.1 mouse_genomes_project 14 97922188 97922289 - Gm23538 snRNA snRNA MGP_LPJ_T0099078.1 MGP_LPJ_G0037341.1 mouse_genomes_project 14 89885954 89886114 - Gm23509 snRNA snRNA MGP_LPJ_T0006749.1 MGP_LPJ_G0005577.1 mouse_genomes_project 14 116975127 116996406 + Gm26791 lincRNA lincRNA MGP_LPJ_T0040276.1 MGP_LPJ_G0021582.1 mouse_genomes_project 14 122818893 123557041 - MGP_LPJ_P0040276 Fgf14 protein_coding protein_coding MGP_LPJ_T0040277.1 MGP_LPJ_G0021582.1 mouse_genomes_project 14 122819277 123040349 - MGP_LPJ_P0040277 Fgf14 protein_coding protein_coding MGP_LPJ_T0100323.1 MGP_LPJ_G0038586.1 mouse_genomes_project 14 50215118 50215250 - Gm23596 snoRNA snoRNA MGP_LPJ_T0013021.1 MGP_LPJ_G0011112.1 mouse_genomes_project 14 70688655 70705434 + processed_pseudogene processed_pseudogene MGP_LPJ_T0039033.1 MGP_LPJ_G0021149.1 mouse_genomes_project 14 44838188 44839361 + MGP_LPJ_P0039033 Olfr745 protein_coding protein_coding MGP_LPJ_T0038865.1 MGP_LPJ_G0021095.1 mouse_genomes_project 14 38899160 38913840 + MGP_LPJ_P0038865 Ptger2 protein_coding protein_coding MGP_LPJ_T0009987.1 MGP_LPJ_G0008105.1 mouse_genomes_project 14 10862243 10862322 + Gm44469 miRNA miRNA MGP_LPJ_T0039852.1 MGP_LPJ_G0021431.1 mouse_genomes_project 14 65952246 65954958 + MGP_LPJ_P0039852 Egr3 protein_coding protein_coding MGP_LPJ_T0013040.1 MGP_LPJ_G0011131.1 mouse_genomes_project 14 121282579 121290269 - processed_pseudogene processed_pseudogene MGP_LPJ_T0038986.1 MGP_LPJ_G0021122.1 mouse_genomes_project 14 43156517 43220852 - MGP_LPJ_P0038986 Exoc5 protein_coding protein_coding MGP_LPJ_T0038987.1 MGP_LPJ_G0021122.1 mouse_genomes_project 14 43158123 43220595 - MGP_LPJ_P0038987 Exoc5 protein_coding protein_coding MGP_LPJ_T0038988.1 MGP_LPJ_G0021122.1 mouse_genomes_project 14 43159839 43164161 - Exoc5 protein_coding retained_intron MGP_LPJ_T0038989.1 MGP_LPJ_G0021122.1 mouse_genomes_project 14 43161121 43167639 - MGP_LPJ_P0038989 Exoc5 protein_coding nonsense_mediated_decay MGP_LPJ_T0038990.1 MGP_LPJ_G0021122.1 mouse_genomes_project 14 43161827 43167903 - Exoc5 protein_coding retained_intron MGP_LPJ_T0038991.1 MGP_LPJ_G0021122.1 mouse_genomes_project 14 43173945 43180528 - Exoc5 protein_coding retained_intron MGP_LPJ_T0038992.1 MGP_LPJ_G0021122.1 mouse_genomes_project 14 43179980 43196949 - MGP_LPJ_P0038992 Exoc5 protein_coding protein_coding MGP_LPJ_T0002529.1 MGP_LPJ_G0002432.1 mouse_genomes_project 14 49108531 49108593 + MGP_LPJ_P0002529 Traj59 TR_J_gene TR_J_gene MGP_LPJ_T0002530.1 MGP_LPJ_G0002432.1 mouse_genomes_project 14 49108531 49108595 + Traj59 TR_J_gene processed_transcript MGP_LPJ_T0002560.1 MGP_LPJ_G0002459.1 mouse_genomes_project 14 49144990 49145055 + MGP_LPJ_P0002560 Traj28 TR_J_gene TR_J_gene MGP_LPJ_T0038329.1 MGP_LPJ_G0020943.1 mouse_genomes_project 14 13668038 13688461 + MGP_LPJ_P0038329 Sec24c protein_coding protein_coding MGP_LPJ_T0038330.1 MGP_LPJ_G0020943.1 mouse_genomes_project 14 13668048 13688468 + MGP_LPJ_P0038330 Sec24c protein_coding unknown_likely_coding MGP_LPJ_T0002746.1 MGP_LPJ_G0002618.1 mouse_genomes_project 14 48697752 48698424 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0039524.1 MGP_LPJ_G0021300.1 mouse_genomes_project 14 51735786 51823752 + MGP_LPJ_P0039524 Parp4 protein_coding protein_coding MGP_LPJ_T0039525.1 MGP_LPJ_G0021300.1 mouse_genomes_project 14 51819292 51823750 + Parp4 protein_coding retained_intron MGP_LPJ_T0040192.1 MGP_LPJ_G0021551.1 mouse_genomes_project 14 116840693 116844733 - MGP_LPJ_P0040192 Sox21 protein_coding protein_coding MGP_LPJ_T0002634.1 MGP_LPJ_G0002524.1 mouse_genomes_project 14 47439682 47440274 + MGP_LPJ_P0002634 Trav7d-3 TR_V_gene TR_V_gene MGP_LPJ_T0011385.1 MGP_LPJ_G0009503.1 mouse_genomes_project 14 25568905 25569002 + Gm26045 misc_RNA misc_RNA MGP_LPJ_T0039243.1 MGP_LPJ_G0021210.1 mouse_genomes_project 14 49244811 49245842 - MGP_LPJ_P0039243 Olfr49 protein_coding protein_coding MGP_LPJ_T0038574.1 MGP_LPJ_G0021007.1 mouse_genomes_project 14 24487629 24489758 - MGP_LPJ_P0038574 Spcs1 protein_coding protein_coding MGP_LPJ_T0038575.1 MGP_LPJ_G0021007.1 mouse_genomes_project 14 24487629 24489821 - MGP_LPJ_P0038575 Spcs1 protein_coding protein_coding MGP_LPJ_T0038576.1 MGP_LPJ_G0021007.1 mouse_genomes_project 14 24487630 24489815 - MGP_LPJ_P0038576 Spcs1 protein_coding protein_coding MGP_LPJ_T0038577.1 MGP_LPJ_G0021007.1 mouse_genomes_project 14 24487630 24489512 - MGP_LPJ_P0038577 Spcs1 protein_coding protein_coding MGP_LPJ_T0038578.1 MGP_LPJ_G0021007.1 mouse_genomes_project 14 24487631 24489518 - Spcs1 protein_coding retained_intron MGP_LPJ_T0038579.1 MGP_LPJ_G0021007.1 mouse_genomes_project 14 24487890 24489499 - Spcs1 protein_coding retained_intron MGP_LPJ_T0038580.1 MGP_LPJ_G0021007.1 mouse_genomes_project 14 24488544 24489516 - MGP_LPJ_P0038580 Spcs1 protein_coding protein_coding MGP_LPJ_T0039769.1 MGP_LPJ_G0021398.1 mouse_genomes_project 14 61782554 61824697 - MGP_LPJ_P0039769 Ephx2 protein_coding protein_coding MGP_LPJ_T0039687.1 MGP_LPJ_G0021363.1 mouse_genomes_project 14 58641192 58664618 + MGP_LPJ_P0039687 Ctsb protein_coding protein_coding MGP_LPJ_T0006741.1 MGP_LPJ_G0005571.1 mouse_genomes_project 14 73600651 73635982 - Gm6994 lincRNA lincRNA MGP_LPJ_T0006742.1 MGP_LPJ_G0005571.1 mouse_genomes_project 14 73601275 73629648 - Gm6994 lincRNA lincRNA MGP_LPJ_T0017322.1 MGP_LPJ_G0015184.1 mouse_genomes_project 14 38777046 38869702 + processed_transcript processed_transcript MGP_LPJ_T0017323.1 MGP_LPJ_G0015184.1 mouse_genomes_project 14 38777329 38886443 + processed_transcript processed_transcript MGP_LPJ_T0039417.1 MGP_LPJ_G0021257.1 mouse_genomes_project 14 50661062 50665051 - MGP_LPJ_P0039417 Emc9 protein_coding protein_coding MGP_LPJ_T0039418.1 MGP_LPJ_G0021257.1 mouse_genomes_project 14 50661067 50661971 - Emc9 protein_coding retained_intron MGP_LPJ_T0039419.1 MGP_LPJ_G0021257.1 mouse_genomes_project 14 50661068 50665407 - MGP_LPJ_P0039419 Emc9 protein_coding protein_coding MGP_LPJ_T0039420.1 MGP_LPJ_G0021257.1 mouse_genomes_project 14 50663478 50665316 - Emc9 protein_coding retained_intron MGP_LPJ_T0039651.1 MGP_LPJ_G0021345.1 mouse_genomes_project 14 56721653 56723815 + MGP_LPJ_P0039651 Arl11 protein_coding protein_coding MGP_LPJ_T0003537.1 MGP_LPJ_G0003220.1 mouse_genomes_project 14 13533802 13552737 + 1810062O18Rik antisense antisense MGP_LPJ_T0003538.1 MGP_LPJ_G0003220.1 mouse_genomes_project 14 13533837 13558445 + 1810062O18Rik antisense antisense MGP_LPJ_T0003539.1 MGP_LPJ_G0003220.1 mouse_genomes_project 14 13533980 13552705 + 1810062O18Rik antisense antisense MGP_LPJ_T0003540.1 MGP_LPJ_G0003220.1 mouse_genomes_project 14 13534016 13558585 + 1810062O18Rik antisense antisense MGP_LPJ_T0003541.1 MGP_LPJ_G0003220.1 mouse_genomes_project 14 13552742 13558592 + 1810062O18Rik antisense antisense MGP_LPJ_T0039535.1 MGP_LPJ_G0021303.1 mouse_genomes_project 14 51959821 51982164 - MGP_LPJ_P0039535 Zmym5 protein_coding unknown_likely_coding MGP_LPJ_T0002563.1 MGP_LPJ_G0002462.1 mouse_genomes_project 14 49152752 49152809 + MGP_LPJ_P0002563 Traj25 TR_J_gene TR_J_gene MGP_LPJ_T0000946.1 MGP_LPJ_G0000874.1 mouse_genomes_project 14 50134201 50136383 - TEC TEC MGP_LPJ_T0038819.1 MGP_LPJ_G0021074.1 mouse_genomes_project 14 29523599 29526056 - MGP_LPJ_P0038819 4930596D02Rik protein_coding protein_coding MGP_LPJ_T0039741.1 MGP_LPJ_G0021386.1 mouse_genomes_project 14 60996698 61039586 + MGP_LPJ_P0039741 Zfp395 protein_coding protein_coding MGP_LPJ_T0039622.1 MGP_LPJ_G0021335.1 mouse_genomes_project 14 55454215 55466066 + MGP_LPJ_P0039622 4930563I02Rik protein_coding protein_coding MGP_LPJ_T0039623.1 MGP_LPJ_G0021335.1 mouse_genomes_project 14 55454661 55466076 + MGP_LPJ_P0039623 4930563I02Rik protein_coding protein_coding MGP_LPJ_T0039906.1 MGP_LPJ_G0021450.1 mouse_genomes_project 14 66540706 66552789 - MGP_LPJ_P0039906 Fgf17 protein_coding protein_coding MGP_LPJ_T0098172.1 MGP_LPJ_G0036453.1 mouse_genomes_project 14 117473161 117473284 - n-R5s51 rRNA rRNA MGP_LPJ_T0039907.1 MGP_LPJ_G0021451.1 mouse_genomes_project 14 66557829 66563610 - MGP_LPJ_P0039907 Npm2 protein_coding protein_coding MGP_LPJ_T0038200.1 MGP_LPJ_G0020899.1 mouse_genomes_project 14 4719536 4724358 - MGP_LPJ_P0038200 Fezf2 protein_coding protein_coding MGP_LPJ_T0039366.1 MGP_LPJ_G0021246.1 mouse_genomes_project 14 50158283 50168389 - MGP_LPJ_P0039366 Jph4 protein_coding protein_coding MGP_LPJ_T0039367.1 MGP_LPJ_G0021246.1 mouse_genomes_project 14 50158730 50167006 - MGP_LPJ_P0039367 Jph4 protein_coding protein_coding MGP_LPJ_T0039368.1 MGP_LPJ_G0021246.1 mouse_genomes_project 14 50161095 50162012 - Jph4 protein_coding retained_intron MGP_LPJ_T0039369.1 MGP_LPJ_G0021246.1 mouse_genomes_project 14 50162943 50168034 - Jph4 protein_coding retained_intron MGP_LPJ_T0040056.1 MGP_LPJ_G0021501.1 mouse_genomes_project 14 75683577 75706465 - MGP_LPJ_P0040056 Wbp4 protein_coding protein_coding MGP_LPJ_T0039016.1 MGP_LPJ_G0021135.1 mouse_genomes_project 14 44343981 44344938 - MGP_LPJ_P0039016 protein_coding protein_coding MGP_LPJ_T0040247.1 MGP_LPJ_G0021576.1 mouse_genomes_project 14 121318215 121319751 + MGP_LPJ_P0040247 Gm10837 protein_coding protein_coding MGP_LPJ_T0011387.1 MGP_LPJ_G0009505.1 mouse_genomes_project 14 34096681 34096860 - Gm22726 misc_RNA misc_RNA MGP_LPJ_T0038845.1 MGP_LPJ_G0021085.1 mouse_genomes_project 14 34755054 34823166 - MGP_LPJ_P0038845 Tspan14 protein_coding protein_coding MGP_LPJ_T0038846.1 MGP_LPJ_G0021085.1 mouse_genomes_project 14 34756664 34823202 - MGP_LPJ_P0038846 Tspan14 protein_coding unknown_likely_coding MGP_LPJ_T0002535.1 MGP_LPJ_G0002436.1 mouse_genomes_project 14 49115016 49115082 + MGP_LPJ_P0002535 Traj53 TR_J_gene TR_J_gene MGP_LPJ_T0009989.1 MGP_LPJ_G0008107.1 mouse_genomes_project 14 15088938 15089051 - Gm27532 miRNA miRNA MGP_LPJ_T0039514.1 MGP_LPJ_G0021292.1 mouse_genomes_project 14 51277847 51289171 - MGP_LPJ_P0039514 Gzmg protein_coding protein_coding MGP_LPJ_T0006716.1 MGP_LPJ_G0005552.1 mouse_genomes_project 14 46825179 46842385 + Gm26590 lincRNA lincRNA MGP_LPJ_T0038170.1 MGP_LPJ_G0020892.1 mouse_genomes_project 14 546946 583635 - MGP_LPJ_P0038170 Acox2 protein_coding protein_coding MGP_LPJ_T0038171.1 MGP_LPJ_G0020892.1 mouse_genomes_project 14 546946 584156 - MGP_LPJ_P0038171 Acox2 protein_coding protein_coding MGP_LPJ_T0038172.1 MGP_LPJ_G0020892.1 mouse_genomes_project 14 562567 569538 - Acox2 protein_coding processed_transcript MGP_LPJ_T0038173.1 MGP_LPJ_G0020892.1 mouse_genomes_project 14 566708 569565 - Acox2 protein_coding retained_intron MGP_LPJ_T0038174.1 MGP_LPJ_G0020892.1 mouse_genomes_project 14 571009 578279 - Acox2 protein_coding retained_intron MGP_LPJ_T0038175.1 MGP_LPJ_G0020892.1 mouse_genomes_project 14 578298 582668 - MGP_LPJ_P0038175 Acox2 protein_coding protein_coding MGP_LPJ_T0038176.1 MGP_LPJ_G0020892.1 mouse_genomes_project 14 579949 582951 - Acox2 protein_coding processed_transcript MGP_LPJ_T0038177.1 MGP_LPJ_G0020892.1 mouse_genomes_project 14 580719 581731 - Acox2 protein_coding retained_intron MGP_LPJ_T0039758.1 MGP_LPJ_G0021395.1 mouse_genomes_project 14 61650602 61665487 + MGP_LPJ_P0039758 Clu protein_coding protein_coding MGP_LPJ_T0039759.1 MGP_LPJ_G0021395.1 mouse_genomes_project 14 61650761 61659546 + MGP_LPJ_P0039759 Clu protein_coding nonsense_mediated_decay MGP_LPJ_T0039760.1 MGP_LPJ_G0021395.1 mouse_genomes_project 14 61650773 61654655 + Clu protein_coding retained_intron MGP_LPJ_T0039761.1 MGP_LPJ_G0021395.1 mouse_genomes_project 14 61651837 61659861 + MGP_LPJ_P0039761 Clu protein_coding protein_coding MGP_LPJ_T0039762.1 MGP_LPJ_G0021395.1 mouse_genomes_project 14 61652739 61659765 + MGP_LPJ_P0039762 Clu protein_coding protein_coding MGP_LPJ_T0039763.1 MGP_LPJ_G0021395.1 mouse_genomes_project 14 61652921 61659742 + MGP_LPJ_P0039763 Clu protein_coding protein_coding MGP_LPJ_T0039764.1 MGP_LPJ_G0021395.1 mouse_genomes_project 14 61653175 61659677 + MGP_LPJ_P0039764 Clu protein_coding protein_coding MGP_LPJ_T0039765.1 MGP_LPJ_G0021395.1 mouse_genomes_project 14 61653420 61657080 + MGP_LPJ_P0039765 Clu protein_coding protein_coding MGP_LPJ_T0039766.1 MGP_LPJ_G0021395.1 mouse_genomes_project 14 61656786 61659874 + Clu protein_coding retained_intron MGP_LPJ_T0099081.1 MGP_LPJ_G0037344.1 mouse_genomes_project 14 95679975 95680082 + Gm26139 snRNA snRNA MGP_LPJ_T0017344.1 MGP_LPJ_G0015188.1 mouse_genomes_project 14 63012102 63012794 - Gm20675 processed_transcript processed_transcript MGP_LPJ_T0039036.1 MGP_LPJ_G0021152.1 mouse_genomes_project 14 44933707 44934403 + MGP_LPJ_P0039036 protein_coding protein_coding MGP_LPJ_T0012985.1 MGP_LPJ_G0011076.1 mouse_genomes_project 14 39632577 39632739 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003584.1 MGP_LPJ_G0003254.1 mouse_genomes_project 14 59043140 59049314 + Gm17232 antisense antisense MGP_LPJ_T0010027.1 MGP_LPJ_G0008145.1 mouse_genomes_project 14 100285844 100285928 - Mir5130 miRNA miRNA MGP_LPJ_T0002564.1 MGP_LPJ_G0002463.1 mouse_genomes_project 14 49153579 49153642 + MGP_LPJ_P0002564 Traj24 TR_J_gene TR_J_gene MGP_LPJ_T0010028.1 MGP_LPJ_G0008146.1 mouse_genomes_project 14 100977052 100977157 - Gm22877 miRNA miRNA MGP_LPJ_T0038929.1 MGP_LPJ_G0021114.1 mouse_genomes_project 14 41317693 41344275 + MGP_LPJ_P0038929 Mapk1ip1l protein_coding protein_coding MGP_LPJ_T0038930.1 MGP_LPJ_G0021114.1 mouse_genomes_project 14 41327822 41344277 + MGP_LPJ_P0038930 Mapk1ip1l protein_coding protein_coding MGP_LPJ_T0039080.1 MGP_LPJ_G0021172.1 mouse_genomes_project 14 45388896 45390951 + MGP_LPJ_P0039080 Rnase6 protein_coding protein_coding MGP_LPJ_T0040194.1 MGP_LPJ_G0021553.1 mouse_genomes_project 14 117103811 117346909 - MGP_LPJ_P0040194 Abcc4 protein_coding protein_coding MGP_LPJ_T0040195.1 MGP_LPJ_G0021553.1 mouse_genomes_project 14 117103811 117346909 - MGP_LPJ_P0040195 Abcc4 protein_coding protein_coding MGP_LPJ_T0039606.1 MGP_LPJ_G0021330.1 mouse_genomes_project 14 54732771 54771467 - MGP_LPJ_P0039606 Setdb2 protein_coding protein_coding MGP_LPJ_T0039607.1 MGP_LPJ_G0021330.1 mouse_genomes_project 14 54732773 54771460 - MGP_LPJ_P0039607 Setdb2 protein_coding protein_coding MGP_LPJ_T0039608.1 MGP_LPJ_G0021330.1 mouse_genomes_project 14 54733026 54740631 - Setdb2 protein_coding retained_intron MGP_LPJ_T0039609.1 MGP_LPJ_G0021330.1 mouse_genomes_project 14 54753592 54771458 - MGP_LPJ_P0039609 Setdb2 protein_coding protein_coding MGP_LPJ_T0039610.1 MGP_LPJ_G0021330.1 mouse_genomes_project 14 54761728 54771456 - Setdb2 protein_coding processed_transcript MGP_LPJ_T0039494.1 MGP_LPJ_G0021276.1 mouse_genomes_project 14 50863567 50879467 - MGP_LPJ_P0039494 Adcy4 protein_coding unknown_likely_coding MGP_LPJ_T0002631.1 MGP_LPJ_G0002523.1 mouse_genomes_project 14 47418318 47419943 + MGP_LPJ_P0002631 TR_V_gene TR_V_gene MGP_LPJ_T0002632.1 MGP_LPJ_G0002523.1 mouse_genomes_project 14 47419636 47419943 + MGP_LPJ_P0002632 TR_V_gene TR_V_gene MGP_LPJ_T0038453.1 MGP_LPJ_G0020972.1 mouse_genomes_project 14 19103259 19106284 - MGP_LPJ_P0038453 protein_coding protein_coding MGP_LPJ_T0038454.1 MGP_LPJ_G0020972.1 mouse_genomes_project 14 19103642 19106169 - MGP_LPJ_P0038454 protein_coding protein_coding MGP_LPJ_T0039345.1 MGP_LPJ_G0021242.1 mouse_genomes_project 14 50067148 50075749 + MGP_LPJ_P0039345 Ngdn protein_coding protein_coding MGP_LPJ_T0038163.1 MGP_LPJ_G0020888.1 mouse_genomes_project 14 390134 401416 + MGP_LPJ_P0038163 protein_coding protein_coding MGP_LPJ_T0038164.1 MGP_LPJ_G0020888.1 mouse_genomes_project 14 399656 400133 + MGP_LPJ_P0038164 protein_coding protein_coding MGP_LPJ_T0006695.1 MGP_LPJ_G0005538.1 mouse_genomes_project 14 28450857 28460748 + A930038B10Rik lincRNA lincRNA MGP_LPJ_T0006696.1 MGP_LPJ_G0005538.1 mouse_genomes_project 14 28451682 28467956 + A930038B10Rik lincRNA lincRNA MGP_LPJ_T0038311.1 MGP_LPJ_G0020938.1 mouse_genomes_project 14 13467009 13480774 - MGP_LPJ_P0038311 Mss51 protein_coding protein_coding MGP_LPJ_T0017366.1 MGP_LPJ_G0015198.1 mouse_genomes_project 14 113894603 113908058 - 4930505G20Rik processed_transcript processed_transcript MGP_LPJ_T0010001.1 MGP_LPJ_G0008119.1 mouse_genomes_project 14 43739547 43739652 - Gm22949 miRNA miRNA MGP_LPJ_T0099061.1 MGP_LPJ_G0037324.1 mouse_genomes_project 14 43961144 43961230 + Gm22989 snRNA snRNA MGP_LPJ_T0039902.1 MGP_LPJ_G0021448.1 mouse_genomes_project 14 66480967 66500242 - MGP_LPJ_P0039902 Fam160b2 protein_coding protein_coding MGP_LPJ_T0002635.1 MGP_LPJ_G0002525.1 mouse_genomes_project 14 47448800 47449280 + MGP_LPJ_P0002635 Trav6d-4 TR_V_gene TR_V_gene MGP_LPJ_T0002636.1 MGP_LPJ_G0002525.1 mouse_genomes_project 14 47448831 47449280 + MGP_LPJ_P0002636 Trav6d-4 TR_V_gene TR_V_gene MGP_LPJ_T0003550.1 MGP_LPJ_G0003226.1 mouse_genomes_project 14 19071915 19085419 - Anxa11os antisense antisense MGP_LPJ_T0003596.1 MGP_LPJ_G0003265.1 mouse_genomes_project 14 120669969 120671509 - 1810041H14Rik antisense antisense MGP_LPJ_T0003597.1 MGP_LPJ_G0003265.1 mouse_genomes_project 14 120670055 120671743 - 1810041H14Rik antisense antisense MGP_LPJ_T0003598.1 MGP_LPJ_G0003265.1 mouse_genomes_project 14 120670103 120672648 - 1810041H14Rik antisense antisense MGP_LPJ_T0040216.1 MGP_LPJ_G0021558.1 mouse_genomes_project 14 117807178 118564965 + MGP_LPJ_P0040216 Hs6st3 protein_coding protein_coding MGP_LPJ_T0002557.1 MGP_LPJ_G0002456.1 mouse_genomes_project 14 49141269 49141326 + MGP_LPJ_P0002557 Traj31 TR_J_gene TR_J_gene MGP_LPJ_T0006669.1 MGP_LPJ_G0005522.1 mouse_genomes_project 14 5618194 5763486 - lincRNA lincRNA MGP_LPJ_T0006670.1 MGP_LPJ_G0005522.1 mouse_genomes_project 14 5619380 5636195 - lincRNA lincRNA MGP_LPJ_T0006671.1 MGP_LPJ_G0005522.1 mouse_genomes_project 14 5737594 5763478 - lincRNA lincRNA MGP_LPJ_T0101878.1 MGP_LPJ_G0039915.1 mouse_genomes_project 14 45515537 45516003 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0039149.1 MGP_LPJ_G0021193.1 mouse_genomes_project 14 46649753 46651660 - MGP_LPJ_P0039149 Olfr221 protein_coding protein_coding MGP_LPJ_T0039961.1 MGP_LPJ_G0021464.1 mouse_genomes_project 14 69482158 69486363 + Sucla2 protein_coding processed_transcript MGP_LPJ_T0039962.1 MGP_LPJ_G0021464.1 mouse_genomes_project 14 69482334 69523731 + MGP_LPJ_P0039962 Sucla2 protein_coding protein_coding MGP_LPJ_T0039963.1 MGP_LPJ_G0021464.1 mouse_genomes_project 14 69495952 69496542 + Sucla2 protein_coding retained_intron MGP_LPJ_T0039964.1 MGP_LPJ_G0021464.1 mouse_genomes_project 14 69517930 69518432 + Sucla2 protein_coding retained_intron MGP_LPJ_T0039965.1 MGP_LPJ_G0021464.1 mouse_genomes_project 14 69522998 69523722 + Sucla2 protein_coding processed_transcript MGP_LPJ_T0002637.1 MGP_LPJ_G0002526.1 mouse_genomes_project 14 47472910 47473550 + MGP_LPJ_P0002637 Trav7d-4 TR_V_gene TR_V_gene MGP_LPJ_T0002570.1 MGP_LPJ_G0002469.1 mouse_genomes_project 14 49158695 49158761 + MGP_LPJ_P0002570 Traj18 TR_J_gene TR_J_gene MGP_LPJ_T0099096.1 MGP_LPJ_G0037359.1 mouse_genomes_project 14 121206742 121206849 - Gm25464 snRNA snRNA MGP_LPJ_T0039234.1 MGP_LPJ_G0021208.1 mouse_genomes_project 14 49195069 49215730 - MGP_LPJ_P0039234 Dad1 protein_coding protein_coding MGP_LPJ_T0039235.1 MGP_LPJ_G0021208.1 mouse_genomes_project 14 49200222 49215540 - MGP_LPJ_P0039235 Dad1 protein_coding protein_coding MGP_LPJ_T0017347.1 MGP_LPJ_G0015191.1 mouse_genomes_project 14 63215189 63226629 - Gm10860 processed_transcript processed_transcript MGP_LPJ_T0039318.1 MGP_LPJ_G0021231.1 mouse_genomes_project 14 49847907 49851904 - Ppp1r3e protein_coding processed_transcript MGP_LPJ_T0039319.1 MGP_LPJ_G0021231.1 mouse_genomes_project 14 49847919 49856200 - MGP_LPJ_P0039319 Ppp1r3e protein_coding protein_coding MGP_LPJ_T0039320.1 MGP_LPJ_G0021231.1 mouse_genomes_project 14 49854244 49855271 - Ppp1r3e protein_coding TEC MGP_LPJ_T0039321.1 MGP_LPJ_G0021231.1 mouse_genomes_project 14 49854244 49856188 - MGP_LPJ_P0039321 Ppp1r3e protein_coding protein_coding MGP_LPJ_T0039058.1 MGP_LPJ_G0021162.1 mouse_genomes_project 14 45174364 45177927 - MGP_LPJ_P0039058 Tmem55b protein_coding protein_coding MGP_LPJ_T0039059.1 MGP_LPJ_G0021162.1 mouse_genomes_project 14 45174369 45178008 - MGP_LPJ_P0039059 Tmem55b protein_coding protein_coding MGP_LPJ_T0039060.1 MGP_LPJ_G0021162.1 mouse_genomes_project 14 45174371 45178003 - Tmem55b protein_coding retained_intron MGP_LPJ_T0039061.1 MGP_LPJ_G0021162.1 mouse_genomes_project 14 45175020 45176364 - MGP_LPJ_P0039061 Tmem55b protein_coding protein_coding MGP_LPJ_T0039062.1 MGP_LPJ_G0021162.1 mouse_genomes_project 14 45175980 45177955 - MGP_LPJ_P0039062 Tmem55b protein_coding protein_coding MGP_LPJ_T0039063.1 MGP_LPJ_G0021162.1 mouse_genomes_project 14 45176076 45177985 - Tmem55b protein_coding retained_intron MGP_LPJ_T0039064.1 MGP_LPJ_G0021162.1 mouse_genomes_project 14 45176178 45176918 - Tmem55b protein_coding retained_intron MGP_LPJ_T0039065.1 MGP_LPJ_G0021162.1 mouse_genomes_project 14 45176412 45177990 - Tmem55b protein_coding retained_intron MGP_LPJ_T0039066.1 MGP_LPJ_G0021162.1 mouse_genomes_project 14 45176489 45177952 - Tmem55b protein_coding retained_intron MGP_LPJ_T0099083.1 MGP_LPJ_G0037346.1 mouse_genomes_project 14 96454071 96454227 - Gm25130 snRNA snRNA MGP_LPJ_T0101870.1 MGP_LPJ_G0039907.1 mouse_genomes_project 14 19091806 19099490 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0039768.1 MGP_LPJ_G0021397.1 mouse_genomes_project 14 61720829 61775477 - MGP_LPJ_P0039768 Adam2 protein_coding protein_coding MGP_LPJ_T0039088.1 MGP_LPJ_G0021178.1 mouse_genomes_project 14 45571647 45578260 + MGP_LPJ_P0039088 Ang5 protein_coding protein_coding MGP_LPJ_T0039089.1 MGP_LPJ_G0021178.1 mouse_genomes_project 14 45577660 45578098 + MGP_LPJ_P0039089 Ang5 protein_coding protein_coding MGP_LPJ_T0002522.1 MGP_LPJ_G0002425.1 mouse_genomes_project 14 49081510 49081526 + MGP_LPJ_P0002522 Trdd2 TR_D_gene TR_D_gene MGP_LPJ_T0002549.1 MGP_LPJ_G0002448.1 mouse_genomes_project 14 49131367 49131428 + MGP_LPJ_P0002549 Traj40 TR_J_gene TR_J_gene MGP_LPJ_T0099045.1 MGP_LPJ_G0037308.1 mouse_genomes_project 14 6398805 6398902 + Gm25964 snRNA snRNA MGP_LPJ_T0038876.1 MGP_LPJ_G0021097.1 mouse_genomes_project 14 39121067 39125265 + Gpr137c protein_coding processed_transcript MGP_LPJ_T0038877.1 MGP_LPJ_G0021097.1 mouse_genomes_project 14 39121341 39184841 + MGP_LPJ_P0038877 Gpr137c protein_coding protein_coding MGP_LPJ_T0038878.1 MGP_LPJ_G0021097.1 mouse_genomes_project 14 39168483 39182866 + Gpr137c protein_coding retained_intron MGP_LPJ_T0039013.1 MGP_LPJ_G0021132.1 mouse_genomes_project 14 44236704 44237491 - MGP_LPJ_P0039013 protein_coding protein_coding MGP_LPJ_T0002604.1 MGP_LPJ_G0002501.1 mouse_genomes_project 14 49114362 49114416 + TR_J_pseudogene TR_J_pseudogene MGP_LPJ_T0039826.1 MGP_LPJ_G0021413.1 mouse_genomes_project 14 63543899 63548096 + MGP_LPJ_P0039826 Gnrh1 protein_coding protein_coding MGP_LPJ_T0002618.1 MGP_LPJ_G0002513.1 mouse_genomes_project 14 47071087 47072064 + MGP_LPJ_P0002618 Trav1 TR_V_gene TR_V_gene MGP_LPJ_T0002619.1 MGP_LPJ_G0002513.1 mouse_genomes_project 14 47071126 47072064 + MGP_LPJ_P0002619 Trav1 TR_V_gene TR_V_gene MGP_LPJ_T0039767.1 MGP_LPJ_G0021396.1 mouse_genomes_project 14 61670725 61699509 - MGP_LPJ_P0039767 Gulo protein_coding protein_coding MGP_LPJ_T0039374.1 MGP_LPJ_G0021250.1 mouse_genomes_project 14 50579053 50586058 + MGP_LPJ_P0039374 Cpne6 protein_coding protein_coding MGP_LPJ_T0039375.1 MGP_LPJ_G0021250.1 mouse_genomes_project 14 50579056 50586058 + MGP_LPJ_P0039375 Cpne6 protein_coding protein_coding MGP_LPJ_T0039376.1 MGP_LPJ_G0021250.1 mouse_genomes_project 14 50579083 50586057 + Cpne6 protein_coding retained_intron MGP_LPJ_T0039377.1 MGP_LPJ_G0021250.1 mouse_genomes_project 14 50579205 50582321 + MGP_LPJ_P0039377 Cpne6 protein_coding nonsense_mediated_decay MGP_LPJ_T0039378.1 MGP_LPJ_G0021250.1 mouse_genomes_project 14 50579919 50586058 + Cpne6 protein_coding retained_intron MGP_LPJ_T0039379.1 MGP_LPJ_G0021250.1 mouse_genomes_project 14 50579968 50586058 + MGP_LPJ_P0039379 Cpne6 protein_coding protein_coding MGP_LPJ_T0039380.1 MGP_LPJ_G0021250.1 mouse_genomes_project 14 50580593 50586056 + MGP_LPJ_P0039380 Cpne6 protein_coding protein_coding MGP_LPJ_T0000938.1 MGP_LPJ_G0000866.1 mouse_genomes_project 14 14984663 15004930 + TEC TEC MGP_LPJ_T0038644.1 MGP_LPJ_G0021016.1 mouse_genomes_project 14 24718681 24731477 + MGP_LPJ_P0038644 Sema3g protein_coding protein_coding MGP_LPJ_T0039030.1 MGP_LPJ_G0021146.1 mouse_genomes_project 14 44657747 44658683 + MGP_LPJ_P0039030 Olfr740 protein_coding protein_coding MGP_LPJ_T0099057.1 MGP_LPJ_G0037320.1 mouse_genomes_project 14 42811977 42812084 - Gm25380 snRNA snRNA MGP_LPJ_T0013015.1 MGP_LPJ_G0011106.1 mouse_genomes_project 14 58973293 58974291 - processed_pseudogene processed_pseudogene MGP_LPJ_T0039044.1 MGP_LPJ_G0021158.1 mouse_genomes_project 14 45125025 45126892 - MGP_LPJ_P0039044 Klhl33 protein_coding protein_coding MGP_LPJ_T0039742.1 MGP_LPJ_G0021387.1 mouse_genomes_project 14 61041336 61068263 - MGP_LPJ_P0039742 Pnoc protein_coding protein_coding MGP_LPJ_T0002692.1 MGP_LPJ_G0002574.1 mouse_genomes_project 14 48791666 48792260 + MGP_LPJ_P0002692 Trav19 TR_V_gene TR_V_gene MGP_LPJ_T0101883.1 MGP_LPJ_G0039920.1 mouse_genomes_project 14 45702002 45702465 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0039271.1 MGP_LPJ_G0021217.1 mouse_genomes_project 14 49473062 49485205 - MGP_LPJ_P0039271 Prmt5 protein_coding protein_coding MGP_LPJ_T0039272.1 MGP_LPJ_G0021217.1 mouse_genomes_project 14 49476877 49479333 - MGP_LPJ_P0039272 Prmt5 protein_coding protein_coding MGP_LPJ_T0039273.1 MGP_LPJ_G0021217.1 mouse_genomes_project 14 49477082 49485115 - MGP_LPJ_P0039273 Prmt5 protein_coding nonsense_mediated_decay MGP_LPJ_T0039274.1 MGP_LPJ_G0021217.1 mouse_genomes_project 14 49479249 49485073 - Prmt5 protein_coding retained_intron MGP_LPJ_T0039275.1 MGP_LPJ_G0021217.1 mouse_genomes_project 14 49479814 49485150 - Prmt5 protein_coding retained_intron MGP_LPJ_T0039276.1 MGP_LPJ_G0021217.1 mouse_genomes_project 14 49483830 49485041 - Prmt5 protein_coding processed_transcript MGP_LPJ_T0038403.1 MGP_LPJ_G0020961.1 mouse_genomes_project 14 16412495 16955404 - MGP_LPJ_P0038403 Kcnma1 protein_coding protein_coding MGP_LPJ_T0038404.1 MGP_LPJ_G0020961.1 mouse_genomes_project 14 16412495 16955404 - MGP_LPJ_P0038404 Kcnma1 protein_coding protein_coding MGP_LPJ_T0038405.1 MGP_LPJ_G0020961.1 mouse_genomes_project 14 16421758 16955404 - MGP_LPJ_P0038405 Kcnma1 protein_coding protein_coding MGP_LPJ_T0038406.1 MGP_LPJ_G0020961.1 mouse_genomes_project 14 16421758 16955404 - MGP_LPJ_P0038406 Kcnma1 protein_coding protein_coding MGP_LPJ_T0038407.1 MGP_LPJ_G0020961.1 mouse_genomes_project 14 16421758 16955404 - MGP_LPJ_P0038407 Kcnma1 protein_coding protein_coding MGP_LPJ_T0038408.1 MGP_LPJ_G0020961.1 mouse_genomes_project 14 16422445 17162502 - MGP_LPJ_P0038408 Kcnma1 protein_coding protein_coding MGP_LPJ_T0038409.1 MGP_LPJ_G0020961.1 mouse_genomes_project 14 16422459 16796643 - MGP_LPJ_P0038409 Kcnma1 protein_coding protein_coding MGP_LPJ_T0038410.1 MGP_LPJ_G0020961.1 mouse_genomes_project 14 16422459 17163156 - MGP_LPJ_P0038410 Kcnma1 protein_coding protein_coding MGP_LPJ_T0038411.1 MGP_LPJ_G0020961.1 mouse_genomes_project 14 16422459 16955404 - MGP_LPJ_P0038411 Kcnma1 protein_coding protein_coding MGP_LPJ_T0038412.1 MGP_LPJ_G0020961.1 mouse_genomes_project 14 16423753 17162502 - MGP_LPJ_P0038412 Kcnma1 protein_coding protein_coding MGP_LPJ_T0038413.1 MGP_LPJ_G0020961.1 mouse_genomes_project 14 16423753 17162274 - MGP_LPJ_P0038413 Kcnma1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038414.1 MGP_LPJ_G0020961.1 mouse_genomes_project 14 16423883 17162422 - MGP_LPJ_P0038414 Kcnma1 protein_coding protein_coding MGP_LPJ_T0038415.1 MGP_LPJ_G0020961.1 mouse_genomes_project 14 16433499 16955404 - MGP_LPJ_P0038415 Kcnma1 protein_coding protein_coding MGP_LPJ_T0038416.1 MGP_LPJ_G0020961.1 mouse_genomes_project 14 16433499 16955404 - MGP_LPJ_P0038416 Kcnma1 protein_coding protein_coding MGP_LPJ_T0038417.1 MGP_LPJ_G0020961.1 mouse_genomes_project 14 17160952 17162595 - MGP_LPJ_P0038417 Kcnma1 protein_coding protein_coding MGP_LPJ_T0009999.1 MGP_LPJ_G0008117.1 mouse_genomes_project 14 39571506 39571599 - Mir5131 miRNA miRNA MGP_LPJ_T0038183.1 MGP_LPJ_G0020895.1 mouse_genomes_project 14 764032 999595 - MGP_LPJ_P0038183 4930452B06Rik protein_coding protein_coding MGP_LPJ_T0002520.1 MGP_LPJ_G0002424.1 mouse_genomes_project 14 49072758 49072767 + MGP_LPJ_P0002520 Trdd1 TR_D_gene TR_D_gene MGP_LPJ_T0002521.1 MGP_LPJ_G0002424.1 mouse_genomes_project 14 49072758 49072769 + Trdd1 TR_D_gene processed_transcript MGP_LPJ_T0099069.1 MGP_LPJ_G0037332.1 mouse_genomes_project 14 52027308 52027367 - Gm22218 snRNA snRNA MGP_LPJ_T0039042.1 MGP_LPJ_G0021156.1 mouse_genomes_project 14 45037420 45052032 + MGP_LPJ_P0039042 Parp2 protein_coding protein_coding MGP_LPJ_T0038663.1 MGP_LPJ_G0021023.1 mouse_genomes_project 14 25009612 25024392 + MGP_LPJ_P0038663 Eaf1 protein_coding protein_coding MGP_LPJ_T0038293.1 MGP_LPJ_G0020932.1 mouse_genomes_project 14 13284761 13315340 - MGP_LPJ_P0038293 Ecd protein_coding protein_coding MGP_LPJ_T0101877.1 MGP_LPJ_G0039914.1 mouse_genomes_project 14 45515537 45516002 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0009996.1 MGP_LPJ_G0008114.1 mouse_genomes_project 14 24021864 24021924 + Mir3076 miRNA miRNA MGP_LPJ_T0006698.1 MGP_LPJ_G0005540.1 mouse_genomes_project 14 39580158 39582034 - A530076I17Rik lincRNA lincRNA MGP_LPJ_T0039490.1 MGP_LPJ_G0021273.1 mouse_genomes_project 14 50846811 50851191 - MGP_LPJ_P0039490 Cideb protein_coding protein_coding MGP_LPJ_T0039491.1 MGP_LPJ_G0021273.1 mouse_genomes_project 14 50847424 50851112 - Cideb protein_coding retained_intron MGP_LPJ_T0039928.1 MGP_LPJ_G0021457.1 mouse_genomes_project 14 69052970 69069453 + Rcbtb2 protein_coding retained_intron MGP_LPJ_T0039929.1 MGP_LPJ_G0021457.1 mouse_genomes_project 14 69052970 69076492 + MGP_LPJ_P0039929 Rcbtb2 protein_coding protein_coding MGP_LPJ_T0039930.1 MGP_LPJ_G0021457.1 mouse_genomes_project 14 69056730 69078881 + MGP_LPJ_P0039930 Rcbtb2 protein_coding protein_coding MGP_LPJ_T0039931.1 MGP_LPJ_G0021457.1 mouse_genomes_project 14 69056752 69080681 + MGP_LPJ_P0039931 Rcbtb2 protein_coding protein_coding MGP_LPJ_T0039932.1 MGP_LPJ_G0021457.1 mouse_genomes_project 14 69056901 69069452 + Rcbtb2 protein_coding retained_intron MGP_LPJ_T0039933.1 MGP_LPJ_G0021457.1 mouse_genomes_project 14 69056917 69076543 + MGP_LPJ_P0039933 Rcbtb2 protein_coding protein_coding MGP_LPJ_T0039934.1 MGP_LPJ_G0021457.1 mouse_genomes_project 14 69057057 69114577 + MGP_LPJ_P0039934 Rcbtb2 protein_coding protein_coding MGP_LPJ_T0039935.1 MGP_LPJ_G0021457.1 mouse_genomes_project 14 69057186 69078945 + MGP_LPJ_P0039935 Rcbtb2 protein_coding protein_coding MGP_LPJ_T0039936.1 MGP_LPJ_G0021457.1 mouse_genomes_project 14 69057203 69078239 + Rcbtb2 protein_coding retained_intron MGP_LPJ_T0039937.1 MGP_LPJ_G0021457.1 mouse_genomes_project 14 69057211 69069023 + Rcbtb2 protein_coding retained_intron MGP_LPJ_T0039938.1 MGP_LPJ_G0021457.1 mouse_genomes_project 14 69057256 69098238 + MGP_LPJ_P0039938 Rcbtb2 protein_coding protein_coding MGP_LPJ_T0039939.1 MGP_LPJ_G0021457.1 mouse_genomes_project 14 69057270 69097353 + MGP_LPJ_P0039939 Rcbtb2 protein_coding protein_coding MGP_LPJ_T0039940.1 MGP_LPJ_G0021457.1 mouse_genomes_project 14 69057293 69098409 + MGP_LPJ_P0039940 Rcbtb2 protein_coding protein_coding MGP_LPJ_T0039941.1 MGP_LPJ_G0021457.1 mouse_genomes_project 14 69057304 69069406 + Rcbtb2 protein_coding retained_intron MGP_LPJ_T0039942.1 MGP_LPJ_G0021457.1 mouse_genomes_project 14 69057304 69081014 + MGP_LPJ_P0039942 Rcbtb2 protein_coding protein_coding MGP_LPJ_T0039943.1 MGP_LPJ_G0021457.1 mouse_genomes_project 14 69057351 69079012 + MGP_LPJ_P0039943 Rcbtb2 protein_coding protein_coding MGP_LPJ_T0039944.1 MGP_LPJ_G0021457.1 mouse_genomes_project 14 69057370 69096786 + MGP_LPJ_P0039944 Rcbtb2 protein_coding protein_coding MGP_LPJ_T0039945.1 MGP_LPJ_G0021457.1 mouse_genomes_project 14 69057594 69076123 + MGP_LPJ_P0039945 Rcbtb2 protein_coding protein_coding MGP_LPJ_T0039946.1 MGP_LPJ_G0021457.1 mouse_genomes_project 14 69076093 69096789 + MGP_LPJ_P0039946 Rcbtb2 protein_coding nonsense_mediated_decay MGP_LPJ_T0039947.1 MGP_LPJ_G0021457.1 mouse_genomes_project 14 69076093 69096786 + MGP_LPJ_P0039947 Rcbtb2 protein_coding nonsense_mediated_decay MGP_LPJ_T0039948.1 MGP_LPJ_G0021457.1 mouse_genomes_project 14 69088079 69096705 + MGP_LPJ_P0039948 Rcbtb2 protein_coding protein_coding MGP_LPJ_T0039949.1 MGP_LPJ_G0021457.1 mouse_genomes_project 14 69088640 69096869 + Rcbtb2 protein_coding retained_intron MGP_LPJ_T0101269.1 MGP_LPJ_G0039505.1 mouse_genomes_project 14 50090173 50094606 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101270.1 MGP_LPJ_G0039505.1 mouse_genomes_project 14 50093450 50094429 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0039283.1 MGP_LPJ_G0021224.1 mouse_genomes_project 14 49600566 49601017 + MGP_LPJ_P0039283 Gm20726 protein_coding protein_coding MGP_LPJ_T0006739.1 MGP_LPJ_G0005569.1 mouse_genomes_project 14 71105890 71106533 - Gm15628 lincRNA lincRNA MGP_LPJ_T0039017.1 MGP_LPJ_G0021136.1 mouse_genomes_project 14 44410377 44411358 - MGP_LPJ_P0039017 Olfr731 protein_coding protein_coding MGP_LPJ_T0038168.1 MGP_LPJ_G0020891.1 mouse_genomes_project 14 535721 545115 + MGP_LPJ_P0038168 Kctd6 protein_coding protein_coding MGP_LPJ_T0038169.1 MGP_LPJ_G0020891.1 mouse_genomes_project 14 536069 545109 + MGP_LPJ_P0038169 Kctd6 protein_coding protein_coding MGP_LPJ_T0002674.1 MGP_LPJ_G0002561.1 mouse_genomes_project 14 48534703 48535322 + MGP_LPJ_P0002674 TR_V_gene TR_V_gene MGP_LPJ_T0039578.1 MGP_LPJ_G0021319.1 mouse_genomes_project 14 53080177 53082684 + MGP_LPJ_P0039578 Mrpl57 protein_coding protein_coding MGP_LPJ_T0040004.1 MGP_LPJ_G0021480.1 mouse_genomes_project 14 71994364 72004049 + MGP_LPJ_P0040004 Kctd4 protein_coding protein_coding MGP_LPJ_T0003555.1 MGP_LPJ_G0003231.1 mouse_genomes_project 14 26983698 26987868 - Gm15512 antisense antisense MGP_LPJ_T0038745.1 MGP_LPJ_G0021046.1 mouse_genomes_project 14 26554325 26800303 - MGP_LPJ_P0038745 Wdfy4 protein_coding protein_coding MGP_LPJ_T0038746.1 MGP_LPJ_G0021046.1 mouse_genomes_project 14 26554348 26800303 - MGP_LPJ_P0038746 Wdfy4 protein_coding protein_coding MGP_LPJ_T0038753.1 MGP_LPJ_G0021046.1 mouse_genomes_project 14 26614084 26774068 - MGP_LPJ_P0038753 Wdfy4 protein_coding unknown_likely_coding MGP_LPJ_T0038754.1 MGP_LPJ_G0021046.1 mouse_genomes_project 14 26618327 26623377 - MGP_LPJ_P0038754 Wdfy4 protein_coding protein_coding MGP_LPJ_T0038755.1 MGP_LPJ_G0021046.1 mouse_genomes_project 14 26773873 26800745 - MGP_LPJ_P0038755 Wdfy4 protein_coding protein_coding MGP_LPJ_T0039512.1 MGP_LPJ_G0021290.1 mouse_genomes_project 14 51235544 51238551 - MGP_LPJ_P0039512 Gzme protein_coding protein_coding MGP_LPJ_T0002670.1 MGP_LPJ_G0002557.1 mouse_genomes_project 14 48448363 48460483 + MGP_LPJ_P0002670 TR_V_gene TR_V_gene MGP_LPJ_T0039772.1 MGP_LPJ_G0021400.1 mouse_genomes_project 14 61854990 61927148 - MGP_LPJ_P0039772 Ptk2b protein_coding unknown_likely_coding MGP_LPJ_T0039773.1 MGP_LPJ_G0021400.1 mouse_genomes_project 14 61854992 61874448 - MGP_LPJ_P0039773 Ptk2b protein_coding protein_coding MGP_LPJ_T0039774.1 MGP_LPJ_G0021400.1 mouse_genomes_project 14 61854992 61997117 - MGP_LPJ_P0039774 Ptk2b protein_coding protein_coding MGP_LPJ_T0039775.1 MGP_LPJ_G0021400.1 mouse_genomes_project 14 61854997 61863874 - Ptk2b protein_coding retained_intron MGP_LPJ_T0039776.1 MGP_LPJ_G0021400.1 mouse_genomes_project 14 61855574 61997047 - MGP_LPJ_P0039776 Ptk2b protein_coding protein_coding MGP_LPJ_T0039777.1 MGP_LPJ_G0021400.1 mouse_genomes_project 14 61858011 61867098 - Ptk2b protein_coding retained_intron MGP_LPJ_T0039778.1 MGP_LPJ_G0021400.1 mouse_genomes_project 14 61876891 61997057 - Ptk2b protein_coding retained_intron MGP_LPJ_T0039675.1 MGP_LPJ_G0021358.1 mouse_genomes_project 14 58483901 58491287 - MGP_LPJ_P0039675 Defb48 protein_coding protein_coding MGP_LPJ_T0039814.1 MGP_LPJ_G0021411.1 mouse_genomes_project 14 63475020 63514519 - MGP_LPJ_P0039814 Cdca2 protein_coding protein_coding MGP_LPJ_T0039815.1 MGP_LPJ_G0021411.1 mouse_genomes_project 14 63475044 63514288 - MGP_LPJ_P0039815 Cdca2 protein_coding protein_coding MGP_LPJ_T0039816.1 MGP_LPJ_G0021411.1 mouse_genomes_project 14 63476485 63495420 - MGP_LPJ_P0039816 Cdca2 protein_coding protein_coding MGP_LPJ_T0039817.1 MGP_LPJ_G0021411.1 mouse_genomes_project 14 63478992 63514288 - MGP_LPJ_P0039817 Cdca2 protein_coding protein_coding MGP_LPJ_T0039818.1 MGP_LPJ_G0021411.1 mouse_genomes_project 14 63492802 63496667 - MGP_LPJ_P0039818 Cdca2 protein_coding nonsense_mediated_decay MGP_LPJ_T0039819.1 MGP_LPJ_G0021411.1 mouse_genomes_project 14 63497621 63514053 - Cdca2 protein_coding retained_intron MGP_LPJ_T0039820.1 MGP_LPJ_G0021411.1 mouse_genomes_project 14 63498957 63514359 - MGP_LPJ_P0039820 Cdca2 protein_coding protein_coding MGP_LPJ_T0002651.1 MGP_LPJ_G0002540.1 mouse_genomes_project 14 47863679 47864176 + MGP_LPJ_P0002651 TR_V_gene TR_V_gene MGP_LPJ_T0039373.1 MGP_LPJ_G0021249.1 mouse_genomes_project 14 50559718 50576855 + MGP_LPJ_P0039373 Lrrc16b protein_coding protein_coding MGP_LPJ_T0100340.1 MGP_LPJ_G0038603.1 mouse_genomes_project 14 83854921 83855064 + Gm23278 snoRNA snoRNA MGP_LPJ_T0038559.1 MGP_LPJ_G0021003.1 mouse_genomes_project 14 24362582 24382280 + MGP_LPJ_P0038559 Itih4 protein_coding protein_coding MGP_LPJ_T0038560.1 MGP_LPJ_G0021003.1 mouse_genomes_project 14 24362608 24382143 + MGP_LPJ_P0038560 Itih4 protein_coding protein_coding MGP_LPJ_T0038561.1 MGP_LPJ_G0021003.1 mouse_genomes_project 14 24362608 24382247 + MGP_LPJ_P0038561 Itih4 protein_coding protein_coding MGP_LPJ_T0038562.1 MGP_LPJ_G0021003.1 mouse_genomes_project 14 24362627 24382145 + MGP_LPJ_P0038562 Itih4 protein_coding protein_coding MGP_LPJ_T0038563.1 MGP_LPJ_G0021003.1 mouse_genomes_project 14 24379522 24382148 + Itih4 protein_coding retained_intron MGP_LPJ_T0002751.1 MGP_LPJ_G0002623.1 mouse_genomes_project 14 48880822 48881441 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0039385.1 MGP_LPJ_G0021253.1 mouse_genomes_project 14 50639488 50639953 - MGP_LPJ_P0039385 A730061H03Rik protein_coding protein_coding MGP_LPJ_T0012997.1 MGP_LPJ_G0011088.1 mouse_genomes_project 14 47479765 47480495 + processed_pseudogene processed_pseudogene MGP_LPJ_T0038666.1 MGP_LPJ_G0021025.1 mouse_genomes_project 14 25068234 25159277 - MGP_LPJ_P0038666 Hacl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038670.1 MGP_LPJ_G0021025.1 mouse_genomes_project 14 25117252 25159343 - MGP_LPJ_P0038670 Hacl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038671.1 MGP_LPJ_G0021025.1 mouse_genomes_project 14 25125787 25159363 - MGP_LPJ_P0038671 Hacl1 protein_coding protein_coding MGP_LPJ_T0038672.1 MGP_LPJ_G0021025.1 mouse_genomes_project 14 25126221 25132758 - Hacl1 protein_coding processed_transcript MGP_LPJ_T0038673.1 MGP_LPJ_G0021025.1 mouse_genomes_project 14 25126525 25128779 - Hacl1 protein_coding processed_transcript MGP_LPJ_T0038674.1 MGP_LPJ_G0021025.1 mouse_genomes_project 14 25126567 25159311 - MGP_LPJ_P0038674 Hacl1 protein_coding protein_coding MGP_LPJ_T0038675.1 MGP_LPJ_G0021025.1 mouse_genomes_project 14 25126567 25159277 - MGP_LPJ_P0038675 Hacl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038676.1 MGP_LPJ_G0021025.1 mouse_genomes_project 14 25126567 25159277 - MGP_LPJ_P0038676 Hacl1 protein_coding protein_coding MGP_LPJ_T0038677.1 MGP_LPJ_G0021025.1 mouse_genomes_project 14 25126567 25159277 - MGP_LPJ_P0038677 Hacl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038678.1 MGP_LPJ_G0021025.1 mouse_genomes_project 14 25144860 25159571 - MGP_LPJ_P0038678 Hacl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038679.1 MGP_LPJ_G0021025.1 mouse_genomes_project 14 25148189 25159656 - MGP_LPJ_P0038679 Hacl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038680.1 MGP_LPJ_G0021025.1 mouse_genomes_project 14 25149001 25159345 - Hacl1 protein_coding retained_intron MGP_LPJ_T0038681.1 MGP_LPJ_G0021025.1 mouse_genomes_project 14 25153931 25159310 - Hacl1 protein_coding retained_intron MGP_LPJ_T0038682.1 MGP_LPJ_G0021025.1 mouse_genomes_project 14 25154070 25159685 - Hacl1 protein_coding retained_intron MGP_LPJ_T0003565.1 MGP_LPJ_G0003241.1 mouse_genomes_project 14 49026171 49084561 - Gm42877 antisense antisense MGP_LPJ_T0003566.1 MGP_LPJ_G0003241.1 mouse_genomes_project 14 49063997 49084621 - Gm42877 antisense antisense MGP_LPJ_T0039639.1 MGP_LPJ_G0021341.1 mouse_genomes_project 14 56184725 56304952 + MGP_LPJ_P0039639 Mipep protein_coding protein_coding MGP_LPJ_T0039821.1 MGP_LPJ_G0021412.1 mouse_genomes_project 14 63514614 63538335 + MGP_LPJ_P0039821 Kctd9 protein_coding protein_coding MGP_LPJ_T0039822.1 MGP_LPJ_G0021412.1 mouse_genomes_project 14 63514775 63540989 + MGP_LPJ_P0039822 Kctd9 protein_coding protein_coding MGP_LPJ_T0039823.1 MGP_LPJ_G0021412.1 mouse_genomes_project 14 63514817 63528373 + MGP_LPJ_P0039823 Kctd9 protein_coding protein_coding MGP_LPJ_T0039824.1 MGP_LPJ_G0021412.1 mouse_genomes_project 14 63514962 63540840 + MGP_LPJ_P0039824 Kctd9 protein_coding nonsense_mediated_decay MGP_LPJ_T0039825.1 MGP_LPJ_G0021412.1 mouse_genomes_project 14 63515014 63540841 + MGP_LPJ_P0039825 Kctd9 protein_coding protein_coding MGP_LPJ_T0013012.1 MGP_LPJ_G0011103.1 mouse_genomes_project 14 55519335 55519683 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100309.1 MGP_LPJ_G0038572.1 mouse_genomes_project 14 19740962 19741093 + Gm24031 snoRNA snoRNA MGP_LPJ_T0039436.1 MGP_LPJ_G0021260.1 mouse_genomes_project 14 50684050 50690488 + MGP_LPJ_P0039436 Irf9 protein_coding protein_coding MGP_LPJ_T0039437.1 MGP_LPJ_G0021260.1 mouse_genomes_project 14 50684464 50690488 + MGP_LPJ_P0039437 Irf9 protein_coding protein_coding MGP_LPJ_T0039438.1 MGP_LPJ_G0021260.1 mouse_genomes_project 14 50685056 50686318 + Irf9 protein_coding retained_intron MGP_LPJ_T0039439.1 MGP_LPJ_G0021260.1 mouse_genomes_project 14 50685058 50690488 + MGP_LPJ_P0039439 Irf9 protein_coding protein_coding MGP_LPJ_T0039440.1 MGP_LPJ_G0021260.1 mouse_genomes_project 14 50686277 50690485 + Irf9 protein_coding retained_intron MGP_LPJ_T0039441.1 MGP_LPJ_G0021260.1 mouse_genomes_project 14 50687732 50689191 + Irf9 protein_coding retained_intron MGP_LPJ_T0002643.1 MGP_LPJ_G0002532.1 mouse_genomes_project 14 47652245 47652756 + MGP_LPJ_P0002643 TR_V_gene TR_V_gene MGP_LPJ_T0039743.1 MGP_LPJ_G0021388.1 mouse_genomes_project 14 61177839 61241561 - MGP_LPJ_P0039743 Elp3 protein_coding protein_coding MGP_LPJ_T0002605.1 MGP_LPJ_G0002502.1 mouse_genomes_project 14 49119653 49119696 + TR_J_pseudogene TR_J_pseudogene MGP_LPJ_T0006719.1 MGP_LPJ_G0005555.1 mouse_genomes_project 14 51862092 51865174 - Gm16973 lincRNA lincRNA MGP_LPJ_T0006720.1 MGP_LPJ_G0005555.1 mouse_genomes_project 14 51863159 51867081 - Gm16973 lincRNA lincRNA MGP_LPJ_T0038907.1 MGP_LPJ_G0021108.1 mouse_genomes_project 14 40788542 40802486 - MGP_LPJ_P0038907 Gmfb protein_coding protein_coding MGP_LPJ_T0038908.1 MGP_LPJ_G0021108.1 mouse_genomes_project 14 40788542 40802486 - MGP_LPJ_P0038908 Gmfb protein_coding protein_coding MGP_LPJ_T0038909.1 MGP_LPJ_G0021108.1 mouse_genomes_project 14 40794655 40799962 - MGP_LPJ_P0038909 Gmfb protein_coding protein_coding MGP_LPJ_T0002559.1 MGP_LPJ_G0002458.1 mouse_genomes_project 14 49144275 49144335 + MGP_LPJ_P0002559 Traj29 TR_J_gene TR_J_gene MGP_LPJ_T0040218.1 MGP_LPJ_G0021560.1 mouse_genomes_project 14 118975176 119137062 + MGP_LPJ_P0040218 Mbnl2 protein_coding protein_coding MGP_LPJ_T0040219.1 MGP_LPJ_G0021560.1 mouse_genomes_project 14 118975176 119137062 + MGP_LPJ_P0040219 Mbnl2 protein_coding protein_coding MGP_LPJ_T0040220.1 MGP_LPJ_G0021560.1 mouse_genomes_project 14 119025929 119134247 + MGP_LPJ_P0040220 Mbnl2 protein_coding unknown_likely_coding MGP_LPJ_T0002646.1 MGP_LPJ_G0002535.1 mouse_genomes_project 14 47814371 47814638 + MGP_LPJ_P0002646 TR_V_gene TR_V_gene MGP_LPJ_T0003561.1 MGP_LPJ_G0003237.1 mouse_genomes_project 14 39500963 39512043 + Gm15601 antisense antisense MGP_LPJ_T0038604.1 MGP_LPJ_G0021012.1 mouse_genomes_project 14 24629007 24638668 + MGP_LPJ_P0038604 Nt5dc2 protein_coding protein_coding MGP_LPJ_T0039021.1 MGP_LPJ_G0021140.1 mouse_genomes_project 14 44542325 44543276 - Olfr735 protein_coding transcribed_unprocessed_pseudogene MGP_LPJ_T0039022.1 MGP_LPJ_G0021140.1 mouse_genomes_project 14 44542325 44543390 - MGP_LPJ_P0039022 Olfr735 protein_coding protein_coding MGP_LPJ_T0039023.1 MGP_LPJ_G0021140.1 mouse_genomes_project 14 44542728 44546900 - Olfr735 protein_coding processed_transcript MGP_LPJ_T0040119.1 MGP_LPJ_G0021527.1 mouse_genomes_project 14 98969195 99183435 + MGP_LPJ_P0040119 Lmo7 protein_coding protein_coding MGP_LPJ_T0040120.1 MGP_LPJ_G0021527.1 mouse_genomes_project 14 99069451 99120237 + Lmo7 protein_coding processed_transcript MGP_LPJ_T0040121.1 MGP_LPJ_G0021527.1 mouse_genomes_project 14 99078894 99185655 + MGP_LPJ_P0040121 Lmo7 protein_coding nonsense_mediated_decay MGP_LPJ_T0040122.1 MGP_LPJ_G0021527.1 mouse_genomes_project 14 99080723 99123817 + Lmo7 protein_coding processed_transcript MGP_LPJ_T0040123.1 MGP_LPJ_G0021527.1 mouse_genomes_project 14 99080933 99125235 + Lmo7 protein_coding retained_intron MGP_LPJ_T0040124.1 MGP_LPJ_G0021527.1 mouse_genomes_project 14 99080933 99138007 + MGP_LPJ_P0040124 Lmo7 protein_coding protein_coding MGP_LPJ_T0040125.1 MGP_LPJ_G0021527.1 mouse_genomes_project 14 99081254 99153285 + Lmo7 protein_coding retained_intron MGP_LPJ_T0040126.1 MGP_LPJ_G0021527.1 mouse_genomes_project 14 99108787 99123620 + Lmo7 protein_coding processed_transcript MGP_LPJ_T0040127.1 MGP_LPJ_G0021527.1 mouse_genomes_project 14 99116174 99185492 + MGP_LPJ_P0040127 Lmo7 protein_coding protein_coding MGP_LPJ_T0040128.1 MGP_LPJ_G0021527.1 mouse_genomes_project 14 99120246 99183701 + MGP_LPJ_P0040128 Lmo7 protein_coding protein_coding MGP_LPJ_T0040129.1 MGP_LPJ_G0021527.1 mouse_genomes_project 14 99123489 99139469 + Lmo7 protein_coding retained_intron MGP_LPJ_T0040130.1 MGP_LPJ_G0021527.1 mouse_genomes_project 14 99123521 99127605 + Lmo7 protein_coding retained_intron MGP_LPJ_T0040131.1 MGP_LPJ_G0021527.1 mouse_genomes_project 14 99159670 99179804 + Lmo7 protein_coding retained_intron MGP_LPJ_T0040132.1 MGP_LPJ_G0021527.1 mouse_genomes_project 14 99175343 99182652 + Lmo7 protein_coding processed_transcript MGP_LPJ_T0040133.1 MGP_LPJ_G0021527.1 mouse_genomes_project 14 99178304 99182382 + Lmo7 protein_coding processed_transcript MGP_LPJ_T0039442.1 MGP_LPJ_G0021261.1 mouse_genomes_project 14 50703778 50713154 + MGP_LPJ_P0039442 Rec8 protein_coding protein_coding MGP_LPJ_T0039443.1 MGP_LPJ_G0021261.1 mouse_genomes_project 14 50703924 50704558 + Rec8 protein_coding retained_intron MGP_LPJ_T0039444.1 MGP_LPJ_G0021261.1 mouse_genomes_project 14 50711327 50712269 + Rec8 protein_coding retained_intron MGP_LPJ_T0039445.1 MGP_LPJ_G0021261.1 mouse_genomes_project 14 50712677 50713154 + Rec8 protein_coding retained_intron MGP_LPJ_T0039510.1 MGP_LPJ_G0021288.1 mouse_genomes_project 14 51200333 51203379 - MGP_LPJ_P0039510 Mcpt8 protein_coding protein_coding MGP_LPJ_T0040033.1 MGP_LPJ_G0021489.1 mouse_genomes_project 14 73965291 74020278 - MGP_LPJ_P0040033 Dnajc15 protein_coding protein_coding MGP_LPJ_T0100307.1 MGP_LPJ_G0038570.1 mouse_genomes_project 14 11513309 11513444 + Gm22499 snoRNA snoRNA MGP_LPJ_T0099080.1 MGP_LPJ_G0037343.1 mouse_genomes_project 14 94977554 94977717 - Gm25831 snRNA snRNA MGP_LPJ_T0100358.1 MGP_LPJ_G0038621.1 mouse_genomes_project 14 104230619 104230746 + Gm23437 snoRNA snoRNA MGP_LPJ_T0038780.1 MGP_LPJ_G0021057.1 mouse_genomes_project 14 27719111 27771750 - MGP_LPJ_P0038780 A630023A22Rik protein_coding protein_coding MGP_LPJ_T0039756.1 MGP_LPJ_G0021393.1 mouse_genomes_project 14 61515301 61546691 + MGP_LPJ_P0039756 Ccdc25 protein_coding protein_coding MGP_LPJ_T0012958.1 MGP_LPJ_G0011049.1 mouse_genomes_project 14 2183100 2183701 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017357.1 MGP_LPJ_G0015194.1 mouse_genomes_project 14 74217647 74248272 + Gm19301 processed_transcript processed_transcript MGP_LPJ_T0039959.1 MGP_LPJ_G0021462.1 mouse_genomes_project 14 69439797 69477725 - MGP_LPJ_P0039959 protein_coding protein_coding MGP_LPJ_T0100315.1 MGP_LPJ_G0038578.1 mouse_genomes_project 14 26822401 26822530 + Gm25498 snoRNA snoRNA MGP_LPJ_T0039024.1 MGP_LPJ_G0021141.1 mouse_genomes_project 14 44553843 44559591 + MGP_LPJ_P0039024 Tlr11 protein_coding protein_coding MGP_LPJ_T0039025.1 MGP_LPJ_G0021141.1 mouse_genomes_project 14 44556429 44559422 + MGP_LPJ_P0039025 Tlr11 protein_coding protein_coding MGP_LPJ_T0013014.1 MGP_LPJ_G0011105.1 mouse_genomes_project 14 57025597 57028281 + processed_pseudogene processed_pseudogene MGP_LPJ_T0040101.1 MGP_LPJ_G0021522.1 mouse_genomes_project 14 98385287 98387667 - MGP_LPJ_P0040101 Prr30 protein_coding protein_coding MGP_LPJ_T0040102.1 MGP_LPJ_G0021522.1 mouse_genomes_project 14 98385295 98387928 - MGP_LPJ_P0040102 Prr30 protein_coding protein_coding MGP_LPJ_T0038904.1 MGP_LPJ_G0021106.1 mouse_genomes_project 14 40742350 40753335 + MGP_LPJ_P0038904 Cdkn3 protein_coding protein_coding MGP_LPJ_T0038905.1 MGP_LPJ_G0021106.1 mouse_genomes_project 14 40742449 40753297 + MGP_LPJ_P0038905 Cdkn3 protein_coding unknown_likely_coding MGP_LPJ_T0039849.1 MGP_LPJ_G0021428.1 mouse_genomes_project 14 65613105 65628087 + MGP_LPJ_P0039849 unknown_likely_coding unknown_likely_coding MGP_LPJ_T0100326.1 MGP_LPJ_G0038589.1 mouse_genomes_project 14 52558413 52558533 - Gm23593 snoRNA snoRNA MGP_LPJ_T0101876.1 MGP_LPJ_G0039913.1 mouse_genomes_project 14 45359732 45360165 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0040154.1 MGP_LPJ_G0021534.1 mouse_genomes_project 14 100976827 101032896 + MGP_LPJ_P0040154 Slain1 protein_coding protein_coding MGP_LPJ_T0040155.1 MGP_LPJ_G0021534.1 mouse_genomes_project 14 100977245 101032299 + MGP_LPJ_P0040155 Slain1 protein_coding protein_coding MGP_LPJ_T0040156.1 MGP_LPJ_G0021534.1 mouse_genomes_project 14 100982353 101018422 + MGP_LPJ_P0040156 Slain1 protein_coding protein_coding MGP_LPJ_T0040157.1 MGP_LPJ_G0021534.1 mouse_genomes_project 14 100991171 101032791 + MGP_LPJ_P0040157 Slain1 protein_coding protein_coding MGP_LPJ_T0098170.1 MGP_LPJ_G0036451.1 mouse_genomes_project 14 100109071 100109119 + Gm23764 rRNA rRNA MGP_LPJ_T0013003.1 MGP_LPJ_G0011094.1 mouse_genomes_project 14 51391707 51392716 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006676.1 MGP_LPJ_G0005526.1 mouse_genomes_project 14 17836161 17846780 - lincRNA lincRNA MGP_LPJ_T0006677.1 MGP_LPJ_G0005526.1 mouse_genomes_project 14 17844586 17846773 - lincRNA lincRNA MGP_LPJ_T0010039.1 MGP_LPJ_G0008157.1 mouse_genomes_project 14 117221366 117221470 - Mir6391 miRNA miRNA MGP_LPJ_T0010035.1 MGP_LPJ_G0008153.1 mouse_genomes_project 14 113526036 113526123 + Mir19b-1 miRNA miRNA MGP_LPJ_T0013007.1 MGP_LPJ_G0011098.1 mouse_genomes_project 14 51962288 51975288 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013018.1 MGP_LPJ_G0011109.1 mouse_genomes_project 14 69853564 69854113 - processed_pseudogene processed_pseudogene MGP_LPJ_T0038499.1 MGP_LPJ_G0020985.1 mouse_genomes_project 14 20750809 20812842 + MGP_LPJ_P0038499 Fam208a protein_coding protein_coding MGP_LPJ_T0002680.1 MGP_LPJ_G0002566.1 mouse_genomes_project 14 48567196 48567722 + MGP_LPJ_P0002680 TR_V_gene TR_V_gene MGP_LPJ_T0006725.1 MGP_LPJ_G0005560.1 mouse_genomes_project 14 57074935 57095855 + Gm27017 lincRNA lincRNA MGP_LPJ_T0039336.1 MGP_LPJ_G0021237.1 mouse_genomes_project 14 49934998 49938140 + MGP_LPJ_P0039336 Il25 protein_coding protein_coding MGP_LPJ_T0006672.1 MGP_LPJ_G0005523.1 mouse_genomes_project 14 8077841 8092631 + B230110C06Rik lincRNA lincRNA MGP_LPJ_T0006673.1 MGP_LPJ_G0005523.1 mouse_genomes_project 14 8078410 8092093 + B230110C06Rik lincRNA lincRNA MGP_LPJ_T0101874.1 MGP_LPJ_G0039911.1 mouse_genomes_project 14 44607347 44607630 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0011393.1 MGP_LPJ_G0009511.1 mouse_genomes_project 14 57074623 57074760 + Gm27972 misc_RNA misc_RNA MGP_LPJ_T0100343.1 MGP_LPJ_G0038606.1 mouse_genomes_project 14 87805738 87805852 - Gm23225 snoRNA snoRNA MGP_LPJ_T0013011.1 MGP_LPJ_G0011102.1 mouse_genomes_project 14 54745245 54745540 - processed_pseudogene processed_pseudogene MGP_LPJ_T0039977.1 MGP_LPJ_G0021468.1 mouse_genomes_project 14 70975860 71015523 + MGP_LPJ_P0039977 5031414D18Rik protein_coding protein_coding MGP_LPJ_T0039737.1 MGP_LPJ_G0021384.1 mouse_genomes_project 14 60834748 60898259 - MGP_LPJ_P0039737 Fzd3 protein_coding protein_coding MGP_LPJ_T0039738.1 MGP_LPJ_G0021384.1 mouse_genomes_project 14 60843441 60862909 - Fzd3 protein_coding processed_transcript MGP_LPJ_T0006701.1 MGP_LPJ_G0005543.1 mouse_genomes_project 14 40528318 40540456 + E130120K24Rik lincRNA lincRNA MGP_LPJ_T0038898.1 MGP_LPJ_G0021104.1 mouse_genomes_project 14 40330397 40334402 + Gm15217 protein_coding processed_transcript MGP_LPJ_T0038899.1 MGP_LPJ_G0021104.1 mouse_genomes_project 14 40330450 40334592 + MGP_LPJ_P0038899 Gm15217 protein_coding protein_coding MGP_LPJ_T0038900.1 MGP_LPJ_G0021104.1 mouse_genomes_project 14 40332110 40334352 + Gm15217 protein_coding processed_transcript MGP_LPJ_T0006711.1 MGP_LPJ_G0005549.1 mouse_genomes_project 14 45792049 45796016 + Gm21718 lincRNA lincRNA MGP_LPJ_T0006712.1 MGP_LPJ_G0005549.1 mouse_genomes_project 14 45792064 45797025 + Gm21718 lincRNA lincRNA MGP_LPJ_T0039493.1 MGP_LPJ_G0021275.1 mouse_genomes_project 14 50860507 50862979 + MGP_LPJ_P0039493 Ltb4r1 protein_coding protein_coding MGP_LPJ_T0038779.1 MGP_LPJ_G0021056.1 mouse_genomes_project 14 27709085 27714949 + MGP_LPJ_P0038779 Gm5460 protein_coding protein_coding MGP_LPJ_T0039659.1 MGP_LPJ_G0021351.1 mouse_genomes_project 14 57750795 57768703 - MGP_LPJ_P0039659 Dleu7 protein_coding protein_coding MGP_LPJ_T0038219.1 MGP_LPJ_G0020907.1 mouse_genomes_project 14 6720231 6721254 - MGP_LPJ_P0038219 Olfr720 protein_coding protein_coding MGP_LPJ_T0038220.1 MGP_LPJ_G0020907.1 mouse_genomes_project 14 6720833 6732156 - MGP_LPJ_P0038220 Olfr720 protein_coding protein_coding MGP_LPJ_T0039860.1 MGP_LPJ_G0021435.1 mouse_genomes_project 14 66038390 66055897 - MGP_LPJ_P0039860 Pdlim2 protein_coding protein_coding MGP_LPJ_T0039861.1 MGP_LPJ_G0021435.1 mouse_genomes_project 14 66038403 66055035 - MGP_LPJ_P0039861 Pdlim2 protein_coding protein_coding MGP_LPJ_T0039862.1 MGP_LPJ_G0021435.1 mouse_genomes_project 14 66038534 66042018 - MGP_LPJ_P0039862 Pdlim2 protein_coding protein_coding MGP_LPJ_T0039863.1 MGP_LPJ_G0021435.1 mouse_genomes_project 14 66038719 66042573 - MGP_LPJ_P0039863 Pdlim2 protein_coding protein_coding MGP_LPJ_T0039864.1 MGP_LPJ_G0021435.1 mouse_genomes_project 14 66038770 66042152 - MGP_LPJ_P0039864 Pdlim2 protein_coding protein_coding MGP_LPJ_T0039865.1 MGP_LPJ_G0021435.1 mouse_genomes_project 14 66041942 66053649 - MGP_LPJ_P0039865 Pdlim2 protein_coding protein_coding MGP_LPJ_T0039866.1 MGP_LPJ_G0021435.1 mouse_genomes_project 14 66041968 66055035 - Pdlim2 protein_coding retained_intron MGP_LPJ_T0039867.1 MGP_LPJ_G0021435.1 mouse_genomes_project 14 66043576 66053642 - Pdlim2 protein_coding retained_intron MGP_LPJ_T0039868.1 MGP_LPJ_G0021435.1 mouse_genomes_project 14 66045607 66053636 - Pdlim2 protein_coding retained_intron MGP_LPJ_T0039869.1 MGP_LPJ_G0021435.1 mouse_genomes_project 14 66045685 66046161 - Pdlim2 protein_coding retained_intron MGP_LPJ_T0038928.1 MGP_LPJ_G0021113.1 mouse_genomes_project 14 41292923 41315514 + MGP_LPJ_P0038928 Socs4 protein_coding protein_coding MGP_LPJ_T0010008.1 MGP_LPJ_G0008126.1 mouse_genomes_project 14 55606708 55606818 - Mir719 miRNA miRNA MGP_LPJ_T0038242.1 MGP_LPJ_G0020916.1 mouse_genomes_project 14 9052529 9120824 + MGP_LPJ_P0038242 Top2b protein_coding protein_coding MGP_LPJ_T0038243.1 MGP_LPJ_G0020916.1 mouse_genomes_project 14 9078765 9082743 + Top2b protein_coding retained_intron MGP_LPJ_T0038244.1 MGP_LPJ_G0020916.1 mouse_genomes_project 14 9099088 9106149 + MGP_LPJ_P0038244 Top2b protein_coding protein_coding MGP_LPJ_T0038245.1 MGP_LPJ_G0020916.1 mouse_genomes_project 14 9101177 9105820 + MGP_LPJ_P0038245 Top2b protein_coding nonsense_mediated_decay MGP_LPJ_T0038246.1 MGP_LPJ_G0020916.1 mouse_genomes_project 14 9102814 9115480 + MGP_LPJ_P0038246 Top2b protein_coding protein_coding MGP_LPJ_T0038247.1 MGP_LPJ_G0020916.1 mouse_genomes_project 14 9113328 9118543 + Top2b protein_coding retained_intron MGP_LPJ_T0038503.1 MGP_LPJ_G0020988.1 mouse_genomes_project 14 21856725 21859948 + Wnt5a protein_coding processed_transcript MGP_LPJ_T0038504.1 MGP_LPJ_G0020988.1 mouse_genomes_project 14 21856934 21874812 + MGP_LPJ_P0038504 Wnt5a protein_coding protein_coding MGP_LPJ_T0038505.1 MGP_LPJ_G0020988.1 mouse_genomes_project 14 21861446 21862754 + Wnt5a protein_coding processed_transcript MGP_LPJ_T0038506.1 MGP_LPJ_G0020988.1 mouse_genomes_project 14 21862218 21875389 + Wnt5a protein_coding processed_transcript MGP_LPJ_T0038507.1 MGP_LPJ_G0020988.1 mouse_genomes_project 14 21862279 21862736 + Wnt5a protein_coding processed_transcript MGP_LPJ_T0002640.1 MGP_LPJ_G0002529.1 mouse_genomes_project 14 47500050 47500520 + MGP_LPJ_P0002640 TR_V_gene TR_V_gene MGP_LPJ_T0038517.1 MGP_LPJ_G0020994.1 mouse_genomes_project 14 23433264 23464708 + MGP_LPJ_P0038517 Chdh protein_coding protein_coding MGP_LPJ_T0038518.1 MGP_LPJ_G0020994.1 mouse_genomes_project 14 23433412 23451429 + Chdh protein_coding processed_transcript MGP_LPJ_T0038519.1 MGP_LPJ_G0020994.1 mouse_genomes_project 14 23446874 23462489 + MGP_LPJ_P0038519 Chdh protein_coding protein_coding MGP_LPJ_T0003589.1 MGP_LPJ_G0003259.1 mouse_genomes_project 14 65000627 65007079 - 1700092C10Rik antisense antisense MGP_LPJ_T0006702.1 MGP_LPJ_G0005544.1 mouse_genomes_project 14 40542303 40548438 - Rubie lincRNA lincRNA MGP_LPJ_T0039225.1 MGP_LPJ_G0021206.1 mouse_genomes_project 14 47117440 47122170 - MGP_LPJ_P0039225 Olfr1508 protein_coding protein_coding MGP_LPJ_T0039226.1 MGP_LPJ_G0021206.1 mouse_genomes_project 14 47117794 47122204 - MGP_LPJ_P0039226 Olfr1508 protein_coding protein_coding MGP_LPJ_T0039227.1 MGP_LPJ_G0021206.1 mouse_genomes_project 14 47118262 47121799 - MGP_LPJ_P0039227 Olfr1508 protein_coding protein_coding MGP_LPJ_T0039335.1 MGP_LPJ_G0021236.1 mouse_genomes_project 14 49918660 49929080 - MGP_LPJ_P0039335 Efs protein_coding protein_coding MGP_LPJ_T0039994.1 MGP_LPJ_G0021474.1 mouse_genomes_project 14 71593095 71601209 - MGP_LPJ_P0039994 Spert protein_coding protein_coding MGP_LPJ_T0039995.1 MGP_LPJ_G0021474.1 mouse_genomes_project 14 71593095 71602340 - MGP_LPJ_P0039995 Spert protein_coding protein_coding MGP_LPJ_T0039996.1 MGP_LPJ_G0021474.1 mouse_genomes_project 14 71593095 71602340 - MGP_LPJ_P0039996 Spert protein_coding protein_coding MGP_LPJ_T0039997.1 MGP_LPJ_G0021474.1 mouse_genomes_project 14 71593095 71601209 - MGP_LPJ_P0039997 Spert protein_coding protein_coding MGP_LPJ_T0039094.1 MGP_LPJ_G0021183.1 mouse_genomes_project 14 46320177 46329801 - MGP_LPJ_P0039094 Ang4 protein_coding protein_coding MGP_LPJ_T0039146.1 MGP_LPJ_G0021191.1 mouse_genomes_project 14 46619864 46635550 - MGP_LPJ_P0039146 Zfp219 protein_coding protein_coding MGP_LPJ_T0039147.1 MGP_LPJ_G0021191.1 mouse_genomes_project 14 46619873 46634572 - MGP_LPJ_P0039147 Zfp219 protein_coding protein_coding MGP_LPJ_T0039654.1 MGP_LPJ_G0021348.1 mouse_genomes_project 14 56953860 56978206 - MGP_LPJ_P0039654 Spryd7 protein_coding protein_coding MGP_LPJ_T0039655.1 MGP_LPJ_G0021348.1 mouse_genomes_project 14 56956162 56978078 - MGP_LPJ_P0039655 Spryd7 protein_coding protein_coding MGP_LPJ_T0002639.1 MGP_LPJ_G0002528.1 mouse_genomes_project 14 47500013 47500520 + MGP_LPJ_P0002639 TR_V_gene TR_V_gene MGP_LPJ_T0040055.1 MGP_LPJ_G0021500.1 mouse_genomes_project 14 75647976 75652578 + MGP_LPJ_P0040055 protein_coding protein_coding MGP_LPJ_T0101869.1 MGP_LPJ_G0039906.1 mouse_genomes_project 14 11894602 11897797 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0039026.1 MGP_LPJ_G0021142.1 mouse_genomes_project 14 44588955 44589894 + MGP_LPJ_P0039026 Olfr736 protein_coding protein_coding MGP_LPJ_T0039173.1 MGP_LPJ_G0021196.1 mouse_genomes_project 14 46787964 46824917 - MGP_LPJ_P0039173 Supt16 protein_coding protein_coding MGP_LPJ_T0039722.1 MGP_LPJ_G0021380.1 mouse_genomes_project 14 60257951 60421916 + MGP_LPJ_P0039722 Kif13b protein_coding protein_coding MGP_LPJ_T0039723.1 MGP_LPJ_G0021380.1 mouse_genomes_project 14 60258022 60421916 + MGP_LPJ_P0039723 Kif13b protein_coding unknown_likely_coding MGP_LPJ_T0040114.1 MGP_LPJ_G0021524.1 mouse_genomes_project 14 98846740 98854612 - MGP_LPJ_P0040114 Commd6 protein_coding protein_coding MGP_LPJ_T0040115.1 MGP_LPJ_G0021524.1 mouse_genomes_project 14 98846741 98853475 - MGP_LPJ_P0040115 Commd6 protein_coding protein_coding MGP_LPJ_T0040116.1 MGP_LPJ_G0021524.1 mouse_genomes_project 14 98853049 98854612 - Commd6 protein_coding retained_intron MGP_LPJ_T0039504.1 MGP_LPJ_G0021282.1 mouse_genomes_project 14 50995618 50998565 - MGP_LPJ_P0039504 Sdr39u1 protein_coding protein_coding MGP_LPJ_T0000961.1 MGP_LPJ_G0000889.1 mouse_genomes_project 14 115309920 115310835 + TEC TEC MGP_LPJ_T0010029.1 MGP_LPJ_G0008147.1 mouse_genomes_project 14 103031772 103031901 - Mir6390 miRNA miRNA MGP_LPJ_T0038743.1 MGP_LPJ_G0021044.1 mouse_genomes_project 14 26423212 26426040 + MGP_LPJ_P0038743 Fam170b protein_coding protein_coding MGP_LPJ_T0101882.1 MGP_LPJ_G0039919.1 mouse_genomes_project 14 45636044 45636399 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0039277.1 MGP_LPJ_G0021218.1 mouse_genomes_project 14 49506617 49520536 - MGP_LPJ_P0039277 Haus4 protein_coding protein_coding MGP_LPJ_T0039116.1 MGP_LPJ_G0021187.1 mouse_genomes_project 14 46528290 46536519 - MGP_LPJ_P0039116 Ndrg2 protein_coding protein_coding MGP_LPJ_T0039117.1 MGP_LPJ_G0021187.1 mouse_genomes_project 14 46528290 46536519 - MGP_LPJ_P0039117 Ndrg2 protein_coding protein_coding MGP_LPJ_T0039551.1 MGP_LPJ_G0021313.1 mouse_genomes_project 14 52758492 52776992 + MGP_LPJ_P0039551 Il17d protein_coding protein_coding MGP_LPJ_T0038312.1 MGP_LPJ_G0020939.1 mouse_genomes_project 14 13483228 13534309 - MGP_LPJ_P0038312 Ppp3cb protein_coding protein_coding MGP_LPJ_T0038313.1 MGP_LPJ_G0020939.1 mouse_genomes_project 14 13483732 13534283 - MGP_LPJ_P0038313 Ppp3cb protein_coding protein_coding MGP_LPJ_T0038314.1 MGP_LPJ_G0020939.1 mouse_genomes_project 14 13483894 13534248 - MGP_LPJ_P0038314 Ppp3cb protein_coding protein_coding MGP_LPJ_T0038315.1 MGP_LPJ_G0020939.1 mouse_genomes_project 14 13485416 13487602 - Ppp3cb protein_coding retained_intron MGP_LPJ_T0038316.1 MGP_LPJ_G0020939.1 mouse_genomes_project 14 13492567 13534176 - MGP_LPJ_P0038316 Ppp3cb protein_coding protein_coding MGP_LPJ_T0038317.1 MGP_LPJ_G0020939.1 mouse_genomes_project 14 13494345 13500914 - Ppp3cb protein_coding retained_intron MGP_LPJ_T0038318.1 MGP_LPJ_G0020939.1 mouse_genomes_project 14 13500345 13505626 - Ppp3cb protein_coding retained_intron MGP_LPJ_T0038319.1 MGP_LPJ_G0020939.1 mouse_genomes_project 14 13505512 13508943 - Ppp3cb protein_coding retained_intron MGP_LPJ_T0002737.1 MGP_LPJ_G0002609.1 mouse_genomes_project 14 47295514 47296013 + TR_V_pseudogene TR_V_pseudogene MGP_LPJ_T0035646.1 MGP_LPJ_G0019941.1 mouse_genomes_project 12 104241971 104245773 + MGP_LPJ_P0035646 Tmem251 protein_coding protein_coding MGP_LPJ_T0009860.1 MGP_LPJ_G0007978.1 mouse_genomes_project 12 111652828 111652890 + Mir136 miRNA miRNA MGP_LPJ_T0000039.1 MGP_LPJ_G0000032.1 mouse_genomes_project 12 115785262 115785310 - MGP_LPJ_P0000039 Ighj2 IG_J_gene IG_J_gene MGP_LPJ_T0000040.1 MGP_LPJ_G0000032.1 mouse_genomes_project 12 115785308 115785362 - Ighj2 IG_J_gene processed_transcript MGP_LPJ_T0100250.1 MGP_LPJ_G0038513.1 mouse_genomes_project 12 111744096 111744165 + AF357428 snoRNA snoRNA MGP_LPJ_T0035962.1 MGP_LPJ_G0020052.1 mouse_genomes_project 12 114770009 114780489 + MGP_LPJ_P0035962 A530016L24Rik protein_coding protein_coding MGP_LPJ_T0009918.1 MGP_LPJ_G0008036.1 mouse_genomes_project 12 115372203 115372303 - Gm44471 miRNA miRNA MGP_LPJ_T0035745.1 MGP_LPJ_G0019984.1 mouse_genomes_project 12 106622847 106689472 - MGP_LPJ_P0035745 Syne3 protein_coding protein_coding MGP_LPJ_T0000121.1 MGP_LPJ_G0000092.1 mouse_genomes_project 12 117688846 117689319 - MGP_LPJ_P0000121 Ighv1-47 IG_V_gene IG_V_gene MGP_LPJ_T0000122.1 MGP_LPJ_G0000092.1 mouse_genomes_project 12 117688846 117689140 - MGP_LPJ_P0000122 Ighv1-47 IG_V_gene IG_V_gene MGP_LPJ_T0034992.1 MGP_LPJ_G0019737.1 mouse_genomes_project 12 73206527 73269007 + MGP_LPJ_P0034992 Slc38a6 protein_coding protein_coding MGP_LPJ_T0034993.1 MGP_LPJ_G0019737.1 mouse_genomes_project 12 73206538 73234584 + MGP_LPJ_P0034993 Slc38a6 protein_coding protein_coding MGP_LPJ_T0034994.1 MGP_LPJ_G0019737.1 mouse_genomes_project 12 73206656 73234573 + MGP_LPJ_P0034994 Slc38a6 protein_coding protein_coding MGP_LPJ_T0034995.1 MGP_LPJ_G0019737.1 mouse_genomes_project 12 73234196 73255380 + Slc38a6 protein_coding retained_intron MGP_LPJ_T0034996.1 MGP_LPJ_G0019737.1 mouse_genomes_project 12 73259756 73266797 + Slc38a6 protein_coding retained_intron MGP_LPJ_T0099002.1 MGP_LPJ_G0037265.1 mouse_genomes_project 12 102103975 102104081 - Gm25801 snRNA snRNA MGP_LPJ_T0012790.1 MGP_LPJ_G0010881.1 mouse_genomes_project 12 47863433 47864444 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098137.1 MGP_LPJ_G0036418.1 mouse_genomes_project 12 51957213 51957332 - n-R5s58 rRNA rRNA MGP_LPJ_T0036030.1 MGP_LPJ_G0020077.1 mouse_genomes_project 12 115895457 115898051 + MGP_LPJ_P0036030 protein_coding protein_coding MGP_LPJ_T0012849.1 MGP_LPJ_G0010940.1 mouse_genomes_project 12 118337322 118337653 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101816.1 MGP_LPJ_G0039853.1 mouse_genomes_project 12 115728540 115729746 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0036042.1 MGP_LPJ_G0020081.1 mouse_genomes_project 12 119100772 119163338 - MGP_LPJ_P0036042 Wdr60 protein_coding protein_coding MGP_LPJ_T0034410.1 MGP_LPJ_G0019521.1 mouse_genomes_project 12 14827778 14872028 - MGP_LPJ_P0034410 Atp6v1c2 protein_coding protein_coding MGP_LPJ_T0034411.1 MGP_LPJ_G0019521.1 mouse_genomes_project 12 14827779 14872019 - MGP_LPJ_P0034411 Atp6v1c2 protein_coding protein_coding MGP_LPJ_T0034412.1 MGP_LPJ_G0019521.1 mouse_genomes_project 12 14827779 14871981 - MGP_LPJ_P0034412 Atp6v1c2 protein_coding nonsense_mediated_decay MGP_LPJ_T0034413.1 MGP_LPJ_G0019521.1 mouse_genomes_project 12 14827780 14852614 - MGP_LPJ_P0034413 Atp6v1c2 protein_coding protein_coding MGP_LPJ_T0034414.1 MGP_LPJ_G0019521.1 mouse_genomes_project 12 14827916 14870782 - MGP_LPJ_P0034414 Atp6v1c2 protein_coding unknown_likely_coding MGP_LPJ_T0034415.1 MGP_LPJ_G0019521.1 mouse_genomes_project 12 14842027 14876603 - MGP_LPJ_P0034415 Atp6v1c2 protein_coding protein_coding MGP_LPJ_T0034416.1 MGP_LPJ_G0019521.1 mouse_genomes_project 12 14852501 14872046 - MGP_LPJ_P0034416 Atp6v1c2 protein_coding protein_coding MGP_LPJ_T0034417.1 MGP_LPJ_G0019521.1 mouse_genomes_project 12 14852545 14876614 - MGP_LPJ_P0034417 Atp6v1c2 protein_coding protein_coding MGP_LPJ_T0006432.1 MGP_LPJ_G0005360.1 mouse_genomes_project 12 48124351 48141832 + 3110039M20Rik lincRNA lincRNA MGP_LPJ_T0006433.1 MGP_LPJ_G0005360.1 mouse_genomes_project 12 48125358 48141610 + 3110039M20Rik lincRNA lincRNA MGP_LPJ_T0035916.1 MGP_LPJ_G0020040.1 mouse_genomes_project 12 113906314 113912110 + MGP_LPJ_P0035916 Trmt61a protein_coding protein_coding MGP_LPJ_T0035917.1 MGP_LPJ_G0020040.1 mouse_genomes_project 12 113906314 113912110 + MGP_LPJ_P0035917 Trmt61a protein_coding protein_coding MGP_LPJ_T0035718.1 MGP_LPJ_G0019967.1 mouse_genomes_project 12 105621339 105637349 - MGP_LPJ_P0035718 Serpina12 protein_coding protein_coding MGP_LPJ_T0009891.1 MGP_LPJ_G0008009.1 mouse_genomes_project 12 111794675 111794790 - Gm44322 miRNA miRNA MGP_LPJ_T0098140.1 MGP_LPJ_G0036421.1 mouse_genomes_project 12 67085738 67085857 - n-R5s60 rRNA rRNA MGP_LPJ_T0012807.1 MGP_LPJ_G0010898.1 mouse_genomes_project 12 68758824 68759458 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009859.1 MGP_LPJ_G0007977.1 mouse_genomes_project 12 111652819 111652899 - Mir3071 miRNA miRNA MGP_LPJ_T0035084.1 MGP_LPJ_G0019770.1 mouse_genomes_project 12 77765267 77772630 - MGP_LPJ_P0035084 protein_coding protein_coding MGP_LPJ_T0098980.1 MGP_LPJ_G0037243.1 mouse_genomes_project 12 54975665 54975768 - Gm22296 snRNA snRNA MGP_LPJ_T0034527.1 MGP_LPJ_G0019563.1 mouse_genomes_project 12 29428676 29492018 + MGP_LPJ_P0034527 Slc26a3 protein_coding protein_coding MGP_LPJ_T0034528.1 MGP_LPJ_G0019563.1 mouse_genomes_project 12 29479260 29514837 + MGP_LPJ_P0034528 Slc26a3 protein_coding nonsense_mediated_decay MGP_LPJ_T0034529.1 MGP_LPJ_G0019563.1 mouse_genomes_project 12 29479262 29515259 + MGP_LPJ_P0034529 Slc26a3 protein_coding protein_coding MGP_LPJ_T0034530.1 MGP_LPJ_G0019563.1 mouse_genomes_project 12 29479262 29493913 + MGP_LPJ_P0034530 Slc26a3 protein_coding nonsense_mediated_decay MGP_LPJ_T0034531.1 MGP_LPJ_G0019563.1 mouse_genomes_project 12 29479276 29493939 + Slc26a3 protein_coding retained_intron MGP_LPJ_T0034532.1 MGP_LPJ_G0019563.1 mouse_genomes_project 12 29488477 29496135 + Slc26a3 protein_coding retained_intron MGP_LPJ_T0034533.1 MGP_LPJ_G0019563.1 mouse_genomes_project 12 29512213 29513165 + MGP_LPJ_P0034533 Slc26a3 protein_coding protein_coding MGP_LPJ_T0009833.1 MGP_LPJ_G0007951.1 mouse_genomes_project 12 101268458 101268536 - Gm23291 miRNA miRNA MGP_LPJ_T0034864.1 MGP_LPJ_G0019693.1 mouse_genomes_project 12 68872171 68873640 + Klhdc1 protein_coding processed_transcript MGP_LPJ_T0034865.1 MGP_LPJ_G0019693.1 mouse_genomes_project 12 68872831 68917882 + MGP_LPJ_P0034865 Klhdc1 protein_coding protein_coding MGP_LPJ_T0034866.1 MGP_LPJ_G0019693.1 mouse_genomes_project 12 68872913 68873642 + Klhdc1 protein_coding processed_transcript MGP_LPJ_T0034867.1 MGP_LPJ_G0019693.1 mouse_genomes_project 12 68872917 68916569 + MGP_LPJ_P0034867 Klhdc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0035137.1 MGP_LPJ_G0019797.1 mouse_genomes_project 12 81283676 81299740 - MGP_LPJ_P0035137 Slc10a1 protein_coding protein_coding MGP_LPJ_T0034218.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 418893 640137 + MGP_LPJ_P0034218 Dtnb protein_coding protein_coding MGP_LPJ_T0034219.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 418903 639739 + MGP_LPJ_P0034219 Dtnb protein_coding protein_coding MGP_LPJ_T0034220.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 418929 639700 + MGP_LPJ_P0034220 Dtnb protein_coding nonsense_mediated_decay MGP_LPJ_T0034221.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 418945 639739 + MGP_LPJ_P0034221 Dtnb protein_coding nonsense_mediated_decay MGP_LPJ_T0034222.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 418946 493677 + MGP_LPJ_P0034222 Dtnb protein_coding protein_coding MGP_LPJ_T0034223.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 418947 576968 + Dtnb protein_coding retained_intron MGP_LPJ_T0034224.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 418965 639736 + MGP_LPJ_P0034224 Dtnb protein_coding protein_coding MGP_LPJ_T0034225.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 418975 639483 + MGP_LPJ_P0034225 Dtnb protein_coding nonsense_mediated_decay MGP_LPJ_T0034226.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 418977 639734 + MGP_LPJ_P0034226 Dtnb protein_coding nonsense_mediated_decay MGP_LPJ_T0034227.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 418978 505836 + Dtnb protein_coding processed_transcript MGP_LPJ_T0034228.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 418982 639736 + MGP_LPJ_P0034228 Dtnb protein_coding protein_coding MGP_LPJ_T0034229.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 418987 639736 + MGP_LPJ_P0034229 Dtnb protein_coding protein_coding MGP_LPJ_T0034230.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 419035 639846 + MGP_LPJ_P0034230 Dtnb protein_coding nonsense_mediated_decay MGP_LPJ_T0034231.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 419048 445435 + MGP_LPJ_P0034231 Dtnb protein_coding protein_coding MGP_LPJ_T0034232.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 419132 608878 + MGP_LPJ_P0034232 Dtnb protein_coding nonsense_mediated_decay MGP_LPJ_T0034233.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 419496 639732 + MGP_LPJ_P0034233 Dtnb protein_coding protein_coding MGP_LPJ_T0034234.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 435676 639736 + MGP_LPJ_P0034234 Dtnb protein_coding protein_coding MGP_LPJ_T0034235.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 466987 642394 + MGP_LPJ_P0034235 Dtnb protein_coding unknown_likely_coding MGP_LPJ_T0034236.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 479531 639736 + MGP_LPJ_P0034236 Dtnb protein_coding protein_coding MGP_LPJ_T0034237.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 537127 574847 + Dtnb protein_coding retained_intron MGP_LPJ_T0034238.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 575418 606451 + Dtnb protein_coding processed_transcript MGP_LPJ_T0034239.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 606265 639483 + Dtnb protein_coding retained_intron MGP_LPJ_T0034240.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 606519 639739 + MGP_LPJ_P0034240 Dtnb protein_coding protein_coding MGP_LPJ_T0034241.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 632655 639739 + Dtnb protein_coding processed_transcript MGP_LPJ_T0034242.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 632865 639738 + Dtnb protein_coding retained_intron MGP_LPJ_T0034243.1 MGP_LPJ_G0019461.1 mouse_genomes_project 12 637888 639739 + Dtnb protein_coding retained_intron MGP_LPJ_T0100259.1 MGP_LPJ_G0038522.1 mouse_genomes_project 12 113757445 113757572 + Snora28 snoRNA snoRNA MGP_LPJ_T0006486.1 MGP_LPJ_G0005405.1 mouse_genomes_project 12 109068793 109071973 + Gm2800 lincRNA lincRNA MGP_LPJ_T0034991.1 MGP_LPJ_G0019736.1 mouse_genomes_project 12 73200199 73206460 - MGP_LPJ_P0034991 Trmt5 protein_coding protein_coding MGP_LPJ_T0034644.1 MGP_LPJ_G0019604.1 mouse_genomes_project 12 38575856 38595890 - MGP_LPJ_P0034644 Lsmem1 protein_coding protein_coding MGP_LPJ_T0009883.1 MGP_LPJ_G0008001.1 mouse_genomes_project 12 111789285 111789371 + Mir376c miRNA miRNA MGP_LPJ_T0009920.1 MGP_LPJ_G0008038.1 mouse_genomes_project 12 117084287 117084347 - Mir7094-1 miRNA miRNA MGP_LPJ_T0006490.1 MGP_LPJ_G0005408.1 mouse_genomes_project 12 110292736 110310446 - 4930478K11Rik lincRNA lincRNA MGP_LPJ_T0009895.1 MGP_LPJ_G0008013.1 mouse_genomes_project 12 111800338 111800414 + Mir382 miRNA miRNA MGP_LPJ_T0100258.1 MGP_LPJ_G0038521.1 mouse_genomes_project 12 111753931 111753999 + Gm25224 snoRNA snoRNA MGP_LPJ_T0034762.1 MGP_LPJ_G0019659.1 mouse_genomes_project 12 55813893 56321073 - MGP_LPJ_P0034762 Slc25a21 protein_coding protein_coding MGP_LPJ_T0034763.1 MGP_LPJ_G0019659.1 mouse_genomes_project 12 55815054 56277957 - MGP_LPJ_P0034763 Slc25a21 protein_coding protein_coding MGP_LPJ_T0034764.1 MGP_LPJ_G0019659.1 mouse_genomes_project 12 55829615 55876355 - Slc25a21 protein_coding processed_transcript MGP_LPJ_T0034765.1 MGP_LPJ_G0019659.1 mouse_genomes_project 12 55874507 56092146 - Slc25a21 protein_coding retained_intron MGP_LPJ_T0100193.1 MGP_LPJ_G0038456.1 mouse_genomes_project 12 10535679 10535814 - Gm24208 snoRNA snoRNA MGP_LPJ_T0034956.1 MGP_LPJ_G0019725.1 mouse_genomes_project 12 72043687 72067659 - Rtn1 protein_coding processed_transcript MGP_LPJ_T0034957.1 MGP_LPJ_G0019725.1 mouse_genomes_project 12 72043687 72251539 - MGP_LPJ_P0034957 Rtn1 protein_coding protein_coding MGP_LPJ_T0034958.1 MGP_LPJ_G0019725.1 mouse_genomes_project 12 72043688 72068644 - MGP_LPJ_P0034958 Rtn1 protein_coding protein_coding MGP_LPJ_T0034959.1 MGP_LPJ_G0019725.1 mouse_genomes_project 12 72044227 72068644 - MGP_LPJ_P0034959 Rtn1 protein_coding protein_coding MGP_LPJ_T0034960.1 MGP_LPJ_G0019725.1 mouse_genomes_project 12 72055245 72068606 - Rtn1 protein_coding processed_transcript MGP_LPJ_T0097983.1 MGP_LPJ_G0036264.1 mouse_genomes_project 12 84647683 84648294 - pseudogene pseudogene MGP_LPJ_T0034244.1 MGP_LPJ_G0019462.1 mouse_genomes_project 12 665091 699414 + Dnmt3a protein_coding retained_intron MGP_LPJ_T0034245.1 MGP_LPJ_G0019462.1 mouse_genomes_project 12 665582 728346 + Dnmt3a protein_coding retained_intron MGP_LPJ_T0034246.1 MGP_LPJ_G0019462.1 mouse_genomes_project 12 665611 734243 + MGP_LPJ_P0034246 Dnmt3a protein_coding protein_coding MGP_LPJ_T0034247.1 MGP_LPJ_G0019462.1 mouse_genomes_project 12 666159 757821 + MGP_LPJ_P0034247 Dnmt3a protein_coding protein_coding MGP_LPJ_T0034248.1 MGP_LPJ_G0019462.1 mouse_genomes_project 12 691591 770134 + MGP_LPJ_P0034248 Dnmt3a protein_coding protein_coding MGP_LPJ_T0034249.1 MGP_LPJ_G0019462.1 mouse_genomes_project 12 709612 769807 + MGP_LPJ_P0034249 Dnmt3a protein_coding nonsense_mediated_decay MGP_LPJ_T0034250.1 MGP_LPJ_G0019462.1 mouse_genomes_project 12 721930 727072 + MGP_LPJ_P0034250 Dnmt3a protein_coding protein_coding MGP_LPJ_T0034251.1 MGP_LPJ_G0019462.1 mouse_genomes_project 12 727100 736924 + MGP_LPJ_P0034251 Dnmt3a protein_coding protein_coding MGP_LPJ_T0034252.1 MGP_LPJ_G0019462.1 mouse_genomes_project 12 746316 756947 + MGP_LPJ_P0034252 Dnmt3a protein_coding protein_coding MGP_LPJ_T0034253.1 MGP_LPJ_G0019462.1 mouse_genomes_project 12 752594 769762 + MGP_LPJ_P0034253 Dnmt3a protein_coding protein_coding MGP_LPJ_T0034254.1 MGP_LPJ_G0019462.1 mouse_genomes_project 12 755649 756502 + MGP_LPJ_P0034254 Dnmt3a protein_coding protein_coding MGP_LPJ_T0034255.1 MGP_LPJ_G0019462.1 mouse_genomes_project 12 755694 757802 + MGP_LPJ_P0034255 Dnmt3a protein_coding protein_coding MGP_LPJ_T0034256.1 MGP_LPJ_G0019462.1 mouse_genomes_project 12 756418 758191 + MGP_LPJ_P0034256 Dnmt3a protein_coding protein_coding MGP_LPJ_T0034257.1 MGP_LPJ_G0019462.1 mouse_genomes_project 12 758245 761302 + Dnmt3a protein_coding retained_intron MGP_LPJ_T0034258.1 MGP_LPJ_G0019462.1 mouse_genomes_project 12 761897 768712 + MGP_LPJ_P0034258 Dnmt3a protein_coding nonsense_mediated_decay MGP_LPJ_T0034259.1 MGP_LPJ_G0019462.1 mouse_genomes_project 12 768735 770467 + MGP_LPJ_P0034259 Dnmt3a protein_coding protein_coding MGP_LPJ_T0000147.1 MGP_LPJ_G0000108.1 mouse_genomes_project 12 118874473 118874905 - MGP_LPJ_P0000147 IG_V_gene IG_V_gene MGP_LPJ_T0035402.1 MGP_LPJ_G0019871.1 mouse_genomes_project 12 86948234 86997837 + MGP_LPJ_P0035402 Gpatch2l protein_coding protein_coding MGP_LPJ_T0009813.1 MGP_LPJ_G0007931.1 mouse_genomes_project 12 69004309 69004389 - miRNA miRNA MGP_LPJ_T0100254.1 MGP_LPJ_G0038517.1 mouse_genomes_project 12 111747146 111747221 + Gm25856 snoRNA snoRNA MGP_LPJ_T0006440.1 MGP_LPJ_G0005367.1 mouse_genomes_project 12 71172037 71173092 - 1700083H02Rik lincRNA lincRNA MGP_LPJ_T0035674.1 MGP_LPJ_G0019950.1 mouse_genomes_project 12 104915315 104932762 + MGP_LPJ_P0035674 Otub2 protein_coding protein_coding MGP_LPJ_T0035675.1 MGP_LPJ_G0019950.1 mouse_genomes_project 12 104915331 104932768 + MGP_LPJ_P0035675 Otub2 protein_coding protein_coding MGP_LPJ_T0035676.1 MGP_LPJ_G0019950.1 mouse_genomes_project 12 104915399 104932768 + Otub2 protein_coding retained_intron MGP_LPJ_T0035677.1 MGP_LPJ_G0019950.1 mouse_genomes_project 12 104915618 104929324 + MGP_LPJ_P0035677 Otub2 protein_coding protein_coding MGP_LPJ_T0035678.1 MGP_LPJ_G0019950.1 mouse_genomes_project 12 104919287 104932773 + MGP_LPJ_P0035678 Otub2 protein_coding protein_coding MGP_LPJ_T0000900.1 MGP_LPJ_G0000829.1 mouse_genomes_project 12 90114932 90119505 - TEC TEC MGP_LPJ_T0003428.1 MGP_LPJ_G0003148.1 mouse_genomes_project 12 84152304 84155480 - antisense antisense MGP_LPJ_T0017243.1 MGP_LPJ_G0015145.1 mouse_genomes_project 12 73881672 73904814 - Gm15283 processed_transcript processed_transcript MGP_LPJ_T0006523.1 MGP_LPJ_G0005419.1 mouse_genomes_project 12 113627776 113631849 - Gm10425 lincRNA lincRNA MGP_LPJ_T0000036.1 MGP_LPJ_G0000029.1 mouse_genomes_project 12 115945488 115945498 - IG_D_pseudogene IG_D_pseudogene MGP_LPJ_T0012791.1 MGP_LPJ_G0010882.1 mouse_genomes_project 12 48583149 48584144 - processed_pseudogene processed_pseudogene MGP_LPJ_T0034756.1 MGP_LPJ_G0019656.1 mouse_genomes_project 12 55611186 55614314 - MGP_LPJ_P0034756 Nkx2-1 protein_coding protein_coding MGP_LPJ_T0034757.1 MGP_LPJ_G0019656.1 mouse_genomes_project 12 55611186 55617152 - MGP_LPJ_P0034757 Nkx2-1 protein_coding protein_coding MGP_LPJ_T0100243.1 MGP_LPJ_G0038506.1 mouse_genomes_project 12 111715594 111715667 + DQ267101 snoRNA snoRNA MGP_LPJ_T0000133.1 MGP_LPJ_G0000098.1 mouse_genomes_project 12 118395196 118395490 - MGP_LPJ_P0000133 Ighv1-67 IG_V_gene IG_V_gene MGP_LPJ_T0000134.1 MGP_LPJ_G0000098.1 mouse_genomes_project 12 118395196 118395633 - MGP_LPJ_P0000134 Ighv1-67 IG_V_gene IG_V_gene MGP_LPJ_T0098991.1 MGP_LPJ_G0037254.1 mouse_genomes_project 12 76510372 76510446 - Gm25563 snRNA snRNA MGP_LPJ_T0034401.1 MGP_LPJ_G0019518.1 mouse_genomes_project 12 14530282 14540131 - MGP_LPJ_P0034401 2410004P03Rik protein_coding protein_coding MGP_LPJ_T0034402.1 MGP_LPJ_G0019518.1 mouse_genomes_project 12 14532552 14539958 - MGP_LPJ_P0034402 2410004P03Rik protein_coding protein_coding MGP_LPJ_T0034403.1 MGP_LPJ_G0019518.1 mouse_genomes_project 12 14534101 14539907 - MGP_LPJ_P0034403 2410004P03Rik protein_coding protein_coding MGP_LPJ_T0034658.1 MGP_LPJ_G0019607.1 mouse_genomes_project 12 38734163 38859962 - MGP_LPJ_P0034658 Zfp277 protein_coding protein_coding MGP_LPJ_T0034659.1 MGP_LPJ_G0019607.1 mouse_genomes_project 12 38734675 38859941 - MGP_LPJ_P0034659 Zfp277 protein_coding protein_coding MGP_LPJ_T0035702.1 MGP_LPJ_G0019959.1 mouse_genomes_project 12 105223953 105231277 - MGP_LPJ_P0035702 Serpina16 protein_coding protein_coding MGP_LPJ_T0035703.1 MGP_LPJ_G0019959.1 mouse_genomes_project 12 105224041 105230602 - MGP_LPJ_P0035703 Serpina16 protein_coding protein_coding MGP_LPJ_T0098996.1 MGP_LPJ_G0037259.1 mouse_genomes_project 12 80925685 80925789 - Gm23817 snRNA snRNA MGP_LPJ_T0034352.1 MGP_LPJ_G0019497.1 mouse_genomes_project 12 7590397 7610368 + MGP_LPJ_P0034352 Nt5c1b protein_coding nonsense_mediated_decay MGP_LPJ_T0034353.1 MGP_LPJ_G0019497.1 mouse_genomes_project 12 7590403 7610371 + MGP_LPJ_P0034353 Nt5c1b protein_coding protein_coding MGP_LPJ_T0034354.1 MGP_LPJ_G0019497.1 mouse_genomes_project 12 7590403 7595501 + MGP_LPJ_P0034354 Nt5c1b protein_coding protein_coding MGP_LPJ_T0034355.1 MGP_LPJ_G0019497.1 mouse_genomes_project 12 7590468 7610368 + MGP_LPJ_P0034355 Nt5c1b protein_coding protein_coding MGP_LPJ_T0000272.1 MGP_LPJ_G0000210.1 mouse_genomes_project 12 116328215 116328527 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0000281.1 MGP_LPJ_G0000219.1 mouse_genomes_project 12 116925873 116926306 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0101811.1 MGP_LPJ_G0039848.1 mouse_genomes_project 12 105355603 105374235 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0003437.1 MGP_LPJ_G0003156.1 mouse_genomes_project 12 104838043 104839682 - Gm29508 antisense antisense MGP_LPJ_T0003438.1 MGP_LPJ_G0003156.1 mouse_genomes_project 12 104838044 104840446 - Gm29508 antisense antisense MGP_LPJ_T0034513.1 MGP_LPJ_G0019558.1 mouse_genomes_project 12 28932599 28982196 + Sh3yl1 protein_coding retained_intron MGP_LPJ_T0034514.1 MGP_LPJ_G0019558.1 mouse_genomes_project 12 28932599 28982340 + MGP_LPJ_P0034514 Sh3yl1 protein_coding protein_coding MGP_LPJ_T0034515.1 MGP_LPJ_G0019558.1 mouse_genomes_project 12 28932623 28982329 + MGP_LPJ_P0034515 Sh3yl1 protein_coding protein_coding MGP_LPJ_T0034516.1 MGP_LPJ_G0019558.1 mouse_genomes_project 12 28933118 28982334 + Sh3yl1 protein_coding processed_transcript MGP_LPJ_T0000265.1 MGP_LPJ_G0000203.1 mouse_genomes_project 12 116109986 116110360 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0034767.1 MGP_LPJ_G0019661.1 mouse_genomes_project 12 56362003 56446962 + Mipol1 protein_coding retained_intron MGP_LPJ_T0034768.1 MGP_LPJ_G0019661.1 mouse_genomes_project 12 56362010 56493219 + Mipol1 protein_coding retained_intron MGP_LPJ_T0034769.1 MGP_LPJ_G0019661.1 mouse_genomes_project 12 56362012 56464342 + Mipol1 protein_coding retained_intron MGP_LPJ_T0034770.1 MGP_LPJ_G0019661.1 mouse_genomes_project 12 56362022 56646498 + MGP_LPJ_P0034770 Mipol1 protein_coding protein_coding MGP_LPJ_T0034771.1 MGP_LPJ_G0019661.1 mouse_genomes_project 12 56362022 56604120 + MGP_LPJ_P0034771 Mipol1 protein_coding protein_coding MGP_LPJ_T0034772.1 MGP_LPJ_G0019661.1 mouse_genomes_project 12 56362067 56508283 + Mipol1 protein_coding retained_intron MGP_LPJ_T0034773.1 MGP_LPJ_G0019661.1 mouse_genomes_project 12 56418686 56613896 + MGP_LPJ_P0034773 Mipol1 protein_coding protein_coding MGP_LPJ_T0034774.1 MGP_LPJ_G0019661.1 mouse_genomes_project 12 56434087 56645823 + MGP_LPJ_P0034774 Mipol1 protein_coding protein_coding MGP_LPJ_T0034775.1 MGP_LPJ_G0019661.1 mouse_genomes_project 12 56444640 56446234 + Mipol1 protein_coding retained_intron MGP_LPJ_T0034776.1 MGP_LPJ_G0019661.1 mouse_genomes_project 12 56470743 56507702 + Mipol1 protein_coding processed_transcript MGP_LPJ_T0098960.1 MGP_LPJ_G0037223.1 mouse_genomes_project 12 1931678 1931781 - Gm23167 snRNA snRNA MGP_LPJ_T0003426.1 MGP_LPJ_G0003146.1 mouse_genomes_project 12 83390384 83397019 - 1700085C21Rik antisense antisense MGP_LPJ_T0003390.1 MGP_LPJ_G0003122.1 mouse_genomes_project 12 44788 53496 + Rab10os antisense antisense MGP_LPJ_T0003391.1 MGP_LPJ_G0003122.1 mouse_genomes_project 12 44810 62463 + Rab10os antisense antisense MGP_LPJ_T0003392.1 MGP_LPJ_G0003122.1 mouse_genomes_project 12 44810 50359 + Rab10os antisense antisense MGP_LPJ_T0003393.1 MGP_LPJ_G0003122.1 mouse_genomes_project 12 46939 62462 + Rab10os antisense antisense MGP_LPJ_T0003394.1 MGP_LPJ_G0003122.1 mouse_genomes_project 12 46980 51320 + Rab10os antisense antisense MGP_LPJ_T0003395.1 MGP_LPJ_G0003122.1 mouse_genomes_project 12 47063 62030 + Rab10os antisense antisense MGP_LPJ_T0003396.1 MGP_LPJ_G0003122.1 mouse_genomes_project 12 47745 62085 + Rab10os antisense antisense MGP_LPJ_T0100202.1 MGP_LPJ_G0038465.1 mouse_genomes_project 12 31594436 31594568 - Gm23529 snoRNA snoRNA MGP_LPJ_T0035767.1 MGP_LPJ_G0019997.1 mouse_genomes_project 12 107573843 107625752 + MGP_LPJ_P0035767 Papola protein_coding protein_coding MGP_LPJ_T0035768.1 MGP_LPJ_G0019997.1 mouse_genomes_project 12 107573850 107600466 + Papola protein_coding processed_transcript MGP_LPJ_T0035769.1 MGP_LPJ_G0019997.1 mouse_genomes_project 12 107573855 107627990 + MGP_LPJ_P0035769 Papola protein_coding protein_coding MGP_LPJ_T0035770.1 MGP_LPJ_G0019997.1 mouse_genomes_project 12 107573872 107604988 + Papola protein_coding retained_intron MGP_LPJ_T0035771.1 MGP_LPJ_G0019997.1 mouse_genomes_project 12 107573877 107627717 + MGP_LPJ_P0035771 Papola protein_coding nonsense_mediated_decay MGP_LPJ_T0035772.1 MGP_LPJ_G0019997.1 mouse_genomes_project 12 107573879 107600628 + Papola protein_coding processed_transcript MGP_LPJ_T0035773.1 MGP_LPJ_G0019997.1 mouse_genomes_project 12 107573882 107629803 + MGP_LPJ_P0035773 Papola protein_coding nonsense_mediated_decay MGP_LPJ_T0035774.1 MGP_LPJ_G0019997.1 mouse_genomes_project 12 107573884 107597508 + MGP_LPJ_P0035774 Papola protein_coding nonsense_mediated_decay MGP_LPJ_T0035775.1 MGP_LPJ_G0019997.1 mouse_genomes_project 12 107573896 107600628 + MGP_LPJ_P0035775 Papola protein_coding protein_coding MGP_LPJ_T0035776.1 MGP_LPJ_G0019997.1 mouse_genomes_project 12 107574011 107628132 + MGP_LPJ_P0035776 Papola protein_coding protein_coding MGP_LPJ_T0035777.1 MGP_LPJ_G0019997.1 mouse_genomes_project 12 107574046 107629808 + MGP_LPJ_P0035777 Papola protein_coding protein_coding MGP_LPJ_T0035778.1 MGP_LPJ_G0019997.1 mouse_genomes_project 12 107590612 107602331 + Papola protein_coding retained_intron MGP_LPJ_T0035779.1 MGP_LPJ_G0019997.1 mouse_genomes_project 12 107599532 107611298 + MGP_LPJ_P0035779 Papola protein_coding nonsense_mediated_decay MGP_LPJ_T0035780.1 MGP_LPJ_G0019997.1 mouse_genomes_project 12 107600242 107600628 + Papola protein_coding retained_intron MGP_LPJ_T0035781.1 MGP_LPJ_G0019997.1 mouse_genomes_project 12 107603218 107627969 + MGP_LPJ_P0035781 Papola protein_coding protein_coding MGP_LPJ_T0035782.1 MGP_LPJ_G0019997.1 mouse_genomes_project 12 107603269 107620105 + MGP_LPJ_P0035782 Papola protein_coding protein_coding MGP_LPJ_T0035783.1 MGP_LPJ_G0019997.1 mouse_genomes_project 12 107608798 107609749 + Papola protein_coding retained_intron MGP_LPJ_T0035784.1 MGP_LPJ_G0019997.1 mouse_genomes_project 12 107619925 107626358 + MGP_LPJ_P0035784 Papola protein_coding protein_coding MGP_LPJ_T0017255.1 MGP_LPJ_G0015154.1 mouse_genomes_project 12 111662549 111666095 + Rian processed_transcript lincRNA MGP_LPJ_T0017256.1 MGP_LPJ_G0015154.1 mouse_genomes_project 12 111662554 111707603 + Rian processed_transcript lincRNA MGP_LPJ_T0017257.1 MGP_LPJ_G0015154.1 mouse_genomes_project 12 111662655 111687379 + Rian processed_transcript lincRNA MGP_LPJ_T0017258.1 MGP_LPJ_G0015154.1 mouse_genomes_project 12 111679994 111708548 + Rian processed_transcript lincRNA MGP_LPJ_T0017259.1 MGP_LPJ_G0015154.1 mouse_genomes_project 12 111679994 111694369 + Rian processed_transcript lincRNA MGP_LPJ_T0017260.1 MGP_LPJ_G0015154.1 mouse_genomes_project 12 111684777 111707669 + Rian processed_transcript lincRNA MGP_LPJ_T0017261.1 MGP_LPJ_G0015154.1 mouse_genomes_project 12 111692934 111696410 + Rian processed_transcript lincRNA MGP_LPJ_T0017262.1 MGP_LPJ_G0015154.1 mouse_genomes_project 12 111694095 111703601 + Rian processed_transcript lincRNA MGP_LPJ_T0017263.1 MGP_LPJ_G0015154.1 mouse_genomes_project 12 111694339 111708471 + Rian processed_transcript lincRNA MGP_LPJ_T0017264.1 MGP_LPJ_G0015154.1 mouse_genomes_project 12 111704078 111707650 + Rian processed_transcript TEC MGP_LPJ_T0017265.1 MGP_LPJ_G0015154.1 mouse_genomes_project 12 111708348 111725890 + Rian processed_transcript lincRNA MGP_LPJ_T0017266.1 MGP_LPJ_G0015154.1 mouse_genomes_project 12 111708369 111719180 + Rian processed_transcript lincRNA MGP_LPJ_T0017267.1 MGP_LPJ_G0015154.1 mouse_genomes_project 12 111708845 111723978 + Rian processed_transcript lincRNA MGP_LPJ_T0017268.1 MGP_LPJ_G0015154.1 mouse_genomes_project 12 111713341 111714522 + Rian processed_transcript lincRNA MGP_LPJ_T0017269.1 MGP_LPJ_G0015154.1 mouse_genomes_project 12 111714239 111720040 + Rian processed_transcript lincRNA MGP_LPJ_T0017270.1 MGP_LPJ_G0015154.1 mouse_genomes_project 12 111714851 111725196 + Rian processed_transcript lincRNA MGP_LPJ_T0017271.1 MGP_LPJ_G0015154.1 mouse_genomes_project 12 111714855 111720061 + Rian processed_transcript lincRNA MGP_LPJ_T0017272.1 MGP_LPJ_G0015154.1 mouse_genomes_project 12 111715183 111723924 + Rian processed_transcript lincRNA MGP_LPJ_T0017273.1 MGP_LPJ_G0015154.1 mouse_genomes_project 12 111721458 111723301 + Rian processed_transcript TEC MGP_LPJ_T0035448.1 MGP_LPJ_G0019886.1 mouse_genomes_project 12 88047369 88054621 + MGP_LPJ_P0035448 Ahsa1 protein_coding protein_coding MGP_LPJ_T0034937.1 MGP_LPJ_G0019718.1 mouse_genomes_project 12 70904095 71021517 + MGP_LPJ_P0034937 2700049A03Rik protein_coding protein_coding MGP_LPJ_T0034938.1 MGP_LPJ_G0019718.1 mouse_genomes_project 12 70904095 71021517 + MGP_LPJ_P0034938 2700049A03Rik protein_coding protein_coding MGP_LPJ_T0034939.1 MGP_LPJ_G0019718.1 mouse_genomes_project 12 70922675 70927093 + MGP_LPJ_P0034939 2700049A03Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0034940.1 MGP_LPJ_G0019718.1 mouse_genomes_project 12 70944351 71021513 + MGP_LPJ_P0034940 2700049A03Rik protein_coding protein_coding MGP_LPJ_T0034447.1 MGP_LPJ_G0019533.1 mouse_genomes_project 12 22399322 22410803 + MGP_LPJ_P0034447 Klf11 protein_coding protein_coding MGP_LPJ_T0034448.1 MGP_LPJ_G0019533.1 mouse_genomes_project 12 22399847 22403074 + MGP_LPJ_P0034448 Klf11 protein_coding protein_coding MGP_LPJ_T0034449.1 MGP_LPJ_G0019533.1 mouse_genomes_project 12 22399847 22401745 + MGP_LPJ_P0034449 Klf11 protein_coding protein_coding MGP_LPJ_T0034450.1 MGP_LPJ_G0019533.1 mouse_genomes_project 12 22400104 22403069 + MGP_LPJ_P0034450 Klf11 protein_coding protein_coding MGP_LPJ_T0100249.1 MGP_LPJ_G0038512.1 mouse_genomes_project 12 111738086 111738168 + Gm23347 snoRNA snoRNA MGP_LPJ_T0034883.1 MGP_LPJ_G0019700.1 mouse_genomes_project 12 69341186 69374893 - MGP_LPJ_P0034883 L2hgdh protein_coding protein_coding MGP_LPJ_T0035632.1 MGP_LPJ_G0019934.1 mouse_genomes_project 12 103882458 103907750 - MGP_LPJ_P0035632 Lgmn protein_coding protein_coding MGP_LPJ_T0035633.1 MGP_LPJ_G0019934.1 mouse_genomes_project 12 103882472 103923124 - MGP_LPJ_P0035633 Lgmn protein_coding protein_coding MGP_LPJ_T0035634.1 MGP_LPJ_G0019934.1 mouse_genomes_project 12 103889401 103895837 - Lgmn protein_coding retained_intron MGP_LPJ_T0034642.1 MGP_LPJ_G0019603.1 mouse_genomes_project 12 38452509 38528648 - MGP_LPJ_P0034642 Scin protein_coding protein_coding MGP_LPJ_T0034643.1 MGP_LPJ_G0019603.1 mouse_genomes_project 12 38452513 38528693 - MGP_LPJ_P0034643 Scin protein_coding protein_coding MGP_LPJ_T0035759.1 MGP_LPJ_G0019992.1 mouse_genomes_project 12 107337432 107371853 + MGP_LPJ_P0035759 Bdkrb2 protein_coding protein_coding MGP_LPJ_T0035373.1 MGP_LPJ_G0019865.1 mouse_genomes_project 12 86357152 86382031 + MGP_LPJ_P0035373 Batf protein_coding protein_coding MGP_LPJ_T0000079.1 MGP_LPJ_G0000064.1 mouse_genomes_project 12 116605971 116606448 - MGP_LPJ_P0000079 Ighv14-3 IG_V_gene IG_V_gene MGP_LPJ_T0035991.1 MGP_LPJ_G0020065.1 mouse_genomes_project 12 115214973 115235878 - MGP_LPJ_P0035991 Jag2 protein_coding protein_coding MGP_LPJ_T0036021.1 MGP_LPJ_G0020075.1 mouse_genomes_project 12 115472794 115480915 + MGP_LPJ_P0036021 4930427A07Rik protein_coding protein_coding MGP_LPJ_T0036022.1 MGP_LPJ_G0020075.1 mouse_genomes_project 12 115472803 115473300 + 4930427A07Rik protein_coding retained_intron MGP_LPJ_T0036023.1 MGP_LPJ_G0020075.1 mouse_genomes_project 12 115472813 115482403 + MGP_LPJ_P0036023 4930427A07Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0036024.1 MGP_LPJ_G0020075.1 mouse_genomes_project 12 115472829 115473963 + 4930427A07Rik protein_coding retained_intron MGP_LPJ_T0036025.1 MGP_LPJ_G0020075.1 mouse_genomes_project 12 115472879 115478186 + MGP_LPJ_P0036025 4930427A07Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0036026.1 MGP_LPJ_G0020075.1 mouse_genomes_project 12 115473944 115480918 + 4930427A07Rik protein_coding retained_intron MGP_LPJ_T0034826.1 MGP_LPJ_G0019674.1 mouse_genomes_project 12 62142879 62143302 + MGP_LPJ_P0034826 Spanxn4 protein_coding protein_coding MGP_LPJ_T0035120.1 MGP_LPJ_G0019790.1 mouse_genomes_project 12 80816787 80904175 + MGP_LPJ_P0035120 Galnt16 protein_coding protein_coding MGP_LPJ_T0035922.1 MGP_LPJ_G0020042.1 mouse_genomes_project 12 113942830 113973320 + MGP_LPJ_P0035922 Apopt1 protein_coding protein_coding MGP_LPJ_T0035923.1 MGP_LPJ_G0020042.1 mouse_genomes_project 12 113942849 113998730 + MGP_LPJ_P0035923 Apopt1 protein_coding protein_coding MGP_LPJ_T0035924.1 MGP_LPJ_G0020042.1 mouse_genomes_project 12 113942849 113993811 + MGP_LPJ_P0035924 Apopt1 protein_coding protein_coding MGP_LPJ_T0035925.1 MGP_LPJ_G0020042.1 mouse_genomes_project 12 113942853 113957378 + MGP_LPJ_P0035925 Apopt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0035926.1 MGP_LPJ_G0020042.1 mouse_genomes_project 12 113942855 113963546 + MGP_LPJ_P0035926 Apopt1 protein_coding protein_coding MGP_LPJ_T0035129.1 MGP_LPJ_G0019795.1 mouse_genomes_project 12 81105020 81199822 + MGP_LPJ_P0035129 Susd6 protein_coding protein_coding MGP_LPJ_T0098139.1 MGP_LPJ_G0036420.1 mouse_genomes_project 12 55126385 55126505 - Gm23799 rRNA rRNA MGP_LPJ_T0034862.1 MGP_LPJ_G0019691.1 mouse_genomes_project 12 68821970 68824622 + MGP_LPJ_P0034862 9330151L19Rik protein_coding protein_coding MGP_LPJ_T0035992.1 MGP_LPJ_G0020066.1 mouse_genomes_project 12 115241136 115248529 - MGP_LPJ_P0035992 Nudt14 protein_coding protein_coding MGP_LPJ_T0035091.1 MGP_LPJ_G0019775.1 mouse_genomes_project 12 79063577 79088764 + MGP_LPJ_P0035091 Eif2s1 protein_coding protein_coding MGP_LPJ_T0006464.1 MGP_LPJ_G0005387.1 mouse_genomes_project 12 100427535 100428942 + Gm28933 lincRNA lincRNA MGP_LPJ_T0036068.1 MGP_LPJ_G0020093.1 mouse_genomes_project 12 122916416 122991322 + MGP_LPJ_P0036068 Tmem196 protein_coding protein_coding MGP_LPJ_T0036069.1 MGP_LPJ_G0020093.1 mouse_genomes_project 12 122916868 122990850 + MGP_LPJ_P0036069 Tmem196 protein_coding protein_coding MGP_LPJ_T0036070.1 MGP_LPJ_G0020093.1 mouse_genomes_project 12 122916882 122986922 + MGP_LPJ_P0036070 Tmem196 protein_coding nonsense_mediated_decay MGP_LPJ_T0036071.1 MGP_LPJ_G0020093.1 mouse_genomes_project 12 122917016 122990743 + MGP_LPJ_P0036071 Tmem196 protein_coding protein_coding MGP_LPJ_T0036072.1 MGP_LPJ_G0020093.1 mouse_genomes_project 12 122917028 122991091 + MGP_LPJ_P0036072 Tmem196 protein_coding protein_coding MGP_LPJ_T0034841.1 MGP_LPJ_G0019683.1 mouse_genomes_project 12 64732023 64735415 + MGP_LPJ_P0034841 Wdr20rt protein_coding protein_coding MGP_LPJ_T0034863.1 MGP_LPJ_G0019692.1 mouse_genomes_project 12 68828970 68858140 - MGP_LPJ_P0034863 Pole2 protein_coding protein_coding MGP_LPJ_T0035444.1 MGP_LPJ_G0019884.1 mouse_genomes_project 12 88000963 88013232 - MGP_LPJ_P0035444 Noxred1 protein_coding protein_coding MGP_LPJ_T0000260.1 MGP_LPJ_G0000198.1 mouse_genomes_project 12 116020886 116201204 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0000311.1 MGP_LPJ_G0000249.1 mouse_genomes_project 12 118874472 118874905 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0035635.1 MGP_LPJ_G0019935.1 mouse_genomes_project 12 103951997 103976865 + MGP_LPJ_P0035635 Golga5 protein_coding protein_coding MGP_LPJ_T0035636.1 MGP_LPJ_G0019935.1 mouse_genomes_project 12 103952773 103976861 + MGP_LPJ_P0035636 Golga5 protein_coding protein_coding MGP_LPJ_T0012812.1 MGP_LPJ_G0010903.1 mouse_genomes_project 12 79377517 79377945 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006492.1 MGP_LPJ_G0005410.1 mouse_genomes_project 12 111594043 111599034 + Meg3 lincRNA lincRNA MGP_LPJ_T0006493.1 MGP_LPJ_G0005410.1 mouse_genomes_project 12 111594047 111627483 + Meg3 lincRNA lincRNA MGP_LPJ_T0006494.1 MGP_LPJ_G0005410.1 mouse_genomes_project 12 111594049 111614951 + Meg3 lincRNA lincRNA MGP_LPJ_T0006495.1 MGP_LPJ_G0005410.1 mouse_genomes_project 12 111595065 111617444 + Meg3 lincRNA lincRNA MGP_LPJ_T0006496.1 MGP_LPJ_G0005410.1 mouse_genomes_project 12 111595310 111598022 + Meg3 lincRNA lincRNA MGP_LPJ_T0006498.1 MGP_LPJ_G0005410.1 mouse_genomes_project 12 111598212 111614082 + Meg3 lincRNA lincRNA MGP_LPJ_T0006499.1 MGP_LPJ_G0005410.1 mouse_genomes_project 12 111599203 111627488 + Meg3 lincRNA lincRNA MGP_LPJ_T0006500.1 MGP_LPJ_G0005410.1 mouse_genomes_project 12 111600196 111627481 + Meg3 lincRNA lincRNA MGP_LPJ_T0006501.1 MGP_LPJ_G0005410.1 mouse_genomes_project 12 111600250 111627484 + Meg3 lincRNA lincRNA MGP_LPJ_T0006502.1 MGP_LPJ_G0005410.1 mouse_genomes_project 12 111604942 111614565 + Meg3 lincRNA lincRNA MGP_LPJ_T0006503.1 MGP_LPJ_G0005410.1 mouse_genomes_project 12 111605031 111605552 + Meg3 lincRNA lincRNA MGP_LPJ_T0012833.1 MGP_LPJ_G0010924.1 mouse_genomes_project 12 105191190 105191854 - processed_pseudogene processed_pseudogene MGP_LPJ_T0034831.1 MGP_LPJ_G0019679.1 mouse_genomes_project 12 64534774 64564119 + MGP_LPJ_P0034831 Prpf39 protein_coding protein_coding MGP_LPJ_T0034832.1 MGP_LPJ_G0019679.1 mouse_genomes_project 12 64534807 64564119 + MGP_LPJ_P0034832 Prpf39 protein_coding nonsense_mediated_decay MGP_LPJ_T0035661.1 MGP_LPJ_G0019947.1 mouse_genomes_project 12 104713823 104763121 - MGP_LPJ_P0035661 Prima1 protein_coding unknown_likely_coding MGP_LPJ_T0035662.1 MGP_LPJ_G0019947.1 mouse_genomes_project 12 104716286 104722273 - Prima1 protein_coding processed_transcript MGP_LPJ_T0035663.1 MGP_LPJ_G0019947.1 mouse_genomes_project 12 104716286 104762922 - MGP_LPJ_P0035663 Prima1 protein_coding nonsense_mediated_decay MGP_LPJ_T0035664.1 MGP_LPJ_G0019947.1 mouse_genomes_project 12 104716286 104762926 - MGP_LPJ_P0035664 Prima1 protein_coding protein_coding MGP_LPJ_T0035665.1 MGP_LPJ_G0019947.1 mouse_genomes_project 12 104716646 104762904 - MGP_LPJ_P0035665 Prima1 protein_coding nonsense_mediated_decay MGP_LPJ_T0035666.1 MGP_LPJ_G0019947.1 mouse_genomes_project 12 104755085 104756800 - Prima1 protein_coding processed_transcript MGP_LPJ_T0098133.1 MGP_LPJ_G0036414.1 mouse_genomes_project 12 23482359 23482465 + Gm22527 rRNA rRNA MGP_LPJ_T0006424.1 MGP_LPJ_G0005353.1 mouse_genomes_project 12 28399349 28456920 - 2310016D03Rik lincRNA lincRNA MGP_LPJ_T0034751.1 MGP_LPJ_G0019652.1 mouse_genomes_project 12 54651360 54654462 + MGP_LPJ_P0034751 Insm2 protein_coding protein_coding MGP_LPJ_T0035800.1 MGP_LPJ_G0020003.1 mouse_genomes_project 12 110168488 110247373 - MGP_LPJ_P0035800 Ccdc85c protein_coding protein_coding MGP_LPJ_T0011348.1 MGP_LPJ_G0009466.1 mouse_genomes_project 12 76800660 76800942 + Gm24010 misc_RNA misc_RNA MGP_LPJ_T0009810.1 MGP_LPJ_G0007928.1 mouse_genomes_project 12 58488058 58488128 - Gm27284 miRNA miRNA MGP_LPJ_T0009856.1 MGP_LPJ_G0007974.1 mouse_genomes_project 12 111650545 111650615 + Mir127 miRNA miRNA MGP_LPJ_T0035346.1 MGP_LPJ_G0019853.1 mouse_genomes_project 12 85744428 85769308 + MGP_LPJ_P0035346 Dlst protein_coding protein_coding MGP_LPJ_T0036045.1 MGP_LPJ_G0020084.1 mouse_genomes_project 12 119394587 119699622 + Ptprn2 protein_coding processed_transcript MGP_LPJ_T0036046.1 MGP_LPJ_G0020084.1 mouse_genomes_project 12 119394596 120053012 + Ptprn2 protein_coding processed_transcript MGP_LPJ_T0036047.1 MGP_LPJ_G0020084.1 mouse_genomes_project 12 119394596 120211992 + MGP_LPJ_P0036047 Ptprn2 protein_coding nonsense_mediated_decay MGP_LPJ_T0036048.1 MGP_LPJ_G0020084.1 mouse_genomes_project 12 119394637 119774110 + Ptprn2 protein_coding retained_intron MGP_LPJ_T0036049.1 MGP_LPJ_G0020084.1 mouse_genomes_project 12 119394700 120211936 + MGP_LPJ_P0036049 Ptprn2 protein_coding protein_coding MGP_LPJ_T0034980.1 MGP_LPJ_G0019732.1 mouse_genomes_project 12 72836423 72841431 + MGP_LPJ_P0034980 Six6 protein_coding protein_coding MGP_LPJ_T0034557.1 MGP_LPJ_G0019571.1 mouse_genomes_project 12 30035734 30137092 - MGP_LPJ_P0034557 Prkar2b protein_coding protein_coding MGP_LPJ_T0035445.1 MGP_LPJ_G0019885.1 mouse_genomes_project 12 88018589 88046910 - MGP_LPJ_P0035445 Vipas39 protein_coding protein_coding MGP_LPJ_T0035446.1 MGP_LPJ_G0019885.1 mouse_genomes_project 12 88018589 88044868 - MGP_LPJ_P0035446 Vipas39 protein_coding protein_coding MGP_LPJ_T0035447.1 MGP_LPJ_G0019885.1 mouse_genomes_project 12 88018589 88046910 - MGP_LPJ_P0035447 Vipas39 protein_coding protein_coding MGP_LPJ_T0017274.1 MGP_LPJ_G0015155.1 mouse_genomes_project 12 113962822 113963558 + Gm15995 processed_transcript processed_transcript MGP_LPJ_T0006466.1 MGP_LPJ_G0005389.1 mouse_genomes_project 12 100896616 100898540 - 1700064M15Rik lincRNA lincRNA MGP_LPJ_T0000903.1 MGP_LPJ_G0000832.1 mouse_genomes_project 12 111733042 111741737 + TEC TEC MGP_LPJ_T0097980.1 MGP_LPJ_G0036261.1 mouse_genomes_project 12 6609815 6610369 + pseudogene pseudogene MGP_LPJ_T0098985.1 MGP_LPJ_G0037248.1 mouse_genomes_project 12 65045221 65045324 + Gm25599 snRNA snRNA MGP_LPJ_T0035179.1 MGP_LPJ_G0019812.1 mouse_genomes_project 12 83044058 83512557 + MGP_LPJ_P0035179 Rgs6 protein_coding protein_coding MGP_LPJ_T0035180.1 MGP_LPJ_G0019812.1 mouse_genomes_project 12 83075735 83627263 + MGP_LPJ_P0035180 Rgs6 protein_coding protein_coding MGP_LPJ_T0035181.1 MGP_LPJ_G0019812.1 mouse_genomes_project 12 83076024 83560591 + MGP_LPJ_P0035181 Rgs6 protein_coding protein_coding MGP_LPJ_T0035182.1 MGP_LPJ_G0019812.1 mouse_genomes_project 12 83076044 83627532 + MGP_LPJ_P0035182 Rgs6 protein_coding protein_coding MGP_LPJ_T0035183.1 MGP_LPJ_G0019812.1 mouse_genomes_project 12 83076137 83628104 + MGP_LPJ_P0035183 Rgs6 protein_coding protein_coding MGP_LPJ_T0035184.1 MGP_LPJ_G0019812.1 mouse_genomes_project 12 83076598 83628660 + MGP_LPJ_P0035184 Rgs6 protein_coding protein_coding MGP_LPJ_T0035185.1 MGP_LPJ_G0019812.1 mouse_genomes_project 12 83076598 83631348 + MGP_LPJ_P0035185 Rgs6 protein_coding protein_coding MGP_LPJ_T0035186.1 MGP_LPJ_G0019812.1 mouse_genomes_project 12 83076671 83627638 + MGP_LPJ_P0035186 Rgs6 protein_coding nonsense_mediated_decay MGP_LPJ_T0035187.1 MGP_LPJ_G0019812.1 mouse_genomes_project 12 83076686 83530979 + MGP_LPJ_P0035187 Rgs6 protein_coding protein_coding MGP_LPJ_T0035188.1 MGP_LPJ_G0019812.1 mouse_genomes_project 12 83076734 83516335 + MGP_LPJ_P0035188 Rgs6 protein_coding protein_coding MGP_LPJ_T0035189.1 MGP_LPJ_G0019812.1 mouse_genomes_project 12 83076753 83627385 + MGP_LPJ_P0035189 Rgs6 protein_coding protein_coding MGP_LPJ_T0035190.1 MGP_LPJ_G0019812.1 mouse_genomes_project 12 83076948 83516273 + MGP_LPJ_P0035190 Rgs6 protein_coding protein_coding MGP_LPJ_T0035191.1 MGP_LPJ_G0019812.1 mouse_genomes_project 12 83077124 83078092 + Rgs6 protein_coding retained_intron MGP_LPJ_T0035192.1 MGP_LPJ_G0019812.1 mouse_genomes_project 12 83109431 83607188 + MGP_LPJ_P0035192 Rgs6 protein_coding protein_coding MGP_LPJ_T0035193.1 MGP_LPJ_G0019812.1 mouse_genomes_project 12 83109431 83627263 + MGP_LPJ_P0035193 Rgs6 protein_coding protein_coding MGP_LPJ_T0035194.1 MGP_LPJ_G0019812.1 mouse_genomes_project 12 83109431 83603143 + MGP_LPJ_P0035194 Rgs6 protein_coding protein_coding MGP_LPJ_T0035195.1 MGP_LPJ_G0019812.1 mouse_genomes_project 12 83109431 83607065 + MGP_LPJ_P0035195 Rgs6 protein_coding protein_coding MGP_LPJ_T0035196.1 MGP_LPJ_G0019812.1 mouse_genomes_project 12 83109431 83627263 + MGP_LPJ_P0035196 Rgs6 protein_coding protein_coding MGP_LPJ_T0035197.1 MGP_LPJ_G0019812.1 mouse_genomes_project 12 83109431 83607065 + MGP_LPJ_P0035197 Rgs6 protein_coding protein_coding MGP_LPJ_T0035198.1 MGP_LPJ_G0019812.1 mouse_genomes_project 12 83511954 83513085 + Rgs6 protein_coding retained_intron MGP_LPJ_T0035199.1 MGP_LPJ_G0019812.1 mouse_genomes_project 12 83575088 83627499 + MGP_LPJ_P0035199 Rgs6 protein_coding protein_coding MGP_LPJ_T0035200.1 MGP_LPJ_G0019812.1 mouse_genomes_project 12 83585644 83607020 + Rgs6 protein_coding retained_intron MGP_LPJ_T0035716.1 MGP_LPJ_G0019966.1 mouse_genomes_project 12 105586014 105606132 - MGP_LPJ_P0035716 protein_coding protein_coding MGP_LPJ_T0035717.1 MGP_LPJ_G0019966.1 mouse_genomes_project 12 105600784 105606235 - MGP_LPJ_P0035717 protein_coding protein_coding MGP_LPJ_T0012786.1 MGP_LPJ_G0010877.1 mouse_genomes_project 12 11140803 11141779 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100195.1 MGP_LPJ_G0038458.1 mouse_genomes_project 12 15109002 15109138 + Gm22748 snoRNA snoRNA MGP_LPJ_T0012834.1 MGP_LPJ_G0010925.1 mouse_genomes_project 12 105830751 105831838 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098141.1 MGP_LPJ_G0036422.1 mouse_genomes_project 12 68218368 68218486 + n-R5s61 rRNA rRNA MGP_LPJ_T0034707.1 MGP_LPJ_G0019631.1 mouse_genomes_project 12 50888237 50893458 - MGP_LPJ_P0034707 Gpr33 protein_coding protein_coding MGP_LPJ_T0035578.1 MGP_LPJ_G0019919.1 mouse_genomes_project 12 101503972 101514341 + MGP_LPJ_P0035578 Calm1 protein_coding protein_coding MGP_LPJ_T0035579.1 MGP_LPJ_G0019919.1 mouse_genomes_project 12 101504066 101508475 + Calm1 protein_coding retained_intron MGP_LPJ_T0035580.1 MGP_LPJ_G0019919.1 mouse_genomes_project 12 101504681 101514341 + MGP_LPJ_P0035580 Calm1 protein_coding protein_coding MGP_LPJ_T0035581.1 MGP_LPJ_G0019919.1 mouse_genomes_project 12 101509940 101511033 + Calm1 protein_coding retained_intron MGP_LPJ_T0036050.1 MGP_LPJ_G0020085.1 mouse_genomes_project 12 120472210 120726151 + MGP_LPJ_P0036050 Rapgef5 protein_coding protein_coding MGP_LPJ_T0036051.1 MGP_LPJ_G0020085.1 mouse_genomes_project 12 120493038 120728838 + MGP_LPJ_P0036051 Rapgef5 protein_coding unknown_likely_coding MGP_LPJ_T0035704.1 MGP_LPJ_G0019960.1 mouse_genomes_project 12 105249566 105256179 - MGP_LPJ_P0035704 Serpina1f protein_coding protein_coding MGP_LPJ_T0035705.1 MGP_LPJ_G0019960.1 mouse_genomes_project 12 105251156 105257049 - MGP_LPJ_P0035705 Serpina1f protein_coding protein_coding MGP_LPJ_T0035706.1 MGP_LPJ_G0019960.1 mouse_genomes_project 12 105251159 105256229 - MGP_LPJ_P0035706 Serpina1f protein_coding protein_coding MGP_LPJ_T0035243.1 MGP_LPJ_G0019820.1 mouse_genomes_project 12 84491145 84493491 + MGP_LPJ_P0035243 2410016O06Rik protein_coding protein_coding MGP_LPJ_T0006476.1 MGP_LPJ_G0005398.1 mouse_genomes_project 12 108407066 108423232 + Gm17033 lincRNA lincRNA MGP_LPJ_T0012804.1 MGP_LPJ_G0010895.1 mouse_genomes_project 12 60837918 60838447 + processed_pseudogene processed_pseudogene MGP_LPJ_T0035128.1 MGP_LPJ_G0019794.1 mouse_genomes_project 12 81066854 81073350 - MGP_LPJ_P0035128 Ccdc177 protein_coding protein_coding MGP_LPJ_T0034209.1 MGP_LPJ_G0019458.1 mouse_genomes_project 12 59515 125670 - MGP_LPJ_P0034209 Rab10 protein_coding protein_coding MGP_LPJ_T0035276.1 MGP_LPJ_G0019833.1 mouse_genomes_project 12 84895785 84925262 + MGP_LPJ_P0035276 Zfp410 protein_coding protein_coding MGP_LPJ_T0034483.1 MGP_LPJ_G0019548.1 mouse_genomes_project 12 26599489 26606466 + MGP_LPJ_P0034483 Adi1 protein_coding protein_coding MGP_LPJ_T0034484.1 MGP_LPJ_G0019548.1 mouse_genomes_project 12 26599742 26606020 + MGP_LPJ_P0034484 Adi1 protein_coding protein_coding MGP_LPJ_T0034485.1 MGP_LPJ_G0019548.1 mouse_genomes_project 12 26602078 26604021 + Adi1 protein_coding processed_transcript MGP_LPJ_T0035998.1 MGP_LPJ_G0020071.1 mouse_genomes_project 12 115384852 115401407 + MGP_LPJ_P0035998 Tex22 protein_coding protein_coding MGP_LPJ_T0035999.1 MGP_LPJ_G0020071.1 mouse_genomes_project 12 115384852 115401405 + MGP_LPJ_P0035999 Tex22 protein_coding protein_coding MGP_LPJ_T0036000.1 MGP_LPJ_G0020071.1 mouse_genomes_project 12 115385106 115401408 + MGP_LPJ_P0036000 Tex22 protein_coding protein_coding MGP_LPJ_T0036001.1 MGP_LPJ_G0020071.1 mouse_genomes_project 12 115385128 115385722 + MGP_LPJ_P0036001 Tex22 protein_coding protein_coding MGP_LPJ_T0034736.1 MGP_LPJ_G0019644.1 mouse_genomes_project 12 54103146 54145861 + MGP_LPJ_P0034736 protein_coding protein_coding MGP_LPJ_T0034737.1 MGP_LPJ_G0019644.1 mouse_genomes_project 12 54103351 54145703 + MGP_LPJ_P0034737 protein_coding unknown_likely_coding MGP_LPJ_T0034738.1 MGP_LPJ_G0019644.1 mouse_genomes_project 12 54103434 54145401 + MGP_LPJ_P0034738 protein_coding protein_coding MGP_LPJ_T0035309.1 MGP_LPJ_G0019842.1 mouse_genomes_project 12 85204686 85219714 - MGP_LPJ_P0035309 Abcd4 protein_coding protein_coding MGP_LPJ_T0034393.1 MGP_LPJ_G0019516.1 mouse_genomes_project 12 14419381 14515249 + MGP_LPJ_P0034393 Rock2 protein_coding protein_coding MGP_LPJ_T0035980.1 MGP_LPJ_G0020059.1 mouse_genomes_project 12 115024784 115049184 + MGP_LPJ_P0035980 Cep170b protein_coding protein_coding MGP_LPJ_T0035981.1 MGP_LPJ_G0020059.1 mouse_genomes_project 12 115024804 115049180 + MGP_LPJ_P0035981 Cep170b protein_coding protein_coding MGP_LPJ_T0035982.1 MGP_LPJ_G0020059.1 mouse_genomes_project 12 115024804 115049180 + MGP_LPJ_P0035982 Cep170b protein_coding protein_coding MGP_LPJ_T0034481.1 MGP_LPJ_G0019546.1 mouse_genomes_project 12 26553683 26558797 - MGP_LPJ_P0034481 Rps7 protein_coding protein_coding MGP_LPJ_T0009853.1 MGP_LPJ_G0007971.1 mouse_genomes_project 12 111644354 111644443 + Mir3070b miRNA miRNA MGP_LPJ_T0011337.1 MGP_LPJ_G0009455.1 mouse_genomes_project 12 15221991 15222829 - Gm25925 misc_RNA misc_RNA MGP_LPJ_T0034341.1 MGP_LPJ_G0019492.1 mouse_genomes_project 12 6054238 6071543 + MGP_LPJ_P0034341 Laptm4a protein_coding protein_coding MGP_LPJ_T0035047.1 MGP_LPJ_G0019757.1 mouse_genomes_project 12 76431293 76442926 - MGP_LPJ_P0035047 Zbtb25 protein_coding protein_coding MGP_LPJ_T0035048.1 MGP_LPJ_G0019757.1 mouse_genomes_project 12 76433462 76455997 - MGP_LPJ_P0035048 Zbtb25 protein_coding protein_coding MGP_LPJ_T0035049.1 MGP_LPJ_G0019757.1 mouse_genomes_project 12 76433506 76455532 - MGP_LPJ_P0035049 Zbtb25 protein_coding protein_coding MGP_LPJ_T0035050.1 MGP_LPJ_G0019757.1 mouse_genomes_project 12 76433507 76456135 - MGP_LPJ_P0035050 Zbtb25 protein_coding protein_coding MGP_LPJ_T0035051.1 MGP_LPJ_G0019757.1 mouse_genomes_project 12 76434588 76455926 - MGP_LPJ_P0035051 Zbtb25 protein_coding protein_coding MGP_LPJ_T0035052.1 MGP_LPJ_G0019757.1 mouse_genomes_project 12 76434705 76455997 - MGP_LPJ_P0035052 Zbtb25 protein_coding protein_coding MGP_LPJ_T0100194.1 MGP_LPJ_G0038457.1 mouse_genomes_project 12 14465237 14465359 + Gm22303 snoRNA snoRNA MGP_LPJ_T0000267.1 MGP_LPJ_G0000205.1 mouse_genomes_project 12 116120202 116201250 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0034733.1 MGP_LPJ_G0019643.1 mouse_genomes_project 12 54066691 54102995 - MGP_LPJ_P0034733 2700097O09Rik protein_coding protein_coding MGP_LPJ_T0034734.1 MGP_LPJ_G0019643.1 mouse_genomes_project 12 54066706 54075124 - 2700097O09Rik protein_coding retained_intron MGP_LPJ_T0034735.1 MGP_LPJ_G0019643.1 mouse_genomes_project 12 54074776 54102993 - 2700097O09Rik protein_coding retained_intron MGP_LPJ_T0034896.1 MGP_LPJ_G0019704.1 mouse_genomes_project 12 69576596 69651779 + MGP_LPJ_P0034896 Atl1 protein_coding protein_coding MGP_LPJ_T0035895.1 MGP_LPJ_G0020032.1 mouse_genomes_project 12 113483647 113581064 - MGP_LPJ_P0035895 Cdc42bpb protein_coding protein_coding MGP_LPJ_T0035602.1 MGP_LPJ_G0019925.1 mouse_genomes_project 12 102384883 102433827 - MGP_LPJ_P0035602 Smek1 protein_coding protein_coding MGP_LPJ_T0035603.1 MGP_LPJ_G0019925.1 mouse_genomes_project 12 102384883 102433827 - MGP_LPJ_P0035603 Smek1 protein_coding protein_coding MGP_LPJ_T0034784.1 MGP_LPJ_G0019666.1 mouse_genomes_project 12 58189598 58246638 - MGP_LPJ_P0034784 Sec23a protein_coding protein_coding MGP_LPJ_T0034785.1 MGP_LPJ_G0019666.1 mouse_genomes_project 12 58190919 58241856 - MGP_LPJ_P0034785 Sec23a protein_coding protein_coding MGP_LPJ_T0034786.1 MGP_LPJ_G0019666.1 mouse_genomes_project 12 58197732 58202671 - Sec23a protein_coding retained_intron MGP_LPJ_T0034787.1 MGP_LPJ_G0019666.1 mouse_genomes_project 12 58204385 58215345 - Sec23a protein_coding retained_intron MGP_LPJ_T0034788.1 MGP_LPJ_G0019666.1 mouse_genomes_project 12 58241274 58246638 - Sec23a protein_coding retained_intron MGP_LPJ_T0009858.1 MGP_LPJ_G0007976.1 mouse_genomes_project 12 111652457 111652532 + Mir432 miRNA miRNA MGP_LPJ_T0100211.1 MGP_LPJ_G0038474.1 mouse_genomes_project 12 48331035 48331163 - Gm25015 snoRNA snoRNA MGP_LPJ_T0034273.1 MGP_LPJ_G0019468.1 mouse_genomes_project 12 1081064 1101438 - MGP_LPJ_P0034273 Cenpo protein_coding protein_coding MGP_LPJ_T0034274.1 MGP_LPJ_G0019468.1 mouse_genomes_project 12 1082882 1118435 - MGP_LPJ_P0034274 Cenpo protein_coding protein_coding MGP_LPJ_T0034276.1 MGP_LPJ_G0019468.1 mouse_genomes_project 12 1098373 1101398 - Cenpo protein_coding retained_intron MGP_LPJ_T0034277.1 MGP_LPJ_G0019468.1 mouse_genomes_project 12 1099385 1118249 - MGP_LPJ_P0034277 Cenpo protein_coding protein_coding MGP_LPJ_T0034278.1 MGP_LPJ_G0019468.1 mouse_genomes_project 12 1100249 1116473 - MGP_LPJ_P0034278 Cenpo protein_coding protein_coding MGP_LPJ_T0034279.1 MGP_LPJ_G0019468.1 mouse_genomes_project 12 1100583 1118408 - Cenpo protein_coding retained_intron MGP_LPJ_T0101800.1 MGP_LPJ_G0039838.1 mouse_genomes_project 12 47628738 47630956 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0034360.1 MGP_LPJ_G0019501.1 mouse_genomes_project 12 8487912 8513806 - MGP_LPJ_P0034360 Gen1 protein_coding protein_coding MGP_LPJ_T0034702.1 MGP_LPJ_G0019628.1 mouse_genomes_project 12 50589432 50680111 - MGP_LPJ_P0034702 Hectd1 protein_coding protein_coding MGP_LPJ_T0034703.1 MGP_LPJ_G0019628.1 mouse_genomes_project 12 50589432 50680111 - MGP_LPJ_P0034703 Hectd1 protein_coding protein_coding MGP_LPJ_T0035227.1 MGP_LPJ_G0019817.1 mouse_genomes_project 12 84210465 84258252 + MGP_LPJ_P0035227 Psen1 protein_coding protein_coding MGP_LPJ_T0035228.1 MGP_LPJ_G0019817.1 mouse_genomes_project 12 84210825 84259338 + MGP_LPJ_P0035228 Psen1 protein_coding protein_coding MGP_LPJ_T0035010.1 MGP_LPJ_G0019746.1 mouse_genomes_project 12 74935469 75228816 - MGP_LPJ_P0035010 Kcnh5 protein_coding protein_coding MGP_LPJ_T0000896.1 MGP_LPJ_G0000825.1 mouse_genomes_project 12 83590740 83591542 - TEC TEC MGP_LPJ_T0012844.1 MGP_LPJ_G0010935.1 mouse_genomes_project 12 115753760 115754214 - processed_pseudogene processed_pseudogene MGP_LPJ_T0034701.1 MGP_LPJ_G0019627.1 mouse_genomes_project 12 50533440 50584636 + MGP_LPJ_P0034701 Ap4s1 protein_coding protein_coding MGP_LPJ_T0034689.1 MGP_LPJ_G0019621.1 mouse_genomes_project 12 49932286 49938301 - MGP_LPJ_P0034689 Tuba1a protein_coding protein_coding MGP_LPJ_T0012799.1 MGP_LPJ_G0010890.1 mouse_genomes_project 12 56671875 56673457 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100207.1 MGP_LPJ_G0038470.1 mouse_genomes_project 12 39813065 39813197 - Gm25497 snoRNA snoRNA MGP_LPJ_T0098976.1 MGP_LPJ_G0037239.1 mouse_genomes_project 12 53716236 53716400 + Gm22634 snRNA snRNA MGP_LPJ_T0000118.1 MGP_LPJ_G0000090.1 mouse_genomes_project 12 117328577 117329011 - MGP_LPJ_P0000118 Ighv1-23 IG_V_gene IG_V_gene MGP_LPJ_T0000129.1 MGP_LPJ_G0000097.1 mouse_genomes_project 12 118304913 118305214 - MGP_LPJ_P0000129 IG_V_gene IG_V_gene MGP_LPJ_T0000130.1 MGP_LPJ_G0000097.1 mouse_genomes_project 12 118304913 118305361 - MGP_LPJ_P0000130 IG_V_gene IG_V_gene MGP_LPJ_T0009878.1 MGP_LPJ_G0007996.1 mouse_genomes_project 12 111782240 111782361 + Mir1193 miRNA miRNA MGP_LPJ_T0011340.1 MGP_LPJ_G0009458.1 mouse_genomes_project 12 45470430 45470679 - Gm25051 misc_RNA misc_RNA MGP_LPJ_T0006453.1 MGP_LPJ_G0005376.1 mouse_genomes_project 12 81241747 81242765 - 1700052I22Rik lincRNA lincRNA MGP_LPJ_T0035909.1 MGP_LPJ_G0020036.1 mouse_genomes_project 12 113687964 113689177 - MGP_LPJ_P0035909 Gm266 protein_coding protein_coding MGP_LPJ_T0098971.1 MGP_LPJ_G0037234.1 mouse_genomes_project 12 51483171 51483278 + Gm24859 snRNA snRNA MGP_LPJ_T0000293.1 MGP_LPJ_G0000231.1 mouse_genomes_project 12 117522469 117522876 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0098489.1 MGP_LPJ_G0036766.1 mouse_genomes_project 12 85543674 85544645 - Gm17193 sense_intronic sense_intronic MGP_LPJ_T0036032.1 MGP_LPJ_G0020079.1 mouse_genomes_project 12 118937906 118950769 + MGP_LPJ_P0036032 Zfp386 protein_coding protein_coding MGP_LPJ_T0036033.1 MGP_LPJ_G0020079.1 mouse_genomes_project 12 118937946 118945299 + Zfp386 protein_coding retained_intron MGP_LPJ_T0036034.1 MGP_LPJ_G0020079.1 mouse_genomes_project 12 118937958 118953537 + MGP_LPJ_P0036034 Zfp386 protein_coding protein_coding MGP_LPJ_T0036035.1 MGP_LPJ_G0020079.1 mouse_genomes_project 12 118938011 118941808 + Zfp386 protein_coding retained_intron MGP_LPJ_T0017241.1 MGP_LPJ_G0015143.1 mouse_genomes_project 12 44031651 44036170 + Gm9921 processed_transcript processed_transcript MGP_LPJ_T0035480.1 MGP_LPJ_G0019897.1 mouse_genomes_project 12 89553337 90126180 + Nrxn3 protein_coding retained_intron MGP_LPJ_T0035481.1 MGP_LPJ_G0019897.1 mouse_genomes_project 12 89553349 89688777 + Nrxn3 protein_coding retained_intron MGP_LPJ_T0035482.1 MGP_LPJ_G0019897.1 mouse_genomes_project 12 89553447 91265898 + MGP_LPJ_P0035482 Nrxn3 protein_coding nonsense_mediated_decay MGP_LPJ_T0035483.1 MGP_LPJ_G0019897.1 mouse_genomes_project 12 89553570 91265917 + MGP_LPJ_P0035483 Nrxn3 protein_coding nonsense_mediated_decay MGP_LPJ_T0035484.1 MGP_LPJ_G0019897.1 mouse_genomes_project 12 89555496 89629429 + Nrxn3 protein_coding processed_transcript MGP_LPJ_T0035485.1 MGP_LPJ_G0019897.1 mouse_genomes_project 12 89556168 89629295 + Nrxn3 protein_coding processed_transcript MGP_LPJ_T0035486.1 MGP_LPJ_G0019897.1 mouse_genomes_project 12 89628159 89691016 + MGP_LPJ_P0035486 Nrxn3 protein_coding unknown_likely_coding MGP_LPJ_T0035487.1 MGP_LPJ_G0019897.1 mouse_genomes_project 12 89628817 91267955 + MGP_LPJ_P0035487 Nrxn3 protein_coding protein_coding MGP_LPJ_T0035488.1 MGP_LPJ_G0019897.1 mouse_genomes_project 12 89629752 89691139 + Nrxn3 protein_coding processed_transcript MGP_LPJ_T0035489.1 MGP_LPJ_G0019897.1 mouse_genomes_project 12 89798137 90046686 + Nrxn3 protein_coding processed_transcript MGP_LPJ_T0035490.1 MGP_LPJ_G0019897.1 mouse_genomes_project 12 89798146 91266080 + MGP_LPJ_P0035490 Nrxn3 protein_coding protein_coding MGP_LPJ_T0035491.1 MGP_LPJ_G0019897.1 mouse_genomes_project 12 90052471 91265430 + MGP_LPJ_P0035491 Nrxn3 protein_coding protein_coding MGP_LPJ_T0035492.1 MGP_LPJ_G0019897.1 mouse_genomes_project 12 90709793 91266463 + MGP_LPJ_P0035492 Nrxn3 protein_coding protein_coding MGP_LPJ_T0035493.1 MGP_LPJ_G0019897.1 mouse_genomes_project 12 90709793 91265919 + MGP_LPJ_P0035493 Nrxn3 protein_coding protein_coding MGP_LPJ_T0012837.1 MGP_LPJ_G0010928.1 mouse_genomes_project 12 108390419 108391941 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000072.1 MGP_LPJ_G0000058.1 mouse_genomes_project 12 116445692 116446151 - MGP_LPJ_P0000072 Ighv7-2 IG_V_gene IG_V_gene MGP_LPJ_T0000073.1 MGP_LPJ_G0000058.1 mouse_genomes_project 12 116445692 116446151 - MGP_LPJ_P0000073 Ighv7-2 IG_V_gene IG_V_gene MGP_LPJ_T0000310.1 MGP_LPJ_G0000248.1 mouse_genomes_project 12 118854354 118854666 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0012840.1 MGP_LPJ_G0010931.1 mouse_genomes_project 12 109313633 109313922 + processed_pseudogene processed_pseudogene MGP_LPJ_T0034624.1 MGP_LPJ_G0019601.1 mouse_genomes_project 12 37175355 37261823 + MGP_LPJ_P0034624 Etv1 protein_coding protein_coding MGP_LPJ_T0034625.1 MGP_LPJ_G0019601.1 mouse_genomes_project 12 37176057 37263789 + MGP_LPJ_P0034625 Etv1 protein_coding protein_coding MGP_LPJ_T0034626.1 MGP_LPJ_G0019601.1 mouse_genomes_project 12 37176259 37261353 + MGP_LPJ_P0034626 Etv1 protein_coding protein_coding MGP_LPJ_T0034627.1 MGP_LPJ_G0019601.1 mouse_genomes_project 12 37176294 37177789 + MGP_LPJ_P0034627 Etv1 protein_coding protein_coding MGP_LPJ_T0034628.1 MGP_LPJ_G0019601.1 mouse_genomes_project 12 37176324 37231219 + MGP_LPJ_P0034628 Etv1 protein_coding protein_coding MGP_LPJ_T0034629.1 MGP_LPJ_G0019601.1 mouse_genomes_project 12 37176823 37261350 + MGP_LPJ_P0034629 Etv1 protein_coding protein_coding MGP_LPJ_T0034630.1 MGP_LPJ_G0019601.1 mouse_genomes_project 12 37177088 37262873 + Etv1 protein_coding retained_intron MGP_LPJ_T0034631.1 MGP_LPJ_G0019601.1 mouse_genomes_project 12 37177104 37231131 + MGP_LPJ_P0034631 Etv1 protein_coding protein_coding MGP_LPJ_T0034632.1 MGP_LPJ_G0019601.1 mouse_genomes_project 12 37179445 37261750 + MGP_LPJ_P0034632 Etv1 protein_coding protein_coding MGP_LPJ_T0034633.1 MGP_LPJ_G0019601.1 mouse_genomes_project 12 37179456 37261535 + MGP_LPJ_P0034633 Etv1 protein_coding protein_coding MGP_LPJ_T0034634.1 MGP_LPJ_G0019601.1 mouse_genomes_project 12 37179484 37263777 + MGP_LPJ_P0034634 Etv1 protein_coding protein_coding MGP_LPJ_T0034635.1 MGP_LPJ_G0019601.1 mouse_genomes_project 12 37220588 37227177 + MGP_LPJ_P0034635 Etv1 protein_coding protein_coding MGP_LPJ_T0034636.1 MGP_LPJ_G0019601.1 mouse_genomes_project 12 37233358 37261290 + Etv1 protein_coding processed_transcript MGP_LPJ_T0000030.1 MGP_LPJ_G0000023.1 mouse_genomes_project 12 115869102 115869112 - MGP_LPJ_P0000030 Ighd5-3 IG_D_gene IG_D_gene MGP_LPJ_T0006505.1 MGP_LPJ_G0005413.1 mouse_genomes_project 12 111700477 111702488 + Gm26945 lincRNA lincRNA MGP_LPJ_T0035642.1 MGP_LPJ_G0019938.1 mouse_genomes_project 12 104215246 104255998 - MGP_LPJ_P0035642 Gm28051 protein_coding protein_coding MGP_LPJ_T0012835.1 MGP_LPJ_G0010926.1 mouse_genomes_project 12 108298086 108298432 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009805.1 MGP_LPJ_G0007923.1 mouse_genomes_project 12 35356134 35356235 - Gm44326 miRNA miRNA MGP_LPJ_T0098992.1 MGP_LPJ_G0037255.1 mouse_genomes_project 12 77540131 77540230 + Gm24775 snRNA snRNA MGP_LPJ_T0100205.1 MGP_LPJ_G0038468.1 mouse_genomes_project 12 37835421 37835548 + Gm24069 snoRNA snoRNA MGP_LPJ_T0012851.1 MGP_LPJ_G0010942.1 mouse_genomes_project 12 118406911 118408060 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009835.1 MGP_LPJ_G0007953.1 mouse_genomes_project 12 103018585 103018695 + Gm24542 miRNA miRNA MGP_LPJ_T0100199.1 MGP_LPJ_G0038462.1 mouse_genomes_project 12 26240710 26240842 + Gm25564 snoRNA snoRNA MGP_LPJ_T0012829.1 MGP_LPJ_G0010920.1 mouse_genomes_project 12 102575643 102576436 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098990.1 MGP_LPJ_G0037253.1 mouse_genomes_project 12 70424262 70424363 + Gm24474 snRNA snRNA MGP_LPJ_T0034294.1 MGP_LPJ_G0019480.1 mouse_genomes_project 12 1783082 1794988 - Mfsd2b protein_coding retained_intron MGP_LPJ_T0034295.1 MGP_LPJ_G0019480.1 mouse_genomes_project 12 1783082 1794991 - MGP_LPJ_P0034295 Mfsd2b protein_coding nonsense_mediated_decay MGP_LPJ_T0034296.1 MGP_LPJ_G0019480.1 mouse_genomes_project 12 1783714 1794978 - Mfsd2b protein_coding retained_intron MGP_LPJ_T0034297.1 MGP_LPJ_G0019480.1 mouse_genomes_project 12 1783714 1794991 - MGP_LPJ_P0034297 Mfsd2b protein_coding protein_coding MGP_LPJ_T0034298.1 MGP_LPJ_G0019480.1 mouse_genomes_project 12 1783714 1794991 - MGP_LPJ_P0034298 Mfsd2b protein_coding protein_coding MGP_LPJ_T0034299.1 MGP_LPJ_G0019480.1 mouse_genomes_project 12 1784207 1794992 - Mfsd2b protein_coding retained_intron MGP_LPJ_T0034300.1 MGP_LPJ_G0019480.1 mouse_genomes_project 12 1787868 1789894 - Mfsd2b protein_coding retained_intron MGP_LPJ_T0034301.1 MGP_LPJ_G0019480.1 mouse_genomes_project 12 1789580 1794992 - MGP_LPJ_P0034301 Mfsd2b protein_coding nonsense_mediated_decay MGP_LPJ_T0098143.1 MGP_LPJ_G0036424.1 mouse_genomes_project 12 83041124 83041227 - n-R5s63 rRNA rRNA MGP_LPJ_T0035889.1 MGP_LPJ_G0020030.1 mouse_genomes_project 12 113337343 113411313 + MGP_LPJ_P0035889 Traf3 protein_coding protein_coding MGP_LPJ_T0035890.1 MGP_LPJ_G0020030.1 mouse_genomes_project 12 113392049 113439278 + MGP_LPJ_P0035890 Traf3 protein_coding protein_coding MGP_LPJ_T0035891.1 MGP_LPJ_G0020030.1 mouse_genomes_project 12 113392049 113439274 + MGP_LPJ_P0035891 Traf3 protein_coding protein_coding MGP_LPJ_T0035892.1 MGP_LPJ_G0020030.1 mouse_genomes_project 12 113409797 113439283 + MGP_LPJ_P0035892 Traf3 protein_coding protein_coding MGP_LPJ_T0035893.1 MGP_LPJ_G0020030.1 mouse_genomes_project 12 113420629 113434690 + Traf3 protein_coding retained_intron MGP_LPJ_T0034282.1 MGP_LPJ_G0019471.1 mouse_genomes_project 12 1506587 1506689 - MGP_LPJ_P0034282 Gm3625 protein_coding protein_coding MGP_LPJ_T0100214.1 MGP_LPJ_G0038477.1 mouse_genomes_project 12 55632036 55632168 + Gm25760 snoRNA snoRNA MGP_LPJ_T0000294.1 MGP_LPJ_G0000232.1 mouse_genomes_project 12 117522469 117522882 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0006441.1 MGP_LPJ_G0005368.1 mouse_genomes_project 12 74255294 74267302 + lincRNA lincRNA MGP_LPJ_T0006442.1 MGP_LPJ_G0005368.1 mouse_genomes_project 12 74255302 74267316 + lincRNA lincRNA MGP_LPJ_T0006443.1 MGP_LPJ_G0005368.1 mouse_genomes_project 12 74259748 74267316 + lincRNA lincRNA MGP_LPJ_T0034645.1 MGP_LPJ_G0019605.1 mouse_genomes_project 12 38598148 38619746 - MGP_LPJ_P0034645 Ifrd1 protein_coding protein_coding MGP_LPJ_T0034646.1 MGP_LPJ_G0019605.1 mouse_genomes_project 12 38599712 38603632 - MGP_LPJ_P0034646 Ifrd1 protein_coding protein_coding MGP_LPJ_T0034647.1 MGP_LPJ_G0019605.1 mouse_genomes_project 12 38599901 38601224 - Ifrd1 protein_coding retained_intron MGP_LPJ_T0034648.1 MGP_LPJ_G0019605.1 mouse_genomes_project 12 38600500 38619519 - MGP_LPJ_P0034648 Ifrd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0034649.1 MGP_LPJ_G0019605.1 mouse_genomes_project 12 38610549 38646708 - MGP_LPJ_P0034649 Ifrd1 protein_coding protein_coding MGP_LPJ_T0034650.1 MGP_LPJ_G0019605.1 mouse_genomes_project 12 38610606 38614083 - MGP_LPJ_P0034650 Ifrd1 protein_coding protein_coding MGP_LPJ_T0034651.1 MGP_LPJ_G0019605.1 mouse_genomes_project 12 38610663 38647115 - MGP_LPJ_P0034651 Ifrd1 protein_coding protein_coding MGP_LPJ_T0034652.1 MGP_LPJ_G0019605.1 mouse_genomes_project 12 38611931 38619742 - Ifrd1 protein_coding retained_intron MGP_LPJ_T0034653.1 MGP_LPJ_G0019605.1 mouse_genomes_project 12 38612758 38647133 - MGP_LPJ_P0034653 Ifrd1 protein_coding protein_coding MGP_LPJ_T0034654.1 MGP_LPJ_G0019605.1 mouse_genomes_project 12 38613727 38619706 - MGP_LPJ_P0034654 Ifrd1 protein_coding protein_coding MGP_LPJ_T0034961.1 MGP_LPJ_G0019726.1 mouse_genomes_project 12 72284836 72359720 + MGP_LPJ_P0034961 Lrrc9 protein_coding protein_coding MGP_LPJ_T0034962.1 MGP_LPJ_G0019726.1 mouse_genomes_project 12 72284903 72345709 + MGP_LPJ_P0034962 Lrrc9 protein_coding protein_coding MGP_LPJ_T0034963.1 MGP_LPJ_G0019726.1 mouse_genomes_project 12 72284919 72312297 + Lrrc9 protein_coding retained_intron MGP_LPJ_T0034964.1 MGP_LPJ_G0019726.1 mouse_genomes_project 12 72285005 72363489 + Lrrc9 protein_coding processed_transcript MGP_LPJ_T0034965.1 MGP_LPJ_G0019726.1 mouse_genomes_project 12 72285212 72298826 + Lrrc9 protein_coding retained_intron MGP_LPJ_T0034966.1 MGP_LPJ_G0019726.1 mouse_genomes_project 12 72285219 72320591 + Lrrc9 protein_coding retained_intron MGP_LPJ_T0034967.1 MGP_LPJ_G0019726.1 mouse_genomes_project 12 72292216 72361538 + MGP_LPJ_P0034967 Lrrc9 protein_coding unknown_likely_coding MGP_LPJ_T0034968.1 MGP_LPJ_G0019726.1 mouse_genomes_project 12 72322454 72324042 + Lrrc9 protein_coding retained_intron MGP_LPJ_T0035016.1 MGP_LPJ_G0019748.1 mouse_genomes_project 12 75438924 75443984 - MGP_LPJ_P0035016 Gphb5 protein_coding protein_coding MGP_LPJ_T0000299.1 MGP_LPJ_G0000237.1 mouse_genomes_project 12 117674829 117675263 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0006456.1 MGP_LPJ_G0005379.1 mouse_genomes_project 12 86650715 86667736 - Gm26531 lincRNA lincRNA MGP_LPJ_T0000266.1 MGP_LPJ_G0000204.1 mouse_genomes_project 12 116116069 116116495 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0034829.1 MGP_LPJ_G0019677.1 mouse_genomes_project 12 64439130 64462228 - MGP_LPJ_P0034829 Klhl28 protein_coding protein_coding MGP_LPJ_T0000060.1 MGP_LPJ_G0000048.1 mouse_genomes_project 12 116249425 116250012 - MGP_LPJ_P0000060 IG_V_gene IG_V_gene MGP_LPJ_T0098149.1 MGP_LPJ_G0036430.1 mouse_genomes_project 12 120536080 120536186 + Gm24741 rRNA rRNA MGP_LPJ_T0009908.1 MGP_LPJ_G0008026.1 mouse_genomes_project 12 111810280 111810361 + Mir410 miRNA miRNA MGP_LPJ_T0034486.1 MGP_LPJ_G0019549.1 mouse_genomes_project 12 26616586 26681498 - MGP_LPJ_P0034486 Trappc12 protein_coding protein_coding MGP_LPJ_T0034487.1 MGP_LPJ_G0019549.1 mouse_genomes_project 12 26616586 26681439 - MGP_LPJ_P0034487 Trappc12 protein_coding protein_coding MGP_LPJ_T0034488.1 MGP_LPJ_G0019549.1 mouse_genomes_project 12 26635734 26681498 - MGP_LPJ_P0034488 Trappc12 protein_coding protein_coding MGP_LPJ_T0034860.1 MGP_LPJ_G0019689.1 mouse_genomes_project 12 68806368 68808982 + MGP_LPJ_P0034860 Mgat2 protein_coding protein_coding MGP_LPJ_T0017233.1 MGP_LPJ_G0015140.1 mouse_genomes_project 12 18903393 18907199 - Gm20535 processed_transcript processed_transcript MGP_LPJ_T0000031.1 MGP_LPJ_G0000024.1 mouse_genomes_project 12 115944001 115944018 - MGP_LPJ_P0000031 IG_D_gene IG_D_gene MGP_LPJ_T0000887.1 MGP_LPJ_G0000816.1 mouse_genomes_project 12 8462142 8462891 - TEC TEC MGP_LPJ_T0034936.1 MGP_LPJ_G0019717.1 mouse_genomes_project 12 70888570 70903923 - MGP_LPJ_P0034936 Timm9 protein_coding protein_coding MGP_LPJ_T0017250.1 MGP_LPJ_G0015150.1 mouse_genomes_project 12 101492515 101498081 + Gm10433 processed_transcript processed_transcript MGP_LPJ_T0017251.1 MGP_LPJ_G0015150.1 mouse_genomes_project 12 101493320 101497286 + Gm10433 processed_transcript processed_transcript MGP_LPJ_T0098983.1 MGP_LPJ_G0037246.1 mouse_genomes_project 12 61320132 61320236 + Gm24750 snRNA snRNA MGP_LPJ_T0009892.1 MGP_LPJ_G0008010.1 mouse_genomes_project 12 111794696 111794770 + Mir539 miRNA miRNA MGP_LPJ_T0035201.1 MGP_LPJ_G0019813.1 mouse_genomes_project 12 83689217 83845817 - MGP_LPJ_P0035201 Dpf3 protein_coding protein_coding MGP_LPJ_T0035202.1 MGP_LPJ_G0019813.1 mouse_genomes_project 12 83689223 83990800 - MGP_LPJ_P0035202 Dpf3 protein_coding protein_coding MGP_LPJ_T0035203.1 MGP_LPJ_G0019813.1 mouse_genomes_project 12 83741719 83784144 - MGP_LPJ_P0035203 Dpf3 protein_coding protein_coding MGP_LPJ_T0035204.1 MGP_LPJ_G0019813.1 mouse_genomes_project 12 83750402 83990792 - MGP_LPJ_P0035204 Dpf3 protein_coding protein_coding MGP_LPJ_T0035205.1 MGP_LPJ_G0019813.1 mouse_genomes_project 12 83750519 83939908 - MGP_LPJ_P0035205 Dpf3 protein_coding protein_coding MGP_LPJ_T0035206.1 MGP_LPJ_G0019813.1 mouse_genomes_project 12 83750629 83990792 - MGP_LPJ_P0035206 Dpf3 protein_coding protein_coding MGP_LPJ_T0100206.1 MGP_LPJ_G0038469.1 mouse_genomes_project 12 37980648 37980780 + Gm24434 snoRNA snoRNA MGP_LPJ_T0006507.1 MGP_LPJ_G0005415.1 mouse_genomes_project 12 111796331 111816909 + Mirg lincRNA lincRNA MGP_LPJ_T0006508.1 MGP_LPJ_G0005415.1 mouse_genomes_project 12 111796332 111797409 + Mirg lincRNA lincRNA MGP_LPJ_T0006509.1 MGP_LPJ_G0005415.1 mouse_genomes_project 12 111796843 111816909 + Mirg lincRNA lincRNA MGP_LPJ_T0006510.1 MGP_LPJ_G0005415.1 mouse_genomes_project 12 111797526 111816911 + Mirg lincRNA lincRNA MGP_LPJ_T0006511.1 MGP_LPJ_G0005415.1 mouse_genomes_project 12 111801548 111810299 + Mirg lincRNA lincRNA MGP_LPJ_T0006512.1 MGP_LPJ_G0005415.1 mouse_genomes_project 12 111801548 111816909 + Mirg lincRNA lincRNA MGP_LPJ_T0006513.1 MGP_LPJ_G0005415.1 mouse_genomes_project 12 111801552 111815634 + Mirg lincRNA lincRNA MGP_LPJ_T0006514.1 MGP_LPJ_G0005415.1 mouse_genomes_project 12 111804267 111806627 + Mirg lincRNA lincRNA MGP_LPJ_T0006515.1 MGP_LPJ_G0005415.1 mouse_genomes_project 12 111804345 111808069 + Mirg lincRNA lincRNA MGP_LPJ_T0006516.1 MGP_LPJ_G0005415.1 mouse_genomes_project 12 111810366 111816909 + Mirg lincRNA lincRNA MGP_LPJ_T0006517.1 MGP_LPJ_G0005415.1 mouse_genomes_project 12 111815353 111816906 + Mirg lincRNA lincRNA MGP_LPJ_T0006518.1 MGP_LPJ_G0005415.1 mouse_genomes_project 12 111815414 111816909 + Mirg lincRNA lincRNA MGP_LPJ_T0098979.1 MGP_LPJ_G0037242.1 mouse_genomes_project 12 54016599 54016702 + Gm24296 snRNA snRNA MGP_LPJ_T0000305.1 MGP_LPJ_G0000243.1 mouse_genomes_project 12 118304920 118443093 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0034885.1 MGP_LPJ_G0019702.1 mouse_genomes_project 12 69412361 69459041 - MGP_LPJ_P0034885 Cdkl1 protein_coding unknown_likely_coding MGP_LPJ_T0017244.1 MGP_LPJ_G0015146.1 mouse_genomes_project 12 81911872 81913184 - Gm17191 processed_transcript processed_transcript MGP_LPJ_T0000097.1 MGP_LPJ_G0000075.1 mouse_genomes_project 12 116972884 116973318 - MGP_LPJ_P0000097 Ighv12-3 IG_V_gene IG_V_gene MGP_LPJ_T0035948.1 MGP_LPJ_G0020048.1 mouse_genomes_project 12 114231493 114326332 + MGP_LPJ_P0035948 Tdrd9 protein_coding protein_coding MGP_LPJ_T0035954.1 MGP_LPJ_G0020048.1 mouse_genomes_project 12 114259402 114325828 + MGP_LPJ_P0035954 Tdrd9 protein_coding nonsense_mediated_decay MGP_LPJ_T0035955.1 MGP_LPJ_G0020048.1 mouse_genomes_project 12 114259402 114325828 + MGP_LPJ_P0035955 Tdrd9 protein_coding nonsense_mediated_decay MGP_LPJ_T0035956.1 MGP_LPJ_G0020048.1 mouse_genomes_project 12 114278350 114289708 + Tdrd9 protein_coding retained_intron MGP_LPJ_T0035957.1 MGP_LPJ_G0020048.1 mouse_genomes_project 12 114290151 114304461 + Tdrd9 protein_coding processed_transcript MGP_LPJ_T0035958.1 MGP_LPJ_G0020048.1 mouse_genomes_project 12 114320631 114325098 + Tdrd9 protein_coding retained_intron MGP_LPJ_T0035038.1 MGP_LPJ_G0019753.1 mouse_genomes_project 12 76188286 76247421 - MGP_LPJ_P0035038 Esr2 protein_coding nonsense_mediated_decay MGP_LPJ_T0035039.1 MGP_LPJ_G0019753.1 mouse_genomes_project 12 76188286 76247421 - MGP_LPJ_P0035039 Esr2 protein_coding protein_coding MGP_LPJ_T0035040.1 MGP_LPJ_G0019753.1 mouse_genomes_project 12 76188286 76238262 - MGP_LPJ_P0035040 Esr2 protein_coding protein_coding MGP_LPJ_T0035041.1 MGP_LPJ_G0019753.1 mouse_genomes_project 12 76188306 76247421 - MGP_LPJ_P0035041 Esr2 protein_coding protein_coding MGP_LPJ_T0101814.1 MGP_LPJ_G0039851.1 mouse_genomes_project 12 105790919 105794329 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0000295.1 MGP_LPJ_G0000233.1 mouse_genomes_project 12 117615270 117615698 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0035888.1 MGP_LPJ_G0020029.1 mouse_genomes_project 12 113330553 113356809 - MGP_LPJ_P0035888 4930595D18Rik protein_coding protein_coding MGP_LPJ_T0035803.1 MGP_LPJ_G0020006.1 mouse_genomes_project 12 110360227 110514948 + Eml1 protein_coding retained_intron MGP_LPJ_T0035804.1 MGP_LPJ_G0020006.1 mouse_genomes_project 12 110415398 110546787 + MGP_LPJ_P0035804 Eml1 protein_coding protein_coding MGP_LPJ_T0035805.1 MGP_LPJ_G0020006.1 mouse_genomes_project 12 110415660 110544755 + MGP_LPJ_P0035805 Eml1 protein_coding nonsense_mediated_decay MGP_LPJ_T0035806.1 MGP_LPJ_G0020006.1 mouse_genomes_project 12 110415777 110546796 + MGP_LPJ_P0035806 Eml1 protein_coding protein_coding MGP_LPJ_T0035807.1 MGP_LPJ_G0020006.1 mouse_genomes_project 12 110472274 110546787 + Eml1 protein_coding processed_transcript MGP_LPJ_T0035808.1 MGP_LPJ_G0020006.1 mouse_genomes_project 12 110541189 110544650 + Eml1 protein_coding processed_transcript MGP_LPJ_T0035809.1 MGP_LPJ_G0020006.1 mouse_genomes_project 12 110541247 110546840 + Eml1 protein_coding processed_transcript MGP_LPJ_T0034922.1 MGP_LPJ_G0019713.1 mouse_genomes_project 12 70694132 70720882 + MGP_LPJ_P0034922 Actr10 protein_coding protein_coding MGP_LPJ_T0035364.1 MGP_LPJ_G0019861.1 mouse_genomes_project 12 85988082 86022534 - MGP_LPJ_P0035364 Tmed10 protein_coding protein_coding MGP_LPJ_T0034489.1 MGP_LPJ_G0019550.1 mouse_genomes_project 12 26682872 26804555 + MGP_LPJ_P0034489 Tssc1 protein_coding protein_coding MGP_LPJ_T0006427.1 MGP_LPJ_G0005356.1 mouse_genomes_project 12 30942386 30947419 + Gdap10 lincRNA lincRNA MGP_LPJ_T0009861.1 MGP_LPJ_G0007979.1 mouse_genomes_project 12 111670109 111670205 + Mir341 miRNA miRNA MGP_LPJ_T0000308.1 MGP_LPJ_G0000246.1 mouse_genomes_project 12 118402578 118402872 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0035042.1 MGP_LPJ_G0019754.1 mouse_genomes_project 12 76269279 76315979 - MGP_LPJ_P0035042 Tex21 protein_coding protein_coding MGP_LPJ_T0006474.1 MGP_LPJ_G0005396.1 mouse_genomes_project 12 108161849 108165289 + Gm17032 lincRNA lincRNA MGP_LPJ_T0009848.1 MGP_LPJ_G0007966.1 mouse_genomes_project 12 111641551 111641648 + Mir337 miRNA miRNA MGP_LPJ_T0034755.1 MGP_LPJ_G0019655.1 mouse_genomes_project 12 55401533 55420186 - MGP_LPJ_P0034755 Mbip protein_coding protein_coding MGP_LPJ_T0035085.1 MGP_LPJ_G0019771.1 mouse_genomes_project 12 78403307 78878539 + MGP_LPJ_P0035085 Gphn protein_coding protein_coding MGP_LPJ_T0035086.1 MGP_LPJ_G0019771.1 mouse_genomes_project 12 78403307 78878539 + MGP_LPJ_P0035086 Gphn protein_coding protein_coding MGP_LPJ_T0035087.1 MGP_LPJ_G0019771.1 mouse_genomes_project 12 78403430 78878538 + MGP_LPJ_P0035087 Gphn protein_coding unknown_likely_coding MGP_LPJ_T0006472.1 MGP_LPJ_G0005395.1 mouse_genomes_project 12 107091052 107139302 + lincRNA lincRNA MGP_LPJ_T0006473.1 MGP_LPJ_G0005395.1 mouse_genomes_project 12 107091451 107139300 + lincRNA lincRNA MGP_LPJ_T0098978.1 MGP_LPJ_G0037241.1 mouse_genomes_project 12 53732297 53732461 - Gm25679 snRNA snRNA MGP_LPJ_T0035912.1 MGP_LPJ_G0020038.1 mouse_genomes_project 12 113795738 113883187 + MGP_LPJ_P0035912 Mark3 protein_coding protein_coding MGP_LPJ_T0035913.1 MGP_LPJ_G0020038.1 mouse_genomes_project 12 113795738 113883187 + MGP_LPJ_P0035913 Mark3 protein_coding protein_coding MGP_LPJ_T0035914.1 MGP_LPJ_G0020038.1 mouse_genomes_project 12 113838936 113882575 + MGP_LPJ_P0035914 Mark3 protein_coding unknown_likely_coding MGP_LPJ_T0034312.1 MGP_LPJ_G0019485.1 mouse_genomes_project 12 5288404 5365660 + MGP_LPJ_P0034312 Ldah protein_coding protein_coding MGP_LPJ_T0035723.1 MGP_LPJ_G0019970.1 mouse_genomes_project 12 105726878 105738428 + MGP_LPJ_P0035723 Serpina3b protein_coding protein_coding MGP_LPJ_T0035059.1 MGP_LPJ_G0019763.1 mouse_genomes_project 12 76681535 76821174 - MGP_LPJ_P0035059 Sptb protein_coding protein_coding MGP_LPJ_T0035060.1 MGP_LPJ_G0019763.1 mouse_genomes_project 12 76684281 76685137 - Sptb protein_coding retained_intron MGP_LPJ_T0035061.1 MGP_LPJ_G0019763.1 mouse_genomes_project 12 76698421 76820650 - MGP_LPJ_P0035061 Sptb protein_coding protein_coding MGP_LPJ_T0034518.1 MGP_LPJ_G0019560.1 mouse_genomes_project 12 29209302 29209857 + MGP_LPJ_P0034518 6030469F06Rik protein_coding protein_coding MGP_LPJ_T0000307.1 MGP_LPJ_G0000245.1 mouse_genomes_project 12 118395196 118903864 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0034361.1 MGP_LPJ_G0019502.1 mouse_genomes_project 12 8513904 8571686 + MGP_LPJ_P0034361 Smc6 protein_coding protein_coding MGP_LPJ_T0098135.1 MGP_LPJ_G0036416.1 mouse_genomes_project 12 26980186 26980301 - Gm23342 rRNA rRNA MGP_LPJ_T0034211.1 MGP_LPJ_G0019460.1 mouse_genomes_project 12 241731 338896 + MGP_LPJ_P0034211 Asxl2 protein_coding protein_coding MGP_LPJ_T0034212.1 MGP_LPJ_G0019460.1 mouse_genomes_project 12 241731 338901 + MGP_LPJ_P0034212 Asxl2 protein_coding protein_coding MGP_LPJ_T0034213.1 MGP_LPJ_G0019460.1 mouse_genomes_project 12 241758 328421 + MGP_LPJ_P0034213 Asxl2 protein_coding protein_coding MGP_LPJ_T0034214.1 MGP_LPJ_G0019460.1 mouse_genomes_project 12 241775 334591 + MGP_LPJ_P0034214 Asxl2 protein_coding protein_coding MGP_LPJ_T0034215.1 MGP_LPJ_G0019460.1 mouse_genomes_project 12 241786 272763 + Asxl2 protein_coding retained_intron MGP_LPJ_T0034216.1 MGP_LPJ_G0019460.1 mouse_genomes_project 12 259162 328546 + MGP_LPJ_P0034216 Asxl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0034217.1 MGP_LPJ_G0019460.1 mouse_genomes_project 12 324372 336817 + Asxl2 protein_coding processed_transcript MGP_LPJ_T0000080.1 MGP_LPJ_G0000065.1 mouse_genomes_project 12 116761058 116761523 - MGP_LPJ_P0000080 Ighv7-3 IG_V_gene IG_V_gene MGP_LPJ_T0012787.1 MGP_LPJ_G0010878.1 mouse_genomes_project 12 13199829 13200828 + processed_pseudogene processed_pseudogene MGP_LPJ_T0035176.1 MGP_LPJ_G0019810.1 mouse_genomes_project 12 82604395 82893878 + MGP_LPJ_P0035176 Sipa1l1 protein_coding protein_coding MGP_LPJ_T0035177.1 MGP_LPJ_G0019810.1 mouse_genomes_project 12 82747916 82893878 + MGP_LPJ_P0035177 Sipa1l1 protein_coding protein_coding MGP_LPJ_T0000282.1 MGP_LPJ_G0000220.1 mouse_genomes_project 12 116931705 116932000 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0098144.1 MGP_LPJ_G0036425.1 mouse_genomes_project 12 86392837 86392956 - n-R5s64 rRNA rRNA MGP_LPJ_T0035866.1 MGP_LPJ_G0020022.1 mouse_genomes_project 12 112895838 112970372 + MGP_LPJ_P0035866 protein_coding protein_coding MGP_LPJ_T0035867.1 MGP_LPJ_G0020022.1 mouse_genomes_project 12 112895874 112959685 + MGP_LPJ_P0035867 protein_coding nonsense_mediated_decay MGP_LPJ_T0035868.1 MGP_LPJ_G0020022.1 mouse_genomes_project 12 112895883 112898135 + protein_coding retained_intron MGP_LPJ_T0035869.1 MGP_LPJ_G0020022.1 mouse_genomes_project 12 112895912 112901871 + protein_coding processed_transcript MGP_LPJ_T0035870.1 MGP_LPJ_G0020022.1 mouse_genomes_project 12 112896103 112959849 + MGP_LPJ_P0035870 protein_coding protein_coding MGP_LPJ_T0034563.1 MGP_LPJ_G0019574.1 mouse_genomes_project 12 30935060 30974387 + MGP_LPJ_P0034563 Nampt protein_coding protein_coding MGP_LPJ_T0011335.1 MGP_LPJ_G0009453.1 mouse_genomes_project 12 1288406 1288692 + Gm22343 misc_RNA misc_RNA MGP_LPJ_T0098138.1 MGP_LPJ_G0036419.1 mouse_genomes_project 12 53660994 53661104 - Gm24971 rRNA rRNA MGP_LPJ_T0034834.1 MGP_LPJ_G0019681.1 mouse_genomes_project 12 64577494 64635378 + MGP_LPJ_P0034834 Fancm protein_coding protein_coding MGP_LPJ_T0035852.1 MGP_LPJ_G0020019.1 mouse_genomes_project 12 112743489 112811682 + MGP_LPJ_P0035852 Dync1h1 protein_coding protein_coding MGP_LPJ_T0035853.1 MGP_LPJ_G0020019.1 mouse_genomes_project 12 112783697 112784710 + Dync1h1 protein_coding retained_intron MGP_LPJ_T0035854.1 MGP_LPJ_G0020019.1 mouse_genomes_project 12 112797343 112801349 + MGP_LPJ_P0035854 Dync1h1 protein_coding protein_coding MGP_LPJ_T0035855.1 MGP_LPJ_G0020019.1 mouse_genomes_project 12 112799586 112800525 + Dync1h1 protein_coding retained_intron MGP_LPJ_T0035856.1 MGP_LPJ_G0020019.1 mouse_genomes_project 12 112805375 112806207 + Dync1h1 protein_coding retained_intron MGP_LPJ_T0035857.1 MGP_LPJ_G0020019.1 mouse_genomes_project 12 112805670 112806238 + Dync1h1 protein_coding retained_intron MGP_LPJ_T0035858.1 MGP_LPJ_G0020019.1 mouse_genomes_project 12 112807925 112809611 + Dync1h1 protein_coding retained_intron MGP_LPJ_T0003436.1 MGP_LPJ_G0003155.1 mouse_genomes_project 12 104099961 104105798 + Gm20069 antisense antisense MGP_LPJ_T0006417.1 MGP_LPJ_G0005349.1 mouse_genomes_project 12 13291435 13365645 + Gm5432 lincRNA lincRNA MGP_LPJ_T0017252.1 MGP_LPJ_G0015151.1 mouse_genomes_project 12 103372961 103375055 + Gm20036 processed_transcript processed_transcript MGP_LPJ_T0000296.1 MGP_LPJ_G0000234.1 mouse_genomes_project 12 117622704 117623116 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0036044.1 MGP_LPJ_G0020083.1 mouse_genomes_project 12 119311502 119372075 + MGP_LPJ_P0036044 Ncapg2 protein_coding protein_coding MGP_LPJ_T0035171.1 MGP_LPJ_G0019807.1 mouse_genomes_project 12 82023226 82059539 + MGP_LPJ_P0035171 Ttc9 protein_coding protein_coding MGP_LPJ_T0099005.1 MGP_LPJ_G0037268.1 mouse_genomes_project 12 115536146 115536250 + Gm25622 snRNA snRNA MGP_LPJ_T0000312.1 MGP_LPJ_G0000250.1 mouse_genomes_project 12 118874472 118874905 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0006416.1 MGP_LPJ_G0005348.1 mouse_genomes_project 12 10250655 10255133 + 4930519A11Rik lincRNA lincRNA MGP_LPJ_T0012811.1 MGP_LPJ_G0010902.1 mouse_genomes_project 12 76221498 76221790 - processed_pseudogene processed_pseudogene MGP_LPJ_T0034478.1 MGP_LPJ_G0019544.1 mouse_genomes_project 12 26468832 26500874 - MGP_LPJ_P0034478 Allc protein_coding protein_coding MGP_LPJ_T0034479.1 MGP_LPJ_G0019544.1 mouse_genomes_project 12 26468832 26500882 - MGP_LPJ_P0034479 Allc protein_coding protein_coding MGP_LPJ_T0035735.1 MGP_LPJ_G0019977.1 mouse_genomes_project 12 105959394 106053356 + MGP_LPJ_P0035735 Serpina3m protein_coding protein_coding MGP_LPJ_T0035736.1 MGP_LPJ_G0019977.1 mouse_genomes_project 12 106045566 106053357 + MGP_LPJ_P0035736 Serpina3m protein_coding protein_coding MGP_LPJ_T0034490.1 MGP_LPJ_G0019551.1 mouse_genomes_project 12 27486487 27902250 + MGP_LPJ_P0034490 Myt1l protein_coding protein_coding MGP_LPJ_T0034491.1 MGP_LPJ_G0019551.1 mouse_genomes_project 12 27492947 27902250 + MGP_LPJ_P0034491 Myt1l protein_coding protein_coding MGP_LPJ_T0034492.1 MGP_LPJ_G0019551.1 mouse_genomes_project 12 27700357 27902242 + MGP_LPJ_P0034492 Myt1l protein_coding unknown_likely_coding MGP_LPJ_T0035375.1 MGP_LPJ_G0019867.1 mouse_genomes_project 12 86498185 86507260 - MGP_LPJ_P0035375 0610007P14Rik protein_coding protein_coding MGP_LPJ_T0035376.1 MGP_LPJ_G0019867.1 mouse_genomes_project 12 86498396 86507250 - 0610007P14Rik protein_coding processed_transcript MGP_LPJ_T0035377.1 MGP_LPJ_G0019867.1 mouse_genomes_project 12 86501834 86507282 - 0610007P14Rik protein_coding retained_intron MGP_LPJ_T0035378.1 MGP_LPJ_G0019867.1 mouse_genomes_project 12 86502069 86504988 - 0610007P14Rik protein_coding retained_intron MGP_LPJ_T0035379.1 MGP_LPJ_G0019867.1 mouse_genomes_project 12 86502276 86507288 - MGP_LPJ_P0035379 0610007P14Rik protein_coding protein_coding MGP_LPJ_T0035994.1 MGP_LPJ_G0020068.1 mouse_genomes_project 12 115282653 115285102 + MGP_LPJ_P0035994 Btbd6 protein_coding protein_coding MGP_LPJ_T0035995.1 MGP_LPJ_G0020068.1 mouse_genomes_project 12 115282734 115285102 + MGP_LPJ_P0035995 Btbd6 protein_coding protein_coding MGP_LPJ_T0000022.1 MGP_LPJ_G0000016.1 mouse_genomes_project 12 115669046 115671212 + IG_C_pseudogene IG_C_pseudogene MGP_LPJ_T0034519.1 MGP_LPJ_G0019561.1 mouse_genomes_project 12 29300890 29304457 + Lamb1 protein_coding retained_intron MGP_LPJ_T0034520.1 MGP_LPJ_G0019561.1 mouse_genomes_project 12 29300893 29302390 + MGP_LPJ_P0034520 Lamb1 protein_coding protein_coding MGP_LPJ_T0034521.1 MGP_LPJ_G0019561.1 mouse_genomes_project 12 29300996 29365155 + MGP_LPJ_P0034521 Lamb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0034522.1 MGP_LPJ_G0019561.1 mouse_genomes_project 12 29301017 29365073 + MGP_LPJ_P0034522 Lamb1 protein_coding protein_coding MGP_LPJ_T0034523.1 MGP_LPJ_G0019561.1 mouse_genomes_project 12 29312227 29323554 + Lamb1 protein_coding retained_intron MGP_LPJ_T0034524.1 MGP_LPJ_G0019561.1 mouse_genomes_project 12 29313746 29314511 + Lamb1 protein_coding retained_intron MGP_LPJ_T0034525.1 MGP_LPJ_G0019561.1 mouse_genomes_project 12 29359093 29360027 + Lamb1 protein_coding retained_intron MGP_LPJ_T0034431.1 MGP_LPJ_G0019527.1 mouse_genomes_project 12 18971247 18978460 + MGP_LPJ_P0034431 Iah1 protein_coding protein_coding MGP_LPJ_T0011339.1 MGP_LPJ_G0009457.1 mouse_genomes_project 12 33224432 33224673 - Gm24359 misc_RNA misc_RNA MGP_LPJ_T0012792.1 MGP_LPJ_G0010883.1 mouse_genomes_project 12 50123169 50123604 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009832.1 MGP_LPJ_G0007950.1 mouse_genomes_project 12 92721120 92721185 - Gm22015 miRNA miRNA MGP_LPJ_T0035020.1 MGP_LPJ_G0019751.1 mouse_genomes_project 12 75758718 75779951 - MGP_LPJ_P0035020 Sgpp1 protein_coding protein_coding MGP_LPJ_T0035427.1 MGP_LPJ_G0019877.1 mouse_genomes_project 12 87745386 87750720 - MGP_LPJ_P0035427 Zdhhc22 protein_coding protein_coding MGP_LPJ_T0101807.1 MGP_LPJ_G0039844.1 mouse_genomes_project 12 105331572 105336315 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0000285.1 MGP_LPJ_G0000223.1 mouse_genomes_project 12 117083955 117084416 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0101486.1 MGP_LPJ_G0039629.1 mouse_genomes_project 12 105849883 105854942 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101487.1 MGP_LPJ_G0039629.1 mouse_genomes_project 12 105852130 105855648 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0034617.1 MGP_LPJ_G0019599.1 mouse_genomes_project 12 35606136 35978818 + MGP_LPJ_P0034617 Agmo protein_coding protein_coding MGP_LPJ_T0034618.1 MGP_LPJ_G0019599.1 mouse_genomes_project 12 35606245 35609618 + MGP_LPJ_P0034618 Agmo protein_coding protein_coding MGP_LPJ_T0034619.1 MGP_LPJ_G0019599.1 mouse_genomes_project 12 35606274 35780080 + Agmo protein_coding retained_intron MGP_LPJ_T0034620.1 MGP_LPJ_G0019599.1 mouse_genomes_project 12 35606355 35798128 + MGP_LPJ_P0034620 Agmo protein_coding nonsense_mediated_decay MGP_LPJ_T0034621.1 MGP_LPJ_G0019599.1 mouse_genomes_project 12 35606537 35960070 + MGP_LPJ_P0034621 Agmo protein_coding protein_coding MGP_LPJ_T0000041.1 MGP_LPJ_G0000033.1 mouse_genomes_project 12 115785575 115785628 - MGP_LPJ_P0000041 Ighj1 IG_J_gene IG_J_gene MGP_LPJ_T0000376.1 MGP_LPJ_G0000314.1 mouse_genomes_project 12 58508676 58508745 + mt-Ti Mt_tRNA Mt_tRNA MGP_LPJ_T0003432.1 MGP_LPJ_G0003152.1 mouse_genomes_project 12 92602668 92611584 + Gm16876 antisense antisense MGP_LPJ_T0034969.1 MGP_LPJ_G0019727.1 mouse_genomes_project 12 72383987 72421986 + MGP_LPJ_P0034969 Pcnx4 protein_coding protein_coding MGP_LPJ_T0012839.1 MGP_LPJ_G0010930.1 mouse_genomes_project 12 109091349 109092340 - processed_pseudogene processed_pseudogene MGP_LPJ_T0034789.1 MGP_LPJ_G0019667.1 mouse_genomes_project 12 58248013 58263754 + MGP_LPJ_P0034789 Gemin2 protein_coding protein_coding MGP_LPJ_T0034790.1 MGP_LPJ_G0019667.1 mouse_genomes_project 12 58248074 58263683 + Gemin2 protein_coding retained_intron MGP_LPJ_T0034791.1 MGP_LPJ_G0019667.1 mouse_genomes_project 12 58259951 58263171 + Gemin2 protein_coding retained_intron MGP_LPJ_T0035149.1 MGP_LPJ_G0019802.1 mouse_genomes_project 12 81728370 81730852 - MGP_LPJ_P0035149 Gm4787 protein_coding protein_coding MGP_LPJ_T0098958.1 MGP_LPJ_G0037221.1 mouse_genomes_project 12 1680079 1680184 + Gm23676 snRNA snRNA MGP_LPJ_T0034899.1 MGP_LPJ_G0019707.1 mouse_genomes_project 12 69699063 69799262 - MGP_LPJ_P0034899 Nin protein_coding protein_coding MGP_LPJ_T0034900.1 MGP_LPJ_G0019707.1 mouse_genomes_project 12 69706364 69799283 - MGP_LPJ_P0034900 Nin protein_coding protein_coding MGP_LPJ_T0034901.1 MGP_LPJ_G0019707.1 mouse_genomes_project 12 69706365 69810130 - MGP_LPJ_P0034901 Nin protein_coding protein_coding MGP_LPJ_T0034902.1 MGP_LPJ_G0019707.1 mouse_genomes_project 12 69706385 69810125 - MGP_LPJ_P0034902 Nin protein_coding protein_coding MGP_LPJ_T0098963.1 MGP_LPJ_G0037226.1 mouse_genomes_project 12 10879612 10879719 - Gm24142 snRNA snRNA MGP_LPJ_T0009803.1 MGP_LPJ_G0007921.1 mouse_genomes_project 12 33553370 33553485 + Gm44396 miRNA miRNA MGP_LPJ_T0000890.1 MGP_LPJ_G0000819.1 mouse_genomes_project 12 45816394 45816860 + TEC TEC MGP_LPJ_T0098993.1 MGP_LPJ_G0037256.1 mouse_genomes_project 12 77559504 77559664 + Gm25926 snRNA snRNA MGP_LPJ_T0034861.1 MGP_LPJ_G0019690.1 mouse_genomes_project 12 68811306 68823189 - MGP_LPJ_P0034861 Dnaaf2 protein_coding protein_coding MGP_LPJ_T0009887.1 MGP_LPJ_G0008005.1 mouse_genomes_project 12 111790348 111790416 + Mir376a miRNA miRNA MGP_LPJ_T0012806.1 MGP_LPJ_G0010897.1 mouse_genomes_project 12 62532178 62532475 - processed_pseudogene processed_pseudogene MGP_LPJ_T0034793.1 MGP_LPJ_G0019669.1 mouse_genomes_project 12 58305321 58312413 + MGP_LPJ_P0034793 Pnn protein_coding protein_coding MGP_LPJ_T0034742.1 MGP_LPJ_G0019648.1 mouse_genomes_project 12 54255397 54419979 + MGP_LPJ_P0034742 protein_coding unknown_likely_coding MGP_LPJ_T0034743.1 MGP_LPJ_G0019648.1 mouse_genomes_project 12 54332112 54419900 + MGP_LPJ_P0034743 protein_coding protein_coding MGP_LPJ_T0034744.1 MGP_LPJ_G0019648.1 mouse_genomes_project 12 54332112 54419993 + MGP_LPJ_P0034744 protein_coding protein_coding MGP_LPJ_T0035725.1 MGP_LPJ_G0019972.1 mouse_genomes_project 12 105838027 105840042 + protein_coding processed_transcript MGP_LPJ_T0035726.1 MGP_LPJ_G0019972.1 mouse_genomes_project 12 105838034 105844335 + MGP_LPJ_P0035726 protein_coding protein_coding MGP_LPJ_T0035727.1 MGP_LPJ_G0019972.1 mouse_genomes_project 12 105838041 105841088 + MGP_LPJ_P0035727 protein_coding protein_coding MGP_LPJ_T0035728.1 MGP_LPJ_G0019972.1 mouse_genomes_project 12 105838042 105840106 + MGP_LPJ_P0035728 protein_coding protein_coding MGP_LPJ_T0035983.1 MGP_LPJ_G0020060.1 mouse_genomes_project 12 115064782 115073032 + MGP_LPJ_P0035983 Pld4 protein_coding protein_coding MGP_LPJ_T0034666.1 MGP_LPJ_G0019610.1 mouse_genomes_project 12 39916760 39952245 - MGP_LPJ_P0034666 Lrrn3 protein_coding protein_coding MGP_LPJ_T0034696.1 MGP_LPJ_G0019624.1 mouse_genomes_project 12 50199085 50280083 + MGP_LPJ_P0034696 Scfd1 protein_coding protein_coding MGP_LPJ_T0035103.1 MGP_LPJ_G0019782.1 mouse_genomes_project 12 79389655 79408110 - MGP_LPJ_P0035103 Rdh11 protein_coding protein_coding MGP_LPJ_T0035104.1 MGP_LPJ_G0019782.1 mouse_genomes_project 12 79390869 79406778 - MGP_LPJ_P0035104 Rdh11 protein_coding protein_coding MGP_LPJ_T0035105.1 MGP_LPJ_G0019782.1 mouse_genomes_project 12 79391483 79407610 - MGP_LPJ_P0035105 Rdh11 protein_coding nonsense_mediated_decay MGP_LPJ_T0000145.1 MGP_LPJ_G0000107.1 mouse_genomes_project 12 118874473 118874960 - MGP_LPJ_P0000145 IG_V_gene IG_V_gene MGP_LPJ_T0006423.1 MGP_LPJ_G0005352.1 mouse_genomes_project 12 26381472 26385707 - 1700022F17Rik lincRNA lincRNA MGP_LPJ_T0034637.1 MGP_LPJ_G0019602.1 mouse_genomes_project 12 38396430 38429391 - MGP_LPJ_P0034637 Arl4a protein_coding nonsense_mediated_decay MGP_LPJ_T0034638.1 MGP_LPJ_G0019602.1 mouse_genomes_project 12 38396430 38429400 - MGP_LPJ_P0034638 Arl4a protein_coding nonsense_mediated_decay MGP_LPJ_T0034639.1 MGP_LPJ_G0019602.1 mouse_genomes_project 12 38401652 38406520 - Arl4a protein_coding processed_transcript MGP_LPJ_T0034640.1 MGP_LPJ_G0019602.1 mouse_genomes_project 12 38425314 38429453 - MGP_LPJ_P0034640 Arl4a protein_coding protein_coding MGP_LPJ_T0034641.1 MGP_LPJ_G0019602.1 mouse_genomes_project 12 38427845 38430049 - MGP_LPJ_P0034641 Arl4a protein_coding protein_coding MGP_LPJ_T0000069.1 MGP_LPJ_G0000055.1 mouse_genomes_project 12 116394854 116395376 - MGP_LPJ_P0000069 Ighv5-17 IG_V_gene IG_V_gene MGP_LPJ_T0100209.1 MGP_LPJ_G0038472.1 mouse_genomes_project 12 43681724 43681855 + Gm24731 snoRNA snoRNA MGP_LPJ_T0035247.1 MGP_LPJ_G0019824.1 mouse_genomes_project 12 84561403 84569792 + MGP_LPJ_P0035247 Acot1 protein_coding protein_coding MGP_LPJ_T0012842.1 MGP_LPJ_G0010933.1 mouse_genomes_project 12 110436907 110437648 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006484.1 MGP_LPJ_G0005403.1 mouse_genomes_project 12 109014966 109017862 + Gm16085 lincRNA lincRNA MGP_LPJ_T0100237.1 MGP_LPJ_G0038500.1 mouse_genomes_project 12 111693904 111693979 + Gm23474 snoRNA snoRNA MGP_LPJ_T0006444.1 MGP_LPJ_G0005369.1 mouse_genomes_project 12 76490411 76491312 - 4930426I24Rik lincRNA lincRNA MGP_LPJ_T0035172.1 MGP_LPJ_G0019808.1 mouse_genomes_project 12 82116652 82188111 - MGP_LPJ_P0035172 Map3k9 protein_coding protein_coding MGP_LPJ_T0035173.1 MGP_LPJ_G0019808.1 mouse_genomes_project 12 82125406 82187815 - MGP_LPJ_P0035173 Map3k9 protein_coding unknown_likely_coding MGP_LPJ_T0009828.1 MGP_LPJ_G0007946.1 mouse_genomes_project 12 88224825 88224904 - Mir3068 miRNA miRNA MGP_LPJ_T0035356.1 MGP_LPJ_G0019857.1 mouse_genomes_project 12 85877736 85914531 - MGP_LPJ_P0035356 Mlh3 protein_coding protein_coding MGP_LPJ_T0035357.1 MGP_LPJ_G0019857.1 mouse_genomes_project 12 85877736 85914504 - MGP_LPJ_P0035357 Mlh3 protein_coding protein_coding MGP_LPJ_T0034511.1 MGP_LPJ_G0019557.1 mouse_genomes_project 12 28904958 28932544 - MGP_LPJ_P0034511 Acp1 protein_coding protein_coding MGP_LPJ_T0034512.1 MGP_LPJ_G0019557.1 mouse_genomes_project 12 28904958 28932544 - MGP_LPJ_P0034512 Acp1 protein_coding protein_coding MGP_LPJ_T0034699.1 MGP_LPJ_G0019626.1 mouse_genomes_project 12 50445841 50534419 - MGP_LPJ_P0034699 Strn3 protein_coding protein_coding MGP_LPJ_T0034700.1 MGP_LPJ_G0019626.1 mouse_genomes_project 12 50445841 50534419 - MGP_LPJ_P0034700 Strn3 protein_coding protein_coding MGP_LPJ_T0003422.1 MGP_LPJ_G0003142.1 mouse_genomes_project 12 80999755 81005735 - Plekhd1os antisense antisense MGP_LPJ_T0100252.1 MGP_LPJ_G0038515.1 mouse_genomes_project 12 111745670 111745745 + AF357341 snoRNA snoRNA MGP_LPJ_T0034732.1 MGP_LPJ_G0019642.1 mouse_genomes_project 12 54005685 54006057 - MGP_LPJ_P0034732 Gm20403 protein_coding protein_coding MGP_LPJ_T0101808.1 MGP_LPJ_G0039845.1 mouse_genomes_project 12 105355603 105374235 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0034920.1 MGP_LPJ_G0019712.1 mouse_genomes_project 12 70585637 70663583 + MGP_LPJ_P0034920 Frmd6 protein_coding protein_coding MGP_LPJ_T0034921.1 MGP_LPJ_G0019712.1 mouse_genomes_project 12 70624065 70661408 + MGP_LPJ_P0034921 Frmd6 protein_coding unknown_likely_coding MGP_LPJ_T0034718.1 MGP_LPJ_G0019638.1 mouse_genomes_project 12 53672357 53701048 - MGP_LPJ_P0034718 Eapp protein_coding protein_coding MGP_LPJ_T0034719.1 MGP_LPJ_G0019638.1 mouse_genomes_project 12 53672474 53701091 - MGP_LPJ_P0034719 Eapp protein_coding protein_coding MGP_LPJ_T0034720.1 MGP_LPJ_G0019638.1 mouse_genomes_project 12 53685139 53701070 - MGP_LPJ_P0034720 Eapp protein_coding protein_coding MGP_LPJ_T0034721.1 MGP_LPJ_G0019638.1 mouse_genomes_project 12 53691399 53701089 - MGP_LPJ_P0034721 Eapp protein_coding protein_coding MGP_LPJ_T0006408.1 MGP_LPJ_G0005341.1 mouse_genomes_project 12 2325354 2370535 + 2810032G03Rik lincRNA lincRNA MGP_LPJ_T0006409.1 MGP_LPJ_G0005341.1 mouse_genomes_project 12 2365870 2370861 + 2810032G03Rik lincRNA lincRNA MGP_LPJ_T0035150.1 MGP_LPJ_G0019803.1 mouse_genomes_project 12 81775952 81778456 - MGP_LPJ_P0035150 Adam4 protein_coding protein_coding MGP_LPJ_T0034564.1 MGP_LPJ_G0019575.1 mouse_genomes_project 12 31076738 31101898 + MGP_LPJ_P0034564 Sypl protein_coding protein_coding MGP_LPJ_T0034565.1 MGP_LPJ_G0019575.1 mouse_genomes_project 12 31077031 31099752 + MGP_LPJ_P0034565 Sypl protein_coding protein_coding MGP_LPJ_T0034566.1 MGP_LPJ_G0019575.1 mouse_genomes_project 12 31077094 31097000 + MGP_LPJ_P0034566 Sypl protein_coding nonsense_mediated_decay MGP_LPJ_T0034567.1 MGP_LPJ_G0019575.1 mouse_genomes_project 12 31077406 31090527 + Sypl protein_coding processed_transcript MGP_LPJ_T0034568.1 MGP_LPJ_G0019575.1 mouse_genomes_project 12 31088173 31093190 + Sypl protein_coding retained_intron MGP_LPJ_T0034569.1 MGP_LPJ_G0019575.1 mouse_genomes_project 12 31088253 31092294 + Sypl protein_coding processed_transcript MGP_LPJ_T0017240.1 MGP_LPJ_G0015142.1 mouse_genomes_project 12 31498241 31535711 - Atxn7l1os2 processed_transcript processed_transcript MGP_LPJ_T0003405.1 MGP_LPJ_G0003129.1 mouse_genomes_project 12 38430122 38432051 + Arl4aos antisense antisense MGP_LPJ_T0000092.1 MGP_LPJ_G0000072.1 mouse_genomes_project 12 116908238 116908667 - MGP_LPJ_P0000092 Ighv9-4 IG_V_gene IG_V_gene MGP_LPJ_T0000093.1 MGP_LPJ_G0000072.1 mouse_genomes_project 12 116908238 116908532 - MGP_LPJ_P0000093 Ighv9-4 IG_V_gene IG_V_gene MGP_LPJ_T0035910.1 MGP_LPJ_G0020037.1 mouse_genomes_project 12 113738786 113765458 + MGP_LPJ_P0035910 Eif5 protein_coding protein_coding MGP_LPJ_T0035911.1 MGP_LPJ_G0020037.1 mouse_genomes_project 12 113739395 113763511 + MGP_LPJ_P0035911 Eif5 protein_coding protein_coding MGP_LPJ_T0035343.1 MGP_LPJ_G0019852.1 mouse_genomes_project 12 85718684 85730677 - MGP_LPJ_P0035343 Prox2 protein_coding protein_coding MGP_LPJ_T0035344.1 MGP_LPJ_G0019852.1 mouse_genomes_project 12 85719113 85740027 - MGP_LPJ_P0035344 Prox2 protein_coding protein_coding MGP_LPJ_T0035345.1 MGP_LPJ_G0019852.1 mouse_genomes_project 12 85727618 85729211 - Prox2 protein_coding retained_intron MGP_LPJ_T0000110.1 MGP_LPJ_G0000086.1 mouse_genomes_project 12 117186928 117187363 - MGP_LPJ_P0000110 Ighv15-2 IG_V_gene IG_V_gene MGP_LPJ_T0000111.1 MGP_LPJ_G0000086.1 mouse_genomes_project 12 117186928 117187363 - MGP_LPJ_P0000111 Ighv15-2 IG_V_gene IG_V_gene MGP_LPJ_T0034690.1 MGP_LPJ_G0019622.1 mouse_genomes_project 12 49934601 49938298 - MGP_LPJ_P0034690 Tuba1c protein_coding protein_coding MGP_LPJ_T0009850.1 MGP_LPJ_G0007968.1 mouse_genomes_project 12 111641842 111641909 + Mir540 miRNA miRNA MGP_LPJ_T0034923.1 MGP_LPJ_G0019714.1 mouse_genomes_project 12 70731889 70753455 + Psma3 protein_coding retained_intron MGP_LPJ_T0034924.1 MGP_LPJ_G0019714.1 mouse_genomes_project 12 70731889 70753875 + MGP_LPJ_P0034924 Psma3 protein_coding nonsense_mediated_decay MGP_LPJ_T0034925.1 MGP_LPJ_G0019714.1 mouse_genomes_project 12 70731911 70753458 + MGP_LPJ_P0034925 Psma3 protein_coding nonsense_mediated_decay MGP_LPJ_T0034926.1 MGP_LPJ_G0019714.1 mouse_genomes_project 12 70731926 70736919 + Psma3 protein_coding retained_intron MGP_LPJ_T0034927.1 MGP_LPJ_G0019714.1 mouse_genomes_project 12 70731933 70753429 + MGP_LPJ_P0034927 Psma3 protein_coding nonsense_mediated_decay MGP_LPJ_T0034928.1 MGP_LPJ_G0019714.1 mouse_genomes_project 12 70731937 70742059 + Psma3 protein_coding retained_intron MGP_LPJ_T0034929.1 MGP_LPJ_G0019714.1 mouse_genomes_project 12 70731965 70753349 + MGP_LPJ_P0034929 Psma3 protein_coding protein_coding MGP_LPJ_T0034930.1 MGP_LPJ_G0019714.1 mouse_genomes_project 12 70744113 70753459 + MGP_LPJ_P0034930 Psma3 protein_coding protein_coding MGP_LPJ_T0006524.1 MGP_LPJ_G0005420.1 mouse_genomes_project 12 113793549 113795631 - 2810029C07Rik lincRNA lincRNA MGP_LPJ_T0000085.1 MGP_LPJ_G0000068.1 mouse_genomes_project 12 116832265 116832806 - MGP_LPJ_P0000085 Ighv7-4 IG_V_gene IG_V_gene MGP_LPJ_T0000086.1 MGP_LPJ_G0000068.1 mouse_genomes_project 12 116832265 116832732 - MGP_LPJ_P0000086 Ighv7-4 IG_V_gene IG_V_gene MGP_LPJ_T0000103.1 MGP_LPJ_G0000080.1 mouse_genomes_project 12 117073174 117073614 - MGP_LPJ_P0000103 Ighv8-2 IG_V_gene IG_V_gene MGP_LPJ_T0035947.1 MGP_LPJ_G0020047.1 mouse_genomes_project 12 114221310 114226912 - MGP_LPJ_P0035947 2010107E04Rik protein_coding protein_coding MGP_LPJ_T0006485.1 MGP_LPJ_G0005404.1 mouse_genomes_project 12 109032344 109046582 - Gm16084 lincRNA lincRNA MGP_LPJ_T0003413.1 MGP_LPJ_G0003135.1 mouse_genomes_project 12 56588033 56596965 - Gm16246 antisense antisense MGP_LPJ_T0035880.1 MGP_LPJ_G0020027.1 mouse_genomes_project 12 113146127 113149815 - MGP_LPJ_P0035880 Ankrd9 protein_coding protein_coding MGP_LPJ_T0035881.1 MGP_LPJ_G0020027.1 mouse_genomes_project 12 113147200 113149030 - MGP_LPJ_P0035881 Ankrd9 protein_coding protein_coding MGP_LPJ_T0035882.1 MGP_LPJ_G0020027.1 mouse_genomes_project 12 113147201 113149718 - MGP_LPJ_P0035882 Ankrd9 protein_coding protein_coding MGP_LPJ_T0035883.1 MGP_LPJ_G0020027.1 mouse_genomes_project 12 113147201 113149796 - MGP_LPJ_P0035883 Ankrd9 protein_coding protein_coding MGP_LPJ_T0035884.1 MGP_LPJ_G0020027.1 mouse_genomes_project 12 113147201 113149393 - MGP_LPJ_P0035884 Ankrd9 protein_coding protein_coding MGP_LPJ_T0035885.1 MGP_LPJ_G0020027.1 mouse_genomes_project 12 113147203 113149770 - MGP_LPJ_P0035885 Ankrd9 protein_coding protein_coding MGP_LPJ_T0035886.1 MGP_LPJ_G0020027.1 mouse_genomes_project 12 113148746 113149354 - Ankrd9 protein_coding processed_transcript MGP_LPJ_T0000028.1 MGP_LPJ_G0000021.1 mouse_genomes_project 12 115856491 115856520 - MGP_LPJ_P0000028 Gm37327 IG_D_gene IG_D_gene MGP_LPJ_T0009792.1 MGP_LPJ_G0007910.1 mouse_genomes_project 12 553169 553232 + Gm26050 miRNA miRNA MGP_LPJ_T0034493.1 MGP_LPJ_G0019552.1 mouse_genomes_project 12 27919227 27999808 + MGP_LPJ_P0034493 Pxdn protein_coding protein_coding MGP_LPJ_T0034494.1 MGP_LPJ_G0019552.1 mouse_genomes_project 12 27919241 27970704 + Pxdn protein_coding retained_intron MGP_LPJ_T0034495.1 MGP_LPJ_G0019552.1 mouse_genomes_project 12 27919241 27970152 + MGP_LPJ_P0034495 Pxdn protein_coding protein_coding MGP_LPJ_T0034496.1 MGP_LPJ_G0019552.1 mouse_genomes_project 12 27977637 27983550 + Pxdn protein_coding processed_transcript MGP_LPJ_T0034497.1 MGP_LPJ_G0019552.1 mouse_genomes_project 12 27977643 27980988 + Pxdn protein_coding retained_intron MGP_LPJ_T0034498.1 MGP_LPJ_G0019552.1 mouse_genomes_project 12 27981016 27983692 + Pxdn protein_coding retained_intron MGP_LPJ_T0034675.1 MGP_LPJ_G0019614.1 mouse_genomes_project 12 43409447 43640197 - MGP_LPJ_P0034675 Stxbp6 protein_coding protein_coding MGP_LPJ_T0034676.1 MGP_LPJ_G0019614.1 mouse_genomes_project 12 43412180 43640578 - MGP_LPJ_P0034676 Stxbp6 protein_coding protein_coding MGP_LPJ_T0034677.1 MGP_LPJ_G0019614.1 mouse_genomes_project 12 43419612 43578353 - Stxbp6 protein_coding processed_transcript MGP_LPJ_T0034678.1 MGP_LPJ_G0019614.1 mouse_genomes_project 12 43461734 43640239 - MGP_LPJ_P0034678 Stxbp6 protein_coding protein_coding MGP_LPJ_T0034679.1 MGP_LPJ_G0019614.1 mouse_genomes_project 12 43578320 43640403 - MGP_LPJ_P0034679 Stxbp6 protein_coding nonsense_mediated_decay MGP_LPJ_T0035478.1 MGP_LPJ_G0019896.1 mouse_genomes_project 12 89151049 89256326 + MGP_LPJ_P0035478 Adck1 protein_coding protein_coding MGP_LPJ_T0035479.1 MGP_LPJ_G0019896.1 mouse_genomes_project 12 89151296 89256325 + MGP_LPJ_P0035479 Adck1 protein_coding protein_coding MGP_LPJ_T0000012.1 MGP_LPJ_G0000009.1 mouse_genomes_project 12 115763415 115772999 - MGP_LPJ_P0000012 Ighd IG_C_gene IG_C_gene MGP_LPJ_T0000013.1 MGP_LPJ_G0000009.1 mouse_genomes_project 12 115766363 115772999 - MGP_LPJ_P0000013 Ighd IG_C_gene IG_C_gene MGP_LPJ_T0036028.1 MGP_LPJ_G0000009.1 mouse_genomes_project 12 115764346 115772979 - MGP_LPJ_P0036028 Ighd IG_C_gene unknown_likely_coding MGP_LPJ_T0036029.1 MGP_LPJ_G0000009.1 mouse_genomes_project 12 115764346 115772838 - MGP_LPJ_P0036029 Ighd IG_C_gene unknown_likely_coding MGP_LPJ_T0034660.1 MGP_LPJ_G0019608.1 mouse_genomes_project 12 38860224 39281084 + MGP_LPJ_P0034660 Dock4 protein_coding protein_coding MGP_LPJ_T0034708.1 MGP_LPJ_G0019632.1 mouse_genomes_project 12 50971563 51176930 + MGP_LPJ_P0034708 Nubpl protein_coding protein_coding MGP_LPJ_T0034709.1 MGP_LPJ_G0019632.1 mouse_genomes_project 12 50971582 51013200 + Nubpl protein_coding retained_intron MGP_LPJ_T0034710.1 MGP_LPJ_G0019632.1 mouse_genomes_project 12 50971587 50974911 + Nubpl protein_coding retained_intron MGP_LPJ_T0034711.1 MGP_LPJ_G0019632.1 mouse_genomes_project 12 51001282 51167179 + MGP_LPJ_P0034711 Nubpl protein_coding nonsense_mediated_decay MGP_LPJ_T0017253.1 MGP_LPJ_G0015152.1 mouse_genomes_project 12 104161256 104224868 - Gm28373 processed_transcript processed_transcript MGP_LPJ_T0012853.1 MGP_LPJ_G0010944.1 mouse_genomes_project 12 119507059 119507357 + processed_pseudogene processed_pseudogene MGP_LPJ_T0034745.1 MGP_LPJ_G0019649.1 mouse_genomes_project 12 54421701 54459678 + MGP_LPJ_P0034745 Psma6 protein_coding protein_coding MGP_LPJ_T0034746.1 MGP_LPJ_G0019649.1 mouse_genomes_project 12 54438359 54459822 + MGP_LPJ_P0034746 Psma6 protein_coding protein_coding MGP_LPJ_T0034747.1 MGP_LPJ_G0019649.1 mouse_genomes_project 12 54438379 54459809 + MGP_LPJ_P0034747 Psma6 protein_coding nonsense_mediated_decay MGP_LPJ_T0034748.1 MGP_LPJ_G0019649.1 mouse_genomes_project 12 54446967 54451875 + Psma6 protein_coding processed_transcript MGP_LPJ_T0017234.1 MGP_LPJ_G0015141.1 mouse_genomes_project 12 31246636 31284619 - F730043M19Rik processed_transcript processed_transcript MGP_LPJ_T0017235.1 MGP_LPJ_G0015141.1 mouse_genomes_project 12 31262189 31283942 - F730043M19Rik processed_transcript processed_transcript MGP_LPJ_T0017236.1 MGP_LPJ_G0015141.1 mouse_genomes_project 12 31269466 31284619 - F730043M19Rik processed_transcript processed_transcript MGP_LPJ_T0017237.1 MGP_LPJ_G0015141.1 mouse_genomes_project 12 31271761 31284630 - F730043M19Rik processed_transcript processed_transcript MGP_LPJ_T0017238.1 MGP_LPJ_G0015141.1 mouse_genomes_project 12 31272495 31276704 - F730043M19Rik processed_transcript processed_transcript MGP_LPJ_T0017239.1 MGP_LPJ_G0015141.1 mouse_genomes_project 12 31284177 31284629 - F730043M19Rik processed_transcript processed_transcript MGP_LPJ_T0035765.1 MGP_LPJ_G0019995.1 mouse_genomes_project 12 107463761 107482337 + MGP_LPJ_P0035765 Gskip protein_coding protein_coding MGP_LPJ_T0034944.1 MGP_LPJ_G0019721.1 mouse_genomes_project 12 71885757 71887131 - MGP_LPJ_P0034944 Gpr135 protein_coding protein_coding MGP_LPJ_T0035877.1 MGP_LPJ_G0020025.1 mouse_genomes_project 12 113044064 113060223 - MGP_LPJ_P0035877 Cinp protein_coding protein_coding MGP_LPJ_T0034343.1 MGP_LPJ_G0019494.1 mouse_genomes_project 12 6114884 6174614 + MGP_LPJ_P0034343 Wdr35 protein_coding protein_coding MGP_LPJ_T0034344.1 MGP_LPJ_G0019494.1 mouse_genomes_project 12 6115003 6134889 + Wdr35 protein_coding retained_intron MGP_LPJ_T0034345.1 MGP_LPJ_G0019494.1 mouse_genomes_project 12 6115003 6134894 + MGP_LPJ_P0034345 Wdr35 protein_coding nonsense_mediated_decay MGP_LPJ_T0034346.1 MGP_LPJ_G0019494.1 mouse_genomes_project 12 6115039 6174613 + MGP_LPJ_P0034346 Wdr35 protein_coding protein_coding MGP_LPJ_T0034347.1 MGP_LPJ_G0019494.1 mouse_genomes_project 12 6115051 6168049 + Wdr35 protein_coding retained_intron MGP_LPJ_T0034348.1 MGP_LPJ_G0019494.1 mouse_genomes_project 12 6115861 6126433 + Wdr35 protein_coding retained_intron MGP_LPJ_T0034349.1 MGP_LPJ_G0019494.1 mouse_genomes_project 12 6167655 6170233 + Wdr35 protein_coding retained_intron MGP_LPJ_T0000009.1 MGP_LPJ_G0000007.1 mouse_genomes_project 12 115681895 115687179 - MGP_LPJ_P0000009 Ighg1 IG_C_gene IG_C_gene MGP_LPJ_T0000010.1 MGP_LPJ_G0000007.1 mouse_genomes_project 12 115685529 115687179 - MGP_LPJ_P0000010 Ighg1 IG_C_gene IG_C_gene MGP_LPJ_T0099003.1 MGP_LPJ_G0037266.1 mouse_genomes_project 12 102644904 102647894 - Gm22749 snRNA snRNA MGP_LPJ_T0009795.1 MGP_LPJ_G0007913.1 mouse_genomes_project 12 13275349 13275457 - Mir6387 miRNA miRNA MGP_LPJ_T0012805.1 MGP_LPJ_G0010896.1 mouse_genomes_project 12 62361180 62362180 - processed_pseudogene processed_pseudogene MGP_LPJ_T0035949.1 MGP_LPJ_G0020049.1 mouse_genomes_project 12 114239003 114241210 - MGP_LPJ_P0035949 Rd3l protein_coding protein_coding MGP_LPJ_T0035950.1 MGP_LPJ_G0020049.1 mouse_genomes_project 12 114239004 114240036 - MGP_LPJ_P0035950 Rd3l protein_coding protein_coding MGP_LPJ_T0035951.1 MGP_LPJ_G0020049.1 mouse_genomes_project 12 114239037 114240947 - MGP_LPJ_P0035951 Rd3l protein_coding protein_coding MGP_LPJ_T0035952.1 MGP_LPJ_G0020049.1 mouse_genomes_project 12 114239081 114240362 - MGP_LPJ_P0035952 Rd3l protein_coding protein_coding MGP_LPJ_T0035953.1 MGP_LPJ_G0020049.1 mouse_genomes_project 12 114239083 114240995 - MGP_LPJ_P0035953 Rd3l protein_coding protein_coding MGP_LPJ_T0034445.1 MGP_LPJ_G0019532.1 mouse_genomes_project 12 22319565 22365887 + MGP_LPJ_P0034445 Grhl1 protein_coding protein_coding MGP_LPJ_T0034446.1 MGP_LPJ_G0019532.1 mouse_genomes_project 12 22327956 22365891 + MGP_LPJ_P0034446 Grhl1 protein_coding protein_coding MGP_LPJ_T0000061.1 MGP_LPJ_G0000049.1 mouse_genomes_project 12 116249425 116250012 - MGP_LPJ_P0000061 IG_V_gene IG_V_gene MGP_LPJ_T0035439.1 MGP_LPJ_G0019882.1 mouse_genomes_project 12 87943955 87977984 - MGP_LPJ_P0035439 Tmed8 protein_coding protein_coding MGP_LPJ_T0034972.1 MGP_LPJ_G0019730.1 mouse_genomes_project 12 72649822 72691749 + MGP_LPJ_P0034972 Ppm1a protein_coding protein_coding MGP_LPJ_T0000144.1 MGP_LPJ_G0000106.1 mouse_genomes_project 12 118874473 118874951 - MGP_LPJ_P0000144 IG_V_gene IG_V_gene MGP_LPJ_T0006477.1 MGP_LPJ_G0005399.1 mouse_genomes_project 12 108540161 108573360 - 4933406K04Rik lincRNA lincRNA MGP_LPJ_T0006478.1 MGP_LPJ_G0005399.1 mouse_genomes_project 12 108551226 108573322 - 4933406K04Rik lincRNA lincRNA MGP_LPJ_T0006479.1 MGP_LPJ_G0005399.1 mouse_genomes_project 12 108558280 108573331 - 4933406K04Rik lincRNA lincRNA MGP_LPJ_T0006480.1 MGP_LPJ_G0005399.1 mouse_genomes_project 12 108563158 108573360 - 4933406K04Rik lincRNA lincRNA MGP_LPJ_T0012815.1 MGP_LPJ_G0010906.1 mouse_genomes_project 12 81755514 81755826 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012798.1 MGP_LPJ_G0010889.1 mouse_genomes_project 12 56408601 56409067 - processed_pseudogene processed_pseudogene MGP_LPJ_T0036060.1 MGP_LPJ_G0020089.1 mouse_genomes_project 12 121862727 121868974 + MGP_LPJ_P0036060 Sp8 protein_coding protein_coding MGP_LPJ_T0098973.1 MGP_LPJ_G0037236.1 mouse_genomes_project 12 53204963 53205112 + Gm22220 snRNA snRNA MGP_LPJ_T0034404.1 MGP_LPJ_G0019519.1 mouse_genomes_project 12 14700513 14705310 - MGP_LPJ_P0034404 Kcnf1 protein_coding protein_coding MGP_LPJ_T0034425.1 MGP_LPJ_G0019525.1 mouse_genomes_project 12 18920888 18939133 - MGP_LPJ_P0034425 Itgb1bp1 protein_coding protein_coding MGP_LPJ_T0034426.1 MGP_LPJ_G0019525.1 mouse_genomes_project 12 18921175 18938993 - MGP_LPJ_P0034426 Itgb1bp1 protein_coding protein_coding MGP_LPJ_T0034427.1 MGP_LPJ_G0019525.1 mouse_genomes_project 12 18921786 18923208 - MGP_LPJ_P0034427 Itgb1bp1 protein_coding protein_coding MGP_LPJ_T0034428.1 MGP_LPJ_G0019525.1 mouse_genomes_project 12 18922372 18939081 - MGP_LPJ_P0034428 Itgb1bp1 protein_coding protein_coding MGP_LPJ_T0034429.1 MGP_LPJ_G0019525.1 mouse_genomes_project 12 18922510 18923855 - Itgb1bp1 protein_coding retained_intron MGP_LPJ_T0034364.1 MGP_LPJ_G0019505.1 mouse_genomes_project 12 9565344 9685038 + MGP_LPJ_P0034364 Fam49a protein_coding protein_coding MGP_LPJ_T0034365.1 MGP_LPJ_G0019505.1 mouse_genomes_project 12 9565344 9685038 + MGP_LPJ_P0034365 Fam49a protein_coding protein_coding MGP_LPJ_T0035457.1 MGP_LPJ_G0019889.1 mouse_genomes_project 12 88212986 88216584 - Alkbh1 protein_coding processed_transcript MGP_LPJ_T0035458.1 MGP_LPJ_G0019889.1 mouse_genomes_project 12 88213315 88230981 - MGP_LPJ_P0035458 Alkbh1 protein_coding protein_coding MGP_LPJ_T0035459.1 MGP_LPJ_G0019889.1 mouse_genomes_project 12 88215223 88230968 - MGP_LPJ_P0035459 Alkbh1 protein_coding nonsense_mediated_decay MGP_LPJ_T0035460.1 MGP_LPJ_G0019889.1 mouse_genomes_project 12 88215223 88230970 - MGP_LPJ_P0035460 Alkbh1 protein_coding nonsense_mediated_decay MGP_LPJ_T0035461.1 MGP_LPJ_G0019889.1 mouse_genomes_project 12 88215226 88230978 - MGP_LPJ_P0035461 Alkbh1 protein_coding nonsense_mediated_decay MGP_LPJ_T0035462.1 MGP_LPJ_G0019889.1 mouse_genomes_project 12 88215956 88230970 - MGP_LPJ_P0035462 Alkbh1 protein_coding nonsense_mediated_decay MGP_LPJ_T0035463.1 MGP_LPJ_G0019889.1 mouse_genomes_project 12 88216267 88225707 - MGP_LPJ_P0035463 Alkbh1 protein_coding protein_coding MGP_LPJ_T0035464.1 MGP_LPJ_G0019889.1 mouse_genomes_project 12 88218576 88228874 - Alkbh1 protein_coding processed_transcript MGP_LPJ_T0035465.1 MGP_LPJ_G0019889.1 mouse_genomes_project 12 88220392 88230975 - MGP_LPJ_P0035465 Alkbh1 protein_coding nonsense_mediated_decay MGP_LPJ_T0035466.1 MGP_LPJ_G0019889.1 mouse_genomes_project 12 88220403 88230981 - Alkbh1 protein_coding retained_intron MGP_LPJ_T0035467.1 MGP_LPJ_G0019889.1 mouse_genomes_project 12 88229824 88231159 - Alkbh1 protein_coding retained_intron MGP_LPJ_T0035468.1 MGP_LPJ_G0019889.1 mouse_genomes_project 12 88230652 88231060 - MGP_LPJ_P0035468 Alkbh1 protein_coding protein_coding MGP_LPJ_T0017277.1 MGP_LPJ_G0015157.1 mouse_genomes_project 12 120074961 120081642 - Gm10421 processed_transcript antisense MGP_LPJ_T0017278.1 MGP_LPJ_G0015157.1 mouse_genomes_project 12 120075803 120081696 - Gm10421 processed_transcript retained_intron MGP_LPJ_T0017279.1 MGP_LPJ_G0015157.1 mouse_genomes_project 12 120081516 120082078 - Gm10421 processed_transcript antisense MGP_LPJ_T0034463.1 MGP_LPJ_G0019536.1 mouse_genomes_project 12 22586272 22723334 + MGP_LPJ_P0034463 Mboat2 protein_coding protein_coding MGP_LPJ_T0034464.1 MGP_LPJ_G0019536.1 mouse_genomes_project 12 22586272 22723334 + MGP_LPJ_P0034464 Mboat2 protein_coding protein_coding MGP_LPJ_T0006419.1 MGP_LPJ_G0005351.1 mouse_genomes_project 12 24991053 25010520 - Gm9866 lincRNA lincRNA MGP_LPJ_T0006420.1 MGP_LPJ_G0005351.1 mouse_genomes_project 12 24991059 25010842 - Gm9866 lincRNA lincRNA MGP_LPJ_T0006421.1 MGP_LPJ_G0005351.1 mouse_genomes_project 12 24992143 25010655 - Gm9866 lincRNA lincRNA MGP_LPJ_T0006422.1 MGP_LPJ_G0005351.1 mouse_genomes_project 12 24995662 25010671 - Gm9866 lincRNA lincRNA MGP_LPJ_T0012802.1 MGP_LPJ_G0010893.1 mouse_genomes_project 12 58533579 58534554 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009857.1 MGP_LPJ_G0007975.1 mouse_genomes_project 12 111652157 111652299 + Mir434 miRNA miRNA MGP_LPJ_T0009885.1 MGP_LPJ_G0008003.1 mouse_genomes_project 12 111790025 111790107 + Mir376b miRNA miRNA MGP_LPJ_T0035896.1 MGP_LPJ_G0020033.1 mouse_genomes_project 12 113607758 113613063 + MGP_LPJ_P0035896 A230065H16Rik protein_coding protein_coding MGP_LPJ_T0035720.1 MGP_LPJ_G0019969.1 mouse_genomes_project 12 105711606 105720779 + MGP_LPJ_P0035720 Serpina3a protein_coding protein_coding MGP_LPJ_T0035721.1 MGP_LPJ_G0019969.1 mouse_genomes_project 12 105711662 105720691 + MGP_LPJ_P0035721 Serpina3a protein_coding protein_coding MGP_LPJ_T0035722.1 MGP_LPJ_G0019969.1 mouse_genomes_project 12 105714852 105720401 + MGP_LPJ_P0035722 Serpina3a protein_coding protein_coding MGP_LPJ_T0034378.1 MGP_LPJ_G0019513.1 mouse_genomes_project 12 14163394 14170112 + MGP_LPJ_P0034378 Ntsr2 protein_coding protein_coding MGP_LPJ_T0009837.1 MGP_LPJ_G0007955.1 mouse_genomes_project 12 104495285 104495420 + Gm44324 miRNA miRNA MGP_LPJ_T0000142.1 MGP_LPJ_G0000104.1 mouse_genomes_project 12 118874473 118874922 - MGP_LPJ_P0000142 IG_V_gene IG_V_gene MGP_LPJ_T0009925.1 MGP_LPJ_G0008043.1 mouse_genomes_project 12 120183619 120183688 + Mir153 miRNA miRNA MGP_LPJ_T0034540.1 MGP_LPJ_G0019566.1 mouse_genomes_project 12 29650444 29692518 - MGP_LPJ_P0034540 Bcap29 protein_coding protein_coding MGP_LPJ_T0034541.1 MGP_LPJ_G0019566.1 mouse_genomes_project 12 29650444 29692457 - MGP_LPJ_P0034541 Bcap29 protein_coding protein_coding MGP_LPJ_T0100239.1 MGP_LPJ_G0038502.1 mouse_genomes_project 12 111701158 111701231 + Gm24899 snoRNA snoRNA MGP_LPJ_T0009826.1 MGP_LPJ_G0007944.1 mouse_genomes_project 12 87796972 87797072 + Gm25847 miRNA miRNA MGP_LPJ_T0000262.1 MGP_LPJ_G0000200.1 mouse_genomes_project 12 116040699 116041153 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0035647.1 MGP_LPJ_G0019942.1 mouse_genomes_project 12 104251594 104256033 - MGP_LPJ_P0035647 AK010878 protein_coding protein_coding MGP_LPJ_T0035648.1 MGP_LPJ_G0019942.1 mouse_genomes_project 12 104254513 104256036 - MGP_LPJ_P0035648 AK010878 protein_coding protein_coding MGP_LPJ_T0034685.1 MGP_LPJ_G0019617.1 mouse_genomes_project 12 48119899 48128793 + MGP_LPJ_P0034685 Gm43517 protein_coding protein_coding MGP_LPJ_T0034681.1 MGP_LPJ_G0019616.1 mouse_genomes_project 12 48117034 48119090 + Foxg1 protein_coding processed_transcript MGP_LPJ_T0034682.1 MGP_LPJ_G0019616.1 mouse_genomes_project 12 48117174 48117974 + Foxg1 protein_coding processed_transcript MGP_LPJ_T0034683.1 MGP_LPJ_G0019616.1 mouse_genomes_project 12 48117257 48121581 + MGP_LPJ_P0034683 Foxg1 protein_coding protein_coding MGP_LPJ_T0034684.1 MGP_LPJ_G0019616.1 mouse_genomes_project 12 48117380 48121587 + MGP_LPJ_P0034684 Foxg1 protein_coding protein_coding MGP_LPJ_T0099004.1 MGP_LPJ_G0037267.1 mouse_genomes_project 12 110886198 110886304 - Gm22079 snRNA snRNA MGP_LPJ_T0009849.1 MGP_LPJ_G0007967.1 mouse_genomes_project 12 111641575 111641636 - Mir3544 miRNA miRNA MGP_LPJ_T0035254.1 MGP_LPJ_G0019828.1 mouse_genomes_project 12 84660218 84673416 + MGP_LPJ_P0035254 Acot6 protein_coding protein_coding MGP_LPJ_T0035760.1 MGP_LPJ_G0019993.1 mouse_genomes_project 12 107381866 107384111 + MGP_LPJ_P0035760 Bdkrb1 protein_coding protein_coding MGP_LPJ_T0035761.1 MGP_LPJ_G0019993.1 mouse_genomes_project 12 107381900 107383754 + MGP_LPJ_P0035761 Bdkrb1 protein_coding protein_coding MGP_LPJ_T0035762.1 MGP_LPJ_G0019993.1 mouse_genomes_project 12 107382862 107384200 + MGP_LPJ_P0035762 Bdkrb1 protein_coding protein_coding MGP_LPJ_T0012826.1 MGP_LPJ_G0010917.1 mouse_genomes_project 12 97146645 97146999 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000014.1 MGP_LPJ_G0000010.1 mouse_genomes_project 12 115775224 115779383 - MGP_LPJ_P0000014 Ighm IG_C_gene IG_C_gene MGP_LPJ_T0000015.1 MGP_LPJ_G0000010.1 mouse_genomes_project 12 115777393 115779383 - MGP_LPJ_P0000015 Ighm IG_C_gene IG_C_gene MGP_LPJ_T0000269.1 MGP_LPJ_G0000207.1 mouse_genomes_project 12 116282211 116282592 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0035876.1 MGP_LPJ_G0020024.1 mouse_genomes_project 12 113021238 113041449 + MGP_LPJ_P0035876 Zfp839 protein_coding protein_coding MGP_LPJ_T0012845.1 MGP_LPJ_G0010936.1 mouse_genomes_project 12 115754218 115754575 + processed_pseudogene processed_pseudogene MGP_LPJ_T0035208.1 MGP_LPJ_G0019815.1 mouse_genomes_project 12 84060766 84112636 - MGP_LPJ_P0035208 Zfyve1 protein_coding protein_coding MGP_LPJ_T0006459.1 MGP_LPJ_G0005382.1 mouse_genomes_project 12 87640635 87641799 - Gm26698 lincRNA lincRNA MGP_LPJ_T0000038.1 MGP_LPJ_G0000031.1 mouse_genomes_project 12 115784879 115784927 - MGP_LPJ_P0000038 Ighj3 IG_J_gene IG_J_gene MGP_LPJ_T0101818.1 MGP_LPJ_G0039855.1 mouse_genomes_project 12 118855446 118856079 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0012825.1 MGP_LPJ_G0010916.1 mouse_genomes_project 12 92887493 92888973 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009819.1 MGP_LPJ_G0007937.1 mouse_genomes_project 12 75964377 75964457 + Mir5101 miRNA miRNA MGP_LPJ_T0034543.1 MGP_LPJ_G0019568.1 mouse_genomes_project 12 29713654 30013811 + MGP_LPJ_P0034543 Cog5 protein_coding protein_coding MGP_LPJ_T0034547.1 MGP_LPJ_G0019568.1 mouse_genomes_project 12 29825150 30001951 + MGP_LPJ_P0034547 Cog5 protein_coding unknown_likely_coding MGP_LPJ_T0011351.1 MGP_LPJ_G0009469.1 mouse_genomes_project 12 91899399 91899722 + Gm26477 misc_RNA misc_RNA MGP_LPJ_T0034886.1 MGP_LPJ_G0019703.1 mouse_genomes_project 12 69481925 69576595 - Map4k5 protein_coding processed_transcript MGP_LPJ_T0034887.1 MGP_LPJ_G0019703.1 mouse_genomes_project 12 69481925 69576501 - MGP_LPJ_P0034887 Map4k5 protein_coding protein_coding MGP_LPJ_T0034888.1 MGP_LPJ_G0019703.1 mouse_genomes_project 12 69481925 69576692 - MGP_LPJ_P0034888 Map4k5 protein_coding protein_coding MGP_LPJ_T0034889.1 MGP_LPJ_G0019703.1 mouse_genomes_project 12 69481934 69576655 - MGP_LPJ_P0034889 Map4k5 protein_coding protein_coding MGP_LPJ_T0034890.1 MGP_LPJ_G0019703.1 mouse_genomes_project 12 69481934 69576595 - MGP_LPJ_P0034890 Map4k5 protein_coding protein_coding MGP_LPJ_T0034891.1 MGP_LPJ_G0019703.1 mouse_genomes_project 12 69481936 69496596 - Map4k5 protein_coding retained_intron MGP_LPJ_T0034892.1 MGP_LPJ_G0019703.1 mouse_genomes_project 12 69495924 69497001 - Map4k5 protein_coding processed_transcript MGP_LPJ_T0034893.1 MGP_LPJ_G0019703.1 mouse_genomes_project 12 69523016 69556364 - Map4k5 protein_coding retained_intron MGP_LPJ_T0034894.1 MGP_LPJ_G0019703.1 mouse_genomes_project 12 69527694 69576615 - Map4k5 protein_coding retained_intron MGP_LPJ_T0034895.1 MGP_LPJ_G0019703.1 mouse_genomes_project 12 69528164 69536596 - Map4k5 protein_coding retained_intron MGP_LPJ_T0009924.1 MGP_LPJ_G0008042.1 mouse_genomes_project 12 119143323 119143387 - Gm23190 miRNA miRNA MGP_LPJ_T0000289.1 MGP_LPJ_G0000227.1 mouse_genomes_project 12 117225149 117225587 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0012793.1 MGP_LPJ_G0010884.1 mouse_genomes_project 12 50590230 50590541 - processed_pseudogene processed_pseudogene MGP_LPJ_T0035987.1 MGP_LPJ_G0020062.1 mouse_genomes_project 12 115106488 115114289 + MGP_LPJ_P0035987 BC022687 protein_coding protein_coding MGP_LPJ_T0035988.1 MGP_LPJ_G0020062.1 mouse_genomes_project 12 115106488 115114824 + MGP_LPJ_P0035988 BC022687 protein_coding protein_coding MGP_LPJ_T0035245.1 MGP_LPJ_G0019822.1 mouse_genomes_project 12 84495036 84525807 - MGP_LPJ_P0035245 Heatr4 protein_coding protein_coding MGP_LPJ_T0012796.1 MGP_LPJ_G0010887.1 mouse_genomes_project 12 54434021 54435349 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006458.1 MGP_LPJ_G0005381.1 mouse_genomes_project 12 86997183 87012435 - 4732487G21Rik lincRNA lincRNA MGP_LPJ_T0035741.1 MGP_LPJ_G0019981.1 mouse_genomes_project 12 106371105 106432700 - MGP_LPJ_P0035741 Dicer1 protein_coding unknown_likely_coding MGP_LPJ_T0100221.1 MGP_LPJ_G0038484.1 mouse_genomes_project 12 65076256 65076388 - Gm23948 snoRNA snoRNA MGP_LPJ_T0035878.1 MGP_LPJ_G0020026.1 mouse_genomes_project 12 113060341 113143332 + MGP_LPJ_P0035878 Tecpr2 protein_coding protein_coding MGP_LPJ_T0035879.1 MGP_LPJ_G0020026.1 mouse_genomes_project 12 113060341 113143334 + MGP_LPJ_P0035879 Tecpr2 protein_coding protein_coding MGP_LPJ_T0036067.1 MGP_LPJ_G0020092.1 mouse_genomes_project 12 122437971 122461100 + MGP_LPJ_P0036067 Macc1 protein_coding protein_coding MGP_LPJ_T0034362.1 MGP_LPJ_G0019503.1 mouse_genomes_project 12 8579630 8697696 - MGP_LPJ_P0034362 Vsnl1 protein_coding protein_coding MGP_LPJ_T0035691.1 MGP_LPJ_G0019954.1 mouse_genomes_project 12 104969724 104971238 - MGP_LPJ_P0035691 Ifi27l2a protein_coding protein_coding MGP_LPJ_T0003404.1 MGP_LPJ_G0003128.1 mouse_genomes_project 12 31330955 31351104 - antisense antisense MGP_LPJ_T0035748.1 MGP_LPJ_G0019987.1 mouse_genomes_project 12 106872027 106921334 + MGP_LPJ_P0035748 Tcl1b3 protein_coding protein_coding MGP_LPJ_T0006431.1 MGP_LPJ_G0005359.1 mouse_genomes_project 12 35454523 35464155 - Gm29007 lincRNA lincRNA MGP_LPJ_T0035115.1 MGP_LPJ_G0019787.1 mouse_genomes_project 12 80439700 80534962 - MGP_LPJ_P0035115 Actn1 protein_coding protein_coding MGP_LPJ_T0035116.1 MGP_LPJ_G0019787.1 mouse_genomes_project 12 80440480 80534682 - MGP_LPJ_P0035116 Actn1 protein_coding unknown_likely_coding MGP_LPJ_T0035117.1 MGP_LPJ_G0019787.1 mouse_genomes_project 12 80440480 80534682 - MGP_LPJ_P0035117 Actn1 protein_coding protein_coding MGP_LPJ_T0100248.1 MGP_LPJ_G0038511.1 mouse_genomes_project 12 111722577 111722649 + Gm27604 snoRNA snoRNA MGP_LPJ_T0009806.1 MGP_LPJ_G0007924.1 mouse_genomes_project 12 38619268 38619368 - Mir1938 miRNA miRNA MGP_LPJ_T0009881.1 MGP_LPJ_G0007999.1 mouse_genomes_project 12 111785323 111785386 + Mir495 miRNA miRNA MGP_LPJ_T0100201.1 MGP_LPJ_G0038464.1 mouse_genomes_project 12 29294529 29294659 - Gm24613 snoRNA snoRNA MGP_LPJ_T0009862.1 MGP_LPJ_G0007980.1 mouse_genomes_project 12 111670431 111670551 + Mir1188 miRNA miRNA MGP_LPJ_T0009888.1 MGP_LPJ_G0008006.1 mouse_genomes_project 12 111790880 111790959 + Mir300 miRNA miRNA MGP_LPJ_T0099006.1 MGP_LPJ_G0037269.1 mouse_genomes_project 12 119385780 119385884 - Gm25112 snRNA snRNA MGP_LPJ_T0035475.1 MGP_LPJ_G0019894.1 mouse_genomes_project 12 88903833 88919770 - MGP_LPJ_P0035475 Oog1 protein_coding protein_coding MGP_LPJ_T0035141.1 MGP_LPJ_G0019799.1 mouse_genomes_project 12 81547315 81690455 - MGP_LPJ_P0035141 Slc8a3 protein_coding protein_coding MGP_LPJ_T0035142.1 MGP_LPJ_G0019799.1 mouse_genomes_project 12 81547676 81690250 - MGP_LPJ_P0035142 Slc8a3 protein_coding protein_coding MGP_LPJ_T0035143.1 MGP_LPJ_G0019799.1 mouse_genomes_project 12 81548846 81690471 - MGP_LPJ_P0035143 Slc8a3 protein_coding protein_coding MGP_LPJ_T0035144.1 MGP_LPJ_G0019799.1 mouse_genomes_project 12 81551797 81648075 - MGP_LPJ_P0035144 Slc8a3 protein_coding protein_coding MGP_LPJ_T0035145.1 MGP_LPJ_G0019799.1 mouse_genomes_project 12 81563425 81690471 - Slc8a3 protein_coding retained_intron MGP_LPJ_T0003415.1 MGP_LPJ_G0003137.1 mouse_genomes_project 12 68900535 68905953 - Gm15561 antisense antisense MGP_LPJ_T0034432.1 MGP_LPJ_G0019528.1 mouse_genomes_project 12 18978363 19031933 - MGP_LPJ_P0034432 Adam17 protein_coding protein_coding MGP_LPJ_T0034433.1 MGP_LPJ_G0019528.1 mouse_genomes_project 12 18978371 19031972 - MGP_LPJ_P0034433 Adam17 protein_coding protein_coding MGP_LPJ_T0034434.1 MGP_LPJ_G0019528.1 mouse_genomes_project 12 18978371 19031933 - MGP_LPJ_P0034434 Adam17 protein_coding nonsense_mediated_decay MGP_LPJ_T0034435.1 MGP_LPJ_G0019528.1 mouse_genomes_project 12 18978371 19031933 - MGP_LPJ_P0034435 Adam17 protein_coding nonsense_mediated_decay MGP_LPJ_T0034436.1 MGP_LPJ_G0019528.1 mouse_genomes_project 12 18980379 18984167 - Adam17 protein_coding processed_transcript MGP_LPJ_T0034437.1 MGP_LPJ_G0019528.1 mouse_genomes_project 12 18982864 18999206 - Adam17 protein_coding retained_intron MGP_LPJ_T0034438.1 MGP_LPJ_G0019528.1 mouse_genomes_project 12 18984949 18987464 - Adam17 protein_coding retained_intron MGP_LPJ_T0034439.1 MGP_LPJ_G0019528.1 mouse_genomes_project 12 19006063 19031874 - MGP_LPJ_P0034439 Adam17 protein_coding nonsense_mediated_decay MGP_LPJ_T0011355.1 MGP_LPJ_G0009473.1 mouse_genomes_project 12 111594210 111594293 + Gm27596 misc_RNA misc_RNA MGP_LPJ_T0035167.1 MGP_LPJ_G0019805.1 mouse_genomes_project 12 81934676 81948848 - MGP_LPJ_P0035167 Adam21 protein_coding protein_coding MGP_LPJ_T0009902.1 MGP_LPJ_G0008020.1 mouse_genomes_project 12 111807075 111807143 + Mir377 miRNA miRNA MGP_LPJ_T0035304.1 MGP_LPJ_G0019839.1 mouse_genomes_project 12 85019898 85041296 - MGP_LPJ_P0035304 Aldh6a1 protein_coding protein_coding MGP_LPJ_T0034283.1 MGP_LPJ_G0019472.1 mouse_genomes_project 12 1506769 1640147 + MGP_LPJ_P0034283 Itsn2 protein_coding protein_coding MGP_LPJ_T0034284.1 MGP_LPJ_G0019472.1 mouse_genomes_project 12 1526996 1597253 + MGP_LPJ_P0034284 Itsn2 protein_coding unknown_likely_coding MGP_LPJ_T0012832.1 MGP_LPJ_G0010923.1 mouse_genomes_project 12 103365853 103366313 + processed_pseudogene processed_pseudogene MGP_LPJ_T0034668.1 MGP_LPJ_G0019612.1 mouse_genomes_project 12 42811601 42819201 + MGP_LPJ_P0034668 Pnpla8 protein_coding protein_coding MGP_LPJ_T0034669.1 MGP_LPJ_G0019612.1 mouse_genomes_project 12 42818883 42849392 + MGP_LPJ_P0034669 Pnpla8 protein_coding protein_coding MGP_LPJ_T0034670.1 MGP_LPJ_G0019612.1 mouse_genomes_project 12 42818977 42848648 + MGP_LPJ_P0034670 Pnpla8 protein_coding protein_coding MGP_LPJ_T0034671.1 MGP_LPJ_G0019612.1 mouse_genomes_project 12 42834131 42848893 + MGP_LPJ_P0034671 Pnpla8 protein_coding protein_coding MGP_LPJ_T0034350.1 MGP_LPJ_G0019495.1 mouse_genomes_project 12 6175748 6182146 + MGP_LPJ_P0034350 Ttc32 protein_coding protein_coding MGP_LPJ_T0035495.1 MGP_LPJ_G0019899.1 mouse_genomes_project 12 91915836 92305578 - MGP_LPJ_P0035495 Cep128 protein_coding protein_coding MGP_LPJ_T0035496.1 MGP_LPJ_G0019899.1 mouse_genomes_project 12 91915836 92182433 - MGP_LPJ_P0035496 Cep128 protein_coding nonsense_mediated_decay MGP_LPJ_T0035497.1 MGP_LPJ_G0019899.1 mouse_genomes_project 12 91916684 91979061 - Cep128 protein_coding processed_transcript MGP_LPJ_T0035498.1 MGP_LPJ_G0019899.1 mouse_genomes_project 12 91916686 91951438 - Cep128 protein_coding processed_transcript MGP_LPJ_T0035499.1 MGP_LPJ_G0019899.1 mouse_genomes_project 12 91916686 91951438 - Cep128 protein_coding processed_transcript MGP_LPJ_T0035500.1 MGP_LPJ_G0019899.1 mouse_genomes_project 12 91916909 92100694 - Cep128 protein_coding processed_transcript MGP_LPJ_T0035501.1 MGP_LPJ_G0019899.1 mouse_genomes_project 12 91943789 92100747 - Cep128 protein_coding processed_transcript MGP_LPJ_T0035502.1 MGP_LPJ_G0019899.1 mouse_genomes_project 12 92132432 92175540 - MGP_LPJ_P0035502 Cep128 protein_coding protein_coding MGP_LPJ_T0035503.1 MGP_LPJ_G0019899.1 mouse_genomes_project 12 92202873 92305578 - Cep128 protein_coding retained_intron MGP_LPJ_T0035504.1 MGP_LPJ_G0019899.1 mouse_genomes_project 12 92237382 92253756 - Cep128 protein_coding processed_transcript MGP_LPJ_T0035505.1 MGP_LPJ_G0019899.1 mouse_genomes_project 12 92258595 92305528 - Cep128 protein_coding retained_intron MGP_LPJ_T0035506.1 MGP_LPJ_G0019899.1 mouse_genomes_project 12 92260417 92305578 - Cep128 protein_coding processed_transcript MGP_LPJ_T0035507.1 MGP_LPJ_G0019899.1 mouse_genomes_project 12 92284061 92305522 - Cep128 protein_coding retained_intron MGP_LPJ_T0035229.1 MGP_LPJ_G0019818.1 mouse_genomes_project 12 84288912 84317640 + MGP_LPJ_P0035229 Papln protein_coding protein_coding MGP_LPJ_T0035230.1 MGP_LPJ_G0019818.1 mouse_genomes_project 12 84288932 84317613 + MGP_LPJ_P0035230 Papln protein_coding protein_coding MGP_LPJ_T0035231.1 MGP_LPJ_G0019818.1 mouse_genomes_project 12 84288940 84306390 + Papln protein_coding retained_intron MGP_LPJ_T0009907.1 MGP_LPJ_G0008025.1 mouse_genomes_project 12 111809983 111810062 + Mir369 miRNA miRNA MGP_LPJ_T0000895.1 MGP_LPJ_G0000824.1 mouse_genomes_project 12 83421771 83423082 - TEC TEC MGP_LPJ_T0034713.1 MGP_LPJ_G0019634.1 mouse_genomes_project 12 51585911 52084147 + MGP_LPJ_P0034713 Akap6 protein_coding protein_coding MGP_LPJ_T0035138.1 MGP_LPJ_G0019798.1 mouse_genomes_project 12 81360198 81535823 + MGP_LPJ_P0035138 Smoc1 protein_coding protein_coding MGP_LPJ_T0035139.1 MGP_LPJ_G0019798.1 mouse_genomes_project 12 81360218 81535819 + MGP_LPJ_P0035139 Smoc1 protein_coding protein_coding MGP_LPJ_T0035140.1 MGP_LPJ_G0019798.1 mouse_genomes_project 12 81360218 81535819 + MGP_LPJ_P0035140 Smoc1 protein_coding protein_coding MGP_LPJ_T0009836.1 MGP_LPJ_G0007954.1 mouse_genomes_project 12 104174415 104174508 - Mir1936 miRNA miRNA MGP_LPJ_T0035174.1 MGP_LPJ_G0019809.1 mouse_genomes_project 12 82271482 82440671 + MGP_LPJ_P0035174 Pcnx protein_coding protein_coding MGP_LPJ_T0035175.1 MGP_LPJ_G0019809.1 mouse_genomes_project 12 82271824 82440673 + MGP_LPJ_P0035175 Pcnx protein_coding unknown_likely_coding MGP_LPJ_T0035436.1 MGP_LPJ_G0019880.1 mouse_genomes_project 12 87876285 87919163 - MGP_LPJ_P0035436 Pomt2 protein_coding protein_coding MGP_LPJ_T0034680.1 MGP_LPJ_G0019615.1 mouse_genomes_project 12 45332557 45453062 - MGP_LPJ_P0034680 Nova1 protein_coding protein_coding MGP_LPJ_T0034817.1 MGP_LPJ_G0019672.1 mouse_genomes_project 12 58439864 58460344 - MGP_LPJ_P0034817 Fbxo33 protein_coding protein_coding MGP_LPJ_T0034818.1 MGP_LPJ_G0019672.1 mouse_genomes_project 12 58439866 58443647 - MGP_LPJ_P0034818 Fbxo33 protein_coding protein_coding MGP_LPJ_T0034819.1 MGP_LPJ_G0019672.1 mouse_genomes_project 12 58439867 58444900 - Fbxo33 protein_coding retained_intron MGP_LPJ_T0034820.1 MGP_LPJ_G0019672.1 mouse_genomes_project 12 58443762 58459420 - MGP_LPJ_P0034820 Fbxo33 protein_coding protein_coding MGP_LPJ_T0034280.1 MGP_LPJ_G0019469.1 mouse_genomes_project 12 1118496 1125499 + MGP_LPJ_P0034280 Ptrhd1 protein_coding protein_coding MGP_LPJ_T0034609.1 MGP_LPJ_G0019593.1 mouse_genomes_project 12 34461346 34507181 + MGP_LPJ_P0034609 Ankmy2 protein_coding protein_coding MGP_LPJ_T0035565.1 MGP_LPJ_G0019915.1 mouse_genomes_project 12 101163055 101216144 + Tdp1 protein_coding retained_intron MGP_LPJ_T0035566.1 MGP_LPJ_G0019915.1 mouse_genomes_project 12 101163069 101166324 + Tdp1 protein_coding processed_transcript MGP_LPJ_T0035567.1 MGP_LPJ_G0019915.1 mouse_genomes_project 12 101163072 101236711 + MGP_LPJ_P0035567 Tdp1 protein_coding protein_coding MGP_LPJ_T0035568.1 MGP_LPJ_G0019915.1 mouse_genomes_project 12 101165022 101169754 + MGP_LPJ_P0035568 Tdp1 protein_coding protein_coding MGP_LPJ_T0035569.1 MGP_LPJ_G0019915.1 mouse_genomes_project 12 101169588 101236706 + MGP_LPJ_P0035569 Tdp1 protein_coding protein_coding MGP_LPJ_T0035570.1 MGP_LPJ_G0019915.1 mouse_genomes_project 12 101190072 101191004 + Tdp1 protein_coding retained_intron MGP_LPJ_T0035571.1 MGP_LPJ_G0019915.1 mouse_genomes_project 12 101192430 101236711 + Tdp1 protein_coding retained_intron MGP_LPJ_T0009855.1 MGP_LPJ_G0007973.1 mouse_genomes_project 12 111649414 111649538 + Mir433 miRNA miRNA MGP_LPJ_T0000893.1 MGP_LPJ_G0000822.1 mouse_genomes_project 12 60191607 60202513 + TEC TEC MGP_LPJ_T0000140.1 MGP_LPJ_G0000102.1 mouse_genomes_project 12 118874472 118874873 - MGP_LPJ_P0000140 IG_V_gene IG_V_gene MGP_LPJ_T0000006.1 MGP_LPJ_G0000004.1 mouse_genomes_project 12 115617960 115620035 - MGP_LPJ_P0000006 Ighe IG_C_gene IG_C_gene MGP_LPJ_T0100245.1 MGP_LPJ_G0038508.1 mouse_genomes_project 12 111718797 111718869 + Gm26922 snoRNA snoRNA MGP_LPJ_T0009922.1 MGP_LPJ_G0008040.1 mouse_genomes_project 12 118340233 118340299 - Mir6388 miRNA miRNA MGP_LPJ_T0034600.1 MGP_LPJ_G0019588.1 mouse_genomes_project 12 34217461 34241915 + MGP_LPJ_P0034600 Agr3 protein_coding protein_coding MGP_LPJ_T0034601.1 MGP_LPJ_G0019588.1 mouse_genomes_project 12 34217463 34220250 + MGP_LPJ_P0034601 Agr3 protein_coding protein_coding MGP_LPJ_T0098401.1 MGP_LPJ_G0036682.1 mouse_genomes_project 12 29933037 29933172 + Gm25913 scaRNA scaRNA MGP_LPJ_T0100200.1 MGP_LPJ_G0038463.1 mouse_genomes_project 12 29062124 29062257 + Gm25408 snoRNA snoRNA MGP_LPJ_T0034597.1 MGP_LPJ_G0019587.1 mouse_genomes_project 12 33777885 33816155 - MGP_LPJ_P0034597 Ahr protein_coding protein_coding MGP_LPJ_T0034598.1 MGP_LPJ_G0019587.1 mouse_genomes_project 12 33784776 33815738 - MGP_LPJ_P0034598 Ahr protein_coding nonsense_mediated_decay MGP_LPJ_T0034599.1 MGP_LPJ_G0019587.1 mouse_genomes_project 12 33794330 33805275 - Ahr protein_coding retained_intron MGP_LPJ_T0034740.1 MGP_LPJ_G0019646.1 mouse_genomes_project 12 54159971 54175122 + MGP_LPJ_P0034740 protein_coding protein_coding MGP_LPJ_T0003412.1 MGP_LPJ_G0003134.1 mouse_genomes_project 12 55789913 55792968 - Gm15524 antisense antisense MGP_LPJ_T0034285.1 MGP_LPJ_G0019473.1 mouse_genomes_project 12 1614832 1615357 - MGP_LPJ_P0034285 Gm17541 protein_coding protein_coding MGP_LPJ_T0035292.1 MGP_LPJ_G0019836.1 mouse_genomes_project 12 84955662 84991907 - MGP_LPJ_P0035292 Entpd5 protein_coding protein_coding MGP_LPJ_T0035293.1 MGP_LPJ_G0019836.1 mouse_genomes_project 12 84955662 84991907 - MGP_LPJ_P0035293 Entpd5 protein_coding protein_coding MGP_LPJ_T0035294.1 MGP_LPJ_G0019836.1 mouse_genomes_project 12 84955680 84995453 - MGP_LPJ_P0035294 Entpd5 protein_coding protein_coding MGP_LPJ_T0035295.1 MGP_LPJ_G0019836.1 mouse_genomes_project 12 84955683 84995438 - MGP_LPJ_P0035295 Entpd5 protein_coding protein_coding MGP_LPJ_T0035296.1 MGP_LPJ_G0019836.1 mouse_genomes_project 12 84958482 84986112 - MGP_LPJ_P0035296 Entpd5 protein_coding protein_coding MGP_LPJ_T0035297.1 MGP_LPJ_G0019836.1 mouse_genomes_project 12 84958814 84986063 - MGP_LPJ_P0035297 Entpd5 protein_coding protein_coding MGP_LPJ_T0035298.1 MGP_LPJ_G0019836.1 mouse_genomes_project 12 84962200 84969056 - Entpd5 protein_coding retained_intron MGP_LPJ_T0035299.1 MGP_LPJ_G0019836.1 mouse_genomes_project 12 84988590 84995408 - Entpd5 protein_coding processed_transcript MGP_LPJ_T0003443.1 MGP_LPJ_G0003161.1 mouse_genomes_project 12 120165947 120281138 - Gm5441 antisense antisense MGP_LPJ_T0003444.1 MGP_LPJ_G0003161.1 mouse_genomes_project 12 120214581 120281148 - Gm5441 antisense antisense MGP_LPJ_T0035053.1 MGP_LPJ_G0019758.1 mouse_genomes_project 12 76456773 76484605 + MGP_LPJ_P0035053 Zbtb1 protein_coding protein_coding MGP_LPJ_T0098998.1 MGP_LPJ_G0037261.1 mouse_genomes_project 12 87383431 87383538 + Gm22004 snRNA snRNA MGP_LPJ_T0035547.1 MGP_LPJ_G0019911.1 mouse_genomes_project 12 100018582 100142771 - MGP_LPJ_P0035547 Eml5 protein_coding protein_coding MGP_LPJ_T0035548.1 MGP_LPJ_G0019911.1 mouse_genomes_project 12 100027417 100142315 - MGP_LPJ_P0035548 Eml5 protein_coding unknown_likely_coding MGP_LPJ_T0035307.1 MGP_LPJ_G0019841.1 mouse_genomes_project 12 85168866 85197781 + MGP_LPJ_P0035307 Vsx2 protein_coding protein_coding MGP_LPJ_T0035308.1 MGP_LPJ_G0019841.1 mouse_genomes_project 12 85168944 85197781 + MGP_LPJ_P0035308 Vsx2 protein_coding protein_coding MGP_LPJ_T0000898.1 MGP_LPJ_G0000827.1 mouse_genomes_project 12 85734373 85735943 - TEC TEC MGP_LPJ_T0035996.1 MGP_LPJ_G0020069.1 mouse_genomes_project 12 115307592 115311220 + MGP_LPJ_P0035996 9230104M06Rik protein_coding protein_coding MGP_LPJ_T0035252.1 MGP_LPJ_G0019827.1 mouse_genomes_project 12 84627894 84635532 + MGP_LPJ_P0035252 Acot5 protein_coding protein_coding MGP_LPJ_T0035253.1 MGP_LPJ_G0019827.1 mouse_genomes_project 12 84627894 84635531 + MGP_LPJ_P0035253 Acot5 protein_coding protein_coding MGP_LPJ_T0011345.1 MGP_LPJ_G0009463.1 mouse_genomes_project 12 69618731 69619041 + Gm22058 misc_RNA misc_RNA MGP_LPJ_T0006460.1 MGP_LPJ_G0005383.1 mouse_genomes_project 12 88112898 88115921 + Gm26764 lincRNA lincRNA MGP_LPJ_T0035711.1 MGP_LPJ_G0019965.1 mouse_genomes_project 12 105570428 105580192 - MGP_LPJ_P0035711 Serpina11 protein_coding protein_coding MGP_LPJ_T0035712.1 MGP_LPJ_G0019965.1 mouse_genomes_project 12 105570440 105580162 - MGP_LPJ_P0035712 Serpina11 protein_coding protein_coding MGP_LPJ_T0035713.1 MGP_LPJ_G0019965.1 mouse_genomes_project 12 105574863 105580154 - MGP_LPJ_P0035713 Serpina11 protein_coding protein_coding MGP_LPJ_T0035714.1 MGP_LPJ_G0019965.1 mouse_genomes_project 12 105574949 105580152 - MGP_LPJ_P0035714 Serpina11 protein_coding protein_coding MGP_LPJ_T0035715.1 MGP_LPJ_G0019965.1 mouse_genomes_project 12 105576088 105580176 - Serpina11 protein_coding processed_transcript MGP_LPJ_T0034336.1 MGP_LPJ_G0019491.1 mouse_genomes_project 12 5888695 5912875 + MGP_LPJ_P0034336 Sdc1 protein_coding protein_coding MGP_LPJ_T0034337.1 MGP_LPJ_G0019491.1 mouse_genomes_project 12 5888696 5907247 + Sdc1 protein_coding retained_intron MGP_LPJ_T0034338.1 MGP_LPJ_G0019491.1 mouse_genomes_project 12 5888785 5912222 + MGP_LPJ_P0034338 Sdc1 protein_coding protein_coding MGP_LPJ_T0034339.1 MGP_LPJ_G0019491.1 mouse_genomes_project 12 5889114 5911322 + MGP_LPJ_P0034339 Sdc1 protein_coding protein_coding MGP_LPJ_T0034340.1 MGP_LPJ_G0019491.1 mouse_genomes_project 12 5889175 5909888 + Sdc1 protein_coding processed_transcript MGP_LPJ_T0034440.1 MGP_LPJ_G0019529.1 mouse_genomes_project 12 19049499 19077574 - MGP_LPJ_P0034440 Ywhaq protein_coding protein_coding MGP_LPJ_T0034441.1 MGP_LPJ_G0019529.1 mouse_genomes_project 12 19054757 19079338 - Ywhaq protein_coding processed_transcript MGP_LPJ_T0034442.1 MGP_LPJ_G0019529.1 mouse_genomes_project 12 19056163 19058618 - Ywhaq protein_coding retained_intron MGP_LPJ_T0035277.1 MGP_LPJ_G0019834.1 mouse_genomes_project 12 84926745 84943645 - MGP_LPJ_P0035277 Fam161b protein_coding protein_coding MGP_LPJ_T0035278.1 MGP_LPJ_G0019834.1 mouse_genomes_project 12 84926753 84943633 - MGP_LPJ_P0035278 Fam161b protein_coding protein_coding MGP_LPJ_T0035279.1 MGP_LPJ_G0019834.1 mouse_genomes_project 12 84927928 84943604 - Fam161b protein_coding retained_intron MGP_LPJ_T0035280.1 MGP_LPJ_G0019834.1 mouse_genomes_project 12 84929795 84936292 - Fam161b protein_coding retained_intron MGP_LPJ_T0034686.1 MGP_LPJ_G0019618.1 mouse_genomes_project 12 48135964 48136525 + MGP_LPJ_P0034686 Gm9804 protein_coding protein_coding MGP_LPJ_T0017249.1 MGP_LPJ_G0015149.1 mouse_genomes_project 12 100530506 100534583 - Gm20682 processed_transcript processed_transcript MGP_LPJ_T0100191.1 MGP_LPJ_G0038454.1 mouse_genomes_project 12 6823984 6824112 - Gm23979 snoRNA snoRNA MGP_LPJ_T0009912.1 MGP_LPJ_G0008030.1 mouse_genomes_project 12 114366523 114366608 + Mir3073a miRNA miRNA MGP_LPJ_T0034998.1 MGP_LPJ_G0019739.1 mouse_genomes_project 12 73461202 73464484 - MGP_LPJ_P0034998 Tmem30b protein_coding protein_coding MGP_LPJ_T0034210.1 MGP_LPJ_G0019459.1 mouse_genomes_project 12 175846 222031 + MGP_LPJ_P0034210 Kif3c protein_coding protein_coding MGP_LPJ_T0035300.1 MGP_LPJ_G0019837.1 mouse_genomes_project 12 84995494 85022956 + MGP_LPJ_P0035300 Bbof1 protein_coding protein_coding MGP_LPJ_T0035301.1 MGP_LPJ_G0019837.1 mouse_genomes_project 12 85002577 85017597 + MGP_LPJ_P0035301 Bbof1 protein_coding protein_coding MGP_LPJ_T0035303.1 MGP_LPJ_G0019837.1 mouse_genomes_project 12 85009162 85019556 + MGP_LPJ_P0035303 Bbof1 protein_coding nonsense_mediated_decay MGP_LPJ_T0006455.1 MGP_LPJ_G0005378.1 mouse_genomes_project 12 84594061 84610777 - 4732463B04Rik lincRNA lincRNA MGP_LPJ_T0000279.1 MGP_LPJ_G0000217.1 mouse_genomes_project 12 116765711 116765987 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0100251.1 MGP_LPJ_G0038514.1 mouse_genomes_project 12 111744951 111745026 + Gm23736 snoRNA snoRNA MGP_LPJ_T0035600.1 MGP_LPJ_G0019924.1 mouse_genomes_project 12 102257662 102374923 - MGP_LPJ_P0035600 Ccdc88c protein_coding protein_coding MGP_LPJ_T0035601.1 MGP_LPJ_G0019924.1 mouse_genomes_project 12 102257662 102374923 - MGP_LPJ_P0035601 Ccdc88c protein_coding protein_coding MGP_LPJ_T0035363.1 MGP_LPJ_G0019860.1 mouse_genomes_project 12 85945028 85985995 - MGP_LPJ_P0035363 Nek9 protein_coding protein_coding MGP_LPJ_T0098965.1 MGP_LPJ_G0037228.1 mouse_genomes_project 12 12316525 12316629 + Gm26449 snRNA snRNA MGP_LPJ_T0034615.1 MGP_LPJ_G0019597.1 mouse_genomes_project 12 34696804 35019449 + MGP_LPJ_P0034615 Ispd protein_coding protein_coding MGP_LPJ_T0009919.1 MGP_LPJ_G0008037.1 mouse_genomes_project 12 115780957 115781022 - Gm22175 miRNA miRNA MGP_LPJ_T0100216.1 MGP_LPJ_G0038479.1 mouse_genomes_project 12 58923303 58923434 - Gm24377 snoRNA snoRNA MGP_LPJ_T0012800.1 MGP_LPJ_G0010891.1 mouse_genomes_project 12 56791595 56792033 - processed_pseudogene processed_pseudogene MGP_LPJ_T0036015.1 MGP_LPJ_G0020074.1 mouse_genomes_project 12 115462698 115470253 + Crip1 protein_coding processed_transcript MGP_LPJ_T0036016.1 MGP_LPJ_G0020074.1 mouse_genomes_project 12 115465082 115470220 + MGP_LPJ_P0036016 Crip1 protein_coding protein_coding MGP_LPJ_T0036017.1 MGP_LPJ_G0020074.1 mouse_genomes_project 12 115468385 115470251 + MGP_LPJ_P0036017 Crip1 protein_coding protein_coding MGP_LPJ_T0036018.1 MGP_LPJ_G0020074.1 mouse_genomes_project 12 115468426 115470253 + MGP_LPJ_P0036018 Crip1 protein_coding protein_coding MGP_LPJ_T0036019.1 MGP_LPJ_G0020074.1 mouse_genomes_project 12 115468444 115470253 + Crip1 protein_coding retained_intron MGP_LPJ_T0036020.1 MGP_LPJ_G0020074.1 mouse_genomes_project 12 115468454 115470253 + Crip1 protein_coding retained_intron MGP_LPJ_T0100219.1 MGP_LPJ_G0038482.1 mouse_genomes_project 12 64555842 64555928 + Gm25970 snoRNA snoRNA MGP_LPJ_T0000901.1 MGP_LPJ_G0000830.1 mouse_genomes_project 12 104076536 104078694 - TEC TEC MGP_LPJ_T0000104.1 MGP_LPJ_G0000081.1 mouse_genomes_project 12 117092169 117092616 - MGP_LPJ_P0000104 Ighv10-1 IG_V_gene IG_V_gene MGP_LPJ_T0009905.1 MGP_LPJ_G0008023.1 mouse_genomes_project 12 111809723 111809802 + Mir409 miRNA miRNA MGP_LPJ_T0035011.1 MGP_LPJ_G0019747.1 mouse_genomes_project 12 75343124 75425113 + MGP_LPJ_P0035011 Rhoj protein_coding protein_coding MGP_LPJ_T0035012.1 MGP_LPJ_G0019747.1 mouse_genomes_project 12 75343124 75428691 + MGP_LPJ_P0035012 Rhoj protein_coding protein_coding MGP_LPJ_T0035013.1 MGP_LPJ_G0019747.1 mouse_genomes_project 12 75343124 75422974 + MGP_LPJ_P0035013 Rhoj protein_coding protein_coding MGP_LPJ_T0035014.1 MGP_LPJ_G0019747.1 mouse_genomes_project 12 75343475 75409686 + Rhoj protein_coding retained_intron MGP_LPJ_T0035015.1 MGP_LPJ_G0019747.1 mouse_genomes_project 12 75343683 75427370 + MGP_LPJ_P0035015 Rhoj protein_coding nonsense_mediated_decay MGP_LPJ_T0035018.1 MGP_LPJ_G0019750.1 mouse_genomes_project 12 75671220 75713515 - MGP_LPJ_P0035018 Wdr89 protein_coding protein_coding MGP_LPJ_T0035019.1 MGP_LPJ_G0019750.1 mouse_genomes_project 12 75671978 75713505 - MGP_LPJ_P0035019 Wdr89 protein_coding protein_coding MGP_LPJ_T0009818.1 MGP_LPJ_G0007936.1 mouse_genomes_project 12 72322233 72322348 - Gm44392 miRNA miRNA MGP_LPJ_T0035709.1 MGP_LPJ_G0019963.1 mouse_genomes_project 12 105331485 105344193 - MGP_LPJ_P0035709 protein_coding protein_coding MGP_LPJ_T0035610.1 MGP_LPJ_G0019929.1 mouse_genomes_project 12 103294819 103372989 - MGP_LPJ_P0035610 Trip11 protein_coding protein_coding MGP_LPJ_T0035611.1 MGP_LPJ_G0019929.1 mouse_genomes_project 12 103298315 103354101 - MGP_LPJ_P0035611 Trip11 protein_coding protein_coding MGP_LPJ_T0035612.1 MGP_LPJ_G0019929.1 mouse_genomes_project 12 103333630 103343416 - MGP_LPJ_P0035612 Trip11 protein_coding nonsense_mediated_decay MGP_LPJ_T0035613.1 MGP_LPJ_G0019929.1 mouse_genomes_project 12 103346028 103372845 - MGP_LPJ_P0035613 Trip11 protein_coding protein_coding MGP_LPJ_T0035614.1 MGP_LPJ_G0019929.1 mouse_genomes_project 12 103349360 103372862 - MGP_LPJ_P0035614 Trip11 protein_coding protein_coding MGP_LPJ_T0035615.1 MGP_LPJ_G0019929.1 mouse_genomes_project 12 103371997 103372877 - Trip11 protein_coding processed_transcript MGP_LPJ_T0009917.1 MGP_LPJ_G0008035.1 mouse_genomes_project 12 115226866 115226925 - Mir6941 miRNA miRNA MGP_LPJ_T0034586.1 MGP_LPJ_G0019579.1 mouse_genomes_project 12 31571344 31581101 + MGP_LPJ_P0034586 Twistnb protein_coding protein_coding MGP_LPJ_T0036064.1 MGP_LPJ_G0020091.1 mouse_genomes_project 12 122170672 122256652 - MGP_LPJ_P0036064 Itgb8 protein_coding protein_coding MGP_LPJ_T0036065.1 MGP_LPJ_G0020091.1 mouse_genomes_project 12 122200759 122256651 - Itgb8 protein_coding retained_intron MGP_LPJ_T0036066.1 MGP_LPJ_G0020091.1 mouse_genomes_project 12 122214314 122256620 - Itgb8 protein_coding retained_intron MGP_LPJ_T0017275.1 MGP_LPJ_G0015156.1 mouse_genomes_project 12 118993317 119028690 - Gm20658 processed_transcript processed_transcript MGP_LPJ_T0017276.1 MGP_LPJ_G0015156.1 mouse_genomes_project 12 118993340 119028817 - Gm20658 processed_transcript processed_transcript MGP_LPJ_T0000011.1 MGP_LPJ_G0000008.1 mouse_genomes_project 12 115713655 115715313 - MGP_LPJ_P0000011 Ighg3 IG_C_gene IG_C_gene MGP_LPJ_T0034465.1 MGP_LPJ_G0019537.1 mouse_genomes_project 12 22740485 22831026 + MGP_LPJ_P0034465 Kidins220 protein_coding protein_coding MGP_LPJ_T0034466.1 MGP_LPJ_G0019537.1 mouse_genomes_project 12 22740507 22834375 + MGP_LPJ_P0034466 Kidins220 protein_coding unknown_likely_coding MGP_LPJ_T0009886.1 MGP_LPJ_G0008004.1 mouse_genomes_project 12 111790323 111790443 - Gm25252 miRNA miRNA MGP_LPJ_T0000065.1 MGP_LPJ_G0000053.1 mouse_genomes_project 12 116363172 116363656 - MGP_LPJ_P0000065 Ighv5-15 IG_V_gene IG_V_gene MGP_LPJ_T0000066.1 MGP_LPJ_G0000053.1 mouse_genomes_project 12 116363172 116363648 - MGP_LPJ_P0000066 Ighv5-15 IG_V_gene IG_V_gene MGP_LPJ_T0012788.1 MGP_LPJ_G0010879.1 mouse_genomes_project 12 29028453 29030058 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000288.1 MGP_LPJ_G0000226.1 mouse_genomes_project 12 117177840 117178133 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0006461.1 MGP_LPJ_G0005384.1 mouse_genomes_project 12 88224830 88224963 - Gm29362 lincRNA lincRNA MGP_LPJ_T0035250.1 MGP_LPJ_G0019826.1 mouse_genomes_project 12 84607780 84616535 + MGP_LPJ_P0035250 Acot3 protein_coding protein_coding MGP_LPJ_T0035251.1 MGP_LPJ_G0019826.1 mouse_genomes_project 12 84607787 84616535 + MGP_LPJ_P0035251 Acot3 protein_coding protein_coding MGP_LPJ_T0098975.1 MGP_LPJ_G0037238.1 mouse_genomes_project 12 53702008 53702148 + Gm22513 snRNA snRNA MGP_LPJ_T0000902.1 MGP_LPJ_G0000831.1 mouse_genomes_project 12 105614432 105616966 - TEC TEC MGP_LPJ_T0009814.1 MGP_LPJ_G0007932.1 mouse_genomes_project 12 69004400 69004470 - miRNA miRNA MGP_LPJ_T0034595.1 MGP_LPJ_G0019586.1 mouse_genomes_project 12 33275880 33377576 + MGP_LPJ_P0034595 Snx13 protein_coding protein_coding MGP_LPJ_T0034596.1 MGP_LPJ_G0019586.1 mouse_genomes_project 12 33275891 33364817 + MGP_LPJ_P0034596 Snx13 protein_coding protein_coding MGP_LPJ_T0035062.1 MGP_LPJ_G0019764.1 mouse_genomes_project 12 76861321 76881737 + MGP_LPJ_P0035062 Churc1 protein_coding protein_coding MGP_LPJ_T0035065.1 MGP_LPJ_G0019764.1 mouse_genomes_project 12 76864245 76871681 + Churc1 protein_coding retained_intron MGP_LPJ_T0006525.1 MGP_LPJ_G0005421.1 mouse_genomes_project 12 115252773 115256923 - Gm26583 lincRNA lincRNA MGP_LPJ_T0006426.1 MGP_LPJ_G0005355.1 mouse_genomes_project 12 29548425 29549103 - Gm29541 lincRNA lincRNA MGP_LPJ_T0100213.1 MGP_LPJ_G0038476.1 mouse_genomes_project 12 55323190 55323320 - Gm25917 snoRNA snoRNA MGP_LPJ_T0035005.1 MGP_LPJ_G0019742.1 mouse_genomes_project 12 73922630 73943655 + MGP_LPJ_P0035005 Snapc1 protein_coding protein_coding MGP_LPJ_T0098984.1 MGP_LPJ_G0037247.1 mouse_genomes_project 12 63070092 63070199 + Gm24921 snRNA snRNA MGP_LPJ_T0006520.1 MGP_LPJ_G0005417.1 mouse_genomes_project 12 113013235 113016176 - Gm26912 lincRNA lincRNA MGP_LPJ_T0034821.1 MGP_LPJ_G0019673.1 mouse_genomes_project 12 60906092 60998735 + Lrfn5 protein_coding processed_transcript MGP_LPJ_T0034822.1 MGP_LPJ_G0019673.1 mouse_genomes_project 12 60906109 61055455 + Lrfn5 protein_coding processed_transcript MGP_LPJ_T0034823.1 MGP_LPJ_G0019673.1 mouse_genomes_project 12 60906866 61243855 + MGP_LPJ_P0034823 Lrfn5 protein_coding protein_coding MGP_LPJ_T0034824.1 MGP_LPJ_G0019673.1 mouse_genomes_project 12 60906866 61231414 + MGP_LPJ_P0034824 Lrfn5 protein_coding protein_coding MGP_LPJ_T0034825.1 MGP_LPJ_G0019673.1 mouse_genomes_project 12 61242194 61244269 + Lrfn5 protein_coding retained_intron MGP_LPJ_T0034459.1 MGP_LPJ_G0019535.1 mouse_genomes_project 12 22455896 22462819 + MGP_LPJ_P0034459 Rrm2 protein_coding protein_coding MGP_LPJ_T0034460.1 MGP_LPJ_G0019535.1 mouse_genomes_project 12 22456211 22457241 + Rrm2 protein_coding retained_intron MGP_LPJ_T0034461.1 MGP_LPJ_G0019535.1 mouse_genomes_project 12 22456407 22459297 + MGP_LPJ_P0034461 Rrm2 protein_coding protein_coding MGP_LPJ_T0034462.1 MGP_LPJ_G0019535.1 mouse_genomes_project 12 22456680 22462015 + MGP_LPJ_P0034462 Rrm2 protein_coding protein_coding MGP_LPJ_T0034777.1 MGP_LPJ_G0019662.1 mouse_genomes_project 12 56695190 56700674 - MGP_LPJ_P0034777 Foxa1 protein_coding protein_coding MGP_LPJ_T0035262.1 MGP_LPJ_G0019830.1 mouse_genomes_project 12 84714694 84717053 - MGP_LPJ_P0035262 Pnma1 protein_coding protein_coding MGP_LPJ_T0035652.1 MGP_LPJ_G0019946.1 mouse_genomes_project 12 104498791 104703388 + MGP_LPJ_P0035652 Unc79 protein_coding protein_coding MGP_LPJ_T0035653.1 MGP_LPJ_G0019946.1 mouse_genomes_project 12 104499510 104702992 + MGP_LPJ_P0035653 Unc79 protein_coding protein_coding MGP_LPJ_T0035654.1 MGP_LPJ_G0019946.1 mouse_genomes_project 12 104510175 104514566 + Unc79 protein_coding retained_intron MGP_LPJ_T0035655.1 MGP_LPJ_G0019946.1 mouse_genomes_project 12 104510946 104572848 + MGP_LPJ_P0035655 Unc79 protein_coding protein_coding MGP_LPJ_T0035656.1 MGP_LPJ_G0019946.1 mouse_genomes_project 12 104510997 104703377 + MGP_LPJ_P0035656 Unc79 protein_coding protein_coding MGP_LPJ_T0035657.1 MGP_LPJ_G0019946.1 mouse_genomes_project 12 104511054 104703444 + MGP_LPJ_P0035657 Unc79 protein_coding protein_coding MGP_LPJ_T0035658.1 MGP_LPJ_G0019946.1 mouse_genomes_project 12 104572498 104584159 + Unc79 protein_coding retained_intron MGP_LPJ_T0035659.1 MGP_LPJ_G0019946.1 mouse_genomes_project 12 104608412 104624586 + MGP_LPJ_P0035659 Unc79 protein_coding protein_coding MGP_LPJ_T0035660.1 MGP_LPJ_G0019946.1 mouse_genomes_project 12 104649144 104662641 + MGP_LPJ_P0035660 Unc79 protein_coding nonsense_mediated_decay MGP_LPJ_T0009851.1 MGP_LPJ_G0007969.1 mouse_genomes_project 12 111642076 111642170 + Mir665 miRNA miRNA MGP_LPJ_T0009868.1 MGP_LPJ_G0007986.1 mouse_genomes_project 12 111777207 111777270 + Mir299a miRNA miRNA MGP_LPJ_T0035584.1 MGP_LPJ_G0019921.1 mouse_genomes_project 12 101861357 102047709 - MGP_LPJ_P0035584 Rps6ka5 protein_coding unknown_likely_coding MGP_LPJ_T0035585.1 MGP_LPJ_G0019921.1 mouse_genomes_project 12 101862700 102047857 - MGP_LPJ_P0035585 Rps6ka5 protein_coding protein_coding MGP_LPJ_T0034291.1 MGP_LPJ_G0019478.1 mouse_genomes_project 12 1750394 1758815 - MGP_LPJ_P0034291 Fkbp1b protein_coding protein_coding MGP_LPJ_T0034570.1 MGP_LPJ_G0019576.1 mouse_genomes_project 12 31161555 31225891 - MGP_LPJ_P0034570 Cdhr3 protein_coding protein_coding MGP_LPJ_T0034405.1 MGP_LPJ_G0019520.1 mouse_genomes_project 12 14809384 14824673 + Pdia6 protein_coding retained_intron MGP_LPJ_T0034406.1 MGP_LPJ_G0019520.1 mouse_genomes_project 12 14809384 14827828 + MGP_LPJ_P0034406 Pdia6 protein_coding protein_coding MGP_LPJ_T0034407.1 MGP_LPJ_G0019520.1 mouse_genomes_project 12 14809447 14817079 + Pdia6 protein_coding processed_transcript MGP_LPJ_T0034408.1 MGP_LPJ_G0019520.1 mouse_genomes_project 12 14816692 14820500 + Pdia6 protein_coding retained_intron MGP_LPJ_T0034409.1 MGP_LPJ_G0019520.1 mouse_genomes_project 12 14820090 14821789 + Pdia6 protein_coding processed_transcript MGP_LPJ_T0035409.1 MGP_LPJ_G0019873.1 mouse_genomes_project 12 87409888 87424533 + MGP_LPJ_P0035409 Vash1 protein_coding protein_coding MGP_LPJ_T0006467.1 MGP_LPJ_G0005390.1 mouse_genomes_project 12 101513522 101514349 - Gm26723 lincRNA lincRNA MGP_LPJ_T0011350.1 MGP_LPJ_G0009468.1 mouse_genomes_project 12 87551785 87552087 + Gm25888 misc_RNA misc_RNA MGP_LPJ_T0011358.1 MGP_LPJ_G0009476.1 mouse_genomes_project 12 121768963 121769162 + Gm22537 misc_RNA misc_RNA MGP_LPJ_T0034571.1 MGP_LPJ_G0019577.1 mouse_genomes_project 12 31284725 31390292 + MGP_LPJ_P0034571 Atxn7l1 protein_coding protein_coding MGP_LPJ_T0034572.1 MGP_LPJ_G0019577.1 mouse_genomes_project 12 31284743 31390292 + MGP_LPJ_P0034572 Atxn7l1 protein_coding protein_coding MGP_LPJ_T0034573.1 MGP_LPJ_G0019577.1 mouse_genomes_project 12 31284786 31513195 + MGP_LPJ_P0034573 Atxn7l1 protein_coding protein_coding MGP_LPJ_T0034574.1 MGP_LPJ_G0019577.1 mouse_genomes_project 12 31284795 31515658 + MGP_LPJ_P0034574 Atxn7l1 protein_coding protein_coding MGP_LPJ_T0034575.1 MGP_LPJ_G0019577.1 mouse_genomes_project 12 31284806 31466142 + MGP_LPJ_P0034575 Atxn7l1 protein_coding nonsense_mediated_decay MGP_LPJ_T0034576.1 MGP_LPJ_G0019577.1 mouse_genomes_project 12 31284837 31468858 + Atxn7l1 protein_coding retained_intron MGP_LPJ_T0034577.1 MGP_LPJ_G0019577.1 mouse_genomes_project 12 31442710 31508272 + MGP_LPJ_P0034577 Atxn7l1 protein_coding protein_coding MGP_LPJ_T0034578.1 MGP_LPJ_G0019577.1 mouse_genomes_project 12 31454333 31484942 + MGP_LPJ_P0034578 Atxn7l1 protein_coding protein_coding MGP_LPJ_T0034579.1 MGP_LPJ_G0019577.1 mouse_genomes_project 12 31454345 31468858 + Atxn7l1 protein_coding retained_intron MGP_LPJ_T0034580.1 MGP_LPJ_G0019577.1 mouse_genomes_project 12 31454456 31466072 + MGP_LPJ_P0034580 Atxn7l1 protein_coding protein_coding MGP_LPJ_T0034581.1 MGP_LPJ_G0019577.1 mouse_genomes_project 12 31455453 31512356 + MGP_LPJ_P0034581 Atxn7l1 protein_coding protein_coding MGP_LPJ_T0034582.1 MGP_LPJ_G0019577.1 mouse_genomes_project 12 31455461 31466213 + Atxn7l1 protein_coding retained_intron MGP_LPJ_T0034583.1 MGP_LPJ_G0019577.1 mouse_genomes_project 12 31485305 31508277 + Atxn7l1 protein_coding retained_intron MGP_LPJ_T0034584.1 MGP_LPJ_G0019577.1 mouse_genomes_project 12 31507322 31513184 + MGP_LPJ_P0034584 Atxn7l1 protein_coding protein_coding MGP_LPJ_T0009840.1 MGP_LPJ_G0007958.1 mouse_genomes_project 12 110669115 110669214 + Mir342 miRNA miRNA MGP_LPJ_T0009825.1 MGP_LPJ_G0007943.1 mouse_genomes_project 12 86392863 86392924 - miRNA miRNA MGP_LPJ_T0000897.1 MGP_LPJ_G0000826.1 mouse_genomes_project 12 83591639 83592581 + TEC TEC MGP_LPJ_T0034366.1 MGP_LPJ_G0019506.1 mouse_genomes_project 12 10261219 10261603 + MGP_LPJ_P0034366 Rpl36-ps3 protein_coding protein_coding MGP_LPJ_T0034610.1 MGP_LPJ_G0019594.1 mouse_genomes_project 12 34517101 34527714 - MGP_LPJ_P0034610 Lrrc72 protein_coding protein_coding MGP_LPJ_T0034611.1 MGP_LPJ_G0019594.1 mouse_genomes_project 12 34518373 34564490 - MGP_LPJ_P0034611 Lrrc72 protein_coding protein_coding MGP_LPJ_T0034612.1 MGP_LPJ_G0019594.1 mouse_genomes_project 12 34521093 34527730 - Lrrc72 protein_coding retained_intron MGP_LPJ_T0009900.1 MGP_LPJ_G0008018.1 mouse_genomes_project 12 111804998 111805064 + Mir154 miRNA miRNA MGP_LPJ_T0036002.1 MGP_LPJ_G0020072.1 mouse_genomes_project 12 115412139 115453054 + Mta1 protein_coding processed_transcript MGP_LPJ_T0036003.1 MGP_LPJ_G0020072.1 mouse_genomes_project 12 115412139 115453591 + MGP_LPJ_P0036003 Mta1 protein_coding protein_coding MGP_LPJ_T0036004.1 MGP_LPJ_G0020072.1 mouse_genomes_project 12 115412139 115453558 + MGP_LPJ_P0036004 Mta1 protein_coding protein_coding MGP_LPJ_T0036005.1 MGP_LPJ_G0020072.1 mouse_genomes_project 12 115412139 115453590 + MGP_LPJ_P0036005 Mta1 protein_coding protein_coding MGP_LPJ_T0036006.1 MGP_LPJ_G0020072.1 mouse_genomes_project 12 115412139 115453591 + MGP_LPJ_P0036006 Mta1 protein_coding protein_coding MGP_LPJ_T0036007.1 MGP_LPJ_G0020072.1 mouse_genomes_project 12 115412139 115453591 + MGP_LPJ_P0036007 Mta1 protein_coding protein_coding MGP_LPJ_T0036008.1 MGP_LPJ_G0020072.1 mouse_genomes_project 12 115447716 115449765 + Mta1 protein_coding processed_transcript MGP_LPJ_T0036009.1 MGP_LPJ_G0020072.1 mouse_genomes_project 12 115447932 115449723 + Mta1 protein_coding processed_transcript MGP_LPJ_T0035815.1 MGP_LPJ_G0020008.1 mouse_genomes_project 12 110696918 110713486 - MGP_LPJ_P0035815 Degs2 protein_coding protein_coding MGP_LPJ_T0035816.1 MGP_LPJ_G0020008.1 mouse_genomes_project 12 110700348 110713486 - MGP_LPJ_P0035816 Degs2 protein_coding protein_coding MGP_LPJ_T0035935.1 MGP_LPJ_G0020044.1 mouse_genomes_project 12 114050769 114059757 - MGP_LPJ_P0035935 Xrcc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0035936.1 MGP_LPJ_G0020044.1 mouse_genomes_project 12 114050770 114062617 - MGP_LPJ_P0035936 Xrcc3 protein_coding protein_coding MGP_LPJ_T0035937.1 MGP_LPJ_G0020044.1 mouse_genomes_project 12 114052490 114059757 - Xrcc3 protein_coding processed_transcript MGP_LPJ_T0035938.1 MGP_LPJ_G0020044.1 mouse_genomes_project 12 114052556 114057538 - Xrcc3 protein_coding retained_intron MGP_LPJ_T0035939.1 MGP_LPJ_G0020044.1 mouse_genomes_project 12 114052651 114062649 - Xrcc3 protein_coding processed_transcript MGP_LPJ_T0035941.1 MGP_LPJ_G0020044.1 mouse_genomes_project 12 114057321 114059777 - Xrcc3 protein_coding processed_transcript MGP_LPJ_T0035942.1 MGP_LPJ_G0020044.1 mouse_genomes_project 12 114057456 114062628 - Xrcc3 protein_coding processed_transcript MGP_LPJ_T0035943.1 MGP_LPJ_G0020044.1 mouse_genomes_project 12 114059059 114059777 - Xrcc3 protein_coding processed_transcript MGP_LPJ_T0098968.1 MGP_LPJ_G0037231.1 mouse_genomes_project 12 33702477 33702584 + Gm26071 snRNA snRNA MGP_LPJ_T0035693.1 MGP_LPJ_G0019956.1 mouse_genomes_project 12 105072149 105163538 + MGP_LPJ_P0035693 Ppp4r4 protein_coding protein_coding MGP_LPJ_T0035694.1 MGP_LPJ_G0019956.1 mouse_genomes_project 12 105073286 105162611 + MGP_LPJ_P0035694 Ppp4r4 protein_coding nonsense_mediated_decay MGP_LPJ_T0035695.1 MGP_LPJ_G0019956.1 mouse_genomes_project 12 105099992 105162773 + MGP_LPJ_P0035695 Ppp4r4 protein_coding protein_coding MGP_LPJ_T0035696.1 MGP_LPJ_G0019956.1 mouse_genomes_project 12 105125011 105135213 + MGP_LPJ_P0035696 Ppp4r4 protein_coding protein_coding MGP_LPJ_T0035697.1 MGP_LPJ_G0019956.1 mouse_genomes_project 12 105143060 105147807 + MGP_LPJ_P0035697 Ppp4r4 protein_coding protein_coding MGP_LPJ_T0035088.1 MGP_LPJ_G0019772.1 mouse_genomes_project 12 78885290 78928254 + MGP_LPJ_P0035088 Fam71d protein_coding protein_coding MGP_LPJ_T0100244.1 MGP_LPJ_G0038507.1 mouse_genomes_project 12 111717203 111717275 + Gm23508 snoRNA snoRNA MGP_LPJ_T0100232.1 MGP_LPJ_G0038495.1 mouse_genomes_project 12 103733348 103733564 - Gm25203 snoRNA snoRNA MGP_LPJ_T0098977.1 MGP_LPJ_G0037240.1 mouse_genomes_project 12 53720096 53720260 + Gm24305 snRNA snRNA MGP_LPJ_T0034371.1 MGP_LPJ_G0019509.1 mouse_genomes_project 12 10648602 10974580 + MGP_LPJ_P0034371 Nbas protein_coding unknown_likely_coding MGP_LPJ_T0034372.1 MGP_LPJ_G0019509.1 mouse_genomes_project 12 10648613 10974724 + MGP_LPJ_P0034372 Nbas protein_coding protein_coding MGP_LPJ_T0034613.1 MGP_LPJ_G0019595.1 mouse_genomes_project 12 34626340 34630624 + MGP_LPJ_P0034613 Sostdc1 protein_coding protein_coding MGP_LPJ_T0009823.1 MGP_LPJ_G0007941.1 mouse_genomes_project 12 81514138 81514222 + Mir3067 miRNA miRNA MGP_LPJ_T0009870.1 MGP_LPJ_G0007988.1 mouse_genomes_project 12 111778348 111778460 - Gm25750 miRNA miRNA MGP_LPJ_T0006468.1 MGP_LPJ_G0005391.1 mouse_genomes_project 12 102286321 102294454 + A630072L19Rik lincRNA lincRNA MGP_LPJ_T0009871.1 MGP_LPJ_G0007989.1 mouse_genomes_project 12 111778372 111778433 + Mir380 miRNA miRNA MGP_LPJ_T0000106.1 MGP_LPJ_G0000083.1 mouse_genomes_project 12 117105738 117106209 - MGP_LPJ_P0000106 Ighv1-7 IG_V_gene IG_V_gene MGP_LPJ_T0035111.1 MGP_LPJ_G0019785.1 mouse_genomes_project 12 79528221 79755737 + MGP_LPJ_P0035111 Rad51b protein_coding protein_coding MGP_LPJ_T0035112.1 MGP_LPJ_G0019785.1 mouse_genomes_project 12 79528221 79561117 + MGP_LPJ_P0035112 Rad51b protein_coding protein_coding MGP_LPJ_T0035531.1 MGP_LPJ_G0019905.1 mouse_genomes_project 12 99392407 99451461 - MGP_LPJ_P0035531 Galc protein_coding unknown_likely_coding MGP_LPJ_T0035532.1 MGP_LPJ_G0019905.1 mouse_genomes_project 12 99392414 99451639 - MGP_LPJ_P0035532 Galc protein_coding protein_coding MGP_LPJ_T0000899.1 MGP_LPJ_G0000828.1 mouse_genomes_project 12 86761469 86762076 + TEC TEC MGP_LPJ_T0099000.1 MGP_LPJ_G0037263.1 mouse_genomes_project 12 96457495 96457602 - Gm26055 snRNA snRNA MGP_LPJ_T0000058.1 MGP_LPJ_G0000047.1 mouse_genomes_project 12 116005513 116006000 - MGP_LPJ_P0000058 Ighv5-2 IG_V_gene IG_V_gene MGP_LPJ_T0000059.1 MGP_LPJ_G0000047.1 mouse_genomes_project 12 116005513 116006000 - MGP_LPJ_P0000059 Ighv5-2 IG_V_gene IG_V_gene MGP_LPJ_T0003401.1 MGP_LPJ_G0003125.1 mouse_genomes_project 12 720202 723154 - Dnmt3aos antisense antisense MGP_LPJ_T0034935.1 MGP_LPJ_G0019716.1 mouse_genomes_project 12 70876901 70888735 + MGP_LPJ_P0034935 Tomm20l protein_coding protein_coding MGP_LPJ_T0034661.1 MGP_LPJ_G0019609.1 mouse_genomes_project 12 39469745 40422100 + MGP_LPJ_P0034661 Immp2l protein_coding protein_coding MGP_LPJ_T0034662.1 MGP_LPJ_G0019609.1 mouse_genomes_project 12 39469781 39517523 + Immp2l protein_coding retained_intron MGP_LPJ_T0034663.1 MGP_LPJ_G0019609.1 mouse_genomes_project 12 39469782 39560478 + Immp2l protein_coding retained_intron MGP_LPJ_T0034664.1 MGP_LPJ_G0019609.1 mouse_genomes_project 12 39469984 40421754 + MGP_LPJ_P0034664 Immp2l protein_coding protein_coding MGP_LPJ_T0034665.1 MGP_LPJ_G0019609.1 mouse_genomes_project 12 39516949 39560464 + MGP_LPJ_P0034665 Immp2l protein_coding protein_coding MGP_LPJ_T0009904.1 MGP_LPJ_G0008022.1 mouse_genomes_project 12 111809723 111809803 - Gm24321 miRNA miRNA MGP_LPJ_T0017254.1 MGP_LPJ_G0015153.1 mouse_genomes_project 12 105574969 105588836 - Gm28577 processed_transcript processed_transcript MGP_LPJ_T0034482.1 MGP_LPJ_G0019547.1 mouse_genomes_project 12 26574663 26584415 + MGP_LPJ_P0034482 Rnaseh1 protein_coding protein_coding MGP_LPJ_T0035967.1 MGP_LPJ_G0020056.1 mouse_genomes_project 12 114932337 114936662 + MGP_LPJ_P0035967 Siva1 protein_coding protein_coding MGP_LPJ_T0035968.1 MGP_LPJ_G0020056.1 mouse_genomes_project 12 114932337 114936662 + MGP_LPJ_P0035968 Siva1 protein_coding protein_coding MGP_LPJ_T0035586.1 MGP_LPJ_G0019922.1 mouse_genomes_project 12 102119080 102214686 + MGP_LPJ_P0035586 9030617O03Rik protein_coding protein_coding MGP_LPJ_T0035587.1 MGP_LPJ_G0019922.1 mouse_genomes_project 12 102119101 102214430 + MGP_LPJ_P0035587 9030617O03Rik protein_coding protein_coding MGP_LPJ_T0035588.1 MGP_LPJ_G0019922.1 mouse_genomes_project 12 102119109 102240140 + MGP_LPJ_P0035588 9030617O03Rik protein_coding protein_coding MGP_LPJ_T0035589.1 MGP_LPJ_G0019922.1 mouse_genomes_project 12 102119118 102214430 + MGP_LPJ_P0035589 9030617O03Rik protein_coding protein_coding MGP_LPJ_T0035590.1 MGP_LPJ_G0019922.1 mouse_genomes_project 12 102119159 102178556 + MGP_LPJ_P0035590 9030617O03Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0035591.1 MGP_LPJ_G0019922.1 mouse_genomes_project 12 102126024 102214424 + MGP_LPJ_P0035591 9030617O03Rik protein_coding protein_coding MGP_LPJ_T0035592.1 MGP_LPJ_G0019922.1 mouse_genomes_project 12 102207003 102217459 + MGP_LPJ_P0035592 9030617O03Rik protein_coding protein_coding MGP_LPJ_T0035597.1 MGP_LPJ_G0019922.1 mouse_genomes_project 12 102227593 102238649 + 9030617O03Rik protein_coding processed_transcript MGP_LPJ_T0035529.1 MGP_LPJ_G0019904.1 mouse_genomes_project 12 96785134 96883736 + MGP_LPJ_P0035529 Flrt2 protein_coding protein_coding MGP_LPJ_T0035530.1 MGP_LPJ_G0019904.1 mouse_genomes_project 12 96788321 96879628 + MGP_LPJ_P0035530 Flrt2 protein_coding protein_coding MGP_LPJ_T0034931.1 MGP_LPJ_G0019715.1 mouse_genomes_project 12 70777232 70863398 + MGP_LPJ_P0034931 Arid4a protein_coding protein_coding MGP_LPJ_T0034932.1 MGP_LPJ_G0019715.1 mouse_genomes_project 12 70777271 70840571 + Arid4a protein_coding processed_transcript MGP_LPJ_T0034933.1 MGP_LPJ_G0019715.1 mouse_genomes_project 12 70777950 70812644 + MGP_LPJ_P0034933 Arid4a protein_coding protein_coding MGP_LPJ_T0034934.1 MGP_LPJ_G0019715.1 mouse_genomes_project 12 70813645 70848620 + MGP_LPJ_P0034934 Arid4a protein_coding protein_coding MGP_LPJ_T0034357.1 MGP_LPJ_G0019499.1 mouse_genomes_project 12 8324966 8386480 - MGP_LPJ_P0034357 Kcns3 protein_coding protein_coding MGP_LPJ_T0034358.1 MGP_LPJ_G0019499.1 mouse_genomes_project 12 8324966 8386011 - MGP_LPJ_P0034358 Kcns3 protein_coding protein_coding MGP_LPJ_T0035017.1 MGP_LPJ_G0019749.1 mouse_genomes_project 12 75480838 75633003 - MGP_LPJ_P0035017 Ppp2r5e protein_coding protein_coding MGP_LPJ_T0006430.1 MGP_LPJ_G0005358.1 mouse_genomes_project 12 31246887 31276028 + Gm16267 lincRNA lincRNA MGP_LPJ_T0035535.1 MGP_LPJ_G0019908.1 mouse_genomes_project 12 99853898 99896488 + MGP_LPJ_P0035535 Spata7 protein_coding protein_coding MGP_LPJ_T0035536.1 MGP_LPJ_G0019908.1 mouse_genomes_project 12 99853903 99864546 + Spata7 protein_coding retained_intron MGP_LPJ_T0035537.1 MGP_LPJ_G0019908.1 mouse_genomes_project 12 99853908 99896488 + MGP_LPJ_P0035537 Spata7 protein_coding protein_coding MGP_LPJ_T0035538.1 MGP_LPJ_G0019908.1 mouse_genomes_project 12 99853931 99858573 + Spata7 protein_coding retained_intron MGP_LPJ_T0035539.1 MGP_LPJ_G0019908.1 mouse_genomes_project 12 99853938 99896485 + MGP_LPJ_P0035539 Spata7 protein_coding protein_coding MGP_LPJ_T0035540.1 MGP_LPJ_G0019908.1 mouse_genomes_project 12 99890322 99895951 + Spata7 protein_coding retained_intron MGP_LPJ_T0006482.1 MGP_LPJ_G0005401.1 mouse_genomes_project 12 108823472 108826559 - Gm16087 lincRNA lincRNA MGP_LPJ_T0006435.1 MGP_LPJ_G0005362.1 mouse_genomes_project 12 50741987 50743434 + Gm26517 lincRNA lincRNA MGP_LPJ_T0006465.1 MGP_LPJ_G0005388.1 mouse_genomes_project 12 100827107 100890825 + Gm26839 lincRNA lincRNA MGP_LPJ_T0035651.1 MGP_LPJ_G0019945.1 mouse_genomes_project 12 104399331 104400588 + MGP_LPJ_P0035651 Cox8c protein_coding protein_coding MGP_LPJ_T0000303.1 MGP_LPJ_G0000241.1 mouse_genomes_project 12 118304913 118305356 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0036036.1 MGP_LPJ_G0020080.1 mouse_genomes_project 12 118968285 119030141 + Vipr2 protein_coding retained_intron MGP_LPJ_T0036037.1 MGP_LPJ_G0020080.1 mouse_genomes_project 12 118968287 119036426 + MGP_LPJ_P0036037 Vipr2 protein_coding protein_coding MGP_LPJ_T0036038.1 MGP_LPJ_G0020080.1 mouse_genomes_project 12 118968319 118988931 + Vipr2 protein_coding processed_transcript MGP_LPJ_T0036039.1 MGP_LPJ_G0020080.1 mouse_genomes_project 12 118968325 118985319 + Vipr2 protein_coding processed_transcript MGP_LPJ_T0036040.1 MGP_LPJ_G0020080.1 mouse_genomes_project 12 118968332 119023496 + Vipr2 protein_coding processed_transcript MGP_LPJ_T0036041.1 MGP_LPJ_G0020080.1 mouse_genomes_project 12 119027515 119033910 + MGP_LPJ_P0036041 Vipr2 protein_coding protein_coding MGP_LPJ_T0035802.1 MGP_LPJ_G0020005.1 mouse_genomes_project 12 110316792 110349474 + MGP_LPJ_P0035802 Cyp46a1 protein_coding protein_coding MGP_LPJ_T0035106.1 MGP_LPJ_G0019783.1 mouse_genomes_project 12 79426090 79440158 + MGP_LPJ_P0035106 Rdh12 protein_coding protein_coding MGP_LPJ_T0035107.1 MGP_LPJ_G0019783.1 mouse_genomes_project 12 79426107 79440157 + MGP_LPJ_P0035107 Rdh12 protein_coding protein_coding MGP_LPJ_T0035108.1 MGP_LPJ_G0019783.1 mouse_genomes_project 12 79426123 79440157 + Rdh12 protein_coding retained_intron MGP_LPJ_T0035109.1 MGP_LPJ_G0019783.1 mouse_genomes_project 12 79427837 79429922 + MGP_LPJ_P0035109 Rdh12 protein_coding protein_coding MGP_LPJ_T0100198.1 MGP_LPJ_G0038461.1 mouse_genomes_project 12 25502513 25502638 + Gm24326 snoRNA snoRNA MGP_LPJ_T0000313.1 MGP_LPJ_G0000251.1 mouse_genomes_project 12 118874473 118874905 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0034981.1 MGP_LPJ_G0019733.1 mouse_genomes_project 12 72945605 72949099 - Six1 protein_coding processed_transcript MGP_LPJ_T0034982.1 MGP_LPJ_G0019733.1 mouse_genomes_project 12 72948110 72955506 - MGP_LPJ_P0034982 Six1 protein_coding protein_coding MGP_LPJ_T0034983.1 MGP_LPJ_G0019733.1 mouse_genomes_project 12 72949817 72963503 - Six1 protein_coding processed_transcript MGP_LPJ_T0034984.1 MGP_LPJ_G0019733.1 mouse_genomes_project 12 72950060 72953619 - Six1 protein_coding processed_transcript MGP_LPJ_T0006412.1 MGP_LPJ_G0005344.1 mouse_genomes_project 12 6000532 6004805 - 9930038B18Rik lincRNA lincRNA MGP_LPJ_T0035335.1 MGP_LPJ_G0019851.1 mouse_genomes_project 12 85620988 85701194 + MGP_LPJ_P0035335 Ylpm1 protein_coding protein_coding MGP_LPJ_T0035336.1 MGP_LPJ_G0019851.1 mouse_genomes_project 12 85621019 85701217 + MGP_LPJ_P0035336 Ylpm1 protein_coding protein_coding MGP_LPJ_T0035337.1 MGP_LPJ_G0019851.1 mouse_genomes_project 12 85621122 85701216 + MGP_LPJ_P0035337 Ylpm1 protein_coding protein_coding MGP_LPJ_T0035338.1 MGP_LPJ_G0019851.1 mouse_genomes_project 12 85640348 85701194 + MGP_LPJ_P0035338 Ylpm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0035339.1 MGP_LPJ_G0019851.1 mouse_genomes_project 12 85672593 85690038 + Ylpm1 protein_coding retained_intron MGP_LPJ_T0035340.1 MGP_LPJ_G0019851.1 mouse_genomes_project 12 85680391 85681323 + Ylpm1 protein_coding retained_intron MGP_LPJ_T0035341.1 MGP_LPJ_G0019851.1 mouse_genomes_project 12 85690661 85700951 + Ylpm1 protein_coding retained_intron MGP_LPJ_T0035342.1 MGP_LPJ_G0019851.1 mouse_genomes_project 12 85695380 85701117 + Ylpm1 protein_coding retained_intron MGP_LPJ_T0034898.1 MGP_LPJ_G0019706.1 mouse_genomes_project 12 69652705 69674889 - MGP_LPJ_P0034898 Sav1 protein_coding protein_coding MGP_LPJ_T0034714.1 MGP_LPJ_G0019635.1 mouse_genomes_project 12 52180495 53028611 + MGP_LPJ_P0034714 Npas3 protein_coding protein_coding MGP_LPJ_T0034715.1 MGP_LPJ_G0019635.1 mouse_genomes_project 12 52180495 53025520 + MGP_LPJ_P0034715 Npas3 protein_coding unknown_likely_coding MGP_LPJ_T0098402.1 MGP_LPJ_G0036683.1 mouse_genomes_project 12 80685273 80685412 - Scarna3b scaRNA scaRNA MGP_LPJ_T0034607.1 MGP_LPJ_G0019591.1 mouse_genomes_project 12 34393516 34394967 + MGP_LPJ_P0034607 Gm5434 protein_coding protein_coding MGP_LPJ_T0035370.1 MGP_LPJ_G0019864.1 mouse_genomes_project 12 86255693 86302125 + MGP_LPJ_P0035370 Jdp2 protein_coding protein_coding MGP_LPJ_T0035371.1 MGP_LPJ_G0019864.1 mouse_genomes_project 12 86256004 86302124 + MGP_LPJ_P0035371 Jdp2 protein_coding protein_coding MGP_LPJ_T0035372.1 MGP_LPJ_G0019864.1 mouse_genomes_project 12 86256606 86302125 + MGP_LPJ_P0035372 Jdp2 protein_coding protein_coding MGP_LPJ_T0098994.1 MGP_LPJ_G0037257.1 mouse_genomes_project 12 78947402 78947504 - Gm25225 snRNA snRNA MGP_LPJ_T0035860.1 MGP_LPJ_G0020021.1 mouse_genomes_project 12 112838603 112846861 - MGP_LPJ_P0035860 Hsp90aa1 protein_coding protein_coding MGP_LPJ_T0035861.1 MGP_LPJ_G0020021.1 mouse_genomes_project 12 112843640 112844273 - Hsp90aa1 protein_coding retained_intron MGP_LPJ_T0035862.1 MGP_LPJ_G0020021.1 mouse_genomes_project 12 112844155 112846138 - Hsp90aa1 protein_coding retained_intron MGP_LPJ_T0035863.1 MGP_LPJ_G0020021.1 mouse_genomes_project 12 112844609 112853190 - MGP_LPJ_P0035863 Hsp90aa1 protein_coding protein_coding MGP_LPJ_T0035864.1 MGP_LPJ_G0020021.1 mouse_genomes_project 12 112845141 112846724 - MGP_LPJ_P0035864 Hsp90aa1 protein_coding protein_coding MGP_LPJ_T0035865.1 MGP_LPJ_G0020021.1 mouse_genomes_project 12 112845157 112846417 - MGP_LPJ_P0035865 Hsp90aa1 protein_coding protein_coding MGP_LPJ_T0034857.1 MGP_LPJ_G0019688.1 mouse_genomes_project 12 68804942 68806198 - MGP_LPJ_P0034857 Rpl36al protein_coding protein_coding MGP_LPJ_T0034858.1 MGP_LPJ_G0019688.1 mouse_genomes_project 12 68804949 68806225 - MGP_LPJ_P0034858 Rpl36al protein_coding protein_coding MGP_LPJ_T0034859.1 MGP_LPJ_G0019688.1 mouse_genomes_project 12 68804952 68806295 - MGP_LPJ_P0034859 Rpl36al protein_coding protein_coding MGP_LPJ_T0000123.1 MGP_LPJ_G0000093.1 mouse_genomes_project 12 117723320 117723614 - MGP_LPJ_P0000123 Ighv8-4 IG_V_gene IG_V_gene MGP_LPJ_T0000124.1 MGP_LPJ_G0000093.1 mouse_genomes_project 12 117723320 117723754 - MGP_LPJ_P0000124 Ighv8-4 IG_V_gene IG_V_gene MGP_LPJ_T0035621.1 MGP_LPJ_G0019931.1 mouse_genomes_project 12 103438328 103471250 + MGP_LPJ_P0035621 Cpsf2 protein_coding protein_coding MGP_LPJ_T0100217.1 MGP_LPJ_G0038480.1 mouse_genomes_project 12 58931637 58931768 + Gm22673 snoRNA snoRNA MGP_LPJ_T0035400.1 MGP_LPJ_G0019870.1 mouse_genomes_project 12 86774846 86864045 + MGP_LPJ_P0035400 Ift43 protein_coding unknown_likely_coding MGP_LPJ_T0035401.1 MGP_LPJ_G0019870.1 mouse_genomes_project 12 86774855 86864038 + MGP_LPJ_P0035401 Ift43 protein_coding protein_coding MGP_LPJ_T0100234.1 MGP_LPJ_G0038497.1 mouse_genomes_project 12 106082460 106082588 - Gm24334 snoRNA snoRNA MGP_LPJ_T0000135.1 MGP_LPJ_G0000099.1 mouse_genomes_project 12 118588821 118589122 - MGP_LPJ_P0000135 IG_V_gene IG_V_gene MGP_LPJ_T0000136.1 MGP_LPJ_G0000099.1 mouse_genomes_project 12 118588825 118589255 - MGP_LPJ_P0000136 IG_V_gene IG_V_gene MGP_LPJ_T0009817.1 MGP_LPJ_G0007935.1 mouse_genomes_project 12 71965757 71965866 - Gm24466 miRNA miRNA MGP_LPJ_T0000278.1 MGP_LPJ_G0000216.1 mouse_genomes_project 12 116639782 116640077 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0034987.1 MGP_LPJ_G0019735.1 mouse_genomes_project 12 73037380 73192507 + MGP_LPJ_P0034987 Mnat1 protein_coding nonsense_mediated_decay MGP_LPJ_T0034988.1 MGP_LPJ_G0019735.1 mouse_genomes_project 12 73037380 73193644 + MGP_LPJ_P0034988 Mnat1 protein_coding protein_coding MGP_LPJ_T0034989.1 MGP_LPJ_G0019735.1 mouse_genomes_project 12 73037380 73152306 + MGP_LPJ_P0034989 Mnat1 protein_coding protein_coding MGP_LPJ_T0034990.1 MGP_LPJ_G0019735.1 mouse_genomes_project 12 73037500 73192466 + MGP_LPJ_P0034990 Mnat1 protein_coding unknown_likely_coding MGP_LPJ_T0036055.1 MGP_LPJ_G0020087.1 mouse_genomes_project 12 120850714 121188743 - MGP_LPJ_P0036055 Dnah11 protein_coding protein_coding MGP_LPJ_T0036056.1 MGP_LPJ_G0020087.1 mouse_genomes_project 12 120850714 121045234 - MGP_LPJ_P0036056 Dnah11 protein_coding nonsense_mediated_decay MGP_LPJ_T0036057.1 MGP_LPJ_G0020087.1 mouse_genomes_project 12 120875635 120888867 - Dnah11 protein_coding retained_intron MGP_LPJ_T0036058.1 MGP_LPJ_G0020087.1 mouse_genomes_project 12 120875651 120889093 - Dnah11 protein_coding processed_transcript MGP_LPJ_T0000257.1 MGP_LPJ_G0000195.1 mouse_genomes_project 12 115999515 115999991 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0035710.1 MGP_LPJ_G0019964.1 mouse_genomes_project 12 105424883 105437526 - MGP_LPJ_P0035710 protein_coding protein_coding MGP_LPJ_T0011356.1 MGP_LPJ_G0009474.1 mouse_genomes_project 12 111598053 111598150 + Gm27335 misc_RNA misc_RNA MGP_LPJ_T0034672.1 MGP_LPJ_G0019613.1 mouse_genomes_project 12 42866510 43147053 + MGP_LPJ_P0034672 Nrcam protein_coding protein_coding MGP_LPJ_T0034673.1 MGP_LPJ_G0019613.1 mouse_genomes_project 12 42866510 43147053 + MGP_LPJ_P0034673 Nrcam protein_coding protein_coding MGP_LPJ_T0034674.1 MGP_LPJ_G0019613.1 mouse_genomes_project 12 43066933 43145916 + MGP_LPJ_P0034674 Nrcam protein_coding unknown_likely_coding MGP_LPJ_T0035649.1 MGP_LPJ_G0019943.1 mouse_genomes_project 12 104256207 104276763 + MGP_LPJ_P0035649 Ubr7 protein_coding protein_coding MGP_LPJ_T0012820.1 MGP_LPJ_G0010911.1 mouse_genomes_project 12 87450301 87450760 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000301.1 MGP_LPJ_G0000239.1 mouse_genomes_project 12 117738544 117738838 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0035667.1 MGP_LPJ_G0019948.1 mouse_genomes_project 12 104836651 104842741 + MGP_LPJ_P0035667 Fam181a protein_coding protein_coding MGP_LPJ_T0035668.1 MGP_LPJ_G0019948.1 mouse_genomes_project 12 104840629 104841995 + MGP_LPJ_P0035668 Fam181a protein_coding protein_coding MGP_LPJ_T0035669.1 MGP_LPJ_G0019948.1 mouse_genomes_project 12 104840635 104842741 + MGP_LPJ_P0035669 Fam181a protein_coding protein_coding MGP_LPJ_T0035817.1 MGP_LPJ_G0020009.1 mouse_genomes_project 12 110812980 110837693 + MGP_LPJ_P0035817 Yy1 protein_coding protein_coding MGP_LPJ_T0035818.1 MGP_LPJ_G0020009.1 mouse_genomes_project 12 110827299 110836625 + Yy1 protein_coding retained_intron MGP_LPJ_T0000094.1 MGP_LPJ_G0000073.1 mouse_genomes_project 12 116934002 116934477 - MGP_LPJ_P0000094 Ighv3-8 IG_V_gene IG_V_gene MGP_LPJ_T0011357.1 MGP_LPJ_G0009475.1 mouse_genomes_project 12 111662491 111662589 + Gm27350 misc_RNA misc_RNA MGP_LPJ_T0009830.1 MGP_LPJ_G0007948.1 mouse_genomes_project 12 90305585 90305667 + Gm23989 miRNA miRNA MGP_LPJ_T0034758.1 MGP_LPJ_G0019657.1 mouse_genomes_project 12 55709690 55711575 - MGP_LPJ_P0034758 Nkx2-9 protein_coding protein_coding MGP_LPJ_T0012830.1 MGP_LPJ_G0010921.1 mouse_genomes_project 12 103101731 103102074 + processed_pseudogene processed_pseudogene MGP_LPJ_T0035801.1 MGP_LPJ_G0020004.1 mouse_genomes_project 12 110285227 110310716 + MGP_LPJ_P0035801 Hhipl1 protein_coding protein_coding MGP_LPJ_T0034261.1 MGP_LPJ_G0019464.1 mouse_genomes_project 12 823707 829373 + MGP_LPJ_P0034261 Pomc protein_coding protein_coding MGP_LPJ_T0000261.1 MGP_LPJ_G0000199.1 mouse_genomes_project 12 116029180 116029649 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0012850.1 MGP_LPJ_G0010941.1 mouse_genomes_project 12 118337325 118339120 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000023.1 MGP_LPJ_G0000017.1 mouse_genomes_project 12 115786322 115786333 - MGP_LPJ_P0000023 Ighd4-1 IG_D_gene IG_D_gene MGP_LPJ_T0035638.1 MGP_LPJ_G0019937.1 mouse_genomes_project 12 104055850 104195857 - MGP_LPJ_P0035638 Itpk1 protein_coding protein_coding MGP_LPJ_T0035639.1 MGP_LPJ_G0019937.1 mouse_genomes_project 12 104071565 104081361 - Itpk1 protein_coding processed_transcript MGP_LPJ_T0035640.1 MGP_LPJ_G0019937.1 mouse_genomes_project 12 104075198 104128877 - MGP_LPJ_P0035640 Itpk1 protein_coding protein_coding MGP_LPJ_T0035641.1 MGP_LPJ_G0019937.1 mouse_genomes_project 12 104110654 104195955 - MGP_LPJ_P0035641 Itpk1 protein_coding protein_coding MGP_LPJ_T0035997.1 MGP_LPJ_G0020070.1 mouse_genomes_project 12 115323508 115384752 + MGP_LPJ_P0035997 Pacs2 protein_coding protein_coding MGP_LPJ_T0000292.1 MGP_LPJ_G0000230.1 mouse_genomes_project 12 117353882 117354295 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0035993.1 MGP_LPJ_G0020067.1 mouse_genomes_project 12 115266102 115309915 - MGP_LPJ_P0035993 Brf1 protein_coding protein_coding MGP_LPJ_T0035323.1 MGP_LPJ_G0019848.1 mouse_genomes_project 12 85495426 85497790 + MGP_LPJ_P0035323 D030025P21Rik protein_coding protein_coding MGP_LPJ_T0034778.1 MGP_LPJ_G0019663.1 mouse_genomes_project 12 56720648 56779570 + MGP_LPJ_P0034778 protein_coding protein_coding MGP_LPJ_T0034779.1 MGP_LPJ_G0019663.1 mouse_genomes_project 12 56733581 56899029 + MGP_LPJ_P0034779 protein_coding protein_coding MGP_LPJ_T0034780.1 MGP_LPJ_G0019663.1 mouse_genomes_project 12 56809269 56811574 + MGP_LPJ_P0034780 protein_coding protein_coding MGP_LPJ_T0012852.1 MGP_LPJ_G0010943.1 mouse_genomes_project 12 118408045 118409028 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012814.1 MGP_LPJ_G0010905.1 mouse_genomes_project 12 80381532 80382427 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009812.1 MGP_LPJ_G0007930.1 mouse_genomes_project 12 68780649 68780728 + miRNA miRNA MGP_LPJ_T0035119.1 MGP_LPJ_G0019789.1 mouse_genomes_project 12 80756927 80795919 + MGP_LPJ_P0035119 Exd2 protein_coding protein_coding MGP_LPJ_T0012836.1 MGP_LPJ_G0010927.1 mouse_genomes_project 12 108349812 108351481 + processed_pseudogene processed_pseudogene MGP_LPJ_T0035744.1 MGP_LPJ_G0019983.1 mouse_genomes_project 12 106558718 106566665 + MGP_LPJ_P0035744 4930408O17Rik protein_coding protein_coding MGP_LPJ_T0006487.1 MGP_LPJ_G0005406.1 mouse_genomes_project 12 109642428 109656081 - 4930465M20Rik lincRNA lincRNA MGP_LPJ_T0006488.1 MGP_LPJ_G0005406.1 mouse_genomes_project 12 109648048 109656089 - 4930465M20Rik lincRNA lincRNA MGP_LPJ_T0035472.1 MGP_LPJ_G0019891.1 mouse_genomes_project 12 88237072 88259921 - MGP_LPJ_P0035472 Snw1 protein_coding protein_coding MGP_LPJ_T0012808.1 MGP_LPJ_G0010899.1 mouse_genomes_project 12 73918768 73919074 + processed_pseudogene processed_pseudogene MGP_LPJ_T0034833.1 MGP_LPJ_G0019680.1 mouse_genomes_project 12 64563169 64575833 - MGP_LPJ_P0034833 Fkbp3 protein_coding protein_coding MGP_LPJ_T0011352.1 MGP_LPJ_G0009470.1 mouse_genomes_project 12 97371808 97372105 - Gm26480 misc_RNA misc_RNA MGP_LPJ_T0034394.1 MGP_LPJ_G0019517.1 mouse_genomes_project 12 14515622 14527006 - Pqlc3 protein_coding retained_intron MGP_LPJ_T0034395.1 MGP_LPJ_G0019517.1 mouse_genomes_project 12 14515622 14527092 - MGP_LPJ_P0034395 Pqlc3 protein_coding protein_coding MGP_LPJ_T0034396.1 MGP_LPJ_G0019517.1 mouse_genomes_project 12 14519932 14526999 - MGP_LPJ_P0034396 Pqlc3 protein_coding protein_coding MGP_LPJ_T0034397.1 MGP_LPJ_G0019517.1 mouse_genomes_project 12 14520481 14527000 - Pqlc3 protein_coding processed_transcript MGP_LPJ_T0034398.1 MGP_LPJ_G0019517.1 mouse_genomes_project 12 14520626 14527090 - MGP_LPJ_P0034398 Pqlc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0034399.1 MGP_LPJ_G0019517.1 mouse_genomes_project 12 14522613 14527382 - Pqlc3 protein_coding processed_transcript MGP_LPJ_T0034400.1 MGP_LPJ_G0019517.1 mouse_genomes_project 12 14522613 14527382 - Pqlc3 protein_coding processed_transcript MGP_LPJ_T0035099.1 MGP_LPJ_G0019781.1 mouse_genomes_project 12 79370128 79386775 - MGP_LPJ_P0035099 Vti1b protein_coding protein_coding MGP_LPJ_T0035100.1 MGP_LPJ_G0019781.1 mouse_genomes_project 12 79370281 79386556 - MGP_LPJ_P0035100 Vti1b protein_coding nonsense_mediated_decay MGP_LPJ_T0035101.1 MGP_LPJ_G0019781.1 mouse_genomes_project 12 79370440 79379249 - MGP_LPJ_P0035101 Vti1b protein_coding protein_coding MGP_LPJ_T0035102.1 MGP_LPJ_G0019781.1 mouse_genomes_project 12 79370628 79380478 - MGP_LPJ_P0035102 Vti1b protein_coding nonsense_mediated_decay MGP_LPJ_T0035859.1 MGP_LPJ_G0020020.1 mouse_genomes_project 12 112812425 112830144 - MGP_LPJ_P0035859 1700001K19Rik protein_coding protein_coding MGP_LPJ_T0034307.1 MGP_LPJ_G0019483.1 mouse_genomes_project 12 2011447 2232588 - MGP_LPJ_P0034307 Klhl29 protein_coding protein_coding MGP_LPJ_T0000102.1 MGP_LPJ_G0000079.1 mouse_genomes_project 12 117064015 117064473 - MGP_LPJ_P0000102 Ighv6-7 IG_V_gene IG_V_gene MGP_LPJ_T0009801.1 MGP_LPJ_G0007919.1 mouse_genomes_project 12 31189932 31190092 + Gm22904 miRNA miRNA MGP_LPJ_T0035067.1 MGP_LPJ_G0019767.1 mouse_genomes_project 12 76898348 76923281 - MGP_LPJ_P0035067 Rab15 protein_coding protein_coding MGP_LPJ_T0035068.1 MGP_LPJ_G0019767.1 mouse_genomes_project 12 76900267 76901228 - Rab15 protein_coding retained_intron MGP_LPJ_T0035069.1 MGP_LPJ_G0019767.1 mouse_genomes_project 12 76900515 76905875 - MGP_LPJ_P0035069 Rab15 protein_coding protein_coding MGP_LPJ_T0035070.1 MGP_LPJ_G0019767.1 mouse_genomes_project 12 76900723 76923872 - MGP_LPJ_P0035070 Rab15 protein_coding protein_coding MGP_LPJ_T0035071.1 MGP_LPJ_G0019767.1 mouse_genomes_project 12 76900959 76920022 - MGP_LPJ_P0035071 Rab15 protein_coding protein_coding MGP_LPJ_T0035072.1 MGP_LPJ_G0019767.1 mouse_genomes_project 12 76903276 76923426 - Rab15 protein_coding retained_intron MGP_LPJ_T0034470.1 MGP_LPJ_G0019540.1 mouse_genomes_project 12 24244915 24258606 - MGP_LPJ_P0034470 Rsad2 protein_coding nonsense_mediated_decay MGP_LPJ_T0034471.1 MGP_LPJ_G0019540.1 mouse_genomes_project 12 24244915 24258627 - MGP_LPJ_P0034471 Rsad2 protein_coding protein_coding MGP_LPJ_T0034472.1 MGP_LPJ_G0019540.1 mouse_genomes_project 12 24252811 24257033 - Rsad2 protein_coding processed_transcript MGP_LPJ_T0034941.1 MGP_LPJ_G0019719.1 mouse_genomes_project 12 71091996 71102265 + MGP_LPJ_P0034941 Dact1 protein_coding protein_coding MGP_LPJ_T0034942.1 MGP_LPJ_G0019719.1 mouse_genomes_project 12 71092096 71101052 + MGP_LPJ_P0034942 Dact1 protein_coding protein_coding MGP_LPJ_T0035097.1 MGP_LPJ_G0019779.1 mouse_genomes_project 12 79296825 79305772 - MGP_LPJ_P0035097 Pigh protein_coding protein_coding MGP_LPJ_T0101801.1 MGP_LPJ_G0039839.1 mouse_genomes_project 12 47628768 47629008 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0000280.1 MGP_LPJ_G0000218.1 mouse_genomes_project 12 116874131 116874425 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0003400.1 MGP_LPJ_G0003124.1 mouse_genomes_project 12 609517 619060 - Dtnbos antisense antisense MGP_LPJ_T0034313.1 MGP_LPJ_G0019486.1 mouse_genomes_project 12 5377718 5381739 - MGP_LPJ_P0034313 Gdf7 protein_coding protein_coding MGP_LPJ_T0035832.1 MGP_LPJ_G0020014.1 mouse_genomes_project 12 111067478 111089026 - MGP_LPJ_P0035832 Begain protein_coding unknown_likely_coding MGP_LPJ_T0035833.1 MGP_LPJ_G0020014.1 mouse_genomes_project 12 111067488 111105154 - MGP_LPJ_P0035833 Begain protein_coding protein_coding MGP_LPJ_T0035834.1 MGP_LPJ_G0020014.1 mouse_genomes_project 12 111069911 111072389 - Begain protein_coding retained_intron MGP_LPJ_T0035835.1 MGP_LPJ_G0020014.1 mouse_genomes_project 12 111072953 111088883 - Begain protein_coding processed_transcript MGP_LPJ_T0009797.1 MGP_LPJ_G0007915.1 mouse_genomes_project 12 24212441 24212551 - Mir6538 miRNA miRNA MGP_LPJ_T0034754.1 MGP_LPJ_G0019654.1 mouse_genomes_project 12 54899709 54933067 + MGP_LPJ_P0034754 Brms1l protein_coding protein_coding MGP_LPJ_T0035549.1 MGP_LPJ_G0019912.1 mouse_genomes_project 12 100161617 100221616 + MGP_LPJ_P0035549 Ttc8 protein_coding protein_coding MGP_LPJ_T0035550.1 MGP_LPJ_G0019912.1 mouse_genomes_project 12 100161655 100221622 + MGP_LPJ_P0035550 Ttc8 protein_coding protein_coding MGP_LPJ_T0035551.1 MGP_LPJ_G0019912.1 mouse_genomes_project 12 100161862 100200417 + MGP_LPJ_P0035551 Ttc8 protein_coding protein_coding MGP_LPJ_T0035552.1 MGP_LPJ_G0019912.1 mouse_genomes_project 12 100177752 100209032 + Ttc8 protein_coding processed_transcript MGP_LPJ_T0035553.1 MGP_LPJ_G0019912.1 mouse_genomes_project 12 100212460 100220754 + Ttc8 protein_coding processed_transcript MGP_LPJ_T0035554.1 MGP_LPJ_G0019912.1 mouse_genomes_project 12 100212489 100218065 + Ttc8 protein_coding processed_transcript MGP_LPJ_T0012841.1 MGP_LPJ_G0010932.1 mouse_genomes_project 12 109524848 109525699 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012831.1 MGP_LPJ_G0010922.1 mouse_genomes_project 12 103326886 103327233 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009834.1 MGP_LPJ_G0007952.1 mouse_genomes_project 12 102367552 102367649 - Mir1190 miRNA miRNA MGP_LPJ_T0035452.1 MGP_LPJ_G0019888.1 mouse_genomes_project 12 88085579 88171504 - MGP_LPJ_P0035452 Sptlc2 protein_coding protein_coding MGP_LPJ_T0035453.1 MGP_LPJ_G0019888.1 mouse_genomes_project 12 88088459 88125409 - Sptlc2 protein_coding retained_intron MGP_LPJ_T0035454.1 MGP_LPJ_G0019888.1 mouse_genomes_project 12 88090028 88109025 - Sptlc2 protein_coding processed_transcript MGP_LPJ_T0035455.1 MGP_LPJ_G0019888.1 mouse_genomes_project 12 88128018 88131938 - Sptlc2 protein_coding retained_intron MGP_LPJ_T0035456.1 MGP_LPJ_G0019888.1 mouse_genomes_project 12 88128294 88171390 - Sptlc2 protein_coding processed_transcript MGP_LPJ_T0034608.1 MGP_LPJ_G0019592.1 mouse_genomes_project 12 34394983 34461048 - MGP_LPJ_P0034608 Bzw2 protein_coding protein_coding MGP_LPJ_T0012797.1 MGP_LPJ_G0010888.1 mouse_genomes_project 12 55447996 55448227 - processed_pseudogene processed_pseudogene MGP_LPJ_T0035508.1 MGP_LPJ_G0019900.1 mouse_genomes_project 12 92325230 92447779 + MGP_LPJ_P0035508 Tshr protein_coding protein_coding MGP_LPJ_T0035509.1 MGP_LPJ_G0019900.1 mouse_genomes_project 12 92325236 92429810 + MGP_LPJ_P0035509 Tshr protein_coding protein_coding MGP_LPJ_T0035510.1 MGP_LPJ_G0019900.1 mouse_genomes_project 12 92445335 92446826 + MGP_LPJ_P0035510 Tshr protein_coding protein_coding MGP_LPJ_T0009896.1 MGP_LPJ_G0008014.1 mouse_genomes_project 12 111800706 111800777 + Mir134 miRNA miRNA MGP_LPJ_T0000070.1 MGP_LPJ_G0000056.1 mouse_genomes_project 12 116412769 116413215 - MGP_LPJ_P0000070 Ighv2-9 IG_V_gene IG_V_gene MGP_LPJ_T0035849.1 MGP_LPJ_G0020018.1 mouse_genomes_project 12 112578607 112713733 + MGP_LPJ_P0035849 Ppp2r5c protein_coding unknown_likely_coding MGP_LPJ_T0035850.1 MGP_LPJ_G0020018.1 mouse_genomes_project 12 112624190 112725099 + MGP_LPJ_P0035850 Ppp2r5c protein_coding protein_coding MGP_LPJ_T0035851.1 MGP_LPJ_G0020018.1 mouse_genomes_project 12 112624190 112725099 + MGP_LPJ_P0035851 Ppp2r5c protein_coding protein_coding MGP_LPJ_T0098974.1 MGP_LPJ_G0037237.1 mouse_genomes_project 12 53206481 53206627 - Gm24692 snRNA snRNA MGP_LPJ_T0034667.1 MGP_LPJ_G0019611.1 mouse_genomes_project 12 42741577 42745749 - MGP_LPJ_P0034667 Dnajb9 protein_coding protein_coding MGP_LPJ_T0009916.1 MGP_LPJ_G0008034.1 mouse_genomes_project 12 115035928 115035998 + Mir6940 miRNA miRNA MGP_LPJ_T0034874.1 MGP_LPJ_G0019697.1 mouse_genomes_project 12 69015341 69019156 + MGP_LPJ_P0034874 Arf6 protein_coding protein_coding MGP_LPJ_T0035123.1 MGP_LPJ_G0019792.1 mouse_genomes_project 12 80954094 80996727 + MGP_LPJ_P0035123 Slc39a9 protein_coding protein_coding MGP_LPJ_T0100247.1 MGP_LPJ_G0038510.1 mouse_genomes_project 12 111721295 111721367 + Gm25357 snoRNA snoRNA MGP_LPJ_T0035474.1 MGP_LPJ_G0019893.1 mouse_genomes_project 12 88903822 88919771 - MGP_LPJ_P0035474 Gm2042 protein_coding protein_coding MGP_LPJ_T0035477.1 MGP_LPJ_G0019893.1 mouse_genomes_project 12 88904450 88919798 - MGP_LPJ_P0035477 Gm2042 protein_coding protein_coding MGP_LPJ_T0098130.1 MGP_LPJ_G0036411.1 mouse_genomes_project 12 2819692 2819807 + Gm23752 rRNA rRNA MGP_LPJ_T0012810.1 MGP_LPJ_G0010901.1 mouse_genomes_project 12 75671583 75671915 - processed_pseudogene processed_pseudogene MGP_LPJ_T0035124.1 MGP_LPJ_G0019793.1 mouse_genomes_project 12 81005859 81037418 + MGP_LPJ_P0035124 Plekhd1 protein_coding protein_coding MGP_LPJ_T0035125.1 MGP_LPJ_G0019793.1 mouse_genomes_project 12 81020056 81033889 + Plekhd1 protein_coding processed_transcript MGP_LPJ_T0035126.1 MGP_LPJ_G0019793.1 mouse_genomes_project 12 81033961 81035211 + MGP_LPJ_P0035126 Plekhd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0035127.1 MGP_LPJ_G0019793.1 mouse_genomes_project 12 81034935 81036114 + Plekhd1 protein_coding retained_intron MGP_LPJ_T0000029.1 MGP_LPJ_G0000022.1 mouse_genomes_project 12 115868865 115868894 - MGP_LPJ_P0000029 Ighd5-8 IG_D_gene IG_D_gene MGP_LPJ_T0009876.1 MGP_LPJ_G0007994.1 mouse_genomes_project 12 111781887 111781972 + Mir494 miRNA miRNA MGP_LPJ_T0000034.1 MGP_LPJ_G0000027.1 mouse_genomes_project 12 115844126 115844155 - IG_D_pseudogene IG_D_pseudogene MGP_LPJ_T0035417.1 MGP_LPJ_G0019876.1 mouse_genomes_project 12 87705903 87722571 + MGP_LPJ_P0035417 Cipc protein_coding nonsense_mediated_decay MGP_LPJ_T0035418.1 MGP_LPJ_G0019876.1 mouse_genomes_project 12 87705903 87721431 + MGP_LPJ_P0035418 Cipc protein_coding protein_coding MGP_LPJ_T0035419.1 MGP_LPJ_G0019876.1 mouse_genomes_project 12 87705959 87720731 + MGP_LPJ_P0035419 Cipc protein_coding nonsense_mediated_decay MGP_LPJ_T0035420.1 MGP_LPJ_G0019876.1 mouse_genomes_project 12 87706203 87724126 + MGP_LPJ_P0035420 Cipc protein_coding protein_coding MGP_LPJ_T0035421.1 MGP_LPJ_G0019876.1 mouse_genomes_project 12 87706256 87712026 + Cipc protein_coding retained_intron MGP_LPJ_T0035422.1 MGP_LPJ_G0019876.1 mouse_genomes_project 12 87706278 87719165 + MGP_LPJ_P0035422 Cipc protein_coding nonsense_mediated_decay MGP_LPJ_T0035423.1 MGP_LPJ_G0019876.1 mouse_genomes_project 12 87706314 87719164 + MGP_LPJ_P0035423 Cipc protein_coding nonsense_mediated_decay MGP_LPJ_T0035424.1 MGP_LPJ_G0019876.1 mouse_genomes_project 12 87706326 87719081 + MGP_LPJ_P0035424 Cipc protein_coding protein_coding MGP_LPJ_T0035425.1 MGP_LPJ_G0019876.1 mouse_genomes_project 12 87706350 87720647 + MGP_LPJ_P0035425 Cipc protein_coding nonsense_mediated_decay MGP_LPJ_T0035426.1 MGP_LPJ_G0019876.1 mouse_genomes_project 12 87711517 87721597 + MGP_LPJ_P0035426 Cipc protein_coding protein_coding MGP_LPJ_T0100222.1 MGP_LPJ_G0038485.1 mouse_genomes_project 12 65081268 65081400 + Gm22782 snoRNA snoRNA MGP_LPJ_T0098961.1 MGP_LPJ_G0037224.1 mouse_genomes_project 12 7049497 7049601 - Gm22845 snRNA snRNA MGP_LPJ_T0035918.1 MGP_LPJ_G0020041.1 mouse_genomes_project 12 113939060 113942827 - MGP_LPJ_P0035918 Bag5 protein_coding protein_coding MGP_LPJ_T0035919.1 MGP_LPJ_G0020041.1 mouse_genomes_project 12 113939476 113942497 - MGP_LPJ_P0035919 Bag5 protein_coding protein_coding MGP_LPJ_T0035920.1 MGP_LPJ_G0020041.1 mouse_genomes_project 12 113940781 113942523 - MGP_LPJ_P0035920 Bag5 protein_coding protein_coding MGP_LPJ_T0035921.1 MGP_LPJ_G0020041.1 mouse_genomes_project 12 113940847 113942523 - MGP_LPJ_P0035921 Bag5 protein_coding protein_coding MGP_LPJ_T0006437.1 MGP_LPJ_G0005364.1 mouse_genomes_project 12 58184781 58199130 + Gm17529 lincRNA lincRNA MGP_LPJ_T0035787.1 MGP_LPJ_G0019999.1 mouse_genomes_project 12 109388729 109389734 + MGP_LPJ_P0035787 3110018I06Rik protein_coding protein_coding MGP_LPJ_T0034766.1 MGP_LPJ_G0019660.1 mouse_genomes_project 12 56361988 56372093 + MGP_LPJ_P0034766 Prps1l3 protein_coding protein_coding MGP_LPJ_T0034955.1 MGP_LPJ_G0019724.1 mouse_genomes_project 12 71936512 72020991 - MGP_LPJ_P0034955 Ccdc175 protein_coding protein_coding MGP_LPJ_T0034827.1 MGP_LPJ_G0019675.1 mouse_genomes_project 12 63937160 63940762 - MGP_LPJ_P0034827 Fscb protein_coding protein_coding MGP_LPJ_T0000291.1 MGP_LPJ_G0000229.1 mouse_genomes_project 12 117300864 117301419 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0035533.1 MGP_LPJ_G0019906.1 mouse_genomes_project 12 99460844 99469284 + MGP_LPJ_P0035533 Gpr65 protein_coding protein_coding MGP_LPJ_T0009875.1 MGP_LPJ_G0007993.1 mouse_genomes_project 12 111780050 111780147 + Mir329 miRNA miRNA MGP_LPJ_T0003439.1 MGP_LPJ_G0003157.1 mouse_genomes_project 12 104862587 104874974 + Gm15523 antisense antisense MGP_LPJ_T0034622.1 MGP_LPJ_G0019600.1 mouse_genomes_project 12 36286414 37034305 + MGP_LPJ_P0034622 Dgkb protein_coding protein_coding MGP_LPJ_T0034623.1 MGP_LPJ_G0019600.1 mouse_genomes_project 12 36386067 37035141 + MGP_LPJ_P0034623 Dgkb protein_coding unknown_likely_coding MGP_LPJ_T0034266.1 MGP_LPJ_G0019467.1 mouse_genomes_project 12 1015526 1098417 + Adcy3 protein_coding retained_intron MGP_LPJ_T0034267.1 MGP_LPJ_G0019467.1 mouse_genomes_project 12 1015527 1098417 + MGP_LPJ_P0034267 Adcy3 protein_coding protein_coding MGP_LPJ_T0034268.1 MGP_LPJ_G0019467.1 mouse_genomes_project 12 1015820 1098417 + MGP_LPJ_P0034268 Adcy3 protein_coding protein_coding MGP_LPJ_T0034269.1 MGP_LPJ_G0019467.1 mouse_genomes_project 12 1015825 1098416 + MGP_LPJ_P0034269 Adcy3 protein_coding protein_coding MGP_LPJ_T0034270.1 MGP_LPJ_G0019467.1 mouse_genomes_project 12 1016576 1098416 + MGP_LPJ_P0034270 Adcy3 protein_coding protein_coding MGP_LPJ_T0034271.1 MGP_LPJ_G0019467.1 mouse_genomes_project 12 1045496 1069530 + Adcy3 protein_coding processed_transcript MGP_LPJ_T0034272.1 MGP_LPJ_G0019467.1 mouse_genomes_project 12 1079883 1081965 + Adcy3 protein_coding retained_intron MGP_LPJ_T0034275.1 MGP_LPJ_G0019467.1 mouse_genomes_project 12 1088325 1091336 + Adcy3 protein_coding retained_intron MGP_LPJ_T0009866.1 MGP_LPJ_G0007984.1 mouse_genomes_project 12 111775629 111775695 + Mir379 miRNA miRNA MGP_LPJ_T0009829.1 MGP_LPJ_G0007947.1 mouse_genomes_project 12 90165528 90165670 - Gm27313 miRNA miRNA MGP_LPJ_T0035380.1 MGP_LPJ_G0019868.1 mouse_genomes_project 12 86507396 86541482 + MGP_LPJ_P0035380 Ttll5 protein_coding protein_coding MGP_LPJ_T0035381.1 MGP_LPJ_G0019868.1 mouse_genomes_project 12 86507410 86577887 + MGP_LPJ_P0035381 Ttll5 protein_coding protein_coding MGP_LPJ_T0035382.1 MGP_LPJ_G0019868.1 mouse_genomes_project 12 86507444 86567555 + MGP_LPJ_P0035382 Ttll5 protein_coding protein_coding MGP_LPJ_T0035383.1 MGP_LPJ_G0019868.1 mouse_genomes_project 12 86507447 86745117 + MGP_LPJ_P0035383 Ttll5 protein_coding protein_coding MGP_LPJ_T0035384.1 MGP_LPJ_G0019868.1 mouse_genomes_project 12 86507705 86706281 + MGP_LPJ_P0035384 Ttll5 protein_coding nonsense_mediated_decay MGP_LPJ_T0035385.1 MGP_LPJ_G0019868.1 mouse_genomes_project 12 86507706 86744565 + MGP_LPJ_P0035385 Ttll5 protein_coding protein_coding MGP_LPJ_T0035386.1 MGP_LPJ_G0019868.1 mouse_genomes_project 12 86507715 86553181 + Ttll5 protein_coding processed_transcript MGP_LPJ_T0035387.1 MGP_LPJ_G0019868.1 mouse_genomes_project 12 86507715 86745116 + MGP_LPJ_P0035387 Ttll5 protein_coding protein_coding MGP_LPJ_T0035388.1 MGP_LPJ_G0019868.1 mouse_genomes_project 12 86507722 86527101 + MGP_LPJ_P0035388 Ttll5 protein_coding protein_coding MGP_LPJ_T0035389.1 MGP_LPJ_G0019868.1 mouse_genomes_project 12 86507758 86528996 + Ttll5 protein_coding retained_intron MGP_LPJ_T0035390.1 MGP_LPJ_G0019868.1 mouse_genomes_project 12 86507758 86532631 + MGP_LPJ_P0035390 Ttll5 protein_coding nonsense_mediated_decay MGP_LPJ_T0035391.1 MGP_LPJ_G0019868.1 mouse_genomes_project 12 86507812 86745116 + MGP_LPJ_P0035391 Ttll5 protein_coding nonsense_mediated_decay MGP_LPJ_T0035392.1 MGP_LPJ_G0019868.1 mouse_genomes_project 12 86509221 86744566 + MGP_LPJ_P0035392 Ttll5 protein_coding nonsense_mediated_decay MGP_LPJ_T0035393.1 MGP_LPJ_G0019868.1 mouse_genomes_project 12 86562102 86575341 + Ttll5 protein_coding retained_intron MGP_LPJ_T0035394.1 MGP_LPJ_G0019868.1 mouse_genomes_project 12 86599141 86616495 + MGP_LPJ_P0035394 Ttll5 protein_coding protein_coding MGP_LPJ_T0035395.1 MGP_LPJ_G0019868.1 mouse_genomes_project 12 86604360 86745116 + MGP_LPJ_P0035395 Ttll5 protein_coding protein_coding MGP_LPJ_T0035396.1 MGP_LPJ_G0019868.1 mouse_genomes_project 12 86609563 86703029 + MGP_LPJ_P0035396 Ttll5 protein_coding protein_coding MGP_LPJ_T0035397.1 MGP_LPJ_G0019868.1 mouse_genomes_project 12 86620172 86745116 + MGP_LPJ_P0035397 Ttll5 protein_coding protein_coding MGP_LPJ_T0035398.1 MGP_LPJ_G0019868.1 mouse_genomes_project 12 86626776 86754190 + MGP_LPJ_P0035398 Ttll5 protein_coding nonsense_mediated_decay MGP_LPJ_T0034712.1 MGP_LPJ_G0019633.1 mouse_genomes_project 12 51373594 51442210 + MGP_LPJ_P0034712 Arhgap5 protein_coding unknown_likely_coding MGP_LPJ_T0003402.1 MGP_LPJ_G0003126.1 mouse_genomes_project 12 28044643 28047108 + Gm15691 antisense antisense MGP_LPJ_T0009816.1 MGP_LPJ_G0007934.1 mouse_genomes_project 12 69432321 69432431 - Mir681 miRNA miRNA MGP_LPJ_T0009898.1 MGP_LPJ_G0008016.1 mouse_genomes_project 12 111801469 111801542 + Mir485 miRNA miRNA MGP_LPJ_T0000112.1 MGP_LPJ_G0000087.1 mouse_genomes_project 12 117206840 117207274 - MGP_LPJ_P0000112 Ighv1-9 IG_V_gene IG_V_gene MGP_LPJ_T0000113.1 MGP_LPJ_G0000087.1 mouse_genomes_project 12 117206840 117207274 - MGP_LPJ_P0000113 Ighv1-9 IG_V_gene IG_V_gene MGP_LPJ_T0009800.1 MGP_LPJ_G0007918.1 mouse_genomes_project 12 28557261 28557468 - Gm25243 miRNA miRNA MGP_LPJ_T0006506.1 MGP_LPJ_G0005414.1 mouse_genomes_project 12 111760040 111767042 + B830012L14Rik lincRNA lincRNA MGP_LPJ_T0009893.1 MGP_LPJ_G0008011.1 mouse_genomes_project 12 111795388 111795511 + Gm27379 miRNA miRNA MGP_LPJ_T0035302.1 MGP_LPJ_G0019838.1 mouse_genomes_project 12 85006384 85007767 + MGP_LPJ_P0035302 Rnf113a2 protein_coding protein_coding MGP_LPJ_T0034589.1 MGP_LPJ_G0019582.1 mouse_genomes_project 12 32263751 32497497 - MGP_LPJ_P0034589 Gm18025 protein_coding unknown_likely_coding MGP_LPJ_T0034590.1 MGP_LPJ_G0019582.1 mouse_genomes_project 12 32468841 32469643 - MGP_LPJ_P0034590 Gm18025 protein_coding protein_coding MGP_LPJ_T0006450.1 MGP_LPJ_G0005373.1 mouse_genomes_project 12 80807748 80816714 - Gm26777 lincRNA lincRNA MGP_LPJ_T0006418.1 MGP_LPJ_G0005350.1 mouse_genomes_project 12 19080118 19081807 + Gm4419 lincRNA lincRNA MGP_LPJ_T0035178.1 MGP_LPJ_G0019811.1 mouse_genomes_project 12 82945990 82947127 - MGP_LPJ_P0035178 Gm5435 protein_coding protein_coding MGP_LPJ_T0035113.1 MGP_LPJ_G0019786.1 mouse_genomes_project 12 80379120 80384997 - MGP_LPJ_P0035113 Zfp36l1 protein_coding protein_coding MGP_LPJ_T0035114.1 MGP_LPJ_G0019786.1 mouse_genomes_project 12 80380633 80384982 - MGP_LPJ_P0035114 Zfp36l1 protein_coding protein_coding MGP_LPJ_T0035281.1 MGP_LPJ_G0019835.1 mouse_genomes_project 12 84943468 84955598 + MGP_LPJ_P0035281 Coq6 protein_coding protein_coding MGP_LPJ_T0035282.1 MGP_LPJ_G0019835.1 mouse_genomes_project 12 84943779 84955602 + MGP_LPJ_P0035282 Coq6 protein_coding protein_coding MGP_LPJ_T0035283.1 MGP_LPJ_G0019835.1 mouse_genomes_project 12 84943807 84955602 + Coq6 protein_coding retained_intron MGP_LPJ_T0035284.1 MGP_LPJ_G0019835.1 mouse_genomes_project 12 84943841 84955598 + MGP_LPJ_P0035284 Coq6 protein_coding nonsense_mediated_decay MGP_LPJ_T0035285.1 MGP_LPJ_G0019835.1 mouse_genomes_project 12 84943850 84955598 + MGP_LPJ_P0035285 Coq6 protein_coding protein_coding MGP_LPJ_T0035286.1 MGP_LPJ_G0019835.1 mouse_genomes_project 12 84943852 84948910 + Coq6 protein_coding processed_transcript MGP_LPJ_T0035287.1 MGP_LPJ_G0019835.1 mouse_genomes_project 12 84943854 84955594 + Coq6 protein_coding retained_intron MGP_LPJ_T0035288.1 MGP_LPJ_G0019835.1 mouse_genomes_project 12 84943875 84952837 + MGP_LPJ_P0035288 Coq6 protein_coding protein_coding MGP_LPJ_T0035289.1 MGP_LPJ_G0019835.1 mouse_genomes_project 12 84950231 84954049 + Coq6 protein_coding processed_transcript MGP_LPJ_T0035290.1 MGP_LPJ_G0019835.1 mouse_genomes_project 12 84950231 84955598 + Coq6 protein_coding processed_transcript MGP_LPJ_T0035291.1 MGP_LPJ_G0019835.1 mouse_genomes_project 12 84952807 84953971 + Coq6 protein_coding retained_intron MGP_LPJ_T0100220.1 MGP_LPJ_G0038483.1 mouse_genomes_project 12 64911327 64911452 - Gm26015 snoRNA snoRNA MGP_LPJ_T0035984.1 MGP_LPJ_G0020061.1 mouse_genomes_project 12 115076232 115100048 - MGP_LPJ_P0035984 protein_coding unknown_likely_coding MGP_LPJ_T0035985.1 MGP_LPJ_G0020061.1 mouse_genomes_project 12 115076239 115082304 - MGP_LPJ_P0035985 protein_coding protein_coding MGP_LPJ_T0035986.1 MGP_LPJ_G0020061.1 mouse_genomes_project 12 115076479 115079300 - MGP_LPJ_P0035986 protein_coding protein_coding MGP_LPJ_T0034451.1 MGP_LPJ_G0019534.1 mouse_genomes_project 12 22415690 22433835 - MGP_LPJ_P0034451 Cys1 protein_coding nonsense_mediated_decay MGP_LPJ_T0034452.1 MGP_LPJ_G0019534.1 mouse_genomes_project 12 22415700 22433817 - MGP_LPJ_P0034452 Cys1 protein_coding protein_coding MGP_LPJ_T0034453.1 MGP_LPJ_G0019534.1 mouse_genomes_project 12 22415700 22433817 - MGP_LPJ_P0034453 Cys1 protein_coding protein_coding MGP_LPJ_T0034454.1 MGP_LPJ_G0019534.1 mouse_genomes_project 12 22415805 22433044 - MGP_LPJ_P0034454 Cys1 protein_coding nonsense_mediated_decay MGP_LPJ_T0034455.1 MGP_LPJ_G0019534.1 mouse_genomes_project 12 22415805 22433044 - MGP_LPJ_P0034455 Cys1 protein_coding nonsense_mediated_decay MGP_LPJ_T0034456.1 MGP_LPJ_G0019534.1 mouse_genomes_project 12 22416406 22431958 - Cys1 protein_coding processed_transcript MGP_LPJ_T0034457.1 MGP_LPJ_G0019534.1 mouse_genomes_project 12 22416542 22432957 - MGP_LPJ_P0034457 Cys1 protein_coding protein_coding MGP_LPJ_T0034458.1 MGP_LPJ_G0019534.1 mouse_genomes_project 12 22418405 22432740 - MGP_LPJ_P0034458 Cys1 protein_coding protein_coding MGP_LPJ_T0012854.1 MGP_LPJ_G0010945.1 mouse_genomes_project 12 120803698 120804043 - processed_pseudogene processed_pseudogene MGP_LPJ_T0035758.1 MGP_LPJ_G0019991.1 mouse_genomes_project 12 107223115 107264472 + MGP_LPJ_P0035758 D430019H16Rik protein_coding protein_coding MGP_LPJ_T0012801.1 MGP_LPJ_G0010892.1 mouse_genomes_project 12 58331246 58331725 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003424.1 MGP_LPJ_G0003144.1 mouse_genomes_project 12 81865474 81871521 + Gm28370 antisense antisense MGP_LPJ_T0035512.1 MGP_LPJ_G0019902.1 mouse_genomes_project 12 92553832 92715967 - MGP_LPJ_P0035512 Ston2 protein_coding protein_coding MGP_LPJ_T0035513.1 MGP_LPJ_G0019902.1 mouse_genomes_project 12 92557965 92662556 - MGP_LPJ_P0035513 Ston2 protein_coding protein_coding MGP_LPJ_T0035514.1 MGP_LPJ_G0019902.1 mouse_genomes_project 12 92621411 92631867 - Ston2 protein_coding processed_transcript MGP_LPJ_T0035515.1 MGP_LPJ_G0019902.1 mouse_genomes_project 12 92631974 92708668 - MGP_LPJ_P0035515 Ston2 protein_coding protein_coding MGP_LPJ_T0035516.1 MGP_LPJ_G0019902.1 mouse_genomes_project 12 92653722 92700699 - Ston2 protein_coding processed_transcript MGP_LPJ_T0035517.1 MGP_LPJ_G0019902.1 mouse_genomes_project 12 92662318 92664783 - MGP_LPJ_P0035517 Ston2 protein_coding protein_coding MGP_LPJ_T0035518.1 MGP_LPJ_G0019902.1 mouse_genomes_project 12 92715331 92717918 - Ston2 protein_coding processed_transcript MGP_LPJ_T0009872.1 MGP_LPJ_G0007990.1 mouse_genomes_project 12 111778886 111779006 + Mir1197 miRNA miRNA MGP_LPJ_T0009802.1 MGP_LPJ_G0007920.1 mouse_genomes_project 12 33429283 33429370 - Mir680-3 miRNA miRNA MGP_LPJ_T0009809.1 MGP_LPJ_G0007927.1 mouse_genomes_project 12 54884564 54884655 - Gm23394 miRNA miRNA MGP_LPJ_T0000062.1 MGP_LPJ_G0000050.1 mouse_genomes_project 12 116249425 116250083 - MGP_LPJ_P0000062 IG_V_gene IG_V_gene MGP_LPJ_T0034704.1 MGP_LPJ_G0019629.1 mouse_genomes_project 12 50730067 50829908 - MGP_LPJ_P0034704 Heatr5a protein_coding protein_coding MGP_LPJ_T0034593.1 MGP_LPJ_G0019584.1 mouse_genomes_project 12 33073468 33074523 - MGP_LPJ_P0034593 protein_coding protein_coding MGP_LPJ_T0009844.1 MGP_LPJ_G0007962.1 mouse_genomes_project 12 111598255 111598335 + Mir1906-2 miRNA miRNA MGP_LPJ_T0100230.1 MGP_LPJ_G0038493.1 mouse_genomes_project 12 91745608 91745737 + Gm23195 snoRNA snoRNA MGP_LPJ_T0011338.1 MGP_LPJ_G0009456.1 mouse_genomes_project 12 30447291 30447609 - Gm23875 misc_RNA misc_RNA MGP_LPJ_T0035679.1 MGP_LPJ_G0019951.1 mouse_genomes_project 12 104933240 104934239 - MGP_LPJ_P0035679 9330161L09Rik protein_coding protein_coding MGP_LPJ_T0035305.1 MGP_LPJ_G0019840.1 mouse_genomes_project 12 85041858 85054506 + MGP_LPJ_P0035305 unknown_likely_coding unknown_likely_coding MGP_LPJ_T0035306.1 MGP_LPJ_G0019840.1 mouse_genomes_project 12 85041858 85054205 + MGP_LPJ_P0035306 unknown_likely_coding unknown_likely_coding MGP_LPJ_T0000138.1 MGP_LPJ_G0000101.1 mouse_genomes_project 12 118874472 118874930 - MGP_LPJ_P0000138 IG_V_gene IG_V_gene MGP_LPJ_T0000139.1 MGP_LPJ_G0000101.1 mouse_genomes_project 12 118874472 118874766 - MGP_LPJ_P0000139 IG_V_gene IG_V_gene MGP_LPJ_T0035410.1 MGP_LPJ_G0019874.1 mouse_genomes_project 12 87434600 87461775 - MGP_LPJ_P0035410 Angel1 protein_coding protein_coding MGP_LPJ_T0035411.1 MGP_LPJ_G0019874.1 mouse_genomes_project 12 87436293 87440268 - Angel1 protein_coding processed_transcript MGP_LPJ_T0035412.1 MGP_LPJ_G0019874.1 mouse_genomes_project 12 87436411 87451958 - Angel1 protein_coding processed_transcript MGP_LPJ_T0035413.1 MGP_LPJ_G0019874.1 mouse_genomes_project 12 87436453 87440063 - Angel1 protein_coding processed_transcript MGP_LPJ_T0035414.1 MGP_LPJ_G0019874.1 mouse_genomes_project 12 87436537 87453502 - Angel1 protein_coding processed_transcript MGP_LPJ_T0035415.1 MGP_LPJ_G0019874.1 mouse_genomes_project 12 87453661 87457255 - Angel1 protein_coding processed_transcript MGP_LPJ_T0034260.1 MGP_LPJ_G0019463.1 mouse_genomes_project 12 796749 797146 + MGP_LPJ_P0034260 Gm17728 protein_coding protein_coding MGP_LPJ_T0000148.1 MGP_LPJ_G0000109.1 mouse_genomes_project 12 118874473 118874927 - MGP_LPJ_P0000148 IG_V_gene IG_V_gene MGP_LPJ_T0035731.1 MGP_LPJ_G0019974.1 mouse_genomes_project 12 105865119 105871356 + MGP_LPJ_P0035731 Serpina3i protein_coding protein_coding MGP_LPJ_T0035732.1 MGP_LPJ_G0019974.1 mouse_genomes_project 12 105865154 105867735 + Serpina3i protein_coding retained_intron MGP_LPJ_T0034475.1 MGP_LPJ_G0019543.1 mouse_genomes_project 12 26424732 26431246 - protein_coding processed_transcript MGP_LPJ_T0034476.1 MGP_LPJ_G0019543.1 mouse_genomes_project 12 26430587 26439140 - protein_coding processed_transcript MGP_LPJ_T0034477.1 MGP_LPJ_G0019543.1 mouse_genomes_project 12 26430815 26465763 - MGP_LPJ_P0034477 protein_coding protein_coding MGP_LPJ_T0035969.1 MGP_LPJ_G0020057.1 mouse_genomes_project 12 114946633 114968428 - MGP_LPJ_P0035969 Akt1 protein_coding protein_coding MGP_LPJ_T0035970.1 MGP_LPJ_G0020057.1 mouse_genomes_project 12 114947485 114965924 - MGP_LPJ_P0035970 Akt1 protein_coding protein_coding MGP_LPJ_T0035971.1 MGP_LPJ_G0020057.1 mouse_genomes_project 12 114948655 114949786 - Akt1 protein_coding retained_intron MGP_LPJ_T0035972.1 MGP_LPJ_G0020057.1 mouse_genomes_project 12 114949906 114952450 - Akt1 protein_coding retained_intron MGP_LPJ_T0035973.1 MGP_LPJ_G0020057.1 mouse_genomes_project 12 114950374 114951955 - Akt1 protein_coding retained_intron MGP_LPJ_T0035974.1 MGP_LPJ_G0020057.1 mouse_genomes_project 12 114951237 114971114 - MGP_LPJ_P0035974 Akt1 protein_coding protein_coding MGP_LPJ_T0035975.1 MGP_LPJ_G0020057.1 mouse_genomes_project 12 114951972 114968304 - MGP_LPJ_P0035975 Akt1 protein_coding protein_coding MGP_LPJ_T0035976.1 MGP_LPJ_G0020057.1 mouse_genomes_project 12 114952078 114962474 - Akt1 protein_coding processed_transcript MGP_LPJ_T0006489.1 MGP_LPJ_G0005407.1 mouse_genomes_project 12 109664758 109709971 - Gm15208 lincRNA lincRNA MGP_LPJ_T0035915.1 MGP_LPJ_G0020039.1 mouse_genomes_project 12 113897554 113900548 - MGP_LPJ_P0035915 Ckb protein_coding protein_coding MGP_LPJ_T0035437.1 MGP_LPJ_G0019881.1 mouse_genomes_project 12 87918967 87942417 + MGP_LPJ_P0035437 Gstz1 protein_coding protein_coding MGP_LPJ_T0035438.1 MGP_LPJ_G0019881.1 mouse_genomes_project 12 87935313 87941526 + MGP_LPJ_P0035438 Gstz1 protein_coding unknown_likely_coding MGP_LPJ_T0009811.1 MGP_LPJ_G0007929.1 mouse_genomes_project 12 68780568 68780638 + miRNA miRNA MGP_LPJ_T0100257.1 MGP_LPJ_G0038520.1 mouse_genomes_project 12 111752509 111752580 + Gm22205 snoRNA snoRNA MGP_LPJ_T0009914.1 MGP_LPJ_G0008032.1 mouse_genomes_project 12 114388151 114388227 + Mir203 miRNA miRNA MGP_LPJ_T0035846.1 MGP_LPJ_G0020016.1 mouse_genomes_project 12 111644956 111658942 - MGP_LPJ_P0035846 Rtl1 protein_coding protein_coding MGP_LPJ_T0097984.1 MGP_LPJ_G0036265.1 mouse_genomes_project 12 85006382 85007766 + pseudogene pseudogene MGP_LPJ_T0035096.1 MGP_LPJ_G0019778.1 mouse_genomes_project 12 79248162 79297801 + MGP_LPJ_P0035096 Plekhh1 protein_coding protein_coding MGP_LPJ_T0035977.1 MGP_LPJ_G0020058.1 mouse_genomes_project 12 114975057 114980123 + MGP_LPJ_P0035977 Zbtb42 protein_coding protein_coding MGP_LPJ_T0035978.1 MGP_LPJ_G0020058.1 mouse_genomes_project 12 114975069 114980123 + MGP_LPJ_P0035978 Zbtb42 protein_coding protein_coding MGP_LPJ_T0035979.1 MGP_LPJ_G0020058.1 mouse_genomes_project 12 114975107 114977346 + MGP_LPJ_P0035979 Zbtb42 protein_coding protein_coding MGP_LPJ_T0000083.1 MGP_LPJ_G0000067.1 mouse_genomes_project 12 116806991 116807428 - MGP_LPJ_P0000083 Ighv3-3 IG_V_gene IG_V_gene MGP_LPJ_T0000084.1 MGP_LPJ_G0000067.1 mouse_genomes_project 12 116806991 116807287 - MGP_LPJ_P0000084 Ighv3-3 IG_V_gene IG_V_gene MGP_LPJ_T0006452.1 MGP_LPJ_G0005375.1 mouse_genomes_project 12 81204847 81207661 - Gm26545 lincRNA lincRNA MGP_LPJ_T0000090.1 MGP_LPJ_G0000071.1 mouse_genomes_project 12 116896428 116896859 - MGP_LPJ_P0000090 Ighv3-6 IG_V_gene IG_V_gene MGP_LPJ_T0000091.1 MGP_LPJ_G0000071.1 mouse_genomes_project 12 116896433 116896859 - MGP_LPJ_P0000091 Ighv3-6 IG_V_gene IG_V_gene MGP_LPJ_T0000095.1 MGP_LPJ_G0000074.1 mouse_genomes_project 12 116963082 116963384 - MGP_LPJ_P0000095 Ighv13-2 IG_V_gene IG_V_gene MGP_LPJ_T0000096.1 MGP_LPJ_G0000074.1 mouse_genomes_project 12 116963082 116963542 - MGP_LPJ_P0000096 Ighv13-2 IG_V_gene IG_V_gene MGP_LPJ_T0098995.1 MGP_LPJ_G0037258.1 mouse_genomes_project 12 79326847 79326952 - Gm27297 snRNA snRNA MGP_LPJ_T0036061.1 MGP_LPJ_G0020090.1 mouse_genomes_project 12 121883983 121985479 - MGP_LPJ_P0036061 Abcb5 protein_coding protein_coding MGP_LPJ_T0036062.1 MGP_LPJ_G0020090.1 mouse_genomes_project 12 121902118 121906733 - Abcb5 protein_coding retained_intron MGP_LPJ_T0036063.1 MGP_LPJ_G0020090.1 mouse_genomes_project 12 121902591 121941087 - Abcb5 protein_coding processed_transcript MGP_LPJ_T0000264.1 MGP_LPJ_G0000202.1 mouse_genomes_project 12 116109986 116110360 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0035098.1 MGP_LPJ_G0019780.1 mouse_genomes_project 12 79342163 79370413 + MGP_LPJ_P0035098 Arg2 protein_coding protein_coding MGP_LPJ_T0009882.1 MGP_LPJ_G0008000.1 mouse_genomes_project 12 111786575 111786667 + Mir667 miRNA miRNA MGP_LPJ_T0000276.1 MGP_LPJ_G0000214.1 mouse_genomes_project 12 116500607 116501038 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0100228.1 MGP_LPJ_G0038491.1 mouse_genomes_project 12 83232389 83232525 - Gm22149 snoRNA snoRNA MGP_LPJ_T0009869.1 MGP_LPJ_G0007987.1 mouse_genomes_project 12 111777214 111777263 - Mir299b miRNA miRNA MGP_LPJ_T0003397.1 MGP_LPJ_G0003123.1 mouse_genomes_project 12 215580 241886 - 1110002L01Rik antisense antisense MGP_LPJ_T0003398.1 MGP_LPJ_G0003123.1 mouse_genomes_project 12 217023 241589 - 1110002L01Rik antisense antisense MGP_LPJ_T0003399.1 MGP_LPJ_G0003123.1 mouse_genomes_project 12 217541 241622 - 1110002L01Rik antisense antisense MGP_LPJ_T0101806.1 MGP_LPJ_G0039843.1 mouse_genomes_project 12 105311104 105322158 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0009894.1 MGP_LPJ_G0008012.1 mouse_genomes_project 12 111795892 111795970 + Mir544 miRNA miRNA MGP_LPJ_T0034363.1 MGP_LPJ_G0019504.1 mouse_genomes_project 12 8731542 8738440 + MGP_LPJ_P0034363 Rad51ap2 protein_coding protein_coding MGP_LPJ_T0035799.1 MGP_LPJ_G0020002.1 mouse_genomes_project 12 110140439 110163660 + MGP_LPJ_P0035799 Ccnk protein_coding protein_coding MGP_LPJ_T0035582.1 MGP_LPJ_G0019920.1 mouse_genomes_project 12 101611961 101731794 - MGP_LPJ_P0035582 Ttc7b protein_coding unknown_likely_coding MGP_LPJ_T0035583.1 MGP_LPJ_G0019920.1 mouse_genomes_project 12 101611964 101832930 - MGP_LPJ_P0035583 Ttc7b protein_coding protein_coding MGP_LPJ_T0000067.1 MGP_LPJ_G0000054.1 mouse_genomes_project 12 116375053 116375538 - MGP_LPJ_P0000067 Ighv5-16 IG_V_gene IG_V_gene MGP_LPJ_T0000068.1 MGP_LPJ_G0000054.1 mouse_genomes_project 12 116375053 116375511 - MGP_LPJ_P0000068 Ighv5-16 IG_V_gene IG_V_gene MGP_LPJ_T0098403.1 MGP_LPJ_G0036684.1 mouse_genomes_project 12 106742776 106743051 - Scarna13 scaRNA scaRNA MGP_LPJ_T0035089.1 MGP_LPJ_G0019773.1 mouse_genomes_project 12 78942679 79040517 + MGP_LPJ_P0035089 Mpp5 protein_coding protein_coding MGP_LPJ_T0034286.1 MGP_LPJ_G0019474.1 mouse_genomes_project 12 1640013 1669077 - MGP_LPJ_P0034286 Fam228a protein_coding protein_coding MGP_LPJ_T0003423.1 MGP_LPJ_G0003143.1 mouse_genomes_project 12 81579320 81594230 + Gm3693 antisense antisense MGP_LPJ_T0009842.1 MGP_LPJ_G0007960.1 mouse_genomes_project 12 110858664 110858760 + Mir345 miRNA miRNA MGP_LPJ_T0000306.1 MGP_LPJ_G0000244.1 mouse_genomes_project 12 118322333 118322763 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0006463.1 MGP_LPJ_G0005386.1 mouse_genomes_project 12 91691023 91884438 - 4930544I03Rik lincRNA lincRNA MGP_LPJ_T0098142.1 MGP_LPJ_G0036423.1 mouse_genomes_project 12 82585352 82585448 + n-R5s62 rRNA rRNA MGP_LPJ_T0034795.1 MGP_LPJ_G0019671.1 mouse_genomes_project 12 58332979 58427580 + MGP_LPJ_P0034795 Ctage5 protein_coding unknown_likely_coding MGP_LPJ_T0034796.1 MGP_LPJ_G0019671.1 mouse_genomes_project 12 58364396 58427575 + MGP_LPJ_P0034796 Ctage5 protein_coding protein_coding MGP_LPJ_T0034797.1 MGP_LPJ_G0019671.1 mouse_genomes_project 12 58364422 58427572 + MGP_LPJ_P0034797 Ctage5 protein_coding protein_coding MGP_LPJ_T0034798.1 MGP_LPJ_G0019671.1 mouse_genomes_project 12 58364439 58427575 + MGP_LPJ_P0034798 Ctage5 protein_coding protein_coding MGP_LPJ_T0034799.1 MGP_LPJ_G0019671.1 mouse_genomes_project 12 58364441 58383947 + MGP_LPJ_P0034799 Ctage5 protein_coding protein_coding MGP_LPJ_T0034800.1 MGP_LPJ_G0019671.1 mouse_genomes_project 12 58364461 58427621 + MGP_LPJ_P0034800 Ctage5 protein_coding nonsense_mediated_decay MGP_LPJ_T0034801.1 MGP_LPJ_G0019671.1 mouse_genomes_project 12 58364486 58404709 + MGP_LPJ_P0034801 Ctage5 protein_coding nonsense_mediated_decay MGP_LPJ_T0034802.1 MGP_LPJ_G0019671.1 mouse_genomes_project 12 58365053 58427349 + MGP_LPJ_P0034802 Ctage5 protein_coding protein_coding MGP_LPJ_T0034803.1 MGP_LPJ_G0019671.1 mouse_genomes_project 12 58365513 58427621 + MGP_LPJ_P0034803 Ctage5 protein_coding protein_coding MGP_LPJ_T0034804.1 MGP_LPJ_G0019671.1 mouse_genomes_project 12 58365698 58381281 + MGP_LPJ_P0034804 Ctage5 protein_coding protein_coding MGP_LPJ_T0034805.1 MGP_LPJ_G0019671.1 mouse_genomes_project 12 58365962 58429082 + MGP_LPJ_P0034805 Ctage5 protein_coding protein_coding MGP_LPJ_T0034806.1 MGP_LPJ_G0019671.1 mouse_genomes_project 12 58366129 58427572 + MGP_LPJ_P0034806 Ctage5 protein_coding protein_coding MGP_LPJ_T0034807.1 MGP_LPJ_G0019671.1 mouse_genomes_project 12 58366143 58427351 + MGP_LPJ_P0034807 Ctage5 protein_coding protein_coding MGP_LPJ_T0034808.1 MGP_LPJ_G0019671.1 mouse_genomes_project 12 58366157 58379384 + Ctage5 protein_coding retained_intron MGP_LPJ_T0034809.1 MGP_LPJ_G0019671.1 mouse_genomes_project 12 58366178 58427621 + MGP_LPJ_P0034809 Ctage5 protein_coding protein_coding MGP_LPJ_T0034810.1 MGP_LPJ_G0019671.1 mouse_genomes_project 12 58370784 58427351 + MGP_LPJ_P0034810 Ctage5 protein_coding nonsense_mediated_decay MGP_LPJ_T0034811.1 MGP_LPJ_G0019671.1 mouse_genomes_project 12 58383919 58427351 + MGP_LPJ_P0034811 Ctage5 protein_coding nonsense_mediated_decay MGP_LPJ_T0034812.1 MGP_LPJ_G0019671.1 mouse_genomes_project 12 58398653 58421577 + MGP_LPJ_P0034812 Ctage5 protein_coding nonsense_mediated_decay MGP_LPJ_T0034813.1 MGP_LPJ_G0019671.1 mouse_genomes_project 12 58402553 58412802 + Ctage5 protein_coding retained_intron MGP_LPJ_T0034814.1 MGP_LPJ_G0019671.1 mouse_genomes_project 12 58404622 58427039 + Ctage5 protein_coding retained_intron MGP_LPJ_T0034815.1 MGP_LPJ_G0019671.1 mouse_genomes_project 12 58404751 58406817 + Ctage5 protein_coding retained_intron MGP_LPJ_T0034816.1 MGP_LPJ_G0019671.1 mouse_genomes_project 12 58416798 58425918 + Ctage5 protein_coding retained_intron MGP_LPJ_T0034474.1 MGP_LPJ_G0019542.1 mouse_genomes_project 12 25196035 25204359 - MGP_LPJ_P0034474 Sox11 protein_coding protein_coding MGP_LPJ_T0034562.1 MGP_LPJ_G0019573.1 mouse_genomes_project 12 30472797 30477037 + MGP_LPJ_P0034562 Ccdc71l protein_coding protein_coding MGP_LPJ_T0034539.1 MGP_LPJ_G0019565.1 mouse_genomes_project 12 29569560 29610388 - MGP_LPJ_P0034539 Slc26a4 protein_coding protein_coding MGP_LPJ_T0009911.1 MGP_LPJ_G0008029.1 mouse_genomes_project 12 112821274 112821377 + Gm27299 miRNA miRNA MGP_LPJ_T0034943.1 MGP_LPJ_G0019720.1 mouse_genomes_project 12 71643605 71802951 + MGP_LPJ_P0034943 Daam1 protein_coding protein_coding MGP_LPJ_T0100229.1 MGP_LPJ_G0038492.1 mouse_genomes_project 12 88224828 88224964 - Mir3068 snoRNA snoRNA MGP_LPJ_T0009863.1 MGP_LPJ_G0007981.1 mouse_genomes_project 12 111677781 111677868 + Gm23912 miRNA miRNA MGP_LPJ_T0035494.1 MGP_LPJ_G0019898.1 mouse_genomes_project 12 91662452 91676382 - MGP_LPJ_P0035494 Dio2 protein_coding protein_coding MGP_LPJ_T0034290.1 MGP_LPJ_G0019477.1 mouse_genomes_project 12 1733901 1743803 + MGP_LPJ_P0034290 Sf3b6 protein_coding protein_coding MGP_LPJ_T0034655.1 MGP_LPJ_G0019606.1 mouse_genomes_project 12 38619314 38621796 + MGP_LPJ_P0034655 Gm7008 protein_coding protein_coding MGP_LPJ_T0034656.1 MGP_LPJ_G0019606.1 mouse_genomes_project 12 38619920 38625730 + MGP_LPJ_P0034656 Gm7008 protein_coding nonsense_mediated_decay MGP_LPJ_T0034657.1 MGP_LPJ_G0019606.1 mouse_genomes_project 12 38619985 38625715 + MGP_LPJ_P0034657 Gm7008 protein_coding nonsense_mediated_decay MGP_LPJ_T0006413.1 MGP_LPJ_G0005345.1 mouse_genomes_project 12 6750140 6755606 - 1700022H16Rik lincRNA lincRNA MGP_LPJ_T0000127.1 MGP_LPJ_G0000095.1 mouse_genomes_project 12 118304911 118305214 - MGP_LPJ_P0000127 IG_V_gene IG_V_gene MGP_LPJ_T0000131.1 MGP_LPJ_G0000095.1 mouse_genomes_project 12 118304915 118305214 - MGP_LPJ_P0000131 IG_V_gene IG_V_gene MGP_LPJ_T0034594.1 MGP_LPJ_G0019585.1 mouse_genomes_project 12 33208702 33210378 + MGP_LPJ_P0034594 Prps1l1 protein_coding protein_coding MGP_LPJ_T0034723.1 MGP_LPJ_G0019640.1 mouse_genomes_project 12 53871653 53875714 - MGP_LPJ_P0034723 Cfl2 protein_coding protein_coding MGP_LPJ_T0009901.1 MGP_LPJ_G0008019.1 mouse_genomes_project 12 111805684 111805763 + Mir496a miRNA miRNA MGP_LPJ_T0035822.1 MGP_LPJ_G0020011.1 mouse_genomes_project 12 110874796 110880482 + MGP_LPJ_P0035822 Slc25a47 protein_coding protein_coding MGP_LPJ_T0034473.1 MGP_LPJ_G0019541.1 mouse_genomes_project 12 24271204 24282592 + MGP_LPJ_P0034473 Cmpk2 protein_coding protein_coding MGP_LPJ_T0035267.1 MGP_LPJ_G0019832.1 mouse_genomes_project 12 84862899 84894759 + MGP_LPJ_P0035267 Ptgr2 protein_coding protein_coding MGP_LPJ_T0035268.1 MGP_LPJ_G0019832.1 mouse_genomes_project 12 84863032 84882213 + Ptgr2 protein_coding retained_intron MGP_LPJ_T0035269.1 MGP_LPJ_G0019832.1 mouse_genomes_project 12 84863041 84888143 + MGP_LPJ_P0035269 Ptgr2 protein_coding protein_coding MGP_LPJ_T0035270.1 MGP_LPJ_G0019832.1 mouse_genomes_project 12 84863048 84876556 + Ptgr2 protein_coding retained_intron MGP_LPJ_T0035271.1 MGP_LPJ_G0019832.1 mouse_genomes_project 12 84863051 84886622 + Ptgr2 protein_coding processed_transcript MGP_LPJ_T0035272.1 MGP_LPJ_G0019832.1 mouse_genomes_project 12 84863066 84884269 + Ptgr2 protein_coding processed_transcript MGP_LPJ_T0035273.1 MGP_LPJ_G0019832.1 mouse_genomes_project 12 84863067 84893029 + MGP_LPJ_P0035273 Ptgr2 protein_coding protein_coding MGP_LPJ_T0035274.1 MGP_LPJ_G0019832.1 mouse_genomes_project 12 84863073 84893781 + MGP_LPJ_P0035274 Ptgr2 protein_coding protein_coding MGP_LPJ_T0035275.1 MGP_LPJ_G0019832.1 mouse_genomes_project 12 84863080 84893029 + MGP_LPJ_P0035275 Ptgr2 protein_coding nonsense_mediated_decay MGP_LPJ_T0000071.1 MGP_LPJ_G0000057.1 mouse_genomes_project 12 116429080 116429629 - MGP_LPJ_P0000071 Ighv7-1 IG_V_gene IG_V_gene MGP_LPJ_T0035791.1 MGP_LPJ_G0020001.1 mouse_genomes_project 12 110054016 110140252 - MGP_LPJ_P0035791 protein_coding protein_coding MGP_LPJ_T0035792.1 MGP_LPJ_G0020001.1 mouse_genomes_project 12 110054251 110069918 - protein_coding retained_intron MGP_LPJ_T0035793.1 MGP_LPJ_G0020001.1 mouse_genomes_project 12 110056375 110140165 - MGP_LPJ_P0035793 protein_coding nonsense_mediated_decay MGP_LPJ_T0035794.1 MGP_LPJ_G0020001.1 mouse_genomes_project 12 110067100 110070054 - protein_coding processed_transcript MGP_LPJ_T0035795.1 MGP_LPJ_G0020001.1 mouse_genomes_project 12 110071745 110140154 - MGP_LPJ_P0035795 protein_coding protein_coding MGP_LPJ_T0035796.1 MGP_LPJ_G0020001.1 mouse_genomes_project 12 110072004 110140201 - MGP_LPJ_P0035796 protein_coding nonsense_mediated_decay MGP_LPJ_T0035797.1 MGP_LPJ_G0020001.1 mouse_genomes_project 12 110073267 110121068 - protein_coding processed_transcript MGP_LPJ_T0035798.1 MGP_LPJ_G0020001.1 mouse_genomes_project 12 110116042 110140151 - MGP_LPJ_P0035798 protein_coding protein_coding MGP_LPJ_T0000107.1 MGP_LPJ_G0000084.1 mouse_genomes_project 12 117134845 117135139 - MGP_LPJ_P0000107 Ighv1-5 IG_V_gene IG_V_gene MGP_LPJ_T0000108.1 MGP_LPJ_G0000084.1 mouse_genomes_project 12 117134845 117135323 - MGP_LPJ_P0000108 Ighv1-5 IG_V_gene IG_V_gene MGP_LPJ_T0003414.1 MGP_LPJ_G0003136.1 mouse_genomes_project 12 56748171 56776042 - 4921518K17Rik antisense antisense MGP_LPJ_T0100253.1 MGP_LPJ_G0038516.1 mouse_genomes_project 12 111746535 111746610 + Gm22981 snoRNA snoRNA MGP_LPJ_T0009831.1 MGP_LPJ_G0007949.1 mouse_genomes_project 12 92046743 92046855 + Gm44370 miRNA miRNA MGP_LPJ_T0009796.1 MGP_LPJ_G0007914.1 mouse_genomes_project 12 14901942 14902025 + Mir3066 miRNA miRNA MGP_LPJ_T0100236.1 MGP_LPJ_G0038499.1 mouse_genomes_project 12 111691210 111691285 + Gm24564 snoRNA snoRNA MGP_LPJ_T0034315.1 MGP_LPJ_G0019488.1 mouse_genomes_project 12 5568839 5571062 - MGP_LPJ_P0034315 Rhob protein_coding protein_coding MGP_LPJ_T0035733.1 MGP_LPJ_G0019975.1 mouse_genomes_project 12 105933337 105939519 + MGP_LPJ_P0035733 Serpina3j protein_coding protein_coding MGP_LPJ_T0034794.1 MGP_LPJ_G0019670.1 mouse_genomes_project 12 58332978 58346823 + MGP_LPJ_P0034794 Mia2 protein_coding protein_coding MGP_LPJ_T0000033.1 MGP_LPJ_G0000026.1 mouse_genomes_project 12 115805096 115805125 - IG_D_pseudogene IG_D_pseudogene MGP_LPJ_T0012803.1 MGP_LPJ_G0010894.1 mouse_genomes_project 12 60734265 60735238 - processed_pseudogene processed_pseudogene MGP_LPJ_T0034588.1 MGP_LPJ_G0019581.1 mouse_genomes_project 12 32128543 32130690 + MGP_LPJ_P0034588 Twist1 protein_coding protein_coding MGP_LPJ_T0035054.1 MGP_LPJ_G0019759.1 mouse_genomes_project 12 76491833 76494592 + MGP_LPJ_P0035054 Hspa2 protein_coding protein_coding MGP_LPJ_T0009838.1 MGP_LPJ_G0007956.1 mouse_genomes_project 12 106742778 106742843 - Mir3069 miRNA miRNA MGP_LPJ_T0034752.1 MGP_LPJ_G0019653.1 mouse_genomes_project 12 54655372 54884669 - MGP_LPJ_P0034752 Ralgapa1 protein_coding protein_coding MGP_LPJ_T0034753.1 MGP_LPJ_G0019653.1 mouse_genomes_project 12 54664139 54884269 - MGP_LPJ_P0034753 Ralgapa1 protein_coding unknown_likely_coding MGP_LPJ_T0035358.1 MGP_LPJ_G0019858.1 mouse_genomes_project 12 85916337 85924383 - MGP_LPJ_P0035358 Acyp1 protein_coding protein_coding MGP_LPJ_T0035359.1 MGP_LPJ_G0019858.1 mouse_genomes_project 12 85916348 85924254 - MGP_LPJ_P0035359 Acyp1 protein_coding protein_coding MGP_LPJ_T0035360.1 MGP_LPJ_G0019858.1 mouse_genomes_project 12 85916486 85933014 - MGP_LPJ_P0035360 Acyp1 protein_coding protein_coding MGP_LPJ_T0035361.1 MGP_LPJ_G0019858.1 mouse_genomes_project 12 85922840 85924366 - MGP_LPJ_P0035361 Acyp1 protein_coding protein_coding MGP_LPJ_T0011344.1 MGP_LPJ_G0009462.1 mouse_genomes_project 12 69004312 69004612 - Rn7s2 misc_RNA misc_RNA MGP_LPJ_T0000114.1 MGP_LPJ_G0000088.1 mouse_genomes_project 12 117239909 117240342 - MGP_LPJ_P0000114 Ighv1-11 IG_V_gene IG_V_gene MGP_LPJ_T0000894.1 MGP_LPJ_G0000823.1 mouse_genomes_project 12 72847422 72848238 + TEC TEC MGP_LPJ_T0012818.1 MGP_LPJ_G0010909.1 mouse_genomes_project 12 84144113 84144501 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003418.1 MGP_LPJ_G0003139.1 mouse_genomes_project 12 70750154 70776839 - 3110056K07Rik antisense antisense MGP_LPJ_T0003419.1 MGP_LPJ_G0003139.1 mouse_genomes_project 12 70771037 70777075 - 3110056K07Rik antisense antisense MGP_LPJ_T0034903.1 MGP_LPJ_G0019708.1 mouse_genomes_project 12 69857051 69890900 + Abhd12b protein_coding retained_intron MGP_LPJ_T0034904.1 MGP_LPJ_G0019708.1 mouse_genomes_project 12 69857066 69891440 + MGP_LPJ_P0034904 Abhd12b protein_coding protein_coding MGP_LPJ_T0034905.1 MGP_LPJ_G0019708.1 mouse_genomes_project 12 69857066 69891440 + MGP_LPJ_P0034905 Abhd12b protein_coding nonsense_mediated_decay MGP_LPJ_T0034906.1 MGP_LPJ_G0019708.1 mouse_genomes_project 12 69857066 69891440 + MGP_LPJ_P0034906 Abhd12b protein_coding nonsense_mediated_decay MGP_LPJ_T0034907.1 MGP_LPJ_G0019708.1 mouse_genomes_project 12 69857066 69891440 + MGP_LPJ_P0034907 Abhd12b protein_coding protein_coding MGP_LPJ_T0034908.1 MGP_LPJ_G0019708.1 mouse_genomes_project 12 69889600 69890900 + Abhd12b protein_coding retained_intron MGP_LPJ_T0035092.1 MGP_LPJ_G0019776.1 mouse_genomes_project 12 79090435 79110719 - MGP_LPJ_P0035092 Plek2 protein_coding protein_coding MGP_LPJ_T0035576.1 MGP_LPJ_G0019917.1 mouse_genomes_project 12 101409246 101425953 + MGP_LPJ_P0035576 Psmc1 protein_coding protein_coding MGP_LPJ_T0035707.1 MGP_LPJ_G0019961.1 mouse_genomes_project 12 105331485 105339014 - MGP_LPJ_P0035707 protein_coding protein_coding MGP_LPJ_T0034614.1 MGP_LPJ_G0019596.1 mouse_genomes_project 12 34696527 34697467 - MGP_LPJ_P0034614 D630036H23Rik protein_coding protein_coding MGP_LPJ_T0035555.1 MGP_LPJ_G0019913.1 mouse_genomes_project 12 100432407 100655390 - MGP_LPJ_P0035555 Foxn3 protein_coding protein_coding MGP_LPJ_T0035556.1 MGP_LPJ_G0019913.1 mouse_genomes_project 12 100432521 100654665 - MGP_LPJ_P0035556 Foxn3 protein_coding protein_coding MGP_LPJ_T0035557.1 MGP_LPJ_G0019913.1 mouse_genomes_project 12 100432521 100712232 - MGP_LPJ_P0035557 Foxn3 protein_coding protein_coding MGP_LPJ_T0035558.1 MGP_LPJ_G0019913.1 mouse_genomes_project 12 100434219 100529187 - MGP_LPJ_P0035558 Foxn3 protein_coding protein_coding MGP_LPJ_T0035559.1 MGP_LPJ_G0019913.1 mouse_genomes_project 12 100446994 100529186 - MGP_LPJ_P0035559 Foxn3 protein_coding protein_coding MGP_LPJ_T0035560.1 MGP_LPJ_G0019913.1 mouse_genomes_project 12 100529172 100610271 - Foxn3 protein_coding processed_transcript MGP_LPJ_T0035561.1 MGP_LPJ_G0019913.1 mouse_genomes_project 12 100594923 100675350 - MGP_LPJ_P0035561 Foxn3 protein_coding protein_coding MGP_LPJ_T0035562.1 MGP_LPJ_G0019913.1 mouse_genomes_project 12 100647297 100712255 - Foxn3 protein_coding retained_intron MGP_LPJ_T0035563.1 MGP_LPJ_G0019913.1 mouse_genomes_project 12 100649319 100712269 - MGP_LPJ_P0035563 Foxn3 protein_coding protein_coding MGP_LPJ_T0034351.1 MGP_LPJ_G0019496.1 mouse_genomes_project 12 6760599 6767649 + MGP_LPJ_P0034351 Osr1 protein_coding protein_coding MGP_LPJ_T0100203.1 MGP_LPJ_G0038466.1 mouse_genomes_project 12 33102138 33102270 + Gm24429 snoRNA snoRNA MGP_LPJ_T0035314.1 MGP_LPJ_G0019845.1 mouse_genomes_project 12 85368516 85387069 - MGP_LPJ_P0035314 Npc2 protein_coding protein_coding MGP_LPJ_T0000274.1 MGP_LPJ_G0000212.1 mouse_genomes_project 12 116411048 116411468 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0035637.1 MGP_LPJ_G0019936.1 mouse_genomes_project 12 104042234 104052282 + MGP_LPJ_P0035637 Chga protein_coding protein_coding MGP_LPJ_T0035147.1 MGP_LPJ_G0019801.1 mouse_genomes_project 12 81708864 81858421 - MGP_LPJ_P0035147 Cox16 protein_coding protein_coding MGP_LPJ_T0035148.1 MGP_LPJ_G0019801.1 mouse_genomes_project 12 81709006 81858384 - MGP_LPJ_P0035148 Cox16 protein_coding protein_coding MGP_LPJ_T0035152.1 MGP_LPJ_G0019801.1 mouse_genomes_project 12 81841536 81858431 - MGP_LPJ_P0035152 Cox16 protein_coding protein_coding MGP_LPJ_T0035153.1 MGP_LPJ_G0019801.1 mouse_genomes_project 12 81842925 81858140 - Cox16 protein_coding processed_transcript MGP_LPJ_T0035154.1 MGP_LPJ_G0019801.1 mouse_genomes_project 12 81842925 81858424 - MGP_LPJ_P0035154 Cox16 protein_coding protein_coding MGP_LPJ_T0035155.1 MGP_LPJ_G0019801.1 mouse_genomes_project 12 81842927 81858162 - Cox16 protein_coding processed_transcript MGP_LPJ_T0035156.1 MGP_LPJ_G0019801.1 mouse_genomes_project 12 81845066 81858438 - Cox16 protein_coding processed_transcript MGP_LPJ_T0035157.1 MGP_LPJ_G0019801.1 mouse_genomes_project 12 81845087 81858425 - MGP_LPJ_P0035157 Cox16 protein_coding protein_coding MGP_LPJ_T0035161.1 MGP_LPJ_G0019801.1 mouse_genomes_project 12 81851999 81858396 - Cox16 protein_coding retained_intron MGP_LPJ_T0000088.1 MGP_LPJ_G0000070.1 mouse_genomes_project 12 116869170 116869606 - MGP_LPJ_P0000088 Ighv3-5 IG_V_gene IG_V_gene MGP_LPJ_T0000089.1 MGP_LPJ_G0000070.1 mouse_genomes_project 12 116869170 116869469 - MGP_LPJ_P0000089 Ighv3-5 IG_V_gene IG_V_gene MGP_LPJ_T0034781.1 MGP_LPJ_G0019664.1 mouse_genomes_project 12 57393718 57395835 + MGP_LPJ_P0034781 Sstr1 protein_coding protein_coding MGP_LPJ_T0034782.1 MGP_LPJ_G0019664.1 mouse_genomes_project 12 57393750 57396213 + MGP_LPJ_P0034782 Sstr1 protein_coding protein_coding MGP_LPJ_T0034999.1 MGP_LPJ_G0019740.1 mouse_genomes_project 12 73508417 73714863 + MGP_LPJ_P0034999 Prkch protein_coding protein_coding MGP_LPJ_T0035000.1 MGP_LPJ_G0019740.1 mouse_genomes_project 12 73508463 73698324 + MGP_LPJ_P0035000 Prkch protein_coding protein_coding MGP_LPJ_T0098989.1 MGP_LPJ_G0037252.1 mouse_genomes_project 12 69682671 69682774 - Gm23579 snRNA snRNA MGP_LPJ_T0034691.1 MGP_LPJ_G0019623.1 mouse_genomes_project 12 50165472 50198502 + MGP_LPJ_P0034691 G2e3 protein_coding protein_coding MGP_LPJ_T0034692.1 MGP_LPJ_G0019623.1 mouse_genomes_project 12 50165708 50194725 + MGP_LPJ_P0034692 G2e3 protein_coding protein_coding MGP_LPJ_T0034693.1 MGP_LPJ_G0019623.1 mouse_genomes_project 12 50165792 50194828 + MGP_LPJ_P0034693 G2e3 protein_coding protein_coding MGP_LPJ_T0034694.1 MGP_LPJ_G0019623.1 mouse_genomes_project 12 50176190 50184007 + G2e3 protein_coding retained_intron MGP_LPJ_T0034695.1 MGP_LPJ_G0019623.1 mouse_genomes_project 12 50191121 50195535 + G2e3 protein_coding retained_intron MGP_LPJ_T0009854.1 MGP_LPJ_G0007972.1 mouse_genomes_project 12 111648275 111648366 + Mir431 miRNA miRNA MGP_LPJ_T0000099.1 MGP_LPJ_G0000077.1 mouse_genomes_project 12 117047487 117047944 - MGP_LPJ_P0000099 Ighv6-6 IG_V_gene IG_V_gene MGP_LPJ_T0036043.1 MGP_LPJ_G0020082.1 mouse_genomes_project 12 119184152 119279355 + MGP_LPJ_P0036043 Esyt2 protein_coding protein_coding MGP_LPJ_T0006504.1 MGP_LPJ_G0005412.1 mouse_genomes_project 12 111624389 111627485 - Gm26906 lincRNA lincRNA MGP_LPJ_T0000300.1 MGP_LPJ_G0000238.1 mouse_genomes_project 12 117702387 117702682 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0006410.1 MGP_LPJ_G0005342.1 mouse_genomes_project 12 4417587 4425861 - 1700101O22Rik lincRNA lincRNA MGP_LPJ_T0035232.1 MGP_LPJ_G0019819.1 mouse_genomes_project 12 84319291 84460846 - MGP_LPJ_P0035232 Numb protein_coding protein_coding MGP_LPJ_T0035233.1 MGP_LPJ_G0019819.1 mouse_genomes_project 12 84319293 84415019 - MGP_LPJ_P0035233 Numb protein_coding nonsense_mediated_decay MGP_LPJ_T0035234.1 MGP_LPJ_G0019819.1 mouse_genomes_project 12 84319328 84460756 - MGP_LPJ_P0035234 Numb protein_coding nonsense_mediated_decay MGP_LPJ_T0035235.1 MGP_LPJ_G0019819.1 mouse_genomes_project 12 84320696 84369897 - MGP_LPJ_P0035235 Numb protein_coding protein_coding MGP_LPJ_T0035236.1 MGP_LPJ_G0019819.1 mouse_genomes_project 12 84320696 84369897 - MGP_LPJ_P0035236 Numb protein_coding protein_coding MGP_LPJ_T0035237.1 MGP_LPJ_G0019819.1 mouse_genomes_project 12 84320696 84369897 - MGP_LPJ_P0035237 Numb protein_coding protein_coding MGP_LPJ_T0035238.1 MGP_LPJ_G0019819.1 mouse_genomes_project 12 84329199 84460779 - MGP_LPJ_P0035238 Numb protein_coding protein_coding MGP_LPJ_T0035239.1 MGP_LPJ_G0019819.1 mouse_genomes_project 12 84333320 84460768 - MGP_LPJ_P0035239 Numb protein_coding protein_coding MGP_LPJ_T0035240.1 MGP_LPJ_G0019819.1 mouse_genomes_project 12 84333391 84460795 - MGP_LPJ_P0035240 Numb protein_coding protein_coding MGP_LPJ_T0035241.1 MGP_LPJ_G0019819.1 mouse_genomes_project 12 84336623 84460802 - MGP_LPJ_P0035241 Numb protein_coding protein_coding MGP_LPJ_T0035242.1 MGP_LPJ_G0019819.1 mouse_genomes_project 12 84358180 84415007 - Numb protein_coding retained_intron MGP_LPJ_T0034697.1 MGP_LPJ_G0019625.1 mouse_genomes_project 12 50430704 50443072 + MGP_LPJ_P0034697 Coch protein_coding protein_coding MGP_LPJ_T0034698.1 MGP_LPJ_G0019625.1 mouse_genomes_project 12 50430704 50443072 + MGP_LPJ_P0034698 Coch protein_coding protein_coding MGP_LPJ_T0009807.1 MGP_LPJ_G0007925.1 mouse_genomes_project 12 42745993 42746054 + Mir5627 miRNA miRNA MGP_LPJ_T0034856.1 MGP_LPJ_G0019687.1 mouse_genomes_project 12 68789874 68801234 + MGP_LPJ_P0034856 Lrr1 protein_coding protein_coding MGP_LPJ_T0034542.1 MGP_LPJ_G0019567.1 mouse_genomes_project 12 29697914 29713612 - MGP_LPJ_P0034542 Dus4l protein_coding protein_coding MGP_LPJ_T0034558.1 MGP_LPJ_G0019572.1 mouse_genomes_project 12 30259012 30298557 - MGP_LPJ_P0034558 Pik3cg protein_coding nonsense_mediated_decay MGP_LPJ_T0034559.1 MGP_LPJ_G0019572.1 mouse_genomes_project 12 30259709 30298605 - MGP_LPJ_P0034559 Pik3cg protein_coding protein_coding MGP_LPJ_T0034560.1 MGP_LPJ_G0019572.1 mouse_genomes_project 12 30261163 30298416 - MGP_LPJ_P0034560 Pik3cg protein_coding protein_coding MGP_LPJ_T0034561.1 MGP_LPJ_G0019572.1 mouse_genomes_project 12 30290496 30290955 - Pik3cg protein_coding retained_intron MGP_LPJ_T0035130.1 MGP_LPJ_G0019796.1 mouse_genomes_project 12 81274647 81280995 + protein_coding retained_intron MGP_LPJ_T0035131.1 MGP_LPJ_G0019796.1 mouse_genomes_project 12 81274659 81280995 + protein_coding retained_intron MGP_LPJ_T0035132.1 MGP_LPJ_G0019796.1 mouse_genomes_project 12 81274661 81275976 + protein_coding processed_transcript MGP_LPJ_T0035133.1 MGP_LPJ_G0019796.1 mouse_genomes_project 12 81274675 81277633 + protein_coding processed_transcript MGP_LPJ_T0035134.1 MGP_LPJ_G0019796.1 mouse_genomes_project 12 81274697 81276657 + MGP_LPJ_P0035134 protein_coding nonsense_mediated_decay MGP_LPJ_T0035135.1 MGP_LPJ_G0019796.1 mouse_genomes_project 12 81274706 81276099 + protein_coding processed_transcript MGP_LPJ_T0035136.1 MGP_LPJ_G0019796.1 mouse_genomes_project 12 81275503 81280989 + protein_coding retained_intron MGP_LPJ_T0034467.1 MGP_LPJ_G0019538.1 mouse_genomes_project 12 22877681 22879974 - MGP_LPJ_P0034467 Id2 protein_coding protein_coding MGP_LPJ_T0003416.1 MGP_LPJ_G0003138.1 mouse_genomes_project 12 69458405 69462626 + 4930512B01Rik antisense antisense MGP_LPJ_T0003417.1 MGP_LPJ_G0003138.1 mouse_genomes_project 12 69458452 69518652 + 4930512B01Rik antisense antisense MGP_LPJ_T0034750.1 MGP_LPJ_G0019651.1 mouse_genomes_project 12 54616890 54618548 + MGP_LPJ_P0034750 Aldoart2 protein_coding protein_coding MGP_LPJ_T0003427.1 MGP_LPJ_G0003147.1 mouse_genomes_project 12 83528336 83567122 - Gm29530 antisense antisense MGP_LPJ_T0000270.1 MGP_LPJ_G0000208.1 mouse_genomes_project 12 116286375 116286706 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0034741.1 MGP_LPJ_G0019647.1 mouse_genomes_project 12 54160030 54178478 + MGP_LPJ_P0034741 protein_coding protein_coding MGP_LPJ_T0034722.1 MGP_LPJ_G0019639.1 mouse_genomes_project 12 53754518 53801609 - MGP_LPJ_P0034722 Snx6 protein_coding protein_coding MGP_LPJ_T0034373.1 MGP_LPJ_G0019510.1 mouse_genomes_project 12 11558720 11563146 - MGP_LPJ_P0034373 Fam84a protein_coding protein_coding MGP_LPJ_T0035698.1 MGP_LPJ_G0019957.1 mouse_genomes_project 12 105164492 105175300 - MGP_LPJ_P0035698 Serpina10 protein_coding protein_coding MGP_LPJ_T0035699.1 MGP_LPJ_G0019957.1 mouse_genomes_project 12 105166315 105175277 - MGP_LPJ_P0035699 Serpina10 protein_coding protein_coding MGP_LPJ_T0000055.1 MGP_LPJ_G0000044.1 mouse_genomes_project 12 117257213 117257507 + MGP_LPJ_P0000055 Ighv1-13 IG_LV_gene IG_LV_gene MGP_LPJ_T0000284.1 MGP_LPJ_G0000222.1 mouse_genomes_project 12 116957028 116957319 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0000298.1 MGP_LPJ_G0000236.1 mouse_genomes_project 12 117667644 117668078 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0034421.1 MGP_LPJ_G0019524.1 mouse_genomes_project 12 18816840 18921254 + MGP_LPJ_P0034421 Asap2 protein_coding protein_coding MGP_LPJ_T0034422.1 MGP_LPJ_G0019524.1 mouse_genomes_project 12 18816840 18921254 + MGP_LPJ_P0034422 Asap2 protein_coding protein_coding MGP_LPJ_T0034423.1 MGP_LPJ_G0019524.1 mouse_genomes_project 12 18816840 18921254 + MGP_LPJ_P0034423 Asap2 protein_coding protein_coding MGP_LPJ_T0034424.1 MGP_LPJ_G0019524.1 mouse_genomes_project 12 18816840 18919294 + MGP_LPJ_P0034424 Asap2 protein_coding protein_coding MGP_LPJ_T0035751.1 MGP_LPJ_G0019989.1 mouse_genomes_project 12 106901332 106921383 + MGP_LPJ_P0035751 Tcl1b5 protein_coding protein_coding MGP_LPJ_T0034510.1 MGP_LPJ_G0019556.1 mouse_genomes_project 12 28891516 28901459 + MGP_LPJ_P0034510 Fam150b protein_coding protein_coding MGP_LPJ_T0035680.1 MGP_LPJ_G0019952.1 mouse_genomes_project 12 104934394 104952199 - MGP_LPJ_P0035680 Ddx24 protein_coding protein_coding MGP_LPJ_T0035681.1 MGP_LPJ_G0019952.1 mouse_genomes_project 12 104934394 104952286 - MGP_LPJ_P0035681 Ddx24 protein_coding protein_coding MGP_LPJ_T0034444.1 MGP_LPJ_G0019531.1 mouse_genomes_project 12 22222846 22304514 + MGP_LPJ_P0034444 Taf1b protein_coding protein_coding MGP_LPJ_T0006428.1 MGP_LPJ_G0005357.1 mouse_genomes_project 12 31042043 31076637 - 4933406C10Rik lincRNA lincRNA MGP_LPJ_T0006429.1 MGP_LPJ_G0005357.1 mouse_genomes_project 12 31047616 31076631 - 4933406C10Rik lincRNA lincRNA MGP_LPJ_T0000302.1 MGP_LPJ_G0000240.1 mouse_genomes_project 12 117923307 117923741 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0098986.1 MGP_LPJ_G0037249.1 mouse_genomes_project 12 67207414 67207600 + Gm26256 snRNA snRNA MGP_LPJ_T0000263.1 MGP_LPJ_G0000201.1 mouse_genomes_project 12 116096687 116097145 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0098997.1 MGP_LPJ_G0037260.1 mouse_genomes_project 12 81234686 81234793 + Gm23298 snRNA snRNA MGP_LPJ_T0034502.1 MGP_LPJ_G0019554.1 mouse_genomes_project 12 28148469 28358694 - MGP_LPJ_P0034502 Sntg2 protein_coding nonsense_mediated_decay MGP_LPJ_T0034503.1 MGP_LPJ_G0019554.1 mouse_genomes_project 12 28148470 28358741 - MGP_LPJ_P0034503 Sntg2 protein_coding protein_coding MGP_LPJ_T0034504.1 MGP_LPJ_G0019554.1 mouse_genomes_project 12 28148977 28358631 - MGP_LPJ_P0034504 Sntg2 protein_coding nonsense_mediated_decay MGP_LPJ_T0034505.1 MGP_LPJ_G0019554.1 mouse_genomes_project 12 28148982 28358694 - MGP_LPJ_P0034505 Sntg2 protein_coding nonsense_mediated_decay MGP_LPJ_T0034506.1 MGP_LPJ_G0019554.1 mouse_genomes_project 12 28165030 28171325 - Sntg2 protein_coding retained_intron MGP_LPJ_T0034507.1 MGP_LPJ_G0019554.1 mouse_genomes_project 12 28242660 28339437 - Sntg2 protein_coding processed_transcript MGP_LPJ_T0034508.1 MGP_LPJ_G0019554.1 mouse_genomes_project 12 28285079 28358709 - Sntg2 protein_coding processed_transcript MGP_LPJ_T0035964.1 MGP_LPJ_G0020054.1 mouse_genomes_project 12 114872144 114898371 + MGP_LPJ_P0035964 Inf2 protein_coding unknown_likely_coding MGP_LPJ_T0009874.1 MGP_LPJ_G0007992.1 mouse_genomes_project 12 111779379 111779460 + Mir758 miRNA miRNA MGP_LPJ_T0009867.1 MGP_LPJ_G0007985.1 mouse_genomes_project 12 111776744 111776826 + Mir411 miRNA miRNA MGP_LPJ_T0034376.1 MGP_LPJ_G0019512.1 mouse_genomes_project 12 14040886 14096964 - MGP_LPJ_P0034376 Lpin1 protein_coding protein_coding MGP_LPJ_T0034377.1 MGP_LPJ_G0019512.1 mouse_genomes_project 12 14040886 14096964 - MGP_LPJ_P0034377 Lpin1 protein_coding protein_coding MGP_LPJ_T0098959.1 MGP_LPJ_G0037222.1 mouse_genomes_project 12 1685128 1685235 + Gm22003 snRNA snRNA MGP_LPJ_T0034792.1 MGP_LPJ_G0019668.1 mouse_genomes_project 12 58278894 58299899 - MGP_LPJ_P0034792 Trappc6b protein_coding protein_coding MGP_LPJ_T0100233.1 MGP_LPJ_G0038496.1 mouse_genomes_project 12 103733349 103733564 - Gm25203 snoRNA snoRNA MGP_LPJ_T0012855.1 MGP_LPJ_G0010946.1 mouse_genomes_project 12 122972563 122973005 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000078.1 MGP_LPJ_G0000063.1 mouse_genomes_project 12 116594602 116595065 - MGP_LPJ_P0000078 Ighv11-1 IG_V_gene IG_V_gene MGP_LPJ_T0100242.1 MGP_LPJ_G0038505.1 mouse_genomes_project 12 111713787 111713859 + DQ267100 snoRNA snoRNA MGP_LPJ_T0012848.1 MGP_LPJ_G0010939.1 mouse_genomes_project 12 116872125 116872767 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100225.1 MGP_LPJ_G0038488.1 mouse_genomes_project 12 77964973 77965103 - Gm24070 snoRNA snoRNA MGP_LPJ_T0009903.1 MGP_LPJ_G0008021.1 mouse_genomes_project 12 111808974 111809064 + Mir541 miRNA miRNA MGP_LPJ_T0006425.1 MGP_LPJ_G0005354.1 mouse_genomes_project 12 28472769 28477031 - Gm28806 lincRNA lincRNA MGP_LPJ_T0034868.1 MGP_LPJ_G0019694.1 mouse_genomes_project 12 68934304 68938722 + Klhdc2 protein_coding retained_intron MGP_LPJ_T0034869.1 MGP_LPJ_G0019694.1 mouse_genomes_project 12 68934345 68948577 + MGP_LPJ_P0034869 Klhdc2 protein_coding protein_coding MGP_LPJ_T0034870.1 MGP_LPJ_G0019694.1 mouse_genomes_project 12 68934378 68946567 + Klhdc2 protein_coding retained_intron MGP_LPJ_T0034871.1 MGP_LPJ_G0019694.1 mouse_genomes_project 12 68940003 68946595 + Klhdc2 protein_coding retained_intron MGP_LPJ_T0009889.1 MGP_LPJ_G0008007.1 mouse_genomes_project 12 111793389 111793464 + Mir381 miRNA miRNA MGP_LPJ_T0101810.1 MGP_LPJ_G0039847.1 mouse_genomes_project 12 105355603 105374235 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0035622.1 MGP_LPJ_G0019932.1 mouse_genomes_project 12 103599584 103746958 + MGP_LPJ_P0035622 Slc24a4 protein_coding protein_coding MGP_LPJ_T0035623.1 MGP_LPJ_G0019932.1 mouse_genomes_project 12 103600025 103746616 + MGP_LPJ_P0035623 Slc24a4 protein_coding protein_coding MGP_LPJ_T0035624.1 MGP_LPJ_G0019932.1 mouse_genomes_project 12 103600242 103746508 + MGP_LPJ_P0035624 Slc24a4 protein_coding protein_coding MGP_LPJ_T0006457.1 MGP_LPJ_G0005380.1 mouse_genomes_project 12 86870945 86899710 + Gm805 lincRNA lincRNA MGP_LPJ_T0035965.1 MGP_LPJ_G0020055.1 mouse_genomes_project 12 114902812 114926700 + MGP_LPJ_P0035965 Adssl1 protein_coding protein_coding MGP_LPJ_T0035966.1 MGP_LPJ_G0020055.1 mouse_genomes_project 12 114902814 114926715 + MGP_LPJ_P0035966 Adssl1 protein_coding protein_coding MGP_LPJ_T0034909.1 MGP_LPJ_G0019709.1 mouse_genomes_project 12 69901955 69943696 - MGP_LPJ_P0034909 Pygl protein_coding protein_coding MGP_LPJ_T0034910.1 MGP_LPJ_G0019709.1 mouse_genomes_project 12 69908538 69908981 - Pygl protein_coding processed_transcript MGP_LPJ_T0034911.1 MGP_LPJ_G0019709.1 mouse_genomes_project 12 69923148 69943725 - Pygl protein_coding retained_intron MGP_LPJ_T0034912.1 MGP_LPJ_G0019709.1 mouse_genomes_project 12 69926619 69943458 - Pygl protein_coding processed_transcript MGP_LPJ_T0009890.1 MGP_LPJ_G0008008.1 mouse_genomes_project 12 111793900 111793982 + Mir487b miRNA miRNA MGP_LPJ_T0034480.1 MGP_LPJ_G0019545.1 mouse_genomes_project 12 26514818 26545566 - MGP_LPJ_P0034480 Colec11 protein_coding protein_coding MGP_LPJ_T0000143.1 MGP_LPJ_G0000105.1 mouse_genomes_project 12 118874473 118874940 - MGP_LPJ_P0000143 Ighv1-82 IG_V_gene IG_V_gene MGP_LPJ_T0000146.1 MGP_LPJ_G0000105.1 mouse_genomes_project 12 118874473 118874766 - MGP_LPJ_P0000146 Ighv1-82 IG_V_gene IG_V_gene MGP_LPJ_T0098148.1 MGP_LPJ_G0036429.1 mouse_genomes_project 12 107423789 107423918 + Gm22790 rRNA rRNA MGP_LPJ_T0098699.1 MGP_LPJ_G0036966.1 mouse_genomes_project 12 72842337 72864166 + Gm26709 sense_overlapping sense_overlapping MGP_LPJ_T0035959.1 MGP_LPJ_G0020050.1 mouse_genomes_project 12 114363968 114384859 + MGP_LPJ_P0035959 Aspg protein_coding protein_coding MGP_LPJ_T0100210.1 MGP_LPJ_G0038473.1 mouse_genomes_project 12 44592636 44592843 + Gm24948 snoRNA snoRNA MGP_LPJ_T0003431.1 MGP_LPJ_G0003151.1 mouse_genomes_project 12 91966025 91992830 + 5430427M07Rik antisense antisense MGP_LPJ_T0000141.1 MGP_LPJ_G0000103.1 mouse_genomes_project 12 118874473 118874931 - MGP_LPJ_P0000141 IG_V_gene IG_V_gene MGP_LPJ_T0000004.1 MGP_LPJ_G0000003.1 mouse_genomes_project 12 115594720 115600124 - MGP_LPJ_P0000004 Igha IG_C_gene IG_C_gene MGP_LPJ_T0000005.1 MGP_LPJ_G0000003.1 mouse_genomes_project 12 115598589 115600124 - MGP_LPJ_P0000005 Igha IG_C_gene IG_C_gene MGP_LPJ_T0035750.1 MGP_LPJ_G0019988.1 mouse_genomes_project 12 106884180 106954863 + MGP_LPJ_P0035750 Tcl1b1 protein_coding protein_coding MGP_LPJ_T0009822.1 MGP_LPJ_G0007940.1 mouse_genomes_project 12 80685273 80685338 - Mir1843a miRNA miRNA MGP_LPJ_T0099007.1 MGP_LPJ_G0037270.1 mouse_genomes_project 12 119387102 119387166 - Gm27649 snRNA snRNA MGP_LPJ_T0000025.1 MGP_LPJ_G0000019.1 mouse_genomes_project 12 115823550 115823560 - MGP_LPJ_P0000025 Ighd5-5 IG_D_gene IG_D_gene MGP_LPJ_T0012794.1 MGP_LPJ_G0010885.1 mouse_genomes_project 12 53706796 53707174 - processed_pseudogene processed_pseudogene MGP_LPJ_T0035001.1 MGP_LPJ_G0019741.1 mouse_genomes_project 12 73854527 73888295 + MGP_LPJ_P0035001 Hif1a protein_coding protein_coding MGP_LPJ_T0035002.1 MGP_LPJ_G0019741.1 mouse_genomes_project 12 73854913 73900722 + MGP_LPJ_P0035002 Hif1a protein_coding protein_coding MGP_LPJ_T0035003.1 MGP_LPJ_G0019741.1 mouse_genomes_project 12 73881794 73883726 + Hif1a protein_coding retained_intron MGP_LPJ_T0035004.1 MGP_LPJ_G0019741.1 mouse_genomes_project 12 73892882 73895086 + Hif1a protein_coding processed_transcript MGP_LPJ_T0034602.1 MGP_LPJ_G0019589.1 mouse_genomes_project 12 34286403 34291503 + Agr2 protein_coding retained_intron MGP_LPJ_T0034603.1 MGP_LPJ_G0019589.1 mouse_genomes_project 12 34286403 34298586 + MGP_LPJ_P0034603 Agr2 protein_coding protein_coding MGP_LPJ_T0034356.1 MGP_LPJ_G0019498.1 mouse_genomes_project 12 7610977 7615729 + MGP_LPJ_P0034356 Rdh14 protein_coding protein_coding MGP_LPJ_T0012785.1 MGP_LPJ_G0010876.1 mouse_genomes_project 12 796633 797152 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006521.1 MGP_LPJ_G0005418.1 mouse_genomes_project 12 113475441 113478043 + A230087F16Rik lincRNA lincRNA MGP_LPJ_T0006522.1 MGP_LPJ_G0005418.1 mouse_genomes_project 12 113475463 113484664 + A230087F16Rik lincRNA lincRNA MGP_LPJ_T0035079.1 MGP_LPJ_G0019768.1 mouse_genomes_project 12 77059354 77084276 - MGP_LPJ_P0035079 Max protein_coding protein_coding MGP_LPJ_T0035080.1 MGP_LPJ_G0019768.1 mouse_genomes_project 12 77059354 77084276 - MGP_LPJ_P0035080 Max protein_coding protein_coding MGP_LPJ_T0098981.1 MGP_LPJ_G0037244.1 mouse_genomes_project 12 58276177 58276368 + Gm22973 snRNA snRNA MGP_LPJ_T0009906.1 MGP_LPJ_G0008024.1 mouse_genomes_project 12 111809854 111809934 + Mir412 miRNA miRNA MGP_LPJ_T0006454.1 MGP_LPJ_G0005377.1 mouse_genomes_project 12 84143642 84144607 + Gm26623 lincRNA lincRNA MGP_LPJ_T0003406.1 MGP_LPJ_G0003130.1 mouse_genomes_project 12 38595230 38597680 + Gm17056 antisense antisense MGP_LPJ_T0035473.1 MGP_LPJ_G0019892.1 mouse_genomes_project 12 88788483 89108718 + MGP_LPJ_P0035473 protein_coding protein_coding MGP_LPJ_T0035403.1 MGP_LPJ_G0019872.1 mouse_genomes_project 12 87071686 87238331 + MGP_LPJ_P0035403 Esrrb protein_coding protein_coding MGP_LPJ_T0035404.1 MGP_LPJ_G0019872.1 mouse_genomes_project 12 87133683 87238328 + MGP_LPJ_P0035404 Esrrb protein_coding protein_coding MGP_LPJ_T0035405.1 MGP_LPJ_G0019872.1 mouse_genomes_project 12 87133683 87230768 + MGP_LPJ_P0035405 Esrrb protein_coding protein_coding MGP_LPJ_T0035406.1 MGP_LPJ_G0019872.1 mouse_genomes_project 12 87133922 87236503 + MGP_LPJ_P0035406 Esrrb protein_coding protein_coding MGP_LPJ_T0035407.1 MGP_LPJ_G0019872.1 mouse_genomes_project 12 87181913 87235768 + MGP_LPJ_P0035407 Esrrb protein_coding protein_coding MGP_LPJ_T0035408.1 MGP_LPJ_G0019872.1 mouse_genomes_project 12 87218107 87223666 + Esrrb protein_coding processed_transcript MGP_LPJ_T0000076.1 MGP_LPJ_G0000061.1 mouse_genomes_project 12 116538479 116538909 - MGP_LPJ_P0000076 Ighv14-2 IG_V_gene IG_V_gene MGP_LPJ_T0034897.1 MGP_LPJ_G0019705.1 mouse_genomes_project 12 69651166 69657825 + MGP_LPJ_P0034897 Gm3086 protein_coding protein_coding MGP_LPJ_T0035847.1 MGP_LPJ_G0020017.1 mouse_genomes_project 12 112394731 112396761 + MGP_LPJ_P0035847 protein_coding protein_coding MGP_LPJ_T0035848.1 MGP_LPJ_G0020017.1 mouse_genomes_project 12 112394923 112396372 + MGP_LPJ_P0035848 protein_coding protein_coding MGP_LPJ_T0035534.1 MGP_LPJ_G0019907.1 mouse_genomes_project 12 99638354 99801136 - MGP_LPJ_P0035534 Kcnk10 protein_coding protein_coding MGP_LPJ_T0006411.1 MGP_LPJ_G0005343.1 mouse_genomes_project 12 5881714 5888554 - Gm4755 lincRNA lincRNA MGP_LPJ_T0009910.1 MGP_LPJ_G0008028.1 mouse_genomes_project 12 112393711 112393793 - Mir1247 miRNA miRNA MGP_LPJ_T0006445.1 MGP_LPJ_G0005370.1 mouse_genomes_project 12 78372598 78384675 + lincRNA lincRNA MGP_LPJ_T0006446.1 MGP_LPJ_G0005370.1 mouse_genomes_project 12 78374087 78376462 + lincRNA lincRNA MGP_LPJ_T0006447.1 MGP_LPJ_G0005370.1 mouse_genomes_project 12 78376382 78384774 + lincRNA lincRNA MGP_LPJ_T0009865.1 MGP_LPJ_G0007983.1 mouse_genomes_project 12 111746348 111746425 + Mir882 miRNA miRNA MGP_LPJ_T0000128.1 MGP_LPJ_G0000096.1 mouse_genomes_project 12 118304913 118305356 - MGP_LPJ_P0000128 IG_V_gene IG_V_gene MGP_LPJ_T0000132.1 MGP_LPJ_G0000096.1 mouse_genomes_project 12 118304929 118305330 - MGP_LPJ_P0000132 IG_V_gene IG_V_gene MGP_LPJ_T0035752.1 MGP_LPJ_G0019990.1 mouse_genomes_project 12 106966441 106972429 - MGP_LPJ_P0035752 Tcl1 protein_coding protein_coding MGP_LPJ_T0035753.1 MGP_LPJ_G0019990.1 mouse_genomes_project 12 106966449 106972408 - MGP_LPJ_P0035753 Tcl1 protein_coding protein_coding MGP_LPJ_T0035754.1 MGP_LPJ_G0019990.1 mouse_genomes_project 12 106966999 106972398 - MGP_LPJ_P0035754 Tcl1 protein_coding protein_coding MGP_LPJ_T0035755.1 MGP_LPJ_G0019990.1 mouse_genomes_project 12 106967189 106972485 - MGP_LPJ_P0035755 Tcl1 protein_coding protein_coding MGP_LPJ_T0035756.1 MGP_LPJ_G0019990.1 mouse_genomes_project 12 106967285 106972388 - MGP_LPJ_P0035756 Tcl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0035757.1 MGP_LPJ_G0019990.1 mouse_genomes_project 12 106967981 106972317 - Tcl1 protein_coding processed_transcript MGP_LPJ_T0035168.1 MGP_LPJ_G0019806.1 mouse_genomes_project 12 81954595 81986998 - MGP_LPJ_P0035168 Med6 protein_coding protein_coding MGP_LPJ_T0035169.1 MGP_LPJ_G0019806.1 mouse_genomes_project 12 81954732 81955783 - Med6 protein_coding retained_intron MGP_LPJ_T0035170.1 MGP_LPJ_G0019806.1 mouse_genomes_project 12 81968000 81986988 - Med6 protein_coding retained_intron MGP_LPJ_T0035476.1 MGP_LPJ_G0019895.1 mouse_genomes_project 12 88903833 88919845 - MGP_LPJ_P0035476 Gm10436 protein_coding protein_coding MGP_LPJ_T0017246.1 MGP_LPJ_G0015148.1 mouse_genomes_project 12 92592480 92604072 - Gm8378 processed_transcript processed_transcript MGP_LPJ_T0017247.1 MGP_LPJ_G0015148.1 mouse_genomes_project 12 92600581 92604117 - Gm8378 processed_transcript processed_transcript MGP_LPJ_T0017248.1 MGP_LPJ_G0015148.1 mouse_genomes_project 12 92602469 92604117 - Gm8378 processed_transcript processed_transcript MGP_LPJ_T0035246.1 MGP_LPJ_G0019823.1 mouse_genomes_project 12 84561356 84569584 + MGP_LPJ_P0035246 protein_coding protein_coding MGP_LPJ_T0009913.1 MGP_LPJ_G0008031.1 mouse_genomes_project 12 114366535 114366595 - Mir3073b miRNA miRNA MGP_LPJ_T0012822.1 MGP_LPJ_G0010913.1 mouse_genomes_project 12 88827283 89108718 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101804.1 MGP_LPJ_G0039841.1 mouse_genomes_project 12 105261030 105266110 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0035416.1 MGP_LPJ_G0019875.1 mouse_genomes_project 12 87469697 87500308 + MGP_LPJ_P0035416 Lrrc74a protein_coding protein_coding MGP_LPJ_T0034585.1 MGP_LPJ_G0019578.1 mouse_genomes_project 12 31535804 31542220 + MGP_LPJ_P0034585 Efcab10 protein_coding protein_coding MGP_LPJ_T0035110.1 MGP_LPJ_G0019784.1 mouse_genomes_project 12 79448512 79527153 - MGP_LPJ_P0035110 Zfyve26 protein_coding protein_coding MGP_LPJ_T0000273.1 MGP_LPJ_G0000211.1 mouse_genomes_project 12 116409469 116409913 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0035006.1 MGP_LPJ_G0019743.1 mouse_genomes_project 12 73956548 74238174 + MGP_LPJ_P0035006 Syt16 protein_coding protein_coding MGP_LPJ_T0035007.1 MGP_LPJ_G0019743.1 mouse_genomes_project 12 74127429 74238170 + MGP_LPJ_P0035007 Syt16 protein_coding unknown_likely_coding MGP_LPJ_T0034873.1 MGP_LPJ_G0019696.1 mouse_genomes_project 12 69015026 69015640 - MGP_LPJ_P0034873 protein_coding protein_coding MGP_LPJ_T0034517.1 MGP_LPJ_G0019559.1 mouse_genomes_project 12 29093207 29099036 + MGP_LPJ_P0034517 Fam110c protein_coding protein_coding MGP_LPJ_T0035248.1 MGP_LPJ_G0019825.1 mouse_genomes_project 12 84590451 84599316 + MGP_LPJ_P0035248 Acot4 protein_coding protein_coding MGP_LPJ_T0035249.1 MGP_LPJ_G0019825.1 mouse_genomes_project 12 84590779 84596815 + Acot4 protein_coding retained_intron MGP_LPJ_T0035313.1 MGP_LPJ_G0019844.1 mouse_genomes_project 12 85288731 85311407 - MGP_LPJ_P0035313 Syndig1l protein_coding protein_coding MGP_LPJ_T0000081.1 MGP_LPJ_G0000066.1 mouse_genomes_project 12 116784604 116785034 - MGP_LPJ_P0000081 Ighv14-4 IG_V_gene IG_V_gene MGP_LPJ_T0000082.1 MGP_LPJ_G0000066.1 mouse_genomes_project 12 116784610 116785029 - MGP_LPJ_P0000082 Ighv14-4 IG_V_gene IG_V_gene MGP_LPJ_T0034319.1 MGP_LPJ_G0019490.1 mouse_genomes_project 12 5787673 5869399 + MGP_LPJ_P0034319 Pum2 protein_coding protein_coding MGP_LPJ_T0034320.1 MGP_LPJ_G0019490.1 mouse_genomes_project 12 5787673 5868272 + MGP_LPJ_P0034320 Pum2 protein_coding protein_coding MGP_LPJ_T0034321.1 MGP_LPJ_G0019490.1 mouse_genomes_project 12 5787684 5867138 + MGP_LPJ_P0034321 Pum2 protein_coding protein_coding MGP_LPJ_T0034322.1 MGP_LPJ_G0019490.1 mouse_genomes_project 12 5787763 5869379 + MGP_LPJ_P0034322 Pum2 protein_coding protein_coding MGP_LPJ_T0034323.1 MGP_LPJ_G0019490.1 mouse_genomes_project 12 5787798 5823524 + Pum2 protein_coding processed_transcript MGP_LPJ_T0034324.1 MGP_LPJ_G0019490.1 mouse_genomes_project 12 5787814 5869375 + MGP_LPJ_P0034324 Pum2 protein_coding nonsense_mediated_decay MGP_LPJ_T0034325.1 MGP_LPJ_G0019490.1 mouse_genomes_project 12 5787957 5869372 + MGP_LPJ_P0034325 Pum2 protein_coding unknown_likely_coding MGP_LPJ_T0034326.1 MGP_LPJ_G0019490.1 mouse_genomes_project 12 5787960 5866819 + MGP_LPJ_P0034326 Pum2 protein_coding protein_coding MGP_LPJ_T0034327.1 MGP_LPJ_G0019490.1 mouse_genomes_project 12 5788009 5866846 + MGP_LPJ_P0034327 Pum2 protein_coding protein_coding MGP_LPJ_T0034328.1 MGP_LPJ_G0019490.1 mouse_genomes_project 12 5788220 5869399 + MGP_LPJ_P0034328 Pum2 protein_coding protein_coding MGP_LPJ_T0034329.1 MGP_LPJ_G0019490.1 mouse_genomes_project 12 5788275 5829786 + MGP_LPJ_P0034329 Pum2 protein_coding protein_coding MGP_LPJ_T0034330.1 MGP_LPJ_G0019490.1 mouse_genomes_project 12 5788304 5829555 + MGP_LPJ_P0034330 Pum2 protein_coding protein_coding MGP_LPJ_T0034331.1 MGP_LPJ_G0019490.1 mouse_genomes_project 12 5791101 5825646 + MGP_LPJ_P0034331 Pum2 protein_coding protein_coding MGP_LPJ_T0034332.1 MGP_LPJ_G0019490.1 mouse_genomes_project 12 5814205 5830069 + MGP_LPJ_P0034332 Pum2 protein_coding nonsense_mediated_decay MGP_LPJ_T0034333.1 MGP_LPJ_G0019490.1 mouse_genomes_project 12 5826381 5837741 + MGP_LPJ_P0034333 Pum2 protein_coding protein_coding MGP_LPJ_T0034334.1 MGP_LPJ_G0019490.1 mouse_genomes_project 12 5845964 5865054 + MGP_LPJ_P0034334 Pum2 protein_coding protein_coding MGP_LPJ_T0034335.1 MGP_LPJ_G0019490.1 mouse_genomes_project 12 5860293 5861213 + Pum2 protein_coding retained_intron MGP_LPJ_T0006407.1 MGP_LPJ_G0005340.1 mouse_genomes_project 12 153486 167603 - Gm26520 lincRNA lincRNA MGP_LPJ_T0034587.1 MGP_LPJ_G0019580.1 mouse_genomes_project 12 32098843 32099729 + MGP_LPJ_P0034587 Ferd3l protein_coding protein_coding MGP_LPJ_T0009839.1 MGP_LPJ_G0007957.1 mouse_genomes_project 12 107657548 107657618 - Gm22120 miRNA miRNA MGP_LPJ_T0000109.1 MGP_LPJ_G0000085.1 mouse_genomes_project 12 117148764 117149229 - MGP_LPJ_P0000109 Ighv10-3 IG_V_gene IG_V_gene MGP_LPJ_T0000105.1 MGP_LPJ_G0000082.1 mouse_genomes_project 12 117105738 117106172 - MGP_LPJ_P0000105 Ighv1-4 IG_V_gene IG_V_gene MGP_LPJ_T0034783.1 MGP_LPJ_G0019665.1 mouse_genomes_project 12 57448451 57452990 - MGP_LPJ_P0034783 Clec14a protein_coding protein_coding MGP_LPJ_T0003429.1 MGP_LPJ_G0003149.1 mouse_genomes_project 12 85539280 85540371 + Gm17139 antisense antisense MGP_LPJ_T0100212.1 MGP_LPJ_G0038475.1 mouse_genomes_project 12 49881079 49881196 + Gm22088 snoRNA snoRNA MGP_LPJ_T0034739.1 MGP_LPJ_G0019645.1 mouse_genomes_project 12 54103434 54144991 + MGP_LPJ_P0034739 protein_coding protein_coding MGP_LPJ_T0098988.1 MGP_LPJ_G0037251.1 mouse_genomes_project 12 69230066 69230172 - Gm24449 snRNA snRNA MGP_LPJ_T0100240.1 MGP_LPJ_G0038503.1 mouse_genomes_project 12 111703884 111703955 + Gm23600 snoRNA snoRNA MGP_LPJ_T0034430.1 MGP_LPJ_G0019526.1 mouse_genomes_project 12 18939192 18969912 + MGP_LPJ_P0034430 Cpsf3 protein_coding protein_coding MGP_LPJ_T0000290.1 MGP_LPJ_G0000228.1 mouse_genomes_project 12 117257213 117257645 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0034302.1 MGP_LPJ_G0019481.1 mouse_genomes_project 12 1801223 1831744 - MGP_LPJ_P0034302 Ubxn2a protein_coding protein_coding MGP_LPJ_T0034303.1 MGP_LPJ_G0019481.1 mouse_genomes_project 12 1801540 1831303 - MGP_LPJ_P0034303 Ubxn2a protein_coding protein_coding MGP_LPJ_T0034304.1 MGP_LPJ_G0019481.1 mouse_genomes_project 12 1803021 1831478 - MGP_LPJ_P0034304 Ubxn2a protein_coding nonsense_mediated_decay MGP_LPJ_T0098966.1 MGP_LPJ_G0037229.1 mouse_genomes_project 12 19011010 19011109 + Gm22766 snRNA snRNA MGP_LPJ_T0003425.1 MGP_LPJ_G0003145.1 mouse_genomes_project 12 81969919 81971761 + Gm16572 antisense antisense MGP_LPJ_T0100224.1 MGP_LPJ_G0038487.1 mouse_genomes_project 12 73059444 73059576 - Gm23910 snoRNA snoRNA MGP_LPJ_T0006451.1 MGP_LPJ_G0005374.1 mouse_genomes_project 12 81071214 81074076 + Gm26796 lincRNA lincRNA MGP_LPJ_T0006438.1 MGP_LPJ_G0005365.1 mouse_genomes_project 12 69526762 69532705 + 4931403G20Rik lincRNA lincRNA MGP_LPJ_T0035433.1 MGP_LPJ_G0019879.1 mouse_genomes_project 12 87866983 87871957 - MGP_LPJ_P0035433 Ngb protein_coding protein_coding MGP_LPJ_T0035434.1 MGP_LPJ_G0019879.1 mouse_genomes_project 12 87866983 87871940 - MGP_LPJ_P0035434 Ngb protein_coding protein_coding MGP_LPJ_T0035435.1 MGP_LPJ_G0019879.1 mouse_genomes_project 12 87867477 87871768 - MGP_LPJ_P0035435 Ngb protein_coding protein_coding MGP_LPJ_T0035766.1 MGP_LPJ_G0019996.1 mouse_genomes_project 12 107485285 107569463 + MGP_LPJ_P0035766 Ak7 protein_coding protein_coding MGP_LPJ_T0035746.1 MGP_LPJ_G0019985.1 mouse_genomes_project 12 106744390 106752612 + MGP_LPJ_P0035746 Glrx5 protein_coding protein_coding MGP_LPJ_T0009815.1 MGP_LPJ_G0007933.1 mouse_genomes_project 12 69204626 69204735 - Gm23018 miRNA miRNA MGP_LPJ_T0035593.1 MGP_LPJ_G0019923.1 mouse_genomes_project 12 102218725 102252535 - MGP_LPJ_P0035593 Gpr68 protein_coding protein_coding MGP_LPJ_T0035594.1 MGP_LPJ_G0019923.1 mouse_genomes_project 12 102218728 102252518 - MGP_LPJ_P0035594 Gpr68 protein_coding protein_coding MGP_LPJ_T0035595.1 MGP_LPJ_G0019923.1 mouse_genomes_project 12 102218728 102242682 - MGP_LPJ_P0035595 Gpr68 protein_coding protein_coding MGP_LPJ_T0035596.1 MGP_LPJ_G0019923.1 mouse_genomes_project 12 102221369 102242656 - Gpr68 protein_coding processed_transcript MGP_LPJ_T0035598.1 MGP_LPJ_G0019923.1 mouse_genomes_project 12 102229351 102252535 - Gpr68 protein_coding processed_transcript MGP_LPJ_T0035599.1 MGP_LPJ_G0019923.1 mouse_genomes_project 12 102229539 102242682 - Gpr68 protein_coding processed_transcript MGP_LPJ_T0100238.1 MGP_LPJ_G0038501.1 mouse_genomes_project 12 111696148 111696221 + AF357425 snoRNA snoRNA MGP_LPJ_T0035963.1 MGP_LPJ_G0020053.1 mouse_genomes_project 12 114780745 114793225 - MGP_LPJ_P0035963 Tmem179 protein_coding protein_coding MGP_LPJ_T0009884.1 MGP_LPJ_G0008002.1 mouse_genomes_project 12 111789785 111789869 + Mir654 miRNA miRNA MGP_LPJ_T0034716.1 MGP_LPJ_G0019636.1 mouse_genomes_project 12 53143543 53169702 - MGP_LPJ_P0034716 Egln3 protein_coding protein_coding MGP_LPJ_T0098964.1 MGP_LPJ_G0037227.1 mouse_genomes_project 12 11921043 11921150 + Gm25414 snRNA snRNA MGP_LPJ_T0006448.1 MGP_LPJ_G0005371.1 mouse_genomes_project 12 80379506 80384984 + Gm26669 lincRNA lincRNA MGP_LPJ_T0003433.1 MGP_LPJ_G0003153.1 mouse_genomes_project 12 100594574 100617816 + 3300002A11Rik antisense antisense MGP_LPJ_T0003434.1 MGP_LPJ_G0003153.1 mouse_genomes_project 12 100599759 100617816 + 3300002A11Rik antisense antisense MGP_LPJ_T0034418.1 MGP_LPJ_G0019522.1 mouse_genomes_project 12 14895001 14981065 + MGP_LPJ_P0034418 Nol10 protein_coding protein_coding MGP_LPJ_T0035692.1 MGP_LPJ_G0019955.1 mouse_genomes_project 12 104981671 104995695 - MGP_LPJ_P0035692 Ifi27l2b protein_coding protein_coding MGP_LPJ_T0034749.1 MGP_LPJ_G0019650.1 mouse_genomes_project 12 54533799 54538637 - MGP_LPJ_P0034749 Nfkbia protein_coding protein_coding MGP_LPJ_T0006491.1 MGP_LPJ_G0005409.1 mouse_genomes_project 12 110543622 110563665 - Gm16596 lincRNA lincRNA MGP_LPJ_T0035056.1 MGP_LPJ_G0019761.1 mouse_genomes_project 12 76534078 76540855 + MGP_LPJ_P0035056 Gm10451 protein_coding protein_coding MGP_LPJ_T0012843.1 MGP_LPJ_G0010934.1 mouse_genomes_project 12 115489176 115489996 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000268.1 MGP_LPJ_G0000206.1 mouse_genomes_project 12 116146648 116147559 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0035263.1 MGP_LPJ_G0019831.1 mouse_genomes_project 12 84717739 84788722 - MGP_LPJ_P0035263 Elmsan1 protein_coding protein_coding MGP_LPJ_T0035264.1 MGP_LPJ_G0019831.1 mouse_genomes_project 12 84717841 84763238 - MGP_LPJ_P0035264 Elmsan1 protein_coding protein_coding MGP_LPJ_T0035265.1 MGP_LPJ_G0019831.1 mouse_genomes_project 12 84721508 84724483 - Elmsan1 protein_coding processed_transcript MGP_LPJ_T0035266.1 MGP_LPJ_G0019831.1 mouse_genomes_project 12 84725778 84729385 - Elmsan1 protein_coding processed_transcript MGP_LPJ_T0006470.1 MGP_LPJ_G0005393.1 mouse_genomes_project 12 104215248 104224857 - Gm21971 lincRNA lincRNA MGP_LPJ_T0000297.1 MGP_LPJ_G0000235.1 mouse_genomes_project 12 117660969 117661403 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0034717.1 MGP_LPJ_G0019637.1 mouse_genomes_project 12 53640041 53651243 - MGP_LPJ_P0034717 Sptssa protein_coding protein_coding MGP_LPJ_T0012827.1 MGP_LPJ_G0010918.1 mouse_genomes_project 12 100483245 100483496 + processed_pseudogene processed_pseudogene MGP_LPJ_T0035209.1 MGP_LPJ_G0019816.1 mouse_genomes_project 12 84148531 84196687 + MGP_LPJ_P0035209 Rbm25 protein_coding protein_coding MGP_LPJ_T0035210.1 MGP_LPJ_G0019816.1 mouse_genomes_project 12 84151809 84167863 + MGP_LPJ_P0035210 Rbm25 protein_coding protein_coding MGP_LPJ_T0035211.1 MGP_LPJ_G0019816.1 mouse_genomes_project 12 84152722 84205392 + MGP_LPJ_P0035211 Rbm25 protein_coding protein_coding MGP_LPJ_T0035212.1 MGP_LPJ_G0019816.1 mouse_genomes_project 12 84152723 84173643 + MGP_LPJ_P0035212 Rbm25 protein_coding protein_coding MGP_LPJ_T0035213.1 MGP_LPJ_G0019816.1 mouse_genomes_project 12 84152727 84167861 + MGP_LPJ_P0035213 Rbm25 protein_coding protein_coding MGP_LPJ_T0035214.1 MGP_LPJ_G0019816.1 mouse_genomes_project 12 84152761 84181734 + MGP_LPJ_P0035214 Rbm25 protein_coding protein_coding MGP_LPJ_T0035215.1 MGP_LPJ_G0019816.1 mouse_genomes_project 12 84152776 84164329 + MGP_LPJ_P0035215 Rbm25 protein_coding protein_coding MGP_LPJ_T0035216.1 MGP_LPJ_G0019816.1 mouse_genomes_project 12 84152796 84186269 + MGP_LPJ_P0035216 Rbm25 protein_coding nonsense_mediated_decay MGP_LPJ_T0035217.1 MGP_LPJ_G0019816.1 mouse_genomes_project 12 84156396 84161004 + Rbm25 protein_coding retained_intron MGP_LPJ_T0035218.1 MGP_LPJ_G0019816.1 mouse_genomes_project 12 84164184 84173662 + Rbm25 protein_coding retained_intron MGP_LPJ_T0035219.1 MGP_LPJ_G0019816.1 mouse_genomes_project 12 84164269 84204289 + MGP_LPJ_P0035219 Rbm25 protein_coding nonsense_mediated_decay MGP_LPJ_T0035220.1 MGP_LPJ_G0019816.1 mouse_genomes_project 12 84164329 84190753 + Rbm25 protein_coding retained_intron MGP_LPJ_T0035221.1 MGP_LPJ_G0019816.1 mouse_genomes_project 12 84167812 84174022 + Rbm25 protein_coding processed_transcript MGP_LPJ_T0035222.1 MGP_LPJ_G0019816.1 mouse_genomes_project 12 84170581 84174379 + Rbm25 protein_coding retained_intron MGP_LPJ_T0035223.1 MGP_LPJ_G0019816.1 mouse_genomes_project 12 84180794 84181854 + Rbm25 protein_coding retained_intron MGP_LPJ_T0035224.1 MGP_LPJ_G0019816.1 mouse_genomes_project 12 84185245 84186269 + Rbm25 protein_coding processed_transcript MGP_LPJ_T0035225.1 MGP_LPJ_G0019816.1 mouse_genomes_project 12 84196794 84198381 + Rbm25 protein_coding processed_transcript MGP_LPJ_T0035226.1 MGP_LPJ_G0019816.1 mouse_genomes_project 12 84197122 84200168 + Rbm25 protein_coding retained_intron MGP_LPJ_T0000008.1 MGP_LPJ_G0000006.1 mouse_genomes_project 12 115661970 115663619 - MGP_LPJ_P0000008 Ighg2b IG_C_gene IG_C_gene MGP_LPJ_T0034971.1 MGP_LPJ_G0019729.1 mouse_genomes_project 12 72491206 72505549 - MGP_LPJ_P0034971 Dhrs7 protein_coding protein_coding MGP_LPJ_T0000905.1 MGP_LPJ_G0000834.1 mouse_genomes_project 12 114989612 114992215 - TEC TEC MGP_LPJ_T0035960.1 MGP_LPJ_G0020051.1 mouse_genomes_project 12 114403479 114440565 + MGP_LPJ_P0035960 Kif26a protein_coding protein_coding MGP_LPJ_T0035961.1 MGP_LPJ_G0020051.1 mouse_genomes_project 12 114436457 114437837 + Kif26a protein_coding processed_transcript MGP_LPJ_T0100208.1 MGP_LPJ_G0038471.1 mouse_genomes_project 12 42272581 42272710 + Gm26326 snoRNA snoRNA MGP_LPJ_T0035643.1 MGP_LPJ_G0019939.1 mouse_genomes_project 12 104239943 104256905 - MGP_LPJ_P0035643 Gm20604 protein_coding protein_coding MGP_LPJ_T0006519.1 MGP_LPJ_G0005416.1 mouse_genomes_project 12 113011988 113014764 + 4921507G05Rik lincRNA lincRNA MGP_LPJ_T0006475.1 MGP_LPJ_G0005397.1 mouse_genomes_project 12 108280546 108286605 - 1700121N20Rik lincRNA lincRNA MGP_LPJ_T0009923.1 MGP_LPJ_G0008041.1 mouse_genomes_project 12 119042268 119042389 - Gm44372 miRNA miRNA MGP_LPJ_T0034997.1 MGP_LPJ_G0019738.1 mouse_genomes_project 12 73278860 73287482 - MGP_LPJ_P0034997 D830013O20Rik protein_coding protein_coding MGP_LPJ_T0035207.1 MGP_LPJ_G0019814.1 mouse_genomes_project 12 84032771 84055814 + MGP_LPJ_P0035207 Dcaf4 protein_coding protein_coding MGP_LPJ_T0034544.1 MGP_LPJ_G0019569.1 mouse_genomes_project 12 29771682 29778742 - MGP_LPJ_P0034544 Gpr22 protein_coding protein_coding MGP_LPJ_T0034545.1 MGP_LPJ_G0019569.1 mouse_genomes_project 12 29773527 29778763 - MGP_LPJ_P0034545 Gpr22 protein_coding protein_coding MGP_LPJ_T0034546.1 MGP_LPJ_G0019569.1 mouse_genomes_project 12 29774264 29778749 - MGP_LPJ_P0034546 Gpr22 protein_coding protein_coding MGP_LPJ_T0011353.1 MGP_LPJ_G0009471.1 mouse_genomes_project 12 104641457 104641619 + Gm27976 misc_RNA misc_RNA MGP_LPJ_T0035740.1 MGP_LPJ_G0019980.1 mouse_genomes_project 12 106143013 106146005 + MGP_LPJ_P0035740 Gm1000 protein_coding protein_coding MGP_LPJ_T0034604.1 MGP_LPJ_G0019590.1 mouse_genomes_project 12 34309098 34343108 - MGP_LPJ_P0034604 Tspan13 protein_coding protein_coding MGP_LPJ_T0034605.1 MGP_LPJ_G0019590.1 mouse_genomes_project 12 34317341 34343119 - MGP_LPJ_P0034605 Tspan13 protein_coding nonsense_mediated_decay MGP_LPJ_T0034606.1 MGP_LPJ_G0019590.1 mouse_genomes_project 12 34317352 34340554 - MGP_LPJ_P0034606 Tspan13 protein_coding protein_coding MGP_LPJ_T0035374.1 MGP_LPJ_G0019866.1 mouse_genomes_project 12 86424646 86496328 + MGP_LPJ_P0035374 Mfsd7c protein_coding protein_coding MGP_LPJ_T0098136.1 MGP_LPJ_G0036417.1 mouse_genomes_project 12 43940130 43940214 + Gm22076 rRNA rRNA MGP_LPJ_T0003421.1 MGP_LPJ_G0003141.1 mouse_genomes_project 12 80235640 80235945 + Gm28056 antisense antisense MGP_LPJ_T0100227.1 MGP_LPJ_G0038490.1 mouse_genomes_project 12 83232388 83232525 - Gm22149 snoRNA snoRNA MGP_LPJ_T0000904.1 MGP_LPJ_G0000833.1 mouse_genomes_project 12 114616187 114618934 - TEC TEC MGP_LPJ_T0000064.1 MGP_LPJ_G0000052.1 mouse_genomes_project 12 116332507 116332946 - MGP_LPJ_P0000064 Ighv2-7 IG_V_gene IG_V_gene MGP_LPJ_T0003403.1 MGP_LPJ_G0003127.1 mouse_genomes_project 12 29531328 29532260 + Gm29542 antisense antisense MGP_LPJ_T0035347.1 MGP_LPJ_G0019854.1 mouse_genomes_project 12 85770812 85786503 - MGP_LPJ_P0035347 Rps6kl1 protein_coding protein_coding MGP_LPJ_T0100256.1 MGP_LPJ_G0038519.1 mouse_genomes_project 12 111751252 111751324 + Gm25854 snoRNA snoRNA MGP_LPJ_T0012847.1 MGP_LPJ_G0010938.1 mouse_genomes_project 12 116797770 116798082 - processed_pseudogene processed_pseudogene MGP_LPJ_T0009824.1 MGP_LPJ_G0007942.1 mouse_genomes_project 12 85889908 85889971 - Mir6938 miRNA miRNA MGP_LPJ_T0100231.1 MGP_LPJ_G0038494.1 mouse_genomes_project 12 92484142 92484285 - Gm25776 snoRNA snoRNA MGP_LPJ_T0009915.1 MGP_LPJ_G0008033.1 mouse_genomes_project 12 114952089 114952164 - Mir6939 miRNA miRNA MGP_LPJ_T0035682.1 MGP_LPJ_G0019953.1 mouse_genomes_project 12 104960629 104967765 + MGP_LPJ_P0035682 Ifi27 protein_coding protein_coding MGP_LPJ_T0035683.1 MGP_LPJ_G0019953.1 mouse_genomes_project 12 104960629 104967765 + MGP_LPJ_P0035683 Ifi27 protein_coding protein_coding MGP_LPJ_T0035684.1 MGP_LPJ_G0019953.1 mouse_genomes_project 12 104960629 104967765 + MGP_LPJ_P0035684 Ifi27 protein_coding protein_coding MGP_LPJ_T0035685.1 MGP_LPJ_G0019953.1 mouse_genomes_project 12 104960630 104967797 + MGP_LPJ_P0035685 Ifi27 protein_coding protein_coding MGP_LPJ_T0035686.1 MGP_LPJ_G0019953.1 mouse_genomes_project 12 104960663 104965194 + Ifi27 protein_coding retained_intron MGP_LPJ_T0035687.1 MGP_LPJ_G0019953.1 mouse_genomes_project 12 104960677 104967797 + MGP_LPJ_P0035687 Ifi27 protein_coding protein_coding MGP_LPJ_T0035688.1 MGP_LPJ_G0019953.1 mouse_genomes_project 12 104960703 104964531 + Ifi27 protein_coding retained_intron MGP_LPJ_T0035689.1 MGP_LPJ_G0019953.1 mouse_genomes_project 12 104960710 104965086 + MGP_LPJ_P0035689 Ifi27 protein_coding protein_coding MGP_LPJ_T0035690.1 MGP_LPJ_G0019953.1 mouse_genomes_project 12 104965184 104967797 + Ifi27 protein_coding retained_intron MGP_LPJ_T0035650.1 MGP_LPJ_G0019944.1 mouse_genomes_project 12 104283717 104377266 - MGP_LPJ_P0035650 Btbd7 protein_coding protein_coding MGP_LPJ_T0098132.1 MGP_LPJ_G0036413.1 mouse_genomes_project 12 10008838 10008943 - Gm27952 rRNA rRNA MGP_LPJ_T0098134.1 MGP_LPJ_G0036415.1 mouse_genomes_project 12 25960048 25960186 - Gm25923 rRNA rRNA MGP_LPJ_T0035021.1 MGP_LPJ_G0019752.1 mouse_genomes_project 12 75867447 75933823 + MGP_LPJ_P0035021 Syne2 protein_coding protein_coding MGP_LPJ_T0035022.1 MGP_LPJ_G0019752.1 mouse_genomes_project 12 75867630 76178783 + MGP_LPJ_P0035022 Syne2 protein_coding protein_coding MGP_LPJ_T0035023.1 MGP_LPJ_G0019752.1 mouse_genomes_project 12 75867630 76178808 + MGP_LPJ_P0035023 Syne2 protein_coding protein_coding MGP_LPJ_T0035024.1 MGP_LPJ_G0019752.1 mouse_genomes_project 12 75867635 75946408 + Syne2 protein_coding retained_intron MGP_LPJ_T0035025.1 MGP_LPJ_G0019752.1 mouse_genomes_project 12 75867641 75964152 + MGP_LPJ_P0035025 Syne2 protein_coding protein_coding MGP_LPJ_T0035026.1 MGP_LPJ_G0019752.1 mouse_genomes_project 12 75867662 75961179 + Syne2 protein_coding retained_intron MGP_LPJ_T0035027.1 MGP_LPJ_G0019752.1 mouse_genomes_project 12 75901933 75933645 + MGP_LPJ_P0035027 Syne2 protein_coding protein_coding MGP_LPJ_T0035028.1 MGP_LPJ_G0019752.1 mouse_genomes_project 12 75964489 75970271 + Syne2 protein_coding retained_intron MGP_LPJ_T0035029.1 MGP_LPJ_G0019752.1 mouse_genomes_project 12 76085468 76090987 + MGP_LPJ_P0035029 Syne2 protein_coding protein_coding MGP_LPJ_T0035030.1 MGP_LPJ_G0019752.1 mouse_genomes_project 12 76094809 76178803 + MGP_LPJ_P0035030 Syne2 protein_coding protein_coding MGP_LPJ_T0035031.1 MGP_LPJ_G0019752.1 mouse_genomes_project 12 76112765 76178783 + MGP_LPJ_P0035031 Syne2 protein_coding protein_coding MGP_LPJ_T0035032.1 MGP_LPJ_G0019752.1 mouse_genomes_project 12 76125259 76132104 + Syne2 protein_coding retained_intron MGP_LPJ_T0035033.1 MGP_LPJ_G0019752.1 mouse_genomes_project 12 76138494 76162029 + MGP_LPJ_P0035033 Syne2 protein_coding protein_coding MGP_LPJ_T0035034.1 MGP_LPJ_G0019752.1 mouse_genomes_project 12 76149080 76162639 + MGP_LPJ_P0035034 Syne2 protein_coding protein_coding MGP_LPJ_T0035035.1 MGP_LPJ_G0019752.1 mouse_genomes_project 12 76149363 76165573 + MGP_LPJ_P0035035 Syne2 protein_coding nonsense_mediated_decay MGP_LPJ_T0035036.1 MGP_LPJ_G0019752.1 mouse_genomes_project 12 76155208 76178808 + MGP_LPJ_P0035036 Syne2 protein_coding nonsense_mediated_decay MGP_LPJ_T0035037.1 MGP_LPJ_G0019752.1 mouse_genomes_project 12 76168517 76173875 + Syne2 protein_coding retained_intron MGP_LPJ_T0098987.1 MGP_LPJ_G0037250.1 mouse_genomes_project 12 68773398 68773502 - Gm24499 snRNA snRNA MGP_LPJ_T0035871.1 MGP_LPJ_G0020023.1 mouse_genomes_project 12 112973931 113011899 - Mok protein_coding retained_intron MGP_LPJ_T0035872.1 MGP_LPJ_G0020023.1 mouse_genomes_project 12 112973931 113011890 - MGP_LPJ_P0035872 Mok protein_coding protein_coding MGP_LPJ_T0035873.1 MGP_LPJ_G0020023.1 mouse_genomes_project 12 112973931 113011899 - MGP_LPJ_P0035873 Mok protein_coding protein_coding MGP_LPJ_T0035874.1 MGP_LPJ_G0020023.1 mouse_genomes_project 12 112974174 113011712 - MGP_LPJ_P0035874 Mok protein_coding unknown_likely_coding MGP_LPJ_T0035875.1 MGP_LPJ_G0020023.1 mouse_genomes_project 12 112980975 113011887 - MGP_LPJ_P0035875 Mok protein_coding protein_coding MGP_LPJ_T0101809.1 MGP_LPJ_G0039846.1 mouse_genomes_project 12 105355603 105374235 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0009880.1 MGP_LPJ_G0007998.1 mouse_genomes_project 12 111783827 111783903 + Mir543 miRNA miRNA MGP_LPJ_T0000077.1 MGP_LPJ_G0000062.1 mouse_genomes_project 12 116594602 116595173 - MGP_LPJ_P0000077 IG_V_gene IG_V_gene MGP_LPJ_T0035604.1 MGP_LPJ_G0019926.1 mouse_genomes_project 12 102835803 103084354 + MGP_LPJ_P0035604 Catsperb protein_coding protein_coding MGP_LPJ_T0009821.1 MGP_LPJ_G0007939.1 mouse_genomes_project 12 77251515 77251583 - Gm22696 miRNA miRNA MGP_LPJ_T0003420.1 MGP_LPJ_G0003140.1 mouse_genomes_project 12 74195631 74208880 - Gm29587 antisense antisense MGP_LPJ_T0035365.1 MGP_LPJ_G0019862.1 mouse_genomes_project 12 86082429 86086172 + MGP_LPJ_P0035365 protein_coding protein_coding MGP_LPJ_T0034308.1 MGP_LPJ_G0019484.1 mouse_genomes_project 12 5050148 5060268 + MGP_LPJ_P0034308 Apob protein_coding protein_coding MGP_LPJ_T0034309.1 MGP_LPJ_G0019484.1 mouse_genomes_project 12 5050148 5089700 + MGP_LPJ_P0034309 Apob protein_coding protein_coding MGP_LPJ_T0034310.1 MGP_LPJ_G0019484.1 mouse_genomes_project 12 5050279 5089365 + MGP_LPJ_P0034310 Apob protein_coding protein_coding MGP_LPJ_T0034311.1 MGP_LPJ_G0019484.1 mouse_genomes_project 12 5085223 5089700 + MGP_LPJ_P0034311 Apob protein_coding protein_coding MGP_LPJ_T0100196.1 MGP_LPJ_G0038459.1 mouse_genomes_project 12 18940821 18940955 + Gm25821 snoRNA snoRNA MGP_LPJ_T0011347.1 MGP_LPJ_G0009465.1 mouse_genomes_project 12 71524620 71524922 + Gm22959 misc_RNA misc_RNA MGP_LPJ_T0034287.1 MGP_LPJ_G0019475.1 mouse_genomes_project 12 1676539 1694753 - MGP_LPJ_P0034287 Fam228b protein_coding protein_coding MGP_LPJ_T0000125.1 MGP_LPJ_G0000094.1 mouse_genomes_project 12 117757629 117757923 - MGP_LPJ_P0000125 Ighv1-49 IG_V_gene IG_V_gene MGP_LPJ_T0000126.1 MGP_LPJ_G0000094.1 mouse_genomes_project 12 117757629 117757926 - MGP_LPJ_P0000126 Ighv1-49 IG_V_gene IG_V_gene MGP_LPJ_T0012838.1 MGP_LPJ_G0010929.1 mouse_genomes_project 12 108751973 108752454 - processed_pseudogene processed_pseudogene MGP_LPJ_T0034948.1 MGP_LPJ_G0019723.1 mouse_genomes_project 12 71918422 71927626 + MGP_LPJ_P0034948 Jkamp protein_coding protein_coding MGP_LPJ_T0034949.1 MGP_LPJ_G0019723.1 mouse_genomes_project 12 71918622 71926774 + Jkamp protein_coding processed_transcript MGP_LPJ_T0034950.1 MGP_LPJ_G0019723.1 mouse_genomes_project 12 71918690 71936082 + MGP_LPJ_P0034950 Jkamp protein_coding protein_coding MGP_LPJ_T0034951.1 MGP_LPJ_G0019723.1 mouse_genomes_project 12 71918690 71936682 + MGP_LPJ_P0034951 Jkamp protein_coding protein_coding MGP_LPJ_T0034952.1 MGP_LPJ_G0019723.1 mouse_genomes_project 12 71921948 71927626 + Jkamp protein_coding retained_intron MGP_LPJ_T0034953.1 MGP_LPJ_G0019723.1 mouse_genomes_project 12 71922489 71927500 + Jkamp protein_coding retained_intron MGP_LPJ_T0034954.1 MGP_LPJ_G0019723.1 mouse_genomes_project 12 71935013 71936078 + Jkamp protein_coding retained_intron MGP_LPJ_T0034509.1 MGP_LPJ_G0019555.1 mouse_genomes_project 12 28590992 28597742 + MGP_LPJ_P0034509 Tmem18 protein_coding protein_coding MGP_LPJ_T0009827.1 MGP_LPJ_G0007945.1 mouse_genomes_project 12 88047481 88047557 + miRNA miRNA MGP_LPJ_T0009897.1 MGP_LPJ_G0008015.1 mouse_genomes_project 12 111801299 111801365 + Mir668 miRNA miRNA MGP_LPJ_T0035605.1 MGP_LPJ_G0019927.1 mouse_genomes_project 12 103100993 103177455 - MGP_LPJ_P0035605 Tc2n protein_coding protein_coding MGP_LPJ_T0035606.1 MGP_LPJ_G0019927.1 mouse_genomes_project 12 103102106 103170947 - MGP_LPJ_P0035606 Tc2n protein_coding nonsense_mediated_decay MGP_LPJ_T0035607.1 MGP_LPJ_G0019927.1 mouse_genomes_project 12 103104593 103168713 - MGP_LPJ_P0035607 Tc2n protein_coding protein_coding MGP_LPJ_T0035608.1 MGP_LPJ_G0019927.1 mouse_genomes_project 12 103104640 103170781 - MGP_LPJ_P0035608 Tc2n protein_coding protein_coding MGP_LPJ_T0003442.1 MGP_LPJ_G0003160.1 mouse_genomes_project 12 112809628 112810145 - Gm17111 antisense antisense MGP_LPJ_T0034292.1 MGP_LPJ_G0019479.1 mouse_genomes_project 12 1760522 1770091 + MGP_LPJ_P0034292 BC068281 protein_coding protein_coding MGP_LPJ_T0034293.1 MGP_LPJ_G0019479.1 mouse_genomes_project 12 1767323 1775566 + MGP_LPJ_P0034293 BC068281 protein_coding protein_coding MGP_LPJ_T0034872.1 MGP_LPJ_G0019695.1 mouse_genomes_project 12 68949435 69000302 - MGP_LPJ_P0034872 Nemf protein_coding protein_coding MGP_LPJ_T0035428.1 MGP_LPJ_G0019878.1 mouse_genomes_project 12 87783331 87859516 + MGP_LPJ_P0035428 Tmem63c protein_coding nonsense_mediated_decay MGP_LPJ_T0035429.1 MGP_LPJ_G0019878.1 mouse_genomes_project 12 87788280 87859511 + MGP_LPJ_P0035429 Tmem63c protein_coding protein_coding MGP_LPJ_T0035430.1 MGP_LPJ_G0019878.1 mouse_genomes_project 12 87788552 87859506 + MGP_LPJ_P0035430 Tmem63c protein_coding protein_coding MGP_LPJ_T0035431.1 MGP_LPJ_G0019878.1 mouse_genomes_project 12 87788604 87822457 + MGP_LPJ_P0035431 Tmem63c protein_coding protein_coding MGP_LPJ_T0035432.1 MGP_LPJ_G0019878.1 mouse_genomes_project 12 87800649 87859514 + MGP_LPJ_P0035432 Tmem63c protein_coding protein_coding MGP_LPJ_T0034264.1 MGP_LPJ_G0019466.1 mouse_genomes_project 12 959968 992082 + MGP_LPJ_P0034264 Dnajc27 protein_coding protein_coding MGP_LPJ_T0034265.1 MGP_LPJ_G0019466.1 mouse_genomes_project 12 960023 989780 + MGP_LPJ_P0034265 Dnajc27 protein_coding protein_coding MGP_LPJ_T0003407.1 MGP_LPJ_G0003131.1 mouse_genomes_project 12 38606056 38607643 - Gm17024 antisense antisense MGP_LPJ_T0034843.1 MGP_LPJ_G0019685.1 mouse_genomes_project 12 66010946 66815525 - MGP_LPJ_P0034843 Mdga2 protein_coding protein_coding MGP_LPJ_T0034844.1 MGP_LPJ_G0019685.1 mouse_genomes_project 12 66011087 66432473 - MGP_LPJ_P0034844 Mdga2 protein_coding unknown_likely_coding MGP_LPJ_T0034845.1 MGP_LPJ_G0019685.1 mouse_genomes_project 12 66011087 66432463 - MGP_LPJ_P0034845 Mdga2 protein_coding unknown_likely_coding MGP_LPJ_T0034846.1 MGP_LPJ_G0019685.1 mouse_genomes_project 12 66012014 66012437 - MGP_LPJ_P0034846 Mdga2 protein_coding protein_coding MGP_LPJ_T0034847.1 MGP_LPJ_G0019685.1 mouse_genomes_project 12 66012560 66814209 - MGP_LPJ_P0034847 Mdga2 protein_coding protein_coding MGP_LPJ_T0034848.1 MGP_LPJ_G0019685.1 mouse_genomes_project 12 66012847 66814190 - MGP_LPJ_P0034848 Mdga2 protein_coding nonsense_mediated_decay MGP_LPJ_T0034849.1 MGP_LPJ_G0019685.1 mouse_genomes_project 12 66025550 66035546 - Mdga2 protein_coding retained_intron MGP_LPJ_T0034850.1 MGP_LPJ_G0019685.1 mouse_genomes_project 12 66173090 66183592 - Mdga2 protein_coding processed_transcript MGP_LPJ_T0034851.1 MGP_LPJ_G0019685.1 mouse_genomes_project 12 66248271 66389128 - Mdga2 protein_coding processed_transcript MGP_LPJ_T0034852.1 MGP_LPJ_G0019685.1 mouse_genomes_project 12 66789122 66815518 - Mdga2 protein_coding processed_transcript MGP_LPJ_T0034853.1 MGP_LPJ_G0019685.1 mouse_genomes_project 12 66805513 66815357 - Mdga2 protein_coding processed_transcript MGP_LPJ_T0035055.1 MGP_LPJ_G0019760.1 mouse_genomes_project 12 76506858 76528992 + MGP_LPJ_P0035055 Ppp1r36 protein_coding protein_coding MGP_LPJ_T0035897.1 MGP_LPJ_G0020034.1 mouse_genomes_project 12 113618332 113632085 + MGP_LPJ_P0035897 Exoc3l4 protein_coding protein_coding MGP_LPJ_T0035810.1 MGP_LPJ_G0020007.1 mouse_genomes_project 12 110562770 110698640 + MGP_LPJ_P0035810 Evl protein_coding protein_coding MGP_LPJ_T0035811.1 MGP_LPJ_G0020007.1 mouse_genomes_project 12 110562770 110698640 + MGP_LPJ_P0035811 Evl protein_coding protein_coding MGP_LPJ_T0035812.1 MGP_LPJ_G0020007.1 mouse_genomes_project 12 110615408 110698640 + MGP_LPJ_P0035812 Evl protein_coding protein_coding MGP_LPJ_T0035813.1 MGP_LPJ_G0020007.1 mouse_genomes_project 12 110615631 110698649 + MGP_LPJ_P0035813 Evl protein_coding unknown_likely_coding MGP_LPJ_T0035814.1 MGP_LPJ_G0020007.1 mouse_genomes_project 12 110646254 110698640 + MGP_LPJ_P0035814 Evl protein_coding protein_coding MGP_LPJ_T0100235.1 MGP_LPJ_G0038498.1 mouse_genomes_project 12 108043749 108043881 + Gm24986 snoRNA snoRNA MGP_LPJ_T0000277.1 MGP_LPJ_G0000215.1 mouse_genomes_project 12 116506374 116506673 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0003441.1 MGP_LPJ_G0003159.1 mouse_genomes_project 12 111069276 111069745 + Gm28498 antisense antisense MGP_LPJ_T0035989.1 MGP_LPJ_G0020063.1 mouse_genomes_project 12 115118815 115128972 - MGP_LPJ_P0035989 Cdca4 protein_coding protein_coding MGP_LPJ_T0034724.1 MGP_LPJ_G0019641.1 mouse_genomes_project 12 53909547 54005864 - MGP_LPJ_P0034724 Baz1a protein_coding protein_coding MGP_LPJ_T0034725.1 MGP_LPJ_G0019641.1 mouse_genomes_project 12 53910109 54006035 - MGP_LPJ_P0034725 Baz1a protein_coding protein_coding MGP_LPJ_T0034726.1 MGP_LPJ_G0019641.1 mouse_genomes_project 12 53910727 53911709 - Baz1a protein_coding retained_intron MGP_LPJ_T0034727.1 MGP_LPJ_G0019641.1 mouse_genomes_project 12 53939966 53947214 - MGP_LPJ_P0034727 Baz1a protein_coding nonsense_mediated_decay MGP_LPJ_T0034728.1 MGP_LPJ_G0019641.1 mouse_genomes_project 12 53957659 53961277 - MGP_LPJ_P0034728 Baz1a protein_coding nonsense_mediated_decay MGP_LPJ_T0034729.1 MGP_LPJ_G0019641.1 mouse_genomes_project 12 53971727 54034398 - MGP_LPJ_P0034729 Baz1a protein_coding protein_coding MGP_LPJ_T0034730.1 MGP_LPJ_G0019641.1 mouse_genomes_project 12 53993539 54005464 - MGP_LPJ_P0034730 Baz1a protein_coding protein_coding MGP_LPJ_T0034731.1 MGP_LPJ_G0019641.1 mouse_genomes_project 12 53993554 54018621 - MGP_LPJ_P0034731 Baz1a protein_coding protein_coding MGP_LPJ_T0035763.1 MGP_LPJ_G0019994.1 mouse_genomes_project 12 107392725 107463651 - MGP_LPJ_P0035763 Atg2b protein_coding protein_coding MGP_LPJ_T0035764.1 MGP_LPJ_G0019994.1 mouse_genomes_project 12 107396262 107463240 - MGP_LPJ_P0035764 Atg2b protein_coding unknown_likely_coding MGP_LPJ_T0035043.1 MGP_LPJ_G0019755.1 mouse_genomes_project 12 76327481 76400253 + MGP_LPJ_P0035043 Mthfd1 protein_coding protein_coding MGP_LPJ_T0006436.1 MGP_LPJ_G0005363.1 mouse_genomes_project 12 51479670 51481694 - 1700031P21Rik lincRNA lincRNA MGP_LPJ_T0035090.1 MGP_LPJ_G0019774.1 mouse_genomes_project 12 79042788 79063397 - MGP_LPJ_P0035090 Atp6v1d protein_coding protein_coding MGP_LPJ_T0034854.1 MGP_LPJ_G0019686.1 mouse_genomes_project 12 68778853 68780318 - MGP_LPJ_P0034854 Rps29 protein_coding protein_coding MGP_LPJ_T0034855.1 MGP_LPJ_G0019686.1 mouse_genomes_project 12 68779489 68780186 - Rps29 protein_coding retained_intron MGP_LPJ_T0000271.1 MGP_LPJ_G0000209.1 mouse_genomes_project 12 116308903 116309316 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0035823.1 MGP_LPJ_G0020012.1 mouse_genomes_project 12 110883697 110918116 - MGP_LPJ_P0035823 Wars protein_coding protein_coding MGP_LPJ_T0035824.1 MGP_LPJ_G0020012.1 mouse_genomes_project 12 110883697 110919092 - MGP_LPJ_P0035824 Wars protein_coding protein_coding MGP_LPJ_T0035825.1 MGP_LPJ_G0020012.1 mouse_genomes_project 12 110883697 110919055 - MGP_LPJ_P0035825 Wars protein_coding nonsense_mediated_decay MGP_LPJ_T0035826.1 MGP_LPJ_G0020012.1 mouse_genomes_project 12 110883701 110918115 - MGP_LPJ_P0035826 Wars protein_coding protein_coding MGP_LPJ_T0035827.1 MGP_LPJ_G0020012.1 mouse_genomes_project 12 110889505 110900193 - Wars protein_coding retained_intron MGP_LPJ_T0035828.1 MGP_LPJ_G0020012.1 mouse_genomes_project 12 110900025 110919019 - MGP_LPJ_P0035828 Wars protein_coding nonsense_mediated_decay MGP_LPJ_T0035829.1 MGP_LPJ_G0020012.1 mouse_genomes_project 12 110905673 110913335 - Wars protein_coding retained_intron MGP_LPJ_T0009845.1 MGP_LPJ_G0007963.1 mouse_genomes_project 12 111619453 111619547 + Mir770 miRNA miRNA MGP_LPJ_T0035316.1 MGP_LPJ_G0019847.1 mouse_genomes_project 12 85398243 85496190 - MGP_LPJ_P0035316 Ltbp2 protein_coding protein_coding MGP_LPJ_T0035317.1 MGP_LPJ_G0019847.1 mouse_genomes_project 12 85398244 85496153 - MGP_LPJ_P0035317 Ltbp2 protein_coding protein_coding MGP_LPJ_T0035318.1 MGP_LPJ_G0019847.1 mouse_genomes_project 12 85398360 85496137 - MGP_LPJ_P0035318 Ltbp2 protein_coding protein_coding MGP_LPJ_T0035319.1 MGP_LPJ_G0019847.1 mouse_genomes_project 12 85400237 85406872 - MGP_LPJ_P0035319 Ltbp2 protein_coding protein_coding MGP_LPJ_T0035320.1 MGP_LPJ_G0019847.1 mouse_genomes_project 12 85401410 85408000 - MGP_LPJ_P0035320 Ltbp2 protein_coding protein_coding MGP_LPJ_T0035321.1 MGP_LPJ_G0019847.1 mouse_genomes_project 12 85406887 85414492 - MGP_LPJ_P0035321 Ltbp2 protein_coding protein_coding MGP_LPJ_T0035322.1 MGP_LPJ_G0019847.1 mouse_genomes_project 12 85422741 85496149 - Ltbp2 protein_coding retained_intron MGP_LPJ_T0035836.1 MGP_LPJ_G0020015.1 mouse_genomes_project 12 111500068 111501028 + Dlk1 protein_coding retained_intron MGP_LPJ_T0035837.1 MGP_LPJ_G0020015.1 mouse_genomes_project 12 111500094 111511314 + MGP_LPJ_P0035837 Dlk1 protein_coding protein_coding MGP_LPJ_T0035838.1 MGP_LPJ_G0020015.1 mouse_genomes_project 12 111500700 111508678 + MGP_LPJ_P0035838 Dlk1 protein_coding protein_coding MGP_LPJ_T0035839.1 MGP_LPJ_G0020015.1 mouse_genomes_project 12 111500736 111508596 + MGP_LPJ_P0035839 Dlk1 protein_coding protein_coding MGP_LPJ_T0035840.1 MGP_LPJ_G0020015.1 mouse_genomes_project 12 111500736 111508359 + MGP_LPJ_P0035840 Dlk1 protein_coding protein_coding MGP_LPJ_T0035841.1 MGP_LPJ_G0020015.1 mouse_genomes_project 12 111500780 111511314 + MGP_LPJ_P0035841 Dlk1 protein_coding protein_coding MGP_LPJ_T0035842.1 MGP_LPJ_G0020015.1 mouse_genomes_project 12 111500900 111511314 + MGP_LPJ_P0035842 Dlk1 protein_coding protein_coding MGP_LPJ_T0035843.1 MGP_LPJ_G0020015.1 mouse_genomes_project 12 111500905 111508338 + MGP_LPJ_P0035843 Dlk1 protein_coding protein_coding MGP_LPJ_T0035844.1 MGP_LPJ_G0020015.1 mouse_genomes_project 12 111501440 111507740 + MGP_LPJ_P0035844 Dlk1 protein_coding protein_coding MGP_LPJ_T0035845.1 MGP_LPJ_G0020015.1 mouse_genomes_project 12 111507820 111508453 + MGP_LPJ_P0035845 Dlk1 protein_coding protein_coding MGP_LPJ_T0009899.1 MGP_LPJ_G0008017.1 mouse_genomes_project 12 111802186 111802268 + Mir453 miRNA miRNA MGP_LPJ_T0035945.1 MGP_LPJ_G0020046.1 mouse_genomes_project 12 114080231 114162796 - MGP_LPJ_P0035945 Ppp1r13b protein_coding protein_coding MGP_LPJ_T0035946.1 MGP_LPJ_G0020046.1 mouse_genomes_project 12 114120121 114162781 - MGP_LPJ_P0035946 Ppp1r13b protein_coding protein_coding MGP_LPJ_T0009804.1 MGP_LPJ_G0007922.1 mouse_genomes_project 12 35154248 35154322 + Mir5099 miRNA miRNA MGP_LPJ_T0035511.1 MGP_LPJ_G0019901.1 mouse_genomes_project 12 92466257 92509414 - MGP_LPJ_P0035511 Gtf2a1 protein_coding unknown_likely_coding MGP_LPJ_T0034374.1 MGP_LPJ_G0019511.1 mouse_genomes_project 12 13266077 13291218 - MGP_LPJ_P0034374 Trib2 protein_coding protein_coding MGP_LPJ_T0034375.1 MGP_LPJ_G0019511.1 mouse_genomes_project 12 13290316 13291310 - Trib2 protein_coding processed_transcript MGP_LPJ_T0011354.1 MGP_LPJ_G0009472.1 mouse_genomes_project 12 111584393 111584598 + Gm27528 misc_RNA misc_RNA MGP_LPJ_T0035449.1 MGP_LPJ_G0019887.1 mouse_genomes_project 12 88059262 88080227 - MGP_LPJ_P0035449 Ism2 protein_coding protein_coding MGP_LPJ_T0035450.1 MGP_LPJ_G0019887.1 mouse_genomes_project 12 88060306 88067753 - MGP_LPJ_P0035450 Ism2 protein_coding protein_coding MGP_LPJ_T0035451.1 MGP_LPJ_G0019887.1 mouse_genomes_project 12 88063009 88067689 - Ism2 protein_coding processed_transcript MGP_LPJ_T0000098.1 MGP_LPJ_G0000076.1 mouse_genomes_project 12 116999411 116999869 - MGP_LPJ_P0000098 Ighv6-3 IG_V_gene IG_V_gene MGP_LPJ_T0101815.1 MGP_LPJ_G0039852.1 mouse_genomes_project 12 106006508 106012036 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0100226.1 MGP_LPJ_G0038489.1 mouse_genomes_project 12 78337236 78337357 + Gm24994 snoRNA snoRNA MGP_LPJ_T0035440.1 MGP_LPJ_G0019883.1 mouse_genomes_project 12 87977477 87987514 + Samd15 protein_coding retained_intron MGP_LPJ_T0035441.1 MGP_LPJ_G0019883.1 mouse_genomes_project 12 87977521 87987192 + Samd15 protein_coding processed_transcript MGP_LPJ_T0035442.1 MGP_LPJ_G0019883.1 mouse_genomes_project 12 87978318 87991961 + MGP_LPJ_P0035442 Samd15 protein_coding protein_coding MGP_LPJ_T0035443.1 MGP_LPJ_G0019883.1 mouse_genomes_project 12 87978525 87979719 + MGP_LPJ_P0035443 Samd15 protein_coding protein_coding MGP_LPJ_T0035118.1 MGP_LPJ_G0019788.1 mouse_genomes_project 12 80623260 80727102 - MGP_LPJ_P0035118 Dcaf5 protein_coding protein_coding MGP_LPJ_T0006481.1 MGP_LPJ_G0005400.1 mouse_genomes_project 12 108702393 108743620 + 1700013N06Rik lincRNA lincRNA MGP_LPJ_T0036031.1 MGP_LPJ_G0020078.1 mouse_genomes_project 12 115895504 115898051 + MGP_LPJ_P0036031 protein_coding protein_coding MGP_LPJ_T0000100.1 MGP_LPJ_G0000078.1 mouse_genomes_project 12 117047487 117047798 - MGP_LPJ_P0000100 IG_V_gene IG_V_gene MGP_LPJ_T0000101.1 MGP_LPJ_G0000078.1 mouse_genomes_project 12 117047490 117047787 - MGP_LPJ_P0000101 IG_V_gene IG_V_gene MGP_LPJ_T0098969.1 MGP_LPJ_G0037232.1 mouse_genomes_project 12 47729764 47729871 + Gm26454 snRNA snRNA MGP_LPJ_T0000087.1 MGP_LPJ_G0000069.1 mouse_genomes_project 12 116860192 116860627 - MGP_LPJ_P0000087 Ighv3-4 IG_V_gene IG_V_gene MGP_LPJ_T0012828.1 MGP_LPJ_G0010919.1 mouse_genomes_project 12 102202322 102202779 - processed_pseudogene processed_pseudogene MGP_LPJ_T0034616.1 MGP_LPJ_G0019598.1 mouse_genomes_project 12 35465905 35537744 + MGP_LPJ_P0034616 Meox2 protein_coding protein_coding MGP_LPJ_T0035541.1 MGP_LPJ_G0019909.1 mouse_genomes_project 12 99903312 99965723 - MGP_LPJ_P0035541 Ptpn21 protein_coding protein_coding MGP_LPJ_T0035542.1 MGP_LPJ_G0019909.1 mouse_genomes_project 12 99903312 99968482 - MGP_LPJ_P0035542 Ptpn21 protein_coding protein_coding MGP_LPJ_T0035310.1 MGP_LPJ_G0019843.1 mouse_genomes_project 12 85249257 85261084 + MGP_LPJ_P0035310 Vrtn protein_coding protein_coding MGP_LPJ_T0035311.1 MGP_LPJ_G0019843.1 mouse_genomes_project 12 85250793 85261084 + MGP_LPJ_P0035311 Vrtn protein_coding protein_coding MGP_LPJ_T0035312.1 MGP_LPJ_G0019843.1 mouse_genomes_project 12 85251134 85261084 + MGP_LPJ_P0035312 Vrtn protein_coding protein_coding MGP_LPJ_T0035644.1 MGP_LPJ_G0019940.1 mouse_genomes_project 12 104240441 104241873 - MGP_LPJ_P0035644 Moap1 protein_coding protein_coding MGP_LPJ_T0035645.1 MGP_LPJ_G0019940.1 mouse_genomes_project 12 104240441 104241857 - MGP_LPJ_P0035645 Moap1 protein_coding protein_coding MGP_LPJ_T0009847.1 MGP_LPJ_G0007965.1 mouse_genomes_project 12 111635994 111636077 + Mir493 miRNA miRNA MGP_LPJ_T0034314.1 MGP_LPJ_G0019487.1 mouse_genomes_project 12 5393028 5423349 + MGP_LPJ_P0034314 Hs1bp3 protein_coding protein_coding MGP_LPJ_T0034970.1 MGP_LPJ_G0019728.1 mouse_genomes_project 12 72463266 72472642 - MGP_LPJ_P0034970 unknown_likely_coding unknown_likely_coding MGP_LPJ_T0035609.1 MGP_LPJ_G0019928.1 mouse_genomes_project 12 103207307 103279438 - MGP_LPJ_P0035609 Fbln5 protein_coding protein_coding MGP_LPJ_T0035572.1 MGP_LPJ_G0019916.1 mouse_genomes_project 12 101245996 101350445 + MGP_LPJ_P0035572 Kcnk13 protein_coding protein_coding MGP_LPJ_T0035573.1 MGP_LPJ_G0019916.1 mouse_genomes_project 12 101245996 101350445 + MGP_LPJ_P0035573 Kcnk13 protein_coding protein_coding MGP_LPJ_T0035574.1 MGP_LPJ_G0019916.1 mouse_genomes_project 12 101246002 101247778 + MGP_LPJ_P0035574 Kcnk13 protein_coding protein_coding MGP_LPJ_T0035575.1 MGP_LPJ_G0019916.1 mouse_genomes_project 12 101246022 101350437 + MGP_LPJ_P0035575 Kcnk13 protein_coding protein_coding MGP_LPJ_T0034419.1 MGP_LPJ_G0019523.1 mouse_genomes_project 12 15107724 15117337 + MGP_LPJ_P0034419 Odc1 protein_coding protein_coding MGP_LPJ_T0034420.1 MGP_LPJ_G0019523.1 mouse_genomes_project 12 15107926 15116566 + MGP_LPJ_P0034420 Odc1 protein_coding unknown_likely_coding MGP_LPJ_T0101257.1 MGP_LPJ_G0039499.1 mouse_genomes_project 12 17795362 17795509 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0035469.1 MGP_LPJ_G0019890.1 mouse_genomes_project 12 88231053 88237057 + MGP_LPJ_P0035469 Slirp protein_coding protein_coding MGP_LPJ_T0035470.1 MGP_LPJ_G0019890.1 mouse_genomes_project 12 88231071 88237061 + MGP_LPJ_P0035470 Slirp protein_coding protein_coding MGP_LPJ_T0035471.1 MGP_LPJ_G0019890.1 mouse_genomes_project 12 88231077 88237041 + MGP_LPJ_P0035471 Slirp protein_coding protein_coding MGP_LPJ_T0035747.1 MGP_LPJ_G0019986.1 mouse_genomes_project 12 106871008 106932444 + MGP_LPJ_P0035747 Tcl1b2 protein_coding protein_coding MGP_LPJ_T0035749.1 MGP_LPJ_G0019986.1 mouse_genomes_project 12 106872027 106938487 + MGP_LPJ_P0035749 Tcl1b2 protein_coding protein_coding MGP_LPJ_T0098147.1 MGP_LPJ_G0036428.1 mouse_genomes_project 12 105708169 105708277 + Gm23289 rRNA rRNA MGP_LPJ_T0036059.1 MGP_LPJ_G0020088.1 mouse_genomes_project 12 121226369 121295964 - MGP_LPJ_P0036059 Sp4 protein_coding protein_coding MGP_LPJ_T0012813.1 MGP_LPJ_G0010904.1 mouse_genomes_project 12 79382593 79382941 + processed_pseudogene processed_pseudogene MGP_LPJ_T0035093.1 MGP_LPJ_G0019777.1 mouse_genomes_project 12 79175160 79217598 - MGP_LPJ_P0035093 Tmem229b-ps protein_coding protein_coding MGP_LPJ_T0035094.1 MGP_LPJ_G0019777.1 mouse_genomes_project 12 79183635 79191109 - Tmem229b-ps protein_coding processed_transcript MGP_LPJ_T0035095.1 MGP_LPJ_G0019777.1 mouse_genomes_project 12 79188100 79216921 - Tmem229b-ps protein_coding processed_transcript MGP_LPJ_T0003430.1 MGP_LPJ_G0003150.1 mouse_genomes_project 12 85718673 85720528 + Prox2os antisense antisense MGP_LPJ_T0012823.1 MGP_LPJ_G0010914.1 mouse_genomes_project 12 92384940 92385730 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100255.1 MGP_LPJ_G0038518.1 mouse_genomes_project 12 111749114 111749187 + Gm23787 snoRNA snoRNA MGP_LPJ_T0035146.1 MGP_LPJ_G0019800.1 mouse_genomes_project 12 81708698 81912731 - MGP_LPJ_P0035146 Gm20498 protein_coding protein_coding MGP_LPJ_T0035151.1 MGP_LPJ_G0019800.1 mouse_genomes_project 12 81841435 81912708 - MGP_LPJ_P0035151 Gm20498 protein_coding protein_coding MGP_LPJ_T0035158.1 MGP_LPJ_G0019800.1 mouse_genomes_project 12 81845391 81912703 - MGP_LPJ_P0035158 Gm20498 protein_coding nonsense_mediated_decay MGP_LPJ_T0035159.1 MGP_LPJ_G0019800.1 mouse_genomes_project 12 81845427 81912587 - Gm20498 protein_coding processed_transcript MGP_LPJ_T0035160.1 MGP_LPJ_G0019800.1 mouse_genomes_project 12 81845449 81912703 - Gm20498 protein_coding processed_transcript MGP_LPJ_T0035162.1 MGP_LPJ_G0019800.1 mouse_genomes_project 12 81852894 81912703 - Gm20498 protein_coding processed_transcript MGP_LPJ_T0003408.1 MGP_LPJ_G0003132.1 mouse_genomes_project 12 53018485 53035830 - 1700060O08Rik antisense antisense MGP_LPJ_T0100204.1 MGP_LPJ_G0038467.1 mouse_genomes_project 12 34689009 34689119 - Gm25438 snoRNA snoRNA MGP_LPJ_T0035724.1 MGP_LPJ_G0019971.1 mouse_genomes_project 12 105745228 105753720 - MGP_LPJ_P0035724 Serpina3c protein_coding protein_coding MGP_LPJ_T0100218.1 MGP_LPJ_G0038481.1 mouse_genomes_project 12 64217538 64217669 + Gm24066 snoRNA snoRNA MGP_LPJ_T0000891.1 MGP_LPJ_G0000820.1 mouse_genomes_project 12 55707895 55708759 - TEC TEC MGP_LPJ_T0034985.1 MGP_LPJ_G0019734.1 mouse_genomes_project 12 73012005 73025815 - MGP_LPJ_P0034985 Six4 protein_coding protein_coding MGP_LPJ_T0034986.1 MGP_LPJ_G0019734.1 mouse_genomes_project 12 73015840 73025846 - MGP_LPJ_P0034986 Six4 protein_coding protein_coding MGP_LPJ_T0011349.1 MGP_LPJ_G0009467.1 mouse_genomes_project 12 87379062 87379147 + Gm27993 misc_RNA misc_RNA MGP_LPJ_T0034367.1 MGP_LPJ_G0019507.1 mouse_genomes_project 12 10289345 10295164 - MGP_LPJ_P0034367 Mycn protein_coding protein_coding MGP_LPJ_T0034368.1 MGP_LPJ_G0019507.1 mouse_genomes_project 12 10289345 10293866 - MGP_LPJ_P0034368 Mycn protein_coding protein_coding MGP_LPJ_T0034369.1 MGP_LPJ_G0019507.1 mouse_genomes_project 12 10294193 10295075 - Mycn protein_coding processed_transcript MGP_LPJ_T0098129.1 MGP_LPJ_G0036410.1 mouse_genomes_project 12 1238727 1238841 + Gm23756 rRNA rRNA MGP_LPJ_T0012821.1 MGP_LPJ_G0010912.1 mouse_genomes_project 12 87832263 87832378 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098982.1 MGP_LPJ_G0037245.1 mouse_genomes_project 12 60055560 60055667 + Gm23059 snRNA snRNA MGP_LPJ_T0000258.1 MGP_LPJ_G0000196.1 mouse_genomes_project 12 116000833 116001270 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0000283.1 MGP_LPJ_G0000221.1 mouse_genomes_project 12 116938319 116938610 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0101802.1 MGP_LPJ_G0039840.1 mouse_genomes_project 12 75670914 75678217 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0101803.1 MGP_LPJ_G0039840.1 mouse_genomes_project 12 75671557 75678240 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0035066.1 MGP_LPJ_G0019766.1 mouse_genomes_project 12 76892736 76895948 - MGP_LPJ_P0035066 protein_coding protein_coding MGP_LPJ_T0009808.1 MGP_LPJ_G0007926.1 mouse_genomes_project 12 53640600 53640680 - Mir1892 miRNA miRNA MGP_LPJ_T0009921.1 MGP_LPJ_G0008039.1 mouse_genomes_project 12 117135150 117135210 - Mir7094-2 miRNA miRNA MGP_LPJ_T0034913.1 MGP_LPJ_G0019710.1 mouse_genomes_project 12 69961434 69972076 - MGP_LPJ_P0034913 Trim9 protein_coding unknown_likely_coding MGP_LPJ_T0034914.1 MGP_LPJ_G0019710.1 mouse_genomes_project 12 69961440 70064344 - MGP_LPJ_P0034914 Trim9 protein_coding protein_coding MGP_LPJ_T0034915.1 MGP_LPJ_G0019710.1 mouse_genomes_project 12 69961440 70064344 - MGP_LPJ_P0034915 Trim9 protein_coding protein_coding MGP_LPJ_T0034916.1 MGP_LPJ_G0019710.1 mouse_genomes_project 12 69980646 70064344 - MGP_LPJ_P0034916 Trim9 protein_coding protein_coding MGP_LPJ_T0036052.1 MGP_LPJ_G0020086.1 mouse_genomes_project 12 120813181 120851439 + MGP_LPJ_P0036052 Cdca7l protein_coding protein_coding MGP_LPJ_T0036053.1 MGP_LPJ_G0020086.1 mouse_genomes_project 12 120813550 120846490 + MGP_LPJ_P0036053 Cdca7l protein_coding protein_coding MGP_LPJ_T0036054.1 MGP_LPJ_G0020086.1 mouse_genomes_project 12 120813554 120848360 + MGP_LPJ_P0036054 Cdca7l protein_coding protein_coding MGP_LPJ_T0034370.1 MGP_LPJ_G0019508.1 mouse_genomes_project 12 10595081 10625213 - MGP_LPJ_P0034370 Ddx1 protein_coding protein_coding MGP_LPJ_T0017242.1 MGP_LPJ_G0015144.1 mouse_genomes_project 12 71099778 71103818 - 4930474H06Rik processed_transcript processed_transcript MGP_LPJ_T0034688.1 MGP_LPJ_G0019620.1 mouse_genomes_project 12 49112222 49432817 - MGP_LPJ_P0034688 Prkd1 protein_coding protein_coding MGP_LPJ_T0034262.1 MGP_LPJ_G0019465.1 mouse_genomes_project 12 831573 909862 - MGP_LPJ_P0034262 Efr3b protein_coding unknown_likely_coding MGP_LPJ_T0034263.1 MGP_LPJ_G0019465.1 mouse_genomes_project 12 831576 910067 - MGP_LPJ_P0034263 Efr3b protein_coding protein_coding MGP_LPJ_T0035008.1 MGP_LPJ_G0019744.1 mouse_genomes_project 12 74268835 74271845 + MGP_LPJ_P0035008 Dbpht2 protein_coding protein_coding MGP_LPJ_T0035315.1 MGP_LPJ_G0019846.1 mouse_genomes_project 12 85387226 85389046 + MGP_LPJ_P0035315 Isca2 protein_coding protein_coding MGP_LPJ_T0035898.1 MGP_LPJ_G0020035.1 mouse_genomes_project 12 113643793 113656348 + MGP_LPJ_P0035898 Tnfaip2 protein_coding protein_coding MGP_LPJ_T0035899.1 MGP_LPJ_G0020035.1 mouse_genomes_project 12 113643982 113656008 + MGP_LPJ_P0035899 Tnfaip2 protein_coding protein_coding MGP_LPJ_T0035900.1 MGP_LPJ_G0020035.1 mouse_genomes_project 12 113643986 113656008 + Tnfaip2 protein_coding retained_intron MGP_LPJ_T0035901.1 MGP_LPJ_G0020035.1 mouse_genomes_project 12 113643986 113649910 + MGP_LPJ_P0035901 Tnfaip2 protein_coding nonsense_mediated_decay MGP_LPJ_T0035902.1 MGP_LPJ_G0020035.1 mouse_genomes_project 12 113645648 113646836 + MGP_LPJ_P0035902 Tnfaip2 protein_coding protein_coding MGP_LPJ_T0035903.1 MGP_LPJ_G0020035.1 mouse_genomes_project 12 113646322 113655155 + MGP_LPJ_P0035903 Tnfaip2 protein_coding nonsense_mediated_decay MGP_LPJ_T0035904.1 MGP_LPJ_G0020035.1 mouse_genomes_project 12 113647408 113655155 + MGP_LPJ_P0035904 Tnfaip2 protein_coding nonsense_mediated_decay MGP_LPJ_T0035905.1 MGP_LPJ_G0020035.1 mouse_genomes_project 12 113649457 113650634 + Tnfaip2 protein_coding retained_intron MGP_LPJ_T0035906.1 MGP_LPJ_G0020035.1 mouse_genomes_project 12 113650847 113652799 + Tnfaip2 protein_coding retained_intron MGP_LPJ_T0035907.1 MGP_LPJ_G0020035.1 mouse_genomes_project 12 113651202 113655089 + MGP_LPJ_P0035907 Tnfaip2 protein_coding nonsense_mediated_decay MGP_LPJ_T0035908.1 MGP_LPJ_G0020035.1 mouse_genomes_project 12 113651848 113654956 + Tnfaip2 protein_coding retained_intron MGP_LPJ_T0098146.1 MGP_LPJ_G0036427.1 mouse_genomes_project 12 98552312 98552392 - Gm23558 rRNA rRNA MGP_LPJ_T0034288.1 MGP_LPJ_G0019476.1 mouse_genomes_project 12 1694780 1703706 + MGP_LPJ_P0034288 Pfn4 protein_coding protein_coding MGP_LPJ_T0034289.1 MGP_LPJ_G0019476.1 mouse_genomes_project 12 1694936 1703678 + MGP_LPJ_P0034289 Pfn4 protein_coding protein_coding MGP_LPJ_T0036027.1 MGP_LPJ_G0020076.1 mouse_genomes_project 12 115502239 115505832 + MGP_LPJ_P0036027 Tmem121 protein_coding protein_coding MGP_LPJ_T0034759.1 MGP_LPJ_G0019658.1 mouse_genomes_project 12 55791777 55813967 + MGP_LPJ_P0034759 Pax9 protein_coding protein_coding MGP_LPJ_T0034760.1 MGP_LPJ_G0019658.1 mouse_genomes_project 12 55795643 55814082 + MGP_LPJ_P0034760 Pax9 protein_coding protein_coding MGP_LPJ_T0034761.1 MGP_LPJ_G0019658.1 mouse_genomes_project 12 55795733 55811789 + Pax9 protein_coding retained_intron MGP_LPJ_T0000007.1 MGP_LPJ_G0000005.1 mouse_genomes_project 12 115634858 115636506 - MGP_LPJ_P0000007 Ighg2c IG_C_gene IG_C_gene MGP_LPJ_T0100246.1 MGP_LPJ_G0038509.1 mouse_genomes_project 12 111720515 111720587 + DQ267102 snoRNA snoRNA MGP_LPJ_T0035670.1 MGP_LPJ_G0019949.1 mouse_genomes_project 12 104846817 104882915 - MGP_LPJ_P0035670 Asb2 protein_coding protein_coding MGP_LPJ_T0035671.1 MGP_LPJ_G0019949.1 mouse_genomes_project 12 104846821 104861266 - Asb2 protein_coding retained_intron MGP_LPJ_T0035672.1 MGP_LPJ_G0019949.1 mouse_genomes_project 12 104846821 104864055 - MGP_LPJ_P0035672 Asb2 protein_coding protein_coding MGP_LPJ_T0035673.1 MGP_LPJ_G0019949.1 mouse_genomes_project 12 104860550 104862416 - Asb2 protein_coding processed_transcript MGP_LPJ_T0035362.1 MGP_LPJ_G0019859.1 mouse_genomes_project 12 85934105 85944873 + MGP_LPJ_P0035362 Zc2hc1c protein_coding protein_coding MGP_LPJ_T0011343.1 MGP_LPJ_G0009461.1 mouse_genomes_project 12 68780426 68780726 + Rn7s1 misc_RNA misc_RNA MGP_LPJ_T0098150.1 MGP_LPJ_G0036431.1 mouse_genomes_project 12 122888857 122888975 - Gm25675 rRNA rRNA MGP_LPJ_T0035830.1 MGP_LPJ_G0020013.1 mouse_genomes_project 12 110919189 111063754 + MGP_LPJ_P0035830 Wdr25 protein_coding protein_coding MGP_LPJ_T0035831.1 MGP_LPJ_G0020013.1 mouse_genomes_project 12 110919234 111063627 + MGP_LPJ_P0035831 Wdr25 protein_coding protein_coding MGP_LPJ_T0034687.1 MGP_LPJ_G0019619.1 mouse_genomes_project 12 48515089 48515676 - MGP_LPJ_P0034687 protein_coding protein_coding MGP_LPJ_T0101258.1 MGP_LPJ_G0039500.1 mouse_genomes_project 12 102487478 102491143 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0101259.1 MGP_LPJ_G0039500.1 mouse_genomes_project 12 102490971 102491623 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0035063.1 MGP_LPJ_G0019765.1 mouse_genomes_project 12 76861345 77040050 + MGP_LPJ_P0035063 Fntb protein_coding nonsense_mediated_decay MGP_LPJ_T0035064.1 MGP_LPJ_G0019765.1 mouse_genomes_project 12 76861354 77039621 + MGP_LPJ_P0035064 Fntb protein_coding protein_coding MGP_LPJ_T0035073.1 MGP_LPJ_G0019765.1 mouse_genomes_project 12 76948214 77040803 + MGP_LPJ_P0035073 Fntb protein_coding protein_coding MGP_LPJ_T0035074.1 MGP_LPJ_G0019765.1 mouse_genomes_project 12 76948233 76956555 + Fntb protein_coding processed_transcript MGP_LPJ_T0035075.1 MGP_LPJ_G0019765.1 mouse_genomes_project 12 76951097 77005909 + Fntb protein_coding processed_transcript MGP_LPJ_T0035076.1 MGP_LPJ_G0019765.1 mouse_genomes_project 12 77005161 77029215 + Fntb protein_coding processed_transcript MGP_LPJ_T0035077.1 MGP_LPJ_G0019765.1 mouse_genomes_project 12 77028391 77029294 + Fntb protein_coding processed_transcript MGP_LPJ_T0035078.1 MGP_LPJ_G0019765.1 mouse_genomes_project 12 77028960 77034552 + Fntb protein_coding retained_intron MGP_LPJ_T0000259.1 MGP_LPJ_G0000197.1 mouse_genomes_project 12 116020801 116041153 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0012819.1 MGP_LPJ_G0010910.1 mouse_genomes_project 12 84829160 84829802 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098145.1 MGP_LPJ_G0036426.1 mouse_genomes_project 12 91732089 91732206 + n-R5s65 rRNA rRNA MGP_LPJ_T0035739.1 MGP_LPJ_G0019979.1 mouse_genomes_project 12 106139733 106141856 - MGP_LPJ_P0035739 Gsc protein_coding protein_coding MGP_LPJ_T0000032.1 MGP_LPJ_G0000025.1 mouse_genomes_project 12 115946720 115946743 - MGP_LPJ_P0000032 Gm16968 IG_D_gene IG_D_gene MGP_LPJ_T0009852.1 MGP_LPJ_G0007970.1 mouse_genomes_project 12 111643705 111643794 + Mir3070a miRNA miRNA MGP_LPJ_T0035081.1 MGP_LPJ_G0019769.1 mouse_genomes_project 12 77381858 77627014 + MGP_LPJ_P0035081 Fut8 protein_coding protein_coding MGP_LPJ_T0035082.1 MGP_LPJ_G0019769.1 mouse_genomes_project 12 77381858 77627014 + MGP_LPJ_P0035082 Fut8 protein_coding protein_coding MGP_LPJ_T0035083.1 MGP_LPJ_G0019769.1 mouse_genomes_project 12 77382819 77627356 + MGP_LPJ_P0035083 Fut8 protein_coding protein_coding MGP_LPJ_T0000037.1 MGP_LPJ_G0000030.1 mouse_genomes_project 12 115784308 115784362 - MGP_LPJ_P0000037 Ighj4 IG_J_gene IG_J_gene MGP_LPJ_T0000024.1 MGP_LPJ_G0000018.1 mouse_genomes_project 12 115805333 115805343 - MGP_LPJ_P0000024 Ighd5-2 IG_D_gene IG_D_gene MGP_LPJ_T0098972.1 MGP_LPJ_G0037235.1 mouse_genomes_project 12 51483868 51483975 - Gm23296 snRNA snRNA MGP_LPJ_T0101812.1 MGP_LPJ_G0039849.1 mouse_genomes_project 12 105676962 105682998 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0034443.1 MGP_LPJ_G0019530.1 mouse_genomes_project 12 22213182 22213633 - MGP_LPJ_P0034443 Gm16372 protein_coding protein_coding MGP_LPJ_T0011336.1 MGP_LPJ_G0009454.1 mouse_genomes_project 12 8952410 8952718 - Gm23781 misc_RNA misc_RNA MGP_LPJ_T0034917.1 MGP_LPJ_G0019711.1 mouse_genomes_project 12 70195365 70211932 + MGP_LPJ_P0034917 Tmx1 protein_coding protein_coding MGP_LPJ_T0034918.1 MGP_LPJ_G0019711.1 mouse_genomes_project 12 70198310 70210145 + MGP_LPJ_P0034918 Tmx1 protein_coding nonsense_mediated_decay MGP_LPJ_T0034919.1 MGP_LPJ_G0019711.1 mouse_genomes_project 12 70202113 70202849 + Tmx1 protein_coding retained_intron MGP_LPJ_T0011341.1 MGP_LPJ_G0009459.1 mouse_genomes_project 12 55337700 55337985 - Gm24685 misc_RNA misc_RNA MGP_LPJ_T0034548.1 MGP_LPJ_G0019570.1 mouse_genomes_project 12 30002445 30027764 - MGP_LPJ_P0034548 Hbp1 protein_coding protein_coding MGP_LPJ_T0034549.1 MGP_LPJ_G0019570.1 mouse_genomes_project 12 30005565 30027452 - MGP_LPJ_P0034549 Hbp1 protein_coding protein_coding MGP_LPJ_T0034550.1 MGP_LPJ_G0019570.1 mouse_genomes_project 12 30006993 30017669 - MGP_LPJ_P0034550 Hbp1 protein_coding protein_coding MGP_LPJ_T0034551.1 MGP_LPJ_G0019570.1 mouse_genomes_project 12 30007104 30010984 - Hbp1 protein_coding retained_intron MGP_LPJ_T0034552.1 MGP_LPJ_G0019570.1 mouse_genomes_project 12 30009013 30026837 - MGP_LPJ_P0034552 Hbp1 protein_coding protein_coding MGP_LPJ_T0034553.1 MGP_LPJ_G0019570.1 mouse_genomes_project 12 30010522 30027399 - MGP_LPJ_P0034553 Hbp1 protein_coding protein_coding MGP_LPJ_T0034554.1 MGP_LPJ_G0019570.1 mouse_genomes_project 12 30012639 30027450 - MGP_LPJ_P0034554 Hbp1 protein_coding protein_coding MGP_LPJ_T0034555.1 MGP_LPJ_G0019570.1 mouse_genomes_project 12 30013225 30027439 - MGP_LPJ_P0034555 Hbp1 protein_coding protein_coding MGP_LPJ_T0034556.1 MGP_LPJ_G0019570.1 mouse_genomes_project 12 30015931 30027463 - Hbp1 protein_coding retained_intron MGP_LPJ_T0034391.1 MGP_LPJ_G0019515.1 mouse_genomes_project 12 14333551 14349283 + MGP_LPJ_P0034391 E2f6 protein_coding protein_coding MGP_LPJ_T0034392.1 MGP_LPJ_G0019515.1 mouse_genomes_project 12 14336531 14349300 + MGP_LPJ_P0034392 E2f6 protein_coding unknown_likely_coding MGP_LPJ_T0035543.1 MGP_LPJ_G0019910.1 mouse_genomes_project 12 99977912 100019881 + MGP_LPJ_P0035543 Zc3h14 protein_coding protein_coding MGP_LPJ_T0035544.1 MGP_LPJ_G0019910.1 mouse_genomes_project 12 99977912 100019881 + MGP_LPJ_P0035544 Zc3h14 protein_coding protein_coding MGP_LPJ_T0035545.1 MGP_LPJ_G0019910.1 mouse_genomes_project 12 99977912 100019881 + MGP_LPJ_P0035545 Zc3h14 protein_coding protein_coding MGP_LPJ_T0035546.1 MGP_LPJ_G0019910.1 mouse_genomes_project 12 100002957 100019881 + MGP_LPJ_P0035546 Zc3h14 protein_coding protein_coding MGP_LPJ_T0006483.1 MGP_LPJ_G0005402.1 mouse_genomes_project 12 108962236 108984691 - Gm16086 lincRNA lincRNA MGP_LPJ_T0012795.1 MGP_LPJ_G0010886.1 mouse_genomes_project 12 53980323 53981494 + processed_pseudogene processed_pseudogene MGP_LPJ_T0034830.1 MGP_LPJ_G0019678.1 mouse_genomes_project 12 64462433 64527734 + MGP_LPJ_P0034830 Fam179b protein_coding protein_coding MGP_LPJ_T0000286.1 MGP_LPJ_G0000224.1 mouse_genomes_project 12 117117541 117117839 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0034884.1 MGP_LPJ_G0019701.1 mouse_genomes_project 12 69374980 69410095 + MGP_LPJ_P0034884 Atp5s protein_coding protein_coding MGP_LPJ_T0000063.1 MGP_LPJ_G0000051.1 mouse_genomes_project 12 116249425 116250090 - MGP_LPJ_P0000063 IG_V_gene IG_V_gene MGP_LPJ_T0006434.1 MGP_LPJ_G0005361.1 mouse_genomes_project 12 48213649 48217521 - 1810007C17Rik lincRNA lincRNA MGP_LPJ_T0035399.1 MGP_LPJ_G0019869.1 mouse_genomes_project 12 86748100 86771338 - MGP_LPJ_P0035399 Tgfb3 protein_coding protein_coding MGP_LPJ_T0034705.1 MGP_LPJ_G0019630.1 mouse_genomes_project 12 50851217 50870475 - MGP_LPJ_P0034705 Dtd2 protein_coding protein_coding MGP_LPJ_T0034706.1 MGP_LPJ_G0019630.1 mouse_genomes_project 12 50861299 50870475 - MGP_LPJ_P0034706 Dtd2 protein_coding protein_coding MGP_LPJ_T0098967.1 MGP_LPJ_G0037230.1 mouse_genomes_project 12 31123265 31123367 - Gm24922 snRNA snRNA MGP_LPJ_T0035742.1 MGP_LPJ_G0019982.1 mouse_genomes_project 12 106445023 106558466 - MGP_LPJ_P0035742 Clmn protein_coding protein_coding MGP_LPJ_T0035743.1 MGP_LPJ_G0019982.1 mouse_genomes_project 12 106445023 106558466 - MGP_LPJ_P0035743 Clmn protein_coding protein_coding MGP_LPJ_T0100192.1 MGP_LPJ_G0038455.1 mouse_genomes_project 12 9302735 9302864 + Gm25610 snoRNA snoRNA MGP_LPJ_T0097982.1 MGP_LPJ_G0036263.1 mouse_genomes_project 12 54884112 54885082 + pseudogene pseudogene MGP_LPJ_T0000287.1 MGP_LPJ_G0000225.1 mouse_genomes_project 12 117168287 117168586 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0035564.1 MGP_LPJ_G0019914.1 mouse_genomes_project 12 100998562 101161981 - MGP_LPJ_P0035564 Efcab11 protein_coding protein_coding MGP_LPJ_T0000075.1 MGP_LPJ_G0000060.1 mouse_genomes_project 12 116500607 116501038 - MGP_LPJ_P0000075 Ighv3-1 IG_V_gene IG_V_gene MGP_LPJ_T0011342.1 MGP_LPJ_G0009460.1 mouse_genomes_project 12 61252594 61252907 + Gm23213 misc_RNA misc_RNA MGP_LPJ_T0101805.1 MGP_LPJ_G0039842.1 mouse_genomes_project 12 105277109 105279233 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0012846.1 MGP_LPJ_G0010937.1 mouse_genomes_project 12 116361752 116362187 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006414.1 MGP_LPJ_G0005346.1 mouse_genomes_project 12 8703053 8709641 + lincRNA lincRNA MGP_LPJ_T0034591.1 MGP_LPJ_G0019583.1 mouse_genomes_project 12 32556855 32719997 - MGP_LPJ_P0034591 Hdac9 protein_coding protein_coding MGP_LPJ_T0034592.1 MGP_LPJ_G0019583.1 mouse_genomes_project 12 32559179 32719412 - MGP_LPJ_P0034592 Hdac9 protein_coding unknown_likely_coding MGP_LPJ_T0101813.1 MGP_LPJ_G0039850.1 mouse_genomes_project 12 105774583 105779577 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0101817.1 MGP_LPJ_G0039854.1 mouse_genomes_project 12 118750919 118751553 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0034876.1 MGP_LPJ_G0019699.1 mouse_genomes_project 12 69227673 69231027 - Sos2 protein_coding retained_intron MGP_LPJ_T0034877.1 MGP_LPJ_G0019699.1 mouse_genomes_project 12 69227677 69332491 - MGP_LPJ_P0034877 Sos2 protein_coding protein_coding MGP_LPJ_T0034878.1 MGP_LPJ_G0019699.1 mouse_genomes_project 12 69228766 69332480 - MGP_LPJ_P0034878 Sos2 protein_coding protein_coding MGP_LPJ_T0034879.1 MGP_LPJ_G0019699.1 mouse_genomes_project 12 69229002 69332266 - MGP_LPJ_P0034879 Sos2 protein_coding protein_coding MGP_LPJ_T0034880.1 MGP_LPJ_G0019699.1 mouse_genomes_project 12 69229288 69232746 - Sos2 protein_coding retained_intron MGP_LPJ_T0034881.1 MGP_LPJ_G0019699.1 mouse_genomes_project 12 69239755 69242117 - Sos2 protein_coding retained_intron MGP_LPJ_T0034882.1 MGP_LPJ_G0019699.1 mouse_genomes_project 12 69264023 69266696 - Sos2 protein_coding retained_intron MGP_LPJ_T0035519.1 MGP_LPJ_G0019903.1 mouse_genomes_project 12 92737013 92780117 - MGP_LPJ_P0035519 Sel1l protein_coding protein_coding MGP_LPJ_T0035520.1 MGP_LPJ_G0019903.1 mouse_genomes_project 12 92737013 92780117 - MGP_LPJ_P0035520 Sel1l protein_coding protein_coding MGP_LPJ_T0035521.1 MGP_LPJ_G0019903.1 mouse_genomes_project 12 92737035 92744924 - Sel1l protein_coding processed_transcript MGP_LPJ_T0035522.1 MGP_LPJ_G0019903.1 mouse_genomes_project 12 92737593 92780089 - MGP_LPJ_P0035522 Sel1l protein_coding protein_coding MGP_LPJ_T0035523.1 MGP_LPJ_G0019903.1 mouse_genomes_project 12 92739615 92780090 - Sel1l protein_coding retained_intron MGP_LPJ_T0035524.1 MGP_LPJ_G0019903.1 mouse_genomes_project 12 92746467 92749212 - Sel1l protein_coding retained_intron MGP_LPJ_T0035525.1 MGP_LPJ_G0019903.1 mouse_genomes_project 12 92750944 92780090 - Sel1l protein_coding retained_intron MGP_LPJ_T0035526.1 MGP_LPJ_G0019903.1 mouse_genomes_project 12 92755839 92762892 - Sel1l protein_coding retained_intron MGP_LPJ_T0035527.1 MGP_LPJ_G0019903.1 mouse_genomes_project 12 92763134 92780099 - Sel1l protein_coding retained_intron MGP_LPJ_T0035528.1 MGP_LPJ_G0019903.1 mouse_genomes_project 12 92772417 92780100 - Sel1l protein_coding retained_intron MGP_LPJ_T0034835.1 MGP_LPJ_G0019682.1 mouse_genomes_project 12 64636053 64678670 - Mis18bp1 protein_coding retained_intron MGP_LPJ_T0034836.1 MGP_LPJ_G0019682.1 mouse_genomes_project 12 64636053 64678646 - MGP_LPJ_P0034836 Mis18bp1 protein_coding protein_coding MGP_LPJ_T0034837.1 MGP_LPJ_G0019682.1 mouse_genomes_project 12 64639642 64642038 - Mis18bp1 protein_coding retained_intron MGP_LPJ_T0034838.1 MGP_LPJ_G0019682.1 mouse_genomes_project 12 64658903 64661220 - Mis18bp1 protein_coding processed_transcript MGP_LPJ_T0034839.1 MGP_LPJ_G0019682.1 mouse_genomes_project 12 64660843 64678632 - Mis18bp1 protein_coding processed_transcript MGP_LPJ_T0034840.1 MGP_LPJ_G0019682.1 mouse_genomes_project 12 64662145 64678644 - Mis18bp1 protein_coding retained_intron MGP_LPJ_T0000115.1 MGP_LPJ_G0000089.1 mouse_genomes_project 12 117243562 117244031 - MGP_LPJ_P0000115 Ighv1-12 IG_V_gene IG_V_gene MGP_LPJ_T0000116.1 MGP_LPJ_G0000089.1 mouse_genomes_project 12 117243562 117244031 - MGP_LPJ_P0000116 Ighv1-12 IG_V_gene IG_V_gene MGP_LPJ_T0000117.1 MGP_LPJ_G0000089.1 mouse_genomes_project 12 117243562 117243856 - MGP_LPJ_P0000117 Ighv1-12 IG_V_gene IG_V_gene MGP_LPJ_T0034526.1 MGP_LPJ_G0019562.1 mouse_genomes_project 12 29371087 29393271 - MGP_LPJ_P0034526 Dld protein_coding protein_coding MGP_LPJ_T0034875.1 MGP_LPJ_G0019698.1 mouse_genomes_project 12 69221332 69226946 - MGP_LPJ_P0034875 Vcpkmt protein_coding protein_coding MGP_LPJ_T0034945.1 MGP_LPJ_G0019722.1 mouse_genomes_project 12 71890148 71918273 - MGP_LPJ_P0034945 L3hypdh protein_coding protein_coding MGP_LPJ_T0034946.1 MGP_LPJ_G0019722.1 mouse_genomes_project 12 71893218 71918273 - L3hypdh protein_coding retained_intron MGP_LPJ_T0034947.1 MGP_LPJ_G0019722.1 mouse_genomes_project 12 71893986 71917852 - L3hypdh protein_coding processed_transcript MGP_LPJ_T0035990.1 MGP_LPJ_G0020064.1 mouse_genomes_project 12 115157019 115169631 - MGP_LPJ_P0035990 Gpr132 protein_coding protein_coding MGP_LPJ_T0034973.1 MGP_LPJ_G0019731.1 mouse_genomes_project 12 72778370 72814740 - MGP_LPJ_P0034973 protein_coding protein_coding MGP_LPJ_T0034974.1 MGP_LPJ_G0019731.1 mouse_genomes_project 12 72778370 72814594 - MGP_LPJ_P0034974 protein_coding protein_coding MGP_LPJ_T0034975.1 MGP_LPJ_G0019731.1 mouse_genomes_project 12 72790381 72803665 - protein_coding retained_intron MGP_LPJ_T0034976.1 MGP_LPJ_G0019731.1 mouse_genomes_project 12 72803425 72814691 - MGP_LPJ_P0034976 protein_coding nonsense_mediated_decay MGP_LPJ_T0034977.1 MGP_LPJ_G0019731.1 mouse_genomes_project 12 72808452 72837306 - MGP_LPJ_P0034977 protein_coding protein_coding MGP_LPJ_T0034978.1 MGP_LPJ_G0019731.1 mouse_genomes_project 12 72809980 72834733 - MGP_LPJ_P0034978 protein_coding protein_coding MGP_LPJ_T0034979.1 MGP_LPJ_G0019731.1 mouse_genomes_project 12 72809984 72836615 - MGP_LPJ_P0034979 protein_coding protein_coding MGP_LPJ_T0100223.1 MGP_LPJ_G0038486.1 mouse_genomes_project 12 66110439 66110558 - Gm23826 snoRNA snoRNA MGP_LPJ_T0009799.1 MGP_LPJ_G0007917.1 mouse_genomes_project 12 28446352 28446456 - Gm25865 miRNA miRNA MGP_LPJ_T0009843.1 MGP_LPJ_G0007961.1 mouse_genomes_project 12 111360859 111360926 - Gm25297 miRNA miRNA MGP_LPJ_T0034359.1 MGP_LPJ_G0019500.1 mouse_genomes_project 12 8448496 8449063 - MGP_LPJ_P0034359 Msgn1 protein_coding protein_coding MGP_LPJ_T0099001.1 MGP_LPJ_G0037264.1 mouse_genomes_project 12 99822377 99822440 + Gm25486 snRNA snRNA MGP_LPJ_T0012817.1 MGP_LPJ_G0010908.1 mouse_genomes_project 12 82995903 82996146 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009864.1 MGP_LPJ_G0007982.1 mouse_genomes_project 12 111677925 111678004 + Mir370 miRNA miRNA MGP_LPJ_T0006471.1 MGP_LPJ_G0005394.1 mouse_genomes_project 12 106622848 106623490 - Gm28875 lincRNA lincRNA MGP_LPJ_T0035944.1 MGP_LPJ_G0020045.1 mouse_genomes_project 12 114062945 114080162 + MGP_LPJ_P0035944 Zfyve21 protein_coding protein_coding MGP_LPJ_T0003409.1 MGP_LPJ_G0003133.1 mouse_genomes_project 12 55614551 55705762 + Gm26973 antisense antisense MGP_LPJ_T0003410.1 MGP_LPJ_G0003133.1 mouse_genomes_project 12 55617607 55652917 + Gm26973 antisense antisense MGP_LPJ_T0003411.1 MGP_LPJ_G0003133.1 mouse_genomes_project 12 55617658 55705799 + Gm26973 antisense antisense MGP_LPJ_T0003440.1 MGP_LPJ_G0003158.1 mouse_genomes_project 12 105426117 105428997 + B430119L08Rik antisense antisense MGP_LPJ_T0000304.1 MGP_LPJ_G0000242.1 mouse_genomes_project 12 118304917 118443093 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0035349.1 MGP_LPJ_G0019856.1 mouse_genomes_project 12 85862705 85869842 + MGP_LPJ_P0035349 Eif2b2 protein_coding protein_coding MGP_LPJ_T0035350.1 MGP_LPJ_G0019856.1 mouse_genomes_project 12 85862728 85866056 + MGP_LPJ_P0035350 Eif2b2 protein_coding protein_coding MGP_LPJ_T0035351.1 MGP_LPJ_G0019856.1 mouse_genomes_project 12 85862737 85869364 + MGP_LPJ_P0035351 Eif2b2 protein_coding protein_coding MGP_LPJ_T0035352.1 MGP_LPJ_G0019856.1 mouse_genomes_project 12 85862739 85863174 + Eif2b2 protein_coding retained_intron MGP_LPJ_T0035353.1 MGP_LPJ_G0019856.1 mouse_genomes_project 12 85862770 85866043 + Eif2b2 protein_coding retained_intron MGP_LPJ_T0035354.1 MGP_LPJ_G0019856.1 mouse_genomes_project 12 85862806 85866705 + Eif2b2 protein_coding retained_intron MGP_LPJ_T0035355.1 MGP_LPJ_G0019856.1 mouse_genomes_project 12 85867739 85869707 + Eif2b2 protein_coding retained_intron MGP_LPJ_T0035734.1 MGP_LPJ_G0019976.1 mouse_genomes_project 12 105959394 105967051 + MGP_LPJ_P0035734 Serpina3k protein_coding protein_coding MGP_LPJ_T0035009.1 MGP_LPJ_G0019745.1 mouse_genomes_project 12 74281796 74282985 - MGP_LPJ_P0035009 Gm11042 protein_coding protein_coding MGP_LPJ_T0034828.1 MGP_LPJ_G0019676.1 mouse_genomes_project 12 64411006 64417674 + MGP_LPJ_P0034828 Gm527 protein_coding protein_coding MGP_LPJ_T0006462.1 MGP_LPJ_G0005385.1 mouse_genomes_project 12 91676144 91688501 + Gm26512 lincRNA lincRNA MGP_LPJ_T0012824.1 MGP_LPJ_G0010915.1 mouse_genomes_project 12 92821428 92822287 - processed_pseudogene processed_pseudogene MGP_LPJ_T0035719.1 MGP_LPJ_G0019968.1 mouse_genomes_project 12 105698600 105705024 + MGP_LPJ_P0035719 Serpina5 protein_coding protein_coding MGP_LPJ_T0000888.1 MGP_LPJ_G0000817.1 mouse_genomes_project 12 9912664 9913197 + TEC TEC MGP_LPJ_T0098962.1 MGP_LPJ_G0037225.1 mouse_genomes_project 12 10026366 10026473 + Gm25538 snRNA snRNA MGP_LPJ_T0012789.1 MGP_LPJ_G0010880.1 mouse_genomes_project 12 43482604 43483700 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006469.1 MGP_LPJ_G0005392.1 mouse_genomes_project 12 102432605 102438844 + D130020L05Rik lincRNA lincRNA MGP_LPJ_T0012816.1 MGP_LPJ_G0010907.1 mouse_genomes_project 12 81971555 81971991 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100197.1 MGP_LPJ_G0038460.1 mouse_genomes_project 12 22529299 22529428 + Gm26211 snoRNA snoRNA MGP_LPJ_T0035700.1 MGP_LPJ_G0019958.1 mouse_genomes_project 12 105196403 105206986 - MGP_LPJ_P0035700 Serpina6 protein_coding protein_coding MGP_LPJ_T0035701.1 MGP_LPJ_G0019958.1 mouse_genomes_project 12 105204147 105206876 - MGP_LPJ_P0035701 Serpina6 protein_coding protein_coding MGP_LPJ_T0034305.1 MGP_LPJ_G0019482.1 mouse_genomes_project 12 1841296 1977197 + MGP_LPJ_P0034305 Atad2b protein_coding protein_coding MGP_LPJ_T0034306.1 MGP_LPJ_G0019482.1 mouse_genomes_project 12 1841601 1977197 + MGP_LPJ_P0034306 Atad2b protein_coding unknown_likely_coding MGP_LPJ_T0003435.1 MGP_LPJ_G0003154.1 mouse_genomes_project 12 103598655 103600758 - Gm16339 antisense antisense MGP_LPJ_T0009798.1 MGP_LPJ_G0007916.1 mouse_genomes_project 12 26603614 26603679 + Mir6937 miRNA miRNA MGP_LPJ_T0012809.1 MGP_LPJ_G0010900.1 mouse_genomes_project 12 74316319 74318240 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000074.1 MGP_LPJ_G0000059.1 mouse_genomes_project 12 116464774 116465204 - MGP_LPJ_P0000074 Ighv14-1 IG_V_gene IG_V_gene MGP_LPJ_T0100215.1 MGP_LPJ_G0038478.1 mouse_genomes_project 12 58368747 58368869 + Gm24233 snoRNA snoRNA MGP_LPJ_T0009879.1 MGP_LPJ_G0007997.1 mouse_genomes_project 12 111783654 111783753 + Mir666 miRNA miRNA MGP_LPJ_T0000892.1 MGP_LPJ_G0000821.1 mouse_genomes_project 12 56680379 56684809 + TEC TEC MGP_LPJ_T0036010.1 MGP_LPJ_G0020073.1 mouse_genomes_project 12 115456956 115461891 + MGP_LPJ_P0036010 Crip2 protein_coding protein_coding MGP_LPJ_T0036011.1 MGP_LPJ_G0020073.1 mouse_genomes_project 12 115456956 115461488 + MGP_LPJ_P0036011 Crip2 protein_coding protein_coding MGP_LPJ_T0036012.1 MGP_LPJ_G0020073.1 mouse_genomes_project 12 115459719 115461354 + Crip2 protein_coding retained_intron MGP_LPJ_T0036013.1 MGP_LPJ_G0020073.1 mouse_genomes_project 12 115459854 115460616 + Crip2 protein_coding retained_intron MGP_LPJ_T0036014.1 MGP_LPJ_G0020073.1 mouse_genomes_project 12 115460470 115461089 + Crip2 protein_coding retained_intron MGP_LPJ_T0000309.1 MGP_LPJ_G0000247.1 mouse_genomes_project 12 118740726 118741005 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0097981.1 MGP_LPJ_G0036262.1 mouse_genomes_project 12 33208714 33210332 + pseudogene pseudogene MGP_LPJ_T0035163.1 MGP_LPJ_G0019804.1 mouse_genomes_project 12 81872450 81912737 - MGP_LPJ_P0035163 Synj2bp protein_coding protein_coding MGP_LPJ_T0035164.1 MGP_LPJ_G0019804.1 mouse_genomes_project 12 81877459 81880787 - Synj2bp protein_coding retained_intron MGP_LPJ_T0035165.1 MGP_LPJ_G0019804.1 mouse_genomes_project 12 81879945 81887255 - MGP_LPJ_P0035165 Synj2bp protein_coding protein_coding MGP_LPJ_T0035166.1 MGP_LPJ_G0019804.1 mouse_genomes_project 12 81880075 81912706 - MGP_LPJ_P0035166 Synj2bp protein_coding protein_coding MGP_LPJ_T0009877.1 MGP_LPJ_G0007995.1 mouse_genomes_project 12 111782146 111782220 + Mir679 miRNA miRNA MGP_LPJ_T0035788.1 MGP_LPJ_G0020000.1 mouse_genomes_project 12 109845503 109953276 - MGP_LPJ_P0035788 Bcl11b protein_coding protein_coding MGP_LPJ_T0035789.1 MGP_LPJ_G0020000.1 mouse_genomes_project 12 109852092 109953088 - MGP_LPJ_P0035789 Bcl11b protein_coding protein_coding MGP_LPJ_T0035790.1 MGP_LPJ_G0020000.1 mouse_genomes_project 12 109852092 109953088 - MGP_LPJ_P0035790 Bcl11b protein_coding protein_coding MGP_LPJ_T0035625.1 MGP_LPJ_G0019933.1 mouse_genomes_project 12 103762268 103876316 + MGP_LPJ_P0035625 Rin3 protein_coding protein_coding MGP_LPJ_T0035626.1 MGP_LPJ_G0019933.1 mouse_genomes_project 12 103762387 103847590 + MGP_LPJ_P0035626 Rin3 protein_coding protein_coding MGP_LPJ_T0035627.1 MGP_LPJ_G0019933.1 mouse_genomes_project 12 103762388 103809626 + MGP_LPJ_P0035627 Rin3 protein_coding protein_coding MGP_LPJ_T0035628.1 MGP_LPJ_G0019933.1 mouse_genomes_project 12 103764119 103876316 + MGP_LPJ_P0035628 Rin3 protein_coding protein_coding MGP_LPJ_T0035629.1 MGP_LPJ_G0019933.1 mouse_genomes_project 12 103839270 103846029 + Rin3 protein_coding processed_transcript MGP_LPJ_T0035630.1 MGP_LPJ_G0019933.1 mouse_genomes_project 12 103839270 103853100 + Rin3 protein_coding processed_transcript MGP_LPJ_T0035631.1 MGP_LPJ_G0019933.1 mouse_genomes_project 12 103839305 103843754 + Rin3 protein_coding retained_intron MGP_LPJ_T0035887.1 MGP_LPJ_G0020028.1 mouse_genomes_project 12 113210353 113283116 + MGP_LPJ_P0035887 Rcor1 protein_coding protein_coding MGP_LPJ_T0006439.1 MGP_LPJ_G0005366.1 mouse_genomes_project 12 69943953 69951071 + F730035M05Rik lincRNA lincRNA MGP_LPJ_T0035577.1 MGP_LPJ_G0019918.1 mouse_genomes_project 12 101428040 101463418 - MGP_LPJ_P0035577 Nrde2 protein_coding protein_coding MGP_LPJ_T0100241.1 MGP_LPJ_G0038504.1 mouse_genomes_project 12 111708336 111708410 + Gm24895 snoRNA snoRNA MGP_LPJ_T0006449.1 MGP_LPJ_G0005372.1 mouse_genomes_project 12 80392514 80404785 - 2310015A10Rik lincRNA lincRNA MGP_LPJ_T0034379.1 MGP_LPJ_G0019514.1 mouse_genomes_project 12 14181666 14271421 - MGP_LPJ_P0034379 Greb1 protein_coding protein_coding MGP_LPJ_T0034380.1 MGP_LPJ_G0019514.1 mouse_genomes_project 12 14181666 14321832 - MGP_LPJ_P0034380 Greb1 protein_coding protein_coding MGP_LPJ_T0034381.1 MGP_LPJ_G0019514.1 mouse_genomes_project 12 14183158 14271375 - MGP_LPJ_P0034381 Greb1 protein_coding protein_coding MGP_LPJ_T0034382.1 MGP_LPJ_G0019514.1 mouse_genomes_project 12 14184888 14186120 - Greb1 protein_coding retained_intron MGP_LPJ_T0034383.1 MGP_LPJ_G0019514.1 mouse_genomes_project 12 14193055 14201033 - Greb1 protein_coding retained_intron MGP_LPJ_T0034384.1 MGP_LPJ_G0019514.1 mouse_genomes_project 12 14200761 14254483 - Greb1 protein_coding retained_intron MGP_LPJ_T0034385.1 MGP_LPJ_G0019514.1 mouse_genomes_project 12 14213339 14220315 - Greb1 protein_coding retained_intron MGP_LPJ_T0034386.1 MGP_LPJ_G0019514.1 mouse_genomes_project 12 14218431 14220726 - Greb1 protein_coding retained_intron MGP_LPJ_T0034387.1 MGP_LPJ_G0019514.1 mouse_genomes_project 12 14218442 14220866 - MGP_LPJ_P0034387 Greb1 protein_coding protein_coding MGP_LPJ_T0034388.1 MGP_LPJ_G0019514.1 mouse_genomes_project 12 14220177 14224045 - MGP_LPJ_P0034388 Greb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0034389.1 MGP_LPJ_G0019514.1 mouse_genomes_project 12 14235443 14254384 - Greb1 protein_coding retained_intron MGP_LPJ_T0034390.1 MGP_LPJ_G0019514.1 mouse_genomes_project 12 14247529 14322029 - MGP_LPJ_P0034390 Greb1 protein_coding protein_coding MGP_LPJ_T0035708.1 MGP_LPJ_G0019962.1 mouse_genomes_project 12 105331485 105336319 - MGP_LPJ_P0035708 protein_coding protein_coding MGP_LPJ_T0034342.1 MGP_LPJ_G0019493.1 mouse_genomes_project 12 6080721 6113021 + MGP_LPJ_P0034342 Matn3 protein_coding protein_coding MGP_LPJ_T0009873.1 MGP_LPJ_G0007991.1 mouse_genomes_project 12 111779077 111779163 + Mir323 miRNA miRNA MGP_LPJ_T0098131.1 MGP_LPJ_G0036412.1 mouse_genomes_project 12 9399542 9399673 + Gm26171 rRNA rRNA MGP_LPJ_T0035332.1 MGP_LPJ_G0019850.1 mouse_genomes_project 12 85594103 85607137 + MGP_LPJ_P0035332 Fcf1 protein_coding protein_coding MGP_LPJ_T0035333.1 MGP_LPJ_G0019850.1 mouse_genomes_project 12 85594187 85607125 + MGP_LPJ_P0035333 Fcf1 protein_coding protein_coding MGP_LPJ_T0035334.1 MGP_LPJ_G0019850.1 mouse_genomes_project 12 85604043 85607131 + Fcf1 protein_coding retained_intron MGP_LPJ_T0009909.1 MGP_LPJ_G0008027.1 mouse_genomes_project 12 111815328 111815411 + Mir3072 miRNA miRNA MGP_LPJ_T0035729.1 MGP_LPJ_G0019973.1 mouse_genomes_project 12 105838943 105856386 + MGP_LPJ_P0035729 protein_coding protein_coding MGP_LPJ_T0035730.1 MGP_LPJ_G0019973.1 mouse_genomes_project 12 105838943 105856380 + MGP_LPJ_P0035730 protein_coding protein_coding MGP_LPJ_T0011346.1 MGP_LPJ_G0009464.1 mouse_genomes_project 12 70690611 70690921 + Gm24857 misc_RNA misc_RNA MGP_LPJ_T0009841.1 MGP_LPJ_G0007959.1 mouse_genomes_project 12 110733325 110733402 - Gm23872 miRNA miRNA MGP_LPJ_T0098486.1 MGP_LPJ_G0036764.1 mouse_genomes_project 12 43521367 43534619 - Gm15902 sense_intronic sense_intronic MGP_LPJ_T0035255.1 MGP_LPJ_G0019829.1 mouse_genomes_project 12 84678430 84707583 + Dnal1 protein_coding processed_transcript MGP_LPJ_T0035256.1 MGP_LPJ_G0019829.1 mouse_genomes_project 12 84678430 84712081 + MGP_LPJ_P0035256 Dnal1 protein_coding protein_coding MGP_LPJ_T0035257.1 MGP_LPJ_G0019829.1 mouse_genomes_project 12 84678435 84706202 + MGP_LPJ_P0035257 Dnal1 protein_coding protein_coding MGP_LPJ_T0035258.1 MGP_LPJ_G0019829.1 mouse_genomes_project 12 84678454 84709426 + MGP_LPJ_P0035258 Dnal1 protein_coding nonsense_mediated_decay MGP_LPJ_T0035259.1 MGP_LPJ_G0019829.1 mouse_genomes_project 12 84678455 84701764 + MGP_LPJ_P0035259 Dnal1 protein_coding protein_coding MGP_LPJ_T0035260.1 MGP_LPJ_G0019829.1 mouse_genomes_project 12 84694711 84716062 + Dnal1 protein_coding retained_intron MGP_LPJ_T0035261.1 MGP_LPJ_G0019829.1 mouse_genomes_project 12 84703387 84704827 + MGP_LPJ_P0035261 Dnal1 protein_coding protein_coding MGP_LPJ_T0000275.1 MGP_LPJ_G0000213.1 mouse_genomes_project 12 116419160 116419457 - IG_V_pseudogene IG_V_pseudogene MGP_LPJ_T0035819.1 MGP_LPJ_G0020010.1 mouse_genomes_project 12 110847564 110857575 - MGP_LPJ_P0035819 Slc25a29 protein_coding protein_coding MGP_LPJ_T0035820.1 MGP_LPJ_G0020010.1 mouse_genomes_project 12 110848915 110853309 - Slc25a29 protein_coding retained_intron MGP_LPJ_T0035821.1 MGP_LPJ_G0020010.1 mouse_genomes_project 12 110852635 110857512 - Slc25a29 protein_coding retained_intron MGP_LPJ_T0017245.1 MGP_LPJ_G0015147.1 mouse_genomes_project 12 81912793 81933582 + 6530401F13Rik processed_transcript processed_transcript MGP_LPJ_T0035057.1 MGP_LPJ_G0019762.1 mouse_genomes_project 12 76632636 76680090 + MGP_LPJ_P0035057 Plekhg3 protein_coding protein_coding MGP_LPJ_T0035058.1 MGP_LPJ_G0019762.1 mouse_genomes_project 12 76647362 76679469 + MGP_LPJ_P0035058 Plekhg3 protein_coding unknown_likely_coding MGP_LPJ_T0034468.1 MGP_LPJ_G0019539.1 mouse_genomes_project 12 24098547 24212797 - MGP_LPJ_P0034468 Rnf144a protein_coding protein_coding MGP_LPJ_T0034469.1 MGP_LPJ_G0019539.1 mouse_genomes_project 12 24098547 24212797 - MGP_LPJ_P0034469 Rnf144a protein_coding protein_coding MGP_LPJ_T0034534.1 MGP_LPJ_G0019564.1 mouse_genomes_project 12 29529199 29547974 - MGP_LPJ_P0034534 Cbll1 protein_coding protein_coding MGP_LPJ_T0034535.1 MGP_LPJ_G0019564.1 mouse_genomes_project 12 29529306 29547974 - MGP_LPJ_P0034535 Cbll1 protein_coding protein_coding MGP_LPJ_T0034536.1 MGP_LPJ_G0019564.1 mouse_genomes_project 12 29531577 29547974 - MGP_LPJ_P0034536 Cbll1 protein_coding protein_coding MGP_LPJ_T0034537.1 MGP_LPJ_G0019564.1 mouse_genomes_project 12 29532285 29547915 - MGP_LPJ_P0034537 Cbll1 protein_coding protein_coding MGP_LPJ_T0034538.1 MGP_LPJ_G0019564.1 mouse_genomes_project 12 29532295 29547913 - MGP_LPJ_P0034538 Cbll1 protein_coding protein_coding MGP_LPJ_T0035366.1 MGP_LPJ_G0019863.1 mouse_genomes_project 12 86120204 86123623 + MGP_LPJ_P0035366 Fos protein_coding protein_coding MGP_LPJ_T0035367.1 MGP_LPJ_G0019863.1 mouse_genomes_project 12 86121005 86122535 + Fos protein_coding processed_transcript MGP_LPJ_T0035368.1 MGP_LPJ_G0019863.1 mouse_genomes_project 12 86121005 86122357 + Fos protein_coding processed_transcript MGP_LPJ_T0035369.1 MGP_LPJ_G0019863.1 mouse_genomes_project 12 86121225 86122413 + Fos protein_coding processed_transcript MGP_LPJ_T0035348.1 MGP_LPJ_G0019855.1 mouse_genomes_project 12 85804791 85815589 - MGP_LPJ_P0035348 Pgf protein_coding protein_coding MGP_LPJ_T0006497.1 MGP_LPJ_G0005411.1 mouse_genomes_project 12 111597412 111598338 + lincRNA lincRNA MGP_LPJ_T0034842.1 MGP_LPJ_G0019684.1 mouse_genomes_project 12 65819816 65820839 - MGP_LPJ_P0034842 Rpl10l protein_coding protein_coding MGP_LPJ_T0035324.1 MGP_LPJ_G0019849.1 mouse_genomes_project 12 85539280 85594031 - MGP_LPJ_P0035324 Arel1 protein_coding nonsense_mediated_decay MGP_LPJ_T0035325.1 MGP_LPJ_G0019849.1 mouse_genomes_project 12 85539282 85594107 - MGP_LPJ_P0035325 Arel1 protein_coding protein_coding MGP_LPJ_T0035326.1 MGP_LPJ_G0019849.1 mouse_genomes_project 12 85556817 85566571 - MGP_LPJ_P0035326 Arel1 protein_coding nonsense_mediated_decay MGP_LPJ_T0035327.1 MGP_LPJ_G0019849.1 mouse_genomes_project 12 85562713 85570116 - MGP_LPJ_P0035327 Arel1 protein_coding protein_coding MGP_LPJ_T0035328.1 MGP_LPJ_G0019849.1 mouse_genomes_project 12 85564313 85568591 - MGP_LPJ_P0035328 Arel1 protein_coding protein_coding MGP_LPJ_T0035329.1 MGP_LPJ_G0019849.1 mouse_genomes_project 12 85564334 85594063 - MGP_LPJ_P0035329 Arel1 protein_coding protein_coding MGP_LPJ_T0035330.1 MGP_LPJ_G0019849.1 mouse_genomes_project 12 85564343 85594045 - MGP_LPJ_P0035330 Arel1 protein_coding protein_coding MGP_LPJ_T0035331.1 MGP_LPJ_G0019849.1 mouse_genomes_project 12 85574274 85589221 - Arel1 protein_coding processed_transcript MGP_LPJ_T0009820.1 MGP_LPJ_G0007938.1 mouse_genomes_project 12 76632210 76632289 - Mir5135 miRNA miRNA MGP_LPJ_T0034499.1 MGP_LPJ_G0019553.1 mouse_genomes_project 12 28040767 28109820 - MGP_LPJ_P0034499 Tpo protein_coding protein_coding MGP_LPJ_T0034500.1 MGP_LPJ_G0019553.1 mouse_genomes_project 12 28069897 28072759 - Tpo protein_coding retained_intron MGP_LPJ_T0034501.1 MGP_LPJ_G0019553.1 mouse_genomes_project 12 28093895 28109092 - MGP_LPJ_P0034501 Tpo protein_coding protein_coding MGP_LPJ_T0000889.1 MGP_LPJ_G0000818.1 mouse_genomes_project 12 23363679 23402684 - TEC TEC MGP_LPJ_T0035894.1 MGP_LPJ_G0020031.1 mouse_genomes_project 12 113443240 113448553 + MGP_LPJ_P0035894 Amn protein_coding protein_coding MGP_LPJ_T0035785.1 MGP_LPJ_G0019998.1 mouse_genomes_project 12 107815259 107884816 + MGP_LPJ_P0035785 Vrk1 protein_coding protein_coding MGP_LPJ_T0035786.1 MGP_LPJ_G0019998.1 mouse_genomes_project 12 107816255 107887188 + MGP_LPJ_P0035786 Vrk1 protein_coding protein_coding MGP_LPJ_T0035616.1 MGP_LPJ_G0019930.1 mouse_genomes_project 12 103378619 103417742 - MGP_LPJ_P0035616 Atxn3 protein_coding protein_coding MGP_LPJ_T0035617.1 MGP_LPJ_G0019930.1 mouse_genomes_project 12 103382797 103394069 - MGP_LPJ_P0035617 Atxn3 protein_coding nonsense_mediated_decay MGP_LPJ_T0035618.1 MGP_LPJ_G0019930.1 mouse_genomes_project 12 103392638 103417739 - MGP_LPJ_P0035618 Atxn3 protein_coding protein_coding MGP_LPJ_T0035619.1 MGP_LPJ_G0019930.1 mouse_genomes_project 12 103392640 103417739 - MGP_LPJ_P0035619 Atxn3 protein_coding protein_coding MGP_LPJ_T0035620.1 MGP_LPJ_G0019930.1 mouse_genomes_project 12 103392663 103417644 - MGP_LPJ_P0035620 Atxn3 protein_coding protein_coding MGP_LPJ_T0098970.1 MGP_LPJ_G0037233.1 mouse_genomes_project 12 50585957 50586059 - Gm22663 snRNA snRNA MGP_LPJ_T0034281.1 MGP_LPJ_G0019470.1 mouse_genomes_project 12 1136337 1375323 - MGP_LPJ_P0034281 Ncoa1 protein_coding protein_coding MGP_LPJ_T0000137.1 MGP_LPJ_G0000100.1 mouse_genomes_project 12 118874472 118874905 - MGP_LPJ_P0000137 IG_V_gene IG_V_gene MGP_LPJ_T0009846.1 MGP_LPJ_G0007964.1 mouse_genomes_project 12 111627751 111627842 + Mir673 miRNA miRNA MGP_LPJ_T0035244.1 MGP_LPJ_G0019821.1 mouse_genomes_project 12 84491227 84491893 - MGP_LPJ_P0035244 Gm26571 protein_coding protein_coding MGP_LPJ_T0009793.1 MGP_LPJ_G0007911.1 mouse_genomes_project 12 8549057 8549115 + Mir7675 miRNA miRNA MGP_LPJ_T0035737.1 MGP_LPJ_G0019978.1 mouse_genomes_project 12 106066130 106077162 + MGP_LPJ_P0035737 Serpina3n protein_coding unknown_likely_coding MGP_LPJ_T0035738.1 MGP_LPJ_G0019978.1 mouse_genomes_project 12 106066196 106077152 + MGP_LPJ_P0035738 Serpina3n protein_coding protein_coding MGP_LPJ_T0035121.1 MGP_LPJ_G0019791.1 mouse_genomes_project 12 80943927 80954221 - MGP_LPJ_P0035121 Erh protein_coding protein_coding MGP_LPJ_T0035122.1 MGP_LPJ_G0019791.1 mouse_genomes_project 12 80944262 80953712 - MGP_LPJ_P0035122 Erh protein_coding protein_coding MGP_LPJ_T0099008.1 MGP_LPJ_G0037271.1 mouse_genomes_project 12 121507540 121507647 - Gm25577 snRNA snRNA MGP_LPJ_T0000035.1 MGP_LPJ_G0000028.1 mouse_genomes_project 12 115878992 115879002 - IG_D_pseudogene IG_D_pseudogene MGP_LPJ_T0034316.1 MGP_LPJ_G0019489.1 mouse_genomes_project 12 5614862 5704435 - MGP_LPJ_P0034316 Slc7a15 protein_coding protein_coding MGP_LPJ_T0034317.1 MGP_LPJ_G0019489.1 mouse_genomes_project 12 5615724 5626126 - MGP_LPJ_P0034317 Slc7a15 protein_coding protein_coding MGP_LPJ_T0034318.1 MGP_LPJ_G0019489.1 mouse_genomes_project 12 5624781 5626147 - Slc7a15 protein_coding processed_transcript MGP_LPJ_T0098487.1 MGP_LPJ_G0036765.1 mouse_genomes_project 12 55684838 55688790 + C87198 sense_intronic sense_intronic MGP_LPJ_T0098488.1 MGP_LPJ_G0036765.1 mouse_genomes_project 12 55684848 55688318 + C87198 sense_intronic sense_intronic MGP_LPJ_T0009794.1 MGP_LPJ_G0007912.1 mouse_genomes_project 12 12470991 12471101 - Gm27682 miRNA miRNA MGP_LPJ_T0098999.1 MGP_LPJ_G0037262.1 mouse_genomes_project 12 94740016 94740177 + Gm23249 snRNA snRNA MGP_LPJ_T0006415.1 MGP_LPJ_G0005347.1 mouse_genomes_project 12 10124570 10130871 + Platr19 lincRNA lincRNA MGP_LPJ_T0035927.1 MGP_LPJ_G0020043.1 mouse_genomes_project 12 114002617 114054331 + MGP_LPJ_P0035927 Klc1 protein_coding protein_coding MGP_LPJ_T0035928.1 MGP_LPJ_G0020043.1 mouse_genomes_project 12 114002724 114042475 + MGP_LPJ_P0035928 Klc1 protein_coding protein_coding MGP_LPJ_T0035929.1 MGP_LPJ_G0020043.1 mouse_genomes_project 12 114002781 114054283 + MGP_LPJ_P0035929 Klc1 protein_coding protein_coding MGP_LPJ_T0035930.1 MGP_LPJ_G0020043.1 mouse_genomes_project 12 114015973 114042473 + MGP_LPJ_P0035930 Klc1 protein_coding protein_coding MGP_LPJ_T0035931.1 MGP_LPJ_G0020043.1 mouse_genomes_project 12 114027319 114055400 + MGP_LPJ_P0035931 Klc1 protein_coding protein_coding MGP_LPJ_T0035932.1 MGP_LPJ_G0020043.1 mouse_genomes_project 12 114032847 114035332 + Klc1 protein_coding retained_intron MGP_LPJ_T0035933.1 MGP_LPJ_G0020043.1 mouse_genomes_project 12 114036871 114041976 + Klc1 protein_coding processed_transcript MGP_LPJ_T0035934.1 MGP_LPJ_G0020043.1 mouse_genomes_project 12 114042929 114054282 + Klc1 protein_coding retained_intron MGP_LPJ_T0035940.1 MGP_LPJ_G0020043.1 mouse_genomes_project 12 114053059 114054267 + Klc1 protein_coding retained_intron MGP_LPJ_T0035044.1 MGP_LPJ_G0019756.1 mouse_genomes_project 12 76405326 76414367 + MGP_LPJ_P0035044 Akap5 protein_coding protein_coding MGP_LPJ_T0035045.1 MGP_LPJ_G0019756.1 mouse_genomes_project 12 76405326 76414369 + MGP_LPJ_P0035045 Akap5 protein_coding protein_coding MGP_LPJ_T0035046.1 MGP_LPJ_G0019756.1 mouse_genomes_project 12 76405340 76410390 + MGP_LPJ_P0035046 Akap5 protein_coding protein_coding MGP_LPJ_T0011368.1 MGP_LPJ_G0009486.1 mouse_genomes_project 13 44218756 44219099 - Gm23755 misc_RNA misc_RNA MGP_LPJ_T0036368.1 MGP_LPJ_G0020222.1 mouse_genomes_project 13 19892998 19893895 + MGP_LPJ_P0036368 Vmn1r197 protein_coding protein_coding MGP_LPJ_T0036733.1 MGP_LPJ_G0020400.1 mouse_genomes_project 13 40825577 40962220 + MGP_LPJ_P0036733 Hivep1 protein_coding protein_coding MGP_LPJ_T0017307.1 MGP_LPJ_G0015175.1 mouse_genomes_project 13 114129298 114200967 + Gm15286 processed_transcript processed_transcript MGP_LPJ_T0017308.1 MGP_LPJ_G0015175.1 mouse_genomes_project 13 114172261 114198972 + Gm15286 processed_transcript processed_transcript MGP_LPJ_T0037997.1 MGP_LPJ_G0020820.1 mouse_genomes_project 13 110058625 110226802 - MGP_LPJ_P0037997 Zswim6 protein_coding protein_coding MGP_LPJ_T0037622.1 MGP_LPJ_G0020700.1 mouse_genomes_project 13 90857662 90932535 + MGP_LPJ_P0037622 Hapln1 protein_coding protein_coding MGP_LPJ_T0036954.1 MGP_LPJ_G0020476.1 mouse_genomes_project 13 54129036 54139042 - MGP_LPJ_P0036954 Thoc3 protein_coding protein_coding MGP_LPJ_T0036955.1 MGP_LPJ_G0020476.1 mouse_genomes_project 13 54133874 54138981 - Thoc3 protein_coding processed_transcript MGP_LPJ_T0036956.1 MGP_LPJ_G0020476.1 mouse_genomes_project 13 54137997 54139019 - Thoc3 protein_coding retained_intron MGP_LPJ_T0037244.1 MGP_LPJ_G0020555.1 mouse_genomes_project 13 60215169 60216171 + MGP_LPJ_P0037244 Gm5084 protein_coding protein_coding MGP_LPJ_T0011380.1 MGP_LPJ_G0009498.1 mouse_genomes_project 13 110881757 110881950 - Gm28016 misc_RNA misc_RNA MGP_LPJ_T0036130.1 MGP_LPJ_G0020119.1 mouse_genomes_project 13 5538951 5600758 - MGP_LPJ_P0036130 Wdr37 protein_coding protein_coding MGP_LPJ_T0036131.1 MGP_LPJ_G0020119.1 mouse_genomes_project 13 5538978 5600072 - MGP_LPJ_P0036131 Wdr37 protein_coding protein_coding MGP_LPJ_T0036132.1 MGP_LPJ_G0020119.1 mouse_genomes_project 13 5541720 5576226 - MGP_LPJ_P0036132 Wdr37 protein_coding nonsense_mediated_decay MGP_LPJ_T0036133.1 MGP_LPJ_G0020119.1 mouse_genomes_project 13 5548410 5578151 - MGP_LPJ_P0036133 Wdr37 protein_coding nonsense_mediated_decay MGP_LPJ_T0036134.1 MGP_LPJ_G0020119.1 mouse_genomes_project 13 5548468 5582242 - MGP_LPJ_P0036134 Wdr37 protein_coding protein_coding MGP_LPJ_T0036135.1 MGP_LPJ_G0020119.1 mouse_genomes_project 13 5563956 5565796 - Wdr37 protein_coding retained_intron MGP_LPJ_T0036136.1 MGP_LPJ_G0020119.1 mouse_genomes_project 13 5571396 5587283 - MGP_LPJ_P0036136 Wdr37 protein_coding protein_coding MGP_LPJ_T0036137.1 MGP_LPJ_G0020119.1 mouse_genomes_project 13 5576268 5600764 - MGP_LPJ_P0036137 Wdr37 protein_coding protein_coding MGP_LPJ_T0036138.1 MGP_LPJ_G0020119.1 mouse_genomes_project 13 5578135 5589646 - MGP_LPJ_P0036138 Wdr37 protein_coding nonsense_mediated_decay MGP_LPJ_T0036139.1 MGP_LPJ_G0020119.1 mouse_genomes_project 13 5579076 5600051 - MGP_LPJ_P0036139 Wdr37 protein_coding protein_coding MGP_LPJ_T0036140.1 MGP_LPJ_G0020119.1 mouse_genomes_project 13 5581203 5600007 - MGP_LPJ_P0036140 Wdr37 protein_coding protein_coding MGP_LPJ_T0036141.1 MGP_LPJ_G0020119.1 mouse_genomes_project 13 5581206 5589643 - MGP_LPJ_P0036141 Wdr37 protein_coding protein_coding MGP_LPJ_T0036142.1 MGP_LPJ_G0020119.1 mouse_genomes_project 13 5581859 5600022 - Wdr37 protein_coding processed_transcript MGP_LPJ_T0036143.1 MGP_LPJ_G0020119.1 mouse_genomes_project 13 5582207 5587296 - Wdr37 protein_coding processed_transcript MGP_LPJ_T0036144.1 MGP_LPJ_G0020119.1 mouse_genomes_project 13 5585439 5600938 - MGP_LPJ_P0036144 Wdr37 protein_coding protein_coding MGP_LPJ_T0036145.1 MGP_LPJ_G0020119.1 mouse_genomes_project 13 5589556 5600035 - MGP_LPJ_P0036145 Wdr37 protein_coding protein_coding MGP_LPJ_T0036337.1 MGP_LPJ_G0020200.1 mouse_genomes_project 13 19295157 19299044 - MGP_LPJ_P0036337 Hist1h3i protein_coding protein_coding MGP_LPJ_T0012927.1 MGP_LPJ_G0011018.1 mouse_genomes_project 13 70577888 70578299 - processed_pseudogene processed_pseudogene MGP_LPJ_T0036869.1 MGP_LPJ_G0020448.1 mouse_genomes_project 13 48854047 48882659 + MGP_LPJ_P0036869 Nol8 protein_coding protein_coding MGP_LPJ_T0036480.1 MGP_LPJ_G0020286.1 mouse_genomes_project 13 22628148 22640596 + MGP_LPJ_P0036480 Tdp2 protein_coding protein_coding MGP_LPJ_T0036481.1 MGP_LPJ_G0020286.1 mouse_genomes_project 13 22628291 22635385 + Tdp2 protein_coding processed_transcript MGP_LPJ_T0036595.1 MGP_LPJ_G0020344.1 mouse_genomes_project 13 31505328 31516613 + MGP_LPJ_P0036595 protein_coding protein_coding MGP_LPJ_T0036203.1 MGP_LPJ_G0020136.1 mouse_genomes_project 13 10585346 10643111 + MGP_LPJ_P0036203 Nid1 protein_coding protein_coding MGP_LPJ_T0100295.1 MGP_LPJ_G0038558.1 mouse_genomes_project 13 87243472 87243532 - Gm22574 snoRNA snoRNA MGP_LPJ_T0037870.1 MGP_LPJ_G0020785.1 mouse_genomes_project 13 102058245 102122289 - MGP_LPJ_P0037870 Naip2 protein_coding protein_coding MGP_LPJ_T0037871.1 MGP_LPJ_G0020785.1 mouse_genomes_project 13 102058245 102117355 - MGP_LPJ_P0037871 Naip2 protein_coding protein_coding MGP_LPJ_T0037872.1 MGP_LPJ_G0020785.1 mouse_genomes_project 13 102058413 102122160 - MGP_LPJ_P0037872 Naip2 protein_coding protein_coding MGP_LPJ_T0003448.1 MGP_LPJ_G0003165.1 mouse_genomes_project 13 19282985 19284338 + Gm11274 antisense antisense MGP_LPJ_T0037829.1 MGP_LPJ_G0020770.1 mouse_genomes_project 13 100304560 100307214 - MGP_LPJ_P0037829 Gm10320 protein_coding protein_coding MGP_LPJ_T0100299.1 MGP_LPJ_G0038562.1 mouse_genomes_project 13 96910555 96910687 + Gm22661 snoRNA snoRNA MGP_LPJ_T0006560.1 MGP_LPJ_G0005446.1 mouse_genomes_project 13 29765676 29766878 + Gm11378 lincRNA lincRNA MGP_LPJ_T0036204.1 MGP_LPJ_G0020137.1 mouse_genomes_project 13 10726762 10928432 + MGP_LPJ_P0036204 Lyst protein_coding protein_coding MGP_LPJ_T0036357.1 MGP_LPJ_G0020211.1 mouse_genomes_project 13 19585187 19585898 + MGP_LPJ_P0036357 protein_coding protein_coding MGP_LPJ_T0036199.1 MGP_LPJ_G0020133.1 mouse_genomes_project 13 9335266 9386461 - MGP_LPJ_P0036199 Edaradd protein_coding protein_coding MGP_LPJ_T0037330.1 MGP_LPJ_G0020592.1 mouse_genomes_project 13 65442535 65443483 + MGP_LPJ_P0037330 Olfr465-ps1 protein_coding protein_coding MGP_LPJ_T0002613.1 MGP_LPJ_G0002510.1 mouse_genomes_project 13 16587044 16587618 + MGP_LPJ_P0002613 Tcrg-V6 TR_V_gene TR_V_gene MGP_LPJ_T0002614.1 MGP_LPJ_G0002510.1 mouse_genomes_project 13 16587056 16587618 + MGP_LPJ_P0002614 Tcrg-V6 TR_V_gene TR_V_gene MGP_LPJ_T0036590.1 MGP_LPJ_G0020341.1 mouse_genomes_project 13 31308027 31319769 + MGP_LPJ_P0036590 Serpinb1b protein_coding protein_coding MGP_LPJ_T0037974.1 MGP_LPJ_G0020814.1 mouse_genomes_project 13 107294670 107449925 - MGP_LPJ_P0037974 Rnf180 protein_coding unknown_likely_coding MGP_LPJ_T0037975.1 MGP_LPJ_G0020814.1 mouse_genomes_project 13 107313415 107449925 - MGP_LPJ_P0037975 Rnf180 protein_coding protein_coding MGP_LPJ_T0037972.1 MGP_LPJ_G0020812.1 mouse_genomes_project 13 107108860 107218807 - MGP_LPJ_P0037972 Rgs7bp protein_coding protein_coding MGP_LPJ_T0006656.1 MGP_LPJ_G0005514.1 mouse_genomes_project 13 114422194 114423704 + Gm15324 lincRNA lincRNA MGP_LPJ_T0037759.1 MGP_LPJ_G0020744.1 mouse_genomes_project 13 97063036 97064400 - MGP_LPJ_P0037759 S100z protein_coding protein_coding MGP_LPJ_T0017297.1 MGP_LPJ_G0015168.1 mouse_genomes_project 13 33585555 33588038 + 1700011B04Rik processed_transcript retained_intron MGP_LPJ_T0017298.1 MGP_LPJ_G0015168.1 mouse_genomes_project 13 33586910 33593290 + 1700011B04Rik processed_transcript lincRNA MGP_LPJ_T0012926.1 MGP_LPJ_G0011017.1 mouse_genomes_project 13 70353527 70353816 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000932.1 MGP_LPJ_G0000860.1 mouse_genomes_project 13 103791902 103794071 - TEC TEC MGP_LPJ_T0003467.1 MGP_LPJ_G0003180.1 mouse_genomes_project 13 41590201 41596953 - Gm15810 antisense antisense MGP_LPJ_T0003491.1 MGP_LPJ_G0003195.1 mouse_genomes_project 13 71155376 71158208 + 1700100L14Rik antisense antisense MGP_LPJ_T0003492.1 MGP_LPJ_G0003195.1 mouse_genomes_project 13 71155415 71158203 + 1700100L14Rik antisense antisense MGP_LPJ_T0037720.1 MGP_LPJ_G0020733.1 mouse_genomes_project 13 95559493 95700329 + MGP_LPJ_P0037720 Lhfpl2 protein_coding protein_coding MGP_LPJ_T0037721.1 MGP_LPJ_G0020733.1 mouse_genomes_project 13 95559529 95626696 + Lhfpl2 protein_coding retained_intron MGP_LPJ_T0037722.1 MGP_LPJ_G0020733.1 mouse_genomes_project 13 95585319 95678493 + MGP_LPJ_P0037722 Lhfpl2 protein_coding protein_coding MGP_LPJ_T0037723.1 MGP_LPJ_G0020733.1 mouse_genomes_project 13 95638851 95678179 + MGP_LPJ_P0037723 Lhfpl2 protein_coding protein_coding MGP_LPJ_T0037724.1 MGP_LPJ_G0020733.1 mouse_genomes_project 13 95676662 95699437 + MGP_LPJ_P0037724 Lhfpl2 protein_coding protein_coding MGP_LPJ_T0037725.1 MGP_LPJ_G0020733.1 mouse_genomes_project 13 95677626 95678066 + Lhfpl2 protein_coding processed_transcript MGP_LPJ_T0037726.1 MGP_LPJ_G0020733.1 mouse_genomes_project 13 95677844 95700329 + MGP_LPJ_P0037726 Lhfpl2 protein_coding protein_coding MGP_LPJ_T0006628.1 MGP_LPJ_G0005491.1 mouse_genomes_project 13 84994705 85034453 + 2810049E08Rik lincRNA lincRNA MGP_LPJ_T0037793.1 MGP_LPJ_G0020757.1 mouse_genomes_project 13 98619255 98645363 + MGP_LPJ_P0037793 Gcnt4 protein_coding protein_coding MGP_LPJ_T0101848.1 MGP_LPJ_G0039885.1 mouse_genomes_project 13 22102682 22103745 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0036369.1 MGP_LPJ_G0020223.1 mouse_genomes_project 13 19914820 19915723 + MGP_LPJ_P0036369 Vmn1r198 protein_coding protein_coding MGP_LPJ_T0012936.1 MGP_LPJ_G0011027.1 mouse_genomes_project 13 81012124 81013284 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099033.1 MGP_LPJ_G0037296.1 mouse_genomes_project 13 64596964 64597052 - Gm25654 snRNA snRNA MGP_LPJ_T0003477.1 MGP_LPJ_G0003188.1 mouse_genomes_project 13 58191460 58209482 + Gm26555 antisense antisense MGP_LPJ_T0003478.1 MGP_LPJ_G0003188.1 mouse_genomes_project 13 58191460 58206925 + Gm26555 antisense antisense MGP_LPJ_T0003479.1 MGP_LPJ_G0003188.1 mouse_genomes_project 13 58191468 58209483 + Gm26555 antisense antisense MGP_LPJ_T0036703.1 MGP_LPJ_G0020386.1 mouse_genomes_project 13 39408515 39424402 - MGP_LPJ_P0036703 Tfap2a protein_coding protein_coding MGP_LPJ_T0036704.1 MGP_LPJ_G0020386.1 mouse_genomes_project 13 39409529 39429584 - MGP_LPJ_P0036704 Tfap2a protein_coding protein_coding MGP_LPJ_T0100287.1 MGP_LPJ_G0038550.1 mouse_genomes_project 13 76507147 76507230 + Gm23012 snoRNA snoRNA MGP_LPJ_T0036901.1 MGP_LPJ_G0020460.1 mouse_genomes_project 13 51145099 51179779 + MGP_LPJ_P0036901 Secisbp2 protein_coding protein_coding MGP_LPJ_T0036902.1 MGP_LPJ_G0020460.1 mouse_genomes_project 13 51145143 51160614 + MGP_LPJ_P0036902 Secisbp2 protein_coding protein_coding MGP_LPJ_T0036903.1 MGP_LPJ_G0020460.1 mouse_genomes_project 13 51145199 51151569 + Secisbp2 protein_coding processed_transcript MGP_LPJ_T0036904.1 MGP_LPJ_G0020460.1 mouse_genomes_project 13 51145199 51159703 + Secisbp2 protein_coding processed_transcript MGP_LPJ_T0036905.1 MGP_LPJ_G0020460.1 mouse_genomes_project 13 51175467 51178264 + Secisbp2 protein_coding retained_intron MGP_LPJ_T0036906.1 MGP_LPJ_G0020460.1 mouse_genomes_project 13 51177507 51179224 + Secisbp2 protein_coding retained_intron MGP_LPJ_T0101819.1 MGP_LPJ_G0039856.1 mouse_genomes_project 13 19607421 19607935 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0037556.1 MGP_LPJ_G0020690.1 mouse_genomes_project 13 82647242 82661317 + MGP_LPJ_P0037556 Lysmd3 protein_coding protein_coding MGP_LPJ_T0036667.1 MGP_LPJ_G0020371.1 mouse_genomes_project 13 35336558 35521898 - MGP_LPJ_P0036667 F13a1 protein_coding protein_coding MGP_LPJ_T0036668.1 MGP_LPJ_G0020371.1 mouse_genomes_project 13 35336558 35522923 - MGP_LPJ_P0036668 F13a1 protein_coding protein_coding MGP_LPJ_T0012951.1 MGP_LPJ_G0011042.1 mouse_genomes_project 13 113887942 113888415 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000919.1 MGP_LPJ_G0000847.1 mouse_genomes_project 13 71670491 71673676 - TEC TEC MGP_LPJ_T0099028.1 MGP_LPJ_G0037291.1 mouse_genomes_project 13 43945480 43945584 - Gm23104 snRNA snRNA MGP_LPJ_T0006660.1 MGP_LPJ_G0005517.1 mouse_genomes_project 13 114577484 114589962 + Gm15323 lincRNA lincRNA MGP_LPJ_T0037323.1 MGP_LPJ_G0020588.1 mouse_genomes_project 13 65234695 65240556 + MGP_LPJ_P0037323 Spata31 protein_coding protein_coding MGP_LPJ_T0017303.1 MGP_LPJ_G0015172.1 mouse_genomes_project 13 81833713 81835014 - 1700023H06Rik processed_transcript processed_transcript MGP_LPJ_T0038090.1 MGP_LPJ_G0020851.1 mouse_genomes_project 13 115952137 116038711 + MGP_LPJ_P0038090 BC067074 protein_coding protein_coding MGP_LPJ_T0038091.1 MGP_LPJ_G0020851.1 mouse_genomes_project 13 116008472 116039709 + MGP_LPJ_P0038091 BC067074 protein_coding protein_coding MGP_LPJ_T0038092.1 MGP_LPJ_G0020851.1 mouse_genomes_project 13 116018411 116048702 + MGP_LPJ_P0038092 BC067074 protein_coding protein_coding MGP_LPJ_T0036972.1 MGP_LPJ_G0020479.1 mouse_genomes_project 13 54256221 54262329 + MGP_LPJ_P0036972 Arl10 protein_coding protein_coding MGP_LPJ_T0036973.1 MGP_LPJ_G0020479.1 mouse_genomes_project 13 54256253 54260217 + MGP_LPJ_P0036973 Arl10 protein_coding protein_coding MGP_LPJ_T0036974.1 MGP_LPJ_G0020479.1 mouse_genomes_project 13 54259581 54260110 + Arl10 protein_coding processed_transcript MGP_LPJ_T0036975.1 MGP_LPJ_G0020479.1 mouse_genomes_project 13 54260012 54260738 + MGP_LPJ_P0036975 Arl10 protein_coding protein_coding MGP_LPJ_T0036754.1 MGP_LPJ_G0020405.1 mouse_genomes_project 13 42205069 42224120 + MGP_LPJ_P0036754 Sirt5 protein_coding protein_coding MGP_LPJ_T0101863.1 MGP_LPJ_G0039900.1 mouse_genomes_project 13 32139691 32140615 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0038086.1 MGP_LPJ_G0020849.1 mouse_genomes_project 13 115835551 115895423 - MGP_LPJ_P0038086 Gzmk protein_coding protein_coding MGP_LPJ_T0038087.1 MGP_LPJ_G0020849.1 mouse_genomes_project 13 115835581 115846705 - MGP_LPJ_P0038087 Gzmk protein_coding protein_coding MGP_LPJ_T0038088.1 MGP_LPJ_G0020849.1 mouse_genomes_project 13 115835735 115846729 - MGP_LPJ_P0038088 Gzmk protein_coding nonsense_mediated_decay MGP_LPJ_T0101853.1 MGP_LPJ_G0039890.1 mouse_genomes_project 13 31336625 31338673 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0037058.1 MGP_LPJ_G0020495.1 mouse_genomes_project 13 54880784 54895973 + MGP_LPJ_P0037058 Fgfr4 protein_coding protein_coding MGP_LPJ_T0037059.1 MGP_LPJ_G0020495.1 mouse_genomes_project 13 54883825 54884812 + Fgfr4 protein_coding processed_transcript MGP_LPJ_T0037060.1 MGP_LPJ_G0020495.1 mouse_genomes_project 13 54884273 54885061 + Fgfr4 protein_coding retained_intron MGP_LPJ_T0099023.1 MGP_LPJ_G0037286.1 mouse_genomes_project 13 38504923 38505088 - Gm23972 snRNA snRNA MGP_LPJ_T0037763.1 MGP_LPJ_G0020748.1 mouse_genomes_project 13 97306917 97312804 + MGP_LPJ_P0037763 F2rl2 protein_coding protein_coding MGP_LPJ_T0037856.1 MGP_LPJ_G0020783.1 mouse_genomes_project 13 102023131 102029164 + MGP_LPJ_P0037856 Serf1 protein_coding protein_coding MGP_LPJ_T0037857.1 MGP_LPJ_G0020783.1 mouse_genomes_project 13 102023204 102025935 + MGP_LPJ_P0037857 Serf1 protein_coding protein_coding MGP_LPJ_T0037858.1 MGP_LPJ_G0020783.1 mouse_genomes_project 13 102023274 102029497 + MGP_LPJ_P0037858 Serf1 protein_coding protein_coding MGP_LPJ_T0037859.1 MGP_LPJ_G0020783.1 mouse_genomes_project 13 102023460 102029164 + MGP_LPJ_P0037859 Serf1 protein_coding protein_coding MGP_LPJ_T0037860.1 MGP_LPJ_G0020783.1 mouse_genomes_project 13 102023515 102029157 + MGP_LPJ_P0037860 Serf1 protein_coding protein_coding MGP_LPJ_T0037945.1 MGP_LPJ_G0020802.1 mouse_genomes_project 13 106130181 106222801 - MGP_LPJ_P0037945 Nln protein_coding protein_coding MGP_LPJ_T0100301.1 MGP_LPJ_G0038564.1 mouse_genomes_project 13 107397949 107398079 - Gm25631 snoRNA snoRNA MGP_LPJ_T0038122.1 MGP_LPJ_G0020868.1 mouse_genomes_project 13 121614038 121740389 + Fgf10 protein_coding processed_transcript MGP_LPJ_T0038123.1 MGP_LPJ_G0020868.1 mouse_genomes_project 13 121614071 121732607 + Fgf10 protein_coding processed_transcript MGP_LPJ_T0038124.1 MGP_LPJ_G0020868.1 mouse_genomes_project 13 121662442 121743136 + MGP_LPJ_P0038124 Fgf10 protein_coding protein_coding MGP_LPJ_T0037116.1 MGP_LPJ_G0020518.1 mouse_genomes_project 13 55481969 55538951 + MGP_LPJ_P0037116 Pcbd2 protein_coding protein_coding MGP_LPJ_T0037117.1 MGP_LPJ_G0020518.1 mouse_genomes_project 13 55481969 55538949 + MGP_LPJ_P0037117 Pcbd2 protein_coding protein_coding MGP_LPJ_T0009962.1 MGP_LPJ_G0008080.1 mouse_genomes_project 13 63537614 63537687 + Mir27b miRNA miRNA MGP_LPJ_T0003523.1 MGP_LPJ_G0003209.1 mouse_genomes_project 13 104838619 104842500 + Gm17160 antisense antisense MGP_LPJ_T0003486.1 MGP_LPJ_G0003192.1 mouse_genomes_project 13 67738611 67751371 + antisense antisense MGP_LPJ_T0037533.1 MGP_LPJ_G0020687.1 mouse_genomes_project 13 79027446 79038550 - MGP_LPJ_P0037533 Nr2f1 protein_coding protein_coding MGP_LPJ_T0037534.1 MGP_LPJ_G0020687.1 mouse_genomes_project 13 79027625 79035513 - MGP_LPJ_P0037534 Nr2f1 protein_coding protein_coding MGP_LPJ_T0037535.1 MGP_LPJ_G0020687.1 mouse_genomes_project 13 79028145 79036405 - MGP_LPJ_P0037535 Nr2f1 protein_coding protein_coding MGP_LPJ_T0037536.1 MGP_LPJ_G0020687.1 mouse_genomes_project 13 79028206 79034847 - MGP_LPJ_P0037536 Nr2f1 protein_coding protein_coding MGP_LPJ_T0037537.1 MGP_LPJ_G0020687.1 mouse_genomes_project 13 79028345 79028917 - Nr2f1 protein_coding processed_transcript MGP_LPJ_T0006617.1 MGP_LPJ_G0005486.1 mouse_genomes_project 13 81921085 81927118 - Gm4211 lincRNA lincRNA MGP_LPJ_T0037711.1 MGP_LPJ_G0020726.1 mouse_genomes_project 13 94890935 94968369 - MGP_LPJ_P0037711 Jmy protein_coding unknown_likely_coding MGP_LPJ_T0017286.1 MGP_LPJ_G0015163.1 mouse_genomes_project 13 21265115 21269071 - Gm11335 processed_transcript processed_transcript MGP_LPJ_T0006633.1 MGP_LPJ_G0005496.1 mouse_genomes_project 13 97778752 97779719 + Gm29543 lincRNA lincRNA MGP_LPJ_T0101822.1 MGP_LPJ_G0039859.1 mouse_genomes_project 13 19743165 19743930 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0037258.1 MGP_LPJ_G0020566.1 mouse_genomes_project 13 61186660 61194732 - MGP_LPJ_P0037258 Ctsr protein_coding protein_coding MGP_LPJ_T0036942.1 MGP_LPJ_G0020467.1 mouse_genomes_project 13 52542666 52556495 - MGP_LPJ_P0036942 Nfil3 protein_coding protein_coding MGP_LPJ_T0100292.1 MGP_LPJ_G0038555.1 mouse_genomes_project 13 78496194 78496325 + Gm26088 snoRNA snoRNA MGP_LPJ_T0009931.1 MGP_LPJ_G0008049.1 mouse_genomes_project 13 18896336 18896397 - Mir6942 miRNA miRNA MGP_LPJ_T0006585.1 MGP_LPJ_G0005465.1 mouse_genomes_project 13 48140069 48143765 + Fam120aos lincRNA lincRNA MGP_LPJ_T0036323.1 MGP_LPJ_G0020187.1 mouse_genomes_project 13 19130981 19131966 - MGP_LPJ_P0036323 Olfr1362 protein_coding protein_coding MGP_LPJ_T0036681.1 MGP_LPJ_G0020374.1 mouse_genomes_project 13 36525568 36549066 - MGP_LPJ_P0036681 Ssr1 protein_coding protein_coding MGP_LPJ_T0006552.1 MGP_LPJ_G0005442.1 mouse_genomes_project 13 29496543 29515382 - G630018N14Rik lincRNA lincRNA MGP_LPJ_T0006553.1 MGP_LPJ_G0005442.1 mouse_genomes_project 13 29508713 29514010 - G630018N14Rik lincRNA lincRNA MGP_LPJ_T0037400.1 MGP_LPJ_G0020628.1 mouse_genomes_project 13 68248707 68261045 + MGP_LPJ_P0037400 Zfp493 protein_coding protein_coding MGP_LPJ_T0037401.1 MGP_LPJ_G0020628.1 mouse_genomes_project 13 68248707 68258272 + MGP_LPJ_P0037401 Zfp493 protein_coding protein_coding MGP_LPJ_T0037402.1 MGP_LPJ_G0020628.1 mouse_genomes_project 13 68255152 68259117 + Zfp493 protein_coding retained_intron MGP_LPJ_T0037410.1 MGP_LPJ_G0020635.1 mouse_genomes_project 13 70046758 70085332 - MGP_LPJ_P0037410 Papd7 protein_coding protein_coding MGP_LPJ_T0037411.1 MGP_LPJ_G0020635.1 mouse_genomes_project 13 70046761 70082423 - MGP_LPJ_P0037411 Papd7 protein_coding protein_coding MGP_LPJ_T0099015.1 MGP_LPJ_G0037278.1 mouse_genomes_project 13 19002638 19002702 - Gm23779 snRNA snRNA MGP_LPJ_T0036366.1 MGP_LPJ_G0020220.1 mouse_genomes_project 13 19840904 19841852 + MGP_LPJ_P0036366 Vmn1r195 protein_coding protein_coding MGP_LPJ_T0099040.1 MGP_LPJ_G0037303.1 mouse_genomes_project 13 102542029 102542133 + Gm24261 snRNA snRNA MGP_LPJ_T0017287.1 MGP_LPJ_G0015164.1 mouse_genomes_project 13 21508305 21509719 - 4930558J22Rik processed_transcript processed_transcript MGP_LPJ_T0037063.1 MGP_LPJ_G0020498.1 mouse_genomes_project 13 55054756 55057973 + MGP_LPJ_P0037063 Prelid1 protein_coding protein_coding MGP_LPJ_T0006528.1 MGP_LPJ_G0005423.1 mouse_genomes_project 13 6146414 6150983 + Gm26601 lincRNA lincRNA MGP_LPJ_T0037502.1 MGP_LPJ_G0020675.1 mouse_genomes_project 13 76658911 76670560 + MGP_LPJ_P0037502 Glrx protein_coding protein_coding MGP_LPJ_T0009972.1 MGP_LPJ_G0008090.1 mouse_genomes_project 13 95287480 95287541 + Mir5624 miRNA miRNA MGP_LPJ_T0009940.1 MGP_LPJ_G0008058.1 mouse_genomes_project 13 26750858 26750951 - Mir6368 miRNA miRNA MGP_LPJ_T0038076.1 MGP_LPJ_G0020843.1 mouse_genomes_project 13 115622454 115625453 + MGP_LPJ_P0038076 Ccno protein_coding protein_coding MGP_LPJ_T0036863.1 MGP_LPJ_G0020443.1 mouse_genomes_project 13 48664000 48853444 - MGP_LPJ_P0036863 Cenpp protein_coding protein_coding MGP_LPJ_T0036813.1 MGP_LPJ_G0020427.1 mouse_genomes_project 13 46117722 46131392 - Dek protein_coding processed_transcript MGP_LPJ_T0036814.1 MGP_LPJ_G0020427.1 mouse_genomes_project 13 46117729 46139129 - MGP_LPJ_P0036814 Dek protein_coding protein_coding MGP_LPJ_T0036815.1 MGP_LPJ_G0020427.1 mouse_genomes_project 13 46121544 46139140 - MGP_LPJ_P0036815 Dek protein_coding protein_coding MGP_LPJ_T0036816.1 MGP_LPJ_G0020427.1 mouse_genomes_project 13 46131108 46138769 - MGP_LPJ_P0036816 Dek protein_coding protein_coding MGP_LPJ_T0036817.1 MGP_LPJ_G0020427.1 mouse_genomes_project 13 46134429 46139093 - Dek protein_coding processed_transcript MGP_LPJ_T0036818.1 MGP_LPJ_G0020427.1 mouse_genomes_project 13 46138324 46139122 - Dek protein_coding processed_transcript MGP_LPJ_T0006562.1 MGP_LPJ_G0005448.1 mouse_genomes_project 13 33362282 33381842 + Gm16984 lincRNA lincRNA MGP_LPJ_T0006563.1 MGP_LPJ_G0005448.1 mouse_genomes_project 13 33362335 33391144 + Gm16984 lincRNA lincRNA MGP_LPJ_T0003495.1 MGP_LPJ_G0003197.1 mouse_genomes_project 13 74737160 74738355 - Gm15912 antisense antisense MGP_LPJ_T0037423.1 MGP_LPJ_G0020640.1 mouse_genomes_project 13 71170748 71221220 - MGP_LPJ_P0037423 Ice1 protein_coding protein_coding MGP_LPJ_T0036362.1 MGP_LPJ_G0020216.1 mouse_genomes_project 13 19747025 19747922 - MGP_LPJ_P0036362 Vmn1r191 protein_coding protein_coding MGP_LPJ_T0099019.1 MGP_LPJ_G0037282.1 mouse_genomes_project 13 28251721 28251905 - Gm23206 snRNA snRNA MGP_LPJ_T0036714.1 MGP_LPJ_G0020390.1 mouse_genomes_project 13 39747907 39799760 - MGP_LPJ_P0036714 Mak protein_coding protein_coding MGP_LPJ_T0036715.1 MGP_LPJ_G0020390.1 mouse_genomes_project 13 39747907 39790520 - MGP_LPJ_P0036715 Mak protein_coding protein_coding MGP_LPJ_T0036716.1 MGP_LPJ_G0020390.1 mouse_genomes_project 13 39747907 39799760 - MGP_LPJ_P0036716 Mak protein_coding protein_coding MGP_LPJ_T0036081.1 MGP_LPJ_G0020099.1 mouse_genomes_project 13 395060 396581 + MGP_LPJ_P0036081 Calm4 protein_coding protein_coding MGP_LPJ_T0037480.1 MGP_LPJ_G0020666.1 mouse_genomes_project 13 75038703 75052908 - MGP_LPJ_P0037480 Pdcd6 protein_coding protein_coding MGP_LPJ_T0101838.1 MGP_LPJ_G0039875.1 mouse_genomes_project 13 20578289 20579191 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0101830.1 MGP_LPJ_G0039867.1 mouse_genomes_project 13 20158116 20158841 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0037946.1 MGP_LPJ_G0020803.1 mouse_genomes_project 13 106222959 106245265 + MGP_LPJ_P0037946 Sgtb protein_coding protein_coding MGP_LPJ_T0037947.1 MGP_LPJ_G0020803.1 mouse_genomes_project 13 106223002 106255664 + MGP_LPJ_P0037947 Sgtb protein_coding protein_coding MGP_LPJ_T0006632.1 MGP_LPJ_G0005495.1 mouse_genomes_project 13 95641369 95644040 - Gm15907 lincRNA lincRNA MGP_LPJ_T0006654.1 MGP_LPJ_G0005512.1 mouse_genomes_project 13 114061066 114091435 - Gm15290 lincRNA lincRNA MGP_LPJ_T0036336.1 MGP_LPJ_G0020199.1 mouse_genomes_project 13 19292129 19292871 - MGP_LPJ_P0036336 Hist1h1b protein_coding protein_coding MGP_LPJ_T0012870.1 MGP_LPJ_G0010961.1 mouse_genomes_project 13 19490518 19491094 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006607.1 MGP_LPJ_G0005478.1 mouse_genomes_project 13 67979088 67986955 + 9430065F17Rik lincRNA lincRNA MGP_LPJ_T0006608.1 MGP_LPJ_G0005478.1 mouse_genomes_project 13 67979117 67989879 + 9430065F17Rik lincRNA lincRNA MGP_LPJ_T0036780.1 MGP_LPJ_G0020414.1 mouse_genomes_project 13 44318398 44341072 + MGP_LPJ_P0036780 Mylip protein_coding protein_coding MGP_LPJ_T0101823.1 MGP_LPJ_G0039860.1 mouse_genomes_project 13 19867397 19868264 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0037141.1 MGP_LPJ_G0020530.1 mouse_genomes_project 13 56424586 56455491 + MGP_LPJ_P0037141 Tgfbi protein_coding protein_coding MGP_LPJ_T0037309.1 MGP_LPJ_G0020580.1 mouse_genomes_project 13 64424164 64444439 - MGP_LPJ_P0037309 Zfp367 protein_coding protein_coding MGP_LPJ_T0037310.1 MGP_LPJ_G0020580.1 mouse_genomes_project 13 64426550 64443666 - Zfp367 protein_coding processed_transcript MGP_LPJ_T0037311.1 MGP_LPJ_G0020580.1 mouse_genomes_project 13 64426677 64441452 - Zfp367 protein_coding processed_transcript MGP_LPJ_T0037312.1 MGP_LPJ_G0020580.1 mouse_genomes_project 13 64431623 64444439 - MGP_LPJ_P0037312 Zfp367 protein_coding protein_coding MGP_LPJ_T0037694.1 MGP_LPJ_G0020721.1 mouse_genomes_project 13 94191758 94236022 - MGP_LPJ_P0037694 Thbs4 protein_coding protein_coding MGP_LPJ_T0037695.1 MGP_LPJ_G0020721.1 mouse_genomes_project 13 94213364 94215180 - Thbs4 protein_coding retained_intron MGP_LPJ_T0038151.1 MGP_LPJ_G0020880.1 mouse_genomes_project 13 122855376 122856156 - MGP_LPJ_P0038151 protein_coding protein_coding MGP_LPJ_T0036080.1 MGP_LPJ_G0020098.1 mouse_genomes_project 13 389205 389758 + MGP_LPJ_P0036080 Calm5 protein_coding protein_coding MGP_LPJ_T0017300.1 MGP_LPJ_G0015170.1 mouse_genomes_project 13 59748954 59750929 + Etohd2 processed_transcript processed_transcript MGP_LPJ_T0017301.1 MGP_LPJ_G0015170.1 mouse_genomes_project 13 59748955 59752670 + Etohd2 processed_transcript processed_transcript MGP_LPJ_T0099017.1 MGP_LPJ_G0037280.1 mouse_genomes_project 13 22268920 22269023 - Gm22013 snRNA snRNA MGP_LPJ_T0036520.1 MGP_LPJ_G0020305.1 mouse_genomes_project 13 25400223 25407004 - MGP_LPJ_P0036520 Prl8a8 protein_coding protein_coding MGP_LPJ_T0036521.1 MGP_LPJ_G0020305.1 mouse_genomes_project 13 25400327 25407002 - MGP_LPJ_P0036521 Prl8a8 protein_coding protein_coding MGP_LPJ_T0037717.1 MGP_LPJ_G0020731.1 mouse_genomes_project 13 95157649 95245008 + MGP_LPJ_P0037717 Dmgdh protein_coding protein_coding MGP_LPJ_T0037718.1 MGP_LPJ_G0020731.1 mouse_genomes_project 13 95195894 95196517 + Dmgdh protein_coding processed_transcript MGP_LPJ_T0099020.1 MGP_LPJ_G0037283.1 mouse_genomes_project 13 29895036 29895144 - Gm25186 snRNA snRNA MGP_LPJ_T0011373.1 MGP_LPJ_G0009491.1 mouse_genomes_project 13 56523466 56523591 + Gm27834 misc_RNA misc_RNA MGP_LPJ_T0038047.1 MGP_LPJ_G0020832.1 mouse_genomes_project 13 114249908 114278564 + MGP_LPJ_P0038047 Mier3 protein_coding protein_coding MGP_LPJ_T0038048.1 MGP_LPJ_G0020832.1 mouse_genomes_project 13 114250055 114255380 + Mier3 protein_coding retained_intron MGP_LPJ_T0038049.1 MGP_LPJ_G0020832.1 mouse_genomes_project 13 114250056 114278561 + MGP_LPJ_P0038049 Mier3 protein_coding nonsense_mediated_decay MGP_LPJ_T0038050.1 MGP_LPJ_G0020832.1 mouse_genomes_project 13 114250076 114275115 + MGP_LPJ_P0038050 Mier3 protein_coding protein_coding MGP_LPJ_T0036274.1 MGP_LPJ_G0020162.1 mouse_genomes_project 13 17158342 17163879 - MGP_LPJ_P0036274 A530099J19Rik protein_coding protein_coding MGP_LPJ_T0037986.1 MGP_LPJ_G0020817.1 mouse_genomes_project 13 109222278 109237031 + MGP_LPJ_P0037986 Dimt1 protein_coding protein_coding MGP_LPJ_T0037987.1 MGP_LPJ_G0020817.1 mouse_genomes_project 13 109222354 109235618 + MGP_LPJ_P0037987 Dimt1 protein_coding unknown_likely_coding MGP_LPJ_T0036421.1 MGP_LPJ_G0020265.1 mouse_genomes_project 13 21490436 21491998 + MGP_LPJ_P0036421 Hist1h1c protein_coding protein_coding MGP_LPJ_T0006541.1 MGP_LPJ_G0005434.1 mouse_genomes_project 13 27005827 27014420 + Gm26735 lincRNA lincRNA MGP_LPJ_T0009958.1 MGP_LPJ_G0008076.1 mouse_genomes_project 13 61717910 61718018 - Gm23739 miRNA miRNA MGP_LPJ_T0036335.1 MGP_LPJ_G0020198.1 mouse_genomes_project 13 19269823 19270360 - MGP_LPJ_P0036335 Hist1h2ak protein_coding protein_coding MGP_LPJ_T0036832.1 MGP_LPJ_G0020435.1 mouse_genomes_project 13 48044044 48139856 - MGP_LPJ_P0036832 Fam120a protein_coding protein_coding MGP_LPJ_T0036821.1 MGP_LPJ_G0020429.1 mouse_genomes_project 13 47381624 47384234 + MGP_LPJ_P0036821 Id4 protein_coding protein_coding MGP_LPJ_T0037430.1 MGP_LPJ_G0020644.1 mouse_genomes_project 13 73277927 73284436 + MGP_LPJ_P0037430 Irx2 protein_coding protein_coding MGP_LPJ_T0037431.1 MGP_LPJ_G0020644.1 mouse_genomes_project 13 73278078 73280963 + Irx2 protein_coding processed_transcript MGP_LPJ_T0037432.1 MGP_LPJ_G0020644.1 mouse_genomes_project 13 73280062 73281118 + MGP_LPJ_P0037432 Irx2 protein_coding protein_coding MGP_LPJ_T0037433.1 MGP_LPJ_G0020644.1 mouse_genomes_project 13 73282322 73283851 + Irx2 protein_coding retained_intron MGP_LPJ_T0037434.1 MGP_LPJ_G0020644.1 mouse_genomes_project 13 73282834 73284008 + MGP_LPJ_P0037434 Irx2 protein_coding protein_coding MGP_LPJ_T0006583.1 MGP_LPJ_G0005463.1 mouse_genomes_project 13 47393145 47394600 - A330048O09Rik lincRNA lincRNA MGP_LPJ_T0009929.1 MGP_LPJ_G0008047.1 mouse_genomes_project 13 5649346 5649449 - Gm22750 miRNA miRNA MGP_LPJ_T0036075.1 MGP_LPJ_G0020096.1 mouse_genomes_project 13 180054 198414 + MGP_LPJ_P0036075 Asb13 protein_coding protein_coding MGP_LPJ_T0036076.1 MGP_LPJ_G0020096.1 mouse_genomes_project 13 180111 180805 + Asb13 protein_coding processed_transcript MGP_LPJ_T0036077.1 MGP_LPJ_G0020096.1 mouse_genomes_project 13 180120 197156 + Asb13 protein_coding processed_transcript MGP_LPJ_T0036078.1 MGP_LPJ_G0020096.1 mouse_genomes_project 13 180121 188716 + Asb13 protein_coding retained_intron MGP_LPJ_T0036256.1 MGP_LPJ_G0020157.1 mouse_genomes_project 13 16356342 16547711 + MGP_LPJ_P0036256 Amph protein_coding protein_coding MGP_LPJ_T0036257.1 MGP_LPJ_G0020157.1 mouse_genomes_project 13 16356362 16547714 + MGP_LPJ_P0036257 Amph protein_coding protein_coding MGP_LPJ_T0036258.1 MGP_LPJ_G0020157.1 mouse_genomes_project 13 16356389 16499790 + Amph protein_coding retained_intron MGP_LPJ_T0036259.1 MGP_LPJ_G0020157.1 mouse_genomes_project 13 16515842 16517749 + Amph protein_coding retained_intron MGP_LPJ_T0036260.1 MGP_LPJ_G0020157.1 mouse_genomes_project 13 16517513 16539290 + Amph protein_coding processed_transcript MGP_LPJ_T0100285.1 MGP_LPJ_G0038548.1 mouse_genomes_project 13 65456807 65456958 + Gm24130 snoRNA snoRNA MGP_LPJ_T0100273.1 MGP_LPJ_G0038536.1 mouse_genomes_project 13 33705490 33705621 - Gm22674 snoRNA snoRNA MGP_LPJ_T0037233.1 MGP_LPJ_G0020548.1 mouse_genomes_project 13 59659244 59665929 - MGP_LPJ_P0037233 4921517D22Rik protein_coding protein_coding MGP_LPJ_T0012916.1 MGP_LPJ_G0011007.1 mouse_genomes_project 13 62994009 62994345 + processed_pseudogene processed_pseudogene MGP_LPJ_T0036532.1 MGP_LPJ_G0020313.1 mouse_genomes_project 13 25722557 25729633 + MGP_LPJ_P0036532 Prl2a1 protein_coding protein_coding MGP_LPJ_T0100283.1 MGP_LPJ_G0038546.1 mouse_genomes_project 13 56754899 56755028 - Gm22777 snoRNA snoRNA MGP_LPJ_T0012922.1 MGP_LPJ_G0011013.1 mouse_genomes_project 13 67868968 67869668 + processed_pseudogene processed_pseudogene MGP_LPJ_T0037318.1 MGP_LPJ_G0020583.1 mouse_genomes_project 13 64593291 64616376 - MGP_LPJ_P0037318 Aaed1 protein_coding protein_coding MGP_LPJ_T0009984.1 MGP_LPJ_G0008102.1 mouse_genomes_project 13 122224625 122224744 - Gm44488 miRNA miRNA MGP_LPJ_T0038041.1 MGP_LPJ_G0020831.1 mouse_genomes_project 13 113963251 114036674 - MGP_LPJ_P0038041 Gpbp1 protein_coding protein_coding MGP_LPJ_T0038042.1 MGP_LPJ_G0020831.1 mouse_genomes_project 13 113963503 114036591 - MGP_LPJ_P0038042 Gpbp1 protein_coding protein_coding MGP_LPJ_T0038043.1 MGP_LPJ_G0020831.1 mouse_genomes_project 13 113963729 114033577 - MGP_LPJ_P0038043 Gpbp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038044.1 MGP_LPJ_G0020831.1 mouse_genomes_project 13 113977018 113992487 - Gpbp1 protein_coding processed_transcript MGP_LPJ_T0038045.1 MGP_LPJ_G0020831.1 mouse_genomes_project 13 113979619 113992446 - Gpbp1 protein_coding processed_transcript MGP_LPJ_T0038046.1 MGP_LPJ_G0020831.1 mouse_genomes_project 13 113979689 113992487 - Gpbp1 protein_coding retained_intron MGP_LPJ_T0006575.1 MGP_LPJ_G0005458.1 mouse_genomes_project 13 43287686 43345630 - Gm27007 lincRNA lincRNA MGP_LPJ_T0012892.1 MGP_LPJ_G0010983.1 mouse_genomes_project 13 24728409 24728715 - processed_pseudogene processed_pseudogene MGP_LPJ_T0037696.1 MGP_LPJ_G0020722.1 mouse_genomes_project 13 94290305 94303749 + MGP_LPJ_P0037696 Mtx3 protein_coding protein_coding MGP_LPJ_T0036584.1 MGP_LPJ_G0020338.1 mouse_genomes_project 13 31187680 31201539 + MGP_LPJ_P0036584 Serpinb6b protein_coding protein_coding MGP_LPJ_T0036585.1 MGP_LPJ_G0020338.1 mouse_genomes_project 13 31187915 31201534 + MGP_LPJ_P0036585 Serpinb6b protein_coding nonsense_mediated_decay MGP_LPJ_T0036586.1 MGP_LPJ_G0020338.1 mouse_genomes_project 13 31187974 31201534 + Serpinb6b protein_coding processed_transcript MGP_LPJ_T0036429.1 MGP_LPJ_G0020273.1 mouse_genomes_project 13 21561454 21578809 + Slc17a2 protein_coding retained_intron MGP_LPJ_T0036430.1 MGP_LPJ_G0020273.1 mouse_genomes_project 13 21561488 21580593 + MGP_LPJ_P0036430 Slc17a2 protein_coding protein_coding MGP_LPJ_T0036431.1 MGP_LPJ_G0020273.1 mouse_genomes_project 13 21561506 21578580 + Slc17a2 protein_coding retained_intron MGP_LPJ_T0036432.1 MGP_LPJ_G0020273.1 mouse_genomes_project 13 21561509 21578161 + MGP_LPJ_P0036432 Slc17a2 protein_coding protein_coding MGP_LPJ_T0038096.1 MGP_LPJ_G0020855.1 mouse_genomes_project 13 117001478 117101980 - MGP_LPJ_P0038096 Ndufs4 protein_coding protein_coding MGP_LPJ_T0037562.1 MGP_LPJ_G0020692.1 mouse_genomes_project 13 82701493 82740110 + MGP_LPJ_P0037562 Mblac2 protein_coding protein_coding MGP_LPJ_T0036110.1 MGP_LPJ_G0020115.1 mouse_genomes_project 13 3268824 3302040 + MGP_LPJ_P0036110 Pitrm1 protein_coding unknown_likely_coding MGP_LPJ_T0036111.1 MGP_LPJ_G0020115.1 mouse_genomes_project 13 3268851 3302436 + MGP_LPJ_P0036111 Pitrm1 protein_coding protein_coding MGP_LPJ_T0036594.1 MGP_LPJ_G0020343.1 mouse_genomes_project 13 31499664 31515933 + MGP_LPJ_P0036594 protein_coding protein_coding MGP_LPJ_T0037948.1 MGP_LPJ_G0020804.1 mouse_genomes_project 13 106254690 106294490 - MGP_LPJ_P0037948 Trappc13 protein_coding protein_coding MGP_LPJ_T0037949.1 MGP_LPJ_G0020804.1 mouse_genomes_project 13 106254697 106294446 - MGP_LPJ_P0037949 Trappc13 protein_coding protein_coding MGP_LPJ_T0037950.1 MGP_LPJ_G0020804.1 mouse_genomes_project 13 106256886 106294444 - MGP_LPJ_P0037950 Trappc13 protein_coding protein_coding MGP_LPJ_T0037951.1 MGP_LPJ_G0020804.1 mouse_genomes_project 13 106257523 106294428 - MGP_LPJ_P0037951 Trappc13 protein_coding protein_coding MGP_LPJ_T0037952.1 MGP_LPJ_G0020804.1 mouse_genomes_project 13 106280953 106294480 - Trappc13 protein_coding retained_intron MGP_LPJ_T0037953.1 MGP_LPJ_G0020804.1 mouse_genomes_project 13 106289744 106294460 - Trappc13 protein_coding processed_transcript MGP_LPJ_T0037377.1 MGP_LPJ_G0020614.1 mouse_genomes_project 13 67725193 67763460 - MGP_LPJ_P0037377 Gm28041 protein_coding nonsense_mediated_decay MGP_LPJ_T0006666.1 MGP_LPJ_G0005520.1 mouse_genomes_project 13 122689820 122691328 + 1700074H08Rik lincRNA lincRNA MGP_LPJ_T0036758.1 MGP_LPJ_G0020409.1 mouse_genomes_project 13 42467102 42528632 + MGP_LPJ_P0036758 Rnf182 protein_coding protein_coding MGP_LPJ_T0036759.1 MGP_LPJ_G0020409.1 mouse_genomes_project 13 42467375 42525717 + MGP_LPJ_P0036759 Rnf182 protein_coding protein_coding MGP_LPJ_T0038147.1 MGP_LPJ_G0020878.1 mouse_genomes_project 13 122724473 122770038 - MGP_LPJ_P0038147 Nim1k protein_coding protein_coding MGP_LPJ_T0038148.1 MGP_LPJ_G0020878.1 mouse_genomes_project 13 122739057 122754050 - MGP_LPJ_P0038148 Nim1k protein_coding protein_coding MGP_LPJ_T0038056.1 MGP_LPJ_G0020834.1 mouse_genomes_project 13 114721822 114722529 + MGP_LPJ_P0038056 protein_coding protein_coding MGP_LPJ_T0002615.1 MGP_LPJ_G0002511.1 mouse_genomes_project 13 16588952 16589400 + MGP_LPJ_P0002615 Tcrg-V5 TR_V_gene TR_V_gene MGP_LPJ_T0002616.1 MGP_LPJ_G0002511.1 mouse_genomes_project 13 16589107 16589400 + MGP_LPJ_P0002616 Tcrg-V5 TR_V_gene TR_V_gene MGP_LPJ_T0036247.1 MGP_LPJ_G0020153.1 mouse_genomes_project 13 15235354 15288934 - MGP_LPJ_P0036247 Rala protein_coding protein_coding MGP_LPJ_T0037905.1 MGP_LPJ_G0020796.1 mouse_genomes_project 13 102795989 102828102 - MGP_LPJ_P0037905 Slc30a5 protein_coding protein_coding MGP_LPJ_T0012904.1 MGP_LPJ_G0010995.1 mouse_genomes_project 13 30044156 30046382 + processed_pseudogene processed_pseudogene MGP_LPJ_T0036340.1 MGP_LPJ_G0020203.1 mouse_genomes_project 13 19353249 19353679 - MGP_LPJ_P0036340 Hist1h4n protein_coding protein_coding MGP_LPJ_T0009961.1 MGP_LPJ_G0008079.1 mouse_genomes_project 13 63537386 63537460 + Mir23b miRNA miRNA MGP_LPJ_T0009982.1 MGP_LPJ_G0008100.1 mouse_genomes_project 13 115678305 115678396 + Mir449a miRNA miRNA MGP_LPJ_T0006631.1 MGP_LPJ_G0005494.1 mouse_genomes_project 13 95438965 95440991 - Gm26527 lincRNA lincRNA MGP_LPJ_T0037421.1 MGP_LPJ_G0020638.1 mouse_genomes_project 13 70271682 70313180 - MGP_LPJ_P0037421 Ube2ql1 protein_coding protein_coding MGP_LPJ_T0036303.1 MGP_LPJ_G0020176.1 mouse_genomes_project 13 18927080 18950299 - MGP_LPJ_P0036303 protein_coding protein_coding MGP_LPJ_T0036304.1 MGP_LPJ_G0020176.1 mouse_genomes_project 13 18927083 18950108 - MGP_LPJ_P0036304 protein_coding protein_coding MGP_LPJ_T0036305.1 MGP_LPJ_G0020176.1 mouse_genomes_project 13 18927655 18950442 - MGP_LPJ_P0036305 protein_coding protein_coding MGP_LPJ_T0036306.1 MGP_LPJ_G0020176.1 mouse_genomes_project 13 18927655 18950456 - MGP_LPJ_P0036306 protein_coding protein_coding MGP_LPJ_T0036307.1 MGP_LPJ_G0020176.1 mouse_genomes_project 13 18928997 18950108 - MGP_LPJ_P0036307 protein_coding protein_coding MGP_LPJ_T0101833.1 MGP_LPJ_G0039870.1 mouse_genomes_project 13 20464610 20465650 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0101834.1 MGP_LPJ_G0039871.1 mouse_genomes_project 13 20495911 20496202 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0037366.1 MGP_LPJ_G0020608.1 mouse_genomes_project 13 67578545 67593727 + MGP_LPJ_P0037366 protein_coding protein_coding MGP_LPJ_T0009939.1 MGP_LPJ_G0008057.1 mouse_genomes_project 13 21694646 21694775 - Gm44344 miRNA miRNA MGP_LPJ_T0037254.1 MGP_LPJ_G0020563.1 mouse_genomes_project 13 60969242 60972485 - MGP_LPJ_P0037254 Tpbpa protein_coding protein_coding MGP_LPJ_T0037256.1 MGP_LPJ_G0020565.1 mouse_genomes_project 13 61039196 61044630 - MGP_LPJ_P0037256 Ctsq protein_coding protein_coding MGP_LPJ_T0037257.1 MGP_LPJ_G0020565.1 mouse_genomes_project 13 61039206 61042339 - Ctsq protein_coding retained_intron MGP_LPJ_T0012945.1 MGP_LPJ_G0011036.1 mouse_genomes_project 13 99189031 99189906 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000930.1 MGP_LPJ_G0000858.1 mouse_genomes_project 13 102869479 102872896 + TEC TEC MGP_LPJ_T0006641.1 MGP_LPJ_G0005500.1 mouse_genomes_project 13 99482569 99499425 + lincRNA lincRNA MGP_LPJ_T0036320.1 MGP_LPJ_G0020185.1 mouse_genomes_project 13 19078237 19079181 - MGP_LPJ_P0036320 Olfr1535 protein_coding protein_coding MGP_LPJ_T0036222.1 MGP_LPJ_G0020142.1 mouse_genomes_project 13 11205295 11217912 - MGP_LPJ_P0036222 Ggps1 protein_coding protein_coding MGP_LPJ_T0037958.1 MGP_LPJ_G0020806.1 mouse_genomes_project 13 106321441 106346729 - MGP_LPJ_P0037958 Ppwd1 protein_coding protein_coding MGP_LPJ_T0099009.1 MGP_LPJ_G0037272.1 mouse_genomes_project 13 10415634 10415734 - Gm26133 snRNA snRNA MGP_LPJ_T0037194.1 MGP_LPJ_G0020544.1 mouse_genomes_project 13 58735277 58872852 + MGP_LPJ_P0037194 Ntrk2 protein_coding protein_coding MGP_LPJ_T0037195.1 MGP_LPJ_G0020544.1 mouse_genomes_project 13 58736581 59074297 + MGP_LPJ_P0037195 Ntrk2 protein_coding protein_coding MGP_LPJ_T0036342.1 MGP_LPJ_G0020205.1 mouse_genomes_project 13 19354492 19355557 - MGP_LPJ_P0036342 Hist1h2ao protein_coding protein_coding MGP_LPJ_T0037845.1 MGP_LPJ_G0020778.1 mouse_genomes_project 13 101228179 101299003 + MGP_LPJ_P0037845 Mrps27 protein_coding protein_coding MGP_LPJ_T0037383.1 MGP_LPJ_G0020619.1 mouse_genomes_project 13 67899550 67937839 - MGP_LPJ_P0037383 Gm26965 protein_coding nonsense_mediated_decay MGP_LPJ_T0006661.1 MGP_LPJ_G0005518.1 mouse_genomes_project 13 117329516 117424785 + 4930544M13Rik lincRNA lincRNA MGP_LPJ_T0006662.1 MGP_LPJ_G0005518.1 mouse_genomes_project 13 117329516 117380719 + 4930544M13Rik lincRNA lincRNA MGP_LPJ_T0036085.1 MGP_LPJ_G0020103.1 mouse_genomes_project 13 601913 634722 + MGP_LPJ_P0036085 Akr1c14 protein_coding protein_coding MGP_LPJ_T0036086.1 MGP_LPJ_G0020103.1 mouse_genomes_project 13 612510 634713 + MGP_LPJ_P0036086 Akr1c14 protein_coding protein_coding MGP_LPJ_T0036087.1 MGP_LPJ_G0020103.1 mouse_genomes_project 13 621829 633292 + Akr1c14 protein_coding processed_transcript MGP_LPJ_T0036312.1 MGP_LPJ_G0020180.1 mouse_genomes_project 13 18990343 18995776 - MGP_LPJ_P0036312 Gm10065 protein_coding protein_coding MGP_LPJ_T0037322.1 MGP_LPJ_G0020587.1 mouse_genomes_project 13 65059313 65221803 - MGP_LPJ_P0037322 Cntnap3 protein_coding protein_coding MGP_LPJ_T0000931.1 MGP_LPJ_G0000859.1 mouse_genomes_project 13 103457228 103457712 - TEC TEC MGP_LPJ_T0036523.1 MGP_LPJ_G0020307.1 mouse_genomes_project 13 25464156 25473402 - MGP_LPJ_P0036523 Prl8a1 protein_coding protein_coding MGP_LPJ_T0036524.1 MGP_LPJ_G0020307.1 mouse_genomes_project 13 25464666 25473402 - MGP_LPJ_P0036524 Prl8a1 protein_coding protein_coding MGP_LPJ_T0037831.1 MGP_LPJ_G0020772.1 mouse_genomes_project 13 100528202 100536802 - MGP_LPJ_P0037831 Tmem171 protein_coding protein_coding MGP_LPJ_T0037832.1 MGP_LPJ_G0020772.1 mouse_genomes_project 13 100534281 100536736 - MGP_LPJ_P0037832 Tmem171 protein_coding protein_coding MGP_LPJ_T0017309.1 MGP_LPJ_G0015176.1 mouse_genomes_project 13 114370842 114371414 + processed_transcript processed_transcript MGP_LPJ_T0036844.1 MGP_LPJ_G0020437.1 mouse_genomes_project 13 48375271 48384031 + MGP_LPJ_P0036844 Ninj1 protein_coding protein_coding MGP_LPJ_T0036845.1 MGP_LPJ_G0020437.1 mouse_genomes_project 13 48375311 48384031 + MGP_LPJ_P0036845 Ninj1 protein_coding protein_coding MGP_LPJ_T0036846.1 MGP_LPJ_G0020437.1 mouse_genomes_project 13 48375322 48383546 + MGP_LPJ_P0036846 Ninj1 protein_coding nonsense_mediated_decay MGP_LPJ_T0036847.1 MGP_LPJ_G0020437.1 mouse_genomes_project 13 48375553 48382711 + Ninj1 protein_coding processed_transcript MGP_LPJ_T0036848.1 MGP_LPJ_G0020437.1 mouse_genomes_project 13 48378082 48384031 + Ninj1 protein_coding processed_transcript MGP_LPJ_T0101858.1 MGP_LPJ_G0039895.1 mouse_genomes_project 13 32029718 32032770 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0012885.1 MGP_LPJ_G0010976.1 mouse_genomes_project 13 22939015 22939333 - processed_pseudogene processed_pseudogene MGP_LPJ_T0038153.1 MGP_LPJ_G0020882.1 mouse_genomes_project 13 122877699 122878919 + MGP_LPJ_P0038153 protein_coding protein_coding MGP_LPJ_T0038155.1 MGP_LPJ_G0020882.1 mouse_genomes_project 13 122878464 122878860 + MGP_LPJ_P0038155 protein_coding protein_coding MGP_LPJ_T0000923.1 MGP_LPJ_G0000851.1 mouse_genomes_project 13 91495864 91496683 + TEC TEC MGP_LPJ_T0012868.1 MGP_LPJ_G0010959.1 mouse_genomes_project 13 19405613 19406610 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017299.1 MGP_LPJ_G0015169.1 mouse_genomes_project 13 39666748 39717692 - A730081D07Rik processed_transcript processed_transcript MGP_LPJ_T0036760.1 MGP_LPJ_G0020410.1 mouse_genomes_project 13 42645677 42663767 + MGP_LPJ_P0036760 Cd83 protein_coding protein_coding MGP_LPJ_T0037494.1 MGP_LPJ_G0020669.1 mouse_genomes_project 13 75096041 75100469 - MGP_LPJ_P0037494 Lrrc14b protein_coding protein_coding MGP_LPJ_T0011376.1 MGP_LPJ_G0009494.1 mouse_genomes_project 13 100903560 100903809 - Gm24733 misc_RNA misc_RNA MGP_LPJ_T0037657.1 MGP_LPJ_G0020710.1 mouse_genomes_project 13 93210873 93222240 - Zcchc9 protein_coding retained_intron MGP_LPJ_T0037658.1 MGP_LPJ_G0020710.1 mouse_genomes_project 13 93211029 93220669 - MGP_LPJ_P0037658 Zcchc9 protein_coding protein_coding MGP_LPJ_T0037659.1 MGP_LPJ_G0020710.1 mouse_genomes_project 13 93213158 93222196 - Zcchc9 protein_coding retained_intron MGP_LPJ_T0037660.1 MGP_LPJ_G0020710.1 mouse_genomes_project 13 93214814 93215325 - Zcchc9 protein_coding retained_intron MGP_LPJ_T0006663.1 MGP_LPJ_G0005519.1 mouse_genomes_project 13 121494744 121530406 + 1700003P14Rik lincRNA lincRNA MGP_LPJ_T0006664.1 MGP_LPJ_G0005519.1 mouse_genomes_project 13 121495536 121530328 + 1700003P14Rik lincRNA lincRNA MGP_LPJ_T0006665.1 MGP_LPJ_G0005519.1 mouse_genomes_project 13 121495552 121530331 + 1700003P14Rik lincRNA lincRNA MGP_LPJ_T0012911.1 MGP_LPJ_G0011002.1 mouse_genomes_project 13 43328195 43329175 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012919.1 MGP_LPJ_G0011010.1 mouse_genomes_project 13 65245291 65246353 - processed_pseudogene processed_pseudogene MGP_LPJ_T0036522.1 MGP_LPJ_G0020306.1 mouse_genomes_project 13 25447990 25455740 - MGP_LPJ_P0036522 Prl8a9 protein_coding protein_coding MGP_LPJ_T0036290.1 MGP_LPJ_G0020171.1 mouse_genomes_project 13 18782712 18789010 - MGP_LPJ_P0036290 Gpx5 protein_coding protein_coding MGP_LPJ_T0036291.1 MGP_LPJ_G0020171.1 mouse_genomes_project 13 18782712 18788965 - MGP_LPJ_P0036291 Gpx5 protein_coding protein_coding MGP_LPJ_T0000935.1 MGP_LPJ_G0000863.1 mouse_genomes_project 13 114813307 114814582 + TEC TEC MGP_LPJ_T0003445.1 MGP_LPJ_G0003162.1 mouse_genomes_project 13 7125631 7462084 + antisense antisense MGP_LPJ_T0101260.1 MGP_LPJ_G0039501.1 mouse_genomes_project 13 22387604 22395387 - transcribed_processed_pseudogene retained_intron MGP_LPJ_T0101261.1 MGP_LPJ_G0039501.1 mouse_genomes_project 13 22388695 22389399 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0101262.1 MGP_LPJ_G0039501.1 mouse_genomes_project 13 22389139 22395217 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101263.1 MGP_LPJ_G0039501.1 mouse_genomes_project 13 22389236 22395158 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101864.1 MGP_LPJ_G0039901.1 mouse_genomes_project 13 41678334 41679223 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0037140.1 MGP_LPJ_G0020529.1 mouse_genomes_project 13 56353589 56359666 - MGP_LPJ_P0037140 Lect2 protein_coding protein_coding MGP_LPJ_T0101837.1 MGP_LPJ_G0039874.1 mouse_genomes_project 13 20578230 20579191 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0036270.1 MGP_LPJ_G0020160.1 mouse_genomes_project 13 17044675 17054554 + MGP_LPJ_P0036270 Sfrp4 protein_coding protein_coding MGP_LPJ_T0100277.1 MGP_LPJ_G0038540.1 mouse_genomes_project 13 46005396 46005525 + Gm24769 snoRNA snoRNA MGP_LPJ_T0099014.1 MGP_LPJ_G0037277.1 mouse_genomes_project 13 18320848 18320972 + Gm25605 snRNA snRNA MGP_LPJ_T0006602.1 MGP_LPJ_G0005474.1 mouse_genomes_project 13 56017412 56039072 - 4930550C17Rik lincRNA lincRNA MGP_LPJ_T0101860.1 MGP_LPJ_G0039897.1 mouse_genomes_project 13 32070936 32071753 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0037327.1 MGP_LPJ_G0020591.1 mouse_genomes_project 13 65357277 65408074 - MGP_LPJ_P0037327 Mfsd14b protein_coding protein_coding MGP_LPJ_T0037328.1 MGP_LPJ_G0020591.1 mouse_genomes_project 13 65357668 65408081 - MGP_LPJ_P0037328 Mfsd14b protein_coding protein_coding MGP_LPJ_T0037329.1 MGP_LPJ_G0020591.1 mouse_genomes_project 13 65359195 65362443 - Mfsd14b protein_coding retained_intron MGP_LPJ_T0036870.1 MGP_LPJ_G0020449.1 mouse_genomes_project 13 48885734 48933058 + MGP_LPJ_P0036870 Iars protein_coding protein_coding MGP_LPJ_T0036871.1 MGP_LPJ_G0020449.1 mouse_genomes_project 13 48885764 48933058 + MGP_LPJ_P0036871 Iars protein_coding protein_coding MGP_LPJ_T0036872.1 MGP_LPJ_G0020449.1 mouse_genomes_project 13 48885825 48891958 + MGP_LPJ_P0036872 Iars protein_coding protein_coding MGP_LPJ_T0036873.1 MGP_LPJ_G0020449.1 mouse_genomes_project 13 48891037 48932532 + MGP_LPJ_P0036873 Iars protein_coding protein_coding MGP_LPJ_T0036874.1 MGP_LPJ_G0020449.1 mouse_genomes_project 13 48904224 48910208 + MGP_LPJ_P0036874 Iars protein_coding nonsense_mediated_decay MGP_LPJ_T0036875.1 MGP_LPJ_G0020449.1 mouse_genomes_project 13 48904975 48914624 + Iars protein_coding retained_intron MGP_LPJ_T0036876.1 MGP_LPJ_G0020449.1 mouse_genomes_project 13 48906634 48913998 + Iars protein_coding retained_intron MGP_LPJ_T0036877.1 MGP_LPJ_G0020449.1 mouse_genomes_project 13 48916697 48922010 + Iars protein_coding retained_intron MGP_LPJ_T0036878.1 MGP_LPJ_G0020449.1 mouse_genomes_project 13 48920960 48921938 + Iars protein_coding retained_intron MGP_LPJ_T0012914.1 MGP_LPJ_G0011005.1 mouse_genomes_project 13 54542738 54542994 - processed_pseudogene processed_pseudogene MGP_LPJ_T0036713.1 MGP_LPJ_G0020389.1 mouse_genomes_project 13 39738359 39745363 + MGP_LPJ_P0036713 Tmem14c protein_coding protein_coding MGP_LPJ_T0038145.1 MGP_LPJ_G0020876.1 mouse_genomes_project 13 122641476 122678868 + MGP_LPJ_P0038145 Ccl28 protein_coding protein_coding MGP_LPJ_T0038097.1 MGP_LPJ_G0020856.1 mouse_genomes_project 13 117169818 117176277 - MGP_LPJ_P0038097 Fst protein_coding protein_coding MGP_LPJ_T0038098.1 MGP_LPJ_G0020856.1 mouse_genomes_project 13 117170979 117176133 - MGP_LPJ_P0038098 Fst protein_coding unknown_likely_coding MGP_LPJ_T0006644.1 MGP_LPJ_G0005503.1 mouse_genomes_project 13 100945596 100957664 - 2310020H05Rik lincRNA lincRNA MGP_LPJ_T0036311.1 MGP_LPJ_G0020179.1 mouse_genomes_project 13 18990153 19001809 + MGP_LPJ_P0036311 protein_coding protein_coding MGP_LPJ_T0037712.1 MGP_LPJ_G0020727.1 mouse_genomes_project 13 95096951 95109976 - MGP_LPJ_P0037712 protein_coding protein_coding MGP_LPJ_T0038149.1 MGP_LPJ_G0020879.1 mouse_genomes_project 13 122777486 122804225 - MGP_LPJ_P0038149 Zfp131 protein_coding protein_coding MGP_LPJ_T0038150.1 MGP_LPJ_G0020879.1 mouse_genomes_project 13 122778649 122805997 - MGP_LPJ_P0038150 Zfp131 protein_coding unknown_likely_coding MGP_LPJ_T0036535.1 MGP_LPJ_G0020316.1 mouse_genomes_project 13 26180119 26188900 + MGP_LPJ_P0036535 Prl5a1 protein_coding protein_coding MGP_LPJ_T0038071.1 MGP_LPJ_G0020839.1 mouse_genomes_project 13 115276897 115361044 + MGP_LPJ_P0038071 Slc38a9 protein_coding protein_coding MGP_LPJ_T0012861.1 MGP_LPJ_G0010952.1 mouse_genomes_project 13 14338376 14339334 + processed_pseudogene processed_pseudogene MGP_LPJ_T0036554.1 MGP_LPJ_G0020321.1 mouse_genomes_project 13 28444391 28455457 + Agtr1a protein_coding processed_transcript MGP_LPJ_T0036555.1 MGP_LPJ_G0020321.1 mouse_genomes_project 13 28444391 28488702 + MGP_LPJ_P0036555 Agtr1a protein_coding protein_coding MGP_LPJ_T0037543.1 MGP_LPJ_G0020689.1 mouse_genomes_project 13 82059130 82622963 - MGP_LPJ_P0037543 Adgrv1 protein_coding protein_coding MGP_LPJ_T0037544.1 MGP_LPJ_G0020689.1 mouse_genomes_project 13 82059130 82323399 - MGP_LPJ_P0037544 Adgrv1 protein_coding protein_coding MGP_LPJ_T0037545.1 MGP_LPJ_G0020689.1 mouse_genomes_project 13 82059131 82430578 - MGP_LPJ_P0037545 Adgrv1 protein_coding nonsense_mediated_decay MGP_LPJ_T0037546.1 MGP_LPJ_G0020689.1 mouse_genomes_project 13 82070996 82322920 - Adgrv1 protein_coding processed_transcript MGP_LPJ_T0037547.1 MGP_LPJ_G0020689.1 mouse_genomes_project 13 82493615 82564014 - MGP_LPJ_P0037547 Adgrv1 protein_coding protein_coding MGP_LPJ_T0037548.1 MGP_LPJ_G0020689.1 mouse_genomes_project 13 82493616 82578271 - Adgrv1 protein_coding retained_intron MGP_LPJ_T0037549.1 MGP_LPJ_G0020689.1 mouse_genomes_project 13 82493616 82521723 - Adgrv1 protein_coding retained_intron MGP_LPJ_T0037550.1 MGP_LPJ_G0020689.1 mouse_genomes_project 13 82530011 82533109 - Adgrv1 protein_coding retained_intron MGP_LPJ_T0037551.1 MGP_LPJ_G0020689.1 mouse_genomes_project 13 82545860 82548176 - Adgrv1 protein_coding retained_intron MGP_LPJ_T0037552.1 MGP_LPJ_G0020689.1 mouse_genomes_project 13 82549635 82622948 - MGP_LPJ_P0037552 Adgrv1 protein_coding protein_coding MGP_LPJ_T0037553.1 MGP_LPJ_G0020689.1 mouse_genomes_project 13 82570799 82622948 - MGP_LPJ_P0037553 Adgrv1 protein_coding protein_coding MGP_LPJ_T0037554.1 MGP_LPJ_G0020689.1 mouse_genomes_project 13 82572414 82622950 - MGP_LPJ_P0037554 Adgrv1 protein_coding protein_coding MGP_LPJ_T0037555.1 MGP_LPJ_G0020689.1 mouse_genomes_project 13 82574714 82577496 - Adgrv1 protein_coding retained_intron MGP_LPJ_T0101856.1 MGP_LPJ_G0039893.1 mouse_genomes_project 13 31877565 31880694 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0003454.1 MGP_LPJ_G0003170.1 mouse_genomes_project 13 21548970 21559062 - Gm11337 antisense antisense MGP_LPJ_T0012947.1 MGP_LPJ_G0011038.1 mouse_genomes_project 13 102737577 102737886 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100267.1 MGP_LPJ_G0038530.1 mouse_genomes_project 13 16338661 16338795 + Gm26172 snoRNA snoRNA MGP_LPJ_T0036208.1 MGP_LPJ_G0020140.1 mouse_genomes_project 13 11113160 11114534 - MGP_LPJ_P0036208 Gm18856 protein_coding protein_coding MGP_LPJ_T0036865.1 MGP_LPJ_G0020445.1 mouse_genomes_project 13 48743417 48769432 + MGP_LPJ_P0036865 Aspn protein_coding protein_coding MGP_LPJ_T0036866.1 MGP_LPJ_G0020445.1 mouse_genomes_project 13 48743417 48769432 + MGP_LPJ_P0036866 Aspn protein_coding protein_coding MGP_LPJ_T0099029.1 MGP_LPJ_G0037292.1 mouse_genomes_project 13 44418597 44418704 - Gm23387 snRNA snRNA MGP_LPJ_T0037683.1 MGP_LPJ_G0020715.1 mouse_genomes_project 13 93773355 93807760 + MGP_LPJ_P0037683 Dhfr protein_coding protein_coding MGP_LPJ_T0003510.1 MGP_LPJ_G0003202.1 mouse_genomes_project 13 93835458 93847646 - C030017D09Rik antisense antisense MGP_LPJ_T0036109.1 MGP_LPJ_G0020114.1 mouse_genomes_project 13 3110507 3112997 + MGP_LPJ_P0036109 protein_coding protein_coding MGP_LPJ_T0006587.1 MGP_LPJ_G0005467.1 mouse_genomes_project 13 52998615 53002908 + Gm2762 lincRNA lincRNA MGP_LPJ_T0006588.1 MGP_LPJ_G0005467.1 mouse_genomes_project 13 52998631 53059445 + Gm2762 lincRNA lincRNA MGP_LPJ_T0006589.1 MGP_LPJ_G0005467.1 mouse_genomes_project 13 52998647 53062039 + Gm2762 lincRNA lincRNA MGP_LPJ_T0006590.1 MGP_LPJ_G0005467.1 mouse_genomes_project 13 52999055 53000297 + Gm2762 lincRNA lincRNA MGP_LPJ_T0006591.1 MGP_LPJ_G0005467.1 mouse_genomes_project 13 52999249 53008433 + Gm2762 lincRNA lincRNA MGP_LPJ_T0006592.1 MGP_LPJ_G0005467.1 mouse_genomes_project 13 52999249 53003982 + Gm2762 lincRNA lincRNA MGP_LPJ_T0006593.1 MGP_LPJ_G0005467.1 mouse_genomes_project 13 53000293 53003998 + Gm2762 lincRNA lincRNA MGP_LPJ_T0006594.1 MGP_LPJ_G0005467.1 mouse_genomes_project 13 53006247 53008914 + Gm2762 lincRNA lincRNA MGP_LPJ_T0000915.1 MGP_LPJ_G0000843.1 mouse_genomes_project 13 51547034 51549198 - TEC TEC MGP_LPJ_T0038109.1 MGP_LPJ_G0020859.1 mouse_genomes_project 13 117696762 117849677 - MGP_LPJ_P0038109 Itga1 protein_coding protein_coding MGP_LPJ_T0098156.1 MGP_LPJ_G0036437.1 mouse_genomes_project 13 98590736 98590851 + Gm27792 rRNA rRNA MGP_LPJ_T0003521.1 MGP_LPJ_G0003208.1 mouse_genomes_project 13 104836435 104838081 + 1700099I09Rik antisense antisense MGP_LPJ_T0003522.1 MGP_LPJ_G0003208.1 mouse_genomes_project 13 104836450 104838047 + 1700099I09Rik antisense antisense MGP_LPJ_T0037730.1 MGP_LPJ_G0020736.1 mouse_genomes_project 13 95872352 96093349 + MGP_LPJ_P0037730 Ap3b1 protein_coding protein_coding MGP_LPJ_T0037731.1 MGP_LPJ_G0020736.1 mouse_genomes_project 13 95872496 96092791 + MGP_LPJ_P0037731 Ap3b1 protein_coding unknown_likely_coding MGP_LPJ_T0101842.1 MGP_LPJ_G0039879.1 mouse_genomes_project 13 20742496 20742974 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0037769.1 MGP_LPJ_G0020751.1 mouse_genomes_project 13 98058054 98085392 + MGP_LPJ_P0037769 Poc5 protein_coding protein_coding MGP_LPJ_T0036152.1 MGP_LPJ_G0020123.1 mouse_genomes_project 13 5701955 5726098 - MGP_LPJ_P0036152 Gtpbp4 protein_coding protein_coding MGP_LPJ_T0006530.1 MGP_LPJ_G0005425.1 mouse_genomes_project 13 21000395 21045168 - lincRNA lincRNA MGP_LPJ_T0003489.1 MGP_LPJ_G0003193.1 mouse_genomes_project 13 68268355 68322519 - antisense antisense MGP_LPJ_T0003490.1 MGP_LPJ_G0003194.1 mouse_genomes_project 13 70093386 70094348 - A530095I07Rik antisense antisense MGP_LPJ_T0000918.1 MGP_LPJ_G0000846.1 mouse_genomes_project 13 69559030 69560600 + TEC TEC MGP_LPJ_T0097986.1 MGP_LPJ_G0036267.1 mouse_genomes_project 13 26878679 26878919 + pseudogene pseudogene MGP_LPJ_T0036566.1 MGP_LPJ_G0020328.1 mouse_genomes_project 13 29702131 29705331 - MGP_LPJ_P0036566 A530084C06Rik protein_coding protein_coding MGP_LPJ_T0037661.1 MGP_LPJ_G0020711.1 mouse_genomes_project 13 93263788 93288142 - MGP_LPJ_P0037661 Ckmt2 protein_coding protein_coding MGP_LPJ_T0036896.1 MGP_LPJ_G0020455.1 mouse_genomes_project 13 50553141 50607499 + MGP_LPJ_P0036896 Spin1 protein_coding protein_coding MGP_LPJ_T0000906.1 MGP_LPJ_G0000835.1 mouse_genomes_project 13 15365168 15371146 + TEC TEC MGP_LPJ_T0037216.1 MGP_LPJ_G0020546.1 mouse_genomes_project 13 59553763 59568317 + MGP_LPJ_P0037216 Naa35 protein_coding protein_coding MGP_LPJ_T0037217.1 MGP_LPJ_G0020546.1 mouse_genomes_project 13 59553799 59603866 + MGP_LPJ_P0037217 Naa35 protein_coding protein_coding MGP_LPJ_T0037218.1 MGP_LPJ_G0020546.1 mouse_genomes_project 13 59553898 59577287 + MGP_LPJ_P0037218 Naa35 protein_coding protein_coding MGP_LPJ_T0037219.1 MGP_LPJ_G0020546.1 mouse_genomes_project 13 59554674 59593574 + MGP_LPJ_P0037219 Naa35 protein_coding protein_coding MGP_LPJ_T0037220.1 MGP_LPJ_G0020546.1 mouse_genomes_project 13 59563873 59568790 + Naa35 protein_coding retained_intron MGP_LPJ_T0037221.1 MGP_LPJ_G0020546.1 mouse_genomes_project 13 59566642 59585966 + MGP_LPJ_P0037221 Naa35 protein_coding nonsense_mediated_decay MGP_LPJ_T0037222.1 MGP_LPJ_G0020546.1 mouse_genomes_project 13 59577717 59596690 + Naa35 protein_coding retained_intron MGP_LPJ_T0037223.1 MGP_LPJ_G0020546.1 mouse_genomes_project 13 59577840 59594505 + Naa35 protein_coding retained_intron MGP_LPJ_T0037224.1 MGP_LPJ_G0020546.1 mouse_genomes_project 13 59577875 59594531 + Naa35 protein_coding retained_intron MGP_LPJ_T0037225.1 MGP_LPJ_G0020546.1 mouse_genomes_project 13 59577960 59593646 + MGP_LPJ_P0037225 Naa35 protein_coding protein_coding MGP_LPJ_T0037226.1 MGP_LPJ_G0020546.1 mouse_genomes_project 13 59585932 59603826 + Naa35 protein_coding processed_transcript MGP_LPJ_T0037227.1 MGP_LPJ_G0020546.1 mouse_genomes_project 13 59585982 59594721 + Naa35 protein_coding retained_intron MGP_LPJ_T0037228.1 MGP_LPJ_G0020546.1 mouse_genomes_project 13 59585983 59597003 + MGP_LPJ_P0037228 Naa35 protein_coding protein_coding MGP_LPJ_T0037229.1 MGP_LPJ_G0020546.1 mouse_genomes_project 13 59593500 59597994 + Naa35 protein_coding retained_intron MGP_LPJ_T0037230.1 MGP_LPJ_G0020546.1 mouse_genomes_project 13 59601798 59603713 + Naa35 protein_coding retained_intron MGP_LPJ_T0036294.1 MGP_LPJ_G0020173.1 mouse_genomes_project 13 18839311 18840366 + MGP_LPJ_P0036294 Olfr1367 protein_coding protein_coding MGP_LPJ_T0012907.1 MGP_LPJ_G0010998.1 mouse_genomes_project 13 32338680 32340046 - processed_pseudogene processed_pseudogene MGP_LPJ_T0036244.1 MGP_LPJ_G0020150.1 mouse_genomes_project 13 14135152 15028608 - MGP_LPJ_P0036244 Sugct protein_coding protein_coding MGP_LPJ_T0036182.1 MGP_LPJ_G0020127.1 mouse_genomes_project 13 6632562 7127000 - MGP_LPJ_P0036182 Chrm3 protein_coding protein_coding MGP_LPJ_T0036183.1 MGP_LPJ_G0020127.1 mouse_genomes_project 13 6634313 6636083 - MGP_LPJ_P0036183 Chrm3 protein_coding protein_coding MGP_LPJ_T0036184.1 MGP_LPJ_G0020127.1 mouse_genomes_project 13 6976314 7126716 - Chrm3 protein_coding processed_transcript MGP_LPJ_T0006606.1 MGP_LPJ_G0005477.1 mouse_genomes_project 13 63526449 63534034 - Gm16907 lincRNA lincRNA MGP_LPJ_T0011374.1 MGP_LPJ_G0009492.1 mouse_genomes_project 13 56523615 56523785 + Gm27271 misc_RNA misc_RNA MGP_LPJ_T0036108.1 MGP_LPJ_G0020113.1 mouse_genomes_project 13 2498634 2507533 + MGP_LPJ_P0036108 Klf6 protein_coding protein_coding MGP_LPJ_T0036976.1 MGP_LPJ_G0020480.1 mouse_genomes_project 13 54265386 54271290 - MGP_LPJ_P0036976 Nop16 protein_coding protein_coding MGP_LPJ_T0036977.1 MGP_LPJ_G0020480.1 mouse_genomes_project 13 54265737 54271258 - MGP_LPJ_P0036977 Nop16 protein_coding protein_coding MGP_LPJ_T0036978.1 MGP_LPJ_G0020480.1 mouse_genomes_project 13 54266440 54271176 - MGP_LPJ_P0036978 Nop16 protein_coding nonsense_mediated_decay MGP_LPJ_T0037136.1 MGP_LPJ_G0020528.1 mouse_genomes_project 13 56329976 56334966 + MGP_LPJ_P0037136 Fbxl21 protein_coding protein_coding MGP_LPJ_T0037137.1 MGP_LPJ_G0020528.1 mouse_genomes_project 13 56329995 56345457 + MGP_LPJ_P0037137 Fbxl21 protein_coding protein_coding MGP_LPJ_T0037138.1 MGP_LPJ_G0020528.1 mouse_genomes_project 13 56330012 56345345 + MGP_LPJ_P0037138 Fbxl21 protein_coding protein_coding MGP_LPJ_T0037139.1 MGP_LPJ_G0020528.1 mouse_genomes_project 13 56330017 56337596 + MGP_LPJ_P0037139 Fbxl21 protein_coding nonsense_mediated_decay MGP_LPJ_T0099021.1 MGP_LPJ_G0037284.1 mouse_genomes_project 13 30961946 30962055 + Gm27342 snRNA snRNA MGP_LPJ_T0012908.1 MGP_LPJ_G0010999.1 mouse_genomes_project 13 33326531 33327517 + processed_pseudogene processed_pseudogene MGP_LPJ_T0036501.1 MGP_LPJ_G0020294.1 mouse_genomes_project 13 24905749 24913144 + MGP_LPJ_P0036501 Prl protein_coding protein_coding MGP_LPJ_T0037848.1 MGP_LPJ_G0020781.1 mouse_genomes_project 13 101857118 101930392 - MGP_LPJ_P0037848 Mccc2 protein_coding protein_coding MGP_LPJ_T0037798.1 MGP_LPJ_G0020761.1 mouse_genomes_project 13 98844319 98885753 + MGP_LPJ_P0037798 Gfm2 protein_coding protein_coding MGP_LPJ_T0037799.1 MGP_LPJ_G0020761.1 mouse_genomes_project 13 98844319 98862009 + MGP_LPJ_P0037799 Gfm2 protein_coding protein_coding MGP_LPJ_T0037800.1 MGP_LPJ_G0020761.1 mouse_genomes_project 13 98844359 98883945 + Gfm2 protein_coding retained_intron MGP_LPJ_T0037801.1 MGP_LPJ_G0020761.1 mouse_genomes_project 13 98844360 98885763 + MGP_LPJ_P0037801 Gfm2 protein_coding protein_coding MGP_LPJ_T0037802.1 MGP_LPJ_G0020761.1 mouse_genomes_project 13 98844367 98877999 + MGP_LPJ_P0037802 Gfm2 protein_coding protein_coding MGP_LPJ_T0037803.1 MGP_LPJ_G0020761.1 mouse_genomes_project 13 98844380 98850865 + Gfm2 protein_coding retained_intron MGP_LPJ_T0037804.1 MGP_LPJ_G0020761.1 mouse_genomes_project 13 98844384 98890507 + MGP_LPJ_P0037804 Gfm2 protein_coding protein_coding MGP_LPJ_T0037805.1 MGP_LPJ_G0020761.1 mouse_genomes_project 13 98844390 98852836 + MGP_LPJ_P0037805 Gfm2 protein_coding protein_coding MGP_LPJ_T0037806.1 MGP_LPJ_G0020761.1 mouse_genomes_project 13 98844422 98885763 + MGP_LPJ_P0037806 Gfm2 protein_coding protein_coding MGP_LPJ_T0037807.1 MGP_LPJ_G0020761.1 mouse_genomes_project 13 98856880 98872615 + MGP_LPJ_P0037807 Gfm2 protein_coding nonsense_mediated_decay MGP_LPJ_T0037808.1 MGP_LPJ_G0020761.1 mouse_genomes_project 13 98868823 98885763 + Gfm2 protein_coding retained_intron MGP_LPJ_T0037809.1 MGP_LPJ_G0020761.1 mouse_genomes_project 13 98880760 98886798 + Gfm2 protein_coding retained_intron MGP_LPJ_T0038108.1 MGP_LPJ_G0020858.1 mouse_genomes_project 13 117569061 117670814 - MGP_LPJ_P0038108 Itga2 protein_coding protein_coding MGP_LPJ_T0036308.1 MGP_LPJ_G0020177.1 mouse_genomes_project 13 18951570 18964076 - MGP_LPJ_P0036308 Zscan26 protein_coding protein_coding MGP_LPJ_T0036309.1 MGP_LPJ_G0020177.1 mouse_genomes_project 13 18953916 18964079 - MGP_LPJ_P0036309 Zscan26 protein_coding protein_coding MGP_LPJ_T0036898.1 MGP_LPJ_G0020457.1 mouse_genomes_project 13 50877709 50891849 + MGP_LPJ_P0036898 S1pr3 protein_coding protein_coding MGP_LPJ_T0037811.1 MGP_LPJ_G0020763.1 mouse_genomes_project 13 98952715 98964663 + MGP_LPJ_P0037811 Enc1 protein_coding protein_coding MGP_LPJ_T0036924.1 MGP_LPJ_G0020465.1 mouse_genomes_project 13 52136605 52206618 + MGP_LPJ_P0036924 Syk protein_coding protein_coding MGP_LPJ_T0036925.1 MGP_LPJ_G0020465.1 mouse_genomes_project 13 52136869 52201442 + MGP_LPJ_P0036925 Syk protein_coding protein_coding MGP_LPJ_T0036926.1 MGP_LPJ_G0020465.1 mouse_genomes_project 13 52136935 52168549 + Syk protein_coding retained_intron MGP_LPJ_T0036927.1 MGP_LPJ_G0020465.1 mouse_genomes_project 13 52151738 52206608 + MGP_LPJ_P0036927 Syk protein_coding protein_coding MGP_LPJ_T0036928.1 MGP_LPJ_G0020465.1 mouse_genomes_project 13 52151844 52179610 + Syk protein_coding retained_intron MGP_LPJ_T0099027.1 MGP_LPJ_G0037290.1 mouse_genomes_project 13 42739235 42739343 + Gm23117 snRNA snRNA MGP_LPJ_T0002511.1 MGP_LPJ_G0002417.1 mouse_genomes_project 13 16664838 16666559 + MGP_LPJ_P0002511 TR_C_gene TR_C_gene MGP_LPJ_T0098155.1 MGP_LPJ_G0036436.1 mouse_genomes_project 13 52540087 52540199 - n-R5s54 rRNA rRNA MGP_LPJ_T0038000.1 MGP_LPJ_G0020823.1 mouse_genomes_project 13 110518901 110556600 + MGP_LPJ_P0038000 Ercc8 protein_coding nonsense_mediated_decay MGP_LPJ_T0038001.1 MGP_LPJ_G0020823.1 mouse_genomes_project 13 110518908 110524078 + Ercc8 protein_coding retained_intron MGP_LPJ_T0038002.1 MGP_LPJ_G0020823.1 mouse_genomes_project 13 110518908 110535007 + MGP_LPJ_P0038002 Ercc8 protein_coding protein_coding MGP_LPJ_T0038003.1 MGP_LPJ_G0020823.1 mouse_genomes_project 13 110518908 110537763 + MGP_LPJ_P0038003 Ercc8 protein_coding nonsense_mediated_decay MGP_LPJ_T0038004.1 MGP_LPJ_G0020823.1 mouse_genomes_project 13 110518908 110556217 + MGP_LPJ_P0038004 Ercc8 protein_coding protein_coding MGP_LPJ_T0038005.1 MGP_LPJ_G0020823.1 mouse_genomes_project 13 110518924 110556217 + MGP_LPJ_P0038005 Ercc8 protein_coding nonsense_mediated_decay MGP_LPJ_T0038006.1 MGP_LPJ_G0020823.1 mouse_genomes_project 13 110518941 110556209 + MGP_LPJ_P0038006 Ercc8 protein_coding nonsense_mediated_decay MGP_LPJ_T0038007.1 MGP_LPJ_G0020823.1 mouse_genomes_project 13 110518945 110533512 + MGP_LPJ_P0038007 Ercc8 protein_coding nonsense_mediated_decay MGP_LPJ_T0038008.1 MGP_LPJ_G0020823.1 mouse_genomes_project 13 110518973 110544400 + MGP_LPJ_P0038008 Ercc8 protein_coding nonsense_mediated_decay MGP_LPJ_T0038009.1 MGP_LPJ_G0020823.1 mouse_genomes_project 13 110518974 110539179 + MGP_LPJ_P0038009 Ercc8 protein_coding nonsense_mediated_decay MGP_LPJ_T0036908.1 MGP_LPJ_G0020462.1 mouse_genomes_project 13 51198178 51313464 - MGP_LPJ_P0036908 Sema4d protein_coding protein_coding MGP_LPJ_T0036909.1 MGP_LPJ_G0020462.1 mouse_genomes_project 13 51198178 51313538 - MGP_LPJ_P0036909 Sema4d protein_coding protein_coding MGP_LPJ_T0036910.1 MGP_LPJ_G0020462.1 mouse_genomes_project 13 51198182 51245907 - MGP_LPJ_P0036910 Sema4d protein_coding protein_coding MGP_LPJ_T0036911.1 MGP_LPJ_G0020462.1 mouse_genomes_project 13 51209120 51211807 - Sema4d protein_coding retained_intron MGP_LPJ_T0036912.1 MGP_LPJ_G0020462.1 mouse_genomes_project 13 51224696 51261748 - Sema4d protein_coding processed_transcript MGP_LPJ_T0036913.1 MGP_LPJ_G0020462.1 mouse_genomes_project 13 51224696 51261644 - Sema4d protein_coding processed_transcript MGP_LPJ_T0036914.1 MGP_LPJ_G0020462.1 mouse_genomes_project 13 51227864 51266285 - Sema4d protein_coding processed_transcript MGP_LPJ_T0036915.1 MGP_LPJ_G0020462.1 mouse_genomes_project 13 51227911 51268885 - Sema4d protein_coding processed_transcript MGP_LPJ_T0036916.1 MGP_LPJ_G0020462.1 mouse_genomes_project 13 51227931 51270922 - Sema4d protein_coding processed_transcript MGP_LPJ_T0036917.1 MGP_LPJ_G0020462.1 mouse_genomes_project 13 51227954 51270788 - Sema4d protein_coding processed_transcript MGP_LPJ_T0036918.1 MGP_LPJ_G0020462.1 mouse_genomes_project 13 51227981 51261555 - Sema4d protein_coding processed_transcript MGP_LPJ_T0036919.1 MGP_LPJ_G0020462.1 mouse_genomes_project 13 51228030 51294376 - Sema4d protein_coding processed_transcript MGP_LPJ_T0036920.1 MGP_LPJ_G0020462.1 mouse_genomes_project 13 51228063 51313455 - Sema4d protein_coding processed_transcript MGP_LPJ_T0099012.1 MGP_LPJ_G0037275.1 mouse_genomes_project 13 14498075 14498182 + Gm25020 snRNA snRNA MGP_LPJ_T0036947.1 MGP_LPJ_G0020470.1 mouse_genomes_project 13 53073830 53079972 - MGP_LPJ_P0036947 Msx2 protein_coding protein_coding MGP_LPJ_T0036948.1 MGP_LPJ_G0020470.1 mouse_genomes_project 13 53078403 53079972 - Msx2 protein_coding retained_intron MGP_LPJ_T0006584.1 MGP_LPJ_G0005464.1 mouse_genomes_project 13 47671927 47674227 - 6720427I07Rik lincRNA lincRNA MGP_LPJ_T0009969.1 MGP_LPJ_G0008087.1 mouse_genomes_project 13 85295371 85295621 + miRNA miRNA MGP_LPJ_T0036829.1 MGP_LPJ_G0020432.1 mouse_genomes_project 13 47730375 47768838 - MGP_LPJ_P0036829 protein_coding unknown_likely_coding MGP_LPJ_T0099041.1 MGP_LPJ_G0037304.1 mouse_genomes_project 13 109033206 109033313 - Gm24527 snRNA snRNA MGP_LPJ_T0036372.1 MGP_LPJ_G0020226.1 mouse_genomes_project 13 19953308 19994252 + MGP_LPJ_P0036372 Vmn1r203 protein_coding protein_coding MGP_LPJ_T0038037.1 MGP_LPJ_G0020827.1 mouse_genomes_project 13 112526689 112757068 - MGP_LPJ_P0038037 Rab3c protein_coding protein_coding MGP_LPJ_T0036753.1 MGP_LPJ_G0020404.1 mouse_genomes_project 13 42027406 42133554 - MGP_LPJ_P0036753 Gfod1 protein_coding protein_coding MGP_LPJ_T0036597.1 MGP_LPJ_G0020346.1 mouse_genomes_project 13 31505387 31516613 + MGP_LPJ_P0036597 protein_coding protein_coding MGP_LPJ_T0036515.1 MGP_LPJ_G0020303.1 mouse_genomes_project 13 25257741 25278906 - MGP_LPJ_P0036515 Prl2b1 protein_coding protein_coding MGP_LPJ_T0036516.1 MGP_LPJ_G0020303.1 mouse_genomes_project 13 25257741 25278906 - MGP_LPJ_P0036516 Prl2b1 protein_coding protein_coding MGP_LPJ_T0036310.1 MGP_LPJ_G0020178.1 mouse_genomes_project 13 18978780 18980243 - MGP_LPJ_P0036310 Nkapl protein_coding protein_coding MGP_LPJ_T0037529.1 MGP_LPJ_G0020684.1 mouse_genomes_project 13 77966249 78441107 + MGP_LPJ_P0037529 2210408I21Rik protein_coding protein_coding MGP_LPJ_T0011370.1 MGP_LPJ_G0009488.1 mouse_genomes_project 13 54098089 54098349 - Gm22668 misc_RNA misc_RNA MGP_LPJ_T0037849.1 MGP_LPJ_G0020782.1 mouse_genomes_project 13 101932747 102019337 - MGP_LPJ_P0037849 Bdp1 protein_coding protein_coding MGP_LPJ_T0037850.1 MGP_LPJ_G0020782.1 mouse_genomes_project 13 101932749 101970916 - MGP_LPJ_P0037850 Bdp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0037851.1 MGP_LPJ_G0020782.1 mouse_genomes_project 13 101938054 102019105 - MGP_LPJ_P0037851 Bdp1 protein_coding protein_coding MGP_LPJ_T0037852.1 MGP_LPJ_G0020782.1 mouse_genomes_project 13 101958077 101961529 - Bdp1 protein_coding retained_intron MGP_LPJ_T0037853.1 MGP_LPJ_G0020782.1 mouse_genomes_project 13 101976095 101981143 - Bdp1 protein_coding retained_intron MGP_LPJ_T0037854.1 MGP_LPJ_G0020782.1 mouse_genomes_project 13 101993929 102013768 - MGP_LPJ_P0037854 Bdp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0037855.1 MGP_LPJ_G0020782.1 mouse_genomes_project 13 102012729 102019144 - MGP_LPJ_P0037855 Bdp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0036083.1 MGP_LPJ_G0020101.1 mouse_genomes_project 13 490142 500690 + MGP_LPJ_P0036083 Tubal3 protein_coding protein_coding MGP_LPJ_T0036725.1 MGP_LPJ_G0020396.1 mouse_genomes_project 13 40040758 40094035 - MGP_LPJ_P0036725 Nedd9 protein_coding protein_coding MGP_LPJ_T0036726.1 MGP_LPJ_G0020396.1 mouse_genomes_project 13 40040758 40230365 - MGP_LPJ_P0036726 Nedd9 protein_coding protein_coding MGP_LPJ_T0012869.1 MGP_LPJ_G0010960.1 mouse_genomes_project 13 19432992 19434654 + processed_pseudogene processed_pseudogene MGP_LPJ_T0036367.1 MGP_LPJ_G0020221.1 mouse_genomes_project 13 19856425 19857331 + MGP_LPJ_P0036367 Vmn1r196 protein_coding protein_coding MGP_LPJ_T0036082.1 MGP_LPJ_G0020100.1 mouse_genomes_project 13 443060 483649 - MGP_LPJ_P0036082 Net1 protein_coding protein_coding MGP_LPJ_T0036868.1 MGP_LPJ_G0020447.1 mouse_genomes_project 13 48807755 48824185 + MGP_LPJ_P0036868 Ogn protein_coding protein_coding MGP_LPJ_T0037713.1 MGP_LPJ_G0020728.1 mouse_genomes_project 13 95096951 95121750 - MGP_LPJ_P0037713 protein_coding protein_coding MGP_LPJ_T0037714.1 MGP_LPJ_G0020728.1 mouse_genomes_project 13 95104483 95121355 - protein_coding retained_intron MGP_LPJ_T0036238.1 MGP_LPJ_G0020148.1 mouse_genomes_project 13 12683902 12947889 + MGP_LPJ_P0036238 Gli3 protein_coding protein_coding MGP_LPJ_T0036239.1 MGP_LPJ_G0020148.1 mouse_genomes_project 13 12683918 12868012 + Gli3 protein_coding processed_transcript MGP_LPJ_T0036240.1 MGP_LPJ_G0020148.1 mouse_genomes_project 13 12684390 12891708 + Gli3 protein_coding retained_intron MGP_LPJ_T0036241.1 MGP_LPJ_G0020148.1 mouse_genomes_project 13 12684647 12964379 + MGP_LPJ_P0036241 Gli3 protein_coding protein_coding MGP_LPJ_T0037403.1 MGP_LPJ_G0020629.1 mouse_genomes_project 13 68326811 68334944 + MGP_LPJ_P0037403 Gm10037 protein_coding protein_coding MGP_LPJ_T0012875.1 MGP_LPJ_G0010966.1 mouse_genomes_project 13 20216160 20217470 + processed_pseudogene processed_pseudogene MGP_LPJ_T0036506.1 MGP_LPJ_G0020298.1 mouse_genomes_project 13 25080130 25088760 + MGP_LPJ_P0036506 Prl3c1 protein_coding protein_coding MGP_LPJ_T0036507.1 MGP_LPJ_G0020298.1 mouse_genomes_project 13 25083913 25088760 + MGP_LPJ_P0036507 Prl3c1 protein_coding protein_coding MGP_LPJ_T0036508.1 MGP_LPJ_G0020298.1 mouse_genomes_project 13 25084363 25088623 + MGP_LPJ_P0036508 Prl3c1 protein_coding protein_coding MGP_LPJ_T0003470.1 MGP_LPJ_G0003183.1 mouse_genomes_project 13 49744073 49905670 - antisense antisense MGP_LPJ_T0037135.1 MGP_LPJ_G0020527.1 mouse_genomes_project 13 56288772 56291746 - MGP_LPJ_P0037135 Il9 protein_coding protein_coding MGP_LPJ_T0036761.1 MGP_LPJ_G0020411.1 mouse_genomes_project 13 43635357 43637462 + Jarid2 protein_coding processed_transcript MGP_LPJ_T0036762.1 MGP_LPJ_G0020411.1 mouse_genomes_project 13 43635418 43761159 + MGP_LPJ_P0036762 Jarid2 protein_coding protein_coding MGP_LPJ_T0036763.1 MGP_LPJ_G0020411.1 mouse_genomes_project 13 43635678 43736251 + MGP_LPJ_P0036763 Jarid2 protein_coding protein_coding MGP_LPJ_T0036764.1 MGP_LPJ_G0020411.1 mouse_genomes_project 13 43636657 43836295 + MGP_LPJ_P0036764 Jarid2 protein_coding protein_coding MGP_LPJ_T0036765.1 MGP_LPJ_G0020411.1 mouse_genomes_project 13 43636706 43837183 + MGP_LPJ_P0036765 Jarid2 protein_coding protein_coding MGP_LPJ_T0036766.1 MGP_LPJ_G0020411.1 mouse_genomes_project 13 43636721 43816988 + MGP_LPJ_P0036766 Jarid2 protein_coding protein_coding MGP_LPJ_T0036767.1 MGP_LPJ_G0020411.1 mouse_genomes_project 13 43636742 43787453 + Jarid2 protein_coding processed_transcript MGP_LPJ_T0036768.1 MGP_LPJ_G0020411.1 mouse_genomes_project 13 43637159 43837831 + MGP_LPJ_P0036768 Jarid2 protein_coding protein_coding MGP_LPJ_T0036769.1 MGP_LPJ_G0020411.1 mouse_genomes_project 13 43637175 43736144 + MGP_LPJ_P0036769 Jarid2 protein_coding protein_coding MGP_LPJ_T0036770.1 MGP_LPJ_G0020411.1 mouse_genomes_project 13 43637256 43798729 + Jarid2 protein_coding retained_intron MGP_LPJ_T0036771.1 MGP_LPJ_G0020411.1 mouse_genomes_project 13 43637258 43837828 + Jarid2 protein_coding retained_intron MGP_LPJ_T0036772.1 MGP_LPJ_G0020411.1 mouse_genomes_project 13 43637485 43798449 + MGP_LPJ_P0036772 Jarid2 protein_coding nonsense_mediated_decay MGP_LPJ_T0036773.1 MGP_LPJ_G0020411.1 mouse_genomes_project 13 43637746 43787444 + Jarid2 protein_coding processed_transcript MGP_LPJ_T0036774.1 MGP_LPJ_G0020411.1 mouse_genomes_project 13 43641037 43787416 + Jarid2 protein_coding processed_transcript MGP_LPJ_T0036775.1 MGP_LPJ_G0020411.1 mouse_genomes_project 13 43754193 43830506 + MGP_LPJ_P0036775 Jarid2 protein_coding protein_coding MGP_LPJ_T0036776.1 MGP_LPJ_G0020411.1 mouse_genomes_project 13 43754285 43810211 + MGP_LPJ_P0036776 Jarid2 protein_coding nonsense_mediated_decay MGP_LPJ_T0037472.1 MGP_LPJ_G0020662.1 mouse_genomes_project 13 74765471 74791259 - MGP_LPJ_P0037472 Cep72 protein_coding protein_coding MGP_LPJ_T0036698.1 MGP_LPJ_G0020383.1 mouse_genomes_project 13 37568643 37596862 - MGP_LPJ_P0036698 Slc35b3 protein_coding unknown_likely_coding MGP_LPJ_T0036699.1 MGP_LPJ_G0020383.1 mouse_genomes_project 13 37568651 37596951 - MGP_LPJ_P0036699 Slc35b3 protein_coding protein_coding MGP_LPJ_T0036700.1 MGP_LPJ_G0020383.1 mouse_genomes_project 13 37568651 37597289 - MGP_LPJ_P0036700 Slc35b3 protein_coding protein_coding MGP_LPJ_T0036491.1 MGP_LPJ_G0020290.1 mouse_genomes_project 13 22790761 22818219 - MGP_LPJ_P0036491 Mrs2 protein_coding protein_coding MGP_LPJ_T0036622.1 MGP_LPJ_G0020352.1 mouse_genomes_project 13 32334076 32365314 + MGP_LPJ_P0036622 Ripk1 protein_coding protein_coding MGP_LPJ_T0036623.1 MGP_LPJ_G0020352.1 mouse_genomes_project 13 32334113 32346401 + Ripk1 protein_coding retained_intron MGP_LPJ_T0036624.1 MGP_LPJ_G0020352.1 mouse_genomes_project 13 32334587 32366807 + MGP_LPJ_P0036624 Ripk1 protein_coding protein_coding MGP_LPJ_T0036625.1 MGP_LPJ_G0020352.1 mouse_genomes_project 13 32341412 32364419 + MGP_LPJ_P0036625 Ripk1 protein_coding protein_coding MGP_LPJ_T0101847.1 MGP_LPJ_G0039884.1 mouse_genomes_project 13 21497668 21498351 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0036102.1 MGP_LPJ_G0020110.1 mouse_genomes_project 13 1162350 1181294 + MGP_LPJ_P0036102 Akr1c21 protein_coding protein_coding MGP_LPJ_T0036103.1 MGP_LPJ_G0020110.1 mouse_genomes_project 13 1170067 1174252 + Akr1c21 protein_coding retained_intron MGP_LPJ_T0012905.1 MGP_LPJ_G0010996.1 mouse_genomes_project 13 31350698 31351505 - processed_pseudogene processed_pseudogene MGP_LPJ_T0037313.1 MGP_LPJ_G0020581.1 mouse_genomes_project 13 64453055 64482561 + MGP_LPJ_P0037313 Habp4 protein_coding protein_coding MGP_LPJ_T0036426.1 MGP_LPJ_G0020270.1 mouse_genomes_project 13 21515051 21516479 - MGP_LPJ_P0036426 Hist1h3a protein_coding protein_coding MGP_LPJ_T0036899.1 MGP_LPJ_G0020458.1 mouse_genomes_project 13 50900092 51048255 - MGP_LPJ_P0036899 Shc3 protein_coding protein_coding MGP_LPJ_T0011371.1 MGP_LPJ_G0009489.1 mouse_genomes_project 13 56519523 56519772 + Gm27698 misc_RNA misc_RNA MGP_LPJ_T0037437.1 MGP_LPJ_G0020646.1 mouse_genomes_project 13 74011700 74011966 + MGP_LPJ_P0037437 Gm10263 protein_coding protein_coding MGP_LPJ_T0036580.1 MGP_LPJ_G0020336.1 mouse_genomes_project 13 31050688 31059695 - MGP_LPJ_P0036580 Serpinb1a protein_coding protein_coding MGP_LPJ_T0036581.1 MGP_LPJ_G0020336.1 mouse_genomes_project 13 31050689 31059695 - MGP_LPJ_P0036581 Serpinb1a protein_coding protein_coding MGP_LPJ_T0012953.1 MGP_LPJ_G0011044.1 mouse_genomes_project 13 114448395 114452414 - processed_pseudogene processed_pseudogene MGP_LPJ_T0036393.1 MGP_LPJ_G0020244.1 mouse_genomes_project 13 21189374 21198278 - MGP_LPJ_P0036393 Btn1a1 protein_coding protein_coding MGP_LPJ_T0036394.1 MGP_LPJ_G0020244.1 mouse_genomes_project 13 21196150 21198304 - MGP_LPJ_P0036394 Btn1a1 protein_coding protein_coding MGP_LPJ_T0036189.1 MGP_LPJ_G0020130.1 mouse_genomes_project 13 9117580 9193380 - MGP_LPJ_P0036189 Actn2 protein_coding protein_coding MGP_LPJ_T0036190.1 MGP_LPJ_G0020130.1 mouse_genomes_project 13 9117589 9193344 - MGP_LPJ_P0036190 Actn2 protein_coding protein_coding MGP_LPJ_T0036191.1 MGP_LPJ_G0020130.1 mouse_genomes_project 13 9158785 9193352 - MGP_LPJ_P0036191 Actn2 protein_coding protein_coding MGP_LPJ_T0036881.1 MGP_LPJ_G0020452.1 mouse_genomes_project 13 49380739 49382576 - MGP_LPJ_P0036881 Gm17611 protein_coding protein_coding MGP_LPJ_T0036326.1 MGP_LPJ_G0020189.1 mouse_genomes_project 13 19173685 19174639 - MGP_LPJ_P0036326 Olfr1361 protein_coding protein_coding MGP_LPJ_T0101851.1 MGP_LPJ_G0039888.1 mouse_genomes_project 13 31068454 31076642 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0009970.1 MGP_LPJ_G0008088.1 mouse_genomes_project 13 88697182 88697292 + Gm24935 miRNA miRNA MGP_LPJ_T0036534.1 MGP_LPJ_G0020315.1 mouse_genomes_project 13 26060490 26067827 + MGP_LPJ_P0036534 Prl4a1 protein_coding protein_coding MGP_LPJ_T0009950.1 MGP_LPJ_G0008068.1 mouse_genomes_project 13 54259313 54259450 + Gm24195 miRNA miRNA MGP_LPJ_T0003527.1 MGP_LPJ_G0003213.1 mouse_genomes_project 13 114107051 114116579 - Gm15288 antisense antisense MGP_LPJ_T0037006.1 MGP_LPJ_G0020485.1 mouse_genomes_project 13 54389991 54426708 + MGP_LPJ_P0037006 Cdhr2 protein_coding protein_coding MGP_LPJ_T0037354.1 MGP_LPJ_G0020603.1 mouse_genomes_project 13 67413718 67444658 - protein_coding processed_transcript MGP_LPJ_T0037355.1 MGP_LPJ_G0020603.1 mouse_genomes_project 13 67413718 67455279 - MGP_LPJ_P0037355 protein_coding nonsense_mediated_decay MGP_LPJ_T0037356.1 MGP_LPJ_G0020603.1 mouse_genomes_project 13 67413719 67444743 - MGP_LPJ_P0037356 protein_coding protein_coding MGP_LPJ_T0037358.1 MGP_LPJ_G0020603.1 mouse_genomes_project 13 67418474 67444743 - protein_coding processed_transcript MGP_LPJ_T0037360.1 MGP_LPJ_G0020603.1 mouse_genomes_project 13 67452138 67455334 - protein_coding processed_transcript MGP_LPJ_T0036781.1 MGP_LPJ_G0020415.1 mouse_genomes_project 13 44443591 44482817 + MGP_LPJ_P0036781 Gmpr protein_coding protein_coding MGP_LPJ_T0036782.1 MGP_LPJ_G0020415.1 mouse_genomes_project 13 44449988 44482333 + MGP_LPJ_P0036782 Gmpr protein_coding protein_coding MGP_LPJ_T0036783.1 MGP_LPJ_G0020415.1 mouse_genomes_project 13 44475246 44478985 + Gmpr protein_coding retained_intron MGP_LPJ_T0003456.1 MGP_LPJ_G0003172.1 mouse_genomes_project 13 22537117 22543405 + 1700016G14Rik antisense antisense MGP_LPJ_T0003511.1 MGP_LPJ_G0003203.1 mouse_genomes_project 13 95107984 95112480 + Gm15622 antisense antisense MGP_LPJ_T0037422.1 MGP_LPJ_G0020639.1 mouse_genomes_project 13 70388043 70394223 + MGP_LPJ_P0037422 Med10 protein_coding protein_coding MGP_LPJ_T0037073.1 MGP_LPJ_G0020504.1 mouse_genomes_project 13 55155348 55166848 - MGP_LPJ_P0037073 F12 protein_coding protein_coding MGP_LPJ_T0037074.1 MGP_LPJ_G0020504.1 mouse_genomes_project 13 55155454 55166834 - MGP_LPJ_P0037074 F12 protein_coding protein_coding MGP_LPJ_T0011360.1 MGP_LPJ_G0009478.1 mouse_genomes_project 13 6376546 6376798 - Gm23496 misc_RNA misc_RNA MGP_LPJ_T0012897.1 MGP_LPJ_G0010988.1 mouse_genomes_project 13 27197012 27197521 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003468.1 MGP_LPJ_G0003181.1 mouse_genomes_project 13 41946203 41954168 - Gm15813 antisense antisense MGP_LPJ_T0036533.1 MGP_LPJ_G0020314.1 mouse_genomes_project 13 25913776 25914036 + MGP_LPJ_P0036533 protein_coding protein_coding MGP_LPJ_T0101824.1 MGP_LPJ_G0039861.1 mouse_genomes_project 13 19944002 19944888 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0036626.1 MGP_LPJ_G0020353.1 mouse_genomes_project 13 32369276 32406628 + MGP_LPJ_P0036626 Bphl protein_coding protein_coding MGP_LPJ_T0037623.1 MGP_LPJ_G0020701.1 mouse_genomes_project 13 90977723 91068729 - MGP_LPJ_P0037623 Vcan protein_coding protein_coding MGP_LPJ_T0037624.1 MGP_LPJ_G0020701.1 mouse_genomes_project 13 90978750 91068542 - MGP_LPJ_P0037624 Vcan protein_coding protein_coding MGP_LPJ_T0037625.1 MGP_LPJ_G0020701.1 mouse_genomes_project 13 90979055 91068554 - MGP_LPJ_P0037625 Vcan protein_coding protein_coding MGP_LPJ_T0037626.1 MGP_LPJ_G0020701.1 mouse_genomes_project 13 90979427 91002003 - MGP_LPJ_P0037626 Vcan protein_coding protein_coding MGP_LPJ_T0037627.1 MGP_LPJ_G0020701.1 mouse_genomes_project 13 90979466 91068464 - MGP_LPJ_P0037627 Vcan protein_coding protein_coding MGP_LPJ_T0037628.1 MGP_LPJ_G0020701.1 mouse_genomes_project 13 90980065 91002792 - MGP_LPJ_P0037628 Vcan protein_coding protein_coding MGP_LPJ_T0037629.1 MGP_LPJ_G0020701.1 mouse_genomes_project 13 91035455 91046655 - Vcan protein_coding retained_intron MGP_LPJ_T0037630.1 MGP_LPJ_G0020701.1 mouse_genomes_project 13 91035998 91068538 - MGP_LPJ_P0037630 Vcan protein_coding protein_coding MGP_LPJ_T0037631.1 MGP_LPJ_G0020701.1 mouse_genomes_project 13 91050116 91066617 - MGP_LPJ_P0037631 Vcan protein_coding protein_coding MGP_LPJ_T0037636.1 MGP_LPJ_G0020703.1 mouse_genomes_project 13 91423714 91449201 + MGP_LPJ_P0037636 Tmem167 protein_coding protein_coding MGP_LPJ_T0037637.1 MGP_LPJ_G0020703.1 mouse_genomes_project 13 91424326 91483246 + MGP_LPJ_P0037637 Tmem167 protein_coding nonsense_mediated_decay MGP_LPJ_T0037638.1 MGP_LPJ_G0020703.1 mouse_genomes_project 13 91424354 91441604 + MGP_LPJ_P0037638 Tmem167 protein_coding protein_coding MGP_LPJ_T0037593.1 MGP_LPJ_G0020695.1 mouse_genomes_project 13 85337457 85413793 + MGP_LPJ_P0037593 Tmem161b protein_coding protein_coding MGP_LPJ_T0100288.1 MGP_LPJ_G0038551.1 mouse_genomes_project 13 76584851 76584981 + Gm23127 snoRNA snoRNA MGP_LPJ_T0101829.1 MGP_LPJ_G0039866.1 mouse_genomes_project 13 20153767 20154918 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0038118.1 MGP_LPJ_G0020864.1 mouse_genomes_project 13 120096266 120154929 + MGP_LPJ_P0038118 Emb protein_coding protein_coding MGP_LPJ_T0003493.1 MGP_LPJ_G0003196.1 mouse_genomes_project 13 74412291 74422304 + Slc6a19os antisense antisense MGP_LPJ_T0003494.1 MGP_LPJ_G0003196.1 mouse_genomes_project 13 74416184 74421365 + Slc6a19os antisense antisense MGP_LPJ_T0101820.1 MGP_LPJ_G0039857.1 mouse_genomes_project 13 19634395 19634827 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0037381.1 MGP_LPJ_G0020618.1 mouse_genomes_project 13 67898560 67908593 - MGP_LPJ_P0037381 Zfp58 protein_coding protein_coding MGP_LPJ_T0037382.1 MGP_LPJ_G0020618.1 mouse_genomes_project 13 67898561 67908645 - MGP_LPJ_P0037382 Zfp58 protein_coding protein_coding MGP_LPJ_T0037384.1 MGP_LPJ_G0020618.1 mouse_genomes_project 13 67900045 67908577 - MGP_LPJ_P0037384 Zfp58 protein_coding protein_coding MGP_LPJ_T0037385.1 MGP_LPJ_G0020618.1 mouse_genomes_project 13 67900260 67908534 - MGP_LPJ_P0037385 Zfp58 protein_coding protein_coding MGP_LPJ_T0038072.1 MGP_LPJ_G0020840.1 mouse_genomes_project 13 115429036 115498636 + MGP_LPJ_P0038072 Plpp1 protein_coding protein_coding MGP_LPJ_T0038073.1 MGP_LPJ_G0020840.1 mouse_genomes_project 13 115429065 115498402 + MGP_LPJ_P0038073 Plpp1 protein_coding protein_coding MGP_LPJ_T0036979.1 MGP_LPJ_G0020481.1 mouse_genomes_project 13 54271406 54272358 + MGP_LPJ_P0036979 Higd2a protein_coding protein_coding MGP_LPJ_T0036657.1 MGP_LPJ_G0020366.1 mouse_genomes_project 13 34321738 34334621 - MGP_LPJ_P0036657 Rpp40 protein_coding protein_coding MGP_LPJ_T0036658.1 MGP_LPJ_G0020366.1 mouse_genomes_project 13 34324961 34327126 - MGP_LPJ_P0036658 Rpp40 protein_coding protein_coding MGP_LPJ_T0036659.1 MGP_LPJ_G0020366.1 mouse_genomes_project 13 34324969 34334590 - Rpp40 protein_coding retained_intron MGP_LPJ_T0036660.1 MGP_LPJ_G0020366.1 mouse_genomes_project 13 34324972 34334606 - MGP_LPJ_P0036660 Rpp40 protein_coding protein_coding MGP_LPJ_T0037234.1 MGP_LPJ_G0020549.1 mouse_genomes_project 13 59685388 59693737 + MGP_LPJ_P0037234 Spata31d1b protein_coding protein_coding MGP_LPJ_T0036382.1 MGP_LPJ_G0020236.1 mouse_genomes_project 13 20713746 20714649 + MGP_LPJ_P0036382 Vmn1r215 protein_coding protein_coding MGP_LPJ_T0036723.1 MGP_LPJ_G0020394.1 mouse_genomes_project 13 39978256 40003512 + MGP_LPJ_P0036723 Smim13 protein_coding protein_coding MGP_LPJ_T0011378.1 MGP_LPJ_G0009496.1 mouse_genomes_project 13 105520955 105521236 - Gm24441 misc_RNA misc_RNA MGP_LPJ_T0036395.1 MGP_LPJ_G0020245.1 mouse_genomes_project 13 21210102 21222816 - MGP_LPJ_P0036395 Btn2a2 protein_coding protein_coding MGP_LPJ_T0036396.1 MGP_LPJ_G0020245.1 mouse_genomes_project 13 21210102 21222833 - MGP_LPJ_P0036396 Btn2a2 protein_coding protein_coding MGP_LPJ_T0036397.1 MGP_LPJ_G0020245.1 mouse_genomes_project 13 21210313 21222823 - MGP_LPJ_P0036397 Btn2a2 protein_coding protein_coding MGP_LPJ_T0036235.1 MGP_LPJ_G0020146.1 mouse_genomes_project 13 11813476 11825264 + MGP_LPJ_P0036235 Psma2 protein_coding protein_coding MGP_LPJ_T0036536.1 MGP_LPJ_G0020317.1 mouse_genomes_project 13 27011649 27016462 - MGP_LPJ_P0036536 Sox4 protein_coding protein_coding MGP_LPJ_T0099042.1 MGP_LPJ_G0037305.1 mouse_genomes_project 13 114885700 114885853 + Gm22768 snRNA snRNA MGP_LPJ_T0037452.1 MGP_LPJ_G0020654.1 mouse_genomes_project 13 74391474 74413246 - MGP_LPJ_P0037452 Slc6a19 protein_coding protein_coding MGP_LPJ_T0037453.1 MGP_LPJ_G0020654.1 mouse_genomes_project 13 74391476 74413161 - Slc6a19 protein_coding retained_intron MGP_LPJ_T0037454.1 MGP_LPJ_G0020654.1 mouse_genomes_project 13 74391476 74404357 - Slc6a19 protein_coding processed_transcript MGP_LPJ_T0037455.1 MGP_LPJ_G0020654.1 mouse_genomes_project 13 74400811 74417333 - Slc6a19 protein_coding processed_transcript MGP_LPJ_T0037456.1 MGP_LPJ_G0020654.1 mouse_genomes_project 13 74401293 74404100 - Slc6a19 protein_coding processed_transcript MGP_LPJ_T0037457.1 MGP_LPJ_G0020654.1 mouse_genomes_project 13 74401462 74413147 - MGP_LPJ_P0037457 Slc6a19 protein_coding nonsense_mediated_decay MGP_LPJ_T0037458.1 MGP_LPJ_G0020654.1 mouse_genomes_project 13 74401500 74403978 - Slc6a19 protein_coding processed_transcript MGP_LPJ_T0036755.1 MGP_LPJ_G0020406.1 mouse_genomes_project 13 42229330 42239761 + MGP_LPJ_P0036755 Nol7 protein_coding protein_coding MGP_LPJ_T0006526.1 MGP_LPJ_G0005422.1 mouse_genomes_project 13 2491621 2493835 - 1700016G22Rik lincRNA lincRNA MGP_LPJ_T0006527.1 MGP_LPJ_G0005422.1 mouse_genomes_project 13 2491621 2494209 - 1700016G22Rik lincRNA lincRNA MGP_LPJ_T0037530.1 MGP_LPJ_G0020685.1 mouse_genomes_project 13 78525334 79004423 + MGP_LPJ_P0037530 Fam172a protein_coding protein_coding MGP_LPJ_T0037531.1 MGP_LPJ_G0020685.1 mouse_genomes_project 13 78525339 79004416 + MGP_LPJ_P0037531 Fam172a protein_coding protein_coding MGP_LPJ_T0037067.1 MGP_LPJ_G0020500.1 mouse_genomes_project 13 55075893 55096754 - MGP_LPJ_P0037067 Lman2 protein_coding protein_coding MGP_LPJ_T0036665.1 MGP_LPJ_G0020370.1 mouse_genomes_project 13 35193982 35203058 - MGP_LPJ_P0036665 Nrn1 protein_coding protein_coding MGP_LPJ_T0036666.1 MGP_LPJ_G0020370.1 mouse_genomes_project 13 35194815 35198911 - MGP_LPJ_P0036666 Nrn1 protein_coding protein_coding MGP_LPJ_T0009978.1 MGP_LPJ_G0008096.1 mouse_genomes_project 13 111779311 111779392 + Mir582 miRNA miRNA MGP_LPJ_T0036188.1 MGP_LPJ_G0020129.1 mouse_genomes_project 13 9028175 9103160 - MGP_LPJ_P0036188 Mtr protein_coding protein_coding MGP_LPJ_T0006567.1 MGP_LPJ_G0005451.1 mouse_genomes_project 13 35968138 35969135 - Gm29458 lincRNA lincRNA MGP_LPJ_T0036756.1 MGP_LPJ_G0020407.1 mouse_genomes_project 13 42239575 42321003 - MGP_LPJ_P0036756 protein_coding protein_coding MGP_LPJ_T0036801.1 MGP_LPJ_G0020424.1 mouse_genomes_project 13 46039225 46041508 - MGP_LPJ_P0036801 Nhlrc1 protein_coding protein_coding MGP_LPJ_T0100281.1 MGP_LPJ_G0038544.1 mouse_genomes_project 13 51140894 51141030 + Gm22806 snoRNA snoRNA MGP_LPJ_T0036185.1 MGP_LPJ_G0020128.1 mouse_genomes_project 13 8351961 8945765 - MGP_LPJ_P0036185 Ryr2 protein_coding unknown_likely_coding MGP_LPJ_T0036186.1 MGP_LPJ_G0020128.1 mouse_genomes_project 13 8351971 8946264 - MGP_LPJ_P0036186 Ryr2 protein_coding protein_coding MGP_LPJ_T0036187.1 MGP_LPJ_G0020128.1 mouse_genomes_project 13 8351971 8946264 - MGP_LPJ_P0036187 Ryr2 protein_coding protein_coding MGP_LPJ_T0009964.1 MGP_LPJ_G0008082.1 mouse_genomes_project 13 63538110 63538178 + Mir24-1 miRNA miRNA MGP_LPJ_T0012931.1 MGP_LPJ_G0011022.1 mouse_genomes_project 13 77508101 77508521 - processed_pseudogene processed_pseudogene MGP_LPJ_T0037100.1 MGP_LPJ_G0020509.1 mouse_genomes_project 13 55265645 55270956 - MGP_LPJ_P0037100 Dok3 protein_coding protein_coding MGP_LPJ_T0017310.1 MGP_LPJ_G0015177.1 mouse_genomes_project 13 122461350 122464319 - Gm9752 processed_transcript processed_transcript MGP_LPJ_T0037321.1 MGP_LPJ_G0020586.1 mouse_genomes_project 13 64803276 64821039 - MGP_LPJ_P0037321 1190003K10Rik protein_coding protein_coding MGP_LPJ_T0037340.1 MGP_LPJ_G0020598.1 mouse_genomes_project 13 67249997 67257006 + MGP_LPJ_P0037340 Gm10767 protein_coding protein_coding MGP_LPJ_T0036249.1 MGP_LPJ_G0020155.1 mouse_genomes_project 13 15475559 15756196 - MGP_LPJ_P0036249 Pou6f2 protein_coding protein_coding MGP_LPJ_T0036250.1 MGP_LPJ_G0020155.1 mouse_genomes_project 13 15479544 15756196 - MGP_LPJ_P0036250 Pou6f2 protein_coding protein_coding MGP_LPJ_T0036251.1 MGP_LPJ_G0020155.1 mouse_genomes_project 13 15479575 15537609 - MGP_LPJ_P0036251 Pou6f2 protein_coding nonsense_mediated_decay MGP_LPJ_T0036252.1 MGP_LPJ_G0020155.1 mouse_genomes_project 13 15501159 15552312 - Pou6f2 protein_coding processed_transcript MGP_LPJ_T0036253.1 MGP_LPJ_G0020155.1 mouse_genomes_project 13 15501159 15537614 - MGP_LPJ_P0036253 Pou6f2 protein_coding protein_coding MGP_LPJ_T0036254.1 MGP_LPJ_G0020155.1 mouse_genomes_project 13 15511757 15756196 - Pou6f2 protein_coding processed_transcript MGP_LPJ_T0037976.1 MGP_LPJ_G0020815.1 mouse_genomes_project 13 107631093 107635534 + MGP_LPJ_P0037976 Htr1a protein_coding protein_coding MGP_LPJ_T0037314.1 MGP_LPJ_G0020582.1 mouse_genomes_project 13 64489944 64576730 - MGP_LPJ_P0037314 Cdc14b protein_coding protein_coding MGP_LPJ_T0037315.1 MGP_LPJ_G0020582.1 mouse_genomes_project 13 64489944 64550645 - MGP_LPJ_P0037315 Cdc14b protein_coding protein_coding MGP_LPJ_T0037316.1 MGP_LPJ_G0020582.1 mouse_genomes_project 13 64492737 64576636 - MGP_LPJ_P0037316 Cdc14b protein_coding protein_coding MGP_LPJ_T0037317.1 MGP_LPJ_G0020582.1 mouse_genomes_project 13 64494015 64576507 - MGP_LPJ_P0037317 Cdc14b protein_coding unknown_likely_coding MGP_LPJ_T0036560.1 MGP_LPJ_G0020324.1 mouse_genomes_project 13 28876208 28893910 + MGP_LPJ_P0036560 Irf4 protein_coding protein_coding MGP_LPJ_T0036561.1 MGP_LPJ_G0020324.1 mouse_genomes_project 13 28876208 28893910 + MGP_LPJ_P0036561 Irf4 protein_coding protein_coding MGP_LPJ_T0036692.1 MGP_LPJ_G0020379.1 mouse_genomes_project 13 36934146 37097708 + MGP_LPJ_P0036692 Bmp6 protein_coding protein_coding MGP_LPJ_T0099044.1 MGP_LPJ_G0037307.1 mouse_genomes_project 13 122830193 122830301 + Gm23308 snRNA snRNA MGP_LPJ_T0012912.1 MGP_LPJ_G0011003.1 mouse_genomes_project 13 44108960 44109963 - processed_pseudogene processed_pseudogene MGP_LPJ_T0037755.1 MGP_LPJ_G0020741.1 mouse_genomes_project 13 96902846 96915779 + MGP_LPJ_P0037755 Zbed3 protein_coding protein_coding MGP_LPJ_T0003524.1 MGP_LPJ_G0003210.1 mouse_genomes_project 13 106828414 106843832 + antisense antisense MGP_LPJ_T0017280.1 MGP_LPJ_G0015158.1 mouse_genomes_project 13 12659504 12681237 - Gm6556 processed_transcript antisense MGP_LPJ_T0017281.1 MGP_LPJ_G0015158.1 mouse_genomes_project 13 12680383 12684404 - Gm6556 processed_transcript TEC MGP_LPJ_T0006614.1 MGP_LPJ_G0005483.1 mouse_genomes_project 13 73274245 73275075 - Gm20554 lincRNA lincRNA MGP_LPJ_T0003473.1 MGP_LPJ_G0003186.1 mouse_genomes_project 13 55347292 55349895 - Gm15911 antisense antisense MGP_LPJ_T0036568.1 MGP_LPJ_G0020330.1 mouse_genomes_project 13 29772317 29777909 + MGP_LPJ_P0036568 Foxf2 protein_coding protein_coding MGP_LPJ_T0038069.1 MGP_LPJ_G0020838.1 mouse_genomes_project 13 115209345 115268470 - MGP_LPJ_P0038069 Ddx4 protein_coding protein_coding MGP_LPJ_T0038070.1 MGP_LPJ_G0020838.1 mouse_genomes_project 13 115209345 115268470 - MGP_LPJ_P0038070 Ddx4 protein_coding protein_coding MGP_LPJ_T0003447.1 MGP_LPJ_G0003164.1 mouse_genomes_project 13 16558586 16590234 - Gm43385 antisense antisense MGP_LPJ_T0037448.1 MGP_LPJ_G0020651.1 mouse_genomes_project 13 74308432 74325083 + MGP_LPJ_P0037448 Clptm1l protein_coding protein_coding MGP_LPJ_T0038111.1 MGP_LPJ_G0020861.1 mouse_genomes_project 13 119151891 119163192 - MGP_LPJ_P0038111 Isl1 protein_coding protein_coding MGP_LPJ_T0038112.1 MGP_LPJ_G0020861.1 mouse_genomes_project 13 119152874 119162925 - MGP_LPJ_P0038112 Isl1 protein_coding protein_coding MGP_LPJ_T0038113.1 MGP_LPJ_G0020861.1 mouse_genomes_project 13 119153006 119156934 - Isl1 protein_coding retained_intron MGP_LPJ_T0038114.1 MGP_LPJ_G0020861.1 mouse_genomes_project 13 119156628 119159905 - Isl1 protein_coding processed_transcript MGP_LPJ_T0038115.1 MGP_LPJ_G0020861.1 mouse_genomes_project 13 119160412 119163188 - Isl1 protein_coding retained_intron MGP_LPJ_T0012880.1 MGP_LPJ_G0010971.1 mouse_genomes_project 13 21682969 21683334 - processed_pseudogene processed_pseudogene MGP_LPJ_T0036757.1 MGP_LPJ_G0020408.1 mouse_genomes_project 13 42380314 42400179 - MGP_LPJ_P0036757 Mcur1 protein_coding protein_coding MGP_LPJ_T0009944.1 MGP_LPJ_G0008062.1 mouse_genomes_project 13 47672416 47672519 - Mirlet7d miRNA miRNA MGP_LPJ_T0017304.1 MGP_LPJ_G0015173.1 mouse_genomes_project 13 91065678 91171786 + Gm4117 processed_transcript processed_transcript MGP_LPJ_T0017305.1 MGP_LPJ_G0015173.1 mouse_genomes_project 13 91065682 91217506 + Gm4117 processed_transcript processed_transcript MGP_LPJ_T0101862.1 MGP_LPJ_G0039899.1 mouse_genomes_project 13 32100706 32103264 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0003482.1 MGP_LPJ_G0003190.1 mouse_genomes_project 13 64550815 64570226 + 1810034E14Rik antisense antisense MGP_LPJ_T0003483.1 MGP_LPJ_G0003190.1 mouse_genomes_project 13 64550887 64568548 + 1810034E14Rik antisense antisense MGP_LPJ_T0003484.1 MGP_LPJ_G0003190.1 mouse_genomes_project 13 64568550 64570226 + 1810034E14Rik antisense antisense MGP_LPJ_T0101828.1 MGP_LPJ_G0039865.1 mouse_genomes_project 13 20053015 20053381 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0037698.1 MGP_LPJ_G0020724.1 mouse_genomes_project 13 94594111 94640882 - MGP_LPJ_P0037698 Papd4 protein_coding protein_coding MGP_LPJ_T0006600.1 MGP_LPJ_G0005473.1 mouse_genomes_project 13 55602304 55603040 - Gm28760 lincRNA lincRNA MGP_LPJ_T0006601.1 MGP_LPJ_G0005473.1 mouse_genomes_project 13 55602304 55603037 - Gm28760 lincRNA lincRNA MGP_LPJ_T0036333.1 MGP_LPJ_G0020196.1 mouse_genomes_project 13 19249044 19249818 + MGP_LPJ_P0036333 Hist1h4j protein_coding protein_coding MGP_LPJ_T0036100.1 MGP_LPJ_G0020109.1 mouse_genomes_project 13 1064071 1108823 - MGP_LPJ_P0036100 Akr1c20 protein_coding protein_coding MGP_LPJ_T0036101.1 MGP_LPJ_G0020109.1 mouse_genomes_project 13 1090579 1108838 - MGP_LPJ_P0036101 Akr1c20 protein_coding protein_coding MGP_LPJ_T0012877.1 MGP_LPJ_G0010968.1 mouse_genomes_project 13 20741654 20742118 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012889.1 MGP_LPJ_G0010980.1 mouse_genomes_project 13 23499196 23500058 - processed_pseudogene processed_pseudogene MGP_LPJ_T0036408.1 MGP_LPJ_G0020256.1 mouse_genomes_project 13 21329350 21329743 + MGP_LPJ_P0036408 Hist1h4d protein_coding protein_coding MGP_LPJ_T0037467.1 MGP_LPJ_G0020660.1 mouse_genomes_project 13 74718087 74718273 - MGP_LPJ_P0037467 Gm10126 protein_coding protein_coding MGP_LPJ_T0101832.1 MGP_LPJ_G0039869.1 mouse_genomes_project 13 20239577 20240572 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0036670.1 MGP_LPJ_G0020373.1 mouse_genomes_project 13 36320774 36443518 + MGP_LPJ_P0036670 Rreb1 protein_coding protein_coding MGP_LPJ_T0036671.1 MGP_LPJ_G0020373.1 mouse_genomes_project 13 36373769 36443495 + MGP_LPJ_P0036671 Rreb1 protein_coding protein_coding MGP_LPJ_T0036672.1 MGP_LPJ_G0020373.1 mouse_genomes_project 13 36373833 36485934 + MGP_LPJ_P0036672 Rreb1 protein_coding protein_coding MGP_LPJ_T0036673.1 MGP_LPJ_G0020373.1 mouse_genomes_project 13 36374109 36503419 + MGP_LPJ_P0036673 Rreb1 protein_coding protein_coding MGP_LPJ_T0036674.1 MGP_LPJ_G0020373.1 mouse_genomes_project 13 36374726 36483088 + MGP_LPJ_P0036674 Rreb1 protein_coding protein_coding MGP_LPJ_T0036675.1 MGP_LPJ_G0020373.1 mouse_genomes_project 13 36374726 36498443 + MGP_LPJ_P0036675 Rreb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0036676.1 MGP_LPJ_G0020373.1 mouse_genomes_project 13 36375187 36483090 + MGP_LPJ_P0036676 Rreb1 protein_coding protein_coding MGP_LPJ_T0036677.1 MGP_LPJ_G0020373.1 mouse_genomes_project 13 36407655 36443583 + MGP_LPJ_P0036677 Rreb1 protein_coding protein_coding MGP_LPJ_T0036678.1 MGP_LPJ_G0020373.1 mouse_genomes_project 13 36438102 36503421 + MGP_LPJ_P0036678 Rreb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0036679.1 MGP_LPJ_G0020373.1 mouse_genomes_project 13 36438539 36503413 + MGP_LPJ_P0036679 Rreb1 protein_coding protein_coding MGP_LPJ_T0036680.1 MGP_LPJ_G0020373.1 mouse_genomes_project 13 36498434 36500625 + MGP_LPJ_P0036680 Rreb1 protein_coding protein_coding MGP_LPJ_T0011361.1 MGP_LPJ_G0009479.1 mouse_genomes_project 13 9579740 9580038 + Gm23081 misc_RNA misc_RNA MGP_LPJ_T0036201.1 MGP_LPJ_G0020135.1 mouse_genomes_project 13 9512588 9567900 - MGP_LPJ_P0036201 Gpr137b protein_coding unknown_likely_coding MGP_LPJ_T0036202.1 MGP_LPJ_G0020135.1 mouse_genomes_project 13 9512635 9567997 - MGP_LPJ_P0036202 Gpr137b protein_coding protein_coding MGP_LPJ_T0003452.1 MGP_LPJ_G0003168.1 mouse_genomes_project 13 20239906 20240718 + Gm11314 antisense antisense MGP_LPJ_T0037435.1 MGP_LPJ_G0020645.1 mouse_genomes_project 13 73944416 73955108 + MGP_LPJ_P0037435 Irx4 protein_coding protein_coding MGP_LPJ_T0037436.1 MGP_LPJ_G0020645.1 mouse_genomes_project 13 73944434 73955108 + MGP_LPJ_P0037436 Irx4 protein_coding protein_coding MGP_LPJ_T0037118.1 MGP_LPJ_G0020519.1 mouse_genomes_project 13 55541988 55569289 + MGP_LPJ_P0037118 Catsper3 protein_coding protein_coding MGP_LPJ_T0037119.1 MGP_LPJ_G0020519.1 mouse_genomes_project 13 55541999 55569320 + MGP_LPJ_P0037119 Catsper3 protein_coding protein_coding MGP_LPJ_T0036207.1 MGP_LPJ_G0020139.1 mouse_genomes_project 13 11103370 11151464 + MGP_LPJ_P0036207 B3galnt2 protein_coding protein_coding MGP_LPJ_T0037779.1 MGP_LPJ_G0020755.1 mouse_genomes_project 13 98218115 98320698 + MGP_LPJ_P0037779 Col4a3bp protein_coding protein_coding MGP_LPJ_T0037780.1 MGP_LPJ_G0020755.1 mouse_genomes_project 13 98218232 98322853 + MGP_LPJ_P0037780 Col4a3bp protein_coding protein_coding MGP_LPJ_T0037781.1 MGP_LPJ_G0020755.1 mouse_genomes_project 13 98218232 98322853 + MGP_LPJ_P0037781 Col4a3bp protein_coding protein_coding MGP_LPJ_T0036246.1 MGP_LPJ_G0020152.1 mouse_genomes_project 13 15051167 15148841 - MGP_LPJ_P0036246 Cdk13 protein_coding protein_coding MGP_LPJ_T0038084.1 MGP_LPJ_G0020847.1 mouse_genomes_project 13 115683537 115687161 - MGP_LPJ_P0038084 Gpx8 protein_coding protein_coding MGP_LPJ_T0037325.1 MGP_LPJ_G0020590.1 mouse_genomes_project 13 65340057 65348205 - MGP_LPJ_P0037325 Prss47 protein_coding protein_coding MGP_LPJ_T0037326.1 MGP_LPJ_G0020590.1 mouse_genomes_project 13 65340368 65347292 - MGP_LPJ_P0037326 Prss47 protein_coding protein_coding MGP_LPJ_T0036415.1 MGP_LPJ_G0020261.1 mouse_genomes_project 13 21428808 21438431 + MGP_LPJ_P0036415 Hist1h2bg protein_coding protein_coding MGP_LPJ_T0009936.1 MGP_LPJ_G0008054.1 mouse_genomes_project 13 19592120 19592249 + Gm44486 miRNA miRNA MGP_LPJ_T0000914.1 MGP_LPJ_G0000842.1 mouse_genomes_project 13 47679048 47681438 - TEC TEC MGP_LPJ_T0037134.1 MGP_LPJ_G0020526.1 mouse_genomes_project 13 56244292 56283735 + MGP_LPJ_P0037134 Slc25a48 protein_coding protein_coding MGP_LPJ_T0036792.1 MGP_LPJ_G0020421.1 mouse_genomes_project 13 45677323 45683455 + MGP_LPJ_P0036792 Fam8a1 protein_coding protein_coding MGP_LPJ_T0036793.1 MGP_LPJ_G0020421.1 mouse_genomes_project 13 45678989 45681613 + Fam8a1 protein_coding retained_intron MGP_LPJ_T0012921.1 MGP_LPJ_G0011012.1 mouse_genomes_project 13 65421663 65421867 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003461.1 MGP_LPJ_G0003176.1 mouse_genomes_project 13 32263045 32266595 + 1110046J04Rik antisense antisense MGP_LPJ_T0003462.1 MGP_LPJ_G0003176.1 mouse_genomes_project 13 32263298 32264883 + 1110046J04Rik antisense antisense MGP_LPJ_T0003463.1 MGP_LPJ_G0003176.1 mouse_genomes_project 13 32264282 32288361 + 1110046J04Rik antisense antisense MGP_LPJ_T0002525.1 MGP_LPJ_G0002428.1 mouse_genomes_project 13 16610054 16610114 + MGP_LPJ_P0002525 Trgj1 TR_J_gene TR_J_gene MGP_LPJ_T0037873.1 MGP_LPJ_G0020786.1 mouse_genomes_project 13 102403699 102435006 - MGP_LPJ_P0037873 Gtf2h2 protein_coding nonsense_mediated_decay MGP_LPJ_T0037874.1 MGP_LPJ_G0020786.1 mouse_genomes_project 13 102403888 102435224 - MGP_LPJ_P0037874 Gtf2h2 protein_coding unknown_likely_coding MGP_LPJ_T0037875.1 MGP_LPJ_G0020786.1 mouse_genomes_project 13 102412046 102435229 - MGP_LPJ_P0037875 Gtf2h2 protein_coding protein_coding MGP_LPJ_T0037876.1 MGP_LPJ_G0020786.1 mouse_genomes_project 13 102412274 102435035 - Gtf2h2 protein_coding retained_intron MGP_LPJ_T0037877.1 MGP_LPJ_G0020786.1 mouse_genomes_project 13 102412274 102435247 - MGP_LPJ_P0037877 Gtf2h2 protein_coding nonsense_mediated_decay MGP_LPJ_T0037878.1 MGP_LPJ_G0020786.1 mouse_genomes_project 13 102419751 102423366 - Gtf2h2 protein_coding processed_transcript MGP_LPJ_T0037879.1 MGP_LPJ_G0020786.1 mouse_genomes_project 13 102421840 102424284 - Gtf2h2 protein_coding processed_transcript MGP_LPJ_T0037880.1 MGP_LPJ_G0020786.1 mouse_genomes_project 13 102424163 102435247 - MGP_LPJ_P0037880 Gtf2h2 protein_coding protein_coding MGP_LPJ_T0037881.1 MGP_LPJ_G0020786.1 mouse_genomes_project 13 102430358 102435042 - Gtf2h2 protein_coding retained_intron MGP_LPJ_T0037882.1 MGP_LPJ_G0020786.1 mouse_genomes_project 13 102431450 102435221 - Gtf2h2 protein_coding processed_transcript MGP_LPJ_T0100302.1 MGP_LPJ_G0038565.1 mouse_genomes_project 13 109267503 109267569 - Gm24431 snoRNA snoRNA MGP_LPJ_T0037255.1 MGP_LPJ_G0020564.1 mouse_genomes_project 13 61000895 61006518 - MGP_LPJ_P0037255 Ctsj protein_coding protein_coding MGP_LPJ_T0036433.1 MGP_LPJ_G0020274.1 mouse_genomes_project 13 21598737 21614334 + MGP_LPJ_P0036433 Slc17a3 protein_coding protein_coding MGP_LPJ_T0003512.1 MGP_LPJ_G0003204.1 mouse_genomes_project 13 95190535 95203640 - AW495222 antisense antisense MGP_LPJ_T0003513.1 MGP_LPJ_G0003204.1 mouse_genomes_project 13 95199722 95203599 - AW495222 antisense antisense MGP_LPJ_T0012857.1 MGP_LPJ_G0010948.1 mouse_genomes_project 13 5664569 5665211 - processed_pseudogene processed_pseudogene MGP_LPJ_T0037532.1 MGP_LPJ_G0020686.1 mouse_genomes_project 13 78857162 78858556 + MGP_LPJ_P0037532 Pou5f2 protein_coding protein_coding MGP_LPJ_T0037171.1 MGP_LPJ_G0020541.1 mouse_genomes_project 13 58301254 58315289 - MGP_LPJ_P0037171 Hnrnpk protein_coding protein_coding MGP_LPJ_T0037172.1 MGP_LPJ_G0020541.1 mouse_genomes_project 13 58301343 58314741 - MGP_LPJ_P0037172 Hnrnpk protein_coding unknown_likely_coding MGP_LPJ_T0037173.1 MGP_LPJ_G0020541.1 mouse_genomes_project 13 58301351 58314410 - MGP_LPJ_P0037173 Hnrnpk protein_coding protein_coding MGP_LPJ_T0037174.1 MGP_LPJ_G0020541.1 mouse_genomes_project 13 58301351 58314448 - MGP_LPJ_P0037174 Hnrnpk protein_coding protein_coding MGP_LPJ_T0037175.1 MGP_LPJ_G0020541.1 mouse_genomes_project 13 58301351 58310022 - MGP_LPJ_P0037175 Hnrnpk protein_coding protein_coding MGP_LPJ_T0037176.1 MGP_LPJ_G0020541.1 mouse_genomes_project 13 58301449 58314595 - MGP_LPJ_P0037176 Hnrnpk protein_coding protein_coding MGP_LPJ_T0037177.1 MGP_LPJ_G0020541.1 mouse_genomes_project 13 58304155 58314088 - MGP_LPJ_P0037177 Hnrnpk protein_coding protein_coding MGP_LPJ_T0037178.1 MGP_LPJ_G0020541.1 mouse_genomes_project 13 58304347 58307687 - Hnrnpk protein_coding retained_intron MGP_LPJ_T0037179.1 MGP_LPJ_G0020541.1 mouse_genomes_project 13 58304410 58309032 - Hnrnpk protein_coding retained_intron MGP_LPJ_T0037180.1 MGP_LPJ_G0020541.1 mouse_genomes_project 13 58304468 58314049 - MGP_LPJ_P0037180 Hnrnpk protein_coding protein_coding MGP_LPJ_T0037181.1 MGP_LPJ_G0020541.1 mouse_genomes_project 13 58304497 58308913 - Hnrnpk protein_coding retained_intron MGP_LPJ_T0037182.1 MGP_LPJ_G0020541.1 mouse_genomes_project 13 58307131 58314433 - MGP_LPJ_P0037182 Hnrnpk protein_coding protein_coding MGP_LPJ_T0037183.1 MGP_LPJ_G0020541.1 mouse_genomes_project 13 58307161 58314453 - MGP_LPJ_P0037183 Hnrnpk protein_coding protein_coding MGP_LPJ_T0037184.1 MGP_LPJ_G0020541.1 mouse_genomes_project 13 58307231 58309984 - Hnrnpk protein_coding retained_intron MGP_LPJ_T0037185.1 MGP_LPJ_G0020541.1 mouse_genomes_project 13 58307236 58309984 - MGP_LPJ_P0037185 Hnrnpk protein_coding protein_coding MGP_LPJ_T0037186.1 MGP_LPJ_G0020541.1 mouse_genomes_project 13 58307855 58314056 - Hnrnpk protein_coding retained_intron MGP_LPJ_T0037187.1 MGP_LPJ_G0020541.1 mouse_genomes_project 13 58309003 58314062 - MGP_LPJ_P0037187 Hnrnpk protein_coding protein_coding MGP_LPJ_T0037188.1 MGP_LPJ_G0020541.1 mouse_genomes_project 13 58310692 58314448 - Hnrnpk protein_coding retained_intron MGP_LPJ_T0038099.1 MGP_LPJ_G0020857.1 mouse_genomes_project 13 117549691 117560526 + MGP_LPJ_P0038099 Mocs2 protein_coding protein_coding MGP_LPJ_T0038100.1 MGP_LPJ_G0020857.1 mouse_genomes_project 13 117549747 117552572 + Mocs2 protein_coding retained_intron MGP_LPJ_T0038101.1 MGP_LPJ_G0020857.1 mouse_genomes_project 13 117549761 117553492 + Mocs2 protein_coding retained_intron MGP_LPJ_T0038102.1 MGP_LPJ_G0020857.1 mouse_genomes_project 13 117549773 117561175 + Mocs2 protein_coding retained_intron MGP_LPJ_T0038103.1 MGP_LPJ_G0020857.1 mouse_genomes_project 13 117549773 117560843 + MGP_LPJ_P0038103 Mocs2 protein_coding nonsense_mediated_decay MGP_LPJ_T0038104.1 MGP_LPJ_G0020857.1 mouse_genomes_project 13 117549780 117557026 + Mocs2 protein_coding retained_intron MGP_LPJ_T0038105.1 MGP_LPJ_G0020857.1 mouse_genomes_project 13 117549790 117560713 + MGP_LPJ_P0038105 Mocs2 protein_coding protein_coding MGP_LPJ_T0038106.1 MGP_LPJ_G0020857.1 mouse_genomes_project 13 117549797 117560892 + MGP_LPJ_P0038106 Mocs2 protein_coding protein_coding MGP_LPJ_T0038107.1 MGP_LPJ_G0020857.1 mouse_genomes_project 13 117550408 117556734 + MGP_LPJ_P0038107 Mocs2 protein_coding protein_coding MGP_LPJ_T0036567.1 MGP_LPJ_G0020329.1 mouse_genomes_project 13 29704321 29706974 + MGP_LPJ_P0036567 Foxq1 protein_coding protein_coding MGP_LPJ_T0099026.1 MGP_LPJ_G0037289.1 mouse_genomes_project 13 42262643 42262752 - Gm26064 snRNA snRNA MGP_LPJ_T0038083.1 MGP_LPJ_G0020846.1 mouse_genomes_project 13 115680072 115683015 - MGP_LPJ_P0038083 Gm10735 protein_coding protein_coding MGP_LPJ_T0037251.1 MGP_LPJ_G0020561.1 mouse_genomes_project 13 60925390 60928613 - MGP_LPJ_P0037251 Tpbpb protein_coding protein_coding MGP_LPJ_T0037538.1 MGP_LPJ_G0020688.1 mouse_genomes_project 13 81832800 81845525 + MGP_LPJ_P0037538 Arrdc3 protein_coding protein_coding MGP_LPJ_T0037539.1 MGP_LPJ_G0020688.1 mouse_genomes_project 13 81832873 81839133 + Arrdc3 protein_coding retained_intron MGP_LPJ_T0037540.1 MGP_LPJ_G0020688.1 mouse_genomes_project 13 81832899 81845525 + MGP_LPJ_P0037540 Arrdc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0037541.1 MGP_LPJ_G0020688.1 mouse_genomes_project 13 81839593 81840742 + Arrdc3 protein_coding retained_intron MGP_LPJ_T0037542.1 MGP_LPJ_G0020688.1 mouse_genomes_project 13 81840007 81841132 + Arrdc3 protein_coding retained_intron MGP_LPJ_T0037008.1 MGP_LPJ_G0020487.1 mouse_genomes_project 13 54451047 54458816 - MGP_LPJ_P0037008 Sncb protein_coding protein_coding MGP_LPJ_T0037009.1 MGP_LPJ_G0020487.1 mouse_genomes_project 13 54451567 54458318 - MGP_LPJ_P0037009 Sncb protein_coding protein_coding MGP_LPJ_T0037010.1 MGP_LPJ_G0020487.1 mouse_genomes_project 13 54451614 54455289 - Sncb protein_coding retained_intron MGP_LPJ_T0037011.1 MGP_LPJ_G0020487.1 mouse_genomes_project 13 54457280 54458713 - Sncb protein_coding retained_intron MGP_LPJ_T0036799.1 MGP_LPJ_G0020423.1 mouse_genomes_project 13 45759875 45950695 - MGP_LPJ_P0036799 Kif13a protein_coding protein_coding MGP_LPJ_T0036800.1 MGP_LPJ_G0020423.1 mouse_genomes_project 13 45761394 45950586 - MGP_LPJ_P0036800 Kif13a protein_coding unknown_likely_coding MGP_LPJ_T0036984.1 MGP_LPJ_G0020483.1 mouse_genomes_project 13 54304187 54349876 + MGP_LPJ_P0036984 Faf2 protein_coding protein_coding MGP_LPJ_T0036985.1 MGP_LPJ_G0020483.1 mouse_genomes_project 13 54304207 54324897 + MGP_LPJ_P0036985 Faf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0036986.1 MGP_LPJ_G0020483.1 mouse_genomes_project 13 54304227 54347394 + MGP_LPJ_P0036986 Faf2 protein_coding protein_coding MGP_LPJ_T0036987.1 MGP_LPJ_G0020483.1 mouse_genomes_project 13 54304238 54331785 + MGP_LPJ_P0036987 Faf2 protein_coding protein_coding MGP_LPJ_T0036988.1 MGP_LPJ_G0020483.1 mouse_genomes_project 13 54304238 54331674 + MGP_LPJ_P0036988 Faf2 protein_coding protein_coding MGP_LPJ_T0036989.1 MGP_LPJ_G0020483.1 mouse_genomes_project 13 54304241 54339716 + MGP_LPJ_P0036989 Faf2 protein_coding protein_coding MGP_LPJ_T0036990.1 MGP_LPJ_G0020483.1 mouse_genomes_project 13 54324899 54338878 + MGP_LPJ_P0036990 Faf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0036991.1 MGP_LPJ_G0020483.1 mouse_genomes_project 13 54334797 54338903 + Faf2 protein_coding retained_intron MGP_LPJ_T0037341.1 MGP_LPJ_G0020599.1 mouse_genomes_project 13 67252068 67264399 - MGP_LPJ_P0037341 Mterf3 protein_coding protein_coding MGP_LPJ_T0037342.1 MGP_LPJ_G0020599.1 mouse_genomes_project 13 67259887 67282023 - MGP_LPJ_P0037342 Mterf3 protein_coding protein_coding MGP_LPJ_T0037343.1 MGP_LPJ_G0020599.1 mouse_genomes_project 13 67259895 67282002 - MGP_LPJ_P0037343 Mterf3 protein_coding nonsense_mediated_decay MGP_LPJ_T0037344.1 MGP_LPJ_G0020599.1 mouse_genomes_project 13 67260006 67267431 - Mterf3 protein_coding processed_transcript MGP_LPJ_T0037345.1 MGP_LPJ_G0020599.1 mouse_genomes_project 13 67264811 67281643 - MGP_LPJ_P0037345 Mterf3 protein_coding nonsense_mediated_decay MGP_LPJ_T0037346.1 MGP_LPJ_G0020599.1 mouse_genomes_project 13 67264841 67279263 - MGP_LPJ_P0037346 Mterf3 protein_coding nonsense_mediated_decay MGP_LPJ_T0037347.1 MGP_LPJ_G0020599.1 mouse_genomes_project 13 67271475 67281839 - MGP_LPJ_P0037347 Mterf3 protein_coding protein_coding MGP_LPJ_T0037348.1 MGP_LPJ_G0020599.1 mouse_genomes_project 13 67277311 67279325 - MGP_LPJ_P0037348 Mterf3 protein_coding protein_coding MGP_LPJ_T0037349.1 MGP_LPJ_G0020599.1 mouse_genomes_project 13 67279033 67281973 - MGP_LPJ_P0037349 Mterf3 protein_coding protein_coding MGP_LPJ_T0037350.1 MGP_LPJ_G0020599.1 mouse_genomes_project 13 67280121 67281976 - Mterf3 protein_coding processed_transcript MGP_LPJ_T0036417.1 MGP_LPJ_G0020263.1 mouse_genomes_project 13 21443992 21446959 - MGP_LPJ_P0036417 Hist1h4c protein_coding protein_coding MGP_LPJ_T0037961.1 MGP_LPJ_G0020808.1 mouse_genomes_project 13 106407659 106627501 + MGP_LPJ_P0037961 Adamts6 protein_coding unknown_likely_coding MGP_LPJ_T0036360.1 MGP_LPJ_G0020214.1 mouse_genomes_project 13 19592789 19593265 + MGP_LPJ_P0036360 Hist1h2bj protein_coding protein_coding MGP_LPJ_T0101835.1 MGP_LPJ_G0039872.1 mouse_genomes_project 13 20563862 20564737 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0036321.1 MGP_LPJ_G0020186.1 mouse_genomes_project 13 19092127 19101115 - MGP_LPJ_P0036321 Olfr1364 protein_coding protein_coding MGP_LPJ_T0036322.1 MGP_LPJ_G0020186.1 mouse_genomes_project 13 19092127 19093072 - MGP_LPJ_P0036322 Olfr1364 protein_coding protein_coding MGP_LPJ_T0009976.1 MGP_LPJ_G0008094.1 mouse_genomes_project 13 100377905 100378007 + Gm22698 miRNA miRNA MGP_LPJ_T0036286.1 MGP_LPJ_G0020170.1 mouse_genomes_project 13 18674897 18675866 + Trim27 protein_coding processed_transcript MGP_LPJ_T0036287.1 MGP_LPJ_G0020170.1 mouse_genomes_project 13 18675662 18689956 + MGP_LPJ_P0036287 Trim27 protein_coding protein_coding MGP_LPJ_T0036288.1 MGP_LPJ_G0020170.1 mouse_genomes_project 13 18685300 18685860 + Trim27 protein_coding retained_intron MGP_LPJ_T0036289.1 MGP_LPJ_G0020170.1 mouse_genomes_project 13 18685531 18687915 + MGP_LPJ_P0036289 Trim27 protein_coding nonsense_mediated_decay MGP_LPJ_T0037741.1 MGP_LPJ_G0020740.1 mouse_genomes_project 13 96573578 96825733 - MGP_LPJ_P0037741 Pde8b protein_coding protein_coding MGP_LPJ_T0037742.1 MGP_LPJ_G0020740.1 mouse_genomes_project 13 96573583 96583378 - MGP_LPJ_P0037742 Pde8b protein_coding protein_coding MGP_LPJ_T0037743.1 MGP_LPJ_G0020740.1 mouse_genomes_project 13 96573629 96798426 - MGP_LPJ_P0037743 Pde8b protein_coding protein_coding MGP_LPJ_T0037744.1 MGP_LPJ_G0020740.1 mouse_genomes_project 13 96574454 96595057 - Pde8b protein_coding processed_transcript MGP_LPJ_T0037745.1 MGP_LPJ_G0020740.1 mouse_genomes_project 13 96575227 96825563 - MGP_LPJ_P0037745 Pde8b protein_coding protein_coding MGP_LPJ_T0037746.1 MGP_LPJ_G0020740.1 mouse_genomes_project 13 96575244 96798173 - MGP_LPJ_P0037746 Pde8b protein_coding protein_coding MGP_LPJ_T0037747.1 MGP_LPJ_G0020740.1 mouse_genomes_project 13 96575244 96798173 - MGP_LPJ_P0037747 Pde8b protein_coding protein_coding MGP_LPJ_T0037748.1 MGP_LPJ_G0020740.1 mouse_genomes_project 13 96575244 96798173 - MGP_LPJ_P0037748 Pde8b protein_coding protein_coding MGP_LPJ_T0037749.1 MGP_LPJ_G0020740.1 mouse_genomes_project 13 96583070 96798915 - MGP_LPJ_P0037749 Pde8b protein_coding protein_coding MGP_LPJ_T0037750.1 MGP_LPJ_G0020740.1 mouse_genomes_project 13 96592012 96825671 - MGP_LPJ_P0037750 Pde8b protein_coding protein_coding MGP_LPJ_T0037751.1 MGP_LPJ_G0020740.1 mouse_genomes_project 13 96592458 96604830 - Pde8b protein_coding retained_intron MGP_LPJ_T0037752.1 MGP_LPJ_G0020740.1 mouse_genomes_project 13 96643121 96798426 - Pde8b protein_coding retained_intron MGP_LPJ_T0037753.1 MGP_LPJ_G0020740.1 mouse_genomes_project 13 96653971 96825712 - MGP_LPJ_P0037753 Pde8b protein_coding protein_coding MGP_LPJ_T0037754.1 MGP_LPJ_G0020740.1 mouse_genomes_project 13 96658265 96759491 - Pde8b protein_coding processed_transcript MGP_LPJ_T0012864.1 MGP_LPJ_G0010955.1 mouse_genomes_project 13 18792538 18793009 - processed_pseudogene processed_pseudogene MGP_LPJ_T0037295.1 MGP_LPJ_G0020577.1 mouse_genomes_project 13 64086707 64125129 + MGP_LPJ_P0037295 Ercc6l2 protein_coding protein_coding MGP_LPJ_T0037296.1 MGP_LPJ_G0020577.1 mouse_genomes_project 13 64086769 64146732 + MGP_LPJ_P0037296 Ercc6l2 protein_coding protein_coding MGP_LPJ_T0037297.1 MGP_LPJ_G0020577.1 mouse_genomes_project 13 64086801 64108958 + Ercc6l2 protein_coding processed_transcript MGP_LPJ_T0037298.1 MGP_LPJ_G0020577.1 mouse_genomes_project 13 64086801 64143766 + MGP_LPJ_P0037298 Ercc6l2 protein_coding protein_coding MGP_LPJ_T0037299.1 MGP_LPJ_G0020577.1 mouse_genomes_project 13 64086801 64125094 + MGP_LPJ_P0037299 Ercc6l2 protein_coding protein_coding MGP_LPJ_T0037300.1 MGP_LPJ_G0020577.1 mouse_genomes_project 13 64091068 64143410 + MGP_LPJ_P0037300 Ercc6l2 protein_coding nonsense_mediated_decay MGP_LPJ_T0037301.1 MGP_LPJ_G0020577.1 mouse_genomes_project 13 64091070 64130209 + MGP_LPJ_P0037301 Ercc6l2 protein_coding protein_coding MGP_LPJ_T0037302.1 MGP_LPJ_G0020577.1 mouse_genomes_project 13 64091070 64143787 + MGP_LPJ_P0037302 Ercc6l2 protein_coding protein_coding MGP_LPJ_T0037303.1 MGP_LPJ_G0020577.1 mouse_genomes_project 13 64091393 64113621 + MGP_LPJ_P0037303 Ercc6l2 protein_coding nonsense_mediated_decay MGP_LPJ_T0037304.1 MGP_LPJ_G0020577.1 mouse_genomes_project 13 64144641 64146639 + Ercc6l2 protein_coding processed_transcript MGP_LPJ_T0037305.1 MGP_LPJ_G0020577.1 mouse_genomes_project 13 64146596 64176813 + MGP_LPJ_P0037305 Ercc6l2 protein_coding protein_coding MGP_LPJ_T0012930.1 MGP_LPJ_G0011021.1 mouse_genomes_project 13 75076903 75077242 + processed_pseudogene processed_pseudogene MGP_LPJ_T0036682.1 MGP_LPJ_G0020375.1 mouse_genomes_project 13 36560302 36594066 - MGP_LPJ_P0036682 Cage1 protein_coding protein_coding MGP_LPJ_T0036683.1 MGP_LPJ_G0020375.1 mouse_genomes_project 13 36560304 36594080 - MGP_LPJ_P0036683 Cage1 protein_coding protein_coding MGP_LPJ_T0036684.1 MGP_LPJ_G0020375.1 mouse_genomes_project 13 36578070 36594211 - MGP_LPJ_P0036684 Cage1 protein_coding protein_coding MGP_LPJ_T0036685.1 MGP_LPJ_G0020375.1 mouse_genomes_project 13 36580407 36594080 - MGP_LPJ_P0036685 Cage1 protein_coding protein_coding MGP_LPJ_T0012910.1 MGP_LPJ_G0011001.1 mouse_genomes_project 13 39740490 39744945 + processed_pseudogene processed_pseudogene MGP_LPJ_T0036693.1 MGP_LPJ_G0020380.1 mouse_genomes_project 13 37098252 37126426 - MGP_LPJ_P0036693 Txndc5 protein_coding protein_coding MGP_LPJ_T0036694.1 MGP_LPJ_G0020380.1 mouse_genomes_project 13 37098256 37103924 - Txndc5 protein_coding retained_intron MGP_LPJ_T0036695.1 MGP_LPJ_G0020380.1 mouse_genomes_project 13 37099564 37126920 - MGP_LPJ_P0036695 Txndc5 protein_coding protein_coding MGP_LPJ_T0038144.1 MGP_LPJ_G0020875.1 mouse_genomes_project 13 122628345 122630432 - MGP_LPJ_P0038144 protein_coding protein_coding MGP_LPJ_T0006610.1 MGP_LPJ_G0005480.1 mouse_genomes_project 13 69674409 69680456 + lincRNA lincRNA MGP_LPJ_T0002617.1 MGP_LPJ_G0002512.1 mouse_genomes_project 13 16753603 16754188 - MGP_LPJ_P0002617 Trgv2 TR_V_gene TR_V_gene MGP_LPJ_T0036280.1 MGP_LPJ_G0020165.1 mouse_genomes_project 13 18260899 18506715 + MGP_LPJ_P0036280 Aoah protein_coding protein_coding MGP_LPJ_T0011363.1 MGP_LPJ_G0009481.1 mouse_genomes_project 13 10940335 10940625 + Gm25271 misc_RNA misc_RNA MGP_LPJ_T0009946.1 MGP_LPJ_G0008064.1 mouse_genomes_project 13 47674233 47674322 - Mirlet7f-1 miRNA miRNA MGP_LPJ_T0038119.1 MGP_LPJ_G0020865.1 mouse_genomes_project 13 120497330 120887471 + MGP_LPJ_P0038119 Hcn1 protein_coding protein_coding MGP_LPJ_T0037513.1 MGP_LPJ_G0020681.1 mouse_genomes_project 13 76918442 77002094 + MGP_LPJ_P0037513 Ttc37 protein_coding unknown_likely_coding MGP_LPJ_T0036209.1 MGP_LPJ_G0020141.1 mouse_genomes_project 13 11150344 11188669 - MGP_LPJ_P0036209 Tbce protein_coding nonsense_mediated_decay MGP_LPJ_T0036210.1 MGP_LPJ_G0020141.1 mouse_genomes_project 13 11150346 11157899 - Tbce protein_coding retained_intron MGP_LPJ_T0036211.1 MGP_LPJ_G0020141.1 mouse_genomes_project 13 11150346 11153992 - Tbce protein_coding retained_intron MGP_LPJ_T0036212.1 MGP_LPJ_G0020141.1 mouse_genomes_project 13 11150347 11188728 - MGP_LPJ_P0036212 Tbce protein_coding protein_coding MGP_LPJ_T0036213.1 MGP_LPJ_G0020141.1 mouse_genomes_project 13 11150348 11188728 - MGP_LPJ_P0036213 Tbce protein_coding nonsense_mediated_decay MGP_LPJ_T0036214.1 MGP_LPJ_G0020141.1 mouse_genomes_project 13 11155458 11188711 - Tbce protein_coding retained_intron MGP_LPJ_T0036215.1 MGP_LPJ_G0020141.1 mouse_genomes_project 13 11157583 11162239 - Tbce protein_coding retained_intron MGP_LPJ_T0036216.1 MGP_LPJ_G0020141.1 mouse_genomes_project 13 11157621 11161446 - Tbce protein_coding retained_intron MGP_LPJ_T0036217.1 MGP_LPJ_G0020141.1 mouse_genomes_project 13 11157628 11162232 - Tbce protein_coding retained_intron MGP_LPJ_T0036218.1 MGP_LPJ_G0020141.1 mouse_genomes_project 13 11157636 11161898 - Tbce protein_coding processed_transcript MGP_LPJ_T0036219.1 MGP_LPJ_G0020141.1 mouse_genomes_project 13 11162779 11188702 - Tbce protein_coding retained_intron MGP_LPJ_T0036220.1 MGP_LPJ_G0020141.1 mouse_genomes_project 13 11166746 11188686 - Tbce protein_coding retained_intron MGP_LPJ_T0036221.1 MGP_LPJ_G0020141.1 mouse_genomes_project 13 11171669 11188707 - Tbce protein_coding retained_intron MGP_LPJ_T0036661.1 MGP_LPJ_G0020367.1 mouse_genomes_project 13 34390857 34400915 + Ppp1r3g protein_coding processed_transcript MGP_LPJ_T0036662.1 MGP_LPJ_G0020367.1 mouse_genomes_project 13 34400443 34402979 + MGP_LPJ_P0036662 Ppp1r3g protein_coding protein_coding MGP_LPJ_T0100297.1 MGP_LPJ_G0038560.1 mouse_genomes_project 13 93140479 93140607 + Gm22778 snoRNA snoRNA MGP_LPJ_T0037102.1 MGP_LPJ_G0020511.1 mouse_genomes_project 13 55281503 55313313 - MGP_LPJ_P0037102 Fam193b protein_coding protein_coding MGP_LPJ_T0036992.1 MGP_LPJ_G0020484.1 mouse_genomes_project 13 54366484 54375157 - MGP_LPJ_P0036992 Rnf44 protein_coding protein_coding MGP_LPJ_T0036993.1 MGP_LPJ_G0020484.1 mouse_genomes_project 13 54366487 54380907 - MGP_LPJ_P0036993 Rnf44 protein_coding protein_coding MGP_LPJ_T0036994.1 MGP_LPJ_G0020484.1 mouse_genomes_project 13 54366493 54380976 - MGP_LPJ_P0036994 Rnf44 protein_coding protein_coding MGP_LPJ_T0036995.1 MGP_LPJ_G0020484.1 mouse_genomes_project 13 54366497 54375251 - MGP_LPJ_P0036995 Rnf44 protein_coding protein_coding MGP_LPJ_T0036996.1 MGP_LPJ_G0020484.1 mouse_genomes_project 13 54369728 54371160 - Rnf44 protein_coding retained_intron MGP_LPJ_T0036997.1 MGP_LPJ_G0020484.1 mouse_genomes_project 13 54370133 54380915 - MGP_LPJ_P0036997 Rnf44 protein_coding protein_coding MGP_LPJ_T0036998.1 MGP_LPJ_G0020484.1 mouse_genomes_project 13 54370209 54374731 - MGP_LPJ_P0036998 Rnf44 protein_coding protein_coding MGP_LPJ_T0036999.1 MGP_LPJ_G0020484.1 mouse_genomes_project 13 54370572 54371495 - Rnf44 protein_coding retained_intron MGP_LPJ_T0037000.1 MGP_LPJ_G0020484.1 mouse_genomes_project 13 54370697 54375263 - MGP_LPJ_P0037000 Rnf44 protein_coding protein_coding MGP_LPJ_T0037001.1 MGP_LPJ_G0020484.1 mouse_genomes_project 13 54370793 54375320 - MGP_LPJ_P0037001 Rnf44 protein_coding protein_coding MGP_LPJ_T0037002.1 MGP_LPJ_G0020484.1 mouse_genomes_project 13 54371051 54380881 - MGP_LPJ_P0037002 Rnf44 protein_coding protein_coding MGP_LPJ_T0037003.1 MGP_LPJ_G0020484.1 mouse_genomes_project 13 54371117 54374330 - Rnf44 protein_coding processed_transcript MGP_LPJ_T0037004.1 MGP_LPJ_G0020484.1 mouse_genomes_project 13 54371128 54380919 - Rnf44 protein_coding processed_transcript MGP_LPJ_T0037005.1 MGP_LPJ_G0020484.1 mouse_genomes_project 13 54371137 54375336 - MGP_LPJ_P0037005 Rnf44 protein_coding protein_coding MGP_LPJ_T0100275.1 MGP_LPJ_G0038538.1 mouse_genomes_project 13 43751667 43751786 - Gm22213 snoRNA snoRNA MGP_LPJ_T0006630.1 MGP_LPJ_G0005493.1 mouse_genomes_project 13 92757457 92781208 - A830009L08Rik lincRNA lincRNA MGP_LPJ_T0036401.1 MGP_LPJ_G0020249.1 mouse_genomes_project 13 21294153 21294544 - MGP_LPJ_P0036401 Hist1h4f protein_coding protein_coding MGP_LPJ_T0036455.1 MGP_LPJ_G0020281.1 mouse_genomes_project 13 22151831 22253310 + MGP_LPJ_P0036455 Cmah protein_coding protein_coding MGP_LPJ_T0036456.1 MGP_LPJ_G0020281.1 mouse_genomes_project 13 22174163 22217582 + Cmah protein_coding processed_transcript MGP_LPJ_T0036457.1 MGP_LPJ_G0020281.1 mouse_genomes_project 13 22196517 22217141 + Cmah protein_coding processed_transcript MGP_LPJ_T0036458.1 MGP_LPJ_G0020281.1 mouse_genomes_project 13 22196840 22218551 + Cmah protein_coding processed_transcript MGP_LPJ_T0036951.1 MGP_LPJ_G0020473.1 mouse_genomes_project 13 53718967 53756733 + MGP_LPJ_P0036951 Sfxn1 protein_coding protein_coding MGP_LPJ_T0037813.1 MGP_LPJ_G0020765.1 mouse_genomes_project 13 100052275 100068448 - MGP_LPJ_P0037813 Utp15 protein_coding protein_coding MGP_LPJ_T0011375.1 MGP_LPJ_G0009493.1 mouse_genomes_project 13 93154931 93155239 - Gm24597 misc_RNA misc_RNA MGP_LPJ_T0011379.1 MGP_LPJ_G0009497.1 mouse_genomes_project 13 110881366 110881621 - Gm27572 misc_RNA misc_RNA MGP_LPJ_T0037122.1 MGP_LPJ_G0020521.1 mouse_genomes_project 13 55852787 55917107 - MGP_LPJ_P0037122 H2afy protein_coding protein_coding MGP_LPJ_T0037123.1 MGP_LPJ_G0020521.1 mouse_genomes_project 13 55852787 55917107 - MGP_LPJ_P0037123 H2afy protein_coding protein_coding MGP_LPJ_T0037124.1 MGP_LPJ_G0020521.1 mouse_genomes_project 13 55853338 55865414 - H2afy protein_coding retained_intron MGP_LPJ_T0037125.1 MGP_LPJ_G0020521.1 mouse_genomes_project 13 55853531 55870961 - H2afy protein_coding retained_intron MGP_LPJ_T0037126.1 MGP_LPJ_G0020521.1 mouse_genomes_project 13 55876459 55917006 - H2afy protein_coding processed_transcript MGP_LPJ_T0037127.1 MGP_LPJ_G0020521.1 mouse_genomes_project 13 55882512 55916916 - H2afy protein_coding retained_intron MGP_LPJ_T0037128.1 MGP_LPJ_G0020521.1 mouse_genomes_project 13 55886053 55917836 - H2afy protein_coding processed_transcript MGP_LPJ_T0037129.1 MGP_LPJ_G0020521.1 mouse_genomes_project 13 55886064 55916301 - H2afy protein_coding processed_transcript MGP_LPJ_T0037988.1 MGP_LPJ_G0020818.1 mouse_genomes_project 13 109235916 109299275 - MGP_LPJ_P0037988 Kif2a protein_coding protein_coding MGP_LPJ_T0037989.1 MGP_LPJ_G0020818.1 mouse_genomes_project 13 109238066 109299271 - MGP_LPJ_P0037989 Kif2a protein_coding protein_coding MGP_LPJ_T0037990.1 MGP_LPJ_G0020818.1 mouse_genomes_project 13 109238658 109299283 - MGP_LPJ_P0037990 Kif2a protein_coding protein_coding MGP_LPJ_T0037991.1 MGP_LPJ_G0020818.1 mouse_genomes_project 13 109238927 109273854 - MGP_LPJ_P0037991 Kif2a protein_coding protein_coding MGP_LPJ_T0037992.1 MGP_LPJ_G0020818.1 mouse_genomes_project 13 109240561 109299184 - MGP_LPJ_P0037992 Kif2a protein_coding protein_coding MGP_LPJ_T0037993.1 MGP_LPJ_G0020818.1 mouse_genomes_project 13 109245688 109254062 - MGP_LPJ_P0037993 Kif2a protein_coding nonsense_mediated_decay MGP_LPJ_T0037994.1 MGP_LPJ_G0020818.1 mouse_genomes_project 13 109256843 109298906 - MGP_LPJ_P0037994 Kif2a protein_coding nonsense_mediated_decay MGP_LPJ_T0037995.1 MGP_LPJ_G0020818.1 mouse_genomes_project 13 109264438 109271018 - MGP_LPJ_P0037995 Kif2a protein_coding protein_coding MGP_LPJ_T0011362.1 MGP_LPJ_G0009480.1 mouse_genomes_project 13 9579740 9580004 + Gm24065 misc_RNA misc_RNA MGP_LPJ_T0006646.1 MGP_LPJ_G0005505.1 mouse_genomes_project 13 101291417 101296269 - lincRNA lincRNA MGP_LPJ_T0011359.1 MGP_LPJ_G0009477.1 mouse_genomes_project 13 5846346 5846640 + Gm23553 misc_RNA misc_RNA MGP_LPJ_T0037999.1 MGP_LPJ_G0020822.1 mouse_genomes_project 13 110405492 110518796 - MGP_LPJ_P0037999 Ndufaf2 protein_coding protein_coding MGP_LPJ_T0036551.1 MGP_LPJ_G0020320.1 mouse_genomes_project 13 28240123 28351170 + MGP_LPJ_P0036551 Mboat1 protein_coding protein_coding MGP_LPJ_T0036552.1 MGP_LPJ_G0020320.1 mouse_genomes_project 13 28240156 28335043 + MGP_LPJ_P0036552 Mboat1 protein_coding protein_coding MGP_LPJ_T0036553.1 MGP_LPJ_G0020320.1 mouse_genomes_project 13 28240171 28267147 + Mboat1 protein_coding processed_transcript MGP_LPJ_T0036314.1 MGP_LPJ_G0020182.1 mouse_genomes_project 13 19035018 19052942 - MGP_LPJ_P0036314 Zkscan8 protein_coding protein_coding MGP_LPJ_T0036315.1 MGP_LPJ_G0020182.1 mouse_genomes_project 13 19043627 19052854 - MGP_LPJ_P0036315 Zkscan8 protein_coding protein_coding MGP_LPJ_T0036316.1 MGP_LPJ_G0020182.1 mouse_genomes_project 13 19048245 19052895 - MGP_LPJ_P0036316 Zkscan8 protein_coding protein_coding MGP_LPJ_T0036379.1 MGP_LPJ_G0020233.1 mouse_genomes_project 13 20471175 20472165 - MGP_LPJ_P0036379 Vmn1r211 protein_coding protein_coding MGP_LPJ_T0036929.1 MGP_LPJ_G0020466.1 mouse_genomes_project 13 52405042 52494875 - MGP_LPJ_P0036929 Auh protein_coding nonsense_mediated_decay MGP_LPJ_T0036930.1 MGP_LPJ_G0020466.1 mouse_genomes_project 13 52405042 52505282 - MGP_LPJ_P0036930 Auh protein_coding protein_coding MGP_LPJ_T0036931.1 MGP_LPJ_G0020466.1 mouse_genomes_project 13 52410782 52505079 - MGP_LPJ_P0036931 Auh protein_coding protein_coding MGP_LPJ_T0036932.1 MGP_LPJ_G0020466.1 mouse_genomes_project 13 52460423 52505269 - Auh protein_coding retained_intron MGP_LPJ_T0036933.1 MGP_LPJ_G0020466.1 mouse_genomes_project 13 52469771 52505273 - MGP_LPJ_P0036933 Auh protein_coding protein_coding MGP_LPJ_T0036934.1 MGP_LPJ_G0020466.1 mouse_genomes_project 13 52470547 52499520 - Auh protein_coding processed_transcript MGP_LPJ_T0036935.1 MGP_LPJ_G0020466.1 mouse_genomes_project 13 52480799 52505275 - MGP_LPJ_P0036935 Auh protein_coding protein_coding MGP_LPJ_T0036936.1 MGP_LPJ_G0020466.1 mouse_genomes_project 13 52482649 52499499 - Auh protein_coding processed_transcript MGP_LPJ_T0036937.1 MGP_LPJ_G0020466.1 mouse_genomes_project 13 52482660 52494911 - Auh protein_coding processed_transcript MGP_LPJ_T0036938.1 MGP_LPJ_G0020466.1 mouse_genomes_project 13 52483962 52505302 - MGP_LPJ_P0036938 Auh protein_coding protein_coding MGP_LPJ_T0036939.1 MGP_LPJ_G0020466.1 mouse_genomes_project 13 52487707 52499523 - Auh protein_coding processed_transcript MGP_LPJ_T0036940.1 MGP_LPJ_G0020466.1 mouse_genomes_project 13 52494418 52499515 - Auh protein_coding retained_intron MGP_LPJ_T0036941.1 MGP_LPJ_G0020466.1 mouse_genomes_project 13 52504108 52505273 - Auh protein_coding processed_transcript MGP_LPJ_T0099037.1 MGP_LPJ_G0037300.1 mouse_genomes_project 13 95453159 95453259 + Gm24737 snRNA snRNA MGP_LPJ_T0006642.1 MGP_LPJ_G0005501.1 mouse_genomes_project 13 100239910 100250554 - 2310005E17Rik lincRNA lincRNA MGP_LPJ_T0036582.1 MGP_LPJ_G0020337.1 mouse_genomes_project 13 31097875 31109708 - MGP_LPJ_P0036582 Serpinb1c protein_coding protein_coding MGP_LPJ_T0036583.1 MGP_LPJ_G0020337.1 mouse_genomes_project 13 31100049 31109685 - MGP_LPJ_P0036583 Serpinb1c protein_coding protein_coding MGP_LPJ_T0012866.1 MGP_LPJ_G0010957.1 mouse_genomes_project 13 19011877 19012252 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099018.1 MGP_LPJ_G0037281.1 mouse_genomes_project 13 25792778 25792878 + Gm22476 snRNA snRNA MGP_LPJ_T0099032.1 MGP_LPJ_G0037295.1 mouse_genomes_project 13 60956408 60956507 + Gm24594 snRNA snRNA MGP_LPJ_T0038068.1 MGP_LPJ_G0020837.1 mouse_genomes_project 13 115130576 115191069 - MGP_LPJ_P0038068 Il31ra protein_coding protein_coding MGP_LPJ_T0036923.1 MGP_LPJ_G0020464.1 mouse_genomes_project 13 52056498 52083859 - MGP_LPJ_P0036923 Diras2 protein_coding protein_coding MGP_LPJ_T0099035.1 MGP_LPJ_G0037298.1 mouse_genomes_project 13 81079597 81079725 + Gm24635 snRNA snRNA MGP_LPJ_T0017282.1 MGP_LPJ_G0015159.1 mouse_genomes_project 13 18949868 18955317 + 4930470G03Rik processed_transcript processed_transcript MGP_LPJ_T0036517.1 MGP_LPJ_G0020304.1 mouse_genomes_project 13 25321818 25327791 - MGP_LPJ_P0036517 Prl8a6 protein_coding protein_coding MGP_LPJ_T0036518.1 MGP_LPJ_G0020304.1 mouse_genomes_project 13 25321818 25327751 - MGP_LPJ_P0036518 Prl8a6 protein_coding protein_coding MGP_LPJ_T0036519.1 MGP_LPJ_G0020304.1 mouse_genomes_project 13 25322005 25327700 - MGP_LPJ_P0036519 Prl8a6 protein_coding protein_coding MGP_LPJ_T0098492.1 MGP_LPJ_G0036769.1 mouse_genomes_project 13 63623321 63626972 - Gm16132 sense_intronic sense_intronic MGP_LPJ_T0012882.1 MGP_LPJ_G0010973.1 mouse_genomes_project 13 22064700 22065112 - processed_pseudogene processed_pseudogene MGP_LPJ_T0037463.1 MGP_LPJ_G0020657.1 mouse_genomes_project 13 74630294 74666599 - MGP_LPJ_P0037463 Trip13 protein_coding protein_coding MGP_LPJ_T0012859.1 MGP_LPJ_G0010950.1 mouse_genomes_project 13 8767182 8768171 + processed_pseudogene processed_pseudogene MGP_LPJ_T0036830.1 MGP_LPJ_G0020433.1 mouse_genomes_project 13 47809096 47812606 + MGP_LPJ_P0036830 Barx1 protein_coding protein_coding MGP_LPJ_T0036531.1 MGP_LPJ_G0020312.1 mouse_genomes_project 13 25690181 25698854 - MGP_LPJ_P0036531 Prl7c1 protein_coding protein_coding MGP_LPJ_T0038154.1 MGP_LPJ_G0020883.1 mouse_genomes_project 13 122878426 122878881 + MGP_LPJ_P0038154 protein_coding protein_coding MGP_LPJ_T0037120.1 MGP_LPJ_G0020520.1 mouse_genomes_project 13 55590326 55596697 - MGP_LPJ_P0037120 Pitx1 protein_coding protein_coding MGP_LPJ_T0037121.1 MGP_LPJ_G0020520.1 mouse_genomes_project 13 55593749 55603122 - MGP_LPJ_P0037121 Pitx1 protein_coding protein_coding MGP_LPJ_T0037654.1 MGP_LPJ_G0020709.1 mouse_genomes_project 13 93151740 93199313 + MGP_LPJ_P0037654 Acot12 protein_coding protein_coding MGP_LPJ_T0037655.1 MGP_LPJ_G0020709.1 mouse_genomes_project 13 93151761 93174338 + Acot12 protein_coding retained_intron MGP_LPJ_T0037656.1 MGP_LPJ_G0020709.1 mouse_genomes_project 13 93192502 93198069 + Acot12 protein_coding processed_transcript MGP_LPJ_T0036370.1 MGP_LPJ_G0020224.1 mouse_genomes_project 13 19940898 19942002 + MGP_LPJ_P0036370 Vmn1r199 protein_coding protein_coding MGP_LPJ_T0036655.1 MGP_LPJ_G0020365.1 mouse_genomes_project 13 34074885 34301284 + MGP_LPJ_P0036655 Cdyl protein_coding protein_coding MGP_LPJ_T0036656.1 MGP_LPJ_G0020365.1 mouse_genomes_project 13 34160974 34301278 + MGP_LPJ_P0036656 Cdyl protein_coding protein_coding MGP_LPJ_T0000917.1 MGP_LPJ_G0000845.1 mouse_genomes_project 13 67861228 67863062 + TEC TEC MGP_LPJ_T0037368.1 MGP_LPJ_G0020610.1 mouse_genomes_project 13 67673517 67685610 - MGP_LPJ_P0037368 Zfp457 protein_coding protein_coding MGP_LPJ_T0037369.1 MGP_LPJ_G0020610.1 mouse_genomes_project 13 67684883 67685665 - Zfp457 protein_coding retained_intron MGP_LPJ_T0037334.1 MGP_LPJ_G0020596.1 mouse_genomes_project 13 65590867 65614054 + MGP_LPJ_P0037334 Zfp369 protein_coding protein_coding MGP_LPJ_T0037335.1 MGP_LPJ_G0020596.1 mouse_genomes_project 13 65590867 65610983 + MGP_LPJ_P0037335 Zfp369 protein_coding protein_coding MGP_LPJ_T0037336.1 MGP_LPJ_G0020596.1 mouse_genomes_project 13 65590905 65600688 + Zfp369 protein_coding retained_intron MGP_LPJ_T0037337.1 MGP_LPJ_G0020596.1 mouse_genomes_project 13 65590956 65598171 + MGP_LPJ_P0037337 Zfp369 protein_coding protein_coding MGP_LPJ_T0012898.1 MGP_LPJ_G0010989.1 mouse_genomes_project 13 28218704 28218827 + processed_pseudogene processed_pseudogene MGP_LPJ_T0037564.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84584510 84746381 + MGP_LPJ_P0037564 Mef2c protein_coding protein_coding MGP_LPJ_T0037565.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84584682 84746724 + MGP_LPJ_P0037565 Mef2c protein_coding protein_coding MGP_LPJ_T0037566.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84584716 84750116 + MGP_LPJ_P0037566 Mef2c protein_coding protein_coding MGP_LPJ_T0037567.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84584716 84750116 + MGP_LPJ_P0037567 Mef2c protein_coding protein_coding MGP_LPJ_T0037568.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84584716 84674744 + MGP_LPJ_P0037568 Mef2c protein_coding protein_coding MGP_LPJ_T0037569.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84584716 84674678 + MGP_LPJ_P0037569 Mef2c protein_coding protein_coding MGP_LPJ_T0037570.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84605176 84708497 + MGP_LPJ_P0037570 Mef2c protein_coding protein_coding MGP_LPJ_T0037571.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84605996 84716239 + MGP_LPJ_P0037571 Mef2c protein_coding protein_coding MGP_LPJ_T0037572.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84606502 84611055 + Mef2c protein_coding retained_intron MGP_LPJ_T0037573.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84606559 84747496 + MGP_LPJ_P0037573 Mef2c protein_coding protein_coding MGP_LPJ_T0037574.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84606560 84708639 + MGP_LPJ_P0037574 Mef2c protein_coding protein_coding MGP_LPJ_T0037575.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84606566 84746731 + MGP_LPJ_P0037575 Mef2c protein_coding protein_coding MGP_LPJ_T0037576.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84606596 84735953 + MGP_LPJ_P0037576 Mef2c protein_coding protein_coding MGP_LPJ_T0037577.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84606625 84716991 + Mef2c protein_coding retained_intron MGP_LPJ_T0037578.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84611843 84708488 + MGP_LPJ_P0037578 Mef2c protein_coding protein_coding MGP_LPJ_T0037579.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84654277 84718557 + MGP_LPJ_P0037579 Mef2c protein_coding protein_coding MGP_LPJ_T0037580.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84654310 84708676 + MGP_LPJ_P0037580 Mef2c protein_coding protein_coding MGP_LPJ_T0037581.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84655536 84750118 + MGP_LPJ_P0037581 Mef2c protein_coding protein_coding MGP_LPJ_T0037582.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84655547 84660339 + Mef2c protein_coding retained_intron MGP_LPJ_T0037583.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84655551 84747511 + MGP_LPJ_P0037583 Mef2c protein_coding protein_coding MGP_LPJ_T0037584.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84655554 84716340 + MGP_LPJ_P0037584 Mef2c protein_coding protein_coding MGP_LPJ_T0037585.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84657074 84735906 + MGP_LPJ_P0037585 Mef2c protein_coding protein_coding MGP_LPJ_T0037586.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84657139 84716265 + MGP_LPJ_P0037586 Mef2c protein_coding protein_coding MGP_LPJ_T0037587.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84657606 84745669 + MGP_LPJ_P0037587 Mef2c protein_coding protein_coding MGP_LPJ_T0037588.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84657606 84750118 + MGP_LPJ_P0037588 Mef2c protein_coding protein_coding MGP_LPJ_T0037589.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84657606 84745669 + MGP_LPJ_P0037589 Mef2c protein_coding protein_coding MGP_LPJ_T0037590.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84708706 84745774 + MGP_LPJ_P0037590 Mef2c protein_coding protein_coding MGP_LPJ_T0037591.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84716164 84738592 + MGP_LPJ_P0037591 Mef2c protein_coding nonsense_mediated_decay MGP_LPJ_T0037592.1 MGP_LPJ_G0020694.1 mouse_genomes_project 13 84735930 84745777 + MGP_LPJ_P0037592 Mef2c protein_coding protein_coding MGP_LPJ_T0036809.1 MGP_LPJ_G0020426.1 mouse_genomes_project 13 46075097 46086704 + MGP_LPJ_P0036809 Kdm1b protein_coding protein_coding MGP_LPJ_T0036810.1 MGP_LPJ_G0020426.1 mouse_genomes_project 13 46075176 46115909 + MGP_LPJ_P0036810 Kdm1b protein_coding protein_coding MGP_LPJ_T0036811.1 MGP_LPJ_G0020426.1 mouse_genomes_project 13 46097091 46105234 + Kdm1b protein_coding retained_intron MGP_LPJ_T0036812.1 MGP_LPJ_G0020426.1 mouse_genomes_project 13 46099406 46117561 + Kdm1b protein_coding processed_transcript MGP_LPJ_T0003469.1 MGP_LPJ_G0003182.1 mouse_genomes_project 13 48035884 48040286 + Phf2os1 antisense antisense MGP_LPJ_T0036777.1 MGP_LPJ_G0020412.1 mouse_genomes_project 13 43838266 43926661 - MGP_LPJ_P0036777 Dtnbp1 protein_coding protein_coding MGP_LPJ_T0036778.1 MGP_LPJ_G0020412.1 mouse_genomes_project 13 43838272 43926661 - MGP_LPJ_P0036778 Dtnbp1 protein_coding protein_coding MGP_LPJ_T0036361.1 MGP_LPJ_G0020215.1 mouse_genomes_project 13 19643030 19644002 + MGP_LPJ_P0036361 Vmn1r222 protein_coding protein_coding MGP_LPJ_T0099016.1 MGP_LPJ_G0037279.1 mouse_genomes_project 13 21407468 21407572 + Gm22452 snRNA snRNA MGP_LPJ_T0003514.1 MGP_LPJ_G0003205.1 mouse_genomes_project 13 96783140 96783540 + antisense antisense MGP_LPJ_T0100276.1 MGP_LPJ_G0038539.1 mouse_genomes_project 13 45778265 45778395 - Gm24620 snoRNA snoRNA MGP_LPJ_T0037189.1 MGP_LPJ_G0020542.1 mouse_genomes_project 13 58314542 58323075 + MGP_LPJ_P0037189 Rmi1 protein_coding protein_coding MGP_LPJ_T0037142.1 MGP_LPJ_G0020531.1 mouse_genomes_project 13 56522605 56554801 + MGP_LPJ_P0037142 Smad5 protein_coding protein_coding MGP_LPJ_T0037143.1 MGP_LPJ_G0020531.1 mouse_genomes_project 13 56522634 56545659 + Smad5 protein_coding processed_transcript MGP_LPJ_T0037144.1 MGP_LPJ_G0020531.1 mouse_genomes_project 13 56522647 56552384 + MGP_LPJ_P0037144 Smad5 protein_coding protein_coding MGP_LPJ_T0037145.1 MGP_LPJ_G0020531.1 mouse_genomes_project 13 56522661 56545570 + Smad5 protein_coding processed_transcript MGP_LPJ_T0037146.1 MGP_LPJ_G0020531.1 mouse_genomes_project 13 56523259 56552728 + MGP_LPJ_P0037146 Smad5 protein_coding protein_coding MGP_LPJ_T0037147.1 MGP_LPJ_G0020531.1 mouse_genomes_project 13 56545461 56551418 + Smad5 protein_coding processed_transcript MGP_LPJ_T0036073.1 MGP_LPJ_G0020094.1 mouse_genomes_project 13 77071 114036 + MGP_LPJ_P0036073 Gdi2 protein_coding protein_coding MGP_LPJ_T0036422.1 MGP_LPJ_G0020266.1 mouse_genomes_project 13 21498641 21499100 + MGP_LPJ_P0036422 Hist1h2bb protein_coding protein_coding MGP_LPJ_T0036377.1 MGP_LPJ_G0020231.1 mouse_genomes_project 13 20239577 20240572 - MGP_LPJ_P0036377 protein_coding protein_coding MGP_LPJ_T0037819.1 MGP_LPJ_G0020767.1 mouse_genomes_project 13 100085778 100114128 + MGP_LPJ_P0037819 Gm21976 protein_coding nonsense_mediated_decay MGP_LPJ_T0037820.1 MGP_LPJ_G0020767.1 mouse_genomes_project 13 100085783 100100889 + MGP_LPJ_P0037820 Gm21976 protein_coding protein_coding MGP_LPJ_T0037821.1 MGP_LPJ_G0020767.1 mouse_genomes_project 13 100085829 100114128 + MGP_LPJ_P0037821 Gm21976 protein_coding protein_coding MGP_LPJ_T0037822.1 MGP_LPJ_G0020767.1 mouse_genomes_project 13 100109534 100114066 + MGP_LPJ_P0037822 Gm21976 protein_coding protein_coding MGP_LPJ_T0036735.1 MGP_LPJ_G0020402.1 mouse_genomes_project 13 41483453 41967059 + MGP_LPJ_P0036735 Phactr1 protein_coding protein_coding MGP_LPJ_T0036736.1 MGP_LPJ_G0020402.1 mouse_genomes_project 13 41483629 41769742 + Phactr1 protein_coding retained_intron MGP_LPJ_T0036737.1 MGP_LPJ_G0020402.1 mouse_genomes_project 13 41484343 41963783 + MGP_LPJ_P0036737 Phactr1 protein_coding protein_coding MGP_LPJ_T0036738.1 MGP_LPJ_G0020402.1 mouse_genomes_project 13 41485528 41963727 + MGP_LPJ_P0036738 Phactr1 protein_coding protein_coding MGP_LPJ_T0036739.1 MGP_LPJ_G0020402.1 mouse_genomes_project 13 41514039 41963931 + MGP_LPJ_P0036739 Phactr1 protein_coding protein_coding MGP_LPJ_T0036740.1 MGP_LPJ_G0020402.1 mouse_genomes_project 13 41514077 41967061 + MGP_LPJ_P0036740 Phactr1 protein_coding protein_coding MGP_LPJ_T0036741.1 MGP_LPJ_G0020402.1 mouse_genomes_project 13 41676243 41963842 + MGP_LPJ_P0036741 Phactr1 protein_coding protein_coding MGP_LPJ_T0036742.1 MGP_LPJ_G0020402.1 mouse_genomes_project 13 41676830 41767486 + Phactr1 protein_coding processed_transcript MGP_LPJ_T0036743.1 MGP_LPJ_G0020402.1 mouse_genomes_project 13 41940731 41963913 + Phactr1 protein_coding processed_transcript MGP_LPJ_T0036744.1 MGP_LPJ_G0020402.1 mouse_genomes_project 13 41951341 41963941 + Phactr1 protein_coding processed_transcript MGP_LPJ_T0036745.1 MGP_LPJ_G0020402.1 mouse_genomes_project 13 41951356 41963893 + Phactr1 protein_coding processed_transcript MGP_LPJ_T0036746.1 MGP_LPJ_G0020402.1 mouse_genomes_project 13 41954338 41963787 + Phactr1 protein_coding processed_transcript MGP_LPJ_T0036747.1 MGP_LPJ_G0020402.1 mouse_genomes_project 13 41954338 41963787 + Phactr1 protein_coding processed_transcript MGP_LPJ_T0036748.1 MGP_LPJ_G0020402.1 mouse_genomes_project 13 41954370 41963787 + Phactr1 protein_coding processed_transcript MGP_LPJ_T0036749.1 MGP_LPJ_G0020402.1 mouse_genomes_project 13 41961533 41962777 + Phactr1 protein_coding processed_transcript MGP_LPJ_T0036750.1 MGP_LPJ_G0020402.1 mouse_genomes_project 13 41963913 41967047 + Phactr1 protein_coding processed_transcript MGP_LPJ_T0003515.1 MGP_LPJ_G0003206.1 mouse_genomes_project 13 100123395 100124278 + Gm9828 antisense antisense MGP_LPJ_T0003516.1 MGP_LPJ_G0003206.1 mouse_genomes_project 13 100124042 100129946 + Gm9828 antisense antisense MGP_LPJ_T0003517.1 MGP_LPJ_G0003206.1 mouse_genomes_project 13 100124089 100133561 + Gm9828 antisense antisense MGP_LPJ_T0003518.1 MGP_LPJ_G0003206.1 mouse_genomes_project 13 100126612 100129452 + Gm9828 antisense antisense MGP_LPJ_T0036344.1 MGP_LPJ_G0020207.1 mouse_genomes_project 13 19482563 19498173 + MGP_LPJ_P0036344 Zfp184 protein_coding protein_coding MGP_LPJ_T0036345.1 MGP_LPJ_G0020207.1 mouse_genomes_project 13 19482581 19498456 + MGP_LPJ_P0036345 Zfp184 protein_coding protein_coding MGP_LPJ_T0036346.1 MGP_LPJ_G0020207.1 mouse_genomes_project 13 19482581 19498291 + MGP_LPJ_P0036346 Zfp184 protein_coding nonsense_mediated_decay MGP_LPJ_T0036347.1 MGP_LPJ_G0020207.1 mouse_genomes_project 13 19482606 19487814 + MGP_LPJ_P0036347 Zfp184 protein_coding protein_coding MGP_LPJ_T0036348.1 MGP_LPJ_G0020207.1 mouse_genomes_project 13 19483262 19498027 + MGP_LPJ_P0036348 Zfp184 protein_coding protein_coding MGP_LPJ_T0036349.1 MGP_LPJ_G0020207.1 mouse_genomes_project 13 19486878 19496399 + Zfp184 protein_coding retained_intron MGP_LPJ_T0037268.1 MGP_LPJ_G0020574.1 mouse_genomes_project 13 63248029 63536559 + MGP_LPJ_P0037268 2010111I01Rik protein_coding protein_coding MGP_LPJ_T0037269.1 MGP_LPJ_G0020574.1 mouse_genomes_project 13 63248262 63539187 + MGP_LPJ_P0037269 2010111I01Rik protein_coding protein_coding MGP_LPJ_T0037270.1 MGP_LPJ_G0020574.1 mouse_genomes_project 13 63517464 63563000 + MGP_LPJ_P0037270 2010111I01Rik protein_coding protein_coding MGP_LPJ_T0006580.1 MGP_LPJ_G0005461.1 mouse_genomes_project 13 47050280 47116814 - 4931429P17Rik lincRNA lincRNA MGP_LPJ_T0037936.1 MGP_LPJ_G0020800.1 mouse_genomes_project 13 105845462 105868422 - MGP_LPJ_P0037936 Srek1 protein_coding protein_coding MGP_LPJ_T0037937.1 MGP_LPJ_G0020800.1 mouse_genomes_project 13 105856186 105868249 - MGP_LPJ_P0037937 Srek1 protein_coding unknown_likely_coding MGP_LPJ_T0036097.1 MGP_LPJ_G0020108.1 mouse_genomes_project 13 1009586 1032811 + MGP_LPJ_P0036097 Akr1c6 protein_coding protein_coding MGP_LPJ_T0036098.1 MGP_LPJ_G0020108.1 mouse_genomes_project 13 1009712 1010327 + Akr1c6 protein_coding processed_transcript MGP_LPJ_T0036099.1 MGP_LPJ_G0020108.1 mouse_genomes_project 13 1011425 1022649 + MGP_LPJ_P0036099 Akr1c6 protein_coding protein_coding MGP_LPJ_T0002512.1 MGP_LPJ_G0002418.1 mouse_genomes_project 13 16664839 16666965 + MGP_LPJ_P0002512 TR_C_gene TR_C_gene MGP_LPJ_T0036412.1 MGP_LPJ_G0020258.1 mouse_genomes_project 13 21370395 21372350 - MGP_LPJ_P0036412 Hist1h1e protein_coding protein_coding MGP_LPJ_T0036146.1 MGP_LPJ_G0020120.1 mouse_genomes_project 13 5619917 5625436 + MGP_LPJ_P0036146 protein_coding protein_coding MGP_LPJ_T0036147.1 MGP_LPJ_G0020120.1 mouse_genomes_project 13 5619967 5628186 + MGP_LPJ_P0036147 protein_coding protein_coding MGP_LPJ_T0036148.1 MGP_LPJ_G0020120.1 mouse_genomes_project 13 5621043 5625332 + protein_coding retained_intron MGP_LPJ_T0100262.1 MGP_LPJ_G0038525.1 mouse_genomes_project 13 5671402 5671516 + snoRNA snoRNA MGP_LPJ_T0009957.1 MGP_LPJ_G0008075.1 mouse_genomes_project 13 60303961 60304060 + Gm24999 miRNA miRNA MGP_LPJ_T0037376.1 MGP_LPJ_G0020613.1 mouse_genomes_project 13 67719246 67738546 - MGP_LPJ_P0037376 Zfp953 protein_coding protein_coding MGP_LPJ_T0003485.1 MGP_LPJ_G0003191.1 mouse_genomes_project 13 67419287 68214568 + antisense antisense MGP_LPJ_T0003487.1 MGP_LPJ_G0003191.1 mouse_genomes_project 13 68184510 68223476 + antisense antisense MGP_LPJ_T0003488.1 MGP_LPJ_G0003191.1 mouse_genomes_project 13 68199752 68224601 + antisense antisense MGP_LPJ_T0006638.1 MGP_LPJ_G0005499.1 mouse_genomes_project 13 99464738 99478871 - 5330416C01Rik lincRNA lincRNA MGP_LPJ_T0006639.1 MGP_LPJ_G0005499.1 mouse_genomes_project 13 99466575 99474566 - 5330416C01Rik lincRNA lincRNA MGP_LPJ_T0006640.1 MGP_LPJ_G0005499.1 mouse_genomes_project 13 99476153 99478839 - 5330416C01Rik lincRNA lincRNA MGP_LPJ_T0012933.1 MGP_LPJ_G0011024.1 mouse_genomes_project 13 77766276 77766945 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000936.1 MGP_LPJ_G0000864.1 mouse_genomes_project 13 116936871 116949433 + TEC TEC MGP_LPJ_T0037918.1 MGP_LPJ_G0020799.1 mouse_genomes_project 13 104807090 105435518 - MGP_LPJ_P0037918 Mast4 protein_coding protein_coding MGP_LPJ_T0037919.1 MGP_LPJ_G0020799.1 mouse_genomes_project 13 104807095 105435786 - MGP_LPJ_P0037919 Mast4 protein_coding protein_coding MGP_LPJ_T0037920.1 MGP_LPJ_G0020799.1 mouse_genomes_project 13 104809395 105187678 - MGP_LPJ_P0037920 Mast4 protein_coding protein_coding MGP_LPJ_T0037921.1 MGP_LPJ_G0020799.1 mouse_genomes_project 13 104809614 105035735 - MGP_LPJ_P0037921 Mast4 protein_coding protein_coding MGP_LPJ_T0037922.1 MGP_LPJ_G0020799.1 mouse_genomes_project 13 104809614 104981875 - MGP_LPJ_P0037922 Mast4 protein_coding protein_coding MGP_LPJ_T0037923.1 MGP_LPJ_G0020799.1 mouse_genomes_project 13 104816581 104981552 - MGP_LPJ_P0037923 Mast4 protein_coding protein_coding MGP_LPJ_T0037924.1 MGP_LPJ_G0020799.1 mouse_genomes_project 13 104830312 105035619 - MGP_LPJ_P0037924 Mast4 protein_coding protein_coding MGP_LPJ_T0037925.1 MGP_LPJ_G0020799.1 mouse_genomes_project 13 104844534 104848795 - Mast4 protein_coding retained_intron MGP_LPJ_T0037926.1 MGP_LPJ_G0020799.1 mouse_genomes_project 13 104855542 104859777 - Mast4 protein_coding retained_intron MGP_LPJ_T0037927.1 MGP_LPJ_G0020799.1 mouse_genomes_project 13 104873083 105187661 - MGP_LPJ_P0037927 Mast4 protein_coding protein_coding MGP_LPJ_T0037928.1 MGP_LPJ_G0020799.1 mouse_genomes_project 13 104875862 104879874 - Mast4 protein_coding retained_intron MGP_LPJ_T0037929.1 MGP_LPJ_G0020799.1 mouse_genomes_project 13 104925649 105435786 - MGP_LPJ_P0037929 Mast4 protein_coding protein_coding MGP_LPJ_T0037930.1 MGP_LPJ_G0020799.1 mouse_genomes_project 13 104926805 104981844 - Mast4 protein_coding retained_intron MGP_LPJ_T0037931.1 MGP_LPJ_G0020799.1 mouse_genomes_project 13 105106468 105435788 - Mast4 protein_coding retained_intron MGP_LPJ_T0037932.1 MGP_LPJ_G0020799.1 mouse_genomes_project 13 105142962 105435823 - Mast4 protein_coding processed_transcript MGP_LPJ_T0037933.1 MGP_LPJ_G0020799.1 mouse_genomes_project 13 105157814 105435777 - Mast4 protein_coding processed_transcript MGP_LPJ_T0037934.1 MGP_LPJ_G0020799.1 mouse_genomes_project 13 105185010 105187677 - Mast4 protein_coding retained_intron MGP_LPJ_T0037935.1 MGP_LPJ_G0020799.1 mouse_genomes_project 13 105434297 105435818 - Mast4 protein_coding retained_intron MGP_LPJ_T0011366.1 MGP_LPJ_G0009484.1 mouse_genomes_project 13 37531019 37531247 - Gm22035 misc_RNA misc_RNA MGP_LPJ_T0037061.1 MGP_LPJ_G0020496.1 mouse_genomes_project 13 54936979 55051032 + MGP_LPJ_P0037061 Nsd1 protein_coding unknown_likely_coding MGP_LPJ_T0038143.1 MGP_LPJ_G0020874.1 mouse_genomes_project 13 122483145 122599510 + MGP_LPJ_P0038143 protein_coding protein_coding MGP_LPJ_T0100263.1 MGP_LPJ_G0038526.1 mouse_genomes_project 13 5686288 5686532 - snoRNA snoRNA MGP_LPJ_T0036943.1 MGP_LPJ_G0020468.1 mouse_genomes_project 13 52693265 52880857 - MGP_LPJ_P0036943 Ror2 protein_coding protein_coding MGP_LPJ_T0036944.1 MGP_LPJ_G0020468.1 mouse_genomes_project 13 52693270 52881432 - MGP_LPJ_P0036944 Ror2 protein_coding protein_coding MGP_LPJ_T0036945.1 MGP_LPJ_G0020468.1 mouse_genomes_project 13 52716254 52869761 - Ror2 protein_coding processed_transcript MGP_LPJ_T0101843.1 MGP_LPJ_G0039880.1 mouse_genomes_project 13 20855773 20857942 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0037101.1 MGP_LPJ_G0020510.1 mouse_genomes_project 13 55272827 55278843 - MGP_LPJ_P0037101 Ddx41 protein_coding protein_coding MGP_LPJ_T0037409.1 MGP_LPJ_G0020634.1 mouse_genomes_project 13 69131444 69542130 - MGP_LPJ_P0037409 Adcy2 protein_coding protein_coding MGP_LPJ_T0012940.1 MGP_LPJ_G0011031.1 mouse_genomes_project 13 89429739 89430535 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101827.1 MGP_LPJ_G0039864.1 mouse_genomes_project 13 20046715 20047295 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0006648.1 MGP_LPJ_G0005507.1 mouse_genomes_project 13 102843026 102980508 + Gm29502 lincRNA lincRNA MGP_LPJ_T0036472.1 MGP_LPJ_G0020283.1 mouse_genomes_project 13 22548655 22558726 - MGP_LPJ_P0036472 Gmnn protein_coding protein_coding MGP_LPJ_T0036473.1 MGP_LPJ_G0020283.1 mouse_genomes_project 13 22548655 22558664 - MGP_LPJ_P0036473 Gmnn protein_coding protein_coding MGP_LPJ_T0036474.1 MGP_LPJ_G0020283.1 mouse_genomes_project 13 22548901 22558279 - MGP_LPJ_P0036474 Gmnn protein_coding protein_coding MGP_LPJ_T0036475.1 MGP_LPJ_G0020283.1 mouse_genomes_project 13 22548998 22558243 - MGP_LPJ_P0036475 Gmnn protein_coding protein_coding MGP_LPJ_T0036476.1 MGP_LPJ_G0020283.1 mouse_genomes_project 13 22550504 22558700 - MGP_LPJ_P0036476 Gmnn protein_coding nonsense_mediated_decay MGP_LPJ_T0037475.1 MGP_LPJ_G0020664.1 mouse_genomes_project 13 74898543 74939787 - MGP_LPJ_P0037475 Exoc3 protein_coding protein_coding MGP_LPJ_T0017289.1 MGP_LPJ_G0015166.1 mouse_genomes_project 13 26500823 26551438 - processed_transcript processed_transcript MGP_LPJ_T0017290.1 MGP_LPJ_G0015166.1 mouse_genomes_project 13 26501567 26940016 - processed_transcript processed_transcript MGP_LPJ_T0017291.1 MGP_LPJ_G0015166.1 mouse_genomes_project 13 26501567 26515279 - processed_transcript processed_transcript MGP_LPJ_T0017292.1 MGP_LPJ_G0015166.1 mouse_genomes_project 13 26501730 26547114 - processed_transcript processed_transcript MGP_LPJ_T0017293.1 MGP_LPJ_G0015166.1 mouse_genomes_project 13 26536342 26547273 - processed_transcript processed_transcript MGP_LPJ_T0017294.1 MGP_LPJ_G0015166.1 mouse_genomes_project 13 26595688 26937392 - processed_transcript processed_transcript MGP_LPJ_T0017295.1 MGP_LPJ_G0015166.1 mouse_genomes_project 13 26708572 26939280 - processed_transcript processed_transcript MGP_LPJ_T0000926.1 MGP_LPJ_G0000854.1 mouse_genomes_project 13 91994000 91994413 + TEC TEC MGP_LPJ_T0037906.1 MGP_LPJ_G0020797.1 mouse_genomes_project 13 103719273 103812599 - MGP_LPJ_P0037906 Pik3r1 protein_coding protein_coding MGP_LPJ_T0037907.1 MGP_LPJ_G0020797.1 mouse_genomes_project 13 103722374 103732686 - MGP_LPJ_P0037907 Pik3r1 protein_coding protein_coding MGP_LPJ_T0037908.1 MGP_LPJ_G0020797.1 mouse_genomes_project 13 103726283 103732632 - MGP_LPJ_P0037908 Pik3r1 protein_coding protein_coding MGP_LPJ_T0037909.1 MGP_LPJ_G0020797.1 mouse_genomes_project 13 103727741 103734656 - MGP_LPJ_P0037909 Pik3r1 protein_coding protein_coding MGP_LPJ_T0037910.1 MGP_LPJ_G0020797.1 mouse_genomes_project 13 103730190 103732399 - Pik3r1 protein_coding retained_intron MGP_LPJ_T0037911.1 MGP_LPJ_G0020797.1 mouse_genomes_project 13 103741504 103742160 - Pik3r1 protein_coding retained_intron MGP_LPJ_T0037912.1 MGP_LPJ_G0020797.1 mouse_genomes_project 13 103797753 103812595 - Pik3r1 protein_coding retained_intron MGP_LPJ_T0037262.1 MGP_LPJ_G0020570.1 mouse_genomes_project 13 61556047 61561400 - MGP_LPJ_P0037262 Ctsm protein_coding protein_coding MGP_LPJ_T0099038.1 MGP_LPJ_G0037301.1 mouse_genomes_project 13 97515348 97515507 - Gm24032 snRNA snRNA MGP_LPJ_T0036537.1 MGP_LPJ_G0020318.1 mouse_genomes_project 13 27265074 27956730 - MGP_LPJ_P0036537 Cdkal1 protein_coding nonsense_mediated_decay MGP_LPJ_T0036538.1 MGP_LPJ_G0020318.1 mouse_genomes_project 13 27407534 27956757 - MGP_LPJ_P0036538 Cdkal1 protein_coding protein_coding MGP_LPJ_T0036539.1 MGP_LPJ_G0020318.1 mouse_genomes_project 13 27408270 27956726 - MGP_LPJ_P0036539 Cdkal1 protein_coding unknown_likely_coding MGP_LPJ_T0036540.1 MGP_LPJ_G0020318.1 mouse_genomes_project 13 27484888 27555440 - MGP_LPJ_P0036540 Cdkal1 protein_coding protein_coding MGP_LPJ_T0036541.1 MGP_LPJ_G0020318.1 mouse_genomes_project 13 27524609 27600851 - MGP_LPJ_P0036541 Cdkal1 protein_coding protein_coding MGP_LPJ_T0036542.1 MGP_LPJ_G0020318.1 mouse_genomes_project 13 27554700 27956726 - Cdkal1 protein_coding retained_intron MGP_LPJ_T0036543.1 MGP_LPJ_G0020318.1 mouse_genomes_project 13 27597603 27956726 - Cdkal1 protein_coding retained_intron MGP_LPJ_T0036544.1 MGP_LPJ_G0020318.1 mouse_genomes_project 13 27605209 27956722 - MGP_LPJ_P0036544 Cdkal1 protein_coding nonsense_mediated_decay MGP_LPJ_T0036545.1 MGP_LPJ_G0020318.1 mouse_genomes_project 13 27794342 27956740 - Cdkal1 protein_coding retained_intron MGP_LPJ_T0036546.1 MGP_LPJ_G0020318.1 mouse_genomes_project 13 27873627 27956514 - MGP_LPJ_P0036546 Cdkal1 protein_coding protein_coding MGP_LPJ_T0036547.1 MGP_LPJ_G0020318.1 mouse_genomes_project 13 27899499 27956746 - MGP_LPJ_P0036547 Cdkal1 protein_coding protein_coding MGP_LPJ_T0036548.1 MGP_LPJ_G0020318.1 mouse_genomes_project 13 27935623 27956748 - MGP_LPJ_P0036548 Cdkal1 protein_coding nonsense_mediated_decay MGP_LPJ_T0037719.1 MGP_LPJ_G0020732.1 mouse_genomes_project 13 95265074 95440992 + MGP_LPJ_P0037719 Arsb protein_coding protein_coding MGP_LPJ_T0006566.1 MGP_LPJ_G0005450.1 mouse_genomes_project 13 35965356 35967084 - Gm29459 lincRNA lincRNA MGP_LPJ_T0009935.1 MGP_LPJ_G0008053.1 mouse_genomes_project 13 19459524 19459613 - Gm44456 miRNA miRNA MGP_LPJ_T0100261.1 MGP_LPJ_G0038524.1 mouse_genomes_project 13 5671402 5671644 + snoRNA snoRNA MGP_LPJ_T0036160.1 MGP_LPJ_G0020125.1 mouse_genomes_project 13 6015796 6424283 + MGP_LPJ_P0036160 Dip2c protein_coding protein_coding MGP_LPJ_T0036161.1 MGP_LPJ_G0020125.1 mouse_genomes_project 13 6016201 6421536 + MGP_LPJ_P0036161 Dip2c protein_coding protein_coding MGP_LPJ_T0036162.1 MGP_LPJ_G0020125.1 mouse_genomes_project 13 6016250 6421536 + MGP_LPJ_P0036162 Dip2c protein_coding protein_coding MGP_LPJ_T0037756.1 MGP_LPJ_G0020742.1 mouse_genomes_project 13 96930816 96955487 - MGP_LPJ_P0037756 Aggf1 protein_coding protein_coding MGP_LPJ_T0037757.1 MGP_LPJ_G0020742.1 mouse_genomes_project 13 96933635 96955469 - Aggf1 protein_coding processed_transcript MGP_LPJ_T0009968.1 MGP_LPJ_G0008086.1 mouse_genomes_project 13 84836409 84836481 + Mir9-2 miRNA miRNA MGP_LPJ_T0012862.1 MGP_LPJ_G0010953.1 mouse_genomes_project 13 16834673 16835122 + processed_pseudogene processed_pseudogene MGP_LPJ_T0036281.1 MGP_LPJ_G0020166.1 mouse_genomes_project 13 18557072 18558023 - MGP_LPJ_P0036281 Olfr1370 protein_coding protein_coding MGP_LPJ_T0037977.1 MGP_LPJ_G0020816.1 mouse_genomes_project 13 109046243 109212046 - MGP_LPJ_P0037977 Ipo11 protein_coding protein_coding MGP_LPJ_T0037978.1 MGP_LPJ_G0020816.1 mouse_genomes_project 13 109046243 109195762 - MGP_LPJ_P0037978 Ipo11 protein_coding protein_coding MGP_LPJ_T0037979.1 MGP_LPJ_G0020816.1 mouse_genomes_project 13 109046251 109099058 - MGP_LPJ_P0037979 Ipo11 protein_coding nonsense_mediated_decay MGP_LPJ_T0037980.1 MGP_LPJ_G0020816.1 mouse_genomes_project 13 109063008 109114391 - Ipo11 protein_coding retained_intron MGP_LPJ_T0037981.1 MGP_LPJ_G0020816.1 mouse_genomes_project 13 109063113 109087683 - Ipo11 protein_coding retained_intron MGP_LPJ_T0037982.1 MGP_LPJ_G0020816.1 mouse_genomes_project 13 109085075 109098893 - Ipo11 protein_coding processed_transcript MGP_LPJ_T0037983.1 MGP_LPJ_G0020816.1 mouse_genomes_project 13 109085077 109087671 - Ipo11 protein_coding processed_transcript MGP_LPJ_T0037984.1 MGP_LPJ_G0020816.1 mouse_genomes_project 13 109093714 109100094 - Ipo11 protein_coding retained_intron MGP_LPJ_T0037985.1 MGP_LPJ_G0020816.1 mouse_genomes_project 13 109117022 109212033 - Ipo11 protein_coding retained_intron MGP_LPJ_T0037959.1 MGP_LPJ_G0020807.1 mouse_genomes_project 13 106346839 106366622 + MGP_LPJ_P0037959 Cenpk protein_coding protein_coding MGP_LPJ_T0037960.1 MGP_LPJ_G0020807.1 mouse_genomes_project 13 106347272 106368894 + MGP_LPJ_P0037960 Cenpk protein_coding protein_coding MGP_LPJ_T0012925.1 MGP_LPJ_G0011016.1 mouse_genomes_project 13 69878434 69879430 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100284.1 MGP_LPJ_G0038547.1 mouse_genomes_project 13 58236850 58236992 + Gm24284 snoRNA snoRNA MGP_LPJ_T0037758.1 MGP_LPJ_G0020743.1 mouse_genomes_project 13 97014306 97027405 - MGP_LPJ_P0037758 Crhbp protein_coding protein_coding MGP_LPJ_T0037440.1 MGP_LPJ_G0020648.1 mouse_genomes_project 13 74024840 74026007 + MGP_LPJ_P0037440 Mrpl36 protein_coding protein_coding MGP_LPJ_T0002513.1 MGP_LPJ_G0002419.1 mouse_genomes_project 13 16664839 16666968 + MGP_LPJ_P0002513 TR_C_gene TR_C_gene MGP_LPJ_T0006570.1 MGP_LPJ_G0005454.1 mouse_genomes_project 13 37597032 37602713 + 5033403F01Rik lincRNA lincRNA MGP_LPJ_T0012873.1 MGP_LPJ_G0010964.1 mouse_genomes_project 13 19844892 19846788 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012943.1 MGP_LPJ_G0011034.1 mouse_genomes_project 13 93719286 93719535 + processed_pseudogene processed_pseudogene MGP_LPJ_T0037306.1 MGP_LPJ_G0020578.1 mouse_genomes_project 13 64343748 64374624 - MGP_LPJ_P0037306 Hsd17b3 protein_coding protein_coding MGP_LPJ_T0037307.1 MGP_LPJ_G0020578.1 mouse_genomes_project 13 64343748 64374639 - MGP_LPJ_P0037307 Hsd17b3 protein_coding protein_coding MGP_LPJ_T0036359.1 MGP_LPJ_G0020213.1 mouse_genomes_project 13 19592035 19592520 - MGP_LPJ_P0036359 Hist1h2ag protein_coding protein_coding MGP_LPJ_T0038061.1 MGP_LPJ_G0020836.1 mouse_genomes_project 13 115071190 115090399 + MGP_LPJ_P0038061 Il6st protein_coding protein_coding MGP_LPJ_T0038062.1 MGP_LPJ_G0020836.1 mouse_genomes_project 13 115071211 115111241 + MGP_LPJ_P0038062 Il6st protein_coding protein_coding MGP_LPJ_T0038063.1 MGP_LPJ_G0020836.1 mouse_genomes_project 13 115071319 115111341 + MGP_LPJ_P0038063 Il6st protein_coding nonsense_mediated_decay MGP_LPJ_T0038064.1 MGP_LPJ_G0020836.1 mouse_genomes_project 13 115074707 115087104 + MGP_LPJ_P0038064 Il6st protein_coding protein_coding MGP_LPJ_T0038065.1 MGP_LPJ_G0020836.1 mouse_genomes_project 13 115082160 115111241 + MGP_LPJ_P0038065 Il6st protein_coding protein_coding MGP_LPJ_T0038066.1 MGP_LPJ_G0020836.1 mouse_genomes_project 13 115082160 115110555 + MGP_LPJ_P0038066 Il6st protein_coding protein_coding MGP_LPJ_T0038067.1 MGP_LPJ_G0020836.1 mouse_genomes_project 13 115082160 115110555 + MGP_LPJ_P0038067 Il6st protein_coding protein_coding MGP_LPJ_T0101859.1 MGP_LPJ_G0039896.1 mouse_genomes_project 13 32064138 32067918 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0036365.1 MGP_LPJ_G0020219.1 mouse_genomes_project 13 19814518 19815409 + MGP_LPJ_P0036365 Vmn1r194 protein_coding protein_coding MGP_LPJ_T0006616.1 MGP_LPJ_G0005485.1 mouse_genomes_project 13 80867092 81045804 - lincRNA lincRNA MGP_LPJ_T0037386.1 MGP_LPJ_G0020620.1 mouse_genomes_project 13 67927470 67937865 - MGP_LPJ_P0037386 Zfp87 protein_coding protein_coding MGP_LPJ_T0037387.1 MGP_LPJ_G0020620.1 mouse_genomes_project 13 67929266 67937809 - MGP_LPJ_P0037387 Zfp87 protein_coding nonsense_mediated_decay MGP_LPJ_T0037388.1 MGP_LPJ_G0020620.1 mouse_genomes_project 13 67929671 67937834 - MGP_LPJ_P0037388 Zfp87 protein_coding protein_coding MGP_LPJ_T0037389.1 MGP_LPJ_G0020620.1 mouse_genomes_project 13 67932732 67937865 - MGP_LPJ_P0037389 Zfp87 protein_coding protein_coding MGP_LPJ_T0037012.1 MGP_LPJ_G0020488.1 mouse_genomes_project 13 54476760 54480134 + MGP_LPJ_P0037012 Eif4e1b protein_coding protein_coding MGP_LPJ_T0037013.1 MGP_LPJ_G0020488.1 mouse_genomes_project 13 54476763 54479412 + MGP_LPJ_P0037013 Eif4e1b protein_coding protein_coding MGP_LPJ_T0037014.1 MGP_LPJ_G0020488.1 mouse_genomes_project 13 54476763 54479622 + MGP_LPJ_P0037014 Eif4e1b protein_coding protein_coding MGP_LPJ_T0037015.1 MGP_LPJ_G0020488.1 mouse_genomes_project 13 54476763 54480134 + MGP_LPJ_P0037015 Eif4e1b protein_coding protein_coding MGP_LPJ_T0037016.1 MGP_LPJ_G0020488.1 mouse_genomes_project 13 54476763 54480228 + MGP_LPJ_P0037016 Eif4e1b protein_coding protein_coding MGP_LPJ_T0037017.1 MGP_LPJ_G0020488.1 mouse_genomes_project 13 54476765 54480135 + MGP_LPJ_P0037017 Eif4e1b protein_coding nonsense_mediated_decay MGP_LPJ_T0037018.1 MGP_LPJ_G0020488.1 mouse_genomes_project 13 54476765 54480143 + MGP_LPJ_P0037018 Eif4e1b protein_coding protein_coding MGP_LPJ_T0037019.1 MGP_LPJ_G0020488.1 mouse_genomes_project 13 54476775 54481125 + MGP_LPJ_P0037019 Eif4e1b protein_coding protein_coding MGP_LPJ_T0037020.1 MGP_LPJ_G0020488.1 mouse_genomes_project 13 54476782 54480235 + MGP_LPJ_P0037020 Eif4e1b protein_coding protein_coding MGP_LPJ_T0038125.1 MGP_LPJ_G0020869.1 mouse_genomes_project 13 122293132 122389599 - MGP_LPJ_P0038125 Nnt protein_coding protein_coding MGP_LPJ_T0038126.1 MGP_LPJ_G0020869.1 mouse_genomes_project 13 122293132 122389599 - MGP_LPJ_P0038126 Nnt protein_coding protein_coding MGP_LPJ_T0038127.1 MGP_LPJ_G0020869.1 mouse_genomes_project 13 122293206 122389527 - MGP_LPJ_P0038127 Nnt protein_coding unknown_likely_coding MGP_LPJ_T0038128.1 MGP_LPJ_G0020869.1 mouse_genomes_project 13 122312494 122389599 - MGP_LPJ_P0038128 Nnt protein_coding protein_coding MGP_LPJ_T0038129.1 MGP_LPJ_G0020869.1 mouse_genomes_project 13 122363959 122389599 - Nnt protein_coding processed_transcript MGP_LPJ_T0038130.1 MGP_LPJ_G0020869.1 mouse_genomes_project 13 122370592 122389599 - Nnt protein_coding processed_transcript MGP_LPJ_T0036434.1 MGP_LPJ_G0020275.1 mouse_genomes_project 13 21625185 21632145 + MGP_LPJ_P0036434 Slc17a1 protein_coding protein_coding MGP_LPJ_T0036435.1 MGP_LPJ_G0020275.1 mouse_genomes_project 13 21625439 21650189 + MGP_LPJ_P0036435 Slc17a1 protein_coding protein_coding MGP_LPJ_T0036436.1 MGP_LPJ_G0020275.1 mouse_genomes_project 13 21627726 21633982 + Slc17a1 protein_coding processed_transcript MGP_LPJ_T0012955.1 MGP_LPJ_G0011046.1 mouse_genomes_project 13 115765412 115765671 + processed_pseudogene processed_pseudogene MGP_LPJ_T0037890.1 MGP_LPJ_G0020790.1 mouse_genomes_project 13 102593032 102612622 + MGP_LPJ_P0037890 protein_coding protein_coding MGP_LPJ_T0037891.1 MGP_LPJ_G0020790.1 mouse_genomes_project 13 102593415 102598709 + protein_coding retained_intron MGP_LPJ_T0037892.1 MGP_LPJ_G0020790.1 mouse_genomes_project 13 102593679 102598787 + protein_coding retained_intron MGP_LPJ_T0037241.1 MGP_LPJ_G0020553.1 mouse_genomes_project 13 59750868 59803629 - MGP_LPJ_P0037241 Zcchc6 protein_coding protein_coding MGP_LPJ_T0037242.1 MGP_LPJ_G0020553.1 mouse_genomes_project 13 59751781 59802561 - MGP_LPJ_P0037242 Zcchc6 protein_coding unknown_likely_coding MGP_LPJ_T0036950.1 MGP_LPJ_G0020472.1 mouse_genomes_project 13 53697296 53701763 - MGP_LPJ_P0036950 Drd1 protein_coding protein_coding MGP_LPJ_T0099030.1 MGP_LPJ_G0037293.1 mouse_genomes_project 13 45923838 45923942 + Gm22960 snRNA snRNA MGP_LPJ_T0037507.1 MGP_LPJ_G0020678.1 mouse_genomes_project 13 76812670 76832215 - MGP_LPJ_P0037507 Rfesd protein_coding protein_coding MGP_LPJ_T0037508.1 MGP_LPJ_G0020678.1 mouse_genomes_project 13 76812670 76832109 - MGP_LPJ_P0037508 Rfesd protein_coding protein_coding MGP_LPJ_T0037509.1 MGP_LPJ_G0020678.1 mouse_genomes_project 13 76812672 76832065 - MGP_LPJ_P0037509 Rfesd protein_coding protein_coding MGP_LPJ_T0036427.1 MGP_LPJ_G0020271.1 mouse_genomes_project 13 21517774 21518416 + MGP_LPJ_P0036427 Hist1h1a protein_coding protein_coding MGP_LPJ_T0037770.1 MGP_LPJ_G0020752.1 mouse_genomes_project 13 98085938 98106998 - Ankdd1b protein_coding processed_transcript MGP_LPJ_T0037771.1 MGP_LPJ_G0020752.1 mouse_genomes_project 13 98086250 98143103 - MGP_LPJ_P0037771 Ankdd1b protein_coding protein_coding MGP_LPJ_T0037772.1 MGP_LPJ_G0020752.1 mouse_genomes_project 13 98086561 98106357 - Ankdd1b protein_coding retained_intron MGP_LPJ_T0037773.1 MGP_LPJ_G0020752.1 mouse_genomes_project 13 98086899 98106323 - MGP_LPJ_P0037773 Ankdd1b protein_coding protein_coding MGP_LPJ_T0037774.1 MGP_LPJ_G0020752.1 mouse_genomes_project 13 98106314 98117086 - Ankdd1b protein_coding retained_intron MGP_LPJ_T0037775.1 MGP_LPJ_G0020752.1 mouse_genomes_project 13 98115408 98143141 - MGP_LPJ_P0037775 Ankdd1b protein_coding protein_coding MGP_LPJ_T0037830.1 MGP_LPJ_G0020771.1 mouse_genomes_project 13 100471261 100473694 - MGP_LPJ_P0037830 Tmem174 protein_coding protein_coding MGP_LPJ_T0009955.1 MGP_LPJ_G0008073.1 mouse_genomes_project 13 58224660 58224766 - Mir6369 miRNA miRNA MGP_LPJ_T0037392.1 MGP_LPJ_G0020622.1 mouse_genomes_project 13 68070613 68092041 - MGP_LPJ_P0037392 protein_coding protein_coding MGP_LPJ_T0037393.1 MGP_LPJ_G0020622.1 mouse_genomes_project 13 68072786 68091932 - MGP_LPJ_P0037393 protein_coding unknown_likely_coding MGP_LPJ_T0036629.1 MGP_LPJ_G0020356.1 mouse_genomes_project 13 32512605 32520599 + MGP_LPJ_P0036629 Psmg4 protein_coding protein_coding MGP_LPJ_T0036630.1 MGP_LPJ_G0020356.1 mouse_genomes_project 13 32512605 32520603 + MGP_LPJ_P0036630 Psmg4 protein_coding protein_coding MGP_LPJ_T0036284.1 MGP_LPJ_G0020169.1 mouse_genomes_project 13 18635290 18636354 - MGP_LPJ_P0036284 Olfr1368 protein_coding protein_coding MGP_LPJ_T0036285.1 MGP_LPJ_G0020169.1 mouse_genomes_project 13 18635916 18639422 - MGP_LPJ_P0036285 Olfr1368 protein_coding protein_coding MGP_LPJ_T0101840.1 MGP_LPJ_G0039877.1 mouse_genomes_project 13 20660600 20660890 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0036409.1 MGP_LPJ_G0020257.1 mouse_genomes_project 13 21331474 21369736 - MGP_LPJ_P0036409 Hist1h2be protein_coding protein_coding MGP_LPJ_T0036410.1 MGP_LPJ_G0020257.1 mouse_genomes_project 13 21331475 21369766 - MGP_LPJ_P0036410 Hist1h2be protein_coding protein_coding MGP_LPJ_T0036411.1 MGP_LPJ_G0020257.1 mouse_genomes_project 13 21367635 21369720 - Hist1h2be protein_coding processed_transcript MGP_LPJ_T0009932.1 MGP_LPJ_G0008050.1 mouse_genomes_project 13 18954542 18954623 + Mir1896 miRNA miRNA MGP_LPJ_T0101826.1 MGP_LPJ_G0039863.1 mouse_genomes_project 13 20031921 20036990 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0101861.1 MGP_LPJ_G0039898.1 mouse_genomes_project 13 32070936 32071735 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0036862.1 MGP_LPJ_G0020442.1 mouse_genomes_project 13 48617372 48662964 + MGP_LPJ_P0036862 Ippk protein_coding protein_coding MGP_LPJ_T0036343.1 MGP_LPJ_G0020206.1 mouse_genomes_project 13 19354520 19355555 - MGP_LPJ_P0036343 Hist1h2ap protein_coding protein_coding MGP_LPJ_T0003496.1 MGP_LPJ_G0003198.1 mouse_genomes_project 13 79037001 79078565 + antisense antisense MGP_LPJ_T0003497.1 MGP_LPJ_G0003198.1 mouse_genomes_project 13 79038530 79039263 + antisense antisense MGP_LPJ_T0003498.1 MGP_LPJ_G0003198.1 mouse_genomes_project 13 79038570 79074248 + antisense antisense MGP_LPJ_T0003499.1 MGP_LPJ_G0003198.1 mouse_genomes_project 13 79041800 79077545 + antisense antisense MGP_LPJ_T0003500.1 MGP_LPJ_G0003198.1 mouse_genomes_project 13 79042190 79079396 + antisense antisense MGP_LPJ_T0003501.1 MGP_LPJ_G0003198.1 mouse_genomes_project 13 79044805 79073657 + antisense antisense MGP_LPJ_T0003502.1 MGP_LPJ_G0003198.1 mouse_genomes_project 13 79045039 79125684 + antisense antisense MGP_LPJ_T0006568.1 MGP_LPJ_G0005452.1 mouse_genomes_project 13 36033223 36036329 + Gm29590 lincRNA lincRNA MGP_LPJ_T0006572.1 MGP_LPJ_G0005456.1 mouse_genomes_project 13 40822462 40823407 + Gm28707 lincRNA lincRNA MGP_LPJ_T0006635.1 MGP_LPJ_G0005498.1 mouse_genomes_project 13 99165813 99229973 + Lncenc1 lincRNA lincRNA MGP_LPJ_T0006636.1 MGP_LPJ_G0005498.1 mouse_genomes_project 13 99214953 99229973 + Lncenc1 lincRNA lincRNA MGP_LPJ_T0006637.1 MGP_LPJ_G0005498.1 mouse_genomes_project 13 99215207 99221956 + Lncenc1 lincRNA lincRNA MGP_LPJ_T0100270.1 MGP_LPJ_G0038533.1 mouse_genomes_project 13 22607806 22607928 - Gm22358 snoRNA snoRNA MGP_LPJ_T0036479.1 MGP_LPJ_G0020285.1 mouse_genomes_project 13 22614304 22627987 - MGP_LPJ_P0036479 Acot13 protein_coding protein_coding MGP_LPJ_T0101844.1 MGP_LPJ_G0039881.1 mouse_genomes_project 13 20855796 20857975 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0037133.1 MGP_LPJ_G0020525.1 mouse_genomes_project 13 56164851 56167610 + MGP_LPJ_P0037133 Gm10782 protein_coding protein_coding MGP_LPJ_T0036440.1 MGP_LPJ_G0020278.1 mouse_genomes_project 13 21694401 21694791 + MGP_LPJ_P0036440 Hist1h2aa protein_coding protein_coding MGP_LPJ_T0036074.1 MGP_LPJ_G0020095.1 mouse_genomes_project 13 113813 160036 - MGP_LPJ_P0036074 Fam208b protein_coding protein_coding MGP_LPJ_T0012901.1 MGP_LPJ_G0010992.1 mouse_genomes_project 13 28858668 28858928 + processed_pseudogene processed_pseudogene MGP_LPJ_T0036897.1 MGP_LPJ_G0020456.1 mouse_genomes_project 13 50627829 50631992 + MGP_LPJ_P0036897 Nxnl2 protein_coding protein_coding MGP_LPJ_T0006597.1 MGP_LPJ_G0005470.1 mouse_genomes_project 13 54590888 54591432 + Gm29431 lincRNA lincRNA MGP_LPJ_T0101825.1 MGP_LPJ_G0039862.1 mouse_genomes_project 13 20004296 20005068 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0036628.1 MGP_LPJ_G0020355.1 mouse_genomes_project 13 32473007 32477759 - MGP_LPJ_P0036628 Tubb2b protein_coding protein_coding MGP_LPJ_T0000937.1 MGP_LPJ_G0000865.1 mouse_genomes_project 13 119163345 119166256 + TEC TEC MGP_LPJ_T0012893.1 MGP_LPJ_G0010984.1 mouse_genomes_project 13 25190614 25190955 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101264.1 MGP_LPJ_G0039502.1 mouse_genomes_project 13 32364699 32368783 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101265.1 MGP_LPJ_G0039502.1 mouse_genomes_project 13 32366116 32366673 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0011367.1 MGP_LPJ_G0009485.1 mouse_genomes_project 13 41870905 41871168 - Gm26086 misc_RNA misc_RNA MGP_LPJ_T0037438.1 MGP_LPJ_G0020647.1 mouse_genomes_project 13 74013696 74022376 - MGP_LPJ_P0037438 Ndufs6 protein_coding protein_coding MGP_LPJ_T0037439.1 MGP_LPJ_G0020647.1 mouse_genomes_project 13 74013701 74022286 - MGP_LPJ_P0037439 Ndufs6 protein_coding nonsense_mediated_decay MGP_LPJ_T0006581.1 MGP_LPJ_G0005462.1 mouse_genomes_project 13 47144562 47382821 - A330033J07Rik lincRNA lincRNA MGP_LPJ_T0006582.1 MGP_LPJ_G0005462.1 mouse_genomes_project 13 47359260 47382279 - A330033J07Rik lincRNA lincRNA MGP_LPJ_T0000920.1 MGP_LPJ_G0000848.1 mouse_genomes_project 13 80179942 80180404 - TEC TEC MGP_LPJ_T0017284.1 MGP_LPJ_G0015161.1 mouse_genomes_project 13 19576222 19581139 + Gm11292 processed_transcript processed_transcript MGP_LPJ_T0006599.1 MGP_LPJ_G0005472.1 mouse_genomes_project 13 54632734 54638401 - 4930526F13Rik lincRNA lincRNA MGP_LPJ_T0036096.1 MGP_LPJ_G0020107.1 mouse_genomes_project 13 845962 856476 - MGP_LPJ_P0036096 Akr1c12 protein_coding protein_coding MGP_LPJ_T0037797.1 MGP_LPJ_G0020760.1 mouse_genomes_project 13 98834312 98844309 - MGP_LPJ_P0037797 Nsa2 protein_coding protein_coding MGP_LPJ_T0036193.1 MGP_LPJ_G0020132.1 mouse_genomes_project 13 9302589 9311510 - Lgals8 protein_coding retained_intron MGP_LPJ_T0036194.1 MGP_LPJ_G0020132.1 mouse_genomes_project 13 9304017 9323080 - MGP_LPJ_P0036194 Lgals8 protein_coding protein_coding MGP_LPJ_T0036195.1 MGP_LPJ_G0020132.1 mouse_genomes_project 13 9304017 9323102 - MGP_LPJ_P0036195 Lgals8 protein_coding protein_coding MGP_LPJ_T0036196.1 MGP_LPJ_G0020132.1 mouse_genomes_project 13 9313114 9318221 - Lgals8 protein_coding retained_intron MGP_LPJ_T0036197.1 MGP_LPJ_G0020132.1 mouse_genomes_project 13 9314435 9316712 - Lgals8 protein_coding retained_intron MGP_LPJ_T0036198.1 MGP_LPJ_G0020132.1 mouse_genomes_project 13 9320877 9322654 - Lgals8 protein_coding processed_transcript MGP_LPJ_T0009973.1 MGP_LPJ_G0008091.1 mouse_genomes_project 13 95418951 95419076 - Gm25534 miRNA miRNA MGP_LPJ_T0037489.1 MGP_LPJ_G0020668.1 mouse_genomes_project 13 75086761 75102247 + MGP_LPJ_P0037489 Ccdc127 protein_coding protein_coding MGP_LPJ_T0037490.1 MGP_LPJ_G0020668.1 mouse_genomes_project 13 75086769 75099165 + MGP_LPJ_P0037490 Ccdc127 protein_coding protein_coding MGP_LPJ_T0037491.1 MGP_LPJ_G0020668.1 mouse_genomes_project 13 75086796 75097549 + MGP_LPJ_P0037491 Ccdc127 protein_coding protein_coding MGP_LPJ_T0037492.1 MGP_LPJ_G0020668.1 mouse_genomes_project 13 75086797 75097159 + MGP_LPJ_P0037492 Ccdc127 protein_coding nonsense_mediated_decay MGP_LPJ_T0037493.1 MGP_LPJ_G0020668.1 mouse_genomes_project 13 75086817 75093512 + MGP_LPJ_P0037493 Ccdc127 protein_coding protein_coding MGP_LPJ_T0006551.1 MGP_LPJ_G0005441.1 mouse_genomes_project 13 29475232 29477423 - Gm11374 lincRNA lincRNA MGP_LPJ_T0037260.1 MGP_LPJ_G0020568.1 mouse_genomes_project 13 61269390 61278005 - MGP_LPJ_P0037260 Cts8 protein_coding protein_coding MGP_LPJ_T0036549.1 MGP_LPJ_G0020319.1 mouse_genomes_project 13 28003040 28082635 - MGP_LPJ_P0036549 E2f3 protein_coding protein_coding MGP_LPJ_T0036550.1 MGP_LPJ_G0020319.1 mouse_genomes_project 13 28015249 28081186 - MGP_LPJ_P0036550 E2f3 protein_coding protein_coding MGP_LPJ_T0098491.1 MGP_LPJ_G0036768.1 mouse_genomes_project 13 41816788 41824186 + Gm15809 sense_intronic sense_intronic MGP_LPJ_T0036380.1 MGP_LPJ_G0020234.1 mouse_genomes_project 13 20644123 20649562 + MGP_LPJ_P0036380 Vmn1r213 protein_coding protein_coding MGP_LPJ_T0036509.1 MGP_LPJ_G0020299.1 mouse_genomes_project 13 25127203 25136492 + MGP_LPJ_P0036509 Prl3b1 protein_coding protein_coding MGP_LPJ_T0099025.1 MGP_LPJ_G0037288.1 mouse_genomes_project 13 40671114 40671218 + Gm22157 snRNA snRNA MGP_LPJ_T0037412.1 MGP_LPJ_G0020636.1 mouse_genomes_project 13 70082307 70175346 + MGP_LPJ_P0037412 Nsun2 protein_coding protein_coding MGP_LPJ_T0037413.1 MGP_LPJ_G0020636.1 mouse_genomes_project 13 70082329 70165819 + Nsun2 protein_coding processed_transcript MGP_LPJ_T0037416.1 MGP_LPJ_G0020636.1 mouse_genomes_project 13 70171925 70195980 + MGP_LPJ_P0037416 Nsun2 protein_coding protein_coding MGP_LPJ_T0037417.1 MGP_LPJ_G0020636.1 mouse_genomes_project 13 70171969 70196272 + MGP_LPJ_P0037417 Nsun2 protein_coding protein_coding MGP_LPJ_T0037418.1 MGP_LPJ_G0020636.1 mouse_genomes_project 13 70172477 70179470 + Nsun2 protein_coding processed_transcript MGP_LPJ_T0037419.1 MGP_LPJ_G0020636.1 mouse_genomes_project 13 70181190 70189494 + Nsun2 protein_coding retained_intron MGP_LPJ_T0037420.1 MGP_LPJ_G0020636.1 mouse_genomes_project 13 70190604 70191533 + Nsun2 protein_coding retained_intron MGP_LPJ_T0036627.1 MGP_LPJ_G0020354.1 mouse_genomes_project 13 32406826 32422640 - MGP_LPJ_P0036627 Tubb2a protein_coding protein_coding MGP_LPJ_T0003471.1 MGP_LPJ_G0003184.1 mouse_genomes_project 13 53878077 53881648 - Gm16578 antisense antisense MGP_LPJ_T0017306.1 MGP_LPJ_G0015174.1 mouse_genomes_project 13 110683415 110687726 - Gm2822 processed_transcript processed_transcript MGP_LPJ_T0036831.1 MGP_LPJ_G0020434.1 mouse_genomes_project 13 47965316 48035247 - MGP_LPJ_P0036831 Phf2 protein_coding protein_coding MGP_LPJ_T0036728.1 MGP_LPJ_G0020398.1 mouse_genomes_project 13 40407828 40408656 + MGP_LPJ_P0036728 Gm5082 protein_coding protein_coding MGP_LPJ_T0037764.1 MGP_LPJ_G0020749.1 mouse_genomes_project 13 97573047 97777973 - MGP_LPJ_P0037764 Sv2c protein_coding protein_coding MGP_LPJ_T0037765.1 MGP_LPJ_G0020749.1 mouse_genomes_project 13 97579507 97607780 - Sv2c protein_coding processed_transcript MGP_LPJ_T0037766.1 MGP_LPJ_G0020749.1 mouse_genomes_project 13 97598771 97732368 - MGP_LPJ_P0037766 Sv2c protein_coding protein_coding MGP_LPJ_T0037716.1 MGP_LPJ_G0020730.1 mouse_genomes_project 13 95144997 95157519 - MGP_LPJ_P0037716 Bhmt2 protein_coding protein_coding MGP_LPJ_T0037148.1 MGP_LPJ_G0020532.1 mouse_genomes_project 13 56589178 56718713 - MGP_LPJ_P0037148 Trpc7 protein_coding protein_coding MGP_LPJ_T0037149.1 MGP_LPJ_G0020532.1 mouse_genomes_project 13 56589178 56718752 - MGP_LPJ_P0037149 Trpc7 protein_coding protein_coding MGP_LPJ_T0037150.1 MGP_LPJ_G0020532.1 mouse_genomes_project 13 56589334 56718765 - MGP_LPJ_P0037150 Trpc7 protein_coding nonsense_mediated_decay MGP_LPJ_T0037151.1 MGP_LPJ_G0020532.1 mouse_genomes_project 13 56589828 56718470 - MGP_LPJ_P0037151 Trpc7 protein_coding protein_coding MGP_LPJ_T0037152.1 MGP_LPJ_G0020532.1 mouse_genomes_project 13 56589828 56718470 - MGP_LPJ_P0037152 Trpc7 protein_coding nonsense_mediated_decay MGP_LPJ_T0037153.1 MGP_LPJ_G0020532.1 mouse_genomes_project 13 56589828 56718470 - MGP_LPJ_P0037153 Trpc7 protein_coding protein_coding MGP_LPJ_T0037154.1 MGP_LPJ_G0020532.1 mouse_genomes_project 13 56589828 56718470 - MGP_LPJ_P0037154 Trpc7 protein_coding nonsense_mediated_decay MGP_LPJ_T0037155.1 MGP_LPJ_G0020532.1 mouse_genomes_project 13 56589828 56718470 - MGP_LPJ_P0037155 Trpc7 protein_coding protein_coding MGP_LPJ_T0036416.1 MGP_LPJ_G0020262.1 mouse_genomes_project 13 21441756 21442482 + MGP_LPJ_P0036416 Hist1h1t protein_coding protein_coding MGP_LPJ_T0100280.1 MGP_LPJ_G0038543.1 mouse_genomes_project 13 48912960 48913082 + Gm23482 snoRNA snoRNA MGP_LPJ_T0037057.1 MGP_LPJ_G0020494.1 mouse_genomes_project 13 54857575 54858162 - MGP_LPJ_P0037057 Gm17617 protein_coding protein_coding MGP_LPJ_T0037761.1 MGP_LPJ_G0020746.1 mouse_genomes_project 13 97194001 97212502 - MGP_LPJ_P0037761 F2r protein_coding protein_coding MGP_LPJ_T0037812.1 MGP_LPJ_G0020764.1 mouse_genomes_project 13 99683814 100008725 - MGP_LPJ_P0037812 Arhgef28 protein_coding protein_coding MGP_LPJ_T0011365.1 MGP_LPJ_G0009483.1 mouse_genomes_project 13 32620220 32620508 - Gm24530 misc_RNA misc_RNA MGP_LPJ_T0036603.1 MGP_LPJ_G0020350.1 mouse_genomes_project 13 32244227 32334508 - MGP_LPJ_P0036603 Serpinb6a protein_coding protein_coding MGP_LPJ_T0036604.1 MGP_LPJ_G0020350.1 mouse_genomes_project 13 32244227 32264449 - MGP_LPJ_P0036604 Serpinb6a protein_coding protein_coding MGP_LPJ_T0036605.1 MGP_LPJ_G0020350.1 mouse_genomes_project 13 32244227 32264334 - MGP_LPJ_P0036605 Serpinb6a protein_coding protein_coding MGP_LPJ_T0036606.1 MGP_LPJ_G0020350.1 mouse_genomes_project 13 32244236 32264247 - MGP_LPJ_P0036606 Serpinb6a protein_coding protein_coding MGP_LPJ_T0036607.1 MGP_LPJ_G0020350.1 mouse_genomes_project 13 32244541 32248370 - Serpinb6a protein_coding processed_transcript MGP_LPJ_T0036608.1 MGP_LPJ_G0020350.1 mouse_genomes_project 13 32245099 32334508 - MGP_LPJ_P0036608 Serpinb6a protein_coding protein_coding MGP_LPJ_T0036609.1 MGP_LPJ_G0020350.1 mouse_genomes_project 13 32249236 32263354 - MGP_LPJ_P0036609 Serpinb6a protein_coding protein_coding MGP_LPJ_T0036610.1 MGP_LPJ_G0020350.1 mouse_genomes_project 13 32249252 32264206 - MGP_LPJ_P0036610 Serpinb6a protein_coding protein_coding MGP_LPJ_T0036611.1 MGP_LPJ_G0020350.1 mouse_genomes_project 13 32249329 32263327 - MGP_LPJ_P0036611 Serpinb6a protein_coding protein_coding MGP_LPJ_T0036612.1 MGP_LPJ_G0020350.1 mouse_genomes_project 13 32249934 32264229 - Serpinb6a protein_coding retained_intron MGP_LPJ_T0036613.1 MGP_LPJ_G0020350.1 mouse_genomes_project 13 32251624 32264228 - MGP_LPJ_P0036613 Serpinb6a protein_coding protein_coding MGP_LPJ_T0036614.1 MGP_LPJ_G0020350.1 mouse_genomes_project 13 32251696 32334481 - MGP_LPJ_P0036614 Serpinb6a protein_coding protein_coding MGP_LPJ_T0036615.1 MGP_LPJ_G0020350.1 mouse_genomes_project 13 32257604 32264205 - MGP_LPJ_P0036615 Serpinb6a protein_coding protein_coding MGP_LPJ_T0036616.1 MGP_LPJ_G0020350.1 mouse_genomes_project 13 32257617 32334500 - MGP_LPJ_P0036616 Serpinb6a protein_coding protein_coding MGP_LPJ_T0036617.1 MGP_LPJ_G0020350.1 mouse_genomes_project 13 32259061 32334454 - MGP_LPJ_P0036617 Serpinb6a protein_coding protein_coding MGP_LPJ_T0036620.1 MGP_LPJ_G0020350.1 mouse_genomes_project 13 32300649 32334481 - Serpinb6a protein_coding processed_transcript MGP_LPJ_T0036621.1 MGP_LPJ_G0020350.1 mouse_genomes_project 13 32317557 32334484 - Serpinb6a protein_coding processed_transcript MGP_LPJ_T0009975.1 MGP_LPJ_G0008093.1 mouse_genomes_project 13 98033017 98033130 + Gm25213 miRNA miRNA MGP_LPJ_T0037460.1 MGP_LPJ_G0020656.1 mouse_genomes_project 13 74538424 74567392 - MGP_LPJ_P0037460 Nkd2 protein_coding protein_coding MGP_LPJ_T0037461.1 MGP_LPJ_G0020656.1 mouse_genomes_project 13 74539580 74567373 - MGP_LPJ_P0037461 Nkd2 protein_coding protein_coding MGP_LPJ_T0037462.1 MGP_LPJ_G0020656.1 mouse_genomes_project 13 74543423 74567373 - Nkd2 protein_coding retained_intron MGP_LPJ_T0036384.1 MGP_LPJ_G0020238.1 mouse_genomes_project 13 20779522 20780419 + MGP_LPJ_P0036384 Vmn1r218 protein_coding protein_coding MGP_LPJ_T0038116.1 MGP_LPJ_G0020862.1 mouse_genomes_project 13 119724316 119899806 - MGP_LPJ_P0038116 Parp8 protein_coding protein_coding MGP_LPJ_T0012888.1 MGP_LPJ_G0010979.1 mouse_genomes_project 13 23389545 23390237 - processed_pseudogene processed_pseudogene MGP_LPJ_T0036879.1 MGP_LPJ_G0020450.1 mouse_genomes_project 13 49133509 49138988 - MGP_LPJ_P0036879 Gm8674 protein_coding protein_coding MGP_LPJ_T0036407.1 MGP_LPJ_G0020255.1 mouse_genomes_project 13 21321264 21322664 + MGP_LPJ_P0036407 Hist1h3d protein_coding protein_coding MGP_LPJ_T0038010.1 MGP_LPJ_G0020824.1 mouse_genomes_project 13 110576291 110653120 + MGP_LPJ_P0038010 Elovl7 protein_coding protein_coding MGP_LPJ_T0037938.1 MGP_LPJ_G0020801.1 mouse_genomes_project 13 105923301 106020720 - MGP_LPJ_P0037938 Erbin protein_coding protein_coding MGP_LPJ_T0037939.1 MGP_LPJ_G0020801.1 mouse_genomes_project 13 105923305 105994702 - MGP_LPJ_P0037939 Erbin protein_coding protein_coding MGP_LPJ_T0037940.1 MGP_LPJ_G0020801.1 mouse_genomes_project 13 105923305 106020501 - MGP_LPJ_P0037940 Erbin protein_coding protein_coding MGP_LPJ_T0037941.1 MGP_LPJ_G0020801.1 mouse_genomes_project 13 105924121 106020501 - MGP_LPJ_P0037941 Erbin protein_coding protein_coding MGP_LPJ_T0037942.1 MGP_LPJ_G0020801.1 mouse_genomes_project 13 105924121 106020501 - MGP_LPJ_P0037942 Erbin protein_coding protein_coding MGP_LPJ_T0037943.1 MGP_LPJ_G0020801.1 mouse_genomes_project 13 105924121 106020501 - MGP_LPJ_P0037943 Erbin protein_coding protein_coding MGP_LPJ_T0037944.1 MGP_LPJ_G0020801.1 mouse_genomes_project 13 105947498 106020720 - Erbin protein_coding retained_intron MGP_LPJ_T0038017.1 MGP_LPJ_G0020826.1 mouse_genomes_project 13 110833104 111267338 + Pde4d protein_coding processed_transcript MGP_LPJ_T0038018.1 MGP_LPJ_G0020826.1 mouse_genomes_project 13 110833165 111266360 + Pde4d protein_coding processed_transcript MGP_LPJ_T0038019.1 MGP_LPJ_G0020826.1 mouse_genomes_project 13 111050886 112421039 + MGP_LPJ_P0038019 Pde4d protein_coding protein_coding MGP_LPJ_T0038020.1 MGP_LPJ_G0020826.1 mouse_genomes_project 13 111266382 112420909 + MGP_LPJ_P0038020 Pde4d protein_coding protein_coding MGP_LPJ_T0038021.1 MGP_LPJ_G0020826.1 mouse_genomes_project 13 111549356 111789631 + Pde4d protein_coding processed_transcript MGP_LPJ_T0038022.1 MGP_LPJ_G0020826.1 mouse_genomes_project 13 111549479 112229862 + Pde4d protein_coding retained_intron MGP_LPJ_T0038023.1 MGP_LPJ_G0020826.1 mouse_genomes_project 13 111549761 112420952 + MGP_LPJ_P0038023 Pde4d protein_coding protein_coding MGP_LPJ_T0038024.1 MGP_LPJ_G0020826.1 mouse_genomes_project 13 111702602 112420929 + MGP_LPJ_P0038024 Pde4d protein_coding protein_coding MGP_LPJ_T0038025.1 MGP_LPJ_G0020826.1 mouse_genomes_project 13 111890761 112420929 + MGP_LPJ_P0038025 Pde4d protein_coding protein_coding MGP_LPJ_T0038026.1 MGP_LPJ_G0020826.1 mouse_genomes_project 13 112039038 112420909 + MGP_LPJ_P0038026 Pde4d protein_coding protein_coding MGP_LPJ_T0038027.1 MGP_LPJ_G0020826.1 mouse_genomes_project 13 112087853 112420929 + MGP_LPJ_P0038027 Pde4d protein_coding protein_coding MGP_LPJ_T0038028.1 MGP_LPJ_G0020826.1 mouse_genomes_project 13 112147936 112421039 + MGP_LPJ_P0038028 Pde4d protein_coding protein_coding MGP_LPJ_T0038029.1 MGP_LPJ_G0020826.1 mouse_genomes_project 13 112147956 112229859 + Pde4d protein_coding retained_intron MGP_LPJ_T0038030.1 MGP_LPJ_G0020826.1 mouse_genomes_project 13 112218882 112223274 + Pde4d protein_coding processed_transcript MGP_LPJ_T0038031.1 MGP_LPJ_G0020826.1 mouse_genomes_project 13 112368241 112420952 + MGP_LPJ_P0038031 Pde4d protein_coding nonsense_mediated_decay MGP_LPJ_T0038032.1 MGP_LPJ_G0020826.1 mouse_genomes_project 13 112368245 112423021 + MGP_LPJ_P0038032 Pde4d protein_coding protein_coding MGP_LPJ_T0038033.1 MGP_LPJ_G0020826.1 mouse_genomes_project 13 112388042 112405976 + Pde4d protein_coding retained_intron MGP_LPJ_T0038034.1 MGP_LPJ_G0020826.1 mouse_genomes_project 13 112390194 112420909 + MGP_LPJ_P0038034 Pde4d protein_coding protein_coding MGP_LPJ_T0038035.1 MGP_LPJ_G0020826.1 mouse_genomes_project 13 112391975 112420929 + MGP_LPJ_P0038035 Pde4d protein_coding protein_coding MGP_LPJ_T0038036.1 MGP_LPJ_G0020826.1 mouse_genomes_project 13 112401611 112417913 + MGP_LPJ_P0038036 Pde4d protein_coding protein_coding MGP_LPJ_T0009937.1 MGP_LPJ_G0008055.1 mouse_genomes_project 13 21255470 21255579 + n-TStga1 miRNA miRNA MGP_LPJ_T0012920.1 MGP_LPJ_G0011011.1 mouse_genomes_project 13 65245294 65246509 - processed_pseudogene processed_pseudogene MGP_LPJ_T0036248.1 MGP_LPJ_G0020154.1 mouse_genomes_project 13 15340824 15347715 - MGP_LPJ_P0036248 Yae1d1 protein_coding protein_coding MGP_LPJ_T0009926.1 MGP_LPJ_G0008044.1 mouse_genomes_project 13 2456942 2457033 - Gm26043 miRNA miRNA MGP_LPJ_T0036328.1 MGP_LPJ_G0020191.1 mouse_genomes_project 13 19189459 19190456 - MGP_LPJ_P0036328 Olfr1360 protein_coding protein_coding MGP_LPJ_T0038121.1 MGP_LPJ_G0020867.1 mouse_genomes_project 13 121319088 121320539 + MGP_LPJ_P0038121 B430218F22Rik protein_coding protein_coding MGP_LPJ_T0006554.1 MGP_LPJ_G0005443.1 mouse_genomes_project 13 29518992 29554336 - Gm11375 lincRNA lincRNA MGP_LPJ_T0006555.1 MGP_LPJ_G0005443.1 mouse_genomes_project 13 29552770 29554378 - Gm11375 lincRNA lincRNA MGP_LPJ_T0036261.1 MGP_LPJ_G0020158.1 mouse_genomes_project 13 16776444 16786559 - Stard3nl protein_coding retained_intron MGP_LPJ_T0036262.1 MGP_LPJ_G0020158.1 mouse_genomes_project 13 16776447 16777893 - Stard3nl protein_coding retained_intron MGP_LPJ_T0036263.1 MGP_LPJ_G0020158.1 mouse_genomes_project 13 16776447 16815445 - MGP_LPJ_P0036263 Stard3nl protein_coding protein_coding MGP_LPJ_T0036264.1 MGP_LPJ_G0020158.1 mouse_genomes_project 13 16776768 16788979 - Stard3nl protein_coding retained_intron MGP_LPJ_T0036265.1 MGP_LPJ_G0020158.1 mouse_genomes_project 13 16783564 16815432 - MGP_LPJ_P0036265 Stard3nl protein_coding protein_coding MGP_LPJ_T0036266.1 MGP_LPJ_G0020158.1 mouse_genomes_project 13 16788020 16815493 - Stard3nl protein_coding retained_intron MGP_LPJ_T0036267.1 MGP_LPJ_G0020158.1 mouse_genomes_project 13 16788934 16796151 - Stard3nl protein_coding retained_intron MGP_LPJ_T0036268.1 MGP_LPJ_G0020158.1 mouse_genomes_project 13 16796077 16815457 - MGP_LPJ_P0036268 Stard3nl protein_coding protein_coding MGP_LPJ_T0100266.1 MGP_LPJ_G0038529.1 mouse_genomes_project 13 9470456 9470644 + Gm25804 snoRNA snoRNA MGP_LPJ_T0101866.1 MGP_LPJ_G0039903.1 mouse_genomes_project 13 108430185 108430741 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0037833.1 MGP_LPJ_G0020773.1 mouse_genomes_project 13 100567243 100667588 - MGP_LPJ_P0037833 Fcho2 protein_coding unknown_likely_coding MGP_LPJ_T0037834.1 MGP_LPJ_G0020773.1 mouse_genomes_project 13 100567248 100667929 - MGP_LPJ_P0037834 Fcho2 protein_coding protein_coding MGP_LPJ_T0037835.1 MGP_LPJ_G0020773.1 mouse_genomes_project 13 100567248 100667929 - MGP_LPJ_P0037835 Fcho2 protein_coding protein_coding MGP_LPJ_T0037836.1 MGP_LPJ_G0020773.1 mouse_genomes_project 13 100597631 100667929 - MGP_LPJ_P0037836 Fcho2 protein_coding protein_coding MGP_LPJ_T0037837.1 MGP_LPJ_G0020773.1 mouse_genomes_project 13 100599597 100667929 - MGP_LPJ_P0037837 Fcho2 protein_coding protein_coding MGP_LPJ_T0037838.1 MGP_LPJ_G0020773.1 mouse_genomes_project 13 100601199 100667588 - MGP_LPJ_P0037838 Fcho2 protein_coding unknown_likely_coding MGP_LPJ_T0036441.1 MGP_LPJ_G0020279.1 mouse_genomes_project 13 21712099 21751128 - MGP_LPJ_P0036441 Scgn protein_coding protein_coding MGP_LPJ_T0036442.1 MGP_LPJ_G0020279.1 mouse_genomes_project 13 21720877 21726560 - Scgn protein_coding processed_transcript MGP_LPJ_T0036350.1 MGP_LPJ_G0020208.1 mouse_genomes_project 13 19526798 19536532 + MGP_LPJ_P0036350 Pom121l2 protein_coding protein_coding MGP_LPJ_T0036351.1 MGP_LPJ_G0020208.1 mouse_genomes_project 13 19527124 19530084 + MGP_LPJ_P0036351 Pom121l2 protein_coding protein_coding MGP_LPJ_T0036163.1 MGP_LPJ_G0020126.1 mouse_genomes_project 13 6443262 6525195 - MGP_LPJ_P0036163 Zmynd11 protein_coding protein_coding MGP_LPJ_T0036164.1 MGP_LPJ_G0020126.1 mouse_genomes_project 13 6443262 6525260 - MGP_LPJ_P0036164 Zmynd11 protein_coding protein_coding MGP_LPJ_T0036165.1 MGP_LPJ_G0020126.1 mouse_genomes_project 13 6443262 6526106 - MGP_LPJ_P0036165 Zmynd11 protein_coding protein_coding MGP_LPJ_T0036166.1 MGP_LPJ_G0020126.1 mouse_genomes_project 13 6443264 6525952 - MGP_LPJ_P0036166 Zmynd11 protein_coding protein_coding MGP_LPJ_T0036167.1 MGP_LPJ_G0020126.1 mouse_genomes_project 13 6443267 6449712 - Zmynd11 protein_coding retained_intron MGP_LPJ_T0036168.1 MGP_LPJ_G0020126.1 mouse_genomes_project 13 6443267 6525242 - MGP_LPJ_P0036168 Zmynd11 protein_coding protein_coding MGP_LPJ_T0036169.1 MGP_LPJ_G0020126.1 mouse_genomes_project 13 6443521 6525748 - MGP_LPJ_P0036169 Zmynd11 protein_coding protein_coding MGP_LPJ_T0036170.1 MGP_LPJ_G0020126.1 mouse_genomes_project 13 6445291 6478543 - MGP_LPJ_P0036170 Zmynd11 protein_coding protein_coding MGP_LPJ_T0036171.1 MGP_LPJ_G0020126.1 mouse_genomes_project 13 6447577 6448949 - Zmynd11 protein_coding retained_intron MGP_LPJ_T0036172.1 MGP_LPJ_G0020126.1 mouse_genomes_project 13 6451920 6454583 - Zmynd11 protein_coding retained_intron MGP_LPJ_T0036173.1 MGP_LPJ_G0020126.1 mouse_genomes_project 13 6452731 6526062 - MGP_LPJ_P0036173 Zmynd11 protein_coding protein_coding MGP_LPJ_T0036174.1 MGP_LPJ_G0020126.1 mouse_genomes_project 13 6453576 6525216 - MGP_LPJ_P0036174 Zmynd11 protein_coding protein_coding MGP_LPJ_T0036175.1 MGP_LPJ_G0020126.1 mouse_genomes_project 13 6456048 6525729 - MGP_LPJ_P0036175 Zmynd11 protein_coding protein_coding MGP_LPJ_T0036176.1 MGP_LPJ_G0020126.1 mouse_genomes_project 13 6456048 6526113 - MGP_LPJ_P0036176 Zmynd11 protein_coding protein_coding MGP_LPJ_T0036177.1 MGP_LPJ_G0020126.1 mouse_genomes_project 13 6456067 6497719 - Zmynd11 protein_coding processed_transcript MGP_LPJ_T0036178.1 MGP_LPJ_G0020126.1 mouse_genomes_project 13 6456104 6497361 - Zmynd11 protein_coding processed_transcript MGP_LPJ_T0036179.1 MGP_LPJ_G0020126.1 mouse_genomes_project 13 6456107 6525190 - MGP_LPJ_P0036179 Zmynd11 protein_coding protein_coding MGP_LPJ_T0036180.1 MGP_LPJ_G0020126.1 mouse_genomes_project 13 6457065 6497827 - MGP_LPJ_P0036180 Zmynd11 protein_coding protein_coding MGP_LPJ_T0036181.1 MGP_LPJ_G0020126.1 mouse_genomes_project 13 6467872 6525226 - MGP_LPJ_P0036181 Zmynd11 protein_coding protein_coding MGP_LPJ_T0012891.1 MGP_LPJ_G0010982.1 mouse_genomes_project 13 24625123 24625545 - processed_pseudogene processed_pseudogene MGP_LPJ_T0037408.1 MGP_LPJ_G0020633.1 mouse_genomes_project 13 69112466 69129032 + MGP_LPJ_P0037408 1700001L19Rik protein_coding protein_coding MGP_LPJ_T0037468.1 MGP_LPJ_G0020661.1 mouse_genomes_project 13 74738407 74760349 + Tppp protein_coding processed_transcript MGP_LPJ_T0037469.1 MGP_LPJ_G0020661.1 mouse_genomes_project 13 74738419 74764730 + MGP_LPJ_P0037469 Tppp protein_coding protein_coding MGP_LPJ_T0037470.1 MGP_LPJ_G0020661.1 mouse_genomes_project 13 74738433 74750444 + Tppp protein_coding retained_intron MGP_LPJ_T0037471.1 MGP_LPJ_G0020661.1 mouse_genomes_project 13 74759727 74762577 + Tppp protein_coding processed_transcript MGP_LPJ_T0101852.1 MGP_LPJ_G0039889.1 mouse_genomes_project 13 31229020 31229178 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0006557.1 MGP_LPJ_G0005445.1 mouse_genomes_project 13 29711507 29728522 - 1700018A04Rik lincRNA lincRNA MGP_LPJ_T0006558.1 MGP_LPJ_G0005445.1 mouse_genomes_project 13 29713413 29728530 - 1700018A04Rik lincRNA lincRNA MGP_LPJ_T0006559.1 MGP_LPJ_G0005445.1 mouse_genomes_project 13 29724303 29728530 - 1700018A04Rik lincRNA lincRNA MGP_LPJ_T0100268.1 MGP_LPJ_G0038531.1 mouse_genomes_project 13 20502645 20502776 - Gm23774 snoRNA snoRNA MGP_LPJ_T0009942.1 MGP_LPJ_G0008060.1 mouse_genomes_project 13 36650885 36651001 + Gm27387 miRNA miRNA MGP_LPJ_T0003450.1 MGP_LPJ_G0003167.1 mouse_genomes_project 13 19563941 19564812 + Gm11290 antisense antisense MGP_LPJ_T0003451.1 MGP_LPJ_G0003167.1 mouse_genomes_project 13 19563941 19564834 + Gm11290 antisense antisense MGP_LPJ_T0037563.1 MGP_LPJ_G0020693.1 mouse_genomes_project 13 82771252 82785019 + MGP_LPJ_P0037563 Cetn3 protein_coding protein_coding MGP_LPJ_T0038095.1 MGP_LPJ_G0020854.1 mouse_genomes_project 13 116487724 116863881 + MGP_LPJ_P0038095 Arl15 protein_coding protein_coding MGP_LPJ_T0000927.1 MGP_LPJ_G0000855.1 mouse_genomes_project 13 96151386 96152034 + TEC TEC MGP_LPJ_T0038110.1 MGP_LPJ_G0020860.1 mouse_genomes_project 13 117836071 117837901 - MGP_LPJ_P0038110 Pelo protein_coding protein_coding MGP_LPJ_T0037459.1 MGP_LPJ_G0020655.1 mouse_genomes_project 13 74482637 74536634 + MGP_LPJ_P0037459 Slc12a7 protein_coding protein_coding MGP_LPJ_T0037495.1 MGP_LPJ_G0020670.1 mouse_genomes_project 13 75109006 75117493 - MGP_LPJ_P0037495 Zfp72 protein_coding protein_coding MGP_LPJ_T0012876.1 MGP_LPJ_G0010967.1 mouse_genomes_project 13 20372732 20373164 + processed_pseudogene processed_pseudogene MGP_LPJ_T0036705.1 MGP_LPJ_G0020387.1 mouse_genomes_project 13 39568701 39671226 + MGP_LPJ_P0036705 Gcnt2 protein_coding protein_coding MGP_LPJ_T0036706.1 MGP_LPJ_G0020387.1 mouse_genomes_project 13 39594586 39671226 + MGP_LPJ_P0036706 Gcnt2 protein_coding protein_coding MGP_LPJ_T0036707.1 MGP_LPJ_G0020387.1 mouse_genomes_project 13 39626463 39671226 + MGP_LPJ_P0036707 Gcnt2 protein_coding protein_coding MGP_LPJ_T0036313.1 MGP_LPJ_G0020181.1 mouse_genomes_project 13 19011794 19014242 + MGP_LPJ_P0036313 AK157302 protein_coding protein_coding MGP_LPJ_T0038074.1 MGP_LPJ_G0020841.1 mouse_genomes_project 13 115498534 115561063 - MGP_LPJ_P0038074 Skiv2l2 protein_coding protein_coding MGP_LPJ_T0100296.1 MGP_LPJ_G0038559.1 mouse_genomes_project 13 91434215 91434349 + Gm24507 snoRNA snoRNA MGP_LPJ_T0006603.1 MGP_LPJ_G0005475.1 mouse_genomes_project 13 58046312 58047230 + 1700066J03Rik lincRNA lincRNA MGP_LPJ_T0036205.1 MGP_LPJ_G0020138.1 mouse_genomes_project 13 10935050 10957842 + Gng4 protein_coding processed_transcript MGP_LPJ_T0036206.1 MGP_LPJ_G0020138.1 mouse_genomes_project 13 10935320 10979683 + MGP_LPJ_P0036206 Gng4 protein_coding protein_coding MGP_LPJ_T0036153.1 MGP_LPJ_G0020124.1 mouse_genomes_project 13 5830967 5911888 + MGP_LPJ_P0036153 Larp4b protein_coding protein_coding MGP_LPJ_T0036154.1 MGP_LPJ_G0020124.1 mouse_genomes_project 13 5830993 5912081 + MGP_LPJ_P0036154 Larp4b protein_coding protein_coding MGP_LPJ_T0036155.1 MGP_LPJ_G0020124.1 mouse_genomes_project 13 5830998 5862318 + MGP_LPJ_P0036155 Larp4b protein_coding protein_coding MGP_LPJ_T0036156.1 MGP_LPJ_G0020124.1 mouse_genomes_project 13 5831068 5916393 + MGP_LPJ_P0036156 Larp4b protein_coding protein_coding MGP_LPJ_T0036157.1 MGP_LPJ_G0020124.1 mouse_genomes_project 13 5877037 5884504 + Larp4b protein_coding processed_transcript MGP_LPJ_T0036158.1 MGP_LPJ_G0020124.1 mouse_genomes_project 13 5877257 5878025 + Larp4b protein_coding processed_transcript MGP_LPJ_T0036159.1 MGP_LPJ_G0020124.1 mouse_genomes_project 13 5909153 5913901 + Larp4b protein_coding retained_intron MGP_LPJ_T0003519.1 MGP_LPJ_G0003207.1 mouse_genomes_project 13 102021914 102023459 - BC001981 antisense antisense MGP_LPJ_T0003520.1 MGP_LPJ_G0003207.1 mouse_genomes_project 13 102023154 102023457 - BC001981 antisense antisense MGP_LPJ_T0037378.1 MGP_LPJ_G0020615.1 mouse_genomes_project 13 67804545 67830224 - MGP_LPJ_P0037378 protein_coding protein_coding MGP_LPJ_T0036569.1 MGP_LPJ_G0020331.1 mouse_genomes_project 13 29966312 29970265 + MGP_LPJ_P0036569 Foxc1 protein_coding protein_coding MGP_LPJ_T0006622.1 MGP_LPJ_G0005489.1 mouse_genomes_project 13 84815150 84838904 + lincRNA lincRNA MGP_LPJ_T0006623.1 MGP_LPJ_G0005489.1 mouse_genomes_project 13 84815150 84975549 + lincRNA lincRNA MGP_LPJ_T0006625.1 MGP_LPJ_G0005489.1 mouse_genomes_project 13 84824249 84833265 + lincRNA lincRNA MGP_LPJ_T0006626.1 MGP_LPJ_G0005489.1 mouse_genomes_project 13 84828614 84833117 + lincRNA lincRNA MGP_LPJ_T0006627.1 MGP_LPJ_G0005489.1 mouse_genomes_project 13 84836458 84987964 + lincRNA lincRNA MGP_LPJ_T0100265.1 MGP_LPJ_G0038528.1 mouse_genomes_project 13 9470413 9470644 + Gm25483 snoRNA snoRNA MGP_LPJ_T0100260.1 MGP_LPJ_G0038523.1 mouse_genomes_project 13 1793959 1794091 - Gm24790 snoRNA snoRNA MGP_LPJ_T0037362.1 MGP_LPJ_G0020605.1 mouse_genomes_project 13 67478502 67491978 + MGP_LPJ_P0037362 Zfp759 protein_coding protein_coding MGP_LPJ_T0037068.1 MGP_LPJ_G0020501.1 mouse_genomes_project 13 55104539 55119542 + MGP_LPJ_P0037068 Rgs14 protein_coding protein_coding MGP_LPJ_T0037069.1 MGP_LPJ_G0020501.1 mouse_genomes_project 13 55104578 55114297 + MGP_LPJ_P0037069 Rgs14 protein_coding nonsense_mediated_decay MGP_LPJ_T0037070.1 MGP_LPJ_G0020501.1 mouse_genomes_project 13 55114020 55119541 + Rgs14 protein_coding retained_intron MGP_LPJ_T0038051.1 MGP_LPJ_G0020833.1 mouse_genomes_project 13 114297459 114372654 - MGP_LPJ_P0038051 protein_coding protein_coding MGP_LPJ_T0038052.1 MGP_LPJ_G0020833.1 mouse_genomes_project 13 114299831 114302412 - protein_coding retained_intron MGP_LPJ_T0038053.1 MGP_LPJ_G0020833.1 mouse_genomes_project 13 114304529 114305666 - protein_coding retained_intron MGP_LPJ_T0038054.1 MGP_LPJ_G0020833.1 mouse_genomes_project 13 114318570 114319515 - protein_coding processed_transcript MGP_LPJ_T0038055.1 MGP_LPJ_G0020833.1 mouse_genomes_project 13 114318945 114368941 - MGP_LPJ_P0038055 protein_coding protein_coding MGP_LPJ_T0006535.1 MGP_LPJ_G0005429.1 mouse_genomes_project 13 22141330 22151699 - Gm11345 lincRNA lincRNA MGP_LPJ_T0036437.1 MGP_LPJ_G0020276.1 mouse_genomes_project 13 21656337 21673642 - MGP_LPJ_P0036437 Slc17a4 protein_coding protein_coding MGP_LPJ_T0036438.1 MGP_LPJ_G0020276.1 mouse_genomes_project 13 21656488 21673644 - MGP_LPJ_P0036438 Slc17a4 protein_coding protein_coding MGP_LPJ_T0037895.1 MGP_LPJ_G0020792.1 mouse_genomes_project 13 102645024 102680001 - MGP_LPJ_P0037895 Cdk7 protein_coding protein_coding MGP_LPJ_T0037114.1 MGP_LPJ_G0020516.1 mouse_genomes_project 13 55445859 55456198 + MGP_LPJ_P0037114 B230219D22Rik protein_coding protein_coding MGP_LPJ_T0037449.1 MGP_LPJ_G0020652.1 mouse_genomes_project 13 74331338 74357912 + MGP_LPJ_P0037449 Tert protein_coding protein_coding MGP_LPJ_T0012915.1 MGP_LPJ_G0011006.1 mouse_genomes_project 13 60802565 60802931 + processed_pseudogene processed_pseudogene MGP_LPJ_T0009981.1 MGP_LPJ_G0008099.1 mouse_genomes_project 13 115678190 115678270 + Mir449b miRNA miRNA MGP_LPJ_T0036334.1 MGP_LPJ_G0020197.1 mouse_genomes_project 13 19266686 19266998 - MGP_LPJ_P0036334 Hist1h4k protein_coding protein_coding MGP_LPJ_T0009949.1 MGP_LPJ_G0008067.1 mouse_genomes_project 13 51281314 51282672 + miRNA miRNA MGP_LPJ_T0009948.1 MGP_LPJ_G0008066.1 mouse_genomes_project 13 49418133 49418241 + Mir683-2 miRNA miRNA MGP_LPJ_T0006645.1 MGP_LPJ_G0005504.1 mouse_genomes_project 13 100975046 100981716 + Gm807 lincRNA lincRNA MGP_LPJ_T0037166.1 MGP_LPJ_G0020537.1 mouse_genomes_project 13 58076138 58120649 - MGP_LPJ_P0037166 Ubqln1 protein_coding protein_coding MGP_LPJ_T0037167.1 MGP_LPJ_G0020537.1 mouse_genomes_project 13 58076138 58120649 - MGP_LPJ_P0037167 Ubqln1 protein_coding protein_coding MGP_LPJ_T0003526.1 MGP_LPJ_G0003212.1 mouse_genomes_project 13 109103531 109105428 + Gm28988 antisense antisense MGP_LPJ_T0009941.1 MGP_LPJ_G0008059.1 mouse_genomes_project 13 29772947 29773045 - Gm27516 miRNA miRNA MGP_LPJ_T0036276.1 MGP_LPJ_G0020164.1 mouse_genomes_project 13 17532317 17713153 + Elmo1 protein_coding retained_intron MGP_LPJ_T0036277.1 MGP_LPJ_G0020164.1 mouse_genomes_project 13 17532340 18078876 + MGP_LPJ_P0036277 Elmo1 protein_coding protein_coding MGP_LPJ_T0036278.1 MGP_LPJ_G0020164.1 mouse_genomes_project 13 17554368 17802993 + Elmo1 protein_coding retained_intron MGP_LPJ_T0036279.1 MGP_LPJ_G0020164.1 mouse_genomes_project 13 17945122 18065074 + Elmo1 protein_coding retained_intron MGP_LPJ_T0036496.1 MGP_LPJ_G0020292.1 mouse_genomes_project 13 23060874 23078917 - MGP_LPJ_P0036496 Nrsn1 protein_coding protein_coding MGP_LPJ_T0036497.1 MGP_LPJ_G0020292.1 mouse_genomes_project 13 23061026 23071520 - MGP_LPJ_P0036497 Nrsn1 protein_coding protein_coding MGP_LPJ_T0036498.1 MGP_LPJ_G0020292.1 mouse_genomes_project 13 23062242 23071517 - Nrsn1 protein_coding processed_transcript MGP_LPJ_T0036499.1 MGP_LPJ_G0020292.1 mouse_genomes_project 13 23078869 23079337 - Nrsn1 protein_coding processed_transcript MGP_LPJ_T0099043.1 MGP_LPJ_G0037306.1 mouse_genomes_project 13 117866071 117866178 + Gm25985 snRNA snRNA MGP_LPJ_T0036492.1 MGP_LPJ_G0020291.1 mouse_genomes_project 13 22859016 22929785 + MGP_LPJ_P0036492 Dcdc2a protein_coding protein_coding MGP_LPJ_T0036493.1 MGP_LPJ_G0020291.1 mouse_genomes_project 13 22859265 23019538 + MGP_LPJ_P0036493 Dcdc2a protein_coding protein_coding MGP_LPJ_T0036494.1 MGP_LPJ_G0020291.1 mouse_genomes_project 13 22903383 22927668 + Dcdc2a protein_coding processed_transcript MGP_LPJ_T0036495.1 MGP_LPJ_G0020291.1 mouse_genomes_project 13 22995821 23013544 + Dcdc2a protein_coding processed_transcript MGP_LPJ_T0003505.1 MGP_LPJ_G0003200.1 mouse_genomes_project 13 93115364 93152101 - 4833422C13Rik antisense antisense MGP_LPJ_T0003506.1 MGP_LPJ_G0003200.1 mouse_genomes_project 13 93121601 93152005 - 4833422C13Rik antisense antisense MGP_LPJ_T0003507.1 MGP_LPJ_G0003200.1 mouse_genomes_project 13 93127017 93152057 - 4833422C13Rik antisense antisense MGP_LPJ_T0037078.1 MGP_LPJ_G0020506.1 mouse_genomes_project 13 55206917 55215809 + MGP_LPJ_P0037078 Prr7 protein_coding protein_coding MGP_LPJ_T0036702.1 MGP_LPJ_G0020385.1 mouse_genomes_project 13 39396966 39400851 + MGP_LPJ_P0036702 Gm9979 protein_coding protein_coding MGP_LPJ_T0038039.1 MGP_LPJ_G0020829.1 mouse_genomes_project 13 112876867 112884435 + MGP_LPJ_P0038039 Plk2 protein_coding protein_coding MGP_LPJ_T0036255.1 MGP_LPJ_G0020156.1 mouse_genomes_project 13 16113285 16280510 + MGP_LPJ_P0036255 Vps41 protein_coding protein_coding MGP_LPJ_T0037379.1 MGP_LPJ_G0020616.1 mouse_genomes_project 13 67836433 67861156 - MGP_LPJ_P0037379 protein_coding protein_coding MGP_LPJ_T0037962.1 MGP_LPJ_G0020809.1 mouse_genomes_project 13 106773266 106961537 - MGP_LPJ_P0037962 Cwc27 protein_coding protein_coding MGP_LPJ_T0037963.1 MGP_LPJ_G0020809.1 mouse_genomes_project 13 106892912 106936188 - Cwc27 protein_coding processed_transcript MGP_LPJ_T0037964.1 MGP_LPJ_G0020809.1 mouse_genomes_project 13 106934052 106936223 - Cwc27 protein_coding processed_transcript MGP_LPJ_T0037966.1 MGP_LPJ_G0020809.1 mouse_genomes_project 13 106952313 106961726 - MGP_LPJ_P0037966 Cwc27 protein_coding protein_coding MGP_LPJ_T0037965.1 MGP_LPJ_G0020810.1 mouse_genomes_project 13 106936056 106988646 + Srek1ip1 protein_coding processed_transcript MGP_LPJ_T0037967.1 MGP_LPJ_G0020810.1 mouse_genomes_project 13 106961760 106989560 + MGP_LPJ_P0037967 Srek1ip1 protein_coding protein_coding MGP_LPJ_T0037968.1 MGP_LPJ_G0020810.1 mouse_genomes_project 13 106961822 106988955 + MGP_LPJ_P0037968 Srek1ip1 protein_coding nonsense_mediated_decay MGP_LPJ_T0037969.1 MGP_LPJ_G0020810.1 mouse_genomes_project 13 106974888 106984020 + Srek1ip1 protein_coding retained_intron MGP_LPJ_T0037970.1 MGP_LPJ_G0020810.1 mouse_genomes_project 13 106983796 106989557 + Srek1ip1 protein_coding retained_intron MGP_LPJ_T0012879.1 MGP_LPJ_G0010970.1 mouse_genomes_project 13 21108121 21108277 + processed_pseudogene processed_pseudogene MGP_LPJ_T0036295.1 MGP_LPJ_G0020174.1 mouse_genomes_project 13 18855324 18862321 + MGP_LPJ_P0036295 Zscan12 protein_coding protein_coding MGP_LPJ_T0036296.1 MGP_LPJ_G0020174.1 mouse_genomes_project 13 18855785 18862321 + MGP_LPJ_P0036296 Zscan12 protein_coding protein_coding MGP_LPJ_T0037693.1 MGP_LPJ_G0020720.1 mouse_genomes_project 13 94046251 94150073 + MGP_LPJ_P0037693 Serinc5 protein_coding protein_coding MGP_LPJ_T0037231.1 MGP_LPJ_G0020547.1 mouse_genomes_project 13 59604062 59647660 - MGP_LPJ_P0037231 Golm1 protein_coding protein_coding MGP_LPJ_T0037232.1 MGP_LPJ_G0020547.1 mouse_genomes_project 13 59604062 59647660 - MGP_LPJ_P0037232 Golm1 protein_coding protein_coding MGP_LPJ_T0000916.1 MGP_LPJ_G0000844.1 mouse_genomes_project 13 63821832 63822791 - TEC TEC MGP_LPJ_T0036686.1 MGP_LPJ_G0020376.1 mouse_genomes_project 13 36594131 36623677 + MGP_LPJ_P0036686 Riok1 protein_coding protein_coding MGP_LPJ_T0037514.1 MGP_LPJ_G0020682.1 mouse_genomes_project 13 77202757 77858261 + MGP_LPJ_P0037514 Mctp1 protein_coding protein_coding MGP_LPJ_T0037515.1 MGP_LPJ_G0020682.1 mouse_genomes_project 13 77405567 77591967 + MGP_LPJ_P0037515 Mctp1 protein_coding protein_coding MGP_LPJ_T0037516.1 MGP_LPJ_G0020682.1 mouse_genomes_project 13 77405621 77558726 + MGP_LPJ_P0037516 Mctp1 protein_coding protein_coding MGP_LPJ_T0037517.1 MGP_LPJ_G0020682.1 mouse_genomes_project 13 77405654 77856412 + MGP_LPJ_P0037517 Mctp1 protein_coding protein_coding MGP_LPJ_T0037518.1 MGP_LPJ_G0020682.1 mouse_genomes_project 13 77549567 77653688 + Mctp1 protein_coding retained_intron MGP_LPJ_T0037519.1 MGP_LPJ_G0020682.1 mouse_genomes_project 13 77650060 77652929 + Mctp1 protein_coding retained_intron MGP_LPJ_T0037520.1 MGP_LPJ_G0020682.1 mouse_genomes_project 13 77650299 77857199 + Mctp1 protein_coding retained_intron MGP_LPJ_T0037521.1 MGP_LPJ_G0020682.1 mouse_genomes_project 13 77650336 77653131 + Mctp1 protein_coding retained_intron MGP_LPJ_T0036234.1 MGP_LPJ_G0020145.1 mouse_genomes_project 13 11810537 11813272 - MGP_LPJ_P0036234 Mrpl32 protein_coding protein_coding MGP_LPJ_T0037132.1 MGP_LPJ_G0020524.1 mouse_genomes_project 13 56086255 56094153 - MGP_LPJ_P0037132 Cxcl14 protein_coding protein_coding MGP_LPJ_T0101831.1 MGP_LPJ_G0039868.1 mouse_genomes_project 13 20160430 20161524 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0012887.1 MGP_LPJ_G0010978.1 mouse_genomes_project 13 23389121 23390237 - processed_pseudogene processed_pseudogene MGP_LPJ_T0012878.1 MGP_LPJ_G0010969.1 mouse_genomes_project 13 21026628 21026776 + processed_pseudogene processed_pseudogene MGP_LPJ_T0036399.1 MGP_LPJ_G0020247.1 mouse_genomes_project 13 21274129 21274992 + MGP_LPJ_P0036399 Hist1h3g protein_coding protein_coding MGP_LPJ_T0036513.1 MGP_LPJ_G0020302.1 mouse_genomes_project 13 25233164 25242700 + MGP_LPJ_P0036513 Prl8a2 protein_coding protein_coding MGP_LPJ_T0036514.1 MGP_LPJ_G0020302.1 mouse_genomes_project 13 25233170 25242688 + MGP_LPJ_P0036514 Prl8a2 protein_coding protein_coding MGP_LPJ_T0099011.1 MGP_LPJ_G0037274.1 mouse_genomes_project 13 11828211 11828324 - Gm25444 snRNA snRNA MGP_LPJ_T0099024.1 MGP_LPJ_G0037287.1 mouse_genomes_project 13 40324359 40324525 - Gm24819 snRNA snRNA MGP_LPJ_T0037601.1 MGP_LPJ_G0020697.1 mouse_genomes_project 13 86350299 86437616 - MGP_LPJ_P0037601 Rasa1 protein_coding protein_coding MGP_LPJ_T0037602.1 MGP_LPJ_G0020697.1 mouse_genomes_project 13 86351334 86353875 - Rasa1 protein_coding retained_intron MGP_LPJ_T0037603.1 MGP_LPJ_G0020697.1 mouse_genomes_project 13 86351570 86357225 - Rasa1 protein_coding retained_intron MGP_LPJ_T0037604.1 MGP_LPJ_G0020697.1 mouse_genomes_project 13 86356893 86362230 - Rasa1 protein_coding retained_intron MGP_LPJ_T0037605.1 MGP_LPJ_G0020697.1 mouse_genomes_project 13 86359743 86361541 - Rasa1 protein_coding retained_intron MGP_LPJ_T0037606.1 MGP_LPJ_G0020697.1 mouse_genomes_project 13 86364218 86366725 - Rasa1 protein_coding retained_intron MGP_LPJ_T0037607.1 MGP_LPJ_G0020697.1 mouse_genomes_project 13 86364808 86365997 - Rasa1 protein_coding retained_intron MGP_LPJ_T0037608.1 MGP_LPJ_G0020697.1 mouse_genomes_project 13 86373831 86382879 - Rasa1 protein_coding retained_intron MGP_LPJ_T0037609.1 MGP_LPJ_G0020697.1 mouse_genomes_project 13 86379930 86387153 - Rasa1 protein_coding retained_intron MGP_LPJ_T0002612.1 MGP_LPJ_G0002509.1 mouse_genomes_project 13 16581692 16582225 + MGP_LPJ_P0002612 Tcrg-V4 TR_V_gene TR_V_gene MGP_LPJ_T0037810.1 MGP_LPJ_G0020762.1 mouse_genomes_project 13 98885643 98907874 - MGP_LPJ_P0037810 Hexb protein_coding protein_coding MGP_LPJ_T0036850.1 MGP_LPJ_G0020439.1 mouse_genomes_project 13 48419201 48436545 - MGP_LPJ_P0036850 Susd3 protein_coding protein_coding MGP_LPJ_T0036851.1 MGP_LPJ_G0020439.1 mouse_genomes_project 13 48419340 48436957 - MGP_LPJ_P0036851 Susd3 protein_coding protein_coding MGP_LPJ_T0036852.1 MGP_LPJ_G0020439.1 mouse_genomes_project 13 48419814 48436914 - MGP_LPJ_P0036852 Susd3 protein_coding protein_coding MGP_LPJ_T0036853.1 MGP_LPJ_G0020439.1 mouse_genomes_project 13 48425937 48428871 - Susd3 protein_coding processed_transcript MGP_LPJ_T0036854.1 MGP_LPJ_G0020439.1 mouse_genomes_project 13 48426239 48436405 - MGP_LPJ_P0036854 Susd3 protein_coding protein_coding MGP_LPJ_T0036855.1 MGP_LPJ_G0020439.1 mouse_genomes_project 13 48427156 48431153 - Susd3 protein_coding processed_transcript MGP_LPJ_T0006659.1 MGP_LPJ_G0005516.1 mouse_genomes_project 13 114563549 114567474 + Gm15322 lincRNA lincRNA MGP_LPJ_T0038146.1 MGP_LPJ_G0020877.1 mouse_genomes_project 13 122701868 122722476 + MGP_LPJ_P0038146 Hmgcs1 protein_coding protein_coding MGP_LPJ_T0037264.1 MGP_LPJ_G0020572.1 mouse_genomes_project 13 63063372 63085460 - MGP_LPJ_P0037264 Fbp2 protein_coding protein_coding MGP_LPJ_T0037041.1 MGP_LPJ_G0020492.1 mouse_genomes_project 13 54738750 54822094 - MGP_LPJ_P0037041 Uimc1 protein_coding protein_coding MGP_LPJ_T0037042.1 MGP_LPJ_G0020492.1 mouse_genomes_project 13 54738750 54822099 - MGP_LPJ_P0037042 Uimc1 protein_coding protein_coding MGP_LPJ_T0037043.1 MGP_LPJ_G0020492.1 mouse_genomes_project 13 54739065 54822053 - MGP_LPJ_P0037043 Uimc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0037044.1 MGP_LPJ_G0020492.1 mouse_genomes_project 13 54739963 54822099 - MGP_LPJ_P0037044 Uimc1 protein_coding protein_coding MGP_LPJ_T0037045.1 MGP_LPJ_G0020492.1 mouse_genomes_project 13 54791223 54822098 - Uimc1 protein_coding retained_intron MGP_LPJ_T0012949.1 MGP_LPJ_G0011040.1 mouse_genomes_project 13 107070473 107070881 + processed_pseudogene processed_pseudogene MGP_LPJ_T0037643.1 MGP_LPJ_G0020706.1 mouse_genomes_project 13 92300042 92303478 + MGP_LPJ_P0037643 Rps23 protein_coding protein_coding MGP_LPJ_T0036505.1 MGP_LPJ_G0020297.1 mouse_genomes_project 13 24962753 25009971 + MGP_LPJ_P0036505 protein_coding protein_coding MGP_LPJ_T0099013.1 MGP_LPJ_G0037276.1 mouse_genomes_project 13 15153377 15153484 - Gm24018 snRNA snRNA MGP_LPJ_T0037503.1 MGP_LPJ_G0020676.1 mouse_genomes_project 13 76686935 76750123 - MGP_LPJ_P0037503 Rhobtb3 protein_coding protein_coding MGP_LPJ_T0037504.1 MGP_LPJ_G0020676.1 mouse_genomes_project 13 76689448 76702939 - Rhobtb3 protein_coding processed_transcript MGP_LPJ_T0037505.1 MGP_LPJ_G0020676.1 mouse_genomes_project 13 76733174 76750181 - MGP_LPJ_P0037505 Rhobtb3 protein_coding protein_coding MGP_LPJ_T0037170.1 MGP_LPJ_G0020540.1 mouse_genomes_project 13 58290174 58295345 - MGP_LPJ_P0037170 2210016F16Rik protein_coding protein_coding MGP_LPJ_T0100303.1 MGP_LPJ_G0038566.1 mouse_genomes_project 13 120947438 120947568 + Gm26349 snoRNA snoRNA MGP_LPJ_T0006624.1 MGP_LPJ_G0005490.1 mouse_genomes_project 13 84817212 84825608 - Gm26803 lincRNA lincRNA MGP_LPJ_T0038085.1 MGP_LPJ_G0020848.1 mouse_genomes_project 13 115749506 115756661 - MGP_LPJ_P0038085 Gzma protein_coding protein_coding MGP_LPJ_T0097987.1 MGP_LPJ_G0036268.1 mouse_genomes_project 13 46037343 46037862 + pseudogene pseudogene MGP_LPJ_T0037079.1 MGP_LPJ_G0020507.1 mouse_genomes_project 13 55216082 55230619 - MGP_LPJ_P0037079 Dbn1 protein_coding protein_coding MGP_LPJ_T0037080.1 MGP_LPJ_G0020507.1 mouse_genomes_project 13 55216082 55230619 - MGP_LPJ_P0037080 Dbn1 protein_coding protein_coding MGP_LPJ_T0037081.1 MGP_LPJ_G0020507.1 mouse_genomes_project 13 55216597 55230569 - MGP_LPJ_P0037081 Dbn1 protein_coding protein_coding MGP_LPJ_T0037082.1 MGP_LPJ_G0020507.1 mouse_genomes_project 13 55217778 55230574 - Dbn1 protein_coding retained_intron MGP_LPJ_T0037083.1 MGP_LPJ_G0020507.1 mouse_genomes_project 13 55223915 55224644 - Dbn1 protein_coding retained_intron MGP_LPJ_T0037084.1 MGP_LPJ_G0020507.1 mouse_genomes_project 13 55223937 55224757 - Dbn1 protein_coding retained_intron MGP_LPJ_T0037085.1 MGP_LPJ_G0020507.1 mouse_genomes_project 13 55224049 55230147 - MGP_LPJ_P0037085 Dbn1 protein_coding protein_coding MGP_LPJ_T0037086.1 MGP_LPJ_G0020507.1 mouse_genomes_project 13 55224166 55229172 - Dbn1 protein_coding processed_transcript MGP_LPJ_T0037087.1 MGP_LPJ_G0020507.1 mouse_genomes_project 13 55224779 55226469 - Dbn1 protein_coding retained_intron MGP_LPJ_T0003449.1 MGP_LPJ_G0003166.1 mouse_genomes_project 13 19474920 19482667 - Gm11280 antisense antisense MGP_LPJ_T0037998.1 MGP_LPJ_G0020821.1 mouse_genomes_project 13 110397839 110402053 + MGP_LPJ_P0037998 Smim15 protein_coding protein_coding MGP_LPJ_T0100269.1 MGP_LPJ_G0038532.1 mouse_genomes_project 13 22091942 22092065 - Gm23340 snoRNA snoRNA MGP_LPJ_T0036663.1 MGP_LPJ_G0020368.1 mouse_genomes_project 13 34404853 34557213 - MGP_LPJ_P0036663 Lyrm4 protein_coding protein_coding MGP_LPJ_T0037667.1 MGP_LPJ_G0020713.1 mouse_genomes_project 13 93621010 93763958 - MGP_LPJ_P0037667 Msh3 protein_coding unknown_likely_coding MGP_LPJ_T0037668.1 MGP_LPJ_G0020713.1 mouse_genomes_project 13 93621704 93773568 - MGP_LPJ_P0037668 Msh3 protein_coding protein_coding MGP_LPJ_T0037669.1 MGP_LPJ_G0020713.1 mouse_genomes_project 13 93621712 93651578 - Msh3 protein_coding processed_transcript MGP_LPJ_T0037670.1 MGP_LPJ_G0020713.1 mouse_genomes_project 13 93621713 93678682 - Msh3 protein_coding retained_intron MGP_LPJ_T0037671.1 MGP_LPJ_G0020713.1 mouse_genomes_project 13 93621714 93773572 - MGP_LPJ_P0037671 Msh3 protein_coding nonsense_mediated_decay MGP_LPJ_T0037672.1 MGP_LPJ_G0020713.1 mouse_genomes_project 13 93621718 93662725 - Msh3 protein_coding retained_intron MGP_LPJ_T0037673.1 MGP_LPJ_G0020713.1 mouse_genomes_project 13 93621718 93773576 - MGP_LPJ_P0037673 Msh3 protein_coding protein_coding MGP_LPJ_T0037674.1 MGP_LPJ_G0020713.1 mouse_genomes_project 13 93622089 93646048 - MGP_LPJ_P0037674 Msh3 protein_coding protein_coding MGP_LPJ_T0037675.1 MGP_LPJ_G0020713.1 mouse_genomes_project 13 93662505 93773558 - MGP_LPJ_P0037675 Msh3 protein_coding nonsense_mediated_decay MGP_LPJ_T0037677.1 MGP_LPJ_G0020713.1 mouse_genomes_project 13 93720693 93722654 - Msh3 protein_coding retained_intron MGP_LPJ_T0037678.1 MGP_LPJ_G0020713.1 mouse_genomes_project 13 93722376 93773569 - MGP_LPJ_P0037678 Msh3 protein_coding nonsense_mediated_decay MGP_LPJ_T0037679.1 MGP_LPJ_G0020713.1 mouse_genomes_project 13 93725848 93764285 - Msh3 protein_coding retained_intron MGP_LPJ_T0037680.1 MGP_LPJ_G0020713.1 mouse_genomes_project 13 93759578 93773088 - Msh3 protein_coding processed_transcript MGP_LPJ_T0037681.1 MGP_LPJ_G0020713.1 mouse_genomes_project 13 93764775 93773526 - Msh3 protein_coding retained_intron MGP_LPJ_T0037682.1 MGP_LPJ_G0020713.1 mouse_genomes_project 13 93769692 93773558 - MGP_LPJ_P0037682 Msh3 protein_coding protein_coding MGP_LPJ_T0037861.1 MGP_LPJ_G0020784.1 mouse_genomes_project 13 102034554 102051903 + MGP_LPJ_P0037861 Smn1 protein_coding protein_coding MGP_LPJ_T0037862.1 MGP_LPJ_G0020784.1 mouse_genomes_project 13 102034560 102036845 + Smn1 protein_coding retained_intron MGP_LPJ_T0037863.1 MGP_LPJ_G0020784.1 mouse_genomes_project 13 102034560 102039108 + MGP_LPJ_P0037863 Smn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0037864.1 MGP_LPJ_G0020784.1 mouse_genomes_project 13 102034596 102051693 + MGP_LPJ_P0037864 Smn1 protein_coding protein_coding MGP_LPJ_T0037865.1 MGP_LPJ_G0020784.1 mouse_genomes_project 13 102034626 102045388 + MGP_LPJ_P0037865 Smn1 protein_coding protein_coding MGP_LPJ_T0037866.1 MGP_LPJ_G0020784.1 mouse_genomes_project 13 102035827 102036638 + Smn1 protein_coding retained_intron MGP_LPJ_T0037867.1 MGP_LPJ_G0020784.1 mouse_genomes_project 13 102039170 102039926 + Smn1 protein_coding retained_intron MGP_LPJ_T0037868.1 MGP_LPJ_G0020784.1 mouse_genomes_project 13 102045216 102051903 + Smn1 protein_coding retained_intron MGP_LPJ_T0037869.1 MGP_LPJ_G0020784.1 mouse_genomes_project 13 102049606 102051663 + Smn1 protein_coding retained_intron MGP_LPJ_T0012929.1 MGP_LPJ_G0011020.1 mouse_genomes_project 13 74747770 74749112 - processed_pseudogene processed_pseudogene MGP_LPJ_T0036952.1 MGP_LPJ_G0020474.1 mouse_genomes_project 13 53849970 53881057 + MGP_LPJ_P0036952 Hrh2 protein_coding protein_coding MGP_LPJ_T0037450.1 MGP_LPJ_G0020653.1 mouse_genomes_project 13 74372477 74389753 - MGP_LPJ_P0037450 Slc6a18 protein_coding protein_coding MGP_LPJ_T0037451.1 MGP_LPJ_G0020653.1 mouse_genomes_project 13 74375862 74389662 - MGP_LPJ_P0037451 Slc6a18 protein_coding protein_coding MGP_LPJ_T0003464.1 MGP_LPJ_G0003177.1 mouse_genomes_project 13 39421800 39431024 + Gm26688 antisense antisense MGP_LPJ_T0036386.1 MGP_LPJ_G0020240.1 mouse_genomes_project 13 20841326 20842223 - MGP_LPJ_P0036386 Vmn1r217 protein_coding protein_coding MGP_LPJ_T0036439.1 MGP_LPJ_G0020277.1 mouse_genomes_project 13 21693712 21694096 - MGP_LPJ_P0036439 Hist1h2ba protein_coding protein_coding MGP_LPJ_T0000921.1 MGP_LPJ_G0000849.1 mouse_genomes_project 13 84832304 84836131 - TEC TEC MGP_LPJ_T0012909.1 MGP_LPJ_G0011000.1 mouse_genomes_project 13 39478704 39479881 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012952.1 MGP_LPJ_G0011043.1 mouse_genomes_project 13 113888415 113888659 + processed_pseudogene processed_pseudogene MGP_LPJ_T0037447.1 MGP_LPJ_G0020650.1 mouse_genomes_project 13 74234399 74278552 + MGP_LPJ_P0037447 Slc6a3 protein_coding protein_coding MGP_LPJ_T0037684.1 MGP_LPJ_G0020716.1 mouse_genomes_project 13 93846317 93862545 + MGP_LPJ_P0037684 Ankrd34b protein_coding protein_coding MGP_LPJ_T0037685.1 MGP_LPJ_G0020716.1 mouse_genomes_project 13 93846762 93858845 + MGP_LPJ_P0037685 Ankrd34b protein_coding protein_coding MGP_LPJ_T0037686.1 MGP_LPJ_G0020716.1 mouse_genomes_project 13 93847079 93861817 + MGP_LPJ_P0037686 Ankrd34b protein_coding protein_coding MGP_LPJ_T0037007.1 MGP_LPJ_G0020486.1 mouse_genomes_project 13 54426716 54442088 - MGP_LPJ_P0037007 Gprin1 protein_coding protein_coding MGP_LPJ_T0037839.1 MGP_LPJ_G0020774.1 mouse_genomes_project 13 100699538 100783675 - MGP_LPJ_P0037839 Tnpo1 protein_coding protein_coding MGP_LPJ_T0037840.1 MGP_LPJ_G0020774.1 mouse_genomes_project 13 100704065 100747370 - MGP_LPJ_P0037840 Tnpo1 protein_coding protein_coding MGP_LPJ_T0037841.1 MGP_LPJ_G0020774.1 mouse_genomes_project 13 100732052 100747386 - MGP_LPJ_P0037841 Tnpo1 protein_coding protein_coding MGP_LPJ_T0037399.1 MGP_LPJ_G0020627.1 mouse_genomes_project 13 68232592 68242721 - MGP_LPJ_P0037399 Gm9894 protein_coding protein_coding MGP_LPJ_T0037046.1 MGP_LPJ_G0020493.1 mouse_genomes_project 13 54826818 54859445 + MGP_LPJ_P0037046 Zfp346 protein_coding protein_coding MGP_LPJ_T0037047.1 MGP_LPJ_G0020493.1 mouse_genomes_project 13 54826821 54847095 + MGP_LPJ_P0037047 Zfp346 protein_coding nonsense_mediated_decay MGP_LPJ_T0037048.1 MGP_LPJ_G0020493.1 mouse_genomes_project 13 54826824 54857001 + MGP_LPJ_P0037048 Zfp346 protein_coding protein_coding MGP_LPJ_T0037049.1 MGP_LPJ_G0020493.1 mouse_genomes_project 13 54826843 54857369 + MGP_LPJ_P0037049 Zfp346 protein_coding nonsense_mediated_decay MGP_LPJ_T0037050.1 MGP_LPJ_G0020493.1 mouse_genomes_project 13 54826843 54855219 + MGP_LPJ_P0037050 Zfp346 protein_coding nonsense_mediated_decay MGP_LPJ_T0037051.1 MGP_LPJ_G0020493.1 mouse_genomes_project 13 54826847 54857110 + MGP_LPJ_P0037051 Zfp346 protein_coding nonsense_mediated_decay MGP_LPJ_T0037052.1 MGP_LPJ_G0020493.1 mouse_genomes_project 13 54826849 54857202 + MGP_LPJ_P0037052 Zfp346 protein_coding nonsense_mediated_decay MGP_LPJ_T0037053.1 MGP_LPJ_G0020493.1 mouse_genomes_project 13 54826909 54856989 + MGP_LPJ_P0037053 Zfp346 protein_coding protein_coding MGP_LPJ_T0037054.1 MGP_LPJ_G0020493.1 mouse_genomes_project 13 54837510 54838393 + Zfp346 protein_coding retained_intron MGP_LPJ_T0037055.1 MGP_LPJ_G0020493.1 mouse_genomes_project 13 54846632 54856970 + Zfp346 protein_coding retained_intron MGP_LPJ_T0037056.1 MGP_LPJ_G0020493.1 mouse_genomes_project 13 54854842 54857244 + Zfp346 protein_coding retained_intron MGP_LPJ_T0037367.1 MGP_LPJ_G0020609.1 mouse_genomes_project 13 67641899 67655841 - MGP_LPJ_P0037367 Zfp458 protein_coding protein_coding MGP_LPJ_T0037828.1 MGP_LPJ_G0020769.1 mouse_genomes_project 13 100162484 100164946 + MGP_LPJ_P0037828 Foxd1 protein_coding protein_coding MGP_LPJ_T0037239.1 MGP_LPJ_G0020552.1 mouse_genomes_project 13 59733879 59748800 - MGP_LPJ_P0037239 protein_coding protein_coding MGP_LPJ_T0037240.1 MGP_LPJ_G0020552.1 mouse_genomes_project 13 59738142 59748766 - protein_coding retained_intron MGP_LPJ_T0037115.1 MGP_LPJ_G0020517.1 mouse_genomes_project 13 55467861 55480825 + MGP_LPJ_P0037115 Txndc15 protein_coding protein_coding MGP_LPJ_T0003525.1 MGP_LPJ_G0003211.1 mouse_genomes_project 13 109040980 109048601 + Gm28989 antisense antisense MGP_LPJ_T0100264.1 MGP_LPJ_G0038527.1 mouse_genomes_project 13 8215776 8215896 - Gm25496 snoRNA snoRNA MGP_LPJ_T0036443.1 MGP_LPJ_G0020280.1 mouse_genomes_project 13 21780599 21874393 - MGP_LPJ_P0036443 Lrrc16a protein_coding nonsense_mediated_decay MGP_LPJ_T0036444.1 MGP_LPJ_G0020280.1 mouse_genomes_project 13 21780739 21790840 - MGP_LPJ_P0036444 Lrrc16a protein_coding protein_coding MGP_LPJ_T0036445.1 MGP_LPJ_G0020280.1 mouse_genomes_project 13 21780914 22052976 - MGP_LPJ_P0036445 Lrrc16a protein_coding protein_coding MGP_LPJ_T0036446.1 MGP_LPJ_G0020280.1 mouse_genomes_project 13 21781316 22052897 - MGP_LPJ_P0036446 Lrrc16a protein_coding protein_coding MGP_LPJ_T0036447.1 MGP_LPJ_G0020280.1 mouse_genomes_project 13 21798102 21822099 - Lrrc16a protein_coding processed_transcript MGP_LPJ_T0036448.1 MGP_LPJ_G0020280.1 mouse_genomes_project 13 21827082 21865616 - Lrrc16a protein_coding retained_intron MGP_LPJ_T0036449.1 MGP_LPJ_G0020280.1 mouse_genomes_project 13 21874368 21878636 - Lrrc16a protein_coding processed_transcript MGP_LPJ_T0036450.1 MGP_LPJ_G0020280.1 mouse_genomes_project 13 21903800 22052971 - Lrrc16a protein_coding retained_intron MGP_LPJ_T0036451.1 MGP_LPJ_G0020280.1 mouse_genomes_project 13 21905324 21922376 - Lrrc16a protein_coding processed_transcript MGP_LPJ_T0036452.1 MGP_LPJ_G0020280.1 mouse_genomes_project 13 21922603 22052667 - MGP_LPJ_P0036452 Lrrc16a protein_coding protein_coding MGP_LPJ_T0036453.1 MGP_LPJ_G0020280.1 mouse_genomes_project 13 21932211 21974579 - MGP_LPJ_P0036453 Lrrc16a protein_coding protein_coding MGP_LPJ_T0036454.1 MGP_LPJ_G0020280.1 mouse_genomes_project 13 21941720 22011072 - Lrrc16a protein_coding processed_transcript MGP_LPJ_T0006529.1 MGP_LPJ_G0005424.1 mouse_genomes_project 13 9506316 9567877 - lincRNA lincRNA MGP_LPJ_T0036921.1 MGP_LPJ_G0020463.1 mouse_genomes_project 13 51370228 51372019 + MGP_LPJ_P0036921 Gadd45g protein_coding protein_coding MGP_LPJ_T0036922.1 MGP_LPJ_G0020463.1 mouse_genomes_project 13 51370294 51371775 + Gadd45g protein_coding retained_intron MGP_LPJ_T0000929.1 MGP_LPJ_G0000857.1 mouse_genomes_project 13 101543711 101544541 + TEC TEC MGP_LPJ_T0037727.1 MGP_LPJ_G0020734.1 mouse_genomes_project 13 95706341 95799299 - MGP_LPJ_P0037727 Scamp1 protein_coding protein_coding MGP_LPJ_T0037728.1 MGP_LPJ_G0020734.1 mouse_genomes_project 13 95726461 95778611 - MGP_LPJ_P0037728 Scamp1 protein_coding protein_coding MGP_LPJ_T0098369.1 MGP_LPJ_G0036650.1 mouse_genomes_project 13 31897813 31898025 + Gm25043 ribozyme ribozyme MGP_LPJ_T0037333.1 MGP_LPJ_G0020595.1 mouse_genomes_project 13 65562608 65563756 + MGP_LPJ_P0037333 Gm10775 protein_coding protein_coding MGP_LPJ_T0036363.1 MGP_LPJ_G0020217.1 mouse_genomes_project 13 19755432 19756335 - MGP_LPJ_P0036363 Vmn1r192 protein_coding protein_coding MGP_LPJ_T0036428.1 MGP_LPJ_G0020272.1 mouse_genomes_project 13 21536711 21545677 + MGP_LPJ_P0036428 Trim38 protein_coding protein_coding MGP_LPJ_T0037131.1 MGP_LPJ_G0020523.1 mouse_genomes_project 13 56045681 56047301 - MGP_LPJ_P0037131 Neurog1 protein_coding protein_coding MGP_LPJ_T0036859.1 MGP_LPJ_G0020441.1 mouse_genomes_project 13 48532554 48577929 + MGP_LPJ_P0036859 Bicd2 protein_coding protein_coding MGP_LPJ_T0036860.1 MGP_LPJ_G0020441.1 mouse_genomes_project 13 48532554 48577929 + MGP_LPJ_P0036860 Bicd2 protein_coding protein_coding MGP_LPJ_T0036861.1 MGP_LPJ_G0020441.1 mouse_genomes_project 13 48532554 48577929 + MGP_LPJ_P0036861 Bicd2 protein_coding protein_coding MGP_LPJ_T0036327.1 MGP_LPJ_G0020190.1 mouse_genomes_project 13 19189438 19190387 - MGP_LPJ_P0036327 protein_coding protein_coding MGP_LPJ_T0037846.1 MGP_LPJ_G0020779.1 mouse_genomes_project 13 101305048 101408332 - MGP_LPJ_P0037846 Map1b protein_coding protein_coding MGP_LPJ_T0101841.1 MGP_LPJ_G0039878.1 mouse_genomes_project 13 20695231 20696158 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0037896.1 MGP_LPJ_G0020793.1 mouse_genomes_project 13 102699903 102709702 - MGP_LPJ_P0037896 Mrps36 protein_coding protein_coding MGP_LPJ_T0037897.1 MGP_LPJ_G0020793.1 mouse_genomes_project 13 102700109 102709700 - MGP_LPJ_P0037897 Mrps36 protein_coding protein_coding MGP_LPJ_T0037898.1 MGP_LPJ_G0020793.1 mouse_genomes_project 13 102700161 102709174 - Mrps36 protein_coding processed_transcript MGP_LPJ_T0037899.1 MGP_LPJ_G0020793.1 mouse_genomes_project 13 102700184 102709631 - Mrps36 protein_coding processed_transcript MGP_LPJ_T0037900.1 MGP_LPJ_G0020793.1 mouse_genomes_project 13 102700212 102709157 - Mrps36 protein_coding processed_transcript MGP_LPJ_T0037901.1 MGP_LPJ_G0020793.1 mouse_genomes_project 13 102708450 102709156 - Mrps36 protein_coding processed_transcript MGP_LPJ_T0006651.1 MGP_LPJ_G0005510.1 mouse_genomes_project 13 110017353 110022128 + 1700006H21Rik lincRNA lincRNA MGP_LPJ_T0006652.1 MGP_LPJ_G0005510.1 mouse_genomes_project 13 110017353 110022117 + 1700006H21Rik lincRNA lincRNA MGP_LPJ_T0037394.1 MGP_LPJ_G0020623.1 mouse_genomes_project 13 68122844 68130869 - MGP_LPJ_P0037394 protein_coding protein_coding MGP_LPJ_T0006595.1 MGP_LPJ_G0005468.1 mouse_genomes_project 13 53009931 53020693 - Gm43262 lincRNA lincRNA MGP_LPJ_T0000912.1 MGP_LPJ_G0000840.1 mouse_genomes_project 13 39441640 39444278 - TEC TEC MGP_LPJ_T0036687.1 MGP_LPJ_G0020377.1 mouse_genomes_project 13 36715020 36771014 + MGP_LPJ_P0036687 Dsp protein_coding protein_coding MGP_LPJ_T0036688.1 MGP_LPJ_G0020377.1 mouse_genomes_project 13 36715040 36771014 + MGP_LPJ_P0036688 Dsp protein_coding protein_coding MGP_LPJ_T0036689.1 MGP_LPJ_G0020377.1 mouse_genomes_project 13 36749870 36753737 + Dsp protein_coding processed_transcript MGP_LPJ_T0037103.1 MGP_LPJ_G0020512.1 mouse_genomes_project 13 55338209 55342764 + MGP_LPJ_P0037103 Tmed9 protein_coding protein_coding MGP_LPJ_T0012903.1 MGP_LPJ_G0010994.1 mouse_genomes_project 13 29335357 29335928 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003446.1 MGP_LPJ_G0003163.1 mouse_genomes_project 13 12678547 12679863 - Gm26645 antisense antisense MGP_LPJ_T0098151.1 MGP_LPJ_G0036432.1 mouse_genomes_project 13 195225 195339 + Gm23084 rRNA rRNA MGP_LPJ_T0006550.1 MGP_LPJ_G0005440.1 mouse_genomes_project 13 29470877 29472053 - Gm11373 lincRNA lincRNA MGP_LPJ_T0000911.1 MGP_LPJ_G0000839.1 mouse_genomes_project 13 37896389 37896752 + TEC TEC MGP_LPJ_T0036092.1 MGP_LPJ_G0020106.1 mouse_genomes_project 13 797116 819665 + MGP_LPJ_P0036092 Akr1c19 protein_coding protein_coding MGP_LPJ_T0036093.1 MGP_LPJ_G0020106.1 mouse_genomes_project 13 802523 819664 + MGP_LPJ_P0036093 Akr1c19 protein_coding protein_coding MGP_LPJ_T0036094.1 MGP_LPJ_G0020106.1 mouse_genomes_project 13 802554 819151 + MGP_LPJ_P0036094 Akr1c19 protein_coding unknown_likely_coding MGP_LPJ_T0036095.1 MGP_LPJ_G0020106.1 mouse_genomes_project 13 814641 819986 + Akr1c19 protein_coding processed_transcript MGP_LPJ_T0037645.1 MGP_LPJ_G0020708.1 mouse_genomes_project 13 92863572 93101351 + Ssbp2 protein_coding processed_transcript MGP_LPJ_T0037646.1 MGP_LPJ_G0020708.1 mouse_genomes_project 13 92864339 93117131 + MGP_LPJ_P0037646 Ssbp2 protein_coding protein_coding MGP_LPJ_T0037647.1 MGP_LPJ_G0020708.1 mouse_genomes_project 13 92864380 93114935 + MGP_LPJ_P0037647 Ssbp2 protein_coding protein_coding MGP_LPJ_T0037648.1 MGP_LPJ_G0020708.1 mouse_genomes_project 13 92864416 92949783 + MGP_LPJ_P0037648 Ssbp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0037649.1 MGP_LPJ_G0020708.1 mouse_genomes_project 13 92864449 93086523 + Ssbp2 protein_coding retained_intron MGP_LPJ_T0037650.1 MGP_LPJ_G0020708.1 mouse_genomes_project 13 92864452 92972530 + Ssbp2 protein_coding retained_intron MGP_LPJ_T0037651.1 MGP_LPJ_G0020708.1 mouse_genomes_project 13 92864470 92934310 + Ssbp2 protein_coding retained_intron MGP_LPJ_T0037652.1 MGP_LPJ_G0020708.1 mouse_genomes_project 13 92864476 93114395 + MGP_LPJ_P0037652 Ssbp2 protein_coding unknown_likely_coding MGP_LPJ_T0037653.1 MGP_LPJ_G0020708.1 mouse_genomes_project 13 93084550 93103765 + Ssbp2 protein_coding retained_intron MGP_LPJ_T0009956.1 MGP_LPJ_G0008074.1 mouse_genomes_project 13 58302586 58302694 - Mir7-1 miRNA miRNA MGP_LPJ_T0012865.1 MGP_LPJ_G0010956.1 mouse_genomes_project 13 18873173 18873613 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098159.1 MGP_LPJ_G0036440.1 mouse_genomes_project 13 119548098 119548189 + Gm23198 rRNA rRNA MGP_LPJ_T0037767.1 MGP_LPJ_G0020750.1 mouse_genomes_project 13 97725100 97725949 + Gm17190 protein_coding translated_processed_pseudogene MGP_LPJ_T0037768.1 MGP_LPJ_G0020750.1 mouse_genomes_project 13 97725169 97726513 + MGP_LPJ_P0037768 Gm17190 protein_coding protein_coding MGP_LPJ_T0037885.1 MGP_LPJ_G0020788.1 mouse_genomes_project 13 102533626 102555782 - MGP_LPJ_P0037885 Marveld2 protein_coding protein_coding MGP_LPJ_T0037886.1 MGP_LPJ_G0020788.1 mouse_genomes_project 13 102533626 102555755 - MGP_LPJ_P0037886 Marveld2 protein_coding protein_coding MGP_LPJ_T0037887.1 MGP_LPJ_G0020788.1 mouse_genomes_project 13 102534899 102555722 - MGP_LPJ_P0037887 Marveld2 protein_coding protein_coding MGP_LPJ_T0009947.1 MGP_LPJ_G0008065.1 mouse_genomes_project 13 47674583 47674677 - Mirlet7a-1 miRNA miRNA MGP_LPJ_T0009980.1 MGP_LPJ_G0008098.1 mouse_genomes_project 13 115676754 115676863 + Mir449c miRNA miRNA MGP_LPJ_T0012890.1 MGP_LPJ_G0010981.1 mouse_genomes_project 13 24032655 24033172 + processed_pseudogene processed_pseudogene MGP_LPJ_T0037404.1 MGP_LPJ_G0020630.1 mouse_genomes_project 13 68355733 68356331 + MGP_LPJ_P0037404 BC048507 protein_coding protein_coding MGP_LPJ_T0036635.1 MGP_LPJ_G0020358.1 mouse_genomes_project 13 32987619 33012282 - MGP_LPJ_P0036635 Pxdc1 protein_coding protein_coding MGP_LPJ_T0036636.1 MGP_LPJ_G0020358.1 mouse_genomes_project 13 32987619 33012292 - MGP_LPJ_P0036636 Pxdc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0036637.1 MGP_LPJ_G0020358.1 mouse_genomes_project 13 32987620 33012292 - MGP_LPJ_P0036637 Pxdc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0036638.1 MGP_LPJ_G0020358.1 mouse_genomes_project 13 32988658 33008181 - MGP_LPJ_P0036638 Pxdc1 protein_coding protein_coding MGP_LPJ_T0036565.1 MGP_LPJ_G0020327.1 mouse_genomes_project 13 29107872 29109645 + MGP_LPJ_P0036565 Gm5447 protein_coding protein_coding MGP_LPJ_T0009927.1 MGP_LPJ_G0008045.1 mouse_genomes_project 13 2637426 2637543 - Gm26259 miRNA miRNA MGP_LPJ_T0037288.1 MGP_LPJ_G0020576.1 mouse_genomes_project 13 63759516 63820255 - MGP_LPJ_P0037288 Ptch1 protein_coding protein_coding MGP_LPJ_T0037289.1 MGP_LPJ_G0020576.1 mouse_genomes_project 13 63759517 63829636 - MGP_LPJ_P0037289 Ptch1 protein_coding nonsense_mediated_decay MGP_LPJ_T0037290.1 MGP_LPJ_G0020576.1 mouse_genomes_project 13 63764942 63765673 - Ptch1 protein_coding retained_intron MGP_LPJ_T0037291.1 MGP_LPJ_G0020576.1 mouse_genomes_project 13 63769246 63818550 - MGP_LPJ_P0037291 Ptch1 protein_coding nonsense_mediated_decay MGP_LPJ_T0037292.1 MGP_LPJ_G0020576.1 mouse_genomes_project 13 63796633 63829774 - MGP_LPJ_P0037292 Ptch1 protein_coding protein_coding MGP_LPJ_T0037293.1 MGP_LPJ_G0020576.1 mouse_genomes_project 13 63796633 63820009 - MGP_LPJ_P0037293 Ptch1 protein_coding protein_coding MGP_LPJ_T0037294.1 MGP_LPJ_G0020576.1 mouse_genomes_project 13 63796633 63819061 - MGP_LPJ_P0037294 Ptch1 protein_coding protein_coding MGP_LPJ_T0036079.1 MGP_LPJ_G0020097.1 mouse_genomes_project 13 337970 339400 - MGP_LPJ_P0036079 Calml3 protein_coding protein_coding MGP_LPJ_T0006538.1 MGP_LPJ_G0005432.1 mouse_genomes_project 13 24117747 24148035 - 1700092E19Rik lincRNA lincRNA MGP_LPJ_T0006539.1 MGP_LPJ_G0005432.1 mouse_genomes_project 13 24141482 24147976 - 1700092E19Rik lincRNA lincRNA MGP_LPJ_T0098157.1 MGP_LPJ_G0036438.1 mouse_genomes_project 13 105503116 105503221 + n-R5s56 rRNA rRNA MGP_LPJ_T0036708.1 MGP_LPJ_G0020388.1 mouse_genomes_project 13 39717563 39730974 + MGP_LPJ_P0036708 Pak1ip1 protein_coding protein_coding MGP_LPJ_T0036709.1 MGP_LPJ_G0020388.1 mouse_genomes_project 13 39717564 39726576 + Pak1ip1 protein_coding retained_intron MGP_LPJ_T0036710.1 MGP_LPJ_G0020388.1 mouse_genomes_project 13 39717778 39730966 + Pak1ip1 protein_coding retained_intron MGP_LPJ_T0036711.1 MGP_LPJ_G0020388.1 mouse_genomes_project 13 39717800 39726225 + Pak1ip1 protein_coding processed_transcript MGP_LPJ_T0036712.1 MGP_LPJ_G0020388.1 mouse_genomes_project 13 39717806 39730978 + Pak1ip1 protein_coding retained_intron MGP_LPJ_T0012902.1 MGP_LPJ_G0010993.1 mouse_genomes_project 13 29144170 29144832 + processed_pseudogene processed_pseudogene MGP_LPJ_T0036729.1 MGP_LPJ_G0020399.1 mouse_genomes_project 13 40523033 40617581 - MGP_LPJ_P0036729 Adtrp protein_coding protein_coding MGP_LPJ_T0036730.1 MGP_LPJ_G0020399.1 mouse_genomes_project 13 40524018 40617777 - MGP_LPJ_P0036730 Adtrp protein_coding protein_coding MGP_LPJ_T0036731.1 MGP_LPJ_G0020399.1 mouse_genomes_project 13 40524475 40617709 - MGP_LPJ_P0036731 Adtrp protein_coding protein_coding MGP_LPJ_T0036732.1 MGP_LPJ_G0020399.1 mouse_genomes_project 13 40537398 40594037 - MGP_LPJ_P0036732 Adtrp protein_coding protein_coding MGP_LPJ_T0037697.1 MGP_LPJ_G0020723.1 mouse_genomes_project 13 94485420 94591282 - MGP_LPJ_P0037697 Cmya5 protein_coding protein_coding MGP_LPJ_T0037374.1 MGP_LPJ_G0020612.1 mouse_genomes_project 13 67697033 67738477 - MGP_LPJ_P0037374 Gm28044 protein_coding nonsense_mediated_decay MGP_LPJ_T0037375.1 MGP_LPJ_G0020612.1 mouse_genomes_project 13 67700641 67727513 - Gm28044 protein_coding processed_transcript MGP_LPJ_T0036292.1 MGP_LPJ_G0020172.1 mouse_genomes_project 13 18808280 18815895 + MGP_LPJ_P0036292 Gpx6 protein_coding protein_coding MGP_LPJ_T0036293.1 MGP_LPJ_G0020172.1 mouse_genomes_project 13 18813534 18815899 + Gpx6 protein_coding processed_transcript MGP_LPJ_T0098152.1 MGP_LPJ_G0036433.1 mouse_genomes_project 13 11280833 11280946 - n-R5s52 rRNA rRNA MGP_LPJ_T0012884.1 MGP_LPJ_G0010975.1 mouse_genomes_project 13 22189722 22190057 - processed_pseudogene processed_pseudogene MGP_LPJ_T0037729.1 MGP_LPJ_G0020735.1 mouse_genomes_project 13 95867767 95872211 - MGP_LPJ_P0037729 Gm9776 protein_coding protein_coding MGP_LPJ_T0036957.1 MGP_LPJ_G0020477.1 mouse_genomes_project 13 54179296 54228114 + MGP_LPJ_P0036957 Simc1 protein_coding protein_coding MGP_LPJ_T0036958.1 MGP_LPJ_G0020477.1 mouse_genomes_project 13 54179296 54228114 + MGP_LPJ_P0036958 Simc1 protein_coding protein_coding MGP_LPJ_T0036959.1 MGP_LPJ_G0020477.1 mouse_genomes_project 13 54179321 54217261 + MGP_LPJ_P0036959 Simc1 protein_coding protein_coding MGP_LPJ_T0036960.1 MGP_LPJ_G0020477.1 mouse_genomes_project 13 54179326 54217260 + MGP_LPJ_P0036960 Simc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0036961.1 MGP_LPJ_G0020477.1 mouse_genomes_project 13 54187588 54200474 + Simc1 protein_coding processed_transcript MGP_LPJ_T0036962.1 MGP_LPJ_G0020477.1 mouse_genomes_project 13 54205151 54217377 + Simc1 protein_coding retained_intron MGP_LPJ_T0036963.1 MGP_LPJ_G0020477.1 mouse_genomes_project 13 54223491 54227610 + Simc1 protein_coding retained_intron MGP_LPJ_T0101857.1 MGP_LPJ_G0039894.1 mouse_genomes_project 13 31981494 31981653 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0003455.1 MGP_LPJ_G0003171.1 mouse_genomes_project 13 21715442 21724944 + Gm11339 antisense antisense MGP_LPJ_T0036510.1 MGP_LPJ_G0020300.1 mouse_genomes_project 13 25146142 25161921 + MGP_LPJ_P0036510 Prl3a1 protein_coding protein_coding MGP_LPJ_T0036645.1 MGP_LPJ_G0020364.1 mouse_genomes_project 13 33376051 33402522 - MGP_LPJ_P0036645 Eci2 protein_coding protein_coding MGP_LPJ_T0036646.1 MGP_LPJ_G0020364.1 mouse_genomes_project 13 33376052 33402505 - MGP_LPJ_P0036646 Eci2 protein_coding protein_coding MGP_LPJ_T0036647.1 MGP_LPJ_G0020364.1 mouse_genomes_project 13 33376053 33402522 - MGP_LPJ_P0036647 Eci2 protein_coding protein_coding MGP_LPJ_T0036648.1 MGP_LPJ_G0020364.1 mouse_genomes_project 13 33376060 33402510 - MGP_LPJ_P0036648 Eci2 protein_coding protein_coding MGP_LPJ_T0036649.1 MGP_LPJ_G0020364.1 mouse_genomes_project 13 33376214 33402315 - MGP_LPJ_P0036649 Eci2 protein_coding unknown_likely_coding MGP_LPJ_T0036650.1 MGP_LPJ_G0020364.1 mouse_genomes_project 13 33377332 33389831 - Eci2 protein_coding processed_transcript MGP_LPJ_T0036651.1 MGP_LPJ_G0020364.1 mouse_genomes_project 13 33378886 33390574 - Eci2 protein_coding processed_transcript MGP_LPJ_T0036652.1 MGP_LPJ_G0020364.1 mouse_genomes_project 13 33386904 33389365 - Eci2 protein_coding retained_intron MGP_LPJ_T0036653.1 MGP_LPJ_G0020364.1 mouse_genomes_project 13 33387156 33402501 - MGP_LPJ_P0036653 Eci2 protein_coding protein_coding MGP_LPJ_T0036654.1 MGP_LPJ_G0020364.1 mouse_genomes_project 13 33388533 33402500 - MGP_LPJ_P0036654 Eci2 protein_coding protein_coding MGP_LPJ_T0037441.1 MGP_LPJ_G0020649.1 mouse_genomes_project 13 74163506 74213364 + MGP_LPJ_P0037441 Lpcat1 protein_coding nonsense_mediated_decay MGP_LPJ_T0037442.1 MGP_LPJ_G0020649.1 mouse_genomes_project 13 74163506 74213364 + MGP_LPJ_P0037442 Lpcat1 protein_coding protein_coding MGP_LPJ_T0037443.1 MGP_LPJ_G0020649.1 mouse_genomes_project 13 74163540 74212054 + MGP_LPJ_P0037443 Lpcat1 protein_coding nonsense_mediated_decay MGP_LPJ_T0037444.1 MGP_LPJ_G0020649.1 mouse_genomes_project 13 74163732 74198640 + Lpcat1 protein_coding retained_intron MGP_LPJ_T0037445.1 MGP_LPJ_G0020649.1 mouse_genomes_project 13 74199811 74210783 + Lpcat1 protein_coding retained_intron MGP_LPJ_T0037446.1 MGP_LPJ_G0020649.1 mouse_genomes_project 13 74207892 74208550 + Lpcat1 protein_coding retained_intron MGP_LPJ_T0006531.1 MGP_LPJ_G0005426.1 mouse_genomes_project 13 21003649 21008162 + 4933404K08Rik lincRNA lincRNA MGP_LPJ_T0036392.1 MGP_LPJ_G0020243.1 mouse_genomes_project 13 21149844 21152167 - MGP_LPJ_P0036392 Abt1 protein_coding protein_coding MGP_LPJ_T0038138.1 MGP_LPJ_G0020871.1 mouse_genomes_project 13 122450827 122474973 + MGP_LPJ_P0038138 4833420G17Rik protein_coding unknown_likely_coding MGP_LPJ_T0009928.1 MGP_LPJ_G0008046.1 mouse_genomes_project 13 3834122 3834232 - Gm22689 miRNA miRNA MGP_LPJ_T0017302.1 MGP_LPJ_G0015171.1 mouse_genomes_project 13 70170375 70174779 - Gm17108 processed_transcript processed_transcript MGP_LPJ_T0037324.1 MGP_LPJ_G0020589.1 mouse_genomes_project 13 65328328 65333259 + MGP_LPJ_P0037324 Spata31d1c protein_coding protein_coding MGP_LPJ_T0002611.1 MGP_LPJ_G0002508.1 mouse_genomes_project 13 16574661 16575130 + MGP_LPJ_P0002611 Tcrg-V7 TR_V_gene TR_V_gene MGP_LPJ_T0036388.1 MGP_LPJ_G0020242.1 mouse_genomes_project 13 21079802 21095202 - MGP_LPJ_P0036388 Zfp322a protein_coding protein_coding MGP_LPJ_T0036389.1 MGP_LPJ_G0020242.1 mouse_genomes_project 13 21084686 21094994 - MGP_LPJ_P0036389 Zfp322a protein_coding protein_coding MGP_LPJ_T0036390.1 MGP_LPJ_G0020242.1 mouse_genomes_project 13 21084687 21095195 - MGP_LPJ_P0036390 Zfp322a protein_coding protein_coding MGP_LPJ_T0036391.1 MGP_LPJ_G0020242.1 mouse_genomes_project 13 21084848 21095188 - MGP_LPJ_P0036391 Zfp322a protein_coding protein_coding MGP_LPJ_T0037902.1 MGP_LPJ_G0020794.1 mouse_genomes_project 13 102725095 102743013 - MGP_LPJ_P0037902 Cenph protein_coding protein_coding MGP_LPJ_T0037903.1 MGP_LPJ_G0020794.1 mouse_genomes_project 13 102739306 102742897 - Cenph protein_coding retained_intron MGP_LPJ_T0037473.1 MGP_LPJ_G0020663.1 mouse_genomes_project 13 74850223 74895902 + MGP_LPJ_P0037473 Slc9a3 protein_coding unknown_likely_coding MGP_LPJ_T0037474.1 MGP_LPJ_G0020663.1 mouse_genomes_project 13 74850223 74894803 + MGP_LPJ_P0037474 Slc9a3 protein_coding protein_coding MGP_LPJ_T0003465.1 MGP_LPJ_G0003178.1 mouse_genomes_project 13 40562050 40563063 + 1700061E18Rik antisense antisense MGP_LPJ_T0037954.1 MGP_LPJ_G0020805.1 mouse_genomes_project 13 106294819 106319339 + MGP_LPJ_P0037954 Trim23 protein_coding protein_coding MGP_LPJ_T0037955.1 MGP_LPJ_G0020805.1 mouse_genomes_project 13 106294861 106319694 + MGP_LPJ_P0037955 Trim23 protein_coding protein_coding MGP_LPJ_T0037956.1 MGP_LPJ_G0020805.1 mouse_genomes_project 13 106294883 106305738 + MGP_LPJ_P0037956 Trim23 protein_coding nonsense_mediated_decay MGP_LPJ_T0037957.1 MGP_LPJ_G0020805.1 mouse_genomes_project 13 106295120 106318370 + MGP_LPJ_P0037957 Trim23 protein_coding protein_coding MGP_LPJ_T0036867.1 MGP_LPJ_G0020446.1 mouse_genomes_project 13 48784805 48795845 + MGP_LPJ_P0036867 Omd protein_coding protein_coding MGP_LPJ_T0009933.1 MGP_LPJ_G0008051.1 mouse_genomes_project 13 19269935 19270067 + Gm44454 miRNA miRNA MGP_LPJ_T0036856.1 MGP_LPJ_G0020440.1 mouse_genomes_project 13 48450218 48499240 - MGP_LPJ_P0036856 Fgd3 protein_coding protein_coding MGP_LPJ_T0036857.1 MGP_LPJ_G0020440.1 mouse_genomes_project 13 48451674 48487583 - MGP_LPJ_P0036857 Fgd3 protein_coding protein_coding MGP_LPJ_T0036858.1 MGP_LPJ_G0020440.1 mouse_genomes_project 13 48461946 48510516 - MGP_LPJ_P0036858 Fgd3 protein_coding protein_coding MGP_LPJ_T0036352.1 MGP_LPJ_G0020209.1 mouse_genomes_project 13 19550760 19558342 - MGP_LPJ_P0036352 Prss16 protein_coding protein_coding MGP_LPJ_T0036353.1 MGP_LPJ_G0020209.1 mouse_genomes_project 13 19551144 19553815 - Prss16 protein_coding processed_transcript MGP_LPJ_T0036354.1 MGP_LPJ_G0020209.1 mouse_genomes_project 13 19551511 19555013 - Prss16 protein_coding processed_transcript MGP_LPJ_T0036355.1 MGP_LPJ_G0020209.1 mouse_genomes_project 13 19555822 19558343 - Prss16 protein_coding processed_transcript MGP_LPJ_T0037662.1 MGP_LPJ_G0020712.1 mouse_genomes_project 13 93291661 93538063 - MGP_LPJ_P0037662 Rasgrf2 protein_coding protein_coding MGP_LPJ_T0037663.1 MGP_LPJ_G0020712.1 mouse_genomes_project 13 93295688 93538063 - MGP_LPJ_P0037663 Rasgrf2 protein_coding protein_coding MGP_LPJ_T0037664.1 MGP_LPJ_G0020712.1 mouse_genomes_project 13 93370984 93401655 - MGP_LPJ_P0037664 Rasgrf2 protein_coding protein_coding MGP_LPJ_T0037665.1 MGP_LPJ_G0020712.1 mouse_genomes_project 13 93431866 93434275 - MGP_LPJ_P0037665 Rasgrf2 protein_coding protein_coding MGP_LPJ_T0037666.1 MGP_LPJ_G0020712.1 mouse_genomes_project 13 93431866 93538225 - MGP_LPJ_P0037666 Rasgrf2 protein_coding protein_coding MGP_LPJ_T0036084.1 MGP_LPJ_G0020102.1 mouse_genomes_project 13 505702 510373 - MGP_LPJ_P0036084 Ucn3 protein_coding protein_coding MGP_LPJ_T0101854.1 MGP_LPJ_G0039891.1 mouse_genomes_project 13 31472544 31480109 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0101821.1 MGP_LPJ_G0039858.1 mouse_genomes_project 13 19647059 19647517 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0037332.1 MGP_LPJ_G0020594.1 mouse_genomes_project 13 65474753 65496972 - MGP_LPJ_P0037332 Nlrp4f protein_coding protein_coding MGP_LPJ_T0037844.1 MGP_LPJ_G0020777.1 mouse_genomes_project 13 101202499 101228072 - MGP_LPJ_P0037844 Ptcd2 protein_coding protein_coding MGP_LPJ_T0098153.1 MGP_LPJ_G0036434.1 mouse_genomes_project 13 21426976 21427084 - Gm24991 rRNA rRNA MGP_LPJ_T0036833.1 MGP_LPJ_G0020436.1 mouse_genomes_project 13 48215539 48329141 - MGP_LPJ_P0036833 Wnk2 protein_coding protein_coding MGP_LPJ_T0036834.1 MGP_LPJ_G0020436.1 mouse_genomes_project 13 48215539 48329141 - MGP_LPJ_P0036834 Wnk2 protein_coding protein_coding MGP_LPJ_T0036835.1 MGP_LPJ_G0020436.1 mouse_genomes_project 13 48215539 48329141 - MGP_LPJ_P0036835 Wnk2 protein_coding protein_coding MGP_LPJ_T0036836.1 MGP_LPJ_G0020436.1 mouse_genomes_project 13 48215539 48329139 - MGP_LPJ_P0036836 Wnk2 protein_coding protein_coding MGP_LPJ_T0036837.1 MGP_LPJ_G0020436.1 mouse_genomes_project 13 48215545 48328359 - MGP_LPJ_P0036837 Wnk2 protein_coding protein_coding MGP_LPJ_T0036838.1 MGP_LPJ_G0020436.1 mouse_genomes_project 13 48215546 48328359 - MGP_LPJ_P0036838 Wnk2 protein_coding protein_coding MGP_LPJ_T0036839.1 MGP_LPJ_G0020436.1 mouse_genomes_project 13 48216845 48239832 - MGP_LPJ_P0036839 Wnk2 protein_coding protein_coding MGP_LPJ_T0036840.1 MGP_LPJ_G0020436.1 mouse_genomes_project 13 48216856 48256978 - MGP_LPJ_P0036840 Wnk2 protein_coding protein_coding MGP_LPJ_T0036841.1 MGP_LPJ_G0020436.1 mouse_genomes_project 13 48217217 48329141 - MGP_LPJ_P0036841 Wnk2 protein_coding protein_coding MGP_LPJ_T0036842.1 MGP_LPJ_G0020436.1 mouse_genomes_project 13 48218110 48329141 - MGP_LPJ_P0036842 Wnk2 protein_coding protein_coding MGP_LPJ_T0036843.1 MGP_LPJ_G0020436.1 mouse_genomes_project 13 48240277 48249958 - MGP_LPJ_P0036843 Wnk2 protein_coding nonsense_mediated_decay MGP_LPJ_T0101488.1 MGP_LPJ_G0039630.1 mouse_genomes_project 13 21369371 21369691 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0012928.1 MGP_LPJ_G0011019.1 mouse_genomes_project 13 74549819 74550263 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012858.1 MGP_LPJ_G0010949.1 mouse_genomes_project 13 5881456 5881607 - processed_pseudogene processed_pseudogene MGP_LPJ_T0036578.1 MGP_LPJ_G0020334.1 mouse_genomes_project 13 31010452 31030727 + MGP_LPJ_P0036578 Wrnip1 protein_coding protein_coding MGP_LPJ_T0037913.1 MGP_LPJ_G0020798.1 mouse_genomes_project 13 104765697 104781918 + MGP_LPJ_P0037913 Cd180 protein_coding protein_coding MGP_LPJ_T0037914.1 MGP_LPJ_G0020798.1 mouse_genomes_project 13 104765704 104777527 + MGP_LPJ_P0037914 Cd180 protein_coding protein_coding MGP_LPJ_T0037915.1 MGP_LPJ_G0020798.1 mouse_genomes_project 13 104765712 104778331 + MGP_LPJ_P0037915 Cd180 protein_coding protein_coding MGP_LPJ_T0037916.1 MGP_LPJ_G0020798.1 mouse_genomes_project 13 104765718 104814244 + MGP_LPJ_P0037916 Cd180 protein_coding protein_coding MGP_LPJ_T0037917.1 MGP_LPJ_G0020798.1 mouse_genomes_project 13 104765750 104814119 + MGP_LPJ_P0037917 Cd180 protein_coding protein_coding MGP_LPJ_T0017283.1 MGP_LPJ_G0015160.1 mouse_genomes_project 13 19565970 19567525 + Gm11291 processed_transcript processed_transcript MGP_LPJ_T0038075.1 MGP_LPJ_G0020842.1 mouse_genomes_project 13 115561412 115603358 + MGP_LPJ_P0038075 Dhx29 protein_coding protein_coding MGP_LPJ_T0100291.1 MGP_LPJ_G0038554.1 mouse_genomes_project 13 77428266 77428398 - Gm24519 snoRNA snoRNA MGP_LPJ_T0036318.1 MGP_LPJ_G0020184.1 mouse_genomes_project 13 19058838 19059825 - MGP_LPJ_P0036318 protein_coding protein_coding MGP_LPJ_T0101839.1 MGP_LPJ_G0039876.1 mouse_genomes_project 13 20619601 20619838 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0006629.1 MGP_LPJ_G0005492.1 mouse_genomes_project 13 85138038 85178902 - Gm17750 lincRNA lincRNA MGP_LPJ_T0037676.1 MGP_LPJ_G0020714.1 mouse_genomes_project 13 93719177 93720380 + MGP_LPJ_P0037676 Gm20379 protein_coding protein_coding MGP_LPJ_T0037352.1 MGP_LPJ_G0020601.1 mouse_genomes_project 13 67383155 67403961 - MGP_LPJ_P0037352 Zfp712 protein_coding protein_coding MGP_LPJ_T0012948.1 MGP_LPJ_G0011039.1 mouse_genomes_project 13 103015217 103016185 - processed_pseudogene processed_pseudogene MGP_LPJ_T0037715.1 MGP_LPJ_G0020729.1 mouse_genomes_project 13 95139782 95157513 - MGP_LPJ_P0037715 unknown_likely_coding unknown_likely_coding MGP_LPJ_T0037640.1 MGP_LPJ_G0020705.1 mouse_genomes_project 13 92257442 92282341 - MGP_LPJ_P0037640 Atp6ap1l protein_coding nonsense_mediated_decay MGP_LPJ_T0037641.1 MGP_LPJ_G0020705.1 mouse_genomes_project 13 92257554 92282326 - MGP_LPJ_P0037641 Atp6ap1l protein_coding protein_coding MGP_LPJ_T0037642.1 MGP_LPJ_G0020705.1 mouse_genomes_project 13 92272696 92282369 - Atp6ap1l protein_coding processed_transcript MGP_LPJ_T0012872.1 MGP_LPJ_G0010963.1 mouse_genomes_project 13 19731350 19733147 - processed_pseudogene processed_pseudogene MGP_LPJ_T0037883.1 MGP_LPJ_G0020787.1 mouse_genomes_project 13 102441527 102495344 - MGP_LPJ_P0037883 Ocln protein_coding protein_coding MGP_LPJ_T0037884.1 MGP_LPJ_G0020787.1 mouse_genomes_project 13 102454008 102495215 - MGP_LPJ_P0037884 Ocln protein_coding protein_coding MGP_LPJ_T0037424.1 MGP_LPJ_G0020641.1 mouse_genomes_project 13 71317617 71435656 - MGP_LPJ_P0037424 Adamts16 protein_coding protein_coding MGP_LPJ_T0037425.1 MGP_LPJ_G0020641.1 mouse_genomes_project 13 71317625 71435620 - MGP_LPJ_P0037425 Adamts16 protein_coding nonsense_mediated_decay MGP_LPJ_T0037426.1 MGP_LPJ_G0020641.1 mouse_genomes_project 13 71351125 71435656 - MGP_LPJ_P0037426 Adamts16 protein_coding protein_coding MGP_LPJ_T0037427.1 MGP_LPJ_G0020641.1 mouse_genomes_project 13 71427895 71435653 - Adamts16 protein_coding retained_intron MGP_LPJ_T0037390.1 MGP_LPJ_G0020621.1 mouse_genomes_project 13 67950308 67978993 - MGP_LPJ_P0037390 Zfp748 protein_coding protein_coding MGP_LPJ_T0037391.1 MGP_LPJ_G0020621.1 mouse_genomes_project 13 67970797 67978993 - MGP_LPJ_P0037391 Zfp748 protein_coding protein_coding MGP_LPJ_T0002526.1 MGP_LPJ_G0002429.1 mouse_genomes_project 13 16759173 16759234 + MGP_LPJ_P0002526 Trgj4 TR_J_gene TR_J_gene MGP_LPJ_T0036599.1 MGP_LPJ_G0020348.1 mouse_genomes_project 13 32163029 32174039 - MGP_LPJ_P0036599 Serpinb6e protein_coding protein_coding MGP_LPJ_T0036600.1 MGP_LPJ_G0020348.1 mouse_genomes_project 13 32171633 32174039 - MGP_LPJ_P0036600 Serpinb6e protein_coding protein_coding MGP_LPJ_T0037823.1 MGP_LPJ_G0020768.1 mouse_genomes_project 13 100116869 100123941 - MGP_LPJ_P0037823 Btf3 protein_coding protein_coding MGP_LPJ_T0037824.1 MGP_LPJ_G0020768.1 mouse_genomes_project 13 100116870 100123980 - MGP_LPJ_P0037824 Btf3 protein_coding protein_coding MGP_LPJ_T0037825.1 MGP_LPJ_G0020768.1 mouse_genomes_project 13 100116871 100118489 - Btf3 protein_coding retained_intron MGP_LPJ_T0037826.1 MGP_LPJ_G0020768.1 mouse_genomes_project 13 100116915 100123350 - MGP_LPJ_P0037826 Btf3 protein_coding protein_coding MGP_LPJ_T0037827.1 MGP_LPJ_G0020768.1 mouse_genomes_project 13 100120012 100123970 - Btf3 protein_coding retained_intron MGP_LPJ_T0037035.1 MGP_LPJ_G0020491.1 mouse_genomes_project 13 54715985 54731293 - MGP_LPJ_P0037035 Hk3 protein_coding nonsense_mediated_decay MGP_LPJ_T0037036.1 MGP_LPJ_G0020491.1 mouse_genomes_project 13 54716061 54730901 - MGP_LPJ_P0037036 Hk3 protein_coding protein_coding MGP_LPJ_T0037037.1 MGP_LPJ_G0020491.1 mouse_genomes_project 13 54716164 54729426 - MGP_LPJ_P0037037 Hk3 protein_coding protein_coding MGP_LPJ_T0037038.1 MGP_LPJ_G0020491.1 mouse_genomes_project 13 54725039 54731294 - MGP_LPJ_P0037038 Hk3 protein_coding protein_coding MGP_LPJ_T0037039.1 MGP_LPJ_G0020491.1 mouse_genomes_project 13 54725089 54731319 - MGP_LPJ_P0037039 Hk3 protein_coding nonsense_mediated_decay MGP_LPJ_T0037040.1 MGP_LPJ_G0020491.1 mouse_genomes_project 13 54725777 54731214 - MGP_LPJ_P0037040 Hk3 protein_coding nonsense_mediated_decay MGP_LPJ_T0003503.1 MGP_LPJ_G0003199.1 mouse_genomes_project 13 85334724 85337319 - A230107N01Rik antisense antisense MGP_LPJ_T0003504.1 MGP_LPJ_G0003199.1 mouse_genomes_project 13 85335753 85337244 - A230107N01Rik antisense antisense MGP_LPJ_T0003474.1 MGP_LPJ_G0003187.1 mouse_genomes_project 13 55537256 55541915 - antisense antisense MGP_LPJ_T0003475.1 MGP_LPJ_G0003187.1 mouse_genomes_project 13 55538060 55541900 - antisense antisense MGP_LPJ_T0003476.1 MGP_LPJ_G0003187.1 mouse_genomes_project 13 55538067 55541926 - antisense antisense MGP_LPJ_T0012944.1 MGP_LPJ_G0011035.1 mouse_genomes_project 13 95212495 95212824 - processed_pseudogene processed_pseudogene MGP_LPJ_T0037762.1 MGP_LPJ_G0020747.1 mouse_genomes_project 13 97221192 97510192 - MGP_LPJ_P0037762 Iqgap2 protein_coding protein_coding MGP_LPJ_T0101636.1 MGP_LPJ_G0039701.1 mouse_genomes_project 13 114282281 114285137 - unitary_pseudogene unitary_pseudogene MGP_LPJ_T0036788.1 MGP_LPJ_G0020418.1 mouse_genomes_project 13 45268076 45296093 + MGP_LPJ_P0036788 Stmnd1 protein_coding protein_coding MGP_LPJ_T0100294.1 MGP_LPJ_G0038557.1 mouse_genomes_project 13 83077220 83077351 + Gm24295 snoRNA snoRNA MGP_LPJ_T0100298.1 MGP_LPJ_G0038561.1 mouse_genomes_project 13 96908537 96908675 + Snora47 snoRNA snoRNA MGP_LPJ_T0036591.1 MGP_LPJ_G0020342.1 mouse_genomes_project 13 31381808 31394571 - MGP_LPJ_P0036591 Serpinb9c protein_coding protein_coding MGP_LPJ_T0036592.1 MGP_LPJ_G0020342.1 mouse_genomes_project 13 31382118 31393180 - MGP_LPJ_P0036592 Serpinb9c protein_coding protein_coding MGP_LPJ_T0036593.1 MGP_LPJ_G0020342.1 mouse_genomes_project 13 31391294 31393324 - MGP_LPJ_P0036593 Serpinb9c protein_coding protein_coding MGP_LPJ_T0036849.1 MGP_LPJ_G0020438.1 mouse_genomes_project 13 48390739 48403819 - MGP_LPJ_P0036849 Card19 protein_coding protein_coding MGP_LPJ_T0006556.1 MGP_LPJ_G0005444.1 mouse_genomes_project 13 29710760 29719581 + Gm11377 lincRNA lincRNA MGP_LPJ_T0012883.1 MGP_LPJ_G0010974.1 mouse_genomes_project 13 22096846 22097293 + processed_pseudogene processed_pseudogene MGP_LPJ_T0036378.1 MGP_LPJ_G0020232.1 mouse_genomes_project 13 20447054 20447975 - MGP_LPJ_P0036378 Vmn1r210 protein_coding protein_coding MGP_LPJ_T0012874.1 MGP_LPJ_G0010965.1 mouse_genomes_project 13 20013643 20017195 + processed_pseudogene processed_pseudogene MGP_LPJ_T0012941.1 MGP_LPJ_G0011032.1 mouse_genomes_project 13 89736969 89737409 + processed_pseudogene processed_pseudogene MGP_LPJ_T0037064.1 MGP_LPJ_G0020499.1 mouse_genomes_project 13 55057869 55062633 - MGP_LPJ_P0037064 Mxd3 protein_coding protein_coding MGP_LPJ_T0037065.1 MGP_LPJ_G0020499.1 mouse_genomes_project 13 55058183 55062608 - Mxd3 protein_coding retained_intron MGP_LPJ_T0037066.1 MGP_LPJ_G0020499.1 mouse_genomes_project 13 55058413 55062227 - Mxd3 protein_coding processed_transcript MGP_LPJ_T0037405.1 MGP_LPJ_G0020631.1 mouse_genomes_project 13 69062507 69097092 - MGP_LPJ_P0037405 Mtrr protein_coding protein_coding MGP_LPJ_T0036381.1 MGP_LPJ_G0020235.1 mouse_genomes_project 13 20672995 20674099 + MGP_LPJ_P0036381 Vmn1r214 protein_coding protein_coding MGP_LPJ_T0037245.1 MGP_LPJ_G0020556.1 mouse_genomes_project 13 60628661 60794702 + MGP_LPJ_P0037245 Dapk1 protein_coding protein_coding MGP_LPJ_T0037246.1 MGP_LPJ_G0020556.1 mouse_genomes_project 13 60628925 60794702 + MGP_LPJ_P0037246 Dapk1 protein_coding protein_coding MGP_LPJ_T0036529.1 MGP_LPJ_G0020311.1 mouse_genomes_project 13 25604231 25613043 - MGP_LPJ_P0036529 Prl7d1 protein_coding protein_coding MGP_LPJ_T0036530.1 MGP_LPJ_G0020311.1 mouse_genomes_project 13 25612712 25613031 - Prl7d1 protein_coding processed_transcript MGP_LPJ_T0006609.1 MGP_LPJ_G0005479.1 mouse_genomes_project 13 68066514 68068194 - Gm37276 lincRNA lincRNA MGP_LPJ_T0101849.1 MGP_LPJ_G0039886.1 mouse_genomes_project 13 25217008 25220054 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0036317.1 MGP_LPJ_G0020183.1 mouse_genomes_project 13 19058795 19059849 - MGP_LPJ_P0036317 protein_coding protein_coding MGP_LPJ_T0036319.1 MGP_LPJ_G0020183.1 mouse_genomes_project 13 19059059 19064612 - MGP_LPJ_P0036319 protein_coding protein_coding MGP_LPJ_T0006532.1 MGP_LPJ_G0005427.1 mouse_genomes_project 13 21156266 21159318 - C230035I16Rik lincRNA lincRNA MGP_LPJ_T0006533.1 MGP_LPJ_G0005427.1 mouse_genomes_project 13 21156398 21159122 - C230035I16Rik lincRNA lincRNA MGP_LPJ_T0006598.1 MGP_LPJ_G0005471.1 mouse_genomes_project 13 54618090 54619334 + 5330429C05Rik lincRNA lincRNA MGP_LPJ_T0037760.1 MGP_LPJ_G0020745.1 mouse_genomes_project 13 97099954 97113124 - MGP_LPJ_P0037760 F2rl1 protein_coding protein_coding MGP_LPJ_T0036414.1 MGP_LPJ_G0020260.1 mouse_genomes_project 13 21428786 21438431 + MGP_LPJ_P0036414 Hist1h2bn protein_coding protein_coding MGP_LPJ_T0000925.1 MGP_LPJ_G0000853.1 mouse_genomes_project 13 91735801 91736695 - TEC TEC MGP_LPJ_T0036107.1 MGP_LPJ_G0020112.1 mouse_genomes_project 13 1380643 1441621 + MGP_LPJ_P0036107 Gm5444 protein_coding protein_coding MGP_LPJ_T0036090.1 MGP_LPJ_G0020105.1 mouse_genomes_project 13 754427 760375 + MGP_LPJ_P0036090 protein_coding nonsense_mediated_decay MGP_LPJ_T0036091.1 MGP_LPJ_G0020105.1 mouse_genomes_project 13 754430 767668 + MGP_LPJ_P0036091 protein_coding protein_coding MGP_LPJ_T0009952.1 MGP_LPJ_G0008070.1 mouse_genomes_project 13 55220334 55220430 - Mir6944 miRNA miRNA MGP_LPJ_T0037235.1 MGP_LPJ_G0020550.1 mouse_genomes_project 13 59702733 59708561 - MGP_LPJ_P0037235 Spata31d1d protein_coding protein_coding MGP_LPJ_T0036511.1 MGP_LPJ_G0020301.1 mouse_genomes_project 13 25196529 25203155 + MGP_LPJ_P0036511 Prl6a1 protein_coding protein_coding MGP_LPJ_T0036512.1 MGP_LPJ_G0020301.1 mouse_genomes_project 13 25197848 25203155 + MGP_LPJ_P0036512 Prl6a1 protein_coding protein_coding MGP_LPJ_T0099039.1 MGP_LPJ_G0037302.1 mouse_genomes_project 13 97747844 97747944 - Gm23955 snRNA snRNA MGP_LPJ_T0037594.1 MGP_LPJ_G0020696.1 mouse_genomes_project 13 86317254 86349241 + MGP_LPJ_P0037594 Ccnh protein_coding protein_coding MGP_LPJ_T0037595.1 MGP_LPJ_G0020696.1 mouse_genomes_project 13 86317281 86331304 + MGP_LPJ_P0037595 Ccnh protein_coding protein_coding MGP_LPJ_T0037596.1 MGP_LPJ_G0020696.1 mouse_genomes_project 13 86317294 86341949 + MGP_LPJ_P0037596 Ccnh protein_coding protein_coding MGP_LPJ_T0037597.1 MGP_LPJ_G0020696.1 mouse_genomes_project 13 86317323 86342247 + MGP_LPJ_P0037597 Ccnh protein_coding protein_coding MGP_LPJ_T0037598.1 MGP_LPJ_G0020696.1 mouse_genomes_project 13 86331291 86359001 + MGP_LPJ_P0037598 Ccnh protein_coding protein_coding MGP_LPJ_T0037599.1 MGP_LPJ_G0020696.1 mouse_genomes_project 13 86340659 86342446 + Ccnh protein_coding processed_transcript MGP_LPJ_T0037600.1 MGP_LPJ_G0020696.1 mouse_genomes_project 13 86341121 86342242 + Ccnh protein_coding retained_intron MGP_LPJ_T0012860.1 MGP_LPJ_G0010951.1 mouse_genomes_project 13 9235935 9236408 + processed_pseudogene processed_pseudogene MGP_LPJ_T0037162.1 MGP_LPJ_G0020534.1 mouse_genomes_project 13 57897642 58010814 - MGP_LPJ_P0037162 Klhl3 protein_coding protein_coding MGP_LPJ_T0037163.1 MGP_LPJ_G0020534.1 mouse_genomes_project 13 57898372 57999655 - MGP_LPJ_P0037163 Klhl3 protein_coding protein_coding MGP_LPJ_T0037687.1 MGP_LPJ_G0020717.1 mouse_genomes_project 13 93874221 93910148 - MGP_LPJ_P0037687 Fam151b protein_coding protein_coding MGP_LPJ_T0009965.1 MGP_LPJ_G0008083.1 mouse_genomes_project 13 71704440 71704561 + Mir466f-4 miRNA miRNA MGP_LPJ_T0037075.1 MGP_LPJ_G0020505.1 mouse_genomes_project 13 55186566 55200779 + MGP_LPJ_P0037075 Grk6 protein_coding protein_coding MGP_LPJ_T0037076.1 MGP_LPJ_G0020505.1 mouse_genomes_project 13 55186566 55202385 + MGP_LPJ_P0037076 Grk6 protein_coding protein_coding MGP_LPJ_T0037077.1 MGP_LPJ_G0020505.1 mouse_genomes_project 13 55186741 55201039 + MGP_LPJ_P0037077 Grk6 protein_coding unknown_likely_coding MGP_LPJ_T0100289.1 MGP_LPJ_G0038552.1 mouse_genomes_project 13 76725546 76725676 + Gm24163 snoRNA snoRNA MGP_LPJ_T0012942.1 MGP_LPJ_G0011033.1 mouse_genomes_project 13 90985206 90985807 + processed_pseudogene processed_pseudogene MGP_LPJ_T0036375.1 MGP_LPJ_G0020229.1 mouse_genomes_project 13 20059760 20060669 - MGP_LPJ_P0036375 Vmn1r202 protein_coding protein_coding MGP_LPJ_T0036819.1 MGP_LPJ_G0020428.1 mouse_genomes_project 13 46155644 46288130 + MGP_LPJ_P0036819 Rnf144b protein_coding protein_coding MGP_LPJ_T0036820.1 MGP_LPJ_G0020428.1 mouse_genomes_project 13 46232041 46288130 + MGP_LPJ_P0036820 Rnf144b protein_coding protein_coding MGP_LPJ_T0037398.1 MGP_LPJ_G0020626.1 mouse_genomes_project 13 68203151 68213235 - MGP_LPJ_P0037398 protein_coding protein_coding MGP_LPJ_T0037632.1 MGP_LPJ_G0020702.1 mouse_genomes_project 13 91101359 91424116 - MGP_LPJ_P0037632 Xrcc4 protein_coding nonsense_mediated_decay MGP_LPJ_T0037633.1 MGP_LPJ_G0020702.1 mouse_genomes_project 13 91178332 91424201 - MGP_LPJ_P0037633 Xrcc4 protein_coding protein_coding MGP_LPJ_T0037634.1 MGP_LPJ_G0020702.1 mouse_genomes_project 13 91397508 91424129 - MGP_LPJ_P0037634 Xrcc4 protein_coding protein_coding MGP_LPJ_T0037635.1 MGP_LPJ_G0020702.1 mouse_genomes_project 13 91397543 91423674 - MGP_LPJ_P0037635 Xrcc4 protein_coding protein_coding MGP_LPJ_T0037644.1 MGP_LPJ_G0020707.1 mouse_genomes_project 13 92314666 92610120 - MGP_LPJ_P0037644 Atg10 protein_coding protein_coding MGP_LPJ_T0037610.1 MGP_LPJ_G0020698.1 mouse_genomes_project 13 87243302 87244932 - MGP_LPJ_P0037610 Cox7c protein_coding protein_coding MGP_LPJ_T0037611.1 MGP_LPJ_G0020698.1 mouse_genomes_project 13 87243302 87245376 - MGP_LPJ_P0037611 Cox7c protein_coding protein_coding MGP_LPJ_T0037612.1 MGP_LPJ_G0020698.1 mouse_genomes_project 13 87243307 87244819 - MGP_LPJ_P0037612 Cox7c protein_coding protein_coding MGP_LPJ_T0037613.1 MGP_LPJ_G0020698.1 mouse_genomes_project 13 87243381 87245246 - Cox7c protein_coding processed_transcript MGP_LPJ_T0003530.1 MGP_LPJ_G0003215.1 mouse_genomes_project 13 121640745 121663140 - Gm16263 antisense antisense MGP_LPJ_T0036639.1 MGP_LPJ_G0020359.1 mouse_genomes_project 13 33095527 33108256 + MGP_LPJ_P0036639 Fam50b protein_coding protein_coding MGP_LPJ_T0003508.1 MGP_LPJ_G0003201.1 mouse_genomes_project 13 93272672 93273285 + 1700119I11Rik antisense antisense MGP_LPJ_T0003509.1 MGP_LPJ_G0003201.1 mouse_genomes_project 13 93272725 93273279 + 1700119I11Rik antisense antisense MGP_LPJ_T0036329.1 MGP_LPJ_G0020192.1 mouse_genomes_project 13 19229442 19229949 - MGP_LPJ_P0036329 Hist1h2bl protein_coding protein_coding MGP_LPJ_T0037428.1 MGP_LPJ_G0020642.1 mouse_genomes_project 13 71482771 71484327 + MGP_LPJ_P0037428 8030423J24Rik protein_coding protein_coding MGP_LPJ_T0009953.1 MGP_LPJ_G0008071.1 mouse_genomes_project 13 55250062 55250130 - Mir6945 miRNA miRNA MGP_LPJ_T0037111.1 MGP_LPJ_G0020515.1 mouse_genomes_project 13 55382862 55432368 + MGP_LPJ_P0037111 Ddx46 protein_coding protein_coding MGP_LPJ_T0037112.1 MGP_LPJ_G0020515.1 mouse_genomes_project 13 55382862 55432368 + MGP_LPJ_P0037112 Ddx46 protein_coding protein_coding MGP_LPJ_T0037113.1 MGP_LPJ_G0020515.1 mouse_genomes_project 13 55383014 55432376 + MGP_LPJ_P0037113 Ddx46 protein_coding unknown_likely_coding MGP_LPJ_T0006596.1 MGP_LPJ_G0005469.1 mouse_genomes_project 13 54065114 54065357 - Gm16248 lincRNA lincRNA MGP_LPJ_T0036413.1 MGP_LPJ_G0020259.1 mouse_genomes_project 13 21428778 21438430 + MGP_LPJ_P0036413 Hist1h2bc protein_coding protein_coding MGP_LPJ_T0036387.1 MGP_LPJ_G0020241.1 mouse_genomes_project 13 20955642 20976602 + MGP_LPJ_P0036387 protein_coding protein_coding MGP_LPJ_T0036112.1 MGP_LPJ_G0020116.1 mouse_genomes_project 13 3302064 3311542 - Pfkp protein_coding retained_intron MGP_LPJ_T0036113.1 MGP_LPJ_G0020116.1 mouse_genomes_project 13 3302064 3373213 - MGP_LPJ_P0036113 Pfkp protein_coding protein_coding MGP_LPJ_T0036114.1 MGP_LPJ_G0020116.1 mouse_genomes_project 13 3303575 3373161 - MGP_LPJ_P0036114 Pfkp protein_coding protein_coding MGP_LPJ_T0036115.1 MGP_LPJ_G0020116.1 mouse_genomes_project 13 3303861 3309617 - MGP_LPJ_P0036115 Pfkp protein_coding protein_coding MGP_LPJ_T0036116.1 MGP_LPJ_G0020116.1 mouse_genomes_project 13 3304893 3320483 - MGP_LPJ_P0036116 Pfkp protein_coding nonsense_mediated_decay MGP_LPJ_T0036117.1 MGP_LPJ_G0020116.1 mouse_genomes_project 13 3304893 3321360 - MGP_LPJ_P0036117 Pfkp protein_coding nonsense_mediated_decay MGP_LPJ_T0036118.1 MGP_LPJ_G0020116.1 mouse_genomes_project 13 3308409 3311202 - Pfkp protein_coding retained_intron MGP_LPJ_T0036119.1 MGP_LPJ_G0020116.1 mouse_genomes_project 13 3315565 3373161 - Pfkp protein_coding retained_intron MGP_LPJ_T0036120.1 MGP_LPJ_G0020116.1 mouse_genomes_project 13 3320897 3325458 - Pfkp protein_coding retained_intron MGP_LPJ_T0036121.1 MGP_LPJ_G0020116.1 mouse_genomes_project 13 3325047 3373161 - Pfkp protein_coding retained_intron MGP_LPJ_T0036122.1 MGP_LPJ_G0020116.1 mouse_genomes_project 13 3338927 3346468 - Pfkp protein_coding retained_intron MGP_LPJ_T0036123.1 MGP_LPJ_G0020116.1 mouse_genomes_project 13 3343476 3373161 - Pfkp protein_coding retained_intron MGP_LPJ_T0036124.1 MGP_LPJ_G0020116.1 mouse_genomes_project 13 3345305 3361077 - MGP_LPJ_P0036124 Pfkp protein_coding protein_coding MGP_LPJ_T0099034.1 MGP_LPJ_G0037297.1 mouse_genomes_project 13 80343974 80344081 + Gm24863 snRNA snRNA MGP_LPJ_T0012937.1 MGP_LPJ_G0011028.1 mouse_genomes_project 13 85461951 85462916 - processed_pseudogene processed_pseudogene MGP_LPJ_T0036601.1 MGP_LPJ_G0020349.1 mouse_genomes_project 13 32206205 32231505 - MGP_LPJ_P0036601 Serpinb6c protein_coding protein_coding MGP_LPJ_T0036602.1 MGP_LPJ_G0020349.1 mouse_genomes_project 13 32206206 32232043 - MGP_LPJ_P0036602 Serpinb6c protein_coding protein_coding MGP_LPJ_T0036324.1 MGP_LPJ_G0020188.1 mouse_genomes_project 13 19152616 19156291 - MGP_LPJ_P0036324 Olfr11 protein_coding protein_coding MGP_LPJ_T0036325.1 MGP_LPJ_G0020188.1 mouse_genomes_project 13 19152616 19153558 - MGP_LPJ_P0036325 Olfr11 protein_coding protein_coding MGP_LPJ_T0037814.1 MGP_LPJ_G0020766.1 mouse_genomes_project 13 100068596 100078418 + MGP_LPJ_P0037814 Ankra2 protein_coding protein_coding MGP_LPJ_T0037815.1 MGP_LPJ_G0020766.1 mouse_genomes_project 13 100068646 100078901 + MGP_LPJ_P0037815 Ankra2 protein_coding protein_coding MGP_LPJ_T0037816.1 MGP_LPJ_G0020766.1 mouse_genomes_project 13 100068649 100078903 + MGP_LPJ_P0037816 Ankra2 protein_coding protein_coding MGP_LPJ_T0037817.1 MGP_LPJ_G0020766.1 mouse_genomes_project 13 100068714 100079735 + MGP_LPJ_P0037817 Ankra2 protein_coding protein_coding MGP_LPJ_T0037818.1 MGP_LPJ_G0020766.1 mouse_genomes_project 13 100073629 100076452 + Ankra2 protein_coding retained_intron MGP_LPJ_T0003457.1 MGP_LPJ_G0003173.1 mouse_genomes_project 13 22703572 22712141 + 4932702P03Rik antisense antisense MGP_LPJ_T0003458.1 MGP_LPJ_G0003173.1 mouse_genomes_project 13 22703575 22705255 + 4932702P03Rik antisense antisense MGP_LPJ_T0038140.1 MGP_LPJ_G0020873.1 mouse_genomes_project 13 122476986 122486087 + MGP_LPJ_P0038140 protein_coding protein_coding MGP_LPJ_T0038141.1 MGP_LPJ_G0020873.1 mouse_genomes_project 13 122477084 122486087 + MGP_LPJ_P0038141 protein_coding protein_coding MGP_LPJ_T0038142.1 MGP_LPJ_G0020873.1 mouse_genomes_project 13 122483144 122599510 + MGP_LPJ_P0038142 protein_coding protein_coding MGP_LPJ_T0036423.1 MGP_LPJ_G0020267.1 mouse_genomes_project 13 21503936 21504939 + MGP_LPJ_P0036423 Hist1h3b protein_coding protein_coding MGP_LPJ_T0011372.1 MGP_LPJ_G0009490.1 mouse_genomes_project 13 56523232 56523359 + Gm27301 misc_RNA misc_RNA MGP_LPJ_T0100271.1 MGP_LPJ_G0038534.1 mouse_genomes_project 13 29500673 29500788 + Gm22330 snoRNA snoRNA MGP_LPJ_T0100293.1 MGP_LPJ_G0038556.1 mouse_genomes_project 13 80038464 80038608 + Gm25383 snoRNA snoRNA MGP_LPJ_T0000913.1 MGP_LPJ_G0000841.1 mouse_genomes_project 13 40620746 40621209 + TEC TEC MGP_LPJ_T0100290.1 MGP_LPJ_G0038553.1 mouse_genomes_project 13 76775693 76775824 - Gm23319 snoRNA snoRNA MGP_LPJ_T0036371.1 MGP_LPJ_G0020225.1 mouse_genomes_project 13 19952993 19953932 + MGP_LPJ_P0036371 Vmn1r200 protein_coding protein_coding MGP_LPJ_T0006653.1 MGP_LPJ_G0005511.1 mouse_genomes_project 13 113888579 113898820 - Gm6270 lincRNA lincRNA MGP_LPJ_T0009934.1 MGP_LPJ_G0008052.1 mouse_genomes_project 13 19426685 19426817 - Mir1983 miRNA miRNA MGP_LPJ_T0036882.1 MGP_LPJ_G0020453.1 mouse_genomes_project 13 49829331 49845663 + MGP_LPJ_P0036882 Fbxw17 protein_coding protein_coding MGP_LPJ_T0036883.1 MGP_LPJ_G0020453.1 mouse_genomes_project 13 49829348 49837122 + MGP_LPJ_P0036883 Fbxw17 protein_coding nonsense_mediated_decay MGP_LPJ_T0036884.1 MGP_LPJ_G0020453.1 mouse_genomes_project 13 49829353 49841723 + Fbxw17 protein_coding processed_transcript MGP_LPJ_T0036885.1 MGP_LPJ_G0020453.1 mouse_genomes_project 13 49829353 49845674 + MGP_LPJ_P0036885 Fbxw17 protein_coding nonsense_mediated_decay MGP_LPJ_T0036886.1 MGP_LPJ_G0020453.1 mouse_genomes_project 13 49829362 49831747 + Fbxw17 protein_coding retained_intron MGP_LPJ_T0036887.1 MGP_LPJ_G0020453.1 mouse_genomes_project 13 49835320 49838756 + Fbxw17 protein_coding processed_transcript MGP_LPJ_T0036888.1 MGP_LPJ_G0020453.1 mouse_genomes_project 13 49841435 49844004 + Fbxw17 protein_coding retained_intron MGP_LPJ_T0036889.1 MGP_LPJ_G0020453.1 mouse_genomes_project 13 49843014 49845670 + Fbxw17 protein_coding retained_intron MGP_LPJ_T0036890.1 MGP_LPJ_G0020453.1 mouse_genomes_project 13 49843064 49844270 + Fbxw17 protein_coding retained_intron MGP_LPJ_T0036891.1 MGP_LPJ_G0020453.1 mouse_genomes_project 13 49843250 49844133 + Fbxw17 protein_coding retained_intron MGP_LPJ_T0036892.1 MGP_LPJ_G0020453.1 mouse_genomes_project 13 49843569 49844247 + Fbxw17 protein_coding retained_intron MGP_LPJ_T0036893.1 MGP_LPJ_G0020453.1 mouse_genomes_project 13 49843604 49845663 + MGP_LPJ_P0036893 Fbxw17 protein_coding protein_coding MGP_LPJ_T0036894.1 MGP_LPJ_G0020453.1 mouse_genomes_project 13 49844078 49845657 + MGP_LPJ_P0036894 Fbxw17 protein_coding protein_coding MGP_LPJ_T0037320.1 MGP_LPJ_G0020585.1 mouse_genomes_project 13 64745950 64752998 + MGP_LPJ_P0037320 Cdk20 protein_coding protein_coding MGP_LPJ_T0012956.1 MGP_LPJ_G0011047.1 mouse_genomes_project 13 122898605 122912222 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006536.1 MGP_LPJ_G0005430.1 mouse_genomes_project 13 22422360 22429010 - C530050E15Rik lincRNA lincRNA MGP_LPJ_T0036631.1 MGP_LPJ_G0020357.1 mouse_genomes_project 13 32521591 32688194 - MGP_LPJ_P0036631 Slc22a23 protein_coding protein_coding MGP_LPJ_T0036632.1 MGP_LPJ_G0020357.1 mouse_genomes_project 13 32525301 32535965 - Slc22a23 protein_coding retained_intron MGP_LPJ_T0036633.1 MGP_LPJ_G0020357.1 mouse_genomes_project 13 32546452 32687992 - MGP_LPJ_P0036633 Slc22a23 protein_coding nonsense_mediated_decay MGP_LPJ_T0036634.1 MGP_LPJ_G0020357.1 mouse_genomes_project 13 32563573 32687600 - Slc22a23 protein_coding processed_transcript MGP_LPJ_T0036964.1 MGP_LPJ_G0020478.1 mouse_genomes_project 13 54229219 54242330 - 4833439L19Rik protein_coding processed_transcript MGP_LPJ_T0036965.1 MGP_LPJ_G0020478.1 mouse_genomes_project 13 54229435 54242347 - MGP_LPJ_P0036965 4833439L19Rik protein_coding protein_coding MGP_LPJ_T0036966.1 MGP_LPJ_G0020478.1 mouse_genomes_project 13 54233189 54242288 - 4833439L19Rik protein_coding retained_intron MGP_LPJ_T0036967.1 MGP_LPJ_G0020478.1 mouse_genomes_project 13 54233363 54242335 - 4833439L19Rik protein_coding retained_intron MGP_LPJ_T0036968.1 MGP_LPJ_G0020478.1 mouse_genomes_project 13 54233582 54242327 - MGP_LPJ_P0036968 4833439L19Rik protein_coding protein_coding MGP_LPJ_T0036969.1 MGP_LPJ_G0020478.1 mouse_genomes_project 13 54238566 54242341 - 4833439L19Rik protein_coding retained_intron MGP_LPJ_T0036970.1 MGP_LPJ_G0020478.1 mouse_genomes_project 13 54238688 54242353 - MGP_LPJ_P0036970 4833439L19Rik protein_coding protein_coding MGP_LPJ_T0036971.1 MGP_LPJ_G0020478.1 mouse_genomes_project 13 54238703 54242322 - MGP_LPJ_P0036971 4833439L19Rik protein_coding protein_coding MGP_LPJ_T0009930.1 MGP_LPJ_G0008048.1 mouse_genomes_project 13 15088877 15089008 + Mir466i miRNA miRNA MGP_LPJ_T0011364.1 MGP_LPJ_G0009482.1 mouse_genomes_project 13 14136482 14136770 - Gm26098 misc_RNA misc_RNA MGP_LPJ_T0038120.1 MGP_LPJ_G0020866.1 mouse_genomes_project 13 121312521 121319667 - MGP_LPJ_P0038120 protein_coding protein_coding MGP_LPJ_T0009951.1 MGP_LPJ_G0008069.1 mouse_genomes_project 13 55194334 55194400 + Mir6943 miRNA miRNA MGP_LPJ_T0037735.1 MGP_LPJ_G0020739.1 mouse_genomes_project 13 96522092 96563668 + MGP_LPJ_P0037735 Wdr41 protein_coding protein_coding MGP_LPJ_T0037736.1 MGP_LPJ_G0020739.1 mouse_genomes_project 13 96522096 96572439 + MGP_LPJ_P0037736 Wdr41 protein_coding protein_coding MGP_LPJ_T0037737.1 MGP_LPJ_G0020739.1 mouse_genomes_project 13 96522096 96572438 + MGP_LPJ_P0037737 Wdr41 protein_coding protein_coding MGP_LPJ_T0037738.1 MGP_LPJ_G0020739.1 mouse_genomes_project 13 96522186 96563614 + MGP_LPJ_P0037738 Wdr41 protein_coding protein_coding MGP_LPJ_T0037739.1 MGP_LPJ_G0020739.1 mouse_genomes_project 13 96522186 96563614 + MGP_LPJ_P0037739 Wdr41 protein_coding protein_coding MGP_LPJ_T0037740.1 MGP_LPJ_G0020739.1 mouse_genomes_project 13 96522186 96563614 + MGP_LPJ_P0037740 Wdr41 protein_coding protein_coding MGP_LPJ_T0036418.1 MGP_LPJ_G0020264.1 mouse_genomes_project 13 21454137 21461110 - MGP_LPJ_P0036418 Hfe protein_coding protein_coding MGP_LPJ_T0036419.1 MGP_LPJ_G0020264.1 mouse_genomes_project 13 21454137 21461110 - MGP_LPJ_P0036419 Hfe protein_coding protein_coding MGP_LPJ_T0036420.1 MGP_LPJ_G0020264.1 mouse_genomes_project 13 21454137 21461110 - MGP_LPJ_P0036420 Hfe protein_coding protein_coding MGP_LPJ_T0036282.1 MGP_LPJ_G0020167.1 mouse_genomes_project 13 18615876 18626867 + MGP_LPJ_P0036282 protein_coding protein_coding MGP_LPJ_T0012856.1 MGP_LPJ_G0010947.1 mouse_genomes_project 13 820039 820300 + processed_pseudogene processed_pseudogene MGP_LPJ_T0037236.1 MGP_LPJ_G0020551.1 mouse_genomes_project 13 59719323 59723402 - MGP_LPJ_P0037236 1700014D04Rik protein_coding protein_coding MGP_LPJ_T0037237.1 MGP_LPJ_G0020551.1 mouse_genomes_project 13 59720436 59721231 - MGP_LPJ_P0037237 1700014D04Rik protein_coding protein_coding MGP_LPJ_T0037238.1 MGP_LPJ_G0020551.1 mouse_genomes_project 13 59722187 59725228 - MGP_LPJ_P0037238 1700014D04Rik protein_coding protein_coding MGP_LPJ_T0037364.1 MGP_LPJ_G0020607.1 mouse_genomes_project 13 67576409 67595612 + MGP_LPJ_P0037364 protein_coding protein_coding MGP_LPJ_T0037365.1 MGP_LPJ_G0020607.1 mouse_genomes_project 13 67576438 67595612 + MGP_LPJ_P0037365 protein_coding protein_coding MGP_LPJ_T0002514.1 MGP_LPJ_G0002420.1 mouse_genomes_project 13 16761590 16771491 + MGP_LPJ_P0002514 Tcrg-C4 TR_C_gene TR_C_gene MGP_LPJ_T0037464.1 MGP_LPJ_G0020658.1 mouse_genomes_project 13 74666669 74689636 + MGP_LPJ_P0037464 Brd9 protein_coding protein_coding MGP_LPJ_T0037465.1 MGP_LPJ_G0020658.1 mouse_genomes_project 13 74666693 74689634 + MGP_LPJ_P0037465 Brd9 protein_coding unknown_likely_coding MGP_LPJ_T0036500.1 MGP_LPJ_G0020293.1 mouse_genomes_project 13 24604875 24606822 - MGP_LPJ_P0036500 Hdgfl1 protein_coding protein_coding MGP_LPJ_T0098154.1 MGP_LPJ_G0036435.1 mouse_genomes_project 13 45519259 45519337 + Gm24915 rRNA rRNA MGP_LPJ_T0003480.1 MGP_LPJ_G0003189.1 mouse_genomes_project 13 63570039 63578198 + Gm16133 antisense antisense MGP_LPJ_T0003481.1 MGP_LPJ_G0003189.1 mouse_genomes_project 13 63570112 63578195 + Gm16133 antisense antisense MGP_LPJ_T0036200.1 MGP_LPJ_G0020134.1 mouse_genomes_project 13 9431311 9496432 + MGP_LPJ_P0036200 Ero1lb protein_coding protein_coding MGP_LPJ_T0036125.1 MGP_LPJ_G0020117.1 mouse_genomes_project 13 4744641 4750407 - MGP_LPJ_P0036125 protein_coding protein_coding MGP_LPJ_T0037733.1 MGP_LPJ_G0020738.1 mouse_genomes_project 13 96418940 96428301 + MGP_LPJ_P0037733 Otp protein_coding protein_coding MGP_LPJ_T0037734.1 MGP_LPJ_G0020738.1 mouse_genomes_project 13 96425938 96426889 + Otp protein_coding processed_transcript MGP_LPJ_T0012939.1 MGP_LPJ_G0011030.1 mouse_genomes_project 13 89017090 89018096 + processed_pseudogene processed_pseudogene MGP_LPJ_T0036104.1 MGP_LPJ_G0020111.1 mouse_genomes_project 13 1186342 1204030 - MGP_LPJ_P0036104 Akr1e1 protein_coding protein_coding MGP_LPJ_T0036105.1 MGP_LPJ_G0020111.1 mouse_genomes_project 13 1188074 1204030 - MGP_LPJ_P0036105 Akr1e1 protein_coding protein_coding MGP_LPJ_T0036106.1 MGP_LPJ_G0020111.1 mouse_genomes_project 13 1196890 1203990 - Akr1e1 protein_coding processed_transcript MGP_LPJ_T0036641.1 MGP_LPJ_G0020361.1 mouse_genomes_project 13 33284190 33294221 - MGP_LPJ_P0036641 Fam217a protein_coding protein_coding MGP_LPJ_T0012950.1 MGP_LPJ_G0011041.1 mouse_genomes_project 13 108800188 108800434 - processed_pseudogene processed_pseudogene MGP_LPJ_T0037395.1 MGP_LPJ_G0020624.1 mouse_genomes_project 13 68155683 68174800 - MGP_LPJ_P0037395 protein_coding protein_coding MGP_LPJ_T0037271.1 MGP_LPJ_G0020575.1 mouse_genomes_project 13 63541611 63686591 - MGP_LPJ_P0037271 Fancc protein_coding protein_coding MGP_LPJ_T0037272.1 MGP_LPJ_G0020575.1 mouse_genomes_project 13 63548420 63686570 - MGP_LPJ_P0037272 Fancc protein_coding protein_coding MGP_LPJ_T0037273.1 MGP_LPJ_G0020575.1 mouse_genomes_project 13 63548635 63554302 - Fancc protein_coding processed_transcript MGP_LPJ_T0037274.1 MGP_LPJ_G0020575.1 mouse_genomes_project 13 63548636 63686571 - MGP_LPJ_P0037274 Fancc protein_coding protein_coding MGP_LPJ_T0037275.1 MGP_LPJ_G0020575.1 mouse_genomes_project 13 63549016 63686540 - MGP_LPJ_P0037275 Fancc protein_coding protein_coding MGP_LPJ_T0037276.1 MGP_LPJ_G0020575.1 mouse_genomes_project 13 63549377 63561926 - Fancc protein_coding processed_transcript MGP_LPJ_T0037277.1 MGP_LPJ_G0020575.1 mouse_genomes_project 13 63553406 63686568 - Fancc protein_coding retained_intron MGP_LPJ_T0037278.1 MGP_LPJ_G0020575.1 mouse_genomes_project 13 63558205 63568767 - Fancc protein_coding processed_transcript MGP_LPJ_T0037279.1 MGP_LPJ_G0020575.1 mouse_genomes_project 13 63567441 63592568 - Fancc protein_coding processed_transcript MGP_LPJ_T0037280.1 MGP_LPJ_G0020575.1 mouse_genomes_project 13 63567441 63686591 - Fancc protein_coding retained_intron MGP_LPJ_T0037281.1 MGP_LPJ_G0020575.1 mouse_genomes_project 13 63578628 63649106 - MGP_LPJ_P0037281 Fancc protein_coding protein_coding MGP_LPJ_T0037282.1 MGP_LPJ_G0020575.1 mouse_genomes_project 13 63587741 63685870 - MGP_LPJ_P0037282 Fancc protein_coding protein_coding MGP_LPJ_T0037283.1 MGP_LPJ_G0020575.1 mouse_genomes_project 13 63587792 63657289 - MGP_LPJ_P0037283 Fancc protein_coding protein_coding MGP_LPJ_T0037284.1 MGP_LPJ_G0020575.1 mouse_genomes_project 13 63587801 63649234 - Fancc protein_coding retained_intron MGP_LPJ_T0037285.1 MGP_LPJ_G0020575.1 mouse_genomes_project 13 63587831 63748638 - MGP_LPJ_P0037285 Fancc protein_coding protein_coding MGP_LPJ_T0037286.1 MGP_LPJ_G0020575.1 mouse_genomes_project 13 63653875 63686529 - MGP_LPJ_P0037286 Fancc protein_coding protein_coding MGP_LPJ_T0037287.1 MGP_LPJ_G0020575.1 mouse_genomes_project 13 63653932 63660759 - MGP_LPJ_P0037287 Fancc protein_coding protein_coding MGP_LPJ_T0037265.1 MGP_LPJ_G0020573.1 mouse_genomes_project 13 63091614 63115442 - MGP_LPJ_P0037265 Fbp1 protein_coding protein_coding MGP_LPJ_T0037266.1 MGP_LPJ_G0020573.1 mouse_genomes_project 13 63091627 63100246 - MGP_LPJ_P0037266 Fbp1 protein_coding protein_coding MGP_LPJ_T0037267.1 MGP_LPJ_G0020573.1 mouse_genomes_project 13 63100206 63115288 - MGP_LPJ_P0037267 Fbp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0009938.1 MGP_LPJ_G0008056.1 mouse_genomes_project 13 21497677 21498164 + miRNA miRNA MGP_LPJ_T0037481.1 MGP_LPJ_G0020667.1 mouse_genomes_project 13 75057835 75086733 - MGP_LPJ_P0037481 Sdha protein_coding protein_coding MGP_LPJ_T0037482.1 MGP_LPJ_G0020667.1 mouse_genomes_project 13 75058313 75059838 - Sdha protein_coding retained_intron MGP_LPJ_T0037483.1 MGP_LPJ_G0020667.1 mouse_genomes_project 13 75063665 75064842 - Sdha protein_coding retained_intron MGP_LPJ_T0037484.1 MGP_LPJ_G0020667.1 mouse_genomes_project 13 75073846 75086655 - Sdha protein_coding processed_transcript MGP_LPJ_T0037485.1 MGP_LPJ_G0020667.1 mouse_genomes_project 13 75075357 75076121 - Sdha protein_coding retained_intron MGP_LPJ_T0037486.1 MGP_LPJ_G0020667.1 mouse_genomes_project 13 75079606 75086692 - Sdha protein_coding retained_intron MGP_LPJ_T0037487.1 MGP_LPJ_G0020667.1 mouse_genomes_project 13 75081242 75086610 - Sdha protein_coding processed_transcript MGP_LPJ_T0037488.1 MGP_LPJ_G0020667.1 mouse_genomes_project 13 75081281 75086688 - Sdha protein_coding processed_transcript MGP_LPJ_T0037510.1 MGP_LPJ_G0020679.1 mouse_genomes_project 13 76870577 76872727 - MGP_LPJ_P0037510 Gpr150 protein_coding protein_coding MGP_LPJ_T0036864.1 MGP_LPJ_G0020444.1 mouse_genomes_project 13 48704653 48731764 + MGP_LPJ_P0036864 Ecm2 protein_coding protein_coding MGP_LPJ_T0009983.1 MGP_LPJ_G0008101.1 mouse_genomes_project 13 117302256 117302356 + Gm25950 miRNA miRNA MGP_LPJ_T0037243.1 MGP_LPJ_G0020554.1 mouse_genomes_project 13 60181433 60184397 - MGP_LPJ_P0037243 Gas1 protein_coding protein_coding MGP_LPJ_T0000922.1 MGP_LPJ_G0000850.1 mouse_genomes_project 13 86558970 86559208 - TEC TEC MGP_LPJ_T0037778.1 MGP_LPJ_G0020754.1 mouse_genomes_project 13 98163241 98163629 + MGP_LPJ_P0037778 Gm17622 protein_coding protein_coding MGP_LPJ_T0037466.1 MGP_LPJ_G0020659.1 mouse_genomes_project 13 74692592 74722114 + MGP_LPJ_P0037466 Zdhhc11 protein_coding protein_coding MGP_LPJ_T0037169.1 MGP_LPJ_G0020539.1 mouse_genomes_project 13 58198093 58270171 - MGP_LPJ_P0037169 Kif27 protein_coding unknown_likely_coding MGP_LPJ_T0100282.1 MGP_LPJ_G0038545.1 mouse_genomes_project 13 55954071 55954194 + Gm25148 snoRNA snoRNA MGP_LPJ_T0012934.1 MGP_LPJ_G0011025.1 mouse_genomes_project 13 79220329 79221773 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003472.1 MGP_LPJ_G0003185.1 mouse_genomes_project 13 54469087 54475854 - Gm16249 antisense antisense MGP_LPJ_T0012863.1 MGP_LPJ_G0010954.1 mouse_genomes_project 13 18164100 18165100 - processed_pseudogene processed_pseudogene MGP_LPJ_T0038139.1 MGP_LPJ_G0020872.1 mouse_genomes_project 13 122476118 122477436 - MGP_LPJ_P0038139 protein_coding protein_coding MGP_LPJ_T0036149.1 MGP_LPJ_G0020121.1 mouse_genomes_project 13 5667938 5679443 - MGP_LPJ_P0036149 protein_coding protein_coding MGP_LPJ_T0036150.1 MGP_LPJ_G0020121.1 mouse_genomes_project 13 5668068 5670665 - MGP_LPJ_P0036150 protein_coding protein_coding MGP_LPJ_T0009963.1 MGP_LPJ_G0008081.1 mouse_genomes_project 13 63538101 63538186 - Mir3074-1 miRNA miRNA MGP_LPJ_T0038117.1 MGP_LPJ_G0020863.1 mouse_genomes_project 13 120094348 120096717 - MGP_LPJ_P0038117 Gm17509 protein_coding protein_coding MGP_LPJ_T0012886.1 MGP_LPJ_G0010977.1 mouse_genomes_project 13 23255540 23256248 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006611.1 MGP_LPJ_G0005481.1 mouse_genomes_project 13 70388075 70394223 - Gm26819 lincRNA lincRNA MGP_LPJ_T0036596.1 MGP_LPJ_G0020345.1 mouse_genomes_project 13 31505376 31516609 + MGP_LPJ_P0036596 Serpinb9g protein_coding protein_coding MGP_LPJ_T0006649.1 MGP_LPJ_G0005508.1 mouse_genomes_project 13 103409982 103478585 + lincRNA lincRNA MGP_LPJ_T0036373.1 MGP_LPJ_G0020227.1 mouse_genomes_project 13 19992545 19994252 + MGP_LPJ_P0036373 Vmn1r189 protein_coding protein_coding MGP_LPJ_T0037795.1 MGP_LPJ_G0020759.1 mouse_genomes_project 13 98764396 98834407 + MGP_LPJ_P0037795 Fam169a protein_coding protein_coding MGP_LPJ_T0037796.1 MGP_LPJ_G0020759.1 mouse_genomes_project 13 98768636 98834407 + MGP_LPJ_P0037796 Fam169a protein_coding protein_coding MGP_LPJ_T0000933.1 MGP_LPJ_G0000861.1 mouse_genomes_project 13 103794988 103795388 - TEC TEC MGP_LPJ_T0037888.1 MGP_LPJ_G0020789.1 mouse_genomes_project 13 102555975 102593113 - MGP_LPJ_P0037888 Rad17 protein_coding protein_coding MGP_LPJ_T0037889.1 MGP_LPJ_G0020789.1 mouse_genomes_project 13 102555975 102593113 - MGP_LPJ_P0037889 Rad17 protein_coding protein_coding MGP_LPJ_T0012918.1 MGP_LPJ_G0011009.1 mouse_genomes_project 13 64830154 64831530 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017285.1 MGP_LPJ_G0015162.1 mouse_genomes_project 13 21045292 21111417 + 4930586N03Rik processed_transcript processed_transcript MGP_LPJ_T0036790.1 MGP_LPJ_G0020420.1 mouse_genomes_project 13 45502646 45655186 + MGP_LPJ_P0036790 Cap2 protein_coding protein_coding MGP_LPJ_T0036791.1 MGP_LPJ_G0020420.1 mouse_genomes_project 13 45640479 45651457 + Cap2 protein_coding processed_transcript MGP_LPJ_T0006634.1 MGP_LPJ_G0005497.1 mouse_genomes_project 13 98999689 99002423 + C430039J16Rik lincRNA lincRNA MGP_LPJ_T0036751.1 MGP_LPJ_G0020403.1 mouse_genomes_project 13 41980992 42001713 - MGP_LPJ_P0036751 Tbc1d7 protein_coding protein_coding MGP_LPJ_T0036752.1 MGP_LPJ_G0020403.1 mouse_genomes_project 13 41980992 42001713 - MGP_LPJ_P0036752 Tbc1d7 protein_coding protein_coding MGP_LPJ_T0037496.1 MGP_LPJ_G0020671.1 mouse_genomes_project 13 75421562 75471118 + MGP_LPJ_P0037496 Erap1 protein_coding protein_coding MGP_LPJ_T0006549.1 MGP_LPJ_G0005439.1 mouse_genomes_project 13 29440100 29541994 + Gm11376 lincRNA lincRNA MGP_LPJ_T0098490.1 MGP_LPJ_G0036767.1 mouse_genomes_project 13 27312809 27313653 - Gm11364 sense_intronic sense_intronic MGP_LPJ_T0006615.1 MGP_LPJ_G0005484.1 mouse_genomes_project 13 80169628 80183307 + Gm29318 lincRNA lincRNA MGP_LPJ_T0037359.1 MGP_LPJ_G0020604.1 mouse_genomes_project 13 67443375 67460744 - MGP_LPJ_P0037359 Rslcan18 protein_coding protein_coding MGP_LPJ_T0037361.1 MGP_LPJ_G0020604.1 mouse_genomes_project 13 67457744 67462990 - Rslcan18 protein_coding retained_intron MGP_LPJ_T0009967.1 MGP_LPJ_G0008085.1 mouse_genomes_project 13 83747950 83748009 - Mir3961 miRNA miRNA MGP_LPJ_T0037893.1 MGP_LPJ_G0020791.1 mouse_genomes_project 13 102615743 102645238 + MGP_LPJ_P0037893 Ccdc125 protein_coding protein_coding MGP_LPJ_T0037894.1 MGP_LPJ_G0020791.1 mouse_genomes_project 13 102615743 102645238 + MGP_LPJ_P0037894 Ccdc125 protein_coding protein_coding MGP_LPJ_T0036503.1 MGP_LPJ_G0020296.1 mouse_genomes_project 13 24962747 25009971 + MGP_LPJ_P0036503 protein_coding protein_coding MGP_LPJ_T0003459.1 MGP_LPJ_G0003174.1 mouse_genomes_project 13 28036789 28038768 + Gm11365 antisense antisense MGP_LPJ_T0017296.1 MGP_LPJ_G0015167.1 mouse_genomes_project 13 33012533 33026367 + Gm15908 processed_transcript processed_transcript MGP_LPJ_T0101836.1 MGP_LPJ_G0039873.1 mouse_genomes_project 13 20572502 20572937 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0009943.1 MGP_LPJ_G0008061.1 mouse_genomes_project 13 39573713 39573785 + Mir5124a miRNA miRNA MGP_LPJ_T0036364.1 MGP_LPJ_G0020218.1 mouse_genomes_project 13 19783345 19784305 - MGP_LPJ_P0036364 Vmn1r193 protein_coding protein_coding MGP_LPJ_T0006534.1 MGP_LPJ_G0005428.1 mouse_genomes_project 13 22112793 22113867 - Gm11342 lincRNA lincRNA MGP_LPJ_T0037776.1 MGP_LPJ_G0020753.1 mouse_genomes_project 13 98153455 98217983 - MGP_LPJ_P0037776 Polk protein_coding protein_coding MGP_LPJ_T0037777.1 MGP_LPJ_G0020753.1 mouse_genomes_project 13 98154940 98192644 - MGP_LPJ_P0037777 Polk protein_coding protein_coding MGP_LPJ_T0036589.1 MGP_LPJ_G0020340.1 mouse_genomes_project 13 31252161 31272586 + MGP_LPJ_P0036589 Serpinb9b protein_coding protein_coding MGP_LPJ_T0036088.1 MGP_LPJ_G0020104.1 mouse_genomes_project 13 683349 701246 - MGP_LPJ_P0036088 Akr1c18 protein_coding protein_coding MGP_LPJ_T0036089.1 MGP_LPJ_G0020104.1 mouse_genomes_project 13 683349 701272 - MGP_LPJ_P0036089 Akr1c18 protein_coding protein_coding MGP_LPJ_T0003466.1 MGP_LPJ_G0003179.1 mouse_genomes_project 13 40610290 40619866 + Gm28564 antisense antisense MGP_LPJ_T0038011.1 MGP_LPJ_G0020825.1 mouse_genomes_project 13 110687784 110774502 + MGP_LPJ_P0038011 Depdc1b protein_coding protein_coding MGP_LPJ_T0038012.1 MGP_LPJ_G0020825.1 mouse_genomes_project 13 110687820 110695970 + Depdc1b protein_coding retained_intron MGP_LPJ_T0038013.1 MGP_LPJ_G0020825.1 mouse_genomes_project 13 110687832 110789497 + MGP_LPJ_P0038013 Depdc1b protein_coding nonsense_mediated_decay MGP_LPJ_T0038014.1 MGP_LPJ_G0020825.1 mouse_genomes_project 13 110687874 110773631 + MGP_LPJ_P0038014 Depdc1b protein_coding protein_coding MGP_LPJ_T0038015.1 MGP_LPJ_G0020825.1 mouse_genomes_project 13 110698020 110753019 + Depdc1b protein_coding processed_transcript MGP_LPJ_T0038016.1 MGP_LPJ_G0020825.1 mouse_genomes_project 13 110734077 110758108 + Depdc1b protein_coding retained_intron MGP_LPJ_T0036403.1 MGP_LPJ_G0020251.1 mouse_genomes_project 13 21304594 21306879 - MGP_LPJ_P0036403 Hist1h3f protein_coding protein_coding MGP_LPJ_T0036269.1 MGP_LPJ_G0020159.1 mouse_genomes_project 13 17013983 17041333 - MGP_LPJ_P0036269 Epdr1 protein_coding protein_coding MGP_LPJ_T0006612.1 MGP_LPJ_G0005482.1 mouse_genomes_project 13 70573970 70601037 - 1700084F23Rik lincRNA lincRNA MGP_LPJ_T0006613.1 MGP_LPJ_G0005482.1 mouse_genomes_project 13 70583406 70600520 - 1700084F23Rik lincRNA lincRNA MGP_LPJ_T0036297.1 MGP_LPJ_G0020175.1 mouse_genomes_project 13 18880305 18902476 - MGP_LPJ_P0036297 Zkscan3 protein_coding protein_coding MGP_LPJ_T0036298.1 MGP_LPJ_G0020175.1 mouse_genomes_project 13 18880305 18902518 - MGP_LPJ_P0036298 Zkscan3 protein_coding protein_coding MGP_LPJ_T0036299.1 MGP_LPJ_G0020175.1 mouse_genomes_project 13 18888373 18894522 - MGP_LPJ_P0036299 Zkscan3 protein_coding protein_coding MGP_LPJ_T0036300.1 MGP_LPJ_G0020175.1 mouse_genomes_project 13 18889059 18902458 - MGP_LPJ_P0036300 Zkscan3 protein_coding protein_coding MGP_LPJ_T0036301.1 MGP_LPJ_G0020175.1 mouse_genomes_project 13 18892990 18902479 - MGP_LPJ_P0036301 Zkscan3 protein_coding protein_coding MGP_LPJ_T0036302.1 MGP_LPJ_G0020175.1 mouse_genomes_project 13 18901306 18902433 - Zkscan3 protein_coding processed_transcript MGP_LPJ_T0036245.1 MGP_LPJ_G0020151.1 mouse_genomes_project 13 15029288 15032981 + MGP_LPJ_P0036245 Mplkip protein_coding protein_coding MGP_LPJ_T0038057.1 MGP_LPJ_G0020835.1 mouse_genomes_project 13 114883046 114987371 + MGP_LPJ_P0038057 Ankrd55 protein_coding protein_coding MGP_LPJ_T0038058.1 MGP_LPJ_G0020835.1 mouse_genomes_project 13 114883046 114945216 + MGP_LPJ_P0038058 Ankrd55 protein_coding protein_coding MGP_LPJ_T0038059.1 MGP_LPJ_G0020835.1 mouse_genomes_project 13 114883046 114987373 + MGP_LPJ_P0038059 Ankrd55 protein_coding protein_coding MGP_LPJ_T0038060.1 MGP_LPJ_G0020835.1 mouse_genomes_project 13 114883113 114957681 + MGP_LPJ_P0038060 Ankrd55 protein_coding protein_coding MGP_LPJ_T0037071.1 MGP_LPJ_G0020502.1 mouse_genomes_project 13 55134218 55150093 + MGP_LPJ_P0037071 Slc34a1 protein_coding protein_coding MGP_LPJ_T0036949.1 MGP_LPJ_G0020471.1 mouse_genomes_project 13 53139502 53139859 + MGP_LPJ_P0036949 Gm5449 protein_coding protein_coding MGP_LPJ_T0036487.1 MGP_LPJ_G0020288.1 mouse_genomes_project 13 22705553 22735442 - MGP_LPJ_P0036487 Aldh5a1 protein_coding protein_coding MGP_LPJ_T0036233.1 MGP_LPJ_G0020144.1 mouse_genomes_project 13 11408206 11718072 - MGP_LPJ_P0036233 Hecw1 protein_coding protein_coding MGP_LPJ_T0038089.1 MGP_LPJ_G0020850.1 mouse_genomes_project 13 115878008 115886422 + MGP_LPJ_P0038089 Esm1 protein_coding protein_coding MGP_LPJ_T0037414.1 MGP_LPJ_G0020637.1 mouse_genomes_project 13 70135221 70171320 - MGP_LPJ_P0037414 Srd5a1 protein_coding protein_coding MGP_LPJ_T0037415.1 MGP_LPJ_G0020637.1 mouse_genomes_project 13 70154180 70171226 - Srd5a1 protein_coding processed_transcript MGP_LPJ_T0036528.1 MGP_LPJ_G0020310.1 mouse_genomes_project 13 25557047 25567011 - MGP_LPJ_P0036528 Prl7a2 protein_coding protein_coding MGP_LPJ_T0009954.1 MGP_LPJ_G0008072.1 mouse_genomes_project 13 57917230 57917306 - Mir874 miRNA miRNA MGP_LPJ_T0036690.1 MGP_LPJ_G0020378.1 mouse_genomes_project 13 36779112 36803000 + MGP_LPJ_P0036690 Snrnp48 protein_coding protein_coding MGP_LPJ_T0036691.1 MGP_LPJ_G0020378.1 mouse_genomes_project 13 36779124 36802259 + MGP_LPJ_P0036691 Snrnp48 protein_coding protein_coding MGP_LPJ_T0100279.1 MGP_LPJ_G0038542.1 mouse_genomes_project 13 48887935 48888068 + Gm25394 snoRNA snoRNA MGP_LPJ_T0003460.1 MGP_LPJ_G0003175.1 mouse_genomes_project 13 29957343 29960383 + Gm11379 antisense antisense MGP_LPJ_T0037247.1 MGP_LPJ_G0020557.1 mouse_genomes_project 13 60815970 60820439 - MGP_LPJ_P0037247 BC051665 protein_coding protein_coding MGP_LPJ_T0009971.1 MGP_LPJ_G0008089.1 mouse_genomes_project 13 92127035 92127145 + Gm44338 miRNA miRNA MGP_LPJ_T0037021.1 MGP_LPJ_G0020489.1 mouse_genomes_project 13 54482446 54489838 + MGP_LPJ_P0037021 Tspan17 protein_coding protein_coding MGP_LPJ_T0037022.1 MGP_LPJ_G0020489.1 mouse_genomes_project 13 54482472 54489830 + MGP_LPJ_P0037022 Tspan17 protein_coding protein_coding MGP_LPJ_T0037023.1 MGP_LPJ_G0020489.1 mouse_genomes_project 13 54482532 54489249 + MGP_LPJ_P0037023 Tspan17 protein_coding protein_coding MGP_LPJ_T0037024.1 MGP_LPJ_G0020489.1 mouse_genomes_project 13 54482664 54489180 + MGP_LPJ_P0037024 Tspan17 protein_coding protein_coding MGP_LPJ_T0037025.1 MGP_LPJ_G0020489.1 mouse_genomes_project 13 54482664 54489284 + MGP_LPJ_P0037025 Tspan17 protein_coding protein_coding MGP_LPJ_T0037026.1 MGP_LPJ_G0020489.1 mouse_genomes_project 13 54482714 54488210 + MGP_LPJ_P0037026 Tspan17 protein_coding protein_coding MGP_LPJ_T0037027.1 MGP_LPJ_G0020489.1 mouse_genomes_project 13 54485807 54489227 + MGP_LPJ_P0037027 Tspan17 protein_coding protein_coding MGP_LPJ_T0037028.1 MGP_LPJ_G0020489.1 mouse_genomes_project 13 54485938 54489837 + MGP_LPJ_P0037028 Tspan17 protein_coding protein_coding MGP_LPJ_T0037029.1 MGP_LPJ_G0020489.1 mouse_genomes_project 13 54488445 54489830 + Tspan17 protein_coding retained_intron MGP_LPJ_T0037511.1 MGP_LPJ_G0020680.1 mouse_genomes_project 13 76876152 76912479 - MGP_LPJ_P0037511 Arsk protein_coding protein_coding MGP_LPJ_T0037512.1 MGP_LPJ_G0020680.1 mouse_genomes_project 13 76888557 76912491 - Arsk protein_coding retained_intron MGP_LPJ_T0036331.1 MGP_LPJ_G0020194.1 mouse_genomes_project 13 19231209 19231682 + MGP_LPJ_P0036331 Hist1h3h protein_coding protein_coding MGP_LPJ_T0012900.1 MGP_LPJ_G0010991.1 mouse_genomes_project 13 28505701 28506019 - processed_pseudogene processed_pseudogene MGP_LPJ_T0037904.1 MGP_LPJ_G0020795.1 mouse_genomes_project 13 102745763 102770707 - MGP_LPJ_P0037904 Ccnb1 protein_coding protein_coding MGP_LPJ_T0036275.1 MGP_LPJ_G0020163.1 mouse_genomes_project 13 17181958 17253412 - MGP_LPJ_P0036275 Gpr141 protein_coding protein_coding MGP_LPJ_T0000907.1 MGP_LPJ_G0000836.1 mouse_genomes_project 13 16812819 16815151 - TEC TEC MGP_LPJ_T0036425.1 MGP_LPJ_G0020269.1 mouse_genomes_project 13 21512905 21514419 - MGP_LPJ_P0036425 Hist1h4a protein_coding protein_coding MGP_LPJ_T0038077.1 MGP_LPJ_G0020844.1 mouse_genomes_project 13 115629040 115636692 + MGP_LPJ_P0038077 Mcidas protein_coding protein_coding MGP_LPJ_T0037072.1 MGP_LPJ_G0020503.1 mouse_genomes_project 13 55150150 55150564 - MGP_LPJ_P0037072 Pfn3 protein_coding protein_coding MGP_LPJ_T0037692.1 MGP_LPJ_G0020719.1 mouse_genomes_project 13 94010096 94011698 - MGP_LPJ_P0037692 Spz1 protein_coding protein_coding MGP_LPJ_T0037476.1 MGP_LPJ_G0020665.1 mouse_genomes_project 13 74944743 75016470 - MGP_LPJ_P0037476 Ahrr protein_coding protein_coding MGP_LPJ_T0037477.1 MGP_LPJ_G0020665.1 mouse_genomes_project 13 74947153 74989618 - Ahrr protein_coding retained_intron MGP_LPJ_T0037478.1 MGP_LPJ_G0020665.1 mouse_genomes_project 13 74954152 74992745 - Ahrr protein_coding processed_transcript MGP_LPJ_T0037479.1 MGP_LPJ_G0020665.1 mouse_genomes_project 13 74955951 74993501 - Ahrr protein_coding processed_transcript MGP_LPJ_T0036784.1 MGP_LPJ_G0020416.1 mouse_genomes_project 13 44486190 44928831 - MGP_LPJ_P0036784 Atxn1 protein_coding protein_coding MGP_LPJ_T0036785.1 MGP_LPJ_G0020416.1 mouse_genomes_project 13 44486190 44928831 - MGP_LPJ_P0036785 Atxn1 protein_coding protein_coding MGP_LPJ_T0036786.1 MGP_LPJ_G0020416.1 mouse_genomes_project 13 44486190 44928831 - MGP_LPJ_P0036786 Atxn1 protein_coding protein_coding MGP_LPJ_T0006573.1 MGP_LPJ_G0005457.1 mouse_genomes_project 13 42998871 43002856 + Gm5083 lincRNA lincRNA MGP_LPJ_T0006574.1 MGP_LPJ_G0005457.1 mouse_genomes_project 13 42998998 43002856 + Gm5083 lincRNA lincRNA MGP_LPJ_T0036482.1 MGP_LPJ_G0020287.1 mouse_genomes_project 13 22643577 22699274 + MGP_LPJ_P0036482 D130043K22Rik protein_coding protein_coding MGP_LPJ_T0036483.1 MGP_LPJ_G0020287.1 mouse_genomes_project 13 22643577 22699267 + MGP_LPJ_P0036483 D130043K22Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0036484.1 MGP_LPJ_G0020287.1 mouse_genomes_project 13 22643588 22700159 + MGP_LPJ_P0036484 D130043K22Rik protein_coding unknown_likely_coding MGP_LPJ_T0036485.1 MGP_LPJ_G0020287.1 mouse_genomes_project 13 22678777 22680912 + D130043K22Rik protein_coding processed_transcript MGP_LPJ_T0036486.1 MGP_LPJ_G0020287.1 mouse_genomes_project 13 22691132 22697852 + D130043K22Rik protein_coding processed_transcript MGP_LPJ_T0036385.1 MGP_LPJ_G0020239.1 mouse_genomes_project 13 20805078 20806099 + MGP_LPJ_P0036385 Vmn1r219 protein_coding protein_coding MGP_LPJ_T0036640.1 MGP_LPJ_G0020360.1 mouse_genomes_project 13 33249781 33277105 + MGP_LPJ_P0036640 Prpf4b protein_coding protein_coding MGP_LPJ_T0036701.1 MGP_LPJ_G0020384.1 mouse_genomes_project 13 38666773 38951517 - MGP_LPJ_P0036701 Ofcc1 protein_coding protein_coding MGP_LPJ_T0037732.1 MGP_LPJ_G0020737.1 mouse_genomes_project 13 96322583 96382151 + MGP_LPJ_P0037732 Tbca protein_coding protein_coding MGP_LPJ_T0037196.1 MGP_LPJ_G0020545.1 mouse_genomes_project 13 59414006 59414699 - Agtpbp1 protein_coding processed_transcript MGP_LPJ_T0037197.1 MGP_LPJ_G0020545.1 mouse_genomes_project 13 59414007 59522955 - MGP_LPJ_P0037197 Agtpbp1 protein_coding protein_coding MGP_LPJ_T0037198.1 MGP_LPJ_G0020545.1 mouse_genomes_project 13 59414009 59497946 - MGP_LPJ_P0037198 Agtpbp1 protein_coding protein_coding MGP_LPJ_T0037199.1 MGP_LPJ_G0020545.1 mouse_genomes_project 13 59414349 59522633 - MGP_LPJ_P0037199 Agtpbp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0037200.1 MGP_LPJ_G0020545.1 mouse_genomes_project 13 59414349 59522955 - MGP_LPJ_P0037200 Agtpbp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0037201.1 MGP_LPJ_G0020545.1 mouse_genomes_project 13 59418319 59510164 - MGP_LPJ_P0037201 Agtpbp1 protein_coding protein_coding MGP_LPJ_T0037202.1 MGP_LPJ_G0020545.1 mouse_genomes_project 13 59438215 59445661 - Agtpbp1 protein_coding processed_transcript MGP_LPJ_T0037203.1 MGP_LPJ_G0020545.1 mouse_genomes_project 13 59444903 59522955 - MGP_LPJ_P0037203 Agtpbp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0037204.1 MGP_LPJ_G0020545.1 mouse_genomes_project 13 59458503 59522955 - MGP_LPJ_P0037204 Agtpbp1 protein_coding protein_coding MGP_LPJ_T0037205.1 MGP_LPJ_G0020545.1 mouse_genomes_project 13 59458513 59522955 - MGP_LPJ_P0037205 Agtpbp1 protein_coding protein_coding MGP_LPJ_T0037206.1 MGP_LPJ_G0020545.1 mouse_genomes_project 13 59476464 59479288 - Agtpbp1 protein_coding processed_transcript MGP_LPJ_T0037207.1 MGP_LPJ_G0020545.1 mouse_genomes_project 13 59477490 59522955 - MGP_LPJ_P0037207 Agtpbp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0037208.1 MGP_LPJ_G0020545.1 mouse_genomes_project 13 59479299 59498828 - Agtpbp1 protein_coding processed_transcript MGP_LPJ_T0037209.1 MGP_LPJ_G0020545.1 mouse_genomes_project 13 59482815 59522955 - MGP_LPJ_P0037209 Agtpbp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0037210.1 MGP_LPJ_G0020545.1 mouse_genomes_project 13 59496662 59522955 - MGP_LPJ_P0037210 Agtpbp1 protein_coding protein_coding MGP_LPJ_T0037211.1 MGP_LPJ_G0020545.1 mouse_genomes_project 13 59496662 59525392 - MGP_LPJ_P0037211 Agtpbp1 protein_coding protein_coding MGP_LPJ_T0037212.1 MGP_LPJ_G0020545.1 mouse_genomes_project 13 59496670 59522630 - MGP_LPJ_P0037212 Agtpbp1 protein_coding protein_coding MGP_LPJ_T0037213.1 MGP_LPJ_G0020545.1 mouse_genomes_project 13 59496800 59553716 - MGP_LPJ_P0037213 Agtpbp1 protein_coding protein_coding MGP_LPJ_T0037214.1 MGP_LPJ_G0020545.1 mouse_genomes_project 13 59501007 59522748 - MGP_LPJ_P0037214 Agtpbp1 protein_coding protein_coding MGP_LPJ_T0037215.1 MGP_LPJ_G0020545.1 mouse_genomes_project 13 59548700 59553732 - Agtpbp1 protein_coding processed_transcript MGP_LPJ_T0037847.1 MGP_LPJ_G0020780.1 mouse_genomes_project 13 101805959 101808099 - MGP_LPJ_P0037847 Cartpt protein_coding protein_coding MGP_LPJ_T0036880.1 MGP_LPJ_G0020451.1 mouse_genomes_project 13 49188699 49188939 - MGP_LPJ_P0036880 protein_coding protein_coding MGP_LPJ_T0036895.1 MGP_LPJ_G0020454.1 mouse_genomes_project 13 49881289 49889338 + MGP_LPJ_P0036895 Nutm2 protein_coding protein_coding MGP_LPJ_T0009945.1 MGP_LPJ_G0008063.1 mouse_genomes_project 13 47674229 47674326 + Gm24111 miRNA miRNA MGP_LPJ_T0101850.1 MGP_LPJ_G0039887.1 mouse_genomes_project 13 25582560 25590154 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0036787.1 MGP_LPJ_G0020417.1 mouse_genomes_project 13 45164252 45181797 - MGP_LPJ_P0036787 Gm10113 protein_coding protein_coding MGP_LPJ_T0037248.1 MGP_LPJ_G0020558.1 mouse_genomes_project 13 60833496 60838093 - MGP_LPJ_P0037248 Ctsll3 protein_coding protein_coding MGP_LPJ_T0036283.1 MGP_LPJ_G0020168.1 mouse_genomes_project 13 18615955 18616909 + MGP_LPJ_P0036283 Olfr263 protein_coding protein_coding MGP_LPJ_T0036332.1 MGP_LPJ_G0020195.1 mouse_genomes_project 13 19235545 19236055 + MGP_LPJ_P0036332 Hist1h2bm protein_coding protein_coding MGP_LPJ_T0006561.1 MGP_LPJ_G0005447.1 mouse_genomes_project 13 30572951 30576731 - Gm11381 lincRNA lincRNA MGP_LPJ_T0037165.1 MGP_LPJ_G0020536.1 mouse_genomes_project 13 58056128 58062095 + MGP_LPJ_P0037165 Idnk protein_coding protein_coding MGP_LPJ_T0036574.1 MGP_LPJ_G0020333.1 mouse_genomes_project 13 30904073 30985522 - MGP_LPJ_P0036574 Mylk4 protein_coding protein_coding MGP_LPJ_T0036575.1 MGP_LPJ_G0020333.1 mouse_genomes_project 13 30908945 30985459 - MGP_LPJ_P0036575 Mylk4 protein_coding protein_coding MGP_LPJ_T0036576.1 MGP_LPJ_G0020333.1 mouse_genomes_project 13 30913132 30941285 - MGP_LPJ_P0036576 Mylk4 protein_coding unknown_likely_coding MGP_LPJ_T0036577.1 MGP_LPJ_G0020333.1 mouse_genomes_project 13 30970258 30987697 - Mylk4 protein_coding processed_transcript MGP_LPJ_T0101855.1 MGP_LPJ_G0039892.1 mouse_genomes_project 13 31839540 31859870 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0037506.1 MGP_LPJ_G0020677.1 mouse_genomes_project 13 76779747 76810396 + MGP_LPJ_P0037506 Spata9 protein_coding protein_coding MGP_LPJ_T0036151.1 MGP_LPJ_G0020122.1 mouse_genomes_project 13 5687265 5691621 + MGP_LPJ_P0036151 protein_coding protein_coding MGP_LPJ_T0006537.1 MGP_LPJ_G0005431.1 mouse_genomes_project 13 23757366 23767070 - Gm11351 lincRNA lincRNA MGP_LPJ_T0000934.1 MGP_LPJ_G0000862.1 mouse_genomes_project 13 104176801 104178735 - TEC TEC MGP_LPJ_T0036570.1 MGP_LPJ_G0020332.1 mouse_genomes_project 13 29979199 30536887 - MGP_LPJ_P0036570 Gmds protein_coding protein_coding MGP_LPJ_T0036571.1 MGP_LPJ_G0020332.1 mouse_genomes_project 13 30276065 30536760 - Gmds protein_coding retained_intron MGP_LPJ_T0036572.1 MGP_LPJ_G0020332.1 mouse_genomes_project 13 30342055 30422074 - Gmds protein_coding processed_transcript MGP_LPJ_T0036573.1 MGP_LPJ_G0020332.1 mouse_genomes_project 13 30420063 30536799 - MGP_LPJ_P0036573 Gmds protein_coding nonsense_mediated_decay MGP_LPJ_T0006571.1 MGP_LPJ_G0005455.1 mouse_genomes_project 13 40094999 40105466 + Gm26877 lincRNA lincRNA MGP_LPJ_T0037557.1 MGP_LPJ_G0020691.1 mouse_genomes_project 13 82663271 82701090 - MGP_LPJ_P0037557 Polr3g protein_coding protein_coding MGP_LPJ_T0037558.1 MGP_LPJ_G0020691.1 mouse_genomes_project 13 82663308 82676685 - Polr3g protein_coding retained_intron MGP_LPJ_T0037559.1 MGP_LPJ_G0020691.1 mouse_genomes_project 13 82683217 82701033 - MGP_LPJ_P0037559 Polr3g protein_coding nonsense_mediated_decay MGP_LPJ_T0037560.1 MGP_LPJ_G0020691.1 mouse_genomes_project 13 82683654 82701022 - MGP_LPJ_P0037560 Polr3g protein_coding protein_coding MGP_LPJ_T0037561.1 MGP_LPJ_G0020691.1 mouse_genomes_project 13 82689458 82701079 - Polr3g protein_coding retained_intron MGP_LPJ_T0097985.1 MGP_LPJ_G0036266.1 mouse_genomes_project 13 9625951 9626358 - pseudogene pseudogene MGP_LPJ_T0037406.1 MGP_LPJ_G0020632.1 mouse_genomes_project 13 69097204 69107256 + MGP_LPJ_P0037406 Fastkd3 protein_coding protein_coding MGP_LPJ_T0037407.1 MGP_LPJ_G0020632.1 mouse_genomes_project 13 69097402 69107264 + MGP_LPJ_P0037407 Fastkd3 protein_coding unknown_likely_coding MGP_LPJ_T0037794.1 MGP_LPJ_G0020758.1 mouse_genomes_project 13 98719079 98731259 - MGP_LPJ_P0037794 1700029F12Rik protein_coding protein_coding MGP_LPJ_T0036383.1 MGP_LPJ_G0020237.1 mouse_genomes_project 13 20737353 20738250 + MGP_LPJ_P0036383 Vmn1r216 protein_coding protein_coding MGP_LPJ_T0037973.1 MGP_LPJ_G0020813.1 mouse_genomes_project 13 107246229 107290905 + MGP_LPJ_P0037973 4933425L06Rik protein_coding protein_coding MGP_LPJ_T0097988.1 MGP_LPJ_G0036269.1 mouse_genomes_project 13 92606577 92607004 + pseudogene pseudogene MGP_LPJ_T0036828.1 MGP_LPJ_G0020431.1 mouse_genomes_project 13 47648410 47649700 + MGP_LPJ_P0036828 A830005F24Rik protein_coding protein_coding MGP_LPJ_T0037156.1 MGP_LPJ_G0020533.1 mouse_genomes_project 13 57281576 57793250 - MGP_LPJ_P0037156 Spock1 protein_coding protein_coding MGP_LPJ_T0037157.1 MGP_LPJ_G0020533.1 mouse_genomes_project 13 57281588 57793211 - MGP_LPJ_P0037157 Spock1 protein_coding protein_coding MGP_LPJ_T0037158.1 MGP_LPJ_G0020533.1 mouse_genomes_project 13 57286484 57793211 - MGP_LPJ_P0037158 Spock1 protein_coding protein_coding MGP_LPJ_T0037159.1 MGP_LPJ_G0020533.1 mouse_genomes_project 13 57289094 57793227 - MGP_LPJ_P0037159 Spock1 protein_coding protein_coding MGP_LPJ_T0037160.1 MGP_LPJ_G0020533.1 mouse_genomes_project 13 57289679 57792523 - MGP_LPJ_P0037160 Spock1 protein_coding protein_coding MGP_LPJ_T0037161.1 MGP_LPJ_G0020533.1 mouse_genomes_project 13 57294794 57793235 - Spock1 protein_coding retained_intron MGP_LPJ_T0100286.1 MGP_LPJ_G0038549.1 mouse_genomes_project 13 70743095 70743223 + Gm26018 snoRNA snoRNA MGP_LPJ_T0006586.1 MGP_LPJ_G0005466.1 mouse_genomes_project 13 51500183 51503528 + Gm26651 lincRNA lincRNA MGP_LPJ_T0036598.1 MGP_LPJ_G0020347.1 mouse_genomes_project 13 32002580 32020330 + MGP_LPJ_P0036598 Serpinb6d protein_coding protein_coding MGP_LPJ_T0036642.1 MGP_LPJ_G0020362.1 mouse_genomes_project 13 33299848 33344017 + MGP_LPJ_P0036642 4933417A18Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0036643.1 MGP_LPJ_G0020362.1 mouse_genomes_project 13 33299848 33341339 + MGP_LPJ_P0036643 4933417A18Rik protein_coding protein_coding MGP_LPJ_T0037363.1 MGP_LPJ_G0020606.1 mouse_genomes_project 13 67540178 67595478 + MGP_LPJ_P0037363 protein_coding protein_coding MGP_LPJ_T0036339.1 MGP_LPJ_G0020202.1 mouse_genomes_project 13 19303542 19359033 + MGP_LPJ_P0036339 Hist1h2br protein_coding protein_coding MGP_LPJ_T0098158.1 MGP_LPJ_G0036439.1 mouse_genomes_project 13 116075493 116075594 + Gm22385 rRNA rRNA MGP_LPJ_T0037614.1 MGP_LPJ_G0020699.1 mouse_genomes_project 13 90094550 90489793 + MGP_LPJ_P0037614 Edil3 protein_coding protein_coding MGP_LPJ_T0037615.1 MGP_LPJ_G0020699.1 mouse_genomes_project 13 90094566 90420703 + Edil3 protein_coding processed_transcript MGP_LPJ_T0037616.1 MGP_LPJ_G0020699.1 mouse_genomes_project 13 90094589 90620593 + MGP_LPJ_P0037616 Edil3 protein_coding protein_coding MGP_LPJ_T0037617.1 MGP_LPJ_G0020699.1 mouse_genomes_project 13 90094635 90258736 + Edil3 protein_coding retained_intron MGP_LPJ_T0037618.1 MGP_LPJ_G0020699.1 mouse_genomes_project 13 90094638 90104384 + Edil3 protein_coding processed_transcript MGP_LPJ_T0037619.1 MGP_LPJ_G0020699.1 mouse_genomes_project 13 90094692 90326355 + Edil3 protein_coding retained_intron MGP_LPJ_T0037620.1 MGP_LPJ_G0020699.1 mouse_genomes_project 13 90094696 90379006 + Edil3 protein_coding retained_intron MGP_LPJ_T0037621.1 MGP_LPJ_G0020699.1 mouse_genomes_project 13 90094720 90620593 + MGP_LPJ_P0037621 Edil3 protein_coding protein_coding MGP_LPJ_T0036727.1 MGP_LPJ_G0020397.1 mouse_genomes_project 13 40356186 40393572 + MGP_LPJ_P0036727 Tmem170b protein_coding protein_coding MGP_LPJ_T0037688.1 MGP_LPJ_G0020718.1 mouse_genomes_project 13 93913180 93959531 - MGP_LPJ_P0037688 Zfyve16 protein_coding protein_coding MGP_LPJ_T0037689.1 MGP_LPJ_G0020718.1 mouse_genomes_project 13 93913868 93944452 - Zfyve16 protein_coding retained_intron MGP_LPJ_T0037690.1 MGP_LPJ_G0020718.1 mouse_genomes_project 13 93935687 93937001 - Zfyve16 protein_coding retained_intron MGP_LPJ_T0037691.1 MGP_LPJ_G0020718.1 mouse_genomes_project 13 93941164 93949517 - Zfyve16 protein_coding processed_transcript MGP_LPJ_T0012881.1 MGP_LPJ_G0010972.1 mouse_genomes_project 13 21964163 21964762 + processed_pseudogene processed_pseudogene MGP_LPJ_T0036341.1 MGP_LPJ_G0020204.1 mouse_genomes_project 13 19353277 19353679 - MGP_LPJ_P0036341 Hist1h4m protein_coding protein_coding MGP_LPJ_T0037108.1 MGP_LPJ_G0020514.1 mouse_genomes_project 13 55368519 55378838 + MGP_LPJ_P0037108 Caml protein_coding unknown_likely_coding MGP_LPJ_T0037109.1 MGP_LPJ_G0020514.1 mouse_genomes_project 13 55368999 55371050 + Caml protein_coding retained_intron MGP_LPJ_T0037110.1 MGP_LPJ_G0020514.1 mouse_genomes_project 13 55374735 55378836 + Caml protein_coding retained_intron MGP_LPJ_T0000924.1 MGP_LPJ_G0000852.1 mouse_genomes_project 13 91587466 91587981 + TEC TEC MGP_LPJ_T0037522.1 MGP_LPJ_G0020683.1 mouse_genomes_project 13 77869102 77966183 - MGP_LPJ_P0037522 Slf1 protein_coding protein_coding MGP_LPJ_T0037523.1 MGP_LPJ_G0020683.1 mouse_genomes_project 13 77869987 77873410 - Slf1 protein_coding retained_intron MGP_LPJ_T0037524.1 MGP_LPJ_G0020683.1 mouse_genomes_project 13 77926977 77966175 - MGP_LPJ_P0037524 Slf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0037525.1 MGP_LPJ_G0020683.1 mouse_genomes_project 13 77934609 77966175 - MGP_LPJ_P0037525 Slf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0037526.1 MGP_LPJ_G0020683.1 mouse_genomes_project 13 77935567 77962193 - MGP_LPJ_P0037526 Slf1 protein_coding protein_coding MGP_LPJ_T0037527.1 MGP_LPJ_G0020683.1 mouse_genomes_project 13 77935653 77966148 - MGP_LPJ_P0037527 Slf1 protein_coding protein_coding MGP_LPJ_T0037528.1 MGP_LPJ_G0020683.1 mouse_genomes_project 13 77937187 77966170 - Slf1 protein_coding retained_intron MGP_LPJ_T0037380.1 MGP_LPJ_G0020617.1 mouse_genomes_project 13 67880251 67892624 - MGP_LPJ_P0037380 protein_coding protein_coding MGP_LPJ_T0012895.1 MGP_LPJ_G0010986.1 mouse_genomes_project 13 26541376 26541865 - processed_pseudogene processed_pseudogene MGP_LPJ_T0037351.1 MGP_LPJ_G0020600.1 mouse_genomes_project 13 67281764 67344668 + MGP_LPJ_P0037351 Ptdss1 protein_coding protein_coding MGP_LPJ_T0037259.1 MGP_LPJ_G0020567.1 mouse_genomes_project 13 61222917 61231199 - MGP_LPJ_P0037259 Cts6 protein_coding protein_coding MGP_LPJ_T0012946.1 MGP_LPJ_G0011037.1 mouse_genomes_project 13 100839338 100839665 + processed_pseudogene processed_pseudogene MGP_LPJ_T0037353.1 MGP_LPJ_G0020602.1 mouse_genomes_project 13 67413717 67428323 - MGP_LPJ_P0037353 protein_coding protein_coding MGP_LPJ_T0037357.1 MGP_LPJ_G0020602.1 mouse_genomes_project 13 67413720 67428356 - MGP_LPJ_P0037357 protein_coding protein_coding MGP_LPJ_T0000908.1 MGP_LPJ_G0000837.1 mouse_genomes_project 13 36039412 36039753 - TEC TEC MGP_LPJ_T0036946.1 MGP_LPJ_G0020469.1 mouse_genomes_project 13 52936203 52981765 - MGP_LPJ_P0036946 Sptlc1 protein_coding protein_coding MGP_LPJ_T0006564.1 MGP_LPJ_G0005449.1 mouse_genomes_project 13 35932649 35935096 - Gm4035 lincRNA lincRNA MGP_LPJ_T0006565.1 MGP_LPJ_G0005449.1 mouse_genomes_project 13 35932761 35946338 - Gm4035 lincRNA lincRNA MGP_LPJ_T0099010.1 MGP_LPJ_G0037273.1 mouse_genomes_project 13 11246142 11246249 + Gm26129 snRNA snRNA MGP_LPJ_T0012906.1 MGP_LPJ_G0010997.1 mouse_genomes_project 13 31866153 31866500 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006621.1 MGP_LPJ_G0005488.1 mouse_genomes_project 13 82766733 82771710 - Gm17259 lincRNA lincRNA MGP_LPJ_T0037396.1 MGP_LPJ_G0020625.1 mouse_genomes_project 13 68203144 68222899 - MGP_LPJ_P0037396 protein_coding protein_coding MGP_LPJ_T0037397.1 MGP_LPJ_G0020625.1 mouse_genomes_project 13 68203145 68222989 - MGP_LPJ_P0037397 protein_coding protein_coding MGP_LPJ_T0036644.1 MGP_LPJ_G0020363.1 mouse_genomes_project 13 33333812 33362088 - MGP_LPJ_P0036644 Eci3 protein_coding protein_coding MGP_LPJ_T0006643.1 MGP_LPJ_G0005502.1 mouse_genomes_project 13 100288448 100289310 - Gm29501 lincRNA lincRNA MGP_LPJ_T0036562.1 MGP_LPJ_G0020325.1 mouse_genomes_project 13 28942209 29080042 - MGP_LPJ_P0036562 Exoc2 protein_coding protein_coding MGP_LPJ_T0036563.1 MGP_LPJ_G0020325.1 mouse_genomes_project 13 28942209 29107716 - MGP_LPJ_P0036563 Exoc2 protein_coding protein_coding MGP_LPJ_T0038152.1 MGP_LPJ_G0020881.1 mouse_genomes_project 13 122855384 122856110 - MGP_LPJ_P0038152 protein_coding protein_coding MGP_LPJ_T0036794.1 MGP_LPJ_G0020422.1 mouse_genomes_project 13 45688653 45737285 - MGP_LPJ_P0036794 Nup153 protein_coding protein_coding MGP_LPJ_T0036795.1 MGP_LPJ_G0020422.1 mouse_genomes_project 13 45689823 45690701 - Nup153 protein_coding retained_intron MGP_LPJ_T0036796.1 MGP_LPJ_G0020422.1 mouse_genomes_project 13 45691593 45692763 - Nup153 protein_coding retained_intron MGP_LPJ_T0036797.1 MGP_LPJ_G0020422.1 mouse_genomes_project 13 45708365 45710848 - Nup153 protein_coding retained_intron MGP_LPJ_T0036798.1 MGP_LPJ_G0020422.1 mouse_genomes_project 13 45718624 45726608 - Nup153 protein_coding processed_transcript MGP_LPJ_T0036330.1 MGP_LPJ_G0020193.1 mouse_genomes_project 13 19230015 19230428 + MGP_LPJ_P0036330 Hist1h2ai protein_coding protein_coding MGP_LPJ_T0009974.1 MGP_LPJ_G0008092.1 mouse_genomes_project 13 96048444 96048558 + Gm25109 miRNA miRNA MGP_LPJ_T0036789.1 MGP_LPJ_G0020419.1 mouse_genomes_project 13 45410521 45427126 + MGP_LPJ_P0036789 Rbm24 protein_coding protein_coding MGP_LPJ_T0012923.1 MGP_LPJ_G0011014.1 mouse_genomes_project 13 68291734 68292518 + processed_pseudogene processed_pseudogene MGP_LPJ_T0038038.1 MGP_LPJ_G0020828.1 mouse_genomes_project 13 112828289 112832821 - MGP_LPJ_P0038038 Gapt protein_coding protein_coding MGP_LPJ_T0036587.1 MGP_LPJ_G0020339.1 mouse_genomes_project 13 31225720 31242213 + MGP_LPJ_P0036587 Serpinb9 protein_coding protein_coding MGP_LPJ_T0036588.1 MGP_LPJ_G0020339.1 mouse_genomes_project 13 31227018 31242211 + MGP_LPJ_P0036588 Serpinb9 protein_coding protein_coding MGP_LPJ_T0037261.1 MGP_LPJ_G0020569.1 mouse_genomes_project 13 61373949 61380232 - MGP_LPJ_P0037261 Cts7 protein_coding protein_coding MGP_LPJ_T0006546.1 MGP_LPJ_G0005436.1 mouse_genomes_project 13 28160271 28166264 + Gm11368 lincRNA lincRNA MGP_LPJ_T0036526.1 MGP_LPJ_G0020309.1 mouse_genomes_project 13 25524461 25537612 - MGP_LPJ_P0036526 Prl7a1 protein_coding protein_coding MGP_LPJ_T0036527.1 MGP_LPJ_G0020309.1 mouse_genomes_project 13 25524461 25537602 - MGP_LPJ_P0036527 Prl7a1 protein_coding protein_coding MGP_LPJ_T0038078.1 MGP_LPJ_G0020845.1 mouse_genomes_project 13 115675882 115679096 + MGP_LPJ_P0038078 Cdc20b protein_coding protein_coding MGP_LPJ_T0038079.1 MGP_LPJ_G0020845.1 mouse_genomes_project 13 115676150 115746883 + MGP_LPJ_P0038079 Cdc20b protein_coding protein_coding MGP_LPJ_T0038080.1 MGP_LPJ_G0020845.1 mouse_genomes_project 13 115676150 115746883 + MGP_LPJ_P0038080 Cdc20b protein_coding protein_coding MGP_LPJ_T0038081.1 MGP_LPJ_G0020845.1 mouse_genomes_project 13 115676150 115746883 + MGP_LPJ_P0038081 Cdc20b protein_coding protein_coding MGP_LPJ_T0038082.1 MGP_LPJ_G0020845.1 mouse_genomes_project 13 115676158 115679096 + MGP_LPJ_P0038082 Cdc20b protein_coding protein_coding MGP_LPJ_T0036734.1 MGP_LPJ_G0020401.1 mouse_genomes_project 13 41080872 41088741 + MGP_LPJ_P0036734 Edn1 protein_coding protein_coding MGP_LPJ_T0009960.1 MGP_LPJ_G0008078.1 mouse_genomes_project 13 62994819 62994902 + Gm24588 miRNA miRNA MGP_LPJ_T0009979.1 MGP_LPJ_G0008097.1 mouse_genomes_project 13 112368948 112369028 + Mir1904 miRNA miRNA MGP_LPJ_T0012938.1 MGP_LPJ_G0011029.1 mouse_genomes_project 13 85835330 85836109 - processed_pseudogene processed_pseudogene MGP_LPJ_T0036579.1 MGP_LPJ_G0020335.1 mouse_genomes_project 13 31010871 31011264 - MGP_LPJ_P0036579 D930007J09Rik protein_coding protein_coding MGP_LPJ_T0036980.1 MGP_LPJ_G0020482.1 mouse_genomes_project 13 54273600 54293736 - MGP_LPJ_P0036980 Cltb protein_coding protein_coding MGP_LPJ_T0036981.1 MGP_LPJ_G0020482.1 mouse_genomes_project 13 54274737 54280361 - MGP_LPJ_P0036981 Cltb protein_coding protein_coding MGP_LPJ_T0036982.1 MGP_LPJ_G0020482.1 mouse_genomes_project 13 54274784 54293684 - MGP_LPJ_P0036982 Cltb protein_coding protein_coding MGP_LPJ_T0036983.1 MGP_LPJ_G0020482.1 mouse_genomes_project 13 54277239 54293684 - Cltb protein_coding retained_intron MGP_LPJ_T0012924.1 MGP_LPJ_G0011015.1 mouse_genomes_project 13 69337754 69338508 + processed_pseudogene processed_pseudogene MGP_LPJ_T0036398.1 MGP_LPJ_G0020246.1 mouse_genomes_project 13 21269177 21270075 + MGP_LPJ_P0036398 Hist1h4h protein_coding protein_coding MGP_LPJ_T0000928.1 MGP_LPJ_G0000856.1 mouse_genomes_project 13 100334255 100334830 - TEC TEC MGP_LPJ_T0038094.1 MGP_LPJ_G0020853.1 mouse_genomes_project 13 116343631 116344412 - MGP_LPJ_P0038094 Hspb3 protein_coding protein_coding MGP_LPJ_T0037501.1 MGP_LPJ_G0020674.1 mouse_genomes_project 13 76520911 76589198 + MGP_LPJ_P0037501 Ell2 protein_coding protein_coding MGP_LPJ_T0036779.1 MGP_LPJ_G0020413.1 mouse_genomes_project 13 44000753 44002925 + MGP_LPJ_P0036779 protein_coding protein_coding MGP_LPJ_T0036406.1 MGP_LPJ_G0020254.1 mouse_genomes_project 13 21315083 21315375 - MGP_LPJ_P0036406 protein_coding protein_coding MGP_LPJ_T0006578.1 MGP_LPJ_G0005460.1 mouse_genomes_project 13 44929091 44930347 + 5033430I15Rik lincRNA lincRNA MGP_LPJ_T0006579.1 MGP_LPJ_G0005460.1 mouse_genomes_project 13 44929189 44930016 + 5033430I15Rik lincRNA lincRNA MGP_LPJ_T0011369.1 MGP_LPJ_G0009487.1 mouse_genomes_project 13 50465193 50465319 + Gm22199 misc_RNA misc_RNA MGP_LPJ_T0037319.1 MGP_LPJ_G0020584.1 mouse_genomes_project 13 64668239 64675201 - MGP_LPJ_P0037319 Ctsl protein_coding protein_coding MGP_LPJ_T0036356.1 MGP_LPJ_G0020210.1 mouse_genomes_project 13 19584449 19584886 - MGP_LPJ_P0036356 Hist1h2ah protein_coding protein_coding MGP_LPJ_T0012935.1 MGP_LPJ_G0011026.1 mouse_genomes_project 13 81012124 81013283 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006657.1 MGP_LPJ_G0005515.1 mouse_genomes_project 13 114433118 114437527 + Gm15326 lincRNA lincRNA MGP_LPJ_T0006658.1 MGP_LPJ_G0005515.1 mouse_genomes_project 13 114436729 114440320 + Gm15326 lincRNA lincRNA MGP_LPJ_T0006547.1 MGP_LPJ_G0005437.1 mouse_genomes_project 13 28738800 28749905 + 4930519D14Rik lincRNA lincRNA MGP_LPJ_T0011377.1 MGP_LPJ_G0009495.1 mouse_genomes_project 13 104289606 104289890 + Gm25808 misc_RNA misc_RNA MGP_LPJ_T0036126.1 MGP_LPJ_G0020118.1 mouse_genomes_project 13 4925085 5501376 + MGP_LPJ_P0036126 Adarb2 protein_coding protein_coding MGP_LPJ_T0036127.1 MGP_LPJ_G0020118.1 mouse_genomes_project 13 4925127 5055862 + MGP_LPJ_P0036127 Adarb2 protein_coding protein_coding MGP_LPJ_T0036128.1 MGP_LPJ_G0020118.1 mouse_genomes_project 13 4925132 5503052 + MGP_LPJ_P0036128 Adarb2 protein_coding protein_coding MGP_LPJ_T0036129.1 MGP_LPJ_G0020118.1 mouse_genomes_project 13 5286445 5497264 + MGP_LPJ_P0036129 Adarb2 protein_coding protein_coding MGP_LPJ_T0036400.1 MGP_LPJ_G0020248.1 mouse_genomes_project 13 21281730 21282369 - MGP_LPJ_P0036400 Hist1h2bh protein_coding protein_coding MGP_LPJ_T0036192.1 MGP_LPJ_G0020131.1 mouse_genomes_project 13 9254269 9301850 + MGP_LPJ_P0036192 Heatr1 protein_coding protein_coding MGP_LPJ_T0006540.1 MGP_LPJ_G0005433.1 mouse_genomes_project 13 25175892 25189935 + 4930511O05Rik lincRNA lincRNA MGP_LPJ_T0006548.1 MGP_LPJ_G0005438.1 mouse_genomes_project 13 29349734 29362899 - 4930401O12Rik lincRNA lincRNA MGP_LPJ_T0037996.1 MGP_LPJ_G0020819.1 mouse_genomes_project 13 109312165 109313874 + MGP_LPJ_P0037996 3830408C21Rik protein_coding protein_coding MGP_LPJ_T0037088.1 MGP_LPJ_G0020508.1 mouse_genomes_project 13 55238268 55255849 - MGP_LPJ_P0037088 Pdlim7 protein_coding nonsense_mediated_decay MGP_LPJ_T0037089.1 MGP_LPJ_G0020508.1 mouse_genomes_project 13 55239961 55255845 - Pdlim7 protein_coding retained_intron MGP_LPJ_T0037090.1 MGP_LPJ_G0020508.1 mouse_genomes_project 13 55240865 55248853 - MGP_LPJ_P0037090 Pdlim7 protein_coding unknown_likely_coding MGP_LPJ_T0037091.1 MGP_LPJ_G0020508.1 mouse_genomes_project 13 55240869 55255848 - Pdlim7 protein_coding retained_intron MGP_LPJ_T0037092.1 MGP_LPJ_G0020508.1 mouse_genomes_project 13 55240873 55255857 - MGP_LPJ_P0037092 Pdlim7 protein_coding protein_coding MGP_LPJ_T0037093.1 MGP_LPJ_G0020508.1 mouse_genomes_project 13 55249210 55255849 - MGP_LPJ_P0037093 Pdlim7 protein_coding protein_coding MGP_LPJ_T0037094.1 MGP_LPJ_G0020508.1 mouse_genomes_project 13 55249211 55255849 - MGP_LPJ_P0037094 Pdlim7 protein_coding protein_coding MGP_LPJ_T0037095.1 MGP_LPJ_G0020508.1 mouse_genomes_project 13 55249211 55255845 - MGP_LPJ_P0037095 Pdlim7 protein_coding protein_coding MGP_LPJ_T0037096.1 MGP_LPJ_G0020508.1 mouse_genomes_project 13 55249989 55251431 - Pdlim7 protein_coding retained_intron MGP_LPJ_T0037097.1 MGP_LPJ_G0020508.1 mouse_genomes_project 13 55250670 55256087 - MGP_LPJ_P0037097 Pdlim7 protein_coding protein_coding MGP_LPJ_T0037098.1 MGP_LPJ_G0020508.1 mouse_genomes_project 13 55251220 55255832 - Pdlim7 protein_coding retained_intron MGP_LPJ_T0037099.1 MGP_LPJ_G0020508.1 mouse_genomes_project 13 55251376 55255120 - MGP_LPJ_P0037099 Pdlim7 protein_coding protein_coding MGP_LPJ_T0036664.1 MGP_LPJ_G0020369.1 mouse_genomes_project 13 34644067 35001177 + MGP_LPJ_P0036664 Fars2 protein_coding protein_coding MGP_LPJ_T0036404.1 MGP_LPJ_G0020252.1 mouse_genomes_project 13 21304754 21306879 - MGP_LPJ_P0036404 Hist1h3c protein_coding protein_coding MGP_LPJ_T0012954.1 MGP_LPJ_G0011045.1 mouse_genomes_project 13 115517193 115518150 + processed_pseudogene processed_pseudogene MGP_LPJ_T0037030.1 MGP_LPJ_G0020490.1 mouse_genomes_project 13 54658288 54716012 + MGP_LPJ_P0037030 Unc5a protein_coding protein_coding MGP_LPJ_T0037031.1 MGP_LPJ_G0020490.1 mouse_genomes_project 13 54658288 54716012 + MGP_LPJ_P0037031 Unc5a protein_coding protein_coding MGP_LPJ_T0037032.1 MGP_LPJ_G0020490.1 mouse_genomes_project 13 54706535 54709779 + MGP_LPJ_P0037032 Unc5a protein_coding protein_coding MGP_LPJ_T0037033.1 MGP_LPJ_G0020490.1 mouse_genomes_project 13 54713003 54714647 + Unc5a protein_coding retained_intron MGP_LPJ_T0037034.1 MGP_LPJ_G0020490.1 mouse_genomes_project 13 54713673 54715480 + MGP_LPJ_P0037034 Unc5a protein_coding protein_coding MGP_LPJ_T0006569.1 MGP_LPJ_G0005453.1 mouse_genomes_project 13 37582044 37587690 - Gm26514 lincRNA lincRNA MGP_LPJ_T0037331.1 MGP_LPJ_G0020593.1 mouse_genomes_project 13 65450548 65451475 + MGP_LPJ_P0037331 Olfr466 protein_coding protein_coding MGP_LPJ_T0036696.1 MGP_LPJ_G0020381.1 mouse_genomes_project 13 37205983 37241871 - MGP_LPJ_P0036696 Bloc1s5 protein_coding protein_coding MGP_LPJ_T0099036.1 MGP_LPJ_G0037299.1 mouse_genomes_project 13 91258972 91259074 - Gm24498 snRNA snRNA MGP_LPJ_T0036564.1 MGP_LPJ_G0020326.1 mouse_genomes_project 13 29076314 29077501 - MGP_LPJ_P0036564 Hus1b protein_coding protein_coding MGP_LPJ_T0037263.1 MGP_LPJ_G0020571.1 mouse_genomes_project 13 61580927 61586432 - MGP_LPJ_P0037263 Cts3 protein_coding protein_coding MGP_LPJ_T0036618.1 MGP_LPJ_G0020351.1 mouse_genomes_project 13 32294035 32319535 + MGP_LPJ_P0036618 Nqo2 protein_coding protein_coding MGP_LPJ_T0036619.1 MGP_LPJ_G0020351.1 mouse_genomes_project 13 32294035 32319535 + MGP_LPJ_P0036619 Nqo2 protein_coding protein_coding MGP_LPJ_T0036358.1 MGP_LPJ_G0020212.1 mouse_genomes_project 13 19590214 19590944 - MGP_LPJ_P0036358 Hist1h4i protein_coding protein_coding MGP_LPJ_T0037639.1 MGP_LPJ_G0020704.1 mouse_genomes_project 13 91958030 91958396 + MGP_LPJ_P0037639 Gm21726 protein_coding protein_coding MGP_LPJ_T0037164.1 MGP_LPJ_G0020535.1 mouse_genomes_project 13 58023640 58027619 - MGP_LPJ_P0037164 Hnrnpa0 protein_coding protein_coding MGP_LPJ_T0036236.1 MGP_LPJ_G0020147.1 mouse_genomes_project 13 11830029 11839295 + MGP_LPJ_P0036236 AW209491 protein_coding protein_coding MGP_LPJ_T0036237.1 MGP_LPJ_G0020147.1 mouse_genomes_project 13 11830042 11839295 + MGP_LPJ_P0036237 AW209491 protein_coding protein_coding MGP_LPJ_T0037699.1 MGP_LPJ_G0020725.1 mouse_genomes_project 13 94753506 94839535 + MGP_LPJ_P0037699 Homer1 protein_coding protein_coding MGP_LPJ_T0037700.1 MGP_LPJ_G0020725.1 mouse_genomes_project 13 94753851 94819540 + MGP_LPJ_P0037700 Homer1 protein_coding protein_coding MGP_LPJ_T0037701.1 MGP_LPJ_G0020725.1 mouse_genomes_project 13 94754244 94812852 + MGP_LPJ_P0037701 Homer1 protein_coding protein_coding MGP_LPJ_T0037702.1 MGP_LPJ_G0020725.1 mouse_genomes_project 13 94754549 94858973 + MGP_LPJ_P0037702 Homer1 protein_coding protein_coding MGP_LPJ_T0037703.1 MGP_LPJ_G0020725.1 mouse_genomes_project 13 94754853 94857562 + MGP_LPJ_P0037703 Homer1 protein_coding protein_coding MGP_LPJ_T0037704.1 MGP_LPJ_G0020725.1 mouse_genomes_project 13 94754853 94857562 + MGP_LPJ_P0037704 Homer1 protein_coding protein_coding MGP_LPJ_T0037705.1 MGP_LPJ_G0020725.1 mouse_genomes_project 13 94754909 94859082 + MGP_LPJ_P0037705 Homer1 protein_coding protein_coding MGP_LPJ_T0037706.1 MGP_LPJ_G0020725.1 mouse_genomes_project 13 94754934 94818812 + MGP_LPJ_P0037706 Homer1 protein_coding protein_coding MGP_LPJ_T0037707.1 MGP_LPJ_G0020725.1 mouse_genomes_project 13 94755028 94857598 + MGP_LPJ_P0037707 Homer1 protein_coding protein_coding MGP_LPJ_T0037708.1 MGP_LPJ_G0020725.1 mouse_genomes_project 13 94755028 94857598 + MGP_LPJ_P0037708 Homer1 protein_coding protein_coding MGP_LPJ_T0037709.1 MGP_LPJ_G0020725.1 mouse_genomes_project 13 94757786 94859421 + MGP_LPJ_P0037709 Homer1 protein_coding protein_coding MGP_LPJ_T0037710.1 MGP_LPJ_G0020725.1 mouse_genomes_project 13 94836174 94857521 + MGP_LPJ_P0037710 Homer1 protein_coding unknown_likely_coding MGP_LPJ_T0012871.1 MGP_LPJ_G0010962.1 mouse_genomes_project 13 19494404 19495811 - processed_pseudogene processed_pseudogene MGP_LPJ_T0036402.1 MGP_LPJ_G0020250.1 mouse_genomes_project 13 21297985 21298729 + MGP_LPJ_P0036402 Hist1h1d protein_coding protein_coding MGP_LPJ_T0036223.1 MGP_LPJ_G0020143.1 mouse_genomes_project 13 11217742 11288162 + Arid4b protein_coding processed_transcript MGP_LPJ_T0036224.1 MGP_LPJ_G0020143.1 mouse_genomes_project 13 11218294 11338625 + MGP_LPJ_P0036224 Arid4b protein_coding protein_coding MGP_LPJ_T0036225.1 MGP_LPJ_G0020143.1 mouse_genomes_project 13 11218295 11386500 + MGP_LPJ_P0036225 Arid4b protein_coding protein_coding MGP_LPJ_T0036226.1 MGP_LPJ_G0020143.1 mouse_genomes_project 13 11218302 11386495 + MGP_LPJ_P0036226 Arid4b protein_coding protein_coding MGP_LPJ_T0036227.1 MGP_LPJ_G0020143.1 mouse_genomes_project 13 11218302 11386736 + MGP_LPJ_P0036227 Arid4b protein_coding protein_coding MGP_LPJ_T0036228.1 MGP_LPJ_G0020143.1 mouse_genomes_project 13 11218309 11334347 + MGP_LPJ_P0036228 Arid4b protein_coding protein_coding MGP_LPJ_T0036229.1 MGP_LPJ_G0020143.1 mouse_genomes_project 13 11218565 11282310 + Arid4b protein_coding processed_transcript MGP_LPJ_T0036230.1 MGP_LPJ_G0020143.1 mouse_genomes_project 13 11338643 11380858 + MGP_LPJ_P0036230 Arid4b protein_coding protein_coding MGP_LPJ_T0036231.1 MGP_LPJ_G0020143.1 mouse_genomes_project 13 11359599 11378367 + Arid4b protein_coding processed_transcript MGP_LPJ_T0036232.1 MGP_LPJ_G0020143.1 mouse_genomes_project 13 11378309 11384887 + Arid4b protein_coding processed_transcript MGP_LPJ_T0099031.1 MGP_LPJ_G0037294.1 mouse_genomes_project 13 56144538 56144642 - Gm24716 snRNA snRNA MGP_LPJ_T0036405.1 MGP_LPJ_G0020253.1 mouse_genomes_project 13 21315048 21315364 - MGP_LPJ_P0036405 protein_coding protein_coding MGP_LPJ_T0037104.1 MGP_LPJ_G0020513.1 mouse_genomes_project 13 55345002 55355553 + MGP_LPJ_P0037104 B4galt7 protein_coding protein_coding MGP_LPJ_T0037105.1 MGP_LPJ_G0020513.1 mouse_genomes_project 13 55345171 55353129 + B4galt7 protein_coding retained_intron MGP_LPJ_T0037106.1 MGP_LPJ_G0020513.1 mouse_genomes_project 13 55345171 55353913 + MGP_LPJ_P0037106 B4galt7 protein_coding protein_coding MGP_LPJ_T0037107.1 MGP_LPJ_G0020513.1 mouse_genomes_project 13 55345171 55355552 + MGP_LPJ_P0037107 B4galt7 protein_coding protein_coding MGP_LPJ_T0036488.1 MGP_LPJ_G0020289.1 mouse_genomes_project 13 22735921 22788401 + MGP_LPJ_P0036488 protein_coding unknown_likely_coding MGP_LPJ_T0036489.1 MGP_LPJ_G0020289.1 mouse_genomes_project 13 22754146 22761097 + protein_coding processed_transcript MGP_LPJ_T0036490.1 MGP_LPJ_G0020289.1 mouse_genomes_project 13 22777657 22789032 + MGP_LPJ_P0036490 protein_coding protein_coding MGP_LPJ_T0099022.1 MGP_LPJ_G0037285.1 mouse_genomes_project 13 34077138 34077280 + Gm22126 snRNA snRNA MGP_LPJ_T0036374.1 MGP_LPJ_G0020228.1 mouse_genomes_project 13 20023941 20024844 + MGP_LPJ_P0036374 Vmn1r201 protein_coding protein_coding MGP_LPJ_T0003528.1 MGP_LPJ_G0003214.1 mouse_genomes_project 13 120603495 120616340 - 4933413L06Rik antisense antisense MGP_LPJ_T0003529.1 MGP_LPJ_G0003214.1 mouse_genomes_project 13 120603758 120616316 - 4933413L06Rik antisense antisense MGP_LPJ_T0100272.1 MGP_LPJ_G0038535.1 mouse_genomes_project 13 29572657 29572782 + Gm23351 snoRNA snoRNA MGP_LPJ_T0036556.1 MGP_LPJ_G0020322.1 mouse_genomes_project 13 28656191 28662025 - MGP_LPJ_P0036556 Uqcrfs1 protein_coding protein_coding MGP_LPJ_T0036338.1 MGP_LPJ_G0020201.1 mouse_genomes_project 13 19303530 19358833 + MGP_LPJ_P0036338 Hist1h2bq protein_coding protein_coding MGP_LPJ_T0009959.1 MGP_LPJ_G0008077.1 mouse_genomes_project 13 62639225 62639332 + Gm22256 miRNA miRNA MGP_LPJ_T0006618.1 MGP_LPJ_G0005487.1 mouse_genomes_project 13 81926275 82102266 + 9330111N05Rik lincRNA lincRNA MGP_LPJ_T0006619.1 MGP_LPJ_G0005487.1 mouse_genomes_project 13 81927461 82046865 + 9330111N05Rik lincRNA lincRNA MGP_LPJ_T0006620.1 MGP_LPJ_G0005487.1 mouse_genomes_project 13 81944573 82104706 + 9330111N05Rik lincRNA lincRNA MGP_LPJ_T0037190.1 MGP_LPJ_G0020543.1 mouse_genomes_project 13 58460037 58472841 - MGP_LPJ_P0037190 Slc28a3 protein_coding nonsense_mediated_decay MGP_LPJ_T0037191.1 MGP_LPJ_G0020543.1 mouse_genomes_project 13 58467892 58529308 - MGP_LPJ_P0037191 Slc28a3 protein_coding protein_coding MGP_LPJ_T0037192.1 MGP_LPJ_G0020543.1 mouse_genomes_project 13 58496605 58529308 - MGP_LPJ_P0037192 Slc28a3 protein_coding nonsense_mediated_decay MGP_LPJ_T0037193.1 MGP_LPJ_G0020543.1 mouse_genomes_project 13 58499902 58529300 - Slc28a3 protein_coding retained_intron MGP_LPJ_T0036271.1 MGP_LPJ_G0020161.1 mouse_genomes_project 13 17066802 17122260 - MGP_LPJ_P0036271 Nme8 protein_coding protein_coding MGP_LPJ_T0036272.1 MGP_LPJ_G0020161.1 mouse_genomes_project 13 17066802 17122294 - MGP_LPJ_P0036272 Nme8 protein_coding protein_coding MGP_LPJ_T0036273.1 MGP_LPJ_G0020161.1 mouse_genomes_project 13 17098676 17113717 - Nme8 protein_coding processed_transcript MGP_LPJ_T0037168.1 MGP_LPJ_G0020538.1 mouse_genomes_project 13 58138318 58184465 - MGP_LPJ_P0037168 Gkap1 protein_coding protein_coding MGP_LPJ_T0036459.1 MGP_LPJ_G0020282.1 mouse_genomes_project 13 22369807 22528953 + MGP_LPJ_P0036459 Fam65b protein_coding protein_coding MGP_LPJ_T0036460.1 MGP_LPJ_G0020282.1 mouse_genomes_project 13 22405052 22496673 + Fam65b protein_coding retained_intron MGP_LPJ_T0036461.1 MGP_LPJ_G0020282.1 mouse_genomes_project 13 22405052 22500506 + MGP_LPJ_P0036461 Fam65b protein_coding protein_coding MGP_LPJ_T0036462.1 MGP_LPJ_G0020282.1 mouse_genomes_project 13 22405069 22500402 + MGP_LPJ_P0036462 Fam65b protein_coding nonsense_mediated_decay MGP_LPJ_T0036463.1 MGP_LPJ_G0020282.1 mouse_genomes_project 13 22429090 22528953 + MGP_LPJ_P0036463 Fam65b protein_coding protein_coding MGP_LPJ_T0036464.1 MGP_LPJ_G0020282.1 mouse_genomes_project 13 22429092 22465258 + Fam65b protein_coding retained_intron MGP_LPJ_T0036465.1 MGP_LPJ_G0020282.1 mouse_genomes_project 13 22429126 22492011 + MGP_LPJ_P0036465 Fam65b protein_coding protein_coding MGP_LPJ_T0036466.1 MGP_LPJ_G0020282.1 mouse_genomes_project 13 22429138 22500506 + MGP_LPJ_P0036466 Fam65b protein_coding protein_coding MGP_LPJ_T0036467.1 MGP_LPJ_G0020282.1 mouse_genomes_project 13 22429155 22490236 + Fam65b protein_coding retained_intron MGP_LPJ_T0036468.1 MGP_LPJ_G0020282.1 mouse_genomes_project 13 22466191 22471901 + Fam65b protein_coding retained_intron MGP_LPJ_T0036469.1 MGP_LPJ_G0020282.1 mouse_genomes_project 13 22469353 22471897 + Fam65b protein_coding retained_intron MGP_LPJ_T0036470.1 MGP_LPJ_G0020282.1 mouse_genomes_project 13 22481282 22488570 + Fam65b protein_coding retained_intron MGP_LPJ_T0036471.1 MGP_LPJ_G0020282.1 mouse_genomes_project 13 22504567 22510182 + Fam65b protein_coding retained_intron MGP_LPJ_T0037843.1 MGP_LPJ_G0020776.1 mouse_genomes_project 13 101064761 101129915 + MGP_LPJ_P0037843 Zfp366 protein_coding protein_coding MGP_LPJ_T0003453.1 MGP_LPJ_G0003169.1 mouse_genomes_project 13 20239906 20264647 + antisense antisense MGP_LPJ_T0036907.1 MGP_LPJ_G0020461.1 mouse_genomes_project 13 51181263 51197974 - MGP_LPJ_P0036907 Gm15440 protein_coding protein_coding MGP_LPJ_T0012899.1 MGP_LPJ_G0010990.1 mouse_genomes_project 13 28285252 28285681 + processed_pseudogene processed_pseudogene MGP_LPJ_T0036376.1 MGP_LPJ_G0020230.1 mouse_genomes_project 13 20101203 20102112 + MGP_LPJ_P0036376 Vmn1r204 protein_coding protein_coding MGP_LPJ_T0009977.1 MGP_LPJ_G0008095.1 mouse_genomes_project 13 110164652 110164824 - Gm22118 miRNA miRNA MGP_LPJ_T0036242.1 MGP_LPJ_G0020149.1 mouse_genomes_project 13 13250522 13267842 + MGP_LPJ_P0036242 Inhba protein_coding protein_coding MGP_LPJ_T0036243.1 MGP_LPJ_G0020149.1 mouse_genomes_project 13 13253146 13267865 + MGP_LPJ_P0036243 Inhba protein_coding protein_coding MGP_LPJ_T0006576.1 MGP_LPJ_G0005459.1 mouse_genomes_project 13 43329073 43347893 + 1700029N11Rik lincRNA lincRNA MGP_LPJ_T0006577.1 MGP_LPJ_G0005459.1 mouse_genomes_project 13 43329088 43347896 + 1700029N11Rik lincRNA lincRNA MGP_LPJ_T0038093.1 MGP_LPJ_G0020852.1 mouse_genomes_project 13 116273086 116299470 - MGP_LPJ_P0038093 Snx18 protein_coding protein_coding MGP_LPJ_T0036802.1 MGP_LPJ_G0020425.1 mouse_genomes_project 13 46052514 46074738 - MGP_LPJ_P0036802 Tpmt protein_coding protein_coding MGP_LPJ_T0036803.1 MGP_LPJ_G0020425.1 mouse_genomes_project 13 46052523 46074652 - MGP_LPJ_P0036803 Tpmt protein_coding protein_coding MGP_LPJ_T0036804.1 MGP_LPJ_G0020425.1 mouse_genomes_project 13 46052712 46076192 - MGP_LPJ_P0036804 Tpmt protein_coding nonsense_mediated_decay MGP_LPJ_T0036805.1 MGP_LPJ_G0020425.1 mouse_genomes_project 13 46059377 46074871 - MGP_LPJ_P0036805 Tpmt protein_coding protein_coding MGP_LPJ_T0036806.1 MGP_LPJ_G0020425.1 mouse_genomes_project 13 46059396 46076265 - MGP_LPJ_P0036806 Tpmt protein_coding protein_coding MGP_LPJ_T0036807.1 MGP_LPJ_G0020425.1 mouse_genomes_project 13 46071223 46074672 - Tpmt protein_coding retained_intron MGP_LPJ_T0036808.1 MGP_LPJ_G0020425.1 mouse_genomes_project 13 46071633 46074666 - MGP_LPJ_P0036808 Tpmt protein_coding protein_coding MGP_LPJ_T0038040.1 MGP_LPJ_G0020830.1 mouse_genomes_project 13 113776227 113778964 + MGP_LPJ_P0038040 Actbl2 protein_coding protein_coding MGP_LPJ_T0100278.1 MGP_LPJ_G0038541.1 mouse_genomes_project 13 47714055 47714187 - Gm25232 snoRNA snoRNA MGP_LPJ_T0036502.1 MGP_LPJ_G0020295.1 mouse_genomes_project 13 24962729 24977908 + MGP_LPJ_P0036502 protein_coding protein_coding MGP_LPJ_T0036504.1 MGP_LPJ_G0020295.1 mouse_genomes_project 13 24962753 24977972 + MGP_LPJ_P0036504 protein_coding protein_coding MGP_LPJ_T0006655.1 MGP_LPJ_G0005513.1 mouse_genomes_project 13 114415558 114417865 - Gm15325 lincRNA lincRNA MGP_LPJ_T0012867.1 MGP_LPJ_G0010958.1 mouse_genomes_project 13 19026203 19026878 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098493.1 MGP_LPJ_G0036770.1 mouse_genomes_project 13 92765205 92765658 - Gm29540 sense_intronic sense_intronic MGP_LPJ_T0012917.1 MGP_LPJ_G0011008.1 mouse_genomes_project 13 63694851 63695188 - processed_pseudogene processed_pseudogene MGP_LPJ_T0037499.1 MGP_LPJ_G0020673.1 mouse_genomes_project 13 75887351 75930038 + MGP_LPJ_P0037499 Pcsk1 protein_coding protein_coding MGP_LPJ_T0037500.1 MGP_LPJ_G0020673.1 mouse_genomes_project 13 75887441 75904130 + Pcsk1 protein_coding retained_intron MGP_LPJ_T0009966.1 MGP_LPJ_G0008084.1 mouse_genomes_project 13 77143771 77143847 - Gm24025 miRNA miRNA MGP_LPJ_T0037971.1 MGP_LPJ_G0020811.1 mouse_genomes_project 13 106995054 107017112 - MGP_LPJ_P0037971 Fam159b protein_coding protein_coding MGP_LPJ_T0036717.1 MGP_LPJ_G0020391.1 mouse_genomes_project 13 39822178 39830923 - MGP_LPJ_P0036717 Gcm2 protein_coding protein_coding MGP_LPJ_T0037062.1 MGP_LPJ_G0020497.1 mouse_genomes_project 13 55051924 55054682 - MGP_LPJ_P0037062 Rab24 protein_coding protein_coding MGP_LPJ_T0006647.1 MGP_LPJ_G0005506.1 mouse_genomes_project 13 101408457 101413362 + Gm26559 lincRNA lincRNA MGP_LPJ_T0012913.1 MGP_LPJ_G0011004.1 mouse_genomes_project 13 54173405 54173790 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000909.1 MGP_LPJ_G0000838.1 mouse_genomes_project 13 36714121 36715473 - TEC TEC MGP_LPJ_T0000910.1 MGP_LPJ_G0000838.1 mouse_genomes_project 13 36715125 36715473 - TEC TEC MGP_LPJ_T0012932.1 MGP_LPJ_G0011023.1 mouse_genomes_project 13 77524888 77526181 + processed_pseudogene processed_pseudogene MGP_LPJ_T0036424.1 MGP_LPJ_G0020268.1 mouse_genomes_project 13 21509114 21509511 + MGP_LPJ_P0036424 Hist1h4b protein_coding protein_coding MGP_LPJ_T0012894.1 MGP_LPJ_G0010985.1 mouse_genomes_project 13 25197986 25198940 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017288.1 MGP_LPJ_G0015165.1 mouse_genomes_project 13 22735181 22739198 + 9330162012Rik processed_transcript processed_transcript MGP_LPJ_T0006604.1 MGP_LPJ_G0005476.1 mouse_genomes_project 13 59710446 59713643 + 4930528D03Rik lincRNA lincRNA MGP_LPJ_T0006605.1 MGP_LPJ_G0005476.1 mouse_genomes_project 13 59710451 59715903 + 4930528D03Rik lincRNA lincRNA MGP_LPJ_T0006650.1 MGP_LPJ_G0005509.1 mouse_genomes_project 13 103633641 103634257 - Gm29341 lincRNA lincRNA MGP_LPJ_T0037370.1 MGP_LPJ_G0020611.1 mouse_genomes_project 13 67692087 67712517 - MGP_LPJ_P0037370 Zfp595 protein_coding protein_coding MGP_LPJ_T0037371.1 MGP_LPJ_G0020611.1 mouse_genomes_project 13 67692810 67712530 - MGP_LPJ_P0037371 Zfp595 protein_coding nonsense_mediated_decay MGP_LPJ_T0037372.1 MGP_LPJ_G0020611.1 mouse_genomes_project 13 67693522 67712506 - MGP_LPJ_P0037372 Zfp595 protein_coding protein_coding MGP_LPJ_T0037373.1 MGP_LPJ_G0020611.1 mouse_genomes_project 13 67693830 67712470 - MGP_LPJ_P0037373 Zfp595 protein_coding protein_coding MGP_LPJ_T0101865.1 MGP_LPJ_G0039902.1 mouse_genomes_project 13 58319860 58321711 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0097989.1 MGP_LPJ_G0036270.1 mouse_genomes_project 13 112150002 112150399 + pseudogene pseudogene MGP_LPJ_T0038131.1 MGP_LPJ_G0020870.1 mouse_genomes_project 13 122411606 122445980 + MGP_LPJ_P0038131 Paip1 protein_coding protein_coding MGP_LPJ_T0038132.1 MGP_LPJ_G0020870.1 mouse_genomes_project 13 122411794 122445084 + MGP_LPJ_P0038132 Paip1 protein_coding nonsense_mediated_decay MGP_LPJ_T0038133.1 MGP_LPJ_G0020870.1 mouse_genomes_project 13 122411808 122444970 + MGP_LPJ_P0038133 Paip1 protein_coding protein_coding MGP_LPJ_T0038134.1 MGP_LPJ_G0020870.1 mouse_genomes_project 13 122411808 122444846 + MGP_LPJ_P0038134 Paip1 protein_coding protein_coding MGP_LPJ_T0038135.1 MGP_LPJ_G0020870.1 mouse_genomes_project 13 122411833 122437841 + MGP_LPJ_P0038135 Paip1 protein_coding protein_coding MGP_LPJ_T0038136.1 MGP_LPJ_G0020870.1 mouse_genomes_project 13 122428198 122444784 + MGP_LPJ_P0038136 Paip1 protein_coding protein_coding MGP_LPJ_T0038137.1 MGP_LPJ_G0020870.1 mouse_genomes_project 13 122437328 122438852 + Paip1 protein_coding retained_intron MGP_LPJ_T0036525.1 MGP_LPJ_G0020308.1 mouse_genomes_project 13 25492850 25502379 - MGP_LPJ_P0036525 Prl7b1 protein_coding protein_coding MGP_LPJ_T0100300.1 MGP_LPJ_G0038563.1 mouse_genomes_project 13 101599196 101599327 - Gm24471 snoRNA snoRNA MGP_LPJ_T0037249.1 MGP_LPJ_G0020559.1 mouse_genomes_project 13 60874920 60893193 - MGP_LPJ_P0037249 4930486L24Rik protein_coding protein_coding MGP_LPJ_T0036721.1 MGP_LPJ_G0020393.1 mouse_genomes_project 13 39910346 39948395 - MGP_LPJ_P0036721 Elovl2 protein_coding protein_coding MGP_LPJ_T0036722.1 MGP_LPJ_G0020393.1 mouse_genomes_project 13 39910350 39948152 - MGP_LPJ_P0036722 Elovl2 protein_coding protein_coding MGP_LPJ_T0036724.1 MGP_LPJ_G0020395.1 mouse_genomes_project 13 40000693 40000868 - MGP_LPJ_P0036724 Gm17364 protein_coding protein_coding MGP_LPJ_T0037338.1 MGP_LPJ_G0020597.1 mouse_genomes_project 13 67245674 67250462 - MGP_LPJ_P0037338 Uqcrb protein_coding protein_coding MGP_LPJ_T0037339.1 MGP_LPJ_G0020597.1 mouse_genomes_project 13 67246121 67247857 - Uqcrb protein_coding processed_transcript MGP_LPJ_T0037429.1 MGP_LPJ_G0020643.1 mouse_genomes_project 13 72582845 72589543 - MGP_LPJ_P0037429 Irx1 protein_coding protein_coding MGP_LPJ_T0037308.1 MGP_LPJ_G0020579.1 mouse_genomes_project 13 64384582 64419198 - MGP_LPJ_P0037308 Slc35d2 protein_coding protein_coding MGP_LPJ_T0037497.1 MGP_LPJ_G0020672.1 mouse_genomes_project 13 75474490 75589883 - MGP_LPJ_P0037497 Cast protein_coding unknown_likely_coding MGP_LPJ_T0037498.1 MGP_LPJ_G0020672.1 mouse_genomes_project 13 75475050 75589294 - MGP_LPJ_P0037498 Cast protein_coding protein_coding MGP_LPJ_T0101845.1 MGP_LPJ_G0039882.1 mouse_genomes_project 13 20955825 20976602 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0036822.1 MGP_LPJ_G0020430.1 mouse_genomes_project 13 47619219 47648277 - MGP_LPJ_P0036822 protein_coding protein_coding MGP_LPJ_T0036823.1 MGP_LPJ_G0020430.1 mouse_genomes_project 13 47620774 47641780 - MGP_LPJ_P0036823 protein_coding protein_coding MGP_LPJ_T0036824.1 MGP_LPJ_G0020430.1 mouse_genomes_project 13 47621026 47648128 - MGP_LPJ_P0036824 protein_coding unknown_likely_coding MGP_LPJ_T0036825.1 MGP_LPJ_G0020430.1 mouse_genomes_project 13 47622824 47648251 - MGP_LPJ_P0036825 protein_coding protein_coding MGP_LPJ_T0036826.1 MGP_LPJ_G0020430.1 mouse_genomes_project 13 47622902 47648267 - MGP_LPJ_P0036826 protein_coding protein_coding MGP_LPJ_T0036827.1 MGP_LPJ_G0020430.1 mouse_genomes_project 13 47629743 47648292 - protein_coding retained_intron MGP_LPJ_T0036697.1 MGP_LPJ_G0020382.1 mouse_genomes_project 13 37253842 37266974 - MGP_LPJ_P0036697 Eef1e1 protein_coding protein_coding MGP_LPJ_T0100274.1 MGP_LPJ_G0038537.1 mouse_genomes_project 13 35131712 35131844 + Gm26395 snoRNA snoRNA MGP_LPJ_T0037130.1 MGP_LPJ_G0020522.1 mouse_genomes_project 13 55961527 55966709 - MGP_LPJ_P0037130 Tifab protein_coding protein_coding MGP_LPJ_T0037842.1 MGP_LPJ_G0020775.1 mouse_genomes_project 13 100851115 100851596 - MGP_LPJ_P0037842 1700024P04Rik protein_coding protein_coding MGP_LPJ_T0036900.1 MGP_LPJ_G0020459.1 mouse_genomes_project 13 51136980 51144063 + MGP_LPJ_P0036900 Cks2 protein_coding protein_coding MGP_LPJ_T0101846.1 MGP_LPJ_G0039883.1 mouse_genomes_project 13 21478703 21480260 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0036669.1 MGP_LPJ_G0020372.1 mouse_genomes_project 13 35859491 35929858 + MGP_LPJ_P0036669 Ly86 protein_coding protein_coding MGP_LPJ_T0036557.1 MGP_LPJ_G0020323.1 mouse_genomes_project 13 28785396 28838138 + MGP_LPJ_P0036557 Dusp22 protein_coding protein_coding MGP_LPJ_T0036558.1 MGP_LPJ_G0020323.1 mouse_genomes_project 13 28785458 28831633 + MGP_LPJ_P0036558 Dusp22 protein_coding protein_coding MGP_LPJ_T0036559.1 MGP_LPJ_G0020323.1 mouse_genomes_project 13 28785507 28834404 + MGP_LPJ_P0036559 Dusp22 protein_coding protein_coding MGP_LPJ_T0036477.1 MGP_LPJ_G0020284.1 mouse_genomes_project 13 22598016 22610373 + MGP_LPJ_P0036477 BC005537 protein_coding protein_coding MGP_LPJ_T0036478.1 MGP_LPJ_G0020284.1 mouse_genomes_project 13 22598379 22609020 + MGP_LPJ_P0036478 BC005537 protein_coding protein_coding MGP_LPJ_T0037252.1 MGP_LPJ_G0020562.1 mouse_genomes_project 13 60962466 60967177 - MGP_LPJ_P0037252 Ctla2a protein_coding protein_coding MGP_LPJ_T0006542.1 MGP_LPJ_G0005435.1 mouse_genomes_project 13 27083348 27085613 + A330102I10Rik lincRNA lincRNA MGP_LPJ_T0006543.1 MGP_LPJ_G0005435.1 mouse_genomes_project 13 27083421 27098715 + A330102I10Rik lincRNA lincRNA MGP_LPJ_T0006544.1 MGP_LPJ_G0005435.1 mouse_genomes_project 13 27086240 27098783 + A330102I10Rik lincRNA lincRNA MGP_LPJ_T0006545.1 MGP_LPJ_G0005435.1 mouse_genomes_project 13 27086655 27109834 + A330102I10Rik lincRNA lincRNA MGP_LPJ_T0012896.1 MGP_LPJ_G0010987.1 mouse_genomes_project 13 26889049 26890833 + processed_pseudogene processed_pseudogene MGP_LPJ_T0036953.1 MGP_LPJ_G0020475.1 mouse_genomes_project 13 54036746 54050056 + MGP_LPJ_P0036953 Cplx2 protein_coding protein_coding MGP_LPJ_T0101266.1 MGP_LPJ_G0039503.1 mouse_genomes_project 13 105254617 105258893 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0037782.1 MGP_LPJ_G0020756.1 mouse_genomes_project 13 98337333 98360254 - MGP_LPJ_P0037782 Hmgcr protein_coding protein_coding MGP_LPJ_T0037783.1 MGP_LPJ_G0020756.1 mouse_genomes_project 13 98338644 98355993 - MGP_LPJ_P0037783 Hmgcr protein_coding nonsense_mediated_decay MGP_LPJ_T0037784.1 MGP_LPJ_G0020756.1 mouse_genomes_project 13 98338811 98341155 - MGP_LPJ_P0037784 Hmgcr protein_coding protein_coding MGP_LPJ_T0037785.1 MGP_LPJ_G0020756.1 mouse_genomes_project 13 98339717 98355940 - MGP_LPJ_P0037785 Hmgcr protein_coding protein_coding MGP_LPJ_T0037786.1 MGP_LPJ_G0020756.1 mouse_genomes_project 13 98340484 98345707 - MGP_LPJ_P0037786 Hmgcr protein_coding protein_coding MGP_LPJ_T0037787.1 MGP_LPJ_G0020756.1 mouse_genomes_project 13 98348123 98360193 - Hmgcr protein_coding retained_intron MGP_LPJ_T0037788.1 MGP_LPJ_G0020756.1 mouse_genomes_project 13 98349389 98360141 - MGP_LPJ_P0037788 Hmgcr protein_coding protein_coding MGP_LPJ_T0037789.1 MGP_LPJ_G0020756.1 mouse_genomes_project 13 98354935 98355817 - Hmgcr protein_coding retained_intron MGP_LPJ_T0037790.1 MGP_LPJ_G0020756.1 mouse_genomes_project 13 98355345 98358878 - MGP_LPJ_P0037790 Hmgcr protein_coding protein_coding MGP_LPJ_T0037791.1 MGP_LPJ_G0020756.1 mouse_genomes_project 13 98355350 98359786 - MGP_LPJ_P0037791 Hmgcr protein_coding protein_coding MGP_LPJ_T0037792.1 MGP_LPJ_G0020756.1 mouse_genomes_project 13 98355548 98360166 - Hmgcr protein_coding retained_intron MGP_LPJ_T0042312.1 MGP_LPJ_G0022213.1 mouse_genomes_project 15 100724397 100744665 - MGP_LPJ_P0042312 Prkag1 protein_coding protein_coding MGP_LPJ_T0099097.1 MGP_LPJ_G0037360.1 mouse_genomes_project 15 448984 449110 - Gm22031 snRNA snRNA MGP_LPJ_T0040278.1 MGP_LPJ_G0021583.1 mouse_genomes_project 15 104029 111299 + MGP_LPJ_P0040278 protein_coding protein_coding MGP_LPJ_T0040279.1 MGP_LPJ_G0021583.1 mouse_genomes_project 15 106262 116093 + MGP_LPJ_P0040279 protein_coding protein_coding MGP_LPJ_T0040280.1 MGP_LPJ_G0021583.1 mouse_genomes_project 15 106306 111252 + MGP_LPJ_P0040280 protein_coding protein_coding MGP_LPJ_T0040281.1 MGP_LPJ_G0021583.1 mouse_genomes_project 15 106416 116092 + MGP_LPJ_P0040281 protein_coding protein_coding MGP_LPJ_T0040282.1 MGP_LPJ_G0021583.1 mouse_genomes_project 15 106493 111181 + MGP_LPJ_P0040282 protein_coding protein_coding MGP_LPJ_T0040283.1 MGP_LPJ_G0021583.1 mouse_genomes_project 15 106494 110639 + protein_coding retained_intron MGP_LPJ_T0040284.1 MGP_LPJ_G0021583.1 mouse_genomes_project 15 107601 112788 + MGP_LPJ_P0040284 protein_coding protein_coding MGP_LPJ_T0100386.1 MGP_LPJ_G0038649.1 mouse_genomes_project 15 42742359 42742491 + Gm25093 snoRNA snoRNA MGP_LPJ_T0101273.1 MGP_LPJ_G0039507.1 mouse_genomes_project 15 31618129 31620117 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101274.1 MGP_LPJ_G0039507.1 mouse_genomes_project 15 31619343 31620080 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0041137.1 MGP_LPJ_G0021870.1 mouse_genomes_project 15 76098061 76107301 + Zfp707 protein_coding retained_intron MGP_LPJ_T0041138.1 MGP_LPJ_G0021870.1 mouse_genomes_project 15 76098200 76107189 + MGP_LPJ_P0041138 Zfp707 protein_coding protein_coding MGP_LPJ_T0041139.1 MGP_LPJ_G0021870.1 mouse_genomes_project 15 76098210 76107177 + MGP_LPJ_P0041139 Zfp707 protein_coding protein_coding MGP_LPJ_T0041140.1 MGP_LPJ_G0021870.1 mouse_genomes_project 15 76098579 76106198 + MGP_LPJ_P0041140 Zfp707 protein_coding protein_coding MGP_LPJ_T0041141.1 MGP_LPJ_G0021870.1 mouse_genomes_project 15 76104215 76105383 + Zfp707 protein_coding retained_intron MGP_LPJ_T0041677.1 MGP_LPJ_G0022014.1 mouse_genomes_project 15 82086692 82088180 - MGP_LPJ_P0041677 Gm5218 protein_coding protein_coding MGP_LPJ_T0017405.1 MGP_LPJ_G0015215.1 mouse_genomes_project 15 67823144 67825861 - Gm26621 processed_transcript TEC MGP_LPJ_T0017406.1 MGP_LPJ_G0015215.1 mouse_genomes_project 15 67823565 67825841 - Gm26621 processed_transcript processed_transcript MGP_LPJ_T0042001.1 MGP_LPJ_G0022118.1 mouse_genomes_project 15 90456573 90461933 - Hdac10 protein_coding processed_transcript MGP_LPJ_T0042002.1 MGP_LPJ_G0022118.1 mouse_genomes_project 15 90456573 90461980 - MGP_LPJ_P0042002 Hdac10 protein_coding protein_coding MGP_LPJ_T0042003.1 MGP_LPJ_G0022118.1 mouse_genomes_project 15 90456575 90461941 - Hdac10 protein_coding retained_intron MGP_LPJ_T0042004.1 MGP_LPJ_G0022118.1 mouse_genomes_project 15 90456575 90461931 - Hdac10 protein_coding retained_intron MGP_LPJ_T0042005.1 MGP_LPJ_G0022118.1 mouse_genomes_project 15 90456577 90461959 - Hdac10 protein_coding retained_intron MGP_LPJ_T0042006.1 MGP_LPJ_G0022118.1 mouse_genomes_project 15 90456838 90461728 - MGP_LPJ_P0042006 Hdac10 protein_coding protein_coding MGP_LPJ_T0042007.1 MGP_LPJ_G0022118.1 mouse_genomes_project 15 90456940 90458965 - Hdac10 protein_coding processed_transcript MGP_LPJ_T0042008.1 MGP_LPJ_G0022118.1 mouse_genomes_project 15 90459258 90460770 - Hdac10 protein_coding processed_transcript MGP_LPJ_T0041042.1 MGP_LPJ_G0021838.1 mouse_genomes_project 15 74589672 74594863 - MGP_LPJ_P0041042 Lynx1 protein_coding protein_coding MGP_LPJ_T0041043.1 MGP_LPJ_G0021838.1 mouse_genomes_project 15 74593415 74594831 - MGP_LPJ_P0041043 Lynx1 protein_coding protein_coding MGP_LPJ_T0041044.1 MGP_LPJ_G0021838.1 mouse_genomes_project 15 74594135 74594841 - Lynx1 protein_coding retained_intron MGP_LPJ_T0040350.1 MGP_LPJ_G0021603.1 mouse_genomes_project 15 3607698 3707816 + MGP_LPJ_P0040350 Rictor protein_coding protein_coding MGP_LPJ_T0040434.1 MGP_LPJ_G0021625.1 mouse_genomes_project 15 7481197 7506414 - MGP_LPJ_P0040434 Dnajc21 protein_coding protein_coding MGP_LPJ_T0040435.1 MGP_LPJ_G0021625.1 mouse_genomes_project 15 7481206 7497621 - MGP_LPJ_P0040435 Dnajc21 protein_coding protein_coding MGP_LPJ_T0040436.1 MGP_LPJ_G0021625.1 mouse_genomes_project 15 7481207 7484589 - Dnajc21 protein_coding retained_intron MGP_LPJ_T0040437.1 MGP_LPJ_G0021625.1 mouse_genomes_project 15 7482137 7486511 - Dnajc21 protein_coding retained_intron MGP_LPJ_T0040438.1 MGP_LPJ_G0021625.1 mouse_genomes_project 15 7487952 7498142 - Dnajc21 protein_coding retained_intron MGP_LPJ_T0040986.1 MGP_LPJ_G0021821.1 mouse_genomes_project 15 72831893 72924931 - MGP_LPJ_P0040986 Ago2 protein_coding protein_coding MGP_LPJ_T0041795.1 MGP_LPJ_G0022056.1 mouse_genomes_project 15 83811575 83841406 - MGP_LPJ_P0041795 Nfam1 protein_coding protein_coding MGP_LPJ_T0041796.1 MGP_LPJ_G0022056.1 mouse_genomes_project 15 83813590 83851641 - MGP_LPJ_P0041796 Nfam1 protein_coding protein_coding MGP_LPJ_T0041968.1 MGP_LPJ_G0022111.1 mouse_genomes_project 15 90219967 90286667 - MGP_LPJ_P0041968 Ttll8 protein_coding nonsense_mediated_decay MGP_LPJ_T0041969.1 MGP_LPJ_G0022111.1 mouse_genomes_project 15 90244171 90286659 - MGP_LPJ_P0041969 Ttll8 protein_coding protein_coding MGP_LPJ_T0041970.1 MGP_LPJ_G0022111.1 mouse_genomes_project 15 90244227 90286308 - MGP_LPJ_P0041970 Ttll8 protein_coding nonsense_mediated_decay MGP_LPJ_T0041971.1 MGP_LPJ_G0022111.1 mouse_genomes_project 15 90245942 90250142 - Ttll8 protein_coding retained_intron MGP_LPJ_T0041085.1 MGP_LPJ_G0021853.1 mouse_genomes_project 15 75443571 75443801 - MGP_LPJ_P0041085 protein_coding protein_coding MGP_LPJ_T0041446.1 MGP_LPJ_G0021955.1 mouse_genomes_project 15 79307605 79324871 + MGP_LPJ_P0041446 Gga1 protein_coding protein_coding MGP_LPJ_T0100394.1 MGP_LPJ_G0038657.1 mouse_genomes_project 15 60559739 60559873 - Gm24696 snoRNA snoRNA MGP_LPJ_T0041640.1 MGP_LPJ_G0022005.1 mouse_genomes_project 15 81534950 81565936 + MGP_LPJ_P0041640 Sgsm3 protein_coding nonsense_mediated_decay MGP_LPJ_T0041641.1 MGP_LPJ_G0022005.1 mouse_genomes_project 15 81534970 81571706 + Sgsm3 protein_coding processed_transcript MGP_LPJ_T0041642.1 MGP_LPJ_G0022005.1 mouse_genomes_project 15 81534971 81571498 + MGP_LPJ_P0041642 Sgsm3 protein_coding protein_coding MGP_LPJ_T0041643.1 MGP_LPJ_G0022005.1 mouse_genomes_project 15 81534991 81563059 + Sgsm3 protein_coding processed_transcript MGP_LPJ_T0041644.1 MGP_LPJ_G0022005.1 mouse_genomes_project 15 81534991 81565918 + MGP_LPJ_P0041644 Sgsm3 protein_coding protein_coding MGP_LPJ_T0041645.1 MGP_LPJ_G0022005.1 mouse_genomes_project 15 81535008 81563059 + Sgsm3 protein_coding processed_transcript MGP_LPJ_T0041647.1 MGP_LPJ_G0022005.1 mouse_genomes_project 15 81567358 81569367 + Sgsm3 protein_coding retained_intron MGP_LPJ_T0041648.1 MGP_LPJ_G0022005.1 mouse_genomes_project 15 81567779 81569953 + MGP_LPJ_P0041648 Sgsm3 protein_coding protein_coding MGP_LPJ_T0041649.1 MGP_LPJ_G0022005.1 mouse_genomes_project 15 81568670 81569716 + Sgsm3 protein_coding retained_intron MGP_LPJ_T0041650.1 MGP_LPJ_G0022005.1 mouse_genomes_project 15 81569274 81571306 + Sgsm3 protein_coding retained_intron MGP_LPJ_T0041651.1 MGP_LPJ_G0022005.1 mouse_genomes_project 15 81570051 81571173 + Sgsm3 protein_coding retained_intron MGP_LPJ_T0041652.1 MGP_LPJ_G0022005.1 mouse_genomes_project 15 81570141 81571158 + Sgsm3 protein_coding retained_intron MGP_LPJ_T0041653.1 MGP_LPJ_G0022005.1 mouse_genomes_project 15 81570293 81571052 + Sgsm3 protein_coding retained_intron MGP_LPJ_T0040339.1 MGP_LPJ_G0021601.1 mouse_genomes_project 15 3346097 3401937 + MGP_LPJ_P0040339 C9 protein_coding protein_coding MGP_LPJ_T0040340.1 MGP_LPJ_G0021601.1 mouse_genomes_project 15 3346142 3370129 + MGP_LPJ_P0040340 C9 protein_coding nonsense_mediated_decay MGP_LPJ_T0040341.1 MGP_LPJ_G0021601.1 mouse_genomes_project 15 3392450 3394393 + C9 protein_coding retained_intron MGP_LPJ_T0040342.1 MGP_LPJ_G0021601.1 mouse_genomes_project 15 3392888 3401930 + MGP_LPJ_P0040342 C9 protein_coding protein_coding MGP_LPJ_T0041414.1 MGP_LPJ_G0021941.1 mouse_genomes_project 15 78799284 78805566 - MGP_LPJ_P0041414 Tst protein_coding protein_coding MGP_LPJ_T0041579.1 MGP_LPJ_G0021989.1 mouse_genomes_project 15 80374257 80387267 + MGP_LPJ_P0041579 Apobec3 protein_coding protein_coding MGP_LPJ_T0041580.1 MGP_LPJ_G0021989.1 mouse_genomes_project 15 80374292 80387320 + MGP_LPJ_P0041580 Apobec3 protein_coding protein_coding MGP_LPJ_T0041581.1 MGP_LPJ_G0021989.1 mouse_genomes_project 15 80374647 80379517 + Apobec3 protein_coding processed_transcript MGP_LPJ_T0041582.1 MGP_LPJ_G0021989.1 mouse_genomes_project 15 80375004 80390154 + MGP_LPJ_P0041582 Apobec3 protein_coding protein_coding MGP_LPJ_T0041583.1 MGP_LPJ_G0021989.1 mouse_genomes_project 15 80375007 80387212 + MGP_LPJ_P0041583 Apobec3 protein_coding nonsense_mediated_decay MGP_LPJ_T0041584.1 MGP_LPJ_G0021989.1 mouse_genomes_project 15 80375038 80389093 + MGP_LPJ_P0041584 Apobec3 protein_coding nonsense_mediated_decay MGP_LPJ_T0041585.1 MGP_LPJ_G0021989.1 mouse_genomes_project 15 80375044 80389813 + MGP_LPJ_P0041585 Apobec3 protein_coding protein_coding MGP_LPJ_T0041586.1 MGP_LPJ_G0021989.1 mouse_genomes_project 15 80375045 80390161 + MGP_LPJ_P0041586 Apobec3 protein_coding protein_coding MGP_LPJ_T0041587.1 MGP_LPJ_G0021989.1 mouse_genomes_project 15 80375051 80398383 + MGP_LPJ_P0041587 Apobec3 protein_coding nonsense_mediated_decay MGP_LPJ_T0041588.1 MGP_LPJ_G0021989.1 mouse_genomes_project 15 80375080 80389093 + MGP_LPJ_P0041588 Apobec3 protein_coding protein_coding MGP_LPJ_T0041589.1 MGP_LPJ_G0021989.1 mouse_genomes_project 15 80377652 80379938 + MGP_LPJ_P0041589 Apobec3 protein_coding protein_coding MGP_LPJ_T0041590.1 MGP_LPJ_G0021989.1 mouse_genomes_project 15 80379575 80387630 + Apobec3 protein_coding retained_intron MGP_LPJ_T0041591.1 MGP_LPJ_G0021989.1 mouse_genomes_project 15 80381973 80389648 + Apobec3 protein_coding retained_intron MGP_LPJ_T0041592.1 MGP_LPJ_G0021989.1 mouse_genomes_project 15 80387834 80388801 + Apobec3 protein_coding retained_intron MGP_LPJ_T0100367.1 MGP_LPJ_G0038630.1 mouse_genomes_project 15 13189165 13189293 + Gm25550 snoRNA snoRNA MGP_LPJ_T0041099.1 MGP_LPJ_G0021857.1 mouse_genomes_project 15 75733122 75741734 + MGP_LPJ_P0041099 Zfp41 protein_coding protein_coding MGP_LPJ_T0041100.1 MGP_LPJ_G0021857.1 mouse_genomes_project 15 75733127 75741727 + MGP_LPJ_P0041100 Zfp41 protein_coding protein_coding MGP_LPJ_T0041101.1 MGP_LPJ_G0021857.1 mouse_genomes_project 15 75733169 75735088 + MGP_LPJ_P0041101 Zfp41 protein_coding protein_coding MGP_LPJ_T0041102.1 MGP_LPJ_G0021857.1 mouse_genomes_project 15 75738154 75740264 + Zfp41 protein_coding processed_transcript MGP_LPJ_T0101895.1 MGP_LPJ_G0039932.1 mouse_genomes_project 15 75294265 75294477 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0003633.1 MGP_LPJ_G0003293.1 mouse_genomes_project 15 87181877 87184790 - Gm15722 antisense antisense MGP_LPJ_T0040305.1 MGP_LPJ_G0021590.1 mouse_genomes_project 15 1552339 1622452 + MGP_LPJ_P0040305 C6 protein_coding protein_coding MGP_LPJ_T0040306.1 MGP_LPJ_G0021590.1 mouse_genomes_project 15 1552380 1583496 + MGP_LPJ_P0040306 C6 protein_coding protein_coding MGP_LPJ_T0040307.1 MGP_LPJ_G0021590.1 mouse_genomes_project 15 1552380 1622049 + MGP_LPJ_P0040307 C6 protein_coding protein_coding MGP_LPJ_T0040308.1 MGP_LPJ_G0021590.1 mouse_genomes_project 15 1552448 1633583 + MGP_LPJ_P0040308 C6 protein_coding protein_coding MGP_LPJ_T0040309.1 MGP_LPJ_G0021590.1 mouse_genomes_project 15 1567068 1610099 + MGP_LPJ_P0040309 C6 protein_coding unknown_likely_coding MGP_LPJ_T0040310.1 MGP_LPJ_G0021590.1 mouse_genomes_project 15 1588936 1610006 + C6 protein_coding processed_transcript MGP_LPJ_T0040311.1 MGP_LPJ_G0021590.1 mouse_genomes_project 15 1611687 1627144 + MGP_LPJ_P0040311 C6 protein_coding unknown_likely_coding MGP_LPJ_T0040317.1 MGP_LPJ_G0021596.1 mouse_genomes_project 15 1957894 1958465 - MGP_LPJ_P0040317 Gm10250 protein_coding protein_coding MGP_LPJ_T0006801.1 MGP_LPJ_G0005613.1 mouse_genomes_project 15 82412710 82414531 - Gm17597 lincRNA lincRNA MGP_LPJ_T0011408.1 MGP_LPJ_G0009526.1 mouse_genomes_project 15 76423925 76424210 - Mirt2 misc_RNA misc_RNA MGP_LPJ_T0041168.1 MGP_LPJ_G0021879.1 mouse_genomes_project 15 76322379 76352043 - MGP_LPJ_P0041168 Plec protein_coding protein_coding MGP_LPJ_T0041169.1 MGP_LPJ_G0021879.1 mouse_genomes_project 15 76322384 76385692 - MGP_LPJ_P0041169 Plec protein_coding protein_coding MGP_LPJ_T0041170.1 MGP_LPJ_G0021879.1 mouse_genomes_project 15 76322384 76358704 - MGP_LPJ_P0041170 Plec protein_coding protein_coding MGP_LPJ_T0041171.1 MGP_LPJ_G0021879.1 mouse_genomes_project 15 76322384 76361548 - MGP_LPJ_P0041171 Plec protein_coding protein_coding MGP_LPJ_T0041172.1 MGP_LPJ_G0021879.1 mouse_genomes_project 15 76322384 76352218 - MGP_LPJ_P0041172 Plec protein_coding protein_coding MGP_LPJ_T0041173.1 MGP_LPJ_G0021879.1 mouse_genomes_project 15 76322385 76383811 - MGP_LPJ_P0041173 Plec protein_coding protein_coding MGP_LPJ_T0041174.1 MGP_LPJ_G0021879.1 mouse_genomes_project 15 76322386 76350592 - MGP_LPJ_P0041174 Plec protein_coding protein_coding MGP_LPJ_T0041175.1 MGP_LPJ_G0021879.1 mouse_genomes_project 15 76322386 76352218 - MGP_LPJ_P0041175 Plec protein_coding protein_coding MGP_LPJ_T0041176.1 MGP_LPJ_G0021879.1 mouse_genomes_project 15 76322386 76358705 - MGP_LPJ_P0041176 Plec protein_coding protein_coding MGP_LPJ_T0041177.1 MGP_LPJ_G0021879.1 mouse_genomes_project 15 76322386 76352990 - MGP_LPJ_P0041177 Plec protein_coding protein_coding MGP_LPJ_T0041178.1 MGP_LPJ_G0021879.1 mouse_genomes_project 15 76322386 76348093 - MGP_LPJ_P0041178 Plec protein_coding protein_coding MGP_LPJ_T0041179.1 MGP_LPJ_G0021879.1 mouse_genomes_project 15 76326790 76340426 - MGP_LPJ_P0041179 Plec protein_coding protein_coding MGP_LPJ_T0041180.1 MGP_LPJ_G0021879.1 mouse_genomes_project 15 76338993 76358704 - MGP_LPJ_P0041180 Plec protein_coding protein_coding MGP_LPJ_T0041181.1 MGP_LPJ_G0021879.1 mouse_genomes_project 15 76340846 76386359 - MGP_LPJ_P0041181 Plec protein_coding protein_coding MGP_LPJ_T0041182.1 MGP_LPJ_G0021879.1 mouse_genomes_project 15 76340846 76360636 - MGP_LPJ_P0041182 Plec protein_coding protein_coding MGP_LPJ_T0041183.1 MGP_LPJ_G0021879.1 mouse_genomes_project 15 76340846 76352218 - MGP_LPJ_P0041183 Plec protein_coding protein_coding MGP_LPJ_T0041184.1 MGP_LPJ_G0021879.1 mouse_genomes_project 15 76340923 76386884 - MGP_LPJ_P0041184 Plec protein_coding protein_coding MGP_LPJ_T0041185.1 MGP_LPJ_G0021879.1 mouse_genomes_project 15 76346775 76361548 - MGP_LPJ_P0041185 Plec protein_coding protein_coding MGP_LPJ_T0041186.1 MGP_LPJ_G0021879.1 mouse_genomes_project 15 76346775 76352990 - MGP_LPJ_P0041186 Plec protein_coding protein_coding MGP_LPJ_T0041187.1 MGP_LPJ_G0021879.1 mouse_genomes_project 15 76385048 76386888 - Plec protein_coding retained_intron MGP_LPJ_T0011397.1 MGP_LPJ_G0009515.1 mouse_genomes_project 15 3403878 3404154 + Gm23218 misc_RNA misc_RNA MGP_LPJ_T0013051.1 MGP_LPJ_G0011142.1 mouse_genomes_project 15 10663274 10664057 + processed_pseudogene processed_pseudogene MGP_LPJ_T0041081.1 MGP_LPJ_G0021851.1 mouse_genomes_project 15 75150794 75153184 + protein_coding retained_intron MGP_LPJ_T0006824.1 MGP_LPJ_G0005627.1 mouse_genomes_project 15 102594726 102603423 - 5330439K02Rik lincRNA lincRNA MGP_LPJ_T0099128.1 MGP_LPJ_G0037391.1 mouse_genomes_project 15 73510268 73510395 + Gm22106 snRNA snRNA MGP_LPJ_T0041771.1 MGP_LPJ_G0022041.1 mouse_genomes_project 15 82991925 83002424 - MGP_LPJ_P0041771 Naga protein_coding protein_coding MGP_LPJ_T0040510.1 MGP_LPJ_G0021650.1 mouse_genomes_project 15 20255497 21123828 + MGP_LPJ_P0040510 Cdh18 protein_coding protein_coding MGP_LPJ_T0040511.1 MGP_LPJ_G0021650.1 mouse_genomes_project 15 20757268 20903080 + Cdh18 protein_coding retained_intron MGP_LPJ_T0040512.1 MGP_LPJ_G0021650.1 mouse_genomes_project 15 20757276 21172776 + Cdh18 protein_coding retained_intron MGP_LPJ_T0040513.1 MGP_LPJ_G0021650.1 mouse_genomes_project 15 20757276 21207651 + MGP_LPJ_P0040513 Cdh18 protein_coding protein_coding MGP_LPJ_T0040514.1 MGP_LPJ_G0021650.1 mouse_genomes_project 15 20901640 21207298 + MGP_LPJ_P0040514 Cdh18 protein_coding protein_coding MGP_LPJ_T0040515.1 MGP_LPJ_G0021650.1 mouse_genomes_project 15 20901802 21207262 + MGP_LPJ_P0040515 Cdh18 protein_coding protein_coding MGP_LPJ_T0041353.1 MGP_LPJ_G0021918.1 mouse_genomes_project 15 77101979 77104227 + MGP_LPJ_P0041353 Rpl8 protein_coding protein_coding MGP_LPJ_T0013100.1 MGP_LPJ_G0011191.1 mouse_genomes_project 15 101205035 101212374 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010113.1 MGP_LPJ_G0008231.1 mouse_genomes_project 15 104174362 104174473 + Gm44356 miRNA miRNA MGP_LPJ_T0006783.1 MGP_LPJ_G0005604.1 mouse_genomes_project 15 53806120 53824006 + Gm26684 lincRNA lincRNA MGP_LPJ_T0003645.1 MGP_LPJ_G0003303.1 mouse_genomes_project 15 101794429 101810528 + Gm17058 antisense antisense MGP_LPJ_T0040540.1 MGP_LPJ_G0021659.1 mouse_genomes_project 15 25397086 25531360 + MGP_LPJ_P0040540 Ank protein_coding protein_coding MGP_LPJ_T0040541.1 MGP_LPJ_G0021659.1 mouse_genomes_project 15 25507886 25529614 + Ank protein_coding retained_intron MGP_LPJ_T0042498.1 MGP_LPJ_G0022267.1 mouse_genomes_project 15 103294900 103299166 + MGP_LPJ_P0042498 Ankrd33 protein_coding protein_coding MGP_LPJ_T0017424.1 MGP_LPJ_G0015226.1 mouse_genomes_project 15 101213677 101225613 + 1700120C14Rik processed_transcript antisense MGP_LPJ_T0017425.1 MGP_LPJ_G0015226.1 mouse_genomes_project 15 101213725 101224191 + 1700120C14Rik processed_transcript antisense MGP_LPJ_T0017426.1 MGP_LPJ_G0015226.1 mouse_genomes_project 15 101213727 101215721 + 1700120C14Rik processed_transcript retained_intron MGP_LPJ_T0011410.1 MGP_LPJ_G0009528.1 mouse_genomes_project 15 87248137 87248435 + Gm24011 misc_RNA misc_RNA MGP_LPJ_T0041469.1 MGP_LPJ_G0021961.1 mouse_genomes_project 15 79469859 79480491 + MGP_LPJ_P0041469 Gcat protein_coding protein_coding MGP_LPJ_T0041470.1 MGP_LPJ_G0021961.1 mouse_genomes_project 15 79469859 79484664 + MGP_LPJ_P0041470 Gcat protein_coding protein_coding MGP_LPJ_T0041471.1 MGP_LPJ_G0021961.1 mouse_genomes_project 15 79484017 79485691 + MGP_LPJ_P0041471 Gcat protein_coding protein_coding MGP_LPJ_T0006830.1 MGP_LPJ_G0005632.1 mouse_genomes_project 15 104818741 104821928 - lincRNA lincRNA MGP_LPJ_T0013056.1 MGP_LPJ_G0011147.1 mouse_genomes_project 15 23541499 23541827 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011404.1 MGP_LPJ_G0009522.1 mouse_genomes_project 15 61269604 61269777 + Gm27913 misc_RNA misc_RNA MGP_LPJ_T0042656.1 MGP_LPJ_G0022325.1 mouse_genomes_project 15 105057291 105072692 - MGP_LPJ_P0042656 Calcoco1 protein_coding protein_coding MGP_LPJ_T0042657.1 MGP_LPJ_G0022325.1 mouse_genomes_project 15 105057484 105060415 - MGP_LPJ_P0042657 Calcoco1 protein_coding protein_coding MGP_LPJ_T0042658.1 MGP_LPJ_G0022325.1 mouse_genomes_project 15 105058097 105072645 - MGP_LPJ_P0042658 Calcoco1 protein_coding protein_coding MGP_LPJ_T0042659.1 MGP_LPJ_G0022325.1 mouse_genomes_project 15 105060738 105066310 - Calcoco1 protein_coding retained_intron MGP_LPJ_T0010059.1 MGP_LPJ_G0008177.1 mouse_genomes_project 15 61909505 61909575 - Gm24810 miRNA miRNA MGP_LPJ_T0013070.1 MGP_LPJ_G0011161.1 mouse_genomes_project 15 46177281 46180835 - processed_pseudogene processed_pseudogene MGP_LPJ_T0042616.1 MGP_LPJ_G0022319.1 mouse_genomes_project 15 104843298 104843463 + MGP_LPJ_P0042616 Gm10337 protein_coding protein_coding MGP_LPJ_T0100383.1 MGP_LPJ_G0038646.1 mouse_genomes_project 15 37324875 37325006 + Gm24789 snoRNA snoRNA MGP_LPJ_T0041676.1 MGP_LPJ_G0022013.1 mouse_genomes_project 15 82050705 82061723 + MGP_LPJ_P0041676 Rbx1 protein_coding protein_coding MGP_LPJ_T0040847.1 MGP_LPJ_G0021775.1 mouse_genomes_project 15 57330473 57341351 - MGP_LPJ_P0040847 Klhl38 protein_coding protein_coding MGP_LPJ_T0017411.1 MGP_LPJ_G0015219.1 mouse_genomes_project 15 79764634 79765998 + Gm20420 processed_transcript processed_transcript MGP_LPJ_T0041654.1 MGP_LPJ_G0022007.1 mouse_genomes_project 15 81571707 81668946 - MGP_LPJ_P0041654 Mkl1 protein_coding protein_coding MGP_LPJ_T0041655.1 MGP_LPJ_G0022007.1 mouse_genomes_project 15 81572701 81689041 - MGP_LPJ_P0041655 Mkl1 protein_coding protein_coding MGP_LPJ_T0041656.1 MGP_LPJ_G0022007.1 mouse_genomes_project 15 81575270 81606140 - MGP_LPJ_P0041656 Mkl1 protein_coding protein_coding MGP_LPJ_T0041657.1 MGP_LPJ_G0022007.1 mouse_genomes_project 15 81576179 81577605 - Mkl1 protein_coding retained_intron MGP_LPJ_T0041658.1 MGP_LPJ_G0022007.1 mouse_genomes_project 15 81579654 81580719 - Mkl1 protein_coding retained_intron MGP_LPJ_T0041659.1 MGP_LPJ_G0022007.1 mouse_genomes_project 15 81581905 81583384 - Mkl1 protein_coding retained_intron MGP_LPJ_T0041660.1 MGP_LPJ_G0022007.1 mouse_genomes_project 15 81587108 81755721 - Mkl1 protein_coding retained_intron MGP_LPJ_T0041661.1 MGP_LPJ_G0022007.1 mouse_genomes_project 15 81605726 81755515 - Mkl1 protein_coding retained_intron MGP_LPJ_T0099103.1 MGP_LPJ_G0037366.1 mouse_genomes_project 15 21405567 21405725 - Gm23980 snRNA snRNA MGP_LPJ_T0041914.1 MGP_LPJ_G0022093.1 mouse_genomes_project 15 86582699 86626311 - MGP_LPJ_P0041914 Wnt7b protein_coding protein_coding MGP_LPJ_T0041915.1 MGP_LPJ_G0022093.1 mouse_genomes_project 15 86582703 86630547 - MGP_LPJ_P0041915 Wnt7b protein_coding protein_coding MGP_LPJ_T0040430.1 MGP_LPJ_G0021624.1 mouse_genomes_project 15 7386973 7403962 + MGP_LPJ_P0040430 Agxt2 protein_coding protein_coding MGP_LPJ_T0040431.1 MGP_LPJ_G0021624.1 mouse_genomes_project 15 7386978 7439837 + MGP_LPJ_P0040431 Agxt2 protein_coding protein_coding MGP_LPJ_T0040432.1 MGP_LPJ_G0021624.1 mouse_genomes_project 15 7386978 7411708 + MGP_LPJ_P0040432 Agxt2 protein_coding protein_coding MGP_LPJ_T0040433.1 MGP_LPJ_G0021624.1 mouse_genomes_project 15 7387020 7439422 + MGP_LPJ_P0040433 Agxt2 protein_coding protein_coding MGP_LPJ_T0101491.1 MGP_LPJ_G0039632.1 mouse_genomes_project 15 63119169 63218510 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101492.1 MGP_LPJ_G0039632.1 mouse_genomes_project 15 63173669 63175655 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101493.1 MGP_LPJ_G0039633.1 mouse_genomes_project 15 63208479 63213018 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0010077.1 MGP_LPJ_G0008195.1 mouse_genomes_project 15 80577128 80577236 - Snord43 miRNA miRNA MGP_LPJ_T0041445.1 MGP_LPJ_G0021954.1 mouse_genomes_project 15 79279016 79285884 - MGP_LPJ_P0041445 Lgals2 protein_coding protein_coding MGP_LPJ_T0042432.1 MGP_LPJ_G0022253.1 mouse_genomes_project 15 102520388 102556591 - MGP_LPJ_P0042432 Slc11a2 protein_coding protein_coding MGP_LPJ_T0042433.1 MGP_LPJ_G0022253.1 mouse_genomes_project 15 102524903 102556538 - MGP_LPJ_P0042433 Slc11a2 protein_coding protein_coding MGP_LPJ_T0042434.1 MGP_LPJ_G0022253.1 mouse_genomes_project 15 102527578 102556648 - MGP_LPJ_P0042434 Slc11a2 protein_coding unknown_likely_coding MGP_LPJ_T0042435.1 MGP_LPJ_G0022253.1 mouse_genomes_project 15 102529984 102535595 - MGP_LPJ_P0042435 Slc11a2 protein_coding protein_coding MGP_LPJ_T0042436.1 MGP_LPJ_G0022253.1 mouse_genomes_project 15 102530172 102535774 - Slc11a2 protein_coding retained_intron MGP_LPJ_T0042437.1 MGP_LPJ_G0022253.1 mouse_genomes_project 15 102538756 102558607 - MGP_LPJ_P0042437 Slc11a2 protein_coding protein_coding MGP_LPJ_T0042438.1 MGP_LPJ_G0022253.1 mouse_genomes_project 15 102540621 102556505 - MGP_LPJ_P0042438 Slc11a2 protein_coding nonsense_mediated_decay MGP_LPJ_T0042439.1 MGP_LPJ_G0022253.1 mouse_genomes_project 15 102541755 102557749 - MGP_LPJ_P0042439 Slc11a2 protein_coding protein_coding MGP_LPJ_T0042440.1 MGP_LPJ_G0022253.1 mouse_genomes_project 15 102542601 102557627 - MGP_LPJ_P0042440 Slc11a2 protein_coding protein_coding MGP_LPJ_T0099131.1 MGP_LPJ_G0037394.1 mouse_genomes_project 15 77274164 77274271 + Gm24753 snRNA snRNA MGP_LPJ_T0010075.1 MGP_LPJ_G0008193.1 mouse_genomes_project 15 80068745 80068866 - Gm27903 miRNA miRNA MGP_LPJ_T0010086.1 MGP_LPJ_G0008204.1 mouse_genomes_project 15 83236916 83236976 + Gm28023 miRNA miRNA MGP_LPJ_T0042543.1 MGP_LPJ_G0022295.1 mouse_genomes_project 15 104217172 104228132 - MGP_LPJ_P0042543 Krt79 protein_coding protein_coding MGP_LPJ_T0042610.1 MGP_LPJ_G0022317.1 mouse_genomes_project 15 104808678 104839636 + MGP_LPJ_P0042610 Pcbp2 protein_coding protein_coding MGP_LPJ_T0042611.1 MGP_LPJ_G0022317.1 mouse_genomes_project 15 104808678 104839636 + MGP_LPJ_P0042611 Pcbp2 protein_coding protein_coding MGP_LPJ_T0042612.1 MGP_LPJ_G0022317.1 mouse_genomes_project 15 104808678 104839636 + MGP_LPJ_P0042612 Pcbp2 protein_coding protein_coding MGP_LPJ_T0042466.1 MGP_LPJ_G0022262.1 mouse_genomes_project 15 102812835 102828753 - MGP_LPJ_P0042466 Cela1 protein_coding protein_coding MGP_LPJ_T0041607.1 MGP_LPJ_G0021993.1 mouse_genomes_project 15 80587019 80609935 + MGP_LPJ_P0041607 Syngr1 protein_coding protein_coding MGP_LPJ_T0041608.1 MGP_LPJ_G0021993.1 mouse_genomes_project 15 80587029 80615995 + MGP_LPJ_P0041608 Syngr1 protein_coding protein_coding MGP_LPJ_T0041609.1 MGP_LPJ_G0021993.1 mouse_genomes_project 15 80593580 80608156 + MGP_LPJ_P0041609 Syngr1 protein_coding protein_coding MGP_LPJ_T0041610.1 MGP_LPJ_G0021993.1 mouse_genomes_project 15 80611966 80612759 + MGP_LPJ_P0041610 Syngr1 protein_coding protein_coding MGP_LPJ_T0098179.1 MGP_LPJ_G0036460.1 mouse_genomes_project 15 88358218 88358322 + n-R5s42 rRNA rRNA MGP_LPJ_T0042567.1 MGP_LPJ_G0022306.1 mouse_genomes_project 15 104534258 104550230 - MGP_LPJ_P0042567 Itgb7 protein_coding protein_coding MGP_LPJ_T0042568.1 MGP_LPJ_G0022306.1 mouse_genomes_project 15 104543025 104550230 - MGP_LPJ_P0042568 Itgb7 protein_coding protein_coding MGP_LPJ_T0042335.1 MGP_LPJ_G0022223.1 mouse_genomes_project 15 101071040 101169868 + MGP_LPJ_P0042335 Spats2 protein_coding protein_coding MGP_LPJ_T0042368.1 MGP_LPJ_G0022230.1 mouse_genomes_project 15 101408728 101447594 - MGP_LPJ_P0042368 Nckap5l protein_coding protein_coding MGP_LPJ_T0042369.1 MGP_LPJ_G0022230.1 mouse_genomes_project 15 101410308 101411231 - MGP_LPJ_P0042369 Nckap5l protein_coding protein_coding MGP_LPJ_T0042370.1 MGP_LPJ_G0022230.1 mouse_genomes_project 15 101410708 101411227 - Nckap5l protein_coding processed_transcript MGP_LPJ_T0042371.1 MGP_LPJ_G0022230.1 mouse_genomes_project 15 101416113 101447558 - MGP_LPJ_P0042371 Nckap5l protein_coding protein_coding MGP_LPJ_T0006833.1 MGP_LPJ_G0005635.1 mouse_genomes_project 15 105478946 105481265 - Gm28265 lincRNA lincRNA MGP_LPJ_T0099111.1 MGP_LPJ_G0037374.1 mouse_genomes_project 15 43328999 43329092 + Gm24768 snRNA snRNA MGP_LPJ_T0041874.1 MGP_LPJ_G0022077.1 mouse_genomes_project 15 85262951 85265975 + Parvg protein_coding processed_transcript MGP_LPJ_T0041875.1 MGP_LPJ_G0022077.1 mouse_genomes_project 15 85263645 85283635 + MGP_LPJ_P0041875 Parvg protein_coding protein_coding MGP_LPJ_T0041876.1 MGP_LPJ_G0022077.1 mouse_genomes_project 15 85263659 85267815 + MGP_LPJ_P0041876 Parvg protein_coding nonsense_mediated_decay MGP_LPJ_T0041877.1 MGP_LPJ_G0022077.1 mouse_genomes_project 15 85263687 85267801 + MGP_LPJ_P0041877 Parvg protein_coding nonsense_mediated_decay MGP_LPJ_T0041878.1 MGP_LPJ_G0022077.1 mouse_genomes_project 15 85263720 85269020 + Parvg protein_coding processed_transcript MGP_LPJ_T0041879.1 MGP_LPJ_G0022077.1 mouse_genomes_project 15 85265043 85267851 + MGP_LPJ_P0041879 Parvg protein_coding protein_coding MGP_LPJ_T0041880.1 MGP_LPJ_G0022077.1 mouse_genomes_project 15 85265043 85283671 + MGP_LPJ_P0041880 Parvg protein_coding protein_coding MGP_LPJ_T0006823.1 MGP_LPJ_G0005626.1 mouse_genomes_project 15 100911347 100914674 + 4930578M01Rik lincRNA lincRNA MGP_LPJ_T0006771.1 MGP_LPJ_G0005595.1 mouse_genomes_project 15 36935581 36986713 - 2310043O21Rik lincRNA lincRNA MGP_LPJ_T0040564.1 MGP_LPJ_G0021672.1 mouse_genomes_project 15 29718606 29731114 - MGP_LPJ_P0040564 Cct5 protein_coding protein_coding MGP_LPJ_T0040565.1 MGP_LPJ_G0021672.1 mouse_genomes_project 15 29719786 29720865 - Cct5 protein_coding retained_intron MGP_LPJ_T0040566.1 MGP_LPJ_G0021672.1 mouse_genomes_project 15 29721300 29722384 - Cct5 protein_coding retained_intron MGP_LPJ_T0040567.1 MGP_LPJ_G0021672.1 mouse_genomes_project 15 29722200 29730806 - MGP_LPJ_P0040567 Cct5 protein_coding protein_coding MGP_LPJ_T0040568.1 MGP_LPJ_G0021672.1 mouse_genomes_project 15 29723346 29731007 - Cct5 protein_coding retained_intron MGP_LPJ_T0042166.1 MGP_LPJ_G0022161.1 mouse_genomes_project 15 96167661 96179671 - MGP_LPJ_P0042166 Twf1 protein_coding protein_coding MGP_LPJ_T0042167.1 MGP_LPJ_G0022161.1 mouse_genomes_project 15 96169437 96175249 - Twf1 protein_coding processed_transcript MGP_LPJ_T0042168.1 MGP_LPJ_G0022161.1 mouse_genomes_project 15 96170791 96171158 - Twf1 protein_coding retained_intron MGP_LPJ_T0042169.1 MGP_LPJ_G0022161.1 mouse_genomes_project 15 96174214 96179681 - MGP_LPJ_P0042169 Twf1 protein_coding protein_coding MGP_LPJ_T0042446.1 MGP_LPJ_G0022258.1 mouse_genomes_project 15 102705673 102734178 - MGP_LPJ_P0042446 Pou6f1 protein_coding protein_coding MGP_LPJ_T0042447.1 MGP_LPJ_G0022258.1 mouse_genomes_project 15 102705673 102718291 - MGP_LPJ_P0042447 Pou6f1 protein_coding protein_coding MGP_LPJ_T0042448.1 MGP_LPJ_G0022258.1 mouse_genomes_project 15 102705675 102734913 - MGP_LPJ_P0042448 Pou6f1 protein_coding protein_coding MGP_LPJ_T0042449.1 MGP_LPJ_G0022258.1 mouse_genomes_project 15 102705675 102723897 - MGP_LPJ_P0042449 Pou6f1 protein_coding nonsense_mediated_decay MGP_LPJ_T0042450.1 MGP_LPJ_G0022258.1 mouse_genomes_project 15 102705678 102712184 - Pou6f1 protein_coding retained_intron MGP_LPJ_T0042451.1 MGP_LPJ_G0022258.1 mouse_genomes_project 15 102708597 102727032 - MGP_LPJ_P0042451 Pou6f1 protein_coding nonsense_mediated_decay MGP_LPJ_T0042452.1 MGP_LPJ_G0022258.1 mouse_genomes_project 15 102708597 102727032 - MGP_LPJ_P0042452 Pou6f1 protein_coding nonsense_mediated_decay MGP_LPJ_T0042453.1 MGP_LPJ_G0022258.1 mouse_genomes_project 15 102718216 102724000 - Pou6f1 protein_coding retained_intron MGP_LPJ_T0042454.1 MGP_LPJ_G0022258.1 mouse_genomes_project 15 102718541 102734157 - Pou6f1 protein_coding processed_transcript MGP_LPJ_T0042455.1 MGP_LPJ_G0022258.1 mouse_genomes_project 15 102720552 102734157 - Pou6f1 protein_coding processed_transcript MGP_LPJ_T0099123.1 MGP_LPJ_G0037386.1 mouse_genomes_project 15 63374328 63374433 + Gm25628 snRNA snRNA MGP_LPJ_T0040827.1 MGP_LPJ_G0021768.1 mouse_genomes_project 15 56984240 57010288 + MGP_LPJ_P0040827 Fam83a protein_coding protein_coding MGP_LPJ_T0040828.1 MGP_LPJ_G0021768.1 mouse_genomes_project 15 56984731 56994400 + MGP_LPJ_P0040828 Fam83a protein_coding protein_coding MGP_LPJ_T0040829.1 MGP_LPJ_G0021768.1 mouse_genomes_project 15 57001414 57009326 + Fam83a protein_coding processed_transcript MGP_LPJ_T0041004.1 MGP_LPJ_G0021825.1 mouse_genomes_project 15 73470901 73485831 - MGP_LPJ_P0041004 Gpr20 protein_coding protein_coding MGP_LPJ_T0099124.1 MGP_LPJ_G0037387.1 mouse_genomes_project 15 65072277 65072466 + Gm23907 snRNA snRNA MGP_LPJ_T0042707.1 MGP_LPJ_G0022347.1 mouse_genomes_project 15 105947663 105955334 - MGP_LPJ_P0042707 Ppp1r1a protein_coding protein_coding MGP_LPJ_T0041163.1 MGP_LPJ_G0021877.1 mouse_genomes_project 15 76231886 76236304 - MGP_LPJ_P0041163 protein_coding protein_coding MGP_LPJ_T0100368.1 MGP_LPJ_G0038631.1 mouse_genomes_project 15 17799300 17799430 + Gm25976 snoRNA snoRNA MGP_LPJ_T0040779.1 MGP_LPJ_G0021753.1 mouse_genomes_project 15 53596093 53604151 + MGP_LPJ_P0040779 Nov protein_coding protein_coding MGP_LPJ_T0041908.1 MGP_LPJ_G0022089.1 mouse_genomes_project 15 86143197 86157013 + MGP_LPJ_P0041908 Ribc2 protein_coding protein_coding MGP_LPJ_T0000964.1 MGP_LPJ_G0000892.1 mouse_genomes_project 15 5648386 5651354 - TEC TEC MGP_LPJ_T0042512.1 MGP_LPJ_G0022270.1 mouse_genomes_project 15 103411063 103421109 + MGP_LPJ_P0042512 Grasp protein_coding protein_coding MGP_LPJ_T0041324.1 MGP_LPJ_G0021911.1 mouse_genomes_project 15 76886755 76893531 - MGP_LPJ_P0041324 Recql4 protein_coding protein_coding MGP_LPJ_T0040578.1 MGP_LPJ_G0021679.1 mouse_genomes_project 15 32263461 32286381 + Mtdh protein_coding retained_intron MGP_LPJ_T0040579.1 MGP_LPJ_G0021679.1 mouse_genomes_project 15 32263486 32328683 + MGP_LPJ_P0040579 Mtdh protein_coding protein_coding MGP_LPJ_T0040580.1 MGP_LPJ_G0021679.1 mouse_genomes_project 15 32263492 32311031 + Mtdh protein_coding retained_intron MGP_LPJ_T0040581.1 MGP_LPJ_G0021679.1 mouse_genomes_project 15 32263803 32320644 + MGP_LPJ_P0040581 Mtdh protein_coding nonsense_mediated_decay MGP_LPJ_T0040582.1 MGP_LPJ_G0021679.1 mouse_genomes_project 15 32264075 32323066 + MGP_LPJ_P0040582 Mtdh protein_coding protein_coding MGP_LPJ_T0040583.1 MGP_LPJ_G0021679.1 mouse_genomes_project 15 32264086 32323097 + MGP_LPJ_P0040583 Mtdh protein_coding protein_coding MGP_LPJ_T0040584.1 MGP_LPJ_G0021679.1 mouse_genomes_project 15 32264089 32310433 + MGP_LPJ_P0040584 Mtdh protein_coding protein_coding MGP_LPJ_T0040585.1 MGP_LPJ_G0021679.1 mouse_genomes_project 15 32264618 32303838 + Mtdh protein_coding processed_transcript MGP_LPJ_T0040586.1 MGP_LPJ_G0021679.1 mouse_genomes_project 15 32300802 32326997 + MGP_LPJ_P0040586 Mtdh protein_coding protein_coding MGP_LPJ_T0040587.1 MGP_LPJ_G0021679.1 mouse_genomes_project 15 32319797 32327577 + Mtdh protein_coding processed_transcript MGP_LPJ_T0010051.1 MGP_LPJ_G0008169.1 mouse_genomes_project 15 35120939 35121013 - Gm25303 miRNA miRNA MGP_LPJ_T0041496.1 MGP_LPJ_G0021968.1 mouse_genomes_project 15 79678121 79698129 + MGP_LPJ_P0041496 Pick1 protein_coding protein_coding MGP_LPJ_T0041497.1 MGP_LPJ_G0021968.1 mouse_genomes_project 15 79678330 79698111 + MGP_LPJ_P0041497 Pick1 protein_coding protein_coding MGP_LPJ_T0041498.1 MGP_LPJ_G0021968.1 mouse_genomes_project 15 79678339 79705325 + MGP_LPJ_P0041498 Pick1 protein_coding protein_coding MGP_LPJ_T0041499.1 MGP_LPJ_G0021968.1 mouse_genomes_project 15 79678359 79696603 + Pick1 protein_coding retained_intron MGP_LPJ_T0041500.1 MGP_LPJ_G0021968.1 mouse_genomes_project 15 79678364 79696603 + Pick1 protein_coding retained_intron MGP_LPJ_T0041501.1 MGP_LPJ_G0021968.1 mouse_genomes_project 15 79678406 79683177 + Pick1 protein_coding processed_transcript MGP_LPJ_T0041502.1 MGP_LPJ_G0021968.1 mouse_genomes_project 15 79678453 79690125 + Pick1 protein_coding retained_intron MGP_LPJ_T0041503.1 MGP_LPJ_G0021968.1 mouse_genomes_project 15 79678650 79697974 + MGP_LPJ_P0041503 Pick1 protein_coding protein_coding MGP_LPJ_T0041504.1 MGP_LPJ_G0021968.1 mouse_genomes_project 15 79691720 79696286 + Pick1 protein_coding processed_transcript MGP_LPJ_T0041505.1 MGP_LPJ_G0021968.1 mouse_genomes_project 15 79693534 79696262 + Pick1 protein_coding processed_transcript MGP_LPJ_T0041506.1 MGP_LPJ_G0021968.1 mouse_genomes_project 15 79693931 79696374 + Pick1 protein_coding processed_transcript MGP_LPJ_T0041507.1 MGP_LPJ_G0021968.1 mouse_genomes_project 15 79694996 79698111 + Pick1 protein_coding processed_transcript MGP_LPJ_T0042187.1 MGP_LPJ_G0022171.1 mouse_genomes_project 15 98410197 98422200 - MGP_LPJ_P0042187 Slc38a2 protein_coding protein_coding MGP_LPJ_T0017409.1 MGP_LPJ_G0015217.1 mouse_genomes_project 15 78036919 78037858 + Gm20688 processed_transcript processed_transcript MGP_LPJ_T0041086.1 MGP_LPJ_G0021854.1 mouse_genomes_project 15 75458344 75564702 + MGP_LPJ_P0041086 Ly6l protein_coding protein_coding MGP_LPJ_T0040924.1 MGP_LPJ_G0021803.1 mouse_genomes_project 15 65258433 65299575 - MGP_LPJ_P0040924 Oc90 protein_coding protein_coding MGP_LPJ_T0040925.1 MGP_LPJ_G0021803.1 mouse_genomes_project 15 65258433 65299718 - MGP_LPJ_P0040925 Oc90 protein_coding protein_coding MGP_LPJ_T0040926.1 MGP_LPJ_G0021803.1 mouse_genomes_project 15 65258433 65286228 - MGP_LPJ_P0040926 Oc90 protein_coding protein_coding MGP_LPJ_T0040927.1 MGP_LPJ_G0021803.1 mouse_genomes_project 15 65258772 65273709 - MGP_LPJ_P0040927 Oc90 protein_coding protein_coding MGP_LPJ_T0040928.1 MGP_LPJ_G0021803.1 mouse_genomes_project 15 65258900 65270909 - MGP_LPJ_P0040928 Oc90 protein_coding protein_coding MGP_LPJ_T0042171.1 MGP_LPJ_G0022163.1 mouse_genomes_project 15 96849927 97176704 - MGP_LPJ_P0042171 Nell2 protein_coding protein_coding MGP_LPJ_T0042172.1 MGP_LPJ_G0022163.1 mouse_genomes_project 15 96850406 97176250 - MGP_LPJ_P0042172 Nell2 protein_coding protein_coding MGP_LPJ_T0042273.1 MGP_LPJ_G0022196.1 mouse_genomes_project 15 100298208 100304788 + MGP_LPJ_P0042273 Olfr282 protein_coding protein_coding MGP_LPJ_T0042274.1 MGP_LPJ_G0022196.1 mouse_genomes_project 15 100304342 100305270 + MGP_LPJ_P0042274 Olfr282 protein_coding protein_coding MGP_LPJ_T0041379.1 MGP_LPJ_G0021931.1 mouse_genomes_project 15 78063945 78069211 - MGP_LPJ_P0041379 Apol8 protein_coding protein_coding MGP_LPJ_T0041380.1 MGP_LPJ_G0021931.1 mouse_genomes_project 15 78064759 78071406 - MGP_LPJ_P0041380 Apol8 protein_coding protein_coding MGP_LPJ_T0100391.1 MGP_LPJ_G0038654.1 mouse_genomes_project 15 57044289 57044425 - Gm22299 snoRNA snoRNA MGP_LPJ_T0099120.1 MGP_LPJ_G0037383.1 mouse_genomes_project 15 57878588 57878744 - Gm24041 snRNA snRNA MGP_LPJ_T0041454.1 MGP_LPJ_G0021957.1 mouse_genomes_project 15 79359054 79364132 + MGP_LPJ_P0041454 Lgals1 protein_coding protein_coding MGP_LPJ_T0040443.1 MGP_LPJ_G0021627.1 mouse_genomes_project 15 7522803 7530465 + MGP_LPJ_P0040443 Rad1 protein_coding protein_coding MGP_LPJ_T0040444.1 MGP_LPJ_G0021627.1 mouse_genomes_project 15 7522834 7530460 + Rad1 protein_coding retained_intron MGP_LPJ_T0040445.1 MGP_LPJ_G0021627.1 mouse_genomes_project 15 7522854 7536517 + MGP_LPJ_P0040445 Rad1 protein_coding protein_coding MGP_LPJ_T0040446.1 MGP_LPJ_G0021627.1 mouse_genomes_project 15 7522865 7527133 + MGP_LPJ_P0040446 Rad1 protein_coding protein_coding MGP_LPJ_T0040447.1 MGP_LPJ_G0021627.1 mouse_genomes_project 15 7523260 7530139 + MGP_LPJ_P0040447 Rad1 protein_coding nonsense_mediated_decay MGP_LPJ_T0040448.1 MGP_LPJ_G0021627.1 mouse_genomes_project 15 7523394 7530450 + MGP_LPJ_P0040448 Rad1 protein_coding nonsense_mediated_decay MGP_LPJ_T0003630.1 MGP_LPJ_G0003290.1 mouse_genomes_project 15 81996532 82001170 - Gm17025 antisense antisense MGP_LPJ_T0042410.1 MGP_LPJ_G0022245.1 mouse_genomes_project 15 102008386 102061675 + MGP_LPJ_P0042410 Larp4 protein_coding protein_coding MGP_LPJ_T0042411.1 MGP_LPJ_G0022245.1 mouse_genomes_project 15 102011638 102061690 + MGP_LPJ_P0042411 Larp4 protein_coding unknown_likely_coding MGP_LPJ_T0011402.1 MGP_LPJ_G0009520.1 mouse_genomes_project 15 41592872 41593168 - Gm22037 misc_RNA misc_RNA MGP_LPJ_T0042313.1 MGP_LPJ_G0022214.1 mouse_genomes_project 15 100744824 100786398 - MGP_LPJ_P0042313 Kmt2d protein_coding protein_coding MGP_LPJ_T0042314.1 MGP_LPJ_G0022214.1 mouse_genomes_project 15 100744828 100786415 - MGP_LPJ_P0042314 Kmt2d protein_coding protein_coding MGP_LPJ_T0042315.1 MGP_LPJ_G0022214.1 mouse_genomes_project 15 100747445 100750266 - MGP_LPJ_P0042315 Kmt2d protein_coding protein_coding MGP_LPJ_T0042316.1 MGP_LPJ_G0022214.1 mouse_genomes_project 15 100747644 100786287 - MGP_LPJ_P0042316 Kmt2d protein_coding unknown_likely_coding MGP_LPJ_T0042317.1 MGP_LPJ_G0022214.1 mouse_genomes_project 15 100767914 100769510 - MGP_LPJ_P0042317 Kmt2d protein_coding protein_coding MGP_LPJ_T0041401.1 MGP_LPJ_G0021936.1 mouse_genomes_project 15 78325285 78452272 - MGP_LPJ_P0041401 Cacng2 protein_coding protein_coding MGP_LPJ_T0099109.1 MGP_LPJ_G0037372.1 mouse_genomes_project 15 35931617 35931737 - Gm24833 snRNA snRNA MGP_LPJ_T0041627.1 MGP_LPJ_G0022003.1 mouse_genomes_project 15 81251705 81496716 + MGP_LPJ_P0041627 Tnrc6b protein_coding protein_coding MGP_LPJ_T0041628.1 MGP_LPJ_G0022003.1 mouse_genomes_project 15 81304850 81482647 + MGP_LPJ_P0041628 Tnrc6b protein_coding unknown_likely_coding MGP_LPJ_T0099104.1 MGP_LPJ_G0037367.1 mouse_genomes_project 15 22644912 22645069 - Gm22810 snRNA snRNA MGP_LPJ_T0041770.1 MGP_LPJ_G0022040.1 mouse_genomes_project 15 82958484 82975187 + MGP_LPJ_P0041770 Wbp2nl protein_coding protein_coding MGP_LPJ_T0040591.1 MGP_LPJ_G0021682.1 mouse_genomes_project 15 32549388 32556369 - MGP_LPJ_P0040591 9430069I07Rik protein_coding protein_coding MGP_LPJ_T0040804.1 MGP_LPJ_G0021761.1 mouse_genomes_project 15 54446512 54522790 + MGP_LPJ_P0040804 Mtbp protein_coding protein_coding MGP_LPJ_T0040805.1 MGP_LPJ_G0021761.1 mouse_genomes_project 15 54446699 54504336 + MGP_LPJ_P0040805 Mtbp protein_coding protein_coding MGP_LPJ_T0040806.1 MGP_LPJ_G0021761.1 mouse_genomes_project 15 54446839 54458182 + MGP_LPJ_P0040806 Mtbp protein_coding nonsense_mediated_decay MGP_LPJ_T0040807.1 MGP_LPJ_G0021761.1 mouse_genomes_project 15 54467794 54522789 + MGP_LPJ_P0040807 Mtbp protein_coding protein_coding MGP_LPJ_T0040808.1 MGP_LPJ_G0021761.1 mouse_genomes_project 15 54513953 54516305 + Mtbp protein_coding retained_intron MGP_LPJ_T0040809.1 MGP_LPJ_G0021761.1 mouse_genomes_project 15 54517818 54522788 + Mtbp protein_coding processed_transcript MGP_LPJ_T0040854.1 MGP_LPJ_G0021779.1 mouse_genomes_project 15 57841493 57882796 - MGP_LPJ_P0040854 Tmem65 protein_coding protein_coding MGP_LPJ_T0099113.1 MGP_LPJ_G0037376.1 mouse_genomes_project 15 47109100 47109233 + Gm25007 snRNA snRNA MGP_LPJ_T0003638.1 MGP_LPJ_G0003296.1 mouse_genomes_project 15 99538118 99544588 + Rapgef3os1 antisense antisense MGP_LPJ_T0003642.1 MGP_LPJ_G0003300.1 mouse_genomes_project 15 100483620 100484719 + Gm29331 antisense antisense MGP_LPJ_T0040830.1 MGP_LPJ_G0021769.1 mouse_genomes_project 15 57021363 57035051 - MGP_LPJ_P0040830 protein_coding unknown_likely_coding MGP_LPJ_T0040831.1 MGP_LPJ_G0021769.1 mouse_genomes_project 15 57023120 57028746 - protein_coding processed_transcript MGP_LPJ_T0040833.1 MGP_LPJ_G0021769.1 mouse_genomes_project 15 57029662 57035041 - MGP_LPJ_P0040833 protein_coding nonsense_mediated_decay MGP_LPJ_T0040834.1 MGP_LPJ_G0021769.1 mouse_genomes_project 15 57031806 57035176 - MGP_LPJ_P0040834 protein_coding protein_coding MGP_LPJ_T0041790.1 MGP_LPJ_G0022053.1 mouse_genomes_project 15 83525338 83531236 - MGP_LPJ_P0041790 Cyp2d40 protein_coding protein_coding MGP_LPJ_T0041817.1 MGP_LPJ_G0022059.1 mouse_genomes_project 15 83964442 83987729 - MGP_LPJ_P0041817 Poldip3 protein_coding protein_coding MGP_LPJ_T0041818.1 MGP_LPJ_G0022059.1 mouse_genomes_project 15 83964442 83987782 - MGP_LPJ_P0041818 Poldip3 protein_coding protein_coding MGP_LPJ_T0041819.1 MGP_LPJ_G0022059.1 mouse_genomes_project 15 83971583 83987699 - MGP_LPJ_P0041819 Poldip3 protein_coding protein_coding MGP_LPJ_T0041820.1 MGP_LPJ_G0022059.1 mouse_genomes_project 15 83971678 83974368 - Poldip3 protein_coding retained_intron MGP_LPJ_T0041821.1 MGP_LPJ_G0022059.1 mouse_genomes_project 15 83974144 83987727 - Poldip3 protein_coding retained_intron MGP_LPJ_T0041822.1 MGP_LPJ_G0022059.1 mouse_genomes_project 15 83976284 83987734 - Poldip3 protein_coding retained_intron MGP_LPJ_T0006776.1 MGP_LPJ_G0005600.1 mouse_genomes_project 15 41815785 41862221 - Gm10373 lincRNA lincRNA MGP_LPJ_T0041764.1 MGP_LPJ_G0022037.1 mouse_genomes_project 15 82882714 82895181 - MGP_LPJ_P0041764 Cenpm protein_coding protein_coding MGP_LPJ_T0041765.1 MGP_LPJ_G0022037.1 mouse_genomes_project 15 82882714 82895181 - MGP_LPJ_P0041765 Cenpm protein_coding protein_coding MGP_LPJ_T0003612.1 MGP_LPJ_G0003277.1 mouse_genomes_project 15 56691979 56692791 - Gm16006 antisense antisense MGP_LPJ_T0013102.1 MGP_LPJ_G0011193.1 mouse_genomes_project 15 101840638 101840932 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006774.1 MGP_LPJ_G0005598.1 mouse_genomes_project 15 40107066 40140132 - Gm26854 lincRNA lincRNA MGP_LPJ_T0040710.1 MGP_LPJ_G0021722.1 mouse_genomes_project 15 38142797 38215963 - MGP_LPJ_P0040710 Lrp12 protein_coding protein_coding MGP_LPJ_T0040711.1 MGP_LPJ_G0021722.1 mouse_genomes_project 15 38142797 38215757 - MGP_LPJ_P0040711 Lrp12 protein_coding protein_coding MGP_LPJ_T0040712.1 MGP_LPJ_G0021722.1 mouse_genomes_project 15 38176816 38215675 - Lrp12 protein_coding retained_intron MGP_LPJ_T0041059.1 MGP_LPJ_G0021846.1 mouse_genomes_project 15 74746756 74779018 - 2010109I03Rik protein_coding processed_transcript MGP_LPJ_T0041060.1 MGP_LPJ_G0021846.1 mouse_genomes_project 15 74757546 74761910 - MGP_LPJ_P0041060 2010109I03Rik protein_coding protein_coding MGP_LPJ_T0013088.1 MGP_LPJ_G0011179.1 mouse_genomes_project 15 80161411 80174497 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010102.1 MGP_LPJ_G0008220.1 mouse_genomes_project 15 90650713 90650788 - Mir6959 miRNA miRNA MGP_LPJ_T0040858.1 MGP_LPJ_G0021783.1 mouse_genomes_project 15 57952856 57996837 - MGP_LPJ_P0040858 Tatdn1 protein_coding protein_coding MGP_LPJ_T0040859.1 MGP_LPJ_G0021783.1 mouse_genomes_project 15 57964005 57996805 - MGP_LPJ_P0040859 Tatdn1 protein_coding unknown_likely_coding MGP_LPJ_T0041078.1 MGP_LPJ_G0021849.1 mouse_genomes_project 15 75150746 75153180 + MGP_LPJ_P0041078 protein_coding protein_coding MGP_LPJ_T0040577.1 MGP_LPJ_G0021678.1 mouse_genomes_project 15 31895279 31899293 - MGP_LPJ_P0040577 Tspyl5 protein_coding protein_coding MGP_LPJ_T0010063.1 MGP_LPJ_G0008181.1 mouse_genomes_project 15 73004845 73004913 - Mir151 miRNA miRNA MGP_LPJ_T0006763.1 MGP_LPJ_G0005588.1 mouse_genomes_project 15 22815469 22860539 - Gm2824 lincRNA lincRNA MGP_LPJ_T0006764.1 MGP_LPJ_G0005588.1 mouse_genomes_project 15 22838513 22860482 - Gm2824 lincRNA lincRNA MGP_LPJ_T0003643.1 MGP_LPJ_G0003301.1 mouse_genomes_project 15 101414394 101423821 + Nckap5los antisense antisense MGP_LPJ_T0010058.1 MGP_LPJ_G0008176.1 mouse_genomes_project 15 52433263 52433338 - Mir28c miRNA miRNA MGP_LPJ_T0040909.1 MGP_LPJ_G0021799.1 mouse_genomes_project 15 64047129 64292050 - MGP_LPJ_P0040909 Adcy8 protein_coding protein_coding MGP_LPJ_T0040367.1 MGP_LPJ_G0021607.1 mouse_genomes_project 15 4761555 4791631 + MGP_LPJ_P0040367 Gdnf protein_coding protein_coding MGP_LPJ_T0100409.1 MGP_LPJ_G0038672.1 mouse_genomes_project 15 101077651 101077757 - Gm25183 snoRNA snoRNA MGP_LPJ_T0040407.1 MGP_LPJ_G0021618.1 mouse_genomes_project 15 6347671 6373263 + protein_coding retained_intron MGP_LPJ_T0017397.1 MGP_LPJ_G0015210.1 mouse_genomes_project 15 57226135 57341235 + Gm15943 processed_transcript processed_transcript MGP_LPJ_T0100388.1 MGP_LPJ_G0038651.1 mouse_genomes_project 15 46284440 46284577 + Gm23530 snoRNA snoRNA MGP_LPJ_T0042470.1 MGP_LPJ_G0022264.1 mouse_genomes_project 15 102906935 102922566 + MGP_LPJ_P0042470 Slc4a8 protein_coding nonsense_mediated_decay MGP_LPJ_T0042471.1 MGP_LPJ_G0022264.1 mouse_genomes_project 15 102906954 102922446 + Slc4a8 protein_coding retained_intron MGP_LPJ_T0042472.1 MGP_LPJ_G0022264.1 mouse_genomes_project 15 102906996 102965405 + MGP_LPJ_P0042472 Slc4a8 protein_coding protein_coding MGP_LPJ_T0042473.1 MGP_LPJ_G0022264.1 mouse_genomes_project 15 102952519 102956062 + Slc4a8 protein_coding retained_intron MGP_LPJ_T0042474.1 MGP_LPJ_G0022264.1 mouse_genomes_project 15 102961966 102965803 + Slc4a8 protein_coding processed_transcript MGP_LPJ_T0042475.1 MGP_LPJ_G0022264.1 mouse_genomes_project 15 102964127 102965574 + Slc4a8 protein_coding retained_intron MGP_LPJ_T0010061.1 MGP_LPJ_G0008179.1 mouse_genomes_project 15 67829642 67829724 - Mir30d miRNA miRNA MGP_LPJ_T0041542.1 MGP_LPJ_G0021976.1 mouse_genomes_project 15 79983459 79995250 + MGP_LPJ_P0041542 Kdelr3 protein_coding protein_coding MGP_LPJ_T0101903.1 MGP_LPJ_G0039940.1 mouse_genomes_project 15 100378599 100378837 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0006781.1 MGP_LPJ_G0005603.1 mouse_genomes_project 15 45065200 45085319 + 4930548G14Rik lincRNA lincRNA MGP_LPJ_T0006782.1 MGP_LPJ_G0005603.1 mouse_genomes_project 15 45067348 45067666 + 4930548G14Rik lincRNA lincRNA MGP_LPJ_T0101494.1 MGP_LPJ_G0039634.1 mouse_genomes_project 15 75439810 75444034 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101495.1 MGP_LPJ_G0039634.1 mouse_genomes_project 15 75440170 75443641 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0010082.1 MGP_LPJ_G0008200.1 mouse_genomes_project 15 83069550 83069610 - Mir7684 miRNA miRNA MGP_LPJ_T0040936.1 MGP_LPJ_G0021809.1 mouse_genomes_project 15 66080528 66267368 + MGP_LPJ_P0040936 Tg protein_coding protein_coding MGP_LPJ_T0040937.1 MGP_LPJ_G0021809.1 mouse_genomes_project 15 66098416 66267254 + MGP_LPJ_P0040937 Tg protein_coding nonsense_mediated_decay MGP_LPJ_T0040938.1 MGP_LPJ_G0021809.1 mouse_genomes_project 15 66112399 66127539 + Tg protein_coding processed_transcript MGP_LPJ_T0040939.1 MGP_LPJ_G0021809.1 mouse_genomes_project 15 66116402 66267254 + MGP_LPJ_P0040939 Tg protein_coding protein_coding MGP_LPJ_T0040940.1 MGP_LPJ_G0021809.1 mouse_genomes_project 15 66128292 66137651 + Tg protein_coding processed_transcript MGP_LPJ_T0040941.1 MGP_LPJ_G0021809.1 mouse_genomes_project 15 66128934 66142033 + Tg protein_coding processed_transcript MGP_LPJ_T0040942.1 MGP_LPJ_G0021809.1 mouse_genomes_project 15 66148578 66267368 + MGP_LPJ_P0040942 Tg protein_coding protein_coding MGP_LPJ_T0040948.1 MGP_LPJ_G0021809.1 mouse_genomes_project 15 66214759 66267368 + Tg protein_coding processed_transcript MGP_LPJ_T0041783.1 MGP_LPJ_G0022046.1 mouse_genomes_project 15 83064968 83085053 - MGP_LPJ_P0041783 Cyp2d11 protein_coding protein_coding MGP_LPJ_T0010110.1 MGP_LPJ_G0008228.1 mouse_genomes_project 15 103810097 103810235 + Gm44393 miRNA miRNA MGP_LPJ_T0040860.1 MGP_LPJ_G0021784.1 mouse_genomes_project 15 57996916 58002596 + MGP_LPJ_P0040860 Ndufb9 protein_coding protein_coding MGP_LPJ_T0100398.1 MGP_LPJ_G0038661.1 mouse_genomes_project 15 71479817 71481430 + Gm22519 snoRNA snoRNA MGP_LPJ_T0041472.1 MGP_LPJ_G0021962.1 mouse_genomes_project 15 79495249 79505034 - MGP_LPJ_P0041472 Ankrd54 protein_coding protein_coding MGP_LPJ_T0041473.1 MGP_LPJ_G0021962.1 mouse_genomes_project 15 79495259 79505034 - Ankrd54 protein_coding retained_intron MGP_LPJ_T0041474.1 MGP_LPJ_G0021962.1 mouse_genomes_project 15 79495729 79497569 - MGP_LPJ_P0041474 Ankrd54 protein_coding protein_coding MGP_LPJ_T0041475.1 MGP_LPJ_G0021962.1 mouse_genomes_project 15 79495923 79497500 - MGP_LPJ_P0041475 Ankrd54 protein_coding protein_coding MGP_LPJ_T0041476.1 MGP_LPJ_G0021962.1 mouse_genomes_project 15 79497541 79505031 - MGP_LPJ_P0041476 Ankrd54 protein_coding protein_coding MGP_LPJ_T0041477.1 MGP_LPJ_G0021962.1 mouse_genomes_project 15 79497570 79504985 - MGP_LPJ_P0041477 Ankrd54 protein_coding nonsense_mediated_decay MGP_LPJ_T0041478.1 MGP_LPJ_G0021962.1 mouse_genomes_project 15 79501774 79505042 - Ankrd54 protein_coding retained_intron MGP_LPJ_T0100387.1 MGP_LPJ_G0038650.1 mouse_genomes_project 15 43336631 43336774 + Gm23343 snoRNA snoRNA MGP_LPJ_T0003639.1 MGP_LPJ_G0003297.1 mouse_genomes_project 15 99544175 99546337 + Rapgef3os2 antisense antisense MGP_LPJ_T0041962.1 MGP_LPJ_G0022108.1 mouse_genomes_project 15 90114390 90125475 - Alg12 protein_coding retained_intron MGP_LPJ_T0041963.1 MGP_LPJ_G0022108.1 mouse_genomes_project 15 90114390 90130446 - MGP_LPJ_P0041963 Alg12 protein_coding protein_coding MGP_LPJ_T0041964.1 MGP_LPJ_G0022108.1 mouse_genomes_project 15 90114391 90130413 - MGP_LPJ_P0041964 Alg12 protein_coding protein_coding MGP_LPJ_T0041965.1 MGP_LPJ_G0022108.1 mouse_genomes_project 15 90123911 90130220 - MGP_LPJ_P0041965 Alg12 protein_coding protein_coding MGP_LPJ_T0041112.1 MGP_LPJ_G0021862.1 mouse_genomes_project 15 75990354 75995403 + MGP_LPJ_P0041112 Gsdmd protein_coding protein_coding MGP_LPJ_T0040933.1 MGP_LPJ_G0021806.1 mouse_genomes_project 15 65778432 65899691 - MGP_LPJ_P0040933 Lrrc6 protein_coding protein_coding MGP_LPJ_T0006768.1 MGP_LPJ_G0005592.1 mouse_genomes_project 15 36027518 36048554 + Gm15942 lincRNA lincRNA MGP_LPJ_T0040868.1 MGP_LPJ_G0021788.1 mouse_genomes_project 15 58462885 58640342 + MGP_LPJ_P0040868 Nsmce2 protein_coding protein_coding MGP_LPJ_T0040869.1 MGP_LPJ_G0021788.1 mouse_genomes_project 15 58462885 58703291 + MGP_LPJ_P0040869 Nsmce2 protein_coding protein_coding MGP_LPJ_T0040870.1 MGP_LPJ_G0021788.1 mouse_genomes_project 15 58462955 58694770 + MGP_LPJ_P0040870 Nsmce2 protein_coding unknown_likely_coding MGP_LPJ_T0011398.1 MGP_LPJ_G0009516.1 mouse_genomes_project 15 7076895 7077183 + Gm26350 misc_RNA misc_RNA MGP_LPJ_T0042009.1 MGP_LPJ_G0022119.1 mouse_genomes_project 15 90463751 90473803 - MGP_LPJ_P0042009 Mapk12 protein_coding protein_coding MGP_LPJ_T0042431.1 MGP_LPJ_G0022252.1 mouse_genomes_project 15 102381032 102389315 + MGP_LPJ_P0042431 protein_coding protein_coding MGP_LPJ_T0042695.1 MGP_LPJ_G0022343.1 mouse_genomes_project 15 105821380 105844275 - MGP_LPJ_P0042695 Gtsf1 protein_coding protein_coding MGP_LPJ_T0042696.1 MGP_LPJ_G0022343.1 mouse_genomes_project 15 105821433 105842411 - MGP_LPJ_P0042696 Gtsf1 protein_coding protein_coding MGP_LPJ_T0042697.1 MGP_LPJ_G0022343.1 mouse_genomes_project 15 105821433 105842305 - MGP_LPJ_P0042697 Gtsf1 protein_coding protein_coding MGP_LPJ_T0042698.1 MGP_LPJ_G0022343.1 mouse_genomes_project 15 105821436 105843367 - MGP_LPJ_P0042698 Gtsf1 protein_coding protein_coding MGP_LPJ_T0042699.1 MGP_LPJ_G0022343.1 mouse_genomes_project 15 105821458 105844154 - MGP_LPJ_P0042699 Gtsf1 protein_coding protein_coding MGP_LPJ_T0042700.1 MGP_LPJ_G0022343.1 mouse_genomes_project 15 105821470 105844149 - MGP_LPJ_P0042700 Gtsf1 protein_coding protein_coding MGP_LPJ_T0042701.1 MGP_LPJ_G0022343.1 mouse_genomes_project 15 105821489 105844184 - MGP_LPJ_P0042701 Gtsf1 protein_coding protein_coding MGP_LPJ_T0042702.1 MGP_LPJ_G0022343.1 mouse_genomes_project 15 105828857 105844214 - MGP_LPJ_P0042702 Gtsf1 protein_coding protein_coding MGP_LPJ_T0042703.1 MGP_LPJ_G0022343.1 mouse_genomes_project 15 105832091 105844049 - MGP_LPJ_P0042703 Gtsf1 protein_coding protein_coding MGP_LPJ_T0040457.1 MGP_LPJ_G0021632.1 mouse_genomes_project 15 8075176 8103707 + MGP_LPJ_P0040457 Slc45a2 protein_coding protein_coding MGP_LPJ_T0042467.1 MGP_LPJ_G0022263.1 mouse_genomes_project 15 102832635 102869859 - MGP_LPJ_P0042467 Galnt6 protein_coding protein_coding MGP_LPJ_T0042468.1 MGP_LPJ_G0022263.1 mouse_genomes_project 15 102832637 102869859 - MGP_LPJ_P0042468 Galnt6 protein_coding protein_coding MGP_LPJ_T0042469.1 MGP_LPJ_G0022263.1 mouse_genomes_project 15 102833686 102861085 - MGP_LPJ_P0042469 Galnt6 protein_coding protein_coding MGP_LPJ_T0041754.1 MGP_LPJ_G0022031.1 mouse_genomes_project 15 82689789 82697177 + MGP_LPJ_P0041754 4930407I10Rik protein_coding protein_coding MGP_LPJ_T0042444.1 MGP_LPJ_G0022256.1 mouse_genomes_project 15 102614330 102630017 - MGP_LPJ_P0042444 Csrnp2 protein_coding protein_coding MGP_LPJ_T0003619.1 MGP_LPJ_G0003284.1 mouse_genomes_project 15 74550946 74552160 + 4933427E11Rik antisense antisense MGP_LPJ_T0003620.1 MGP_LPJ_G0003284.1 mouse_genomes_project 15 74550946 74552158 + 4933427E11Rik antisense antisense MGP_LPJ_T0042532.1 MGP_LPJ_G0022285.1 mouse_genomes_project 15 103987105 103994007 - MGP_LPJ_P0042532 Krt5 protein_coding protein_coding MGP_LPJ_T0010114.1 MGP_LPJ_G0008232.1 mouse_genomes_project 15 105016576 105016651 - Mir688 miRNA miRNA MGP_LPJ_T0011396.1 MGP_LPJ_G0009514.1 mouse_genomes_project 15 654148 654418 + Gm23228 misc_RNA misc_RNA MGP_LPJ_T0040673.1 MGP_LPJ_G0021708.1 mouse_genomes_project 15 36255738 36305091 - MGP_LPJ_P0040673 Rrm2b protein_coding protein_coding MGP_LPJ_T0040674.1 MGP_LPJ_G0021708.1 mouse_genomes_project 15 36261060 36304879 - MGP_LPJ_P0040674 Rrm2b protein_coding protein_coding MGP_LPJ_T0040675.1 MGP_LPJ_G0021708.1 mouse_genomes_project 15 36261060 36304879 - MGP_LPJ_P0040675 Rrm2b protein_coding protein_coding MGP_LPJ_T0040676.1 MGP_LPJ_G0021708.1 mouse_genomes_project 15 36261060 36304879 - MGP_LPJ_P0040676 Rrm2b protein_coding nonsense_mediated_decay MGP_LPJ_T0040677.1 MGP_LPJ_G0021708.1 mouse_genomes_project 15 36265446 36304917 - MGP_LPJ_P0040677 Rrm2b protein_coding nonsense_mediated_decay MGP_LPJ_T0040678.1 MGP_LPJ_G0021708.1 mouse_genomes_project 15 36286644 36299280 - Rrm2b protein_coding retained_intron MGP_LPJ_T0040679.1 MGP_LPJ_G0021708.1 mouse_genomes_project 15 36286749 36304837 - MGP_LPJ_P0040679 Rrm2b protein_coding protein_coding MGP_LPJ_T0040680.1 MGP_LPJ_G0021708.1 mouse_genomes_project 15 36288348 36305340 - MGP_LPJ_P0040680 Rrm2b protein_coding protein_coding MGP_LPJ_T0040322.1 MGP_LPJ_G0021599.1 mouse_genomes_project 15 2051349 2091154 - Ptger4 protein_coding processed_transcript MGP_LPJ_T0040323.1 MGP_LPJ_G0021599.1 mouse_genomes_project 15 2080569 2092616 - MGP_LPJ_P0040323 Ptger4 protein_coding protein_coding MGP_LPJ_T0040324.1 MGP_LPJ_G0021599.1 mouse_genomes_project 15 2080569 2092631 - MGP_LPJ_P0040324 Ptger4 protein_coding protein_coding MGP_LPJ_T0042602.1 MGP_LPJ_G0022315.1 mouse_genomes_project 15 104778970 104788204 + MGP_LPJ_P0042602 Amhr2 protein_coding protein_coding MGP_LPJ_T0042603.1 MGP_LPJ_G0022315.1 mouse_genomes_project 15 104785736 104788119 + MGP_LPJ_P0042603 Amhr2 protein_coding protein_coding MGP_LPJ_T0042604.1 MGP_LPJ_G0022315.1 mouse_genomes_project 15 104785900 104786449 + Amhr2 protein_coding retained_intron MGP_LPJ_T0100392.1 MGP_LPJ_G0038655.1 mouse_genomes_project 15 57156777 57156904 + Gm22488 snoRNA snoRNA MGP_LPJ_T0040554.1 MGP_LPJ_G0021668.1 mouse_genomes_project 15 29386772 29469046 - MGP_LPJ_P0040554 Ankrd33b protein_coding protein_coding MGP_LPJ_T0040555.1 MGP_LPJ_G0021668.1 mouse_genomes_project 15 29386773 29469013 - MGP_LPJ_P0040555 Ankrd33b protein_coding protein_coding MGP_LPJ_T0040556.1 MGP_LPJ_G0021668.1 mouse_genomes_project 15 29388002 29468819 - MGP_LPJ_P0040556 Ankrd33b protein_coding nonsense_mediated_decay MGP_LPJ_T0040557.1 MGP_LPJ_G0021668.1 mouse_genomes_project 15 29388915 29469013 - MGP_LPJ_P0040557 Ankrd33b protein_coding nonsense_mediated_decay MGP_LPJ_T0040558.1 MGP_LPJ_G0021668.1 mouse_genomes_project 15 29418853 29468855 - MGP_LPJ_P0040558 Ankrd33b protein_coding protein_coding MGP_LPJ_T0013083.1 MGP_LPJ_G0011174.1 mouse_genomes_project 15 76096191 76097467 - processed_pseudogene processed_pseudogene MGP_LPJ_T0040617.1 MGP_LPJ_G0021692.1 mouse_genomes_project 15 34200335 34209789 - MGP_LPJ_P0040617 Cox6c protein_coding nonsense_mediated_decay MGP_LPJ_T0040618.1 MGP_LPJ_G0021692.1 mouse_genomes_project 15 34206453 34212687 - MGP_LPJ_P0040618 Cox6c protein_coding protein_coding MGP_LPJ_T0040619.1 MGP_LPJ_G0021692.1 mouse_genomes_project 15 34206457 34212086 - MGP_LPJ_P0040619 Cox6c protein_coding protein_coding MGP_LPJ_T0040620.1 MGP_LPJ_G0021692.1 mouse_genomes_project 15 34206460 34212648 - Cox6c protein_coding retained_intron MGP_LPJ_T0040621.1 MGP_LPJ_G0021692.1 mouse_genomes_project 15 34209844 34212450 - MGP_LPJ_P0040621 Cox6c protein_coding protein_coding MGP_LPJ_T0010066.1 MGP_LPJ_G0008184.1 mouse_genomes_project 15 76404922 76404990 + Mir6953 miRNA miRNA MGP_LPJ_T0041041.1 MGP_LPJ_G0021837.1 mouse_genomes_project 15 74584584 74588514 - MGP_LPJ_P0041041 Slurp2 protein_coding protein_coding MGP_LPJ_T0010081.1 MGP_LPJ_G0008199.1 mouse_genomes_project 15 82837164 82837233 + Mir33 miRNA miRNA MGP_LPJ_T0040887.1 MGP_LPJ_G0021796.1 mouse_genomes_project 15 63120676 63171427 - MGP_LPJ_P0040887 Gsdmc3 protein_coding protein_coding MGP_LPJ_T0040775.1 MGP_LPJ_G0021749.1 mouse_genomes_project 15 52719357 52721038 + MGP_LPJ_P0040775 Gm7489 protein_coding protein_coding MGP_LPJ_T0011415.1 MGP_LPJ_G0009533.1 mouse_genomes_project 15 104824113 104824295 + Gm27406 misc_RNA misc_RNA MGP_LPJ_T0042558.1 MGP_LPJ_G0022305.1 mouse_genomes_project 15 104520347 104533879 + MGP_LPJ_P0042558 Zfp740 protein_coding protein_coding MGP_LPJ_T0042559.1 MGP_LPJ_G0022305.1 mouse_genomes_project 15 104520358 104533872 + MGP_LPJ_P0042559 Zfp740 protein_coding protein_coding MGP_LPJ_T0042560.1 MGP_LPJ_G0022305.1 mouse_genomes_project 15 104520390 104525036 + MGP_LPJ_P0042560 Zfp740 protein_coding protein_coding MGP_LPJ_T0042561.1 MGP_LPJ_G0022305.1 mouse_genomes_project 15 104520408 104525558 + MGP_LPJ_P0042561 Zfp740 protein_coding protein_coding MGP_LPJ_T0042562.1 MGP_LPJ_G0022305.1 mouse_genomes_project 15 104521308 104533880 + MGP_LPJ_P0042562 Zfp740 protein_coding protein_coding MGP_LPJ_T0042563.1 MGP_LPJ_G0022305.1 mouse_genomes_project 15 104521445 104525472 + MGP_LPJ_P0042563 Zfp740 protein_coding protein_coding MGP_LPJ_T0042564.1 MGP_LPJ_G0022305.1 mouse_genomes_project 15 104521479 104525460 + MGP_LPJ_P0042564 Zfp740 protein_coding protein_coding MGP_LPJ_T0042565.1 MGP_LPJ_G0022305.1 mouse_genomes_project 15 104524311 104525342 + Zfp740 protein_coding retained_intron MGP_LPJ_T0042566.1 MGP_LPJ_G0022305.1 mouse_genomes_project 15 104524955 104533875 + Zfp740 protein_coding retained_intron MGP_LPJ_T0040784.1 MGP_LPJ_G0021755.1 mouse_genomes_project 15 53878777 53940292 - MGP_LPJ_P0040784 Taf2 protein_coding protein_coding MGP_LPJ_T0040777.1 MGP_LPJ_G0021751.1 mouse_genomes_project 15 53268908 53319042 + MGP_LPJ_P0040777 Colec10 protein_coding protein_coding MGP_LPJ_T0013065.1 MGP_LPJ_G0011156.1 mouse_genomes_project 15 38959455 38959950 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099102.1 MGP_LPJ_G0037365.1 mouse_genomes_project 15 18768792 18768899 + Gm25101 snRNA snRNA MGP_LPJ_T0041268.1 MGP_LPJ_G0021896.1 mouse_genomes_project 15 76654331 76677639 + MGP_LPJ_P0041268 Hsf1 protein_coding protein_coding MGP_LPJ_T0041269.1 MGP_LPJ_G0021896.1 mouse_genomes_project 15 76654487 76677289 + MGP_LPJ_P0041269 Hsf1 protein_coding unknown_likely_coding MGP_LPJ_T0003609.1 MGP_LPJ_G0003274.1 mouse_genomes_project 15 35687516 35688810 + Gm28221 antisense antisense MGP_LPJ_T0042522.1 MGP_LPJ_G0022275.1 mouse_genomes_project 15 103637633 103645202 - MGP_LPJ_P0042522 Krt87 protein_coding protein_coding MGP_LPJ_T0042416.1 MGP_LPJ_G0022247.1 mouse_genomes_project 15 102289154 102331811 + MGP_LPJ_P0042416 Atf1 protein_coding protein_coding MGP_LPJ_T0042417.1 MGP_LPJ_G0022247.1 mouse_genomes_project 15 102289188 102320866 + MGP_LPJ_P0042417 Atf1 protein_coding protein_coding MGP_LPJ_T0042418.1 MGP_LPJ_G0022247.1 mouse_genomes_project 15 102292107 102298277 + MGP_LPJ_P0042418 Atf1 protein_coding protein_coding MGP_LPJ_T0042419.1 MGP_LPJ_G0022247.1 mouse_genomes_project 15 102297621 102318411 + MGP_LPJ_P0042419 Atf1 protein_coding protein_coding MGP_LPJ_T0042420.1 MGP_LPJ_G0022247.1 mouse_genomes_project 15 102297633 102298476 + Atf1 protein_coding retained_intron MGP_LPJ_T0042421.1 MGP_LPJ_G0022247.1 mouse_genomes_project 15 102297660 102320701 + MGP_LPJ_P0042421 Atf1 protein_coding protein_coding MGP_LPJ_T0042422.1 MGP_LPJ_G0022247.1 mouse_genomes_project 15 102298195 102330664 + MGP_LPJ_P0042422 Atf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0042423.1 MGP_LPJ_G0022247.1 mouse_genomes_project 15 102298213 102330707 + Atf1 protein_coding processed_transcript MGP_LPJ_T0042424.1 MGP_LPJ_G0022247.1 mouse_genomes_project 15 102320531 102330496 + MGP_LPJ_P0042424 Atf1 protein_coding protein_coding MGP_LPJ_T0011401.1 MGP_LPJ_G0009519.1 mouse_genomes_project 15 34310369 34310624 + Gm25372 misc_RNA misc_RNA MGP_LPJ_T0040850.1 MGP_LPJ_G0021777.1 mouse_genomes_project 15 57461356 57505242 + MGP_LPJ_P0040850 Fam91a1 protein_coding protein_coding MGP_LPJ_T0042537.1 MGP_LPJ_G0022289.1 mouse_genomes_project 15 104077255 104086291 - MGP_LPJ_P0042537 Krt73 protein_coding protein_coding MGP_LPJ_T0040706.1 MGP_LPJ_G0021721.1 mouse_genomes_project 15 38033970 38128480 - MGP_LPJ_P0040706 Dpys protein_coding protein_coding MGP_LPJ_T0040707.1 MGP_LPJ_G0021721.1 mouse_genomes_project 15 38048267 38128483 - MGP_LPJ_P0040707 Dpys protein_coding protein_coding MGP_LPJ_T0040708.1 MGP_LPJ_G0021721.1 mouse_genomes_project 15 38048274 38058664 - MGP_LPJ_P0040708 Dpys protein_coding protein_coding MGP_LPJ_T0040709.1 MGP_LPJ_G0021721.1 mouse_genomes_project 15 38127594 38128483 - Dpys protein_coding processed_transcript MGP_LPJ_T0099101.1 MGP_LPJ_G0037364.1 mouse_genomes_project 15 15518377 15518484 - Gm24713 snRNA snRNA MGP_LPJ_T0100408.1 MGP_LPJ_G0038671.1 mouse_genomes_project 15 100413022 100413159 - Snora2b snoRNA snoRNA MGP_LPJ_T0040695.1 MGP_LPJ_G0021716.1 mouse_genomes_project 15 37365191 37375497 + MGP_LPJ_P0040695 Cthrc1 protein_coding protein_coding MGP_LPJ_T0040696.1 MGP_LPJ_G0021716.1 mouse_genomes_project 15 37365337 37369878 + Cthrc1 protein_coding processed_transcript MGP_LPJ_T0040697.1 MGP_LPJ_G0021716.1 mouse_genomes_project 15 37372360 37375499 + Cthrc1 protein_coding retained_intron MGP_LPJ_T0006817.1 MGP_LPJ_G0005623.1 mouse_genomes_project 15 97814286 97977864 - 2610037D02Rik lincRNA lincRNA MGP_LPJ_T0006821.1 MGP_LPJ_G0005623.1 mouse_genomes_project 15 97975754 97978751 - 2610037D02Rik lincRNA lincRNA MGP_LPJ_T0041615.1 MGP_LPJ_G0021997.1 mouse_genomes_project 15 80762813 80765170 + MGP_LPJ_P0041615 Atf4 protein_coding protein_coding MGP_LPJ_T0010111.1 MGP_LPJ_G0008229.1 mouse_genomes_project 15 103825971 103826100 + Gm44460 miRNA miRNA MGP_LPJ_T0010092.1 MGP_LPJ_G0008210.1 mouse_genomes_project 15 83766917 83766996 - Mir3080 miRNA miRNA MGP_LPJ_T0040615.1 MGP_LPJ_G0021690.1 mouse_genomes_project 15 33555305 33562510 + MGP_LPJ_P0040615 Osr2 protein_coding protein_coding MGP_LPJ_T0042073.1 MGP_LPJ_G0022136.1 mouse_genomes_project 15 90782962 90784242 + MGP_LPJ_P0042073 C730034F03Rik protein_coding protein_coding MGP_LPJ_T0013064.1 MGP_LPJ_G0011155.1 mouse_genomes_project 15 37468888 37469816 + processed_pseudogene processed_pseudogene MGP_LPJ_T0042189.1 MGP_LPJ_G0022173.1 mouse_genomes_project 15 98733597 98794674 - MGP_LPJ_P0042189 Slc38a4 protein_coding protein_coding MGP_LPJ_T0042190.1 MGP_LPJ_G0022173.1 mouse_genomes_project 15 98735539 98759094 - MGP_LPJ_P0042190 Slc38a4 protein_coding protein_coding MGP_LPJ_T0003621.1 MGP_LPJ_G0003285.1 mouse_genomes_project 15 74626410 74647941 + Gm17189 antisense antisense MGP_LPJ_T0041571.1 MGP_LPJ_G0021987.1 mouse_genomes_project 15 80274843 80320214 - MGP_LPJ_P0041571 Npcd protein_coding protein_coding MGP_LPJ_T0041572.1 MGP_LPJ_G0021987.1 mouse_genomes_project 15 80274843 80320214 - MGP_LPJ_P0041572 Npcd protein_coding protein_coding MGP_LPJ_T0013086.1 MGP_LPJ_G0011177.1 mouse_genomes_project 15 77877030 77877594 + processed_pseudogene processed_pseudogene MGP_LPJ_T0042639.1 MGP_LPJ_G0022323.1 mouse_genomes_project 15 104869161 104965655 - MGP_LPJ_P0042639 protein_coding protein_coding MGP_LPJ_T0042640.1 MGP_LPJ_G0022323.1 mouse_genomes_project 15 104871653 104966032 - MGP_LPJ_P0042640 protein_coding protein_coding MGP_LPJ_T0042641.1 MGP_LPJ_G0022323.1 mouse_genomes_project 15 104871653 104872043 - MGP_LPJ_P0042641 protein_coding protein_coding MGP_LPJ_T0042642.1 MGP_LPJ_G0022323.1 mouse_genomes_project 15 104876589 104966021 - MGP_LPJ_P0042642 protein_coding protein_coding MGP_LPJ_T0042643.1 MGP_LPJ_G0022323.1 mouse_genomes_project 15 104879664 104966035 - MGP_LPJ_P0042643 protein_coding protein_coding MGP_LPJ_T0042644.1 MGP_LPJ_G0022323.1 mouse_genomes_project 15 104880344 104965670 - MGP_LPJ_P0042644 protein_coding protein_coding MGP_LPJ_T0042645.1 MGP_LPJ_G0022323.1 mouse_genomes_project 15 104889599 104966020 - protein_coding retained_intron MGP_LPJ_T0042646.1 MGP_LPJ_G0022323.1 mouse_genomes_project 15 104891663 104966046 - MGP_LPJ_P0042646 protein_coding nonsense_mediated_decay MGP_LPJ_T0042647.1 MGP_LPJ_G0022323.1 mouse_genomes_project 15 104891715 104965504 - MGP_LPJ_P0042647 protein_coding protein_coding MGP_LPJ_T0042648.1 MGP_LPJ_G0022323.1 mouse_genomes_project 15 104893580 104965649 - MGP_LPJ_P0042648 protein_coding protein_coding MGP_LPJ_T0042649.1 MGP_LPJ_G0022323.1 mouse_genomes_project 15 104893580 104966028 - MGP_LPJ_P0042649 protein_coding protein_coding MGP_LPJ_T0042650.1 MGP_LPJ_G0022323.1 mouse_genomes_project 15 104904646 104965652 - protein_coding retained_intron MGP_LPJ_T0042651.1 MGP_LPJ_G0022323.1 mouse_genomes_project 15 104937535 104966046 - protein_coding retained_intron MGP_LPJ_T0013073.1 MGP_LPJ_G0011164.1 mouse_genomes_project 15 53614636 53615618 - processed_pseudogene processed_pseudogene MGP_LPJ_T0040973.1 MGP_LPJ_G0021816.1 mouse_genomes_project 15 71099489 71408625 - MGP_LPJ_P0040973 Fam135b protein_coding protein_coding MGP_LPJ_T0041026.1 MGP_LPJ_G0021830.1 mouse_genomes_project 15 74448563 74478530 - MGP_LPJ_P0041026 Mroh4 protein_coding protein_coding MGP_LPJ_T0041027.1 MGP_LPJ_G0021830.1 mouse_genomes_project 15 74448563 74477026 - MGP_LPJ_P0041027 Mroh4 protein_coding protein_coding MGP_LPJ_T0041028.1 MGP_LPJ_G0021830.1 mouse_genomes_project 15 74448937 74454547 - MGP_LPJ_P0041028 Mroh4 protein_coding protein_coding MGP_LPJ_T0041029.1 MGP_LPJ_G0021830.1 mouse_genomes_project 15 74448949 74450763 - Mroh4 protein_coding retained_intron MGP_LPJ_T0041030.1 MGP_LPJ_G0021830.1 mouse_genomes_project 15 74458672 74470581 - MGP_LPJ_P0041030 Mroh4 protein_coding protein_coding MGP_LPJ_T0041031.1 MGP_LPJ_G0021830.1 mouse_genomes_project 15 74473816 74478475 - Mroh4 protein_coding processed_transcript MGP_LPJ_T0041830.1 MGP_LPJ_G0022063.1 mouse_genomes_project 15 84247013 84306141 - MGP_LPJ_P0041830 Pacsin2 protein_coding protein_coding MGP_LPJ_T0041831.1 MGP_LPJ_G0022063.1 mouse_genomes_project 15 84247013 84340869 - MGP_LPJ_P0041831 Pacsin2 protein_coding protein_coding MGP_LPJ_T0041832.1 MGP_LPJ_G0022063.1 mouse_genomes_project 15 84249610 84340833 - MGP_LPJ_P0041832 Pacsin2 protein_coding protein_coding MGP_LPJ_T0013055.1 MGP_LPJ_G0011146.1 mouse_genomes_project 15 20649379 20651134 + processed_pseudogene processed_pseudogene MGP_LPJ_T0042354.1 MGP_LPJ_G0022228.1 mouse_genomes_project 15 101298055 101351308 - MGP_LPJ_P0042354 Fmnl3 protein_coding protein_coding MGP_LPJ_T0042355.1 MGP_LPJ_G0022228.1 mouse_genomes_project 15 101298055 101351275 - MGP_LPJ_P0042355 Fmnl3 protein_coding protein_coding MGP_LPJ_T0042356.1 MGP_LPJ_G0022228.1 mouse_genomes_project 15 101298055 101351275 - MGP_LPJ_P0042356 Fmnl3 protein_coding protein_coding MGP_LPJ_T0042357.1 MGP_LPJ_G0022228.1 mouse_genomes_project 15 101305214 101306482 - Fmnl3 protein_coding retained_intron MGP_LPJ_T0042358.1 MGP_LPJ_G0022228.1 mouse_genomes_project 15 101308674 101316558 - Fmnl3 protein_coding processed_transcript MGP_LPJ_T0041705.1 MGP_LPJ_G0022019.1 mouse_genomes_project 15 82352531 82408189 + MGP_LPJ_P0041705 Zc3h7b protein_coding protein_coding MGP_LPJ_T0041739.1 MGP_LPJ_G0022029.1 mouse_genomes_project 15 82613886 82637517 - MGP_LPJ_P0041739 Desi1 protein_coding nonsense_mediated_decay MGP_LPJ_T0041740.1 MGP_LPJ_G0022029.1 mouse_genomes_project 15 82613886 82637527 - MGP_LPJ_P0041740 Desi1 protein_coding protein_coding MGP_LPJ_T0041741.1 MGP_LPJ_G0022029.1 mouse_genomes_project 15 82615210 82637589 - MGP_LPJ_P0041741 Desi1 protein_coding nonsense_mediated_decay MGP_LPJ_T0041742.1 MGP_LPJ_G0022029.1 mouse_genomes_project 15 82616008 82660764 - Desi1 protein_coding processed_transcript MGP_LPJ_T0041743.1 MGP_LPJ_G0022029.1 mouse_genomes_project 15 82616021 82637375 - MGP_LPJ_P0041743 Desi1 protein_coding nonsense_mediated_decay MGP_LPJ_T0041744.1 MGP_LPJ_G0022029.1 mouse_genomes_project 15 82616084 82637401 - MGP_LPJ_P0041744 Desi1 protein_coding nonsense_mediated_decay MGP_LPJ_T0042459.1 MGP_LPJ_G0022261.1 mouse_genomes_project 15 102780129 102807758 - MGP_LPJ_P0042459 Bin2 protein_coding protein_coding MGP_LPJ_T0042460.1 MGP_LPJ_G0022261.1 mouse_genomes_project 15 102780135 102807710 - MGP_LPJ_P0042460 Bin2 protein_coding protein_coding MGP_LPJ_T0042461.1 MGP_LPJ_G0022261.1 mouse_genomes_project 15 102780135 102807732 - MGP_LPJ_P0042461 Bin2 protein_coding protein_coding MGP_LPJ_T0042462.1 MGP_LPJ_G0022261.1 mouse_genomes_project 15 102784532 102807710 - MGP_LPJ_P0042462 Bin2 protein_coding protein_coding MGP_LPJ_T0042463.1 MGP_LPJ_G0022261.1 mouse_genomes_project 15 102784628 102807730 - MGP_LPJ_P0042463 Bin2 protein_coding protein_coding MGP_LPJ_T0042464.1 MGP_LPJ_G0022261.1 mouse_genomes_project 15 102784670 102789518 - Bin2 protein_coding processed_transcript MGP_LPJ_T0042465.1 MGP_LPJ_G0022261.1 mouse_genomes_project 15 102787090 102788597 - Bin2 protein_coding retained_intron MGP_LPJ_T0041826.1 MGP_LPJ_G0022061.1 mouse_genomes_project 15 84072293 84099324 - MGP_LPJ_P0041826 A4galt protein_coding protein_coding MGP_LPJ_T0041827.1 MGP_LPJ_G0022061.1 mouse_genomes_project 15 84072293 84099281 - MGP_LPJ_P0041827 A4galt protein_coding protein_coding MGP_LPJ_T0042441.1 MGP_LPJ_G0022254.1 mouse_genomes_project 15 102555682 102561000 + MGP_LPJ_P0042441 Gm5475 protein_coding protein_coding MGP_LPJ_T0042442.1 MGP_LPJ_G0022254.1 mouse_genomes_project 15 102556728 102561675 + MGP_LPJ_P0042442 Gm5475 protein_coding protein_coding MGP_LPJ_T0101898.1 MGP_LPJ_G0039935.1 mouse_genomes_project 15 75329109 75331840 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013044.1 MGP_LPJ_G0011135.1 mouse_genomes_project 15 594860 595844 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098501.1 MGP_LPJ_G0036778.1 mouse_genomes_project 15 96719722 96790017 - 1700129L04Rik sense_intronic sense_intronic MGP_LPJ_T0098502.1 MGP_LPJ_G0036778.1 mouse_genomes_project 15 96719796 96775529 - 1700129L04Rik sense_intronic sense_intronic MGP_LPJ_T0042704.1 MGP_LPJ_G0022344.1 mouse_genomes_project 15 105854217 105864927 - MGP_LPJ_P0042704 BC048502 protein_coding protein_coding MGP_LPJ_T0040368.1 MGP_LPJ_G0021608.1 mouse_genomes_project 15 4832353 5065629 - MGP_LPJ_P0040368 Wdr70 protein_coding protein_coding MGP_LPJ_T0041356.1 MGP_LPJ_G0021921.1 mouse_genomes_project 15 77213388 77220684 - MGP_LPJ_P0041356 Mb protein_coding protein_coding MGP_LPJ_T0041357.1 MGP_LPJ_G0021921.1 mouse_genomes_project 15 77213388 77220624 - MGP_LPJ_P0041357 Mb protein_coding protein_coding MGP_LPJ_T0041358.1 MGP_LPJ_G0021921.1 mouse_genomes_project 15 77213388 77257098 - MGP_LPJ_P0041358 Mb protein_coding protein_coding MGP_LPJ_T0098176.1 MGP_LPJ_G0036457.1 mouse_genomes_project 15 37439881 37439989 - n-R5s39 rRNA rRNA MGP_LPJ_T0100395.1 MGP_LPJ_G0038658.1 mouse_genomes_project 15 62048300 62048434 + Gm22521 snoRNA snoRNA MGP_LPJ_T0006832.1 MGP_LPJ_G0005634.1 mouse_genomes_project 15 105471994 105478774 - Gm28876 lincRNA lincRNA MGP_LPJ_T0041270.1 MGP_LPJ_G0021897.1 mouse_genomes_project 15 76678683 76688596 - MGP_LPJ_P0041270 Dgat1 protein_coding protein_coding MGP_LPJ_T0041271.1 MGP_LPJ_G0021897.1 mouse_genomes_project 15 76678685 76679849 - Dgat1 protein_coding retained_intron MGP_LPJ_T0041272.1 MGP_LPJ_G0021897.1 mouse_genomes_project 15 76678736 76679983 - Dgat1 protein_coding retained_intron MGP_LPJ_T0041273.1 MGP_LPJ_G0021897.1 mouse_genomes_project 15 76679192 76680614 - MGP_LPJ_P0041273 Dgat1 protein_coding nonsense_mediated_decay MGP_LPJ_T0041274.1 MGP_LPJ_G0021897.1 mouse_genomes_project 15 76679944 76683274 - MGP_LPJ_P0041274 Dgat1 protein_coding protein_coding MGP_LPJ_T0041275.1 MGP_LPJ_G0021897.1 mouse_genomes_project 15 76680259 76680991 - Dgat1 protein_coding retained_intron MGP_LPJ_T0041276.1 MGP_LPJ_G0021897.1 mouse_genomes_project 15 76680570 76681864 - Dgat1 protein_coding retained_intron MGP_LPJ_T0041277.1 MGP_LPJ_G0021897.1 mouse_genomes_project 15 76680620 76681332 - Dgat1 protein_coding retained_intron MGP_LPJ_T0041812.1 MGP_LPJ_G0022058.1 mouse_genomes_project 15 83952048 83961282 - MGP_LPJ_P0041812 Rrp7a protein_coding protein_coding MGP_LPJ_T0041813.1 MGP_LPJ_G0022058.1 mouse_genomes_project 15 83954461 83956112 - MGP_LPJ_P0041813 Rrp7a protein_coding nonsense_mediated_decay MGP_LPJ_T0041814.1 MGP_LPJ_G0022058.1 mouse_genomes_project 15 83955721 83956840 - Rrp7a protein_coding retained_intron MGP_LPJ_T0041815.1 MGP_LPJ_G0022058.1 mouse_genomes_project 15 83957746 83960634 - MGP_LPJ_P0041815 Rrp7a protein_coding protein_coding MGP_LPJ_T0041816.1 MGP_LPJ_G0022058.1 mouse_genomes_project 15 83957772 83961232 - MGP_LPJ_P0041816 Rrp7a protein_coding nonsense_mediated_decay MGP_LPJ_T0041554.1 MGP_LPJ_G0021983.1 mouse_genomes_project 15 80178480 80204276 + MGP_LPJ_P0041554 Gtpbp1 protein_coding protein_coding MGP_LPJ_T0040518.1 MGP_LPJ_G0021653.1 mouse_genomes_project 15 23269215 23269868 + MGP_LPJ_P0040518 Gm5468 protein_coding protein_coding MGP_LPJ_T0042676.1 MGP_LPJ_G0022336.1 mouse_genomes_project 15 105577749 105639209 - MGP_LPJ_P0042676 Cbx5 protein_coding protein_coding MGP_LPJ_T0042677.1 MGP_LPJ_G0022336.1 mouse_genomes_project 15 105582892 105602822 - MGP_LPJ_P0042677 Cbx5 protein_coding protein_coding MGP_LPJ_T0042678.1 MGP_LPJ_G0022336.1 mouse_genomes_project 15 105585460 105602775 - MGP_LPJ_P0042678 Cbx5 protein_coding protein_coding MGP_LPJ_T0042679.1 MGP_LPJ_G0022336.1 mouse_genomes_project 15 105600549 105602836 - MGP_LPJ_P0042679 Cbx5 protein_coding protein_coding MGP_LPJ_T0041785.1 MGP_LPJ_G0022048.1 mouse_genomes_project 15 83135681 83140132 + MGP_LPJ_P0041785 Cyp2d9 protein_coding protein_coding MGP_LPJ_T0099138.1 MGP_LPJ_G0037401.1 mouse_genomes_project 15 86382249 86382441 - Gm23517 snRNA snRNA MGP_LPJ_T0013099.1 MGP_LPJ_G0011190.1 mouse_genomes_project 15 93289353 93289890 + processed_pseudogene processed_pseudogene MGP_LPJ_T0041459.1 MGP_LPJ_G0021959.1 mouse_genomes_project 15 79383335 79405558 + Triobp protein_coding processed_transcript MGP_LPJ_T0041460.1 MGP_LPJ_G0021959.1 mouse_genomes_project 15 79383335 79444754 + MGP_LPJ_P0041460 Triobp protein_coding protein_coding MGP_LPJ_T0041461.1 MGP_LPJ_G0021959.1 mouse_genomes_project 15 79383335 79445056 + MGP_LPJ_P0041461 Triobp protein_coding protein_coding MGP_LPJ_T0041462.1 MGP_LPJ_G0021959.1 mouse_genomes_project 15 79383856 79389051 + Triobp protein_coding retained_intron MGP_LPJ_T0041463.1 MGP_LPJ_G0021959.1 mouse_genomes_project 15 79422203 79445053 + MGP_LPJ_P0041463 Triobp protein_coding protein_coding MGP_LPJ_T0041464.1 MGP_LPJ_G0021959.1 mouse_genomes_project 15 79422215 79445051 + MGP_LPJ_P0041464 Triobp protein_coding protein_coding MGP_LPJ_T0041465.1 MGP_LPJ_G0021959.1 mouse_genomes_project 15 79422237 79434069 + MGP_LPJ_P0041465 Triobp protein_coding protein_coding MGP_LPJ_T0041466.1 MGP_LPJ_G0021959.1 mouse_genomes_project 15 79422885 79430649 + MGP_LPJ_P0041466 Triobp protein_coding protein_coding MGP_LPJ_T0041467.1 MGP_LPJ_G0021959.1 mouse_genomes_project 15 79441390 79443906 + Triobp protein_coding processed_transcript MGP_LPJ_T0040547.1 MGP_LPJ_G0021664.1 mouse_genomes_project 15 26175923 26450858 + MGP_LPJ_P0040547 Dnah5 protein_coding protein_coding MGP_LPJ_T0013093.1 MGP_LPJ_G0011184.1 mouse_genomes_project 15 86127611 86128029 + processed_pseudogene processed_pseudogene MGP_LPJ_T0042249.1 MGP_LPJ_G0022186.1 mouse_genomes_project 15 99939750 99970792 - MGP_LPJ_P0042249 Asb8 protein_coding protein_coding MGP_LPJ_T0042250.1 MGP_LPJ_G0022186.1 mouse_genomes_project 15 99940827 99950877 - MGP_LPJ_P0042250 Asb8 protein_coding protein_coding MGP_LPJ_T0042251.1 MGP_LPJ_G0022186.1 mouse_genomes_project 15 99940827 99950830 - MGP_LPJ_P0042251 Asb8 protein_coding protein_coding MGP_LPJ_T0042252.1 MGP_LPJ_G0022186.1 mouse_genomes_project 15 99940827 99970727 - MGP_LPJ_P0042252 Asb8 protein_coding protein_coding MGP_LPJ_T0006831.1 MGP_LPJ_G0005633.1 mouse_genomes_project 15 105314863 105318532 - Hotair lincRNA lincRNA MGP_LPJ_T0042515.1 MGP_LPJ_G0022273.1 mouse_genomes_project 15 103547679 103569663 - MGP_LPJ_P0042515 Krt80 protein_coding protein_coding MGP_LPJ_T0041509.1 MGP_LPJ_G0021970.1 mouse_genomes_project 15 79707947 79735028 - MGP_LPJ_P0041509 Baiap2l2 protein_coding protein_coding MGP_LPJ_T0041510.1 MGP_LPJ_G0021970.1 mouse_genomes_project 15 79707948 79734933 - MGP_LPJ_P0041510 Baiap2l2 protein_coding nonsense_mediated_decay MGP_LPJ_T0041511.1 MGP_LPJ_G0021970.1 mouse_genomes_project 15 79708084 79709085 - Baiap2l2 protein_coding processed_transcript MGP_LPJ_T0041512.1 MGP_LPJ_G0021970.1 mouse_genomes_project 15 79709447 79711022 - Baiap2l2 protein_coding processed_transcript MGP_LPJ_T0041513.1 MGP_LPJ_G0021970.1 mouse_genomes_project 15 79719893 79734984 - MGP_LPJ_P0041513 Baiap2l2 protein_coding protein_coding MGP_LPJ_T0003629.1 MGP_LPJ_G0003289.1 mouse_genomes_project 15 79882571 79888233 + Gm16059 antisense antisense MGP_LPJ_T0098701.1 MGP_LPJ_G0036968.1 mouse_genomes_project 15 57839673 57841163 - Gm20712 sense_overlapping sense_overlapping MGP_LPJ_T0006825.1 MGP_LPJ_G0005628.1 mouse_genomes_project 15 102749672 102750645 - C330013E15Rik lincRNA lincRNA MGP_LPJ_T0041335.1 MGP_LPJ_G0021913.1 mouse_genomes_project 15 76898244 76905235 - MGP_LPJ_P0041335 Lrrc24 protein_coding protein_coding MGP_LPJ_T0041336.1 MGP_LPJ_G0021913.1 mouse_genomes_project 15 76899175 76901384 - Lrrc24 protein_coding retained_intron MGP_LPJ_T0041337.1 MGP_LPJ_G0021913.1 mouse_genomes_project 15 76902669 76905221 - Lrrc24 protein_coding retained_intron MGP_LPJ_T0041338.1 MGP_LPJ_G0021913.1 mouse_genomes_project 15 76904523 76906898 - MGP_LPJ_P0041338 Lrrc24 protein_coding protein_coding MGP_LPJ_T0041526.1 MGP_LPJ_G0021972.1 mouse_genomes_project 15 79799153 79810675 + MGP_LPJ_P0041526 Maff protein_coding protein_coding MGP_LPJ_T0041527.1 MGP_LPJ_G0021972.1 mouse_genomes_project 15 79799673 79810675 + MGP_LPJ_P0041527 Maff protein_coding protein_coding MGP_LPJ_T0041738.1 MGP_LPJ_G0022028.1 mouse_genomes_project 15 82609198 82649487 + MGP_LPJ_P0041738 Xrcc6 protein_coding protein_coding MGP_LPJ_T0041745.1 MGP_LPJ_G0022028.1 mouse_genomes_project 15 82637765 82666937 + MGP_LPJ_P0041745 Xrcc6 protein_coding protein_coding MGP_LPJ_T0041746.1 MGP_LPJ_G0022028.1 mouse_genomes_project 15 82637827 82652550 + MGP_LPJ_P0041746 Xrcc6 protein_coding protein_coding MGP_LPJ_T0041747.1 MGP_LPJ_G0022028.1 mouse_genomes_project 15 82637878 82652599 + MGP_LPJ_P0041747 Xrcc6 protein_coding protein_coding MGP_LPJ_T0041748.1 MGP_LPJ_G0022028.1 mouse_genomes_project 15 82649195 82649843 + Xrcc6 protein_coding retained_intron MGP_LPJ_T0041749.1 MGP_LPJ_G0022028.1 mouse_genomes_project 15 82649888 82654669 + Xrcc6 protein_coding retained_intron MGP_LPJ_T0041750.1 MGP_LPJ_G0022028.1 mouse_genomes_project 15 82652301 82656494 + Xrcc6 protein_coding retained_intron MGP_LPJ_T0041751.1 MGP_LPJ_G0022028.1 mouse_genomes_project 15 82654976 82666646 + Xrcc6 protein_coding processed_transcript MGP_LPJ_T0041752.1 MGP_LPJ_G0022028.1 mouse_genomes_project 15 82655961 82664348 + Xrcc6 protein_coding retained_intron MGP_LPJ_T0041323.1 MGP_LPJ_G0021910.1 mouse_genomes_project 15 76884744 76887442 + MGP_LPJ_P0041323 Mfsd3 protein_coding protein_coding MGP_LPJ_T0042373.1 MGP_LPJ_G0022232.1 mouse_genomes_project 15 101487032 101520100 - MGP_LPJ_P0042373 Faim2 protein_coding protein_coding MGP_LPJ_T0040592.1 MGP_LPJ_G0021683.1 mouse_genomes_project 15 32645454 32647861 - Rpl30 protein_coding processed_transcript MGP_LPJ_T0040593.1 MGP_LPJ_G0021683.1 mouse_genomes_project 15 32645454 32648113 - Rpl30 protein_coding retained_intron MGP_LPJ_T0040594.1 MGP_LPJ_G0021683.1 mouse_genomes_project 15 32645454 32648583 - MGP_LPJ_P0040594 Rpl30 protein_coding protein_coding MGP_LPJ_T0040595.1 MGP_LPJ_G0021683.1 mouse_genomes_project 15 32645459 32648175 - MGP_LPJ_P0040595 Rpl30 protein_coding protein_coding MGP_LPJ_T0040596.1 MGP_LPJ_G0021683.1 mouse_genomes_project 15 32645524 32646615 - Rpl30 protein_coding retained_intron MGP_LPJ_T0040597.1 MGP_LPJ_G0021683.1 mouse_genomes_project 15 32647473 32648212 - Rpl30 protein_coding processed_transcript MGP_LPJ_T0017398.1 MGP_LPJ_G0015211.1 mouse_genomes_project 15 59988215 59994573 + 9930014A18Rik processed_transcript antisense MGP_LPJ_T0017399.1 MGP_LPJ_G0015211.1 mouse_genomes_project 15 59988895 59991552 + 9930014A18Rik processed_transcript TEC MGP_LPJ_T0017400.1 MGP_LPJ_G0015211.1 mouse_genomes_project 15 59989344 59989882 + 9930014A18Rik processed_transcript antisense MGP_LPJ_T0017401.1 MGP_LPJ_G0015211.1 mouse_genomes_project 15 59990283 59997716 + 9930014A18Rik processed_transcript antisense MGP_LPJ_T0042039.1 MGP_LPJ_G0022127.1 mouse_genomes_project 15 90699858 90704514 - MGP_LPJ_P0042039 Lmf2 protein_coding protein_coding MGP_LPJ_T0013078.1 MGP_LPJ_G0011169.1 mouse_genomes_project 15 64395532 64395844 + processed_pseudogene processed_pseudogene MGP_LPJ_T0040733.1 MGP_LPJ_G0021735.1 mouse_genomes_project 15 42843987 42988743 + MGP_LPJ_P0040733 Pkhd1l1 protein_coding unknown_likely_coding MGP_LPJ_T0040734.1 MGP_LPJ_G0021735.1 mouse_genomes_project 15 42843987 42982756 + MGP_LPJ_P0040734 Pkhd1l1 protein_coding protein_coding MGP_LPJ_T0040735.1 MGP_LPJ_G0021735.1 mouse_genomes_project 15 42843987 42982762 + MGP_LPJ_P0040735 Pkhd1l1 protein_coding protein_coding MGP_LPJ_T0042527.1 MGP_LPJ_G0022280.1 mouse_genomes_project 15 103790018 103800420 - MGP_LPJ_P0042527 Krt82 protein_coding protein_coding MGP_LPJ_T0040763.1 MGP_LPJ_G0021743.1 mouse_genomes_project 15 50726072 50758432 - MGP_LPJ_P0040763 Rad21 protein_coding protein_coding MGP_LPJ_T0042523.1 MGP_LPJ_G0022276.1 mouse_genomes_project 15 103656768 103662915 + MGP_LPJ_P0042523 Krt88 protein_coding protein_coding MGP_LPJ_T0041311.1 MGP_LPJ_G0021907.1 mouse_genomes_project 15 76851097 76852762 - MGP_LPJ_P0041311 Foxh1 protein_coding protein_coding MGP_LPJ_T0041697.1 MGP_LPJ_G0022017.1 mouse_genomes_project 15 82282292 82297953 - MGP_LPJ_P0041697 Chadl protein_coding nonsense_mediated_decay MGP_LPJ_T0041700.1 MGP_LPJ_G0022017.1 mouse_genomes_project 15 82290155 82301212 - MGP_LPJ_P0041700 Chadl protein_coding protein_coding MGP_LPJ_T0041701.1 MGP_LPJ_G0022017.1 mouse_genomes_project 15 82290171 82298132 - MGP_LPJ_P0041701 Chadl protein_coding nonsense_mediated_decay MGP_LPJ_T0100407.1 MGP_LPJ_G0038670.1 mouse_genomes_project 15 100406435 100406573 - Snora34 snoRNA snoRNA MGP_LPJ_T0040814.1 MGP_LPJ_G0021764.1 mouse_genomes_project 15 56211726 56234359 - MGP_LPJ_P0040814 Slc22a22 protein_coding protein_coding MGP_LPJ_T0040815.1 MGP_LPJ_G0021764.1 mouse_genomes_project 15 56211730 56447508 - MGP_LPJ_P0040815 Slc22a22 protein_coding protein_coding MGP_LPJ_T0040816.1 MGP_LPJ_G0021764.1 mouse_genomes_project 15 56211991 56231895 - MGP_LPJ_P0040816 Slc22a22 protein_coding unknown_likely_coding MGP_LPJ_T0101889.1 MGP_LPJ_G0039926.1 mouse_genomes_project 15 74810458 74811311 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0006800.1 MGP_LPJ_G0005612.1 mouse_genomes_project 15 80227614 80242785 + Gm16576 lincRNA lincRNA MGP_LPJ_T0041441.1 MGP_LPJ_G0021952.1 mouse_genomes_project 15 79199280 79227657 - MGP_LPJ_P0041441 Card10 protein_coding protein_coding MGP_LPJ_T0041442.1 MGP_LPJ_G0021952.1 mouse_genomes_project 15 79200151 79227284 - MGP_LPJ_P0041442 Card10 protein_coding protein_coding MGP_LPJ_T0041443.1 MGP_LPJ_G0021952.1 mouse_genomes_project 15 79210953 79215162 - Card10 protein_coding processed_transcript MGP_LPJ_T0040325.1 MGP_LPJ_G0021600.1 mouse_genomes_project 15 3180587 3336274 + Dab2 protein_coding processed_transcript MGP_LPJ_T0040326.1 MGP_LPJ_G0021600.1 mouse_genomes_project 15 3180587 3341466 + MGP_LPJ_P0040326 Dab2 protein_coding protein_coding MGP_LPJ_T0040327.1 MGP_LPJ_G0021600.1 mouse_genomes_project 15 3180612 3317858 + MGP_LPJ_P0040327 Dab2 protein_coding protein_coding MGP_LPJ_T0040328.1 MGP_LPJ_G0021600.1 mouse_genomes_project 15 3180631 3328656 + MGP_LPJ_P0040328 Dab2 protein_coding protein_coding MGP_LPJ_T0040329.1 MGP_LPJ_G0021600.1 mouse_genomes_project 15 3180667 3227180 + Dab2 protein_coding processed_transcript MGP_LPJ_T0040330.1 MGP_LPJ_G0021600.1 mouse_genomes_project 15 3280968 3341459 + MGP_LPJ_P0040330 Dab2 protein_coding protein_coding MGP_LPJ_T0040331.1 MGP_LPJ_G0021600.1 mouse_genomes_project 15 3281118 3341459 + MGP_LPJ_P0040331 Dab2 protein_coding protein_coding MGP_LPJ_T0040332.1 MGP_LPJ_G0021600.1 mouse_genomes_project 15 3281146 3340382 + MGP_LPJ_P0040332 Dab2 protein_coding protein_coding MGP_LPJ_T0040333.1 MGP_LPJ_G0021600.1 mouse_genomes_project 15 3281147 3340402 + MGP_LPJ_P0040333 Dab2 protein_coding protein_coding MGP_LPJ_T0040334.1 MGP_LPJ_G0021600.1 mouse_genomes_project 15 3281149 3328656 + MGP_LPJ_P0040334 Dab2 protein_coding protein_coding MGP_LPJ_T0040335.1 MGP_LPJ_G0021600.1 mouse_genomes_project 15 3283406 3319213 + MGP_LPJ_P0040335 Dab2 protein_coding protein_coding MGP_LPJ_T0040336.1 MGP_LPJ_G0021600.1 mouse_genomes_project 15 3285732 3320732 + MGP_LPJ_P0040336 Dab2 protein_coding protein_coding MGP_LPJ_T0040337.1 MGP_LPJ_G0021600.1 mouse_genomes_project 15 3323130 3339661 + MGP_LPJ_P0040337 Dab2 protein_coding protein_coding MGP_LPJ_T0040338.1 MGP_LPJ_G0021600.1 mouse_genomes_project 15 3324052 3325915 + Dab2 protein_coding retained_intron MGP_LPJ_T0040912.1 MGP_LPJ_G0021802.1 mouse_genomes_project 15 65157892 65162210 + Efr3a protein_coding processed_transcript MGP_LPJ_T0040913.1 MGP_LPJ_G0021802.1 mouse_genomes_project 15 65157898 65256197 + MGP_LPJ_P0040913 Efr3a protein_coding protein_coding MGP_LPJ_T0040914.1 MGP_LPJ_G0021802.1 mouse_genomes_project 15 65157899 65161693 + Efr3a protein_coding processed_transcript MGP_LPJ_T0040915.1 MGP_LPJ_G0021802.1 mouse_genomes_project 15 65157899 65251632 + MGP_LPJ_P0040915 Efr3a protein_coding protein_coding MGP_LPJ_T0040916.1 MGP_LPJ_G0021802.1 mouse_genomes_project 15 65157900 65205596 + Efr3a protein_coding processed_transcript MGP_LPJ_T0040917.1 MGP_LPJ_G0021802.1 mouse_genomes_project 15 65157904 65201255 + MGP_LPJ_P0040917 Efr3a protein_coding protein_coding MGP_LPJ_T0040918.1 MGP_LPJ_G0021802.1 mouse_genomes_project 15 65157906 65198328 + Efr3a protein_coding retained_intron MGP_LPJ_T0040919.1 MGP_LPJ_G0021802.1 mouse_genomes_project 15 65157906 65195648 + MGP_LPJ_P0040919 Efr3a protein_coding protein_coding MGP_LPJ_T0040920.1 MGP_LPJ_G0021802.1 mouse_genomes_project 15 65158698 65161699 + Efr3a protein_coding processed_transcript MGP_LPJ_T0040921.1 MGP_LPJ_G0021802.1 mouse_genomes_project 15 65229445 65238689 + Efr3a protein_coding retained_intron MGP_LPJ_T0040922.1 MGP_LPJ_G0021802.1 mouse_genomes_project 15 65237358 65239593 + Efr3a protein_coding retained_intron MGP_LPJ_T0040923.1 MGP_LPJ_G0021802.1 mouse_genomes_project 15 65239364 65249041 + Efr3a protein_coding retained_intron MGP_LPJ_T0041616.1 MGP_LPJ_G0021998.1 mouse_genomes_project 15 80768259 80771932 - MGP_LPJ_P0041616 Rps19bp1 protein_coding protein_coding MGP_LPJ_T0040456.1 MGP_LPJ_G0021631.1 mouse_genomes_project 15 8053987 8070172 + MGP_LPJ_P0040456 Amacr protein_coding protein_coding MGP_LPJ_T0042321.1 MGP_LPJ_G0022216.1 mouse_genomes_project 15 100809627 100815127 - MGP_LPJ_P0042321 Dhh protein_coding protein_coding MGP_LPJ_T0041720.1 MGP_LPJ_G0022024.1 mouse_genomes_project 15 82490547 82533117 + MGP_LPJ_P0041720 Aco2 protein_coding protein_coding MGP_LPJ_T0041721.1 MGP_LPJ_G0022024.1 mouse_genomes_project 15 82490722 82507903 + Aco2 protein_coding retained_intron MGP_LPJ_T0041722.1 MGP_LPJ_G0022024.1 mouse_genomes_project 15 82490722 82507904 + Aco2 protein_coding processed_transcript MGP_LPJ_T0041723.1 MGP_LPJ_G0022024.1 mouse_genomes_project 15 82525062 82528493 + Aco2 protein_coding retained_intron MGP_LPJ_T0041724.1 MGP_LPJ_G0022024.1 mouse_genomes_project 15 82525342 82528147 + Aco2 protein_coding retained_intron MGP_LPJ_T0041725.1 MGP_LPJ_G0022024.1 mouse_genomes_project 15 82528272 82531277 + Aco2 protein_coding retained_intron MGP_LPJ_T0041295.1 MGP_LPJ_G0021902.1 mouse_genomes_project 15 76772241 76786591 - MGP_LPJ_P0041295 Cpsf1 protein_coding protein_coding MGP_LPJ_T0042577.1 MGP_LPJ_G0022310.1 mouse_genomes_project 15 104653631 104658894 + Pfdn5 protein_coding retained_intron MGP_LPJ_T0042578.1 MGP_LPJ_G0022310.1 mouse_genomes_project 15 104653652 104658835 + MGP_LPJ_P0042578 Pfdn5 protein_coding protein_coding MGP_LPJ_T0042579.1 MGP_LPJ_G0022310.1 mouse_genomes_project 15 104653652 104658972 + MGP_LPJ_P0042579 Pfdn5 protein_coding nonsense_mediated_decay MGP_LPJ_T0042580.1 MGP_LPJ_G0022310.1 mouse_genomes_project 15 104653652 104658981 + MGP_LPJ_P0042580 Pfdn5 protein_coding protein_coding MGP_LPJ_T0042581.1 MGP_LPJ_G0022310.1 mouse_genomes_project 15 104653854 104658948 + MGP_LPJ_P0042581 Pfdn5 protein_coding protein_coding MGP_LPJ_T0041942.1 MGP_LPJ_G0022100.1 mouse_genomes_project 15 86980764 87127415 - MGP_LPJ_P0041942 Celsr1 protein_coding protein_coding MGP_LPJ_T0041943.1 MGP_LPJ_G0022100.1 mouse_genomes_project 15 86982711 87127408 - MGP_LPJ_P0041943 Celsr1 protein_coding unknown_likely_coding MGP_LPJ_T0006814.1 MGP_LPJ_G0005622.1 mouse_genomes_project 15 97725694 97754712 - D030018L15Rik lincRNA lincRNA MGP_LPJ_T0006815.1 MGP_LPJ_G0005622.1 mouse_genomes_project 15 97725694 97753419 - D030018L15Rik lincRNA lincRNA MGP_LPJ_T0006816.1 MGP_LPJ_G0005622.1 mouse_genomes_project 15 97748622 97754838 - D030018L15Rik lincRNA lincRNA MGP_LPJ_T0041601.1 MGP_LPJ_G0021992.1 mouse_genomes_project 15 80571189 80576865 - protein_coding retained_intron MGP_LPJ_T0041602.1 MGP_LPJ_G0021992.1 mouse_genomes_project 15 80571189 80577635 - protein_coding retained_intron MGP_LPJ_T0041603.1 MGP_LPJ_G0021992.1 mouse_genomes_project 15 80571637 80576017 - MGP_LPJ_P0041603 protein_coding unknown_likely_coding MGP_LPJ_T0041604.1 MGP_LPJ_G0021992.1 mouse_genomes_project 15 80573912 80577615 - MGP_LPJ_P0041604 protein_coding nonsense_mediated_decay MGP_LPJ_T0041605.1 MGP_LPJ_G0021992.1 mouse_genomes_project 15 80574397 80587554 - MGP_LPJ_P0041605 protein_coding protein_coding MGP_LPJ_T0041606.1 MGP_LPJ_G0021992.1 mouse_genomes_project 15 80575484 80577619 - protein_coding retained_intron MGP_LPJ_T0010099.1 MGP_LPJ_G0008217.1 mouse_genomes_project 15 89014555 89014649 - Mir6393 miRNA miRNA MGP_LPJ_T0041495.1 MGP_LPJ_G0021967.1 mouse_genomes_project 15 79602795 79612370 - MGP_LPJ_P0041495 Sox10 protein_coding protein_coding MGP_LPJ_T0040474.1 MGP_LPJ_G0021639.1 mouse_genomes_project 15 9353818 9423348 + MGP_LPJ_P0040474 Mtmr12 protein_coding protein_coding MGP_LPJ_T0040475.1 MGP_LPJ_G0021639.1 mouse_genomes_project 15 9353875 9423102 + MGP_LPJ_P0040475 Mtmr12 protein_coding protein_coding MGP_LPJ_T0040476.1 MGP_LPJ_G0021639.1 mouse_genomes_project 15 9353894 9423227 + MGP_LPJ_P0040476 Mtmr12 protein_coding nonsense_mediated_decay MGP_LPJ_T0040477.1 MGP_LPJ_G0021639.1 mouse_genomes_project 15 9353908 9423345 + MGP_LPJ_P0040477 Mtmr12 protein_coding nonsense_mediated_decay MGP_LPJ_T0040478.1 MGP_LPJ_G0021639.1 mouse_genomes_project 15 9374077 9395676 + Mtmr12 protein_coding processed_transcript MGP_LPJ_T0041325.1 MGP_LPJ_G0021912.1 mouse_genomes_project 15 76893593 76896539 + MGP_LPJ_P0041325 Lrrc14 protein_coding protein_coding MGP_LPJ_T0041326.1 MGP_LPJ_G0021912.1 mouse_genomes_project 15 76893608 76900667 + MGP_LPJ_P0041326 Lrrc14 protein_coding protein_coding MGP_LPJ_T0041327.1 MGP_LPJ_G0021912.1 mouse_genomes_project 15 76893609 76898004 + MGP_LPJ_P0041327 Lrrc14 protein_coding protein_coding MGP_LPJ_T0041328.1 MGP_LPJ_G0021912.1 mouse_genomes_project 15 76893613 76898053 + MGP_LPJ_P0041328 Lrrc14 protein_coding protein_coding MGP_LPJ_T0041329.1 MGP_LPJ_G0021912.1 mouse_genomes_project 15 76893613 76898021 + MGP_LPJ_P0041329 Lrrc14 protein_coding nonsense_mediated_decay MGP_LPJ_T0041330.1 MGP_LPJ_G0021912.1 mouse_genomes_project 15 76893619 76895892 + MGP_LPJ_P0041330 Lrrc14 protein_coding protein_coding MGP_LPJ_T0041331.1 MGP_LPJ_G0021912.1 mouse_genomes_project 15 76893633 76898099 + Lrrc14 protein_coding retained_intron MGP_LPJ_T0041332.1 MGP_LPJ_G0021912.1 mouse_genomes_project 15 76893643 76899617 + Lrrc14 protein_coding retained_intron MGP_LPJ_T0041333.1 MGP_LPJ_G0021912.1 mouse_genomes_project 15 76893643 76897718 + Lrrc14 protein_coding processed_transcript MGP_LPJ_T0041334.1 MGP_LPJ_G0021912.1 mouse_genomes_project 15 76893701 76898060 + MGP_LPJ_P0041334 Lrrc14 protein_coding protein_coding MGP_LPJ_T0006795.1 MGP_LPJ_G0005607.1 mouse_genomes_project 15 74984815 74987700 - Gm28502 lincRNA lincRNA MGP_LPJ_T0041789.1 MGP_LPJ_G0022052.1 mouse_genomes_project 15 83455554 83456920 - MGP_LPJ_P0041789 Cyp2d37-ps protein_coding protein_coding MGP_LPJ_T0006810.1 MGP_LPJ_G0005618.1 mouse_genomes_project 15 86702983 86709162 + D130051D11Rik lincRNA lincRNA MGP_LPJ_T0042101.1 MGP_LPJ_G0022144.1 mouse_genomes_project 15 91902372 92090547 - MGP_LPJ_P0042101 Cpne8 protein_coding nonsense_mediated_decay MGP_LPJ_T0042102.1 MGP_LPJ_G0022144.1 mouse_genomes_project 15 91902373 92090608 - MGP_LPJ_P0042102 Cpne8 protein_coding protein_coding MGP_LPJ_T0042103.1 MGP_LPJ_G0022144.1 mouse_genomes_project 15 92059992 92090552 - Cpne8 protein_coding retained_intron MGP_LPJ_T0040778.1 MGP_LPJ_G0021752.1 mouse_genomes_project 15 53419770 53451409 + MGP_LPJ_P0040778 Mal2 protein_coding protein_coding MGP_LPJ_T0040303.1 MGP_LPJ_G0021589.1 mouse_genomes_project 15 1223235 1350500 + MGP_LPJ_P0040303 Plcxd3 protein_coding nonsense_mediated_decay MGP_LPJ_T0040304.1 MGP_LPJ_G0021589.1 mouse_genomes_project 15 1223248 1405776 + MGP_LPJ_P0040304 Plcxd3 protein_coding protein_coding MGP_LPJ_T0011399.1 MGP_LPJ_G0009517.1 mouse_genomes_project 15 9111303 9111563 + Gm24074 misc_RNA misc_RNA MGP_LPJ_T0040500.1 MGP_LPJ_G0021645.1 mouse_genomes_project 15 10228091 10367917 - MGP_LPJ_P0040500 Cdh6 protein_coding protein_coding MGP_LPJ_T0006834.1 MGP_LPJ_G0005636.1 mouse_genomes_project 15 105502105 105529513 - D930007P13Rik lincRNA lincRNA MGP_LPJ_T0040788.1 MGP_LPJ_G0021757.1 mouse_genomes_project 15 53970323 53986610 - MGP_LPJ_P0040788 Gm9920 protein_coding protein_coding MGP_LPJ_T0040789.1 MGP_LPJ_G0021757.1 mouse_genomes_project 15 53970471 53986488 - MGP_LPJ_P0040789 Gm9920 protein_coding protein_coding MGP_LPJ_T0040790.1 MGP_LPJ_G0021757.1 mouse_genomes_project 15 53983303 53986705 - Gm9920 protein_coding processed_transcript MGP_LPJ_T0040791.1 MGP_LPJ_G0021757.1 mouse_genomes_project 15 53984890 53986488 - Gm9920 protein_coding retained_intron MGP_LPJ_T0040454.1 MGP_LPJ_G0021630.1 mouse_genomes_project 15 8022237 8052384 + MGP_LPJ_P0040454 C1qtnf3 protein_coding protein_coding MGP_LPJ_T0040455.1 MGP_LPJ_G0021630.1 mouse_genomes_project 15 8022262 8051940 + MGP_LPJ_P0040455 C1qtnf3 protein_coding protein_coding MGP_LPJ_T0041196.1 MGP_LPJ_G0021883.1 mouse_genomes_project 15 76453636 76456099 + MGP_LPJ_P0041196 Smpd5 protein_coding protein_coding MGP_LPJ_T0041197.1 MGP_LPJ_G0021883.1 mouse_genomes_project 15 76454170 76455455 + MGP_LPJ_P0041197 Smpd5 protein_coding nonsense_mediated_decay MGP_LPJ_T0041198.1 MGP_LPJ_G0021883.1 mouse_genomes_project 15 76454453 76456096 + Smpd5 protein_coding retained_intron MGP_LPJ_T0041199.1 MGP_LPJ_G0021883.1 mouse_genomes_project 15 76454511 76455076 + Smpd5 protein_coding retained_intron MGP_LPJ_T0100373.1 MGP_LPJ_G0038636.1 mouse_genomes_project 15 28073017 28073090 - Gm24554 snoRNA snoRNA MGP_LPJ_T0010090.1 MGP_LPJ_G0008208.1 mouse_genomes_project 15 83408260 83408317 - Gm27463 miRNA miRNA MGP_LPJ_T0011403.1 MGP_LPJ_G0009521.1 mouse_genomes_project 15 57618294 57618595 + Gm23789 misc_RNA misc_RNA MGP_LPJ_T0100382.1 MGP_LPJ_G0038645.1 mouse_genomes_project 15 36409860 36409996 + Gm22353 snoRNA snoRNA MGP_LPJ_T0042569.1 MGP_LPJ_G0022307.1 mouse_genomes_project 15 104553431 104577076 - MGP_LPJ_P0042569 Rarg protein_coding protein_coding MGP_LPJ_T0042570.1 MGP_LPJ_G0022307.1 mouse_genomes_project 15 104553433 104564859 - MGP_LPJ_P0042570 Rarg protein_coding protein_coding MGP_LPJ_T0042571.1 MGP_LPJ_G0022307.1 mouse_genomes_project 15 104558522 104576908 - MGP_LPJ_P0042571 Rarg protein_coding protein_coding MGP_LPJ_T0042572.1 MGP_LPJ_G0022307.1 mouse_genomes_project 15 104560405 104562056 - Rarg protein_coding processed_transcript MGP_LPJ_T0042573.1 MGP_LPJ_G0022307.1 mouse_genomes_project 15 104560409 104563590 - Rarg protein_coding processed_transcript MGP_LPJ_T0042574.1 MGP_LPJ_G0022307.1 mouse_genomes_project 15 104560409 104569908 - Rarg protein_coding processed_transcript MGP_LPJ_T0101275.1 MGP_LPJ_G0039508.1 mouse_genomes_project 15 58392685 58397760 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101276.1 MGP_LPJ_G0039508.1 mouse_genomes_project 15 58396599 58397677 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0041787.1 MGP_LPJ_G0022050.1 mouse_genomes_project 15 83381594 83386522 - MGP_LPJ_P0041787 Cyp2d34 protein_coding protein_coding MGP_LPJ_T0040572.1 MGP_LPJ_G0021674.1 mouse_genomes_project 15 30358114 30359120 + MGP_LPJ_P0040572 Tas2r119 protein_coding protein_coding MGP_LPJ_T0042262.1 MGP_LPJ_G0022192.1 mouse_genomes_project 15 100140507 100177138 - MGP_LPJ_P0042262 Olfr285 protein_coding protein_coding MGP_LPJ_T0042680.1 MGP_LPJ_G0022337.1 mouse_genomes_project 15 105639906 105644608 + MGP_LPJ_P0042680 Hnrnpa1 protein_coding protein_coding MGP_LPJ_T0000974.1 MGP_LPJ_G0000902.1 mouse_genomes_project 15 86718940 86722294 + TEC TEC MGP_LPJ_T0041403.1 MGP_LPJ_G0021938.1 mouse_genomes_project 15 78523221 78536293 - MGP_LPJ_P0041403 Pvalb protein_coding protein_coding MGP_LPJ_T0041404.1 MGP_LPJ_G0021938.1 mouse_genomes_project 15 78523224 78538456 - MGP_LPJ_P0041404 Pvalb protein_coding protein_coding MGP_LPJ_T0042177.1 MGP_LPJ_G0022167.1 mouse_genomes_project 15 97482160 97488254 - MGP_LPJ_P0042177 Gm17546 protein_coding protein_coding MGP_LPJ_T0041626.1 MGP_LPJ_G0022002.1 mouse_genomes_project 15 81212246 81240793 + MGP_LPJ_P0041626 Fam83f protein_coding protein_coding MGP_LPJ_T0041133.1 MGP_LPJ_G0021866.1 mouse_genomes_project 15 76039037 76045467 + MGP_LPJ_P0041133 Tigd5 protein_coding protein_coding MGP_LPJ_T0006827.1 MGP_LPJ_G0005630.1 mouse_genomes_project 15 103484846 103488250 + 6030408B16Rik lincRNA lincRNA MGP_LPJ_T0006828.1 MGP_LPJ_G0005630.1 mouse_genomes_project 15 103484866 103489055 + 6030408B16Rik lincRNA lincRNA MGP_LPJ_T0040517.1 MGP_LPJ_G0021652.1 mouse_genomes_project 15 23213456 23267531 - MGP_LPJ_P0040517 Basp1 protein_coding protein_coding MGP_LPJ_T0041114.1 MGP_LPJ_G0021864.1 mouse_genomes_project 15 76020268 76023786 - MGP_LPJ_P0041114 Naprt protein_coding protein_coding MGP_LPJ_T0041675.1 MGP_LPJ_G0022012.1 mouse_genomes_project 15 81987898 81989272 - MGP_LPJ_P0041675 Dnajb7 protein_coding protein_coding MGP_LPJ_T0041351.1 MGP_LPJ_G0021917.1 mouse_genomes_project 15 77097817 77099213 + MGP_LPJ_P0041351 Commd5 protein_coding protein_coding MGP_LPJ_T0041352.1 MGP_LPJ_G0021917.1 mouse_genomes_project 15 77097843 77099099 + MGP_LPJ_P0041352 Commd5 protein_coding protein_coding MGP_LPJ_T0040465.1 MGP_LPJ_G0021638.1 mouse_genomes_project 15 9263830 9334564 + MGP_LPJ_P0040465 Zfr protein_coding protein_coding MGP_LPJ_T0040466.1 MGP_LPJ_G0021638.1 mouse_genomes_project 15 9263850 9293072 + MGP_LPJ_P0040466 Zfr protein_coding protein_coding MGP_LPJ_T0040467.1 MGP_LPJ_G0021638.1 mouse_genomes_project 15 9263858 9284857 + MGP_LPJ_P0040467 Zfr protein_coding protein_coding MGP_LPJ_T0040468.1 MGP_LPJ_G0021638.1 mouse_genomes_project 15 9263865 9268324 + Zfr protein_coding processed_transcript MGP_LPJ_T0040469.1 MGP_LPJ_G0021638.1 mouse_genomes_project 15 9306268 9314269 + MGP_LPJ_P0040469 Zfr protein_coding nonsense_mediated_decay MGP_LPJ_T0040470.1 MGP_LPJ_G0021638.1 mouse_genomes_project 15 9307189 9332871 + MGP_LPJ_P0040470 Zfr protein_coding protein_coding MGP_LPJ_T0040471.1 MGP_LPJ_G0021638.1 mouse_genomes_project 15 9314207 9333343 + MGP_LPJ_P0040471 Zfr protein_coding nonsense_mediated_decay MGP_LPJ_T0040472.1 MGP_LPJ_G0021638.1 mouse_genomes_project 15 9318323 9319834 + Zfr protein_coding retained_intron MGP_LPJ_T0040473.1 MGP_LPJ_G0021638.1 mouse_genomes_project 15 9328528 9333343 + Zfr protein_coding processed_transcript MGP_LPJ_T0040759.1 MGP_LPJ_G0021742.1 mouse_genomes_project 15 50625299 50632412 + MGP_LPJ_P0040759 Utp23 protein_coding protein_coding MGP_LPJ_T0040760.1 MGP_LPJ_G0021742.1 mouse_genomes_project 15 50625348 50630488 + MGP_LPJ_P0040760 Utp23 protein_coding protein_coding MGP_LPJ_T0040761.1 MGP_LPJ_G0021742.1 mouse_genomes_project 15 50625375 50630483 + MGP_LPJ_P0040761 Utp23 protein_coding protein_coding MGP_LPJ_T0040762.1 MGP_LPJ_G0021742.1 mouse_genomes_project 15 50625612 50630482 + MGP_LPJ_P0040762 Utp23 protein_coding protein_coding MGP_LPJ_T0042080.1 MGP_LPJ_G0022139.1 mouse_genomes_project 15 90861489 90933087 + MGP_LPJ_P0042080 Shank3 protein_coding protein_coding MGP_LPJ_T0042081.1 MGP_LPJ_G0022139.1 mouse_genomes_project 15 90861617 90933087 + MGP_LPJ_P0042081 Shank3 protein_coding protein_coding MGP_LPJ_T0042082.1 MGP_LPJ_G0022139.1 mouse_genomes_project 15 90861883 90865191 + Shank3 protein_coding processed_transcript MGP_LPJ_T0042083.1 MGP_LPJ_G0022139.1 mouse_genomes_project 15 90863043 90933085 + MGP_LPJ_P0042083 Shank3 protein_coding protein_coding MGP_LPJ_T0042084.1 MGP_LPJ_G0022139.1 mouse_genomes_project 15 90886918 90897002 + Shank3 protein_coding processed_transcript MGP_LPJ_T0042085.1 MGP_LPJ_G0022139.1 mouse_genomes_project 15 90893403 90895016 + Shank3 protein_coding processed_transcript MGP_LPJ_T0042086.1 MGP_LPJ_G0022139.1 mouse_genomes_project 15 90895497 90906409 + MGP_LPJ_P0042086 Shank3 protein_coding protein_coding MGP_LPJ_T0013077.1 MGP_LPJ_G0011168.1 mouse_genomes_project 15 62241681 62242827 + processed_pseudogene processed_pseudogene MGP_LPJ_T0042692.1 MGP_LPJ_G0022340.1 mouse_genomes_project 15 105708807 105711010 - MGP_LPJ_P0042692 Gpr84 protein_coding protein_coding MGP_LPJ_T0041435.1 MGP_LPJ_G0021949.1 mouse_genomes_project 15 79011968 79037052 + MGP_LPJ_P0041435 Cyth4 protein_coding protein_coding MGP_LPJ_T0041211.1 MGP_LPJ_G0021886.1 mouse_genomes_project 15 76493003 76496680 + MGP_LPJ_P0041211 Gpaa1 protein_coding protein_coding MGP_LPJ_T0041212.1 MGP_LPJ_G0021886.1 mouse_genomes_project 15 76493116 76496671 + MGP_LPJ_P0041212 Gpaa1 protein_coding nonsense_mediated_decay MGP_LPJ_T0041213.1 MGP_LPJ_G0021886.1 mouse_genomes_project 15 76493117 76496676 + MGP_LPJ_P0041213 Gpaa1 protein_coding protein_coding MGP_LPJ_T0041214.1 MGP_LPJ_G0021886.1 mouse_genomes_project 15 76493122 76494587 + Gpaa1 protein_coding retained_intron MGP_LPJ_T0041215.1 MGP_LPJ_G0021886.1 mouse_genomes_project 15 76493285 76494259 + MGP_LPJ_P0041215 Gpaa1 protein_coding protein_coding MGP_LPJ_T0041216.1 MGP_LPJ_G0021886.1 mouse_genomes_project 15 76493771 76494694 + MGP_LPJ_P0041216 Gpaa1 protein_coding nonsense_mediated_decay MGP_LPJ_T0041217.1 MGP_LPJ_G0021886.1 mouse_genomes_project 15 76493995 76495390 + Gpaa1 protein_coding retained_intron MGP_LPJ_T0041218.1 MGP_LPJ_G0021886.1 mouse_genomes_project 15 76494299 76495020 + MGP_LPJ_P0041218 Gpaa1 protein_coding protein_coding MGP_LPJ_T0041219.1 MGP_LPJ_G0021886.1 mouse_genomes_project 15 76494941 76496066 + Gpaa1 protein_coding retained_intron MGP_LPJ_T0041220.1 MGP_LPJ_G0021886.1 mouse_genomes_project 15 76495503 76496071 + Gpaa1 protein_coding retained_intron MGP_LPJ_T0040737.1 MGP_LPJ_G0021737.1 mouse_genomes_project 15 43057780 43174511 - MGP_LPJ_P0040737 Sybu protein_coding protein_coding MGP_LPJ_T0040738.1 MGP_LPJ_G0021737.1 mouse_genomes_project 15 43057780 43174511 - MGP_LPJ_P0040738 Sybu protein_coding protein_coding MGP_LPJ_T0040739.1 MGP_LPJ_G0021737.1 mouse_genomes_project 15 43057780 43137590 - MGP_LPJ_P0040739 Sybu protein_coding protein_coding MGP_LPJ_T0042300.1 MGP_LPJ_G0022206.1 mouse_genomes_project 15 100562307 100579358 - MGP_LPJ_P0042300 Rnd1 protein_coding protein_coding MGP_LPJ_T0042301.1 MGP_LPJ_G0022206.1 mouse_genomes_project 15 100567770 100579359 - MGP_LPJ_P0042301 Rnd1 protein_coding protein_coding MGP_LPJ_T0042302.1 MGP_LPJ_G0022206.1 mouse_genomes_project 15 100572483 100579356 - MGP_LPJ_P0042302 Rnd1 protein_coding protein_coding MGP_LPJ_T0017407.1 MGP_LPJ_G0015216.1 mouse_genomes_project 15 73418262 73426133 + 1700010B13Rik processed_transcript lincRNA MGP_LPJ_T0017408.1 MGP_LPJ_G0015216.1 mouse_genomes_project 15 73418284 73420013 + 1700010B13Rik processed_transcript retained_intron MGP_LPJ_T0042311.1 MGP_LPJ_G0022212.1 mouse_genomes_project 15 100715510 100719650 - MGP_LPJ_P0042311 Ddn protein_coding protein_coding MGP_LPJ_T0042328.1 MGP_LPJ_G0022218.1 mouse_genomes_project 15 100932530 100932845 + MGP_LPJ_P0042328 Gm8973 protein_coding protein_coding MGP_LPJ_T0042016.1 MGP_LPJ_G0022122.1 mouse_genomes_project 15 90515331 90529917 - MGP_LPJ_P0042016 Dennd6b protein_coding protein_coding MGP_LPJ_T0013085.1 MGP_LPJ_G0011176.1 mouse_genomes_project 15 76981931 76982286 + processed_pseudogene processed_pseudogene MGP_LPJ_T0040548.1 MGP_LPJ_G0021665.1 mouse_genomes_project 15 28246190 29123420 + MGP_LPJ_P0040548 Ctnnd2 protein_coding protein_coding MGP_LPJ_T0000971.1 MGP_LPJ_G0000899.1 mouse_genomes_project 15 67811111 67816032 - TEC TEC MGP_LPJ_T0003632.1 MGP_LPJ_G0003292.1 mouse_genomes_project 15 83932422 83936274 - Gm17206 antisense antisense MGP_LPJ_T0040569.1 MGP_LPJ_G0021673.1 mouse_genomes_project 15 29731118 29752645 + Fam173b protein_coding processed_transcript MGP_LPJ_T0040570.1 MGP_LPJ_G0021673.1 mouse_genomes_project 15 29731382 29749201 + MGP_LPJ_P0040570 Fam173b protein_coding protein_coding MGP_LPJ_T0040571.1 MGP_LPJ_G0021673.1 mouse_genomes_project 15 29731382 29750276 + MGP_LPJ_P0040571 Fam173b protein_coding nonsense_mediated_decay MGP_LPJ_T0042408.1 MGP_LPJ_G0022244.1 mouse_genomes_project 15 101953172 101966291 - MGP_LPJ_P0042408 protein_coding protein_coding MGP_LPJ_T0042409.1 MGP_LPJ_G0022244.1 mouse_genomes_project 15 101953177 102005416 - MGP_LPJ_P0042409 protein_coding protein_coding MGP_LPJ_T0041550.1 MGP_LPJ_G0021980.1 mouse_genomes_project 15 80144070 80152476 + MGP_LPJ_P0041550 Cby1 protein_coding protein_coding MGP_LPJ_T0041870.1 MGP_LPJ_G0022075.1 mouse_genomes_project 15 85116063 85140913 + MGP_LPJ_P0041870 Samm50 protein_coding protein_coding MGP_LPJ_T0013066.1 MGP_LPJ_G0011157.1 mouse_genomes_project 15 41585420 41586432 - processed_pseudogene processed_pseudogene MGP_LPJ_T0040766.1 MGP_LPJ_G0021746.1 mouse_genomes_project 15 51485110 51504506 + MGP_LPJ_P0040766 Med30 protein_coding protein_coding MGP_LPJ_T0006772.1 MGP_LPJ_G0005596.1 mouse_genomes_project 15 37134509 37291202 - lincRNA lincRNA MGP_LPJ_T0041104.1 MGP_LPJ_G0021859.1 mouse_genomes_project 15 75824987 75835116 + MGP_LPJ_P0041104 Rhpn1 protein_coding protein_coding MGP_LPJ_T0041105.1 MGP_LPJ_G0021859.1 mouse_genomes_project 15 75825015 75835118 + Rhpn1 protein_coding retained_intron MGP_LPJ_T0041106.1 MGP_LPJ_G0021859.1 mouse_genomes_project 15 75825025 75835113 + Rhpn1 protein_coding retained_intron MGP_LPJ_T0041107.1 MGP_LPJ_G0021859.1 mouse_genomes_project 15 75825036 75835116 + MGP_LPJ_P0041107 Rhpn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0041108.1 MGP_LPJ_G0021859.1 mouse_genomes_project 15 75825101 75834933 + MGP_LPJ_P0041108 Rhpn1 protein_coding protein_coding MGP_LPJ_T0042524.1 MGP_LPJ_G0022277.1 mouse_genomes_project 15 103668066 103675652 - MGP_LPJ_P0042524 Krt81 protein_coding protein_coding MGP_LPJ_T0017420.1 MGP_LPJ_G0015223.1 mouse_genomes_project 15 90882766 90886348 - Gm15609 processed_transcript processed_transcript MGP_LPJ_T0041312.1 MGP_LPJ_G0021908.1 mouse_genomes_project 15 76854456 76873980 + protein_coding processed_transcript MGP_LPJ_T0041313.1 MGP_LPJ_G0021908.1 mouse_genomes_project 15 76854469 76877837 + MGP_LPJ_P0041313 protein_coding unknown_likely_coding MGP_LPJ_T0041314.1 MGP_LPJ_G0021908.1 mouse_genomes_project 15 76872351 76873527 + protein_coding processed_transcript MGP_LPJ_T0041315.1 MGP_LPJ_G0021908.1 mouse_genomes_project 15 76873577 76878084 + protein_coding retained_intron MGP_LPJ_T0041316.1 MGP_LPJ_G0021908.1 mouse_genomes_project 15 76873699 76878080 + MGP_LPJ_P0041316 protein_coding nonsense_mediated_decay MGP_LPJ_T0041317.1 MGP_LPJ_G0021908.1 mouse_genomes_project 15 76874603 76876514 + protein_coding retained_intron MGP_LPJ_T0041318.1 MGP_LPJ_G0021908.1 mouse_genomes_project 15 76874618 76876678 + MGP_LPJ_P0041318 protein_coding nonsense_mediated_decay MGP_LPJ_T0041319.1 MGP_LPJ_G0021908.1 mouse_genomes_project 15 76874861 76875658 + protein_coding retained_intron MGP_LPJ_T0041320.1 MGP_LPJ_G0021908.1 mouse_genomes_project 15 76875972 76878084 + protein_coding retained_intron MGP_LPJ_T0041321.1 MGP_LPJ_G0021908.1 mouse_genomes_project 15 76876081 76878084 + protein_coding retained_intron MGP_LPJ_T0042100.1 MGP_LPJ_G0022143.1 mouse_genomes_project 15 91622066 91628310 + MGP_LPJ_P0042100 Alg10b protein_coding protein_coding MGP_LPJ_T0042188.1 MGP_LPJ_G0022172.1 mouse_genomes_project 15 98495455 98495836 - MGP_LPJ_P0042188 Gm8888 protein_coding protein_coding MGP_LPJ_T0013096.1 MGP_LPJ_G0011187.1 mouse_genomes_project 15 92141792 92142158 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011414.1 MGP_LPJ_G0009532.1 mouse_genomes_project 15 101129437 101129525 - Gm25057 misc_RNA misc_RNA MGP_LPJ_T0041354.1 MGP_LPJ_G0021919.1 mouse_genomes_project 15 77108700 77124422 - MGP_LPJ_P0041354 Zfp647 protein_coding unknown_likely_coding MGP_LPJ_T0010112.1 MGP_LPJ_G0008230.1 mouse_genomes_project 15 103990317 103990446 + Gm44323 miRNA miRNA MGP_LPJ_T0040780.1 MGP_LPJ_G0021754.1 mouse_genomes_project 15 53685520 53767663 - MGP_LPJ_P0040780 Enpp2 protein_coding protein_coding MGP_LPJ_T0040781.1 MGP_LPJ_G0021754.1 mouse_genomes_project 15 53685523 53767519 - MGP_LPJ_P0040781 Enpp2 protein_coding protein_coding MGP_LPJ_T0040782.1 MGP_LPJ_G0021754.1 mouse_genomes_project 15 53685892 53767535 - MGP_LPJ_P0040782 Enpp2 protein_coding protein_coding MGP_LPJ_T0040783.1 MGP_LPJ_G0021754.1 mouse_genomes_project 15 53685983 53767478 - MGP_LPJ_P0040783 Enpp2 protein_coding protein_coding MGP_LPJ_T0042114.1 MGP_LPJ_G0022148.1 mouse_genomes_project 15 92693192 93013365 - MGP_LPJ_P0042114 Slc2a13 protein_coding protein_coding MGP_LPJ_T0042115.1 MGP_LPJ_G0022148.1 mouse_genomes_project 15 92829201 92845743 - Slc2a13 protein_coding processed_transcript MGP_LPJ_T0042116.1 MGP_LPJ_G0022148.1 mouse_genomes_project 15 92982356 93013298 - Slc2a13 protein_coding processed_transcript MGP_LPJ_T0017403.1 MGP_LPJ_G0015213.1 mouse_genomes_project 15 65239725 65240213 + Gm20405 processed_transcript processed_transcript MGP_LPJ_T0041036.1 MGP_LPJ_G0021834.1 mouse_genomes_project 15 74562989 74566399 + MGP_LPJ_P0041036 Them6 protein_coding protein_coding MGP_LPJ_T0040460.1 MGP_LPJ_G0021635.1 mouse_genomes_project 15 8482390 8498362 - MGP_LPJ_P0040460 Tars protein_coding protein_coding MGP_LPJ_T0010083.1 MGP_LPJ_G0008201.1 mouse_genomes_project 15 83084955 83085015 - Gm27331 miRNA miRNA MGP_LPJ_T0098175.1 MGP_LPJ_G0036456.1 mouse_genomes_project 15 31796451 31796582 - Gm24476 rRNA rRNA MGP_LPJ_T0040627.1 MGP_LPJ_G0021694.1 mouse_genomes_project 15 34431809 34446686 - MGP_LPJ_P0040627 Fbxo43 protein_coding protein_coding MGP_LPJ_T0040967.1 MGP_LPJ_G0021814.1 mouse_genomes_project 15 67550574 67740964 - MGP_LPJ_P0040967 Zfat protein_coding protein_coding MGP_LPJ_T0040968.1 MGP_LPJ_G0021814.1 mouse_genomes_project 15 67551129 67740895 - MGP_LPJ_P0040968 Zfat protein_coding protein_coding MGP_LPJ_T0040969.1 MGP_LPJ_G0021814.1 mouse_genomes_project 15 67551130 67740946 - MGP_LPJ_P0040969 Zfat protein_coding protein_coding MGP_LPJ_T0040970.1 MGP_LPJ_G0021814.1 mouse_genomes_project 15 67657493 67740955 - MGP_LPJ_P0040970 Zfat protein_coding protein_coding MGP_LPJ_T0040971.1 MGP_LPJ_G0021814.1 mouse_genomes_project 15 67699078 67740957 - Zfat protein_coding retained_intron MGP_LPJ_T0040692.1 MGP_LPJ_G0021714.1 mouse_genomes_project 15 37209308 37228275 + MGP_LPJ_P0040692 Baalc protein_coding protein_coding MGP_LPJ_T0042155.1 MGP_LPJ_G0022158.1 mouse_genomes_project 15 95852582 95985102 - MGP_LPJ_P0042155 Adamts20 protein_coding protein_coding MGP_LPJ_T0042156.1 MGP_LPJ_G0022158.1 mouse_genomes_project 15 95900719 95985102 - MGP_LPJ_P0042156 Adamts20 protein_coding protein_coding MGP_LPJ_T0042157.1 MGP_LPJ_G0022158.1 mouse_genomes_project 15 95932659 95985194 - Adamts20 protein_coding retained_intron MGP_LPJ_T0042158.1 MGP_LPJ_G0022158.1 mouse_genomes_project 15 95975577 96049501 - Adamts20 protein_coding processed_transcript MGP_LPJ_T0040856.1 MGP_LPJ_G0021781.1 mouse_genomes_project 15 57935354 57939487 + MGP_LPJ_P0040856 Trmt12 protein_coding protein_coding MGP_LPJ_T0042375.1 MGP_LPJ_G0022234.1 mouse_genomes_project 15 101596101 101599861 + MGP_LPJ_P0042375 Aqp5 protein_coding protein_coding MGP_LPJ_T0042376.1 MGP_LPJ_G0022234.1 mouse_genomes_project 15 101596280 101600082 + MGP_LPJ_P0042376 Aqp5 protein_coding protein_coding MGP_LPJ_T0010076.1 MGP_LPJ_G0008194.1 mouse_genomes_project 15 80478756 80478847 - Mir7213 miRNA miRNA MGP_LPJ_T0003654.1 MGP_LPJ_G0003311.1 mouse_genomes_project 15 105478899 105481712 + Gm10830 antisense antisense MGP_LPJ_T0041793.1 MGP_LPJ_G0022055.1 mouse_genomes_project 15 83603613 83716853 - MGP_LPJ_P0041793 Tcf20 protein_coding protein_coding MGP_LPJ_T0041794.1 MGP_LPJ_G0022055.1 mouse_genomes_project 15 83603613 83716853 - MGP_LPJ_P0041794 Tcf20 protein_coding protein_coding MGP_LPJ_T0006798.1 MGP_LPJ_G0005610.1 mouse_genomes_project 15 79293358 79297311 - Gm26634 lincRNA lincRNA MGP_LPJ_T0041402.1 MGP_LPJ_G0021937.1 mouse_genomes_project 15 78491563 78506195 - MGP_LPJ_P0041402 Ift27 protein_coding protein_coding MGP_LPJ_T0099108.1 MGP_LPJ_G0037371.1 mouse_genomes_project 15 34491313 34491370 + Gm23754 snRNA snRNA MGP_LPJ_T0042191.1 MGP_LPJ_G0022174.1 mouse_genomes_project 15 98997992 99001200 - MGP_LPJ_P0042191 Amigo2 protein_coding protein_coding MGP_LPJ_T0099143.1 MGP_LPJ_G0037406.1 mouse_genomes_project 15 94867047 94867151 + Gm26371 snRNA snRNA MGP_LPJ_T0098178.1 MGP_LPJ_G0036459.1 mouse_genomes_project 15 83006246 83006365 + n-R5s41 rRNA rRNA MGP_LPJ_T0042545.1 MGP_LPJ_G0022297.1 mouse_genomes_project 15 104292871 104302737 - MGP_LPJ_P0042545 Krt8 protein_coding protein_coding MGP_LPJ_T0042394.1 MGP_LPJ_G0022239.1 mouse_genomes_project 15 101721168 101735153 + MGP_LPJ_P0042394 Smarcd1 protein_coding protein_coding MGP_LPJ_T0042162.1 MGP_LPJ_G0022160.1 mouse_genomes_project 15 96131737 96157684 + MGP_LPJ_P0042162 Irak4 protein_coding protein_coding MGP_LPJ_T0042163.1 MGP_LPJ_G0022160.1 mouse_genomes_project 15 96131747 96145453 + Irak4 protein_coding retained_intron MGP_LPJ_T0042164.1 MGP_LPJ_G0022160.1 mouse_genomes_project 15 96131766 96171587 + MGP_LPJ_P0042164 Irak4 protein_coding protein_coding MGP_LPJ_T0042165.1 MGP_LPJ_G0022160.1 mouse_genomes_project 15 96132103 96156411 + MGP_LPJ_P0042165 Irak4 protein_coding unknown_likely_coding MGP_LPJ_T0041688.1 MGP_LPJ_G0022016.1 mouse_genomes_project 15 82264011 82292306 + MGP_LPJ_P0041688 L3mbtl2 protein_coding protein_coding MGP_LPJ_T0041689.1 MGP_LPJ_G0022016.1 mouse_genomes_project 15 82264056 82292296 + MGP_LPJ_P0041689 L3mbtl2 protein_coding protein_coding MGP_LPJ_T0041690.1 MGP_LPJ_G0022016.1 mouse_genomes_project 15 82264076 82292296 + L3mbtl2 protein_coding retained_intron MGP_LPJ_T0041691.1 MGP_LPJ_G0022016.1 mouse_genomes_project 15 82264078 82292290 + L3mbtl2 protein_coding processed_transcript MGP_LPJ_T0041692.1 MGP_LPJ_G0022016.1 mouse_genomes_project 15 82264078 82292306 + MGP_LPJ_P0041692 L3mbtl2 protein_coding protein_coding MGP_LPJ_T0041693.1 MGP_LPJ_G0022016.1 mouse_genomes_project 15 82264123 82286056 + L3mbtl2 protein_coding processed_transcript MGP_LPJ_T0041694.1 MGP_LPJ_G0022016.1 mouse_genomes_project 15 82270774 82272468 + L3mbtl2 protein_coding retained_intron MGP_LPJ_T0041695.1 MGP_LPJ_G0022016.1 mouse_genomes_project 15 82270843 82279630 + L3mbtl2 protein_coding processed_transcript MGP_LPJ_T0041696.1 MGP_LPJ_G0022016.1 mouse_genomes_project 15 82279518 82281291 + MGP_LPJ_P0041696 L3mbtl2 protein_coding protein_coding MGP_LPJ_T0041698.1 MGP_LPJ_G0022016.1 mouse_genomes_project 15 82285999 82287841 + L3mbtl2 protein_coding retained_intron MGP_LPJ_T0041699.1 MGP_LPJ_G0022016.1 mouse_genomes_project 15 82290012 82291178 + L3mbtl2 protein_coding retained_intron MGP_LPJ_T0040285.1 MGP_LPJ_G0021584.1 mouse_genomes_project 15 116211 138800 - MGP_LPJ_P0040285 Ccdc152 protein_coding protein_coding MGP_LPJ_T0040370.1 MGP_LPJ_G0021610.1 mouse_genomes_project 15 5138475 5215845 + MGP_LPJ_P0040370 2410089E03Rik protein_coding unknown_likely_coding MGP_LPJ_T0040371.1 MGP_LPJ_G0021610.1 mouse_genomes_project 15 5138515 5248635 + MGP_LPJ_P0040371 2410089E03Rik protein_coding protein_coding MGP_LPJ_T0040372.1 MGP_LPJ_G0021610.1 mouse_genomes_project 15 5156036 5156891 + 2410089E03Rik protein_coding retained_intron MGP_LPJ_T0040373.1 MGP_LPJ_G0021610.1 mouse_genomes_project 15 5164057 5173311 + 2410089E03Rik protein_coding retained_intron MGP_LPJ_T0040374.1 MGP_LPJ_G0021610.1 mouse_genomes_project 15 5188497 5191160 + 2410089E03Rik protein_coding retained_intron MGP_LPJ_T0040375.1 MGP_LPJ_G0021610.1 mouse_genomes_project 15 5222765 5229889 + 2410089E03Rik protein_coding retained_intron MGP_LPJ_T0010055.1 MGP_LPJ_G0008173.1 mouse_genomes_project 15 38460632 38460703 - Gm25958 miRNA miRNA MGP_LPJ_T0041427.1 MGP_LPJ_G0021944.1 mouse_genomes_project 15 78840412 78869268 - MGP_LPJ_P0041427 Tmprss6 protein_coding protein_coding MGP_LPJ_T0041989.1 MGP_LPJ_G0022116.1 mouse_genomes_project 15 90422383 90431454 + MGP_LPJ_P0041989 protein_coding nonsense_mediated_decay MGP_LPJ_T0041990.1 MGP_LPJ_G0022116.1 mouse_genomes_project 15 90422383 90433608 + MGP_LPJ_P0041990 protein_coding protein_coding MGP_LPJ_T0041731.1 MGP_LPJ_G0022027.1 mouse_genomes_project 15 82570134 82579952 - MGP_LPJ_P0041731 Pmm1 protein_coding protein_coding MGP_LPJ_T0041732.1 MGP_LPJ_G0022027.1 mouse_genomes_project 15 82570134 82579891 - MGP_LPJ_P0041732 Pmm1 protein_coding protein_coding MGP_LPJ_T0041733.1 MGP_LPJ_G0022027.1 mouse_genomes_project 15 82570428 82572531 - Pmm1 protein_coding retained_intron MGP_LPJ_T0041734.1 MGP_LPJ_G0022027.1 mouse_genomes_project 15 82570470 82579864 - MGP_LPJ_P0041734 Pmm1 protein_coding nonsense_mediated_decay MGP_LPJ_T0041735.1 MGP_LPJ_G0022027.1 mouse_genomes_project 15 82570573 82571291 - Pmm1 protein_coding retained_intron MGP_LPJ_T0041736.1 MGP_LPJ_G0022027.1 mouse_genomes_project 15 82574581 82579855 - Pmm1 protein_coding retained_intron MGP_LPJ_T0041737.1 MGP_LPJ_G0022027.1 mouse_genomes_project 15 82576362 82579786 - Pmm1 protein_coding retained_intron MGP_LPJ_T0042074.1 MGP_LPJ_G0022137.1 mouse_genomes_project 15 90812821 90825529 + MGP_LPJ_P0042074 Mapk8ip2 protein_coding protein_coding MGP_LPJ_T0042075.1 MGP_LPJ_G0022137.1 mouse_genomes_project 15 90815707 90817325 + MGP_LPJ_P0042075 Mapk8ip2 protein_coding protein_coding MGP_LPJ_T0000978.1 MGP_LPJ_G0000906.1 mouse_genomes_project 15 105431155 105432182 - TEC TEC MGP_LPJ_T0013074.1 MGP_LPJ_G0011165.1 mouse_genomes_project 15 59108288 59108738 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013094.1 MGP_LPJ_G0011185.1 mouse_genomes_project 15 86552484 86552892 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010072.1 MGP_LPJ_G0008190.1 mouse_genomes_project 15 79441431 79441493 + Mir6956 miRNA miRNA MGP_LPJ_T0040549.1 MGP_LPJ_G0021666.1 mouse_genomes_project 15 29313246 29364401 + MGP_LPJ_P0040549 Dap protein_coding protein_coding MGP_LPJ_T0040550.1 MGP_LPJ_G0021666.1 mouse_genomes_project 15 29313320 29364408 + MGP_LPJ_P0040550 Dap protein_coding protein_coding MGP_LPJ_T0040551.1 MGP_LPJ_G0021666.1 mouse_genomes_project 15 29313351 29364541 + MGP_LPJ_P0040551 Dap protein_coding protein_coding MGP_LPJ_T0040552.1 MGP_LPJ_G0021666.1 mouse_genomes_project 15 29359448 29364466 + MGP_LPJ_P0040552 Dap protein_coding protein_coding MGP_LPJ_T0041494.1 MGP_LPJ_G0021966.1 mouse_genomes_project 15 79586802 79598906 + MGP_LPJ_P0041494 Polr2f protein_coding protein_coding MGP_LPJ_T0003641.1 MGP_LPJ_G0003299.1 mouse_genomes_project 15 100459028 100461288 + 9330020H09Rik antisense antisense MGP_LPJ_T0040462.1 MGP_LPJ_G0021637.1 mouse_genomes_project 15 9128076 9142798 - MGP_LPJ_P0040462 Sub1 protein_coding unknown_likely_coding MGP_LPJ_T0040463.1 MGP_LPJ_G0021637.1 mouse_genomes_project 15 9132883 9142755 - Sub1 protein_coding retained_intron MGP_LPJ_T0040464.1 MGP_LPJ_G0021637.1 mouse_genomes_project 15 9133203 9142493 - Sub1 protein_coding processed_transcript MGP_LPJ_T0041544.1 MGP_LPJ_G0021978.1 mouse_genomes_project 15 80034576 80079489 - MGP_LPJ_P0041544 Dmc1 protein_coding protein_coding MGP_LPJ_T0000969.1 MGP_LPJ_G0000897.1 mouse_genomes_project 15 61211246 61215332 - TEC TEC MGP_LPJ_T0003610.1 MGP_LPJ_G0003275.1 mouse_genomes_project 15 38062469 38078981 + Gm16291 antisense antisense MGP_LPJ_T0040417.1 MGP_LPJ_G0021622.1 mouse_genomes_project 15 7200453 7359108 + Prlr protein_coding retained_intron MGP_LPJ_T0040418.1 MGP_LPJ_G0021622.1 mouse_genomes_project 15 7200629 7378063 + Prlr protein_coding processed_transcript MGP_LPJ_T0040419.1 MGP_LPJ_G0021622.1 mouse_genomes_project 15 7200861 7378333 + MGP_LPJ_P0040419 Prlr protein_coding nonsense_mediated_decay MGP_LPJ_T0040420.1 MGP_LPJ_G0021622.1 mouse_genomes_project 15 7200870 7366719 + MGP_LPJ_P0040420 Prlr protein_coding protein_coding MGP_LPJ_T0040421.1 MGP_LPJ_G0021622.1 mouse_genomes_project 15 7200996 7349212 + Prlr protein_coding retained_intron MGP_LPJ_T0040422.1 MGP_LPJ_G0021622.1 mouse_genomes_project 15 7238628 7348500 + Prlr protein_coding processed_transcript MGP_LPJ_T0040423.1 MGP_LPJ_G0021622.1 mouse_genomes_project 15 7241118 7348566 + MGP_LPJ_P0040423 Prlr protein_coding protein_coding MGP_LPJ_T0040424.1 MGP_LPJ_G0021622.1 mouse_genomes_project 15 7249133 7378965 + MGP_LPJ_P0040424 Prlr protein_coding protein_coding MGP_LPJ_T0040425.1 MGP_LPJ_G0021622.1 mouse_genomes_project 15 7249133 7371760 + MGP_LPJ_P0040425 Prlr protein_coding protein_coding MGP_LPJ_T0040426.1 MGP_LPJ_G0021622.1 mouse_genomes_project 15 7249133 7375557 + MGP_LPJ_P0040426 Prlr protein_coding protein_coding MGP_LPJ_T0040427.1 MGP_LPJ_G0021622.1 mouse_genomes_project 15 7275712 7351714 + MGP_LPJ_P0040427 Prlr protein_coding protein_coding MGP_LPJ_T0040428.1 MGP_LPJ_G0021622.1 mouse_genomes_project 15 7343327 7351696 + MGP_LPJ_P0040428 Prlr protein_coding protein_coding MGP_LPJ_T0013091.1 MGP_LPJ_G0011182.1 mouse_genomes_project 15 84940211 84940548 + processed_pseudogene processed_pseudogene MGP_LPJ_T0040885.1 MGP_LPJ_G0021795.1 mouse_genomes_project 15 63088162 63108715 - MGP_LPJ_P0040885 Gsdmc protein_coding protein_coding MGP_LPJ_T0040886.1 MGP_LPJ_G0021795.1 mouse_genomes_project 15 63091544 63104318 - MGP_LPJ_P0040886 Gsdmc protein_coding protein_coding MGP_LPJ_T0042555.1 MGP_LPJ_G0022303.1 mouse_genomes_project 15 104464391 104478504 + MGP_LPJ_P0042555 Soat2 protein_coding protein_coding MGP_LPJ_T0042556.1 MGP_LPJ_G0022303.1 mouse_genomes_project 15 104464981 104478162 + MGP_LPJ_P0042556 Soat2 protein_coding nonsense_mediated_decay MGP_LPJ_T0040846.1 MGP_LPJ_G0021774.1 mouse_genomes_project 15 57187535 57226553 - MGP_LPJ_P0040846 Fbxo32 protein_coding protein_coding MGP_LPJ_T0013081.1 MGP_LPJ_G0011172.1 mouse_genomes_project 15 75879206 75967444 - processed_pseudogene processed_pseudogene MGP_LPJ_T0040609.1 MGP_LPJ_G0021687.1 mouse_genomes_project 15 32785064 32918046 - MGP_LPJ_P0040609 Nipal2 protein_coding protein_coding MGP_LPJ_T0013087.1 MGP_LPJ_G0011178.1 mouse_genomes_project 15 78959910 78960348 - processed_pseudogene processed_pseudogene MGP_LPJ_T0042336.1 MGP_LPJ_G0022224.1 mouse_genomes_project 15 101185702 101204719 + MGP_LPJ_P0042336 Kcnh3 protein_coding protein_coding MGP_LPJ_T0013060.1 MGP_LPJ_G0011151.1 mouse_genomes_project 15 35649251 35649929 - processed_pseudogene processed_pseudogene MGP_LPJ_T0042533.1 MGP_LPJ_G0022286.1 mouse_genomes_project 15 104016385 104027059 - MGP_LPJ_P0042533 Krt71 protein_coding protein_coding MGP_LPJ_T0006784.1 MGP_LPJ_G0005605.1 mouse_genomes_project 15 61269561 61489365 + lincRNA lincRNA MGP_LPJ_T0006785.1 MGP_LPJ_G0005605.1 mouse_genomes_project 15 61269613 61498463 + lincRNA lincRNA MGP_LPJ_T0006786.1 MGP_LPJ_G0005605.1 mouse_genomes_project 15 61269622 61489361 + lincRNA lincRNA MGP_LPJ_T0006787.1 MGP_LPJ_G0005605.1 mouse_genomes_project 15 61269625 61616846 + lincRNA lincRNA MGP_LPJ_T0006788.1 MGP_LPJ_G0005605.1 mouse_genomes_project 15 61269636 61490810 + lincRNA lincRNA MGP_LPJ_T0006789.1 MGP_LPJ_G0005605.1 mouse_genomes_project 15 61270832 61489060 + lincRNA lincRNA MGP_LPJ_T0006790.1 MGP_LPJ_G0005605.1 mouse_genomes_project 15 61332406 61340862 + lincRNA lincRNA MGP_LPJ_T0006791.1 MGP_LPJ_G0005605.1 mouse_genomes_project 15 61419465 61490812 + lincRNA lincRNA MGP_LPJ_T0006792.1 MGP_LPJ_G0005605.1 mouse_genomes_project 15 61459562 61489363 + lincRNA lincRNA MGP_LPJ_T0006793.1 MGP_LPJ_G0005605.1 mouse_genomes_project 15 61463942 61482342 + lincRNA lincRNA MGP_LPJ_T0040714.1 MGP_LPJ_G0021724.1 mouse_genomes_project 15 38934990 39399784 + MGP_LPJ_P0040714 Zfpm2 protein_coding protein_coding MGP_LPJ_T0040573.1 MGP_LPJ_G0021675.1 mouse_genomes_project 15 30435348 30906551 + MGP_LPJ_P0040573 Sema5a protein_coding protein_coding MGP_LPJ_T0042669.1 MGP_LPJ_G0022333.1 mouse_genomes_project 15 105370170 105382669 + Hoxc6 protein_coding processed_transcript MGP_LPJ_T0042670.1 MGP_LPJ_G0022333.1 mouse_genomes_project 15 105372443 105381907 + Hoxc6 protein_coding processed_transcript MGP_LPJ_T0042671.1 MGP_LPJ_G0022333.1 mouse_genomes_project 15 105381473 105383782 + MGP_LPJ_P0042671 Hoxc6 protein_coding protein_coding MGP_LPJ_T0040286.1 MGP_LPJ_G0021585.1 mouse_genomes_project 15 151745 424370 - MGP_LPJ_P0040286 Ghr protein_coding protein_coding MGP_LPJ_T0040287.1 MGP_LPJ_G0021585.1 mouse_genomes_project 15 152994 423034 - MGP_LPJ_P0040287 Ghr protein_coding protein_coding MGP_LPJ_T0040288.1 MGP_LPJ_G0021585.1 mouse_genomes_project 15 161217 424328 - MGP_LPJ_P0040288 Ghr protein_coding protein_coding MGP_LPJ_T0040289.1 MGP_LPJ_G0021585.1 mouse_genomes_project 15 161231 315160 - MGP_LPJ_P0040289 Ghr protein_coding protein_coding MGP_LPJ_T0040290.1 MGP_LPJ_G0021585.1 mouse_genomes_project 15 167125 423788 - MGP_LPJ_P0040290 Ghr protein_coding protein_coding MGP_LPJ_T0040291.1 MGP_LPJ_G0021585.1 mouse_genomes_project 15 174535 424328 - Ghr protein_coding processed_transcript MGP_LPJ_T0040292.1 MGP_LPJ_G0021585.1 mouse_genomes_project 15 178640 424352 - Ghr protein_coding retained_intron MGP_LPJ_T0040293.1 MGP_LPJ_G0021585.1 mouse_genomes_project 15 179922 424351 - Ghr protein_coding processed_transcript MGP_LPJ_T0040294.1 MGP_LPJ_G0021585.1 mouse_genomes_project 15 217908 424632 - Ghr protein_coding retained_intron MGP_LPJ_T0040295.1 MGP_LPJ_G0021585.1 mouse_genomes_project 15 385791 424327 - Ghr protein_coding processed_transcript MGP_LPJ_T0017413.1 MGP_LPJ_G0015221.1 mouse_genomes_project 15 81755766 81757756 + 4930483J18Rik processed_transcript processed_transcript MGP_LPJ_T0017414.1 MGP_LPJ_G0015221.1 mouse_genomes_project 15 81755845 81757749 + 4930483J18Rik processed_transcript processed_transcript MGP_LPJ_T0042592.1 MGP_LPJ_G0022312.1 mouse_genomes_project 15 104667247 104679434 - MGP_LPJ_P0042592 Aaas protein_coding protein_coding MGP_LPJ_T0000963.1 MGP_LPJ_G0000891.1 mouse_genomes_project 15 4613942 4614318 - TEC TEC MGP_LPJ_T0042547.1 MGP_LPJ_G0022299.1 mouse_genomes_project 15 104376881 104401086 + MGP_LPJ_P0042547 Eif4b protein_coding protein_coding MGP_LPJ_T0101891.1 MGP_LPJ_G0039928.1 mouse_genomes_project 15 74888124 74900430 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0040848.1 MGP_LPJ_G0021776.1 mouse_genomes_project 15 57359053 57398606 - MGP_LPJ_P0040848 Anxa13 protein_coding protein_coding MGP_LPJ_T0040849.1 MGP_LPJ_G0021776.1 mouse_genomes_project 15 57359053 57435114 - MGP_LPJ_P0040849 Anxa13 protein_coding unknown_likely_coding MGP_LPJ_T0042308.1 MGP_LPJ_G0022210.1 mouse_genomes_project 15 100679980 100686345 - MGP_LPJ_P0042308 Wnt10b protein_coding protein_coding MGP_LPJ_T0042309.1 MGP_LPJ_G0022210.1 mouse_genomes_project 15 100680427 100685460 - MGP_LPJ_P0042309 Wnt10b protein_coding protein_coding MGP_LPJ_T0099105.1 MGP_LPJ_G0037368.1 mouse_genomes_project 15 28690041 28690104 + Gm24487 snRNA snRNA MGP_LPJ_T0040589.1 MGP_LPJ_G0021681.1 mouse_genomes_project 15 32495151 32641221 + MGP_LPJ_P0040589 Matn2 protein_coding protein_coding MGP_LPJ_T0040590.1 MGP_LPJ_G0021681.1 mouse_genomes_project 15 32495152 32641225 + MGP_LPJ_P0040590 Matn2 protein_coding protein_coding MGP_LPJ_T0003604.1 MGP_LPJ_G0003271.1 mouse_genomes_project 15 3190372 3197042 - Gm16311 antisense antisense MGP_LPJ_T0010115.1 MGP_LPJ_G0008233.1 mouse_genomes_project 15 105344031 105344116 + Mir196a-2 miRNA miRNA MGP_LPJ_T0041296.1 MGP_LPJ_G0021903.1 mouse_genomes_project 15 76791246 76795635 - MGP_LPJ_P0041296 Slc39a4 protein_coding protein_coding MGP_LPJ_T0041050.1 MGP_LPJ_G0021842.1 mouse_genomes_project 15 74673301 74695338 + MGP_LPJ_P0041050 protein_coding protein_coding MGP_LPJ_T0041051.1 MGP_LPJ_G0021842.1 mouse_genomes_project 15 74673301 74692960 + MGP_LPJ_P0041051 protein_coding protein_coding MGP_LPJ_T0041054.1 MGP_LPJ_G0021842.1 mouse_genomes_project 15 74689171 74695340 + MGP_LPJ_P0041054 protein_coding protein_coding MGP_LPJ_T0042392.1 MGP_LPJ_G0022237.1 mouse_genomes_project 15 101683609 101720009 + MGP_LPJ_P0042392 Asic1 protein_coding protein_coding MGP_LPJ_T0042339.1 MGP_LPJ_G0022227.1 mouse_genomes_project 15 101275933 101286796 + MGP_LPJ_P0042339 Prpf40b protein_coding protein_coding MGP_LPJ_T0042340.1 MGP_LPJ_G0022227.1 mouse_genomes_project 15 101276085 101297849 + Prpf40b protein_coding retained_intron MGP_LPJ_T0042341.1 MGP_LPJ_G0022227.1 mouse_genomes_project 15 101276087 101296945 + Prpf40b protein_coding retained_intron MGP_LPJ_T0042342.1 MGP_LPJ_G0022227.1 mouse_genomes_project 15 101276087 101296945 + Prpf40b protein_coding retained_intron MGP_LPJ_T0042343.1 MGP_LPJ_G0022227.1 mouse_genomes_project 15 101276090 101287908 + MGP_LPJ_P0042343 Prpf40b protein_coding nonsense_mediated_decay MGP_LPJ_T0042344.1 MGP_LPJ_G0022227.1 mouse_genomes_project 15 101276117 101297849 + MGP_LPJ_P0042344 Prpf40b protein_coding protein_coding MGP_LPJ_T0042345.1 MGP_LPJ_G0022227.1 mouse_genomes_project 15 101276741 101297841 + MGP_LPJ_P0042345 Prpf40b protein_coding protein_coding MGP_LPJ_T0042346.1 MGP_LPJ_G0022227.1 mouse_genomes_project 15 101284129 101297330 + MGP_LPJ_P0042346 Prpf40b protein_coding protein_coding MGP_LPJ_T0042347.1 MGP_LPJ_G0022227.1 mouse_genomes_project 15 101284130 101297838 + MGP_LPJ_P0042347 Prpf40b protein_coding protein_coding MGP_LPJ_T0042348.1 MGP_LPJ_G0022227.1 mouse_genomes_project 15 101288715 101295924 + Prpf40b protein_coding retained_intron MGP_LPJ_T0042349.1 MGP_LPJ_G0022227.1 mouse_genomes_project 15 101290733 101296721 + Prpf40b protein_coding retained_intron MGP_LPJ_T0042350.1 MGP_LPJ_G0022227.1 mouse_genomes_project 15 101295698 101296625 + Prpf40b protein_coding retained_intron MGP_LPJ_T0042351.1 MGP_LPJ_G0022227.1 mouse_genomes_project 15 101295707 101297502 + MGP_LPJ_P0042351 Prpf40b protein_coding protein_coding MGP_LPJ_T0042352.1 MGP_LPJ_G0022227.1 mouse_genomes_project 15 101295736 101297644 + MGP_LPJ_P0042352 Prpf40b protein_coding protein_coding MGP_LPJ_T0042353.1 MGP_LPJ_G0022227.1 mouse_genomes_project 15 101296370 101297841 + MGP_LPJ_P0042353 Prpf40b protein_coding protein_coding MGP_LPJ_T0042652.1 MGP_LPJ_G0022324.1 mouse_genomes_project 15 105006331 105015912 - MGP_LPJ_P0042652 Atp5g2 protein_coding protein_coding MGP_LPJ_T0042653.1 MGP_LPJ_G0022324.1 mouse_genomes_project 15 105006481 105012534 - MGP_LPJ_P0042653 Atp5g2 protein_coding protein_coding MGP_LPJ_T0042654.1 MGP_LPJ_G0022324.1 mouse_genomes_project 15 105008206 105012528 - MGP_LPJ_P0042654 Atp5g2 protein_coding protein_coding MGP_LPJ_T0042655.1 MGP_LPJ_G0022324.1 mouse_genomes_project 15 105010584 105017137 - MGP_LPJ_P0042655 Atp5g2 protein_coding protein_coding MGP_LPJ_T0040316.1 MGP_LPJ_G0021595.1 mouse_genomes_project 15 1952697 1956433 + MGP_LPJ_P0040316 Rpl37 protein_coding protein_coding MGP_LPJ_T0006758.1 MGP_LPJ_G0005586.1 mouse_genomes_project 15 9110252 9115448 + 1700047G03Rik lincRNA lincRNA MGP_LPJ_T0006759.1 MGP_LPJ_G0005586.1 mouse_genomes_project 15 9110313 9116057 + 1700047G03Rik lincRNA lincRNA MGP_LPJ_T0006760.1 MGP_LPJ_G0005586.1 mouse_genomes_project 15 9110400 9115479 + 1700047G03Rik lincRNA lincRNA MGP_LPJ_T0006761.1 MGP_LPJ_G0005586.1 mouse_genomes_project 15 9113035 9116042 + 1700047G03Rik lincRNA lincRNA MGP_LPJ_T0040480.1 MGP_LPJ_G0021641.1 mouse_genomes_project 15 9480421 9510149 + MGP_LPJ_P0040480 Golph3 protein_coding protein_coding MGP_LPJ_T0042613.1 MGP_LPJ_G0022318.1 mouse_genomes_project 15 104837225 104856386 - MGP_LPJ_P0042613 Map3k12 protein_coding protein_coding MGP_LPJ_T0042614.1 MGP_LPJ_G0022318.1 mouse_genomes_project 15 104838352 104850271 - MGP_LPJ_P0042614 Map3k12 protein_coding protein_coding MGP_LPJ_T0042615.1 MGP_LPJ_G0022318.1 mouse_genomes_project 15 104838601 104856614 - MGP_LPJ_P0042615 Map3k12 protein_coding protein_coding MGP_LPJ_T0042617.1 MGP_LPJ_G0022318.1 mouse_genomes_project 15 104844946 104856554 - MGP_LPJ_P0042617 Map3k12 protein_coding protein_coding MGP_LPJ_T0042618.1 MGP_LPJ_G0022318.1 mouse_genomes_project 15 104845008 104856525 - MGP_LPJ_P0042618 Map3k12 protein_coding protein_coding MGP_LPJ_T0042619.1 MGP_LPJ_G0022318.1 mouse_genomes_project 15 104845045 104856366 - MGP_LPJ_P0042619 Map3k12 protein_coding protein_coding MGP_LPJ_T0042620.1 MGP_LPJ_G0022318.1 mouse_genomes_project 15 104845694 104856362 - Map3k12 protein_coding processed_transcript MGP_LPJ_T0042621.1 MGP_LPJ_G0022318.1 mouse_genomes_project 15 104848682 104850363 - Map3k12 protein_coding processed_transcript MGP_LPJ_T0041381.1 MGP_LPJ_G0021932.1 mouse_genomes_project 15 78076733 78162667 - MGP_LPJ_P0041381 Myh9 protein_coding protein_coding MGP_LPJ_T0041382.1 MGP_LPJ_G0021932.1 mouse_genomes_project 15 78081453 78083316 - Myh9 protein_coding retained_intron MGP_LPJ_T0041383.1 MGP_LPJ_G0021932.1 mouse_genomes_project 15 78104308 78162548 - Myh9 protein_coding retained_intron MGP_LPJ_T0041384.1 MGP_LPJ_G0021932.1 mouse_genomes_project 15 78106339 78162597 - Myh9 protein_coding retained_intron MGP_LPJ_T0041385.1 MGP_LPJ_G0021932.1 mouse_genomes_project 15 78106855 78162539 - MGP_LPJ_P0041385 Myh9 protein_coding nonsense_mediated_decay MGP_LPJ_T0041386.1 MGP_LPJ_G0021932.1 mouse_genomes_project 15 78110766 78129343 - Myh9 protein_coding processed_transcript MGP_LPJ_T0041387.1 MGP_LPJ_G0021932.1 mouse_genomes_project 15 78121663 78162597 - Myh9 protein_coding retained_intron MGP_LPJ_T0041135.1 MGP_LPJ_G0021868.1 mouse_genomes_project 15 76055598 76061295 - MGP_LPJ_P0041135 Tsta3 protein_coding unknown_likely_coding MGP_LPJ_T0041857.1 MGP_LPJ_G0022071.1 mouse_genomes_project 15 84767963 84969127 - MGP_LPJ_P0041857 Efcab6 protein_coding unknown_likely_coding MGP_LPJ_T0041858.1 MGP_LPJ_G0022071.1 mouse_genomes_project 15 84767969 84979955 - MGP_LPJ_P0041858 Efcab6 protein_coding protein_coding MGP_LPJ_T0041859.1 MGP_LPJ_G0022071.1 mouse_genomes_project 15 84767971 84821971 - Efcab6 protein_coding processed_transcript MGP_LPJ_T0041860.1 MGP_LPJ_G0022071.1 mouse_genomes_project 15 84768024 84840956 - Efcab6 protein_coding retained_intron MGP_LPJ_T0041861.1 MGP_LPJ_G0022071.1 mouse_genomes_project 15 84773632 84784882 - Efcab6 protein_coding processed_transcript MGP_LPJ_T0041862.1 MGP_LPJ_G0022071.1 mouse_genomes_project 15 84827612 84851467 - MGP_LPJ_P0041862 Efcab6 protein_coding nonsense_mediated_decay MGP_LPJ_T0041863.1 MGP_LPJ_G0022071.1 mouse_genomes_project 15 84871853 84874498 - Efcab6 protein_coding processed_transcript MGP_LPJ_T0041864.1 MGP_LPJ_G0022071.1 mouse_genomes_project 15 84879137 84895631 - Efcab6 protein_coding processed_transcript MGP_LPJ_T0041865.1 MGP_LPJ_G0022071.1 mouse_genomes_project 15 84928536 84979985 - Efcab6 protein_coding processed_transcript MGP_LPJ_T0003634.1 MGP_LPJ_G0003294.1 mouse_genomes_project 15 87292256 87293681 + Gm15569 antisense antisense MGP_LPJ_T0099129.1 MGP_LPJ_G0037392.1 mouse_genomes_project 15 76181162 76181320 + Gm23027 snRNA snRNA MGP_LPJ_T0042159.1 MGP_LPJ_G0022159.1 mouse_genomes_project 15 96111031 96131642 - MGP_LPJ_P0042159 Pus7l protein_coding protein_coding MGP_LPJ_T0042160.1 MGP_LPJ_G0022159.1 mouse_genomes_project 15 96124270 96131588 - Pus7l protein_coding retained_intron MGP_LPJ_T0042161.1 MGP_LPJ_G0022159.1 mouse_genomes_project 15 96128844 96131581 - MGP_LPJ_P0042161 Pus7l protein_coding protein_coding MGP_LPJ_T0006757.1 MGP_LPJ_G0005585.1 mouse_genomes_project 15 7771879 7778273 + 4930556M19Rik lincRNA lincRNA MGP_LPJ_T0010107.1 MGP_LPJ_G0008225.1 mouse_genomes_project 15 102787116 102787183 - Mir6961 miRNA miRNA MGP_LPJ_T0003651.1 MGP_LPJ_G0003308.1 mouse_genomes_project 15 102727423 102730151 + Gm27209 antisense antisense MGP_LPJ_T0040542.1 MGP_LPJ_G0021660.1 mouse_genomes_project 15 25542943 25568060 - MGP_LPJ_P0040542 Otulin protein_coding protein_coding MGP_LPJ_T0010065.1 MGP_LPJ_G0008183.1 mouse_genomes_project 15 76367967 76368030 - Mir1942 miRNA miRNA MGP_LPJ_T0011413.1 MGP_LPJ_G0009531.1 mouse_genomes_project 15 99726173 99726484 + Gm22202 misc_RNA misc_RNA MGP_LPJ_T0040767.1 MGP_LPJ_G0021747.1 mouse_genomes_project 15 51838931 52153946 - MGP_LPJ_P0040767 Ext1 protein_coding protein_coding MGP_LPJ_T0040768.1 MGP_LPJ_G0021747.1 mouse_genomes_project 15 51843558 52153446 - MGP_LPJ_P0040768 Ext1 protein_coding nonsense_mediated_decay MGP_LPJ_T0040769.1 MGP_LPJ_G0021747.1 mouse_genomes_project 15 51857836 51990628 - MGP_LPJ_P0040769 Ext1 protein_coding protein_coding MGP_LPJ_T0040770.1 MGP_LPJ_G0021747.1 mouse_genomes_project 15 51864265 51883272 - Ext1 protein_coding retained_intron MGP_LPJ_T0013071.1 MGP_LPJ_G0011162.1 mouse_genomes_project 15 52874422 52875899 - processed_pseudogene processed_pseudogene MGP_LPJ_T0040966.1 MGP_LPJ_G0021813.1 mouse_genomes_project 15 66530391 66600625 - MGP_LPJ_P0040966 St3gal1 protein_coding unknown_likely_coding MGP_LPJ_T0010096.1 MGP_LPJ_G0008214.1 mouse_genomes_project 15 86774784 86774879 + Mirlet7c-2 miRNA miRNA MGP_LPJ_T0040978.1 MGP_LPJ_G0021818.1 mouse_genomes_project 15 72232592 72270631 - MGP_LPJ_P0040978 Kcnk9 protein_coding protein_coding MGP_LPJ_T0013054.1 MGP_LPJ_G0011145.1 mouse_genomes_project 15 15684183 15685690 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013046.1 MGP_LPJ_G0011137.1 mouse_genomes_project 15 4276431 4277034 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101896.1 MGP_LPJ_G0039933.1 mouse_genomes_project 15 75294265 75298419 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0042664.1 MGP_LPJ_G0022330.1 mouse_genomes_project 15 105338136 105387575 + Hoxc5 protein_coding processed_transcript MGP_LPJ_T0042672.1 MGP_LPJ_G0022330.1 mouse_genomes_project 15 105385713 105389328 + MGP_LPJ_P0042672 Hoxc5 protein_coding protein_coding MGP_LPJ_T0042333.1 MGP_LPJ_G0022222.1 mouse_genomes_project 15 101031837 101039325 + Dnajc22 protein_coding processed_transcript MGP_LPJ_T0042334.1 MGP_LPJ_G0022222.1 mouse_genomes_project 15 101037817 101044251 + MGP_LPJ_P0042334 Dnajc22 protein_coding protein_coding MGP_LPJ_T0010069.1 MGP_LPJ_G0008187.1 mouse_genomes_project 15 78691625 78691687 - Mir7676-1 miRNA miRNA MGP_LPJ_T0100374.1 MGP_LPJ_G0038637.1 mouse_genomes_project 15 28073097 28073166 - Gm23327 snoRNA snoRNA MGP_LPJ_T0041838.1 MGP_LPJ_G0022067.1 mouse_genomes_project 15 84447864 84458443 + MGP_LPJ_P0041838 Tspo protein_coding protein_coding MGP_LPJ_T0013049.1 MGP_LPJ_G0011140.1 mouse_genomes_project 15 5947066 5955126 - processed_pseudogene processed_pseudogene MGP_LPJ_T0040502.1 MGP_LPJ_G0021647.1 mouse_genomes_project 15 16348513 16567071 + MGP_LPJ_P0040502 Cdh10 protein_coding protein_coding MGP_LPJ_T0040503.1 MGP_LPJ_G0021647.1 mouse_genomes_project 15 16348524 16433071 + Cdh10 protein_coding retained_intron MGP_LPJ_T0040504.1 MGP_LPJ_G0021647.1 mouse_genomes_project 15 16348543 16506432 + Cdh10 protein_coding retained_intron MGP_LPJ_T0040505.1 MGP_LPJ_G0021647.1 mouse_genomes_project 15 16349897 16567071 + MGP_LPJ_P0040505 Cdh10 protein_coding protein_coding MGP_LPJ_T0040506.1 MGP_LPJ_G0021647.1 mouse_genomes_project 15 16429552 16566518 + MGP_LPJ_P0040506 Cdh10 protein_coding nonsense_mediated_decay MGP_LPJ_T0040507.1 MGP_LPJ_G0021647.1 mouse_genomes_project 15 16552873 16567071 + Cdh10 protein_coding retained_intron MGP_LPJ_T0010052.1 MGP_LPJ_G0008170.1 mouse_genomes_project 15 35691634 35691760 - Gm23654 miRNA miRNA MGP_LPJ_T0042538.1 MGP_LPJ_G0022290.1 mouse_genomes_project 15 104094328 104101634 - MGP_LPJ_P0042538 Krt2 protein_coding protein_coding MGP_LPJ_T0041396.1 MGP_LPJ_G0021934.1 mouse_genomes_project 15 78274092 78290297 - MGP_LPJ_P0041396 Foxred2 protein_coding protein_coding MGP_LPJ_T0041397.1 MGP_LPJ_G0021934.1 mouse_genomes_project 15 78274096 78279460 - Foxred2 protein_coding retained_intron MGP_LPJ_T0041398.1 MGP_LPJ_G0021934.1 mouse_genomes_project 15 78274590 78290250 - MGP_LPJ_P0041398 Foxred2 protein_coding protein_coding MGP_LPJ_T0041399.1 MGP_LPJ_G0021934.1 mouse_genomes_project 15 78286331 78290258 - Foxred2 protein_coding retained_intron MGP_LPJ_T0041886.1 MGP_LPJ_G0022080.1 mouse_genomes_project 15 85644540 85666558 + MGP_LPJ_P0041886 Prr5 protein_coding protein_coding MGP_LPJ_T0041373.1 MGP_LPJ_G0021926.1 mouse_genomes_project 15 77629704 77640311 - MGP_LPJ_P0041373 protein_coding protein_coding MGP_LPJ_T0041836.1 MGP_LPJ_G0022065.1 mouse_genomes_project 15 84407018 84426821 + MGP_LPJ_P0041836 Bik protein_coding protein_coding MGP_LPJ_T0010064.1 MGP_LPJ_G0008182.1 mouse_genomes_project 15 76209646 76209707 - Mir6952 miRNA miRNA MGP_LPJ_T0041678.1 MGP_LPJ_G0022015.1 mouse_genomes_project 15 82181242 82184239 + Ep300 protein_coding processed_transcript MGP_LPJ_T0041679.1 MGP_LPJ_G0022015.1 mouse_genomes_project 15 82181288 82251813 + MGP_LPJ_P0041679 Ep300 protein_coding protein_coding MGP_LPJ_T0041680.1 MGP_LPJ_G0022015.1 mouse_genomes_project 15 82182111 82220117 + Ep300 protein_coding retained_intron MGP_LPJ_T0041681.1 MGP_LPJ_G0022015.1 mouse_genomes_project 15 82209231 82219417 + MGP_LPJ_P0041681 Ep300 protein_coding protein_coding MGP_LPJ_T0041682.1 MGP_LPJ_G0022015.1 mouse_genomes_project 15 82209249 82212441 + Ep300 protein_coding retained_intron MGP_LPJ_T0041683.1 MGP_LPJ_G0022015.1 mouse_genomes_project 15 82216960 82222352 + MGP_LPJ_P0041683 Ep300 protein_coding protein_coding MGP_LPJ_T0041684.1 MGP_LPJ_G0022015.1 mouse_genomes_project 15 82222278 82223762 + MGP_LPJ_P0041684 Ep300 protein_coding protein_coding MGP_LPJ_T0041685.1 MGP_LPJ_G0022015.1 mouse_genomes_project 15 82230364 82236915 + Ep300 protein_coding retained_intron MGP_LPJ_T0041686.1 MGP_LPJ_G0022015.1 mouse_genomes_project 15 82232533 82242287 + Ep300 protein_coding retained_intron MGP_LPJ_T0041687.1 MGP_LPJ_G0022015.1 mouse_genomes_project 15 82242531 82246864 + Ep300 protein_coding retained_intron MGP_LPJ_T0013089.1 MGP_LPJ_G0011180.1 mouse_genomes_project 15 81509106 81509501 + processed_pseudogene processed_pseudogene MGP_LPJ_T0042123.1 MGP_LPJ_G0022150.1 mouse_genomes_project 15 93305148 93350436 + MGP_LPJ_P0042123 Smgc protein_coding protein_coding MGP_LPJ_T0042124.1 MGP_LPJ_G0022150.1 mouse_genomes_project 15 93305211 93350806 + MGP_LPJ_P0042124 Smgc protein_coding protein_coding MGP_LPJ_T0042125.1 MGP_LPJ_G0022150.1 mouse_genomes_project 15 93305211 93350805 + MGP_LPJ_P0042125 Smgc protein_coding protein_coding MGP_LPJ_T0042126.1 MGP_LPJ_G0022150.1 mouse_genomes_project 15 93305211 93350806 + MGP_LPJ_P0042126 Smgc protein_coding protein_coding MGP_LPJ_T0042127.1 MGP_LPJ_G0022150.1 mouse_genomes_project 15 93305219 93312428 + MGP_LPJ_P0042127 Smgc protein_coding protein_coding MGP_LPJ_T0042128.1 MGP_LPJ_G0022150.1 mouse_genomes_project 15 93308309 93350807 + MGP_LPJ_P0042128 Smgc protein_coding protein_coding MGP_LPJ_T0042129.1 MGP_LPJ_G0022150.1 mouse_genomes_project 15 93311243 93350809 + MGP_LPJ_P0042129 Smgc protein_coding protein_coding MGP_LPJ_T0042130.1 MGP_LPJ_G0022150.1 mouse_genomes_project 15 93312342 93350809 + MGP_LPJ_P0042130 Smgc protein_coding protein_coding MGP_LPJ_T0040576.1 MGP_LPJ_G0021677.1 mouse_genomes_project 15 31309870 31801389 + MGP_LPJ_P0040576 Cpq protein_coding protein_coding MGP_LPJ_T0041009.1 MGP_LPJ_G0021827.1 mouse_genomes_project 15 73542809 73623219 - MGP_LPJ_P0041009 Mroh5 protein_coding nonsense_mediated_decay MGP_LPJ_T0041010.1 MGP_LPJ_G0021827.1 mouse_genomes_project 15 73563629 73566269 - Mroh5 protein_coding processed_transcript MGP_LPJ_T0041011.1 MGP_LPJ_G0021827.1 mouse_genomes_project 15 73568541 73632036 - MGP_LPJ_P0041011 Mroh5 protein_coding protein_coding MGP_LPJ_T0041012.1 MGP_LPJ_G0021827.1 mouse_genomes_project 15 73569065 73607498 - MGP_LPJ_P0041012 Mroh5 protein_coding protein_coding MGP_LPJ_T0041013.1 MGP_LPJ_G0021827.1 mouse_genomes_project 15 73581476 73632064 - Mroh5 protein_coding retained_intron MGP_LPJ_T0100405.1 MGP_LPJ_G0038668.1 mouse_genomes_project 15 96611902 96612034 - Gm23129 snoRNA snoRNA MGP_LPJ_T0041913.1 MGP_LPJ_G0022092.1 mouse_genomes_project 15 86534662 86544898 - MGP_LPJ_P0041913 7530416G11Rik protein_coding protein_coding MGP_LPJ_T0041232.1 MGP_LPJ_G0021889.1 mouse_genomes_project 15 76512783 76515862 + MGP_LPJ_P0041232 Maf1 protein_coding protein_coding MGP_LPJ_T0041233.1 MGP_LPJ_G0021889.1 mouse_genomes_project 15 76512783 76515863 + MGP_LPJ_P0041233 Maf1 protein_coding protein_coding MGP_LPJ_T0041234.1 MGP_LPJ_G0021889.1 mouse_genomes_project 15 76512795 76515863 + MGP_LPJ_P0041234 Maf1 protein_coding protein_coding MGP_LPJ_T0041235.1 MGP_LPJ_G0021889.1 mouse_genomes_project 15 76512798 76514496 + Maf1 protein_coding retained_intron MGP_LPJ_T0041236.1 MGP_LPJ_G0021889.1 mouse_genomes_project 15 76512816 76513937 + Maf1 protein_coding processed_transcript MGP_LPJ_T0041237.1 MGP_LPJ_G0021889.1 mouse_genomes_project 15 76512816 76515870 + MGP_LPJ_P0041237 Maf1 protein_coding protein_coding MGP_LPJ_T0041238.1 MGP_LPJ_G0021889.1 mouse_genomes_project 15 76512842 76513557 + Maf1 protein_coding retained_intron MGP_LPJ_T0041239.1 MGP_LPJ_G0021889.1 mouse_genomes_project 15 76512898 76514389 + Maf1 protein_coding retained_intron MGP_LPJ_T0041240.1 MGP_LPJ_G0021889.1 mouse_genomes_project 15 76513495 76514676 + MGP_LPJ_P0041240 Maf1 protein_coding protein_coding MGP_LPJ_T0041241.1 MGP_LPJ_G0021889.1 mouse_genomes_project 15 76513523 76514390 + Maf1 protein_coding retained_intron MGP_LPJ_T0041242.1 MGP_LPJ_G0021889.1 mouse_genomes_project 15 76514259 76515481 + Maf1 protein_coding retained_intron MGP_LPJ_T0041243.1 MGP_LPJ_G0021889.1 mouse_genomes_project 15 76514383 76515516 + Maf1 protein_coding retained_intron MGP_LPJ_T0041244.1 MGP_LPJ_G0021889.1 mouse_genomes_project 15 76514590 76515563 + Maf1 protein_coding retained_intron MGP_LPJ_T0041245.1 MGP_LPJ_G0021889.1 mouse_genomes_project 15 76514904 76515605 + MGP_LPJ_P0041245 Maf1 protein_coding protein_coding MGP_LPJ_T0099126.1 MGP_LPJ_G0037389.1 mouse_genomes_project 15 72211436 72211498 - Gm24390 snRNA snRNA MGP_LPJ_T0098180.1 MGP_LPJ_G0036461.1 mouse_genomes_project 15 92999786 92999899 - Gm24647 rRNA rRNA MGP_LPJ_T0041706.1 MGP_LPJ_G0022020.1 mouse_genomes_project 15 82414338 82439553 + MGP_LPJ_P0041706 Tef protein_coding protein_coding MGP_LPJ_T0041707.1 MGP_LPJ_G0022020.1 mouse_genomes_project 15 82414624 82417967 + Tef protein_coding processed_transcript MGP_LPJ_T0041708.1 MGP_LPJ_G0022020.1 mouse_genomes_project 15 82414647 82417272 + Tef protein_coding processed_transcript MGP_LPJ_T0041709.1 MGP_LPJ_G0022020.1 mouse_genomes_project 15 82414654 82429802 + Tef protein_coding retained_intron MGP_LPJ_T0041710.1 MGP_LPJ_G0022020.1 mouse_genomes_project 15 82414743 82417829 + Tef protein_coding processed_transcript MGP_LPJ_T0041711.1 MGP_LPJ_G0022020.1 mouse_genomes_project 15 82422963 82433993 + MGP_LPJ_P0041711 Tef protein_coding protein_coding MGP_LPJ_T0041712.1 MGP_LPJ_G0022020.1 mouse_genomes_project 15 82423331 82439390 + MGP_LPJ_P0041712 Tef protein_coding protein_coding MGP_LPJ_T0041713.1 MGP_LPJ_G0022020.1 mouse_genomes_project 15 82424948 82427999 + MGP_LPJ_P0041713 Tef protein_coding protein_coding MGP_LPJ_T0041714.1 MGP_LPJ_G0022020.1 mouse_genomes_project 15 82433329 82434120 + Tef protein_coding processed_transcript MGP_LPJ_T0041715.1 MGP_LPJ_G0022020.1 mouse_genomes_project 15 82433679 82436471 + Tef protein_coding retained_intron MGP_LPJ_T0041109.1 MGP_LPJ_G0021860.1 mouse_genomes_project 15 75867547 75868627 - MGP_LPJ_P0041109 Mafa protein_coding protein_coding MGP_LPJ_T0041110.1 MGP_LPJ_G0021861.1 mouse_genomes_project 15 75878719 75968754 - MGP_LPJ_P0041110 protein_coding protein_coding MGP_LPJ_T0041111.1 MGP_LPJ_G0021861.1 mouse_genomes_project 15 75879206 75968734 - MGP_LPJ_P0041111 protein_coding unknown_likely_coding MGP_LPJ_T0041164.1 MGP_LPJ_G0021878.1 mouse_genomes_project 15 76262912 76269992 - MGP_LPJ_P0041164 BC024139 protein_coding nonsense_mediated_decay MGP_LPJ_T0041165.1 MGP_LPJ_G0021878.1 mouse_genomes_project 15 76262915 76269938 - MGP_LPJ_P0041165 BC024139 protein_coding protein_coding MGP_LPJ_T0041166.1 MGP_LPJ_G0021878.1 mouse_genomes_project 15 76262916 76269952 - MGP_LPJ_P0041166 BC024139 protein_coding protein_coding MGP_LPJ_T0041167.1 MGP_LPJ_G0021878.1 mouse_genomes_project 15 76266204 76269467 - BC024139 protein_coding processed_transcript MGP_LPJ_T0042194.1 MGP_LPJ_G0022177.1 mouse_genomes_project 15 99488581 99508972 - MGP_LPJ_P0042194 Endou protein_coding protein_coding MGP_LPJ_T0042195.1 MGP_LPJ_G0022177.1 mouse_genomes_project 15 99488581 99498702 - MGP_LPJ_P0042195 Endou protein_coding protein_coding MGP_LPJ_T0010097.1 MGP_LPJ_G0008215.1 mouse_genomes_project 15 86775500 86775585 + Mirlet7b miRNA miRNA MGP_LPJ_T0017402.1 MGP_LPJ_G0015212.1 mouse_genomes_project 15 63448323 63450893 + Gm20717 processed_transcript processed_transcript MGP_LPJ_T0003640.1 MGP_LPJ_G0003298.1 mouse_genomes_project 15 99898496 99900985 + Gm26513 antisense antisense MGP_LPJ_T0099148.1 MGP_LPJ_G0037411.1 mouse_genomes_project 15 101971989 101972124 - Gm23133 snRNA snRNA MGP_LPJ_T0040543.1 MGP_LPJ_G0021661.1 mouse_genomes_project 15 25592728 25619229 - MGP_LPJ_P0040543 Fam105a protein_coding protein_coding MGP_LPJ_T0040544.1 MGP_LPJ_G0021661.1 mouse_genomes_project 15 25594555 25619138 - MGP_LPJ_P0040544 Fam105a protein_coding unknown_likely_coding MGP_LPJ_T0003616.1 MGP_LPJ_G0003281.1 mouse_genomes_project 15 66151387 66156656 - Gm17140 antisense antisense MGP_LPJ_T0042104.1 MGP_LPJ_G0022145.1 mouse_genomes_project 15 92362566 92486910 - MGP_LPJ_P0042104 Kif21a protein_coding protein_coding MGP_LPJ_T0042105.1 MGP_LPJ_G0022145.1 mouse_genomes_project 15 92362566 92486910 - MGP_LPJ_P0042105 Kif21a protein_coding protein_coding MGP_LPJ_T0042106.1 MGP_LPJ_G0022145.1 mouse_genomes_project 15 92362566 92486910 - MGP_LPJ_P0042106 Kif21a protein_coding protein_coding MGP_LPJ_T0042107.1 MGP_LPJ_G0022145.1 mouse_genomes_project 15 92362566 92486910 - MGP_LPJ_P0042107 Kif21a protein_coding protein_coding MGP_LPJ_T0042108.1 MGP_LPJ_G0022145.1 mouse_genomes_project 15 92362566 92486910 - MGP_LPJ_P0042108 Kif21a protein_coding protein_coding MGP_LPJ_T0042109.1 MGP_LPJ_G0022145.1 mouse_genomes_project 15 92362568 92486672 - MGP_LPJ_P0042109 Kif21a protein_coding unknown_likely_coding MGP_LPJ_T0042693.1 MGP_LPJ_G0022341.1 mouse_genomes_project 15 105714476 105741010 - MGP_LPJ_P0042693 Zfp385a protein_coding protein_coding MGP_LPJ_T0042087.1 MGP_LPJ_G0022140.1 mouse_genomes_project 15 90945280 90951527 + MGP_LPJ_P0042087 Acr protein_coding protein_coding MGP_LPJ_T0100378.1 MGP_LPJ_G0038641.1 mouse_genomes_project 15 32325538 32325662 - Gm24500 snoRNA snoRNA MGP_LPJ_T0042529.1 MGP_LPJ_G0022282.1 mouse_genomes_project 15 103819171 103829681 - MGP_LPJ_P0042529 Krt75 protein_coding protein_coding MGP_LPJ_T0042359.1 MGP_LPJ_G0022229.1 mouse_genomes_project 15 101375625 101395073 + MGP_LPJ_P0042359 Tmbim6 protein_coding protein_coding MGP_LPJ_T0042360.1 MGP_LPJ_G0022229.1 mouse_genomes_project 15 101375729 101393658 + MGP_LPJ_P0042360 Tmbim6 protein_coding protein_coding MGP_LPJ_T0042361.1 MGP_LPJ_G0022229.1 mouse_genomes_project 15 101375729 101393560 + MGP_LPJ_P0042361 Tmbim6 protein_coding protein_coding MGP_LPJ_T0042362.1 MGP_LPJ_G0022229.1 mouse_genomes_project 15 101375765 101393515 + MGP_LPJ_P0042362 Tmbim6 protein_coding protein_coding MGP_LPJ_T0042363.1 MGP_LPJ_G0022229.1 mouse_genomes_project 15 101375962 101393559 + MGP_LPJ_P0042363 Tmbim6 protein_coding protein_coding MGP_LPJ_T0042364.1 MGP_LPJ_G0022229.1 mouse_genomes_project 15 101376335 101391701 + MGP_LPJ_P0042364 Tmbim6 protein_coding protein_coding MGP_LPJ_T0042365.1 MGP_LPJ_G0022229.1 mouse_genomes_project 15 101376353 101393634 + MGP_LPJ_P0042365 Tmbim6 protein_coding protein_coding MGP_LPJ_T0042366.1 MGP_LPJ_G0022229.1 mouse_genomes_project 15 101386110 101387128 + MGP_LPJ_P0042366 Tmbim6 protein_coding protein_coding MGP_LPJ_T0042367.1 MGP_LPJ_G0022229.1 mouse_genomes_project 15 101390897 101393815 + Tmbim6 protein_coding retained_intron MGP_LPJ_T0041893.1 MGP_LPJ_G0022082.1 mouse_genomes_project 15 85745489 85817129 - MGP_LPJ_P0041893 Phf21b protein_coding protein_coding MGP_LPJ_T0041894.1 MGP_LPJ_G0022082.1 mouse_genomes_project 15 85745490 85747560 - Phf21b protein_coding processed_transcript MGP_LPJ_T0041895.1 MGP_LPJ_G0022082.1 mouse_genomes_project 15 85745492 85818068 - MGP_LPJ_P0041895 Phf21b protein_coding protein_coding MGP_LPJ_T0041896.1 MGP_LPJ_G0022082.1 mouse_genomes_project 15 85746241 85817770 - MGP_LPJ_P0041896 Phf21b protein_coding nonsense_mediated_decay MGP_LPJ_T0041897.1 MGP_LPJ_G0022082.1 mouse_genomes_project 15 85747481 85751559 - Phf21b protein_coding retained_intron MGP_LPJ_T0041898.1 MGP_LPJ_G0022082.1 mouse_genomes_project 15 85754615 85764282 - Phf21b protein_coding retained_intron MGP_LPJ_T0042318.1 MGP_LPJ_G0022215.1 mouse_genomes_project 15 100792607 100796236 - MGP_LPJ_P0042318 Rhebl1 protein_coding protein_coding MGP_LPJ_T0042319.1 MGP_LPJ_G0022215.1 mouse_genomes_project 15 100792875 100795922 - Rhebl1 protein_coding processed_transcript MGP_LPJ_T0042320.1 MGP_LPJ_G0022215.1 mouse_genomes_project 15 100794362 100795578 - Rhebl1 protein_coding retained_intron MGP_LPJ_T0042694.1 MGP_LPJ_G0022342.1 mouse_genomes_project 15 105745208 105785768 - MGP_LPJ_P0042694 Itga5 protein_coding protein_coding MGP_LPJ_T0042294.1 MGP_LPJ_G0022205.1 mouse_genomes_project 15 100544271 100561769 - MGP_LPJ_P0042294 Ddx23 protein_coding protein_coding MGP_LPJ_T0042295.1 MGP_LPJ_G0022205.1 mouse_genomes_project 15 100547120 100561764 - Ddx23 protein_coding retained_intron MGP_LPJ_T0042296.1 MGP_LPJ_G0022205.1 mouse_genomes_project 15 100547132 100561761 - Ddx23 protein_coding retained_intron MGP_LPJ_T0042297.1 MGP_LPJ_G0022205.1 mouse_genomes_project 15 100551132 100561764 - Ddx23 protein_coding retained_intron MGP_LPJ_T0042298.1 MGP_LPJ_G0022205.1 mouse_genomes_project 15 100555592 100561738 - MGP_LPJ_P0042298 Ddx23 protein_coding protein_coding MGP_LPJ_T0042299.1 MGP_LPJ_G0022205.1 mouse_genomes_project 15 100556806 100561769 - Ddx23 protein_coding retained_intron MGP_LPJ_T0099136.1 MGP_LPJ_G0037399.1 mouse_genomes_project 15 82188123 82188230 + Gm22067 snRNA snRNA MGP_LPJ_T0041961.1 MGP_LPJ_G0022107.1 mouse_genomes_project 15 90050232 90073075 + protein_coding processed_transcript MGP_LPJ_T0041555.1 MGP_LPJ_G0021984.1 mouse_genomes_project 15 80206280 80227373 - Sun2 protein_coding retained_intron MGP_LPJ_T0041556.1 MGP_LPJ_G0021984.1 mouse_genomes_project 15 80206280 80227451 - MGP_LPJ_P0041556 Sun2 protein_coding protein_coding MGP_LPJ_T0041557.1 MGP_LPJ_G0021984.1 mouse_genomes_project 15 80206281 80227421 - MGP_LPJ_P0041557 Sun2 protein_coding protein_coding MGP_LPJ_T0041558.1 MGP_LPJ_G0021984.1 mouse_genomes_project 15 80206283 80227453 - MGP_LPJ_P0041558 Sun2 protein_coding protein_coding MGP_LPJ_T0041559.1 MGP_LPJ_G0021984.1 mouse_genomes_project 15 80211824 80227421 - Sun2 protein_coding retained_intron MGP_LPJ_T0041560.1 MGP_LPJ_G0021984.1 mouse_genomes_project 15 80217554 80219398 - Sun2 protein_coding retained_intron MGP_LPJ_T0041561.1 MGP_LPJ_G0021984.1 mouse_genomes_project 15 80223566 80227032 - MGP_LPJ_P0041561 Sun2 protein_coding protein_coding MGP_LPJ_T0041562.1 MGP_LPJ_G0021984.1 mouse_genomes_project 15 80224648 80227020 - MGP_LPJ_P0041562 Sun2 protein_coding protein_coding MGP_LPJ_T0041563.1 MGP_LPJ_G0021984.1 mouse_genomes_project 15 80224755 80227009 - MGP_LPJ_P0041563 Sun2 protein_coding protein_coding MGP_LPJ_T0042139.1 MGP_LPJ_G0022154.1 mouse_genomes_project 15 94799076 94859188 - MGP_LPJ_P0042139 Yaf2 protein_coding protein_coding MGP_LPJ_T0042140.1 MGP_LPJ_G0022154.1 mouse_genomes_project 15 94799079 94859315 - Yaf2 protein_coding processed_transcript MGP_LPJ_T0017412.1 MGP_LPJ_G0015220.1 mouse_genomes_project 15 80224490 80226715 + Gm16575 processed_transcript processed_transcript MGP_LPJ_T0100370.1 MGP_LPJ_G0038633.1 mouse_genomes_project 15 20880474 20880606 + Gm24656 snoRNA snoRNA MGP_LPJ_T0100379.1 MGP_LPJ_G0038642.1 mouse_genomes_project 15 32475441 32475492 - Gm25809 snoRNA snoRNA MGP_LPJ_T0040683.1 MGP_LPJ_G0021710.1 mouse_genomes_project 15 36575324 36582872 + MGP_LPJ_P0040683 Odf1 protein_coding protein_coding MGP_LPJ_T0010101.1 MGP_LPJ_G0008219.1 mouse_genomes_project 15 90518561 90518634 - Mir6958 miRNA miRNA MGP_LPJ_T0042395.1 MGP_LPJ_G0022240.1 mouse_genomes_project 15 101738658 101746380 + MGP_LPJ_P0042395 Gpd1 protein_coding protein_coding MGP_LPJ_T0042396.1 MGP_LPJ_G0022240.1 mouse_genomes_project 15 101738722 101745167 + MGP_LPJ_P0042396 Gpd1 protein_coding protein_coding MGP_LPJ_T0042397.1 MGP_LPJ_G0022240.1 mouse_genomes_project 15 101741406 101743457 + Gpd1 protein_coding retained_intron MGP_LPJ_T0042141.1 MGP_LPJ_G0022155.1 mouse_genomes_project 15 94907654 94919847 - MGP_LPJ_P0042141 Zcrb1 protein_coding protein_coding MGP_LPJ_T0042142.1 MGP_LPJ_G0022155.1 mouse_genomes_project 15 94907663 94919880 - MGP_LPJ_P0042142 Zcrb1 protein_coding protein_coding MGP_LPJ_T0042143.1 MGP_LPJ_G0022155.1 mouse_genomes_project 15 94907667 94912740 - Zcrb1 protein_coding retained_intron MGP_LPJ_T0042144.1 MGP_LPJ_G0022155.1 mouse_genomes_project 15 94907670 94912937 - Zcrb1 protein_coding retained_intron MGP_LPJ_T0042145.1 MGP_LPJ_G0022155.1 mouse_genomes_project 15 94909174 94909702 - Zcrb1 protein_coding retained_intron MGP_LPJ_T0042146.1 MGP_LPJ_G0022155.1 mouse_genomes_project 15 94909306 94913227 - Zcrb1 protein_coding retained_intron MGP_LPJ_T0042147.1 MGP_LPJ_G0022155.1 mouse_genomes_project 15 94909358 94919880 - MGP_LPJ_P0042147 Zcrb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0042148.1 MGP_LPJ_G0022155.1 mouse_genomes_project 15 94915625 94919819 - Zcrb1 protein_coding retained_intron MGP_LPJ_T0041077.1 MGP_LPJ_G0021848.1 mouse_genomes_project 15 74906626 75443672 - MGP_LPJ_P0041077 protein_coding protein_coding MGP_LPJ_T0041084.1 MGP_LPJ_G0021848.1 mouse_genomes_project 15 75443571 75443869 - MGP_LPJ_P0041084 protein_coding protein_coding MGP_LPJ_T0099150.1 MGP_LPJ_G0037413.1 mouse_genomes_project 15 104790775 104790874 + Gm24128 snRNA snRNA MGP_LPJ_T0041881.1 MGP_LPJ_G0022078.1 mouse_genomes_project 15 85321087 85393239 - MGP_LPJ_P0041881 1810041L15Rik protein_coding protein_coding MGP_LPJ_T0041882.1 MGP_LPJ_G0022078.1 mouse_genomes_project 15 85321929 85391542 - MGP_LPJ_P0041882 1810041L15Rik protein_coding protein_coding MGP_LPJ_T0041883.1 MGP_LPJ_G0022078.1 mouse_genomes_project 15 85348324 85391607 - MGP_LPJ_P0041883 1810041L15Rik protein_coding protein_coding MGP_LPJ_T0041884.1 MGP_LPJ_G0022078.1 mouse_genomes_project 15 85359132 85388691 - MGP_LPJ_P0041884 1810041L15Rik protein_coding protein_coding MGP_LPJ_T0000970.1 MGP_LPJ_G0000898.1 mouse_genomes_project 15 62800450 62812181 + TEC TEC MGP_LPJ_T0099110.1 MGP_LPJ_G0037373.1 mouse_genomes_project 15 42816053 42816160 + Gm22392 snRNA snRNA MGP_LPJ_T0040388.1 MGP_LPJ_G0021614.1 mouse_genomes_project 15 6072935 6116019 + Nadk2 protein_coding processed_transcript MGP_LPJ_T0040389.1 MGP_LPJ_G0021614.1 mouse_genomes_project 15 6072935 6116019 + MGP_LPJ_P0040389 Nadk2 protein_coding protein_coding MGP_LPJ_T0040390.1 MGP_LPJ_G0021614.1 mouse_genomes_project 15 6072935 6116019 + MGP_LPJ_P0040390 Nadk2 protein_coding protein_coding MGP_LPJ_T0040391.1 MGP_LPJ_G0021614.1 mouse_genomes_project 15 6073178 6115699 + MGP_LPJ_P0040391 Nadk2 protein_coding unknown_likely_coding MGP_LPJ_T0040392.1 MGP_LPJ_G0021614.1 mouse_genomes_project 15 6073357 6115392 + Nadk2 protein_coding processed_transcript MGP_LPJ_T0040393.1 MGP_LPJ_G0021614.1 mouse_genomes_project 15 6073363 6112705 + Nadk2 protein_coding processed_transcript MGP_LPJ_T0040394.1 MGP_LPJ_G0021614.1 mouse_genomes_project 15 6090660 6112370 + Nadk2 protein_coding processed_transcript MGP_LPJ_T0040395.1 MGP_LPJ_G0021614.1 mouse_genomes_project 15 6105639 6112711 + MGP_LPJ_P0040395 Nadk2 protein_coding protein_coding MGP_LPJ_T0040396.1 MGP_LPJ_G0021614.1 mouse_genomes_project 15 6108487 6112303 + Nadk2 protein_coding retained_intron MGP_LPJ_T0041411.1 MGP_LPJ_G0021940.1 mouse_genomes_project 15 78777613 78788520 - MGP_LPJ_P0041411 Tex33 protein_coding protein_coding MGP_LPJ_T0041412.1 MGP_LPJ_G0021940.1 mouse_genomes_project 15 78777613 78795641 - MGP_LPJ_P0041412 Tex33 protein_coding protein_coding MGP_LPJ_T0041413.1 MGP_LPJ_G0021940.1 mouse_genomes_project 15 78777613 78795641 - MGP_LPJ_P0041413 Tex33 protein_coding protein_coding MGP_LPJ_T0042178.1 MGP_LPJ_G0022168.1 mouse_genomes_project 15 97983759 98053473 + MGP_LPJ_P0042178 Arid2 protein_coding protein_coding MGP_LPJ_T0042179.1 MGP_LPJ_G0022168.1 mouse_genomes_project 15 97983814 98109327 + MGP_LPJ_P0042179 Arid2 protein_coding protein_coding MGP_LPJ_T0042180.1 MGP_LPJ_G0022168.1 mouse_genomes_project 15 98058274 98061249 + Arid2 protein_coding retained_intron MGP_LPJ_T0042181.1 MGP_LPJ_G0022168.1 mouse_genomes_project 15 98074236 98107936 + Arid2 protein_coding retained_intron MGP_LPJ_T0041843.1 MGP_LPJ_G0022069.1 mouse_genomes_project 15 84487583 84616561 - MGP_LPJ_P0041843 Scube1 protein_coding protein_coding MGP_LPJ_T0041844.1 MGP_LPJ_G0022069.1 mouse_genomes_project 15 84489987 84616561 - Scube1 protein_coding retained_intron MGP_LPJ_T0041845.1 MGP_LPJ_G0022069.1 mouse_genomes_project 15 84489991 84616561 - MGP_LPJ_P0041845 Scube1 protein_coding protein_coding MGP_LPJ_T0041846.1 MGP_LPJ_G0022069.1 mouse_genomes_project 15 84491494 84616561 - MGP_LPJ_P0041846 Scube1 protein_coding protein_coding MGP_LPJ_T0041847.1 MGP_LPJ_G0022069.1 mouse_genomes_project 15 84491494 84616561 - MGP_LPJ_P0041847 Scube1 protein_coding protein_coding MGP_LPJ_T0041702.1 MGP_LPJ_G0022018.1 mouse_genomes_project 15 82309253 82336956 - MGP_LPJ_P0041702 Rangap1 protein_coding protein_coding MGP_LPJ_T0041703.1 MGP_LPJ_G0022018.1 mouse_genomes_project 15 82309253 82336956 - MGP_LPJ_P0041703 Rangap1 protein_coding protein_coding MGP_LPJ_T0041704.1 MGP_LPJ_G0022018.1 mouse_genomes_project 15 82309623 82336903 - MGP_LPJ_P0041704 Rangap1 protein_coding protein_coding MGP_LPJ_T0041568.1 MGP_LPJ_G0021986.1 mouse_genomes_project 15 80271517 80289846 - MGP_LPJ_P0041568 Nptxr protein_coding protein_coding MGP_LPJ_T0041569.1 MGP_LPJ_G0021986.1 mouse_genomes_project 15 80271518 80289903 - MGP_LPJ_P0041569 Nptxr protein_coding protein_coding MGP_LPJ_T0041570.1 MGP_LPJ_G0021986.1 mouse_genomes_project 15 80274430 80276166 - Nptxr protein_coding processed_transcript MGP_LPJ_T0017386.1 MGP_LPJ_G0015207.1 mouse_genomes_project 15 16219964 16348351 - C030047K22Rik processed_transcript processed_transcript MGP_LPJ_T0041966.1 MGP_LPJ_G0022109.1 mouse_genomes_project 15 90130773 90137805 + MGP_LPJ_P0041966 Creld2 protein_coding protein_coding MGP_LPJ_T0042499.1 MGP_LPJ_G0022268.1 mouse_genomes_project 15 103307676 103327916 + MGP_LPJ_P0042499 Acvrl1 protein_coding protein_coding MGP_LPJ_T0042500.1 MGP_LPJ_G0022268.1 mouse_genomes_project 15 103307691 103315190 + MGP_LPJ_P0042500 Acvrl1 protein_coding protein_coding MGP_LPJ_T0042501.1 MGP_LPJ_G0022268.1 mouse_genomes_project 15 103307705 103325115 + MGP_LPJ_P0042501 Acvrl1 protein_coding protein_coding MGP_LPJ_T0042502.1 MGP_LPJ_G0022268.1 mouse_genomes_project 15 103307705 103315810 + MGP_LPJ_P0042502 Acvrl1 protein_coding protein_coding MGP_LPJ_T0042503.1 MGP_LPJ_G0022268.1 mouse_genomes_project 15 103307728 103325114 + MGP_LPJ_P0042503 Acvrl1 protein_coding protein_coding MGP_LPJ_T0042504.1 MGP_LPJ_G0022268.1 mouse_genomes_project 15 103308076 103325116 + MGP_LPJ_P0042504 Acvrl1 protein_coding protein_coding MGP_LPJ_T0042505.1 MGP_LPJ_G0022268.1 mouse_genomes_project 15 103308078 103325114 + MGP_LPJ_P0042505 Acvrl1 protein_coding protein_coding MGP_LPJ_T0042506.1 MGP_LPJ_G0022268.1 mouse_genomes_project 15 103313911 103315961 + MGP_LPJ_P0042506 Acvrl1 protein_coding protein_coding MGP_LPJ_T0042507.1 MGP_LPJ_G0022268.1 mouse_genomes_project 15 103314628 103327916 + MGP_LPJ_P0042507 Acvrl1 protein_coding protein_coding MGP_LPJ_T0042508.1 MGP_LPJ_G0022268.1 mouse_genomes_project 15 103315175 103324953 + MGP_LPJ_P0042508 Acvrl1 protein_coding unknown_likely_coding MGP_LPJ_T0042509.1 MGP_LPJ_G0022268.1 mouse_genomes_project 15 103316146 103317346 + Acvrl1 protein_coding retained_intron MGP_LPJ_T0042510.1 MGP_LPJ_G0022268.1 mouse_genomes_project 15 103317913 103323871 + Acvrl1 protein_coding processed_transcript MGP_LPJ_T0042265.1 MGP_LPJ_G0022194.1 mouse_genomes_project 15 100238292 100239394 - MGP_LPJ_P0042265 Olfr283 protein_coding protein_coding MGP_LPJ_T0011405.1 MGP_LPJ_G0009523.1 mouse_genomes_project 15 61311053 61311252 + Gm27782 misc_RNA misc_RNA MGP_LPJ_T0003606.1 MGP_LPJ_G0003273.1 mouse_genomes_project 15 35540829 35542068 - Gm16136 antisense antisense MGP_LPJ_T0003607.1 MGP_LPJ_G0003273.1 mouse_genomes_project 15 35540847 35542218 - Gm16136 antisense antisense MGP_LPJ_T0003608.1 MGP_LPJ_G0003273.1 mouse_genomes_project 15 35541563 35542050 - Gm16136 antisense antisense MGP_LPJ_T0040409.1 MGP_LPJ_G0021620.1 mouse_genomes_project 15 6517026 6549976 - MGP_LPJ_P0040409 Il7r protein_coding protein_coding MGP_LPJ_T0000962.1 MGP_LPJ_G0000890.1 mouse_genomes_project 15 3923492 3929964 + TEC TEC MGP_LPJ_T0042032.1 MGP_LPJ_G0022125.1 mouse_genomes_project 15 90669330 90671087 + MGP_LPJ_P0042032 Adm2 protein_coding protein_coding MGP_LPJ_T0042110.1 MGP_LPJ_G0022146.1 mouse_genomes_project 15 92560875 92609121 - MGP_LPJ_P0042110 Abcd2 protein_coding protein_coding MGP_LPJ_T0042055.1 MGP_LPJ_G0022131.1 mouse_genomes_project 15 90726715 90728519 - MGP_LPJ_P0042055 Odf3b protein_coding protein_coding MGP_LPJ_T0042056.1 MGP_LPJ_G0022131.1 mouse_genomes_project 15 90726771 90728443 - MGP_LPJ_P0042056 Odf3b protein_coding unknown_likely_coding MGP_LPJ_T0042260.1 MGP_LPJ_G0022191.1 mouse_genomes_project 15 100114938 100125495 - MGP_LPJ_P0042260 Zfp641 protein_coding protein_coding MGP_LPJ_T0042261.1 MGP_LPJ_G0022191.1 mouse_genomes_project 15 100115471 100125448 - MGP_LPJ_P0042261 Zfp641 protein_coding protein_coding MGP_LPJ_T0041437.1 MGP_LPJ_G0021951.1 mouse_genomes_project 15 79180057 79197614 - MGP_LPJ_P0041437 Mfng protein_coding protein_coding MGP_LPJ_T0041438.1 MGP_LPJ_G0021951.1 mouse_genomes_project 15 79184666 79191333 - Mfng protein_coding retained_intron MGP_LPJ_T0041439.1 MGP_LPJ_G0021951.1 mouse_genomes_project 15 79188042 79191307 - Mfng protein_coding retained_intron MGP_LPJ_T0041440.1 MGP_LPJ_G0021951.1 mouse_genomes_project 15 79191008 79196035 - Mfng protein_coding processed_transcript MGP_LPJ_T0099139.1 MGP_LPJ_G0037402.1 mouse_genomes_project 15 87320693 87320797 - Gm22818 snRNA snRNA MGP_LPJ_T0006829.1 MGP_LPJ_G0005631.1 mouse_genomes_project 15 104592722 104596288 + lincRNA lincRNA MGP_LPJ_T0042457.1 MGP_LPJ_G0022260.1 mouse_genomes_project 15 102760431 102775982 - MGP_LPJ_P0042457 Smagp protein_coding protein_coding MGP_LPJ_T0042458.1 MGP_LPJ_G0022260.1 mouse_genomes_project 15 102760431 102775972 - MGP_LPJ_P0042458 Smagp protein_coding protein_coding MGP_LPJ_T0040721.1 MGP_LPJ_G0021726.1 mouse_genomes_project 15 40222502 40226912 - MGP_LPJ_P0040721 Abra protein_coding protein_coding MGP_LPJ_T0040535.1 MGP_LPJ_G0021657.1 mouse_genomes_project 15 24188575 24191897 + March11 protein_coding retained_intron MGP_LPJ_T0040536.1 MGP_LPJ_G0021657.1 mouse_genomes_project 15 24188591 24304517 + MGP_LPJ_P0040536 March11 protein_coding protein_coding MGP_LPJ_T0040537.1 MGP_LPJ_G0021657.1 mouse_genomes_project 15 24188591 24304517 + MGP_LPJ_P0040537 March11 protein_coding protein_coding MGP_LPJ_T0040538.1 MGP_LPJ_G0021657.1 mouse_genomes_project 15 24281146 24304517 + March11 protein_coding retained_intron MGP_LPJ_T0010095.1 MGP_LPJ_G0008213.1 mouse_genomes_project 15 85918621 85918719 - Mir1249 miRNA miRNA MGP_LPJ_T0013045.1 MGP_LPJ_G0011136.1 mouse_genomes_project 15 2053601 2054836 + processed_pseudogene processed_pseudogene MGP_LPJ_T0040630.1 MGP_LPJ_G0021696.1 mouse_genomes_project 15 34461105 34521133 + MGP_LPJ_P0040630 Spag1 protein_coding protein_coding MGP_LPJ_T0040631.1 MGP_LPJ_G0021696.1 mouse_genomes_project 15 34461267 34520684 + MGP_LPJ_P0040631 Spag1 protein_coding protein_coding MGP_LPJ_T0041954.1 MGP_LPJ_G0022105.1 mouse_genomes_project 15 89890050 89891418 + MGP_LPJ_P0041954 Zdhhc25 protein_coding protein_coding MGP_LPJ_T0017415.1 MGP_LPJ_G0015222.1 mouse_genomes_project 15 90404468 90408449 - 1810021B22Rik processed_transcript antisense MGP_LPJ_T0017416.1 MGP_LPJ_G0015222.1 mouse_genomes_project 15 90404468 90407598 - 1810021B22Rik processed_transcript lincRNA MGP_LPJ_T0017417.1 MGP_LPJ_G0015222.1 mouse_genomes_project 15 90404470 90409152 - 1810021B22Rik processed_transcript lincRNA MGP_LPJ_T0017418.1 MGP_LPJ_G0015222.1 mouse_genomes_project 15 90404470 90408511 - 1810021B22Rik processed_transcript antisense MGP_LPJ_T0017419.1 MGP_LPJ_G0015222.1 mouse_genomes_project 15 90404470 90408449 - 1810021B22Rik processed_transcript antisense MGP_LPJ_T0040632.1 MGP_LPJ_G0021697.1 mouse_genomes_project 15 34525444 34572199 - MGP_LPJ_P0040632 Rnf19a protein_coding protein_coding MGP_LPJ_T0041188.1 MGP_LPJ_G0021880.1 mouse_genomes_project 15 76385487 76388037 - MGP_LPJ_P0041188 Parp10 protein_coding nonsense_mediated_decay MGP_LPJ_T0041189.1 MGP_LPJ_G0021880.1 mouse_genomes_project 15 76387316 76400166 - Parp10 protein_coding retained_intron MGP_LPJ_T0041190.1 MGP_LPJ_G0021880.1 mouse_genomes_project 15 76387316 76400152 - MGP_LPJ_P0041190 Parp10 protein_coding protein_coding MGP_LPJ_T0041191.1 MGP_LPJ_G0021880.1 mouse_genomes_project 15 76387316 76400173 - MGP_LPJ_P0041191 Parp10 protein_coding protein_coding MGP_LPJ_T0041192.1 MGP_LPJ_G0021880.1 mouse_genomes_project 15 76387703 76388567 - Parp10 protein_coding processed_transcript MGP_LPJ_T0041193.1 MGP_LPJ_G0021880.1 mouse_genomes_project 15 76388052 76388787 - Parp10 protein_coding retained_intron MGP_LPJ_T0040534.1 MGP_LPJ_G0021656.1 mouse_genomes_project 15 23862267 23876384 + MGP_LPJ_P0040534 Zfp622 protein_coding protein_coding MGP_LPJ_T0042582.1 MGP_LPJ_G0022311.1 mouse_genomes_project 15 104659194 104667140 + MGP_LPJ_P0042582 Myg1 protein_coding protein_coding MGP_LPJ_T0042583.1 MGP_LPJ_G0022311.1 mouse_genomes_project 15 104659205 104660082 + Myg1 protein_coding retained_intron MGP_LPJ_T0042584.1 MGP_LPJ_G0022311.1 mouse_genomes_project 15 104659223 104666797 + Myg1 protein_coding retained_intron MGP_LPJ_T0042585.1 MGP_LPJ_G0022311.1 mouse_genomes_project 15 104659235 104666780 + MGP_LPJ_P0042585 Myg1 protein_coding protein_coding MGP_LPJ_T0042586.1 MGP_LPJ_G0022311.1 mouse_genomes_project 15 104659240 104666692 + MGP_LPJ_P0042586 Myg1 protein_coding protein_coding MGP_LPJ_T0042587.1 MGP_LPJ_G0022311.1 mouse_genomes_project 15 104659402 104666141 + Myg1 protein_coding retained_intron MGP_LPJ_T0042588.1 MGP_LPJ_G0022311.1 mouse_genomes_project 15 104659915 104665802 + Myg1 protein_coding processed_transcript MGP_LPJ_T0042589.1 MGP_LPJ_G0022311.1 mouse_genomes_project 15 104662073 104665826 + Myg1 protein_coding retained_intron MGP_LPJ_T0042590.1 MGP_LPJ_G0022311.1 mouse_genomes_project 15 104665695 104666797 + Myg1 protein_coding retained_intron MGP_LPJ_T0042591.1 MGP_LPJ_G0022311.1 mouse_genomes_project 15 104665978 104666736 + Myg1 protein_coding retained_intron MGP_LPJ_T0041600.1 MGP_LPJ_G0021991.1 mouse_genomes_project 15 80475688 80496833 - MGP_LPJ_P0041600 Pdgfb protein_coding protein_coding MGP_LPJ_T0006773.1 MGP_LPJ_G0005597.1 mouse_genomes_project 15 38781773 38797698 - Gm16294 lincRNA lincRNA MGP_LPJ_T0041791.1 MGP_LPJ_G0022054.1 mouse_genomes_project 15 83556029 83588342 - MGP_LPJ_P0041791 Cyp2d26 protein_coding unknown_likely_coding MGP_LPJ_T0041792.1 MGP_LPJ_G0022054.1 mouse_genomes_project 15 83556427 83588414 - MGP_LPJ_P0041792 Cyp2d26 protein_coding protein_coding MGP_LPJ_T0010118.1 MGP_LPJ_G0008236.1 mouse_genomes_project 15 105751374 105751445 - Mir6963 miRNA miRNA MGP_LPJ_T0042530.1 MGP_LPJ_G0022283.1 mouse_genomes_project 15 103886764 103893941 - MGP_LPJ_P0042530 Gm5414 protein_coding protein_coding MGP_LPJ_T0013059.1 MGP_LPJ_G0011150.1 mouse_genomes_project 15 35480436 35481870 - processed_pseudogene processed_pseudogene MGP_LPJ_T0040863.1 MGP_LPJ_G0021786.1 mouse_genomes_project 15 58402055 58416272 + Sqle protein_coding retained_intron MGP_LPJ_T0040864.1 MGP_LPJ_G0021786.1 mouse_genomes_project 15 58402059 58418501 + MGP_LPJ_P0040864 Sqle protein_coding protein_coding MGP_LPJ_T0040865.1 MGP_LPJ_G0021786.1 mouse_genomes_project 15 58402085 58418501 + MGP_LPJ_P0040865 Sqle protein_coding protein_coding MGP_LPJ_T0040866.1 MGP_LPJ_G0021786.1 mouse_genomes_project 15 58412887 58414513 + Sqle protein_coding retained_intron MGP_LPJ_T0010109.1 MGP_LPJ_G0008227.1 mouse_genomes_project 15 103568889 103568972 + Mir1941 miRNA miRNA MGP_LPJ_T0040634.1 MGP_LPJ_G0021699.1 mouse_genomes_project 15 34799159 34850489 - MGP_LPJ_P0040634 Snx31 protein_coding protein_coding MGP_LPJ_T0040635.1 MGP_LPJ_G0021699.1 mouse_genomes_project 15 34799509 34850484 - MGP_LPJ_P0040635 Snx31 protein_coding protein_coding MGP_LPJ_T0040636.1 MGP_LPJ_G0021699.1 mouse_genomes_project 15 34832154 34841019 - Snx31 protein_coding processed_transcript MGP_LPJ_T0040637.1 MGP_LPJ_G0021699.1 mouse_genomes_project 15 34832154 34841518 - MGP_LPJ_P0040637 Snx31 protein_coding protein_coding MGP_LPJ_T0040989.1 MGP_LPJ_G0021823.1 mouse_genomes_project 15 73275710 73338519 + MGP_LPJ_P0040989 Dennd3 protein_coding protein_coding MGP_LPJ_T0040990.1 MGP_LPJ_G0021823.1 mouse_genomes_project 15 73275822 73338376 + MGP_LPJ_P0040990 Dennd3 protein_coding nonsense_mediated_decay MGP_LPJ_T0040991.1 MGP_LPJ_G0021823.1 mouse_genomes_project 15 73283233 73288165 + Dennd3 protein_coding processed_transcript MGP_LPJ_T0040992.1 MGP_LPJ_G0021823.1 mouse_genomes_project 15 73286961 73337231 + MGP_LPJ_P0040992 Dennd3 protein_coding protein_coding MGP_LPJ_T0040993.1 MGP_LPJ_G0021823.1 mouse_genomes_project 15 73323338 73334384 + MGP_LPJ_P0040993 Dennd3 protein_coding nonsense_mediated_decay MGP_LPJ_T0040994.1 MGP_LPJ_G0021823.1 mouse_genomes_project 15 73331138 73333354 + Dennd3 protein_coding retained_intron MGP_LPJ_T0040995.1 MGP_LPJ_G0021823.1 mouse_genomes_project 15 73333354 73337176 + Dennd3 protein_coding retained_intron MGP_LPJ_T0100397.1 MGP_LPJ_G0038660.1 mouse_genomes_project 15 69223347 69223476 - Gm23987 snoRNA snoRNA MGP_LPJ_T0042706.1 MGP_LPJ_G0022346.1 mouse_genomes_project 15 105920568 105947437 + MGP_LPJ_P0042706 Pde1b protein_coding protein_coding MGP_LPJ_T0042531.1 MGP_LPJ_G0022284.1 mouse_genomes_project 15 103947664 103957413 - MGP_LPJ_P0042531 protein_coding protein_coding MGP_LPJ_T0101897.1 MGP_LPJ_G0039934.1 mouse_genomes_project 15 75327370 75327599 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013080.1 MGP_LPJ_G0011171.1 mouse_genomes_project 15 74560577 74560721 + processed_pseudogene processed_pseudogene MGP_LPJ_T0040516.1 MGP_LPJ_G0021651.1 mouse_genomes_project 15 22987150 22998931 - MGP_LPJ_P0040516 9230109A22Rik protein_coding protein_coding MGP_LPJ_T0040449.1 MGP_LPJ_G0021628.1 mouse_genomes_project 15 7537555 7569664 - MGP_LPJ_P0040449 Ttc23l protein_coding protein_coding MGP_LPJ_T0040450.1 MGP_LPJ_G0021628.1 mouse_genomes_project 15 7541401 7597739 - MGP_LPJ_P0040450 Ttc23l protein_coding protein_coding MGP_LPJ_T0040451.1 MGP_LPJ_G0021628.1 mouse_genomes_project 15 7576765 7597721 - MGP_LPJ_P0040451 Ttc23l protein_coding protein_coding MGP_LPJ_T0042426.1 MGP_LPJ_G0022249.1 mouse_genomes_project 15 102380917 102516434 + MGP_LPJ_P0042426 Methig1 protein_coding protein_coding MGP_LPJ_T0042427.1 MGP_LPJ_G0022249.1 mouse_genomes_project 15 102380934 102516307 + MGP_LPJ_P0042427 Methig1 protein_coding nonsense_mediated_decay MGP_LPJ_T0003615.1 MGP_LPJ_G0003280.1 mouse_genomes_project 15 65675501 65678828 + Gm27242 antisense antisense MGP_LPJ_T0040633.1 MGP_LPJ_G0021698.1 mouse_genomes_project 15 34775500 34791901 - MGP_LPJ_P0040633 Ankrd46 protein_coding protein_coding MGP_LPJ_T0042534.1 MGP_LPJ_G0022287.1 mouse_genomes_project 15 104038116 104046373 - MGP_LPJ_P0042534 Krt74 protein_coding protein_coding MGP_LPJ_T0042513.1 MGP_LPJ_G0022271.1 mouse_genomes_project 15 103457473 103465338 + MGP_LPJ_P0042513 Nr4a1 protein_coding protein_coding MGP_LPJ_T0041194.1 MGP_LPJ_G0021881.1 mouse_genomes_project 15 76403538 76406636 + MGP_LPJ_P0041194 Grina protein_coding protein_coding MGP_LPJ_T0041848.1 MGP_LPJ_G0022070.1 mouse_genomes_project 15 84674464 84688491 + MGP_LPJ_P0041848 Mpped1 protein_coding protein_coding MGP_LPJ_T0041849.1 MGP_LPJ_G0022070.1 mouse_genomes_project 15 84685204 84759888 + MGP_LPJ_P0041849 Mpped1 protein_coding nonsense_mediated_decay MGP_LPJ_T0041850.1 MGP_LPJ_G0022070.1 mouse_genomes_project 15 84688298 84757708 + MGP_LPJ_P0041850 Mpped1 protein_coding protein_coding MGP_LPJ_T0041851.1 MGP_LPJ_G0022070.1 mouse_genomes_project 15 84688373 84757804 + MGP_LPJ_P0041851 Mpped1 protein_coding protein_coding MGP_LPJ_T0041852.1 MGP_LPJ_G0022070.1 mouse_genomes_project 15 84688394 84759882 + MGP_LPJ_P0041852 Mpped1 protein_coding protein_coding MGP_LPJ_T0041853.1 MGP_LPJ_G0022070.1 mouse_genomes_project 15 84694227 84753471 + MGP_LPJ_P0041853 Mpped1 protein_coding protein_coding MGP_LPJ_T0041854.1 MGP_LPJ_G0022070.1 mouse_genomes_project 15 84697683 84757689 + MGP_LPJ_P0041854 Mpped1 protein_coding nonsense_mediated_decay MGP_LPJ_T0041855.1 MGP_LPJ_G0022070.1 mouse_genomes_project 15 84734312 84757709 + MGP_LPJ_P0041855 Mpped1 protein_coding protein_coding MGP_LPJ_T0041856.1 MGP_LPJ_G0022070.1 mouse_genomes_project 15 84734345 84755917 + MGP_LPJ_P0041856 Mpped1 protein_coding protein_coding MGP_LPJ_T0040691.1 MGP_LPJ_G0021713.1 mouse_genomes_project 15 37061609 37095552 + MGP_LPJ_P0040691 Atp6v1c1 protein_coding protein_coding MGP_LPJ_T0042275.1 MGP_LPJ_G0022197.1 mouse_genomes_project 15 100324571 100325629 + MGP_LPJ_P0042275 Olfr281 protein_coding protein_coding MGP_LPJ_T0000975.1 MGP_LPJ_G0000903.1 mouse_genomes_project 15 91135572 91135945 + TEC TEC MGP_LPJ_T0099134.1 MGP_LPJ_G0037397.1 mouse_genomes_project 15 80584104 80584211 - Gm24204 snRNA snRNA MGP_LPJ_T0006794.1 MGP_LPJ_G0005606.1 mouse_genomes_project 15 66654297 66804029 + lincRNA lincRNA MGP_LPJ_T0042276.1 MGP_LPJ_G0022198.1 mouse_genomes_project 15 100350815 100353147 - MGP_LPJ_P0042276 Lalba protein_coding protein_coding MGP_LPJ_T0040611.1 MGP_LPJ_G0021689.1 mouse_genomes_project 15 33124352 33417094 - MGP_LPJ_P0040611 Stk3 protein_coding protein_coding MGP_LPJ_T0040612.1 MGP_LPJ_G0021689.1 mouse_genomes_project 15 33124539 33417038 - MGP_LPJ_P0040612 Stk3 protein_coding protein_coding MGP_LPJ_T0040613.1 MGP_LPJ_G0021689.1 mouse_genomes_project 15 33210729 33246234 - Stk3 protein_coding retained_intron MGP_LPJ_T0040614.1 MGP_LPJ_G0021689.1 mouse_genomes_project 15 33336720 33416957 - MGP_LPJ_P0040614 Stk3 protein_coding nonsense_mediated_decay MGP_LPJ_T0041932.1 MGP_LPJ_G0022098.1 mouse_genomes_project 15 86938956 86957503 + MGP_LPJ_P0041932 Gtse1 protein_coding protein_coding MGP_LPJ_T0040795.1 MGP_LPJ_G0021759.1 mouse_genomes_project 15 54191931 54408762 + MGP_LPJ_P0040795 Col14a1 protein_coding protein_coding MGP_LPJ_T0040796.1 MGP_LPJ_G0021759.1 mouse_genomes_project 15 54191931 54408763 + MGP_LPJ_P0040796 Col14a1 protein_coding protein_coding MGP_LPJ_T0040797.1 MGP_LPJ_G0021759.1 mouse_genomes_project 15 54191932 54408761 + MGP_LPJ_P0040797 Col14a1 protein_coding protein_coding MGP_LPJ_T0040798.1 MGP_LPJ_G0021759.1 mouse_genomes_project 15 54331832 54407649 + MGP_LPJ_P0040798 Col14a1 protein_coding protein_coding MGP_LPJ_T0042681.1 MGP_LPJ_G0022338.1 mouse_genomes_project 15 105649070 105656242 - MGP_LPJ_P0042681 Nfe2 protein_coding protein_coding MGP_LPJ_T0042682.1 MGP_LPJ_G0022338.1 mouse_genomes_project 15 105649075 105652274 - MGP_LPJ_P0042682 Nfe2 protein_coding protein_coding MGP_LPJ_T0042683.1 MGP_LPJ_G0022338.1 mouse_genomes_project 15 105649075 105652325 - MGP_LPJ_P0042683 Nfe2 protein_coding protein_coding MGP_LPJ_T0042684.1 MGP_LPJ_G0022338.1 mouse_genomes_project 15 105649078 105652485 - MGP_LPJ_P0042684 Nfe2 protein_coding protein_coding MGP_LPJ_T0042685.1 MGP_LPJ_G0022338.1 mouse_genomes_project 15 105649133 105652324 - MGP_LPJ_P0042685 Nfe2 protein_coding protein_coding MGP_LPJ_T0042686.1 MGP_LPJ_G0022338.1 mouse_genomes_project 15 105649813 105653961 - MGP_LPJ_P0042686 Nfe2 protein_coding protein_coding MGP_LPJ_T0042687.1 MGP_LPJ_G0022338.1 mouse_genomes_project 15 105649865 105654865 - MGP_LPJ_P0042687 Nfe2 protein_coding protein_coding MGP_LPJ_T0042688.1 MGP_LPJ_G0022338.1 mouse_genomes_project 15 105649927 105652496 - MGP_LPJ_P0042688 Nfe2 protein_coding protein_coding MGP_LPJ_T0042689.1 MGP_LPJ_G0022338.1 mouse_genomes_project 15 105650097 105653619 - MGP_LPJ_P0042689 Nfe2 protein_coding protein_coding MGP_LPJ_T0042690.1 MGP_LPJ_G0022338.1 mouse_genomes_project 15 105650207 105659199 - MGP_LPJ_P0042690 Nfe2 protein_coding protein_coding MGP_LPJ_T0040987.1 MGP_LPJ_G0021822.1 mouse_genomes_project 15 72950268 73180227 - MGP_LPJ_P0040987 Ptk2 protein_coding protein_coding MGP_LPJ_T0040988.1 MGP_LPJ_G0021822.1 mouse_genomes_project 15 72960909 73114669 - MGP_LPJ_P0040988 Ptk2 protein_coding protein_coding MGP_LPJ_T0010067.1 MGP_LPJ_G0008185.1 mouse_genomes_project 15 76450078 76450168 - Mir3079 miRNA miRNA MGP_LPJ_T0041134.1 MGP_LPJ_G0021867.1 mouse_genomes_project 15 76047386 76052484 - MGP_LPJ_P0041134 Pycrl protein_coding protein_coding MGP_LPJ_T0041991.1 MGP_LPJ_G0022117.1 mouse_genomes_project 15 90431624 90456354 - MGP_LPJ_P0041991 Tubgcp6 protein_coding protein_coding MGP_LPJ_T0041992.1 MGP_LPJ_G0022117.1 mouse_genomes_project 15 90432365 90434366 - Tubgcp6 protein_coding retained_intron MGP_LPJ_T0041993.1 MGP_LPJ_G0022117.1 mouse_genomes_project 15 90433677 90435871 - MGP_LPJ_P0041993 Tubgcp6 protein_coding nonsense_mediated_decay MGP_LPJ_T0041994.1 MGP_LPJ_G0022117.1 mouse_genomes_project 15 90433677 90456153 - MGP_LPJ_P0041994 Tubgcp6 protein_coding protein_coding MGP_LPJ_T0041995.1 MGP_LPJ_G0022117.1 mouse_genomes_project 15 90433701 90434811 - Tubgcp6 protein_coding retained_intron MGP_LPJ_T0041996.1 MGP_LPJ_G0022117.1 mouse_genomes_project 15 90433960 90434547 - Tubgcp6 protein_coding retained_intron MGP_LPJ_T0041997.1 MGP_LPJ_G0022117.1 mouse_genomes_project 15 90433984 90435282 - MGP_LPJ_P0041997 Tubgcp6 protein_coding nonsense_mediated_decay MGP_LPJ_T0041998.1 MGP_LPJ_G0022117.1 mouse_genomes_project 15 90434279 90435448 - Tubgcp6 protein_coding retained_intron MGP_LPJ_T0041999.1 MGP_LPJ_G0022117.1 mouse_genomes_project 15 90434743 90435640 - MGP_LPJ_P0041999 Tubgcp6 protein_coding nonsense_mediated_decay MGP_LPJ_T0042000.1 MGP_LPJ_G0022117.1 mouse_genomes_project 15 90437483 90440697 - MGP_LPJ_P0042000 Tubgcp6 protein_coding nonsense_mediated_decay MGP_LPJ_T0041625.1 MGP_LPJ_G0022001.1 mouse_genomes_project 15 81159753 81190049 + MGP_LPJ_P0041625 Grap2 protein_coding protein_coding MGP_LPJ_T0040654.1 MGP_LPJ_G0021704.1 mouse_genomes_project 15 35318015 35329109 - MGP_LPJ_P0040654 Zfp706 protein_coding protein_coding MGP_LPJ_T0041899.1 MGP_LPJ_G0022083.1 mouse_genomes_project 15 85876822 85887187 - MGP_LPJ_P0041899 Gm29666 protein_coding protein_coding MGP_LPJ_T0042253.1 MGP_LPJ_G0022187.1 mouse_genomes_project 15 99972931 99975259 + MGP_LPJ_P0042253 Ccdc184 protein_coding protein_coding MGP_LPJ_T0099099.1 MGP_LPJ_G0037362.1 mouse_genomes_project 15 5192532 5192643 + Gm24144 snRNA snRNA MGP_LPJ_T0042636.1 MGP_LPJ_G0022321.1 mouse_genomes_project 15 104867054 104867931 - MGP_LPJ_P0042636 Npff protein_coding protein_coding MGP_LPJ_T0042638.1 MGP_LPJ_G0022321.1 mouse_genomes_project 15 104867061 104868158 - Npff protein_coding retained_intron MGP_LPJ_T0040974.1 MGP_LPJ_G0021817.1 mouse_genomes_project 15 71482121 71734274 - MGP_LPJ_P0040974 Col22a1 protein_coding protein_coding MGP_LPJ_T0040975.1 MGP_LPJ_G0021817.1 mouse_genomes_project 15 71563093 71591801 - MGP_LPJ_P0040975 Col22a1 protein_coding protein_coding MGP_LPJ_T0040976.1 MGP_LPJ_G0021817.1 mouse_genomes_project 15 71598929 71650755 - Col22a1 protein_coding processed_transcript MGP_LPJ_T0040977.1 MGP_LPJ_G0021817.1 mouse_genomes_project 15 71616991 71650780 - MGP_LPJ_P0040977 Col22a1 protein_coding protein_coding MGP_LPJ_T0041161.1 MGP_LPJ_G0021876.1 mouse_genomes_project 15 76215002 76225764 - MGP_LPJ_P0041161 Puf60 protein_coding protein_coding MGP_LPJ_T0041162.1 MGP_LPJ_G0021876.1 mouse_genomes_project 15 76215002 76225764 - MGP_LPJ_P0041162 Puf60 protein_coding protein_coding MGP_LPJ_T0041005.1 MGP_LPJ_G0021826.1 mouse_genomes_project 15 73503474 73540181 + MGP_LPJ_P0041005 Ptp4a3 protein_coding protein_coding MGP_LPJ_T0041006.1 MGP_LPJ_G0021826.1 mouse_genomes_project 15 73503474 73540181 + MGP_LPJ_P0041006 Ptp4a3 protein_coding protein_coding MGP_LPJ_T0041007.1 MGP_LPJ_G0021826.1 mouse_genomes_project 15 73506034 73540181 + MGP_LPJ_P0041007 Ptp4a3 protein_coding protein_coding MGP_LPJ_T0041008.1 MGP_LPJ_G0021826.1 mouse_genomes_project 15 73529440 73540181 + MGP_LPJ_P0041008 Ptp4a3 protein_coding protein_coding MGP_LPJ_T0010098.1 MGP_LPJ_G0008216.1 mouse_genomes_project 15 88250872 88250969 + Gm23416 miRNA miRNA MGP_LPJ_T0042230.1 MGP_LPJ_G0022183.1 mouse_genomes_project 15 99774975 99805456 - MGP_LPJ_P0042230 Col2a1 protein_coding protein_coding MGP_LPJ_T0042231.1 MGP_LPJ_G0022183.1 mouse_genomes_project 15 99774975 99805418 - MGP_LPJ_P0042231 Col2a1 protein_coding protein_coding MGP_LPJ_T0042232.1 MGP_LPJ_G0022183.1 mouse_genomes_project 15 99785676 99788303 - Col2a1 protein_coding retained_intron MGP_LPJ_T0042233.1 MGP_LPJ_G0022183.1 mouse_genomes_project 15 99787492 99789822 - Col2a1 protein_coding processed_transcript MGP_LPJ_T0042234.1 MGP_LPJ_G0022183.1 mouse_genomes_project 15 99794197 99798795 - Col2a1 protein_coding retained_intron MGP_LPJ_T0042235.1 MGP_LPJ_G0022183.1 mouse_genomes_project 15 99794348 99799023 - Col2a1 protein_coding processed_transcript MGP_LPJ_T0042236.1 MGP_LPJ_G0022183.1 mouse_genomes_project 15 99797700 99801217 - Col2a1 protein_coding processed_transcript MGP_LPJ_T0042237.1 MGP_LPJ_G0022183.1 mouse_genomes_project 15 99797907 99805396 - MGP_LPJ_P0042237 Col2a1 protein_coding protein_coding MGP_LPJ_T0042238.1 MGP_LPJ_G0022183.1 mouse_genomes_project 15 99799572 99805418 - Col2a1 protein_coding retained_intron MGP_LPJ_T0000965.1 MGP_LPJ_G0000893.1 mouse_genomes_project 15 9806690 9808971 - TEC TEC MGP_LPJ_T0006769.1 MGP_LPJ_G0005593.1 mouse_genomes_project 15 36599486 36602507 - lincRNA lincRNA MGP_LPJ_T0040724.1 MGP_LPJ_G0021728.1 mouse_genomes_project 15 41393608 41537335 - MGP_LPJ_P0040724 Rspo2 protein_coding unknown_likely_coding MGP_LPJ_T0100393.1 MGP_LPJ_G0038656.1 mouse_genomes_project 15 59851827 59851959 - Gm23835 snoRNA snoRNA MGP_LPJ_T0041669.1 MGP_LPJ_G0022011.1 mouse_genomes_project 15 81980510 82010707 + Xpnpep3 protein_coding retained_intron MGP_LPJ_T0041670.1 MGP_LPJ_G0022011.1 mouse_genomes_project 15 81980530 81997282 + Xpnpep3 protein_coding retained_intron MGP_LPJ_T0041671.1 MGP_LPJ_G0022011.1 mouse_genomes_project 15 81980556 82037274 + MGP_LPJ_P0041671 Xpnpep3 protein_coding nonsense_mediated_decay MGP_LPJ_T0041672.1 MGP_LPJ_G0022011.1 mouse_genomes_project 15 81980557 82021513 + MGP_LPJ_P0041672 Xpnpep3 protein_coding nonsense_mediated_decay MGP_LPJ_T0041673.1 MGP_LPJ_G0022011.1 mouse_genomes_project 15 81980584 82037274 + MGP_LPJ_P0041673 Xpnpep3 protein_coding protein_coding MGP_LPJ_T0041674.1 MGP_LPJ_G0022011.1 mouse_genomes_project 15 81980593 82010291 + Xpnpep3 protein_coding processed_transcript MGP_LPJ_T0006755.1 MGP_LPJ_G0005583.1 mouse_genomes_project 15 843508 864243 + Gm2093 lincRNA lincRNA MGP_LPJ_T0041541.1 MGP_LPJ_G0021975.1 mouse_genomes_project 15 79950643 79972197 - MGP_LPJ_P0041541 Kcnj4 protein_coding protein_coding MGP_LPJ_T0010103.1 MGP_LPJ_G0008221.1 mouse_genomes_project 15 91622115 91622168 + Mir7648 miRNA miRNA MGP_LPJ_T0040410.1 MGP_LPJ_G0021621.1 mouse_genomes_project 15 6592117 6776640 - MGP_LPJ_P0040410 protein_coding protein_coding MGP_LPJ_T0040411.1 MGP_LPJ_G0021621.1 mouse_genomes_project 15 6592186 6776571 - MGP_LPJ_P0040411 protein_coding unknown_likely_coding MGP_LPJ_T0040412.1 MGP_LPJ_G0021621.1 mouse_genomes_project 15 6612920 6776571 - MGP_LPJ_P0040412 protein_coding unknown_likely_coding MGP_LPJ_T0040413.1 MGP_LPJ_G0021621.1 mouse_genomes_project 15 6683521 6776670 - MGP_LPJ_P0040413 protein_coding protein_coding MGP_LPJ_T0040414.1 MGP_LPJ_G0021621.1 mouse_genomes_project 15 6711049 6776622 - MGP_LPJ_P0040414 protein_coding protein_coding MGP_LPJ_T0040415.1 MGP_LPJ_G0021621.1 mouse_genomes_project 15 6731195 6776622 - MGP_LPJ_P0040415 protein_coding protein_coding MGP_LPJ_T0040416.1 MGP_LPJ_G0021621.1 mouse_genomes_project 15 6731198 6776579 - MGP_LPJ_P0040416 protein_coding protein_coding MGP_LPJ_T0100375.1 MGP_LPJ_G0038638.1 mouse_genomes_project 15 28120574 28120752 - Gm26163 snoRNA snoRNA MGP_LPJ_T0042412.1 MGP_LPJ_G0022246.1 mouse_genomes_project 15 102088151 102280055 + MGP_LPJ_P0042412 Dip2b protein_coding protein_coding MGP_LPJ_T0042413.1 MGP_LPJ_G0022246.1 mouse_genomes_project 15 102210614 102276252 + MGP_LPJ_P0042413 Dip2b protein_coding protein_coding MGP_LPJ_T0042414.1 MGP_LPJ_G0022246.1 mouse_genomes_project 15 102210614 102280055 + MGP_LPJ_P0042414 Dip2b protein_coding protein_coding MGP_LPJ_T0042415.1 MGP_LPJ_G0022246.1 mouse_genomes_project 15 102263768 102266262 + Dip2b protein_coding processed_transcript MGP_LPJ_T0042662.1 MGP_LPJ_G0022328.1 mouse_genomes_project 15 105325146 105328428 + MGP_LPJ_P0042662 Hoxc11 protein_coding protein_coding MGP_LPJ_T0101900.1 MGP_LPJ_G0039937.1 mouse_genomes_project 15 75373928 75382299 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0041904.1 MGP_LPJ_G0022086.1 mouse_genomes_project 15 85999536 86004956 + MGP_LPJ_P0041904 Upk3a protein_coding protein_coding MGP_LPJ_T0042010.1 MGP_LPJ_G0022120.1 mouse_genomes_project 15 90475585 90482700 - MGP_LPJ_P0042010 Mapk11 protein_coding protein_coding MGP_LPJ_T0011411.1 MGP_LPJ_G0009529.1 mouse_genomes_project 15 93064596 93064882 - Gm25389 misc_RNA misc_RNA MGP_LPJ_T0011416.1 MGP_LPJ_G0009534.1 mouse_genomes_project 15 105316160 105316229 + Gm27337 misc_RNA misc_RNA MGP_LPJ_T0000967.1 MGP_LPJ_G0000895.1 mouse_genomes_project 15 18836842 18837261 + TEC TEC MGP_LPJ_T0041823.1 MGP_LPJ_G0022060.1 mouse_genomes_project 15 83994034 84014979 - MGP_LPJ_P0041823 Cyb5r3 protein_coding protein_coding MGP_LPJ_T0041824.1 MGP_LPJ_G0022060.1 mouse_genomes_project 15 83999918 84012893 - MGP_LPJ_P0041824 Cyb5r3 protein_coding protein_coding MGP_LPJ_T0041825.1 MGP_LPJ_G0022060.1 mouse_genomes_project 15 84003285 84012562 - MGP_LPJ_P0041825 Cyb5r3 protein_coding protein_coding MGP_LPJ_T0017393.1 MGP_LPJ_G0015209.1 mouse_genomes_project 15 55628904 55633421 + Has2os processed_transcript antisense MGP_LPJ_T0017394.1 MGP_LPJ_G0015209.1 mouse_genomes_project 15 55632512 55721757 + Has2os processed_transcript antisense MGP_LPJ_T0017395.1 MGP_LPJ_G0015209.1 mouse_genomes_project 15 55632914 55721473 + Has2os processed_transcript antisense MGP_LPJ_T0017396.1 MGP_LPJ_G0015209.1 mouse_genomes_project 15 55708002 55721436 + Has2os processed_transcript lincRNA MGP_LPJ_T0041617.1 MGP_LPJ_G0021999.1 mouse_genomes_project 15 80796678 80923673 + MGP_LPJ_P0041617 Cacna1i protein_coding protein_coding MGP_LPJ_T0041618.1 MGP_LPJ_G0021999.1 mouse_genomes_project 15 80798281 80921156 + MGP_LPJ_P0041618 Cacna1i protein_coding nonsense_mediated_decay MGP_LPJ_T0041619.1 MGP_LPJ_G0021999.1 mouse_genomes_project 15 80798367 80923683 + MGP_LPJ_P0041619 Cacna1i protein_coding unknown_likely_coding MGP_LPJ_T0041620.1 MGP_LPJ_G0021999.1 mouse_genomes_project 15 80914664 80919224 + MGP_LPJ_P0041620 Cacna1i protein_coding protein_coding MGP_LPJ_T0041621.1 MGP_LPJ_G0021999.1 mouse_genomes_project 15 80914664 80916254 + MGP_LPJ_P0041621 Cacna1i protein_coding nonsense_mediated_decay MGP_LPJ_T0041622.1 MGP_LPJ_G0021999.1 mouse_genomes_project 15 80914664 80916254 + MGP_LPJ_P0041622 Cacna1i protein_coding protein_coding MGP_LPJ_T0041623.1 MGP_LPJ_G0021999.1 mouse_genomes_project 15 80914664 80916254 + MGP_LPJ_P0041623 Cacna1i protein_coding protein_coding MGP_LPJ_T0041310.1 MGP_LPJ_G0021906.1 mouse_genomes_project 15 76842566 76851010 + MGP_LPJ_P0041310 Kifc2 protein_coding protein_coding MGP_LPJ_T0042637.1 MGP_LPJ_G0022322.1 mouse_genomes_project 15 104867058 104965649 - MGP_LPJ_P0042637 protein_coding nonsense_mediated_decay MGP_LPJ_T0040313.1 MGP_LPJ_G0021592.1 mouse_genomes_project 15 1724266 1791098 + MGP_LPJ_P0040313 Mroh2b protein_coding protein_coding MGP_LPJ_T0013053.1 MGP_LPJ_G0011144.1 mouse_genomes_project 15 11771782 11772111 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013063.1 MGP_LPJ_G0011154.1 mouse_genomes_project 15 36195023 36195428 + processed_pseudogene processed_pseudogene MGP_LPJ_T0040727.1 MGP_LPJ_G0021731.1 mouse_genomes_project 15 42239716 42243045 - MGP_LPJ_P0040727 Tmem74 protein_coding protein_coding MGP_LPJ_T0010105.1 MGP_LPJ_G0008223.1 mouse_genomes_project 15 100406481 100406598 - Mir1291 miRNA miRNA MGP_LPJ_T0040492.1 MGP_LPJ_G0021644.1 mouse_genomes_project 15 10011301 10127509 + MGP_LPJ_P0040492 Drosha protein_coding protein_coding MGP_LPJ_T0040493.1 MGP_LPJ_G0021644.1 mouse_genomes_project 15 10011349 10127462 + MGP_LPJ_P0040493 Drosha protein_coding protein_coding MGP_LPJ_T0040494.1 MGP_LPJ_G0021644.1 mouse_genomes_project 15 10011376 10020532 + Drosha protein_coding processed_transcript MGP_LPJ_T0040495.1 MGP_LPJ_G0021644.1 mouse_genomes_project 15 10011376 10020532 + Drosha protein_coding processed_transcript MGP_LPJ_T0040496.1 MGP_LPJ_G0021644.1 mouse_genomes_project 15 10012613 10020450 + Drosha protein_coding processed_transcript MGP_LPJ_T0040497.1 MGP_LPJ_G0021644.1 mouse_genomes_project 15 10019739 10127341 + MGP_LPJ_P0040497 Drosha protein_coding protein_coding MGP_LPJ_T0040498.1 MGP_LPJ_G0021644.1 mouse_genomes_project 15 10023269 10095625 + Drosha protein_coding retained_intron MGP_LPJ_T0040499.1 MGP_LPJ_G0021644.1 mouse_genomes_project 15 10068497 10075025 + Drosha protein_coding processed_transcript MGP_LPJ_T0017423.1 MGP_LPJ_G0015225.1 mouse_genomes_project 15 99991034 100038424 - Gm44579 processed_transcript processed_transcript MGP_LPJ_T0040681.1 MGP_LPJ_G0021709.1 mouse_genomes_project 15 36312415 36430442 - MGP_LPJ_P0040681 Ubr5 protein_coding protein_coding MGP_LPJ_T0040682.1 MGP_LPJ_G0021709.1 mouse_genomes_project 15 36313381 36430007 - MGP_LPJ_P0040682 Ubr5 protein_coding unknown_likely_coding MGP_LPJ_T0013076.1 MGP_LPJ_G0011167.1 mouse_genomes_project 15 61459560 61460672 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003613.1 MGP_LPJ_G0003278.1 mouse_genomes_project 15 56721494 56723584 - 9330154K18Rik antisense antisense MGP_LPJ_T0040934.1 MGP_LPJ_G0021807.1 mouse_genomes_project 15 65930699 65967246 - MGP_LPJ_P0040934 Tmem71 protein_coding protein_coding MGP_LPJ_T0040599.1 MGP_LPJ_G0021685.1 mouse_genomes_project 15 32690777 32703364 - MGP_LPJ_P0040599 Rida protein_coding protein_coding MGP_LPJ_T0040600.1 MGP_LPJ_G0021685.1 mouse_genomes_project 15 32690780 32697917 - Rida protein_coding retained_intron MGP_LPJ_T0040601.1 MGP_LPJ_G0021685.1 mouse_genomes_project 15 32691650 32703280 - Rida protein_coding retained_intron MGP_LPJ_T0040602.1 MGP_LPJ_G0021685.1 mouse_genomes_project 15 32692360 32697803 - Rida protein_coding processed_transcript MGP_LPJ_T0011409.1 MGP_LPJ_G0009527.1 mouse_genomes_project 15 78767237 78767347 + Gm26329 misc_RNA misc_RNA MGP_LPJ_T0040713.1 MGP_LPJ_G0021723.1 mouse_genomes_project 15 38415670 38422182 + MGP_LPJ_P0040713 9330182O14Rik protein_coding protein_coding MGP_LPJ_T0042550.1 MGP_LPJ_G0022301.1 mouse_genomes_project 15 104422034 104446001 - Spryd3 protein_coding retained_intron MGP_LPJ_T0042551.1 MGP_LPJ_G0022301.1 mouse_genomes_project 15 104422034 104446043 - MGP_LPJ_P0042551 Spryd3 protein_coding protein_coding MGP_LPJ_T0042552.1 MGP_LPJ_G0022301.1 mouse_genomes_project 15 104423675 104438754 - Spryd3 protein_coding processed_transcript MGP_LPJ_T0042553.1 MGP_LPJ_G0022301.1 mouse_genomes_project 15 104440081 104440772 - Spryd3 protein_coding retained_intron MGP_LPJ_T0042428.1 MGP_LPJ_G0022250.1 mouse_genomes_project 15 102380958 102398479 + MGP_LPJ_P0042428 protein_coding protein_coding MGP_LPJ_T0010041.1 MGP_LPJ_G0008159.1 mouse_genomes_project 15 9319539 9319622 + Mir1898 miRNA miRNA MGP_LPJ_T0040299.1 MGP_LPJ_G0021588.1 mouse_genomes_project 15 875122 1007980 + MGP_LPJ_P0040299 Oxct1 protein_coding protein_coding MGP_LPJ_T0040300.1 MGP_LPJ_G0021588.1 mouse_genomes_project 15 895269 940217 + Oxct1 protein_coding processed_transcript MGP_LPJ_T0040301.1 MGP_LPJ_G0021588.1 mouse_genomes_project 15 994885 1006613 + Oxct1 protein_coding processed_transcript MGP_LPJ_T0040302.1 MGP_LPJ_G0021588.1 mouse_genomes_project 15 995174 1006592 + Oxct1 protein_coding processed_transcript MGP_LPJ_T0041952.1 MGP_LPJ_G0022103.1 mouse_genomes_project 15 87322597 87627635 + MGP_LPJ_P0041952 Tbc1d22a protein_coding protein_coding MGP_LPJ_T0006770.1 MGP_LPJ_G0005594.1 mouse_genomes_project 15 36759960 36761280 + Gm26863 lincRNA lincRNA MGP_LPJ_T0041297.1 MGP_LPJ_G0021904.1 mouse_genomes_project 15 76800682 76804537 - MGP_LPJ_P0041297 Tonsl protein_coding protein_coding MGP_LPJ_T0041298.1 MGP_LPJ_G0021904.1 mouse_genomes_project 15 76804511 76809004 - MGP_LPJ_P0041298 Tonsl protein_coding protein_coding MGP_LPJ_T0041299.1 MGP_LPJ_G0021904.1 mouse_genomes_project 15 76804746 76821171 - MGP_LPJ_P0041299 Tonsl protein_coding protein_coding MGP_LPJ_T0041300.1 MGP_LPJ_G0021904.1 mouse_genomes_project 15 76804747 76809085 - Tonsl protein_coding retained_intron MGP_LPJ_T0041301.1 MGP_LPJ_G0021904.1 mouse_genomes_project 15 76812472 76813376 - MGP_LPJ_P0041301 Tonsl protein_coding nonsense_mediated_decay MGP_LPJ_T0041302.1 MGP_LPJ_G0021904.1 mouse_genomes_project 15 76812505 76821142 - MGP_LPJ_P0041302 Tonsl protein_coding nonsense_mediated_decay MGP_LPJ_T0041303.1 MGP_LPJ_G0021904.1 mouse_genomes_project 15 76818399 76819492 - Tonsl protein_coding retained_intron MGP_LPJ_T0041304.1 MGP_LPJ_G0021904.1 mouse_genomes_project 15 76819769 76820851 - Tonsl protein_coding retained_intron MGP_LPJ_T0041305.1 MGP_LPJ_G0021904.1 mouse_genomes_project 15 76820071 76821053 - MGP_LPJ_P0041305 Tonsl protein_coding protein_coding MGP_LPJ_T0000966.1 MGP_LPJ_G0000894.1 mouse_genomes_project 15 17857660 17859169 - TEC TEC MGP_LPJ_T0010106.1 MGP_LPJ_G0008224.1 mouse_genomes_project 15 101019499 101019560 + Mir6960 miRNA miRNA MGP_LPJ_T0041763.1 MGP_LPJ_G0022036.1 mouse_genomes_project 15 82865014 82869817 - MGP_LPJ_P0041763 protein_coding protein_coding MGP_LPJ_T0013075.1 MGP_LPJ_G0011166.1 mouse_genomes_project 15 59124410 59125417 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099115.1 MGP_LPJ_G0037378.1 mouse_genomes_project 15 48106088 48106194 + Gm23848 snRNA snRNA MGP_LPJ_T0040836.1 MGP_LPJ_G0021771.1 mouse_genomes_project 15 57051245 57082637 - MGP_LPJ_P0040836 Zhx1 protein_coding protein_coding MGP_LPJ_T0040837.1 MGP_LPJ_G0021771.1 mouse_genomes_project 15 57051245 57082881 - MGP_LPJ_P0040837 Zhx1 protein_coding protein_coding MGP_LPJ_T0040838.1 MGP_LPJ_G0021771.1 mouse_genomes_project 15 57051547 57082861 - MGP_LPJ_P0040838 Zhx1 protein_coding protein_coding MGP_LPJ_T0040841.1 MGP_LPJ_G0021771.1 mouse_genomes_project 15 57057204 57082606 - MGP_LPJ_P0040841 Zhx1 protein_coding protein_coding MGP_LPJ_T0040842.1 MGP_LPJ_G0021771.1 mouse_genomes_project 15 57059138 57082755 - Zhx1 protein_coding retained_intron MGP_LPJ_T0040843.1 MGP_LPJ_G0021771.1 mouse_genomes_project 15 57075051 57082933 - Zhx1 protein_coding retained_intron MGP_LPJ_T0041949.1 MGP_LPJ_G0022102.1 mouse_genomes_project 15 87237712 87261466 - Cerk protein_coding retained_intron MGP_LPJ_T0041950.1 MGP_LPJ_G0022102.1 mouse_genomes_project 15 87237713 87292670 - MGP_LPJ_P0041950 Cerk protein_coding protein_coding MGP_LPJ_T0041951.1 MGP_LPJ_G0022102.1 mouse_genomes_project 15 87238905 87251063 - MGP_LPJ_P0041951 Cerk protein_coding protein_coding MGP_LPJ_T0100384.1 MGP_LPJ_G0038647.1 mouse_genomes_project 15 40297973 40298075 + Gm24751 snoRNA snoRNA MGP_LPJ_T0099119.1 MGP_LPJ_G0037382.1 mouse_genomes_project 15 57153369 57153431 - Gm23475 snRNA snRNA MGP_LPJ_T0040935.1 MGP_LPJ_G0021808.1 mouse_genomes_project 15 65983776 66053930 + MGP_LPJ_P0040935 Phf20l1 protein_coding protein_coding MGP_LPJ_T0040461.1 MGP_LPJ_G0021636.1 mouse_genomes_project 15 8980723 9052732 - MGP_LPJ_P0040461 Npr3 protein_coding protein_coding MGP_LPJ_T0003647.1 MGP_LPJ_G0003305.1 mouse_genomes_project 15 101966205 101968192 + Gm21917 antisense antisense MGP_LPJ_T0003648.1 MGP_LPJ_G0003305.1 mouse_genomes_project 15 101966205 101989097 + Gm21917 antisense antisense MGP_LPJ_T0013079.1 MGP_LPJ_G0011170.1 mouse_genomes_project 15 68392490 68392763 + processed_pseudogene processed_pseudogene MGP_LPJ_T0042497.1 MGP_LPJ_G0022266.1 mouse_genomes_project 15 103215730 103219938 - MGP_LPJ_P0042497 Fignl2 protein_coding protein_coding MGP_LPJ_T0041281.1 MGP_LPJ_G0021900.1 mouse_genomes_project 15 76717715 76720903 + MGP_LPJ_P0041281 Slc52a2 protein_coding protein_coding MGP_LPJ_T0013058.1 MGP_LPJ_G0011149.1 mouse_genomes_project 15 35093436 35113107 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100369.1 MGP_LPJ_G0038632.1 mouse_genomes_project 15 18552851 18552979 + Gm25711 snoRNA snoRNA MGP_LPJ_T0099149.1 MGP_LPJ_G0037412.1 mouse_genomes_project 15 104702728 104702832 + Gm23590 snRNA snRNA MGP_LPJ_T0040698.1 MGP_LPJ_G0021717.1 mouse_genomes_project 15 37382592 37402371 - MGP_LPJ_P0040698 Slc25a32 protein_coding protein_coding MGP_LPJ_T0040722.1 MGP_LPJ_G0021727.1 mouse_genomes_project 15 40793431 41051609 - MGP_LPJ_P0040722 Angpt1 protein_coding protein_coding MGP_LPJ_T0040723.1 MGP_LPJ_G0021727.1 mouse_genomes_project 15 40795688 41051093 - MGP_LPJ_P0040723 Angpt1 protein_coding unknown_likely_coding MGP_LPJ_T0041428.1 MGP_LPJ_G0021945.1 mouse_genomes_project 15 78881946 78898215 - MGP_LPJ_P0041428 Il2rb protein_coding protein_coding MGP_LPJ_T0041429.1 MGP_LPJ_G0021945.1 mouse_genomes_project 15 78882718 78896907 - MGP_LPJ_P0041429 Il2rb protein_coding protein_coding MGP_LPJ_T0040603.1 MGP_LPJ_G0021686.1 mouse_genomes_project 15 32703412 32738138 + MGP_LPJ_P0040603 Pop1 protein_coding protein_coding MGP_LPJ_T0040604.1 MGP_LPJ_G0021686.1 mouse_genomes_project 15 32703431 32738127 + MGP_LPJ_P0040604 Pop1 protein_coding protein_coding MGP_LPJ_T0040605.1 MGP_LPJ_G0021686.1 mouse_genomes_project 15 32717008 32719291 + Pop1 protein_coding retained_intron MGP_LPJ_T0040606.1 MGP_LPJ_G0021686.1 mouse_genomes_project 15 32721260 32727017 + Pop1 protein_coding processed_transcript MGP_LPJ_T0040607.1 MGP_LPJ_G0021686.1 mouse_genomes_project 15 32724788 32736651 + Pop1 protein_coding retained_intron MGP_LPJ_T0040608.1 MGP_LPJ_G0021686.1 mouse_genomes_project 15 32733669 32736721 + Pop1 protein_coding retained_intron MGP_LPJ_T0041839.1 MGP_LPJ_G0022068.1 mouse_genomes_project 15 84459393 84480456 - MGP_LPJ_P0041839 Ttll12 protein_coding nonsense_mediated_decay MGP_LPJ_T0041840.1 MGP_LPJ_G0022068.1 mouse_genomes_project 15 84459918 84480456 - MGP_LPJ_P0041840 Ttll12 protein_coding protein_coding MGP_LPJ_T0041841.1 MGP_LPJ_G0022068.1 mouse_genomes_project 15 84461162 84480409 - MGP_LPJ_P0041841 Ttll12 protein_coding unknown_likely_coding MGP_LPJ_T0041842.1 MGP_LPJ_G0022068.1 mouse_genomes_project 15 84466249 84471376 - Ttll12 protein_coding retained_intron MGP_LPJ_T0041039.1 MGP_LPJ_G0021836.1 mouse_genomes_project 15 74574019 74576102 - MGP_LPJ_P0041039 Lypd2 protein_coding protein_coding MGP_LPJ_T0041040.1 MGP_LPJ_G0021836.1 mouse_genomes_project 15 74574573 74576090 - Lypd2 protein_coding retained_intron MGP_LPJ_T0040845.1 MGP_LPJ_G0021773.1 mouse_genomes_project 15 57151597 57170027 + MGP_LPJ_P0040845 Wdyhv1 protein_coding protein_coding MGP_LPJ_T0013061.1 MGP_LPJ_G0011152.1 mouse_genomes_project 15 35749908 35751356 + processed_pseudogene processed_pseudogene MGP_LPJ_T0041929.1 MGP_LPJ_G0022097.1 mouse_genomes_project 15 86909740 86938073 + MGP_LPJ_P0041929 Ttc38 protein_coding protein_coding MGP_LPJ_T0041930.1 MGP_LPJ_G0022097.1 mouse_genomes_project 15 86909778 86936980 + Ttc38 protein_coding processed_transcript MGP_LPJ_T0041931.1 MGP_LPJ_G0022097.1 mouse_genomes_project 15 86909778 86921935 + MGP_LPJ_P0041931 Ttc38 protein_coding nonsense_mediated_decay MGP_LPJ_T0013050.1 MGP_LPJ_G0011141.1 mouse_genomes_project 15 7564585 7565844 - processed_pseudogene processed_pseudogene MGP_LPJ_T0042399.1 MGP_LPJ_G0022242.1 mouse_genomes_project 15 101760506 101800731 - MGP_LPJ_P0042399 Cers5 protein_coding protein_coding MGP_LPJ_T0042400.1 MGP_LPJ_G0022242.1 mouse_genomes_project 15 101760936 101800734 - MGP_LPJ_P0042400 Cers5 protein_coding nonsense_mediated_decay MGP_LPJ_T0042401.1 MGP_LPJ_G0022242.1 mouse_genomes_project 15 101761244 101800870 - MGP_LPJ_P0042401 Cers5 protein_coding protein_coding MGP_LPJ_T0042402.1 MGP_LPJ_G0022242.1 mouse_genomes_project 15 101762990 101773799 - MGP_LPJ_P0042402 Cers5 protein_coding protein_coding MGP_LPJ_T0042403.1 MGP_LPJ_G0022242.1 mouse_genomes_project 15 101765058 101801143 - MGP_LPJ_P0042403 Cers5 protein_coding protein_coding MGP_LPJ_T0042404.1 MGP_LPJ_G0022242.1 mouse_genomes_project 15 101771614 101800361 - MGP_LPJ_P0042404 Cers5 protein_coding protein_coding MGP_LPJ_T0040700.1 MGP_LPJ_G0021719.1 mouse_genomes_project 15 37484457 37959569 + MGP_LPJ_P0040700 Rims2 protein_coding protein_coding MGP_LPJ_T0040701.1 MGP_LPJ_G0021719.1 mouse_genomes_project 15 37484488 37959393 + MGP_LPJ_P0040701 Rims2 protein_coding protein_coding MGP_LPJ_T0040702.1 MGP_LPJ_G0021719.1 mouse_genomes_project 15 37556108 37619557 + MGP_LPJ_P0040702 Rims2 protein_coding unknown_likely_coding MGP_LPJ_T0040703.1 MGP_LPJ_G0021719.1 mouse_genomes_project 15 37657428 37894202 + MGP_LPJ_P0040703 Rims2 protein_coding unknown_likely_coding MGP_LPJ_T0040704.1 MGP_LPJ_G0021719.1 mouse_genomes_project 15 37937604 37961996 + MGP_LPJ_P0040704 Rims2 protein_coding unknown_likely_coding MGP_LPJ_T0040369.1 MGP_LPJ_G0021609.1 mouse_genomes_project 15 5077998 5128532 + MGP_LPJ_P0040369 Nup155 protein_coding protein_coding MGP_LPJ_T0013098.1 MGP_LPJ_G0011189.1 mouse_genomes_project 15 92996877 92998033 - processed_pseudogene processed_pseudogene MGP_LPJ_T0042541.1 MGP_LPJ_G0022293.1 mouse_genomes_project 15 104170331 104178878 - MGP_LPJ_P0042541 Krt76 protein_coding protein_coding MGP_LPJ_T0099144.1 MGP_LPJ_G0037407.1 mouse_genomes_project 15 97260005 97260109 - Gm24668 snRNA snRNA MGP_LPJ_T0041082.1 MGP_LPJ_G0021852.1 mouse_genomes_project 15 75196815 75202366 + MGP_LPJ_P0041082 BC025446 protein_coding protein_coding MGP_LPJ_T0041083.1 MGP_LPJ_G0021852.1 mouse_genomes_project 15 75197035 75203077 + MGP_LPJ_P0041083 BC025446 protein_coding protein_coding MGP_LPJ_T0042215.1 MGP_LPJ_G0022180.1 mouse_genomes_project 15 99573571 99617478 - MGP_LPJ_P0042215 Hdac7 protein_coding protein_coding MGP_LPJ_T0042216.1 MGP_LPJ_G0022180.1 mouse_genomes_project 15 99573588 99617751 - MGP_LPJ_P0042216 Hdac7 protein_coding protein_coding MGP_LPJ_T0042217.1 MGP_LPJ_G0022180.1 mouse_genomes_project 15 99573594 99575356 - Hdac7 protein_coding retained_intron MGP_LPJ_T0042218.1 MGP_LPJ_G0022180.1 mouse_genomes_project 15 99573619 99617478 - MGP_LPJ_P0042218 Hdac7 protein_coding protein_coding MGP_LPJ_T0042219.1 MGP_LPJ_G0022180.1 mouse_genomes_project 15 99574607 99617361 - MGP_LPJ_P0042219 Hdac7 protein_coding protein_coding MGP_LPJ_T0042220.1 MGP_LPJ_G0022180.1 mouse_genomes_project 15 99578709 99617453 - MGP_LPJ_P0042220 Hdac7 protein_coding nonsense_mediated_decay MGP_LPJ_T0042221.1 MGP_LPJ_G0022180.1 mouse_genomes_project 15 99580509 99590934 - MGP_LPJ_P0042221 Hdac7 protein_coding protein_coding MGP_LPJ_T0042222.1 MGP_LPJ_G0022180.1 mouse_genomes_project 15 99582170 99591285 - MGP_LPJ_P0042222 Hdac7 protein_coding protein_coding MGP_LPJ_T0013101.1 MGP_LPJ_G0011192.1 mouse_genomes_project 15 101558149 101558506 - processed_pseudogene processed_pseudogene MGP_LPJ_T0042576.1 MGP_LPJ_G0022309.1 mouse_genomes_project 15 104619949 104652328 + MGP_LPJ_P0042576 Espl1 protein_coding protein_coding MGP_LPJ_T0041716.1 MGP_LPJ_G0022021.1 mouse_genomes_project 15 82460353 82460710 - MGP_LPJ_P0041716 Gm8444 protein_coding protein_coding MGP_LPJ_T0100372.1 MGP_LPJ_G0038635.1 mouse_genomes_project 15 27955330 27955464 - Gm23033 snoRNA snoRNA MGP_LPJ_T0101496.1 MGP_LPJ_G0039635.1 mouse_genomes_project 15 100044061 100045120 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0101497.1 MGP_LPJ_G0039635.1 mouse_genomes_project 15 100044605 100054061 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0042263.1 MGP_LPJ_G0022193.1 mouse_genomes_project 15 100201964 100202882 - MGP_LPJ_P0042263 Olfr284 protein_coding protein_coding MGP_LPJ_T0042264.1 MGP_LPJ_G0022193.1 mouse_genomes_project 15 100201964 100202930 - MGP_LPJ_P0042264 Olfr284 protein_coding protein_coding MGP_LPJ_T0040930.1 MGP_LPJ_G0021805.1 mouse_genomes_project 15 65365448 65674809 - MGP_LPJ_P0040930 Kcnq3 protein_coding protein_coding MGP_LPJ_T0040931.1 MGP_LPJ_G0021805.1 mouse_genomes_project 15 65404595 65483583 - Kcnq3 protein_coding processed_transcript MGP_LPJ_T0040932.1 MGP_LPJ_G0021805.1 mouse_genomes_project 15 65671657 65674636 - Kcnq3 protein_coding retained_intron MGP_LPJ_T0040481.1 MGP_LPJ_G0021642.1 mouse_genomes_project 15 9518599 9756944 - MGP_LPJ_P0040481 Pdzd2 protein_coding protein_coding MGP_LPJ_T0040482.1 MGP_LPJ_G0021642.1 mouse_genomes_project 15 9560329 9563088 - Pdzd2 protein_coding retained_intron MGP_LPJ_T0040483.1 MGP_LPJ_G0021642.1 mouse_genomes_project 15 9566741 9574913 - Pdzd2 protein_coding retained_intron MGP_LPJ_T0040484.1 MGP_LPJ_G0021642.1 mouse_genomes_project 15 9569092 9712265 - MGP_LPJ_P0040484 Pdzd2 protein_coding protein_coding MGP_LPJ_T0040485.1 MGP_LPJ_G0021642.1 mouse_genomes_project 15 9621989 9658925 - MGP_LPJ_P0040485 Pdzd2 protein_coding protein_coding MGP_LPJ_T0040486.1 MGP_LPJ_G0021642.1 mouse_genomes_project 15 9622029 9712862 - MGP_LPJ_P0040486 Pdzd2 protein_coding protein_coding MGP_LPJ_T0040487.1 MGP_LPJ_G0021642.1 mouse_genomes_project 15 9689377 9712770 - Pdzd2 protein_coding processed_transcript MGP_LPJ_T0040488.1 MGP_LPJ_G0021642.1 mouse_genomes_project 15 9707905 9712268 - Pdzd2 protein_coding retained_intron MGP_LPJ_T0040489.1 MGP_LPJ_G0021642.1 mouse_genomes_project 15 9712049 9713217 - Pdzd2 protein_coding retained_intron MGP_LPJ_T0040490.1 MGP_LPJ_G0021642.1 mouse_genomes_project 15 9752902 9768647 - Pdzd2 protein_coding processed_transcript MGP_LPJ_T0042663.1 MGP_LPJ_G0022329.1 mouse_genomes_project 15 105337489 105342575 + MGP_LPJ_P0042663 Hoxc10 protein_coding protein_coding MGP_LPJ_T0042372.1 MGP_LPJ_G0022231.1 mouse_genomes_project 15 101460290 101464870 - MGP_LPJ_P0042372 Bcdin3d protein_coding protein_coding MGP_LPJ_T0040546.1 MGP_LPJ_G0021663.1 mouse_genomes_project 15 26021428 26021799 - MGP_LPJ_P0040546 Gm10076 protein_coding protein_coding MGP_LPJ_T0041136.1 MGP_LPJ_G0021869.1 mouse_genomes_project 15 76070650 76079076 + MGP_LPJ_P0041136 Zfp623 protein_coding protein_coding MGP_LPJ_T0100377.1 MGP_LPJ_G0038640.1 mouse_genomes_project 15 30430230 30430301 - Snord123 snoRNA snoRNA MGP_LPJ_T0042554.1 MGP_LPJ_G0022302.1 mouse_genomes_project 15 104454767 104463377 + MGP_LPJ_P0042554 Igfbp6 protein_coding protein_coding MGP_LPJ_T0040983.1 MGP_LPJ_G0021820.1 mouse_genomes_project 15 72825532 72830078 + MGP_LPJ_P0040983 Chrac1 protein_coding protein_coding MGP_LPJ_T0040984.1 MGP_LPJ_G0021820.1 mouse_genomes_project 15 72825532 72833603 + MGP_LPJ_P0040984 Chrac1 protein_coding protein_coding MGP_LPJ_T0040985.1 MGP_LPJ_G0021820.1 mouse_genomes_project 15 72825552 72830777 + Chrac1 protein_coding retained_intron MGP_LPJ_T0006802.1 MGP_LPJ_G0005614.1 mouse_genomes_project 15 83793990 83801713 - Gm29019 lincRNA lincRNA MGP_LPJ_T0006803.1 MGP_LPJ_G0005614.1 mouse_genomes_project 15 83794048 83801594 - Gm29019 lincRNA lincRNA MGP_LPJ_T0041246.1 MGP_LPJ_G0021890.1 mouse_genomes_project 15 76518141 76526587 + MGP_LPJ_P0041246 unknown_likely_coding unknown_likely_coding MGP_LPJ_T0017421.1 MGP_LPJ_G0015224.1 mouse_genomes_project 15 93361393 93388500 + processed_transcript processed_transcript MGP_LPJ_T0017422.1 MGP_LPJ_G0015224.1 mouse_genomes_project 15 93369317 93401230 + processed_transcript processed_transcript MGP_LPJ_T0099106.1 MGP_LPJ_G0037369.1 mouse_genomes_project 15 32741582 32741692 + Gm22208 snRNA snRNA MGP_LPJ_T0010108.1 MGP_LPJ_G0008226.1 mouse_genomes_project 15 103379180 103379243 + Mir6962 miRNA miRNA MGP_LPJ_T0010084.1 MGP_LPJ_G0008202.1 mouse_genomes_project 15 83086319 83086405 + Gm25990 miRNA miRNA MGP_LPJ_T0041646.1 MGP_LPJ_G0022006.1 mouse_genomes_project 15 81561501 81571153 + MGP_LPJ_P0041646 Sgsm3 protein_coding protein_coding MGP_LPJ_T0041014.1 MGP_LPJ_G0021828.1 mouse_genomes_project 15 73626925 73632273 + MGP_LPJ_P0041014 Gm6569 protein_coding protein_coding MGP_LPJ_T0097994.1 MGP_LPJ_G0036275.1 mouse_genomes_project 15 76039062 76041451 + pseudogene pseudogene MGP_LPJ_T0010089.1 MGP_LPJ_G0008207.1 mouse_genomes_project 15 83378601 83378661 - Gm27742 miRNA miRNA MGP_LPJ_T0040725.1 MGP_LPJ_G0021729.1 mouse_genomes_project 15 41622245 41654876 - MGP_LPJ_P0040725 Eif3e protein_coding protein_coding MGP_LPJ_T0041545.1 MGP_LPJ_G0021979.1 mouse_genomes_project 15 80083955 80143800 - MGP_LPJ_P0041545 Fam227a protein_coding protein_coding MGP_LPJ_T0041546.1 MGP_LPJ_G0021979.1 mouse_genomes_project 15 80086838 80143637 - MGP_LPJ_P0041546 Fam227a protein_coding protein_coding MGP_LPJ_T0041547.1 MGP_LPJ_G0021979.1 mouse_genomes_project 15 80086892 80143637 - MGP_LPJ_P0041547 Fam227a protein_coding nonsense_mediated_decay MGP_LPJ_T0041548.1 MGP_LPJ_G0021979.1 mouse_genomes_project 15 80103334 80132666 - MGP_LPJ_P0041548 Fam227a protein_coding protein_coding MGP_LPJ_T0041549.1 MGP_LPJ_G0021979.1 mouse_genomes_project 15 80116596 80143800 - Fam227a protein_coding retained_intron MGP_LPJ_T0041953.1 MGP_LPJ_G0022104.1 mouse_genomes_project 15 88834682 88971531 + MGP_LPJ_P0041953 Fam19a5 protein_coding protein_coding MGP_LPJ_T0041247.1 MGP_LPJ_G0021891.1 mouse_genomes_project 15 76534969 76537475 + MGP_LPJ_P0041247 Hgh1 protein_coding protein_coding MGP_LPJ_T0010071.1 MGP_LPJ_G0008189.1 mouse_genomes_project 15 79322125 79322199 + Mir6955 miRNA miRNA MGP_LPJ_T0042456.1 MGP_LPJ_G0022259.1 mouse_genomes_project 15 102751108 102759821 + MGP_LPJ_P0042456 Dazap2 protein_coding protein_coding MGP_LPJ_T0041766.1 MGP_LPJ_G0022038.1 mouse_genomes_project 15 82908231 82916609 + MGP_LPJ_P0041766 1500009C09Rik protein_coding protein_coding MGP_LPJ_T0041767.1 MGP_LPJ_G0022038.1 mouse_genomes_project 15 82911859 82916624 + MGP_LPJ_P0041767 1500009C09Rik protein_coding protein_coding MGP_LPJ_T0041378.1 MGP_LPJ_G0021930.1 mouse_genomes_project 15 77908318 77912349 - MGP_LPJ_P0041378 protein_coding protein_coding MGP_LPJ_T0040491.1 MGP_LPJ_G0021643.1 mouse_genomes_project 15 9994689 10011144 - MGP_LPJ_P0040491 6030458C11Rik protein_coding protein_coding MGP_LPJ_T0040705.1 MGP_LPJ_G0021720.1 mouse_genomes_project 15 38008006 38026451 + MGP_LPJ_P0040705 Dcstamp protein_coding protein_coding MGP_LPJ_T0010085.1 MGP_LPJ_G0008203.1 mouse_genomes_project 15 83135719 83135779 + Gm27622 miRNA miRNA MGP_LPJ_T0041113.1 MGP_LPJ_G0021863.1 mouse_genomes_project 15 76013429 76018062 - MGP_LPJ_P0041113 Mroh6 protein_coding protein_coding MGP_LPJ_T0041885.1 MGP_LPJ_G0022079.1 mouse_genomes_project 15 85510511 85514933 - MGP_LPJ_P0041885 Ldoc1l protein_coding protein_coding MGP_LPJ_T0042425.1 MGP_LPJ_G0022248.1 mouse_genomes_project 15 102355677 102368375 + MGP_LPJ_P0042425 Tmprss12 protein_coding protein_coding MGP_LPJ_T0040693.1 MGP_LPJ_G0021715.1 mouse_genomes_project 15 37291296 37322494 + MGP_LPJ_P0040693 Fzd6 protein_coding protein_coding MGP_LPJ_T0040694.1 MGP_LPJ_G0021715.1 mouse_genomes_project 15 37291349 37322494 + MGP_LPJ_P0040694 Fzd6 protein_coding protein_coding MGP_LPJ_T0041761.1 MGP_LPJ_G0022034.1 mouse_genomes_project 15 82785124 82844416 + MGP_LPJ_P0041761 Srebf2 protein_coding protein_coding MGP_LPJ_T0040315.1 MGP_LPJ_G0021594.1 mouse_genomes_project 15 1940405 1943764 - MGP_LPJ_P0040315 protein_coding protein_coding MGP_LPJ_T0003623.1 MGP_LPJ_G0003287.1 mouse_genomes_project 15 79343621 79345316 - 1700027A07Rik antisense antisense MGP_LPJ_T0011407.1 MGP_LPJ_G0009525.1 mouse_genomes_project 15 61416708 61416835 + Gm27957 misc_RNA misc_RNA MGP_LPJ_T0017387.1 MGP_LPJ_G0015208.1 mouse_genomes_project 15 35749794 35761223 - Gm15941 processed_transcript processed_transcript MGP_LPJ_T0017388.1 MGP_LPJ_G0015208.1 mouse_genomes_project 15 35750773 35757428 - Gm15941 processed_transcript processed_transcript MGP_LPJ_T0017389.1 MGP_LPJ_G0015208.1 mouse_genomes_project 15 35750964 35760707 - Gm15941 processed_transcript processed_transcript MGP_LPJ_T0017390.1 MGP_LPJ_G0015208.1 mouse_genomes_project 15 35751080 35761221 - Gm15941 processed_transcript processed_transcript MGP_LPJ_T0017391.1 MGP_LPJ_G0015208.1 mouse_genomes_project 15 35751233 35761212 - Gm15941 processed_transcript processed_transcript MGP_LPJ_T0017392.1 MGP_LPJ_G0015208.1 mouse_genomes_project 15 35755955 35761973 - Gm15941 processed_transcript processed_transcript MGP_LPJ_T0041052.1 MGP_LPJ_G0021843.1 mouse_genomes_project 15 74673368 74695335 + MGP_LPJ_P0041052 protein_coding protein_coding MGP_LPJ_T0041053.1 MGP_LPJ_G0021843.1 mouse_genomes_project 15 74673385 74700565 + MGP_LPJ_P0041053 protein_coding protein_coding MGP_LPJ_T0041055.1 MGP_LPJ_G0021843.1 mouse_genomes_project 15 74691943 74695335 + protein_coding processed_transcript MGP_LPJ_T0041056.1 MGP_LPJ_G0021843.1 mouse_genomes_project 15 74691943 74695335 + protein_coding processed_transcript MGP_LPJ_T0010088.1 MGP_LPJ_G0008206.1 mouse_genomes_project 15 83308916 83308976 + Gm27924 miRNA miRNA MGP_LPJ_T0041249.1 MGP_LPJ_G0021893.1 mouse_genomes_project 15 76546529 76609312 + Mroh1 protein_coding processed_transcript MGP_LPJ_T0041250.1 MGP_LPJ_G0021893.1 mouse_genomes_project 15 76546781 76577302 + Mroh1 protein_coding processed_transcript MGP_LPJ_T0041251.1 MGP_LPJ_G0021893.1 mouse_genomes_project 15 76546781 76626135 + MGP_LPJ_P0041251 Mroh1 protein_coding protein_coding MGP_LPJ_T0041252.1 MGP_LPJ_G0021893.1 mouse_genomes_project 15 76546791 76626132 + Mroh1 protein_coding retained_intron MGP_LPJ_T0041253.1 MGP_LPJ_G0021893.1 mouse_genomes_project 15 76546800 76569886 + MGP_LPJ_P0041253 Mroh1 protein_coding protein_coding MGP_LPJ_T0041254.1 MGP_LPJ_G0021893.1 mouse_genomes_project 15 76546821 76577301 + MGP_LPJ_P0041254 Mroh1 protein_coding protein_coding MGP_LPJ_T0041255.1 MGP_LPJ_G0021893.1 mouse_genomes_project 15 76557740 76609312 + MGP_LPJ_P0041255 Mroh1 protein_coding protein_coding MGP_LPJ_T0041256.1 MGP_LPJ_G0021893.1 mouse_genomes_project 15 76560016 76626075 + MGP_LPJ_P0041256 Mroh1 protein_coding protein_coding MGP_LPJ_T0041257.1 MGP_LPJ_G0021893.1 mouse_genomes_project 15 76597467 76626135 + Mroh1 protein_coding retained_intron MGP_LPJ_T0041258.1 MGP_LPJ_G0021893.1 mouse_genomes_project 15 76598224 76603477 + MGP_LPJ_P0041258 Mroh1 protein_coding protein_coding MGP_LPJ_T0041259.1 MGP_LPJ_G0021893.1 mouse_genomes_project 15 76614211 76619987 + Mroh1 protein_coding retained_intron MGP_LPJ_T0041260.1 MGP_LPJ_G0021893.1 mouse_genomes_project 15 76622760 76624317 + Mroh1 protein_coding retained_intron MGP_LPJ_T0041261.1 MGP_LPJ_G0021893.1 mouse_genomes_project 15 76623724 76624482 + Mroh1 protein_coding retained_intron MGP_LPJ_T0041262.1 MGP_LPJ_G0021893.1 mouse_genomes_project 15 76624910 76625481 + Mroh1 protein_coding retained_intron MGP_LPJ_T0041263.1 MGP_LPJ_G0021893.1 mouse_genomes_project 15 76624958 76626135 + MGP_LPJ_P0041263 Mroh1 protein_coding nonsense_mediated_decay MGP_LPJ_T0041264.1 MGP_LPJ_G0021893.1 mouse_genomes_project 15 76625235 76626135 + MGP_LPJ_P0041264 Mroh1 protein_coding nonsense_mediated_decay MGP_LPJ_T0041265.1 MGP_LPJ_G0021893.1 mouse_genomes_project 15 76625250 76626134 + Mroh1 protein_coding retained_intron MGP_LPJ_T0040699.1 MGP_LPJ_G0021718.1 mouse_genomes_project 15 37402519 37440358 + MGP_LPJ_P0040699 Dcaf13 protein_coding protein_coding MGP_LPJ_T0040561.1 MGP_LPJ_G0021671.1 mouse_genomes_project 15 29691087 29716297 + MGP_LPJ_P0040561 Cmbl protein_coding protein_coding MGP_LPJ_T0040562.1 MGP_LPJ_G0021671.1 mouse_genomes_project 15 29691201 29717926 + MGP_LPJ_P0040562 Cmbl protein_coding protein_coding MGP_LPJ_T0040563.1 MGP_LPJ_G0021671.1 mouse_genomes_project 15 29694545 29713316 + MGP_LPJ_P0040563 Cmbl protein_coding protein_coding MGP_LPJ_T0101890.1 MGP_LPJ_G0039927.1 mouse_genomes_project 15 74854917 74855068 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0040874.1 MGP_LPJ_G0021791.1 mouse_genomes_project 15 59146738 59148491 - MGP_LPJ_P0040874 4933412E24Rik protein_coding protein_coding MGP_LPJ_T0041366.1 MGP_LPJ_G0021923.1 mouse_genomes_project 15 77286875 77527602 - MGP_LPJ_P0041366 Rbfox2 protein_coding protein_coding MGP_LPJ_T0041367.1 MGP_LPJ_G0021923.1 mouse_genomes_project 15 77286876 77363193 - MGP_LPJ_P0041367 Rbfox2 protein_coding protein_coding MGP_LPJ_T0041368.1 MGP_LPJ_G0021923.1 mouse_genomes_project 15 77286876 77527602 - MGP_LPJ_P0041368 Rbfox2 protein_coding protein_coding MGP_LPJ_T0041369.1 MGP_LPJ_G0021923.1 mouse_genomes_project 15 77286876 77363193 - MGP_LPJ_P0041369 Rbfox2 protein_coding protein_coding MGP_LPJ_T0040867.1 MGP_LPJ_G0021787.1 mouse_genomes_project 15 58419306 58462855 - MGP_LPJ_P0040867 E430025E21Rik protein_coding protein_coding MGP_LPJ_T0100399.1 MGP_LPJ_G0038662.1 mouse_genomes_project 15 73103860 73103983 + Gm24787 snoRNA snoRNA MGP_LPJ_T0040732.1 MGP_LPJ_G0021734.1 mouse_genomes_project 15 42811573 42821158 + MGP_LPJ_P0040732 Eny2 protein_coding protein_coding MGP_LPJ_T0010104.1 MGP_LPJ_G0008222.1 mouse_genomes_project 15 98109192 98109284 + Gm25397 miRNA miRNA MGP_LPJ_T0010079.1 MGP_LPJ_G0008197.1 mouse_genomes_project 15 81494474 81494556 + Mir5113 miRNA miRNA MGP_LPJ_T0040684.1 MGP_LPJ_G0021711.1 mouse_genomes_project 15 36661004 36667288 - MGP_LPJ_P0040684 Klf10 protein_coding protein_coding MGP_LPJ_T0006777.1 MGP_LPJ_G0005601.1 mouse_genomes_project 15 43174229 43190336 + 2310069G16Rik lincRNA lincRNA MGP_LPJ_T0041148.1 MGP_LPJ_G0021873.1 mouse_genomes_project 15 76133397 76147952 - MGP_LPJ_P0041148 Fam83h protein_coding protein_coding MGP_LPJ_T0041149.1 MGP_LPJ_G0021873.1 mouse_genomes_project 15 76133397 76141802 - MGP_LPJ_P0041149 Fam83h protein_coding protein_coding MGP_LPJ_T0006797.1 MGP_LPJ_G0005609.1 mouse_genomes_project 15 78295296 78300749 + Gm17638 lincRNA lincRNA MGP_LPJ_T0100381.1 MGP_LPJ_G0038644.1 mouse_genomes_project 15 33742247 33742394 + Gm24771 snoRNA snoRNA MGP_LPJ_T0041974.1 MGP_LPJ_G0022113.1 mouse_genomes_project 15 90322123 90334237 + Mov10l1 protein_coding retained_intron MGP_LPJ_T0041975.1 MGP_LPJ_G0022113.1 mouse_genomes_project 15 90322123 90387132 + MGP_LPJ_P0041975 Mov10l1 protein_coding protein_coding MGP_LPJ_T0041976.1 MGP_LPJ_G0022113.1 mouse_genomes_project 15 90322208 90387136 + MGP_LPJ_P0041976 Mov10l1 protein_coding protein_coding MGP_LPJ_T0041977.1 MGP_LPJ_G0022113.1 mouse_genomes_project 15 90359360 90362561 + Mov10l1 protein_coding processed_transcript MGP_LPJ_T0041978.1 MGP_LPJ_G0022113.1 mouse_genomes_project 15 90362552 90387132 + MGP_LPJ_P0041978 Mov10l1 protein_coding protein_coding MGP_LPJ_T0042279.1 MGP_LPJ_G0022200.1 mouse_genomes_project 15 100405540 100420918 - MGP_LPJ_P0042279 Kansl2 protein_coding protein_coding MGP_LPJ_T0042280.1 MGP_LPJ_G0022200.1 mouse_genomes_project 15 100405820 100420895 - MGP_LPJ_P0042280 Kansl2 protein_coding protein_coding MGP_LPJ_T0041887.1 MGP_LPJ_G0022081.1 mouse_genomes_project 15 85685556 85732610 + MGP_LPJ_P0041887 Arhgap8 protein_coding protein_coding MGP_LPJ_T0041888.1 MGP_LPJ_G0022081.1 mouse_genomes_project 15 85685556 85732610 + MGP_LPJ_P0041888 Arhgap8 protein_coding protein_coding MGP_LPJ_T0041889.1 MGP_LPJ_G0022081.1 mouse_genomes_project 15 85685587 85719708 + Arhgap8 protein_coding retained_intron MGP_LPJ_T0041890.1 MGP_LPJ_G0022081.1 mouse_genomes_project 15 85700130 85732607 + MGP_LPJ_P0041890 Arhgap8 protein_coding protein_coding MGP_LPJ_T0041891.1 MGP_LPJ_G0022081.1 mouse_genomes_project 15 85709202 85726606 + Arhgap8 protein_coding processed_transcript MGP_LPJ_T0041892.1 MGP_LPJ_G0022081.1 mouse_genomes_project 15 85730279 85732343 + Arhgap8 protein_coding retained_intron MGP_LPJ_T0040610.1 MGP_LPJ_G0021688.1 mouse_genomes_project 15 33084959 33089918 + MGP_LPJ_P0040610 Kcns2 protein_coding protein_coding MGP_LPJ_T0042593.1 MGP_LPJ_G0022313.1 mouse_genomes_project 15 104685282 104695094 - MGP_LPJ_P0042593 Sp7 protein_coding protein_coding MGP_LPJ_T0100389.1 MGP_LPJ_G0038652.1 mouse_genomes_project 15 51284202 51284326 + Gm23267 snoRNA snoRNA MGP_LPJ_T0040857.1 MGP_LPJ_G0021782.1 mouse_genomes_project 15 57951932 57965422 + MGP_LPJ_P0040857 Rnf139 protein_coding protein_coding MGP_LPJ_T0040653.1 MGP_LPJ_G0021703.1 mouse_genomes_project 15 35191117 35200430 - MGP_LPJ_P0040653 Gm10384 protein_coding protein_coding MGP_LPJ_T0040728.1 MGP_LPJ_G0021732.1 mouse_genomes_project 15 42563513 42604235 + MGP_LPJ_P0040728 Trhr protein_coding protein_coding MGP_LPJ_T0040729.1 MGP_LPJ_G0021732.1 mouse_genomes_project 15 42563611 42602490 + MGP_LPJ_P0040729 Trhr protein_coding protein_coding MGP_LPJ_T0041103.1 MGP_LPJ_G0021858.1 mouse_genomes_project 15 75775141 75796899 - MGP_LPJ_P0041103 Top1mt protein_coding protein_coding MGP_LPJ_T0013082.1 MGP_LPJ_G0011173.1 mouse_genomes_project 15 75982834 75984244 - processed_pseudogene processed_pseudogene MGP_LPJ_T0041400.1 MGP_LPJ_G0021935.1 mouse_genomes_project 15 78292620 78304447 - MGP_LPJ_P0041400 Eif3d protein_coding protein_coding MGP_LPJ_T0006796.1 MGP_LPJ_G0005608.1 mouse_genomes_project 15 77292330 77304198 + 1700109K24Rik lincRNA lincRNA MGP_LPJ_T0040509.1 MGP_LPJ_G0021649.1 mouse_genomes_project 15 18765878 19264471 + MGP_LPJ_P0040509 Cdh12 protein_coding protein_coding MGP_LPJ_T0042248.1 MGP_LPJ_G0022185.1 mouse_genomes_project 15 99900327 99937563 + MGP_LPJ_P0042248 Pfkm protein_coding protein_coding MGP_LPJ_T0042137.1 MGP_LPJ_G0022153.1 mouse_genomes_project 15 94752871 94789874 - MGP_LPJ_P0042137 Gxylt1 protein_coding protein_coding MGP_LPJ_T0042138.1 MGP_LPJ_G0022153.1 mouse_genomes_project 15 94757657 94789864 - MGP_LPJ_P0042138 Gxylt1 protein_coding protein_coding MGP_LPJ_T0040949.1 MGP_LPJ_G0021811.1 mouse_genomes_project 15 66309066 66340946 + MGP_LPJ_P0040949 Wisp1 protein_coding protein_coding MGP_LPJ_T0040950.1 MGP_LPJ_G0021811.1 mouse_genomes_project 15 66309133 66337822 + MGP_LPJ_P0040950 Wisp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0040951.1 MGP_LPJ_G0021811.1 mouse_genomes_project 15 66309254 66337200 + MGP_LPJ_P0040951 Wisp1 protein_coding protein_coding MGP_LPJ_T0040952.1 MGP_LPJ_G0021811.1 mouse_genomes_project 15 66327057 66336980 + Wisp1 protein_coding processed_transcript MGP_LPJ_T0006812.1 MGP_LPJ_G0005620.1 mouse_genomes_project 15 93043160 93051670 + 4933438A12Rik lincRNA lincRNA MGP_LPJ_T0042033.1 MGP_LPJ_G0022126.1 mouse_genomes_project 15 90681121 90683739 + MGP_LPJ_P0042033 Miox protein_coding protein_coding MGP_LPJ_T0042034.1 MGP_LPJ_G0022126.1 mouse_genomes_project 15 90681184 90682848 + Miox protein_coding retained_intron MGP_LPJ_T0042035.1 MGP_LPJ_G0022126.1 mouse_genomes_project 15 90681363 90683359 + Miox protein_coding retained_intron MGP_LPJ_T0042036.1 MGP_LPJ_G0022126.1 mouse_genomes_project 15 90681653 90683136 + MGP_LPJ_P0042036 Miox protein_coding nonsense_mediated_decay MGP_LPJ_T0042037.1 MGP_LPJ_G0022126.1 mouse_genomes_project 15 90681654 90683138 + Miox protein_coding retained_intron MGP_LPJ_T0042038.1 MGP_LPJ_G0022126.1 mouse_genomes_project 15 90683156 90683735 + MGP_LPJ_P0042038 Miox protein_coding protein_coding MGP_LPJ_T0041436.1 MGP_LPJ_G0021950.1 mouse_genomes_project 15 79091679 79140631 - MGP_LPJ_P0041436 Elfn2 protein_coding protein_coding MGP_LPJ_T0041455.1 MGP_LPJ_G0021958.1 mouse_genomes_project 15 79368617 79374595 + MGP_LPJ_P0041455 Nol12 protein_coding protein_coding MGP_LPJ_T0041456.1 MGP_LPJ_G0021958.1 mouse_genomes_project 15 79368656 79374291 + MGP_LPJ_P0041456 Nol12 protein_coding protein_coding MGP_LPJ_T0041457.1 MGP_LPJ_G0021958.1 mouse_genomes_project 15 79368661 79374527 + MGP_LPJ_P0041457 Nol12 protein_coding protein_coding MGP_LPJ_T0041458.1 MGP_LPJ_G0021958.1 mouse_genomes_project 15 79368874 79370248 + MGP_LPJ_P0041458 Nol12 protein_coding protein_coding MGP_LPJ_T0013069.1 MGP_LPJ_G0011160.1 mouse_genomes_project 15 44386570 44388799 - processed_pseudogene processed_pseudogene MGP_LPJ_T0040820.1 MGP_LPJ_G0021767.1 mouse_genomes_project 15 56909280 56968898 + MGP_LPJ_P0040820 Tbc1d31 protein_coding protein_coding MGP_LPJ_T0040821.1 MGP_LPJ_G0021767.1 mouse_genomes_project 15 56909315 56958239 + Tbc1d31 protein_coding processed_transcript MGP_LPJ_T0040822.1 MGP_LPJ_G0021767.1 mouse_genomes_project 15 56909320 56917029 + MGP_LPJ_P0040822 Tbc1d31 protein_coding nonsense_mediated_decay MGP_LPJ_T0040823.1 MGP_LPJ_G0021767.1 mouse_genomes_project 15 56910086 56958319 + Tbc1d31 protein_coding retained_intron MGP_LPJ_T0040824.1 MGP_LPJ_G0021767.1 mouse_genomes_project 15 56910936 56952872 + Tbc1d31 protein_coding retained_intron MGP_LPJ_T0040825.1 MGP_LPJ_G0021767.1 mouse_genomes_project 15 56913094 56954185 + Tbc1d31 protein_coding retained_intron MGP_LPJ_T0040826.1 MGP_LPJ_G0021767.1 mouse_genomes_project 15 56957249 56968904 + MGP_LPJ_P0040826 Tbc1d31 protein_coding protein_coding MGP_LPJ_T0041909.1 MGP_LPJ_G0022090.1 mouse_genomes_project 15 86219124 86309510 + MGP_LPJ_P0041909 Fbln1 protein_coding protein_coding MGP_LPJ_T0041910.1 MGP_LPJ_G0022090.1 mouse_genomes_project 15 86219180 86272134 + MGP_LPJ_P0041910 Fbln1 protein_coding protein_coding MGP_LPJ_T0041911.1 MGP_LPJ_G0022090.1 mouse_genomes_project 15 86283688 86285707 + Fbln1 protein_coding processed_transcript MGP_LPJ_T0100404.1 MGP_LPJ_G0038667.1 mouse_genomes_project 15 96280808 96280940 - Gm25546 snoRNA snoRNA MGP_LPJ_T0040819.1 MGP_LPJ_G0021766.1 mouse_genomes_project 15 56869064 56889887 - MGP_LPJ_P0040819 Derl1 protein_coding unknown_likely_coding MGP_LPJ_T0042525.1 MGP_LPJ_G0022278.1 mouse_genomes_project 15 103703805 103710316 - MGP_LPJ_P0042525 Krt83 protein_coding protein_coding MGP_LPJ_T0006799.1 MGP_LPJ_G0005611.1 mouse_genomes_project 15 80176721 80179972 - Gm26884 lincRNA lincRNA MGP_LPJ_T0100365.1 MGP_LPJ_G0038628.1 mouse_genomes_project 15 3034456 3034588 - Gm23139 snoRNA snoRNA MGP_LPJ_T0040458.1 MGP_LPJ_G0021633.1 mouse_genomes_project 15 8108184 8112459 - MGP_LPJ_P0040458 Rxfp3 protein_coding protein_coding MGP_LPJ_T0042192.1 MGP_LPJ_G0022175.1 mouse_genomes_project 15 99001025 99147395 + MGP_LPJ_P0042192 Pced1b protein_coding protein_coding MGP_LPJ_T0042594.1 MGP_LPJ_G0022314.1 mouse_genomes_project 15 104736982 104739546 + MGP_LPJ_P0042594 Sp1 protein_coding protein_coding MGP_LPJ_T0042595.1 MGP_LPJ_G0022314.1 mouse_genomes_project 15 104737167 104765144 + MGP_LPJ_P0042595 Sp1 protein_coding protein_coding MGP_LPJ_T0042596.1 MGP_LPJ_G0022314.1 mouse_genomes_project 15 104737172 104765144 + MGP_LPJ_P0042596 Sp1 protein_coding protein_coding MGP_LPJ_T0042597.1 MGP_LPJ_G0022314.1 mouse_genomes_project 15 104737219 104768868 + MGP_LPJ_P0042597 Sp1 protein_coding protein_coding MGP_LPJ_T0042598.1 MGP_LPJ_G0022314.1 mouse_genomes_project 15 104738065 104739928 + MGP_LPJ_P0042598 Sp1 protein_coding protein_coding MGP_LPJ_T0042599.1 MGP_LPJ_G0022314.1 mouse_genomes_project 15 104738580 104739546 + MGP_LPJ_P0042599 Sp1 protein_coding protein_coding MGP_LPJ_T0042600.1 MGP_LPJ_G0022314.1 mouse_genomes_project 15 104738899 104739696 + MGP_LPJ_P0042600 Sp1 protein_coding protein_coding MGP_LPJ_T0042601.1 MGP_LPJ_G0022314.1 mouse_genomes_project 15 104762368 104763283 + Sp1 protein_coding processed_transcript MGP_LPJ_T0042149.1 MGP_LPJ_G0022156.1 mouse_genomes_project 15 94919895 95017938 + MGP_LPJ_P0042149 Pphln1 protein_coding protein_coding MGP_LPJ_T0042150.1 MGP_LPJ_G0022156.1 mouse_genomes_project 15 94919895 95017938 + MGP_LPJ_P0042150 Pphln1 protein_coding protein_coding MGP_LPJ_T0042151.1 MGP_LPJ_G0022156.1 mouse_genomes_project 15 94919895 95017938 + MGP_LPJ_P0042151 Pphln1 protein_coding protein_coding MGP_LPJ_T0042152.1 MGP_LPJ_G0022156.1 mouse_genomes_project 15 94920009 95017524 + MGP_LPJ_P0042152 Pphln1 protein_coding protein_coding MGP_LPJ_T0040877.1 MGP_LPJ_G0021793.1 mouse_genomes_project 15 60092722 60096404 - MGP_LPJ_P0040877 A1bg protein_coding protein_coding MGP_LPJ_T0003622.1 MGP_LPJ_G0003286.1 mouse_genomes_project 15 75779513 75781636 + Gm15945 antisense antisense MGP_LPJ_T0101901.1 MGP_LPJ_G0039938.1 mouse_genomes_project 15 83543795 83547975 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0040459.1 MGP_LPJ_G0021634.1 mouse_genomes_project 15 8140807 8440676 + MGP_LPJ_P0040459 Adamts12 protein_coding protein_coding MGP_LPJ_T0040314.1 MGP_LPJ_G0021593.1 mouse_genomes_project 15 1812188 1894123 - MGP_LPJ_P0040314 C7 protein_coding protein_coding MGP_LPJ_T0099141.1 MGP_LPJ_G0037404.1 mouse_genomes_project 15 90358160 90358319 + Gm23737 snRNA snRNA MGP_LPJ_T0040741.1 MGP_LPJ_G0021739.1 mouse_genomes_project 15 46041466 47364913 - MGP_LPJ_P0040741 Csmd3 protein_coding protein_coding MGP_LPJ_T0040742.1 MGP_LPJ_G0021739.1 mouse_genomes_project 15 46041467 47364969 - MGP_LPJ_P0040742 Csmd3 protein_coding protein_coding MGP_LPJ_T0040743.1 MGP_LPJ_G0021739.1 mouse_genomes_project 15 46041551 47365043 - MGP_LPJ_P0040743 Csmd3 protein_coding protein_coding MGP_LPJ_T0040744.1 MGP_LPJ_G0021739.1 mouse_genomes_project 15 46042551 46510811 - MGP_LPJ_P0040744 Csmd3 protein_coding protein_coding MGP_LPJ_T0040745.1 MGP_LPJ_G0021739.1 mouse_genomes_project 15 46042554 46076884 - Csmd3 protein_coding retained_intron MGP_LPJ_T0040746.1 MGP_LPJ_G0021739.1 mouse_genomes_project 15 46094508 46099256 - Csmd3 protein_coding retained_intron MGP_LPJ_T0040747.1 MGP_LPJ_G0021739.1 mouse_genomes_project 15 46441600 46459810 - Csmd3 protein_coding retained_intron MGP_LPJ_T0040748.1 MGP_LPJ_G0021739.1 mouse_genomes_project 15 46779557 47364969 - Csmd3 protein_coding processed_transcript MGP_LPJ_T0040749.1 MGP_LPJ_G0021739.1 mouse_genomes_project 15 46804928 47364969 - Csmd3 protein_coding retained_intron MGP_LPJ_T0041828.1 MGP_LPJ_G0022062.1 mouse_genomes_project 15 84161867 84219407 - MGP_LPJ_P0041828 Arfgap3 protein_coding protein_coding MGP_LPJ_T0041829.1 MGP_LPJ_G0022062.1 mouse_genomes_project 15 84162004 84219309 - MGP_LPJ_P0041829 Arfgap3 protein_coding unknown_likely_coding MGP_LPJ_T0042131.1 MGP_LPJ_G0022151.1 mouse_genomes_project 15 93570960 93782492 + Cntn1 protein_coding retained_intron MGP_LPJ_T0042132.1 MGP_LPJ_G0022151.1 mouse_genomes_project 15 93570960 93880676 + MGP_LPJ_P0042132 Cntn1 protein_coding protein_coding MGP_LPJ_T0042133.1 MGP_LPJ_G0022151.1 mouse_genomes_project 15 93651198 93880663 + MGP_LPJ_P0042133 Cntn1 protein_coding protein_coding MGP_LPJ_T0042134.1 MGP_LPJ_G0022151.1 mouse_genomes_project 15 93688406 93878826 + MGP_LPJ_P0042134 Cntn1 protein_coding protein_coding MGP_LPJ_T0017410.1 MGP_LPJ_G0015218.1 mouse_genomes_project 15 78451949 78476338 + A730060N03Rik processed_transcript processed_transcript MGP_LPJ_T0041046.1 MGP_LPJ_G0021840.1 mouse_genomes_project 15 74613255 74621172 - MGP_LPJ_P0041046 D730001G18Rik protein_coding protein_coding MGP_LPJ_T0041047.1 MGP_LPJ_G0021840.1 mouse_genomes_project 15 74613256 74621207 - MGP_LPJ_P0041047 D730001G18Rik protein_coding protein_coding MGP_LPJ_T0041624.1 MGP_LPJ_G0022000.1 mouse_genomes_project 15 80979797 81096185 - MGP_LPJ_P0041624 Enthd1 protein_coding protein_coding MGP_LPJ_T0042088.1 MGP_LPJ_G0022141.1 mouse_genomes_project 15 90959388 90969772 - MGP_LPJ_P0042088 Rabl2 protein_coding protein_coding MGP_LPJ_T0042089.1 MGP_LPJ_G0022141.1 mouse_genomes_project 15 90959392 90969714 - Rabl2 protein_coding retained_intron MGP_LPJ_T0042090.1 MGP_LPJ_G0022141.1 mouse_genomes_project 15 90959392 90969713 - MGP_LPJ_P0042090 Rabl2 protein_coding protein_coding MGP_LPJ_T0042091.1 MGP_LPJ_G0022141.1 mouse_genomes_project 15 90959900 90968251 - MGP_LPJ_P0042091 Rabl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0042092.1 MGP_LPJ_G0022141.1 mouse_genomes_project 15 90960170 90961410 - Rabl2 protein_coding retained_intron MGP_LPJ_T0042093.1 MGP_LPJ_G0022141.1 mouse_genomes_project 15 90960212 90969739 - MGP_LPJ_P0042093 Rabl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0042094.1 MGP_LPJ_G0022141.1 mouse_genomes_project 15 90960240 90969688 - MGP_LPJ_P0042094 Rabl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0042095.1 MGP_LPJ_G0022141.1 mouse_genomes_project 15 90960255 90961185 - MGP_LPJ_P0042095 Rabl2 protein_coding protein_coding MGP_LPJ_T0042096.1 MGP_LPJ_G0022141.1 mouse_genomes_project 15 90960501 90969735 - MGP_LPJ_P0042096 Rabl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0042097.1 MGP_LPJ_G0022141.1 mouse_genomes_project 15 90963095 90969754 - Rabl2 protein_coding retained_intron MGP_LPJ_T0042098.1 MGP_LPJ_G0022141.1 mouse_genomes_project 15 90965756 90969725 - Rabl2 protein_coding processed_transcript MGP_LPJ_T0100385.1 MGP_LPJ_G0038648.1 mouse_genomes_project 15 42722749 42722875 + Gm24903 snoRNA snoRNA MGP_LPJ_T0040875.1 MGP_LPJ_G0021792.1 mouse_genomes_project 15 59984936 59991023 - MGP_LPJ_P0040875 Fam84b protein_coding protein_coding MGP_LPJ_T0040876.1 MGP_LPJ_G0021792.1 mouse_genomes_project 15 59990974 60025395 - Fam84b protein_coding processed_transcript MGP_LPJ_T0040351.1 MGP_LPJ_G0021604.1 mouse_genomes_project 15 3716466 3798646 - MGP_LPJ_P0040351 Osmr protein_coding protein_coding MGP_LPJ_T0040352.1 MGP_LPJ_G0021604.1 mouse_genomes_project 15 3717926 3798646 - MGP_LPJ_P0040352 Osmr protein_coding protein_coding MGP_LPJ_T0040353.1 MGP_LPJ_G0021604.1 mouse_genomes_project 15 3727967 3731906 - Osmr protein_coding retained_intron MGP_LPJ_T0040354.1 MGP_LPJ_G0021604.1 mouse_genomes_project 15 3743929 3797945 - Osmr protein_coding retained_intron MGP_LPJ_T0040355.1 MGP_LPJ_G0021604.1 mouse_genomes_project 15 3765750 3797934 - Osmr protein_coding retained_intron MGP_LPJ_T0040356.1 MGP_LPJ_G0021604.1 mouse_genomes_project 15 3776769 3797973 - Osmr protein_coding retained_intron MGP_LPJ_T0006826.1 MGP_LPJ_G0005629.1 mouse_genomes_project 15 103408053 103410979 - A330009N23Rik lincRNA lincRNA MGP_LPJ_T0003602.1 MGP_LPJ_G0003269.1 mouse_genomes_project 15 917182 919757 - Gm15632 antisense antisense MGP_LPJ_T0000976.1 MGP_LPJ_G0000904.1 mouse_genomes_project 15 94012065 94014951 + TEC TEC MGP_LPJ_T0010043.1 MGP_LPJ_G0008161.1 mouse_genomes_project 15 12050219 12050451 - Gm24080 miRNA miRNA MGP_LPJ_T0006765.1 MGP_LPJ_G0005589.1 mouse_genomes_project 15 30412609 30413265 + 4930518I17Rik lincRNA lincRNA MGP_LPJ_T0042099.1 MGP_LPJ_G0022142.1 mouse_genomes_project 15 91155856 91222581 - MGP_LPJ_P0042099 Syt10 protein_coding protein_coding MGP_LPJ_T0041868.1 MGP_LPJ_G0022074.1 mouse_genomes_project 15 85089866 85113343 + MGP_LPJ_P0041868 Pnpla3 protein_coding protein_coding MGP_LPJ_T0041869.1 MGP_LPJ_G0022074.1 mouse_genomes_project 15 85094703 85111619 + MGP_LPJ_P0041869 Pnpla3 protein_coding unknown_likely_coding MGP_LPJ_T0101489.1 MGP_LPJ_G0039631.1 mouse_genomes_project 15 63115392 63117358 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101490.1 MGP_LPJ_G0039631.1 mouse_genomes_project 15 63116147 63119333 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0041867.1 MGP_LPJ_G0022073.1 mouse_genomes_project 15 85030571 85044133 - MGP_LPJ_P0041867 Pnpla5 protein_coding protein_coding MGP_LPJ_T0010074.1 MGP_LPJ_G0008192.1 mouse_genomes_project 15 79934006 79934083 + Gm44302 miRNA miRNA MGP_LPJ_T0040758.1 MGP_LPJ_G0021741.1 mouse_genomes_project 15 50526637 50608257 - MGP_LPJ_P0040758 Eif3h protein_coding protein_coding MGP_LPJ_T0010070.1 MGP_LPJ_G0008188.1 mouse_genomes_project 15 78744701 78744763 + Mir7676-2 miRNA miRNA MGP_LPJ_T0042223.1 MGP_LPJ_G0022181.1 mouse_genomes_project 15 99641537 99699293 - MGP_LPJ_P0042223 Vdr protein_coding protein_coding MGP_LPJ_T0042224.1 MGP_LPJ_G0022181.1 mouse_genomes_project 15 99644638 99646794 - Vdr protein_coding retained_intron MGP_LPJ_T0042225.1 MGP_LPJ_G0022181.1 mouse_genomes_project 15 99663939 99687809 - MGP_LPJ_P0042225 Vdr protein_coding protein_coding MGP_LPJ_T0042226.1 MGP_LPJ_G0022181.1 mouse_genomes_project 15 99664011 99702745 - MGP_LPJ_P0042226 Vdr protein_coding protein_coding MGP_LPJ_T0042227.1 MGP_LPJ_G0022181.1 mouse_genomes_project 15 99673935 99702745 - MGP_LPJ_P0042227 Vdr protein_coding protein_coding MGP_LPJ_T0042228.1 MGP_LPJ_G0022181.1 mouse_genomes_project 15 99673947 99700545 - MGP_LPJ_P0042228 Vdr protein_coding protein_coding MGP_LPJ_T0098702.1 MGP_LPJ_G0036969.1 mouse_genomes_project 15 90219124 90220851 - Gm20621 sense_overlapping sense_overlapping MGP_LPJ_T0098703.1 MGP_LPJ_G0036969.1 mouse_genomes_project 15 90219842 90220860 - Gm20621 sense_overlapping sense_overlapping MGP_LPJ_T0098704.1 MGP_LPJ_G0036969.1 mouse_genomes_project 15 90219847 90220818 - Gm20621 sense_overlapping sense_overlapping MGP_LPJ_T0040402.1 MGP_LPJ_G0021617.1 mouse_genomes_project 15 6292686 6330699 + Ugt3a1 protein_coding processed_transcript MGP_LPJ_T0040403.1 MGP_LPJ_G0021617.1 mouse_genomes_project 15 6299925 6335216 + MGP_LPJ_P0040403 Ugt3a1 protein_coding protein_coding MGP_LPJ_T0040404.1 MGP_LPJ_G0021617.1 mouse_genomes_project 15 6299944 6326395 + Ugt3a1 protein_coding processed_transcript MGP_LPJ_T0040405.1 MGP_LPJ_G0021617.1 mouse_genomes_project 15 6299946 6326317 + Ugt3a1 protein_coding processed_transcript MGP_LPJ_T0040406.1 MGP_LPJ_G0021617.1 mouse_genomes_project 15 6303606 6316682 + MGP_LPJ_P0040406 Ugt3a1 protein_coding protein_coding MGP_LPJ_T0042665.1 MGP_LPJ_G0022331.1 mouse_genomes_project 15 105347096 105352328 + MGP_LPJ_P0042665 Hoxc9 protein_coding protein_coding MGP_LPJ_T0042666.1 MGP_LPJ_G0022331.1 mouse_genomes_project 15 105347689 105355642 + MGP_LPJ_P0042666 Hoxc9 protein_coding protein_coding MGP_LPJ_T0041015.1 MGP_LPJ_G0021829.1 mouse_genomes_project 15 74334704 74432450 + MGP_LPJ_P0041015 Adgrb1 protein_coding protein_coding MGP_LPJ_T0041016.1 MGP_LPJ_G0021829.1 mouse_genomes_project 15 74334947 74432450 + MGP_LPJ_P0041016 Adgrb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0041017.1 MGP_LPJ_G0021829.1 mouse_genomes_project 15 74335340 74432450 + MGP_LPJ_P0041017 Adgrb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0041018.1 MGP_LPJ_G0021829.1 mouse_genomes_project 15 74358890 74361873 + MGP_LPJ_P0041018 Adgrb1 protein_coding protein_coding MGP_LPJ_T0041019.1 MGP_LPJ_G0021829.1 mouse_genomes_project 15 74392090 74414947 + MGP_LPJ_P0041019 Adgrb1 protein_coding protein_coding MGP_LPJ_T0041020.1 MGP_LPJ_G0021829.1 mouse_genomes_project 15 74394184 74413035 + MGP_LPJ_P0041020 Adgrb1 protein_coding protein_coding MGP_LPJ_T0041021.1 MGP_LPJ_G0021829.1 mouse_genomes_project 15 74394569 74413689 + MGP_LPJ_P0041021 Adgrb1 protein_coding protein_coding MGP_LPJ_T0041022.1 MGP_LPJ_G0021829.1 mouse_genomes_project 15 74394576 74432429 + MGP_LPJ_P0041022 Adgrb1 protein_coding protein_coding MGP_LPJ_T0041023.1 MGP_LPJ_G0021829.1 mouse_genomes_project 15 74394588 74432450 + MGP_LPJ_P0041023 Adgrb1 protein_coding protein_coding MGP_LPJ_T0041024.1 MGP_LPJ_G0021829.1 mouse_genomes_project 15 74411782 74432451 + Adgrb1 protein_coding processed_transcript MGP_LPJ_T0041025.1 MGP_LPJ_G0021829.1 mouse_genomes_project 15 74414970 74432451 + MGP_LPJ_P0041025 Adgrb1 protein_coding protein_coding MGP_LPJ_T0042061.1 MGP_LPJ_G0022135.1 mouse_genomes_project 15 90769157 90779237 - MGP_LPJ_P0042061 Cpt1b protein_coding protein_coding MGP_LPJ_T0042062.1 MGP_LPJ_G0022135.1 mouse_genomes_project 15 90771507 90774064 - MGP_LPJ_P0042062 Cpt1b protein_coding nonsense_mediated_decay MGP_LPJ_T0042063.1 MGP_LPJ_G0022135.1 mouse_genomes_project 15 90776420 90777128 - Cpt1b protein_coding retained_intron MGP_LPJ_T0003653.1 MGP_LPJ_G0003310.1 mouse_genomes_project 15 103309070 103312078 - antisense antisense MGP_LPJ_T0041433.1 MGP_LPJ_G0021947.1 mouse_genomes_project 15 78942443 78949776 - MGP_LPJ_P0041433 Sstr3 protein_coding protein_coding MGP_LPJ_T0040873.1 MGP_LPJ_G0021790.1 mouse_genomes_project 15 59108258 59109184 + MGP_LPJ_P0040873 Gm12355 protein_coding protein_coding MGP_LPJ_T0006775.1 MGP_LPJ_G0005599.1 mouse_genomes_project 15 41050891 41079069 + Gm17473 lincRNA lincRNA MGP_LPJ_T0041531.1 MGP_LPJ_G0021974.1 mouse_genomes_project 15 79873223 79897441 - MGP_LPJ_P0041531 Csnk1e protein_coding unknown_likely_coding MGP_LPJ_T0041532.1 MGP_LPJ_G0021974.1 mouse_genomes_project 15 79874493 79876660 - Csnk1e protein_coding retained_intron MGP_LPJ_T0041533.1 MGP_LPJ_G0021974.1 mouse_genomes_project 15 79877831 79898375 - MGP_LPJ_P0041533 Csnk1e protein_coding protein_coding MGP_LPJ_T0041534.1 MGP_LPJ_G0021974.1 mouse_genomes_project 15 79878993 79879649 - Csnk1e protein_coding retained_intron MGP_LPJ_T0041535.1 MGP_LPJ_G0021974.1 mouse_genomes_project 15 79879515 79880909 - Csnk1e protein_coding retained_intron MGP_LPJ_T0041536.1 MGP_LPJ_G0021974.1 mouse_genomes_project 15 79880087 79881794 - Csnk1e protein_coding retained_intron MGP_LPJ_T0041537.1 MGP_LPJ_G0021974.1 mouse_genomes_project 15 79880205 79885210 - Csnk1e protein_coding retained_intron MGP_LPJ_T0041538.1 MGP_LPJ_G0021974.1 mouse_genomes_project 15 79881748 79895578 - MGP_LPJ_P0041538 Csnk1e protein_coding protein_coding MGP_LPJ_T0041539.1 MGP_LPJ_G0021974.1 mouse_genomes_project 15 79881817 79898375 - MGP_LPJ_P0041539 Csnk1e protein_coding protein_coding MGP_LPJ_T0041540.1 MGP_LPJ_G0021974.1 mouse_genomes_project 15 79885389 79900478 - MGP_LPJ_P0041540 Csnk1e protein_coding protein_coding MGP_LPJ_T0042292.1 MGP_LPJ_G0022204.1 mouse_genomes_project 15 100530840 100543668 + MGP_LPJ_P0042292 Cacnb3 protein_coding protein_coding MGP_LPJ_T0042293.1 MGP_LPJ_G0022204.1 mouse_genomes_project 15 100533385 100543668 + MGP_LPJ_P0042293 Cacnb3 protein_coding protein_coding MGP_LPJ_T0099137.1 MGP_LPJ_G0037400.1 mouse_genomes_project 15 83988041 83988192 + Rnu12 snRNA snRNA MGP_LPJ_T0042239.1 MGP_LPJ_G0022184.1 mouse_genomes_project 15 99842609 99897913 - MGP_LPJ_P0042239 Senp1 protein_coding protein_coding MGP_LPJ_T0042240.1 MGP_LPJ_G0022184.1 mouse_genomes_project 15 99842619 99867254 - Senp1 protein_coding retained_intron MGP_LPJ_T0042241.1 MGP_LPJ_G0022184.1 mouse_genomes_project 15 99842780 99898783 - MGP_LPJ_P0042241 Senp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0042242.1 MGP_LPJ_G0022184.1 mouse_genomes_project 15 99843120 99898465 - MGP_LPJ_P0042242 Senp1 protein_coding protein_coding MGP_LPJ_T0042243.1 MGP_LPJ_G0022184.1 mouse_genomes_project 15 99844271 99850329 - Senp1 protein_coding processed_transcript MGP_LPJ_T0042244.1 MGP_LPJ_G0022184.1 mouse_genomes_project 15 99866120 99898584 - Senp1 protein_coding retained_intron MGP_LPJ_T0042245.1 MGP_LPJ_G0022184.1 mouse_genomes_project 15 99890262 99892765 - MGP_LPJ_P0042245 Senp1 protein_coding protein_coding MGP_LPJ_T0042246.1 MGP_LPJ_G0022184.1 mouse_genomes_project 15 99893777 99898519 - Senp1 protein_coding processed_transcript MGP_LPJ_T0042247.1 MGP_LPJ_G0022184.1 mouse_genomes_project 15 99894411 99898101 - Senp1 protein_coding processed_transcript MGP_LPJ_T0040553.1 MGP_LPJ_G0021667.1 mouse_genomes_project 15 29367556 29367973 + MGP_LPJ_P0040553 Fam136b-ps protein_coding protein_coding MGP_LPJ_T0042331.1 MGP_LPJ_G0022220.1 mouse_genomes_project 15 101013578 101022103 + MGP_LPJ_P0042331 Troap protein_coding protein_coding MGP_LPJ_T0003617.1 MGP_LPJ_G0003282.1 mouse_genomes_project 15 66347350 66348851 + Gm17035 antisense antisense MGP_LPJ_T0099140.1 MGP_LPJ_G0037403.1 mouse_genomes_project 15 90146462 90146569 + Gm23144 snRNA snRNA MGP_LPJ_T0040730.1 MGP_LPJ_G0021733.1 mouse_genomes_project 15 42754901 42811770 - MGP_LPJ_P0040730 Nudcd1 protein_coding protein_coding MGP_LPJ_T0040731.1 MGP_LPJ_G0021733.1 mouse_genomes_project 15 42756068 42811240 - MGP_LPJ_P0040731 Nudcd1 protein_coding unknown_likely_coding MGP_LPJ_T0041377.1 MGP_LPJ_G0021929.1 mouse_genomes_project 15 77906422 77912351 - MGP_LPJ_P0041377 protein_coding protein_coding MGP_LPJ_T0041034.1 MGP_LPJ_G0021832.1 mouse_genomes_project 15 74544086 74551321 - MGP_LPJ_P0041034 Jrk protein_coding protein_coding MGP_LPJ_T0041528.1 MGP_LPJ_G0021973.1 mouse_genomes_project 15 79812280 79858711 - MGP_LPJ_P0041528 Tmem184b protein_coding unknown_likely_coding MGP_LPJ_T0041529.1 MGP_LPJ_G0021973.1 mouse_genomes_project 15 79812285 79858772 - MGP_LPJ_P0041529 Tmem184b protein_coding protein_coding MGP_LPJ_T0041530.1 MGP_LPJ_G0021973.1 mouse_genomes_project 15 79812285 79858388 - MGP_LPJ_P0041530 Tmem184b protein_coding protein_coding MGP_LPJ_T0040871.1 MGP_LPJ_G0021789.1 mouse_genomes_project 15 58757462 58765662 + MGP_LPJ_P0040871 Trib1 protein_coding protein_coding MGP_LPJ_T0040872.1 MGP_LPJ_G0021789.1 mouse_genomes_project 15 58757765 58762801 + MGP_LPJ_P0040872 Trib1 protein_coding protein_coding MGP_LPJ_T0100403.1 MGP_LPJ_G0038666.1 mouse_genomes_project 15 85262134 85262278 - Gm22890 snoRNA snoRNA MGP_LPJ_T0040628.1 MGP_LPJ_G0021695.1 mouse_genomes_project 15 34454402 34457283 + MGP_LPJ_P0040628 Polr2k protein_coding protein_coding MGP_LPJ_T0040629.1 MGP_LPJ_G0021695.1 mouse_genomes_project 15 34454425 34457286 + MGP_LPJ_P0040629 Polr2k protein_coding protein_coding MGP_LPJ_T0042708.1 MGP_LPJ_G0022348.1 mouse_genomes_project 15 105986609 105988926 - MGP_LPJ_P0042708 Glycam1 protein_coding protein_coding MGP_LPJ_T0017379.1 MGP_LPJ_G0015205.1 mouse_genomes_project 15 868462 872842 - BC037032 processed_transcript TEC MGP_LPJ_T0017380.1 MGP_LPJ_G0015205.1 mouse_genomes_project 15 870034 875740 - BC037032 processed_transcript antisense MGP_LPJ_T0017381.1 MGP_LPJ_G0015205.1 mouse_genomes_project 15 870719 875749 - BC037032 processed_transcript antisense MGP_LPJ_T0017382.1 MGP_LPJ_G0015205.1 mouse_genomes_project 15 871323 875752 - BC037032 processed_transcript antisense MGP_LPJ_T0017383.1 MGP_LPJ_G0015205.1 mouse_genomes_project 15 871919 874427 - BC037032 processed_transcript antisense MGP_LPJ_T0017384.1 MGP_LPJ_G0015205.1 mouse_genomes_project 15 874747 875499 - BC037032 processed_transcript antisense MGP_LPJ_T0042304.1 MGP_LPJ_G0022208.1 mouse_genomes_project 15 100627134 100631714 - MGP_LPJ_P0042304 Fkbp11 protein_coding protein_coding MGP_LPJ_T0017385.1 MGP_LPJ_G0015206.1 mouse_genomes_project 15 4334245 4347728 + Gm16029 processed_transcript processed_transcript MGP_LPJ_T0013057.1 MGP_LPJ_G0011148.1 mouse_genomes_project 15 34402948 34403907 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099122.1 MGP_LPJ_G0037385.1 mouse_genomes_project 15 62773232 62773295 - Gm25702 snRNA snRNA MGP_LPJ_T0041468.1 MGP_LPJ_G0021960.1 mouse_genomes_project 15 79467197 79469484 + MGP_LPJ_P0041468 H1f0 protein_coding protein_coding MGP_LPJ_T0099145.1 MGP_LPJ_G0037408.1 mouse_genomes_project 15 98391710 98391818 + Gm22045 snRNA snRNA MGP_LPJ_T0099135.1 MGP_LPJ_G0037398.1 mouse_genomes_project 15 81600273 81600424 + Gm25131 snRNA snRNA MGP_LPJ_T0042017.1 MGP_LPJ_G0022123.1 mouse_genomes_project 15 90545279 90632539 + MGP_LPJ_P0042017 Ppp6r2 protein_coding unknown_likely_coding MGP_LPJ_T0042018.1 MGP_LPJ_G0022123.1 mouse_genomes_project 15 90597231 90631795 + MGP_LPJ_P0042018 Ppp6r2 protein_coding protein_coding MGP_LPJ_T0011417.1 MGP_LPJ_G0009535.1 mouse_genomes_project 15 105318297 105318395 + Gm27443 misc_RNA misc_RNA MGP_LPJ_T0040660.1 MGP_LPJ_G0021706.1 mouse_genomes_project 15 35686486 36121263 - MGP_LPJ_P0040660 Ncald protein_coding protein_coding MGP_LPJ_T0040661.1 MGP_LPJ_G0021706.1 mouse_genomes_project 15 35686486 36121696 - MGP_LPJ_P0040661 Ncald protein_coding protein_coding MGP_LPJ_T0040662.1 MGP_LPJ_G0021706.1 mouse_genomes_project 15 35686529 35787928 - MGP_LPJ_P0040662 Ncald protein_coding protein_coding MGP_LPJ_T0040663.1 MGP_LPJ_G0021706.1 mouse_genomes_project 15 35686578 35787917 - MGP_LPJ_P0040663 Ncald protein_coding protein_coding MGP_LPJ_T0040664.1 MGP_LPJ_G0021706.1 mouse_genomes_project 15 35688935 35787109 - MGP_LPJ_P0040664 Ncald protein_coding protein_coding MGP_LPJ_T0040665.1 MGP_LPJ_G0021706.1 mouse_genomes_project 15 35689199 36062327 - MGP_LPJ_P0040665 Ncald protein_coding protein_coding MGP_LPJ_T0040666.1 MGP_LPJ_G0021706.1 mouse_genomes_project 15 35692423 36121263 - MGP_LPJ_P0040666 Ncald protein_coding protein_coding MGP_LPJ_T0040667.1 MGP_LPJ_G0021706.1 mouse_genomes_project 15 35700086 35787900 - Ncald protein_coding processed_transcript MGP_LPJ_T0040668.1 MGP_LPJ_G0021706.1 mouse_genomes_project 15 35723490 36121833 - MGP_LPJ_P0040668 Ncald protein_coding protein_coding MGP_LPJ_T0040670.1 MGP_LPJ_G0021706.1 mouse_genomes_project 15 35760995 36062028 - Ncald protein_coding processed_transcript MGP_LPJ_T0040671.1 MGP_LPJ_G0021706.1 mouse_genomes_project 15 35947217 36062327 - Ncald protein_coding processed_transcript MGP_LPJ_T0040672.1 MGP_LPJ_G0021706.1 mouse_genomes_project 15 35948584 36121502 - Ncald protein_coding processed_transcript MGP_LPJ_T0041032.1 MGP_LPJ_G0021831.1 mouse_genomes_project 15 74511034 74514518 - MGP_LPJ_P0041032 Arc protein_coding protein_coding MGP_LPJ_T0041033.1 MGP_LPJ_G0021831.1 mouse_genomes_project 15 74511034 74514520 - MGP_LPJ_P0041033 Arc protein_coding protein_coding MGP_LPJ_T0099133.1 MGP_LPJ_G0037396.1 mouse_genomes_project 15 78161148 78161248 - Gm22107 snRNA snRNA MGP_LPJ_T0040929.1 MGP_LPJ_G0021804.1 mouse_genomes_project 15 65309268 65355866 - MGP_LPJ_P0040929 Hhla1 protein_coding protein_coding MGP_LPJ_T0041115.1 MGP_LPJ_G0021865.1 mouse_genomes_project 15 76024100 76038658 - MGP_LPJ_P0041115 Eef1d protein_coding protein_coding MGP_LPJ_T0041116.1 MGP_LPJ_G0021865.1 mouse_genomes_project 15 76024104 76038643 - MGP_LPJ_P0041116 Eef1d protein_coding protein_coding MGP_LPJ_T0041117.1 MGP_LPJ_G0021865.1 mouse_genomes_project 15 76024104 76038637 - MGP_LPJ_P0041117 Eef1d protein_coding protein_coding MGP_LPJ_T0041118.1 MGP_LPJ_G0021865.1 mouse_genomes_project 15 76024792 76032861 - MGP_LPJ_P0041118 Eef1d protein_coding protein_coding MGP_LPJ_T0041119.1 MGP_LPJ_G0021865.1 mouse_genomes_project 15 76024792 76038609 - MGP_LPJ_P0041119 Eef1d protein_coding protein_coding MGP_LPJ_T0041120.1 MGP_LPJ_G0021865.1 mouse_genomes_project 15 76024792 76038600 - MGP_LPJ_P0041120 Eef1d protein_coding protein_coding MGP_LPJ_T0041121.1 MGP_LPJ_G0021865.1 mouse_genomes_project 15 76024794 76038638 - MGP_LPJ_P0041121 Eef1d protein_coding protein_coding MGP_LPJ_T0041122.1 MGP_LPJ_G0021865.1 mouse_genomes_project 15 76024794 76038622 - MGP_LPJ_P0041122 Eef1d protein_coding protein_coding MGP_LPJ_T0041123.1 MGP_LPJ_G0021865.1 mouse_genomes_project 15 76024796 76026045 - Eef1d protein_coding retained_intron MGP_LPJ_T0041124.1 MGP_LPJ_G0021865.1 mouse_genomes_project 15 76025108 76038632 - MGP_LPJ_P0041124 Eef1d protein_coding protein_coding MGP_LPJ_T0041125.1 MGP_LPJ_G0021865.1 mouse_genomes_project 15 76025578 76038859 - MGP_LPJ_P0041125 Eef1d protein_coding protein_coding MGP_LPJ_T0041126.1 MGP_LPJ_G0021865.1 mouse_genomes_project 15 76025585 76038622 - MGP_LPJ_P0041126 Eef1d protein_coding protein_coding MGP_LPJ_T0041127.1 MGP_LPJ_G0021865.1 mouse_genomes_project 15 76025698 76038850 - MGP_LPJ_P0041127 Eef1d protein_coding protein_coding MGP_LPJ_T0041128.1 MGP_LPJ_G0021865.1 mouse_genomes_project 15 76025980 76030560 - Eef1d protein_coding retained_intron MGP_LPJ_T0041129.1 MGP_LPJ_G0021865.1 mouse_genomes_project 15 76027410 76038622 - Eef1d protein_coding retained_intron MGP_LPJ_T0041130.1 MGP_LPJ_G0021865.1 mouse_genomes_project 15 76032427 76038850 - MGP_LPJ_P0041130 Eef1d protein_coding protein_coding MGP_LPJ_T0041131.1 MGP_LPJ_G0021865.1 mouse_genomes_project 15 76032566 76034668 - MGP_LPJ_P0041131 Eef1d protein_coding protein_coding MGP_LPJ_T0041132.1 MGP_LPJ_G0021865.1 mouse_genomes_project 15 76032810 76038594 - MGP_LPJ_P0041132 Eef1d protein_coding protein_coding MGP_LPJ_T0040764.1 MGP_LPJ_G0021744.1 mouse_genomes_project 15 50801448 50807064 + MGP_LPJ_P0040764 Aard protein_coding protein_coding MGP_LPJ_T0010045.1 MGP_LPJ_G0008163.1 mouse_genomes_project 15 23823445 23823506 + Mir7212 miRNA miRNA MGP_LPJ_T0000977.1 MGP_LPJ_G0000905.1 mouse_genomes_project 15 98422669 98423134 + TEC TEC MGP_LPJ_T0041388.1 MGP_LPJ_G0021933.1 mouse_genomes_project 15 78248388 78249042 - Txn2 protein_coding processed_transcript MGP_LPJ_T0041389.1 MGP_LPJ_G0021933.1 mouse_genomes_project 15 78248388 78262604 - MGP_LPJ_P0041389 Txn2 protein_coding protein_coding MGP_LPJ_T0041390.1 MGP_LPJ_G0021933.1 mouse_genomes_project 15 78248388 78261442 - MGP_LPJ_P0041390 Txn2 protein_coding protein_coding MGP_LPJ_T0041391.1 MGP_LPJ_G0021933.1 mouse_genomes_project 15 78248545 78261325 - MGP_LPJ_P0041391 Txn2 protein_coding protein_coding MGP_LPJ_T0041392.1 MGP_LPJ_G0021933.1 mouse_genomes_project 15 78248551 78262566 - MGP_LPJ_P0041392 Txn2 protein_coding protein_coding MGP_LPJ_T0041393.1 MGP_LPJ_G0021933.1 mouse_genomes_project 15 78252848 78261332 - MGP_LPJ_P0041393 Txn2 protein_coding protein_coding MGP_LPJ_T0041394.1 MGP_LPJ_G0021933.1 mouse_genomes_project 15 78256524 78262572 - MGP_LPJ_P0041394 Txn2 protein_coding protein_coding MGP_LPJ_T0041395.1 MGP_LPJ_G0021933.1 mouse_genomes_project 15 78259994 78262595 - MGP_LPJ_P0041395 Txn2 protein_coding protein_coding MGP_LPJ_T0099147.1 MGP_LPJ_G0037410.1 mouse_genomes_project 15 101832580 101832687 - Gm25897 snRNA snRNA MGP_LPJ_T0003635.1 MGP_LPJ_G0003295.1 mouse_genomes_project 15 90836910 90846893 + C230037L18Rik antisense antisense MGP_LPJ_T0003636.1 MGP_LPJ_G0003295.1 mouse_genomes_project 15 90836926 90839959 + C230037L18Rik antisense antisense MGP_LPJ_T0003637.1 MGP_LPJ_G0003295.1 mouse_genomes_project 15 90839784 90846828 + C230037L18Rik antisense antisense MGP_LPJ_T0013052.1 MGP_LPJ_G0011143.1 mouse_genomes_project 15 10663341 10663992 + processed_pseudogene processed_pseudogene MGP_LPJ_T0042117.1 MGP_LPJ_G0022149.1 mouse_genomes_project 15 93127342 93281936 + MGP_LPJ_P0042117 Lrrk2 protein_coding protein_coding MGP_LPJ_T0042118.1 MGP_LPJ_G0022149.1 mouse_genomes_project 15 93127448 93278714 + MGP_LPJ_P0042118 Lrrk2 protein_coding unknown_likely_coding MGP_LPJ_T0042119.1 MGP_LPJ_G0022149.1 mouse_genomes_project 15 93197966 93250744 + Lrrk2 protein_coding processed_transcript MGP_LPJ_T0042120.1 MGP_LPJ_G0022149.1 mouse_genomes_project 15 93233866 93240012 + Lrrk2 protein_coding processed_transcript MGP_LPJ_T0042121.1 MGP_LPJ_G0022149.1 mouse_genomes_project 15 93241898 93281842 + Lrrk2 protein_coding processed_transcript MGP_LPJ_T0042122.1 MGP_LPJ_G0022149.1 mouse_genomes_project 15 93271446 93281842 + Lrrk2 protein_coding retained_intron MGP_LPJ_T0040588.1 MGP_LPJ_G0021680.1 mouse_genomes_project 15 32416044 32471105 + MGP_LPJ_P0040588 Laptm4b protein_coding protein_coding MGP_LPJ_T0006778.1 MGP_LPJ_G0005602.1 mouse_genomes_project 15 44755907 44809204 + 1700022A22Rik lincRNA lincRNA MGP_LPJ_T0006779.1 MGP_LPJ_G0005602.1 mouse_genomes_project 15 44755919 44792850 + 1700022A22Rik lincRNA lincRNA MGP_LPJ_T0006780.1 MGP_LPJ_G0005602.1 mouse_genomes_project 15 44755933 44809253 + 1700022A22Rik lincRNA lincRNA MGP_LPJ_T0040560.1 MGP_LPJ_G0021670.1 mouse_genomes_project 15 29573338 29643185 - MGP_LPJ_P0040560 March6 protein_coding protein_coding MGP_LPJ_T0041901.1 MGP_LPJ_G0022085.1 mouse_genomes_project 15 85911045 85953849 - MGP_LPJ_P0041901 5031439G07Rik protein_coding protein_coding MGP_LPJ_T0041902.1 MGP_LPJ_G0022085.1 mouse_genomes_project 15 85915095 85928078 - 5031439G07Rik protein_coding retained_intron MGP_LPJ_T0041903.1 MGP_LPJ_G0022085.1 mouse_genomes_project 15 85922781 85954602 - 5031439G07Rik protein_coding processed_transcript MGP_LPJ_T0099118.1 MGP_LPJ_G0037381.1 mouse_genomes_project 15 54141494 54141556 - Gm26296 snRNA snRNA MGP_LPJ_T0040750.1 MGP_LPJ_G0021740.1 mouse_genomes_project 15 49285100 49561463 - MGP_LPJ_P0040750 Trps1 protein_coding protein_coding MGP_LPJ_T0040751.1 MGP_LPJ_G0021740.1 mouse_genomes_project 15 49288760 49561485 - MGP_LPJ_P0040751 Trps1 protein_coding protein_coding MGP_LPJ_T0040752.1 MGP_LPJ_G0021740.1 mouse_genomes_project 15 49288778 49559662 - MGP_LPJ_P0040752 Trps1 protein_coding protein_coding MGP_LPJ_T0040753.1 MGP_LPJ_G0021740.1 mouse_genomes_project 15 49290782 49559659 - MGP_LPJ_P0040753 Trps1 protein_coding protein_coding MGP_LPJ_T0040754.1 MGP_LPJ_G0021740.1 mouse_genomes_project 15 49290783 49553416 - MGP_LPJ_P0040754 Trps1 protein_coding protein_coding MGP_LPJ_T0040755.1 MGP_LPJ_G0021740.1 mouse_genomes_project 15 49290799 49561961 - MGP_LPJ_P0040755 Trps1 protein_coding protein_coding MGP_LPJ_T0040756.1 MGP_LPJ_G0021740.1 mouse_genomes_project 15 49488561 49496593 - MGP_LPJ_P0040756 Trps1 protein_coding protein_coding MGP_LPJ_T0040757.1 MGP_LPJ_G0021740.1 mouse_genomes_project 15 49516861 49562383 - MGP_LPJ_P0040757 Trps1 protein_coding protein_coding MGP_LPJ_T0101902.1 MGP_LPJ_G0039939.1 mouse_genomes_project 15 100340752 100346066 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013097.1 MGP_LPJ_G0011188.1 mouse_genomes_project 15 92970188 92971628 - processed_pseudogene processed_pseudogene MGP_LPJ_T0042175.1 MGP_LPJ_G0022166.1 mouse_genomes_project 15 97448890 97645173 + MGP_LPJ_P0042175 Ano6 protein_coding protein_coding MGP_LPJ_T0042176.1 MGP_LPJ_G0022166.1 mouse_genomes_project 15 97449031 97645186 + MGP_LPJ_P0042176 Ano6 protein_coding unknown_likely_coding MGP_LPJ_T0042040.1 MGP_LPJ_G0022128.1 mouse_genomes_project 15 90704573 90721674 + MGP_LPJ_P0042040 Ncaph2 protein_coding protein_coding MGP_LPJ_T0042041.1 MGP_LPJ_G0022128.1 mouse_genomes_project 15 90704590 90721674 + MGP_LPJ_P0042041 Ncaph2 protein_coding protein_coding MGP_LPJ_T0042042.1 MGP_LPJ_G0022128.1 mouse_genomes_project 15 90704590 90721674 + MGP_LPJ_P0042042 Ncaph2 protein_coding protein_coding MGP_LPJ_T0042043.1 MGP_LPJ_G0022128.1 mouse_genomes_project 15 90704617 90721674 + MGP_LPJ_P0042043 Ncaph2 protein_coding nonsense_mediated_decay MGP_LPJ_T0042044.1 MGP_LPJ_G0022128.1 mouse_genomes_project 15 90704659 90712728 + Ncaph2 protein_coding retained_intron MGP_LPJ_T0042045.1 MGP_LPJ_G0022128.1 mouse_genomes_project 15 90704675 90712752 + Ncaph2 protein_coding retained_intron MGP_LPJ_T0042046.1 MGP_LPJ_G0022128.1 mouse_genomes_project 15 90704768 90714179 + Ncaph2 protein_coding retained_intron MGP_LPJ_T0042047.1 MGP_LPJ_G0022128.1 mouse_genomes_project 15 90718539 90719523 + Ncaph2 protein_coding retained_intron MGP_LPJ_T0042048.1 MGP_LPJ_G0022128.1 mouse_genomes_project 15 90718725 90720088 + Ncaph2 protein_coding retained_intron MGP_LPJ_T0042049.1 MGP_LPJ_G0022128.1 mouse_genomes_project 15 90718880 90720037 + Ncaph2 protein_coding retained_intron MGP_LPJ_T0042050.1 MGP_LPJ_G0022128.1 mouse_genomes_project 15 90719145 90719780 + Ncaph2 protein_coding retained_intron MGP_LPJ_T0042051.1 MGP_LPJ_G0022128.1 mouse_genomes_project 15 90719494 90720372 + Ncaph2 protein_coding retained_intron MGP_LPJ_T0042052.1 MGP_LPJ_G0022128.1 mouse_genomes_project 15 90719600 90720411 + Ncaph2 protein_coding retained_intron MGP_LPJ_T0041912.1 MGP_LPJ_G0022091.1 mouse_genomes_project 15 86367748 86498731 + MGP_LPJ_P0041912 Atxn10 protein_coding protein_coding MGP_LPJ_T0010117.1 MGP_LPJ_G0008235.1 mouse_genomes_project 15 105685765 105685862 + Mir148b miRNA miRNA MGP_LPJ_T0010042.1 MGP_LPJ_G0008160.1 mouse_genomes_project 15 10028009 10028149 + miRNA miRNA MGP_LPJ_T0099121.1 MGP_LPJ_G0037384.1 mouse_genomes_project 15 59215442 59215549 + Gm25875 snRNA snRNA MGP_LPJ_T0041282.1 MGP_LPJ_G0021901.1 mouse_genomes_project 15 76749612 76772241 + MGP_LPJ_P0041282 Adck5 protein_coding nonsense_mediated_decay MGP_LPJ_T0041283.1 MGP_LPJ_G0021901.1 mouse_genomes_project 15 76749632 76772249 + Adck5 protein_coding retained_intron MGP_LPJ_T0041284.1 MGP_LPJ_G0021901.1 mouse_genomes_project 15 76749658 76768256 + Adck5 protein_coding processed_transcript MGP_LPJ_T0041285.1 MGP_LPJ_G0021901.1 mouse_genomes_project 15 76749665 76772242 + Adck5 protein_coding retained_intron MGP_LPJ_T0041286.1 MGP_LPJ_G0021901.1 mouse_genomes_project 15 76749666 76766158 + Adck5 protein_coding processed_transcript MGP_LPJ_T0041287.1 MGP_LPJ_G0021901.1 mouse_genomes_project 15 76749727 76772083 + MGP_LPJ_P0041287 Adck5 protein_coding nonsense_mediated_decay MGP_LPJ_T0041288.1 MGP_LPJ_G0021901.1 mouse_genomes_project 15 76749736 76772232 + MGP_LPJ_P0041288 Adck5 protein_coding protein_coding MGP_LPJ_T0041289.1 MGP_LPJ_G0021901.1 mouse_genomes_project 15 76769870 76770603 + Adck5 protein_coding retained_intron MGP_LPJ_T0041290.1 MGP_LPJ_G0021901.1 mouse_genomes_project 15 76770333 76771589 + Adck5 protein_coding retained_intron MGP_LPJ_T0041291.1 MGP_LPJ_G0021901.1 mouse_genomes_project 15 76770600 76771621 + Adck5 protein_coding retained_intron MGP_LPJ_T0041292.1 MGP_LPJ_G0021901.1 mouse_genomes_project 15 76770725 76772249 + Adck5 protein_coding retained_intron MGP_LPJ_T0041293.1 MGP_LPJ_G0021901.1 mouse_genomes_project 15 76771254 76771596 + Adck5 protein_coding retained_intron MGP_LPJ_T0041294.1 MGP_LPJ_G0021901.1 mouse_genomes_project 15 76771396 76772149 + Adck5 protein_coding retained_intron MGP_LPJ_T0041866.1 MGP_LPJ_G0022072.1 mouse_genomes_project 15 84993620 85023706 - MGP_LPJ_P0041866 Sult4a1 protein_coding protein_coding MGP_LPJ_T0042622.1 MGP_LPJ_G0022320.1 mouse_genomes_project 15 104857741 104866890 + MGP_LPJ_P0042622 Tarbp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0042623.1 MGP_LPJ_G0022320.1 mouse_genomes_project 15 104857795 104860530 + Tarbp2 protein_coding retained_intron MGP_LPJ_T0042624.1 MGP_LPJ_G0022320.1 mouse_genomes_project 15 104857906 104866818 + MGP_LPJ_P0042624 Tarbp2 protein_coding protein_coding MGP_LPJ_T0042625.1 MGP_LPJ_G0022320.1 mouse_genomes_project 15 104857976 104866892 + Tarbp2 protein_coding retained_intron MGP_LPJ_T0042626.1 MGP_LPJ_G0022320.1 mouse_genomes_project 15 104858004 104861299 + MGP_LPJ_P0042626 Tarbp2 protein_coding protein_coding MGP_LPJ_T0042627.1 MGP_LPJ_G0022320.1 mouse_genomes_project 15 104858008 104866892 + MGP_LPJ_P0042627 Tarbp2 protein_coding protein_coding MGP_LPJ_T0042628.1 MGP_LPJ_G0022320.1 mouse_genomes_project 15 104858047 104859270 + Tarbp2 protein_coding retained_intron MGP_LPJ_T0042629.1 MGP_LPJ_G0022320.1 mouse_genomes_project 15 104858096 104866820 + MGP_LPJ_P0042629 Tarbp2 protein_coding protein_coding MGP_LPJ_T0042630.1 MGP_LPJ_G0022320.1 mouse_genomes_project 15 104858106 104866435 + Tarbp2 protein_coding processed_transcript MGP_LPJ_T0042631.1 MGP_LPJ_G0022320.1 mouse_genomes_project 15 104858117 104863967 + Tarbp2 protein_coding retained_intron MGP_LPJ_T0042632.1 MGP_LPJ_G0022320.1 mouse_genomes_project 15 104858275 104864179 + MGP_LPJ_P0042632 Tarbp2 protein_coding protein_coding MGP_LPJ_T0042633.1 MGP_LPJ_G0022320.1 mouse_genomes_project 15 104858348 104861630 + MGP_LPJ_P0042633 Tarbp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0042634.1 MGP_LPJ_G0022320.1 mouse_genomes_project 15 104858351 104864530 + MGP_LPJ_P0042634 Tarbp2 protein_coding protein_coding MGP_LPJ_T0042635.1 MGP_LPJ_G0022320.1 mouse_genomes_project 15 104860589 104864068 + Tarbp2 protein_coding retained_intron MGP_LPJ_T0099127.1 MGP_LPJ_G0037390.1 mouse_genomes_project 15 72451665 72451732 - Gm28020 snRNA snRNA MGP_LPJ_T0041967.1 MGP_LPJ_G0022110.1 mouse_genomes_project 15 90185851 90189384 + MGP_LPJ_P0041967 Pim3 protein_coding protein_coding MGP_LPJ_T0040296.1 MGP_LPJ_G0021586.1 mouse_genomes_project 15 811004 827032 - MGP_LPJ_P0040296 Fbxo4 protein_coding protein_coding MGP_LPJ_T0040297.1 MGP_LPJ_G0021586.1 mouse_genomes_project 15 817374 818073 - Fbxo4 protein_coding retained_intron MGP_LPJ_T0013090.1 MGP_LPJ_G0011181.1 mouse_genomes_project 15 82278251 82278875 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003644.1 MGP_LPJ_G0003302.1 mouse_genomes_project 15 101736728 101745849 - Gm16537 antisense antisense MGP_LPJ_T0041782.1 MGP_LPJ_G0022045.1 mouse_genomes_project 15 83034688 83044425 - MGP_LPJ_P0041782 Cyp2d22 protein_coding unknown_likely_coding MGP_LPJ_T0042511.1 MGP_LPJ_G0022269.1 mouse_genomes_project 15 103376146 103400586 + MGP_LPJ_P0042511 Acvr1b protein_coding protein_coding MGP_LPJ_T0042281.1 MGP_LPJ_G0022201.1 mouse_genomes_project 15 100425746 100431144 - protein_coding processed_transcript MGP_LPJ_T0042282.1 MGP_LPJ_G0022201.1 mouse_genomes_project 15 100425921 100459341 - MGP_LPJ_P0042282 protein_coding unknown_likely_coding MGP_LPJ_T0042283.1 MGP_LPJ_G0022201.1 mouse_genomes_project 15 100431334 100459341 - MGP_LPJ_P0042283 protein_coding nonsense_mediated_decay MGP_LPJ_T0042284.1 MGP_LPJ_G0022201.1 mouse_genomes_project 15 100432262 100443956 - protein_coding retained_intron MGP_LPJ_T0042285.1 MGP_LPJ_G0022201.1 mouse_genomes_project 15 100432463 100435149 - protein_coding retained_intron MGP_LPJ_T0042286.1 MGP_LPJ_G0022201.1 mouse_genomes_project 15 100432690 100456805 - protein_coding retained_intron MGP_LPJ_T0042287.1 MGP_LPJ_G0022201.1 mouse_genomes_project 15 100436799 100459250 - protein_coding retained_intron MGP_LPJ_T0042288.1 MGP_LPJ_G0022201.1 mouse_genomes_project 15 100447873 100459385 - protein_coding retained_intron MGP_LPJ_T0041905.1 MGP_LPJ_G0022087.1 mouse_genomes_project 15 86021002 86049176 + MGP_LPJ_P0041905 Fam118a protein_coding protein_coding MGP_LPJ_T0041906.1 MGP_LPJ_G0022087.1 mouse_genomes_project 15 86021130 86049186 + MGP_LPJ_P0041906 Fam118a protein_coding unknown_likely_coding MGP_LPJ_T0013084.1 MGP_LPJ_G0011175.1 mouse_genomes_project 15 76298121 76298361 + processed_pseudogene processed_pseudogene MGP_LPJ_T0042111.1 MGP_LPJ_G0022147.1 mouse_genomes_project 15 92617155 92686373 + MGP_LPJ_P0042111 CN725425 protein_coding protein_coding MGP_LPJ_T0042112.1 MGP_LPJ_G0022147.1 mouse_genomes_project 15 92617237 92686373 + MGP_LPJ_P0042112 CN725425 protein_coding unknown_likely_coding MGP_LPJ_T0042113.1 MGP_LPJ_G0022147.1 mouse_genomes_project 15 92653803 92686364 + MGP_LPJ_P0042113 CN725425 protein_coding protein_coding MGP_LPJ_T0040813.1 MGP_LPJ_G0021763.1 mouse_genomes_project 15 55600443 55633500 - MGP_LPJ_P0040813 Has2 protein_coding protein_coding MGP_LPJ_T0041221.1 MGP_LPJ_G0021887.1 mouse_genomes_project 15 76505011 76507423 + MGP_LPJ_P0041221 Cyc1 protein_coding protein_coding MGP_LPJ_T0042060.1 MGP_LPJ_G0022134.1 mouse_genomes_project 15 90769157 90783070 - Chkb protein_coding retained_intron MGP_LPJ_T0042064.1 MGP_LPJ_G0022134.1 mouse_genomes_project 15 90779733 90783234 - Chkb protein_coding retained_intron MGP_LPJ_T0042065.1 MGP_LPJ_G0022134.1 mouse_genomes_project 15 90779733 90780535 - Chkb protein_coding processed_transcript MGP_LPJ_T0042066.1 MGP_LPJ_G0022134.1 mouse_genomes_project 15 90779740 90782813 - Chkb protein_coding retained_intron MGP_LPJ_T0042067.1 MGP_LPJ_G0022134.1 mouse_genomes_project 15 90779740 90783273 - MGP_LPJ_P0042067 Chkb protein_coding protein_coding MGP_LPJ_T0042068.1 MGP_LPJ_G0022134.1 mouse_genomes_project 15 90779814 90781867 - MGP_LPJ_P0042068 Chkb protein_coding nonsense_mediated_decay MGP_LPJ_T0042069.1 MGP_LPJ_G0022134.1 mouse_genomes_project 15 90779841 90780533 - Chkb protein_coding retained_intron MGP_LPJ_T0042070.1 MGP_LPJ_G0022134.1 mouse_genomes_project 15 90780488 90783282 - Chkb protein_coding retained_intron MGP_LPJ_T0042071.1 MGP_LPJ_G0022134.1 mouse_genomes_project 15 90780753 90782804 - Chkb protein_coding retained_intron MGP_LPJ_T0042072.1 MGP_LPJ_G0022134.1 mouse_genomes_project 15 90781008 90782467 - MGP_LPJ_P0042072 Chkb protein_coding protein_coding MGP_LPJ_T0040979.1 MGP_LPJ_G0021819.1 mouse_genomes_project 15 72315695 72799270 - MGP_LPJ_P0040979 Trappc9 protein_coding protein_coding MGP_LPJ_T0040980.1 MGP_LPJ_G0021819.1 mouse_genomes_project 15 72315695 72793844 - MGP_LPJ_P0040980 Trappc9 protein_coding protein_coding MGP_LPJ_T0040981.1 MGP_LPJ_G0021819.1 mouse_genomes_project 15 72529445 72799270 - MGP_LPJ_P0040981 Trappc9 protein_coding protein_coding MGP_LPJ_T0040982.1 MGP_LPJ_G0021819.1 mouse_genomes_project 15 72582448 72799270 - MGP_LPJ_P0040982 Trappc9 protein_coding protein_coding MGP_LPJ_T0042691.1 MGP_LPJ_G0022339.1 mouse_genomes_project 15 105674201 105700451 + MGP_LPJ_P0042691 Copz1 protein_coding protein_coding MGP_LPJ_T0040429.1 MGP_LPJ_G0021623.1 mouse_genomes_project 15 7355099 7403328 + MGP_LPJ_P0040429 protein_coding nonsense_mediated_decay MGP_LPJ_T0099098.1 MGP_LPJ_G0037361.1 mouse_genomes_project 15 1867586 1867689 + Gm25652 snRNA snRNA MGP_LPJ_T0099132.1 MGP_LPJ_G0037395.1 mouse_genomes_project 15 77451991 77452137 - Gm24056 snRNA snRNA MGP_LPJ_T0042322.1 MGP_LPJ_G0022217.1 mouse_genomes_project 15 100820520 100836416 - MGP_LPJ_P0042322 Lmbr1l protein_coding protein_coding MGP_LPJ_T0042323.1 MGP_LPJ_G0022217.1 mouse_genomes_project 15 100822770 100825489 - Lmbr1l protein_coding processed_transcript MGP_LPJ_T0042324.1 MGP_LPJ_G0022217.1 mouse_genomes_project 15 100823727 100825815 - Lmbr1l protein_coding retained_intron MGP_LPJ_T0042325.1 MGP_LPJ_G0022217.1 mouse_genomes_project 15 100824431 100826012 - Lmbr1l protein_coding retained_intron MGP_LPJ_T0042326.1 MGP_LPJ_G0022217.1 mouse_genomes_project 15 100830053 100836550 - Lmbr1l protein_coding processed_transcript MGP_LPJ_T0042327.1 MGP_LPJ_G0022217.1 mouse_genomes_project 15 100831727 100836245 - Lmbr1l protein_coding processed_transcript MGP_LPJ_T0041061.1 MGP_LPJ_G0021847.1 mouse_genomes_project 15 74856561 74861416 + MGP_LPJ_P0041061 Ly6e protein_coding protein_coding MGP_LPJ_T0041062.1 MGP_LPJ_G0021847.1 mouse_genomes_project 15 74856561 74861414 + MGP_LPJ_P0041062 Ly6e protein_coding protein_coding MGP_LPJ_T0041063.1 MGP_LPJ_G0021847.1 mouse_genomes_project 15 74856581 74861416 + MGP_LPJ_P0041063 Ly6e protein_coding protein_coding MGP_LPJ_T0041064.1 MGP_LPJ_G0021847.1 mouse_genomes_project 15 74856616 74860287 + MGP_LPJ_P0041064 Ly6e protein_coding protein_coding MGP_LPJ_T0041065.1 MGP_LPJ_G0021847.1 mouse_genomes_project 15 74856652 74859900 + MGP_LPJ_P0041065 Ly6e protein_coding protein_coding MGP_LPJ_T0041066.1 MGP_LPJ_G0021847.1 mouse_genomes_project 15 74856674 74860267 + MGP_LPJ_P0041066 Ly6e protein_coding protein_coding MGP_LPJ_T0041067.1 MGP_LPJ_G0021847.1 mouse_genomes_project 15 74856688 74860166 + MGP_LPJ_P0041067 Ly6e protein_coding protein_coding MGP_LPJ_T0041068.1 MGP_LPJ_G0021847.1 mouse_genomes_project 15 74856696 74860238 + MGP_LPJ_P0041068 Ly6e protein_coding protein_coding MGP_LPJ_T0041069.1 MGP_LPJ_G0021847.1 mouse_genomes_project 15 74856751 74860104 + MGP_LPJ_P0041069 Ly6e protein_coding protein_coding MGP_LPJ_T0041070.1 MGP_LPJ_G0021847.1 mouse_genomes_project 15 74856770 74860171 + MGP_LPJ_P0041070 Ly6e protein_coding protein_coding MGP_LPJ_T0041071.1 MGP_LPJ_G0021847.1 mouse_genomes_project 15 74857163 74860842 + MGP_LPJ_P0041071 Ly6e protein_coding protein_coding MGP_LPJ_T0041072.1 MGP_LPJ_G0021847.1 mouse_genomes_project 15 74857176 74860540 + Ly6e protein_coding retained_intron MGP_LPJ_T0041073.1 MGP_LPJ_G0021847.1 mouse_genomes_project 15 74857178 74860842 + Ly6e protein_coding retained_intron MGP_LPJ_T0041074.1 MGP_LPJ_G0021847.1 mouse_genomes_project 15 74857182 74860121 + MGP_LPJ_P0041074 Ly6e protein_coding protein_coding MGP_LPJ_T0041075.1 MGP_LPJ_G0021847.1 mouse_genomes_project 15 74857193 74858008 + Ly6e protein_coding retained_intron MGP_LPJ_T0041076.1 MGP_LPJ_G0021847.1 mouse_genomes_project 15 74858065 74860337 + MGP_LPJ_P0041076 Ly6e protein_coding protein_coding MGP_LPJ_T0098498.1 MGP_LPJ_G0036775.1 mouse_genomes_project 15 35551693 35552454 + Gm16137 sense_intronic sense_intronic MGP_LPJ_T0041612.1 MGP_LPJ_G0021995.1 mouse_genomes_project 15 80677656 80720518 + MGP_LPJ_P0041612 Mgat3 protein_coding protein_coding MGP_LPJ_T0041922.1 MGP_LPJ_G0022095.1 mouse_genomes_project 15 86881429 86886189 - MGP_LPJ_P0041922 Cdpf1 protein_coding protein_coding MGP_LPJ_T0041923.1 MGP_LPJ_G0022095.1 mouse_genomes_project 15 86881657 86886147 - MGP_LPJ_P0041923 Cdpf1 protein_coding protein_coding MGP_LPJ_T0041924.1 MGP_LPJ_G0022095.1 mouse_genomes_project 15 86881701 86886137 - MGP_LPJ_P0041924 Cdpf1 protein_coding protein_coding MGP_LPJ_T0041925.1 MGP_LPJ_G0022095.1 mouse_genomes_project 15 86881704 86885583 - MGP_LPJ_P0041925 Cdpf1 protein_coding protein_coding MGP_LPJ_T0041926.1 MGP_LPJ_G0022095.1 mouse_genomes_project 15 86881714 86886190 - MGP_LPJ_P0041926 Cdpf1 protein_coding protein_coding MGP_LPJ_T0041927.1 MGP_LPJ_G0022095.1 mouse_genomes_project 15 86882701 86886152 - MGP_LPJ_P0041927 Cdpf1 protein_coding protein_coding MGP_LPJ_T0041760.1 MGP_LPJ_G0022033.1 mouse_genomes_project 15 82765096 82779354 + MGP_LPJ_P0041760 Ccdc134 protein_coding protein_coding MGP_LPJ_T0003603.1 MGP_LPJ_G0003270.1 mouse_genomes_project 15 2017474 2027996 - Gm15938 antisense antisense MGP_LPJ_T0041786.1 MGP_LPJ_G0022049.1 mouse_genomes_project 15 83308908 83313220 + MGP_LPJ_P0041786 Cyp2d12 protein_coding protein_coding MGP_LPJ_T0041564.1 MGP_LPJ_G0021985.1 mouse_genomes_project 15 80247090 80259952 - MGP_LPJ_P0041564 Dnal4 protein_coding protein_coding MGP_LPJ_T0041565.1 MGP_LPJ_G0021985.1 mouse_genomes_project 15 80247093 80260036 - MGP_LPJ_P0041565 Dnal4 protein_coding protein_coding MGP_LPJ_T0041566.1 MGP_LPJ_G0021985.1 mouse_genomes_project 15 80250623 80262541 - Dnal4 protein_coding processed_transcript MGP_LPJ_T0041567.1 MGP_LPJ_G0021985.1 mouse_genomes_project 15 80260140 80263418 - Dnal4 protein_coding processed_transcript MGP_LPJ_T0041376.1 MGP_LPJ_G0021928.1 mouse_genomes_project 15 77872156 77878355 + MGP_LPJ_P0041376 protein_coding protein_coding MGP_LPJ_T0041200.1 MGP_LPJ_G0021884.1 mouse_genomes_project 15 76455799 76466304 - MGP_LPJ_P0041200 Oplah protein_coding protein_coding MGP_LPJ_T0041201.1 MGP_LPJ_G0021884.1 mouse_genomes_project 15 76455805 76456695 - Oplah protein_coding retained_intron MGP_LPJ_T0041202.1 MGP_LPJ_G0021884.1 mouse_genomes_project 15 76455805 76466448 - MGP_LPJ_P0041202 Oplah protein_coding protein_coding MGP_LPJ_T0041203.1 MGP_LPJ_G0021884.1 mouse_genomes_project 15 76456545 76457243 - Oplah protein_coding retained_intron MGP_LPJ_T0041204.1 MGP_LPJ_G0021884.1 mouse_genomes_project 15 76459789 76460318 - Oplah protein_coding retained_intron MGP_LPJ_T0041205.1 MGP_LPJ_G0021884.1 mouse_genomes_project 15 76460078 76461565 - Oplah protein_coding retained_intron MGP_LPJ_T0041206.1 MGP_LPJ_G0021884.1 mouse_genomes_project 15 76460156 76466592 - MGP_LPJ_P0041206 Oplah protein_coding protein_coding MGP_LPJ_T0041207.1 MGP_LPJ_G0021884.1 mouse_genomes_project 15 76461266 76462403 - Oplah protein_coding processed_transcript MGP_LPJ_T0041208.1 MGP_LPJ_G0021884.1 mouse_genomes_project 15 76465689 76487665 - MGP_LPJ_P0041208 Oplah protein_coding protein_coding MGP_LPJ_T0040312.1 MGP_LPJ_G0021591.1 mouse_genomes_project 15 1680541 1683959 + MGP_LPJ_P0040312 H2-M10.4 protein_coding protein_coding MGP_LPJ_T0010078.1 MGP_LPJ_G0008196.1 mouse_genomes_project 15 81185590 81185654 + Mir6957 miRNA miRNA MGP_LPJ_T0041037.1 MGP_LPJ_G0021835.1 mouse_genomes_project 15 74566077 74569794 - MGP_LPJ_P0041037 Slurp1 protein_coding protein_coding MGP_LPJ_T0041038.1 MGP_LPJ_G0021835.1 mouse_genomes_project 15 74568423 74569774 - MGP_LPJ_P0041038 Slurp1 protein_coding protein_coding MGP_LPJ_T0042443.1 MGP_LPJ_G0022255.1 mouse_genomes_project 15 102603765 102614013 + MGP_LPJ_P0042443 Letmd1 protein_coding protein_coding MGP_LPJ_T0041784.1 MGP_LPJ_G0022047.1 mouse_genomes_project 15 83077794 83085053 - MGP_LPJ_P0041784 Cyp2d10 protein_coding protein_coding MGP_LPJ_T0041415.1 MGP_LPJ_G0021942.1 mouse_genomes_project 15 78806418 78813536 + MGP_LPJ_P0041415 Mpst protein_coding protein_coding MGP_LPJ_T0041416.1 MGP_LPJ_G0021942.1 mouse_genomes_project 15 78806507 78813536 + MGP_LPJ_P0041416 Mpst protein_coding protein_coding MGP_LPJ_T0041417.1 MGP_LPJ_G0021942.1 mouse_genomes_project 15 78806797 78813536 + MGP_LPJ_P0041417 Mpst protein_coding protein_coding MGP_LPJ_T0042058.1 MGP_LPJ_G0022133.1 mouse_genomes_project 15 90739464 90761158 - MGP_LPJ_P0042058 Syce3 protein_coding protein_coding MGP_LPJ_T0042059.1 MGP_LPJ_G0022133.1 mouse_genomes_project 15 90739464 90761398 - MGP_LPJ_P0042059 Syce3 protein_coding protein_coding MGP_LPJ_T0099146.1 MGP_LPJ_G0037409.1 mouse_genomes_project 15 101348854 101348961 - Gm22951 snRNA snRNA MGP_LPJ_T0042193.1 MGP_LPJ_G0022176.1 mouse_genomes_project 15 99449459 99483384 - MGP_LPJ_P0042193 Rpap3 protein_coding protein_coding MGP_LPJ_T0041094.1 MGP_LPJ_G0021856.1 mouse_genomes_project 15 75712084 75713670 + MGP_LPJ_P0041094 Gpihbp1 protein_coding protein_coding MGP_LPJ_T0041095.1 MGP_LPJ_G0021856.1 mouse_genomes_project 15 75712086 75713670 + MGP_LPJ_P0041095 Gpihbp1 protein_coding protein_coding MGP_LPJ_T0041096.1 MGP_LPJ_G0021856.1 mouse_genomes_project 15 75712110 75714938 + MGP_LPJ_P0041096 Gpihbp1 protein_coding protein_coding MGP_LPJ_T0041097.1 MGP_LPJ_G0021856.1 mouse_genomes_project 15 75712124 75713401 + Gpihbp1 protein_coding retained_intron MGP_LPJ_T0041098.1 MGP_LPJ_G0021856.1 mouse_genomes_project 15 75712124 75713645 + Gpihbp1 protein_coding retained_intron MGP_LPJ_T0010068.1 MGP_LPJ_G0008186.1 mouse_genomes_project 15 76602781 76602841 + Mir6954 miRNA miRNA MGP_LPJ_T0042011.1 MGP_LPJ_G0022121.1 mouse_genomes_project 15 90488622 90513789 - MGP_LPJ_P0042011 Plxnb2 protein_coding unknown_likely_coding MGP_LPJ_T0042012.1 MGP_LPJ_G0022121.1 mouse_genomes_project 15 90488626 90489657 - Plxnb2 protein_coding processed_transcript MGP_LPJ_T0042013.1 MGP_LPJ_G0022121.1 mouse_genomes_project 15 90489058 90490322 - Plxnb2 protein_coding processed_transcript MGP_LPJ_T0042014.1 MGP_LPJ_G0022121.1 mouse_genomes_project 15 90494079 90494616 - Plxnb2 protein_coding processed_transcript MGP_LPJ_T0042015.1 MGP_LPJ_G0022121.1 mouse_genomes_project 15 90497959 90498866 - Plxnb2 protein_coding processed_transcript MGP_LPJ_T0006809.1 MGP_LPJ_G0005617.1 mouse_genomes_project 15 86629867 86642486 + AU022754 lincRNA lincRNA MGP_LPJ_T0098174.1 MGP_LPJ_G0036455.1 mouse_genomes_project 15 28678220 28678339 + Gm23956 rRNA rRNA MGP_LPJ_T0041142.1 MGP_LPJ_G0021871.1 mouse_genomes_project 15 76111297 76113881 - MGP_LPJ_P0041142 Ccdc166 protein_coding protein_coding MGP_LPJ_T0041143.1 MGP_LPJ_G0021871.1 mouse_genomes_project 15 76112192 76113868 - MGP_LPJ_P0041143 Ccdc166 protein_coding protein_coding MGP_LPJ_T0042528.1 MGP_LPJ_G0022281.1 mouse_genomes_project 15 103805257 103818778 - MGP_LPJ_P0042528 Krt90 protein_coding protein_coding MGP_LPJ_T0041209.1 MGP_LPJ_G0021885.1 mouse_genomes_project 15 76487046 76492450 + MGP_LPJ_P0041209 Exosc4 protein_coding protein_coding MGP_LPJ_T0041210.1 MGP_LPJ_G0021885.1 mouse_genomes_project 15 76487240 76490867 + Exosc4 protein_coding processed_transcript MGP_LPJ_T0041972.1 MGP_LPJ_G0022112.1 mouse_genomes_project 15 90288132 90318223 - MGP_LPJ_P0041972 Mlc1 protein_coding protein_coding MGP_LPJ_T0041973.1 MGP_LPJ_G0022112.1 mouse_genomes_project 15 90288132 90318223 - MGP_LPJ_P0041973 Mlc1 protein_coding protein_coding MGP_LPJ_T0041350.1 MGP_LPJ_G0021916.1 mouse_genomes_project 15 77074463 77087326 + MGP_LPJ_P0041350 Zfp7 protein_coding protein_coding MGP_LPJ_T0040622.1 MGP_LPJ_G0021693.1 mouse_genomes_project 15 34289933 34422172 - MGP_LPJ_P0040622 Rgs22 protein_coding protein_coding MGP_LPJ_T0040623.1 MGP_LPJ_G0021693.1 mouse_genomes_project 15 34290024 34317725 - MGP_LPJ_P0040623 Rgs22 protein_coding protein_coding MGP_LPJ_T0040624.1 MGP_LPJ_G0021693.1 mouse_genomes_project 15 34290783 34382780 - MGP_LPJ_P0040624 Rgs22 protein_coding protein_coding MGP_LPJ_T0040625.1 MGP_LPJ_G0021693.1 mouse_genomes_project 15 34325974 34360702 - MGP_LPJ_P0040625 Rgs22 protein_coding protein_coding MGP_LPJ_T0040626.1 MGP_LPJ_G0021693.1 mouse_genomes_project 15 34420899 34422157 - Rgs22 protein_coding retained_intron MGP_LPJ_T0010091.1 MGP_LPJ_G0008209.1 mouse_genomes_project 15 83547946 83548006 - Gm27618 miRNA miRNA MGP_LPJ_T0041339.1 MGP_LPJ_G0021914.1 mouse_genomes_project 15 76907037 77003629 - MGP_LPJ_P0041339 Arhgap39 protein_coding protein_coding MGP_LPJ_T0041340.1 MGP_LPJ_G0021914.1 mouse_genomes_project 15 76907037 77003542 - MGP_LPJ_P0041340 Arhgap39 protein_coding protein_coding MGP_LPJ_T0041341.1 MGP_LPJ_G0021914.1 mouse_genomes_project 15 76907912 76908656 - Arhgap39 protein_coding retained_intron MGP_LPJ_T0041342.1 MGP_LPJ_G0021914.1 mouse_genomes_project 15 76916475 77003588 - Arhgap39 protein_coding retained_intron MGP_LPJ_T0041343.1 MGP_LPJ_G0021914.1 mouse_genomes_project 15 76936550 76979353 - MGP_LPJ_P0041343 Arhgap39 protein_coding protein_coding MGP_LPJ_T0041344.1 MGP_LPJ_G0021914.1 mouse_genomes_project 15 76942922 77003565 - MGP_LPJ_P0041344 Arhgap39 protein_coding protein_coding MGP_LPJ_T0041345.1 MGP_LPJ_G0021914.1 mouse_genomes_project 15 76942926 77003455 - MGP_LPJ_P0041345 Arhgap39 protein_coding protein_coding MGP_LPJ_T0041346.1 MGP_LPJ_G0021914.1 mouse_genomes_project 15 76950596 77003600 - Arhgap39 protein_coding retained_intron MGP_LPJ_T0041347.1 MGP_LPJ_G0021914.1 mouse_genomes_project 15 76951045 77003429 - MGP_LPJ_P0041347 Arhgap39 protein_coding protein_coding MGP_LPJ_T0041348.1 MGP_LPJ_G0021914.1 mouse_genomes_project 15 76951061 77003535 - MGP_LPJ_P0041348 Arhgap39 protein_coding protein_coding MGP_LPJ_T0041418.1 MGP_LPJ_G0021943.1 mouse_genomes_project 15 78829302 78839242 + MGP_LPJ_P0041418 Kctd17 protein_coding protein_coding MGP_LPJ_T0041419.1 MGP_LPJ_G0021943.1 mouse_genomes_project 15 78829302 78839242 + MGP_LPJ_P0041419 Kctd17 protein_coding protein_coding MGP_LPJ_T0041420.1 MGP_LPJ_G0021943.1 mouse_genomes_project 15 78829366 78839654 + MGP_LPJ_P0041420 Kctd17 protein_coding protein_coding MGP_LPJ_T0041421.1 MGP_LPJ_G0021943.1 mouse_genomes_project 15 78829400 78839588 + MGP_LPJ_P0041421 Kctd17 protein_coding protein_coding MGP_LPJ_T0041422.1 MGP_LPJ_G0021943.1 mouse_genomes_project 15 78829429 78836605 + Kctd17 protein_coding retained_intron MGP_LPJ_T0041423.1 MGP_LPJ_G0021943.1 mouse_genomes_project 15 78829534 78839392 + MGP_LPJ_P0041423 Kctd17 protein_coding nonsense_mediated_decay MGP_LPJ_T0041424.1 MGP_LPJ_G0021943.1 mouse_genomes_project 15 78830830 78839325 + MGP_LPJ_P0041424 Kctd17 protein_coding protein_coding MGP_LPJ_T0041425.1 MGP_LPJ_G0021943.1 mouse_genomes_project 15 78833731 78838479 + Kctd17 protein_coding retained_intron MGP_LPJ_T0041426.1 MGP_LPJ_G0021943.1 mouse_genomes_project 15 78834726 78838324 + Kctd17 protein_coding retained_intron MGP_LPJ_T0042445.1 MGP_LPJ_G0022257.1 mouse_genomes_project 15 102637586 102687900 - MGP_LPJ_P0042445 Tfcp2 protein_coding protein_coding MGP_LPJ_T0041629.1 MGP_LPJ_G0022004.1 mouse_genomes_project 15 81504039 81528115 + MGP_LPJ_P0041629 Adsl protein_coding protein_coding MGP_LPJ_T0041630.1 MGP_LPJ_G0022004.1 mouse_genomes_project 15 81504040 81526176 + MGP_LPJ_P0041630 Adsl protein_coding protein_coding MGP_LPJ_T0041631.1 MGP_LPJ_G0022004.1 mouse_genomes_project 15 81504053 81505656 + Adsl protein_coding retained_intron MGP_LPJ_T0041632.1 MGP_LPJ_G0022004.1 mouse_genomes_project 15 81504061 81526287 + MGP_LPJ_P0041632 Adsl protein_coding nonsense_mediated_decay MGP_LPJ_T0041633.1 MGP_LPJ_G0022004.1 mouse_genomes_project 15 81504068 81521657 + MGP_LPJ_P0041633 Adsl protein_coding nonsense_mediated_decay MGP_LPJ_T0041634.1 MGP_LPJ_G0022004.1 mouse_genomes_project 15 81504068 81525916 + MGP_LPJ_P0041634 Adsl protein_coding protein_coding MGP_LPJ_T0041635.1 MGP_LPJ_G0022004.1 mouse_genomes_project 15 81504086 81523291 + MGP_LPJ_P0041635 Adsl protein_coding nonsense_mediated_decay MGP_LPJ_T0041636.1 MGP_LPJ_G0022004.1 mouse_genomes_project 15 81504091 81512490 + Adsl protein_coding retained_intron MGP_LPJ_T0041637.1 MGP_LPJ_G0022004.1 mouse_genomes_project 15 81504326 81508890 + MGP_LPJ_P0041637 Adsl protein_coding protein_coding MGP_LPJ_T0041638.1 MGP_LPJ_G0022004.1 mouse_genomes_project 15 81517809 81521532 + Adsl protein_coding retained_intron MGP_LPJ_T0041639.1 MGP_LPJ_G0022004.1 mouse_genomes_project 15 81521610 81525923 + MGP_LPJ_P0041639 Adsl protein_coding nonsense_mediated_decay MGP_LPJ_T0040715.1 MGP_LPJ_G0021725.1 mouse_genomes_project 15 39769632 40218275 + MGP_LPJ_P0040715 Oxr1 protein_coding protein_coding MGP_LPJ_T0040716.1 MGP_LPJ_G0021725.1 mouse_genomes_project 15 40140254 40218280 + MGP_LPJ_P0040716 Oxr1 protein_coding protein_coding MGP_LPJ_T0040717.1 MGP_LPJ_G0021725.1 mouse_genomes_project 15 40140254 40218275 + MGP_LPJ_P0040717 Oxr1 protein_coding protein_coding MGP_LPJ_T0040718.1 MGP_LPJ_G0021725.1 mouse_genomes_project 15 40140735 40218275 + MGP_LPJ_P0040718 Oxr1 protein_coding protein_coding MGP_LPJ_T0040719.1 MGP_LPJ_G0021725.1 mouse_genomes_project 15 40140743 40218278 + MGP_LPJ_P0040719 Oxr1 protein_coding protein_coding MGP_LPJ_T0040720.1 MGP_LPJ_G0021725.1 mouse_genomes_project 15 40186682 40218275 + MGP_LPJ_P0040720 Oxr1 protein_coding protein_coding MGP_LPJ_T0041266.1 MGP_LPJ_G0021894.1 mouse_genomes_project 15 76626092 76654156 - MGP_LPJ_P0041266 Bop1 protein_coding protein_coding MGP_LPJ_T0041551.1 MGP_LPJ_G0021981.1 mouse_genomes_project 15 80156419 80158198 + MGP_LPJ_P0041551 Tomm22 protein_coding protein_coding MGP_LPJ_T0041552.1 MGP_LPJ_G0021981.1 mouse_genomes_project 15 80156649 80158005 + Tomm22 protein_coding processed_transcript MGP_LPJ_T0100371.1 MGP_LPJ_G0038634.1 mouse_genomes_project 15 24973262 24973393 - Gm23903 snoRNA snoRNA MGP_LPJ_T0040911.1 MGP_LPJ_G0021801.1 mouse_genomes_project 15 64353240 64395281 - MGP_LPJ_P0040911 Gm21961 protein_coding protein_coding MGP_LPJ_T0100410.1 MGP_LPJ_G0038673.1 mouse_genomes_project 15 101217337 101217470 - Gm25999 snoRNA snoRNA MGP_LPJ_T0040736.1 MGP_LPJ_G0021736.1 mouse_genomes_project 15 43008624 43031900 + MGP_LPJ_P0040736 Ebag9 protein_coding unknown_likely_coding MGP_LPJ_T0101893.1 MGP_LPJ_G0039930.1 mouse_genomes_project 15 75223382 75226552 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0042310.1 MGP_LPJ_G0022211.1 mouse_genomes_project 15 100699398 100704745 + MGP_LPJ_P0042310 Wnt1 protein_coding protein_coding MGP_LPJ_T0006766.1 MGP_LPJ_G0005590.1 mouse_genomes_project 15 30428932 30433022 - Snhg18 lincRNA lincRNA MGP_LPJ_T0040376.1 MGP_LPJ_G0021611.1 mouse_genomes_project 15 5270563 5425438 - MGP_LPJ_P0040376 Nipbl protein_coding protein_coding MGP_LPJ_T0013067.1 MGP_LPJ_G0011158.1 mouse_genomes_project 15 43359056 43359569 - processed_pseudogene processed_pseudogene MGP_LPJ_T0040532.1 MGP_LPJ_G0021655.1 mouse_genomes_project 15 23713946 23849468 + MGP_LPJ_P0040532 Fam134b protein_coding protein_coding MGP_LPJ_T0040533.1 MGP_LPJ_G0021655.1 mouse_genomes_project 15 23816105 23848121 + MGP_LPJ_P0040533 Fam134b protein_coding protein_coding MGP_LPJ_T0041370.1 MGP_LPJ_G0021924.1 mouse_genomes_project 15 77613039 77663588 - MGP_LPJ_P0041370 Apol7a protein_coding protein_coding MGP_LPJ_T0041374.1 MGP_LPJ_G0021924.1 mouse_genomes_project 15 77660462 77664064 - Apol7a protein_coding retained_intron MGP_LPJ_T0042429.1 MGP_LPJ_G0022251.1 mouse_genomes_project 15 102380978 102398484 + MGP_LPJ_P0042429 protein_coding protein_coding MGP_LPJ_T0042430.1 MGP_LPJ_G0022251.1 mouse_genomes_project 15 102380978 102398484 + MGP_LPJ_P0042430 protein_coding protein_coding MGP_LPJ_T0042539.1 MGP_LPJ_G0022291.1 mouse_genomes_project 15 104128667 104134026 - MGP_LPJ_P0042539 Krt1 protein_coding protein_coding MGP_LPJ_T0041907.1 MGP_LPJ_G0022088.1 mouse_genomes_project 15 86051038 86143055 - MGP_LPJ_P0041907 Smc1b protein_coding protein_coding MGP_LPJ_T0042540.1 MGP_LPJ_G0022292.1 mouse_genomes_project 15 104143292 104155693 - MGP_LPJ_P0042540 Krt77 protein_coding protein_coding MGP_LPJ_T0040400.1 MGP_LPJ_G0021616.1 mouse_genomes_project 15 6149298 6209353 + MGP_LPJ_P0040400 Lmbrd2 protein_coding protein_coding MGP_LPJ_T0040740.1 MGP_LPJ_G0021738.1 mouse_genomes_project 15 43513002 43521695 - MGP_LPJ_P0040740 Kcnv1 protein_coding protein_coding MGP_LPJ_T0040598.1 MGP_LPJ_G0021684.1 mouse_genomes_project 15 32659592 32680107 + MGP_LPJ_P0040598 Erich5 protein_coding protein_coding MGP_LPJ_T0003611.1 MGP_LPJ_G0003276.1 mouse_genomes_project 15 54319117 54322023 - 1700040F17Rik antisense antisense MGP_LPJ_T0040861.1 MGP_LPJ_G0021785.1 mouse_genomes_project 15 58004336 58037015 - MGP_LPJ_P0040861 Mtss1 protein_coding unknown_likely_coding MGP_LPJ_T0040862.1 MGP_LPJ_G0021785.1 mouse_genomes_project 15 58004350 58154659 - MGP_LPJ_P0040862 Mtss1 protein_coding protein_coding MGP_LPJ_T0100390.1 MGP_LPJ_G0038653.1 mouse_genomes_project 15 52432125 52432257 - Gm23200 snoRNA snoRNA MGP_LPJ_T0003649.1 MGP_LPJ_G0003306.1 mouse_genomes_project 15 102010836 102011960 - 2310068J16Rik antisense antisense MGP_LPJ_T0042259.1 MGP_LPJ_G0022190.1 mouse_genomes_project 15 100077272 100078598 - MGP_LPJ_P0042259 H1fnt protein_coding protein_coding MGP_LPJ_T0010044.1 MGP_LPJ_G0008162.1 mouse_genomes_project 15 19620797 19620966 - Gm44373 miRNA miRNA MGP_LPJ_T0040385.1 MGP_LPJ_G0021613.1 mouse_genomes_project 15 5998164 6068225 + MGP_LPJ_P0040385 Ranbp3l protein_coding protein_coding MGP_LPJ_T0040386.1 MGP_LPJ_G0021613.1 mouse_genomes_project 15 5998164 6029899 + MGP_LPJ_P0040386 Ranbp3l protein_coding protein_coding MGP_LPJ_T0040387.1 MGP_LPJ_G0021613.1 mouse_genomes_project 15 5998164 6066680 + MGP_LPJ_P0040387 Ranbp3l protein_coding unknown_likely_coding MGP_LPJ_T0003652.1 MGP_LPJ_G0003309.1 mouse_genomes_project 15 102836615 102845740 + Galnt6os antisense antisense MGP_LPJ_T0041371.1 MGP_LPJ_G0021925.1 mouse_genomes_project 15 77629703 77640338 - MGP_LPJ_P0041371 protein_coding protein_coding MGP_LPJ_T0041372.1 MGP_LPJ_G0021925.1 mouse_genomes_project 15 77629703 77640292 - MGP_LPJ_P0041372 protein_coding protein_coding MGP_LPJ_T0040357.1 MGP_LPJ_G0021605.1 mouse_genomes_project 15 4066726 4128740 + MGP_LPJ_P0040357 Lifr protein_coding protein_coding MGP_LPJ_T0040358.1 MGP_LPJ_G0021605.1 mouse_genomes_project 15 4066739 4122332 + MGP_LPJ_P0040358 Lifr protein_coding protein_coding MGP_LPJ_T0040359.1 MGP_LPJ_G0021605.1 mouse_genomes_project 15 4092126 4134486 + MGP_LPJ_P0040359 Lifr protein_coding protein_coding MGP_LPJ_T0041079.1 MGP_LPJ_G0021850.1 mouse_genomes_project 15 75150746 75152822 + MGP_LPJ_P0041079 protein_coding protein_coding MGP_LPJ_T0041080.1 MGP_LPJ_G0021850.1 mouse_genomes_project 15 75150746 75153179 + MGP_LPJ_P0041080 protein_coding protein_coding MGP_LPJ_T0013072.1 MGP_LPJ_G0011163.1 mouse_genomes_project 15 53162981 53163388 - processed_pseudogene processed_pseudogene MGP_LPJ_T0042290.1 MGP_LPJ_G0022203.1 mouse_genomes_project 15 100483616 100502627 - MGP_LPJ_P0042290 Adcy6 protein_coding unknown_likely_coding MGP_LPJ_T0042291.1 MGP_LPJ_G0022203.1 mouse_genomes_project 15 100483624 100502538 - MGP_LPJ_P0042291 Adcy6 protein_coding protein_coding MGP_LPJ_T0099151.1 MGP_LPJ_G0037414.1 mouse_genomes_project 15 104968359 104968466 - Gm25141 snRNA snRNA MGP_LPJ_T0042213.1 MGP_LPJ_G0022179.1 mouse_genomes_project 15 99565275 99573600 + MGP_LPJ_P0042213 Slc48a1 protein_coding protein_coding MGP_LPJ_T0042214.1 MGP_LPJ_G0022179.1 mouse_genomes_project 15 99565348 99570875 + MGP_LPJ_P0042214 Slc48a1 protein_coding nonsense_mediated_decay MGP_LPJ_T0041944.1 MGP_LPJ_G0022101.1 mouse_genomes_project 15 87152194 87236309 + MGP_LPJ_P0041944 Gramd4 protein_coding protein_coding MGP_LPJ_T0041945.1 MGP_LPJ_G0022101.1 mouse_genomes_project 15 87153226 87236293 + MGP_LPJ_P0041945 Gramd4 protein_coding protein_coding MGP_LPJ_T0041946.1 MGP_LPJ_G0022101.1 mouse_genomes_project 15 87153371 87236306 + MGP_LPJ_P0041946 Gramd4 protein_coding nonsense_mediated_decay MGP_LPJ_T0041947.1 MGP_LPJ_G0022101.1 mouse_genomes_project 15 87162309 87220939 + Gramd4 protein_coding processed_transcript MGP_LPJ_T0041948.1 MGP_LPJ_G0022101.1 mouse_genomes_project 15 87169162 87186163 + Gramd4 protein_coding processed_transcript MGP_LPJ_T0010093.1 MGP_LPJ_G0008211.1 mouse_genomes_project 15 84397096 84397173 + Gm24575 miRNA miRNA MGP_LPJ_T0013048.1 MGP_LPJ_G0011139.1 mouse_genomes_project 15 5943752 5944572 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000968.1 MGP_LPJ_G0000896.1 mouse_genomes_project 15 23076309 23076819 - TEC TEC MGP_LPJ_T0100402.1 MGP_LPJ_G0038665.1 mouse_genomes_project 15 80985604 80985741 - Gm23220 snoRNA snoRNA MGP_LPJ_T0041928.1 MGP_LPJ_G0022096.1 mouse_genomes_project 15 86889181 86896245 - MGP_LPJ_P0041928 Pkdrej protein_coding protein_coding MGP_LPJ_T0101641.1 MGP_LPJ_G0039703.1 mouse_genomes_project 15 75759016 75764319 + unitary_pseudogene processed_transcript MGP_LPJ_T0101642.1 MGP_LPJ_G0039703.1 mouse_genomes_project 15 75759362 75761367 + unitary_pseudogene processed_transcript MGP_LPJ_T0101643.1 MGP_LPJ_G0039703.1 mouse_genomes_project 15 75759371 75770529 + unitary_pseudogene processed_transcript MGP_LPJ_T0101644.1 MGP_LPJ_G0039703.1 mouse_genomes_project 15 75760373 75763849 + unitary_pseudogene unitary_pseudogene MGP_LPJ_T0101645.1 MGP_LPJ_G0039703.1 mouse_genomes_project 15 75761386 75763614 + unitary_pseudogene retained_intron MGP_LPJ_T0101646.1 MGP_LPJ_G0039703.1 mouse_genomes_project 15 75761550 75763367 + unitary_pseudogene processed_transcript MGP_LPJ_T0041045.1 MGP_LPJ_G0021839.1 mouse_genomes_project 15 74604403 74605968 - MGP_LPJ_P0041045 Ly6d protein_coding protein_coding MGP_LPJ_T0098181.1 MGP_LPJ_G0036462.1 mouse_genomes_project 15 102584567 102584677 + n-R5s43 rRNA rRNA MGP_LPJ_T0041955.1 MGP_LPJ_G0022106.1 mouse_genomes_project 15 89979964 90031189 - MGP_LPJ_P0041955 Brd1 protein_coding protein_coding MGP_LPJ_T0041956.1 MGP_LPJ_G0022106.1 mouse_genomes_project 15 89980960 90027963 - MGP_LPJ_P0041956 Brd1 protein_coding protein_coding MGP_LPJ_T0041957.1 MGP_LPJ_G0022106.1 mouse_genomes_project 15 89988712 89993813 - Brd1 protein_coding processed_transcript MGP_LPJ_T0041958.1 MGP_LPJ_G0022106.1 mouse_genomes_project 15 89991799 90032765 - MGP_LPJ_P0041958 Brd1 protein_coding protein_coding MGP_LPJ_T0041959.1 MGP_LPJ_G0022106.1 mouse_genomes_project 15 90007307 90013566 - Brd1 protein_coding processed_transcript MGP_LPJ_T0041960.1 MGP_LPJ_G0022106.1 mouse_genomes_project 15 90007840 90011451 - Brd1 protein_coding processed_transcript MGP_LPJ_T0041278.1 MGP_LPJ_G0021898.1 mouse_genomes_project 15 76692808 76699884 - MGP_LPJ_P0041278 Scrt1 protein_coding protein_coding MGP_LPJ_T0041279.1 MGP_LPJ_G0021898.1 mouse_genomes_project 15 76694166 76699657 - MGP_LPJ_P0041279 Scrt1 protein_coding protein_coding MGP_LPJ_T0042675.1 MGP_LPJ_G0022335.1 mouse_genomes_project 15 105537996 105542692 - MGP_LPJ_P0042675 Smug1 protein_coding protein_coding MGP_LPJ_T0099116.1 MGP_LPJ_G0037379.1 mouse_genomes_project 15 51281436 51281540 + Gm23545 snRNA snRNA MGP_LPJ_T0099107.1 MGP_LPJ_G0037370.1 mouse_genomes_project 15 34451528 34451687 + Gm22979 snRNA snRNA MGP_LPJ_T0010049.1 MGP_LPJ_G0008167.1 mouse_genomes_project 15 33925913 33925991 - Mir875 miRNA miRNA MGP_LPJ_T0041772.1 MGP_LPJ_G0022042.1 mouse_genomes_project 15 83002539 83006877 + Fam109b protein_coding processed_transcript MGP_LPJ_T0041774.1 MGP_LPJ_G0022042.1 mouse_genomes_project 15 83004146 83006891 + Fam109b protein_coding processed_transcript MGP_LPJ_T0041775.1 MGP_LPJ_G0022042.1 mouse_genomes_project 15 83004451 83009343 + MGP_LPJ_P0041775 Fam109b protein_coding protein_coding MGP_LPJ_T0041777.1 MGP_LPJ_G0022042.1 mouse_genomes_project 15 83004772 83009330 + MGP_LPJ_P0041777 Fam109b protein_coding protein_coding MGP_LPJ_T0040910.1 MGP_LPJ_G0021800.1 mouse_genomes_project 15 64182058 64307876 + MGP_LPJ_P0040910 Gm21798 protein_coding protein_coding MGP_LPJ_T0042398.1 MGP_LPJ_G0022241.1 mouse_genomes_project 15 101747243 101749557 + MGP_LPJ_P0042398 Cox14 protein_coding protein_coding MGP_LPJ_T0100401.1 MGP_LPJ_G0038664.1 mouse_genomes_project 15 80571305 80571399 - Snord83b snoRNA snoRNA MGP_LPJ_T0040479.1 MGP_LPJ_G0021640.1 mouse_genomes_project 15 9480363 9480825 - MGP_LPJ_P0040479 1810049J17Rik protein_coding protein_coding MGP_LPJ_T0098499.1 MGP_LPJ_G0036776.1 mouse_genomes_project 15 36090830 36093958 - Gm15940 sense_intronic sense_intronic MGP_LPJ_T0042057.1 MGP_LPJ_G0022132.1 mouse_genomes_project 15 90736117 90738158 + MGP_LPJ_P0042057 Klhdc7b protein_coding protein_coding MGP_LPJ_T0041430.1 MGP_LPJ_G0021946.1 mouse_genomes_project 15 78928707 78935013 - C1qtnf6 protein_coding processed_transcript MGP_LPJ_T0041431.1 MGP_LPJ_G0021946.1 mouse_genomes_project 15 78928707 78935013 - MGP_LPJ_P0041431 C1qtnf6 protein_coding protein_coding MGP_LPJ_T0041432.1 MGP_LPJ_G0021946.1 mouse_genomes_project 15 78930484 78932689 - C1qtnf6 protein_coding processed_transcript MGP_LPJ_T0041355.1 MGP_LPJ_G0021920.1 mouse_genomes_project 15 77148381 77150595 + MGP_LPJ_P0041355 1110038F14Rik protein_coding protein_coding MGP_LPJ_T0099100.1 MGP_LPJ_G0037363.1 mouse_genomes_project 15 9304981 9305090 - Gm25713 snRNA snRNA MGP_LPJ_T0006818.1 MGP_LPJ_G0005624.1 mouse_genomes_project 15 97916288 97948599 - 4833422M21Rik lincRNA lincRNA MGP_LPJ_T0006819.1 MGP_LPJ_G0005624.1 mouse_genomes_project 15 97916288 97933028 - 4833422M21Rik lincRNA lincRNA MGP_LPJ_T0006820.1 MGP_LPJ_G0005624.1 mouse_genomes_project 15 97942861 97948531 - 4833422M21Rik lincRNA lincRNA MGP_LPJ_T0042337.1 MGP_LPJ_G0022225.1 mouse_genomes_project 15 101204716 101213845 - MGP_LPJ_P0042337 Mcrs1 protein_coding protein_coding MGP_LPJ_T0042661.1 MGP_LPJ_G0022327.1 mouse_genomes_project 15 105306635 105308497 + MGP_LPJ_P0042661 Hoxc12 protein_coding protein_coding MGP_LPJ_T0010087.1 MGP_LPJ_G0008205.1 mouse_genomes_project 15 83238516 83238576 + Gm27825 miRNA miRNA MGP_LPJ_T0041933.1 MGP_LPJ_G0022099.1 mouse_genomes_project 15 86960209 86974605 + MGP_LPJ_P0041933 Trmu protein_coding nonsense_mediated_decay MGP_LPJ_T0041934.1 MGP_LPJ_G0022099.1 mouse_genomes_project 15 86960217 86979400 + MGP_LPJ_P0041934 Trmu protein_coding protein_coding MGP_LPJ_T0041935.1 MGP_LPJ_G0022099.1 mouse_genomes_project 15 86960278 86963745 + MGP_LPJ_P0041935 Trmu protein_coding nonsense_mediated_decay MGP_LPJ_T0041936.1 MGP_LPJ_G0022099.1 mouse_genomes_project 15 86960311 86975961 + Trmu protein_coding retained_intron MGP_LPJ_T0041937.1 MGP_LPJ_G0022099.1 mouse_genomes_project 15 86966066 86978434 + MGP_LPJ_P0041937 Trmu protein_coding nonsense_mediated_decay MGP_LPJ_T0041938.1 MGP_LPJ_G0022099.1 mouse_genomes_project 15 86974583 86976483 + Trmu protein_coding retained_intron MGP_LPJ_T0041939.1 MGP_LPJ_G0022099.1 mouse_genomes_project 15 86976213 86979400 + Trmu protein_coding processed_transcript MGP_LPJ_T0041940.1 MGP_LPJ_G0022099.1 mouse_genomes_project 15 86976757 86979067 + Trmu protein_coding retained_intron MGP_LPJ_T0041941.1 MGP_LPJ_G0022099.1 mouse_genomes_project 15 86976887 86979402 + Trmu protein_coding retained_intron MGP_LPJ_T0040972.1 MGP_LPJ_G0021815.1 mouse_genomes_project 15 68438933 68614856 + MGP_LPJ_P0040972 Khdrbs3 protein_coding protein_coding MGP_LPJ_T0099114.1 MGP_LPJ_G0037377.1 mouse_genomes_project 15 47477886 47477971 - Gm23185 snRNA snRNA MGP_LPJ_T0042377.1 MGP_LPJ_G0022235.1 mouse_genomes_project 15 101608907 101612876 + MGP_LPJ_P0042377 Aqp6 protein_coding protein_coding MGP_LPJ_T0041434.1 MGP_LPJ_G0021948.1 mouse_genomes_project 15 78964667 78981077 - MGP_LPJ_P0041434 Rac2 protein_coding protein_coding MGP_LPJ_T0098500.1 MGP_LPJ_G0036777.1 mouse_genomes_project 15 72535521 72540246 - Peg13 sense_intronic sense_intronic MGP_LPJ_T0042254.1 MGP_LPJ_G0022188.1 mouse_genomes_project 15 99991030 100001881 - MGP_LPJ_P0042254 protein_coding protein_coding MGP_LPJ_T0042255.1 MGP_LPJ_G0022188.1 mouse_genomes_project 15 99994650 100001784 - protein_coding processed_transcript MGP_LPJ_T0042135.1 MGP_LPJ_G0022152.1 mouse_genomes_project 15 93935498 94289641 + MGP_LPJ_P0042135 Pdzrn4 protein_coding protein_coding MGP_LPJ_T0042136.1 MGP_LPJ_G0022152.1 mouse_genomes_project 15 94131308 94289641 + MGP_LPJ_P0042136 Pdzrn4 protein_coding protein_coding MGP_LPJ_T0040539.1 MGP_LPJ_G0021658.1 mouse_genomes_project 15 24438703 24799606 - MGP_LPJ_P0040539 Fbxl7 protein_coding protein_coding MGP_LPJ_T0040559.1 MGP_LPJ_G0021669.1 mouse_genomes_project 15 29552988 29566947 - MGP_LPJ_P0040559 Ropn1l protein_coding protein_coding MGP_LPJ_T0040377.1 MGP_LPJ_G0021612.1 mouse_genomes_project 15 5628551 5706614 - MGP_LPJ_P0040377 Slc1a3 protein_coding protein_coding MGP_LPJ_T0040378.1 MGP_LPJ_G0021612.1 mouse_genomes_project 15 5629154 5647787 - Slc1a3 protein_coding retained_intron MGP_LPJ_T0040379.1 MGP_LPJ_G0021612.1 mouse_genomes_project 15 5636705 5637714 - Slc1a3 protein_coding retained_intron MGP_LPJ_T0040380.1 MGP_LPJ_G0021612.1 mouse_genomes_project 15 5674799 5706266 - Slc1a3 protein_coding processed_transcript MGP_LPJ_T0040381.1 MGP_LPJ_G0021612.1 mouse_genomes_project 15 5680330 5706259 - MGP_LPJ_P0040381 Slc1a3 protein_coding protein_coding MGP_LPJ_T0040382.1 MGP_LPJ_G0021612.1 mouse_genomes_project 15 5682212 5706346 - Slc1a3 protein_coding retained_intron MGP_LPJ_T0040383.1 MGP_LPJ_G0021612.1 mouse_genomes_project 15 5703459 5706331 - Slc1a3 protein_coding retained_intron MGP_LPJ_T0040384.1 MGP_LPJ_G0021612.1 mouse_genomes_project 15 5704592 5705438 - Slc1a3 protein_coding processed_transcript MGP_LPJ_T0041664.1 MGP_LPJ_G0022010.1 mouse_genomes_project 15 81943877 81980404 - MGP_LPJ_P0041664 St13 protein_coding protein_coding MGP_LPJ_T0041665.1 MGP_LPJ_G0022010.1 mouse_genomes_project 15 81945658 81979955 - MGP_LPJ_P0041665 St13 protein_coding protein_coding MGP_LPJ_T0041666.1 MGP_LPJ_G0022010.1 mouse_genomes_project 15 81957971 81979744 - MGP_LPJ_P0041666 St13 protein_coding protein_coding MGP_LPJ_T0041667.1 MGP_LPJ_G0022010.1 mouse_genomes_project 15 81970021 81980438 - MGP_LPJ_P0041667 St13 protein_coding protein_coding MGP_LPJ_T0041668.1 MGP_LPJ_G0022010.1 mouse_genomes_project 15 81972631 81980434 - MGP_LPJ_P0041668 St13 protein_coding protein_coding MGP_LPJ_T0042605.1 MGP_LPJ_G0022316.1 mouse_genomes_project 15 104793201 104794763 + MGP_LPJ_P0042605 Prr13 protein_coding protein_coding MGP_LPJ_T0042606.1 MGP_LPJ_G0022316.1 mouse_genomes_project 15 104793348 104796980 + MGP_LPJ_P0042606 Prr13 protein_coding protein_coding MGP_LPJ_T0042607.1 MGP_LPJ_G0022316.1 mouse_genomes_project 15 104793375 104796956 + MGP_LPJ_P0042607 Prr13 protein_coding protein_coding MGP_LPJ_T0042608.1 MGP_LPJ_G0022316.1 mouse_genomes_project 15 104793405 104796958 + MGP_LPJ_P0042608 Prr13 protein_coding protein_coding MGP_LPJ_T0042609.1 MGP_LPJ_G0022316.1 mouse_genomes_project 15 104794257 104796950 + MGP_LPJ_P0042609 Prr13 protein_coding protein_coding MGP_LPJ_T0042153.1 MGP_LPJ_G0022157.1 mouse_genomes_project 15 95026848 95129949 - MGP_LPJ_P0042153 Prickle1 protein_coding protein_coding MGP_LPJ_T0042154.1 MGP_LPJ_G0022157.1 mouse_genomes_project 15 95026848 95051207 - MGP_LPJ_P0042154 Prickle1 protein_coding protein_coding MGP_LPJ_T0040685.1 MGP_LPJ_G0021712.1 mouse_genomes_project 15 36872093 36906297 - MGP_LPJ_P0040685 Azin1 protein_coding nonsense_mediated_decay MGP_LPJ_T0040686.1 MGP_LPJ_G0021712.1 mouse_genomes_project 15 36874212 36906439 - MGP_LPJ_P0040686 Azin1 protein_coding protein_coding MGP_LPJ_T0040687.1 MGP_LPJ_G0021712.1 mouse_genomes_project 15 36876526 36881198 - Azin1 protein_coding retained_intron MGP_LPJ_T0040688.1 MGP_LPJ_G0021712.1 mouse_genomes_project 15 36884337 36905290 - MGP_LPJ_P0040688 Azin1 protein_coding protein_coding MGP_LPJ_T0040689.1 MGP_LPJ_G0021712.1 mouse_genomes_project 15 36886086 36905349 - MGP_LPJ_P0040689 Azin1 protein_coding protein_coding MGP_LPJ_T0040690.1 MGP_LPJ_G0021712.1 mouse_genomes_project 15 36901601 36906378 - Azin1 protein_coding processed_transcript MGP_LPJ_T0041058.1 MGP_LPJ_G0021845.1 mouse_genomes_project 15 74719813 74726435 - MGP_LPJ_P0041058 protein_coding protein_coding MGP_LPJ_T0040360.1 MGP_LPJ_G0021606.1 mouse_genomes_project 15 4143179 4334653 - MGP_LPJ_P0040360 Egflam protein_coding protein_coding MGP_LPJ_T0040361.1 MGP_LPJ_G0021606.1 mouse_genomes_project 15 4143637 4334700 - MGP_LPJ_P0040361 Egflam protein_coding protein_coding MGP_LPJ_T0040362.1 MGP_LPJ_G0021606.1 mouse_genomes_project 15 4143642 4334744 - MGP_LPJ_P0040362 Egflam protein_coding nonsense_mediated_decay MGP_LPJ_T0040363.1 MGP_LPJ_G0021606.1 mouse_genomes_project 15 4149182 4159927 - Egflam protein_coding retained_intron MGP_LPJ_T0040364.1 MGP_LPJ_G0021606.1 mouse_genomes_project 15 4169988 4334618 - Egflam protein_coding retained_intron MGP_LPJ_T0040365.1 MGP_LPJ_G0021606.1 mouse_genomes_project 15 4191577 4192835 - Egflam protein_coding processed_transcript MGP_LPJ_T0040366.1 MGP_LPJ_G0021606.1 mouse_genomes_project 15 4238862 4334610 - Egflam protein_coding retained_intron MGP_LPJ_T0040888.1 MGP_LPJ_G0021797.1 mouse_genomes_project 15 63267390 63409954 - MGP_LPJ_P0040888 Fam49b protein_coding protein_coding MGP_LPJ_T0040889.1 MGP_LPJ_G0021797.1 mouse_genomes_project 15 63269237 63345814 - MGP_LPJ_P0040889 Fam49b protein_coding protein_coding MGP_LPJ_T0040996.1 MGP_LPJ_G0021824.1 mouse_genomes_project 15 73343690 73372536 - MGP_LPJ_P0040996 Slc45a4 protein_coding protein_coding MGP_LPJ_T0040997.1 MGP_LPJ_G0021824.1 mouse_genomes_project 15 73343700 73393889 - MGP_LPJ_P0040997 Slc45a4 protein_coding protein_coding MGP_LPJ_T0040998.1 MGP_LPJ_G0021824.1 mouse_genomes_project 15 73346566 73372581 - MGP_LPJ_P0040998 Slc45a4 protein_coding protein_coding MGP_LPJ_T0040999.1 MGP_LPJ_G0021824.1 mouse_genomes_project 15 73346566 73384379 - MGP_LPJ_P0040999 Slc45a4 protein_coding protein_coding MGP_LPJ_T0041000.1 MGP_LPJ_G0021824.1 mouse_genomes_project 15 73346569 73393889 - MGP_LPJ_P0041000 Slc45a4 protein_coding protein_coding MGP_LPJ_T0041001.1 MGP_LPJ_G0021824.1 mouse_genomes_project 15 73353170 73355239 - MGP_LPJ_P0041001 Slc45a4 protein_coding protein_coding MGP_LPJ_T0041002.1 MGP_LPJ_G0021824.1 mouse_genomes_project 15 73372647 73418173 - MGP_LPJ_P0041002 Slc45a4 protein_coding protein_coding MGP_LPJ_T0041003.1 MGP_LPJ_G0021824.1 mouse_genomes_project 15 73373002 73417752 - Slc45a4 protein_coding processed_transcript MGP_LPJ_T0042266.1 MGP_LPJ_G0022195.1 mouse_genomes_project 15 100260749 100279129 + MGP_LPJ_P0042266 1700031M16Rik protein_coding protein_coding MGP_LPJ_T0042267.1 MGP_LPJ_G0022195.1 mouse_genomes_project 15 100260756 100281823 + MGP_LPJ_P0042267 1700031M16Rik protein_coding protein_coding MGP_LPJ_T0042268.1 MGP_LPJ_G0022195.1 mouse_genomes_project 15 100260775 100278340 + 1700031M16Rik protein_coding processed_transcript MGP_LPJ_T0042269.1 MGP_LPJ_G0022195.1 mouse_genomes_project 15 100260775 100280943 + 1700031M16Rik protein_coding processed_transcript MGP_LPJ_T0042270.1 MGP_LPJ_G0022195.1 mouse_genomes_project 15 100260775 100280943 + 1700031M16Rik protein_coding processed_transcript MGP_LPJ_T0042271.1 MGP_LPJ_G0022195.1 mouse_genomes_project 15 100260775 100281694 + MGP_LPJ_P0042271 1700031M16Rik protein_coding protein_coding MGP_LPJ_T0042272.1 MGP_LPJ_G0022195.1 mouse_genomes_project 15 100260775 100281827 + MGP_LPJ_P0042272 1700031M16Rik protein_coding protein_coding MGP_LPJ_T0040439.1 MGP_LPJ_G0021626.1 mouse_genomes_project 15 7511538 7522733 - MGP_LPJ_P0040439 Brix1 protein_coding protein_coding MGP_LPJ_T0040440.1 MGP_LPJ_G0021626.1 mouse_genomes_project 15 7515509 7522173 - MGP_LPJ_P0040440 Brix1 protein_coding protein_coding MGP_LPJ_T0040441.1 MGP_LPJ_G0021626.1 mouse_genomes_project 15 7515880 7522695 - MGP_LPJ_P0040441 Brix1 protein_coding protein_coding MGP_LPJ_T0040442.1 MGP_LPJ_G0021626.1 mouse_genomes_project 15 7516388 7522673 - MGP_LPJ_P0040442 Brix1 protein_coding nonsense_mediated_decay MGP_LPJ_T0042575.1 MGP_LPJ_G0022308.1 mouse_genomes_project 15 104602715 104605004 + MGP_LPJ_P0042575 Mfsd5 protein_coding protein_coding MGP_LPJ_T0042182.1 MGP_LPJ_G0022169.1 mouse_genomes_project 15 98119580 98168402 - MGP_LPJ_P0042182 Scaf11 protein_coding protein_coding MGP_LPJ_T0042183.1 MGP_LPJ_G0022169.1 mouse_genomes_project 15 98122670 98168413 - MGP_LPJ_P0042183 Scaf11 protein_coding unknown_likely_coding MGP_LPJ_T0000979.1 MGP_LPJ_G0000907.1 mouse_genomes_project 15 105797075 105797412 + TEC TEC MGP_LPJ_T0100380.1 MGP_LPJ_G0038643.1 mouse_genomes_project 15 32645740 32645872 - Gm24523 snoRNA snoRNA MGP_LPJ_T0042667.1 MGP_LPJ_G0022332.1 mouse_genomes_project 15 105362540 105365755 + MGP_LPJ_P0042667 Hoxc8 protein_coding protein_coding MGP_LPJ_T0042668.1 MGP_LPJ_G0022332.1 mouse_genomes_project 15 105363822 105366045 + Hoxc8 protein_coding retained_intron MGP_LPJ_T0041405.1 MGP_LPJ_G0021939.1 mouse_genomes_project 15 78577880 78596153 + MGP_LPJ_P0041405 Ncf4 protein_coding protein_coding MGP_LPJ_T0041406.1 MGP_LPJ_G0021939.1 mouse_genomes_project 15 78577923 78594561 + MGP_LPJ_P0041406 Ncf4 protein_coding protein_coding MGP_LPJ_T0041407.1 MGP_LPJ_G0021939.1 mouse_genomes_project 15 78586099 78589098 + Ncf4 protein_coding retained_intron MGP_LPJ_T0041408.1 MGP_LPJ_G0021939.1 mouse_genomes_project 15 78586313 78594336 + Ncf4 protein_coding processed_transcript MGP_LPJ_T0041409.1 MGP_LPJ_G0021939.1 mouse_genomes_project 15 78588519 78594369 + Ncf4 protein_coding retained_intron MGP_LPJ_T0041410.1 MGP_LPJ_G0021939.1 mouse_genomes_project 15 78594444 78596148 + Ncf4 protein_coding retained_intron MGP_LPJ_T0100366.1 MGP_LPJ_G0038629.1 mouse_genomes_project 15 8455693 8455820 - Gm24844 snoRNA snoRNA MGP_LPJ_T0042557.1 MGP_LPJ_G0022304.1 mouse_genomes_project 15 104492653 104520141 - MGP_LPJ_P0042557 Csad protein_coding protein_coding MGP_LPJ_T0010053.1 MGP_LPJ_G0008171.1 mouse_genomes_project 15 36594894 36595003 + Gm24098 miRNA miRNA MGP_LPJ_T0006767.1 MGP_LPJ_G0005591.1 mouse_genomes_project 15 35329229 35365422 + Gm26766 lincRNA lincRNA MGP_LPJ_T0041768.1 MGP_LPJ_G0022039.1 mouse_genomes_project 15 82933917 82953419 + MGP_LPJ_P0041768 Sept3 protein_coding protein_coding MGP_LPJ_T0041769.1 MGP_LPJ_G0022039.1 mouse_genomes_project 15 82934229 82951035 + MGP_LPJ_P0041769 Sept3 protein_coding protein_coding MGP_LPJ_T0040792.1 MGP_LPJ_G0021758.1 mouse_genomes_project 15 53985344 54138244 + MGP_LPJ_P0040792 Deptor protein_coding protein_coding MGP_LPJ_T0040793.1 MGP_LPJ_G0021758.1 mouse_genomes_project 15 53985451 54096109 + MGP_LPJ_P0040793 Deptor protein_coding protein_coding MGP_LPJ_T0040794.1 MGP_LPJ_G0021758.1 mouse_genomes_project 15 54006466 54130262 + MGP_LPJ_P0040794 Deptor protein_coding protein_coding MGP_LPJ_T0010073.1 MGP_LPJ_G0008191.1 mouse_genomes_project 15 79828511 79828584 - Mir1943 miRNA miRNA MGP_LPJ_T0042535.1 MGP_LPJ_G0022288.1 mouse_genomes_project 15 104060402 104070502 - MGP_LPJ_P0042535 Krt72 protein_coding protein_coding MGP_LPJ_T0042536.1 MGP_LPJ_G0022288.1 mouse_genomes_project 15 104060563 104062924 - Krt72 protein_coding processed_transcript MGP_LPJ_T0010047.1 MGP_LPJ_G0008165.1 mouse_genomes_project 15 27774213 27774287 - Mir3964 miRNA miRNA MGP_LPJ_T0041144.1 MGP_LPJ_G0021872.1 mouse_genomes_project 15 76126084 76128140 + Mapk15 protein_coding processed_transcript MGP_LPJ_T0041145.1 MGP_LPJ_G0021872.1 mouse_genomes_project 15 76126084 76131468 + MGP_LPJ_P0041145 Mapk15 protein_coding protein_coding MGP_LPJ_T0041146.1 MGP_LPJ_G0021872.1 mouse_genomes_project 15 76128254 76131468 + Mapk15 protein_coding retained_intron MGP_LPJ_T0041147.1 MGP_LPJ_G0021872.1 mouse_genomes_project 15 76129028 76131468 + Mapk15 protein_coding processed_transcript MGP_LPJ_T0013068.1 MGP_LPJ_G0011159.1 mouse_genomes_project 15 43359056 43359614 - processed_pseudogene processed_pseudogene MGP_LPJ_T0042705.1 MGP_LPJ_G0022345.1 mouse_genomes_project 15 105870288 105916071 + MGP_LPJ_P0042705 Nckap1l protein_coding protein_coding MGP_LPJ_T0041508.1 MGP_LPJ_G0021969.1 mouse_genomes_project 15 79699658 79703405 - MGP_LPJ_P0041508 Slc16a8 protein_coding protein_coding MGP_LPJ_T0042054.1 MGP_LPJ_G0022130.1 mouse_genomes_project 15 90720778 90726305 - MGP_LPJ_P0042054 Tymp protein_coding protein_coding MGP_LPJ_T0042393.1 MGP_LPJ_G0022238.1 mouse_genomes_project 15 101721057 101721344 - MGP_LPJ_P0042393 Gm17349 protein_coding protein_coding MGP_LPJ_T0040810.1 MGP_LPJ_G0021762.1 mouse_genomes_project 15 54535209 54820900 - MGP_LPJ_P0040810 Sntb1 protein_coding protein_coding MGP_LPJ_T0040811.1 MGP_LPJ_G0021762.1 mouse_genomes_project 15 54698730 54820673 - MGP_LPJ_P0040811 Sntb1 protein_coding protein_coding MGP_LPJ_T0040812.1 MGP_LPJ_G0021762.1 mouse_genomes_project 15 54699704 54820261 - Sntb1 protein_coding processed_transcript MGP_LPJ_T0042516.1 MGP_LPJ_G0022274.1 mouse_genomes_project 15 103613763 103614704 + Krt7 protein_coding processed_transcript MGP_LPJ_T0042517.1 MGP_LPJ_G0022274.1 mouse_genomes_project 15 103613772 103615116 + Krt7 protein_coding processed_transcript MGP_LPJ_T0042518.1 MGP_LPJ_G0022274.1 mouse_genomes_project 15 103613772 103630312 + Krt7 protein_coding processed_transcript MGP_LPJ_T0042519.1 MGP_LPJ_G0022274.1 mouse_genomes_project 15 103613823 103622208 + MGP_LPJ_P0042519 Krt7 protein_coding protein_coding MGP_LPJ_T0042520.1 MGP_LPJ_G0022274.1 mouse_genomes_project 15 103615122 103633016 + MGP_LPJ_P0042520 Krt7 protein_coding protein_coding MGP_LPJ_T0042521.1 MGP_LPJ_G0022274.1 mouse_genomes_project 15 103615169 103630490 + Krt7 protein_coding retained_intron MGP_LPJ_T0040799.1 MGP_LPJ_G0021760.1 mouse_genomes_project 15 54422053 54446853 - MGP_LPJ_P0040799 Mrpl13 protein_coding protein_coding MGP_LPJ_T0040800.1 MGP_LPJ_G0021760.1 mouse_genomes_project 15 54422053 54446454 - MGP_LPJ_P0040800 Mrpl13 protein_coding nonsense_mediated_decay MGP_LPJ_T0040801.1 MGP_LPJ_G0021760.1 mouse_genomes_project 15 54426595 54436130 - MGP_LPJ_P0040801 Mrpl13 protein_coding protein_coding MGP_LPJ_T0040802.1 MGP_LPJ_G0021760.1 mouse_genomes_project 15 54430830 54446388 - Mrpl13 protein_coding retained_intron MGP_LPJ_T0040803.1 MGP_LPJ_G0021760.1 mouse_genomes_project 15 54437419 54446380 - Mrpl13 protein_coding retained_intron MGP_LPJ_T0006804.1 MGP_LPJ_G0005615.1 mouse_genomes_project 15 83794134 83803017 + AW121686 lincRNA lincRNA MGP_LPJ_T0040501.1 MGP_LPJ_G0021646.1 mouse_genomes_project 15 14216928 14299107 + MGP_LPJ_P0040501 Cdh9 protein_coding protein_coding MGP_LPJ_T0011406.1 MGP_LPJ_G0009524.1 mouse_genomes_project 15 61340376 61340462 + Gm27718 misc_RNA misc_RNA MGP_LPJ_T0042303.1 MGP_LPJ_G0022207.1 mouse_genomes_project 15 100611387 100626087 + MGP_LPJ_P0042303 Ccdc65 protein_coding protein_coding MGP_LPJ_T0041613.1 MGP_LPJ_G0021996.1 mouse_genomes_project 15 80743887 80760998 + MGP_LPJ_P0041613 Mief1 protein_coding protein_coding MGP_LPJ_T0041614.1 MGP_LPJ_G0021996.1 mouse_genomes_project 15 80743915 80758170 + MGP_LPJ_P0041614 Mief1 protein_coding protein_coding MGP_LPJ_T0040646.1 MGP_LPJ_G0021702.1 mouse_genomes_project 15 35091276 35116746 - MGP_LPJ_P0040646 Ywhaz protein_coding protein_coding MGP_LPJ_T0040647.1 MGP_LPJ_G0021702.1 mouse_genomes_project 15 35092069 35116739 - MGP_LPJ_P0040647 Ywhaz protein_coding protein_coding MGP_LPJ_T0040648.1 MGP_LPJ_G0021702.1 mouse_genomes_project 15 35092204 35116044 - MGP_LPJ_P0040648 Ywhaz protein_coding protein_coding MGP_LPJ_T0040649.1 MGP_LPJ_G0021702.1 mouse_genomes_project 15 35095771 35115726 - Ywhaz protein_coding retained_intron MGP_LPJ_T0040650.1 MGP_LPJ_G0021702.1 mouse_genomes_project 15 35112910 35114621 - MGP_LPJ_P0040650 Ywhaz protein_coding protein_coding MGP_LPJ_T0040651.1 MGP_LPJ_G0021702.1 mouse_genomes_project 15 35113042 35115417 - MGP_LPJ_P0040651 Ywhaz protein_coding protein_coding MGP_LPJ_T0040652.1 MGP_LPJ_G0021702.1 mouse_genomes_project 15 35113097 35116755 - MGP_LPJ_P0040652 Ywhaz protein_coding protein_coding MGP_LPJ_T0041248.1 MGP_LPJ_G0021892.1 mouse_genomes_project 15 76538028 76541009 - MGP_LPJ_P0041248 Tssk5 protein_coding protein_coding MGP_LPJ_T0041150.1 MGP_LPJ_G0021874.1 mouse_genomes_project 15 76142191 76179943 + MGP_LPJ_P0041150 protein_coding protein_coding MGP_LPJ_T0041151.1 MGP_LPJ_G0021874.1 mouse_genomes_project 15 76148205 76179422 + MGP_LPJ_P0041151 protein_coding protein_coding MGP_LPJ_T0041152.1 MGP_LPJ_G0021874.1 mouse_genomes_project 15 76178955 76182548 + protein_coding processed_transcript MGP_LPJ_T0041153.1 MGP_LPJ_G0021874.1 mouse_genomes_project 15 76179654 76190930 + protein_coding processed_transcript MGP_LPJ_T0041154.1 MGP_LPJ_G0021874.1 mouse_genomes_project 15 76181349 76182609 + protein_coding retained_intron MGP_LPJ_T0042374.1 MGP_LPJ_G0022233.1 mouse_genomes_project 15 101584324 101589800 + MGP_LPJ_P0042374 Aqp2 protein_coding protein_coding MGP_LPJ_T0011419.1 MGP_LPJ_G0009537.1 mouse_genomes_project 15 105320579 105320736 + Gm27535 misc_RNA misc_RNA MGP_LPJ_T0040855.1 MGP_LPJ_G0021780.1 mouse_genomes_project 15 57906408 57907140 - MGP_LPJ_P0040855 Ube2d4 protein_coding protein_coding MGP_LPJ_T0041611.1 MGP_LPJ_G0021994.1 mouse_genomes_project 15 80630611 80662396 + MGP_LPJ_P0041611 Tab1 protein_coding protein_coding MGP_LPJ_T0041280.1 MGP_LPJ_G0021899.1 mouse_genomes_project 15 76714502 76717519 - MGP_LPJ_P0041280 Fbxl6 protein_coding protein_coding MGP_LPJ_T0041349.1 MGP_LPJ_G0021915.1 mouse_genomes_project 15 77044247 77063986 - MGP_LPJ_P0041349 Zfp251 protein_coding protein_coding MGP_LPJ_T0010048.1 MGP_LPJ_G0008166.1 mouse_genomes_project 15 33925774 33925862 - Mir599 miRNA miRNA MGP_LPJ_T0006762.1 MGP_LPJ_G0005587.1 mouse_genomes_project 15 15590581 15686900 - 4921515E04Rik lincRNA lincRNA MGP_LPJ_T0100400.1 MGP_LPJ_G0038663.1 mouse_genomes_project 15 75885556 75885687 + Gm23747 snoRNA snoRNA MGP_LPJ_T0041306.1 MGP_LPJ_G0021905.1 mouse_genomes_project 15 76825298 76841987 - MGP_LPJ_P0041306 Cyhr1 protein_coding protein_coding MGP_LPJ_T0041307.1 MGP_LPJ_G0021905.1 mouse_genomes_project 15 76828828 76838823 - MGP_LPJ_P0041307 Cyhr1 protein_coding protein_coding MGP_LPJ_T0041308.1 MGP_LPJ_G0021905.1 mouse_genomes_project 15 76840042 76842043 - MGP_LPJ_P0041308 Cyhr1 protein_coding protein_coding MGP_LPJ_T0041309.1 MGP_LPJ_G0021905.1 mouse_genomes_project 15 76840046 76842034 - MGP_LPJ_P0041309 Cyhr1 protein_coding protein_coding MGP_LPJ_T0042076.1 MGP_LPJ_G0022138.1 mouse_genomes_project 15 90833150 90838096 - MGP_LPJ_P0042076 Arsa protein_coding protein_coding MGP_LPJ_T0042077.1 MGP_LPJ_G0022138.1 mouse_genomes_project 15 90833202 90836788 - Arsa protein_coding retained_intron MGP_LPJ_T0042078.1 MGP_LPJ_G0022138.1 mouse_genomes_project 15 90833914 90834946 - MGP_LPJ_P0042078 Arsa protein_coding protein_coding MGP_LPJ_T0042079.1 MGP_LPJ_G0022138.1 mouse_genomes_project 15 90836905 90838082 - Arsa protein_coding processed_transcript MGP_LPJ_T0040953.1 MGP_LPJ_G0021812.1 mouse_genomes_project 15 66347064 66389472 - MGP_LPJ_P0040953 Ndrg1 protein_coding protein_coding MGP_LPJ_T0040954.1 MGP_LPJ_G0021812.1 mouse_genomes_project 15 66348609 66352213 - Ndrg1 protein_coding retained_intron MGP_LPJ_T0040955.1 MGP_LPJ_G0021812.1 mouse_genomes_project 15 66348820 66389471 - MGP_LPJ_P0040955 Ndrg1 protein_coding protein_coding MGP_LPJ_T0040956.1 MGP_LPJ_G0021812.1 mouse_genomes_project 15 66351901 66389471 - Ndrg1 protein_coding retained_intron MGP_LPJ_T0040957.1 MGP_LPJ_G0021812.1 mouse_genomes_project 15 66359755 66389471 - MGP_LPJ_P0040957 Ndrg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0040958.1 MGP_LPJ_G0021812.1 mouse_genomes_project 15 66360817 66389471 - MGP_LPJ_P0040958 Ndrg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0040959.1 MGP_LPJ_G0021812.1 mouse_genomes_project 15 66360822 66366220 - MGP_LPJ_P0040959 Ndrg1 protein_coding protein_coding MGP_LPJ_T0040960.1 MGP_LPJ_G0021812.1 mouse_genomes_project 15 66360822 66387757 - MGP_LPJ_P0040960 Ndrg1 protein_coding protein_coding MGP_LPJ_T0040961.1 MGP_LPJ_G0021812.1 mouse_genomes_project 15 66360835 66389448 - MGP_LPJ_P0040961 Ndrg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0040962.1 MGP_LPJ_G0021812.1 mouse_genomes_project 15 66360840 66389427 - MGP_LPJ_P0040962 Ndrg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0040963.1 MGP_LPJ_G0021812.1 mouse_genomes_project 15 66360872 66389448 - MGP_LPJ_P0040963 Ndrg1 protein_coding protein_coding MGP_LPJ_T0040964.1 MGP_LPJ_G0021812.1 mouse_genomes_project 15 66360879 66387772 - MGP_LPJ_P0040964 Ndrg1 protein_coding protein_coding MGP_LPJ_T0040965.1 MGP_LPJ_G0021812.1 mouse_genomes_project 15 66364277 66389472 - MGP_LPJ_P0040965 Ndrg1 protein_coding protein_coding MGP_LPJ_T0099125.1 MGP_LPJ_G0037388.1 mouse_genomes_project 15 68183695 68183802 + Gm25987 snRNA snRNA MGP_LPJ_T0010056.1 MGP_LPJ_G0008174.1 mouse_genomes_project 15 44880329 44880391 - Gm23562 miRNA miRNA MGP_LPJ_T0040771.1 MGP_LPJ_G0021748.1 mouse_genomes_project 15 52275772 52738651 - Samd12 protein_coding processed_transcript MGP_LPJ_T0040772.1 MGP_LPJ_G0021748.1 mouse_genomes_project 15 52275952 52738644 - MGP_LPJ_P0040772 Samd12 protein_coding protein_coding MGP_LPJ_T0040773.1 MGP_LPJ_G0021748.1 mouse_genomes_project 15 52276345 52738495 - MGP_LPJ_P0040773 Samd12 protein_coding nonsense_mediated_decay MGP_LPJ_T0040774.1 MGP_LPJ_G0021748.1 mouse_genomes_project 15 52652622 52738651 - Samd12 protein_coding processed_transcript MGP_LPJ_T0041717.1 MGP_LPJ_G0022022.1 mouse_genomes_project 15 82466569 82476620 - MGP_LPJ_P0041717 Tob2 protein_coding protein_coding MGP_LPJ_T0041359.1 MGP_LPJ_G0021922.1 mouse_genomes_project 15 77248900 77262737 + MGP_LPJ_P0041359 Apol6 protein_coding nonsense_mediated_decay MGP_LPJ_T0041360.1 MGP_LPJ_G0021922.1 mouse_genomes_project 15 77249246 77258784 + MGP_LPJ_P0041360 Apol6 protein_coding protein_coding MGP_LPJ_T0041361.1 MGP_LPJ_G0021922.1 mouse_genomes_project 15 77249377 77257127 + MGP_LPJ_P0041361 Apol6 protein_coding protein_coding MGP_LPJ_T0041362.1 MGP_LPJ_G0021922.1 mouse_genomes_project 15 77249447 77263546 + MGP_LPJ_P0041362 Apol6 protein_coding protein_coding MGP_LPJ_T0041363.1 MGP_LPJ_G0021922.1 mouse_genomes_project 15 77249449 77257748 + MGP_LPJ_P0041363 Apol6 protein_coding protein_coding MGP_LPJ_T0041364.1 MGP_LPJ_G0021922.1 mouse_genomes_project 15 77249658 77250410 + Apol6 protein_coding processed_transcript MGP_LPJ_T0041365.1 MGP_LPJ_G0021922.1 mouse_genomes_project 15 77259186 77262483 + Apol6 protein_coding processed_transcript MGP_LPJ_T0041837.1 MGP_LPJ_G0022066.1 mouse_genomes_project 15 84428980 84437896 - MGP_LPJ_P0041837 Mcat protein_coding protein_coding MGP_LPJ_T0040298.1 MGP_LPJ_G0021587.1 mouse_genomes_project 15 829526 843222 - MGP_LPJ_P0040298 AW549877 protein_coding protein_coding MGP_LPJ_T0041573.1 MGP_LPJ_G0021988.1 mouse_genomes_project 15 80309876 80320188 - MGP_LPJ_P0041573 Cbx6 protein_coding protein_coding MGP_LPJ_T0041574.1 MGP_LPJ_G0021988.1 mouse_genomes_project 15 80312114 80320214 - MGP_LPJ_P0041574 Cbx6 protein_coding protein_coding MGP_LPJ_T0041575.1 MGP_LPJ_G0021988.1 mouse_genomes_project 15 80314609 80319774 - Cbx6 protein_coding processed_transcript MGP_LPJ_T0041576.1 MGP_LPJ_G0021988.1 mouse_genomes_project 15 80314750 80320257 - MGP_LPJ_P0041576 Cbx6 protein_coding protein_coding MGP_LPJ_T0041577.1 MGP_LPJ_G0021988.1 mouse_genomes_project 15 80318547 80320302 - Cbx6 protein_coding processed_transcript MGP_LPJ_T0041578.1 MGP_LPJ_G0021988.1 mouse_genomes_project 15 80319220 80320251 - Cbx6 protein_coding processed_transcript MGP_LPJ_T0098173.1 MGP_LPJ_G0036454.1 mouse_genomes_project 15 10175053 10175153 + Gm24664 rRNA rRNA MGP_LPJ_T0003646.1 MGP_LPJ_G0003304.1 mouse_genomes_project 15 101850361 101864982 + Gm17057 antisense antisense MGP_LPJ_T0042289.1 MGP_LPJ_G0022202.1 mouse_genomes_project 15 100462708 100483219 + MGP_LPJ_P0042289 4930415O20Rik protein_coding protein_coding MGP_LPJ_T0040669.1 MGP_LPJ_G0021707.1 mouse_genomes_project 15 35754218 35769212 + MGP_LPJ_P0040669 4930447A16Rik protein_coding protein_coding MGP_LPJ_T0010080.1 MGP_LPJ_G0008198.1 mouse_genomes_project 15 82182024 82182078 + Gm23880 miRNA miRNA MGP_LPJ_T0041553.1 MGP_LPJ_G0021982.1 mouse_genomes_project 15 80159581 80175454 - MGP_LPJ_P0041553 Josd1 protein_coding protein_coding MGP_LPJ_T0099142.1 MGP_LPJ_G0037405.1 mouse_genomes_project 15 91446137 91446244 - Gm24415 snRNA snRNA MGP_LPJ_T0041048.1 MGP_LPJ_G0021841.1 mouse_genomes_project 15 74644174 74647287 - MGP_LPJ_P0041048 Ly6k protein_coding protein_coding MGP_LPJ_T0041049.1 MGP_LPJ_G0021841.1 mouse_genomes_project 15 74644174 74646834 - MGP_LPJ_P0041049 Ly6k protein_coding protein_coding MGP_LPJ_T0041087.1 MGP_LPJ_G0021855.1 mouse_genomes_project 15 75661031 75679907 - MGP_LPJ_P0041087 Ly6h protein_coding protein_coding MGP_LPJ_T0041088.1 MGP_LPJ_G0021855.1 mouse_genomes_project 15 75663852 75679907 - MGP_LPJ_P0041088 Ly6h protein_coding nonsense_mediated_decay MGP_LPJ_T0041089.1 MGP_LPJ_G0021855.1 mouse_genomes_project 15 75677999 75680514 - MGP_LPJ_P0041089 Ly6h protein_coding protein_coding MGP_LPJ_T0041090.1 MGP_LPJ_G0021855.1 mouse_genomes_project 15 75678000 75680115 - MGP_LPJ_P0041090 Ly6h protein_coding protein_coding MGP_LPJ_T0041091.1 MGP_LPJ_G0021855.1 mouse_genomes_project 15 75678002 75679916 - MGP_LPJ_P0041091 Ly6h protein_coding protein_coding MGP_LPJ_T0041092.1 MGP_LPJ_G0021855.1 mouse_genomes_project 15 75678281 75680475 - MGP_LPJ_P0041092 Ly6h protein_coding protein_coding MGP_LPJ_T0041093.1 MGP_LPJ_G0021855.1 mouse_genomes_project 15 75678468 75679891 - Ly6h protein_coding retained_intron MGP_LPJ_T0098177.1 MGP_LPJ_G0036458.1 mouse_genomes_project 15 80180088 80180212 + n-R5s40 rRNA rRNA MGP_LPJ_T0003618.1 MGP_LPJ_G0003283.1 mouse_genomes_project 15 71496369 71500042 + Gm16308 antisense antisense MGP_LPJ_T0010057.1 MGP_LPJ_G0008175.1 mouse_genomes_project 15 49559637 49559727 - Mir1907 miRNA miRNA MGP_LPJ_T0041762.1 MGP_LPJ_G0022035.1 mouse_genomes_project 15 82845991 82852965 - MGP_LPJ_P0041762 Shisa8 protein_coding protein_coding MGP_LPJ_T0042019.1 MGP_LPJ_G0022124.1 mouse_genomes_project 15 90633756 90660354 - MGP_LPJ_P0042019 Sbf1 protein_coding protein_coding MGP_LPJ_T0042020.1 MGP_LPJ_G0022124.1 mouse_genomes_project 15 90633800 90660298 - MGP_LPJ_P0042020 Sbf1 protein_coding protein_coding MGP_LPJ_T0042021.1 MGP_LPJ_G0022124.1 mouse_genomes_project 15 90633803 90660314 - MGP_LPJ_P0042021 Sbf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0042022.1 MGP_LPJ_G0022124.1 mouse_genomes_project 15 90633804 90639817 - MGP_LPJ_P0042022 Sbf1 protein_coding protein_coding MGP_LPJ_T0042023.1 MGP_LPJ_G0022124.1 mouse_genomes_project 15 90634073 90634476 - Sbf1 protein_coding retained_intron MGP_LPJ_T0042024.1 MGP_LPJ_G0022124.1 mouse_genomes_project 15 90635252 90639330 - Sbf1 protein_coding retained_intron MGP_LPJ_T0042025.1 MGP_LPJ_G0022124.1 mouse_genomes_project 15 90639520 90641171 - Sbf1 protein_coding retained_intron MGP_LPJ_T0042026.1 MGP_LPJ_G0022124.1 mouse_genomes_project 15 90644772 90645516 - Sbf1 protein_coding retained_intron MGP_LPJ_T0042027.1 MGP_LPJ_G0022124.1 mouse_genomes_project 15 90645610 90647686 - Sbf1 protein_coding retained_intron MGP_LPJ_T0042028.1 MGP_LPJ_G0022124.1 mouse_genomes_project 15 90647338 90648390 - MGP_LPJ_P0042028 Sbf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0042029.1 MGP_LPJ_G0022124.1 mouse_genomes_project 15 90648148 90650151 - Sbf1 protein_coding retained_intron MGP_LPJ_T0042030.1 MGP_LPJ_G0022124.1 mouse_genomes_project 15 90649943 90651673 - Sbf1 protein_coding retained_intron MGP_LPJ_T0042031.1 MGP_LPJ_G0022124.1 mouse_genomes_project 15 90651066 90652856 - MGP_LPJ_P0042031 Sbf1 protein_coding protein_coding MGP_LPJ_T0000972.1 MGP_LPJ_G0000900.1 mouse_genomes_project 15 67826731 67829651 - TEC TEC MGP_LPJ_T0011400.1 MGP_LPJ_G0009518.1 mouse_genomes_project 15 15442225 15442533 + Gm22895 misc_RNA misc_RNA MGP_LPJ_T0101892.1 MGP_LPJ_G0039929.1 mouse_genomes_project 15 75181899 75185663 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0040765.1 MGP_LPJ_G0021745.1 mouse_genomes_project 15 51069910 51114935 + MGP_LPJ_P0040765 Slc30a8 protein_coding protein_coding MGP_LPJ_T0040844.1 MGP_LPJ_G0021772.1 mouse_genomes_project 15 57101468 57144040 - MGP_LPJ_P0040844 Atad2 protein_coding protein_coding MGP_LPJ_T0042229.1 MGP_LPJ_G0022182.1 mouse_genomes_project 15 99762411 99769663 + MGP_LPJ_P0042229 Tmem106c protein_coding unknown_likely_coding MGP_LPJ_T0042329.1 MGP_LPJ_G0022219.1 mouse_genomes_project 15 100990923 100994714 + MGP_LPJ_P0042329 Prph protein_coding protein_coding MGP_LPJ_T0042330.1 MGP_LPJ_G0022219.1 mouse_genomes_project 15 100990923 100994714 + MGP_LPJ_P0042330 Prph protein_coding protein_coding MGP_LPJ_T0041900.1 MGP_LPJ_G0022084.1 mouse_genomes_project 15 85890568 85910051 + MGP_LPJ_P0041900 Nup50 protein_coding protein_coding MGP_LPJ_T0042053.1 MGP_LPJ_G0022129.1 mouse_genomes_project 15 90720486 90722665 - MGP_LPJ_P0042053 Sco2 protein_coding protein_coding MGP_LPJ_T0099130.1 MGP_LPJ_G0037393.1 mouse_genomes_project 15 76366457 76366562 - Gm25720 snRNA snRNA MGP_LPJ_T0041773.1 MGP_LPJ_G0022043.1 mouse_genomes_project 15 83002556 83012664 + Smdt1 protein_coding processed_transcript MGP_LPJ_T0041776.1 MGP_LPJ_G0022043.1 mouse_genomes_project 15 83004579 83012612 + Smdt1 protein_coding processed_transcript MGP_LPJ_T0041778.1 MGP_LPJ_G0022043.1 mouse_genomes_project 15 83009553 83012695 + MGP_LPJ_P0041778 Smdt1 protein_coding protein_coding MGP_LPJ_T0041779.1 MGP_LPJ_G0022043.1 mouse_genomes_project 15 83009613 83012696 + MGP_LPJ_P0041779 Smdt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0041780.1 MGP_LPJ_G0022043.1 mouse_genomes_project 15 83010819 83012474 + MGP_LPJ_P0041780 Smdt1 protein_coding protein_coding MGP_LPJ_T0041322.1 MGP_LPJ_G0021909.1 mouse_genomes_project 15 76879925 76882877 + MGP_LPJ_P0041322 Gpt protein_coding protein_coding MGP_LPJ_T0097993.1 MGP_LPJ_G0036274.1 mouse_genomes_project 15 43267523 43269199 + pseudogene pseudogene MGP_LPJ_T0010100.1 MGP_LPJ_G0008218.1 mouse_genomes_project 15 90495916 90495977 - Mir7118 miRNA miRNA MGP_LPJ_T0041447.1 MGP_LPJ_G0021956.1 mouse_genomes_project 15 79329921 79351424 + Sh3bp1 protein_coding processed_transcript MGP_LPJ_T0041448.1 MGP_LPJ_G0021956.1 mouse_genomes_project 15 79330021 79343707 + MGP_LPJ_P0041448 Sh3bp1 protein_coding protein_coding MGP_LPJ_T0041449.1 MGP_LPJ_G0021956.1 mouse_genomes_project 15 79330021 79343707 + MGP_LPJ_P0041449 Sh3bp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0041450.1 MGP_LPJ_G0021956.1 mouse_genomes_project 15 79330021 79343707 + MGP_LPJ_P0041450 Sh3bp1 protein_coding protein_coding MGP_LPJ_T0041451.1 MGP_LPJ_G0021956.1 mouse_genomes_project 15 79330021 79343707 + MGP_LPJ_P0041451 Sh3bp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0041452.1 MGP_LPJ_G0021956.1 mouse_genomes_project 15 79330156 79343710 + MGP_LPJ_P0041452 Sh3bp1 protein_coding protein_coding MGP_LPJ_T0041453.1 MGP_LPJ_G0021956.1 mouse_genomes_project 15 79345574 79351909 + MGP_LPJ_P0041453 Sh3bp1 protein_coding protein_coding MGP_LPJ_T0041543.1 MGP_LPJ_G0021977.1 mouse_genomes_project 15 79995217 80016080 - MGP_LPJ_P0041543 Ddx17 protein_coding protein_coding MGP_LPJ_T0040726.1 MGP_LPJ_G0021730.1 mouse_genomes_project 15 41862413 41904612 + MGP_LPJ_P0040726 Emc2 protein_coding protein_coding MGP_LPJ_T0041979.1 MGP_LPJ_G0022114.1 mouse_genomes_project 15 90391717 90403151 + MGP_LPJ_P0041979 Panx2 protein_coding protein_coding MGP_LPJ_T0041980.1 MGP_LPJ_G0022114.1 mouse_genomes_project 15 90391730 90404180 + MGP_LPJ_P0041980 Panx2 protein_coding protein_coding MGP_LPJ_T0041981.1 MGP_LPJ_G0022114.1 mouse_genomes_project 15 90402945 90406874 + MGP_LPJ_P0041981 Panx2 protein_coding protein_coding MGP_LPJ_T0042305.1 MGP_LPJ_G0022209.1 mouse_genomes_project 15 100641164 100669680 - MGP_LPJ_P0042305 Arf3 protein_coding protein_coding MGP_LPJ_T0042306.1 MGP_LPJ_G0022209.1 mouse_genomes_project 15 100644600 100669683 - Arf3 protein_coding processed_transcript MGP_LPJ_T0042307.1 MGP_LPJ_G0022209.1 mouse_genomes_project 15 100646136 100669461 - MGP_LPJ_P0042307 Arf3 protein_coding protein_coding MGP_LPJ_T0010050.1 MGP_LPJ_G0008168.1 mouse_genomes_project 15 34525556 34525675 - Mir8097 miRNA miRNA MGP_LPJ_T0042514.1 MGP_LPJ_G0022272.1 mouse_genomes_project 15 103475935 103482569 + MGP_LPJ_P0042514 Atg101 protein_coding protein_coding MGP_LPJ_T0040851.1 MGP_LPJ_G0021778.1 mouse_genomes_project 15 57558846 57718174 + MGP_LPJ_P0040851 Fer1l6 protein_coding protein_coding MGP_LPJ_T0040852.1 MGP_LPJ_G0021778.1 mouse_genomes_project 15 57690999 57699576 + Fer1l6 protein_coding processed_transcript MGP_LPJ_T0040853.1 MGP_LPJ_G0021778.1 mouse_genomes_project 15 57702474 57720333 + Fer1l6 protein_coding retained_intron MGP_LPJ_T0006811.1 MGP_LPJ_G0005619.1 mouse_genomes_project 15 90545199 90550687 - Gm26798 lincRNA lincRNA MGP_LPJ_T0042184.1 MGP_LPJ_G0022170.1 mouse_genomes_project 15 98279877 98356224 - MGP_LPJ_P0042184 Slc38a1 protein_coding protein_coding MGP_LPJ_T0042185.1 MGP_LPJ_G0022170.1 mouse_genomes_project 15 98279877 98355843 - MGP_LPJ_P0042185 Slc38a1 protein_coding protein_coding MGP_LPJ_T0042186.1 MGP_LPJ_G0022170.1 mouse_genomes_project 15 98279877 98356752 - MGP_LPJ_P0042186 Slc38a1 protein_coding protein_coding MGP_LPJ_T0042196.1 MGP_LPJ_G0022178.1 mouse_genomes_project 15 99521131 99545473 - MGP_LPJ_P0042196 Rapgef3 protein_coding protein_coding MGP_LPJ_T0042197.1 MGP_LPJ_G0022178.1 mouse_genomes_project 15 99521314 99545425 - MGP_LPJ_P0042197 Rapgef3 protein_coding protein_coding MGP_LPJ_T0042198.1 MGP_LPJ_G0022178.1 mouse_genomes_project 15 99521317 99545291 - MGP_LPJ_P0042198 Rapgef3 protein_coding protein_coding MGP_LPJ_T0042199.1 MGP_LPJ_G0022178.1 mouse_genomes_project 15 99521377 99544689 - MGP_LPJ_P0042199 Rapgef3 protein_coding protein_coding MGP_LPJ_T0042200.1 MGP_LPJ_G0022178.1 mouse_genomes_project 15 99521525 99545293 - MGP_LPJ_P0042200 Rapgef3 protein_coding protein_coding MGP_LPJ_T0042201.1 MGP_LPJ_G0022178.1 mouse_genomes_project 15 99521642 99545047 - MGP_LPJ_P0042201 Rapgef3 protein_coding nonsense_mediated_decay MGP_LPJ_T0042202.1 MGP_LPJ_G0022178.1 mouse_genomes_project 15 99521725 99525223 - Rapgef3 protein_coding retained_intron MGP_LPJ_T0042203.1 MGP_LPJ_G0022178.1 mouse_genomes_project 15 99522881 99545214 - Rapgef3 protein_coding retained_intron MGP_LPJ_T0042204.1 MGP_LPJ_G0022178.1 mouse_genomes_project 15 99526057 99527055 - Rapgef3 protein_coding retained_intron MGP_LPJ_T0042205.1 MGP_LPJ_G0022178.1 mouse_genomes_project 15 99526707 99535213 - Rapgef3 protein_coding retained_intron MGP_LPJ_T0042207.1 MGP_LPJ_G0022178.1 mouse_genomes_project 15 99536607 99538136 - Rapgef3 protein_coding processed_transcript MGP_LPJ_T0042208.1 MGP_LPJ_G0022178.1 mouse_genomes_project 15 99537069 99544673 - MGP_LPJ_P0042208 Rapgef3 protein_coding nonsense_mediated_decay MGP_LPJ_T0042209.1 MGP_LPJ_G0022178.1 mouse_genomes_project 15 99537074 99539589 - Rapgef3 protein_coding processed_transcript MGP_LPJ_T0042210.1 MGP_LPJ_G0022178.1 mouse_genomes_project 15 99538384 99544891 - MGP_LPJ_P0042210 Rapgef3 protein_coding protein_coding MGP_LPJ_T0042211.1 MGP_LPJ_G0022178.1 mouse_genomes_project 15 99538407 99539564 - Rapgef3 protein_coding retained_intron MGP_LPJ_T0042212.1 MGP_LPJ_G0022178.1 mouse_genomes_project 15 99544485 99545599 - MGP_LPJ_P0042212 Rapgef3 protein_coding protein_coding MGP_LPJ_T0041788.1 MGP_LPJ_G0022051.1 mouse_genomes_project 15 83404558 83406177 - MGP_LPJ_P0041788 unknown_likely_coding unknown_likely_coding MGP_LPJ_T0100406.1 MGP_LPJ_G0038669.1 mouse_genomes_project 15 99872751 99872880 + Gm25668 snoRNA snoRNA MGP_LPJ_T0042544.1 MGP_LPJ_G0022296.1 mouse_genomes_project 15 104234763 104244224 - MGP_LPJ_P0042544 Krt78 protein_coding protein_coding MGP_LPJ_T0013092.1 MGP_LPJ_G0011183.1 mouse_genomes_project 15 85106434 85106741 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010054.1 MGP_LPJ_G0008172.1 mouse_genomes_project 15 36874324 36874399 - Mir6951 miRNA miRNA MGP_LPJ_T0041662.1 MGP_LPJ_G0022008.1 mouse_genomes_project 15 81804601 81808056 + MGP_LPJ_P0041662 Mchr1 protein_coding protein_coding MGP_LPJ_T0042174.1 MGP_LPJ_G0022165.1 mouse_genomes_project 15 97446246 97449690 - MGP_LPJ_P0042174 A130051J06Rik protein_coding protein_coding MGP_LPJ_T0041444.1 MGP_LPJ_G0021953.1 mouse_genomes_project 15 79270802 79279055 + MGP_LPJ_P0041444 Cdc42ep1 protein_coding protein_coding MGP_LPJ_T0041514.1 MGP_LPJ_G0021971.1 mouse_genomes_project 15 79735718 79780216 - MGP_LPJ_P0041514 Pla2g6 protein_coding protein_coding MGP_LPJ_T0041515.1 MGP_LPJ_G0021971.1 mouse_genomes_project 15 79735718 79780164 - MGP_LPJ_P0041515 Pla2g6 protein_coding protein_coding MGP_LPJ_T0041516.1 MGP_LPJ_G0021971.1 mouse_genomes_project 15 79735718 79780191 - MGP_LPJ_P0041516 Pla2g6 protein_coding protein_coding MGP_LPJ_T0041517.1 MGP_LPJ_G0021971.1 mouse_genomes_project 15 79735718 79779952 - MGP_LPJ_P0041517 Pla2g6 protein_coding protein_coding MGP_LPJ_T0041518.1 MGP_LPJ_G0021971.1 mouse_genomes_project 15 79735722 79780241 - MGP_LPJ_P0041518 Pla2g6 protein_coding protein_coding MGP_LPJ_T0041519.1 MGP_LPJ_G0021971.1 mouse_genomes_project 15 79738592 79755114 - Pla2g6 protein_coding retained_intron MGP_LPJ_T0041520.1 MGP_LPJ_G0021971.1 mouse_genomes_project 15 79753630 79756294 - Pla2g6 protein_coding retained_intron MGP_LPJ_T0041521.1 MGP_LPJ_G0021971.1 mouse_genomes_project 15 79756249 79759376 - Pla2g6 protein_coding retained_intron MGP_LPJ_T0041522.1 MGP_LPJ_G0021971.1 mouse_genomes_project 15 79759432 79780378 - MGP_LPJ_P0041522 Pla2g6 protein_coding protein_coding MGP_LPJ_T0041523.1 MGP_LPJ_G0021971.1 mouse_genomes_project 15 79760824 79770237 - Pla2g6 protein_coding retained_intron MGP_LPJ_T0041524.1 MGP_LPJ_G0021971.1 mouse_genomes_project 15 79760892 79775556 - MGP_LPJ_P0041524 Pla2g6 protein_coding protein_coding MGP_LPJ_T0041525.1 MGP_LPJ_G0021971.1 mouse_genomes_project 15 79770095 79776478 - MGP_LPJ_P0041525 Pla2g6 protein_coding protein_coding MGP_LPJ_T0042277.1 MGP_LPJ_G0022199.1 mouse_genomes_project 15 100364079 100377602 + MGP_LPJ_P0042277 Olfr279 protein_coding protein_coding MGP_LPJ_T0042278.1 MGP_LPJ_G0022199.1 mouse_genomes_project 15 100376669 100377602 + MGP_LPJ_P0042278 Olfr279 protein_coding protein_coding MGP_LPJ_T0041982.1 MGP_LPJ_G0022115.1 mouse_genomes_project 15 90408423 90418609 + MGP_LPJ_P0041982 Trabd protein_coding protein_coding MGP_LPJ_T0041983.1 MGP_LPJ_G0022115.1 mouse_genomes_project 15 90409312 90420377 + MGP_LPJ_P0041983 Trabd protein_coding protein_coding MGP_LPJ_T0041984.1 MGP_LPJ_G0022115.1 mouse_genomes_project 15 90409371 90420371 + MGP_LPJ_P0041984 Trabd protein_coding nonsense_mediated_decay MGP_LPJ_T0041985.1 MGP_LPJ_G0022115.1 mouse_genomes_project 15 90409393 90419430 + MGP_LPJ_P0041985 Trabd protein_coding protein_coding MGP_LPJ_T0041986.1 MGP_LPJ_G0022115.1 mouse_genomes_project 15 90409423 90419433 + MGP_LPJ_P0041986 Trabd protein_coding protein_coding MGP_LPJ_T0041987.1 MGP_LPJ_G0022115.1 mouse_genomes_project 15 90415828 90420371 + Trabd protein_coding retained_intron MGP_LPJ_T0041988.1 MGP_LPJ_G0022115.1 mouse_genomes_project 15 90418008 90418924 + Trabd protein_coding retained_intron MGP_LPJ_T0017404.1 MGP_LPJ_G0015214.1 mouse_genomes_project 15 66389154 66429931 + Gm2895 processed_transcript processed_transcript MGP_LPJ_T0013047.1 MGP_LPJ_G0011138.1 mouse_genomes_project 15 5519560 5519860 - processed_pseudogene processed_pseudogene MGP_LPJ_T0041593.1 MGP_LPJ_G0021990.1 mouse_genomes_project 15 80398272 80414727 - MGP_LPJ_P0041593 Cbx7 protein_coding protein_coding MGP_LPJ_T0041594.1 MGP_LPJ_G0021990.1 mouse_genomes_project 15 80398286 80414850 - MGP_LPJ_P0041594 Cbx7 protein_coding protein_coding MGP_LPJ_T0041595.1 MGP_LPJ_G0021990.1 mouse_genomes_project 15 80398289 80414979 - Cbx7 protein_coding retained_intron MGP_LPJ_T0041596.1 MGP_LPJ_G0021990.1 mouse_genomes_project 15 80400523 80416095 - MGP_LPJ_P0041596 Cbx7 protein_coding protein_coding MGP_LPJ_T0041597.1 MGP_LPJ_G0021990.1 mouse_genomes_project 15 80400793 80453764 - MGP_LPJ_P0041597 Cbx7 protein_coding protein_coding MGP_LPJ_T0041598.1 MGP_LPJ_G0021990.1 mouse_genomes_project 15 80401296 80414727 - MGP_LPJ_P0041598 Cbx7 protein_coding protein_coding MGP_LPJ_T0041599.1 MGP_LPJ_G0021990.1 mouse_genomes_project 15 80412815 80416026 - Cbx7 protein_coding retained_intron MGP_LPJ_T0041663.1 MGP_LPJ_G0022009.1 mouse_genomes_project 15 81889705 81939588 - MGP_LPJ_P0041663 Slc25a17 protein_coding protein_coding MGP_LPJ_T0013062.1 MGP_LPJ_G0011153.1 mouse_genomes_project 15 35816640 35817113 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099117.1 MGP_LPJ_G0037380.1 mouse_genomes_project 15 52188652 52188718 + Gm27926 snRNA snRNA MGP_LPJ_T0041797.1 MGP_LPJ_G0022057.1 mouse_genomes_project 15 83915020 83932118 + Serhl protein_coding processed_transcript MGP_LPJ_T0041798.1 MGP_LPJ_G0022057.1 mouse_genomes_project 15 83918697 83932348 + MGP_LPJ_P0041798 Serhl protein_coding protein_coding MGP_LPJ_T0041799.1 MGP_LPJ_G0022057.1 mouse_genomes_project 15 83925771 83933356 + Serhl protein_coding processed_transcript MGP_LPJ_T0041800.1 MGP_LPJ_G0022057.1 mouse_genomes_project 15 83930538 83955169 + MGP_LPJ_P0041800 Serhl protein_coding protein_coding MGP_LPJ_T0041801.1 MGP_LPJ_G0022057.1 mouse_genomes_project 15 83930547 83955166 + Serhl protein_coding retained_intron MGP_LPJ_T0041802.1 MGP_LPJ_G0022057.1 mouse_genomes_project 15 83930597 83933392 + Serhl protein_coding retained_intron MGP_LPJ_T0041803.1 MGP_LPJ_G0022057.1 mouse_genomes_project 15 83930623 83933417 + Serhl protein_coding retained_intron MGP_LPJ_T0041804.1 MGP_LPJ_G0022057.1 mouse_genomes_project 15 83930628 83955169 + MGP_LPJ_P0041804 Serhl protein_coding protein_coding MGP_LPJ_T0041805.1 MGP_LPJ_G0022057.1 mouse_genomes_project 15 83930628 83932974 + MGP_LPJ_P0041805 Serhl protein_coding protein_coding MGP_LPJ_T0041806.1 MGP_LPJ_G0022057.1 mouse_genomes_project 15 83930678 83954791 + MGP_LPJ_P0041806 Serhl protein_coding protein_coding MGP_LPJ_T0041807.1 MGP_LPJ_G0022057.1 mouse_genomes_project 15 83931915 83933552 + Serhl protein_coding retained_intron MGP_LPJ_T0041808.1 MGP_LPJ_G0022057.1 mouse_genomes_project 15 83934043 83954270 + Serhl protein_coding retained_intron MGP_LPJ_T0041809.1 MGP_LPJ_G0022057.1 mouse_genomes_project 15 83934265 83938689 + Serhl protein_coding retained_intron MGP_LPJ_T0041810.1 MGP_LPJ_G0022057.1 mouse_genomes_project 15 83934267 83936139 + Serhl protein_coding retained_intron MGP_LPJ_T0041811.1 MGP_LPJ_G0022057.1 mouse_genomes_project 15 83934707 83953016 + MGP_LPJ_P0041811 Serhl protein_coding nonsense_mediated_decay MGP_LPJ_T0040545.1 MGP_LPJ_G0021662.1 mouse_genomes_project 15 25670566 25987118 - MGP_LPJ_P0040545 Trio protein_coding protein_coding MGP_LPJ_T0013104.1 MGP_LPJ_G0011195.1 mouse_genomes_project 15 106008146 106009574 - processed_pseudogene processed_pseudogene MGP_LPJ_T0042332.1 MGP_LPJ_G0022221.1 mouse_genomes_project 15 101023385 101026512 - MGP_LPJ_P0042332 C1ql4 protein_coding protein_coding MGP_LPJ_T0041727.1 MGP_LPJ_G0022026.1 mouse_genomes_project 15 82554708 82569968 + MGP_LPJ_P0041727 Csdc2 protein_coding protein_coding MGP_LPJ_T0041728.1 MGP_LPJ_G0022026.1 mouse_genomes_project 15 82554931 82565896 + MGP_LPJ_P0041728 Csdc2 protein_coding protein_coding MGP_LPJ_T0041729.1 MGP_LPJ_G0022026.1 mouse_genomes_project 15 82564757 82565914 + Csdc2 protein_coding processed_transcript MGP_LPJ_T0041730.1 MGP_LPJ_G0022026.1 mouse_genomes_project 15 82565987 82569961 + Csdc2 protein_coding retained_intron MGP_LPJ_T0101894.1 MGP_LPJ_G0039931.1 mouse_genomes_project 15 75238224 75240432 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0040319.1 MGP_LPJ_G0021598.1 mouse_genomes_project 15 2028021 2068608 + MGP_LPJ_P0040319 Ttc33 protein_coding protein_coding MGP_LPJ_T0040320.1 MGP_LPJ_G0021598.1 mouse_genomes_project 15 2028430 2065496 + MGP_LPJ_P0040320 Ttc33 protein_coding protein_coding MGP_LPJ_T0040321.1 MGP_LPJ_G0021598.1 mouse_genomes_project 15 2032072 2056732 + MGP_LPJ_P0040321 Ttc33 protein_coding protein_coding MGP_LPJ_T0010046.1 MGP_LPJ_G0008164.1 mouse_genomes_project 15 25507931 25507996 + Mir7117 miRNA miRNA MGP_LPJ_T0042546.1 MGP_LPJ_G0022298.1 mouse_genomes_project 15 104327738 104333426 + MGP_LPJ_P0042546 Krt18 protein_coding protein_coding MGP_LPJ_T0010040.1 MGP_LPJ_G0008158.1 mouse_genomes_project 15 2734694 2734808 + Gm27760 miRNA miRNA MGP_LPJ_T0041057.1 MGP_LPJ_G0021844.1 mouse_genomes_project 15 74699818 74708587 - MGP_LPJ_P0041057 protein_coding protein_coding MGP_LPJ_T0010060.1 MGP_LPJ_G0008178.1 mouse_genomes_project 15 67825845 67825941 - Mir30b miRNA miRNA MGP_LPJ_T0100376.1 MGP_LPJ_G0038639.1 mouse_genomes_project 15 29286440 29286574 - Gm26416 snoRNA snoRNA MGP_LPJ_T0042542.1 MGP_LPJ_G0022294.1 mouse_genomes_project 15 104206429 104212656 - MGP_LPJ_P0042542 Krt4 protein_coding protein_coding MGP_LPJ_T0013103.1 MGP_LPJ_G0011194.1 mouse_genomes_project 15 101932175 101932445 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011412.1 MGP_LPJ_G0009530.1 mouse_genomes_project 15 94746251 94746589 + Gm24447 misc_RNA misc_RNA MGP_LPJ_T0040943.1 MGP_LPJ_G0021810.1 mouse_genomes_project 15 66194716 66248441 - MGP_LPJ_P0040943 Sla protein_coding protein_coding MGP_LPJ_T0040944.1 MGP_LPJ_G0021810.1 mouse_genomes_project 15 66194761 66228373 - MGP_LPJ_P0040944 Sla protein_coding protein_coding MGP_LPJ_T0040945.1 MGP_LPJ_G0021810.1 mouse_genomes_project 15 66195975 66217603 - MGP_LPJ_P0040945 Sla protein_coding protein_coding MGP_LPJ_T0040946.1 MGP_LPJ_G0021810.1 mouse_genomes_project 15 66196439 66248624 - MGP_LPJ_P0040946 Sla protein_coding protein_coding MGP_LPJ_T0040947.1 MGP_LPJ_G0021810.1 mouse_genomes_project 15 66199617 66219759 - Sla protein_coding retained_intron MGP_LPJ_T0040343.1 MGP_LPJ_G0021602.1 mouse_genomes_project 15 3468357 3572083 + MGP_LPJ_P0040343 Fyb protein_coding protein_coding MGP_LPJ_T0040344.1 MGP_LPJ_G0021602.1 mouse_genomes_project 15 3485027 3526283 + Fyb protein_coding retained_intron MGP_LPJ_T0040345.1 MGP_LPJ_G0021602.1 mouse_genomes_project 15 3490894 3541827 + MGP_LPJ_P0040345 Fyb protein_coding protein_coding MGP_LPJ_T0040346.1 MGP_LPJ_G0021602.1 mouse_genomes_project 15 3525268 3539413 + Fyb protein_coding retained_intron MGP_LPJ_T0040347.1 MGP_LPJ_G0021602.1 mouse_genomes_project 15 3551329 3569787 + MGP_LPJ_P0040347 Fyb protein_coding protein_coding MGP_LPJ_T0040348.1 MGP_LPJ_G0021602.1 mouse_genomes_project 15 3553702 3559500 + Fyb protein_coding retained_intron MGP_LPJ_T0040349.1 MGP_LPJ_G0021602.1 mouse_genomes_project 15 3569315 3572162 + Fyb protein_coding retained_intron MGP_LPJ_T0041480.1 MGP_LPJ_G0021964.1 mouse_genomes_project 15 79554580 79582354 + MGP_LPJ_P0041480 Micall1 protein_coding protein_coding MGP_LPJ_T0041718.1 MGP_LPJ_G0022023.1 mouse_genomes_project 15 82483612 82490150 - MGP_LPJ_P0041718 Phf5a protein_coding protein_coding MGP_LPJ_T0041719.1 MGP_LPJ_G0022023.1 mouse_genomes_project 15 82483896 82489904 - Phf5a protein_coding processed_transcript MGP_LPJ_T0041155.1 MGP_LPJ_G0021875.1 mouse_genomes_project 15 76191976 76214573 - MGP_LPJ_P0041155 Scrib protein_coding protein_coding MGP_LPJ_T0041156.1 MGP_LPJ_G0021875.1 mouse_genomes_project 15 76191976 76214603 - MGP_LPJ_P0041156 Scrib protein_coding protein_coding MGP_LPJ_T0041157.1 MGP_LPJ_G0021875.1 mouse_genomes_project 15 76191976 76207538 - MGP_LPJ_P0041157 Scrib protein_coding protein_coding MGP_LPJ_T0041158.1 MGP_LPJ_G0021875.1 mouse_genomes_project 15 76191976 76214573 - MGP_LPJ_P0041158 Scrib protein_coding protein_coding MGP_LPJ_T0041159.1 MGP_LPJ_G0021875.1 mouse_genomes_project 15 76193758 76195605 - MGP_LPJ_P0041159 Scrib protein_coding protein_coding MGP_LPJ_T0041160.1 MGP_LPJ_G0021875.1 mouse_genomes_project 15 76194021 76195605 - MGP_LPJ_P0041160 Scrib protein_coding protein_coding MGP_LPJ_T0040318.1 MGP_LPJ_G0021597.1 mouse_genomes_project 15 1984052 2024200 + MGP_LPJ_P0040318 Prkaa1 protein_coding protein_coding MGP_LPJ_T0003624.1 MGP_LPJ_G0003288.1 mouse_genomes_project 15 79613913 79665432 + Gm10863 antisense antisense MGP_LPJ_T0003625.1 MGP_LPJ_G0003288.1 mouse_genomes_project 15 79613930 79665217 + Gm10863 antisense antisense MGP_LPJ_T0003626.1 MGP_LPJ_G0003288.1 mouse_genomes_project 15 79613938 79665546 + Gm10863 antisense antisense MGP_LPJ_T0003627.1 MGP_LPJ_G0003288.1 mouse_genomes_project 15 79613938 79676522 + Gm10863 antisense antisense MGP_LPJ_T0003628.1 MGP_LPJ_G0003288.1 mouse_genomes_project 15 79658393 79666432 + Gm10863 antisense antisense MGP_LPJ_T0000973.1 MGP_LPJ_G0000901.1 mouse_genomes_project 15 82180008 82180863 - TEC TEC MGP_LPJ_T0003650.1 MGP_LPJ_G0003307.1 mouse_genomes_project 15 102718021 102724000 + Gm20680 antisense antisense MGP_LPJ_T0041871.1 MGP_LPJ_G0022076.1 mouse_genomes_project 15 85160643 85253310 + MGP_LPJ_P0041871 Parvb protein_coding protein_coding MGP_LPJ_T0041872.1 MGP_LPJ_G0022076.1 mouse_genomes_project 15 85160666 85202578 + MGP_LPJ_P0041872 Parvb protein_coding nonsense_mediated_decay MGP_LPJ_T0041873.1 MGP_LPJ_G0022076.1 mouse_genomes_project 15 85188398 85222194 + Parvb protein_coding processed_transcript MGP_LPJ_T0040832.1 MGP_LPJ_G0021770.1 mouse_genomes_project 15 57029093 57082817 - MGP_LPJ_P0040832 Gm29394 protein_coding protein_coding MGP_LPJ_T0040835.1 MGP_LPJ_G0021770.1 mouse_genomes_project 15 57031809 57082599 - MGP_LPJ_P0040835 Gm29394 protein_coding protein_coding MGP_LPJ_T0040839.1 MGP_LPJ_G0021770.1 mouse_genomes_project 15 57052789 57082575 - MGP_LPJ_P0040839 Gm29394 protein_coding protein_coding MGP_LPJ_T0040840.1 MGP_LPJ_G0021770.1 mouse_genomes_project 15 57052908 57082598 - MGP_LPJ_P0040840 Gm29394 protein_coding protein_coding MGP_LPJ_T0041222.1 MGP_LPJ_G0021888.1 mouse_genomes_project 15 76508528 76512600 - Sharpin protein_coding retained_intron MGP_LPJ_T0041223.1 MGP_LPJ_G0021888.1 mouse_genomes_project 15 76508528 76512601 - MGP_LPJ_P0041223 Sharpin protein_coding protein_coding MGP_LPJ_T0041224.1 MGP_LPJ_G0021888.1 mouse_genomes_project 15 76508529 76512537 - Sharpin protein_coding retained_intron MGP_LPJ_T0041225.1 MGP_LPJ_G0021888.1 mouse_genomes_project 15 76508529 76512565 - Sharpin protein_coding retained_intron MGP_LPJ_T0041226.1 MGP_LPJ_G0021888.1 mouse_genomes_project 15 76508542 76509174 - MGP_LPJ_P0041226 Sharpin protein_coding protein_coding MGP_LPJ_T0041227.1 MGP_LPJ_G0021888.1 mouse_genomes_project 15 76508606 76509685 - Sharpin protein_coding retained_intron MGP_LPJ_T0041228.1 MGP_LPJ_G0021888.1 mouse_genomes_project 15 76509118 76512240 - MGP_LPJ_P0041228 Sharpin protein_coding nonsense_mediated_decay MGP_LPJ_T0041229.1 MGP_LPJ_G0021888.1 mouse_genomes_project 15 76509338 76512181 - Sharpin protein_coding retained_intron MGP_LPJ_T0041230.1 MGP_LPJ_G0021888.1 mouse_genomes_project 15 76509386 76512172 - Sharpin protein_coding retained_intron MGP_LPJ_T0041231.1 MGP_LPJ_G0021888.1 mouse_genomes_project 15 76510101 76512202 - Sharpin protein_coding retained_intron MGP_LPJ_T0040785.1 MGP_LPJ_G0021756.1 mouse_genomes_project 15 53944356 53958755 - MGP_LPJ_P0040785 Dscc1 protein_coding protein_coding MGP_LPJ_T0040786.1 MGP_LPJ_G0021756.1 mouse_genomes_project 15 53944359 53958744 - MGP_LPJ_P0040786 Dscc1 protein_coding protein_coding MGP_LPJ_T0040787.1 MGP_LPJ_G0021756.1 mouse_genomes_project 15 53951976 53956027 - Dscc1 protein_coding retained_intron MGP_LPJ_T0040645.1 MGP_LPJ_G0021701.1 mouse_genomes_project 15 34942104 34942498 - MGP_LPJ_P0040645 Gm8186 protein_coding protein_coding MGP_LPJ_T0011418.1 MGP_LPJ_G0009536.1 mouse_genomes_project 15 105320237 105320412 + Gm28011 misc_RNA misc_RNA MGP_LPJ_T0042170.1 MGP_LPJ_G0022162.1 mouse_genomes_project 15 96221284 96718278 + MGP_LPJ_P0042170 Tmem117 protein_coding protein_coding MGP_LPJ_T0100396.1 MGP_LPJ_G0038659.1 mouse_genomes_project 15 68979507 68979639 - Gm24232 snoRNA snoRNA MGP_LPJ_T0006805.1 MGP_LPJ_G0005616.1 mouse_genomes_project 15 84226687 84237062 - 1700001L05Rik lincRNA lincRNA MGP_LPJ_T0006806.1 MGP_LPJ_G0005616.1 mouse_genomes_project 15 84226695 84236791 - 1700001L05Rik lincRNA lincRNA MGP_LPJ_T0006807.1 MGP_LPJ_G0005616.1 mouse_genomes_project 15 84226721 84237057 - 1700001L05Rik lincRNA lincRNA MGP_LPJ_T0006808.1 MGP_LPJ_G0005616.1 mouse_genomes_project 15 84227779 84234922 - 1700001L05Rik lincRNA lincRNA MGP_LPJ_T0041916.1 MGP_LPJ_G0022094.1 mouse_genomes_project 15 86805306 86849900 + Ppara protein_coding processed_transcript MGP_LPJ_T0041917.1 MGP_LPJ_G0022094.1 mouse_genomes_project 15 86805887 86876628 + MGP_LPJ_P0041917 Ppara protein_coding protein_coding MGP_LPJ_T0041918.1 MGP_LPJ_G0022094.1 mouse_genomes_project 15 86805962 86849995 + Ppara protein_coding processed_transcript MGP_LPJ_T0041919.1 MGP_LPJ_G0022094.1 mouse_genomes_project 15 86806099 86877284 + MGP_LPJ_P0041919 Ppara protein_coding protein_coding MGP_LPJ_T0041920.1 MGP_LPJ_G0022094.1 mouse_genomes_project 15 86806454 86876213 + MGP_LPJ_P0041920 Ppara protein_coding protein_coding MGP_LPJ_T0041921.1 MGP_LPJ_G0022094.1 mouse_genomes_project 15 86842566 86850035 + Ppara protein_coding processed_transcript MGP_LPJ_T0042338.1 MGP_LPJ_G0022226.1 mouse_genomes_project 15 101244693 101266407 - MGP_LPJ_P0042338 Fam186b protein_coding protein_coding MGP_LPJ_T0041781.1 MGP_LPJ_G0022044.1 mouse_genomes_project 15 83013740 83018213 - MGP_LPJ_P0041781 Ndufa6 protein_coding protein_coding MGP_LPJ_T0003614.1 MGP_LPJ_G0003279.1 mouse_genomes_project 15 65440939 65468999 + antisense antisense MGP_LPJ_T0003605.1 MGP_LPJ_G0003272.1 mouse_genomes_project 15 3509633 3562716 - Gm2245 antisense antisense MGP_LPJ_T0040452.1 MGP_LPJ_G0021629.1 mouse_genomes_project 15 7607959 7767114 - MGP_LPJ_P0040452 Rai14 protein_coding protein_coding MGP_LPJ_T0040453.1 MGP_LPJ_G0021629.1 mouse_genomes_project 15 7607959 7769397 - MGP_LPJ_P0040453 Rai14 protein_coding protein_coding MGP_LPJ_T0040519.1 MGP_LPJ_G0021654.1 mouse_genomes_project 15 23490566 23681581 + MGP_LPJ_P0040519 Myo10 protein_coding protein_coding MGP_LPJ_T0040520.1 MGP_LPJ_G0021654.1 mouse_genomes_project 15 23490584 23644052 + MGP_LPJ_P0040520 Myo10 protein_coding protein_coding MGP_LPJ_T0040521.1 MGP_LPJ_G0021654.1 mouse_genomes_project 15 23490590 23564831 + Myo10 protein_coding retained_intron MGP_LPJ_T0040522.1 MGP_LPJ_G0021654.1 mouse_genomes_project 15 23564442 23586735 + Myo10 protein_coding processed_transcript MGP_LPJ_T0040523.1 MGP_LPJ_G0021654.1 mouse_genomes_project 15 23576774 23586786 + Myo10 protein_coding retained_intron MGP_LPJ_T0040524.1 MGP_LPJ_G0021654.1 mouse_genomes_project 15 23605403 23645485 + MGP_LPJ_P0040524 Myo10 protein_coding protein_coding MGP_LPJ_T0040525.1 MGP_LPJ_G0021654.1 mouse_genomes_project 15 23617664 23681579 + MGP_LPJ_P0040525 Myo10 protein_coding protein_coding MGP_LPJ_T0040526.1 MGP_LPJ_G0021654.1 mouse_genomes_project 15 23617733 23644062 + MGP_LPJ_P0040526 Myo10 protein_coding protein_coding MGP_LPJ_T0040527.1 MGP_LPJ_G0021654.1 mouse_genomes_project 15 23623156 23640624 + MGP_LPJ_P0040527 Myo10 protein_coding protein_coding MGP_LPJ_T0040528.1 MGP_LPJ_G0021654.1 mouse_genomes_project 15 23623176 23644700 + MGP_LPJ_P0040528 Myo10 protein_coding protein_coding MGP_LPJ_T0040529.1 MGP_LPJ_G0021654.1 mouse_genomes_project 15 23633087 23640873 + MGP_LPJ_P0040529 Myo10 protein_coding protein_coding MGP_LPJ_T0040530.1 MGP_LPJ_G0021654.1 mouse_genomes_project 15 23638514 23645348 + MGP_LPJ_P0040530 Myo10 protein_coding protein_coding MGP_LPJ_T0040531.1 MGP_LPJ_G0021654.1 mouse_genomes_project 15 23644480 23645659 + Myo10 protein_coding retained_intron MGP_LPJ_T0042660.1 MGP_LPJ_G0022326.1 mouse_genomes_project 15 105290986 105298694 + MGP_LPJ_P0042660 Hoxc13 protein_coding protein_coding MGP_LPJ_T0040890.1 MGP_LPJ_G0021798.1 mouse_genomes_project 15 63436249 63663070 - MGP_LPJ_P0040890 Asap1 protein_coding protein_coding MGP_LPJ_T0040891.1 MGP_LPJ_G0021798.1 mouse_genomes_project 15 63437928 63663036 - MGP_LPJ_P0040891 Asap1 protein_coding protein_coding MGP_LPJ_T0040892.1 MGP_LPJ_G0021798.1 mouse_genomes_project 15 63437931 63732952 - MGP_LPJ_P0040892 Asap1 protein_coding protein_coding MGP_LPJ_T0040893.1 MGP_LPJ_G0021798.1 mouse_genomes_project 15 63437933 63732789 - MGP_LPJ_P0040893 Asap1 protein_coding protein_coding MGP_LPJ_T0040894.1 MGP_LPJ_G0021798.1 mouse_genomes_project 15 63437933 63732952 - MGP_LPJ_P0040894 Asap1 protein_coding protein_coding MGP_LPJ_T0040895.1 MGP_LPJ_G0021798.1 mouse_genomes_project 15 63437933 63732952 - MGP_LPJ_P0040895 Asap1 protein_coding protein_coding MGP_LPJ_T0040896.1 MGP_LPJ_G0021798.1 mouse_genomes_project 15 63437933 63732952 - MGP_LPJ_P0040896 Asap1 protein_coding protein_coding MGP_LPJ_T0040897.1 MGP_LPJ_G0021798.1 mouse_genomes_project 15 63437933 63699940 - MGP_LPJ_P0040897 Asap1 protein_coding protein_coding MGP_LPJ_T0040898.1 MGP_LPJ_G0021798.1 mouse_genomes_project 15 63438011 63732770 - MGP_LPJ_P0040898 Asap1 protein_coding protein_coding MGP_LPJ_T0040899.1 MGP_LPJ_G0021798.1 mouse_genomes_project 15 63438839 63699940 - MGP_LPJ_P0040899 Asap1 protein_coding protein_coding MGP_LPJ_T0040900.1 MGP_LPJ_G0021798.1 mouse_genomes_project 15 63438839 63699940 - MGP_LPJ_P0040900 Asap1 protein_coding protein_coding MGP_LPJ_T0040901.1 MGP_LPJ_G0021798.1 mouse_genomes_project 15 63444237 63452549 - Asap1 protein_coding retained_intron MGP_LPJ_T0040902.1 MGP_LPJ_G0021798.1 mouse_genomes_project 15 63470036 63472769 - Asap1 protein_coding processed_transcript MGP_LPJ_T0040903.1 MGP_LPJ_G0021798.1 mouse_genomes_project 15 63470089 63473805 - Asap1 protein_coding retained_intron MGP_LPJ_T0040904.1 MGP_LPJ_G0021798.1 mouse_genomes_project 15 63509181 63558961 - MGP_LPJ_P0040904 Asap1 protein_coding protein_coding MGP_LPJ_T0040905.1 MGP_LPJ_G0021798.1 mouse_genomes_project 15 63523425 63732765 - Asap1 protein_coding processed_transcript MGP_LPJ_T0040906.1 MGP_LPJ_G0021798.1 mouse_genomes_project 15 63541512 63663070 - Asap1 protein_coding retained_intron MGP_LPJ_T0040907.1 MGP_LPJ_G0021798.1 mouse_genomes_project 15 63542006 63662086 - Asap1 protein_coding processed_transcript MGP_LPJ_T0040908.1 MGP_LPJ_G0021798.1 mouse_genomes_project 15 63558966 63663927 - MGP_LPJ_P0040908 Asap1 protein_coding protein_coding MGP_LPJ_T0040616.1 MGP_LPJ_G0021691.1 mouse_genomes_project 15 33641469 34205708 + MGP_LPJ_P0040616 Vps13b protein_coding protein_coding MGP_LPJ_T0010094.1 MGP_LPJ_G0008212.1 mouse_genomes_project 15 85090320 85090428 + Mir6392 miRNA miRNA MGP_LPJ_T0040776.1 MGP_LPJ_G0021750.1 mouse_genomes_project 15 53100484 53128126 - MGP_LPJ_P0040776 Tnfrsf11b protein_coding protein_coding MGP_LPJ_T0099112.1 MGP_LPJ_G0037375.1 mouse_genomes_project 15 45404484 45404546 - Gm23665 snRNA snRNA MGP_LPJ_T0042173.1 MGP_LPJ_G0022164.1 mouse_genomes_project 15 97276739 97311327 - MGP_LPJ_P0042173 Dbx2 protein_coding protein_coding MGP_LPJ_T0041375.1 MGP_LPJ_G0021927.1 mouse_genomes_project 15 77822292 77833165 + MGP_LPJ_P0041375 Apol10b protein_coding protein_coding MGP_LPJ_T0040508.1 MGP_LPJ_G0021648.1 mouse_genomes_project 15 18294366 18295898 - MGP_LPJ_P0040508 Acot10 protein_coding protein_coding MGP_LPJ_T0006822.1 MGP_LPJ_G0005625.1 mouse_genomes_project 15 100718760 100727592 + B130046B21Rik lincRNA lincRNA MGP_LPJ_T0041481.1 MGP_LPJ_G0021965.1 mouse_genomes_project 15 79574797 79580365 - 1700088E04Rik protein_coding processed_transcript MGP_LPJ_T0041482.1 MGP_LPJ_G0021965.1 mouse_genomes_project 15 79580103 79586691 - MGP_LPJ_P0041482 1700088E04Rik protein_coding protein_coding MGP_LPJ_T0041483.1 MGP_LPJ_G0021965.1 mouse_genomes_project 15 79580103 79586639 - MGP_LPJ_P0041483 1700088E04Rik protein_coding protein_coding MGP_LPJ_T0041484.1 MGP_LPJ_G0021965.1 mouse_genomes_project 15 79580109 79586705 - MGP_LPJ_P0041484 1700088E04Rik protein_coding protein_coding MGP_LPJ_T0041485.1 MGP_LPJ_G0021965.1 mouse_genomes_project 15 79580440 79586682 - MGP_LPJ_P0041485 1700088E04Rik protein_coding protein_coding MGP_LPJ_T0041486.1 MGP_LPJ_G0021965.1 mouse_genomes_project 15 79580457 79582170 - 1700088E04Rik protein_coding processed_transcript MGP_LPJ_T0041487.1 MGP_LPJ_G0021965.1 mouse_genomes_project 15 79580465 79586686 - MGP_LPJ_P0041487 1700088E04Rik protein_coding protein_coding MGP_LPJ_T0041488.1 MGP_LPJ_G0021965.1 mouse_genomes_project 15 79580504 79586657 - MGP_LPJ_P0041488 1700088E04Rik protein_coding protein_coding MGP_LPJ_T0041489.1 MGP_LPJ_G0021965.1 mouse_genomes_project 15 79580530 79586634 - MGP_LPJ_P0041489 1700088E04Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0041490.1 MGP_LPJ_G0021965.1 mouse_genomes_project 15 79582588 79586655 - MGP_LPJ_P0041490 1700088E04Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0041491.1 MGP_LPJ_G0021965.1 mouse_genomes_project 15 79582876 79584721 - MGP_LPJ_P0041491 1700088E04Rik protein_coding protein_coding MGP_LPJ_T0041492.1 MGP_LPJ_G0021965.1 mouse_genomes_project 15 79582879 79586705 - MGP_LPJ_P0041492 1700088E04Rik protein_coding protein_coding MGP_LPJ_T0041493.1 MGP_LPJ_G0021965.1 mouse_genomes_project 15 79582881 79586430 - MGP_LPJ_P0041493 1700088E04Rik protein_coding protein_coding MGP_LPJ_T0040878.1 MGP_LPJ_G0021794.1 mouse_genomes_project 15 61217449 61222487 + MGP_LPJ_P0040878 Myc protein_coding protein_coding MGP_LPJ_T0040879.1 MGP_LPJ_G0021794.1 mouse_genomes_project 15 61217499 61222485 + MGP_LPJ_P0040879 Myc protein_coding protein_coding MGP_LPJ_T0040880.1 MGP_LPJ_G0021794.1 mouse_genomes_project 15 61217672 61222509 + MGP_LPJ_P0040880 Myc protein_coding protein_coding MGP_LPJ_T0040881.1 MGP_LPJ_G0021794.1 mouse_genomes_project 15 61217730 61222180 + MGP_LPJ_P0040881 Myc protein_coding protein_coding MGP_LPJ_T0040882.1 MGP_LPJ_G0021794.1 mouse_genomes_project 15 61218030 61222021 + MGP_LPJ_P0040882 Myc protein_coding protein_coding MGP_LPJ_T0040883.1 MGP_LPJ_G0021794.1 mouse_genomes_project 15 61219142 61219726 + MGP_LPJ_P0040883 Myc protein_coding protein_coding MGP_LPJ_T0040884.1 MGP_LPJ_G0021794.1 mouse_genomes_project 15 61219530 61222366 + MGP_LPJ_P0040884 Myc protein_coding protein_coding MGP_LPJ_T0042256.1 MGP_LPJ_G0022189.1 mouse_genomes_project 15 100024309 100025965 - Olfr287 protein_coding processed_transcript MGP_LPJ_T0042257.1 MGP_LPJ_G0022189.1 mouse_genomes_project 15 100024309 100038503 - MGP_LPJ_P0042257 Olfr287 protein_coding protein_coding MGP_LPJ_T0042258.1 MGP_LPJ_G0022189.1 mouse_genomes_project 15 100026278 100038401 - Olfr287 protein_coding processed_transcript MGP_LPJ_T0042548.1 MGP_LPJ_G0022300.1 mouse_genomes_project 15 104408494 104421908 + MGP_LPJ_P0042548 Tns2 protein_coding protein_coding MGP_LPJ_T0042549.1 MGP_LPJ_G0022300.1 mouse_genomes_project 15 104408494 104421898 + MGP_LPJ_P0042549 Tns2 protein_coding protein_coding MGP_LPJ_T0041195.1 MGP_LPJ_G0021882.1 mouse_genomes_project 15 76424879 76451772 + MGP_LPJ_P0041195 Spatc1 protein_coding protein_coding MGP_LPJ_T0003631.1 MGP_LPJ_G0003291.1 mouse_genomes_project 15 83701026 83710533 + Gm20324 antisense antisense MGP_LPJ_T0041726.1 MGP_LPJ_G0022025.1 mouse_genomes_project 15 82533013 82544221 - MGP_LPJ_P0041726 Polr3h protein_coding protein_coding MGP_LPJ_T0042476.1 MGP_LPJ_G0022265.1 mouse_genomes_project 15 103018425 103094409 + MGP_LPJ_P0042476 Scn8a protein_coding protein_coding MGP_LPJ_T0042477.1 MGP_LPJ_G0022265.1 mouse_genomes_project 15 103018425 103094409 + MGP_LPJ_P0042477 Scn8a protein_coding protein_coding MGP_LPJ_T0042478.1 MGP_LPJ_G0022265.1 mouse_genomes_project 15 103019212 103171277 + MGP_LPJ_P0042478 Scn8a protein_coding protein_coding MGP_LPJ_T0042479.1 MGP_LPJ_G0022265.1 mouse_genomes_project 15 103019228 103094409 + MGP_LPJ_P0042479 Scn8a protein_coding protein_coding MGP_LPJ_T0042480.1 MGP_LPJ_G0022265.1 mouse_genomes_project 15 103019250 103211496 + MGP_LPJ_P0042480 Scn8a protein_coding protein_coding MGP_LPJ_T0042481.1 MGP_LPJ_G0022265.1 mouse_genomes_project 15 103021568 103211505 + MGP_LPJ_P0042481 Scn8a protein_coding protein_coding MGP_LPJ_T0042482.1 MGP_LPJ_G0022265.1 mouse_genomes_project 15 103021609 103207266 + MGP_LPJ_P0042482 Scn8a protein_coding protein_coding MGP_LPJ_T0042483.1 MGP_LPJ_G0022265.1 mouse_genomes_project 15 103021616 103207183 + MGP_LPJ_P0042483 Scn8a protein_coding protein_coding MGP_LPJ_T0042484.1 MGP_LPJ_G0022265.1 mouse_genomes_project 15 103022111 103094409 + MGP_LPJ_P0042484 Scn8a protein_coding protein_coding MGP_LPJ_T0042485.1 MGP_LPJ_G0022265.1 mouse_genomes_project 15 103091504 103098850 + MGP_LPJ_P0042485 Scn8a protein_coding protein_coding MGP_LPJ_T0042486.1 MGP_LPJ_G0022265.1 mouse_genomes_project 15 103094352 103211496 + MGP_LPJ_P0042486 Scn8a protein_coding protein_coding MGP_LPJ_T0042487.1 MGP_LPJ_G0022265.1 mouse_genomes_project 15 103094387 103098473 + MGP_LPJ_P0042487 Scn8a protein_coding protein_coding MGP_LPJ_T0042488.1 MGP_LPJ_G0022265.1 mouse_genomes_project 15 103094406 103206258 + MGP_LPJ_P0042488 Scn8a protein_coding protein_coding MGP_LPJ_T0042489.1 MGP_LPJ_G0022265.1 mouse_genomes_project 15 103116185 103121964 + MGP_LPJ_P0042489 Scn8a protein_coding protein_coding MGP_LPJ_T0042490.1 MGP_LPJ_G0022265.1 mouse_genomes_project 15 103117597 103120287 + Scn8a protein_coding retained_intron MGP_LPJ_T0042491.1 MGP_LPJ_G0022265.1 mouse_genomes_project 15 103117632 103120134 + Scn8a protein_coding retained_intron MGP_LPJ_T0042492.1 MGP_LPJ_G0022265.1 mouse_genomes_project 15 103117725 103211489 + MGP_LPJ_P0042492 Scn8a protein_coding unknown_likely_coding MGP_LPJ_T0042493.1 MGP_LPJ_G0022265.1 mouse_genomes_project 15 103117761 103162332 + MGP_LPJ_P0042493 Scn8a protein_coding protein_coding MGP_LPJ_T0042494.1 MGP_LPJ_G0022265.1 mouse_genomes_project 15 103129009 103130650 + Scn8a protein_coding retained_intron MGP_LPJ_T0042495.1 MGP_LPJ_G0022265.1 mouse_genomes_project 15 103130534 103135143 + Scn8a protein_coding retained_intron MGP_LPJ_T0042496.1 MGP_LPJ_G0022265.1 mouse_genomes_project 15 103181522 103195356 + Scn8a protein_coding processed_transcript MGP_LPJ_T0041833.1 MGP_LPJ_G0022064.1 mouse_genomes_project 15 84364504 84391030 - MGP_LPJ_P0041833 Ttll1 protein_coding protein_coding MGP_LPJ_T0041834.1 MGP_LPJ_G0022064.1 mouse_genomes_project 15 84382278 84390953 - MGP_LPJ_P0041834 Ttll1 protein_coding protein_coding MGP_LPJ_T0041835.1 MGP_LPJ_G0022064.1 mouse_genomes_project 15 84385359 84391043 - Ttll1 protein_coding processed_transcript MGP_LPJ_T0042673.1 MGP_LPJ_G0022334.1 mouse_genomes_project 15 105390859 105409447 + MGP_LPJ_P0042673 Hoxc4 protein_coding protein_coding MGP_LPJ_T0042674.1 MGP_LPJ_G0022334.1 mouse_genomes_project 15 105407436 105409894 + MGP_LPJ_P0042674 Hoxc4 protein_coding protein_coding MGP_LPJ_T0013095.1 MGP_LPJ_G0011186.1 mouse_genomes_project 15 91974988 91975471 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006756.1 MGP_LPJ_G0005584.1 mouse_genomes_project 15 7769595 7845593 + 4930556M19Rik lincRNA lincRNA MGP_LPJ_T0041267.1 MGP_LPJ_G0021895.1 mouse_genomes_project 15 76630524 76632555 + MGP_LPJ_P0041267 Scx protein_coding protein_coding MGP_LPJ_T0040638.1 MGP_LPJ_G0021700.1 mouse_genomes_project 15 34903402 34916582 - MGP_LPJ_P0040638 Pabpc1 protein_coding protein_coding MGP_LPJ_T0040639.1 MGP_LPJ_G0021700.1 mouse_genomes_project 15 34903649 34905762 - MGP_LPJ_P0040639 Pabpc1 protein_coding protein_coding MGP_LPJ_T0040640.1 MGP_LPJ_G0021700.1 mouse_genomes_project 15 34903766 34906055 - Pabpc1 protein_coding processed_transcript MGP_LPJ_T0040641.1 MGP_LPJ_G0021700.1 mouse_genomes_project 15 34903766 34905169 - Pabpc1 protein_coding processed_transcript MGP_LPJ_T0040642.1 MGP_LPJ_G0021700.1 mouse_genomes_project 15 34903943 34905479 - Pabpc1 protein_coding processed_transcript MGP_LPJ_T0040643.1 MGP_LPJ_G0021700.1 mouse_genomes_project 15 34906043 34910093 - Pabpc1 protein_coding processed_transcript MGP_LPJ_T0040644.1 MGP_LPJ_G0021700.1 mouse_genomes_project 15 34911255 34916582 - Pabpc1 protein_coding processed_transcript MGP_LPJ_T0042526.1 MGP_LPJ_G0022279.1 mouse_genomes_project 15 103766229 103781131 - MGP_LPJ_P0042526 Krt84 protein_coding protein_coding MGP_LPJ_T0040408.1 MGP_LPJ_G0021619.1 mouse_genomes_project 15 6451842 6476352 + MGP_LPJ_P0040408 Capsl protein_coding protein_coding MGP_LPJ_T0041755.1 MGP_LPJ_G0022032.1 mouse_genomes_project 15 82700635 82763834 + MGP_LPJ_P0041755 Mei1 protein_coding protein_coding MGP_LPJ_T0041756.1 MGP_LPJ_G0022032.1 mouse_genomes_project 15 82700784 82763998 + MGP_LPJ_P0041756 Mei1 protein_coding unknown_likely_coding MGP_LPJ_T0041757.1 MGP_LPJ_G0022032.1 mouse_genomes_project 15 82715970 82763984 + MGP_LPJ_P0041757 Mei1 protein_coding protein_coding MGP_LPJ_T0041758.1 MGP_LPJ_G0022032.1 mouse_genomes_project 15 82715982 82763986 + MGP_LPJ_P0041758 Mei1 protein_coding protein_coding MGP_LPJ_T0041759.1 MGP_LPJ_G0022032.1 mouse_genomes_project 15 82716669 82763911 + MGP_LPJ_P0041759 Mei1 protein_coding nonsense_mediated_decay MGP_LPJ_T0040817.1 MGP_LPJ_G0021765.1 mouse_genomes_project 15 56678489 56834691 + MGP_LPJ_P0040817 Zhx2 protein_coding protein_coding MGP_LPJ_T0040818.1 MGP_LPJ_G0021765.1 mouse_genomes_project 15 56679564 56814902 + Zhx2 protein_coding processed_transcript MGP_LPJ_T0041035.1 MGP_LPJ_G0021833.1 mouse_genomes_project 15 74556624 74558855 + MGP_LPJ_P0041035 Psca protein_coding protein_coding MGP_LPJ_T0010116.1 MGP_LPJ_G0008234.1 mouse_genomes_project 15 105386808 105386900 + Mir615 miRNA miRNA MGP_LPJ_T0101899.1 MGP_LPJ_G0039936.1 mouse_genomes_project 15 75343841 75346017 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0041479.1 MGP_LPJ_G0021963.1 mouse_genomes_project 15 79518387 79538839 + MGP_LPJ_P0041479 Eif3l protein_coding protein_coding MGP_LPJ_T0006813.1 MGP_LPJ_G0005621.1 mouse_genomes_project 15 93883078 93916736 + Gm26760 lincRNA lincRNA MGP_LPJ_T0010062.1 MGP_LPJ_G0008180.1 mouse_genomes_project 15 71479815 71481355 + miRNA miRNA MGP_LPJ_T0040655.1 MGP_LPJ_G0021705.1 mouse_genomes_project 15 35541944 35683881 + MGP_LPJ_P0040655 Grhl2 protein_coding protein_coding MGP_LPJ_T0040656.1 MGP_LPJ_G0021705.1 mouse_genomes_project 15 35541944 35650910 + MGP_LPJ_P0040656 Grhl2 protein_coding protein_coding MGP_LPJ_T0040657.1 MGP_LPJ_G0021705.1 mouse_genomes_project 15 35541966 35589505 + MGP_LPJ_P0040657 Grhl2 protein_coding protein_coding MGP_LPJ_T0040658.1 MGP_LPJ_G0021705.1 mouse_genomes_project 15 35634422 35683874 + Grhl2 protein_coding processed_transcript MGP_LPJ_T0040659.1 MGP_LPJ_G0021705.1 mouse_genomes_project 15 35652965 35681252 + MGP_LPJ_P0040659 Grhl2 protein_coding protein_coding MGP_LPJ_T0042405.1 MGP_LPJ_G0022243.1 mouse_genomes_project 15 101806675 101874134 - MGP_LPJ_P0042405 Lima1 protein_coding protein_coding MGP_LPJ_T0042406.1 MGP_LPJ_G0022243.1 mouse_genomes_project 15 101809452 101812170 - Lima1 protein_coding retained_intron MGP_LPJ_T0042407.1 MGP_LPJ_G0022243.1 mouse_genomes_project 15 101871583 101905908 - Lima1 protein_coding retained_intron MGP_LPJ_T0042378.1 MGP_LPJ_G0022236.1 mouse_genomes_project 15 101627971 101662574 - MGP_LPJ_P0042378 Racgap1 protein_coding protein_coding MGP_LPJ_T0042379.1 MGP_LPJ_G0022236.1 mouse_genomes_project 15 101627972 101662587 - MGP_LPJ_P0042379 Racgap1 protein_coding protein_coding MGP_LPJ_T0042380.1 MGP_LPJ_G0022236.1 mouse_genomes_project 15 101634666 101641048 - Racgap1 protein_coding retained_intron MGP_LPJ_T0042381.1 MGP_LPJ_G0022236.1 mouse_genomes_project 15 101634946 101662520 - Racgap1 protein_coding processed_transcript MGP_LPJ_T0042382.1 MGP_LPJ_G0022236.1 mouse_genomes_project 15 101636801 101662513 - Racgap1 protein_coding retained_intron MGP_LPJ_T0042383.1 MGP_LPJ_G0022236.1 mouse_genomes_project 15 101636861 101649965 - MGP_LPJ_P0042383 Racgap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0042384.1 MGP_LPJ_G0022236.1 mouse_genomes_project 15 101636907 101648416 - Racgap1 protein_coding retained_intron MGP_LPJ_T0042385.1 MGP_LPJ_G0022236.1 mouse_genomes_project 15 101640386 101662583 - MGP_LPJ_P0042385 Racgap1 protein_coding protein_coding MGP_LPJ_T0042386.1 MGP_LPJ_G0022236.1 mouse_genomes_project 15 101640402 101644922 - Racgap1 protein_coding retained_intron MGP_LPJ_T0042387.1 MGP_LPJ_G0022236.1 mouse_genomes_project 15 101644440 101662500 - MGP_LPJ_P0042387 Racgap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0042388.1 MGP_LPJ_G0022236.1 mouse_genomes_project 15 101646302 101662543 - MGP_LPJ_P0042388 Racgap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0042389.1 MGP_LPJ_G0022236.1 mouse_genomes_project 15 101647606 101662513 - Racgap1 protein_coding retained_intron MGP_LPJ_T0042390.1 MGP_LPJ_G0022236.1 mouse_genomes_project 15 101647820 101662543 - MGP_LPJ_P0042390 Racgap1 protein_coding protein_coding MGP_LPJ_T0042391.1 MGP_LPJ_G0022236.1 mouse_genomes_project 15 101649946 101662574 - MGP_LPJ_P0042391 Racgap1 protein_coding protein_coding MGP_LPJ_T0041753.1 MGP_LPJ_G0022030.1 mouse_genomes_project 15 82670788 82675329 - MGP_LPJ_P0041753 protein_coding protein_coding MGP_LPJ_T0100364.1 MGP_LPJ_G0038627.1 mouse_genomes_project 15 1955696 1955777 + Snord72 snoRNA snoRNA MGP_LPJ_T0044416.1 MGP_LPJ_G0022754.1 mouse_genomes_project 16 44056326 44125424 + MGP_LPJ_P0044416 Slc9c1 protein_coding protein_coding MGP_LPJ_T0044417.1 MGP_LPJ_G0022754.1 mouse_genomes_project 16 44060680 44125309 + MGP_LPJ_P0044417 Slc9c1 protein_coding nonsense_mediated_decay MGP_LPJ_T0044418.1 MGP_LPJ_G0022754.1 mouse_genomes_project 16 44060680 44125309 + MGP_LPJ_P0044418 Slc9c1 protein_coding nonsense_mediated_decay MGP_LPJ_T0045206.1 MGP_LPJ_G0022994.1 mouse_genomes_project 16 98530613 98546477 - MGP_LPJ_P0045206 Mx1 protein_coding nonsense_mediated_decay MGP_LPJ_T0045207.1 MGP_LPJ_G0022994.1 mouse_genomes_project 16 98530615 98546476 - MGP_LPJ_P0045207 Mx1 protein_coding protein_coding MGP_LPJ_T0045208.1 MGP_LPJ_G0022994.1 mouse_genomes_project 16 98530615 98546475 - MGP_LPJ_P0045208 Mx1 protein_coding nonsense_mediated_decay MGP_LPJ_T0045209.1 MGP_LPJ_G0022994.1 mouse_genomes_project 16 98530615 98546476 - MGP_LPJ_P0045209 Mx1 protein_coding protein_coding MGP_LPJ_T0045210.1 MGP_LPJ_G0022994.1 mouse_genomes_project 16 98540873 98546475 - MGP_LPJ_P0045210 Mx1 protein_coding protein_coding MGP_LPJ_T0099203.1 MGP_LPJ_G0037466.1 mouse_genomes_project 16 92791474 92791572 + Gm23210 snRNA snRNA MGP_LPJ_T0098000.1 MGP_LPJ_G0036281.1 mouse_genomes_project 16 58241937 58242867 - pseudogene pseudogene MGP_LPJ_T0099155.1 MGP_LPJ_G0037418.1 mouse_genomes_project 16 6980818 6980921 + Gm24392 snRNA snRNA MGP_LPJ_T0042734.1 MGP_LPJ_G0022357.1 mouse_genomes_project 16 348623 363003 - 1700037C18Rik protein_coding processed_transcript MGP_LPJ_T0042735.1 MGP_LPJ_G0022357.1 mouse_genomes_project 16 348625 362107 - MGP_LPJ_P0042735 1700037C18Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0042737.1 MGP_LPJ_G0022357.1 mouse_genomes_project 16 357747 363039 - MGP_LPJ_P0042737 1700037C18Rik protein_coding protein_coding MGP_LPJ_T0042738.1 MGP_LPJ_G0022357.1 mouse_genomes_project 16 360147 362052 - MGP_LPJ_P0042738 1700037C18Rik protein_coding protein_coding MGP_LPJ_T0042739.1 MGP_LPJ_G0022357.1 mouse_genomes_project 16 360607 362001 - MGP_LPJ_P0042739 1700037C18Rik protein_coding protein_coding MGP_LPJ_T0042740.1 MGP_LPJ_G0022357.1 mouse_genomes_project 16 361362 362973 - MGP_LPJ_P0042740 1700037C18Rik protein_coding protein_coding MGP_LPJ_T0043384.1 MGP_LPJ_G0022507.1 mouse_genomes_project 16 15239806 15244630 + Trmt2a protein_coding retained_intron MGP_LPJ_T0043385.1 MGP_LPJ_G0022507.1 mouse_genomes_project 16 15240010 15244630 + MGP_LPJ_P0043385 Trmt2a protein_coding protein_coding MGP_LPJ_T0043386.1 MGP_LPJ_G0022507.1 mouse_genomes_project 16 15240010 15245900 + MGP_LPJ_P0043386 Trmt2a protein_coding protein_coding MGP_LPJ_T0043387.1 MGP_LPJ_G0022507.1 mouse_genomes_project 16 15240129 15244630 + Trmt2a protein_coding retained_intron MGP_LPJ_T0043388.1 MGP_LPJ_G0022507.1 mouse_genomes_project 16 15240136 15244636 + Trmt2a protein_coding retained_intron MGP_LPJ_T0043389.1 MGP_LPJ_G0022507.1 mouse_genomes_project 16 15240136 15244626 + Trmt2a protein_coding retained_intron MGP_LPJ_T0043390.1 MGP_LPJ_G0022507.1 mouse_genomes_project 16 15240189 15244630 + MGP_LPJ_P0043390 Trmt2a protein_coding protein_coding MGP_LPJ_T0043391.1 MGP_LPJ_G0022507.1 mouse_genomes_project 16 15241148 15244240 + MGP_LPJ_P0043391 Trmt2a protein_coding protein_coding MGP_LPJ_T0043392.1 MGP_LPJ_G0022507.1 mouse_genomes_project 16 15242549 15244629 + MGP_LPJ_P0043392 Trmt2a protein_coding protein_coding MGP_LPJ_T0043393.1 MGP_LPJ_G0022507.1 mouse_genomes_project 16 15243348 15244359 + Trmt2a protein_coding retained_intron MGP_LPJ_T0045155.1 MGP_LPJ_G0022983.1 mouse_genomes_project 16 96967882 97070103 - MGP_LPJ_P0045155 Brwd1 protein_coding protein_coding MGP_LPJ_T0045156.1 MGP_LPJ_G0022983.1 mouse_genomes_project 16 96968239 97070122 - MGP_LPJ_P0045156 Brwd1 protein_coding protein_coding MGP_LPJ_T0045157.1 MGP_LPJ_G0022983.1 mouse_genomes_project 16 96977925 97070122 - MGP_LPJ_P0045157 Brwd1 protein_coding protein_coding MGP_LPJ_T0045158.1 MGP_LPJ_G0022983.1 mouse_genomes_project 16 96978014 97051524 - MGP_LPJ_P0045158 Brwd1 protein_coding protein_coding MGP_LPJ_T0045159.1 MGP_LPJ_G0022983.1 mouse_genomes_project 16 96979686 97008175 - MGP_LPJ_P0045159 Brwd1 protein_coding protein_coding MGP_LPJ_T0045160.1 MGP_LPJ_G0022983.1 mouse_genomes_project 16 96990082 97029255 - MGP_LPJ_P0045160 Brwd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0045161.1 MGP_LPJ_G0022983.1 mouse_genomes_project 16 96994791 96996489 - Brwd1 protein_coding retained_intron MGP_LPJ_T0045162.1 MGP_LPJ_G0022983.1 mouse_genomes_project 16 96998096 96998549 - Brwd1 protein_coding retained_intron MGP_LPJ_T0045163.1 MGP_LPJ_G0022983.1 mouse_genomes_project 16 97013809 97016395 - Brwd1 protein_coding retained_intron MGP_LPJ_T0045164.1 MGP_LPJ_G0022983.1 mouse_genomes_project 16 97016626 97044547 - MGP_LPJ_P0045164 Brwd1 protein_coding protein_coding MGP_LPJ_T0045165.1 MGP_LPJ_G0022983.1 mouse_genomes_project 16 97016750 97044512 - MGP_LPJ_P0045165 Brwd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0045166.1 MGP_LPJ_G0022983.1 mouse_genomes_project 16 97028316 97029538 - Brwd1 protein_coding retained_intron MGP_LPJ_T0045167.1 MGP_LPJ_G0022983.1 mouse_genomes_project 16 97051644 97070201 - MGP_LPJ_P0045167 Brwd1 protein_coding protein_coding MGP_LPJ_T0043151.1 MGP_LPJ_G0022460.1 mouse_genomes_project 16 13564517 13565659 - MGP_LPJ_P0043151 Olfr19 protein_coding protein_coding MGP_LPJ_T0043152.1 MGP_LPJ_G0022460.1 mouse_genomes_project 16 13564976 13568047 - MGP_LPJ_P0043152 Olfr19 protein_coding protein_coding MGP_LPJ_T0006845.1 MGP_LPJ_G0005646.1 mouse_genomes_project 16 13938508 13940100 + 1700056N10Rik lincRNA lincRNA MGP_LPJ_T0044085.1 MGP_LPJ_G0022676.1 mouse_genomes_project 16 34021776 34059484 + MGP_LPJ_P0044085 Parp9 protein_coding protein_coding MGP_LPJ_T0044086.1 MGP_LPJ_G0022676.1 mouse_genomes_project 16 34021865 34055481 + MGP_LPJ_P0044086 Parp9 protein_coding protein_coding MGP_LPJ_T0044087.1 MGP_LPJ_G0022676.1 mouse_genomes_project 16 34021883 34027352 + Parp9 protein_coding retained_intron MGP_LPJ_T0044088.1 MGP_LPJ_G0022676.1 mouse_genomes_project 16 34021914 34032201 + MGP_LPJ_P0044088 Parp9 protein_coding nonsense_mediated_decay MGP_LPJ_T0044089.1 MGP_LPJ_G0022676.1 mouse_genomes_project 16 34024580 34032436 + Parp9 protein_coding processed_transcript MGP_LPJ_T0044090.1 MGP_LPJ_G0022676.1 mouse_genomes_project 16 34032798 34041366 + MGP_LPJ_P0044090 Parp9 protein_coding nonsense_mediated_decay MGP_LPJ_T0099189.1 MGP_LPJ_G0037452.1 mouse_genomes_project 16 49648410 49648517 - Gm24925 snRNA snRNA MGP_LPJ_T0044559.1 MGP_LPJ_G0022794.1 mouse_genomes_project 16 55767952 55853405 - MGP_LPJ_P0044559 Tmem45a protein_coding protein_coding MGP_LPJ_T0044560.1 MGP_LPJ_G0022794.1 mouse_genomes_project 16 55769279 55772658 - Tmem45a protein_coding processed_transcript MGP_LPJ_T0044561.1 MGP_LPJ_G0022794.1 mouse_genomes_project 16 55789579 55796945 - MGP_LPJ_P0044561 Tmem45a protein_coding protein_coding MGP_LPJ_T0044828.1 MGP_LPJ_G0022902.1 mouse_genomes_project 16 89378231 89378710 - MGP_LPJ_P0044828 Krtap19-2 protein_coding protein_coding MGP_LPJ_T0044310.1 MGP_LPJ_G0022732.1 mouse_genomes_project 16 42322267 42372881 + MGP_LPJ_P0044310 Ccdc191 protein_coding protein_coding MGP_LPJ_T0044311.1 MGP_LPJ_G0022732.1 mouse_genomes_project 16 42322270 42399249 + MGP_LPJ_P0044311 Ccdc191 protein_coding protein_coding MGP_LPJ_T0044312.1 MGP_LPJ_G0022732.1 mouse_genomes_project 16 42322308 42342611 + MGP_LPJ_P0044312 Ccdc191 protein_coding protein_coding MGP_LPJ_T0044313.1 MGP_LPJ_G0022732.1 mouse_genomes_project 16 42322359 42398347 + MGP_LPJ_P0044313 Ccdc191 protein_coding protein_coding MGP_LPJ_T0044314.1 MGP_LPJ_G0022732.1 mouse_genomes_project 16 42372316 42376958 + Ccdc191 protein_coding processed_transcript MGP_LPJ_T0044315.1 MGP_LPJ_G0022732.1 mouse_genomes_project 16 42372437 42399249 + MGP_LPJ_P0044315 Ccdc191 protein_coding protein_coding MGP_LPJ_T0044623.1 MGP_LPJ_G0022818.1 mouse_genomes_project 16 58087908 58171728 - MGP_LPJ_P0044623 protein_coding protein_coding MGP_LPJ_T0044627.1 MGP_LPJ_G0022818.1 mouse_genomes_project 16 58124945 58136738 - MGP_LPJ_P0044627 protein_coding protein_coding MGP_LPJ_T0043731.1 MGP_LPJ_G0022584.1 mouse_genomes_project 16 20589160 20728035 + MGP_LPJ_P0043731 St6gal1 protein_coding protein_coding MGP_LPJ_T0043732.1 MGP_LPJ_G0022584.1 mouse_genomes_project 16 20590441 20687403 + St6gal1 protein_coding processed_transcript MGP_LPJ_T0043733.1 MGP_LPJ_G0022584.1 mouse_genomes_project 16 20590441 20728037 + MGP_LPJ_P0043733 St6gal1 protein_coding protein_coding MGP_LPJ_T0043734.1 MGP_LPJ_G0022584.1 mouse_genomes_project 16 20635593 20687511 + MGP_LPJ_P0043734 St6gal1 protein_coding protein_coding MGP_LPJ_T0043735.1 MGP_LPJ_G0022584.1 mouse_genomes_project 16 20656835 20726282 + MGP_LPJ_P0043735 St6gal1 protein_coding protein_coding MGP_LPJ_T0043736.1 MGP_LPJ_G0022584.1 mouse_genomes_project 16 20726002 20728035 + St6gal1 protein_coding processed_transcript MGP_LPJ_T0043018.1 MGP_LPJ_G0022426.1 mouse_genomes_project 16 8138518 8580723 + MGP_LPJ_P0043018 Snx29 protein_coding protein_coding MGP_LPJ_T0043019.1 MGP_LPJ_G0022426.1 mouse_genomes_project 16 8138582 8218016 + MGP_LPJ_P0043019 Snx29 protein_coding protein_coding MGP_LPJ_T0043020.1 MGP_LPJ_G0022426.1 mouse_genomes_project 16 8219827 8580723 + MGP_LPJ_P0043020 Snx29 protein_coding protein_coding MGP_LPJ_T0043021.1 MGP_LPJ_G0022426.1 mouse_genomes_project 16 8220836 8486692 + MGP_LPJ_P0043021 Snx29 protein_coding protein_coding MGP_LPJ_T0043022.1 MGP_LPJ_G0022426.1 mouse_genomes_project 16 8234678 8504586 + MGP_LPJ_P0043022 Snx29 protein_coding protein_coding MGP_LPJ_T0043023.1 MGP_LPJ_G0022426.1 mouse_genomes_project 16 8259743 8456458 + Snx29 protein_coding retained_intron MGP_LPJ_T0043024.1 MGP_LPJ_G0022426.1 mouse_genomes_project 16 8261868 8486633 + Snx29 protein_coding retained_intron MGP_LPJ_T0045211.1 MGP_LPJ_G0022995.1 mouse_genomes_project 16 98556208 98561441 - Fam3b protein_coding processed_transcript MGP_LPJ_T0045212.1 MGP_LPJ_G0022995.1 mouse_genomes_project 16 98556242 98591367 - MGP_LPJ_P0045212 Fam3b protein_coding protein_coding MGP_LPJ_T0100432.1 MGP_LPJ_G0038695.1 mouse_genomes_project 16 36405765 36405894 - Gm27931 snoRNA snoRNA MGP_LPJ_T0010140.1 MGP_LPJ_G0008258.1 mouse_genomes_project 16 17673696 17673781 + Mir1224 miRNA miRNA MGP_LPJ_T0003704.1 MGP_LPJ_G0003350.1 mouse_genomes_project 16 91657519 91660476 + Gm15965 antisense antisense MGP_LPJ_T0043815.1 MGP_LPJ_G0022611.1 mouse_genomes_project 16 27960151 27971263 - MGP_LPJ_P0043815 Cpn2 protein_coding protein_coding MGP_LPJ_T0044528.1 MGP_LPJ_G0022789.1 mouse_genomes_project 16 54981835 54983612 + Senp7 protein_coding processed_transcript MGP_LPJ_T0044529.1 MGP_LPJ_G0022789.1 mouse_genomes_project 16 54981840 55105996 + MGP_LPJ_P0044529 Senp7 protein_coding protein_coding MGP_LPJ_T0044530.1 MGP_LPJ_G0022789.1 mouse_genomes_project 16 54981840 55038140 + MGP_LPJ_P0044530 Senp7 protein_coding protein_coding MGP_LPJ_T0044531.1 MGP_LPJ_G0022789.1 mouse_genomes_project 16 54981895 55038135 + Senp7 protein_coding processed_transcript MGP_LPJ_T0044532.1 MGP_LPJ_G0022789.1 mouse_genomes_project 16 54981899 55105996 + MGP_LPJ_P0044532 Senp7 protein_coding protein_coding MGP_LPJ_T0044533.1 MGP_LPJ_G0022789.1 mouse_genomes_project 16 54981906 55011327 + Senp7 protein_coding retained_intron MGP_LPJ_T0044534.1 MGP_LPJ_G0022789.1 mouse_genomes_project 16 54981906 55050582 + MGP_LPJ_P0044534 Senp7 protein_coding protein_coding MGP_LPJ_T0044535.1 MGP_LPJ_G0022789.1 mouse_genomes_project 16 54981911 55038016 + Senp7 protein_coding processed_transcript MGP_LPJ_T0044536.1 MGP_LPJ_G0022789.1 mouse_genomes_project 16 54981911 55053450 + MGP_LPJ_P0044536 Senp7 protein_coding protein_coding MGP_LPJ_T0044537.1 MGP_LPJ_G0022789.1 mouse_genomes_project 16 55095992 55104716 + Senp7 protein_coding retained_intron MGP_LPJ_T0044538.1 MGP_LPJ_G0022789.1 mouse_genomes_project 16 55096466 55104325 + Senp7 protein_coding retained_intron MGP_LPJ_T0044539.1 MGP_LPJ_G0022789.1 mouse_genomes_project 16 55098451 55105968 + Senp7 protein_coding processed_transcript MGP_LPJ_T0044540.1 MGP_LPJ_G0022789.1 mouse_genomes_project 16 55099628 55104230 + Senp7 protein_coding processed_transcript MGP_LPJ_T0044541.1 MGP_LPJ_G0022789.1 mouse_genomes_project 16 55102097 55104705 + Senp7 protein_coding processed_transcript MGP_LPJ_T0006868.1 MGP_LPJ_G0005667.1 mouse_genomes_project 16 47848392 47912060 - 1700026J12Rik lincRNA lincRNA MGP_LPJ_T0006869.1 MGP_LPJ_G0005667.1 mouse_genomes_project 16 47848419 47912060 - 1700026J12Rik lincRNA lincRNA MGP_LPJ_T0010148.1 MGP_LPJ_G0008266.1 mouse_genomes_project 16 30100456 30100590 - Mir1946a miRNA miRNA MGP_LPJ_T0000986.1 MGP_LPJ_G0000913.1 mouse_genomes_project 16 21396437 21398183 + TEC TEC MGP_LPJ_T0045172.1 MGP_LPJ_G0022985.1 mouse_genomes_project 16 97142468 97151887 + Wrb protein_coding retained_intron MGP_LPJ_T0045173.1 MGP_LPJ_G0022985.1 mouse_genomes_project 16 97142468 97143826 + Wrb protein_coding processed_transcript MGP_LPJ_T0045174.1 MGP_LPJ_G0022985.1 mouse_genomes_project 16 97142468 97154953 + MGP_LPJ_P0045174 Wrb protein_coding protein_coding MGP_LPJ_T0045175.1 MGP_LPJ_G0022985.1 mouse_genomes_project 16 97142472 97148952 + MGP_LPJ_P0045175 Wrb protein_coding protein_coding MGP_LPJ_T0003699.1 MGP_LPJ_G0003347.1 mouse_genomes_project 16 54883418 54884769 - Zbtb11os1 antisense antisense MGP_LPJ_T0100451.1 MGP_LPJ_G0038714.1 mouse_genomes_project 16 78329565 78329695 - Gm25038 snoRNA snoRNA MGP_LPJ_T0003691.1 MGP_LPJ_G0003341.1 mouse_genomes_project 16 37052920 37053257 + antisense antisense MGP_LPJ_T0043091.1 MGP_LPJ_G0022443.1 mouse_genomes_project 16 11092882 11123431 + MGP_LPJ_P0043091 Nde1 protein_coding protein_coding MGP_LPJ_T0043092.1 MGP_LPJ_G0022443.1 mouse_genomes_project 16 11092894 11123331 + MGP_LPJ_P0043092 Nde1 protein_coding protein_coding MGP_LPJ_T0043093.1 MGP_LPJ_G0022443.1 mouse_genomes_project 16 11092905 11123421 + MGP_LPJ_P0043093 Nde1 protein_coding nonsense_mediated_decay MGP_LPJ_T0043094.1 MGP_LPJ_G0022443.1 mouse_genomes_project 16 11092911 11100437 + Nde1 protein_coding retained_intron MGP_LPJ_T0043095.1 MGP_LPJ_G0022443.1 mouse_genomes_project 16 11092952 11123421 + MGP_LPJ_P0043095 Nde1 protein_coding protein_coding MGP_LPJ_T0043096.1 MGP_LPJ_G0022443.1 mouse_genomes_project 16 11092956 11120943 + Nde1 protein_coding processed_transcript MGP_LPJ_T0043097.1 MGP_LPJ_G0022443.1 mouse_genomes_project 16 11104685 11118900 + Nde1 protein_coding retained_intron MGP_LPJ_T0043098.1 MGP_LPJ_G0022443.1 mouse_genomes_project 16 11113122 11121023 + MGP_LPJ_P0043098 Nde1 protein_coding protein_coding MGP_LPJ_T0010164.1 MGP_LPJ_G0008282.1 mouse_genomes_project 16 59845284 59845397 - Gm27784 miRNA miRNA MGP_LPJ_T0013130.1 MGP_LPJ_G0011221.1 mouse_genomes_project 16 13730683 13730933 - processed_pseudogene processed_pseudogene MGP_LPJ_T0044675.1 MGP_LPJ_G0022845.1 mouse_genomes_project 16 64091775 64163405 - MGP_LPJ_P0044675 protein_coding protein_coding MGP_LPJ_T0044928.1 MGP_LPJ_G0022944.1 mouse_genomes_project 16 92120840 92143943 + MGP_LPJ_P0044928 Il10rb protein_coding nonsense_mediated_decay MGP_LPJ_T0044929.1 MGP_LPJ_G0022944.1 mouse_genomes_project 16 92120911 92141149 + MGP_LPJ_P0044929 Il10rb protein_coding protein_coding MGP_LPJ_T0044930.1 MGP_LPJ_G0022944.1 mouse_genomes_project 16 92120996 92135886 + Il10rb protein_coding retained_intron MGP_LPJ_T0044931.1 MGP_LPJ_G0022944.1 mouse_genomes_project 16 92120996 92140503 + MGP_LPJ_P0044931 Il10rb protein_coding nonsense_mediated_decay MGP_LPJ_T0044932.1 MGP_LPJ_G0022944.1 mouse_genomes_project 16 92121120 92129092 + Il10rb protein_coding processed_transcript MGP_LPJ_T0099173.1 MGP_LPJ_G0037436.1 mouse_genomes_project 16 34237349 34237452 - Gm23080 snRNA snRNA MGP_LPJ_T0011425.1 MGP_LPJ_G0009543.1 mouse_genomes_project 16 34620219 34620537 - Gm25902 misc_RNA misc_RNA MGP_LPJ_T0044565.1 MGP_LPJ_G0022798.1 mouse_genomes_project 16 56143495 56198766 - MGP_LPJ_P0044565 Tbc1d23 protein_coding unknown_likely_coding MGP_LPJ_T0044566.1 MGP_LPJ_G0022798.1 mouse_genomes_project 16 56143500 56198866 - MGP_LPJ_P0044566 Tbc1d23 protein_coding protein_coding MGP_LPJ_T0044933.1 MGP_LPJ_G0022945.1 mouse_genomes_project 16 92207875 92230495 + MGP_LPJ_P0044933 Ifnar1 protein_coding protein_coding MGP_LPJ_T0044934.1 MGP_LPJ_G0022945.1 mouse_genomes_project 16 92207886 92230491 + MGP_LPJ_P0044934 Ifnar1 protein_coding nonsense_mediated_decay MGP_LPJ_T0044935.1 MGP_LPJ_G0022945.1 mouse_genomes_project 16 92207901 92230495 + MGP_LPJ_P0044935 Ifnar1 protein_coding protein_coding MGP_LPJ_T0044936.1 MGP_LPJ_G0022945.1 mouse_genomes_project 16 92207914 92214427 + Ifnar1 protein_coding retained_intron MGP_LPJ_T0044937.1 MGP_LPJ_G0022945.1 mouse_genomes_project 16 92207973 92218779 + MGP_LPJ_P0044937 Ifnar1 protein_coding protein_coding MGP_LPJ_T0044551.1 MGP_LPJ_G0022792.1 mouse_genomes_project 16 55640486 55667533 - MGP_LPJ_P0044551 Tfg protein_coding protein_coding MGP_LPJ_T0044552.1 MGP_LPJ_G0022792.1 mouse_genomes_project 16 55641031 55655852 - MGP_LPJ_P0044552 Tfg protein_coding protein_coding MGP_LPJ_T0044553.1 MGP_LPJ_G0022792.1 mouse_genomes_project 16 55641122 55654621 - MGP_LPJ_P0044553 Tfg protein_coding protein_coding MGP_LPJ_T0044554.1 MGP_LPJ_G0022792.1 mouse_genomes_project 16 55653653 55667393 - MGP_LPJ_P0044554 Tfg protein_coding protein_coding MGP_LPJ_T0044555.1 MGP_LPJ_G0022792.1 mouse_genomes_project 16 55654606 55663118 - MGP_LPJ_P0044555 Tfg protein_coding protein_coding MGP_LPJ_T0044556.1 MGP_LPJ_G0022792.1 mouse_genomes_project 16 55654688 55667442 - MGP_LPJ_P0044556 Tfg protein_coding protein_coding MGP_LPJ_T0044557.1 MGP_LPJ_G0022792.1 mouse_genomes_project 16 55655768 55667264 - MGP_LPJ_P0044557 Tfg protein_coding protein_coding MGP_LPJ_T0042977.1 MGP_LPJ_G0022419.1 mouse_genomes_project 16 7752195 7789650 - MGP_LPJ_P0042977 Litaf protein_coding protein_coding MGP_LPJ_T0042978.1 MGP_LPJ_G0022419.1 mouse_genomes_project 16 7753744 7770070 - MGP_LPJ_P0042978 Litaf protein_coding protein_coding MGP_LPJ_T0042979.1 MGP_LPJ_G0022419.1 mouse_genomes_project 16 7756263 7866503 - MGP_LPJ_P0042979 Litaf protein_coding protein_coding MGP_LPJ_T0042980.1 MGP_LPJ_G0022419.1 mouse_genomes_project 16 7760875 7789600 - Litaf protein_coding retained_intron MGP_LPJ_T0044833.1 MGP_LPJ_G0022907.1 mouse_genomes_project 16 89444299 89444760 - MGP_LPJ_P0044833 Krtap19-9b protein_coding protein_coding MGP_LPJ_T0006879.1 MGP_LPJ_G0005673.1 mouse_genomes_project 16 56247648 56248276 + Gm26800 lincRNA lincRNA MGP_LPJ_T0044624.1 MGP_LPJ_G0022819.1 mouse_genomes_project 16 58111703 58112867 - MGP_LPJ_P0044624 Olfr190 protein_coding protein_coding MGP_LPJ_T0044625.1 MGP_LPJ_G0022819.1 mouse_genomes_project 16 58111703 58112805 - MGP_LPJ_P0044625 Olfr190 protein_coding protein_coding MGP_LPJ_T0043540.1 MGP_LPJ_G0022545.1 mouse_genomes_project 16 17582650 17598696 + MGP_LPJ_P0043540 Dvl3 protein_coding protein_coding MGP_LPJ_T0043541.1 MGP_LPJ_G0022545.1 mouse_genomes_project 16 17582732 17599566 + MGP_LPJ_P0043541 Dvl3 protein_coding protein_coding MGP_LPJ_T0043542.1 MGP_LPJ_G0022545.1 mouse_genomes_project 16 17582774 17598692 + MGP_LPJ_P0043542 Dvl3 protein_coding protein_coding MGP_LPJ_T0043543.1 MGP_LPJ_G0022545.1 mouse_genomes_project 16 17582854 17592425 + Dvl3 protein_coding retained_intron MGP_LPJ_T0043936.1 MGP_LPJ_G0022644.1 mouse_genomes_project 16 30450350 30475363 + MGP_LPJ_P0043936 Tfrc protein_coding protein_coding MGP_LPJ_T0043937.1 MGP_LPJ_G0022644.1 mouse_genomes_project 16 30450413 30466049 + MGP_LPJ_P0043937 Tfrc protein_coding protein_coding MGP_LPJ_T0043938.1 MGP_LPJ_G0022644.1 mouse_genomes_project 16 30450680 30454668 + MGP_LPJ_P0043938 Tfrc protein_coding protein_coding MGP_LPJ_T0043939.1 MGP_LPJ_G0022644.1 mouse_genomes_project 16 30456674 30458600 + Tfrc protein_coding retained_intron MGP_LPJ_T0043940.1 MGP_LPJ_G0022644.1 mouse_genomes_project 16 30459722 30462327 + Tfrc protein_coding retained_intron MGP_LPJ_T0043941.1 MGP_LPJ_G0022644.1 mouse_genomes_project 16 30466749 30475359 + Tfrc protein_coding retained_intron MGP_LPJ_T0043185.1 MGP_LPJ_G0022465.1 mouse_genomes_project 16 13866543 13938442 + MGP_LPJ_P0043185 Mapk1 protein_coding protein_coding MGP_LPJ_T0043186.1 MGP_LPJ_G0022465.1 mouse_genomes_project 16 13866543 13935738 + MGP_LPJ_P0043186 Mapk1 protein_coding protein_coding MGP_LPJ_T0043187.1 MGP_LPJ_G0022465.1 mouse_genomes_project 16 13866728 13928769 + MGP_LPJ_P0043187 Mapk1 protein_coding protein_coding MGP_LPJ_T0043188.1 MGP_LPJ_G0022465.1 mouse_genomes_project 16 13908179 13913822 + Mapk1 protein_coding retained_intron MGP_LPJ_T0043189.1 MGP_LPJ_G0022465.1 mouse_genomes_project 16 13915792 13916961 + Mapk1 protein_coding retained_intron MGP_LPJ_T0043190.1 MGP_LPJ_G0022465.1 mouse_genomes_project 16 13916132 13934852 + MGP_LPJ_P0043190 Mapk1 protein_coding protein_coding MGP_LPJ_T0043191.1 MGP_LPJ_G0022465.1 mouse_genomes_project 16 13925066 13928434 + Mapk1 protein_coding processed_transcript MGP_LPJ_T0043192.1 MGP_LPJ_G0022465.1 mouse_genomes_project 16 13925277 13935199 + Mapk1 protein_coding processed_transcript MGP_LPJ_T0042970.1 MGP_LPJ_G0022414.1 mouse_genomes_project 16 7570178 7570591 - MGP_LPJ_P0042970 Prm3 protein_coding protein_coding MGP_LPJ_T0100425.1 MGP_LPJ_G0038688.1 mouse_genomes_project 16 29533886 29534029 - Gm24879 snoRNA snoRNA MGP_LPJ_T0099200.1 MGP_LPJ_G0037463.1 mouse_genomes_project 16 89108625 89108709 - Gm23587 snRNA snRNA MGP_LPJ_T0043031.1 MGP_LPJ_G0022429.1 mouse_genomes_project 16 8832346 8843615 + Shisa9 protein_coding processed_transcript MGP_LPJ_T0043032.1 MGP_LPJ_G0022429.1 mouse_genomes_project 16 8832814 9140296 + MGP_LPJ_P0043032 Shisa9 protein_coding protein_coding MGP_LPJ_T0043033.1 MGP_LPJ_G0022429.1 mouse_genomes_project 16 8832814 9141249 + MGP_LPJ_P0043033 Shisa9 protein_coding protein_coding MGP_LPJ_T0043034.1 MGP_LPJ_G0022429.1 mouse_genomes_project 16 8832911 8838314 + Shisa9 protein_coding processed_transcript MGP_LPJ_T0042835.1 MGP_LPJ_G0022375.1 mouse_genomes_project 16 1342292 1360791 + MGP_LPJ_P0042835 4930562C15Rik protein_coding non_stop_decay MGP_LPJ_T0042836.1 MGP_LPJ_G0022375.1 mouse_genomes_project 16 1342292 1373732 + MGP_LPJ_P0042836 4930562C15Rik protein_coding protein_coding MGP_LPJ_T0042837.1 MGP_LPJ_G0022375.1 mouse_genomes_project 16 1347981 1360797 + MGP_LPJ_P0042837 4930562C15Rik protein_coding non_stop_decay MGP_LPJ_T0042838.1 MGP_LPJ_G0022375.1 mouse_genomes_project 16 1359426 1367103 + MGP_LPJ_P0042838 4930562C15Rik protein_coding protein_coding MGP_LPJ_T0042839.1 MGP_LPJ_G0022375.1 mouse_genomes_project 16 1367613 1373390 + MGP_LPJ_P0042839 4930562C15Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0042840.1 MGP_LPJ_G0022375.1 mouse_genomes_project 16 1370363 1371219 + 4930562C15Rik protein_coding retained_intron MGP_LPJ_T0045137.1 MGP_LPJ_G0022980.1 mouse_genomes_project 16 96293908 96468506 - MGP_LPJ_P0045137 Erg protein_coding protein_coding MGP_LPJ_T0045138.1 MGP_LPJ_G0022980.1 mouse_genomes_project 16 96293912 96401394 - MGP_LPJ_P0045138 Erg protein_coding protein_coding MGP_LPJ_T0045139.1 MGP_LPJ_G0022980.1 mouse_genomes_project 16 96294948 96534918 - MGP_LPJ_P0045139 Erg protein_coding protein_coding MGP_LPJ_T0045140.1 MGP_LPJ_G0022980.1 mouse_genomes_project 16 96294948 96468506 - MGP_LPJ_P0045140 Erg protein_coding protein_coding MGP_LPJ_T0045141.1 MGP_LPJ_G0022980.1 mouse_genomes_project 16 96295080 96401439 - MGP_LPJ_P0045141 Erg protein_coding protein_coding MGP_LPJ_T0045142.1 MGP_LPJ_G0022980.1 mouse_genomes_project 16 96295383 96461323 - MGP_LPJ_P0045142 Erg protein_coding protein_coding MGP_LPJ_T0045143.1 MGP_LPJ_G0022980.1 mouse_genomes_project 16 96295543 96401336 - MGP_LPJ_P0045143 Erg protein_coding protein_coding MGP_LPJ_T0045144.1 MGP_LPJ_G0022980.1 mouse_genomes_project 16 96295543 96468464 - MGP_LPJ_P0045144 Erg protein_coding protein_coding MGP_LPJ_T0045145.1 MGP_LPJ_G0022980.1 mouse_genomes_project 16 96295543 96401336 - MGP_LPJ_P0045145 Erg protein_coding protein_coding MGP_LPJ_T0043160.1 MGP_LPJ_G0022462.1 mouse_genomes_project 16 13741803 13745118 - MGP_LPJ_P0043160 Igll1 protein_coding protein_coding MGP_LPJ_T0043161.1 MGP_LPJ_G0022462.1 mouse_genomes_project 16 13741803 13744950 - MGP_LPJ_P0043161 Igll1 protein_coding protein_coding MGP_LPJ_T0043162.1 MGP_LPJ_G0022462.1 mouse_genomes_project 16 13741806 13745118 - Igll1 protein_coding retained_intron MGP_LPJ_T0044515.1 MGP_LPJ_G0022785.1 mouse_genomes_project 16 54875400 54881595 + MGP_LPJ_P0044515 Rpl24 protein_coding protein_coding MGP_LPJ_T0044516.1 MGP_LPJ_G0022785.1 mouse_genomes_project 16 54875546 54881595 + Rpl24 protein_coding processed_transcript MGP_LPJ_T0044517.1 MGP_LPJ_G0022785.1 mouse_genomes_project 16 54875672 54879892 + Rpl24 protein_coding retained_intron MGP_LPJ_T0044518.1 MGP_LPJ_G0022785.1 mouse_genomes_project 16 54880112 54881595 + Rpl24 protein_coding retained_intron MGP_LPJ_T0043378.1 MGP_LPJ_G0022503.1 mouse_genomes_project 16 15113350 15140032 + MGP_LPJ_P0043378 Rtn4r protein_coding protein_coding MGP_LPJ_T0044926.1 MGP_LPJ_G0022943.1 mouse_genomes_project 16 92103910 92135026 + MGP_LPJ_P0044926 Gm21970 protein_coding nonsense_mediated_decay MGP_LPJ_T0044927.1 MGP_LPJ_G0022943.1 mouse_genomes_project 16 92103910 92135026 + MGP_LPJ_P0044927 Gm21970 protein_coding protein_coding MGP_LPJ_T0045025.1 MGP_LPJ_G0022959.1 mouse_genomes_project 16 93090990 93093669 - MGP_LPJ_P0045025 4930563D23Rik protein_coding protein_coding MGP_LPJ_T0013109.1 MGP_LPJ_G0011200.1 mouse_genomes_project 16 1029086 1029474 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010139.1 MGP_LPJ_G0008257.1 mouse_genomes_project 16 16925110 16925212 - Gm27883 miRNA miRNA MGP_LPJ_T0003661.1 MGP_LPJ_G0003317.1 mouse_genomes_project 16 8507844 8511533 - Gm4279 antisense antisense MGP_LPJ_T0043471.1 MGP_LPJ_G0022522.1 mouse_genomes_project 16 15848994 15976900 + MGP_LPJ_P0043471 Gm28539 protein_coding nonsense_mediated_decay MGP_LPJ_T0044165.1 MGP_LPJ_G0022697.1 mouse_genomes_project 16 35064603 35091223 + MGP_LPJ_P0044165 protein_coding unknown_likely_coding MGP_LPJ_T0044166.1 MGP_LPJ_G0022697.1 mouse_genomes_project 16 35064931 35090004 + MGP_LPJ_P0044166 protein_coding nonsense_mediated_decay MGP_LPJ_T0044167.1 MGP_LPJ_G0022697.1 mouse_genomes_project 16 35083224 35085107 + protein_coding retained_intron MGP_LPJ_T0044150.1 MGP_LPJ_G0022695.1 mouse_genomes_project 16 34952682 34956626 + Iqcb1 protein_coding processed_transcript MGP_LPJ_T0044151.1 MGP_LPJ_G0022695.1 mouse_genomes_project 16 34952704 35000295 + MGP_LPJ_P0044151 Iqcb1 protein_coding protein_coding MGP_LPJ_T0044152.1 MGP_LPJ_G0022695.1 mouse_genomes_project 16 34952705 35000287 + MGP_LPJ_P0044152 Iqcb1 protein_coding protein_coding MGP_LPJ_T0044153.1 MGP_LPJ_G0022695.1 mouse_genomes_project 16 34973181 34977585 + Iqcb1 protein_coding retained_intron MGP_LPJ_T0044154.1 MGP_LPJ_G0022695.1 mouse_genomes_project 16 34973576 34977603 + Iqcb1 protein_coding processed_transcript MGP_LPJ_T0044155.1 MGP_LPJ_G0022695.1 mouse_genomes_project 16 34977464 34985649 + Iqcb1 protein_coding processed_transcript MGP_LPJ_T0044156.1 MGP_LPJ_G0022695.1 mouse_genomes_project 16 34977799 34982459 + Iqcb1 protein_coding processed_transcript MGP_LPJ_T0044010.1 MGP_LPJ_G0022654.1 mouse_genomes_project 16 30971111 31037985 + MGP_LPJ_P0044010 Lmln protein_coding protein_coding MGP_LPJ_T0044011.1 MGP_LPJ_G0022654.1 mouse_genomes_project 16 31000587 31014266 + Lmln protein_coding retained_intron MGP_LPJ_T0044012.1 MGP_LPJ_G0022654.1 mouse_genomes_project 16 31027033 31034201 + Lmln protein_coding retained_intron MGP_LPJ_T0044013.1 MGP_LPJ_G0022654.1 mouse_genomes_project 16 31034554 31035896 + Lmln protein_coding processed_transcript MGP_LPJ_T0100437.1 MGP_LPJ_G0038700.1 mouse_genomes_project 16 51753888 51754014 - Gm25723 snoRNA snoRNA MGP_LPJ_T0043045.1 MGP_LPJ_G0022433.1 mouse_genomes_project 16 10567794 10598797 + MGP_LPJ_P0043045 Bfar protein_coding protein_coding MGP_LPJ_T0043047.1 MGP_LPJ_G0022433.1 mouse_genomes_project 16 10567886 10594474 + MGP_LPJ_P0043047 Bfar protein_coding nonsense_mediated_decay MGP_LPJ_T0043048.1 MGP_LPJ_G0022433.1 mouse_genomes_project 16 10567956 10598787 + MGP_LPJ_P0043048 Bfar protein_coding protein_coding MGP_LPJ_T0043049.1 MGP_LPJ_G0022433.1 mouse_genomes_project 16 10567998 10581575 + Bfar protein_coding retained_intron MGP_LPJ_T0043050.1 MGP_LPJ_G0022433.1 mouse_genomes_project 16 10580827 10583500 + Bfar protein_coding retained_intron MGP_LPJ_T0043051.1 MGP_LPJ_G0022433.1 mouse_genomes_project 16 10581189 10583931 + Bfar protein_coding retained_intron MGP_LPJ_T0043052.1 MGP_LPJ_G0022433.1 mouse_genomes_project 16 10587773 10592691 + Bfar protein_coding retained_intron MGP_LPJ_T0100411.1 MGP_LPJ_G0038674.1 mouse_genomes_project 16 5036351 5036495 + Gm24579 snoRNA snoRNA MGP_LPJ_T0043672.1 MGP_LPJ_G0022571.1 mouse_genomes_project 16 19631357 19692043 - MGP_LPJ_P0043672 Etv5 protein_coding protein_coding MGP_LPJ_T0043673.1 MGP_LPJ_G0022571.1 mouse_genomes_project 16 19636527 19695128 - MGP_LPJ_P0043673 Etv5 protein_coding protein_coding MGP_LPJ_T0043674.1 MGP_LPJ_G0022571.1 mouse_genomes_project 16 19636636 19655925 - MGP_LPJ_P0043674 Etv5 protein_coding nonsense_mediated_decay MGP_LPJ_T0043675.1 MGP_LPJ_G0022571.1 mouse_genomes_project 16 19655959 19695118 - Etv5 protein_coding processed_transcript MGP_LPJ_T0043676.1 MGP_LPJ_G0022571.1 mouse_genomes_project 16 19667019 19695072 - MGP_LPJ_P0043676 Etv5 protein_coding protein_coding MGP_LPJ_T0042882.1 MGP_LPJ_G0022391.1 mouse_genomes_project 16 1767258 1781227 - MGP_LPJ_P0042882 Eef2kmt protein_coding protein_coding MGP_LPJ_T0042883.1 MGP_LPJ_G0022391.1 mouse_genomes_project 16 1768373 1781180 - MGP_LPJ_P0042883 Eef2kmt protein_coding unknown_likely_coding MGP_LPJ_T0042884.1 MGP_LPJ_G0022391.1 mouse_genomes_project 16 1768536 1781185 - Eef2kmt protein_coding retained_intron MGP_LPJ_T0042885.1 MGP_LPJ_G0022391.1 mouse_genomes_project 16 1772624 1781200 - MGP_LPJ_P0042885 Eef2kmt protein_coding protein_coding MGP_LPJ_T0042886.1 MGP_LPJ_G0022391.1 mouse_genomes_project 16 1772636 1774120 - Eef2kmt protein_coding retained_intron MGP_LPJ_T0042887.1 MGP_LPJ_G0022391.1 mouse_genomes_project 16 1774324 1781173 - Eef2kmt protein_coding retained_intron MGP_LPJ_T0042891.1 MGP_LPJ_G0022393.1 mouse_genomes_project 16 5042826 5064574 - MGP_LPJ_P0042891 Tmem114 protein_coding protein_coding MGP_LPJ_T0010132.1 MGP_LPJ_G0008250.1 mouse_genomes_project 16 14019105 14019202 - Mir301b miRNA miRNA MGP_LPJ_T0099204.1 MGP_LPJ_G0037467.1 mouse_genomes_project 16 95334070 95334230 + Gm23692 snRNA snRNA MGP_LPJ_T0010181.1 MGP_LPJ_G0008299.1 mouse_genomes_project 16 97022935 97023059 - Gm27833 miRNA miRNA MGP_LPJ_T0044920.1 MGP_LPJ_G0022940.1 mouse_genomes_project 16 91932736 91935864 + MGP_LPJ_P0044920 Olig2 protein_coding protein_coding MGP_LPJ_T0042845.1 MGP_LPJ_G0022378.1 mouse_genomes_project 16 1448591 1450501 + MGP_LPJ_P0042845 Nudt16l1 protein_coding protein_coding MGP_LPJ_T0042869.1 MGP_LPJ_G0022385.1 mouse_genomes_project 16 1572590 1611350 + MGP_LPJ_P0042869 Ubn1 protein_coding unknown_likely_coding MGP_LPJ_T0044840.1 MGP_LPJ_G0022914.1 mouse_genomes_project 16 89603586 89605307 - MGP_LPJ_P0044840 1110025L11Rik protein_coding protein_coding MGP_LPJ_T0044673.1 MGP_LPJ_G0022843.1 mouse_genomes_project 16 63759414 63760750 - MGP_LPJ_P0044673 Csnka2ip protein_coding protein_coding MGP_LPJ_T0010178.1 MGP_LPJ_G0008296.1 mouse_genomes_project 16 93888759 93888827 + Gm28003 miRNA miRNA MGP_LPJ_T0010169.1 MGP_LPJ_G0008287.1 mouse_genomes_project 16 75578259 75578371 + Gm22923 miRNA miRNA MGP_LPJ_T0099170.1 MGP_LPJ_G0037433.1 mouse_genomes_project 16 28559600 28559707 + Gm26295 snRNA snRNA MGP_LPJ_T0044638.1 MGP_LPJ_G0022831.1 mouse_genomes_project 16 58413857 58414862 - MGP_LPJ_P0044638 Olfr206 protein_coding protein_coding MGP_LPJ_T0043290.1 MGP_LPJ_G0022484.1 mouse_genomes_project 16 14481074 14491199 + MGP_LPJ_P0043290 P2rx6 protein_coding protein_coding MGP_LPJ_T0043291.1 MGP_LPJ_G0022484.1 mouse_genomes_project 16 14481074 14490288 + MGP_LPJ_P0043291 P2rx6 protein_coding protein_coding MGP_LPJ_T0043292.1 MGP_LPJ_G0022484.1 mouse_genomes_project 16 14481122 14496988 + MGP_LPJ_P0043292 P2rx6 protein_coding nonsense_mediated_decay MGP_LPJ_T0042905.1 MGP_LPJ_G0022397.1 mouse_genomes_project 16 5278964 5299858 + MGP_LPJ_P0042905 Pmm2 protein_coding protein_coding MGP_LPJ_T0042906.1 MGP_LPJ_G0022397.1 mouse_genomes_project 16 5279013 5291442 + Pmm2 protein_coding retained_intron MGP_LPJ_T0042907.1 MGP_LPJ_G0022397.1 mouse_genomes_project 16 5279028 5286306 + Pmm2 protein_coding retained_intron MGP_LPJ_T0042908.1 MGP_LPJ_G0022397.1 mouse_genomes_project 16 5279332 5293754 + Pmm2 protein_coding processed_transcript MGP_LPJ_T0042909.1 MGP_LPJ_G0022397.1 mouse_genomes_project 16 5287260 5291037 + Pmm2 protein_coding retained_intron MGP_LPJ_T0042910.1 MGP_LPJ_G0022397.1 mouse_genomes_project 16 5290918 5299069 + Pmm2 protein_coding retained_intron MGP_LPJ_T0043438.1 MGP_LPJ_G0022513.1 mouse_genomes_project 16 15489443 15555028 + MGP_LPJ_P0043438 Gnb1l protein_coding protein_coding MGP_LPJ_T0043439.1 MGP_LPJ_G0022513.1 mouse_genomes_project 16 15489498 15540653 + MGP_LPJ_P0043439 Gnb1l protein_coding protein_coding MGP_LPJ_T0043440.1 MGP_LPJ_G0022513.1 mouse_genomes_project 16 15489553 15540837 + Gnb1l protein_coding processed_transcript MGP_LPJ_T0043441.1 MGP_LPJ_G0022513.1 mouse_genomes_project 16 15489561 15540703 + MGP_LPJ_P0043441 Gnb1l protein_coding protein_coding MGP_LPJ_T0043442.1 MGP_LPJ_G0022513.1 mouse_genomes_project 16 15489561 15554976 + MGP_LPJ_P0043442 Gnb1l protein_coding nonsense_mediated_decay MGP_LPJ_T0043443.1 MGP_LPJ_G0022513.1 mouse_genomes_project 16 15489563 15555028 + MGP_LPJ_P0043443 Gnb1l protein_coding protein_coding MGP_LPJ_T0043444.1 MGP_LPJ_G0022513.1 mouse_genomes_project 16 15489563 15555028 + MGP_LPJ_P0043444 Gnb1l protein_coding protein_coding MGP_LPJ_T0043445.1 MGP_LPJ_G0022513.1 mouse_genomes_project 16 15489566 15540776 + Gnb1l protein_coding processed_transcript MGP_LPJ_T0043446.1 MGP_LPJ_G0022513.1 mouse_genomes_project 16 15489572 15532490 + MGP_LPJ_P0043446 Gnb1l protein_coding protein_coding MGP_LPJ_T0043448.1 MGP_LPJ_G0022513.1 mouse_genomes_project 16 15489577 15552887 + MGP_LPJ_P0043448 Gnb1l protein_coding nonsense_mediated_decay MGP_LPJ_T0043449.1 MGP_LPJ_G0022513.1 mouse_genomes_project 16 15537007 15540849 + Gnb1l protein_coding processed_transcript MGP_LPJ_T0099194.1 MGP_LPJ_G0037457.1 mouse_genomes_project 16 63009093 63009191 - Gm22769 snRNA snRNA MGP_LPJ_T0044655.1 MGP_LPJ_G0022837.1 mouse_genomes_project 16 58750610 59746418 - MGP_LPJ_P0044655 Epha6 protein_coding protein_coding MGP_LPJ_T0044656.1 MGP_LPJ_G0022837.1 mouse_genomes_project 16 58765968 59168431 - MGP_LPJ_P0044656 Epha6 protein_coding protein_coding MGP_LPJ_T0044657.1 MGP_LPJ_G0022837.1 mouse_genomes_project 16 59559954 59746701 - Epha6 protein_coding retained_intron MGP_LPJ_T0044658.1 MGP_LPJ_G0022837.1 mouse_genomes_project 16 59614765 59746389 - Epha6 protein_coding processed_transcript MGP_LPJ_T0044069.1 MGP_LPJ_G0022671.1 mouse_genomes_project 16 33592661 33708182 + Sema5b protein_coding retained_intron MGP_LPJ_T0044070.1 MGP_LPJ_G0022671.1 mouse_genomes_project 16 33592878 33729899 + MGP_LPJ_P0044070 Sema5b protein_coding protein_coding MGP_LPJ_T0044071.1 MGP_LPJ_G0022671.1 mouse_genomes_project 16 33593087 33729899 + MGP_LPJ_P0044071 Sema5b protein_coding protein_coding MGP_LPJ_T0044072.1 MGP_LPJ_G0022671.1 mouse_genomes_project 16 33721839 33722232 + Sema5b protein_coding retained_intron MGP_LPJ_T0044073.1 MGP_LPJ_G0022671.1 mouse_genomes_project 16 33722329 33730370 + MGP_LPJ_P0044073 Sema5b protein_coding protein_coding MGP_LPJ_T0044074.1 MGP_LPJ_G0022671.1 mouse_genomes_project 16 33723179 33724025 + Sema5b protein_coding retained_intron MGP_LPJ_T0044075.1 MGP_LPJ_G0022671.1 mouse_genomes_project 16 33726958 33728968 + MGP_LPJ_P0044075 Sema5b protein_coding protein_coding MGP_LPJ_T0044076.1 MGP_LPJ_G0022671.1 mouse_genomes_project 16 33728124 33729108 + Sema5b protein_coding retained_intron MGP_LPJ_T0001001.1 MGP_LPJ_G0000927.1 mouse_genomes_project 16 77405680 77408004 + TEC TEC MGP_LPJ_T0017429.1 MGP_LPJ_G0015229.1 mouse_genomes_project 16 15410244 15415434 + Gm15764 processed_transcript antisense MGP_LPJ_T0017430.1 MGP_LPJ_G0015229.1 mouse_genomes_project 16 15410447 15414803 + Gm15764 processed_transcript retained_intron MGP_LPJ_T0044484.1 MGP_LPJ_G0022776.1 mouse_genomes_project 16 48530374 48591996 + MGP_LPJ_P0044484 Cd47 protein_coding protein_coding MGP_LPJ_T0044485.1 MGP_LPJ_G0022776.1 mouse_genomes_project 16 48530543 48592005 + MGP_LPJ_P0044485 Cd47 protein_coding unknown_likely_coding MGP_LPJ_T0044486.1 MGP_LPJ_G0022776.1 mouse_genomes_project 16 48542745 48588094 + MGP_LPJ_P0044486 Cd47 protein_coding protein_coding MGP_LPJ_T0013139.1 MGP_LPJ_G0011230.1 mouse_genomes_project 16 16768608 16769275 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017432.1 MGP_LPJ_G0015231.1 mouse_genomes_project 16 19810026 19812623 + Gm15651 processed_transcript processed_transcript MGP_LPJ_T0013163.1 MGP_LPJ_G0011254.1 mouse_genomes_project 16 38154992 38155990 + processed_pseudogene processed_pseudogene MGP_LPJ_T0000988.1 MGP_LPJ_G0000915.1 mouse_genomes_project 16 38554335 38554774 + TEC TEC MGP_LPJ_T0010135.1 MGP_LPJ_G0008253.1 mouse_genomes_project 16 15277809 15277897 - Gm24572 miRNA miRNA MGP_LPJ_T0044948.1 MGP_LPJ_G0022949.1 mouse_genomes_project 16 92349530 92374830 - MGP_LPJ_P0044948 Gart protein_coding protein_coding MGP_LPJ_T0044949.1 MGP_LPJ_G0022949.1 mouse_genomes_project 16 92349737 92371269 - MGP_LPJ_P0044949 Gart protein_coding nonsense_mediated_decay MGP_LPJ_T0044950.1 MGP_LPJ_G0022949.1 mouse_genomes_project 16 92361555 92374813 - MGP_LPJ_P0044950 Gart protein_coding protein_coding MGP_LPJ_T0006878.1 MGP_LPJ_G0005672.1 mouse_genomes_project 16 56142035 56148748 + Gm16892 lincRNA lincRNA MGP_LPJ_T0001003.1 MGP_LPJ_G0000929.1 mouse_genomes_project 16 77486103 77488244 + TEC TEC MGP_LPJ_T0006853.1 MGP_LPJ_G0005652.1 mouse_genomes_project 16 19116442 19117298 - 2610020F03Rik lincRNA lincRNA MGP_LPJ_T0045203.1 MGP_LPJ_G0022991.1 mouse_genomes_project 16 97492725 97553451 + MGP_LPJ_P0045203 Pcp4 protein_coding protein_coding MGP_LPJ_T0010177.1 MGP_LPJ_G0008295.1 mouse_genomes_project 16 92683309 92683387 - Gm27773 miRNA miRNA MGP_LPJ_T0043891.1 MGP_LPJ_G0022629.1 mouse_genomes_project 16 29815852 29889000 - MGP_LPJ_P0043891 Pak2 protein_coding protein_coding MGP_LPJ_T0043892.1 MGP_LPJ_G0022629.1 mouse_genomes_project 16 29838587 29852890 - Pak2 protein_coding retained_intron MGP_LPJ_T0099182.1 MGP_LPJ_G0037445.1 mouse_genomes_project 16 36163868 36164008 + Gm25140 snRNA snRNA MGP_LPJ_T0043488.1 MGP_LPJ_G0022529.1 mouse_genomes_project 16 16564850 16566780 - MGP_LPJ_P0043488 protein_coding protein_coding MGP_LPJ_T0099191.1 MGP_LPJ_G0037454.1 mouse_genomes_project 16 54487258 54487365 - Gm23003 snRNA snRNA MGP_LPJ_T0044647.1 MGP_LPJ_G0022835.1 mouse_genomes_project 16 58576396 58613359 - Crybg3 protein_coding retained_intron MGP_LPJ_T0044648.1 MGP_LPJ_G0022835.1 mouse_genomes_project 16 58577709 58645741 - MGP_LPJ_P0044648 Crybg3 protein_coding protein_coding MGP_LPJ_T0044649.1 MGP_LPJ_G0022835.1 mouse_genomes_project 16 58614215 58627508 - Crybg3 protein_coding processed_transcript MGP_LPJ_T0044650.1 MGP_LPJ_G0022835.1 mouse_genomes_project 16 58631699 58643959 - MGP_LPJ_P0044650 Crybg3 protein_coding protein_coding MGP_LPJ_T0044144.1 MGP_LPJ_G0022694.1 mouse_genomes_project 16 34914890 35002607 - Eaf2 protein_coding processed_transcript MGP_LPJ_T0044145.1 MGP_LPJ_G0022694.1 mouse_genomes_project 16 34914891 35002607 - Eaf2 protein_coding processed_transcript MGP_LPJ_T0044146.1 MGP_LPJ_G0022694.1 mouse_genomes_project 16 34914892 34930958 - MGP_LPJ_P0044146 Eaf2 protein_coding protein_coding MGP_LPJ_T0044147.1 MGP_LPJ_G0022694.1 mouse_genomes_project 16 34914971 34952509 - Eaf2 protein_coding processed_transcript MGP_LPJ_T0044148.1 MGP_LPJ_G0022694.1 mouse_genomes_project 16 34915026 34952454 - MGP_LPJ_P0044148 Eaf2 protein_coding protein_coding MGP_LPJ_T0044149.1 MGP_LPJ_G0022694.1 mouse_genomes_project 16 34944820 35002418 - Eaf2 protein_coding retained_intron MGP_LPJ_T0043574.1 MGP_LPJ_G0022550.1 mouse_genomes_project 16 17680837 17688231 + MGP_LPJ_P0043574 Ece2 protein_coding protein_coding MGP_LPJ_T0043575.1 MGP_LPJ_G0022550.1 mouse_genomes_project 16 17680845 17716228 + MGP_LPJ_P0043575 Ece2 protein_coding protein_coding MGP_LPJ_T0043576.1 MGP_LPJ_G0022550.1 mouse_genomes_project 16 17680845 17688093 + MGP_LPJ_P0043576 Ece2 protein_coding protein_coding MGP_LPJ_T0043577.1 MGP_LPJ_G0022550.1 mouse_genomes_project 16 17680854 17716233 + MGP_LPJ_P0043577 Ece2 protein_coding protein_coding MGP_LPJ_T0043578.1 MGP_LPJ_G0022550.1 mouse_genomes_project 16 17681038 17716228 + MGP_LPJ_P0043578 Ece2 protein_coding protein_coding MGP_LPJ_T0043580.1 MGP_LPJ_G0022550.1 mouse_genomes_project 16 17699143 17716228 + MGP_LPJ_P0043580 Ece2 protein_coding protein_coding MGP_LPJ_T0043581.1 MGP_LPJ_G0022550.1 mouse_genomes_project 16 17699160 17713347 + Ece2 protein_coding retained_intron MGP_LPJ_T0043582.1 MGP_LPJ_G0022550.1 mouse_genomes_project 16 17699160 17716789 + MGP_LPJ_P0043582 Ece2 protein_coding protein_coding MGP_LPJ_T0043583.1 MGP_LPJ_G0022550.1 mouse_genomes_project 16 17699166 17716228 + MGP_LPJ_P0043583 Ece2 protein_coding protein_coding MGP_LPJ_T0043584.1 MGP_LPJ_G0022550.1 mouse_genomes_project 16 17700460 17708270 + Ece2 protein_coding retained_intron MGP_LPJ_T0043585.1 MGP_LPJ_G0022550.1 mouse_genomes_project 16 17703182 17716798 + MGP_LPJ_P0043585 Ece2 protein_coding protein_coding MGP_LPJ_T0044618.1 MGP_LPJ_G0022816.1 mouse_genomes_project 16 58047579 58048584 - MGP_LPJ_P0044618 Olfr186 protein_coding protein_coding MGP_LPJ_T0044619.1 MGP_LPJ_G0022816.1 mouse_genomes_project 16 58048176 58052224 - MGP_LPJ_P0044619 Olfr186 protein_coding protein_coding MGP_LPJ_T0044461.1 MGP_LPJ_G0022768.1 mouse_genomes_project 16 47355790 47397487 - MGP_LPJ_P0044461 Trat1 protein_coding protein_coding MGP_LPJ_T0044636.1 MGP_LPJ_G0022829.1 mouse_genomes_project 16 58389396 58390463 - MGP_LPJ_P0044636 Olfr204 protein_coding protein_coding MGP_LPJ_T0042709.1 MGP_LPJ_G0022349.1 mouse_genomes_project 16 50722 51664 + MGP_LPJ_P0042709 Olfr161 protein_coding protein_coding MGP_LPJ_T0099192.1 MGP_LPJ_G0037455.1 mouse_genomes_project 16 54673920 54674020 - Gm26369 snRNA snRNA MGP_LPJ_T0099198.1 MGP_LPJ_G0037461.1 mouse_genomes_project 16 80742581 80742680 + Gm24773 snRNA snRNA MGP_LPJ_T0045146.1 MGP_LPJ_G0022981.1 mouse_genomes_project 16 96663278 96681631 + MGP_LPJ_P0045146 Ets2 protein_coding protein_coding MGP_LPJ_T0045147.1 MGP_LPJ_G0022981.1 mouse_genomes_project 16 96663658 96671356 + Ets2 protein_coding retained_intron MGP_LPJ_T0045148.1 MGP_LPJ_G0022981.1 mouse_genomes_project 16 96663703 96673755 + Ets2 protein_coding retained_intron MGP_LPJ_T0045149.1 MGP_LPJ_G0022981.1 mouse_genomes_project 16 96667354 96676652 + MGP_LPJ_P0045149 Ets2 protein_coding protein_coding MGP_LPJ_T0045150.1 MGP_LPJ_G0022981.1 mouse_genomes_project 16 96676433 96679702 + Ets2 protein_coding retained_intron MGP_LPJ_T0043521.1 MGP_LPJ_G0022542.1 mouse_genomes_project 16 17362943 17378683 - protein_coding processed_transcript MGP_LPJ_T0043522.1 MGP_LPJ_G0022542.1 mouse_genomes_project 16 17362943 17378740 - MGP_LPJ_P0043522 protein_coding protein_coding MGP_LPJ_T0043523.1 MGP_LPJ_G0022542.1 mouse_genomes_project 16 17364226 17368767 - protein_coding processed_transcript MGP_LPJ_T0043524.1 MGP_LPJ_G0022542.1 mouse_genomes_project 16 17364332 17371307 - MGP_LPJ_P0043524 protein_coding protein_coding MGP_LPJ_T0043525.1 MGP_LPJ_G0022542.1 mouse_genomes_project 16 17369576 17370608 - protein_coding processed_transcript MGP_LPJ_T0044444.1 MGP_LPJ_G0022761.1 mouse_genomes_project 16 44518080 44573515 - MGP_LPJ_P0044444 Plcxd2 protein_coding protein_coding MGP_LPJ_T0045046.1 MGP_LPJ_G0022965.1 mouse_genomes_project 16 94466912 94469576 + MGP_LPJ_P0045046 Cbr1 protein_coding protein_coding MGP_LPJ_T0099177.1 MGP_LPJ_G0037440.1 mouse_genomes_project 16 34413700 34413805 + Gm23306 snRNA snRNA MGP_LPJ_T0042726.1 MGP_LPJ_G0022356.1 mouse_genomes_project 16 337539 373867 + MGP_LPJ_P0042726 Gm20695 protein_coding protein_coding MGP_LPJ_T0042736.1 MGP_LPJ_G0022356.1 mouse_genomes_project 16 351677 373836 + Gm20695 protein_coding processed_transcript MGP_LPJ_T0045193.1 MGP_LPJ_G0022989.1 mouse_genomes_project 16 97387889 97442595 + MGP_LPJ_P0045193 Igsf5 protein_coding protein_coding MGP_LPJ_T0045194.1 MGP_LPJ_G0022989.1 mouse_genomes_project 16 97388015 97429173 + MGP_LPJ_P0045194 Igsf5 protein_coding protein_coding MGP_LPJ_T0045195.1 MGP_LPJ_G0022989.1 mouse_genomes_project 16 97388015 97429176 + MGP_LPJ_P0045195 Igsf5 protein_coding protein_coding MGP_LPJ_T0045196.1 MGP_LPJ_G0022989.1 mouse_genomes_project 16 97388015 97553238 + MGP_LPJ_P0045196 Igsf5 protein_coding protein_coding MGP_LPJ_T0045197.1 MGP_LPJ_G0022989.1 mouse_genomes_project 16 97411151 97428473 + Igsf5 protein_coding processed_transcript MGP_LPJ_T0045198.1 MGP_LPJ_G0022989.1 mouse_genomes_project 16 97420590 97442428 + MGP_LPJ_P0045198 Igsf5 protein_coding protein_coding MGP_LPJ_T0013105.1 MGP_LPJ_G0011196.1 mouse_genomes_project 16 382603 382916 + processed_pseudogene processed_pseudogene MGP_LPJ_T0043929.1 MGP_LPJ_G0022641.1 mouse_genomes_project 16 30269693 30293665 + Pcyt1a protein_coding retained_intron MGP_LPJ_T0043930.1 MGP_LPJ_G0022641.1 mouse_genomes_project 16 30269715 30296853 + Pcyt1a protein_coding retained_intron MGP_LPJ_T0043931.1 MGP_LPJ_G0022641.1 mouse_genomes_project 16 30269768 30318631 + MGP_LPJ_P0043931 Pcyt1a protein_coding protein_coding MGP_LPJ_T0043932.1 MGP_LPJ_G0022641.1 mouse_genomes_project 16 30269775 30296723 + Pcyt1a protein_coding retained_intron MGP_LPJ_T0043363.1 MGP_LPJ_G0022500.1 mouse_genomes_project 16 14960097 14962047 + MGP_LPJ_P0043363 protein_coding protein_coding MGP_LPJ_T0043977.1 MGP_LPJ_G0022650.1 mouse_genomes_project 16 30765032 30780792 + Fyttd1 protein_coding processed_transcript MGP_LPJ_T0043978.1 MGP_LPJ_G0022650.1 mouse_genomes_project 16 30765313 30800274 + MGP_LPJ_P0043978 Fyttd1 protein_coding protein_coding MGP_LPJ_T0043979.1 MGP_LPJ_G0022650.1 mouse_genomes_project 16 30765316 30800362 + MGP_LPJ_P0043979 Fyttd1 protein_coding protein_coding MGP_LPJ_T0043980.1 MGP_LPJ_G0022650.1 mouse_genomes_project 16 30765345 30786659 + Fyttd1 protein_coding retained_intron MGP_LPJ_T0043981.1 MGP_LPJ_G0022650.1 mouse_genomes_project 16 30765345 30788659 + Fyttd1 protein_coding processed_transcript MGP_LPJ_T0043982.1 MGP_LPJ_G0022650.1 mouse_genomes_project 16 30765383 30790260 + Fyttd1 protein_coding retained_intron MGP_LPJ_T0043983.1 MGP_LPJ_G0022650.1 mouse_genomes_project 16 30770555 30797031 + MGP_LPJ_P0043983 Fyttd1 protein_coding protein_coding MGP_LPJ_T0043984.1 MGP_LPJ_G0022650.1 mouse_genomes_project 16 30786493 30797180 + Fyttd1 protein_coding processed_transcript MGP_LPJ_T0043985.1 MGP_LPJ_G0022650.1 mouse_genomes_project 16 30790158 30797103 + Fyttd1 protein_coding retained_intron MGP_LPJ_T0043986.1 MGP_LPJ_G0022650.1 mouse_genomes_project 16 30791632 30797039 + Fyttd1 protein_coding retained_intron MGP_LPJ_T0043987.1 MGP_LPJ_G0022650.1 mouse_genomes_project 16 30793507 30797005 + Fyttd1 protein_coding retained_intron MGP_LPJ_T0044703.1 MGP_LPJ_G0022856.1 mouse_genomes_project 16 73614752 74154926 - MGP_LPJ_P0044703 Robo2 protein_coding unknown_likely_coding MGP_LPJ_T0044704.1 MGP_LPJ_G0022856.1 mouse_genomes_project 16 73615000 74155003 - MGP_LPJ_P0044704 Robo2 protein_coding protein_coding MGP_LPJ_T0044705.1 MGP_LPJ_G0022856.1 mouse_genomes_project 16 73617049 74155306 - MGP_LPJ_P0044705 Robo2 protein_coding protein_coding MGP_LPJ_T0044706.1 MGP_LPJ_G0022856.1 mouse_genomes_project 16 73617358 73622582 - Robo2 protein_coding retained_intron MGP_LPJ_T0044707.1 MGP_LPJ_G0022856.1 mouse_genomes_project 16 73619725 73630721 - Robo2 protein_coding processed_transcript MGP_LPJ_T0044708.1 MGP_LPJ_G0022856.1 mouse_genomes_project 16 73647983 74155799 - MGP_LPJ_P0044708 Robo2 protein_coding protein_coding MGP_LPJ_T0044709.1 MGP_LPJ_G0022856.1 mouse_genomes_project 16 73648238 73662918 - Robo2 protein_coding retained_intron MGP_LPJ_T0044710.1 MGP_LPJ_G0022856.1 mouse_genomes_project 16 73714973 73755811 - Robo2 protein_coding processed_transcript MGP_LPJ_T0044711.1 MGP_LPJ_G0022856.1 mouse_genomes_project 16 73772258 74155451 - Robo2 protein_coding retained_intron MGP_LPJ_T0044712.1 MGP_LPJ_G0022856.1 mouse_genomes_project 16 74095570 74155839 - Robo2 protein_coding retained_intron MGP_LPJ_T0044600.1 MGP_LPJ_G0022809.1 mouse_genomes_project 16 57707463 57713806 + MGP_LPJ_P0044600 Cldnd1 protein_coding protein_coding MGP_LPJ_T0044601.1 MGP_LPJ_G0022809.1 mouse_genomes_project 16 57707478 57713163 + MGP_LPJ_P0044601 Cldnd1 protein_coding protein_coding MGP_LPJ_T0044602.1 MGP_LPJ_G0022809.1 mouse_genomes_project 16 57707576 57712544 + MGP_LPJ_P0044602 Cldnd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0044603.1 MGP_LPJ_G0022809.1 mouse_genomes_project 16 57707592 57712463 + Cldnd1 protein_coding processed_transcript MGP_LPJ_T0044604.1 MGP_LPJ_G0022809.1 mouse_genomes_project 16 57707601 57710934 + MGP_LPJ_P0044604 Cldnd1 protein_coding protein_coding MGP_LPJ_T0044605.1 MGP_LPJ_G0022809.1 mouse_genomes_project 16 57711818 57712535 + Cldnd1 protein_coding retained_intron MGP_LPJ_T0044718.1 MGP_LPJ_G0022859.1 mouse_genomes_project 16 75569138 75580761 - MGP_LPJ_P0044718 Hspa13 protein_coding protein_coding MGP_LPJ_T0044719.1 MGP_LPJ_G0022859.1 mouse_genomes_project 16 75570588 75580731 - MGP_LPJ_P0044719 Hspa13 protein_coding protein_coding MGP_LPJ_T0044720.1 MGP_LPJ_G0022859.1 mouse_genomes_project 16 75573136 75580722 - Hspa13 protein_coding retained_intron MGP_LPJ_T0043501.1 MGP_LPJ_G0022536.1 mouse_genomes_project 16 16917849 16925209 - MGP_LPJ_P0043501 A930003A15Rik protein_coding protein_coding MGP_LPJ_T0098001.1 MGP_LPJ_G0036282.1 mouse_genomes_project 16 89257906 89258536 + pseudogene pseudogene MGP_LPJ_T0043653.1 MGP_LPJ_G0022563.1 mouse_genomes_project 16 18948918 18977735 - MGP_LPJ_P0043653 Ehhadh protein_coding protein_coding MGP_LPJ_T0000998.1 MGP_LPJ_G0000924.1 mouse_genomes_project 16 77279204 77281774 - TEC TEC MGP_LPJ_T0099172.1 MGP_LPJ_G0037435.1 mouse_genomes_project 16 33423190 33423343 - Gm23518 snRNA snRNA MGP_LPJ_T0044399.1 MGP_LPJ_G0022750.1 mouse_genomes_project 16 43672425 43702149 + MGP_LPJ_P0044399 Atg3 protein_coding protein_coding MGP_LPJ_T0044400.1 MGP_LPJ_G0022750.1 mouse_genomes_project 16 43679505 43701504 + Atg3 protein_coding retained_intron MGP_LPJ_T0006843.1 MGP_LPJ_G0005645.1 mouse_genomes_project 16 10406392 10412681 - 2310015D24Rik lincRNA lincRNA MGP_LPJ_T0006844.1 MGP_LPJ_G0005645.1 mouse_genomes_project 16 10411454 10413369 - 2310015D24Rik lincRNA lincRNA MGP_LPJ_T0044821.1 MGP_LPJ_G0022897.1 mouse_genomes_project 16 89274816 89275991 - MGP_LPJ_P0044821 2310057N15Rik protein_coding protein_coding MGP_LPJ_T0044236.1 MGP_LPJ_G0022719.1 mouse_genomes_project 16 36736605 36763978 - MGP_LPJ_P0044236 Poglut1 protein_coding protein_coding MGP_LPJ_T0044237.1 MGP_LPJ_G0022719.1 mouse_genomes_project 16 36736608 36763942 - Poglut1 protein_coding retained_intron MGP_LPJ_T0044238.1 MGP_LPJ_G0022719.1 mouse_genomes_project 16 36738093 36763925 - MGP_LPJ_P0044238 Poglut1 protein_coding unknown_likely_coding MGP_LPJ_T0044239.1 MGP_LPJ_G0022719.1 mouse_genomes_project 16 36740946 36743978 - Poglut1 protein_coding retained_intron MGP_LPJ_T0044240.1 MGP_LPJ_G0022719.1 mouse_genomes_project 16 36745582 36749451 - Poglut1 protein_coding retained_intron MGP_LPJ_T0044241.1 MGP_LPJ_G0022719.1 mouse_genomes_project 16 36761739 36763942 - Poglut1 protein_coding retained_intron MGP_LPJ_T0042939.1 MGP_LPJ_G0022406.1 mouse_genomes_project 16 7109175 7153369 - MGP_LPJ_P0042939 Tekt5 protein_coding protein_coding MGP_LPJ_T0042940.1 MGP_LPJ_G0022406.1 mouse_genomes_project 16 7112363 7153327 - MGP_LPJ_P0042940 Tekt5 protein_coding protein_coding MGP_LPJ_T0098190.1 MGP_LPJ_G0036471.1 mouse_genomes_project 16 47023719 47023838 - n-R5s36 rRNA rRNA MGP_LPJ_T0045214.1 MGP_LPJ_G0022997.1 mouse_genomes_project 16 98846904 98867554 - MGP_LPJ_P0045214 Ripk4 protein_coding protein_coding MGP_LPJ_T0042848.1 MGP_LPJ_G0022381.1 mouse_genomes_project 16 1498562 1509610 - MGP_LPJ_P0042848 Sept12 protein_coding protein_coding MGP_LPJ_T0006847.1 MGP_LPJ_G0005648.1 mouse_genomes_project 16 16239698 16263629 - Gm43388 lincRNA lincRNA MGP_LPJ_T0044834.1 MGP_LPJ_G0022908.1 mouse_genomes_project 16 89472810 89473411 - MGP_LPJ_P0044834 Krtap16-3 protein_coding protein_coding MGP_LPJ_T0044812.1 MGP_LPJ_G0022888.1 mouse_genomes_project 16 89049515 89051869 - MGP_LPJ_P0044812 Cldn8 protein_coding protein_coding MGP_LPJ_T0044777.1 MGP_LPJ_G0022879.1 mouse_genomes_project 16 87758319 87772211 + MGP_LPJ_P0044777 N6amt1 protein_coding protein_coding MGP_LPJ_T0044778.1 MGP_LPJ_G0022879.1 mouse_genomes_project 16 87758336 87770310 + MGP_LPJ_P0044778 N6amt1 protein_coding protein_coding MGP_LPJ_T0044779.1 MGP_LPJ_G0022879.1 mouse_genomes_project 16 87758338 87772325 + MGP_LPJ_P0044779 N6amt1 protein_coding protein_coding MGP_LPJ_T0017431.1 MGP_LPJ_G0015230.1 mouse_genomes_project 16 17576635 17583435 - Gm16618 processed_transcript processed_transcript MGP_LPJ_T0043422.1 MGP_LPJ_G0022512.1 mouse_genomes_project 16 15419815 15473103 + MGP_LPJ_P0043422 Txnrd2 protein_coding protein_coding MGP_LPJ_T0043423.1 MGP_LPJ_G0022512.1 mouse_genomes_project 16 15419848 15473109 + MGP_LPJ_P0043423 Txnrd2 protein_coding protein_coding MGP_LPJ_T0043424.1 MGP_LPJ_G0022512.1 mouse_genomes_project 16 15419848 15473106 + MGP_LPJ_P0043424 Txnrd2 protein_coding protein_coding MGP_LPJ_T0043425.1 MGP_LPJ_G0022512.1 mouse_genomes_project 16 15419869 15473103 + MGP_LPJ_P0043425 Txnrd2 protein_coding protein_coding MGP_LPJ_T0043426.1 MGP_LPJ_G0022512.1 mouse_genomes_project 16 15419869 15450516 + MGP_LPJ_P0043426 Txnrd2 protein_coding protein_coding MGP_LPJ_T0043427.1 MGP_LPJ_G0022512.1 mouse_genomes_project 16 15419869 15473103 + MGP_LPJ_P0043427 Txnrd2 protein_coding protein_coding MGP_LPJ_T0043428.1 MGP_LPJ_G0022512.1 mouse_genomes_project 16 15419872 15473107 + MGP_LPJ_P0043428 Txnrd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0043429.1 MGP_LPJ_G0022512.1 mouse_genomes_project 16 15419876 15473106 + MGP_LPJ_P0043429 Txnrd2 protein_coding protein_coding MGP_LPJ_T0043430.1 MGP_LPJ_G0022512.1 mouse_genomes_project 16 15419893 15430995 + MGP_LPJ_P0043430 Txnrd2 protein_coding protein_coding MGP_LPJ_T0043431.1 MGP_LPJ_G0022512.1 mouse_genomes_project 16 15422128 15430993 + MGP_LPJ_P0043431 Txnrd2 protein_coding protein_coding MGP_LPJ_T0043432.1 MGP_LPJ_G0022512.1 mouse_genomes_project 16 15422356 15437091 + MGP_LPJ_P0043432 Txnrd2 protein_coding protein_coding MGP_LPJ_T0043433.1 MGP_LPJ_G0022512.1 mouse_genomes_project 16 15434685 15436334 + MGP_LPJ_P0043433 Txnrd2 protein_coding protein_coding MGP_LPJ_T0043434.1 MGP_LPJ_G0022512.1 mouse_genomes_project 16 15446086 15468725 + Txnrd2 protein_coding processed_transcript MGP_LPJ_T0043435.1 MGP_LPJ_G0022512.1 mouse_genomes_project 16 15446092 15468771 + Txnrd2 protein_coding processed_transcript MGP_LPJ_T0043436.1 MGP_LPJ_G0022512.1 mouse_genomes_project 16 15465856 15468734 + Txnrd2 protein_coding processed_transcript MGP_LPJ_T0043437.1 MGP_LPJ_G0022512.1 mouse_genomes_project 16 15465886 15468723 + Txnrd2 protein_coding processed_transcript MGP_LPJ_T0013146.1 MGP_LPJ_G0011237.1 mouse_genomes_project 16 20559594 20560621 - processed_pseudogene processed_pseudogene MGP_LPJ_T0043570.1 MGP_LPJ_G0022549.1 mouse_genomes_project 16 17674695 17680013 - MGP_LPJ_P0043570 Alg3 protein_coding protein_coding MGP_LPJ_T0043571.1 MGP_LPJ_G0022549.1 mouse_genomes_project 16 17674716 17679976 - MGP_LPJ_P0043571 Alg3 protein_coding nonsense_mediated_decay MGP_LPJ_T0043572.1 MGP_LPJ_G0022549.1 mouse_genomes_project 16 17674717 17679992 - MGP_LPJ_P0043572 Alg3 protein_coding nonsense_mediated_decay MGP_LPJ_T0043573.1 MGP_LPJ_G0022549.1 mouse_genomes_project 16 17677986 17679997 - Alg3 protein_coding processed_transcript MGP_LPJ_T0042871.1 MGP_LPJ_G0022387.1 mouse_genomes_project 16 1671710 1715371 + MGP_LPJ_P0042871 Sec14l5 protein_coding unknown_likely_coding MGP_LPJ_T0013132.1 MGP_LPJ_G0011223.1 mouse_genomes_project 16 14637175 14637613 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013123.1 MGP_LPJ_G0011214.1 mouse_genomes_project 16 10957802 10958309 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098184.1 MGP_LPJ_G0036465.1 mouse_genomes_project 16 10886505 10886615 - Gm26213 rRNA rRNA MGP_LPJ_T0042718.1 MGP_LPJ_G0022352.1 mouse_genomes_project 16 291516 292455 + MGP_LPJ_P0042718 Olfr15 protein_coding protein_coding MGP_LPJ_T0043579.1 MGP_LPJ_G0022551.1 mouse_genomes_project 16 17688438 17690511 - MGP_LPJ_P0043579 Camk2n2 protein_coding protein_coding MGP_LPJ_T0101284.1 MGP_LPJ_G0039514.1 mouse_genomes_project 16 76665047 76691630 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101285.1 MGP_LPJ_G0039514.1 mouse_genomes_project 16 76666830 76667179 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0013117.1 MGP_LPJ_G0011208.1 mouse_genomes_project 16 7993629 7994596 - processed_pseudogene processed_pseudogene MGP_LPJ_T0043878.1 MGP_LPJ_G0022625.1 mouse_genomes_project 16 29727085 29739860 + MGP_LPJ_P0043878 Pigz protein_coding protein_coding MGP_LPJ_T0043879.1 MGP_LPJ_G0022625.1 mouse_genomes_project 16 29727177 29738162 + Pigz protein_coding processed_transcript MGP_LPJ_T0043880.1 MGP_LPJ_G0022625.1 mouse_genomes_project 16 29727216 29736446 + Pigz protein_coding processed_transcript MGP_LPJ_T0043881.1 MGP_LPJ_G0022625.1 mouse_genomes_project 16 29735840 29736442 + Pigz protein_coding processed_transcript MGP_LPJ_T0013111.1 MGP_LPJ_G0011202.1 mouse_genomes_project 16 5263099 5263634 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100454.1 MGP_LPJ_G0038717.1 mouse_genomes_project 16 85474925 85475078 + Gm27295 snoRNA snoRNA MGP_LPJ_T0000996.1 MGP_LPJ_G0000922.1 mouse_genomes_project 16 77273548 77274822 + TEC TEC MGP_LPJ_T0042843.1 MGP_LPJ_G0022377.1 mouse_genomes_project 16 1395700 1447777 + MGP_LPJ_P0042843 Mgrn1 protein_coding protein_coding MGP_LPJ_T0042844.1 MGP_LPJ_G0022377.1 mouse_genomes_project 16 1395700 1447777 + MGP_LPJ_P0042844 Mgrn1 protein_coding protein_coding MGP_LPJ_T0044083.1 MGP_LPJ_G0022675.1 mouse_genomes_project 16 34009478 34022005 - MGP_LPJ_P0044083 Dtx3l protein_coding protein_coding MGP_LPJ_T0044084.1 MGP_LPJ_G0022675.1 mouse_genomes_project 16 34014713 34022005 - MGP_LPJ_P0044084 Dtx3l protein_coding protein_coding MGP_LPJ_T0006861.1 MGP_LPJ_G0005660.1 mouse_genomes_project 16 31312704 31313577 - 1700007L15Rik lincRNA lincRNA MGP_LPJ_T0043118.1 MGP_LPJ_G0022449.1 mouse_genomes_project 16 11658319 11661863 + MGP_LPJ_P0043118 Snai2 protein_coding protein_coding MGP_LPJ_T0045151.1 MGP_LPJ_G0022982.1 mouse_genomes_project 16 96955167 96966751 - MGP_LPJ_P0045151 Psmg1 protein_coding protein_coding MGP_LPJ_T0045152.1 MGP_LPJ_G0022982.1 mouse_genomes_project 16 96955271 96966681 - MGP_LPJ_P0045152 Psmg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0045153.1 MGP_LPJ_G0022982.1 mouse_genomes_project 16 96955271 96966681 - MGP_LPJ_P0045153 Psmg1 protein_coding protein_coding MGP_LPJ_T0045154.1 MGP_LPJ_G0022982.1 mouse_genomes_project 16 96963776 96965689 - Psmg1 protein_coding retained_intron MGP_LPJ_T0044811.1 MGP_LPJ_G0022887.1 mouse_genomes_project 16 88997224 88998436 - MGP_LPJ_P0044811 Cldn17 protein_coding protein_coding MGP_LPJ_T0042847.1 MGP_LPJ_G0022380.1 mouse_genomes_project 16 1479650 1489655 + MGP_LPJ_P0042847 4930451G09Rik protein_coding protein_coding MGP_LPJ_T0099196.1 MGP_LPJ_G0037459.1 mouse_genomes_project 16 73129987 73130154 - Gm25699 snRNA snRNA MGP_LPJ_T0013171.1 MGP_LPJ_G0011262.1 mouse_genomes_project 16 46808094 46808694 + processed_pseudogene processed_pseudogene MGP_LPJ_T0043750.1 MGP_LPJ_G0022593.1 mouse_genomes_project 16 23167698 23315092 + MGP_LPJ_P0043750 Trp63 protein_coding protein_coding MGP_LPJ_T0043751.1 MGP_LPJ_G0022593.1 mouse_genomes_project 16 23167700 23372703 + MGP_LPJ_P0043751 Trp63 protein_coding protein_coding MGP_LPJ_T0043752.1 MGP_LPJ_G0022593.1 mouse_genomes_project 16 23168225 23384863 + MGP_LPJ_P0043752 Trp63 protein_coding protein_coding MGP_LPJ_T0043753.1 MGP_LPJ_G0022593.1 mouse_genomes_project 16 23295656 23387661 + MGP_LPJ_P0043753 Trp63 protein_coding protein_coding MGP_LPJ_T0043754.1 MGP_LPJ_G0022593.1 mouse_genomes_project 16 23295656 23387661 + MGP_LPJ_P0043754 Trp63 protein_coding protein_coding MGP_LPJ_T0043755.1 MGP_LPJ_G0022593.1 mouse_genomes_project 16 23295656 23372703 + MGP_LPJ_P0043755 Trp63 protein_coding protein_coding MGP_LPJ_T0043756.1 MGP_LPJ_G0022593.1 mouse_genomes_project 16 23295656 23363396 + MGP_LPJ_P0043756 Trp63 protein_coding protein_coding MGP_LPJ_T0044375.1 MGP_LPJ_G0022747.1 mouse_genomes_project 16 43459084 43481251 + MGP_LPJ_P0044375 Cd200r3 protein_coding protein_coding MGP_LPJ_T0044376.1 MGP_LPJ_G0022747.1 mouse_genomes_project 16 43459084 43481251 + MGP_LPJ_P0044376 Cd200r3 protein_coding protein_coding MGP_LPJ_T0044377.1 MGP_LPJ_G0022747.1 mouse_genomes_project 16 43459084 43482644 + MGP_LPJ_P0044377 Cd200r3 protein_coding protein_coding MGP_LPJ_T0044378.1 MGP_LPJ_G0022747.1 mouse_genomes_project 16 43459084 43481937 + MGP_LPJ_P0044378 Cd200r3 protein_coding protein_coding MGP_LPJ_T0044379.1 MGP_LPJ_G0022747.1 mouse_genomes_project 16 43459084 43481937 + MGP_LPJ_P0044379 Cd200r3 protein_coding protein_coding MGP_LPJ_T0044380.1 MGP_LPJ_G0022747.1 mouse_genomes_project 16 43459098 43498680 + MGP_LPJ_P0044380 Cd200r3 protein_coding protein_coding MGP_LPJ_T0044381.1 MGP_LPJ_G0022747.1 mouse_genomes_project 16 43459112 43498652 + MGP_LPJ_P0044381 Cd200r3 protein_coding protein_coding MGP_LPJ_T0044382.1 MGP_LPJ_G0022747.1 mouse_genomes_project 16 43459148 43482859 + MGP_LPJ_P0044382 Cd200r3 protein_coding protein_coding MGP_LPJ_T0044383.1 MGP_LPJ_G0022747.1 mouse_genomes_project 16 43459155 43477436 + MGP_LPJ_P0044383 Cd200r3 protein_coding protein_coding MGP_LPJ_T0044384.1 MGP_LPJ_G0022747.1 mouse_genomes_project 16 43481822 43483423 + Cd200r3 protein_coding retained_intron MGP_LPJ_T0044693.1 MGP_LPJ_G0022852.1 mouse_genomes_project 16 69475193 69480864 - MGP_LPJ_P0044693 protein_coding protein_coding MGP_LPJ_T0044103.1 MGP_LPJ_G0022680.1 mouse_genomes_project 16 34167788 34188185 + MGP_LPJ_P0044103 Ccdc58 protein_coding protein_coding MGP_LPJ_T0044104.1 MGP_LPJ_G0022680.1 mouse_genomes_project 16 34167788 34188185 + MGP_LPJ_P0044104 Ccdc58 protein_coding protein_coding MGP_LPJ_T0044105.1 MGP_LPJ_G0022680.1 mouse_genomes_project 16 34177404 34188185 + MGP_LPJ_P0044105 Ccdc58 protein_coding protein_coding MGP_LPJ_T0043099.1 MGP_LPJ_G0022444.1 mouse_genomes_project 16 11125029 11230442 - MGP_LPJ_P0043099 Myh11 protein_coding protein_coding MGP_LPJ_T0043100.1 MGP_LPJ_G0022444.1 mouse_genomes_project 16 11125554 11210833 - MGP_LPJ_P0043100 Myh11 protein_coding unknown_likely_coding MGP_LPJ_T0006872.1 MGP_LPJ_G0005670.1 mouse_genomes_project 16 49436432 49450858 - Dubr lincRNA lincRNA MGP_LPJ_T0006873.1 MGP_LPJ_G0005670.1 mouse_genomes_project 16 49436437 49450768 - Dubr lincRNA lincRNA MGP_LPJ_T0006874.1 MGP_LPJ_G0005670.1 mouse_genomes_project 16 49444817 49450822 - Dubr lincRNA lincRNA MGP_LPJ_T0006875.1 MGP_LPJ_G0005670.1 mouse_genomes_project 16 49445504 49450773 - Dubr lincRNA lincRNA MGP_LPJ_T0000983.1 MGP_LPJ_G0000910.1 mouse_genomes_project 16 14893735 14894901 + TEC TEC MGP_LPJ_T0006841.1 MGP_LPJ_G0005643.1 mouse_genomes_project 16 8016400 8038765 + 2610020C07Rik lincRNA lincRNA MGP_LPJ_T0099158.1 MGP_LPJ_G0037421.1 mouse_genomes_project 16 13893873 13893968 - Gm22558 snRNA snRNA MGP_LPJ_T0013187.1 MGP_LPJ_G0011278.1 mouse_genomes_project 16 79872429 79872859 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006839.1 MGP_LPJ_G0005641.1 mouse_genomes_project 16 7807270 7813397 + Gm4262 lincRNA lincRNA MGP_LPJ_T0013106.1 MGP_LPJ_G0011197.1 mouse_genomes_project 16 383788 384354 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006871.1 MGP_LPJ_G0005669.1 mouse_genomes_project 16 49235819 49267168 + G730013B05Rik lincRNA lincRNA MGP_LPJ_T0006864.1 MGP_LPJ_G0005663.1 mouse_genomes_project 16 36659871 36661382 + D930030I03Rik lincRNA lincRNA MGP_LPJ_T0013148.1 MGP_LPJ_G0011239.1 mouse_genomes_project 16 23211681 23212602 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100439.1 MGP_LPJ_G0038702.1 mouse_genomes_project 16 53180780 53180912 + Gm25853 snoRNA snoRNA MGP_LPJ_T0044017.1 MGP_LPJ_G0022658.1 mouse_genomes_project 16 31462574 31613555 + MGP_LPJ_P0044017 Slc12a8 protein_coding protein_coding MGP_LPJ_T0044018.1 MGP_LPJ_G0022658.1 mouse_genomes_project 16 31543810 31613549 + MGP_LPJ_P0044018 Slc12a8 protein_coding protein_coding MGP_LPJ_T0044019.1 MGP_LPJ_G0022658.1 mouse_genomes_project 16 31564732 31573816 + Slc12a8 protein_coding processed_transcript MGP_LPJ_T0006880.1 MGP_LPJ_G0005674.1 mouse_genomes_project 16 58548850 58554960 - 1700022E09Rik lincRNA lincRNA MGP_LPJ_T0006881.1 MGP_LPJ_G0005674.1 mouse_genomes_project 16 58552680 58554994 - 1700022E09Rik lincRNA lincRNA MGP_LPJ_T0042827.1 MGP_LPJ_G0022374.1 mouse_genomes_project 16 1253983 1273817 - MGP_LPJ_P0042827 Cdip1 protein_coding protein_coding MGP_LPJ_T0042830.1 MGP_LPJ_G0022374.1 mouse_genomes_project 16 1269180 1294019 - MGP_LPJ_P0042830 Cdip1 protein_coding protein_coding MGP_LPJ_T0042831.1 MGP_LPJ_G0022374.1 mouse_genomes_project 16 1270560 1275493 - Cdip1 protein_coding retained_intron MGP_LPJ_T0042832.1 MGP_LPJ_G0022374.1 mouse_genomes_project 16 1270560 1294321 - MGP_LPJ_P0042832 Cdip1 protein_coding protein_coding MGP_LPJ_T0042833.1 MGP_LPJ_G0022374.1 mouse_genomes_project 16 1271058 1293959 - MGP_LPJ_P0042833 Cdip1 protein_coding protein_coding MGP_LPJ_T0042834.1 MGP_LPJ_G0022374.1 mouse_genomes_project 16 1273028 1294295 - Cdip1 protein_coding retained_intron MGP_LPJ_T0043723.1 MGP_LPJ_G0022581.1 mouse_genomes_project 16 20469383 20483119 - MGP_LPJ_P0043723 Rfc4 protein_coding protein_coding MGP_LPJ_T0043724.1 MGP_LPJ_G0022581.1 mouse_genomes_project 16 20469391 20483099 - MGP_LPJ_P0043724 Rfc4 protein_coding protein_coding MGP_LPJ_T0043725.1 MGP_LPJ_G0022581.1 mouse_genomes_project 16 20469435 20470185 - Rfc4 protein_coding retained_intron MGP_LPJ_T0043726.1 MGP_LPJ_G0022581.1 mouse_genomes_project 16 20470147 20483073 - MGP_LPJ_P0043726 Rfc4 protein_coding nonsense_mediated_decay MGP_LPJ_T0043727.1 MGP_LPJ_G0022581.1 mouse_genomes_project 16 20476349 20483110 - MGP_LPJ_P0043727 Rfc4 protein_coding protein_coding MGP_LPJ_T0003668.1 MGP_LPJ_G0003323.1 mouse_genomes_project 16 14047731 14048806 + Gm15648 antisense antisense MGP_LPJ_T0100417.1 MGP_LPJ_G0038680.1 mouse_genomes_project 16 17757047 17757122 + Snord66 snoRNA snoRNA MGP_LPJ_T0044328.1 MGP_LPJ_G0022736.1 mouse_genomes_project 16 42584353 42610076 + MGP_LPJ_P0044328 Naa50 protein_coding protein_coding MGP_LPJ_T0044329.1 MGP_LPJ_G0022736.1 mouse_genomes_project 16 42584376 42610968 + MGP_LPJ_P0044329 Naa50 protein_coding protein_coding MGP_LPJ_T0044330.1 MGP_LPJ_G0022736.1 mouse_genomes_project 16 42584409 42610074 + MGP_LPJ_P0044330 Naa50 protein_coding protein_coding MGP_LPJ_T0044331.1 MGP_LPJ_G0022736.1 mouse_genomes_project 16 42584415 42608772 + MGP_LPJ_P0044331 Naa50 protein_coding protein_coding MGP_LPJ_T0044598.1 MGP_LPJ_G0022807.1 mouse_genomes_project 16 57642105 57655112 + MGP_LPJ_P0044598 Cpox protein_coding protein_coding MGP_LPJ_T0044111.1 MGP_LPJ_G0022685.1 mouse_genomes_project 16 34413864 34424214 - MGP_LPJ_P0044111 BC100530 protein_coding protein_coding MGP_LPJ_T0044113.1 MGP_LPJ_G0022685.1 mouse_genomes_project 16 34413867 34424014 - MGP_LPJ_P0044113 BC100530 protein_coding nonsense_mediated_decay MGP_LPJ_T0044114.1 MGP_LPJ_G0022685.1 mouse_genomes_project 16 34420507 34424017 - BC100530 protein_coding retained_intron MGP_LPJ_T0099199.1 MGP_LPJ_G0037462.1 mouse_genomes_project 16 84523150 84523257 + Gm24508 snRNA snRNA MGP_LPJ_T0044391.1 MGP_LPJ_G0022749.1 mouse_genomes_project 16 43652998 43672347 - MGP_LPJ_P0044391 Slc35a5 protein_coding protein_coding MGP_LPJ_T0044392.1 MGP_LPJ_G0022749.1 mouse_genomes_project 16 43655372 43672207 - MGP_LPJ_P0044392 Slc35a5 protein_coding protein_coding MGP_LPJ_T0044393.1 MGP_LPJ_G0022749.1 mouse_genomes_project 16 43657440 43665348 - Slc35a5 protein_coding retained_intron MGP_LPJ_T0044394.1 MGP_LPJ_G0022749.1 mouse_genomes_project 16 43657583 43672285 - MGP_LPJ_P0044394 Slc35a5 protein_coding protein_coding MGP_LPJ_T0044395.1 MGP_LPJ_G0022749.1 mouse_genomes_project 16 43657603 43671824 - MGP_LPJ_P0044395 Slc35a5 protein_coding protein_coding MGP_LPJ_T0044396.1 MGP_LPJ_G0022749.1 mouse_genomes_project 16 43665988 43672296 - Slc35a5 protein_coding retained_intron MGP_LPJ_T0044397.1 MGP_LPJ_G0022749.1 mouse_genomes_project 16 43666031 43672094 - MGP_LPJ_P0044397 Slc35a5 protein_coding protein_coding MGP_LPJ_T0044398.1 MGP_LPJ_G0022749.1 mouse_genomes_project 16 43668116 43672241 - Slc35a5 protein_coding retained_intron MGP_LPJ_T0013129.1 MGP_LPJ_G0011220.1 mouse_genomes_project 16 13425304 13425724 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006867.1 MGP_LPJ_G0005666.1 mouse_genomes_project 16 42791546 42794623 + Gm26732 lincRNA lincRNA MGP_LPJ_T0043614.1 MGP_LPJ_G0022554.1 mouse_genomes_project 16 17766939 17772941 + MGP_LPJ_P0043614 Fam131a protein_coding protein_coding MGP_LPJ_T0043615.1 MGP_LPJ_G0022554.1 mouse_genomes_project 16 17768565 17776706 + MGP_LPJ_P0043615 Fam131a protein_coding protein_coding MGP_LPJ_T0043616.1 MGP_LPJ_G0022554.1 mouse_genomes_project 16 17768774 17776640 + MGP_LPJ_P0043616 Fam131a protein_coding protein_coding MGP_LPJ_T0043617.1 MGP_LPJ_G0022554.1 mouse_genomes_project 16 17769832 17775317 + MGP_LPJ_P0043617 Fam131a protein_coding protein_coding MGP_LPJ_T0017466.1 MGP_LPJ_G0015243.1 mouse_genomes_project 16 91721781 91733796 + 4931406G06Rik processed_transcript processed_transcript MGP_LPJ_T0043214.1 MGP_LPJ_G0022470.1 mouse_genomes_project 16 14034169 14042335 - MGP_LPJ_P0043214 Ccdc116 protein_coding protein_coding MGP_LPJ_T0043215.1 MGP_LPJ_G0022470.1 mouse_genomes_project 16 14034338 14039188 - MGP_LPJ_P0043215 Ccdc116 protein_coding unknown_likely_coding MGP_LPJ_T0043216.1 MGP_LPJ_G0022470.1 mouse_genomes_project 16 14036141 14039315 - MGP_LPJ_P0043216 Ccdc116 protein_coding protein_coding MGP_LPJ_T0043217.1 MGP_LPJ_G0022470.1 mouse_genomes_project 16 14036142 14039529 - MGP_LPJ_P0043217 Ccdc116 protein_coding protein_coding MGP_LPJ_T0043218.1 MGP_LPJ_G0022470.1 mouse_genomes_project 16 14037826 14039544 - Ccdc116 protein_coding processed_transcript MGP_LPJ_T0042982.1 MGP_LPJ_G0022421.1 mouse_genomes_project 16 7876180 7942565 - MGP_LPJ_P0042982 Txndc11 protein_coding protein_coding MGP_LPJ_T0042983.1 MGP_LPJ_G0022421.1 mouse_genomes_project 16 7876694 7886052 - Txndc11 protein_coding retained_intron MGP_LPJ_T0042984.1 MGP_LPJ_G0022421.1 mouse_genomes_project 16 7886018 7888619 - Txndc11 protein_coding processed_transcript MGP_LPJ_T0042985.1 MGP_LPJ_G0022421.1 mouse_genomes_project 16 7886785 7942526 - MGP_LPJ_P0042985 Txndc11 protein_coding protein_coding MGP_LPJ_T0042986.1 MGP_LPJ_G0022421.1 mouse_genomes_project 16 7888501 7942488 - MGP_LPJ_P0042986 Txndc11 protein_coding nonsense_mediated_decay MGP_LPJ_T0042987.1 MGP_LPJ_G0022421.1 mouse_genomes_project 16 7889538 7926355 - Txndc11 protein_coding processed_transcript MGP_LPJ_T0042988.1 MGP_LPJ_G0022421.1 mouse_genomes_project 16 7905860 7942468 - MGP_LPJ_P0042988 Txndc11 protein_coding nonsense_mediated_decay MGP_LPJ_T0042989.1 MGP_LPJ_G0022421.1 mouse_genomes_project 16 7907206 7942565 - MGP_LPJ_P0042989 Txndc11 protein_coding nonsense_mediated_decay MGP_LPJ_T0042990.1 MGP_LPJ_G0022421.1 mouse_genomes_project 16 7917685 7942528 - MGP_LPJ_P0042990 Txndc11 protein_coding protein_coding MGP_LPJ_T0043455.1 MGP_LPJ_G0022519.1 mouse_genomes_project 16 15789286 15821714 - MGP_LPJ_P0043455 Cdc45 protein_coding protein_coding MGP_LPJ_T0043456.1 MGP_LPJ_G0022519.1 mouse_genomes_project 16 15789292 15821368 - MGP_LPJ_P0043456 Cdc45 protein_coding protein_coding MGP_LPJ_T0043457.1 MGP_LPJ_G0022519.1 mouse_genomes_project 16 15817097 15821729 - MGP_LPJ_P0043457 Cdc45 protein_coding protein_coding MGP_LPJ_T0042897.1 MGP_LPJ_G0022395.1 mouse_genomes_project 16 5144917 5261482 + MGP_LPJ_P0042897 Abat protein_coding protein_coding MGP_LPJ_T0042898.1 MGP_LPJ_G0022395.1 mouse_genomes_project 16 5144969 5240953 + MGP_LPJ_P0042898 Abat protein_coding protein_coding MGP_LPJ_T0042899.1 MGP_LPJ_G0022395.1 mouse_genomes_project 16 5144971 5217712 + Abat protein_coding retained_intron MGP_LPJ_T0042900.1 MGP_LPJ_G0022395.1 mouse_genomes_project 16 5144973 5259484 + MGP_LPJ_P0042900 Abat protein_coding protein_coding MGP_LPJ_T0042901.1 MGP_LPJ_G0022395.1 mouse_genomes_project 16 5209921 5244339 + MGP_LPJ_P0042901 Abat protein_coding protein_coding MGP_LPJ_T0042902.1 MGP_LPJ_G0022395.1 mouse_genomes_project 16 5220406 5240953 + MGP_LPJ_P0042902 Abat protein_coding protein_coding MGP_LPJ_T0042903.1 MGP_LPJ_G0022395.1 mouse_genomes_project 16 5251583 5258491 + Abat protein_coding processed_transcript MGP_LPJ_T0044110.1 MGP_LPJ_G0022684.1 mouse_genomes_project 16 34339790 34347660 + MGP_LPJ_P0044110 Gm5416 protein_coding protein_coding MGP_LPJ_T0010125.1 MGP_LPJ_G0008243.1 mouse_genomes_project 16 10343058 10343137 + Mir193b miRNA miRNA MGP_LPJ_T0043137.1 MGP_LPJ_G0022458.1 mouse_genomes_project 16 13211676 13263397 - MGP_LPJ_P0043137 Dnm1l protein_coding protein_coding MGP_LPJ_T0043138.1 MGP_LPJ_G0022458.1 mouse_genomes_project 16 13211676 13263397 - MGP_LPJ_P0043138 Dnm1l protein_coding protein_coding MGP_LPJ_T0043139.1 MGP_LPJ_G0022458.1 mouse_genomes_project 16 13211676 13263397 - MGP_LPJ_P0043139 Dnm1l protein_coding protein_coding MGP_LPJ_T0006838.1 MGP_LPJ_G0005640.1 mouse_genomes_project 16 7702692 7705494 - Gm21859 lincRNA lincRNA MGP_LPJ_T0003705.1 MGP_LPJ_G0003351.1 mouse_genomes_project 16 92663681 92667879 + Gm15976 antisense antisense MGP_LPJ_T0010172.1 MGP_LPJ_G0008290.1 mouse_genomes_project 16 77516038 77516109 + Mir125b-2 miRNA miRNA MGP_LPJ_T0043730.1 MGP_LPJ_G0022583.1 mouse_genomes_project 16 20585007 20589789 - MGP_LPJ_P0043730 BC106179 protein_coding protein_coding MGP_LPJ_T0042912.1 MGP_LPJ_G0022399.1 mouse_genomes_project 16 5324679 5327815 + MGP_LPJ_P0042912 Gm43786 protein_coding protein_coding MGP_LPJ_T0042913.1 MGP_LPJ_G0022399.1 mouse_genomes_project 16 5326739 5327821 + Gm43786 protein_coding processed_transcript MGP_LPJ_T0044487.1 MGP_LPJ_G0022777.1 mouse_genomes_project 16 48876255 49135353 - MGP_LPJ_P0044487 Bbx protein_coding protein_coding MGP_LPJ_T0044488.1 MGP_LPJ_G0022777.1 mouse_genomes_project 16 48880193 49135303 - MGP_LPJ_P0044488 Bbx protein_coding protein_coding MGP_LPJ_T0044489.1 MGP_LPJ_G0022777.1 mouse_genomes_project 16 48881030 49135352 - MGP_LPJ_P0044489 Bbx protein_coding protein_coding MGP_LPJ_T0044490.1 MGP_LPJ_G0022777.1 mouse_genomes_project 16 48881555 49031943 - MGP_LPJ_P0044490 Bbx protein_coding protein_coding MGP_LPJ_T0044491.1 MGP_LPJ_G0022777.1 mouse_genomes_project 16 48894877 49135337 - MGP_LPJ_P0044491 Bbx protein_coding protein_coding MGP_LPJ_T0044492.1 MGP_LPJ_G0022777.1 mouse_genomes_project 16 48902895 49135352 - MGP_LPJ_P0044492 Bbx protein_coding protein_coding MGP_LPJ_T0044493.1 MGP_LPJ_G0022777.1 mouse_genomes_project 16 48909183 49132237 - Bbx protein_coding processed_transcript MGP_LPJ_T0044494.1 MGP_LPJ_G0022777.1 mouse_genomes_project 16 49128283 49135272 - Bbx protein_coding retained_intron MGP_LPJ_T0044495.1 MGP_LPJ_G0022777.1 mouse_genomes_project 16 49129705 49135310 - Bbx protein_coding processed_transcript MGP_LPJ_T0013145.1 MGP_LPJ_G0011236.1 mouse_genomes_project 16 20540958 20541412 + processed_pseudogene processed_pseudogene MGP_LPJ_T0044804.1 MGP_LPJ_G0022885.1 mouse_genomes_project 16 88121769 88159037 + MGP_LPJ_P0044804 Bach1 protein_coding protein_coding MGP_LPJ_T0044805.1 MGP_LPJ_G0022885.1 mouse_genomes_project 16 88121828 88147313 + Bach1 protein_coding retained_intron MGP_LPJ_T0000045.1 MGP_LPJ_G0000037.1 mouse_genomes_project 16 16221720 16221762 - MGP_LPJ_P0000045 Iglj4 IG_J_gene IG_J_gene MGP_LPJ_T0043677.1 MGP_LPJ_G0022572.1 mouse_genomes_project 16 19728065 19925871 - MGP_LPJ_P0043677 Dgkg protein_coding protein_coding MGP_LPJ_T0043678.1 MGP_LPJ_G0022572.1 mouse_genomes_project 16 19728826 19925919 - MGP_LPJ_P0043678 Dgkg protein_coding protein_coding MGP_LPJ_T0043679.1 MGP_LPJ_G0022572.1 mouse_genomes_project 16 19809959 19925886 - MGP_LPJ_P0043679 Dgkg protein_coding nonsense_mediated_decay MGP_LPJ_T0043680.1 MGP_LPJ_G0022572.1 mouse_genomes_project 16 19857954 19925726 - Dgkg protein_coding processed_transcript MGP_LPJ_T0043035.1 MGP_LPJ_G0022430.1 mouse_genomes_project 16 9983739 10027449 + MGP_LPJ_P0043035 Ercc4 protein_coding protein_coding MGP_LPJ_T0043036.1 MGP_LPJ_G0022430.1 mouse_genomes_project 16 9983972 10006439 + Ercc4 protein_coding retained_intron MGP_LPJ_T0043037.1 MGP_LPJ_G0022430.1 mouse_genomes_project 16 9983990 10010220 + MGP_LPJ_P0043037 Ercc4 protein_coding nonsense_mediated_decay MGP_LPJ_T0043038.1 MGP_LPJ_G0022430.1 mouse_genomes_project 16 9986571 10029332 + MGP_LPJ_P0043038 Ercc4 protein_coding nonsense_mediated_decay MGP_LPJ_T0043039.1 MGP_LPJ_G0022430.1 mouse_genomes_project 16 10014978 10022716 + Ercc4 protein_coding processed_transcript MGP_LPJ_T0043506.1 MGP_LPJ_G0022538.1 mouse_genomes_project 16 17144186 17176073 + MGP_LPJ_P0043506 Klhl24 protein_coding protein_coding MGP_LPJ_T0043507.1 MGP_LPJ_G0022538.1 mouse_genomes_project 16 17144813 17171390 + MGP_LPJ_P0043507 Klhl24 protein_coding unknown_likely_coding MGP_LPJ_T0043468.1 MGP_LPJ_G0022521.1 mouse_genomes_project 16 15848988 15859017 + MGP_LPJ_P0043468 2510002D24Rik protein_coding protein_coding MGP_LPJ_T0043469.1 MGP_LPJ_G0022521.1 mouse_genomes_project 16 15848991 15849798 + MGP_LPJ_P0043469 2510002D24Rik protein_coding protein_coding MGP_LPJ_T0043470.1 MGP_LPJ_G0022521.1 mouse_genomes_project 16 15848991 15858902 + MGP_LPJ_P0043470 2510002D24Rik protein_coding protein_coding MGP_LPJ_T0043472.1 MGP_LPJ_G0022521.1 mouse_genomes_project 16 15849065 15858657 + 2510002D24Rik protein_coding retained_intron MGP_LPJ_T0043668.1 MGP_LPJ_G0022570.1 mouse_genomes_project 16 19476623 19483125 - Tra2b protein_coding retained_intron MGP_LPJ_T0043669.1 MGP_LPJ_G0022570.1 mouse_genomes_project 16 19476900 19498106 - MGP_LPJ_P0043669 Tra2b protein_coding protein_coding MGP_LPJ_T0043670.1 MGP_LPJ_G0022570.1 mouse_genomes_project 16 19485003 19490113 - Tra2b protein_coding processed_transcript MGP_LPJ_T0043671.1 MGP_LPJ_G0022570.1 mouse_genomes_project 16 19488554 19498248 - Tra2b protein_coding retained_intron MGP_LPJ_T0044563.1 MGP_LPJ_G0022796.1 mouse_genomes_project 16 56085026 56117800 + MGP_LPJ_P0044563 Tomm70a protein_coding protein_coding MGP_LPJ_T0044028.1 MGP_LPJ_G0022660.1 mouse_genomes_project 16 31750366 31778097 + MGP_LPJ_P0044028 Muc13 protein_coding protein_coding MGP_LPJ_T0044029.1 MGP_LPJ_G0022660.1 mouse_genomes_project 16 31750696 31778104 + MGP_LPJ_P0044029 Muc13 protein_coding protein_coding MGP_LPJ_T0013144.1 MGP_LPJ_G0011235.1 mouse_genomes_project 16 19466953 19467348 + processed_pseudogene processed_pseudogene MGP_LPJ_T0045110.1 MGP_LPJ_G0022976.1 mouse_genomes_project 16 95401762 95431198 - MGP_LPJ_P0045110 Dscr3 protein_coding protein_coding MGP_LPJ_T0045111.1 MGP_LPJ_G0022976.1 mouse_genomes_project 16 95406080 95415444 - Dscr3 protein_coding processed_transcript MGP_LPJ_T0045112.1 MGP_LPJ_G0022976.1 mouse_genomes_project 16 95408160 95430800 - Dscr3 protein_coding retained_intron MGP_LPJ_T0045113.1 MGP_LPJ_G0022976.1 mouse_genomes_project 16 95414716 95430809 - Dscr3 protein_coding retained_intron MGP_LPJ_T0045114.1 MGP_LPJ_G0022976.1 mouse_genomes_project 16 95416410 95430785 - Dscr3 protein_coding retained_intron MGP_LPJ_T0099166.1 MGP_LPJ_G0037429.1 mouse_genomes_project 16 20380211 20380317 + Gm23715 snRNA snRNA MGP_LPJ_T0044497.1 MGP_LPJ_G0022779.1 mouse_genomes_project 16 50771100 50955092 + MGP_LPJ_P0044497 Cblb protein_coding protein_coding MGP_LPJ_T0044498.1 MGP_LPJ_G0022779.1 mouse_genomes_project 16 50772528 50951739 + MGP_LPJ_P0044498 Cblb protein_coding unknown_likely_coding MGP_LPJ_T0013192.1 MGP_LPJ_G0011283.1 mouse_genomes_project 16 95528148 95528359 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100429.1 MGP_LPJ_G0038692.1 mouse_genomes_project 16 33788777 33788925 - Gm25967 snoRNA snoRNA MGP_LPJ_T0043088.1 MGP_LPJ_G0022441.1 mouse_genomes_project 16 10905334 11023282 + MGP_LPJ_P0043088 2900011O08Rik protein_coding protein_coding MGP_LPJ_T0017446.1 MGP_LPJ_G0015240.1 mouse_genomes_project 16 77087845 77221766 + processed_transcript lincRNA MGP_LPJ_T0017447.1 MGP_LPJ_G0015240.1 mouse_genomes_project 16 77087845 77467895 + processed_transcript lincRNA MGP_LPJ_T0017448.1 MGP_LPJ_G0015240.1 mouse_genomes_project 16 77087847 77466426 + processed_transcript lincRNA MGP_LPJ_T0017449.1 MGP_LPJ_G0015240.1 mouse_genomes_project 16 77185803 77555967 + processed_transcript lincRNA MGP_LPJ_T0017450.1 MGP_LPJ_G0015240.1 mouse_genomes_project 16 77185811 77218975 + processed_transcript lincRNA MGP_LPJ_T0017451.1 MGP_LPJ_G0015240.1 mouse_genomes_project 16 77185828 77464396 + processed_transcript lincRNA MGP_LPJ_T0017452.1 MGP_LPJ_G0015240.1 mouse_genomes_project 16 77185882 77467916 + processed_transcript lincRNA MGP_LPJ_T0017453.1 MGP_LPJ_G0015240.1 mouse_genomes_project 16 77185951 77425419 + processed_transcript lincRNA MGP_LPJ_T0017454.1 MGP_LPJ_G0015240.1 mouse_genomes_project 16 77186127 77567186 + processed_transcript lincRNA MGP_LPJ_T0017455.1 MGP_LPJ_G0015240.1 mouse_genomes_project 16 77320251 77322757 + processed_transcript TEC MGP_LPJ_T0017456.1 MGP_LPJ_G0015240.1 mouse_genomes_project 16 77366214 77468011 + processed_transcript lincRNA MGP_LPJ_T0017457.1 MGP_LPJ_G0015240.1 mouse_genomes_project 16 77366374 77567190 + processed_transcript lincRNA MGP_LPJ_T0017458.1 MGP_LPJ_G0015240.1 mouse_genomes_project 16 77463299 77465546 + processed_transcript TEC MGP_LPJ_T0017459.1 MGP_LPJ_G0015240.1 mouse_genomes_project 16 77463837 77464439 + processed_transcript lincRNA MGP_LPJ_T0017460.1 MGP_LPJ_G0015240.1 mouse_genomes_project 16 77540905 77567184 + processed_transcript lincRNA MGP_LPJ_T0017461.1 MGP_LPJ_G0015240.1 mouse_genomes_project 16 77555678 77567184 + processed_transcript lincRNA MGP_LPJ_T0101910.1 MGP_LPJ_G0039947.1 mouse_genomes_project 16 58027036 58028097 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0043856.1 MGP_LPJ_G0022622.1 mouse_genomes_project 16 29192048 29226916 + MGP_LPJ_P0043856 Bdh1 protein_coding protein_coding MGP_LPJ_T0043857.1 MGP_LPJ_G0022622.1 mouse_genomes_project 16 29198488 29228320 + MGP_LPJ_P0043857 Bdh1 protein_coding protein_coding MGP_LPJ_T0043858.1 MGP_LPJ_G0022622.1 mouse_genomes_project 16 29198492 29207637 + Bdh1 protein_coding retained_intron MGP_LPJ_T0043859.1 MGP_LPJ_G0022622.1 mouse_genomes_project 16 29199039 29226641 + MGP_LPJ_P0043859 Bdh1 protein_coding protein_coding MGP_LPJ_T0043860.1 MGP_LPJ_G0022622.1 mouse_genomes_project 16 29205724 29226169 + MGP_LPJ_P0043860 Bdh1 protein_coding protein_coding MGP_LPJ_T0043861.1 MGP_LPJ_G0022622.1 mouse_genomes_project 16 29227534 29228320 + Bdh1 protein_coding processed_transcript MGP_LPJ_T0044695.1 MGP_LPJ_G0022854.1 mouse_genomes_project 16 69936817 70218191 + MGP_LPJ_P0044695 Gbe1 protein_coding protein_coding MGP_LPJ_T0044696.1 MGP_LPJ_G0022854.1 mouse_genomes_project 16 69936931 69998225 + Gbe1 protein_coding retained_intron MGP_LPJ_T0044697.1 MGP_LPJ_G0022854.1 mouse_genomes_project 16 69936932 70184068 + Gbe1 protein_coding retained_intron MGP_LPJ_T0044698.1 MGP_LPJ_G0022854.1 mouse_genomes_project 16 69936932 70183637 + MGP_LPJ_P0044698 Gbe1 protein_coding protein_coding MGP_LPJ_T0044699.1 MGP_LPJ_G0022854.1 mouse_genomes_project 16 69936955 70218191 + MGP_LPJ_P0044699 Gbe1 protein_coding protein_coding MGP_LPJ_T0044700.1 MGP_LPJ_G0022854.1 mouse_genomes_project 16 69937002 70218189 + MGP_LPJ_P0044700 Gbe1 protein_coding protein_coding MGP_LPJ_T0044701.1 MGP_LPJ_G0022854.1 mouse_genomes_project 16 70209722 70217972 + Gbe1 protein_coding retained_intron MGP_LPJ_T0044189.1 MGP_LPJ_G0022701.1 mouse_genomes_project 16 35671497 35703544 - MGP_LPJ_P0044189 Gtf2e1 protein_coding protein_coding MGP_LPJ_T0044190.1 MGP_LPJ_G0022701.1 mouse_genomes_project 16 35696267 35703531 - Gtf2e1 protein_coding retained_intron MGP_LPJ_T0042782.1 MGP_LPJ_G0022364.1 mouse_genomes_project 16 762371 793339 - MGP_LPJ_P0042782 protein_coding unknown_likely_coding MGP_LPJ_T0042783.1 MGP_LPJ_G0022364.1 mouse_genomes_project 16 765020 901600 - MGP_LPJ_P0042783 protein_coding protein_coding MGP_LPJ_T0042784.1 MGP_LPJ_G0022364.1 mouse_genomes_project 16 765020 900910 - MGP_LPJ_P0042784 protein_coding protein_coding MGP_LPJ_T0042785.1 MGP_LPJ_G0022364.1 mouse_genomes_project 16 765036 900689 - MGP_LPJ_P0042785 protein_coding protein_coding MGP_LPJ_T0010122.1 MGP_LPJ_G0008240.1 mouse_genomes_project 16 7019501 7019573 + Gm22932 miRNA miRNA MGP_LPJ_T0043629.1 MGP_LPJ_G0022557.1 mouse_genomes_project 16 17799058 17812022 - MGP_LPJ_P0043629 Thpo protein_coding protein_coding MGP_LPJ_T0043656.1 MGP_LPJ_G0022566.1 mouse_genomes_project 16 19157683 19206062 - MGP_LPJ_P0043656 Liph protein_coding protein_coding MGP_LPJ_T0043657.1 MGP_LPJ_G0022566.1 mouse_genomes_project 16 19157683 19206062 - MGP_LPJ_P0043657 Liph protein_coding protein_coding MGP_LPJ_T0044734.1 MGP_LPJ_G0022864.1 mouse_genomes_project 16 78200636 78241649 + MGP_LPJ_P0044734 Cxadr protein_coding protein_coding MGP_LPJ_T0044735.1 MGP_LPJ_G0022864.1 mouse_genomes_project 16 78200883 78253575 + MGP_LPJ_P0044735 Cxadr protein_coding protein_coding MGP_LPJ_T0101280.1 MGP_LPJ_G0039511.1 mouse_genomes_project 16 12330079 12330855 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0006866.1 MGP_LPJ_G0005665.1 mouse_genomes_project 16 41818927 41828706 - Gm15713 lincRNA lincRNA MGP_LPJ_T0042746.1 MGP_LPJ_G0022359.1 mouse_genomes_project 16 403566 434072 - MGP_LPJ_P0042746 Nlrc3 protein_coding protein_coding MGP_LPJ_T0042747.1 MGP_LPJ_G0022359.1 mouse_genomes_project 16 404169 434159 - MGP_LPJ_P0042747 Nlrc3 protein_coding protein_coding MGP_LPJ_T0042748.1 MGP_LPJ_G0022359.1 mouse_genomes_project 16 407237 434159 - Nlrc3 protein_coding retained_intron MGP_LPJ_T0042749.1 MGP_LPJ_G0022359.1 mouse_genomes_project 16 407246 422463 - Nlrc3 protein_coding retained_intron MGP_LPJ_T0013150.1 MGP_LPJ_G0011241.1 mouse_genomes_project 16 26921119 26921513 - processed_pseudogene processed_pseudogene MGP_LPJ_T0097999.1 MGP_LPJ_G0036280.1 mouse_genomes_project 16 58152440 58153319 - pseudogene pseudogene MGP_LPJ_T0017443.1 MGP_LPJ_G0015237.1 mouse_genomes_project 16 57352574 57355973 - 4930461C15Rik processed_transcript processed_transcript MGP_LPJ_T0044827.1 MGP_LPJ_G0022901.1 mouse_genomes_project 16 89371322 89373427 - MGP_LPJ_P0044827 Krtap19-1 protein_coding protein_coding MGP_LPJ_T0042927.1 MGP_LPJ_G0022401.1 mouse_genomes_project 16 5484442 5515750 + MGP_LPJ_P0042927 1810013L24Rik protein_coding protein_coding MGP_LPJ_T0044574.1 MGP_LPJ_G0022802.1 mouse_genomes_project 16 56579383 56718145 - MGP_LPJ_P0044574 Col8a1 protein_coding protein_coding MGP_LPJ_T0013110.1 MGP_LPJ_G0011201.1 mouse_genomes_project 16 5263093 5263634 - processed_pseudogene processed_pseudogene MGP_LPJ_T0043783.1 MGP_LPJ_G0022605.1 mouse_genomes_project 16 26842649 26863434 + MGP_LPJ_P0043783 Hrasls protein_coding protein_coding MGP_LPJ_T0043784.1 MGP_LPJ_G0022605.1 mouse_genomes_project 16 26843062 26861285 + MGP_LPJ_P0043784 Hrasls protein_coding protein_coding MGP_LPJ_T0043785.1 MGP_LPJ_G0022605.1 mouse_genomes_project 16 26843084 26861131 + Hrasls protein_coding processed_transcript MGP_LPJ_T0043786.1 MGP_LPJ_G0022605.1 mouse_genomes_project 16 26843124 26853240 + MGP_LPJ_P0043786 Hrasls protein_coding nonsense_mediated_decay MGP_LPJ_T0099163.1 MGP_LPJ_G0037426.1 mouse_genomes_project 16 17824546 17824711 + Gm22741 snRNA snRNA MGP_LPJ_T0003711.1 MGP_LPJ_G0003357.1 mouse_genomes_project 16 99104707 99107530 - C030010L15Rik antisense antisense MGP_LPJ_T0003712.1 MGP_LPJ_G0003357.1 mouse_genomes_project 16 99104769 99105250 - C030010L15Rik antisense antisense MGP_LPJ_T0044854.1 MGP_LPJ_G0022926.1 mouse_genomes_project 16 90111561 90112569 - MGP_LPJ_P0044854 Krtap11-1 protein_coding protein_coding MGP_LPJ_T0006865.1 MGP_LPJ_G0005664.1 mouse_genomes_project 16 41752694 41770612 - Gm9968 lincRNA lincRNA MGP_LPJ_T0043153.1 MGP_LPJ_G0022461.1 mouse_genomes_project 16 13642915 13722225 - MGP_LPJ_P0043153 Spag6l protein_coding protein_coding MGP_LPJ_T0043154.1 MGP_LPJ_G0022461.1 mouse_genomes_project 16 13662329 13722232 - Spag6l protein_coding retained_intron MGP_LPJ_T0043155.1 MGP_LPJ_G0022461.1 mouse_genomes_project 16 13684157 13722193 - Spag6l protein_coding processed_transcript MGP_LPJ_T0043156.1 MGP_LPJ_G0022461.1 mouse_genomes_project 16 13684191 13722256 - Spag6l protein_coding processed_transcript MGP_LPJ_T0043157.1 MGP_LPJ_G0022461.1 mouse_genomes_project 16 13714102 13722368 - Spag6l protein_coding processed_transcript MGP_LPJ_T0043158.1 MGP_LPJ_G0022461.1 mouse_genomes_project 16 13714374 13722225 - Spag6l protein_coding processed_transcript MGP_LPJ_T0043159.1 MGP_LPJ_G0022461.1 mouse_genomes_project 16 13717806 13722219 - Spag6l protein_coding processed_transcript MGP_LPJ_T0043882.1 MGP_LPJ_G0022626.1 mouse_genomes_project 16 29740863 29742308 - MGP_LPJ_P0043882 0610012G03Rik protein_coding protein_coding MGP_LPJ_T0011821.1 MGP_LPJ_G0009934.1 mouse_genomes_project 16 98621959 98650533 + MGP_LPJ_P0011821 Mx2 polymorphic_pseudogene polymorphic_pseudogene MGP_LPJ_T0011822.1 MGP_LPJ_G0009934.1 mouse_genomes_project 16 98622729 98651094 + MGP_LPJ_P0011822 Mx2 polymorphic_pseudogene polymorphic_pseudogene MGP_LPJ_T0011823.1 MGP_LPJ_G0009934.1 mouse_genomes_project 16 98622731 98651093 + MGP_LPJ_P0011823 Mx2 polymorphic_pseudogene protein_coding MGP_LPJ_T0011824.1 MGP_LPJ_G0009934.1 mouse_genomes_project 16 98639082 98640666 + Mx2 polymorphic_pseudogene processed_transcript MGP_LPJ_T0011825.1 MGP_LPJ_G0009934.1 mouse_genomes_project 16 98648605 98650712 + Mx2 polymorphic_pseudogene retained_intron MGP_LPJ_T0043355.1 MGP_LPJ_G0022497.1 mouse_genomes_project 16 14884071 14886024 - MGP_LPJ_P0043355 Gsc2 protein_coding protein_coding MGP_LPJ_T0044870.1 MGP_LPJ_G0022928.1 mouse_genomes_project 16 90831077 90836658 + MGP_LPJ_P0044870 Sod1 protein_coding protein_coding MGP_LPJ_T0042846.1 MGP_LPJ_G0022379.1 mouse_genomes_project 16 1450895 1474952 - MGP_LPJ_P0042846 Anks3 protein_coding protein_coding MGP_LPJ_T0043293.1 MGP_LPJ_G0022485.1 mouse_genomes_project 16 14492143 14495859 - Slc7a4 protein_coding retained_intron MGP_LPJ_T0043294.1 MGP_LPJ_G0022485.1 mouse_genomes_project 16 14492464 14495852 - MGP_LPJ_P0043294 Slc7a4 protein_coding protein_coding MGP_LPJ_T0043295.1 MGP_LPJ_G0022485.1 mouse_genomes_project 16 14494590 14495819 - MGP_LPJ_P0043295 Slc7a4 protein_coding protein_coding MGP_LPJ_T0043296.1 MGP_LPJ_G0022485.1 mouse_genomes_project 16 14494700 14495408 - MGP_LPJ_P0043296 Slc7a4 protein_coding protein_coding MGP_LPJ_T0043297.1 MGP_LPJ_G0022485.1 mouse_genomes_project 16 14494876 14495859 - MGP_LPJ_P0043297 Slc7a4 protein_coding protein_coding MGP_LPJ_T0044908.1 MGP_LPJ_G0022937.1 mouse_genomes_project 16 91689371 91721669 - MGP_LPJ_P0044908 Paxbp1 protein_coding protein_coding MGP_LPJ_T0044909.1 MGP_LPJ_G0022937.1 mouse_genomes_project 16 91690244 91721290 - MGP_LPJ_P0044909 Paxbp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0044910.1 MGP_LPJ_G0022937.1 mouse_genomes_project 16 91692177 91694553 - Paxbp1 protein_coding processed_transcript MGP_LPJ_T0044911.1 MGP_LPJ_G0022937.1 mouse_genomes_project 16 91700132 91706303 - Paxbp1 protein_coding retained_intron MGP_LPJ_T0044912.1 MGP_LPJ_G0022937.1 mouse_genomes_project 16 91700877 91705990 - MGP_LPJ_P0044912 Paxbp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0044913.1 MGP_LPJ_G0022937.1 mouse_genomes_project 16 91700996 91702957 - Paxbp1 protein_coding retained_intron MGP_LPJ_T0044914.1 MGP_LPJ_G0022937.1 mouse_genomes_project 16 91705924 91710380 - Paxbp1 protein_coding retained_intron MGP_LPJ_T0044915.1 MGP_LPJ_G0022937.1 mouse_genomes_project 16 91707050 91721480 - Paxbp1 protein_coding processed_transcript MGP_LPJ_T0044281.1 MGP_LPJ_G0022728.1 mouse_genomes_project 16 41269643 41872211 + Zbtb20 protein_coding retained_intron MGP_LPJ_T0044282.1 MGP_LPJ_G0022728.1 mouse_genomes_project 16 41302202 41471719 + Zbtb20 protein_coding processed_transcript MGP_LPJ_T0044283.1 MGP_LPJ_G0022728.1 mouse_genomes_project 16 41302352 41984979 + Zbtb20 protein_coding processed_transcript MGP_LPJ_T0044284.1 MGP_LPJ_G0022728.1 mouse_genomes_project 16 41302455 41992875 + MGP_LPJ_P0044284 Zbtb20 protein_coding protein_coding MGP_LPJ_T0044285.1 MGP_LPJ_G0022728.1 mouse_genomes_project 16 41302462 41872110 + Zbtb20 protein_coding retained_intron MGP_LPJ_T0044286.1 MGP_LPJ_G0022728.1 mouse_genomes_project 16 41635994 42025054 + MGP_LPJ_P0044286 Zbtb20 protein_coding protein_coding MGP_LPJ_T0044287.1 MGP_LPJ_G0022728.1 mouse_genomes_project 16 41636153 41707686 + Zbtb20 protein_coding retained_intron MGP_LPJ_T0044288.1 MGP_LPJ_G0022728.1 mouse_genomes_project 16 41769993 41984959 + Zbtb20 protein_coding processed_transcript MGP_LPJ_T0044289.1 MGP_LPJ_G0022728.1 mouse_genomes_project 16 41770409 41993901 + Zbtb20 protein_coding retained_intron MGP_LPJ_T0044290.1 MGP_LPJ_G0022728.1 mouse_genomes_project 16 41770871 42025001 + MGP_LPJ_P0044290 Zbtb20 protein_coding protein_coding MGP_LPJ_T0044291.1 MGP_LPJ_G0022728.1 mouse_genomes_project 16 41771202 42025008 + MGP_LPJ_P0044291 Zbtb20 protein_coding protein_coding MGP_LPJ_T0044292.1 MGP_LPJ_G0022728.1 mouse_genomes_project 16 41916734 41992343 + MGP_LPJ_P0044292 Zbtb20 protein_coding protein_coding MGP_LPJ_T0044293.1 MGP_LPJ_G0022728.1 mouse_genomes_project 16 41916742 41986973 + MGP_LPJ_P0044293 Zbtb20 protein_coding protein_coding MGP_LPJ_T0044294.1 MGP_LPJ_G0022728.1 mouse_genomes_project 16 41916762 42025243 + MGP_LPJ_P0044294 Zbtb20 protein_coding protein_coding MGP_LPJ_T0044295.1 MGP_LPJ_G0022728.1 mouse_genomes_project 16 41916817 41992324 + Zbtb20 protein_coding processed_transcript MGP_LPJ_T0044296.1 MGP_LPJ_G0022728.1 mouse_genomes_project 16 41921301 41984979 + Zbtb20 protein_coding processed_transcript MGP_LPJ_T0044297.1 MGP_LPJ_G0022728.1 mouse_genomes_project 16 41992332 42034229 + MGP_LPJ_P0044297 Zbtb20 protein_coding protein_coding MGP_LPJ_T0099190.1 MGP_LPJ_G0037453.1 mouse_genomes_project 16 53839294 53839401 + Gm22977 snRNA snRNA MGP_LPJ_T0100447.1 MGP_LPJ_G0038710.1 mouse_genomes_project 16 71294593 71294724 + Gm22797 snoRNA snoRNA MGP_LPJ_T0000991.1 MGP_LPJ_G0000918.1 mouse_genomes_project 16 57287564 57289855 - TEC TEC MGP_LPJ_T0044951.1 MGP_LPJ_G0022950.1 mouse_genomes_project 16 92375383 92407113 + MGP_LPJ_P0044951 Son protein_coding protein_coding MGP_LPJ_T0044952.1 MGP_LPJ_G0022950.1 mouse_genomes_project 16 92375756 92407101 + MGP_LPJ_P0044952 Son protein_coding protein_coding MGP_LPJ_T0044953.1 MGP_LPJ_G0022950.1 mouse_genomes_project 16 92375756 92393560 + MGP_LPJ_P0044953 Son protein_coding protein_coding MGP_LPJ_T0044954.1 MGP_LPJ_G0022950.1 mouse_genomes_project 16 92375756 92407101 + MGP_LPJ_P0044954 Son protein_coding nonsense_mediated_decay MGP_LPJ_T0044955.1 MGP_LPJ_G0022950.1 mouse_genomes_project 16 92375757 92391885 + MGP_LPJ_P0044955 Son protein_coding protein_coding MGP_LPJ_T0044956.1 MGP_LPJ_G0022950.1 mouse_genomes_project 16 92375762 92407127 + MGP_LPJ_P0044956 Son protein_coding protein_coding MGP_LPJ_T0044957.1 MGP_LPJ_G0022950.1 mouse_genomes_project 16 92387794 92407098 + MGP_LPJ_P0044957 Son protein_coding nonsense_mediated_decay MGP_LPJ_T0044958.1 MGP_LPJ_G0022950.1 mouse_genomes_project 16 92392071 92400043 + Son protein_coding processed_transcript MGP_LPJ_T0044959.1 MGP_LPJ_G0022950.1 mouse_genomes_project 16 92399250 92400612 + Son protein_coding processed_transcript MGP_LPJ_T0044960.1 MGP_LPJ_G0022950.1 mouse_genomes_project 16 92401342 92405517 + Son protein_coding processed_transcript MGP_LPJ_T0044961.1 MGP_LPJ_G0022950.1 mouse_genomes_project 16 92401572 92406026 + Son protein_coding processed_transcript MGP_LPJ_T0044962.1 MGP_LPJ_G0022950.1 mouse_genomes_project 16 92402008 92406407 + Son protein_coding processed_transcript MGP_LPJ_T0044963.1 MGP_LPJ_G0022950.1 mouse_genomes_project 16 92402833 92405339 + Son protein_coding retained_intron MGP_LPJ_T0013169.1 MGP_LPJ_G0011260.1 mouse_genomes_project 16 44054151 44055507 - processed_pseudogene processed_pseudogene MGP_LPJ_T0044542.1 MGP_LPJ_G0022790.1 mouse_genomes_project 16 55119778 55194699 + MGP_LPJ_P0044542 protein_coding protein_coding MGP_LPJ_T0044543.1 MGP_LPJ_G0022790.1 mouse_genomes_project 16 55119797 55128658 + protein_coding processed_transcript MGP_LPJ_T0044544.1 MGP_LPJ_G0022790.1 mouse_genomes_project 16 55119803 55197295 + MGP_LPJ_P0044544 protein_coding protein_coding MGP_LPJ_T0044545.1 MGP_LPJ_G0022790.1 mouse_genomes_project 16 55193722 55194579 + protein_coding processed_transcript MGP_LPJ_T0043230.1 MGP_LPJ_G0022473.1 mouse_genomes_project 16 14105694 14111481 + MGP_LPJ_P0043230 Rimbp3 protein_coding protein_coding MGP_LPJ_T0013156.1 MGP_LPJ_G0011247.1 mouse_genomes_project 16 34003242 34003515 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006857.1 MGP_LPJ_G0005656.1 mouse_genomes_project 16 27575865 27620679 - Gm26569 lincRNA lincRNA MGP_LPJ_T0101913.1 MGP_LPJ_G0039950.1 mouse_genomes_project 16 58087908 58088712 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0043410.1 MGP_LPJ_G0022510.1 mouse_genomes_project 16 15341856 15400871 + MGP_LPJ_P0043410 Arvcf protein_coding protein_coding MGP_LPJ_T0043411.1 MGP_LPJ_G0022510.1 mouse_genomes_project 16 15341948 15400867 + MGP_LPJ_P0043411 Arvcf protein_coding protein_coding MGP_LPJ_T0043412.1 MGP_LPJ_G0022510.1 mouse_genomes_project 16 15341948 15400871 + MGP_LPJ_P0043412 Arvcf protein_coding protein_coding MGP_LPJ_T0043413.1 MGP_LPJ_G0022510.1 mouse_genomes_project 16 15374093 15400542 + MGP_LPJ_P0043413 Arvcf protein_coding protein_coding MGP_LPJ_T0043414.1 MGP_LPJ_G0022510.1 mouse_genomes_project 16 15385546 15400871 + MGP_LPJ_P0043414 Arvcf protein_coding nonsense_mediated_decay MGP_LPJ_T0043415.1 MGP_LPJ_G0022510.1 mouse_genomes_project 16 15385547 15400051 + MGP_LPJ_P0043415 Arvcf protein_coding protein_coding MGP_LPJ_T0043416.1 MGP_LPJ_G0022510.1 mouse_genomes_project 16 15390635 15392801 + Arvcf protein_coding processed_transcript MGP_LPJ_T0043417.1 MGP_LPJ_G0022510.1 mouse_genomes_project 16 15392884 15394435 + Arvcf protein_coding retained_intron MGP_LPJ_T0043418.1 MGP_LPJ_G0022510.1 mouse_genomes_project 16 15394926 15397226 + Arvcf protein_coding processed_transcript MGP_LPJ_T0043419.1 MGP_LPJ_G0022510.1 mouse_genomes_project 16 15397243 15398253 + Arvcf protein_coding retained_intron MGP_LPJ_T0013152.1 MGP_LPJ_G0011243.1 mouse_genomes_project 16 29764662 29765107 - processed_pseudogene processed_pseudogene MGP_LPJ_T0043163.1 MGP_LPJ_G0022463.1 mouse_genomes_project 16 13752548 13768529 + MGP_LPJ_P0043163 Top3b protein_coding protein_coding MGP_LPJ_T0043164.1 MGP_LPJ_G0022463.1 mouse_genomes_project 16 13752569 13775665 + MGP_LPJ_P0043164 Top3b protein_coding protein_coding MGP_LPJ_T0043165.1 MGP_LPJ_G0022463.1 mouse_genomes_project 16 13752579 13762012 + MGP_LPJ_P0043165 Top3b protein_coding protein_coding MGP_LPJ_T0043166.1 MGP_LPJ_G0022463.1 mouse_genomes_project 16 13752586 13766213 + MGP_LPJ_P0043166 Top3b protein_coding protein_coding MGP_LPJ_T0043167.1 MGP_LPJ_G0022463.1 mouse_genomes_project 16 13752593 13775670 + MGP_LPJ_P0043167 Top3b protein_coding protein_coding MGP_LPJ_T0043168.1 MGP_LPJ_G0022463.1 mouse_genomes_project 16 13752598 13768146 + Top3b protein_coding retained_intron MGP_LPJ_T0043169.1 MGP_LPJ_G0022463.1 mouse_genomes_project 16 13752599 13763336 + MGP_LPJ_P0043169 Top3b protein_coding protein_coding MGP_LPJ_T0043170.1 MGP_LPJ_G0022463.1 mouse_genomes_project 16 13752612 13762027 + Top3b protein_coding retained_intron MGP_LPJ_T0043171.1 MGP_LPJ_G0022463.1 mouse_genomes_project 16 13752619 13761739 + MGP_LPJ_P0043171 Top3b protein_coding protein_coding MGP_LPJ_T0043172.1 MGP_LPJ_G0022463.1 mouse_genomes_project 16 13752629 13775670 + Top3b protein_coding retained_intron MGP_LPJ_T0043173.1 MGP_LPJ_G0022463.1 mouse_genomes_project 16 13752652 13761674 + MGP_LPJ_P0043173 Top3b protein_coding protein_coding MGP_LPJ_T0043174.1 MGP_LPJ_G0022463.1 mouse_genomes_project 16 13752777 13762154 + Top3b protein_coding retained_intron MGP_LPJ_T0043175.1 MGP_LPJ_G0022463.1 mouse_genomes_project 16 13766128 13775653 + MGP_LPJ_P0043175 Top3b protein_coding protein_coding MGP_LPJ_T0043176.1 MGP_LPJ_G0022463.1 mouse_genomes_project 16 13766898 13775670 + Top3b protein_coding retained_intron MGP_LPJ_T0043177.1 MGP_LPJ_G0022463.1 mouse_genomes_project 16 13768205 13769386 + Top3b protein_coding retained_intron MGP_LPJ_T0043178.1 MGP_LPJ_G0022463.1 mouse_genomes_project 16 13769323 13770390 + Top3b protein_coding retained_intron MGP_LPJ_T0043179.1 MGP_LPJ_G0022463.1 mouse_genomes_project 16 13769589 13770567 + Top3b protein_coding retained_intron MGP_LPJ_T0043180.1 MGP_LPJ_G0022463.1 mouse_genomes_project 16 13770518 13775655 + Top3b protein_coding retained_intron MGP_LPJ_T0043181.1 MGP_LPJ_G0022463.1 mouse_genomes_project 16 13772905 13775180 + MGP_LPJ_P0043181 Top3b protein_coding protein_coding MGP_LPJ_T0043182.1 MGP_LPJ_G0022463.1 mouse_genomes_project 16 13774181 13775099 + Top3b protein_coding retained_intron MGP_LPJ_T0099195.1 MGP_LPJ_G0037458.1 mouse_genomes_project 16 65629133 65629240 + Gm22448 snRNA snRNA MGP_LPJ_T0044374.1 MGP_LPJ_G0022746.1 mouse_genomes_project 16 43373253 43414982 + MGP_LPJ_P0044374 Cd200r2 protein_coding protein_coding MGP_LPJ_T0100416.1 MGP_LPJ_G0038679.1 mouse_genomes_project 16 16448009 16448141 + Gm25762 snoRNA snoRNA MGP_LPJ_T0043728.1 MGP_LPJ_G0022582.1 mouse_genomes_project 16 20504600 20515676 + MGP_LPJ_P0043728 Adipoq protein_coding protein_coding MGP_LPJ_T0043729.1 MGP_LPJ_G0022582.1 mouse_genomes_project 16 20504710 20514940 + MGP_LPJ_P0043729 Adipoq protein_coding protein_coding MGP_LPJ_T0044694.1 MGP_LPJ_G0022853.1 mouse_genomes_project 16 69475193 69482800 - MGP_LPJ_P0044694 Speer2 protein_coding protein_coding MGP_LPJ_T0043934.1 MGP_LPJ_G0022643.1 mouse_genomes_project 16 30339519 30350865 + MGP_LPJ_P0043934 Zdhhc19 protein_coding protein_coding MGP_LPJ_T0043935.1 MGP_LPJ_G0022643.1 mouse_genomes_project 16 30343077 30410227 + Zdhhc19 protein_coding processed_transcript MGP_LPJ_T0043698.1 MGP_LPJ_G0022580.1 mouse_genomes_project 16 20460153 20469388 + MGP_LPJ_P0043698 Eif4a2 protein_coding protein_coding MGP_LPJ_T0043699.1 MGP_LPJ_G0022580.1 mouse_genomes_project 16 20460463 20469577 + MGP_LPJ_P0043699 Eif4a2 protein_coding nonsense_mediated_decay MGP_LPJ_T0043700.1 MGP_LPJ_G0022580.1 mouse_genomes_project 16 20460467 20462010 + Eif4a2 protein_coding retained_intron MGP_LPJ_T0043701.1 MGP_LPJ_G0022580.1 mouse_genomes_project 16 20460467 20466689 + MGP_LPJ_P0043701 Eif4a2 protein_coding protein_coding MGP_LPJ_T0043702.1 MGP_LPJ_G0022580.1 mouse_genomes_project 16 20460468 20461803 + Eif4a2 protein_coding retained_intron MGP_LPJ_T0043703.1 MGP_LPJ_G0022580.1 mouse_genomes_project 16 20460468 20461914 + Eif4a2 protein_coding retained_intron MGP_LPJ_T0043704.1 MGP_LPJ_G0022580.1 mouse_genomes_project 16 20460468 20469387 + MGP_LPJ_P0043704 Eif4a2 protein_coding protein_coding MGP_LPJ_T0043705.1 MGP_LPJ_G0022580.1 mouse_genomes_project 16 20460468 20469367 + MGP_LPJ_P0043705 Eif4a2 protein_coding protein_coding MGP_LPJ_T0043706.1 MGP_LPJ_G0022580.1 mouse_genomes_project 16 20460476 20464664 + Eif4a2 protein_coding retained_intron MGP_LPJ_T0043707.1 MGP_LPJ_G0022580.1 mouse_genomes_project 16 20460480 20463419 + Eif4a2 protein_coding retained_intron MGP_LPJ_T0043708.1 MGP_LPJ_G0022580.1 mouse_genomes_project 16 20460482 20463028 + Eif4a2 protein_coding retained_intron MGP_LPJ_T0043709.1 MGP_LPJ_G0022580.1 mouse_genomes_project 16 20460486 20461883 + Eif4a2 protein_coding retained_intron MGP_LPJ_T0043710.1 MGP_LPJ_G0022580.1 mouse_genomes_project 16 20460486 20469371 + MGP_LPJ_P0043710 Eif4a2 protein_coding nonsense_mediated_decay MGP_LPJ_T0043711.1 MGP_LPJ_G0022580.1 mouse_genomes_project 16 20460487 20469388 + MGP_LPJ_P0043711 Eif4a2 protein_coding nonsense_mediated_decay MGP_LPJ_T0043712.1 MGP_LPJ_G0022580.1 mouse_genomes_project 16 20460488 20462957 + Eif4a2 protein_coding retained_intron MGP_LPJ_T0043713.1 MGP_LPJ_G0022580.1 mouse_genomes_project 16 20460501 20466816 + MGP_LPJ_P0043713 Eif4a2 protein_coding unknown_likely_coding MGP_LPJ_T0043714.1 MGP_LPJ_G0022580.1 mouse_genomes_project 16 20460501 20468752 + MGP_LPJ_P0043714 Eif4a2 protein_coding protein_coding MGP_LPJ_T0043715.1 MGP_LPJ_G0022580.1 mouse_genomes_project 16 20460626 20463360 + Eif4a2 protein_coding processed_transcript MGP_LPJ_T0043716.1 MGP_LPJ_G0022580.1 mouse_genomes_project 16 20461291 20462180 + Eif4a2 protein_coding retained_intron MGP_LPJ_T0043717.1 MGP_LPJ_G0022580.1 mouse_genomes_project 16 20461940 20463276 + Eif4a2 protein_coding retained_intron MGP_LPJ_T0043718.1 MGP_LPJ_G0022580.1 mouse_genomes_project 16 20462685 20465914 + Eif4a2 protein_coding retained_intron MGP_LPJ_T0043719.1 MGP_LPJ_G0022580.1 mouse_genomes_project 16 20462754 20463507 + Eif4a2 protein_coding retained_intron MGP_LPJ_T0043720.1 MGP_LPJ_G0022580.1 mouse_genomes_project 16 20462942 20465131 + Eif4a2 protein_coding retained_intron MGP_LPJ_T0043721.1 MGP_LPJ_G0022580.1 mouse_genomes_project 16 20463381 20465445 + Eif4a2 protein_coding retained_intron MGP_LPJ_T0043722.1 MGP_LPJ_G0022580.1 mouse_genomes_project 16 20463408 20465838 + Eif4a2 protein_coding retained_intron MGP_LPJ_T0010146.1 MGP_LPJ_G0008264.1 mouse_genomes_project 16 26199162 26199271 - Mir690 miRNA miRNA MGP_LPJ_T0044944.1 MGP_LPJ_G0022948.1 mouse_genomes_project 16 92342652 92347344 - MGP_LPJ_P0044944 Dnajc28 protein_coding protein_coding MGP_LPJ_T0044945.1 MGP_LPJ_G0022948.1 mouse_genomes_project 16 92344070 92347339 - MGP_LPJ_P0044945 Dnajc28 protein_coding protein_coding MGP_LPJ_T0044946.1 MGP_LPJ_G0022948.1 mouse_genomes_project 16 92345181 92347336 - MGP_LPJ_P0044946 Dnajc28 protein_coding protein_coding MGP_LPJ_T0044947.1 MGP_LPJ_G0022948.1 mouse_genomes_project 16 92345446 92347371 - MGP_LPJ_P0044947 Dnajc28 protein_coding protein_coding MGP_LPJ_T0017438.1 MGP_LPJ_G0015235.1 mouse_genomes_project 16 41118753 41269350 - 4932412D23Rik processed_transcript processed_transcript MGP_LPJ_T0017439.1 MGP_LPJ_G0015235.1 mouse_genomes_project 16 41191937 41269525 - 4932412D23Rik processed_transcript processed_transcript MGP_LPJ_T0017440.1 MGP_LPJ_G0015235.1 mouse_genomes_project 16 41192298 41269503 - 4932412D23Rik processed_transcript processed_transcript MGP_LPJ_T0017441.1 MGP_LPJ_G0015235.1 mouse_genomes_project 16 41192450 41269509 - 4932412D23Rik processed_transcript processed_transcript MGP_LPJ_T0044852.1 MGP_LPJ_G0022924.1 mouse_genomes_project 16 90020398 90020990 - MGP_LPJ_P0044852 Krtap8-1 protein_coding protein_coding MGP_LPJ_T0044191.1 MGP_LPJ_G0022702.1 mouse_genomes_project 16 35703639 35736373 + MGP_LPJ_P0044191 Rabl3 protein_coding protein_coding MGP_LPJ_T0044192.1 MGP_LPJ_G0022702.1 mouse_genomes_project 16 35703654 35736370 + MGP_LPJ_P0044192 Rabl3 protein_coding nonsense_mediated_decay MGP_LPJ_T0044193.1 MGP_LPJ_G0022702.1 mouse_genomes_project 16 35703659 35728072 + Rabl3 protein_coding retained_intron MGP_LPJ_T0044194.1 MGP_LPJ_G0022702.1 mouse_genomes_project 16 35727757 35731960 + Rabl3 protein_coding retained_intron MGP_LPJ_T0043743.1 MGP_LPJ_G0022590.1 mouse_genomes_project 16 21372958 21398450 - MGP_LPJ_P0043743 Bcl6 protein_coding protein_coding MGP_LPJ_T0043744.1 MGP_LPJ_G0022590.1 mouse_genomes_project 16 21376316 21381003 - Bcl6 protein_coding retained_intron MGP_LPJ_T0006886.1 MGP_LPJ_G0005678.1 mouse_genomes_project 16 84962309 84974371 + Mir155hg lincRNA lincRNA MGP_LPJ_T0006887.1 MGP_LPJ_G0005678.1 mouse_genomes_project 16 84972148 84974371 + Mir155hg lincRNA lincRNA MGP_LPJ_T0013131.1 MGP_LPJ_G0011222.1 mouse_genomes_project 16 13973972 13974665 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006899.1 MGP_LPJ_G0005686.1 mouse_genomes_project 16 96802464 96867519 - 1600002D24Rik lincRNA lincRNA MGP_LPJ_T0006900.1 MGP_LPJ_G0005686.1 mouse_genomes_project 16 96813227 96893384 - 1600002D24Rik lincRNA lincRNA MGP_LPJ_T0044223.1 MGP_LPJ_G0022713.1 mouse_genomes_project 16 36554156 36569389 + MGP_LPJ_P0044223 protein_coding protein_coding MGP_LPJ_T0043017.1 MGP_LPJ_G0022425.1 mouse_genomes_project 16 8129501 8135693 + MGP_LPJ_P0043017 Tnfrsf17 protein_coding protein_coding MGP_LPJ_T0044674.1 MGP_LPJ_G0022844.1 mouse_genomes_project 16 64068544 64079638 - MGP_LPJ_P0044674 4930453N24Rik protein_coding protein_coding MGP_LPJ_T0043119.1 MGP_LPJ_G0022450.1 mouse_genomes_project 16 11847752 11866061 + MGP_LPJ_P0043119 Efcab1 protein_coding protein_coding MGP_LPJ_T0043057.1 MGP_LPJ_G0022436.1 mouse_genomes_project 16 10688066 10722411 + MGP_LPJ_P0043057 Rrn3 protein_coding protein_coding MGP_LPJ_T0044640.1 MGP_LPJ_G0022833.1 mouse_genomes_project 16 58485303 58547831 + MGP_LPJ_P0044640 Gabrr3 protein_coding protein_coding MGP_LPJ_T0003671.1 MGP_LPJ_G0003326.1 mouse_genomes_project 16 19770244 19778331 + 9230117E06Rik antisense antisense MGP_LPJ_T0099168.1 MGP_LPJ_G0037431.1 mouse_genomes_project 16 21836723 21836786 - Gm24440 snRNA snRNA MGP_LPJ_T0099181.1 MGP_LPJ_G0037444.1 mouse_genomes_project 16 34541631 34541734 + Gm25903 snRNA snRNA MGP_LPJ_T0013119.1 MGP_LPJ_G0011210.1 mouse_genomes_project 16 8313602 8315088 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011433.1 MGP_LPJ_G0009551.1 mouse_genomes_project 16 84870604 84870926 - Gm25292 misc_RNA misc_RNA MGP_LPJ_T0043683.1 MGP_LPJ_G0022575.1 mouse_genomes_project 16 20137958 20152502 + MGP_LPJ_P0043683 Dnajb11 protein_coding protein_coding MGP_LPJ_T0043684.1 MGP_LPJ_G0022575.1 mouse_genomes_project 16 20137958 20152579 + MGP_LPJ_P0043684 Dnajb11 protein_coding protein_coding MGP_LPJ_T0043685.1 MGP_LPJ_G0022575.1 mouse_genomes_project 16 20137958 20159748 + MGP_LPJ_P0043685 Dnajb11 protein_coding protein_coding MGP_LPJ_T0043686.1 MGP_LPJ_G0022575.1 mouse_genomes_project 16 20138019 20152218 + Dnajb11 protein_coding processed_transcript MGP_LPJ_T0043687.1 MGP_LPJ_G0022575.1 mouse_genomes_project 16 20149540 20152420 + Dnajb11 protein_coding processed_transcript MGP_LPJ_T0043080.1 MGP_LPJ_G0022439.1 mouse_genomes_project 16 10820381 10860459 + MGP_LPJ_P0043080 Mpv17l protein_coding protein_coding MGP_LPJ_T0043081.1 MGP_LPJ_G0022439.1 mouse_genomes_project 16 10851566 10859682 + MGP_LPJ_P0043081 Mpv17l protein_coding protein_coding MGP_LPJ_T0043082.1 MGP_LPJ_G0022439.1 mouse_genomes_project 16 10851631 10859541 + MGP_LPJ_P0043082 Mpv17l protein_coding nonsense_mediated_decay MGP_LPJ_T0043083.1 MGP_LPJ_G0022439.1 mouse_genomes_project 16 10851638 10857838 + MGP_LPJ_P0043083 Mpv17l protein_coding protein_coding MGP_LPJ_T0043084.1 MGP_LPJ_G0022439.1 mouse_genomes_project 16 10851650 10860410 + MGP_LPJ_P0043084 Mpv17l protein_coding protein_coding MGP_LPJ_T0043085.1 MGP_LPJ_G0022439.1 mouse_genomes_project 16 10852030 10857804 + MGP_LPJ_P0043085 Mpv17l protein_coding protein_coding MGP_LPJ_T0013147.1 MGP_LPJ_G0011238.1 mouse_genomes_project 16 21097735 21099322 - processed_pseudogene processed_pseudogene MGP_LPJ_T0042809.1 MGP_LPJ_G0022370.1 mouse_genomes_project 16 1144893 1155952 + MGP_LPJ_P0042809 Vasn protein_coding protein_coding MGP_LPJ_T0042810.1 MGP_LPJ_G0022370.1 mouse_genomes_project 16 1144920 1152709 + Vasn protein_coding processed_transcript MGP_LPJ_T0043775.1 MGP_LPJ_G0022601.1 mouse_genomes_project 16 24899195 24917611 - MGP_LPJ_P0043775 Uts2b protein_coding protein_coding MGP_LPJ_T0100456.1 MGP_LPJ_G0038719.1 mouse_genomes_project 16 87823161 87823297 - Gm25896 snoRNA snoRNA MGP_LPJ_T0011431.1 MGP_LPJ_G0009549.1 mouse_genomes_project 16 68434227 68434513 + Gm23591 misc_RNA misc_RNA MGP_LPJ_T0013115.1 MGP_LPJ_G0011206.1 mouse_genomes_project 16 6768354 6768561 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010128.1 MGP_LPJ_G0008246.1 mouse_genomes_project 16 10727563 10727652 + Gm27734 miRNA miRNA MGP_LPJ_T0013159.1 MGP_LPJ_G0011250.1 mouse_genomes_project 16 36724033 36725765 + processed_pseudogene processed_pseudogene MGP_LPJ_T0042928.1 MGP_LPJ_G0022402.1 mouse_genomes_project 16 6274579 6715844 - MGP_LPJ_P0042928 protein_coding protein_coding MGP_LPJ_T0042929.1 MGP_LPJ_G0022402.1 mouse_genomes_project 16 6473682 6513462 - protein_coding processed_transcript MGP_LPJ_T0042930.1 MGP_LPJ_G0022402.1 mouse_genomes_project 16 6712596 6716481 - protein_coding retained_intron MGP_LPJ_T0042931.1 MGP_LPJ_G0022402.1 mouse_genomes_project 16 6712596 6715191 - protein_coding retained_intron MGP_LPJ_T0043634.1 MGP_LPJ_G0022559.1 mouse_genomes_project 16 18170760 18172093 - MGP_LPJ_P0043634 Teddm3 protein_coding protein_coding MGP_LPJ_T0011422.1 MGP_LPJ_G0009540.1 mouse_genomes_project 16 17504343 17504618 + Gm23332 misc_RNA misc_RNA MGP_LPJ_T0099202.1 MGP_LPJ_G0037465.1 mouse_genomes_project 16 92058745 92058828 - Gm24695 snRNA snRNA MGP_LPJ_T0010126.1 MGP_LPJ_G0008244.1 mouse_genomes_project 16 10347375 10347462 + Mir365-1 miRNA miRNA MGP_LPJ_T0045026.1 MGP_LPJ_G0022960.1 mouse_genomes_project 16 93120431 93133813 - MGP_LPJ_P0045026 Kcne1 protein_coding protein_coding MGP_LPJ_T0045027.1 MGP_LPJ_G0022960.1 mouse_genomes_project 16 93122766 93133219 - MGP_LPJ_P0045027 Kcne1 protein_coding protein_coding MGP_LPJ_T0043120.1 MGP_LPJ_G0022451.1 mouse_genomes_project 16 12409837 12455793 - MGP_LPJ_P0043120 Ube2v2 protein_coding protein_coding MGP_LPJ_T0044702.1 MGP_LPJ_G0022855.1 mouse_genomes_project 16 72350000 72756553 + MGP_LPJ_P0044702 Robo1 protein_coding protein_coding MGP_LPJ_T0043012.1 MGP_LPJ_G0022424.1 mouse_genomes_project 16 8032260 8067187 - MGP_LPJ_P0043012 Gspt1 protein_coding protein_coding MGP_LPJ_T0043013.1 MGP_LPJ_G0022424.1 mouse_genomes_project 16 8033020 8067126 - MGP_LPJ_P0043013 Gspt1 protein_coding protein_coding MGP_LPJ_T0043014.1 MGP_LPJ_G0022424.1 mouse_genomes_project 16 8033369 8037467 - MGP_LPJ_P0043014 Gspt1 protein_coding protein_coding MGP_LPJ_T0043015.1 MGP_LPJ_G0022424.1 mouse_genomes_project 16 8035553 8041482 - Gspt1 protein_coding retained_intron MGP_LPJ_T0043016.1 MGP_LPJ_G0022424.1 mouse_genomes_project 16 8043869 8050861 - Gspt1 protein_coding retained_intron MGP_LPJ_T0044459.1 MGP_LPJ_G0022766.1 mouse_genomes_project 16 46915393 46930061 + MGP_LPJ_P0044459 Dppa2 protein_coding protein_coding MGP_LPJ_T0013190.1 MGP_LPJ_G0011281.1 mouse_genomes_project 16 92234988 92236373 - processed_pseudogene processed_pseudogene MGP_LPJ_T0000997.1 MGP_LPJ_G0000923.1 mouse_genomes_project 16 77276566 77279956 + TEC TEC MGP_LPJ_T0101906.1 MGP_LPJ_G0039943.1 mouse_genomes_project 16 10830437 10832410 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013128.1 MGP_LPJ_G0011219.1 mouse_genomes_project 16 13269507 13270481 - processed_pseudogene processed_pseudogene MGP_LPJ_T0044117.1 MGP_LPJ_G0022688.1 mouse_genomes_project 16 34485419 34489476 - MGP_LPJ_P0044117 Stfa2 protein_coding protein_coding MGP_LPJ_T0013181.1 MGP_LPJ_G0011272.1 mouse_genomes_project 16 67077739 67078261 - processed_pseudogene processed_pseudogene MGP_LPJ_T0043586.1 MGP_LPJ_G0022552.1 mouse_genomes_project 16 17721964 17735017 + MGP_LPJ_P0043586 Psmd2 protein_coding protein_coding MGP_LPJ_T0043587.1 MGP_LPJ_G0022552.1 mouse_genomes_project 16 17722016 17735017 + MGP_LPJ_P0043587 Psmd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0043588.1 MGP_LPJ_G0022552.1 mouse_genomes_project 16 17722028 17723067 + Psmd2 protein_coding processed_transcript MGP_LPJ_T0043589.1 MGP_LPJ_G0022552.1 mouse_genomes_project 16 17730600 17731310 + Psmd2 protein_coding processed_transcript MGP_LPJ_T0043590.1 MGP_LPJ_G0022552.1 mouse_genomes_project 16 17730945 17731962 + Psmd2 protein_coding processed_transcript MGP_LPJ_T0043591.1 MGP_LPJ_G0022552.1 mouse_genomes_project 16 17731012 17733703 + Psmd2 protein_coding processed_transcript MGP_LPJ_T0003710.1 MGP_LPJ_G0003356.1 mouse_genomes_project 16 97142537 97144650 - Gm15317 antisense antisense MGP_LPJ_T0043811.1 MGP_LPJ_G0022610.1 mouse_genomes_project 16 27750532 27751718 + Hes1 protein_coding processed_transcript MGP_LPJ_T0043812.1 MGP_LPJ_G0022610.1 mouse_genomes_project 16 27751488 27753946 + MGP_LPJ_P0043812 Hes1 protein_coding protein_coding MGP_LPJ_T0043813.1 MGP_LPJ_G0022610.1 mouse_genomes_project 16 27752246 27753273 + Hes1 protein_coding retained_intron MGP_LPJ_T0043814.1 MGP_LPJ_G0022610.1 mouse_genomes_project 16 27752487 27753469 + Hes1 protein_coding processed_transcript MGP_LPJ_T0044820.1 MGP_LPJ_G0022896.1 mouse_genomes_project 16 89257120 89258799 + MGP_LPJ_P0044820 2310034C09Rik protein_coding protein_coding MGP_LPJ_T0044216.1 MGP_LPJ_G0022711.1 mouse_genomes_project 16 36502738 36549032 - MGP_LPJ_P0044216 Maats1 protein_coding protein_coding MGP_LPJ_T0044217.1 MGP_LPJ_G0022711.1 mouse_genomes_project 16 36527827 36548999 - MGP_LPJ_P0044217 Maats1 protein_coding protein_coding MGP_LPJ_T0044218.1 MGP_LPJ_G0022711.1 mouse_genomes_project 16 36537722 36549330 - Maats1 protein_coding processed_transcript MGP_LPJ_T0100441.1 MGP_LPJ_G0038704.1 mouse_genomes_project 16 54951558 54951693 - Gm22422 snoRNA snoRNA MGP_LPJ_T0042857.1 MGP_LPJ_G0022383.1 mouse_genomes_project 16 1521174 1527230 - MGP_LPJ_P0042857 Rogdi protein_coding protein_coding MGP_LPJ_T0042858.1 MGP_LPJ_G0022383.1 mouse_genomes_project 16 1521174 1527240 - MGP_LPJ_P0042858 Rogdi protein_coding protein_coding MGP_LPJ_T0042859.1 MGP_LPJ_G0022383.1 mouse_genomes_project 16 1521199 1527230 - MGP_LPJ_P0042859 Rogdi protein_coding protein_coding MGP_LPJ_T0042860.1 MGP_LPJ_G0022383.1 mouse_genomes_project 16 1521429 1523111 - Rogdi protein_coding retained_intron MGP_LPJ_T0042861.1 MGP_LPJ_G0022383.1 mouse_genomes_project 16 1521668 1522568 - Rogdi protein_coding retained_intron MGP_LPJ_T0042862.1 MGP_LPJ_G0022383.1 mouse_genomes_project 16 1522357 1524275 - Rogdi protein_coding retained_intron MGP_LPJ_T0042863.1 MGP_LPJ_G0022383.1 mouse_genomes_project 16 1522494 1524191 - Rogdi protein_coding retained_intron MGP_LPJ_T0042864.1 MGP_LPJ_G0022383.1 mouse_genomes_project 16 1523306 1527198 - MGP_LPJ_P0042864 Rogdi protein_coding protein_coding MGP_LPJ_T0042865.1 MGP_LPJ_G0022383.1 mouse_genomes_project 16 1524158 1527266 - Rogdi protein_coding retained_intron MGP_LPJ_T0042866.1 MGP_LPJ_G0022383.1 mouse_genomes_project 16 1525882 1527249 - Rogdi protein_coding retained_intron MGP_LPJ_T0013154.1 MGP_LPJ_G0011245.1 mouse_genomes_project 16 30432774 30433383 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011434.1 MGP_LPJ_G0009552.1 mouse_genomes_project 16 94516648 94516929 + Gm22344 misc_RNA misc_RNA MGP_LPJ_T0011427.1 MGP_LPJ_G0009545.1 mouse_genomes_project 16 39602725 39602888 - Gm27587 misc_RNA misc_RNA MGP_LPJ_T0044606.1 MGP_LPJ_G0022810.1 mouse_genomes_project 16 57833718 57852974 - MGP_LPJ_P0044606 Olfr175-ps1 protein_coding protein_coding MGP_LPJ_T0042759.1 MGP_LPJ_G0022361.1 mouse_genomes_project 16 502612 504927 + MGP_LPJ_P0042759 Dnase1 protein_coding protein_coding MGP_LPJ_T0042760.1 MGP_LPJ_G0022361.1 mouse_genomes_project 16 502640 505695 + MGP_LPJ_P0042760 Dnase1 protein_coding protein_coding MGP_LPJ_T0042761.1 MGP_LPJ_G0022361.1 mouse_genomes_project 16 502643 503692 + MGP_LPJ_P0042761 Dnase1 protein_coding protein_coding MGP_LPJ_T0042762.1 MGP_LPJ_G0022361.1 mouse_genomes_project 16 502701 505695 + MGP_LPJ_P0042762 Dnase1 protein_coding protein_coding MGP_LPJ_T0042763.1 MGP_LPJ_G0022361.1 mouse_genomes_project 16 502768 505694 + Dnase1 protein_coding retained_intron MGP_LPJ_T0042764.1 MGP_LPJ_G0022361.1 mouse_genomes_project 16 502771 505695 + Dnase1 protein_coding retained_intron MGP_LPJ_T0042765.1 MGP_LPJ_G0022361.1 mouse_genomes_project 16 502825 505546 + MGP_LPJ_P0042765 Dnase1 protein_coding nonsense_mediated_decay MGP_LPJ_T0042766.1 MGP_LPJ_G0022361.1 mouse_genomes_project 16 502946 503931 + Dnase1 protein_coding retained_intron MGP_LPJ_T0042767.1 MGP_LPJ_G0022361.1 mouse_genomes_project 16 502974 505010 + Dnase1 protein_coding retained_intron MGP_LPJ_T0042768.1 MGP_LPJ_G0022361.1 mouse_genomes_project 16 503892 504542 + Dnase1 protein_coding retained_intron MGP_LPJ_T0042769.1 MGP_LPJ_G0022361.1 mouse_genomes_project 16 504800 505695 + MGP_LPJ_P0042769 Dnase1 protein_coding protein_coding MGP_LPJ_T0043915.1 MGP_LPJ_G0022633.1 mouse_genomes_project 16 30016242 30017008 + MGP_LPJ_P0043915 Bex6 protein_coding protein_coding MGP_LPJ_T0045065.1 MGP_LPJ_G0022970.1 mouse_genomes_project 16 94796133 94806788 - MGP_LPJ_P0045065 Cldn14 protein_coding protein_coding MGP_LPJ_T0045066.1 MGP_LPJ_G0022970.1 mouse_genomes_project 16 94796133 94806538 - MGP_LPJ_P0045066 Cldn14 protein_coding protein_coding MGP_LPJ_T0045067.1 MGP_LPJ_G0022970.1 mouse_genomes_project 16 94796134 94888899 - MGP_LPJ_P0045067 Cldn14 protein_coding protein_coding MGP_LPJ_T0045068.1 MGP_LPJ_G0022970.1 mouse_genomes_project 16 94796851 94806538 - Cldn14 protein_coding processed_transcript MGP_LPJ_T0045069.1 MGP_LPJ_G0022970.1 mouse_genomes_project 16 94796909 94806788 - Cldn14 protein_coding processed_transcript MGP_LPJ_T0003679.1 MGP_LPJ_G0003333.1 mouse_genomes_project 16 31742713 31752428 - Gm15657 antisense antisense MGP_LPJ_T0003680.1 MGP_LPJ_G0003333.1 mouse_genomes_project 16 31750721 31752426 - Gm15657 antisense antisense MGP_LPJ_T0003681.1 MGP_LPJ_G0003333.1 mouse_genomes_project 16 31751052 31753204 - Gm15657 antisense antisense MGP_LPJ_T0044119.1 MGP_LPJ_G0022690.1 mouse_genomes_project 16 34601618 34674094 - MGP_LPJ_P0044119 Casr protein_coding protein_coding MGP_LPJ_T0044120.1 MGP_LPJ_G0022690.1 mouse_genomes_project 16 34601618 34674094 - MGP_LPJ_P0044120 Casr protein_coding protein_coding MGP_LPJ_T0044121.1 MGP_LPJ_G0022690.1 mouse_genomes_project 16 34602389 34673566 - MGP_LPJ_P0044121 Casr protein_coding protein_coding MGP_LPJ_T0044122.1 MGP_LPJ_G0022690.1 mouse_genomes_project 16 34625740 34674101 - Casr protein_coding processed_transcript MGP_LPJ_T0044637.1 MGP_LPJ_G0022830.1 mouse_genomes_project 16 58398075 58398993 - MGP_LPJ_P0044637 Olfr205 protein_coding protein_coding MGP_LPJ_T0043040.1 MGP_LPJ_G0022431.1 mouse_genomes_project 16 10137131 10304660 + MGP_LPJ_P0043040 Mkl2 protein_coding protein_coding MGP_LPJ_T0043041.1 MGP_LPJ_G0022431.1 mouse_genomes_project 16 10137156 10216044 + MGP_LPJ_P0043041 Mkl2 protein_coding protein_coding MGP_LPJ_T0043042.1 MGP_LPJ_G0022431.1 mouse_genomes_project 16 10145777 10216041 + MGP_LPJ_P0043042 Mkl2 protein_coding protein_coding MGP_LPJ_T0043043.1 MGP_LPJ_G0022431.1 mouse_genomes_project 16 10241468 10307860 + MGP_LPJ_P0043043 Mkl2 protein_coding protein_coding MGP_LPJ_T0000992.1 MGP_LPJ_G0000919.1 mouse_genomes_project 16 75936754 75938414 + TEC TEC MGP_LPJ_T0043475.1 MGP_LPJ_G0022524.1 mouse_genomes_project 16 15895581 15948811 + MGP_LPJ_P0043475 Hira protein_coding protein_coding MGP_LPJ_T0043476.1 MGP_LPJ_G0022524.1 mouse_genomes_project 16 15895610 15991052 + MGP_LPJ_P0043476 Hira protein_coding protein_coding MGP_LPJ_T0043477.1 MGP_LPJ_G0022524.1 mouse_genomes_project 16 15895814 15930365 + Hira protein_coding retained_intron MGP_LPJ_T0043478.1 MGP_LPJ_G0022524.1 mouse_genomes_project 16 15895814 15955741 + MGP_LPJ_P0043478 Hira protein_coding nonsense_mediated_decay MGP_LPJ_T0043479.1 MGP_LPJ_G0022524.1 mouse_genomes_project 16 15895956 15936957 + Hira protein_coding retained_intron MGP_LPJ_T0043480.1 MGP_LPJ_G0022524.1 mouse_genomes_project 16 15943858 15946443 + Hira protein_coding processed_transcript MGP_LPJ_T0043481.1 MGP_LPJ_G0022524.1 mouse_genomes_project 16 15946362 15955796 + Hira protein_coding retained_intron MGP_LPJ_T0043482.1 MGP_LPJ_G0022524.1 mouse_genomes_project 16 15953673 15968171 + Hira protein_coding processed_transcript MGP_LPJ_T0045115.1 MGP_LPJ_G0022977.1 mouse_genomes_project 16 95476886 95607615 + MGP_LPJ_P0045115 Dyrk1a protein_coding protein_coding MGP_LPJ_T0045116.1 MGP_LPJ_G0022977.1 mouse_genomes_project 16 95477364 95604902 + MGP_LPJ_P0045116 Dyrk1a protein_coding protein_coding MGP_LPJ_T0045117.1 MGP_LPJ_G0022977.1 mouse_genomes_project 16 95477749 95575425 + MGP_LPJ_P0045117 Dyrk1a protein_coding protein_coding MGP_LPJ_T0045118.1 MGP_LPJ_G0022977.1 mouse_genomes_project 16 95477792 95608065 + MGP_LPJ_P0045118 Dyrk1a protein_coding protein_coding MGP_LPJ_T0045119.1 MGP_LPJ_G0022977.1 mouse_genomes_project 16 95477792 95578309 + MGP_LPJ_P0045119 Dyrk1a protein_coding protein_coding MGP_LPJ_T0045120.1 MGP_LPJ_G0022977.1 mouse_genomes_project 16 95578373 95588706 + Dyrk1a protein_coding retained_intron MGP_LPJ_T0043354.1 MGP_LPJ_G0022496.1 mouse_genomes_project 16 14871002 14882314 - MGP_LPJ_P0043354 Dgcr14 protein_coding protein_coding MGP_LPJ_T0044427.1 MGP_LPJ_G0022758.1 mouse_genomes_project 16 44233249 44247729 - MGP_LPJ_P0044427 Tagln3 protein_coding protein_coding MGP_LPJ_T0101279.1 MGP_LPJ_G0039510.1 mouse_genomes_project 16 12330079 12330763 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0013142.1 MGP_LPJ_G0011233.1 mouse_genomes_project 16 19267608 19268032 + processed_pseudogene processed_pseudogene MGP_LPJ_T0044091.1 MGP_LPJ_G0022677.1 mouse_genomes_project 16 34065987 34094686 + Kpna1 protein_coding retained_intron MGP_LPJ_T0044092.1 MGP_LPJ_G0022677.1 mouse_genomes_project 16 34072503 34131025 + MGP_LPJ_P0044092 Kpna1 protein_coding protein_coding MGP_LPJ_T0044093.1 MGP_LPJ_G0022677.1 mouse_genomes_project 16 34072513 34096466 + Kpna1 protein_coding retained_intron MGP_LPJ_T0044094.1 MGP_LPJ_G0022677.1 mouse_genomes_project 16 34072542 34112383 + MGP_LPJ_P0044094 Kpna1 protein_coding nonsense_mediated_decay MGP_LPJ_T0044095.1 MGP_LPJ_G0022677.1 mouse_genomes_project 16 34072770 34106016 + MGP_LPJ_P0044095 Kpna1 protein_coding protein_coding MGP_LPJ_T0044096.1 MGP_LPJ_G0022677.1 mouse_genomes_project 16 34090192 34127802 + MGP_LPJ_P0044096 Kpna1 protein_coding nonsense_mediated_decay MGP_LPJ_T0044097.1 MGP_LPJ_G0022677.1 mouse_genomes_project 16 34090258 34114743 + MGP_LPJ_P0044097 Kpna1 protein_coding nonsense_mediated_decay MGP_LPJ_T0044098.1 MGP_LPJ_G0022677.1 mouse_genomes_project 16 34106899 34129025 + MGP_LPJ_P0044098 Kpna1 protein_coding nonsense_mediated_decay MGP_LPJ_T0044099.1 MGP_LPJ_G0022677.1 mouse_genomes_project 16 34112482 34127762 + MGP_LPJ_P0044099 Kpna1 protein_coding protein_coding MGP_LPJ_T0044100.1 MGP_LPJ_G0022677.1 mouse_genomes_project 16 34114741 34125668 + Kpna1 protein_coding retained_intron MGP_LPJ_T0003678.1 MGP_LPJ_G0003332.1 mouse_genomes_project 16 31725278 31743470 - Gm15658 antisense antisense MGP_LPJ_T0003684.1 MGP_LPJ_G0003336.1 mouse_genomes_project 16 34054006 34069999 - Gm15564 antisense antisense MGP_LPJ_T0003685.1 MGP_LPJ_G0003336.1 mouse_genomes_project 16 34054007 34072419 - Gm15564 antisense antisense MGP_LPJ_T0003686.1 MGP_LPJ_G0003336.1 mouse_genomes_project 16 34054029 34070059 - Gm15564 antisense antisense MGP_LPJ_T0043128.1 MGP_LPJ_G0022456.1 mouse_genomes_project 16 13107034 13120582 + MGP_LPJ_P0043128 Pkp2 protein_coding protein_coding MGP_LPJ_T0043129.1 MGP_LPJ_G0022456.1 mouse_genomes_project 16 13107034 13141649 + MGP_LPJ_P0043129 Pkp2 protein_coding protein_coding MGP_LPJ_T0043130.1 MGP_LPJ_G0022456.1 mouse_genomes_project 16 13107034 13165774 + MGP_LPJ_P0043130 Pkp2 protein_coding protein_coding MGP_LPJ_T0044871.1 MGP_LPJ_G0022929.1 mouse_genomes_project 16 90839293 90896443 - MGP_LPJ_P0044871 Scaf4 protein_coding protein_coding MGP_LPJ_T0044872.1 MGP_LPJ_G0022929.1 mouse_genomes_project 16 90839492 90896560 - MGP_LPJ_P0044872 Scaf4 protein_coding protein_coding MGP_LPJ_T0044684.1 MGP_LPJ_G0022849.1 mouse_genomes_project 16 64860687 64885709 - MGP_LPJ_P0044684 Chmp2b protein_coding protein_coding MGP_LPJ_T0099180.1 MGP_LPJ_G0037443.1 mouse_genomes_project 16 34519899 34520003 + Gm22263 snRNA snRNA MGP_LPJ_T0044567.1 MGP_LPJ_G0022799.1 mouse_genomes_project 16 56232935 56254464 - MGP_LPJ_P0044567 Tmem30c protein_coding protein_coding MGP_LPJ_T0044568.1 MGP_LPJ_G0022799.1 mouse_genomes_project 16 56233207 56254450 - MGP_LPJ_P0044568 Tmem30c protein_coding protein_coding MGP_LPJ_T0044569.1 MGP_LPJ_G0022799.1 mouse_genomes_project 16 56236087 56254450 - MGP_LPJ_P0044569 Tmem30c protein_coding protein_coding MGP_LPJ_T0044259.1 MGP_LPJ_G0022722.1 mouse_genomes_project 16 36957895 36987637 + MGP_LPJ_P0044259 protein_coding protein_coding MGP_LPJ_T0044260.1 MGP_LPJ_G0022722.1 mouse_genomes_project 16 36957897 36987436 + MGP_LPJ_P0044260 protein_coding protein_coding MGP_LPJ_T0044261.1 MGP_LPJ_G0022722.1 mouse_genomes_project 16 36957927 36987436 + MGP_LPJ_P0044261 protein_coding nonsense_mediated_decay MGP_LPJ_T0044262.1 MGP_LPJ_G0022722.1 mouse_genomes_project 16 36974221 36987442 + MGP_LPJ_P0044262 protein_coding protein_coding MGP_LPJ_T0044263.1 MGP_LPJ_G0022722.1 mouse_genomes_project 16 36981479 36984866 + protein_coding retained_intron MGP_LPJ_T0043200.1 MGP_LPJ_G0022467.1 mouse_genomes_project 16 13978528 14002966 - MGP_LPJ_P0043200 Ppil2 protein_coding protein_coding MGP_LPJ_T0043201.1 MGP_LPJ_G0022467.1 mouse_genomes_project 16 13978528 14002971 - MGP_LPJ_P0043201 Ppil2 protein_coding protein_coding MGP_LPJ_T0043202.1 MGP_LPJ_G0022467.1 mouse_genomes_project 16 13979289 14002956 - MGP_LPJ_P0043202 Ppil2 protein_coding protein_coding MGP_LPJ_T0043203.1 MGP_LPJ_G0022467.1 mouse_genomes_project 16 13980579 13981433 - Ppil2 protein_coding retained_intron MGP_LPJ_T0043204.1 MGP_LPJ_G0022467.1 mouse_genomes_project 16 13982075 13983491 - Ppil2 protein_coding retained_intron MGP_LPJ_T0043205.1 MGP_LPJ_G0022467.1 mouse_genomes_project 16 13984820 13995591 - Ppil2 protein_coding retained_intron MGP_LPJ_T0043206.1 MGP_LPJ_G0022467.1 mouse_genomes_project 16 13986894 13989118 - Ppil2 protein_coding retained_intron MGP_LPJ_T0043207.1 MGP_LPJ_G0022467.1 mouse_genomes_project 16 13987734 14002929 - MGP_LPJ_P0043207 Ppil2 protein_coding protein_coding MGP_LPJ_T0043208.1 MGP_LPJ_G0022467.1 mouse_genomes_project 16 13988677 14002950 - Ppil2 protein_coding processed_transcript MGP_LPJ_T0043209.1 MGP_LPJ_G0022467.1 mouse_genomes_project 16 13988982 14002927 - Ppil2 protein_coding retained_intron MGP_LPJ_T0043210.1 MGP_LPJ_G0022467.1 mouse_genomes_project 16 13998948 14002950 - Ppil2 protein_coding processed_transcript MGP_LPJ_T0043211.1 MGP_LPJ_G0022467.1 mouse_genomes_project 16 14000563 14002946 - Ppil2 protein_coding retained_intron MGP_LPJ_T0043774.1 MGP_LPJ_G0022600.1 mouse_genomes_project 16 24849893 24896634 + MGP_LPJ_P0043774 Ostn protein_coding protein_coding MGP_LPJ_T0043682.1 MGP_LPJ_G0022574.1 mouse_genomes_project 16 20091177 20137635 - MGP_LPJ_P0043682 Tbccd1 protein_coding unknown_likely_coding MGP_LPJ_T0043193.1 MGP_LPJ_G0022466.1 mouse_genomes_project 16 13961293 13978710 + MGP_LPJ_P0043193 Ypel1 protein_coding protein_coding MGP_LPJ_T0043194.1 MGP_LPJ_G0022466.1 mouse_genomes_project 16 13961755 13978315 + Ypel1 protein_coding processed_transcript MGP_LPJ_T0043195.1 MGP_LPJ_G0022466.1 mouse_genomes_project 16 13961795 13970212 + Ypel1 protein_coding retained_intron MGP_LPJ_T0043196.1 MGP_LPJ_G0022466.1 mouse_genomes_project 16 13961796 13974068 + MGP_LPJ_P0043196 Ypel1 protein_coding protein_coding MGP_LPJ_T0043197.1 MGP_LPJ_G0022466.1 mouse_genomes_project 16 13961823 13979019 + MGP_LPJ_P0043197 Ypel1 protein_coding nonsense_mediated_decay MGP_LPJ_T0043198.1 MGP_LPJ_G0022466.1 mouse_genomes_project 16 13961826 13974150 + MGP_LPJ_P0043198 Ypel1 protein_coding protein_coding MGP_LPJ_T0043199.1 MGP_LPJ_G0022466.1 mouse_genomes_project 16 13961901 13974668 + MGP_LPJ_P0043199 Ypel1 protein_coding protein_coding MGP_LPJ_T0044462.1 MGP_LPJ_G0022769.1 mouse_genomes_project 16 47447662 47449698 + MGP_LPJ_P0044462 Retnlb protein_coding protein_coding MGP_LPJ_T0044510.1 MGP_LPJ_G0022783.1 mouse_genomes_project 16 54743007 54798561 - MGP_LPJ_P0044510 Nxpe3 protein_coding unknown_likely_coding MGP_LPJ_T0098182.1 MGP_LPJ_G0036463.1 mouse_genomes_project 16 1856282 1856404 - n-R5s30 rRNA rRNA MGP_LPJ_T0017469.1 MGP_LPJ_G0015246.1 mouse_genomes_project 16 92416816 92448857 + Gm10785 processed_transcript processed_transcript MGP_LPJ_T0044131.1 MGP_LPJ_G0022693.1 mouse_genomes_project 16 34873733 34905253 - MGP_LPJ_P0044131 Slc15a2 protein_coding protein_coding MGP_LPJ_T0044132.1 MGP_LPJ_G0022693.1 mouse_genomes_project 16 34875333 34905111 - MGP_LPJ_P0044132 Slc15a2 protein_coding protein_coding MGP_LPJ_T0044133.1 MGP_LPJ_G0022693.1 mouse_genomes_project 16 34875333 34905083 - MGP_LPJ_P0044133 Slc15a2 protein_coding nonsense_mediated_decay MGP_LPJ_T0044134.1 MGP_LPJ_G0022693.1 mouse_genomes_project 16 34875871 34878314 - Slc15a2 protein_coding retained_intron MGP_LPJ_T0044135.1 MGP_LPJ_G0022693.1 mouse_genomes_project 16 34878013 34878963 - Slc15a2 protein_coding processed_transcript MGP_LPJ_T0044136.1 MGP_LPJ_G0022693.1 mouse_genomes_project 16 34879453 34880260 - Slc15a2 protein_coding retained_intron MGP_LPJ_T0044137.1 MGP_LPJ_G0022693.1 mouse_genomes_project 16 34880677 34886410 - Slc15a2 protein_coding retained_intron MGP_LPJ_T0044138.1 MGP_LPJ_G0022693.1 mouse_genomes_project 16 34880724 34886220 - Slc15a2 protein_coding retained_intron MGP_LPJ_T0044139.1 MGP_LPJ_G0022693.1 mouse_genomes_project 16 34884754 34886136 - Slc15a2 protein_coding retained_intron MGP_LPJ_T0044140.1 MGP_LPJ_G0022693.1 mouse_genomes_project 16 34891803 34905231 - MGP_LPJ_P0044140 Slc15a2 protein_coding protein_coding MGP_LPJ_T0044141.1 MGP_LPJ_G0022693.1 mouse_genomes_project 16 34891806 34905215 - MGP_LPJ_P0044141 Slc15a2 protein_coding protein_coding MGP_LPJ_T0044142.1 MGP_LPJ_G0022693.1 mouse_genomes_project 16 34892000 34893208 - Slc15a2 protein_coding retained_intron MGP_LPJ_T0044143.1 MGP_LPJ_G0022693.1 mouse_genomes_project 16 34901676 34902756 - Slc15a2 protein_coding retained_intron MGP_LPJ_T0043400.1 MGP_LPJ_G0022509.1 mouse_genomes_project 16 15294836 15318391 - MGP_LPJ_P0043400 Tango2 protein_coding nonsense_mediated_decay MGP_LPJ_T0043401.1 MGP_LPJ_G0022509.1 mouse_genomes_project 16 15294838 15337670 - MGP_LPJ_P0043401 Tango2 protein_coding protein_coding MGP_LPJ_T0043402.1 MGP_LPJ_G0022509.1 mouse_genomes_project 16 15295234 15298157 - Tango2 protein_coding retained_intron MGP_LPJ_T0043403.1 MGP_LPJ_G0022509.1 mouse_genomes_project 16 15301998 15305465 - Tango2 protein_coding processed_transcript MGP_LPJ_T0043404.1 MGP_LPJ_G0022509.1 mouse_genomes_project 16 15304791 15307046 - Tango2 protein_coding retained_intron MGP_LPJ_T0043405.1 MGP_LPJ_G0022509.1 mouse_genomes_project 16 15304899 15341778 - MGP_LPJ_P0043405 Tango2 protein_coding nonsense_mediated_decay MGP_LPJ_T0043406.1 MGP_LPJ_G0022509.1 mouse_genomes_project 16 15304907 15337645 - MGP_LPJ_P0043406 Tango2 protein_coding protein_coding MGP_LPJ_T0043407.1 MGP_LPJ_G0022509.1 mouse_genomes_project 16 15306436 15318392 - Tango2 protein_coding retained_intron MGP_LPJ_T0043408.1 MGP_LPJ_G0022509.1 mouse_genomes_project 16 15310279 15318392 - Tango2 protein_coding retained_intron MGP_LPJ_T0043409.1 MGP_LPJ_G0022509.1 mouse_genomes_project 16 15314791 15341758 - Tango2 protein_coding retained_intron MGP_LPJ_T0044818.1 MGP_LPJ_G0022894.1 mouse_genomes_project 16 89225603 89226351 + MGP_LPJ_P0044818 Krtap13-1 protein_coding protein_coding MGP_LPJ_T0042824.1 MGP_LPJ_G0022373.1 mouse_genomes_project 16 1233844 1268568 + MGP_LPJ_P0042824 Hmox2 protein_coding protein_coding MGP_LPJ_T0042825.1 MGP_LPJ_G0022373.1 mouse_genomes_project 16 1233846 1270462 + MGP_LPJ_P0042825 Hmox2 protein_coding protein_coding MGP_LPJ_T0042826.1 MGP_LPJ_G0022373.1 mouse_genomes_project 16 1252055 1269969 + MGP_LPJ_P0042826 Hmox2 protein_coding protein_coding MGP_LPJ_T0042828.1 MGP_LPJ_G0022373.1 mouse_genomes_project 16 1260760 1269965 + MGP_LPJ_P0042828 Hmox2 protein_coding protein_coding MGP_LPJ_T0042829.1 MGP_LPJ_G0022373.1 mouse_genomes_project 16 1260767 1268810 + MGP_LPJ_P0042829 Hmox2 protein_coding protein_coding MGP_LPJ_T0044106.1 MGP_LPJ_G0022681.1 mouse_genomes_project 16 34217467 34229707 - MGP_LPJ_P0044106 Csta1 protein_coding protein_coding MGP_LPJ_T0044107.1 MGP_LPJ_G0022681.1 mouse_genomes_project 16 34219690 34229671 - MGP_LPJ_P0044107 Csta1 protein_coding protein_coding MGP_LPJ_T0045215.1 MGP_LPJ_G0022998.1 mouse_genomes_project 16 98890271 98952580 - MGP_LPJ_P0045215 Prdm15 protein_coding protein_coding MGP_LPJ_T0045216.1 MGP_LPJ_G0022998.1 mouse_genomes_project 16 98890324 98953203 - MGP_LPJ_P0045216 Prdm15 protein_coding protein_coding MGP_LPJ_T0045217.1 MGP_LPJ_G0022998.1 mouse_genomes_project 16 98890681 98953136 - MGP_LPJ_P0045217 Prdm15 protein_coding nonsense_mediated_decay MGP_LPJ_T0045218.1 MGP_LPJ_G0022998.1 mouse_genomes_project 16 98891134 98899128 - Prdm15 protein_coding retained_intron MGP_LPJ_T0045219.1 MGP_LPJ_G0022998.1 mouse_genomes_project 16 98892982 98941314 - MGP_LPJ_P0045219 Prdm15 protein_coding unknown_likely_coding MGP_LPJ_T0045220.1 MGP_LPJ_G0022998.1 mouse_genomes_project 16 98893320 98902996 - Prdm15 protein_coding processed_transcript MGP_LPJ_T0045221.1 MGP_LPJ_G0022998.1 mouse_genomes_project 16 98894547 98896745 - Prdm15 protein_coding retained_intron MGP_LPJ_T0045222.1 MGP_LPJ_G0022998.1 mouse_genomes_project 16 98920174 98931113 - Prdm15 protein_coding retained_intron MGP_LPJ_T0045223.1 MGP_LPJ_G0022998.1 mouse_genomes_project 16 98936720 98941322 - Prdm15 protein_coding retained_intron MGP_LPJ_T0045224.1 MGP_LPJ_G0022998.1 mouse_genomes_project 16 98937138 98950239 - MGP_LPJ_P0045224 Prdm15 protein_coding protein_coding MGP_LPJ_T0045225.1 MGP_LPJ_G0022998.1 mouse_genomes_project 16 98939035 98952580 - MGP_LPJ_P0045225 Prdm15 protein_coding protein_coding MGP_LPJ_T0043493.1 MGP_LPJ_G0022534.1 mouse_genomes_project 16 16704405 16757391 - MGP_LPJ_P0043493 Lamp3 protein_coding protein_coding MGP_LPJ_T0043053.1 MGP_LPJ_G0022435.1 mouse_genomes_project 16 10613347 10628630 - MGP_LPJ_P0043053 Pla2g10 protein_coding protein_coding MGP_LPJ_T0043054.1 MGP_LPJ_G0022435.1 mouse_genomes_project 16 10613349 10629170 - MGP_LPJ_P0043054 Pla2g10 protein_coding protein_coding MGP_LPJ_T0043055.1 MGP_LPJ_G0022435.1 mouse_genomes_project 16 10613684 10628906 - Pla2g10 protein_coding processed_transcript MGP_LPJ_T0043056.1 MGP_LPJ_G0022435.1 mouse_genomes_project 16 10623361 10628866 - Pla2g10 protein_coding processed_transcript MGP_LPJ_T0013143.1 MGP_LPJ_G0011234.1 mouse_genomes_project 16 19460270 19460940 + processed_pseudogene processed_pseudogene MGP_LPJ_T0044817.1 MGP_LPJ_G0022893.1 mouse_genomes_project 16 89204049 89204843 - MGP_LPJ_P0044817 2310061N02Rik protein_coding protein_coding MGP_LPJ_T0044480.1 MGP_LPJ_G0022775.1 mouse_genomes_project 16 48367734 48431637 + MGP_LPJ_P0044480 Ift57 protein_coding protein_coding MGP_LPJ_T0044481.1 MGP_LPJ_G0022775.1 mouse_genomes_project 16 48367805 48429141 + MGP_LPJ_P0044481 Ift57 protein_coding protein_coding MGP_LPJ_T0044482.1 MGP_LPJ_G0022775.1 mouse_genomes_project 16 48367856 48381948 + Ift57 protein_coding processed_transcript MGP_LPJ_T0044483.1 MGP_LPJ_G0022775.1 mouse_genomes_project 16 48381002 48430627 + MGP_LPJ_P0044483 Ift57 protein_coding protein_coding MGP_LPJ_T0013127.1 MGP_LPJ_G0011218.1 mouse_genomes_project 16 12755024 12755307 + processed_pseudogene processed_pseudogene MGP_LPJ_T0043101.1 MGP_LPJ_G0022445.1 mouse_genomes_project 16 11238823 11257998 - Fopnl protein_coding processed_transcript MGP_LPJ_T0043102.1 MGP_LPJ_G0022445.1 mouse_genomes_project 16 11239511 11257987 - MGP_LPJ_P0043102 Fopnl protein_coding protein_coding MGP_LPJ_T0013158.1 MGP_LPJ_G0011249.1 mouse_genomes_project 16 35354778 35355625 - processed_pseudogene processed_pseudogene MGP_LPJ_T0043738.1 MGP_LPJ_G0022586.1 mouse_genomes_project 16 20822809 20893701 - MGP_LPJ_P0043738 Masp1 protein_coding protein_coding MGP_LPJ_T0043739.1 MGP_LPJ_G0022586.1 mouse_genomes_project 16 20851153 20893661 - MGP_LPJ_P0043739 Masp1 protein_coding unknown_likely_coding MGP_LPJ_T0000989.1 MGP_LPJ_G0000916.1 mouse_genomes_project 16 41712531 41712878 - TEC TEC MGP_LPJ_T0001008.1 MGP_LPJ_G0000934.1 mouse_genomes_project 16 91965753 91966554 + TEC TEC MGP_LPJ_T0100413.1 MGP_LPJ_G0038676.1 mouse_genomes_project 16 10423667 10423791 - Gm25276 snoRNA snoRNA MGP_LPJ_T0044401.1 MGP_LPJ_G0022751.1 mouse_genomes_project 16 43736191 43763631 + MGP_LPJ_P0044401 Btla protein_coding protein_coding MGP_LPJ_T0044402.1 MGP_LPJ_G0022751.1 mouse_genomes_project 16 43736213 43763634 + MGP_LPJ_P0044402 Btla protein_coding protein_coding MGP_LPJ_T0100449.1 MGP_LPJ_G0038712.1 mouse_genomes_project 16 74360915 74361061 + Gm26307 snoRNA snoRNA MGP_LPJ_T0044815.1 MGP_LPJ_G0022891.1 mouse_genomes_project 16 89141745 89142718 - MGP_LPJ_P0044815 Krtap26-1 protein_coding protein_coding MGP_LPJ_T0042710.1 MGP_LPJ_G0022350.1 mouse_genomes_project 16 175296 186172 - MGP_LPJ_P0042710 Mefv protein_coding protein_coding MGP_LPJ_T0042711.1 MGP_LPJ_G0022350.1 mouse_genomes_project 16 175296 186172 - MGP_LPJ_P0042711 Mefv protein_coding protein_coding MGP_LPJ_T0044632.1 MGP_LPJ_G0022825.1 mouse_genomes_project 16 58260978 58261877 - MGP_LPJ_P0044632 Olfr198 protein_coding protein_coding MGP_LPJ_T0101277.1 MGP_LPJ_G0039509.1 mouse_genomes_project 16 702800 704774 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101278.1 MGP_LPJ_G0039509.1 mouse_genomes_project 16 703868 704667 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0013176.1 MGP_LPJ_G0011267.1 mouse_genomes_project 16 59531909 59532312 - processed_pseudogene processed_pseudogene MGP_LPJ_T0043840.1 MGP_LPJ_G0022617.1 mouse_genomes_project 16 28336819 28339894 + MGP_LPJ_P0043840 Fam43a protein_coding protein_coding MGP_LPJ_T0100440.1 MGP_LPJ_G0038703.1 mouse_genomes_project 16 53472438 53472563 + Gm23180 snoRNA snoRNA MGP_LPJ_T0043259.1 MGP_LPJ_G0022478.1 mouse_genomes_project 16 14317563 14342972 + MGP_LPJ_P0043259 Snap29 protein_coding protein_coding MGP_LPJ_T0044737.1 MGP_LPJ_G0022866.1 mouse_genomes_project 16 78253656 78272715 - MGP_LPJ_P0044737 Gm7334 protein_coding protein_coding MGP_LPJ_T0098183.1 MGP_LPJ_G0036464.1 mouse_genomes_project 16 5532501 5532594 - Gm22224 rRNA rRNA MGP_LPJ_T0013175.1 MGP_LPJ_G0011266.1 mouse_genomes_project 16 55877397 55878340 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017437.1 MGP_LPJ_G0015234.1 mouse_genomes_project 16 30888523 31018973 - Gm17106 processed_transcript processed_transcript MGP_LPJ_T0044829.1 MGP_LPJ_G0022903.1 mouse_genomes_project 16 89390599 89391126 - MGP_LPJ_P0044829 Krtap19-3 protein_coding protein_coding MGP_LPJ_T0003690.1 MGP_LPJ_G0003340.1 mouse_genomes_project 16 36784644 36788622 - Gm17103 antisense antisense MGP_LPJ_T0006858.1 MGP_LPJ_G0005657.1 mouse_genomes_project 16 27685145 27697755 + 4632428C04Rik lincRNA lincRNA MGP_LPJ_T0099159.1 MGP_LPJ_G0037422.1 mouse_genomes_project 16 14103416 14103534 - Gm22129 snRNA snRNA MGP_LPJ_T0044079.1 MGP_LPJ_G0022673.1 mouse_genomes_project 16 33842214 33906972 + MGP_LPJ_P0044079 Hspbap1 protein_coding protein_coding MGP_LPJ_T0013180.1 MGP_LPJ_G0011271.1 mouse_genomes_project 16 64226934 64227847 + processed_pseudogene processed_pseudogene MGP_LPJ_T0098506.1 MGP_LPJ_G0036782.1 mouse_genomes_project 16 23530699 23539479 - AU015336 sense_intronic sense_intronic MGP_LPJ_T0044839.1 MGP_LPJ_G0022913.1 mouse_genomes_project 16 89568685 89569285 - MGP_LPJ_P0044839 Krtap6-5 protein_coding protein_coding MGP_LPJ_T0043776.1 MGP_LPJ_G0022602.1 mouse_genomes_project 16 24938091 24995462 + MGP_LPJ_P0043776 Ccdc50 protein_coding protein_coding MGP_LPJ_T0043777.1 MGP_LPJ_G0022602.1 mouse_genomes_project 16 24938202 24989639 + MGP_LPJ_P0043777 Ccdc50 protein_coding protein_coding MGP_LPJ_T0043778.1 MGP_LPJ_G0022602.1 mouse_genomes_project 16 24938202 24982946 + MGP_LPJ_P0043778 Ccdc50 protein_coding protein_coding MGP_LPJ_T0043779.1 MGP_LPJ_G0022602.1 mouse_genomes_project 16 24939158 24981626 + MGP_LPJ_P0043779 Ccdc50 protein_coding protein_coding MGP_LPJ_T0043780.1 MGP_LPJ_G0022602.1 mouse_genomes_project 16 24939190 24940313 + Ccdc50 protein_coding processed_transcript MGP_LPJ_T0044371.1 MGP_LPJ_G0022745.1 mouse_genomes_project 16 43272298 43350159 + MGP_LPJ_P0044371 Cd200r4 protein_coding protein_coding MGP_LPJ_T0044372.1 MGP_LPJ_G0022745.1 mouse_genomes_project 16 43272321 43350158 + MGP_LPJ_P0044372 Cd200r4 protein_coding protein_coding MGP_LPJ_T0044373.1 MGP_LPJ_G0022745.1 mouse_genomes_project 16 43329902 43350175 + MGP_LPJ_P0044373 Cd200r4 protein_coding protein_coding MGP_LPJ_T0011432.1 MGP_LPJ_G0009550.1 mouse_genomes_project 16 81322264 81322577 - Gm26023 misc_RNA misc_RNA MGP_LPJ_T0044771.1 MGP_LPJ_G0022876.1 mouse_genomes_project 16 85742489 85873007 - MGP_LPJ_P0044771 Cyyr1 protein_coding protein_coding MGP_LPJ_T0044772.1 MGP_LPJ_G0022876.1 mouse_genomes_project 16 85777952 85873007 - MGP_LPJ_P0044772 Cyyr1 protein_coding protein_coding MGP_LPJ_T0044938.1 MGP_LPJ_G0022946.1 mouse_genomes_project 16 92272544 92290903 + MGP_LPJ_P0044938 Ifngr2 protein_coding protein_coding MGP_LPJ_T0044939.1 MGP_LPJ_G0022946.1 mouse_genomes_project 16 92273241 92286388 + MGP_LPJ_P0044939 Ifngr2 protein_coding nonsense_mediated_decay MGP_LPJ_T0044940.1 MGP_LPJ_G0022946.1 mouse_genomes_project 16 92287061 92290903 + Ifngr2 protein_coding processed_transcript MGP_LPJ_T0100421.1 MGP_LPJ_G0038684.1 mouse_genomes_project 16 20464805 20464934 + Gm26447 snoRNA snoRNA MGP_LPJ_T0099183.1 MGP_LPJ_G0037446.1 mouse_genomes_project 16 37135251 37135350 + Gm22500 snRNA snRNA MGP_LPJ_T0044620.1 MGP_LPJ_G0022817.1 mouse_genomes_project 16 58057686 58061658 - MGP_LPJ_P0044620 Olfr187 protein_coding protein_coding MGP_LPJ_T0044621.1 MGP_LPJ_G0022817.1 mouse_genomes_project 16 58057686 58058664 - MGP_LPJ_P0044621 Olfr187 protein_coding protein_coding MGP_LPJ_T0044622.1 MGP_LPJ_G0022817.1 mouse_genomes_project 16 58058211 58061676 - MGP_LPJ_P0044622 Olfr187 protein_coding protein_coding MGP_LPJ_T0010120.1 MGP_LPJ_G0008238.1 mouse_genomes_project 16 1743702 1743788 - Mir6364 miRNA miRNA MGP_LPJ_T0043654.1 MGP_LPJ_G0022564.1 mouse_genomes_project 16 19093381 19141460 + MGP_LPJ_P0043654 Map3k13 protein_coding protein_coding MGP_LPJ_T0043772.1 MGP_LPJ_G0022599.1 mouse_genomes_project 16 24491041 24525088 - MGP_LPJ_P0043772 Gmnc protein_coding protein_coding MGP_LPJ_T0043773.1 MGP_LPJ_G0022599.1 mouse_genomes_project 16 24494040 24503063 - MGP_LPJ_P0043773 Gmnc protein_coding unknown_likely_coding MGP_LPJ_T0043618.1 MGP_LPJ_G0022555.1 mouse_genomes_project 16 17776621 17790030 - MGP_LPJ_P0043618 Clcn2 protein_coding protein_coding MGP_LPJ_T0043619.1 MGP_LPJ_G0022555.1 mouse_genomes_project 16 17776645 17790027 - Clcn2 protein_coding retained_intron MGP_LPJ_T0043620.1 MGP_LPJ_G0022555.1 mouse_genomes_project 16 17776655 17790077 - Clcn2 protein_coding retained_intron MGP_LPJ_T0043621.1 MGP_LPJ_G0022555.1 mouse_genomes_project 16 17776880 17790024 - MGP_LPJ_P0043621 Clcn2 protein_coding protein_coding MGP_LPJ_T0043622.1 MGP_LPJ_G0022555.1 mouse_genomes_project 16 17779195 17791605 - MGP_LPJ_P0043622 Clcn2 protein_coding nonsense_mediated_decay MGP_LPJ_T0043623.1 MGP_LPJ_G0022555.1 mouse_genomes_project 16 17780831 17782781 - Clcn2 protein_coding retained_intron MGP_LPJ_T0043624.1 MGP_LPJ_G0022555.1 mouse_genomes_project 16 17781363 17782392 - Clcn2 protein_coding retained_intron MGP_LPJ_T0043625.1 MGP_LPJ_G0022555.1 mouse_genomes_project 16 17783745 17785620 - Clcn2 protein_coding retained_intron MGP_LPJ_T0043626.1 MGP_LPJ_G0022555.1 mouse_genomes_project 16 17785965 17787323 - Clcn2 protein_coding retained_intron MGP_LPJ_T0017477.1 MGP_LPJ_G0015249.1 mouse_genomes_project 16 97016854 97019508 + Gm15342 processed_transcript processed_transcript MGP_LPJ_T0003682.1 MGP_LPJ_G0003334.1 mouse_genomes_project 16 31931612 31932686 + Gm15829 antisense antisense MGP_LPJ_T0043356.1 MGP_LPJ_G0022498.1 mouse_genomes_project 16 14896903 14899912 - MGP_LPJ_P0043356 Slc25a1 protein_coding protein_coding MGP_LPJ_T0043357.1 MGP_LPJ_G0022498.1 mouse_genomes_project 16 14897374 14899036 - Slc25a1 protein_coding retained_intron MGP_LPJ_T0043358.1 MGP_LPJ_G0022498.1 mouse_genomes_project 16 14897408 14899109 - MGP_LPJ_P0043358 Slc25a1 protein_coding protein_coding MGP_LPJ_T0043359.1 MGP_LPJ_G0022498.1 mouse_genomes_project 16 14897958 14899580 - Slc25a1 protein_coding retained_intron MGP_LPJ_T0043360.1 MGP_LPJ_G0022498.1 mouse_genomes_project 16 14898842 14899822 - Slc25a1 protein_coding retained_intron MGP_LPJ_T0043361.1 MGP_LPJ_G0022498.1 mouse_genomes_project 16 14899109 14899902 - Slc25a1 protein_coding retained_intron MGP_LPJ_T0043219.1 MGP_LPJ_G0022471.1 mouse_genomes_project 16 14039726 14046387 + MGP_LPJ_P0043219 Ydjc protein_coding protein_coding MGP_LPJ_T0043220.1 MGP_LPJ_G0022471.1 mouse_genomes_project 16 14040948 14043952 + Ydjc protein_coding retained_intron MGP_LPJ_T0043221.1 MGP_LPJ_G0022471.1 mouse_genomes_project 16 14042042 14055829 + MGP_LPJ_P0043221 Ydjc protein_coding protein_coding MGP_LPJ_T0043222.1 MGP_LPJ_G0022471.1 mouse_genomes_project 16 14042054 14046803 + Ydjc protein_coding retained_intron MGP_LPJ_T0043223.1 MGP_LPJ_G0022471.1 mouse_genomes_project 16 14042081 14043952 + Ydjc protein_coding retained_intron MGP_LPJ_T0043224.1 MGP_LPJ_G0022471.1 mouse_genomes_project 16 14042084 14043952 + MGP_LPJ_P0043224 Ydjc protein_coding protein_coding MGP_LPJ_T0100434.1 MGP_LPJ_G0038697.1 mouse_genomes_project 16 42319023 42319156 - Gm25989 snoRNA snoRNA MGP_LPJ_T0000018.1 MGP_LPJ_G0000013.1 mouse_genomes_project 16 16220224 16220538 - MGP_LPJ_P0000018 Iglc4 IG_C_gene IG_C_gene MGP_LPJ_T0010159.1 MGP_LPJ_G0008277.1 mouse_genomes_project 16 49445200 49445314 + Mir6363 miRNA miRNA MGP_LPJ_T0043489.1 MGP_LPJ_G0022530.1 mouse_genomes_project 16 16564850 16566432 - MGP_LPJ_P0043489 protein_coding protein_coding MGP_LPJ_T0045227.1 MGP_LPJ_G0023000.1 mouse_genomes_project 16 99052583 99067777 - MGP_LPJ_P0045227 Zbtb21 protein_coding protein_coding MGP_LPJ_T0045228.1 MGP_LPJ_G0023000.1 mouse_genomes_project 16 99052583 99067777 - MGP_LPJ_P0045228 Zbtb21 protein_coding protein_coding MGP_LPJ_T0045229.1 MGP_LPJ_G0023000.1 mouse_genomes_project 16 99052583 99067777 - MGP_LPJ_P0045229 Zbtb21 protein_coding protein_coding MGP_LPJ_T0044264.1 MGP_LPJ_G0022723.1 mouse_genomes_project 16 36991771 37022455 - MGP_LPJ_P0044264 Upk1b protein_coding protein_coding MGP_LPJ_T0098002.1 MGP_LPJ_G0036283.1 mouse_genomes_project 16 89473100 89473336 - pseudogene pseudogene MGP_LPJ_T0099152.1 MGP_LPJ_G0037415.1 mouse_genomes_project 16 1583602 1583710 - Gm23483 snRNA snRNA MGP_LPJ_T0043764.1 MGP_LPJ_G0022597.1 mouse_genomes_project 16 24021246 24046119 - MGP_LPJ_P0043764 Tmem207 protein_coding protein_coding MGP_LPJ_T0043286.1 MGP_LPJ_G0022483.1 mouse_genomes_project 16 14463668 14480437 - MGP_LPJ_P0043286 Lrrc74b protein_coding protein_coding MGP_LPJ_T0043287.1 MGP_LPJ_G0022483.1 mouse_genomes_project 16 14463668 14480437 - MGP_LPJ_P0043287 Lrrc74b protein_coding protein_coding MGP_LPJ_T0043288.1 MGP_LPJ_G0022483.1 mouse_genomes_project 16 14464633 14473620 - Lrrc74b protein_coding processed_transcript MGP_LPJ_T0043289.1 MGP_LPJ_G0022483.1 mouse_genomes_project 16 14467998 14480434 - MGP_LPJ_P0043289 Lrrc74b protein_coding protein_coding MGP_LPJ_T0044607.1 MGP_LPJ_G0022811.1 mouse_genomes_project 16 57897572 57899330 - MGP_LPJ_P0044607 Olfr177 protein_coding protein_coding MGP_LPJ_T0044608.1 MGP_LPJ_G0022811.1 mouse_genomes_project 16 57897572 57898502 - MGP_LPJ_P0044608 Olfr177 protein_coding protein_coding MGP_LPJ_T0013162.1 MGP_LPJ_G0011253.1 mouse_genomes_project 16 37036185 37036579 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100433.1 MGP_LPJ_G0038696.1 mouse_genomes_project 16 42263127 42263256 - Gm26074 snoRNA snoRNA MGP_LPJ_T0010160.1 MGP_LPJ_G0008278.1 mouse_genomes_project 16 52708547 52708612 + Gm25041 miRNA miRNA MGP_LPJ_T0043213.1 MGP_LPJ_G0022469.1 mouse_genomes_project 16 14023592 14025842 - MGP_LPJ_P0043213 Sdf2l1 protein_coding protein_coding MGP_LPJ_T0043367.1 MGP_LPJ_G0022502.1 mouse_genomes_project 16 15043401 15073791 - MGP_LPJ_P0043367 Prodh protein_coding protein_coding MGP_LPJ_T0043373.1 MGP_LPJ_G0022502.1 mouse_genomes_project 16 15056389 15073785 - MGP_LPJ_P0043373 Prodh protein_coding protein_coding MGP_LPJ_T0043374.1 MGP_LPJ_G0022502.1 mouse_genomes_project 16 15056793 15063896 - MGP_LPJ_P0043374 Prodh protein_coding nonsense_mediated_decay MGP_LPJ_T0043375.1 MGP_LPJ_G0022502.1 mouse_genomes_project 16 15056923 15064570 - MGP_LPJ_P0043375 Prodh protein_coding protein_coding MGP_LPJ_T0043376.1 MGP_LPJ_G0022502.1 mouse_genomes_project 16 15065639 15066947 - Prodh protein_coding processed_transcript MGP_LPJ_T0043377.1 MGP_LPJ_G0022502.1 mouse_genomes_project 16 15068831 15073650 - MGP_LPJ_P0043377 Prodh protein_coding protein_coding MGP_LPJ_T0044457.1 MGP_LPJ_G0022765.1 mouse_genomes_project 16 46887772 46898173 + MGP_LPJ_P0044457 Dppa4 protein_coding protein_coding MGP_LPJ_T0044458.1 MGP_LPJ_G0022765.1 mouse_genomes_project 16 46887772 46898173 + MGP_LPJ_P0044458 Dppa4 protein_coding protein_coding MGP_LPJ_T0010143.1 MGP_LPJ_G0008261.1 mouse_genomes_project 16 19867656 19867763 + Mir6362 miRNA miRNA MGP_LPJ_T0044369.1 MGP_LPJ_G0022744.1 mouse_genomes_project 16 43260547 43301108 + MGP_LPJ_P0044369 Cd200r1 protein_coding protein_coding MGP_LPJ_T0044370.1 MGP_LPJ_G0022744.1 mouse_genomes_project 16 43260637 43300474 + MGP_LPJ_P0044370 Cd200r1 protein_coding nonsense_mediated_decay MGP_LPJ_T0099176.1 MGP_LPJ_G0037439.1 mouse_genomes_project 16 34347793 34347898 - Gm24801 snRNA snRNA MGP_LPJ_T0000987.1 MGP_LPJ_G0000914.1 mouse_genomes_project 16 38358532 38358575 + TEC TEC MGP_LPJ_T0010142.1 MGP_LPJ_G0008260.1 mouse_genomes_project 16 19793561 19793690 - Mir8095 miRNA miRNA MGP_LPJ_T0044665.1 MGP_LPJ_G0022839.1 mouse_genomes_project 16 62046529 62102935 - MGP_LPJ_P0044665 Arl13b protein_coding protein_coding MGP_LPJ_T0044666.1 MGP_LPJ_G0022839.1 mouse_genomes_project 16 62048197 62056690 - Arl13b protein_coding processed_transcript MGP_LPJ_T0044668.1 MGP_LPJ_G0022839.1 mouse_genomes_project 16 62082113 62102935 - Arl13b protein_coding retained_intron MGP_LPJ_T0100423.1 MGP_LPJ_G0038686.1 mouse_genomes_project 16 22326695 22326829 + Gm22672 snoRNA snoRNA MGP_LPJ_T0044736.1 MGP_LPJ_G0022865.1 mouse_genomes_project 16 78253649 78272768 - MGP_LPJ_P0044736 protein_coding protein_coding MGP_LPJ_T0044463.1 MGP_LPJ_G0022770.1 mouse_genomes_project 16 47473712 47475622 + MGP_LPJ_P0044463 Retnla protein_coding protein_coding MGP_LPJ_T0044672.1 MGP_LPJ_G0022842.1 mouse_genomes_project 16 62793359 63143291 - MGP_LPJ_P0044672 Epha3 protein_coding protein_coding MGP_LPJ_T0010127.1 MGP_LPJ_G0008245.1 mouse_genomes_project 16 10364615 10364716 - Mir6365 miRNA miRNA MGP_LPJ_T0043485.1 MGP_LPJ_G0022527.1 mouse_genomes_project 16 16431049 16431991 - MGP_LPJ_P0043485 Olfr165 protein_coding protein_coding MGP_LPJ_T0013188.1 MGP_LPJ_G0011279.1 mouse_genomes_project 16 87955335 87955725 - processed_pseudogene processed_pseudogene MGP_LPJ_T0044279.1 MGP_LPJ_G0022727.1 mouse_genomes_project 16 40615051 40712679 - MGP_LPJ_P0044279 Gap43 protein_coding protein_coding MGP_LPJ_T0044280.1 MGP_LPJ_G0022727.1 mouse_genomes_project 16 40615067 40644142 - Gap43 protein_coding processed_transcript MGP_LPJ_T0044741.1 MGP_LPJ_G0022868.1 mouse_genomes_project 16 78809737 78837515 + MGP_LPJ_P0044741 Chodl protein_coding protein_coding MGP_LPJ_T0044742.1 MGP_LPJ_G0022868.1 mouse_genomes_project 16 78809737 78832982 + MGP_LPJ_P0044742 Chodl protein_coding protein_coding MGP_LPJ_T0044743.1 MGP_LPJ_G0022868.1 mouse_genomes_project 16 78809737 78835685 + MGP_LPJ_P0044743 Chodl protein_coding protein_coding MGP_LPJ_T0013183.1 MGP_LPJ_G0011274.1 mouse_genomes_project 16 75560000 75560430 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010157.1 MGP_LPJ_G0008275.1 mouse_genomes_project 16 42452186 42452312 + Mir3470b miRNA miRNA MGP_LPJ_T0044357.1 MGP_LPJ_G0022741.1 mouse_genomes_project 16 42960350 43035755 - MGP_LPJ_P0044357 Boc protein_coding protein_coding MGP_LPJ_T0044358.1 MGP_LPJ_G0022741.1 mouse_genomes_project 16 42960354 43035782 - MGP_LPJ_P0044358 Boc protein_coding protein_coding MGP_LPJ_T0044359.1 MGP_LPJ_G0022741.1 mouse_genomes_project 16 42960357 43035638 - MGP_LPJ_P0044359 Boc protein_coding unknown_likely_coding MGP_LPJ_T0044874.1 MGP_LPJ_G0022931.1 mouse_genomes_project 16 91369883 91377983 - Mis18a protein_coding retained_intron MGP_LPJ_T0044875.1 MGP_LPJ_G0022931.1 mouse_genomes_project 16 91369883 91377983 - MGP_LPJ_P0044875 Mis18a protein_coding protein_coding MGP_LPJ_T0044876.1 MGP_LPJ_G0022931.1 mouse_genomes_project 16 91372025 91377718 - Mis18a protein_coding retained_intron MGP_LPJ_T0043364.1 MGP_LPJ_G0022501.1 mouse_genomes_project 16 15035905 15056028 + MGP_LPJ_P0043364 Dgcr6 protein_coding protein_coding MGP_LPJ_T0043365.1 MGP_LPJ_G0022501.1 mouse_genomes_project 16 15035921 15039605 + Dgcr6 protein_coding processed_transcript MGP_LPJ_T0043366.1 MGP_LPJ_G0022501.1 mouse_genomes_project 16 15035937 15050819 + Dgcr6 protein_coding processed_transcript MGP_LPJ_T0043368.1 MGP_LPJ_G0022501.1 mouse_genomes_project 16 15049469 15056010 + MGP_LPJ_P0043368 Dgcr6 protein_coding protein_coding MGP_LPJ_T0043369.1 MGP_LPJ_G0022501.1 mouse_genomes_project 16 15050703 15056305 + MGP_LPJ_P0043369 Dgcr6 protein_coding protein_coding MGP_LPJ_T0043370.1 MGP_LPJ_G0022501.1 mouse_genomes_project 16 15050753 15056026 + MGP_LPJ_P0043370 Dgcr6 protein_coding protein_coding MGP_LPJ_T0043371.1 MGP_LPJ_G0022501.1 mouse_genomes_project 16 15050758 15056300 + MGP_LPJ_P0043371 Dgcr6 protein_coding protein_coding MGP_LPJ_T0043372.1 MGP_LPJ_G0022501.1 mouse_genomes_project 16 15054147 15056011 + Dgcr6 protein_coding processed_transcript MGP_LPJ_T0099185.1 MGP_LPJ_G0037448.1 mouse_genomes_project 16 41526799 41526906 + Gm25873 snRNA snRNA MGP_LPJ_T0101909.1 MGP_LPJ_G0039946.1 mouse_genomes_project 16 57986920 57987491 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0045047.1 MGP_LPJ_G0022966.1 mouse_genomes_project 16 94553396 94561127 + MGP_LPJ_P0045047 Cbr3 protein_coding protein_coding MGP_LPJ_T0044365.1 MGP_LPJ_G0022743.1 mouse_genomes_project 16 43231457 43241003 - MGP_LPJ_P0044365 Gtpbp8 protein_coding protein_coding MGP_LPJ_T0044366.1 MGP_LPJ_G0022743.1 mouse_genomes_project 16 43233831 43240999 - MGP_LPJ_P0044366 Gtpbp8 protein_coding protein_coding MGP_LPJ_T0044367.1 MGP_LPJ_G0022743.1 mouse_genomes_project 16 43233954 43240923 - MGP_LPJ_P0044367 Gtpbp8 protein_coding protein_coding MGP_LPJ_T0044368.1 MGP_LPJ_G0022743.1 mouse_genomes_project 16 43238447 43240949 - MGP_LPJ_P0044368 Gtpbp8 protein_coding nonsense_mediated_decay MGP_LPJ_T0044316.1 MGP_LPJ_G0022733.1 mouse_genomes_project 16 42399964 42414474 - MGP_LPJ_P0044316 Zdhhc23 protein_coding unknown_likely_coding MGP_LPJ_T0044317.1 MGP_LPJ_G0022733.1 mouse_genomes_project 16 42404012 42414028 - MGP_LPJ_P0044317 Zdhhc23 protein_coding protein_coding MGP_LPJ_T0043688.1 MGP_LPJ_G0022576.1 mouse_genomes_project 16 20172155 20179546 + MGP_LPJ_P0043688 Ahsg protein_coding protein_coding MGP_LPJ_T0100412.1 MGP_LPJ_G0038675.1 mouse_genomes_project 16 5112932 5113014 - Gm23706 snoRNA snoRNA MGP_LPJ_T0043454.1 MGP_LPJ_G0022518.1 mouse_genomes_project 16 15785686 15787100 + MGP_LPJ_P0043454 Cldn5 protein_coding protein_coding MGP_LPJ_T0043627.1 MGP_LPJ_G0022556.1 mouse_genomes_project 16 17791523 17795918 + MGP_LPJ_P0043627 Polr2h protein_coding protein_coding MGP_LPJ_T0043628.1 MGP_LPJ_G0022556.1 mouse_genomes_project 16 17792030 17795658 + Polr2h protein_coding processed_transcript MGP_LPJ_T0006840.1 MGP_LPJ_G0005642.1 mouse_genomes_project 16 7986679 8004146 + 4930509G22Rik lincRNA lincRNA MGP_LPJ_T0043791.1 MGP_LPJ_G0022607.1 mouse_genomes_project 16 27041558 27102914 - MGP_LPJ_P0043791 Atp13a4 protein_coding nonsense_mediated_decay MGP_LPJ_T0043792.1 MGP_LPJ_G0022607.1 mouse_genomes_project 16 27041733 27189267 - MGP_LPJ_P0043792 Atp13a4 protein_coding protein_coding MGP_LPJ_T0043793.1 MGP_LPJ_G0022607.1 mouse_genomes_project 16 27041745 27189153 - MGP_LPJ_P0043793 Atp13a4 protein_coding protein_coding MGP_LPJ_T0043794.1 MGP_LPJ_G0022607.1 mouse_genomes_project 16 27041751 27056277 - Atp13a4 protein_coding processed_transcript MGP_LPJ_T0043795.1 MGP_LPJ_G0022607.1 mouse_genomes_project 16 27041791 27192477 - MGP_LPJ_P0043795 Atp13a4 protein_coding nonsense_mediated_decay MGP_LPJ_T0043796.1 MGP_LPJ_G0022607.1 mouse_genomes_project 16 27042117 27054275 - Atp13a4 protein_coding retained_intron MGP_LPJ_T0043797.1 MGP_LPJ_G0022607.1 mouse_genomes_project 16 27056619 27093042 - Atp13a4 protein_coding retained_intron MGP_LPJ_T0043798.1 MGP_LPJ_G0022607.1 mouse_genomes_project 16 27075500 27094085 - MGP_LPJ_P0043798 Atp13a4 protein_coding nonsense_mediated_decay MGP_LPJ_T0043799.1 MGP_LPJ_G0022607.1 mouse_genomes_project 16 27075509 27192477 - MGP_LPJ_P0043799 Atp13a4 protein_coding protein_coding MGP_LPJ_T0043800.1 MGP_LPJ_G0022607.1 mouse_genomes_project 16 27188093 27192411 - Atp13a4 protein_coding retained_intron MGP_LPJ_T0043801.1 MGP_LPJ_G0022607.1 mouse_genomes_project 16 27188146 27192472 - Atp13a4 protein_coding retained_intron MGP_LPJ_T0100443.1 MGP_LPJ_G0038706.1 mouse_genomes_project 16 57730953 57731082 - Gm26019 snoRNA snoRNA MGP_LPJ_T0013166.1 MGP_LPJ_G0011257.1 mouse_genomes_project 16 43314085 43314377 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010137.1 MGP_LPJ_G0008255.1 mouse_genomes_project 16 15354927 15354998 - Gm26219 miRNA miRNA MGP_LPJ_T0098192.1 MGP_LPJ_G0036473.1 mouse_genomes_project 16 85085689 85085787 + Gm25908 rRNA rRNA MGP_LPJ_T0043967.1 MGP_LPJ_G0022648.1 mouse_genomes_project 16 30687384 30693687 - MGP_LPJ_P0043967 Gm933 protein_coding protein_coding MGP_LPJ_T0043926.1 MGP_LPJ_G0022639.1 mouse_genomes_project 16 30238870 30246545 + MGP_LPJ_P0043926 Tm4sf19 protein_coding protein_coding MGP_LPJ_T0013186.1 MGP_LPJ_G0011277.1 mouse_genomes_project 16 78850118 78850477 + processed_pseudogene processed_pseudogene MGP_LPJ_T0011430.1 MGP_LPJ_G0009548.1 mouse_genomes_project 16 65319868 65320181 + Gm22217 misc_RNA misc_RNA MGP_LPJ_T0044824.1 MGP_LPJ_G0022900.1 mouse_genomes_project 16 89318773 89328043 + MGP_LPJ_P0044824 Krtap15 protein_coding protein_coding MGP_LPJ_T0044826.1 MGP_LPJ_G0022900.1 mouse_genomes_project 16 89327552 89328403 + MGP_LPJ_P0044826 Krtap15 protein_coding protein_coding MGP_LPJ_T0043639.1 MGP_LPJ_G0022561.1 mouse_genomes_project 16 18596289 18756986 + MGP_LPJ_P0043639 Vps8 protein_coding protein_coding MGP_LPJ_T0043640.1 MGP_LPJ_G0022561.1 mouse_genomes_project 16 18596289 18825476 + MGP_LPJ_P0043640 Vps8 protein_coding protein_coding MGP_LPJ_T0043641.1 MGP_LPJ_G0022561.1 mouse_genomes_project 16 18596289 18825476 + MGP_LPJ_P0043641 Vps8 protein_coding protein_coding MGP_LPJ_T0043642.1 MGP_LPJ_G0022561.1 mouse_genomes_project 16 18596340 18825476 + MGP_LPJ_P0043642 Vps8 protein_coding protein_coding MGP_LPJ_T0043643.1 MGP_LPJ_G0022561.1 mouse_genomes_project 16 18596367 18722104 + MGP_LPJ_P0043643 Vps8 protein_coding protein_coding MGP_LPJ_T0043644.1 MGP_LPJ_G0022561.1 mouse_genomes_project 16 18596372 18825468 + MGP_LPJ_P0043644 Vps8 protein_coding protein_coding MGP_LPJ_T0043645.1 MGP_LPJ_G0022561.1 mouse_genomes_project 16 18596443 18608145 + MGP_LPJ_P0043645 Vps8 protein_coding protein_coding MGP_LPJ_T0043646.1 MGP_LPJ_G0022561.1 mouse_genomes_project 16 18642793 18822368 + MGP_LPJ_P0043646 Vps8 protein_coding protein_coding MGP_LPJ_T0043647.1 MGP_LPJ_G0022561.1 mouse_genomes_project 16 18684319 18825471 + MGP_LPJ_P0043647 Vps8 protein_coding protein_coding MGP_LPJ_T0043648.1 MGP_LPJ_G0022561.1 mouse_genomes_project 16 18703166 18708866 + Vps8 protein_coding retained_intron MGP_LPJ_T0043649.1 MGP_LPJ_G0022561.1 mouse_genomes_project 16 18703236 18735738 + MGP_LPJ_P0043649 Vps8 protein_coding nonsense_mediated_decay MGP_LPJ_T0043650.1 MGP_LPJ_G0022561.1 mouse_genomes_project 16 18746102 18760465 + Vps8 protein_coding retained_intron MGP_LPJ_T0043651.1 MGP_LPJ_G0022561.1 mouse_genomes_project 16 18808084 18825212 + Vps8 protein_coding processed_transcript MGP_LPJ_T0043381.1 MGP_LPJ_G0022506.1 mouse_genomes_project 16 15230910 15239690 - MGP_LPJ_P0043381 Ranbp1 protein_coding protein_coding MGP_LPJ_T0043382.1 MGP_LPJ_G0022506.1 mouse_genomes_project 16 15236096 15239774 - Ranbp1 protein_coding retained_intron MGP_LPJ_T0043383.1 MGP_LPJ_G0022506.1 mouse_genomes_project 16 15236332 15239562 - Ranbp1 protein_coding processed_transcript MGP_LPJ_T0043420.1 MGP_LPJ_G0022511.1 mouse_genomes_project 16 15401399 15419673 - MGP_LPJ_P0043420 Comt protein_coding unknown_likely_coding MGP_LPJ_T0043421.1 MGP_LPJ_G0022511.1 mouse_genomes_project 16 15404325 15407057 - MGP_LPJ_P0043421 Comt protein_coding protein_coding MGP_LPJ_T0043592.1 MGP_LPJ_G0022553.1 mouse_genomes_project 16 17741749 17752218 + MGP_LPJ_P0043592 Eif4g1 protein_coding protein_coding MGP_LPJ_T0043593.1 MGP_LPJ_G0022553.1 mouse_genomes_project 16 17741751 17751748 + MGP_LPJ_P0043593 Eif4g1 protein_coding protein_coding MGP_LPJ_T0043594.1 MGP_LPJ_G0022553.1 mouse_genomes_project 16 17745545 17766542 + MGP_LPJ_P0043594 Eif4g1 protein_coding protein_coding MGP_LPJ_T0043595.1 MGP_LPJ_G0022553.1 mouse_genomes_project 16 17745568 17766541 + MGP_LPJ_P0043595 Eif4g1 protein_coding protein_coding MGP_LPJ_T0043596.1 MGP_LPJ_G0022553.1 mouse_genomes_project 16 17745571 17756645 + MGP_LPJ_P0043596 Eif4g1 protein_coding protein_coding MGP_LPJ_T0043597.1 MGP_LPJ_G0022553.1 mouse_genomes_project 16 17745571 17766539 + MGP_LPJ_P0043597 Eif4g1 protein_coding protein_coding MGP_LPJ_T0043598.1 MGP_LPJ_G0022553.1 mouse_genomes_project 16 17745577 17766541 + MGP_LPJ_P0043598 Eif4g1 protein_coding protein_coding MGP_LPJ_T0043599.1 MGP_LPJ_G0022553.1 mouse_genomes_project 16 17745592 17756651 + MGP_LPJ_P0043599 Eif4g1 protein_coding protein_coding MGP_LPJ_T0043600.1 MGP_LPJ_G0022553.1 mouse_genomes_project 16 17745593 17756651 + MGP_LPJ_P0043600 Eif4g1 protein_coding protein_coding MGP_LPJ_T0043601.1 MGP_LPJ_G0022553.1 mouse_genomes_project 16 17745645 17752094 + MGP_LPJ_P0043601 Eif4g1 protein_coding protein_coding MGP_LPJ_T0043602.1 MGP_LPJ_G0022553.1 mouse_genomes_project 16 17745645 17766542 + MGP_LPJ_P0043602 Eif4g1 protein_coding protein_coding MGP_LPJ_T0043603.1 MGP_LPJ_G0022553.1 mouse_genomes_project 16 17746117 17766542 + MGP_LPJ_P0043603 Eif4g1 protein_coding nonsense_mediated_decay MGP_LPJ_T0043604.1 MGP_LPJ_G0022553.1 mouse_genomes_project 16 17746220 17750621 + MGP_LPJ_P0043604 Eif4g1 protein_coding protein_coding MGP_LPJ_T0043605.1 MGP_LPJ_G0022553.1 mouse_genomes_project 16 17746242 17766541 + MGP_LPJ_P0043605 Eif4g1 protein_coding protein_coding MGP_LPJ_T0043606.1 MGP_LPJ_G0022553.1 mouse_genomes_project 16 17746261 17751486 + MGP_LPJ_P0043606 Eif4g1 protein_coding protein_coding MGP_LPJ_T0043607.1 MGP_LPJ_G0022553.1 mouse_genomes_project 16 17746339 17766539 + MGP_LPJ_P0043607 Eif4g1 protein_coding protein_coding MGP_LPJ_T0043608.1 MGP_LPJ_G0022553.1 mouse_genomes_project 16 17746636 17751482 + MGP_LPJ_P0043608 Eif4g1 protein_coding protein_coding MGP_LPJ_T0043609.1 MGP_LPJ_G0022553.1 mouse_genomes_project 16 17746933 17751497 + MGP_LPJ_P0043609 Eif4g1 protein_coding protein_coding MGP_LPJ_T0043610.1 MGP_LPJ_G0022553.1 mouse_genomes_project 16 17751098 17766539 + Eif4g1 protein_coding retained_intron MGP_LPJ_T0043611.1 MGP_LPJ_G0022553.1 mouse_genomes_project 16 17751228 17752408 + Eif4g1 protein_coding processed_transcript MGP_LPJ_T0043612.1 MGP_LPJ_G0022553.1 mouse_genomes_project 16 17753847 17754542 + Eif4g1 protein_coding retained_intron MGP_LPJ_T0043613.1 MGP_LPJ_G0022553.1 mouse_genomes_project 16 17762643 17763330 + Eif4g1 protein_coding retained_intron MGP_LPJ_T0010165.1 MGP_LPJ_G0008283.1 mouse_genomes_project 16 62062202 62062270 + Gm25986 miRNA miRNA MGP_LPJ_T0042991.1 MGP_LPJ_G0022422.1 mouse_genomes_project 16 7944506 7984898 - MGP_LPJ_P0042991 Zc3h7a protein_coding protein_coding MGP_LPJ_T0042992.1 MGP_LPJ_G0022422.1 mouse_genomes_project 16 7945040 7948802 - Zc3h7a protein_coding retained_intron MGP_LPJ_T0042993.1 MGP_LPJ_G0022422.1 mouse_genomes_project 16 7946957 7949818 - Zc3h7a protein_coding retained_intron MGP_LPJ_T0042994.1 MGP_LPJ_G0022422.1 mouse_genomes_project 16 7948625 7956098 - MGP_LPJ_P0042994 Zc3h7a protein_coding nonsense_mediated_decay MGP_LPJ_T0042995.1 MGP_LPJ_G0022422.1 mouse_genomes_project 16 7948719 7984846 - MGP_LPJ_P0042995 Zc3h7a protein_coding nonsense_mediated_decay MGP_LPJ_T0042996.1 MGP_LPJ_G0022422.1 mouse_genomes_project 16 7952797 7984605 - MGP_LPJ_P0042996 Zc3h7a protein_coding protein_coding MGP_LPJ_T0042997.1 MGP_LPJ_G0022422.1 mouse_genomes_project 16 7952983 7954948 - Zc3h7a protein_coding retained_intron MGP_LPJ_T0042998.1 MGP_LPJ_G0022422.1 mouse_genomes_project 16 7954949 7959021 - Zc3h7a protein_coding retained_intron MGP_LPJ_T0042999.1 MGP_LPJ_G0022422.1 mouse_genomes_project 16 7956100 7983482 - MGP_LPJ_P0042999 Zc3h7a protein_coding protein_coding MGP_LPJ_T0043000.1 MGP_LPJ_G0022422.1 mouse_genomes_project 16 7957894 7958825 - Zc3h7a protein_coding retained_intron MGP_LPJ_T0043001.1 MGP_LPJ_G0022422.1 mouse_genomes_project 16 7958886 7960338 - Zc3h7a protein_coding retained_intron MGP_LPJ_T0043002.1 MGP_LPJ_G0022422.1 mouse_genomes_project 16 7959279 7964641 - Zc3h7a protein_coding retained_intron MGP_LPJ_T0043003.1 MGP_LPJ_G0022422.1 mouse_genomes_project 16 7960604 7966909 - Zc3h7a protein_coding retained_intron MGP_LPJ_T0043004.1 MGP_LPJ_G0022422.1 mouse_genomes_project 16 7961773 7966931 - Zc3h7a protein_coding retained_intron MGP_LPJ_T0043005.1 MGP_LPJ_G0022422.1 mouse_genomes_project 16 7965092 7983449 - MGP_LPJ_P0043005 Zc3h7a protein_coding protein_coding MGP_LPJ_T0043006.1 MGP_LPJ_G0022422.1 mouse_genomes_project 16 7969227 7984070 - MGP_LPJ_P0043006 Zc3h7a protein_coding protein_coding MGP_LPJ_T0043007.1 MGP_LPJ_G0022422.1 mouse_genomes_project 16 7969237 7984569 - MGP_LPJ_P0043007 Zc3h7a protein_coding protein_coding MGP_LPJ_T0043008.1 MGP_LPJ_G0022422.1 mouse_genomes_project 16 7971650 7984847 - Zc3h7a protein_coding retained_intron MGP_LPJ_T0006842.1 MGP_LPJ_G0005644.1 mouse_genomes_project 16 9682491 9720243 + 1700003L19Rik lincRNA lincRNA MGP_LPJ_T0000984.1 MGP_LPJ_G0000911.1 mouse_genomes_project 16 16258185 16261655 + TEC TEC MGP_LPJ_T0044226.1 MGP_LPJ_G0022714.1 mouse_genomes_project 16 36569300 36585763 + MGP_LPJ_P0044226 Popdc2 protein_coding protein_coding MGP_LPJ_T0044227.1 MGP_LPJ_G0022714.1 mouse_genomes_project 16 36569336 36585763 + MGP_LPJ_P0044227 Popdc2 protein_coding protein_coding MGP_LPJ_T0044228.1 MGP_LPJ_G0022714.1 mouse_genomes_project 16 36576119 36581693 + Popdc2 protein_coding processed_transcript MGP_LPJ_T0044229.1 MGP_LPJ_G0022714.1 mouse_genomes_project 16 36576726 36585310 + Popdc2 protein_coding processed_transcript MGP_LPJ_T0044230.1 MGP_LPJ_G0022714.1 mouse_genomes_project 16 36579471 36581636 + Popdc2 protein_coding processed_transcript MGP_LPJ_T0006854.1 MGP_LPJ_G0005653.1 mouse_genomes_project 16 21820147 21822124 - Lppos lincRNA lincRNA MGP_LPJ_T0044056.1 MGP_LPJ_G0022664.1 mouse_genomes_project 16 32629178 32661203 + MGP_LPJ_P0044056 Ropn1 protein_coding protein_coding MGP_LPJ_T0044057.1 MGP_LPJ_G0022664.1 mouse_genomes_project 16 32630445 32662620 + MGP_LPJ_P0044057 Ropn1 protein_coding protein_coding MGP_LPJ_T0044841.1 MGP_LPJ_G0022915.1 mouse_genomes_project 16 89628747 89629267 + MGP_LPJ_P0044841 Krtap6-3 protein_coding protein_coding MGP_LPJ_T0044842.1 MGP_LPJ_G0022915.1 mouse_genomes_project 16 89628823 89629267 + MGP_LPJ_P0044842 Krtap6-3 protein_coding protein_coding MGP_LPJ_T0006890.1 MGP_LPJ_G0005680.1 mouse_genomes_project 16 91188659 91189379 + 1110008E08Rik lincRNA lincRNA MGP_LPJ_T0006891.1 MGP_LPJ_G0005680.1 mouse_genomes_project 16 91188659 91189381 + 1110008E08Rik lincRNA lincRNA MGP_LPJ_T0045213.1 MGP_LPJ_G0022996.1 mouse_genomes_project 16 98654873 98704482 - MGP_LPJ_P0045213 Tmprss2 protein_coding protein_coding MGP_LPJ_T0099167.1 MGP_LPJ_G0037430.1 mouse_genomes_project 16 20796917 20796988 + Gm23066 snRNA snRNA MGP_LPJ_T0098705.1 MGP_LPJ_G0036970.1 mouse_genomes_project 16 93259303 93279085 + 2410124H12Rik sense_overlapping sense_overlapping MGP_LPJ_T0099201.1 MGP_LPJ_G0037464.1 mouse_genomes_project 16 89988341 89988446 - Gm23655 snRNA snRNA MGP_LPJ_T0042975.1 MGP_LPJ_G0022418.1 mouse_genomes_project 16 7615518 7623500 + MGP_LPJ_P0042975 Rmi2 protein_coding protein_coding MGP_LPJ_T0042976.1 MGP_LPJ_G0022418.1 mouse_genomes_project 16 7615527 7682009 + MGP_LPJ_P0042976 Rmi2 protein_coding nonsense_mediated_decay MGP_LPJ_T0043693.1 MGP_LPJ_G0022578.1 mouse_genomes_project 16 20243486 20255264 + MGP_LPJ_P0043693 Hrg protein_coding protein_coding MGP_LPJ_T0043473.1 MGP_LPJ_G0022523.1 mouse_genomes_project 16 15890506 15895312 - MGP_LPJ_P0043473 Mrpl40 protein_coding protein_coding MGP_LPJ_T0043474.1 MGP_LPJ_G0022523.1 mouse_genomes_project 16 15890714 15895084 - MGP_LPJ_P0043474 Mrpl40 protein_coding protein_coding MGP_LPJ_T0044813.1 MGP_LPJ_G0022889.1 mouse_genomes_project 16 89103653 89105225 - MGP_LPJ_P0044813 Krtap24-1 protein_coding protein_coding MGP_LPJ_T0013135.1 MGP_LPJ_G0011226.1 mouse_genomes_project 16 16036022 16036670 - processed_pseudogene processed_pseudogene MGP_LPJ_T0044806.1 MGP_LPJ_G0022886.1 mouse_genomes_project 16 88330504 88496034 - MGP_LPJ_P0044806 Grik1 protein_coding protein_coding MGP_LPJ_T0044807.1 MGP_LPJ_G0022886.1 mouse_genomes_project 16 88330504 88523773 - MGP_LPJ_P0044807 Grik1 protein_coding unknown_likely_coding MGP_LPJ_T0044808.1 MGP_LPJ_G0022886.1 mouse_genomes_project 16 88330504 88496034 - MGP_LPJ_P0044808 Grik1 protein_coding protein_coding MGP_LPJ_T0044809.1 MGP_LPJ_G0022886.1 mouse_genomes_project 16 88330504 88496650 - MGP_LPJ_P0044809 Grik1 protein_coding unknown_likely_coding MGP_LPJ_T0044810.1 MGP_LPJ_G0022886.1 mouse_genomes_project 16 88347908 88496034 - MGP_LPJ_P0044810 Grik1 protein_coding protein_coding MGP_LPJ_T0000019.1 MGP_LPJ_G0000014.1 mouse_genomes_project 16 16223621 16224079 - MGP_LPJ_P0000019 Iglc2 IG_C_gene IG_C_gene MGP_LPJ_T0000020.1 MGP_LPJ_G0000014.1 mouse_genomes_project 16 16223626 16225577 - MGP_LPJ_P0000020 Iglc2 IG_C_gene IG_C_gene MGP_LPJ_T0006835.1 MGP_LPJ_G0005637.1 mouse_genomes_project 16 314988 337397 + Gm26675 lincRNA lincRNA MGP_LPJ_T0003694.1 MGP_LPJ_G0003344.1 mouse_genomes_project 16 44495170 44498127 + Gm15640 antisense antisense MGP_LPJ_T0017462.1 MGP_LPJ_G0015241.1 mouse_genomes_project 16 87901690 87910763 + B130034C11Rik processed_transcript retained_intron MGP_LPJ_T0017463.1 MGP_LPJ_G0015241.1 mouse_genomes_project 16 87901764 87910968 + B130034C11Rik processed_transcript processed_transcript MGP_LPJ_T0043490.1 MGP_LPJ_G0022531.1 mouse_genomes_project 16 16657369 16685202 - MGP_LPJ_P0043490 protein_coding protein_coding MGP_LPJ_T0098185.1 MGP_LPJ_G0036466.1 mouse_genomes_project 16 12910842 12910952 - n-R5s31 rRNA rRNA MGP_LPJ_T0010149.1 MGP_LPJ_G0008267.1 mouse_genomes_project 16 30976702 30976775 + Gm22231 miRNA miRNA MGP_LPJ_T0042876.1 MGP_LPJ_G0022389.1 mouse_genomes_project 16 1739740 1750211 - MGP_LPJ_P0042876 AU021092 protein_coding protein_coding MGP_LPJ_T0044030.1 MGP_LPJ_G0022661.1 mouse_genomes_project 16 31788784 31914581 + MGP_LPJ_P0044030 Itgb5 protein_coding protein_coding MGP_LPJ_T0044031.1 MGP_LPJ_G0022661.1 mouse_genomes_project 16 31788796 31914588 + MGP_LPJ_P0044031 Itgb5 protein_coding protein_coding MGP_LPJ_T0044032.1 MGP_LPJ_G0022661.1 mouse_genomes_project 16 31847036 31874628 + Itgb5 protein_coding processed_transcript MGP_LPJ_T0044033.1 MGP_LPJ_G0022661.1 mouse_genomes_project 16 31853943 31862131 + Itgb5 protein_coding processed_transcript MGP_LPJ_T0044847.1 MGP_LPJ_G0022919.1 mouse_genomes_project 16 89707582 89707729 + MGP_LPJ_P0044847 Gm7735 protein_coding protein_coding MGP_LPJ_T0043841.1 MGP_LPJ_G0022618.1 mouse_genomes_project 16 28702606 28832926 - MGP_LPJ_P0043841 Xxylt1 protein_coding protein_coding MGP_LPJ_T0043842.1 MGP_LPJ_G0022618.1 mouse_genomes_project 16 28704440 28813140 - Xxylt1 protein_coding processed_transcript MGP_LPJ_T0043843.1 MGP_LPJ_G0022618.1 mouse_genomes_project 16 28759292 28821506 - Xxylt1 protein_coding processed_transcript MGP_LPJ_T0043844.1 MGP_LPJ_G0022618.1 mouse_genomes_project 16 28759334 28819533 - Xxylt1 protein_coding processed_transcript MGP_LPJ_T0011426.1 MGP_LPJ_G0009544.1 mouse_genomes_project 16 39358209 39358360 - Gm27717 misc_RNA misc_RNA MGP_LPJ_T0043115.1 MGP_LPJ_G0022448.1 mouse_genomes_project 16 11529266 11589212 + MGP_LPJ_P0043115 A630010A05Rik protein_coding protein_coding MGP_LPJ_T0043116.1 MGP_LPJ_G0022448.1 mouse_genomes_project 16 11547230 11589234 + MGP_LPJ_P0043116 A630010A05Rik protein_coding protein_coding MGP_LPJ_T0043117.1 MGP_LPJ_G0022448.1 mouse_genomes_project 16 11552595 11589220 + MGP_LPJ_P0043117 A630010A05Rik protein_coding protein_coding MGP_LPJ_T0043925.1 MGP_LPJ_G0022638.1 mouse_genomes_project 16 30168034 30231940 + MGP_LPJ_P0043925 Ubxn7 protein_coding protein_coding MGP_LPJ_T0010182.1 MGP_LPJ_G0008300.1 mouse_genomes_project 16 98982232 98982291 - Mir6964 miRNA miRNA MGP_LPJ_T0013138.1 MGP_LPJ_G0011229.1 mouse_genomes_project 16 16704568 16705075 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001005.1 MGP_LPJ_G0000931.1 mouse_genomes_project 16 77525064 77525972 + TEC TEC MGP_LPJ_T0044832.1 MGP_LPJ_G0022906.1 mouse_genomes_project 16 89437202 89437370 - MGP_LPJ_P0044832 Krtap19-9a protein_coding protein_coding MGP_LPJ_T0043906.1 MGP_LPJ_G0022632.1 mouse_genomes_project 16 29971736 29994423 - MGP_LPJ_P0043906 Nrros protein_coding protein_coding MGP_LPJ_T0043907.1 MGP_LPJ_G0022632.1 mouse_genomes_project 16 29971746 29994395 - MGP_LPJ_P0043907 Nrros protein_coding protein_coding MGP_LPJ_T0043908.1 MGP_LPJ_G0022632.1 mouse_genomes_project 16 29971746 29976902 - MGP_LPJ_P0043908 Nrros protein_coding protein_coding MGP_LPJ_T0043909.1 MGP_LPJ_G0022632.1 mouse_genomes_project 16 29971776 29994314 - MGP_LPJ_P0043909 Nrros protein_coding protein_coding MGP_LPJ_T0043910.1 MGP_LPJ_G0022632.1 mouse_genomes_project 16 29971776 29994332 - MGP_LPJ_P0043910 Nrros protein_coding protein_coding MGP_LPJ_T0043911.1 MGP_LPJ_G0022632.1 mouse_genomes_project 16 29973633 29994432 - MGP_LPJ_P0043911 Nrros protein_coding protein_coding MGP_LPJ_T0043912.1 MGP_LPJ_G0022632.1 mouse_genomes_project 16 29973766 29994314 - Nrros protein_coding processed_transcript MGP_LPJ_T0043913.1 MGP_LPJ_G0022632.1 mouse_genomes_project 16 29973778 29977095 - Nrros protein_coding processed_transcript MGP_LPJ_T0043914.1 MGP_LPJ_G0022632.1 mouse_genomes_project 16 29973825 29994320 - MGP_LPJ_P0043914 Nrros protein_coding protein_coding MGP_LPJ_T0044414.1 MGP_LPJ_G0022753.1 mouse_genomes_project 16 43938264 43990534 - Gm609 protein_coding processed_transcript MGP_LPJ_T0044415.1 MGP_LPJ_G0022753.1 mouse_genomes_project 16 43944396 44021327 - MGP_LPJ_P0044415 Gm609 protein_coding protein_coding MGP_LPJ_T0042974.1 MGP_LPJ_G0022417.1 mouse_genomes_project 16 7592860 7592940 + MGP_LPJ_P0042974 Gm11172 protein_coding protein_coding MGP_LPJ_T0099174.1 MGP_LPJ_G0037437.1 mouse_genomes_project 16 34258969 34259076 - Gm22885 snRNA snRNA MGP_LPJ_T0044783.1 MGP_LPJ_G0022882.1 mouse_genomes_project 16 87859288 87867930 + MGP_LPJ_P0044783 Usp16 protein_coding protein_coding MGP_LPJ_T0044784.1 MGP_LPJ_G0022882.1 mouse_genomes_project 16 87859330 87867447 + Usp16 protein_coding retained_intron MGP_LPJ_T0044785.1 MGP_LPJ_G0022882.1 mouse_genomes_project 16 87859346 87876905 + Usp16 protein_coding retained_intron MGP_LPJ_T0044786.1 MGP_LPJ_G0022882.1 mouse_genomes_project 16 87859352 87872228 + Usp16 protein_coding processed_transcript MGP_LPJ_T0044787.1 MGP_LPJ_G0022882.1 mouse_genomes_project 16 87859361 87889189 + MGP_LPJ_P0044787 Usp16 protein_coding nonsense_mediated_decay MGP_LPJ_T0044788.1 MGP_LPJ_G0022882.1 mouse_genomes_project 16 87859389 87889196 + MGP_LPJ_P0044788 Usp16 protein_coding protein_coding MGP_LPJ_T0044789.1 MGP_LPJ_G0022882.1 mouse_genomes_project 16 87878734 87885792 + Usp16 protein_coding retained_intron MGP_LPJ_T0044790.1 MGP_LPJ_G0022882.1 mouse_genomes_project 16 87878969 87885086 + Usp16 protein_coding retained_intron MGP_LPJ_T0044791.1 MGP_LPJ_G0022882.1 mouse_genomes_project 16 87887316 87889059 + Usp16 protein_coding retained_intron MGP_LPJ_T0044792.1 MGP_LPJ_G0022882.1 mouse_genomes_project 16 87888729 87889177 + Usp16 protein_coding retained_intron MGP_LPJ_T0000044.1 MGP_LPJ_G0000036.1 mouse_genomes_project 16 16087940 16087978 - MGP_LPJ_P0000044 Iglj3 IG_J_gene IG_J_gene MGP_LPJ_T0044679.1 MGP_LPJ_G0022848.1 mouse_genomes_project 16 64841785 64855442 + MGP_LPJ_P0044679 Pou1f1 protein_coding protein_coding MGP_LPJ_T0044680.1 MGP_LPJ_G0022848.1 mouse_genomes_project 16 64841786 64846764 + Pou1f1 protein_coding retained_intron MGP_LPJ_T0044681.1 MGP_LPJ_G0022848.1 mouse_genomes_project 16 64841786 64856557 + MGP_LPJ_P0044681 Pou1f1 protein_coding protein_coding MGP_LPJ_T0044682.1 MGP_LPJ_G0022848.1 mouse_genomes_project 16 64841822 64855322 + MGP_LPJ_P0044682 Pou1f1 protein_coding protein_coding MGP_LPJ_T0044683.1 MGP_LPJ_G0022848.1 mouse_genomes_project 16 64844497 64855183 + MGP_LPJ_P0044683 Pou1f1 protein_coding protein_coding MGP_LPJ_T0003658.1 MGP_LPJ_G0003314.1 mouse_genomes_project 16 1237352 1238293 + Gm15859 antisense antisense MGP_LPJ_T0044630.1 MGP_LPJ_G0022823.1 mouse_genomes_project 16 58211530 58212525 + MGP_LPJ_P0044630 Olfr195 protein_coding protein_coding MGP_LPJ_T0045028.1 MGP_LPJ_G0022961.1 mouse_genomes_project 16 93168268 93243698 - MGP_LPJ_P0045028 Rcan1 protein_coding protein_coding MGP_LPJ_T0045029.1 MGP_LPJ_G0022961.1 mouse_genomes_project 16 93168268 93176397 - MGP_LPJ_P0045029 Rcan1 protein_coding protein_coding MGP_LPJ_T0000982.1 MGP_LPJ_G0000909.1 mouse_genomes_project 16 641604 645756 - TEC TEC MGP_LPJ_T0043342.1 MGP_LPJ_G0022491.1 mouse_genomes_project 16 14793721 14796810 - MGP_LPJ_P0043342 Car15 protein_coding protein_coding MGP_LPJ_T0043761.1 MGP_LPJ_G0022595.1 mouse_genomes_project 16 23857844 23873858 - MGP_LPJ_P0043761 Cldn1 protein_coding protein_coding MGP_LPJ_T0100415.1 MGP_LPJ_G0038678.1 mouse_genomes_project 16 16330554 16330680 + Gm22158 snoRNA snoRNA MGP_LPJ_T0043183.1 MGP_LPJ_G0022464.1 mouse_genomes_project 16 13779148 13810471 + MGP_LPJ_P0043183 Ppm1f protein_coding protein_coding MGP_LPJ_T0043184.1 MGP_LPJ_G0022464.1 mouse_genomes_project 16 13779253 13798306 + Ppm1f protein_coding processed_transcript MGP_LPJ_T0003666.1 MGP_LPJ_G0003321.1 mouse_genomes_project 16 13984788 13988324 + Gm15585 antisense antisense MGP_LPJ_T0013125.1 MGP_LPJ_G0011216.1 mouse_genomes_project 16 12142554 12143024 - processed_pseudogene processed_pseudogene MGP_LPJ_T0043816.1 MGP_LPJ_G0022612.1 mouse_genomes_project 16 27973030 27987028 - MGP_LPJ_P0043816 Lrrc15 protein_coding protein_coding MGP_LPJ_T0044202.1 MGP_LPJ_G0022705.1 mouse_genomes_project 16 35951994 36011902 + MGP_LPJ_P0044202 Fstl1 protein_coding protein_coding MGP_LPJ_T0044203.1 MGP_LPJ_G0022705.1 mouse_genomes_project 16 35952196 35970689 + Fstl1 protein_coding processed_transcript MGP_LPJ_T0044204.1 MGP_LPJ_G0022705.1 mouse_genomes_project 16 35952273 35994298 + Fstl1 protein_coding retained_intron MGP_LPJ_T0044205.1 MGP_LPJ_G0022705.1 mouse_genomes_project 16 35991061 36009816 + Fstl1 protein_coding processed_transcript MGP_LPJ_T0044206.1 MGP_LPJ_G0022705.1 mouse_genomes_project 16 35998092 36011014 + Fstl1 protein_coding processed_transcript MGP_LPJ_T0097997.1 MGP_LPJ_G0036278.1 mouse_genomes_project 16 34364738 34364832 - pseudogene pseudogene MGP_LPJ_T0042892.1 MGP_LPJ_G0022394.1 mouse_genomes_project 16 5101732 5122957 + MGP_LPJ_P0042892 Mettl22 protein_coding protein_coding MGP_LPJ_T0042893.1 MGP_LPJ_G0022394.1 mouse_genomes_project 16 5101735 5120955 + MGP_LPJ_P0042893 Mettl22 protein_coding protein_coding MGP_LPJ_T0042894.1 MGP_LPJ_G0022394.1 mouse_genomes_project 16 5101748 5116604 + MGP_LPJ_P0042894 Mettl22 protein_coding protein_coding MGP_LPJ_T0042895.1 MGP_LPJ_G0022394.1 mouse_genomes_project 16 5117838 5121116 + Mettl22 protein_coding retained_intron MGP_LPJ_T0042896.1 MGP_LPJ_G0022394.1 mouse_genomes_project 16 5119106 5122469 + Mettl22 protein_coding retained_intron MGP_LPJ_T0042712.1 MGP_LPJ_G0022351.1 mouse_genomes_project 16 216809 224510 + Zfp263 protein_coding retained_intron MGP_LPJ_T0042713.1 MGP_LPJ_G0022351.1 mouse_genomes_project 16 216816 223614 + Zfp263 protein_coding processed_transcript MGP_LPJ_T0042714.1 MGP_LPJ_G0022351.1 mouse_genomes_project 16 216866 224510 + MGP_LPJ_P0042714 Zfp263 protein_coding nonsense_mediated_decay MGP_LPJ_T0042715.1 MGP_LPJ_G0022351.1 mouse_genomes_project 16 216994 223001 + Zfp263 protein_coding processed_transcript MGP_LPJ_T0042716.1 MGP_LPJ_G0022351.1 mouse_genomes_project 16 217009 223585 + MGP_LPJ_P0042716 Zfp263 protein_coding protein_coding MGP_LPJ_T0042717.1 MGP_LPJ_G0022351.1 mouse_genomes_project 16 217231 222826 + Zfp263 protein_coding processed_transcript MGP_LPJ_T0006888.1 MGP_LPJ_G0005679.1 mouse_genomes_project 16 88212570 88222907 + 2810407A14Rik lincRNA lincRNA MGP_LPJ_T0006889.1 MGP_LPJ_G0005679.1 mouse_genomes_project 16 88216061 88271309 + 2810407A14Rik lincRNA lincRNA MGP_LPJ_T0043352.1 MGP_LPJ_G0022494.1 mouse_genomes_project 16 14864514 14868214 + MGP_LPJ_P0043352 Tssk1 protein_coding protein_coding MGP_LPJ_T0006860.1 MGP_LPJ_G0005659.1 mouse_genomes_project 16 27896855 27902714 - Gm26562 lincRNA lincRNA MGP_LPJ_T0043511.1 MGP_LPJ_G0022541.1 mouse_genomes_project 16 17334331 17356915 - MGP_LPJ_P0043511 Parl protein_coding nonsense_mediated_decay MGP_LPJ_T0043512.1 MGP_LPJ_G0022541.1 mouse_genomes_project 16 17334331 17356957 - MGP_LPJ_P0043512 Parl protein_coding protein_coding MGP_LPJ_T0043513.1 MGP_LPJ_G0022541.1 mouse_genomes_project 16 17334514 17337756 - Parl protein_coding retained_intron MGP_LPJ_T0043514.1 MGP_LPJ_G0022541.1 mouse_genomes_project 16 17337255 17356910 - Parl protein_coding retained_intron MGP_LPJ_T0043515.1 MGP_LPJ_G0022541.1 mouse_genomes_project 16 17340039 17342750 - Parl protein_coding retained_intron MGP_LPJ_T0043516.1 MGP_LPJ_G0022541.1 mouse_genomes_project 16 17341439 17355899 - Parl protein_coding processed_transcript MGP_LPJ_T0043517.1 MGP_LPJ_G0022541.1 mouse_genomes_project 16 17341465 17356924 - MGP_LPJ_P0043517 Parl protein_coding nonsense_mediated_decay MGP_LPJ_T0043518.1 MGP_LPJ_G0022541.1 mouse_genomes_project 16 17347489 17352735 - Parl protein_coding retained_intron MGP_LPJ_T0043519.1 MGP_LPJ_G0022541.1 mouse_genomes_project 16 17352166 17356383 - Parl protein_coding processed_transcript MGP_LPJ_T0043520.1 MGP_LPJ_G0022541.1 mouse_genomes_project 16 17352693 17356931 - Parl protein_coding retained_intron MGP_LPJ_T0045124.1 MGP_LPJ_G0022979.1 mouse_genomes_project 16 96185456 96231311 + MGP_LPJ_P0045124 Kcnj15 protein_coding protein_coding MGP_LPJ_T0045125.1 MGP_LPJ_G0022979.1 mouse_genomes_project 16 96185456 96230723 + MGP_LPJ_P0045125 Kcnj15 protein_coding protein_coding MGP_LPJ_T0045126.1 MGP_LPJ_G0022979.1 mouse_genomes_project 16 96185456 96231311 + MGP_LPJ_P0045126 Kcnj15 protein_coding protein_coding MGP_LPJ_T0045127.1 MGP_LPJ_G0022979.1 mouse_genomes_project 16 96185456 96231311 + MGP_LPJ_P0045127 Kcnj15 protein_coding protein_coding MGP_LPJ_T0045128.1 MGP_LPJ_G0022979.1 mouse_genomes_project 16 96185456 96229579 + MGP_LPJ_P0045128 Kcnj15 protein_coding protein_coding MGP_LPJ_T0045129.1 MGP_LPJ_G0022979.1 mouse_genomes_project 16 96185549 96231360 + MGP_LPJ_P0045129 Kcnj15 protein_coding protein_coding MGP_LPJ_T0045130.1 MGP_LPJ_G0022979.1 mouse_genomes_project 16 96185557 96226684 + MGP_LPJ_P0045130 Kcnj15 protein_coding protein_coding MGP_LPJ_T0045131.1 MGP_LPJ_G0022979.1 mouse_genomes_project 16 96185557 96227019 + MGP_LPJ_P0045131 Kcnj15 protein_coding protein_coding MGP_LPJ_T0045132.1 MGP_LPJ_G0022979.1 mouse_genomes_project 16 96185581 96226661 + MGP_LPJ_P0045132 Kcnj15 protein_coding protein_coding MGP_LPJ_T0045133.1 MGP_LPJ_G0022979.1 mouse_genomes_project 16 96187280 96231311 + MGP_LPJ_P0045133 Kcnj15 protein_coding protein_coding MGP_LPJ_T0045134.1 MGP_LPJ_G0022979.1 mouse_genomes_project 16 96187435 96222813 + Kcnj15 protein_coding processed_transcript MGP_LPJ_T0045135.1 MGP_LPJ_G0022979.1 mouse_genomes_project 16 96187496 96231311 + MGP_LPJ_P0045135 Kcnj15 protein_coding protein_coding MGP_LPJ_T0045136.1 MGP_LPJ_G0022979.1 mouse_genomes_project 16 96208412 96222876 + MGP_LPJ_P0045136 Kcnj15 protein_coding protein_coding MGP_LPJ_T0044835.1 MGP_LPJ_G0022909.1 mouse_genomes_project 16 89522342 89522722 - MGP_LPJ_P0044835 Krtap22-2 protein_coding protein_coding MGP_LPJ_T0042796.1 MGP_LPJ_G0022368.1 mouse_genomes_project 16 1120084 1120609 - protein_coding retained_intron MGP_LPJ_T0042797.1 MGP_LPJ_G0022368.1 mouse_genomes_project 16 1120084 1129889 - MGP_LPJ_P0042797 protein_coding nonsense_mediated_decay MGP_LPJ_T0042798.1 MGP_LPJ_G0022368.1 mouse_genomes_project 16 1120084 1129941 - MGP_LPJ_P0042798 protein_coding protein_coding MGP_LPJ_T0042799.1 MGP_LPJ_G0022368.1 mouse_genomes_project 16 1120222 1121775 - protein_coding retained_intron MGP_LPJ_T0043847.1 MGP_LPJ_G0022620.1 mouse_genomes_project 16 29016600 29043327 - MGP_LPJ_P0043847 Ppp1r2 protein_coding protein_coding MGP_LPJ_T0043848.1 MGP_LPJ_G0022620.1 mouse_genomes_project 16 29019157 29043020 - MGP_LPJ_P0043848 Ppp1r2 protein_coding unknown_likely_coding MGP_LPJ_T0043849.1 MGP_LPJ_G0022620.1 mouse_genomes_project 16 29024717 29043042 - MGP_LPJ_P0043849 Ppp1r2 protein_coding protein_coding MGP_LPJ_T0043659.1 MGP_LPJ_G0022568.1 mouse_genomes_project 16 19272991 19387425 - Igf2bp2 protein_coding retained_intron MGP_LPJ_T0043660.1 MGP_LPJ_G0022568.1 mouse_genomes_project 16 19273003 19304210 - Igf2bp2 protein_coding retained_intron MGP_LPJ_T0043661.1 MGP_LPJ_G0022568.1 mouse_genomes_project 16 19274722 19387369 - MGP_LPJ_P0043661 Igf2bp2 protein_coding protein_coding MGP_LPJ_T0043662.1 MGP_LPJ_G0022568.1 mouse_genomes_project 16 19275295 19277627 - Igf2bp2 protein_coding retained_intron MGP_LPJ_T0043663.1 MGP_LPJ_G0022568.1 mouse_genomes_project 16 19291094 19294195 - Igf2bp2 protein_coding retained_intron MGP_LPJ_T0043664.1 MGP_LPJ_G0022568.1 mouse_genomes_project 16 19299029 19358218 - Igf2bp2 protein_coding processed_transcript MGP_LPJ_T0043665.1 MGP_LPJ_G0022568.1 mouse_genomes_project 16 19374586 19387398 - Igf2bp2 protein_coding processed_transcript MGP_LPJ_T0043666.1 MGP_LPJ_G0022568.1 mouse_genomes_project 16 19385286 19387381 - Igf2bp2 protein_coding retained_intron MGP_LPJ_T0006883.1 MGP_LPJ_G0005676.1 mouse_genomes_project 16 75817291 75831063 + lincRNA lincRNA MGP_LPJ_T0044506.1 MGP_LPJ_G0022781.1 mouse_genomes_project 16 54108519 54170497 - MGP_LPJ_P0044506 Zpld1 protein_coding protein_coding MGP_LPJ_T0044507.1 MGP_LPJ_G0022781.1 mouse_genomes_project 16 54108519 54184969 - MGP_LPJ_P0044507 Zpld1 protein_coding protein_coding MGP_LPJ_T0010150.1 MGP_LPJ_G0008268.1 mouse_genomes_project 16 31014740 31014825 + Mir1947 miRNA miRNA MGP_LPJ_T0099154.1 MGP_LPJ_G0037417.1 mouse_genomes_project 16 5414398 5414506 - Gm25805 snRNA snRNA MGP_LPJ_T0044061.1 MGP_LPJ_G0022667.1 mouse_genomes_project 16 33020883 33128027 + MGP_LPJ_P0044061 Hacd2 protein_coding protein_coding MGP_LPJ_T0099175.1 MGP_LPJ_G0037438.1 mouse_genomes_project 16 34314898 34315002 - Gm25024 snRNA snRNA MGP_LPJ_T0043681.1 MGP_LPJ_G0022573.1 mouse_genomes_project 16 20082809 20089326 - MGP_LPJ_P0043681 Crygs protein_coding protein_coding MGP_LPJ_T0010163.1 MGP_LPJ_G0008281.1 mouse_genomes_project 16 57729067 57729163 - Gm27564 miRNA miRNA MGP_LPJ_T0043802.1 MGP_LPJ_G0022608.1 mouse_genomes_project 16 27229084 27306702 + MGP_LPJ_P0043802 Opa1 protein_coding protein_coding MGP_LPJ_T0043803.1 MGP_LPJ_G0022608.1 mouse_genomes_project 16 27229128 27263744 + Opa1 protein_coding retained_intron MGP_LPJ_T0043804.1 MGP_LPJ_G0022608.1 mouse_genomes_project 16 27229130 27299476 + MGP_LPJ_P0043804 Opa1 protein_coding protein_coding MGP_LPJ_T0043805.1 MGP_LPJ_G0022608.1 mouse_genomes_project 16 27229130 27303443 + MGP_LPJ_P0043805 Opa1 protein_coding protein_coding MGP_LPJ_T0043806.1 MGP_LPJ_G0022608.1 mouse_genomes_project 16 27229130 27279355 + MGP_LPJ_P0043806 Opa1 protein_coding nonsense_mediated_decay MGP_LPJ_T0043807.1 MGP_LPJ_G0022608.1 mouse_genomes_project 16 27229142 27303446 + Opa1 protein_coding retained_intron MGP_LPJ_T0043808.1 MGP_LPJ_G0022608.1 mouse_genomes_project 16 27235178 27260027 + MGP_LPJ_P0043808 Opa1 protein_coding protein_coding MGP_LPJ_T0043809.1 MGP_LPJ_G0022608.1 mouse_genomes_project 16 27265744 27267830 + Opa1 protein_coding retained_intron MGP_LPJ_T0043762.1 MGP_LPJ_G0022596.1 mouse_genomes_project 16 23973061 24003440 + MGP_LPJ_P0043762 Cldn16 protein_coding protein_coding MGP_LPJ_T0043763.1 MGP_LPJ_G0022596.1 mouse_genomes_project 16 23973182 24003438 + MGP_LPJ_P0043763 Cldn16 protein_coding protein_coding MGP_LPJ_T0100428.1 MGP_LPJ_G0038691.1 mouse_genomes_project 16 33417295 33417498 + Gm25079 snoRNA snoRNA MGP_LPJ_T0042741.1 MGP_LPJ_G0022358.1 mouse_genomes_project 16 363150 380032 + MGP_LPJ_P0042741 Cluap1 protein_coding protein_coding MGP_LPJ_T0042742.1 MGP_LPJ_G0022358.1 mouse_genomes_project 16 363174 397588 + MGP_LPJ_P0042742 Cluap1 protein_coding protein_coding MGP_LPJ_T0042743.1 MGP_LPJ_G0022358.1 mouse_genomes_project 16 363388 367922 + Cluap1 protein_coding retained_intron MGP_LPJ_T0042744.1 MGP_LPJ_G0022358.1 mouse_genomes_project 16 363425 385994 + MGP_LPJ_P0042744 Cluap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0042745.1 MGP_LPJ_G0022358.1 mouse_genomes_project 16 363455 380088 + MGP_LPJ_P0042745 Cluap1 protein_coding protein_coding MGP_LPJ_T0098507.1 MGP_LPJ_G0036783.1 mouse_genomes_project 16 28718171 28722297 - Gm15742 sense_intronic sense_intronic MGP_LPJ_T0044215.1 MGP_LPJ_G0022710.1 mouse_genomes_project 16 36448485 36499849 - MGP_LPJ_P0044215 Nr1i2 protein_coding protein_coding MGP_LPJ_T0099187.1 MGP_LPJ_G0037450.1 mouse_genomes_project 16 46101455 46101562 - Gm24651 snRNA snRNA MGP_LPJ_T0044733.1 MGP_LPJ_G0022863.1 mouse_genomes_project 16 77458085 77471741 - MGP_LPJ_P0044733 Gm11146 protein_coding protein_coding MGP_LPJ_T0017467.1 MGP_LPJ_G0015244.1 mouse_genomes_project 16 92184686 92190278 + A930006K02Rik processed_transcript processed_transcript MGP_LPJ_T0100455.1 MGP_LPJ_G0038718.1 mouse_genomes_project 16 87253064 87253189 + Gm25715 snoRNA snoRNA MGP_LPJ_T0003708.1 MGP_LPJ_G0003354.1 mouse_genomes_project 16 97076037 97076642 + antisense antisense MGP_LPJ_T0043655.1 MGP_LPJ_G0022565.1 mouse_genomes_project 16 19143909 19150991 - MGP_LPJ_P0043655 Tmem41a protein_coding protein_coding MGP_LPJ_T0006895.1 MGP_LPJ_G0005683.1 mouse_genomes_project 16 94221522 94268597 - 1700029J03Rik lincRNA lincRNA MGP_LPJ_T0006896.1 MGP_LPJ_G0005683.1 mouse_genomes_project 16 94226585 94304525 - 1700029J03Rik lincRNA lincRNA MGP_LPJ_T0010141.1 MGP_LPJ_G0008259.1 mouse_genomes_project 16 18416193 18416247 - Mir7680 miRNA miRNA MGP_LPJ_T0013133.1 MGP_LPJ_G0011224.1 mouse_genomes_project 16 15958061 15958350 + processed_pseudogene processed_pseudogene MGP_LPJ_T0044837.1 MGP_LPJ_G0022911.1 mouse_genomes_project 16 89545834 89546422 + MGP_LPJ_P0044837 Krtap6-1 protein_coding protein_coding MGP_LPJ_T0044015.1 MGP_LPJ_G0022656.1 mouse_genomes_project 16 31177035 31227851 + MGP_LPJ_P0044015 Snx4 protein_coding protein_coding MGP_LPJ_T0044641.1 MGP_LPJ_G0022834.1 mouse_genomes_project 16 58557530 58578083 + MGP_LPJ_P0044641 Mina protein_coding protein_coding MGP_LPJ_T0044642.1 MGP_LPJ_G0022834.1 mouse_genomes_project 16 58557559 58563321 + MGP_LPJ_P0044642 Mina protein_coding protein_coding MGP_LPJ_T0044643.1 MGP_LPJ_G0022834.1 mouse_genomes_project 16 58557577 58577290 + MGP_LPJ_P0044643 Mina protein_coding protein_coding MGP_LPJ_T0044644.1 MGP_LPJ_G0022834.1 mouse_genomes_project 16 58557823 58577913 + MGP_LPJ_P0044644 Mina protein_coding protein_coding MGP_LPJ_T0044645.1 MGP_LPJ_G0022834.1 mouse_genomes_project 16 58558098 58561512 + MGP_LPJ_P0044645 Mina protein_coding protein_coding MGP_LPJ_T0044646.1 MGP_LPJ_G0022834.1 mouse_genomes_project 16 58573168 58575450 + Mina protein_coding retained_intron MGP_LPJ_T0044020.1 MGP_LPJ_G0022659.1 mouse_genomes_project 16 31634531 31675922 + Heg1 protein_coding retained_intron MGP_LPJ_T0044021.1 MGP_LPJ_G0022659.1 mouse_genomes_project 16 31634531 31726425 + MGP_LPJ_P0044021 Heg1 protein_coding protein_coding MGP_LPJ_T0044022.1 MGP_LPJ_G0022659.1 mouse_genomes_project 16 31634610 31724292 + MGP_LPJ_P0044022 Heg1 protein_coding protein_coding MGP_LPJ_T0044023.1 MGP_LPJ_G0022659.1 mouse_genomes_project 16 31634677 31726406 + MGP_LPJ_P0044023 Heg1 protein_coding unknown_likely_coding MGP_LPJ_T0044024.1 MGP_LPJ_G0022659.1 mouse_genomes_project 16 31685342 31694020 + Heg1 protein_coding processed_transcript MGP_LPJ_T0044025.1 MGP_LPJ_G0022659.1 mouse_genomes_project 16 31708065 31715862 + Heg1 protein_coding retained_intron MGP_LPJ_T0044026.1 MGP_LPJ_G0022659.1 mouse_genomes_project 16 31710441 31723683 + Heg1 protein_coding processed_transcript MGP_LPJ_T0044027.1 MGP_LPJ_G0022659.1 mouse_genomes_project 16 31711414 31715708 + Heg1 protein_coding retained_intron MGP_LPJ_T0099156.1 MGP_LPJ_G0037419.1 mouse_genomes_project 16 7790915 7791099 + Gm24961 snRNA snRNA MGP_LPJ_T0010156.1 MGP_LPJ_G0008274.1 mouse_genomes_project 16 42224442 42224559 + Gm25996 miRNA miRNA MGP_LPJ_T0101648.1 MGP_LPJ_G0039705.1 mouse_genomes_project 16 17550783 17553253 + unitary_pseudogene unitary_pseudogene MGP_LPJ_T0044256.1 MGP_LPJ_G0022721.1 mouse_genomes_project 16 36814051 36935324 - MGP_LPJ_P0044256 Arhgap31 protein_coding protein_coding MGP_LPJ_T0044257.1 MGP_LPJ_G0022721.1 mouse_genomes_project 16 36838925 36934949 - Arhgap31 protein_coding processed_transcript MGP_LPJ_T0044258.1 MGP_LPJ_G0022721.1 mouse_genomes_project 16 36858858 36934948 - Arhgap31 protein_coding retained_intron MGP_LPJ_T0044921.1 MGP_LPJ_G0022941.1 mouse_genomes_project 16 91973021 91975183 + MGP_LPJ_P0044921 Olig1 protein_coding protein_coding MGP_LPJ_T0044635.1 MGP_LPJ_G0022828.1 mouse_genomes_project 16 58357827 58358751 - MGP_LPJ_P0044635 Olfr202 protein_coding protein_coding MGP_LPJ_T0099178.1 MGP_LPJ_G0037441.1 mouse_genomes_project 16 34442969 34443074 + Gm24569 snRNA snRNA MGP_LPJ_T0043893.1 MGP_LPJ_G0022630.1 mouse_genomes_project 16 29895466 29913167 - MGP_LPJ_P0043893 Pigx protein_coding protein_coding MGP_LPJ_T0043894.1 MGP_LPJ_G0022630.1 mouse_genomes_project 16 29895468 29899207 - Pigx protein_coding processed_transcript MGP_LPJ_T0043895.1 MGP_LPJ_G0022630.1 mouse_genomes_project 16 29895472 29913144 - Pigx protein_coding processed_transcript MGP_LPJ_T0043896.1 MGP_LPJ_G0022630.1 mouse_genomes_project 16 29895472 29913178 - MGP_LPJ_P0043896 Pigx protein_coding protein_coding MGP_LPJ_T0043897.1 MGP_LPJ_G0022630.1 mouse_genomes_project 16 29895486 29913168 - MGP_LPJ_P0043897 Pigx protein_coding protein_coding MGP_LPJ_T0043898.1 MGP_LPJ_G0022630.1 mouse_genomes_project 16 29895509 29913147 - MGP_LPJ_P0043898 Pigx protein_coding nonsense_mediated_decay MGP_LPJ_T0043899.1 MGP_LPJ_G0022630.1 mouse_genomes_project 16 29896344 29913133 - MGP_LPJ_P0043899 Pigx protein_coding nonsense_mediated_decay MGP_LPJ_T0043900.1 MGP_LPJ_G0022630.1 mouse_genomes_project 16 29898354 29913136 - MGP_LPJ_P0043900 Pigx protein_coding nonsense_mediated_decay MGP_LPJ_T0043901.1 MGP_LPJ_G0022630.1 mouse_genomes_project 16 29898560 29913140 - MGP_LPJ_P0043901 Pigx protein_coding nonsense_mediated_decay MGP_LPJ_T0043902.1 MGP_LPJ_G0022630.1 mouse_genomes_project 16 29910113 29913151 - MGP_LPJ_P0043902 Pigx protein_coding nonsense_mediated_decay MGP_LPJ_T0044016.1 MGP_LPJ_G0022657.1 mouse_genomes_project 16 31336021 31438051 + MGP_LPJ_P0044016 Zfp148 protein_coding unknown_likely_coding MGP_LPJ_T0043737.1 MGP_LPJ_G0022585.1 mouse_genomes_project 16 20800399 20805227 + MGP_LPJ_P0043737 Rtp1 protein_coding protein_coding MGP_LPJ_T0010168.1 MGP_LPJ_G0008286.1 mouse_genomes_project 16 74084370 74084448 - Mir691 miRNA miRNA MGP_LPJ_T0000980.1 MGP_LPJ_G0000908.1 mouse_genomes_project 16 363174 363542 - TEC TEC MGP_LPJ_T0000981.1 MGP_LPJ_G0000908.1 mouse_genomes_project 16 363206 363542 - TEC TEC MGP_LPJ_T0043765.1 MGP_LPJ_G0022598.1 mouse_genomes_project 16 24103887 24255792 + MGP_LPJ_P0043765 Il1rap protein_coding protein_coding MGP_LPJ_T0043766.1 MGP_LPJ_G0022598.1 mouse_genomes_project 16 24103925 24254881 + MGP_LPJ_P0043766 Il1rap protein_coding protein_coding MGP_LPJ_T0043767.1 MGP_LPJ_G0022598.1 mouse_genomes_project 16 24103936 24230847 + MGP_LPJ_P0043767 Il1rap protein_coding protein_coding MGP_LPJ_T0043768.1 MGP_LPJ_G0022598.1 mouse_genomes_project 16 24103940 24246536 + MGP_LPJ_P0043768 Il1rap protein_coding protein_coding MGP_LPJ_T0043769.1 MGP_LPJ_G0022598.1 mouse_genomes_project 16 24150267 24243860 + MGP_LPJ_P0043769 Il1rap protein_coding nonsense_mediated_decay MGP_LPJ_T0043770.1 MGP_LPJ_G0022598.1 mouse_genomes_project 16 24252961 24260645 + MGP_LPJ_P0043770 Il1rap protein_coding nonsense_mediated_decay MGP_LPJ_T0043771.1 MGP_LPJ_G0022598.1 mouse_genomes_project 16 24257569 24258756 + Il1rap protein_coding processed_transcript MGP_LPJ_T0043233.1 MGP_LPJ_G0022475.1 mouse_genomes_project 16 14176491 14178844 + MGP_LPJ_P0043233 Tmem191c protein_coding protein_coding MGP_LPJ_T0043234.1 MGP_LPJ_G0022475.1 mouse_genomes_project 16 14176496 14178359 + MGP_LPJ_P0043234 Tmem191c protein_coding protein_coding MGP_LPJ_T0043235.1 MGP_LPJ_G0022475.1 mouse_genomes_project 16 14176510 14177663 + Tmem191c protein_coding processed_transcript MGP_LPJ_T0043236.1 MGP_LPJ_G0022475.1 mouse_genomes_project 16 14176524 14177279 + Tmem191c protein_coding retained_intron MGP_LPJ_T0043237.1 MGP_LPJ_G0022475.1 mouse_genomes_project 16 14176524 14178840 + MGP_LPJ_P0043237 Tmem191c protein_coding protein_coding MGP_LPJ_T0043238.1 MGP_LPJ_G0022475.1 mouse_genomes_project 16 14176530 14177585 + Tmem191c protein_coding processed_transcript MGP_LPJ_T0043239.1 MGP_LPJ_G0022475.1 mouse_genomes_project 16 14176616 14177920 + MGP_LPJ_P0043239 Tmem191c protein_coding protein_coding MGP_LPJ_T0043240.1 MGP_LPJ_G0022475.1 mouse_genomes_project 16 14176859 14178844 + MGP_LPJ_P0043240 Tmem191c protein_coding protein_coding MGP_LPJ_T0043241.1 MGP_LPJ_G0022475.1 mouse_genomes_project 16 14177042 14178388 + MGP_LPJ_P0043241 Tmem191c protein_coding protein_coding MGP_LPJ_T0043242.1 MGP_LPJ_G0022475.1 mouse_genomes_project 16 14177263 14178236 + Tmem191c protein_coding retained_intron MGP_LPJ_T0043243.1 MGP_LPJ_G0022475.1 mouse_genomes_project 16 14177277 14178349 + Tmem191c protein_coding retained_intron MGP_LPJ_T0043244.1 MGP_LPJ_G0022475.1 mouse_genomes_project 16 14177783 14183412 + Tmem191c protein_coding retained_intron MGP_LPJ_T0044385.1 MGP_LPJ_G0022748.1 mouse_genomes_project 16 43602818 43603595 + Ccdc80 protein_coding processed_transcript MGP_LPJ_T0044386.1 MGP_LPJ_G0022748.1 mouse_genomes_project 16 43602870 43604304 + Ccdc80 protein_coding processed_transcript MGP_LPJ_T0044387.1 MGP_LPJ_G0022748.1 mouse_genomes_project 16 43603006 43603760 + Ccdc80 protein_coding processed_transcript MGP_LPJ_T0044388.1 MGP_LPJ_G0022748.1 mouse_genomes_project 16 43603028 43641848 + MGP_LPJ_P0044388 Ccdc80 protein_coding protein_coding MGP_LPJ_T0044389.1 MGP_LPJ_G0022748.1 mouse_genomes_project 16 43603091 43604570 + Ccdc80 protein_coding processed_transcript MGP_LPJ_T0044390.1 MGP_LPJ_G0022748.1 mouse_genomes_project 16 43603452 43642107 + MGP_LPJ_P0044390 Ccdc80 protein_coding protein_coding MGP_LPJ_T0013165.1 MGP_LPJ_G0011256.1 mouse_genomes_project 16 41585665 41586821 + processed_pseudogene processed_pseudogene MGP_LPJ_T0043333.1 MGP_LPJ_G0022489.1 mouse_genomes_project 16 14707673 14721009 + MGP_LPJ_P0043333 Klhl22 protein_coding protein_coding MGP_LPJ_T0043334.1 MGP_LPJ_G0022489.1 mouse_genomes_project 16 14707676 14744237 + MGP_LPJ_P0043334 Klhl22 protein_coding protein_coding MGP_LPJ_T0043335.1 MGP_LPJ_G0022489.1 mouse_genomes_project 16 14707693 14721051 + MGP_LPJ_P0043335 Klhl22 protein_coding protein_coding MGP_LPJ_T0043336.1 MGP_LPJ_G0022489.1 mouse_genomes_project 16 14707718 14728322 + Klhl22 protein_coding retained_intron MGP_LPJ_T0043337.1 MGP_LPJ_G0022489.1 mouse_genomes_project 16 14707726 14744237 + MGP_LPJ_P0043337 Klhl22 protein_coding protein_coding MGP_LPJ_T0043338.1 MGP_LPJ_G0022489.1 mouse_genomes_project 16 14708410 14721002 + MGP_LPJ_P0043338 Klhl22 protein_coding protein_coding MGP_LPJ_T0043339.1 MGP_LPJ_G0022489.1 mouse_genomes_project 16 14710846 14744239 + MGP_LPJ_P0043339 Klhl22 protein_coding protein_coding MGP_LPJ_T0043340.1 MGP_LPJ_G0022489.1 mouse_genomes_project 16 14712210 14721026 + Klhl22 protein_coding retained_intron MGP_LPJ_T0043999.1 MGP_LPJ_G0022652.1 mouse_genomes_project 16 30918382 30964792 - MGP_LPJ_P0043999 Iqcg protein_coding protein_coding MGP_LPJ_T0044000.1 MGP_LPJ_G0022652.1 mouse_genomes_project 16 30919947 30928240 - Iqcg protein_coding processed_transcript MGP_LPJ_T0044001.1 MGP_LPJ_G0022652.1 mouse_genomes_project 16 30947217 30964820 - MGP_LPJ_P0044001 Iqcg protein_coding protein_coding MGP_LPJ_T0044002.1 MGP_LPJ_G0022652.1 mouse_genomes_project 16 30956481 30964787 - Iqcg protein_coding retained_intron MGP_LPJ_T0043741.1 MGP_LPJ_G0022588.1 mouse_genomes_project 16 21292585 21293849 - MGP_LPJ_P0043741 Sst protein_coding protein_coding MGP_LPJ_T0044855.1 MGP_LPJ_G0022927.1 mouse_genomes_project 16 90378286 90450015 - MGP_LPJ_P0044855 Tiam1 protein_coding protein_coding MGP_LPJ_T0044856.1 MGP_LPJ_G0022927.1 mouse_genomes_project 16 90378286 90571685 - MGP_LPJ_P0044856 Tiam1 protein_coding protein_coding MGP_LPJ_T0044857.1 MGP_LPJ_G0022927.1 mouse_genomes_project 16 90378286 90558503 - MGP_LPJ_P0044857 Tiam1 protein_coding protein_coding MGP_LPJ_T0044858.1 MGP_LPJ_G0022927.1 mouse_genomes_project 16 90378286 90571685 - MGP_LPJ_P0044858 Tiam1 protein_coding protein_coding MGP_LPJ_T0044859.1 MGP_LPJ_G0022927.1 mouse_genomes_project 16 90378291 90389260 - MGP_LPJ_P0044859 Tiam1 protein_coding protein_coding MGP_LPJ_T0044860.1 MGP_LPJ_G0022927.1 mouse_genomes_project 16 90378954 90409350 - MGP_LPJ_P0044860 Tiam1 protein_coding protein_coding MGP_LPJ_T0044861.1 MGP_LPJ_G0022927.1 mouse_genomes_project 16 90379082 90429983 - Tiam1 protein_coding retained_intron MGP_LPJ_T0044862.1 MGP_LPJ_G0022927.1 mouse_genomes_project 16 90379646 90386511 - Tiam1 protein_coding processed_transcript MGP_LPJ_T0044863.1 MGP_LPJ_G0022927.1 mouse_genomes_project 16 90382909 90391218 - MGP_LPJ_P0044863 Tiam1 protein_coding protein_coding MGP_LPJ_T0044864.1 MGP_LPJ_G0022927.1 mouse_genomes_project 16 90490669 90571685 - Tiam1 protein_coding processed_transcript MGP_LPJ_T0044865.1 MGP_LPJ_G0022927.1 mouse_genomes_project 16 90490710 90558413 - Tiam1 protein_coding processed_transcript MGP_LPJ_T0044866.1 MGP_LPJ_G0022927.1 mouse_genomes_project 16 90490780 90512728 - Tiam1 protein_coding processed_transcript MGP_LPJ_T0044867.1 MGP_LPJ_G0022927.1 mouse_genomes_project 16 90501961 90550346 - Tiam1 protein_coding retained_intron MGP_LPJ_T0044868.1 MGP_LPJ_G0022927.1 mouse_genomes_project 16 90502288 90570885 - Tiam1 protein_coding processed_transcript MGP_LPJ_T0044869.1 MGP_LPJ_G0022927.1 mouse_genomes_project 16 90550203 90577066 - Tiam1 protein_coding processed_transcript MGP_LPJ_T0045017.1 MGP_LPJ_G0022955.1 mouse_genomes_project 16 92806996 92864267 + MGP_LPJ_P0045017 Mrps6 protein_coding protein_coding MGP_LPJ_T0045020.1 MGP_LPJ_G0022955.1 mouse_genomes_project 16 92858292 92864267 + Mrps6 protein_coding processed_transcript MGP_LPJ_T0101912.1 MGP_LPJ_G0039949.1 mouse_genomes_project 16 58075073 58075991 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0043667.1 MGP_LPJ_G0022569.1 mouse_genomes_project 16 19460900 19461518 + MGP_LPJ_P0043667 protein_coding protein_coding MGP_LPJ_T0101281.1 MGP_LPJ_G0039512.1 mouse_genomes_project 16 36059157 36060247 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0044793.1 MGP_LPJ_G0022883.1 mouse_genomes_project 16 87889204 87901565 - MGP_LPJ_P0044793 Cct8 protein_coding protein_coding MGP_LPJ_T0044794.1 MGP_LPJ_G0022883.1 mouse_genomes_project 16 87889866 87901480 - MGP_LPJ_P0044794 Cct8 protein_coding protein_coding MGP_LPJ_T0044795.1 MGP_LPJ_G0022883.1 mouse_genomes_project 16 87889866 87901480 - MGP_LPJ_P0044795 Cct8 protein_coding nonsense_mediated_decay MGP_LPJ_T0044796.1 MGP_LPJ_G0022883.1 mouse_genomes_project 16 87890789 87894624 - MGP_LPJ_P0044796 Cct8 protein_coding protein_coding MGP_LPJ_T0044797.1 MGP_LPJ_G0022883.1 mouse_genomes_project 16 87891218 87891850 - Cct8 protein_coding retained_intron MGP_LPJ_T0044798.1 MGP_LPJ_G0022883.1 mouse_genomes_project 16 87891358 87892135 - Cct8 protein_coding retained_intron MGP_LPJ_T0044799.1 MGP_LPJ_G0022883.1 mouse_genomes_project 16 87891506 87892277 - Cct8 protein_coding retained_intron MGP_LPJ_T0044800.1 MGP_LPJ_G0022883.1 mouse_genomes_project 16 87894625 87897229 - Cct8 protein_coding processed_transcript MGP_LPJ_T0044801.1 MGP_LPJ_G0022883.1 mouse_genomes_project 16 87894711 87901551 - MGP_LPJ_P0044801 Cct8 protein_coding protein_coding MGP_LPJ_T0044802.1 MGP_LPJ_G0022883.1 mouse_genomes_project 16 87896268 87901396 - MGP_LPJ_P0044802 Cct8 protein_coding protein_coding MGP_LPJ_T0044892.1 MGP_LPJ_G0022935.1 mouse_genomes_project 16 91595603 91604617 - MGP_LPJ_P0044892 1110004E09Rik protein_coding protein_coding MGP_LPJ_T0044893.1 MGP_LPJ_G0022935.1 mouse_genomes_project 16 91595747 91599786 - MGP_LPJ_P0044893 1110004E09Rik protein_coding protein_coding MGP_LPJ_T0044894.1 MGP_LPJ_G0022935.1 mouse_genomes_project 16 91595764 91604717 - MGP_LPJ_P0044894 1110004E09Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0044895.1 MGP_LPJ_G0022935.1 mouse_genomes_project 16 91596913 91604513 - MGP_LPJ_P0044895 1110004E09Rik protein_coding protein_coding MGP_LPJ_T0044896.1 MGP_LPJ_G0022935.1 mouse_genomes_project 16 91596976 91604296 - MGP_LPJ_P0044896 1110004E09Rik protein_coding protein_coding MGP_LPJ_T0044897.1 MGP_LPJ_G0022935.1 mouse_genomes_project 16 91597174 91604616 - 1110004E09Rik protein_coding processed_transcript MGP_LPJ_T0044242.1 MGP_LPJ_G0022720.1 mouse_genomes_project 16 36772410 36806902 + MGP_LPJ_P0044242 Tmem39a protein_coding protein_coding MGP_LPJ_T0044243.1 MGP_LPJ_G0022720.1 mouse_genomes_project 16 36776524 36807874 + MGP_LPJ_P0044243 Tmem39a protein_coding protein_coding MGP_LPJ_T0044244.1 MGP_LPJ_G0022720.1 mouse_genomes_project 16 36776524 36807874 + MGP_LPJ_P0044244 Tmem39a protein_coding protein_coding MGP_LPJ_T0044245.1 MGP_LPJ_G0022720.1 mouse_genomes_project 16 36776573 36801587 + MGP_LPJ_P0044245 Tmem39a protein_coding protein_coding MGP_LPJ_T0044246.1 MGP_LPJ_G0022720.1 mouse_genomes_project 16 36776598 36788512 + Tmem39a protein_coding processed_transcript MGP_LPJ_T0044247.1 MGP_LPJ_G0022720.1 mouse_genomes_project 16 36777901 36797330 + MGP_LPJ_P0044247 Tmem39a protein_coding nonsense_mediated_decay MGP_LPJ_T0044248.1 MGP_LPJ_G0022720.1 mouse_genomes_project 16 36790763 36800755 + Tmem39a protein_coding retained_intron MGP_LPJ_T0044249.1 MGP_LPJ_G0022720.1 mouse_genomes_project 16 36791086 36807154 + MGP_LPJ_P0044249 Tmem39a protein_coding protein_coding MGP_LPJ_T0044250.1 MGP_LPJ_G0022720.1 mouse_genomes_project 16 36797438 36806654 + MGP_LPJ_P0044250 Tmem39a protein_coding protein_coding MGP_LPJ_T0044251.1 MGP_LPJ_G0022720.1 mouse_genomes_project 16 36800745 36802220 + Tmem39a protein_coding retained_intron MGP_LPJ_T0044252.1 MGP_LPJ_G0022720.1 mouse_genomes_project 16 36800822 36801969 + Tmem39a protein_coding retained_intron MGP_LPJ_T0044253.1 MGP_LPJ_G0022720.1 mouse_genomes_project 16 36800837 36806857 + MGP_LPJ_P0044253 Tmem39a protein_coding protein_coding MGP_LPJ_T0044254.1 MGP_LPJ_G0022720.1 mouse_genomes_project 16 36802540 36807058 + Tmem39a protein_coding processed_transcript MGP_LPJ_T0044255.1 MGP_LPJ_G0022720.1 mouse_genomes_project 16 36803368 36807018 + Tmem39a protein_coding retained_intron MGP_LPJ_T0043927.1 MGP_LPJ_G0022640.1 mouse_genomes_project 16 30257998 30267857 + MGP_LPJ_P0043927 Tctex1d2 protein_coding protein_coding MGP_LPJ_T0043928.1 MGP_LPJ_G0022640.1 mouse_genomes_project 16 30258026 30267855 + Tctex1d2 protein_coding retained_intron MGP_LPJ_T0044231.1 MGP_LPJ_G0022715.1 mouse_genomes_project 16 36603835 36640927 - MGP_LPJ_P0044231 Pla1a protein_coding protein_coding MGP_LPJ_T0017442.1 MGP_LPJ_G0015236.1 mouse_genomes_project 16 54875468 54890906 + Gm28037 processed_transcript processed_transcript MGP_LPJ_T0044748.1 MGP_LPJ_G0022871.1 mouse_genomes_project 16 84977864 85000852 - MGP_LPJ_P0044748 Mrpl39 protein_coding protein_coding MGP_LPJ_T0044749.1 MGP_LPJ_G0022871.1 mouse_genomes_project 16 84999277 85000340 - Mrpl39 protein_coding processed_transcript MGP_LPJ_T0100457.1 MGP_LPJ_G0038720.1 mouse_genomes_project 16 87936388 87936524 - Gm24891 snoRNA snoRNA MGP_LPJ_T0013137.1 MGP_LPJ_G0011228.1 mouse_genomes_project 16 16191924 16196266 - processed_pseudogene processed_pseudogene MGP_LPJ_T0043030.1 MGP_LPJ_G0022428.1 mouse_genomes_project 16 8743520 8775142 + MGP_LPJ_P0043030 Gm9961 protein_coding protein_coding MGP_LPJ_T0044428.1 MGP_LPJ_G0022759.1 mouse_genomes_project 16 44255706 44268723 - MGP_LPJ_P0044428 Abhd10 protein_coding protein_coding MGP_LPJ_T0044429.1 MGP_LPJ_G0022759.1 mouse_genomes_project 16 44257528 44268670 - MGP_LPJ_P0044429 Abhd10 protein_coding protein_coding MGP_LPJ_T0044430.1 MGP_LPJ_G0022759.1 mouse_genomes_project 16 44262753 44268653 - Abhd10 protein_coding processed_transcript MGP_LPJ_T0044431.1 MGP_LPJ_G0022759.1 mouse_genomes_project 16 44266116 44268675 - Abhd10 protein_coding processed_transcript MGP_LPJ_T0044432.1 MGP_LPJ_G0022759.1 mouse_genomes_project 16 44266623 44268668 - Abhd10 protein_coding processed_transcript MGP_LPJ_T0043917.1 MGP_LPJ_G0022635.1 mouse_genomes_project 16 30076822 30087243 + Wdr53 protein_coding processed_transcript MGP_LPJ_T0043918.1 MGP_LPJ_G0022635.1 mouse_genomes_project 16 30076822 30087564 + MGP_LPJ_P0043918 Wdr53 protein_coding protein_coding MGP_LPJ_T0043919.1 MGP_LPJ_G0022635.1 mouse_genomes_project 16 30076848 30087573 + MGP_LPJ_P0043919 Wdr53 protein_coding protein_coding MGP_LPJ_T0043920.1 MGP_LPJ_G0022635.1 mouse_genomes_project 16 30076996 30081607 + Wdr53 protein_coding retained_intron MGP_LPJ_T0043394.1 MGP_LPJ_G0022508.1 mouse_genomes_project 16 15245075 15282504 - MGP_LPJ_P0043394 Dgcr8 protein_coding protein_coding MGP_LPJ_T0043395.1 MGP_LPJ_G0022508.1 mouse_genomes_project 16 15245084 15282507 - MGP_LPJ_P0043395 Dgcr8 protein_coding protein_coding MGP_LPJ_T0043396.1 MGP_LPJ_G0022508.1 mouse_genomes_project 16 15246068 15258516 - Dgcr8 protein_coding processed_transcript MGP_LPJ_T0043397.1 MGP_LPJ_G0022508.1 mouse_genomes_project 16 15264450 15277823 - Dgcr8 protein_coding retained_intron MGP_LPJ_T0043398.1 MGP_LPJ_G0022508.1 mouse_genomes_project 16 15264633 15273457 - Dgcr8 protein_coding retained_intron MGP_LPJ_T0043399.1 MGP_LPJ_G0022508.1 mouse_genomes_project 16 15280840 15282428 - Dgcr8 protein_coding processed_transcript MGP_LPJ_T0099162.1 MGP_LPJ_G0037425.1 mouse_genomes_project 16 15349290 15349438 + Gm26170 snRNA snRNA MGP_LPJ_T0003706.1 MGP_LPJ_G0003352.1 mouse_genomes_project 16 93080943 93084696 - 1700048M11Rik antisense antisense MGP_LPJ_T0044669.1 MGP_LPJ_G0022841.1 mouse_genomes_project 16 62112147 62188582 + MGP_LPJ_P0044669 Pros1 protein_coding protein_coding MGP_LPJ_T0044670.1 MGP_LPJ_G0022841.1 mouse_genomes_project 16 62152853 62156318 + Pros1 protein_coding retained_intron MGP_LPJ_T0044671.1 MGP_LPJ_G0022841.1 mouse_genomes_project 16 62180756 62187626 + Pros1 protein_coding processed_transcript MGP_LPJ_T0044838.1 MGP_LPJ_G0022912.1 mouse_genomes_project 16 89557638 89558170 - MGP_LPJ_P0044838 protein_coding protein_coding MGP_LPJ_T0044234.1 MGP_LPJ_G0022718.1 mouse_genomes_project 16 36709549 36734132 - MGP_LPJ_P0044234 Timmdc1 protein_coding protein_coding MGP_LPJ_T0044235.1 MGP_LPJ_G0022718.1 mouse_genomes_project 16 36728128 36734110 - Timmdc1 protein_coding processed_transcript MGP_LPJ_T0044003.1 MGP_LPJ_G0022653.1 mouse_genomes_project 16 30965054 30968779 + MGP_LPJ_P0044003 Rpl35a protein_coding protein_coding MGP_LPJ_T0044004.1 MGP_LPJ_G0022653.1 mouse_genomes_project 16 30965067 30968766 + MGP_LPJ_P0044004 Rpl35a protein_coding protein_coding MGP_LPJ_T0044005.1 MGP_LPJ_G0022653.1 mouse_genomes_project 16 30965083 30968765 + Rpl35a protein_coding retained_intron MGP_LPJ_T0044006.1 MGP_LPJ_G0022653.1 mouse_genomes_project 16 30965125 30966132 + Rpl35a protein_coding retained_intron MGP_LPJ_T0044007.1 MGP_LPJ_G0022653.1 mouse_genomes_project 16 30965128 30968755 + MGP_LPJ_P0044007 Rpl35a protein_coding protein_coding MGP_LPJ_T0044008.1 MGP_LPJ_G0022653.1 mouse_genomes_project 16 30965407 30968765 + MGP_LPJ_P0044008 Rpl35a protein_coding protein_coding MGP_LPJ_T0044009.1 MGP_LPJ_G0022653.1 mouse_genomes_project 16 30965619 30968746 + MGP_LPJ_P0044009 Rpl35a protein_coding protein_coding MGP_LPJ_T0043362.1 MGP_LPJ_G0022499.1 mouse_genomes_project 16 14960094 14962056 + MGP_LPJ_P0043362 protein_coding protein_coding MGP_LPJ_T0044460.1 MGP_LPJ_G0022767.1 mouse_genomes_project 16 47045956 47247977 + MGP_LPJ_P0044460 Morc1 protein_coding protein_coding MGP_LPJ_T0013182.1 MGP_LPJ_G0011273.1 mouse_genomes_project 16 74738473 74739481 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013157.1 MGP_LPJ_G0011248.1 mouse_genomes_project 16 34899124 34899893 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010161.1 MGP_LPJ_G0008279.1 mouse_genomes_project 16 54386464 54386531 + Mir5118 miRNA miRNA MGP_LPJ_T0043781.1 MGP_LPJ_G0022603.1 mouse_genomes_project 16 25753541 26040657 - MGP_LPJ_P0043781 Fgf12 protein_coding protein_coding MGP_LPJ_T0013126.1 MGP_LPJ_G0011217.1 mouse_genomes_project 16 12304193 12305247 + processed_pseudogene processed_pseudogene MGP_LPJ_T0042849.1 MGP_LPJ_G0022382.1 mouse_genomes_project 16 1519717 1520736 + MGP_LPJ_P0042849 Smim22 protein_coding protein_coding MGP_LPJ_T0042850.1 MGP_LPJ_G0022382.1 mouse_genomes_project 16 1519745 1520472 + Smim22 protein_coding retained_intron MGP_LPJ_T0042851.1 MGP_LPJ_G0022382.1 mouse_genomes_project 16 1519766 1520739 + MGP_LPJ_P0042851 Smim22 protein_coding protein_coding MGP_LPJ_T0042852.1 MGP_LPJ_G0022382.1 mouse_genomes_project 16 1519781 1520739 + Smim22 protein_coding processed_transcript MGP_LPJ_T0042853.1 MGP_LPJ_G0022382.1 mouse_genomes_project 16 1519781 1520739 + MGP_LPJ_P0042853 Smim22 protein_coding protein_coding MGP_LPJ_T0042854.1 MGP_LPJ_G0022382.1 mouse_genomes_project 16 1519781 1520736 + MGP_LPJ_P0042854 Smim22 protein_coding protein_coding MGP_LPJ_T0042855.1 MGP_LPJ_G0022382.1 mouse_genomes_project 16 1519788 1520739 + Smim22 protein_coding processed_transcript MGP_LPJ_T0042856.1 MGP_LPJ_G0022382.1 mouse_genomes_project 16 1520197 1520739 + Smim22 protein_coding retained_intron MGP_LPJ_T0013155.1 MGP_LPJ_G0011246.1 mouse_genomes_project 16 30586816 30587756 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006897.1 MGP_LPJ_G0005684.1 mouse_genomes_project 16 94662139 94664878 - 2310043M15Rik lincRNA lincRNA MGP_LPJ_T0044676.1 MGP_LPJ_G0022846.1 mouse_genomes_project 16 64163721 64171233 + MGP_LPJ_P0044676 Cggbp1 protein_coding protein_coding MGP_LPJ_T0044677.1 MGP_LPJ_G0022846.1 mouse_genomes_project 16 64164427 64167712 + Cggbp1 protein_coding retained_intron MGP_LPJ_T0043487.1 MGP_LPJ_G0022528.1 mouse_genomes_project 16 16547442 16548381 - MGP_LPJ_P0043487 Olfr167 protein_coding protein_coding MGP_LPJ_T0006855.1 MGP_LPJ_G0005654.1 mouse_genomes_project 16 22507503 22516917 + A230028O05Rik lincRNA lincRNA MGP_LPJ_T0003707.1 MGP_LPJ_G0003353.1 mouse_genomes_project 16 93400167 93407374 + Gm26626 antisense antisense MGP_LPJ_T0044036.1 MGP_LPJ_G0022663.1 mouse_genomes_project 16 31940046 32063968 - MGP_LPJ_P0044036 protein_coding protein_coding MGP_LPJ_T0044037.1 MGP_LPJ_G0022663.1 mouse_genomes_project 16 31940952 31944518 - protein_coding retained_intron MGP_LPJ_T0044038.1 MGP_LPJ_G0022663.1 mouse_genomes_project 16 31941284 32433247 - MGP_LPJ_P0044038 protein_coding protein_coding MGP_LPJ_T0044039.1 MGP_LPJ_G0022663.1 mouse_genomes_project 16 31978531 32133062 - MGP_LPJ_P0044039 protein_coding protein_coding MGP_LPJ_T0044040.1 MGP_LPJ_G0022663.1 mouse_genomes_project 16 31978536 32065071 - MGP_LPJ_P0044040 protein_coding protein_coding MGP_LPJ_T0044041.1 MGP_LPJ_G0022663.1 mouse_genomes_project 16 31978536 32367194 - MGP_LPJ_P0044041 protein_coding protein_coding MGP_LPJ_T0044042.1 MGP_LPJ_G0022663.1 mouse_genomes_project 16 31978545 32064009 - MGP_LPJ_P0044042 protein_coding protein_coding MGP_LPJ_T0044043.1 MGP_LPJ_G0022663.1 mouse_genomes_project 16 31979066 32063861 - MGP_LPJ_P0044043 protein_coding unknown_likely_coding MGP_LPJ_T0044044.1 MGP_LPJ_G0022663.1 mouse_genomes_project 16 32014937 32555385 - MGP_LPJ_P0044044 protein_coding protein_coding MGP_LPJ_T0044045.1 MGP_LPJ_G0022663.1 mouse_genomes_project 16 32121809 32492169 - MGP_LPJ_P0044045 protein_coding protein_coding MGP_LPJ_T0044046.1 MGP_LPJ_G0022663.1 mouse_genomes_project 16 32121810 32237385 - MGP_LPJ_P0044046 protein_coding protein_coding MGP_LPJ_T0044047.1 MGP_LPJ_G0022663.1 mouse_genomes_project 16 32121820 32492207 - MGP_LPJ_P0044047 protein_coding protein_coding MGP_LPJ_T0044048.1 MGP_LPJ_G0022663.1 mouse_genomes_project 16 32121880 32237150 - MGP_LPJ_P0044048 protein_coding protein_coding MGP_LPJ_T0044049.1 MGP_LPJ_G0022663.1 mouse_genomes_project 16 32123185 32237378 - MGP_LPJ_P0044049 protein_coding protein_coding MGP_LPJ_T0044050.1 MGP_LPJ_G0022663.1 mouse_genomes_project 16 32123252 32492065 - MGP_LPJ_P0044050 protein_coding protein_coding MGP_LPJ_T0044051.1 MGP_LPJ_G0022663.1 mouse_genomes_project 16 32147760 32237024 - MGP_LPJ_P0044051 protein_coding protein_coding MGP_LPJ_T0044052.1 MGP_LPJ_G0022663.1 mouse_genomes_project 16 32192969 32237095 - protein_coding retained_intron MGP_LPJ_T0044053.1 MGP_LPJ_G0022663.1 mouse_genomes_project 16 32218323 32226500 - protein_coding processed_transcript MGP_LPJ_T0044054.1 MGP_LPJ_G0022663.1 mouse_genomes_project 16 32331966 32336855 - protein_coding processed_transcript MGP_LPJ_T0044055.1 MGP_LPJ_G0022663.1 mouse_genomes_project 16 32490891 32492236 - protein_coding processed_transcript MGP_LPJ_T0044629.1 MGP_LPJ_G0022822.1 mouse_genomes_project 16 58183149 58188557 - MGP_LPJ_P0044629 protein_coding protein_coding MGP_LPJ_T0044112.1 MGP_LPJ_G0022686.1 mouse_genomes_project 16 34413866 34424015 - MGP_LPJ_P0044112 protein_coding protein_coding MGP_LPJ_T0044499.1 MGP_LPJ_G0022780.1 mouse_genomes_project 16 50996728 51211475 - MGP_LPJ_P0044499 Alcam protein_coding protein_coding MGP_LPJ_T0044500.1 MGP_LPJ_G0022780.1 mouse_genomes_project 16 50998841 51041098 - MGP_LPJ_P0044500 Alcam protein_coding protein_coding MGP_LPJ_T0044501.1 MGP_LPJ_G0022780.1 mouse_genomes_project 16 50999221 51209864 - MGP_LPJ_P0044501 Alcam protein_coding protein_coding MGP_LPJ_T0044502.1 MGP_LPJ_G0022780.1 mouse_genomes_project 16 51000942 51017957 - Alcam protein_coding retained_intron MGP_LPJ_T0044503.1 MGP_LPJ_G0022780.1 mouse_genomes_project 16 51000975 51020011 - Alcam protein_coding retained_intron MGP_LPJ_T0044504.1 MGP_LPJ_G0022780.1 mouse_genomes_project 16 51017056 51209864 - MGP_LPJ_P0044504 Alcam protein_coding protein_coding MGP_LPJ_T0044505.1 MGP_LPJ_G0022780.1 mouse_genomes_project 16 51054503 51210053 - MGP_LPJ_P0044505 Alcam protein_coding protein_coding MGP_LPJ_T0010175.1 MGP_LPJ_G0008293.1 mouse_genomes_project 16 91623432 91623506 + Gm22933 miRNA miRNA MGP_LPJ_T0044776.1 MGP_LPJ_G0022878.1 mouse_genomes_project 16 86208561 86255668 - MGP_LPJ_P0044776 Adamts5 protein_coding protein_coding MGP_LPJ_T0000994.1 MGP_LPJ_G0000921.1 mouse_genomes_project 16 77260235 77263341 + TEC TEC MGP_LPJ_T0000995.1 MGP_LPJ_G0000921.1 mouse_genomes_project 16 77261052 77261414 + TEC pseudogene MGP_LPJ_T0044715.1 MGP_LPJ_G0022858.1 mouse_genomes_project 16 75401265 75411271 + MGP_LPJ_P0044715 Rbm11 protein_coding protein_coding MGP_LPJ_T0044716.1 MGP_LPJ_G0022858.1 mouse_genomes_project 16 75401265 75412405 + MGP_LPJ_P0044716 Rbm11 protein_coding protein_coding MGP_LPJ_T0044717.1 MGP_LPJ_G0022858.1 mouse_genomes_project 16 75401312 75412401 + MGP_LPJ_P0044717 Rbm11 protein_coding protein_coding MGP_LPJ_T0043353.1 MGP_LPJ_G0022495.1 mouse_genomes_project 16 14868928 14870315 + MGP_LPJ_P0043353 Tssk2 protein_coding protein_coding MGP_LPJ_T0043745.1 MGP_LPJ_G0022591.1 mouse_genomes_project 16 21821885 22439928 + MGP_LPJ_P0043745 Lpp protein_coding protein_coding MGP_LPJ_T0043746.1 MGP_LPJ_G0022591.1 mouse_genomes_project 16 21881590 22439928 + MGP_LPJ_P0043746 Lpp protein_coding protein_coding MGP_LPJ_T0043747.1 MGP_LPJ_G0022591.1 mouse_genomes_project 16 22161741 22439928 + MGP_LPJ_P0043747 Lpp protein_coding protein_coding MGP_LPJ_T0043064.1 MGP_LPJ_G0022438.1 mouse_genomes_project 16 10741009 10820348 - MGP_LPJ_P0043064 Pdxdc1 protein_coding protein_coding MGP_LPJ_T0043065.1 MGP_LPJ_G0022438.1 mouse_genomes_project 16 10741439 10748682 - Pdxdc1 protein_coding processed_transcript MGP_LPJ_T0043067.1 MGP_LPJ_G0022438.1 mouse_genomes_project 16 10742509 10753785 - Pdxdc1 protein_coding processed_transcript MGP_LPJ_T0043068.1 MGP_LPJ_G0022438.1 mouse_genomes_project 16 10742514 10820242 - MGP_LPJ_P0043068 Pdxdc1 protein_coding protein_coding MGP_LPJ_T0043069.1 MGP_LPJ_G0022438.1 mouse_genomes_project 16 10742630 10745436 - Pdxdc1 protein_coding processed_transcript MGP_LPJ_T0043070.1 MGP_LPJ_G0022438.1 mouse_genomes_project 16 10743946 10820203 - Pdxdc1 protein_coding retained_intron MGP_LPJ_T0043071.1 MGP_LPJ_G0022438.1 mouse_genomes_project 16 10744161 10747691 - Pdxdc1 protein_coding processed_transcript MGP_LPJ_T0043072.1 MGP_LPJ_G0022438.1 mouse_genomes_project 16 10745310 10748687 - Pdxdc1 protein_coding processed_transcript MGP_LPJ_T0043073.1 MGP_LPJ_G0022438.1 mouse_genomes_project 16 10745987 10746716 - Pdxdc1 protein_coding retained_intron MGP_LPJ_T0043074.1 MGP_LPJ_G0022438.1 mouse_genomes_project 16 10755907 10820276 - MGP_LPJ_P0043074 Pdxdc1 protein_coding protein_coding MGP_LPJ_T0043075.1 MGP_LPJ_G0022438.1 mouse_genomes_project 16 10757471 10820352 - MGP_LPJ_P0043075 Pdxdc1 protein_coding protein_coding MGP_LPJ_T0043076.1 MGP_LPJ_G0022438.1 mouse_genomes_project 16 10771575 10793540 - Pdxdc1 protein_coding retained_intron MGP_LPJ_T0043077.1 MGP_LPJ_G0022438.1 mouse_genomes_project 16 10793370 10820206 - Pdxdc1 protein_coding processed_transcript MGP_LPJ_T0043078.1 MGP_LPJ_G0022438.1 mouse_genomes_project 16 10799001 10820196 - Pdxdc1 protein_coding processed_transcript MGP_LPJ_T0043079.1 MGP_LPJ_G0022438.1 mouse_genomes_project 16 10804307 10820201 - Pdxdc1 protein_coding retained_intron MGP_LPJ_T0013136.1 MGP_LPJ_G0011227.1 mouse_genomes_project 16 16048060 16048483 + processed_pseudogene processed_pseudogene MGP_LPJ_T0044848.1 MGP_LPJ_G0022920.1 mouse_genomes_project 16 89712832 89713375 + MGP_LPJ_P0044848 1110057P08Rik protein_coding protein_coding MGP_LPJ_T0010130.1 MGP_LPJ_G0008248.1 mouse_genomes_project 16 11089231 11089298 + Mir484 miRNA miRNA MGP_LPJ_T0000990.1 MGP_LPJ_G0000917.1 mouse_genomes_project 16 56869623 56870033 + TEC TEC MGP_LPJ_T0013153.1 MGP_LPJ_G0011244.1 mouse_genomes_project 16 29781059 29781342 - processed_pseudogene processed_pseudogene MGP_LPJ_T0045018.1 MGP_LPJ_G0022956.1 mouse_genomes_project 16 92807048 92837386 + MGP_LPJ_P0045018 Slc5a3 protein_coding protein_coding MGP_LPJ_T0045019.1 MGP_LPJ_G0022956.1 mouse_genomes_project 16 92826789 92833715 + MGP_LPJ_P0045019 Slc5a3 protein_coding protein_coding MGP_LPJ_T0044596.1 MGP_LPJ_G0022805.1 mouse_genomes_project 16 57594595 57597888 - MGP_LPJ_P0044596 Gm813 protein_coding protein_coding MGP_LPJ_T0044341.1 MGP_LPJ_G0022739.1 mouse_genomes_project 16 42811956 42854605 + MGP_LPJ_P0044341 Spice1 protein_coding protein_coding MGP_LPJ_T0044342.1 MGP_LPJ_G0022739.1 mouse_genomes_project 16 42812249 42835409 + Spice1 protein_coding processed_transcript MGP_LPJ_T0044343.1 MGP_LPJ_G0022739.1 mouse_genomes_project 16 42812881 42832389 + Spice1 protein_coding processed_transcript MGP_LPJ_T0044344.1 MGP_LPJ_G0022739.1 mouse_genomes_project 16 42832291 42835047 + Spice1 protein_coding retained_intron MGP_LPJ_T0044345.1 MGP_LPJ_G0022739.1 mouse_genomes_project 16 42832361 42835414 + Spice1 protein_coding retained_intron MGP_LPJ_T0044346.1 MGP_LPJ_G0022739.1 mouse_genomes_project 16 42834664 42851791 + Spice1 protein_coding retained_intron MGP_LPJ_T0044347.1 MGP_LPJ_G0022739.1 mouse_genomes_project 16 42835106 42838278 + Spice1 protein_coding processed_transcript MGP_LPJ_T0044348.1 MGP_LPJ_G0022739.1 mouse_genomes_project 16 42851468 42853217 + Spice1 protein_coding retained_intron MGP_LPJ_T0044058.1 MGP_LPJ_G0022665.1 mouse_genomes_project 16 32675637 32715224 + MGP_LPJ_P0044058 Ccdc14 protein_coding protein_coding MGP_LPJ_T0044127.1 MGP_LPJ_G0022692.1 mouse_genomes_project 16 34815814 34850406 + MGP_LPJ_P0044127 Ildr1 protein_coding protein_coding MGP_LPJ_T0044128.1 MGP_LPJ_G0022692.1 mouse_genomes_project 16 34815866 34841057 + Ildr1 protein_coding retained_intron MGP_LPJ_T0044129.1 MGP_LPJ_G0022692.1 mouse_genomes_project 16 34815993 34849217 + MGP_LPJ_P0044129 Ildr1 protein_coding protein_coding MGP_LPJ_T0044130.1 MGP_LPJ_G0022692.1 mouse_genomes_project 16 34839189 34845919 + Ildr1 protein_coding retained_intron MGP_LPJ_T0043862.1 MGP_LPJ_G0022623.1 mouse_genomes_project 16 29449857 29665142 + MGP_LPJ_P0043862 Dlg1 protein_coding protein_coding MGP_LPJ_T0043863.1 MGP_LPJ_G0022623.1 mouse_genomes_project 16 29450325 29663638 + MGP_LPJ_P0043863 Dlg1 protein_coding protein_coding MGP_LPJ_T0043864.1 MGP_LPJ_G0022623.1 mouse_genomes_project 16 29450351 29665148 + MGP_LPJ_P0043864 Dlg1 protein_coding protein_coding MGP_LPJ_T0043865.1 MGP_LPJ_G0022623.1 mouse_genomes_project 16 29450371 29665141 + MGP_LPJ_P0043865 Dlg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0043866.1 MGP_LPJ_G0022623.1 mouse_genomes_project 16 29450455 29665138 + MGP_LPJ_P0043866 Dlg1 protein_coding protein_coding MGP_LPJ_T0043867.1 MGP_LPJ_G0022623.1 mouse_genomes_project 16 29450566 29664476 + MGP_LPJ_P0043867 Dlg1 protein_coding protein_coding MGP_LPJ_T0043868.1 MGP_LPJ_G0022623.1 mouse_genomes_project 16 29471797 29569344 + Dlg1 protein_coding retained_intron MGP_LPJ_T0043869.1 MGP_LPJ_G0022623.1 mouse_genomes_project 16 29541626 29664053 + MGP_LPJ_P0043869 Dlg1 protein_coding protein_coding MGP_LPJ_T0043870.1 MGP_LPJ_G0022623.1 mouse_genomes_project 16 29587112 29631802 + MGP_LPJ_P0043870 Dlg1 protein_coding protein_coding MGP_LPJ_T0043871.1 MGP_LPJ_G0022623.1 mouse_genomes_project 16 29617884 29625469 + Dlg1 protein_coding retained_intron MGP_LPJ_T0043872.1 MGP_LPJ_G0022623.1 mouse_genomes_project 16 29625247 29648829 + MGP_LPJ_P0043872 Dlg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0043873.1 MGP_LPJ_G0022623.1 mouse_genomes_project 16 29627136 29642118 + Dlg1 protein_coding processed_transcript MGP_LPJ_T0043874.1 MGP_LPJ_G0022623.1 mouse_genomes_project 16 29636305 29648784 + Dlg1 protein_coding retained_intron MGP_LPJ_T0043875.1 MGP_LPJ_G0022623.1 mouse_genomes_project 16 29643725 29654997 + Dlg1 protein_coding retained_intron MGP_LPJ_T0043876.1 MGP_LPJ_G0022623.1 mouse_genomes_project 16 29659271 29663640 + Dlg1 protein_coding retained_intron MGP_LPJ_T0010152.1 MGP_LPJ_G0008270.1 mouse_genomes_project 16 38614877 38614979 - Gm27887 miRNA miRNA MGP_LPJ_T0100445.1 MGP_LPJ_G0038708.1 mouse_genomes_project 16 64500490 64500620 - Gm22429 snoRNA snoRNA MGP_LPJ_T0044108.1 MGP_LPJ_G0022682.1 mouse_genomes_project 16 34254228 34258903 + MGP_LPJ_P0044108 protein_coding protein_coding MGP_LPJ_T0100424.1 MGP_LPJ_G0038687.1 mouse_genomes_project 16 28635974 28636109 + Gm25375 snoRNA snoRNA MGP_LPJ_T0044465.1 MGP_LPJ_G0022772.1 mouse_genomes_project 16 47558362 47573705 - Dzip3 protein_coding retained_intron MGP_LPJ_T0044466.1 MGP_LPJ_G0022772.1 mouse_genomes_project 16 47558362 47629944 - MGP_LPJ_P0044466 Dzip3 protein_coding protein_coding MGP_LPJ_T0044467.1 MGP_LPJ_G0022772.1 mouse_genomes_project 16 47558364 47573613 - Dzip3 protein_coding retained_intron MGP_LPJ_T0044468.1 MGP_LPJ_G0022772.1 mouse_genomes_project 16 47560009 47629720 - MGP_LPJ_P0044468 Dzip3 protein_coding protein_coding MGP_LPJ_T0044469.1 MGP_LPJ_G0022772.1 mouse_genomes_project 16 47560996 47564372 - MGP_LPJ_P0044469 Dzip3 protein_coding protein_coding MGP_LPJ_T0044470.1 MGP_LPJ_G0022772.1 mouse_genomes_project 16 47561216 47565918 - Dzip3 protein_coding retained_intron MGP_LPJ_T0042938.1 MGP_LPJ_G0022405.1 mouse_genomes_project 16 7028819 7064089 - MGP_LPJ_P0042938 Emp2 protein_coding protein_coding MGP_LPJ_T0043823.1 MGP_LPJ_G0022615.1 mouse_genomes_project 16 28236130 28280696 - MGP_LPJ_P0043823 Tmem44 protein_coding unknown_likely_coding MGP_LPJ_T0043824.1 MGP_LPJ_G0022615.1 mouse_genomes_project 16 28236137 28280143 - Tmem44 protein_coding retained_intron MGP_LPJ_T0043825.1 MGP_LPJ_G0022615.1 mouse_genomes_project 16 28236137 28280767 - MGP_LPJ_P0043825 Tmem44 protein_coding nonsense_mediated_decay MGP_LPJ_T0043826.1 MGP_LPJ_G0022615.1 mouse_genomes_project 16 28237973 28280775 - MGP_LPJ_P0043826 Tmem44 protein_coding protein_coding MGP_LPJ_T0043827.1 MGP_LPJ_G0022615.1 mouse_genomes_project 16 28237975 28280775 - MGP_LPJ_P0043827 Tmem44 protein_coding nonsense_mediated_decay MGP_LPJ_T0043828.1 MGP_LPJ_G0022615.1 mouse_genomes_project 16 28238252 28270023 - MGP_LPJ_P0043828 Tmem44 protein_coding nonsense_mediated_decay MGP_LPJ_T0043829.1 MGP_LPJ_G0022615.1 mouse_genomes_project 16 28243358 28280736 - Tmem44 protein_coding retained_intron MGP_LPJ_T0043830.1 MGP_LPJ_G0022615.1 mouse_genomes_project 16 28243739 28281039 - Tmem44 protein_coding retained_intron MGP_LPJ_T0043831.1 MGP_LPJ_G0022615.1 mouse_genomes_project 16 28272826 28280725 - Tmem44 protein_coding processed_transcript MGP_LPJ_T0043988.1 MGP_LPJ_G0022651.1 mouse_genomes_project 16 30805483 30918645 + MGP_LPJ_P0043988 Lrch3 protein_coding protein_coding MGP_LPJ_T0043989.1 MGP_LPJ_G0022651.1 mouse_genomes_project 16 30805505 30916141 + MGP_LPJ_P0043989 Lrch3 protein_coding protein_coding MGP_LPJ_T0043990.1 MGP_LPJ_G0022651.1 mouse_genomes_project 16 30805505 30916141 + MGP_LPJ_P0043990 Lrch3 protein_coding protein_coding MGP_LPJ_T0043991.1 MGP_LPJ_G0022651.1 mouse_genomes_project 16 30805506 30891716 + Lrch3 protein_coding retained_intron MGP_LPJ_T0043992.1 MGP_LPJ_G0022651.1 mouse_genomes_project 16 30805510 30875511 + MGP_LPJ_P0043992 Lrch3 protein_coding nonsense_mediated_decay MGP_LPJ_T0043993.1 MGP_LPJ_G0022651.1 mouse_genomes_project 16 30805525 30915488 + MGP_LPJ_P0043993 Lrch3 protein_coding protein_coding MGP_LPJ_T0043994.1 MGP_LPJ_G0022651.1 mouse_genomes_project 16 30805525 30915697 + MGP_LPJ_P0043994 Lrch3 protein_coding protein_coding MGP_LPJ_T0043995.1 MGP_LPJ_G0022651.1 mouse_genomes_project 16 30856108 30863338 + Lrch3 protein_coding processed_transcript MGP_LPJ_T0043996.1 MGP_LPJ_G0022651.1 mouse_genomes_project 16 30882058 30901252 + MGP_LPJ_P0043996 Lrch3 protein_coding protein_coding MGP_LPJ_T0043997.1 MGP_LPJ_G0022651.1 mouse_genomes_project 16 30882086 30901194 + MGP_LPJ_P0043997 Lrch3 protein_coding protein_coding MGP_LPJ_T0043998.1 MGP_LPJ_G0022651.1 mouse_genomes_project 16 30888672 30901305 + MGP_LPJ_P0043998 Lrch3 protein_coding protein_coding MGP_LPJ_T0010145.1 MGP_LPJ_G0008263.1 mouse_genomes_project 16 22267857 22267943 + Mir28a miRNA miRNA MGP_LPJ_T0044522.1 MGP_LPJ_G0022787.1 mouse_genomes_project 16 54920272 54940430 - MGP_LPJ_P0044522 Pcnp protein_coding protein_coding MGP_LPJ_T0044523.1 MGP_LPJ_G0022787.1 mouse_genomes_project 16 54930501 54945543 - MGP_LPJ_P0044523 Pcnp protein_coding protein_coding MGP_LPJ_T0044524.1 MGP_LPJ_G0022787.1 mouse_genomes_project 16 54930844 54945490 - Pcnp protein_coding processed_transcript MGP_LPJ_T0044525.1 MGP_LPJ_G0022787.1 mouse_genomes_project 16 54931043 54945480 - MGP_LPJ_P0044525 Pcnp protein_coding nonsense_mediated_decay MGP_LPJ_T0044526.1 MGP_LPJ_G0022787.1 mouse_genomes_project 16 54932171 54945500 - MGP_LPJ_P0044526 Pcnp protein_coding protein_coding MGP_LPJ_T0010131.1 MGP_LPJ_G0008249.1 mouse_genomes_project 16 14018766 14018848 - Mir130b miRNA miRNA MGP_LPJ_T0044403.1 MGP_LPJ_G0022752.1 mouse_genomes_project 16 43905063 43933878 - MGP_LPJ_P0044403 Cd200 protein_coding protein_coding MGP_LPJ_T0044404.1 MGP_LPJ_G0022752.1 mouse_genomes_project 16 43905111 43933700 - MGP_LPJ_P0044404 Cd200 protein_coding protein_coding MGP_LPJ_T0044405.1 MGP_LPJ_G0022752.1 mouse_genomes_project 16 43906231 43933797 - Cd200 protein_coding processed_transcript MGP_LPJ_T0044406.1 MGP_LPJ_G0022752.1 mouse_genomes_project 16 43915188 43924944 - MGP_LPJ_P0044406 Cd200 protein_coding nonsense_mediated_decay MGP_LPJ_T0044407.1 MGP_LPJ_G0022752.1 mouse_genomes_project 16 43915188 43933738 - MGP_LPJ_P0044407 Cd200 protein_coding nonsense_mediated_decay MGP_LPJ_T0044408.1 MGP_LPJ_G0022752.1 mouse_genomes_project 16 43917563 43933848 - Cd200 protein_coding processed_transcript MGP_LPJ_T0044409.1 MGP_LPJ_G0022752.1 mouse_genomes_project 16 43917791 43933866 - Cd200 protein_coding processed_transcript MGP_LPJ_T0044410.1 MGP_LPJ_G0022752.1 mouse_genomes_project 16 43919896 43933842 - Cd200 protein_coding processed_transcript MGP_LPJ_T0044411.1 MGP_LPJ_G0022752.1 mouse_genomes_project 16 43924203 43933689 - Cd200 protein_coding retained_intron MGP_LPJ_T0044412.1 MGP_LPJ_G0022752.1 mouse_genomes_project 16 43924924 43933832 - Cd200 protein_coding processed_transcript MGP_LPJ_T0044413.1 MGP_LPJ_G0022752.1 mouse_genomes_project 16 43932063 43933843 - Cd200 protein_coding processed_transcript MGP_LPJ_T0013178.1 MGP_LPJ_G0011269.1 mouse_genomes_project 16 60279706 60279965 + processed_pseudogene processed_pseudogene MGP_LPJ_T0044172.1 MGP_LPJ_G0022699.1 mouse_genomes_project 16 35138609 35234850 + MGP_LPJ_P0044172 Polq protein_coding nonsense_mediated_decay MGP_LPJ_T0044173.1 MGP_LPJ_G0022699.1 mouse_genomes_project 16 35138609 35235255 + MGP_LPJ_P0044173 Polq protein_coding nonsense_mediated_decay MGP_LPJ_T0044174.1 MGP_LPJ_G0022699.1 mouse_genomes_project 16 35138609 35234850 + MGP_LPJ_P0044174 Polq protein_coding protein_coding MGP_LPJ_T0044175.1 MGP_LPJ_G0022699.1 mouse_genomes_project 16 35138609 35235275 + MGP_LPJ_P0044175 Polq protein_coding protein_coding MGP_LPJ_T0044176.1 MGP_LPJ_G0022699.1 mouse_genomes_project 16 35138638 35144405 + Polq protein_coding retained_intron MGP_LPJ_T0044177.1 MGP_LPJ_G0022699.1 mouse_genomes_project 16 35167378 35200086 + Polq protein_coding retained_intron MGP_LPJ_T0044178.1 MGP_LPJ_G0022699.1 mouse_genomes_project 16 35225779 35235275 + Polq protein_coding retained_intron MGP_LPJ_T0044300.1 MGP_LPJ_G0022731.1 mouse_genomes_project 16 42291469 42322017 - Qtrtd1 protein_coding retained_intron MGP_LPJ_T0044301.1 MGP_LPJ_G0022731.1 mouse_genomes_project 16 42291469 42322054 - MGP_LPJ_P0044301 Qtrtd1 protein_coding protein_coding MGP_LPJ_T0044302.1 MGP_LPJ_G0022731.1 mouse_genomes_project 16 42292846 42297945 - Qtrtd1 protein_coding retained_intron MGP_LPJ_T0044303.1 MGP_LPJ_G0022731.1 mouse_genomes_project 16 42293092 42360123 - Qtrtd1 protein_coding retained_intron MGP_LPJ_T0044304.1 MGP_LPJ_G0022731.1 mouse_genomes_project 16 42293132 42322004 - MGP_LPJ_P0044304 Qtrtd1 protein_coding unknown_likely_coding MGP_LPJ_T0044305.1 MGP_LPJ_G0022731.1 mouse_genomes_project 16 42297896 42299785 - Qtrtd1 protein_coding retained_intron MGP_LPJ_T0044306.1 MGP_LPJ_G0022731.1 mouse_genomes_project 16 42299335 42322025 - Qtrtd1 protein_coding retained_intron MGP_LPJ_T0044307.1 MGP_LPJ_G0022731.1 mouse_genomes_project 16 42302153 42309306 - Qtrtd1 protein_coding retained_intron MGP_LPJ_T0044308.1 MGP_LPJ_G0022731.1 mouse_genomes_project 16 42309124 42322024 - MGP_LPJ_P0044308 Qtrtd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0044309.1 MGP_LPJ_G0022731.1 mouse_genomes_project 16 42312640 42322025 - Qtrtd1 protein_coding retained_intron MGP_LPJ_T0043933.1 MGP_LPJ_G0022642.1 mouse_genomes_project 16 30319086 30332449 - MGP_LPJ_P0043933 Slc51a protein_coding protein_coding MGP_LPJ_T0006836.1 MGP_LPJ_G0005638.1 mouse_genomes_project 16 1444528 1449066 - Gm16861 lincRNA lincRNA MGP_LPJ_T0099186.1 MGP_LPJ_G0037449.1 mouse_genomes_project 16 44581472 44581579 - Gm24754 snRNA snRNA MGP_LPJ_T0044599.1 MGP_LPJ_G0022808.1 mouse_genomes_project 16 57696997 57698287 - MGP_LPJ_P0044599 Gpr15 protein_coding protein_coding MGP_LPJ_T0043554.1 MGP_LPJ_G0022547.1 mouse_genomes_project 16 17618254 17631426 + MGP_LPJ_P0043554 Abcf3 protein_coding protein_coding MGP_LPJ_T0043555.1 MGP_LPJ_G0022547.1 mouse_genomes_project 16 17619345 17621346 + Abcf3 protein_coding retained_intron MGP_LPJ_T0043556.1 MGP_LPJ_G0022547.1 mouse_genomes_project 16 17620254 17628552 + Abcf3 protein_coding retained_intron MGP_LPJ_T0043557.1 MGP_LPJ_G0022547.1 mouse_genomes_project 16 17629022 17630317 + Abcf3 protein_coding retained_intron MGP_LPJ_T0043558.1 MGP_LPJ_G0022547.1 mouse_genomes_project 16 17629335 17630865 + Abcf3 protein_coding retained_intron MGP_LPJ_T0044781.1 MGP_LPJ_G0022881.1 mouse_genomes_project 16 87837710 87844878 - MGP_LPJ_P0044781 Rwdd2b protein_coding protein_coding MGP_LPJ_T0044782.1 MGP_LPJ_G0022881.1 mouse_genomes_project 16 87840999 87844878 - Rwdd2b protein_coding processed_transcript MGP_LPJ_T0043491.1 MGP_LPJ_G0022532.1 mouse_genomes_project 16 16657369 16676536 - MGP_LPJ_P0043491 protein_coding protein_coding MGP_LPJ_T0044433.1 MGP_LPJ_G0022760.1 mouse_genomes_project 16 44271952 44370114 - MGP_LPJ_P0044433 Phldb2 protein_coding protein_coding MGP_LPJ_T0044434.1 MGP_LPJ_G0022760.1 mouse_genomes_project 16 44272103 44369970 - MGP_LPJ_P0044434 Phldb2 protein_coding protein_coding MGP_LPJ_T0044435.1 MGP_LPJ_G0022760.1 mouse_genomes_project 16 44272866 44327226 - MGP_LPJ_P0044435 Phldb2 protein_coding protein_coding MGP_LPJ_T0044436.1 MGP_LPJ_G0022760.1 mouse_genomes_project 16 44280127 44512443 - MGP_LPJ_P0044436 Phldb2 protein_coding protein_coding MGP_LPJ_T0044437.1 MGP_LPJ_G0022760.1 mouse_genomes_project 16 44286759 44296323 - Phldb2 protein_coding processed_transcript MGP_LPJ_T0044438.1 MGP_LPJ_G0022760.1 mouse_genomes_project 16 44301754 44313222 - Phldb2 protein_coding processed_transcript MGP_LPJ_T0044439.1 MGP_LPJ_G0022760.1 mouse_genomes_project 16 44304367 44315827 - MGP_LPJ_P0044439 Phldb2 protein_coding protein_coding MGP_LPJ_T0044440.1 MGP_LPJ_G0022760.1 mouse_genomes_project 16 44351656 44512338 - MGP_LPJ_P0044440 Phldb2 protein_coding protein_coding MGP_LPJ_T0044441.1 MGP_LPJ_G0022760.1 mouse_genomes_project 16 44351825 44370079 - Phldb2 protein_coding processed_transcript MGP_LPJ_T0044442.1 MGP_LPJ_G0022760.1 mouse_genomes_project 16 44457569 44458496 - Phldb2 protein_coding processed_transcript MGP_LPJ_T0044443.1 MGP_LPJ_G0022760.1 mouse_genomes_project 16 44457760 44512378 - Phldb2 protein_coding processed_transcript MGP_LPJ_T0003689.1 MGP_LPJ_G0003339.1 mouse_genomes_project 16 36507596 36509961 + Maats1os antisense antisense MGP_LPJ_T0044610.1 MGP_LPJ_G0022813.1 mouse_genomes_project 16 57910032 57918266 - MGP_LPJ_P0044610 Olfr178 protein_coding protein_coding MGP_LPJ_T0011424.1 MGP_LPJ_G0009542.1 mouse_genomes_project 16 20794688 20795002 - Gm23430 misc_RNA misc_RNA MGP_LPJ_T0013185.1 MGP_LPJ_G0011276.1 mouse_genomes_project 16 75956386 75957134 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001006.1 MGP_LPJ_G0000932.1 mouse_genomes_project 16 77561064 77563196 + TEC TEC MGP_LPJ_T0013121.1 MGP_LPJ_G0011212.1 mouse_genomes_project 16 10930180 10931135 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001009.1 MGP_LPJ_G0000935.1 mouse_genomes_project 16 96723478 96724323 + TEC TEC MGP_LPJ_T0045023.1 MGP_LPJ_G0022958.1 mouse_genomes_project 16 93068056 93085269 + MGP_LPJ_P0045023 Smim11 protein_coding protein_coding MGP_LPJ_T0045024.1 MGP_LPJ_G0022958.1 mouse_genomes_project 16 93068066 93083652 + MGP_LPJ_P0045024 Smim11 protein_coding protein_coding MGP_LPJ_T0013189.1 MGP_LPJ_G0011280.1 mouse_genomes_project 16 91584985 91585537 + processed_pseudogene processed_pseudogene MGP_LPJ_T0044168.1 MGP_LPJ_G0022698.1 mouse_genomes_project 16 35091933 35117312 - MGP_LPJ_P0044168 Fbxo40 protein_coding protein_coding MGP_LPJ_T0044169.1 MGP_LPJ_G0022698.1 mouse_genomes_project 16 35094404 35104922 - Fbxo40 protein_coding processed_transcript MGP_LPJ_T0044170.1 MGP_LPJ_G0022698.1 mouse_genomes_project 16 35094513 35100654 - Fbxo40 protein_coding retained_intron MGP_LPJ_T0044171.1 MGP_LPJ_G0022698.1 mouse_genomes_project 16 35094546 35105282 - MGP_LPJ_P0044171 Fbxo40 protein_coding protein_coding MGP_LPJ_T0097995.1 MGP_LPJ_G0036276.1 mouse_genomes_project 16 12770717 12771898 + pseudogene pseudogene MGP_LPJ_T0099165.1 MGP_LPJ_G0037428.1 mouse_genomes_project 16 19452541 19452649 + Gm25810 snRNA snRNA MGP_LPJ_T0043046.1 MGP_LPJ_G0022434.1 mouse_genomes_project 16 10567865 10574342 + MGP_LPJ_P0043046 3110001I22Rik protein_coding protein_coding MGP_LPJ_T0099188.1 MGP_LPJ_G0037451.1 mouse_genomes_project 16 47577837 47577941 - Gm22576 snRNA snRNA MGP_LPJ_T0044422.1 MGP_LPJ_G0022757.1 mouse_genomes_project 16 44174478 44214564 - MGP_LPJ_P0044422 Tmprss7 protein_coding protein_coding MGP_LPJ_T0044423.1 MGP_LPJ_G0022757.1 mouse_genomes_project 16 44174480 44206224 - Tmprss7 protein_coding processed_transcript MGP_LPJ_T0044424.1 MGP_LPJ_G0022757.1 mouse_genomes_project 16 44174504 44210529 - Tmprss7 protein_coding processed_transcript MGP_LPJ_T0044425.1 MGP_LPJ_G0022757.1 mouse_genomes_project 16 44204238 44207342 - Tmprss7 protein_coding processed_transcript MGP_LPJ_T0044426.1 MGP_LPJ_G0022757.1 mouse_genomes_project 16 44204352 44207347 - Tmprss7 protein_coding retained_intron MGP_LPJ_T0044985.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92462898 92606706 + MGP_LPJ_P0044985 Itsn1 protein_coding protein_coding MGP_LPJ_T0044986.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92462970 92608147 + MGP_LPJ_P0044986 Itsn1 protein_coding protein_coding MGP_LPJ_T0044987.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92462970 92653137 + MGP_LPJ_P0044987 Itsn1 protein_coding protein_coding MGP_LPJ_T0044988.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92462970 92659716 + MGP_LPJ_P0044988 Itsn1 protein_coding protein_coding MGP_LPJ_T0044989.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92462987 92568091 + MGP_LPJ_P0044989 Itsn1 protein_coding protein_coding MGP_LPJ_T0044990.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92462988 92608151 + MGP_LPJ_P0044990 Itsn1 protein_coding protein_coding MGP_LPJ_T0044991.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92462990 92608149 + MGP_LPJ_P0044991 Itsn1 protein_coding protein_coding MGP_LPJ_T0044992.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92463083 92518155 + Itsn1 protein_coding retained_intron MGP_LPJ_T0044993.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92463188 92529863 + Itsn1 protein_coding retained_intron MGP_LPJ_T0044994.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92463209 92606993 + MGP_LPJ_P0044994 Itsn1 protein_coding protein_coding MGP_LPJ_T0044995.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92517937 92554450 + MGP_LPJ_P0044995 Itsn1 protein_coding protein_coding MGP_LPJ_T0044996.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92519895 92564055 + Itsn1 protein_coding processed_transcript MGP_LPJ_T0044997.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92540427 92552747 + Itsn1 protein_coding processed_transcript MGP_LPJ_T0044998.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92540441 92548138 + Itsn1 protein_coding retained_intron MGP_LPJ_T0044999.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92552655 92563642 + Itsn1 protein_coding processed_transcript MGP_LPJ_T0045000.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92563281 92564018 + Itsn1 protein_coding retained_intron MGP_LPJ_T0045001.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92575400 92586974 + Itsn1 protein_coding retained_intron MGP_LPJ_T0045002.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92575489 92588918 + MGP_LPJ_P0045002 Itsn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0045003.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92578285 92588918 + MGP_LPJ_P0045003 Itsn1 protein_coding protein_coding MGP_LPJ_T0045004.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92589468 92598982 + MGP_LPJ_P0045004 Itsn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0045005.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92597683 92607843 + Itsn1 protein_coding retained_intron MGP_LPJ_T0045006.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92613963 92632951 + Itsn1 protein_coding processed_transcript MGP_LPJ_T0045007.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92624761 92648485 + MGP_LPJ_P0045007 Itsn1 protein_coding protein_coding MGP_LPJ_T0045008.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92638517 92648508 + MGP_LPJ_P0045008 Itsn1 protein_coding nonsense_mediated_decay MGP_LPJ_T0045009.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92638519 92648485 + MGP_LPJ_P0045009 Itsn1 protein_coding protein_coding MGP_LPJ_T0045010.1 MGP_LPJ_G0022954.1 mouse_genomes_project 16 92651107 92654309 + Itsn1 protein_coding processed_transcript MGP_LPJ_T0101914.1 MGP_LPJ_G0039951.1 mouse_genomes_project 16 94489852 94492162 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0044232.1 MGP_LPJ_G0022716.1 mouse_genomes_project 16 36653298 36660578 - MGP_LPJ_P0044232 Adprh protein_coding protein_coding MGP_LPJ_T0044479.1 MGP_LPJ_G0022774.1 mouse_genomes_project 16 47692620 47839742 + MGP_LPJ_P0044479 Myh15 protein_coding protein_coding MGP_LPJ_T0003683.1 MGP_LPJ_G0003335.1 mouse_genomes_project 16 32933151 32936788 - 1700119H24Rik antisense antisense MGP_LPJ_T0044115.1 MGP_LPJ_G0022687.1 mouse_genomes_project 16 34443156 34472582 - MGP_LPJ_P0044115 2010005H15Rik protein_coding protein_coding MGP_LPJ_T0044116.1 MGP_LPJ_G0022687.1 mouse_genomes_project 16 34443211 34472550 - MGP_LPJ_P0044116 2010005H15Rik protein_coding protein_coding MGP_LPJ_T0043508.1 MGP_LPJ_G0022539.1 mouse_genomes_project 16 17189145 17284193 + MGP_LPJ_P0043508 Yeats2 protein_coding protein_coding MGP_LPJ_T0043509.1 MGP_LPJ_G0022539.1 mouse_genomes_project 16 17189145 17284193 + MGP_LPJ_P0043509 Yeats2 protein_coding protein_coding MGP_LPJ_T0013177.1 MGP_LPJ_G0011268.1 mouse_genomes_project 16 59772336 59773272 + processed_pseudogene processed_pseudogene MGP_LPJ_T0042774.1 MGP_LPJ_G0022363.1 mouse_genomes_project 16 547996 686434 - MGP_LPJ_P0042774 Crebbp protein_coding protein_coding MGP_LPJ_T0042775.1 MGP_LPJ_G0022363.1 mouse_genomes_project 16 550369 685416 - MGP_LPJ_P0042775 Crebbp protein_coding protein_coding MGP_LPJ_T0042776.1 MGP_LPJ_G0022363.1 mouse_genomes_project 16 553278 556376 - Crebbp protein_coding retained_intron MGP_LPJ_T0042777.1 MGP_LPJ_G0022363.1 mouse_genomes_project 16 554433 555228 - Crebbp protein_coding retained_intron MGP_LPJ_T0042778.1 MGP_LPJ_G0022363.1 mouse_genomes_project 16 555012 561263 - MGP_LPJ_P0042778 Crebbp protein_coding protein_coding MGP_LPJ_T0042779.1 MGP_LPJ_G0022363.1 mouse_genomes_project 16 558471 594779 - MGP_LPJ_P0042779 Crebbp protein_coding protein_coding MGP_LPJ_T0042780.1 MGP_LPJ_G0022363.1 mouse_genomes_project 16 558822 562745 - MGP_LPJ_P0042780 Crebbp protein_coding protein_coding MGP_LPJ_T0042781.1 MGP_LPJ_G0022363.1 mouse_genomes_project 16 585408 592760 - MGP_LPJ_P0042781 Crebbp protein_coding protein_coding MGP_LPJ_T0044612.1 MGP_LPJ_G0022814.1 mouse_genomes_project 16 57957587 57958691 - MGP_LPJ_P0044612 Olfr181 protein_coding protein_coding MGP_LPJ_T0044613.1 MGP_LPJ_G0022814.1 mouse_genomes_project 16 57957587 57960679 - MGP_LPJ_P0044613 Olfr181 protein_coding protein_coding MGP_LPJ_T0044614.1 MGP_LPJ_G0022814.1 mouse_genomes_project 16 57958215 57960679 - MGP_LPJ_P0044614 Olfr181 protein_coding protein_coding MGP_LPJ_T0044615.1 MGP_LPJ_G0022814.1 mouse_genomes_project 16 57958363 57960643 - MGP_LPJ_P0044615 Olfr181 protein_coding protein_coding MGP_LPJ_T0043086.1 MGP_LPJ_G0022440.1 mouse_genomes_project 16 10900403 10905399 - MGP_LPJ_P0043086 Ifitm7 protein_coding protein_coding MGP_LPJ_T0043087.1 MGP_LPJ_G0022440.1 mouse_genomes_project 16 10901500 10903323 - MGP_LPJ_P0043087 Ifitm7 protein_coding protein_coding MGP_LPJ_T0044558.1 MGP_LPJ_G0022793.1 mouse_genomes_project 16 55675070 55757714 - MGP_LPJ_P0044558 Adgrg7 protein_coding protein_coding MGP_LPJ_T0100448.1 MGP_LPJ_G0038711.1 mouse_genomes_project 16 73791915 73792050 - Gm22163 snoRNA snoRNA MGP_LPJ_T0044628.1 MGP_LPJ_G0022821.1 mouse_genomes_project 16 58183090 58189114 - MGP_LPJ_P0044628 protein_coding protein_coding MGP_LPJ_T0006846.1 MGP_LPJ_G0005647.1 mouse_genomes_project 16 14155543 14160879 - Gm26635 lincRNA lincRNA MGP_LPJ_T0044265.1 MGP_LPJ_G0022724.1 mouse_genomes_project 16 37034411 37052762 - MGP_LPJ_P0044265 4930435E12Rik protein_coding protein_coding MGP_LPJ_T0044266.1 MGP_LPJ_G0022724.1 mouse_genomes_project 16 37047746 37052744 - 4930435E12Rik protein_coding retained_intron MGP_LPJ_T0044687.1 MGP_LPJ_G0022851.1 mouse_genomes_project 16 66045081 67110008 - MGP_LPJ_P0044687 Cadm2 protein_coding protein_coding MGP_LPJ_T0044688.1 MGP_LPJ_G0022851.1 mouse_genomes_project 16 66052059 67109923 - MGP_LPJ_P0044688 Cadm2 protein_coding protein_coding MGP_LPJ_T0044689.1 MGP_LPJ_G0022851.1 mouse_genomes_project 16 66052504 67110008 - MGP_LPJ_P0044689 Cadm2 protein_coding protein_coding MGP_LPJ_T0044690.1 MGP_LPJ_G0022851.1 mouse_genomes_project 16 66053407 66381913 - MGP_LPJ_P0044690 Cadm2 protein_coding protein_coding MGP_LPJ_T0044691.1 MGP_LPJ_G0022851.1 mouse_genomes_project 16 66201541 67109593 - MGP_LPJ_P0044691 Cadm2 protein_coding protein_coding MGP_LPJ_T0044692.1 MGP_LPJ_G0022851.1 mouse_genomes_project 16 66229034 66350377 - Cadm2 protein_coding processed_transcript MGP_LPJ_T0044179.1 MGP_LPJ_G0022700.1 mouse_genomes_project 16 35255852 35541330 - MGP_LPJ_P0044179 protein_coding protein_coding MGP_LPJ_T0044180.1 MGP_LPJ_G0022700.1 mouse_genomes_project 16 35256178 35541330 - MGP_LPJ_P0044180 protein_coding protein_coding MGP_LPJ_T0044181.1 MGP_LPJ_G0022700.1 mouse_genomes_project 16 35256566 35541369 - MGP_LPJ_P0044181 protein_coding protein_coding MGP_LPJ_T0044182.1 MGP_LPJ_G0022700.1 mouse_genomes_project 16 35256566 35541365 - MGP_LPJ_P0044182 protein_coding protein_coding MGP_LPJ_T0044183.1 MGP_LPJ_G0022700.1 mouse_genomes_project 16 35275140 35541330 - MGP_LPJ_P0044183 protein_coding protein_coding MGP_LPJ_T0044184.1 MGP_LPJ_G0022700.1 mouse_genomes_project 16 35298899 35346762 - protein_coding processed_transcript MGP_LPJ_T0044185.1 MGP_LPJ_G0022700.1 mouse_genomes_project 16 35356538 35541330 - MGP_LPJ_P0044185 protein_coding protein_coding MGP_LPJ_T0044186.1 MGP_LPJ_G0022700.1 mouse_genomes_project 16 35476582 35541330 - protein_coding retained_intron MGP_LPJ_T0044187.1 MGP_LPJ_G0022700.1 mouse_genomes_project 16 35529290 35541365 - protein_coding processed_transcript MGP_LPJ_T0044188.1 MGP_LPJ_G0022700.1 mouse_genomes_project 16 35539277 35541330 - protein_coding retained_intron MGP_LPJ_T0043343.1 MGP_LPJ_G0022492.1 mouse_genomes_project 16 14793722 14861963 - MGP_LPJ_P0043343 Gm20518 protein_coding nonsense_mediated_decay MGP_LPJ_T0043114.1 MGP_LPJ_G0022447.1 mouse_genomes_project 16 11454414 11461506 + MGP_LPJ_P0043114 Gm1758 protein_coding protein_coding MGP_LPJ_T0044322.1 MGP_LPJ_G0022735.1 mouse_genomes_project 16 42526082 42583829 - MGP_LPJ_P0044322 Atp6v1a protein_coding protein_coding MGP_LPJ_T0044323.1 MGP_LPJ_G0022735.1 mouse_genomes_project 16 42526325 42583720 - MGP_LPJ_P0044323 Atp6v1a protein_coding protein_coding MGP_LPJ_T0044324.1 MGP_LPJ_G0022735.1 mouse_genomes_project 16 42539217 42583504 - Atp6v1a protein_coding retained_intron MGP_LPJ_T0044325.1 MGP_LPJ_G0022735.1 mouse_genomes_project 16 42552129 42584154 - MGP_LPJ_P0044325 Atp6v1a protein_coding protein_coding MGP_LPJ_T0044326.1 MGP_LPJ_G0022735.1 mouse_genomes_project 16 42552252 42583542 - MGP_LPJ_P0044326 Atp6v1a protein_coding protein_coding MGP_LPJ_T0044327.1 MGP_LPJ_G0022735.1 mouse_genomes_project 16 42554690 42584229 - MGP_LPJ_P0044327 Atp6v1a protein_coding protein_coding MGP_LPJ_T0044421.1 MGP_LPJ_G0022756.1 mouse_genomes_project 16 44145166 44172280 - MGP_LPJ_P0044421 BC016579 protein_coding protein_coding MGP_LPJ_T0100446.1 MGP_LPJ_G0038709.1 mouse_genomes_project 16 67965743 67965850 - Gm24681 snoRNA snoRNA MGP_LPJ_T0003677.1 MGP_LPJ_G0003331.1 mouse_genomes_project 16 30690696 30694416 + Gm26769 antisense antisense MGP_LPJ_T0043122.1 MGP_LPJ_G0022453.1 mouse_genomes_project 16 12501938 12546667 + Prkdc protein_coding retained_intron MGP_LPJ_T0043123.1 MGP_LPJ_G0022453.1 mouse_genomes_project 16 12501961 12717630 + MGP_LPJ_P0043123 Prkdc protein_coding protein_coding MGP_LPJ_T0044546.1 MGP_LPJ_G0022791.1 mouse_genomes_project 16 55415365 55640283 + MGP_LPJ_P0044546 Abi3bp protein_coding protein_coding MGP_LPJ_T0044547.1 MGP_LPJ_G0022791.1 mouse_genomes_project 16 55415365 55640283 + MGP_LPJ_P0044547 Abi3bp protein_coding protein_coding MGP_LPJ_T0044548.1 MGP_LPJ_G0022791.1 mouse_genomes_project 16 55415365 55640283 + MGP_LPJ_P0044548 Abi3bp protein_coding protein_coding MGP_LPJ_T0044549.1 MGP_LPJ_G0022791.1 mouse_genomes_project 16 55415365 55640283 + MGP_LPJ_P0044549 Abi3bp protein_coding protein_coding MGP_LPJ_T0044550.1 MGP_LPJ_G0022791.1 mouse_genomes_project 16 55415433 55639197 + MGP_LPJ_P0044550 Abi3bp protein_coding unknown_likely_coding MGP_LPJ_T0003676.1 MGP_LPJ_G0003330.1 mouse_genomes_project 16 30512169 30515144 - Tnk2os antisense antisense MGP_LPJ_T0097998.1 MGP_LPJ_G0036279.1 mouse_genomes_project 16 48590195 48591994 + pseudogene pseudogene MGP_LPJ_T0044336.1 MGP_LPJ_G0022738.1 mouse_genomes_project 16 42693135 42794769 - MGP_LPJ_P0044336 Sidt1 protein_coding protein_coding MGP_LPJ_T0044337.1 MGP_LPJ_G0022738.1 mouse_genomes_project 16 42694247 42794101 - MGP_LPJ_P0044337 Sidt1 protein_coding protein_coding MGP_LPJ_T0044338.1 MGP_LPJ_G0022738.1 mouse_genomes_project 16 42730056 42740800 - Sidt1 protein_coding retained_intron MGP_LPJ_T0044339.1 MGP_LPJ_G0022738.1 mouse_genomes_project 16 42740359 42741459 - MGP_LPJ_P0044339 Sidt1 protein_coding protein_coding MGP_LPJ_T0044340.1 MGP_LPJ_G0022738.1 mouse_genomes_project 16 42743210 42794114 - Sidt1 protein_coding processed_transcript MGP_LPJ_T0045181.1 MGP_LPJ_G0022987.1 mouse_genomes_project 16 97202648 97234868 + MGP_LPJ_P0045181 Sh3bgr protein_coding protein_coding MGP_LPJ_T0045182.1 MGP_LPJ_G0022987.1 mouse_genomes_project 16 97202849 97230638 + MGP_LPJ_P0045182 Sh3bgr protein_coding protein_coding MGP_LPJ_T0045183.1 MGP_LPJ_G0022987.1 mouse_genomes_project 16 97202849 97234863 + MGP_LPJ_P0045183 Sh3bgr protein_coding protein_coding MGP_LPJ_T0045184.1 MGP_LPJ_G0022987.1 mouse_genomes_project 16 97202882 97226178 + MGP_LPJ_P0045184 Sh3bgr protein_coding protein_coding MGP_LPJ_T0045185.1 MGP_LPJ_G0022987.1 mouse_genomes_project 16 97202907 97230669 + MGP_LPJ_P0045185 Sh3bgr protein_coding protein_coding MGP_LPJ_T0045186.1 MGP_LPJ_G0022987.1 mouse_genomes_project 16 97211348 97226178 + MGP_LPJ_P0045186 Sh3bgr protein_coding protein_coding MGP_LPJ_T0045187.1 MGP_LPJ_G0022987.1 mouse_genomes_project 16 97212268 97230641 + MGP_LPJ_P0045187 Sh3bgr protein_coding protein_coding MGP_LPJ_T0045188.1 MGP_LPJ_G0022987.1 mouse_genomes_project 16 97226085 97234860 + MGP_LPJ_P0045188 Sh3bgr protein_coding protein_coding MGP_LPJ_T0013116.1 MGP_LPJ_G0011207.1 mouse_genomes_project 16 7836526 7837029 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006901.1 MGP_LPJ_G0005687.1 mouse_genomes_project 16 96869047 96870378 + Gm15340 lincRNA lincRNA MGP_LPJ_T0045030.1 MGP_LPJ_G0022962.1 mouse_genomes_project 16 93266309 93311358 + MGP_LPJ_P0045030 Clic6 protein_coding protein_coding MGP_LPJ_T0045031.1 MGP_LPJ_G0022962.1 mouse_genomes_project 16 93279852 93323822 + MGP_LPJ_P0045031 Clic6 protein_coding protein_coding MGP_LPJ_T0101904.1 MGP_LPJ_G0039941.1 mouse_genomes_project 16 73649 74583 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013108.1 MGP_LPJ_G0011199.1 mouse_genomes_project 16 798687 799012 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099164.1 MGP_LPJ_G0037427.1 mouse_genomes_project 16 18961616 18961722 + Gm24898 snRNA snRNA MGP_LPJ_T0043453.1 MGP_LPJ_G0022517.1 mouse_genomes_project 16 15615876 15623990 - MGP_LPJ_P0043453 Sept5 protein_coding protein_coding MGP_LPJ_T0003673.1 MGP_LPJ_G0003328.1 mouse_genomes_project 16 29197616 29198032 - Gm15743 antisense antisense MGP_LPJ_T0003674.1 MGP_LPJ_G0003328.1 mouse_genomes_project 16 29197616 29199517 - Gm15743 antisense antisense MGP_LPJ_T0003660.1 MGP_LPJ_G0003316.1 mouse_genomes_project 16 7440153 7454334 - Gm15558 antisense antisense MGP_LPJ_T0043742.1 MGP_LPJ_G0022589.1 mouse_genomes_project 16 21332785 21340862 - MGP_LPJ_P0043742 Rtp2 protein_coding protein_coding MGP_LPJ_T0044830.1 MGP_LPJ_G0022904.1 mouse_genomes_project 16 89397810 89398114 - MGP_LPJ_P0044830 Krtap19-4 protein_coding protein_coding MGP_LPJ_T0010170.1 MGP_LPJ_G0008288.1 mouse_genomes_project 16 77468431 77468496 + Mir99a miRNA miRNA MGP_LPJ_T0101907.1 MGP_LPJ_G0039944.1 mouse_genomes_project 16 13564031 13564152 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013120.1 MGP_LPJ_G0011211.1 mouse_genomes_project 16 9627971 9629306 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003687.1 MGP_LPJ_G0003337.1 mouse_genomes_project 16 34423535 34444170 + Gm15845 antisense antisense MGP_LPJ_T0006862.1 MGP_LPJ_G0005661.1 mouse_genomes_project 16 33550830 33558865 - 1600019K03Rik lincRNA lincRNA MGP_LPJ_T0044267.1 MGP_LPJ_G0022725.1 mouse_genomes_project 16 37108411 37243935 + MGP_LPJ_P0044267 Igsf11 protein_coding protein_coding MGP_LPJ_T0044268.1 MGP_LPJ_G0022725.1 mouse_genomes_project 16 37222319 37243811 + MGP_LPJ_P0044268 Igsf11 protein_coding protein_coding MGP_LPJ_T0003665.1 MGP_LPJ_G0003320.1 mouse_genomes_project 16 11252506 11254680 + Gm15868 antisense antisense MGP_LPJ_T0017464.1 MGP_LPJ_G0015242.1 mouse_genomes_project 16 91686574 91691832 + 4930404I05Rik processed_transcript processed_transcript MGP_LPJ_T0017465.1 MGP_LPJ_G0015242.1 mouse_genomes_project 16 91689043 91692072 + 4930404I05Rik processed_transcript processed_transcript MGP_LPJ_T0044780.1 MGP_LPJ_G0022880.1 mouse_genomes_project 16 87779225 87836910 - MGP_LPJ_P0044780 Ltn1 protein_coding protein_coding MGP_LPJ_T0044123.1 MGP_LPJ_G0022691.1 mouse_genomes_project 16 34720586 34785277 - MGP_LPJ_P0044123 Cd86 protein_coding protein_coding MGP_LPJ_T0044124.1 MGP_LPJ_G0022691.1 mouse_genomes_project 16 34720614 34721237 - Cd86 protein_coding processed_transcript MGP_LPJ_T0044125.1 MGP_LPJ_G0022691.1 mouse_genomes_project 16 34738802 34760889 - MGP_LPJ_P0044125 Cd86 protein_coding protein_coding MGP_LPJ_T0044126.1 MGP_LPJ_G0022691.1 mouse_genomes_project 16 34780013 34785281 - Cd86 protein_coding processed_transcript MGP_LPJ_T0044570.1 MGP_LPJ_G0022800.1 mouse_genomes_project 16 56263836 56562017 - MGP_LPJ_P0044570 Cmss1 protein_coding protein_coding MGP_LPJ_T0044639.1 MGP_LPJ_G0022832.1 mouse_genomes_project 16 58442482 58444313 - MGP_LPJ_P0044639 Olfr209 protein_coding protein_coding MGP_LPJ_T0003709.1 MGP_LPJ_G0003355.1 mouse_genomes_project 16 97086063 97105713 + Gm15341 antisense antisense MGP_LPJ_T0045205.1 MGP_LPJ_G0022993.1 mouse_genomes_project 16 98438995 98522590 + MGP_LPJ_P0045205 Bace2 protein_coding protein_coding MGP_LPJ_T0010129.1 MGP_LPJ_G0008247.1 mouse_genomes_project 16 11053028 11053094 - Gm27671 miRNA miRNA MGP_LPJ_T0001000.1 MGP_LPJ_G0000926.1 mouse_genomes_project 16 77350850 77351373 + TEC TEC MGP_LPJ_T0043380.1 MGP_LPJ_G0022505.1 mouse_genomes_project 16 15211782 15226264 - MGP_LPJ_P0043380 Zdhhc8 protein_coding protein_coding MGP_LPJ_T0010124.1 MGP_LPJ_G0008242.1 mouse_genomes_project 16 8067284 8067362 - Mir1945 miRNA miRNA MGP_LPJ_T0010180.1 MGP_LPJ_G0008298.1 mouse_genomes_project 16 95062681 95062791 - Gm23062 miRNA miRNA MGP_LPJ_T0044770.1 MGP_LPJ_G0022875.1 mouse_genomes_project 16 85225008 85479769 - MGP_LPJ_P0044770 App protein_coding protein_coding MGP_LPJ_T0045050.1 MGP_LPJ_G0022968.1 mouse_genomes_project 16 94705568 94749623 + MGP_LPJ_P0045050 Morc3 protein_coding protein_coding MGP_LPJ_T0045051.1 MGP_LPJ_G0022968.1 mouse_genomes_project 16 94705568 94749620 + MGP_LPJ_P0045051 Morc3 protein_coding protein_coding MGP_LPJ_T0045052.1 MGP_LPJ_G0022968.1 mouse_genomes_project 16 94705682 94718310 + Morc3 protein_coding retained_intron MGP_LPJ_T0045053.1 MGP_LPJ_G0022968.1 mouse_genomes_project 16 94705704 94748578 + MGP_LPJ_P0045053 Morc3 protein_coding protein_coding MGP_LPJ_T0045054.1 MGP_LPJ_G0022968.1 mouse_genomes_project 16 94705710 94734063 + MGP_LPJ_P0045054 Morc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0045055.1 MGP_LPJ_G0022968.1 mouse_genomes_project 16 94718192 94722793 + Morc3 protein_coding processed_transcript MGP_LPJ_T0045056.1 MGP_LPJ_G0022968.1 mouse_genomes_project 16 94727348 94729498 + Morc3 protein_coding retained_intron MGP_LPJ_T0045226.1 MGP_LPJ_G0022999.1 mouse_genomes_project 16 98960347 99027563 - MGP_LPJ_P0045226 C2cd2 protein_coding protein_coding MGP_LPJ_T0100426.1 MGP_LPJ_G0038689.1 mouse_genomes_project 16 29875951 29876084 + Gm26419 snoRNA snoRNA MGP_LPJ_T0013164.1 MGP_LPJ_G0011255.1 mouse_genomes_project 16 41351240 41351629 + processed_pseudogene processed_pseudogene MGP_LPJ_T0042720.1 MGP_LPJ_G0022354.1 mouse_genomes_project 16 310925 318429 - Zfp597 protein_coding processed_transcript MGP_LPJ_T0042721.1 MGP_LPJ_G0022354.1 mouse_genomes_project 16 314132 325511 - MGP_LPJ_P0042721 Zfp597 protein_coding protein_coding MGP_LPJ_T0042722.1 MGP_LPJ_G0022354.1 mouse_genomes_project 16 314988 337397 - Zfp597 protein_coding processed_transcript MGP_LPJ_T0042723.1 MGP_LPJ_G0022354.1 mouse_genomes_project 16 317894 337453 - Zfp597 protein_coding processed_transcript MGP_LPJ_T0042724.1 MGP_LPJ_G0022354.1 mouse_genomes_project 16 319193 324848 - Zfp597 protein_coding retained_intron MGP_LPJ_T0100436.1 MGP_LPJ_G0038699.1 mouse_genomes_project 16 50847580 50847713 - Gm23513 snoRNA snoRNA MGP_LPJ_T0017444.1 MGP_LPJ_G0015238.1 mouse_genomes_project 16 58648001 58693580 - Crybg3 processed_transcript processed_transcript MGP_LPJ_T0045176.1 MGP_LPJ_G0022986.1 mouse_genomes_project 16 97155507 97194438 - MGP_LPJ_P0045176 Lca5l protein_coding protein_coding MGP_LPJ_T0045177.1 MGP_LPJ_G0022986.1 mouse_genomes_project 16 97156006 97180514 - MGP_LPJ_P0045177 Lca5l protein_coding unknown_likely_coding MGP_LPJ_T0045178.1 MGP_LPJ_G0022986.1 mouse_genomes_project 16 97156168 97194445 - MGP_LPJ_P0045178 Lca5l protein_coding protein_coding MGP_LPJ_T0045179.1 MGP_LPJ_G0022986.1 mouse_genomes_project 16 97157599 97194438 - Lca5l protein_coding retained_intron MGP_LPJ_T0045180.1 MGP_LPJ_G0022986.1 mouse_genomes_project 16 97181797 97194445 - Lca5l protein_coding processed_transcript MGP_LPJ_T0044823.1 MGP_LPJ_G0022899.1 mouse_genomes_project 16 89317225 89324382 - MGP_LPJ_P0044823 Krtap14 protein_coding protein_coding MGP_LPJ_T0044825.1 MGP_LPJ_G0022899.1 mouse_genomes_project 16 89323849 89324705 - MGP_LPJ_P0044825 Krtap14 protein_coding protein_coding MGP_LPJ_T0006859.1 MGP_LPJ_G0005658.1 mouse_genomes_project 16 27891113 27896245 + 1700025H01Rik lincRNA lincRNA MGP_LPJ_T0042790.1 MGP_LPJ_G0022366.1 mouse_genomes_project 16 1034210 1048961 - MGP_LPJ_P0042790 Tfap4 protein_coding protein_coding MGP_LPJ_T0043757.1 MGP_LPJ_G0022594.1 mouse_genomes_project 16 23451764 23611268 - MGP_LPJ_P0043757 P3h2 protein_coding protein_coding MGP_LPJ_T0043758.1 MGP_LPJ_G0022594.1 mouse_genomes_project 16 23464754 23480780 - P3h2 protein_coding retained_intron MGP_LPJ_T0043759.1 MGP_LPJ_G0022594.1 mouse_genomes_project 16 23481109 23488397 - P3h2 protein_coding processed_transcript MGP_LPJ_T0043760.1 MGP_LPJ_G0022594.1 mouse_genomes_project 16 23492766 23510423 - P3h2 protein_coding processed_transcript MGP_LPJ_T0013114.1 MGP_LPJ_G0011205.1 mouse_genomes_project 16 6767560 6768326 + processed_pseudogene processed_pseudogene MGP_LPJ_T0043887.1 MGP_LPJ_G0022628.1 mouse_genomes_project 16 29756807 29801926 - MGP_LPJ_P0043887 Senp5 protein_coding protein_coding MGP_LPJ_T0043888.1 MGP_LPJ_G0022628.1 mouse_genomes_project 16 29757819 29783053 - MGP_LPJ_P0043888 Senp5 protein_coding nonsense_mediated_decay MGP_LPJ_T0043889.1 MGP_LPJ_G0022628.1 mouse_genomes_project 16 29769770 29784229 - MGP_LPJ_P0043889 Senp5 protein_coding protein_coding MGP_LPJ_T0043890.1 MGP_LPJ_G0022628.1 mouse_genomes_project 16 29770906 29801817 - Senp5 protein_coding retained_intron MGP_LPJ_T0045080.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95273973 95375351 + MGP_LPJ_P0045080 Ttc3 protein_coding protein_coding MGP_LPJ_T0045081.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95274094 95348919 + MGP_LPJ_P0045081 Ttc3 protein_coding protein_coding MGP_LPJ_T0045082.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95274098 95308817 + Ttc3 protein_coding retained_intron MGP_LPJ_T0045083.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95274098 95339242 + MGP_LPJ_P0045083 Ttc3 protein_coding protein_coding MGP_LPJ_T0045084.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95274101 95348924 + MGP_LPJ_P0045084 Ttc3 protein_coding protein_coding MGP_LPJ_T0045085.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95274104 95323671 + MGP_LPJ_P0045085 Ttc3 protein_coding protein_coding MGP_LPJ_T0045086.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95274105 95300240 + MGP_LPJ_P0045086 Ttc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0045087.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95274106 95321339 + Ttc3 protein_coding processed_transcript MGP_LPJ_T0045088.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95274106 95327274 + MGP_LPJ_P0045088 Ttc3 protein_coding protein_coding MGP_LPJ_T0045089.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95274106 95323599 + MGP_LPJ_P0045089 Ttc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0045090.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95274112 95348931 + MGP_LPJ_P0045090 Ttc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0045091.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95274122 95314699 + Ttc3 protein_coding processed_transcript MGP_LPJ_T0045092.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95274122 95290539 + MGP_LPJ_P0045092 Ttc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0045093.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95274122 95294321 + MGP_LPJ_P0045093 Ttc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0045094.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95274122 95348921 + MGP_LPJ_P0045094 Ttc3 protein_coding protein_coding MGP_LPJ_T0045095.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95274135 95320937 + MGP_LPJ_P0045095 Ttc3 protein_coding protein_coding MGP_LPJ_T0045096.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95274136 95348931 + MGP_LPJ_P0045096 Ttc3 protein_coding protein_coding MGP_LPJ_T0045097.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95274136 95348931 + MGP_LPJ_P0045097 Ttc3 protein_coding protein_coding MGP_LPJ_T0045098.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95274151 95332863 + MGP_LPJ_P0045098 Ttc3 protein_coding protein_coding MGP_LPJ_T0045099.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95274152 95315844 + MGP_LPJ_P0045099 Ttc3 protein_coding protein_coding MGP_LPJ_T0045100.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95274152 95308346 + MGP_LPJ_P0045100 Ttc3 protein_coding protein_coding MGP_LPJ_T0045101.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95274153 95317112 + Ttc3 protein_coding processed_transcript MGP_LPJ_T0045102.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95274153 95300484 + MGP_LPJ_P0045102 Ttc3 protein_coding protein_coding MGP_LPJ_T0045103.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95274178 95325258 + MGP_LPJ_P0045103 Ttc3 protein_coding protein_coding MGP_LPJ_T0045104.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95330124 95338050 + MGP_LPJ_P0045104 Ttc3 protein_coding protein_coding MGP_LPJ_T0045105.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95346349 95354991 + Ttc3 protein_coding retained_intron MGP_LPJ_T0045106.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95357383 95366347 + MGP_LPJ_P0045106 Ttc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0045107.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95363665 95374123 + Ttc3 protein_coding retained_intron MGP_LPJ_T0045108.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95371427 95375014 + Ttc3 protein_coding retained_intron MGP_LPJ_T0045109.1 MGP_LPJ_G0022975.1 mouse_genomes_project 16 95372722 95374346 + Ttc3 protein_coding retained_intron MGP_LPJ_T0042750.1 MGP_LPJ_G0022360.1 mouse_genomes_project 16 436631 446633 - MGP_LPJ_P0042750 Slx4 protein_coding nonsense_mediated_decay MGP_LPJ_T0042751.1 MGP_LPJ_G0022360.1 mouse_genomes_project 16 436649 461918 - MGP_LPJ_P0042751 Slx4 protein_coding protein_coding MGP_LPJ_T0042752.1 MGP_LPJ_G0022360.1 mouse_genomes_project 16 436650 453199 - MGP_LPJ_P0042752 Slx4 protein_coding nonsense_mediated_decay MGP_LPJ_T0042753.1 MGP_LPJ_G0022360.1 mouse_genomes_project 16 436654 443046 - Slx4 protein_coding retained_intron MGP_LPJ_T0042754.1 MGP_LPJ_G0022360.1 mouse_genomes_project 16 436659 439731 - Slx4 protein_coding retained_intron MGP_LPJ_T0042755.1 MGP_LPJ_G0022360.1 mouse_genomes_project 16 437347 463824 - MGP_LPJ_P0042755 Slx4 protein_coding unknown_likely_coding MGP_LPJ_T0042756.1 MGP_LPJ_G0022360.1 mouse_genomes_project 16 452248 461490 - MGP_LPJ_P0042756 Slx4 protein_coding protein_coding MGP_LPJ_T0042757.1 MGP_LPJ_G0022360.1 mouse_genomes_project 16 461240 464008 - MGP_LPJ_P0042757 Slx4 protein_coding protein_coding MGP_LPJ_T0042758.1 MGP_LPJ_G0022360.1 mouse_genomes_project 16 461438 463990 - MGP_LPJ_P0042758 Slx4 protein_coding protein_coding MGP_LPJ_T0098187.1 MGP_LPJ_G0036468.1 mouse_genomes_project 16 30904570 30904689 + n-R5s33 rRNA rRNA MGP_LPJ_T0045048.1 MGP_LPJ_G0022967.1 mouse_genomes_project 16 94576442 94681304 + MGP_LPJ_P0045048 Dopey2 protein_coding protein_coding MGP_LPJ_T0045049.1 MGP_LPJ_G0022967.1 mouse_genomes_project 16 94576573 94681307 + MGP_LPJ_P0045049 Dopey2 protein_coding unknown_likely_coding MGP_LPJ_T0042971.1 MGP_LPJ_G0022415.1 mouse_genomes_project 16 7571056 7571782 - MGP_LPJ_P0042971 Prm2 protein_coding protein_coding MGP_LPJ_T0042972.1 MGP_LPJ_G0022415.1 mouse_genomes_project 16 7571213 7575811 - MGP_LPJ_P0042972 Prm2 protein_coding protein_coding MGP_LPJ_T0013184.1 MGP_LPJ_G0011275.1 mouse_genomes_project 16 75586587 75587500 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010121.1 MGP_LPJ_G0008239.1 mouse_genomes_project 16 5263076 5263184 - Gm26445 miRNA miRNA MGP_LPJ_T0043483.1 MGP_LPJ_G0022525.1 mouse_genomes_project 16 16314763 16315858 - MGP_LPJ_P0043483 Olfr164 protein_coding protein_coding MGP_LPJ_T0045057.1 MGP_LPJ_G0022969.1 mouse_genomes_project 16 94758848 94781017 + MGP_LPJ_P0045057 Chaf1b protein_coding protein_coding MGP_LPJ_T0045058.1 MGP_LPJ_G0022969.1 mouse_genomes_project 16 94758871 94780979 + MGP_LPJ_P0045058 Chaf1b protein_coding protein_coding MGP_LPJ_T0045059.1 MGP_LPJ_G0022969.1 mouse_genomes_project 16 94758878 94769234 + Chaf1b protein_coding retained_intron MGP_LPJ_T0045060.1 MGP_LPJ_G0022969.1 mouse_genomes_project 16 94758963 94760419 + MGP_LPJ_P0045060 Chaf1b protein_coding protein_coding MGP_LPJ_T0045061.1 MGP_LPJ_G0022969.1 mouse_genomes_project 16 94759149 94762100 + MGP_LPJ_P0045061 Chaf1b protein_coding protein_coding MGP_LPJ_T0045062.1 MGP_LPJ_G0022969.1 mouse_genomes_project 16 94761657 94767735 + Chaf1b protein_coding processed_transcript MGP_LPJ_T0045063.1 MGP_LPJ_G0022969.1 mouse_genomes_project 16 94767686 94775031 + Chaf1b protein_coding retained_intron MGP_LPJ_T0045064.1 MGP_LPJ_G0022969.1 mouse_genomes_project 16 94779594 94781012 + Chaf1b protein_coding retained_intron MGP_LPJ_T0006863.1 MGP_LPJ_G0005662.1 mouse_genomes_project 16 33880109 33883106 - Gm26838 lincRNA lincRNA MGP_LPJ_T0044732.1 MGP_LPJ_G0022862.1 mouse_genomes_project 16 76872857 76985347 + MGP_LPJ_P0044732 Usp25 protein_coding protein_coding MGP_LPJ_T0042904.1 MGP_LPJ_G0022396.1 mouse_genomes_project 16 5275173 5279003 - MGP_LPJ_P0042904 Tmem186 protein_coding protein_coding MGP_LPJ_T0099197.1 MGP_LPJ_G0037460.1 mouse_genomes_project 16 78521082 78521189 + Gm24861 snRNA snRNA MGP_LPJ_T0044496.1 MGP_LPJ_G0022778.1 mouse_genomes_project 16 49299342 49300638 - MGP_LPJ_P0044496 Ccdc54 protein_coding protein_coding MGP_LPJ_T0006892.1 MGP_LPJ_G0005681.1 mouse_genomes_project 16 91378090 91379701 + Gm17518 lincRNA lincRNA MGP_LPJ_T0013167.1 MGP_LPJ_G0011258.1 mouse_genomes_project 16 43719144 43719546 + processed_pseudogene processed_pseudogene MGP_LPJ_T0042725.1 MGP_LPJ_G0022355.1 mouse_genomes_project 16 325489 354256 + MGP_LPJ_P0042725 Naa60 protein_coding protein_coding MGP_LPJ_T0042727.1 MGP_LPJ_G0022355.1 mouse_genomes_project 16 337559 350793 + MGP_LPJ_P0042727 Naa60 protein_coding nonsense_mediated_decay MGP_LPJ_T0042728.1 MGP_LPJ_G0022355.1 mouse_genomes_project 16 337574 357194 + MGP_LPJ_P0042728 Naa60 protein_coding nonsense_mediated_decay MGP_LPJ_T0042729.1 MGP_LPJ_G0022355.1 mouse_genomes_project 16 337577 350824 + MGP_LPJ_P0042729 Naa60 protein_coding nonsense_mediated_decay MGP_LPJ_T0042730.1 MGP_LPJ_G0022355.1 mouse_genomes_project 16 337588 358218 + MGP_LPJ_P0042730 Naa60 protein_coding protein_coding MGP_LPJ_T0042731.1 MGP_LPJ_G0022355.1 mouse_genomes_project 16 337604 353845 + Naa60 protein_coding retained_intron MGP_LPJ_T0042732.1 MGP_LPJ_G0022355.1 mouse_genomes_project 16 347819 355384 + MGP_LPJ_P0042732 Naa60 protein_coding protein_coding MGP_LPJ_T0042733.1 MGP_LPJ_G0022355.1 mouse_genomes_project 16 347819 355259 + MGP_LPJ_P0042733 Naa60 protein_coding protein_coding MGP_LPJ_T0010167.1 MGP_LPJ_G0008285.1 mouse_genomes_project 16 73704175 73704273 + Gm24272 miRNA miRNA MGP_LPJ_T0013141.1 MGP_LPJ_G0011232.1 mouse_genomes_project 16 17735718 17736210 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006898.1 MGP_LPJ_G0005685.1 mouse_genomes_project 16 96764499 96766788 - 2810404F17Rik lincRNA lincRNA MGP_LPJ_T0003659.1 MGP_LPJ_G0003315.1 mouse_genomes_project 16 1520799 1527131 + Gm42477 antisense antisense MGP_LPJ_T0042888.1 MGP_LPJ_G0022392.1 mouse_genomes_project 16 3393462 4037471 + MGP_LPJ_P0042888 Rbfox1 protein_coding protein_coding MGP_LPJ_T0042889.1 MGP_LPJ_G0022392.1 mouse_genomes_project 16 3682963 4040146 + MGP_LPJ_P0042889 Rbfox1 protein_coding protein_coding MGP_LPJ_T0042890.1 MGP_LPJ_G0022392.1 mouse_genomes_project 16 3835452 4036213 + MGP_LPJ_P0042890 Rbfox1 protein_coding unknown_likely_coding MGP_LPJ_T0011820.1 MGP_LPJ_G0009933.1 mouse_genomes_project 16 58152440 58153343 - MGP_LPJ_P0011820 polymorphic_pseudogene polymorphic_pseudogene MGP_LPJ_T0044726.1 MGP_LPJ_G0022861.1 mouse_genomes_project 16 76113585 76202088 - MGP_LPJ_P0044726 Nrip1 protein_coding protein_coding MGP_LPJ_T0044727.1 MGP_LPJ_G0022861.1 mouse_genomes_project 16 76117048 76201309 - MGP_LPJ_P0044727 Nrip1 protein_coding protein_coding MGP_LPJ_T0044728.1 MGP_LPJ_G0022861.1 mouse_genomes_project 16 76120832 76151012 - MGP_LPJ_P0044728 Nrip1 protein_coding protein_coding MGP_LPJ_T0044729.1 MGP_LPJ_G0022861.1 mouse_genomes_project 16 76155567 76201297 - Nrip1 protein_coding retained_intron MGP_LPJ_T0044730.1 MGP_LPJ_G0022861.1 mouse_genomes_project 16 76155779 76201300 - Nrip1 protein_coding retained_intron MGP_LPJ_T0044731.1 MGP_LPJ_G0022861.1 mouse_genomes_project 16 76178833 76201309 - Nrip1 protein_coding retained_intron MGP_LPJ_T0011428.1 MGP_LPJ_G0009546.1 mouse_genomes_project 16 46189035 46189349 - Gm25318 misc_RNA misc_RNA MGP_LPJ_T0100438.1 MGP_LPJ_G0038701.1 mouse_genomes_project 16 52227036 52227144 - Gm22459 snoRNA snoRNA MGP_LPJ_T0003664.1 MGP_LPJ_G0003319.1 mouse_genomes_project 16 10628022 10637886 + Pla2g10os antisense antisense MGP_LPJ_T0044195.1 MGP_LPJ_G0022703.1 mouse_genomes_project 16 35743939 35797173 + MGP_LPJ_P0044195 Hgd protein_coding protein_coding MGP_LPJ_T0044196.1 MGP_LPJ_G0022703.1 mouse_genomes_project 16 35744036 35797173 + Hgd protein_coding processed_transcript MGP_LPJ_T0044197.1 MGP_LPJ_G0022703.1 mouse_genomes_project 16 35744040 35777258 + Hgd protein_coding retained_intron MGP_LPJ_T0044198.1 MGP_LPJ_G0022703.1 mouse_genomes_project 16 35744068 35781420 + Hgd protein_coding processed_transcript MGP_LPJ_T0044199.1 MGP_LPJ_G0022703.1 mouse_genomes_project 16 35787005 35797173 + Hgd protein_coding processed_transcript MGP_LPJ_T0044616.1 MGP_LPJ_G0022815.1 mouse_genomes_project 16 58017294 58022626 + MGP_LPJ_P0044616 Olfr183 protein_coding protein_coding MGP_LPJ_T0044617.1 MGP_LPJ_G0022815.1 mouse_genomes_project 16 58017313 58022162 + MGP_LPJ_P0044617 Olfr183 protein_coding protein_coding MGP_LPJ_T0044831.1 MGP_LPJ_G0022905.1 mouse_genomes_project 16 89409084 89409567 - MGP_LPJ_P0044831 Krtap19-5 protein_coding protein_coding MGP_LPJ_T0003692.1 MGP_LPJ_G0003342.1 mouse_genomes_project 16 39721023 39739925 - Gm28750 antisense antisense MGP_LPJ_T0044667.1 MGP_LPJ_G0022840.1 mouse_genomes_project 16 62071206 62080856 + MGP_LPJ_P0044667 Stx19 protein_coding protein_coding MGP_LPJ_T0043044.1 MGP_LPJ_G0022432.1 mouse_genomes_project 16 10429863 10564107 - MGP_LPJ_P0043044 Parn protein_coding protein_coding MGP_LPJ_T0043131.1 MGP_LPJ_G0022457.1 mouse_genomes_project 16 13201373 13208762 + MGP_LPJ_P0043131 Yars2 protein_coding protein_coding MGP_LPJ_T0043132.1 MGP_LPJ_G0022457.1 mouse_genomes_project 16 13201382 13207343 + Yars2 protein_coding retained_intron MGP_LPJ_T0043133.1 MGP_LPJ_G0022457.1 mouse_genomes_project 16 13201386 13209460 + MGP_LPJ_P0043133 Yars2 protein_coding protein_coding MGP_LPJ_T0043134.1 MGP_LPJ_G0022457.1 mouse_genomes_project 16 13201389 13209452 + MGP_LPJ_P0043134 Yars2 protein_coding nonsense_mediated_decay MGP_LPJ_T0043135.1 MGP_LPJ_G0022457.1 mouse_genomes_project 16 13201961 13207061 + Yars2 protein_coding processed_transcript MGP_LPJ_T0043136.1 MGP_LPJ_G0022457.1 mouse_genomes_project 16 13203008 13207200 + MGP_LPJ_P0043136 Yars2 protein_coding protein_coding MGP_LPJ_T0017433.1 MGP_LPJ_G0015232.1 mouse_genomes_project 16 20536887 20588875 + B630019A10Rik processed_transcript processed_transcript MGP_LPJ_T0044634.1 MGP_LPJ_G0022827.1 mouse_genomes_project 16 58338772 58339699 - MGP_LPJ_P0044634 protein_coding protein_coding MGP_LPJ_T0001002.1 MGP_LPJ_G0000928.1 mouse_genomes_project 16 77429784 77432900 + TEC TEC MGP_LPJ_T0044219.1 MGP_LPJ_G0022712.1 mouse_genomes_project 16 36554107 36559875 + MGP_LPJ_P0044219 Gm21987 protein_coding protein_coding MGP_LPJ_T0044220.1 MGP_LPJ_G0022712.1 mouse_genomes_project 16 36554112 36559853 + Gm21987 protein_coding processed_transcript MGP_LPJ_T0044221.1 MGP_LPJ_G0022712.1 mouse_genomes_project 16 36554138 36559856 + MGP_LPJ_P0044221 Gm21987 protein_coding protein_coding MGP_LPJ_T0044222.1 MGP_LPJ_G0022712.1 mouse_genomes_project 16 36554156 36559843 + Gm21987 protein_coding retained_intron MGP_LPJ_T0044224.1 MGP_LPJ_G0022712.1 mouse_genomes_project 16 36556357 36559835 + Gm21987 protein_coding retained_intron MGP_LPJ_T0044225.1 MGP_LPJ_G0022712.1 mouse_genomes_project 16 36556409 36559857 + Gm21987 protein_coding processed_transcript MGP_LPJ_T0099184.1 MGP_LPJ_G0037447.1 mouse_genomes_project 16 38550128 38550222 + Gm22543 snRNA snRNA MGP_LPJ_T0003655.1 MGP_LPJ_G0003312.1 mouse_genomes_project 16 383971 385484 - Gm15537 antisense antisense MGP_LPJ_T0044721.1 MGP_LPJ_G0022860.1 mouse_genomes_project 16 75675607 75727560 - MGP_LPJ_P0044721 Samsn1 protein_coding protein_coding MGP_LPJ_T0044722.1 MGP_LPJ_G0022860.1 mouse_genomes_project 16 75675608 75840419 - MGP_LPJ_P0044722 Samsn1 protein_coding protein_coding MGP_LPJ_T0044723.1 MGP_LPJ_G0022860.1 mouse_genomes_project 16 75701174 75727490 - Samsn1 protein_coding retained_intron MGP_LPJ_T0044724.1 MGP_LPJ_G0022860.1 mouse_genomes_project 16 75702266 75727560 - Samsn1 protein_coding retained_intron MGP_LPJ_T0044725.1 MGP_LPJ_G0022860.1 mouse_genomes_project 16 75706590 75727529 - Samsn1 protein_coding retained_intron MGP_LPJ_T0045121.1 MGP_LPJ_G0022978.1 mouse_genomes_project 16 95665542 95923655 - MGP_LPJ_P0045121 Kcnj6 protein_coding protein_coding MGP_LPJ_T0045122.1 MGP_LPJ_G0022978.1 mouse_genomes_project 16 95677407 95923655 - MGP_LPJ_P0045122 Kcnj6 protein_coding protein_coding MGP_LPJ_T0045123.1 MGP_LPJ_G0022978.1 mouse_genomes_project 16 95745930 95779812 - MGP_LPJ_P0045123 Kcnj6 protein_coding protein_coding MGP_LPJ_T0043089.1 MGP_LPJ_G0022442.1 mouse_genomes_project 16 11032542 11088840 - MGP_LPJ_P0043089 Marf1 protein_coding unknown_likely_coding MGP_LPJ_T0043090.1 MGP_LPJ_G0022442.1 mouse_genomes_project 16 11032542 11088880 - MGP_LPJ_P0043090 Marf1 protein_coding protein_coding MGP_LPJ_T0044898.1 MGP_LPJ_G0022936.1 mouse_genomes_project 16 91605870 91686634 - MGP_LPJ_P0044898 Synj1 protein_coding protein_coding MGP_LPJ_T0044899.1 MGP_LPJ_G0022936.1 mouse_genomes_project 16 91605880 91686421 - MGP_LPJ_P0044899 Synj1 protein_coding protein_coding MGP_LPJ_T0044900.1 MGP_LPJ_G0022936.1 mouse_genomes_project 16 91605885 91620050 - MGP_LPJ_P0044900 Synj1 protein_coding protein_coding MGP_LPJ_T0044901.1 MGP_LPJ_G0022936.1 mouse_genomes_project 16 91608017 91686439 - MGP_LPJ_P0044901 Synj1 protein_coding protein_coding MGP_LPJ_T0044902.1 MGP_LPJ_G0022936.1 mouse_genomes_project 16 91608434 91616284 - Synj1 protein_coding processed_transcript MGP_LPJ_T0044903.1 MGP_LPJ_G0022936.1 mouse_genomes_project 16 91608580 91614502 - MGP_LPJ_P0044903 Synj1 protein_coding protein_coding MGP_LPJ_T0044904.1 MGP_LPJ_G0022936.1 mouse_genomes_project 16 91614106 91620055 - MGP_LPJ_P0044904 Synj1 protein_coding protein_coding MGP_LPJ_T0044905.1 MGP_LPJ_G0022936.1 mouse_genomes_project 16 91632245 91686383 - Synj1 protein_coding retained_intron MGP_LPJ_T0044906.1 MGP_LPJ_G0022936.1 mouse_genomes_project 16 91636569 91686382 - MGP_LPJ_P0044906 Synj1 protein_coding protein_coding MGP_LPJ_T0044907.1 MGP_LPJ_G0022936.1 mouse_genomes_project 16 91684628 91686385 - Synj1 protein_coding retained_intron MGP_LPJ_T0044873.1 MGP_LPJ_G0022930.1 mouse_genomes_project 16 91006240 91131715 + MGP_LPJ_P0044873 Hunk protein_coding protein_coding MGP_LPJ_T0045199.1 MGP_LPJ_G0022990.1 mouse_genomes_project 16 97442761 97464052 - MGP_LPJ_P0045199 Itgb2l protein_coding protein_coding MGP_LPJ_T0045200.1 MGP_LPJ_G0022990.1 mouse_genomes_project 16 97442765 97464047 - MGP_LPJ_P0045200 Itgb2l protein_coding nonsense_mediated_decay MGP_LPJ_T0045201.1 MGP_LPJ_G0022990.1 mouse_genomes_project 16 97442849 97464045 - MGP_LPJ_P0045201 Itgb2l protein_coding protein_coding MGP_LPJ_T0045202.1 MGP_LPJ_G0022990.1 mouse_genomes_project 16 97447203 97449618 - Itgb2l protein_coding processed_transcript MGP_LPJ_T0043942.1 MGP_LPJ_G0022645.1 mouse_genomes_project 16 30489012 30515226 + Tnk2 protein_coding processed_transcript MGP_LPJ_T0043943.1 MGP_LPJ_G0022645.1 mouse_genomes_project 16 30489429 30510827 + Tnk2 protein_coding processed_transcript MGP_LPJ_T0043944.1 MGP_LPJ_G0022645.1 mouse_genomes_project 16 30489781 30532016 + MGP_LPJ_P0043944 Tnk2 protein_coding protein_coding MGP_LPJ_T0043945.1 MGP_LPJ_G0022645.1 mouse_genomes_project 16 30489781 30532016 + MGP_LPJ_P0043945 Tnk2 protein_coding protein_coding MGP_LPJ_T0043946.1 MGP_LPJ_G0022645.1 mouse_genomes_project 16 30489811 30532016 + MGP_LPJ_P0043946 Tnk2 protein_coding protein_coding MGP_LPJ_T0043947.1 MGP_LPJ_G0022645.1 mouse_genomes_project 16 30489964 30532015 + MGP_LPJ_P0043947 Tnk2 protein_coding protein_coding MGP_LPJ_T0043948.1 MGP_LPJ_G0022645.1 mouse_genomes_project 16 30490097 30515239 + Tnk2 protein_coding processed_transcript MGP_LPJ_T0043949.1 MGP_LPJ_G0022645.1 mouse_genomes_project 16 30503958 30515218 + Tnk2 protein_coding processed_transcript MGP_LPJ_T0043950.1 MGP_LPJ_G0022645.1 mouse_genomes_project 16 30505857 30515210 + Tnk2 protein_coding processed_transcript MGP_LPJ_T0043951.1 MGP_LPJ_G0022645.1 mouse_genomes_project 16 30515186 30518608 + Tnk2 protein_coding processed_transcript MGP_LPJ_T0043952.1 MGP_LPJ_G0022645.1 mouse_genomes_project 16 30520127 30527991 + MGP_LPJ_P0043952 Tnk2 protein_coding protein_coding MGP_LPJ_T0043953.1 MGP_LPJ_G0022645.1 mouse_genomes_project 16 30520129 30532016 + MGP_LPJ_P0043953 Tnk2 protein_coding protein_coding MGP_LPJ_T0043954.1 MGP_LPJ_G0022645.1 mouse_genomes_project 16 30520151 30528205 + MGP_LPJ_P0043954 Tnk2 protein_coding protein_coding MGP_LPJ_T0043955.1 MGP_LPJ_G0022645.1 mouse_genomes_project 16 30520165 30528658 + MGP_LPJ_P0043955 Tnk2 protein_coding protein_coding MGP_LPJ_T0043956.1 MGP_LPJ_G0022645.1 mouse_genomes_project 16 30520168 30527586 + Tnk2 protein_coding retained_intron MGP_LPJ_T0043957.1 MGP_LPJ_G0022645.1 mouse_genomes_project 16 30520172 30528407 + MGP_LPJ_P0043957 Tnk2 protein_coding protein_coding MGP_LPJ_T0000985.1 MGP_LPJ_G0000912.1 mouse_genomes_project 16 16270343 16271653 + TEC TEC MGP_LPJ_T0042800.1 MGP_LPJ_G0022369.1 mouse_genomes_project 16 1131085 1184543 - MGP_LPJ_P0042800 Coro7 protein_coding protein_coding MGP_LPJ_T0042801.1 MGP_LPJ_G0022369.1 mouse_genomes_project 16 1132329 1133824 - Coro7 protein_coding processed_transcript MGP_LPJ_T0042802.1 MGP_LPJ_G0022369.1 mouse_genomes_project 16 1133704 1134619 - Coro7 protein_coding retained_intron MGP_LPJ_T0042803.1 MGP_LPJ_G0022369.1 mouse_genomes_project 16 1134011 1184444 - MGP_LPJ_P0042803 Coro7 protein_coding nonsense_mediated_decay MGP_LPJ_T0042804.1 MGP_LPJ_G0022369.1 mouse_genomes_project 16 1136830 1138812 - Coro7 protein_coding retained_intron MGP_LPJ_T0042805.1 MGP_LPJ_G0022369.1 mouse_genomes_project 16 1137198 1139988 - Coro7 protein_coding retained_intron MGP_LPJ_T0042806.1 MGP_LPJ_G0022369.1 mouse_genomes_project 16 1138229 1151866 - Coro7 protein_coding processed_transcript MGP_LPJ_T0042807.1 MGP_LPJ_G0022369.1 mouse_genomes_project 16 1138276 1139994 - Coro7 protein_coding retained_intron MGP_LPJ_T0042808.1 MGP_LPJ_G0022369.1 mouse_genomes_project 16 1139550 1166889 - Coro7 protein_coding retained_intron MGP_LPJ_T0042812.1 MGP_LPJ_G0022369.1 mouse_genomes_project 16 1157715 1184543 - MGP_LPJ_P0042812 Coro7 protein_coding protein_coding MGP_LPJ_T0042813.1 MGP_LPJ_G0022369.1 mouse_genomes_project 16 1165268 1184479 - Coro7 protein_coding retained_intron MGP_LPJ_T0042814.1 MGP_LPJ_G0022369.1 mouse_genomes_project 16 1180360 1184508 - Coro7 protein_coding retained_intron MGP_LPJ_T0045230.1 MGP_LPJ_G0023001.1 mouse_genomes_project 16 99188610 99188844 - MGP_LPJ_P0045230 Gm6020 protein_coding protein_coding MGP_LPJ_T0044471.1 MGP_LPJ_G0022773.1 mouse_genomes_project 16 47629963 47659685 + MGP_LPJ_P0044471 C330027C09Rik protein_coding protein_coding MGP_LPJ_T0044472.1 MGP_LPJ_G0022773.1 mouse_genomes_project 16 47629966 47659685 + MGP_LPJ_P0044472 C330027C09Rik protein_coding protein_coding MGP_LPJ_T0044473.1 MGP_LPJ_G0022773.1 mouse_genomes_project 16 47630001 47636839 + MGP_LPJ_P0044473 C330027C09Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0044474.1 MGP_LPJ_G0022773.1 mouse_genomes_project 16 47636617 47637847 + C330027C09Rik protein_coding retained_intron MGP_LPJ_T0044475.1 MGP_LPJ_G0022773.1 mouse_genomes_project 16 47644203 47659631 + C330027C09Rik protein_coding retained_intron MGP_LPJ_T0044476.1 MGP_LPJ_G0022773.1 mouse_genomes_project 16 47646222 47653286 + C330027C09Rik protein_coding retained_intron MGP_LPJ_T0044477.1 MGP_LPJ_G0022773.1 mouse_genomes_project 16 47653290 47654345 + C330027C09Rik protein_coding retained_intron MGP_LPJ_T0044478.1 MGP_LPJ_G0022773.1 mouse_genomes_project 16 47655832 47659689 + C330027C09Rik protein_coding retained_intron MGP_LPJ_T0000017.1 MGP_LPJ_G0000012.1 mouse_genomes_project 16 16086129 16086581 - MGP_LPJ_P0000017 Iglc3 IG_C_gene IG_C_gene MGP_LPJ_T0013118.1 MGP_LPJ_G0011209.1 mouse_genomes_project 16 8002235 8003247 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098504.1 MGP_LPJ_G0036780.1 mouse_genomes_project 16 2520301 2542987 + 1700123O21Rik sense_intronic sense_intronic MGP_LPJ_T0000043.1 MGP_LPJ_G0000035.1 mouse_genomes_project 16 16087270 16087308 - MGP_LPJ_P0000043 Iglj3p IG_J_gene IG_J_gene MGP_LPJ_T0017427.1 MGP_LPJ_G0015227.1 mouse_genomes_project 16 1780029 1822228 + Gm15983 processed_transcript processed_transcript MGP_LPJ_T0044631.1 MGP_LPJ_G0022824.1 mouse_genomes_project 16 58226580 58230464 - MGP_LPJ_P0044631 Olfr196 protein_coding protein_coding MGP_LPJ_T0044101.1 MGP_LPJ_G0022678.1 mouse_genomes_project 16 34135083 34136867 + MGP_LPJ_P0044101 Wdr5b protein_coding protein_coding MGP_LPJ_T0010119.1 MGP_LPJ_G0008237.1 mouse_genomes_project 16 383374 383462 + Gm23493 miRNA miRNA MGP_LPJ_T0044511.1 MGP_LPJ_G0022784.1 mouse_genomes_project 16 54810438 54839284 - MGP_LPJ_P0044511 Cep97 protein_coding protein_coding MGP_LPJ_T0044512.1 MGP_LPJ_G0022784.1 mouse_genomes_project 16 54828145 54839286 - MGP_LPJ_P0044512 Cep97 protein_coding protein_coding MGP_LPJ_T0044513.1 MGP_LPJ_G0022784.1 mouse_genomes_project 16 54828152 54839343 - MGP_LPJ_P0044513 Cep97 protein_coding protein_coding MGP_LPJ_T0044514.1 MGP_LPJ_G0022784.1 mouse_genomes_project 16 54828340 54839322 - MGP_LPJ_P0044514 Cep97 protein_coding protein_coding MGP_LPJ_T0044814.1 MGP_LPJ_G0022890.1 mouse_genomes_project 16 89120859 89121740 - MGP_LPJ_P0044814 2310079G19Rik protein_coding protein_coding MGP_LPJ_T0101647.1 MGP_LPJ_G0039704.1 mouse_genomes_project 16 17494587 17502073 + unitary_pseudogene unitary_pseudogene MGP_LPJ_T0043694.1 MGP_LPJ_G0022579.1 mouse_genomes_project 16 20282981 20359646 - MGP_LPJ_P0043694 Kng2 protein_coding protein_coding MGP_LPJ_T0043695.1 MGP_LPJ_G0022579.1 mouse_genomes_project 16 20283732 20359679 - MGP_LPJ_P0043695 Kng2 protein_coding protein_coding MGP_LPJ_T0043696.1 MGP_LPJ_G0022579.1 mouse_genomes_project 16 20283732 20359595 - MGP_LPJ_P0043696 Kng2 protein_coding protein_coding MGP_LPJ_T0043697.1 MGP_LPJ_G0022579.1 mouse_genomes_project 16 20283732 20359587 - MGP_LPJ_P0043697 Kng2 protein_coding nonsense_mediated_decay MGP_LPJ_T0044299.1 MGP_LPJ_G0022730.1 mouse_genomes_project 16 42180350 42252177 + MGP_LPJ_P0044299 Drd3 protein_coding protein_coding MGP_LPJ_T0101905.1 MGP_LPJ_G0039942.1 mouse_genomes_project 16 88949 89889 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0100427.1 MGP_LPJ_G0038690.1 mouse_genomes_project 16 30073347 30073491 - Gm25848 snoRNA snoRNA MGP_LPJ_T0045032.1 MGP_LPJ_G0022963.1 mouse_genomes_project 16 93388786 93623980 - MGP_LPJ_P0045032 Runx1 protein_coding protein_coding MGP_LPJ_T0045033.1 MGP_LPJ_G0022963.1 mouse_genomes_project 16 93390976 93488478 - MGP_LPJ_P0045033 Runx1 protein_coding protein_coding MGP_LPJ_T0045034.1 MGP_LPJ_G0022963.1 mouse_genomes_project 16 93392718 93487275 - MGP_LPJ_P0045034 Runx1 protein_coding protein_coding MGP_LPJ_T0045035.1 MGP_LPJ_G0022963.1 mouse_genomes_project 16 93476566 93486645 - MGP_LPJ_P0045035 Runx1 protein_coding protein_coding MGP_LPJ_T0045036.1 MGP_LPJ_G0022963.1 mouse_genomes_project 16 93476599 93488475 - Runx1 protein_coding retained_intron MGP_LPJ_T0045037.1 MGP_LPJ_G0022963.1 mouse_genomes_project 16 93486741 93623609 - MGP_LPJ_P0045037 Runx1 protein_coding protein_coding MGP_LPJ_T0045038.1 MGP_LPJ_G0022963.1 mouse_genomes_project 16 93613258 93623905 - MGP_LPJ_P0045038 Runx1 protein_coding protein_coding MGP_LPJ_T0043526.1 MGP_LPJ_G0022543.1 mouse_genomes_project 16 17386874 17483426 - MGP_LPJ_P0043526 Abcc5 protein_coding protein_coding MGP_LPJ_T0043527.1 MGP_LPJ_G0022543.1 mouse_genomes_project 16 17386877 17483367 - MGP_LPJ_P0043527 Abcc5 protein_coding protein_coding MGP_LPJ_T0043528.1 MGP_LPJ_G0022543.1 mouse_genomes_project 16 17386879 17456661 - Abcc5 protein_coding retained_intron MGP_LPJ_T0043529.1 MGP_LPJ_G0022543.1 mouse_genomes_project 16 17396141 17421141 - Abcc5 protein_coding processed_transcript MGP_LPJ_T0043530.1 MGP_LPJ_G0022543.1 mouse_genomes_project 16 17401822 17421335 - Abcc5 protein_coding retained_intron MGP_LPJ_T0043531.1 MGP_LPJ_G0022543.1 mouse_genomes_project 16 17426011 17433751 - Abcc5 protein_coding retained_intron MGP_LPJ_T0043532.1 MGP_LPJ_G0022543.1 mouse_genomes_project 16 17435592 17453499 - Abcc5 protein_coding retained_intron MGP_LPJ_T0043533.1 MGP_LPJ_G0022543.1 mouse_genomes_project 16 17449770 17483018 - MGP_LPJ_P0043533 Abcc5 protein_coding protein_coding MGP_LPJ_T0043534.1 MGP_LPJ_G0022543.1 mouse_genomes_project 16 17455856 17457326 - Abcc5 protein_coding retained_intron MGP_LPJ_T0043535.1 MGP_LPJ_G0022543.1 mouse_genomes_project 16 17457799 17483356 - Abcc5 protein_coding retained_intron MGP_LPJ_T0043536.1 MGP_LPJ_G0022543.1 mouse_genomes_project 16 17457800 17483386 - MGP_LPJ_P0043536 Abcc5 protein_coding protein_coding MGP_LPJ_T0043537.1 MGP_LPJ_G0022543.1 mouse_genomes_project 16 17457801 17461745 - Abcc5 protein_coding processed_transcript MGP_LPJ_T0043140.1 MGP_LPJ_G0022459.1 mouse_genomes_project 16 13311022 13444344 - MGP_LPJ_P0043140 Fgd4 protein_coding protein_coding MGP_LPJ_T0043141.1 MGP_LPJ_G0022459.1 mouse_genomes_project 16 13316668 13493277 - MGP_LPJ_P0043141 Fgd4 protein_coding protein_coding MGP_LPJ_T0043142.1 MGP_LPJ_G0022459.1 mouse_genomes_project 16 13316707 13408200 - MGP_LPJ_P0043142 Fgd4 protein_coding protein_coding MGP_LPJ_T0043143.1 MGP_LPJ_G0022459.1 mouse_genomes_project 16 13326829 13444171 - Fgd4 protein_coding retained_intron MGP_LPJ_T0043144.1 MGP_LPJ_G0022459.1 mouse_genomes_project 16 13326829 13389287 - MGP_LPJ_P0043144 Fgd4 protein_coding protein_coding MGP_LPJ_T0043145.1 MGP_LPJ_G0022459.1 mouse_genomes_project 16 13342728 13444336 - Fgd4 protein_coding retained_intron MGP_LPJ_T0043146.1 MGP_LPJ_G0022459.1 mouse_genomes_project 16 13344428 13444336 - Fgd4 protein_coding retained_intron MGP_LPJ_T0043147.1 MGP_LPJ_G0022459.1 mouse_genomes_project 16 13352518 13493848 - MGP_LPJ_P0043147 Fgd4 protein_coding protein_coding MGP_LPJ_T0043148.1 MGP_LPJ_G0022459.1 mouse_genomes_project 16 13359739 13444115 - Fgd4 protein_coding retained_intron MGP_LPJ_T0043149.1 MGP_LPJ_G0022459.1 mouse_genomes_project 16 13369887 13493338 - Fgd4 protein_coding retained_intron MGP_LPJ_T0043150.1 MGP_LPJ_G0022459.1 mouse_genomes_project 16 13370866 13408200 - Fgd4 protein_coding retained_intron MGP_LPJ_T0043025.1 MGP_LPJ_G0022427.1 mouse_genomes_project 16 8632312 8753966 - MGP_LPJ_P0043025 Cpped1 protein_coding protein_coding MGP_LPJ_T0043026.1 MGP_LPJ_G0022427.1 mouse_genomes_project 16 8632318 8753965 - MGP_LPJ_P0043026 Cpped1 protein_coding protein_coding MGP_LPJ_T0043027.1 MGP_LPJ_G0022427.1 mouse_genomes_project 16 8655038 8753939 - Cpped1 protein_coding retained_intron MGP_LPJ_T0043028.1 MGP_LPJ_G0022427.1 mouse_genomes_project 16 8656027 8753941 - MGP_LPJ_P0043028 Cpped1 protein_coding protein_coding MGP_LPJ_T0043029.1 MGP_LPJ_G0022427.1 mouse_genomes_project 16 8710010 8753988 - MGP_LPJ_P0043029 Cpped1 protein_coding protein_coding MGP_LPJ_T0099179.1 MGP_LPJ_G0037442.1 mouse_genomes_project 16 34485252 34485359 + Gm22349 snRNA snRNA MGP_LPJ_T0043502.1 MGP_LPJ_G0022537.1 mouse_genomes_project 16 16989367 17025653 - MGP_LPJ_P0043502 Klhl6 protein_coding protein_coding MGP_LPJ_T0043503.1 MGP_LPJ_G0022537.1 mouse_genomes_project 16 16999729 17009104 - Klhl6 protein_coding retained_intron MGP_LPJ_T0043504.1 MGP_LPJ_G0022537.1 mouse_genomes_project 16 16999749 17025623 - MGP_LPJ_P0043504 Klhl6 protein_coding nonsense_mediated_decay MGP_LPJ_T0043505.1 MGP_LPJ_G0022537.1 mouse_genomes_project 16 17008828 17025546 - MGP_LPJ_P0043505 Klhl6 protein_coding nonsense_mediated_decay MGP_LPJ_T0003672.1 MGP_LPJ_G0003327.1 mouse_genomes_project 16 23448951 23452819 + Gm4524 antisense antisense MGP_LPJ_T0010166.1 MGP_LPJ_G0008284.1 mouse_genomes_project 16 64750056 64750166 + Gm23659 miRNA miRNA MGP_LPJ_T0044849.1 MGP_LPJ_G0022921.1 mouse_genomes_project 16 89732577 89733121 + MGP_LPJ_P0044849 Krtap20-2 protein_coding protein_coding MGP_LPJ_T0043810.1 MGP_LPJ_G0022609.1 mouse_genomes_project 16 27632500 27636311 - MGP_LPJ_P0043810 Gm1968 protein_coding protein_coding MGP_LPJ_T0043958.1 MGP_LPJ_G0022646.1 mouse_genomes_project 16 30597645 30612634 + MGP_LPJ_P0043958 protein_coding protein_coding MGP_LPJ_T0043959.1 MGP_LPJ_G0022646.1 mouse_genomes_project 16 30597956 30663526 + protein_coding processed_transcript MGP_LPJ_T0043960.1 MGP_LPJ_G0022646.1 mouse_genomes_project 16 30634191 30663691 + MGP_LPJ_P0043960 protein_coding protein_coding MGP_LPJ_T0043961.1 MGP_LPJ_G0022646.1 mouse_genomes_project 16 30655822 30663684 + protein_coding processed_transcript MGP_LPJ_T0043962.1 MGP_LPJ_G0022646.1 mouse_genomes_project 16 30655901 30656500 + protein_coding processed_transcript MGP_LPJ_T0043964.1 MGP_LPJ_G0022646.1 mouse_genomes_project 16 30657076 30658471 + protein_coding retained_intron MGP_LPJ_T0043965.1 MGP_LPJ_G0022646.1 mouse_genomes_project 16 30658161 30658674 + protein_coding retained_intron MGP_LPJ_T0006870.1 MGP_LPJ_G0005668.1 mouse_genomes_project 16 48467348 48471720 + Gm16619 lincRNA lincRNA MGP_LPJ_T0043492.1 MGP_LPJ_G0022533.1 mouse_genomes_project 16 16657386 16676503 - MGP_LPJ_P0043492 protein_coding protein_coding MGP_LPJ_T0043458.1 MGP_LPJ_G0022520.1 mouse_genomes_project 16 15821520 15826686 + MGP_LPJ_P0043458 Ufd1l protein_coding protein_coding MGP_LPJ_T0043459.1 MGP_LPJ_G0022520.1 mouse_genomes_project 16 15821565 15845623 + MGP_LPJ_P0043459 Ufd1l protein_coding nonsense_mediated_decay MGP_LPJ_T0043460.1 MGP_LPJ_G0022520.1 mouse_genomes_project 16 15821573 15846569 + MGP_LPJ_P0043460 Ufd1l protein_coding protein_coding MGP_LPJ_T0043461.1 MGP_LPJ_G0022520.1 mouse_genomes_project 16 15822035 15827239 + Ufd1l protein_coding processed_transcript MGP_LPJ_T0043462.1 MGP_LPJ_G0022520.1 mouse_genomes_project 16 15822035 15846574 + MGP_LPJ_P0043462 Ufd1l protein_coding protein_coding MGP_LPJ_T0043463.1 MGP_LPJ_G0022520.1 mouse_genomes_project 16 15822062 15839010 + MGP_LPJ_P0043463 Ufd1l protein_coding nonsense_mediated_decay MGP_LPJ_T0043464.1 MGP_LPJ_G0022520.1 mouse_genomes_project 16 15822097 15836371 + MGP_LPJ_P0043464 Ufd1l protein_coding nonsense_mediated_decay MGP_LPJ_T0043465.1 MGP_LPJ_G0022520.1 mouse_genomes_project 16 15834554 15845567 + Ufd1l protein_coding retained_intron MGP_LPJ_T0043466.1 MGP_LPJ_G0022520.1 mouse_genomes_project 16 15838373 15839768 + MGP_LPJ_P0043466 Ufd1l protein_coding protein_coding MGP_LPJ_T0043467.1 MGP_LPJ_G0022520.1 mouse_genomes_project 16 15838561 15845717 + Ufd1l protein_coding retained_intron MGP_LPJ_T0098503.1 MGP_LPJ_G0036779.1 mouse_genomes_project 16 1281772 1283484 - Gm15835 sense_intronic sense_intronic MGP_LPJ_T0043261.1 MGP_LPJ_G0022480.1 mouse_genomes_project 16 14401182 14418997 + MGP_LPJ_P0043261 Aifm3 protein_coding protein_coding MGP_LPJ_T0043262.1 MGP_LPJ_G0022480.1 mouse_genomes_project 16 14401199 14419001 + MGP_LPJ_P0043262 Aifm3 protein_coding unknown_likely_coding MGP_LPJ_T0043263.1 MGP_LPJ_G0022480.1 mouse_genomes_project 16 14401234 14418997 + MGP_LPJ_P0043263 Aifm3 protein_coding protein_coding MGP_LPJ_T0043264.1 MGP_LPJ_G0022480.1 mouse_genomes_project 16 14401418 14416918 + Aifm3 protein_coding retained_intron MGP_LPJ_T0043265.1 MGP_LPJ_G0022480.1 mouse_genomes_project 16 14411183 14418993 + Aifm3 protein_coding retained_intron MGP_LPJ_T0043266.1 MGP_LPJ_G0022480.1 mouse_genomes_project 16 14413753 14415214 + Aifm3 protein_coding retained_intron MGP_LPJ_T0043267.1 MGP_LPJ_G0022480.1 mouse_genomes_project 16 14414403 14417436 + Aifm3 protein_coding retained_intron MGP_LPJ_T0044062.1 MGP_LPJ_G0022668.1 mouse_genomes_project 16 33175096 33336951 + MGP_LPJ_P0044062 Adcy5 protein_coding protein_coding MGP_LPJ_T0011423.1 MGP_LPJ_G0009541.1 mouse_genomes_project 16 19857355 19857547 + Gm22481 misc_RNA misc_RNA MGP_LPJ_T0001007.1 MGP_LPJ_G0000933.1 mouse_genomes_project 16 79602138 79602738 + TEC TEC MGP_LPJ_T0043689.1 MGP_LPJ_G0022577.1 mouse_genomes_project 16 20198491 20217351 + MGP_LPJ_P0043689 Fetub protein_coding protein_coding MGP_LPJ_T0043690.1 MGP_LPJ_G0022577.1 mouse_genomes_project 16 20200333 20217351 + MGP_LPJ_P0043690 Fetub protein_coding protein_coding MGP_LPJ_T0043691.1 MGP_LPJ_G0022577.1 mouse_genomes_project 16 20201862 20217342 + MGP_LPJ_P0043691 Fetub protein_coding protein_coding MGP_LPJ_T0043692.1 MGP_LPJ_G0022577.1 mouse_genomes_project 16 20205935 20217345 + MGP_LPJ_P0043692 Fetub protein_coding protein_coding MGP_LPJ_T0006848.1 MGP_LPJ_G0005649.1 mouse_genomes_project 16 18407822 18461166 - lincRNA lincRNA MGP_LPJ_T0044519.1 MGP_LPJ_G0022786.1 mouse_genomes_project 16 54884034 54921941 + MGP_LPJ_P0044519 Zbtb11 protein_coding protein_coding MGP_LPJ_T0044520.1 MGP_LPJ_G0022786.1 mouse_genomes_project 16 54899125 54902284 + Zbtb11 protein_coding retained_intron MGP_LPJ_T0044521.1 MGP_LPJ_G0022786.1 mouse_genomes_project 16 54918219 54921941 + Zbtb11 protein_coding retained_intron MGP_LPJ_T0000999.1 MGP_LPJ_G0000925.1 mouse_genomes_project 16 77341759 77345276 + TEC TEC MGP_LPJ_T0006849.1 MGP_LPJ_G0005650.1 mouse_genomes_project 16 18984032 18995803 + 1300002E11Rik lincRNA lincRNA MGP_LPJ_T0006850.1 MGP_LPJ_G0005650.1 mouse_genomes_project 16 18984047 19006736 + 1300002E11Rik lincRNA lincRNA MGP_LPJ_T0006851.1 MGP_LPJ_G0005650.1 mouse_genomes_project 16 18984077 18995803 + 1300002E11Rik lincRNA lincRNA MGP_LPJ_T0044678.1 MGP_LPJ_G0022847.1 mouse_genomes_project 16 64240817 64427108 - MGP_LPJ_P0044678 Htr1f protein_coding protein_coding MGP_LPJ_T0042914.1 MGP_LPJ_G0022400.1 mouse_genomes_project 16 5333504 5442016 - MGP_LPJ_P0042914 Usp7 protein_coding protein_coding MGP_LPJ_T0042915.1 MGP_LPJ_G0022400.1 mouse_genomes_project 16 5333509 5385164 - MGP_LPJ_P0042915 Usp7 protein_coding nonsense_mediated_decay MGP_LPJ_T0042916.1 MGP_LPJ_G0022400.1 mouse_genomes_project 16 5334055 5385087 - MGP_LPJ_P0042916 Usp7 protein_coding protein_coding MGP_LPJ_T0042917.1 MGP_LPJ_G0022400.1 mouse_genomes_project 16 5334689 5367693 - Usp7 protein_coding processed_transcript MGP_LPJ_T0042918.1 MGP_LPJ_G0022400.1 mouse_genomes_project 16 5340086 5342740 - Usp7 protein_coding retained_intron MGP_LPJ_T0042919.1 MGP_LPJ_G0022400.1 mouse_genomes_project 16 5340586 5341491 - Usp7 protein_coding retained_intron MGP_LPJ_T0042920.1 MGP_LPJ_G0022400.1 mouse_genomes_project 16 5341385 5342442 - Usp7 protein_coding retained_intron MGP_LPJ_T0042921.1 MGP_LPJ_G0022400.1 mouse_genomes_project 16 5341560 5352766 - MGP_LPJ_P0042921 Usp7 protein_coding nonsense_mediated_decay MGP_LPJ_T0042922.1 MGP_LPJ_G0022400.1 mouse_genomes_project 16 5344066 5349818 - Usp7 protein_coding retained_intron MGP_LPJ_T0042923.1 MGP_LPJ_G0022400.1 mouse_genomes_project 16 5349502 5352964 - Usp7 protein_coding retained_intron MGP_LPJ_T0042924.1 MGP_LPJ_G0022400.1 mouse_genomes_project 16 5350981 5351346 - Usp7 protein_coding retained_intron MGP_LPJ_T0042925.1 MGP_LPJ_G0022400.1 mouse_genomes_project 16 5350990 5352256 - Usp7 protein_coding retained_intron MGP_LPJ_T0042926.1 MGP_LPJ_G0022400.1 mouse_genomes_project 16 5351996 5352865 - Usp7 protein_coding retained_intron MGP_LPJ_T0042932.1 MGP_LPJ_G0022403.1 mouse_genomes_project 16 6906109 6910509 + MGP_LPJ_P0042932 Rpl39l protein_coding protein_coding MGP_LPJ_T0042933.1 MGP_LPJ_G0022403.1 mouse_genomes_project 16 6906111 6910790 + MGP_LPJ_P0042933 Rpl39l protein_coding protein_coding MGP_LPJ_T0044738.1 MGP_LPJ_G0022867.1 mouse_genomes_project 16 78455256 78481318 - MGP_LPJ_P0044738 D16Ertd472e protein_coding protein_coding MGP_LPJ_T0044739.1 MGP_LPJ_G0022867.1 mouse_genomes_project 16 78455933 78481318 - MGP_LPJ_P0044739 D16Ertd472e protein_coding protein_coding MGP_LPJ_T0044740.1 MGP_LPJ_G0022867.1 mouse_genomes_project 16 78456205 78481318 - MGP_LPJ_P0044740 D16Ertd472e protein_coding protein_coding MGP_LPJ_T0010138.1 MGP_LPJ_G0008256.1 mouse_genomes_project 16 16346387 16346497 + Gm23612 miRNA miRNA MGP_LPJ_T0043331.1 MGP_LPJ_G0022488.1 mouse_genomes_project 16 14575291 14648442 - MGP_LPJ_P0043331 Med15 protein_coding protein_coding MGP_LPJ_T0043332.1 MGP_LPJ_G0022488.1 mouse_genomes_project 16 14575291 14648442 - MGP_LPJ_P0043332 Med15 protein_coding protein_coding MGP_LPJ_T0003698.1 MGP_LPJ_G0003346.1 mouse_genomes_project 16 48425098 48465686 - Gm15518 antisense antisense MGP_LPJ_T0100422.1 MGP_LPJ_G0038685.1 mouse_genomes_project 16 20468105 20468244 + Gm24616 snoRNA snoRNA MGP_LPJ_T0043968.1 MGP_LPJ_G0022649.1 mouse_genomes_project 16 30704876 30755824 - MGP_LPJ_P0043968 Rubcn protein_coding protein_coding MGP_LPJ_T0043969.1 MGP_LPJ_G0022649.1 mouse_genomes_project 16 30704880 30708094 - Rubcn protein_coding retained_intron MGP_LPJ_T0043970.1 MGP_LPJ_G0022649.1 mouse_genomes_project 16 30704880 30755797 - MGP_LPJ_P0043970 Rubcn protein_coding protein_coding MGP_LPJ_T0043971.1 MGP_LPJ_G0022649.1 mouse_genomes_project 16 30704893 30755597 - MGP_LPJ_P0043971 Rubcn protein_coding protein_coding MGP_LPJ_T0043972.1 MGP_LPJ_G0022649.1 mouse_genomes_project 16 30704901 30755809 - MGP_LPJ_P0043972 Rubcn protein_coding protein_coding MGP_LPJ_T0043973.1 MGP_LPJ_G0022649.1 mouse_genomes_project 16 30706640 30721742 - Rubcn protein_coding retained_intron MGP_LPJ_T0043974.1 MGP_LPJ_G0022649.1 mouse_genomes_project 16 30711124 30712878 - Rubcn protein_coding retained_intron MGP_LPJ_T0043975.1 MGP_LPJ_G0022649.1 mouse_genomes_project 16 30718673 30719719 - Rubcn protein_coding retained_intron MGP_LPJ_T0043976.1 MGP_LPJ_G0022649.1 mouse_genomes_project 16 30747888 30755796 - Rubcn protein_coding processed_transcript MGP_LPJ_T0042968.1 MGP_LPJ_G0022412.1 mouse_genomes_project 16 7563482 7565211 - MGP_LPJ_P0042968 Socs1 protein_coding protein_coding MGP_LPJ_T0011429.1 MGP_LPJ_G0009547.1 mouse_genomes_project 16 46350392 46350624 + Gm25339 misc_RNA misc_RNA MGP_LPJ_T0043268.1 MGP_LPJ_G0022481.1 mouse_genomes_project 16 14420199 14444732 + MGP_LPJ_P0043268 Lztr1 protein_coding protein_coding MGP_LPJ_T0043269.1 MGP_LPJ_G0022481.1 mouse_genomes_project 16 14420479 14444730 + MGP_LPJ_P0043269 Lztr1 protein_coding protein_coding MGP_LPJ_T0043270.1 MGP_LPJ_G0022481.1 mouse_genomes_project 16 14420484 14441976 + Lztr1 protein_coding retained_intron MGP_LPJ_T0043271.1 MGP_LPJ_G0022481.1 mouse_genomes_project 16 14420484 14423737 + Lztr1 protein_coding retained_intron MGP_LPJ_T0043272.1 MGP_LPJ_G0022481.1 mouse_genomes_project 16 14420723 14429266 + Lztr1 protein_coding processed_transcript MGP_LPJ_T0043273.1 MGP_LPJ_G0022481.1 mouse_genomes_project 16 14422573 14438172 + Lztr1 protein_coding processed_transcript MGP_LPJ_T0043274.1 MGP_LPJ_G0022481.1 mouse_genomes_project 16 14429042 14436693 + Lztr1 protein_coding processed_transcript MGP_LPJ_T0043275.1 MGP_LPJ_G0022481.1 mouse_genomes_project 16 14435246 14437691 + Lztr1 protein_coding retained_intron MGP_LPJ_T0043276.1 MGP_LPJ_G0022481.1 mouse_genomes_project 16 14438080 14444730 + MGP_LPJ_P0043276 Lztr1 protein_coding protein_coding MGP_LPJ_T0043277.1 MGP_LPJ_G0022481.1 mouse_genomes_project 16 14439805 14441380 + Lztr1 protein_coding retained_intron MGP_LPJ_T0043278.1 MGP_LPJ_G0022481.1 mouse_genomes_project 16 14441222 14444170 + Lztr1 protein_coding retained_intron MGP_LPJ_T0097996.1 MGP_LPJ_G0036277.1 mouse_genomes_project 16 29741837 29742262 - pseudogene pseudogene MGP_LPJ_T0010158.1 MGP_LPJ_G0008276.1 mouse_genomes_project 16 43034930 43035014 - Mir3081 miRNA miRNA MGP_LPJ_T0044068.1 MGP_LPJ_G0022670.1 mouse_genomes_project 16 33432528 33537027 - MGP_LPJ_P0044068 Pdia5 protein_coding protein_coding MGP_LPJ_T0045071.1 MGP_LPJ_G0022972.1 mouse_genomes_project 16 95017705 95190977 - MGP_LPJ_P0045071 Hlcs protein_coding protein_coding MGP_LPJ_T0000149.1 MGP_LPJ_G0000110.1 mouse_genomes_project 16 16117949 16118433 - MGP_LPJ_P0000149 Iglv1 IG_V_gene IG_V_gene MGP_LPJ_T0006876.1 MGP_LPJ_G0005671.1 mouse_genomes_project 16 49506556 49508925 + lincRNA lincRNA MGP_LPJ_T0006877.1 MGP_LPJ_G0005671.1 mouse_genomes_project 16 49506625 49508899 + lincRNA lincRNA MGP_LPJ_T0044562.1 MGP_LPJ_G0022795.1 mouse_genomes_project 16 55999678 56035974 - MGP_LPJ_P0044562 Tmem45a2 protein_coding protein_coding MGP_LPJ_T0044845.1 MGP_LPJ_G0022917.1 mouse_genomes_project 16 89693816 89694275 + MGP_LPJ_P0044845 Gm10061 protein_coding protein_coding MGP_LPJ_T0043630.1 MGP_LPJ_G0022558.1 mouse_genomes_project 16 17812365 17821623 + MGP_LPJ_P0043630 Chrd protein_coding protein_coding MGP_LPJ_T0043631.1 MGP_LPJ_G0022558.1 mouse_genomes_project 16 17812365 17817391 + MGP_LPJ_P0043631 Chrd protein_coding protein_coding MGP_LPJ_T0043632.1 MGP_LPJ_G0022558.1 mouse_genomes_project 16 17812365 17821623 + MGP_LPJ_P0043632 Chrd protein_coding nonsense_mediated_decay MGP_LPJ_T0043633.1 MGP_LPJ_G0022558.1 mouse_genomes_project 16 17815444 17821621 + Chrd protein_coding retained_intron MGP_LPJ_T0043103.1 MGP_LPJ_G0022446.1 mouse_genomes_project 16 11301176 11424081 + MGP_LPJ_P0043103 Abcc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0043104.1 MGP_LPJ_G0022446.1 mouse_genomes_project 16 11301176 11424081 + MGP_LPJ_P0043104 Abcc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0043105.1 MGP_LPJ_G0022446.1 mouse_genomes_project 16 11301176 11424081 + MGP_LPJ_P0043105 Abcc1 protein_coding nonsense_mediated_decay MGP_LPJ_T0043106.1 MGP_LPJ_G0022446.1 mouse_genomes_project 16 11301178 11425916 + MGP_LPJ_P0043106 Abcc1 protein_coding protein_coding MGP_LPJ_T0043107.1 MGP_LPJ_G0022446.1 mouse_genomes_project 16 11301194 11342300 + MGP_LPJ_P0043107 Abcc1 protein_coding protein_coding MGP_LPJ_T0043108.1 MGP_LPJ_G0022446.1 mouse_genomes_project 16 11301199 11350824 + MGP_LPJ_P0043108 Abcc1 protein_coding protein_coding MGP_LPJ_T0043109.1 MGP_LPJ_G0022446.1 mouse_genomes_project 16 11305406 11337338 + MGP_LPJ_P0043109 Abcc1 protein_coding protein_coding MGP_LPJ_T0043110.1 MGP_LPJ_G0022446.1 mouse_genomes_project 16 11339847 11340222 + Abcc1 protein_coding processed_transcript MGP_LPJ_T0043111.1 MGP_LPJ_G0022446.1 mouse_genomes_project 16 11348122 11366463 + Abcc1 protein_coding retained_intron MGP_LPJ_T0043112.1 MGP_LPJ_G0022446.1 mouse_genomes_project 16 11409591 11418415 + Abcc1 protein_coding retained_intron MGP_LPJ_T0043113.1 MGP_LPJ_G0022446.1 mouse_genomes_project 16 11409596 11424221 + Abcc1 protein_coding retained_intron MGP_LPJ_T0013122.1 MGP_LPJ_G0011213.1 mouse_genomes_project 16 10957204 10958311 - processed_pseudogene processed_pseudogene MGP_LPJ_T0044034.1 MGP_LPJ_G0022662.1 mouse_genomes_project 16 31920161 31932412 - MGP_LPJ_P0044034 Umps protein_coding protein_coding MGP_LPJ_T0044035.1 MGP_LPJ_G0022662.1 mouse_genomes_project 16 31920173 31932377 - MGP_LPJ_P0044035 Umps protein_coding nonsense_mediated_decay MGP_LPJ_T0042969.1 MGP_LPJ_G0022413.1 mouse_genomes_project 16 7567610 7568330 - MGP_LPJ_P0042969 Tnp2 protein_coding protein_coding MGP_LPJ_T0044964.1 MGP_LPJ_G0022951.1 mouse_genomes_project 16 92405173 92412341 - MGP_LPJ_P0044964 Donson protein_coding protein_coding MGP_LPJ_T0044965.1 MGP_LPJ_G0022951.1 mouse_genomes_project 16 92407170 92416671 - Donson protein_coding retained_intron MGP_LPJ_T0044966.1 MGP_LPJ_G0022951.1 mouse_genomes_project 16 92407170 92416671 - MGP_LPJ_P0044966 Donson protein_coding nonsense_mediated_decay MGP_LPJ_T0044967.1 MGP_LPJ_G0022951.1 mouse_genomes_project 16 92407170 92416671 - MGP_LPJ_P0044967 Donson protein_coding protein_coding MGP_LPJ_T0044968.1 MGP_LPJ_G0022951.1 mouse_genomes_project 16 92407427 92415777 - MGP_LPJ_P0044968 Donson protein_coding nonsense_mediated_decay MGP_LPJ_T0044969.1 MGP_LPJ_G0022951.1 mouse_genomes_project 16 92407427 92416623 - MGP_LPJ_P0044969 Donson protein_coding nonsense_mediated_decay MGP_LPJ_T0044970.1 MGP_LPJ_G0022951.1 mouse_genomes_project 16 92407427 92415777 - MGP_LPJ_P0044970 Donson protein_coding nonsense_mediated_decay MGP_LPJ_T0044971.1 MGP_LPJ_G0022951.1 mouse_genomes_project 16 92407733 92416609 - MGP_LPJ_P0044971 Donson protein_coding protein_coding MGP_LPJ_T0044972.1 MGP_LPJ_G0022951.1 mouse_genomes_project 16 92407794 92416618 - MGP_LPJ_P0044972 Donson protein_coding protein_coding MGP_LPJ_T0044571.1 MGP_LPJ_G0022801.1 mouse_genomes_project 16 56315320 56534192 + MGP_LPJ_P0044571 Filip1l protein_coding protein_coding MGP_LPJ_T0044572.1 MGP_LPJ_G0022801.1 mouse_genomes_project 16 56315504 56476874 + MGP_LPJ_P0044572 Filip1l protein_coding protein_coding MGP_LPJ_T0044573.1 MGP_LPJ_G0022801.1 mouse_genomes_project 16 56510531 56533870 + MGP_LPJ_P0044573 Filip1l protein_coding protein_coding MGP_LPJ_T0010136.1 MGP_LPJ_G0008254.1 mouse_genomes_project 16 15321341 15321406 - Mir185 miRNA miRNA MGP_LPJ_T0003669.1 MGP_LPJ_G0003324.1 mouse_genomes_project 16 15581317 15604000 + 4930588K23Rik antisense antisense MGP_LPJ_T0100414.1 MGP_LPJ_G0038677.1 mouse_genomes_project 16 15231844 15231970 - Gm25777 snoRNA snoRNA MGP_LPJ_T0003656.1 MGP_LPJ_G0003313.1 mouse_genomes_project 16 498509 503190 - Gm15879 antisense antisense MGP_LPJ_T0003657.1 MGP_LPJ_G0003313.1 mouse_genomes_project 16 500041 503518 - Gm15879 antisense antisense MGP_LPJ_T0045072.1 MGP_LPJ_G0022973.1 mouse_genomes_project 16 95230925 95240193 + MGP_LPJ_P0045072 Ripply3 protein_coding protein_coding MGP_LPJ_T0044853.1 MGP_LPJ_G0022925.1 mouse_genomes_project 16 90040774 90041394 - MGP_LPJ_P0044853 Krtap7-1 protein_coding protein_coding MGP_LPJ_T0044836.1 MGP_LPJ_G0022910.1 mouse_genomes_project 16 89527249 89527819 + MGP_LPJ_P0044836 Gm10229 protein_coding protein_coding MGP_LPJ_T0100419.1 MGP_LPJ_G0038682.1 mouse_genomes_project 16 20463092 20463217 + Gm24201 snoRNA snoRNA MGP_LPJ_T0000046.1 MGP_LPJ_G0000038.1 mouse_genomes_project 16 16225423 16225461 - MGP_LPJ_P0000046 Iglj2 IG_J_gene IG_J_gene MGP_LPJ_T0100452.1 MGP_LPJ_G0038715.1 mouse_genomes_project 16 80113907 80114023 + Gm23083 snoRNA snoRNA MGP_LPJ_T0044744.1 MGP_LPJ_G0022869.1 mouse_genomes_project 16 78838771 78974090 - MGP_LPJ_P0044744 Tmprss15 protein_coding protein_coding MGP_LPJ_T0044745.1 MGP_LPJ_G0022869.1 mouse_genomes_project 16 78839227 78974095 - MGP_LPJ_P0044745 Tmprss15 protein_coding protein_coding MGP_LPJ_T0013112.1 MGP_LPJ_G0011203.1 mouse_genomes_project 16 5263108 5263634 - processed_pseudogene processed_pseudogene MGP_LPJ_T0043748.1 MGP_LPJ_G0022592.1 mouse_genomes_project 16 22743091 22885382 + MGP_LPJ_P0043748 Tprg protein_coding protein_coding MGP_LPJ_T0043749.1 MGP_LPJ_G0022592.1 mouse_genomes_project 16 22743095 22775670 + Tprg protein_coding retained_intron MGP_LPJ_T0044819.1 MGP_LPJ_G0022895.1 mouse_genomes_project 16 89248308 89249917 - MGP_LPJ_P0044819 Krtap13 protein_coding protein_coding MGP_LPJ_T0044298.1 MGP_LPJ_G0022729.1 mouse_genomes_project 16 42065526 42082595 - MGP_LPJ_P0044298 Tigit protein_coding protein_coding MGP_LPJ_T0010144.1 MGP_LPJ_G0008262.1 mouse_genomes_project 16 20463463 20463569 + miRNA miRNA MGP_LPJ_T0010147.1 MGP_LPJ_G0008265.1 mouse_genomes_project 16 29028247 29028342 + Gm27415 miRNA miRNA MGP_LPJ_T0010174.1 MGP_LPJ_G0008292.1 mouse_genomes_project 16 84973265 84973330 + Mir155 miRNA miRNA MGP_LPJ_T0010171.1 MGP_LPJ_G0008289.1 mouse_genomes_project 16 77469152 77469246 + Mirlet7c-1 miRNA miRNA MGP_LPJ_T0043124.1 MGP_LPJ_G0022454.1 mouse_genomes_project 16 12731408 12746311 - MGP_LPJ_P0043124 Mzt2 protein_coding protein_coding MGP_LPJ_T0043125.1 MGP_LPJ_G0022454.1 mouse_genomes_project 16 12731410 12745686 - Mzt2 protein_coding retained_intron MGP_LPJ_T0043126.1 MGP_LPJ_G0022454.1 mouse_genomes_project 16 12731417 12746333 - MGP_LPJ_P0043126 Mzt2 protein_coding protein_coding MGP_LPJ_T0043635.1 MGP_LPJ_G0022560.1 mouse_genomes_project 16 18365230 18383785 + MGP_LPJ_P0043635 Ephb3 protein_coding protein_coding MGP_LPJ_T0043636.1 MGP_LPJ_G0022560.1 mouse_genomes_project 16 18371570 18383448 + MGP_LPJ_P0043636 Ephb3 protein_coding nonsense_mediated_decay MGP_LPJ_T0043637.1 MGP_LPJ_G0022560.1 mouse_genomes_project 16 18377297 18383786 + Ephb3 protein_coding retained_intron MGP_LPJ_T0043638.1 MGP_LPJ_G0022560.1 mouse_genomes_project 16 18382166 18383168 + Ephb3 protein_coding retained_intron MGP_LPJ_T0044464.1 MGP_LPJ_G0022771.1 mouse_genomes_project 16 47503345 47505236 + MGP_LPJ_P0044464 Retnlg protein_coding protein_coding MGP_LPJ_T0044445.1 MGP_LPJ_G0022762.1 mouse_genomes_project 16 44599030 44688386 - MGP_LPJ_P0044445 Cd96 protein_coding protein_coding MGP_LPJ_T0043121.1 MGP_LPJ_G0022452.1 mouse_genomes_project 16 12488003 12501473 - MGP_LPJ_P0043121 Mcm4 protein_coding protein_coding MGP_LPJ_T0043544.1 MGP_LPJ_G0022546.1 mouse_genomes_project 16 17604312 17613735 + MGP_LPJ_P0043544 Ap2m1 protein_coding protein_coding MGP_LPJ_T0043545.1 MGP_LPJ_G0022546.1 mouse_genomes_project 16 17604314 17614588 + MGP_LPJ_P0043545 Ap2m1 protein_coding protein_coding MGP_LPJ_T0043546.1 MGP_LPJ_G0022546.1 mouse_genomes_project 16 17604383 17606674 + Ap2m1 protein_coding retained_intron MGP_LPJ_T0043547.1 MGP_LPJ_G0022546.1 mouse_genomes_project 16 17608811 17611952 + Ap2m1 protein_coding processed_transcript MGP_LPJ_T0043548.1 MGP_LPJ_G0022546.1 mouse_genomes_project 16 17609457 17610831 + Ap2m1 protein_coding retained_intron MGP_LPJ_T0043549.1 MGP_LPJ_G0022546.1 mouse_genomes_project 16 17609587 17610706 + Ap2m1 protein_coding retained_intron MGP_LPJ_T0043550.1 MGP_LPJ_G0022546.1 mouse_genomes_project 16 17609807 17610509 + Ap2m1 protein_coding retained_intron MGP_LPJ_T0043551.1 MGP_LPJ_G0022546.1 mouse_genomes_project 16 17610738 17613383 + Ap2m1 protein_coding retained_intron MGP_LPJ_T0043552.1 MGP_LPJ_G0022546.1 mouse_genomes_project 16 17610870 17612389 + Ap2m1 protein_coding retained_intron MGP_LPJ_T0043553.1 MGP_LPJ_G0022546.1 mouse_genomes_project 16 17612197 17613350 + Ap2m1 protein_coding retained_intron MGP_LPJ_T0013160.1 MGP_LPJ_G0011251.1 mouse_genomes_project 16 36906099 36906654 - processed_pseudogene processed_pseudogene MGP_LPJ_T0044973.1 MGP_LPJ_G0022952.1 mouse_genomes_project 16 92412303 92666226 - MGP_LPJ_P0044973 Atp5o protein_coding protein_coding MGP_LPJ_T0045011.1 MGP_LPJ_G0022952.1 mouse_genomes_project 16 92664457 92670929 - MGP_LPJ_P0045011 Atp5o protein_coding protein_coding MGP_LPJ_T0045012.1 MGP_LPJ_G0022952.1 mouse_genomes_project 16 92664462 92665928 - Atp5o protein_coding retained_intron MGP_LPJ_T0045013.1 MGP_LPJ_G0022952.1 mouse_genomes_project 16 92664464 92670790 - MGP_LPJ_P0045013 Atp5o protein_coding nonsense_mediated_decay MGP_LPJ_T0045014.1 MGP_LPJ_G0022952.1 mouse_genomes_project 16 92664556 92670518 - Atp5o protein_coding processed_transcript MGP_LPJ_T0045015.1 MGP_LPJ_G0022952.1 mouse_genomes_project 16 92666102 92670662 - Atp5o protein_coding processed_transcript MGP_LPJ_T0045016.1 MGP_LPJ_G0022952.1 mouse_genomes_project 16 92667404 92670795 - Atp5o protein_coding retained_intron MGP_LPJ_T0044446.1 MGP_LPJ_G0022763.1 mouse_genomes_project 16 44962418 45075986 - MGP_LPJ_P0044446 Nectin3 protein_coding protein_coding MGP_LPJ_T0044447.1 MGP_LPJ_G0022763.1 mouse_genomes_project 16 44969570 44986174 - MGP_LPJ_P0044447 Nectin3 protein_coding protein_coding MGP_LPJ_T0044448.1 MGP_LPJ_G0022763.1 mouse_genomes_project 16 44969617 44986230 - MGP_LPJ_P0044448 Nectin3 protein_coding protein_coding MGP_LPJ_T0044449.1 MGP_LPJ_G0022763.1 mouse_genomes_project 16 44969701 45023928 - MGP_LPJ_P0044449 Nectin3 protein_coding protein_coding MGP_LPJ_T0044450.1 MGP_LPJ_G0022763.1 mouse_genomes_project 16 44970155 45013343 - MGP_LPJ_P0044450 Nectin3 protein_coding protein_coding MGP_LPJ_T0044451.1 MGP_LPJ_G0022763.1 mouse_genomes_project 16 45011266 45075871 - MGP_LPJ_P0044451 Nectin3 protein_coding protein_coding MGP_LPJ_T0044452.1 MGP_LPJ_G0022763.1 mouse_genomes_project 16 45011678 45013921 - Nectin3 protein_coding retained_intron MGP_LPJ_T0044453.1 MGP_LPJ_G0022763.1 mouse_genomes_project 16 45022586 45075986 - MGP_LPJ_P0044453 Nectin3 protein_coding protein_coding MGP_LPJ_T0044454.1 MGP_LPJ_G0022763.1 mouse_genomes_project 16 45031101 45075791 - MGP_LPJ_P0044454 Nectin3 protein_coding protein_coding MGP_LPJ_T0044455.1 MGP_LPJ_G0022763.1 mouse_genomes_project 16 45035291 45077544 - Nectin3 protein_coding processed_transcript MGP_LPJ_T0042941.1 MGP_LPJ_G0022407.1 mouse_genomes_project 16 7164912 7177386 + MGP_LPJ_P0042941 Nubp1 protein_coding protein_coding MGP_LPJ_T0042942.1 MGP_LPJ_G0022407.1 mouse_genomes_project 16 7164913 7174630 + Nubp1 protein_coding processed_transcript MGP_LPJ_T0042943.1 MGP_LPJ_G0022407.1 mouse_genomes_project 16 7164918 7173509 + Nubp1 protein_coding retained_intron MGP_LPJ_T0042944.1 MGP_LPJ_G0022407.1 mouse_genomes_project 16 7164934 7177386 + Nubp1 protein_coding retained_intron MGP_LPJ_T0042945.1 MGP_LPJ_G0022407.1 mouse_genomes_project 16 7165028 7174395 + Nubp1 protein_coding retained_intron MGP_LPJ_T0042947.1 MGP_LPJ_G0022407.1 mouse_genomes_project 16 7174193 7176304 + Nubp1 protein_coding processed_transcript MGP_LPJ_T0044207.1 MGP_LPJ_G0022706.1 mouse_genomes_project 16 36026300 36031814 - Gm36028 protein_coding retained_intron MGP_LPJ_T0044208.1 MGP_LPJ_G0022706.1 mouse_genomes_project 16 36026300 36036835 - MGP_LPJ_P0044208 Gm36028 protein_coding protein_coding MGP_LPJ_T0045073.1 MGP_LPJ_G0022974.1 mouse_genomes_project 16 95260704 95273646 - MGP_LPJ_P0045073 Pigp protein_coding protein_coding MGP_LPJ_T0045074.1 MGP_LPJ_G0022974.1 mouse_genomes_project 16 95267822 95274050 - MGP_LPJ_P0045074 Pigp protein_coding protein_coding MGP_LPJ_T0045075.1 MGP_LPJ_G0022974.1 mouse_genomes_project 16 95267822 95274371 - MGP_LPJ_P0045075 Pigp protein_coding protein_coding MGP_LPJ_T0045076.1 MGP_LPJ_G0022974.1 mouse_genomes_project 16 95267822 95274068 - MGP_LPJ_P0045076 Pigp protein_coding protein_coding MGP_LPJ_T0045077.1 MGP_LPJ_G0022974.1 mouse_genomes_project 16 95267822 95274371 - MGP_LPJ_P0045077 Pigp protein_coding protein_coding MGP_LPJ_T0045078.1 MGP_LPJ_G0022974.1 mouse_genomes_project 16 95267827 95268877 - Pigp protein_coding processed_transcript MGP_LPJ_T0045079.1 MGP_LPJ_G0022974.1 mouse_genomes_project 16 95268067 95273866 - MGP_LPJ_P0045079 Pigp protein_coding protein_coding MGP_LPJ_T0043787.1 MGP_LPJ_G0022606.1 mouse_genomes_project 16 26864751 27022991 - MGP_LPJ_P0043787 Atp13a5 protein_coding protein_coding MGP_LPJ_T0043788.1 MGP_LPJ_G0022606.1 mouse_genomes_project 16 26864814 27022965 - MGP_LPJ_P0043788 Atp13a5 protein_coding nonsense_mediated_decay MGP_LPJ_T0043789.1 MGP_LPJ_G0022606.1 mouse_genomes_project 16 26865360 27022926 - MGP_LPJ_P0043789 Atp13a5 protein_coding protein_coding MGP_LPJ_T0043790.1 MGP_LPJ_G0022606.1 mouse_genomes_project 16 26971049 27022842 - MGP_LPJ_P0043790 Atp13a5 protein_coding protein_coding MGP_LPJ_T0043538.1 MGP_LPJ_G0022544.1 mouse_genomes_project 16 17561246 17575458 + MGP_LPJ_P0043538 Eif2b5 protein_coding protein_coding MGP_LPJ_T0043539.1 MGP_LPJ_G0022544.1 mouse_genomes_project 16 17570264 17574826 + MGP_LPJ_P0043539 Eif2b5 protein_coding protein_coding MGP_LPJ_T0101286.1 MGP_LPJ_G0039515.1 mouse_genomes_project 16 95260882 95261240 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0042934.1 MGP_LPJ_G0022404.1 mouse_genomes_project 16 6932569 6985958 + MGP_LPJ_P0042934 Atf7ip2 protein_coding protein_coding MGP_LPJ_T0042935.1 MGP_LPJ_G0022404.1 mouse_genomes_project 16 6932763 6979650 + MGP_LPJ_P0042935 Atf7ip2 protein_coding protein_coding MGP_LPJ_T0042936.1 MGP_LPJ_G0022404.1 mouse_genomes_project 16 6932779 6983721 + MGP_LPJ_P0042936 Atf7ip2 protein_coding protein_coding MGP_LPJ_T0042937.1 MGP_LPJ_G0022404.1 mouse_genomes_project 16 6932804 6960707 + Atf7ip2 protein_coding retained_intron MGP_LPJ_T0044233.1 MGP_LPJ_G0022717.1 mouse_genomes_project 16 36668140 36698144 + MGP_LPJ_P0044233 Cd80 protein_coding protein_coding MGP_LPJ_T0044941.1 MGP_LPJ_G0022947.1 mouse_genomes_project 16 92301177 92325875 - MGP_LPJ_P0044941 Tmem50b protein_coding protein_coding MGP_LPJ_T0044942.1 MGP_LPJ_G0022947.1 mouse_genomes_project 16 92302432 92325739 - MGP_LPJ_P0044942 Tmem50b protein_coding nonsense_mediated_decay MGP_LPJ_T0044943.1 MGP_LPJ_G0022947.1 mouse_genomes_project 16 92306874 92325875 - MGP_LPJ_P0044943 Tmem50b protein_coding nonsense_mediated_decay MGP_LPJ_T0043832.1 MGP_LPJ_G0022616.1 mouse_genomes_project 16 28292356 28319466 - MGP_LPJ_P0043832 Lsg1 protein_coding protein_coding MGP_LPJ_T0043833.1 MGP_LPJ_G0022616.1 mouse_genomes_project 16 28293233 28319463 - MGP_LPJ_P0043833 Lsg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0043834.1 MGP_LPJ_G0022616.1 mouse_genomes_project 16 28296540 28319437 - Lsg1 protein_coding retained_intron MGP_LPJ_T0043835.1 MGP_LPJ_G0022616.1 mouse_genomes_project 16 28296892 28299974 - Lsg1 protein_coding retained_intron MGP_LPJ_T0043836.1 MGP_LPJ_G0022616.1 mouse_genomes_project 16 28299877 28319466 - Lsg1 protein_coding retained_intron MGP_LPJ_T0043837.1 MGP_LPJ_G0022616.1 mouse_genomes_project 16 28303194 28317524 - MGP_LPJ_P0043837 Lsg1 protein_coding protein_coding MGP_LPJ_T0043838.1 MGP_LPJ_G0022616.1 mouse_genomes_project 16 28305174 28319448 - Lsg1 protein_coding retained_intron MGP_LPJ_T0043839.1 MGP_LPJ_G0022616.1 mouse_genomes_project 16 28314106 28319413 - Lsg1 protein_coding retained_intron MGP_LPJ_T0044626.1 MGP_LPJ_G0022820.1 mouse_genomes_project 16 58124891 58136868 - MGP_LPJ_P0044626 Olfr191 protein_coding protein_coding MGP_LPJ_T0043559.1 MGP_LPJ_G0022548.1 mouse_genomes_project 16 17657349 17667710 + MGP_LPJ_P0043559 Vwa5b2 protein_coding protein_coding MGP_LPJ_T0043560.1 MGP_LPJ_G0022548.1 mouse_genomes_project 16 17657460 17658615 + Vwa5b2 protein_coding processed_transcript MGP_LPJ_T0043561.1 MGP_LPJ_G0022548.1 mouse_genomes_project 16 17657460 17674622 + MGP_LPJ_P0043561 Vwa5b2 protein_coding protein_coding MGP_LPJ_T0043562.1 MGP_LPJ_G0022548.1 mouse_genomes_project 16 17657462 17659065 + Vwa5b2 protein_coding processed_transcript MGP_LPJ_T0043563.1 MGP_LPJ_G0022548.1 mouse_genomes_project 16 17657729 17659099 + Vwa5b2 protein_coding retained_intron MGP_LPJ_T0043564.1 MGP_LPJ_G0022548.1 mouse_genomes_project 16 17657922 17674628 + MGP_LPJ_P0043564 Vwa5b2 protein_coding unknown_likely_coding MGP_LPJ_T0043565.1 MGP_LPJ_G0022548.1 mouse_genomes_project 16 17657937 17658410 + Vwa5b2 protein_coding retained_intron MGP_LPJ_T0043566.1 MGP_LPJ_G0022548.1 mouse_genomes_project 16 17657968 17660268 + Vwa5b2 protein_coding retained_intron MGP_LPJ_T0043567.1 MGP_LPJ_G0022548.1 mouse_genomes_project 16 17658024 17667705 + MGP_LPJ_P0043567 Vwa5b2 protein_coding nonsense_mediated_decay MGP_LPJ_T0043568.1 MGP_LPJ_G0022548.1 mouse_genomes_project 16 17659034 17674619 + MGP_LPJ_P0043568 Vwa5b2 protein_coding protein_coding MGP_LPJ_T0043569.1 MGP_LPJ_G0022548.1 mouse_genomes_project 16 17672017 17674622 + Vwa5b2 protein_coding retained_intron MGP_LPJ_T0044922.1 MGP_LPJ_G0022942.1 mouse_genomes_project 16 92085070 92106053 + MGP_LPJ_P0044922 Ifnar2 protein_coding protein_coding MGP_LPJ_T0044923.1 MGP_LPJ_G0022942.1 mouse_genomes_project 16 92085079 92106230 + MGP_LPJ_P0044923 Ifnar2 protein_coding protein_coding MGP_LPJ_T0044924.1 MGP_LPJ_G0022942.1 mouse_genomes_project 16 92085177 92119099 + MGP_LPJ_P0044924 Ifnar2 protein_coding protein_coding MGP_LPJ_T0044925.1 MGP_LPJ_G0022942.1 mouse_genomes_project 16 92099980 92103966 + MGP_LPJ_P0044925 Ifnar2 protein_coding protein_coding MGP_LPJ_T0013113.1 MGP_LPJ_G0011204.1 mouse_genomes_project 16 5303448 5306851 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010173.1 MGP_LPJ_G0008291.1 mouse_genomes_project 16 77942549 77942660 + Gm25025 miRNA miRNA MGP_LPJ_T0011420.1 MGP_LPJ_G0009538.1 mouse_genomes_project 16 4804116 4804390 + Gm23476 misc_RNA misc_RNA MGP_LPJ_T0042791.1 MGP_LPJ_G0022367.1 mouse_genomes_project 16 1097691 1119578 + MGP_LPJ_P0042791 Glis2 protein_coding protein_coding MGP_LPJ_T0042792.1 MGP_LPJ_G0022367.1 mouse_genomes_project 16 1104141 1114034 + MGP_LPJ_P0042792 Glis2 protein_coding protein_coding MGP_LPJ_T0042793.1 MGP_LPJ_G0022367.1 mouse_genomes_project 16 1112292 1119563 + Glis2 protein_coding retained_intron MGP_LPJ_T0042794.1 MGP_LPJ_G0022367.1 mouse_genomes_project 16 1115030 1117277 + Glis2 protein_coding retained_intron MGP_LPJ_T0042795.1 MGP_LPJ_G0022367.1 mouse_genomes_project 16 1115248 1129877 + Glis2 protein_coding processed_transcript MGP_LPJ_T0043379.1 MGP_LPJ_G0022504.1 mouse_genomes_project 16 15209198 15210342 + MGP_LPJ_P0043379 Ccdc188 protein_coding protein_coding MGP_LPJ_T0099193.1 MGP_LPJ_G0037456.1 mouse_genomes_project 16 61821252 61821356 + Gm24164 snRNA snRNA MGP_LPJ_T0043344.1 MGP_LPJ_G0022493.1 mouse_genomes_project 16 14799885 14861946 - protein_coding retained_intron MGP_LPJ_T0043345.1 MGP_LPJ_G0022493.1 mouse_genomes_project 16 14800758 14861952 - MGP_LPJ_P0043345 protein_coding protein_coding MGP_LPJ_T0043346.1 MGP_LPJ_G0022493.1 mouse_genomes_project 16 14800758 14861985 - MGP_LPJ_P0043346 protein_coding protein_coding MGP_LPJ_T0043347.1 MGP_LPJ_G0022493.1 mouse_genomes_project 16 14800764 14861949 - MGP_LPJ_P0043347 protein_coding protein_coding MGP_LPJ_T0043348.1 MGP_LPJ_G0022493.1 mouse_genomes_project 16 14801713 14861885 - MGP_LPJ_P0043348 protein_coding protein_coding MGP_LPJ_T0043349.1 MGP_LPJ_G0022493.1 mouse_genomes_project 16 14809714 14861941 - protein_coding retained_intron MGP_LPJ_T0043350.1 MGP_LPJ_G0022493.1 mouse_genomes_project 16 14822765 14864391 - protein_coding processed_transcript MGP_LPJ_T0043351.1 MGP_LPJ_G0022493.1 mouse_genomes_project 16 14862866 14864437 - protein_coding processed_transcript MGP_LPJ_T0010155.1 MGP_LPJ_G0008273.1 mouse_genomes_project 16 42056216 42056299 + Mir568 miRNA miRNA MGP_LPJ_T0042719.1 MGP_LPJ_G0022353.1 mouse_genomes_project 16 299832 311485 + MGP_LPJ_P0042719 Zfp174 protein_coding protein_coding MGP_LPJ_T0043877.1 MGP_LPJ_G0022624.1 mouse_genomes_project 16 29670601 29690925 + MGP_LPJ_P0043877 Mfi2 protein_coding protein_coding MGP_LPJ_T0101908.1 MGP_LPJ_G0039945.1 mouse_genomes_project 16 34234405 34237209 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0100418.1 MGP_LPJ_G0038681.1 mouse_genomes_project 16 20461662 20461731 + Snord2 snoRNA snoRNA MGP_LPJ_T0044822.1 MGP_LPJ_G0022898.1 mouse_genomes_project 16 89279682 89281340 + MGP_LPJ_P0044822 Gm5965 protein_coding protein_coding MGP_LPJ_T0006893.1 MGP_LPJ_G0005682.1 mouse_genomes_project 16 92027313 92035857 - Gm15966 lincRNA lincRNA MGP_LPJ_T0006894.1 MGP_LPJ_G0005682.1 mouse_genomes_project 16 92027538 92032622 - Gm15966 lincRNA lincRNA MGP_LPJ_T0000151.1 MGP_LPJ_G0000112.1 mouse_genomes_project 16 16288474 16289274 - MGP_LPJ_P0000151 Iglv2 IG_V_gene IG_V_gene MGP_LPJ_T0000152.1 MGP_LPJ_G0000112.1 mouse_genomes_project 16 16288474 16289289 - MGP_LPJ_P0000152 Iglv2 IG_V_gene IG_V_gene MGP_LPJ_T0043494.1 MGP_LPJ_G0022535.1 mouse_genomes_project 16 16805639 16817739 + MGP_LPJ_P0043494 B3gnt5 protein_coding protein_coding MGP_LPJ_T0043495.1 MGP_LPJ_G0022535.1 mouse_genomes_project 16 16805665 16818259 + MGP_LPJ_P0043495 B3gnt5 protein_coding protein_coding MGP_LPJ_T0043496.1 MGP_LPJ_G0022535.1 mouse_genomes_project 16 16805665 16817969 + MGP_LPJ_P0043496 B3gnt5 protein_coding protein_coding MGP_LPJ_T0043497.1 MGP_LPJ_G0022535.1 mouse_genomes_project 16 16805830 16811128 + B3gnt5 protein_coding processed_transcript MGP_LPJ_T0043498.1 MGP_LPJ_G0022535.1 mouse_genomes_project 16 16806017 16814344 + B3gnt5 protein_coding retained_intron MGP_LPJ_T0043499.1 MGP_LPJ_G0022535.1 mouse_genomes_project 16 16806018 16809861 + B3gnt5 protein_coding retained_intron MGP_LPJ_T0043500.1 MGP_LPJ_G0022535.1 mouse_genomes_project 16 16806485 16816130 + MGP_LPJ_P0043500 B3gnt5 protein_coding protein_coding MGP_LPJ_T0043740.1 MGP_LPJ_G0022587.1 mouse_genomes_project 16 20989511 20993697 + MGP_LPJ_P0043740 Rtp4 protein_coding protein_coding MGP_LPJ_T0043484.1 MGP_LPJ_G0022526.1 mouse_genomes_project 16 16431012 16432052 - MGP_LPJ_P0043484 Olfr165 protein_coding protein_coding MGP_LPJ_T0043486.1 MGP_LPJ_G0022526.1 mouse_genomes_project 16 16431608 16453648 - MGP_LPJ_P0043486 Olfr165 protein_coding protein_coding MGP_LPJ_T0098189.1 MGP_LPJ_G0036470.1 mouse_genomes_project 16 39516025 39516117 + Gm26381 rRNA rRNA MGP_LPJ_T0003702.1 MGP_LPJ_G0003349.1 mouse_genomes_project 16 66314874 66324479 + 4933411O13Rik antisense antisense MGP_LPJ_T0003703.1 MGP_LPJ_G0003349.1 mouse_genomes_project 16 66314880 66335044 + 4933411O13Rik antisense antisense MGP_LPJ_T0003700.1 MGP_LPJ_G0003348.1 mouse_genomes_project 16 59745935 59752291 + Gm9017 antisense antisense MGP_LPJ_T0003701.1 MGP_LPJ_G0003348.1 mouse_genomes_project 16 59746924 59752571 + Gm9017 antisense antisense MGP_LPJ_T0043451.1 MGP_LPJ_G0022516.1 mouse_genomes_project 16 15614384 15616469 - MGP_LPJ_P0043451 Gp1bb protein_coding protein_coding MGP_LPJ_T0043452.1 MGP_LPJ_G0022516.1 mouse_genomes_project 16 15614787 15615432 - MGP_LPJ_P0043452 Gp1bb protein_coding protein_coding MGP_LPJ_T0006856.1 MGP_LPJ_G0005655.1 mouse_genomes_project 16 27472382 27502363 + Gm26834 lincRNA lincRNA MGP_LPJ_T0000042.1 MGP_LPJ_G0000034.1 mouse_genomes_project 16 16084124 16084162 - MGP_LPJ_P0000042 Iglj1 IG_J_gene IG_J_gene MGP_LPJ_T0098505.1 MGP_LPJ_G0036781.1 mouse_genomes_project 16 11256739 11257951 - Gm15869 sense_intronic sense_intronic MGP_LPJ_T0013124.1 MGP_LPJ_G0011215.1 mouse_genomes_project 16 10989027 10989631 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006882.1 MGP_LPJ_G0005675.1 mouse_genomes_project 16 69405955 69410098 - Gm43265 lincRNA lincRNA MGP_LPJ_T0013174.1 MGP_LPJ_G0011265.1 mouse_genomes_project 16 55711832 55712469 + processed_pseudogene processed_pseudogene MGP_LPJ_T0044456.1 MGP_LPJ_G0022764.1 mouse_genomes_project 16 46653581 46658849 + MGP_LPJ_P0044456 Gm12790 protein_coding protein_coding MGP_LPJ_T0010151.1 MGP_LPJ_G0008269.1 mouse_genomes_project 16 34910755 34910825 + Gm22617 miRNA miRNA MGP_LPJ_T0010176.1 MGP_LPJ_G0008294.1 mouse_genomes_project 16 92249232 92249334 - Mir6367 miRNA miRNA MGP_LPJ_T0042946.1 MGP_LPJ_G0022408.1 mouse_genomes_project 16 7173514 7205539 - MGP_LPJ_P0042946 Tvp23a protein_coding protein_coding MGP_LPJ_T0042948.1 MGP_LPJ_G0022408.1 mouse_genomes_project 16 7176201 7205322 - MGP_LPJ_P0042948 Tvp23a protein_coding nonsense_mediated_decay MGP_LPJ_T0042949.1 MGP_LPJ_G0022408.1 mouse_genomes_project 16 7177168 7205504 - Tvp23a protein_coding processed_transcript MGP_LPJ_T0042950.1 MGP_LPJ_G0022408.1 mouse_genomes_project 16 7178812 7182123 - Tvp23a protein_coding processed_transcript MGP_LPJ_T0042951.1 MGP_LPJ_G0022408.1 mouse_genomes_project 16 7179988 7182199 - Tvp23a protein_coding processed_transcript MGP_LPJ_T0044633.1 MGP_LPJ_G0022826.1 mouse_genomes_project 16 58285484 58286415 - MGP_LPJ_P0044633 protein_coding protein_coding MGP_LPJ_T0098508.1 MGP_LPJ_G0036784.1 mouse_genomes_project 16 92844375 92846296 + Gm16310 sense_intronic sense_intronic MGP_LPJ_T0043279.1 MGP_LPJ_G0022482.1 mouse_genomes_project 16 14446380 14449535 - MGP_LPJ_P0043279 Thap7 protein_coding protein_coding MGP_LPJ_T0043280.1 MGP_LPJ_G0022482.1 mouse_genomes_project 16 14446584 14449511 - Thap7 protein_coding retained_intron MGP_LPJ_T0043281.1 MGP_LPJ_G0022482.1 mouse_genomes_project 16 14446648 14449451 - Thap7 protein_coding retained_intron MGP_LPJ_T0043282.1 MGP_LPJ_G0022482.1 mouse_genomes_project 16 14446742 14449080 - Thap7 protein_coding retained_intron MGP_LPJ_T0043283.1 MGP_LPJ_G0022482.1 mouse_genomes_project 16 14446899 14447547 - Thap7 protein_coding retained_intron MGP_LPJ_T0043284.1 MGP_LPJ_G0022482.1 mouse_genomes_project 16 14446980 14449454 - MGP_LPJ_P0043284 Thap7 protein_coding protein_coding MGP_LPJ_T0043285.1 MGP_LPJ_G0022482.1 mouse_genomes_project 16 14447401 14449055 - Thap7 protein_coding retained_intron MGP_LPJ_T0017470.1 MGP_LPJ_G0015247.1 mouse_genomes_project 16 92670480 92704538 + D430001F17Rik processed_transcript processed_transcript MGP_LPJ_T0013191.1 MGP_LPJ_G0011282.1 mouse_genomes_project 16 92262903 92263782 - processed_pseudogene processed_pseudogene MGP_LPJ_T0044014.1 MGP_LPJ_G0022655.1 mouse_genomes_project 16 31106132 31168910 + MGP_LPJ_P0044014 Osbpl11 protein_coding protein_coding MGP_LPJ_T0044318.1 MGP_LPJ_G0022734.1 mouse_genomes_project 16 42415284 42451374 - MGP_LPJ_P0044318 Gramd1c protein_coding protein_coding MGP_LPJ_T0044319.1 MGP_LPJ_G0022734.1 mouse_genomes_project 16 42415289 42467064 - MGP_LPJ_P0044319 Gramd1c protein_coding protein_coding MGP_LPJ_T0044320.1 MGP_LPJ_G0022734.1 mouse_genomes_project 16 42415289 42454771 - MGP_LPJ_P0044320 Gramd1c protein_coding protein_coding MGP_LPJ_T0044321.1 MGP_LPJ_G0022734.1 mouse_genomes_project 16 42423625 42470268 - MGP_LPJ_P0044321 Gramd1c protein_coding unknown_likely_coding MGP_LPJ_T0044118.1 MGP_LPJ_G0022689.1 mouse_genomes_project 16 34555168 34560028 - MGP_LPJ_P0044118 Stfa3 protein_coding protein_coding MGP_LPJ_T0043245.1 MGP_LPJ_G0022476.1 mouse_genomes_project 16 14180533 14317875 - MGP_LPJ_P0043245 Pi4ka protein_coding protein_coding MGP_LPJ_T0043246.1 MGP_LPJ_G0022476.1 mouse_genomes_project 16 14180534 14181828 - Pi4ka protein_coding retained_intron MGP_LPJ_T0043247.1 MGP_LPJ_G0022476.1 mouse_genomes_project 16 14180534 14185146 - Pi4ka protein_coding retained_intron MGP_LPJ_T0043248.1 MGP_LPJ_G0022476.1 mouse_genomes_project 16 14180534 14209507 - MGP_LPJ_P0043248 Pi4ka protein_coding protein_coding MGP_LPJ_T0043249.1 MGP_LPJ_G0022476.1 mouse_genomes_project 16 14180534 14317454 - MGP_LPJ_P0043249 Pi4ka protein_coding protein_coding MGP_LPJ_T0043250.1 MGP_LPJ_G0022476.1 mouse_genomes_project 16 14180535 14182258 - Pi4ka protein_coding retained_intron MGP_LPJ_T0043251.1 MGP_LPJ_G0022476.1 mouse_genomes_project 16 14183004 14184308 - Pi4ka protein_coding retained_intron MGP_LPJ_T0043252.1 MGP_LPJ_G0022476.1 mouse_genomes_project 16 14198983 14209130 - MGP_LPJ_P0043252 Pi4ka protein_coding nonsense_mediated_decay MGP_LPJ_T0043253.1 MGP_LPJ_G0022476.1 mouse_genomes_project 16 14209618 14227817 - MGP_LPJ_P0043253 Pi4ka protein_coding nonsense_mediated_decay MGP_LPJ_T0043254.1 MGP_LPJ_G0022476.1 mouse_genomes_project 16 14214905 14256992 - MGP_LPJ_P0043254 Pi4ka protein_coding protein_coding MGP_LPJ_T0043255.1 MGP_LPJ_G0022476.1 mouse_genomes_project 16 14225299 14256954 - Pi4ka protein_coding retained_intron MGP_LPJ_T0043258.1 MGP_LPJ_G0022476.1 mouse_genomes_project 16 14270523 14317454 - Pi4ka protein_coding retained_intron MGP_LPJ_T0045021.1 MGP_LPJ_G0022957.1 mouse_genomes_project 16 93059159 93064900 + MGP_LPJ_P0045021 Kcne2 protein_coding protein_coding MGP_LPJ_T0045022.1 MGP_LPJ_G0022957.1 mouse_genomes_project 16 93062386 93064900 + MGP_LPJ_P0045022 Kcne2 protein_coding protein_coding MGP_LPJ_T0099169.1 MGP_LPJ_G0037432.1 mouse_genomes_project 16 23186564 23186671 - Gm24928 snRNA snRNA MGP_LPJ_T0045168.1 MGP_LPJ_G0022984.1 mouse_genomes_project 16 97114103 97120358 - Hmgn1 protein_coding retained_intron MGP_LPJ_T0045169.1 MGP_LPJ_G0022984.1 mouse_genomes_project 16 97114211 97122623 - MGP_LPJ_P0045169 Hmgn1 protein_coding protein_coding MGP_LPJ_T0045170.1 MGP_LPJ_G0022984.1 mouse_genomes_project 16 97114211 97122623 - MGP_LPJ_P0045170 Hmgn1 protein_coding unknown_likely_coding MGP_LPJ_T0045171.1 MGP_LPJ_G0022984.1 mouse_genomes_project 16 97121623 97122485 - Hmgn1 protein_coding retained_intron MGP_LPJ_T0044349.1 MGP_LPJ_G0022740.1 mouse_genomes_project 16 42861889 42871499 + Cfap44 protein_coding retained_intron MGP_LPJ_T0044350.1 MGP_LPJ_G0022740.1 mouse_genomes_project 16 42861892 42956041 + MGP_LPJ_P0044350 Cfap44 protein_coding protein_coding MGP_LPJ_T0044351.1 MGP_LPJ_G0022740.1 mouse_genomes_project 16 42861915 42868560 + Cfap44 protein_coding retained_intron MGP_LPJ_T0044352.1 MGP_LPJ_G0022740.1 mouse_genomes_project 16 42867986 42955707 + MGP_LPJ_P0044352 Cfap44 protein_coding protein_coding MGP_LPJ_T0044353.1 MGP_LPJ_G0022740.1 mouse_genomes_project 16 42875297 42900033 + Cfap44 protein_coding retained_intron MGP_LPJ_T0044354.1 MGP_LPJ_G0022740.1 mouse_genomes_project 16 42902052 42907296 + Cfap44 protein_coding processed_transcript MGP_LPJ_T0044355.1 MGP_LPJ_G0022740.1 mouse_genomes_project 16 42923705 42955707 + MGP_LPJ_P0044355 Cfap44 protein_coding protein_coding MGP_LPJ_T0044356.1 MGP_LPJ_G0022740.1 mouse_genomes_project 16 42942473 42956041 + Cfap44 protein_coding retained_intron MGP_LPJ_T0017471.1 MGP_LPJ_G0015248.1 mouse_genomes_project 16 94173161 94188627 - 1810053B23Rik processed_transcript lincRNA MGP_LPJ_T0017472.1 MGP_LPJ_G0015248.1 mouse_genomes_project 16 94173606 94183085 - 1810053B23Rik processed_transcript lincRNA MGP_LPJ_T0017473.1 MGP_LPJ_G0015248.1 mouse_genomes_project 16 94174161 94183957 - 1810053B23Rik processed_transcript lincRNA MGP_LPJ_T0017474.1 MGP_LPJ_G0015248.1 mouse_genomes_project 16 94174629 94183967 - 1810053B23Rik processed_transcript lincRNA MGP_LPJ_T0017475.1 MGP_LPJ_G0015248.1 mouse_genomes_project 16 94175944 94189458 - 1810053B23Rik processed_transcript retained_intron MGP_LPJ_T0017476.1 MGP_LPJ_G0015248.1 mouse_genomes_project 16 94176683 94189426 - 1810053B23Rik processed_transcript retained_intron MGP_LPJ_T0044157.1 MGP_LPJ_G0022696.1 mouse_genomes_project 16 35002743 35015239 + Golgb1 protein_coding processed_transcript MGP_LPJ_T0044158.1 MGP_LPJ_G0022696.1 mouse_genomes_project 16 35002744 35017040 + MGP_LPJ_P0044158 Golgb1 protein_coding protein_coding MGP_LPJ_T0044159.1 MGP_LPJ_G0022696.1 mouse_genomes_project 16 35002744 35003242 + MGP_LPJ_P0044159 Golgb1 protein_coding protein_coding MGP_LPJ_T0044160.1 MGP_LPJ_G0022696.1 mouse_genomes_project 16 35002771 35060730 + MGP_LPJ_P0044160 Golgb1 protein_coding protein_coding MGP_LPJ_T0044161.1 MGP_LPJ_G0022696.1 mouse_genomes_project 16 35002805 35017042 + MGP_LPJ_P0044161 Golgb1 protein_coding protein_coding MGP_LPJ_T0044162.1 MGP_LPJ_G0022696.1 mouse_genomes_project 16 35013774 35060730 + MGP_LPJ_P0044162 Golgb1 protein_coding protein_coding MGP_LPJ_T0044163.1 MGP_LPJ_G0022696.1 mouse_genomes_project 16 35052101 35056016 + Golgb1 protein_coding retained_intron MGP_LPJ_T0044164.1 MGP_LPJ_G0022696.1 mouse_genomes_project 16 35059044 35059718 + Golgb1 protein_coding retained_intron MGP_LPJ_T0043447.1 MGP_LPJ_G0022514.1 mouse_genomes_project 16 15489576 15492334 + MGP_LPJ_P0043447 Gm16314 protein_coding protein_coding MGP_LPJ_T0045039.1 MGP_LPJ_G0022964.1 mouse_genomes_project 16 94435462 94457811 - MGP_LPJ_P0045039 Setd4 protein_coding unknown_likely_coding MGP_LPJ_T0045040.1 MGP_LPJ_G0022964.1 mouse_genomes_project 16 94435464 94457562 - Setd4 protein_coding retained_intron MGP_LPJ_T0045041.1 MGP_LPJ_G0022964.1 mouse_genomes_project 16 94435465 94440353 - Setd4 protein_coding processed_transcript MGP_LPJ_T0045042.1 MGP_LPJ_G0022964.1 mouse_genomes_project 16 94435467 94441459 - Setd4 protein_coding retained_intron MGP_LPJ_T0045043.1 MGP_LPJ_G0022964.1 mouse_genomes_project 16 94443333 94449850 - Setd4 protein_coding processed_transcript MGP_LPJ_T0045044.1 MGP_LPJ_G0022964.1 mouse_genomes_project 16 94443465 94457835 - Setd4 protein_coding processed_transcript MGP_LPJ_T0045045.1 MGP_LPJ_G0022964.1 mouse_genomes_project 16 94454061 94457586 - Setd4 protein_coding processed_transcript MGP_LPJ_T0011421.1 MGP_LPJ_G0009539.1 mouse_genomes_project 16 5086877 5087166 - Gm25782 misc_RNA misc_RNA MGP_LPJ_T0044750.1 MGP_LPJ_G0022872.1 mouse_genomes_project 16 85035797 85093521 + MGP_LPJ_P0044750 Jam2 protein_coding protein_coding MGP_LPJ_T0044751.1 MGP_LPJ_G0022872.1 mouse_genomes_project 16 85036060 85078589 + MGP_LPJ_P0044751 Jam2 protein_coding protein_coding MGP_LPJ_T0044752.1 MGP_LPJ_G0022872.1 mouse_genomes_project 16 85076999 85090479 + Jam2 protein_coding processed_transcript MGP_LPJ_T0044200.1 MGP_LPJ_G0022704.1 mouse_genomes_project 16 35813031 35820315 - MGP_LPJ_P0044200 Ndufb4 protein_coding protein_coding MGP_LPJ_T0044201.1 MGP_LPJ_G0022704.1 mouse_genomes_project 16 35813462 35815221 - Ndufb4 protein_coding retained_intron MGP_LPJ_T0043225.1 MGP_LPJ_G0022472.1 mouse_genomes_project 16 14047114 14098590 - MGP_LPJ_P0043225 Ube2l3 protein_coding protein_coding MGP_LPJ_T0043226.1 MGP_LPJ_G0022472.1 mouse_genomes_project 16 14047116 14097433 - MGP_LPJ_P0043226 Ube2l3 protein_coding protein_coding MGP_LPJ_T0043227.1 MGP_LPJ_G0022472.1 mouse_genomes_project 16 14047419 14055203 - Ube2l3 protein_coding processed_transcript MGP_LPJ_T0043228.1 MGP_LPJ_G0022472.1 mouse_genomes_project 16 14048411 14097435 - MGP_LPJ_P0043228 Ube2l3 protein_coding protein_coding MGP_LPJ_T0043229.1 MGP_LPJ_G0022472.1 mouse_genomes_project 16 14052424 14097414 - Ube2l3 protein_coding retained_intron MGP_LPJ_T0003688.1 MGP_LPJ_G0003338.1 mouse_genomes_project 16 35008163 35024830 - 4930565N06Rik antisense antisense MGP_LPJ_T0100453.1 MGP_LPJ_G0038716.1 mouse_genomes_project 16 85003641 85003768 + Gm26153 snoRNA snoRNA MGP_LPJ_T0042841.1 MGP_LPJ_G0022376.1 mouse_genomes_project 16 1382629 1388163 - MGP_LPJ_P0042841 Ubald1 protein_coding protein_coding MGP_LPJ_T0042842.1 MGP_LPJ_G0022376.1 mouse_genomes_project 16 1382639 1387654 - Ubald1 protein_coding retained_intron MGP_LPJ_T0044269.1 MGP_LPJ_G0022726.1 mouse_genomes_project 16 38206760 39267296 + MGP_LPJ_P0044269 Lsamp protein_coding protein_coding MGP_LPJ_T0044270.1 MGP_LPJ_G0022726.1 mouse_genomes_project 16 38206770 40537038 + MGP_LPJ_P0044270 Lsamp protein_coding protein_coding MGP_LPJ_T0044271.1 MGP_LPJ_G0022726.1 mouse_genomes_project 16 38206785 39507627 + MGP_LPJ_P0044271 Lsamp protein_coding protein_coding MGP_LPJ_T0044272.1 MGP_LPJ_G0022726.1 mouse_genomes_project 16 38206785 39717410 + MGP_LPJ_P0044272 Lsamp protein_coding protein_coding MGP_LPJ_T0044273.1 MGP_LPJ_G0022726.1 mouse_genomes_project 16 38206994 38923784 + Lsamp protein_coding processed_transcript MGP_LPJ_T0044274.1 MGP_LPJ_G0022726.1 mouse_genomes_project 16 39858843 40505219 + MGP_LPJ_P0044274 Lsamp protein_coding protein_coding MGP_LPJ_T0044275.1 MGP_LPJ_G0022726.1 mouse_genomes_project 16 39859022 40542482 + MGP_LPJ_P0044275 Lsamp protein_coding protein_coding MGP_LPJ_T0044276.1 MGP_LPJ_G0022726.1 mouse_genomes_project 16 39859404 39865322 + MGP_LPJ_P0044276 Lsamp protein_coding protein_coding MGP_LPJ_T0044277.1 MGP_LPJ_G0022726.1 mouse_genomes_project 16 40502989 40535201 + MGP_LPJ_P0044277 Lsamp protein_coding protein_coding MGP_LPJ_T0044278.1 MGP_LPJ_G0022726.1 mouse_genomes_project 16 40503030 40535026 + MGP_LPJ_P0044278 Lsamp protein_coding protein_coding MGP_LPJ_T0044059.1 MGP_LPJ_G0022666.1 mouse_genomes_project 16 32735034 32873939 + Mylk protein_coding retained_intron MGP_LPJ_T0044060.1 MGP_LPJ_G0022666.1 mouse_genomes_project 16 32779492 33000805 + MGP_LPJ_P0044060 Mylk protein_coding protein_coding MGP_LPJ_T0045189.1 MGP_LPJ_G0022988.1 mouse_genomes_project 16 97241997 97334591 + MGP_LPJ_P0045189 B3galt5 protein_coding protein_coding MGP_LPJ_T0045190.1 MGP_LPJ_G0022988.1 mouse_genomes_project 16 97283128 97328509 + B3galt5 protein_coding processed_transcript MGP_LPJ_T0045191.1 MGP_LPJ_G0022988.1 mouse_genomes_project 16 97283265 97328510 + B3galt5 protein_coding processed_transcript MGP_LPJ_T0045192.1 MGP_LPJ_G0022988.1 mouse_genomes_project 16 97290452 97334589 + MGP_LPJ_P0045192 B3galt5 protein_coding protein_coding MGP_LPJ_T0044659.1 MGP_LPJ_G0022838.1 mouse_genomes_project 16 61984656 62038839 - MGP_LPJ_P0044659 Nsun3 protein_coding nonsense_mediated_decay MGP_LPJ_T0044660.1 MGP_LPJ_G0022838.1 mouse_genomes_project 16 61984656 62038839 - MGP_LPJ_P0044660 Nsun3 protein_coding protein_coding MGP_LPJ_T0044661.1 MGP_LPJ_G0022838.1 mouse_genomes_project 16 61987372 62019185 - Nsun3 protein_coding processed_transcript MGP_LPJ_T0044662.1 MGP_LPJ_G0022838.1 mouse_genomes_project 16 62022753 62038828 - MGP_LPJ_P0044662 Nsun3 protein_coding protein_coding MGP_LPJ_T0044663.1 MGP_LPJ_G0022838.1 mouse_genomes_project 16 62028227 62038880 - Nsun3 protein_coding processed_transcript MGP_LPJ_T0044664.1 MGP_LPJ_G0022838.1 mouse_genomes_project 16 62031312 62038775 - Nsun3 protein_coding processed_transcript MGP_LPJ_T0098371.1 MGP_LPJ_G0036652.1 mouse_genomes_project 16 31050673 31051072 - Gm23916 ribozyme ribozyme MGP_LPJ_T0044816.1 MGP_LPJ_G0022892.1 mouse_genomes_project 16 89164085 89164731 - MGP_LPJ_P0044816 Krtap27-1 protein_coding protein_coding MGP_LPJ_T0042877.1 MGP_LPJ_G0022390.1 mouse_genomes_project 16 1756736 1768561 + MGP_LPJ_P0042877 Alg1 protein_coding protein_coding MGP_LPJ_T0042878.1 MGP_LPJ_G0022390.1 mouse_genomes_project 16 1756753 1762845 + Alg1 protein_coding retained_intron MGP_LPJ_T0042879.1 MGP_LPJ_G0022390.1 mouse_genomes_project 16 1756753 1768570 + MGP_LPJ_P0042879 Alg1 protein_coding protein_coding MGP_LPJ_T0042880.1 MGP_LPJ_G0022390.1 mouse_genomes_project 16 1758285 1763625 + Alg1 protein_coding processed_transcript MGP_LPJ_T0042881.1 MGP_LPJ_G0022390.1 mouse_genomes_project 16 1763180 1766831 + Alg1 protein_coding retained_intron MGP_LPJ_T0044109.1 MGP_LPJ_G0022683.1 mouse_genomes_project 16 34310964 34314836 + MGP_LPJ_P0044109 Gm5483 protein_coding protein_coding MGP_LPJ_T0044846.1 MGP_LPJ_G0022918.1 mouse_genomes_project 16 89703157 89703554 + MGP_LPJ_P0044846 Gm9789 protein_coding protein_coding MGP_LPJ_T0099153.1 MGP_LPJ_G0037416.1 mouse_genomes_project 16 4952371 4952475 + Gm26159 snRNA snRNA MGP_LPJ_T0043231.1 MGP_LPJ_G0022474.1 mouse_genomes_project 16 14134078 14163983 + MGP_LPJ_P0043231 Hic2 protein_coding protein_coding MGP_LPJ_T0043232.1 MGP_LPJ_G0022474.1 mouse_genomes_project 16 14134170 14162148 + MGP_LPJ_P0043232 Hic2 protein_coding protein_coding MGP_LPJ_T0044746.1 MGP_LPJ_G0022870.1 mouse_genomes_project 16 81258364 81673865 + MGP_LPJ_P0044746 Ncam2 protein_coding protein_coding MGP_LPJ_T0044747.1 MGP_LPJ_G0022870.1 mouse_genomes_project 16 81258364 81714097 + MGP_LPJ_P0044747 Ncam2 protein_coding protein_coding MGP_LPJ_T0003670.1 MGP_LPJ_G0003325.1 mouse_genomes_project 16 16072710 16142777 + antisense antisense MGP_LPJ_T0003667.1 MGP_LPJ_G0003322.1 mouse_genomes_project 16 14034780 14035589 + Gm15646 antisense antisense MGP_LPJ_T0044685.1 MGP_LPJ_G0022850.1 mouse_genomes_project 16 65151037 65203263 + MGP_LPJ_P0044685 Vgll3 protein_coding protein_coding MGP_LPJ_T0044686.1 MGP_LPJ_G0022850.1 mouse_genomes_project 16 65151037 65200919 + MGP_LPJ_P0044686 Vgll3 protein_coding unknown_likely_coding MGP_LPJ_T0044527.1 MGP_LPJ_G0022788.1 mouse_genomes_project 16 54948408 54953600 - MGP_LPJ_P0044527 Trmt10c protein_coding protein_coding MGP_LPJ_T0042811.1 MGP_LPJ_G0022371.1 mouse_genomes_project 16 1144941 1191764 + Dnaja3 protein_coding processed_transcript MGP_LPJ_T0042815.1 MGP_LPJ_G0022371.1 mouse_genomes_project 16 1188835 1215245 + MGP_LPJ_P0042815 Dnaja3 protein_coding protein_coding MGP_LPJ_T0042816.1 MGP_LPJ_G0022371.1 mouse_genomes_project 16 1188861 1215245 + MGP_LPJ_P0042816 Dnaja3 protein_coding protein_coding MGP_LPJ_T0042817.1 MGP_LPJ_G0022371.1 mouse_genomes_project 16 1188879 1199483 + Dnaja3 protein_coding retained_intron MGP_LPJ_T0100430.1 MGP_LPJ_G0038693.1 mouse_genomes_project 16 36354574 36354707 + Gm25617 snoRNA snoRNA MGP_LPJ_T0010162.1 MGP_LPJ_G0008280.1 mouse_genomes_project 16 54977030 54977134 + Gm24047 miRNA miRNA MGP_LPJ_T0043922.1 MGP_LPJ_G0022637.1 mouse_genomes_project 16 30111092 30123282 + MGP_LPJ_P0043922 Rnf168 protein_coding protein_coding MGP_LPJ_T0043923.1 MGP_LPJ_G0022637.1 mouse_genomes_project 16 30111094 30131648 + MGP_LPJ_P0043923 Rnf168 protein_coding protein_coding MGP_LPJ_T0043924.1 MGP_LPJ_G0022637.1 mouse_genomes_project 16 30111094 30132176 + MGP_LPJ_P0043924 Rnf168 protein_coding protein_coding MGP_LPJ_T0044713.1 MGP_LPJ_G0022857.1 mouse_genomes_project 16 75345292 75392846 - MGP_LPJ_P0044713 Lipi protein_coding protein_coding MGP_LPJ_T0044714.1 MGP_LPJ_G0022857.1 mouse_genomes_project 16 75345322 75375766 - Lipi protein_coding processed_transcript MGP_LPJ_T0043903.1 MGP_LPJ_G0022631.1 mouse_genomes_project 16 29913239 29924322 + MGP_LPJ_P0043903 Cep19 protein_coding protein_coding MGP_LPJ_T0043904.1 MGP_LPJ_G0022631.1 mouse_genomes_project 16 29913391 29924304 + MGP_LPJ_P0043904 Cep19 protein_coding protein_coding MGP_LPJ_T0043905.1 MGP_LPJ_G0022631.1 mouse_genomes_project 16 29920335 29924308 + MGP_LPJ_P0043905 Cep19 protein_coding protein_coding MGP_LPJ_T0044773.1 MGP_LPJ_G0022877.1 mouse_genomes_project 16 86140256 86149528 - MGP_LPJ_P0044773 Adamts1 protein_coding protein_coding MGP_LPJ_T0044774.1 MGP_LPJ_G0022877.1 mouse_genomes_project 16 86141899 86147894 - MGP_LPJ_P0044774 Adamts1 protein_coding protein_coding MGP_LPJ_T0044775.1 MGP_LPJ_G0022877.1 mouse_genomes_project 16 86144654 86146062 - Adamts1 protein_coding processed_transcript MGP_LPJ_T0010179.1 MGP_LPJ_G0008297.1 mouse_genomes_project 16 94199962 94200059 + Mir802 miRNA miRNA MGP_LPJ_T0010154.1 MGP_LPJ_G0008272.1 mouse_genomes_project 16 40672385 40672493 - Mir6540 miRNA miRNA MGP_LPJ_T0042973.1 MGP_LPJ_G0022416.1 mouse_genomes_project 16 7576002 7576563 - MGP_LPJ_P0042973 Prm1 protein_coding protein_coding MGP_LPJ_T0098193.1 MGP_LPJ_G0036474.1 mouse_genomes_project 16 98585245 98585353 - Gm24777 rRNA rRNA MGP_LPJ_T0043256.1 MGP_LPJ_G0022477.1 mouse_genomes_project 16 14233729 14245938 + MGP_LPJ_P0043256 Serpind1 protein_coding protein_coding MGP_LPJ_T0043257.1 MGP_LPJ_G0022477.1 mouse_genomes_project 16 14233741 14245937 + MGP_LPJ_P0043257 Serpind1 protein_coding protein_coding MGP_LPJ_T0098191.1 MGP_LPJ_G0036472.1 mouse_genomes_project 16 60559270 60559388 - n-R5s37 rRNA rRNA MGP_LPJ_T0044651.1 MGP_LPJ_G0022836.1 mouse_genomes_project 16 58705548 58734120 - MGP_LPJ_P0044651 Arl6 protein_coding protein_coding MGP_LPJ_T0044652.1 MGP_LPJ_G0022836.1 mouse_genomes_project 16 58705927 58734344 - MGP_LPJ_P0044652 Arl6 protein_coding protein_coding MGP_LPJ_T0044653.1 MGP_LPJ_G0022836.1 mouse_genomes_project 16 58706204 58727456 - MGP_LPJ_P0044653 Arl6 protein_coding protein_coding MGP_LPJ_T0044654.1 MGP_LPJ_G0022836.1 mouse_genomes_project 16 58714184 58734082 - MGP_LPJ_P0044654 Arl6 protein_coding protein_coding MGP_LPJ_T0044597.1 MGP_LPJ_G0022806.1 mouse_genomes_project 16 57617495 57621068 - MGP_LPJ_P0044597 E330017A01Rik protein_coding protein_coding MGP_LPJ_T0017468.1 MGP_LPJ_G0015245.1 mouse_genomes_project 16 92339863 92352206 + Gm15964 processed_transcript processed_transcript MGP_LPJ_T0100435.1 MGP_LPJ_G0038698.1 mouse_genomes_project 16 44794748 44794880 + Gm26297 snoRNA snoRNA MGP_LPJ_T0043127.1 MGP_LPJ_G0022455.1 mouse_genomes_project 16 12772657 13052590 - MGP_LPJ_P0043127 Spidr protein_coding protein_coding MGP_LPJ_T0100420.1 MGP_LPJ_G0038683.1 mouse_genomes_project 16 20463466 20463644 + Snora81 snoRNA snoRNA MGP_LPJ_T0043845.1 MGP_LPJ_G0022619.1 mouse_genomes_project 16 28842650 28959593 - MGP_LPJ_P0043845 Acap2 protein_coding protein_coding MGP_LPJ_T0043846.1 MGP_LPJ_G0022619.1 mouse_genomes_project 16 28847002 28959346 - MGP_LPJ_P0043846 Acap2 protein_coding unknown_likely_coding MGP_LPJ_T0044102.1 MGP_LPJ_G0022679.1 mouse_genomes_project 16 34137737 34167644 - MGP_LPJ_P0044102 Fam162a protein_coding protein_coding MGP_LPJ_T0010133.1 MGP_LPJ_G0008251.1 mouse_genomes_project 16 15152755 15152837 - Mir6366 miRNA miRNA MGP_LPJ_T0043818.1 MGP_LPJ_G0022614.1 mouse_genomes_project 16 28017256 28098426 - MGP_LPJ_P0043818 Atp13a3 protein_coding protein_coding MGP_LPJ_T0043819.1 MGP_LPJ_G0022614.1 mouse_genomes_project 16 28017256 28098426 - MGP_LPJ_P0043819 Atp13a3 protein_coding protein_coding MGP_LPJ_T0043820.1 MGP_LPJ_G0022614.1 mouse_genomes_project 16 28060485 28063560 - Atp13a3 protein_coding retained_intron MGP_LPJ_T0043821.1 MGP_LPJ_G0022614.1 mouse_genomes_project 16 28067964 28098381 - Atp13a3 protein_coding retained_intron MGP_LPJ_T0043822.1 MGP_LPJ_G0022614.1 mouse_genomes_project 16 28095788 28098733 - Atp13a3 protein_coding retained_intron MGP_LPJ_T0044850.1 MGP_LPJ_G0022922.1 mouse_genomes_project 16 89941996 89943432 - MGP_LPJ_P0044850 Krtap21-1 protein_coding protein_coding MGP_LPJ_T0044582.1 MGP_LPJ_G0022804.1 mouse_genomes_project 16 57416021 57482562 - MGP_LPJ_P0044582 St3gal6 protein_coding protein_coding MGP_LPJ_T0044583.1 MGP_LPJ_G0022804.1 mouse_genomes_project 16 57417649 57483379 - MGP_LPJ_P0044583 St3gal6 protein_coding protein_coding MGP_LPJ_T0044584.1 MGP_LPJ_G0022804.1 mouse_genomes_project 16 57418108 57483321 - MGP_LPJ_P0044584 St3gal6 protein_coding protein_coding MGP_LPJ_T0044585.1 MGP_LPJ_G0022804.1 mouse_genomes_project 16 57423753 57482689 - St3gal6 protein_coding processed_transcript MGP_LPJ_T0044586.1 MGP_LPJ_G0022804.1 mouse_genomes_project 16 57440087 57443092 - St3gal6 protein_coding retained_intron MGP_LPJ_T0044587.1 MGP_LPJ_G0022804.1 mouse_genomes_project 16 57442585 57482580 - St3gal6 protein_coding processed_transcript MGP_LPJ_T0044588.1 MGP_LPJ_G0022804.1 mouse_genomes_project 16 57442598 57483305 - MGP_LPJ_P0044588 St3gal6 protein_coding protein_coding MGP_LPJ_T0044589.1 MGP_LPJ_G0022804.1 mouse_genomes_project 16 57447357 57483305 - MGP_LPJ_P0044589 St3gal6 protein_coding protein_coding MGP_LPJ_T0044590.1 MGP_LPJ_G0022804.1 mouse_genomes_project 16 57447409 57452843 - St3gal6 protein_coding processed_transcript MGP_LPJ_T0044591.1 MGP_LPJ_G0022804.1 mouse_genomes_project 16 57447411 57482480 - St3gal6 protein_coding processed_transcript MGP_LPJ_T0044592.1 MGP_LPJ_G0022804.1 mouse_genomes_project 16 57447420 57483270 - St3gal6 protein_coding processed_transcript MGP_LPJ_T0044593.1 MGP_LPJ_G0022804.1 mouse_genomes_project 16 57447420 57482860 - St3gal6 protein_coding processed_transcript MGP_LPJ_T0044594.1 MGP_LPJ_G0022804.1 mouse_genomes_project 16 57456362 57482894 - St3gal6 protein_coding processed_transcript MGP_LPJ_T0044595.1 MGP_LPJ_G0022804.1 mouse_genomes_project 16 57456362 57465735 - St3gal6 protein_coding retained_intron MGP_LPJ_T0003693.1 MGP_LPJ_G0003343.1 mouse_genomes_project 16 44262473 44263094 + Gm15591 antisense antisense MGP_LPJ_T0013134.1 MGP_LPJ_G0011225.1 mouse_genomes_project 16 15964910 15965318 - processed_pseudogene processed_pseudogene MGP_LPJ_T0100431.1 MGP_LPJ_G0038694.1 mouse_genomes_project 16 36354574 36354706 + Gm25617 snoRNA snoRNA MGP_LPJ_T0013161.1 MGP_LPJ_G0011252.1 mouse_genomes_project 16 36965223 36966804 - processed_pseudogene processed_pseudogene MGP_LPJ_T0043883.1 MGP_LPJ_G0022627.1 mouse_genomes_project 16 29742326 29752764 + MGP_LPJ_P0043883 Ncbp2 protein_coding protein_coding MGP_LPJ_T0043884.1 MGP_LPJ_G0022627.1 mouse_genomes_project 16 29742414 29751426 + Ncbp2 protein_coding retained_intron MGP_LPJ_T0043885.1 MGP_LPJ_G0022627.1 mouse_genomes_project 16 29742419 29756083 + Ncbp2 protein_coding processed_transcript MGP_LPJ_T0043886.1 MGP_LPJ_G0022627.1 mouse_genomes_project 16 29742426 29751454 + MGP_LPJ_P0043886 Ncbp2 protein_coding protein_coding MGP_LPJ_T0017434.1 MGP_LPJ_G0015233.1 mouse_genomes_project 16 24243237 24285834 - Gm20319 processed_transcript processed_transcript MGP_LPJ_T0017435.1 MGP_LPJ_G0015233.1 mouse_genomes_project 16 24243535 24285845 - Gm20319 processed_transcript processed_transcript MGP_LPJ_T0017436.1 MGP_LPJ_G0015233.1 mouse_genomes_project 16 24260446 24285845 - Gm20319 processed_transcript processed_transcript MGP_LPJ_T0013149.1 MGP_LPJ_G0011240.1 mouse_genomes_project 16 24888532 24889366 - processed_pseudogene processed_pseudogene MGP_LPJ_T0043009.1 MGP_LPJ_G0022423.1 mouse_genomes_project 16 8004823 8016349 - MGP_LPJ_P0043009 Rsl1d1 protein_coding protein_coding MGP_LPJ_T0043010.1 MGP_LPJ_G0022423.1 mouse_genomes_project 16 8005358 8006849 - Rsl1d1 protein_coding retained_intron MGP_LPJ_T0043011.1 MGP_LPJ_G0022423.1 mouse_genomes_project 16 8008286 8016282 - Rsl1d1 protein_coding retained_intron MGP_LPJ_T0100459.1 MGP_LPJ_G0038722.1 mouse_genomes_project 16 91235399 91235521 + Gm23406 snoRNA snoRNA MGP_LPJ_T0042911.1 MGP_LPJ_G0022398.1 mouse_genomes_project 16 5300913 5314672 - MGP_LPJ_P0042911 Carhsp1 protein_coding protein_coding MGP_LPJ_T0098003.1 MGP_LPJ_G0036284.1 mouse_genomes_project 16 89960707 89961879 - pseudogene pseudogene MGP_LPJ_T0098186.1 MGP_LPJ_G0036467.1 mouse_genomes_project 16 27833926 27834029 - n-R5s32 rRNA rRNA MGP_LPJ_T0042872.1 MGP_LPJ_G0022388.1 mouse_genomes_project 16 1723379 1731874 - MGP_LPJ_P0042872 Nagpa protein_coding protein_coding MGP_LPJ_T0042873.1 MGP_LPJ_G0022388.1 mouse_genomes_project 16 1723379 1731864 - MGP_LPJ_P0042873 Nagpa protein_coding protein_coding MGP_LPJ_T0042874.1 MGP_LPJ_G0022388.1 mouse_genomes_project 16 1723477 1725627 - Nagpa protein_coding processed_transcript MGP_LPJ_T0042875.1 MGP_LPJ_G0022388.1 mouse_genomes_project 16 1727674 1731339 - Nagpa protein_coding retained_intron MGP_LPJ_T0043850.1 MGP_LPJ_G0022621.1 mouse_genomes_project 16 29066378 29084905 - MGP_LPJ_P0043850 Apod protein_coding protein_coding MGP_LPJ_T0043851.1 MGP_LPJ_G0022621.1 mouse_genomes_project 16 29067257 29084901 - MGP_LPJ_P0043851 Apod protein_coding protein_coding MGP_LPJ_T0043852.1 MGP_LPJ_G0022621.1 mouse_genomes_project 16 29067291 29084691 - Apod protein_coding retained_intron MGP_LPJ_T0043853.1 MGP_LPJ_G0022621.1 mouse_genomes_project 16 29067555 29073542 - Apod protein_coding retained_intron MGP_LPJ_T0043854.1 MGP_LPJ_G0022621.1 mouse_genomes_project 16 29067648 29073775 - Apod protein_coding retained_intron MGP_LPJ_T0043855.1 MGP_LPJ_G0022621.1 mouse_genomes_project 16 29073601 29081445 - Apod protein_coding retained_intron MGP_LPJ_T0043921.1 MGP_LPJ_G0022636.1 mouse_genomes_project 16 30104201 30108411 + MGP_LPJ_P0043921 Smco1 protein_coding protein_coding MGP_LPJ_T0042981.1 MGP_LPJ_G0022420.1 mouse_genomes_project 16 7866643 7876253 + MGP_LPJ_P0042981 Snn protein_coding protein_coding MGP_LPJ_T0042770.1 MGP_LPJ_G0022362.1 mouse_genomes_project 16 505641 544521 - MGP_LPJ_P0042770 Trap1 protein_coding protein_coding MGP_LPJ_T0042771.1 MGP_LPJ_G0022362.1 mouse_genomes_project 16 505810 510369 - Trap1 protein_coding processed_transcript MGP_LPJ_T0042772.1 MGP_LPJ_G0022362.1 mouse_genomes_project 16 524275 544469 - MGP_LPJ_P0042772 Trap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0042773.1 MGP_LPJ_G0022362.1 mouse_genomes_project 16 533772 544521 - Trap1 protein_coding retained_intron MGP_LPJ_T0003675.1 MGP_LPJ_G0003329.1 mouse_genomes_project 16 29925117 29930022 + Gm15729 antisense antisense MGP_LPJ_T0099161.1 MGP_LPJ_G0037424.1 mouse_genomes_project 16 14394656 14394723 - Gm22770 snRNA snRNA MGP_LPJ_T0000016.1 MGP_LPJ_G0000011.1 mouse_genomes_project 16 16082517 16082971 - MGP_LPJ_P0000016 Iglc1 IG_C_gene IG_C_gene MGP_LPJ_T0013151.1 MGP_LPJ_G0011242.1 mouse_genomes_project 16 29718222 29719102 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099160.1 MGP_LPJ_G0037423.1 mouse_genomes_project 16 14244268 14244375 - Gm24927 snRNA snRNA MGP_LPJ_T0013170.1 MGP_LPJ_G0011261.1 mouse_genomes_project 16 45666396 45669231 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100450.1 MGP_LPJ_G0038713.1 mouse_genomes_project 16 75952517 75952648 - Gm22268 snoRNA snoRNA MGP_LPJ_T0044803.1 MGP_LPJ_G0022884.1 mouse_genomes_project 16 87959620 88008047 + MGP_LPJ_P0044803 Map3k7cl protein_coding protein_coding MGP_LPJ_T0003695.1 MGP_LPJ_G0003345.1 mouse_genomes_project 16 44504450 44530188 + Gm15638 antisense antisense MGP_LPJ_T0003696.1 MGP_LPJ_G0003345.1 mouse_genomes_project 16 44504457 44516133 + Gm15638 antisense antisense MGP_LPJ_T0003697.1 MGP_LPJ_G0003345.1 mouse_genomes_project 16 44504462 44507519 + Gm15638 antisense antisense MGP_LPJ_T0043212.1 MGP_LPJ_G0022468.1 mouse_genomes_project 16 14006099 14016223 - MGP_LPJ_P0043212 2610318N02Rik protein_coding protein_coding MGP_LPJ_T0044916.1 MGP_LPJ_G0022938.1 mouse_genomes_project 16 91731052 91747986 - MGP_LPJ_P0044916 4932438H23Rik protein_coding protein_coding MGP_LPJ_T0044917.1 MGP_LPJ_G0022938.1 mouse_genomes_project 16 91731052 91747986 - MGP_LPJ_P0044917 4932438H23Rik protein_coding protein_coding MGP_LPJ_T0044918.1 MGP_LPJ_G0022938.1 mouse_genomes_project 16 91732956 91794861 - MGP_LPJ_P0044918 4932438H23Rik protein_coding protein_coding MGP_LPJ_T0043916.1 MGP_LPJ_G0022634.1 mouse_genomes_project 16 30062140 30076754 - MGP_LPJ_P0043916 Fbxo45 protein_coding protein_coding MGP_LPJ_T0044077.1 MGP_LPJ_G0022672.1 mouse_genomes_project 16 33760550 33841184 - MGP_LPJ_P0044077 Dirc2 protein_coding protein_coding MGP_LPJ_T0044078.1 MGP_LPJ_G0022672.1 mouse_genomes_project 16 33764036 33841158 - MGP_LPJ_P0044078 Dirc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0044360.1 MGP_LPJ_G0022742.1 mouse_genomes_project 16 43218236 43231974 + MGP_LPJ_P0044360 Nepro protein_coding protein_coding MGP_LPJ_T0044361.1 MGP_LPJ_G0022742.1 mouse_genomes_project 16 43218292 43225344 + MGP_LPJ_P0044361 Nepro protein_coding nonsense_mediated_decay MGP_LPJ_T0044362.1 MGP_LPJ_G0022742.1 mouse_genomes_project 16 43218292 43231263 + MGP_LPJ_P0044362 Nepro protein_coding nonsense_mediated_decay MGP_LPJ_T0044363.1 MGP_LPJ_G0022742.1 mouse_genomes_project 16 43220102 43228819 + Nepro protein_coding retained_intron MGP_LPJ_T0044364.1 MGP_LPJ_G0022742.1 mouse_genomes_project 16 43221054 43229416 + MGP_LPJ_P0044364 Nepro protein_coding nonsense_mediated_decay MGP_LPJ_T0017445.1 MGP_LPJ_G0015239.1 mouse_genomes_project 16 66046778 66054941 + 1700010K23Rik processed_transcript processed_transcript MGP_LPJ_T0043963.1 MGP_LPJ_G0022647.1 mouse_genomes_project 16 30656958 30680057 - MGP_LPJ_P0043963 Muc20 protein_coding protein_coding MGP_LPJ_T0043966.1 MGP_LPJ_G0022647.1 mouse_genomes_project 16 30667339 30680057 - MGP_LPJ_P0043966 Muc20 protein_coding protein_coding MGP_LPJ_T0044080.1 MGP_LPJ_G0022674.1 mouse_genomes_project 16 33911255 33952066 - MGP_LPJ_P0044080 Parp14 protein_coding protein_coding MGP_LPJ_T0044081.1 MGP_LPJ_G0022674.1 mouse_genomes_project 16 33936642 33951911 - Parp14 protein_coding retained_intron MGP_LPJ_T0044082.1 MGP_LPJ_G0022674.1 mouse_genomes_project 16 33946454 33951911 - Parp14 protein_coding retained_intron MGP_LPJ_T0099171.1 MGP_LPJ_G0037434.1 mouse_genomes_project 16 33257916 33258044 - Gm25179 snRNA snRNA MGP_LPJ_T0044753.1 MGP_LPJ_G0022873.1 mouse_genomes_project 16 85095458 85101832 - MGP_LPJ_P0044753 Atp5j protein_coding protein_coding MGP_LPJ_T0044754.1 MGP_LPJ_G0022873.1 mouse_genomes_project 16 85095463 85096406 - Atp5j protein_coding retained_intron MGP_LPJ_T0044755.1 MGP_LPJ_G0022873.1 mouse_genomes_project 16 85095463 85103096 - MGP_LPJ_P0044755 Atp5j protein_coding protein_coding MGP_LPJ_T0044756.1 MGP_LPJ_G0022873.1 mouse_genomes_project 16 85095463 85103218 - MGP_LPJ_P0044756 Atp5j protein_coding protein_coding MGP_LPJ_T0044757.1 MGP_LPJ_G0022873.1 mouse_genomes_project 16 85095466 85099200 - Atp5j protein_coding retained_intron MGP_LPJ_T0044758.1 MGP_LPJ_G0022873.1 mouse_genomes_project 16 85096031 85103195 - MGP_LPJ_P0044758 Atp5j protein_coding protein_coding MGP_LPJ_T0044759.1 MGP_LPJ_G0022873.1 mouse_genomes_project 16 85097140 85101469 - Atp5j protein_coding processed_transcript MGP_LPJ_T0044760.1 MGP_LPJ_G0022873.1 mouse_genomes_project 16 85098663 85102891 - Atp5j protein_coding retained_intron MGP_LPJ_T0044761.1 MGP_LPJ_G0022873.1 mouse_genomes_project 16 85098921 85102748 - Atp5j protein_coding processed_transcript MGP_LPJ_T0044762.1 MGP_LPJ_G0022873.1 mouse_genomes_project 16 85098961 85102598 - Atp5j protein_coding processed_transcript MGP_LPJ_T0044763.1 MGP_LPJ_G0022873.1 mouse_genomes_project 16 85101115 85102425 - Atp5j protein_coding retained_intron MGP_LPJ_T0044764.1 MGP_LPJ_G0022873.1 mouse_genomes_project 16 85101868 85103122 - Atp5j protein_coding retained_intron MGP_LPJ_T0042870.1 MGP_LPJ_G0022386.1 mouse_genomes_project 16 1611349 1657169 - MGP_LPJ_P0042870 Ppl protein_coding protein_coding MGP_LPJ_T0043652.1 MGP_LPJ_G0022562.1 mouse_genomes_project 16 18829840 18878802 - MGP_LPJ_P0043652 2510009E07Rik protein_coding protein_coding MGP_LPJ_T0099157.1 MGP_LPJ_G0037420.1 mouse_genomes_project 16 7975538 7975701 - Gm24145 snRNA snRNA MGP_LPJ_T0043058.1 MGP_LPJ_G0022437.1 mouse_genomes_project 16 10727608 10740302 + Ntan1 protein_coding processed_transcript MGP_LPJ_T0043059.1 MGP_LPJ_G0022437.1 mouse_genomes_project 16 10727630 10740419 + Ntan1 protein_coding processed_transcript MGP_LPJ_T0043060.1 MGP_LPJ_G0022437.1 mouse_genomes_project 16 10727637 10743803 + Ntan1 protein_coding processed_transcript MGP_LPJ_T0043061.1 MGP_LPJ_G0022437.1 mouse_genomes_project 16 10727675 10735414 + Ntan1 protein_coding retained_intron MGP_LPJ_T0043062.1 MGP_LPJ_G0022437.1 mouse_genomes_project 16 10727687 10743669 + MGP_LPJ_P0043062 Ntan1 protein_coding protein_coding MGP_LPJ_T0043063.1 MGP_LPJ_G0022437.1 mouse_genomes_project 16 10739474 10740562 + Ntan1 protein_coding retained_intron MGP_LPJ_T0043066.1 MGP_LPJ_G0022437.1 mouse_genomes_project 16 10742436 10743521 + Ntan1 protein_coding retained_intron MGP_LPJ_T0043341.1 MGP_LPJ_G0022490.1 mouse_genomes_project 16 14748138 14759070 + MGP_LPJ_P0043341 Scarf2 protein_coding protein_coding MGP_LPJ_T0042818.1 MGP_LPJ_G0022372.1 mouse_genomes_project 16 1217586 1226593 - MGP_LPJ_P0042818 Nmral1 protein_coding protein_coding MGP_LPJ_T0042819.1 MGP_LPJ_G0022372.1 mouse_genomes_project 16 1218844 1226840 - MGP_LPJ_P0042819 Nmral1 protein_coding protein_coding MGP_LPJ_T0042820.1 MGP_LPJ_G0022372.1 mouse_genomes_project 16 1218844 1226640 - MGP_LPJ_P0042820 Nmral1 protein_coding protein_coding MGP_LPJ_T0042821.1 MGP_LPJ_G0022372.1 mouse_genomes_project 16 1219822 1226596 - MGP_LPJ_P0042821 Nmral1 protein_coding protein_coding MGP_LPJ_T0042822.1 MGP_LPJ_G0022372.1 mouse_genomes_project 16 1222036 1226572 - Nmral1 protein_coding retained_intron MGP_LPJ_T0042823.1 MGP_LPJ_G0022372.1 mouse_genomes_project 16 1223352 1226588 - Nmral1 protein_coding retained_intron MGP_LPJ_T0044919.1 MGP_LPJ_G0022939.1 mouse_genomes_project 16 91874697 91877903 - MGP_LPJ_P0044919 Gm9881 protein_coding protein_coding MGP_LPJ_T0044419.1 MGP_LPJ_G0022755.1 mouse_genomes_project 16 44128830 44139671 + MGP_LPJ_P0044419 Gcsam protein_coding protein_coding MGP_LPJ_T0044420.1 MGP_LPJ_G0022755.1 mouse_genomes_project 16 44128873 44141295 + MGP_LPJ_P0044420 Gcsam protein_coding protein_coding MGP_LPJ_T0000993.1 MGP_LPJ_G0000920.1 mouse_genomes_project 16 77241538 77242190 + TEC TEC MGP_LPJ_T0043510.1 MGP_LPJ_G0022540.1 mouse_genomes_project 16 17284929 17293022 - MGP_LPJ_P0043510 Map6d1 protein_coding protein_coding MGP_LPJ_T0044063.1 MGP_LPJ_G0022669.1 mouse_genomes_project 16 33342340 33396682 - MGP_LPJ_P0044063 Sec22a protein_coding protein_coding MGP_LPJ_T0044064.1 MGP_LPJ_G0022669.1 mouse_genomes_project 16 33345279 33380503 - Sec22a protein_coding processed_transcript MGP_LPJ_T0044065.1 MGP_LPJ_G0022669.1 mouse_genomes_project 16 33381673 33396579 - Sec22a protein_coding retained_intron MGP_LPJ_T0044066.1 MGP_LPJ_G0022669.1 mouse_genomes_project 16 33393436 33396616 - Sec22a protein_coding retained_intron MGP_LPJ_T0044067.1 MGP_LPJ_G0022669.1 mouse_genomes_project 16 33393808 33396611 - Sec22a protein_coding processed_transcript MGP_LPJ_T0042952.1 MGP_LPJ_G0022409.1 mouse_genomes_project 16 7242860 7291907 + MGP_LPJ_P0042952 Ciita protein_coding unknown_likely_coding MGP_LPJ_T0042953.1 MGP_LPJ_G0022409.1 mouse_genomes_project 16 7250945 7294229 + MGP_LPJ_P0042953 Ciita protein_coding protein_coding MGP_LPJ_T0101911.1 MGP_LPJ_G0039948.1 mouse_genomes_project 16 58041630 58043524 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0001004.1 MGP_LPJ_G0000930.1 mouse_genomes_project 16 77516105 77519129 + TEC TEC MGP_LPJ_T0042786.1 MGP_LPJ_G0022365.1 mouse_genomes_project 16 966304 1013307 - MGP_LPJ_P0042786 Srl protein_coding protein_coding MGP_LPJ_T0042787.1 MGP_LPJ_G0022365.1 mouse_genomes_project 16 966316 1013307 - MGP_LPJ_P0042787 Srl protein_coding protein_coding MGP_LPJ_T0042788.1 MGP_LPJ_G0022365.1 mouse_genomes_project 16 977428 1031526 - Srl protein_coding processed_transcript MGP_LPJ_T0042789.1 MGP_LPJ_G0022365.1 mouse_genomes_project 16 983437 1013295 - Srl protein_coding retained_intron MGP_LPJ_T0042957.1 MGP_LPJ_G0022411.1 mouse_genomes_project 16 7311994 7521472 + MGP_LPJ_P0042957 Clec16a protein_coding protein_coding MGP_LPJ_T0042958.1 MGP_LPJ_G0022411.1 mouse_genomes_project 16 7311994 7521472 + MGP_LPJ_P0042958 Clec16a protein_coding protein_coding MGP_LPJ_T0042959.1 MGP_LPJ_G0022411.1 mouse_genomes_project 16 7312019 7521472 + MGP_LPJ_P0042959 Clec16a protein_coding protein_coding MGP_LPJ_T0042960.1 MGP_LPJ_G0022411.1 mouse_genomes_project 16 7312032 7331273 + Clec16a protein_coding processed_transcript MGP_LPJ_T0042961.1 MGP_LPJ_G0022411.1 mouse_genomes_project 16 7312053 7495015 + MGP_LPJ_P0042961 Clec16a protein_coding protein_coding MGP_LPJ_T0042962.1 MGP_LPJ_G0022411.1 mouse_genomes_project 16 7312064 7326394 + MGP_LPJ_P0042962 Clec16a protein_coding protein_coding MGP_LPJ_T0042963.1 MGP_LPJ_G0022411.1 mouse_genomes_project 16 7312064 7467923 + MGP_LPJ_P0042963 Clec16a protein_coding protein_coding MGP_LPJ_T0042964.1 MGP_LPJ_G0022411.1 mouse_genomes_project 16 7312064 7516772 + MGP_LPJ_P0042964 Clec16a protein_coding nonsense_mediated_decay MGP_LPJ_T0042965.1 MGP_LPJ_G0022411.1 mouse_genomes_project 16 7369795 7517413 + MGP_LPJ_P0042965 Clec16a protein_coding protein_coding MGP_LPJ_T0042966.1 MGP_LPJ_G0022411.1 mouse_genomes_project 16 7379977 7402247 + Clec16a protein_coding processed_transcript MGP_LPJ_T0042967.1 MGP_LPJ_G0022411.1 mouse_genomes_project 16 7401505 7411053 + Clec16a protein_coding processed_transcript MGP_LPJ_T0043298.1 MGP_LPJ_G0022486.1 mouse_genomes_project 16 14541494 14568899 + MGP_LPJ_P0043298 Smpd4 protein_coding protein_coding MGP_LPJ_T0043299.1 MGP_LPJ_G0022486.1 mouse_genomes_project 16 14541497 14563346 + Smpd4 protein_coding processed_transcript MGP_LPJ_T0043300.1 MGP_LPJ_G0022486.1 mouse_genomes_project 16 14541497 14568898 + MGP_LPJ_P0043300 Smpd4 protein_coding protein_coding MGP_LPJ_T0043301.1 MGP_LPJ_G0022486.1 mouse_genomes_project 16 14541497 14548797 + MGP_LPJ_P0043301 Smpd4 protein_coding protein_coding MGP_LPJ_T0043302.1 MGP_LPJ_G0022486.1 mouse_genomes_project 16 14541500 14548999 + MGP_LPJ_P0043302 Smpd4 protein_coding protein_coding MGP_LPJ_T0043303.1 MGP_LPJ_G0022486.1 mouse_genomes_project 16 14541500 14567418 + MGP_LPJ_P0043303 Smpd4 protein_coding protein_coding MGP_LPJ_T0043304.1 MGP_LPJ_G0022486.1 mouse_genomes_project 16 14541503 14546635 + Smpd4 protein_coding retained_intron MGP_LPJ_T0043305.1 MGP_LPJ_G0022486.1 mouse_genomes_project 16 14541503 14568898 + Smpd4 protein_coding retained_intron MGP_LPJ_T0043306.1 MGP_LPJ_G0022486.1 mouse_genomes_project 16 14541503 14544136 + Smpd4 protein_coding retained_intron MGP_LPJ_T0043307.1 MGP_LPJ_G0022486.1 mouse_genomes_project 16 14541503 14568898 + MGP_LPJ_P0043307 Smpd4 protein_coding protein_coding MGP_LPJ_T0043308.1 MGP_LPJ_G0022486.1 mouse_genomes_project 16 14541503 14548191 + MGP_LPJ_P0043308 Smpd4 protein_coding protein_coding MGP_LPJ_T0043309.1 MGP_LPJ_G0022486.1 mouse_genomes_project 16 14541514 14562596 + MGP_LPJ_P0043309 Smpd4 protein_coding nonsense_mediated_decay MGP_LPJ_T0043310.1 MGP_LPJ_G0022486.1 mouse_genomes_project 16 14541517 14549036 + MGP_LPJ_P0043310 Smpd4 protein_coding protein_coding MGP_LPJ_T0043311.1 MGP_LPJ_G0022486.1 mouse_genomes_project 16 14541521 14566219 + Smpd4 protein_coding retained_intron MGP_LPJ_T0043312.1 MGP_LPJ_G0022486.1 mouse_genomes_project 16 14541529 14548355 + MGP_LPJ_P0043312 Smpd4 protein_coding protein_coding MGP_LPJ_T0043313.1 MGP_LPJ_G0022486.1 mouse_genomes_project 16 14541657 14546297 + MGP_LPJ_P0043313 Smpd4 protein_coding protein_coding MGP_LPJ_T0043314.1 MGP_LPJ_G0022486.1 mouse_genomes_project 16 14543627 14566874 + MGP_LPJ_P0043314 Smpd4 protein_coding nonsense_mediated_decay MGP_LPJ_T0043315.1 MGP_LPJ_G0022486.1 mouse_genomes_project 16 14543627 14566874 + MGP_LPJ_P0043315 Smpd4 protein_coding protein_coding MGP_LPJ_T0043316.1 MGP_LPJ_G0022486.1 mouse_genomes_project 16 14543627 14566874 + MGP_LPJ_P0043316 Smpd4 protein_coding protein_coding MGP_LPJ_T0043317.1 MGP_LPJ_G0022486.1 mouse_genomes_project 16 14543627 14566874 + MGP_LPJ_P0043317 Smpd4 protein_coding protein_coding MGP_LPJ_T0043318.1 MGP_LPJ_G0022486.1 mouse_genomes_project 16 14543627 14566874 + MGP_LPJ_P0043318 Smpd4 protein_coding protein_coding MGP_LPJ_T0043319.1 MGP_LPJ_G0022486.1 mouse_genomes_project 16 14562392 14565133 + Smpd4 protein_coding retained_intron MGP_LPJ_T0043320.1 MGP_LPJ_G0022486.1 mouse_genomes_project 16 14562657 14565037 + Smpd4 protein_coding retained_intron MGP_LPJ_T0013173.1 MGP_LPJ_G0011264.1 mouse_genomes_project 16 49379366 49383473 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013179.1 MGP_LPJ_G0011270.1 mouse_genomes_project 16 60665802 60666313 + processed_pseudogene processed_pseudogene MGP_LPJ_T0042867.1 MGP_LPJ_G0022384.1 mouse_genomes_project 16 1527618 1571751 - MGP_LPJ_P0042867 Glyr1 protein_coding protein_coding MGP_LPJ_T0042868.1 MGP_LPJ_G0022384.1 mouse_genomes_project 16 1527618 1571751 - MGP_LPJ_P0042868 Glyr1 protein_coding protein_coding MGP_LPJ_T0100442.1 MGP_LPJ_G0038705.1 mouse_genomes_project 16 56850878 56851010 - Gm24039 snoRNA snoRNA MGP_LPJ_T0044564.1 MGP_LPJ_G0022797.1 mouse_genomes_project 16 56119938 56141967 - MGP_LPJ_P0044564 Nit2 protein_coding protein_coding MGP_LPJ_T0013168.1 MGP_LPJ_G0011259.1 mouse_genomes_project 16 43953580 43956552 - processed_pseudogene processed_pseudogene MGP_LPJ_T0043782.1 MGP_LPJ_G0022604.1 mouse_genomes_project 16 26438987 26545158 - MGP_LPJ_P0043782 Mb21d2 protein_coding protein_coding MGP_LPJ_T0006852.1 MGP_LPJ_G0005651.1 mouse_genomes_project 16 19042315 19044641 - Gm26744 lincRNA lincRNA MGP_LPJ_T0043817.1 MGP_LPJ_G0022613.1 mouse_genomes_project 16 28012519 28015613 - MGP_LPJ_P0043817 Gp5 protein_coding protein_coding MGP_LPJ_T0006884.1 MGP_LPJ_G0005677.1 mouse_genomes_project 16 76862218 76869660 - lincRNA lincRNA MGP_LPJ_T0006885.1 MGP_LPJ_G0005677.1 mouse_genomes_project 16 76864982 76869666 - lincRNA lincRNA MGP_LPJ_T0044211.1 MGP_LPJ_G0022709.1 mouse_genomes_project 16 36284589 36446253 + MGP_LPJ_P0044211 Gsk3b protein_coding protein_coding MGP_LPJ_T0044212.1 MGP_LPJ_G0022709.1 mouse_genomes_project 16 36285876 36440952 + MGP_LPJ_P0044212 Gsk3b protein_coding protein_coding MGP_LPJ_T0044213.1 MGP_LPJ_G0022709.1 mouse_genomes_project 16 36338729 36389884 + Gsk3b protein_coding processed_transcript MGP_LPJ_T0044214.1 MGP_LPJ_G0022709.1 mouse_genomes_project 16 36339685 36407793 + Gsk3b protein_coding retained_intron MGP_LPJ_T0045204.1 MGP_LPJ_G0022992.1 mouse_genomes_project 16 97620927 98233119 - MGP_LPJ_P0045204 Dscam protein_coding protein_coding MGP_LPJ_T0044209.1 MGP_LPJ_G0022707.1 mouse_genomes_project 16 36044989 36065433 + MGP_LPJ_P0044209 Lrrc58 protein_coding protein_coding MGP_LPJ_T0000150.1 MGP_LPJ_G0000111.1 mouse_genomes_project 16 16268025 16268509 - MGP_LPJ_P0000150 Iglv3 IG_V_gene IG_V_gene MGP_LPJ_T0044974.1 MGP_LPJ_G0022953.1 mouse_genomes_project 16 92417227 92462591 - MGP_LPJ_P0044974 Cryzl1 protein_coding protein_coding MGP_LPJ_T0044975.1 MGP_LPJ_G0022953.1 mouse_genomes_project 16 92417247 92462418 - MGP_LPJ_P0044975 Cryzl1 protein_coding protein_coding MGP_LPJ_T0044976.1 MGP_LPJ_G0022953.1 mouse_genomes_project 16 92417431 92422834 - Cryzl1 protein_coding processed_transcript MGP_LPJ_T0044977.1 MGP_LPJ_G0022953.1 mouse_genomes_project 16 92417511 92462239 - MGP_LPJ_P0044977 Cryzl1 protein_coding protein_coding MGP_LPJ_T0044978.1 MGP_LPJ_G0022953.1 mouse_genomes_project 16 92422002 92440378 - MGP_LPJ_P0044978 Cryzl1 protein_coding protein_coding MGP_LPJ_T0044979.1 MGP_LPJ_G0022953.1 mouse_genomes_project 16 92422028 92450509 - MGP_LPJ_P0044979 Cryzl1 protein_coding protein_coding MGP_LPJ_T0044980.1 MGP_LPJ_G0022953.1 mouse_genomes_project 16 92424099 92462317 - MGP_LPJ_P0044980 Cryzl1 protein_coding protein_coding MGP_LPJ_T0044981.1 MGP_LPJ_G0022953.1 mouse_genomes_project 16 92424352 92428942 - Cryzl1 protein_coding retained_intron MGP_LPJ_T0044982.1 MGP_LPJ_G0022953.1 mouse_genomes_project 16 92438124 92462216 - Cryzl1 protein_coding retained_intron MGP_LPJ_T0044983.1 MGP_LPJ_G0022953.1 mouse_genomes_project 16 92447554 92462214 - Cryzl1 protein_coding retained_intron MGP_LPJ_T0044984.1 MGP_LPJ_G0022953.1 mouse_genomes_project 16 92448232 92462224 - Cryzl1 protein_coding processed_transcript MGP_LPJ_T0044765.1 MGP_LPJ_G0022874.1 mouse_genomes_project 16 85102517 85131353 + MGP_LPJ_P0044765 Gabpa protein_coding protein_coding MGP_LPJ_T0044766.1 MGP_LPJ_G0022874.1 mouse_genomes_project 16 85102716 85133817 + MGP_LPJ_P0044766 Gabpa protein_coding protein_coding MGP_LPJ_T0044767.1 MGP_LPJ_G0022874.1 mouse_genomes_project 16 85121106 85130467 + Gabpa protein_coding processed_transcript MGP_LPJ_T0044768.1 MGP_LPJ_G0022874.1 mouse_genomes_project 16 85126077 85127616 + Gabpa protein_coding retained_intron MGP_LPJ_T0044769.1 MGP_LPJ_G0022874.1 mouse_genomes_project 16 85130082 85132503 + Gabpa protein_coding processed_transcript MGP_LPJ_T0044877.1 MGP_LPJ_G0022932.1 mouse_genomes_project 16 91390866 91402174 + Mrap protein_coding processed_transcript MGP_LPJ_T0044878.1 MGP_LPJ_G0022932.1 mouse_genomes_project 16 91390866 91405492 + Mrap protein_coding processed_transcript MGP_LPJ_T0044879.1 MGP_LPJ_G0022932.1 mouse_genomes_project 16 91390866 91405003 + Mrap protein_coding processed_transcript MGP_LPJ_T0044880.1 MGP_LPJ_G0022932.1 mouse_genomes_project 16 91390866 91405492 + MGP_LPJ_P0044880 Mrap protein_coding protein_coding MGP_LPJ_T0042954.1 MGP_LPJ_G0022410.1 mouse_genomes_project 16 7266144 7309712 - MGP_LPJ_P0042954 Dexi protein_coding protein_coding MGP_LPJ_T0042955.1 MGP_LPJ_G0022410.1 mouse_genomes_project 16 7296871 7298474 - Dexi protein_coding processed_transcript MGP_LPJ_T0042956.1 MGP_LPJ_G0022410.1 mouse_genomes_project 16 7296871 7309712 - MGP_LPJ_P0042956 Dexi protein_coding protein_coding MGP_LPJ_T0101282.1 MGP_LPJ_G0039513.1 mouse_genomes_project 16 48092150 48092521 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101283.1 MGP_LPJ_G0039513.1 mouse_genomes_project 16 48092275 48093284 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0003662.1 MGP_LPJ_G0003318.1 mouse_genomes_project 16 10271419 10293665 - antisense antisense MGP_LPJ_T0003663.1 MGP_LPJ_G0003318.1 mouse_genomes_project 16 10285890 10293661 - antisense antisense MGP_LPJ_T0013107.1 MGP_LPJ_G0011198.1 mouse_genomes_project 16 478344 478422 - processed_pseudogene processed_pseudogene MGP_LPJ_T0043450.1 MGP_LPJ_G0022515.1 mouse_genomes_project 16 15569959 15575216 - MGP_LPJ_P0043450 Tbx1 protein_coding protein_coding MGP_LPJ_T0013140.1 MGP_LPJ_G0011231.1 mouse_genomes_project 16 17615595 17615878 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098188.1 MGP_LPJ_G0036469.1 mouse_genomes_project 16 36030167 36030283 + n-R5s34 rRNA rRNA MGP_LPJ_T0017428.1 MGP_LPJ_G0015228.1 mouse_genomes_project 16 15053881 15055030 + Gm15954 processed_transcript processed_transcript MGP_LPJ_T0013172.1 MGP_LPJ_G0011263.1 mouse_genomes_project 16 48797101 48798091 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010123.1 MGP_LPJ_G0008241.1 mouse_genomes_project 16 7690118 7690244 + Gm26268 miRNA miRNA MGP_LPJ_T0006837.1 MGP_LPJ_G0005639.1 mouse_genomes_project 16 7608399 7613963 + Gm26822 lincRNA lincRNA MGP_LPJ_T0043260.1 MGP_LPJ_G0022479.1 mouse_genomes_project 16 14362116 14397829 + MGP_LPJ_P0043260 Crkl protein_coding protein_coding MGP_LPJ_T0043321.1 MGP_LPJ_G0022487.1 mouse_genomes_project 16 14570540 14573486 + Ccdc74a protein_coding retained_intron MGP_LPJ_T0043322.1 MGP_LPJ_G0022487.1 mouse_genomes_project 16 14570545 14573312 + MGP_LPJ_P0043322 Ccdc74a protein_coding nonsense_mediated_decay MGP_LPJ_T0043323.1 MGP_LPJ_G0022487.1 mouse_genomes_project 16 14570545 14574809 + MGP_LPJ_P0043323 Ccdc74a protein_coding protein_coding MGP_LPJ_T0043324.1 MGP_LPJ_G0022487.1 mouse_genomes_project 16 14570621 14572544 + Ccdc74a protein_coding retained_intron MGP_LPJ_T0043325.1 MGP_LPJ_G0022487.1 mouse_genomes_project 16 14570634 14574808 + MGP_LPJ_P0043325 Ccdc74a protein_coding protein_coding MGP_LPJ_T0043326.1 MGP_LPJ_G0022487.1 mouse_genomes_project 16 14570635 14574480 + MGP_LPJ_P0043326 Ccdc74a protein_coding nonsense_mediated_decay MGP_LPJ_T0043327.1 MGP_LPJ_G0022487.1 mouse_genomes_project 16 14570683 14574809 + MGP_LPJ_P0043327 Ccdc74a protein_coding protein_coding MGP_LPJ_T0043328.1 MGP_LPJ_G0022487.1 mouse_genomes_project 16 14570688 14574518 + MGP_LPJ_P0043328 Ccdc74a protein_coding protein_coding MGP_LPJ_T0043329.1 MGP_LPJ_G0022487.1 mouse_genomes_project 16 14570743 14571932 + Ccdc74a protein_coding retained_intron MGP_LPJ_T0043330.1 MGP_LPJ_G0022487.1 mouse_genomes_project 16 14570770 14574809 + MGP_LPJ_P0043330 Ccdc74a protein_coding nonsense_mediated_decay MGP_LPJ_T0044851.1 MGP_LPJ_G0022923.1 mouse_genomes_project 16 89960423 89961913 - MGP_LPJ_P0044851 Krtap6-2 protein_coding protein_coding MGP_LPJ_T0010134.1 MGP_LPJ_G0008252.1 mouse_genomes_project 16 15277498 15277577 - Mir1306 miRNA miRNA MGP_LPJ_T0044210.1 MGP_LPJ_G0022708.1 mouse_genomes_project 16 36095415 36196742 + MGP_LPJ_P0044210 Gpr156 protein_coding protein_coding MGP_LPJ_T0044843.1 MGP_LPJ_G0022916.1 mouse_genomes_project 16 89688076 89688565 + MGP_LPJ_P0044843 Gm6358 protein_coding protein_coding MGP_LPJ_T0044844.1 MGP_LPJ_G0022916.1 mouse_genomes_project 16 89688169 89688325 + MGP_LPJ_P0044844 Gm6358 protein_coding protein_coding MGP_LPJ_T0010153.1 MGP_LPJ_G0008271.1 mouse_genomes_project 16 39516057 39516117 + miRNA miRNA MGP_LPJ_T0100444.1 MGP_LPJ_G0038707.1 mouse_genomes_project 16 60248097 60248174 + Gm23852 snoRNA snoRNA MGP_LPJ_T0045070.1 MGP_LPJ_G0022971.1 mouse_genomes_project 16 94972724 95015439 + MGP_LPJ_P0045070 Sim2 protein_coding protein_coding MGP_LPJ_T0044881.1 MGP_LPJ_G0022933.1 mouse_genomes_project 16 91408318 91473578 - MGP_LPJ_P0044881 Urb1 protein_coding protein_coding MGP_LPJ_T0044882.1 MGP_LPJ_G0022933.1 mouse_genomes_project 16 91425966 91431737 - Urb1 protein_coding retained_intron MGP_LPJ_T0044883.1 MGP_LPJ_G0022933.1 mouse_genomes_project 16 91442098 91473578 - Urb1 protein_coding retained_intron MGP_LPJ_T0044884.1 MGP_LPJ_G0022933.1 mouse_genomes_project 16 91460753 91473567 - Urb1 protein_coding retained_intron MGP_LPJ_T0044885.1 MGP_LPJ_G0022933.1 mouse_genomes_project 16 91465555 91473599 - Urb1 protein_coding retained_intron MGP_LPJ_T0044575.1 MGP_LPJ_G0022803.1 mouse_genomes_project 16 57356139 57417624 + MGP_LPJ_P0044575 Dcbld2 protein_coding protein_coding MGP_LPJ_T0044576.1 MGP_LPJ_G0022803.1 mouse_genomes_project 16 57403153 57413275 + Dcbld2 protein_coding processed_transcript MGP_LPJ_T0044577.1 MGP_LPJ_G0022803.1 mouse_genomes_project 16 57403808 57404509 + Dcbld2 protein_coding processed_transcript MGP_LPJ_T0044578.1 MGP_LPJ_G0022803.1 mouse_genomes_project 16 57404339 57411718 + Dcbld2 protein_coding retained_intron MGP_LPJ_T0044579.1 MGP_LPJ_G0022803.1 mouse_genomes_project 16 57408153 57413724 + Dcbld2 protein_coding processed_transcript MGP_LPJ_T0044580.1 MGP_LPJ_G0022803.1 mouse_genomes_project 16 57408197 57414621 + Dcbld2 protein_coding retained_intron MGP_LPJ_T0044581.1 MGP_LPJ_G0022803.1 mouse_genomes_project 16 57408199 57414684 + Dcbld2 protein_coding retained_intron MGP_LPJ_T0043658.1 MGP_LPJ_G0022567.1 mouse_genomes_project 16 19220660 19261682 + MGP_LPJ_P0043658 Senp2 protein_coding protein_coding MGP_LPJ_T0044332.1 MGP_LPJ_G0022737.1 mouse_genomes_project 16 42621561 42679951 + MGP_LPJ_P0044332 Usf3 protein_coding protein_coding MGP_LPJ_T0044333.1 MGP_LPJ_G0022737.1 mouse_genomes_project 16 42621972 42667954 + Usf3 protein_coding retained_intron MGP_LPJ_T0044334.1 MGP_LPJ_G0022737.1 mouse_genomes_project 16 42621972 42665384 + MGP_LPJ_P0044334 Usf3 protein_coding protein_coding MGP_LPJ_T0044335.1 MGP_LPJ_G0022737.1 mouse_genomes_project 16 42621972 42679949 + MGP_LPJ_P0044335 Usf3 protein_coding protein_coding MGP_LPJ_T0100458.1 MGP_LPJ_G0038721.1 mouse_genomes_project 16 88187901 88187989 - Gm23994 snoRNA snoRNA MGP_LPJ_T0046579.1 MGP_LPJ_G0023398.1 mouse_genomes_project 17 31588016 31615190 + MGP_LPJ_P0046579 Pknox1 protein_coding protein_coding MGP_LPJ_T0046580.1 MGP_LPJ_G0023398.1 mouse_genomes_project 17 31589764 31617392 + MGP_LPJ_P0046580 Pknox1 protein_coding protein_coding MGP_LPJ_T0046581.1 MGP_LPJ_G0023398.1 mouse_genomes_project 17 31589908 31617388 + MGP_LPJ_P0046581 Pknox1 protein_coding protein_coding MGP_LPJ_T0046582.1 MGP_LPJ_G0023398.1 mouse_genomes_project 17 31599418 31599845 + Pknox1 protein_coding processed_transcript MGP_LPJ_T0046583.1 MGP_LPJ_G0023398.1 mouse_genomes_project 17 31604138 31608919 + Pknox1 protein_coding retained_intron MGP_LPJ_T0046584.1 MGP_LPJ_G0023398.1 mouse_genomes_project 17 31612446 31613293 + Pknox1 protein_coding retained_intron MGP_LPJ_T0013200.1 MGP_LPJ_G0011291.1 mouse_genomes_project 17 8981765 8982059 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099222.1 MGP_LPJ_G0037485.1 mouse_genomes_project 17 45004796 45004939 + Gm25135 snRNA snRNA MGP_LPJ_T0006918.1 MGP_LPJ_G0005700.1 mouse_genomes_project 17 20279550 20287382 - 9330136K24Rik lincRNA lincRNA MGP_LPJ_T0101921.1 MGP_LPJ_G0039958.1 mouse_genomes_project 17 16997755 16997881 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0101926.1 MGP_LPJ_G0039963.1 mouse_genomes_project 17 18355466 18395926 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0046939.1 MGP_LPJ_G0023484.1 mouse_genomes_project 17 34755164 34762049 - MGP_LPJ_P0046939 Btnl4 protein_coding protein_coding MGP_LPJ_T0101982.1 MGP_LPJ_G0040019.1 mouse_genomes_project 17 38324377 38325304 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0046270.1 MGP_LPJ_G0023329.1 mouse_genomes_project 17 27138254 27140412 - MGP_LPJ_P0046270 AI413582 protein_coding protein_coding MGP_LPJ_T0046271.1 MGP_LPJ_G0023329.1 mouse_genomes_project 17 27138450 27140388 - MGP_LPJ_P0046271 AI413582 protein_coding nonsense_mediated_decay MGP_LPJ_T0046272.1 MGP_LPJ_G0023329.1 mouse_genomes_project 17 27138452 27140429 - AI413582 protein_coding retained_intron MGP_LPJ_T0046273.1 MGP_LPJ_G0023329.1 mouse_genomes_project 17 27139361 27140347 - AI413582 protein_coding processed_transcript MGP_LPJ_T0045684.1 MGP_LPJ_G0023181.1 mouse_genomes_project 17 23027742 23030126 - MGP_LPJ_P0045684 Prss33 protein_coding protein_coding MGP_LPJ_T0045685.1 MGP_LPJ_G0023181.1 mouse_genomes_project 17 23028122 23030122 - MGP_LPJ_P0045685 Prss33 protein_coding nonsense_mediated_decay MGP_LPJ_T0045686.1 MGP_LPJ_G0023181.1 mouse_genomes_project 17 23029050 23030439 - Prss33 protein_coding retained_intron MGP_LPJ_T0047888.1 MGP_LPJ_G0023765.1 mouse_genomes_project 17 49553193 49563721 + MGP_LPJ_P0047888 Frs3 protein_coding protein_coding MGP_LPJ_T0047891.1 MGP_LPJ_G0023765.1 mouse_genomes_project 17 49559396 49568456 + MGP_LPJ_P0047891 Frs3 protein_coding protein_coding MGP_LPJ_T0047892.1 MGP_LPJ_G0023765.1 mouse_genomes_project 17 49559423 49561868 + Frs3 protein_coding processed_transcript MGP_LPJ_T0047893.1 MGP_LPJ_G0023765.1 mouse_genomes_project 17 49563728 49565045 + Frs3 protein_coding processed_transcript MGP_LPJ_T0047894.1 MGP_LPJ_G0023765.1 mouse_genomes_project 17 49566234 49568454 + Frs3 protein_coding processed_transcript MGP_LPJ_T0046063.1 MGP_LPJ_G0023279.1 mouse_genomes_project 17 25228625 25231351 - MGP_LPJ_P0046063 Stub1 protein_coding protein_coding MGP_LPJ_T0003734.1 MGP_LPJ_G0003367.1 mouse_genomes_project 17 22945351 22957498 + antisense antisense MGP_LPJ_T0047446.1 MGP_LPJ_G0023596.1 mouse_genomes_project 17 37840162 37846073 - MGP_LPJ_P0047446 Znrd1 protein_coding protein_coding MGP_LPJ_T0047447.1 MGP_LPJ_G0023596.1 mouse_genomes_project 17 37840164 37846124 - MGP_LPJ_P0047447 Znrd1 protein_coding protein_coding MGP_LPJ_T0047448.1 MGP_LPJ_G0023596.1 mouse_genomes_project 17 37840217 37845909 - MGP_LPJ_P0047448 Znrd1 protein_coding protein_coding MGP_LPJ_T0047449.1 MGP_LPJ_G0023596.1 mouse_genomes_project 17 37840249 37846150 - Znrd1 protein_coding processed_transcript MGP_LPJ_T0006988.1 MGP_LPJ_G0005751.1 mouse_genomes_project 17 72504987 72509210 + C030034I22Rik lincRNA lincRNA MGP_LPJ_T0006989.1 MGP_LPJ_G0005751.1 mouse_genomes_project 17 72505046 72506528 + C030034I22Rik lincRNA lincRNA MGP_LPJ_T0046244.1 MGP_LPJ_G0023320.1 mouse_genomes_project 17 26453136 26523063 + MGP_LPJ_P0046244 Ggnbp1 protein_coding protein_coding MGP_LPJ_T0046245.1 MGP_LPJ_G0023320.1 mouse_genomes_project 17 26505001 26513623 + Ggnbp1 protein_coding retained_intron MGP_LPJ_T0046246.1 MGP_LPJ_G0023320.1 mouse_genomes_project 17 26505012 26523063 + MGP_LPJ_P0046246 Ggnbp1 protein_coding protein_coding MGP_LPJ_T0046247.1 MGP_LPJ_G0023320.1 mouse_genomes_project 17 26505028 26509471 + Ggnbp1 protein_coding processed_transcript MGP_LPJ_T0046252.1 MGP_LPJ_G0023320.1 mouse_genomes_project 17 26516047 26523063 + MGP_LPJ_P0046252 Ggnbp1 protein_coding protein_coding MGP_LPJ_T0046253.1 MGP_LPJ_G0023320.1 mouse_genomes_project 17 26517135 26521538 + Ggnbp1 protein_coding retained_intron MGP_LPJ_T0045849.1 MGP_LPJ_G0023227.1 mouse_genomes_project 17 24050922 24061178 + MGP_LPJ_P0045849 Rpl3l protein_coding unknown_likely_coding MGP_LPJ_T0045850.1 MGP_LPJ_G0023227.1 mouse_genomes_project 17 24051094 24061265 + MGP_LPJ_P0045850 Rpl3l protein_coding protein_coding MGP_LPJ_T0045851.1 MGP_LPJ_G0023227.1 mouse_genomes_project 17 24051448 24058487 + MGP_LPJ_P0045851 Rpl3l protein_coding protein_coding MGP_LPJ_T0045852.1 MGP_LPJ_G0023227.1 mouse_genomes_project 17 24057806 24061265 + MGP_LPJ_P0045852 Rpl3l protein_coding protein_coding MGP_LPJ_T0010185.1 MGP_LPJ_G0008303.1 mouse_genomes_project 17 15830467 15830537 + Mir99b miRNA miRNA MGP_LPJ_T0048483.1 MGP_LPJ_G0023966.1 mouse_genomes_project 17 83947764 83955899 - MGP_LPJ_P0048483 Srsf7 protein_coding protein_coding MGP_LPJ_T0045551.1 MGP_LPJ_G0023120.1 mouse_genomes_project 17 19102266 19123015 - MGP_LPJ_P0045551 Vmn2r108 protein_coding protein_coding MGP_LPJ_T0100468.1 MGP_LPJ_G0038731.1 mouse_genomes_project 17 24658301 24658438 + Gm25921 snoRNA snoRNA MGP_LPJ_T0010223.1 MGP_LPJ_G0008341.1 mouse_genomes_project 17 35733085 35733202 + Mir8094 miRNA miRNA MGP_LPJ_T0099232.1 MGP_LPJ_G0037495.1 mouse_genomes_project 17 68975154 68975261 + Gm23264 snRNA snRNA MGP_LPJ_T0099223.1 MGP_LPJ_G0037486.1 mouse_genomes_project 17 47293256 47293337 + Gm25008 snRNA snRNA MGP_LPJ_T0047434.1 MGP_LPJ_G0023591.1 mouse_genomes_project 17 37752898 37761141 + MGP_LPJ_P0047434 Trim10 protein_coding protein_coding MGP_LPJ_T0045842.1 MGP_LPJ_G0023225.1 mouse_genomes_project 17 24044774 24045251 + protein_coding retained_intron MGP_LPJ_T0045858.1 MGP_LPJ_G0023232.1 mouse_genomes_project 17 24180481 24184011 + MGP_LPJ_P0045858 Hagh protein_coding protein_coding MGP_LPJ_T0045859.1 MGP_LPJ_G0023232.1 mouse_genomes_project 17 24180484 24194853 + MGP_LPJ_P0045859 Hagh protein_coding protein_coding MGP_LPJ_T0045860.1 MGP_LPJ_G0023232.1 mouse_genomes_project 17 24180498 24194856 + MGP_LPJ_P0045860 Hagh protein_coding protein_coding MGP_LPJ_T0045861.1 MGP_LPJ_G0023232.1 mouse_genomes_project 17 24180572 24190816 + MGP_LPJ_P0045861 Hagh protein_coding protein_coding MGP_LPJ_T0045862.1 MGP_LPJ_G0023232.1 mouse_genomes_project 17 24188038 24195010 + Hagh protein_coding processed_transcript MGP_LPJ_T0048289.1 MGP_LPJ_G0023908.1 mouse_genomes_project 17 73096251 73981031 + MGP_LPJ_P0048289 Dlgap1 protein_coding protein_coding MGP_LPJ_T0048290.1 MGP_LPJ_G0023908.1 mouse_genomes_project 17 73096424 73979045 + MGP_LPJ_P0048290 Dlgap1 protein_coding protein_coding MGP_LPJ_T0048291.1 MGP_LPJ_G0023908.1 mouse_genomes_project 17 73096546 73652091 + Dlgap1 protein_coding retained_intron MGP_LPJ_T0048292.1 MGP_LPJ_G0023908.1 mouse_genomes_project 17 73096546 73208284 + Dlgap1 protein_coding retained_intron MGP_LPJ_T0048293.1 MGP_LPJ_G0023908.1 mouse_genomes_project 17 73096551 73808158 + Dlgap1 protein_coding retained_intron MGP_LPJ_T0048294.1 MGP_LPJ_G0023908.1 mouse_genomes_project 17 73096565 73734144 + Dlgap1 protein_coding retained_intron MGP_LPJ_T0048295.1 MGP_LPJ_G0023908.1 mouse_genomes_project 17 73096565 73975117 + MGP_LPJ_P0048295 Dlgap1 protein_coding protein_coding MGP_LPJ_T0048296.1 MGP_LPJ_G0023908.1 mouse_genomes_project 17 73548462 73979420 + MGP_LPJ_P0048296 Dlgap1 protein_coding protein_coding MGP_LPJ_T0048297.1 MGP_LPJ_G0023908.1 mouse_genomes_project 17 73649315 73977555 + MGP_LPJ_P0048297 Dlgap1 protein_coding protein_coding MGP_LPJ_T0048298.1 MGP_LPJ_G0023908.1 mouse_genomes_project 17 73655142 73735523 + Dlgap1 protein_coding retained_intron MGP_LPJ_T0048299.1 MGP_LPJ_G0023908.1 mouse_genomes_project 17 73655201 73941903 + Dlgap1 protein_coding retained_intron MGP_LPJ_T0048300.1 MGP_LPJ_G0023908.1 mouse_genomes_project 17 73655201 73981027 + MGP_LPJ_P0048300 Dlgap1 protein_coding protein_coding MGP_LPJ_T0048301.1 MGP_LPJ_G0023908.1 mouse_genomes_project 17 73655210 73977866 + MGP_LPJ_P0048301 Dlgap1 protein_coding protein_coding MGP_LPJ_T0048302.1 MGP_LPJ_G0023908.1 mouse_genomes_project 17 73655227 73977623 + MGP_LPJ_P0048302 Dlgap1 protein_coding protein_coding MGP_LPJ_T0048303.1 MGP_LPJ_G0023908.1 mouse_genomes_project 17 73698194 73868200 + Dlgap1 protein_coding retained_intron MGP_LPJ_T0048304.1 MGP_LPJ_G0023908.1 mouse_genomes_project 17 73698429 73975414 + MGP_LPJ_P0048304 Dlgap1 protein_coding protein_coding MGP_LPJ_T0048305.1 MGP_LPJ_G0023908.1 mouse_genomes_project 17 73732319 73981032 + MGP_LPJ_P0048305 Dlgap1 protein_coding unknown_likely_coding MGP_LPJ_T0046907.1 MGP_LPJ_G0023474.1 mouse_genomes_project 17 34475385 34487996 + MGP_LPJ_P0046907 Tap2 protein_coding protein_coding MGP_LPJ_T0046908.1 MGP_LPJ_G0023474.1 mouse_genomes_project 17 34475938 34477227 + MGP_LPJ_P0046908 Tap2 protein_coding protein_coding MGP_LPJ_T0046909.1 MGP_LPJ_G0023474.1 mouse_genomes_project 17 34476425 34487993 + Tap2 protein_coding retained_intron MGP_LPJ_T0046910.1 MGP_LPJ_G0023474.1 mouse_genomes_project 17 34476958 34477426 + MGP_LPJ_P0046910 Tap2 protein_coding protein_coding MGP_LPJ_T0046911.1 MGP_LPJ_G0023474.1 mouse_genomes_project 17 34479392 34480907 + Tap2 protein_coding processed_transcript MGP_LPJ_T0101958.1 MGP_LPJ_G0039995.1 mouse_genomes_project 17 36538810 36543841 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0045841.1 MGP_LPJ_G0023224.1 mouse_genomes_project 17 24034011 24036229 - MGP_LPJ_P0045841 Rnf151 protein_coding protein_coding MGP_LPJ_T0047572.1 MGP_LPJ_G0023673.1 mouse_genomes_project 17 42374270 42388593 - MGP_LPJ_P0047572 Cenpq protein_coding protein_coding MGP_LPJ_T0046392.1 MGP_LPJ_G0023353.1 mouse_genomes_project 17 28270351 28308967 - MGP_LPJ_P0046392 Srpk1 protein_coding protein_coding MGP_LPJ_T0046393.1 MGP_LPJ_G0023353.1 mouse_genomes_project 17 28272916 28293211 - MGP_LPJ_P0046393 Srpk1 protein_coding nonsense_mediated_decay MGP_LPJ_T0046394.1 MGP_LPJ_G0023353.1 mouse_genomes_project 17 28273314 28275751 - Srpk1 protein_coding retained_intron MGP_LPJ_T0046395.1 MGP_LPJ_G0023353.1 mouse_genomes_project 17 28279792 28285105 - Srpk1 protein_coding retained_intron MGP_LPJ_T0046396.1 MGP_LPJ_G0023353.1 mouse_genomes_project 17 28284554 28285442 - Srpk1 protein_coding retained_intron MGP_LPJ_T0046397.1 MGP_LPJ_G0023353.1 mouse_genomes_project 17 28286725 28308897 - Srpk1 protein_coding retained_intron MGP_LPJ_T0046398.1 MGP_LPJ_G0023353.1 mouse_genomes_project 17 28306588 28308918 - MGP_LPJ_P0046398 Srpk1 protein_coding protein_coding MGP_LPJ_T0006991.1 MGP_LPJ_G0005753.1 mouse_genomes_project 17 74037351 74038936 - Gm26510 lincRNA lincRNA MGP_LPJ_T0006992.1 MGP_LPJ_G0005753.1 mouse_genomes_project 17 74037354 74094680 - Gm26510 lincRNA lincRNA MGP_LPJ_T0048539.1 MGP_LPJ_G0023994.1 mouse_genomes_project 17 88654341 88747150 - MGP_LPJ_P0048539 Lrpprc protein_coding protein_coding MGP_LPJ_T0048540.1 MGP_LPJ_G0023994.1 mouse_genomes_project 17 88662849 88681250 - Lrpprc protein_coding processed_transcript MGP_LPJ_T0048541.1 MGP_LPJ_G0023994.1 mouse_genomes_project 17 88681245 88703677 - MGP_LPJ_P0048541 Lrpprc protein_coding nonsense_mediated_decay MGP_LPJ_T0048542.1 MGP_LPJ_G0023994.1 mouse_genomes_project 17 88701195 88703677 - Lrpprc protein_coding retained_intron MGP_LPJ_T0048543.1 MGP_LPJ_G0023994.1 mouse_genomes_project 17 88720631 88747381 - Lrpprc protein_coding retained_intron MGP_LPJ_T0048544.1 MGP_LPJ_G0023994.1 mouse_genomes_project 17 88721792 88747154 - Lrpprc protein_coding retained_intron MGP_LPJ_T0048545.1 MGP_LPJ_G0023994.1 mouse_genomes_project 17 88724640 88734135 - Lrpprc protein_coding processed_transcript MGP_LPJ_T0046653.1 MGP_LPJ_G0023416.1 mouse_genomes_project 17 32697499 32709962 + MGP_LPJ_P0046653 Cyp4f37 protein_coding protein_coding MGP_LPJ_T0101939.1 MGP_LPJ_G0039976.1 mouse_genomes_project 17 20051110 20051846 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0047200.1 MGP_LPJ_G0023535.1 mouse_genomes_project 17 35644688 35645556 - Aif1 protein_coding retained_intron MGP_LPJ_T0047201.1 MGP_LPJ_G0023535.1 mouse_genomes_project 17 35644688 35646755 - MGP_LPJ_P0047201 Aif1 protein_coding protein_coding MGP_LPJ_T0047202.1 MGP_LPJ_G0023535.1 mouse_genomes_project 17 35644689 35652224 - MGP_LPJ_P0047202 Aif1 protein_coding protein_coding MGP_LPJ_T0047203.1 MGP_LPJ_G0023535.1 mouse_genomes_project 17 35644691 35647214 - MGP_LPJ_P0047203 Aif1 protein_coding protein_coding MGP_LPJ_T0047204.1 MGP_LPJ_G0023535.1 mouse_genomes_project 17 35644693 35652291 - Aif1 protein_coding processed_transcript MGP_LPJ_T0047205.1 MGP_LPJ_G0023535.1 mouse_genomes_project 17 35645220 35646567 - MGP_LPJ_P0047205 Aif1 protein_coding protein_coding MGP_LPJ_T0047206.1 MGP_LPJ_G0023535.1 mouse_genomes_project 17 35646465 35652224 - Aif1 protein_coding retained_intron MGP_LPJ_T0047727.1 MGP_LPJ_G0023714.1 mouse_genomes_project 17 47886307 47920017 - MGP_LPJ_P0047727 Polh protein_coding protein_coding MGP_LPJ_T0048224.1 MGP_LPJ_G0023889.1 mouse_genomes_project 17 68650910 68674339 + MGP_LPJ_P0048224 Ppp4r1 protein_coding protein_coding MGP_LPJ_T0048225.1 MGP_LPJ_G0023889.1 mouse_genomes_project 17 68651117 68683830 + MGP_LPJ_P0048225 Ppp4r1 protein_coding protein_coding MGP_LPJ_T0048226.1 MGP_LPJ_G0023889.1 mouse_genomes_project 17 68670476 68680986 + Ppp4r1 protein_coding processed_transcript MGP_LPJ_T0048227.1 MGP_LPJ_G0023889.1 mouse_genomes_project 17 68673171 68680959 + Ppp4r1 protein_coding retained_intron MGP_LPJ_T0048228.1 MGP_LPJ_G0023889.1 mouse_genomes_project 17 68673541 68713257 + MGP_LPJ_P0048228 Ppp4r1 protein_coding protein_coding MGP_LPJ_T0048229.1 MGP_LPJ_G0023889.1 mouse_genomes_project 17 68673542 68713253 + MGP_LPJ_P0048229 Ppp4r1 protein_coding protein_coding MGP_LPJ_T0048230.1 MGP_LPJ_G0023889.1 mouse_genomes_project 17 68673586 68713252 + MGP_LPJ_P0048230 Ppp4r1 protein_coding nonsense_mediated_decay MGP_LPJ_T0048231.1 MGP_LPJ_G0023889.1 mouse_genomes_project 17 68673637 68684056 + MGP_LPJ_P0048231 Ppp4r1 protein_coding protein_coding MGP_LPJ_T0048232.1 MGP_LPJ_G0023889.1 mouse_genomes_project 17 68687364 68702429 + Ppp4r1 protein_coding processed_transcript MGP_LPJ_T0048233.1 MGP_LPJ_G0023889.1 mouse_genomes_project 17 68690513 68713187 + Ppp4r1 protein_coding processed_transcript MGP_LPJ_T0048234.1 MGP_LPJ_G0023889.1 mouse_genomes_project 17 68695934 68704545 + MGP_LPJ_P0048234 Ppp4r1 protein_coding nonsense_mediated_decay MGP_LPJ_T0048235.1 MGP_LPJ_G0023889.1 mouse_genomes_project 17 68700349 68704481 + Ppp4r1 protein_coding retained_intron MGP_LPJ_T0048236.1 MGP_LPJ_G0023889.1 mouse_genomes_project 17 68709220 68710312 + MGP_LPJ_P0048236 Ppp4r1 protein_coding protein_coding MGP_LPJ_T0047689.1 MGP_LPJ_G0023709.1 mouse_genomes_project 17 47714888 47732122 - MGP_LPJ_P0047689 Vegfa protein_coding protein_coding MGP_LPJ_T0047690.1 MGP_LPJ_G0023709.1 mouse_genomes_project 17 47714888 47731568 - MGP_LPJ_P0047690 Vegfa protein_coding protein_coding MGP_LPJ_T0047691.1 MGP_LPJ_G0023709.1 mouse_genomes_project 17 47714891 47732130 - MGP_LPJ_P0047691 Vegfa protein_coding protein_coding MGP_LPJ_T0047692.1 MGP_LPJ_G0023709.1 mouse_genomes_project 17 47716404 47724587 - Vegfa protein_coding retained_intron MGP_LPJ_T0047693.1 MGP_LPJ_G0023709.1 mouse_genomes_project 17 47718265 47732122 - MGP_LPJ_P0047693 Vegfa protein_coding protein_coding MGP_LPJ_T0047694.1 MGP_LPJ_G0023709.1 mouse_genomes_project 17 47718328 47724604 - Vegfa protein_coding retained_intron MGP_LPJ_T0047695.1 MGP_LPJ_G0023709.1 mouse_genomes_project 17 47718434 47721095 - Vegfa protein_coding retained_intron MGP_LPJ_T0047696.1 MGP_LPJ_G0023709.1 mouse_genomes_project 17 47718553 47731109 - MGP_LPJ_P0047696 Vegfa protein_coding protein_coding MGP_LPJ_T0047697.1 MGP_LPJ_G0023709.1 mouse_genomes_project 17 47718555 47724525 - Vegfa protein_coding retained_intron MGP_LPJ_T0047698.1 MGP_LPJ_G0023709.1 mouse_genomes_project 17 47718580 47731109 - MGP_LPJ_P0047698 Vegfa protein_coding protein_coding MGP_LPJ_T0047699.1 MGP_LPJ_G0023709.1 mouse_genomes_project 17 47724918 47731109 - Vegfa protein_coding retained_intron MGP_LPJ_T0010203.1 MGP_LPJ_G0008321.1 mouse_genomes_project 17 26587533 26587600 + Mir7677 miRNA miRNA MGP_LPJ_T0013242.1 MGP_LPJ_G0011333.1 mouse_genomes_project 17 49476561 49479341 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006982.1 MGP_LPJ_G0005748.1 mouse_genomes_project 17 62554639 62697553 - Gm29051 lincRNA lincRNA MGP_LPJ_T0047882.1 MGP_LPJ_G0023763.1 mouse_genomes_project 17 49550901 49558654 - MGP_LPJ_P0047882 Prickle4 protein_coding nonsense_mediated_decay MGP_LPJ_T0017499.1 MGP_LPJ_G0015258.1 mouse_genomes_project 17 24943299 24947528 + 2810468N07Rik processed_transcript processed_transcript MGP_LPJ_T0045238.1 MGP_LPJ_G0023006.1 mouse_genomes_project 17 2206523 2315791 + Arid1b protein_coding processed_transcript MGP_LPJ_T0045239.1 MGP_LPJ_G0023006.1 mouse_genomes_project 17 2208933 2572390 + MGP_LPJ_P0045239 Arid1b protein_coding protein_coding MGP_LPJ_T0045240.1 MGP_LPJ_G0023006.1 mouse_genomes_project 17 2209089 2573407 + MGP_LPJ_P0045240 Arid1b protein_coding protein_coding MGP_LPJ_T0045241.1 MGP_LPJ_G0023006.1 mouse_genomes_project 17 2210423 2316244 + Arid1b protein_coding retained_intron MGP_LPJ_T0045242.1 MGP_LPJ_G0023006.1 mouse_genomes_project 17 2255465 2348775 + Arid1b protein_coding retained_intron MGP_LPJ_T0047214.1 MGP_LPJ_G0023540.1 mouse_genomes_project 17 35700982 35716602 - MGP_LPJ_P0047214 Nfkbil1 protein_coding protein_coding MGP_LPJ_T0047216.1 MGP_LPJ_G0023540.1 mouse_genomes_project 17 35701643 35702465 - Nfkbil1 protein_coding processed_transcript MGP_LPJ_T0048082.1 MGP_LPJ_G0023828.1 mouse_genomes_project 17 58616445 58625429 + MGP_LPJ_P0048082 Fem1a protein_coding protein_coding MGP_LPJ_T0101954.1 MGP_LPJ_G0039991.1 mouse_genomes_project 17 35226513 35254445 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0047497.1 MGP_LPJ_G0023612.1 mouse_genomes_project 17 38202031 38203132 - MGP_LPJ_P0047497 Olfr98 protein_coding protein_coding MGP_LPJ_T0045573.1 MGP_LPJ_G0023136.1 mouse_genomes_project 17 19976246 19978710 + MGP_LPJ_P0045573 Vmn1r235 protein_coding protein_coding MGP_LPJ_T0010234.1 MGP_LPJ_G0008352.1 mouse_genomes_project 17 59669501 59669558 - Mir6978 miRNA miRNA MGP_LPJ_T0048631.1 MGP_LPJ_G0024024.1 mouse_genomes_project 17 92961888 93013431 + MGP_LPJ_P0048631 Gtf2a1l protein_coding protein_coding MGP_LPJ_T0048632.1 MGP_LPJ_G0024024.1 mouse_genomes_project 17 92961924 92990498 + MGP_LPJ_P0048632 Gtf2a1l protein_coding protein_coding MGP_LPJ_T0047260.1 MGP_LPJ_G0023556.1 mouse_genomes_project 17 36201414 36209326 - MGP_LPJ_P0047260 Dpcr1 protein_coding protein_coding MGP_LPJ_T0047229.1 MGP_LPJ_G0023544.1 mouse_genomes_project 17 35744979 35751057 + MGP_LPJ_P0047229 protein_coding protein_coding MGP_LPJ_T0047230.1 MGP_LPJ_G0023544.1 mouse_genomes_project 17 35745349 35751057 + MGP_LPJ_P0047230 protein_coding unknown_likely_coding MGP_LPJ_T0011826.1 MGP_LPJ_G0009935.1 mouse_genomes_project 17 22705680 22709143 - MGP_LPJ_P0011826 Casp16-ps polymorphic_pseudogene polymorphic_pseudogene MGP_LPJ_T0011827.1 MGP_LPJ_G0009935.1 mouse_genomes_project 17 22705788 22709065 - MGP_LPJ_P0011827 Casp16-ps polymorphic_pseudogene protein_coding MGP_LPJ_T0011450.1 MGP_LPJ_G0009568.1 mouse_genomes_project 17 72694863 72695102 - Gm22967 misc_RNA misc_RNA MGP_LPJ_T0047488.1 MGP_LPJ_G0023603.1 mouse_genomes_project 17 37981802 37982848 - MGP_LPJ_P0047488 Olfr90 protein_coding protein_coding MGP_LPJ_T0099206.1 MGP_LPJ_G0037469.1 mouse_genomes_project 17 10673354 10673519 - Gm25730 snRNA snRNA MGP_LPJ_T0047548.1 MGP_LPJ_G0023653.1 mouse_genomes_project 17 39879963 39889676 + MGP_LPJ_P0047548 protein_coding protein_coding MGP_LPJ_T0045411.1 MGP_LPJ_G0023063.1 mouse_genomes_project 17 10487692 10500838 - MGP_LPJ_P0045411 protein_coding protein_coding MGP_LPJ_T0046794.1 MGP_LPJ_G0023453.1 mouse_genomes_project 17 34154321 34155274 + Rgl2 protein_coding retained_intron MGP_LPJ_T0046795.1 MGP_LPJ_G0023453.1 mouse_genomes_project 17 34154360 34162332 + MGP_LPJ_P0046795 Rgl2 protein_coding protein_coding MGP_LPJ_T0046796.1 MGP_LPJ_G0023453.1 mouse_genomes_project 17 34154682 34156985 + Rgl2 protein_coding processed_transcript MGP_LPJ_T0046797.1 MGP_LPJ_G0023453.1 mouse_genomes_project 17 34154752 34157150 + Rgl2 protein_coding retained_intron MGP_LPJ_T0046798.1 MGP_LPJ_G0023453.1 mouse_genomes_project 17 34155661 34156808 + Rgl2 protein_coding retained_intron MGP_LPJ_T0046799.1 MGP_LPJ_G0023453.1 mouse_genomes_project 17 34155670 34157292 + Rgl2 protein_coding processed_transcript MGP_LPJ_T0046800.1 MGP_LPJ_G0023453.1 mouse_genomes_project 17 34155686 34156725 + Rgl2 protein_coding retained_intron MGP_LPJ_T0046801.1 MGP_LPJ_G0023453.1 mouse_genomes_project 17 34155989 34157282 + Rgl2 protein_coding retained_intron MGP_LPJ_T0046802.1 MGP_LPJ_G0023453.1 mouse_genomes_project 17 34156830 34157996 + Rgl2 protein_coding retained_intron MGP_LPJ_T0046803.1 MGP_LPJ_G0023453.1 mouse_genomes_project 17 34156909 34157919 + Rgl2 protein_coding retained_intron MGP_LPJ_T0046804.1 MGP_LPJ_G0023453.1 mouse_genomes_project 17 34158703 34161869 + MGP_LPJ_P0046804 Rgl2 protein_coding protein_coding MGP_LPJ_T0046805.1 MGP_LPJ_G0023453.1 mouse_genomes_project 17 34160166 34161535 + Rgl2 protein_coding retained_intron MGP_LPJ_T0047517.1 MGP_LPJ_G0023628.1 mouse_genomes_project 17 38606759 38611633 - MGP_LPJ_P0047517 Olfr116 protein_coding protein_coding MGP_LPJ_T0045585.1 MGP_LPJ_G0023145.1 mouse_genomes_project 17 20440106 20449847 + MGP_LPJ_P0045585 Zfp983 protein_coding protein_coding MGP_LPJ_T0047443.1 MGP_LPJ_G0023595.1 mouse_genomes_project 17 37834164 37837521 - MGP_LPJ_P0047443 Ppp1r11 protein_coding protein_coding MGP_LPJ_T0047444.1 MGP_LPJ_G0023595.1 mouse_genomes_project 17 37835097 37837549 - MGP_LPJ_P0047444 Ppp1r11 protein_coding protein_coding MGP_LPJ_T0047445.1 MGP_LPJ_G0023595.1 mouse_genomes_project 17 37835162 37837146 - MGP_LPJ_P0047445 Ppp1r11 protein_coding protein_coding MGP_LPJ_T0101916.1 MGP_LPJ_G0039953.1 mouse_genomes_project 17 11162954 11165033 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0047847.1 MGP_LPJ_G0023755.1 mouse_genomes_project 17 49265141 49302514 + MGP_LPJ_P0047847 protein_coding protein_coding MGP_LPJ_T0047848.1 MGP_LPJ_G0023755.1 mouse_genomes_project 17 49265331 49303008 + MGP_LPJ_P0047848 protein_coding protein_coding MGP_LPJ_T0098196.1 MGP_LPJ_G0036477.1 mouse_genomes_project 17 32889636 32889747 - Gm25555 rRNA rRNA MGP_LPJ_T0013236.1 MGP_LPJ_G0011327.1 mouse_genomes_project 17 38955437 38956087 + processed_pseudogene processed_pseudogene MGP_LPJ_T0045534.1 MGP_LPJ_G0023103.1 mouse_genomes_project 17 16076782 19002309 + MGP_LPJ_P0045534 protein_coding protein_coding MGP_LPJ_T0047262.1 MGP_LPJ_G0023557.1 mouse_genomes_project 17 36221226 36234703 - MGP_LPJ_P0047262 Vars2 protein_coding protein_coding MGP_LPJ_T0047263.1 MGP_LPJ_G0023557.1 mouse_genomes_project 17 36221247 36231337 - Vars2 protein_coding retained_intron MGP_LPJ_T0047264.1 MGP_LPJ_G0023557.1 mouse_genomes_project 17 36221979 36228541 - MGP_LPJ_P0047264 Vars2 protein_coding nonsense_mediated_decay MGP_LPJ_T0047265.1 MGP_LPJ_G0023557.1 mouse_genomes_project 17 36222146 36228083 - MGP_LPJ_P0047265 Vars2 protein_coding nonsense_mediated_decay MGP_LPJ_T0047266.1 MGP_LPJ_G0023557.1 mouse_genomes_project 17 36222216 36224005 - Vars2 protein_coding retained_intron MGP_LPJ_T0047267.1 MGP_LPJ_G0023557.1 mouse_genomes_project 17 36222332 36223107 - Vars2 protein_coding retained_intron MGP_LPJ_T0047268.1 MGP_LPJ_G0023557.1 mouse_genomes_project 17 36225144 36225639 - Vars2 protein_coding retained_intron MGP_LPJ_T0047269.1 MGP_LPJ_G0023557.1 mouse_genomes_project 17 36225276 36227558 - MGP_LPJ_P0047269 Vars2 protein_coding nonsense_mediated_decay MGP_LPJ_T0047270.1 MGP_LPJ_G0023557.1 mouse_genomes_project 17 36225617 36227237 - Vars2 protein_coding retained_intron MGP_LPJ_T0047271.1 MGP_LPJ_G0023557.1 mouse_genomes_project 17 36229501 36233848 - Vars2 protein_coding retained_intron MGP_LPJ_T0047272.1 MGP_LPJ_G0023557.1 mouse_genomes_project 17 36231191 36234651 - Vars2 protein_coding retained_intron MGP_LPJ_T0047273.1 MGP_LPJ_G0023557.1 mouse_genomes_project 17 36231275 36234660 - MGP_LPJ_P0047273 Vars2 protein_coding nonsense_mediated_decay MGP_LPJ_T0047235.1 MGP_LPJ_G0023547.1 mouse_genomes_project 17 35995667 35998873 + MGP_LPJ_P0047235 H2-Q10 protein_coding protein_coding MGP_LPJ_T0048488.1 MGP_LPJ_G0023969.1 mouse_genomes_project 17 83991083 84041553 - MGP_LPJ_P0048488 Dhx57 protein_coding protein_coding MGP_LPJ_T0048489.1 MGP_LPJ_G0023969.1 mouse_genomes_project 17 83991083 84041553 - MGP_LPJ_P0048489 Dhx57 protein_coding protein_coding MGP_LPJ_T0006994.1 MGP_LPJ_G0005755.1 mouse_genomes_project 17 78008198 78053476 - Gm26749 lincRNA lincRNA MGP_LPJ_T0101987.1 MGP_LPJ_G0040024.1 mouse_genomes_project 17 38371031 38371752 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0048156.1 MGP_LPJ_G0023856.1 mouse_genomes_project 17 59421454 59422016 - MGP_LPJ_P0048156 Pspn protein_coding protein_coding MGP_LPJ_T0010240.1 MGP_LPJ_G0008358.1 mouse_genomes_project 17 74022246 74022344 - Mir1195 miRNA miRNA MGP_LPJ_T0047177.1 MGP_LPJ_G0023532.1 mouse_genomes_project 17 35600985 35604039 - MGP_LPJ_P0047177 Apom protein_coding protein_coding MGP_LPJ_T0010189.1 MGP_LPJ_G0008307.1 mouse_genomes_project 17 20007667 20007777 - Gm26384 miRNA miRNA MGP_LPJ_T0003797.1 MGP_LPJ_G0003415.1 mouse_genomes_project 17 73994101 73995482 + Gm20703 antisense antisense MGP_LPJ_T0045571.1 MGP_LPJ_G0023134.1 mouse_genomes_project 17 19664767 19690239 + MGP_LPJ_P0045571 Zfp160 protein_coding protein_coding MGP_LPJ_T0045532.1 MGP_LPJ_G0023101.1 mouse_genomes_project 17 16053919 16513811 + MGP_LPJ_P0045532 protein_coding protein_coding MGP_LPJ_T0006915.1 MGP_LPJ_G0005697.1 mouse_genomes_project 17 13201018 13207956 + A930024N18Rik lincRNA lincRNA MGP_LPJ_T0046917.1 MGP_LPJ_G0023477.1 mouse_genomes_project 17 34525044 34533196 + MGP_LPJ_P0046917 H2-Ab1 protein_coding protein_coding MGP_LPJ_T0046918.1 MGP_LPJ_G0023477.1 mouse_genomes_project 17 34530879 34531812 + H2-Ab1 protein_coding retained_intron MGP_LPJ_T0046919.1 MGP_LPJ_G0023477.1 mouse_genomes_project 17 34532047 34533172 + H2-Ab1 protein_coding retained_intron MGP_LPJ_T0006932.1 MGP_LPJ_G0005712.1 mouse_genomes_project 17 28195725 28196493 - Gm20109 lincRNA lincRNA MGP_LPJ_T0007006.1 MGP_LPJ_G0005764.1 mouse_genomes_project 17 91682165 91696771 + Gm28676 lincRNA lincRNA MGP_LPJ_T0010243.1 MGP_LPJ_G0008361.1 mouse_genomes_project 17 86029710 86029806 + Gm23400 miRNA miRNA MGP_LPJ_T0047061.1 MGP_LPJ_G0023506.1 mouse_genomes_project 17 35305597 35321752 + MGP_LPJ_P0047061 Zbtb12 protein_coding protein_coding MGP_LPJ_T0047064.1 MGP_LPJ_G0023506.1 mouse_genomes_project 17 35320865 35323156 + MGP_LPJ_P0047064 Zbtb12 protein_coding protein_coding MGP_LPJ_T0048035.1 MGP_LPJ_G0023804.1 mouse_genomes_project 17 57790961 57831823 + MGP_LPJ_P0048035 St6gal2 protein_coding protein_coding MGP_LPJ_T0048036.1 MGP_LPJ_G0023804.1 mouse_genomes_project 17 57790968 57847471 + MGP_LPJ_P0048036 St6gal2 protein_coding protein_coding MGP_LPJ_T0048037.1 MGP_LPJ_G0023804.1 mouse_genomes_project 17 57791129 57863043 + MGP_LPJ_P0048037 St6gal2 protein_coding protein_coding MGP_LPJ_T0048038.1 MGP_LPJ_G0023804.1 mouse_genomes_project 17 57791825 57831159 + St6gal2 protein_coding processed_transcript MGP_LPJ_T0045953.1 MGP_LPJ_G0023251.1 mouse_genomes_project 17 24576605 24583577 - MGP_LPJ_P0045953 Gnptg protein_coding protein_coding MGP_LPJ_T0045954.1 MGP_LPJ_G0023251.1 mouse_genomes_project 17 24577591 24583569 - MGP_LPJ_P0045954 Gnptg protein_coding protein_coding MGP_LPJ_T0045955.1 MGP_LPJ_G0023252.1 mouse_genomes_project 17 24583622 24586236 + MGP_LPJ_P0045955 Tsr3 protein_coding protein_coding MGP_LPJ_T0013265.1 MGP_LPJ_G0011356.1 mouse_genomes_project 17 79838985 79839432 - processed_pseudogene processed_pseudogene MGP_LPJ_T0045556.1 MGP_LPJ_G0023125.1 mouse_genomes_project 17 19276082 19277114 - MGP_LPJ_P0045556 Fpr-rs3 protein_coding protein_coding MGP_LPJ_T0045607.1 MGP_LPJ_G0023156.1 mouse_genomes_project 17 21353539 21374615 - MGP_LPJ_P0045607 Zfp944 protein_coding protein_coding MGP_LPJ_T0100488.1 MGP_LPJ_G0038751.1 mouse_genomes_project 17 87075260 87075395 + Gm24240 snoRNA snoRNA MGP_LPJ_T0101925.1 MGP_LPJ_G0039962.1 mouse_genomes_project 17 18234646 18235516 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0099211.1 MGP_LPJ_G0037474.1 mouse_genomes_project 17 25076626 25076733 - Gm22645 snRNA snRNA MGP_LPJ_T0047538.1 MGP_LPJ_G0023646.1 mouse_genomes_project 17 39185778 39186705 + MGP_LPJ_P0047538 Olfr134 protein_coding protein_coding MGP_LPJ_T0006995.1 MGP_LPJ_G0005756.1 mouse_genomes_project 17 82568221 82581214 + Gm26637 lincRNA lincRNA MGP_LPJ_T0045309.1 MGP_LPJ_G0023032.1 mouse_genomes_project 17 5294892 5373690 - MGP_LPJ_P0045309 Gm1604b protein_coding protein_coding MGP_LPJ_T0046873.1 MGP_LPJ_G0023466.1 mouse_genomes_project 17 34345415 34348310 + MGP_LPJ_P0046873 H2-Oa protein_coding protein_coding MGP_LPJ_T0046874.1 MGP_LPJ_G0023466.1 mouse_genomes_project 17 34345497 34348309 + H2-Oa protein_coding retained_intron MGP_LPJ_T0047521.1 MGP_LPJ_G0023632.1 mouse_genomes_project 17 38687642 38694327 + MGP_LPJ_P0047521 Olfr119 protein_coding protein_coding MGP_LPJ_T0047527.1 MGP_LPJ_G0023638.1 mouse_genomes_project 17 38886381 38887476 + MGP_LPJ_P0047527 Olfr127 protein_coding protein_coding MGP_LPJ_T0046149.1 MGP_LPJ_G0023297.1 mouse_genomes_project 17 25543004 25547428 + MGP_LPJ_P0046149 Mrpl28 protein_coding protein_coding MGP_LPJ_T0046150.1 MGP_LPJ_G0023297.1 mouse_genomes_project 17 25543202 25544415 + Mrpl28 protein_coding retained_intron MGP_LPJ_T0013240.1 MGP_LPJ_G0011331.1 mouse_genomes_project 17 42828633 42829634 + processed_pseudogene processed_pseudogene MGP_LPJ_T0047822.1 MGP_LPJ_G0023747.1 mouse_genomes_project 17 48690393 48709493 + MGP_LPJ_P0047822 Prph2 protein_coding protein_coding MGP_LPJ_T0047823.1 MGP_LPJ_G0023747.1 mouse_genomes_project 17 48690412 48704904 + Prph2 protein_coding retained_intron MGP_LPJ_T0046224.1 MGP_LPJ_G0023313.1 mouse_genomes_project 17 26295053 26297953 - MGP_LPJ_P0046224 Nkx2-5 protein_coding protein_coding MGP_LPJ_T0048601.1 MGP_LPJ_G0024016.1 mouse_genomes_project 17 91890587 91949419 + MGP_LPJ_P0048601 Msh2 protein_coding protein_coding MGP_LPJ_T0048602.1 MGP_LPJ_G0024016.1 mouse_genomes_project 17 91890797 91898607 + Msh2 protein_coding retained_intron MGP_LPJ_T0048603.1 MGP_LPJ_G0024016.1 mouse_genomes_project 17 91890818 91931160 + Msh2 protein_coding retained_intron MGP_LPJ_T0048604.1 MGP_LPJ_G0024016.1 mouse_genomes_project 17 91890866 91906606 + MGP_LPJ_P0048604 Msh2 protein_coding protein_coding MGP_LPJ_T0048605.1 MGP_LPJ_G0024016.1 mouse_genomes_project 17 91909918 91917554 + Msh2 protein_coding retained_intron MGP_LPJ_T0048606.1 MGP_LPJ_G0024016.1 mouse_genomes_project 17 91917391 91942948 + MGP_LPJ_P0048606 Msh2 protein_coding nonsense_mediated_decay MGP_LPJ_T0006959.1 MGP_LPJ_G0005734.1 mouse_genomes_project 17 36586752 36588614 + Gm20508 lincRNA lincRNA MGP_LPJ_T0046131.1 MGP_LPJ_G0023291.1 mouse_genomes_project 17 25355095 25366748 + MGP_LPJ_P0046131 D630044L22Rik protein_coding protein_coding MGP_LPJ_T0046358.1 MGP_LPJ_G0023345.1 mouse_genomes_project 17 27969918 27970974 + protein_coding retained_intron MGP_LPJ_T0046359.1 MGP_LPJ_G0023345.1 mouse_genomes_project 17 27969919 27974258 + MGP_LPJ_P0046359 protein_coding nonsense_mediated_decay MGP_LPJ_T0046360.1 MGP_LPJ_G0023345.1 mouse_genomes_project 17 27969945 27970731 + protein_coding retained_intron MGP_LPJ_T0046361.1 MGP_LPJ_G0023345.1 mouse_genomes_project 17 27969949 27972308 + MGP_LPJ_P0046361 protein_coding unknown_likely_coding MGP_LPJ_T0046362.1 MGP_LPJ_G0023345.1 mouse_genomes_project 17 27969982 27970858 + protein_coding retained_intron MGP_LPJ_T0046363.1 MGP_LPJ_G0023345.1 mouse_genomes_project 17 27970146 27972108 + protein_coding retained_intron MGP_LPJ_T0046364.1 MGP_LPJ_G0023345.1 mouse_genomes_project 17 27970613 27974253 + protein_coding retained_intron MGP_LPJ_T0100487.1 MGP_LPJ_G0038750.1 mouse_genomes_project 17 86025718 86025847 - Gm22386 snoRNA snoRNA MGP_LPJ_T0006937.1 MGP_LPJ_G0005716.1 mouse_genomes_project 17 28812488 28835633 - Trp53cor1 lincRNA lincRNA MGP_LPJ_T0045525.1 MGP_LPJ_G0023096.1 mouse_genomes_project 17 15887942 15894077 + Fpr2 protein_coding processed_transcript MGP_LPJ_T0045527.1 MGP_LPJ_G0023096.1 mouse_genomes_project 17 15888006 15893977 + MGP_LPJ_P0045527 Fpr2 protein_coding protein_coding MGP_LPJ_T0047435.1 MGP_LPJ_G0023592.1 mouse_genomes_project 17 37764856 37773300 - MGP_LPJ_P0047435 Trim40 protein_coding protein_coding MGP_LPJ_T0047436.1 MGP_LPJ_G0023592.1 mouse_genomes_project 17 37765103 37772773 - MGP_LPJ_P0047436 Trim40 protein_coding protein_coding MGP_LPJ_T0047437.1 MGP_LPJ_G0023592.1 mouse_genomes_project 17 37766196 37773378 - Trim40 protein_coding retained_intron MGP_LPJ_T0047438.1 MGP_LPJ_G0023592.1 mouse_genomes_project 17 37772504 37773367 - Trim40 protein_coding processed_transcript MGP_LPJ_T0048222.1 MGP_LPJ_G0023887.1 mouse_genomes_project 17 68495032 68499647 - MGP_LPJ_P0048222 Txndc2 protein_coding protein_coding MGP_LPJ_T0048332.1 MGP_LPJ_G0023914.1 mouse_genomes_project 17 74370513 74427338 + Lpin2 protein_coding retained_intron MGP_LPJ_T0048333.1 MGP_LPJ_G0023914.1 mouse_genomes_project 17 74371509 74424499 + MGP_LPJ_P0048333 Lpin2 protein_coding protein_coding MGP_LPJ_T0048334.1 MGP_LPJ_G0023914.1 mouse_genomes_project 17 74371682 74413580 + Lpin2 protein_coding retained_intron MGP_LPJ_T0048335.1 MGP_LPJ_G0023914.1 mouse_genomes_project 17 74395715 74423697 + MGP_LPJ_P0048335 Lpin2 protein_coding nonsense_mediated_decay MGP_LPJ_T0048336.1 MGP_LPJ_G0023914.1 mouse_genomes_project 17 74395837 74441991 + MGP_LPJ_P0048336 Lpin2 protein_coding protein_coding MGP_LPJ_T0048337.1 MGP_LPJ_G0023914.1 mouse_genomes_project 17 74423624 74430245 + Lpin2 protein_coding retained_intron MGP_LPJ_T0048338.1 MGP_LPJ_G0023914.1 mouse_genomes_project 17 74430822 74431561 + Lpin2 protein_coding retained_intron MGP_LPJ_T0048339.1 MGP_LPJ_G0023914.1 mouse_genomes_project 17 74430832 74438620 + MGP_LPJ_P0048339 Lpin2 protein_coding nonsense_mediated_decay MGP_LPJ_T0048340.1 MGP_LPJ_G0023914.1 mouse_genomes_project 17 74432768 74436993 + Lpin2 protein_coding retained_intron MGP_LPJ_T0048341.1 MGP_LPJ_G0023914.1 mouse_genomes_project 17 74432869 74435646 + Lpin2 protein_coding retained_intron MGP_LPJ_T0048342.1 MGP_LPJ_G0023914.1 mouse_genomes_project 17 74434562 74438074 + Lpin2 protein_coding retained_intron MGP_LPJ_T0048343.1 MGP_LPJ_G0023914.1 mouse_genomes_project 17 74438197 74439479 + Lpin2 protein_coding retained_intron MGP_LPJ_T0047744.1 MGP_LPJ_G0023719.1 mouse_genomes_project 17 47982000 48007247 - MGP_LPJ_P0047744 Tjap1 protein_coding protein_coding MGP_LPJ_T0047745.1 MGP_LPJ_G0023719.1 mouse_genomes_project 17 47982000 48007247 - MGP_LPJ_P0047745 Tjap1 protein_coding protein_coding MGP_LPJ_T0047746.1 MGP_LPJ_G0023719.1 mouse_genomes_project 17 47982000 48007247 - MGP_LPJ_P0047746 Tjap1 protein_coding protein_coding MGP_LPJ_T0047747.1 MGP_LPJ_G0023719.1 mouse_genomes_project 17 47984990 47988054 - MGP_LPJ_P0047747 Tjap1 protein_coding unknown_likely_coding MGP_LPJ_T0099214.1 MGP_LPJ_G0037477.1 mouse_genomes_project 17 30693685 30693789 - Gm24661 snRNA snRNA MGP_LPJ_T0047518.1 MGP_LPJ_G0023629.1 mouse_genomes_project 17 38638757 38640544 - MGP_LPJ_P0047518 Olfr117 protein_coding protein_coding MGP_LPJ_T0047371.1 MGP_LPJ_G0023571.1 mouse_genomes_project 17 36548420 36561404 - MGP_LPJ_P0047371 Abcf1 protein_coding protein_coding MGP_LPJ_T0047372.1 MGP_LPJ_G0023571.1 mouse_genomes_project 17 36548888 36550088 - Abcf1 protein_coding retained_intron MGP_LPJ_T0047373.1 MGP_LPJ_G0023571.1 mouse_genomes_project 17 36548902 36549790 - Abcf1 protein_coding retained_intron MGP_LPJ_T0047374.1 MGP_LPJ_G0023571.1 mouse_genomes_project 17 36549672 36551068 - Abcf1 protein_coding retained_intron MGP_LPJ_T0047375.1 MGP_LPJ_G0023571.1 mouse_genomes_project 17 36550271 36551216 - Abcf1 protein_coding retained_intron MGP_LPJ_T0047376.1 MGP_LPJ_G0023571.1 mouse_genomes_project 17 36553302 36555915 - Abcf1 protein_coding retained_intron MGP_LPJ_T0047377.1 MGP_LPJ_G0023571.1 mouse_genomes_project 17 36555237 36561002 - MGP_LPJ_P0047377 Abcf1 protein_coding protein_coding MGP_LPJ_T0047378.1 MGP_LPJ_G0023571.1 mouse_genomes_project 17 36555896 36561404 - MGP_LPJ_P0047378 Abcf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0045828.1 MGP_LPJ_G0023223.1 mouse_genomes_project 17 24015140 24024973 - MGP_LPJ_P0045828 Tbl3 protein_coding protein_coding MGP_LPJ_T0045837.1 MGP_LPJ_G0023223.1 mouse_genomes_project 17 24017654 24024944 - Tbl3 protein_coding retained_intron MGP_LPJ_T0045838.1 MGP_LPJ_G0023223.1 mouse_genomes_project 17 24018083 24019705 - MGP_LPJ_P0045838 Tbl3 protein_coding protein_coding MGP_LPJ_T0045839.1 MGP_LPJ_G0023223.1 mouse_genomes_project 17 24019215 24020538 - Tbl3 protein_coding retained_intron MGP_LPJ_T0045840.1 MGP_LPJ_G0023223.1 mouse_genomes_project 17 24021823 24023137 - Tbl3 protein_coding retained_intron MGP_LPJ_T0098198.1 MGP_LPJ_G0036479.1 mouse_genomes_project 17 49101253 49101326 + Gm26216 rRNA rRNA MGP_LPJ_T0047688.1 MGP_LPJ_G0023708.1 mouse_genomes_project 17 47412458 47413439 - MGP_LPJ_P0047688 1600014C23Rik protein_coding protein_coding MGP_LPJ_T0045549.1 MGP_LPJ_G0023118.1 mouse_genomes_project 17 18958824 19002444 + MGP_LPJ_P0045549 Vmn2r107 protein_coding protein_coding MGP_LPJ_T0045553.1 MGP_LPJ_G0023122.1 mouse_genomes_project 17 19179164 19205027 - MGP_LPJ_P0045553 Vmn2r109 protein_coding protein_coding MGP_LPJ_T0047933.1 MGP_LPJ_G0023774.1 mouse_genomes_project 17 50209691 50223284 + MGP_LPJ_P0047933 Trem1 protein_coding protein_coding MGP_LPJ_T0047934.1 MGP_LPJ_G0023774.1 mouse_genomes_project 17 50209694 50223834 + MGP_LPJ_P0047934 Trem1 protein_coding protein_coding MGP_LPJ_T0047634.1 MGP_LPJ_G0023698.1 mouse_genomes_project 17 47183908 47206397 + MGP_LPJ_P0047634 Tcte1 protein_coding protein_coding MGP_LPJ_T0045575.1 MGP_LPJ_G0023138.1 mouse_genomes_project 17 20037692 20038642 + MGP_LPJ_P0045575 Vmn1r237 protein_coding protein_coding MGP_LPJ_T0046773.1 MGP_LPJ_G0023449.1 mouse_genomes_project 17 34060358 34068349 + MGP_LPJ_P0046773 Cd320 protein_coding protein_coding MGP_LPJ_T0046774.1 MGP_LPJ_G0023449.1 mouse_genomes_project 17 34060370 34063585 + Cd320 protein_coding retained_intron MGP_LPJ_T0046775.1 MGP_LPJ_G0023449.1 mouse_genomes_project 17 34060693 34067378 + MGP_LPJ_P0046775 Cd320 protein_coding protein_coding MGP_LPJ_T0048273.1 MGP_LPJ_G0023900.1 mouse_genomes_project 17 70635684 70637443 - MGP_LPJ_P0048273 Lrrc30 protein_coding protein_coding MGP_LPJ_T0045508.1 MGP_LPJ_G0023092.1 mouse_genomes_project 17 15676258 15710432 + MGP_LPJ_P0045508 Vmn2r90 protein_coding protein_coding MGP_LPJ_T0045249.1 MGP_LPJ_G0023011.1 mouse_genomes_project 17 3234622 3332830 + MGP_LPJ_P0045249 Synj2 protein_coding protein_coding MGP_LPJ_T0045250.1 MGP_LPJ_G0023011.1 mouse_genomes_project 17 3234622 3338593 + MGP_LPJ_P0045250 Synj2 protein_coding protein_coding MGP_LPJ_T0045251.1 MGP_LPJ_G0023011.1 mouse_genomes_project 17 3234698 3339429 + MGP_LPJ_P0045251 Synj2 protein_coding nonsense_mediated_decay MGP_LPJ_T0045252.1 MGP_LPJ_G0023011.1 mouse_genomes_project 17 3234723 3338593 + MGP_LPJ_P0045252 Synj2 protein_coding protein_coding MGP_LPJ_T0045253.1 MGP_LPJ_G0023011.1 mouse_genomes_project 17 3273677 3326321 + MGP_LPJ_P0045253 Synj2 protein_coding protein_coding MGP_LPJ_T0045254.1 MGP_LPJ_G0023011.1 mouse_genomes_project 17 3273732 3344328 + MGP_LPJ_P0045254 Synj2 protein_coding protein_coding MGP_LPJ_T0045255.1 MGP_LPJ_G0023011.1 mouse_genomes_project 17 3273831 3338593 + MGP_LPJ_P0045255 Synj2 protein_coding protein_coding MGP_LPJ_T0045256.1 MGP_LPJ_G0023011.1 mouse_genomes_project 17 3286561 3339380 + MGP_LPJ_P0045256 Synj2 protein_coding protein_coding MGP_LPJ_T0045257.1 MGP_LPJ_G0023011.1 mouse_genomes_project 17 3288638 3344328 + MGP_LPJ_P0045257 Synj2 protein_coding protein_coding MGP_LPJ_T0045258.1 MGP_LPJ_G0023011.1 mouse_genomes_project 17 3294229 3338366 + MGP_LPJ_P0045258 Synj2 protein_coding protein_coding MGP_LPJ_T0045259.1 MGP_LPJ_G0023011.1 mouse_genomes_project 17 3295059 3319795 + MGP_LPJ_P0045259 Synj2 protein_coding protein_coding MGP_LPJ_T0045260.1 MGP_LPJ_G0023011.1 mouse_genomes_project 17 3305890 3332966 + MGP_LPJ_P0045260 Synj2 protein_coding protein_coding MGP_LPJ_T0045261.1 MGP_LPJ_G0023011.1 mouse_genomes_project 17 3305907 3338444 + MGP_LPJ_P0045261 Synj2 protein_coding protein_coding MGP_LPJ_T0045262.1 MGP_LPJ_G0023011.1 mouse_genomes_project 17 3305922 3308801 + Synj2 protein_coding processed_transcript MGP_LPJ_T0045263.1 MGP_LPJ_G0023011.1 mouse_genomes_project 17 3312914 3338411 + MGP_LPJ_P0045263 Synj2 protein_coding protein_coding MGP_LPJ_T0045264.1 MGP_LPJ_G0023011.1 mouse_genomes_project 17 3325106 3337500 + MGP_LPJ_P0045264 Synj2 protein_coding protein_coding MGP_LPJ_T0047613.1 MGP_LPJ_G0023693.1 mouse_genomes_project 17 46117608 46375999 - MGP_LPJ_P0047613 Runx2 protein_coding nonsense_mediated_decay MGP_LPJ_T0047614.1 MGP_LPJ_G0023693.1 mouse_genomes_project 17 46233832 46459924 - MGP_LPJ_P0047614 Runx2 protein_coding protein_coding MGP_LPJ_T0047615.1 MGP_LPJ_G0023693.1 mouse_genomes_project 17 46233832 46376471 - MGP_LPJ_P0047615 Runx2 protein_coding protein_coding MGP_LPJ_T0047616.1 MGP_LPJ_G0023693.1 mouse_genomes_project 17 46236052 46375533 - MGP_LPJ_P0047616 Runx2 protein_coding protein_coding MGP_LPJ_T0047617.1 MGP_LPJ_G0023693.1 mouse_genomes_project 17 46237321 46459708 - MGP_LPJ_P0047617 Runx2 protein_coding protein_coding MGP_LPJ_T0047618.1 MGP_LPJ_G0023693.1 mouse_genomes_project 17 46237609 46459353 - MGP_LPJ_P0047618 Runx2 protein_coding protein_coding MGP_LPJ_T0047619.1 MGP_LPJ_G0023693.1 mouse_genomes_project 17 46237609 46375457 - MGP_LPJ_P0047619 Runx2 protein_coding protein_coding MGP_LPJ_T0047620.1 MGP_LPJ_G0023693.1 mouse_genomes_project 17 46237695 46459754 - MGP_LPJ_P0047620 Runx2 protein_coding protein_coding MGP_LPJ_T0047621.1 MGP_LPJ_G0023693.1 mouse_genomes_project 17 46237791 46459924 - MGP_LPJ_P0047621 Runx2 protein_coding nonsense_mediated_decay MGP_LPJ_T0047622.1 MGP_LPJ_G0023693.1 mouse_genomes_project 17 46238105 46375192 - MGP_LPJ_P0047622 Runx2 protein_coding protein_coding MGP_LPJ_T0047623.1 MGP_LPJ_G0023693.1 mouse_genomes_project 17 46272804 46375457 - MGP_LPJ_P0047623 Runx2 protein_coding unknown_likely_coding MGP_LPJ_T0047624.1 MGP_LPJ_G0023693.1 mouse_genomes_project 17 46274834 46374519 - MGP_LPJ_P0047624 Runx2 protein_coding protein_coding MGP_LPJ_T0047625.1 MGP_LPJ_G0023693.1 mouse_genomes_project 17 46274930 46459391 - MGP_LPJ_P0047625 Runx2 protein_coding nonsense_mediated_decay MGP_LPJ_T0047630.1 MGP_LPJ_G0023693.1 mouse_genomes_project 17 46459032 46459754 - Runx2 protein_coding retained_intron MGP_LPJ_T0048158.1 MGP_LPJ_G0023858.1 mouse_genomes_project 17 59445808 59456406 - MGP_LPJ_P0048158 Khsrp protein_coding protein_coding MGP_LPJ_T0101968.1 MGP_LPJ_G0040005.1 mouse_genomes_project 17 37347929 37349629 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013201.1 MGP_LPJ_G0011292.1 mouse_genomes_project 17 9646355 9646891 + processed_pseudogene processed_pseudogene MGP_LPJ_T0048438.1 MGP_LPJ_G0023947.1 mouse_genomes_project 17 82175068 82298246 + MGP_LPJ_P0048438 Vit protein_coding protein_coding MGP_LPJ_T0046391.1 MGP_LPJ_G0023352.1 mouse_genomes_project 17 28255009 28262916 + MGP_LPJ_P0046391 Lhfpl5 protein_coding protein_coding MGP_LPJ_T0045918.1 MGP_LPJ_G0023243.1 mouse_genomes_project 17 24391474 24416690 - MGP_LPJ_P0045918 Tmem204 protein_coding protein_coding MGP_LPJ_T0045919.1 MGP_LPJ_G0023243.1 mouse_genomes_project 17 24391676 24413735 - MGP_LPJ_P0045919 Tmem204 protein_coding protein_coding MGP_LPJ_T0099213.1 MGP_LPJ_G0037476.1 mouse_genomes_project 17 30160710 30160783 + Gm25049 snRNA snRNA MGP_LPJ_T0047286.1 MGP_LPJ_G0023559.1 mouse_genomes_project 17 36248285 36267492 - MGP_LPJ_P0047286 Ddr1 protein_coding protein_coding MGP_LPJ_T0047287.1 MGP_LPJ_G0023559.1 mouse_genomes_project 17 36248285 36272878 - MGP_LPJ_P0047287 Ddr1 protein_coding protein_coding MGP_LPJ_T0047288.1 MGP_LPJ_G0023559.1 mouse_genomes_project 17 36248288 36272320 - MGP_LPJ_P0047288 Ddr1 protein_coding protein_coding MGP_LPJ_T0047289.1 MGP_LPJ_G0023559.1 mouse_genomes_project 17 36248288 36272418 - MGP_LPJ_P0047289 Ddr1 protein_coding protein_coding MGP_LPJ_T0047290.1 MGP_LPJ_G0023559.1 mouse_genomes_project 17 36248288 36268889 - MGP_LPJ_P0047290 Ddr1 protein_coding protein_coding MGP_LPJ_T0047291.1 MGP_LPJ_G0023559.1 mouse_genomes_project 17 36249149 36267434 - MGP_LPJ_P0047291 Ddr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0047292.1 MGP_LPJ_G0023559.1 mouse_genomes_project 17 36252021 36268809 - MGP_LPJ_P0047292 Ddr1 protein_coding protein_coding MGP_LPJ_T0047293.1 MGP_LPJ_G0023559.1 mouse_genomes_project 17 36256742 36272256 - MGP_LPJ_P0047293 Ddr1 protein_coding protein_coding MGP_LPJ_T0047294.1 MGP_LPJ_G0023559.1 mouse_genomes_project 17 36256770 36272900 - MGP_LPJ_P0047294 Ddr1 protein_coding protein_coding MGP_LPJ_T0047295.1 MGP_LPJ_G0023559.1 mouse_genomes_project 17 36256870 36264852 - MGP_LPJ_P0047295 Ddr1 protein_coding protein_coding MGP_LPJ_T0047296.1 MGP_LPJ_G0023559.1 mouse_genomes_project 17 36258008 36268891 - MGP_LPJ_P0047296 Ddr1 protein_coding protein_coding MGP_LPJ_T0047297.1 MGP_LPJ_G0023559.1 mouse_genomes_project 17 36259870 36269162 - MGP_LPJ_P0047297 Ddr1 protein_coding protein_coding MGP_LPJ_T0047175.1 MGP_LPJ_G0023531.1 mouse_genomes_project 17 35596985 35597523 + D17H6S53E protein_coding retained_intron MGP_LPJ_T0047176.1 MGP_LPJ_G0023531.1 mouse_genomes_project 17 35596998 35600844 + MGP_LPJ_P0047176 D17H6S53E protein_coding protein_coding MGP_LPJ_T0098197.1 MGP_LPJ_G0036478.1 mouse_genomes_project 17 46276149 46276268 - n-R5s27 rRNA rRNA MGP_LPJ_T0013253.1 MGP_LPJ_G0011344.1 mouse_genomes_project 17 56694364 56694505 + processed_pseudogene processed_pseudogene MGP_LPJ_T0045933.1 MGP_LPJ_G0023246.1 mouse_genomes_project 17 24469747 24497936 + MGP_LPJ_P0045933 Clcn7 protein_coding protein_coding MGP_LPJ_T0045934.1 MGP_LPJ_G0023246.1 mouse_genomes_project 17 24469821 24482401 + Clcn7 protein_coding retained_intron MGP_LPJ_T0045935.1 MGP_LPJ_G0023246.1 mouse_genomes_project 17 24472942 24497930 + MGP_LPJ_P0045935 Clcn7 protein_coding protein_coding MGP_LPJ_T0045936.1 MGP_LPJ_G0023246.1 mouse_genomes_project 17 24481666 24486450 + MGP_LPJ_P0045936 Clcn7 protein_coding protein_coding MGP_LPJ_T0045937.1 MGP_LPJ_G0023246.1 mouse_genomes_project 17 24482173 24488249 + Clcn7 protein_coding processed_transcript MGP_LPJ_T0045938.1 MGP_LPJ_G0023246.1 mouse_genomes_project 17 24487037 24493776 + MGP_LPJ_P0045938 Clcn7 protein_coding protein_coding MGP_LPJ_T0045939.1 MGP_LPJ_G0023246.1 mouse_genomes_project 17 24494521 24495574 + Clcn7 protein_coding retained_intron MGP_LPJ_T0045292.1 MGP_LPJ_G0023025.1 mouse_genomes_project 17 4407873 4437784 + MGP_LPJ_P0045292 Fndc1 protein_coding protein_coding MGP_LPJ_T0045293.1 MGP_LPJ_G0023025.1 mouse_genomes_project 17 4407873 4455418 + MGP_LPJ_P0045293 Fndc1 protein_coding protein_coding MGP_LPJ_T0045294.1 MGP_LPJ_G0023025.1 mouse_genomes_project 17 4408058 4505139 + MGP_LPJ_P0045294 Fndc1 protein_coding unknown_likely_coding MGP_LPJ_T0045295.1 MGP_LPJ_G0023025.1 mouse_genomes_project 17 4433648 4505785 + MGP_LPJ_P0045295 Fndc1 protein_coding protein_coding MGP_LPJ_T0045296.1 MGP_LPJ_G0023025.1 mouse_genomes_project 17 4473830 4480188 + Fndc1 protein_coding retained_intron MGP_LPJ_T0045297.1 MGP_LPJ_G0023025.1 mouse_genomes_project 17 4480470 4494843 + Fndc1 protein_coding processed_transcript MGP_LPJ_T0048499.1 MGP_LPJ_G0023976.1 mouse_genomes_project 17 84738618 84739323 - MGP_LPJ_P0048499 protein_coding protein_coding MGP_LPJ_T0101993.1 MGP_LPJ_G0040030.1 mouse_genomes_project 17 56138596 56139157 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0048493.1 MGP_LPJ_G0023972.1 mouse_genomes_project 17 84126512 84126836 - MGP_LPJ_P0048493 Gm10190 protein_coding protein_coding MGP_LPJ_T0048633.1 MGP_LPJ_G0024025.1 mouse_genomes_project 17 93034142 93084019 - MGP_LPJ_P0048633 Lhcgr protein_coding protein_coding MGP_LPJ_T0048167.1 MGP_LPJ_G0023861.1 mouse_genomes_project 17 59489804 59515446 + MGP_LPJ_P0048167 Crb3 protein_coding protein_coding MGP_LPJ_T0048168.1 MGP_LPJ_G0023861.1 mouse_genomes_project 17 59498287 59515451 + MGP_LPJ_P0048168 Crb3 protein_coding protein_coding MGP_LPJ_T0048169.1 MGP_LPJ_G0023861.1 mouse_genomes_project 17 59498339 59515450 + MGP_LPJ_P0048169 Crb3 protein_coding protein_coding MGP_LPJ_T0048170.1 MGP_LPJ_G0023861.1 mouse_genomes_project 17 59498355 59514961 + MGP_LPJ_P0048170 Crb3 protein_coding protein_coding MGP_LPJ_T0048171.1 MGP_LPJ_G0023861.1 mouse_genomes_project 17 59498564 59514698 + MGP_LPJ_P0048171 Crb3 protein_coding protein_coding MGP_LPJ_T0045555.1 MGP_LPJ_G0023124.1 mouse_genomes_project 17 19232472 19249673 - MGP_LPJ_P0045555 protein_coding protein_coding MGP_LPJ_T0047500.1 MGP_LPJ_G0023614.1 mouse_genomes_project 17 38218835 38219448 - MGP_LPJ_P0047500 Olfr99 protein_coding protein_coding MGP_LPJ_T0046292.1 MGP_LPJ_G0023332.1 mouse_genomes_project 17 27246462 27300513 + MGP_LPJ_P0046292 Pacsin1 protein_coding protein_coding MGP_LPJ_T0046293.1 MGP_LPJ_G0023332.1 mouse_genomes_project 17 27246541 27302956 + MGP_LPJ_P0046293 Pacsin1 protein_coding protein_coding MGP_LPJ_T0046294.1 MGP_LPJ_G0023332.1 mouse_genomes_project 17 27246596 27300529 + MGP_LPJ_P0046294 Pacsin1 protein_coding protein_coding MGP_LPJ_T0046295.1 MGP_LPJ_G0023332.1 mouse_genomes_project 17 27277911 27300513 + MGP_LPJ_P0046295 Pacsin1 protein_coding protein_coding MGP_LPJ_T0046296.1 MGP_LPJ_G0023332.1 mouse_genomes_project 17 27277941 27278805 + Pacsin1 protein_coding processed_transcript MGP_LPJ_T0013281.1 MGP_LPJ_G0011372.1 mouse_genomes_project 17 99217071 99217246 - processed_pseudogene processed_pseudogene MGP_LPJ_T0046317.1 MGP_LPJ_G0023339.1 mouse_genomes_project 17 27677422 27691565 - MGP_LPJ_P0046317 Tcp11 protein_coding protein_coding MGP_LPJ_T0046318.1 MGP_LPJ_G0023339.1 mouse_genomes_project 17 27677423 27691620 - MGP_LPJ_P0046318 Tcp11 protein_coding protein_coding MGP_LPJ_T0046319.1 MGP_LPJ_G0023339.1 mouse_genomes_project 17 27677426 27691548 - MGP_LPJ_P0046319 Tcp11 protein_coding protein_coding MGP_LPJ_T0046320.1 MGP_LPJ_G0023339.1 mouse_genomes_project 17 27677472 27679152 - Tcp11 protein_coding processed_transcript MGP_LPJ_T0046321.1 MGP_LPJ_G0023339.1 mouse_genomes_project 17 27680362 27691620 - MGP_LPJ_P0046321 Tcp11 protein_coding protein_coding MGP_LPJ_T0046322.1 MGP_LPJ_G0023339.1 mouse_genomes_project 17 27685430 27691582 - MGP_LPJ_P0046322 Tcp11 protein_coding protein_coding MGP_LPJ_T0046465.1 MGP_LPJ_G0023368.1 mouse_genomes_project 17 29035951 29075805 + MGP_LPJ_P0046465 BC004004 protein_coding protein_coding MGP_LPJ_T0046466.1 MGP_LPJ_G0023368.1 mouse_genomes_project 17 29036006 29074445 + MGP_LPJ_P0046466 BC004004 protein_coding protein_coding MGP_LPJ_T0046467.1 MGP_LPJ_G0023368.1 mouse_genomes_project 17 29036114 29052436 + BC004004 protein_coding retained_intron MGP_LPJ_T0046468.1 MGP_LPJ_G0023368.1 mouse_genomes_project 17 29041363 29074449 + MGP_LPJ_P0046468 BC004004 protein_coding protein_coding MGP_LPJ_T0046469.1 MGP_LPJ_G0023368.1 mouse_genomes_project 17 29071212 29074449 + BC004004 protein_coding processed_transcript MGP_LPJ_T0101498.1 MGP_LPJ_G0039636.1 mouse_genomes_project 17 11163014 11165033 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0046254.1 MGP_LPJ_G0023322.1 mouse_genomes_project 17 26550550 26621024 + MGP_LPJ_P0046254 Itpr3 protein_coding protein_coding MGP_LPJ_T0045492.1 MGP_LPJ_G0023087.1 mouse_genomes_project 17 13384517 13408373 - MGP_LPJ_P0045492 Prdm9 protein_coding protein_coding MGP_LPJ_T0045493.1 MGP_LPJ_G0023087.1 mouse_genomes_project 17 13385969 13400315 - Prdm9 protein_coding retained_intron MGP_LPJ_T0045494.1 MGP_LPJ_G0023087.1 mouse_genomes_project 17 13386082 13399847 - Prdm9 protein_coding retained_intron MGP_LPJ_T0045495.1 MGP_LPJ_G0023087.1 mouse_genomes_project 17 13397667 13409390 - MGP_LPJ_P0045495 Prdm9 protein_coding protein_coding MGP_LPJ_T0045496.1 MGP_LPJ_G0023087.1 mouse_genomes_project 17 13402960 13409404 - Prdm9 protein_coding retained_intron MGP_LPJ_T0045497.1 MGP_LPJ_G0023087.1 mouse_genomes_project 17 13407865 13409372 - Prdm9 protein_coding processed_transcript MGP_LPJ_T0047525.1 MGP_LPJ_G0023636.1 mouse_genomes_project 17 38810129 38811251 + MGP_LPJ_P0047525 Olfr124 protein_coding protein_coding MGP_LPJ_T0013268.1 MGP_LPJ_G0011359.1 mouse_genomes_project 17 82533664 82535683 - processed_pseudogene processed_pseudogene MGP_LPJ_T0045395.1 MGP_LPJ_G0023059.1 mouse_genomes_project 17 10375070 10376879 + MGP_LPJ_P0045395 Mrgprh protein_coding protein_coding MGP_LPJ_T0013255.1 MGP_LPJ_G0011346.1 mouse_genomes_project 17 64007437 64008479 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003743.1 MGP_LPJ_G0003375.1 mouse_genomes_project 17 27566668 27572378 - Gm15597 antisense antisense MGP_LPJ_T0003760.1 MGP_LPJ_G0003386.1 mouse_genomes_project 17 34144110 34144989 - Gm19412 antisense antisense MGP_LPJ_T0003761.1 MGP_LPJ_G0003386.1 mouse_genomes_project 17 34144405 34145121 - Gm19412 antisense antisense MGP_LPJ_T0003782.1 MGP_LPJ_G0003404.1 mouse_genomes_project 17 47251184 47253441 + Gm17080 antisense antisense MGP_LPJ_T0047395.1 MGP_LPJ_G0023577.1 mouse_genomes_project 17 36851666 36857118 - MGP_LPJ_P0047395 H2-T3 protein_coding protein_coding MGP_LPJ_T0047396.1 MGP_LPJ_G0023577.1 mouse_genomes_project 17 36851773 36857066 - H2-T3 protein_coding retained_intron MGP_LPJ_T0047397.1 MGP_LPJ_G0023577.1 mouse_genomes_project 17 36851782 36857118 - MGP_LPJ_P0047397 H2-T3 protein_coding nonsense_mediated_decay MGP_LPJ_T0100491.1 MGP_LPJ_G0038754.1 mouse_genomes_project 17 96219387 96219517 - Gm24244 snoRNA snoRNA MGP_LPJ_T0013266.1 MGP_LPJ_G0011357.1 mouse_genomes_project 17 81312851 81313154 - processed_pseudogene processed_pseudogene MGP_LPJ_T0048392.1 MGP_LPJ_G0023935.1 mouse_genomes_project 17 77687348 77707350 - MGP_LPJ_P0048392 Dpy30 protein_coding unknown_likely_coding MGP_LPJ_T0045432.1 MGP_LPJ_G0023072.1 mouse_genomes_project 17 11457450 11516884 + MGP_LPJ_P0045432 Mllt4 protein_coding protein_coding MGP_LPJ_T0045433.1 MGP_LPJ_G0023072.1 mouse_genomes_project 17 11457452 11617409 + MGP_LPJ_P0045433 Mllt4 protein_coding protein_coding MGP_LPJ_T0045434.1 MGP_LPJ_G0023072.1 mouse_genomes_project 17 11457452 11516884 + MGP_LPJ_P0045434 Mllt4 protein_coding protein_coding MGP_LPJ_T0045435.1 MGP_LPJ_G0023072.1 mouse_genomes_project 17 11457459 11617765 + MGP_LPJ_P0045435 Mllt4 protein_coding protein_coding MGP_LPJ_T0045436.1 MGP_LPJ_G0023072.1 mouse_genomes_project 17 11457510 11607938 + MGP_LPJ_P0045436 Mllt4 protein_coding protein_coding MGP_LPJ_T0045437.1 MGP_LPJ_G0023072.1 mouse_genomes_project 17 11457510 11615747 + MGP_LPJ_P0045437 Mllt4 protein_coding protein_coding MGP_LPJ_T0045438.1 MGP_LPJ_G0023072.1 mouse_genomes_project 17 11457516 11615789 + MGP_LPJ_P0045438 Mllt4 protein_coding protein_coding MGP_LPJ_T0045439.1 MGP_LPJ_G0023072.1 mouse_genomes_project 17 11458516 11560881 + Mllt4 protein_coding processed_transcript MGP_LPJ_T0045440.1 MGP_LPJ_G0023072.1 mouse_genomes_project 17 11557617 11562233 + Mllt4 protein_coding retained_intron MGP_LPJ_T0045441.1 MGP_LPJ_G0023072.1 mouse_genomes_project 17 11558388 11561920 + Mllt4 protein_coding processed_transcript MGP_LPJ_T0045442.1 MGP_LPJ_G0023072.1 mouse_genomes_project 17 11582587 11590157 + Mllt4 protein_coding processed_transcript MGP_LPJ_T0045443.1 MGP_LPJ_G0023072.1 mouse_genomes_project 17 11589637 11590859 + Mllt4 protein_coding retained_intron MGP_LPJ_T0045444.1 MGP_LPJ_G0023072.1 mouse_genomes_project 17 11596944 11615691 + MGP_LPJ_P0045444 Mllt4 protein_coding protein_coding MGP_LPJ_T0045445.1 MGP_LPJ_G0023072.1 mouse_genomes_project 17 11597130 11778024 + Mllt4 protein_coding retained_intron MGP_LPJ_T0045446.1 MGP_LPJ_G0023072.1 mouse_genomes_project 17 11610276 11615984 + Mllt4 protein_coding retained_intron MGP_LPJ_T0045447.1 MGP_LPJ_G0023072.1 mouse_genomes_project 17 11610438 11617410 + Mllt4 protein_coding retained_intron MGP_LPJ_T0006925.1 MGP_LPJ_G0005705.1 mouse_genomes_project 17 25188697 25367922 + lincRNA lincRNA MGP_LPJ_T0011828.1 MGP_LPJ_G0009936.1 mouse_genomes_project 17 35745372 35858521 + MGP_LPJ_P0011828 H2-Q5 polymorphic_pseudogene polymorphic_pseudogene MGP_LPJ_T0045503.1 MGP_LPJ_G0023089.1 mouse_genomes_project 17 13653497 13676446 - MGP_LPJ_P0045503 Rgmb protein_coding protein_coding MGP_LPJ_T0003800.1 MGP_LPJ_G0003418.1 mouse_genomes_project 17 89633727 89635382 - Gm28528 antisense antisense MGP_LPJ_T0045779.1 MGP_LPJ_G0023209.1 mouse_genomes_project 17 23771382 23776902 - MGP_LPJ_P0045779 Mlst8 protein_coding protein_coding MGP_LPJ_T0045780.1 MGP_LPJ_G0023209.1 mouse_genomes_project 17 23771382 23776902 - MGP_LPJ_P0045780 Mlst8 protein_coding protein_coding MGP_LPJ_T0047877.1 MGP_LPJ_G0023761.1 mouse_genomes_project 17 49488560 49550901 + MGP_LPJ_P0047877 Usp49 protein_coding protein_coding MGP_LPJ_T0047878.1 MGP_LPJ_G0023761.1 mouse_genomes_project 17 49510229 49536323 + MGP_LPJ_P0047878 Usp49 protein_coding protein_coding MGP_LPJ_T0047879.1 MGP_LPJ_G0023761.1 mouse_genomes_project 17 49536858 49545195 + MGP_LPJ_P0047879 Usp49 protein_coding protein_coding MGP_LPJ_T0047880.1 MGP_LPJ_G0023761.1 mouse_genomes_project 17 49537439 49544867 + MGP_LPJ_P0047880 Usp49 protein_coding nonsense_mediated_decay MGP_LPJ_T0046127.1 MGP_LPJ_G0023289.1 mouse_genomes_project 17 25346016 25348599 - MGP_LPJ_P0046127 Nhlrc4 protein_coding protein_coding MGP_LPJ_T0046128.1 MGP_LPJ_G0023289.1 mouse_genomes_project 17 25347935 25348628 - Nhlrc4 protein_coding processed_transcript MGP_LPJ_T0046129.1 MGP_LPJ_G0023289.1 mouse_genomes_project 17 25348023 25348498 - Nhlrc4 protein_coding processed_transcript MGP_LPJ_T0047207.1 MGP_LPJ_G0023536.1 mouse_genomes_project 17 35663251 35666573 - MGP_LPJ_P0047207 Lst1 protein_coding protein_coding MGP_LPJ_T0046016.1 MGP_LPJ_G0023266.1 mouse_genomes_project 17 25103421 25105644 + MGP_LPJ_P0046016 Gng13 protein_coding protein_coding MGP_LPJ_T0046017.1 MGP_LPJ_G0023266.1 mouse_genomes_project 17 25103776 25105325 + MGP_LPJ_P0046017 Gng13 protein_coding protein_coding MGP_LPJ_T0046624.1 MGP_LPJ_G0023410.1 mouse_genomes_project 17 32414559 32444002 - MGP_LPJ_P0046624 Wiz protein_coding nonsense_mediated_decay MGP_LPJ_T0046625.1 MGP_LPJ_G0023410.1 mouse_genomes_project 17 32414560 32444699 - MGP_LPJ_P0046625 Wiz protein_coding unknown_likely_coding MGP_LPJ_T0046626.1 MGP_LPJ_G0023410.1 mouse_genomes_project 17 32414561 32444243 - MGP_LPJ_P0046626 Wiz protein_coding protein_coding MGP_LPJ_T0046627.1 MGP_LPJ_G0023410.1 mouse_genomes_project 17 32414565 32444749 - MGP_LPJ_P0046627 Wiz protein_coding nonsense_mediated_decay MGP_LPJ_T0046628.1 MGP_LPJ_G0023410.1 mouse_genomes_project 17 32415153 32423468 - MGP_LPJ_P0046628 Wiz protein_coding protein_coding MGP_LPJ_T0046629.1 MGP_LPJ_G0023410.1 mouse_genomes_project 17 32415528 32443117 - MGP_LPJ_P0046629 Wiz protein_coding protein_coding MGP_LPJ_T0046630.1 MGP_LPJ_G0023410.1 mouse_genomes_project 17 32422179 32424968 - Wiz protein_coding processed_transcript MGP_LPJ_T0046631.1 MGP_LPJ_G0023410.1 mouse_genomes_project 17 32422318 32431833 - Wiz protein_coding retained_intron MGP_LPJ_T0046632.1 MGP_LPJ_G0023410.1 mouse_genomes_project 17 32422413 32443944 - MGP_LPJ_P0046632 Wiz protein_coding protein_coding MGP_LPJ_T0046633.1 MGP_LPJ_G0023410.1 mouse_genomes_project 17 32429445 32444084 - Wiz protein_coding retained_intron MGP_LPJ_T0046634.1 MGP_LPJ_G0023410.1 mouse_genomes_project 17 32430485 32444308 - MGP_LPJ_P0046634 Wiz protein_coding nonsense_mediated_decay MGP_LPJ_T0046635.1 MGP_LPJ_G0023410.1 mouse_genomes_project 17 32431719 32444734 - MGP_LPJ_P0046635 Wiz protein_coding nonsense_mediated_decay MGP_LPJ_T0046636.1 MGP_LPJ_G0023410.1 mouse_genomes_project 17 32431833 32444756 - Wiz protein_coding retained_intron MGP_LPJ_T0046637.1 MGP_LPJ_G0023410.1 mouse_genomes_project 17 32442930 32444474 - MGP_LPJ_P0046637 Wiz protein_coding protein_coding MGP_LPJ_T0048456.1 MGP_LPJ_G0023955.1 mouse_genomes_project 17 82612968 82632517 - MGP_LPJ_P0048456 Cebpz protein_coding protein_coding MGP_LPJ_T0100467.1 MGP_LPJ_G0038730.1 mouse_genomes_project 17 24043273 24043407 + Snora64 snoRNA snoRNA MGP_LPJ_T0045606.1 MGP_LPJ_G0023155.1 mouse_genomes_project 17 20903790 20904582 - MGP_LPJ_P0045606 Gm9772 protein_coding protein_coding MGP_LPJ_T0003744.1 MGP_LPJ_G0003376.1 mouse_genomes_project 17 27595097 27618970 - Gm15598 antisense antisense MGP_LPJ_T0101977.1 MGP_LPJ_G0040014.1 mouse_genomes_project 17 37856771 37858967 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0045978.1 MGP_LPJ_G0023255.1 mouse_genomes_project 17 24648919 24650687 + MGP_LPJ_P0045978 Prss34 protein_coding protein_coding MGP_LPJ_T0101931.1 MGP_LPJ_G0039968.1 mouse_genomes_project 17 19062035 19062887 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0047501.1 MGP_LPJ_G0023615.1 mouse_genomes_project 17 38239070 38240097 - MGP_LPJ_P0047501 protein_coding protein_coding MGP_LPJ_T0047626.1 MGP_LPJ_G0023694.1 mouse_genomes_project 17 46420852 46765509 + MGP_LPJ_P0047626 Supt3 protein_coding protein_coding MGP_LPJ_T0047627.1 MGP_LPJ_G0023694.1 mouse_genomes_project 17 46421025 46574331 + Supt3 protein_coding processed_transcript MGP_LPJ_T0047628.1 MGP_LPJ_G0023694.1 mouse_genomes_project 17 46421096 46765505 + MGP_LPJ_P0047628 Supt3 protein_coding protein_coding MGP_LPJ_T0047629.1 MGP_LPJ_G0023694.1 mouse_genomes_project 17 46430691 46765498 + MGP_LPJ_P0047629 Supt3 protein_coding protein_coding MGP_LPJ_T0045464.1 MGP_LPJ_G0023080.1 mouse_genomes_project 17 12766764 12781674 - MGP_LPJ_P0045464 protein_coding protein_coding MGP_LPJ_T0045465.1 MGP_LPJ_G0023080.1 mouse_genomes_project 17 12766764 12781674 - MGP_LPJ_P0045465 protein_coding protein_coding MGP_LPJ_T0047257.1 MGP_LPJ_G0023554.1 mouse_genomes_project 17 36162957 36216212 + MGP_LPJ_P0047257 Sfta2 protein_coding protein_coding MGP_LPJ_T0047258.1 MGP_LPJ_G0023554.1 mouse_genomes_project 17 36162986 36216210 + Sfta2 protein_coding processed_transcript MGP_LPJ_T0047261.1 MGP_LPJ_G0023554.1 mouse_genomes_project 17 36215352 36216216 + MGP_LPJ_P0047261 Sfta2 protein_coding protein_coding MGP_LPJ_T0098200.1 MGP_LPJ_G0036481.1 mouse_genomes_project 17 65889168 65889279 - Gm25348 rRNA rRNA MGP_LPJ_T0045781.1 MGP_LPJ_G0023210.1 mouse_genomes_project 17 23771716 23773302 + MGP_LPJ_P0045781 Bricd5 protein_coding protein_coding MGP_LPJ_T0045782.1 MGP_LPJ_G0023210.1 mouse_genomes_project 17 23771799 23773220 + MGP_LPJ_P0045782 Bricd5 protein_coding protein_coding MGP_LPJ_T0045540.1 MGP_LPJ_G0023109.1 mouse_genomes_project 17 17935537 17963924 + MGP_LPJ_P0045540 Vmn2r100 protein_coding protein_coding MGP_LPJ_T0047850.1 MGP_LPJ_G0023757.1 mouse_genomes_project 17 49354564 49454316 + MGP_LPJ_P0047850 Ccnd3 protein_coding protein_coding MGP_LPJ_T0047851.1 MGP_LPJ_G0023757.1 mouse_genomes_project 17 49354564 49452705 + MGP_LPJ_P0047851 Ccnd3 protein_coding protein_coding MGP_LPJ_T0047852.1 MGP_LPJ_G0023757.1 mouse_genomes_project 17 49354592 49452100 + MGP_LPJ_P0047852 Ccnd3 protein_coding protein_coding MGP_LPJ_T0047853.1 MGP_LPJ_G0023757.1 mouse_genomes_project 17 49354632 49454316 + MGP_LPJ_P0047853 Ccnd3 protein_coding protein_coding MGP_LPJ_T0047854.1 MGP_LPJ_G0023757.1 mouse_genomes_project 17 49354641 49454324 + MGP_LPJ_P0047854 Ccnd3 protein_coding protein_coding MGP_LPJ_T0047855.1 MGP_LPJ_G0023757.1 mouse_genomes_project 17 49354662 49454322 + MGP_LPJ_P0047855 Ccnd3 protein_coding protein_coding MGP_LPJ_T0047856.1 MGP_LPJ_G0023757.1 mouse_genomes_project 17 49354669 49453260 + MGP_LPJ_P0047856 Ccnd3 protein_coding protein_coding MGP_LPJ_T0047857.1 MGP_LPJ_G0023757.1 mouse_genomes_project 17 49354675 49432198 + Ccnd3 protein_coding retained_intron MGP_LPJ_T0047858.1 MGP_LPJ_G0023757.1 mouse_genomes_project 17 49354732 49432598 + Ccnd3 protein_coding retained_intron MGP_LPJ_T0047859.1 MGP_LPJ_G0023757.1 mouse_genomes_project 17 49354744 49448441 + MGP_LPJ_P0047859 Ccnd3 protein_coding protein_coding MGP_LPJ_T0047860.1 MGP_LPJ_G0023757.1 mouse_genomes_project 17 49354753 49432370 + Ccnd3 protein_coding retained_intron MGP_LPJ_T0047861.1 MGP_LPJ_G0023757.1 mouse_genomes_project 17 49354754 49357423 + Ccnd3 protein_coding retained_intron MGP_LPJ_T0047862.1 MGP_LPJ_G0023757.1 mouse_genomes_project 17 49354754 49453282 + MGP_LPJ_P0047862 Ccnd3 protein_coding protein_coding MGP_LPJ_T0047863.1 MGP_LPJ_G0023757.1 mouse_genomes_project 17 49448092 49452808 + Ccnd3 protein_coding retained_intron MGP_LPJ_T0047864.1 MGP_LPJ_G0023757.1 mouse_genomes_project 17 49448126 49454322 + MGP_LPJ_P0047864 Ccnd3 protein_coding protein_coding MGP_LPJ_T0047865.1 MGP_LPJ_G0023757.1 mouse_genomes_project 17 49448185 49452214 + MGP_LPJ_P0047865 Ccnd3 protein_coding protein_coding MGP_LPJ_T0047866.1 MGP_LPJ_G0023757.1 mouse_genomes_project 17 49450702 49453727 + MGP_LPJ_P0047866 Ccnd3 protein_coding protein_coding MGP_LPJ_T0047867.1 MGP_LPJ_G0023757.1 mouse_genomes_project 17 49450958 49453345 + MGP_LPJ_P0047867 Ccnd3 protein_coding protein_coding MGP_LPJ_T0047868.1 MGP_LPJ_G0023757.1 mouse_genomes_project 17 49451798 49452740 + MGP_LPJ_P0047868 Ccnd3 protein_coding protein_coding MGP_LPJ_T0045824.1 MGP_LPJ_G0023220.1 mouse_genomes_project 17 24001354 24007720 - MGP_LPJ_P0045824 Syngr3 protein_coding protein_coding MGP_LPJ_T0045825.1 MGP_LPJ_G0023220.1 mouse_genomes_project 17 24002897 24004195 - Syngr3 protein_coding processed_transcript MGP_LPJ_T0047804.1 MGP_LPJ_G0023737.1 mouse_genomes_project 17 48441994 48468648 - MGP_LPJ_P0047804 Ppp2r5d protein_coding protein_coding MGP_LPJ_T0046369.1 MGP_LPJ_G0023347.1 mouse_genomes_project 17 28001551 28005103 - Tulp1 protein_coding retained_intron MGP_LPJ_T0046370.1 MGP_LPJ_G0023347.1 mouse_genomes_project 17 28001551 28017561 - MGP_LPJ_P0046370 Tulp1 protein_coding protein_coding MGP_LPJ_T0046371.1 MGP_LPJ_G0023347.1 mouse_genomes_project 17 28001552 28011147 - MGP_LPJ_P0046371 Tulp1 protein_coding protein_coding MGP_LPJ_T0046372.1 MGP_LPJ_G0023347.1 mouse_genomes_project 17 28001890 28011115 - MGP_LPJ_P0046372 Tulp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0046373.1 MGP_LPJ_G0023347.1 mouse_genomes_project 17 28002566 28015333 - Tulp1 protein_coding retained_intron MGP_LPJ_T0046374.1 MGP_LPJ_G0023347.1 mouse_genomes_project 17 28002574 28006413 - Tulp1 protein_coding retained_intron MGP_LPJ_T0046375.1 MGP_LPJ_G0023347.1 mouse_genomes_project 17 28003098 28011628 - MGP_LPJ_P0046375 Tulp1 protein_coding protein_coding MGP_LPJ_T0046376.1 MGP_LPJ_G0023347.1 mouse_genomes_project 17 28005853 28017595 - MGP_LPJ_P0046376 Tulp1 protein_coding protein_coding MGP_LPJ_T0046377.1 MGP_LPJ_G0023347.1 mouse_genomes_project 17 28010902 28014845 - Tulp1 protein_coding retained_intron MGP_LPJ_T0046378.1 MGP_LPJ_G0023347.1 mouse_genomes_project 17 28014050 28015370 - Tulp1 protein_coding retained_intron MGP_LPJ_T0046379.1 MGP_LPJ_G0023347.1 mouse_genomes_project 17 28015107 28017559 - Tulp1 protein_coding retained_intron MGP_LPJ_T0046380.1 MGP_LPJ_G0023347.1 mouse_genomes_project 17 28016098 28017552 - Tulp1 protein_coding retained_intron MGP_LPJ_T0045421.1 MGP_LPJ_G0023068.1 mouse_genomes_project 17 11162928 11180995 + MGP_LPJ_P0045421 protein_coding protein_coding MGP_LPJ_T0047506.1 MGP_LPJ_G0023619.1 mouse_genomes_project 17 38408416 38409454 + MGP_LPJ_P0047506 protein_coding protein_coding MGP_LPJ_T0045423.1 MGP_LPJ_G0023070.1 mouse_genomes_project 17 11162928 11181152 + MGP_LPJ_P0045423 protein_coding protein_coding MGP_LPJ_T0047819.1 MGP_LPJ_G0023744.1 mouse_genomes_project 17 48566394 48604357 - MGP_LPJ_P0047819 Gltscr1l protein_coding protein_coding MGP_LPJ_T0048283.1 MGP_LPJ_G0023904.1 mouse_genomes_project 17 71888787 71894804 + MGP_LPJ_P0048283 Tmem200c protein_coding protein_coding MGP_LPJ_T0003792.1 MGP_LPJ_G0003412.1 mouse_genomes_project 17 61485161 61501043 + Nudt12os antisense antisense MGP_LPJ_T0003793.1 MGP_LPJ_G0003412.1 mouse_genomes_project 17 61485185 61513864 + Nudt12os antisense antisense MGP_LPJ_T0003794.1 MGP_LPJ_G0003412.1 mouse_genomes_project 17 61506207 61513612 + Nudt12os antisense antisense MGP_LPJ_T0046744.1 MGP_LPJ_G0023444.1 mouse_genomes_project 17 33950949 33970153 - MGP_LPJ_P0046744 Rab11b protein_coding protein_coding MGP_LPJ_T0046745.1 MGP_LPJ_G0023444.1 mouse_genomes_project 17 33951677 33969885 - MGP_LPJ_P0046745 Rab11b protein_coding unknown_likely_coding MGP_LPJ_T0046746.1 MGP_LPJ_G0023444.1 mouse_genomes_project 17 33958708 33970107 - Rab11b protein_coding processed_transcript MGP_LPJ_T0099239.1 MGP_LPJ_G0037502.1 mouse_genomes_project 17 88314301 88314408 + Gm24722 snRNA snRNA MGP_LPJ_T0048083.1 MGP_LPJ_G0023829.1 mouse_genomes_project 17 58616466 58620705 + MGP_LPJ_P0048083 protein_coding protein_coding MGP_LPJ_T0101978.1 MGP_LPJ_G0040015.1 mouse_genomes_project 17 38077498 38078345 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0045311.1 MGP_LPJ_G0023034.1 mouse_genomes_project 17 5390959 5428359 - MGP_LPJ_P0045311 protein_coding protein_coding MGP_LPJ_T0045312.1 MGP_LPJ_G0023034.1 mouse_genomes_project 17 5405386 5428406 - MGP_LPJ_P0045312 protein_coding protein_coding MGP_LPJ_T0046747.1 MGP_LPJ_G0023445.1 mouse_genomes_project 17 33984501 33992327 - MGP_LPJ_P0046747 Angptl4 protein_coding protein_coding MGP_LPJ_T0046748.1 MGP_LPJ_G0023445.1 mouse_genomes_project 17 33985659 33992295 - MGP_LPJ_P0046748 Angptl4 protein_coding nonsense_mediated_decay MGP_LPJ_T0046749.1 MGP_LPJ_G0023445.1 mouse_genomes_project 17 33987722 33989217 - Angptl4 protein_coding retained_intron MGP_LPJ_T0046750.1 MGP_LPJ_G0023445.1 mouse_genomes_project 17 33987763 33989895 - Angptl4 protein_coding processed_transcript MGP_LPJ_T0046717.1 MGP_LPJ_G0023440.1 mouse_genomes_project 17 33832633 33835336 + MGP_LPJ_P0046717 Zfp414 protein_coding protein_coding MGP_LPJ_T0046718.1 MGP_LPJ_G0023440.1 mouse_genomes_project 17 33832633 33835273 + MGP_LPJ_P0046718 Zfp414 protein_coding protein_coding MGP_LPJ_T0046719.1 MGP_LPJ_G0023440.1 mouse_genomes_project 17 33832644 33834514 + Zfp414 protein_coding retained_intron MGP_LPJ_T0046720.1 MGP_LPJ_G0023440.1 mouse_genomes_project 17 33832664 33835021 + MGP_LPJ_P0046720 Zfp414 protein_coding protein_coding MGP_LPJ_T0046721.1 MGP_LPJ_G0023440.1 mouse_genomes_project 17 33832757 33835277 + MGP_LPJ_P0046721 Zfp414 protein_coding protein_coding MGP_LPJ_T0046722.1 MGP_LPJ_G0023440.1 mouse_genomes_project 17 33833757 33834328 + Zfp414 protein_coding retained_intron MGP_LPJ_T0046723.1 MGP_LPJ_G0023440.1 mouse_genomes_project 17 33834645 33835247 + Zfp414 protein_coding retained_intron MGP_LPJ_T0047751.1 MGP_LPJ_G0023721.1 mouse_genomes_project 17 48029887 48054716 - MGP_LPJ_P0047751 Abcc10 protein_coding protein_coding MGP_LPJ_T0047752.1 MGP_LPJ_G0023721.1 mouse_genomes_project 17 48029896 48054669 - MGP_LPJ_P0047752 Abcc10 protein_coding nonsense_mediated_decay MGP_LPJ_T0047753.1 MGP_LPJ_G0023721.1 mouse_genomes_project 17 48029899 48054672 - MGP_LPJ_P0047753 Abcc10 protein_coding protein_coding MGP_LPJ_T0047754.1 MGP_LPJ_G0023721.1 mouse_genomes_project 17 48030087 48052476 - MGP_LPJ_P0047754 Abcc10 protein_coding protein_coding MGP_LPJ_T0047755.1 MGP_LPJ_G0023721.1 mouse_genomes_project 17 48042179 48050343 - MGP_LPJ_P0047755 Abcc10 protein_coding protein_coding MGP_LPJ_T0047756.1 MGP_LPJ_G0023721.1 mouse_genomes_project 17 48049568 48054690 - Abcc10 protein_coding retained_intron MGP_LPJ_T0047757.1 MGP_LPJ_G0023721.1 mouse_genomes_project 17 48051267 48055045 - Abcc10 protein_coding processed_transcript MGP_LPJ_T0101967.1 MGP_LPJ_G0040004.1 mouse_genomes_project 17 37335080 37336298 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0011456.1 MGP_LPJ_G0009574.1 mouse_genomes_project 17 89631102 89631374 + Gm27275 misc_RNA misc_RNA MGP_LPJ_T0046542.1 MGP_LPJ_G0023392.1 mouse_genomes_project 17 31168413 31206061 + MGP_LPJ_P0046542 Ubash3a protein_coding protein_coding MGP_LPJ_T0046543.1 MGP_LPJ_G0023392.1 mouse_genomes_project 17 31168620 31178518 + MGP_LPJ_P0046543 Ubash3a protein_coding nonsense_mediated_decay MGP_LPJ_T0046544.1 MGP_LPJ_G0023392.1 mouse_genomes_project 17 31168629 31176235 + MGP_LPJ_P0046544 Ubash3a protein_coding protein_coding MGP_LPJ_T0046545.1 MGP_LPJ_G0023392.1 mouse_genomes_project 17 31174410 31206061 + Ubash3a protein_coding processed_transcript MGP_LPJ_T0046546.1 MGP_LPJ_G0023392.1 mouse_genomes_project 17 31174594 31180269 + Ubash3a protein_coding processed_transcript MGP_LPJ_T0047580.1 MGP_LPJ_G0023678.1 mouse_genomes_project 17 44202885 44226401 - MGP_LPJ_P0047580 Adgrf2 protein_coding unknown_likely_coding MGP_LPJ_T0047581.1 MGP_LPJ_G0023678.1 mouse_genomes_project 17 44215871 44251198 - MGP_LPJ_P0047581 Adgrf2 protein_coding protein_coding MGP_LPJ_T0045881.1 MGP_LPJ_G0023238.1 mouse_genomes_project 17 24225709 24226882 + MGP_LPJ_P0045881 Mrps34 protein_coding protein_coding MGP_LPJ_T0045882.1 MGP_LPJ_G0023238.1 mouse_genomes_project 17 24225716 24228105 + MGP_LPJ_P0045882 Mrps34 protein_coding nonsense_mediated_decay MGP_LPJ_T0045883.1 MGP_LPJ_G0023238.1 mouse_genomes_project 17 24225728 24226709 + Mrps34 protein_coding retained_intron MGP_LPJ_T0046727.1 MGP_LPJ_G0023442.1 mouse_genomes_project 17 33849788 33891320 - MGP_LPJ_P0046727 Hnrnpm protein_coding protein_coding MGP_LPJ_T0046728.1 MGP_LPJ_G0023442.1 mouse_genomes_project 17 33849790 33889852 - MGP_LPJ_P0046728 Hnrnpm protein_coding protein_coding MGP_LPJ_T0046729.1 MGP_LPJ_G0023442.1 mouse_genomes_project 17 33849791 33889848 - MGP_LPJ_P0046729 Hnrnpm protein_coding protein_coding MGP_LPJ_T0046730.1 MGP_LPJ_G0023442.1 mouse_genomes_project 17 33849794 33863831 - MGP_LPJ_P0046730 Hnrnpm protein_coding protein_coding MGP_LPJ_T0046731.1 MGP_LPJ_G0023442.1 mouse_genomes_project 17 33849794 33889848 - MGP_LPJ_P0046731 Hnrnpm protein_coding protein_coding MGP_LPJ_T0046732.1 MGP_LPJ_G0023442.1 mouse_genomes_project 17 33853815 33871030 - MGP_LPJ_P0046732 Hnrnpm protein_coding protein_coding MGP_LPJ_T0046733.1 MGP_LPJ_G0023442.1 mouse_genomes_project 17 33873097 33889845 - Hnrnpm protein_coding retained_intron MGP_LPJ_T0046734.1 MGP_LPJ_G0023442.1 mouse_genomes_project 17 33881399 33889861 - Hnrnpm protein_coding retained_intron MGP_LPJ_T0045616.1 MGP_LPJ_G0023159.1 mouse_genomes_project 17 21798998 21799169 + MGP_LPJ_P0045616 Gm9805 protein_coding protein_coding MGP_LPJ_T0045301.1 MGP_LPJ_G0023029.1 mouse_genomes_project 17 4985078 5019088 - MGP_LPJ_P0045301 protein_coding protein_coding MGP_LPJ_T0045303.1 MGP_LPJ_G0023029.1 mouse_genomes_project 17 4985540 5017175 - MGP_LPJ_P0045303 protein_coding protein_coding MGP_LPJ_T0045305.1 MGP_LPJ_G0023029.1 mouse_genomes_project 17 4985550 5019067 - MGP_LPJ_P0045305 protein_coding protein_coding MGP_LPJ_T0045307.1 MGP_LPJ_G0023029.1 mouse_genomes_project 17 5003857 5017040 - MGP_LPJ_P0045307 protein_coding protein_coding MGP_LPJ_T0100470.1 MGP_LPJ_G0038733.1 mouse_genomes_project 17 35404033 35404099 - Snord52 snoRNA snoRNA MGP_LPJ_T0045749.1 MGP_LPJ_G0023200.1 mouse_genomes_project 17 23487828 23493575 - MGP_LPJ_P0045749 1600002H07Rik protein_coding protein_coding MGP_LPJ_T0045750.1 MGP_LPJ_G0023200.1 mouse_genomes_project 17 23488013 23493636 - 1600002H07Rik protein_coding retained_intron MGP_LPJ_T0045751.1 MGP_LPJ_G0023200.1 mouse_genomes_project 17 23488320 23493477 - MGP_LPJ_P0045751 1600002H07Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0045752.1 MGP_LPJ_G0023200.1 mouse_genomes_project 17 23491963 23493516 - 1600002H07Rik protein_coding retained_intron MGP_LPJ_T0045753.1 MGP_LPJ_G0023200.1 mouse_genomes_project 17 23492565 23493538 - 1600002H07Rik protein_coding retained_intron MGP_LPJ_T0013251.1 MGP_LPJ_G0011342.1 mouse_genomes_project 17 56204266 56205393 - processed_pseudogene processed_pseudogene MGP_LPJ_T0046388.1 MGP_LPJ_G0023350.1 mouse_genomes_project 17 28226829 28231230 + MGP_LPJ_P0046388 Clpsl2 protein_coding protein_coding MGP_LPJ_T0048609.1 MGP_LPJ_G0024019.1 mouse_genomes_project 17 92224680 92240279 + MGP_LPJ_P0048609 Msh6 protein_coding protein_coding MGP_LPJ_T0003762.1 MGP_LPJ_G0003387.1 mouse_genomes_project 17 34337419 34348385 - BC051537 antisense antisense MGP_LPJ_T0101919.1 MGP_LPJ_G0039956.1 mouse_genomes_project 17 16054627 18743849 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0045623.1 MGP_LPJ_G0023162.1 mouse_genomes_project 17 22274140 22296171 - Zfp40 protein_coding processed_transcript MGP_LPJ_T0045624.1 MGP_LPJ_G0023162.1 mouse_genomes_project 17 22275469 22294340 - MGP_LPJ_P0045624 Zfp40 protein_coding protein_coding MGP_LPJ_T0045625.1 MGP_LPJ_G0023162.1 mouse_genomes_project 17 22277533 22296212 - Zfp40 protein_coding processed_transcript MGP_LPJ_T0045626.1 MGP_LPJ_G0023162.1 mouse_genomes_project 17 22294306 22296213 - MGP_LPJ_P0045626 Zfp40 protein_coding protein_coding MGP_LPJ_T0047100.1 MGP_LPJ_G0023515.1 mouse_genomes_project 17 35461361 35476654 + MGP_LPJ_P0047100 Vars protein_coding protein_coding MGP_LPJ_T0047101.1 MGP_LPJ_G0023515.1 mouse_genomes_project 17 35461425 35476362 + MGP_LPJ_P0047101 Vars protein_coding protein_coding MGP_LPJ_T0047102.1 MGP_LPJ_G0023515.1 mouse_genomes_project 17 35461691 35465177 + MGP_LPJ_P0047102 Vars protein_coding protein_coding MGP_LPJ_T0047103.1 MGP_LPJ_G0023515.1 mouse_genomes_project 17 35463031 35465227 + MGP_LPJ_P0047103 Vars protein_coding protein_coding MGP_LPJ_T0047104.1 MGP_LPJ_G0023515.1 mouse_genomes_project 17 35463088 35476654 + Vars protein_coding retained_intron MGP_LPJ_T0047105.1 MGP_LPJ_G0023515.1 mouse_genomes_project 17 35464668 35465436 + Vars protein_coding retained_intron MGP_LPJ_T0047106.1 MGP_LPJ_G0023515.1 mouse_genomes_project 17 35465086 35465704 + Vars protein_coding retained_intron MGP_LPJ_T0047107.1 MGP_LPJ_G0023515.1 mouse_genomes_project 17 35471546 35472731 + Vars protein_coding retained_intron MGP_LPJ_T0047108.1 MGP_LPJ_G0023515.1 mouse_genomes_project 17 35472495 35473414 + Vars protein_coding retained_intron MGP_LPJ_T0047109.1 MGP_LPJ_G0023515.1 mouse_genomes_project 17 35473614 35474801 + Vars protein_coding retained_intron MGP_LPJ_T0047110.1 MGP_LPJ_G0023515.1 mouse_genomes_project 17 35474158 35475379 + MGP_LPJ_P0047110 Vars protein_coding protein_coding MGP_LPJ_T0047111.1 MGP_LPJ_G0023515.1 mouse_genomes_project 17 35474167 35475169 + Vars protein_coding retained_intron MGP_LPJ_T0047112.1 MGP_LPJ_G0023515.1 mouse_genomes_project 17 35475296 35476343 + Vars protein_coding retained_intron MGP_LPJ_T0047420.1 MGP_LPJ_G0023588.1 mouse_genomes_project 17 37693498 37696898 + MGP_LPJ_P0047420 H2-M10.6 protein_coding protein_coding MGP_LPJ_T0013196.1 MGP_LPJ_G0011287.1 mouse_genomes_project 17 5870828 5875431 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006930.1 MGP_LPJ_G0005710.1 mouse_genomes_project 17 26880913 26883279 + Gm10505 lincRNA lincRNA MGP_LPJ_T0048491.1 MGP_LPJ_G0023971.1 mouse_genomes_project 17 84059419 84138445 + MGP_LPJ_P0048491 Arhgef33 protein_coding unknown_likely_coding MGP_LPJ_T0048492.1 MGP_LPJ_G0023971.1 mouse_genomes_project 17 84059557 84142842 + MGP_LPJ_P0048492 Arhgef33 protein_coding protein_coding MGP_LPJ_T0047828.1 MGP_LPJ_G0023750.1 mouse_genomes_project 17 49183330 49192406 + MGP_LPJ_P0047828 Mrps10 protein_coding protein_coding MGP_LPJ_T0047829.1 MGP_LPJ_G0023750.1 mouse_genomes_project 17 49183334 49192408 + MGP_LPJ_P0047829 Mrps10 protein_coding protein_coding MGP_LPJ_T0047830.1 MGP_LPJ_G0023750.1 mouse_genomes_project 17 49183335 49189652 + Mrps10 protein_coding retained_intron MGP_LPJ_T0047831.1 MGP_LPJ_G0023750.1 mouse_genomes_project 17 49183336 49188771 + MGP_LPJ_P0047831 Mrps10 protein_coding protein_coding MGP_LPJ_T0047832.1 MGP_LPJ_G0023750.1 mouse_genomes_project 17 49183341 49189696 + Mrps10 protein_coding retained_intron MGP_LPJ_T0047833.1 MGP_LPJ_G0023750.1 mouse_genomes_project 17 49183350 49193519 + MGP_LPJ_P0047833 Mrps10 protein_coding unknown_likely_coding MGP_LPJ_T0047834.1 MGP_LPJ_G0023750.1 mouse_genomes_project 17 49183640 49192406 + MGP_LPJ_P0047834 Mrps10 protein_coding protein_coding MGP_LPJ_T0047835.1 MGP_LPJ_G0023750.1 mouse_genomes_project 17 49183640 49192405 + MGP_LPJ_P0047835 Mrps10 protein_coding protein_coding MGP_LPJ_T0047836.1 MGP_LPJ_G0023750.1 mouse_genomes_project 17 49184553 49191529 + Mrps10 protein_coding retained_intron MGP_LPJ_T0047837.1 MGP_LPJ_G0023750.1 mouse_genomes_project 17 49186156 49191549 + Mrps10 protein_coding processed_transcript MGP_LPJ_T0047838.1 MGP_LPJ_G0023750.1 mouse_genomes_project 17 49189175 49196234 + Mrps10 protein_coding retained_intron MGP_LPJ_T0048306.1 MGP_LPJ_G0023909.1 mouse_genomes_project 17 74006083 74013085 - MGP_LPJ_P0048306 Tgif1 protein_coding protein_coding MGP_LPJ_T0048307.1 MGP_LPJ_G0023909.1 mouse_genomes_project 17 74006083 74011668 - MGP_LPJ_P0048307 Tgif1 protein_coding protein_coding MGP_LPJ_T0048308.1 MGP_LPJ_G0023909.1 mouse_genomes_project 17 74006089 74012947 - MGP_LPJ_P0048308 Tgif1 protein_coding protein_coding MGP_LPJ_T0048309.1 MGP_LPJ_G0023909.1 mouse_genomes_project 17 74006089 74015463 - MGP_LPJ_P0048309 Tgif1 protein_coding protein_coding MGP_LPJ_T0048310.1 MGP_LPJ_G0023909.1 mouse_genomes_project 17 74006089 74013644 - MGP_LPJ_P0048310 Tgif1 protein_coding protein_coding MGP_LPJ_T0048311.1 MGP_LPJ_G0023909.1 mouse_genomes_project 17 74006606 74011668 - MGP_LPJ_P0048311 Tgif1 protein_coding protein_coding MGP_LPJ_T0048312.1 MGP_LPJ_G0023909.1 mouse_genomes_project 17 74006747 74008205 - MGP_LPJ_P0048312 Tgif1 protein_coding protein_coding MGP_LPJ_T0048313.1 MGP_LPJ_G0023909.1 mouse_genomes_project 17 74006859 74009049 - MGP_LPJ_P0048313 Tgif1 protein_coding protein_coding MGP_LPJ_T0048314.1 MGP_LPJ_G0023909.1 mouse_genomes_project 17 74008059 74011522 - MGP_LPJ_P0048314 Tgif1 protein_coding protein_coding MGP_LPJ_T0048315.1 MGP_LPJ_G0023909.1 mouse_genomes_project 17 74008173 74013009 - Tgif1 protein_coding processed_transcript MGP_LPJ_T0048316.1 MGP_LPJ_G0023909.1 mouse_genomes_project 17 74008548 74011692 - Tgif1 protein_coding retained_intron MGP_LPJ_T0048317.1 MGP_LPJ_G0023909.1 mouse_genomes_project 17 74010251 74011685 - Tgif1 protein_coding processed_transcript MGP_LPJ_T0046225.1 MGP_LPJ_G0023314.1 mouse_genomes_project 17 26377136 26406950 + MGP_LPJ_P0046225 Kifc5b protein_coding protein_coding MGP_LPJ_T0047492.1 MGP_LPJ_G0023607.1 mouse_genomes_project 17 38127752 38129956 + MGP_LPJ_P0047492 Ubd protein_coding protein_coding MGP_LPJ_T0047398.1 MGP_LPJ_G0023578.1 mouse_genomes_project 17 37012061 37013253 - MGP_LPJ_P0047398 protein_coding protein_coding MGP_LPJ_T0046682.1 MGP_LPJ_G0023427.1 mouse_genomes_project 17 33135017 33150313 - MGP_LPJ_P0046682 Zfp763 protein_coding protein_coding MGP_LPJ_T0046683.1 MGP_LPJ_G0023427.1 mouse_genomes_project 17 33137913 33150079 - Zfp763 protein_coding processed_transcript MGP_LPJ_T0013217.1 MGP_LPJ_G0011308.1 mouse_genomes_project 17 34388268 34388481 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101964.1 MGP_LPJ_G0040001.1 mouse_genomes_project 17 36916320 36919583 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0048045.1 MGP_LPJ_G0023811.1 mouse_genomes_project 17 58297749 58302081 + MGP_LPJ_P0048045 Ebi3 protein_coding protein_coding MGP_LPJ_T0045509.1 MGP_LPJ_G0023093.1 mouse_genomes_project 17 15830998 15832711 + Spaca6 protein_coding processed_transcript MGP_LPJ_T0045510.1 MGP_LPJ_G0023093.1 mouse_genomes_project 17 15831172 15832344 + Spaca6 protein_coding retained_intron MGP_LPJ_T0045511.1 MGP_LPJ_G0023093.1 mouse_genomes_project 17 15831283 15839380 + MGP_LPJ_P0045511 Spaca6 protein_coding protein_coding MGP_LPJ_T0045512.1 MGP_LPJ_G0023093.1 mouse_genomes_project 17 15831343 15843316 + MGP_LPJ_P0045512 Spaca6 protein_coding nonsense_mediated_decay MGP_LPJ_T0045513.1 MGP_LPJ_G0023093.1 mouse_genomes_project 17 15831459 15838819 + Spaca6 protein_coding processed_transcript MGP_LPJ_T0045514.1 MGP_LPJ_G0023093.1 mouse_genomes_project 17 15831459 15838819 + Spaca6 protein_coding retained_intron MGP_LPJ_T0045515.1 MGP_LPJ_G0023093.1 mouse_genomes_project 17 15831723 15838033 + MGP_LPJ_P0045515 Spaca6 protein_coding protein_coding MGP_LPJ_T0045516.1 MGP_LPJ_G0023093.1 mouse_genomes_project 17 15832312 15836463 + Spaca6 protein_coding retained_intron MGP_LPJ_T0045517.1 MGP_LPJ_G0023093.1 mouse_genomes_project 17 15833221 15837335 + Spaca6 protein_coding retained_intron MGP_LPJ_T0045518.1 MGP_LPJ_G0023093.1 mouse_genomes_project 17 15836258 15838832 + Spaca6 protein_coding retained_intron MGP_LPJ_T0045519.1 MGP_LPJ_G0023093.1 mouse_genomes_project 17 15837813 15839380 + Spaca6 protein_coding retained_intron MGP_LPJ_T0045520.1 MGP_LPJ_G0023093.1 mouse_genomes_project 17 15838003 15839376 + MGP_LPJ_P0045520 Spaca6 protein_coding nonsense_mediated_decay MGP_LPJ_T0045521.1 MGP_LPJ_G0023093.1 mouse_genomes_project 17 15838590 15839380 + Spaca6 protein_coding retained_intron MGP_LPJ_T0045522.1 MGP_LPJ_G0023093.1 mouse_genomes_project 17 15838880 15839380 + Spaca6 protein_coding retained_intron MGP_LPJ_T0047676.1 MGP_LPJ_G0023706.1 mouse_genomes_project 17 47334119 47362647 - MGP_LPJ_P0047676 Tmem63b protein_coding protein_coding MGP_LPJ_T0047677.1 MGP_LPJ_G0023706.1 mouse_genomes_project 17 47336957 47339147 - Tmem63b protein_coding retained_intron MGP_LPJ_T0047678.1 MGP_LPJ_G0023706.1 mouse_genomes_project 17 47338051 47340405 - Tmem63b protein_coding retained_intron MGP_LPJ_T0047679.1 MGP_LPJ_G0023706.1 mouse_genomes_project 17 47341664 47362361 - MGP_LPJ_P0047679 Tmem63b protein_coding protein_coding MGP_LPJ_T0047680.1 MGP_LPJ_G0023706.1 mouse_genomes_project 17 47344891 47363293 - MGP_LPJ_P0047680 Tmem63b protein_coding protein_coding MGP_LPJ_T0047681.1 MGP_LPJ_G0023706.1 mouse_genomes_project 17 47348627 47357011 - MGP_LPJ_P0047681 Tmem63b protein_coding protein_coding MGP_LPJ_T0047682.1 MGP_LPJ_G0023706.1 mouse_genomes_project 17 47348857 47362525 - MGP_LPJ_P0047682 Tmem63b protein_coding protein_coding MGP_LPJ_T0047683.1 MGP_LPJ_G0023706.1 mouse_genomes_project 17 47355350 47362508 - MGP_LPJ_P0047683 Tmem63b protein_coding protein_coding MGP_LPJ_T0047684.1 MGP_LPJ_G0023706.1 mouse_genomes_project 17 47362611 47363275 - Tmem63b protein_coding processed_transcript MGP_LPJ_T0010236.1 MGP_LPJ_G0008354.1 mouse_genomes_project 17 67145278 67145368 - Gm24194 miRNA miRNA MGP_LPJ_T0047259.1 MGP_LPJ_G0023555.1 mouse_genomes_project 17 36179437 36190112 - protein_coding processed_transcript MGP_LPJ_T0101969.1 MGP_LPJ_G0040006.1 mouse_genomes_project 17 37369542 37369763 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0003781.1 MGP_LPJ_G0003403.1 mouse_genomes_project 17 46375667 46377412 + Runx2os1 antisense antisense MGP_LPJ_T0013237.1 MGP_LPJ_G0011328.1 mouse_genomes_project 17 39069916 39070778 + processed_pseudogene processed_pseudogene MGP_LPJ_T0046411.1 MGP_LPJ_G0023357.1 mouse_genomes_project 17 28504174 28544774 + MGP_LPJ_P0046411 Brpf3 protein_coding protein_coding MGP_LPJ_T0046412.1 MGP_LPJ_G0023357.1 mouse_genomes_project 17 28504869 28509394 + Brpf3 protein_coding processed_transcript MGP_LPJ_T0046413.1 MGP_LPJ_G0023357.1 mouse_genomes_project 17 28513325 28522464 + Brpf3 protein_coding processed_transcript MGP_LPJ_T0046414.1 MGP_LPJ_G0023357.1 mouse_genomes_project 17 28514217 28544721 + Brpf3 protein_coding retained_intron MGP_LPJ_T0046415.1 MGP_LPJ_G0023357.1 mouse_genomes_project 17 28519719 28522850 + Brpf3 protein_coding retained_intron MGP_LPJ_T0046416.1 MGP_LPJ_G0023357.1 mouse_genomes_project 17 28519872 28523088 + Brpf3 protein_coding processed_transcript MGP_LPJ_T0046417.1 MGP_LPJ_G0023357.1 mouse_genomes_project 17 28528866 28542926 + Brpf3 protein_coding processed_transcript MGP_LPJ_T0046418.1 MGP_LPJ_G0023357.1 mouse_genomes_project 17 28529821 28542964 + Brpf3 protein_coding processed_transcript MGP_LPJ_T0046419.1 MGP_LPJ_G0023357.1 mouse_genomes_project 17 28529901 28544769 + Brpf3 protein_coding processed_transcript MGP_LPJ_T0046420.1 MGP_LPJ_G0023357.1 mouse_genomes_project 17 28534309 28543019 + Brpf3 protein_coding processed_transcript MGP_LPJ_T0048049.1 MGP_LPJ_G0023814.1 mouse_genomes_project 17 58331934 58342267 + MGP_LPJ_P0048049 Fsd1 protein_coding protein_coding MGP_LPJ_T0045300.1 MGP_LPJ_G0023028.1 mouse_genomes_project 17 4929016 4957708 + MGP_LPJ_P0045300 protein_coding protein_coding MGP_LPJ_T0045979.1 MGP_LPJ_G0023256.1 mouse_genomes_project 17 24659855 24663092 + MGP_LPJ_P0045979 Prss28 protein_coding protein_coding MGP_LPJ_T0046668.1 MGP_LPJ_G0023422.1 mouse_genomes_project 17 32986179 32993054 - MGP_LPJ_P0046668 Zfp870 protein_coding protein_coding MGP_LPJ_T0046614.1 MGP_LPJ_G0023407.1 mouse_genomes_project 17 32242016 32341023 - MGP_LPJ_P0046614 Brd4 protein_coding protein_coding MGP_LPJ_T0046615.1 MGP_LPJ_G0023407.1 mouse_genomes_project 17 32242016 32341011 - MGP_LPJ_P0046615 Brd4 protein_coding protein_coding MGP_LPJ_T0046616.1 MGP_LPJ_G0023407.1 mouse_genomes_project 17 32242018 32341011 - MGP_LPJ_P0046616 Brd4 protein_coding protein_coding MGP_LPJ_T0046617.1 MGP_LPJ_G0023407.1 mouse_genomes_project 17 32243494 32248461 - MGP_LPJ_P0046617 Brd4 protein_coding unknown_likely_coding MGP_LPJ_T0046618.1 MGP_LPJ_G0023407.1 mouse_genomes_project 17 32250652 32341023 - MGP_LPJ_P0046618 Brd4 protein_coding protein_coding MGP_LPJ_T0046619.1 MGP_LPJ_G0023407.1 mouse_genomes_project 17 32252414 32341037 - MGP_LPJ_P0046619 Brd4 protein_coding protein_coding MGP_LPJ_T0046620.1 MGP_LPJ_G0023407.1 mouse_genomes_project 17 32259091 32343083 - MGP_LPJ_P0046620 Brd4 protein_coding protein_coding MGP_LPJ_T0046621.1 MGP_LPJ_G0023407.1 mouse_genomes_project 17 32259126 32343038 - MGP_LPJ_P0046621 Brd4 protein_coding nonsense_mediated_decay MGP_LPJ_T0047494.1 MGP_LPJ_G0023609.1 mouse_genomes_project 17 38146161 38147135 - MGP_LPJ_P0047494 Olfr95 protein_coding protein_coding MGP_LPJ_T0010193.1 MGP_LPJ_G0008311.1 mouse_genomes_project 17 23513217 23513280 - Mir6965 miRNA miRNA MGP_LPJ_T0013264.1 MGP_LPJ_G0011355.1 mouse_genomes_project 17 78631530 78632109 + processed_pseudogene processed_pseudogene MGP_LPJ_T0101928.1 MGP_LPJ_G0039965.1 mouse_genomes_project 17 18512181 18513112 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0101938.1 MGP_LPJ_G0039975.1 mouse_genomes_project 17 19987169 19987352 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0046274.1 MGP_LPJ_G0023330.1 mouse_genomes_project 17 27153963 27203797 - MGP_LPJ_P0046274 Nudt3 protein_coding protein_coding MGP_LPJ_T0046275.1 MGP_LPJ_G0023330.1 mouse_genomes_project 17 27155156 27203296 - MGP_LPJ_P0046275 Nudt3 protein_coding protein_coding MGP_LPJ_T0046276.1 MGP_LPJ_G0023330.1 mouse_genomes_project 17 27155287 27157917 - Nudt3 protein_coding retained_intron MGP_LPJ_T0046277.1 MGP_LPJ_G0023330.1 mouse_genomes_project 17 27155370 27203595 - MGP_LPJ_P0046277 Nudt3 protein_coding protein_coding MGP_LPJ_T0046278.1 MGP_LPJ_G0023330.1 mouse_genomes_project 17 27155415 27202725 - Nudt3 protein_coding processed_transcript MGP_LPJ_T0046279.1 MGP_LPJ_G0023330.1 mouse_genomes_project 17 27155534 27189849 - Nudt3 protein_coding processed_transcript MGP_LPJ_T0046280.1 MGP_LPJ_G0023330.1 mouse_genomes_project 17 27156557 27203595 - MGP_LPJ_P0046280 Nudt3 protein_coding protein_coding MGP_LPJ_T0046281.1 MGP_LPJ_G0023330.1 mouse_genomes_project 17 27156630 27203176 - MGP_LPJ_P0046281 Nudt3 protein_coding protein_coding MGP_LPJ_T0046282.1 MGP_LPJ_G0023330.1 mouse_genomes_project 17 27174758 27203595 - Nudt3 protein_coding retained_intron MGP_LPJ_T0101506.1 MGP_LPJ_G0039640.1 mouse_genomes_project 17 74726493 74754225 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101507.1 MGP_LPJ_G0039640.1 mouse_genomes_project 17 74728660 74743987 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0099240.1 MGP_LPJ_G0037503.1 mouse_genomes_project 17 88553724 88553833 + Gm26066 snRNA snRNA MGP_LPJ_T0011443.1 MGP_LPJ_G0009561.1 mouse_genomes_project 17 37908856 37909104 + Gm22388 misc_RNA misc_RNA MGP_LPJ_T0046678.1 MGP_LPJ_G0023426.1 mouse_genomes_project 17 33107148 33112971 + Zfp952 protein_coding processed_transcript MGP_LPJ_T0046679.1 MGP_LPJ_G0023426.1 mouse_genomes_project 17 33107216 33120846 + Zfp952 protein_coding processed_transcript MGP_LPJ_T0046680.1 MGP_LPJ_G0023426.1 mouse_genomes_project 17 33107216 33120846 + MGP_LPJ_P0046680 Zfp952 protein_coding protein_coding MGP_LPJ_T0046681.1 MGP_LPJ_G0023426.1 mouse_genomes_project 17 33107220 33118475 + MGP_LPJ_P0046681 Zfp952 protein_coding protein_coding MGP_LPJ_T0046755.1 MGP_LPJ_G0023447.1 mouse_genomes_project 17 34032097 34037560 - MGP_LPJ_P0046755 Rps28 protein_coding protein_coding MGP_LPJ_T0046758.1 MGP_LPJ_G0023447.1 mouse_genomes_project 17 34036106 34037630 - MGP_LPJ_P0046758 Rps28 protein_coding protein_coding MGP_LPJ_T0046759.1 MGP_LPJ_G0023447.1 mouse_genomes_project 17 34036107 34037562 - MGP_LPJ_P0046759 Rps28 protein_coding protein_coding MGP_LPJ_T0046760.1 MGP_LPJ_G0023447.1 mouse_genomes_project 17 34036120 34037533 - Rps28 protein_coding processed_transcript MGP_LPJ_T0046761.1 MGP_LPJ_G0023447.1 mouse_genomes_project 17 34036120 34037630 - MGP_LPJ_P0046761 Rps28 protein_coding protein_coding MGP_LPJ_T0046762.1 MGP_LPJ_G0023447.1 mouse_genomes_project 17 34036122 34037544 - MGP_LPJ_P0046762 Rps28 protein_coding protein_coding MGP_LPJ_T0046763.1 MGP_LPJ_G0023447.1 mouse_genomes_project 17 34036656 34037552 - Rps28 protein_coding retained_intron MGP_LPJ_T0101933.1 MGP_LPJ_G0039970.1 mouse_genomes_project 17 19595113 19596052 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0047786.1 MGP_LPJ_G0023730.1 mouse_genomes_project 17 48314626 48385146 - MGP_LPJ_P0047786 Ptk7 protein_coding protein_coding MGP_LPJ_T0047004.1 MGP_LPJ_G0023495.1 mouse_genomes_project 17 34998533 35000094 + MGP_LPJ_P0047004 Fkbpl protein_coding protein_coding MGP_LPJ_T0047005.1 MGP_LPJ_G0023495.1 mouse_genomes_project 17 34998610 34999092 + MGP_LPJ_P0047005 Fkbpl protein_coding protein_coding MGP_LPJ_T0101920.1 MGP_LPJ_G0039957.1 mouse_genomes_project 17 16579441 16580721 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0045531.1 MGP_LPJ_G0023100.1 mouse_genomes_project 17 16042573 16066245 + MGP_LPJ_P0045531 Vmn2r124 protein_coding protein_coding MGP_LPJ_T0046025.1 MGP_LPJ_G0023268.1 mouse_genomes_project 17 25113933 25119608 + MGP_LPJ_P0046025 Rpusd1 protein_coding protein_coding MGP_LPJ_T0003723.1 MGP_LPJ_G0003362.1 mouse_genomes_project 17 7882201 7957191 + Gm16168 antisense antisense MGP_LPJ_T0003724.1 MGP_LPJ_G0003362.1 mouse_genomes_project 17 7882208 7941036 + Gm16168 antisense antisense MGP_LPJ_T0048372.1 MGP_LPJ_G0023924.1 mouse_genomes_project 17 75085476 75877629 - MGP_LPJ_P0048372 Alk protein_coding protein_coding MGP_LPJ_T0100481.1 MGP_LPJ_G0038744.1 mouse_genomes_project 17 67790519 67790651 - Gm25344 snoRNA snoRNA MGP_LPJ_T0099225.1 MGP_LPJ_G0037488.1 mouse_genomes_project 17 49720253 49720423 - Gm25201 snRNA snRNA MGP_LPJ_T0046890.1 MGP_LPJ_G0023470.1 mouse_genomes_project 17 34423040 34429922 + MGP_LPJ_P0046890 H2-DMb1 protein_coding protein_coding MGP_LPJ_T0045453.1 MGP_LPJ_G0023077.1 mouse_genomes_project 17 12745195 12747948 + MGP_LPJ_P0045453 1600012H06Rik protein_coding protein_coding MGP_LPJ_T0045454.1 MGP_LPJ_G0023077.1 mouse_genomes_project 17 12745241 12747946 + MGP_LPJ_P0045454 1600012H06Rik protein_coding protein_coding MGP_LPJ_T0045455.1 MGP_LPJ_G0023077.1 mouse_genomes_project 17 12745280 12746998 + MGP_LPJ_P0045455 1600012H06Rik protein_coding protein_coding MGP_LPJ_T0045456.1 MGP_LPJ_G0023077.1 mouse_genomes_project 17 12745282 12761570 + 1600012H06Rik protein_coding processed_transcript MGP_LPJ_T0101991.1 MGP_LPJ_G0040028.1 mouse_genomes_project 17 39309220 39310933 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0045323.1 MGP_LPJ_G0023038.1 mouse_genomes_project 17 5574967 5590749 + MGP_LPJ_P0045323 Mpc1 protein_coding protein_coding MGP_LPJ_T0045324.1 MGP_LPJ_G0023038.1 mouse_genomes_project 17 5575855 5586137 + Mpc1 protein_coding retained_intron MGP_LPJ_T0045325.1 MGP_LPJ_G0023038.1 mouse_genomes_project 17 5575911 5591055 + MGP_LPJ_P0045325 Mpc1 protein_coding protein_coding MGP_LPJ_T0045326.1 MGP_LPJ_G0023038.1 mouse_genomes_project 17 5588613 5591014 + Mpc1 protein_coding retained_intron MGP_LPJ_T0010201.1 MGP_LPJ_G0008319.1 mouse_genomes_project 17 26409842 26409910 + Mir6968 miRNA miRNA MGP_LPJ_T0046451.1 MGP_LPJ_G0023364.1 mouse_genomes_project 17 28849519 28858026 + MGP_LPJ_P0046451 Cdkn1a protein_coding protein_coding MGP_LPJ_T0046452.1 MGP_LPJ_G0023364.1 mouse_genomes_project 17 28852312 28859212 + MGP_LPJ_P0046452 Cdkn1a protein_coding protein_coding MGP_LPJ_T0046453.1 MGP_LPJ_G0023364.1 mouse_genomes_project 17 28856705 28858068 + MGP_LPJ_P0046453 Cdkn1a protein_coding protein_coding MGP_LPJ_T0013231.1 MGP_LPJ_G0011322.1 mouse_genomes_project 17 38849636 38850573 + processed_pseudogene processed_pseudogene MGP_LPJ_T0047413.1 MGP_LPJ_G0023582.1 mouse_genomes_project 17 37178381 37180619 - MGP_LPJ_P0047413 H2-M10.3 protein_coding protein_coding MGP_LPJ_T0045612.1 MGP_LPJ_G0023158.1 mouse_genomes_project 17 21438354 21461728 + Zfp946 protein_coding processed_transcript MGP_LPJ_T0045613.1 MGP_LPJ_G0023158.1 mouse_genomes_project 17 21438391 21472086 + MGP_LPJ_P0045613 Zfp946 protein_coding protein_coding MGP_LPJ_T0045614.1 MGP_LPJ_G0023158.1 mouse_genomes_project 17 21438400 21472086 + MGP_LPJ_P0045614 Zfp946 protein_coding protein_coding MGP_LPJ_T0045615.1 MGP_LPJ_G0023158.1 mouse_genomes_project 17 21465415 21471235 + MGP_LPJ_P0045615 Zfp946 protein_coding protein_coding MGP_LPJ_T0010208.1 MGP_LPJ_G0008326.1 mouse_genomes_project 17 28199676 28199802 + Gm25195 miRNA miRNA MGP_LPJ_T0099228.1 MGP_LPJ_G0037491.1 mouse_genomes_project 17 57997047 57997152 + Gm22654 snRNA snRNA MGP_LPJ_T0048182.1 MGP_LPJ_G0023869.1 mouse_genomes_project 17 59687217 59700670 - MGP_LPJ_P0048182 Gpr108 protein_coding protein_coding MGP_LPJ_T0045698.1 MGP_LPJ_G0023187.1 mouse_genomes_project 17 23141977 23156996 + MGP_LPJ_P0045698 protein_coding protein_coding MGP_LPJ_T0010241.1 MGP_LPJ_G0008359.1 mouse_genomes_project 17 81966155 81966241 + Gm25069 miRNA miRNA MGP_LPJ_T0101915.1 MGP_LPJ_G0039952.1 mouse_genomes_project 17 4935028 4950110 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0047932.1 MGP_LPJ_G0023773.1 mouse_genomes_project 17 50068762 50085757 - MGP_LPJ_P0047932 protein_coding protein_coding MGP_LPJ_T0047561.1 MGP_LPJ_G0023666.1 mouse_genomes_project 17 42024375 42028399 + MGP_LPJ_P0047561 Esp4 protein_coding protein_coding MGP_LPJ_T0045884.1 MGP_LPJ_G0023239.1 mouse_genomes_project 17 24227092 24228125 + MGP_LPJ_P0045884 Nme3 protein_coding protein_coding MGP_LPJ_T0045885.1 MGP_LPJ_G0023239.1 mouse_genomes_project 17 24227097 24227938 + Nme3 protein_coding processed_transcript MGP_LPJ_T0045886.1 MGP_LPJ_G0023239.1 mouse_genomes_project 17 24227113 24227847 + Nme3 protein_coding retained_intron MGP_LPJ_T0045887.1 MGP_LPJ_G0023239.1 mouse_genomes_project 17 24227115 24228087 + Nme3 protein_coding retained_intron MGP_LPJ_T0045888.1 MGP_LPJ_G0023239.1 mouse_genomes_project 17 24227353 24227950 + Nme3 protein_coding retained_intron MGP_LPJ_T0003775.1 MGP_LPJ_G0003400.1 mouse_genomes_project 17 45150156 45153326 - 1700071M16Rik antisense antisense MGP_LPJ_T0003776.1 MGP_LPJ_G0003400.1 mouse_genomes_project 17 45150349 45153326 - 1700071M16Rik antisense antisense MGP_LPJ_T0003777.1 MGP_LPJ_G0003400.1 mouse_genomes_project 17 45152976 45154258 - 1700071M16Rik antisense antisense MGP_LPJ_T0003778.1 MGP_LPJ_G0003400.1 mouse_genomes_project 17 45152976 45154248 - 1700071M16Rik antisense antisense MGP_LPJ_T0013207.1 MGP_LPJ_G0011298.1 mouse_genomes_project 17 20854504 20854952 - processed_pseudogene processed_pseudogene MGP_LPJ_T0047524.1 MGP_LPJ_G0023635.1 mouse_genomes_project 17 38797718 38798659 + MGP_LPJ_P0047524 Olfr123 protein_coding protein_coding MGP_LPJ_T0010186.1 MGP_LPJ_G0008304.1 mouse_genomes_project 17 15830622 15830739 - Gm25927 miRNA miRNA MGP_LPJ_T0047399.1 MGP_LPJ_G0023579.1 mouse_genomes_project 17 37019370 37021581 - MGP_LPJ_P0047399 Rpp21 protein_coding nonsense_mediated_decay MGP_LPJ_T0047400.1 MGP_LPJ_G0023579.1 mouse_genomes_project 17 37019392 37021568 - Rpp21 protein_coding retained_intron MGP_LPJ_T0047401.1 MGP_LPJ_G0023579.1 mouse_genomes_project 17 37019392 37022036 - MGP_LPJ_P0047401 Rpp21 protein_coding protein_coding MGP_LPJ_T0047402.1 MGP_LPJ_G0023579.1 mouse_genomes_project 17 37019398 37020078 - Rpp21 protein_coding retained_intron MGP_LPJ_T0047403.1 MGP_LPJ_G0023579.1 mouse_genomes_project 17 37019437 37021335 - MGP_LPJ_P0047403 Rpp21 protein_coding nonsense_mediated_decay MGP_LPJ_T0047404.1 MGP_LPJ_G0023579.1 mouse_genomes_project 17 37019669 37021580 - Rpp21 protein_coding retained_intron MGP_LPJ_T0046102.1 MGP_LPJ_G0023286.1 mouse_genomes_project 17 25276331 25279007 - MGP_LPJ_P0046102 Wfikkn1 protein_coding protein_coding MGP_LPJ_T0046103.1 MGP_LPJ_G0023286.1 mouse_genomes_project 17 25277505 25278938 - MGP_LPJ_P0046103 Wfikkn1 protein_coding protein_coding MGP_LPJ_T0003784.1 MGP_LPJ_G0003406.1 mouse_genomes_project 17 49551773 49555283 + Tomm6os antisense antisense MGP_LPJ_T0001021.1 MGP_LPJ_G0000946.1 mouse_genomes_project 17 53996083 53999258 - TEC TEC MGP_LPJ_T0013258.1 MGP_LPJ_G0011349.1 mouse_genomes_project 17 70865845 70866783 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011451.1 MGP_LPJ_G0009569.1 mouse_genomes_project 17 79633760 79633868 - Gm26124 misc_RNA misc_RNA MGP_LPJ_T0003719.1 MGP_LPJ_G0003361.1 mouse_genomes_project 17 7838956 7859620 + A230009B12Rik antisense antisense MGP_LPJ_T0003720.1 MGP_LPJ_G0003361.1 mouse_genomes_project 17 7838962 7859256 + A230009B12Rik antisense antisense MGP_LPJ_T0003721.1 MGP_LPJ_G0003361.1 mouse_genomes_project 17 7839036 7878727 + A230009B12Rik antisense antisense MGP_LPJ_T0003722.1 MGP_LPJ_G0003361.1 mouse_genomes_project 17 7848632 7859255 + A230009B12Rik antisense antisense MGP_LPJ_T0048370.1 MGP_LPJ_G0023923.1 mouse_genomes_project 17 74993243 75074397 + MGP_LPJ_P0048370 Clip4 protein_coding protein_coding MGP_LPJ_T0048371.1 MGP_LPJ_G0023923.1 mouse_genomes_project 17 74994583 75074369 + MGP_LPJ_P0048371 Clip4 protein_coding unknown_likely_coding MGP_LPJ_T0010218.1 MGP_LPJ_G0008336.1 mouse_genomes_project 17 35267773 35267840 - Mir6970 miRNA miRNA MGP_LPJ_T0045726.1 MGP_LPJ_G0023197.1 mouse_genomes_project 17 23434147 23458636 - MGP_LPJ_P0045726 Gm43796 protein_coding protein_coding MGP_LPJ_T0048512.1 MGP_LPJ_G0023983.1 mouse_genomes_project 17 87174594 87307238 + MGP_LPJ_P0048512 Eml4 protein_coding protein_coding MGP_LPJ_T0048513.1 MGP_LPJ_G0023983.1 mouse_genomes_project 17 87174594 87307238 + MGP_LPJ_P0048513 Eml4 protein_coding protein_coding MGP_LPJ_T0048514.1 MGP_LPJ_G0023983.1 mouse_genomes_project 17 87174594 87307238 + MGP_LPJ_P0048514 Eml4 protein_coding protein_coding MGP_LPJ_T0046449.1 MGP_LPJ_G0023363.1 mouse_genomes_project 17 28784314 28794645 + protein_coding retained_intron MGP_LPJ_T0046450.1 MGP_LPJ_G0023363.1 mouse_genomes_project 17 28789149 28792890 + protein_coding retained_intron MGP_LPJ_T0013205.1 MGP_LPJ_G0011296.1 mouse_genomes_project 17 11164535 11165033 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010206.1 MGP_LPJ_G0008324.1 mouse_genomes_project 17 26895219 26895281 + Mir7217 miRNA miRNA MGP_LPJ_T0046104.1 MGP_LPJ_G0023287.1 mouse_genomes_project 17 25280819 25321777 - MGP_LPJ_P0046104 Rab40c protein_coding nonsense_mediated_decay MGP_LPJ_T0046105.1 MGP_LPJ_G0023287.1 mouse_genomes_project 17 25280819 25321873 - MGP_LPJ_P0046105 Rab40c protein_coding protein_coding MGP_LPJ_T0046106.1 MGP_LPJ_G0023287.1 mouse_genomes_project 17 25280819 25321863 - MGP_LPJ_P0046106 Rab40c protein_coding protein_coding MGP_LPJ_T0046107.1 MGP_LPJ_G0023287.1 mouse_genomes_project 17 25280819 25321935 - MGP_LPJ_P0046107 Rab40c protein_coding protein_coding MGP_LPJ_T0046108.1 MGP_LPJ_G0023287.1 mouse_genomes_project 17 25280822 25315853 - Rab40c protein_coding processed_transcript MGP_LPJ_T0046109.1 MGP_LPJ_G0023287.1 mouse_genomes_project 17 25282333 25321727 - MGP_LPJ_P0046109 Rab40c protein_coding protein_coding MGP_LPJ_T0046110.1 MGP_LPJ_G0023287.1 mouse_genomes_project 17 25282344 25321948 - MGP_LPJ_P0046110 Rab40c protein_coding protein_coding MGP_LPJ_T0046111.1 MGP_LPJ_G0023287.1 mouse_genomes_project 17 25283468 25321911 - Rab40c protein_coding processed_transcript MGP_LPJ_T0046112.1 MGP_LPJ_G0023287.1 mouse_genomes_project 17 25283787 25321932 - MGP_LPJ_P0046112 Rab40c protein_coding protein_coding MGP_LPJ_T0047065.1 MGP_LPJ_G0023507.1 mouse_genomes_project 17 35337475 35365724 + MGP_LPJ_P0047065 Ehmt2 protein_coding protein_coding MGP_LPJ_T0047066.1 MGP_LPJ_G0023507.1 mouse_genomes_project 17 35337505 35365720 + MGP_LPJ_P0047066 Ehmt2 protein_coding protein_coding MGP_LPJ_T0047067.1 MGP_LPJ_G0023507.1 mouse_genomes_project 17 35337960 35365717 + MGP_LPJ_P0047067 Ehmt2 protein_coding protein_coding MGP_LPJ_T0047068.1 MGP_LPJ_G0023507.1 mouse_genomes_project 17 35337977 35365724 + MGP_LPJ_P0047068 Ehmt2 protein_coding protein_coding MGP_LPJ_T0047069.1 MGP_LPJ_G0023507.1 mouse_genomes_project 17 35338700 35347218 + Ehmt2 protein_coding processed_transcript MGP_LPJ_T0047070.1 MGP_LPJ_G0023507.1 mouse_genomes_project 17 35349797 35350846 + Ehmt2 protein_coding retained_intron MGP_LPJ_T0047071.1 MGP_LPJ_G0023507.1 mouse_genomes_project 17 35349834 35350635 + Ehmt2 protein_coding retained_intron MGP_LPJ_T0047072.1 MGP_LPJ_G0023507.1 mouse_genomes_project 17 35350504 35351220 + Ehmt2 protein_coding retained_intron MGP_LPJ_T0047073.1 MGP_LPJ_G0023507.1 mouse_genomes_project 17 35350596 35353153 + MGP_LPJ_P0047073 Ehmt2 protein_coding protein_coding MGP_LPJ_T0047074.1 MGP_LPJ_G0023507.1 mouse_genomes_project 17 35351338 35353038 + Ehmt2 protein_coding processed_transcript MGP_LPJ_T0047075.1 MGP_LPJ_G0023507.1 mouse_genomes_project 17 35351992 35365720 + MGP_LPJ_P0047075 Ehmt2 protein_coding nonsense_mediated_decay MGP_LPJ_T0047076.1 MGP_LPJ_G0023507.1 mouse_genomes_project 17 35351994 35353397 + MGP_LPJ_P0047076 Ehmt2 protein_coding protein_coding MGP_LPJ_T0047077.1 MGP_LPJ_G0023507.1 mouse_genomes_project 17 35353239 35356097 + Ehmt2 protein_coding retained_intron MGP_LPJ_T0047078.1 MGP_LPJ_G0023507.1 mouse_genomes_project 17 35355569 35365725 + Ehmt2 protein_coding retained_intron MGP_LPJ_T0010231.1 MGP_LPJ_G0008349.1 mouse_genomes_project 17 58525929 58526042 - Gm44397 miRNA miRNA MGP_LPJ_T0048345.1 MGP_LPJ_G0023916.1 mouse_genomes_project 17 74536632 74548607 - Smchd1 protein_coding processed_transcript MGP_LPJ_T0048346.1 MGP_LPJ_G0023916.1 mouse_genomes_project 17 74536632 74666729 - MGP_LPJ_P0048346 Smchd1 protein_coding protein_coding MGP_LPJ_T0048347.1 MGP_LPJ_G0023916.1 mouse_genomes_project 17 74538653 74541150 - Smchd1 protein_coding retained_intron MGP_LPJ_T0048348.1 MGP_LPJ_G0023916.1 mouse_genomes_project 17 74541063 74553975 - Smchd1 protein_coding retained_intron MGP_LPJ_T0048349.1 MGP_LPJ_G0023916.1 mouse_genomes_project 17 74543020 74545530 - Smchd1 protein_coding retained_intron MGP_LPJ_T0048350.1 MGP_LPJ_G0023916.1 mouse_genomes_project 17 74549196 74553222 - Smchd1 protein_coding retained_intron MGP_LPJ_T0048351.1 MGP_LPJ_G0023916.1 mouse_genomes_project 17 74579550 74580797 - Smchd1 protein_coding retained_intron MGP_LPJ_T0048352.1 MGP_LPJ_G0023916.1 mouse_genomes_project 17 74584180 74585000 - Smchd1 protein_coding retained_intron MGP_LPJ_T0048356.1 MGP_LPJ_G0023916.1 mouse_genomes_project 17 74663924 74666714 - Smchd1 protein_coding retained_intron MGP_LPJ_T0001012.1 MGP_LPJ_G0000938.1 mouse_genomes_project 17 9167964 9174433 - TEC TEC MGP_LPJ_T0046669.1 MGP_LPJ_G0023423.1 mouse_genomes_project 17 33015428 33029044 - MGP_LPJ_P0046669 Cyp4f14 protein_coding unknown_likely_coding MGP_LPJ_T0013275.1 MGP_LPJ_G0011366.1 mouse_genomes_project 17 89609882 89610222 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001013.1 MGP_LPJ_G0000939.1 mouse_genomes_project 17 30344655 30346119 + TEC TEC MGP_LPJ_T0001014.1 MGP_LPJ_G0000939.1 mouse_genomes_project 17 30345505 30345958 + TEC TEC MGP_LPJ_T0046401.1 MGP_LPJ_G0023355.1 mouse_genomes_project 17 28387012 28449269 + MGP_LPJ_P0046401 Mapk14 protein_coding protein_coding MGP_LPJ_T0046402.1 MGP_LPJ_G0023355.1 mouse_genomes_project 17 28387012 28442029 + MGP_LPJ_P0046402 Mapk14 protein_coding protein_coding MGP_LPJ_T0046403.1 MGP_LPJ_G0023355.1 mouse_genomes_project 17 28387012 28449269 + MGP_LPJ_P0046403 Mapk14 protein_coding protein_coding MGP_LPJ_T0046404.1 MGP_LPJ_G0023355.1 mouse_genomes_project 17 28387110 28427746 + MGP_LPJ_P0046404 Mapk14 protein_coding protein_coding MGP_LPJ_T0046405.1 MGP_LPJ_G0023355.1 mouse_genomes_project 17 28387410 28449274 + MGP_LPJ_P0046405 Mapk14 protein_coding protein_coding MGP_LPJ_T0046406.1 MGP_LPJ_G0023355.1 mouse_genomes_project 17 28442483 28447222 + Mapk14 protein_coding retained_intron MGP_LPJ_T0045280.1 MGP_LPJ_G0023016.1 mouse_genomes_project 17 3567502 3750915 + MGP_LPJ_P0045280 protein_coding protein_coding MGP_LPJ_T0048490.1 MGP_LPJ_G0023970.1 mouse_genomes_project 17 84041288 84049623 + MGP_LPJ_P0048490 Morn2 protein_coding protein_coding MGP_LPJ_T0046778.1 MGP_LPJ_G0023450.1 mouse_genomes_project 17 34133194 34135204 + MGP_LPJ_P0046778 Daxx protein_coding protein_coding MGP_LPJ_T0046779.1 MGP_LPJ_G0023450.1 mouse_genomes_project 17 34133225 34139580 + MGP_LPJ_P0046779 Daxx protein_coding protein_coding MGP_LPJ_T0046780.1 MGP_LPJ_G0023450.1 mouse_genomes_project 17 34133278 34135293 + MGP_LPJ_P0046780 Daxx protein_coding protein_coding MGP_LPJ_T0046781.1 MGP_LPJ_G0023450.1 mouse_genomes_project 17 34133295 34139509 + MGP_LPJ_P0046781 Daxx protein_coding protein_coding MGP_LPJ_T0046782.1 MGP_LPJ_G0023450.1 mouse_genomes_project 17 34133381 34139573 + MGP_LPJ_P0046782 Daxx protein_coding protein_coding MGP_LPJ_T0046783.1 MGP_LPJ_G0023450.1 mouse_genomes_project 17 34134057 34135678 + Daxx protein_coding retained_intron MGP_LPJ_T0046784.1 MGP_LPJ_G0023450.1 mouse_genomes_project 17 34134206 34139573 + MGP_LPJ_P0046784 Daxx protein_coding protein_coding MGP_LPJ_T0046785.1 MGP_LPJ_G0023450.1 mouse_genomes_project 17 34136530 34137990 + Daxx protein_coding processed_transcript MGP_LPJ_T0046786.1 MGP_LPJ_G0023450.1 mouse_genomes_project 17 34137549 34139509 + Daxx protein_coding processed_transcript MGP_LPJ_T0010230.1 MGP_LPJ_G0008348.1 mouse_genomes_project 17 51167879 51168024 - Gm44304 miRNA miRNA MGP_LPJ_T0046000.1 MGP_LPJ_G0023262.1 mouse_genomes_project 17 24841356 24846359 + MGP_LPJ_P0046000 Tekt4 protein_coding protein_coding MGP_LPJ_T0101940.1 MGP_LPJ_G0039977.1 mouse_genomes_project 17 22267583 22268234 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0047530.1 MGP_LPJ_G0023641.1 mouse_genomes_project 17 38936961 38939207 - MGP_LPJ_P0047530 protein_coding protein_coding MGP_LPJ_T0045595.1 MGP_LPJ_G0023150.1 mouse_genomes_project 17 20661090 20667823 - MGP_LPJ_P0045595 protein_coding protein_coding MGP_LPJ_T0045843.1 MGP_LPJ_G0023226.1 mouse_genomes_project 17 24045386 24045972 - Ndufb10 protein_coding retained_intron MGP_LPJ_T0045844.1 MGP_LPJ_G0023226.1 mouse_genomes_project 17 24045386 24046229 - Ndufb10 protein_coding retained_intron MGP_LPJ_T0045845.1 MGP_LPJ_G0023226.1 mouse_genomes_project 17 24045386 24047732 - Ndufb10 protein_coding retained_intron MGP_LPJ_T0045846.1 MGP_LPJ_G0023226.1 mouse_genomes_project 17 24045386 24047790 - MGP_LPJ_P0045846 Ndufb10 protein_coding protein_coding MGP_LPJ_T0045847.1 MGP_LPJ_G0023226.1 mouse_genomes_project 17 24045727 24047724 - MGP_LPJ_P0045847 Ndufb10 protein_coding protein_coding MGP_LPJ_T0045848.1 MGP_LPJ_G0023226.1 mouse_genomes_project 17 24046004 24047706 - Ndufb10 protein_coding processed_transcript MGP_LPJ_T0045475.1 MGP_LPJ_G0023084.1 mouse_genomes_project 17 13314165 13336815 - MGP_LPJ_P0045475 Psmb1 protein_coding protein_coding MGP_LPJ_T0048486.1 MGP_LPJ_G0023968.1 mouse_genomes_project 17 83974769 83977149 + Gemin6 protein_coding processed_transcript MGP_LPJ_T0048487.1 MGP_LPJ_G0023968.1 mouse_genomes_project 17 83974769 83978828 + MGP_LPJ_P0048487 Gemin6 protein_coding protein_coding MGP_LPJ_T0017524.1 MGP_LPJ_G0015268.1 mouse_genomes_project 17 38187897 38189906 + Gm20429 processed_transcript retained_intron MGP_LPJ_T0017525.1 MGP_LPJ_G0015268.1 mouse_genomes_project 17 38189286 38202447 + Gm20429 processed_transcript antisense MGP_LPJ_T0046259.1 MGP_LPJ_G0023324.1 mouse_genomes_project 17 26642671 26666171 - MGP_LPJ_P0046259 Ip6k3 protein_coding protein_coding MGP_LPJ_T0003798.1 MGP_LPJ_G0003416.1 mouse_genomes_project 17 74015683 74038938 + Gm28727 antisense antisense MGP_LPJ_T0045476.1 MGP_LPJ_G0023085.1 mouse_genomes_project 17 13338426 13358524 + MGP_LPJ_P0045476 Tbp protein_coding protein_coding MGP_LPJ_T0045477.1 MGP_LPJ_G0023085.1 mouse_genomes_project 17 13338426 13369319 + MGP_LPJ_P0045477 Tbp protein_coding protein_coding MGP_LPJ_T0045478.1 MGP_LPJ_G0023085.1 mouse_genomes_project 17 13338426 13343194 + MGP_LPJ_P0045478 Tbp protein_coding protein_coding MGP_LPJ_T0045479.1 MGP_LPJ_G0023085.1 mouse_genomes_project 17 13338439 13346043 + MGP_LPJ_P0045479 Tbp protein_coding protein_coding MGP_LPJ_T0045480.1 MGP_LPJ_G0023085.1 mouse_genomes_project 17 13338448 13358524 + MGP_LPJ_P0045480 Tbp protein_coding protein_coding MGP_LPJ_T0045481.1 MGP_LPJ_G0023085.1 mouse_genomes_project 17 13338450 13345948 + MGP_LPJ_P0045481 Tbp protein_coding protein_coding MGP_LPJ_T0045482.1 MGP_LPJ_G0023085.1 mouse_genomes_project 17 13338460 13352971 + MGP_LPJ_P0045482 Tbp protein_coding protein_coding MGP_LPJ_T0045483.1 MGP_LPJ_G0023085.1 mouse_genomes_project 17 13338466 13343036 + MGP_LPJ_P0045483 Tbp protein_coding protein_coding MGP_LPJ_T0045484.1 MGP_LPJ_G0023085.1 mouse_genomes_project 17 13338498 13358524 + MGP_LPJ_P0045484 Tbp protein_coding protein_coding MGP_LPJ_T0045485.1 MGP_LPJ_G0023085.1 mouse_genomes_project 17 13343171 13357965 + MGP_LPJ_P0045485 Tbp protein_coding protein_coding MGP_LPJ_T0045486.1 MGP_LPJ_G0023085.1 mouse_genomes_project 17 13354081 13358032 + Tbp protein_coding retained_intron MGP_LPJ_T0013243.1 MGP_LPJ_G0011334.1 mouse_genomes_project 17 49839073 49839430 + processed_pseudogene processed_pseudogene MGP_LPJ_T0045765.1 MGP_LPJ_G0023204.1 mouse_genomes_project 17 23703199 23714176 + MGP_LPJ_P0045765 Rnps1 protein_coding protein_coding MGP_LPJ_T0045766.1 MGP_LPJ_G0023204.1 mouse_genomes_project 17 23703199 23714176 + MGP_LPJ_P0045766 Rnps1 protein_coding protein_coding MGP_LPJ_T0045767.1 MGP_LPJ_G0023204.1 mouse_genomes_project 17 23703199 23714176 + MGP_LPJ_P0045767 Rnps1 protein_coding protein_coding MGP_LPJ_T0045826.1 MGP_LPJ_G0023221.1 mouse_genomes_project 17 24010943 24013347 - MGP_LPJ_P0045826 Gfer protein_coding protein_coding MGP_LPJ_T0011440.1 MGP_LPJ_G0009558.1 mouse_genomes_project 17 33069106 33069381 - Gm25667 misc_RNA misc_RNA MGP_LPJ_T0046480.1 MGP_LPJ_G0023371.1 mouse_genomes_project 17 29142322 29163539 + MGP_LPJ_P0046480 protein_coding nonsense_mediated_decay MGP_LPJ_T0046481.1 MGP_LPJ_G0023371.1 mouse_genomes_project 17 29142340 29146468 + protein_coding processed_transcript MGP_LPJ_T0046482.1 MGP_LPJ_G0023371.1 mouse_genomes_project 17 29142350 29148405 + protein_coding retained_intron MGP_LPJ_T0046483.1 MGP_LPJ_G0023371.1 mouse_genomes_project 17 29142350 29163432 + MGP_LPJ_P0046483 protein_coding protein_coding MGP_LPJ_T0046484.1 MGP_LPJ_G0023371.1 mouse_genomes_project 17 29146845 29149360 + protein_coding retained_intron MGP_LPJ_T0046485.1 MGP_LPJ_G0023371.1 mouse_genomes_project 17 29150360 29158793 + protein_coding retained_intron MGP_LPJ_T0046486.1 MGP_LPJ_G0023371.1 mouse_genomes_project 17 29150372 29158164 + protein_coding retained_intron MGP_LPJ_T0046487.1 MGP_LPJ_G0023371.1 mouse_genomes_project 17 29160405 29162327 + protein_coding processed_transcript MGP_LPJ_T0045265.1 MGP_LPJ_G0023012.1 mouse_genomes_project 17 3342233 3379522 - MGP_LPJ_P0045265 Serac1 protein_coding protein_coding MGP_LPJ_T0045266.1 MGP_LPJ_G0023012.1 mouse_genomes_project 17 3343941 3350078 - Serac1 protein_coding processed_transcript MGP_LPJ_T0045267.1 MGP_LPJ_G0023012.1 mouse_genomes_project 17 3344103 3379508 - MGP_LPJ_P0045267 Serac1 protein_coding protein_coding MGP_LPJ_T0045268.1 MGP_LPJ_G0023012.1 mouse_genomes_project 17 3350049 3351411 - Serac1 protein_coding retained_intron MGP_LPJ_T0045269.1 MGP_LPJ_G0023012.1 mouse_genomes_project 17 3364802 3379514 - Serac1 protein_coding processed_transcript MGP_LPJ_T0017489.1 MGP_LPJ_G0015255.1 mouse_genomes_project 17 19381552 19382578 + Vmn1r227 processed_transcript pseudogene MGP_LPJ_T0006926.1 MGP_LPJ_G0005706.1 mouse_genomes_project 17 25393346 25396004 + 1700022N22Rik lincRNA lincRNA MGP_LPJ_T0001016.1 MGP_LPJ_G0000941.1 mouse_genomes_project 17 52330874 52331892 + TEC TEC MGP_LPJ_T0048592.1 MGP_LPJ_G0024013.1 mouse_genomes_project 17 91559937 91610675 - MGP_LPJ_P0048592 1700011E24Rik protein_coding protein_coding MGP_LPJ_T0048593.1 MGP_LPJ_G0024013.1 mouse_genomes_project 17 91559942 91610621 - MGP_LPJ_P0048593 1700011E24Rik protein_coding protein_coding MGP_LPJ_T0048594.1 MGP_LPJ_G0024013.1 mouse_genomes_project 17 91593427 91610642 - MGP_LPJ_P0048594 1700011E24Rik protein_coding protein_coding MGP_LPJ_T0048595.1 MGP_LPJ_G0024013.1 mouse_genomes_project 17 91599714 91610569 - 1700011E24Rik protein_coding processed_transcript MGP_LPJ_T0048596.1 MGP_LPJ_G0024013.1 mouse_genomes_project 17 91599724 91610569 - 1700011E24Rik protein_coding processed_transcript MGP_LPJ_T0006947.1 MGP_LPJ_G0005722.1 mouse_genomes_project 17 32431719 32433759 + lincRNA lincRNA MGP_LPJ_T0003765.1 MGP_LPJ_G0003390.1 mouse_genomes_project 17 35437359 35442249 - Gm10501 antisense antisense MGP_LPJ_T0047519.1 MGP_LPJ_G0023630.1 mouse_genomes_project 17 38639331 38640453 - MGP_LPJ_P0047519 protein_coding protein_coding MGP_LPJ_T0048430.1 MGP_LPJ_G0023943.1 mouse_genomes_project 17 78902298 79006995 + MGP_LPJ_P0048430 Rasgrp3 protein_coding protein_coding MGP_LPJ_T0048431.1 MGP_LPJ_G0023943.1 mouse_genomes_project 17 78938104 79006995 + MGP_LPJ_P0048431 Rasgrp3 protein_coding protein_coding MGP_LPJ_T0048607.1 MGP_LPJ_G0024017.1 mouse_genomes_project 17 91971427 92021016 - MGP_LPJ_P0048607 Kcnk12 protein_coding protein_coding MGP_LPJ_T0013226.1 MGP_LPJ_G0011317.1 mouse_genomes_project 17 37285755 37286328 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099231.1 MGP_LPJ_G0037494.1 mouse_genomes_project 17 63073471 63073634 + Gm23447 snRNA snRNA MGP_LPJ_T0046564.1 MGP_LPJ_G0023396.1 mouse_genomes_project 17 31492580 31511523 - MGP_LPJ_P0046564 Wdr4 protein_coding protein_coding MGP_LPJ_T0046565.1 MGP_LPJ_G0023396.1 mouse_genomes_project 17 31492581 31511456 - MGP_LPJ_P0046565 Wdr4 protein_coding nonsense_mediated_decay MGP_LPJ_T0046566.1 MGP_LPJ_G0023396.1 mouse_genomes_project 17 31492581 31511939 - MGP_LPJ_P0046566 Wdr4 protein_coding protein_coding MGP_LPJ_T0046567.1 MGP_LPJ_G0023396.1 mouse_genomes_project 17 31492583 31511456 - MGP_LPJ_P0046567 Wdr4 protein_coding nonsense_mediated_decay MGP_LPJ_T0046568.1 MGP_LPJ_G0023396.1 mouse_genomes_project 17 31494384 31500479 - Wdr4 protein_coding retained_intron MGP_LPJ_T0046569.1 MGP_LPJ_G0023396.1 mouse_genomes_project 17 31497706 31502765 - Wdr4 protein_coding retained_intron MGP_LPJ_T0046570.1 MGP_LPJ_G0023396.1 mouse_genomes_project 17 31502234 31509100 - Wdr4 protein_coding retained_intron MGP_LPJ_T0046571.1 MGP_LPJ_G0023396.1 mouse_genomes_project 17 31502722 31519097 - MGP_LPJ_P0046571 Wdr4 protein_coding protein_coding MGP_LPJ_T0046572.1 MGP_LPJ_G0023396.1 mouse_genomes_project 17 31502732 31511466 - MGP_LPJ_P0046572 Wdr4 protein_coding protein_coding MGP_LPJ_T0046573.1 MGP_LPJ_G0023396.1 mouse_genomes_project 17 31511630 31519157 - Wdr4 protein_coding processed_transcript MGP_LPJ_T0003763.1 MGP_LPJ_G0003388.1 mouse_genomes_project 17 34472271 34477308 - Gm20496 antisense antisense MGP_LPJ_T0048597.1 MGP_LPJ_G0024014.1 mouse_genomes_project 17 91618686 91631442 - Calm2 protein_coding retained_intron MGP_LPJ_T0048598.1 MGP_LPJ_G0024014.1 mouse_genomes_project 17 91618928 91631389 - MGP_LPJ_P0048598 Calm2 protein_coding unknown_likely_coding MGP_LPJ_T0048599.1 MGP_LPJ_G0024014.1 mouse_genomes_project 17 91619795 91631443 - Calm2 protein_coding retained_intron MGP_LPJ_T0099217.1 MGP_LPJ_G0037480.1 mouse_genomes_project 17 34184276 34184381 + Gm23111 snRNA snRNA MGP_LPJ_T0101989.1 MGP_LPJ_G0040026.1 mouse_genomes_project 17 38418515 38419072 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0047590.1 MGP_LPJ_G0023684.1 mouse_genomes_project 17 45092559 45103626 - MGP_LPJ_P0047590 Ankrd66 protein_coding protein_coding MGP_LPJ_T0010188.1 MGP_LPJ_G0008306.1 mouse_genomes_project 17 15831091 15831159 + Mir125a miRNA miRNA MGP_LPJ_T0003733.1 MGP_LPJ_G0003366.1 mouse_genomes_project 17 11456317 11457280 - Gm16049 antisense antisense MGP_LPJ_T0045539.1 MGP_LPJ_G0023108.1 mouse_genomes_project 17 17436311 17653048 + MGP_LPJ_P0045539 protein_coding protein_coding MGP_LPJ_T0048034.1 MGP_LPJ_G0023803.1 mouse_genomes_project 17 56531205 56558066 - MGP_LPJ_P0048034 Slc5a7 protein_coding protein_coding MGP_LPJ_T0048175.1 MGP_LPJ_G0023865.1 mouse_genomes_project 17 59555387 59557793 + MGP_LPJ_P0048175 Tnfsf9 protein_coding protein_coding MGP_LPJ_T0047490.1 MGP_LPJ_G0023605.1 mouse_genomes_project 17 38077415 38078463 - MGP_LPJ_P0047490 Olfr93 protein_coding protein_coding MGP_LPJ_T0047414.1 MGP_LPJ_G0023583.1 mouse_genomes_project 17 37382309 37384481 + MGP_LPJ_P0047414 H2-M11 protein_coding protein_coding MGP_LPJ_T0010183.1 MGP_LPJ_G0008301.1 mouse_genomes_project 17 4221571 4221680 - Mir692-1 miRNA miRNA MGP_LPJ_T0048664.1 MGP_LPJ_G0024030.1 mouse_genomes_project 17 99184257 99209276 - MGP_LPJ_P0048664 Mettl4 protein_coding protein_coding MGP_LPJ_T0048458.1 MGP_LPJ_G0023957.1 mouse_genomes_project 17 82646713 82722705 - MGP_LPJ_P0048458 Prkd3 protein_coding protein_coding MGP_LPJ_T0048459.1 MGP_LPJ_G0023957.1 mouse_genomes_project 17 82646713 82715104 - MGP_LPJ_P0048459 Prkd3 protein_coding protein_coding MGP_LPJ_T0048460.1 MGP_LPJ_G0023957.1 mouse_genomes_project 17 82647855 82722705 - MGP_LPJ_P0048460 Prkd3 protein_coding protein_coding MGP_LPJ_T0048461.1 MGP_LPJ_G0023957.1 mouse_genomes_project 17 82648947 82710692 - MGP_LPJ_P0048461 Prkd3 protein_coding protein_coding MGP_LPJ_T0048462.1 MGP_LPJ_G0023957.1 mouse_genomes_project 17 82669216 82684972 - Prkd3 protein_coding retained_intron MGP_LPJ_T0048463.1 MGP_LPJ_G0023957.1 mouse_genomes_project 17 82671399 82714709 - MGP_LPJ_P0048463 Prkd3 protein_coding protein_coding MGP_LPJ_T0048464.1 MGP_LPJ_G0023957.1 mouse_genomes_project 17 82671868 82710875 - Prkd3 protein_coding processed_transcript MGP_LPJ_T0048465.1 MGP_LPJ_G0023957.1 mouse_genomes_project 17 82711918 82722666 - Prkd3 protein_coding retained_intron MGP_LPJ_T0047685.1 MGP_LPJ_G0023707.1 mouse_genomes_project 17 47362709 47374868 + MGP_LPJ_P0047685 Mrpl14 protein_coding protein_coding MGP_LPJ_T0047686.1 MGP_LPJ_G0023707.1 mouse_genomes_project 17 47362744 47374551 + Mrpl14 protein_coding processed_transcript MGP_LPJ_T0047687.1 MGP_LPJ_G0023707.1 mouse_genomes_project 17 47371785 47374773 + Mrpl14 protein_coding processed_transcript MGP_LPJ_T0045237.1 MGP_LPJ_G0023005.1 mouse_genomes_project 17 761852 825338 - MGP_LPJ_P0045237 Nox3 protein_coding protein_coding MGP_LPJ_T0046192.1 MGP_LPJ_G0023305.1 mouse_genomes_project 17 25721127 25722015 - MGP_LPJ_P0046192 protein_coding protein_coding MGP_LPJ_T0047789.1 MGP_LPJ_G0023732.1 mouse_genomes_project 17 48403830 48405254 + Mrpl2 protein_coding processed_transcript MGP_LPJ_T0047790.1 MGP_LPJ_G0023732.1 mouse_genomes_project 17 48403857 48407726 + MGP_LPJ_P0047790 Mrpl2 protein_coding protein_coding MGP_LPJ_T0047791.1 MGP_LPJ_G0023732.1 mouse_genomes_project 17 48403890 48407725 + MGP_LPJ_P0047791 Mrpl2 protein_coding protein_coding MGP_LPJ_T0047792.1 MGP_LPJ_G0023732.1 mouse_genomes_project 17 48406598 48407585 + Mrpl2 protein_coding processed_transcript MGP_LPJ_T0047942.1 MGP_LPJ_G0023777.1 mouse_genomes_project 17 50275893 50288663 + MGP_LPJ_P0047942 Treml2 protein_coding protein_coding MGP_LPJ_T0006911.1 MGP_LPJ_G0005693.1 mouse_genomes_project 17 9772326 9780709 + 4732491K20Rik lincRNA lincRNA MGP_LPJ_T0099238.1 MGP_LPJ_G0037501.1 mouse_genomes_project 17 88197382 88197489 - Gm24492 snRNA snRNA MGP_LPJ_T0010245.1 MGP_LPJ_G0008363.1 mouse_genomes_project 17 95469237 95469382 + miRNA miRNA MGP_LPJ_T0045578.1 MGP_LPJ_G0023140.1 mouse_genomes_project 17 20153021 20166304 + MGP_LPJ_P0045578 Zfp54 protein_coding protein_coding MGP_LPJ_T0045579.1 MGP_LPJ_G0023140.1 mouse_genomes_project 17 20153027 20165818 + MGP_LPJ_P0045579 Zfp54 protein_coding protein_coding MGP_LPJ_T0045580.1 MGP_LPJ_G0023140.1 mouse_genomes_project 17 20153052 20164609 + MGP_LPJ_P0045580 Zfp54 protein_coding protein_coding MGP_LPJ_T0047821.1 MGP_LPJ_G0023746.1 mouse_genomes_project 17 48669303 48671146 + MGP_LPJ_P0047821 Tbcc protein_coding protein_coding MGP_LPJ_T0045416.1 MGP_LPJ_G0023065.1 mouse_genomes_project 17 10557090 11471167 + MGP_LPJ_P0045416 Sod2 protein_coding protein_coding MGP_LPJ_T0099227.1 MGP_LPJ_G0037490.1 mouse_genomes_project 17 53069969 53070086 - Gm25177 snRNA snRNA MGP_LPJ_T0017485.1 MGP_LPJ_G0015253.1 mouse_genomes_project 17 11361275 11372483 - Gm16046 processed_transcript processed_transcript MGP_LPJ_T0017486.1 MGP_LPJ_G0015253.1 mouse_genomes_project 17 11364746 11372473 - Gm16046 processed_transcript processed_transcript MGP_LPJ_T0017487.1 MGP_LPJ_G0015253.1 mouse_genomes_project 17 11365229 11372502 - Gm16046 processed_transcript processed_transcript MGP_LPJ_T0047582.1 MGP_LPJ_G0023679.1 mouse_genomes_project 17 44287742 44373572 - MGP_LPJ_P0047582 Cd2ap protein_coding protein_coding MGP_LPJ_T0013259.1 MGP_LPJ_G0011350.1 mouse_genomes_project 17 71406301 71406832 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101979.1 MGP_LPJ_G0040016.1 mouse_genomes_project 17 38190410 38191802 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0003789.1 MGP_LPJ_G0003409.1 mouse_genomes_project 17 52000300 52001544 - Gm16554 antisense antisense MGP_LPJ_T0003715.1 MGP_LPJ_G0003359.1 mouse_genomes_project 17 4223245 4229467 + antisense antisense MGP_LPJ_T0100464.1 MGP_LPJ_G0038727.1 mouse_genomes_project 17 23287350 23287479 - Gm25092 snoRNA snoRNA MGP_LPJ_T0006909.1 MGP_LPJ_G0005692.1 mouse_genomes_project 17 7698821 7703524 + 1700110C19Rik lincRNA lincRNA MGP_LPJ_T0006910.1 MGP_LPJ_G0005692.1 mouse_genomes_project 17 7698821 7703524 + 1700110C19Rik lincRNA lincRNA MGP_LPJ_T0046197.1 MGP_LPJ_G0023307.1 mouse_genomes_project 17 25945789 25948719 - MGP_LPJ_P0046197 Dusp1 protein_coding protein_coding MGP_LPJ_T0046198.1 MGP_LPJ_G0023307.1 mouse_genomes_project 17 25945790 25948674 - Dusp1 protein_coding retained_intron MGP_LPJ_T0046199.1 MGP_LPJ_G0023307.1 mouse_genomes_project 17 25946715 25947923 - Dusp1 protein_coding retained_intron MGP_LPJ_T0099208.1 MGP_LPJ_G0037471.1 mouse_genomes_project 17 12589467 12589531 - Gm23352 snRNA snRNA MGP_LPJ_T0048176.1 MGP_LPJ_G0023866.1 mouse_genomes_project 17 59596491 59600272 - MGP_LPJ_P0048176 Cd70 protein_coding protein_coding MGP_LPJ_T0046700.1 MGP_LPJ_G0023437.1 mouse_genomes_project 17 33630462 33631835 + MGP_LPJ_P0046700 Actl9 protein_coding protein_coding MGP_LPJ_T0006990.1 MGP_LPJ_G0005752.1 mouse_genomes_project 17 73895881 73906062 - 5031415H12Rik lincRNA lincRNA MGP_LPJ_T0047950.1 MGP_LPJ_G0023780.1 mouse_genomes_project 17 50348528 50355778 + MGP_LPJ_P0047950 Treml1 protein_coding protein_coding MGP_LPJ_T0047951.1 MGP_LPJ_G0023780.1 mouse_genomes_project 17 50348549 50355520 + MGP_LPJ_P0047951 Treml1 protein_coding unknown_likely_coding MGP_LPJ_T0101956.1 MGP_LPJ_G0039993.1 mouse_genomes_project 17 35791608 35793720 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0006917.1 MGP_LPJ_G0005699.1 mouse_genomes_project 17 20219630 20223332 - Gm26753 lincRNA lincRNA MGP_LPJ_T0048549.1 MGP_LPJ_G0023996.1 mouse_genomes_project 17 89011062 89048482 + MGP_LPJ_P0048549 Slc3a1 protein_coding protein_coding MGP_LPJ_T0047646.1 MGP_LPJ_G0023703.1 mouse_genomes_project 17 47250264 47266110 - MGP_LPJ_P0047646 Slc29a1 protein_coding protein_coding MGP_LPJ_T0047647.1 MGP_LPJ_G0023703.1 mouse_genomes_project 17 47250264 47257639 - MGP_LPJ_P0047647 Slc29a1 protein_coding protein_coding MGP_LPJ_T0047648.1 MGP_LPJ_G0023703.1 mouse_genomes_project 17 47250266 47258704 - MGP_LPJ_P0047648 Slc29a1 protein_coding protein_coding MGP_LPJ_T0047649.1 MGP_LPJ_G0023703.1 mouse_genomes_project 17 47250267 47260967 - MGP_LPJ_P0047649 Slc29a1 protein_coding protein_coding MGP_LPJ_T0047650.1 MGP_LPJ_G0023703.1 mouse_genomes_project 17 47250267 47260636 - MGP_LPJ_P0047650 Slc29a1 protein_coding protein_coding MGP_LPJ_T0047651.1 MGP_LPJ_G0023703.1 mouse_genomes_project 17 47250267 47260634 - MGP_LPJ_P0047651 Slc29a1 protein_coding protein_coding MGP_LPJ_T0047652.1 MGP_LPJ_G0023703.1 mouse_genomes_project 17 47250606 47257561 - MGP_LPJ_P0047652 Slc29a1 protein_coding protein_coding MGP_LPJ_T0047653.1 MGP_LPJ_G0023703.1 mouse_genomes_project 17 47250735 47257326 - MGP_LPJ_P0047653 Slc29a1 protein_coding protein_coding MGP_LPJ_T0047654.1 MGP_LPJ_G0023703.1 mouse_genomes_project 17 47251282 47253805 - Slc29a1 protein_coding processed_transcript MGP_LPJ_T0047655.1 MGP_LPJ_G0023703.1 mouse_genomes_project 17 47253429 47260566 - MGP_LPJ_P0047655 Slc29a1 protein_coding protein_coding MGP_LPJ_T0047656.1 MGP_LPJ_G0023703.1 mouse_genomes_project 17 47253430 47260666 - MGP_LPJ_P0047656 Slc29a1 protein_coding protein_coding MGP_LPJ_T0047657.1 MGP_LPJ_G0023703.1 mouse_genomes_project 17 47253583 47257904 - Slc29a1 protein_coding retained_intron MGP_LPJ_T0047658.1 MGP_LPJ_G0023703.1 mouse_genomes_project 17 47253931 47255175 - Slc29a1 protein_coding retained_intron MGP_LPJ_T0047659.1 MGP_LPJ_G0023703.1 mouse_genomes_project 17 47254270 47260615 - Slc29a1 protein_coding retained_intron MGP_LPJ_T0047660.1 MGP_LPJ_G0023703.1 mouse_genomes_project 17 47254480 47260579 - Slc29a1 protein_coding retained_intron MGP_LPJ_T0047661.1 MGP_LPJ_G0023703.1 mouse_genomes_project 17 47254480 47266111 - MGP_LPJ_P0047661 Slc29a1 protein_coding protein_coding MGP_LPJ_T0047662.1 MGP_LPJ_G0023703.1 mouse_genomes_project 17 47254580 47260916 - MGP_LPJ_P0047662 Slc29a1 protein_coding protein_coding MGP_LPJ_T0047663.1 MGP_LPJ_G0023703.1 mouse_genomes_project 17 47254586 47258698 - MGP_LPJ_P0047663 Slc29a1 protein_coding protein_coding MGP_LPJ_T0047664.1 MGP_LPJ_G0023703.1 mouse_genomes_project 17 47254760 47266113 - MGP_LPJ_P0047664 Slc29a1 protein_coding protein_coding MGP_LPJ_T0047665.1 MGP_LPJ_G0023703.1 mouse_genomes_project 17 47254785 47260620 - MGP_LPJ_P0047665 Slc29a1 protein_coding protein_coding MGP_LPJ_T0047666.1 MGP_LPJ_G0023703.1 mouse_genomes_project 17 47254835 47260566 - MGP_LPJ_P0047666 Slc29a1 protein_coding protein_coding MGP_LPJ_T0047667.1 MGP_LPJ_G0023703.1 mouse_genomes_project 17 47255020 47260605 - MGP_LPJ_P0047667 Slc29a1 protein_coding protein_coding MGP_LPJ_T0047668.1 MGP_LPJ_G0023703.1 mouse_genomes_project 17 47255086 47260607 - MGP_LPJ_P0047668 Slc29a1 protein_coding protein_coding MGP_LPJ_T0047669.1 MGP_LPJ_G0023703.1 mouse_genomes_project 17 47255132 47261021 - MGP_LPJ_P0047669 Slc29a1 protein_coding protein_coding MGP_LPJ_T0047670.1 MGP_LPJ_G0023703.1 mouse_genomes_project 17 47255175 47262133 - MGP_LPJ_P0047670 Slc29a1 protein_coding protein_coding MGP_LPJ_T0046265.1 MGP_LPJ_G0023327.1 mouse_genomes_project 17 27127834 27138350 + MGP_LPJ_P0046265 protein_coding protein_coding MGP_LPJ_T0046266.1 MGP_LPJ_G0023327.1 mouse_genomes_project 17 27127857 27138348 + MGP_LPJ_P0046266 protein_coding protein_coding MGP_LPJ_T0046267.1 MGP_LPJ_G0023327.1 mouse_genomes_project 17 27127902 27138343 + MGP_LPJ_P0046267 protein_coding protein_coding MGP_LPJ_T0101943.1 MGP_LPJ_G0039980.1 mouse_genomes_project 17 33064276 33071192 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0048508.1 MGP_LPJ_G0023982.1 mouse_genomes_project 17 87010405 87021667 + MGP_LPJ_P0048508 Pkdcc protein_coding protein_coding MGP_LPJ_T0048509.1 MGP_LPJ_G0023982.1 mouse_genomes_project 17 87015215 87016852 + Pkdcc protein_coding processed_transcript MGP_LPJ_T0048510.1 MGP_LPJ_G0023982.1 mouse_genomes_project 17 87015215 87020861 + MGP_LPJ_P0048510 Pkdcc protein_coding protein_coding MGP_LPJ_T0048511.1 MGP_LPJ_G0023982.1 mouse_genomes_project 17 87016144 87021172 + Pkdcc protein_coding processed_transcript MGP_LPJ_T0006920.1 MGP_LPJ_G0005702.1 mouse_genomes_project 17 22712353 22713898 + Gm26695 lincRNA lincRNA MGP_LPJ_T0011444.1 MGP_LPJ_G0009562.1 mouse_genomes_project 17 45542481 45542767 - Gm24532 misc_RNA misc_RNA MGP_LPJ_T0098008.1 MGP_LPJ_G0036289.1 mouse_genomes_project 17 84516320 84516712 + pseudogene pseudogene MGP_LPJ_T0047872.1 MGP_LPJ_G0023760.1 mouse_genomes_project 17 49466161 49510898 + protein_coding retained_intron MGP_LPJ_T0047873.1 MGP_LPJ_G0023760.1 mouse_genomes_project 17 49466170 49512222 + protein_coding retained_intron MGP_LPJ_T0047875.1 MGP_LPJ_G0023760.1 mouse_genomes_project 17 49466185 49548005 + MGP_LPJ_P0047875 protein_coding nonsense_mediated_decay MGP_LPJ_T0013225.1 MGP_LPJ_G0011316.1 mouse_genomes_project 17 37015844 37016114 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017481.1 MGP_LPJ_G0015251.1 mouse_genomes_project 17 5666353 5722835 + T2 processed_transcript processed_transcript MGP_LPJ_T0017482.1 MGP_LPJ_G0015251.1 mouse_genomes_project 17 5696215 5722835 + T2 processed_transcript processed_transcript MGP_LPJ_T0046503.1 MGP_LPJ_G0023378.1 mouse_genomes_project 17 29470653 29514743 + MGP_LPJ_P0046503 Cmtr1 protein_coding protein_coding MGP_LPJ_T0046504.1 MGP_LPJ_G0023378.1 mouse_genomes_project 17 29470823 29484334 + MGP_LPJ_P0046504 Cmtr1 protein_coding protein_coding MGP_LPJ_T0046505.1 MGP_LPJ_G0023378.1 mouse_genomes_project 17 29489307 29492212 + MGP_LPJ_P0046505 Cmtr1 protein_coding protein_coding MGP_LPJ_T0046506.1 MGP_LPJ_G0023378.1 mouse_genomes_project 17 29490492 29499173 + Cmtr1 protein_coding processed_transcript MGP_LPJ_T0046507.1 MGP_LPJ_G0023378.1 mouse_genomes_project 17 29491222 29495975 + Cmtr1 protein_coding processed_transcript MGP_LPJ_T0046508.1 MGP_LPJ_G0023378.1 mouse_genomes_project 17 29499074 29512130 + Cmtr1 protein_coding retained_intron MGP_LPJ_T0003803.1 MGP_LPJ_G0003421.1 mouse_genomes_project 17 91527426 91529648 - 0610012D04Rik antisense antisense MGP_LPJ_T0099218.1 MGP_LPJ_G0037481.1 mouse_genomes_project 17 35511996 35512100 + Gm23421 snRNA snRNA MGP_LPJ_T0007007.1 MGP_LPJ_G0005765.1 mouse_genomes_project 17 92405623 92420785 - Gm26612 lincRNA lincRNA MGP_LPJ_T0099216.1 MGP_LPJ_G0037479.1 mouse_genomes_project 17 33936808 33936884 + Gm22943 snRNA snRNA MGP_LPJ_T0047965.1 MGP_LPJ_G0023782.1 mouse_genomes_project 17 50406593 50414637 + MGP_LPJ_P0047965 Oard1 protein_coding protein_coding MGP_LPJ_T0047966.1 MGP_LPJ_G0023782.1 mouse_genomes_project 17 50406659 50414649 + MGP_LPJ_P0047966 Oard1 protein_coding protein_coding MGP_LPJ_T0047869.1 MGP_LPJ_G0023758.1 mouse_genomes_project 17 49453963 49466065 - MGP_LPJ_P0047869 Bysl protein_coding protein_coding MGP_LPJ_T0046540.1 MGP_LPJ_G0023391.1 mouse_genomes_project 17 31140421 31158973 - MGP_LPJ_P0046540 Tmprss3 protein_coding protein_coding MGP_LPJ_T0046541.1 MGP_LPJ_G0023391.1 mouse_genomes_project 17 31140421 31160180 - MGP_LPJ_P0046541 Tmprss3 protein_coding protein_coding MGP_LPJ_T0001010.1 MGP_LPJ_G0000936.1 mouse_genomes_project 17 8670136 8675136 + TEC TEC MGP_LPJ_T0048358.1 MGP_LPJ_G0023919.1 mouse_genomes_project 17 74749733 74776339 + MGP_LPJ_P0048358 Spdya protein_coding protein_coding MGP_LPJ_T0048359.1 MGP_LPJ_G0023919.1 mouse_genomes_project 17 74749733 74787142 + MGP_LPJ_P0048359 Spdya protein_coding protein_coding MGP_LPJ_T0048360.1 MGP_LPJ_G0023919.1 mouse_genomes_project 17 74749744 74787142 + MGP_LPJ_P0048360 Spdya protein_coding protein_coding MGP_LPJ_T0048361.1 MGP_LPJ_G0023919.1 mouse_genomes_project 17 74753939 74786283 + MGP_LPJ_P0048361 Spdya protein_coding protein_coding MGP_LPJ_T0045822.1 MGP_LPJ_G0023218.1 mouse_genomes_project 17 23967977 23969114 - MGP_LPJ_P0045822 Npw protein_coding protein_coding MGP_LPJ_T0046130.1 MGP_LPJ_G0023290.1 mouse_genomes_project 17 25350054 25356189 - MGP_LPJ_P0046130 A930017K11Rik protein_coding protein_coding MGP_LPJ_T0045778.1 MGP_LPJ_G0023208.1 mouse_genomes_project 17 23768303 23769422 + MGP_LPJ_P0045778 Pgp protein_coding protein_coding MGP_LPJ_T0046147.1 MGP_LPJ_G0023296.1 mouse_genomes_project 17 25532968 25542734 + MGP_LPJ_P0046147 Tmem8 protein_coding protein_coding MGP_LPJ_T0046148.1 MGP_LPJ_G0023296.1 mouse_genomes_project 17 25538921 25542734 + MGP_LPJ_P0046148 Tmem8 protein_coding protein_coding MGP_LPJ_T0045547.1 MGP_LPJ_G0023116.1 mouse_genomes_project 17 18812909 18844313 - MGP_LPJ_P0045547 Vmn2r105 protein_coding protein_coding MGP_LPJ_T0045424.1 MGP_LPJ_G0023071.1 mouse_genomes_project 17 11163224 11164827 + MGP_LPJ_P0045424 protein_coding protein_coding MGP_LPJ_T0046912.1 MGP_LPJ_G0023475.1 mouse_genomes_project 17 34483000 34486148 - MGP_LPJ_P0046912 Gm15821 protein_coding protein_coding MGP_LPJ_T0101965.1 MGP_LPJ_G0040002.1 mouse_genomes_project 17 37000207 37000313 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0047150.1 MGP_LPJ_G0023525.1 mouse_genomes_project 17 35545964 35552608 - MGP_LPJ_P0047150 Ly6g6f protein_coding protein_coding MGP_LPJ_T0047462.1 MGP_LPJ_G0023600.1 mouse_genomes_project 17 37892975 37902321 + MGP_LPJ_P0047462 Zfp57 protein_coding protein_coding MGP_LPJ_T0047463.1 MGP_LPJ_G0023600.1 mouse_genomes_project 17 37894185 37901131 + MGP_LPJ_P0047463 Zfp57 protein_coding protein_coding MGP_LPJ_T0047464.1 MGP_LPJ_G0023600.1 mouse_genomes_project 17 37894228 37902321 + MGP_LPJ_P0047464 Zfp57 protein_coding protein_coding MGP_LPJ_T0047465.1 MGP_LPJ_G0023600.1 mouse_genomes_project 17 37894257 37897772 + MGP_LPJ_P0047465 Zfp57 protein_coding protein_coding MGP_LPJ_T0047466.1 MGP_LPJ_G0023600.1 mouse_genomes_project 17 37894272 37895526 + Zfp57 protein_coding retained_intron MGP_LPJ_T0047467.1 MGP_LPJ_G0023600.1 mouse_genomes_project 17 37894280 37895404 + Zfp57 protein_coding retained_intron MGP_LPJ_T0047468.1 MGP_LPJ_G0023600.1 mouse_genomes_project 17 37894299 37901512 + MGP_LPJ_P0047468 Zfp57 protein_coding protein_coding MGP_LPJ_T0047469.1 MGP_LPJ_G0023600.1 mouse_genomes_project 17 37894315 37897757 + MGP_LPJ_P0047469 Zfp57 protein_coding protein_coding MGP_LPJ_T0047470.1 MGP_LPJ_G0023600.1 mouse_genomes_project 17 37894373 37901435 + MGP_LPJ_P0047470 Zfp57 protein_coding protein_coding MGP_LPJ_T0047471.1 MGP_LPJ_G0023600.1 mouse_genomes_project 17 37894741 37902324 + MGP_LPJ_P0047471 Zfp57 protein_coding protein_coding MGP_LPJ_T0047472.1 MGP_LPJ_G0023600.1 mouse_genomes_project 17 37895369 37902321 + MGP_LPJ_P0047472 Zfp57 protein_coding protein_coding MGP_LPJ_T0047473.1 MGP_LPJ_G0023600.1 mouse_genomes_project 17 37896233 37901404 + MGP_LPJ_P0047473 Zfp57 protein_coding protein_coding MGP_LPJ_T0047474.1 MGP_LPJ_G0023600.1 mouse_genomes_project 17 37896314 37897939 + Zfp57 protein_coding retained_intron MGP_LPJ_T0017549.1 MGP_LPJ_G0015273.1 mouse_genomes_project 17 95223585 95229527 + 4930480K15Rik processed_transcript processed_transcript MGP_LPJ_T0045815.1 MGP_LPJ_G0023214.1 mouse_genomes_project 17 23852734 23905940 + MGP_LPJ_P0045815 Pkd1 protein_coding protein_coding MGP_LPJ_T0045816.1 MGP_LPJ_G0023214.1 mouse_genomes_project 17 23853049 23905915 + MGP_LPJ_P0045816 Pkd1 protein_coding unknown_likely_coding MGP_LPJ_T0047700.1 MGP_LPJ_G0023710.1 mouse_genomes_project 17 47813389 47837509 + MGP_LPJ_P0047700 Mrps18a protein_coding protein_coding MGP_LPJ_T0047701.1 MGP_LPJ_G0023710.1 mouse_genomes_project 17 47813398 47831726 + Mrps18a protein_coding retained_intron MGP_LPJ_T0047702.1 MGP_LPJ_G0023710.1 mouse_genomes_project 17 47813399 47834464 + MGP_LPJ_P0047702 Mrps18a protein_coding protein_coding MGP_LPJ_T0047704.1 MGP_LPJ_G0023710.1 mouse_genomes_project 17 47831401 47837469 + Mrps18a protein_coding processed_transcript MGP_LPJ_T0047705.1 MGP_LPJ_G0023710.1 mouse_genomes_project 17 47833873 47836322 + Mrps18a protein_coding retained_intron MGP_LPJ_T0047706.1 MGP_LPJ_G0023710.1 mouse_genomes_project 17 47834056 47837392 + Mrps18a protein_coding retained_intron MGP_LPJ_T0047211.1 MGP_LPJ_G0023538.1 mouse_genomes_project 17 35677967 35680594 - MGP_LPJ_P0047211 Tnf protein_coding protein_coding MGP_LPJ_T0047212.1 MGP_LPJ_G0023538.1 mouse_genomes_project 17 35678093 35680591 - MGP_LPJ_P0047212 Tnf protein_coding protein_coding MGP_LPJ_T0101963.1 MGP_LPJ_G0040000.1 mouse_genomes_project 17 36869898 36912511 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0046693.1 MGP_LPJ_G0023434.1 mouse_genomes_project 17 33467633 33468588 + MGP_LPJ_P0046693 Olfr63 protein_coding protein_coding MGP_LPJ_T0101508.1 MGP_LPJ_G0039641.1 mouse_genomes_project 17 99209483 99242736 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101509.1 MGP_LPJ_G0039641.1 mouse_genomes_project 17 99209495 99217390 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101510.1 MGP_LPJ_G0039641.1 mouse_genomes_project 17 99209521 99242739 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101511.1 MGP_LPJ_G0039641.1 mouse_genomes_project 17 99211878 99242633 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0046690.1 MGP_LPJ_G0023431.1 mouse_genomes_project 17 33372825 33373916 - MGP_LPJ_P0046690 protein_coding protein_coding MGP_LPJ_T0010190.1 MGP_LPJ_G0008308.1 mouse_genomes_project 17 23015569 23015648 + Mir5125 miRNA miRNA MGP_LPJ_T0013195.1 MGP_LPJ_G0011286.1 mouse_genomes_project 17 3121241 3121539 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006935.1 MGP_LPJ_G0005714.1 mouse_genomes_project 17 28761585 28765151 - lincRNA lincRNA MGP_LPJ_T0046597.1 MGP_LPJ_G0023402.1 mouse_genomes_project 17 31863455 31874793 - MGP_LPJ_P0046597 Sik1 protein_coding protein_coding MGP_LPJ_T0048467.1 MGP_LPJ_G0023959.1 mouse_genomes_project 17 83036594 83057788 - MGP_LPJ_P0048467 Cdc42ep3 protein_coding protein_coding MGP_LPJ_T0013246.1 MGP_LPJ_G0011337.1 mouse_genomes_project 17 55767856 55768623 - processed_pseudogene processed_pseudogene MGP_LPJ_T0046509.1 MGP_LPJ_G0023379.1 mouse_genomes_project 17 29506345 29525756 - MGP_LPJ_P0046509 Ccdc167 protein_coding nonsense_mediated_decay MGP_LPJ_T0046510.1 MGP_LPJ_G0023379.1 mouse_genomes_project 17 29507091 29525780 - MGP_LPJ_P0046510 Ccdc167 protein_coding protein_coding MGP_LPJ_T0046511.1 MGP_LPJ_G0023379.1 mouse_genomes_project 17 29508769 29525734 - MGP_LPJ_P0046511 Ccdc167 protein_coding nonsense_mediated_decay MGP_LPJ_T0046512.1 MGP_LPJ_G0023379.1 mouse_genomes_project 17 29512102 29525783 - MGP_LPJ_P0046512 Ccdc167 protein_coding protein_coding MGP_LPJ_T0046513.1 MGP_LPJ_G0023379.1 mouse_genomes_project 17 29521743 29525735 - Ccdc167 protein_coding processed_transcript MGP_LPJ_T0046594.1 MGP_LPJ_G0023400.1 mouse_genomes_project 17 31665497 31677066 - MGP_LPJ_P0046594 U2af1 protein_coding protein_coding MGP_LPJ_T0046595.1 MGP_LPJ_G0023400.1 mouse_genomes_project 17 31665497 31677066 - MGP_LPJ_P0046595 U2af1 protein_coding protein_coding MGP_LPJ_T0101946.1 MGP_LPJ_G0039983.1 mouse_genomes_project 17 34187404 36701610 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0047310.1 MGP_LPJ_G0023562.1 mouse_genomes_project 17 36409114 36413503 - MGP_LPJ_P0047310 Tubb5 protein_coding protein_coding MGP_LPJ_T0047311.1 MGP_LPJ_G0023562.1 mouse_genomes_project 17 36410795 36412251 - Tubb5 protein_coding retained_intron MGP_LPJ_T0047312.1 MGP_LPJ_G0023562.1 mouse_genomes_project 17 36411091 36413405 - MGP_LPJ_P0047312 Tubb5 protein_coding protein_coding MGP_LPJ_T0047313.1 MGP_LPJ_G0023562.1 mouse_genomes_project 17 36411437 36413414 - Tubb5 protein_coding retained_intron MGP_LPJ_T0046652.1 MGP_LPJ_G0023415.1 mouse_genomes_project 17 32612925 32615166 + protein_coding retained_intron MGP_LPJ_T0013250.1 MGP_LPJ_G0011341.1 mouse_genomes_project 17 56179065 56179449 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101937.1 MGP_LPJ_G0039974.1 mouse_genomes_project 17 19959130 19959590 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0003732.1 MGP_LPJ_G0003365.1 mouse_genomes_project 17 11456281 11456897 - Gm16052 antisense antisense MGP_LPJ_T0010204.1 MGP_LPJ_G0008322.1 mouse_genomes_project 17 26847082 26847143 - Mir7214 miRNA miRNA MGP_LPJ_T0047113.1 MGP_LPJ_G0023516.1 mouse_genomes_project 17 35476910 35488265 + MGP_LPJ_P0047113 Vwa7 protein_coding protein_coding MGP_LPJ_T0047114.1 MGP_LPJ_G0023516.1 mouse_genomes_project 17 35476969 35488044 + MGP_LPJ_P0047114 Vwa7 protein_coding protein_coding MGP_LPJ_T0011435.1 MGP_LPJ_G0009553.1 mouse_genomes_project 17 10255447 10255699 + Gm23833 misc_RNA misc_RNA MGP_LPJ_T0101950.1 MGP_LPJ_G0039987.1 mouse_genomes_project 17 34802220 34802725 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0013218.1 MGP_LPJ_G0011309.1 mouse_genomes_project 17 34673692 34673980 + processed_pseudogene processed_pseudogene MGP_LPJ_T0045558.1 MGP_LPJ_G0023127.1 mouse_genomes_project 17 19413307 19414750 - MGP_LPJ_P0045558 Vmn1r228 protein_coding protein_coding MGP_LPJ_T0048610.1 MGP_LPJ_G0024020.1 mouse_genomes_project 17 92240254 92318559 - MGP_LPJ_P0048610 Fbxo11 protein_coding protein_coding MGP_LPJ_T0048611.1 MGP_LPJ_G0024020.1 mouse_genomes_project 17 92240302 92278790 - MGP_LPJ_P0048611 Fbxo11 protein_coding protein_coding MGP_LPJ_T0048612.1 MGP_LPJ_G0024020.1 mouse_genomes_project 17 92240813 92259991 - MGP_LPJ_P0048612 Fbxo11 protein_coding nonsense_mediated_decay MGP_LPJ_T0048613.1 MGP_LPJ_G0024020.1 mouse_genomes_project 17 92242608 92250376 - Fbxo11 protein_coding retained_intron MGP_LPJ_T0046026.1 MGP_LPJ_G0023269.1 mouse_genomes_project 17 25124206 25138751 + MGP_LPJ_P0046026 Mslnl protein_coding protein_coding MGP_LPJ_T0048022.1 MGP_LPJ_G0023799.1 mouse_genomes_project 17 55847513 55902327 + Kat2b protein_coding processed_transcript MGP_LPJ_T0048023.1 MGP_LPJ_G0023799.1 mouse_genomes_project 17 55847623 55949758 + MGP_LPJ_P0048023 Kat2b protein_coding protein_coding MGP_LPJ_T0048024.1 MGP_LPJ_G0023799.1 mouse_genomes_project 17 55865636 55915064 + MGP_LPJ_P0048024 Kat2b protein_coding protein_coding MGP_LPJ_T0048025.1 MGP_LPJ_G0023799.1 mouse_genomes_project 17 55921684 55949109 + MGP_LPJ_P0048025 Kat2b protein_coding protein_coding MGP_LPJ_T0048026.1 MGP_LPJ_G0023799.1 mouse_genomes_project 17 55936277 55940686 + Kat2b protein_coding retained_intron MGP_LPJ_T0048027.1 MGP_LPJ_G0023799.1 mouse_genomes_project 17 55936350 55940711 + Kat2b protein_coding retained_intron MGP_LPJ_T0048028.1 MGP_LPJ_G0023799.1 mouse_genomes_project 17 55936434 55947724 + MGP_LPJ_P0048028 Kat2b protein_coding nonsense_mediated_decay MGP_LPJ_T0046201.1 MGP_LPJ_G0023309.1 mouse_genomes_project 17 26014959 26110827 + MGP_LPJ_P0046201 Ergic1 protein_coding protein_coding MGP_LPJ_T0046202.1 MGP_LPJ_G0023309.1 mouse_genomes_project 17 26014988 26022471 + Ergic1 protein_coding processed_transcript MGP_LPJ_T0046203.1 MGP_LPJ_G0023309.1 mouse_genomes_project 17 26015015 26109070 + Ergic1 protein_coding processed_transcript MGP_LPJ_T0046204.1 MGP_LPJ_G0023309.1 mouse_genomes_project 17 26068470 26088334 + MGP_LPJ_P0046204 Ergic1 protein_coding nonsense_mediated_decay MGP_LPJ_T0046205.1 MGP_LPJ_G0023309.1 mouse_genomes_project 17 26075350 26109070 + Ergic1 protein_coding processed_transcript MGP_LPJ_T0046206.1 MGP_LPJ_G0023309.1 mouse_genomes_project 17 26078072 26097777 + Ergic1 protein_coding retained_intron MGP_LPJ_T0046207.1 MGP_LPJ_G0023309.1 mouse_genomes_project 17 26092641 26109248 + MGP_LPJ_P0046207 Ergic1 protein_coding protein_coding MGP_LPJ_T0046735.1 MGP_LPJ_G0023443.1 mouse_genomes_project 17 33890151 33924411 - MGP_LPJ_P0046735 March2 protein_coding nonsense_mediated_decay MGP_LPJ_T0046736.1 MGP_LPJ_G0023443.1 mouse_genomes_project 17 33890171 33924386 - MGP_LPJ_P0046736 March2 protein_coding protein_coding MGP_LPJ_T0046737.1 MGP_LPJ_G0023443.1 mouse_genomes_project 17 33890272 33924386 - MGP_LPJ_P0046737 March2 protein_coding protein_coding MGP_LPJ_T0046738.1 MGP_LPJ_G0023443.1 mouse_genomes_project 17 33897122 33924394 - MGP_LPJ_P0046738 March2 protein_coding protein_coding MGP_LPJ_T0046739.1 MGP_LPJ_G0023443.1 mouse_genomes_project 17 33897122 33924381 - MGP_LPJ_P0046739 March2 protein_coding protein_coding MGP_LPJ_T0046740.1 MGP_LPJ_G0023443.1 mouse_genomes_project 17 33897446 33909015 - MGP_LPJ_P0046740 March2 protein_coding protein_coding MGP_LPJ_T0046741.1 MGP_LPJ_G0023443.1 mouse_genomes_project 17 33899824 33924398 - MGP_LPJ_P0046741 March2 protein_coding protein_coding MGP_LPJ_T0046742.1 MGP_LPJ_G0023443.1 mouse_genomes_project 17 33901633 33924332 - MGP_LPJ_P0046742 March2 protein_coding protein_coding MGP_LPJ_T0046743.1 MGP_LPJ_G0023443.1 mouse_genomes_project 17 33908952 33919141 - MGP_LPJ_P0046743 March2 protein_coding protein_coding MGP_LPJ_T0046028.1 MGP_LPJ_G0023271.1 mouse_genomes_project 17 25166847 25176614 + MGP_LPJ_P0046028 Narfl protein_coding protein_coding MGP_LPJ_T0046029.1 MGP_LPJ_G0023271.1 mouse_genomes_project 17 25166847 25177155 + MGP_LPJ_P0046029 Narfl protein_coding protein_coding MGP_LPJ_T0046030.1 MGP_LPJ_G0023271.1 mouse_genomes_project 17 25166878 25168297 + Narfl protein_coding retained_intron MGP_LPJ_T0046031.1 MGP_LPJ_G0023271.1 mouse_genomes_project 17 25166888 25173336 + MGP_LPJ_P0046031 Narfl protein_coding nonsense_mediated_decay MGP_LPJ_T0046032.1 MGP_LPJ_G0023271.1 mouse_genomes_project 17 25166890 25176619 + Narfl protein_coding retained_intron MGP_LPJ_T0046033.1 MGP_LPJ_G0023271.1 mouse_genomes_project 17 25170615 25173416 + Narfl protein_coding retained_intron MGP_LPJ_T0048142.1 MGP_LPJ_G0023847.1 mouse_genomes_project 17 59171601 59179141 + MGP_LPJ_P0048142 Dus3l protein_coding protein_coding MGP_LPJ_T0047637.1 MGP_LPJ_G0023701.1 mouse_genomes_project 17 47229230 47232847 + MGP_LPJ_P0047637 Slc35b2 protein_coding protein_coding MGP_LPJ_T0045236.1 MGP_LPJ_G0023004.1 mouse_genomes_project 17 654873 655533 + MGP_LPJ_P0045236 Cldn20 protein_coding protein_coding MGP_LPJ_T0046816.1 MGP_LPJ_G0023457.1 mouse_genomes_project 17 34176612 34177303 - Rps18 protein_coding retained_intron MGP_LPJ_T0046817.1 MGP_LPJ_G0023457.1 mouse_genomes_project 17 34176612 34179826 - Rps18 protein_coding processed_transcript MGP_LPJ_T0046818.1 MGP_LPJ_G0023457.1 mouse_genomes_project 17 34176612 34180277 - MGP_LPJ_P0046818 Rps18 protein_coding protein_coding MGP_LPJ_T0046819.1 MGP_LPJ_G0023457.1 mouse_genomes_project 17 34176612 34180331 - MGP_LPJ_P0046819 Rps18 protein_coding protein_coding MGP_LPJ_T0046820.1 MGP_LPJ_G0023457.1 mouse_genomes_project 17 34176613 34180274 - Rps18 protein_coding retained_intron MGP_LPJ_T0046821.1 MGP_LPJ_G0023457.1 mouse_genomes_project 17 34176613 34179104 - Rps18 protein_coding processed_transcript MGP_LPJ_T0046822.1 MGP_LPJ_G0023457.1 mouse_genomes_project 17 34176617 34177155 - Rps18 protein_coding retained_intron MGP_LPJ_T0046823.1 MGP_LPJ_G0023457.1 mouse_genomes_project 17 34176882 34180267 - Rps18 protein_coding retained_intron MGP_LPJ_T0046824.1 MGP_LPJ_G0023457.1 mouse_genomes_project 17 34179438 34180274 - Rps18 protein_coding retained_intron MGP_LPJ_T0046825.1 MGP_LPJ_G0023457.1 mouse_genomes_project 17 34180132 34180615 - Rps18 protein_coding processed_transcript MGP_LPJ_T0047703.1 MGP_LPJ_G0023711.1 mouse_genomes_project 17 47824633 47845397 - MGP_LPJ_P0047703 Rsph9 protein_coding protein_coding MGP_LPJ_T0047707.1 MGP_LPJ_G0023711.1 mouse_genomes_project 17 47837869 47852775 - MGP_LPJ_P0047707 Rsph9 protein_coding protein_coding MGP_LPJ_T0047708.1 MGP_LPJ_G0023711.1 mouse_genomes_project 17 47843070 47845362 - Rsph9 protein_coding retained_intron MGP_LPJ_T0010226.1 MGP_LPJ_G0008344.1 mouse_genomes_project 17 36552331 36552416 - Mir877 miRNA miRNA MGP_LPJ_T0045462.1 MGP_LPJ_G0023079.1 mouse_genomes_project 17 12766758 12781674 - MGP_LPJ_P0045462 protein_coding protein_coding MGP_LPJ_T0045463.1 MGP_LPJ_G0023079.1 mouse_genomes_project 17 12766762 12781652 - MGP_LPJ_P0045463 protein_coding protein_coding MGP_LPJ_T0047560.1 MGP_LPJ_G0023665.1 mouse_genomes_project 17 41989596 42007579 + MGP_LPJ_P0047560 Gm44501 protein_coding protein_coding MGP_LPJ_T0100485.1 MGP_LPJ_G0038748.1 mouse_genomes_project 17 76485521 76485626 + Gm25406 snoRNA snoRNA MGP_LPJ_T0048624.1 MGP_LPJ_G0024023.1 mouse_genomes_project 17 92889964 92929067 + MGP_LPJ_P0048624 Ston1 protein_coding protein_coding MGP_LPJ_T0048625.1 MGP_LPJ_G0024023.1 mouse_genomes_project 17 92889976 92937677 + Ston1 protein_coding processed_transcript MGP_LPJ_T0048626.1 MGP_LPJ_G0024023.1 mouse_genomes_project 17 92918569 92938079 + MGP_LPJ_P0048626 Ston1 protein_coding protein_coding MGP_LPJ_T0048627.1 MGP_LPJ_G0024023.1 mouse_genomes_project 17 92918569 92942019 + MGP_LPJ_P0048627 Ston1 protein_coding protein_coding MGP_LPJ_T0048628.1 MGP_LPJ_G0024023.1 mouse_genomes_project 17 92918623 92955914 + MGP_LPJ_P0048628 Ston1 protein_coding protein_coding MGP_LPJ_T0048629.1 MGP_LPJ_G0024023.1 mouse_genomes_project 17 92918847 92930773 + Ston1 protein_coding retained_intron MGP_LPJ_T0048630.1 MGP_LPJ_G0024023.1 mouse_genomes_project 17 92919378 92930872 + Ston1 protein_coding retained_intron MGP_LPJ_T0047274.1 MGP_LPJ_G0023558.1 mouse_genomes_project 17 36234840 36240857 - MGP_LPJ_P0047274 Gtf2h4 protein_coding protein_coding MGP_LPJ_T0047275.1 MGP_LPJ_G0023558.1 mouse_genomes_project 17 36234848 36235884 - Gtf2h4 protein_coding retained_intron MGP_LPJ_T0047276.1 MGP_LPJ_G0023558.1 mouse_genomes_project 17 36234849 36236963 - Gtf2h4 protein_coding retained_intron MGP_LPJ_T0047277.1 MGP_LPJ_G0023558.1 mouse_genomes_project 17 36234851 36240736 - MGP_LPJ_P0047277 Gtf2h4 protein_coding protein_coding MGP_LPJ_T0047278.1 MGP_LPJ_G0023558.1 mouse_genomes_project 17 36234952 36240821 - MGP_LPJ_P0047278 Gtf2h4 protein_coding nonsense_mediated_decay MGP_LPJ_T0047279.1 MGP_LPJ_G0023558.1 mouse_genomes_project 17 36237496 36240806 - Gtf2h4 protein_coding retained_intron MGP_LPJ_T0047280.1 MGP_LPJ_G0023558.1 mouse_genomes_project 17 36237853 36240808 - MGP_LPJ_P0047280 Gtf2h4 protein_coding protein_coding MGP_LPJ_T0047281.1 MGP_LPJ_G0023558.1 mouse_genomes_project 17 36238454 36240635 - MGP_LPJ_P0047281 Gtf2h4 protein_coding protein_coding MGP_LPJ_T0047282.1 MGP_LPJ_G0023558.1 mouse_genomes_project 17 36238873 36240799 - Gtf2h4 protein_coding retained_intron MGP_LPJ_T0047283.1 MGP_LPJ_G0023558.1 mouse_genomes_project 17 36239010 36240416 - Gtf2h4 protein_coding retained_intron MGP_LPJ_T0047284.1 MGP_LPJ_G0023558.1 mouse_genomes_project 17 36239160 36240677 - Gtf2h4 protein_coding processed_transcript MGP_LPJ_T0047285.1 MGP_LPJ_G0023558.1 mouse_genomes_project 17 36239175 36240777 - MGP_LPJ_P0047285 Gtf2h4 protein_coding protein_coding MGP_LPJ_T0048147.1 MGP_LPJ_G0023850.1 mouse_genomes_project 17 59256833 59287884 - MGP_LPJ_P0048147 Acsbg2 protein_coding protein_coding MGP_LPJ_T0047299.1 MGP_LPJ_G0023561.1 mouse_genomes_project 17 36398368 36407988 + MGP_LPJ_P0047299 Flot1 protein_coding protein_coding MGP_LPJ_T0047300.1 MGP_LPJ_G0023561.1 mouse_genomes_project 17 36398485 36407807 + MGP_LPJ_P0047300 Flot1 protein_coding protein_coding MGP_LPJ_T0047301.1 MGP_LPJ_G0023561.1 mouse_genomes_project 17 36398520 36405214 + MGP_LPJ_P0047301 Flot1 protein_coding nonsense_mediated_decay MGP_LPJ_T0047302.1 MGP_LPJ_G0023561.1 mouse_genomes_project 17 36398564 36399539 + Flot1 protein_coding retained_intron MGP_LPJ_T0047303.1 MGP_LPJ_G0023561.1 mouse_genomes_project 17 36398664 36400884 + MGP_LPJ_P0047303 Flot1 protein_coding protein_coding MGP_LPJ_T0047304.1 MGP_LPJ_G0023561.1 mouse_genomes_project 17 36398687 36400896 + MGP_LPJ_P0047304 Flot1 protein_coding protein_coding MGP_LPJ_T0047305.1 MGP_LPJ_G0023561.1 mouse_genomes_project 17 36398731 36400883 + MGP_LPJ_P0047305 Flot1 protein_coding protein_coding MGP_LPJ_T0047306.1 MGP_LPJ_G0023561.1 mouse_genomes_project 17 36399136 36400069 + Flot1 protein_coding retained_intron MGP_LPJ_T0047307.1 MGP_LPJ_G0023561.1 mouse_genomes_project 17 36405275 36407823 + Flot1 protein_coding retained_intron MGP_LPJ_T0047308.1 MGP_LPJ_G0023561.1 mouse_genomes_project 17 36405690 36407837 + Flot1 protein_coding retained_intron MGP_LPJ_T0047309.1 MGP_LPJ_G0023561.1 mouse_genomes_project 17 36405829 36406660 + Flot1 protein_coding retained_intron MGP_LPJ_T0047988.1 MGP_LPJ_G0023788.1 mouse_genomes_project 17 51547030 51651159 - MGP_LPJ_P0047988 Daam2 protein_coding protein_coding MGP_LPJ_T0047989.1 MGP_LPJ_G0023788.1 mouse_genomes_project 17 51567016 51651154 - MGP_LPJ_P0047989 Daam2 protein_coding unknown_likely_coding MGP_LPJ_T0100475.1 MGP_LPJ_G0038738.1 mouse_genomes_project 17 37724689 37724816 - Gm25973 snoRNA snoRNA MGP_LPJ_T0046497.1 MGP_LPJ_G0023377.1 mouse_genomes_project 17 29418722 29512130 + MGP_LPJ_P0046497 Gm28043 protein_coding nonsense_mediated_decay MGP_LPJ_T0047489.1 MGP_LPJ_G0023604.1 mouse_genomes_project 17 37990574 37991513 - MGP_LPJ_P0047489 Olfr91 protein_coding protein_coding MGP_LPJ_T0045346.1 MGP_LPJ_G0023044.1 mouse_genomes_project 17 5872422 5873521 - Gm17087 protein_coding translated_processed_pseudogene MGP_LPJ_T0045347.1 MGP_LPJ_G0023044.1 mouse_genomes_project 17 5872969 5873440 - MGP_LPJ_P0045347 Gm17087 protein_coding protein_coding MGP_LPJ_T0047547.1 MGP_LPJ_G0023652.1 mouse_genomes_project 17 39652440 39659180 + MGP_LPJ_P0047547 Esp31 protein_coding protein_coding MGP_LPJ_T0045231.1 MGP_LPJ_G0023002.1 mouse_genomes_project 17 434479 640278 + MGP_LPJ_P0045231 Tiam2 protein_coding protein_coding MGP_LPJ_T0045232.1 MGP_LPJ_G0023002.1 mouse_genomes_project 17 508700 640278 + MGP_LPJ_P0045232 Tiam2 protein_coding protein_coding MGP_LPJ_T0045233.1 MGP_LPJ_G0023002.1 mouse_genomes_project 17 602291 639867 + MGP_LPJ_P0045233 Tiam2 protein_coding unknown_likely_coding MGP_LPJ_T0100474.1 MGP_LPJ_G0038737.1 mouse_genomes_project 17 35727984 35728060 + Gm25128 snoRNA snoRNA MGP_LPJ_T0013260.1 MGP_LPJ_G0011351.1 mouse_genomes_project 17 73514490 73514934 - processed_pseudogene processed_pseudogene MGP_LPJ_T0045608.1 MGP_LPJ_G0023157.1 mouse_genomes_project 17 21374668 21391222 + MGP_LPJ_P0045608 Zfp758 protein_coding protein_coding MGP_LPJ_T0045609.1 MGP_LPJ_G0023157.1 mouse_genomes_project 17 21374668 21391221 + MGP_LPJ_P0045609 Zfp758 protein_coding protein_coding MGP_LPJ_T0045610.1 MGP_LPJ_G0023157.1 mouse_genomes_project 17 21374670 21390258 + MGP_LPJ_P0045610 Zfp758 protein_coding protein_coding MGP_LPJ_T0045611.1 MGP_LPJ_G0023157.1 mouse_genomes_project 17 21374737 21391222 + MGP_LPJ_P0045611 Zfp758 protein_coding protein_coding MGP_LPJ_T0048453.1 MGP_LPJ_G0023954.1 mouse_genomes_project 17 82610444 82614269 + MGP_LPJ_P0048453 Cebpzos protein_coding protein_coding MGP_LPJ_T0048454.1 MGP_LPJ_G0023954.1 mouse_genomes_project 17 82610461 82614269 + MGP_LPJ_P0048454 Cebpzos protein_coding protein_coding MGP_LPJ_T0048455.1 MGP_LPJ_G0023954.1 mouse_genomes_project 17 82610644 82612401 + MGP_LPJ_P0048455 Cebpzos protein_coding protein_coding MGP_LPJ_T0047979.1 MGP_LPJ_G0023786.1 mouse_genomes_project 17 50987307 51169173 + MGP_LPJ_P0047979 Lrfn2 protein_coding protein_coding MGP_LPJ_T0045279.1 MGP_LPJ_G0023015.1 mouse_genomes_project 17 3567487 3923409 + MGP_LPJ_P0045279 protein_coding protein_coding MGP_LPJ_T0046176.1 MGP_LPJ_G0023302.1 mouse_genomes_project 17 25637537 25670739 - MGP_LPJ_P0046176 Fam234a protein_coding protein_coding MGP_LPJ_T0046177.1 MGP_LPJ_G0023302.1 mouse_genomes_project 17 25638428 25670658 - MGP_LPJ_P0046177 Fam234a protein_coding protein_coding MGP_LPJ_T0046178.1 MGP_LPJ_G0023302.1 mouse_genomes_project 17 25639259 25641990 - MGP_LPJ_P0046178 Fam234a protein_coding protein_coding MGP_LPJ_T0046179.1 MGP_LPJ_G0023302.1 mouse_genomes_project 17 25640962 25642712 - Fam234a protein_coding retained_intron MGP_LPJ_T0046180.1 MGP_LPJ_G0023302.1 mouse_genomes_project 17 25644037 25646340 - MGP_LPJ_P0046180 Fam234a protein_coding protein_coding MGP_LPJ_T0047431.1 MGP_LPJ_G0023590.1 mouse_genomes_project 17 37744009 37750506 - MGP_LPJ_P0047431 Trim15 protein_coding protein_coding MGP_LPJ_T0047432.1 MGP_LPJ_G0023590.1 mouse_genomes_project 17 37744011 37750529 - MGP_LPJ_P0047432 Trim15 protein_coding protein_coding MGP_LPJ_T0047433.1 MGP_LPJ_G0023590.1 mouse_genomes_project 17 37744636 37750065 - MGP_LPJ_P0047433 Trim15 protein_coding nonsense_mediated_decay MGP_LPJ_T0045691.1 MGP_LPJ_G0023183.1 mouse_genomes_project 17 23038227 23049347 + Prss32 protein_coding processed_transcript MGP_LPJ_T0045692.1 MGP_LPJ_G0023183.1 mouse_genomes_project 17 23048426 23054596 + MGP_LPJ_P0045692 Prss32 protein_coding protein_coding MGP_LPJ_T0045693.1 MGP_LPJ_G0023183.1 mouse_genomes_project 17 23048669 23054156 + MGP_LPJ_P0045693 Prss32 protein_coding nonsense_mediated_decay MGP_LPJ_T0013227.1 MGP_LPJ_G0011318.1 mouse_genomes_project 17 38057334 38058001 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010217.1 MGP_LPJ_G0008335.1 mouse_genomes_project 17 35264481 35264544 - Mir6971 miRNA miRNA MGP_LPJ_T0006950.1 MGP_LPJ_G0005725.1 mouse_genomes_project 17 34187404 36913573 + lincRNA lincRNA MGP_LPJ_T0006960.1 MGP_LPJ_G0005725.1 mouse_genomes_project 17 36687886 36912801 + lincRNA lincRNA MGP_LPJ_T0006961.1 MGP_LPJ_G0005725.1 mouse_genomes_project 17 36687886 36912800 + lincRNA lincRNA MGP_LPJ_T0047088.1 MGP_LPJ_G0023513.1 mouse_genomes_project 17 35433292 35439746 + MGP_LPJ_P0047088 Hspa1l protein_coding protein_coding MGP_LPJ_T0046897.1 MGP_LPJ_G0023472.1 mouse_genomes_project 17 34458294 34468821 + MGP_LPJ_P0046897 Tap1 protein_coding protein_coding MGP_LPJ_T0046898.1 MGP_LPJ_G0023472.1 mouse_genomes_project 17 34458469 34463866 + Tap1 protein_coding retained_intron MGP_LPJ_T0046899.1 MGP_LPJ_G0023472.1 mouse_genomes_project 17 34458475 34468821 + Tap1 protein_coding retained_intron MGP_LPJ_T0046900.1 MGP_LPJ_G0023472.1 mouse_genomes_project 17 34458543 34468815 + MGP_LPJ_P0046900 Tap1 protein_coding protein_coding MGP_LPJ_T0046901.1 MGP_LPJ_G0023472.1 mouse_genomes_project 17 34461480 34468816 + Tap1 protein_coding retained_intron MGP_LPJ_T0046902.1 MGP_LPJ_G0023472.1 mouse_genomes_project 17 34462341 34465155 + MGP_LPJ_P0046902 Tap1 protein_coding protein_coding MGP_LPJ_T0046903.1 MGP_LPJ_G0023472.1 mouse_genomes_project 17 34464643 34468183 + Tap1 protein_coding retained_intron MGP_LPJ_T0017488.1 MGP_LPJ_G0015254.1 mouse_genomes_project 17 12875050 12891547 + Gm28869 processed_transcript processed_transcript MGP_LPJ_T0099230.1 MGP_LPJ_G0037493.1 mouse_genomes_project 17 62084558 62084665 - Gm23203 snRNA snRNA MGP_LPJ_T0047841.1 MGP_LPJ_G0023752.1 mouse_genomes_project 17 49215159 49221113 - MGP_LPJ_P0047841 Guca1a protein_coding protein_coding MGP_LPJ_T0013273.1 MGP_LPJ_G0011364.1 mouse_genomes_project 17 88970933 88998154 + processed_pseudogene processed_pseudogene MGP_LPJ_T0045673.1 MGP_LPJ_G0023179.1 mouse_genomes_project 17 22973830 22993973 + MGP_LPJ_P0045673 Srrm2 protein_coding protein_coding MGP_LPJ_T0045674.1 MGP_LPJ_G0023179.1 mouse_genomes_project 17 22988623 23017214 + MGP_LPJ_P0045674 Srrm2 protein_coding protein_coding MGP_LPJ_T0045675.1 MGP_LPJ_G0023179.1 mouse_genomes_project 17 22988657 23017219 + MGP_LPJ_P0045675 Srrm2 protein_coding protein_coding MGP_LPJ_T0045676.1 MGP_LPJ_G0023179.1 mouse_genomes_project 17 22993374 23002214 + MGP_LPJ_P0045676 Srrm2 protein_coding protein_coding MGP_LPJ_T0045677.1 MGP_LPJ_G0023179.1 mouse_genomes_project 17 22993554 22994165 + Srrm2 protein_coding retained_intron MGP_LPJ_T0045678.1 MGP_LPJ_G0023179.1 mouse_genomes_project 17 23003947 23004875 + MGP_LPJ_P0045678 Srrm2 protein_coding nonsense_mediated_decay MGP_LPJ_T0045679.1 MGP_LPJ_G0023179.1 mouse_genomes_project 17 23004175 23008771 + Srrm2 protein_coding retained_intron MGP_LPJ_T0045680.1 MGP_LPJ_G0023179.1 mouse_genomes_project 17 23011586 23014807 + Srrm2 protein_coding processed_transcript MGP_LPJ_T0045681.1 MGP_LPJ_G0023179.1 mouse_genomes_project 17 23013665 23014939 + MGP_LPJ_P0045681 Srrm2 protein_coding nonsense_mediated_decay MGP_LPJ_T0045682.1 MGP_LPJ_G0023179.1 mouse_genomes_project 17 23015799 23016602 + Srrm2 protein_coding retained_intron MGP_LPJ_T0048143.1 MGP_LPJ_G0023848.1 mouse_genomes_project 17 59179298 59181290 + Prr22 protein_coding retained_intron MGP_LPJ_T0048144.1 MGP_LPJ_G0023848.1 mouse_genomes_project 17 59179324 59181272 + MGP_LPJ_P0048144 Prr22 protein_coding protein_coding MGP_LPJ_T0048532.1 MGP_LPJ_G0023991.1 mouse_genomes_project 17 88560735 88595437 + MGP_LPJ_P0048532 Dync2li1 protein_coding protein_coding MGP_LPJ_T0010191.1 MGP_LPJ_G0008309.1 mouse_genomes_project 17 23274951 23275032 + Gm27700 miRNA miRNA MGP_LPJ_T0101983.1 MGP_LPJ_G0040020.1 mouse_genomes_project 17 38339549 38339919 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0006966.1 MGP_LPJ_G0005739.1 mouse_genomes_project 17 47414100 47467832 + lincRNA lincRNA MGP_LPJ_T0006967.1 MGP_LPJ_G0005739.1 mouse_genomes_project 17 47437961 47475143 + lincRNA lincRNA MGP_LPJ_T0048288.1 MGP_LPJ_G0023907.1 mouse_genomes_project 17 72529038 72585447 + MGP_LPJ_P0048288 Akain1 protein_coding protein_coding MGP_LPJ_T0048287.1 MGP_LPJ_G0023906.1 mouse_genomes_project 17 72468148 72476481 + MGP_LPJ_P0048287 Zbtb14 protein_coding protein_coding MGP_LPJ_T0013276.1 MGP_LPJ_G0011367.1 mouse_genomes_project 17 91223345 91224230 + processed_pseudogene processed_pseudogene MGP_LPJ_T0046243.1 MGP_LPJ_G0023319.1 mouse_genomes_project 17 26453086 26456125 + MGP_LPJ_P0046243 Zbtb9 protein_coding protein_coding MGP_LPJ_T0045642.1 MGP_LPJ_G0023166.1 mouse_genomes_project 17 22790768 22807045 - MGP_LPJ_P0045642 Mmp25 protein_coding protein_coding MGP_LPJ_T0047895.1 MGP_LPJ_G0023766.1 mouse_genomes_project 17 49595144 49603612 + MGP_LPJ_P0047895 Pgc protein_coding protein_coding MGP_LPJ_T0047896.1 MGP_LPJ_G0023766.1 mouse_genomes_project 17 49595146 49601238 + MGP_LPJ_P0047896 Pgc protein_coding protein_coding MGP_LPJ_T0046713.1 MGP_LPJ_G0023439.1 mouse_genomes_project 17 33759602 33816106 + MGP_LPJ_P0046713 Myo1f protein_coding protein_coding MGP_LPJ_T0046714.1 MGP_LPJ_G0023439.1 mouse_genomes_project 17 33759628 33816102 + MGP_LPJ_P0046714 Myo1f protein_coding nonsense_mediated_decay MGP_LPJ_T0046715.1 MGP_LPJ_G0023439.1 mouse_genomes_project 17 33759648 33783705 + MGP_LPJ_P0046715 Myo1f protein_coding protein_coding MGP_LPJ_T0046716.1 MGP_LPJ_G0023439.1 mouse_genomes_project 17 33788102 33816108 + Myo1f protein_coding retained_intron MGP_LPJ_T0101289.1 MGP_LPJ_G0039517.1 mouse_genomes_project 17 56005653 56006327 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0006987.1 MGP_LPJ_G0005750.1 mouse_genomes_project 17 72504243 72529017 - A930029G22Rik lincRNA lincRNA MGP_LPJ_T0010192.1 MGP_LPJ_G0008310.1 mouse_genomes_project 17 23507115 23507193 - Mir5134 miRNA miRNA MGP_LPJ_T0048357.1 MGP_LPJ_G0023918.1 mouse_genomes_project 17 74694190 74726455 - MGP_LPJ_P0048357 Ndc80 protein_coding protein_coding MGP_LPJ_T0047508.1 MGP_LPJ_G0023621.1 mouse_genomes_project 17 38455165 38457841 - MGP_LPJ_P0047508 H2-M2 protein_coding protein_coding MGP_LPJ_T0047509.1 MGP_LPJ_G0023621.1 mouse_genomes_project 17 38455285 38457842 - MGP_LPJ_P0047509 H2-M2 protein_coding protein_coding MGP_LPJ_T0047138.1 MGP_LPJ_G0023522.1 mouse_genomes_project 17 35530893 35535128 + MGP_LPJ_P0047138 Ly6g6c protein_coding protein_coding MGP_LPJ_T0047139.1 MGP_LPJ_G0023522.1 mouse_genomes_project 17 35532828 35535553 + MGP_LPJ_P0047139 Ly6g6c protein_coding protein_coding MGP_LPJ_T0047140.1 MGP_LPJ_G0023522.1 mouse_genomes_project 17 35532893 35535037 + MGP_LPJ_P0047140 Ly6g6c protein_coding protein_coding MGP_LPJ_T0048443.1 MGP_LPJ_G0023951.1 mouse_genomes_project 17 82534022 82536477 - protein_coding retained_intron MGP_LPJ_T0048444.1 MGP_LPJ_G0023951.1 mouse_genomes_project 17 82534640 82535099 - protein_coding processed_transcript MGP_LPJ_T0045617.1 MGP_LPJ_G0023160.1 mouse_genomes_project 17 21849646 21859064 + MGP_LPJ_P0045617 Gm5493 protein_coding protein_coding MGP_LPJ_T0047079.1 MGP_LPJ_G0023508.1 mouse_genomes_project 17 35366138 35383942 + Slc44a4 protein_coding retained_intron MGP_LPJ_T0047080.1 MGP_LPJ_G0023508.1 mouse_genomes_project 17 35366142 35383919 + MGP_LPJ_P0047080 Slc44a4 protein_coding protein_coding MGP_LPJ_T0047081.1 MGP_LPJ_G0023508.1 mouse_genomes_project 17 35370645 35383999 + MGP_LPJ_P0047081 Slc44a4 protein_coding protein_coding MGP_LPJ_T0046473.1 MGP_LPJ_G0023370.1 mouse_genomes_project 17 29109698 29126885 - MGP_LPJ_P0046473 Mtch1 protein_coding protein_coding MGP_LPJ_T0046474.1 MGP_LPJ_G0023370.1 mouse_genomes_project 17 29109702 29126885 - MGP_LPJ_P0046474 Mtch1 protein_coding protein_coding MGP_LPJ_T0046475.1 MGP_LPJ_G0023370.1 mouse_genomes_project 17 29109740 29111632 - Mtch1 protein_coding processed_transcript MGP_LPJ_T0046476.1 MGP_LPJ_G0023370.1 mouse_genomes_project 17 29111345 29111734 - Mtch1 protein_coding processed_transcript MGP_LPJ_T0046477.1 MGP_LPJ_G0023370.1 mouse_genomes_project 17 29112850 29117719 - Mtch1 protein_coding retained_intron MGP_LPJ_T0046478.1 MGP_LPJ_G0023370.1 mouse_genomes_project 17 29117097 29126152 - MGP_LPJ_P0046478 Mtch1 protein_coding protein_coding MGP_LPJ_T0046479.1 MGP_LPJ_G0023370.1 mouse_genomes_project 17 29118057 29120192 - Mtch1 protein_coding retained_intron MGP_LPJ_T0048344.1 MGP_LPJ_G0023915.1 mouse_genomes_project 17 74444329 74503190 - MGP_LPJ_P0048344 Emilin2 protein_coding protein_coding MGP_LPJ_T0045583.1 MGP_LPJ_G0023143.1 mouse_genomes_project 17 20298240 20305270 + MGP_LPJ_P0045583 Zfp52 protein_coding protein_coding MGP_LPJ_T0006912.1 MGP_LPJ_G0005694.1 mouse_genomes_project 17 11146166 11148429 + lincRNA lincRNA MGP_LPJ_T0046048.1 MGP_LPJ_G0023275.1 mouse_genomes_project 17 25188374 25190849 - MGP_LPJ_P0046048 Metrn protein_coding protein_coding MGP_LPJ_T0046049.1 MGP_LPJ_G0023275.1 mouse_genomes_project 17 25188750 25190940 - MGP_LPJ_P0046049 Metrn protein_coding protein_coding MGP_LPJ_T0047496.1 MGP_LPJ_G0023611.1 mouse_genomes_project 17 38171151 38172210 - MGP_LPJ_P0047496 Olfr97 protein_coding protein_coding MGP_LPJ_T0048471.1 MGP_LPJ_G0023962.1 mouse_genomes_project 17 83421541 83433882 - MGP_LPJ_P0048471 Cyp1b1 protein_coding protein_coding MGP_LPJ_T0100480.1 MGP_LPJ_G0038743.1 mouse_genomes_project 17 65990191 65990308 + Gm24730 snoRNA snoRNA MGP_LPJ_T0046047.1 MGP_LPJ_G0023274.1 mouse_genomes_project 17 25184309 25186088 - MGP_LPJ_P0046047 Fam173a protein_coding protein_coding MGP_LPJ_T0003745.1 MGP_LPJ_G0003377.1 mouse_genomes_project 17 28582217 28586585 - Pnpla1os antisense antisense MGP_LPJ_T0001019.1 MGP_LPJ_G0000944.1 mouse_genomes_project 17 53964516 53969295 - TEC TEC MGP_LPJ_T0045542.1 MGP_LPJ_G0023111.1 mouse_genomes_project 17 18121468 18159372 + MGP_LPJ_P0045542 protein_coding protein_coding MGP_LPJ_T0013278.1 MGP_LPJ_G0011369.1 mouse_genomes_project 17 95148487 95149728 - processed_pseudogene processed_pseudogene MGP_LPJ_T0048435.1 MGP_LPJ_G0023945.1 mouse_genomes_project 17 81860359 82041951 + MGP_LPJ_P0048435 Crim1 protein_coding protein_coding MGP_LPJ_T0013270.1 MGP_LPJ_G0011361.1 mouse_genomes_project 17 84738862 84739244 - processed_pseudogene processed_pseudogene MGP_LPJ_T0047602.1 MGP_LPJ_G0023688.1 mouse_genomes_project 17 45235809 45317859 + MGP_LPJ_P0047602 Cyp39a1 protein_coding protein_coding MGP_LPJ_T0047603.1 MGP_LPJ_G0023688.1 mouse_genomes_project 17 45235993 45316405 + MGP_LPJ_P0047603 Cyp39a1 protein_coding unknown_likely_coding MGP_LPJ_T0045317.1 MGP_LPJ_G0023037.1 mouse_genomes_project 17 5524559 5547834 + MGP_LPJ_P0045317 Ccr6 protein_coding protein_coding MGP_LPJ_T0045318.1 MGP_LPJ_G0023037.1 mouse_genomes_project 17 5531006 5547834 + MGP_LPJ_P0045318 Ccr6 protein_coding protein_coding MGP_LPJ_T0045319.1 MGP_LPJ_G0023037.1 mouse_genomes_project 17 5532287 5547834 + MGP_LPJ_P0045319 Ccr6 protein_coding protein_coding MGP_LPJ_T0045320.1 MGP_LPJ_G0023037.1 mouse_genomes_project 17 5532287 5547834 + MGP_LPJ_P0045320 Ccr6 protein_coding protein_coding MGP_LPJ_T0045321.1 MGP_LPJ_G0023037.1 mouse_genomes_project 17 5532287 5547834 + MGP_LPJ_P0045321 Ccr6 protein_coding protein_coding MGP_LPJ_T0045322.1 MGP_LPJ_G0023037.1 mouse_genomes_project 17 5532287 5547834 + MGP_LPJ_P0045322 Ccr6 protein_coding protein_coding MGP_LPJ_T0048044.1 MGP_LPJ_G0023810.1 mouse_genomes_project 17 58279163 58294629 - MGP_LPJ_P0048044 Zfp119b protein_coding protein_coding MGP_LPJ_T0047178.1 MGP_LPJ_G0023533.1 mouse_genomes_project 17 35606960 35619088 + MGP_LPJ_P0047178 Bag6 protein_coding protein_coding MGP_LPJ_T0047179.1 MGP_LPJ_G0023533.1 mouse_genomes_project 17 35606960 35619105 + MGP_LPJ_P0047179 Bag6 protein_coding protein_coding MGP_LPJ_T0047180.1 MGP_LPJ_G0023533.1 mouse_genomes_project 17 35606987 35619089 + MGP_LPJ_P0047180 Bag6 protein_coding protein_coding MGP_LPJ_T0047181.1 MGP_LPJ_G0023533.1 mouse_genomes_project 17 35607010 35612092 + MGP_LPJ_P0047181 Bag6 protein_coding protein_coding MGP_LPJ_T0047182.1 MGP_LPJ_G0023533.1 mouse_genomes_project 17 35607268 35614378 + MGP_LPJ_P0047182 Bag6 protein_coding protein_coding MGP_LPJ_T0047183.1 MGP_LPJ_G0023533.1 mouse_genomes_project 17 35607292 35612155 + MGP_LPJ_P0047183 Bag6 protein_coding protein_coding MGP_LPJ_T0047184.1 MGP_LPJ_G0023533.1 mouse_genomes_project 17 35607500 35610488 + MGP_LPJ_P0047184 Bag6 protein_coding protein_coding MGP_LPJ_T0047185.1 MGP_LPJ_G0023533.1 mouse_genomes_project 17 35607512 35618132 + MGP_LPJ_P0047185 Bag6 protein_coding protein_coding MGP_LPJ_T0047186.1 MGP_LPJ_G0023533.1 mouse_genomes_project 17 35607526 35619103 + MGP_LPJ_P0047186 Bag6 protein_coding protein_coding MGP_LPJ_T0047187.1 MGP_LPJ_G0023533.1 mouse_genomes_project 17 35607905 35610748 + Bag6 protein_coding retained_intron MGP_LPJ_T0047188.1 MGP_LPJ_G0023533.1 mouse_genomes_project 17 35610355 35611633 + Bag6 protein_coding retained_intron MGP_LPJ_T0047189.1 MGP_LPJ_G0023533.1 mouse_genomes_project 17 35612013 35613176 + Bag6 protein_coding retained_intron MGP_LPJ_T0047190.1 MGP_LPJ_G0023533.1 mouse_genomes_project 17 35612941 35613769 + Bag6 protein_coding retained_intron MGP_LPJ_T0047191.1 MGP_LPJ_G0023533.1 mouse_genomes_project 17 35613759 35614385 + Bag6 protein_coding retained_intron MGP_LPJ_T0047192.1 MGP_LPJ_G0023533.1 mouse_genomes_project 17 35617670 35619102 + MGP_LPJ_P0047192 Bag6 protein_coding protein_coding MGP_LPJ_T0047193.1 MGP_LPJ_G0023533.1 mouse_genomes_project 17 35618159 35619079 + Bag6 protein_coding retained_intron MGP_LPJ_T0048137.1 MGP_LPJ_G0023843.1 mouse_genomes_project 17 59071563 59113905 + MGP_LPJ_P0048137 Ranbp3 protein_coding protein_coding MGP_LPJ_T0099221.1 MGP_LPJ_G0037484.1 mouse_genomes_project 17 42368718 42368866 - Gm23078 snRNA snRNA MGP_LPJ_T0013234.1 MGP_LPJ_G0011325.1 mouse_genomes_project 17 38925139 38928296 - processed_pseudogene processed_pseudogene MGP_LPJ_T0045910.1 MGP_LPJ_G0023241.1 mouse_genomes_project 17 24298733 24348461 - MGP_LPJ_P0045910 Cramp1l protein_coding unknown_likely_coding MGP_LPJ_T0047801.1 MGP_LPJ_G0023735.1 mouse_genomes_project 17 48433675 48440112 - MGP_LPJ_P0047801 Klhdc3 protein_coding protein_coding MGP_LPJ_T0047802.1 MGP_LPJ_G0023735.1 mouse_genomes_project 17 48433678 48440112 - MGP_LPJ_P0047802 Klhdc3 protein_coding protein_coding MGP_LPJ_T0006927.1 MGP_LPJ_G0005707.1 mouse_genomes_project 17 26320116 26351800 - Gm17382 lincRNA lincRNA MGP_LPJ_T0045586.1 MGP_LPJ_G0023146.1 mouse_genomes_project 17 20449227 20449486 + MGP_LPJ_P0045586 Gm10509 protein_coding protein_coding MGP_LPJ_T0047236.1 MGP_LPJ_G0023548.1 mouse_genomes_project 17 36055137 36065496 + MGP_LPJ_P0047236 Pou5f1 protein_coding protein_coding MGP_LPJ_T0047237.1 MGP_LPJ_G0023548.1 mouse_genomes_project 17 36056601 36062893 + MGP_LPJ_P0047237 Pou5f1 protein_coding protein_coding MGP_LPJ_T0047238.1 MGP_LPJ_G0023548.1 mouse_genomes_project 17 36061563 36062893 + MGP_LPJ_P0047238 Pou5f1 protein_coding protein_coding MGP_LPJ_T0047239.1 MGP_LPJ_G0023548.1 mouse_genomes_project 17 36061565 36062893 + MGP_LPJ_P0047239 Pou5f1 protein_coding protein_coding MGP_LPJ_T0047240.1 MGP_LPJ_G0023548.1 mouse_genomes_project 17 36061575 36062893 + MGP_LPJ_P0047240 Pou5f1 protein_coding protein_coding MGP_LPJ_T0047241.1 MGP_LPJ_G0023548.1 mouse_genomes_project 17 36061579 36062893 + MGP_LPJ_P0047241 Pou5f1 protein_coding protein_coding MGP_LPJ_T0099235.1 MGP_LPJ_G0037498.1 mouse_genomes_project 17 79592219 79592325 + Gm24126 snRNA snRNA MGP_LPJ_T0045449.1 MGP_LPJ_G0023074.1 mouse_genomes_project 17 12045836 12181415 + MGP_LPJ_P0045449 Smoc2 protein_coding protein_coding MGP_LPJ_T0013271.1 MGP_LPJ_G0011362.1 mouse_genomes_project 17 84738863 84739244 - processed_pseudogene processed_pseudogene MGP_LPJ_T0047758.1 MGP_LPJ_G0023722.1 mouse_genomes_project 17 48121598 48153543 + MGP_LPJ_P0047758 Zfp318 protein_coding protein_coding MGP_LPJ_T0047759.1 MGP_LPJ_G0023722.1 mouse_genomes_project 17 48121618 48159660 + MGP_LPJ_P0047759 Zfp318 protein_coding protein_coding MGP_LPJ_T0047760.1 MGP_LPJ_G0023722.1 mouse_genomes_project 17 48138801 48149447 + MGP_LPJ_P0047760 Zfp318 protein_coding nonsense_mediated_decay MGP_LPJ_T0047761.1 MGP_LPJ_G0023722.1 mouse_genomes_project 17 48144591 48148090 + Zfp318 protein_coding retained_intron MGP_LPJ_T0047762.1 MGP_LPJ_G0023722.1 mouse_genomes_project 17 48148357 48150050 + Zfp318 protein_coding retained_intron MGP_LPJ_T0046001.1 MGP_LPJ_G0023263.1 mouse_genomes_project 17 24861465 24868882 - MGP_LPJ_P0046001 Sstr5 protein_coding protein_coding MGP_LPJ_T0046002.1 MGP_LPJ_G0023263.1 mouse_genomes_project 17 24861465 24868882 - MGP_LPJ_P0046002 Sstr5 protein_coding protein_coding MGP_LPJ_T0045965.1 MGP_LPJ_G0023254.1 mouse_genomes_project 17 24605586 24620577 - MGP_LPJ_P0045965 Ube2i protein_coding protein_coding MGP_LPJ_T0045966.1 MGP_LPJ_G0023254.1 mouse_genomes_project 17 24605591 24617573 - MGP_LPJ_P0045966 Ube2i protein_coding protein_coding MGP_LPJ_T0045967.1 MGP_LPJ_G0023254.1 mouse_genomes_project 17 24605845 24620577 - MGP_LPJ_P0045967 Ube2i protein_coding protein_coding MGP_LPJ_T0045968.1 MGP_LPJ_G0023254.1 mouse_genomes_project 17 24605849 24618104 - MGP_LPJ_P0045968 Ube2i protein_coding protein_coding MGP_LPJ_T0045969.1 MGP_LPJ_G0023254.1 mouse_genomes_project 17 24605976 24617724 - MGP_LPJ_P0045969 Ube2i protein_coding protein_coding MGP_LPJ_T0045970.1 MGP_LPJ_G0023254.1 mouse_genomes_project 17 24608147 24609509 - Ube2i protein_coding retained_intron MGP_LPJ_T0045971.1 MGP_LPJ_G0023254.1 mouse_genomes_project 17 24608440 24620902 - MGP_LPJ_P0045971 Ube2i protein_coding protein_coding MGP_LPJ_T0045972.1 MGP_LPJ_G0023254.1 mouse_genomes_project 17 24609312 24617780 - MGP_LPJ_P0045972 Ube2i protein_coding protein_coding MGP_LPJ_T0045973.1 MGP_LPJ_G0023254.1 mouse_genomes_project 17 24610736 24618057 - MGP_LPJ_P0045973 Ube2i protein_coding protein_coding MGP_LPJ_T0045974.1 MGP_LPJ_G0023254.1 mouse_genomes_project 17 24612578 24620569 - MGP_LPJ_P0045974 Ube2i protein_coding protein_coding MGP_LPJ_T0045975.1 MGP_LPJ_G0023254.1 mouse_genomes_project 17 24613423 24617790 - MGP_LPJ_P0045975 Ube2i protein_coding protein_coding MGP_LPJ_T0045976.1 MGP_LPJ_G0023254.1 mouse_genomes_project 17 24613572 24617345 - MGP_LPJ_P0045976 Ube2i protein_coding protein_coding MGP_LPJ_T0045977.1 MGP_LPJ_G0023254.1 mouse_genomes_project 17 24616852 24617449 - Ube2i protein_coding processed_transcript MGP_LPJ_T0046425.1 MGP_LPJ_G0023360.1 mouse_genomes_project 17 28668236 28677524 - MGP_LPJ_P0046425 Pxt1 protein_coding protein_coding MGP_LPJ_T0003746.1 MGP_LPJ_G0003378.1 mouse_genomes_project 17 28635183 28636690 + 1700030A11Rik antisense antisense MGP_LPJ_T0047816.1 MGP_LPJ_G0023741.1 mouse_genomes_project 17 48521854 48531372 - MGP_LPJ_P0047816 Ptcra protein_coding protein_coding MGP_LPJ_T0045600.1 MGP_LPJ_G0023153.1 mouse_genomes_project 17 20813955 20852810 - MGP_LPJ_P0045600 Zfp942 protein_coding protein_coding MGP_LPJ_T0045601.1 MGP_LPJ_G0023153.1 mouse_genomes_project 17 20815129 20820046 - MGP_LPJ_P0045601 Zfp942 protein_coding protein_coding MGP_LPJ_T0046113.1 MGP_LPJ_G0023288.1 mouse_genomes_project 17 25328610 25340946 - MGP_LPJ_P0046113 Pigq protein_coding protein_coding MGP_LPJ_T0046114.1 MGP_LPJ_G0023288.1 mouse_genomes_project 17 25328611 25345667 - Pigq protein_coding retained_intron MGP_LPJ_T0046115.1 MGP_LPJ_G0023288.1 mouse_genomes_project 17 25328611 25345832 - MGP_LPJ_P0046115 Pigq protein_coding protein_coding MGP_LPJ_T0046116.1 MGP_LPJ_G0023288.1 mouse_genomes_project 17 25328611 25345719 - MGP_LPJ_P0046116 Pigq protein_coding protein_coding MGP_LPJ_T0046117.1 MGP_LPJ_G0023288.1 mouse_genomes_project 17 25329679 25338585 - MGP_LPJ_P0046117 Pigq protein_coding nonsense_mediated_decay MGP_LPJ_T0046118.1 MGP_LPJ_G0023288.1 mouse_genomes_project 17 25329786 25335324 - Pigq protein_coding retained_intron MGP_LPJ_T0046119.1 MGP_LPJ_G0023288.1 mouse_genomes_project 17 25329828 25339845 - MGP_LPJ_P0046119 Pigq protein_coding protein_coding MGP_LPJ_T0046120.1 MGP_LPJ_G0023288.1 mouse_genomes_project 17 25333979 25335064 - Pigq protein_coding retained_intron MGP_LPJ_T0046121.1 MGP_LPJ_G0023288.1 mouse_genomes_project 17 25337779 25345719 - Pigq protein_coding retained_intron MGP_LPJ_T0046122.1 MGP_LPJ_G0023288.1 mouse_genomes_project 17 25338862 25345717 - MGP_LPJ_P0046122 Pigq protein_coding protein_coding MGP_LPJ_T0046123.1 MGP_LPJ_G0023288.1 mouse_genomes_project 17 25340258 25345713 - Pigq protein_coding retained_intron MGP_LPJ_T0046124.1 MGP_LPJ_G0023288.1 mouse_genomes_project 17 25340864 25346644 - MGP_LPJ_P0046124 Pigq protein_coding protein_coding MGP_LPJ_T0046125.1 MGP_LPJ_G0023288.1 mouse_genomes_project 17 25340918 25348288 - MGP_LPJ_P0046125 Pigq protein_coding protein_coding MGP_LPJ_T0046126.1 MGP_LPJ_G0023288.1 mouse_genomes_project 17 25341047 25346614 - MGP_LPJ_P0046126 Pigq protein_coding protein_coding MGP_LPJ_T0101287.1 MGP_LPJ_G0039516.1 mouse_genomes_project 17 25302747 25303080 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0101288.1 MGP_LPJ_G0039516.1 mouse_genomes_project 17 25302753 25302943 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0047510.1 MGP_LPJ_G0023622.1 mouse_genomes_project 17 38505695 38507982 + MGP_LPJ_P0047510 protein_coding protein_coding MGP_LPJ_T0046532.1 MGP_LPJ_G0023386.1 mouse_genomes_project 17 30902964 30959714 + MGP_LPJ_P0046532 protein_coding protein_coding MGP_LPJ_T0046533.1 MGP_LPJ_G0023386.1 mouse_genomes_project 17 30902964 30959714 + MGP_LPJ_P0046533 protein_coding protein_coding MGP_LPJ_T0046534.1 MGP_LPJ_G0023386.1 mouse_genomes_project 17 30902968 30959714 + MGP_LPJ_P0046534 protein_coding protein_coding MGP_LPJ_T0046929.1 MGP_LPJ_G0023483.1 mouse_genomes_project 17 34682004 34744394 + MGP_LPJ_P0046929 BC051142 protein_coding protein_coding MGP_LPJ_T0046930.1 MGP_LPJ_G0023483.1 mouse_genomes_project 17 34682005 34701407 + BC051142 protein_coding processed_transcript MGP_LPJ_T0046931.1 MGP_LPJ_G0023483.1 mouse_genomes_project 17 34682005 34729002 + MGP_LPJ_P0046931 BC051142 protein_coding protein_coding MGP_LPJ_T0046932.1 MGP_LPJ_G0023483.1 mouse_genomes_project 17 34682005 34744394 + MGP_LPJ_P0046932 BC051142 protein_coding protein_coding MGP_LPJ_T0046933.1 MGP_LPJ_G0023483.1 mouse_genomes_project 17 34682006 34704556 + BC051142 protein_coding retained_intron MGP_LPJ_T0046934.1 MGP_LPJ_G0023483.1 mouse_genomes_project 17 34682025 34744394 + MGP_LPJ_P0046934 BC051142 protein_coding protein_coding MGP_LPJ_T0046935.1 MGP_LPJ_G0023483.1 mouse_genomes_project 17 34700791 34723361 + MGP_LPJ_P0046935 BC051142 protein_coding protein_coding MGP_LPJ_T0046936.1 MGP_LPJ_G0023483.1 mouse_genomes_project 17 34701402 34719581 + BC051142 protein_coding processed_transcript MGP_LPJ_T0046937.1 MGP_LPJ_G0023483.1 mouse_genomes_project 17 34701424 34705319 + MGP_LPJ_P0046937 BC051142 protein_coding protein_coding MGP_LPJ_T0046938.1 MGP_LPJ_G0023483.1 mouse_genomes_project 17 34702927 34744047 + MGP_LPJ_P0046938 BC051142 protein_coding unknown_likely_coding MGP_LPJ_T0046338.1 MGP_LPJ_G0023343.1 mouse_genomes_project 17 27861891 27939265 + MGP_LPJ_P0046338 Ppard protein_coding protein_coding MGP_LPJ_T0046339.1 MGP_LPJ_G0023343.1 mouse_genomes_project 17 27861903 27934175 + Ppard protein_coding retained_intron MGP_LPJ_T0046340.1 MGP_LPJ_G0023343.1 mouse_genomes_project 17 27861919 27937693 + Ppard protein_coding processed_transcript MGP_LPJ_T0046341.1 MGP_LPJ_G0023343.1 mouse_genomes_project 17 27861944 27937771 + Ppard protein_coding retained_intron MGP_LPJ_T0046342.1 MGP_LPJ_G0023343.1 mouse_genomes_project 17 27907268 27908724 + Ppard protein_coding processed_transcript MGP_LPJ_T0046343.1 MGP_LPJ_G0023343.1 mouse_genomes_project 17 27907753 27936548 + MGP_LPJ_P0046343 Ppard protein_coding protein_coding MGP_LPJ_T0100471.1 MGP_LPJ_G0038734.1 mouse_genomes_project 17 35405094 35405157 - Gm25744 snoRNA snoRNA MGP_LPJ_T0045784.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23809385 23830622 - MGP_LPJ_P0045784 Traf7 protein_coding protein_coding MGP_LPJ_T0045785.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23809671 23813309 - Traf7 protein_coding retained_intron MGP_LPJ_T0045786.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23809671 23830534 - MGP_LPJ_P0045786 Traf7 protein_coding nonsense_mediated_decay MGP_LPJ_T0045787.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23809671 23830574 - MGP_LPJ_P0045787 Traf7 protein_coding nonsense_mediated_decay MGP_LPJ_T0045788.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23809671 23821663 - MGP_LPJ_P0045788 Traf7 protein_coding protein_coding MGP_LPJ_T0045789.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23809671 23821663 - MGP_LPJ_P0045789 Traf7 protein_coding protein_coding MGP_LPJ_T0045790.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23809671 23830530 - MGP_LPJ_P0045790 Traf7 protein_coding protein_coding MGP_LPJ_T0045791.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23809675 23811854 - Traf7 protein_coding retained_intron MGP_LPJ_T0045792.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23810883 23811333 - Traf7 protein_coding retained_intron MGP_LPJ_T0045793.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23811034 23813193 - Traf7 protein_coding retained_intron MGP_LPJ_T0045794.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23811306 23813388 - Traf7 protein_coding retained_intron MGP_LPJ_T0045795.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23812417 23814895 - MGP_LPJ_P0045795 Traf7 protein_coding nonsense_mediated_decay MGP_LPJ_T0045796.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23812508 23816295 - MGP_LPJ_P0045796 Traf7 protein_coding nonsense_mediated_decay MGP_LPJ_T0045797.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23813067 23830547 - MGP_LPJ_P0045797 Traf7 protein_coding protein_coding MGP_LPJ_T0045798.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23814187 23814794 - Traf7 protein_coding retained_intron MGP_LPJ_T0045799.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23814614 23830173 - MGP_LPJ_P0045799 Traf7 protein_coding protein_coding MGP_LPJ_T0045800.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23814797 23830530 - MGP_LPJ_P0045800 Traf7 protein_coding nonsense_mediated_decay MGP_LPJ_T0045801.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23814809 23830517 - MGP_LPJ_P0045801 Traf7 protein_coding nonsense_mediated_decay MGP_LPJ_T0045802.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23814816 23830595 - MGP_LPJ_P0045802 Traf7 protein_coding nonsense_mediated_decay MGP_LPJ_T0045803.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23814892 23830232 - MGP_LPJ_P0045803 Traf7 protein_coding protein_coding MGP_LPJ_T0045804.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23815476 23830530 - MGP_LPJ_P0045804 Traf7 protein_coding nonsense_mediated_decay MGP_LPJ_T0045805.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23816275 23830505 - MGP_LPJ_P0045805 Traf7 protein_coding nonsense_mediated_decay MGP_LPJ_T0045806.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23817854 23830534 - Traf7 protein_coding retained_intron MGP_LPJ_T0045807.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23818119 23830552 - Traf7 protein_coding processed_transcript MGP_LPJ_T0045808.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23820826 23830535 - Traf7 protein_coding processed_transcript MGP_LPJ_T0045809.1 MGP_LPJ_G0023212.1 mouse_genomes_project 17 23821027 23830468 - Traf7 protein_coding retained_intron MGP_LPJ_T0048546.1 MGP_LPJ_G0023995.1 mouse_genomes_project 17 88931864 89006707 + MGP_LPJ_P0048546 Ppm1b protein_coding protein_coding MGP_LPJ_T0048547.1 MGP_LPJ_G0023995.1 mouse_genomes_project 17 88933124 88996164 + MGP_LPJ_P0048547 Ppm1b protein_coding protein_coding MGP_LPJ_T0048548.1 MGP_LPJ_G0023995.1 mouse_genomes_project 17 88970917 89006707 + MGP_LPJ_P0048548 Ppm1b protein_coding protein_coding MGP_LPJ_T0046260.1 MGP_LPJ_G0023325.1 mouse_genomes_project 17 26691097 26705937 - MGP_LPJ_P0046260 Lemd2 protein_coding protein_coding MGP_LPJ_T0046926.1 MGP_LPJ_G0023481.1 mouse_genomes_project 17 34630909 34648160 + MGP_LPJ_P0046926 Btnl2 protein_coding protein_coding MGP_LPJ_T0046927.1 MGP_LPJ_G0023481.1 mouse_genomes_project 17 34630909 34648159 + MGP_LPJ_P0046927 Btnl2 protein_coding protein_coding MGP_LPJ_T0101929.1 MGP_LPJ_G0039966.1 mouse_genomes_project 17 18942870 18950060 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0003802.1 MGP_LPJ_G0003420.1 mouse_genomes_project 17 91493400 91495682 - Gm15978 antisense antisense MGP_LPJ_T0101948.1 MGP_LPJ_G0039985.1 mouse_genomes_project 17 34611941 34613711 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0048398.1 MGP_LPJ_G0023939.1 mouse_genomes_project 17 77897361 77910897 + MGP_LPJ_P0048398 Yipf4 protein_coding protein_coding MGP_LPJ_T0011455.1 MGP_LPJ_G0009573.1 mouse_genomes_project 17 89629357 89629680 + Gm27283 misc_RNA misc_RNA MGP_LPJ_T0048145.1 MGP_LPJ_G0023849.1 mouse_genomes_project 17 59186760 59244741 - MGP_LPJ_P0048145 Rfx2 protein_coding protein_coding MGP_LPJ_T0048146.1 MGP_LPJ_G0023849.1 mouse_genomes_project 17 59186760 59244741 - MGP_LPJ_P0048146 Rfx2 protein_coding protein_coding MGP_LPJ_T0047520.1 MGP_LPJ_G0023631.1 mouse_genomes_project 17 38687631 38772672 + MGP_LPJ_P0047520 Olfr122 protein_coding protein_coding MGP_LPJ_T0045911.1 MGP_LPJ_G0023242.1 mouse_genomes_project 17 24348964 24428307 + MGP_LPJ_P0045911 Ift140 protein_coding protein_coding MGP_LPJ_T0045912.1 MGP_LPJ_G0023242.1 mouse_genomes_project 17 24349264 24435045 + MGP_LPJ_P0045912 Ift140 protein_coding protein_coding MGP_LPJ_T0045913.1 MGP_LPJ_G0023242.1 mouse_genomes_project 17 24349272 24353913 + Ift140 protein_coding processed_transcript MGP_LPJ_T0045914.1 MGP_LPJ_G0023242.1 mouse_genomes_project 17 24360654 24432281 + Ift140 protein_coding retained_intron MGP_LPJ_T0045915.1 MGP_LPJ_G0023242.1 mouse_genomes_project 17 24360890 24371957 + MGP_LPJ_P0045915 Ift140 protein_coding protein_coding MGP_LPJ_T0045916.1 MGP_LPJ_G0023242.1 mouse_genomes_project 17 24379342 24423501 + Ift140 protein_coding processed_transcript MGP_LPJ_T0045917.1 MGP_LPJ_G0023242.1 mouse_genomes_project 17 24379391 24435053 + Ift140 protein_coding processed_transcript MGP_LPJ_T0045920.1 MGP_LPJ_G0023242.1 mouse_genomes_project 17 24426166 24428650 + Ift140 protein_coding retained_intron MGP_LPJ_T0046920.1 MGP_LPJ_G0023478.1 mouse_genomes_project 17 34546685 34551840 - MGP_LPJ_P0046920 H2-Aa protein_coding protein_coding MGP_LPJ_T0046921.1 MGP_LPJ_G0023478.1 mouse_genomes_project 17 34546706 34551804 - MGP_LPJ_P0046921 H2-Aa protein_coding protein_coding MGP_LPJ_T0046922.1 MGP_LPJ_G0023478.1 mouse_genomes_project 17 34547713 34551790 - H2-Aa protein_coding retained_intron MGP_LPJ_T0046923.1 MGP_LPJ_G0023478.1 mouse_genomes_project 17 34550477 34551832 - H2-Aa protein_coding processed_transcript MGP_LPJ_T0048153.1 MGP_LPJ_G0023855.1 mouse_genomes_project 17 59419334 59421309 + MGP_LPJ_P0048153 Alkbh7 protein_coding protein_coding MGP_LPJ_T0048154.1 MGP_LPJ_G0023855.1 mouse_genomes_project 17 59419338 59421320 + MGP_LPJ_P0048154 Alkbh7 protein_coding protein_coding MGP_LPJ_T0048155.1 MGP_LPJ_G0023855.1 mouse_genomes_project 17 59420475 59421133 + Alkbh7 protein_coding retained_intron MGP_LPJ_T0048528.1 MGP_LPJ_G0023987.1 mouse_genomes_project 17 87693455 87713031 - MGP_LPJ_P0048528 Haao protein_coding protein_coding MGP_LPJ_T0046694.1 MGP_LPJ_G0023435.1 mouse_genomes_project 17 33529651 33557795 - MGP_LPJ_P0046694 Zfp81 protein_coding protein_coding MGP_LPJ_T0045863.1 MGP_LPJ_G0023233.1 mouse_genomes_project 17 24209479 24212718 + MGP_LPJ_P0045863 Igfals protein_coding protein_coding MGP_LPJ_T0046283.1 MGP_LPJ_G0023331.1 mouse_genomes_project 17 27212627 27218062 - MGP_LPJ_P0046283 Rps10 protein_coding unknown_likely_coding MGP_LPJ_T0046284.1 MGP_LPJ_G0023331.1 mouse_genomes_project 17 27212634 27221065 - MGP_LPJ_P0046284 Rps10 protein_coding protein_coding MGP_LPJ_T0046285.1 MGP_LPJ_G0023331.1 mouse_genomes_project 17 27212636 27222419 - MGP_LPJ_P0046285 Rps10 protein_coding protein_coding MGP_LPJ_T0046286.1 MGP_LPJ_G0023331.1 mouse_genomes_project 17 27212637 27221029 - MGP_LPJ_P0046286 Rps10 protein_coding protein_coding MGP_LPJ_T0046287.1 MGP_LPJ_G0023331.1 mouse_genomes_project 17 27212677 27220264 - MGP_LPJ_P0046287 Rps10 protein_coding protein_coding MGP_LPJ_T0046288.1 MGP_LPJ_G0023331.1 mouse_genomes_project 17 27213242 27221065 - Rps10 protein_coding processed_transcript MGP_LPJ_T0046289.1 MGP_LPJ_G0023331.1 mouse_genomes_project 17 27213874 27217847 - Rps10 protein_coding retained_intron MGP_LPJ_T0046290.1 MGP_LPJ_G0023331.1 mouse_genomes_project 17 27214170 27221018 - Rps10 protein_coding retained_intron MGP_LPJ_T0046291.1 MGP_LPJ_G0023331.1 mouse_genomes_project 17 27216373 27221033 - Rps10 protein_coding processed_transcript MGP_LPJ_T0046470.1 MGP_LPJ_G0023369.1 mouse_genomes_project 17 29093202 29104851 + Pi16 protein_coding retained_intron MGP_LPJ_T0046471.1 MGP_LPJ_G0023369.1 mouse_genomes_project 17 29093522 29104858 + MGP_LPJ_P0046471 Pi16 protein_coding protein_coding MGP_LPJ_T0046472.1 MGP_LPJ_G0023369.1 mouse_genomes_project 17 29093540 29105373 + MGP_LPJ_P0046472 Pi16 protein_coding protein_coding MGP_LPJ_T0010239.1 MGP_LPJ_G0008357.1 mouse_genomes_project 17 69986886 69986975 - Mir5709 miRNA miRNA MGP_LPJ_T0047040.1 MGP_LPJ_G0023502.1 mouse_genomes_project 17 35273063 35279042 + MGP_LPJ_P0047040 Nelfe protein_coding protein_coding MGP_LPJ_T0047041.1 MGP_LPJ_G0023502.1 mouse_genomes_project 17 35273070 35278927 + MGP_LPJ_P0047041 Nelfe protein_coding protein_coding MGP_LPJ_T0047042.1 MGP_LPJ_G0023502.1 mouse_genomes_project 17 35273080 35276762 + MGP_LPJ_P0047042 Nelfe protein_coding protein_coding MGP_LPJ_T0047043.1 MGP_LPJ_G0023502.1 mouse_genomes_project 17 35273080 35279045 + MGP_LPJ_P0047043 Nelfe protein_coding protein_coding MGP_LPJ_T0047044.1 MGP_LPJ_G0023502.1 mouse_genomes_project 17 35275280 35276542 + Nelfe protein_coding retained_intron MGP_LPJ_T0047045.1 MGP_LPJ_G0023502.1 mouse_genomes_project 17 35276608 35277199 + Nelfe protein_coding retained_intron MGP_LPJ_T0047046.1 MGP_LPJ_G0023502.1 mouse_genomes_project 17 35276928 35277427 + Nelfe protein_coding retained_intron MGP_LPJ_T0047772.1 MGP_LPJ_G0023726.1 mouse_genomes_project 17 48184064 48230185 - MGP_LPJ_P0047772 Ttbk1 protein_coding protein_coding MGP_LPJ_T0047773.1 MGP_LPJ_G0023726.1 mouse_genomes_project 17 48202304 48226744 - MGP_LPJ_P0047773 Ttbk1 protein_coding unknown_likely_coding MGP_LPJ_T0010214.1 MGP_LPJ_G0008332.1 mouse_genomes_project 17 34277313 34277423 - Mir219a-1 miRNA miRNA MGP_LPJ_T0045856.1 MGP_LPJ_G0023230.1 mouse_genomes_project 17 24134425 24169766 + MGP_LPJ_P0045856 Meiob protein_coding protein_coding MGP_LPJ_T0045700.1 MGP_LPJ_G0023189.1 mouse_genomes_project 17 23207965 23212366 - MGP_LPJ_P0045700 protein_coding protein_coding MGP_LPJ_T0003774.1 MGP_LPJ_G0003399.1 mouse_genomes_project 17 37809227 37819215 + 1700031A10Rik antisense antisense MGP_LPJ_T0047583.1 MGP_LPJ_G0023680.1 mouse_genomes_project 17 44529064 44605719 + MGP_LPJ_P0047583 Tnfrsf21 protein_coding protein_coding MGP_LPJ_T0047997.1 MGP_LPJ_G0023790.1 mouse_genomes_project 17 52096311 52280497 - MGP_LPJ_P0047997 Rftn1 protein_coding protein_coding MGP_LPJ_T0047998.1 MGP_LPJ_G0023790.1 mouse_genomes_project 17 52144149 52302286 - Rftn1 protein_coding retained_intron MGP_LPJ_T0046524.1 MGP_LPJ_G0023382.1 mouse_genomes_project 17 30054269 30450301 - MGP_LPJ_P0046524 Btbd9 protein_coding protein_coding MGP_LPJ_T0046525.1 MGP_LPJ_G0023382.1 mouse_genomes_project 17 30054269 30450301 - MGP_LPJ_P0046525 Btbd9 protein_coding protein_coding MGP_LPJ_T0013203.1 MGP_LPJ_G0011294.1 mouse_genomes_project 17 10315312 10316336 - processed_pseudogene processed_pseudogene MGP_LPJ_T0048047.1 MGP_LPJ_G0023813.1 mouse_genomes_project 17 58315545 58321696 + MGP_LPJ_P0048047 Shd protein_coding protein_coding MGP_LPJ_T0048048.1 MGP_LPJ_G0023813.1 mouse_genomes_project 17 58315586 58321708 + MGP_LPJ_P0048048 Shd protein_coding unknown_likely_coding MGP_LPJ_T0010228.1 MGP_LPJ_G0008346.1 mouse_genomes_project 17 47949839 47949928 + Mir693 miRNA miRNA MGP_LPJ_T0101981.1 MGP_LPJ_G0040018.1 mouse_genomes_project 17 38230427 38231355 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0046651.1 MGP_LPJ_G0023414.1 mouse_genomes_project 17 32565603 32590167 + MGP_LPJ_P0046651 Cyp4f17 protein_coding protein_coding MGP_LPJ_T0047575.1 MGP_LPJ_G0023676.1 mouse_genomes_project 17 44059102 44118827 - MGP_LPJ_P0047575 Opn5 protein_coding protein_coding MGP_LPJ_T0047990.1 MGP_LPJ_G0023789.1 mouse_genomes_project 17 51701976 51850058 + Kif6 protein_coding retained_intron MGP_LPJ_T0047991.1 MGP_LPJ_G0023789.1 mouse_genomes_project 17 51701979 51764964 + MGP_LPJ_P0047991 Kif6 protein_coding nonsense_mediated_decay MGP_LPJ_T0047992.1 MGP_LPJ_G0023789.1 mouse_genomes_project 17 51702012 52014971 + MGP_LPJ_P0047992 Kif6 protein_coding protein_coding MGP_LPJ_T0047993.1 MGP_LPJ_G0023789.1 mouse_genomes_project 17 51805812 51850058 + Kif6 protein_coding retained_intron MGP_LPJ_T0047994.1 MGP_LPJ_G0023789.1 mouse_genomes_project 17 51831367 51850060 + Kif6 protein_coding retained_intron MGP_LPJ_T0047995.1 MGP_LPJ_G0023789.1 mouse_genomes_project 17 51848580 51853705 + Kif6 protein_coding retained_intron MGP_LPJ_T0047996.1 MGP_LPJ_G0023789.1 mouse_genomes_project 17 51992249 52014971 + Kif6 protein_coding retained_intron MGP_LPJ_T0046925.1 MGP_LPJ_G0023480.1 mouse_genomes_project 17 34593756 34609197 + MGP_LPJ_P0046925 H2-Eb2 protein_coding protein_coding MGP_LPJ_T0013274.1 MGP_LPJ_G0011365.1 mouse_genomes_project 17 89501147 89501520 + processed_pseudogene processed_pseudogene MGP_LPJ_T0048600.1 MGP_LPJ_G0024015.1 mouse_genomes_project 17 91849901 91867063 + MGP_LPJ_P0048600 Epcam protein_coding protein_coding MGP_LPJ_T0101949.1 MGP_LPJ_G0039986.1 mouse_genomes_project 17 34672650 34680746 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0047194.1 MGP_LPJ_G0023534.1 mouse_genomes_project 17 35620858 35636649 - MGP_LPJ_P0047194 Prrc2a protein_coding protein_coding MGP_LPJ_T0047195.1 MGP_LPJ_G0023534.1 mouse_genomes_project 17 35620870 35634721 - MGP_LPJ_P0047195 Prrc2a protein_coding protein_coding MGP_LPJ_T0047196.1 MGP_LPJ_G0023534.1 mouse_genomes_project 17 35620959 35622149 - Prrc2a protein_coding retained_intron MGP_LPJ_T0047197.1 MGP_LPJ_G0023534.1 mouse_genomes_project 17 35622115 35622735 - Prrc2a protein_coding retained_intron MGP_LPJ_T0047198.1 MGP_LPJ_G0023534.1 mouse_genomes_project 17 35623952 35625011 - Prrc2a protein_coding retained_intron MGP_LPJ_T0047199.1 MGP_LPJ_G0023534.1 mouse_genomes_project 17 35628884 35636587 - Prrc2a protein_coding processed_transcript MGP_LPJ_T0006978.1 MGP_LPJ_G0005745.1 mouse_genomes_project 17 54360335 54376476 + Gm19585 lincRNA lincRNA MGP_LPJ_T0006979.1 MGP_LPJ_G0005745.1 mouse_genomes_project 17 54372084 54376272 + Gm19585 lincRNA lincRNA MGP_LPJ_T0045560.1 MGP_LPJ_G0023129.1 mouse_genomes_project 17 19510079 19511030 + MGP_LPJ_P0045560 Vmn1r230 protein_coding protein_coding MGP_LPJ_T0017478.1 MGP_LPJ_G0015250.1 mouse_genomes_project 17 5585871 5605874 - 4930506C21Rik processed_transcript processed_transcript MGP_LPJ_T0017479.1 MGP_LPJ_G0015250.1 mouse_genomes_project 17 5590816 5592280 - 4930506C21Rik processed_transcript processed_transcript MGP_LPJ_T0017480.1 MGP_LPJ_G0015250.1 mouse_genomes_project 17 5591506 5605902 - 4930506C21Rik processed_transcript retained_intron MGP_LPJ_T0047412.1 MGP_LPJ_G0023581.1 mouse_genomes_project 17 37048278 37049943 - MGP_LPJ_P0047412 H2-M10.2 protein_coding protein_coding MGP_LPJ_T0045247.1 MGP_LPJ_G0023009.1 mouse_genomes_project 17 2734953 3020449 + MGP_LPJ_P0045247 Zdhhc14 protein_coding protein_coding MGP_LPJ_T0048253.1 MGP_LPJ_G0023895.1 mouse_genomes_project 17 69012359 69047146 + MGP_LPJ_P0048253 Ddx11 protein_coding protein_coding MGP_LPJ_T0048254.1 MGP_LPJ_G0023895.1 mouse_genomes_project 17 69012633 69042962 + MGP_LPJ_P0048254 Ddx11 protein_coding unknown_likely_coding MGP_LPJ_T0006962.1 MGP_LPJ_G0005735.1 mouse_genomes_project 17 37012865 37017410 + Gm20546 lincRNA lincRNA MGP_LPJ_T0003756.1 MGP_LPJ_G0003384.1 mouse_genomes_project 17 32895807 32910628 + Gm26693 antisense antisense MGP_LPJ_T0047585.1 MGP_LPJ_G0023682.1 mouse_genomes_project 17 44928750 45010090 + MGP_LPJ_P0047585 Adgrf5 protein_coding protein_coding MGP_LPJ_T0047586.1 MGP_LPJ_G0023682.1 mouse_genomes_project 17 44951581 45005878 + MGP_LPJ_P0047586 Adgrf5 protein_coding unknown_likely_coding MGP_LPJ_T0046085.1 MGP_LPJ_G0023283.1 mouse_genomes_project 17 25242752 25259335 - Wdr90 protein_coding retained_intron MGP_LPJ_T0046086.1 MGP_LPJ_G0023283.1 mouse_genomes_project 17 25242752 25259427 - MGP_LPJ_P0046086 Wdr90 protein_coding protein_coding MGP_LPJ_T0046087.1 MGP_LPJ_G0023283.1 mouse_genomes_project 17 25242754 25259420 - Wdr90 protein_coding retained_intron MGP_LPJ_T0046088.1 MGP_LPJ_G0023283.1 mouse_genomes_project 17 25243049 25259453 - MGP_LPJ_P0046088 Wdr90 protein_coding protein_coding MGP_LPJ_T0046089.1 MGP_LPJ_G0023283.1 mouse_genomes_project 17 25243369 25244476 - Wdr90 protein_coding retained_intron MGP_LPJ_T0046090.1 MGP_LPJ_G0023283.1 mouse_genomes_project 17 25246550 25249742 - Wdr90 protein_coding retained_intron MGP_LPJ_T0046091.1 MGP_LPJ_G0023283.1 mouse_genomes_project 17 25247934 25249849 - Wdr90 protein_coding retained_intron MGP_LPJ_T0046092.1 MGP_LPJ_G0023283.1 mouse_genomes_project 17 25249892 25251872 - Wdr90 protein_coding retained_intron MGP_LPJ_T0046093.1 MGP_LPJ_G0023283.1 mouse_genomes_project 17 25251316 25259427 - Wdr90 protein_coding retained_intron MGP_LPJ_T0046094.1 MGP_LPJ_G0023283.1 mouse_genomes_project 17 25251806 25253276 - Wdr90 protein_coding retained_intron MGP_LPJ_T0046095.1 MGP_LPJ_G0023283.1 mouse_genomes_project 17 25253760 25257178 - MGP_LPJ_P0046095 Wdr90 protein_coding protein_coding MGP_LPJ_T0010195.1 MGP_LPJ_G0008313.1 mouse_genomes_project 17 24588989 24589077 - Mir3547 miRNA miRNA MGP_LPJ_T0013267.1 MGP_LPJ_G0011358.1 mouse_genomes_project 17 82359901 82364332 - processed_pseudogene processed_pseudogene MGP_LPJ_T0047881.1 MGP_LPJ_G0023762.1 mouse_genomes_project 17 49550808 49552347 - MGP_LPJ_P0047881 Tomm6 protein_coding protein_coding MGP_LPJ_T0047883.1 MGP_LPJ_G0023762.1 mouse_genomes_project 17 49550902 49552550 - Tomm6 protein_coding retained_intron MGP_LPJ_T0047884.1 MGP_LPJ_G0023762.1 mouse_genomes_project 17 49550902 49552232 - MGP_LPJ_P0047884 Tomm6 protein_coding protein_coding MGP_LPJ_T0045598.1 MGP_LPJ_G0023152.1 mouse_genomes_project 17 20730496 20778761 - MGP_LPJ_P0045598 Zfp947 protein_coding protein_coding MGP_LPJ_T0013208.1 MGP_LPJ_G0011299.1 mouse_genomes_project 17 20857805 20858547 - processed_pseudogene processed_pseudogene MGP_LPJ_T0045711.1 MGP_LPJ_G0023195.1 mouse_genomes_project 17 23339913 23412016 - MGP_LPJ_P0045711 Pdpk1 protein_coding protein_coding MGP_LPJ_T0045712.1 MGP_LPJ_G0023195.1 mouse_genomes_project 17 23339921 23412109 - MGP_LPJ_P0045712 Pdpk1 protein_coding protein_coding MGP_LPJ_T0045713.1 MGP_LPJ_G0023195.1 mouse_genomes_project 17 23342050 23412126 - MGP_LPJ_P0045713 Pdpk1 protein_coding protein_coding MGP_LPJ_T0045714.1 MGP_LPJ_G0023195.1 mouse_genomes_project 17 23354325 23359915 - Pdpk1 protein_coding processed_transcript MGP_LPJ_T0045715.1 MGP_LPJ_G0023195.1 mouse_genomes_project 17 23357720 23421150 - Pdpk1 protein_coding processed_transcript MGP_LPJ_T0045716.1 MGP_LPJ_G0023195.1 mouse_genomes_project 17 23369482 23412112 - Pdpk1 protein_coding retained_intron MGP_LPJ_T0045717.1 MGP_LPJ_G0023195.1 mouse_genomes_project 17 23372312 23410564 - MGP_LPJ_P0045717 Pdpk1 protein_coding protein_coding MGP_LPJ_T0045718.1 MGP_LPJ_G0023195.1 mouse_genomes_project 17 23372364 23388237 - MGP_LPJ_P0045718 Pdpk1 protein_coding protein_coding MGP_LPJ_T0045719.1 MGP_LPJ_G0023195.1 mouse_genomes_project 17 23376390 23411684 - MGP_LPJ_P0045719 Pdpk1 protein_coding protein_coding MGP_LPJ_T0006981.1 MGP_LPJ_G0005747.1 mouse_genomes_project 17 58299830 58304469 - Gm16712 lincRNA lincRNA MGP_LPJ_T0101951.1 MGP_LPJ_G0039988.1 mouse_genomes_project 17 34864319 34864474 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0045546.1 MGP_LPJ_G0023115.1 mouse_genomes_project 17 18705691 18709792 - MGP_LPJ_P0045546 protein_coding protein_coding MGP_LPJ_T0047146.1 MGP_LPJ_G0023524.1 mouse_genomes_project 17 35542404 35543797 + MGP_LPJ_P0047146 Ly6g6e protein_coding protein_coding MGP_LPJ_T0047147.1 MGP_LPJ_G0023524.1 mouse_genomes_project 17 35542433 35544053 + MGP_LPJ_P0047147 Ly6g6e protein_coding protein_coding MGP_LPJ_T0047148.1 MGP_LPJ_G0023524.1 mouse_genomes_project 17 35542439 35544307 + MGP_LPJ_P0047148 Ly6g6e protein_coding protein_coding MGP_LPJ_T0047149.1 MGP_LPJ_G0023524.1 mouse_genomes_project 17 35542657 35543788 + MGP_LPJ_P0047149 Ly6g6e protein_coding protein_coding MGP_LPJ_T0045602.1 MGP_LPJ_G0023154.1 mouse_genomes_project 17 20852910 20890341 + MGP_LPJ_P0045602 Zfp943 protein_coding protein_coding MGP_LPJ_T0045603.1 MGP_LPJ_G0023154.1 mouse_genomes_project 17 20852917 20888019 + MGP_LPJ_P0045603 Zfp943 protein_coding protein_coding MGP_LPJ_T0045604.1 MGP_LPJ_G0023154.1 mouse_genomes_project 17 20852944 20998957 + MGP_LPJ_P0045604 Zfp943 protein_coding nonsense_mediated_decay MGP_LPJ_T0045605.1 MGP_LPJ_G0023154.1 mouse_genomes_project 17 20903603 20909479 + Zfp943 protein_coding processed_transcript MGP_LPJ_T0047803.1 MGP_LPJ_G0023736.1 mouse_genomes_project 17 48440321 48442109 + MGP_LPJ_P0047803 Mea1 protein_coding protein_coding MGP_LPJ_T0045596.1 MGP_LPJ_G0023151.1 mouse_genomes_project 17 20661709 20779064 - MGP_LPJ_P0045596 protein_coding protein_coding MGP_LPJ_T0045597.1 MGP_LPJ_G0023151.1 mouse_genomes_project 17 20671974 20778777 - protein_coding processed_transcript MGP_LPJ_T0045599.1 MGP_LPJ_G0023151.1 mouse_genomes_project 17 20777173 20779063 - protein_coding retained_intron MGP_LPJ_T0047326.1 MGP_LPJ_G0023566.1 mouse_genomes_project 17 36464493 36484358 + MGP_LPJ_P0047326 Dhx16 protein_coding protein_coding MGP_LPJ_T0047327.1 MGP_LPJ_G0023566.1 mouse_genomes_project 17 36464499 36484313 + MGP_LPJ_P0047327 Dhx16 protein_coding nonsense_mediated_decay MGP_LPJ_T0047328.1 MGP_LPJ_G0023566.1 mouse_genomes_project 17 36472225 36474142 + Dhx16 protein_coding retained_intron MGP_LPJ_T0047329.1 MGP_LPJ_G0023566.1 mouse_genomes_project 17 36472483 36473201 + Dhx16 protein_coding retained_intron MGP_LPJ_T0047330.1 MGP_LPJ_G0023566.1 mouse_genomes_project 17 36472489 36473289 + Dhx16 protein_coding retained_intron MGP_LPJ_T0047331.1 MGP_LPJ_G0023566.1 mouse_genomes_project 17 36472573 36474040 + Dhx16 protein_coding retained_intron MGP_LPJ_T0047332.1 MGP_LPJ_G0023566.1 mouse_genomes_project 17 36473828 36484354 + MGP_LPJ_P0047332 Dhx16 protein_coding protein_coding MGP_LPJ_T0047333.1 MGP_LPJ_G0023566.1 mouse_genomes_project 17 36482469 36484241 + Dhx16 protein_coding retained_intron MGP_LPJ_T0047213.1 MGP_LPJ_G0023539.1 mouse_genomes_project 17 35681747 35683862 - MGP_LPJ_P0047213 Lta protein_coding protein_coding MGP_LPJ_T0101972.1 MGP_LPJ_G0040009.1 mouse_genomes_project 17 37433759 37433906 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0047208.1 MGP_LPJ_G0023537.1 mouse_genomes_project 17 35673092 35674956 + MGP_LPJ_P0047208 Ltb protein_coding protein_coding MGP_LPJ_T0047209.1 MGP_LPJ_G0023537.1 mouse_genomes_project 17 35673176 35674959 + Ltb protein_coding retained_intron MGP_LPJ_T0047210.1 MGP_LPJ_G0023537.1 mouse_genomes_project 17 35673279 35674974 + MGP_LPJ_P0047210 Ltb protein_coding protein_coding MGP_LPJ_T0017536.1 MGP_LPJ_G0015272.1 mouse_genomes_project 17 89611008 89629746 - Six3os1 processed_transcript antisense MGP_LPJ_T0017537.1 MGP_LPJ_G0015272.1 mouse_genomes_project 17 89612291 89632774 - Six3os1 processed_transcript antisense MGP_LPJ_T0017538.1 MGP_LPJ_G0015272.1 mouse_genomes_project 17 89617594 89632767 - Six3os1 processed_transcript antisense MGP_LPJ_T0017539.1 MGP_LPJ_G0015272.1 mouse_genomes_project 17 89618161 89632800 - Six3os1 processed_transcript antisense MGP_LPJ_T0017540.1 MGP_LPJ_G0015272.1 mouse_genomes_project 17 89620116 89632742 - Six3os1 processed_transcript antisense MGP_LPJ_T0017541.1 MGP_LPJ_G0015272.1 mouse_genomes_project 17 89621058 89632677 - Six3os1 processed_transcript antisense MGP_LPJ_T0017542.1 MGP_LPJ_G0015272.1 mouse_genomes_project 17 89621803 89632787 - Six3os1 processed_transcript retained_intron MGP_LPJ_T0017543.1 MGP_LPJ_G0015272.1 mouse_genomes_project 17 89622186 89632625 - Six3os1 processed_transcript antisense MGP_LPJ_T0017544.1 MGP_LPJ_G0015272.1 mouse_genomes_project 17 89622186 89632623 - Six3os1 processed_transcript antisense MGP_LPJ_T0017545.1 MGP_LPJ_G0015272.1 mouse_genomes_project 17 89623439 89632677 - Six3os1 processed_transcript antisense MGP_LPJ_T0017546.1 MGP_LPJ_G0015272.1 mouse_genomes_project 17 89623767 89630644 - Six3os1 processed_transcript antisense MGP_LPJ_T0017547.1 MGP_LPJ_G0015272.1 mouse_genomes_project 17 89624730 89632475 - Six3os1 processed_transcript antisense MGP_LPJ_T0017548.1 MGP_LPJ_G0015272.1 mouse_genomes_project 17 89624731 89632760 - Six3os1 processed_transcript antisense MGP_LPJ_T0048445.1 MGP_LPJ_G0023952.1 mouse_genomes_project 17 82536842 82568752 - MGP_LPJ_P0048445 Eif2ak2 protein_coding protein_coding MGP_LPJ_T0048446.1 MGP_LPJ_G0023952.1 mouse_genomes_project 17 82539619 82543251 - Eif2ak2 protein_coding processed_transcript MGP_LPJ_T0048447.1 MGP_LPJ_G0023952.1 mouse_genomes_project 17 82559749 82568727 - Eif2ak2 protein_coding processed_transcript MGP_LPJ_T0048448.1 MGP_LPJ_G0023952.1 mouse_genomes_project 17 82564130 82568733 - Eif2ak2 protein_coding processed_transcript MGP_LPJ_T0047763.1 MGP_LPJ_G0023723.1 mouse_genomes_project 17 48169124 48171961 + MGP_LPJ_P0047763 Crip3 protein_coding protein_coding MGP_LPJ_T0047764.1 MGP_LPJ_G0023723.1 mouse_genomes_project 17 48169140 48171762 + Crip3 protein_coding retained_intron MGP_LPJ_T0047765.1 MGP_LPJ_G0023723.1 mouse_genomes_project 17 48169140 48171956 + MGP_LPJ_P0047765 Crip3 protein_coding protein_coding MGP_LPJ_T0047766.1 MGP_LPJ_G0023723.1 mouse_genomes_project 17 48169149 48171600 + MGP_LPJ_P0047766 Crip3 protein_coding protein_coding MGP_LPJ_T0047767.1 MGP_LPJ_G0023723.1 mouse_genomes_project 17 48169168 48170670 + Crip3 protein_coding processed_transcript MGP_LPJ_T0047768.1 MGP_LPJ_G0023723.1 mouse_genomes_project 17 48170859 48171907 + Crip3 protein_coding retained_intron MGP_LPJ_T0047769.1 MGP_LPJ_G0023723.1 mouse_genomes_project 17 48171149 48171882 + Crip3 protein_coding retained_intron MGP_LPJ_T0048442.1 MGP_LPJ_G0023950.1 mouse_genomes_project 17 82518437 82531170 + MGP_LPJ_P0048442 Gpatch11 protein_coding protein_coding MGP_LPJ_T0046526.1 MGP_LPJ_G0023383.1 mouse_genomes_project 17 30473447 30494374 - MGP_LPJ_P0046526 Glo1 protein_coding protein_coding MGP_LPJ_T0046527.1 MGP_LPJ_G0023383.1 mouse_genomes_project 17 30475230 30494266 - MGP_LPJ_P0046527 Glo1 protein_coding protein_coding MGP_LPJ_T0048174.1 MGP_LPJ_G0023864.1 mouse_genomes_project 17 59542092 59555945 - MGP_LPJ_P0048174 protein_coding protein_coding MGP_LPJ_T0045412.1 MGP_LPJ_G0023064.1 mouse_genomes_project 17 10507279 10538729 - MGP_LPJ_P0045412 protein_coding protein_coding MGP_LPJ_T0045413.1 MGP_LPJ_G0023064.1 mouse_genomes_project 17 10507282 10538491 - MGP_LPJ_P0045413 protein_coding protein_coding MGP_LPJ_T0045414.1 MGP_LPJ_G0023064.1 mouse_genomes_project 17 10523518 10529902 - MGP_LPJ_P0045414 protein_coding protein_coding MGP_LPJ_T0045415.1 MGP_LPJ_G0023064.1 mouse_genomes_project 17 10525438 10527633 - protein_coding processed_transcript MGP_LPJ_T0046194.1 MGP_LPJ_G0023306.1 mouse_genomes_project 17 25852696 25881736 + MGP_LPJ_P0046194 Neurl1b protein_coding protein_coding MGP_LPJ_T0046195.1 MGP_LPJ_G0023306.1 mouse_genomes_project 17 25852696 25881736 + MGP_LPJ_P0046195 Neurl1b protein_coding protein_coding MGP_LPJ_T0046196.1 MGP_LPJ_G0023306.1 mouse_genomes_project 17 25852777 25886228 + MGP_LPJ_P0046196 Neurl1b protein_coding protein_coding MGP_LPJ_T0048104.1 MGP_LPJ_G0023836.1 mouse_genomes_project 17 58897326 58898562 - MGP_LPJ_P0048104 Znrf4 protein_coding protein_coding MGP_LPJ_T0013206.1 MGP_LPJ_G0011297.1 mouse_genomes_project 17 12743977 12744716 + processed_pseudogene processed_pseudogene MGP_LPJ_T0047737.1 MGP_LPJ_G0023717.1 mouse_genomes_project 17 47972217 47976675 + MGP_LPJ_P0047737 Yipf3 protein_coding protein_coding MGP_LPJ_T0047738.1 MGP_LPJ_G0023717.1 mouse_genomes_project 17 47972262 47975626 + MGP_LPJ_P0047738 Yipf3 protein_coding protein_coding MGP_LPJ_T0047739.1 MGP_LPJ_G0023717.1 mouse_genomes_project 17 47972282 47976139 + Yipf3 protein_coding retained_intron MGP_LPJ_T0047740.1 MGP_LPJ_G0023717.1 mouse_genomes_project 17 47973166 47976042 + MGP_LPJ_P0047740 Yipf3 protein_coding protein_coding MGP_LPJ_T0047741.1 MGP_LPJ_G0023717.1 mouse_genomes_project 17 47974226 47975131 + Yipf3 protein_coding processed_transcript MGP_LPJ_T0047742.1 MGP_LPJ_G0023717.1 mouse_genomes_project 17 47975478 47976155 + Yipf3 protein_coding processed_transcript MGP_LPJ_T0047539.1 MGP_LPJ_G0023647.1 mouse_genomes_project 17 39213752 39214831 + MGP_LPJ_P0047539 Olfr135 protein_coding protein_coding MGP_LPJ_T0047787.1 MGP_LPJ_G0023731.1 mouse_genomes_project 17 48386267 48403664 - MGP_LPJ_P0047787 Klc4 protein_coding unknown_likely_coding MGP_LPJ_T0047788.1 MGP_LPJ_G0023731.1 mouse_genomes_project 17 48386279 48402733 - MGP_LPJ_P0047788 Klc4 protein_coding protein_coding MGP_LPJ_T0046612.1 MGP_LPJ_G0023406.1 mouse_genomes_project 17 32226771 32235207 - MGP_LPJ_P0046612 Ephx3 protein_coding protein_coding MGP_LPJ_T0046613.1 MGP_LPJ_G0023406.1 mouse_genomes_project 17 32230508 32235293 - MGP_LPJ_P0046613 Ephx3 protein_coding protein_coding MGP_LPJ_T0048614.1 MGP_LPJ_G0024021.1 mouse_genomes_project 17 92730048 92780409 + MGP_LPJ_P0048614 Foxn2 protein_coding protein_coding MGP_LPJ_T0048615.1 MGP_LPJ_G0024021.1 mouse_genomes_project 17 92730137 92751810 + MGP_LPJ_P0048615 Foxn2 protein_coding protein_coding MGP_LPJ_T0048616.1 MGP_LPJ_G0024021.1 mouse_genomes_project 17 92730160 92768181 + Foxn2 protein_coding retained_intron MGP_LPJ_T0048617.1 MGP_LPJ_G0024021.1 mouse_genomes_project 17 92730177 92777122 + MGP_LPJ_P0048617 Foxn2 protein_coding nonsense_mediated_decay MGP_LPJ_T0047597.1 MGP_LPJ_G0023686.1 mouse_genomes_project 17 45179527 45196166 - MGP_LPJ_P0047597 Tdrd6 protein_coding protein_coding MGP_LPJ_T0047598.1 MGP_LPJ_G0023686.1 mouse_genomes_project 17 45179531 45196166 - MGP_LPJ_P0047598 Tdrd6 protein_coding protein_coding MGP_LPJ_T0047599.1 MGP_LPJ_G0023686.1 mouse_genomes_project 17 45179751 45184660 - Tdrd6 protein_coding processed_transcript MGP_LPJ_T0047600.1 MGP_LPJ_G0023686.1 mouse_genomes_project 17 45180037 45196022 - MGP_LPJ_P0047600 Tdrd6 protein_coding unknown_likely_coding MGP_LPJ_T0047115.1 MGP_LPJ_G0023517.1 mouse_genomes_project 17 35487486 35488955 - Sapcd1 protein_coding retained_intron MGP_LPJ_T0047116.1 MGP_LPJ_G0023517.1 mouse_genomes_project 17 35487486 35489210 - MGP_LPJ_P0047116 Sapcd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0047117.1 MGP_LPJ_G0023517.1 mouse_genomes_project 17 35487500 35489312 - MGP_LPJ_P0047117 Sapcd1 protein_coding protein_coding MGP_LPJ_T0047118.1 MGP_LPJ_G0023517.1 mouse_genomes_project 17 35487788 35489312 - MGP_LPJ_P0047118 Sapcd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0046815.1 MGP_LPJ_G0023456.1 mouse_genomes_project 17 34174522 34176091 - MGP_LPJ_P0046815 B3galt4 protein_coding protein_coding MGP_LPJ_T0010212.1 MGP_LPJ_G0008330.1 mouse_genomes_project 17 32444368 32444427 + Gm22201 miRNA miRNA MGP_LPJ_T0045372.1 MGP_LPJ_G0023051.1 mouse_genomes_project 17 9573499 9667157 + MGP_LPJ_P0045372 Agpat4 protein_coding protein_coding MGP_LPJ_T0045373.1 MGP_LPJ_G0023051.1 mouse_genomes_project 17 9574102 9676059 + MGP_LPJ_P0045373 Agpat4 protein_coding protein_coding MGP_LPJ_T0045374.1 MGP_LPJ_G0023051.1 mouse_genomes_project 17 9574124 9594549 + Agpat4 protein_coding processed_transcript MGP_LPJ_T0045375.1 MGP_LPJ_G0023051.1 mouse_genomes_project 17 9588099 9666808 + MGP_LPJ_P0045375 Agpat4 protein_coding protein_coding MGP_LPJ_T0045376.1 MGP_LPJ_G0023051.1 mouse_genomes_project 17 9606629 9675507 + MGP_LPJ_P0045376 Agpat4 protein_coding nonsense_mediated_decay MGP_LPJ_T0045377.1 MGP_LPJ_G0023051.1 mouse_genomes_project 17 9671568 9675681 + Agpat4 protein_coding retained_intron MGP_LPJ_T0099236.1 MGP_LPJ_G0037499.1 mouse_genomes_project 17 83769751 83769847 + Gm22215 snRNA snRNA MGP_LPJ_T0046399.1 MGP_LPJ_G0023354.1 mouse_genomes_project 17 28325005 28385658 - MGP_LPJ_P0046399 Slc26a8 protein_coding protein_coding MGP_LPJ_T0046400.1 MGP_LPJ_G0023354.1 mouse_genomes_project 17 28336766 28385658 - Slc26a8 protein_coding retained_intron MGP_LPJ_T0101649.1 MGP_LPJ_G0039706.1 mouse_genomes_project 17 42297608 42313850 + unitary_pseudogene unitary_pseudogene MGP_LPJ_T0010246.1 MGP_LPJ_G0008364.1 mouse_genomes_project 17 95488546 95488607 + Gm27475 miRNA miRNA MGP_LPJ_T0003740.1 MGP_LPJ_G0003372.1 mouse_genomes_project 17 26074261 26078994 - Gm17218 antisense antisense MGP_LPJ_T0045523.1 MGP_LPJ_G0023094.1 mouse_genomes_project 17 15843634 15855500 - MGP_LPJ_P0045523 Has1 protein_coding protein_coding MGP_LPJ_T0046535.1 MGP_LPJ_G0023387.1 mouse_genomes_project 17 31008891 31071800 + MGP_LPJ_P0046535 Abcg1 protein_coding protein_coding MGP_LPJ_T0046536.1 MGP_LPJ_G0023387.1 mouse_genomes_project 17 31008967 31050366 + Abcg1 protein_coding retained_intron MGP_LPJ_T0045533.1 MGP_LPJ_G0023102.1 mouse_genomes_project 17 16054152 16513811 + MGP_LPJ_P0045533 Vmn2r97 protein_coding protein_coding MGP_LPJ_T0048502.1 MGP_LPJ_G0023979.1 mouse_genomes_project 17 85192767 85462099 - MGP_LPJ_P0048502 Slc8a1 protein_coding protein_coding MGP_LPJ_T0048503.1 MGP_LPJ_G0023979.1 mouse_genomes_project 17 85192767 85462099 - MGP_LPJ_P0048503 Slc8a1 protein_coding protein_coding MGP_LPJ_T0048504.1 MGP_LPJ_G0023979.1 mouse_genomes_project 17 85192767 85462099 - MGP_LPJ_P0048504 Slc8a1 protein_coding protein_coding MGP_LPJ_T0048505.1 MGP_LPJ_G0023979.1 mouse_genomes_project 17 85192767 85479209 - MGP_LPJ_P0048505 Slc8a1 protein_coding unknown_likely_coding MGP_LPJ_T0045327.1 MGP_LPJ_G0023039.1 mouse_genomes_project 17 5605923 5622841 + Sft2d1 protein_coding retained_intron MGP_LPJ_T0045328.1 MGP_LPJ_G0023039.1 mouse_genomes_project 17 5605923 5622841 + MGP_LPJ_P0045328 Sft2d1 protein_coding protein_coding MGP_LPJ_T0045329.1 MGP_LPJ_G0023039.1 mouse_genomes_project 17 5605930 5696439 + Sft2d1 protein_coding processed_transcript MGP_LPJ_T0045330.1 MGP_LPJ_G0023039.1 mouse_genomes_project 17 5605943 5622454 + MGP_LPJ_P0045330 Sft2d1 protein_coding nonsense_mediated_decay MGP_LPJ_T0045331.1 MGP_LPJ_G0023039.1 mouse_genomes_project 17 5605960 5622407 + Sft2d1 protein_coding processed_transcript MGP_LPJ_T0045333.1 MGP_LPJ_G0023039.1 mouse_genomes_project 17 5605990 5622839 + MGP_LPJ_P0045333 Sft2d1 protein_coding nonsense_mediated_decay MGP_LPJ_T0045334.1 MGP_LPJ_G0023039.1 mouse_genomes_project 17 5605996 5613030 + Sft2d1 protein_coding retained_intron MGP_LPJ_T0045335.1 MGP_LPJ_G0023039.1 mouse_genomes_project 17 5606044 5622845 + MGP_LPJ_P0045335 Sft2d1 protein_coding unknown_likely_coding MGP_LPJ_T0045336.1 MGP_LPJ_G0023039.1 mouse_genomes_project 17 5613550 5619287 + Sft2d1 protein_coding retained_intron MGP_LPJ_T0045337.1 MGP_LPJ_G0023039.1 mouse_genomes_project 17 5615369 5622461 + Sft2d1 protein_coding retained_intron MGP_LPJ_T0045338.1 MGP_LPJ_G0023039.1 mouse_genomes_project 17 5619209 5622839 + Sft2d1 protein_coding retained_intron MGP_LPJ_T0045563.1 MGP_LPJ_G0023132.1 mouse_genomes_project 17 19606947 19627515 + MGP_LPJ_P0045563 Ppp2r1a protein_coding protein_coding MGP_LPJ_T0045564.1 MGP_LPJ_G0023132.1 mouse_genomes_project 17 19607123 19620379 + MGP_LPJ_P0045564 Ppp2r1a protein_coding nonsense_mediated_decay MGP_LPJ_T0045565.1 MGP_LPJ_G0023132.1 mouse_genomes_project 17 19618178 19620432 + Ppp2r1a protein_coding retained_intron MGP_LPJ_T0045566.1 MGP_LPJ_G0023132.1 mouse_genomes_project 17 19618379 19621104 + MGP_LPJ_P0045566 Ppp2r1a protein_coding protein_coding MGP_LPJ_T0045567.1 MGP_LPJ_G0023132.1 mouse_genomes_project 17 19620335 19622193 + Ppp2r1a protein_coding retained_intron MGP_LPJ_T0045568.1 MGP_LPJ_G0023132.1 mouse_genomes_project 17 19620583 19623537 + Ppp2r1a protein_coding retained_intron MGP_LPJ_T0045569.1 MGP_LPJ_G0023132.1 mouse_genomes_project 17 19622084 19622861 + Ppp2r1a protein_coding retained_intron MGP_LPJ_T0017500.1 MGP_LPJ_G0015259.1 mouse_genomes_project 17 25321309 25339529 + Gm16278 processed_transcript processed_transcript MGP_LPJ_T0048208.1 MGP_LPJ_G0023880.1 mouse_genomes_project 17 66665313 66665805 - MGP_LPJ_P0048208 A930002H24Rik protein_coding protein_coding MGP_LPJ_T0047161.1 MGP_LPJ_G0023529.1 mouse_genomes_project 17 35585331 35591997 - MGP_LPJ_P0047161 Csnk2b protein_coding protein_coding MGP_LPJ_T0047162.1 MGP_LPJ_G0023529.1 mouse_genomes_project 17 35585333 35591854 - MGP_LPJ_P0047162 Csnk2b protein_coding protein_coding MGP_LPJ_T0047163.1 MGP_LPJ_G0023529.1 mouse_genomes_project 17 35585333 35590343 - MGP_LPJ_P0047163 Csnk2b protein_coding protein_coding MGP_LPJ_T0047164.1 MGP_LPJ_G0023529.1 mouse_genomes_project 17 35585335 35591741 - MGP_LPJ_P0047164 Csnk2b protein_coding protein_coding MGP_LPJ_T0047165.1 MGP_LPJ_G0023529.1 mouse_genomes_project 17 35585377 35588640 - MGP_LPJ_P0047165 Csnk2b protein_coding protein_coding MGP_LPJ_T0047166.1 MGP_LPJ_G0023529.1 mouse_genomes_project 17 35588262 35589349 - Csnk2b protein_coding retained_intron MGP_LPJ_T0047167.1 MGP_LPJ_G0023529.1 mouse_genomes_project 17 35588263 35592621 - MGP_LPJ_P0047167 Csnk2b protein_coding protein_coding MGP_LPJ_T0047168.1 MGP_LPJ_G0023529.1 mouse_genomes_project 17 35588562 35591598 - MGP_LPJ_P0047168 Csnk2b protein_coding protein_coding MGP_LPJ_T0047169.1 MGP_LPJ_G0023529.1 mouse_genomes_project 17 35590321 35592566 - MGP_LPJ_P0047169 Csnk2b protein_coding protein_coding MGP_LPJ_T0047170.1 MGP_LPJ_G0023529.1 mouse_genomes_project 17 35591085 35592004 - Csnk2b protein_coding retained_intron MGP_LPJ_T0100469.1 MGP_LPJ_G0038732.1 mouse_genomes_project 17 29815258 29815366 - Gm22327 snoRNA snoRNA MGP_LPJ_T0048495.1 MGP_LPJ_G0023974.1 mouse_genomes_project 17 84285909 84343512 - MGP_LPJ_P0048495 Cdkl4 protein_coding protein_coding MGP_LPJ_T0017507.1 MGP_LPJ_G0015266.1 mouse_genomes_project 17 35211345 35240269 - processed_transcript processed_transcript MGP_LPJ_T0017508.1 MGP_LPJ_G0015266.1 mouse_genomes_project 17 35211345 35227582 - processed_transcript retained_intron MGP_LPJ_T0017509.1 MGP_LPJ_G0015266.1 mouse_genomes_project 17 35211347 35240259 - processed_transcript processed_transcript MGP_LPJ_T0017510.1 MGP_LPJ_G0015266.1 mouse_genomes_project 17 35211347 35240269 - processed_transcript processed_transcript MGP_LPJ_T0017511.1 MGP_LPJ_G0015266.1 mouse_genomes_project 17 35227309 35229215 - processed_transcript retained_intron MGP_LPJ_T0017512.1 MGP_LPJ_G0015266.1 mouse_genomes_project 17 35227790 35229221 - processed_transcript processed_transcript MGP_LPJ_T0017513.1 MGP_LPJ_G0015266.1 mouse_genomes_project 17 35228941 35230625 - processed_transcript processed_transcript MGP_LPJ_T0017514.1 MGP_LPJ_G0015266.1 mouse_genomes_project 17 35229145 35230726 - processed_transcript retained_intron MGP_LPJ_T0017515.1 MGP_LPJ_G0015266.1 mouse_genomes_project 17 35232275 35233577 - processed_transcript retained_intron MGP_LPJ_T0100484.1 MGP_LPJ_G0038747.1 mouse_genomes_project 17 74843036 74843112 + Gm22858 snoRNA snoRNA MGP_LPJ_T0047946.1 MGP_LPJ_G0023779.1 mouse_genomes_project 17 50331983 50337878 + MGP_LPJ_P0047946 Trem2 protein_coding protein_coding MGP_LPJ_T0047947.1 MGP_LPJ_G0023779.1 mouse_genomes_project 17 50332022 50341362 + Trem2 protein_coding retained_intron MGP_LPJ_T0047948.1 MGP_LPJ_G0023779.1 mouse_genomes_project 17 50332070 50337878 + MGP_LPJ_P0047948 Trem2 protein_coding protein_coding MGP_LPJ_T0047949.1 MGP_LPJ_G0023779.1 mouse_genomes_project 17 50332071 50336164 + Trem2 protein_coding processed_transcript MGP_LPJ_T0047921.1 MGP_LPJ_G0023769.1 mouse_genomes_project 17 49755669 49823540 - MGP_LPJ_P0047921 Foxp4 protein_coding protein_coding MGP_LPJ_T0047922.1 MGP_LPJ_G0023769.1 mouse_genomes_project 17 49756300 49823330 - MGP_LPJ_P0047922 Foxp4 protein_coding protein_coding MGP_LPJ_T0047923.1 MGP_LPJ_G0023769.1 mouse_genomes_project 17 49756300 49823295 - MGP_LPJ_P0047923 Foxp4 protein_coding protein_coding MGP_LPJ_T0047924.1 MGP_LPJ_G0023769.1 mouse_genomes_project 17 49756304 49823371 - MGP_LPJ_P0047924 Foxp4 protein_coding protein_coding MGP_LPJ_T0047925.1 MGP_LPJ_G0023769.1 mouse_genomes_project 17 49768237 49778390 - Foxp4 protein_coding processed_transcript MGP_LPJ_T0047926.1 MGP_LPJ_G0023769.1 mouse_genomes_project 17 49768432 49768906 - Foxp4 protein_coding retained_intron MGP_LPJ_T0047927.1 MGP_LPJ_G0023769.1 mouse_genomes_project 17 49770296 49778107 - Foxp4 protein_coding retained_intron MGP_LPJ_T0047928.1 MGP_LPJ_G0023769.1 mouse_genomes_project 17 49777849 49823321 - Foxp4 protein_coding retained_intron MGP_LPJ_T0010215.1 MGP_LPJ_G0008333.1 mouse_genomes_project 17 34277342 34277402 + Mir219c miRNA miRNA MGP_LPJ_T0048517.1 MGP_LPJ_G0023985.1 mouse_genomes_project 17 87424054 87478299 - MGP_LPJ_P0048517 Kcng3 protein_coding protein_coding MGP_LPJ_T0047528.1 MGP_LPJ_G0023639.1 mouse_genomes_project 17 38886382 38887430 + MGP_LPJ_P0047528 protein_coding protein_coding MGP_LPJ_T0045422.1 MGP_LPJ_G0023069.1 mouse_genomes_project 17 11162928 11181146 + MGP_LPJ_P0045422 protein_coding protein_coding MGP_LPJ_T0047491.1 MGP_LPJ_G0023606.1 mouse_genomes_project 17 38077443 38078345 - MGP_LPJ_P0047491 protein_coding protein_coding MGP_LPJ_T0100483.1 MGP_LPJ_G0038746.1 mouse_genomes_project 17 74842331 74842409 + Snord53 snoRNA snoRNA MGP_LPJ_T0013245.1 MGP_LPJ_G0011336.1 mouse_genomes_project 17 55609910 55611111 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099220.1 MGP_LPJ_G0037483.1 mouse_genomes_project 17 38206472 38206635 - Gm25104 snRNA snRNA MGP_LPJ_T0046490.1 MGP_LPJ_G0023374.1 mouse_genomes_project 17 29326835 29352583 - MGP_LPJ_P0046490 Tmem217 protein_coding protein_coding MGP_LPJ_T0046491.1 MGP_LPJ_G0023374.1 mouse_genomes_project 17 29326835 29352583 - MGP_LPJ_P0046491 Tmem217 protein_coding protein_coding MGP_LPJ_T0013263.1 MGP_LPJ_G0011354.1 mouse_genomes_project 17 76482503 76483175 - processed_pseudogene processed_pseudogene MGP_LPJ_T0048100.1 MGP_LPJ_G0023835.1 mouse_genomes_project 17 58791190 58842056 - MGP_LPJ_P0048100 Ptprs protein_coding protein_coding MGP_LPJ_T0048101.1 MGP_LPJ_G0023835.1 mouse_genomes_project 17 58791192 58858531 - MGP_LPJ_P0048101 Ptprs protein_coding protein_coding MGP_LPJ_T0048102.1 MGP_LPJ_G0023835.1 mouse_genomes_project 17 58800995 58858417 - Ptprs protein_coding processed_transcript MGP_LPJ_T0048103.1 MGP_LPJ_G0023835.1 mouse_genomes_project 17 58803771 58858494 - MGP_LPJ_P0048103 Ptprs protein_coding unknown_likely_coding MGP_LPJ_T0047357.1 MGP_LPJ_G0023569.1 mouse_genomes_project 17 36501837 36507667 - MGP_LPJ_P0047357 Mrps18b protein_coding protein_coding MGP_LPJ_T0047358.1 MGP_LPJ_G0023569.1 mouse_genomes_project 17 36501837 36507667 - MGP_LPJ_P0047358 Mrps18b protein_coding protein_coding MGP_LPJ_T0047359.1 MGP_LPJ_G0023569.1 mouse_genomes_project 17 36501844 36507608 - MGP_LPJ_P0047359 Mrps18b protein_coding protein_coding MGP_LPJ_T0047360.1 MGP_LPJ_G0023569.1 mouse_genomes_project 17 36501961 36504026 - Mrps18b protein_coding retained_intron MGP_LPJ_T0047361.1 MGP_LPJ_G0023569.1 mouse_genomes_project 17 36502309 36507615 - MGP_LPJ_P0047361 Mrps18b protein_coding protein_coding MGP_LPJ_T0047362.1 MGP_LPJ_G0023569.1 mouse_genomes_project 17 36502899 36507601 - MGP_LPJ_P0047362 Mrps18b protein_coding protein_coding MGP_LPJ_T0047363.1 MGP_LPJ_G0023569.1 mouse_genomes_project 17 36505250 36507655 - Mrps18b protein_coding retained_intron MGP_LPJ_T0047364.1 MGP_LPJ_G0023569.1 mouse_genomes_project 17 36506022 36507481 - Mrps18b protein_coding processed_transcript MGP_LPJ_T0047495.1 MGP_LPJ_G0023610.1 mouse_genomes_project 17 38162146 38163197 + MGP_LPJ_P0047495 Olfr96 protein_coding protein_coding MGP_LPJ_T0046611.1 MGP_LPJ_G0023405.1 mouse_genomes_project 17 32161312 32208841 - MGP_LPJ_P0046611 Notch3 protein_coding protein_coding MGP_LPJ_T0046838.1 MGP_LPJ_G0023461.1 mouse_genomes_project 17 34273122 34277011 - MGP_LPJ_P0046838 Ring1 protein_coding protein_coding MGP_LPJ_T0046839.1 MGP_LPJ_G0023461.1 mouse_genomes_project 17 34273414 34276263 - Ring1 protein_coding retained_intron MGP_LPJ_T0046840.1 MGP_LPJ_G0023461.1 mouse_genomes_project 17 34276521 34276983 - Ring1 protein_coding retained_intron MGP_LPJ_T0047636.1 MGP_LPJ_G0023700.1 mouse_genomes_project 17 47220867 47228361 + MGP_LPJ_P0047636 Nfkbie protein_coding protein_coding MGP_LPJ_T0006929.1 MGP_LPJ_G0005709.1 mouse_genomes_project 17 26702528 26704568 + Gm26724 lincRNA lincRNA MGP_LPJ_T0045536.1 MGP_LPJ_G0023105.1 mouse_genomes_project 17 16272394 16328271 - MGP_LPJ_P0045536 Vmn2r94 protein_coding protein_coding MGP_LPJ_T0047390.1 MGP_LPJ_G0023574.1 mouse_genomes_project 17 36602968 36610719 - MGP_LPJ_P0047390 H2-T24 protein_coding protein_coding MGP_LPJ_T0047391.1 MGP_LPJ_G0023574.1 mouse_genomes_project 17 36603542 36610684 - MGP_LPJ_P0047391 H2-T24 protein_coding protein_coding MGP_LPJ_T0101970.1 MGP_LPJ_G0040007.1 mouse_genomes_project 17 37381122 37381348 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0048279.1 MGP_LPJ_G0023903.1 mouse_genomes_project 17 71313363 71493819 + L3mbtl4 protein_coding retained_intron MGP_LPJ_T0048280.1 MGP_LPJ_G0023903.1 mouse_genomes_project 17 71313363 71675740 + MGP_LPJ_P0048280 L3mbtl4 protein_coding nonsense_mediated_decay MGP_LPJ_T0048281.1 MGP_LPJ_G0023903.1 mouse_genomes_project 17 71313363 71687118 + MGP_LPJ_P0048281 L3mbtl4 protein_coding protein_coding MGP_LPJ_T0048282.1 MGP_LPJ_G0023903.1 mouse_genomes_project 17 71313363 71826308 + MGP_LPJ_P0048282 L3mbtl4 protein_coding protein_coding MGP_LPJ_T0010200.1 MGP_LPJ_G0008318.1 mouse_genomes_project 17 26386725 26386783 + Gm27740 miRNA miRNA MGP_LPJ_T0010210.1 MGP_LPJ_G0008328.1 mouse_genomes_project 17 29398196 29398259 + Mir7667 miRNA miRNA MGP_LPJ_T0006996.1 MGP_LPJ_G0005757.1 mouse_genomes_project 17 83057395 83060723 + Gm17315 lincRNA lincRNA MGP_LPJ_T0046688.1 MGP_LPJ_G0023430.1 mouse_genomes_project 17 33257956 33262058 - MGP_LPJ_P0046688 Morc2b protein_coding protein_coding MGP_LPJ_T0046689.1 MGP_LPJ_G0023430.1 mouse_genomes_project 17 33258011 33261874 - MGP_LPJ_P0046689 Morc2b protein_coding protein_coding MGP_LPJ_T0047231.1 MGP_LPJ_G0023545.1 mouse_genomes_project 17 35811264 35816007 + MGP_LPJ_P0047231 H2-Q1 protein_coding protein_coding MGP_LPJ_T0001031.1 MGP_LPJ_G0000956.1 mouse_genomes_project 17 92823248 92823429 + TEC TEC MGP_LPJ_T0001023.1 MGP_LPJ_G0000948.1 mouse_genomes_project 17 54043878 54047132 + TEC TEC MGP_LPJ_T0045819.1 MGP_LPJ_G0023216.1 mouse_genomes_project 17 23943603 23949744 + MGP_LPJ_P0045819 Nthl1 protein_coding protein_coding MGP_LPJ_T0003768.1 MGP_LPJ_G0003393.1 mouse_genomes_project 17 36217456 36225956 + Gm20483 antisense antisense MGP_LPJ_T0048248.1 MGP_LPJ_G0023893.1 mouse_genomes_project 17 68968143 68990589 - MGP_LPJ_P0048248 Ndufv2 protein_coding protein_coding MGP_LPJ_T0048249.1 MGP_LPJ_G0023893.1 mouse_genomes_project 17 68968151 68990619 - MGP_LPJ_P0048249 Ndufv2 protein_coding protein_coding MGP_LPJ_T0048250.1 MGP_LPJ_G0023893.1 mouse_genomes_project 17 68976554 68990633 - MGP_LPJ_P0048250 Ndufv2 protein_coding protein_coding MGP_LPJ_T0101986.1 MGP_LPJ_G0040023.1 mouse_genomes_project 17 38357284 38358211 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0006958.1 MGP_LPJ_G0005733.1 mouse_genomes_project 17 36338363 36350514 + 4833427F10Rik lincRNA lincRNA MGP_LPJ_T0006908.1 MGP_LPJ_G0005691.1 mouse_genomes_project 17 6488859 6510324 - 6530411M01Rik lincRNA lincRNA MGP_LPJ_T0045667.1 MGP_LPJ_G0023177.1 mouse_genomes_project 17 22922362 22945138 - MGP_LPJ_P0045667 Flywch1 protein_coding unknown_likely_coding MGP_LPJ_T0045668.1 MGP_LPJ_G0023177.1 mouse_genomes_project 17 22926116 22945102 - MGP_LPJ_P0045668 Flywch1 protein_coding protein_coding MGP_LPJ_T0045669.1 MGP_LPJ_G0023177.1 mouse_genomes_project 17 22926125 22937482 - MGP_LPJ_P0045669 Flywch1 protein_coding protein_coding MGP_LPJ_T0047087.1 MGP_LPJ_G0023512.1 mouse_genomes_project 17 35424689 35427414 - MGP_LPJ_P0047087 Hspa1a protein_coding protein_coding MGP_LPJ_T0101966.1 MGP_LPJ_G0040003.1 mouse_genomes_project 17 37239866 37241975 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0048061.1 MGP_LPJ_G0023818.1 mouse_genomes_project 17 58388546 58417079 + MGP_LPJ_P0048061 Chaf1a protein_coding protein_coding MGP_LPJ_T0101976.1 MGP_LPJ_G0040013.1 mouse_genomes_project 17 37613345 37613673 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0046528.1 MGP_LPJ_G0023384.1 mouse_genomes_project 17 30509356 30810234 + MGP_LPJ_P0046528 Dnah8 protein_coding protein_coding MGP_LPJ_T0046529.1 MGP_LPJ_G0023384.1 mouse_genomes_project 17 30519415 30811430 + MGP_LPJ_P0046529 Dnah8 protein_coding unknown_likely_coding MGP_LPJ_T0046530.1 MGP_LPJ_G0023384.1 mouse_genomes_project 17 30519415 30810239 + MGP_LPJ_P0046530 Dnah8 protein_coding unknown_likely_coding MGP_LPJ_T0003780.1 MGP_LPJ_G0003402.1 mouse_genomes_project 17 46347985 46351684 + Runx2os2 antisense antisense MGP_LPJ_T0045874.1 MGP_LPJ_G0023237.1 mouse_genomes_project 17 24222745 24269874 - MGP_LPJ_P0045874 Mapk8ip3 protein_coding nonsense_mediated_decay MGP_LPJ_T0045889.1 MGP_LPJ_G0023237.1 mouse_genomes_project 17 24228108 24269913 - MGP_LPJ_P0045889 Mapk8ip3 protein_coding protein_coding MGP_LPJ_T0045890.1 MGP_LPJ_G0023237.1 mouse_genomes_project 17 24228108 24269913 - MGP_LPJ_P0045890 Mapk8ip3 protein_coding protein_coding MGP_LPJ_T0045891.1 MGP_LPJ_G0023237.1 mouse_genomes_project 17 24228135 24269848 - MGP_LPJ_P0045891 Mapk8ip3 protein_coding protein_coding MGP_LPJ_T0045892.1 MGP_LPJ_G0023237.1 mouse_genomes_project 17 24228135 24269903 - MGP_LPJ_P0045892 Mapk8ip3 protein_coding protein_coding MGP_LPJ_T0045893.1 MGP_LPJ_G0023237.1 mouse_genomes_project 17 24228135 24269904 - MGP_LPJ_P0045893 Mapk8ip3 protein_coding protein_coding MGP_LPJ_T0045894.1 MGP_LPJ_G0023237.1 mouse_genomes_project 17 24228135 24269830 - MGP_LPJ_P0045894 Mapk8ip3 protein_coding protein_coding MGP_LPJ_T0045895.1 MGP_LPJ_G0023237.1 mouse_genomes_project 17 24228136 24269865 - MGP_LPJ_P0045895 Mapk8ip3 protein_coding protein_coding MGP_LPJ_T0045896.1 MGP_LPJ_G0023237.1 mouse_genomes_project 17 24229210 24230320 - Mapk8ip3 protein_coding retained_intron MGP_LPJ_T0045897.1 MGP_LPJ_G0023237.1 mouse_genomes_project 17 24229401 24269896 - MGP_LPJ_P0045897 Mapk8ip3 protein_coding protein_coding MGP_LPJ_T0045898.1 MGP_LPJ_G0023237.1 mouse_genomes_project 17 24229550 24269904 - MGP_LPJ_P0045898 Mapk8ip3 protein_coding protein_coding MGP_LPJ_T0045899.1 MGP_LPJ_G0023237.1 mouse_genomes_project 17 24230266 24231689 - Mapk8ip3 protein_coding retained_intron MGP_LPJ_T0045900.1 MGP_LPJ_G0023237.1 mouse_genomes_project 17 24231146 24232321 - Mapk8ip3 protein_coding retained_intron MGP_LPJ_T0045901.1 MGP_LPJ_G0023237.1 mouse_genomes_project 17 24232420 24233685 - Mapk8ip3 protein_coding retained_intron MGP_LPJ_T0045902.1 MGP_LPJ_G0023237.1 mouse_genomes_project 17 24233293 24233968 - Mapk8ip3 protein_coding retained_intron MGP_LPJ_T0045903.1 MGP_LPJ_G0023237.1 mouse_genomes_project 17 24236572 24237831 - Mapk8ip3 protein_coding retained_intron MGP_LPJ_T0045904.1 MGP_LPJ_G0023237.1 mouse_genomes_project 17 24237223 24238842 - Mapk8ip3 protein_coding retained_intron MGP_LPJ_T0045905.1 MGP_LPJ_G0023237.1 mouse_genomes_project 17 24238878 24248703 - Mapk8ip3 protein_coding processed_transcript MGP_LPJ_T0045906.1 MGP_LPJ_G0023237.1 mouse_genomes_project 17 24238968 24255984 - MGP_LPJ_P0045906 Mapk8ip3 protein_coding protein_coding MGP_LPJ_T0045907.1 MGP_LPJ_G0023237.1 mouse_genomes_project 17 24247489 24256327 - Mapk8ip3 protein_coding retained_intron MGP_LPJ_T0045908.1 MGP_LPJ_G0023237.1 mouse_genomes_project 17 24259238 24269881 - Mapk8ip3 protein_coding retained_intron MGP_LPJ_T0048161.1 MGP_LPJ_G0023860.1 mouse_genomes_project 17 59469029 59495931 - MGP_LPJ_P0048161 Slc25a23 protein_coding protein_coding MGP_LPJ_T0048162.1 MGP_LPJ_G0023860.1 mouse_genomes_project 17 59470517 59479918 - MGP_LPJ_P0048162 Slc25a23 protein_coding protein_coding MGP_LPJ_T0048163.1 MGP_LPJ_G0023860.1 mouse_genomes_project 17 59470803 59480921 - MGP_LPJ_P0048163 Slc25a23 protein_coding protein_coding MGP_LPJ_T0048164.1 MGP_LPJ_G0023860.1 mouse_genomes_project 17 59472357 59480674 - MGP_LPJ_P0048164 Slc25a23 protein_coding protein_coding MGP_LPJ_T0048165.1 MGP_LPJ_G0023860.1 mouse_genomes_project 17 59472501 59482478 - MGP_LPJ_P0048165 Slc25a23 protein_coding nonsense_mediated_decay MGP_LPJ_T0048166.1 MGP_LPJ_G0023860.1 mouse_genomes_project 17 59484630 59495887 - Slc25a23 protein_coding retained_intron MGP_LPJ_T0045541.1 MGP_LPJ_G0023110.1 mouse_genomes_project 17 18013725 18048763 + MGP_LPJ_P0045541 Vmn2r101 protein_coding protein_coding MGP_LPJ_T0010220.1 MGP_LPJ_G0008338.1 mouse_genomes_project 17 35673625 35673703 + Mir6973a miRNA miRNA MGP_LPJ_T0048457.1 MGP_LPJ_G0023956.1 mouse_genomes_project 17 82632581 82645362 + MGP_LPJ_P0048457 Ndufaf7 protein_coding protein_coding MGP_LPJ_T0017526.1 MGP_LPJ_G0015269.1 mouse_genomes_project 17 48942087 49140665 + Trerf1 processed_transcript retained_intron MGP_LPJ_T0017527.1 MGP_LPJ_G0015269.1 mouse_genomes_project 17 48942112 49175067 + Trerf1 processed_transcript processed_transcript MGP_LPJ_T0017528.1 MGP_LPJ_G0015269.1 mouse_genomes_project 17 48942112 49172541 + Trerf1 processed_transcript processed_transcript MGP_LPJ_T0017529.1 MGP_LPJ_G0015269.1 mouse_genomes_project 17 48942386 49130174 + Trerf1 processed_transcript retained_intron MGP_LPJ_T0017530.1 MGP_LPJ_G0015269.1 mouse_genomes_project 17 49018512 49130174 + Trerf1 processed_transcript retained_intron MGP_LPJ_T0017531.1 MGP_LPJ_G0015269.1 mouse_genomes_project 17 49104382 49172546 + Trerf1 processed_transcript processed_transcript MGP_LPJ_T0046892.1 MGP_LPJ_G0023471.1 mouse_genomes_project 17 34452771 34454291 - Psmb9 protein_coding retained_intron MGP_LPJ_T0046893.1 MGP_LPJ_G0023471.1 mouse_genomes_project 17 34452774 34458095 - Psmb9 protein_coding retained_intron MGP_LPJ_T0046894.1 MGP_LPJ_G0023471.1 mouse_genomes_project 17 34452907 34458051 - MGP_LPJ_P0046894 Psmb9 protein_coding protein_coding MGP_LPJ_T0046895.1 MGP_LPJ_G0023471.1 mouse_genomes_project 17 34454771 34458080 - Psmb9 protein_coding retained_intron MGP_LPJ_T0046896.1 MGP_LPJ_G0023471.1 mouse_genomes_project 17 34455023 34457961 - MGP_LPJ_P0046896 Psmb9 protein_coding protein_coding MGP_LPJ_T0046489.1 MGP_LPJ_G0023373.1 mouse_genomes_project 17 29318764 29319274 - MGP_LPJ_P0046489 Gm17657 protein_coding protein_coding MGP_LPJ_T0010207.1 MGP_LPJ_G0008325.1 mouse_genomes_project 17 26897577 26897636 + Mir7218 miRNA miRNA MGP_LPJ_T0046691.1 MGP_LPJ_G0023432.1 mouse_genomes_project 17 33372907 33373944 - MGP_LPJ_P0046691 protein_coding protein_coding MGP_LPJ_T0098204.1 MGP_LPJ_G0036485.1 mouse_genomes_project 17 87825040 87825149 + Gm23905 rRNA rRNA MGP_LPJ_T0017503.1 MGP_LPJ_G0015262.1 mouse_genomes_project 17 33834315 33849261 + Gm20507 processed_transcript processed_transcript MGP_LPJ_T0101924.1 MGP_LPJ_G0039961.1 mouse_genomes_project 17 17863890 17865088 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0001017.1 MGP_LPJ_G0000942.1 mouse_genomes_project 17 53943689 53946841 - TEC TEC MGP_LPJ_T0048020.1 MGP_LPJ_G0023797.1 mouse_genomes_project 17 55738636 55766823 + MGP_LPJ_P0048020 Rab5a protein_coding protein_coding MGP_LPJ_T0047514.1 MGP_LPJ_G0023625.1 mouse_genomes_project 17 38560162 38561157 - MGP_LPJ_P0047514 Olfr113 protein_coding protein_coding MGP_LPJ_T0045581.1 MGP_LPJ_G0023141.1 mouse_genomes_project 17 20182461 20202631 + MGP_LPJ_P0045581 Zfp51 protein_coding protein_coding MGP_LPJ_T0013204.1 MGP_LPJ_G0011295.1 mouse_genomes_project 17 10503216 10503639 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010221.1 MGP_LPJ_G0008339.1 mouse_genomes_project 17 35683057 35683140 - Mir6974 miRNA miRNA MGP_LPJ_T0048000.1 MGP_LPJ_G0023792.1 mouse_genomes_project 17 52651776 52830515 + MGP_LPJ_P0048000 Plcl2 protein_coding protein_coding MGP_LPJ_T0045451.1 MGP_LPJ_G0023076.1 mouse_genomes_project 17 12626116 12735506 - MGP_LPJ_P0045451 Wdr27 protein_coding protein_coding MGP_LPJ_T0045452.1 MGP_LPJ_G0023076.1 mouse_genomes_project 17 12671946 12735506 - MGP_LPJ_P0045452 Wdr27 protein_coding unknown_likely_coding MGP_LPJ_T0010216.1 MGP_LPJ_G0008334.1 mouse_genomes_project 17 35147909 35147976 - Gm27471 miRNA miRNA MGP_LPJ_T0047535.1 MGP_LPJ_G0023644.1 mouse_genomes_project 17 39130348 39131290 - MGP_LPJ_P0047535 Olfr132 protein_coding protein_coding MGP_LPJ_T0045550.1 MGP_LPJ_G0023119.1 mouse_genomes_project 17 19054818 19055715 + MGP_LPJ_P0045550 Vmn1r224 protein_coding protein_coding MGP_LPJ_T0047775.1 MGP_LPJ_G0023728.1 mouse_genomes_project 17 48244948 48245446 - Cul9 protein_coding retained_intron MGP_LPJ_T0047776.1 MGP_LPJ_G0023728.1 mouse_genomes_project 17 48244981 48293789 - MGP_LPJ_P0047776 Cul9 protein_coding protein_coding MGP_LPJ_T0047777.1 MGP_LPJ_G0023728.1 mouse_genomes_project 17 48244986 48265814 - Cul9 protein_coding retained_intron MGP_LPJ_T0047778.1 MGP_LPJ_G0023728.1 mouse_genomes_project 17 48244992 48293702 - Cul9 protein_coding retained_intron MGP_LPJ_T0047779.1 MGP_LPJ_G0023728.1 mouse_genomes_project 17 48246172 48270939 - Cul9 protein_coding retained_intron MGP_LPJ_T0047780.1 MGP_LPJ_G0023728.1 mouse_genomes_project 17 48263545 48267789 - Cul9 protein_coding retained_intron MGP_LPJ_T0047781.1 MGP_LPJ_G0023728.1 mouse_genomes_project 17 48264608 48265720 - Cul9 protein_coding retained_intron MGP_LPJ_T0047782.1 MGP_LPJ_G0023728.1 mouse_genomes_project 17 48264608 48270297 - Cul9 protein_coding retained_intron MGP_LPJ_T0047783.1 MGP_LPJ_G0023728.1 mouse_genomes_project 17 48273545 48282493 - Cul9 protein_coding retained_intron MGP_LPJ_T0047784.1 MGP_LPJ_G0023728.1 mouse_genomes_project 17 48276115 48282753 - Cul9 protein_coding retained_intron MGP_LPJ_T0101959.1 MGP_LPJ_G0039996.1 mouse_genomes_project 17 36703396 36703624 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0045584.1 MGP_LPJ_G0023144.1 mouse_genomes_project 17 20310254 20332199 + MGP_LPJ_P0045584 Zfp948 protein_coding protein_coding MGP_LPJ_T0046488.1 MGP_LPJ_G0023372.1 mouse_genomes_project 17 29286691 29292832 + MGP_LPJ_P0046488 Pim1 protein_coding protein_coding MGP_LPJ_T0047475.1 MGP_LPJ_G0023601.1 mouse_genomes_project 17 37902431 37916908 - MGP_LPJ_P0047475 Mog protein_coding protein_coding MGP_LPJ_T0047476.1 MGP_LPJ_G0023601.1 mouse_genomes_project 17 37905077 37916709 - MGP_LPJ_P0047476 Mog protein_coding protein_coding MGP_LPJ_T0046992.1 MGP_LPJ_G0023493.1 mouse_genomes_project 17 34966550 34979123 - MGP_LPJ_P0046992 Ppt2 protein_coding protein_coding MGP_LPJ_T0046993.1 MGP_LPJ_G0023493.1 mouse_genomes_project 17 34966551 34979065 - MGP_LPJ_P0046993 Ppt2 protein_coding protein_coding MGP_LPJ_T0046994.1 MGP_LPJ_G0023493.1 mouse_genomes_project 17 34966552 34978836 - MGP_LPJ_P0046994 Ppt2 protein_coding protein_coding MGP_LPJ_T0046995.1 MGP_LPJ_G0023493.1 mouse_genomes_project 17 34967117 34979253 - MGP_LPJ_P0046995 Ppt2 protein_coding protein_coding MGP_LPJ_T0046996.1 MGP_LPJ_G0023493.1 mouse_genomes_project 17 34967117 34979767 - MGP_LPJ_P0046996 Ppt2 protein_coding protein_coding MGP_LPJ_T0046997.1 MGP_LPJ_G0023493.1 mouse_genomes_project 17 34967117 34979213 - MGP_LPJ_P0046997 Ppt2 protein_coding protein_coding MGP_LPJ_T0046998.1 MGP_LPJ_G0023493.1 mouse_genomes_project 17 34967202 34978616 - MGP_LPJ_P0046998 Ppt2 protein_coding protein_coding MGP_LPJ_T0046999.1 MGP_LPJ_G0023493.1 mouse_genomes_project 17 34972849 34980238 - MGP_LPJ_P0046999 Ppt2 protein_coding protein_coding MGP_LPJ_T0047000.1 MGP_LPJ_G0023493.1 mouse_genomes_project 17 34973045 34979114 - MGP_LPJ_P0047000 Ppt2 protein_coding protein_coding MGP_LPJ_T0047001.1 MGP_LPJ_G0023493.1 mouse_genomes_project 17 34978176 34978838 - MGP_LPJ_P0047001 Ppt2 protein_coding protein_coding MGP_LPJ_T0047505.1 MGP_LPJ_G0023618.1 mouse_genomes_project 17 38368747 38369780 + MGP_LPJ_P0047505 Olfr107 protein_coding protein_coding MGP_LPJ_T0045234.1 MGP_LPJ_G0023003.1 mouse_genomes_project 17 640143 680033 - MGP_LPJ_P0045234 Tfb1m protein_coding protein_coding MGP_LPJ_T0045235.1 MGP_LPJ_G0023003.1 mouse_genomes_project 17 640432 680033 - MGP_LPJ_P0045235 Tfb1m protein_coding unknown_likely_coding MGP_LPJ_T0046538.1 MGP_LPJ_G0023389.1 mouse_genomes_project 17 31101057 31104194 - MGP_LPJ_P0046538 Tff2 protein_coding protein_coding MGP_LPJ_T0047843.1 MGP_LPJ_G0023754.1 mouse_genomes_project 17 49232807 49265903 - MGP_LPJ_P0047843 1700001C19Rik protein_coding protein_coding MGP_LPJ_T0047844.1 MGP_LPJ_G0023754.1 mouse_genomes_project 17 49233448 49243173 - MGP_LPJ_P0047844 1700001C19Rik protein_coding protein_coding MGP_LPJ_T0047845.1 MGP_LPJ_G0023754.1 mouse_genomes_project 17 49233456 49234785 - 1700001C19Rik protein_coding processed_transcript MGP_LPJ_T0047846.1 MGP_LPJ_G0023754.1 mouse_genomes_project 17 49233701 49265904 - 1700001C19Rik protein_coding processed_transcript MGP_LPJ_T0045574.1 MGP_LPJ_G0023137.1 mouse_genomes_project 17 20010094 20011215 + MGP_LPJ_P0045574 Vmn1r236 protein_coding protein_coding MGP_LPJ_T0045450.1 MGP_LPJ_G0023075.1 mouse_genomes_project 17 12462068 12490813 - MGP_LPJ_P0045450 Thbs2 protein_coding protein_coding MGP_LPJ_T0101944.1 MGP_LPJ_G0039981.1 mouse_genomes_project 17 34080140 34083057 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0099212.1 MGP_LPJ_G0037475.1 mouse_genomes_project 17 28728346 28728518 - Gm23887 snRNA snRNA MGP_LPJ_T0098007.1 MGP_LPJ_G0036288.1 mouse_genomes_project 17 81830446 81830804 - pseudogene pseudogene MGP_LPJ_T0101988.1 MGP_LPJ_G0040025.1 mouse_genomes_project 17 38376402 38378258 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0048576.1 MGP_LPJ_G0024011.1 mouse_genomes_project 17 91415138 91427978 - MGP_LPJ_P0048576 Mcfd2 protein_coding protein_coding MGP_LPJ_T0048577.1 MGP_LPJ_G0024011.1 mouse_genomes_project 17 91415140 91427947 - MGP_LPJ_P0048577 Mcfd2 protein_coding protein_coding MGP_LPJ_T0048578.1 MGP_LPJ_G0024011.1 mouse_genomes_project 17 91416268 91427923 - MGP_LPJ_P0048578 Mcfd2 protein_coding protein_coding MGP_LPJ_T0048579.1 MGP_LPJ_G0024011.1 mouse_genomes_project 17 91416450 91427938 - MGP_LPJ_P0048579 Mcfd2 protein_coding protein_coding MGP_LPJ_T0048580.1 MGP_LPJ_G0024011.1 mouse_genomes_project 17 91417238 91427917 - MGP_LPJ_P0048580 Mcfd2 protein_coding protein_coding MGP_LPJ_T0048581.1 MGP_LPJ_G0024011.1 mouse_genomes_project 17 91417711 91427923 - MGP_LPJ_P0048581 Mcfd2 protein_coding protein_coding MGP_LPJ_T0048582.1 MGP_LPJ_G0024011.1 mouse_genomes_project 17 91420532 91427906 - Mcfd2 protein_coding processed_transcript MGP_LPJ_T0047558.1 MGP_LPJ_G0023663.1 mouse_genomes_project 17 41957850 41966911 + MGP_LPJ_P0047558 Esp8 protein_coding protein_coding MGP_LPJ_T0013214.1 MGP_LPJ_G0011305.1 mouse_genomes_project 17 31969392 31969812 + processed_pseudogene processed_pseudogene MGP_LPJ_T0048362.1 MGP_LPJ_G0023920.1 mouse_genomes_project 17 74814790 74860814 + MGP_LPJ_P0048362 Wdr43 protein_coding protein_coding MGP_LPJ_T0046421.1 MGP_LPJ_G0023358.1 mouse_genomes_project 17 28585492 28620627 + MGP_LPJ_P0046421 Pnpla1 protein_coding protein_coding MGP_LPJ_T0046422.1 MGP_LPJ_G0023358.1 mouse_genomes_project 17 28585492 28620627 + MGP_LPJ_P0046422 Pnpla1 protein_coding protein_coding MGP_LPJ_T0045341.1 MGP_LPJ_G0023042.1 mouse_genomes_project 17 5736948 5744930 + MGP_LPJ_P0045341 T protein_coding protein_coding MGP_LPJ_T0045342.1 MGP_LPJ_G0023042.1 mouse_genomes_project 17 5737450 5739426 + MGP_LPJ_P0045342 T protein_coding protein_coding MGP_LPJ_T0045343.1 MGP_LPJ_G0023042.1 mouse_genomes_project 17 5737936 5744176 + MGP_LPJ_P0045343 T protein_coding protein_coding MGP_LPJ_T0048094.1 MGP_LPJ_G0023834.1 mouse_genomes_project 17 58694260 58728519 + MGP_LPJ_P0048094 Kdm4b protein_coding protein_coding MGP_LPJ_T0048095.1 MGP_LPJ_G0023834.1 mouse_genomes_project 17 58694272 58781659 + MGP_LPJ_P0048095 Kdm4b protein_coding protein_coding MGP_LPJ_T0048096.1 MGP_LPJ_G0023834.1 mouse_genomes_project 17 58694289 58781654 + MGP_LPJ_P0048096 Kdm4b protein_coding protein_coding MGP_LPJ_T0048097.1 MGP_LPJ_G0023834.1 mouse_genomes_project 17 58749104 58764908 + Kdm4b protein_coding processed_transcript MGP_LPJ_T0048098.1 MGP_LPJ_G0023834.1 mouse_genomes_project 17 58772309 58772578 + Kdm4b protein_coding processed_transcript MGP_LPJ_T0048099.1 MGP_LPJ_G0023834.1 mouse_genomes_project 17 58772712 58781665 + MGP_LPJ_P0048099 Kdm4b protein_coding protein_coding MGP_LPJ_T0048484.1 MGP_LPJ_G0023967.1 mouse_genomes_project 17 83956053 83968465 + MGP_LPJ_P0048484 Ttc39d protein_coding protein_coding MGP_LPJ_T0048485.1 MGP_LPJ_G0023967.1 mouse_genomes_project 17 83966442 83968464 + MGP_LPJ_P0048485 Ttc39d protein_coding protein_coding MGP_LPJ_T0006993.1 MGP_LPJ_G0005754.1 mouse_genomes_project 17 74042298 74583560 + lincRNA lincRNA MGP_LPJ_T0046849.1 MGP_LPJ_G0023463.1 mouse_genomes_project 17 34280597 34284021 - MGP_LPJ_P0046849 Slc39a7 protein_coding protein_coding MGP_LPJ_T0046850.1 MGP_LPJ_G0023463.1 mouse_genomes_project 17 34280599 34283875 - MGP_LPJ_P0046850 Slc39a7 protein_coding protein_coding MGP_LPJ_T0046851.1 MGP_LPJ_G0023463.1 mouse_genomes_project 17 34280603 34283979 - Slc39a7 protein_coding retained_intron MGP_LPJ_T0046852.1 MGP_LPJ_G0023463.1 mouse_genomes_project 17 34282176 34283359 - Slc39a7 protein_coding retained_intron MGP_LPJ_T0046853.1 MGP_LPJ_G0023463.1 mouse_genomes_project 17 34282504 34283987 - MGP_LPJ_P0046853 Slc39a7 protein_coding protein_coding MGP_LPJ_T0046854.1 MGP_LPJ_G0023463.1 mouse_genomes_project 17 34282923 34284013 - Slc39a7 protein_coding processed_transcript MGP_LPJ_T0048237.1 MGP_LPJ_G0023890.1 mouse_genomes_project 17 68719335 68756636 - MGP_LPJ_P0048237 Ralbp1 protein_coding protein_coding MGP_LPJ_T0048238.1 MGP_LPJ_G0023890.1 mouse_genomes_project 17 68719335 68755804 - MGP_LPJ_P0048238 Ralbp1 protein_coding protein_coding MGP_LPJ_T0045474.1 MGP_LPJ_G0023083.1 mouse_genomes_project 17 13224694 13261940 + MGP_LPJ_P0045474 Fam120b protein_coding protein_coding MGP_LPJ_T0047817.1 MGP_LPJ_G0023742.1 mouse_genomes_project 17 48540013 48540786 + MGP_LPJ_P0047817 2310039H08Rik protein_coding protein_coding MGP_LPJ_T0047503.1 MGP_LPJ_G0023617.1 mouse_genomes_project 17 38299642 38300788 - MGP_LPJ_P0047503 Olfr103 protein_coding protein_coding MGP_LPJ_T0047504.1 MGP_LPJ_G0023617.1 mouse_genomes_project 17 38299642 38303643 - MGP_LPJ_P0047504 Olfr103 protein_coding protein_coding MGP_LPJ_T0006943.1 MGP_LPJ_G0005719.1 mouse_genomes_project 17 31563741 31565726 + 4833413E03Rik lincRNA lincRNA MGP_LPJ_T0006944.1 MGP_LPJ_G0005719.1 mouse_genomes_project 17 31564807 31565729 + 4833413E03Rik lincRNA lincRNA MGP_LPJ_T0048199.1 MGP_LPJ_G0023877.1 mouse_genomes_project 17 61488528 61502277 - MGP_LPJ_P0048199 Nudt12 protein_coding protein_coding MGP_LPJ_T0048200.1 MGP_LPJ_G0023877.1 mouse_genomes_project 17 61489015 61492612 - Nudt12 protein_coding retained_intron MGP_LPJ_T0048201.1 MGP_LPJ_G0023877.1 mouse_genomes_project 17 61495299 61502173 - MGP_LPJ_P0048201 Nudt12 protein_coding protein_coding MGP_LPJ_T0046068.1 MGP_LPJ_G0023282.1 mouse_genomes_project 17 25236446 25242833 - MGP_LPJ_P0046068 Rhot2 protein_coding protein_coding MGP_LPJ_T0046069.1 MGP_LPJ_G0023282.1 mouse_genomes_project 17 25236827 25239138 - Rhot2 protein_coding retained_intron MGP_LPJ_T0046070.1 MGP_LPJ_G0023282.1 mouse_genomes_project 17 25236829 25242445 - Rhot2 protein_coding retained_intron MGP_LPJ_T0046071.1 MGP_LPJ_G0023282.1 mouse_genomes_project 17 25237263 25238589 - Rhot2 protein_coding retained_intron MGP_LPJ_T0046072.1 MGP_LPJ_G0023282.1 mouse_genomes_project 17 25238043 25239652 - Rhot2 protein_coding processed_transcript MGP_LPJ_T0046073.1 MGP_LPJ_G0023282.1 mouse_genomes_project 17 25239245 25240044 - Rhot2 protein_coding retained_intron MGP_LPJ_T0046074.1 MGP_LPJ_G0023282.1 mouse_genomes_project 17 25239326 25241127 - Rhot2 protein_coding retained_intron MGP_LPJ_T0046075.1 MGP_LPJ_G0023282.1 mouse_genomes_project 17 25239375 25240096 - Rhot2 protein_coding retained_intron MGP_LPJ_T0046076.1 MGP_LPJ_G0023282.1 mouse_genomes_project 17 25239549 25242288 - Rhot2 protein_coding retained_intron MGP_LPJ_T0046077.1 MGP_LPJ_G0023282.1 mouse_genomes_project 17 25239557 25241133 - Rhot2 protein_coding retained_intron MGP_LPJ_T0046078.1 MGP_LPJ_G0023282.1 mouse_genomes_project 17 25239594 25242300 - Rhot2 protein_coding retained_intron MGP_LPJ_T0046079.1 MGP_LPJ_G0023282.1 mouse_genomes_project 17 25239749 25242399 - MGP_LPJ_P0046079 Rhot2 protein_coding protein_coding MGP_LPJ_T0046080.1 MGP_LPJ_G0023282.1 mouse_genomes_project 17 25240085 25242428 - Rhot2 protein_coding retained_intron MGP_LPJ_T0046081.1 MGP_LPJ_G0023282.1 mouse_genomes_project 17 25240241 25242507 - MGP_LPJ_P0046081 Rhot2 protein_coding protein_coding MGP_LPJ_T0046082.1 MGP_LPJ_G0023282.1 mouse_genomes_project 17 25240245 25242551 - Rhot2 protein_coding processed_transcript MGP_LPJ_T0046083.1 MGP_LPJ_G0023282.1 mouse_genomes_project 17 25240371 25242524 - Rhot2 protein_coding processed_transcript MGP_LPJ_T0046084.1 MGP_LPJ_G0023282.1 mouse_genomes_project 17 25241756 25242512 - Rhot2 protein_coding retained_intron MGP_LPJ_T0003757.1 MGP_LPJ_G0003385.1 mouse_genomes_project 17 34131962 34132990 - BC051226 antisense antisense MGP_LPJ_T0003758.1 MGP_LPJ_G0003385.1 mouse_genomes_project 17 34131965 34132959 - BC051226 antisense antisense MGP_LPJ_T0003759.1 MGP_LPJ_G0003385.1 mouse_genomes_project 17 34132074 34133098 - BC051226 antisense antisense MGP_LPJ_T0006919.1 MGP_LPJ_G0005701.1 mouse_genomes_project 17 21895240 21929015 - Gm16386 lincRNA lincRNA MGP_LPJ_T0047811.1 MGP_LPJ_G0023740.1 mouse_genomes_project 17 48501002 48518404 - MGP_LPJ_P0047811 Cnpy3 protein_coding protein_coding MGP_LPJ_T0047812.1 MGP_LPJ_G0023740.1 mouse_genomes_project 17 48501053 48518387 - MGP_LPJ_P0047812 Cnpy3 protein_coding nonsense_mediated_decay MGP_LPJ_T0047813.1 MGP_LPJ_G0023740.1 mouse_genomes_project 17 48501951 48502906 - Cnpy3 protein_coding retained_intron MGP_LPJ_T0047814.1 MGP_LPJ_G0023740.1 mouse_genomes_project 17 48513278 48518385 - MGP_LPJ_P0047814 Cnpy3 protein_coding protein_coding MGP_LPJ_T0047815.1 MGP_LPJ_G0023740.1 mouse_genomes_project 17 48513510 48518367 - Cnpy3 protein_coding retained_intron MGP_LPJ_T0003791.1 MGP_LPJ_G0003411.1 mouse_genomes_project 17 59466797 59472450 + Gm17168 antisense antisense MGP_LPJ_T0101960.1 MGP_LPJ_G0039997.1 mouse_genomes_project 17 36800838 36878366 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0098203.1 MGP_LPJ_G0036484.1 mouse_genomes_project 17 82543204 82543323 + n-R5s29 rRNA rRNA MGP_LPJ_T0046050.1 MGP_LPJ_G0023276.1 mouse_genomes_project 17 25204399 25216683 + MGP_LPJ_P0046050 Fbxl16 protein_coding protein_coding MGP_LPJ_T0100473.1 MGP_LPJ_G0038736.1 mouse_genomes_project 17 35723487 35723564 + Gm22589 snoRNA snoRNA MGP_LPJ_T0048215.1 MGP_LPJ_G0023883.1 mouse_genomes_project 17 67435548 67595985 + MGP_LPJ_P0048215 Man2a1 protein_coding protein_coding MGP_LPJ_T0048216.1 MGP_LPJ_G0023883.1 mouse_genomes_project 17 67551330 67552713 + Man2a1 protein_coding retained_intron MGP_LPJ_T0048217.1 MGP_LPJ_G0023883.1 mouse_genomes_project 17 67551529 67595713 + MGP_LPJ_P0048217 Man2a1 protein_coding protein_coding MGP_LPJ_T0048194.1 MGP_LPJ_G0023875.1 mouse_genomes_project 17 60194467 60857357 + MGP_LPJ_P0048194 Cntnap5c protein_coding unknown_likely_coding MGP_LPJ_T0048195.1 MGP_LPJ_G0023875.1 mouse_genomes_project 17 60194467 60857357 + MGP_LPJ_P0048195 Cntnap5c protein_coding protein_coding MGP_LPJ_T0046841.1 MGP_LPJ_G0023462.1 mouse_genomes_project 17 34278363 34279429 - H2-Ke6 protein_coding retained_intron MGP_LPJ_T0046842.1 MGP_LPJ_G0023462.1 mouse_genomes_project 17 34278363 34279086 - H2-Ke6 protein_coding retained_intron MGP_LPJ_T0046843.1 MGP_LPJ_G0023462.1 mouse_genomes_project 17 34278363 34280387 - MGP_LPJ_P0046843 H2-Ke6 protein_coding protein_coding MGP_LPJ_T0046844.1 MGP_LPJ_G0023462.1 mouse_genomes_project 17 34278366 34280377 - H2-Ke6 protein_coding retained_intron MGP_LPJ_T0046845.1 MGP_LPJ_G0023462.1 mouse_genomes_project 17 34278487 34279283 - H2-Ke6 protein_coding retained_intron MGP_LPJ_T0046846.1 MGP_LPJ_G0023462.1 mouse_genomes_project 17 34278738 34280194 - H2-Ke6 protein_coding processed_transcript MGP_LPJ_T0046847.1 MGP_LPJ_G0023462.1 mouse_genomes_project 17 34278999 34280391 - MGP_LPJ_P0046847 H2-Ke6 protein_coding protein_coding MGP_LPJ_T0046848.1 MGP_LPJ_G0023462.1 mouse_genomes_project 17 34279244 34280369 - H2-Ke6 protein_coding retained_intron MGP_LPJ_T0045544.1 MGP_LPJ_G0023113.1 mouse_genomes_project 17 18574391 18592821 - MGP_LPJ_P0045544 Vmn2r104 protein_coding protein_coding MGP_LPJ_T0099243.1 MGP_LPJ_G0037506.1 mouse_genomes_project 17 92680492 92680596 - Gm23947 snRNA snRNA MGP_LPJ_T0048275.1 MGP_LPJ_G0023902.1 mouse_genomes_project 17 70854203 71030427 - MGP_LPJ_P0048275 Arhgap28 protein_coding protein_coding MGP_LPJ_T0048276.1 MGP_LPJ_G0023902.1 mouse_genomes_project 17 70857225 70923804 - MGP_LPJ_P0048276 Arhgap28 protein_coding protein_coding MGP_LPJ_T0048277.1 MGP_LPJ_G0023902.1 mouse_genomes_project 17 70874880 70891913 - MGP_LPJ_P0048277 Arhgap28 protein_coding nonsense_mediated_decay MGP_LPJ_T0048278.1 MGP_LPJ_G0023902.1 mouse_genomes_project 17 70887821 70916433 - MGP_LPJ_P0048278 Arhgap28 protein_coding protein_coding MGP_LPJ_T0045983.1 MGP_LPJ_G0023259.1 mouse_genomes_project 17 24720107 24721652 + MGP_LPJ_P0045983 Tpsb2 protein_coding protein_coding MGP_LPJ_T0048571.1 MGP_LPJ_G0024008.1 mouse_genomes_project 17 91137041 91163608 - MGP_LPJ_P0048571 Pigf protein_coding protein_coding MGP_LPJ_T0046064.1 MGP_LPJ_G0023280.1 mouse_genomes_project 17 25232454 25239753 - MGP_LPJ_P0046064 Gm20683 protein_coding nonsense_mediated_decay MGP_LPJ_T0048221.1 MGP_LPJ_G0023886.1 mouse_genomes_project 17 68435574 68470617 - MGP_LPJ_P0048221 Vapa protein_coding protein_coding MGP_LPJ_T0003779.1 MGP_LPJ_G0003401.1 mouse_genomes_project 17 46191166 46192337 + Runx2os3 antisense antisense MGP_LPJ_T0047709.1 MGP_LPJ_G0023712.1 mouse_genomes_project 17 47857585 47865514 - MGP_LPJ_P0047709 Mad2l1bp protein_coding protein_coding MGP_LPJ_T0048150.1 MGP_LPJ_G0023852.1 mouse_genomes_project 17 59309973 59353944 - MGP_LPJ_P0048150 Mllt1 protein_coding protein_coding MGP_LPJ_T0046268.1 MGP_LPJ_G0023328.1 mouse_genomes_project 17 27128217 27138345 + MGP_LPJ_P0046268 protein_coding protein_coding MGP_LPJ_T0046269.1 MGP_LPJ_G0023328.1 mouse_genomes_project 17 27137601 27137721 + MGP_LPJ_P0046269 protein_coding protein_coding MGP_LPJ_T0047638.1 MGP_LPJ_G0023702.1 mouse_genomes_project 17 47232947 47238444 - MGP_LPJ_P0047638 Hsp90ab1 protein_coding protein_coding MGP_LPJ_T0047639.1 MGP_LPJ_G0023702.1 mouse_genomes_project 17 47234030 47234909 - Hsp90ab1 protein_coding retained_intron MGP_LPJ_T0047640.1 MGP_LPJ_G0023702.1 mouse_genomes_project 17 47234190 47238426 - MGP_LPJ_P0047640 Hsp90ab1 protein_coding protein_coding MGP_LPJ_T0047641.1 MGP_LPJ_G0023702.1 mouse_genomes_project 17 47234750 47238428 - MGP_LPJ_P0047641 Hsp90ab1 protein_coding protein_coding MGP_LPJ_T0047642.1 MGP_LPJ_G0023702.1 mouse_genomes_project 17 47235617 47236755 - Hsp90ab1 protein_coding retained_intron MGP_LPJ_T0047643.1 MGP_LPJ_G0023702.1 mouse_genomes_project 17 47235835 47238428 - MGP_LPJ_P0047643 Hsp90ab1 protein_coding nonsense_mediated_decay MGP_LPJ_T0047644.1 MGP_LPJ_G0023702.1 mouse_genomes_project 17 47236190 47238444 - Hsp90ab1 protein_coding retained_intron MGP_LPJ_T0047645.1 MGP_LPJ_G0023702.1 mouse_genomes_project 17 47236710 47237728 - MGP_LPJ_P0047645 Hsp90ab1 protein_coding protein_coding MGP_LPJ_T0047536.1 MGP_LPJ_G0023645.1 mouse_genomes_project 17 39151575 39155057 + MGP_LPJ_P0047536 Olfr133 protein_coding protein_coding MGP_LPJ_T0047537.1 MGP_LPJ_G0023645.1 mouse_genomes_project 17 39154683 39155845 + MGP_LPJ_P0047537 Olfr133 protein_coding protein_coding MGP_LPJ_T0046623.1 MGP_LPJ_G0023409.1 mouse_genomes_project 17 32380651 32411086 - MGP_LPJ_P0046623 Akap8l protein_coding protein_coding MGP_LPJ_T0011446.1 MGP_LPJ_G0009564.1 mouse_genomes_project 17 48778582 48778876 - Gm23657 misc_RNA misc_RNA MGP_LPJ_T0045576.1 MGP_LPJ_G0023139.1 mouse_genomes_project 17 20115604 20129950 + MGP_LPJ_P0045576 Zfp677 protein_coding protein_coding MGP_LPJ_T0045577.1 MGP_LPJ_G0023139.1 mouse_genomes_project 17 20115604 20129947 + MGP_LPJ_P0045577 Zfp677 protein_coding protein_coding MGP_LPJ_T0047215.1 MGP_LPJ_G0023541.1 mouse_genomes_project 17 35701641 35704942 + MGP_LPJ_P0047215 Gm16181 protein_coding protein_coding MGP_LPJ_T0013247.1 MGP_LPJ_G0011338.1 mouse_genomes_project 17 56005876 56006260 + processed_pseudogene processed_pseudogene MGP_LPJ_T0017501.1 MGP_LPJ_G0015260.1 mouse_genomes_project 17 29352788 29484231 + Gm28052 processed_transcript processed_transcript MGP_LPJ_T0048518.1 MGP_LPJ_G0023986.1 mouse_genomes_project 17 87561082 87653054 + MGP_LPJ_P0048518 protein_coding protein_coding MGP_LPJ_T0048519.1 MGP_LPJ_G0023986.1 mouse_genomes_project 17 87561082 87665593 + MGP_LPJ_P0048519 protein_coding protein_coding MGP_LPJ_T0048520.1 MGP_LPJ_G0023986.1 mouse_genomes_project 17 87561082 87653056 + MGP_LPJ_P0048520 protein_coding protein_coding MGP_LPJ_T0048521.1 MGP_LPJ_G0023986.1 mouse_genomes_project 17 87561103 87681731 + MGP_LPJ_P0048521 protein_coding nonsense_mediated_decay MGP_LPJ_T0048522.1 MGP_LPJ_G0023986.1 mouse_genomes_project 17 87561110 87675122 + MGP_LPJ_P0048522 protein_coding protein_coding MGP_LPJ_T0048523.1 MGP_LPJ_G0023986.1 mouse_genomes_project 17 87568552 87683837 + MGP_LPJ_P0048523 protein_coding unknown_likely_coding MGP_LPJ_T0048524.1 MGP_LPJ_G0023986.1 mouse_genomes_project 17 87585502 87611898 + protein_coding processed_transcript MGP_LPJ_T0048525.1 MGP_LPJ_G0023986.1 mouse_genomes_project 17 87613663 87660414 + MGP_LPJ_P0048525 protein_coding protein_coding MGP_LPJ_T0048526.1 MGP_LPJ_G0023986.1 mouse_genomes_project 17 87644521 87680431 + MGP_LPJ_P0048526 protein_coding protein_coding MGP_LPJ_T0048527.1 MGP_LPJ_G0023986.1 mouse_genomes_project 17 87655603 87664767 + protein_coding processed_transcript MGP_LPJ_T0046539.1 MGP_LPJ_G0023390.1 mouse_genomes_project 17 31120422 31124085 - MGP_LPJ_P0046539 Tff1 protein_coding protein_coding MGP_LPJ_T0046159.1 MGP_LPJ_G0023300.1 mouse_genomes_project 17 25622054 25626972 - MGP_LPJ_P0046159 Arhgdig protein_coding nonsense_mediated_decay MGP_LPJ_T0046161.1 MGP_LPJ_G0023300.1 mouse_genomes_project 17 25625011 25627179 - MGP_LPJ_P0046161 Arhgdig protein_coding protein_coding MGP_LPJ_T0046162.1 MGP_LPJ_G0023300.1 mouse_genomes_project 17 25625225 25627198 - MGP_LPJ_P0046162 Arhgdig protein_coding protein_coding MGP_LPJ_T0046163.1 MGP_LPJ_G0023300.1 mouse_genomes_project 17 25625264 25633597 - Arhgdig protein_coding processed_transcript MGP_LPJ_T0046164.1 MGP_LPJ_G0023300.1 mouse_genomes_project 17 25625319 25626973 - Arhgdig protein_coding retained_intron MGP_LPJ_T0047512.1 MGP_LPJ_G0023624.1 mouse_genomes_project 17 38547797 38548783 - Olfr112 protein_coding processed_transcript MGP_LPJ_T0047513.1 MGP_LPJ_G0023624.1 mouse_genomes_project 17 38547808 38550415 - MGP_LPJ_P0047513 Olfr112 protein_coding protein_coding MGP_LPJ_T0048608.1 MGP_LPJ_G0024018.1 mouse_genomes_project 17 92154871 92155288 + MGP_LPJ_P0048608 Rpl36-ps4 protein_coding protein_coding MGP_LPJ_T0045248.1 MGP_LPJ_G0023010.1 mouse_genomes_project 17 3124601 3221321 + MGP_LPJ_P0045248 Snx9 protein_coding protein_coding MGP_LPJ_T0047604.1 MGP_LPJ_G0023689.1 mouse_genomes_project 17 45379172 45626820 + MGP_LPJ_P0047604 Rcan2 protein_coding protein_coding MGP_LPJ_T0047605.1 MGP_LPJ_G0023689.1 mouse_genomes_project 17 45532403 45625131 + MGP_LPJ_P0047605 Rcan2 protein_coding protein_coding MGP_LPJ_T0047606.1 MGP_LPJ_G0023689.1 mouse_genomes_project 17 45534140 45626818 + MGP_LPJ_P0047606 Rcan2 protein_coding protein_coding MGP_LPJ_T0003755.1 MGP_LPJ_G0003383.1 mouse_genomes_project 17 32872706 32873904 + Gm17115 antisense antisense MGP_LPJ_T0045687.1 MGP_LPJ_G0023182.1 mouse_genomes_project 17 23031167 23038542 - MGP_LPJ_P0045687 Prss41 protein_coding protein_coding MGP_LPJ_T0045688.1 MGP_LPJ_G0023182.1 mouse_genomes_project 17 23031167 23038525 - MGP_LPJ_P0045688 Prss41 protein_coding protein_coding MGP_LPJ_T0045689.1 MGP_LPJ_G0023182.1 mouse_genomes_project 17 23035484 23038542 - MGP_LPJ_P0045689 Prss41 protein_coding protein_coding MGP_LPJ_T0045690.1 MGP_LPJ_G0023182.1 mouse_genomes_project 17 23036613 23038519 - Prss41 protein_coding retained_intron MGP_LPJ_T0045694.1 MGP_LPJ_G0023184.1 mouse_genomes_project 17 23063074 23068103 + MGP_LPJ_P0045694 Prss21 protein_coding protein_coding MGP_LPJ_T0045659.1 MGP_LPJ_G0023173.1 mouse_genomes_project 17 22871569 22891024 - protein_coding retained_intron MGP_LPJ_T0045660.1 MGP_LPJ_G0023173.1 mouse_genomes_project 17 22871569 22888958 - MGP_LPJ_P0045660 protein_coding protein_coding MGP_LPJ_T0045661.1 MGP_LPJ_G0023173.1 mouse_genomes_project 17 22871569 22891024 - MGP_LPJ_P0045661 protein_coding protein_coding MGP_LPJ_T0045662.1 MGP_LPJ_G0023173.1 mouse_genomes_project 17 22872134 22890181 - protein_coding retained_intron MGP_LPJ_T0045663.1 MGP_LPJ_G0023173.1 mouse_genomes_project 17 22872134 22873416 - protein_coding retained_intron MGP_LPJ_T0048583.1 MGP_LPJ_G0024012.1 mouse_genomes_project 17 91444728 91552134 + MGP_LPJ_P0048583 Ttc7 protein_coding protein_coding MGP_LPJ_T0048584.1 MGP_LPJ_G0024012.1 mouse_genomes_project 17 91444735 91454776 + Ttc7 protein_coding processed_transcript MGP_LPJ_T0048585.1 MGP_LPJ_G0024012.1 mouse_genomes_project 17 91444747 91537061 + MGP_LPJ_P0048585 Ttc7 protein_coding protein_coding MGP_LPJ_T0048586.1 MGP_LPJ_G0024012.1 mouse_genomes_project 17 91444793 91527116 + MGP_LPJ_P0048586 Ttc7 protein_coding nonsense_mediated_decay MGP_LPJ_T0048587.1 MGP_LPJ_G0024012.1 mouse_genomes_project 17 91454657 91550453 + MGP_LPJ_P0048587 Ttc7 protein_coding nonsense_mediated_decay MGP_LPJ_T0048588.1 MGP_LPJ_G0024012.1 mouse_genomes_project 17 91471537 91493714 + Ttc7 protein_coding processed_transcript MGP_LPJ_T0048589.1 MGP_LPJ_G0024012.1 mouse_genomes_project 17 91485236 91497916 + Ttc7 protein_coding retained_intron MGP_LPJ_T0048590.1 MGP_LPJ_G0024012.1 mouse_genomes_project 17 91493846 91503543 + Ttc7 protein_coding processed_transcript MGP_LPJ_T0048591.1 MGP_LPJ_G0024012.1 mouse_genomes_project 17 91549219 91552134 + Ttc7 protein_coding processed_transcript MGP_LPJ_T0048003.1 MGP_LPJ_G0023794.1 mouse_genomes_project 17 53933480 54032593 - MGP_LPJ_P0048003 Satb1 protein_coding protein_coding MGP_LPJ_T0048004.1 MGP_LPJ_G0023794.1 mouse_genomes_project 17 53933481 54026525 - MGP_LPJ_P0048004 Satb1 protein_coding protein_coding MGP_LPJ_T0048005.1 MGP_LPJ_G0023794.1 mouse_genomes_project 17 53936187 54034305 - MGP_LPJ_P0048005 Satb1 protein_coding protein_coding MGP_LPJ_T0048006.1 MGP_LPJ_G0023794.1 mouse_genomes_project 17 53936745 54010987 - MGP_LPJ_P0048006 Satb1 protein_coding protein_coding MGP_LPJ_T0048007.1 MGP_LPJ_G0023794.1 mouse_genomes_project 17 53936748 54026503 - MGP_LPJ_P0048007 Satb1 protein_coding protein_coding MGP_LPJ_T0048008.1 MGP_LPJ_G0023794.1 mouse_genomes_project 17 53936764 54015029 - MGP_LPJ_P0048008 Satb1 protein_coding protein_coding MGP_LPJ_T0048009.1 MGP_LPJ_G0023794.1 mouse_genomes_project 17 53936769 54012748 - MGP_LPJ_P0048009 Satb1 protein_coding protein_coding MGP_LPJ_T0048010.1 MGP_LPJ_G0023794.1 mouse_genomes_project 17 53937281 53939560 - Satb1 protein_coding retained_intron MGP_LPJ_T0048011.1 MGP_LPJ_G0023794.1 mouse_genomes_project 17 54002397 54009200 - Satb1 protein_coding processed_transcript MGP_LPJ_T0048012.1 MGP_LPJ_G0023794.1 mouse_genomes_project 17 54004433 54021022 - MGP_LPJ_P0048012 Satb1 protein_coding protein_coding MGP_LPJ_T0048013.1 MGP_LPJ_G0023794.1 mouse_genomes_project 17 54005430 54031940 - MGP_LPJ_P0048013 Satb1 protein_coding protein_coding MGP_LPJ_T0048014.1 MGP_LPJ_G0023794.1 mouse_genomes_project 17 54007147 54010987 - Satb1 protein_coding retained_intron MGP_LPJ_T0048015.1 MGP_LPJ_G0023794.1 mouse_genomes_project 17 54009256 54026525 - MGP_LPJ_P0048015 Satb1 protein_coding protein_coding MGP_LPJ_T0048016.1 MGP_LPJ_G0023794.1 mouse_genomes_project 17 54024578 54029434 - Satb1 protein_coding retained_intron MGP_LPJ_T0048389.1 MGP_LPJ_G0023934.1 mouse_genomes_project 17 77595615 77598554 + MGP_LPJ_P0048389 protein_coding protein_coding MGP_LPJ_T0048390.1 MGP_LPJ_G0023934.1 mouse_genomes_project 17 77595740 77598554 + MGP_LPJ_P0048390 protein_coding protein_coding MGP_LPJ_T0048391.1 MGP_LPJ_G0023934.1 mouse_genomes_project 17 77595740 77598549 + MGP_LPJ_P0048391 protein_coding protein_coding MGP_LPJ_T0045288.1 MGP_LPJ_G0023022.1 mouse_genomes_project 17 4232700 4277077 - MGP_LPJ_P0045288 protein_coding protein_coding MGP_LPJ_T0045283.1 MGP_LPJ_G0023018.1 mouse_genomes_project 17 3624873 3638338 - MGP_LPJ_P0045283 Dynlt1b protein_coding protein_coding MGP_LPJ_T0045380.1 MGP_LPJ_G0023054.1 mouse_genomes_project 17 9884199 9976434 - MGP_LPJ_P0045380 Slc22a3 protein_coding protein_coding MGP_LPJ_T0048432.1 MGP_LPJ_G0023944.1 mouse_genomes_project 17 79014656 79029376 - MGP_LPJ_P0048432 Fam98a protein_coding protein_coding MGP_LPJ_T0048433.1 MGP_LPJ_G0023944.1 mouse_genomes_project 17 79016601 79018147 - Fam98a protein_coding retained_intron MGP_LPJ_T0048434.1 MGP_LPJ_G0023944.1 mouse_genomes_project 17 79022037 79029226 - Fam98a protein_coding retained_intron MGP_LPJ_T0010238.1 MGP_LPJ_G0008356.1 mouse_genomes_project 17 68360915 68361040 + Gm25731 miRNA miRNA MGP_LPJ_T0006968.1 MGP_LPJ_G0005740.1 mouse_genomes_project 17 47997737 48004282 + Gm26785 lincRNA lincRNA MGP_LPJ_T0047743.1 MGP_LPJ_G0023718.1 mouse_genomes_project 17 47978303 47981466 + MGP_LPJ_P0047743 Lrrc73 protein_coding protein_coding MGP_LPJ_T0047133.1 MGP_LPJ_G0023520.1 mouse_genomes_project 17 35524622 35527582 + MGP_LPJ_P0047133 Ddah2 protein_coding protein_coding MGP_LPJ_T0047134.1 MGP_LPJ_G0023520.1 mouse_genomes_project 17 35525302 35526393 + MGP_LPJ_P0047134 Ddah2 protein_coding protein_coding MGP_LPJ_T0047135.1 MGP_LPJ_G0023520.1 mouse_genomes_project 17 35526379 35527112 + Ddah2 protein_coding retained_intron MGP_LPJ_T0046648.1 MGP_LPJ_G0023412.1 mouse_genomes_project 17 32466536 32475831 - MGP_LPJ_P0046648 Pglyrp2 protein_coding protein_coding MGP_LPJ_T0046649.1 MGP_LPJ_G0023412.1 mouse_genomes_project 17 32466797 32478519 - MGP_LPJ_P0046649 Pglyrp2 protein_coding protein_coding MGP_LPJ_T0045299.1 MGP_LPJ_G0023027.1 mouse_genomes_project 17 4928857 4960366 + MGP_LPJ_P0045299 protein_coding protein_coding MGP_LPJ_T0017502.1 MGP_LPJ_G0015261.1 mouse_genomes_project 17 29712705 29719677 + Gm16758 processed_transcript processed_transcript MGP_LPJ_T0101918.1 MGP_LPJ_G0039955.1 mouse_genomes_project 17 16053919 16513276 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0048105.1 MGP_LPJ_G0023837.1 mouse_genomes_project 17 58949694 58953247 - MGP_LPJ_P0048105 protein_coding protein_coding MGP_LPJ_T0048106.1 MGP_LPJ_G0023837.1 mouse_genomes_project 17 58949702 58953298 - MGP_LPJ_P0048106 protein_coding protein_coding MGP_LPJ_T0048107.1 MGP_LPJ_G0023837.1 mouse_genomes_project 17 58951669 58955746 - MGP_LPJ_P0048107 protein_coding protein_coding MGP_LPJ_T0048108.1 MGP_LPJ_G0023837.1 mouse_genomes_project 17 58951669 58974439 - MGP_LPJ_P0048108 protein_coding protein_coding MGP_LPJ_T0048109.1 MGP_LPJ_G0023837.1 mouse_genomes_project 17 58951669 58974366 - MGP_LPJ_P0048109 protein_coding nonsense_mediated_decay MGP_LPJ_T0048110.1 MGP_LPJ_G0023837.1 mouse_genomes_project 17 58951679 58961227 - protein_coding processed_transcript MGP_LPJ_T0048111.1 MGP_LPJ_G0023837.1 mouse_genomes_project 17 58952035 58955749 - MGP_LPJ_P0048111 protein_coding protein_coding MGP_LPJ_T0048112.1 MGP_LPJ_G0023837.1 mouse_genomes_project 17 58954727 58960168 - MGP_LPJ_P0048112 protein_coding protein_coding MGP_LPJ_T0048113.1 MGP_LPJ_G0023837.1 mouse_genomes_project 17 58956263 58958166 - protein_coding retained_intron MGP_LPJ_T0048114.1 MGP_LPJ_G0023837.1 mouse_genomes_project 17 58957626 58963826 - protein_coding retained_intron MGP_LPJ_T0048115.1 MGP_LPJ_G0023837.1 mouse_genomes_project 17 58958810 58964248 - protein_coding retained_intron MGP_LPJ_T0048116.1 MGP_LPJ_G0023837.1 mouse_genomes_project 17 58959755 58960407 - protein_coding retained_intron MGP_LPJ_T0048117.1 MGP_LPJ_G0023837.1 mouse_genomes_project 17 58959997 58974416 - MGP_LPJ_P0048117 protein_coding nonsense_mediated_decay MGP_LPJ_T0048118.1 MGP_LPJ_G0023837.1 mouse_genomes_project 17 58966175 58972878 - protein_coding retained_intron MGP_LPJ_T0048119.1 MGP_LPJ_G0023837.1 mouse_genomes_project 17 58966304 58974155 - protein_coding retained_intron MGP_LPJ_T0048120.1 MGP_LPJ_G0023837.1 mouse_genomes_project 17 58968709 58974365 - protein_coding retained_intron MGP_LPJ_T0048211.1 MGP_LPJ_G0023882.1 mouse_genomes_project 17 67102936 67156167 - MGP_LPJ_P0048211 Pja2 protein_coding protein_coding MGP_LPJ_T0048212.1 MGP_LPJ_G0023882.1 mouse_genomes_project 17 67102937 67136784 - MGP_LPJ_P0048212 Pja2 protein_coding protein_coding MGP_LPJ_T0048213.1 MGP_LPJ_G0023882.1 mouse_genomes_project 17 67102937 67136784 - MGP_LPJ_P0048213 Pja2 protein_coding protein_coding MGP_LPJ_T0048214.1 MGP_LPJ_G0023882.1 mouse_genomes_project 17 67102951 67156116 - MGP_LPJ_P0048214 Pja2 protein_coding protein_coding MGP_LPJ_T0013249.1 MGP_LPJ_G0011340.1 mouse_genomes_project 17 56043645 56044365 + processed_pseudogene processed_pseudogene MGP_LPJ_T0045945.1 MGP_LPJ_G0023249.1 mouse_genomes_project 17 24525004 24577718 + MGP_LPJ_P0045945 protein_coding protein_coding MGP_LPJ_T0045946.1 MGP_LPJ_G0023249.1 mouse_genomes_project 17 24525527 24577718 + MGP_LPJ_P0045946 protein_coding protein_coding MGP_LPJ_T0045947.1 MGP_LPJ_G0023249.1 mouse_genomes_project 17 24526088 24549493 + MGP_LPJ_P0045947 protein_coding nonsense_mediated_decay MGP_LPJ_T0045948.1 MGP_LPJ_G0023249.1 mouse_genomes_project 17 24554262 24556955 + protein_coding retained_intron MGP_LPJ_T0045949.1 MGP_LPJ_G0023249.1 mouse_genomes_project 17 24565889 24572745 + MGP_LPJ_P0045949 protein_coding protein_coding MGP_LPJ_T0045950.1 MGP_LPJ_G0023249.1 mouse_genomes_project 17 24565932 24577717 + MGP_LPJ_P0045950 protein_coding protein_coding MGP_LPJ_T0045952.1 MGP_LPJ_G0023249.1 mouse_genomes_project 17 24566129 24575142 + MGP_LPJ_P0045952 protein_coding protein_coding MGP_LPJ_T0011439.1 MGP_LPJ_G0009557.1 mouse_genomes_project 17 32051970 32052241 + Gm25883 misc_RNA misc_RNA MGP_LPJ_T0046875.1 MGP_LPJ_G0023467.1 mouse_genomes_project 17 34365302 34375811 - MGP_LPJ_P0046875 Brd2 protein_coding protein_coding MGP_LPJ_T0046876.1 MGP_LPJ_G0023467.1 mouse_genomes_project 17 34365309 34373685 - MGP_LPJ_P0046876 Brd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0046877.1 MGP_LPJ_G0023467.1 mouse_genomes_project 17 34365963 34367012 - Brd2 protein_coding retained_intron MGP_LPJ_T0046878.1 MGP_LPJ_G0023467.1 mouse_genomes_project 17 34367038 34368231 - Brd2 protein_coding retained_intron MGP_LPJ_T0046879.1 MGP_LPJ_G0023467.1 mouse_genomes_project 17 34367040 34368257 - MGP_LPJ_P0046879 Brd2 protein_coding protein_coding MGP_LPJ_T0046880.1 MGP_LPJ_G0023467.1 mouse_genomes_project 17 34367075 34368356 - MGP_LPJ_P0046880 Brd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0046881.1 MGP_LPJ_G0023467.1 mouse_genomes_project 17 34367364 34375266 - MGP_LPJ_P0046881 Brd2 protein_coding protein_coding MGP_LPJ_T0046882.1 MGP_LPJ_G0023467.1 mouse_genomes_project 17 34368043 34368750 - Brd2 protein_coding retained_intron MGP_LPJ_T0046883.1 MGP_LPJ_G0023467.1 mouse_genomes_project 17 34372801 34375228 - Brd2 protein_coding processed_transcript MGP_LPJ_T0046884.1 MGP_LPJ_G0023467.1 mouse_genomes_project 17 34372831 34375897 - Brd2 protein_coding processed_transcript MGP_LPJ_T0046885.1 MGP_LPJ_G0023467.1 mouse_genomes_project 17 34373140 34375912 - Brd2 protein_coding processed_transcript MGP_LPJ_T0003796.1 MGP_LPJ_G0003414.1 mouse_genomes_project 17 72355358 72357205 - 2410021H03Rik antisense antisense MGP_LPJ_T0006936.1 MGP_LPJ_G0005715.1 mouse_genomes_project 17 28770533 28771643 + Gm16195 lincRNA lincRNA MGP_LPJ_T0047550.1 MGP_LPJ_G0023655.1 mouse_genomes_project 17 40157274 40157986 - MGP_LPJ_P0047550 Gm21903 protein_coding protein_coding MGP_LPJ_T0101994.1 MGP_LPJ_G0040031.1 mouse_genomes_project 17 58183395 58184043 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0048319.1 MGP_LPJ_G0023911.1 mouse_genomes_project 17 74153887 74172090 - MGP_LPJ_P0048319 Myl12b protein_coding protein_coding MGP_LPJ_T0048320.1 MGP_LPJ_G0023911.1 mouse_genomes_project 17 74154239 74155935 - Myl12b protein_coding retained_intron MGP_LPJ_T0048321.1 MGP_LPJ_G0023911.1 mouse_genomes_project 17 74156900 74171833 - Myl12b protein_coding retained_intron MGP_LPJ_T0048266.1 MGP_LPJ_G0023897.1 mouse_genomes_project 17 69423677 69449890 - MGP_LPJ_P0048266 Rab12 protein_coding protein_coding MGP_LPJ_T0048267.1 MGP_LPJ_G0023897.1 mouse_genomes_project 17 69426656 69429486 - Rab12 protein_coding retained_intron MGP_LPJ_T0048268.1 MGP_LPJ_G0023897.1 mouse_genomes_project 17 69429515 69449553 - Rab12 protein_coding processed_transcript MGP_LPJ_T0048269.1 MGP_LPJ_G0023897.1 mouse_genomes_project 17 69435960 69449886 - Rab12 protein_coding retained_intron MGP_LPJ_T0101975.1 MGP_LPJ_G0040012.1 mouse_genomes_project 17 37612643 37612691 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0045820.1 MGP_LPJ_G0023217.1 mouse_genomes_project 17 23950187 23961090 - MGP_LPJ_P0045820 Slc9a3r2 protein_coding protein_coding MGP_LPJ_T0045821.1 MGP_LPJ_G0023217.1 mouse_genomes_project 17 23950187 23955773 - MGP_LPJ_P0045821 Slc9a3r2 protein_coding protein_coding MGP_LPJ_T0047980.1 MGP_LPJ_G0023787.1 mouse_genomes_project 17 51524884 51535306 + MGP_LPJ_P0047980 Mocs1 protein_coding protein_coding MGP_LPJ_T0047981.1 MGP_LPJ_G0023787.1 mouse_genomes_project 17 51524886 51546441 + MGP_LPJ_P0047981 Mocs1 protein_coding protein_coding MGP_LPJ_T0047982.1 MGP_LPJ_G0023787.1 mouse_genomes_project 17 51524932 51546444 + MGP_LPJ_P0047982 Mocs1 protein_coding protein_coding MGP_LPJ_T0047983.1 MGP_LPJ_G0023787.1 mouse_genomes_project 17 51524964 51544555 + MGP_LPJ_P0047983 Mocs1 protein_coding nonsense_mediated_decay MGP_LPJ_T0047984.1 MGP_LPJ_G0023787.1 mouse_genomes_project 17 51524964 51544555 + MGP_LPJ_P0047984 Mocs1 protein_coding nonsense_mediated_decay MGP_LPJ_T0047985.1 MGP_LPJ_G0023787.1 mouse_genomes_project 17 51529719 51532044 + Mocs1 protein_coding processed_transcript MGP_LPJ_T0047986.1 MGP_LPJ_G0023787.1 mouse_genomes_project 17 51539709 51544033 + MGP_LPJ_P0047986 Mocs1 protein_coding protein_coding MGP_LPJ_T0047987.1 MGP_LPJ_G0023787.1 mouse_genomes_project 17 51542161 51546444 + MGP_LPJ_P0047987 Mocs1 protein_coding protein_coding MGP_LPJ_T0045289.1 MGP_LPJ_G0023023.1 mouse_genomes_project 17 4289264 4292068 - MGP_LPJ_P0045289 protein_coding protein_coding MGP_LPJ_T0045817.1 MGP_LPJ_G0023215.1 mouse_genomes_project 17 23905362 23943551 - MGP_LPJ_P0045817 Tsc2 protein_coding protein_coding MGP_LPJ_T0045818.1 MGP_LPJ_G0023215.1 mouse_genomes_project 17 23905934 23943511 - MGP_LPJ_P0045818 Tsc2 protein_coding unknown_likely_coding MGP_LPJ_T0046663.1 MGP_LPJ_G0023421.1 mouse_genomes_project 17 32902174 32920499 - MGP_LPJ_P0046663 Zfp799 protein_coding protein_coding MGP_LPJ_T0046664.1 MGP_LPJ_G0023421.1 mouse_genomes_project 17 32902180 32911131 - MGP_LPJ_P0046664 Zfp799 protein_coding protein_coding MGP_LPJ_T0046665.1 MGP_LPJ_G0023421.1 mouse_genomes_project 17 32909754 32920466 - MGP_LPJ_P0046665 Zfp799 protein_coding protein_coding MGP_LPJ_T0046666.1 MGP_LPJ_G0023421.1 mouse_genomes_project 17 32910008 32920484 - MGP_LPJ_P0046666 Zfp799 protein_coding protein_coding MGP_LPJ_T0046667.1 MGP_LPJ_G0023421.1 mouse_genomes_project 17 32910372 32920453 - MGP_LPJ_P0046667 Zfp799 protein_coding protein_coding MGP_LPJ_T0045644.1 MGP_LPJ_G0023168.1 mouse_genomes_project 17 22842197 22843228 - Thoc6 protein_coding retained_intron MGP_LPJ_T0045645.1 MGP_LPJ_G0023168.1 mouse_genomes_project 17 22842201 22847295 - Thoc6 protein_coding retained_intron MGP_LPJ_T0045646.1 MGP_LPJ_G0023168.1 mouse_genomes_project 17 22842201 22847335 - MGP_LPJ_P0045646 Thoc6 protein_coding protein_coding MGP_LPJ_T0045647.1 MGP_LPJ_G0023168.1 mouse_genomes_project 17 22842201 22847295 - MGP_LPJ_P0045647 Thoc6 protein_coding protein_coding MGP_LPJ_T0045648.1 MGP_LPJ_G0023168.1 mouse_genomes_project 17 22842380 22847058 - MGP_LPJ_P0045648 Thoc6 protein_coding protein_coding MGP_LPJ_T0045649.1 MGP_LPJ_G0023168.1 mouse_genomes_project 17 22842380 22847282 - MGP_LPJ_P0045649 Thoc6 protein_coding protein_coding MGP_LPJ_T0045650.1 MGP_LPJ_G0023168.1 mouse_genomes_project 17 22842784 22844093 - MGP_LPJ_P0045650 Thoc6 protein_coding protein_coding MGP_LPJ_T0045651.1 MGP_LPJ_G0023168.1 mouse_genomes_project 17 22843905 22847324 - MGP_LPJ_P0045651 Thoc6 protein_coding protein_coding MGP_LPJ_T0047253.1 MGP_LPJ_G0023551.1 mouse_genomes_project 17 36089570 36091017 + MGP_LPJ_P0047253 Psors1c2 protein_coding protein_coding MGP_LPJ_T0001018.1 MGP_LPJ_G0000943.1 mouse_genomes_project 17 53955312 53959505 - TEC TEC MGP_LPJ_T0101930.1 MGP_LPJ_G0039967.1 mouse_genomes_project 17 19040687 19041438 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0006964.1 MGP_LPJ_G0005737.1 mouse_genomes_project 17 38802314 38805299 + Gm20524 lincRNA lincRNA MGP_LPJ_T0047551.1 MGP_LPJ_G0023656.1 mouse_genomes_project 17 40191767 40195115 - MGP_LPJ_P0047551 Esp23 protein_coding protein_coding MGP_LPJ_T0045643.1 MGP_LPJ_G0023167.1 mouse_genomes_project 17 22834294 22842194 + MGP_LPJ_P0045643 Ccdc64b protein_coding protein_coding MGP_LPJ_T0046297.1 MGP_LPJ_G0023333.1 mouse_genomes_project 17 27306196 27322530 - MGP_LPJ_P0046297 Spdef protein_coding protein_coding MGP_LPJ_T0046298.1 MGP_LPJ_G0023333.1 mouse_genomes_project 17 27306291 27322531 - MGP_LPJ_P0046298 Spdef protein_coding protein_coding MGP_LPJ_T0046299.1 MGP_LPJ_G0023333.1 mouse_genomes_project 17 27306293 27322469 - MGP_LPJ_P0046299 Spdef protein_coding protein_coding MGP_LPJ_T0046300.1 MGP_LPJ_G0023333.1 mouse_genomes_project 17 27306349 27309416 - Spdef protein_coding processed_transcript MGP_LPJ_T0046301.1 MGP_LPJ_G0023333.1 mouse_genomes_project 17 27313591 27322504 - MGP_LPJ_P0046301 Spdef protein_coding protein_coding MGP_LPJ_T0046423.1 MGP_LPJ_G0023359.1 mouse_genomes_project 17 28626315 28645279 - MGP_LPJ_P0046423 4930539E08Rik protein_coding protein_coding MGP_LPJ_T0046424.1 MGP_LPJ_G0023359.1 mouse_genomes_project 17 28628806 28645188 - MGP_LPJ_P0046424 4930539E08Rik protein_coding unknown_likely_coding MGP_LPJ_T0101992.1 MGP_LPJ_G0040029.1 mouse_genomes_project 17 56078645 56079265 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0100477.1 MGP_LPJ_G0038740.1 mouse_genomes_project 17 56960998 56961135 + Gm26291 snoRNA snoRNA MGP_LPJ_T0047131.1 MGP_LPJ_G0023519.1 mouse_genomes_project 17 35512746 35524236 + MGP_LPJ_P0047131 Clic1 protein_coding protein_coding MGP_LPJ_T0047132.1 MGP_LPJ_G0023519.1 mouse_genomes_project 17 35515196 35521311 + Clic1 protein_coding retained_intron MGP_LPJ_T0101941.1 MGP_LPJ_G0039978.1 mouse_genomes_project 17 22355618 22382865 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0047929.1 MGP_LPJ_G0023770.1 mouse_genomes_project 17 49956580 49958129 - MGP_LPJ_P0047929 1700122O11Rik protein_coding protein_coding MGP_LPJ_T0046598.1 MGP_LPJ_G0023403.1 mouse_genomes_project 17 31965446 32058525 - MGP_LPJ_P0046598 Hsf2bp protein_coding protein_coding MGP_LPJ_T0046599.1 MGP_LPJ_G0023403.1 mouse_genomes_project 17 32031741 32047238 - Hsf2bp protein_coding processed_transcript MGP_LPJ_T0045313.1 MGP_LPJ_G0023035.1 mouse_genomes_project 17 5405405 5428671 - MGP_LPJ_P0045313 protein_coding protein_coding MGP_LPJ_T0046381.1 MGP_LPJ_G0023348.1 mouse_genomes_project 17 28061083 28153289 - MGP_LPJ_P0046381 Fkbp5 protein_coding protein_coding MGP_LPJ_T0046382.1 MGP_LPJ_G0023348.1 mouse_genomes_project 17 28061085 28190187 - MGP_LPJ_P0046382 Fkbp5 protein_coding protein_coding MGP_LPJ_T0046383.1 MGP_LPJ_G0023348.1 mouse_genomes_project 17 28061093 28155138 - MGP_LPJ_P0046383 Fkbp5 protein_coding protein_coding MGP_LPJ_T0046384.1 MGP_LPJ_G0023348.1 mouse_genomes_project 17 28064419 28092682 - Fkbp5 protein_coding processed_transcript MGP_LPJ_T0046385.1 MGP_LPJ_G0023348.1 mouse_genomes_project 17 28080010 28106340 - MGP_LPJ_P0046385 Fkbp5 protein_coding protein_coding MGP_LPJ_T0046386.1 MGP_LPJ_G0023348.1 mouse_genomes_project 17 28164318 28174430 - Fkbp5 protein_coding retained_intron MGP_LPJ_T0101927.1 MGP_LPJ_G0039964.1 mouse_genomes_project 17 18463855 18464754 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0048202.1 MGP_LPJ_G0023878.1 mouse_genomes_project 17 65372993 65666480 - MGP_LPJ_P0048202 Efna5 protein_coding protein_coding MGP_LPJ_T0048203.1 MGP_LPJ_G0023878.1 mouse_genomes_project 17 65376115 65666307 - MGP_LPJ_P0048203 Efna5 protein_coding protein_coding MGP_LPJ_T0013256.1 MGP_LPJ_G0011347.1 mouse_genomes_project 17 66135227 66135718 - processed_pseudogene processed_pseudogene MGP_LPJ_T0046955.1 MGP_LPJ_G0023487.1 mouse_genomes_project 17 34939429 34941378 + MGP_LPJ_P0046955 Gpsm3 protein_coding protein_coding MGP_LPJ_T0046956.1 MGP_LPJ_G0023487.1 mouse_genomes_project 17 34939715 34941378 + MGP_LPJ_P0046956 Gpsm3 protein_coding nonsense_mediated_decay MGP_LPJ_T0046957.1 MGP_LPJ_G0023487.1 mouse_genomes_project 17 34939854 34941264 + MGP_LPJ_P0046957 Gpsm3 protein_coding protein_coding MGP_LPJ_T0003736.1 MGP_LPJ_G0003369.1 mouse_genomes_project 17 23830931 23831432 + Rab26os antisense antisense MGP_LPJ_T0003737.1 MGP_LPJ_G0003369.1 mouse_genomes_project 17 23830950 23831431 + Rab26os antisense antisense MGP_LPJ_T0045554.1 MGP_LPJ_G0023123.1 mouse_genomes_project 17 19211478 19212599 + MGP_LPJ_P0045554 Gm5145 protein_coding protein_coding MGP_LPJ_T0007002.1 MGP_LPJ_G0005763.1 mouse_genomes_project 17 91436848 91443536 - 4833418N02Rik lincRNA lincRNA MGP_LPJ_T0007003.1 MGP_LPJ_G0005763.1 mouse_genomes_project 17 91436883 91444657 - 4833418N02Rik lincRNA lincRNA MGP_LPJ_T0007004.1 MGP_LPJ_G0005763.1 mouse_genomes_project 17 91437209 91444343 - 4833418N02Rik lincRNA lincRNA MGP_LPJ_T0007005.1 MGP_LPJ_G0005763.1 mouse_genomes_project 17 91442085 91444622 - 4833418N02Rik lincRNA lincRNA MGP_LPJ_T0098199.1 MGP_LPJ_G0036480.1 mouse_genomes_project 17 49728564 49728683 + n-R5s28 rRNA rRNA MGP_LPJ_T0045386.1 MGP_LPJ_G0023058.1 mouse_genomes_project 17 10337791 10366108 - MGP_LPJ_P0045386 Mas1 protein_coding protein_coding MGP_LPJ_T0045387.1 MGP_LPJ_G0023058.1 mouse_genomes_project 17 10337827 10352453 - MGP_LPJ_P0045387 Mas1 protein_coding protein_coding MGP_LPJ_T0045388.1 MGP_LPJ_G0023058.1 mouse_genomes_project 17 10337827 10352333 - MGP_LPJ_P0045388 Mas1 protein_coding protein_coding MGP_LPJ_T0045389.1 MGP_LPJ_G0023058.1 mouse_genomes_project 17 10337827 10352453 - MGP_LPJ_P0045389 Mas1 protein_coding protein_coding MGP_LPJ_T0045390.1 MGP_LPJ_G0023058.1 mouse_genomes_project 17 10337827 10344824 - MGP_LPJ_P0045390 Mas1 protein_coding protein_coding MGP_LPJ_T0045391.1 MGP_LPJ_G0023058.1 mouse_genomes_project 17 10338916 10349900 - MGP_LPJ_P0045391 Mas1 protein_coding protein_coding MGP_LPJ_T0045392.1 MGP_LPJ_G0023058.1 mouse_genomes_project 17 10339019 10349886 - MGP_LPJ_P0045392 Mas1 protein_coding protein_coding MGP_LPJ_T0045393.1 MGP_LPJ_G0023058.1 mouse_genomes_project 17 10339030 10349900 - MGP_LPJ_P0045393 Mas1 protein_coding protein_coding MGP_LPJ_T0045394.1 MGP_LPJ_G0023058.1 mouse_genomes_project 17 10339173 10353024 - MGP_LPJ_P0045394 Mas1 protein_coding protein_coding MGP_LPJ_T0013232.1 MGP_LPJ_G0011323.1 mouse_genomes_project 17 38869702 38870360 - processed_pseudogene processed_pseudogene MGP_LPJ_T0046962.1 MGP_LPJ_G0023489.1 mouse_genomes_project 17 34947629 34950700 + MGP_LPJ_P0046962 Ager protein_coding protein_coding MGP_LPJ_T0046963.1 MGP_LPJ_G0023489.1 mouse_genomes_project 17 34947629 34950704 + MGP_LPJ_P0046963 Ager protein_coding protein_coding MGP_LPJ_T0046964.1 MGP_LPJ_G0023489.1 mouse_genomes_project 17 34947642 34950675 + Ager protein_coding processed_transcript MGP_LPJ_T0046965.1 MGP_LPJ_G0023489.1 mouse_genomes_project 17 34947642 34950675 + Ager protein_coding retained_intron MGP_LPJ_T0046966.1 MGP_LPJ_G0023489.1 mouse_genomes_project 17 34947661 34950628 + Ager protein_coding retained_intron MGP_LPJ_T0046967.1 MGP_LPJ_G0023489.1 mouse_genomes_project 17 34947661 34950628 + Ager protein_coding retained_intron MGP_LPJ_T0046968.1 MGP_LPJ_G0023489.1 mouse_genomes_project 17 34947661 34950628 + Ager protein_coding retained_intron MGP_LPJ_T0046969.1 MGP_LPJ_G0023489.1 mouse_genomes_project 17 34947661 34950664 + Ager protein_coding retained_intron MGP_LPJ_T0046970.1 MGP_LPJ_G0023489.1 mouse_genomes_project 17 34947661 34950628 + Ager protein_coding retained_intron MGP_LPJ_T0046971.1 MGP_LPJ_G0023489.1 mouse_genomes_project 17 34947661 34950628 + Ager protein_coding retained_intron MGP_LPJ_T0046972.1 MGP_LPJ_G0023489.1 mouse_genomes_project 17 34947661 34950628 + Ager protein_coding retained_intron MGP_LPJ_T0046973.1 MGP_LPJ_G0023489.1 mouse_genomes_project 17 34947661 34950664 + MGP_LPJ_P0046973 Ager protein_coding protein_coding MGP_LPJ_T0046974.1 MGP_LPJ_G0023489.1 mouse_genomes_project 17 34947661 34950664 + MGP_LPJ_P0046974 Ager protein_coding nonsense_mediated_decay MGP_LPJ_T0003739.1 MGP_LPJ_G0003371.1 mouse_genomes_project 17 26006743 26014970 - 1700049J03Rik antisense antisense MGP_LPJ_T0003741.1 MGP_LPJ_G0003373.1 mouse_genomes_project 17 26597381 26600396 - antisense antisense MGP_LPJ_T0003747.1 MGP_LPJ_G0003379.1 mouse_genomes_project 17 28659470 28673085 + Gm16191 antisense antisense MGP_LPJ_T0003748.1 MGP_LPJ_G0003379.1 mouse_genomes_project 17 28668366 28669024 + Gm16191 antisense antisense MGP_LPJ_T0047223.1 MGP_LPJ_G0023543.1 mouse_genomes_project 17 35722549 35731106 + MGP_LPJ_P0047223 Ddx39b protein_coding protein_coding MGP_LPJ_T0047224.1 MGP_LPJ_G0023543.1 mouse_genomes_project 17 35722555 35735449 + MGP_LPJ_P0047224 Ddx39b protein_coding protein_coding MGP_LPJ_T0047225.1 MGP_LPJ_G0023543.1 mouse_genomes_project 17 35722614 35731667 + Ddx39b protein_coding retained_intron MGP_LPJ_T0047226.1 MGP_LPJ_G0023543.1 mouse_genomes_project 17 35722679 35735422 + MGP_LPJ_P0047226 Ddx39b protein_coding protein_coding MGP_LPJ_T0047227.1 MGP_LPJ_G0023543.1 mouse_genomes_project 17 35722805 35724034 + Ddx39b protein_coding processed_transcript MGP_LPJ_T0047228.1 MGP_LPJ_G0023543.1 mouse_genomes_project 17 35723476 35735418 + MGP_LPJ_P0047228 Ddx39b protein_coding protein_coding MGP_LPJ_T0048439.1 MGP_LPJ_G0023948.1 mouse_genomes_project 17 82326647 82417487 - MGP_LPJ_P0048439 Strn protein_coding protein_coding MGP_LPJ_T0048440.1 MGP_LPJ_G0023948.1 mouse_genomes_project 17 82341608 82360017 - MGP_LPJ_P0048440 Strn protein_coding protein_coding MGP_LPJ_T0048133.1 MGP_LPJ_G0023839.1 mouse_genomes_project 17 58998665 59000973 - MGP_LPJ_P0048133 2410015M20Rik protein_coding protein_coding MGP_LPJ_T0047800.1 MGP_LPJ_G0023734.1 mouse_genomes_project 17 48425266 48433413 - MGP_LPJ_P0047800 Rrp36 protein_coding protein_coding MGP_LPJ_T0045696.1 MGP_LPJ_G0023186.1 mouse_genomes_project 17 23141973 23156996 + MGP_LPJ_P0045696 protein_coding protein_coding MGP_LPJ_T0017492.1 MGP_LPJ_G0015257.1 mouse_genomes_project 17 23692928 23702933 - D330041H03Rik processed_transcript antisense MGP_LPJ_T0017493.1 MGP_LPJ_G0015257.1 mouse_genomes_project 17 23697815 23703017 - D330041H03Rik processed_transcript antisense MGP_LPJ_T0017494.1 MGP_LPJ_G0015257.1 mouse_genomes_project 17 23697831 23702911 - D330041H03Rik processed_transcript antisense MGP_LPJ_T0017495.1 MGP_LPJ_G0015257.1 mouse_genomes_project 17 23700534 23702136 - D330041H03Rik processed_transcript processed_transcript MGP_LPJ_T0017496.1 MGP_LPJ_G0015257.1 mouse_genomes_project 17 23700542 23703067 - D330041H03Rik processed_transcript antisense MGP_LPJ_T0017497.1 MGP_LPJ_G0015257.1 mouse_genomes_project 17 23700929 23702931 - D330041H03Rik processed_transcript retained_intron MGP_LPJ_T0017498.1 MGP_LPJ_G0015257.1 mouse_genomes_project 17 23701004 23702903 - D330041H03Rik processed_transcript antisense MGP_LPJ_T0045505.1 MGP_LPJ_G0023090.1 mouse_genomes_project 17 15370009 15431432 + MGP_LPJ_P0045505 Lix1 protein_coding protein_coding MGP_LPJ_T0045506.1 MGP_LPJ_G0023090.1 mouse_genomes_project 17 15419049 15431432 + Lix1 protein_coding processed_transcript MGP_LPJ_T0048530.1 MGP_LPJ_G0023989.1 mouse_genomes_project 17 88091422 88387078 - MGP_LPJ_P0048530 Thada protein_coding protein_coding MGP_LPJ_T0048172.1 MGP_LPJ_G0023862.1 mouse_genomes_project 17 59515588 59528856 - MGP_LPJ_P0048172 Dennd1c protein_coding protein_coding MGP_LPJ_T0048084.1 MGP_LPJ_G0023830.1 mouse_genomes_project 17 58632678 58642420 - MGP_LPJ_P0048084 Ticam1 protein_coding protein_coding MGP_LPJ_T0003716.1 MGP_LPJ_G0003360.1 mouse_genomes_project 17 4276575 4344068 + antisense antisense MGP_LPJ_T0003717.1 MGP_LPJ_G0003360.1 mouse_genomes_project 17 4276649 4291440 + antisense antisense MGP_LPJ_T0003718.1 MGP_LPJ_G0003360.1 mouse_genomes_project 17 4277166 4293459 + antisense antisense MGP_LPJ_T0048474.1 MGP_LPJ_G0023964.1 mouse_genomes_project 17 83765724 83799534 - MGP_LPJ_P0048474 Hnrnpll protein_coding protein_coding MGP_LPJ_T0048475.1 MGP_LPJ_G0023964.1 mouse_genomes_project 17 83765724 83799427 - MGP_LPJ_P0048475 Hnrnpll protein_coding protein_coding MGP_LPJ_T0048476.1 MGP_LPJ_G0023964.1 mouse_genomes_project 17 83766074 83799427 - MGP_LPJ_P0048476 Hnrnpll protein_coding nonsense_mediated_decay MGP_LPJ_T0048477.1 MGP_LPJ_G0023964.1 mouse_genomes_project 17 83766578 83771794 - Hnrnpll protein_coding retained_intron MGP_LPJ_T0048478.1 MGP_LPJ_G0023964.1 mouse_genomes_project 17 83773386 83799394 - Hnrnpll protein_coding retained_intron MGP_LPJ_T0048479.1 MGP_LPJ_G0023964.1 mouse_genomes_project 17 83781062 83799335 - Hnrnpll protein_coding retained_intron MGP_LPJ_T0048480.1 MGP_LPJ_G0023964.1 mouse_genomes_project 17 83787248 83799468 - Hnrnpll protein_coding retained_intron MGP_LPJ_T0048196.1 MGP_LPJ_G0023876.1 mouse_genomes_project 17 61358819 61365339 - Pdzph1 protein_coding retained_intron MGP_LPJ_T0048197.1 MGP_LPJ_G0023876.1 mouse_genomes_project 17 61358819 61480286 - MGP_LPJ_P0048197 Pdzph1 protein_coding protein_coding MGP_LPJ_T0048198.1 MGP_LPJ_G0023876.1 mouse_genomes_project 17 61358981 61375443 - MGP_LPJ_P0048198 Pdzph1 protein_coding protein_coding MGP_LPJ_T0048388.1 MGP_LPJ_G0023933.1 mouse_genomes_project 17 77581878 77681930 - MGP_LPJ_P0048388 Memo1 protein_coding unknown_likely_coding MGP_LPJ_T0048078.1 MGP_LPJ_G0023826.1 mouse_genomes_project 17 58529660 58537767 - MGP_LPJ_P0048078 Mydgf protein_coding protein_coding MGP_LPJ_T0048079.1 MGP_LPJ_G0023826.1 mouse_genomes_project 17 58532026 58537696 - Mydgf protein_coding retained_intron MGP_LPJ_T0048080.1 MGP_LPJ_G0023826.1 mouse_genomes_project 17 58533232 58537511 - Mydgf protein_coding processed_transcript MGP_LPJ_T0047555.1 MGP_LPJ_G0023660.1 mouse_genomes_project 17 41606830 41608422 - MGP_LPJ_P0047555 Pgk2 protein_coding protein_coding MGP_LPJ_T0045864.1 MGP_LPJ_G0023234.1 mouse_genomes_project 17 24213358 24217086 - MGP_LPJ_P0045864 Nubp2 protein_coding protein_coding MGP_LPJ_T0017483.1 MGP_LPJ_G0015252.1 mouse_genomes_project 17 8208041 8227412 + Gm16169 processed_transcript antisense MGP_LPJ_T0017484.1 MGP_LPJ_G0015252.1 mouse_genomes_project 17 8208046 8216790 + Gm16169 processed_transcript retained_intron MGP_LPJ_T0048033.1 MGP_LPJ_G0023802.1 mouse_genomes_project 17 56229808 56257667 - MGP_LPJ_P0048033 Sult1c1 protein_coding protein_coding MGP_LPJ_T0101980.1 MGP_LPJ_G0040017.1 mouse_genomes_project 17 38216022 38217480 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0045383.1 MGP_LPJ_G0023057.1 mouse_genomes_project 17 10163752 10254350 - MGP_LPJ_P0045383 Igf2r protein_coding protein_coding MGP_LPJ_T0045384.1 MGP_LPJ_G0023057.1 mouse_genomes_project 17 10178398 10181151 - MGP_LPJ_P0045384 Igf2r protein_coding nonsense_mediated_decay MGP_LPJ_T0045385.1 MGP_LPJ_G0023057.1 mouse_genomes_project 17 10232147 10236489 - MGP_LPJ_P0045385 Igf2r protein_coding protein_coding MGP_LPJ_T0045314.1 MGP_LPJ_G0023036.1 mouse_genomes_project 17 5449296 5476368 + MGP_LPJ_P0045314 Fgfr1op protein_coding protein_coding MGP_LPJ_T0045315.1 MGP_LPJ_G0023036.1 mouse_genomes_project 17 5449296 5476697 + MGP_LPJ_P0045315 Fgfr1op protein_coding protein_coding MGP_LPJ_T0045316.1 MGP_LPJ_G0023036.1 mouse_genomes_project 17 5462479 5474838 + MGP_LPJ_P0045316 Fgfr1op protein_coding protein_coding MGP_LPJ_T0013257.1 MGP_LPJ_G0011348.1 mouse_genomes_project 17 69337932 69338286 - processed_pseudogene processed_pseudogene MGP_LPJ_T0047533.1 MGP_LPJ_G0023643.1 mouse_genomes_project 17 39073214 39080743 - MGP_LPJ_P0047533 Olfr131 protein_coding protein_coding MGP_LPJ_T0047534.1 MGP_LPJ_G0023643.1 mouse_genomes_project 17 39073214 39074244 - MGP_LPJ_P0047534 Olfr131 protein_coding protein_coding MGP_LPJ_T0047453.1 MGP_LPJ_G0023598.1 mouse_genomes_project 17 37865314 37868842 - MGP_LPJ_P0047453 2410137M14Rik protein_coding protein_coding MGP_LPJ_T0047454.1 MGP_LPJ_G0023598.1 mouse_genomes_project 17 37865451 37868822 - MGP_LPJ_P0047454 2410137M14Rik protein_coding protein_coding MGP_LPJ_T0045396.1 MGP_LPJ_G0023060.1 mouse_genomes_project 17 10387886 10426578 - MGP_LPJ_P0045396 Pnldc1 protein_coding protein_coding MGP_LPJ_T0098009.1 MGP_LPJ_G0036290.1 mouse_genomes_project 17 94792640 94793253 + pseudogene pseudogene MGP_LPJ_T0101499.1 MGP_LPJ_G0039637.1 mouse_genomes_project 17 32100118 32116191 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101500.1 MGP_LPJ_G0039637.1 mouse_genomes_project 17 32100536 32137692 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0101501.1 MGP_LPJ_G0039637.1 mouse_genomes_project 17 32102782 32145645 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0048157.1 MGP_LPJ_G0023857.1 mouse_genomes_project 17 59427893 59435830 - MGP_LPJ_P0048157 Gtf2f1 protein_coding protein_coding MGP_LPJ_T0045381.1 MGP_LPJ_G0023055.1 mouse_genomes_project 17 10058028 10100626 + MGP_LPJ_P0045381 Slc22a2 protein_coding protein_coding MGP_LPJ_T0100466.1 MGP_LPJ_G0038729.1 mouse_genomes_project 17 24037850 24037978 - Snora78 snoRNA snoRNA MGP_LPJ_T0047870.1 MGP_LPJ_G0023759.1 mouse_genomes_project 17 49466154 49481420 + MGP_LPJ_P0047870 Med20 protein_coding protein_coding MGP_LPJ_T0047871.1 MGP_LPJ_G0023759.1 mouse_genomes_project 17 49466157 49475353 + Med20 protein_coding retained_intron MGP_LPJ_T0047874.1 MGP_LPJ_G0023759.1 mouse_genomes_project 17 49466180 49481250 + Med20 protein_coding retained_intron MGP_LPJ_T0047876.1 MGP_LPJ_G0023759.1 mouse_genomes_project 17 49466193 49467868 + Med20 protein_coding retained_intron MGP_LPJ_T0011445.1 MGP_LPJ_G0009563.1 mouse_genomes_project 17 48142620 48142944 + Gm23037 misc_RNA misc_RNA MGP_LPJ_T0010233.1 MGP_LPJ_G0008351.1 mouse_genomes_project 17 58797604 58797668 - Mir6977 miRNA miRNA MGP_LPJ_T0098004.1 MGP_LPJ_G0036285.1 mouse_genomes_project 17 33630462 33631832 + pseudogene pseudogene MGP_LPJ_T0047013.1 MGP_LPJ_G0023499.1 mouse_genomes_project 17 35226458 35242235 - Stk19 protein_coding processed_transcript MGP_LPJ_T0047014.1 MGP_LPJ_G0023499.1 mouse_genomes_project 17 35240797 35258849 - MGP_LPJ_P0047014 Stk19 protein_coding protein_coding MGP_LPJ_T0047015.1 MGP_LPJ_G0023499.1 mouse_genomes_project 17 35240799 35242916 - Stk19 protein_coding retained_intron MGP_LPJ_T0047016.1 MGP_LPJ_G0023499.1 mouse_genomes_project 17 35253672 35258831 - Stk19 protein_coding retained_intron MGP_LPJ_T0047017.1 MGP_LPJ_G0023499.1 mouse_genomes_project 17 35254358 35258658 - Stk19 protein_coding retained_intron MGP_LPJ_T0048240.1 MGP_LPJ_G0023892.1 mouse_genomes_project 17 68844510 68965757 - MGP_LPJ_P0048240 Ankrd12 protein_coding protein_coding MGP_LPJ_T0048241.1 MGP_LPJ_G0023892.1 mouse_genomes_project 17 68845022 68849373 - Ankrd12 protein_coding processed_transcript MGP_LPJ_T0048242.1 MGP_LPJ_G0023892.1 mouse_genomes_project 17 68852785 68859697 - Ankrd12 protein_coding processed_transcript MGP_LPJ_T0048243.1 MGP_LPJ_G0023892.1 mouse_genomes_project 17 68863787 68965733 - MGP_LPJ_P0048243 Ankrd12 protein_coding protein_coding MGP_LPJ_T0048244.1 MGP_LPJ_G0023892.1 mouse_genomes_project 17 68899448 68965755 - Ankrd12 protein_coding retained_intron MGP_LPJ_T0048245.1 MGP_LPJ_G0023892.1 mouse_genomes_project 17 68923193 68965800 - Ankrd12 protein_coding retained_intron MGP_LPJ_T0048246.1 MGP_LPJ_G0023892.1 mouse_genomes_project 17 68923534 68965750 - Ankrd12 protein_coding retained_intron MGP_LPJ_T0048247.1 MGP_LPJ_G0023892.1 mouse_genomes_project 17 68936400 68937255 - Ankrd12 protein_coding processed_transcript MGP_LPJ_T0045706.1 MGP_LPJ_G0023191.1 mouse_genomes_project 17 23257851 23262427 - MGP_LPJ_P0045706 Prss22 protein_coding protein_coding MGP_LPJ_T0047029.1 MGP_LPJ_G0023501.1 mouse_genomes_project 17 35261900 35272883 - Skiv2l protein_coding retained_intron MGP_LPJ_T0047030.1 MGP_LPJ_G0023501.1 mouse_genomes_project 17 35261916 35272883 - MGP_LPJ_P0047030 Skiv2l protein_coding protein_coding MGP_LPJ_T0047031.1 MGP_LPJ_G0023501.1 mouse_genomes_project 17 35261921 35272865 - Skiv2l protein_coding retained_intron MGP_LPJ_T0047032.1 MGP_LPJ_G0023501.1 mouse_genomes_project 17 35261969 35272871 - Skiv2l protein_coding retained_intron MGP_LPJ_T0047033.1 MGP_LPJ_G0023501.1 mouse_genomes_project 17 35263202 35263801 - Skiv2l protein_coding retained_intron MGP_LPJ_T0047034.1 MGP_LPJ_G0023501.1 mouse_genomes_project 17 35263274 35265538 - MGP_LPJ_P0047034 Skiv2l protein_coding protein_coding MGP_LPJ_T0047035.1 MGP_LPJ_G0023501.1 mouse_genomes_project 17 35264028 35267129 - Skiv2l protein_coding retained_intron MGP_LPJ_T0047036.1 MGP_LPJ_G0023501.1 mouse_genomes_project 17 35267699 35269866 - Skiv2l protein_coding retained_intron MGP_LPJ_T0047037.1 MGP_LPJ_G0023501.1 mouse_genomes_project 17 35267776 35269312 - Skiv2l protein_coding retained_intron MGP_LPJ_T0047038.1 MGP_LPJ_G0023501.1 mouse_genomes_project 17 35267912 35268704 - Skiv2l protein_coding retained_intron MGP_LPJ_T0047039.1 MGP_LPJ_G0023501.1 mouse_genomes_project 17 35269194 35272868 - MGP_LPJ_P0047039 Skiv2l protein_coding nonsense_mediated_decay MGP_LPJ_T0048575.1 MGP_LPJ_G0024010.1 mouse_genomes_project 17 91256079 91287225 + MGP_LPJ_P0048575 Socs5 protein_coding protein_coding MGP_LPJ_T0047255.1 MGP_LPJ_G0023553.1 mouse_genomes_project 17 36128497 36130000 + MGP_LPJ_P0047255 2300002M23Rik protein_coding protein_coding MGP_LPJ_T0047256.1 MGP_LPJ_G0023553.1 mouse_genomes_project 17 36128532 36129978 + 2300002M23Rik protein_coding retained_intron MGP_LPJ_T0046661.1 MGP_LPJ_G0023420.1 mouse_genomes_project 17 32879988 32895517 - MGP_LPJ_P0046661 Zfp811 protein_coding protein_coding MGP_LPJ_T0046662.1 MGP_LPJ_G0023420.1 mouse_genomes_project 17 32882175 32885708 - MGP_LPJ_P0046662 Zfp811 protein_coding protein_coding MGP_LPJ_T0046622.1 MGP_LPJ_G0023408.1 mouse_genomes_project 17 32363005 32380380 - MGP_LPJ_P0046622 Akap8 protein_coding protein_coding MGP_LPJ_T0006933.1 MGP_LPJ_G0005713.1 mouse_genomes_project 17 28196601 28198692 + E230001N04Rik lincRNA lincRNA MGP_LPJ_T0006934.1 MGP_LPJ_G0005713.1 mouse_genomes_project 17 28196637 28198692 + E230001N04Rik lincRNA lincRNA MGP_LPJ_T0046055.1 MGP_LPJ_G0023278.1 mouse_genomes_project 17 25226856 25229830 + MGP_LPJ_P0046055 Jmjd8 protein_coding protein_coding MGP_LPJ_T0046056.1 MGP_LPJ_G0023278.1 mouse_genomes_project 17 25227032 25229832 + MGP_LPJ_P0046056 Jmjd8 protein_coding protein_coding MGP_LPJ_T0046057.1 MGP_LPJ_G0023278.1 mouse_genomes_project 17 25227053 25228140 + Jmjd8 protein_coding retained_intron MGP_LPJ_T0046058.1 MGP_LPJ_G0023278.1 mouse_genomes_project 17 25227060 25228615 + MGP_LPJ_P0046058 Jmjd8 protein_coding nonsense_mediated_decay MGP_LPJ_T0046059.1 MGP_LPJ_G0023278.1 mouse_genomes_project 17 25227109 25228623 + MGP_LPJ_P0046059 Jmjd8 protein_coding protein_coding MGP_LPJ_T0046060.1 MGP_LPJ_G0023278.1 mouse_genomes_project 17 25227110 25228351 + Jmjd8 protein_coding retained_intron MGP_LPJ_T0046061.1 MGP_LPJ_G0023278.1 mouse_genomes_project 17 25227286 25228516 + Jmjd8 protein_coding retained_intron MGP_LPJ_T0046062.1 MGP_LPJ_G0023278.1 mouse_genomes_project 17 25227828 25228711 + Jmjd8 protein_coding retained_intron MGP_LPJ_T0047610.1 MGP_LPJ_G0023691.1 mouse_genomes_project 17 45687150 45696626 - MGP_LPJ_P0047610 Enpp4 protein_coding protein_coding MGP_LPJ_T0047611.1 MGP_LPJ_G0023691.1 mouse_genomes_project 17 45687158 45696581 - MGP_LPJ_P0047611 Enpp4 protein_coding protein_coding MGP_LPJ_T0047885.1 MGP_LPJ_G0023764.1 mouse_genomes_project 17 49552680 49555676 - MGP_LPJ_P0047885 protein_coding protein_coding MGP_LPJ_T0047886.1 MGP_LPJ_G0023764.1 mouse_genomes_project 17 49552680 49556666 - MGP_LPJ_P0047886 protein_coding protein_coding MGP_LPJ_T0047887.1 MGP_LPJ_G0023764.1 mouse_genomes_project 17 49552782 49555096 - protein_coding retained_intron MGP_LPJ_T0047889.1 MGP_LPJ_G0023764.1 mouse_genomes_project 17 49553741 49555603 - MGP_LPJ_P0047889 protein_coding protein_coding MGP_LPJ_T0047890.1 MGP_LPJ_G0023764.1 mouse_genomes_project 17 49556415 49558935 - protein_coding retained_intron MGP_LPJ_T0047415.1 MGP_LPJ_G0023584.1 mouse_genomes_project 17 37477370 37480752 - MGP_LPJ_P0047415 H2-M9 protein_coding protein_coding MGP_LPJ_T0047416.1 MGP_LPJ_G0023584.1 mouse_genomes_project 17 37478491 37480752 - MGP_LPJ_P0047416 H2-M9 protein_coding protein_coding MGP_LPJ_T0048223.1 MGP_LPJ_G0023888.1 mouse_genomes_project 17 68509165 68641147 - MGP_LPJ_P0048223 Rab31 protein_coding protein_coding MGP_LPJ_T0045543.1 MGP_LPJ_G0023112.1 mouse_genomes_project 17 18288041 18323437 + MGP_LPJ_P0045543 protein_coding protein_coding MGP_LPJ_T0013211.1 MGP_LPJ_G0011302.1 mouse_genomes_project 17 23706910 23713463 + processed_pseudogene processed_pseudogene MGP_LPJ_T0003735.1 MGP_LPJ_G0003368.1 mouse_genomes_project 17 23048021 23053476 - Gm15947 antisense antisense MGP_LPJ_T0048533.1 MGP_LPJ_G0023992.1 mouse_genomes_project 17 88600102 88626335 - MGP_LPJ_P0048533 Abcg5 protein_coding protein_coding MGP_LPJ_T0048534.1 MGP_LPJ_G0023992.1 mouse_genomes_project 17 88600356 88625526 - MGP_LPJ_P0048534 Abcg5 protein_coding protein_coding MGP_LPJ_T0048535.1 MGP_LPJ_G0023992.1 mouse_genomes_project 17 88612316 88616765 - Abcg5 protein_coding processed_transcript MGP_LPJ_T0048536.1 MGP_LPJ_G0023992.1 mouse_genomes_project 17 88612794 88618849 - Abcg5 protein_coding retained_intron MGP_LPJ_T0047559.1 MGP_LPJ_G0023664.1 mouse_genomes_project 17 41989596 41993687 + MGP_LPJ_P0047559 Esp6 protein_coding protein_coding MGP_LPJ_T0047136.1 MGP_LPJ_G0023521.1 mouse_genomes_project 17 35528198 35531688 - MGP_LPJ_P0047136 G6b protein_coding protein_coding MGP_LPJ_T0047137.1 MGP_LPJ_G0023521.1 mouse_genomes_project 17 35529837 35531674 - MGP_LPJ_P0047137 G6b protein_coding protein_coding MGP_LPJ_T0047973.1 MGP_LPJ_G0023785.1 mouse_genomes_project 17 50454876 50468652 + MGP_LPJ_P0047973 Unc5cl protein_coding protein_coding MGP_LPJ_T0047974.1 MGP_LPJ_G0023785.1 mouse_genomes_project 17 50462322 50468646 + MGP_LPJ_P0047974 Unc5cl protein_coding nonsense_mediated_decay MGP_LPJ_T0047975.1 MGP_LPJ_G0023785.1 mouse_genomes_project 17 50462347 50553455 + MGP_LPJ_P0047975 Unc5cl protein_coding nonsense_mediated_decay MGP_LPJ_T0047976.1 MGP_LPJ_G0023785.1 mouse_genomes_project 17 50462353 50465005 + MGP_LPJ_P0047976 Unc5cl protein_coding protein_coding MGP_LPJ_T0047977.1 MGP_LPJ_G0023785.1 mouse_genomes_project 17 50462371 50468644 + MGP_LPJ_P0047977 Unc5cl protein_coding nonsense_mediated_decay MGP_LPJ_T0047978.1 MGP_LPJ_G0023785.1 mouse_genomes_project 17 50462391 50553348 + MGP_LPJ_P0047978 Unc5cl protein_coding nonsense_mediated_decay MGP_LPJ_T0046191.1 MGP_LPJ_G0023304.1 mouse_genomes_project 17 25721113 25721896 - MGP_LPJ_P0046191 protein_coding protein_coding MGP_LPJ_T0046193.1 MGP_LPJ_G0023304.1 mouse_genomes_project 17 25721154 25721760 - protein_coding retained_intron MGP_LPJ_T0047246.1 MGP_LPJ_G0023550.1 mouse_genomes_project 17 36071827 36087406 + MGP_LPJ_P0047246 Cchcr1 protein_coding protein_coding MGP_LPJ_T0047247.1 MGP_LPJ_G0023550.1 mouse_genomes_project 17 36071843 36076771 + Cchcr1 protein_coding retained_intron MGP_LPJ_T0047248.1 MGP_LPJ_G0023550.1 mouse_genomes_project 17 36071903 36087425 + MGP_LPJ_P0047248 Cchcr1 protein_coding protein_coding MGP_LPJ_T0047249.1 MGP_LPJ_G0023550.1 mouse_genomes_project 17 36072863 36087415 + MGP_LPJ_P0047249 Cchcr1 protein_coding protein_coding MGP_LPJ_T0047250.1 MGP_LPJ_G0023550.1 mouse_genomes_project 17 36076127 36077402 + Cchcr1 protein_coding processed_transcript MGP_LPJ_T0047251.1 MGP_LPJ_G0023550.1 mouse_genomes_project 17 36081098 36081851 + Cchcr1 protein_coding retained_intron MGP_LPJ_T0047252.1 MGP_LPJ_G0023550.1 mouse_genomes_project 17 36085305 36085843 + Cchcr1 protein_coding retained_intron MGP_LPJ_T0098205.1 MGP_LPJ_G0036486.1 mouse_genomes_project 17 99227885 99227992 + Gm23964 rRNA rRNA MGP_LPJ_T0013280.1 MGP_LPJ_G0011371.1 mouse_genomes_project 17 96956553 96958327 - processed_pseudogene processed_pseudogene MGP_LPJ_T0045570.1 MGP_LPJ_G0023133.1 mouse_genomes_project 17 19649084 19650044 - MGP_LPJ_P0045570 Vmn1r233 protein_coding protein_coding MGP_LPJ_T0001026.1 MGP_LPJ_G0000951.1 mouse_genomes_project 17 56488992 56489318 + TEC TEC MGP_LPJ_T0045582.1 MGP_LPJ_G0023142.1 mouse_genomes_project 17 20225712 20245411 + MGP_LPJ_P0045582 Zfp53 protein_coding protein_coding MGP_LPJ_T0013223.1 MGP_LPJ_G0011314.1 mouse_genomes_project 17 36981357 36981823 + processed_pseudogene processed_pseudogene MGP_LPJ_T0006913.1 MGP_LPJ_G0005695.1 mouse_genomes_project 17 12881029 12891306 + Gm28873 lincRNA lincRNA MGP_LPJ_T0048470.1 MGP_LPJ_G0023961.1 mouse_genomes_project 17 83344689 83346776 + MGP_LPJ_P0048470 4921513D11Rik protein_coding protein_coding MGP_LPJ_T0046434.1 MGP_LPJ_G0023362.1 mouse_genomes_project 17 28706123 28751732 - MGP_LPJ_P0046434 Stk38 protein_coding protein_coding MGP_LPJ_T0046435.1 MGP_LPJ_G0023362.1 mouse_genomes_project 17 28706255 28708316 - Stk38 protein_coding processed_transcript MGP_LPJ_T0046436.1 MGP_LPJ_G0023362.1 mouse_genomes_project 17 28707475 28751732 - MGP_LPJ_P0046436 Stk38 protein_coding protein_coding MGP_LPJ_T0046437.1 MGP_LPJ_G0023362.1 mouse_genomes_project 17 28708177 28720555 - Stk38 protein_coding retained_intron MGP_LPJ_T0046438.1 MGP_LPJ_G0023362.1 mouse_genomes_project 17 28708330 28709958 - Stk38 protein_coding processed_transcript MGP_LPJ_T0046439.1 MGP_LPJ_G0023362.1 mouse_genomes_project 17 28709520 28720844 - Stk38 protein_coding retained_intron MGP_LPJ_T0046440.1 MGP_LPJ_G0023362.1 mouse_genomes_project 17 28709581 28715453 - Stk38 protein_coding processed_transcript MGP_LPJ_T0046441.1 MGP_LPJ_G0023362.1 mouse_genomes_project 17 28709581 28715988 - Stk38 protein_coding processed_transcript MGP_LPJ_T0046442.1 MGP_LPJ_G0023362.1 mouse_genomes_project 17 28709809 28715738 - Stk38 protein_coding processed_transcript MGP_LPJ_T0046443.1 MGP_LPJ_G0023362.1 mouse_genomes_project 17 28713370 28715723 - Stk38 protein_coding processed_transcript MGP_LPJ_T0046444.1 MGP_LPJ_G0023362.1 mouse_genomes_project 17 28715743 28751740 - Stk38 protein_coding processed_transcript MGP_LPJ_T0046445.1 MGP_LPJ_G0023362.1 mouse_genomes_project 17 28721918 28742134 - Stk38 protein_coding retained_intron MGP_LPJ_T0046446.1 MGP_LPJ_G0023362.1 mouse_genomes_project 17 28726301 28729792 - Stk38 protein_coding processed_transcript MGP_LPJ_T0046447.1 MGP_LPJ_G0023362.1 mouse_genomes_project 17 28729778 28751530 - Stk38 protein_coding processed_transcript MGP_LPJ_T0046448.1 MGP_LPJ_G0023362.1 mouse_genomes_project 17 28739642 28751691 - Stk38 protein_coding processed_transcript MGP_LPJ_T0046751.1 MGP_LPJ_G0023446.1 mouse_genomes_project 17 34023677 34035989 + MGP_LPJ_P0046751 Kank3 protein_coding protein_coding MGP_LPJ_T0046752.1 MGP_LPJ_G0023446.1 mouse_genomes_project 17 34023680 34035988 + MGP_LPJ_P0046752 Kank3 protein_coding protein_coding MGP_LPJ_T0046753.1 MGP_LPJ_G0023446.1 mouse_genomes_project 17 34023680 34035985 + MGP_LPJ_P0046753 Kank3 protein_coding protein_coding MGP_LPJ_T0046754.1 MGP_LPJ_G0023446.1 mouse_genomes_project 17 34023686 34035229 + Kank3 protein_coding retained_intron MGP_LPJ_T0046756.1 MGP_LPJ_G0023446.1 mouse_genomes_project 17 34034900 34035346 + Kank3 protein_coding retained_intron MGP_LPJ_T0046757.1 MGP_LPJ_G0023446.1 mouse_genomes_project 17 34035213 34035988 + MGP_LPJ_P0046757 Kank3 protein_coding protein_coding MGP_LPJ_T0011452.1 MGP_LPJ_G0009570.1 mouse_genomes_project 17 83942641 83942888 - Gm25706 misc_RNA misc_RNA MGP_LPJ_T0013198.1 MGP_LPJ_G0011289.1 mouse_genomes_project 17 6671194 6672181 - processed_pseudogene processed_pseudogene MGP_LPJ_T0048552.1 MGP_LPJ_G0023998.1 mouse_genomes_project 17 89075323 89457919 + MGP_LPJ_P0048552 Camkmt protein_coding protein_coding MGP_LPJ_T0010244.1 MGP_LPJ_G0008362.1 mouse_genomes_project 17 94592590 94593344 + miRNA miRNA MGP_LPJ_T0047674.1 MGP_LPJ_G0023705.1 mouse_genomes_project 17 47303585 47333274 - MGP_LPJ_P0047674 Capn11 protein_coding protein_coding MGP_LPJ_T0047675.1 MGP_LPJ_G0023705.1 mouse_genomes_project 17 47317718 47333246 - MGP_LPJ_P0047675 Capn11 protein_coding non_stop_decay MGP_LPJ_T0048507.1 MGP_LPJ_G0023981.1 mouse_genomes_project 17 86333827 86334244 + MGP_LPJ_P0048507 Gm6594 protein_coding protein_coding MGP_LPJ_T0048029.1 MGP_LPJ_G0023800.1 mouse_genomes_project 17 55951829 55966380 - MGP_LPJ_P0048029 Sgol1 protein_coding protein_coding MGP_LPJ_T0048030.1 MGP_LPJ_G0023800.1 mouse_genomes_project 17 55964607 55966333 - Sgol1 protein_coding processed_transcript MGP_LPJ_T0048031.1 MGP_LPJ_G0023800.1 mouse_genomes_project 17 55964754 55966325 - Sgol1 protein_coding processed_transcript MGP_LPJ_T0046065.1 MGP_LPJ_G0023281.1 mouse_genomes_project 17 25232454 25235285 - MGP_LPJ_P0046065 Rhbdl1 protein_coding protein_coding MGP_LPJ_T0046066.1 MGP_LPJ_G0023281.1 mouse_genomes_project 17 25232591 25235072 - MGP_LPJ_P0046066 Rhbdl1 protein_coding protein_coding MGP_LPJ_T0046067.1 MGP_LPJ_G0023281.1 mouse_genomes_project 17 25233762 25235241 - MGP_LPJ_P0046067 Rhbdl1 protein_coding protein_coding MGP_LPJ_T0046928.1 MGP_LPJ_G0023482.1 mouse_genomes_project 17 34656715 34665360 + MGP_LPJ_P0046928 Btnl1 protein_coding protein_coding MGP_LPJ_T0047793.1 MGP_LPJ_G0023733.1 mouse_genomes_project 17 48407923 48421880 + MGP_LPJ_P0047793 Cul7 protein_coding protein_coding MGP_LPJ_T0047794.1 MGP_LPJ_G0023733.1 mouse_genomes_project 17 48408149 48412442 + Cul7 protein_coding retained_intron MGP_LPJ_T0047795.1 MGP_LPJ_G0023733.1 mouse_genomes_project 17 48408158 48414576 + Cul7 protein_coding retained_intron MGP_LPJ_T0047796.1 MGP_LPJ_G0023733.1 mouse_genomes_project 17 48409009 48421880 + MGP_LPJ_P0047796 Cul7 protein_coding nonsense_mediated_decay MGP_LPJ_T0047797.1 MGP_LPJ_G0023733.1 mouse_genomes_project 17 48410445 48413146 + Cul7 protein_coding processed_transcript MGP_LPJ_T0047798.1 MGP_LPJ_G0023733.1 mouse_genomes_project 17 48410487 48421880 + MGP_LPJ_P0047798 Cul7 protein_coding nonsense_mediated_decay MGP_LPJ_T0047799.1 MGP_LPJ_G0023733.1 mouse_genomes_project 17 48419297 48421880 + Cul7 protein_coding retained_intron MGP_LPJ_T0098006.1 MGP_LPJ_G0036287.1 mouse_genomes_project 17 38592482 38593447 - pseudogene pseudogene MGP_LPJ_T0101957.1 MGP_LPJ_G0039994.1 mouse_genomes_project 17 35872052 35873036 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0048239.1 MGP_LPJ_G0023891.1 mouse_genomes_project 17 68797635 68826774 - MGP_LPJ_P0048239 Twsg1 protein_coding protein_coding MGP_LPJ_T0013224.1 MGP_LPJ_G0011315.1 mouse_genomes_project 17 37012680 37012993 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099234.1 MGP_LPJ_G0037497.1 mouse_genomes_project 17 76266643 76266750 + Gm23649 snRNA snRNA MGP_LPJ_T0048050.1 MGP_LPJ_G0023815.1 mouse_genomes_project 17 58342466 58352380 - MGP_LPJ_P0048050 Stap2 protein_coding protein_coding MGP_LPJ_T0006980.1 MGP_LPJ_G0005746.1 mouse_genomes_project 17 56618771 56637105 - 1700025K24Rik lincRNA lincRNA MGP_LPJ_T0047006.1 MGP_LPJ_G0023496.1 mouse_genomes_project 17 35000915 35008844 + MGP_LPJ_P0047006 Atf6b protein_coding protein_coding MGP_LPJ_T0047007.1 MGP_LPJ_G0023496.1 mouse_genomes_project 17 35000970 35002917 + MGP_LPJ_P0047007 Atf6b protein_coding nonsense_mediated_decay MGP_LPJ_T0047008.1 MGP_LPJ_G0023496.1 mouse_genomes_project 17 35000970 35002972 + MGP_LPJ_P0047008 Atf6b protein_coding nonsense_mediated_decay MGP_LPJ_T0047009.1 MGP_LPJ_G0023496.1 mouse_genomes_project 17 35000980 35008649 + MGP_LPJ_P0047009 Atf6b protein_coding protein_coding MGP_LPJ_T0047010.1 MGP_LPJ_G0023496.1 mouse_genomes_project 17 35005396 35005873 + Atf6b protein_coding retained_intron MGP_LPJ_T0047931.1 MGP_LPJ_G0023772.1 mouse_genomes_project 17 50068068 50071013 - MGP_LPJ_P0047931 protein_coding protein_coding MGP_LPJ_T0045823.1 MGP_LPJ_G0023219.1 mouse_genomes_project 17 23985392 23997678 + MGP_LPJ_P0045823 Zfp598 protein_coding protein_coding MGP_LPJ_T0048183.1 MGP_LPJ_G0023870.1 mouse_genomes_project 17 59702479 59716982 + MGP_LPJ_P0048183 Trip10 protein_coding protein_coding MGP_LPJ_T0048184.1 MGP_LPJ_G0023870.1 mouse_genomes_project 17 59702576 59716433 + MGP_LPJ_P0048184 Trip10 protein_coding unknown_likely_coding MGP_LPJ_T0003770.1 MGP_LPJ_G0003395.1 mouse_genomes_project 17 36435591 36442334 - Ppp1r18os antisense antisense MGP_LPJ_T0047839.1 MGP_LPJ_G0023751.1 mouse_genomes_project 17 49204430 49212219 + MGP_LPJ_P0047839 Guca1b protein_coding protein_coding MGP_LPJ_T0047840.1 MGP_LPJ_G0023751.1 mouse_genomes_project 17 49204441 49211345 + MGP_LPJ_P0047840 Guca1b protein_coding protein_coding MGP_LPJ_T0047635.1 MGP_LPJ_G0023699.1 mouse_genomes_project 17 47205657 47213341 - MGP_LPJ_P0047635 Tmem151b protein_coding protein_coding MGP_LPJ_T0101985.1 MGP_LPJ_G0040022.1 mouse_genomes_project 17 38350392 38351231 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0046924.1 MGP_LPJ_G0023479.1 mouse_genomes_project 17 34571511 34582890 + MGP_LPJ_P0046924 H2-Eb1 protein_coding protein_coding MGP_LPJ_T0048506.1 MGP_LPJ_G0023980.1 mouse_genomes_project 17 85246559 85246720 + MGP_LPJ_P0048506 Gm11096 protein_coding protein_coding MGP_LPJ_T0101971.1 MGP_LPJ_G0040008.1 mouse_genomes_project 17 37397122 37399776 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0046034.1 MGP_LPJ_G0023272.1 mouse_genomes_project 17 25173665 25179363 - MGP_LPJ_P0046034 Haghl protein_coding protein_coding MGP_LPJ_T0046035.1 MGP_LPJ_G0023272.1 mouse_genomes_project 17 25176611 25179405 - MGP_LPJ_P0046035 Haghl protein_coding protein_coding MGP_LPJ_T0046036.1 MGP_LPJ_G0023272.1 mouse_genomes_project 17 25176611 25179496 - MGP_LPJ_P0046036 Haghl protein_coding protein_coding MGP_LPJ_T0046037.1 MGP_LPJ_G0023272.1 mouse_genomes_project 17 25176612 25179158 - Haghl protein_coding retained_intron MGP_LPJ_T0046038.1 MGP_LPJ_G0023272.1 mouse_genomes_project 17 25176624 25179355 - Haghl protein_coding retained_intron MGP_LPJ_T0046039.1 MGP_LPJ_G0023272.1 mouse_genomes_project 17 25176645 25179390 - MGP_LPJ_P0046039 Haghl protein_coding protein_coding MGP_LPJ_T0046040.1 MGP_LPJ_G0023272.1 mouse_genomes_project 17 25176647 25179161 - MGP_LPJ_P0046040 Haghl protein_coding protein_coding MGP_LPJ_T0046041.1 MGP_LPJ_G0023272.1 mouse_genomes_project 17 25177362 25179390 - Haghl protein_coding retained_intron MGP_LPJ_T0046042.1 MGP_LPJ_G0023272.1 mouse_genomes_project 17 25177651 25179389 - Haghl protein_coding retained_intron MGP_LPJ_T0046043.1 MGP_LPJ_G0023272.1 mouse_genomes_project 17 25177955 25179128 - Haghl protein_coding retained_intron MGP_LPJ_T0046044.1 MGP_LPJ_G0023272.1 mouse_genomes_project 17 25178138 25179366 - MGP_LPJ_P0046044 Haghl protein_coding protein_coding MGP_LPJ_T0046387.1 MGP_LPJ_G0023349.1 mouse_genomes_project 17 28204204 28213779 + MGP_LPJ_P0046387 Armc12 protein_coding protein_coding MGP_LPJ_T0045332.1 MGP_LPJ_G0023040.1 mouse_genomes_project 17 5605987 5622845 + MGP_LPJ_P0045332 protein_coding protein_coding MGP_LPJ_T0047365.1 MGP_LPJ_G0023570.1 mouse_genomes_project 17 36507711 36509042 + protein_coding retained_intron MGP_LPJ_T0047366.1 MGP_LPJ_G0023570.1 mouse_genomes_project 17 36507856 36508618 + protein_coding processed_transcript MGP_LPJ_T0047367.1 MGP_LPJ_G0023570.1 mouse_genomes_project 17 36508059 36509636 + protein_coding retained_intron MGP_LPJ_T0047368.1 MGP_LPJ_G0023570.1 mouse_genomes_project 17 36508261 36524648 + MGP_LPJ_P0047368 protein_coding unknown_likely_coding MGP_LPJ_T0047369.1 MGP_LPJ_G0023570.1 mouse_genomes_project 17 36508275 36515571 + MGP_LPJ_P0047369 protein_coding protein_coding MGP_LPJ_T0047370.1 MGP_LPJ_G0023570.1 mouse_genomes_project 17 36517771 36521718 + protein_coding retained_intron MGP_LPJ_T0017505.1 MGP_LPJ_G0015264.1 mouse_genomes_project 17 34278364 34283903 - Gm20427 processed_transcript retained_intron MGP_LPJ_T0048121.1 MGP_LPJ_G0023838.1 mouse_genomes_project 17 58974700 58986383 + Safb protein_coding retained_intron MGP_LPJ_T0048122.1 MGP_LPJ_G0023838.1 mouse_genomes_project 17 58974849 58997428 + MGP_LPJ_P0048122 Safb protein_coding protein_coding MGP_LPJ_T0048123.1 MGP_LPJ_G0023838.1 mouse_genomes_project 17 58974857 58983596 + MGP_LPJ_P0048123 Safb protein_coding protein_coding MGP_LPJ_T0048124.1 MGP_LPJ_G0023838.1 mouse_genomes_project 17 58974934 58997508 + MGP_LPJ_P0048124 Safb protein_coding protein_coding MGP_LPJ_T0048125.1 MGP_LPJ_G0023838.1 mouse_genomes_project 17 58978711 58991943 + MGP_LPJ_P0048125 Safb protein_coding nonsense_mediated_decay MGP_LPJ_T0048126.1 MGP_LPJ_G0023838.1 mouse_genomes_project 17 58984351 58986371 + Safb protein_coding retained_intron MGP_LPJ_T0048127.1 MGP_LPJ_G0023838.1 mouse_genomes_project 17 58987622 58997494 + Safb protein_coding retained_intron MGP_LPJ_T0048128.1 MGP_LPJ_G0023838.1 mouse_genomes_project 17 58992099 58995629 + Safb protein_coding retained_intron MGP_LPJ_T0048129.1 MGP_LPJ_G0023838.1 mouse_genomes_project 17 58994190 58995764 + Safb protein_coding retained_intron MGP_LPJ_T0048130.1 MGP_LPJ_G0023838.1 mouse_genomes_project 17 58995579 58996862 + Safb protein_coding retained_intron MGP_LPJ_T0048131.1 MGP_LPJ_G0023838.1 mouse_genomes_project 17 58996442 58997508 + Safb protein_coding retained_intron MGP_LPJ_T0048132.1 MGP_LPJ_G0023838.1 mouse_genomes_project 17 58996948 58997488 + Safb protein_coding retained_intron MGP_LPJ_T0010237.1 MGP_LPJ_G0008355.1 mouse_genomes_project 17 67262577 67262679 + Mir6420 miRNA miRNA MGP_LPJ_T0047912.1 MGP_LPJ_G0023768.1 mouse_genomes_project 17 49692742 49711511 - MGP_LPJ_P0047912 Mdfi protein_coding protein_coding MGP_LPJ_T0047913.1 MGP_LPJ_G0023768.1 mouse_genomes_project 17 49692742 49711561 - MGP_LPJ_P0047913 Mdfi protein_coding protein_coding MGP_LPJ_T0047914.1 MGP_LPJ_G0023768.1 mouse_genomes_project 17 49692742 49712962 - MGP_LPJ_P0047914 Mdfi protein_coding protein_coding MGP_LPJ_T0047915.1 MGP_LPJ_G0023768.1 mouse_genomes_project 17 49693239 49711528 - Mdfi protein_coding processed_transcript MGP_LPJ_T0047916.1 MGP_LPJ_G0023768.1 mouse_genomes_project 17 49693357 49711439 - MGP_LPJ_P0047916 Mdfi protein_coding protein_coding MGP_LPJ_T0047917.1 MGP_LPJ_G0023768.1 mouse_genomes_project 17 49697074 49711531 - Mdfi protein_coding retained_intron MGP_LPJ_T0047918.1 MGP_LPJ_G0023768.1 mouse_genomes_project 17 49698113 49711542 - MGP_LPJ_P0047918 Mdfi protein_coding protein_coding MGP_LPJ_T0047919.1 MGP_LPJ_G0023768.1 mouse_genomes_project 17 49698202 49711515 - MGP_LPJ_P0047919 Mdfi protein_coding protein_coding MGP_LPJ_T0047920.1 MGP_LPJ_G0023768.1 mouse_genomes_project 17 49702727 49711500 - MGP_LPJ_P0047920 Mdfi protein_coding protein_coding MGP_LPJ_T0045909.1 MGP_LPJ_G0023240.1 mouse_genomes_project 17 24275274 24294525 - MGP_LPJ_P0045909 Hn1l protein_coding protein_coding MGP_LPJ_T0048537.1 MGP_LPJ_G0023993.1 mouse_genomes_project 17 88626444 88648329 + MGP_LPJ_P0048537 Abcg8 protein_coding protein_coding MGP_LPJ_T0048538.1 MGP_LPJ_G0023993.1 mouse_genomes_project 17 88626555 88646795 + MGP_LPJ_P0048538 Abcg8 protein_coding protein_coding MGP_LPJ_T0048550.1 MGP_LPJ_G0023997.1 mouse_genomes_project 17 89047716 89074865 - MGP_LPJ_P0048550 Prepl protein_coding protein_coding MGP_LPJ_T0048551.1 MGP_LPJ_G0023997.1 mouse_genomes_project 17 89047716 89074865 - MGP_LPJ_P0048551 Prepl protein_coding protein_coding MGP_LPJ_T0046724.1 MGP_LPJ_G0023441.1 mouse_genomes_project 17 33841611 33849262 + MGP_LPJ_P0046724 Pram1 protein_coding protein_coding MGP_LPJ_T0046725.1 MGP_LPJ_G0023441.1 mouse_genomes_project 17 33841650 33849256 + MGP_LPJ_P0046725 Pram1 protein_coding nonsense_mediated_decay MGP_LPJ_T0046726.1 MGP_LPJ_G0023441.1 mouse_genomes_project 17 33848372 33849194 + Pram1 protein_coding retained_intron MGP_LPJ_T0046006.1 MGP_LPJ_G0023265.1 mouse_genomes_project 17 24951652 25045557 + MGP_LPJ_P0046006 Lmf1 protein_coding protein_coding MGP_LPJ_T0046007.1 MGP_LPJ_G0023265.1 mouse_genomes_project 17 24951655 25045557 + MGP_LPJ_P0046007 Lmf1 protein_coding protein_coding MGP_LPJ_T0046008.1 MGP_LPJ_G0023265.1 mouse_genomes_project 17 24951665 24974653 + Lmf1 protein_coding retained_intron MGP_LPJ_T0046009.1 MGP_LPJ_G0023265.1 mouse_genomes_project 17 24951665 25045453 + MGP_LPJ_P0046009 Lmf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0046010.1 MGP_LPJ_G0023265.1 mouse_genomes_project 17 24951675 25035952 + MGP_LPJ_P0046010 Lmf1 protein_coding protein_coding MGP_LPJ_T0046011.1 MGP_LPJ_G0023265.1 mouse_genomes_project 17 24951677 24965331 + Lmf1 protein_coding retained_intron MGP_LPJ_T0046012.1 MGP_LPJ_G0023265.1 mouse_genomes_project 17 24951677 25016480 + Lmf1 protein_coding retained_intron MGP_LPJ_T0046013.1 MGP_LPJ_G0023265.1 mouse_genomes_project 17 24951677 25029111 + Lmf1 protein_coding retained_intron MGP_LPJ_T0046014.1 MGP_LPJ_G0023265.1 mouse_genomes_project 17 24951798 25012319 + Lmf1 protein_coding processed_transcript MGP_LPJ_T0046015.1 MGP_LPJ_G0023265.1 mouse_genomes_project 17 25036512 25037546 + MGP_LPJ_P0046015 Lmf1 protein_coding protein_coding MGP_LPJ_T0047493.1 MGP_LPJ_G0023608.1 mouse_genomes_project 17 38130567 38131872 - MGP_LPJ_P0047493 Olfr94 protein_coding protein_coding MGP_LPJ_T0045382.1 MGP_LPJ_G0023056.1 mouse_genomes_project 17 10127696 10155803 - MGP_LPJ_P0045382 Slc22a1 protein_coding protein_coding MGP_LPJ_T0006955.1 MGP_LPJ_G0005730.1 mouse_genomes_project 17 35636870 35638938 + Gm17705 lincRNA lincRNA MGP_LPJ_T0100472.1 MGP_LPJ_G0038735.1 mouse_genomes_project 17 35634314 35634448 - Gm23442 snoRNA snoRNA MGP_LPJ_T0013230.1 MGP_LPJ_G0011321.1 mouse_genomes_project 17 38834082 38836701 - processed_pseudogene processed_pseudogene MGP_LPJ_T0048140.1 MGP_LPJ_G0023845.1 mouse_genomes_project 17 59121753 59128240 + MGP_LPJ_P0048140 Ndufa11 protein_coding protein_coding MGP_LPJ_T0047317.1 MGP_LPJ_G0023564.1 mouse_genomes_project 17 36435991 36440850 + MGP_LPJ_P0047317 Nrm protein_coding protein_coding MGP_LPJ_T0047318.1 MGP_LPJ_G0023564.1 mouse_genomes_project 17 36436011 36440111 + MGP_LPJ_P0047318 Nrm protein_coding protein_coding MGP_LPJ_T0047319.1 MGP_LPJ_G0023564.1 mouse_genomes_project 17 36436159 36440051 + MGP_LPJ_P0047319 Nrm protein_coding protein_coding MGP_LPJ_T0045537.1 MGP_LPJ_G0023106.1 mouse_genomes_project 17 16347489 16379267 + MGP_LPJ_P0045537 Vmn2r93 protein_coding protein_coding MGP_LPJ_T0047827.1 MGP_LPJ_G0023749.1 mouse_genomes_project 17 48804133 48804394 - MGP_LPJ_P0047827 Gm16494 protein_coding protein_coding MGP_LPJ_T0045770.1 MGP_LPJ_G0023206.1 mouse_genomes_project 17 23735966 23741366 - Dnase1l2 protein_coding retained_intron MGP_LPJ_T0045771.1 MGP_LPJ_G0023206.1 mouse_genomes_project 17 23735972 23742270 - MGP_LPJ_P0045771 Dnase1l2 protein_coding protein_coding MGP_LPJ_T0045772.1 MGP_LPJ_G0023206.1 mouse_genomes_project 17 23738057 23742249 - MGP_LPJ_P0045772 Dnase1l2 protein_coding protein_coding MGP_LPJ_T0045773.1 MGP_LPJ_G0023206.1 mouse_genomes_project 17 23738248 23741318 - MGP_LPJ_P0045773 Dnase1l2 protein_coding nonsense_mediated_decay MGP_LPJ_T0045774.1 MGP_LPJ_G0023206.1 mouse_genomes_project 17 23740689 23741866 - MGP_LPJ_P0045774 Dnase1l2 protein_coding protein_coding MGP_LPJ_T0045775.1 MGP_LPJ_G0023206.1 mouse_genomes_project 17 23740887 23742269 - MGP_LPJ_P0045775 Dnase1l2 protein_coding nonsense_mediated_decay MGP_LPJ_T0003766.1 MGP_LPJ_G0003391.1 mouse_genomes_project 17 35593316 35597053 - Gm20522 antisense antisense MGP_LPJ_T0045548.1 MGP_LPJ_G0023117.1 mouse_genomes_project 17 18881934 18901464 - MGP_LPJ_P0045548 protein_coding protein_coding MGP_LPJ_T0047591.1 MGP_LPJ_G0023685.1 mouse_genomes_project 17 45128649 45162517 + MGP_LPJ_P0047591 Pla2g7 protein_coding protein_coding MGP_LPJ_T0047592.1 MGP_LPJ_G0023685.1 mouse_genomes_project 17 45128820 45176455 + MGP_LPJ_P0047592 Pla2g7 protein_coding protein_coding MGP_LPJ_T0047593.1 MGP_LPJ_G0023685.1 mouse_genomes_project 17 45129026 45156733 + MGP_LPJ_P0047593 Pla2g7 protein_coding protein_coding MGP_LPJ_T0047594.1 MGP_LPJ_G0023685.1 mouse_genomes_project 17 45129186 45151615 + Pla2g7 protein_coding processed_transcript MGP_LPJ_T0047595.1 MGP_LPJ_G0023685.1 mouse_genomes_project 17 45129224 45170108 + MGP_LPJ_P0047595 Pla2g7 protein_coding protein_coding MGP_LPJ_T0047596.1 MGP_LPJ_G0023685.1 mouse_genomes_project 17 45129266 45170483 + Pla2g7 protein_coding retained_intron MGP_LPJ_T0045270.1 MGP_LPJ_G0023013.1 mouse_genomes_project 17 3379566 3387794 + MGP_LPJ_P0045270 Gtf2h5 protein_coding protein_coding MGP_LPJ_T0045271.1 MGP_LPJ_G0023013.1 mouse_genomes_project 17 3379617 3382119 + Gtf2h5 protein_coding retained_intron MGP_LPJ_T0045272.1 MGP_LPJ_G0023013.1 mouse_genomes_project 17 3379710 3386407 + MGP_LPJ_P0045272 Gtf2h5 protein_coding protein_coding MGP_LPJ_T0046255.1 MGP_LPJ_G0023323.1 mouse_genomes_project 17 26621439 26632694 - MGP_LPJ_P0046255 Uqcc2 protein_coding protein_coding MGP_LPJ_T0046256.1 MGP_LPJ_G0023323.1 mouse_genomes_project 17 26621444 26632402 - Uqcc2 protein_coding processed_transcript MGP_LPJ_T0046257.1 MGP_LPJ_G0023323.1 mouse_genomes_project 17 26621446 26632681 - MGP_LPJ_P0046257 Uqcc2 protein_coding protein_coding MGP_LPJ_T0046258.1 MGP_LPJ_G0023323.1 mouse_genomes_project 17 26621446 26632408 - MGP_LPJ_P0046258 Uqcc2 protein_coding protein_coding MGP_LPJ_T0048496.1 MGP_LPJ_G0023975.1 mouse_genomes_project 17 84364716 84516117 - MGP_LPJ_P0048496 Map4k3 protein_coding unknown_likely_coding MGP_LPJ_T0048497.1 MGP_LPJ_G0023975.1 mouse_genomes_project 17 84364719 84516283 - MGP_LPJ_P0048497 Map4k3 protein_coding protein_coding MGP_LPJ_T0048498.1 MGP_LPJ_G0023975.1 mouse_genomes_project 17 84364719 84516283 - MGP_LPJ_P0048498 Map4k3 protein_coding protein_coding MGP_LPJ_T0047968.1 MGP_LPJ_G0023784.1 mouse_genomes_project 17 50447500 50451040 - Tspo2 protein_coding retained_intron MGP_LPJ_T0047969.1 MGP_LPJ_G0023784.1 mouse_genomes_project 17 50447976 50451070 - MGP_LPJ_P0047969 Tspo2 protein_coding protein_coding MGP_LPJ_T0047970.1 MGP_LPJ_G0023784.1 mouse_genomes_project 17 50448060 50449649 - MGP_LPJ_P0047970 Tspo2 protein_coding protein_coding MGP_LPJ_T0047971.1 MGP_LPJ_G0023784.1 mouse_genomes_project 17 50448109 50449646 - MGP_LPJ_P0047971 Tspo2 protein_coding protein_coding MGP_LPJ_T0047972.1 MGP_LPJ_G0023784.1 mouse_genomes_project 17 50449511 50451065 - Tspo2 protein_coding processed_transcript MGP_LPJ_T0048569.1 MGP_LPJ_G0024007.1 mouse_genomes_project 17 91101113 91139855 + MGP_LPJ_P0048569 Rhoq protein_coding protein_coding MGP_LPJ_T0048570.1 MGP_LPJ_G0024007.1 mouse_genomes_project 17 91101323 91134884 + MGP_LPJ_P0048570 Rhoq protein_coding protein_coding MGP_LPJ_T0045468.1 MGP_LPJ_G0023082.1 mouse_genomes_project 17 13193495 13201995 - MGP_LPJ_P0045468 Dll1 protein_coding protein_coding MGP_LPJ_T0045469.1 MGP_LPJ_G0023082.1 mouse_genomes_project 17 13193666 13194532 - Dll1 protein_coding retained_intron MGP_LPJ_T0045470.1 MGP_LPJ_G0023082.1 mouse_genomes_project 17 13196398 13197850 - Dll1 protein_coding processed_transcript MGP_LPJ_T0045471.1 MGP_LPJ_G0023082.1 mouse_genomes_project 17 13196751 13200091 - Dll1 protein_coding processed_transcript MGP_LPJ_T0045472.1 MGP_LPJ_G0023082.1 mouse_genomes_project 17 13197642 13201119 - Dll1 protein_coding retained_intron MGP_LPJ_T0045473.1 MGP_LPJ_G0023082.1 mouse_genomes_project 17 13200812 13205353 - Dll1 protein_coding processed_transcript MGP_LPJ_T0045932.1 MGP_LPJ_G0023245.1 mouse_genomes_project 17 24457345 24461854 + MGP_LPJ_P0045932 Ptx4 protein_coding protein_coding MGP_LPJ_T0047171.1 MGP_LPJ_G0023530.1 mouse_genomes_project 17 35592049 35594287 + MGP_LPJ_P0047171 Gpank1 protein_coding protein_coding MGP_LPJ_T0047172.1 MGP_LPJ_G0023530.1 mouse_genomes_project 17 35592050 35595393 + MGP_LPJ_P0047172 Gpank1 protein_coding protein_coding MGP_LPJ_T0047173.1 MGP_LPJ_G0023530.1 mouse_genomes_project 17 35592228 35592911 + Gpank1 protein_coding processed_transcript MGP_LPJ_T0047174.1 MGP_LPJ_G0023530.1 mouse_genomes_project 17 35593530 35595385 + MGP_LPJ_P0047174 Gpank1 protein_coding protein_coding MGP_LPJ_T0047421.1 MGP_LPJ_G0023589.1 mouse_genomes_project 17 37719830 37720552 + Trim26 protein_coding retained_intron MGP_LPJ_T0047422.1 MGP_LPJ_G0023589.1 mouse_genomes_project 17 37719837 37739350 + Trim26 protein_coding retained_intron MGP_LPJ_T0047423.1 MGP_LPJ_G0023589.1 mouse_genomes_project 17 37719837 37742699 + MGP_LPJ_P0047423 Trim26 protein_coding protein_coding MGP_LPJ_T0047424.1 MGP_LPJ_G0023589.1 mouse_genomes_project 17 37719839 37742717 + MGP_LPJ_P0047424 Trim26 protein_coding protein_coding MGP_LPJ_T0047425.1 MGP_LPJ_G0023589.1 mouse_genomes_project 17 37719842 37742699 + MGP_LPJ_P0047425 Trim26 protein_coding protein_coding MGP_LPJ_T0047426.1 MGP_LPJ_G0023589.1 mouse_genomes_project 17 37719869 37736008 + MGP_LPJ_P0047426 Trim26 protein_coding protein_coding MGP_LPJ_T0047427.1 MGP_LPJ_G0023589.1 mouse_genomes_project 17 37719880 37740946 + MGP_LPJ_P0047427 Trim26 protein_coding protein_coding MGP_LPJ_T0047428.1 MGP_LPJ_G0023589.1 mouse_genomes_project 17 37719880 37742716 + MGP_LPJ_P0047428 Trim26 protein_coding protein_coding MGP_LPJ_T0047429.1 MGP_LPJ_G0023589.1 mouse_genomes_project 17 37735820 37741258 + MGP_LPJ_P0047429 Trim26 protein_coding protein_coding MGP_LPJ_T0047430.1 MGP_LPJ_G0023589.1 mouse_genomes_project 17 37737952 37742717 + Trim26 protein_coding processed_transcript MGP_LPJ_T0047522.1 MGP_LPJ_G0023633.1 mouse_genomes_project 17 38687642 38747367 + MGP_LPJ_P0047522 Olfr121 protein_coding protein_coding MGP_LPJ_T0048515.1 MGP_LPJ_G0023984.1 mouse_genomes_project 17 87329738 87344760 - MGP_LPJ_P0048515 Cox7a2l protein_coding protein_coding MGP_LPJ_T0048516.1 MGP_LPJ_G0023984.1 mouse_genomes_project 17 87329738 87344760 - MGP_LPJ_P0048516 Cox7a2l protein_coding protein_coding MGP_LPJ_T0047502.1 MGP_LPJ_G0023616.1 mouse_genomes_project 17 38258834 38259873 - MGP_LPJ_P0047502 Olfr101 protein_coding protein_coding MGP_LPJ_T0045487.1 MGP_LPJ_G0023086.1 mouse_genomes_project 17 13360226 13368221 - MGP_LPJ_P0045487 Pdcd2 protein_coding protein_coding MGP_LPJ_T0045488.1 MGP_LPJ_G0023086.1 mouse_genomes_project 17 13362593 13368241 - MGP_LPJ_P0045488 Pdcd2 protein_coding protein_coding MGP_LPJ_T0045489.1 MGP_LPJ_G0023086.1 mouse_genomes_project 17 13362611 13363162 - Pdcd2 protein_coding retained_intron MGP_LPJ_T0045490.1 MGP_LPJ_G0023086.1 mouse_genomes_project 17 13363721 13368024 - Pdcd2 protein_coding retained_intron MGP_LPJ_T0045491.1 MGP_LPJ_G0023086.1 mouse_genomes_project 17 13363809 13367926 - Pdcd2 protein_coding retained_intron MGP_LPJ_T0048021.1 MGP_LPJ_G0023798.1 mouse_genomes_project 17 55767842 55809658 - MGP_LPJ_P0048021 Pp2d1 protein_coding protein_coding MGP_LPJ_T0006948.1 MGP_LPJ_G0005723.1 mouse_genomes_project 17 33994091 33996475 - 4931413I07Rik lincRNA lincRNA MGP_LPJ_T0010213.1 MGP_LPJ_G0008331.1 mouse_genomes_project 17 34104613 34104671 - Gm27775 miRNA miRNA MGP_LPJ_T0046336.1 MGP_LPJ_G0023342.1 mouse_genomes_project 17 27830813 27857746 + MGP_LPJ_P0046336 Def6 protein_coding protein_coding MGP_LPJ_T0046337.1 MGP_LPJ_G0023342.1 mouse_genomes_project 17 27830872 27836804 + Def6 protein_coding processed_transcript MGP_LPJ_T0101934.1 MGP_LPJ_G0039971.1 mouse_genomes_project 17 19630698 19631122 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0048481.1 MGP_LPJ_G0023965.1 mouse_genomes_project 17 83869958 83931693 + MGP_LPJ_P0048481 Galm protein_coding protein_coding MGP_LPJ_T0048482.1 MGP_LPJ_G0023965.1 mouse_genomes_project 17 83889541 83929673 + MGP_LPJ_P0048482 Galm protein_coding protein_coding MGP_LPJ_T0010242.1 MGP_LPJ_G0008360.1 mouse_genomes_project 17 82533465 82533563 - Gm26377 miRNA miRNA MGP_LPJ_T0099233.1 MGP_LPJ_G0037496.1 mouse_genomes_project 17 75771134 75771264 - Gm24736 snRNA snRNA MGP_LPJ_T0048071.1 MGP_LPJ_G0023821.1 mouse_genomes_project 17 58452950 58461709 - MGP_LPJ_P0048071 Plin4 protein_coding protein_coding MGP_LPJ_T0013269.1 MGP_LPJ_G0011360.1 mouse_genomes_project 17 82745392 82746369 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100465.1 MGP_LPJ_G0038728.1 mouse_genomes_project 17 23831159 23831237 + Snord60 snoRNA snoRNA MGP_LPJ_T0046365.1 MGP_LPJ_G0023346.1 mouse_genomes_project 17 27974943 27990453 - Tead3 protein_coding retained_intron MGP_LPJ_T0046366.1 MGP_LPJ_G0023346.1 mouse_genomes_project 17 27977355 27992313 - MGP_LPJ_P0046366 Tead3 protein_coding protein_coding MGP_LPJ_T0046367.1 MGP_LPJ_G0023346.1 mouse_genomes_project 17 27978141 27980025 - Tead3 protein_coding retained_intron MGP_LPJ_T0046368.1 MGP_LPJ_G0023346.1 mouse_genomes_project 17 27978558 27980954 - Tead3 protein_coding processed_transcript MGP_LPJ_T0045561.1 MGP_LPJ_G0023130.1 mouse_genomes_project 17 19548203 19549139 - MGP_LPJ_P0045561 Vmn1r231 protein_coding protein_coding MGP_LPJ_T0013244.1 MGP_LPJ_G0011335.1 mouse_genomes_project 17 49911984 49912178 - processed_pseudogene processed_pseudogene MGP_LPJ_T0047394.1 MGP_LPJ_G0023576.1 mouse_genomes_project 17 36627092 36731937 - MGP_LPJ_P0047394 H2-T10 protein_coding protein_coding MGP_LPJ_T0047809.1 MGP_LPJ_G0023739.1 mouse_genomes_project 17 48489360 48490499 - Gnmt protein_coding retained_intron MGP_LPJ_T0047810.1 MGP_LPJ_G0023739.1 mouse_genomes_project 17 48489360 48492831 - MGP_LPJ_P0047810 Gnmt protein_coding protein_coding MGP_LPJ_T0047935.1 MGP_LPJ_G0023775.1 mouse_genomes_project 17 50224686 50237320 + MGP_LPJ_P0047935 Trem3 protein_coding protein_coding MGP_LPJ_T0003725.1 MGP_LPJ_G0003363.1 mouse_genomes_project 17 8489676 8496906 - Gm28505 antisense antisense MGP_LPJ_T0006997.1 MGP_LPJ_G0005758.1 mouse_genomes_project 17 86874856 86876581 + Gm29052 lincRNA lincRNA MGP_LPJ_T0048069.1 MGP_LPJ_G0023820.1 mouse_genomes_project 17 58428672 58452956 + MGP_LPJ_P0048069 Hdgfrp2 protein_coding protein_coding MGP_LPJ_T0048070.1 MGP_LPJ_G0023820.1 mouse_genomes_project 17 58428770 58452813 + MGP_LPJ_P0048070 Hdgfrp2 protein_coding unknown_likely_coding MGP_LPJ_T0011436.1 MGP_LPJ_G0009554.1 mouse_genomes_project 17 15768477 15768763 + Gm23837 misc_RNA misc_RNA MGP_LPJ_T0045359.1 MGP_LPJ_G0023048.1 mouse_genomes_project 17 7572110 7693688 - MGP_LPJ_P0045359 Qk protein_coding protein_coding MGP_LPJ_T0045360.1 MGP_LPJ_G0023048.1 mouse_genomes_project 17 7575816 7693688 - MGP_LPJ_P0045360 Qk protein_coding protein_coding MGP_LPJ_T0045379.1 MGP_LPJ_G0023053.1 mouse_genomes_project 17 9841138 9883612 + MGP_LPJ_P0045379 Plg protein_coding protein_coding MGP_LPJ_T0003785.1 MGP_LPJ_G0003407.1 mouse_genomes_project 17 49564140 49566166 - Frs3os antisense antisense MGP_LPJ_T0003786.1 MGP_LPJ_G0003407.1 mouse_genomes_project 17 49564209 49564999 - Frs3os antisense antisense MGP_LPJ_T0003787.1 MGP_LPJ_G0003407.1 mouse_genomes_project 17 49564492 49566149 - Frs3os antisense antisense MGP_LPJ_T0001020.1 MGP_LPJ_G0000945.1 mouse_genomes_project 17 53990461 53992440 - TEC TEC MGP_LPJ_T0048039.1 MGP_LPJ_G0023805.1 mouse_genomes_project 17 57940765 57963107 - MGP_LPJ_P0048039 Vmn2r118 protein_coding protein_coding MGP_LPJ_T0048085.1 MGP_LPJ_G0023831.1 mouse_genomes_project 17 58644599 58656563 - MGP_LPJ_P0048085 Plin3 protein_coding protein_coding MGP_LPJ_T0047999.1 MGP_LPJ_G0023791.1 mouse_genomes_project 17 52398001 52413036 - MGP_LPJ_P0047999 Dazl protein_coding protein_coding MGP_LPJ_T0048041.1 MGP_LPJ_G0023807.1 mouse_genomes_project 17 58083720 58186576 + MGP_LPJ_P0048041 Adgre4 protein_coding protein_coding MGP_LPJ_T0047507.1 MGP_LPJ_G0023620.1 mouse_genomes_project 17 38445705 38446650 + MGP_LPJ_P0047507 Olfr109 protein_coding protein_coding MGP_LPJ_T0006916.1 MGP_LPJ_G0005698.1 mouse_genomes_project 17 15357199 15362712 - Gm26873 lincRNA lincRNA MGP_LPJ_T0046328.1 MGP_LPJ_G0023341.1 mouse_genomes_project 17 27800202 27828922 + Zfp523 protein_coding retained_intron MGP_LPJ_T0046329.1 MGP_LPJ_G0023341.1 mouse_genomes_project 17 27800334 27828922 + MGP_LPJ_P0046329 Zfp523 protein_coding protein_coding MGP_LPJ_T0046330.1 MGP_LPJ_G0023341.1 mouse_genomes_project 17 27800413 27828920 + MGP_LPJ_P0046330 Zfp523 protein_coding protein_coding MGP_LPJ_T0046331.1 MGP_LPJ_G0023341.1 mouse_genomes_project 17 27812960 27820830 + Zfp523 protein_coding processed_transcript MGP_LPJ_T0046332.1 MGP_LPJ_G0023341.1 mouse_genomes_project 17 27820814 27825514 + MGP_LPJ_P0046332 Zfp523 protein_coding protein_coding MGP_LPJ_T0046333.1 MGP_LPJ_G0023341.1 mouse_genomes_project 17 27825326 27828198 + MGP_LPJ_P0046333 Zfp523 protein_coding protein_coding MGP_LPJ_T0046334.1 MGP_LPJ_G0023341.1 mouse_genomes_project 17 27825501 27828922 + MGP_LPJ_P0046334 Zfp523 protein_coding nonsense_mediated_decay MGP_LPJ_T0046335.1 MGP_LPJ_G0023341.1 mouse_genomes_project 17 27827144 27828343 + Zfp523 protein_coding retained_intron MGP_LPJ_T0046788.1 MGP_LPJ_G0023452.1 mouse_genomes_project 17 34139894 34141974 + MGP_LPJ_P0046788 Zbtb22 protein_coding protein_coding MGP_LPJ_T0046789.1 MGP_LPJ_G0023452.1 mouse_genomes_project 17 34140161 34144156 + MGP_LPJ_P0046789 Zbtb22 protein_coding protein_coding MGP_LPJ_T0045535.1 MGP_LPJ_G0023104.1 mouse_genomes_project 17 16188296 16192624 + MGP_LPJ_P0045535 protein_coding protein_coding MGP_LPJ_T0045528.1 MGP_LPJ_G0023098.1 mouse_genomes_project 17 15914007 15914916 - MGP_LPJ_P0045528 Gm7535 protein_coding protein_coding MGP_LPJ_T0013199.1 MGP_LPJ_G0011290.1 mouse_genomes_project 17 8299589 8299809 + processed_pseudogene processed_pseudogene MGP_LPJ_T0045989.1 MGP_LPJ_G0023261.1 mouse_genomes_project 17 24727617 24793962 - MGP_LPJ_P0045989 Cacna1h protein_coding protein_coding MGP_LPJ_T0045990.1 MGP_LPJ_G0023261.1 mouse_genomes_project 17 24727618 24793831 - MGP_LPJ_P0045990 Cacna1h protein_coding unknown_likely_coding MGP_LPJ_T0045991.1 MGP_LPJ_G0023261.1 mouse_genomes_project 17 24727620 24793962 - MGP_LPJ_P0045991 Cacna1h protein_coding protein_coding MGP_LPJ_T0045992.1 MGP_LPJ_G0023261.1 mouse_genomes_project 17 24727627 24793962 - MGP_LPJ_P0045992 Cacna1h protein_coding protein_coding MGP_LPJ_T0045993.1 MGP_LPJ_G0023261.1 mouse_genomes_project 17 24730220 24733858 - MGP_LPJ_P0045993 Cacna1h protein_coding protein_coding MGP_LPJ_T0045994.1 MGP_LPJ_G0023261.1 mouse_genomes_project 17 24730532 24733486 - MGP_LPJ_P0045994 Cacna1h protein_coding nonsense_mediated_decay MGP_LPJ_T0045995.1 MGP_LPJ_G0023261.1 mouse_genomes_project 17 24730887 24732262 - Cacna1h protein_coding retained_intron MGP_LPJ_T0045996.1 MGP_LPJ_G0023261.1 mouse_genomes_project 17 24741452 24742687 - Cacna1h protein_coding retained_intron MGP_LPJ_T0045997.1 MGP_LPJ_G0023261.1 mouse_genomes_project 17 24745477 24793947 - Cacna1h protein_coding retained_intron MGP_LPJ_T0045998.1 MGP_LPJ_G0023261.1 mouse_genomes_project 17 24750855 24793457 - MGP_LPJ_P0045998 Cacna1h protein_coding protein_coding MGP_LPJ_T0045999.1 MGP_LPJ_G0023261.1 mouse_genomes_project 17 24792012 24793962 - Cacna1h protein_coding retained_intron MGP_LPJ_T0045855.1 MGP_LPJ_G0023229.1 mouse_genomes_project 17 24083549 24089218 + MGP_LPJ_P0045855 Hs3st6 protein_coding protein_coding MGP_LPJ_T0047820.1 MGP_LPJ_G0023745.1 mouse_genomes_project 17 48667897 48669087 - MGP_LPJ_P0047820 A330017A19Rik protein_coding protein_coding MGP_LPJ_T0045921.1 MGP_LPJ_G0023244.1 mouse_genomes_project 17 24435127 24452745 - Telo2 protein_coding retained_intron MGP_LPJ_T0045922.1 MGP_LPJ_G0023244.1 mouse_genomes_project 17 24435127 24452805 - MGP_LPJ_P0045922 Telo2 protein_coding protein_coding MGP_LPJ_T0045923.1 MGP_LPJ_G0023244.1 mouse_genomes_project 17 24435134 24452743 - MGP_LPJ_P0045923 Telo2 protein_coding protein_coding MGP_LPJ_T0045924.1 MGP_LPJ_G0023244.1 mouse_genomes_project 17 24435174 24439209 - Telo2 protein_coding processed_transcript MGP_LPJ_T0045925.1 MGP_LPJ_G0023244.1 mouse_genomes_project 17 24435182 24442553 - Telo2 protein_coding processed_transcript MGP_LPJ_T0045926.1 MGP_LPJ_G0023244.1 mouse_genomes_project 17 24435381 24436993 - Telo2 protein_coding processed_transcript MGP_LPJ_T0045927.1 MGP_LPJ_G0023244.1 mouse_genomes_project 17 24436323 24443849 - Telo2 protein_coding retained_intron MGP_LPJ_T0045928.1 MGP_LPJ_G0023244.1 mouse_genomes_project 17 24447665 24452030 - Telo2 protein_coding processed_transcript MGP_LPJ_T0045929.1 MGP_LPJ_G0023244.1 mouse_genomes_project 17 24447962 24450489 - Telo2 protein_coding processed_transcript MGP_LPJ_T0045930.1 MGP_LPJ_G0023244.1 mouse_genomes_project 17 24450042 24452150 - Telo2 protein_coding processed_transcript MGP_LPJ_T0045931.1 MGP_LPJ_G0023244.1 mouse_genomes_project 17 24450977 24452792 - Telo2 protein_coding retained_intron MGP_LPJ_T0010209.1 MGP_LPJ_G0008327.1 mouse_genomes_project 17 28237109 28237170 - Mir6969 miRNA miRNA MGP_LPJ_T0046986.1 MGP_LPJ_G0023492.1 mouse_genomes_project 17 34963237 34965209 - Egfl8 protein_coding retained_intron MGP_LPJ_T0046987.1 MGP_LPJ_G0023492.1 mouse_genomes_project 17 34963238 34965860 - MGP_LPJ_P0046987 Egfl8 protein_coding protein_coding MGP_LPJ_T0046988.1 MGP_LPJ_G0023492.1 mouse_genomes_project 17 34963242 34965860 - MGP_LPJ_P0046988 Egfl8 protein_coding protein_coding MGP_LPJ_T0046989.1 MGP_LPJ_G0023492.1 mouse_genomes_project 17 34963665 34965677 - MGP_LPJ_P0046989 Egfl8 protein_coding protein_coding MGP_LPJ_T0046990.1 MGP_LPJ_G0023492.1 mouse_genomes_project 17 34964052 34965845 - Egfl8 protein_coding retained_intron MGP_LPJ_T0046991.1 MGP_LPJ_G0023492.1 mouse_genomes_project 17 34964657 34965210 - Egfl8 protein_coding retained_intron MGP_LPJ_T0047728.1 MGP_LPJ_G0023715.1 mouse_genomes_project 17 47920246 47966437 + MGP_LPJ_P0047728 Xpo5 protein_coding protein_coding MGP_LPJ_T0046855.1 MGP_LPJ_G0023464.1 mouse_genomes_project 17 34284142 34290724 + MGP_LPJ_P0046855 Rxrb protein_coding protein_coding MGP_LPJ_T0046856.1 MGP_LPJ_G0023464.1 mouse_genomes_project 17 34284513 34290031 + MGP_LPJ_P0046856 Rxrb protein_coding protein_coding MGP_LPJ_T0046857.1 MGP_LPJ_G0023464.1 mouse_genomes_project 17 34284526 34286533 + MGP_LPJ_P0046857 Rxrb protein_coding protein_coding MGP_LPJ_T0046858.1 MGP_LPJ_G0023464.1 mouse_genomes_project 17 34284705 34290146 + MGP_LPJ_P0046858 Rxrb protein_coding protein_coding MGP_LPJ_T0046859.1 MGP_LPJ_G0023464.1 mouse_genomes_project 17 34284731 34290724 + MGP_LPJ_P0046859 Rxrb protein_coding protein_coding MGP_LPJ_T0046860.1 MGP_LPJ_G0023464.1 mouse_genomes_project 17 34285882 34288341 + Rxrb protein_coding retained_intron MGP_LPJ_T0046861.1 MGP_LPJ_G0023464.1 mouse_genomes_project 17 34286238 34288704 + Rxrb protein_coding retained_intron MGP_LPJ_T0046862.1 MGP_LPJ_G0023464.1 mouse_genomes_project 17 34288653 34289605 + Rxrb protein_coding retained_intron MGP_LPJ_T0046863.1 MGP_LPJ_G0023464.1 mouse_genomes_project 17 34288697 34289638 + Rxrb protein_coding retained_intron MGP_LPJ_T0046864.1 MGP_LPJ_G0023464.1 mouse_genomes_project 17 34288793 34289865 + Rxrb protein_coding retained_intron MGP_LPJ_T0006949.1 MGP_LPJ_G0005724.1 mouse_genomes_project 17 34128486 34130456 + Platr17 lincRNA lincRNA MGP_LPJ_T0099210.1 MGP_LPJ_G0037473.1 mouse_genomes_project 17 23649205 23649312 - Gm25618 snRNA snRNA MGP_LPJ_T0045298.1 MGP_LPJ_G0023026.1 mouse_genomes_project 17 4877125 4881456 + MGP_LPJ_P0045298 Ttll2 protein_coding protein_coding MGP_LPJ_T0013210.1 MGP_LPJ_G0011301.1 mouse_genomes_project 17 21842742 21843160 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013193.1 MGP_LPJ_G0011284.1 mouse_genomes_project 17 119912 120322 + processed_pseudogene processed_pseudogene MGP_LPJ_T0045956.1 MGP_LPJ_G0023253.1 mouse_genomes_project 17 24586096 24587473 - Baiap3 protein_coding retained_intron MGP_LPJ_T0045957.1 MGP_LPJ_G0023253.1 mouse_genomes_project 17 24586096 24599776 - MGP_LPJ_P0045957 Baiap3 protein_coding protein_coding MGP_LPJ_T0045958.1 MGP_LPJ_G0023253.1 mouse_genomes_project 17 24586794 24597361 - MGP_LPJ_P0045958 Baiap3 protein_coding protein_coding MGP_LPJ_T0045959.1 MGP_LPJ_G0023253.1 mouse_genomes_project 17 24586809 24587751 - MGP_LPJ_P0045959 Baiap3 protein_coding protein_coding MGP_LPJ_T0045960.1 MGP_LPJ_G0023253.1 mouse_genomes_project 17 24586818 24599693 - MGP_LPJ_P0045960 Baiap3 protein_coding protein_coding MGP_LPJ_T0045961.1 MGP_LPJ_G0023253.1 mouse_genomes_project 17 24586961 24599693 - MGP_LPJ_P0045961 Baiap3 protein_coding protein_coding MGP_LPJ_T0045962.1 MGP_LPJ_G0023253.1 mouse_genomes_project 17 24588230 24589222 - Baiap3 protein_coding retained_intron MGP_LPJ_T0045963.1 MGP_LPJ_G0023253.1 mouse_genomes_project 17 24589451 24591549 - Baiap3 protein_coding retained_intron MGP_LPJ_T0045964.1 MGP_LPJ_G0023253.1 mouse_genomes_project 17 24594434 24599686 - Baiap3 protein_coding retained_intron MGP_LPJ_T0048558.1 MGP_LPJ_G0024001.1 mouse_genomes_project 17 90039144 90209024 - MGP_LPJ_P0048558 Srbd1 protein_coding protein_coding MGP_LPJ_T0046140.1 MGP_LPJ_G0023294.1 mouse_genomes_project 17 25496371 25508191 - MGP_LPJ_P0046140 Decr2 protein_coding protein_coding MGP_LPJ_T0046141.1 MGP_LPJ_G0023294.1 mouse_genomes_project 17 25500427 25501460 - Decr2 protein_coding processed_transcript MGP_LPJ_T0046142.1 MGP_LPJ_G0023294.1 mouse_genomes_project 17 25501176 25508191 - Decr2 protein_coding retained_intron MGP_LPJ_T0046143.1 MGP_LPJ_G0023294.1 mouse_genomes_project 17 25501633 25508181 - Decr2 protein_coding processed_transcript MGP_LPJ_T0046144.1 MGP_LPJ_G0023294.1 mouse_genomes_project 17 25505315 25508220 - Decr2 protein_coding processed_transcript MGP_LPJ_T0048564.1 MGP_LPJ_G0024003.1 mouse_genomes_project 17 90593399 90600944 - MGP_LPJ_P0048564 Gm10309 protein_coding protein_coding MGP_LPJ_T0047086.1 MGP_LPJ_G0023511.1 mouse_genomes_project 17 35424689 35425187 + MGP_LPJ_P0047086 Gm20481 protein_coding protein_coding MGP_LPJ_T0001025.1 MGP_LPJ_G0000950.1 mouse_genomes_project 17 54061324 54065401 + TEC TEC MGP_LPJ_T0006954.1 MGP_LPJ_G0005729.1 mouse_genomes_project 17 34994615 34997747 - Gm20461 lincRNA lincRNA MGP_LPJ_T0013194.1 MGP_LPJ_G0011285.1 mouse_genomes_project 17 3098204 3098688 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100461.1 MGP_LPJ_G0038724.1 mouse_genomes_project 17 9754471 9754611 + Gm24794 snoRNA snoRNA MGP_LPJ_T0001015.1 MGP_LPJ_G0000940.1 mouse_genomes_project 17 31533351 31537881 - TEC TEC MGP_LPJ_T0010227.1 MGP_LPJ_G0008345.1 mouse_genomes_project 17 40724637 40724747 - Gm26376 miRNA miRNA MGP_LPJ_T0010202.1 MGP_LPJ_G0008320.1 mouse_genomes_project 17 26422444 26422508 - Mir3083 miRNA miRNA MGP_LPJ_T0101504.1 MGP_LPJ_G0039639.1 mouse_genomes_project 17 35761873 35762929 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0101505.1 MGP_LPJ_G0039639.1 mouse_genomes_project 17 35762256 35763112 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0045709.1 MGP_LPJ_G0023194.1 mouse_genomes_project 17 23312902 23339724 - MGP_LPJ_P0045709 Kctd5 protein_coding protein_coding MGP_LPJ_T0045710.1 MGP_LPJ_G0023194.1 mouse_genomes_project 17 23322275 23334528 - Kctd5 protein_coding processed_transcript MGP_LPJ_T0045466.1 MGP_LPJ_G0023081.1 mouse_genomes_project 17 12781640 12879647 + MGP_LPJ_P0045466 Ermard protein_coding protein_coding MGP_LPJ_T0045467.1 MGP_LPJ_G0023081.1 mouse_genomes_project 17 12870576 12879643 + MGP_LPJ_P0045467 Ermard protein_coding protein_coding MGP_LPJ_T0048042.1 MGP_LPJ_G0023808.1 mouse_genomes_project 17 58197383 58290326 - MGP_LPJ_P0048042 Zfp119a protein_coding protein_coding MGP_LPJ_T0045378.1 MGP_LPJ_G0023052.1 mouse_genomes_project 17 9684595 9772102 - MGP_LPJ_P0045378 Map3k4 protein_coding protein_coding MGP_LPJ_T0099209.1 MGP_LPJ_G0037472.1 mouse_genomes_project 17 13687330 13687437 - Gm25598 snRNA snRNA MGP_LPJ_T0048077.1 MGP_LPJ_G0023825.1 mouse_genomes_project 17 58516150 58527872 + MGP_LPJ_P0048077 Tnfaip8l1 protein_coding protein_coding MGP_LPJ_T0045273.1 MGP_LPJ_G0023014.1 mouse_genomes_project 17 3412568 3445987 + protein_coding processed_transcript MGP_LPJ_T0045274.1 MGP_LPJ_G0023014.1 mouse_genomes_project 17 3412610 3519415 + MGP_LPJ_P0045274 protein_coding protein_coding MGP_LPJ_T0045275.1 MGP_LPJ_G0023014.1 mouse_genomes_project 17 3424164 3430280 + protein_coding processed_transcript MGP_LPJ_T0045276.1 MGP_LPJ_G0023014.1 mouse_genomes_project 17 3428844 3431852 + protein_coding processed_transcript MGP_LPJ_T0045277.1 MGP_LPJ_G0023014.1 mouse_genomes_project 17 3444405 3445984 + protein_coding processed_transcript MGP_LPJ_T0045278.1 MGP_LPJ_G0023014.1 mouse_genomes_project 17 3445342 3538549 + protein_coding retained_intron MGP_LPJ_T0045552.1 MGP_LPJ_G0023121.1 mouse_genomes_project 17 19148827 19149724 + MGP_LPJ_P0045552 Vmn1r225 protein_coding protein_coding MGP_LPJ_T0046764.1 MGP_LPJ_G0023448.1 mouse_genomes_project 17 34037658 34053722 + MGP_LPJ_P0046764 Ndufa7 protein_coding protein_coding MGP_LPJ_T0046765.1 MGP_LPJ_G0023448.1 mouse_genomes_project 17 34037661 34040503 + Ndufa7 protein_coding retained_intron MGP_LPJ_T0046766.1 MGP_LPJ_G0023448.1 mouse_genomes_project 17 34037671 34053715 + MGP_LPJ_P0046766 Ndufa7 protein_coding nonsense_mediated_decay MGP_LPJ_T0046767.1 MGP_LPJ_G0023448.1 mouse_genomes_project 17 34037712 34040226 + Ndufa7 protein_coding retained_intron MGP_LPJ_T0046768.1 MGP_LPJ_G0023448.1 mouse_genomes_project 17 34039424 34053588 + Ndufa7 protein_coding processed_transcript MGP_LPJ_T0046769.1 MGP_LPJ_G0023448.1 mouse_genomes_project 17 34040000 34053592 + Ndufa7 protein_coding processed_transcript MGP_LPJ_T0046770.1 MGP_LPJ_G0023448.1 mouse_genomes_project 17 34043503 34053715 + Ndufa7 protein_coding processed_transcript MGP_LPJ_T0046771.1 MGP_LPJ_G0023448.1 mouse_genomes_project 17 34043738 34053700 + Ndufa7 protein_coding processed_transcript MGP_LPJ_T0046772.1 MGP_LPJ_G0023448.1 mouse_genomes_project 17 34043772 34053720 + Ndufa7 protein_coding retained_intron MGP_LPJ_T0100486.1 MGP_LPJ_G0038749.1 mouse_genomes_project 17 77359265 77359408 + Gm24475 snoRNA snoRNA MGP_LPJ_T0048424.1 MGP_LPJ_G0023942.1 mouse_genomes_project 17 78454436 78870208 + MGP_LPJ_P0048424 Ltbp1 protein_coding protein_coding MGP_LPJ_T0048425.1 MGP_LPJ_G0023942.1 mouse_genomes_project 17 78646426 78825706 + MGP_LPJ_P0048425 Ltbp1 protein_coding protein_coding MGP_LPJ_T0048426.1 MGP_LPJ_G0023942.1 mouse_genomes_project 17 78646426 78869778 + MGP_LPJ_P0048426 Ltbp1 protein_coding protein_coding MGP_LPJ_T0048427.1 MGP_LPJ_G0023942.1 mouse_genomes_project 17 78646527 78869767 + MGP_LPJ_P0048427 Ltbp1 protein_coding protein_coding MGP_LPJ_T0048428.1 MGP_LPJ_G0023942.1 mouse_genomes_project 17 78765941 78770335 + Ltbp1 protein_coding retained_intron MGP_LPJ_T0048429.1 MGP_LPJ_G0023942.1 mouse_genomes_project 17 78862657 78870953 + Ltbp1 protein_coding retained_intron MGP_LPJ_T0001029.1 MGP_LPJ_G0000954.1 mouse_genomes_project 17 83532536 83550543 - TEC TEC MGP_LPJ_T0045776.1 MGP_LPJ_G0023207.1 mouse_genomes_project 17 23742936 23754491 - MGP_LPJ_P0045776 E4f1 protein_coding unknown_likely_coding MGP_LPJ_T0045777.1 MGP_LPJ_G0023207.1 mouse_genomes_project 17 23742956 23754526 - MGP_LPJ_P0045777 E4f1 protein_coding protein_coding MGP_LPJ_T0013261.1 MGP_LPJ_G0011352.1 mouse_genomes_project 17 75966765 75967706 - processed_pseudogene processed_pseudogene MGP_LPJ_T0045940.1 MGP_LPJ_G0023247.1 mouse_genomes_project 17 24498292 24507739 + MGP_LPJ_P0045940 Ccdc154 protein_coding nonsense_mediated_decay MGP_LPJ_T0045941.1 MGP_LPJ_G0023247.1 mouse_genomes_project 17 24498292 24507739 + MGP_LPJ_P0045941 Ccdc154 protein_coding protein_coding MGP_LPJ_T0045942.1 MGP_LPJ_G0023247.1 mouse_genomes_project 17 24498295 24507737 + MGP_LPJ_P0045942 Ccdc154 protein_coding protein_coding MGP_LPJ_T0045943.1 MGP_LPJ_G0023247.1 mouse_genomes_project 17 24498673 24507708 + MGP_LPJ_P0045943 Ccdc154 protein_coding protein_coding MGP_LPJ_T0011454.1 MGP_LPJ_G0009572.1 mouse_genomes_project 17 89629059 89629133 + Gm27610 misc_RNA misc_RNA MGP_LPJ_T0046003.1 MGP_LPJ_G0023264.1 mouse_genomes_project 17 24938398 24943175 - MGP_LPJ_P0046003 Sox8 protein_coding protein_coding MGP_LPJ_T0046004.1 MGP_LPJ_G0023264.1 mouse_genomes_project 17 24940492 24942703 - MGP_LPJ_P0046004 Sox8 protein_coding protein_coding MGP_LPJ_T0046005.1 MGP_LPJ_G0023264.1 mouse_genomes_project 17 24941198 24943175 - MGP_LPJ_P0046005 Sox8 protein_coding protein_coding MGP_LPJ_T0099226.1 MGP_LPJ_G0037489.1 mouse_genomes_project 17 51376831 51376992 + Gm22978 snRNA snRNA MGP_LPJ_T0047573.1 MGP_LPJ_G0023674.1 mouse_genomes_project 17 42388230 42418881 + MGP_LPJ_P0047573 Mut protein_coding protein_coding MGP_LPJ_T0046684.1 MGP_LPJ_G0023428.1 mouse_genomes_project 17 33173691 33177607 - MGP_LPJ_P0046684 4921501E09Rik protein_coding protein_coding MGP_LPJ_T0046826.1 MGP_LPJ_G0023458.1 mouse_genomes_project 17 34180425 34190685 + MGP_LPJ_P0046826 Vps52 protein_coding protein_coding MGP_LPJ_T0046827.1 MGP_LPJ_G0023458.1 mouse_genomes_project 17 34180528 34189916 + MGP_LPJ_P0046827 Vps52 protein_coding protein_coding MGP_LPJ_T0046828.1 MGP_LPJ_G0023458.1 mouse_genomes_project 17 34182670 34185089 + Vps52 protein_coding retained_intron MGP_LPJ_T0046829.1 MGP_LPJ_G0023458.1 mouse_genomes_project 17 34183622 34185118 + Vps52 protein_coding retained_intron MGP_LPJ_T0046830.1 MGP_LPJ_G0023458.1 mouse_genomes_project 17 34185724 34187435 + Vps52 protein_coding retained_intron MGP_LPJ_T0046831.1 MGP_LPJ_G0023458.1 mouse_genomes_project 17 34187002 34189970 + Vps52 protein_coding retained_intron MGP_LPJ_T0046456.1 MGP_LPJ_G0023366.1 mouse_genomes_project 17 28918465 29004112 - MGP_LPJ_P0046456 Cpne5 protein_coding protein_coding MGP_LPJ_T0046457.1 MGP_LPJ_G0023366.1 mouse_genomes_project 17 28919831 28945906 - Cpne5 protein_coding processed_transcript MGP_LPJ_T0046458.1 MGP_LPJ_G0023366.1 mouse_genomes_project 17 28931363 28938463 - Cpne5 protein_coding processed_transcript MGP_LPJ_T0046459.1 MGP_LPJ_G0023366.1 mouse_genomes_project 17 28950133 29004074 - MGP_LPJ_P0046459 Cpne5 protein_coding protein_coding MGP_LPJ_T0046460.1 MGP_LPJ_G0023366.1 mouse_genomes_project 17 28981747 29004027 - Cpne5 protein_coding retained_intron MGP_LPJ_T0047085.1 MGP_LPJ_G0023510.1 mouse_genomes_project 17 35420213 35427511 - MGP_LPJ_P0047085 Hspa1b protein_coding protein_coding MGP_LPJ_T0048193.1 MGP_LPJ_G0023874.1 mouse_genomes_project 17 60164627 60165080 - MGP_LPJ_P0048193 Gm21834 protein_coding protein_coding MGP_LPJ_T0048086.1 MGP_LPJ_G0023832.1 mouse_genomes_project 17 58660166 58666337 - MGP_LPJ_P0048086 Arrdc5 protein_coding protein_coding MGP_LPJ_T0099219.1 MGP_LPJ_G0037482.1 mouse_genomes_project 17 36266084 36266191 - Gm23864 snRNA snRNA MGP_LPJ_T0047159.1 MGP_LPJ_G0023528.1 mouse_genomes_project 17 35583083 35584564 - MGP_LPJ_P0047159 Ly6g5b protein_coding protein_coding MGP_LPJ_T0047160.1 MGP_LPJ_G0023528.1 mouse_genomes_project 17 35583117 35584564 - MGP_LPJ_P0047160 Ly6g5b protein_coding protein_coding MGP_LPJ_T0101984.1 MGP_LPJ_G0040021.1 mouse_genomes_project 17 38345059 38346511 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0048274.1 MGP_LPJ_G0023901.1 mouse_genomes_project 17 70706634 70840589 + MGP_LPJ_P0048274 Lama1 protein_coding protein_coding MGP_LPJ_T0003799.1 MGP_LPJ_G0003417.1 mouse_genomes_project 17 74920168 74921137 - Gm15641 antisense antisense MGP_LPJ_T0001024.1 MGP_LPJ_G0000949.1 mouse_genomes_project 17 54051297 54054691 + TEC TEC MGP_LPJ_T0046836.1 MGP_LPJ_G0023460.1 mouse_genomes_project 17 34238235 36688205 - protein_coding processed_transcript MGP_LPJ_T0099244.1 MGP_LPJ_G0037507.1 mouse_genomes_project 17 97681913 97682020 - Gm25935 snRNA snRNA MGP_LPJ_T0045757.1 MGP_LPJ_G0023203.1 mouse_genomes_project 17 23638772 23686299 + Abca3 protein_coding retained_intron MGP_LPJ_T0045758.1 MGP_LPJ_G0023203.1 mouse_genomes_project 17 23638845 23698557 + MGP_LPJ_P0045758 Abca3 protein_coding protein_coding MGP_LPJ_T0045759.1 MGP_LPJ_G0023203.1 mouse_genomes_project 17 23638868 23698557 + MGP_LPJ_P0045759 Abca3 protein_coding protein_coding MGP_LPJ_T0045760.1 MGP_LPJ_G0023203.1 mouse_genomes_project 17 23638913 23689479 + Abca3 protein_coding retained_intron MGP_LPJ_T0045761.1 MGP_LPJ_G0023203.1 mouse_genomes_project 17 23638913 23664320 + Abca3 protein_coding retained_intron MGP_LPJ_T0045762.1 MGP_LPJ_G0023203.1 mouse_genomes_project 17 23638925 23647745 + Abca3 protein_coding processed_transcript MGP_LPJ_T0045763.1 MGP_LPJ_G0023203.1 mouse_genomes_project 17 23638930 23670101 + Abca3 protein_coding retained_intron MGP_LPJ_T0045764.1 MGP_LPJ_G0023203.1 mouse_genomes_project 17 23651263 23698557 + MGP_LPJ_P0045764 Abca3 protein_coding protein_coding MGP_LPJ_T0047771.1 MGP_LPJ_G0023725.1 mouse_genomes_project 17 48181194 48181716 - MGP_LPJ_P0047771 Gm5093 protein_coding protein_coding MGP_LPJ_T0045665.1 MGP_LPJ_G0023175.1 mouse_genomes_project 17 22904329 22908489 - MGP_LPJ_P0045665 Paqr4 protein_coding protein_coding MGP_LPJ_T0101917.1 MGP_LPJ_G0039954.1 mouse_genomes_project 17 16053919 16698940 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0017516.1 MGP_LPJ_G0015267.1 mouse_genomes_project 17 35403319 35404326 - 1110038B12Rik processed_transcript retained_intron MGP_LPJ_T0017517.1 MGP_LPJ_G0015267.1 mouse_genomes_project 17 35403322 35405538 - 1110038B12Rik processed_transcript retained_intron MGP_LPJ_T0017518.1 MGP_LPJ_G0015267.1 mouse_genomes_project 17 35403322 35405553 - 1110038B12Rik processed_transcript lincRNA MGP_LPJ_T0017519.1 MGP_LPJ_G0015267.1 mouse_genomes_project 17 35403322 35405530 - 1110038B12Rik processed_transcript lincRNA MGP_LPJ_T0017520.1 MGP_LPJ_G0015267.1 mouse_genomes_project 17 35403323 35405516 - 1110038B12Rik processed_transcript retained_intron MGP_LPJ_T0017521.1 MGP_LPJ_G0015267.1 mouse_genomes_project 17 35403324 35405550 - 1110038B12Rik processed_transcript lincRNA MGP_LPJ_T0017522.1 MGP_LPJ_G0015267.1 mouse_genomes_project 17 35404527 35405550 - 1110038B12Rik processed_transcript retained_intron MGP_LPJ_T0017523.1 MGP_LPJ_G0015267.1 mouse_genomes_project 17 35404675 35405544 - 1110038B12Rik processed_transcript retained_intron MGP_LPJ_T0003772.1 MGP_LPJ_G0003397.1 mouse_genomes_project 17 36589328 36627120 + A930015D03Rik antisense antisense MGP_LPJ_T0048271.1 MGP_LPJ_G0023899.1 mouse_genomes_project 17 69604092 70335363 - MGP_LPJ_P0048271 Ptprm protein_coding protein_coding MGP_LPJ_T0048272.1 MGP_LPJ_G0023899.1 mouse_genomes_project 17 69719826 70334933 - MGP_LPJ_P0048272 Ptprm protein_coding unknown_likely_coding MGP_LPJ_T0010229.1 MGP_LPJ_G0008347.1 mouse_genomes_project 17 48301111 48301174 - Mir6976 miRNA miRNA MGP_LPJ_T0099205.1 MGP_LPJ_G0037468.1 mouse_genomes_project 17 4855231 4855396 + Gm23050 snRNA snRNA MGP_LPJ_T0007008.1 MGP_LPJ_G0005766.1 mouse_genomes_project 17 99223004 99224638 - lincRNA lincRNA MGP_LPJ_T0007009.1 MGP_LPJ_G0005766.1 mouse_genomes_project 17 99224310 99227602 - lincRNA lincRNA MGP_LPJ_T0045733.1 MGP_LPJ_G0023199.1 mouse_genomes_project 17 23447382 23478495 - MGP_LPJ_P0045733 Tbc1d24 protein_coding protein_coding MGP_LPJ_T0045734.1 MGP_LPJ_G0023199.1 mouse_genomes_project 17 23447383 23478522 - MGP_LPJ_P0045734 Tbc1d24 protein_coding protein_coding MGP_LPJ_T0045735.1 MGP_LPJ_G0023199.1 mouse_genomes_project 17 23449100 23478475 - MGP_LPJ_P0045735 Tbc1d24 protein_coding protein_coding MGP_LPJ_T0045736.1 MGP_LPJ_G0023199.1 mouse_genomes_project 17 23451032 23478479 - MGP_LPJ_P0045736 Tbc1d24 protein_coding protein_coding MGP_LPJ_T0045737.1 MGP_LPJ_G0023199.1 mouse_genomes_project 17 23451205 23478474 - MGP_LPJ_P0045737 Tbc1d24 protein_coding protein_coding MGP_LPJ_T0045738.1 MGP_LPJ_G0023199.1 mouse_genomes_project 17 23451251 23478491 - MGP_LPJ_P0045738 Tbc1d24 protein_coding protein_coding MGP_LPJ_T0045739.1 MGP_LPJ_G0023199.1 mouse_genomes_project 17 23451262 23472902 - MGP_LPJ_P0045739 Tbc1d24 protein_coding protein_coding MGP_LPJ_T0045740.1 MGP_LPJ_G0023199.1 mouse_genomes_project 17 23451312 23478456 - MGP_LPJ_P0045740 Tbc1d24 protein_coding protein_coding MGP_LPJ_T0045741.1 MGP_LPJ_G0023199.1 mouse_genomes_project 17 23451312 23478483 - MGP_LPJ_P0045741 Tbc1d24 protein_coding protein_coding MGP_LPJ_T0045742.1 MGP_LPJ_G0023199.1 mouse_genomes_project 17 23451331 23478474 - MGP_LPJ_P0045742 Tbc1d24 protein_coding protein_coding MGP_LPJ_T0045743.1 MGP_LPJ_G0023199.1 mouse_genomes_project 17 23451332 23472902 - MGP_LPJ_P0045743 Tbc1d24 protein_coding protein_coding MGP_LPJ_T0045744.1 MGP_LPJ_G0023199.1 mouse_genomes_project 17 23451478 23478485 - MGP_LPJ_P0045744 Tbc1d24 protein_coding nonsense_mediated_decay MGP_LPJ_T0045745.1 MGP_LPJ_G0023199.1 mouse_genomes_project 17 23452682 23453506 - Tbc1d24 protein_coding processed_transcript MGP_LPJ_T0045746.1 MGP_LPJ_G0023199.1 mouse_genomes_project 17 23453880 23478442 - MGP_LPJ_P0045746 Tbc1d24 protein_coding protein_coding MGP_LPJ_T0045747.1 MGP_LPJ_G0023199.1 mouse_genomes_project 17 23462564 23478479 - Tbc1d24 protein_coding processed_transcript MGP_LPJ_T0045748.1 MGP_LPJ_G0023199.1 mouse_genomes_project 17 23476807 23482350 - MGP_LPJ_P0045748 Tbc1d24 protein_coding protein_coding MGP_LPJ_T0045357.1 MGP_LPJ_G0023046.1 mouse_genomes_project 17 6774449 6775054 - MGP_LPJ_P0045357 Gm7879 protein_coding protein_coding MGP_LPJ_T0048329.1 MGP_LPJ_G0023913.1 mouse_genomes_project 17 74200933 74311539 + MGP_LPJ_P0048329 Myom1 protein_coding protein_coding MGP_LPJ_T0048330.1 MGP_LPJ_G0023913.1 mouse_genomes_project 17 74200980 74311540 + MGP_LPJ_P0048330 Myom1 protein_coding protein_coding MGP_LPJ_T0048331.1 MGP_LPJ_G0023913.1 mouse_genomes_project 17 74200980 74311540 + MGP_LPJ_P0048331 Myom1 protein_coding protein_coding MGP_LPJ_T0048423.1 MGP_LPJ_G0023941.1 mouse_genomes_project 17 78164145 78318140 + MGP_LPJ_P0048423 Ttc27 protein_coding protein_coding MGP_LPJ_T0006938.1 MGP_LPJ_G0005717.1 mouse_genomes_project 17 28872756 28894216 + Gm16194 lincRNA lincRNA MGP_LPJ_T0006939.1 MGP_LPJ_G0005717.1 mouse_genomes_project 17 28872781 28894222 + Gm16194 lincRNA lincRNA MGP_LPJ_T0006940.1 MGP_LPJ_G0005717.1 mouse_genomes_project 17 28872792 28879369 + Gm16194 lincRNA lincRNA MGP_LPJ_T0006941.1 MGP_LPJ_G0005717.1 mouse_genomes_project 17 28872810 28894334 + Gm16194 lincRNA lincRNA MGP_LPJ_T0045284.1 MGP_LPJ_G0023019.1 mouse_genomes_project 17 4047400 4058779 + MGP_LPJ_P0045284 protein_coding unknown_likely_coding MGP_LPJ_T0045354.1 MGP_LPJ_G0023045.1 mouse_genomes_project 17 6316289 6337160 + MGP_LPJ_P0045354 1700010I14Rik protein_coding protein_coding MGP_LPJ_T0045355.1 MGP_LPJ_G0023045.1 mouse_genomes_project 17 6316313 6337159 + MGP_LPJ_P0045355 1700010I14Rik protein_coding protein_coding MGP_LPJ_T0045356.1 MGP_LPJ_G0023045.1 mouse_genomes_project 17 6316339 6334091 + 1700010I14Rik protein_coding processed_transcript MGP_LPJ_T0010224.1 MGP_LPJ_G0008342.1 mouse_genomes_project 17 36443749 36443845 - Gm28033 miRNA miRNA MGP_LPJ_T0046978.1 MGP_LPJ_G0023491.1 mouse_genomes_project 17 34954079 34961547 + MGP_LPJ_P0046978 Agpat1 protein_coding protein_coding MGP_LPJ_T0046979.1 MGP_LPJ_G0023491.1 mouse_genomes_project 17 34954661 34961246 + MGP_LPJ_P0046979 Agpat1 protein_coding protein_coding MGP_LPJ_T0046980.1 MGP_LPJ_G0023491.1 mouse_genomes_project 17 34955710 34963338 + MGP_LPJ_P0046980 Agpat1 protein_coding protein_coding MGP_LPJ_T0046981.1 MGP_LPJ_G0023491.1 mouse_genomes_project 17 34955710 34962293 + MGP_LPJ_P0046981 Agpat1 protein_coding nonsense_mediated_decay MGP_LPJ_T0046982.1 MGP_LPJ_G0023491.1 mouse_genomes_project 17 34955822 34962741 + MGP_LPJ_P0046982 Agpat1 protein_coding nonsense_mediated_decay MGP_LPJ_T0046983.1 MGP_LPJ_G0023491.1 mouse_genomes_project 17 34958863 34963337 + MGP_LPJ_P0046983 Agpat1 protein_coding protein_coding MGP_LPJ_T0046984.1 MGP_LPJ_G0023491.1 mouse_genomes_project 17 34959454 34963307 + MGP_LPJ_P0046984 Agpat1 protein_coding protein_coding MGP_LPJ_T0046985.1 MGP_LPJ_G0023491.1 mouse_genomes_project 17 34960109 34961027 + Agpat1 protein_coding retained_intron MGP_LPJ_T0048255.1 MGP_LPJ_G0023896.1 mouse_genomes_project 17 69253200 69375326 - MGP_LPJ_P0048255 Mtcl1 protein_coding protein_coding MGP_LPJ_T0048256.1 MGP_LPJ_G0023896.1 mouse_genomes_project 17 69253204 69375326 - MGP_LPJ_P0048256 Mtcl1 protein_coding protein_coding MGP_LPJ_T0048257.1 MGP_LPJ_G0023896.1 mouse_genomes_project 17 69253206 69305359 - MGP_LPJ_P0048257 Mtcl1 protein_coding protein_coding MGP_LPJ_T0048258.1 MGP_LPJ_G0023896.1 mouse_genomes_project 17 69253896 69364697 - MGP_LPJ_P0048258 Mtcl1 protein_coding protein_coding MGP_LPJ_T0048259.1 MGP_LPJ_G0023896.1 mouse_genomes_project 17 69260144 69262755 - Mtcl1 protein_coding retained_intron MGP_LPJ_T0048260.1 MGP_LPJ_G0023896.1 mouse_genomes_project 17 69264175 69298414 - Mtcl1 protein_coding retained_intron MGP_LPJ_T0048261.1 MGP_LPJ_G0023896.1 mouse_genomes_project 17 69270400 69280609 - Mtcl1 protein_coding processed_transcript MGP_LPJ_T0048262.1 MGP_LPJ_G0023896.1 mouse_genomes_project 17 69270565 69297927 - Mtcl1 protein_coding processed_transcript MGP_LPJ_T0048263.1 MGP_LPJ_G0023896.1 mouse_genomes_project 17 69274223 69297541 - Mtcl1 protein_coding retained_intron MGP_LPJ_T0048264.1 MGP_LPJ_G0023896.1 mouse_genomes_project 17 69284170 69294153 - Mtcl1 protein_coding processed_transcript MGP_LPJ_T0048265.1 MGP_LPJ_G0023896.1 mouse_genomes_project 17 69305195 69373945 - Mtcl1 protein_coding retained_intron MGP_LPJ_T0048178.1 MGP_LPJ_G0023868.1 mouse_genomes_project 17 59655619 59680444 - MGP_LPJ_P0048178 C3 protein_coding protein_coding MGP_LPJ_T0048179.1 MGP_LPJ_G0023868.1 mouse_genomes_project 17 59655656 59675139 - MGP_LPJ_P0048179 C3 protein_coding protein_coding MGP_LPJ_T0048180.1 MGP_LPJ_G0023868.1 mouse_genomes_project 17 59657866 59680311 - MGP_LPJ_P0048180 C3 protein_coding protein_coding MGP_LPJ_T0048181.1 MGP_LPJ_G0023868.1 mouse_genomes_project 17 59668117 59672302 - C3 protein_coding processed_transcript MGP_LPJ_T0046216.1 MGP_LPJ_G0023312.1 mouse_genomes_project 17 26235547 26240412 + Bnip1 protein_coding retained_intron MGP_LPJ_T0046217.1 MGP_LPJ_G0023312.1 mouse_genomes_project 17 26235556 26240413 + Bnip1 protein_coding retained_intron MGP_LPJ_T0046218.1 MGP_LPJ_G0023312.1 mouse_genomes_project 17 26235558 26249924 + MGP_LPJ_P0046218 Bnip1 protein_coding protein_coding MGP_LPJ_T0046219.1 MGP_LPJ_G0023312.1 mouse_genomes_project 17 26235558 26249576 + MGP_LPJ_P0046219 Bnip1 protein_coding protein_coding MGP_LPJ_T0046220.1 MGP_LPJ_G0023312.1 mouse_genomes_project 17 26235586 26249915 + MGP_LPJ_P0046220 Bnip1 protein_coding nonsense_mediated_decay MGP_LPJ_T0046221.1 MGP_LPJ_G0023312.1 mouse_genomes_project 17 26235600 26249472 + MGP_LPJ_P0046221 Bnip1 protein_coding nonsense_mediated_decay MGP_LPJ_T0046222.1 MGP_LPJ_G0023312.1 mouse_genomes_project 17 26241180 26247403 + Bnip1 protein_coding retained_intron MGP_LPJ_T0046223.1 MGP_LPJ_G0023312.1 mouse_genomes_project 17 26248169 26249960 + Bnip1 protein_coding retained_intron MGP_LPJ_T0045664.1 MGP_LPJ_G0023174.1 mouse_genomes_project 17 22894530 22904872 + MGP_LPJ_P0045664 Pkmyt1 protein_coding protein_coding MGP_LPJ_T0048051.1 MGP_LPJ_G0023816.1 mouse_genomes_project 17 58352520 58359751 + MGP_LPJ_P0048051 Mpnd protein_coding protein_coding MGP_LPJ_T0048052.1 MGP_LPJ_G0023816.1 mouse_genomes_project 17 58357029 58364590 + MGP_LPJ_P0048052 Mpnd protein_coding protein_coding MGP_LPJ_T0048053.1 MGP_LPJ_G0023816.1 mouse_genomes_project 17 58357036 58364446 + MGP_LPJ_P0048053 Mpnd protein_coding protein_coding MGP_LPJ_T0048054.1 MGP_LPJ_G0023816.1 mouse_genomes_project 17 58357059 58364453 + MGP_LPJ_P0048054 Mpnd protein_coding protein_coding MGP_LPJ_T0048055.1 MGP_LPJ_G0023816.1 mouse_genomes_project 17 58357083 58360149 + Mpnd protein_coding retained_intron MGP_LPJ_T0048056.1 MGP_LPJ_G0023816.1 mouse_genomes_project 17 58357161 58364414 + MGP_LPJ_P0048056 Mpnd protein_coding protein_coding MGP_LPJ_T0048057.1 MGP_LPJ_G0023816.1 mouse_genomes_project 17 58357761 58359494 + Mpnd protein_coding retained_intron MGP_LPJ_T0048058.1 MGP_LPJ_G0023816.1 mouse_genomes_project 17 58358268 58363297 + MGP_LPJ_P0048058 Mpnd protein_coding protein_coding MGP_LPJ_T0048059.1 MGP_LPJ_G0023816.1 mouse_genomes_project 17 58359769 58362924 + Mpnd protein_coding retained_intron MGP_LPJ_T0046685.1 MGP_LPJ_G0023429.1 mouse_genomes_project 17 33209572 33228855 + MGP_LPJ_P0046685 Zfp563 protein_coding protein_coding MGP_LPJ_T0046686.1 MGP_LPJ_G0023429.1 mouse_genomes_project 17 33209826 33227376 + MGP_LPJ_P0046686 Zfp563 protein_coding protein_coding MGP_LPJ_T0046687.1 MGP_LPJ_G0023429.1 mouse_genomes_project 17 33212720 33227710 + MGP_LPJ_P0046687 Zfp563 protein_coding protein_coding MGP_LPJ_T0048466.1 MGP_LPJ_G0023958.1 mouse_genomes_project 17 82749172 82787718 + MGP_LPJ_P0048466 Qpct protein_coding protein_coding MGP_LPJ_T0003788.1 MGP_LPJ_G0003408.1 mouse_genomes_project 17 51920996 51925195 - Gm16555 antisense antisense MGP_LPJ_T0010247.1 MGP_LPJ_G0008365.1 mouse_genomes_project 17 96263548 96263683 + Gm44345 miRNA miRNA MGP_LPJ_T0047477.1 MGP_LPJ_G0023602.1 mouse_genomes_project 17 37940330 37970555 + MGP_LPJ_P0047477 Gabbr1 protein_coding protein_coding MGP_LPJ_T0047478.1 MGP_LPJ_G0023602.1 mouse_genomes_project 17 37940384 37969778 + MGP_LPJ_P0047478 Gabbr1 protein_coding nonsense_mediated_decay MGP_LPJ_T0047479.1 MGP_LPJ_G0023602.1 mouse_genomes_project 17 37940392 37943832 + MGP_LPJ_P0047479 Gabbr1 protein_coding protein_coding MGP_LPJ_T0047480.1 MGP_LPJ_G0023602.1 mouse_genomes_project 17 37940563 37941205 + Gabbr1 protein_coding retained_intron MGP_LPJ_T0047481.1 MGP_LPJ_G0023602.1 mouse_genomes_project 17 37940932 37943832 + MGP_LPJ_P0047481 Gabbr1 protein_coding protein_coding MGP_LPJ_T0047482.1 MGP_LPJ_G0023602.1 mouse_genomes_project 17 37942942 37945492 + Gabbr1 protein_coding processed_transcript MGP_LPJ_T0047483.1 MGP_LPJ_G0023602.1 mouse_genomes_project 17 37944995 37969792 + MGP_LPJ_P0047483 Gabbr1 protein_coding protein_coding MGP_LPJ_T0047484.1 MGP_LPJ_G0023602.1 mouse_genomes_project 17 37945038 37950730 + MGP_LPJ_P0047484 Gabbr1 protein_coding protein_coding MGP_LPJ_T0047485.1 MGP_LPJ_G0023602.1 mouse_genomes_project 17 37950084 37951237 + Gabbr1 protein_coding retained_intron MGP_LPJ_T0047486.1 MGP_LPJ_G0023602.1 mouse_genomes_project 17 37957347 37959221 + Gabbr1 protein_coding retained_intron MGP_LPJ_T0047487.1 MGP_LPJ_G0023602.1 mouse_genomes_project 17 37965943 37967714 + Gabbr1 protein_coding retained_intron MGP_LPJ_T0045630.1 MGP_LPJ_G0023165.1 mouse_genomes_project 17 22762213 22772391 + MGP_LPJ_P0045630 Zscan10 protein_coding protein_coding MGP_LPJ_T0045631.1 MGP_LPJ_G0023165.1 mouse_genomes_project 17 22762213 22772384 + MGP_LPJ_P0045631 Zscan10 protein_coding protein_coding MGP_LPJ_T0045632.1 MGP_LPJ_G0023165.1 mouse_genomes_project 17 22762213 22772384 + MGP_LPJ_P0045632 Zscan10 protein_coding protein_coding MGP_LPJ_T0045633.1 MGP_LPJ_G0023165.1 mouse_genomes_project 17 22762219 22772194 + MGP_LPJ_P0045633 Zscan10 protein_coding protein_coding MGP_LPJ_T0045634.1 MGP_LPJ_G0023165.1 mouse_genomes_project 17 22762219 22772194 + MGP_LPJ_P0045634 Zscan10 protein_coding protein_coding MGP_LPJ_T0045635.1 MGP_LPJ_G0023165.1 mouse_genomes_project 17 22762298 22771073 + MGP_LPJ_P0045635 Zscan10 protein_coding protein_coding MGP_LPJ_T0045636.1 MGP_LPJ_G0023165.1 mouse_genomes_project 17 22766849 22768539 + Zscan10 protein_coding retained_intron MGP_LPJ_T0045637.1 MGP_LPJ_G0023165.1 mouse_genomes_project 17 22766873 22771069 + MGP_LPJ_P0045637 Zscan10 protein_coding protein_coding MGP_LPJ_T0045638.1 MGP_LPJ_G0023165.1 mouse_genomes_project 17 22766882 22771069 + MGP_LPJ_P0045638 Zscan10 protein_coding nonsense_mediated_decay MGP_LPJ_T0045639.1 MGP_LPJ_G0023165.1 mouse_genomes_project 17 22766882 22771070 + MGP_LPJ_P0045639 Zscan10 protein_coding protein_coding MGP_LPJ_T0045640.1 MGP_LPJ_G0023165.1 mouse_genomes_project 17 22766883 22771070 + MGP_LPJ_P0045640 Zscan10 protein_coding protein_coding MGP_LPJ_T0045641.1 MGP_LPJ_G0023165.1 mouse_genomes_project 17 22768858 22771069 + Zscan10 protein_coding retained_intron MGP_LPJ_T0045768.1 MGP_LPJ_G0023205.1 mouse_genomes_project 17 23715495 23733158 + MGP_LPJ_P0045768 Eci1 protein_coding protein_coding MGP_LPJ_T0045769.1 MGP_LPJ_G0023205.1 mouse_genomes_project 17 23715515 23730706 + MGP_LPJ_P0045769 Eci1 protein_coding unknown_likely_coding MGP_LPJ_T0048134.1 MGP_LPJ_G0023840.1 mouse_genomes_project 17 59004777 59005381 + MGP_LPJ_P0048134 Rpl36 protein_coding protein_coding MGP_LPJ_T0046307.1 MGP_LPJ_G0023336.1 mouse_genomes_project 17 27462533 27505633 + MGP_LPJ_P0046307 Uhrf1bp1 protein_coding protein_coding MGP_LPJ_T0046308.1 MGP_LPJ_G0023336.1 mouse_genomes_project 17 27463286 27485451 + Uhrf1bp1 protein_coding processed_transcript MGP_LPJ_T0046309.1 MGP_LPJ_G0023336.1 mouse_genomes_project 17 27495637 27500899 + Uhrf1bp1 protein_coding processed_transcript MGP_LPJ_T0101936.1 MGP_LPJ_G0039973.1 mouse_genomes_project 17 19940689 19941202 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0048136.1 MGP_LPJ_G0023842.1 mouse_genomes_project 17 59019542 59061165 + MGP_LPJ_P0048136 Catsperd protein_coding protein_coding MGP_LPJ_T0047601.1 MGP_LPJ_G0023687.1 mouse_genomes_project 17 45207791 45234363 - MGP_LPJ_P0047601 Slc25a27 protein_coding protein_coding MGP_LPJ_T0048559.1 MGP_LPJ_G0024002.1 mouse_genomes_project 17 90232338 90767373 + MGP_LPJ_P0048559 Prkce protein_coding protein_coding MGP_LPJ_T0048560.1 MGP_LPJ_G0024002.1 mouse_genomes_project 17 90232372 90242067 + MGP_LPJ_P0048560 Prkce protein_coding nonsense_mediated_decay MGP_LPJ_T0048561.1 MGP_LPJ_G0024002.1 mouse_genomes_project 17 90232727 90764870 + MGP_LPJ_P0048561 Prkce protein_coding protein_coding MGP_LPJ_T0048562.1 MGP_LPJ_G0024002.1 mouse_genomes_project 17 90584364 90591786 + Prkce protein_coding retained_intron MGP_LPJ_T0048563.1 MGP_LPJ_G0024002.1 mouse_genomes_project 17 90587152 90592131 + Prkce protein_coding retained_intron MGP_LPJ_T0046494.1 MGP_LPJ_G0023376.1 mouse_genomes_project 17 29418636 29445740 + MGP_LPJ_P0046494 Rnf8 protein_coding protein_coding MGP_LPJ_T0046495.1 MGP_LPJ_G0023376.1 mouse_genomes_project 17 29418668 29430914 + MGP_LPJ_P0046495 Rnf8 protein_coding protein_coding MGP_LPJ_T0046496.1 MGP_LPJ_G0023376.1 mouse_genomes_project 17 29418700 29445663 + MGP_LPJ_P0046496 Rnf8 protein_coding nonsense_mediated_decay MGP_LPJ_T0046498.1 MGP_LPJ_G0023376.1 mouse_genomes_project 17 29418736 29423406 + Rnf8 protein_coding processed_transcript MGP_LPJ_T0046499.1 MGP_LPJ_G0023376.1 mouse_genomes_project 17 29419983 29430947 + MGP_LPJ_P0046499 Rnf8 protein_coding protein_coding MGP_LPJ_T0046500.1 MGP_LPJ_G0023376.1 mouse_genomes_project 17 29432509 29439888 + Rnf8 protein_coding retained_intron MGP_LPJ_T0046501.1 MGP_LPJ_G0023376.1 mouse_genomes_project 17 29435471 29445611 + Rnf8 protein_coding retained_intron MGP_LPJ_T0046502.1 MGP_LPJ_G0023376.1 mouse_genomes_project 17 29438436 29445632 + Rnf8 protein_coding retained_intron MGP_LPJ_T0047563.1 MGP_LPJ_G0023668.1 mouse_genomes_project 17 42170209 42180426 + MGP_LPJ_P0047563 Esp1 protein_coding protein_coding MGP_LPJ_T0046045.1 MGP_LPJ_G0023273.1 mouse_genomes_project 17 25180403 25184315 + MGP_LPJ_P0046045 Ccdc78 protein_coding protein_coding MGP_LPJ_T0046046.1 MGP_LPJ_G0023273.1 mouse_genomes_project 17 25180439 25184036 + MGP_LPJ_P0046046 Ccdc78 protein_coding unknown_likely_coding MGP_LPJ_T0045707.1 MGP_LPJ_G0023192.1 mouse_genomes_project 17 23281001 23288414 + MGP_LPJ_P0045707 Gm5225 protein_coding protein_coding MGP_LPJ_T0046574.1 MGP_LPJ_G0023397.1 mouse_genomes_project 17 31519297 31532384 + MGP_LPJ_P0046574 Ndufv3 protein_coding protein_coding MGP_LPJ_T0046575.1 MGP_LPJ_G0023397.1 mouse_genomes_project 17 31519332 31528900 + Ndufv3 protein_coding processed_transcript MGP_LPJ_T0046576.1 MGP_LPJ_G0023397.1 mouse_genomes_project 17 31519340 31532387 + MGP_LPJ_P0046576 Ndufv3 protein_coding protein_coding MGP_LPJ_T0046577.1 MGP_LPJ_G0023397.1 mouse_genomes_project 17 31519367 31528303 + MGP_LPJ_P0046577 Ndufv3 protein_coding protein_coding MGP_LPJ_T0046578.1 MGP_LPJ_G0023397.1 mouse_genomes_project 17 31530153 31532387 + Ndufv3 protein_coding processed_transcript MGP_LPJ_T0007001.1 MGP_LPJ_G0005762.1 mouse_genomes_project 17 90967375 90968062 + Gm29168 lincRNA lincRNA MGP_LPJ_T0046181.1 MGP_LPJ_G0023303.1 mouse_genomes_project 17 25683087 25715117 + MGP_LPJ_P0046181 Luc7l protein_coding protein_coding MGP_LPJ_T0046182.1 MGP_LPJ_G0023303.1 mouse_genomes_project 17 25683128 25720333 + MGP_LPJ_P0046182 Luc7l protein_coding protein_coding MGP_LPJ_T0046183.1 MGP_LPJ_G0023303.1 mouse_genomes_project 17 25683133 25712213 + MGP_LPJ_P0046183 Luc7l protein_coding protein_coding MGP_LPJ_T0046184.1 MGP_LPJ_G0023303.1 mouse_genomes_project 17 25683143 25716813 + MGP_LPJ_P0046184 Luc7l protein_coding nonsense_mediated_decay MGP_LPJ_T0046185.1 MGP_LPJ_G0023303.1 mouse_genomes_project 17 25683143 25716811 + MGP_LPJ_P0046185 Luc7l protein_coding protein_coding MGP_LPJ_T0046186.1 MGP_LPJ_G0023303.1 mouse_genomes_project 17 25683161 25715118 + Luc7l protein_coding retained_intron MGP_LPJ_T0046187.1 MGP_LPJ_G0023303.1 mouse_genomes_project 17 25683176 25715121 + MGP_LPJ_P0046187 Luc7l protein_coding nonsense_mediated_decay MGP_LPJ_T0046188.1 MGP_LPJ_G0023303.1 mouse_genomes_project 17 25683399 25698175 + MGP_LPJ_P0046188 Luc7l protein_coding protein_coding MGP_LPJ_T0046189.1 MGP_LPJ_G0023303.1 mouse_genomes_project 17 25683562 25684431 + Luc7l protein_coding processed_transcript MGP_LPJ_T0046190.1 MGP_LPJ_G0023303.1 mouse_genomes_project 17 25699056 25716789 + MGP_LPJ_P0046190 Luc7l protein_coding protein_coding MGP_LPJ_T0045308.1 MGP_LPJ_G0023031.1 mouse_genomes_project 17 5038081 5186177 - MGP_LPJ_P0045308 Rps6ka2 protein_coding protein_coding MGP_LPJ_T0047334.1 MGP_LPJ_G0023567.1 mouse_genomes_project 17 36484360 36487358 - MGP_LPJ_P0047334 2310061I04Rik protein_coding protein_coding MGP_LPJ_T0047335.1 MGP_LPJ_G0023567.1 mouse_genomes_project 17 36484364 36488890 - MGP_LPJ_P0047335 2310061I04Rik protein_coding protein_coding MGP_LPJ_T0047336.1 MGP_LPJ_G0023567.1 mouse_genomes_project 17 36484518 36487383 - MGP_LPJ_P0047336 2310061I04Rik protein_coding protein_coding MGP_LPJ_T0047337.1 MGP_LPJ_G0023567.1 mouse_genomes_project 17 36486506 36488533 - MGP_LPJ_P0047337 2310061I04Rik protein_coding protein_coding MGP_LPJ_T0047338.1 MGP_LPJ_G0023567.1 mouse_genomes_project 17 36487233 36488068 - 2310061I04Rik protein_coding processed_transcript MGP_LPJ_T0047339.1 MGP_LPJ_G0023567.1 mouse_genomes_project 17 36487382 36488563 - MGP_LPJ_P0047339 2310061I04Rik protein_coding protein_coding MGP_LPJ_T0047340.1 MGP_LPJ_G0023567.1 mouse_genomes_project 17 36487735 36488772 - 2310061I04Rik protein_coding processed_transcript MGP_LPJ_T0046097.1 MGP_LPJ_G0023285.1 mouse_genomes_project 17 25274256 25275953 + MGP_LPJ_P0046097 Mettl26 protein_coding nonsense_mediated_decay MGP_LPJ_T0046098.1 MGP_LPJ_G0023285.1 mouse_genomes_project 17 25274292 25275962 + MGP_LPJ_P0046098 Mettl26 protein_coding protein_coding MGP_LPJ_T0046099.1 MGP_LPJ_G0023285.1 mouse_genomes_project 17 25274293 25275962 + MGP_LPJ_P0046099 Mettl26 protein_coding protein_coding MGP_LPJ_T0046100.1 MGP_LPJ_G0023285.1 mouse_genomes_project 17 25274322 25284713 + MGP_LPJ_P0046100 Mettl26 protein_coding protein_coding MGP_LPJ_T0046101.1 MGP_LPJ_G0023285.1 mouse_genomes_project 17 25274322 25275790 + MGP_LPJ_P0046101 Mettl26 protein_coding protein_coding MGP_LPJ_T0046156.1 MGP_LPJ_G0023299.1 mouse_genomes_project 17 25621827 25624916 - MGP_LPJ_P0046156 Pdia2 protein_coding protein_coding MGP_LPJ_T0046157.1 MGP_LPJ_G0023299.1 mouse_genomes_project 17 25621834 25622745 - MGP_LPJ_P0046157 Pdia2 protein_coding protein_coding MGP_LPJ_T0046158.1 MGP_LPJ_G0023299.1 mouse_genomes_project 17 25621853 25624891 - MGP_LPJ_P0046158 Pdia2 protein_coding protein_coding MGP_LPJ_T0046160.1 MGP_LPJ_G0023299.1 mouse_genomes_project 17 25623322 25624837 - MGP_LPJ_P0046160 Pdia2 protein_coding protein_coding MGP_LPJ_T0013220.1 MGP_LPJ_G0011311.1 mouse_genomes_project 17 36123089 36123284 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013215.1 MGP_LPJ_G0011306.1 mouse_genomes_project 17 34204136 34204395 - processed_pseudogene processed_pseudogene MGP_LPJ_T0045658.1 MGP_LPJ_G0023172.1 mouse_genomes_project 17 22856051 22857486 - MGP_LPJ_P0045658 Cldn9 protein_coding protein_coding MGP_LPJ_T0047952.1 MGP_LPJ_G0023781.1 mouse_genomes_project 17 50378105 50406345 - MGP_LPJ_P0047952 Nfya protein_coding protein_coding MGP_LPJ_T0047953.1 MGP_LPJ_G0023781.1 mouse_genomes_project 17 50378109 50406486 - MGP_LPJ_P0047953 Nfya protein_coding protein_coding MGP_LPJ_T0047954.1 MGP_LPJ_G0023781.1 mouse_genomes_project 17 50378116 50406345 - MGP_LPJ_P0047954 Nfya protein_coding protein_coding MGP_LPJ_T0047955.1 MGP_LPJ_G0023781.1 mouse_genomes_project 17 50380243 50391775 - MGP_LPJ_P0047955 Nfya protein_coding protein_coding MGP_LPJ_T0047956.1 MGP_LPJ_G0023781.1 mouse_genomes_project 17 50380319 50406310 - MGP_LPJ_P0047956 Nfya protein_coding protein_coding MGP_LPJ_T0047957.1 MGP_LPJ_G0023781.1 mouse_genomes_project 17 50380347 50384455 - MGP_LPJ_P0047957 Nfya protein_coding protein_coding MGP_LPJ_T0047958.1 MGP_LPJ_G0023781.1 mouse_genomes_project 17 50380462 50384691 - MGP_LPJ_P0047958 Nfya protein_coding protein_coding MGP_LPJ_T0047959.1 MGP_LPJ_G0023781.1 mouse_genomes_project 17 50382111 50383377 - Nfya protein_coding retained_intron MGP_LPJ_T0047960.1 MGP_LPJ_G0023781.1 mouse_genomes_project 17 50383247 50390269 - MGP_LPJ_P0047960 Nfya protein_coding protein_coding MGP_LPJ_T0047961.1 MGP_LPJ_G0023781.1 mouse_genomes_project 17 50383275 50406321 - MGP_LPJ_P0047961 Nfya protein_coding protein_coding MGP_LPJ_T0047962.1 MGP_LPJ_G0023781.1 mouse_genomes_project 17 50384449 50387285 - Nfya protein_coding retained_intron MGP_LPJ_T0047963.1 MGP_LPJ_G0023781.1 mouse_genomes_project 17 50386593 50406268 - Nfya protein_coding retained_intron MGP_LPJ_T0047964.1 MGP_LPJ_G0023781.1 mouse_genomes_project 17 50389157 50406330 - Nfya protein_coding retained_intron MGP_LPJ_T0045984.1 MGP_LPJ_G0023260.1 mouse_genomes_project 17 24722598 24727773 + MGP_LPJ_P0045984 Tpsg1 protein_coding protein_coding MGP_LPJ_T0045985.1 MGP_LPJ_G0023260.1 mouse_genomes_project 17 24722614 24727482 + MGP_LPJ_P0045985 Tpsg1 protein_coding protein_coding MGP_LPJ_T0045986.1 MGP_LPJ_G0023260.1 mouse_genomes_project 17 24723872 24727773 + MGP_LPJ_P0045986 Tpsg1 protein_coding protein_coding MGP_LPJ_T0045987.1 MGP_LPJ_G0023260.1 mouse_genomes_project 17 24723903 24727775 + MGP_LPJ_P0045987 Tpsg1 protein_coding protein_coding MGP_LPJ_T0045988.1 MGP_LPJ_G0023260.1 mouse_genomes_project 17 24726341 24727718 + MGP_LPJ_P0045988 Tpsg1 protein_coding protein_coding MGP_LPJ_T0047897.1 MGP_LPJ_G0023767.1 mouse_genomes_project 17 49606611 49666697 + MGP_LPJ_P0047897 Tfeb protein_coding protein_coding MGP_LPJ_T0047898.1 MGP_LPJ_G0023767.1 mouse_genomes_project 17 49607181 49660362 + MGP_LPJ_P0047898 Tfeb protein_coding protein_coding MGP_LPJ_T0047899.1 MGP_LPJ_G0023767.1 mouse_genomes_project 17 49607509 49666693 + MGP_LPJ_P0047899 Tfeb protein_coding protein_coding MGP_LPJ_T0047900.1 MGP_LPJ_G0023767.1 mouse_genomes_project 17 49608484 49663348 + MGP_LPJ_P0047900 Tfeb protein_coding protein_coding MGP_LPJ_T0047901.1 MGP_LPJ_G0023767.1 mouse_genomes_project 17 49626107 49660362 + MGP_LPJ_P0047901 Tfeb protein_coding protein_coding MGP_LPJ_T0047902.1 MGP_LPJ_G0023767.1 mouse_genomes_project 17 49630938 49660474 + MGP_LPJ_P0047902 Tfeb protein_coding protein_coding MGP_LPJ_T0047903.1 MGP_LPJ_G0023767.1 mouse_genomes_project 17 49634933 49660575 + MGP_LPJ_P0047903 Tfeb protein_coding protein_coding MGP_LPJ_T0047904.1 MGP_LPJ_G0023767.1 mouse_genomes_project 17 49643337 49660577 + MGP_LPJ_P0047904 Tfeb protein_coding protein_coding MGP_LPJ_T0047905.1 MGP_LPJ_G0023767.1 mouse_genomes_project 17 49643337 49660579 + MGP_LPJ_P0047905 Tfeb protein_coding protein_coding MGP_LPJ_T0047906.1 MGP_LPJ_G0023767.1 mouse_genomes_project 17 49657152 49660655 + MGP_LPJ_P0047906 Tfeb protein_coding protein_coding MGP_LPJ_T0047907.1 MGP_LPJ_G0023767.1 mouse_genomes_project 17 49659997 49666693 + MGP_LPJ_P0047907 Tfeb protein_coding protein_coding MGP_LPJ_T0047908.1 MGP_LPJ_G0023767.1 mouse_genomes_project 17 49660432 49666694 + MGP_LPJ_P0047908 Tfeb protein_coding protein_coding MGP_LPJ_T0047909.1 MGP_LPJ_G0023767.1 mouse_genomes_project 17 49661845 49663994 + Tfeb protein_coding processed_transcript MGP_LPJ_T0047910.1 MGP_LPJ_G0023767.1 mouse_genomes_project 17 49662187 49663216 + Tfeb protein_coding retained_intron MGP_LPJ_T0047911.1 MGP_LPJ_G0023767.1 mouse_genomes_project 17 49663718 49665891 + Tfeb protein_coding retained_intron MGP_LPJ_T0047936.1 MGP_LPJ_G0023776.1 mouse_genomes_project 17 50242750 50253823 + MGP_LPJ_P0047936 Treml4 protein_coding protein_coding MGP_LPJ_T0047937.1 MGP_LPJ_G0023776.1 mouse_genomes_project 17 50242792 50252956 + MGP_LPJ_P0047937 Treml4 protein_coding protein_coding MGP_LPJ_T0047938.1 MGP_LPJ_G0023776.1 mouse_genomes_project 17 50242792 50252956 + MGP_LPJ_P0047938 Treml4 protein_coding protein_coding MGP_LPJ_T0047939.1 MGP_LPJ_G0023776.1 mouse_genomes_project 17 50242796 50253129 + MGP_LPJ_P0047939 Treml4 protein_coding protein_coding MGP_LPJ_T0047940.1 MGP_LPJ_G0023776.1 mouse_genomes_project 17 50242828 50252963 + MGP_LPJ_P0047940 Treml4 protein_coding protein_coding MGP_LPJ_T0047941.1 MGP_LPJ_G0023776.1 mouse_genomes_project 17 50250897 50252975 + Treml4 protein_coding retained_intron MGP_LPJ_T0045872.1 MGP_LPJ_G0023236.1 mouse_genomes_project 17 24219169 24225649 - MGP_LPJ_P0045872 Eme2 protein_coding protein_coding MGP_LPJ_T0045873.1 MGP_LPJ_G0023236.1 mouse_genomes_project 17 24222744 24225681 - MGP_LPJ_P0045873 Eme2 protein_coding protein_coding MGP_LPJ_T0045875.1 MGP_LPJ_G0023236.1 mouse_genomes_project 17 24222747 24225653 - MGP_LPJ_P0045875 Eme2 protein_coding nonsense_mediated_decay MGP_LPJ_T0045876.1 MGP_LPJ_G0023236.1 mouse_genomes_project 17 24223072 24225672 - Eme2 protein_coding retained_intron MGP_LPJ_T0045877.1 MGP_LPJ_G0023236.1 mouse_genomes_project 17 24223372 24224778 - Eme2 protein_coding retained_intron MGP_LPJ_T0045878.1 MGP_LPJ_G0023236.1 mouse_genomes_project 17 24223731 24225649 - Eme2 protein_coding retained_intron MGP_LPJ_T0045879.1 MGP_LPJ_G0023236.1 mouse_genomes_project 17 24223954 24225656 - Eme2 protein_coding retained_intron MGP_LPJ_T0045880.1 MGP_LPJ_G0023236.1 mouse_genomes_project 17 24224339 24225619 - Eme2 protein_coding retained_intron MGP_LPJ_T0001030.1 MGP_LPJ_G0000955.1 mouse_genomes_project 17 87895651 87899716 - TEC TEC MGP_LPJ_T0047055.1 MGP_LPJ_G0023505.1 mouse_genomes_project 17 35285276 35308147 - MGP_LPJ_P0047055 C2 protein_coding protein_coding MGP_LPJ_T0047056.1 MGP_LPJ_G0023505.1 mouse_genomes_project 17 35285277 35308221 - MGP_LPJ_P0047056 C2 protein_coding protein_coding MGP_LPJ_T0047057.1 MGP_LPJ_G0023505.1 mouse_genomes_project 17 35285278 35321854 - MGP_LPJ_P0047057 C2 protein_coding protein_coding MGP_LPJ_T0047058.1 MGP_LPJ_G0023505.1 mouse_genomes_project 17 35286344 35287085 - MGP_LPJ_P0047058 C2 protein_coding protein_coding MGP_LPJ_T0047059.1 MGP_LPJ_G0023505.1 mouse_genomes_project 17 35286841 35287625 - C2 protein_coding retained_intron MGP_LPJ_T0047060.1 MGP_LPJ_G0023505.1 mouse_genomes_project 17 35299729 35308088 - C2 protein_coding processed_transcript MGP_LPJ_T0047062.1 MGP_LPJ_G0023505.1 mouse_genomes_project 17 35319656 35321864 - C2 protein_coding processed_transcript MGP_LPJ_T0047063.1 MGP_LPJ_G0023505.1 mouse_genomes_project 17 35319659 35337272 - C2 protein_coding processed_transcript MGP_LPJ_T0047242.1 MGP_LPJ_G0023549.1 mouse_genomes_project 17 36067457 36071552 - MGP_LPJ_P0047242 Tcf19 protein_coding protein_coding MGP_LPJ_T0047243.1 MGP_LPJ_G0023549.1 mouse_genomes_project 17 36067460 36071513 - MGP_LPJ_P0047243 Tcf19 protein_coding protein_coding MGP_LPJ_T0047244.1 MGP_LPJ_G0023549.1 mouse_genomes_project 17 36069381 36071548 - MGP_LPJ_P0047244 Tcf19 protein_coding protein_coding MGP_LPJ_T0047245.1 MGP_LPJ_G0023549.1 mouse_genomes_project 17 36069545 36071275 - MGP_LPJ_P0047245 Tcf19 protein_coding protein_coding MGP_LPJ_T0013209.1 MGP_LPJ_G0011300.1 mouse_genomes_project 17 20913147 20913827 + processed_pseudogene processed_pseudogene MGP_LPJ_T0046600.1 MGP_LPJ_G0023404.1 mouse_genomes_project 17 32060132 32086944 + MGP_LPJ_P0046600 Rrp1b protein_coding protein_coding MGP_LPJ_T0046601.1 MGP_LPJ_G0023404.1 mouse_genomes_project 17 32060435 32072001 + Rrp1b protein_coding retained_intron MGP_LPJ_T0046602.1 MGP_LPJ_G0023404.1 mouse_genomes_project 17 32060461 32071994 + MGP_LPJ_P0046602 Rrp1b protein_coding nonsense_mediated_decay MGP_LPJ_T0046603.1 MGP_LPJ_G0023404.1 mouse_genomes_project 17 32072363 32086935 + Rrp1b protein_coding retained_intron MGP_LPJ_T0046604.1 MGP_LPJ_G0023404.1 mouse_genomes_project 17 32072885 32075879 + Rrp1b protein_coding retained_intron MGP_LPJ_T0046605.1 MGP_LPJ_G0023404.1 mouse_genomes_project 17 32074097 32075758 + Rrp1b protein_coding retained_intron MGP_LPJ_T0046606.1 MGP_LPJ_G0023404.1 mouse_genomes_project 17 32075882 32080681 + MGP_LPJ_P0046606 Rrp1b protein_coding nonsense_mediated_decay MGP_LPJ_T0046607.1 MGP_LPJ_G0023404.1 mouse_genomes_project 17 32076350 32080694 + Rrp1b protein_coding retained_intron MGP_LPJ_T0046608.1 MGP_LPJ_G0023404.1 mouse_genomes_project 17 32079997 32081110 + Rrp1b protein_coding processed_transcript MGP_LPJ_T0046609.1 MGP_LPJ_G0023404.1 mouse_genomes_project 17 32082367 32084652 + Rrp1b protein_coding retained_intron MGP_LPJ_T0046610.1 MGP_LPJ_G0023404.1 mouse_genomes_project 17 32083246 32084745 + Rrp1b protein_coding retained_intron MGP_LPJ_T0046942.1 MGP_LPJ_G0023486.1 mouse_genomes_project 17 34909873 34938093 + MGP_LPJ_P0046942 Notch4 protein_coding protein_coding MGP_LPJ_T0046943.1 MGP_LPJ_G0023486.1 mouse_genomes_project 17 34909903 34911222 + Notch4 protein_coding processed_transcript MGP_LPJ_T0046944.1 MGP_LPJ_G0023486.1 mouse_genomes_project 17 34909942 34937821 + MGP_LPJ_P0046944 Notch4 protein_coding nonsense_mediated_decay MGP_LPJ_T0046945.1 MGP_LPJ_G0023486.1 mouse_genomes_project 17 34910051 34941383 + MGP_LPJ_P0046945 Notch4 protein_coding unknown_likely_coding MGP_LPJ_T0046946.1 MGP_LPJ_G0023486.1 mouse_genomes_project 17 34910741 34911183 + Notch4 protein_coding retained_intron MGP_LPJ_T0046947.1 MGP_LPJ_G0023486.1 mouse_genomes_project 17 34923634 34929688 + Notch4 protein_coding processed_transcript MGP_LPJ_T0046948.1 MGP_LPJ_G0023486.1 mouse_genomes_project 17 34931142 34936212 + MGP_LPJ_P0046948 Notch4 protein_coding nonsense_mediated_decay MGP_LPJ_T0046949.1 MGP_LPJ_G0023486.1 mouse_genomes_project 17 34931142 34936264 + MGP_LPJ_P0046949 Notch4 protein_coding nonsense_mediated_decay MGP_LPJ_T0046950.1 MGP_LPJ_G0023486.1 mouse_genomes_project 17 34931828 34935242 + Notch4 protein_coding retained_intron MGP_LPJ_T0046951.1 MGP_LPJ_G0023486.1 mouse_genomes_project 17 34935254 34936213 + Notch4 protein_coding retained_intron MGP_LPJ_T0046952.1 MGP_LPJ_G0023486.1 mouse_genomes_project 17 34935864 34937063 + Notch4 protein_coding retained_intron MGP_LPJ_T0046953.1 MGP_LPJ_G0023486.1 mouse_genomes_project 17 34936534 34937091 + Notch4 protein_coding processed_transcript MGP_LPJ_T0046954.1 MGP_LPJ_G0023486.1 mouse_genomes_project 17 34936630 34937408 + Notch4 protein_coding processed_transcript MGP_LPJ_T0099215.1 MGP_LPJ_G0037478.1 mouse_genomes_project 17 32885336 32885500 - Gm23294 snRNA snRNA MGP_LPJ_T0006971.1 MGP_LPJ_G0005743.1 mouse_genomes_project 17 51186996 51188249 - 1700008K24Rik lincRNA lincRNA MGP_LPJ_T0006972.1 MGP_LPJ_G0005743.1 mouse_genomes_project 17 51186996 51188262 - 1700008K24Rik lincRNA lincRNA MGP_LPJ_T0006973.1 MGP_LPJ_G0005743.1 mouse_genomes_project 17 51186998 51188227 - 1700008K24Rik lincRNA lincRNA MGP_LPJ_T0006974.1 MGP_LPJ_G0005743.1 mouse_genomes_project 17 51186998 51188170 - 1700008K24Rik lincRNA lincRNA MGP_LPJ_T0006975.1 MGP_LPJ_G0005743.1 mouse_genomes_project 17 51187106 51188269 - 1700008K24Rik lincRNA lincRNA MGP_LPJ_T0045363.1 MGP_LPJ_G0023050.1 mouse_genomes_project 17 8241366 8993494 + Park2 protein_coding retained_intron MGP_LPJ_T0045364.1 MGP_LPJ_G0023050.1 mouse_genomes_project 17 8241366 8993494 + Park2 protein_coding retained_intron MGP_LPJ_T0045365.1 MGP_LPJ_G0023050.1 mouse_genomes_project 17 8241366 9517347 + MGP_LPJ_P0045365 Park2 protein_coding protein_coding MGP_LPJ_T0045366.1 MGP_LPJ_G0023050.1 mouse_genomes_project 17 8241373 8346361 + Park2 protein_coding processed_transcript MGP_LPJ_T0045367.1 MGP_LPJ_G0023050.1 mouse_genomes_project 17 8474551 8927895 + MGP_LPJ_P0045367 Park2 protein_coding protein_coding MGP_LPJ_T0045368.1 MGP_LPJ_G0023050.1 mouse_genomes_project 17 8723925 9048134 + MGP_LPJ_P0045368 Park2 protein_coding protein_coding MGP_LPJ_T0045369.1 MGP_LPJ_G0023050.1 mouse_genomes_project 17 9279198 9515646 + MGP_LPJ_P0045369 Park2 protein_coding protein_coding MGP_LPJ_T0045370.1 MGP_LPJ_G0023050.1 mouse_genomes_project 17 9291536 9313843 + Park2 protein_coding processed_transcript MGP_LPJ_T0045371.1 MGP_LPJ_G0023050.1 mouse_genomes_project 17 9480762 9517342 + Park2 protein_coding processed_transcript MGP_LPJ_T0045448.1 MGP_LPJ_G0023073.1 mouse_genomes_project 17 11956431 11965484 - MGP_LPJ_P0045448 Dact2 protein_coding protein_coding MGP_LPJ_T0013233.1 MGP_LPJ_G0011324.1 mouse_genomes_project 17 38919704 38922902 - processed_pseudogene processed_pseudogene MGP_LPJ_T0045655.1 MGP_LPJ_G0023170.1 mouse_genomes_project 17 22848899 22850900 - MGP_LPJ_P0045655 Tnfrsf12a protein_coding protein_coding MGP_LPJ_T0045656.1 MGP_LPJ_G0023170.1 mouse_genomes_project 17 22848899 22850900 - MGP_LPJ_P0045656 Tnfrsf12a protein_coding protein_coding MGP_LPJ_T0046454.1 MGP_LPJ_G0023365.1 mouse_genomes_project 17 28897351 28910798 + MGP_LPJ_P0046454 Rab44 protein_coding protein_coding MGP_LPJ_T0046455.1 MGP_LPJ_G0023365.1 mouse_genomes_project 17 28898634 28910061 + Rab44 protein_coding processed_transcript MGP_LPJ_T0045720.1 MGP_LPJ_G0023196.1 mouse_genomes_project 17 23426080 23434013 - Amdhd2 protein_coding retained_intron MGP_LPJ_T0045721.1 MGP_LPJ_G0023196.1 mouse_genomes_project 17 23426080 23426987 - Amdhd2 protein_coding processed_transcript MGP_LPJ_T0045722.1 MGP_LPJ_G0023196.1 mouse_genomes_project 17 23426080 23434049 - MGP_LPJ_P0045722 Amdhd2 protein_coding protein_coding MGP_LPJ_T0045723.1 MGP_LPJ_G0023196.1 mouse_genomes_project 17 23426082 23427840 - MGP_LPJ_P0045723 Amdhd2 protein_coding protein_coding MGP_LPJ_T0045724.1 MGP_LPJ_G0023196.1 mouse_genomes_project 17 23428589 23433593 - MGP_LPJ_P0045724 Amdhd2 protein_coding protein_coding MGP_LPJ_T0045725.1 MGP_LPJ_G0023196.1 mouse_genomes_project 17 23432494 23433976 - Amdhd2 protein_coding retained_intron MGP_LPJ_T0101945.1 MGP_LPJ_G0039982.1 mouse_genomes_project 17 34128486 34128876 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0047012.1 MGP_LPJ_G0023498.1 mouse_genomes_project 17 35115627 35227804 - protein_coding retained_intron MGP_LPJ_T0048087.1 MGP_LPJ_G0023833.1 mouse_genomes_project 17 58670239 58690802 + MGP_LPJ_P0048087 protein_coding protein_coding MGP_LPJ_T0048088.1 MGP_LPJ_G0023833.1 mouse_genomes_project 17 58670318 58690802 + MGP_LPJ_P0048088 protein_coding protein_coding MGP_LPJ_T0048089.1 MGP_LPJ_G0023833.1 mouse_genomes_project 17 58671231 58690802 + MGP_LPJ_P0048089 protein_coding protein_coding MGP_LPJ_T0048090.1 MGP_LPJ_G0023833.1 mouse_genomes_project 17 58671266 58690802 + MGP_LPJ_P0048090 protein_coding protein_coding MGP_LPJ_T0048091.1 MGP_LPJ_G0023833.1 mouse_genomes_project 17 58671325 58677638 + MGP_LPJ_P0048091 protein_coding protein_coding MGP_LPJ_T0048092.1 MGP_LPJ_G0023833.1 mouse_genomes_project 17 58679542 58680056 + protein_coding retained_intron MGP_LPJ_T0048093.1 MGP_LPJ_G0023833.1 mouse_genomes_project 17 58684905 58689401 + protein_coding retained_intron MGP_LPJ_T0045302.1 MGP_LPJ_G0023030.1 mouse_genomes_project 17 4985192 5019095 - MGP_LPJ_P0045302 protein_coding protein_coding MGP_LPJ_T0045304.1 MGP_LPJ_G0023030.1 mouse_genomes_project 17 4985550 5017176 - MGP_LPJ_P0045304 protein_coding protein_coding MGP_LPJ_T0045306.1 MGP_LPJ_G0023030.1 mouse_genomes_project 17 4986039 5016518 - MGP_LPJ_P0045306 protein_coding protein_coding MGP_LPJ_T0011453.1 MGP_LPJ_G0009571.1 mouse_genomes_project 17 89622242 89622330 + Gm27435 misc_RNA misc_RNA MGP_LPJ_T0047254.1 MGP_LPJ_G0023552.1 mouse_genomes_project 17 36112897 36118432 + MGP_LPJ_P0047254 Cdsn protein_coding protein_coding MGP_LPJ_T0003783.1 MGP_LPJ_G0003405.1 mouse_genomes_project 17 47337467 47340160 + Gm16172 antisense antisense MGP_LPJ_T0046550.1 MGP_LPJ_G0023395.1 mouse_genomes_project 17 31364083 31470029 + MGP_LPJ_P0046550 Pde9a protein_coding protein_coding MGP_LPJ_T0046551.1 MGP_LPJ_G0023395.1 mouse_genomes_project 17 31364098 31469875 + MGP_LPJ_P0046551 Pde9a protein_coding nonsense_mediated_decay MGP_LPJ_T0046552.1 MGP_LPJ_G0023395.1 mouse_genomes_project 17 31364098 31469875 + MGP_LPJ_P0046552 Pde9a protein_coding protein_coding MGP_LPJ_T0046553.1 MGP_LPJ_G0023395.1 mouse_genomes_project 17 31364098 31469875 + MGP_LPJ_P0046553 Pde9a protein_coding nonsense_mediated_decay MGP_LPJ_T0046554.1 MGP_LPJ_G0023395.1 mouse_genomes_project 17 31364103 31469878 + MGP_LPJ_P0046554 Pde9a protein_coding protein_coding MGP_LPJ_T0046555.1 MGP_LPJ_G0023395.1 mouse_genomes_project 17 31364111 31469800 + MGP_LPJ_P0046555 Pde9a protein_coding nonsense_mediated_decay MGP_LPJ_T0046556.1 MGP_LPJ_G0023395.1 mouse_genomes_project 17 31364123 31469878 + MGP_LPJ_P0046556 Pde9a protein_coding nonsense_mediated_decay MGP_LPJ_T0046557.1 MGP_LPJ_G0023395.1 mouse_genomes_project 17 31364125 31465746 + Pde9a protein_coding retained_intron MGP_LPJ_T0046558.1 MGP_LPJ_G0023395.1 mouse_genomes_project 17 31364143 31447437 + MGP_LPJ_P0046558 Pde9a protein_coding nonsense_mediated_decay MGP_LPJ_T0046559.1 MGP_LPJ_G0023395.1 mouse_genomes_project 17 31418358 31451448 + MGP_LPJ_P0046559 Pde9a protein_coding protein_coding MGP_LPJ_T0046560.1 MGP_LPJ_G0023395.1 mouse_genomes_project 17 31430068 31452510 + Pde9a protein_coding retained_intron MGP_LPJ_T0046561.1 MGP_LPJ_G0023395.1 mouse_genomes_project 17 31445642 31454020 + Pde9a protein_coding retained_intron MGP_LPJ_T0046562.1 MGP_LPJ_G0023395.1 mouse_genomes_project 17 31453947 31469860 + MGP_LPJ_P0046562 Pde9a protein_coding protein_coding MGP_LPJ_T0046563.1 MGP_LPJ_G0023395.1 mouse_genomes_project 17 31464991 31469825 + Pde9a protein_coding processed_transcript MGP_LPJ_T0045587.1 MGP_LPJ_G0023147.1 mouse_genomes_project 17 20451519 20451774 + MGP_LPJ_P0045587 Gm10226 protein_coding protein_coding MGP_LPJ_T0046302.1 MGP_LPJ_G0023334.1 mouse_genomes_project 17 27345606 27421351 - MGP_LPJ_P0046302 D17Wsu92e protein_coding protein_coding MGP_LPJ_T0046303.1 MGP_LPJ_G0023334.1 mouse_genomes_project 17 27345621 27421351 - MGP_LPJ_P0046303 D17Wsu92e protein_coding protein_coding MGP_LPJ_T0046304.1 MGP_LPJ_G0023334.1 mouse_genomes_project 17 27361874 27421351 - MGP_LPJ_P0046304 D17Wsu92e protein_coding protein_coding MGP_LPJ_T0046492.1 MGP_LPJ_G0023375.1 mouse_genomes_project 17 29352777 29409714 + MGP_LPJ_P0046492 Tbc1d22b protein_coding protein_coding MGP_LPJ_T0046493.1 MGP_LPJ_G0023375.1 mouse_genomes_project 17 29375301 29409713 + Tbc1d22b protein_coding retained_intron MGP_LPJ_T0046344.1 MGP_LPJ_G0023344.1 mouse_genomes_project 17 27953300 27967903 + MGP_LPJ_P0046344 Fance protein_coding protein_coding MGP_LPJ_T0046345.1 MGP_LPJ_G0023344.1 mouse_genomes_project 17 27953317 27967903 + Fance protein_coding retained_intron MGP_LPJ_T0046346.1 MGP_LPJ_G0023344.1 mouse_genomes_project 17 27953336 27967902 + MGP_LPJ_P0046346 Fance protein_coding protein_coding MGP_LPJ_T0046347.1 MGP_LPJ_G0023344.1 mouse_genomes_project 17 27953342 27967904 + MGP_LPJ_P0046347 Fance protein_coding protein_coding MGP_LPJ_T0046348.1 MGP_LPJ_G0023344.1 mouse_genomes_project 17 27953414 27967589 + MGP_LPJ_P0046348 Fance protein_coding protein_coding MGP_LPJ_T0046349.1 MGP_LPJ_G0023344.1 mouse_genomes_project 17 27957465 27962169 + MGP_LPJ_P0046349 Fance protein_coding protein_coding MGP_LPJ_T0046350.1 MGP_LPJ_G0023344.1 mouse_genomes_project 17 27957502 27958488 + Fance protein_coding retained_intron MGP_LPJ_T0046351.1 MGP_LPJ_G0023344.1 mouse_genomes_project 17 27958398 27959618 + Fance protein_coding retained_intron MGP_LPJ_T0046352.1 MGP_LPJ_G0023344.1 mouse_genomes_project 17 27958854 27960280 + Fance protein_coding processed_transcript MGP_LPJ_T0046353.1 MGP_LPJ_G0023344.1 mouse_genomes_project 17 27958909 27967620 + MGP_LPJ_P0046353 Fance protein_coding protein_coding MGP_LPJ_T0046354.1 MGP_LPJ_G0023344.1 mouse_genomes_project 17 27959208 27962153 + Fance protein_coding retained_intron MGP_LPJ_T0046355.1 MGP_LPJ_G0023344.1 mouse_genomes_project 17 27959465 27967785 + MGP_LPJ_P0046355 Fance protein_coding protein_coding MGP_LPJ_T0046356.1 MGP_LPJ_G0023344.1 mouse_genomes_project 17 27959694 27967835 + MGP_LPJ_P0046356 Fance protein_coding protein_coding MGP_LPJ_T0046357.1 MGP_LPJ_G0023344.1 mouse_genomes_project 17 27959803 27967903 + Fance protein_coding processed_transcript MGP_LPJ_T0048449.1 MGP_LPJ_G0023953.1 mouse_genomes_project 17 82570114 82595616 - MGP_LPJ_P0048449 Sult6b1 protein_coding protein_coding MGP_LPJ_T0048450.1 MGP_LPJ_G0023953.1 mouse_genomes_project 17 82571065 82583815 - Sult6b1 protein_coding processed_transcript MGP_LPJ_T0048451.1 MGP_LPJ_G0023953.1 mouse_genomes_project 17 82571234 82595523 - MGP_LPJ_P0048451 Sult6b1 protein_coding nonsense_mediated_decay MGP_LPJ_T0048452.1 MGP_LPJ_G0023953.1 mouse_genomes_project 17 82571234 82595523 - MGP_LPJ_P0048452 Sult6b1 protein_coding protein_coding MGP_LPJ_T0048635.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 94354901 95469739 - MGP_LPJ_P0048635 Nrxn1 protein_coding protein_coding MGP_LPJ_T0048636.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 94354914 95473686 - MGP_LPJ_P0048636 Nrxn1 protein_coding protein_coding MGP_LPJ_T0048637.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 94356683 94414992 - MGP_LPJ_P0048637 Nrxn1 protein_coding protein_coding MGP_LPJ_T0048638.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 94356685 95469747 - MGP_LPJ_P0048638 Nrxn1 protein_coding protein_coding MGP_LPJ_T0048639.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 94357081 94793620 - MGP_LPJ_P0048639 Nrxn1 protein_coding protein_coding MGP_LPJ_T0048640.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 94357551 94414996 - MGP_LPJ_P0048640 Nrxn1 protein_coding protein_coding MGP_LPJ_T0048641.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 94357578 94793634 - MGP_LPJ_P0048641 Nrxn1 protein_coding protein_coding MGP_LPJ_T0048642.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 94357951 95469558 - MGP_LPJ_P0048642 Nrxn1 protein_coding protein_coding MGP_LPJ_T0048643.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 94358135 94414736 - Nrxn1 protein_coding processed_transcript MGP_LPJ_T0048644.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 94358158 95469558 - MGP_LPJ_P0048644 Nrxn1 protein_coding protein_coding MGP_LPJ_T0048645.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 94358174 94793698 - MGP_LPJ_P0048645 Nrxn1 protein_coding protein_coding MGP_LPJ_T0048646.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 94358174 95473348 - MGP_LPJ_P0048646 Nrxn1 protein_coding protein_coding MGP_LPJ_T0048647.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 94358601 94536186 - MGP_LPJ_P0048647 Nrxn1 protein_coding protein_coding MGP_LPJ_T0048648.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 94489780 94683263 - Nrxn1 protein_coding processed_transcript MGP_LPJ_T0048649.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 94536051 95473418 - Nrxn1 protein_coding retained_intron MGP_LPJ_T0048650.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 94536051 94792574 - Nrxn1 protein_coding retained_intron MGP_LPJ_T0048651.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 94697610 94931181 - MGP_LPJ_P0048651 Nrxn1 protein_coding protein_coding MGP_LPJ_T0048652.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 94697851 94931330 - MGP_LPJ_P0048652 Nrxn1 protein_coding protein_coding MGP_LPJ_T0048653.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 94791550 94794321 - Nrxn1 protein_coding retained_intron MGP_LPJ_T0048654.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 94875197 95469315 - Nrxn1 protein_coding processed_transcript MGP_LPJ_T0048655.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 94901791 95051695 - MGP_LPJ_P0048655 Nrxn1 protein_coding unknown_likely_coding MGP_LPJ_T0048656.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 94932369 94972963 - MGP_LPJ_P0048656 Nrxn1 protein_coding protein_coding MGP_LPJ_T0048657.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 94932647 95047797 - MGP_LPJ_P0048657 Nrxn1 protein_coding protein_coding MGP_LPJ_T0048658.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 94962830 94972766 - Nrxn1 protein_coding retained_intron MGP_LPJ_T0048659.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 95046952 95473386 - Nrxn1 protein_coding retained_intron MGP_LPJ_T0048660.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 95050196 95473406 - Nrxn1 protein_coding retained_intron MGP_LPJ_T0048661.1 MGP_LPJ_G0024027.1 mouse_genomes_project 17 95466297 95473368 - Nrxn1 protein_coding retained_intron MGP_LPJ_T0046230.1 MGP_LPJ_G0023317.1 mouse_genomes_project 17 26412342 26413838 - MGP_LPJ_P0046230 Cuta protein_coding protein_coding MGP_LPJ_T0046231.1 MGP_LPJ_G0023317.1 mouse_genomes_project 17 26412342 26413848 - MGP_LPJ_P0046231 Cuta protein_coding protein_coding MGP_LPJ_T0003742.1 MGP_LPJ_G0003374.1 mouse_genomes_project 17 27221131 27222652 + Gm15420 antisense antisense MGP_LPJ_T0006914.1 MGP_LPJ_G0005696.1 mouse_genomes_project 17 13058350 13067549 - Gm5091 lincRNA lincRNA MGP_LPJ_T0011437.1 MGP_LPJ_G0009555.1 mouse_genomes_project 17 28111480 28111768 + Gm22146 misc_RNA misc_RNA MGP_LPJ_T0048318.1 MGP_LPJ_G0023910.1 mouse_genomes_project 17 74099676 74100168 + MGP_LPJ_P0048318 Gm16519 protein_coding protein_coding MGP_LPJ_T0013213.1 MGP_LPJ_G0011304.1 mouse_genomes_project 17 27378933 27380434 + processed_pseudogene processed_pseudogene MGP_LPJ_T0045589.1 MGP_LPJ_G0023149.1 mouse_genomes_project 17 20492447 20506527 + MGP_LPJ_P0045589 Zfp229 protein_coding protein_coding MGP_LPJ_T0045590.1 MGP_LPJ_G0023149.1 mouse_genomes_project 17 20495265 20497667 + Zfp229 protein_coding processed_transcript MGP_LPJ_T0045591.1 MGP_LPJ_G0023149.1 mouse_genomes_project 17 20495298 20496503 + Zfp229 protein_coding processed_transcript MGP_LPJ_T0045592.1 MGP_LPJ_G0023149.1 mouse_genomes_project 17 20495309 20510434 + MGP_LPJ_P0045592 Zfp229 protein_coding protein_coding MGP_LPJ_T0045593.1 MGP_LPJ_G0023149.1 mouse_genomes_project 17 20495309 20532017 + MGP_LPJ_P0045593 Zfp229 protein_coding protein_coding MGP_LPJ_T0045594.1 MGP_LPJ_G0023149.1 mouse_genomes_project 17 20497497 20510435 + MGP_LPJ_P0045594 Zfp229 protein_coding protein_coding MGP_LPJ_T0047849.1 MGP_LPJ_G0023756.1 mouse_genomes_project 17 49323680 49350695 - MGP_LPJ_P0047849 Taf8 protein_coding protein_coding MGP_LPJ_T0048074.1 MGP_LPJ_G0023823.1 mouse_genomes_project 17 58471586 58473850 - MGP_LPJ_P0048074 Lrg1 protein_coding protein_coding MGP_LPJ_T0046210.1 MGP_LPJ_G0023311.1 mouse_genomes_project 17 26169491 26231101 + MGP_LPJ_P0046210 Crebrf protein_coding protein_coding MGP_LPJ_T0046211.1 MGP_LPJ_G0023311.1 mouse_genomes_project 17 26169496 26196795 + MGP_LPJ_P0046211 Crebrf protein_coding protein_coding MGP_LPJ_T0046212.1 MGP_LPJ_G0023311.1 mouse_genomes_project 17 26169551 26217598 + MGP_LPJ_P0046212 Crebrf protein_coding protein_coding MGP_LPJ_T0046213.1 MGP_LPJ_G0023311.1 mouse_genomes_project 17 26169565 26215637 + MGP_LPJ_P0046213 Crebrf protein_coding protein_coding MGP_LPJ_T0046214.1 MGP_LPJ_G0023311.1 mouse_genomes_project 17 26196819 26211526 + Crebrf protein_coding retained_intron MGP_LPJ_T0046215.1 MGP_LPJ_G0023311.1 mouse_genomes_project 17 26211040 26213258 + Crebrf protein_coding retained_intron MGP_LPJ_T0011447.1 MGP_LPJ_G0009565.1 mouse_genomes_project 17 50728108 50728366 - Gm23642 misc_RNA misc_RNA MGP_LPJ_T0047557.1 MGP_LPJ_G0023662.1 mouse_genomes_project 17 41708597 41736199 - MGP_LPJ_P0047557 Crisp1 protein_coding protein_coding MGP_LPJ_T0048385.1 MGP_LPJ_G0023930.1 mouse_genomes_project 17 77142737 77170041 + MGP_LPJ_P0048385 Ehd3 protein_coding protein_coding MGP_LPJ_T0048441.1 MGP_LPJ_G0023949.1 mouse_genomes_project 17 82436258 82518303 - MGP_LPJ_P0048441 Heatr5b protein_coding protein_coding MGP_LPJ_T0013238.1 MGP_LPJ_G0011329.1 mouse_genomes_project 17 39438414 39438544 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101923.1 MGP_LPJ_G0039960.1 mouse_genomes_project 17 17621400 17652817 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0045951.1 MGP_LPJ_G0023250.1 mouse_genomes_project 17 24566051 24575142 + MGP_LPJ_P0045951 Gm5819 protein_coding protein_coding MGP_LPJ_T0098511.1 MGP_LPJ_G0036786.1 mouse_genomes_project 17 76956530 76961158 - D630014O11Rik sense_intronic sense_intronic MGP_LPJ_T0047515.1 MGP_LPJ_G0023626.1 mouse_genomes_project 17 38577564 38578564 - MGP_LPJ_P0047515 Olfr114 protein_coding protein_coding MGP_LPJ_T0047571.1 MGP_LPJ_G0023672.1 mouse_genomes_project 17 42354221 42363415 - MGP_LPJ_P0047571 Glyatl3 protein_coding protein_coding MGP_LPJ_T0046537.1 MGP_LPJ_G0023388.1 mouse_genomes_project 17 31082499 31086921 - MGP_LPJ_P0046537 Tff3 protein_coding protein_coding MGP_LPJ_T0047552.1 MGP_LPJ_G0023657.1 mouse_genomes_project 17 40431393 40849107 + MGP_LPJ_P0047552 protein_coding protein_coding MGP_LPJ_T0045457.1 MGP_LPJ_G0023078.1 mouse_genomes_project 17 12747020 12763273 - MGP_LPJ_P0045457 Phf10 protein_coding protein_coding MGP_LPJ_T0045458.1 MGP_LPJ_G0023078.1 mouse_genomes_project 17 12747025 12748840 - Phf10 protein_coding retained_intron MGP_LPJ_T0045459.1 MGP_LPJ_G0023078.1 mouse_genomes_project 17 12748577 12754718 - Phf10 protein_coding retained_intron MGP_LPJ_T0045460.1 MGP_LPJ_G0023078.1 mouse_genomes_project 17 12749749 12763273 - MGP_LPJ_P0045460 Phf10 protein_coding nonsense_mediated_decay MGP_LPJ_T0045461.1 MGP_LPJ_G0023078.1 mouse_genomes_project 17 12757710 12761527 - Phf10 protein_coding retained_intron MGP_LPJ_T0046787.1 MGP_LPJ_G0023451.1 mouse_genomes_project 17 34139889 34145247 + MGP_LPJ_P0046787 Tapbp protein_coding protein_coding MGP_LPJ_T0046790.1 MGP_LPJ_G0023451.1 mouse_genomes_project 17 34144163 34154067 + MGP_LPJ_P0046790 Tapbp protein_coding protein_coding MGP_LPJ_T0046791.1 MGP_LPJ_G0023451.1 mouse_genomes_project 17 34144343 34145207 + Tapbp protein_coding retained_intron MGP_LPJ_T0046792.1 MGP_LPJ_G0023451.1 mouse_genomes_project 17 34145359 34150976 + Tapbp protein_coding processed_transcript MGP_LPJ_T0046793.1 MGP_LPJ_G0023451.1 mouse_genomes_project 17 34150896 34153056 + Tapbp protein_coding retained_intron MGP_LPJ_T0013252.1 MGP_LPJ_G0011343.1 mouse_genomes_project 17 56269320 56270281 + processed_pseudogene processed_pseudogene MGP_LPJ_T0045344.1 MGP_LPJ_G0023043.1 mouse_genomes_project 17 5830151 6249334 + MGP_LPJ_P0045344 Pde10a protein_coding protein_coding MGP_LPJ_T0045345.1 MGP_LPJ_G0023043.1 mouse_genomes_project 17 5831490 6310427 + MGP_LPJ_P0045345 Pde10a protein_coding protein_coding MGP_LPJ_T0045348.1 MGP_LPJ_G0023043.1 mouse_genomes_project 17 6121630 6226032 + Pde10a protein_coding retained_intron MGP_LPJ_T0045349.1 MGP_LPJ_G0023043.1 mouse_genomes_project 17 6121716 6314579 + MGP_LPJ_P0045349 Pde10a protein_coding nonsense_mediated_decay MGP_LPJ_T0045350.1 MGP_LPJ_G0023043.1 mouse_genomes_project 17 6122016 6309587 + MGP_LPJ_P0045350 Pde10a protein_coding protein_coding MGP_LPJ_T0045351.1 MGP_LPJ_G0023043.1 mouse_genomes_project 17 6174651 6310331 + MGP_LPJ_P0045351 Pde10a protein_coding protein_coding MGP_LPJ_T0045352.1 MGP_LPJ_G0023043.1 mouse_genomes_project 17 6220145 6256450 + Pde10a protein_coding processed_transcript MGP_LPJ_T0045353.1 MGP_LPJ_G0023043.1 mouse_genomes_project 17 6250060 6312221 + MGP_LPJ_P0045353 Pde10a protein_coding protein_coding MGP_LPJ_T0047612.1 MGP_LPJ_G0023692.1 mouse_genomes_project 17 45777143 45878067 + MGP_LPJ_P0047612 Clic5 protein_coding protein_coding MGP_LPJ_T0006957.1 MGP_LPJ_G0005732.1 mouse_genomes_project 17 36307545 36329651 - Gm20442 lincRNA lincRNA MGP_LPJ_T0048553.1 MGP_LPJ_G0023999.1 mouse_genomes_project 17 89624657 89639590 + MGP_LPJ_P0048553 Six3 protein_coding protein_coding MGP_LPJ_T0048554.1 MGP_LPJ_G0023999.1 mouse_genomes_project 17 89635232 89640558 + MGP_LPJ_P0048554 Six3 protein_coding protein_coding MGP_LPJ_T0048555.1 MGP_LPJ_G0023999.1 mouse_genomes_project 17 89635411 89643687 + MGP_LPJ_P0048555 Six3 protein_coding protein_coding MGP_LPJ_T0010219.1 MGP_LPJ_G0008337.1 mouse_genomes_project 17 35280241 35280305 - Mir6972 miRNA miRNA MGP_LPJ_T0006945.1 MGP_LPJ_G0005720.1 mouse_genomes_project 17 32151724 32183100 + Gm17276 lincRNA lincRNA MGP_LPJ_T0047232.1 MGP_LPJ_G0023546.1 mouse_genomes_project 17 35855495 35859028 + MGP_LPJ_P0047232 H2-Q2 protein_coding protein_coding MGP_LPJ_T0047233.1 MGP_LPJ_G0023546.1 mouse_genomes_project 17 35855984 35859102 + MGP_LPJ_P0047233 H2-Q2 protein_coding unknown_likely_coding MGP_LPJ_T0047234.1 MGP_LPJ_G0023546.1 mouse_genomes_project 17 35856005 35859102 + MGP_LPJ_P0047234 H2-Q2 protein_coding unknown_likely_coding MGP_LPJ_T0013197.1 MGP_LPJ_G0011288.1 mouse_genomes_project 17 6082188 6082744 - processed_pseudogene processed_pseudogene MGP_LPJ_T0045618.1 MGP_LPJ_G0023161.1 mouse_genomes_project 17 21946203 21970545 - MGP_LPJ_P0045618 Zfp945 protein_coding protein_coding MGP_LPJ_T0045619.1 MGP_LPJ_G0023161.1 mouse_genomes_project 17 21948529 21965125 - Zfp945 protein_coding retained_intron MGP_LPJ_T0045620.1 MGP_LPJ_G0023161.1 mouse_genomes_project 17 21948529 21970545 - MGP_LPJ_P0045620 Zfp945 protein_coding protein_coding MGP_LPJ_T0045621.1 MGP_LPJ_G0023161.1 mouse_genomes_project 17 21951952 21970514 - MGP_LPJ_P0045621 Zfp945 protein_coding protein_coding MGP_LPJ_T0045622.1 MGP_LPJ_G0023161.1 mouse_genomes_project 17 21965132 21970545 - Zfp945 protein_coding retained_intron MGP_LPJ_T0048322.1 MGP_LPJ_G0023912.1 mouse_genomes_project 17 74174958 74184813 - MGP_LPJ_P0048322 Myl12a protein_coding protein_coding MGP_LPJ_T0048323.1 MGP_LPJ_G0023912.1 mouse_genomes_project 17 74175597 74184424 - Myl12a protein_coding retained_intron MGP_LPJ_T0048324.1 MGP_LPJ_G0023912.1 mouse_genomes_project 17 74175597 74180271 - MGP_LPJ_P0048324 Myl12a protein_coding protein_coding MGP_LPJ_T0048325.1 MGP_LPJ_G0023912.1 mouse_genomes_project 17 74175852 74185137 - MGP_LPJ_P0048325 Myl12a protein_coding protein_coding MGP_LPJ_T0048326.1 MGP_LPJ_G0023912.1 mouse_genomes_project 17 74177438 74184446 - MGP_LPJ_P0048326 Myl12a protein_coding protein_coding MGP_LPJ_T0048327.1 MGP_LPJ_G0023912.1 mouse_genomes_project 17 74177689 74184419 - Myl12a protein_coding retained_intron MGP_LPJ_T0048328.1 MGP_LPJ_G0023912.1 mouse_genomes_project 17 74178010 74184276 - MGP_LPJ_P0048328 Myl12a protein_coding protein_coding MGP_LPJ_T0101290.1 MGP_LPJ_G0039518.1 mouse_genomes_project 17 92384666 92390161 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101291.1 MGP_LPJ_G0039518.1 mouse_genomes_project 17 92389869 92390268 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0048192.1 MGP_LPJ_G0023873.1 mouse_genomes_project 17 59948660 59991704 - MGP_LPJ_P0048192 Vmn2r120 protein_coding protein_coding MGP_LPJ_T0047556.1 MGP_LPJ_G0023661.1 mouse_genomes_project 17 41625445 41647309 - MGP_LPJ_P0047556 Crisp3 protein_coding protein_coding MGP_LPJ_T0047546.1 MGP_LPJ_G0023651.1 mouse_genomes_project 17 39404786 39409531 - MGP_LPJ_P0047546 Esp36 protein_coding protein_coding MGP_LPJ_T0047785.1 MGP_LPJ_G0023729.1 mouse_genomes_project 17 48294239 48303447 - MGP_LPJ_P0047785 Srf protein_coding protein_coding MGP_LPJ_T0048572.1 MGP_LPJ_G0024009.1 mouse_genomes_project 17 91163751 91174024 + MGP_LPJ_P0048572 Cript protein_coding protein_coding MGP_LPJ_T0048573.1 MGP_LPJ_G0024009.1 mouse_genomes_project 17 91163811 91166433 + Cript protein_coding retained_intron MGP_LPJ_T0048574.1 MGP_LPJ_G0024009.1 mouse_genomes_project 17 91163812 91173686 + MGP_LPJ_P0048574 Cript protein_coding protein_coding MGP_LPJ_T0046407.1 MGP_LPJ_G0023356.1 mouse_genomes_project 17 28470106 28479161 + MGP_LPJ_P0046407 Mapk13 protein_coding protein_coding MGP_LPJ_T0046408.1 MGP_LPJ_G0023356.1 mouse_genomes_project 17 28470135 28478682 + Mapk13 protein_coding retained_intron MGP_LPJ_T0046409.1 MGP_LPJ_G0023356.1 mouse_genomes_project 17 28470148 28479009 + MGP_LPJ_P0046409 Mapk13 protein_coding nonsense_mediated_decay MGP_LPJ_T0046410.1 MGP_LPJ_G0023356.1 mouse_genomes_project 17 28470171 28478025 + Mapk13 protein_coding retained_intron MGP_LPJ_T0003769.1 MGP_LPJ_G0003394.1 mouse_genomes_project 17 36272174 36276671 + Gm4577 antisense antisense MGP_LPJ_T0047141.1 MGP_LPJ_G0023523.1 mouse_genomes_project 17 35536945 35540003 - MGP_LPJ_P0047141 Ly6g6d protein_coding protein_coding MGP_LPJ_T0047142.1 MGP_LPJ_G0023523.1 mouse_genomes_project 17 35536979 35543568 - Ly6g6d protein_coding processed_transcript MGP_LPJ_T0047143.1 MGP_LPJ_G0023523.1 mouse_genomes_project 17 35537047 35539967 - Ly6g6d protein_coding retained_intron MGP_LPJ_T0047144.1 MGP_LPJ_G0023523.1 mouse_genomes_project 17 35539417 35543568 - Ly6g6d protein_coding retained_intron MGP_LPJ_T0047145.1 MGP_LPJ_G0023523.1 mouse_genomes_project 17 35539715 35543559 - Ly6g6d protein_coding processed_transcript MGP_LPJ_T0045666.1 MGP_LPJ_G0023176.1 mouse_genomes_project 17 22909358 22913966 - MGP_LPJ_P0045666 Kremen2 protein_coding protein_coding MGP_LPJ_T0046313.1 MGP_LPJ_G0023338.1 mouse_genomes_project 17 27514757 27673073 + MGP_LPJ_P0046313 Anks1 protein_coding protein_coding MGP_LPJ_T0046314.1 MGP_LPJ_G0023338.1 mouse_genomes_project 17 27514789 27673070 + MGP_LPJ_P0046314 Anks1 protein_coding protein_coding MGP_LPJ_T0046315.1 MGP_LPJ_G0023338.1 mouse_genomes_project 17 27514789 27673070 + MGP_LPJ_P0046315 Anks1 protein_coding protein_coding MGP_LPJ_T0046316.1 MGP_LPJ_G0023338.1 mouse_genomes_project 17 27618122 27673072 + Anks1 protein_coding processed_transcript MGP_LPJ_T0047774.1 MGP_LPJ_G0023727.1 mouse_genomes_project 17 48241171 48243999 + MGP_LPJ_P0047774 Dnph1 protein_coding protein_coding MGP_LPJ_T0047632.1 MGP_LPJ_G0023696.1 mouse_genomes_project 17 47105188 47133358 - MGP_LPJ_P0047632 Spats1 protein_coding protein_coding MGP_LPJ_T0047729.1 MGP_LPJ_G0023716.1 mouse_genomes_project 17 47968057 47972192 - MGP_LPJ_P0047729 Polr1c protein_coding protein_coding MGP_LPJ_T0047730.1 MGP_LPJ_G0023716.1 mouse_genomes_project 17 47968238 47970711 - MGP_LPJ_P0047730 Polr1c protein_coding protein_coding MGP_LPJ_T0047731.1 MGP_LPJ_G0023716.1 mouse_genomes_project 17 47968661 47972070 - Polr1c protein_coding retained_intron MGP_LPJ_T0047732.1 MGP_LPJ_G0023716.1 mouse_genomes_project 17 47968750 47972106 - MGP_LPJ_P0047732 Polr1c protein_coding protein_coding MGP_LPJ_T0047733.1 MGP_LPJ_G0023716.1 mouse_genomes_project 17 47968972 47972106 - MGP_LPJ_P0047733 Polr1c protein_coding protein_coding MGP_LPJ_T0047734.1 MGP_LPJ_G0023716.1 mouse_genomes_project 17 47969070 47972106 - MGP_LPJ_P0047734 Polr1c protein_coding nonsense_mediated_decay MGP_LPJ_T0047735.1 MGP_LPJ_G0023716.1 mouse_genomes_project 17 47969399 47972105 - Polr1c protein_coding retained_intron MGP_LPJ_T0047736.1 MGP_LPJ_G0023716.1 mouse_genomes_project 17 47971436 47972106 - Polr1c protein_coding retained_intron MGP_LPJ_T0046051.1 MGP_LPJ_G0023277.1 mouse_genomes_project 17 25219066 25226720 + MGP_LPJ_P0046051 Wdr24 protein_coding protein_coding MGP_LPJ_T0046052.1 MGP_LPJ_G0023277.1 mouse_genomes_project 17 25219088 25226711 + Wdr24 protein_coding retained_intron MGP_LPJ_T0046053.1 MGP_LPJ_G0023277.1 mouse_genomes_project 17 25219969 25221111 + Wdr24 protein_coding processed_transcript MGP_LPJ_T0046054.1 MGP_LPJ_G0023277.1 mouse_genomes_project 17 25220101 25221784 + Wdr24 protein_coding retained_intron MGP_LPJ_T0048529.1 MGP_LPJ_G0023988.1 mouse_genomes_project 17 88085277 88089314 - MGP_LPJ_P0048529 Zfp36l2 protein_coding protein_coding MGP_LPJ_T0047341.1 MGP_LPJ_G0023568.1 mouse_genomes_project 17 36489053 36501534 - MGP_LPJ_P0047341 Atat1 protein_coding protein_coding MGP_LPJ_T0047342.1 MGP_LPJ_G0023568.1 mouse_genomes_project 17 36489067 36501505 - MGP_LPJ_P0047342 Atat1 protein_coding protein_coding MGP_LPJ_T0047343.1 MGP_LPJ_G0023568.1 mouse_genomes_project 17 36489070 36501516 - MGP_LPJ_P0047343 Atat1 protein_coding protein_coding MGP_LPJ_T0047344.1 MGP_LPJ_G0023568.1 mouse_genomes_project 17 36489073 36490041 - Atat1 protein_coding retained_intron MGP_LPJ_T0047345.1 MGP_LPJ_G0023568.1 mouse_genomes_project 17 36489340 36500420 - MGP_LPJ_P0047345 Atat1 protein_coding nonsense_mediated_decay MGP_LPJ_T0047346.1 MGP_LPJ_G0023568.1 mouse_genomes_project 17 36491269 36501504 - MGP_LPJ_P0047346 Atat1 protein_coding protein_coding MGP_LPJ_T0047347.1 MGP_LPJ_G0023568.1 mouse_genomes_project 17 36491304 36501504 - MGP_LPJ_P0047347 Atat1 protein_coding protein_coding MGP_LPJ_T0047348.1 MGP_LPJ_G0023568.1 mouse_genomes_project 17 36491947 36495785 - MGP_LPJ_P0047348 Atat1 protein_coding protein_coding MGP_LPJ_T0047349.1 MGP_LPJ_G0023568.1 mouse_genomes_project 17 36493438 36500894 - Atat1 protein_coding retained_intron MGP_LPJ_T0047350.1 MGP_LPJ_G0023568.1 mouse_genomes_project 17 36493455 36501032 - Atat1 protein_coding processed_transcript MGP_LPJ_T0047351.1 MGP_LPJ_G0023568.1 mouse_genomes_project 17 36493459 36500498 - Atat1 protein_coding retained_intron MGP_LPJ_T0047352.1 MGP_LPJ_G0023568.1 mouse_genomes_project 17 36493492 36501085 - MGP_LPJ_P0047352 Atat1 protein_coding protein_coding MGP_LPJ_T0047353.1 MGP_LPJ_G0023568.1 mouse_genomes_project 17 36494788 36501198 - Atat1 protein_coding retained_intron MGP_LPJ_T0047354.1 MGP_LPJ_G0023568.1 mouse_genomes_project 17 36499423 36501504 - Atat1 protein_coding processed_transcript MGP_LPJ_T0047355.1 MGP_LPJ_G0023568.1 mouse_genomes_project 17 36500042 36501490 - MGP_LPJ_P0047355 Atat1 protein_coding nonsense_mediated_decay MGP_LPJ_T0047356.1 MGP_LPJ_G0023568.1 mouse_genomes_project 17 36500389 36501468 - Atat1 protein_coding retained_intron MGP_LPJ_T0013277.1 MGP_LPJ_G0011368.1 mouse_genomes_project 17 94908694 94909029 - processed_pseudogene processed_pseudogene MGP_LPJ_T0001011.1 MGP_LPJ_G0000937.1 mouse_genomes_project 17 8709098 8711942 - TEC TEC MGP_LPJ_T0047564.1 MGP_LPJ_G0023669.1 mouse_genomes_project 17 42214228 42242963 - MGP_LPJ_P0047564 Crisp2 protein_coding protein_coding MGP_LPJ_T0047565.1 MGP_LPJ_G0023669.1 mouse_genomes_project 17 42231903 42242994 - MGP_LPJ_P0047565 Crisp2 protein_coding protein_coding MGP_LPJ_T0047566.1 MGP_LPJ_G0023669.1 mouse_genomes_project 17 42233610 42242924 - MGP_LPJ_P0047566 Crisp2 protein_coding protein_coding MGP_LPJ_T0047567.1 MGP_LPJ_G0023669.1 mouse_genomes_project 17 42233686 42242915 - MGP_LPJ_P0047567 Crisp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0047568.1 MGP_LPJ_G0023669.1 mouse_genomes_project 17 42242102 42249454 - Crisp2 protein_coding processed_transcript MGP_LPJ_T0001027.1 MGP_LPJ_G0000952.1 mouse_genomes_project 17 74558067 74560854 - TEC TEC MGP_LPJ_T0013229.1 MGP_LPJ_G0011320.1 mouse_genomes_project 17 38711390 38711744 - processed_pseudogene processed_pseudogene MGP_LPJ_T0047805.1 MGP_LPJ_G0023738.1 mouse_genomes_project 17 48475118 48489239 + Pex6 protein_coding retained_intron MGP_LPJ_T0047806.1 MGP_LPJ_G0023738.1 mouse_genomes_project 17 48475118 48489239 + MGP_LPJ_P0047806 Pex6 protein_coding protein_coding MGP_LPJ_T0047807.1 MGP_LPJ_G0023738.1 mouse_genomes_project 17 48475131 48481190 + Pex6 protein_coding processed_transcript MGP_LPJ_T0047808.1 MGP_LPJ_G0023738.1 mouse_genomes_project 17 48483942 48485486 + Pex6 protein_coding retained_intron MGP_LPJ_T0046132.1 MGP_LPJ_G0023292.1 mouse_genomes_project 17 25361516 25393221 - MGP_LPJ_P0046132 Capn15 protein_coding unknown_likely_coding MGP_LPJ_T0046133.1 MGP_LPJ_G0023292.1 mouse_genomes_project 17 25362710 25393212 - MGP_LPJ_P0046133 Capn15 protein_coding protein_coding MGP_LPJ_T0045657.1 MGP_LPJ_G0023171.1 mouse_genomes_project 17 22852827 22855914 + MGP_LPJ_P0045657 Cldn6 protein_coding protein_coding MGP_LPJ_T0010211.1 MGP_LPJ_G0008329.1 mouse_genomes_project 17 30915461 30915559 + Gm24026 miRNA miRNA MGP_LPJ_T0045699.1 MGP_LPJ_G0023188.1 mouse_genomes_project 17 23195853 23196671 + MGP_LPJ_P0045699 protein_coding protein_coding MGP_LPJ_T0100489.1 MGP_LPJ_G0038752.1 mouse_genomes_project 17 91194920 91195052 - Gm24648 snoRNA snoRNA MGP_LPJ_T0047553.1 MGP_LPJ_G0023658.1 mouse_genomes_project 17 40431393 40849936 + MGP_LPJ_P0047553 protein_coding protein_coding MGP_LPJ_T0013279.1 MGP_LPJ_G0011370.1 mouse_genomes_project 17 96080377 96081604 + processed_pseudogene processed_pseudogene MGP_LPJ_T0048046.1 MGP_LPJ_G0023812.1 mouse_genomes_project 17 58304274 58313026 + MGP_LPJ_P0048046 Ccdc94 protein_coding protein_coding MGP_LPJ_T0047439.1 MGP_LPJ_G0023593.1 mouse_genomes_project 17 37781325 37795808 + MGP_LPJ_P0047439 Trim31 protein_coding protein_coding MGP_LPJ_T0046310.1 MGP_LPJ_G0023337.1 mouse_genomes_project 17 27506542 27514660 - MGP_LPJ_P0046310 Taf11 protein_coding protein_coding MGP_LPJ_T0046311.1 MGP_LPJ_G0023337.1 mouse_genomes_project 17 27506548 27513142 - MGP_LPJ_P0046311 Taf11 protein_coding protein_coding MGP_LPJ_T0046312.1 MGP_LPJ_G0023337.1 mouse_genomes_project 17 27507082 27508695 - Taf11 protein_coding processed_transcript MGP_LPJ_T0047418.1 MGP_LPJ_G0023586.1 mouse_genomes_project 17 37650708 37696895 + MGP_LPJ_P0047418 H2-M10.5 protein_coding protein_coding MGP_LPJ_T0006928.1 MGP_LPJ_G0005708.1 mouse_genomes_project 17 26321299 26363521 + Gm20468 lincRNA lincRNA MGP_LPJ_T0006931.1 MGP_LPJ_G0005711.1 mouse_genomes_project 17 27329709 27335889 + Gm15458 lincRNA lincRNA MGP_LPJ_T0101953.1 MGP_LPJ_G0039990.1 mouse_genomes_project 17 35147163 35148559 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0047217.1 MGP_LPJ_G0023542.1 mouse_genomes_project 17 35714469 35719577 + Atp6v1g2 protein_coding retained_intron MGP_LPJ_T0047218.1 MGP_LPJ_G0023542.1 mouse_genomes_project 17 35715897 35718615 + MGP_LPJ_P0047218 Atp6v1g2 protein_coding protein_coding MGP_LPJ_T0047219.1 MGP_LPJ_G0023542.1 mouse_genomes_project 17 35716687 35718714 + MGP_LPJ_P0047219 Atp6v1g2 protein_coding protein_coding MGP_LPJ_T0047220.1 MGP_LPJ_G0023542.1 mouse_genomes_project 17 35716701 35718883 + Atp6v1g2 protein_coding retained_intron MGP_LPJ_T0047221.1 MGP_LPJ_G0023542.1 mouse_genomes_project 17 35717371 35719577 + MGP_LPJ_P0047221 Atp6v1g2 protein_coding protein_coding MGP_LPJ_T0047222.1 MGP_LPJ_G0023542.1 mouse_genomes_project 17 35717465 35718777 + Atp6v1g2 protein_coding retained_intron MGP_LPJ_T0047574.1 MGP_LPJ_G0023675.1 mouse_genomes_project 17 43794352 44007318 + MGP_LPJ_P0047574 Ptchd4 protein_coding protein_coding MGP_LPJ_T0048472.1 MGP_LPJ_G0023963.1 mouse_genomes_project 17 83574472 83623712 - MGP_LPJ_P0048472 Atl2 protein_coding protein_coding MGP_LPJ_T0048473.1 MGP_LPJ_G0023963.1 mouse_genomes_project 17 83574479 83623714 - MGP_LPJ_P0048473 Atl2 protein_coding protein_coding MGP_LPJ_T0048075.1 MGP_LPJ_G0023824.1 mouse_genomes_project 17 58474988 58492294 - MGP_LPJ_P0048075 Sema6b protein_coding protein_coding MGP_LPJ_T0048076.1 MGP_LPJ_G0023824.1 mouse_genomes_project 17 58474988 58485769 - MGP_LPJ_P0048076 Sema6b protein_coding protein_coding MGP_LPJ_T0047570.1 MGP_LPJ_G0023671.1 mouse_genomes_project 17 42321197 42326263 - MGP_LPJ_P0047570 9130008F23Rik protein_coding protein_coding MGP_LPJ_T0010194.1 MGP_LPJ_G0008312.1 mouse_genomes_project 17 23904403 23904497 + Gm24589 miRNA miRNA MGP_LPJ_T0010205.1 MGP_LPJ_G0008323.1 mouse_genomes_project 17 26863944 26864020 + Mir7216 miRNA miRNA MGP_LPJ_T0045287.1 MGP_LPJ_G0023021.1 mouse_genomes_project 17 4232397 4277403 - MGP_LPJ_P0045287 protein_coding protein_coding MGP_LPJ_T0046650.1 MGP_LPJ_G0023413.1 mouse_genomes_project 17 32524897 32549847 + MGP_LPJ_P0046650 Cyp4f39 protein_coding protein_coding MGP_LPJ_T0098194.1 MGP_LPJ_G0036475.1 mouse_genomes_project 17 3456146 3456268 + n-R5s26 rRNA rRNA MGP_LPJ_T0047498.1 MGP_LPJ_G0023613.1 mouse_genomes_project 17 38209609 38213896 + MGP_LPJ_P0047498 H2-M3 protein_coding protein_coding MGP_LPJ_T0047499.1 MGP_LPJ_G0023613.1 mouse_genomes_project 17 38209684 38213906 + MGP_LPJ_P0047499 H2-M3 protein_coding unknown_likely_coding MGP_LPJ_T0047119.1 MGP_LPJ_G0023518.1 mouse_genomes_project 17 35489900 35491164 - Msh5 protein_coding processed_transcript MGP_LPJ_T0047120.1 MGP_LPJ_G0023518.1 mouse_genomes_project 17 35489900 35509415 - MGP_LPJ_P0047120 Msh5 protein_coding protein_coding MGP_LPJ_T0047121.1 MGP_LPJ_G0023518.1 mouse_genomes_project 17 35489900 35509505 - MGP_LPJ_P0047121 Msh5 protein_coding protein_coding MGP_LPJ_T0047122.1 MGP_LPJ_G0023518.1 mouse_genomes_project 17 35489904 35494587 - MGP_LPJ_P0047122 Msh5 protein_coding nonsense_mediated_decay MGP_LPJ_T0047123.1 MGP_LPJ_G0023518.1 mouse_genomes_project 17 35489978 35509336 - MGP_LPJ_P0047123 Msh5 protein_coding nonsense_mediated_decay MGP_LPJ_T0047124.1 MGP_LPJ_G0023518.1 mouse_genomes_project 17 35489978 35509336 - MGP_LPJ_P0047124 Msh5 protein_coding nonsense_mediated_decay MGP_LPJ_T0047125.1 MGP_LPJ_G0023518.1 mouse_genomes_project 17 35499970 35509524 - MGP_LPJ_P0047125 Msh5 protein_coding nonsense_mediated_decay MGP_LPJ_T0047126.1 MGP_LPJ_G0023518.1 mouse_genomes_project 17 35502023 35506561 - Msh5 protein_coding retained_intron MGP_LPJ_T0047127.1 MGP_LPJ_G0023518.1 mouse_genomes_project 17 35502023 35509319 - Msh5 protein_coding retained_intron MGP_LPJ_T0047128.1 MGP_LPJ_G0023518.1 mouse_genomes_project 17 35506759 35508910 - Msh5 protein_coding retained_intron MGP_LPJ_T0047129.1 MGP_LPJ_G0023518.1 mouse_genomes_project 17 35506768 35507805 - Msh5 protein_coding retained_intron MGP_LPJ_T0047130.1 MGP_LPJ_G0023518.1 mouse_genomes_project 17 35506893 35509314 - MGP_LPJ_P0047130 Msh5 protein_coding nonsense_mediated_decay MGP_LPJ_T0046585.1 MGP_LPJ_G0023399.1 mouse_genomes_project 17 31624308 31648760 - MGP_LPJ_P0046585 Cbs protein_coding protein_coding MGP_LPJ_T0046586.1 MGP_LPJ_G0023399.1 mouse_genomes_project 17 31624325 31648726 - MGP_LPJ_P0046586 Cbs protein_coding protein_coding MGP_LPJ_T0046587.1 MGP_LPJ_G0023399.1 mouse_genomes_project 17 31624326 31648726 - MGP_LPJ_P0046587 Cbs protein_coding protein_coding MGP_LPJ_T0046588.1 MGP_LPJ_G0023399.1 mouse_genomes_project 17 31628853 31629562 - Cbs protein_coding retained_intron MGP_LPJ_T0046589.1 MGP_LPJ_G0023399.1 mouse_genomes_project 17 31632670 31637935 - Cbs protein_coding processed_transcript MGP_LPJ_T0046590.1 MGP_LPJ_G0023399.1 mouse_genomes_project 17 31633195 31634784 - Cbs protein_coding processed_transcript MGP_LPJ_T0046591.1 MGP_LPJ_G0023399.1 mouse_genomes_project 17 31636806 31648351 - MGP_LPJ_P0046591 Cbs protein_coding protein_coding MGP_LPJ_T0046592.1 MGP_LPJ_G0023399.1 mouse_genomes_project 17 31636860 31648210 - MGP_LPJ_P0046592 Cbs protein_coding protein_coding MGP_LPJ_T0046593.1 MGP_LPJ_G0023399.1 mouse_genomes_project 17 31639271 31648210 - MGP_LPJ_P0046593 Cbs protein_coding protein_coding MGP_LPJ_T0011441.1 MGP_LPJ_G0009559.1 mouse_genomes_project 17 37004897 37005215 - Gm22453 misc_RNA misc_RNA MGP_LPJ_T0003801.1 MGP_LPJ_G0003419.1 mouse_genomes_project 17 90357749 90359767 - 2010106C02Rik antisense antisense MGP_LPJ_T0046904.1 MGP_LPJ_G0023473.1 mouse_genomes_project 17 34469314 34473227 + MGP_LPJ_P0046904 Psmb8 protein_coding protein_coding MGP_LPJ_T0046905.1 MGP_LPJ_G0023473.1 mouse_genomes_project 17 34469383 34473764 + MGP_LPJ_P0046905 Psmb8 protein_coding protein_coding MGP_LPJ_T0046906.1 MGP_LPJ_G0023473.1 mouse_genomes_project 17 34470203 34473734 + Psmb8 protein_coding retained_intron MGP_LPJ_T0046975.1 MGP_LPJ_G0023490.1 mouse_genomes_project 17 34950867 34953241 - MGP_LPJ_P0046975 Rnf5 protein_coding unknown_likely_coding MGP_LPJ_T0046976.1 MGP_LPJ_G0023490.1 mouse_genomes_project 17 34951081 34953144 - Rnf5 protein_coding retained_intron MGP_LPJ_T0046977.1 MGP_LPJ_G0023490.1 mouse_genomes_project 17 34951549 34953429 - Rnf5 protein_coding retained_intron MGP_LPJ_T0047440.1 MGP_LPJ_G0023594.1 mouse_genomes_project 17 37828731 37833794 + MGP_LPJ_P0047440 Rnf39 protein_coding protein_coding MGP_LPJ_T0047441.1 MGP_LPJ_G0023594.1 mouse_genomes_project 17 37828868 37831421 + MGP_LPJ_P0047441 Rnf39 protein_coding protein_coding MGP_LPJ_T0047442.1 MGP_LPJ_G0023594.1 mouse_genomes_project 17 37830883 37833094 + MGP_LPJ_P0047442 Rnf39 protein_coding protein_coding MGP_LPJ_T0101947.1 MGP_LPJ_G0039984.1 mouse_genomes_project 17 34338248 34339400 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0046832.1 MGP_LPJ_G0023459.1 mouse_genomes_project 17 34234084 34242330 - MGP_LPJ_P0046832 H2-K1 protein_coding protein_coding MGP_LPJ_T0046833.1 MGP_LPJ_G0023459.1 mouse_genomes_project 17 34234085 34242324 - H2-K1 protein_coding retained_intron MGP_LPJ_T0046834.1 MGP_LPJ_G0023459.1 mouse_genomes_project 17 34234106 34238632 - H2-K1 protein_coding retained_intron MGP_LPJ_T0046835.1 MGP_LPJ_G0023459.1 mouse_genomes_project 17 34234120 34242374 - MGP_LPJ_P0046835 H2-K1 protein_coding protein_coding MGP_LPJ_T0046837.1 MGP_LPJ_G0023459.1 mouse_genomes_project 17 34238241 34242301 - MGP_LPJ_P0046837 H2-K1 protein_coding protein_coding MGP_LPJ_T0045530.1 MGP_LPJ_G0023099.1 mouse_genomes_project 17 16019111 16020083 + MGP_LPJ_P0045530 Fpr-rs4 protein_coding protein_coding MGP_LPJ_T0045339.1 MGP_LPJ_G0023041.1 mouse_genomes_project 17 5632276 5635979 + MGP_LPJ_P0045339 Prr18 protein_coding protein_coding MGP_LPJ_T0045340.1 MGP_LPJ_G0023041.1 mouse_genomes_project 17 5632609 5635979 + MGP_LPJ_P0045340 Prr18 protein_coding protein_coding MGP_LPJ_T0010235.1 MGP_LPJ_G0008353.1 mouse_genomes_project 17 66135978 66136062 + Gm24813 miRNA miRNA MGP_LPJ_T0045628.1 MGP_LPJ_G0023164.1 mouse_genomes_project 17 22732702 22742666 - MGP_LPJ_P0045628 Zfp13 protein_coding protein_coding MGP_LPJ_T0045629.1 MGP_LPJ_G0023164.1 mouse_genomes_project 17 22732709 22760845 - MGP_LPJ_P0045629 Zfp13 protein_coding protein_coding MGP_LPJ_T0003764.1 MGP_LPJ_G0003389.1 mouse_genomes_project 17 34950918 34951344 + Gm20463 antisense antisense MGP_LPJ_T0045572.1 MGP_LPJ_G0023135.1 mouse_genomes_project 17 19944038 19945028 + MGP_LPJ_P0045572 Vmn1r234 protein_coding protein_coding MGP_LPJ_T0047562.1 MGP_LPJ_G0023667.1 mouse_genomes_project 17 42057013 42062899 + MGP_LPJ_P0047562 Esp3 protein_coding protein_coding MGP_LPJ_T0045557.1 MGP_LPJ_G0023126.1 mouse_genomes_project 17 19339112 19340009 + MGP_LPJ_P0045557 Vmn1r226 protein_coding protein_coding MGP_LPJ_T0003771.1 MGP_LPJ_G0003396.1 mouse_genomes_project 17 36488405 36503675 + Gm16279 antisense antisense MGP_LPJ_T0101932.1 MGP_LPJ_G0039969.1 mouse_genomes_project 17 19070019 19070623 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0048159.1 MGP_LPJ_G0023859.1 mouse_genomes_project 17 59457773 59466677 - MGP_LPJ_P0048159 Slc25a41 protein_coding protein_coding MGP_LPJ_T0048160.1 MGP_LPJ_G0023859.1 mouse_genomes_project 17 59457925 59466670 - MGP_LPJ_P0048160 Slc25a41 protein_coding protein_coding MGP_LPJ_T0046200.1 MGP_LPJ_G0023308.1 mouse_genomes_project 17 25993776 25995487 + MGP_LPJ_P0046200 Gm8225 protein_coding protein_coding MGP_LPJ_T0013228.1 MGP_LPJ_G0011319.1 mouse_genomes_project 17 38091016 38091613 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017532.1 MGP_LPJ_G0015270.1 mouse_genomes_project 17 51524459 51525763 - Gm20540 processed_transcript processed_transcript MGP_LPJ_T0006983.1 MGP_LPJ_G0005749.1 mouse_genomes_project 17 67345524 67388720 - AU016765 lincRNA lincRNA MGP_LPJ_T0006984.1 MGP_LPJ_G0005749.1 mouse_genomes_project 17 67345577 67388678 - AU016765 lincRNA lincRNA MGP_LPJ_T0006985.1 MGP_LPJ_G0005749.1 mouse_genomes_project 17 67345580 67388758 - AU016765 lincRNA lincRNA MGP_LPJ_T0006986.1 MGP_LPJ_G0005749.1 mouse_genomes_project 17 67345582 67388601 - AU016765 lincRNA lincRNA MGP_LPJ_T0048185.1 MGP_LPJ_G0023871.1 mouse_genomes_project 17 59735809 59789964 + MGP_LPJ_P0048185 Vav1 protein_coding protein_coding MGP_LPJ_T0048186.1 MGP_LPJ_G0023871.1 mouse_genomes_project 17 59735809 59790045 + MGP_LPJ_P0048186 Vav1 protein_coding protein_coding MGP_LPJ_T0048187.1 MGP_LPJ_G0023871.1 mouse_genomes_project 17 59735836 59789969 + MGP_LPJ_P0048187 Vav1 protein_coding protein_coding MGP_LPJ_T0048188.1 MGP_LPJ_G0023871.1 mouse_genomes_project 17 59763718 59767428 + Vav1 protein_coding retained_intron MGP_LPJ_T0048189.1 MGP_LPJ_G0023871.1 mouse_genomes_project 17 59773950 59789967 + Vav1 protein_coding processed_transcript MGP_LPJ_T0047511.1 MGP_LPJ_G0023623.1 mouse_genomes_project 17 38505727 38507982 + MGP_LPJ_P0047511 protein_coding protein_coding MGP_LPJ_T0048270.1 MGP_LPJ_G0023898.1 mouse_genomes_project 17 69486947 69529015 - MGP_LPJ_P0048270 Themis3 protein_coding protein_coding MGP_LPJ_T0046638.1 MGP_LPJ_G0023411.1 mouse_genomes_project 17 32446016 32458911 - MGP_LPJ_P0046638 Rasal3 protein_coding protein_coding MGP_LPJ_T0046639.1 MGP_LPJ_G0023411.1 mouse_genomes_project 17 32446018 32458887 - MGP_LPJ_P0046639 Rasal3 protein_coding nonsense_mediated_decay MGP_LPJ_T0046640.1 MGP_LPJ_G0023411.1 mouse_genomes_project 17 32446027 32458896 - Rasal3 protein_coding retained_intron MGP_LPJ_T0046641.1 MGP_LPJ_G0023411.1 mouse_genomes_project 17 32446274 32446866 - Rasal3 protein_coding retained_intron MGP_LPJ_T0046642.1 MGP_LPJ_G0023411.1 mouse_genomes_project 17 32446281 32458909 - MGP_LPJ_P0046642 Rasal3 protein_coding protein_coding MGP_LPJ_T0046643.1 MGP_LPJ_G0023411.1 mouse_genomes_project 17 32446330 32458865 - MGP_LPJ_P0046643 Rasal3 protein_coding protein_coding MGP_LPJ_T0046644.1 MGP_LPJ_G0023411.1 mouse_genomes_project 17 32447996 32449084 - Rasal3 protein_coding retained_intron MGP_LPJ_T0046645.1 MGP_LPJ_G0023411.1 mouse_genomes_project 17 32449280 32450729 - Rasal3 protein_coding retained_intron MGP_LPJ_T0046646.1 MGP_LPJ_G0023411.1 mouse_genomes_project 17 32450924 32452067 - Rasal3 protein_coding retained_intron MGP_LPJ_T0046647.1 MGP_LPJ_G0023411.1 mouse_genomes_project 17 32454135 32458909 - Rasal3 protein_coding retained_intron MGP_LPJ_T0011457.1 MGP_LPJ_G0009575.1 mouse_genomes_project 17 89632468 89632667 + Gm27502 misc_RNA misc_RNA MGP_LPJ_T0048399.1 MGP_LPJ_G0023940.1 mouse_genomes_project 17 77945023 78149263 + MGP_LPJ_P0048399 Birc6 protein_coding protein_coding MGP_LPJ_T0048400.1 MGP_LPJ_G0023940.1 mouse_genomes_project 17 77945196 78148424 + MGP_LPJ_P0048400 Birc6 protein_coding protein_coding MGP_LPJ_T0048401.1 MGP_LPJ_G0023940.1 mouse_genomes_project 17 77945196 78148424 + MGP_LPJ_P0048401 Birc6 protein_coding protein_coding MGP_LPJ_T0048402.1 MGP_LPJ_G0023940.1 mouse_genomes_project 17 77945196 78148424 + MGP_LPJ_P0048402 Birc6 protein_coding protein_coding MGP_LPJ_T0048403.1 MGP_LPJ_G0023940.1 mouse_genomes_project 17 77945250 77987064 + Birc6 protein_coding retained_intron MGP_LPJ_T0048404.1 MGP_LPJ_G0023940.1 mouse_genomes_project 17 77945280 78148424 + MGP_LPJ_P0048404 Birc6 protein_coding protein_coding MGP_LPJ_T0048405.1 MGP_LPJ_G0023940.1 mouse_genomes_project 17 77968092 77970993 + Birc6 protein_coding retained_intron MGP_LPJ_T0048406.1 MGP_LPJ_G0023940.1 mouse_genomes_project 17 77976984 77981052 + Birc6 protein_coding retained_intron MGP_LPJ_T0048407.1 MGP_LPJ_G0023940.1 mouse_genomes_project 17 77976995 77982769 + Birc6 protein_coding retained_intron MGP_LPJ_T0048408.1 MGP_LPJ_G0023940.1 mouse_genomes_project 17 77980679 77982916 + Birc6 protein_coding retained_intron MGP_LPJ_T0048409.1 MGP_LPJ_G0023940.1 mouse_genomes_project 17 77981008 77986008 + Birc6 protein_coding retained_intron MGP_LPJ_T0048410.1 MGP_LPJ_G0023940.1 mouse_genomes_project 17 78032492 78056786 + MGP_LPJ_P0048410 Birc6 protein_coding protein_coding MGP_LPJ_T0048411.1 MGP_LPJ_G0023940.1 mouse_genomes_project 17 78038881 78042083 + MGP_LPJ_P0048411 Birc6 protein_coding protein_coding MGP_LPJ_T0048412.1 MGP_LPJ_G0023940.1 mouse_genomes_project 17 78047407 78056785 + MGP_LPJ_P0048412 Birc6 protein_coding protein_coding MGP_LPJ_T0048413.1 MGP_LPJ_G0023940.1 mouse_genomes_project 17 78047776 78080678 + Birc6 protein_coding retained_intron MGP_LPJ_T0048414.1 MGP_LPJ_G0023940.1 mouse_genomes_project 17 78047806 78055588 + MGP_LPJ_P0048414 Birc6 protein_coding protein_coding MGP_LPJ_T0048415.1 MGP_LPJ_G0023940.1 mouse_genomes_project 17 78048569 78051871 + Birc6 protein_coding retained_intron MGP_LPJ_T0048416.1 MGP_LPJ_G0023940.1 mouse_genomes_project 17 78055219 78056785 + Birc6 protein_coding retained_intron MGP_LPJ_T0048417.1 MGP_LPJ_G0023940.1 mouse_genomes_project 17 78092436 78100409 + MGP_LPJ_P0048417 Birc6 protein_coding nonsense_mediated_decay MGP_LPJ_T0048418.1 MGP_LPJ_G0023940.1 mouse_genomes_project 17 78092446 78094271 + Birc6 protein_coding processed_transcript MGP_LPJ_T0048419.1 MGP_LPJ_G0023940.1 mouse_genomes_project 17 78094194 78149254 + MGP_LPJ_P0048419 Birc6 protein_coding nonsense_mediated_decay MGP_LPJ_T0048420.1 MGP_LPJ_G0023940.1 mouse_genomes_project 17 78100290 78110197 + Birc6 protein_coding retained_intron MGP_LPJ_T0048421.1 MGP_LPJ_G0023940.1 mouse_genomes_project 17 78111591 78126706 + Birc6 protein_coding retained_intron MGP_LPJ_T0048422.1 MGP_LPJ_G0023940.1 mouse_genomes_project 17 78143065 78148976 + Birc6 protein_coding retained_intron MGP_LPJ_T0011458.1 MGP_LPJ_G0009576.1 mouse_genomes_project 17 89633626 89633819 + Gm27427 misc_RNA misc_RNA MGP_LPJ_T0101961.1 MGP_LPJ_G0039998.1 mouse_genomes_project 17 36852638 36914084 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0046096.1 MGP_LPJ_G0023284.1 mouse_genomes_project 17 25261661 25267794 - MGP_LPJ_P0046096 Fam195a protein_coding protein_coding MGP_LPJ_T0045980.1 MGP_LPJ_G0023257.1 mouse_genomes_project 17 24669793 24673658 + MGP_LPJ_P0045980 Prss29 protein_coding protein_coding MGP_LPJ_T0046208.1 MGP_LPJ_G0023310.1 mouse_genomes_project 17 26130276 26153499 + MGP_LPJ_P0046208 Atp6v0e protein_coding protein_coding MGP_LPJ_T0046209.1 MGP_LPJ_G0023310.1 mouse_genomes_project 17 26130292 26151806 + MGP_LPJ_P0046209 Atp6v0e protein_coding protein_coding MGP_LPJ_T0048618.1 MGP_LPJ_G0024022.1 mouse_genomes_project 17 92820538 92881046 + MGP_LPJ_P0048618 Ppp1r21 protein_coding protein_coding MGP_LPJ_T0048619.1 MGP_LPJ_G0024022.1 mouse_genomes_project 17 92820636 92833660 + Ppp1r21 protein_coding retained_intron MGP_LPJ_T0048620.1 MGP_LPJ_G0024022.1 mouse_genomes_project 17 92854625 92858157 + Ppp1r21 protein_coding retained_intron MGP_LPJ_T0048621.1 MGP_LPJ_G0024022.1 mouse_genomes_project 17 92867729 92869978 + Ppp1r21 protein_coding retained_intron MGP_LPJ_T0048622.1 MGP_LPJ_G0024022.1 mouse_genomes_project 17 92867847 92871834 + Ppp1r21 protein_coding retained_intron MGP_LPJ_T0048623.1 MGP_LPJ_G0024022.1 mouse_genomes_project 17 92871383 92881044 + Ppp1r21 protein_coding retained_intron MGP_LPJ_T0048566.1 MGP_LPJ_G0024005.1 mouse_genomes_project 17 91051587 91056609 + MGP_LPJ_P0048566 Tmem247 protein_coding protein_coding MGP_LPJ_T0048567.1 MGP_LPJ_G0024005.1 mouse_genomes_project 17 91052650 91056616 + MGP_LPJ_P0048567 Tmem247 protein_coding protein_coding MGP_LPJ_T0045524.1 MGP_LPJ_G0023095.1 mouse_genomes_project 17 15876622 15884073 - MGP_LPJ_P0045524 Fpr1 protein_coding protein_coding MGP_LPJ_T0048369.1 MGP_LPJ_G0023922.1 mouse_genomes_project 17 74949524 74958866 - MGP_LPJ_P0048369 BC027072 protein_coding protein_coding MGP_LPJ_T0013216.1 MGP_LPJ_G0011307.1 mouse_genomes_project 17 34326061 34328462 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101974.1 MGP_LPJ_G0040011.1 mouse_genomes_project 17 37555050 37555479 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0048019.1 MGP_LPJ_G0023796.1 mouse_genomes_project 17 55651319 55721307 - MGP_LPJ_P0048019 Efhb protein_coding protein_coding MGP_LPJ_T0013239.1 MGP_LPJ_G0011330.1 mouse_genomes_project 17 39474310 39474991 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099245.1 MGP_LPJ_G0037508.1 mouse_genomes_project 17 98789282 98789391 - Gm22593 snRNA snRNA MGP_LPJ_T0006969.1 MGP_LPJ_G0005741.1 mouse_genomes_project 17 48214153 48598183 + lincRNA lincRNA MGP_LPJ_T0047516.1 MGP_LPJ_G0023627.1 mouse_genomes_project 17 38592476 38614013 - MGP_LPJ_P0047516 protein_coding protein_coding MGP_LPJ_T0047018.1 MGP_LPJ_G0023500.1 mouse_genomes_project 17 35258922 35261859 + MGP_LPJ_P0047018 Dxo protein_coding protein_coding MGP_LPJ_T0047019.1 MGP_LPJ_G0023500.1 mouse_genomes_project 17 35258922 35261906 + MGP_LPJ_P0047019 Dxo protein_coding protein_coding MGP_LPJ_T0047020.1 MGP_LPJ_G0023500.1 mouse_genomes_project 17 35258922 35261321 + MGP_LPJ_P0047020 Dxo protein_coding protein_coding MGP_LPJ_T0047021.1 MGP_LPJ_G0023500.1 mouse_genomes_project 17 35258985 35260263 + Dxo protein_coding retained_intron MGP_LPJ_T0047022.1 MGP_LPJ_G0023500.1 mouse_genomes_project 17 35259151 35259881 + MGP_LPJ_P0047022 Dxo protein_coding protein_coding MGP_LPJ_T0047023.1 MGP_LPJ_G0023500.1 mouse_genomes_project 17 35259302 35261810 + MGP_LPJ_P0047023 Dxo protein_coding protein_coding MGP_LPJ_T0047024.1 MGP_LPJ_G0023500.1 mouse_genomes_project 17 35259560 35261811 + MGP_LPJ_P0047024 Dxo protein_coding nonsense_mediated_decay MGP_LPJ_T0047025.1 MGP_LPJ_G0023500.1 mouse_genomes_project 17 35259896 35261356 + MGP_LPJ_P0047025 Dxo protein_coding nonsense_mediated_decay MGP_LPJ_T0047026.1 MGP_LPJ_G0023500.1 mouse_genomes_project 17 35260198 35261810 + MGP_LPJ_P0047026 Dxo protein_coding nonsense_mediated_decay MGP_LPJ_T0047027.1 MGP_LPJ_G0023500.1 mouse_genomes_project 17 35260227 35261810 + MGP_LPJ_P0047027 Dxo protein_coding protein_coding MGP_LPJ_T0047028.1 MGP_LPJ_G0023500.1 mouse_genomes_project 17 35260347 35261796 + MGP_LPJ_P0047028 Dxo protein_coding protein_coding MGP_LPJ_T0010222.1 MGP_LPJ_G0008340.1 mouse_genomes_project 17 35724884 35724945 + Mir6975 miRNA miRNA MGP_LPJ_T0046531.1 MGP_LPJ_G0023385.1 mouse_genomes_project 17 30844284 30882711 + MGP_LPJ_P0046531 Glp1r protein_coding protein_coding MGP_LPJ_T0003767.1 MGP_LPJ_G0003392.1 mouse_genomes_project 17 35807058 35811764 - antisense antisense MGP_LPJ_T0047011.1 MGP_LPJ_G0023497.1 mouse_genomes_project 17 35014422 35088412 + MGP_LPJ_P0047011 Tnxb protein_coding unknown_likely_coding MGP_LPJ_T0098195.1 MGP_LPJ_G0036476.1 mouse_genomes_project 17 31010801 31010929 + Gm25447 rRNA rRNA MGP_LPJ_T0047587.1 MGP_LPJ_G0023683.1 mouse_genomes_project 17 45024464 45055150 - MGP_LPJ_P0047587 Mep1a protein_coding protein_coding MGP_LPJ_T0047588.1 MGP_LPJ_G0023683.1 mouse_genomes_project 17 45050292 45052875 - Mep1a protein_coding processed_transcript MGP_LPJ_T0047589.1 MGP_LPJ_G0023683.1 mouse_genomes_project 17 45054636 45055126 - Mep1a protein_coding retained_intron MGP_LPJ_T0045627.1 MGP_LPJ_G0023163.1 mouse_genomes_project 17 22712353 22719758 - MGP_LPJ_P0045627 Zfp213 protein_coding protein_coding MGP_LPJ_T0046677.1 MGP_LPJ_G0023425.1 mouse_genomes_project 17 33079788 33091594 + MGP_LPJ_P0046677 Zfp472 protein_coding protein_coding MGP_LPJ_T0013202.1 MGP_LPJ_G0011293.1 mouse_genomes_project 17 10314286 10315031 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100479.1 MGP_LPJ_G0038742.1 mouse_genomes_project 17 65208001 65208135 - Gm25800 snoRNA snoRNA MGP_LPJ_T0003773.1 MGP_LPJ_G0003398.1 mouse_genomes_project 17 36622903 36627126 + antisense antisense MGP_LPJ_T0046692.1 MGP_LPJ_G0023433.1 mouse_genomes_project 17 33438999 33456559 - MGP_LPJ_P0046692 Zfp955b protein_coding protein_coding MGP_LPJ_T0045290.1 MGP_LPJ_G0023024.1 mouse_genomes_project 17 4289306 4298359 - MGP_LPJ_P0045290 protein_coding unknown_likely_coding MGP_LPJ_T0045291.1 MGP_LPJ_G0023024.1 mouse_genomes_project 17 4289310 4299291 - MGP_LPJ_P0045291 protein_coding protein_coding MGP_LPJ_T0048353.1 MGP_LPJ_G0023917.1 mouse_genomes_project 17 74649214 74650806 - Gm4707 protein_coding translated_processed_pseudogene MGP_LPJ_T0048354.1 MGP_LPJ_G0023917.1 mouse_genomes_project 17 74649912 74650188 - MGP_LPJ_P0048354 Gm4707 protein_coding protein_coding MGP_LPJ_T0048355.1 MGP_LPJ_G0023917.1 mouse_genomes_project 17 74650717 74651283 - MGP_LPJ_P0048355 Gm4707 protein_coding protein_coding MGP_LPJ_T0010184.1 MGP_LPJ_G0008302.1 mouse_genomes_project 17 10363113 10363227 - Gm24085 miRNA miRNA MGP_LPJ_T0048374.1 MGP_LPJ_G0023926.1 mouse_genomes_project 17 76197181 76220807 + MGP_LPJ_P0048374 Lbh protein_coding protein_coding MGP_LPJ_T0048375.1 MGP_LPJ_G0023926.1 mouse_genomes_project 17 76200074 76218236 + MGP_LPJ_P0048375 Lbh protein_coding nonsense_mediated_decay MGP_LPJ_T0047082.1 MGP_LPJ_G0023509.1 mouse_genomes_project 17 35384828 35389428 + MGP_LPJ_P0047082 Neu1 protein_coding protein_coding MGP_LPJ_T0047083.1 MGP_LPJ_G0023509.1 mouse_genomes_project 17 35384889 35389460 + Neu1 protein_coding retained_intron MGP_LPJ_T0047084.1 MGP_LPJ_G0023509.1 mouse_genomes_project 17 35385438 35386341 + Neu1 protein_coding retained_intron MGP_LPJ_T0101942.1 MGP_LPJ_G0039979.1 mouse_genomes_project 17 25721192 25721891 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0046229.1 MGP_LPJ_G0023316.1 mouse_genomes_project 17 26407497 26412260 + MGP_LPJ_P0046229 Phf1 protein_coding protein_coding MGP_LPJ_T0100482.1 MGP_LPJ_G0038745.1 mouse_genomes_project 17 74831103 74831188 + Snord92 snoRNA snoRNA MGP_LPJ_T0013219.1 MGP_LPJ_G0011310.1 mouse_genomes_project 17 34913335 34913743 - processed_pseudogene processed_pseudogene MGP_LPJ_T0013222.1 MGP_LPJ_G0011313.1 mouse_genomes_project 17 36980810 36980850 + processed_pseudogene processed_pseudogene MGP_LPJ_T0048135.1 MGP_LPJ_G0023841.1 mouse_genomes_project 17 59005752 59018306 - MGP_LPJ_P0048135 Lonp1 protein_coding protein_coding MGP_LPJ_T0047523.1 MGP_LPJ_G0023634.1 mouse_genomes_project 17 38723657 38724308 + MGP_LPJ_P0047523 protein_coding protein_coding MGP_LPJ_T0047824.1 MGP_LPJ_G0023748.1 mouse_genomes_project 17 48712840 48797665 - MGP_LPJ_P0047824 Ubr2 protein_coding unknown_likely_coding MGP_LPJ_T0047825.1 MGP_LPJ_G0023748.1 mouse_genomes_project 17 48712843 48797978 - MGP_LPJ_P0047825 Ubr2 protein_coding protein_coding MGP_LPJ_T0047826.1 MGP_LPJ_G0023748.1 mouse_genomes_project 17 48712843 48797978 - MGP_LPJ_P0047826 Ubr2 protein_coding protein_coding MGP_LPJ_T0048386.1 MGP_LPJ_G0023931.1 mouse_genomes_project 17 77235172 77305154 - MGP_LPJ_P0048386 Xdh protein_coding protein_coding MGP_LPJ_T0006999.1 MGP_LPJ_G0005760.1 mouse_genomes_project 17 88930090 88932834 - 1110020A21Rik lincRNA lincRNA MGP_LPJ_T0101952.1 MGP_LPJ_G0039989.1 mouse_genomes_project 17 34874234 34889970 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0048662.1 MGP_LPJ_G0024028.1 mouse_genomes_project 17 95469324 95470223 + MGP_LPJ_P0048662 Gm10308 protein_coding protein_coding MGP_LPJ_T0045588.1 MGP_LPJ_G0023148.1 mouse_genomes_project 17 20469940 20487858 + MGP_LPJ_P0045588 Zfp760 protein_coding protein_coding MGP_LPJ_T0048060.1 MGP_LPJ_G0023817.1 mouse_genomes_project 17 58364552 58384433 - MGP_LPJ_P0048060 Sh3gl1 protein_coding protein_coding MGP_LPJ_T0100462.1 MGP_LPJ_G0038725.1 mouse_genomes_project 17 10436537 10436675 + Gm26130 snoRNA snoRNA MGP_LPJ_T0045562.1 MGP_LPJ_G0023131.1 mouse_genomes_project 17 19574485 19575644 - MGP_LPJ_P0045562 Vmn1r232 protein_coding protein_coding MGP_LPJ_T0045683.1 MGP_LPJ_G0023180.1 mouse_genomes_project 17 23017217 23021532 - MGP_LPJ_P0045683 Tceb2 protein_coding protein_coding MGP_LPJ_T0045397.1 MGP_LPJ_G0023061.1 mouse_genomes_project 17 10428107 10432849 - MGP_LPJ_P0045397 Mrpl18 protein_coding protein_coding MGP_LPJ_T0045398.1 MGP_LPJ_G0023061.1 mouse_genomes_project 17 10430604 10432128 - Mrpl18 protein_coding processed_transcript MGP_LPJ_T0045399.1 MGP_LPJ_G0023061.1 mouse_genomes_project 17 10430709 10432607 - Mrpl18 protein_coding retained_intron MGP_LPJ_T0045400.1 MGP_LPJ_G0023061.1 mouse_genomes_project 17 10430753 10432706 - Mrpl18 protein_coding processed_transcript MGP_LPJ_T0045401.1 MGP_LPJ_G0023061.1 mouse_genomes_project 17 10432005 10432573 - Mrpl18 protein_coding retained_intron MGP_LPJ_T0048218.1 MGP_LPJ_G0023884.1 mouse_genomes_project 17 67675585 67679131 - MGP_LPJ_P0048218 4930583I09Rik protein_coding protein_coding MGP_LPJ_T0048494.1 MGP_LPJ_G0023973.1 mouse_genomes_project 17 84147905 84239648 - MGP_LPJ_P0048494 Sos1 protein_coding protein_coding MGP_LPJ_T0046701.1 MGP_LPJ_G0023438.1 mouse_genomes_project 17 33728045 33757640 + MGP_LPJ_P0046701 Adamts10 protein_coding protein_coding MGP_LPJ_T0046702.1 MGP_LPJ_G0023438.1 mouse_genomes_project 17 33728045 33757640 + MGP_LPJ_P0046702 Adamts10 protein_coding nonsense_mediated_decay MGP_LPJ_T0046703.1 MGP_LPJ_G0023438.1 mouse_genomes_project 17 33728050 33757639 + MGP_LPJ_P0046703 Adamts10 protein_coding nonsense_mediated_decay MGP_LPJ_T0046704.1 MGP_LPJ_G0023438.1 mouse_genomes_project 17 33728051 33733016 + Adamts10 protein_coding retained_intron MGP_LPJ_T0046705.1 MGP_LPJ_G0023438.1 mouse_genomes_project 17 33728067 33757640 + MGP_LPJ_P0046705 Adamts10 protein_coding nonsense_mediated_decay MGP_LPJ_T0046706.1 MGP_LPJ_G0023438.1 mouse_genomes_project 17 33732165 33757320 + MGP_LPJ_P0046706 Adamts10 protein_coding nonsense_mediated_decay MGP_LPJ_T0046707.1 MGP_LPJ_G0023438.1 mouse_genomes_project 17 33732165 33757320 + MGP_LPJ_P0046707 Adamts10 protein_coding nonsense_mediated_decay MGP_LPJ_T0046708.1 MGP_LPJ_G0023438.1 mouse_genomes_project 17 33735481 33757639 + MGP_LPJ_P0046708 Adamts10 protein_coding nonsense_mediated_decay MGP_LPJ_T0046709.1 MGP_LPJ_G0023438.1 mouse_genomes_project 17 33735590 33747097 + Adamts10 protein_coding processed_transcript MGP_LPJ_T0046710.1 MGP_LPJ_G0023438.1 mouse_genomes_project 17 33741208 33757640 + Adamts10 protein_coding retained_intron MGP_LPJ_T0046711.1 MGP_LPJ_G0023438.1 mouse_genomes_project 17 33741591 33757642 + Adamts10 protein_coding retained_intron MGP_LPJ_T0046712.1 MGP_LPJ_G0023438.1 mouse_genomes_project 17 33747397 33757654 + Adamts10 protein_coding retained_intron MGP_LPJ_T0003790.1 MGP_LPJ_G0003410.1 mouse_genomes_project 17 54820971 54832371 - Gm27217 antisense antisense MGP_LPJ_T0003713.1 MGP_LPJ_G0003358.1 mouse_genomes_project 17 2620155 2649745 + Gm29050 antisense antisense MGP_LPJ_T0003714.1 MGP_LPJ_G0003358.1 mouse_genomes_project 17 2635408 2652001 + Gm29050 antisense antisense MGP_LPJ_T0048043.1 MGP_LPJ_G0023809.1 mouse_genomes_project 17 58231605 58241284 + MGP_LPJ_P0048043 Zfp959 protein_coding protein_coding MGP_LPJ_T0047526.1 MGP_LPJ_G0023637.1 mouse_genomes_project 17 38826363 38827481 + MGP_LPJ_P0047526 Olfr125 protein_coding protein_coding MGP_LPJ_T0046913.1 MGP_LPJ_G0023476.1 mouse_genomes_project 17 34499029 34507553 + MGP_LPJ_P0046913 H2-Ob protein_coding protein_coding MGP_LPJ_T0046914.1 MGP_LPJ_G0023476.1 mouse_genomes_project 17 34499031 34503194 + H2-Ob protein_coding retained_intron MGP_LPJ_T0046915.1 MGP_LPJ_G0023476.1 mouse_genomes_project 17 34499057 34507444 + MGP_LPJ_P0046915 H2-Ob protein_coding protein_coding MGP_LPJ_T0046916.1 MGP_LPJ_G0023476.1 mouse_genomes_project 17 34501725 34506106 + MGP_LPJ_P0046916 H2-Ob protein_coding protein_coding MGP_LPJ_T0046886.1 MGP_LPJ_G0023468.1 mouse_genomes_project 17 34390154 34394074 + MGP_LPJ_P0046886 H2-DMa protein_coding protein_coding MGP_LPJ_T0046887.1 MGP_LPJ_G0023468.1 mouse_genomes_project 17 34392000 34393153 + H2-DMa protein_coding retained_intron MGP_LPJ_T0046514.1 MGP_LPJ_G0023380.1 mouse_genomes_project 17 29650513 29711272 - MGP_LPJ_P0046514 Mdga1 protein_coding protein_coding MGP_LPJ_T0046515.1 MGP_LPJ_G0023380.1 mouse_genomes_project 17 29650515 29710524 - MGP_LPJ_P0046515 Mdga1 protein_coding protein_coding MGP_LPJ_T0046516.1 MGP_LPJ_G0023380.1 mouse_genomes_project 17 29654605 29664777 - Mdga1 protein_coding retained_intron MGP_LPJ_T0046517.1 MGP_LPJ_G0023380.1 mouse_genomes_project 17 29654815 29657703 - Mdga1 protein_coding processed_transcript MGP_LPJ_T0046518.1 MGP_LPJ_G0023380.1 mouse_genomes_project 17 29654832 29662266 - MGP_LPJ_P0046518 Mdga1 protein_coding protein_coding MGP_LPJ_T0046519.1 MGP_LPJ_G0023380.1 mouse_genomes_project 17 29664474 29801560 - MGP_LPJ_P0046519 Mdga1 protein_coding protein_coding MGP_LPJ_T0046520.1 MGP_LPJ_G0023380.1 mouse_genomes_project 17 29672034 29710124 - MGP_LPJ_P0046520 Mdga1 protein_coding protein_coding MGP_LPJ_T0046521.1 MGP_LPJ_G0023380.1 mouse_genomes_project 17 29672915 29712572 - Mdga1 protein_coding processed_transcript MGP_LPJ_T0045827.1 MGP_LPJ_G0023222.1 mouse_genomes_project 17 24013424 24017726 + MGP_LPJ_P0045827 Noxo1 protein_coding protein_coding MGP_LPJ_T0045829.1 MGP_LPJ_G0023222.1 mouse_genomes_project 17 24015219 24015552 + Noxo1 protein_coding processed_transcript MGP_LPJ_T0045830.1 MGP_LPJ_G0023222.1 mouse_genomes_project 17 24015372 24016599 + Noxo1 protein_coding processed_transcript MGP_LPJ_T0045831.1 MGP_LPJ_G0023222.1 mouse_genomes_project 17 24015429 24017722 + Noxo1 protein_coding retained_intron MGP_LPJ_T0045832.1 MGP_LPJ_G0023222.1 mouse_genomes_project 17 24015435 24017510 + Noxo1 protein_coding retained_intron MGP_LPJ_T0045833.1 MGP_LPJ_G0023222.1 mouse_genomes_project 17 24015508 24016363 + Noxo1 protein_coding retained_intron MGP_LPJ_T0045834.1 MGP_LPJ_G0023222.1 mouse_genomes_project 17 24015537 24016875 + Noxo1 protein_coding processed_transcript MGP_LPJ_T0045835.1 MGP_LPJ_G0023222.1 mouse_genomes_project 17 24015722 24017721 + Noxo1 protein_coding processed_transcript MGP_LPJ_T0045836.1 MGP_LPJ_G0023222.1 mouse_genomes_project 17 24016589 24017713 + Noxo1 protein_coding processed_transcript MGP_LPJ_T0003738.1 MGP_LPJ_G0003370.1 mouse_genomes_project 17 24037706 24038140 - Snhg9 antisense antisense MGP_LPJ_T0010196.1 MGP_LPJ_G0008314.1 mouse_genomes_project 17 25137205 25137297 - Gm25083 miRNA miRNA MGP_LPJ_T0047417.1 MGP_LPJ_G0023585.1 mouse_genomes_project 17 37535703 37537916 - MGP_LPJ_P0047417 H2-M1 protein_coding protein_coding MGP_LPJ_T0010198.1 MGP_LPJ_G0008316.1 mouse_genomes_project 17 25229354 25229418 - Mir3082 miRNA miRNA MGP_LPJ_T0047544.1 MGP_LPJ_G0023649.1 mouse_genomes_project 17 39291255 39292195 - MGP_LPJ_P0047544 Olfr137 protein_coding protein_coding MGP_LPJ_T0101922.1 MGP_LPJ_G0039959.1 mouse_genomes_project 17 17259211 17260525 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0047089.1 MGP_LPJ_G0023514.1 mouse_genomes_project 17 35442322 35444442 + Lsm2 protein_coding retained_intron MGP_LPJ_T0047090.1 MGP_LPJ_G0023514.1 mouse_genomes_project 17 35442340 35446352 + MGP_LPJ_P0047090 Lsm2 protein_coding protein_coding MGP_LPJ_T0047091.1 MGP_LPJ_G0023514.1 mouse_genomes_project 17 35442371 35446132 + Lsm2 protein_coding processed_transcript MGP_LPJ_T0047092.1 MGP_LPJ_G0023514.1 mouse_genomes_project 17 35442581 35446053 + Lsm2 protein_coding processed_transcript MGP_LPJ_T0047093.1 MGP_LPJ_G0023514.1 mouse_genomes_project 17 35442589 35446352 + MGP_LPJ_P0047093 Lsm2 protein_coding protein_coding MGP_LPJ_T0047094.1 MGP_LPJ_G0023514.1 mouse_genomes_project 17 35442619 35446350 + Lsm2 protein_coding processed_transcript MGP_LPJ_T0047095.1 MGP_LPJ_G0023514.1 mouse_genomes_project 17 35442619 35446295 + Lsm2 protein_coding processed_transcript MGP_LPJ_T0047096.1 MGP_LPJ_G0023514.1 mouse_genomes_project 17 35442619 35446350 + MGP_LPJ_P0047096 Lsm2 protein_coding protein_coding MGP_LPJ_T0047097.1 MGP_LPJ_G0023514.1 mouse_genomes_project 17 35442629 35445958 + Lsm2 protein_coding retained_intron MGP_LPJ_T0047098.1 MGP_LPJ_G0023514.1 mouse_genomes_project 17 35442669 35445958 + Lsm2 protein_coding retained_intron MGP_LPJ_T0047099.1 MGP_LPJ_G0023514.1 mouse_genomes_project 17 35445068 35446351 + Lsm2 protein_coding retained_intron MGP_LPJ_T0100490.1 MGP_LPJ_G0038753.1 mouse_genomes_project 17 91639160 91639294 - Gm26005 snoRNA snoRNA MGP_LPJ_T0047607.1 MGP_LPJ_G0023690.1 mouse_genomes_project 17 45669714 45677428 + MGP_LPJ_P0047607 Enpp5 protein_coding protein_coding MGP_LPJ_T0047608.1 MGP_LPJ_G0023690.1 mouse_genomes_project 17 45669746 45677419 + MGP_LPJ_P0047608 Enpp5 protein_coding protein_coding MGP_LPJ_T0047609.1 MGP_LPJ_G0023690.1 mouse_genomes_project 17 45669780 45677428 + MGP_LPJ_P0047609 Enpp5 protein_coding nonsense_mediated_decay MGP_LPJ_T0047818.1 MGP_LPJ_G0023743.1 mouse_genomes_project 17 48541276 48549983 - MGP_LPJ_P0047818 Rpl7l1 protein_coding protein_coding MGP_LPJ_T0047710.1 MGP_LPJ_G0023713.1 mouse_genomes_project 17 47875282 47883679 + MGP_LPJ_P0047710 Gtpbp2 protein_coding protein_coding MGP_LPJ_T0047711.1 MGP_LPJ_G0023713.1 mouse_genomes_project 17 47875282 47883677 + MGP_LPJ_P0047711 Gtpbp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0047712.1 MGP_LPJ_G0023713.1 mouse_genomes_project 17 47875299 47877769 + Gtpbp2 protein_coding processed_transcript MGP_LPJ_T0047713.1 MGP_LPJ_G0023713.1 mouse_genomes_project 17 47875316 47883645 + MGP_LPJ_P0047713 Gtpbp2 protein_coding protein_coding MGP_LPJ_T0047714.1 MGP_LPJ_G0023713.1 mouse_genomes_project 17 47875361 47878616 + MGP_LPJ_P0047714 Gtpbp2 protein_coding protein_coding MGP_LPJ_T0047715.1 MGP_LPJ_G0023713.1 mouse_genomes_project 17 47875424 47876422 + Gtpbp2 protein_coding processed_transcript MGP_LPJ_T0047716.1 MGP_LPJ_G0023713.1 mouse_genomes_project 17 47875558 47879059 + Gtpbp2 protein_coding processed_transcript MGP_LPJ_T0047717.1 MGP_LPJ_G0023713.1 mouse_genomes_project 17 47877296 47879130 + Gtpbp2 protein_coding retained_intron MGP_LPJ_T0047718.1 MGP_LPJ_G0023713.1 mouse_genomes_project 17 47877489 47880104 + Gtpbp2 protein_coding processed_transcript MGP_LPJ_T0047719.1 MGP_LPJ_G0023713.1 mouse_genomes_project 17 47877581 47879497 + Gtpbp2 protein_coding retained_intron MGP_LPJ_T0047720.1 MGP_LPJ_G0023713.1 mouse_genomes_project 17 47880004 47882191 + Gtpbp2 protein_coding retained_intron MGP_LPJ_T0047721.1 MGP_LPJ_G0023713.1 mouse_genomes_project 17 47880086 47881641 + Gtpbp2 protein_coding retained_intron MGP_LPJ_T0047722.1 MGP_LPJ_G0023713.1 mouse_genomes_project 17 47880739 47882543 + MGP_LPJ_P0047722 Gtpbp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0047723.1 MGP_LPJ_G0023713.1 mouse_genomes_project 17 47881175 47882330 + Gtpbp2 protein_coding retained_intron MGP_LPJ_T0047724.1 MGP_LPJ_G0023713.1 mouse_genomes_project 17 47881296 47882520 + Gtpbp2 protein_coding retained_intron MGP_LPJ_T0047725.1 MGP_LPJ_G0023713.1 mouse_genomes_project 17 47881539 47882703 + MGP_LPJ_P0047725 Gtpbp2 protein_coding protein_coding MGP_LPJ_T0047726.1 MGP_LPJ_G0023713.1 mouse_genomes_project 17 47881944 47882719 + Gtpbp2 protein_coding retained_intron MGP_LPJ_T0048387.1 MGP_LPJ_G0023932.1 mouse_genomes_project 17 77373174 77404871 - MGP_LPJ_P0048387 Srd5a2 protein_coding protein_coding MGP_LPJ_T0045701.1 MGP_LPJ_G0023190.1 mouse_genomes_project 17 23233169 23236272 - MGP_LPJ_P0045701 Prss30 protein_coding protein_coding MGP_LPJ_T0045702.1 MGP_LPJ_G0023190.1 mouse_genomes_project 17 23233882 23235843 - MGP_LPJ_P0045702 Prss30 protein_coding protein_coding MGP_LPJ_T0045703.1 MGP_LPJ_G0023190.1 mouse_genomes_project 17 23234109 23236216 - Prss30 protein_coding retained_intron MGP_LPJ_T0045704.1 MGP_LPJ_G0023190.1 mouse_genomes_project 17 23234133 23235722 - MGP_LPJ_P0045704 Prss30 protein_coding nonsense_mediated_decay MGP_LPJ_T0045705.1 MGP_LPJ_G0023190.1 mouse_genomes_project 17 23234709 23236240 - MGP_LPJ_P0045705 Prss30 protein_coding protein_coding MGP_LPJ_T0047419.1 MGP_LPJ_G0023587.1 mouse_genomes_project 17 37693497 37696895 + MGP_LPJ_P0047419 protein_coding protein_coding MGP_LPJ_T0048393.1 MGP_LPJ_G0023936.1 mouse_genomes_project 17 77731409 77784591 + MGP_LPJ_P0048393 Spast protein_coding protein_coding MGP_LPJ_T0048394.1 MGP_LPJ_G0023936.1 mouse_genomes_project 17 77731459 77784592 + MGP_LPJ_P0048394 Spast protein_coding unknown_likely_coding MGP_LPJ_T0048152.1 MGP_LPJ_G0023854.1 mouse_genomes_project 17 59412359 59419157 + MGP_LPJ_P0048152 Clpp protein_coding unknown_likely_coding MGP_LPJ_T0017504.1 MGP_LPJ_G0015263.1 mouse_genomes_project 17 33969614 33971488 + Gm17251 processed_transcript processed_transcript MGP_LPJ_T0048148.1 MGP_LPJ_G0023851.1 mouse_genomes_project 17 59291894 59306290 + MGP_LPJ_P0048148 1700061G19Rik protein_coding protein_coding MGP_LPJ_T0048149.1 MGP_LPJ_G0023851.1 mouse_genomes_project 17 59291920 59294236 + 1700061G19Rik protein_coding retained_intron MGP_LPJ_T0010197.1 MGP_LPJ_G0008315.1 mouse_genomes_project 17 25174630 25174702 + Mir6966 miRNA miRNA MGP_LPJ_T0045402.1 MGP_LPJ_G0023062.1 mouse_genomes_project 17 10432204 10435067 + Tcp1 protein_coding processed_transcript MGP_LPJ_T0045403.1 MGP_LPJ_G0023062.1 mouse_genomes_project 17 10432942 10435332 + MGP_LPJ_P0045403 Tcp1 protein_coding protein_coding MGP_LPJ_T0045404.1 MGP_LPJ_G0023062.1 mouse_genomes_project 17 10432952 10437181 + Tcp1 protein_coding retained_intron MGP_LPJ_T0045405.1 MGP_LPJ_G0023062.1 mouse_genomes_project 17 10432952 10441515 + Tcp1 protein_coding retained_intron MGP_LPJ_T0045406.1 MGP_LPJ_G0023062.1 mouse_genomes_project 17 10432978 10436511 + Tcp1 protein_coding retained_intron MGP_LPJ_T0045407.1 MGP_LPJ_G0023062.1 mouse_genomes_project 17 10433069 10441429 + MGP_LPJ_P0045407 Tcp1 protein_coding protein_coding MGP_LPJ_T0045408.1 MGP_LPJ_G0023062.1 mouse_genomes_project 17 10436625 10437593 + Tcp1 protein_coding retained_intron MGP_LPJ_T0045409.1 MGP_LPJ_G0023062.1 mouse_genomes_project 17 10437069 10439685 + Tcp1 protein_coding retained_intron MGP_LPJ_T0045410.1 MGP_LPJ_G0023062.1 mouse_genomes_project 17 10437233 10438101 + Tcp1 protein_coding retained_intron MGP_LPJ_T0048363.1 MGP_LPJ_G0023921.1 mouse_genomes_project 17 74875015 74888611 + Fam179a protein_coding processed_transcript MGP_LPJ_T0048364.1 MGP_LPJ_G0023921.1 mouse_genomes_project 17 74875015 74934035 + MGP_LPJ_P0048364 Fam179a protein_coding protein_coding MGP_LPJ_T0048365.1 MGP_LPJ_G0023921.1 mouse_genomes_project 17 74875019 74892583 + Fam179a protein_coding processed_transcript MGP_LPJ_T0048366.1 MGP_LPJ_G0023921.1 mouse_genomes_project 17 74888243 74934035 + MGP_LPJ_P0048366 Fam179a protein_coding protein_coding MGP_LPJ_T0048367.1 MGP_LPJ_G0023921.1 mouse_genomes_project 17 74890119 74933909 + MGP_LPJ_P0048367 Fam179a protein_coding protein_coding MGP_LPJ_T0048368.1 MGP_LPJ_G0023921.1 mouse_genomes_project 17 74916591 74934035 + Fam179a protein_coding retained_intron MGP_LPJ_T0046461.1 MGP_LPJ_G0023367.1 mouse_genomes_project 17 29017193 29030897 - MGP_LPJ_P0046461 Ppil1 protein_coding protein_coding MGP_LPJ_T0046462.1 MGP_LPJ_G0023367.1 mouse_genomes_project 17 29017614 29023279 - Ppil1 protein_coding retained_intron MGP_LPJ_T0046463.1 MGP_LPJ_G0023367.1 mouse_genomes_project 17 29017653 29030653 - MGP_LPJ_P0046463 Ppil1 protein_coding nonsense_mediated_decay MGP_LPJ_T0046464.1 MGP_LPJ_G0023367.1 mouse_genomes_project 17 29027837 29030679 - Ppil1 protein_coding processed_transcript MGP_LPJ_T0006970.1 MGP_LPJ_G0005742.1 mouse_genomes_project 17 49819350 49822324 + lincRNA lincRNA MGP_LPJ_T0045538.1 MGP_LPJ_G0023107.1 mouse_genomes_project 17 16482534 16513489 + MGP_LPJ_P0045538 protein_coding protein_coding MGP_LPJ_T0048081.1 MGP_LPJ_G0023827.1 mouse_genomes_project 17 58540501 58574504 - MGP_LPJ_P0048081 Dpp9 protein_coding unknown_likely_coding MGP_LPJ_T0047455.1 MGP_LPJ_G0023599.1 mouse_genomes_project 17 37871665 37879326 - H2-M5 protein_coding retained_intron MGP_LPJ_T0047456.1 MGP_LPJ_G0023599.1 mouse_genomes_project 17 37872687 37878971 - MGP_LPJ_P0047456 H2-M5 protein_coding unknown_likely_coding MGP_LPJ_T0047457.1 MGP_LPJ_G0023599.1 mouse_genomes_project 17 37872687 37878761 - MGP_LPJ_P0047457 H2-M5 protein_coding unknown_likely_coding MGP_LPJ_T0047458.1 MGP_LPJ_G0023599.1 mouse_genomes_project 17 37876653 37879293 - MGP_LPJ_P0047458 H2-M5 protein_coding protein_coding MGP_LPJ_T0047459.1 MGP_LPJ_G0023599.1 mouse_genomes_project 17 37876913 37878987 - MGP_LPJ_P0047459 H2-M5 protein_coding protein_coding MGP_LPJ_T0047460.1 MGP_LPJ_G0023599.1 mouse_genomes_project 17 37876913 37878987 - MGP_LPJ_P0047460 H2-M5 protein_coding protein_coding MGP_LPJ_T0047461.1 MGP_LPJ_G0023599.1 mouse_genomes_project 17 37877295 37878844 - MGP_LPJ_P0047461 H2-M5 protein_coding protein_coding MGP_LPJ_T0048381.1 MGP_LPJ_G0023928.1 mouse_genomes_project 17 76603373 76704530 - MGP_LPJ_P0048381 Capn13 protein_coding protein_coding MGP_LPJ_T0048531.1 MGP_LPJ_G0023990.1 mouse_genomes_project 17 88437181 88551458 + MGP_LPJ_P0048531 Plekhh2 protein_coding protein_coding MGP_LPJ_T0047549.1 MGP_LPJ_G0023654.1 mouse_genomes_project 17 40152930 40154763 + MGP_LPJ_P0047549 Esp24 protein_coding protein_coding MGP_LPJ_T0046547.1 MGP_LPJ_G0023393.1 mouse_genomes_project 17 31224132 31250093 - MGP_LPJ_P0046547 Rsph1 protein_coding protein_coding MGP_LPJ_T0017533.1 MGP_LPJ_G0015271.1 mouse_genomes_project 17 74754708 74796869 - Trmt61b processed_transcript processed_transcript MGP_LPJ_T0017534.1 MGP_LPJ_G0015271.1 mouse_genomes_project 17 74754743 74796860 - Trmt61b processed_transcript processed_transcript MGP_LPJ_T0017535.1 MGP_LPJ_G0015271.1 mouse_genomes_project 17 74786165 74796367 - Trmt61b processed_transcript processed_transcript MGP_LPJ_T0045944.1 MGP_LPJ_G0023248.1 mouse_genomes_project 17 24521134 24524242 + MGP_LPJ_P0045944 BC003965 protein_coding protein_coding MGP_LPJ_T0006976.1 MGP_LPJ_G0005744.1 mouse_genomes_project 17 52354732 52362797 + AY702103 lincRNA lincRNA MGP_LPJ_T0006977.1 MGP_LPJ_G0005744.1 mouse_genomes_project 17 52354928 52357044 + AY702103 lincRNA lincRNA MGP_LPJ_T0001022.1 MGP_LPJ_G0000947.1 mouse_genomes_project 17 54033851 54035738 + TEC TEC MGP_LPJ_T0048373.1 MGP_LPJ_G0023925.1 mouse_genomes_project 17 76114649 76129132 + MGP_LPJ_P0048373 Ypel5 protein_coding protein_coding MGP_LPJ_T0006998.1 MGP_LPJ_G0005759.1 mouse_genomes_project 17 87717892 87721919 - C430042M11Rik lincRNA lincRNA MGP_LPJ_T0047379.1 MGP_LPJ_G0023572.1 mouse_genomes_project 17 36565360 36572953 - MGP_LPJ_P0047379 Prr3 protein_coding protein_coding MGP_LPJ_T0047380.1 MGP_LPJ_G0023572.1 mouse_genomes_project 17 36565360 36571812 - MGP_LPJ_P0047380 Prr3 protein_coding protein_coding MGP_LPJ_T0047381.1 MGP_LPJ_G0023572.1 mouse_genomes_project 17 36566323 36571400 - MGP_LPJ_P0047381 Prr3 protein_coding protein_coding MGP_LPJ_T0047382.1 MGP_LPJ_G0023572.1 mouse_genomes_project 17 36567579 36572367 - MGP_LPJ_P0047382 Prr3 protein_coding protein_coding MGP_LPJ_T0047383.1 MGP_LPJ_G0023572.1 mouse_genomes_project 17 36570600 36572289 - MGP_LPJ_P0047383 Prr3 protein_coding protein_coding MGP_LPJ_T0047384.1 MGP_LPJ_G0023572.1 mouse_genomes_project 17 36570836 36572649 - MGP_LPJ_P0047384 Prr3 protein_coding protein_coding MGP_LPJ_T0047385.1 MGP_LPJ_G0023572.1 mouse_genomes_project 17 36571004 36572649 - MGP_LPJ_P0047385 Prr3 protein_coding protein_coding MGP_LPJ_T0047386.1 MGP_LPJ_G0023572.1 mouse_genomes_project 17 36571259 36572520 - MGP_LPJ_P0047386 Prr3 protein_coding protein_coding MGP_LPJ_T0047387.1 MGP_LPJ_G0023572.1 mouse_genomes_project 17 36571370 36572140 - Prr3 protein_coding retained_intron MGP_LPJ_T0045417.1 MGP_LPJ_G0023066.1 mouse_genomes_project 17 11112138 11250550 - Tcte2 protein_coding processed_transcript MGP_LPJ_T0045418.1 MGP_LPJ_G0023066.1 mouse_genomes_project 17 11114079 11458290 - Tcte2 protein_coding processed_transcript MGP_LPJ_T0045419.1 MGP_LPJ_G0023066.1 mouse_genomes_project 17 11114079 11354567 - Tcte2 protein_coding processed_transcript MGP_LPJ_T0045425.1 MGP_LPJ_G0023066.1 mouse_genomes_project 17 11408372 11458290 - MGP_LPJ_P0045425 Tcte2 protein_coding protein_coding MGP_LPJ_T0045426.1 MGP_LPJ_G0023066.1 mouse_genomes_project 17 11408378 11458314 - MGP_LPJ_P0045426 Tcte2 protein_coding protein_coding MGP_LPJ_T0045427.1 MGP_LPJ_G0023066.1 mouse_genomes_project 17 11409959 11458279 - MGP_LPJ_P0045427 Tcte2 protein_coding nonsense_mediated_decay MGP_LPJ_T0045428.1 MGP_LPJ_G0023066.1 mouse_genomes_project 17 11409977 11429749 - MGP_LPJ_P0045428 Tcte2 protein_coding protein_coding MGP_LPJ_T0045429.1 MGP_LPJ_G0023066.1 mouse_genomes_project 17 11412364 11458513 - MGP_LPJ_P0045429 Tcte2 protein_coding protein_coding MGP_LPJ_T0045430.1 MGP_LPJ_G0023066.1 mouse_genomes_project 17 11412364 11458737 - MGP_LPJ_P0045430 Tcte2 protein_coding protein_coding MGP_LPJ_T0045431.1 MGP_LPJ_G0023066.1 mouse_genomes_project 17 11412364 11458298 - MGP_LPJ_P0045431 Tcte2 protein_coding protein_coding MGP_LPJ_T0046806.1 MGP_LPJ_G0023454.1 mouse_genomes_project 17 34163434 34164957 - MGP_LPJ_P0046806 Pfdn6 protein_coding protein_coding MGP_LPJ_T0046807.1 MGP_LPJ_G0023454.1 mouse_genomes_project 17 34163523 34164944 - MGP_LPJ_P0046807 Pfdn6 protein_coding protein_coding MGP_LPJ_T0046808.1 MGP_LPJ_G0023454.1 mouse_genomes_project 17 34163532 34164939 - MGP_LPJ_P0046808 Pfdn6 protein_coding protein_coding MGP_LPJ_T0046809.1 MGP_LPJ_G0023454.1 mouse_genomes_project 17 34163536 34164918 - MGP_LPJ_P0046809 Pfdn6 protein_coding protein_coding MGP_LPJ_T0046810.1 MGP_LPJ_G0023454.1 mouse_genomes_project 17 34163559 34164944 - MGP_LPJ_P0046810 Pfdn6 protein_coding protein_coding MGP_LPJ_T0046811.1 MGP_LPJ_G0023454.1 mouse_genomes_project 17 34163971 34164433 - Pfdn6 protein_coding retained_intron MGP_LPJ_T0048436.1 MGP_LPJ_G0023946.1 mouse_genomes_project 17 82043243 82086534 - MGP_LPJ_P0048436 Fez2 protein_coding protein_coding MGP_LPJ_T0048437.1 MGP_LPJ_G0023946.1 mouse_genomes_project 17 82043243 82086534 - MGP_LPJ_P0048437 Fez2 protein_coding protein_coding MGP_LPJ_T0003726.1 MGP_LPJ_G0003364.1 mouse_genomes_project 17 10223979 10358105 + antisense antisense MGP_LPJ_T0003727.1 MGP_LPJ_G0003364.1 mouse_genomes_project 17 10223998 10325748 + antisense antisense MGP_LPJ_T0003728.1 MGP_LPJ_G0003364.1 mouse_genomes_project 17 10224042 10311051 + antisense antisense MGP_LPJ_T0003729.1 MGP_LPJ_G0003364.1 mouse_genomes_project 17 10224053 10310211 + antisense antisense MGP_LPJ_T0003730.1 MGP_LPJ_G0003364.1 mouse_genomes_project 17 10224066 10325649 + antisense antisense MGP_LPJ_T0003731.1 MGP_LPJ_G0003364.1 mouse_genomes_project 17 10311424 10325833 + antisense antisense MGP_LPJ_T0047671.1 MGP_LPJ_G0023704.1 mouse_genomes_project 17 47267473 47268609 - MGP_LPJ_P0047671 Gm7325 protein_coding protein_coding MGP_LPJ_T0047672.1 MGP_LPJ_G0023704.1 mouse_genomes_project 17 47267473 47268574 - MGP_LPJ_P0047672 Gm7325 protein_coding protein_coding MGP_LPJ_T0047673.1 MGP_LPJ_G0023704.1 mouse_genomes_project 17 47267473 47268422 - MGP_LPJ_P0047673 Gm7325 protein_coding protein_coding MGP_LPJ_T0046165.1 MGP_LPJ_G0023301.1 mouse_genomes_project 17 25628780 25637071 + Rgs11 protein_coding processed_transcript MGP_LPJ_T0046166.1 MGP_LPJ_G0023301.1 mouse_genomes_project 17 25628787 25637075 + MGP_LPJ_P0046166 Rgs11 protein_coding protein_coding MGP_LPJ_T0046167.1 MGP_LPJ_G0023301.1 mouse_genomes_project 17 25628791 25637080 + MGP_LPJ_P0046167 Rgs11 protein_coding protein_coding MGP_LPJ_T0046168.1 MGP_LPJ_G0023301.1 mouse_genomes_project 17 25628792 25629662 + Rgs11 protein_coding retained_intron MGP_LPJ_T0046169.1 MGP_LPJ_G0023301.1 mouse_genomes_project 17 25628794 25629465 + Rgs11 protein_coding retained_intron MGP_LPJ_T0046170.1 MGP_LPJ_G0023301.1 mouse_genomes_project 17 25628805 25637073 + Rgs11 protein_coding retained_intron MGP_LPJ_T0046171.1 MGP_LPJ_G0023301.1 mouse_genomes_project 17 25628809 25629804 + Rgs11 protein_coding retained_intron MGP_LPJ_T0046172.1 MGP_LPJ_G0023301.1 mouse_genomes_project 17 25628831 25632617 + Rgs11 protein_coding retained_intron MGP_LPJ_T0046173.1 MGP_LPJ_G0023301.1 mouse_genomes_project 17 25628841 25629926 + Rgs11 protein_coding retained_intron MGP_LPJ_T0046174.1 MGP_LPJ_G0023301.1 mouse_genomes_project 17 25633264 25637073 + Rgs11 protein_coding retained_intron MGP_LPJ_T0046175.1 MGP_LPJ_G0023301.1 mouse_genomes_project 17 25633652 25637071 + Rgs11 protein_coding retained_intron MGP_LPJ_T0048500.1 MGP_LPJ_G0023977.1 mouse_genomes_project 17 84745161 84802788 + MGP_LPJ_P0048500 Tmem178 protein_coding protein_coding MGP_LPJ_T0006921.1 MGP_LPJ_G0005703.1 mouse_genomes_project 17 22911398 22920470 + 9530082P21Rik lincRNA lincRNA MGP_LPJ_T0006922.1 MGP_LPJ_G0005703.1 mouse_genomes_project 17 22918796 22923634 + 9530082P21Rik lincRNA lincRNA MGP_LPJ_T0006923.1 MGP_LPJ_G0005703.1 mouse_genomes_project 17 22918897 22920762 + 9530082P21Rik lincRNA lincRNA MGP_LPJ_T0003795.1 MGP_LPJ_G0003413.1 mouse_genomes_project 17 67589725 67594971 - Gm17133 antisense antisense MGP_LPJ_T0006902.1 MGP_LPJ_G0005688.1 mouse_genomes_project 17 3073709 3079165 + 3300005D01Rik lincRNA lincRNA MGP_LPJ_T0006903.1 MGP_LPJ_G0005688.1 mouse_genomes_project 17 3073751 3079320 + 3300005D01Rik lincRNA lincRNA MGP_LPJ_T0006904.1 MGP_LPJ_G0005688.1 mouse_genomes_project 17 3074543 3079512 + 3300005D01Rik lincRNA lincRNA MGP_LPJ_T0006905.1 MGP_LPJ_G0005688.1 mouse_genomes_project 17 3074704 3079166 + 3300005D01Rik lincRNA lincRNA MGP_LPJ_T0046323.1 MGP_LPJ_G0023340.1 mouse_genomes_project 17 27762981 27797848 + MGP_LPJ_P0046323 Scube3 protein_coding protein_coding MGP_LPJ_T0046324.1 MGP_LPJ_G0023340.1 mouse_genomes_project 17 27775353 27794510 + Scube3 protein_coding processed_transcript MGP_LPJ_T0046325.1 MGP_LPJ_G0023340.1 mouse_genomes_project 17 27776510 27793141 + MGP_LPJ_P0046325 Scube3 protein_coding protein_coding MGP_LPJ_T0046326.1 MGP_LPJ_G0023340.1 mouse_genomes_project 17 27783756 27796023 + Scube3 protein_coding processed_transcript MGP_LPJ_T0046327.1 MGP_LPJ_G0023340.1 mouse_genomes_project 17 27788804 27790644 + Scube3 protein_coding retained_intron MGP_LPJ_T0048001.1 MGP_LPJ_G0023793.1 mouse_genomes_project 17 52872579 53181471 - MGP_LPJ_P0048001 Tbc1d5 protein_coding unknown_likely_coding MGP_LPJ_T0048002.1 MGP_LPJ_G0023793.1 mouse_genomes_project 17 52872585 53347796 - MGP_LPJ_P0048002 Tbc1d5 protein_coding protein_coding MGP_LPJ_T0046305.1 MGP_LPJ_G0023335.1 mouse_genomes_project 17 27443287 27456908 + MGP_LPJ_P0046305 Snrpc protein_coding protein_coding MGP_LPJ_T0046306.1 MGP_LPJ_G0023335.1 mouse_genomes_project 17 27443447 27456912 + Snrpc protein_coding retained_intron MGP_LPJ_T0046248.1 MGP_LPJ_G0023321.1 mouse_genomes_project 17 26506798 26515939 - MGP_LPJ_P0046248 Bak1 protein_coding protein_coding MGP_LPJ_T0046249.1 MGP_LPJ_G0023321.1 mouse_genomes_project 17 26506800 26515508 - MGP_LPJ_P0046249 Bak1 protein_coding nonsense_mediated_decay MGP_LPJ_T0046250.1 MGP_LPJ_G0023321.1 mouse_genomes_project 17 26507654 26509740 - MGP_LPJ_P0046250 Bak1 protein_coding protein_coding MGP_LPJ_T0046251.1 MGP_LPJ_G0023321.1 mouse_genomes_project 17 26509529 26515517 - Bak1 protein_coding processed_transcript MGP_LPJ_T0048141.1 MGP_LPJ_G0023846.1 mouse_genomes_project 17 59158180 59164382 - MGP_LPJ_P0048141 Nrtn protein_coding protein_coding MGP_LPJ_T0047388.1 MGP_LPJ_G0023573.1 mouse_genomes_project 17 36572691 36584546 + MGP_LPJ_P0047388 Gnl1 protein_coding protein_coding MGP_LPJ_T0047389.1 MGP_LPJ_G0023573.1 mouse_genomes_project 17 36574939 36575695 + Gnl1 protein_coding retained_intron MGP_LPJ_T0101962.1 MGP_LPJ_G0039999.1 mouse_genomes_project 17 36865429 36866350 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0006953.1 MGP_LPJ_G0005728.1 mouse_genomes_project 17 34557085 34571355 - Gm20513 lincRNA lincRNA MGP_LPJ_T0045358.1 MGP_LPJ_G0023047.1 mouse_genomes_project 17 7029976 7033184 - MGP_LPJ_P0045358 Pabpc6 protein_coding protein_coding MGP_LPJ_T0048204.1 MGP_LPJ_G0023879.1 mouse_genomes_project 17 65849328 66252052 - Fbxl17 protein_coding processed_transcript MGP_LPJ_T0048205.1 MGP_LPJ_G0023879.1 mouse_genomes_project 17 65850484 66247598 - Fbxl17 protein_coding processed_transcript MGP_LPJ_T0048206.1 MGP_LPJ_G0023879.1 mouse_genomes_project 17 65851817 66297435 - MGP_LPJ_P0048206 Fbxl17 protein_coding protein_coding MGP_LPJ_T0048207.1 MGP_LPJ_G0023879.1 mouse_genomes_project 17 66178102 66277167 - Fbxl17 protein_coding processed_transcript MGP_LPJ_T0013254.1 MGP_LPJ_G0011345.1 mouse_genomes_project 17 58362086 58362348 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099207.1 MGP_LPJ_G0037470.1 mouse_genomes_project 17 11360989 11361096 + Gm24867 snRNA snRNA MGP_LPJ_T0046812.1 MGP_LPJ_G0023455.1 mouse_genomes_project 17 34165273 34174309 + MGP_LPJ_P0046812 Wdr46 protein_coding protein_coding MGP_LPJ_T0046813.1 MGP_LPJ_G0023455.1 mouse_genomes_project 17 34165330 34166074 + Wdr46 protein_coding retained_intron MGP_LPJ_T0046814.1 MGP_LPJ_G0023455.1 mouse_genomes_project 17 34166018 34168292 + Wdr46 protein_coding retained_intron MGP_LPJ_T0003751.1 MGP_LPJ_G0003381.1 mouse_genomes_project 17 30505620 30510487 - 1700097N02Rik antisense antisense MGP_LPJ_T0048173.1 MGP_LPJ_G0023863.1 mouse_genomes_project 17 59530411 59537840 - MGP_LPJ_P0048173 Tubb4a protein_coding protein_coding MGP_LPJ_T0048138.1 MGP_LPJ_G0023844.1 mouse_genomes_project 17 59116067 59121691 - MGP_LPJ_P0048138 Vmac protein_coding protein_coding MGP_LPJ_T0048139.1 MGP_LPJ_G0023844.1 mouse_genomes_project 17 59116067 59120913 - MGP_LPJ_P0048139 Vmac protein_coding protein_coding MGP_LPJ_T0045285.1 MGP_LPJ_G0023020.1 mouse_genomes_project 17 4058983 4106458 - MGP_LPJ_P0045285 Ezr protein_coding protein_coding MGP_LPJ_T0045286.1 MGP_LPJ_G0023020.1 mouse_genomes_project 17 4061779 4063766 - Ezr protein_coding processed_transcript MGP_LPJ_T0098201.1 MGP_LPJ_G0036482.1 mouse_genomes_project 17 74704546 74704654 - Gm23115 rRNA rRNA MGP_LPJ_T0046958.1 MGP_LPJ_G0023488.1 mouse_genomes_project 17 34942177 34947143 + MGP_LPJ_P0046958 Pbx2 protein_coding protein_coding MGP_LPJ_T0046959.1 MGP_LPJ_G0023488.1 mouse_genomes_project 17 34942393 34946156 + MGP_LPJ_P0046959 Pbx2 protein_coding protein_coding MGP_LPJ_T0046960.1 MGP_LPJ_G0023488.1 mouse_genomes_project 17 34943089 34944095 + MGP_LPJ_P0046960 Pbx2 protein_coding protein_coding MGP_LPJ_T0046961.1 MGP_LPJ_G0023488.1 mouse_genomes_project 17 34945199 34945967 + Pbx2 protein_coding retained_intron MGP_LPJ_T0047967.1 MGP_LPJ_G0023783.1 mouse_genomes_project 17 50416612 50431095 - MGP_LPJ_P0047967 Apobec2 protein_coding protein_coding MGP_LPJ_T0006965.1 MGP_LPJ_G0005738.1 mouse_genomes_project 17 47089670 47098848 + B230354K17Rik lincRNA lincRNA MGP_LPJ_T0045727.1 MGP_LPJ_G0023198.1 mouse_genomes_project 17 23434148 23438972 - Atp6v0c protein_coding processed_transcript MGP_LPJ_T0045728.1 MGP_LPJ_G0023198.1 mouse_genomes_project 17 23434148 23441410 - MGP_LPJ_P0045728 Atp6v0c protein_coding protein_coding MGP_LPJ_T0045729.1 MGP_LPJ_G0023198.1 mouse_genomes_project 17 23434435 23441626 - MGP_LPJ_P0045729 Atp6v0c protein_coding protein_coding MGP_LPJ_T0045730.1 MGP_LPJ_G0023198.1 mouse_genomes_project 17 23434702 23441597 - MGP_LPJ_P0045730 Atp6v0c protein_coding protein_coding MGP_LPJ_T0045731.1 MGP_LPJ_G0023198.1 mouse_genomes_project 17 23434820 23441015 - Atp6v0c protein_coding processed_transcript MGP_LPJ_T0045732.1 MGP_LPJ_G0023198.1 mouse_genomes_project 17 23434824 23441651 - MGP_LPJ_P0045732 Atp6v0c protein_coding protein_coding MGP_LPJ_T0045310.1 MGP_LPJ_G0023033.1 mouse_genomes_project 17 5295022 5373396 - MGP_LPJ_P0045310 protein_coding protein_coding MGP_LPJ_T0048663.1 MGP_LPJ_G0024029.1 mouse_genomes_project 17 97631464 97637538 + MGP_LPJ_P0048663 Adcyap1 protein_coding protein_coding MGP_LPJ_T0047633.1 MGP_LPJ_G0023697.1 mouse_genomes_project 17 47167431 47181315 + MGP_LPJ_P0047633 Aars2 protein_coding protein_coding MGP_LPJ_T0045857.1 MGP_LPJ_G0023231.1 mouse_genomes_project 17 24178807 24180213 - MGP_LPJ_P0045857 Fahd1 protein_coding protein_coding MGP_LPJ_T0006946.1 MGP_LPJ_G0005721.1 mouse_genomes_project 17 32343147 32358322 + Gm26549 lincRNA lincRNA MGP_LPJ_T0047545.1 MGP_LPJ_G0023650.1 mouse_genomes_project 17 39336441 39337380 + MGP_LPJ_P0047545 Olfr136 protein_coding protein_coding MGP_LPJ_T0003749.1 MGP_LPJ_G0003380.1 mouse_genomes_project 17 29381807 29398964 - Tbc1d22bos antisense antisense MGP_LPJ_T0003750.1 MGP_LPJ_G0003380.1 mouse_genomes_project 17 29390499 29398938 - Tbc1d22bos antisense antisense MGP_LPJ_T0098005.1 MGP_LPJ_G0036286.1 mouse_genomes_project 17 38560166 38561130 - pseudogene pseudogene MGP_LPJ_T0099237.1 MGP_LPJ_G0037500.1 mouse_genomes_project 17 83844576 83844682 + Gm23125 snRNA snRNA MGP_LPJ_T0048072.1 MGP_LPJ_G0023822.1 mouse_genomes_project 17 58463506 58469502 - MGP_LPJ_P0048072 Plin5 protein_coding protein_coding MGP_LPJ_T0048073.1 MGP_LPJ_G0023822.1 mouse_genomes_project 17 58463512 58469204 - MGP_LPJ_P0048073 Plin5 protein_coding protein_coding MGP_LPJ_T0006951.1 MGP_LPJ_G0005726.1 mouse_genomes_project 17 34277296 34277401 - Gm26940 lincRNA lincRNA MGP_LPJ_T0046865.1 MGP_LPJ_G0023465.1 mouse_genomes_project 17 34291767 34318989 + MGP_LPJ_P0046865 Col11a2 protein_coding protein_coding MGP_LPJ_T0046866.1 MGP_LPJ_G0023465.1 mouse_genomes_project 17 34291767 34318546 + MGP_LPJ_P0046866 Col11a2 protein_coding protein_coding MGP_LPJ_T0046867.1 MGP_LPJ_G0023465.1 mouse_genomes_project 17 34291767 34318546 + MGP_LPJ_P0046867 Col11a2 protein_coding protein_coding MGP_LPJ_T0046868.1 MGP_LPJ_G0023465.1 mouse_genomes_project 17 34291767 34304799 + MGP_LPJ_P0046868 Col11a2 protein_coding protein_coding MGP_LPJ_T0046869.1 MGP_LPJ_G0023465.1 mouse_genomes_project 17 34300561 34312256 + MGP_LPJ_P0046869 Col11a2 protein_coding protein_coding MGP_LPJ_T0046870.1 MGP_LPJ_G0023465.1 mouse_genomes_project 17 34304588 34306611 + Col11a2 protein_coding processed_transcript MGP_LPJ_T0046871.1 MGP_LPJ_G0023465.1 mouse_genomes_project 17 34307362 34308726 + Col11a2 protein_coding retained_intron MGP_LPJ_T0046872.1 MGP_LPJ_G0023465.1 mouse_genomes_project 17 34314724 34317097 + Col11a2 protein_coding retained_intron MGP_LPJ_T0048177.1 MGP_LPJ_G0023867.1 mouse_genomes_project 17 59640326 59645024 - MGP_LPJ_P0048177 Tnfsf14 protein_coding protein_coding MGP_LPJ_T0010232.1 MGP_LPJ_G0008350.1 mouse_genomes_project 17 58598758 58598869 + Mir7b miRNA miRNA MGP_LPJ_T0047540.1 MGP_LPJ_G0023648.1 mouse_genomes_project 17 39255090 39270273 + MGP_LPJ_P0047540 Olfr138 protein_coding protein_coding MGP_LPJ_T0047541.1 MGP_LPJ_G0023648.1 mouse_genomes_project 17 39255091 39271133 + MGP_LPJ_P0047541 Olfr138 protein_coding protein_coding MGP_LPJ_T0047542.1 MGP_LPJ_G0023648.1 mouse_genomes_project 17 39255101 39270563 + MGP_LPJ_P0047542 Olfr138 protein_coding protein_coding MGP_LPJ_T0047543.1 MGP_LPJ_G0023648.1 mouse_genomes_project 17 39270194 39271133 + MGP_LPJ_P0047543 Olfr138 protein_coding protein_coding MGP_LPJ_T0047405.1 MGP_LPJ_G0023580.1 mouse_genomes_project 17 37022838 37032694 - MGP_LPJ_P0047405 Trim39 protein_coding nonsense_mediated_decay MGP_LPJ_T0047406.1 MGP_LPJ_G0023580.1 mouse_genomes_project 17 37022838 37035950 - MGP_LPJ_P0047406 Trim39 protein_coding protein_coding MGP_LPJ_T0047407.1 MGP_LPJ_G0023580.1 mouse_genomes_project 17 37022838 37035513 - MGP_LPJ_P0047407 Trim39 protein_coding protein_coding MGP_LPJ_T0047408.1 MGP_LPJ_G0023580.1 mouse_genomes_project 17 37023075 37033162 - MGP_LPJ_P0047408 Trim39 protein_coding protein_coding MGP_LPJ_T0047409.1 MGP_LPJ_G0023580.1 mouse_genomes_project 17 37025497 37032637 - Trim39 protein_coding processed_transcript MGP_LPJ_T0047410.1 MGP_LPJ_G0023580.1 mouse_genomes_project 17 37026577 37035329 - Trim39 protein_coding processed_transcript MGP_LPJ_T0047411.1 MGP_LPJ_G0023580.1 mouse_genomes_project 17 37026579 37036193 - Trim39 protein_coding retained_intron MGP_LPJ_T0048382.1 MGP_LPJ_G0023929.1 mouse_genomes_project 17 76805506 77034561 - MGP_LPJ_P0048382 Galnt14 protein_coding protein_coding MGP_LPJ_T0048383.1 MGP_LPJ_G0023929.1 mouse_genomes_project 17 76819860 77034525 - MGP_LPJ_P0048383 Galnt14 protein_coding protein_coding MGP_LPJ_T0048384.1 MGP_LPJ_G0023929.1 mouse_genomes_project 17 76890093 77034563 - Galnt14 protein_coding retained_intron MGP_LPJ_T0045420.1 MGP_LPJ_G0023067.1 mouse_genomes_project 17 11162379 11164262 + MGP_LPJ_P0045420 protein_coding protein_coding MGP_LPJ_T0099242.1 MGP_LPJ_G0037505.1 mouse_genomes_project 17 92619828 92619923 - Gm22542 snRNA snRNA MGP_LPJ_T0098509.1 MGP_LPJ_G0036785.1 mouse_genomes_project 17 66093252 66101378 - 4930405O22Rik sense_intronic sense_intronic MGP_LPJ_T0098510.1 MGP_LPJ_G0036785.1 mouse_genomes_project 17 66093485 66101380 - 4930405O22Rik sense_intronic sense_intronic MGP_LPJ_T0048556.1 MGP_LPJ_G0024000.1 mouse_genomes_project 17 89718303 89722257 - MGP_LPJ_P0048556 Six2 protein_coding protein_coding MGP_LPJ_T0048557.1 MGP_LPJ_G0024000.1 mouse_genomes_project 17 89718308 89722237 - MGP_LPJ_P0048557 Six2 protein_coding protein_coding MGP_LPJ_T0010199.1 MGP_LPJ_G0008317.1 mouse_genomes_project 17 26034437 26034563 - Gm22420 miRNA miRNA MGP_LPJ_T0047151.1 MGP_LPJ_G0023526.1 mouse_genomes_project 17 35556093 35558656 + Abhd16a protein_coding retained_intron MGP_LPJ_T0047152.1 MGP_LPJ_G0023526.1 mouse_genomes_project 17 35556121 35569817 + MGP_LPJ_P0047152 Abhd16a protein_coding protein_coding MGP_LPJ_T0047153.1 MGP_LPJ_G0023526.1 mouse_genomes_project 17 35556144 35569786 + MGP_LPJ_P0047153 Abhd16a protein_coding nonsense_mediated_decay MGP_LPJ_T0047154.1 MGP_LPJ_G0023526.1 mouse_genomes_project 17 35556700 35558796 + Abhd16a protein_coding retained_intron MGP_LPJ_T0047155.1 MGP_LPJ_G0023526.1 mouse_genomes_project 17 35563181 35567770 + Abhd16a protein_coding processed_transcript MGP_LPJ_T0047156.1 MGP_LPJ_G0023526.1 mouse_genomes_project 17 35566760 35567525 + Abhd16a protein_coding retained_intron MGP_LPJ_T0047157.1 MGP_LPJ_G0023526.1 mouse_genomes_project 17 35567683 35568860 + Abhd16a protein_coding retained_intron MGP_LPJ_T0013212.1 MGP_LPJ_G0011303.1 mouse_genomes_project 17 27086471 27086740 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100476.1 MGP_LPJ_G0038739.1 mouse_genomes_project 17 50642993 50643125 + Gm24071 snoRNA snoRNA MGP_LPJ_T0045507.1 MGP_LPJ_G0023091.1 mouse_genomes_project 17 15504388 15600544 - MGP_LPJ_P0045507 Lnpep protein_coding protein_coding MGP_LPJ_T0047531.1 MGP_LPJ_G0023642.1 mouse_genomes_project 17 39044457 39046156 - MGP_LPJ_P0047531 Olfr129 protein_coding protein_coding MGP_LPJ_T0047532.1 MGP_LPJ_G0023642.1 mouse_genomes_project 17 39044457 39050349 - MGP_LPJ_P0047532 Olfr129 protein_coding protein_coding MGP_LPJ_T0006906.1 MGP_LPJ_G0005689.1 mouse_genomes_project 17 4122063 4152720 - Gm2885 lincRNA lincRNA MGP_LPJ_T0046426.1 MGP_LPJ_G0023361.1 mouse_genomes_project 17 28687198 28699359 + MGP_LPJ_P0046426 Kctd20 protein_coding protein_coding MGP_LPJ_T0046427.1 MGP_LPJ_G0023361.1 mouse_genomes_project 17 28687684 28704787 + MGP_LPJ_P0046427 Kctd20 protein_coding protein_coding MGP_LPJ_T0046428.1 MGP_LPJ_G0023361.1 mouse_genomes_project 17 28687714 28703168 + MGP_LPJ_P0046428 Kctd20 protein_coding protein_coding MGP_LPJ_T0046429.1 MGP_LPJ_G0023361.1 mouse_genomes_project 17 28687751 28702331 + Kctd20 protein_coding processed_transcript MGP_LPJ_T0046430.1 MGP_LPJ_G0023361.1 mouse_genomes_project 17 28687847 28703168 + MGP_LPJ_P0046430 Kctd20 protein_coding protein_coding MGP_LPJ_T0046431.1 MGP_LPJ_G0023361.1 mouse_genomes_project 17 28687936 28700318 + MGP_LPJ_P0046431 Kctd20 protein_coding protein_coding MGP_LPJ_T0046432.1 MGP_LPJ_G0023361.1 mouse_genomes_project 17 28688464 28703176 + MGP_LPJ_P0046432 Kctd20 protein_coding protein_coding MGP_LPJ_T0046433.1 MGP_LPJ_G0023361.1 mouse_genomes_project 17 28688464 28703174 + MGP_LPJ_P0046433 Kctd20 protein_coding protein_coding MGP_LPJ_T0047943.1 MGP_LPJ_G0023778.1 mouse_genomes_project 17 50297512 50308561 + MGP_LPJ_P0047943 B430306N03Rik protein_coding protein_coding MGP_LPJ_T0047944.1 MGP_LPJ_G0023778.1 mouse_genomes_project 17 50297536 50307056 + MGP_LPJ_P0047944 B430306N03Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0047945.1 MGP_LPJ_G0023778.1 mouse_genomes_project 17 50297942 50305730 + MGP_LPJ_P0047945 B430306N03Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0048568.1 MGP_LPJ_G0024006.1 mouse_genomes_project 17 91081414 91085149 - MGP_LPJ_P0048568 Atp6v1e2 protein_coding protein_coding MGP_LPJ_T0048062.1 MGP_LPJ_G0023819.1 mouse_genomes_project 17 58416097 58424081 - MGP_LPJ_P0048062 Ubxn6 protein_coding protein_coding MGP_LPJ_T0048063.1 MGP_LPJ_G0023819.1 mouse_genomes_project 17 58417302 58424070 - Ubxn6 protein_coding retained_intron MGP_LPJ_T0048064.1 MGP_LPJ_G0023819.1 mouse_genomes_project 17 58417302 58421285 - Ubxn6 protein_coding retained_intron MGP_LPJ_T0048065.1 MGP_LPJ_G0023819.1 mouse_genomes_project 17 58417588 58418487 - Ubxn6 protein_coding retained_intron MGP_LPJ_T0048066.1 MGP_LPJ_G0023819.1 mouse_genomes_project 17 58418690 58421493 - Ubxn6 protein_coding processed_transcript MGP_LPJ_T0048067.1 MGP_LPJ_G0023819.1 mouse_genomes_project 17 58419170 58423901 - Ubxn6 protein_coding retained_intron MGP_LPJ_T0048068.1 MGP_LPJ_G0023819.1 mouse_genomes_project 17 58419696 58423600 - MGP_LPJ_P0048068 Ubxn6 protein_coding protein_coding MGP_LPJ_T0006952.1 MGP_LPJ_G0005727.1 mouse_genomes_project 17 34510702 34511910 + Gm20506 lincRNA lincRNA MGP_LPJ_T0048190.1 MGP_LPJ_G0023872.1 mouse_genomes_project 17 59822174 59924870 + MGP_LPJ_P0048190 Adgre1 protein_coding protein_coding MGP_LPJ_T0048191.1 MGP_LPJ_G0023872.1 mouse_genomes_project 17 59822202 59924864 + MGP_LPJ_P0048191 Adgre1 protein_coding protein_coding MGP_LPJ_T0047569.1 MGP_LPJ_G0023670.1 mouse_genomes_project 17 42253788 42285311 + MGP_LPJ_P0047569 Rhag protein_coding protein_coding MGP_LPJ_T0046027.1 MGP_LPJ_G0023270.1 mouse_genomes_project 17 25139034 25144740 - MGP_LPJ_P0046027 Msln protein_coding protein_coding MGP_LPJ_T0046695.1 MGP_LPJ_G0023436.1 mouse_genomes_project 17 33559415 33592396 - Zfp101 protein_coding processed_transcript MGP_LPJ_T0046696.1 MGP_LPJ_G0023436.1 mouse_genomes_project 17 33576514 33592659 - MGP_LPJ_P0046696 Zfp101 protein_coding protein_coding MGP_LPJ_T0046697.1 MGP_LPJ_G0023436.1 mouse_genomes_project 17 33578614 33592375 - MGP_LPJ_P0046697 Zfp101 protein_coding protein_coding MGP_LPJ_T0046698.1 MGP_LPJ_G0023436.1 mouse_genomes_project 17 33579324 33592641 - MGP_LPJ_P0046698 Zfp101 protein_coding protein_coding MGP_LPJ_T0046699.1 MGP_LPJ_G0023436.1 mouse_genomes_project 17 33583096 33592623 - Zfp101 protein_coding processed_transcript MGP_LPJ_T0047529.1 MGP_LPJ_G0023640.1 mouse_genomes_project 17 38936944 38939261 - MGP_LPJ_P0047529 protein_coding protein_coding MGP_LPJ_T0048251.1 MGP_LPJ_G0023894.1 mouse_genomes_project 17 69000338 69009343 + MGP_LPJ_P0048251 Wash1 protein_coding protein_coding MGP_LPJ_T0048252.1 MGP_LPJ_G0023894.1 mouse_genomes_project 17 69000437 69009343 + MGP_LPJ_P0048252 Wash1 protein_coding protein_coding MGP_LPJ_T0045865.1 MGP_LPJ_G0023235.1 mouse_genomes_project 17 24217391 24222743 + MGP_LPJ_P0045865 Spsb3 protein_coding protein_coding MGP_LPJ_T0045866.1 MGP_LPJ_G0023235.1 mouse_genomes_project 17 24217402 24222740 + MGP_LPJ_P0045866 Spsb3 protein_coding protein_coding MGP_LPJ_T0045867.1 MGP_LPJ_G0023235.1 mouse_genomes_project 17 24217430 24221189 + MGP_LPJ_P0045867 Spsb3 protein_coding nonsense_mediated_decay MGP_LPJ_T0045868.1 MGP_LPJ_G0023235.1 mouse_genomes_project 17 24217465 24222730 + MGP_LPJ_P0045868 Spsb3 protein_coding protein_coding MGP_LPJ_T0045869.1 MGP_LPJ_G0023235.1 mouse_genomes_project 17 24217487 24222745 + Spsb3 protein_coding retained_intron MGP_LPJ_T0045870.1 MGP_LPJ_G0023235.1 mouse_genomes_project 17 24217877 24222742 + MGP_LPJ_P0045870 Spsb3 protein_coding protein_coding MGP_LPJ_T0045871.1 MGP_LPJ_G0023235.1 mouse_genomes_project 17 24218574 24221033 + MGP_LPJ_P0045871 Spsb3 protein_coding nonsense_mediated_decay MGP_LPJ_T0047158.1 MGP_LPJ_G0023527.1 mouse_genomes_project 17 35576864 35581127 + MGP_LPJ_P0047158 Ly6g5c protein_coding protein_coding MGP_LPJ_T0046151.1 MGP_LPJ_G0023298.1 mouse_genomes_project 17 25561414 25621640 + MGP_LPJ_P0046151 Axin1 protein_coding protein_coding MGP_LPJ_T0046152.1 MGP_LPJ_G0023298.1 mouse_genomes_project 17 25561554 25621070 + MGP_LPJ_P0046152 Axin1 protein_coding protein_coding MGP_LPJ_T0046153.1 MGP_LPJ_G0023298.1 mouse_genomes_project 17 25561676 25621123 + MGP_LPJ_P0046153 Axin1 protein_coding protein_coding MGP_LPJ_T0046154.1 MGP_LPJ_G0023298.1 mouse_genomes_project 17 25566078 25609800 + MGP_LPJ_P0046154 Axin1 protein_coding protein_coding MGP_LPJ_T0046155.1 MGP_LPJ_G0023298.1 mouse_genomes_project 17 25613628 25614271 + Axin1 protein_coding retained_intron MGP_LPJ_T0010225.1 MGP_LPJ_G0008343.1 mouse_genomes_project 17 36509166 36509247 + Mir1894 miRNA miRNA MGP_LPJ_T0046522.1 MGP_LPJ_G0023381.1 mouse_genomes_project 17 29838717 30048765 + MGP_LPJ_P0046522 Zfand3 protein_coding protein_coding MGP_LPJ_T0046523.1 MGP_LPJ_G0023381.1 mouse_genomes_project 17 29838813 30048726 + MGP_LPJ_P0046523 Zfand3 protein_coding unknown_likely_coding MGP_LPJ_T0099229.1 MGP_LPJ_G0037492.1 mouse_genomes_project 17 60170431 60170543 + Gm25102 snRNA snRNA MGP_LPJ_T0100463.1 MGP_LPJ_G0038726.1 mouse_genomes_project 17 10439742 10439870 + Snora20 snoRNA snoRNA MGP_LPJ_T0101990.1 MGP_LPJ_G0040027.1 mouse_genomes_project 17 38996905 39005861 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0046654.1 MGP_LPJ_G0023417.1 mouse_genomes_project 17 32735055 32753950 + MGP_LPJ_P0046654 Cyp4f40 protein_coding protein_coding MGP_LPJ_T0046548.1 MGP_LPJ_G0023394.1 mouse_genomes_project 17 31269075 31326766 + MGP_LPJ_P0046548 Slc37a1 protein_coding protein_coding MGP_LPJ_T0046549.1 MGP_LPJ_G0023394.1 mouse_genomes_project 17 31269811 31326766 + MGP_LPJ_P0046549 Slc37a1 protein_coding protein_coding MGP_LPJ_T0047314.1 MGP_LPJ_G0023563.1 mouse_genomes_project 17 36416688 36434343 + MGP_LPJ_P0047314 Mdc1 protein_coding protein_coding MGP_LPJ_T0047315.1 MGP_LPJ_G0023563.1 mouse_genomes_project 17 36416827 36434349 + MGP_LPJ_P0047315 Mdc1 protein_coding unknown_likely_coding MGP_LPJ_T0047316.1 MGP_LPJ_G0023563.1 mouse_genomes_project 17 36416849 36421188 + MGP_LPJ_P0047316 Mdc1 protein_coding protein_coding MGP_LPJ_T0047320.1 MGP_LPJ_G0023565.1 mouse_genomes_project 17 36441040 36452428 + MGP_LPJ_P0047320 Ppp1r18 protein_coding protein_coding MGP_LPJ_T0047321.1 MGP_LPJ_G0023565.1 mouse_genomes_project 17 36441072 36452329 + MGP_LPJ_P0047321 Ppp1r18 protein_coding protein_coding MGP_LPJ_T0047322.1 MGP_LPJ_G0023565.1 mouse_genomes_project 17 36441503 36452433 + MGP_LPJ_P0047322 Ppp1r18 protein_coding protein_coding MGP_LPJ_T0047323.1 MGP_LPJ_G0023565.1 mouse_genomes_project 17 36442062 36452433 + MGP_LPJ_P0047323 Ppp1r18 protein_coding protein_coding MGP_LPJ_T0047324.1 MGP_LPJ_G0023565.1 mouse_genomes_project 17 36442107 36452424 + MGP_LPJ_P0047324 Ppp1r18 protein_coding protein_coding MGP_LPJ_T0047325.1 MGP_LPJ_G0023565.1 mouse_genomes_project 17 36443850 36452431 + MGP_LPJ_P0047325 Ppp1r18 protein_coding protein_coding MGP_LPJ_T0045526.1 MGP_LPJ_G0023097.1 mouse_genomes_project 17 15887970 15969644 + MGP_LPJ_P0045526 Fpr3 protein_coding protein_coding MGP_LPJ_T0045529.1 MGP_LPJ_G0023097.1 mouse_genomes_project 17 15968437 15969644 + MGP_LPJ_P0045529 Fpr3 protein_coding protein_coding MGP_LPJ_T0045244.1 MGP_LPJ_G0023008.1 mouse_genomes_project 17 2649671 2651116 - MGP_LPJ_P0045244 Ldhal6b protein_coding protein_coding MGP_LPJ_T0101973.1 MGP_LPJ_G0040010.1 mouse_genomes_project 17 37552904 37554485 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0047392.1 MGP_LPJ_G0023575.1 mouse_genomes_project 17 36620525 36623717 - MGP_LPJ_P0047392 H2-T23 protein_coding protein_coding MGP_LPJ_T0047393.1 MGP_LPJ_G0023575.1 mouse_genomes_project 17 36622244 36623592 - H2-T23 protein_coding retained_intron MGP_LPJ_T0046261.1 MGP_LPJ_G0023326.1 mouse_genomes_project 17 26983780 27067208 - MGP_LPJ_P0046261 Grm4 protein_coding protein_coding MGP_LPJ_T0046262.1 MGP_LPJ_G0023326.1 mouse_genomes_project 17 26987300 27077269 - MGP_LPJ_P0046262 Grm4 protein_coding protein_coding MGP_LPJ_T0046263.1 MGP_LPJ_G0023326.1 mouse_genomes_project 17 27012966 27034551 - Grm4 protein_coding retained_intron MGP_LPJ_T0046264.1 MGP_LPJ_G0023326.1 mouse_genomes_project 17 27014438 27034302 - Grm4 protein_coding processed_transcript MGP_LPJ_T0046655.1 MGP_LPJ_G0023418.1 mouse_genomes_project 17 32765083 32784619 + MGP_LPJ_P0046655 Cyp4f15 protein_coding protein_coding MGP_LPJ_T0046656.1 MGP_LPJ_G0023418.1 mouse_genomes_project 17 32765124 32770559 + Cyp4f15 protein_coding retained_intron MGP_LPJ_T0046657.1 MGP_LPJ_G0023418.1 mouse_genomes_project 17 32765127 32778115 + Cyp4f15 protein_coding processed_transcript MGP_LPJ_T0046658.1 MGP_LPJ_G0023418.1 mouse_genomes_project 17 32765135 32784619 + MGP_LPJ_P0046658 Cyp4f15 protein_coding protein_coding MGP_LPJ_T0046670.1 MGP_LPJ_G0023424.1 mouse_genomes_project 17 33036248 33059935 - MGP_LPJ_P0046670 Cyp4f13 protein_coding protein_coding MGP_LPJ_T0046671.1 MGP_LPJ_G0023424.1 mouse_genomes_project 17 33036261 33059912 - MGP_LPJ_P0046671 Cyp4f13 protein_coding protein_coding MGP_LPJ_T0046672.1 MGP_LPJ_G0023424.1 mouse_genomes_project 17 33036276 33059899 - MGP_LPJ_P0046672 Cyp4f13 protein_coding nonsense_mediated_decay MGP_LPJ_T0046673.1 MGP_LPJ_G0023424.1 mouse_genomes_project 17 33036892 33037446 - Cyp4f13 protein_coding retained_intron MGP_LPJ_T0046674.1 MGP_LPJ_G0023424.1 mouse_genomes_project 17 33043989 33059935 - MGP_LPJ_P0046674 Cyp4f13 protein_coding nonsense_mediated_decay MGP_LPJ_T0046675.1 MGP_LPJ_G0023424.1 mouse_genomes_project 17 33044201 33059893 - MGP_LPJ_P0046675 Cyp4f13 protein_coding nonsense_mediated_decay MGP_LPJ_T0046676.1 MGP_LPJ_G0023424.1 mouse_genomes_project 17 33052358 33059924 - Cyp4f13 protein_coding retained_intron MGP_LPJ_T0045695.1 MGP_LPJ_G0023185.1 mouse_genomes_project 17 23077437 23161486 + MGP_LPJ_P0045695 Dcpp1 protein_coding protein_coding MGP_LPJ_T0045697.1 MGP_LPJ_G0023185.1 mouse_genomes_project 17 23141977 23156972 + MGP_LPJ_P0045697 Dcpp1 protein_coding protein_coding MGP_LPJ_T0046232.1 MGP_LPJ_G0023318.1 mouse_genomes_project 17 26415628 26452354 + MGP_LPJ_P0046232 Syngap1 protein_coding protein_coding MGP_LPJ_T0046233.1 MGP_LPJ_G0023318.1 mouse_genomes_project 17 26415817 26446365 + MGP_LPJ_P0046233 Syngap1 protein_coding protein_coding MGP_LPJ_T0046234.1 MGP_LPJ_G0023318.1 mouse_genomes_project 17 26415827 26446325 + MGP_LPJ_P0046234 Syngap1 protein_coding protein_coding MGP_LPJ_T0046235.1 MGP_LPJ_G0023318.1 mouse_genomes_project 17 26415874 26451031 + MGP_LPJ_P0046235 Syngap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0046236.1 MGP_LPJ_G0023318.1 mouse_genomes_project 17 26426378 26450843 + MGP_LPJ_P0046236 Syngap1 protein_coding protein_coding MGP_LPJ_T0046237.1 MGP_LPJ_G0023318.1 mouse_genomes_project 17 26432336 26452354 + MGP_LPJ_P0046237 Syngap1 protein_coding protein_coding MGP_LPJ_T0046238.1 MGP_LPJ_G0023318.1 mouse_genomes_project 17 26432792 26435078 + MGP_LPJ_P0046238 Syngap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0046239.1 MGP_LPJ_G0023318.1 mouse_genomes_project 17 26434804 26435522 + Syngap1 protein_coding retained_intron MGP_LPJ_T0046240.1 MGP_LPJ_G0023318.1 mouse_genomes_project 17 26437272 26446346 + MGP_LPJ_P0046240 Syngap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0046241.1 MGP_LPJ_G0023318.1 mouse_genomes_project 17 26437978 26450501 + MGP_LPJ_P0046241 Syngap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0046242.1 MGP_LPJ_G0023318.1 mouse_genomes_project 17 26437992 26446371 + MGP_LPJ_P0046242 Syngap1 protein_coding nonsense_mediated_decay MGP_LPJ_T0048032.1 MGP_LPJ_G0023801.1 mouse_genomes_project 17 56098463 56116198 - MGP_LPJ_P0048032 Sult1c2 protein_coding protein_coding MGP_LPJ_T0045708.1 MGP_LPJ_G0023193.1 mouse_genomes_project 17 23303477 23311131 + MGP_LPJ_P0045708 Prss27 protein_coding protein_coding MGP_LPJ_T0045559.1 MGP_LPJ_G0023128.1 mouse_genomes_project 17 19468952 19469873 + MGP_LPJ_P0045559 Vmn1r229 protein_coding protein_coding MGP_LPJ_T0007000.1 MGP_LPJ_G0005761.1 mouse_genomes_project 17 89836954 89867049 - Gm29418 lincRNA lincRNA MGP_LPJ_T0048634.1 MGP_LPJ_G0024026.1 mouse_genomes_project 17 93286105 93509070 - MGP_LPJ_P0048634 Fshr protein_coding protein_coding MGP_LPJ_T0013262.1 MGP_LPJ_G0011353.1 mouse_genomes_project 17 76481865 76483295 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017490.1 MGP_LPJ_G0015256.1 mouse_genomes_project 17 23481823 23494331 + BC028777 processed_transcript processed_transcript MGP_LPJ_T0017491.1 MGP_LPJ_G0015256.1 mouse_genomes_project 17 23485468 23494516 + BC028777 processed_transcript processed_transcript MGP_LPJ_T0045670.1 MGP_LPJ_G0023178.1 mouse_genomes_project 17 22956648 22969389 - MGP_LPJ_P0045670 Flywch2 protein_coding protein_coding MGP_LPJ_T0045671.1 MGP_LPJ_G0023178.1 mouse_genomes_project 17 22956691 22959526 - MGP_LPJ_P0045671 Flywch2 protein_coding nonsense_mediated_decay MGP_LPJ_T0045672.1 MGP_LPJ_G0023178.1 mouse_genomes_project 17 22956724 22969360 - MGP_LPJ_P0045672 Flywch2 protein_coding nonsense_mediated_decay MGP_LPJ_T0101935.1 MGP_LPJ_G0039972.1 mouse_genomes_project 17 19763691 19784185 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0001028.1 MGP_LPJ_G0000953.1 mouse_genomes_project 17 74580907 74583560 - TEC TEC MGP_LPJ_T0047051.1 MGP_LPJ_G0023504.1 mouse_genomes_project 17 35279084 35308163 - MGP_LPJ_P0047051 Gm20547 protein_coding protein_coding MGP_LPJ_T0047052.1 MGP_LPJ_G0023504.1 mouse_genomes_project 17 35279098 35295182 - MGP_LPJ_P0047052 Gm20547 protein_coding protein_coding MGP_LPJ_T0048040.1 MGP_LPJ_G0023806.1 mouse_genomes_project 17 57983984 58044860 - MGP_LPJ_P0048040 Pot1b protein_coding protein_coding MGP_LPJ_T0047554.1 MGP_LPJ_G0023659.1 mouse_genomes_project 17 40669372 40673988 + MGP_LPJ_P0047554 Esp18 protein_coding protein_coding MGP_LPJ_T0048151.1 MGP_LPJ_G0023853.1 mouse_genomes_project 17 59373712 59404096 - MGP_LPJ_P0048151 Acer1 protein_coding protein_coding MGP_LPJ_T0011448.1 MGP_LPJ_G0009566.1 mouse_genomes_project 17 63901875 63902171 + Gm23773 misc_RNA misc_RNA MGP_LPJ_T0045652.1 MGP_LPJ_G0023169.1 mouse_genomes_project 17 22847048 22848680 + MGP_LPJ_P0045652 Hcfc1r1 protein_coding protein_coding MGP_LPJ_T0045653.1 MGP_LPJ_G0023169.1 mouse_genomes_project 17 22847060 22848680 + MGP_LPJ_P0045653 Hcfc1r1 protein_coding protein_coding MGP_LPJ_T0045654.1 MGP_LPJ_G0023169.1 mouse_genomes_project 17 22847079 22848627 + MGP_LPJ_P0045654 Hcfc1r1 protein_coding protein_coding MGP_LPJ_T0011442.1 MGP_LPJ_G0009560.1 mouse_genomes_project 17 37851916 37851992 - Gm27735 misc_RNA misc_RNA MGP_LPJ_T0047298.1 MGP_LPJ_G0023560.1 mouse_genomes_project 17 36396399 36397639 + MGP_LPJ_P0047298 Ier3 protein_coding protein_coding MGP_LPJ_T0045361.1 MGP_LPJ_G0023049.1 mouse_genomes_project 17 7782947 8241294 - MGP_LPJ_P0045361 Pacrg protein_coding protein_coding MGP_LPJ_T0045362.1 MGP_LPJ_G0023049.1 mouse_genomes_project 17 7967276 8025394 - Pacrg protein_coding processed_transcript MGP_LPJ_T0046940.1 MGP_LPJ_G0023485.1 mouse_genomes_project 17 34809255 34857493 - Btnl6 protein_coding unprocessed_pseudogene MGP_LPJ_T0046941.1 MGP_LPJ_G0023485.1 mouse_genomes_project 17 34809386 34857493 - MGP_LPJ_P0046941 Btnl6 protein_coding protein_coding MGP_LPJ_T0048468.1 MGP_LPJ_G0023960.1 mouse_genomes_project 17 83332912 83396861 + MGP_LPJ_P0048468 Rmdn2 protein_coding protein_coding MGP_LPJ_T0048469.1 MGP_LPJ_G0023960.1 mouse_genomes_project 17 83333336 83396395 + MGP_LPJ_P0048469 Rmdn2 protein_coding unknown_likely_coding MGP_LPJ_T0011449.1 MGP_LPJ_G0009567.1 mouse_genomes_project 17 70543351 70543628 + Gm22277 misc_RNA misc_RNA MGP_LPJ_T0048209.1 MGP_LPJ_G0023881.1 mouse_genomes_project 17 66695571 66954951 + MGP_LPJ_P0048209 protein_coding unknown_likely_coding MGP_LPJ_T0048210.1 MGP_LPJ_G0023881.1 mouse_genomes_project 17 66741807 66955428 + MGP_LPJ_P0048210 protein_coding protein_coding MGP_LPJ_T0013235.1 MGP_LPJ_G0011326.1 mouse_genomes_project 17 38932112 38932606 + processed_pseudogene processed_pseudogene MGP_LPJ_T0013248.1 MGP_LPJ_G0011339.1 mouse_genomes_project 17 56022668 56023669 + processed_pseudogene processed_pseudogene MGP_LPJ_T0045853.1 MGP_LPJ_G0023228.1 mouse_genomes_project 17 24061763 24070994 + MGP_LPJ_P0045853 Msrb1 protein_coding protein_coding MGP_LPJ_T0045854.1 MGP_LPJ_G0023228.1 mouse_genomes_project 17 24061803 24070987 + MGP_LPJ_P0045854 Msrb1 protein_coding protein_coding MGP_LPJ_T0047770.1 MGP_LPJ_G0023724.1 mouse_genomes_project 17 48172369 48180094 - MGP_LPJ_P0047770 Slc22a7 protein_coding protein_coding MGP_LPJ_T0048376.1 MGP_LPJ_G0023927.1 mouse_genomes_project 17 76398881 76458402 + MGP_LPJ_P0048376 Lclat1 protein_coding protein_coding MGP_LPJ_T0048377.1 MGP_LPJ_G0023927.1 mouse_genomes_project 17 76398884 76488388 + MGP_LPJ_P0048377 Lclat1 protein_coding protein_coding MGP_LPJ_T0048378.1 MGP_LPJ_G0023927.1 mouse_genomes_project 17 76398890 76534425 + MGP_LPJ_P0048378 Lclat1 protein_coding protein_coding MGP_LPJ_T0048379.1 MGP_LPJ_G0023927.1 mouse_genomes_project 17 76459399 76530973 + Lclat1 protein_coding processed_transcript MGP_LPJ_T0048380.1 MGP_LPJ_G0023927.1 mouse_genomes_project 17 76495749 76531436 + Lclat1 protein_coding processed_transcript MGP_LPJ_T0046389.1 MGP_LPJ_G0023351.1 mouse_genomes_project 17 28236878 28240236 - MGP_LPJ_P0046389 Clps protein_coding protein_coding MGP_LPJ_T0046390.1 MGP_LPJ_G0023351.1 mouse_genomes_project 17 28236881 28240181 - MGP_LPJ_P0046390 Clps protein_coding protein_coding MGP_LPJ_T0047930.1 MGP_LPJ_G0023771.1 mouse_genomes_project 17 50008054 50009339 + MGP_LPJ_P0047930 1700067P10Rik protein_coding protein_coding MGP_LPJ_T0046134.1 MGP_LPJ_G0023293.1 mouse_genomes_project 17 25396570 25431964 - MGP_LPJ_P0046134 Rab11fip3 protein_coding protein_coding MGP_LPJ_T0046135.1 MGP_LPJ_G0023293.1 mouse_genomes_project 17 25396570 25482425 - MGP_LPJ_P0046135 Rab11fip3 protein_coding protein_coding MGP_LPJ_T0046136.1 MGP_LPJ_G0023293.1 mouse_genomes_project 17 25396579 25482657 - MGP_LPJ_P0046136 Rab11fip3 protein_coding protein_coding MGP_LPJ_T0046137.1 MGP_LPJ_G0023293.1 mouse_genomes_project 17 25412518 25431922 - Rab11fip3 protein_coding retained_intron MGP_LPJ_T0046138.1 MGP_LPJ_G0023293.1 mouse_genomes_project 17 25423954 25428570 - MGP_LPJ_P0046138 Rab11fip3 protein_coding protein_coding MGP_LPJ_T0046139.1 MGP_LPJ_G0023293.1 mouse_genomes_project 17 25447580 25482483 - Rab11fip3 protein_coding processed_transcript MGP_LPJ_T0047450.1 MGP_LPJ_G0023597.1 mouse_genomes_project 17 37846182 37853230 + MGP_LPJ_P0047450 Znrd1as protein_coding protein_coding MGP_LPJ_T0047451.1 MGP_LPJ_G0023597.1 mouse_genomes_project 17 37846209 37852508 + Znrd1as protein_coding retained_intron MGP_LPJ_T0047452.1 MGP_LPJ_G0023597.1 mouse_genomes_project 17 37846231 37853219 + MGP_LPJ_P0047452 Znrd1as protein_coding protein_coding MGP_LPJ_T0011438.1 MGP_LPJ_G0009556.1 mouse_genomes_project 17 28814756 28814928 + Gm27599 misc_RNA misc_RNA MGP_LPJ_T0013221.1 MGP_LPJ_G0011312.1 mouse_genomes_project 17 36532742 36533069 - processed_pseudogene processed_pseudogene MGP_LPJ_T0046596.1 MGP_LPJ_G0023401.1 mouse_genomes_project 17 31699988 31703785 + MGP_LPJ_P0046596 Cryaa protein_coding protein_coding MGP_LPJ_T0046018.1 MGP_LPJ_G0023267.1 mouse_genomes_project 17 25105163 25113602 - MGP_LPJ_P0046018 Chtf18 protein_coding protein_coding MGP_LPJ_T0046019.1 MGP_LPJ_G0023267.1 mouse_genomes_project 17 25105163 25113554 - MGP_LPJ_P0046019 Chtf18 protein_coding nonsense_mediated_decay MGP_LPJ_T0046020.1 MGP_LPJ_G0023267.1 mouse_genomes_project 17 25105267 25113549 - Chtf18 protein_coding retained_intron MGP_LPJ_T0046021.1 MGP_LPJ_G0023267.1 mouse_genomes_project 17 25105283 25107138 - MGP_LPJ_P0046021 Chtf18 protein_coding protein_coding MGP_LPJ_T0046022.1 MGP_LPJ_G0023267.1 mouse_genomes_project 17 25105284 25106189 - MGP_LPJ_P0046022 Chtf18 protein_coding protein_coding MGP_LPJ_T0046023.1 MGP_LPJ_G0023267.1 mouse_genomes_project 17 25106505 25107135 - Chtf18 protein_coding retained_intron MGP_LPJ_T0046024.1 MGP_LPJ_G0023267.1 mouse_genomes_project 17 25111758 25113593 - MGP_LPJ_P0046024 Chtf18 protein_coding protein_coding MGP_LPJ_T0048395.1 MGP_LPJ_G0023937.1 mouse_genomes_project 17 77789297 77820950 + MGP_LPJ_P0048395 Slc30a6 protein_coding protein_coding MGP_LPJ_T0048396.1 MGP_LPJ_G0023937.1 mouse_genomes_project 17 77789297 77820950 + MGP_LPJ_P0048396 Slc30a6 protein_coding protein_coding MGP_LPJ_T0045243.1 MGP_LPJ_G0023007.1 mouse_genomes_project 17 2642196 2678725 - MGP_LPJ_P0045243 Tmem242 protein_coding protein_coding MGP_LPJ_T0045245.1 MGP_LPJ_G0023007.1 mouse_genomes_project 17 2670776 2678741 - MGP_LPJ_P0045245 Tmem242 protein_coding protein_coding MGP_LPJ_T0045246.1 MGP_LPJ_G0023007.1 mouse_genomes_project 17 2671506 2678738 - MGP_LPJ_P0045246 Tmem242 protein_coding protein_coding MGP_LPJ_T0099224.1 MGP_LPJ_G0037487.1 mouse_genomes_project 17 47951033 47951140 - Gm22474 snRNA snRNA MGP_LPJ_T0017506.1 MGP_LPJ_G0015265.1 mouse_genomes_project 17 34964372 34979037 - Gm20460 processed_transcript processed_transcript MGP_LPJ_T0045981.1 MGP_LPJ_G0023258.1 mouse_genomes_project 17 24695218 24697501 - MGP_LPJ_P0045981 Tpsab1 protein_coding protein_coding MGP_LPJ_T0045982.1 MGP_LPJ_G0023258.1 mouse_genomes_project 17 24695219 24697536 - Tpsab1 protein_coding processed_transcript MGP_LPJ_T0048284.1 MGP_LPJ_G0023905.1 mouse_genomes_project 17 72230647 72369958 + MGP_LPJ_P0048284 Epb41l3 protein_coding protein_coding MGP_LPJ_T0048285.1 MGP_LPJ_G0023905.1 mouse_genomes_project 17 72230647 72369958 + MGP_LPJ_P0048285 Epb41l3 protein_coding protein_coding MGP_LPJ_T0048286.1 MGP_LPJ_G0023905.1 mouse_genomes_project 17 72279967 72369964 + MGP_LPJ_P0048286 Epb41l3 protein_coding unknown_likely_coding MGP_LPJ_T0003752.1 MGP_LPJ_G0003382.1 mouse_genomes_project 17 31111789 31120515 + Gm15318 antisense antisense MGP_LPJ_T0003753.1 MGP_LPJ_G0003382.1 mouse_genomes_project 17 31111789 31122079 + Gm15318 antisense antisense MGP_LPJ_T0003754.1 MGP_LPJ_G0003382.1 mouse_genomes_project 17 31111789 31121350 + Gm15318 antisense antisense MGP_LPJ_T0045810.1 MGP_LPJ_G0023213.1 mouse_genomes_project 17 23829924 23836443 - MGP_LPJ_P0045810 Rab26 protein_coding protein_coding MGP_LPJ_T0045811.1 MGP_LPJ_G0023213.1 mouse_genomes_project 17 23831777 23836605 - MGP_LPJ_P0045811 Rab26 protein_coding protein_coding MGP_LPJ_T0045812.1 MGP_LPJ_G0023213.1 mouse_genomes_project 17 23831788 23836429 - Rab26 protein_coding retained_intron MGP_LPJ_T0045813.1 MGP_LPJ_G0023213.1 mouse_genomes_project 17 23832044 23832672 - Rab26 protein_coding retained_intron MGP_LPJ_T0045814.1 MGP_LPJ_G0023213.1 mouse_genomes_project 17 23832266 23836927 - MGP_LPJ_P0045814 Rab26 protein_coding protein_coding MGP_LPJ_T0099241.1 MGP_LPJ_G0037504.1 mouse_genomes_project 17 90816894 90817004 - Gm22235 snRNA snRNA MGP_LPJ_T0006956.1 MGP_LPJ_G0005731.1 mouse_genomes_project 17 36301955 36304031 - Gm20443 lincRNA lincRNA MGP_LPJ_T0048219.1 MGP_LPJ_G0023885.1 mouse_genomes_project 17 68107164 68392833 - MGP_LPJ_P0048219 Tmem232 protein_coding protein_coding MGP_LPJ_T0048220.1 MGP_LPJ_G0023885.1 mouse_genomes_project 17 68107166 68392827 - MGP_LPJ_P0048220 Tmem232 protein_coding protein_coding MGP_LPJ_T0006963.1 MGP_LPJ_G0005736.1 mouse_genomes_project 17 38097922 38119796 - Gm20497 lincRNA lincRNA MGP_LPJ_T0048017.1 MGP_LPJ_G0023795.1 mouse_genomes_project 17 54832419 55219135 + MGP_LPJ_P0048017 Kcnh8 protein_coding protein_coding MGP_LPJ_T0048018.1 MGP_LPJ_G0023795.1 mouse_genomes_project 17 55186293 55218320 + Kcnh8 protein_coding retained_intron MGP_LPJ_T0046145.1 MGP_LPJ_G0023295.1 mouse_genomes_project 17 25509624 25513392 - MGP_LPJ_P0046145 Nme4 protein_coding protein_coding MGP_LPJ_T0046146.1 MGP_LPJ_G0023295.1 mouse_genomes_project 17 25511298 25513357 - Nme4 protein_coding retained_intron MGP_LPJ_T0006907.1 MGP_LPJ_G0005690.1 mouse_genomes_project 17 5673019 5687447 - Gm16702 lincRNA lincRNA MGP_LPJ_T0048565.1 MGP_LPJ_G0024004.1 mouse_genomes_project 17 90870921 90960844 + MGP_LPJ_P0048565 Epas1 protein_coding protein_coding MGP_LPJ_T0098404.1 MGP_LPJ_G0036685.1 mouse_genomes_project 17 5351755 5351843 + Gm22416 scaRNA scaRNA MGP_LPJ_T0048397.1 MGP_LPJ_G0023938.1 mouse_genomes_project 17 77822840 77864691 - MGP_LPJ_P0048397 Nlrc4 protein_coding protein_coding MGP_LPJ_T0013241.1 MGP_LPJ_G0011332.1 mouse_genomes_project 17 48832492 48832945 - processed_pseudogene processed_pseudogene MGP_LPJ_T0006942.1 MGP_LPJ_G0005718.1 mouse_genomes_project 17 29258622 29287805 - Gm26885 lincRNA lincRNA MGP_LPJ_T0101502.1 MGP_LPJ_G0039638.1 mouse_genomes_project 17 34784969 34793257 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0101503.1 MGP_LPJ_G0039638.1 mouse_genomes_project 17 34789730 34791465 - transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0046659.1 MGP_LPJ_G0023419.1 mouse_genomes_project 17 32853284 32872453 - MGP_LPJ_P0046659 Zfp871 protein_coding protein_coding MGP_LPJ_T0046660.1 MGP_LPJ_G0023419.1 mouse_genomes_project 17 32859504 32872563 - Zfp871 protein_coding processed_transcript MGP_LPJ_T0100460.1 MGP_LPJ_G0038723.1 mouse_genomes_project 17 120999 121119 - snoRNA snoRNA MGP_LPJ_T0013272.1 MGP_LPJ_G0011363.1 mouse_genomes_project 17 85601354 85601733 - processed_pseudogene processed_pseudogene MGP_LPJ_T0045754.1 MGP_LPJ_G0023201.1 mouse_genomes_project 17 23496017 23525546 - MGP_LPJ_P0045754 Ccnf protein_coding protein_coding MGP_LPJ_T0047002.1 MGP_LPJ_G0023494.1 mouse_genomes_project 17 34981281 34984879 + MGP_LPJ_P0047002 Prrt1 protein_coding protein_coding MGP_LPJ_T0047003.1 MGP_LPJ_G0023494.1 mouse_genomes_project 17 34983152 34984150 + Prrt1 protein_coding retained_intron MGP_LPJ_T0010187.1 MGP_LPJ_G0008305.1 mouse_genomes_project 17 15830631 15830724 + Mirlet7e miRNA miRNA MGP_LPJ_T0045545.1 MGP_LPJ_G0023114.1 mouse_genomes_project 17 18705691 18709714 - MGP_LPJ_P0045545 protein_coding protein_coding MGP_LPJ_T0101955.1 MGP_LPJ_G0039992.1 mouse_genomes_project 17 35656753 35660892 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0006924.1 MGP_LPJ_G0005704.1 mouse_genomes_project 17 22973700 22977385 + D930048G16Rik lincRNA lincRNA MGP_LPJ_T0100478.1 MGP_LPJ_G0038741.1 mouse_genomes_project 17 61717648 61717769 - Gm23769 snoRNA snoRNA MGP_LPJ_T0047748.1 MGP_LPJ_G0023720.1 mouse_genomes_project 17 48022866 48027673 + MGP_LPJ_P0047748 Dlk2 protein_coding protein_coding MGP_LPJ_T0047749.1 MGP_LPJ_G0023720.1 mouse_genomes_project 17 48022866 48029938 + MGP_LPJ_P0047749 Dlk2 protein_coding protein_coding MGP_LPJ_T0047750.1 MGP_LPJ_G0023720.1 mouse_genomes_project 17 48023264 48029945 + MGP_LPJ_P0047750 Dlk2 protein_coding protein_coding MGP_LPJ_T0047047.1 MGP_LPJ_G0023503.1 mouse_genomes_project 17 35279046 35281698 - MGP_LPJ_P0047047 Cfb protein_coding protein_coding MGP_LPJ_T0047048.1 MGP_LPJ_G0023503.1 mouse_genomes_project 17 35279056 35285187 - MGP_LPJ_P0047048 Cfb protein_coding protein_coding MGP_LPJ_T0047049.1 MGP_LPJ_G0023503.1 mouse_genomes_project 17 35279063 35280815 - MGP_LPJ_P0047049 Cfb protein_coding protein_coding MGP_LPJ_T0047050.1 MGP_LPJ_G0023503.1 mouse_genomes_project 17 35279084 35281983 - MGP_LPJ_P0047050 Cfb protein_coding protein_coding MGP_LPJ_T0047053.1 MGP_LPJ_G0023503.1 mouse_genomes_project 17 35279099 35284779 - MGP_LPJ_P0047053 Cfb protein_coding protein_coding MGP_LPJ_T0047054.1 MGP_LPJ_G0023503.1 mouse_genomes_project 17 35279246 35281714 - MGP_LPJ_P0047054 Cfb protein_coding nonsense_mediated_decay MGP_LPJ_T0047576.1 MGP_LPJ_G0023677.1 mouse_genomes_project 17 44162118 44197662 - MGP_LPJ_P0047576 Adgrf4 protein_coding protein_coding MGP_LPJ_T0047577.1 MGP_LPJ_G0023677.1 mouse_genomes_project 17 44162121 44197662 - MGP_LPJ_P0047577 Adgrf4 protein_coding protein_coding MGP_LPJ_T0047578.1 MGP_LPJ_G0023677.1 mouse_genomes_project 17 44162317 44197640 - MGP_LPJ_P0047578 Adgrf4 protein_coding protein_coding MGP_LPJ_T0047579.1 MGP_LPJ_G0023677.1 mouse_genomes_project 17 44177504 44197651 - MGP_LPJ_P0047579 Adgrf4 protein_coding protein_coding MGP_LPJ_T0047631.1 MGP_LPJ_G0023695.1 mouse_genomes_project 17 47046520 47089526 - MGP_LPJ_P0047631 Cdc5l protein_coding protein_coding MGP_LPJ_T0048501.1 MGP_LPJ_G0023978.1 mouse_genomes_project 17 84827297 84867047 - MGP_LPJ_P0048501 Thumpd2 protein_coding protein_coding MGP_LPJ_T0045755.1 MGP_LPJ_G0023202.1 mouse_genomes_project 17 23542938 23637848 - MGP_LPJ_P0045755 Abca17 protein_coding protein_coding MGP_LPJ_T0045756.1 MGP_LPJ_G0023202.1 mouse_genomes_project 17 23542958 23634087 - MGP_LPJ_P0045756 Abca17 protein_coding protein_coding MGP_LPJ_T0045783.1 MGP_LPJ_G0023211.1 mouse_genomes_project 17 23788085 23809727 + MGP_LPJ_P0045783 Caskin1 protein_coding protein_coding MGP_LPJ_T0098202.1 MGP_LPJ_G0036483.1 mouse_genomes_project 17 82204036 82204147 - Gm22562 rRNA rRNA MGP_LPJ_T0047842.1 MGP_LPJ_G0023753.1 mouse_genomes_project 17 49230316 49231709 + MGP_LPJ_P0047842 Gm5814 protein_coding protein_coding MGP_LPJ_T0047584.1 MGP_LPJ_G0023681.1 mouse_genomes_project 17 44794582 44852866 + MGP_LPJ_P0047584 Adgrf1 protein_coding protein_coding MGP_LPJ_T0049992.1 MGP_LPJ_G0024499.1 mouse_genomes_project 18 78615265 78721664 + MGP_LPJ_P0049992 Epg5 protein_coding protein_coding MGP_LPJ_T0007029.1 MGP_LPJ_G0005782.1 mouse_genomes_project 18 32047788 32048883 + Epb41l4aos lincRNA lincRNA MGP_LPJ_T0007030.1 MGP_LPJ_G0005782.1 mouse_genomes_project 18 32047835 32048866 + Epb41l4aos lincRNA lincRNA MGP_LPJ_T0048959.1 MGP_LPJ_G0024113.1 mouse_genomes_project 18 22097070 22186615 + MGP_LPJ_P0048959 Galnt1 protein_coding protein_coding MGP_LPJ_T0048960.1 MGP_LPJ_G0024113.1 mouse_genomes_project 18 22097493 22186607 + MGP_LPJ_P0048960 Galnt1 protein_coding protein_coding MGP_LPJ_T0048961.1 MGP_LPJ_G0024113.1 mouse_genomes_project 18 22097685 22152525 + MGP_LPJ_P0048961 Galnt1 protein_coding protein_coding MGP_LPJ_T0048962.1 MGP_LPJ_G0024113.1 mouse_genomes_project 18 22128328 22186607 + MGP_LPJ_P0048962 Galnt1 protein_coding protein_coding MGP_LPJ_T0048963.1 MGP_LPJ_G0024113.1 mouse_genomes_project 18 22134115 22166672 + MGP_LPJ_P0048963 Galnt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0048964.1 MGP_LPJ_G0024113.1 mouse_genomes_project 18 22142318 22170674 + MGP_LPJ_P0048964 Galnt1 protein_coding nonsense_mediated_decay MGP_LPJ_T0049674.1 MGP_LPJ_G0024407.1 mouse_genomes_project 18 62004816 62009101 + MGP_LPJ_P0049674 Gm9949 protein_coding protein_coding MGP_LPJ_T0099281.1 MGP_LPJ_G0037544.1 mouse_genomes_project 18 85708195 85708351 - Gm25005 snRNA snRNA MGP_LPJ_T0049263.1 MGP_LPJ_G0024248.1 mouse_genomes_project 18 36115099 36116468 - MGP_LPJ_P0049263 Slc25a2 protein_coding protein_coding MGP_LPJ_T0049069.1 MGP_LPJ_G0024160.1 mouse_genomes_project 18 32929980 32938908 + MGP_LPJ_P0049069 Kif20a protein_coding unknown_likely_coding MGP_LPJ_T0100498.1 MGP_LPJ_G0038761.1 mouse_genomes_project 18 24482669 24482800 + Gm23674 snoRNA snoRNA MGP_LPJ_T0049667.1 MGP_LPJ_G0024403.1 mouse_genomes_project 18 61569129 61571140 + Scgb2b27 protein_coding retained_intron MGP_LPJ_T0049668.1 MGP_LPJ_G0024403.1 mouse_genomes_project 18 61569195 61571151 + MGP_LPJ_P0049668 Scgb2b27 protein_coding protein_coding MGP_LPJ_T0049669.1 MGP_LPJ_G0024403.1 mouse_genomes_project 18 61569204 61571102 + MGP_LPJ_P0049669 Scgb2b27 protein_coding protein_coding MGP_LPJ_T0100500.1 MGP_LPJ_G0038763.1 mouse_genomes_project 18 28645232 28645344 + Gm22870 snoRNA snoRNA MGP_LPJ_T0101996.1 MGP_LPJ_G0040033.1 mouse_genomes_project 18 35494781 35495568 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0049258.1 MGP_LPJ_G0024244.1 mouse_genomes_project 18 35979230 35986380 + MGP_LPJ_P0049258 Pcdhb19 protein_coding protein_coding MGP_LPJ_T0049788.1 MGP_LPJ_G0024452.1 mouse_genomes_project 18 68505846 68530226 + MGP_LPJ_P0049788 Rnmt protein_coding protein_coding MGP_LPJ_T0049789.1 MGP_LPJ_G0024452.1 mouse_genomes_project 18 68505883 68514909 + MGP_LPJ_P0049789 Rnmt protein_coding protein_coding MGP_LPJ_T0049790.1 MGP_LPJ_G0024452.1 mouse_genomes_project 18 68505889 68520947 + Rnmt protein_coding retained_intron MGP_LPJ_T0049791.1 MGP_LPJ_G0024452.1 mouse_genomes_project 18 68505891 68527280 + MGP_LPJ_P0049791 Rnmt protein_coding protein_coding MGP_LPJ_T0049792.1 MGP_LPJ_G0024452.1 mouse_genomes_project 18 68505913 68517174 + MGP_LPJ_P0049792 Rnmt protein_coding protein_coding MGP_LPJ_T0049793.1 MGP_LPJ_G0024452.1 mouse_genomes_project 18 68510488 68511686 + MGP_LPJ_P0049793 Rnmt protein_coding protein_coding MGP_LPJ_T0049794.1 MGP_LPJ_G0024452.1 mouse_genomes_project 18 68522833 68524587 + Rnmt protein_coding retained_intron MGP_LPJ_T0049795.1 MGP_LPJ_G0024452.1 mouse_genomes_project 18 68524339 68530225 + Rnmt protein_coding processed_transcript MGP_LPJ_T0010292.1 MGP_LPJ_G0008410.1 mouse_genomes_project 18 90187498 90187579 + Mir6359 miRNA miRNA MGP_LPJ_T0013299.1 MGP_LPJ_G0011390.1 mouse_genomes_project 18 30247202 30247360 + processed_pseudogene processed_pseudogene MGP_LPJ_T0050003.1 MGP_LPJ_G0024507.1 mouse_genomes_project 18 80893892 80919053 - MGP_LPJ_P0050003 Adnp2 protein_coding protein_coding MGP_LPJ_T0098010.1 MGP_LPJ_G0036291.1 mouse_genomes_project 18 7202504 7203017 - pseudogene pseudogene MGP_LPJ_T0049675.1 MGP_LPJ_G0024408.1 mouse_genomes_project 18 62136131 62285103 + MGP_LPJ_P0049675 Htr4 protein_coding protein_coding MGP_LPJ_T0099260.1 MGP_LPJ_G0037523.1 mouse_genomes_project 18 45347158 45347252 - Gm24076 snRNA snRNA MGP_LPJ_T0049257.1 MGP_LPJ_G0024243.1 mouse_genomes_project 18 35971704 35976745 + MGP_LPJ_P0049257 Pcdhb18 protein_coding protein_coding MGP_LPJ_T0048998.1 MGP_LPJ_G0024128.1 mouse_genomes_project 18 29801162 29802402 + MGP_LPJ_P0048998 B930094E09Rik protein_coding protein_coding MGP_LPJ_T0049984.1 MGP_LPJ_G0024495.1 mouse_genomes_project 18 78308675 78394971 - MGP_LPJ_P0049984 8030462N17Rik protein_coding protein_coding MGP_LPJ_T0007027.1 MGP_LPJ_G0005780.1 mouse_genomes_project 18 30900843 31074065 - 4930455D15Rik lincRNA lincRNA MGP_LPJ_T0098213.1 MGP_LPJ_G0036494.1 mouse_genomes_project 18 63386452 63386572 + Gm22560 rRNA rRNA MGP_LPJ_T0049533.1 MGP_LPJ_G0024353.1 mouse_genomes_project 18 52604889 52616610 - MGP_LPJ_P0049533 Ppic protein_coding protein_coding MGP_LPJ_T0049386.1 MGP_LPJ_G0024288.1 mouse_genomes_project 18 38866622 38867346 + MGP_LPJ_P0049386 2900055J20Rik protein_coding protein_coding MGP_LPJ_T0048780.1 MGP_LPJ_G0024049.1 mouse_genomes_project 18 4799839 4857653 + MGP_LPJ_P0048780 Wac protein_coding protein_coding MGP_LPJ_T0048781.1 MGP_LPJ_G0024049.1 mouse_genomes_project 18 4799852 4802696 + MGP_LPJ_P0048781 Wac protein_coding protein_coding MGP_LPJ_T0048782.1 MGP_LPJ_G0024049.1 mouse_genomes_project 18 4800073 4857571 + MGP_LPJ_P0048782 Wac protein_coding protein_coding MGP_LPJ_T0048783.1 MGP_LPJ_G0024049.1 mouse_genomes_project 18 4800203 4802621 + MGP_LPJ_P0048783 Wac protein_coding protein_coding MGP_LPJ_T0048784.1 MGP_LPJ_G0024049.1 mouse_genomes_project 18 4800204 4864707 + MGP_LPJ_P0048784 Wac protein_coding protein_coding MGP_LPJ_T0048785.1 MGP_LPJ_G0024049.1 mouse_genomes_project 18 4800248 4802798 + Wac protein_coding retained_intron MGP_LPJ_T0048786.1 MGP_LPJ_G0024049.1 mouse_genomes_project 18 4800508 4857571 + MGP_LPJ_P0048786 Wac protein_coding protein_coding MGP_LPJ_T0048787.1 MGP_LPJ_G0024049.1 mouse_genomes_project 18 4800537 4851687 + MGP_LPJ_P0048787 Wac protein_coding protein_coding MGP_LPJ_T0048788.1 MGP_LPJ_G0024049.1 mouse_genomes_project 18 4800723 4851880 + MGP_LPJ_P0048788 Wac protein_coding protein_coding MGP_LPJ_T0048789.1 MGP_LPJ_G0024049.1 mouse_genomes_project 18 4800744 4836509 + MGP_LPJ_P0048789 Wac protein_coding protein_coding MGP_LPJ_T0048790.1 MGP_LPJ_G0024049.1 mouse_genomes_project 18 4802719 4857078 + MGP_LPJ_P0048790 Wac protein_coding protein_coding MGP_LPJ_T0048791.1 MGP_LPJ_G0024049.1 mouse_genomes_project 18 4836491 4851887 + MGP_LPJ_P0048791 Wac protein_coding protein_coding MGP_LPJ_T0048792.1 MGP_LPJ_G0024049.1 mouse_genomes_project 18 4846190 4851983 + Wac protein_coding retained_intron MGP_LPJ_T0048793.1 MGP_LPJ_G0024049.1 mouse_genomes_project 18 4846208 4854091 + MGP_LPJ_P0048793 Wac protein_coding protein_coding MGP_LPJ_T0048794.1 MGP_LPJ_G0024049.1 mouse_genomes_project 18 4853226 4907082 + MGP_LPJ_P0048794 Wac protein_coding protein_coding MGP_LPJ_T0099267.1 MGP_LPJ_G0037530.1 mouse_genomes_project 18 60847880 60847985 - Gm26403 snRNA snRNA MGP_LPJ_T0049796.1 MGP_LPJ_G0024453.1 mouse_genomes_project 18 68542368 68544477 + MGP_LPJ_P0049796 Mc5r protein_coding protein_coding MGP_LPJ_T0049339.1 MGP_LPJ_G0024277.1 mouse_genomes_project 18 36751433 36763700 + MGP_LPJ_P0049339 0610009O20Rik protein_coding protein_coding MGP_LPJ_T0007023.1 MGP_LPJ_G0005776.1 mouse_genomes_project 18 29979843 29987605 - Gm26533 lincRNA lincRNA MGP_LPJ_T0049540.1 MGP_LPJ_G0024358.1 mouse_genomes_project 18 55755688 55835591 + MGP_LPJ_P0049540 Gramd3 protein_coding protein_coding MGP_LPJ_T0048717.1 MGP_LPJ_G0024036.1 mouse_genomes_project 18 1307871 1329610 + MGP_LPJ_P0048717 Mtpap protein_coding protein_coding MGP_LPJ_T0011829.1 MGP_LPJ_G0009937.1 mouse_genomes_project 18 36239545 36321810 + MGP_LPJ_P0011829 Pcdhgb8 polymorphic_pseudogene polymorphic_pseudogene MGP_LPJ_T0049568.1 MGP_LPJ_G0024367.1 mouse_genomes_project 18 56864466 56874072 + MGP_LPJ_P0049568 Ctxn3 protein_coding protein_coding MGP_LPJ_T0013289.1 MGP_LPJ_G0011380.1 mouse_genomes_project 18 12427299 12427746 + processed_pseudogene processed_pseudogene MGP_LPJ_T0049633.1 MGP_LPJ_G0024391.1 mouse_genomes_project 18 60748012 60793371 + MGP_LPJ_P0049633 Pdgfrb protein_coding protein_coding MGP_LPJ_T0049634.1 MGP_LPJ_G0024391.1 mouse_genomes_project 18 60748062 60793366 + MGP_LPJ_P0049634 Pdgfrb protein_coding protein_coding MGP_LPJ_T0049635.1 MGP_LPJ_G0024391.1 mouse_genomes_project 18 60748242 60793374 + MGP_LPJ_P0049635 Pdgfrb protein_coding unknown_likely_coding MGP_LPJ_T0013306.1 MGP_LPJ_G0011397.1 mouse_genomes_project 18 37245248 37245362 + processed_pseudogene processed_pseudogene MGP_LPJ_T0007061.1 MGP_LPJ_G0005806.1 mouse_genomes_project 18 83612872 83617409 - 2210420H20Rik lincRNA lincRNA MGP_LPJ_T0013320.1 MGP_LPJ_G0011411.1 mouse_genomes_project 18 55123264 55124242 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010289.1 MGP_LPJ_G0008407.1 mouse_genomes_project 18 81724204 81724290 - Gm25071 miRNA miRNA MGP_LPJ_T0049713.1 MGP_LPJ_G0024422.1 mouse_genomes_project 18 64420636 64438943 - MGP_LPJ_P0049713 Nars protein_coding protein_coding MGP_LPJ_T0010265.1 MGP_LPJ_G0008383.1 mouse_genomes_project 18 39991004 39991095 - Gm44476 miRNA miRNA MGP_LPJ_T0049649.1 MGP_LPJ_G0024398.1 mouse_genomes_project 18 61301578 61337545 + MGP_LPJ_P0049649 Csnk1a1 protein_coding protein_coding MGP_LPJ_T0049650.1 MGP_LPJ_G0024398.1 mouse_genomes_project 18 61301617 61335789 + MGP_LPJ_P0049650 Csnk1a1 protein_coding protein_coding MGP_LPJ_T0049651.1 MGP_LPJ_G0024398.1 mouse_genomes_project 18 61301622 61329606 + MGP_LPJ_P0049651 Csnk1a1 protein_coding protein_coding MGP_LPJ_T0049652.1 MGP_LPJ_G0024398.1 mouse_genomes_project 18 61301622 61333121 + MGP_LPJ_P0049652 Csnk1a1 protein_coding protein_coding MGP_LPJ_T0049653.1 MGP_LPJ_G0024398.1 mouse_genomes_project 18 61301632 61329752 + MGP_LPJ_P0049653 Csnk1a1 protein_coding protein_coding MGP_LPJ_T0049654.1 MGP_LPJ_G0024398.1 mouse_genomes_project 18 61301639 61304543 + Csnk1a1 protein_coding retained_intron MGP_LPJ_T0049655.1 MGP_LPJ_G0024398.1 mouse_genomes_project 18 61301643 61335667 + MGP_LPJ_P0049655 Csnk1a1 protein_coding protein_coding MGP_LPJ_T0049656.1 MGP_LPJ_G0024398.1 mouse_genomes_project 18 61301993 61335017 + MGP_LPJ_P0049656 Csnk1a1 protein_coding protein_coding MGP_LPJ_T0049657.1 MGP_LPJ_G0024398.1 mouse_genomes_project 18 61323018 61329608 + MGP_LPJ_P0049657 Csnk1a1 protein_coding protein_coding MGP_LPJ_T0049658.1 MGP_LPJ_G0024398.1 mouse_genomes_project 18 61330333 61333984 + Csnk1a1 protein_coding processed_transcript MGP_LPJ_T0100493.1 MGP_LPJ_G0038756.1 mouse_genomes_project 18 7619527 7619645 - Gm24894 snoRNA snoRNA MGP_LPJ_T0100521.1 MGP_LPJ_G0038784.1 mouse_genomes_project 18 75536161 75536226 + Gm26202 snoRNA snoRNA MGP_LPJ_T0007047.1 MGP_LPJ_G0005795.1 mouse_genomes_project 18 61396377 61404148 + Bvht lincRNA lincRNA MGP_LPJ_T0007048.1 MGP_LPJ_G0005795.1 mouse_genomes_project 18 61396488 61404328 + Bvht lincRNA lincRNA MGP_LPJ_T0049197.1 MGP_LPJ_G0024203.1 mouse_genomes_project 18 35191928 35204900 + MGP_LPJ_P0049197 Ik protein_coding protein_coding MGP_LPJ_T0049198.1 MGP_LPJ_G0024203.1 mouse_genomes_project 18 35192045 35204903 + MGP_LPJ_P0049198 Ik protein_coding unknown_likely_coding MGP_LPJ_T0003824.1 MGP_LPJ_G0003438.1 mouse_genomes_project 18 36191695 36203520 - Gm37165 antisense antisense MGP_LPJ_T0013287.1 MGP_LPJ_G0011378.1 mouse_genomes_project 18 9767107 9767881 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010282.1 MGP_LPJ_G0008400.1 mouse_genomes_project 18 66270157 66270227 - Mir694 miRNA miRNA MGP_LPJ_T0049315.1 MGP_LPJ_G0024273.1 mouse_genomes_project 18 36441591 36445058 + MGP_LPJ_P0049315 Rell2 protein_coding nonsense_mediated_decay MGP_LPJ_T0049316.1 MGP_LPJ_G0024273.1 mouse_genomes_project 18 36441651 36445058 + MGP_LPJ_P0049316 Rell2 protein_coding nonsense_mediated_decay MGP_LPJ_T0049317.1 MGP_LPJ_G0024273.1 mouse_genomes_project 18 36442100 36444191 + MGP_LPJ_P0049317 Rell2 protein_coding protein_coding MGP_LPJ_T0049318.1 MGP_LPJ_G0024273.1 mouse_genomes_project 18 36442113 36445685 + MGP_LPJ_P0049318 Rell2 protein_coding protein_coding MGP_LPJ_T0049319.1 MGP_LPJ_G0024273.1 mouse_genomes_project 18 36442136 36445676 + MGP_LPJ_P0049319 Rell2 protein_coding protein_coding MGP_LPJ_T0049320.1 MGP_LPJ_G0024273.1 mouse_genomes_project 18 36443205 36444552 + Rell2 protein_coding retained_intron MGP_LPJ_T0049321.1 MGP_LPJ_G0024273.1 mouse_genomes_project 18 36443246 36444682 + Rell2 protein_coding retained_intron MGP_LPJ_T0049271.1 MGP_LPJ_G0024254.1 mouse_genomes_project 18 36162703 36321813 + MGP_LPJ_P0049271 Pcdhga4 protein_coding protein_coding MGP_LPJ_T0049272.1 MGP_LPJ_G0024254.1 mouse_genomes_project 18 36164377 36165273 + MGP_LPJ_P0049272 Pcdhga4 protein_coding protein_coding MGP_LPJ_T0049798.1 MGP_LPJ_G0024455.1 mouse_genomes_project 18 69191382 69196897 - MGP_LPJ_P0049798 4930546C10Rik protein_coding protein_coding MGP_LPJ_T0049907.1 MGP_LPJ_G0024475.1 mouse_genomes_project 18 74769718 74866669 + MGP_LPJ_P0049907 Cfap53 protein_coding protein_coding MGP_LPJ_T0049908.1 MGP_LPJ_G0024475.1 mouse_genomes_project 18 74769750 74866667 + MGP_LPJ_P0049908 Cfap53 protein_coding nonsense_mediated_decay MGP_LPJ_T0049909.1 MGP_LPJ_G0024475.1 mouse_genomes_project 18 74855378 74866613 + Cfap53 protein_coding processed_transcript MGP_LPJ_T0010293.1 MGP_LPJ_G0008411.1 mouse_genomes_project 18 90985408 90985478 + Gm22694 miRNA miRNA MGP_LPJ_T0099247.1 MGP_LPJ_G0037510.1 mouse_genomes_project 18 4763868 4763974 + Gm24292 snRNA snRNA MGP_LPJ_T0099280.1 MGP_LPJ_G0037543.1 mouse_genomes_project 18 84246253 84246419 - Gm24720 snRNA snRNA MGP_LPJ_T0048797.1 MGP_LPJ_G0024052.1 mouse_genomes_project 18 6295447 6437401 - MGP_LPJ_P0048797 Ccny protein_coding protein_coding MGP_LPJ_T0049025.1 MGP_LPJ_G0024146.1 mouse_genomes_project 18 31179572 31426432 + MGP_LPJ_P0049025 Camk4 protein_coding protein_coding MGP_LPJ_T0100517.1 MGP_LPJ_G0038780.1 mouse_genomes_project 18 67617088 67617222 + Gm24900 snoRNA snoRNA MGP_LPJ_T0050089.1 MGP_LPJ_G0024529.1 mouse_genomes_project 18 85912433 85960027 + MGP_LPJ_P0050089 Fbxo15 protein_coding protein_coding MGP_LPJ_T0050091.1 MGP_LPJ_G0024529.1 mouse_genomes_project 18 85930889 85960027 + MGP_LPJ_P0050091 Fbxo15 protein_coding unknown_likely_coding MGP_LPJ_T0049910.1 MGP_LPJ_G0024476.1 mouse_genomes_project 18 74955808 75138358 + MGP_LPJ_P0049910 Myo5b protein_coding protein_coding MGP_LPJ_T0049911.1 MGP_LPJ_G0024476.1 mouse_genomes_project 18 74955836 75029607 + Myo5b protein_coding processed_transcript MGP_LPJ_T0049912.1 MGP_LPJ_G0024476.1 mouse_genomes_project 18 74957415 75285234 + MGP_LPJ_P0049912 Myo5b protein_coding protein_coding MGP_LPJ_T0049913.1 MGP_LPJ_G0024476.1 mouse_genomes_project 18 74957483 75186781 + Myo5b protein_coding processed_transcript MGP_LPJ_T0049914.1 MGP_LPJ_G0024476.1 mouse_genomes_project 18 74957485 75284546 + MGP_LPJ_P0049914 Myo5b protein_coding protein_coding MGP_LPJ_T0049915.1 MGP_LPJ_G0024476.1 mouse_genomes_project 18 75157998 75170256 + Myo5b protein_coding processed_transcript MGP_LPJ_T0049916.1 MGP_LPJ_G0024476.1 mouse_genomes_project 18 75234357 75244012 + Myo5b protein_coding processed_transcript MGP_LPJ_T0049917.1 MGP_LPJ_G0024476.1 mouse_genomes_project 18 75240484 75244005 + MGP_LPJ_P0049917 Myo5b protein_coding protein_coding MGP_LPJ_T0049918.1 MGP_LPJ_G0024476.1 mouse_genomes_project 18 75241750 75244003 + Myo5b protein_coding retained_intron MGP_LPJ_T0049919.1 MGP_LPJ_G0024476.1 mouse_genomes_project 18 75242539 75249392 + Myo5b protein_coding processed_transcript MGP_LPJ_T0049920.1 MGP_LPJ_G0024476.1 mouse_genomes_project 18 75260614 75285218 + Myo5b protein_coding retained_intron MGP_LPJ_T0003847.1 MGP_LPJ_G0003453.1 mouse_genomes_project 18 75044261 75050326 - 1700120E14Rik antisense antisense MGP_LPJ_T0003848.1 MGP_LPJ_G0003453.1 mouse_genomes_project 18 75044374 75050308 - 1700120E14Rik antisense antisense MGP_LPJ_T0003822.1 MGP_LPJ_G0003436.1 mouse_genomes_project 18 35908770 35912914 - Gm37446 antisense antisense MGP_LPJ_T0049022.1 MGP_LPJ_G0024144.1 mouse_genomes_project 18 31050400 31054818 + MGP_LPJ_P0049022 Tslp protein_coding protein_coding MGP_LPJ_T0049267.1 MGP_LPJ_G0024251.1 mouse_genomes_project 18 36145974 36321810 + MGP_LPJ_P0049267 Pcdhga2 protein_coding protein_coding MGP_LPJ_T0049053.1 MGP_LPJ_G0024155.1 mouse_genomes_project 18 32736510 32803195 - MGP_LPJ_P0049053 Fam13b protein_coding protein_coding MGP_LPJ_T0049385.1 MGP_LPJ_G0024287.1 mouse_genomes_project 18 38803020 38822693 - MGP_LPJ_P0049385 Yipf5 protein_coding protein_coding MGP_LPJ_T0010261.1 MGP_LPJ_G0008379.1 mouse_genomes_project 18 35260155 35260265 + Gm23424 miRNA miRNA MGP_LPJ_T0049884.1 MGP_LPJ_G0024466.1 mouse_genomes_project 18 74104487 74166564 - MGP_LPJ_P0049884 Smad4 protein_coding protein_coding MGP_LPJ_T0049885.1 MGP_LPJ_G0024466.1 mouse_genomes_project 18 74105478 74144421 - MGP_LPJ_P0049885 Smad4 protein_coding protein_coding MGP_LPJ_T0049886.1 MGP_LPJ_G0024466.1 mouse_genomes_project 18 74105635 74108041 - Smad4 protein_coding processed_transcript MGP_LPJ_T0049887.1 MGP_LPJ_G0024466.1 mouse_genomes_project 18 74105689 74115295 - Smad4 protein_coding processed_transcript MGP_LPJ_T0049888.1 MGP_LPJ_G0024466.1 mouse_genomes_project 18 74105700 74128833 - Smad4 protein_coding processed_transcript MGP_LPJ_T0049889.1 MGP_LPJ_G0024466.1 mouse_genomes_project 18 74124769 74141308 - Smad4 protein_coding processed_transcript MGP_LPJ_T0099249.1 MGP_LPJ_G0037512.1 mouse_genomes_project 18 7208911 7209075 - Gm26244 snRNA snRNA MGP_LPJ_T0098406.1 MGP_LPJ_G0036687.1 mouse_genomes_project 18 75292262 75292402 - Gm23119 scaRNA scaRNA MGP_LPJ_T0049522.1 MGP_LPJ_G0024349.1 mouse_genomes_project 18 51854465 51856455 + MGP_LPJ_P0049522 Gykl1 protein_coding protein_coding MGP_LPJ_T0099252.1 MGP_LPJ_G0037515.1 mouse_genomes_project 18 18590953 18591102 - Gm24959 snRNA snRNA MGP_LPJ_T0049148.1 MGP_LPJ_G0024188.1 mouse_genomes_project 18 34359329 34411585 + MGP_LPJ_P0049148 Psd2 protein_coding protein_coding MGP_LPJ_T0049149.1 MGP_LPJ_G0024188.1 mouse_genomes_project 18 34359564 34411585 + MGP_LPJ_P0049149 Psd2 protein_coding protein_coding MGP_LPJ_T0049150.1 MGP_LPJ_G0024188.1 mouse_genomes_project 18 34359566 34411588 + MGP_LPJ_P0049150 Psd2 protein_coding protein_coding MGP_LPJ_T0049151.1 MGP_LPJ_G0024188.1 mouse_genomes_project 18 34359601 34411453 + MGP_LPJ_P0049151 Psd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0049152.1 MGP_LPJ_G0024188.1 mouse_genomes_project 18 34359604 34411547 + MGP_LPJ_P0049152 Psd2 protein_coding protein_coding MGP_LPJ_T0049153.1 MGP_LPJ_G0024188.1 mouse_genomes_project 18 34383155 34402121 + Psd2 protein_coding retained_intron MGP_LPJ_T0049678.1 MGP_LPJ_G0024411.1 mouse_genomes_project 18 62431330 62568463 - MGP_LPJ_P0049678 Spink13 protein_coding protein_coding MGP_LPJ_T0048988.1 MGP_LPJ_G0024124.1 mouse_genomes_project 18 28423284 28498837 + MGP_LPJ_P0048988 Pik3c3 protein_coding protein_coding MGP_LPJ_T0048989.1 MGP_LPJ_G0024124.1 mouse_genomes_project 18 28423407 28481679 + MGP_LPJ_P0048989 Pik3c3 protein_coding protein_coding MGP_LPJ_T0048990.1 MGP_LPJ_G0024124.1 mouse_genomes_project 18 28423409 28493827 + MGP_LPJ_P0048990 Pik3c3 protein_coding protein_coding MGP_LPJ_T0048991.1 MGP_LPJ_G0024124.1 mouse_genomes_project 18 28423464 28498831 + MGP_LPJ_P0048991 Pik3c3 protein_coding nonsense_mediated_decay MGP_LPJ_T0010275.1 MGP_LPJ_G0008393.1 mouse_genomes_project 18 60656055 60656123 + Mir6982 miRNA miRNA MGP_LPJ_T0013322.1 MGP_LPJ_G0011413.1 mouse_genomes_project 18 59821829 59823032 + processed_pseudogene processed_pseudogene MGP_LPJ_T0049693.1 MGP_LPJ_G0024416.1 mouse_genomes_project 18 62859172 63266928 - MGP_LPJ_P0049693 Piezo2 protein_coding protein_coding MGP_LPJ_T0049694.1 MGP_LPJ_G0024416.1 mouse_genomes_project 18 62859175 62883287 - MGP_LPJ_P0049694 Piezo2 protein_coding nonsense_mediated_decay MGP_LPJ_T0049695.1 MGP_LPJ_G0024416.1 mouse_genomes_project 18 62860507 63104271 - MGP_LPJ_P0049695 Piezo2 protein_coding unknown_likely_coding MGP_LPJ_T0049696.1 MGP_LPJ_G0024416.1 mouse_genomes_project 18 62871358 62880957 - Piezo2 protein_coding retained_intron MGP_LPJ_T0049697.1 MGP_LPJ_G0024416.1 mouse_genomes_project 18 62871805 62887053 - Piezo2 protein_coding retained_intron MGP_LPJ_T0049698.1 MGP_LPJ_G0024416.1 mouse_genomes_project 18 62908324 63266202 - MGP_LPJ_P0049698 Piezo2 protein_coding protein_coding MGP_LPJ_T0049699.1 MGP_LPJ_G0024416.1 mouse_genomes_project 18 62928628 62997831 - MGP_LPJ_P0049699 Piezo2 protein_coding protein_coding MGP_LPJ_T0049700.1 MGP_LPJ_G0024416.1 mouse_genomes_project 18 62959302 63036538 - MGP_LPJ_P0049700 Piezo2 protein_coding protein_coding MGP_LPJ_T0049701.1 MGP_LPJ_G0024416.1 mouse_genomes_project 18 62959352 63266928 - MGP_LPJ_P0049701 Piezo2 protein_coding protein_coding MGP_LPJ_T0049702.1 MGP_LPJ_G0024416.1 mouse_genomes_project 18 62973345 63266914 - Piezo2 protein_coding retained_intron MGP_LPJ_T0049002.1 MGP_LPJ_G0024131.1 mouse_genomes_project 18 29987718 29995353 + MGP_LPJ_P0049002 Polr2d protein_coding protein_coding MGP_LPJ_T0100495.1 MGP_LPJ_G0038758.1 mouse_genomes_project 18 13322610 13322739 + Gm24228 snoRNA snoRNA MGP_LPJ_T0049019.1 MGP_LPJ_G0024143.1 mouse_genomes_project 18 30764871 30797468 - MGP_LPJ_P0049019 Gypc protein_coding protein_coding MGP_LPJ_T0049020.1 MGP_LPJ_G0024143.1 mouse_genomes_project 18 30764874 30797414 - MGP_LPJ_P0049020 Gypc protein_coding protein_coding MGP_LPJ_T0049021.1 MGP_LPJ_G0024143.1 mouse_genomes_project 18 30766341 30771984 - MGP_LPJ_P0049021 Gypc protein_coding protein_coding MGP_LPJ_T0049861.1 MGP_LPJ_G0024458.1 mouse_genomes_project 18 70297585 70458338 - MGP_LPJ_P0049861 Rab27b protein_coding protein_coding MGP_LPJ_T0049862.1 MGP_LPJ_G0024458.1 mouse_genomes_project 18 70302110 70368225 - MGP_LPJ_P0049862 Rab27b protein_coding protein_coding MGP_LPJ_T0049863.1 MGP_LPJ_G0024458.1 mouse_genomes_project 18 70302110 70368225 - MGP_LPJ_P0049863 Rab27b protein_coding protein_coding MGP_LPJ_T0049864.1 MGP_LPJ_G0024458.1 mouse_genomes_project 18 70454896 70458307 - Rab27b protein_coding retained_intron MGP_LPJ_T0013286.1 MGP_LPJ_G0011377.1 mouse_genomes_project 18 9553512 9557602 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099250.1 MGP_LPJ_G0037513.1 mouse_genomes_project 18 9414804 9414922 + Gm25289 snRNA snRNA MGP_LPJ_T0049166.1 MGP_LPJ_G0024194.1 mouse_genomes_project 18 34950091 34965988 + MGP_LPJ_P0049166 Slc4a9 protein_coding protein_coding MGP_LPJ_T0049167.1 MGP_LPJ_G0024194.1 mouse_genomes_project 18 34950091 34965988 + MGP_LPJ_P0049167 Slc4a9 protein_coding protein_coding MGP_LPJ_T0011478.1 MGP_LPJ_G0009596.1 mouse_genomes_project 18 59283584 59283878 - Gm26028 misc_RNA misc_RNA MGP_LPJ_T0049427.1 MGP_LPJ_G0024311.1 mouse_genomes_project 18 42922157 42926096 - MGP_LPJ_P0049427 Gm10267 protein_coding protein_coding MGP_LPJ_T0049428.1 MGP_LPJ_G0024311.1 mouse_genomes_project 18 42922166 42925534 - MGP_LPJ_P0049428 Gm10267 protein_coding protein_coding MGP_LPJ_T0049890.1 MGP_LPJ_G0024467.1 mouse_genomes_project 18 74201284 74220782 - MGP_LPJ_P0049890 Elac1 protein_coding protein_coding MGP_LPJ_T0050069.1 MGP_LPJ_G0024524.1 mouse_genomes_project 18 85070997 85520789 - MGP_LPJ_P0050069 Zfp407 protein_coding protein_coding MGP_LPJ_T0050070.1 MGP_LPJ_G0024524.1 mouse_genomes_project 18 85152150 85551593 - MGP_LPJ_P0050070 Zfp407 protein_coding protein_coding MGP_LPJ_T0050071.1 MGP_LPJ_G0024524.1 mouse_genomes_project 18 85225053 85367790 - Zfp407 protein_coding processed_transcript MGP_LPJ_T0050072.1 MGP_LPJ_G0024524.1 mouse_genomes_project 18 85385337 85391079 - Zfp407 protein_coding retained_intron MGP_LPJ_T0050073.1 MGP_LPJ_G0024524.1 mouse_genomes_project 18 85454037 85520739 - Zfp407 protein_coding processed_transcript MGP_LPJ_T0050074.1 MGP_LPJ_G0024524.1 mouse_genomes_project 18 85515268 85551814 - Zfp407 protein_coding processed_transcript MGP_LPJ_T0049648.1 MGP_LPJ_G0024397.1 mouse_genomes_project 18 61234903 61281606 - MGP_LPJ_P0049648 Arhgef37 protein_coding protein_coding MGP_LPJ_T0049459.1 MGP_LPJ_G0024325.1 mouse_genomes_project 18 45439115 45456847 - MGP_LPJ_P0049459 Ticam2 protein_coding protein_coding MGP_LPJ_T0049461.1 MGP_LPJ_G0024325.1 mouse_genomes_project 18 45453526 45456847 - Ticam2 protein_coding retained_intron MGP_LPJ_T0017581.1 MGP_LPJ_G0015283.1 mouse_genomes_project 18 56902696 56932667 - 1700066O22Rik processed_transcript processed_transcript MGP_LPJ_T0017582.1 MGP_LPJ_G0015283.1 mouse_genomes_project 18 56904431 56932643 - 1700066O22Rik processed_transcript processed_transcript MGP_LPJ_T0017584.1 MGP_LPJ_G0015283.1 mouse_genomes_project 18 56914619 56932654 - 1700066O22Rik processed_transcript processed_transcript MGP_LPJ_T0017585.1 MGP_LPJ_G0015283.1 mouse_genomes_project 18 56914630 56932631 - 1700066O22Rik processed_transcript processed_transcript MGP_LPJ_T0017586.1 MGP_LPJ_G0015283.1 mouse_genomes_project 18 56929350 56932638 - 1700066O22Rik processed_transcript processed_transcript MGP_LPJ_T0099255.1 MGP_LPJ_G0037518.1 mouse_genomes_project 18 31246300 31246404 - Gm22814 snRNA snRNA MGP_LPJ_T0007010.1 MGP_LPJ_G0005767.1 mouse_genomes_project 18 1305948 1312260 - Gm26865 lincRNA lincRNA MGP_LPJ_T0003849.1 MGP_LPJ_G0003454.1 mouse_genomes_project 18 81108625 81111898 + Gm26676 antisense antisense MGP_LPJ_T0013307.1 MGP_LPJ_G0011398.1 mouse_genomes_project 18 37249926 37250527 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099270.1 MGP_LPJ_G0037533.1 mouse_genomes_project 18 63454674 63454779 + Gm24848 snRNA snRNA MGP_LPJ_T0098217.1 MGP_LPJ_G0036498.1 mouse_genomes_project 18 75558248 75558340 + Gm27781 rRNA rRNA MGP_LPJ_T0049538.1 MGP_LPJ_G0024356.1 mouse_genomes_project 18 53070559 53166386 + MGP_LPJ_P0049538 Csnk1g3 protein_coding protein_coding MGP_LPJ_T0049597.1 MGP_LPJ_G0024382.1 mouse_genomes_project 18 60266190 60296280 - MGP_LPJ_P0049597 Synpo protein_coding protein_coding MGP_LPJ_T0049598.1 MGP_LPJ_G0024382.1 mouse_genomes_project 18 60266199 60296517 - MGP_LPJ_P0049598 Synpo protein_coding protein_coding MGP_LPJ_T0049599.1 MGP_LPJ_G0024382.1 mouse_genomes_project 18 60266207 60301801 - MGP_LPJ_P0049599 Synpo protein_coding protein_coding MGP_LPJ_T0049600.1 MGP_LPJ_G0024382.1 mouse_genomes_project 18 60266208 60272564 - Synpo protein_coding processed_transcript MGP_LPJ_T0049601.1 MGP_LPJ_G0024382.1 mouse_genomes_project 18 60272272 60296180 - MGP_LPJ_P0049601 Synpo protein_coding protein_coding MGP_LPJ_T0049602.1 MGP_LPJ_G0024382.1 mouse_genomes_project 18 60272273 60282167 - MGP_LPJ_P0049602 Synpo protein_coding protein_coding MGP_LPJ_T0049603.1 MGP_LPJ_G0024382.1 mouse_genomes_project 18 60272275 60322448 - MGP_LPJ_P0049603 Synpo protein_coding protein_coding MGP_LPJ_T0049604.1 MGP_LPJ_G0024382.1 mouse_genomes_project 18 60276175 60295269 - MGP_LPJ_P0049604 Synpo protein_coding protein_coding MGP_LPJ_T0049605.1 MGP_LPJ_G0024382.1 mouse_genomes_project 18 60276326 60296206 - Synpo protein_coding processed_transcript MGP_LPJ_T0049606.1 MGP_LPJ_G0024382.1 mouse_genomes_project 18 60277949 60336642 - Synpo protein_coding processed_transcript MGP_LPJ_T0049607.1 MGP_LPJ_G0024382.1 mouse_genomes_project 18 60301445 60322401 - Synpo protein_coding processed_transcript MGP_LPJ_T0049608.1 MGP_LPJ_G0024382.1 mouse_genomes_project 18 60319405 60322401 - Synpo protein_coding processed_transcript MGP_LPJ_T0048992.1 MGP_LPJ_G0024125.1 mouse_genomes_project 18 29132890 29496002 - MGP_LPJ_P0048992 Rit2 protein_coding nonsense_mediated_decay MGP_LPJ_T0048993.1 MGP_LPJ_G0024125.1 mouse_genomes_project 18 29133716 29495845 - MGP_LPJ_P0048993 Rit2 protein_coding protein_coding MGP_LPJ_T0048994.1 MGP_LPJ_G0024125.1 mouse_genomes_project 18 29324019 29388397 - Rit2 protein_coding processed_transcript MGP_LPJ_T0048995.1 MGP_LPJ_G0024125.1 mouse_genomes_project 18 29381878 29495823 - MGP_LPJ_P0048995 Rit2 protein_coding protein_coding MGP_LPJ_T0001034.1 MGP_LPJ_G0000959.1 mouse_genomes_project 18 33942595 33944755 + TEC TEC MGP_LPJ_T0049955.1 MGP_LPJ_G0024489.1 mouse_genomes_project 18 77584069 77659834 - MGP_LPJ_P0049955 Katnal2 protein_coding protein_coding MGP_LPJ_T0049956.1 MGP_LPJ_G0024489.1 mouse_genomes_project 18 77584070 77659769 - MGP_LPJ_P0049956 Katnal2 protein_coding nonsense_mediated_decay MGP_LPJ_T0049957.1 MGP_LPJ_G0024489.1 mouse_genomes_project 18 77584070 77659812 - MGP_LPJ_P0049957 Katnal2 protein_coding nonsense_mediated_decay MGP_LPJ_T0049958.1 MGP_LPJ_G0024489.1 mouse_genomes_project 18 77584078 77659769 - MGP_LPJ_P0049958 Katnal2 protein_coding protein_coding MGP_LPJ_T0049959.1 MGP_LPJ_G0024489.1 mouse_genomes_project 18 77584307 77634870 - MGP_LPJ_P0049959 Katnal2 protein_coding protein_coding MGP_LPJ_T0049960.1 MGP_LPJ_G0024489.1 mouse_genomes_project 18 77585371 77613609 - Katnal2 protein_coding processed_transcript MGP_LPJ_T0049961.1 MGP_LPJ_G0024489.1 mouse_genomes_project 18 77600018 77659822 - MGP_LPJ_P0049961 Katnal2 protein_coding protein_coding MGP_LPJ_T0049962.1 MGP_LPJ_G0024489.1 mouse_genomes_project 18 77608538 77618761 - Katnal2 protein_coding processed_transcript MGP_LPJ_T0049963.1 MGP_LPJ_G0024489.1 mouse_genomes_project 18 77609280 77614939 - Katnal2 protein_coding retained_intron MGP_LPJ_T0049964.1 MGP_LPJ_G0024489.1 mouse_genomes_project 18 77616777 77659813 - MGP_LPJ_P0049964 Katnal2 protein_coding protein_coding MGP_LPJ_T0049965.1 MGP_LPJ_G0024489.1 mouse_genomes_project 18 77617261 77659824 - MGP_LPJ_P0049965 Katnal2 protein_coding protein_coding MGP_LPJ_T0049677.1 MGP_LPJ_G0024410.1 mouse_genomes_project 18 62416414 62420266 - MGP_LPJ_P0049677 Spink7 protein_coding protein_coding MGP_LPJ_T0049511.1 MGP_LPJ_G0024340.1 mouse_genomes_project 18 49322993 49327644 + MGP_LPJ_P0049511 Fam170a protein_coding protein_coding MGP_LPJ_T0048809.1 MGP_LPJ_G0024058.1 mouse_genomes_project 18 7106660 7241488 - MGP_LPJ_P0048809 Rock1 protein_coding protein_coding MGP_LPJ_T0049941.1 MGP_LPJ_G0024487.1 mouse_genomes_project 18 77535026 77548499 + MGP_LPJ_P0049941 Ier3ip1 protein_coding protein_coding MGP_LPJ_T0049942.1 MGP_LPJ_G0024487.1 mouse_genomes_project 18 77535054 77548499 + Ier3ip1 protein_coding processed_transcript MGP_LPJ_T0049943.1 MGP_LPJ_G0024487.1 mouse_genomes_project 18 77535072 77546651 + Ier3ip1 protein_coding retained_intron MGP_LPJ_T0049945.1 MGP_LPJ_G0024487.1 mouse_genomes_project 18 77546187 77547585 + Ier3ip1 protein_coding retained_intron MGP_LPJ_T0013327.1 MGP_LPJ_G0011418.1 mouse_genomes_project 18 80609753 80610749 - processed_pseudogene processed_pseudogene MGP_LPJ_T0050042.1 MGP_LPJ_G0024517.1 mouse_genomes_project 18 81765108 81786893 - MGP_LPJ_P0050042 Sall3 protein_coding protein_coding MGP_LPJ_T0017569.1 MGP_LPJ_G0015278.1 mouse_genomes_project 18 36302175 36320140 + Gm38182 processed_transcript processed_transcript MGP_LPJ_T0017570.1 MGP_LPJ_G0015278.1 mouse_genomes_project 18 36302444 36319998 + Gm38182 processed_transcript processed_transcript MGP_LPJ_T0017571.1 MGP_LPJ_G0015278.1 mouse_genomes_project 18 36302655 36320319 + Gm38182 processed_transcript processed_transcript MGP_LPJ_T0017572.1 MGP_LPJ_G0015278.1 mouse_genomes_project 18 36302740 36320322 + Gm38182 processed_transcript processed_transcript MGP_LPJ_T0017573.1 MGP_LPJ_G0015278.1 mouse_genomes_project 18 36303033 36320320 + Gm38182 processed_transcript processed_transcript MGP_LPJ_T0048733.1 MGP_LPJ_G0024039.1 mouse_genomes_project 18 2166771 2291898 - MGP_LPJ_P0048733 Zfp438 protein_coding protein_coding MGP_LPJ_T0013292.1 MGP_LPJ_G0011383.1 mouse_genomes_project 18 18862401 18862845 - processed_pseudogene processed_pseudogene MGP_LPJ_T0049005.1 MGP_LPJ_G0024133.1 mouse_genomes_project 18 30020095 30020636 - MGP_LPJ_P0049005 Gm6665 protein_coding protein_coding MGP_LPJ_T0100494.1 MGP_LPJ_G0038757.1 mouse_genomes_project 18 7826825 7826947 + Gm25116 snoRNA snoRNA MGP_LPJ_T0049088.1 MGP_LPJ_G0024169.1 mouse_genomes_project 18 33230914 33263988 - MGP_LPJ_P0049088 Etf1 protein_coding protein_coding MGP_LPJ_T0049089.1 MGP_LPJ_G0024169.1 mouse_genomes_project 18 33263814 33263922 - MGP_LPJ_P0049089 Etf1 protein_coding protein_coding MGP_LPJ_T0049159.1 MGP_LPJ_G0024191.1 mouse_genomes_project 18 34768585 34789532 + MGP_LPJ_P0049159 Cystm1 protein_coding protein_coding MGP_LPJ_T0049160.1 MGP_LPJ_G0024191.1 mouse_genomes_project 18 34771517 34827819 + MGP_LPJ_P0049160 Cystm1 protein_coding protein_coding MGP_LPJ_T0049161.1 MGP_LPJ_G0024191.1 mouse_genomes_project 18 34771583 34791067 + Cystm1 protein_coding retained_intron MGP_LPJ_T0049162.1 MGP_LPJ_G0024191.1 mouse_genomes_project 18 34771594 34817513 + MGP_LPJ_P0049162 Cystm1 protein_coding protein_coding MGP_LPJ_T0049163.1 MGP_LPJ_G0024191.1 mouse_genomes_project 18 34788592 34827379 + MGP_LPJ_P0049163 Cystm1 protein_coding protein_coding MGP_LPJ_T0049772.1 MGP_LPJ_G0024443.1 mouse_genomes_project 18 67619586 67635125 + MGP_LPJ_P0049772 Slmo1 protein_coding protein_coding MGP_LPJ_T0049388.1 MGP_LPJ_G0024290.1 mouse_genomes_project 18 40531449 40621852 - MGP_LPJ_P0049388 Prelid2 protein_coding protein_coding MGP_LPJ_T0049870.1 MGP_LPJ_G0024462.1 mouse_genomes_project 18 70835884 70856423 - MGP_LPJ_P0049870 Poli protein_coding protein_coding MGP_LPJ_T0049871.1 MGP_LPJ_G0024462.1 mouse_genomes_project 18 70835887 70856907 - MGP_LPJ_P0049871 Poli protein_coding protein_coding MGP_LPJ_T0049872.1 MGP_LPJ_G0024462.1 mouse_genomes_project 18 70835888 70856719 - MGP_LPJ_P0049872 Poli protein_coding protein_coding MGP_LPJ_T0049873.1 MGP_LPJ_G0024462.1 mouse_genomes_project 18 70835889 70856423 - MGP_LPJ_P0049873 Poli protein_coding protein_coding MGP_LPJ_T0049874.1 MGP_LPJ_G0024462.1 mouse_genomes_project 18 70835891 70856553 - MGP_LPJ_P0049874 Poli protein_coding nonsense_mediated_decay MGP_LPJ_T0048967.1 MGP_LPJ_G0024116.1 mouse_genomes_project 18 22501770 22526728 - MGP_LPJ_P0048967 Slc39a6 protein_coding protein_coding MGP_LPJ_T0048968.1 MGP_LPJ_G0024116.1 mouse_genomes_project 18 22504164 22526426 - MGP_LPJ_P0048968 Slc39a6 protein_coding protein_coding MGP_LPJ_T0048969.1 MGP_LPJ_G0024116.1 mouse_genomes_project 18 22519227 22522331 - Slc39a6 protein_coding retained_intron MGP_LPJ_T0048970.1 MGP_LPJ_G0024116.1 mouse_genomes_project 18 22524395 22526204 - MGP_LPJ_P0048970 Slc39a6 protein_coding protein_coding MGP_LPJ_T0049216.1 MGP_LPJ_G0024211.1 mouse_genomes_project 18 35408491 35676922 + MGP_LPJ_P0049216 Pcdha3 protein_coding protein_coding MGP_LPJ_T0007041.1 MGP_LPJ_G0005790.1 mouse_genomes_project 18 48815608 48831195 - 1700065O20Rik lincRNA lincRNA MGP_LPJ_T0049925.1 MGP_LPJ_G0024480.1 mouse_genomes_project 18 75540190 75544250 + MGP_LPJ_P0049925 BC031181 protein_coding protein_coding MGP_LPJ_T0048799.1 MGP_LPJ_G0024054.1 mouse_genomes_project 18 6707349 6892189 + MGP_LPJ_P0048799 Colec12 protein_coding protein_coding MGP_LPJ_T0049147.1 MGP_LPJ_G0024187.1 mouse_genomes_project 18 34215421 34247025 + MGP_LPJ_P0049147 Cxxc5 protein_coding protein_coding MGP_LPJ_T0048824.1 MGP_LPJ_G0024062.1 mouse_genomes_project 18 7721289 7737109 - MGP_LPJ_P0048824 Abhd3 protein_coding protein_coding MGP_LPJ_T0048825.1 MGP_LPJ_G0024062.1 mouse_genomes_project 18 7721933 7774286 - MGP_LPJ_P0048825 Abhd3 protein_coding protein_coding MGP_LPJ_T0049530.1 MGP_LPJ_G0024351.1 mouse_genomes_project 18 52372412 52419196 + MGP_LPJ_P0049530 Snx2 protein_coding protein_coding MGP_LPJ_T0049639.1 MGP_LPJ_G0024394.1 mouse_genomes_project 18 60903885 60923602 - MGP_LPJ_P0049639 Slc26a2 protein_coding protein_coding MGP_LPJ_T0049640.1 MGP_LPJ_G0024394.1 mouse_genomes_project 18 60909222 60912359 - MGP_LPJ_P0049640 Slc26a2 protein_coding protein_coding MGP_LPJ_T0049641.1 MGP_LPJ_G0024394.1 mouse_genomes_project 18 60913694 60923370 - MGP_LPJ_P0049641 Slc26a2 protein_coding protein_coding MGP_LPJ_T0049642.1 MGP_LPJ_G0024394.1 mouse_genomes_project 18 60919179 60923347 - Slc26a2 protein_coding retained_intron MGP_LPJ_T0049429.1 MGP_LPJ_G0024312.1 mouse_genomes_project 18 42932603 42940086 - MGP_LPJ_P0049429 Spinkl protein_coding protein_coding MGP_LPJ_T0049136.1 MGP_LPJ_G0024183.1 mouse_genomes_project 18 34085456 34114031 + 1700066B19Rik protein_coding processed_transcript MGP_LPJ_T0049143.1 MGP_LPJ_G0024183.1 mouse_genomes_project 18 34110581 34115130 + MGP_LPJ_P0049143 1700066B19Rik protein_coding protein_coding MGP_LPJ_T0010263.1 MGP_LPJ_G0008381.1 mouse_genomes_project 18 36461016 36461131 - Mir6981 miRNA miRNA MGP_LPJ_T0050080.1 MGP_LPJ_G0024527.1 mouse_genomes_project 18 85684342 85695597 + MGP_LPJ_P0050080 Fam69c protein_coding protein_coding MGP_LPJ_T0050081.1 MGP_LPJ_G0024527.1 mouse_genomes_project 18 85684565 85706469 + MGP_LPJ_P0050081 Fam69c protein_coding protein_coding MGP_LPJ_T0050082.1 MGP_LPJ_G0024527.1 mouse_genomes_project 18 85684600 85705447 + Fam69c protein_coding processed_transcript MGP_LPJ_T0050083.1 MGP_LPJ_G0024527.1 mouse_genomes_project 18 85685206 85695374 + Fam69c protein_coding processed_transcript MGP_LPJ_T0017590.1 MGP_LPJ_G0015284.1 mouse_genomes_project 18 66350344 66380204 + Gm15958 processed_transcript processed_transcript MGP_LPJ_T0017591.1 MGP_LPJ_G0015284.1 mouse_genomes_project 18 66350957 66372937 + Gm15958 processed_transcript processed_transcript MGP_LPJ_T0049237.1 MGP_LPJ_G0024226.1 mouse_genomes_project 18 35753406 35755994 + MGP_LPJ_P0049237 Pcdhb1 protein_coding protein_coding MGP_LPJ_T0049994.1 MGP_LPJ_G0024501.1 mouse_genomes_project 18 78790276 78814365 - MGP_LPJ_P0049994 Slc14a1 protein_coding protein_coding MGP_LPJ_T0049995.1 MGP_LPJ_G0024501.1 mouse_genomes_project 18 78791835 78836626 - MGP_LPJ_P0049995 Slc14a1 protein_coding protein_coding MGP_LPJ_T0049996.1 MGP_LPJ_G0024501.1 mouse_genomes_project 18 78791835 78814270 - MGP_LPJ_P0049996 Slc14a1 protein_coding protein_coding MGP_LPJ_T0049434.1 MGP_LPJ_G0024316.1 mouse_genomes_project 18 43103219 43124744 + MGP_LPJ_P0049434 Myot protein_coding protein_coding MGP_LPJ_T0049435.1 MGP_LPJ_G0024316.1 mouse_genomes_project 18 43103219 43124744 + MGP_LPJ_P0049435 Myot protein_coding protein_coding MGP_LPJ_T0011469.1 MGP_LPJ_G0009587.1 mouse_genomes_project 18 35250272 35250415 + Vaultrc5 misc_RNA misc_RNA MGP_LPJ_T0049875.1 MGP_LPJ_G0024463.1 mouse_genomes_project 18 70900287 70961546 + MGP_LPJ_P0049875 Mbd2 protein_coding protein_coding MGP_LPJ_T0049876.1 MGP_LPJ_G0024463.1 mouse_genomes_project 18 70900432 70917401 + MGP_LPJ_P0049876 Mbd2 protein_coding protein_coding MGP_LPJ_T0049877.1 MGP_LPJ_G0024463.1 mouse_genomes_project 18 70915287 70958208 + MGP_LPJ_P0049877 Mbd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0049878.1 MGP_LPJ_G0024463.1 mouse_genomes_project 18 70927734 70952716 + Mbd2 protein_coding retained_intron MGP_LPJ_T0049879.1 MGP_LPJ_G0024463.1 mouse_genomes_project 18 70953255 70961192 + Mbd2 protein_coding retained_intron MGP_LPJ_T0011481.1 MGP_LPJ_G0009599.1 mouse_genomes_project 18 74074806 74074913 + Gm26438 misc_RNA misc_RNA MGP_LPJ_T0049050.1 MGP_LPJ_G0024153.1 mouse_genomes_project 18 32631994 32660544 - MGP_LPJ_P0049050 Reep5 protein_coding protein_coding MGP_LPJ_T0017592.1 MGP_LPJ_G0015285.1 mouse_genomes_project 18 67458774 67465422 - B430212C06Rik processed_transcript processed_transcript MGP_LPJ_T0017593.1 MGP_LPJ_G0015285.1 mouse_genomes_project 18 67458774 67483779 - B430212C06Rik processed_transcript processed_transcript MGP_LPJ_T0017594.1 MGP_LPJ_G0015285.1 mouse_genomes_project 18 67458954 67483259 - B430212C06Rik processed_transcript processed_transcript MGP_LPJ_T0017595.1 MGP_LPJ_G0015285.1 mouse_genomes_project 18 67460583 67465601 - B430212C06Rik processed_transcript retained_intron MGP_LPJ_T0017596.1 MGP_LPJ_G0015285.1 mouse_genomes_project 18 67460596 67465661 - B430212C06Rik processed_transcript processed_transcript MGP_LPJ_T0100516.1 MGP_LPJ_G0038779.1 mouse_genomes_project 18 66631785 66631896 - Gm24679 snoRNA snoRNA MGP_LPJ_T0050043.1 MGP_LPJ_G0024518.1 mouse_genomes_project 18 83236638 83250956 - MGP_LPJ_P0050043 Galr1 protein_coding protein_coding MGP_LPJ_T0100511.1 MGP_LPJ_G0038774.1 mouse_genomes_project 18 45893057 45893202 - Gm22791 snoRNA snoRNA MGP_LPJ_T0001039.1 MGP_LPJ_G0000964.1 mouse_genomes_project 18 54601499 54601931 + TEC TEC MGP_LPJ_T0050018.1 MGP_LPJ_G0024511.1 mouse_genomes_project 18 81006661 81027380 - MGP_LPJ_P0050018 Hsbp1l1 protein_coding protein_coding MGP_LPJ_T0049311.1 MGP_LPJ_G0024272.1 mouse_genomes_project 18 36422393 36432110 - Hdac3 protein_coding retained_intron MGP_LPJ_T0049312.1 MGP_LPJ_G0024272.1 mouse_genomes_project 18 36423521 36430625 - Hdac3 protein_coding retained_intron MGP_LPJ_T0049313.1 MGP_LPJ_G0024272.1 mouse_genomes_project 18 36423521 36441501 - MGP_LPJ_P0049313 Hdac3 protein_coding protein_coding MGP_LPJ_T0049314.1 MGP_LPJ_G0024272.1 mouse_genomes_project 18 36423527 36441444 - Hdac3 protein_coding processed_transcript MGP_LPJ_T0049238.1 MGP_LPJ_G0024227.1 mouse_genomes_project 18 35780283 35783097 + MGP_LPJ_P0049238 Pcdhb2 protein_coding protein_coding MGP_LPJ_T0049239.1 MGP_LPJ_G0024227.1 mouse_genomes_project 18 35780311 35781893 + MGP_LPJ_P0049239 Pcdhb2 protein_coding protein_coding MGP_LPJ_T0099278.1 MGP_LPJ_G0037541.1 mouse_genomes_project 18 81832807 81832936 + Gm25718 snRNA snRNA MGP_LPJ_T0048883.1 MGP_LPJ_G0024079.1 mouse_genomes_project 18 11813404 11813848 + MGP_LPJ_P0048883 Gm5160 protein_coding protein_coding MGP_LPJ_T0049055.1 MGP_LPJ_G0024157.1 mouse_genomes_project 18 32863181 32883159 - MGP_LPJ_P0049055 Nme5 protein_coding nonsense_mediated_decay MGP_LPJ_T0049056.1 MGP_LPJ_G0024157.1 mouse_genomes_project 18 32863183 32883174 - MGP_LPJ_P0049056 Nme5 protein_coding protein_coding MGP_LPJ_T0049057.1 MGP_LPJ_G0024157.1 mouse_genomes_project 18 32863231 32883146 - MGP_LPJ_P0049057 Nme5 protein_coding nonsense_mediated_decay MGP_LPJ_T0049058.1 MGP_LPJ_G0024157.1 mouse_genomes_project 18 32869550 32883142 - MGP_LPJ_P0049058 Nme5 protein_coding nonsense_mediated_decay MGP_LPJ_T0013298.1 MGP_LPJ_G0011389.1 mouse_genomes_project 18 28663826 28664201 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003820.1 MGP_LPJ_G0003434.1 mouse_genomes_project 18 35489801 35510554 - antisense antisense MGP_LPJ_T0098372.1 MGP_LPJ_G0036653.1 mouse_genomes_project 18 24935961 24936189 - Gm26106 ribozyme ribozyme MGP_LPJ_T0099254.1 MGP_LPJ_G0037517.1 mouse_genomes_project 18 31055711 31055818 + Gm26378 snRNA snRNA MGP_LPJ_T0048838.1 MGP_LPJ_G0024069.1 mouse_genomes_project 18 9419720 9434371 + 3110002H16Rik protein_coding retained_intron MGP_LPJ_T0048839.1 MGP_LPJ_G0024069.1 mouse_genomes_project 18 9419720 9444815 + MGP_LPJ_P0048839 3110002H16Rik protein_coding protein_coding MGP_LPJ_T0048840.1 MGP_LPJ_G0024069.1 mouse_genomes_project 18 9419742 9433835 + 3110002H16Rik protein_coding retained_intron MGP_LPJ_T0048841.1 MGP_LPJ_G0024069.1 mouse_genomes_project 18 9419755 9444792 + 3110002H16Rik protein_coding retained_intron MGP_LPJ_T0048842.1 MGP_LPJ_G0024069.1 mouse_genomes_project 18 9432833 9439750 + MGP_LPJ_P0048842 3110002H16Rik protein_coding protein_coding MGP_LPJ_T0048843.1 MGP_LPJ_G0024069.1 mouse_genomes_project 18 9433788 9443051 + MGP_LPJ_P0048843 3110002H16Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0048844.1 MGP_LPJ_G0024069.1 mouse_genomes_project 18 9440222 9444792 + 3110002H16Rik protein_coding retained_intron MGP_LPJ_T0048845.1 MGP_LPJ_G0024069.1 mouse_genomes_project 18 9440446 9444750 + 3110002H16Rik protein_coding retained_intron MGP_LPJ_T0048846.1 MGP_LPJ_G0024069.1 mouse_genomes_project 18 9443822 9444792 + 3110002H16Rik protein_coding retained_intron MGP_LPJ_T0011475.1 MGP_LPJ_G0009593.1 mouse_genomes_project 18 42516477 42516790 + Gm23894 misc_RNA misc_RNA MGP_LPJ_T0049394.1 MGP_LPJ_G0024293.1 mouse_genomes_project 18 40862593 40862887 + MGP_LPJ_P0049394 Gm5689 protein_coding protein_coding MGP_LPJ_T0049436.1 MGP_LPJ_G0024317.1 mouse_genomes_project 18 43144949 43160534 + MGP_LPJ_P0049436 Dcp2 protein_coding protein_coding MGP_LPJ_T0049437.1 MGP_LPJ_G0024317.1 mouse_genomes_project 18 43144974 43195884 + MGP_LPJ_P0049437 Dcp2 protein_coding protein_coding MGP_LPJ_T0049550.1 MGP_LPJ_G0024360.1 mouse_genomes_project 18 55894477 55921147 + MGP_LPJ_P0049550 Phax protein_coding protein_coding MGP_LPJ_T0049551.1 MGP_LPJ_G0024360.1 mouse_genomes_project 18 55894627 55914262 + MGP_LPJ_P0049551 Phax protein_coding protein_coding MGP_LPJ_T0049552.1 MGP_LPJ_G0024360.1 mouse_genomes_project 18 55905568 55921670 + MGP_LPJ_P0049552 Phax protein_coding protein_coding MGP_LPJ_T0049565.1 MGP_LPJ_G0024365.1 mouse_genomes_project 18 56507213 56682444 + MGP_LPJ_P0049565 Megf10 protein_coding protein_coding MGP_LPJ_T0049566.1 MGP_LPJ_G0024365.1 mouse_genomes_project 18 56519009 56677706 + MGP_LPJ_P0049566 Megf10 protein_coding protein_coding MGP_LPJ_T0049712.1 MGP_LPJ_G0024421.1 mouse_genomes_project 18 64373514 64407068 - MGP_LPJ_P0049712 Fech protein_coding protein_coding MGP_LPJ_T0013303.1 MGP_LPJ_G0011394.1 mouse_genomes_project 18 35381194 35384481 + processed_pseudogene processed_pseudogene MGP_LPJ_T0049279.1 MGP_LPJ_G0024259.1 mouse_genomes_project 18 36197769 36321810 + MGP_LPJ_P0049279 Pcdhgb4 protein_coding protein_coding MGP_LPJ_T0049280.1 MGP_LPJ_G0024259.1 mouse_genomes_project 18 36197783 36206754 + Pcdhgb4 protein_coding processed_transcript MGP_LPJ_T0013309.1 MGP_LPJ_G0011400.1 mouse_genomes_project 18 37913420 37913771 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007056.1 MGP_LPJ_G0005801.1 mouse_genomes_project 18 74499849 74502035 + D730045A05Rik lincRNA lincRNA MGP_LPJ_T0049252.1 MGP_LPJ_G0024238.1 mouse_genomes_project 18 35917866 35921576 + MGP_LPJ_P0049252 Pcdhb13 protein_coding protein_coding MGP_LPJ_T0049236.1 MGP_LPJ_G0024225.1 mouse_genomes_project 18 35632298 35676922 + MGP_LPJ_P0049236 Pcdhac2 protein_coding protein_coding MGP_LPJ_T0049867.1 MGP_LPJ_G0024461.1 mouse_genomes_project 18 70807038 70817894 + MGP_LPJ_P0049867 Stard6 protein_coding protein_coding MGP_LPJ_T0049868.1 MGP_LPJ_G0024461.1 mouse_genomes_project 18 70807221 70825534 + MGP_LPJ_P0049868 Stard6 protein_coding protein_coding MGP_LPJ_T0049869.1 MGP_LPJ_G0024461.1 mouse_genomes_project 18 70807508 70828012 + MGP_LPJ_P0049869 Stard6 protein_coding protein_coding MGP_LPJ_T0013297.1 MGP_LPJ_G0011388.1 mouse_genomes_project 18 28631553 28632030 - processed_pseudogene processed_pseudogene MGP_LPJ_T0048746.1 MGP_LPJ_G0024041.1 mouse_genomes_project 18 2929245 3019323 - MGP_LPJ_P0048746 Arhgap12 protein_coding protein_coding MGP_LPJ_T0048747.1 MGP_LPJ_G0024041.1 mouse_genomes_project 18 2929603 3042326 - MGP_LPJ_P0048747 Arhgap12 protein_coding protein_coding MGP_LPJ_T0048748.1 MGP_LPJ_G0024041.1 mouse_genomes_project 18 2930013 3042379 - MGP_LPJ_P0048748 Arhgap12 protein_coding protein_coding MGP_LPJ_T0048749.1 MGP_LPJ_G0024041.1 mouse_genomes_project 18 2930033 3042517 - MGP_LPJ_P0048749 Arhgap12 protein_coding protein_coding MGP_LPJ_T0048750.1 MGP_LPJ_G0024041.1 mouse_genomes_project 18 2931248 3042311 - MGP_LPJ_P0048750 Arhgap12 protein_coding protein_coding MGP_LPJ_T0048751.1 MGP_LPJ_G0024041.1 mouse_genomes_project 18 2931372 3042307 - MGP_LPJ_P0048751 Arhgap12 protein_coding protein_coding MGP_LPJ_T0048752.1 MGP_LPJ_G0024041.1 mouse_genomes_project 18 2937611 2939529 - Arhgap12 protein_coding retained_intron MGP_LPJ_T0048753.1 MGP_LPJ_G0024041.1 mouse_genomes_project 18 2944300 3000114 - Arhgap12 protein_coding processed_transcript MGP_LPJ_T0048754.1 MGP_LPJ_G0024041.1 mouse_genomes_project 18 2951329 3018940 - MGP_LPJ_P0048754 Arhgap12 protein_coding protein_coding MGP_LPJ_T0048755.1 MGP_LPJ_G0024041.1 mouse_genomes_project 18 2959581 3042389 - Arhgap12 protein_coding processed_transcript MGP_LPJ_T0048756.1 MGP_LPJ_G0024041.1 mouse_genomes_project 18 2963904 2972001 - Arhgap12 protein_coding processed_transcript MGP_LPJ_T0048757.1 MGP_LPJ_G0024041.1 mouse_genomes_project 18 2964008 3042374 - MGP_LPJ_P0048757 Arhgap12 protein_coding protein_coding MGP_LPJ_T0048758.1 MGP_LPJ_G0024041.1 mouse_genomes_project 18 2966401 3042360 - Arhgap12 protein_coding processed_transcript MGP_LPJ_T0048759.1 MGP_LPJ_G0024041.1 mouse_genomes_project 18 2967771 3042354 - Arhgap12 protein_coding processed_transcript MGP_LPJ_T0048760.1 MGP_LPJ_G0024041.1 mouse_genomes_project 18 2970706 2973154 - Arhgap12 protein_coding retained_intron MGP_LPJ_T0050006.1 MGP_LPJ_G0024510.1 mouse_genomes_project 18 80984147 81000626 + MGP_LPJ_P0050006 Txnl4a protein_coding protein_coding MGP_LPJ_T0050010.1 MGP_LPJ_G0024510.1 mouse_genomes_project 18 80984215 80999267 + MGP_LPJ_P0050010 Txnl4a protein_coding protein_coding MGP_LPJ_T0050012.1 MGP_LPJ_G0024510.1 mouse_genomes_project 18 80984246 80995989 + Txnl4a protein_coding retained_intron MGP_LPJ_T0050017.1 MGP_LPJ_G0024510.1 mouse_genomes_project 18 80992998 80999403 + Txnl4a protein_coding processed_transcript MGP_LPJ_T0098210.1 MGP_LPJ_G0036491.1 mouse_genomes_project 18 32953734 32953853 + n-R5s25 rRNA rRNA MGP_LPJ_T0049753.1 MGP_LPJ_G0024433.1 mouse_genomes_project 18 66018633 66042137 - MGP_LPJ_P0049753 Lman1 protein_coding protein_coding MGP_LPJ_T0049754.1 MGP_LPJ_G0024433.1 mouse_genomes_project 18 66021075 66042121 - MGP_LPJ_P0049754 Lman1 protein_coding protein_coding MGP_LPJ_T0049755.1 MGP_LPJ_G0024433.1 mouse_genomes_project 18 66028532 66034407 - Lman1 protein_coding processed_transcript MGP_LPJ_T0049756.1 MGP_LPJ_G0024433.1 mouse_genomes_project 18 66030655 66033164 - Lman1 protein_coding retained_intron MGP_LPJ_T0049757.1 MGP_LPJ_G0024433.1 mouse_genomes_project 18 66032641 66064176 - MGP_LPJ_P0049757 Lman1 protein_coding protein_coding MGP_LPJ_T0049758.1 MGP_LPJ_G0024433.1 mouse_genomes_project 18 66033094 66059235 - Lman1 protein_coding processed_transcript MGP_LPJ_T0100520.1 MGP_LPJ_G0038783.1 mouse_genomes_project 18 75528762 75528827 + Gm23301 snoRNA snoRNA MGP_LPJ_T0049631.1 MGP_LPJ_G0024389.1 mouse_genomes_project 18 60698176 60717043 - MGP_LPJ_P0049631 Slc6a7 protein_coding protein_coding MGP_LPJ_T0048985.1 MGP_LPJ_G0024123.1 mouse_genomes_project 18 23429087 23718598 - MGP_LPJ_P0048985 Celf4 protein_coding unknown_likely_coding MGP_LPJ_T0048986.1 MGP_LPJ_G0024123.1 mouse_genomes_project 18 23429100 23719054 - MGP_LPJ_P0048986 Celf4 protein_coding protein_coding MGP_LPJ_T0048987.1 MGP_LPJ_G0024123.1 mouse_genomes_project 18 23429100 23719054 - MGP_LPJ_P0048987 Celf4 protein_coding protein_coding MGP_LPJ_T0049026.1 MGP_LPJ_G0024147.1 mouse_genomes_project 18 31429547 31446245 - MGP_LPJ_P0049026 Stard4 protein_coding protein_coding MGP_LPJ_T0049027.1 MGP_LPJ_G0024147.1 mouse_genomes_project 18 31433593 31446149 - MGP_LPJ_P0049027 Stard4 protein_coding protein_coding MGP_LPJ_T0049028.1 MGP_LPJ_G0024147.1 mouse_genomes_project 18 31433787 31446155 - MGP_LPJ_P0049028 Stard4 protein_coding protein_coding MGP_LPJ_T0049029.1 MGP_LPJ_G0024147.1 mouse_genomes_project 18 31435085 31446204 - Stard4 protein_coding retained_intron MGP_LPJ_T0001038.1 MGP_LPJ_G0000963.1 mouse_genomes_project 18 54415865 54416077 + TEC TEC MGP_LPJ_T0003808.1 MGP_LPJ_G0003425.1 mouse_genomes_project 18 9450283 9455348 + Gm15956 antisense antisense MGP_LPJ_T0100505.1 MGP_LPJ_G0038768.1 mouse_genomes_project 18 33273538 33273605 - Gm22200 snoRNA snoRNA MGP_LPJ_T0049423.1 MGP_LPJ_G0024308.1 mouse_genomes_project 18 42794883 42799213 + MGP_LPJ_P0049423 Spink14 protein_coding protein_coding MGP_LPJ_T0049424.1 MGP_LPJ_G0024308.1 mouse_genomes_project 18 42795708 42799213 + MGP_LPJ_P0049424 Spink14 protein_coding protein_coding MGP_LPJ_T0011484.1 MGP_LPJ_G0009602.1 mouse_genomes_project 18 85795770 85796069 + Gm22819 misc_RNA misc_RNA MGP_LPJ_T0048972.1 MGP_LPJ_G0024118.1 mouse_genomes_project 18 22576288 22624705 + MGP_LPJ_P0048972 Mocos protein_coding protein_coding MGP_LPJ_T0049217.1 MGP_LPJ_G0024212.1 mouse_genomes_project 18 35415034 35676922 + MGP_LPJ_P0049217 Pcdha4 protein_coding protein_coding MGP_LPJ_T0049218.1 MGP_LPJ_G0024212.1 mouse_genomes_project 18 35415044 35417938 + Pcdha4 protein_coding retained_intron MGP_LPJ_T0049219.1 MGP_LPJ_G0024212.1 mouse_genomes_project 18 35415061 35676926 + MGP_LPJ_P0049219 Pcdha4 protein_coding protein_coding MGP_LPJ_T0049866.1 MGP_LPJ_G0024460.1 mouse_genomes_project 18 70785976 70806134 - MGP_LPJ_P0049866 4930503L19Rik protein_coding protein_coding MGP_LPJ_T0049097.1 MGP_LPJ_G0024174.1 mouse_genomes_project 18 33901644 33902013 + MGP_LPJ_P0049097 Gm5239 protein_coding protein_coding MGP_LPJ_T0099269.1 MGP_LPJ_G0037532.1 mouse_genomes_project 18 63384654 63384717 + Gm23581 snRNA snRNA MGP_LPJ_T0050030.1 MGP_LPJ_G0024513.1 mouse_genomes_project 18 81078243 81152368 - MGP_LPJ_P0050030 Kcng2 protein_coding protein_coding MGP_LPJ_T0050031.1 MGP_LPJ_G0024513.1 mouse_genomes_project 18 81107970 81151450 - MGP_LPJ_P0050031 Kcng2 protein_coding protein_coding MGP_LPJ_T0050032.1 MGP_LPJ_G0024513.1 mouse_genomes_project 18 81108235 81151764 - MGP_LPJ_P0050032 Kcng2 protein_coding protein_coding MGP_LPJ_T0098214.1 MGP_LPJ_G0036495.1 mouse_genomes_project 18 69434666 69434800 - Gm23536 rRNA rRNA MGP_LPJ_T0099274.1 MGP_LPJ_G0037537.1 mouse_genomes_project 18 65927997 65928057 - Gm25150 snRNA snRNA MGP_LPJ_T0001037.1 MGP_LPJ_G0000962.1 mouse_genomes_project 18 45038559 45039270 + TEC TEC MGP_LPJ_T0010286.1 MGP_LPJ_G0008404.1 mouse_genomes_project 18 70842741 70842845 + Mir6357 miRNA miRNA MGP_LPJ_T0048709.1 MGP_LPJ_G0024033.1 mouse_genomes_project 18 356805 365253 + MGP_LPJ_P0048709 Bambi protein_coding protein_coding MGP_LPJ_T0049356.1 MGP_LPJ_G0024284.1 mouse_genomes_project 18 37382245 37463868 - MGP_LPJ_P0049356 Fgf1 protein_coding protein_coding MGP_LPJ_T0049357.1 MGP_LPJ_G0024284.1 mouse_genomes_project 18 37382247 37475271 - MGP_LPJ_P0049357 Fgf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0049358.1 MGP_LPJ_G0024284.1 mouse_genomes_project 18 37383749 37410788 - MGP_LPJ_P0049358 Fgf1 protein_coding protein_coding MGP_LPJ_T0049359.1 MGP_LPJ_G0024284.1 mouse_genomes_project 18 37385477 37402789 - MGP_LPJ_P0049359 Fgf1 protein_coding protein_coding MGP_LPJ_T0049360.1 MGP_LPJ_G0024284.1 mouse_genomes_project 18 37390408 37410173 - MGP_LPJ_P0049360 Fgf1 protein_coding protein_coding MGP_LPJ_T0049361.1 MGP_LPJ_G0024284.1 mouse_genomes_project 18 37390449 37402902 - Fgf1 protein_coding retained_intron MGP_LPJ_T0049362.1 MGP_LPJ_G0024284.1 mouse_genomes_project 18 37402608 37475022 - MGP_LPJ_P0049362 Fgf1 protein_coding protein_coding MGP_LPJ_T0049638.1 MGP_LPJ_G0024393.1 mouse_genomes_project 18 60840781 60886452 - MGP_LPJ_P0049638 Hmgxb3 protein_coding protein_coding MGP_LPJ_T0003830.1 MGP_LPJ_G0003444.1 mouse_genomes_project 18 41654432 41657854 + 4933407I08Rik antisense antisense MGP_LPJ_T0049632.1 MGP_LPJ_G0024390.1 mouse_genomes_project 18 60721704 60739063 - MGP_LPJ_P0049632 Cdx1 protein_coding protein_coding MGP_LPJ_T0048965.1 MGP_LPJ_G0024114.1 mouse_genomes_project 18 22388271 22395166 + MGP_LPJ_P0048965 2700062C07Rik protein_coding protein_coding MGP_LPJ_T0048966.1 MGP_LPJ_G0024115.1 mouse_genomes_project 18 22404521 22452416 - MGP_LPJ_P0048966 Rprd1a protein_coding protein_coding MGP_LPJ_T0049922.1 MGP_LPJ_G0024478.1 mouse_genomes_project 18 75457359 75485011 - MGP_LPJ_P0049922 Lipg protein_coding protein_coding MGP_LPJ_T0049200.1 MGP_LPJ_G0024205.1 mouse_genomes_project 18 35210938 35213492 - Dnd1 protein_coding retained_intron MGP_LPJ_T0049201.1 MGP_LPJ_G0024205.1 mouse_genomes_project 18 35210940 35213476 - MGP_LPJ_P0049201 Dnd1 protein_coding protein_coding MGP_LPJ_T0049202.1 MGP_LPJ_G0024205.1 mouse_genomes_project 18 35210942 35213476 - Dnd1 protein_coding retained_intron MGP_LPJ_T0049290.1 MGP_LPJ_G0024267.1 mouse_genomes_project 18 36243324 36321813 + MGP_LPJ_P0049290 Pcdhga12 protein_coding protein_coding MGP_LPJ_T0049291.1 MGP_LPJ_G0024267.1 mouse_genomes_project 18 36243551 36247859 + Pcdhga12 protein_coding retained_intron MGP_LPJ_T0049017.1 MGP_LPJ_G0024142.1 mouse_genomes_project 18 30600836 30660308 + MGP_LPJ_P0049017 Bin1 protein_coding protein_coding MGP_LPJ_T0049018.1 MGP_LPJ_G0024142.1 mouse_genomes_project 18 30600836 30660308 + MGP_LPJ_P0049018 Bin1 protein_coding protein_coding MGP_LPJ_T0003823.1 MGP_LPJ_G0003437.1 mouse_genomes_project 18 36139687 36140368 - Gm37118 antisense antisense MGP_LPJ_T0007049.1 MGP_LPJ_G0005796.1 mouse_genomes_project 18 61406478 61422356 - Carmn lincRNA lincRNA MGP_LPJ_T0007050.1 MGP_LPJ_G0005796.1 mouse_genomes_project 18 61407827 61422403 - Carmn lincRNA lincRNA MGP_LPJ_T0049468.1 MGP_LPJ_G0024330.1 mouse_genomes_project 18 45626969 45681363 + MGP_LPJ_P0049468 Ap3s1 protein_coding protein_coding MGP_LPJ_T0049469.1 MGP_LPJ_G0024330.1 mouse_genomes_project 18 45627065 45677266 + MGP_LPJ_P0049469 Ap3s1 protein_coding unknown_likely_coding MGP_LPJ_T0010255.1 MGP_LPJ_G0008373.1 mouse_genomes_project 18 9996999 9997084 + Mir1948 miRNA miRNA MGP_LPJ_T0013313.1 MGP_LPJ_G0011404.1 mouse_genomes_project 18 47593921 47594928 + processed_pseudogene processed_pseudogene MGP_LPJ_T0049586.1 MGP_LPJ_G0024376.1 mouse_genomes_project 18 59788101 59824259 + MGP_LPJ_P0049586 Gm4951 protein_coding protein_coding MGP_LPJ_T0017597.1 MGP_LPJ_G0015286.1 mouse_genomes_project 18 75930936 75932682 - Gm20544 processed_transcript processed_transcript MGP_LPJ_T0049014.1 MGP_LPJ_G0024141.1 mouse_genomes_project 18 30459128 30489748 + MGP_LPJ_P0049014 Ercc3 protein_coding protein_coding MGP_LPJ_T0049015.1 MGP_LPJ_G0024141.1 mouse_genomes_project 18 30459182 30489748 + Ercc3 protein_coding retained_intron MGP_LPJ_T0049016.1 MGP_LPJ_G0024141.1 mouse_genomes_project 18 30476866 30489688 + Ercc3 protein_coding processed_transcript MGP_LPJ_T0049797.1 MGP_LPJ_G0024454.1 mouse_genomes_project 18 68633750 68647967 - MGP_LPJ_P0049797 Mc2r protein_coding protein_coding MGP_LPJ_T0048900.1 MGP_LPJ_G0024088.1 mouse_genomes_project 18 17576678 17617671 - MGP_LPJ_P0048900 Dsc3 protein_coding protein_coding MGP_LPJ_T0048901.1 MGP_LPJ_G0024088.1 mouse_genomes_project 18 17579413 17617499 - MGP_LPJ_P0048901 Dsc3 protein_coding unknown_likely_coding MGP_LPJ_T0049003.1 MGP_LPJ_G0024132.1 mouse_genomes_project 18 30003851 30116522 + MGP_LPJ_P0049003 Wdr33 protein_coding protein_coding MGP_LPJ_T0049004.1 MGP_LPJ_G0024132.1 mouse_genomes_project 18 30003851 30042885 + MGP_LPJ_P0049004 Wdr33 protein_coding protein_coding MGP_LPJ_T0049596.1 MGP_LPJ_G0024381.1 mouse_genomes_project 18 60249988 60264007 - MGP_LPJ_P0049596 Myoz3 protein_coding protein_coding MGP_LPJ_T0101292.1 MGP_LPJ_G0039519.1 mouse_genomes_project 18 32488782 32502502 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0101293.1 MGP_LPJ_G0039519.1 mouse_genomes_project 18 32490804 32491076 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0050104.1 MGP_LPJ_G0024534.1 mouse_genomes_project 18 90187516 90350752 + MGP_LPJ_P0050104 Rttn protein_coding protein_coding MGP_LPJ_T0049704.1 MGP_LPJ_G0024418.1 mouse_genomes_project 18 63581851 63876380 + MGP_LPJ_P0049704 Wdr7 protein_coding protein_coding MGP_LPJ_T0001033.1 MGP_LPJ_G0000958.1 mouse_genomes_project 18 5900252 5901848 + TEC TEC MGP_LPJ_T0098014.1 MGP_LPJ_G0036295.1 mouse_genomes_project 18 78395174 78396406 + pseudogene pseudogene MGP_LPJ_T0010266.1 MGP_LPJ_G0008384.1 mouse_genomes_project 18 41002691 41002754 + Gm22697 miRNA miRNA MGP_LPJ_T0003825.1 MGP_LPJ_G0003439.1 mouse_genomes_project 18 36284075 36286280 - BC037039 antisense antisense MGP_LPJ_T0049008.1 MGP_LPJ_G0024136.1 mouse_genomes_project 18 30152259 30158899 - MGP_LPJ_P0049008 Gpr17 protein_coding protein_coding MGP_LPJ_T0049212.1 MGP_LPJ_G0024209.1 mouse_genomes_project 18 35392572 35676926 + MGP_LPJ_P0049212 Pcdha1 protein_coding protein_coding MGP_LPJ_T0049213.1 MGP_LPJ_G0024209.1 mouse_genomes_project 18 35392673 35676922 + MGP_LPJ_P0049213 Pcdha1 protein_coding protein_coding MGP_LPJ_T0010290.1 MGP_LPJ_G0008408.1 mouse_genomes_project 18 82821270 82821341 - Mir5127 miRNA miRNA MGP_LPJ_T0099268.1 MGP_LPJ_G0037531.1 mouse_genomes_project 18 61208156 61208257 - Gm25834 snRNA snRNA MGP_LPJ_T0049904.1 MGP_LPJ_G0024473.1 mouse_genomes_project 18 74710295 74715656 + MGP_LPJ_P0049904 Cxxc1 protein_coding protein_coding MGP_LPJ_T0049080.1 MGP_LPJ_G0024163.1 mouse_genomes_project 18 33047958 33066225 - MGP_LPJ_P0049080 Cdc25c protein_coding protein_coding MGP_LPJ_T0049577.1 MGP_LPJ_G0024373.1 mouse_genomes_project 18 58329002 58547911 + MGP_LPJ_P0049577 Adamts19 protein_coding protein_coding MGP_LPJ_T0049703.1 MGP_LPJ_G0024417.1 mouse_genomes_project 18 63535606 63564853 - MGP_LPJ_P0049703 Txnl1 protein_coding protein_coding MGP_LPJ_T0049485.1 MGP_LPJ_G0024336.1 mouse_genomes_project 18 48698638 48761807 - MGP_LPJ_P0049485 Dtwd2 protein_coding protein_coding MGP_LPJ_T0049486.1 MGP_LPJ_G0024336.1 mouse_genomes_project 18 48698912 48761807 - MGP_LPJ_P0049486 Dtwd2 protein_coding protein_coding MGP_LPJ_T0049487.1 MGP_LPJ_G0024336.1 mouse_genomes_project 18 48700546 48740215 - Dtwd2 protein_coding processed_transcript MGP_LPJ_T0048772.1 MGP_LPJ_G0024045.1 mouse_genomes_project 18 3683509 3709356 + MGP_LPJ_P0048772 Rab18 protein_coding protein_coding MGP_LPJ_T0049717.1 MGP_LPJ_G0024425.1 mouse_genomes_project 18 65249149 65386779 - MGP_LPJ_P0049717 Alpk2 protein_coding protein_coding MGP_LPJ_T0049718.1 MGP_LPJ_G0024425.1 mouse_genomes_project 18 65258371 65336597 - MGP_LPJ_P0049718 Alpk2 protein_coding protein_coding MGP_LPJ_T0049719.1 MGP_LPJ_G0024425.1 mouse_genomes_project 18 65351699 65386780 - Alpk2 protein_coding processed_transcript MGP_LPJ_T0098215.1 MGP_LPJ_G0036496.1 mouse_genomes_project 18 69839697 69839813 + Gm24845 rRNA rRNA MGP_LPJ_T0049778.1 MGP_LPJ_G0024447.1 mouse_genomes_project 18 67835467 67899836 - MGP_LPJ_P0049778 Ptpn2 protein_coding protein_coding MGP_LPJ_T0049779.1 MGP_LPJ_G0024447.1 mouse_genomes_project 18 67835468 67899851 - MGP_LPJ_P0049779 Ptpn2 protein_coding protein_coding MGP_LPJ_T0049780.1 MGP_LPJ_G0024447.1 mouse_genomes_project 18 67841168 67899858 - MGP_LPJ_P0049780 Ptpn2 protein_coding protein_coding MGP_LPJ_T0049781.1 MGP_LPJ_G0024447.1 mouse_genomes_project 18 67845807 67863583 - Ptpn2 protein_coding processed_transcript MGP_LPJ_T0010269.1 MGP_LPJ_G0008387.1 mouse_genomes_project 18 55870582 55870642 + Mir1258 miRNA miRNA MGP_LPJ_T0007025.1 MGP_LPJ_G0005778.1 mouse_genomes_project 18 30367262 30374217 + Gm26717 lincRNA lincRNA MGP_LPJ_T0013284.1 MGP_LPJ_G0011375.1 mouse_genomes_project 18 4868460 4869193 + processed_pseudogene processed_pseudogene MGP_LPJ_T0048921.1 MGP_LPJ_G0024100.1 mouse_genomes_project 18 18858078 18885814 + MGP_LPJ_P0048921 Mep1b protein_coding protein_coding MGP_LPJ_T0049972.1 MGP_LPJ_G0024493.1 mouse_genomes_project 18 77925949 78099690 + MGP_LPJ_P0049972 Loxhd1 protein_coding protein_coding MGP_LPJ_T0049973.1 MGP_LPJ_G0024493.1 mouse_genomes_project 18 77951453 78032964 + MGP_LPJ_P0049973 Loxhd1 protein_coding protein_coding MGP_LPJ_T0049974.1 MGP_LPJ_G0024493.1 mouse_genomes_project 18 77980687 78065535 + MGP_LPJ_P0049974 Loxhd1 protein_coding protein_coding MGP_LPJ_T0049975.1 MGP_LPJ_G0024493.1 mouse_genomes_project 18 78025707 78099774 + MGP_LPJ_P0049975 Loxhd1 protein_coding protein_coding MGP_LPJ_T0049976.1 MGP_LPJ_G0024493.1 mouse_genomes_project 18 78063550 78099319 + MGP_LPJ_P0049976 Loxhd1 protein_coding protein_coding MGP_LPJ_T0007039.1 MGP_LPJ_G0005788.1 mouse_genomes_project 18 43632640 43635931 + Gm43425 lincRNA lincRNA MGP_LPJ_T0049488.1 MGP_LPJ_G0024337.1 mouse_genomes_project 18 48845910 48992351 + MGP_LPJ_P0049488 Dmxl1 protein_coding protein_coding MGP_LPJ_T0049489.1 MGP_LPJ_G0024337.1 mouse_genomes_project 18 48846237 48993570 + MGP_LPJ_P0049489 Dmxl1 protein_coding protein_coding MGP_LPJ_T0049490.1 MGP_LPJ_G0024337.1 mouse_genomes_project 18 48846330 48984017 + MGP_LPJ_P0049490 Dmxl1 protein_coding unknown_likely_coding MGP_LPJ_T0049491.1 MGP_LPJ_G0024337.1 mouse_genomes_project 18 48912311 48954085 + Dmxl1 protein_coding retained_intron MGP_LPJ_T0049492.1 MGP_LPJ_G0024337.1 mouse_genomes_project 18 48971145 48975701 + Dmxl1 protein_coding retained_intron MGP_LPJ_T0049493.1 MGP_LPJ_G0024337.1 mouse_genomes_project 18 48976876 48980523 + Dmxl1 protein_coding retained_intron MGP_LPJ_T0049541.1 MGP_LPJ_G0024359.1 mouse_genomes_project 18 55841489 55859412 - Aldh7a1 protein_coding processed_transcript MGP_LPJ_T0049542.1 MGP_LPJ_G0024359.1 mouse_genomes_project 18 55857321 55905698 - MGP_LPJ_P0049542 Aldh7a1 protein_coding protein_coding MGP_LPJ_T0049543.1 MGP_LPJ_G0024359.1 mouse_genomes_project 18 55859167 55894363 - MGP_LPJ_P0049543 Aldh7a1 protein_coding protein_coding MGP_LPJ_T0049544.1 MGP_LPJ_G0024359.1 mouse_genomes_project 18 55859306 55894344 - MGP_LPJ_P0049544 Aldh7a1 protein_coding protein_coding MGP_LPJ_T0049545.1 MGP_LPJ_G0024359.1 mouse_genomes_project 18 55859312 55894253 - MGP_LPJ_P0049545 Aldh7a1 protein_coding nonsense_mediated_decay MGP_LPJ_T0049546.1 MGP_LPJ_G0024359.1 mouse_genomes_project 18 55864996 55870061 - Aldh7a1 protein_coding retained_intron MGP_LPJ_T0049547.1 MGP_LPJ_G0024359.1 mouse_genomes_project 18 55869691 55894261 - MGP_LPJ_P0049547 Aldh7a1 protein_coding protein_coding MGP_LPJ_T0049548.1 MGP_LPJ_G0024359.1 mouse_genomes_project 18 55879052 55891460 - Aldh7a1 protein_coding retained_intron MGP_LPJ_T0049549.1 MGP_LPJ_G0024359.1 mouse_genomes_project 18 55882421 55894232 - MGP_LPJ_P0049549 Aldh7a1 protein_coding protein_coding MGP_LPJ_T0011465.1 MGP_LPJ_G0009583.1 mouse_genomes_project 18 19092034 19092144 + Gm24372 misc_RNA misc_RNA MGP_LPJ_T0049137.1 MGP_LPJ_G0024184.1 mouse_genomes_project 18 34097080 34105949 - MGP_LPJ_P0049137 Ecscr protein_coding protein_coding MGP_LPJ_T0049138.1 MGP_LPJ_G0024184.1 mouse_genomes_project 18 34097080 34105118 - MGP_LPJ_P0049138 Ecscr protein_coding protein_coding MGP_LPJ_T0049139.1 MGP_LPJ_G0024184.1 mouse_genomes_project 18 34097267 34101285 - MGP_LPJ_P0049139 Ecscr protein_coding protein_coding MGP_LPJ_T0049140.1 MGP_LPJ_G0024184.1 mouse_genomes_project 18 34097754 34101285 - MGP_LPJ_P0049140 Ecscr protein_coding protein_coding MGP_LPJ_T0049141.1 MGP_LPJ_G0024184.1 mouse_genomes_project 18 34101242 34101882 - Ecscr protein_coding processed_transcript MGP_LPJ_T0049142.1 MGP_LPJ_G0024184.1 mouse_genomes_project 18 34101509 34105886 - Ecscr protein_coding processed_transcript MGP_LPJ_T0003837.1 MGP_LPJ_G0003449.1 mouse_genomes_project 18 61489239 61491104 + 1500015A07Rik antisense antisense MGP_LPJ_T0003838.1 MGP_LPJ_G0003449.1 mouse_genomes_project 18 61489282 61501913 + 1500015A07Rik antisense antisense MGP_LPJ_T0003839.1 MGP_LPJ_G0003449.1 mouse_genomes_project 18 61498850 61501905 + 1500015A07Rik antisense antisense MGP_LPJ_T0048942.1 MGP_LPJ_G0024107.1 mouse_genomes_project 18 21637233 21663337 + Mapre2 protein_coding retained_intron MGP_LPJ_T0048943.1 MGP_LPJ_G0024107.1 mouse_genomes_project 18 21637239 21766974 + MGP_LPJ_P0048943 Mapre2 protein_coding protein_coding MGP_LPJ_T0048944.1 MGP_LPJ_G0024107.1 mouse_genomes_project 18 21637293 21742968 + MGP_LPJ_P0048944 Mapre2 protein_coding protein_coding MGP_LPJ_T0048945.1 MGP_LPJ_G0024107.1 mouse_genomes_project 18 21638625 21775642 + MGP_LPJ_P0048945 Mapre2 protein_coding protein_coding MGP_LPJ_T0048946.1 MGP_LPJ_G0024107.1 mouse_genomes_project 18 21638648 21679475 + Mapre2 protein_coding processed_transcript MGP_LPJ_T0048947.1 MGP_LPJ_G0024107.1 mouse_genomes_project 18 21685482 21716130 + Mapre2 protein_coding retained_intron MGP_LPJ_T0048948.1 MGP_LPJ_G0024107.1 mouse_genomes_project 18 21685565 21777140 + MGP_LPJ_P0048948 Mapre2 protein_coding protein_coding MGP_LPJ_T0048949.1 MGP_LPJ_G0024107.1 mouse_genomes_project 18 21685565 21774209 + MGP_LPJ_P0048949 Mapre2 protein_coding nonsense_mediated_decay MGP_LPJ_T0048927.1 MGP_LPJ_G0024104.1 mouse_genomes_project 18 20180222 20366781 + MGP_LPJ_P0048927 Asxl3 protein_coding unknown_likely_coding MGP_LPJ_T0048928.1 MGP_LPJ_G0024104.1 mouse_genomes_project 18 20180755 20214759 + Asxl3 protein_coding retained_intron MGP_LPJ_T0048929.1 MGP_LPJ_G0024104.1 mouse_genomes_project 18 20180961 20371460 + MGP_LPJ_P0048929 Asxl3 protein_coding protein_coding MGP_LPJ_T0048930.1 MGP_LPJ_G0024104.1 mouse_genomes_project 18 20180961 20371248 + MGP_LPJ_P0048930 Asxl3 protein_coding protein_coding MGP_LPJ_T0049044.1 MGP_LPJ_G0024152.1 mouse_genomes_project 18 32616585 32622097 + Srp19 protein_coding processed_transcript MGP_LPJ_T0049045.1 MGP_LPJ_G0024152.1 mouse_genomes_project 18 32616861 32622273 + Srp19 protein_coding processed_transcript MGP_LPJ_T0049046.1 MGP_LPJ_G0024152.1 mouse_genomes_project 18 32616883 32622303 + Srp19 protein_coding retained_intron MGP_LPJ_T0049047.1 MGP_LPJ_G0024152.1 mouse_genomes_project 18 32616883 32622351 + MGP_LPJ_P0049047 Srp19 protein_coding protein_coding MGP_LPJ_T0049048.1 MGP_LPJ_G0024152.1 mouse_genomes_project 18 32616896 32622173 + MGP_LPJ_P0049048 Srp19 protein_coding protein_coding MGP_LPJ_T0049049.1 MGP_LPJ_G0024152.1 mouse_genomes_project 18 32616914 32622305 + MGP_LPJ_P0049049 Srp19 protein_coding nonsense_mediated_decay MGP_LPJ_T0049865.1 MGP_LPJ_G0024459.1 mouse_genomes_project 18 70566353 70570509 - MGP_LPJ_P0049865 Dynap protein_coding protein_coding MGP_LPJ_T0010250.1 MGP_LPJ_G0008368.1 mouse_genomes_project 18 6835307 6835413 - Gm23637 miRNA miRNA MGP_LPJ_T0050068.1 MGP_LPJ_G0024523.1 mouse_genomes_project 18 85025888 85037143 + MGP_LPJ_P0050068 Zadh2 protein_coding protein_coding MGP_LPJ_T0049574.1 MGP_LPJ_G0024370.1 mouse_genomes_project 18 57429281 57649407 - MGP_LPJ_P0049574 Fbn2 protein_coding protein_coding MGP_LPJ_T0010267.1 MGP_LPJ_G0008385.1 mouse_genomes_project 18 55253627 55253716 - Gm23335 miRNA miRNA MGP_LPJ_T0001036.1 MGP_LPJ_G0000961.1 mouse_genomes_project 18 44949310 44949912 - TEC TEC MGP_LPJ_T0049430.1 MGP_LPJ_G0024313.1 mouse_genomes_project 18 42950037 42963897 - MGP_LPJ_P0049430 Spink11 protein_coding protein_coding MGP_LPJ_T0049431.1 MGP_LPJ_G0024313.1 mouse_genomes_project 18 42950447 42952338 - Spink11 protein_coding retained_intron MGP_LPJ_T0010287.1 MGP_LPJ_G0008405.1 mouse_genomes_project 18 75428473 75428555 - Gm25594 miRNA miRNA MGP_LPJ_T0049932.1 MGP_LPJ_G0024483.1 mouse_genomes_project 18 76004786 76280058 - MGP_LPJ_P0049932 Ctif protein_coding protein_coding MGP_LPJ_T0049715.1 MGP_LPJ_G0024424.1 mouse_genomes_project 18 64842139 65198773 + MGP_LPJ_P0049715 Nedd4l protein_coding protein_coding MGP_LPJ_T0049716.1 MGP_LPJ_G0024424.1 mouse_genomes_project 18 65101589 65198768 + MGP_LPJ_P0049716 Nedd4l protein_coding protein_coding MGP_LPJ_T0099259.1 MGP_LPJ_G0037522.1 mouse_genomes_project 18 41791438 41791545 - Gm22264 snRNA snRNA MGP_LPJ_T0049193.1 MGP_LPJ_G0024199.1 mouse_genomes_project 18 35123728 35136021 - MGP_LPJ_P0049193 E230025N22Rik protein_coding protein_coding MGP_LPJ_T0049095.1 MGP_LPJ_G0024172.1 mouse_genomes_project 18 33557937 33563965 - MGP_LPJ_P0049095 Lrrtm2 protein_coding protein_coding MGP_LPJ_T0049096.1 MGP_LPJ_G0024173.1 mouse_genomes_project 18 33619273 33862078 - MGP_LPJ_P0049096 Sil1 protein_coding protein_coding MGP_LPJ_T0003826.1 MGP_LPJ_G0003440.1 mouse_genomes_project 18 36307363 36308556 - Gm29994 antisense antisense MGP_LPJ_T0049235.1 MGP_LPJ_G0024224.1 mouse_genomes_project 18 35573754 35676922 + MGP_LPJ_P0049235 Pcdhac1 protein_coding protein_coding MGP_LPJ_T0007057.1 MGP_LPJ_G0005802.1 mouse_genomes_project 18 76092727 76100886 + Gm10532 lincRNA lincRNA MGP_LPJ_T0049222.1 MGP_LPJ_G0024215.1 mouse_genomes_project 18 35422822 35676922 + MGP_LPJ_P0049222 Pcdha5 protein_coding protein_coding MGP_LPJ_T0050084.1 MGP_LPJ_G0024528.1 mouse_genomes_project 18 85820738 85853699 + MGP_LPJ_P0050084 Cyb5a protein_coding protein_coding MGP_LPJ_T0050085.1 MGP_LPJ_G0024528.1 mouse_genomes_project 18 85820777 85852890 + MGP_LPJ_P0050085 Cyb5a protein_coding nonsense_mediated_decay MGP_LPJ_T0050086.1 MGP_LPJ_G0024528.1 mouse_genomes_project 18 85820807 85843942 + Cyb5a protein_coding retained_intron MGP_LPJ_T0050087.1 MGP_LPJ_G0024528.1 mouse_genomes_project 18 85821279 85853160 + MGP_LPJ_P0050087 Cyb5a protein_coding protein_coding MGP_LPJ_T0050088.1 MGP_LPJ_G0024528.1 mouse_genomes_project 18 85850898 85853162 + Cyb5a protein_coding retained_intron MGP_LPJ_T0048795.1 MGP_LPJ_G0024050.1 mouse_genomes_project 18 6195351 6198697 + MGP_LPJ_P0048795 Fzd8 protein_coding protein_coding MGP_LPJ_T0013282.1 MGP_LPJ_G0011373.1 mouse_genomes_project 18 3272108 3272417 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099256.1 MGP_LPJ_G0037519.1 mouse_genomes_project 18 32289818 32289879 - Gm22788 snRNA snRNA MGP_LPJ_T0049575.1 MGP_LPJ_G0024371.1 mouse_genomes_project 18 58003570 58071372 + MGP_LPJ_P0049575 Slc27a6 protein_coding protein_coding MGP_LPJ_T0049168.1 MGP_LPJ_G0024195.1 mouse_genomes_project 18 34986540 35018713 + MGP_LPJ_P0049168 Ankhd1 protein_coding protein_coding MGP_LPJ_T0049169.1 MGP_LPJ_G0024195.1 mouse_genomes_project 18 34987164 35096212 + MGP_LPJ_P0049169 Ankhd1 protein_coding protein_coding MGP_LPJ_T0049170.1 MGP_LPJ_G0024195.1 mouse_genomes_project 18 34987164 35096212 + MGP_LPJ_P0049170 Ankhd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0049171.1 MGP_LPJ_G0024195.1 mouse_genomes_project 18 34987231 35103225 + MGP_LPJ_P0049171 Ankhd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0049172.1 MGP_LPJ_G0024195.1 mouse_genomes_project 18 35037096 35061716 + MGP_LPJ_P0049172 Ankhd1 protein_coding protein_coding MGP_LPJ_T0049173.1 MGP_LPJ_G0024195.1 mouse_genomes_project 18 35042489 35070733 + Ankhd1 protein_coding processed_transcript MGP_LPJ_T0049174.1 MGP_LPJ_G0024195.1 mouse_genomes_project 18 35050205 35070721 + MGP_LPJ_P0049174 Ankhd1 protein_coding protein_coding MGP_LPJ_T0049175.1 MGP_LPJ_G0024195.1 mouse_genomes_project 18 35050608 35061306 + Ankhd1 protein_coding retained_intron MGP_LPJ_T0049176.1 MGP_LPJ_G0024195.1 mouse_genomes_project 18 35074666 35079327 + MGP_LPJ_P0049176 Ankhd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0049177.1 MGP_LPJ_G0024195.1 mouse_genomes_project 18 35074890 35079333 + MGP_LPJ_P0049177 Ankhd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0049178.1 MGP_LPJ_G0024195.1 mouse_genomes_project 18 35077711 35080609 + Ankhd1 protein_coding retained_intron MGP_LPJ_T0049179.1 MGP_LPJ_G0024195.1 mouse_genomes_project 18 35080636 35096217 + MGP_LPJ_P0049179 Ankhd1 protein_coding protein_coding MGP_LPJ_T0049180.1 MGP_LPJ_G0024195.1 mouse_genomes_project 18 35084164 35103225 + MGP_LPJ_P0049180 Ankhd1 protein_coding protein_coding MGP_LPJ_T0049181.1 MGP_LPJ_G0024195.1 mouse_genomes_project 18 35092813 35096114 + MGP_LPJ_P0049181 Ankhd1 protein_coding protein_coding MGP_LPJ_T0011479.1 MGP_LPJ_G0009597.1 mouse_genomes_project 18 66760003 66760322 + Gm22219 misc_RNA misc_RNA MGP_LPJ_T0100509.1 MGP_LPJ_G0038772.1 mouse_genomes_project 18 36183376 36183467 + Gm24401 snoRNA snoRNA MGP_LPJ_T0048891.1 MGP_LPJ_G0024083.1 mouse_genomes_project 18 12377990 12480669 - MGP_LPJ_P0048891 Kctd1 protein_coding protein_coding MGP_LPJ_T0048892.1 MGP_LPJ_G0024083.1 mouse_genomes_project 18 12377990 12572484 - MGP_LPJ_P0048892 Kctd1 protein_coding protein_coding MGP_LPJ_T0049999.1 MGP_LPJ_G0024503.1 mouse_genomes_project 18 79053618 79054566 + MGP_LPJ_P0049999 Gm6133 protein_coding protein_coding MGP_LPJ_T0007014.1 MGP_LPJ_G0005771.1 mouse_genomes_project 18 8129882 8132289 - 1010001N08Rik lincRNA lincRNA MGP_LPJ_T0007015.1 MGP_LPJ_G0005771.1 mouse_genomes_project 18 8130726 8133366 - 1010001N08Rik lincRNA lincRNA MGP_LPJ_T0049256.1 MGP_LPJ_G0024242.1 mouse_genomes_project 18 35967033 35971694 + MGP_LPJ_P0049256 Pcdhb17 protein_coding protein_coding MGP_LPJ_T0049277.1 MGP_LPJ_G0024258.1 mouse_genomes_project 18 36192180 36321813 + MGP_LPJ_P0049277 Pcdhga7 protein_coding protein_coding MGP_LPJ_T0049278.1 MGP_LPJ_G0024258.1 mouse_genomes_project 18 36192234 36195278 + MGP_LPJ_P0049278 Pcdhga7 protein_coding protein_coding MGP_LPJ_T0048951.1 MGP_LPJ_G0024109.1 mouse_genomes_project 18 21859285 21867798 - MGP_LPJ_P0048951 Zscan30 protein_coding protein_coding MGP_LPJ_T0013333.1 MGP_LPJ_G0011424.1 mouse_genomes_project 18 91597655 91597874 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099261.1 MGP_LPJ_G0037524.1 mouse_genomes_project 18 48578618 48578772 - Gm25440 snRNA snRNA MGP_LPJ_T0048810.1 MGP_LPJ_G0024059.1 mouse_genomes_project 18 7384050 7570911 + Greb1l protein_coding retained_intron MGP_LPJ_T0048811.1 MGP_LPJ_G0024059.1 mouse_genomes_project 18 7384052 7631180 + MGP_LPJ_P0048811 Greb1l protein_coding protein_coding MGP_LPJ_T0048812.1 MGP_LPJ_G0024059.1 mouse_genomes_project 18 7517440 7628728 + MGP_LPJ_P0048812 Greb1l protein_coding unknown_likely_coding MGP_LPJ_T0048813.1 MGP_LPJ_G0024059.1 mouse_genomes_project 18 7525644 7607113 + MGP_LPJ_P0048813 Greb1l protein_coding protein_coding MGP_LPJ_T0048814.1 MGP_LPJ_G0024059.1 mouse_genomes_project 18 7578377 7584570 + Greb1l protein_coding retained_intron MGP_LPJ_T0048815.1 MGP_LPJ_G0024059.1 mouse_genomes_project 18 7579678 7621932 + MGP_LPJ_P0048815 Greb1l protein_coding nonsense_mediated_decay MGP_LPJ_T0048816.1 MGP_LPJ_G0024059.1 mouse_genomes_project 18 7622013 7627081 + Greb1l protein_coding processed_transcript MGP_LPJ_T0049251.1 MGP_LPJ_G0024237.1 mouse_genomes_project 18 35910987 35914021 + MGP_LPJ_P0049251 Pcdhb12 protein_coding protein_coding MGP_LPJ_T0049516.1 MGP_LPJ_G0024345.1 mouse_genomes_project 18 51612241 51639798 + MGP_LPJ_P0049516 Srfbp1 protein_coding protein_coding MGP_LPJ_T0010285.1 MGP_LPJ_G0008403.1 mouse_genomes_project 18 69276119 69276194 - Mir145b miRNA miRNA MGP_LPJ_T0049663.1 MGP_LPJ_G0024401.1 mouse_genomes_project 18 61473654 61489181 - MGP_LPJ_P0049663 Grpel2 protein_coding protein_coding MGP_LPJ_T0049085.1 MGP_LPJ_G0024167.1 mouse_genomes_project 18 33160740 33167614 + MGP_LPJ_P0049085 Reep2 protein_coding protein_coding MGP_LPJ_T0003844.1 MGP_LPJ_G0003451.1 mouse_genomes_project 18 70260384 70287362 - 1700061H18Rik antisense antisense MGP_LPJ_T0003845.1 MGP_LPJ_G0003451.1 mouse_genomes_project 18 70263995 70287349 - 1700061H18Rik antisense antisense MGP_LPJ_T0050092.1 MGP_LPJ_G0024531.1 mouse_genomes_project 18 87436579 87546026 + MGP_LPJ_P0050092 Neto1 protein_coding protein_coding MGP_LPJ_T0007026.1 MGP_LPJ_G0005779.1 mouse_genomes_project 18 30582835 30601904 - A830052D11Rik lincRNA lincRNA MGP_LPJ_T0049010.1 MGP_LPJ_G0024137.1 mouse_genomes_project 18 30169799 30253065 - MGP_LPJ_P0049010 Myo7b protein_coding protein_coding MGP_LPJ_T0013302.1 MGP_LPJ_G0011393.1 mouse_genomes_project 18 35120439 35121897 + processed_pseudogene processed_pseudogene MGP_LPJ_T0049578.1 MGP_LPJ_G0024374.1 mouse_genomes_project 18 58556346 58571780 + MGP_LPJ_P0049578 A730017C20Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0049579.1 MGP_LPJ_G0024374.1 mouse_genomes_project 18 58556380 58571780 + MGP_LPJ_P0049579 A730017C20Rik protein_coding protein_coding MGP_LPJ_T0049580.1 MGP_LPJ_G0024374.1 mouse_genomes_project 18 58556560 58571780 + MGP_LPJ_P0049580 A730017C20Rik protein_coding protein_coding MGP_LPJ_T0049581.1 MGP_LPJ_G0024374.1 mouse_genomes_project 18 58556564 58570439 + MGP_LPJ_P0049581 A730017C20Rik protein_coding protein_coding MGP_LPJ_T0049582.1 MGP_LPJ_G0024374.1 mouse_genomes_project 18 58556592 58570642 + MGP_LPJ_P0049582 A730017C20Rik protein_coding protein_coding MGP_LPJ_T0049583.1 MGP_LPJ_G0024374.1 mouse_genomes_project 18 58556608 58569492 + A730017C20Rik protein_coding retained_intron MGP_LPJ_T0049584.1 MGP_LPJ_G0024374.1 mouse_genomes_project 18 58556609 58570749 + MGP_LPJ_P0049584 A730017C20Rik protein_coding protein_coding MGP_LPJ_T0049033.1 MGP_LPJ_G0024149.1 mouse_genomes_project 18 31691592 31701802 + MGP_LPJ_P0049033 Gm10549 protein_coding protein_coding MGP_LPJ_T0049466.1 MGP_LPJ_G0024328.1 mouse_genomes_project 18 45598253 45613349 - MGP_LPJ_P0049466 Cdo1 protein_coding protein_coding MGP_LPJ_T0048971.1 MGP_LPJ_G0024117.1 mouse_genomes_project 18 22526871 22561577 + MGP_LPJ_P0048971 Elp2 protein_coding protein_coding MGP_LPJ_T0049770.1 MGP_LPJ_G0024441.1 mouse_genomes_project 18 67544456 67556496 + MGP_LPJ_P0049770 Tubb6 protein_coding protein_coding MGP_LPJ_T0049158.1 MGP_LPJ_G0024190.1 mouse_genomes_project 18 34701866 34722288 + MGP_LPJ_P0049158 Pura protein_coding protein_coding MGP_LPJ_T0007059.1 MGP_LPJ_G0005804.1 mouse_genomes_project 18 78429609 78433399 - lincRNA lincRNA MGP_LPJ_T0048773.1 MGP_LPJ_G0024046.1 mouse_genomes_project 18 3814886 3850607 - Mkx protein_coding processed_transcript MGP_LPJ_T0048774.1 MGP_LPJ_G0024046.1 mouse_genomes_project 18 3848993 3920083 - MGP_LPJ_P0048774 Mkx protein_coding protein_coding MGP_LPJ_T0048775.1 MGP_LPJ_G0024046.1 mouse_genomes_project 18 3850937 3908148 - Mkx protein_coding retained_intron MGP_LPJ_T0048776.1 MGP_LPJ_G0024046.1 mouse_genomes_project 18 3915669 3919085 - Mkx protein_coding processed_transcript MGP_LPJ_T0048777.1 MGP_LPJ_G0024046.1 mouse_genomes_project 18 3917337 3920029 - Mkx protein_coding retained_intron MGP_LPJ_T0049264.1 MGP_LPJ_G0024249.1 mouse_genomes_project 18 36118211 36121941 - MGP_LPJ_P0049264 Taf7 protein_coding protein_coding MGP_LPJ_T0049610.1 MGP_LPJ_G0024384.1 mouse_genomes_project 18 60461568 60465605 + MGP_LPJ_P0049610 Rps14 protein_coding protein_coding MGP_LPJ_T0049611.1 MGP_LPJ_G0024384.1 mouse_genomes_project 18 60461724 60464478 + Rps14 protein_coding retained_intron MGP_LPJ_T0049612.1 MGP_LPJ_G0024384.1 mouse_genomes_project 18 60461739 60465600 + MGP_LPJ_P0049612 Rps14 protein_coding protein_coding MGP_LPJ_T0049613.1 MGP_LPJ_G0024384.1 mouse_genomes_project 18 60462287 60464918 + MGP_LPJ_P0049613 Rps14 protein_coding protein_coding MGP_LPJ_T0049614.1 MGP_LPJ_G0024384.1 mouse_genomes_project 18 60462774 60465516 + MGP_LPJ_P0049614 Rps14 protein_coding protein_coding MGP_LPJ_T0049615.1 MGP_LPJ_G0024384.1 mouse_genomes_project 18 60463297 60465604 + MGP_LPJ_P0049615 Rps14 protein_coding protein_coding MGP_LPJ_T0049769.1 MGP_LPJ_G0024440.1 mouse_genomes_project 18 67483239 67520668 + MGP_LPJ_P0049769 Cidea protein_coding protein_coding MGP_LPJ_T0048710.1 MGP_LPJ_G0024034.1 mouse_genomes_project 18 1077897 1096389 + MGP_LPJ_P0048710 Lyzl1 protein_coding protein_coding MGP_LPJ_T0048711.1 MGP_LPJ_G0024034.1 mouse_genomes_project 18 1077927 1096389 + MGP_LPJ_P0048711 Lyzl1 protein_coding protein_coding MGP_LPJ_T0048977.1 MGP_LPJ_G0024122.1 mouse_genomes_project 18 23112167 23415194 + MGP_LPJ_P0048977 AW554918 protein_coding nonsense_mediated_decay MGP_LPJ_T0048978.1 MGP_LPJ_G0024122.1 mouse_genomes_project 18 23112178 23418785 + MGP_LPJ_P0048978 AW554918 protein_coding protein_coding MGP_LPJ_T0048979.1 MGP_LPJ_G0024122.1 mouse_genomes_project 18 23112182 23134059 + AW554918 protein_coding processed_transcript MGP_LPJ_T0048980.1 MGP_LPJ_G0024122.1 mouse_genomes_project 18 23112188 23231287 + AW554918 protein_coding processed_transcript MGP_LPJ_T0048981.1 MGP_LPJ_G0024122.1 mouse_genomes_project 18 23112188 23418790 + MGP_LPJ_P0048981 AW554918 protein_coding protein_coding MGP_LPJ_T0048982.1 MGP_LPJ_G0024122.1 mouse_genomes_project 18 23112188 23418790 + MGP_LPJ_P0048982 AW554918 protein_coding protein_coding MGP_LPJ_T0048983.1 MGP_LPJ_G0024122.1 mouse_genomes_project 18 23112191 23415365 + MGP_LPJ_P0048983 AW554918 protein_coding nonsense_mediated_decay MGP_LPJ_T0048984.1 MGP_LPJ_G0024122.1 mouse_genomes_project 18 23177880 23415561 + MGP_LPJ_P0048984 AW554918 protein_coding protein_coding MGP_LPJ_T0003819.1 MGP_LPJ_G0003433.1 mouse_genomes_project 18 35440179 35441888 - antisense antisense MGP_LPJ_T0013290.1 MGP_LPJ_G0011381.1 mouse_genomes_project 18 13747277 13748595 - processed_pseudogene processed_pseudogene MGP_LPJ_T0049891.1 MGP_LPJ_G0024468.1 mouse_genomes_project 18 74237989 74285851 - MGP_LPJ_P0049891 Me2 protein_coding protein_coding MGP_LPJ_T0049030.1 MGP_LPJ_G0024148.1 mouse_genomes_project 18 31664394 31691068 - MGP_LPJ_P0049030 Nrep protein_coding protein_coding MGP_LPJ_T0049031.1 MGP_LPJ_G0024148.1 mouse_genomes_project 18 31664394 31691459 - MGP_LPJ_P0049031 Nrep protein_coding protein_coding MGP_LPJ_T0049032.1 MGP_LPJ_G0024148.1 mouse_genomes_project 18 31664394 31691177 - MGP_LPJ_P0049032 Nrep protein_coding protein_coding MGP_LPJ_T0017575.1 MGP_LPJ_G0015280.1 mouse_genomes_project 18 48761999 48764222 + Gm16283 processed_transcript processed_transcript MGP_LPJ_T0013296.1 MGP_LPJ_G0011387.1 mouse_genomes_project 18 23786352 23787129 - processed_pseudogene processed_pseudogene MGP_LPJ_T0049133.1 MGP_LPJ_G0024181.1 mouse_genomes_project 18 34032157 34037538 - MGP_LPJ_P0049133 Spata24 protein_coding protein_coding MGP_LPJ_T0049134.1 MGP_LPJ_G0024181.1 mouse_genomes_project 18 34035368 34037538 - MGP_LPJ_P0049134 Spata24 protein_coding protein_coding MGP_LPJ_T0013310.1 MGP_LPJ_G0011401.1 mouse_genomes_project 18 39348232 39348673 + processed_pseudogene processed_pseudogene MGP_LPJ_T0099248.1 MGP_LPJ_G0037511.1 mouse_genomes_project 18 6763839 6763942 - Gm23350 snRNA snRNA MGP_LPJ_T0048862.1 MGP_LPJ_G0024074.1 mouse_genomes_project 18 10023703 10038717 + MGP_LPJ_P0048862 Cabyr protein_coding protein_coding MGP_LPJ_T0048863.1 MGP_LPJ_G0024074.1 mouse_genomes_project 18 10023726 10038711 + MGP_LPJ_P0048863 Cabyr protein_coding nonsense_mediated_decay MGP_LPJ_T0048864.1 MGP_LPJ_G0024074.1 mouse_genomes_project 18 10023728 10038711 + MGP_LPJ_P0048864 Cabyr protein_coding protein_coding MGP_LPJ_T0048865.1 MGP_LPJ_G0024074.1 mouse_genomes_project 18 10023734 10038713 + MGP_LPJ_P0048865 Cabyr protein_coding protein_coding MGP_LPJ_T0048866.1 MGP_LPJ_G0024074.1 mouse_genomes_project 18 10023734 10038713 + MGP_LPJ_P0048866 Cabyr protein_coding protein_coding MGP_LPJ_T0048867.1 MGP_LPJ_G0024074.1 mouse_genomes_project 18 10023734 10038713 + MGP_LPJ_P0048867 Cabyr protein_coding protein_coding MGP_LPJ_T0049685.1 MGP_LPJ_G0024415.1 mouse_genomes_project 18 62824314 62847559 + MGP_LPJ_P0049685 Napg protein_coding protein_coding MGP_LPJ_T0049686.1 MGP_LPJ_G0024415.1 mouse_genomes_project 18 62824339 62827132 + Napg protein_coding retained_intron MGP_LPJ_T0049687.1 MGP_LPJ_G0024415.1 mouse_genomes_project 18 62824379 62845041 + MGP_LPJ_P0049687 Napg protein_coding protein_coding MGP_LPJ_T0049688.1 MGP_LPJ_G0024415.1 mouse_genomes_project 18 62824400 62829264 + Napg protein_coding retained_intron MGP_LPJ_T0049689.1 MGP_LPJ_G0024415.1 mouse_genomes_project 18 62826716 62829492 + Napg protein_coding retained_intron MGP_LPJ_T0049690.1 MGP_LPJ_G0024415.1 mouse_genomes_project 18 62832434 62838311 + Napg protein_coding processed_transcript MGP_LPJ_T0049691.1 MGP_LPJ_G0024415.1 mouse_genomes_project 18 62832517 62842696 + Napg protein_coding retained_intron MGP_LPJ_T0049692.1 MGP_LPJ_G0024415.1 mouse_genomes_project 18 62834690 62843145 + Napg protein_coding processed_transcript MGP_LPJ_T0048868.1 MGP_LPJ_G0024075.1 mouse_genomes_project 18 10038935 10108386 - MGP_LPJ_P0048868 Osbpl1a protein_coding protein_coding MGP_LPJ_T0048869.1 MGP_LPJ_G0024075.1 mouse_genomes_project 18 10039789 10174246 - MGP_LPJ_P0048869 Osbpl1a protein_coding protein_coding MGP_LPJ_T0048870.1 MGP_LPJ_G0024075.1 mouse_genomes_project 18 10039812 10245788 - MGP_LPJ_P0048870 Osbpl1a protein_coding protein_coding MGP_LPJ_T0048871.1 MGP_LPJ_G0024075.1 mouse_genomes_project 18 10047432 10052098 - Osbpl1a protein_coding retained_intron MGP_LPJ_T0048872.1 MGP_LPJ_G0024075.1 mouse_genomes_project 18 10051763 10154258 - MGP_LPJ_P0048872 Osbpl1a protein_coding protein_coding MGP_LPJ_T0048873.1 MGP_LPJ_G0024075.1 mouse_genomes_project 18 10053806 10184906 - Osbpl1a protein_coding retained_intron MGP_LPJ_T0048874.1 MGP_LPJ_G0024075.1 mouse_genomes_project 18 10058281 10160046 - MGP_LPJ_P0048874 Osbpl1a protein_coding protein_coding MGP_LPJ_T0048875.1 MGP_LPJ_G0024075.1 mouse_genomes_project 18 10161168 10245942 - Osbpl1a protein_coding retained_intron MGP_LPJ_T0048876.1 MGP_LPJ_G0024075.1 mouse_genomes_project 18 10197063 10245878 - MGP_LPJ_P0048876 Osbpl1a protein_coding protein_coding MGP_LPJ_T0048877.1 MGP_LPJ_G0024075.1 mouse_genomes_project 18 10204621 10245907 - MGP_LPJ_P0048877 Osbpl1a protein_coding nonsense_mediated_decay MGP_LPJ_T0048878.1 MGP_LPJ_G0024075.1 mouse_genomes_project 18 10226187 10245893 - Osbpl1a protein_coding retained_intron MGP_LPJ_T0048879.1 MGP_LPJ_G0024075.1 mouse_genomes_project 18 10231828 10245890 - Osbpl1a protein_coding processed_transcript MGP_LPJ_T0049892.1 MGP_LPJ_G0024469.1 mouse_genomes_project 18 74334322 74354208 + MGP_LPJ_P0049892 Mro protein_coding protein_coding MGP_LPJ_T0049893.1 MGP_LPJ_G0024469.1 mouse_genomes_project 18 74334324 74354622 + MGP_LPJ_P0049893 Mro protein_coding protein_coding MGP_LPJ_T0049894.1 MGP_LPJ_G0024469.1 mouse_genomes_project 18 74334331 74356821 + Mro protein_coding processed_transcript MGP_LPJ_T0049895.1 MGP_LPJ_G0024469.1 mouse_genomes_project 18 74334339 74354208 + MGP_LPJ_P0049895 Mro protein_coding protein_coding MGP_LPJ_T0049896.1 MGP_LPJ_G0024469.1 mouse_genomes_project 18 74339159 74345782 + Mro protein_coding retained_intron MGP_LPJ_T0049897.1 MGP_LPJ_G0024469.1 mouse_genomes_project 18 74339200 74347492 + MGP_LPJ_P0049897 Mro protein_coding protein_coding MGP_LPJ_T0049343.1 MGP_LPJ_G0024279.1 mouse_genomes_project 18 36799607 36820780 + MGP_LPJ_P0049343 Rnf14 protein_coding protein_coding MGP_LPJ_T0049344.1 MGP_LPJ_G0024279.1 mouse_genomes_project 18 36799956 36820777 + MGP_LPJ_P0049344 Rnf14 protein_coding unknown_likely_coding MGP_LPJ_T0011467.1 MGP_LPJ_G0009585.1 mouse_genomes_project 18 23558318 23558628 - Gm25845 misc_RNA misc_RNA MGP_LPJ_T0049006.1 MGP_LPJ_G0024134.1 mouse_genomes_project 18 30116628 30119440 - MGP_LPJ_P0049006 Sft2d3 protein_coding protein_coding MGP_LPJ_T0049011.1 MGP_LPJ_G0024138.1 mouse_genomes_project 18 30276599 30316090 + MGP_LPJ_P0049011 Iws1 protein_coding protein_coding MGP_LPJ_T0013323.1 MGP_LPJ_G0011414.1 mouse_genomes_project 18 60465984 60466389 - processed_pseudogene processed_pseudogene MGP_LPJ_T0048712.1 MGP_LPJ_G0024035.1 mouse_genomes_project 18 1261603 1283234 - MGP_LPJ_P0048712 Map3k8 protein_coding protein_coding MGP_LPJ_T0048713.1 MGP_LPJ_G0024035.1 mouse_genomes_project 18 1261616 1283238 - MGP_LPJ_P0048713 Map3k8 protein_coding nonsense_mediated_decay MGP_LPJ_T0048714.1 MGP_LPJ_G0024035.1 mouse_genomes_project 18 1261617 1266572 - Map3k8 protein_coding processed_transcript MGP_LPJ_T0048715.1 MGP_LPJ_G0024035.1 mouse_genomes_project 18 1264121 1265325 - Map3k8 protein_coding retained_intron MGP_LPJ_T0048716.1 MGP_LPJ_G0024035.1 mouse_genomes_project 18 1277731 1283296 - Map3k8 protein_coding retained_intron MGP_LPJ_T0049768.1 MGP_LPJ_G0024439.1 mouse_genomes_project 18 67424999 67456712 + MGP_LPJ_P0049768 Impa2 protein_coding protein_coding MGP_LPJ_T0010259.1 MGP_LPJ_G0008377.1 mouse_genomes_project 18 33923478 33923589 + miRNA miRNA MGP_LPJ_T0049591.1 MGP_LPJ_G0024380.1 mouse_genomes_project 18 60234531 60246584 + MGP_LPJ_P0049591 Rbm22 protein_coding protein_coding MGP_LPJ_T0049592.1 MGP_LPJ_G0024380.1 mouse_genomes_project 18 60234559 60235282 + Rbm22 protein_coding retained_intron MGP_LPJ_T0049593.1 MGP_LPJ_G0024380.1 mouse_genomes_project 18 60234563 60244082 + Rbm22 protein_coding retained_intron MGP_LPJ_T0049594.1 MGP_LPJ_G0024380.1 mouse_genomes_project 18 60244195 60244920 + Rbm22 protein_coding retained_intron MGP_LPJ_T0049595.1 MGP_LPJ_G0024380.1 mouse_genomes_project 18 60244378 60245766 + Rbm22 protein_coding retained_intron MGP_LPJ_T0010272.1 MGP_LPJ_G0008390.1 mouse_genomes_project 18 59748749 59748859 + Gm23576 miRNA miRNA MGP_LPJ_T0049777.1 MGP_LPJ_G0024446.1 mouse_genomes_project 18 67809661 67823755 + MGP_LPJ_P0049777 Psmg2 protein_coding protein_coding MGP_LPJ_T0100510.1 MGP_LPJ_G0038773.1 mouse_genomes_project 18 44759879 44760006 + Gm26262 snoRNA snoRNA MGP_LPJ_T0049901.1 MGP_LPJ_G0024471.1 mouse_genomes_project 18 74547265 74547748 + MGP_LPJ_P0049901 Gm9925 protein_coding protein_coding MGP_LPJ_T0049195.1 MGP_LPJ_G0024201.1 mouse_genomes_project 18 35181145 35189688 + MGP_LPJ_P0049195 Tmco6 protein_coding protein_coding MGP_LPJ_T0010270.1 MGP_LPJ_G0008388.1 mouse_genomes_project 18 57086257 57086353 + Gm44491 miRNA miRNA MGP_LPJ_T0010252.1 MGP_LPJ_G0008370.1 mouse_genomes_project 18 7855204 7855326 + Mir1b miRNA miRNA MGP_LPJ_T0011466.1 MGP_LPJ_G0009584.1 mouse_genomes_project 18 22686848 22687125 + Gm24294 misc_RNA misc_RNA MGP_LPJ_T0100497.1 MGP_LPJ_G0038760.1 mouse_genomes_project 18 21004024 21004150 + Gm22495 snoRNA snoRNA MGP_LPJ_T0099283.1 MGP_LPJ_G0037546.1 mouse_genomes_project 18 91517296 91517360 + Gm23859 snRNA snRNA MGP_LPJ_T0048999.1 MGP_LPJ_G0024129.1 mouse_genomes_project 18 29826408 29915902 + MGP_LPJ_P0048999 Sap130 protein_coding protein_coding MGP_LPJ_T0049000.1 MGP_LPJ_G0024129.1 mouse_genomes_project 18 29827088 29915905 + MGP_LPJ_P0049000 Sap130 protein_coding unknown_likely_coding MGP_LPJ_T0049473.1 MGP_LPJ_G0024333.1 mouse_genomes_project 18 45864949 46004430 + MGP_LPJ_P0049473 Commd10 protein_coding protein_coding MGP_LPJ_T0001035.1 MGP_LPJ_G0000960.1 mouse_genomes_project 18 42883903 42884076 + TEC TEC MGP_LPJ_T0049265.1 MGP_LPJ_G0024250.1 mouse_genomes_project 18 36139528 36321813 + MGP_LPJ_P0049265 Pcdhga1 protein_coding protein_coding MGP_LPJ_T0049266.1 MGP_LPJ_G0024250.1 mouse_genomes_project 18 36139528 36142775 + MGP_LPJ_P0049266 Pcdhga1 protein_coding protein_coding MGP_LPJ_T0049145.1 MGP_LPJ_G0024186.1 mouse_genomes_project 18 34155826 34191876 + MGP_LPJ_P0049145 Ube2d2a protein_coding protein_coding MGP_LPJ_T0049146.1 MGP_LPJ_G0024186.1 mouse_genomes_project 18 34155869 34191867 + MGP_LPJ_P0049146 Ube2d2a protein_coding protein_coding MGP_LPJ_T0048767.1 MGP_LPJ_G0024043.1 mouse_genomes_project 18 3336620 3419845 - MGP_LPJ_P0048767 Epc1 protein_coding protein_coding MGP_LPJ_T0048768.1 MGP_LPJ_G0024043.1 mouse_genomes_project 18 3336622 3394720 - MGP_LPJ_P0048768 Epc1 protein_coding protein_coding MGP_LPJ_T0048769.1 MGP_LPJ_G0024043.1 mouse_genomes_project 18 3340211 3342514 - MGP_LPJ_P0048769 Epc1 protein_coding protein_coding MGP_LPJ_T0048770.1 MGP_LPJ_G0024043.1 mouse_genomes_project 18 3393023 3394720 - MGP_LPJ_P0048770 Epc1 protein_coding protein_coding MGP_LPJ_T0099257.1 MGP_LPJ_G0037520.1 mouse_genomes_project 18 32467230 32467292 - Gm23411 snRNA snRNA MGP_LPJ_T0049679.1 MGP_LPJ_G0024412.1 mouse_genomes_project 18 62469900 62484076 + MGP_LPJ_P0049679 Spink10 protein_coding protein_coding MGP_LPJ_T0049680.1 MGP_LPJ_G0024412.1 mouse_genomes_project 18 62472433 62474333 + Spink10 protein_coding processed_transcript MGP_LPJ_T0049681.1 MGP_LPJ_G0024412.1 mouse_genomes_project 18 62472487 62475595 + Spink10 protein_coding processed_transcript MGP_LPJ_T0010258.1 MGP_LPJ_G0008376.1 mouse_genomes_project 18 33920913 33920983 + Mir1949 miRNA miRNA MGP_LPJ_T0049223.1 MGP_LPJ_G0024216.1 mouse_genomes_project 18 35425130 36313055 + MGP_LPJ_P0049223 Gm37013 protein_coding protein_coding MGP_LPJ_T0007042.1 MGP_LPJ_G0005791.1 mouse_genomes_project 18 53637088 53670900 + Redrum lincRNA lincRNA MGP_LPJ_T0099263.1 MGP_LPJ_G0037526.1 mouse_genomes_project 18 50742017 50742142 - Gm25785 snRNA snRNA MGP_LPJ_T0049276.1 MGP_LPJ_G0024257.1 mouse_genomes_project 18 36184436 36321813 + MGP_LPJ_P0049276 Pcdhga6 protein_coding protein_coding MGP_LPJ_T0049421.1 MGP_LPJ_G0024306.1 mouse_genomes_project 18 42532572 42554405 - MGP_LPJ_P0049421 Gm94 protein_coding protein_coding MGP_LPJ_T0049659.1 MGP_LPJ_G0024399.1 mouse_genomes_project 18 61446175 61450775 + MGP_LPJ_P0049659 Il17b protein_coding protein_coding MGP_LPJ_T0007062.1 MGP_LPJ_G0005807.1 mouse_genomes_project 18 83720368 83736137 + 4930445N18Rik lincRNA lincRNA MGP_LPJ_T0007063.1 MGP_LPJ_G0005807.1 mouse_genomes_project 18 83720371 83723641 + 4930445N18Rik lincRNA lincRNA MGP_LPJ_T0048915.1 MGP_LPJ_G0024097.1 mouse_genomes_project 18 18562770 18642707 - MGP_LPJ_P0048915 Trappc8 protein_coding protein_coding MGP_LPJ_T0048916.1 MGP_LPJ_G0024097.1 mouse_genomes_project 18 18563481 18642696 - MGP_LPJ_P0048916 Trappc8 protein_coding unknown_likely_coding MGP_LPJ_T0048917.1 MGP_LPJ_G0024097.1 mouse_genomes_project 18 18592656 18642707 - MGP_LPJ_P0048917 Trappc8 protein_coding protein_coding MGP_LPJ_T0049286.1 MGP_LPJ_G0024263.1 mouse_genomes_project 18 36219492 36321813 + MGP_LPJ_P0049286 Pcdhgb6 protein_coding protein_coding MGP_LPJ_T0001044.1 MGP_LPJ_G0000969.1 mouse_genomes_project 18 81150894 81153940 + TEC TEC MGP_LPJ_T0007053.1 MGP_LPJ_G0005798.1 mouse_genomes_project 18 63280642 63302779 + Gm26972 lincRNA lincRNA MGP_LPJ_T0010279.1 MGP_LPJ_G0008397.1 mouse_genomes_project 18 61404680 61404750 - Mir145a miRNA miRNA MGP_LPJ_T0049714.1 MGP_LPJ_G0024423.1 mouse_genomes_project 18 64456768 64536057 - MGP_LPJ_P0049714 Atp8b1 protein_coding protein_coding MGP_LPJ_T0011461.1 MGP_LPJ_G0009579.1 mouse_genomes_project 18 13482631 13482932 + Gm22389 misc_RNA misc_RNA MGP_LPJ_T0098211.1 MGP_LPJ_G0036492.1 mouse_genomes_project 18 36865392 36865489 + Gm24690 rRNA rRNA MGP_LPJ_T0048893.1 MGP_LPJ_G0024084.1 mouse_genomes_project 18 12823235 12837500 - MGP_LPJ_P0048893 Aqp4 protein_coding protein_coding MGP_LPJ_T0048665.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 87307 156625 - MGP_LPJ_P0048665 Crem protein_coding protein_coding MGP_LPJ_T0048666.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 87613 171043 - MGP_LPJ_P0048666 Crem protein_coding protein_coding MGP_LPJ_T0048667.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 87615 170953 - MGP_LPJ_P0048667 Crem protein_coding protein_coding MGP_LPJ_T0048668.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 87615 126812 - MGP_LPJ_P0048668 Crem protein_coding protein_coding MGP_LPJ_T0048669.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 87615 170852 - MGP_LPJ_P0048669 Crem protein_coding protein_coding MGP_LPJ_T0048670.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 87615 170953 - MGP_LPJ_P0048670 Crem protein_coding protein_coding MGP_LPJ_T0048671.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 87615 170953 - MGP_LPJ_P0048671 Crem protein_coding protein_coding MGP_LPJ_T0048672.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 88216 109029 - MGP_LPJ_P0048672 Crem protein_coding protein_coding MGP_LPJ_T0048673.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 88222 170877 - Crem protein_coding processed_transcript MGP_LPJ_T0048674.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 88520 171112 - MGP_LPJ_P0048674 Crem protein_coding protein_coding MGP_LPJ_T0048675.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 88523 126809 - MGP_LPJ_P0048675 Crem protein_coding protein_coding MGP_LPJ_T0048676.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 88649 109007 - MGP_LPJ_P0048676 Crem protein_coding protein_coding MGP_LPJ_T0048677.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 88682 156541 - MGP_LPJ_P0048677 Crem protein_coding protein_coding MGP_LPJ_T0048678.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 88773 154508 - MGP_LPJ_P0048678 Crem protein_coding protein_coding MGP_LPJ_T0048679.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 88793 108392 - MGP_LPJ_P0048679 Crem protein_coding protein_coding MGP_LPJ_T0048680.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 88805 108338 - MGP_LPJ_P0048680 Crem protein_coding protein_coding MGP_LPJ_T0048681.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 88817 154512 - MGP_LPJ_P0048681 Crem protein_coding protein_coding MGP_LPJ_T0048682.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 88831 109029 - MGP_LPJ_P0048682 Crem protein_coding protein_coding MGP_LPJ_T0048683.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 88834 154508 - MGP_LPJ_P0048683 Crem protein_coding protein_coding MGP_LPJ_T0048684.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 88844 156541 - MGP_LPJ_P0048684 Crem protein_coding protein_coding MGP_LPJ_T0048685.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 88844 156541 - MGP_LPJ_P0048685 Crem protein_coding protein_coding MGP_LPJ_T0048686.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 88844 156541 - MGP_LPJ_P0048686 Crem protein_coding protein_coding MGP_LPJ_T0048687.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 88844 156541 - MGP_LPJ_P0048687 Crem protein_coding protein_coding MGP_LPJ_T0048688.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 88844 170897 - MGP_LPJ_P0048688 Crem protein_coding nonsense_mediated_decay MGP_LPJ_T0048689.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 88847 138083 - MGP_LPJ_P0048689 Crem protein_coding protein_coding MGP_LPJ_T0048690.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 88847 137948 - MGP_LPJ_P0048690 Crem protein_coding protein_coding MGP_LPJ_T0048691.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 88847 137948 - MGP_LPJ_P0048691 Crem protein_coding protein_coding MGP_LPJ_T0048692.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 88847 154508 - MGP_LPJ_P0048692 Crem protein_coding protein_coding MGP_LPJ_T0048693.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 88892 108361 - MGP_LPJ_P0048693 Crem protein_coding protein_coding MGP_LPJ_T0048694.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 89098 154508 - MGP_LPJ_P0048694 Crem protein_coding nonsense_mediated_decay MGP_LPJ_T0048695.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 89104 108998 - MGP_LPJ_P0048695 Crem protein_coding protein_coding MGP_LPJ_T0048696.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 89244 126705 - MGP_LPJ_P0048696 Crem protein_coding protein_coding MGP_LPJ_T0048697.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 89244 138125 - MGP_LPJ_P0048697 Crem protein_coding protein_coding MGP_LPJ_T0048698.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 111157 126794 - Crem protein_coding processed_transcript MGP_LPJ_T0048699.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 114891 126809 - Crem protein_coding retained_intron MGP_LPJ_T0048700.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 115314 126807 - Crem protein_coding processed_transcript MGP_LPJ_T0048701.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 121443 170953 - MGP_LPJ_P0048701 Crem protein_coding protein_coding MGP_LPJ_T0048702.1 MGP_LPJ_G0024031.1 mouse_genomes_project 18 121739 170938 - MGP_LPJ_P0048702 Crem protein_coding protein_coding MGP_LPJ_T0049799.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69617822 69851832 + MGP_LPJ_P0049799 Tcf4 protein_coding protein_coding MGP_LPJ_T0049800.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69618612 69976974 + MGP_LPJ_P0049800 Tcf4 protein_coding protein_coding MGP_LPJ_T0049801.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69618955 69981701 + MGP_LPJ_P0049801 Tcf4 protein_coding protein_coding MGP_LPJ_T0049802.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69618958 69976008 + MGP_LPJ_P0049802 Tcf4 protein_coding protein_coding MGP_LPJ_T0049803.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69618995 69975896 + MGP_LPJ_P0049803 Tcf4 protein_coding protein_coding MGP_LPJ_T0049804.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69620185 69977154 + MGP_LPJ_P0049804 Tcf4 protein_coding protein_coding MGP_LPJ_T0049805.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69620185 69976022 + MGP_LPJ_P0049805 Tcf4 protein_coding protein_coding MGP_LPJ_T0049806.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69620185 69980588 + MGP_LPJ_P0049806 Tcf4 protein_coding protein_coding MGP_LPJ_T0049807.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69620213 69975830 + MGP_LPJ_P0049807 Tcf4 protein_coding protein_coding MGP_LPJ_T0049808.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69620215 69927849 + MGP_LPJ_P0049808 Tcf4 protein_coding protein_coding MGP_LPJ_T0049809.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69620225 69771308 + Tcf4 protein_coding processed_transcript MGP_LPJ_T0049810.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69620315 69975830 + MGP_LPJ_P0049810 Tcf4 protein_coding protein_coding MGP_LPJ_T0049811.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69620637 69924672 + MGP_LPJ_P0049811 Tcf4 protein_coding protein_coding MGP_LPJ_T0049812.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69620836 69975857 + MGP_LPJ_P0049812 Tcf4 protein_coding protein_coding MGP_LPJ_T0049813.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69623683 69852497 + MGP_LPJ_P0049813 Tcf4 protein_coding protein_coding MGP_LPJ_T0049814.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69623683 69975830 + MGP_LPJ_P0049814 Tcf4 protein_coding protein_coding MGP_LPJ_T0049815.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69623729 69633660 + Tcf4 protein_coding processed_transcript MGP_LPJ_T0049816.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69624635 69852391 + MGP_LPJ_P0049816 Tcf4 protein_coding protein_coding MGP_LPJ_T0049817.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69624646 69976070 + MGP_LPJ_P0049817 Tcf4 protein_coding protein_coding MGP_LPJ_T0049818.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69624648 69852398 + MGP_LPJ_P0049818 Tcf4 protein_coding protein_coding MGP_LPJ_T0049819.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69624903 69976081 + MGP_LPJ_P0049819 Tcf4 protein_coding protein_coding MGP_LPJ_T0049820.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69624958 69943419 + Tcf4 protein_coding processed_transcript MGP_LPJ_T0049821.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69625312 69933933 + MGP_LPJ_P0049821 Tcf4 protein_coding protein_coding MGP_LPJ_T0049822.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69696400 69976071 + MGP_LPJ_P0049822 Tcf4 protein_coding protein_coding MGP_LPJ_T0049823.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69782866 69927897 + MGP_LPJ_P0049823 Tcf4 protein_coding protein_coding MGP_LPJ_T0049824.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69785491 69975877 + MGP_LPJ_P0049824 Tcf4 protein_coding protein_coding MGP_LPJ_T0049825.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69785630 69948661 + MGP_LPJ_P0049825 Tcf4 protein_coding protein_coding MGP_LPJ_T0049826.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69785752 69943460 + MGP_LPJ_P0049826 Tcf4 protein_coding protein_coding MGP_LPJ_T0049827.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69805503 69975886 + MGP_LPJ_P0049827 Tcf4 protein_coding protein_coding MGP_LPJ_T0049828.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69805742 69933989 + MGP_LPJ_P0049828 Tcf4 protein_coding protein_coding MGP_LPJ_T0049829.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69805790 69975830 + MGP_LPJ_P0049829 Tcf4 protein_coding protein_coding MGP_LPJ_T0049830.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69805800 69975909 + MGP_LPJ_P0049830 Tcf4 protein_coding protein_coding MGP_LPJ_T0049831.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69805845 69927934 + MGP_LPJ_P0049831 Tcf4 protein_coding protein_coding MGP_LPJ_T0049832.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69807180 69933949 + MGP_LPJ_P0049832 Tcf4 protein_coding protein_coding MGP_LPJ_T0049833.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69807293 69975754 + MGP_LPJ_P0049833 Tcf4 protein_coding protein_coding MGP_LPJ_T0049834.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69807496 69948860 + MGP_LPJ_P0049834 Tcf4 protein_coding protein_coding MGP_LPJ_T0049835.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69807519 69810360 + Tcf4 protein_coding retained_intron MGP_LPJ_T0049836.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69807533 69852437 + Tcf4 protein_coding processed_transcript MGP_LPJ_T0049837.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69807856 69975892 + MGP_LPJ_P0049837 Tcf4 protein_coding protein_coding MGP_LPJ_T0049838.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69807996 69927896 + MGP_LPJ_P0049838 Tcf4 protein_coding protein_coding MGP_LPJ_T0049839.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69808176 69924718 + Tcf4 protein_coding retained_intron MGP_LPJ_T0049840.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69850756 69942216 + Tcf4 protein_coding processed_transcript MGP_LPJ_T0049841.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69851084 69927975 + Tcf4 protein_coding processed_transcript MGP_LPJ_T0049842.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69880775 69976077 + MGP_LPJ_P0049842 Tcf4 protein_coding protein_coding MGP_LPJ_T0049843.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69881139 69948808 + MGP_LPJ_P0049843 Tcf4 protein_coding protein_coding MGP_LPJ_T0049844.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69881180 69968137 + MGP_LPJ_P0049844 Tcf4 protein_coding protein_coding MGP_LPJ_T0049845.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69881186 69975356 + MGP_LPJ_P0049845 Tcf4 protein_coding nonsense_mediated_decay MGP_LPJ_T0049846.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69881193 69977156 + MGP_LPJ_P0049846 Tcf4 protein_coding protein_coding MGP_LPJ_T0049847.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69881194 69924808 + Tcf4 protein_coding retained_intron MGP_LPJ_T0049848.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69881194 69885238 + Tcf4 protein_coding retained_intron MGP_LPJ_T0049849.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69881211 69948777 + Tcf4 protein_coding processed_transcript MGP_LPJ_T0049850.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69881350 69942240 + MGP_LPJ_P0049850 Tcf4 protein_coding protein_coding MGP_LPJ_T0049851.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69881949 69948675 + MGP_LPJ_P0049851 Tcf4 protein_coding protein_coding MGP_LPJ_T0049852.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69888286 69943407 + MGP_LPJ_P0049852 Tcf4 protein_coding protein_coding MGP_LPJ_T0049853.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69901041 69975830 + MGP_LPJ_P0049853 Tcf4 protein_coding protein_coding MGP_LPJ_T0049854.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69947576 69951201 + Tcf4 protein_coding retained_intron MGP_LPJ_T0049855.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69972104 69977156 + Tcf4 protein_coding retained_intron MGP_LPJ_T0049856.1 MGP_LPJ_G0024456.1 mouse_genomes_project 18 69975012 69976265 + Tcf4 protein_coding retained_intron MGP_LPJ_T0100512.1 MGP_LPJ_G0038775.1 mouse_genomes_project 18 54356395 54356488 - Gm24183 snoRNA snoRNA MGP_LPJ_T0003829.1 MGP_LPJ_G0003443.1 mouse_genomes_project 18 37940471 37962909 - Gm15337 antisense antisense MGP_LPJ_T0048910.1 MGP_LPJ_G0024094.1 mouse_genomes_project 18 18286273 18334857 + MGP_LPJ_P0048910 Dsg2 protein_coding protein_coding MGP_LPJ_T0048911.1 MGP_LPJ_G0024094.1 mouse_genomes_project 18 18286354 18316271 + MGP_LPJ_P0048911 Dsg2 protein_coding protein_coding MGP_LPJ_T0048912.1 MGP_LPJ_G0024094.1 mouse_genomes_project 18 18286445 18313634 + MGP_LPJ_P0048912 Dsg2 protein_coding protein_coding MGP_LPJ_T0049676.1 MGP_LPJ_G0024409.1 mouse_genomes_project 18 62323188 62369031 - MGP_LPJ_P0049676 Fbxo38 protein_coding protein_coding MGP_LPJ_T0049519.1 MGP_LPJ_G0024347.1 mouse_genomes_project 18 51771436 51796172 + MGP_LPJ_P0049519 Zfp474 protein_coding protein_coding MGP_LPJ_T0049228.1 MGP_LPJ_G0024221.1 mouse_genomes_project 18 35483962 35676922 + MGP_LPJ_P0049228 protein_coding protein_coding MGP_LPJ_T0013295.1 MGP_LPJ_G0011386.1 mouse_genomes_project 18 23337193 23337725 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010254.1 MGP_LPJ_G0008372.1 mouse_genomes_project 18 9068123 9068201 - Mir1901 miRNA miRNA MGP_LPJ_T0013301.1 MGP_LPJ_G0011392.1 mouse_genomes_project 18 35046254 35047026 + processed_pseudogene processed_pseudogene MGP_LPJ_T0049154.1 MGP_LPJ_G0024189.1 mouse_genomes_project 18 34414579 34608200 - MGP_LPJ_P0049154 Nrg2 protein_coding protein_coding MGP_LPJ_T0049155.1 MGP_LPJ_G0024189.1 mouse_genomes_project 18 34414579 34608200 - MGP_LPJ_P0049155 Nrg2 protein_coding protein_coding MGP_LPJ_T0049156.1 MGP_LPJ_G0024189.1 mouse_genomes_project 18 34414786 34453384 - MGP_LPJ_P0049156 Nrg2 protein_coding unknown_likely_coding MGP_LPJ_T0049157.1 MGP_LPJ_G0024189.1 mouse_genomes_project 18 34424268 34608052 - MGP_LPJ_P0049157 Nrg2 protein_coding protein_coding MGP_LPJ_T0101995.1 MGP_LPJ_G0040032.1 mouse_genomes_project 18 35457834 35485088 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0049588.1 MGP_LPJ_G0024378.1 mouse_genomes_project 18 60153031 60180988 - MGP_LPJ_P0049588 Smim3 protein_coding protein_coding MGP_LPJ_T0049340.1 MGP_LPJ_G0024278.1 mouse_genomes_project 18 36769776 36780374 - Pcdh12 protein_coding retained_intron MGP_LPJ_T0049341.1 MGP_LPJ_G0024278.1 mouse_genomes_project 18 36771512 36786485 - MGP_LPJ_P0049341 Pcdh12 protein_coding protein_coding MGP_LPJ_T0049342.1 MGP_LPJ_G0024278.1 mouse_genomes_project 18 36783169 36786814 - Pcdh12 protein_coding retained_intron MGP_LPJ_T0007054.1 MGP_LPJ_G0005799.1 mouse_genomes_project 18 65972437 65975347 + Raxos1 lincRNA lincRNA MGP_LPJ_T0048734.1 MGP_LPJ_G0024040.1 mouse_genomes_project 18 2548621 2711312 + MGP_LPJ_P0048734 Zeb1 protein_coding protein_coding MGP_LPJ_T0048735.1 MGP_LPJ_G0024040.1 mouse_genomes_project 18 2548633 2657356 + Zeb1 protein_coding retained_intron MGP_LPJ_T0048736.1 MGP_LPJ_G0024040.1 mouse_genomes_project 18 2548652 2702693 + MGP_LPJ_P0048736 Zeb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0048737.1 MGP_LPJ_G0024040.1 mouse_genomes_project 18 2548652 2702310 + MGP_LPJ_P0048737 Zeb1 protein_coding protein_coding MGP_LPJ_T0048738.1 MGP_LPJ_G0024040.1 mouse_genomes_project 18 2548673 2702347 + MGP_LPJ_P0048738 Zeb1 protein_coding nonsense_mediated_decay MGP_LPJ_T0048739.1 MGP_LPJ_G0024040.1 mouse_genomes_project 18 2550074 2596626 + Zeb1 protein_coding processed_transcript MGP_LPJ_T0048740.1 MGP_LPJ_G0024040.1 mouse_genomes_project 18 2550368 2694874 + MGP_LPJ_P0048740 Zeb1 protein_coding protein_coding MGP_LPJ_T0048741.1 MGP_LPJ_G0024040.1 mouse_genomes_project 18 2550627 2695001 + Zeb1 protein_coding processed_transcript MGP_LPJ_T0048742.1 MGP_LPJ_G0024040.1 mouse_genomes_project 18 2550969 2703519 + Zeb1 protein_coding retained_intron MGP_LPJ_T0048743.1 MGP_LPJ_G0024040.1 mouse_genomes_project 18 2560431 2598064 + Zeb1 protein_coding processed_transcript MGP_LPJ_T0048744.1 MGP_LPJ_G0024040.1 mouse_genomes_project 18 2588491 2710761 + MGP_LPJ_P0048744 Zeb1 protein_coding unknown_likely_coding MGP_LPJ_T0048745.1 MGP_LPJ_G0024040.1 mouse_genomes_project 18 2691858 2708646 + Zeb1 protein_coding processed_transcript MGP_LPJ_T0013304.1 MGP_LPJ_G0011395.1 mouse_genomes_project 18 35790901 35792165 + processed_pseudogene processed_pseudogene MGP_LPJ_T0048907.1 MGP_LPJ_G0024091.1 mouse_genomes_project 18 17882417 17925801 + MGP_LPJ_P0048907 Dsg1c protein_coding protein_coding MGP_LPJ_T0013324.1 MGP_LPJ_G0011415.1 mouse_genomes_project 18 69526852 69527687 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010284.1 MGP_LPJ_G0008402.1 mouse_genomes_project 18 68971385 68971487 + Mir6356 miRNA miRNA MGP_LPJ_T0050075.1 MGP_LPJ_G0024525.1 mouse_genomes_project 18 85566413 85608797 - MGP_LPJ_P0050075 Cndp1 protein_coding protein_coding MGP_LPJ_T0050076.1 MGP_LPJ_G0024525.1 mouse_genomes_project 18 85586412 85608759 - Cndp1 protein_coding retained_intron MGP_LPJ_T0050077.1 MGP_LPJ_G0024525.1 mouse_genomes_project 18 85588568 85608659 - Cndp1 protein_coding retained_intron MGP_LPJ_T0049432.1 MGP_LPJ_G0024314.1 mouse_genomes_project 18 42968439 42973209 + MGP_LPJ_P0049432 Gm10542 protein_coding protein_coding MGP_LPJ_T0049985.1 MGP_LPJ_G0024496.1 mouse_genomes_project 18 78468407 78480173 - MGP_LPJ_P0049985 Haus1 protein_coding protein_coding MGP_LPJ_T0049513.1 MGP_LPJ_G0024342.1 mouse_genomes_project 18 50216053 50421749 + MGP_LPJ_P0049513 Prr16 protein_coding protein_coding MGP_LPJ_T0049409.1 MGP_LPJ_G0024301.1 mouse_genomes_project 18 41938650 42057654 + MGP_LPJ_P0049409 Stk32a protein_coding protein_coding MGP_LPJ_T0049969.1 MGP_LPJ_G0024491.1 mouse_genomes_project 18 77810532 77811784 - MGP_LPJ_P0049969 Gm7276 protein_coding protein_coding MGP_LPJ_T0049284.1 MGP_LPJ_G0024262.1 mouse_genomes_project 18 36214334 36321810 + MGP_LPJ_P0049284 Pcdhga9 protein_coding protein_coding MGP_LPJ_T0049285.1 MGP_LPJ_G0024262.1 mouse_genomes_project 18 36214767 36217804 + Pcdhga9 protein_coding retained_intron MGP_LPJ_T0003818.1 MGP_LPJ_G0003432.1 mouse_genomes_project 18 35415037 35415430 - Gm38225 antisense antisense MGP_LPJ_T0049118.1 MGP_LPJ_G0024177.1 mouse_genomes_project 18 33968514 33987028 + MGP_LPJ_P0049118 Paip2 protein_coding protein_coding MGP_LPJ_T0049119.1 MGP_LPJ_G0024177.1 mouse_genomes_project 18 33968521 33986192 + MGP_LPJ_P0049119 Paip2 protein_coding protein_coding MGP_LPJ_T0049120.1 MGP_LPJ_G0024177.1 mouse_genomes_project 18 33968538 33986361 + MGP_LPJ_P0049120 Paip2 protein_coding protein_coding MGP_LPJ_T0049121.1 MGP_LPJ_G0024177.1 mouse_genomes_project 18 33968546 33987025 + MGP_LPJ_P0049121 Paip2 protein_coding protein_coding MGP_LPJ_T0049122.1 MGP_LPJ_G0024177.1 mouse_genomes_project 18 33969134 33986237 + MGP_LPJ_P0049122 Paip2 protein_coding protein_coding MGP_LPJ_T0049123.1 MGP_LPJ_G0024177.1 mouse_genomes_project 18 33980181 33983323 + Paip2 protein_coding retained_intron MGP_LPJ_T0049124.1 MGP_LPJ_G0024177.1 mouse_genomes_project 18 33980882 33983772 + Paip2 protein_coding retained_intron MGP_LPJ_T0049926.1 MGP_LPJ_G0024481.1 mouse_genomes_project 18 75553160 75839329 + MGP_LPJ_P0049926 Dym protein_coding protein_coding MGP_LPJ_T0013326.1 MGP_LPJ_G0011417.1 mouse_genomes_project 18 77849120 77850094 - processed_pseudogene processed_pseudogene MGP_LPJ_T0017574.1 MGP_LPJ_G0015279.1 mouse_genomes_project 18 36710090 36730709 + 2010320O07Rik processed_transcript processed_transcript MGP_LPJ_T0048761.1 MGP_LPJ_G0024042.1 mouse_genomes_project 18 3104221 3147543 - MGP_LPJ_P0048761 Kif5b protein_coding protein_coding MGP_LPJ_T0048762.1 MGP_LPJ_G0024042.1 mouse_genomes_project 18 3106401 3118504 - Kif5b protein_coding retained_intron MGP_LPJ_T0048763.1 MGP_LPJ_G0024042.1 mouse_genomes_project 18 3117395 3128017 - Kif5b protein_coding retained_intron MGP_LPJ_T0048764.1 MGP_LPJ_G0024042.1 mouse_genomes_project 18 3118532 3147490 - MGP_LPJ_P0048764 Kif5b protein_coding protein_coding MGP_LPJ_T0048765.1 MGP_LPJ_G0024042.1 mouse_genomes_project 18 3124844 3127030 - Kif5b protein_coding retained_intron MGP_LPJ_T0048766.1 MGP_LPJ_G0024042.1 mouse_genomes_project 18 3147333 3148193 - Kif5b protein_coding processed_transcript MGP_LPJ_T0049921.1 MGP_LPJ_G0024477.1 mouse_genomes_project 18 75292898 75321407 + MGP_LPJ_P0049921 Acaa2 protein_coding protein_coding MGP_LPJ_T0099251.1 MGP_LPJ_G0037514.1 mouse_genomes_project 18 12049626 12049790 - Gm24924 snRNA snRNA MGP_LPJ_T0049940.1 MGP_LPJ_G0024486.1 mouse_genomes_project 18 77457675 77503432 + MGP_LPJ_P0049940 Skor2 protein_coding protein_coding MGP_LPJ_T0011463.1 MGP_LPJ_G0009581.1 mouse_genomes_project 18 14627380 14627609 - Gm24015 misc_RNA misc_RNA MGP_LPJ_T0003807.1 MGP_LPJ_G0003424.1 mouse_genomes_project 18 7851498 7855642 - Mir133a-1hg antisense antisense MGP_LPJ_T0100525.1 MGP_LPJ_G0038788.1 mouse_genomes_project 18 89111895 89112029 - Gm24987 snoRNA snoRNA MGP_LPJ_T0007033.1 MGP_LPJ_G0005784.1 mouse_genomes_project 18 33113710 33120259 - Gm26538 lincRNA lincRNA MGP_LPJ_T0099262.1 MGP_LPJ_G0037525.1 mouse_genomes_project 18 50360000 50360107 - Gm25739 snRNA snRNA MGP_LPJ_T0049458.1 MGP_LPJ_G0024324.1 mouse_genomes_project 18 45374255 45400415 - MGP_LPJ_P0049458 Fem1c protein_coding protein_coding MGP_LPJ_T0049275.1 MGP_LPJ_G0024256.1 mouse_genomes_project 18 36171862 36321813 + MGP_LPJ_P0049275 Pcdhga5 protein_coding protein_coding MGP_LPJ_T0049322.1 MGP_LPJ_G0024274.1 mouse_genomes_project 18 36443943 36446980 - Fchsd1 protein_coding retained_intron MGP_LPJ_T0049323.1 MGP_LPJ_G0024274.1 mouse_genomes_project 18 36443946 36456284 - MGP_LPJ_P0049323 Fchsd1 protein_coding protein_coding MGP_LPJ_T0049324.1 MGP_LPJ_G0024274.1 mouse_genomes_project 18 36449472 36450570 - Fchsd1 protein_coding retained_intron MGP_LPJ_T0049325.1 MGP_LPJ_G0024274.1 mouse_genomes_project 18 36452166 36456279 - MGP_LPJ_P0049325 Fchsd1 protein_coding protein_coding MGP_LPJ_T0049326.1 MGP_LPJ_G0024274.1 mouse_genomes_project 18 36452204 36454258 - Fchsd1 protein_coding retained_intron MGP_LPJ_T0049327.1 MGP_LPJ_G0024274.1 mouse_genomes_project 18 36454126 36454562 - Fchsd1 protein_coding retained_intron MGP_LPJ_T0049328.1 MGP_LPJ_G0024274.1 mouse_genomes_project 18 36454147 36456279 - MGP_LPJ_P0049328 Fchsd1 protein_coding protein_coding MGP_LPJ_T0049329.1 MGP_LPJ_G0024274.1 mouse_genomes_project 18 36454148 36456267 - Fchsd1 protein_coding retained_intron MGP_LPJ_T0049330.1 MGP_LPJ_G0024274.1 mouse_genomes_project 18 36454313 36456279 - MGP_LPJ_P0049330 Fchsd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0049331.1 MGP_LPJ_G0024274.1 mouse_genomes_project 18 36454341 36456038 - Fchsd1 protein_coding retained_intron MGP_LPJ_T0011483.1 MGP_LPJ_G0009601.1 mouse_genomes_project 18 85703133 85703423 - Gm22014 misc_RNA misc_RNA MGP_LPJ_T0049189.1 MGP_LPJ_G0024198.1 mouse_genomes_project 18 35116805 35122667 + MGP_LPJ_P0049189 protein_coding protein_coding MGP_LPJ_T0049190.1 MGP_LPJ_G0024198.1 mouse_genomes_project 18 35117890 35122659 + MGP_LPJ_P0049190 protein_coding protein_coding MGP_LPJ_T0049191.1 MGP_LPJ_G0024198.1 mouse_genomes_project 18 35117903 35119281 + protein_coding processed_transcript MGP_LPJ_T0049192.1 MGP_LPJ_G0024198.1 mouse_genomes_project 18 35117903 35122664 + MGP_LPJ_P0049192 protein_coding protein_coding MGP_LPJ_T0049573.1 MGP_LPJ_G0024369.1 mouse_genomes_project 18 57294851 57364345 + MGP_LPJ_P0049573 Slc12a2 protein_coding protein_coding MGP_LPJ_T0049298.1 MGP_LPJ_G0024270.1 mouse_genomes_project 18 36297810 36321813 + MGP_LPJ_P0049298 Pcdhgc5 protein_coding protein_coding MGP_LPJ_T0049299.1 MGP_LPJ_G0024270.1 mouse_genomes_project 18 36297849 36319991 + MGP_LPJ_P0049299 Pcdhgc5 protein_coding protein_coding MGP_LPJ_T0049300.1 MGP_LPJ_G0024270.1 mouse_genomes_project 18 36297862 36320140 + MGP_LPJ_P0049300 Pcdhgc5 protein_coding protein_coding MGP_LPJ_T0049301.1 MGP_LPJ_G0024270.1 mouse_genomes_project 18 36297950 36320104 + Pcdhgc5 protein_coding retained_intron MGP_LPJ_T0049261.1 MGP_LPJ_G0024247.1 mouse_genomes_project 18 36000127 36007091 + MGP_LPJ_P0049261 Pcdhb22 protein_coding protein_coding MGP_LPJ_T0049262.1 MGP_LPJ_G0024247.1 mouse_genomes_project 18 36000615 36003757 + MGP_LPJ_P0049262 Pcdhb22 protein_coding protein_coding MGP_LPJ_T0050057.1 MGP_LPJ_G0024520.1 mouse_genomes_project 18 83446564 83552383 - MGP_LPJ_P0050057 Zfp236 protein_coding protein_coding MGP_LPJ_T0050058.1 MGP_LPJ_G0024520.1 mouse_genomes_project 18 83448445 83472829 - MGP_LPJ_P0050058 Zfp236 protein_coding nonsense_mediated_decay MGP_LPJ_T0050059.1 MGP_LPJ_G0024520.1 mouse_genomes_project 18 83450124 83552327 - MGP_LPJ_P0050059 Zfp236 protein_coding nonsense_mediated_decay MGP_LPJ_T0050060.1 MGP_LPJ_G0024520.1 mouse_genomes_project 18 83450124 83552327 - MGP_LPJ_P0050060 Zfp236 protein_coding protein_coding MGP_LPJ_T0050061.1 MGP_LPJ_G0024520.1 mouse_genomes_project 18 83450603 83543638 - MGP_LPJ_P0050061 Zfp236 protein_coding unknown_likely_coding MGP_LPJ_T0050062.1 MGP_LPJ_G0024520.1 mouse_genomes_project 18 83493843 83495025 - Zfp236 protein_coding retained_intron MGP_LPJ_T0050063.1 MGP_LPJ_G0024520.1 mouse_genomes_project 18 83540418 83551390 - MGP_LPJ_P0050063 Zfp236 protein_coding protein_coding MGP_LPJ_T0099275.1 MGP_LPJ_G0037538.1 mouse_genomes_project 18 67303171 67303264 - Gm23512 snRNA snRNA MGP_LPJ_T0010283.1 MGP_LPJ_G0008401.1 mouse_genomes_project 18 68466438 68466492 - Mir7219 miRNA miRNA MGP_LPJ_T0049673.1 MGP_LPJ_G0024406.1 mouse_genomes_project 18 62002505 62004650 - MGP_LPJ_P0049673 Adrb2 protein_coding protein_coding MGP_LPJ_T0049935.1 MGP_LPJ_G0024485.1 mouse_genomes_project 18 76867570 76931667 + MGP_LPJ_P0049935 Smad2 protein_coding protein_coding MGP_LPJ_T0049936.1 MGP_LPJ_G0024485.1 mouse_genomes_project 18 76867776 76931667 + MGP_LPJ_P0049936 Smad2 protein_coding protein_coding MGP_LPJ_T0049937.1 MGP_LPJ_G0024485.1 mouse_genomes_project 18 76867915 76925387 + MGP_LPJ_P0049937 Smad2 protein_coding protein_coding MGP_LPJ_T0049938.1 MGP_LPJ_G0024485.1 mouse_genomes_project 18 76888221 76929579 + MGP_LPJ_P0049938 Smad2 protein_coding protein_coding MGP_LPJ_T0049939.1 MGP_LPJ_G0024485.1 mouse_genomes_project 18 76888221 76926774 + MGP_LPJ_P0049939 Smad2 protein_coding protein_coding MGP_LPJ_T0049991.1 MGP_LPJ_G0024498.1 mouse_genomes_project 18 78508959 78601671 + MGP_LPJ_P0049991 Pstpip2 protein_coding protein_coding MGP_LPJ_T0003846.1 MGP_LPJ_G0003452.1 mouse_genomes_project 18 70287429 70290117 + 4930448D08Rik antisense antisense MGP_LPJ_T0007055.1 MGP_LPJ_G0005800.1 mouse_genomes_project 18 67953265 67954411 - Gm26910 lincRNA lincRNA MGP_LPJ_T0003833.1 MGP_LPJ_G0003446.1 mouse_genomes_project 18 44503988 44713832 - antisense antisense MGP_LPJ_T0003834.1 MGP_LPJ_G0003446.1 mouse_genomes_project 18 44505630 44679472 - antisense antisense MGP_LPJ_T0049905.1 MGP_LPJ_G0024474.1 mouse_genomes_project 18 74754776 74764178 + MGP_LPJ_P0049905 Mbd1 protein_coding unknown_likely_coding MGP_LPJ_T0049906.1 MGP_LPJ_G0024474.1 mouse_genomes_project 18 74754867 74769308 + MGP_LPJ_P0049906 Mbd1 protein_coding protein_coding MGP_LPJ_T0049282.1 MGP_LPJ_G0024261.1 mouse_genomes_project 18 36208407 36321813 + MGP_LPJ_P0049282 Pcdhgb5 protein_coding protein_coding MGP_LPJ_T0049283.1 MGP_LPJ_G0024261.1 mouse_genomes_project 18 36208452 36213021 + Pcdhgb5 protein_coding retained_intron MGP_LPJ_T0011462.1 MGP_LPJ_G0009580.1 mouse_genomes_project 18 13688511 13688861 - Gm24385 misc_RNA misc_RNA MGP_LPJ_T0049164.1 MGP_LPJ_G0024192.1 mouse_genomes_project 18 34828517 34881813 - MGP_LPJ_P0049164 Pfdn1 protein_coding protein_coding MGP_LPJ_T0048902.1 MGP_LPJ_G0024089.1 mouse_genomes_project 18 17646529 17675591 - MGP_LPJ_P0048902 Dsc2 protein_coding protein_coding MGP_LPJ_T0048903.1 MGP_LPJ_G0024089.1 mouse_genomes_project 18 17646529 17675667 - MGP_LPJ_P0048903 Dsc2 protein_coding protein_coding MGP_LPJ_T0048904.1 MGP_LPJ_G0024089.1 mouse_genomes_project 18 17647239 17654234 - MGP_LPJ_P0048904 Dsc2 protein_coding protein_coding MGP_LPJ_T0048905.1 MGP_LPJ_G0024089.1 mouse_genomes_project 18 17647374 17675622 - MGP_LPJ_P0048905 Dsc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0010260.1 MGP_LPJ_G0008378.1 mouse_genomes_project 18 34347434 34347518 + Gm23882 miRNA miRNA MGP_LPJ_T0098013.1 MGP_LPJ_G0036294.1 mouse_genomes_project 18 74799245 74799810 - pseudogene pseudogene MGP_LPJ_T0049129.1 MGP_LPJ_G0024179.1 mouse_genomes_project 18 34022733 34024835 - MGP_LPJ_P0049129 Mzb1 protein_coding protein_coding MGP_LPJ_T0048956.1 MGP_LPJ_G0024112.1 mouse_genomes_project 18 21994369 22010306 - MGP_LPJ_P0048956 Ino80c protein_coding protein_coding MGP_LPJ_T0048957.1 MGP_LPJ_G0024112.1 mouse_genomes_project 18 21994375 22010458 - MGP_LPJ_P0048957 Ino80c protein_coding protein_coding MGP_LPJ_T0048958.1 MGP_LPJ_G0024112.1 mouse_genomes_project 18 21995992 22010340 - MGP_LPJ_P0048958 Ino80c protein_coding protein_coding MGP_LPJ_T0049396.1 MGP_LPJ_G0024295.1 mouse_genomes_project 18 40891604 40954529 - MGP_LPJ_P0049396 Lars protein_coding protein_coding MGP_LPJ_T0100518.1 MGP_LPJ_G0038781.1 mouse_genomes_project 18 75424793 75424914 - Gm24559 snoRNA snoRNA MGP_LPJ_T0048859.1 MGP_LPJ_G0024073.1 mouse_genomes_project 18 9924383 9973275 + Ttc39c protein_coding retained_intron MGP_LPJ_T0048860.1 MGP_LPJ_G0024073.1 mouse_genomes_project 18 9924925 10019171 + MGP_LPJ_P0048860 Ttc39c protein_coding protein_coding MGP_LPJ_T0048861.1 MGP_LPJ_G0024073.1 mouse_genomes_project 18 10017123 10019238 + Ttc39c protein_coding retained_intron MGP_LPJ_T0048973.1 MGP_LPJ_G0024119.1 mouse_genomes_project 18 22632163 22632472 - MGP_LPJ_P0048973 Gm9955 protein_coding protein_coding MGP_LPJ_T0049977.1 MGP_LPJ_G0024494.1 mouse_genomes_project 18 78115366 78232655 - MGP_LPJ_P0049977 Rnf165 protein_coding protein_coding MGP_LPJ_T0049978.1 MGP_LPJ_G0024494.1 mouse_genomes_project 18 78123380 78155432 - MGP_LPJ_P0049978 Rnf165 protein_coding protein_coding MGP_LPJ_T0049979.1 MGP_LPJ_G0024494.1 mouse_genomes_project 18 78123939 78130108 - Rnf165 protein_coding retained_intron MGP_LPJ_T0049980.1 MGP_LPJ_G0024494.1 mouse_genomes_project 18 78129696 78232569 - MGP_LPJ_P0049980 Rnf165 protein_coding protein_coding MGP_LPJ_T0049981.1 MGP_LPJ_G0024494.1 mouse_genomes_project 18 78131274 78171314 - Rnf165 protein_coding processed_transcript MGP_LPJ_T0049982.1 MGP_LPJ_G0024494.1 mouse_genomes_project 18 78229611 78232127 - Rnf165 protein_coding retained_intron MGP_LPJ_T0049983.1 MGP_LPJ_G0024494.1 mouse_genomes_project 18 78230648 78232624 - MGP_LPJ_P0049983 Rnf165 protein_coding protein_coding MGP_LPJ_T0048703.1 MGP_LPJ_G0024032.1 mouse_genomes_project 18 220352 284400 + MGP_LPJ_P0048703 Cul2 protein_coding protein_coding MGP_LPJ_T0048704.1 MGP_LPJ_G0024032.1 mouse_genomes_project 18 220589 283411 + MGP_LPJ_P0048704 Cul2 protein_coding nonsense_mediated_decay MGP_LPJ_T0048705.1 MGP_LPJ_G0024032.1 mouse_genomes_project 18 220596 284403 + MGP_LPJ_P0048705 Cul2 protein_coding protein_coding MGP_LPJ_T0048706.1 MGP_LPJ_G0024032.1 mouse_genomes_project 18 220621 279557 + MGP_LPJ_P0048706 Cul2 protein_coding protein_coding MGP_LPJ_T0048707.1 MGP_LPJ_G0024032.1 mouse_genomes_project 18 272475 275274 + Cul2 protein_coding processed_transcript MGP_LPJ_T0048708.1 MGP_LPJ_G0024032.1 mouse_genomes_project 18 281909 283039 + Cul2 protein_coding processed_transcript MGP_LPJ_T0013319.1 MGP_LPJ_G0011410.1 mouse_genomes_project 18 55021750 55022728 - processed_pseudogene processed_pseudogene MGP_LPJ_T0011459.1 MGP_LPJ_G0009577.1 mouse_genomes_project 18 752331 752654 + Gm24632 misc_RNA misc_RNA MGP_LPJ_T0049390.1 MGP_LPJ_G0024292.1 mouse_genomes_project 18 40727651 40844297 + MGP_LPJ_P0049390 Sh3rf2 protein_coding protein_coding MGP_LPJ_T0049391.1 MGP_LPJ_G0024292.1 mouse_genomes_project 18 40727694 40843788 + MGP_LPJ_P0049391 Sh3rf2 protein_coding protein_coding MGP_LPJ_T0049392.1 MGP_LPJ_G0024292.1 mouse_genomes_project 18 40826520 40841464 + Sh3rf2 protein_coding processed_transcript MGP_LPJ_T0049393.1 MGP_LPJ_G0024292.1 mouse_genomes_project 18 40826608 40838479 + Sh3rf2 protein_coding processed_transcript MGP_LPJ_T0010256.1 MGP_LPJ_G0008374.1 mouse_genomes_project 18 22343090 22343151 - Mir187 miRNA miRNA MGP_LPJ_T0049986.1 MGP_LPJ_G0024497.1 mouse_genomes_project 18 78486923 78496069 + MGP_LPJ_P0049986 Atp5a1 protein_coding protein_coding MGP_LPJ_T0049987.1 MGP_LPJ_G0024497.1 mouse_genomes_project 18 78487150 78496066 + MGP_LPJ_P0049987 Atp5a1 protein_coding protein_coding MGP_LPJ_T0049988.1 MGP_LPJ_G0024497.1 mouse_genomes_project 18 78487186 78495855 + MGP_LPJ_P0049988 Atp5a1 protein_coding nonsense_mediated_decay MGP_LPJ_T0049989.1 MGP_LPJ_G0024497.1 mouse_genomes_project 18 78492154 78494299 + Atp5a1 protein_coding retained_intron MGP_LPJ_T0049990.1 MGP_LPJ_G0024497.1 mouse_genomes_project 18 78493031 78495089 + Atp5a1 protein_coding retained_intron MGP_LPJ_T0049422.1 MGP_LPJ_G0024307.1 mouse_genomes_project 18 42727072 42788890 + MGP_LPJ_P0049422 Spink5 protein_coding protein_coding MGP_LPJ_T0049234.1 MGP_LPJ_G0024223.1 mouse_genomes_project 18 35501078 35676922 + MGP_LPJ_P0049234 Pcdha12 protein_coding protein_coding MGP_LPJ_T0049553.1 MGP_LPJ_G0024361.1 mouse_genomes_project 18 55922307 55930980 + MGP_LPJ_P0049553 Tex43 protein_coding protein_coding MGP_LPJ_T0049554.1 MGP_LPJ_G0024361.1 mouse_genomes_project 18 55922336 55928927 + MGP_LPJ_P0049554 Tex43 protein_coding protein_coding MGP_LPJ_T0049555.1 MGP_LPJ_G0024361.1 mouse_genomes_project 18 55922346 55930910 + MGP_LPJ_P0049555 Tex43 protein_coding nonsense_mediated_decay MGP_LPJ_T0049556.1 MGP_LPJ_G0024361.1 mouse_genomes_project 18 55922383 55930980 + MGP_LPJ_P0049556 Tex43 protein_coding protein_coding MGP_LPJ_T0100515.1 MGP_LPJ_G0038778.1 mouse_genomes_project 18 63410075 63410219 + Gm22210 snoRNA snoRNA MGP_LPJ_T0011474.1 MGP_LPJ_G0009592.1 mouse_genomes_project 18 41284440 41284596 + Gm27457 misc_RNA misc_RNA MGP_LPJ_T0013325.1 MGP_LPJ_G0011416.1 mouse_genomes_project 18 74799458 74799866 - processed_pseudogene processed_pseudogene MGP_LPJ_T0007018.1 MGP_LPJ_G0005774.1 mouse_genomes_project 18 14502083 14638352 + 1700001G01Rik lincRNA lincRNA MGP_LPJ_T0007019.1 MGP_LPJ_G0005774.1 mouse_genomes_project 18 14502108 14535051 + 1700001G01Rik lincRNA lincRNA MGP_LPJ_T0007020.1 MGP_LPJ_G0005774.1 mouse_genomes_project 18 14518803 14638352 + 1700001G01Rik lincRNA lincRNA MGP_LPJ_T0007021.1 MGP_LPJ_G0005774.1 mouse_genomes_project 18 14626596 14638308 + 1700001G01Rik lincRNA lincRNA MGP_LPJ_T0013317.1 MGP_LPJ_G0011408.1 mouse_genomes_project 18 52130565 52131122 + processed_pseudogene processed_pseudogene MGP_LPJ_T0001042.1 MGP_LPJ_G0000967.1 mouse_genomes_project 18 65607046 65608307 + TEC TEC MGP_LPJ_T0049013.1 MGP_LPJ_G0024140.1 mouse_genomes_project 18 30376836 30455581 + MGP_LPJ_P0049013 Map3k2 protein_coding protein_coding MGP_LPJ_T0100504.1 MGP_LPJ_G0038767.1 mouse_genomes_project 18 32366697 32366823 + Gm24432 snoRNA snoRNA MGP_LPJ_T0049751.1 MGP_LPJ_G0024431.1 mouse_genomes_project 18 65969537 65973989 - MGP_LPJ_P0049751 Rax protein_coding protein_coding MGP_LPJ_T0050005.1 MGP_LPJ_G0024509.1 mouse_genomes_project 18 80984117 80988872 + Gm16286 protein_coding processed_transcript MGP_LPJ_T0050007.1 MGP_LPJ_G0024509.1 mouse_genomes_project 18 80984150 80990112 + MGP_LPJ_P0050007 Gm16286 protein_coding protein_coding MGP_LPJ_T0050008.1 MGP_LPJ_G0024509.1 mouse_genomes_project 18 80984182 80988146 + Gm16286 protein_coding retained_intron MGP_LPJ_T0050009.1 MGP_LPJ_G0024509.1 mouse_genomes_project 18 80984198 80985139 + Gm16286 protein_coding retained_intron MGP_LPJ_T0050011.1 MGP_LPJ_G0024509.1 mouse_genomes_project 18 80984219 80990103 + MGP_LPJ_P0050011 Gm16286 protein_coding protein_coding MGP_LPJ_T0050013.1 MGP_LPJ_G0024509.1 mouse_genomes_project 18 80984247 80990121 + MGP_LPJ_P0050013 Gm16286 protein_coding protein_coding MGP_LPJ_T0050014.1 MGP_LPJ_G0024509.1 mouse_genomes_project 18 80984265 80985047 + Gm16286 protein_coding retained_intron MGP_LPJ_T0050015.1 MGP_LPJ_G0024509.1 mouse_genomes_project 18 80984270 80985139 + Gm16286 protein_coding retained_intron MGP_LPJ_T0050016.1 MGP_LPJ_G0024509.1 mouse_genomes_project 18 80984612 80988866 + Gm16286 protein_coding processed_transcript MGP_LPJ_T0049220.1 MGP_LPJ_G0024213.1 mouse_genomes_project 18 35415089 35425472 + MGP_LPJ_P0049220 Pcdha6 protein_coding protein_coding MGP_LPJ_T0050002.1 MGP_LPJ_G0024506.1 mouse_genomes_project 18 80856991 80857684 - MGP_LPJ_P0050002 protein_coding protein_coding MGP_LPJ_T0048718.1 MGP_LPJ_G0024037.1 mouse_genomes_project 18 1572301 1620190 + MGP_LPJ_P0048718 9430020K01Rik protein_coding protein_coding MGP_LPJ_T0099273.1 MGP_LPJ_G0037536.1 mouse_genomes_project 18 64728693 64728793 - Gm24504 snRNA snRNA MGP_LPJ_T0010280.1 MGP_LPJ_G0008398.1 mouse_genomes_project 18 61406051 61406114 - Mir143 miRNA miRNA MGP_LPJ_T0049054.1 MGP_LPJ_G0024156.1 mouse_genomes_project 18 32841277 32847229 + MGP_LPJ_P0049054 Wnt8a protein_coding protein_coding MGP_LPJ_T0049771.1 MGP_LPJ_G0024442.1 mouse_genomes_project 18 67558511 67603838 - MGP_LPJ_P0049771 Afg3l2 protein_coding protein_coding MGP_LPJ_T0049292.1 MGP_LPJ_G0024268.1 mouse_genomes_project 18 36284721 36288101 + Pcdhgc3 protein_coding retained_intron MGP_LPJ_T0049293.1 MGP_LPJ_G0024268.1 mouse_genomes_project 18 36284767 36321813 + MGP_LPJ_P0049293 Pcdhgc3 protein_coding protein_coding MGP_LPJ_T0049294.1 MGP_LPJ_G0024268.1 mouse_genomes_project 18 36284773 36321813 + MGP_LPJ_P0049294 Pcdhgc3 protein_coding nonsense_mediated_decay MGP_LPJ_T0100496.1 MGP_LPJ_G0038759.1 mouse_genomes_project 18 14517957 14518087 + Gm22470 snoRNA snoRNA MGP_LPJ_T0048837.1 MGP_LPJ_G0024068.1 mouse_genomes_project 18 9381981 9409945 + MGP_LPJ_P0048837 Riok3 protein_coding protein_coding MGP_LPJ_T0049349.1 MGP_LPJ_G0024281.1 mouse_genomes_project 18 36930807 36976281 + MGP_LPJ_P0049349 Ndfip1 protein_coding protein_coding MGP_LPJ_T0010257.1 MGP_LPJ_G0008375.1 mouse_genomes_project 18 31116725 31116826 - Mir6361 miRNA miRNA MGP_LPJ_T0049165.1 MGP_LPJ_G0024193.1 mouse_genomes_project 18 34926640 34937510 - MGP_LPJ_P0049165 Hbegf protein_coding protein_coding MGP_LPJ_T0049105.1 MGP_LPJ_G0024176.1 mouse_genomes_project 18 33929841 33940179 + MGP_LPJ_P0049105 Matr3 protein_coding protein_coding MGP_LPJ_T0049106.1 MGP_LPJ_G0024176.1 mouse_genomes_project 18 33929887 33939812 + MGP_LPJ_P0049106 Matr3 protein_coding protein_coding MGP_LPJ_T0049107.1 MGP_LPJ_G0024176.1 mouse_genomes_project 18 33929906 33958291 + MGP_LPJ_P0049107 Matr3 protein_coding protein_coding MGP_LPJ_T0049108.1 MGP_LPJ_G0024176.1 mouse_genomes_project 18 33929912 33958314 + MGP_LPJ_P0049108 Matr3 protein_coding nonsense_mediated_decay MGP_LPJ_T0049109.1 MGP_LPJ_G0024176.1 mouse_genomes_project 18 33929914 33958274 + MGP_LPJ_P0049109 Matr3 protein_coding protein_coding MGP_LPJ_T0049110.1 MGP_LPJ_G0024176.1 mouse_genomes_project 18 33929994 33958222 + MGP_LPJ_P0049110 Matr3 protein_coding protein_coding MGP_LPJ_T0049111.1 MGP_LPJ_G0024176.1 mouse_genomes_project 18 33930182 33946697 + MGP_LPJ_P0049111 Matr3 protein_coding protein_coding MGP_LPJ_T0049112.1 MGP_LPJ_G0024176.1 mouse_genomes_project 18 33930378 33939892 + MGP_LPJ_P0049112 Matr3 protein_coding protein_coding MGP_LPJ_T0049113.1 MGP_LPJ_G0024176.1 mouse_genomes_project 18 33930384 33946982 + MGP_LPJ_P0049113 Matr3 protein_coding protein_coding MGP_LPJ_T0049114.1 MGP_LPJ_G0024176.1 mouse_genomes_project 18 33939615 33941396 + Matr3 protein_coding retained_intron MGP_LPJ_T0049115.1 MGP_LPJ_G0024176.1 mouse_genomes_project 18 33939712 33959435 + MGP_LPJ_P0049115 Matr3 protein_coding protein_coding MGP_LPJ_T0049116.1 MGP_LPJ_G0024176.1 mouse_genomes_project 18 33945589 33946965 + Matr3 protein_coding retained_intron MGP_LPJ_T0049117.1 MGP_LPJ_G0024176.1 mouse_genomes_project 18 33946715 33948415 + Matr3 protein_coding retained_intron MGP_LPJ_T0098011.1 MGP_LPJ_G0036292.1 mouse_genomes_project 18 60104334 60104977 + pseudogene pseudogene MGP_LPJ_T0049135.1 MGP_LPJ_G0024182.1 mouse_genomes_project 18 34048225 34085376 - MGP_LPJ_P0049135 Dnajc18 protein_coding protein_coding MGP_LPJ_T0049752.1 MGP_LPJ_G0024432.1 mouse_genomes_project 18 65991515 66006578 - MGP_LPJ_P0049752 Cplx4 protein_coding protein_coding MGP_LPJ_T0050036.1 MGP_LPJ_G0024515.1 mouse_genomes_project 18 81394121 81499325 - MGP_LPJ_P0050036 Nfatc1 protein_coding protein_coding MGP_LPJ_T0050037.1 MGP_LPJ_G0024515.1 mouse_genomes_project 18 81394121 81504216 - MGP_LPJ_P0050037 Nfatc1 protein_coding protein_coding MGP_LPJ_T0050038.1 MGP_LPJ_G0024515.1 mouse_genomes_project 18 81394121 81504216 - MGP_LPJ_P0050038 Nfatc1 protein_coding protein_coding MGP_LPJ_T0050039.1 MGP_LPJ_G0024515.1 mouse_genomes_project 18 81435306 81499325 - MGP_LPJ_P0050039 Nfatc1 protein_coding protein_coding MGP_LPJ_T0048896.1 MGP_LPJ_G0024086.1 mouse_genomes_project 18 13280137 13280828 + MGP_LPJ_P0048896 Gm10036 protein_coding protein_coding MGP_LPJ_T0049927.1 MGP_LPJ_G0024482.1 mouse_genomes_project 18 75934387 75966040 + MGP_LPJ_P0049927 Smad7 protein_coding protein_coding MGP_LPJ_T0049928.1 MGP_LPJ_G0024482.1 mouse_genomes_project 18 75935745 75965584 + MGP_LPJ_P0049928 Smad7 protein_coding protein_coding MGP_LPJ_T0049929.1 MGP_LPJ_G0024482.1 mouse_genomes_project 18 75935852 75964097 + MGP_LPJ_P0049929 Smad7 protein_coding protein_coding MGP_LPJ_T0049930.1 MGP_LPJ_G0024482.1 mouse_genomes_project 18 75936838 75964476 + MGP_LPJ_P0049930 Smad7 protein_coding protein_coding MGP_LPJ_T0049931.1 MGP_LPJ_G0024482.1 mouse_genomes_project 18 75941773 75964112 + Smad7 protein_coding processed_transcript MGP_LPJ_T0003835.1 MGP_LPJ_G0003447.1 mouse_genomes_project 18 56121500 56157539 + Gm15345 antisense antisense MGP_LPJ_T0049376.1 MGP_LPJ_G0024285.1 mouse_genomes_project 18 37985460 38067761 - MGP_LPJ_P0049376 Nr3c1 protein_coding protein_coding MGP_LPJ_T0049377.1 MGP_LPJ_G0024285.1 mouse_genomes_project 18 37985462 38064345 - MGP_LPJ_P0049377 Nr3c1 protein_coding protein_coding MGP_LPJ_T0049378.1 MGP_LPJ_G0024285.1 mouse_genomes_project 18 37986903 38066934 - MGP_LPJ_P0049378 Nr3c1 protein_coding protein_coding MGP_LPJ_T0049379.1 MGP_LPJ_G0024285.1 mouse_genomes_project 18 37989398 38064332 - MGP_LPJ_P0049379 Nr3c1 protein_coding protein_coding MGP_LPJ_T0049380.1 MGP_LPJ_G0024285.1 mouse_genomes_project 18 38001422 38066976 - MGP_LPJ_P0049380 Nr3c1 protein_coding protein_coding MGP_LPJ_T0049381.1 MGP_LPJ_G0024285.1 mouse_genomes_project 18 38063970 38069632 - MGP_LPJ_P0049381 Nr3c1 protein_coding protein_coding MGP_LPJ_T0049382.1 MGP_LPJ_G0024285.1 mouse_genomes_project 18 38064185 38066371 - MGP_LPJ_P0049382 Nr3c1 protein_coding protein_coding MGP_LPJ_T0049383.1 MGP_LPJ_G0024285.1 mouse_genomes_project 18 38064259 38069630 - MGP_LPJ_P0049383 Nr3c1 protein_coding protein_coding MGP_LPJ_T0100524.1 MGP_LPJ_G0038787.1 mouse_genomes_project 18 82810698 82810826 + Gm26012 snoRNA snoRNA MGP_LPJ_T0048888.1 MGP_LPJ_G0024081.1 mouse_genomes_project 18 12113938 12164131 + MGP_LPJ_P0048888 Psma8 protein_coding protein_coding MGP_LPJ_T0003809.1 MGP_LPJ_G0003426.1 mouse_genomes_project 18 9769595 9772828 - Gm29200 antisense antisense MGP_LPJ_T0049302.1 MGP_LPJ_G0024271.1 mouse_genomes_project 18 36323540 36422026 - MGP_LPJ_P0049302 Diaph1 protein_coding protein_coding MGP_LPJ_T0049303.1 MGP_LPJ_G0024271.1 mouse_genomes_project 18 36323542 36421931 - MGP_LPJ_P0049303 Diaph1 protein_coding protein_coding MGP_LPJ_T0049304.1 MGP_LPJ_G0024271.1 mouse_genomes_project 18 36323542 36421973 - MGP_LPJ_P0049304 Diaph1 protein_coding protein_coding MGP_LPJ_T0049305.1 MGP_LPJ_G0024271.1 mouse_genomes_project 18 36323544 36391932 - MGP_LPJ_P0049305 Diaph1 protein_coding protein_coding MGP_LPJ_T0049306.1 MGP_LPJ_G0024271.1 mouse_genomes_project 18 36324763 36421961 - MGP_LPJ_P0049306 Diaph1 protein_coding protein_coding MGP_LPJ_T0049307.1 MGP_LPJ_G0024271.1 mouse_genomes_project 18 36325039 36333335 - Diaph1 protein_coding processed_transcript MGP_LPJ_T0049308.1 MGP_LPJ_G0024271.1 mouse_genomes_project 18 36334368 36421868 - MGP_LPJ_P0049308 Diaph1 protein_coding unknown_likely_coding MGP_LPJ_T0049309.1 MGP_LPJ_G0024271.1 mouse_genomes_project 18 36335412 36336072 - Diaph1 protein_coding retained_intron MGP_LPJ_T0049310.1 MGP_LPJ_G0024271.1 mouse_genomes_project 18 36381804 36383590 - Diaph1 protein_coding retained_intron MGP_LPJ_T0049474.1 MGP_LPJ_G0024334.1 mouse_genomes_project 18 46152558 46198068 - MGP_LPJ_P0049474 Sema6a protein_coding protein_coding MGP_LPJ_T0049475.1 MGP_LPJ_G0024334.1 mouse_genomes_project 18 46162171 46288504 - MGP_LPJ_P0049475 Sema6a protein_coding protein_coding MGP_LPJ_T0049476.1 MGP_LPJ_G0024334.1 mouse_genomes_project 18 46162172 46288542 - MGP_LPJ_P0049476 Sema6a protein_coding protein_coding MGP_LPJ_T0049477.1 MGP_LPJ_G0024334.1 mouse_genomes_project 18 46164348 46288120 - MGP_LPJ_P0049477 Sema6a protein_coding protein_coding MGP_LPJ_T0049478.1 MGP_LPJ_G0024334.1 mouse_genomes_project 18 46164350 46288122 - MGP_LPJ_P0049478 Sema6a protein_coding protein_coding MGP_LPJ_T0049479.1 MGP_LPJ_G0024334.1 mouse_genomes_project 18 46165288 46250515 - MGP_LPJ_P0049479 Sema6a protein_coding protein_coding MGP_LPJ_T0049480.1 MGP_LPJ_G0024334.1 mouse_genomes_project 18 46192514 46288542 - Sema6a protein_coding retained_intron MGP_LPJ_T0049481.1 MGP_LPJ_G0024334.1 mouse_genomes_project 18 46192529 46288544 - Sema6a protein_coding retained_intron MGP_LPJ_T0049482.1 MGP_LPJ_G0024334.1 mouse_genomes_project 18 46207786 46250493 - MGP_LPJ_P0049482 Sema6a protein_coding protein_coding MGP_LPJ_T0049483.1 MGP_LPJ_G0024334.1 mouse_genomes_project 18 46219541 46287942 - Sema6a protein_coding retained_intron MGP_LPJ_T0049447.1 MGP_LPJ_G0024320.1 mouse_genomes_project 18 44079516 44099881 + Kcnn2 protein_coding processed_transcript MGP_LPJ_T0049448.1 MGP_LPJ_G0024320.1 mouse_genomes_project 18 44079661 44506382 + MGP_LPJ_P0049448 Kcnn2 protein_coding protein_coding MGP_LPJ_T0049449.1 MGP_LPJ_G0024320.1 mouse_genomes_project 18 44079661 44506523 + MGP_LPJ_P0049449 Kcnn2 protein_coding protein_coding MGP_LPJ_T0049450.1 MGP_LPJ_G0024320.1 mouse_genomes_project 18 44379117 44491327 + Kcnn2 protein_coding retained_intron MGP_LPJ_T0049451.1 MGP_LPJ_G0024320.1 mouse_genomes_project 18 44379459 44412637 + Kcnn2 protein_coding retained_intron MGP_LPJ_T0049452.1 MGP_LPJ_G0024320.1 mouse_genomes_project 18 44379802 44495866 + Kcnn2 protein_coding processed_transcript MGP_LPJ_T0049453.1 MGP_LPJ_G0024320.1 mouse_genomes_project 18 44379802 44506381 + MGP_LPJ_P0049453 Kcnn2 protein_coding protein_coding MGP_LPJ_T0049664.1 MGP_LPJ_G0024402.1 mouse_genomes_project 18 61493114 61555102 - MGP_LPJ_P0049664 Afap1l1 protein_coding protein_coding MGP_LPJ_T0049665.1 MGP_LPJ_G0024402.1 mouse_genomes_project 18 61493114 61555011 - MGP_LPJ_P0049665 Afap1l1 protein_coding nonsense_mediated_decay MGP_LPJ_T0049666.1 MGP_LPJ_G0024402.1 mouse_genomes_project 18 61493792 61555060 - Afap1l1 protein_coding retained_intron MGP_LPJ_T0049425.1 MGP_LPJ_G0024309.1 mouse_genomes_project 18 42830182 42842389 + MGP_LPJ_P0049425 Spink6 protein_coding protein_coding MGP_LPJ_T0003851.1 MGP_LPJ_G0003456.1 mouse_genomes_project 18 85829005 85829902 - Gm16146 antisense antisense MGP_LPJ_T0049253.1 MGP_LPJ_G0024239.1 mouse_genomes_project 18 35923022 35931723 + MGP_LPJ_P0049253 Pcdhb14 protein_coding protein_coding MGP_LPJ_T0099271.1 MGP_LPJ_G0037534.1 mouse_genomes_project 18 63791558 63791633 - Gm24384 snRNA snRNA MGP_LPJ_T0010276.1 MGP_LPJ_G0008394.1 mouse_genomes_project 18 60825941 60826005 + Mir6983 miRNA miRNA MGP_LPJ_T0098706.1 MGP_LPJ_G0036971.1 mouse_genomes_project 18 81779250 81788234 - Gm27238 sense_overlapping sense_overlapping MGP_LPJ_T0049400.1 MGP_LPJ_G0024298.1 mouse_genomes_project 18 41219680 41285783 + MGP_LPJ_P0049400 Tcerg1 protein_coding protein_coding MGP_LPJ_T0049401.1 MGP_LPJ_G0024298.1 mouse_genomes_project 18 41219693 41285076 + MGP_LPJ_P0049401 Tcerg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0098012.1 MGP_LPJ_G0036293.1 mouse_genomes_project 18 60120145 60122179 + pseudogene pseudogene MGP_LPJ_T0013288.1 MGP_LPJ_G0011379.1 mouse_genomes_project 18 10024843 10025634 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010264.1 MGP_LPJ_G0008382.1 mouse_genomes_project 18 36477303 36477362 - Mir6980 miRNA miRNA MGP_LPJ_T0011460.1 MGP_LPJ_G0009578.1 mouse_genomes_project 18 10265689 10265996 + Gm26407 misc_RNA misc_RNA MGP_LPJ_T0048852.1 MGP_LPJ_G0024071.1 mouse_genomes_project 18 9515123 9573523 - MGP_LPJ_P0048852 Ankrd29 protein_coding protein_coding MGP_LPJ_T0048853.1 MGP_LPJ_G0024071.1 mouse_genomes_project 18 9515126 9535987 - Ankrd29 protein_coding processed_transcript MGP_LPJ_T0048854.1 MGP_LPJ_G0024071.1 mouse_genomes_project 18 9517302 9573450 - MGP_LPJ_P0048854 Ankrd29 protein_coding protein_coding MGP_LPJ_T0048855.1 MGP_LPJ_G0024071.1 mouse_genomes_project 18 9542156 9573532 - MGP_LPJ_P0048855 Ankrd29 protein_coding protein_coding MGP_LPJ_T0007040.1 MGP_LPJ_G0005789.1 mouse_genomes_project 18 48521133 48522285 + 1700044K03Rik lincRNA lincRNA MGP_LPJ_T0049587.1 MGP_LPJ_G0024377.1 mouse_genomes_project 18 59910855 59919908 + MGP_LPJ_P0049587 F830016B08Rik protein_coding protein_coding MGP_LPJ_T0013291.1 MGP_LPJ_G0011382.1 mouse_genomes_project 18 14331281 14331922 - processed_pseudogene processed_pseudogene MGP_LPJ_T0048834.1 MGP_LPJ_G0024066.1 mouse_genomes_project 18 9067568 9180520 + MGP_LPJ_P0048834 Cables1 protein_coding protein_coding MGP_LPJ_T0049416.1 MGP_LPJ_G0024303.1 mouse_genomes_project 18 42275945 42438169 - MGP_LPJ_P0049416 Jakmip2 protein_coding protein_coding MGP_LPJ_T0049061.1 MGP_LPJ_G0024159.1 mouse_genomes_project 18 32903684 32929576 - MGP_LPJ_P0049061 Brd8 protein_coding protein_coding MGP_LPJ_T0049062.1 MGP_LPJ_G0024159.1 mouse_genomes_project 18 32903684 32929576 - MGP_LPJ_P0049062 Brd8 protein_coding protein_coding MGP_LPJ_T0049063.1 MGP_LPJ_G0024159.1 mouse_genomes_project 18 32904684 32929528 - Brd8 protein_coding retained_intron MGP_LPJ_T0049064.1 MGP_LPJ_G0024159.1 mouse_genomes_project 18 32904713 32929576 - MGP_LPJ_P0049064 Brd8 protein_coding protein_coding MGP_LPJ_T0049065.1 MGP_LPJ_G0024159.1 mouse_genomes_project 18 32906029 32929576 - MGP_LPJ_P0049065 Brd8 protein_coding protein_coding MGP_LPJ_T0049066.1 MGP_LPJ_G0024159.1 mouse_genomes_project 18 32915132 32929576 - Brd8 protein_coding retained_intron MGP_LPJ_T0049067.1 MGP_LPJ_G0024159.1 mouse_genomes_project 18 32916109 32929529 - Brd8 protein_coding processed_transcript MGP_LPJ_T0049068.1 MGP_LPJ_G0024159.1 mouse_genomes_project 18 32926894 32929576 - Brd8 protein_coding retained_intron MGP_LPJ_T0100522.1 MGP_LPJ_G0038785.1 mouse_genomes_project 18 78358233 78358365 + Gm26014 snoRNA snoRNA MGP_LPJ_T0048931.1 MGP_LPJ_G0024105.1 mouse_genomes_project 18 20523156 20893107 - MGP_LPJ_P0048931 Nol4 protein_coding protein_coding MGP_LPJ_T0048932.1 MGP_LPJ_G0024105.1 mouse_genomes_project 18 20523166 20713123 - MGP_LPJ_P0048932 Nol4 protein_coding protein_coding MGP_LPJ_T0048933.1 MGP_LPJ_G0024105.1 mouse_genomes_project 18 20523366 20891721 - MGP_LPJ_P0048933 Nol4 protein_coding protein_coding MGP_LPJ_T0048934.1 MGP_LPJ_G0024105.1 mouse_genomes_project 18 20524283 20713123 - MGP_LPJ_P0048934 Nol4 protein_coding protein_coding MGP_LPJ_T0048935.1 MGP_LPJ_G0024105.1 mouse_genomes_project 18 20524509 20893143 - MGP_LPJ_P0048935 Nol4 protein_coding protein_coding MGP_LPJ_T0048936.1 MGP_LPJ_G0024105.1 mouse_genomes_project 18 20680823 20690557 - Nol4 protein_coding processed_transcript MGP_LPJ_T0048937.1 MGP_LPJ_G0024105.1 mouse_genomes_project 18 20771851 20892004 - MGP_LPJ_P0048937 Nol4 protein_coding protein_coding MGP_LPJ_T0048938.1 MGP_LPJ_G0024105.1 mouse_genomes_project 18 20781039 20809058 - Nol4 protein_coding processed_transcript MGP_LPJ_T0017600.1 MGP_LPJ_G0015288.1 mouse_genomes_project 18 85683337 85685099 - D030046N08Rik processed_transcript processed_transcript MGP_LPJ_T0049351.1 MGP_LPJ_G0024283.1 mouse_genomes_project 18 37122319 37167952 + Arhgap26 protein_coding processed_transcript MGP_LPJ_T0049352.1 MGP_LPJ_G0024283.1 mouse_genomes_project 18 37122388 37325274 + Arhgap26 protein_coding processed_transcript MGP_LPJ_T0049353.1 MGP_LPJ_G0024283.1 mouse_genomes_project 18 37148208 37164960 + Arhgap26 protein_coding processed_transcript MGP_LPJ_T0049354.1 MGP_LPJ_G0024283.1 mouse_genomes_project 18 37202749 37312229 + Arhgap26 protein_coding processed_transcript MGP_LPJ_T0049355.1 MGP_LPJ_G0024283.1 mouse_genomes_project 18 37202749 37669948 + MGP_LPJ_P0049355 Arhgap26 protein_coding protein_coding MGP_LPJ_T0049363.1 MGP_LPJ_G0024283.1 mouse_genomes_project 18 37436322 37521600 + Arhgap26 protein_coding processed_transcript MGP_LPJ_T0049364.1 MGP_LPJ_G0024283.1 mouse_genomes_project 18 37437801 37479879 + MGP_LPJ_P0049364 Arhgap26 protein_coding protein_coding MGP_LPJ_T0049365.1 MGP_LPJ_G0024283.1 mouse_genomes_project 18 37504693 37521263 + Arhgap26 protein_coding processed_transcript MGP_LPJ_T0049366.1 MGP_LPJ_G0024283.1 mouse_genomes_project 18 37544972 37659585 + Arhgap26 protein_coding retained_intron MGP_LPJ_T0049367.1 MGP_LPJ_G0024283.1 mouse_genomes_project 18 37544972 37949668 + MGP_LPJ_P0049367 Arhgap26 protein_coding protein_coding MGP_LPJ_T0049368.1 MGP_LPJ_G0024283.1 mouse_genomes_project 18 37545303 37944597 + MGP_LPJ_P0049368 Arhgap26 protein_coding protein_coding MGP_LPJ_T0049369.1 MGP_LPJ_G0024283.1 mouse_genomes_project 18 37658746 37690197 + Arhgap26 protein_coding processed_transcript MGP_LPJ_T0049370.1 MGP_LPJ_G0024283.1 mouse_genomes_project 18 37791354 37945934 + MGP_LPJ_P0049370 Arhgap26 protein_coding protein_coding MGP_LPJ_T0049371.1 MGP_LPJ_G0024283.1 mouse_genomes_project 18 37853416 37949668 + MGP_LPJ_P0049371 Arhgap26 protein_coding protein_coding MGP_LPJ_T0049372.1 MGP_LPJ_G0024283.1 mouse_genomes_project 18 37858272 37874206 + Arhgap26 protein_coding processed_transcript MGP_LPJ_T0049373.1 MGP_LPJ_G0024283.1 mouse_genomes_project 18 37863614 37933510 + MGP_LPJ_P0049373 Arhgap26 protein_coding protein_coding MGP_LPJ_T0049374.1 MGP_LPJ_G0024283.1 mouse_genomes_project 18 37863614 37944564 + MGP_LPJ_P0049374 Arhgap26 protein_coding nonsense_mediated_decay MGP_LPJ_T0049375.1 MGP_LPJ_G0024283.1 mouse_genomes_project 18 37936004 37940490 + Arhgap26 protein_coding processed_transcript MGP_LPJ_T0049224.1 MGP_LPJ_G0024217.1 mouse_genomes_project 18 35429017 35676922 + MGP_LPJ_P0049224 protein_coding protein_coding MGP_LPJ_T0013311.1 MGP_LPJ_G0011402.1 mouse_genomes_project 18 43889619 43890608 - processed_pseudogene processed_pseudogene MGP_LPJ_T0049007.1 MGP_LPJ_G0024135.1 mouse_genomes_project 18 30139514 30169185 + MGP_LPJ_P0049007 Lims2 protein_coding protein_coding MGP_LPJ_T0049009.1 MGP_LPJ_G0024135.1 mouse_genomes_project 18 30163353 30168556 + MGP_LPJ_P0049009 Lims2 protein_coding unknown_likely_coding MGP_LPJ_T0049636.1 MGP_LPJ_G0024392.1 mouse_genomes_project 18 60814080 60840637 + MGP_LPJ_P0049636 Csf1r protein_coding protein_coding MGP_LPJ_T0049637.1 MGP_LPJ_G0024392.1 mouse_genomes_project 18 60814353 60841652 + MGP_LPJ_P0049637 Csf1r protein_coding protein_coding MGP_LPJ_T0049194.1 MGP_LPJ_G0024200.1 mouse_genomes_project 18 35170828 35172495 - MGP_LPJ_P0049194 Cd14 protein_coding protein_coding MGP_LPJ_T0007064.1 MGP_LPJ_G0005808.1 mouse_genomes_project 18 83993524 83994858 - 1700095A13Rik lincRNA lincRNA MGP_LPJ_T0049389.1 MGP_LPJ_G0024291.1 mouse_genomes_project 18 40652321 40666130 - MGP_LPJ_P0049389 Grxcr2 protein_coding protein_coding MGP_LPJ_T0013308.1 MGP_LPJ_G0011399.1 mouse_genomes_project 18 37307451 37308338 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003804.1 MGP_LPJ_G0003422.1 mouse_genomes_project 18 3117872 3131325 + Gm17036 antisense antisense MGP_LPJ_T0100514.1 MGP_LPJ_G0038777.1 mouse_genomes_project 18 58073963 58074094 - Gm23270 snoRNA snoRNA MGP_LPJ_T0099258.1 MGP_LPJ_G0037521.1 mouse_genomes_project 18 36800911 36801014 + Gm23205 snRNA snRNA MGP_LPJ_T0050107.1 MGP_LPJ_G0024536.1 mouse_genomes_project 18 90518543 91021132 - MGP_LPJ_P0050107 Dok6 protein_coding protein_coding MGP_LPJ_T0050108.1 MGP_LPJ_G0024536.1 mouse_genomes_project 18 90687004 90799954 - Dok6 protein_coding retained_intron MGP_LPJ_T0049567.1 MGP_LPJ_G0024366.1 mouse_genomes_project 18 56743155 56785342 + MGP_LPJ_P0049567 Prrc1 protein_coding protein_coding MGP_LPJ_T0049402.1 MGP_LPJ_G0024299.1 mouse_genomes_project 18 41288254 41289887 - MGP_LPJ_P0049402 Gpr151 protein_coding protein_coding MGP_LPJ_T0049515.1 MGP_LPJ_G0024344.1 mouse_genomes_project 18 51483745 51485196 + MGP_LPJ_P0049515 Ftmt protein_coding protein_coding MGP_LPJ_T0048975.1 MGP_LPJ_G0024121.1 mouse_genomes_project 18 23066245 23111863 - MGP_LPJ_P0048975 Tpgs2 protein_coding protein_coding MGP_LPJ_T0048976.1 MGP_LPJ_G0024121.1 mouse_genomes_project 18 23076156 23112176 - MGP_LPJ_P0048976 Tpgs2 protein_coding protein_coding MGP_LPJ_T0013328.1 MGP_LPJ_G0011419.1 mouse_genomes_project 18 85617840 85621958 - processed_pseudogene processed_pseudogene MGP_LPJ_T0049125.1 MGP_LPJ_G0024178.1 mouse_genomes_project 18 33984501 33997134 - MGP_LPJ_P0049125 Slc23a1 protein_coding protein_coding MGP_LPJ_T0049126.1 MGP_LPJ_G0024178.1 mouse_genomes_project 18 33989215 33997086 - MGP_LPJ_P0049126 Slc23a1 protein_coding nonsense_mediated_decay MGP_LPJ_T0049127.1 MGP_LPJ_G0024178.1 mouse_genomes_project 18 33989911 33992448 - Slc23a1 protein_coding processed_transcript MGP_LPJ_T0049128.1 MGP_LPJ_G0024178.1 mouse_genomes_project 18 33992665 33997126 - Slc23a1 protein_coding processed_transcript MGP_LPJ_T0013330.1 MGP_LPJ_G0011421.1 mouse_genomes_project 18 90766903 90767362 + processed_pseudogene processed_pseudogene MGP_LPJ_T0049609.1 MGP_LPJ_G0024383.1 mouse_genomes_project 18 60363891 60402551 - MGP_LPJ_P0049609 Ndst1 protein_coding unknown_likely_coding MGP_LPJ_T0049094.1 MGP_LPJ_G0024171.1 mouse_genomes_project 18 33467106 33607988 + MGP_LPJ_P0049094 Ctnna1 protein_coding protein_coding MGP_LPJ_T0013285.1 MGP_LPJ_G0011376.1 mouse_genomes_project 18 6748692 6749689 + processed_pseudogene processed_pseudogene MGP_LPJ_T0049225.1 MGP_LPJ_G0024218.1 mouse_genomes_project 18 35432976 35676922 + MGP_LPJ_P0049225 protein_coding protein_coding MGP_LPJ_T0001043.1 MGP_LPJ_G0000968.1 mouse_genomes_project 18 81086779 81088300 - TEC TEC MGP_LPJ_T0099265.1 MGP_LPJ_G0037528.1 mouse_genomes_project 18 54456007 54456087 + Gm22597 snRNA snRNA MGP_LPJ_T0049333.1 MGP_LPJ_G0024276.1 mouse_genomes_project 18 36686276 36712367 - MGP_LPJ_P0049333 Pcdh1 protein_coding protein_coding MGP_LPJ_T0049334.1 MGP_LPJ_G0024276.1 mouse_genomes_project 18 36689230 36703495 - MGP_LPJ_P0049334 Pcdh1 protein_coding protein_coding MGP_LPJ_T0049335.1 MGP_LPJ_G0024276.1 mouse_genomes_project 18 36697021 36710081 - MGP_LPJ_P0049335 Pcdh1 protein_coding protein_coding MGP_LPJ_T0049336.1 MGP_LPJ_G0024276.1 mouse_genomes_project 18 36697021 36712291 - MGP_LPJ_P0049336 Pcdh1 protein_coding protein_coding MGP_LPJ_T0049337.1 MGP_LPJ_G0024276.1 mouse_genomes_project 18 36703775 36710873 - MGP_LPJ_P0049337 Pcdh1 protein_coding protein_coding MGP_LPJ_T0049338.1 MGP_LPJ_G0024276.1 mouse_genomes_project 18 36703775 36704172 - MGP_LPJ_P0049338 Pcdh1 protein_coding protein_coding MGP_LPJ_T0010271.1 MGP_LPJ_G0008389.1 mouse_genomes_project 18 59108859 59108966 + Mir6355 miRNA miRNA MGP_LPJ_T0007044.1 MGP_LPJ_G0005793.1 mouse_genomes_project 18 54246477 54348228 + Gm4221 lincRNA lincRNA MGP_LPJ_T0007045.1 MGP_LPJ_G0005793.1 mouse_genomes_project 18 54325833 54350305 + Gm4221 lincRNA lincRNA MGP_LPJ_T0100507.1 MGP_LPJ_G0038770.1 mouse_genomes_project 18 33920838 33920979 + Mir1949 snoRNA snoRNA MGP_LPJ_T0049248.1 MGP_LPJ_G0024234.1 mouse_genomes_project 18 35875645 35878700 + MGP_LPJ_P0049248 Pcdhb9 protein_coding protein_coding MGP_LPJ_T0010274.1 MGP_LPJ_G0008392.1 mouse_genomes_project 18 60651861 60651921 + Mir7220 miRNA miRNA MGP_LPJ_T0013283.1 MGP_LPJ_G0011374.1 mouse_genomes_project 18 4505751 4506159 + processed_pseudogene processed_pseudogene MGP_LPJ_T0050109.1 MGP_LPJ_G0024537.1 mouse_genomes_project 18 91808735 91849240 + MGP_LPJ_P0050109 Tmx3 protein_coding protein_coding MGP_LPJ_T0007058.1 MGP_LPJ_G0005803.1 mouse_genomes_project 18 76373575 76374844 + 1700034B16Rik lincRNA lincRNA MGP_LPJ_T0049241.1 MGP_LPJ_G0024229.1 mouse_genomes_project 18 35792831 35796547 + MGP_LPJ_P0049241 Pcdhb4 protein_coding protein_coding MGP_LPJ_T0049034.1 MGP_LPJ_G0024150.1 mouse_genomes_project 18 32049223 32267629 - MGP_LPJ_P0049034 Epb41l4a protein_coding protein_coding MGP_LPJ_T0049182.1 MGP_LPJ_G0024196.1 mouse_genomes_project 18 35101367 35103225 + MGP_LPJ_P0049182 Eif4ebp3 protein_coding protein_coding MGP_LPJ_T0017576.1 MGP_LPJ_G0015281.1 mouse_genomes_project 18 49079033 49089921 - C030005K06Rik processed_transcript processed_transcript MGP_LPJ_T0017577.1 MGP_LPJ_G0015281.1 mouse_genomes_project 18 49082468 49090105 - C030005K06Rik processed_transcript processed_transcript MGP_LPJ_T0017578.1 MGP_LPJ_G0015281.1 mouse_genomes_project 18 49088538 49090105 - C030005K06Rik processed_transcript processed_transcript MGP_LPJ_T0017579.1 MGP_LPJ_G0015281.1 mouse_genomes_project 18 49088558 49089866 - C030005K06Rik processed_transcript processed_transcript MGP_LPJ_T0049426.1 MGP_LPJ_G0024310.1 mouse_genomes_project 18 42868912 42873049 + MGP_LPJ_P0049426 Spink12 protein_coding protein_coding MGP_LPJ_T0049289.1 MGP_LPJ_G0024266.1 mouse_genomes_project 18 36233613 36321813 + MGP_LPJ_P0049289 Pcdhga11 protein_coding protein_coding MGP_LPJ_T0049857.1 MGP_LPJ_G0024457.1 mouse_genomes_project 18 70240353 70261105 + Ccdc68 protein_coding processed_transcript MGP_LPJ_T0049858.1 MGP_LPJ_G0024457.1 mouse_genomes_project 18 70240393 70287237 + MGP_LPJ_P0049858 Ccdc68 protein_coding protein_coding MGP_LPJ_T0049859.1 MGP_LPJ_G0024457.1 mouse_genomes_project 18 70240497 70254668 + Ccdc68 protein_coding processed_transcript MGP_LPJ_T0049860.1 MGP_LPJ_G0024457.1 mouse_genomes_project 18 70240503 70287237 + MGP_LPJ_P0049860 Ccdc68 protein_coding protein_coding MGP_LPJ_T0010249.1 MGP_LPJ_G0008367.1 mouse_genomes_project 18 5664009 5664113 - Gm26119 miRNA miRNA MGP_LPJ_T0049417.1 MGP_LPJ_G0024304.1 mouse_genomes_project 18 42474422 42485736 - MGP_LPJ_P0049417 Spink1 protein_coding protein_coding MGP_LPJ_T0049531.1 MGP_LPJ_G0024352.1 mouse_genomes_project 18 52445501 52589262 + MGP_LPJ_P0049531 Snx24 protein_coding protein_coding MGP_LPJ_T0049532.1 MGP_LPJ_G0024352.1 mouse_genomes_project 18 52445608 52589262 + MGP_LPJ_P0049532 Snx24 protein_coding protein_coding MGP_LPJ_T0100523.1 MGP_LPJ_G0038786.1 mouse_genomes_project 18 80301841 80301962 - Gm25824 snoRNA snoRNA MGP_LPJ_T0050044.1 MGP_LPJ_G0024519.1 mouse_genomes_project 18 83320774 83411237 + MGP_LPJ_P0050044 Mbp protein_coding protein_coding MGP_LPJ_T0050045.1 MGP_LPJ_G0024519.1 mouse_genomes_project 18 83320776 83361888 + MGP_LPJ_P0050045 Mbp protein_coding protein_coding MGP_LPJ_T0050046.1 MGP_LPJ_G0024519.1 mouse_genomes_project 18 83320790 83438306 + MGP_LPJ_P0050046 Mbp protein_coding protein_coding MGP_LPJ_T0050047.1 MGP_LPJ_G0024519.1 mouse_genomes_project 18 83320968 83438305 + MGP_LPJ_P0050047 Mbp protein_coding protein_coding MGP_LPJ_T0050048.1 MGP_LPJ_G0024519.1 mouse_genomes_project 18 83320998 83436886 + MGP_LPJ_P0050048 Mbp protein_coding nonsense_mediated_decay MGP_LPJ_T0050049.1 MGP_LPJ_G0024519.1 mouse_genomes_project 18 83406995 83438306 + MGP_LPJ_P0050049 Mbp protein_coding protein_coding MGP_LPJ_T0050050.1 MGP_LPJ_G0024519.1 mouse_genomes_project 18 83406995 83438306 + MGP_LPJ_P0050050 Mbp protein_coding protein_coding MGP_LPJ_T0050051.1 MGP_LPJ_G0024519.1 mouse_genomes_project 18 83407002 83438296 + MGP_LPJ_P0050051 Mbp protein_coding protein_coding MGP_LPJ_T0050052.1 MGP_LPJ_G0024519.1 mouse_genomes_project 18 83407040 83438306 + MGP_LPJ_P0050052 Mbp protein_coding protein_coding MGP_LPJ_T0050053.1 MGP_LPJ_G0024519.1 mouse_genomes_project 18 83407062 83436825 + MGP_LPJ_P0050053 Mbp protein_coding protein_coding MGP_LPJ_T0050054.1 MGP_LPJ_G0024519.1 mouse_genomes_project 18 83407078 83438306 + MGP_LPJ_P0050054 Mbp protein_coding protein_coding MGP_LPJ_T0050055.1 MGP_LPJ_G0024519.1 mouse_genomes_project 18 83407115 83438295 + MGP_LPJ_P0050055 Mbp protein_coding protein_coding MGP_LPJ_T0050056.1 MGP_LPJ_G0024519.1 mouse_genomes_project 18 83415836 83436956 + Mbp protein_coding processed_transcript MGP_LPJ_T0049001.1 MGP_LPJ_G0024130.1 mouse_genomes_project 18 29958110 29982690 + MGP_LPJ_P0049001 Ammecr1l protein_coding protein_coding MGP_LPJ_T0098212.1 MGP_LPJ_G0036493.1 mouse_genomes_project 18 57672498 57672602 - Gm25660 rRNA rRNA MGP_LPJ_T0013305.1 MGP_LPJ_G0011396.1 mouse_genomes_project 18 35909609 35910480 + processed_pseudogene processed_pseudogene MGP_LPJ_T0050097.1 MGP_LPJ_G0024533.1 mouse_genomes_project 18 89878767 89967142 - protein_coding processed_transcript MGP_LPJ_T0050098.1 MGP_LPJ_G0024533.1 mouse_genomes_project 18 89882752 90106877 - protein_coding processed_transcript MGP_LPJ_T0050099.1 MGP_LPJ_G0024533.1 mouse_genomes_project 18 90071826 90106860 - MGP_LPJ_P0050099 protein_coding protein_coding MGP_LPJ_T0050100.1 MGP_LPJ_G0024533.1 mouse_genomes_project 18 90074883 90106754 - MGP_LPJ_P0050100 protein_coding protein_coding MGP_LPJ_T0050101.1 MGP_LPJ_G0024533.1 mouse_genomes_project 18 90075204 90106890 - MGP_LPJ_P0050101 protein_coding protein_coding MGP_LPJ_T0050102.1 MGP_LPJ_G0024533.1 mouse_genomes_project 18 90077064 90099788 - MGP_LPJ_P0050102 protein_coding protein_coding MGP_LPJ_T0050103.1 MGP_LPJ_G0024533.1 mouse_genomes_project 18 90079283 90141373 - MGP_LPJ_P0050103 protein_coding protein_coding MGP_LPJ_T0049221.1 MGP_LPJ_G0024214.1 mouse_genomes_project 18 35415127 36320140 + MGP_LPJ_P0049221 Gm42416 protein_coding protein_coding MGP_LPJ_T0048925.1 MGP_LPJ_G0024103.1 mouse_genomes_project 18 19620771 20006974 - MGP_LPJ_P0048925 Ccdc178 protein_coding protein_coding MGP_LPJ_T0048926.1 MGP_LPJ_G0024103.1 mouse_genomes_project 18 19621172 20002065 - MGP_LPJ_P0048926 Ccdc178 protein_coding protein_coding MGP_LPJ_T0049764.1 MGP_LPJ_G0024436.1 mouse_genomes_project 18 66946029 66948791 - MGP_LPJ_P0049764 Mc4r protein_coding protein_coding MGP_LPJ_T0013312.1 MGP_LPJ_G0011403.1 mouse_genomes_project 18 45336903 45337479 - processed_pseudogene processed_pseudogene MGP_LPJ_T0049763.1 MGP_LPJ_G0024435.1 mouse_genomes_project 18 66535933 66542880 + MGP_LPJ_P0049763 Pmaip1 protein_coding protein_coding MGP_LPJ_T0049997.1 MGP_LPJ_G0024502.1 mouse_genomes_project 18 78841609 78906965 - MGP_LPJ_P0049997 Slc14a2 protein_coding protein_coding MGP_LPJ_T0049998.1 MGP_LPJ_G0024502.1 mouse_genomes_project 18 78880679 78904311 - MGP_LPJ_P0049998 Slc14a2 protein_coding protein_coding MGP_LPJ_T0048952.1 MGP_LPJ_G0024110.1 mouse_genomes_project 18 21876746 21893074 + MGP_LPJ_P0048952 Zfp35 protein_coding protein_coding MGP_LPJ_T0049246.1 MGP_LPJ_G0024233.1 mouse_genomes_project 18 35845081 35846566 + MGP_LPJ_P0049246 Pcdhb8 protein_coding protein_coding MGP_LPJ_T0049247.1 MGP_LPJ_G0024233.1 mouse_genomes_project 18 35845231 35848561 + MGP_LPJ_P0049247 Pcdhb8 protein_coding protein_coding MGP_LPJ_T0017562.1 MGP_LPJ_G0015276.1 mouse_genomes_project 18 35649113 35667789 - Gm10544 processed_transcript antisense MGP_LPJ_T0017563.1 MGP_LPJ_G0015276.1 mouse_genomes_project 18 35664862 35667773 - Gm10544 processed_transcript antisense MGP_LPJ_T0017564.1 MGP_LPJ_G0015276.1 mouse_genomes_project 18 35666023 35667781 - Gm10544 processed_transcript retained_intron MGP_LPJ_T0050004.1 MGP_LPJ_G0024508.1 mouse_genomes_project 18 80967654 80976071 - MGP_LPJ_P0050004 Rbfa protein_coding protein_coding MGP_LPJ_T0100499.1 MGP_LPJ_G0038762.1 mouse_genomes_project 18 26390894 26391026 + Gm24246 snoRNA snoRNA MGP_LPJ_T0099282.1 MGP_LPJ_G0037545.1 mouse_genomes_project 18 87390538 87390645 + Gm25453 snRNA snRNA MGP_LPJ_T0100526.1 MGP_LPJ_G0038789.1 mouse_genomes_project 18 91792610 91792739 + Gm25418 snoRNA snoRNA MGP_LPJ_T0011468.1 MGP_LPJ_G0009586.1 mouse_genomes_project 18 30512921 30513229 + Gm22325 misc_RNA misc_RNA MGP_LPJ_T0048996.1 MGP_LPJ_G0024126.1 mouse_genomes_project 18 29618403 29627994 - MGP_LPJ_P0048996 Syt4 protein_coding protein_coding MGP_LPJ_T0049288.1 MGP_LPJ_G0024265.1 mouse_genomes_project 18 36229477 36321813 + MGP_LPJ_P0049288 Pcdhgb7 protein_coding protein_coding MGP_LPJ_T0048908.1 MGP_LPJ_G0024092.1 mouse_genomes_project 18 18143799 18185374 + MGP_LPJ_P0048908 Dsg4 protein_coding protein_coding MGP_LPJ_T0011476.1 MGP_LPJ_G0009594.1 mouse_genomes_project 18 54885536 54885821 - Gm24514 misc_RNA misc_RNA MGP_LPJ_T0007028.1 MGP_LPJ_G0005781.1 mouse_genomes_project 18 31153916 31179754 - 2310026I22Rik lincRNA lincRNA MGP_LPJ_T0003810.1 MGP_LPJ_G0003427.1 mouse_genomes_project 18 14215938 14216885 + Gm15485 antisense antisense MGP_LPJ_T0017565.1 MGP_LPJ_G0015277.1 mouse_genomes_project 18 36224419 36233837 - Gm26672 processed_transcript antisense MGP_LPJ_T0017566.1 MGP_LPJ_G0015277.1 mouse_genomes_project 18 36230005 36245320 - Gm26672 processed_transcript antisense MGP_LPJ_T0017567.1 MGP_LPJ_G0015277.1 mouse_genomes_project 18 36230147 36246021 - Gm26672 processed_transcript antisense MGP_LPJ_T0017568.1 MGP_LPJ_G0015277.1 mouse_genomes_project 18 36232700 36234231 - Gm26672 processed_transcript retained_intron MGP_LPJ_T0100506.1 MGP_LPJ_G0038769.1 mouse_genomes_project 18 33274938 33275008 - Gm26109 snoRNA snoRNA MGP_LPJ_T0049494.1 MGP_LPJ_G0024338.1 mouse_genomes_project 18 49012310 49130949 + MGP_LPJ_P0049494 Tnfaip8 protein_coding protein_coding MGP_LPJ_T0049495.1 MGP_LPJ_G0024338.1 mouse_genomes_project 18 49012374 49087560 + Tnfaip8 protein_coding processed_transcript MGP_LPJ_T0049496.1 MGP_LPJ_G0024338.1 mouse_genomes_project 18 49012412 49133810 + MGP_LPJ_P0049496 Tnfaip8 protein_coding protein_coding MGP_LPJ_T0049497.1 MGP_LPJ_G0024338.1 mouse_genomes_project 18 49012418 49147567 + Tnfaip8 protein_coding processed_transcript MGP_LPJ_T0049498.1 MGP_LPJ_G0024338.1 mouse_genomes_project 18 49056083 49130742 + MGP_LPJ_P0049498 Tnfaip8 protein_coding protein_coding MGP_LPJ_T0049499.1 MGP_LPJ_G0024338.1 mouse_genomes_project 18 49067589 49130799 + MGP_LPJ_P0049499 Tnfaip8 protein_coding protein_coding MGP_LPJ_T0049500.1 MGP_LPJ_G0024338.1 mouse_genomes_project 18 49067599 49082716 + Tnfaip8 protein_coding processed_transcript MGP_LPJ_T0049501.1 MGP_LPJ_G0024338.1 mouse_genomes_project 18 49067600 49130634 + MGP_LPJ_P0049501 Tnfaip8 protein_coding protein_coding MGP_LPJ_T0049502.1 MGP_LPJ_G0024338.1 mouse_genomes_project 18 49083028 49083397 + MGP_LPJ_P0049502 Tnfaip8 protein_coding protein_coding MGP_LPJ_T0049503.1 MGP_LPJ_G0024338.1 mouse_genomes_project 18 49087949 49089676 + Tnfaip8 protein_coding retained_intron MGP_LPJ_T0049504.1 MGP_LPJ_G0024338.1 mouse_genomes_project 18 49087957 49130305 + MGP_LPJ_P0049504 Tnfaip8 protein_coding protein_coding MGP_LPJ_T0049505.1 MGP_LPJ_G0024338.1 mouse_genomes_project 18 49087960 49130418 + MGP_LPJ_P0049505 Tnfaip8 protein_coding protein_coding MGP_LPJ_T0049506.1 MGP_LPJ_G0024338.1 mouse_genomes_project 18 49089542 49131730 + MGP_LPJ_P0049506 Tnfaip8 protein_coding protein_coding MGP_LPJ_T0007046.1 MGP_LPJ_G0005794.1 mouse_genomes_project 18 57649735 57661972 + Gm26507 lincRNA lincRNA MGP_LPJ_T0049183.1 MGP_LPJ_G0024197.1 mouse_genomes_project 18 35103984 35110192 - MGP_LPJ_P0049183 Sra1 protein_coding protein_coding MGP_LPJ_T0049184.1 MGP_LPJ_G0024197.1 mouse_genomes_project 18 35104549 35107594 - MGP_LPJ_P0049184 Sra1 protein_coding nonsense_mediated_decay MGP_LPJ_T0049185.1 MGP_LPJ_G0024197.1 mouse_genomes_project 18 35104575 35107614 - Sra1 protein_coding retained_intron MGP_LPJ_T0049186.1 MGP_LPJ_G0024197.1 mouse_genomes_project 18 35104732 35107593 - MGP_LPJ_P0049186 Sra1 protein_coding protein_coding MGP_LPJ_T0049187.1 MGP_LPJ_G0024197.1 mouse_genomes_project 18 35107129 35107584 - Sra1 protein_coding retained_intron MGP_LPJ_T0049188.1 MGP_LPJ_G0024197.1 mouse_genomes_project 18 35110155 35116957 - MGP_LPJ_P0049188 Sra1 protein_coding protein_coding MGP_LPJ_T0049259.1 MGP_LPJ_G0024245.1 mouse_genomes_project 18 35986515 35990073 + MGP_LPJ_P0049259 Pcdhb20 protein_coding protein_coding MGP_LPJ_T0049923.1 MGP_LPJ_G0024479.1 mouse_genomes_project 18 75527792 75537665 + MGP_LPJ_P0049923 Rpl17 protein_coding protein_coding MGP_LPJ_T0049924.1 MGP_LPJ_G0024479.1 mouse_genomes_project 18 75528509 75537528 + MGP_LPJ_P0049924 Rpl17 protein_coding unknown_likely_coding MGP_LPJ_T0049281.1 MGP_LPJ_G0024260.1 mouse_genomes_project 18 36203104 36321813 + MGP_LPJ_P0049281 Pcdhga8 protein_coding protein_coding MGP_LPJ_T0049682.1 MGP_LPJ_G0024413.1 mouse_genomes_project 18 62485049 62485870 + MGP_LPJ_P0049682 Gm17732 protein_coding protein_coding MGP_LPJ_T0049345.1 MGP_LPJ_G0024280.1 mouse_genomes_project 18 36834144 36837490 - protein_coding processed_transcript MGP_LPJ_T0049346.1 MGP_LPJ_G0024280.1 mouse_genomes_project 18 36834334 36844366 - MGP_LPJ_P0049346 protein_coding unknown_likely_coding MGP_LPJ_T0049347.1 MGP_LPJ_G0024280.1 mouse_genomes_project 18 36838516 36840495 - protein_coding retained_intron MGP_LPJ_T0049348.1 MGP_LPJ_G0024280.1 mouse_genomes_project 18 36838608 36844326 - MGP_LPJ_P0049348 protein_coding protein_coding MGP_LPJ_T0049576.1 MGP_LPJ_G0024372.1 mouse_genomes_project 18 58118692 58140213 + MGP_LPJ_P0049576 Isoc1 protein_coding protein_coding MGP_LPJ_T0049514.1 MGP_LPJ_G0024343.1 mouse_genomes_project 18 51013060 51013667 - MGP_LPJ_P0049514 Gm4950 protein_coding protein_coding MGP_LPJ_T0049933.1 MGP_LPJ_G0024484.1 mouse_genomes_project 18 76419750 76773994 + MGP_LPJ_P0049933 Zbtb7c protein_coding protein_coding MGP_LPJ_T0049934.1 MGP_LPJ_G0024484.1 mouse_genomes_project 18 76676140 76771875 + MGP_LPJ_P0049934 Zbtb7c protein_coding protein_coding MGP_LPJ_T0007024.1 MGP_LPJ_G0005777.1 mouse_genomes_project 18 30061678 30065181 - Gm26823 lincRNA lincRNA MGP_LPJ_T0049670.1 MGP_LPJ_G0024404.1 mouse_genomes_project 18 61576188 61694709 - MGP_LPJ_P0049670 Ablim3 protein_coding protein_coding MGP_LPJ_T0049671.1 MGP_LPJ_G0024404.1 mouse_genomes_project 18 61576188 61694737 - MGP_LPJ_P0049671 Ablim3 protein_coding protein_coding MGP_LPJ_T0049035.1 MGP_LPJ_G0024151.1 mouse_genomes_project 18 32501653 32597865 + MGP_LPJ_P0049035 Apc protein_coding protein_coding MGP_LPJ_T0049036.1 MGP_LPJ_G0024151.1 mouse_genomes_project 18 32501713 32602967 + MGP_LPJ_P0049036 Apc protein_coding protein_coding MGP_LPJ_T0049037.1 MGP_LPJ_G0024151.1 mouse_genomes_project 18 32501713 32606547 + MGP_LPJ_P0049037 Apc protein_coding protein_coding MGP_LPJ_T0049038.1 MGP_LPJ_G0024151.1 mouse_genomes_project 18 32501742 32584602 + Apc protein_coding retained_intron MGP_LPJ_T0049039.1 MGP_LPJ_G0024151.1 mouse_genomes_project 18 32501981 32561438 + MGP_LPJ_P0049039 Apc protein_coding nonsense_mediated_decay MGP_LPJ_T0049040.1 MGP_LPJ_G0024151.1 mouse_genomes_project 18 32531323 32547319 + Apc protein_coding retained_intron MGP_LPJ_T0049041.1 MGP_LPJ_G0024151.1 mouse_genomes_project 18 32531327 32574275 + MGP_LPJ_P0049041 Apc protein_coding protein_coding MGP_LPJ_T0049042.1 MGP_LPJ_G0024151.1 mouse_genomes_project 18 32584365 32598685 + MGP_LPJ_P0049042 Apc protein_coding nonsense_mediated_decay MGP_LPJ_T0049043.1 MGP_LPJ_G0024151.1 mouse_genomes_project 18 32585660 32595096 + Apc protein_coding processed_transcript MGP_LPJ_T0048918.1 MGP_LPJ_G0024098.1 mouse_genomes_project 18 18729967 18753526 + MGP_LPJ_P0048918 Rnf125 protein_coding protein_coding MGP_LPJ_T0050064.1 MGP_LPJ_G0024521.1 mouse_genomes_project 18 83778168 83883737 + MGP_LPJ_P0050064 Zfp516 protein_coding protein_coding MGP_LPJ_T0050065.1 MGP_LPJ_G0024521.1 mouse_genomes_project 18 83833339 83883737 + MGP_LPJ_P0050065 Zfp516 protein_coding protein_coding MGP_LPJ_T0049880.1 MGP_LPJ_G0024464.1 mouse_genomes_project 18 71610035 72775503 - MGP_LPJ_P0049880 Dcc protein_coding protein_coding MGP_LPJ_T0049881.1 MGP_LPJ_G0024464.1 mouse_genomes_project 18 71610287 72775451 - MGP_LPJ_P0049881 Dcc protein_coding protein_coding MGP_LPJ_T0049882.1 MGP_LPJ_G0024464.1 mouse_genomes_project 18 72347640 72775475 - Dcc protein_coding retained_intron MGP_LPJ_T0003828.1 MGP_LPJ_G0003442.1 mouse_genomes_project 18 37812027 37869520 - Gm15336 antisense antisense MGP_LPJ_T0049783.1 MGP_LPJ_G0024449.1 mouse_genomes_project 18 67980828 68076307 + MGP_LPJ_P0049783 Cep192 protein_coding protein_coding MGP_LPJ_T0049784.1 MGP_LPJ_G0024449.1 mouse_genomes_project 18 67983504 68076016 + MGP_LPJ_P0049784 Cep192 protein_coding unknown_likely_coding MGP_LPJ_T0003812.1 MGP_LPJ_G0003429.1 mouse_genomes_project 18 19445292 19455858 + antisense antisense MGP_LPJ_T0003813.1 MGP_LPJ_G0003429.1 mouse_genomes_project 18 19445409 19455851 + antisense antisense MGP_LPJ_T0003814.1 MGP_LPJ_G0003429.1 mouse_genomes_project 18 19446404 19455867 + antisense antisense MGP_LPJ_T0003815.1 MGP_LPJ_G0003429.1 mouse_genomes_project 18 19446407 19456815 + antisense antisense MGP_LPJ_T0007051.1 MGP_LPJ_G0005797.1 mouse_genomes_project 18 62579905 62586392 - 2700046A07Rik lincRNA lincRNA MGP_LPJ_T0007052.1 MGP_LPJ_G0005797.1 mouse_genomes_project 18 62584867 62586424 - 2700046A07Rik lincRNA lincRNA MGP_LPJ_T0001040.1 MGP_LPJ_G0000965.1 mouse_genomes_project 18 54777550 54778543 - TEC TEC MGP_LPJ_T0049287.1 MGP_LPJ_G0024264.1 mouse_genomes_project 18 36224853 36321813 + MGP_LPJ_P0049287 Pcdhga10 protein_coding protein_coding MGP_LPJ_T0011470.1 MGP_LPJ_G0009588.1 mouse_genomes_project 18 37114944 37115015 + Gm27369 misc_RNA misc_RNA MGP_LPJ_T0049456.1 MGP_LPJ_G0024322.1 mouse_genomes_project 18 45081243 45133612 - MGP_LPJ_P0049456 Pggt1b protein_coding protein_coding MGP_LPJ_T0003836.1 MGP_LPJ_G0003448.1 mouse_genomes_project 18 61449263 61450622 - Gm38165 antisense antisense MGP_LPJ_T0049512.1 MGP_LPJ_G0024341.1 mouse_genomes_project 18 49658541 49659585 - MGP_LPJ_P0049512 Hdhd1a protein_coding protein_coding MGP_LPJ_T0011480.1 MGP_LPJ_G0009598.1 mouse_genomes_project 18 70074014 70074124 - Gm22508 misc_RNA misc_RNA MGP_LPJ_T0049720.1 MGP_LPJ_G0024426.1 mouse_genomes_project 18 65419889 65471029 + MGP_LPJ_P0049720 Malt1 protein_coding protein_coding MGP_LPJ_T0049721.1 MGP_LPJ_G0024426.1 mouse_genomes_project 18 65420039 65468630 + MGP_LPJ_P0049721 Malt1 protein_coding unknown_likely_coding MGP_LPJ_T0010288.1 MGP_LPJ_G0008406.1 mouse_genomes_project 18 76798520 76798621 + Mir6358 miRNA miRNA MGP_LPJ_T0013300.1 MGP_LPJ_G0011391.1 mouse_genomes_project 18 34154587 34154938 + processed_pseudogene processed_pseudogene MGP_LPJ_T0049585.1 MGP_LPJ_G0024375.1 mouse_genomes_project 18 58673509 58931922 + MGP_LPJ_P0049585 Chsy3 protein_coding protein_coding MGP_LPJ_T0049130.1 MGP_LPJ_G0024180.1 mouse_genomes_project 18 34025818 34030706 - MGP_LPJ_P0049130 Prob1 protein_coding protein_coding MGP_LPJ_T0049131.1 MGP_LPJ_G0024180.1 mouse_genomes_project 18 34025822 34027474 - Prob1 protein_coding processed_transcript MGP_LPJ_T0049132.1 MGP_LPJ_G0024180.1 mouse_genomes_project 18 34027634 34030655 - MGP_LPJ_P0049132 Prob1 protein_coding protein_coding MGP_LPJ_T0048832.1 MGP_LPJ_G0024065.1 mouse_genomes_project 18 8840984 8957385 + MGP_LPJ_P0048832 Rbbp8 protein_coding protein_coding MGP_LPJ_T0048833.1 MGP_LPJ_G0024065.1 mouse_genomes_project 18 8862774 8957385 + MGP_LPJ_P0048833 Rbbp8 protein_coding protein_coding MGP_LPJ_T0049332.1 MGP_LPJ_G0024275.1 mouse_genomes_project 18 36458306 36485096 - MGP_LPJ_P0049332 Arap3 protein_coding unknown_likely_coding MGP_LPJ_T0049589.1 MGP_LPJ_G0024379.1 mouse_genomes_project 18 60205188 60232552 + MGP_LPJ_P0049589 Dctn4 protein_coding protein_coding MGP_LPJ_T0049590.1 MGP_LPJ_G0024379.1 mouse_genomes_project 18 60205198 60232555 + MGP_LPJ_P0049590 Dctn4 protein_coding unknown_likely_coding MGP_LPJ_T0049395.1 MGP_LPJ_G0024294.1 mouse_genomes_project 18 40867933 40884246 - MGP_LPJ_P0049395 Plac8l1 protein_coding protein_coding MGP_LPJ_T0049759.1 MGP_LPJ_G0024434.1 mouse_genomes_project 18 66089306 66350517 - Ccbe1 protein_coding processed_transcript MGP_LPJ_T0049760.1 MGP_LPJ_G0024434.1 mouse_genomes_project 18 66104589 66350859 - MGP_LPJ_P0049760 Ccbe1 protein_coding nonsense_mediated_decay MGP_LPJ_T0049761.1 MGP_LPJ_G0024434.1 mouse_genomes_project 18 66108694 66350909 - MGP_LPJ_P0049761 Ccbe1 protein_coding protein_coding MGP_LPJ_T0049762.1 MGP_LPJ_G0024434.1 mouse_genomes_project 18 66327351 66362513 - Ccbe1 protein_coding processed_transcript MGP_LPJ_T0007043.1 MGP_LPJ_G0005792.1 mouse_genomes_project 18 54237603 54243835 + Gm26742 lincRNA lincRNA MGP_LPJ_T0013315.1 MGP_LPJ_G0011406.1 mouse_genomes_project 18 51621924 51622822 - processed_pseudogene processed_pseudogene MGP_LPJ_T0049464.1 MGP_LPJ_G0024327.1 mouse_genomes_project 18 45480720 45494269 + MGP_LPJ_P0049464 Eif1a protein_coding protein_coding MGP_LPJ_T0049465.1 MGP_LPJ_G0024327.1 mouse_genomes_project 18 45480724 45491885 + MGP_LPJ_P0049465 Eif1a protein_coding protein_coding MGP_LPJ_T0011473.1 MGP_LPJ_G0009591.1 mouse_genomes_project 18 39583522 39583796 + Gm22483 misc_RNA misc_RNA MGP_LPJ_T0048974.1 MGP_LPJ_G0024120.1 mouse_genomes_project 18 22632568 23073620 + MGP_LPJ_P0048974 Fhod3 protein_coding protein_coding MGP_LPJ_T0007017.1 MGP_LPJ_G0005773.1 mouse_genomes_project 18 14307190 14313568 + Gm15328 lincRNA lincRNA MGP_LPJ_T0049534.1 MGP_LPJ_G0024354.1 mouse_genomes_project 18 52666143 52772277 + MGP_LPJ_P0049534 Prdm6 protein_coding protein_coding MGP_LPJ_T0049535.1 MGP_LPJ_G0024354.1 mouse_genomes_project 18 52667303 52773065 + MGP_LPJ_P0049535 Prdm6 protein_coding protein_coding MGP_LPJ_T0049536.1 MGP_LPJ_G0024354.1 mouse_genomes_project 18 52754839 52773065 + MGP_LPJ_P0049536 Prdm6 protein_coding protein_coding MGP_LPJ_T0049773.1 MGP_LPJ_G0024444.1 mouse_genomes_project 18 67642747 67775895 - MGP_LPJ_P0049773 Spire1 protein_coding protein_coding MGP_LPJ_T0049774.1 MGP_LPJ_G0024444.1 mouse_genomes_project 18 67642753 67714225 - MGP_LPJ_P0049774 Spire1 protein_coding protein_coding MGP_LPJ_T0049775.1 MGP_LPJ_G0024444.1 mouse_genomes_project 18 67642753 67710909 - MGP_LPJ_P0049775 Spire1 protein_coding protein_coding MGP_LPJ_T0048802.1 MGP_LPJ_G0024057.1 mouse_genomes_project 18 7026150 7067039 - MGP_LPJ_P0048802 Usp14 protein_coding protein_coding MGP_LPJ_T0048803.1 MGP_LPJ_G0024057.1 mouse_genomes_project 18 7026312 7067039 - MGP_LPJ_P0048803 Usp14 protein_coding protein_coding MGP_LPJ_T0048804.1 MGP_LPJ_G0024057.1 mouse_genomes_project 18 7027618 7032298 - Usp14 protein_coding retained_intron MGP_LPJ_T0048805.1 MGP_LPJ_G0024057.1 mouse_genomes_project 18 7034274 7041164 - Usp14 protein_coding retained_intron MGP_LPJ_T0048806.1 MGP_LPJ_G0024057.1 mouse_genomes_project 18 7042100 7067039 - Usp14 protein_coding retained_intron MGP_LPJ_T0048807.1 MGP_LPJ_G0024057.1 mouse_genomes_project 18 7044746 7051581 - Usp14 protein_coding retained_intron MGP_LPJ_T0048808.1 MGP_LPJ_G0024057.1 mouse_genomes_project 18 7060374 7067039 - Usp14 protein_coding retained_intron MGP_LPJ_T0049403.1 MGP_LPJ_G0024300.1 mouse_genomes_project 18 41352461 41617661 - Ppp2r2b protein_coding processed_transcript MGP_LPJ_T0049404.1 MGP_LPJ_G0024300.1 mouse_genomes_project 18 41361658 41617452 - MGP_LPJ_P0049404 Ppp2r2b protein_coding protein_coding MGP_LPJ_T0049405.1 MGP_LPJ_G0024300.1 mouse_genomes_project 18 41361658 41780835 - MGP_LPJ_P0049405 Ppp2r2b protein_coding protein_coding MGP_LPJ_T0049406.1 MGP_LPJ_G0024300.1 mouse_genomes_project 18 41361683 41617801 - MGP_LPJ_P0049406 Ppp2r2b protein_coding protein_coding MGP_LPJ_T0049407.1 MGP_LPJ_G0024300.1 mouse_genomes_project 18 41458304 41657194 - Ppp2r2b protein_coding processed_transcript MGP_LPJ_T0049408.1 MGP_LPJ_G0024300.1 mouse_genomes_project 18 41478863 41616973 - Ppp2r2b protein_coding processed_transcript MGP_LPJ_T0048913.1 MGP_LPJ_G0024095.1 mouse_genomes_project 18 18387123 18396200 + MGP_LPJ_P0048913 Ttr protein_coding protein_coding MGP_LPJ_T0048889.1 MGP_LPJ_G0024082.1 mouse_genomes_project 18 12186686 12308205 + MGP_LPJ_P0048889 Taf4b protein_coding protein_coding MGP_LPJ_T0048890.1 MGP_LPJ_G0024082.1 mouse_genomes_project 18 12187108 12305974 + MGP_LPJ_P0048890 Taf4b protein_coding unknown_likely_coding MGP_LPJ_T0100508.1 MGP_LPJ_G0038771.1 mouse_genomes_project 18 33923378 33923574 + Snora74a snoRNA snoRNA MGP_LPJ_T0049144.1 MGP_LPJ_G0024185.1 mouse_genomes_project 18 34118027 34124904 - MGP_LPJ_P0049144 Tmem173 protein_coding protein_coding MGP_LPJ_T0049350.1 MGP_LPJ_G0024282.1 mouse_genomes_project 18 37107052 37122054 - MGP_LPJ_P0049350 Spry4 protein_coding protein_coding MGP_LPJ_T0048800.1 MGP_LPJ_G0024055.1 mouse_genomes_project 18 6727359 6727833 - MGP_LPJ_P0048800 Gm17430 protein_coding protein_coding MGP_LPJ_T0048909.1 MGP_LPJ_G0024093.1 mouse_genomes_project 18 18227347 18268403 + MGP_LPJ_P0048909 Dsg3 protein_coding protein_coding MGP_LPJ_T0010268.1 MGP_LPJ_G0008386.1 mouse_genomes_project 18 55547295 55547480 + Gm25476 miRNA miRNA MGP_LPJ_T0098512.1 MGP_LPJ_G0036787.1 mouse_genomes_project 18 2535680 2537912 - Gm26575 sense_intronic sense_intronic MGP_LPJ_T0049070.1 MGP_LPJ_G0024161.1 mouse_genomes_project 18 32937247 32958068 - MGP_LPJ_P0049070 Cdc23 protein_coding protein_coding MGP_LPJ_T0049071.1 MGP_LPJ_G0024161.1 mouse_genomes_project 18 32937979 32958068 - MGP_LPJ_P0049071 Cdc23 protein_coding protein_coding MGP_LPJ_T0049072.1 MGP_LPJ_G0024161.1 mouse_genomes_project 18 32939958 32940911 - Cdc23 protein_coding retained_intron MGP_LPJ_T0049073.1 MGP_LPJ_G0024161.1 mouse_genomes_project 18 32942354 32958051 - Cdc23 protein_coding retained_intron MGP_LPJ_T0049074.1 MGP_LPJ_G0024161.1 mouse_genomes_project 18 32942357 32943393 - Cdc23 protein_coding retained_intron MGP_LPJ_T0049075.1 MGP_LPJ_G0024161.1 mouse_genomes_project 18 32943359 32944172 - Cdc23 protein_coding retained_intron MGP_LPJ_T0049076.1 MGP_LPJ_G0024161.1 mouse_genomes_project 18 32947440 32951491 - Cdc23 protein_coding retained_intron MGP_LPJ_T0049077.1 MGP_LPJ_G0024161.1 mouse_genomes_project 18 32953184 32958051 - Cdc23 protein_coding retained_intron MGP_LPJ_T0049078.1 MGP_LPJ_G0024161.1 mouse_genomes_project 18 32954035 32958055 - Cdc23 protein_coding retained_intron MGP_LPJ_T0098209.1 MGP_LPJ_G0036490.1 mouse_genomes_project 18 32806105 32806222 + n-R5s24 rRNA rRNA MGP_LPJ_T0049012.1 MGP_LPJ_G0024139.1 mouse_genomes_project 18 30336011 30353443 - MGP_LPJ_P0049012 Proc protein_coding protein_coding MGP_LPJ_T0049454.1 MGP_LPJ_G0024321.1 mouse_genomes_project 18 45000968 45038357 - MGP_LPJ_P0049454 Trim36 protein_coding protein_coding MGP_LPJ_T0049455.1 MGP_LPJ_G0024321.1 mouse_genomes_project 18 45000968 45052388 - MGP_LPJ_P0049455 Trim36 protein_coding protein_coding MGP_LPJ_T0003817.1 MGP_LPJ_G0003431.1 mouse_genomes_project 18 35396338 35397536 - Gm37751 antisense antisense MGP_LPJ_T0049410.1 MGP_LPJ_G0024302.1 mouse_genomes_project 18 42061750 42185717 - MGP_LPJ_P0049410 Dpysl3 protein_coding protein_coding MGP_LPJ_T0049411.1 MGP_LPJ_G0024302.1 mouse_genomes_project 18 42063495 42064805 - Dpysl3 protein_coding processed_transcript MGP_LPJ_T0049412.1 MGP_LPJ_G0024302.1 mouse_genomes_project 18 42065001 42109742 - MGP_LPJ_P0049412 Dpysl3 protein_coding protein_coding MGP_LPJ_T0049413.1 MGP_LPJ_G0024302.1 mouse_genomes_project 18 42065062 42136732 - MGP_LPJ_P0049413 Dpysl3 protein_coding protein_coding MGP_LPJ_T0049414.1 MGP_LPJ_G0024302.1 mouse_genomes_project 18 42070435 42081960 - MGP_LPJ_P0049414 Dpysl3 protein_coding protein_coding MGP_LPJ_T0049415.1 MGP_LPJ_G0024302.1 mouse_genomes_project 18 42073633 42081554 - MGP_LPJ_P0049415 Dpysl3 protein_coding protein_coding MGP_LPJ_T0048919.1 MGP_LPJ_G0024099.1 mouse_genomes_project 18 18777080 18808729 + MGP_LPJ_P0048919 Rnf138 protein_coding protein_coding MGP_LPJ_T0048920.1 MGP_LPJ_G0024099.1 mouse_genomes_project 18 18777080 18808729 + MGP_LPJ_P0048920 Rnf138 protein_coding protein_coding MGP_LPJ_T0049397.1 MGP_LPJ_G0024296.1 mouse_genomes_project 18 40971158 41044052 + MGP_LPJ_P0049397 Rbm27 protein_coding protein_coding MGP_LPJ_T0049398.1 MGP_LPJ_G0024296.1 mouse_genomes_project 18 40971158 41044052 + MGP_LPJ_P0049398 Rbm27 protein_coding protein_coding MGP_LPJ_T0049059.1 MGP_LPJ_G0024158.1 mouse_genomes_project 18 32883904 32902542 - MGP_LPJ_P0049059 4933408B17Rik protein_coding protein_coding MGP_LPJ_T0049060.1 MGP_LPJ_G0024158.1 mouse_genomes_project 18 32884003 32902419 - MGP_LPJ_P0049060 4933408B17Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0049438.1 MGP_LPJ_G0024318.1 mouse_genomes_project 18 43195974 43622470 - MGP_LPJ_P0049438 Mcc protein_coding protein_coding MGP_LPJ_T0049439.1 MGP_LPJ_G0024318.1 mouse_genomes_project 18 43200501 43445636 - MGP_LPJ_P0049439 Mcc protein_coding protein_coding MGP_LPJ_T0049440.1 MGP_LPJ_G0024318.1 mouse_genomes_project 18 43290759 43293442 - Mcc protein_coding retained_intron MGP_LPJ_T0049441.1 MGP_LPJ_G0024318.1 mouse_genomes_project 18 43441919 43445654 - Mcc protein_coding retained_intron MGP_LPJ_T0049442.1 MGP_LPJ_G0024318.1 mouse_genomes_project 18 43490954 43511310 - Mcc protein_coding processed_transcript MGP_LPJ_T0049269.1 MGP_LPJ_G0024253.1 mouse_genomes_project 18 36157250 36321810 + MGP_LPJ_P0049269 Pcdhgb1 protein_coding protein_coding MGP_LPJ_T0049270.1 MGP_LPJ_G0024253.1 mouse_genomes_project 18 36157274 36163741 + Pcdhgb1 protein_coding processed_transcript MGP_LPJ_T0049199.1 MGP_LPJ_G0024204.1 mouse_genomes_project 18 35207500 35210976 + MGP_LPJ_P0049199 Wdr55 protein_coding protein_coding MGP_LPJ_T0049660.1 MGP_LPJ_G0024400.1 mouse_genomes_project 18 61455051 61468842 - MGP_LPJ_P0049660 Pcyox1l protein_coding protein_coding MGP_LPJ_T0049661.1 MGP_LPJ_G0024400.1 mouse_genomes_project 18 61457685 61468820 - MGP_LPJ_P0049661 Pcyox1l protein_coding nonsense_mediated_decay MGP_LPJ_T0049662.1 MGP_LPJ_G0024400.1 mouse_genomes_project 18 61462411 61468842 - Pcyox1l protein_coding retained_intron MGP_LPJ_T0049245.1 MGP_LPJ_G0024232.1 mouse_genomes_project 18 35830166 35834755 + MGP_LPJ_P0049245 Pcdhb7 protein_coding protein_coding MGP_LPJ_T0010273.1 MGP_LPJ_G0008391.1 mouse_genomes_project 18 60501044 60501132 + Mir5107 miRNA miRNA MGP_LPJ_T0049240.1 MGP_LPJ_G0024228.1 mouse_genomes_project 18 35786271 35789953 + MGP_LPJ_P0049240 Pcdhb3 protein_coding protein_coding MGP_LPJ_T0049523.1 MGP_LPJ_G0024350.1 mouse_genomes_project 18 51935112 52005551 + MGP_LPJ_P0049523 Sncaip protein_coding protein_coding MGP_LPJ_T0049524.1 MGP_LPJ_G0024350.1 mouse_genomes_project 18 52005474 52082609 + MGP_LPJ_P0049524 Sncaip protein_coding nonsense_mediated_decay MGP_LPJ_T0049525.1 MGP_LPJ_G0024350.1 mouse_genomes_project 18 52005474 52082609 + MGP_LPJ_P0049525 Sncaip protein_coding nonsense_mediated_decay MGP_LPJ_T0049526.1 MGP_LPJ_G0024350.1 mouse_genomes_project 18 52005474 52082316 + MGP_LPJ_P0049526 Sncaip protein_coding nonsense_mediated_decay MGP_LPJ_T0049527.1 MGP_LPJ_G0024350.1 mouse_genomes_project 18 52005520 52082042 + MGP_LPJ_P0049527 Sncaip protein_coding protein_coding MGP_LPJ_T0049528.1 MGP_LPJ_G0024350.1 mouse_genomes_project 18 52005520 52082042 + MGP_LPJ_P0049528 Sncaip protein_coding protein_coding MGP_LPJ_T0049529.1 MGP_LPJ_G0024350.1 mouse_genomes_project 18 52005520 52082121 + MGP_LPJ_P0049529 Sncaip protein_coding protein_coding MGP_LPJ_T0100513.1 MGP_LPJ_G0038776.1 mouse_genomes_project 18 55517238 55517373 + Gm23555 snoRNA snoRNA MGP_LPJ_T0050000.1 MGP_LPJ_G0024504.1 mouse_genomes_project 18 79464585 79845014 - MGP_LPJ_P0050000 Setbp1 protein_coding protein_coding MGP_LPJ_T0049467.1 MGP_LPJ_G0024329.1 mouse_genomes_project 18 45617495 45626632 - MGP_LPJ_P0049467 Atg12 protein_coding protein_coding MGP_LPJ_T0049705.1 MGP_LPJ_G0024419.1 mouse_genomes_project 18 64161093 64183290 + MGP_LPJ_P0049705 St8sia3 protein_coding protein_coding MGP_LPJ_T0049706.1 MGP_LPJ_G0024419.1 mouse_genomes_project 18 64171246 64178954 + MGP_LPJ_P0049706 St8sia3 protein_coding unknown_likely_coding MGP_LPJ_T0049707.1 MGP_LPJ_G0024419.1 mouse_genomes_project 18 64172677 64177137 + MGP_LPJ_P0049707 St8sia3 protein_coding protein_coding MGP_LPJ_T0049708.1 MGP_LPJ_G0024419.1 mouse_genomes_project 18 64172858 64176994 + St8sia3 protein_coding processed_transcript MGP_LPJ_T0049709.1 MGP_LPJ_G0024419.1 mouse_genomes_project 18 64173489 64177066 + St8sia3 protein_coding retained_intron MGP_LPJ_T0048906.1 MGP_LPJ_G0024090.1 mouse_genomes_project 18 17706414 17739545 - MGP_LPJ_P0048906 Dsc1 protein_coding protein_coding MGP_LPJ_T0048771.1 MGP_LPJ_G0024044.1 mouse_genomes_project 18 3515370 3550981 + MGP_LPJ_P0048771 4921524L21Rik protein_coding protein_coding MGP_LPJ_T0050105.1 MGP_LPJ_G0024535.1 mouse_genomes_project 18 90408798 90485890 + MGP_LPJ_P0050105 Cd226 protein_coding protein_coding MGP_LPJ_T0050106.1 MGP_LPJ_G0024535.1 mouse_genomes_project 18 90408865 90484540 + MGP_LPJ_P0050106 Cd226 protein_coding protein_coding MGP_LPJ_T0003831.1 MGP_LPJ_G0003445.1 mouse_genomes_project 18 43445034 43459555 + A930012L18Rik antisense antisense MGP_LPJ_T0003832.1 MGP_LPJ_G0003445.1 mouse_genomes_project 18 43445472 43455863 + A930012L18Rik antisense antisense MGP_LPJ_T0013316.1 MGP_LPJ_G0011407.1 mouse_genomes_project 18 52130565 52131124 + processed_pseudogene processed_pseudogene MGP_LPJ_T0049507.1 MGP_LPJ_G0024339.1 mouse_genomes_project 18 49171674 49241200 + MGP_LPJ_P0049507 Hsd17b4 protein_coding protein_coding MGP_LPJ_T0049508.1 MGP_LPJ_G0024339.1 mouse_genomes_project 18 49171967 49185764 + Hsd17b4 protein_coding processed_transcript MGP_LPJ_T0049509.1 MGP_LPJ_G0024339.1 mouse_genomes_project 18 49185520 49189516 + Hsd17b4 protein_coding retained_intron MGP_LPJ_T0049510.1 MGP_LPJ_G0024339.1 mouse_genomes_project 18 49236254 49240903 + Hsd17b4 protein_coding retained_intron MGP_LPJ_T0048796.1 MGP_LPJ_G0024051.1 mouse_genomes_project 18 6258756 6262974 - MGP_LPJ_P0048796 Gjd4 protein_coding protein_coding MGP_LPJ_T0049098.1 MGP_LPJ_G0024175.1 mouse_genomes_project 18 33919750 33939974 + MGP_LPJ_P0049098 Gm28285 protein_coding protein_coding MGP_LPJ_T0049099.1 MGP_LPJ_G0024175.1 mouse_genomes_project 18 33919754 33946628 + MGP_LPJ_P0049099 Gm28285 protein_coding protein_coding MGP_LPJ_T0049100.1 MGP_LPJ_G0024175.1 mouse_genomes_project 18 33919758 33927174 + Gm28285 protein_coding processed_transcript MGP_LPJ_T0049101.1 MGP_LPJ_G0024175.1 mouse_genomes_project 18 33919758 33939669 + Gm28285 protein_coding processed_transcript MGP_LPJ_T0049102.1 MGP_LPJ_G0024175.1 mouse_genomes_project 18 33919759 33939897 + MGP_LPJ_P0049102 Gm28285 protein_coding protein_coding MGP_LPJ_T0049103.1 MGP_LPJ_G0024175.1 mouse_genomes_project 18 33919768 33949298 + MGP_LPJ_P0049103 Gm28285 protein_coding protein_coding MGP_LPJ_T0049104.1 MGP_LPJ_G0024175.1 mouse_genomes_project 18 33919784 33939639 + Gm28285 protein_coding processed_transcript MGP_LPJ_T0049384.1 MGP_LPJ_G0024286.1 mouse_genomes_project 18 38360152 38362738 + MGP_LPJ_P0049384 Pabpc2 protein_coding protein_coding MGP_LPJ_T0049254.1 MGP_LPJ_G0024240.1 mouse_genomes_project 18 35955779 35958580 + MGP_LPJ_P0049254 Pcdhb15 protein_coding protein_coding MGP_LPJ_T0050111.1 MGP_LPJ_G0024539.1 mouse_genomes_project 18 91916823 91916991 + MGP_LPJ_P0050111 Gm21060 protein_coding protein_coding MGP_LPJ_T0049203.1 MGP_LPJ_G0024206.1 mouse_genomes_project 18 35213807 35229809 - MGP_LPJ_P0049203 Hars protein_coding protein_coding MGP_LPJ_T0010248.1 MGP_LPJ_G0008366.1 mouse_genomes_project 18 3394427 3394510 - Mir1893 miRNA miRNA MGP_LPJ_T0049090.1 MGP_LPJ_G0024170.1 mouse_genomes_project 18 33269718 33286617 - MGP_LPJ_P0049090 Hspa9 protein_coding protein_coding MGP_LPJ_T0049091.1 MGP_LPJ_G0024170.1 mouse_genomes_project 18 33270571 33271615 - Hspa9 protein_coding retained_intron MGP_LPJ_T0049092.1 MGP_LPJ_G0024170.1 mouse_genomes_project 18 33271000 33273167 - Hspa9 protein_coding retained_intron MGP_LPJ_T0049093.1 MGP_LPJ_G0024170.1 mouse_genomes_project 18 33280461 33283835 - Hspa9 protein_coding retained_intron MGP_LPJ_T0011482.1 MGP_LPJ_G0009600.1 mouse_genomes_project 18 78520488 78520841 - Gm23954 misc_RNA misc_RNA MGP_LPJ_T0017557.1 MGP_LPJ_G0015275.1 mouse_genomes_project 18 33919717 33926012 + Snhg4 processed_transcript lincRNA MGP_LPJ_T0017558.1 MGP_LPJ_G0015275.1 mouse_genomes_project 18 33919756 33921111 + Snhg4 processed_transcript retained_intron MGP_LPJ_T0017559.1 MGP_LPJ_G0015275.1 mouse_genomes_project 18 33919758 33923577 + Snhg4 processed_transcript retained_intron MGP_LPJ_T0017560.1 MGP_LPJ_G0015275.1 mouse_genomes_project 18 33919768 33922311 + Snhg4 processed_transcript retained_intron MGP_LPJ_T0017561.1 MGP_LPJ_G0015275.1 mouse_genomes_project 18 33922485 33925092 + Snhg4 processed_transcript retained_intron MGP_LPJ_T0048884.1 MGP_LPJ_G0024080.1 mouse_genomes_project 18 12023762 12087418 - MGP_LPJ_P0048884 Ss18 protein_coding protein_coding MGP_LPJ_T0048885.1 MGP_LPJ_G0024080.1 mouse_genomes_project 18 12026007 12087387 - MGP_LPJ_P0048885 Ss18 protein_coding unknown_likely_coding MGP_LPJ_T0048886.1 MGP_LPJ_G0024080.1 mouse_genomes_project 18 12048063 12087387 - MGP_LPJ_P0048886 Ss18 protein_coding unknown_likely_coding MGP_LPJ_T0048887.1 MGP_LPJ_G0024080.1 mouse_genomes_project 18 12051800 12087387 - MGP_LPJ_P0048887 Ss18 protein_coding unknown_likely_coding MGP_LPJ_T0003827.1 MGP_LPJ_G0003441.1 mouse_genomes_project 18 37545462 37546020 - Gm15334 antisense antisense MGP_LPJ_T0098405.1 MGP_LPJ_G0036686.1 mouse_genomes_project 18 75292092 75292171 - Scarna17 scaRNA scaRNA MGP_LPJ_T0007012.1 MGP_LPJ_G0005769.1 mouse_genomes_project 18 2115626 2118440 - Gm26682 lincRNA lincRNA MGP_LPJ_T0010291.1 MGP_LPJ_G0008409.1 mouse_genomes_project 18 83575604 83575664 + Mir5112 miRNA miRNA MGP_LPJ_T0048914.1 MGP_LPJ_G0024096.1 mouse_genomes_project 18 18411701 18482936 - MGP_LPJ_P0048914 B4galt6 protein_coding protein_coding MGP_LPJ_T0017580.1 MGP_LPJ_G0015282.1 mouse_genomes_project 18 56764117 56952013 - 4930511M06Rik processed_transcript processed_transcript MGP_LPJ_T0017583.1 MGP_LPJ_G0015282.1 mouse_genomes_project 18 56904457 56951626 - 4930511M06Rik processed_transcript processed_transcript MGP_LPJ_T0017587.1 MGP_LPJ_G0015282.1 mouse_genomes_project 18 56944279 56951729 - 4930511M06Rik processed_transcript processed_transcript MGP_LPJ_T0017588.1 MGP_LPJ_G0015282.1 mouse_genomes_project 18 56944932 56952207 - 4930511M06Rik processed_transcript processed_transcript MGP_LPJ_T0017589.1 MGP_LPJ_G0015282.1 mouse_genomes_project 18 56947603 56952209 - 4930511M06Rik processed_transcript processed_transcript MGP_LPJ_T0017598.1 MGP_LPJ_G0015287.1 mouse_genomes_project 18 78507666 78511175 - F830208F22Rik processed_transcript processed_transcript MGP_LPJ_T0017599.1 MGP_LPJ_G0015287.1 mouse_genomes_project 18 78507666 78510822 - F830208F22Rik processed_transcript processed_transcript MGP_LPJ_T0007035.1 MGP_LPJ_G0005786.1 mouse_genomes_project 18 36133189 36139478 + 3222401L13Rik lincRNA lincRNA MGP_LPJ_T0007036.1 MGP_LPJ_G0005786.1 mouse_genomes_project 18 36133645 36136473 + 3222401L13Rik lincRNA lincRNA MGP_LPJ_T0099246.1 MGP_LPJ_G0037509.1 mouse_genomes_project 18 653263 653327 - Gm23643 snRNA snRNA MGP_LPJ_T0048831.1 MGP_LPJ_G0024064.1 mouse_genomes_project 18 8133308 8168295 + MGP_LPJ_P0048831 Gata6 protein_coding protein_coding MGP_LPJ_T0049767.1 MGP_LPJ_G0024438.1 mouse_genomes_project 18 67356063 67377091 - MGP_LPJ_P0049767 Mppe1 protein_coding protein_coding MGP_LPJ_T0049738.1 MGP_LPJ_G0024428.1 mouse_genomes_project 18 65710355 65760933 + MGP_LPJ_P0049738 Oacyl protein_coding protein_coding MGP_LPJ_T0049739.1 MGP_LPJ_G0024428.1 mouse_genomes_project 18 65710357 65760997 + MGP_LPJ_P0049739 Oacyl protein_coding protein_coding MGP_LPJ_T0049740.1 MGP_LPJ_G0024428.1 mouse_genomes_project 18 65758411 65759784 + Oacyl protein_coding processed_transcript MGP_LPJ_T0049084.1 MGP_LPJ_G0024166.1 mouse_genomes_project 18 33092777 33159522 + MGP_LPJ_P0049084 Kdm3b protein_coding protein_coding MGP_LPJ_T0049623.1 MGP_LPJ_G0024387.1 mouse_genomes_project 18 60608677 60615463 + MGP_LPJ_P0049623 Arsi protein_coding protein_coding MGP_LPJ_T0049227.1 MGP_LPJ_G0024220.1 mouse_genomes_project 18 35476645 35676922 + MGP_LPJ_P0049227 Pcdha9 protein_coding protein_coding MGP_LPJ_T0049226.1 MGP_LPJ_G0024219.1 mouse_genomes_project 18 35453718 36313055 + MGP_LPJ_P0049226 Gm37388 protein_coding protein_coding MGP_LPJ_T0007022.1 MGP_LPJ_G0005775.1 mouse_genomes_project 18 29620927 29629678 + Gm26658 lincRNA lincRNA MGP_LPJ_T0049520.1 MGP_LPJ_G0024348.1 mouse_genomes_project 18 51802531 51822408 + MGP_LPJ_P0049520 1700034E13Rik protein_coding protein_coding MGP_LPJ_T0049521.1 MGP_LPJ_G0024348.1 mouse_genomes_project 18 51802538 51822408 + MGP_LPJ_P0049521 1700034E13Rik protein_coding protein_coding MGP_LPJ_T0049883.1 MGP_LPJ_G0024465.1 mouse_genomes_project 18 74034215 74055810 + MGP_LPJ_P0049883 Mex3c protein_coding protein_coding MGP_LPJ_T0049517.1 MGP_LPJ_G0024346.1 mouse_genomes_project 18 51665230 51680018 - MGP_LPJ_P0049517 Lox protein_coding protein_coding MGP_LPJ_T0049518.1 MGP_LPJ_G0024346.1 mouse_genomes_project 18 51666398 51679859 - MGP_LPJ_P0049518 Lox protein_coding protein_coding MGP_LPJ_T0007060.1 MGP_LPJ_G0005805.1 mouse_genomes_project 18 82045755 82055575 - 4930594M17Rik lincRNA lincRNA MGP_LPJ_T0099276.1 MGP_LPJ_G0037539.1 mouse_genomes_project 18 79236077 79236184 + Gm26430 snRNA snRNA MGP_LPJ_T0048801.1 MGP_LPJ_G0024056.1 mouse_genomes_project 18 6976180 7026203 + MGP_LPJ_P0048801 Thoc1 protein_coding protein_coding MGP_LPJ_T0050066.1 MGP_LPJ_G0024522.1 mouse_genomes_project 18 84942062 85024135 - MGP_LPJ_P0050066 Tshz1 protein_coding protein_coding MGP_LPJ_T0050067.1 MGP_LPJ_G0024522.1 mouse_genomes_project 18 84942518 85024121 - Tshz1 protein_coding processed_transcript MGP_LPJ_T0049250.1 MGP_LPJ_G0024236.1 mouse_genomes_project 18 35897401 35901820 + MGP_LPJ_P0049250 Pcdhb11 protein_coding protein_coding MGP_LPJ_T0013329.1 MGP_LPJ_G0011420.1 mouse_genomes_project 18 90766340 90766665 - processed_pseudogene processed_pseudogene MGP_LPJ_T0049902.1 MGP_LPJ_G0024472.1 mouse_genomes_project 18 74689548 74702024 - MGP_LPJ_P0049902 Ska1 protein_coding protein_coding MGP_LPJ_T0049903.1 MGP_LPJ_G0024472.1 mouse_genomes_project 18 74689548 74702024 - MGP_LPJ_P0049903 Ska1 protein_coding protein_coding MGP_LPJ_T0099279.1 MGP_LPJ_G0037542.1 mouse_genomes_project 18 83195312 83195442 - Gm25060 snRNA snRNA MGP_LPJ_T0050033.1 MGP_LPJ_G0024514.1 mouse_genomes_project 18 81200000 81262707 - MGP_LPJ_P0050033 Ctdp1 protein_coding protein_coding MGP_LPJ_T0050034.1 MGP_LPJ_G0024514.1 mouse_genomes_project 18 81200006 81232906 - MGP_LPJ_P0050034 Ctdp1 protein_coding protein_coding MGP_LPJ_T0050035.1 MGP_LPJ_G0024514.1 mouse_genomes_project 18 81200777 81232835 - Ctdp1 protein_coding processed_transcript MGP_LPJ_T0048826.1 MGP_LPJ_G0024063.1 mouse_genomes_project 18 7790598 7890126 + MGP_LPJ_P0048826 Mib1 protein_coding protein_coding MGP_LPJ_T0048827.1 MGP_LPJ_G0024063.1 mouse_genomes_project 18 7790705 7883747 + MGP_LPJ_P0048827 Mib1 protein_coding protein_coding MGP_LPJ_T0048828.1 MGP_LPJ_G0024063.1 mouse_genomes_project 18 7790794 7825000 + Mib1 protein_coding retained_intron MGP_LPJ_T0048829.1 MGP_LPJ_G0024063.1 mouse_genomes_project 18 7830083 7890252 + MGP_LPJ_P0048829 Mib1 protein_coding protein_coding MGP_LPJ_T0048830.1 MGP_LPJ_G0024063.1 mouse_genomes_project 18 7868221 7889176 + MGP_LPJ_P0048830 Mib1 protein_coding protein_coding MGP_LPJ_T0010281.1 MGP_LPJ_G0008399.1 mouse_genomes_project 18 65232471 65232537 + Mir122 miRNA miRNA MGP_LPJ_T0049433.1 MGP_LPJ_G0024315.1 mouse_genomes_project 18 43031240 43038790 + MGP_LPJ_P0049433 Npy6r protein_coding protein_coding MGP_LPJ_T0049559.1 MGP_LPJ_G0024363.1 mouse_genomes_project 18 56113499 56283975 - MGP_LPJ_P0049559 March3 protein_coding protein_coding MGP_LPJ_T0049560.1 MGP_LPJ_G0024363.1 mouse_genomes_project 18 56129564 56169112 - MGP_LPJ_P0049560 March3 protein_coding protein_coding MGP_LPJ_T0049561.1 MGP_LPJ_G0024363.1 mouse_genomes_project 18 56159519 56283942 - March3 protein_coding retained_intron MGP_LPJ_T0013331.1 MGP_LPJ_G0011422.1 mouse_genomes_project 18 91187588 91188546 - processed_pseudogene processed_pseudogene MGP_LPJ_T0049722.1 MGP_LPJ_G0024427.1 mouse_genomes_project 18 65583715 65701652 + MGP_LPJ_P0049722 Zfp532 protein_coding protein_coding MGP_LPJ_T0049723.1 MGP_LPJ_G0024427.1 mouse_genomes_project 18 65583867 65628177 + MGP_LPJ_P0049723 Zfp532 protein_coding protein_coding MGP_LPJ_T0049724.1 MGP_LPJ_G0024427.1 mouse_genomes_project 18 65584572 65628166 + MGP_LPJ_P0049724 Zfp532 protein_coding protein_coding MGP_LPJ_T0049725.1 MGP_LPJ_G0024427.1 mouse_genomes_project 18 65584578 65627734 + MGP_LPJ_P0049725 Zfp532 protein_coding protein_coding MGP_LPJ_T0049726.1 MGP_LPJ_G0024427.1 mouse_genomes_project 18 65585228 65629992 + MGP_LPJ_P0049726 Zfp532 protein_coding protein_coding MGP_LPJ_T0049727.1 MGP_LPJ_G0024427.1 mouse_genomes_project 18 65585713 65628313 + MGP_LPJ_P0049727 Zfp532 protein_coding protein_coding MGP_LPJ_T0049728.1 MGP_LPJ_G0024427.1 mouse_genomes_project 18 65585768 65627741 + MGP_LPJ_P0049728 Zfp532 protein_coding protein_coding MGP_LPJ_T0049729.1 MGP_LPJ_G0024427.1 mouse_genomes_project 18 65585892 65701150 + MGP_LPJ_P0049729 Zfp532 protein_coding nonsense_mediated_decay MGP_LPJ_T0049730.1 MGP_LPJ_G0024427.1 mouse_genomes_project 18 65586000 65701149 + MGP_LPJ_P0049730 Zfp532 protein_coding protein_coding MGP_LPJ_T0049731.1 MGP_LPJ_G0024427.1 mouse_genomes_project 18 65586087 65627940 + MGP_LPJ_P0049731 Zfp532 protein_coding protein_coding MGP_LPJ_T0049732.1 MGP_LPJ_G0024427.1 mouse_genomes_project 18 65586883 65627906 + MGP_LPJ_P0049732 Zfp532 protein_coding protein_coding MGP_LPJ_T0049733.1 MGP_LPJ_G0024427.1 mouse_genomes_project 18 65587405 65627851 + MGP_LPJ_P0049733 Zfp532 protein_coding protein_coding MGP_LPJ_T0049734.1 MGP_LPJ_G0024427.1 mouse_genomes_project 18 65623560 65629584 + Zfp532 protein_coding retained_intron MGP_LPJ_T0049735.1 MGP_LPJ_G0024427.1 mouse_genomes_project 18 65627637 65701143 + MGP_LPJ_P0049735 Zfp532 protein_coding protein_coding MGP_LPJ_T0049736.1 MGP_LPJ_G0024427.1 mouse_genomes_project 18 65629897 65693396 + Zfp532 protein_coding retained_intron MGP_LPJ_T0049737.1 MGP_LPJ_G0024427.1 mouse_genomes_project 18 65651528 65697820 + Zfp532 protein_coding processed_transcript MGP_LPJ_T0048847.1 MGP_LPJ_G0024070.1 mouse_genomes_project 18 9444511 9498292 - MGP_LPJ_P0048847 Npc1 protein_coding protein_coding MGP_LPJ_T0048848.1 MGP_LPJ_G0024070.1 mouse_genomes_project 18 9469977 9472156 - Npc1 protein_coding processed_transcript MGP_LPJ_T0048849.1 MGP_LPJ_G0024070.1 mouse_genomes_project 18 9477259 9498250 - Npc1 protein_coding retained_intron MGP_LPJ_T0048850.1 MGP_LPJ_G0024070.1 mouse_genomes_project 18 9477731 9498218 - Npc1 protein_coding retained_intron MGP_LPJ_T0048851.1 MGP_LPJ_G0024070.1 mouse_genomes_project 18 9482948 9485209 - Npc1 protein_coding processed_transcript MGP_LPJ_T0049537.1 MGP_LPJ_G0024355.1 mouse_genomes_project 18 52883063 52948548 - MGP_LPJ_P0049537 Cep120 protein_coding protein_coding MGP_LPJ_T0050078.1 MGP_LPJ_G0024526.1 mouse_genomes_project 18 85630157 85648891 - MGP_LPJ_P0050078 Cndp2 protein_coding protein_coding MGP_LPJ_T0050079.1 MGP_LPJ_G0024526.1 mouse_genomes_project 18 85630157 85645247 - MGP_LPJ_P0050079 Cndp2 protein_coding protein_coding MGP_LPJ_T0098015.1 MGP_LPJ_G0036296.1 mouse_genomes_project 18 90510956 90514695 - pseudogene pseudogene MGP_LPJ_T0049966.1 MGP_LPJ_G0024490.1 mouse_genomes_project 18 77678889 77779979 + MGP_LPJ_P0049966 Pias2 protein_coding protein_coding MGP_LPJ_T0049967.1 MGP_LPJ_G0024490.1 mouse_genomes_project 18 77679291 77779979 + MGP_LPJ_P0049967 Pias2 protein_coding protein_coding MGP_LPJ_T0049968.1 MGP_LPJ_G0024490.1 mouse_genomes_project 18 77679291 77771210 + MGP_LPJ_P0049968 Pias2 protein_coding protein_coding MGP_LPJ_T0011477.1 MGP_LPJ_G0009595.1 mouse_genomes_project 18 55273903 55274209 - Gm22484 misc_RNA misc_RNA MGP_LPJ_T0013294.1 MGP_LPJ_G0011385.1 mouse_genomes_project 18 22155272 22156751 + processed_pseudogene processed_pseudogene MGP_LPJ_T0049418.1 MGP_LPJ_G0024305.1 mouse_genomes_project 18 42519678 42522790 + MGP_LPJ_P0049418 Scgb3a2 protein_coding protein_coding MGP_LPJ_T0049419.1 MGP_LPJ_G0024305.1 mouse_genomes_project 18 42519716 42522790 + MGP_LPJ_P0049419 Scgb3a2 protein_coding protein_coding MGP_LPJ_T0049420.1 MGP_LPJ_G0024305.1 mouse_genomes_project 18 42519716 42522790 + MGP_LPJ_P0049420 Scgb3a2 protein_coding protein_coding MGP_LPJ_T0049079.1 MGP_LPJ_G0024162.1 mouse_genomes_project 18 33001428 33035801 - MGP_LPJ_P0049079 Gfra3 protein_coding protein_coding MGP_LPJ_T0007037.1 MGP_LPJ_G0005787.1 mouse_genomes_project 18 36739604 36751750 - 1700086O06Rik lincRNA lincRNA MGP_LPJ_T0007038.1 MGP_LPJ_G0005787.1 mouse_genomes_project 18 36739604 36751383 - 1700086O06Rik lincRNA lincRNA MGP_LPJ_T0048997.1 MGP_LPJ_G0024127.1 mouse_genomes_project 18 29769391 29801553 - MGP_LPJ_P0048997 Slc25a46 protein_coding protein_coding MGP_LPJ_T0048881.1 MGP_LPJ_G0024077.1 mouse_genomes_project 18 10314008 10331179 + MGP_LPJ_P0048881 Hrh4 protein_coding protein_coding MGP_LPJ_T0049255.1 MGP_LPJ_G0024241.1 mouse_genomes_project 18 35960051 35965277 + MGP_LPJ_P0049255 Pcdhb16 protein_coding protein_coding MGP_LPJ_T0050093.1 MGP_LPJ_G0024532.1 mouse_genomes_project 18 87763694 87770866 + MGP_LPJ_P0050093 Cbln2 protein_coding protein_coding MGP_LPJ_T0050094.1 MGP_LPJ_G0024532.1 mouse_genomes_project 18 87764104 87770175 + MGP_LPJ_P0050094 Cbln2 protein_coding protein_coding MGP_LPJ_T0050095.1 MGP_LPJ_G0024532.1 mouse_genomes_project 18 87764649 87770864 + MGP_LPJ_P0050095 Cbln2 protein_coding protein_coding MGP_LPJ_T0050096.1 MGP_LPJ_G0024532.1 mouse_genomes_project 18 87765632 87770866 + MGP_LPJ_P0050096 Cbln2 protein_coding protein_coding MGP_LPJ_T0049569.1 MGP_LPJ_G0024368.1 mouse_genomes_project 18 56932694 57138107 + MGP_LPJ_P0049569 1700011I03Rik protein_coding protein_coding MGP_LPJ_T0049570.1 MGP_LPJ_G0024368.1 mouse_genomes_project 18 56932743 57138107 + MGP_LPJ_P0049570 1700011I03Rik protein_coding protein_coding MGP_LPJ_T0049571.1 MGP_LPJ_G0024368.1 mouse_genomes_project 18 56932796 56964872 + MGP_LPJ_P0049571 1700011I03Rik protein_coding protein_coding MGP_LPJ_T0049572.1 MGP_LPJ_G0024368.1 mouse_genomes_project 18 56961093 57138048 + MGP_LPJ_P0049572 1700011I03Rik protein_coding protein_coding MGP_LPJ_T0049748.1 MGP_LPJ_G0024430.1 mouse_genomes_project 18 65888773 65906222 + MGP_LPJ_P0049748 Grp protein_coding protein_coding MGP_LPJ_T0049749.1 MGP_LPJ_G0024430.1 mouse_genomes_project 18 65889445 65896192 + MGP_LPJ_P0049749 Grp protein_coding protein_coding MGP_LPJ_T0049750.1 MGP_LPJ_G0024430.1 mouse_genomes_project 18 65889455 65906221 + MGP_LPJ_P0049750 Grp protein_coding protein_coding MGP_LPJ_T0101298.1 MGP_LPJ_G0039522.1 mouse_genomes_project 18 75841029 75852245 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101299.1 MGP_LPJ_G0039522.1 mouse_genomes_project 18 75841300 75841558 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0101300.1 MGP_LPJ_G0039522.1 mouse_genomes_project 18 75848965 75852257 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0050040.1 MGP_LPJ_G0024516.1 mouse_genomes_project 18 81526451 81732566 - MGP_LPJ_P0050040 Atp9b protein_coding protein_coding MGP_LPJ_T0050041.1 MGP_LPJ_G0024516.1 mouse_genomes_project 18 81526692 81732447 - MGP_LPJ_P0050041 Atp9b protein_coding unknown_likely_coding MGP_LPJ_T0017550.1 MGP_LPJ_G0015274.1 mouse_genomes_project 18 2457086 2549155 - Gm10125 processed_transcript antisense MGP_LPJ_T0017551.1 MGP_LPJ_G0015274.1 mouse_genomes_project 18 2481278 2483969 - Gm10125 processed_transcript retained_intron MGP_LPJ_T0017552.1 MGP_LPJ_G0015274.1 mouse_genomes_project 18 2488182 2549155 - Gm10125 processed_transcript processed_transcript MGP_LPJ_T0017553.1 MGP_LPJ_G0015274.1 mouse_genomes_project 18 2488254 2548953 - Gm10125 processed_transcript antisense MGP_LPJ_T0017554.1 MGP_LPJ_G0015274.1 mouse_genomes_project 18 2528536 2550272 - Gm10125 processed_transcript antisense MGP_LPJ_T0017555.1 MGP_LPJ_G0015274.1 mouse_genomes_project 18 2528536 2549144 - Gm10125 processed_transcript antisense MGP_LPJ_T0017556.1 MGP_LPJ_G0015274.1 mouse_genomes_project 18 2537841 2548952 - Gm10125 processed_transcript antisense MGP_LPJ_T0049786.1 MGP_LPJ_G0024451.1 mouse_genomes_project 18 68465705 68505825 - MGP_LPJ_P0049786 Fam210a protein_coding protein_coding MGP_LPJ_T0049787.1 MGP_LPJ_G0024451.1 mouse_genomes_project 18 68481430 68505694 - MGP_LPJ_P0049787 Fam210a protein_coding protein_coding MGP_LPJ_T0049683.1 MGP_LPJ_G0024414.1 mouse_genomes_project 18 62765755 62797599 + MGP_LPJ_P0049683 Apcdd1 protein_coding protein_coding MGP_LPJ_T0049684.1 MGP_LPJ_G0024414.1 mouse_genomes_project 18 62765757 62796868 + MGP_LPJ_P0049684 Apcdd1 protein_coding protein_coding MGP_LPJ_T0010278.1 MGP_LPJ_G0008396.1 mouse_genomes_project 18 61136831 61136897 - Mir378a miRNA miRNA MGP_LPJ_T0101294.1 MGP_LPJ_G0039520.1 mouse_genomes_project 18 35559873 35561615 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101295.1 MGP_LPJ_G0039520.1 mouse_genomes_project 18 35561378 35562337 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0049243.1 MGP_LPJ_G0024231.1 mouse_genomes_project 18 35822417 35824758 + MGP_LPJ_P0049243 Pcdhb6 protein_coding protein_coding MGP_LPJ_T0049244.1 MGP_LPJ_G0024231.1 mouse_genomes_project 18 35822442 35826170 + MGP_LPJ_P0049244 Pcdhb6 protein_coding protein_coding MGP_LPJ_T0003840.1 MGP_LPJ_G0003450.1 mouse_genomes_project 18 64058545 64184324 - St8sia3os antisense antisense MGP_LPJ_T0003841.1 MGP_LPJ_G0003450.1 mouse_genomes_project 18 64103199 64184324 - St8sia3os antisense antisense MGP_LPJ_T0003842.1 MGP_LPJ_G0003450.1 mouse_genomes_project 18 64176557 64184315 - St8sia3os antisense antisense MGP_LPJ_T0003843.1 MGP_LPJ_G0003450.1 mouse_genomes_project 18 64183263 64184301 - St8sia3os antisense antisense MGP_LPJ_T0048894.1 MGP_LPJ_G0024085.1 mouse_genomes_project 18 12886044 13161911 - MGP_LPJ_P0048894 Chst9 protein_coding protein_coding MGP_LPJ_T0048895.1 MGP_LPJ_G0024085.1 mouse_genomes_project 18 12886044 13199684 - MGP_LPJ_P0048895 Chst9 protein_coding nonsense_mediated_decay MGP_LPJ_T0007031.1 MGP_LPJ_G0005783.1 mouse_genomes_project 18 33066500 33071398 + 2010110K18Rik lincRNA lincRNA MGP_LPJ_T0007032.1 MGP_LPJ_G0005783.1 mouse_genomes_project 18 33066603 33073359 + 2010110K18Rik lincRNA lincRNA MGP_LPJ_T0049086.1 MGP_LPJ_G0024168.1 mouse_genomes_project 18 33181273 33188471 + MGP_LPJ_P0049086 Egr1 protein_coding protein_coding MGP_LPJ_T0049087.1 MGP_LPJ_G0024168.1 mouse_genomes_project 18 33182656 33188443 + MGP_LPJ_P0049087 Egr1 protein_coding protein_coding MGP_LPJ_T0049776.1 MGP_LPJ_G0024445.1 mouse_genomes_project 18 67782607 67809399 - MGP_LPJ_P0049776 Cep76 protein_coding protein_coding MGP_LPJ_T0049196.1 MGP_LPJ_G0024202.1 mouse_genomes_project 18 35189631 35191830 - MGP_LPJ_P0049196 Ndufa2 protein_coding protein_coding MGP_LPJ_T0048923.1 MGP_LPJ_G0024102.1 mouse_genomes_project 18 19329674 19446213 - MGP_LPJ_P0048923 Klhl14 protein_coding protein_coding MGP_LPJ_T0048924.1 MGP_LPJ_G0024102.1 mouse_genomes_project 18 19329676 19455428 - MGP_LPJ_P0048924 Klhl14 protein_coding protein_coding MGP_LPJ_T0048922.1 MGP_LPJ_G0024101.1 mouse_genomes_project 18 18915279 19089975 - MGP_LPJ_P0048922 Garem protein_coding protein_coding MGP_LPJ_T0013314.1 MGP_LPJ_G0011405.1 mouse_genomes_project 18 49266594 49267339 - processed_pseudogene processed_pseudogene MGP_LPJ_T0049782.1 MGP_LPJ_G0024448.1 mouse_genomes_project 18 67954429 67976186 + MGP_LPJ_P0049782 Seh1l protein_coding protein_coding MGP_LPJ_T0049242.1 MGP_LPJ_G0024230.1 mouse_genomes_project 18 35805769 35813006 + MGP_LPJ_P0049242 Pcdhb5 protein_coding protein_coding MGP_LPJ_T0013332.1 MGP_LPJ_G0011423.1 mouse_genomes_project 18 91596698 91597160 - processed_pseudogene processed_pseudogene MGP_LPJ_T0049260.1 MGP_LPJ_G0024246.1 mouse_genomes_project 18 35995877 36000582 + MGP_LPJ_P0049260 Pcdhb21 protein_coding protein_coding MGP_LPJ_T0049710.1 MGP_LPJ_G0024420.1 mouse_genomes_project 18 64253850 64317814 + MGP_LPJ_P0049710 Onecut2 protein_coding protein_coding MGP_LPJ_T0049711.1 MGP_LPJ_G0024420.1 mouse_genomes_project 18 64253850 64317816 + MGP_LPJ_P0049711 Onecut2 protein_coding protein_coding MGP_LPJ_T0101296.1 MGP_LPJ_G0039521.1 mouse_genomes_project 18 36130171 36130646 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0101297.1 MGP_LPJ_G0039521.1 mouse_genomes_project 18 36130491 36131911 - transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0049082.1 MGP_LPJ_G0024165.1 mouse_genomes_project 18 33073579 33089534 + MGP_LPJ_P0049082 Fam53c protein_coding protein_coding MGP_LPJ_T0049083.1 MGP_LPJ_G0024165.1 mouse_genomes_project 18 33074229 33089512 + MGP_LPJ_P0049083 Fam53c protein_coding protein_coding MGP_LPJ_T0010251.1 MGP_LPJ_G0008369.1 mouse_genomes_project 18 7852667 7852735 - Mir133a-1 miRNA miRNA MGP_LPJ_T0050001.1 MGP_LPJ_G0024505.1 mouse_genomes_project 18 80812067 80887241 + MGP_LPJ_P0050001 Pard6g protein_coding protein_coding MGP_LPJ_T0049624.1 MGP_LPJ_G0024388.1 mouse_genomes_project 18 60622499 60691134 + MGP_LPJ_P0049624 Camk2a protein_coding protein_coding MGP_LPJ_T0049625.1 MGP_LPJ_G0024388.1 mouse_genomes_project 18 60622513 60641374 + Camk2a protein_coding retained_intron MGP_LPJ_T0049626.1 MGP_LPJ_G0024388.1 mouse_genomes_project 18 60622513 60689397 + MGP_LPJ_P0049626 Camk2a protein_coding protein_coding MGP_LPJ_T0049627.1 MGP_LPJ_G0024388.1 mouse_genomes_project 18 60622606 60641392 + MGP_LPJ_P0049627 Camk2a protein_coding protein_coding MGP_LPJ_T0049628.1 MGP_LPJ_G0024388.1 mouse_genomes_project 18 60623830 60653622 + MGP_LPJ_P0049628 Camk2a protein_coding protein_coding MGP_LPJ_T0049629.1 MGP_LPJ_G0024388.1 mouse_genomes_project 18 60661318 60687851 + MGP_LPJ_P0049629 Camk2a protein_coding protein_coding MGP_LPJ_T0049630.1 MGP_LPJ_G0024388.1 mouse_genomes_project 18 60661364 60688685 + MGP_LPJ_P0049630 Camk2a protein_coding protein_coding MGP_LPJ_T0049484.1 MGP_LPJ_G0024335.1 mouse_genomes_project 18 46338442 46339075 + MGP_LPJ_P0049484 protein_coding protein_coding MGP_LPJ_T0048778.1 MGP_LPJ_G0024047.1 mouse_genomes_project 18 4005243 4217268 - MGP_LPJ_P0048778 Armc4 protein_coding protein_coding MGP_LPJ_T0049539.1 MGP_LPJ_G0024357.1 mouse_genomes_project 18 54138100 54246350 - MGP_LPJ_P0049539 Zfp608 protein_coding protein_coding MGP_LPJ_T0010253.1 MGP_LPJ_G0008371.1 mouse_genomes_project 18 7855239 7855311 - Mir1a-2 miRNA miRNA MGP_LPJ_T0003821.1 MGP_LPJ_G0003435.1 mouse_genomes_project 18 35661392 35661831 - Gm38097 antisense antisense MGP_LPJ_T0048856.1 MGP_LPJ_G0024072.1 mouse_genomes_project 18 9601406 9859997 + MGP_LPJ_P0048856 Lama3 protein_coding protein_coding MGP_LPJ_T0048857.1 MGP_LPJ_G0024072.1 mouse_genomes_project 18 9601611 9859647 + MGP_LPJ_P0048857 Lama3 protein_coding unknown_likely_coding MGP_LPJ_T0048858.1 MGP_LPJ_G0024072.1 mouse_genomes_project 18 9772600 9859997 + MGP_LPJ_P0048858 Lama3 protein_coding protein_coding MGP_LPJ_T0049051.1 MGP_LPJ_G0024154.1 mouse_genomes_project 18 32703052 32735955 + MGP_LPJ_P0049051 Pkd2l2 protein_coding protein_coding MGP_LPJ_T0049052.1 MGP_LPJ_G0024154.1 mouse_genomes_project 18 32703052 32736948 + MGP_LPJ_P0049052 Pkd2l2 protein_coding protein_coding MGP_LPJ_T0049970.1 MGP_LPJ_G0024492.1 mouse_genomes_project 18 77811379 77891398 + MGP_LPJ_P0049970 St8sia5 protein_coding protein_coding MGP_LPJ_T0049971.1 MGP_LPJ_G0024492.1 mouse_genomes_project 18 77811505 77891268 + MGP_LPJ_P0049971 St8sia5 protein_coding protein_coding MGP_LPJ_T0013318.1 MGP_LPJ_G0011409.1 mouse_genomes_project 18 52130576 52131121 + processed_pseudogene processed_pseudogene MGP_LPJ_T0049616.1 MGP_LPJ_G0024385.1 mouse_genomes_project 18 60482312 60501131 + MGP_LPJ_P0049616 Cd74 protein_coding protein_coding MGP_LPJ_T0007011.1 MGP_LPJ_G0005768.1 mouse_genomes_project 18 1751170 1789757 + lincRNA lincRNA MGP_LPJ_T0049643.1 MGP_LPJ_G0024395.1 mouse_genomes_project 18 60935418 61012332 + MGP_LPJ_P0049643 Pde6a protein_coding protein_coding MGP_LPJ_T0049644.1 MGP_LPJ_G0024395.1 mouse_genomes_project 18 60994311 61012332 + MGP_LPJ_P0049644 Pde6a protein_coding protein_coding MGP_LPJ_T0048882.1 MGP_LPJ_G0024078.1 mouse_genomes_project 18 11040982 11333698 - MGP_LPJ_P0048882 Zfp521 protein_coding protein_coding MGP_LPJ_T0048880.1 MGP_LPJ_G0024076.1 mouse_genomes_project 18 10276424 10298960 + MGP_LPJ_P0048880 Impact protein_coding protein_coding MGP_LPJ_T0049229.1 MGP_LPJ_G0024222.1 mouse_genomes_project 18 35491645 35494968 + Pcdha11 protein_coding retained_intron MGP_LPJ_T0049230.1 MGP_LPJ_G0024222.1 mouse_genomes_project 18 35491647 35649965 + Pcdha11 protein_coding retained_intron MGP_LPJ_T0049231.1 MGP_LPJ_G0024222.1 mouse_genomes_project 18 35491685 35676922 + MGP_LPJ_P0049231 Pcdha11 protein_coding protein_coding MGP_LPJ_T0049232.1 MGP_LPJ_G0024222.1 mouse_genomes_project 18 35491765 35676653 + MGP_LPJ_P0049232 Pcdha11 protein_coding protein_coding MGP_LPJ_T0049233.1 MGP_LPJ_G0024222.1 mouse_genomes_project 18 35493185 35674483 + MGP_LPJ_P0049233 Pcdha11 protein_coding protein_coding MGP_LPJ_T0049457.1 MGP_LPJ_G0024323.1 mouse_genomes_project 18 45134926 45172404 - MGP_LPJ_P0049457 Ccdc112 protein_coding protein_coding MGP_LPJ_T0011472.1 MGP_LPJ_G0009590.1 mouse_genomes_project 18 39424650 39424955 - Gm22515 misc_RNA misc_RNA MGP_LPJ_T0049472.1 MGP_LPJ_G0024332.1 mouse_genomes_project 18 45826475 45835725 + MGP_LPJ_P0049472 Arl14epl protein_coding protein_coding MGP_LPJ_T0049993.1 MGP_LPJ_G0024500.1 mouse_genomes_project 18 78730461 78744114 - MGP_LPJ_P0049993 Siglec15 protein_coding protein_coding MGP_LPJ_T0098208.1 MGP_LPJ_G0036489.1 mouse_genomes_project 18 22609398 22609513 - n-R5s23 rRNA rRNA MGP_LPJ_T0049944.1 MGP_LPJ_G0024488.1 mouse_genomes_project 18 77535135 77578412 + MGP_LPJ_P0049944 Hdhd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0049946.1 MGP_LPJ_G0024488.1 mouse_genomes_project 18 77551008 77579134 + MGP_LPJ_P0049946 Hdhd2 protein_coding protein_coding MGP_LPJ_T0049947.1 MGP_LPJ_G0024488.1 mouse_genomes_project 18 77551008 77567816 + MGP_LPJ_P0049947 Hdhd2 protein_coding protein_coding MGP_LPJ_T0049948.1 MGP_LPJ_G0024488.1 mouse_genomes_project 18 77551019 77567816 + MGP_LPJ_P0049948 Hdhd2 protein_coding protein_coding MGP_LPJ_T0049949.1 MGP_LPJ_G0024488.1 mouse_genomes_project 18 77551019 77578412 + MGP_LPJ_P0049949 Hdhd2 protein_coding protein_coding MGP_LPJ_T0049950.1 MGP_LPJ_G0024488.1 mouse_genomes_project 18 77551044 77562670 + MGP_LPJ_P0049950 Hdhd2 protein_coding protein_coding MGP_LPJ_T0049951.1 MGP_LPJ_G0024488.1 mouse_genomes_project 18 77551277 77560830 + MGP_LPJ_P0049951 Hdhd2 protein_coding protein_coding MGP_LPJ_T0049952.1 MGP_LPJ_G0024488.1 mouse_genomes_project 18 77551277 77579865 + MGP_LPJ_P0049952 Hdhd2 protein_coding protein_coding MGP_LPJ_T0049953.1 MGP_LPJ_G0024488.1 mouse_genomes_project 18 77551310 77579134 + MGP_LPJ_P0049953 Hdhd2 protein_coding protein_coding MGP_LPJ_T0049954.1 MGP_LPJ_G0024488.1 mouse_genomes_project 18 77551329 77579865 + MGP_LPJ_P0049954 Hdhd2 protein_coding protein_coding MGP_LPJ_T0048835.1 MGP_LPJ_G0024067.1 mouse_genomes_project 18 9235381 9374732 - MGP_LPJ_P0048835 Tmem241 protein_coding protein_coding MGP_LPJ_T0048836.1 MGP_LPJ_G0024067.1 mouse_genomes_project 18 9324026 9374768 - MGP_LPJ_P0048836 Tmem241 protein_coding protein_coding MGP_LPJ_T0048897.1 MGP_LPJ_G0024087.1 mouse_genomes_project 18 14072043 14300044 - MGP_LPJ_P0048897 Cdh2 protein_coding protein_coding MGP_LPJ_T0048898.1 MGP_LPJ_G0024087.1 mouse_genomes_project 18 14072189 14156525 - MGP_LPJ_P0048898 Cdh2 protein_coding protein_coding MGP_LPJ_T0048899.1 MGP_LPJ_G0024087.1 mouse_genomes_project 18 14260438 14299254 - Cdh2 protein_coding retained_intron MGP_LPJ_T0050090.1 MGP_LPJ_G0024530.1 mouse_genomes_project 18 85925664 85930032 - MGP_LPJ_P0050090 Timm21 protein_coding unknown_likely_coding MGP_LPJ_T0049081.1 MGP_LPJ_G0024164.1 mouse_genomes_project 18 33051320 33052678 + MGP_LPJ_P0049081 Gm3550 protein_coding protein_coding MGP_LPJ_T0007013.1 MGP_LPJ_G0005770.1 mouse_genomes_project 18 7774454 7779232 + 4930563E18Rik lincRNA lincRNA MGP_LPJ_T0007034.1 MGP_LPJ_G0005785.1 mouse_genomes_project 18 36100392 36101253 + 4930517L18Rik lincRNA lincRNA MGP_LPJ_T0049214.1 MGP_LPJ_G0024210.1 mouse_genomes_project 18 35401591 35676922 + MGP_LPJ_P0049214 Pcdha2 protein_coding protein_coding MGP_LPJ_T0049215.1 MGP_LPJ_G0024210.1 mouse_genomes_project 18 35401610 35676653 + MGP_LPJ_P0049215 Pcdha2 protein_coding protein_coding MGP_LPJ_T0048823.1 MGP_LPJ_G0024061.1 mouse_genomes_project 18 7694339 7704331 + MGP_LPJ_P0048823 Snrpd1 protein_coding protein_coding MGP_LPJ_T0049470.1 MGP_LPJ_G0024331.1 mouse_genomes_project 18 45741312 45803780 + MGP_LPJ_P0049470 Lvrn protein_coding protein_coding MGP_LPJ_T0049471.1 MGP_LPJ_G0024331.1 mouse_genomes_project 18 45741465 45834316 + MGP_LPJ_P0049471 Lvrn protein_coding unknown_likely_coding MGP_LPJ_T0003816.1 MGP_LPJ_G0003430.1 mouse_genomes_project 18 21635348 21637206 - Gm15972 antisense antisense MGP_LPJ_T0013321.1 MGP_LPJ_G0011412.1 mouse_genomes_project 18 55259042 55260048 + processed_pseudogene processed_pseudogene MGP_LPJ_T0048719.1 MGP_LPJ_G0024038.1 mouse_genomes_project 18 1859388 2068811 + MGP_LPJ_P0048719 Svil protein_coding protein_coding MGP_LPJ_T0048720.1 MGP_LPJ_G0024038.1 mouse_genomes_project 18 1859415 2005515 + Svil protein_coding retained_intron MGP_LPJ_T0048721.1 MGP_LPJ_G0024038.1 mouse_genomes_project 18 1859553 2005431 + Svil protein_coding retained_intron MGP_LPJ_T0048722.1 MGP_LPJ_G0024038.1 mouse_genomes_project 18 1937111 1993950 + MGP_LPJ_P0048722 Svil protein_coding protein_coding MGP_LPJ_T0048723.1 MGP_LPJ_G0024038.1 mouse_genomes_project 18 1937916 2068132 + MGP_LPJ_P0048723 Svil protein_coding protein_coding MGP_LPJ_T0048724.1 MGP_LPJ_G0024038.1 mouse_genomes_project 18 1938234 1947106 + Svil protein_coding processed_transcript MGP_LPJ_T0048725.1 MGP_LPJ_G0024038.1 mouse_genomes_project 18 1980021 2067954 + MGP_LPJ_P0048725 Svil protein_coding protein_coding MGP_LPJ_T0048726.1 MGP_LPJ_G0024038.1 mouse_genomes_project 18 1987313 2067962 + MGP_LPJ_P0048726 Svil protein_coding protein_coding MGP_LPJ_T0048727.1 MGP_LPJ_G0024038.1 mouse_genomes_project 18 1987315 2067686 + MGP_LPJ_P0048727 Svil protein_coding nonsense_mediated_decay MGP_LPJ_T0048728.1 MGP_LPJ_G0024038.1 mouse_genomes_project 18 1993647 2068808 + MGP_LPJ_P0048728 Svil protein_coding protein_coding MGP_LPJ_T0048729.1 MGP_LPJ_G0024038.1 mouse_genomes_project 18 2011290 2068811 + MGP_LPJ_P0048729 Svil protein_coding nonsense_mediated_decay MGP_LPJ_T0048730.1 MGP_LPJ_G0024038.1 mouse_genomes_project 18 2043981 2045117 + Svil protein_coding retained_intron MGP_LPJ_T0048731.1 MGP_LPJ_G0024038.1 mouse_genomes_project 18 2053256 2066543 + MGP_LPJ_P0048731 Svil protein_coding protein_coding MGP_LPJ_T0048732.1 MGP_LPJ_G0024038.1 mouse_genomes_project 18 2063784 2068738 + Svil protein_coding retained_intron MGP_LPJ_T0049295.1 MGP_LPJ_G0024269.1 mouse_genomes_project 18 36293383 36321813 + MGP_LPJ_P0049295 Pcdhga8 protein_coding protein_coding MGP_LPJ_T0049296.1 MGP_LPJ_G0024269.1 mouse_genomes_project 18 36293705 36321813 + MGP_LPJ_P0049296 Pcdhga8 protein_coding protein_coding MGP_LPJ_T0049297.1 MGP_LPJ_G0024269.1 mouse_genomes_project 18 36293760 36296860 + Pcdhga8 protein_coding retained_intron MGP_LPJ_T0049204.1 MGP_LPJ_G0024207.1 mouse_genomes_project 18 35229611 35237962 + Hars2 protein_coding processed_transcript MGP_LPJ_T0049205.1 MGP_LPJ_G0024207.1 mouse_genomes_project 18 35229611 35239906 + MGP_LPJ_P0049205 Hars2 protein_coding protein_coding MGP_LPJ_T0049206.1 MGP_LPJ_G0024207.1 mouse_genomes_project 18 35229834 35239038 + MGP_LPJ_P0049206 Hars2 protein_coding protein_coding MGP_LPJ_T0049207.1 MGP_LPJ_G0024207.1 mouse_genomes_project 18 35229872 35233810 + Hars2 protein_coding retained_intron MGP_LPJ_T0049208.1 MGP_LPJ_G0024207.1 mouse_genomes_project 18 35234357 35235606 + Hars2 protein_coding retained_intron MGP_LPJ_T0049209.1 MGP_LPJ_G0024207.1 mouse_genomes_project 18 35235163 35237503 + Hars2 protein_coding retained_intron MGP_LPJ_T0049210.1 MGP_LPJ_G0024207.1 mouse_genomes_project 18 35237356 35238797 + Hars2 protein_coding retained_intron MGP_LPJ_T0003805.1 MGP_LPJ_G0003423.1 mouse_genomes_project 18 3394006 3400636 + Gm28529 antisense antisense MGP_LPJ_T0003806.1 MGP_LPJ_G0003423.1 mouse_genomes_project 18 3394018 3394988 + Gm28529 antisense antisense MGP_LPJ_T0098216.1 MGP_LPJ_G0036497.1 mouse_genomes_project 18 73990204 73990352 - n-R5-8s1 rRNA rRNA MGP_LPJ_T0048798.1 MGP_LPJ_G0024053.1 mouse_genomes_project 18 6617075 6620946 - MGP_LPJ_P0048798 Cetn1 protein_coding protein_coding MGP_LPJ_T0049557.1 MGP_LPJ_G0024362.1 mouse_genomes_project 18 56053441 56105204 + MGP_LPJ_P0049557 Lmnb1 protein_coding protein_coding MGP_LPJ_T0049558.1 MGP_LPJ_G0024362.1 mouse_genomes_project 18 56078569 56083574 + Lmnb1 protein_coding retained_intron MGP_LPJ_T0049672.1 MGP_LPJ_G0024405.1 mouse_genomes_project 18 61740668 61821593 + MGP_LPJ_P0049672 Sh3tc2 protein_coding protein_coding MGP_LPJ_T0001032.1 MGP_LPJ_G0000957.1 mouse_genomes_project 18 2544812 2548476 - TEC TEC MGP_LPJ_T0100519.1 MGP_LPJ_G0038782.1 mouse_genomes_project 18 75528363 75528429 + Snord58b snoRNA snoRNA MGP_LPJ_T0049387.1 MGP_LPJ_G0024289.1 mouse_genomes_project 18 38868019 39156397 + MGP_LPJ_P0049387 Kctd16 protein_coding protein_coding MGP_LPJ_T0003850.1 MGP_LPJ_G0003455.1 mouse_genomes_project 18 81787820 81788942 + Gm27239 antisense antisense MGP_LPJ_T0100503.1 MGP_LPJ_G0038766.1 mouse_genomes_project 18 32048060 32048192 + Gm23639 snoRNA snoRNA MGP_LPJ_T0001041.1 MGP_LPJ_G0000966.1 mouse_genomes_project 18 61717266 61717511 - TEC TEC MGP_LPJ_T0099253.1 MGP_LPJ_G0037516.1 mouse_genomes_project 18 21698735 21698837 - Gm23207 snRNA snRNA MGP_LPJ_T0011471.1 MGP_LPJ_G0009589.1 mouse_genomes_project 18 37115151 37115270 + Gm27804 misc_RNA misc_RNA MGP_LPJ_T0099266.1 MGP_LPJ_G0037529.1 mouse_genomes_project 18 57072812 57072918 - Gm26038 snRNA snRNA MGP_LPJ_T0049898.1 MGP_LPJ_G0024470.1 mouse_genomes_project 18 74403384 74446796 - MGP_LPJ_P0049898 Mapk4 protein_coding protein_coding MGP_LPJ_T0049899.1 MGP_LPJ_G0024470.1 mouse_genomes_project 18 74403388 74546556 - MGP_LPJ_P0049899 Mapk4 protein_coding nonsense_mediated_decay MGP_LPJ_T0049900.1 MGP_LPJ_G0024470.1 mouse_genomes_project 18 74447529 74547523 - Mapk4 protein_coding processed_transcript MGP_LPJ_T0048939.1 MGP_LPJ_G0024106.1 mouse_genomes_project 18 21280214 21536374 + MGP_LPJ_P0048939 Dtna protein_coding protein_coding MGP_LPJ_T0048940.1 MGP_LPJ_G0024106.1 mouse_genomes_project 18 21280214 21477558 + MGP_LPJ_P0048940 Dtna protein_coding protein_coding MGP_LPJ_T0048941.1 MGP_LPJ_G0024106.1 mouse_genomes_project 18 21495736 21511549 + MGP_LPJ_P0048941 Dtna protein_coding unknown_likely_coding MGP_LPJ_T0049785.1 MGP_LPJ_G0024450.1 mouse_genomes_project 18 68125930 68461068 + MGP_LPJ_P0049785 Ldlrad4 protein_coding protein_coding MGP_LPJ_T0049443.1 MGP_LPJ_G0024319.1 mouse_genomes_project 18 43638607 43707983 + MGP_LPJ_P0049443 Ythdc2 protein_coding protein_coding MGP_LPJ_T0049444.1 MGP_LPJ_G0024319.1 mouse_genomes_project 18 43659704 43661031 + Ythdc2 protein_coding retained_intron MGP_LPJ_T0049445.1 MGP_LPJ_G0024319.1 mouse_genomes_project 18 43667314 43707990 + MGP_LPJ_P0049445 Ythdc2 protein_coding nonsense_mediated_decay MGP_LPJ_T0049446.1 MGP_LPJ_G0024319.1 mouse_genomes_project 18 43667504 43668036 + Ythdc2 protein_coding retained_intron MGP_LPJ_T0048817.1 MGP_LPJ_G0024060.1 mouse_genomes_project 18 7634061 7682660 - MGP_LPJ_P0048817 Esco1 protein_coding unknown_likely_coding MGP_LPJ_T0048818.1 MGP_LPJ_G0024060.1 mouse_genomes_project 18 7635030 7666007 - Esco1 protein_coding processed_transcript MGP_LPJ_T0048819.1 MGP_LPJ_G0024060.1 mouse_genomes_project 18 7635039 7682673 - MGP_LPJ_P0048819 Esco1 protein_coding protein_coding MGP_LPJ_T0048820.1 MGP_LPJ_G0024060.1 mouse_genomes_project 18 7635047 7682896 - MGP_LPJ_P0048820 Esco1 protein_coding protein_coding MGP_LPJ_T0048821.1 MGP_LPJ_G0024060.1 mouse_genomes_project 18 7635047 7682653 - MGP_LPJ_P0048821 Esco1 protein_coding protein_coding MGP_LPJ_T0048822.1 MGP_LPJ_G0024060.1 mouse_genomes_project 18 7635058 7682653 - Esco1 protein_coding processed_transcript MGP_LPJ_T0049460.1 MGP_LPJ_G0024326.1 mouse_genomes_project 18 45440195 45480331 - MGP_LPJ_P0049460 Tmed7 protein_coding protein_coding MGP_LPJ_T0049462.1 MGP_LPJ_G0024326.1 mouse_genomes_project 18 45466082 45480533 - Tmed7 protein_coding retained_intron MGP_LPJ_T0049463.1 MGP_LPJ_G0024326.1 mouse_genomes_project 18 45468175 45480552 - MGP_LPJ_P0049463 Tmed7 protein_coding protein_coding MGP_LPJ_T0050110.1 MGP_LPJ_G0024538.1 mouse_genomes_project 18 91901938 91914604 + MGP_LPJ_P0050110 unknown_likely_coding unknown_likely_coding MGP_LPJ_T0049765.1 MGP_LPJ_G0024437.1 mouse_genomes_project 18 67207536 67357326 + MGP_LPJ_P0049765 Gnal protein_coding protein_coding MGP_LPJ_T0049766.1 MGP_LPJ_G0024437.1 mouse_genomes_project 18 67260202 67357326 + MGP_LPJ_P0049766 Gnal protein_coding protein_coding MGP_LPJ_T0098207.1 MGP_LPJ_G0036488.1 mouse_genomes_project 18 17476663 17476761 + Gm24238 rRNA rRNA MGP_LPJ_T0049249.1 MGP_LPJ_G0024235.1 mouse_genomes_project 18 35884992 35887843 + MGP_LPJ_P0049249 Pcdhb10 protein_coding protein_coding MGP_LPJ_T0099264.1 MGP_LPJ_G0037527.1 mouse_genomes_project 18 51300329 51300436 - Gm22259 snRNA snRNA MGP_LPJ_T0011464.1 MGP_LPJ_G0009582.1 mouse_genomes_project 18 17320559 17320856 + Gm25392 misc_RNA misc_RNA MGP_LPJ_T0049023.1 MGP_LPJ_G0024145.1 mouse_genomes_project 18 31074002 31103128 + MGP_LPJ_P0049023 Wdr36 protein_coding protein_coding MGP_LPJ_T0049024.1 MGP_LPJ_G0024145.1 mouse_genomes_project 18 31074002 31103198 + MGP_LPJ_P0049024 Wdr36 protein_coding protein_coding MGP_LPJ_T0098206.1 MGP_LPJ_G0036487.1 mouse_genomes_project 18 9855406 9855520 - Gm22340 rRNA rRNA MGP_LPJ_T0007016.1 MGP_LPJ_G0005772.1 mouse_genomes_project 18 9048537 9067100 - Gm6277 lincRNA lincRNA MGP_LPJ_T0050019.1 MGP_LPJ_G0024512.1 mouse_genomes_project 18 81037559 81076335 + MGP_LPJ_P0050019 Pqlc1 protein_coding protein_coding MGP_LPJ_T0050020.1 MGP_LPJ_G0024512.1 mouse_genomes_project 18 81037609 81067083 + MGP_LPJ_P0050020 Pqlc1 protein_coding protein_coding MGP_LPJ_T0050021.1 MGP_LPJ_G0024512.1 mouse_genomes_project 18 81039486 81076423 + MGP_LPJ_P0050021 Pqlc1 protein_coding protein_coding MGP_LPJ_T0050022.1 MGP_LPJ_G0024512.1 mouse_genomes_project 18 81040077 81067769 + MGP_LPJ_P0050022 Pqlc1 protein_coding protein_coding MGP_LPJ_T0050023.1 MGP_LPJ_G0024512.1 mouse_genomes_project 18 81040525 81076414 + MGP_LPJ_P0050023 Pqlc1 protein_coding protein_coding MGP_LPJ_T0050024.1 MGP_LPJ_G0024512.1 mouse_genomes_project 18 81040529 81058864 + Pqlc1 protein_coding retained_intron MGP_LPJ_T0050025.1 MGP_LPJ_G0024512.1 mouse_genomes_project 18 81040547 81076422 + MGP_LPJ_P0050025 Pqlc1 protein_coding protein_coding MGP_LPJ_T0050026.1 MGP_LPJ_G0024512.1 mouse_genomes_project 18 81040548 81057045 + Pqlc1 protein_coding retained_intron MGP_LPJ_T0050027.1 MGP_LPJ_G0024512.1 mouse_genomes_project 18 81040548 81076412 + MGP_LPJ_P0050027 Pqlc1 protein_coding protein_coding MGP_LPJ_T0050028.1 MGP_LPJ_G0024512.1 mouse_genomes_project 18 81040559 81076410 + MGP_LPJ_P0050028 Pqlc1 protein_coding protein_coding MGP_LPJ_T0050029.1 MGP_LPJ_G0024512.1 mouse_genomes_project 18 81047183 81047829 + Pqlc1 protein_coding processed_transcript MGP_LPJ_T0049645.1 MGP_LPJ_G0024396.1 mouse_genomes_project 18 61020530 61139456 - MGP_LPJ_P0049645 Ppargc1b protein_coding protein_coding MGP_LPJ_T0049646.1 MGP_LPJ_G0024396.1 mouse_genomes_project 18 61020903 61139425 - MGP_LPJ_P0049646 Ppargc1b protein_coding protein_coding MGP_LPJ_T0049647.1 MGP_LPJ_G0024396.1 mouse_genomes_project 18 61126835 61139425 - Ppargc1b protein_coding processed_transcript MGP_LPJ_T0049399.1 MGP_LPJ_G0024297.1 mouse_genomes_project 18 41099617 41102328 + MGP_LPJ_P0049399 Pou4f3 protein_coding protein_coding MGP_LPJ_T0100501.1 MGP_LPJ_G0038764.1 mouse_genomes_project 18 29647844 29647977 - Gm25396 snoRNA snoRNA MGP_LPJ_T0049741.1 MGP_LPJ_G0024429.1 mouse_genomes_project 18 65815184 65832304 + MGP_LPJ_P0049741 Sec11c protein_coding protein_coding MGP_LPJ_T0049742.1 MGP_LPJ_G0024429.1 mouse_genomes_project 18 65815185 65832295 + MGP_LPJ_P0049742 Sec11c protein_coding nonsense_mediated_decay MGP_LPJ_T0049743.1 MGP_LPJ_G0024429.1 mouse_genomes_project 18 65815207 65827367 + MGP_LPJ_P0049743 Sec11c protein_coding protein_coding MGP_LPJ_T0049744.1 MGP_LPJ_G0024429.1 mouse_genomes_project 18 65815238 65832296 + Sec11c protein_coding retained_intron MGP_LPJ_T0049745.1 MGP_LPJ_G0024429.1 mouse_genomes_project 18 65815937 65827417 + Sec11c protein_coding processed_transcript MGP_LPJ_T0049746.1 MGP_LPJ_G0024429.1 mouse_genomes_project 18 65821224 65832299 + Sec11c protein_coding processed_transcript MGP_LPJ_T0049747.1 MGP_LPJ_G0024429.1 mouse_genomes_project 18 65828652 65832299 + Sec11c protein_coding processed_transcript MGP_LPJ_T0049211.1 MGP_LPJ_G0024208.1 mouse_genomes_project 18 35241268 35248065 + MGP_LPJ_P0049211 Zmat2 protein_coding protein_coding MGP_LPJ_T0099277.1 MGP_LPJ_G0037540.1 mouse_genomes_project 18 79360130 79360290 + Gm23895 snRNA snRNA MGP_LPJ_T0003811.1 MGP_LPJ_G0003428.1 mouse_genomes_project 18 18328296 18387134 - Gm16090 antisense antisense MGP_LPJ_T0048779.1 MGP_LPJ_G0024048.1 mouse_genomes_project 18 4259838 4553157 - MGP_LPJ_P0048779 Mpp7 protein_coding protein_coding MGP_LPJ_T0048953.1 MGP_LPJ_G0024111.1 mouse_genomes_project 18 21897399 21908508 - MGP_LPJ_P0048953 Zfp24 protein_coding protein_coding MGP_LPJ_T0048954.1 MGP_LPJ_G0024111.1 mouse_genomes_project 18 21901622 21908018 - MGP_LPJ_P0048954 Zfp24 protein_coding protein_coding MGP_LPJ_T0048955.1 MGP_LPJ_G0024111.1 mouse_genomes_project 18 21905668 21908068 - MGP_LPJ_P0048955 Zfp24 protein_coding protein_coding MGP_LPJ_T0049562.1 MGP_LPJ_G0024364.1 mouse_genomes_project 18 56324077 56343508 - MGP_LPJ_P0049562 C330018D20Rik protein_coding protein_coding MGP_LPJ_T0049563.1 MGP_LPJ_G0024364.1 mouse_genomes_project 18 56325858 56343494 - MGP_LPJ_P0049563 C330018D20Rik protein_coding protein_coding MGP_LPJ_T0049564.1 MGP_LPJ_G0024364.1 mouse_genomes_project 18 56336659 56343386 - C330018D20Rik protein_coding processed_transcript MGP_LPJ_T0049273.1 MGP_LPJ_G0024255.1 mouse_genomes_project 18 36167321 36321813 + MGP_LPJ_P0049273 Pcdhgb2 protein_coding protein_coding MGP_LPJ_T0049274.1 MGP_LPJ_G0024255.1 mouse_genomes_project 18 36167328 36170072 + Pcdhgb2 protein_coding retained_intron MGP_LPJ_T0100502.1 MGP_LPJ_G0038765.1 mouse_genomes_project 18 30858214 30858351 - Gm25826 snoRNA snoRNA MGP_LPJ_T0001045.1 MGP_LPJ_G0000970.1 mouse_genomes_project 18 85323926 85327404 - TEC TEC MGP_LPJ_T0010262.1 MGP_LPJ_G0008380.1 mouse_genomes_project 18 36334532 36334588 - Mir6979 miRNA miRNA MGP_LPJ_T0013293.1 MGP_LPJ_G0011384.1 mouse_genomes_project 18 19107876 19108176 + processed_pseudogene processed_pseudogene MGP_LPJ_T0010277.1 MGP_LPJ_G0008395.1 mouse_genomes_project 18 61136809 61136922 + Gm25301 miRNA miRNA MGP_LPJ_T0049268.1 MGP_LPJ_G0024252.1 mouse_genomes_project 18 36151328 36321813 + MGP_LPJ_P0049268 Pcdhga3 protein_coding protein_coding MGP_LPJ_T0099272.1 MGP_LPJ_G0037535.1 mouse_genomes_project 18 64667467 64667529 + Gm23016 snRNA snRNA MGP_LPJ_T0048950.1 MGP_LPJ_G0024108.1 mouse_genomes_project 18 21840143 21850126 + MGP_LPJ_P0048950 Zfp397 protein_coding protein_coding MGP_LPJ_T0100492.1 MGP_LPJ_G0038755.1 mouse_genomes_project 18 6615865 6615993 + Gm22765 snoRNA snoRNA MGP_LPJ_T0049617.1 MGP_LPJ_G0024386.1 mouse_genomes_project 18 60502723 60543058 - MGP_LPJ_P0049617 Tcof1 protein_coding protein_coding MGP_LPJ_T0049618.1 MGP_LPJ_G0024386.1 mouse_genomes_project 18 60502723 60543016 - MGP_LPJ_P0049618 Tcof1 protein_coding protein_coding MGP_LPJ_T0049619.1 MGP_LPJ_G0024386.1 mouse_genomes_project 18 60504899 60543046 - MGP_LPJ_P0049619 Tcof1 protein_coding nonsense_mediated_decay MGP_LPJ_T0049620.1 MGP_LPJ_G0024386.1 mouse_genomes_project 18 60506932 60543005 - MGP_LPJ_P0049620 Tcof1 protein_coding protein_coding MGP_LPJ_T0049621.1 MGP_LPJ_G0024386.1 mouse_genomes_project 18 60517044 60518005 - Tcof1 protein_coding retained_intron MGP_LPJ_T0049622.1 MGP_LPJ_G0024386.1 mouse_genomes_project 18 60528802 60542533 - MGP_LPJ_P0049622 Tcof1 protein_coding protein_coding MGP_LPJ_T0098021.1 MGP_LPJ_G0036302.1 mouse_genomes_project 19 61405118 61405701 - pseudogene pseudogene MGP_LPJ_T0051317.1 MGP_LPJ_G0024944.1 mouse_genomes_project 19 27538913 27584202 + MGP_LPJ_P0051317 Rcl1 protein_coding protein_coding MGP_LPJ_T0051046.1 MGP_LPJ_G0024809.1 mouse_genomes_project 19 9042422 9056630 - MGP_LPJ_P0051046 Oosp2 protein_coding protein_coding MGP_LPJ_T0051047.1 MGP_LPJ_G0024809.1 mouse_genomes_project 19 9042423 9056673 - MGP_LPJ_P0051047 Oosp2 protein_coding protein_coding MGP_LPJ_T0050681.1 MGP_LPJ_G0024688.1 mouse_genomes_project 19 3858899 3863538 + MGP_LPJ_P0050681 Trmt112 protein_coding protein_coding MGP_LPJ_T0050682.1 MGP_LPJ_G0024688.1 mouse_genomes_project 19 3858948 3863517 + MGP_LPJ_P0050682 Trmt112 protein_coding protein_coding MGP_LPJ_T0050683.1 MGP_LPJ_G0024688.1 mouse_genomes_project 19 3859354 3861448 + Trmt112 protein_coding retained_intron MGP_LPJ_T0050684.1 MGP_LPJ_G0024688.1 mouse_genomes_project 19 3859365 3863517 + MGP_LPJ_P0050684 Trmt112 protein_coding protein_coding MGP_LPJ_T0050285.1 MGP_LPJ_G0024581.1 mouse_genomes_project 19 1183907 1276587 - MGP_LPJ_P0050285 Kdm2a protein_coding protein_coding MGP_LPJ_T0050286.1 MGP_LPJ_G0024581.1 mouse_genomes_project 19 1185658 1273036 - MGP_LPJ_P0050286 Kdm2a protein_coding protein_coding MGP_LPJ_T0050287.1 MGP_LPJ_G0024581.1 mouse_genomes_project 19 1191345 1196005 - MGP_LPJ_P0050287 Kdm2a protein_coding nonsense_mediated_decay MGP_LPJ_T0050288.1 MGP_LPJ_G0024581.1 mouse_genomes_project 19 1192269 1196260 - Kdm2a protein_coding retained_intron MGP_LPJ_T0050289.1 MGP_LPJ_G0024581.1 mouse_genomes_project 19 1198362 1207457 - MGP_LPJ_P0050289 Kdm2a protein_coding protein_coding MGP_LPJ_T0050290.1 MGP_LPJ_G0024581.1 mouse_genomes_project 19 1202644 1207375 - MGP_LPJ_P0050290 Kdm2a protein_coding nonsense_mediated_decay MGP_LPJ_T0050291.1 MGP_LPJ_G0024581.1 mouse_genomes_project 19 1214939 1273039 - MGP_LPJ_P0050291 Kdm2a protein_coding protein_coding MGP_LPJ_T0050292.1 MGP_LPJ_G0024581.1 mouse_genomes_project 19 1222994 1273035 - Kdm2a protein_coding retained_intron MGP_LPJ_T0050293.1 MGP_LPJ_G0024581.1 mouse_genomes_project 19 1224984 1238944 - MGP_LPJ_P0050293 Kdm2a protein_coding protein_coding MGP_LPJ_T0050294.1 MGP_LPJ_G0024581.1 mouse_genomes_project 19 1225401 1273027 - Kdm2a protein_coding retained_intron MGP_LPJ_T0050295.1 MGP_LPJ_G0024581.1 mouse_genomes_project 19 1264406 1273036 - MGP_LPJ_P0050295 Kdm2a protein_coding protein_coding MGP_LPJ_T0050296.1 MGP_LPJ_G0024581.1 mouse_genomes_project 19 1268435 1273054 - Kdm2a protein_coding retained_intron MGP_LPJ_T0051670.1 MGP_LPJ_G0025072.1 mouse_genomes_project 19 41508822 41513128 - MGP_LPJ_P0051670 Sfrp5 protein_coding protein_coding MGP_LPJ_T0050401.1 MGP_LPJ_G0024629.1 mouse_genomes_project 19 2422653 2426253 + MGP_LPJ_P0050401 Efemp2 protein_coding protein_coding MGP_LPJ_T0050402.1 MGP_LPJ_G0024629.1 mouse_genomes_project 19 2422995 2424749 + MGP_LPJ_P0050402 Efemp2 protein_coding protein_coding MGP_LPJ_T0050403.1 MGP_LPJ_G0024629.1 mouse_genomes_project 19 2423368 2430540 + MGP_LPJ_P0050403 Efemp2 protein_coding protein_coding MGP_LPJ_T0050404.1 MGP_LPJ_G0024629.1 mouse_genomes_project 19 2423387 2427030 + Efemp2 protein_coding retained_intron MGP_LPJ_T0050405.1 MGP_LPJ_G0024629.1 mouse_genomes_project 19 2423420 2429428 + MGP_LPJ_P0050405 Efemp2 protein_coding protein_coding MGP_LPJ_T0050406.1 MGP_LPJ_G0024629.1 mouse_genomes_project 19 2423420 2430540 + MGP_LPJ_P0050406 Efemp2 protein_coding protein_coding MGP_LPJ_T0050407.1 MGP_LPJ_G0024629.1 mouse_genomes_project 19 2423427 2426931 + MGP_LPJ_P0050407 Efemp2 protein_coding protein_coding MGP_LPJ_T0050408.1 MGP_LPJ_G0024629.1 mouse_genomes_project 19 2423430 2430540 + MGP_LPJ_P0050408 Efemp2 protein_coding protein_coding MGP_LPJ_T0050409.1 MGP_LPJ_G0024629.1 mouse_genomes_project 19 2423457 2424149 + Efemp2 protein_coding retained_intron MGP_LPJ_T0050410.1 MGP_LPJ_G0024629.1 mouse_genomes_project 19 2423748 2426995 + MGP_LPJ_P0050410 Efemp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0050411.1 MGP_LPJ_G0024629.1 mouse_genomes_project 19 2423800 2430462 + MGP_LPJ_P0050411 Efemp2 protein_coding protein_coding MGP_LPJ_T0050412.1 MGP_LPJ_G0024629.1 mouse_genomes_project 19 2423985 2428766 + MGP_LPJ_P0050412 Efemp2 protein_coding protein_coding MGP_LPJ_T0050413.1 MGP_LPJ_G0024629.1 mouse_genomes_project 19 2428731 2429603 + MGP_LPJ_P0050413 Efemp2 protein_coding protein_coding MGP_LPJ_T0050414.1 MGP_LPJ_G0024629.1 mouse_genomes_project 19 2428809 2430346 + MGP_LPJ_P0050414 Efemp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0051896.1 MGP_LPJ_G0025144.1 mouse_genomes_project 19 46324228 46340449 + MGP_LPJ_P0051896 Borcs7 protein_coding protein_coding MGP_LPJ_T0051911.1 MGP_LPJ_G0025154.1 mouse_genomes_project 19 46813729 46818466 - MGP_LPJ_P0051911 Calhm1 protein_coding protein_coding MGP_LPJ_T0051783.1 MGP_LPJ_G0025113.1 mouse_genomes_project 19 44570147 44574192 + MGP_LPJ_P0051783 Kazald1 protein_coding protein_coding MGP_LPJ_T0051784.1 MGP_LPJ_G0025113.1 mouse_genomes_project 19 44571045 44574192 + MGP_LPJ_P0051784 Kazald1 protein_coding protein_coding MGP_LPJ_T0052006.1 MGP_LPJ_G0025189.1 mouse_genomes_project 19 55905399 56115428 + MGP_LPJ_P0052006 Tcf7l2 protein_coding protein_coding MGP_LPJ_T0052007.1 MGP_LPJ_G0025189.1 mouse_genomes_project 19 55905399 56115428 + MGP_LPJ_P0052007 Tcf7l2 protein_coding protein_coding MGP_LPJ_T0052008.1 MGP_LPJ_G0025189.1 mouse_genomes_project 19 55905409 56115026 + MGP_LPJ_P0052008 Tcf7l2 protein_coding protein_coding MGP_LPJ_T0052009.1 MGP_LPJ_G0025189.1 mouse_genomes_project 19 55905409 56115003 + MGP_LPJ_P0052009 Tcf7l2 protein_coding protein_coding MGP_LPJ_T0052010.1 MGP_LPJ_G0025189.1 mouse_genomes_project 19 55905473 56114489 + MGP_LPJ_P0052010 Tcf7l2 protein_coding protein_coding MGP_LPJ_T0052011.1 MGP_LPJ_G0025189.1 mouse_genomes_project 19 55905473 56107012 + MGP_LPJ_P0052011 Tcf7l2 protein_coding protein_coding MGP_LPJ_T0052012.1 MGP_LPJ_G0025189.1 mouse_genomes_project 19 55905644 56113983 + MGP_LPJ_P0052012 Tcf7l2 protein_coding protein_coding MGP_LPJ_T0052013.1 MGP_LPJ_G0025189.1 mouse_genomes_project 19 55905828 56093170 + MGP_LPJ_P0052013 Tcf7l2 protein_coding protein_coding MGP_LPJ_T0052014.1 MGP_LPJ_G0025189.1 mouse_genomes_project 19 55905829 56093169 + MGP_LPJ_P0052014 Tcf7l2 protein_coding protein_coding MGP_LPJ_T0052015.1 MGP_LPJ_G0025189.1 mouse_genomes_project 19 55905829 56093170 + MGP_LPJ_P0052015 Tcf7l2 protein_coding protein_coding MGP_LPJ_T0052016.1 MGP_LPJ_G0025189.1 mouse_genomes_project 19 55905855 56090996 + Tcf7l2 protein_coding retained_intron MGP_LPJ_T0052017.1 MGP_LPJ_G0025189.1 mouse_genomes_project 19 55905855 56107009 + MGP_LPJ_P0052017 Tcf7l2 protein_coding protein_coding MGP_LPJ_T0052018.1 MGP_LPJ_G0025189.1 mouse_genomes_project 19 55905904 56115428 + MGP_LPJ_P0052018 Tcf7l2 protein_coding protein_coding MGP_LPJ_T0052019.1 MGP_LPJ_G0025189.1 mouse_genomes_project 19 55905936 56115005 + MGP_LPJ_P0052019 Tcf7l2 protein_coding protein_coding MGP_LPJ_T0052020.1 MGP_LPJ_G0025189.1 mouse_genomes_project 19 55906040 56113983 + MGP_LPJ_P0052020 Tcf7l2 protein_coding protein_coding MGP_LPJ_T0052021.1 MGP_LPJ_G0025189.1 mouse_genomes_project 19 56073787 56101388 + Tcf7l2 protein_coding processed_transcript MGP_LPJ_T0052022.1 MGP_LPJ_G0025189.1 mouse_genomes_project 19 56074969 56100736 + MGP_LPJ_P0052022 Tcf7l2 protein_coding protein_coding MGP_LPJ_T0052023.1 MGP_LPJ_G0025189.1 mouse_genomes_project 19 56075945 56115003 + MGP_LPJ_P0052023 Tcf7l2 protein_coding protein_coding MGP_LPJ_T0052024.1 MGP_LPJ_G0025189.1 mouse_genomes_project 19 56076097 56093084 + Tcf7l2 protein_coding processed_transcript MGP_LPJ_T0052025.1 MGP_LPJ_G0025189.1 mouse_genomes_project 19 56078734 56100811 + Tcf7l2 protein_coding processed_transcript MGP_LPJ_T0052026.1 MGP_LPJ_G0025189.1 mouse_genomes_project 19 56078978 56101374 + MGP_LPJ_P0052026 Tcf7l2 protein_coding protein_coding MGP_LPJ_T0051906.1 MGP_LPJ_G0025150.1 mouse_genomes_project 19 46738074 46754483 + MGP_LPJ_P0051906 Taf5 protein_coding protein_coding MGP_LPJ_T0050333.1 MGP_LPJ_G0024595.1 mouse_genomes_project 19 1747787 1750950 + MGP_LPJ_P0050333 Ccdc87 protein_coding protein_coding MGP_LPJ_T0051473.1 MGP_LPJ_G0025004.1 mouse_genomes_project 19 35938674 36045127 + MGP_LPJ_P0051473 Btaf1 protein_coding protein_coding MGP_LPJ_T0051103.1 MGP_LPJ_G0024845.1 mouse_genomes_project 19 10453333 10454334 + MGP_LPJ_P0051103 Olfr1445 protein_coding protein_coding MGP_LPJ_T0051062.1 MGP_LPJ_G0024819.1 mouse_genomes_project 19 9318998 9351842 + MGP_LPJ_P0051062 Patl1 protein_coding protein_coding MGP_LPJ_T0050987.1 MGP_LPJ_G0024791.1 mouse_genomes_project 19 8436666 8470137 - MGP_LPJ_P0050987 1700017D01Rik protein_coding protein_coding MGP_LPJ_T0050988.1 MGP_LPJ_G0024791.1 mouse_genomes_project 19 8448908 8451430 - 1700017D01Rik protein_coding retained_intron MGP_LPJ_T0050861.1 MGP_LPJ_G0024740.1 mouse_genomes_project 19 6063024 6072821 + MGP_LPJ_P0050861 Lbhd1 protein_coding protein_coding MGP_LPJ_T0050862.1 MGP_LPJ_G0024740.1 mouse_genomes_project 19 6063216 6066334 + Lbhd1 protein_coding retained_intron MGP_LPJ_T0050863.1 MGP_LPJ_G0024740.1 mouse_genomes_project 19 6063222 6066551 + MGP_LPJ_P0050863 Lbhd1 protein_coding protein_coding MGP_LPJ_T0010340.1 MGP_LPJ_G0008458.1 mouse_genomes_project 19 50002005 50002130 + Gm27749 miRNA miRNA MGP_LPJ_T0051200.1 MGP_LPJ_G0024905.1 mouse_genomes_project 19 19396157 19476422 - MGP_LPJ_P0051200 Gda protein_coding protein_coding MGP_LPJ_T0051201.1 MGP_LPJ_G0024905.1 mouse_genomes_project 19 19423899 19476520 - Gda protein_coding retained_intron MGP_LPJ_T0051780.1 MGP_LPJ_G0025112.1 mouse_genomes_project 19 44535143 44543892 + MGP_LPJ_P0051780 Sfxn3 protein_coding protein_coding MGP_LPJ_T0051781.1 MGP_LPJ_G0025112.1 mouse_genomes_project 19 44535143 44543892 + MGP_LPJ_P0051781 Sfxn3 protein_coding protein_coding MGP_LPJ_T0051782.1 MGP_LPJ_G0025112.1 mouse_genomes_project 19 44535143 44543892 + MGP_LPJ_P0051782 Sfxn3 protein_coding protein_coding MGP_LPJ_T0051114.1 MGP_LPJ_G0024856.1 mouse_genomes_project 19 10721663 10722764 - MGP_LPJ_P0051114 Olfr1459 protein_coding protein_coding MGP_LPJ_T0051626.1 MGP_LPJ_G0025059.1 mouse_genomes_project 19 41207660 41214127 + MGP_LPJ_P0051626 Pgam1 protein_coding protein_coding MGP_LPJ_T0011486.1 MGP_LPJ_G0009604.1 mouse_genomes_project 19 2809456 2809608 - Gm27533 misc_RNA misc_RNA MGP_LPJ_T0051090.1 MGP_LPJ_G0024840.1 mouse_genomes_project 19 10256608 10280762 + MGP_LPJ_P0051090 Keg1 protein_coding protein_coding MGP_LPJ_T0051091.1 MGP_LPJ_G0024840.1 mouse_genomes_project 19 10256609 10276907 + Keg1 protein_coding processed_transcript MGP_LPJ_T0051092.1 MGP_LPJ_G0024840.1 mouse_genomes_project 19 10256615 10279424 + Keg1 protein_coding retained_intron MGP_LPJ_T0051093.1 MGP_LPJ_G0024840.1 mouse_genomes_project 19 10256615 10279867 + MGP_LPJ_P0051093 Keg1 protein_coding protein_coding MGP_LPJ_T0051094.1 MGP_LPJ_G0024840.1 mouse_genomes_project 19 10256626 10275691 + Keg1 protein_coding retained_intron MGP_LPJ_T0051095.1 MGP_LPJ_G0024840.1 mouse_genomes_project 19 10256636 10275613 + Keg1 protein_coding retained_intron MGP_LPJ_T0051096.1 MGP_LPJ_G0024840.1 mouse_genomes_project 19 10256636 10279977 + MGP_LPJ_P0051096 Keg1 protein_coding protein_coding MGP_LPJ_T0051872.1 MGP_LPJ_G0025135.1 mouse_genomes_project 19 45921497 45930361 - MGP_LPJ_P0051872 Cuedc2 protein_coding protein_coding MGP_LPJ_T0051873.1 MGP_LPJ_G0025135.1 mouse_genomes_project 19 45921497 45930361 - MGP_LPJ_P0051873 Cuedc2 protein_coding protein_coding MGP_LPJ_T0050840.1 MGP_LPJ_G0024732.1 mouse_genomes_project 19 5972054 5974379 + MGP_LPJ_P0050840 Zbtb3 protein_coding protein_coding MGP_LPJ_T0051226.1 MGP_LPJ_G0024916.1 mouse_genomes_project 19 21843296 21845052 + MGP_LPJ_P0051226 Gm9938 protein_coding protein_coding MGP_LPJ_T0050748.1 MGP_LPJ_G0024711.1 mouse_genomes_project 19 4401873 4410153 + MGP_LPJ_P0050748 2700081O15Rik protein_coding protein_coding MGP_LPJ_T0050749.1 MGP_LPJ_G0024711.1 mouse_genomes_project 19 4402965 4405337 + 2700081O15Rik protein_coding retained_intron MGP_LPJ_T0050750.1 MGP_LPJ_G0024711.1 mouse_genomes_project 19 4404338 4407587 + MGP_LPJ_P0050750 2700081O15Rik protein_coding protein_coding MGP_LPJ_T0050751.1 MGP_LPJ_G0024711.1 mouse_genomes_project 19 4404657 4406921 + MGP_LPJ_P0050751 2700081O15Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0050752.1 MGP_LPJ_G0024711.1 mouse_genomes_project 19 4404667 4406573 + MGP_LPJ_P0050752 2700081O15Rik protein_coding protein_coding MGP_LPJ_T0050753.1 MGP_LPJ_G0024711.1 mouse_genomes_project 19 4405276 4409789 + 2700081O15Rik protein_coding retained_intron MGP_LPJ_T0050428.1 MGP_LPJ_G0024634.1 mouse_genomes_project 19 2505289 2516728 - MGP_LPJ_P0050428 Ovol1 protein_coding protein_coding MGP_LPJ_T0051809.1 MGP_LPJ_G0025121.1 mouse_genomes_project 19 45284197 45286055 - MGP_LPJ_P0051809 Npm3 protein_coding protein_coding MGP_LPJ_T0051810.1 MGP_LPJ_G0025121.1 mouse_genomes_project 19 45285006 45286013 - Npm3 protein_coding retained_intron MGP_LPJ_T0007094.1 MGP_LPJ_G0005828.1 mouse_genomes_project 19 27947757 27984368 - A930007I19Rik lincRNA lincRNA MGP_LPJ_T0007095.1 MGP_LPJ_G0005828.1 mouse_genomes_project 19 27948336 27985533 - A930007I19Rik lincRNA lincRNA MGP_LPJ_T0007096.1 MGP_LPJ_G0005828.1 mouse_genomes_project 19 27966113 27984363 - A930007I19Rik lincRNA lincRNA MGP_LPJ_T0052120.1 MGP_LPJ_G0025217.1 mouse_genomes_project 19 59682552 59732395 - MGP_LPJ_P0052120 Pdzd8 protein_coding protein_coding MGP_LPJ_T0051610.1 MGP_LPJ_G0025051.1 mouse_genomes_project 19 40549107 40664696 - MGP_LPJ_P0051610 Pik3ap1 protein_coding protein_coding MGP_LPJ_T0051333.1 MGP_LPJ_G0024951.1 mouse_genomes_project 19 27984655 28071735 + MGP_LPJ_P0051333 Ric1 protein_coding protein_coding MGP_LPJ_T0051334.1 MGP_LPJ_G0024951.1 mouse_genomes_project 19 27984708 28024789 + MGP_LPJ_P0051334 Ric1 protein_coding protein_coding MGP_LPJ_T0051335.1 MGP_LPJ_G0024951.1 mouse_genomes_project 19 27984755 28043925 + Ric1 protein_coding retained_intron MGP_LPJ_T0051336.1 MGP_LPJ_G0024951.1 mouse_genomes_project 19 27995320 28069107 + MGP_LPJ_P0051336 Ric1 protein_coding protein_coding MGP_LPJ_T0051337.1 MGP_LPJ_G0024951.1 mouse_genomes_project 19 28060434 28070092 + MGP_LPJ_P0051337 Ric1 protein_coding nonsense_mediated_decay MGP_LPJ_T0051338.1 MGP_LPJ_G0024951.1 mouse_genomes_project 19 28062166 28064804 + Ric1 protein_coding retained_intron MGP_LPJ_T0051339.1 MGP_LPJ_G0024951.1 mouse_genomes_project 19 28062751 28070803 + MGP_LPJ_P0051339 Ric1 protein_coding nonsense_mediated_decay MGP_LPJ_T0098017.1 MGP_LPJ_G0036298.1 mouse_genomes_project 19 10660907 10661422 - pseudogene pseudogene MGP_LPJ_T0051743.1 MGP_LPJ_G0025094.1 mouse_genomes_project 19 43550046 43556973 - MGP_LPJ_P0051743 Bloc1s2 protein_coding protein_coding MGP_LPJ_T0013334.1 MGP_LPJ_G0011425.1 mouse_genomes_project 19 2360110 2360305 - processed_pseudogene processed_pseudogene MGP_LPJ_T0051742.1 MGP_LPJ_G0025093.1 mouse_genomes_project 19 43519632 43546801 - MGP_LPJ_P0051742 Cwf19l1 protein_coding protein_coding MGP_LPJ_T0051992.1 MGP_LPJ_G0025182.1 mouse_genomes_project 19 54121996 54125797 + MGP_LPJ_P0051992 Adra2a protein_coding protein_coding MGP_LPJ_T0100533.1 MGP_LPJ_G0038796.1 mouse_genomes_project 19 5885251 5885316 + Gm22744 snoRNA snoRNA MGP_LPJ_T0051381.1 MGP_LPJ_G0024965.1 mouse_genomes_project 19 30608587 30683713 - MGP_LPJ_P0051381 Asah2 protein_coding protein_coding MGP_LPJ_T0010300.1 MGP_LPJ_G0008418.1 mouse_genomes_project 19 3058770 3058829 + Mir6988 miRNA miRNA MGP_LPJ_T0051657.1 MGP_LPJ_G0025068.1 mouse_genomes_project 19 41394349 41427731 + MGP_LPJ_P0051657 Pi4k2a protein_coding protein_coding MGP_LPJ_T0013365.1 MGP_LPJ_G0011456.1 mouse_genomes_project 19 56987560 56987908 - processed_pseudogene processed_pseudogene MGP_LPJ_T0051115.1 MGP_LPJ_G0024857.1 mouse_genomes_project 19 10745994 10746933 + MGP_LPJ_P0051115 Olfr1461 protein_coding protein_coding MGP_LPJ_T0051088.1 MGP_LPJ_G0024838.1 mouse_genomes_project 19 10233053 10234118 + MGP_LPJ_P0051088 Olfr1442 protein_coding protein_coding MGP_LPJ_T0051076.1 MGP_LPJ_G0024833.1 mouse_genomes_project 19 9993104 9997607 + MGP_LPJ_P0051076 Mpeg1 protein_coding protein_coding MGP_LPJ_T0050904.1 MGP_LPJ_G0024760.1 mouse_genomes_project 19 7482904 7496887 + MGP_LPJ_P0050904 Fads1 protein_coding protein_coding MGP_LPJ_T0050304.1 MGP_LPJ_G0024584.1 mouse_genomes_project 19 1385947 1387741 - MGP_LPJ_P0050304 2010003K11Rik protein_coding protein_coding MGP_LPJ_T0100535.1 MGP_LPJ_G0038798.1 mouse_genomes_project 19 5885753 5885820 + Gm23246 snoRNA snoRNA MGP_LPJ_T0010325.1 MGP_LPJ_G0008443.1 mouse_genomes_project 19 33864644 33864718 + Mir1950 miRNA miRNA MGP_LPJ_T0051108.1 MGP_LPJ_G0024850.1 mouse_genomes_project 19 10538647 10539625 + MGP_LPJ_P0051108 Olfr1450 protein_coding protein_coding MGP_LPJ_T0098016.1 MGP_LPJ_G0036297.1 mouse_genomes_project 19 10602628 10603553 + pseudogene pseudogene MGP_LPJ_T0050706.1 MGP_LPJ_G0024697.1 mouse_genomes_project 19 3940499 3945625 - MGP_LPJ_P0050706 Vegfb protein_coding protein_coding MGP_LPJ_T0050707.1 MGP_LPJ_G0024697.1 mouse_genomes_project 19 3940499 3945603 - MGP_LPJ_P0050707 Vegfb protein_coding protein_coding MGP_LPJ_T0050708.1 MGP_LPJ_G0024697.1 mouse_genomes_project 19 3944367 3945114 - Vegfb protein_coding retained_intron MGP_LPJ_T0100530.1 MGP_LPJ_G0038793.1 mouse_genomes_project 19 5884410 5884485 + Gm25894 snoRNA snoRNA MGP_LPJ_T0007109.1 MGP_LPJ_G0005839.1 mouse_genomes_project 19 44807146 44819846 - Gm29595 lincRNA lincRNA MGP_LPJ_T0007110.1 MGP_LPJ_G0005839.1 mouse_genomes_project 19 44807155 44809705 - Gm29595 lincRNA lincRNA MGP_LPJ_T0051129.1 MGP_LPJ_G0024871.1 mouse_genomes_project 19 11306699 11307659 + MGP_LPJ_P0051129 Olfr1491 protein_coding protein_coding MGP_LPJ_T0017672.1 MGP_LPJ_G0015307.1 mouse_genomes_project 19 60340253 60344917 + Gm4219 processed_transcript processed_transcript MGP_LPJ_T0007097.1 MGP_LPJ_G0005829.1 mouse_genomes_project 19 31028530 31030498 + 2700046G09Rik lincRNA lincRNA MGP_LPJ_T0050858.1 MGP_LPJ_G0024738.1 mouse_genomes_project 19 6048715 6052806 + MGP_LPJ_P0050858 Ubxn1 protein_coding protein_coding MGP_LPJ_T0050859.1 MGP_LPJ_G0024738.1 mouse_genomes_project 19 6048799 6052814 + MGP_LPJ_P0050859 Ubxn1 protein_coding protein_coding MGP_LPJ_T0051887.1 MGP_LPJ_G0025142.1 mouse_genomes_project 19 46227510 46288636 + MGP_LPJ_P0051887 Wbp1l protein_coding protein_coding MGP_LPJ_T0051888.1 MGP_LPJ_G0025142.1 mouse_genomes_project 19 46227539 46288632 + MGP_LPJ_P0051888 Wbp1l protein_coding nonsense_mediated_decay MGP_LPJ_T0051889.1 MGP_LPJ_G0025142.1 mouse_genomes_project 19 46227540 46288629 + MGP_LPJ_P0051889 Wbp1l protein_coding protein_coding MGP_LPJ_T0051890.1 MGP_LPJ_G0025142.1 mouse_genomes_project 19 46227550 46276013 + Wbp1l protein_coding processed_transcript MGP_LPJ_T0051891.1 MGP_LPJ_G0025142.1 mouse_genomes_project 19 46254290 46283782 + Wbp1l protein_coding processed_transcript MGP_LPJ_T0051892.1 MGP_LPJ_G0025142.1 mouse_genomes_project 19 46254290 46288634 + MGP_LPJ_P0051892 Wbp1l protein_coding protein_coding MGP_LPJ_T0007133.1 MGP_LPJ_G0005855.1 mouse_genomes_project 19 60644876 60646604 + Gm28351 lincRNA lincRNA MGP_LPJ_T0050308.1 MGP_LPJ_G0024586.1 mouse_genomes_project 19 1507618 1511501 - MGP_LPJ_P0050308 Lrfn4 protein_coding protein_coding MGP_LPJ_T0050309.1 MGP_LPJ_G0024586.1 mouse_genomes_project 19 1507625 1511336 - MGP_LPJ_P0050309 Lrfn4 protein_coding protein_coding MGP_LPJ_T0010317.1 MGP_LPJ_G0008435.1 mouse_genomes_project 19 21229585 21229706 + Mir1192 miRNA miRNA MGP_LPJ_T0010327.1 MGP_LPJ_G0008445.1 mouse_genomes_project 19 38188457 38188521 - Gm23800 miRNA miRNA MGP_LPJ_T0010324.1 MGP_LPJ_G0008442.1 mouse_genomes_project 19 33709831 33709918 - Mir107 miRNA miRNA MGP_LPJ_T0100554.1 MGP_LPJ_G0038817.1 mouse_genomes_project 19 47425088 47425204 + Gm26085 snoRNA snoRNA MGP_LPJ_T0010312.1 MGP_LPJ_G0008430.1 mouse_genomes_project 19 7491391 7491456 + Mir6993 miRNA miRNA MGP_LPJ_T0051562.1 MGP_LPJ_G0025039.1 mouse_genomes_project 19 39458234 39511859 - MGP_LPJ_P0051562 Pdlim1 protein_coding protein_coding MGP_LPJ_T0051563.1 MGP_LPJ_G0025039.1 mouse_genomes_project 19 39459295 39511684 - MGP_LPJ_P0051563 Pdlim1 protein_coding unknown_likely_coding MGP_LPJ_T0051564.1 MGP_LPJ_G0025039.1 mouse_genomes_project 19 39459424 39460418 - Pdlim1 protein_coding retained_intron MGP_LPJ_T0051565.1 MGP_LPJ_G0025039.1 mouse_genomes_project 19 39459584 39469153 - Pdlim1 protein_coding retained_intron MGP_LPJ_T0051566.1 MGP_LPJ_G0025039.1 mouse_genomes_project 19 39468939 39512085 - MGP_LPJ_P0051566 Pdlim1 protein_coding protein_coding MGP_LPJ_T0051567.1 MGP_LPJ_G0025039.1 mouse_genomes_project 19 39486067 39511859 - Pdlim1 protein_coding retained_intron MGP_LPJ_T0007102.1 MGP_LPJ_G0005833.1 mouse_genomes_project 19 36214889 36238249 + A330032B11Rik lincRNA lincRNA MGP_LPJ_T0099290.1 MGP_LPJ_G0037553.1 mouse_genomes_project 19 13382927 13383034 + Gm24319 snRNA snRNA MGP_LPJ_T0050724.1 MGP_LPJ_G0024707.1 mouse_genomes_project 19 4197298 4213027 - MGP_LPJ_P0050724 Naa40 protein_coding protein_coding MGP_LPJ_T0050814.1 MGP_LPJ_G0024729.1 mouse_genomes_project 19 5919958 5933815 + MGP_LPJ_P0050814 Nxf1 protein_coding protein_coding MGP_LPJ_T0050815.1 MGP_LPJ_G0024729.1 mouse_genomes_project 19 5919992 5937426 + MGP_LPJ_P0050815 Nxf1 protein_coding protein_coding MGP_LPJ_T0050816.1 MGP_LPJ_G0024729.1 mouse_genomes_project 19 5920004 5930506 + Nxf1 protein_coding processed_transcript MGP_LPJ_T0050817.1 MGP_LPJ_G0024729.1 mouse_genomes_project 19 5920035 5928184 + MGP_LPJ_P0050817 Nxf1 protein_coding protein_coding MGP_LPJ_T0050818.1 MGP_LPJ_G0024729.1 mouse_genomes_project 19 5920035 5926632 + MGP_LPJ_P0050818 Nxf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0050819.1 MGP_LPJ_G0024729.1 mouse_genomes_project 19 5927826 5930289 + MGP_LPJ_P0050819 Nxf1 protein_coding protein_coding MGP_LPJ_T0050820.1 MGP_LPJ_G0024729.1 mouse_genomes_project 19 5928283 5936056 + MGP_LPJ_P0050820 Nxf1 protein_coding unknown_likely_coding MGP_LPJ_T0050821.1 MGP_LPJ_G0024729.1 mouse_genomes_project 19 5929569 5932060 + Nxf1 protein_coding retained_intron MGP_LPJ_T0050822.1 MGP_LPJ_G0024729.1 mouse_genomes_project 19 5929903 5930780 + Nxf1 protein_coding retained_intron MGP_LPJ_T0050823.1 MGP_LPJ_G0024729.1 mouse_genomes_project 19 5931527 5933742 + MGP_LPJ_P0050823 Nxf1 protein_coding protein_coding MGP_LPJ_T0050824.1 MGP_LPJ_G0024729.1 mouse_genomes_project 19 5932984 5933814 + Nxf1 protein_coding processed_transcript MGP_LPJ_T0050825.1 MGP_LPJ_G0024729.1 mouse_genomes_project 19 5933028 5933755 + Nxf1 protein_coding retained_intron MGP_LPJ_T0051724.1 MGP_LPJ_G0025090.1 mouse_genomes_project 19 43409430 43437822 - MGP_LPJ_P0051724 Cyp2c44 protein_coding protein_coding MGP_LPJ_T0050334.1 MGP_LPJ_G0024596.1 mouse_genomes_project 19 1765820 1771604 + MGP_LPJ_P0050334 Ctsf protein_coding protein_coding MGP_LPJ_T0051615.1 MGP_LPJ_G0025055.1 mouse_genomes_project 19 40876767 41025210 - MGP_LPJ_P0051615 Slit1 protein_coding protein_coding MGP_LPJ_T0051616.1 MGP_LPJ_G0025055.1 mouse_genomes_project 19 40876769 41025383 - MGP_LPJ_P0051616 Slit1 protein_coding protein_coding MGP_LPJ_T0051617.1 MGP_LPJ_G0025055.1 mouse_genomes_project 19 40876961 41025210 - MGP_LPJ_P0051617 Slit1 protein_coding protein_coding MGP_LPJ_T0051618.1 MGP_LPJ_G0025055.1 mouse_genomes_project 19 40882825 40888059 - Slit1 protein_coding retained_intron MGP_LPJ_T0051619.1 MGP_LPJ_G0025055.1 mouse_genomes_project 19 40925483 41025204 - MGP_LPJ_P0051619 Slit1 protein_coding protein_coding MGP_LPJ_T0098219.1 MGP_LPJ_G0036500.1 mouse_genomes_project 19 4233807 4233928 + Gm23997 rRNA rRNA MGP_LPJ_T0050875.1 MGP_LPJ_G0024747.1 mouse_genomes_project 19 6126296 6136304 + MGP_LPJ_P0050875 Mta2 protein_coding protein_coding MGP_LPJ_T0050876.1 MGP_LPJ_G0024747.1 mouse_genomes_project 19 6126914 6130295 + Mta2 protein_coding processed_transcript MGP_LPJ_T0050877.1 MGP_LPJ_G0024747.1 mouse_genomes_project 19 6126927 6131149 + Mta2 protein_coding processed_transcript MGP_LPJ_T0050878.1 MGP_LPJ_G0024747.1 mouse_genomes_project 19 6128455 6131542 + Mta2 protein_coding retained_intron MGP_LPJ_T0050879.1 MGP_LPJ_G0024747.1 mouse_genomes_project 19 6129516 6131170 + Mta2 protein_coding processed_transcript MGP_LPJ_T0050880.1 MGP_LPJ_G0024747.1 mouse_genomes_project 19 6130821 6132104 + Mta2 protein_coding retained_intron MGP_LPJ_T0050788.1 MGP_LPJ_G0024725.1 mouse_genomes_project 19 5865116 5882697 - MGP_LPJ_P0050788 Slc3a2 protein_coding protein_coding MGP_LPJ_T0050789.1 MGP_LPJ_G0024725.1 mouse_genomes_project 19 5866858 5870906 - MGP_LPJ_P0050789 Slc3a2 protein_coding protein_coding MGP_LPJ_T0050790.1 MGP_LPJ_G0024725.1 mouse_genomes_project 19 5867284 5870907 - MGP_LPJ_P0050790 Slc3a2 protein_coding protein_coding MGP_LPJ_T0050791.1 MGP_LPJ_G0024725.1 mouse_genomes_project 19 5867316 5871984 - MGP_LPJ_P0050791 Slc3a2 protein_coding protein_coding MGP_LPJ_T0050792.1 MGP_LPJ_G0024725.1 mouse_genomes_project 19 5870706 5882800 - Slc3a2 protein_coding retained_intron MGP_LPJ_T0050793.1 MGP_LPJ_G0024725.1 mouse_genomes_project 19 5870959 5871647 - MGP_LPJ_P0050793 Slc3a2 protein_coding protein_coding MGP_LPJ_T0050794.1 MGP_LPJ_G0024725.1 mouse_genomes_project 19 5870970 5871734 - MGP_LPJ_P0050794 Slc3a2 protein_coding protein_coding MGP_LPJ_T0051620.1 MGP_LPJ_G0025056.1 mouse_genomes_project 19 41048452 41084767 - MGP_LPJ_P0051620 Arhgap19 protein_coding protein_coding MGP_LPJ_T0051621.1 MGP_LPJ_G0025056.1 mouse_genomes_project 19 41048455 41084804 - MGP_LPJ_P0051621 Arhgap19 protein_coding protein_coding MGP_LPJ_T0051622.1 MGP_LPJ_G0025056.1 mouse_genomes_project 19 41051664 41063520 - MGP_LPJ_P0051622 Arhgap19 protein_coding protein_coding MGP_LPJ_T0051623.1 MGP_LPJ_G0025056.1 mouse_genomes_project 19 41051858 41084767 - MGP_LPJ_P0051623 Arhgap19 protein_coding protein_coding MGP_LPJ_T0050718.1 MGP_LPJ_G0024705.1 mouse_genomes_project 19 4169678 4185789 - MGP_LPJ_P0050718 Otub1 protein_coding unknown_likely_coding MGP_LPJ_T0050719.1 MGP_LPJ_G0024705.1 mouse_genomes_project 19 4169683 4177534 - MGP_LPJ_P0050719 Otub1 protein_coding protein_coding MGP_LPJ_T0050720.1 MGP_LPJ_G0024705.1 mouse_genomes_project 19 4171025 4171950 - Otub1 protein_coding retained_intron MGP_LPJ_T0050721.1 MGP_LPJ_G0024705.1 mouse_genomes_project 19 4171196 4177075 - MGP_LPJ_P0050721 Otub1 protein_coding protein_coding MGP_LPJ_T0050722.1 MGP_LPJ_G0024705.1 mouse_genomes_project 19 4171226 4175719 - Otub1 protein_coding retained_intron MGP_LPJ_T0051650.1 MGP_LPJ_G0025064.1 mouse_genomes_project 19 41339436 41348547 + MGP_LPJ_P0051650 Ankrd2 protein_coding protein_coding MGP_LPJ_T0051106.1 MGP_LPJ_G0024848.1 mouse_genomes_project 19 10502898 10503843 - MGP_LPJ_P0051106 Olfr1448 protein_coding protein_coding MGP_LPJ_T0051157.1 MGP_LPJ_G0024889.1 mouse_genomes_project 19 14640904 14642419 - MGP_LPJ_P0051157 Foxb2 protein_coding protein_coding MGP_LPJ_T0050322.1 MGP_LPJ_G0024592.1 mouse_genomes_project 19 1687014 1697432 - MGP_LPJ_P0050322 protein_coding protein_coding MGP_LPJ_T0050326.1 MGP_LPJ_G0024592.1 mouse_genomes_project 19 1692789 1697414 - protein_coding retained_intron MGP_LPJ_T0050197.1 MGP_LPJ_G0024560.1 mouse_genomes_project 19 826429 826945 - Ndufv1 protein_coding retained_intron MGP_LPJ_T0050198.1 MGP_LPJ_G0024560.1 mouse_genomes_project 19 826430 831549 - MGP_LPJ_P0050198 Ndufv1 protein_coding protein_coding MGP_LPJ_T0050199.1 MGP_LPJ_G0024560.1 mouse_genomes_project 19 826488 831600 - MGP_LPJ_P0050199 Ndufv1 protein_coding protein_coding MGP_LPJ_T0050200.1 MGP_LPJ_G0024560.1 mouse_genomes_project 19 827221 828774 - Ndufv1 protein_coding retained_intron MGP_LPJ_T0050201.1 MGP_LPJ_G0024560.1 mouse_genomes_project 19 827291 828067 - Ndufv1 protein_coding retained_intron MGP_LPJ_T0050202.1 MGP_LPJ_G0024560.1 mouse_genomes_project 19 827679 831631 - Ndufv1 protein_coding retained_intron MGP_LPJ_T0050203.1 MGP_LPJ_G0024560.1 mouse_genomes_project 19 828293 831635 - MGP_LPJ_P0050203 Ndufv1 protein_coding protein_coding MGP_LPJ_T0050204.1 MGP_LPJ_G0024560.1 mouse_genomes_project 19 828344 831592 - MGP_LPJ_P0050204 Ndufv1 protein_coding nonsense_mediated_decay MGP_LPJ_T0050205.1 MGP_LPJ_G0024560.1 mouse_genomes_project 19 828388 831686 - MGP_LPJ_P0050205 Ndufv1 protein_coding protein_coding MGP_LPJ_T0050206.1 MGP_LPJ_G0024560.1 mouse_genomes_project 19 828927 831588 - Ndufv1 protein_coding retained_intron MGP_LPJ_T0098224.1 MGP_LPJ_G0036505.1 mouse_genomes_project 19 48007880 48007991 - Gm23857 rRNA rRNA MGP_LPJ_T0050129.1 MGP_LPJ_G0024546.1 mouse_genomes_project 19 348454 469071 - MGP_LPJ_P0050129 Lrp5 protein_coding protein_coding MGP_LPJ_T0050130.1 MGP_LPJ_G0024546.1 mouse_genomes_project 19 348457 469076 - MGP_LPJ_P0050130 Lrp5 protein_coding nonsense_mediated_decay MGP_LPJ_T0050131.1 MGP_LPJ_G0024546.1 mouse_genomes_project 19 348462 381748 - MGP_LPJ_P0050131 Lrp5 protein_coding nonsense_mediated_decay MGP_LPJ_T0050132.1 MGP_LPJ_G0024546.1 mouse_genomes_project 19 387618 469079 - MGP_LPJ_P0050132 Lrp5 protein_coding protein_coding MGP_LPJ_T0052129.1 MGP_LPJ_G0025222.1 mouse_genomes_project 19 60943717 61002277 - MGP_LPJ_P0052129 Cacul1 protein_coding protein_coding MGP_LPJ_T0052130.1 MGP_LPJ_G0025222.1 mouse_genomes_project 19 60943717 61002277 - MGP_LPJ_P0052130 Cacul1 protein_coding protein_coding MGP_LPJ_T0052131.1 MGP_LPJ_G0025222.1 mouse_genomes_project 19 60943717 61002277 - MGP_LPJ_P0052131 Cacul1 protein_coding protein_coding MGP_LPJ_T0051499.1 MGP_LPJ_G0025013.1 mouse_genomes_project 19 37002644 37155576 - MGP_LPJ_P0051499 Myof protein_coding protein_coding MGP_LPJ_T0051500.1 MGP_LPJ_G0025013.1 mouse_genomes_project 19 37002644 37155576 - MGP_LPJ_P0051500 Myof protein_coding protein_coding MGP_LPJ_T0051501.1 MGP_LPJ_G0025013.1 mouse_genomes_project 19 37003337 37155320 - MGP_LPJ_P0051501 Myof protein_coding unknown_likely_coding MGP_LPJ_T0051660.1 MGP_LPJ_G0025070.1 mouse_genomes_project 19 41456560 41460872 + MGP_LPJ_P0051660 Marveld1 protein_coding protein_coding MGP_LPJ_T0051661.1 MGP_LPJ_G0025070.1 mouse_genomes_project 19 41456877 41460631 + MGP_LPJ_P0051661 Marveld1 protein_coding protein_coding MGP_LPJ_T0051253.1 MGP_LPJ_G0024932.1 mouse_genomes_project 19 24905467 25101443 + MGP_LPJ_P0051253 Smarca2 protein_coding protein_coding MGP_LPJ_T0051254.1 MGP_LPJ_G0024932.1 mouse_genomes_project 19 24905471 25101397 + MGP_LPJ_P0051254 Smarca2 protein_coding protein_coding MGP_LPJ_T0051255.1 MGP_LPJ_G0024932.1 mouse_genomes_project 19 24909471 25101395 + MGP_LPJ_P0051255 Smarca2 protein_coding nonsense_mediated_decay MGP_LPJ_T0051256.1 MGP_LPJ_G0024932.1 mouse_genomes_project 19 24909551 25101448 + MGP_LPJ_P0051256 Smarca2 protein_coding unknown_likely_coding MGP_LPJ_T0051257.1 MGP_LPJ_G0024932.1 mouse_genomes_project 19 24924687 25100504 + MGP_LPJ_P0051257 Smarca2 protein_coding protein_coding MGP_LPJ_T0051258.1 MGP_LPJ_G0024932.1 mouse_genomes_project 19 24928412 24936029 + MGP_LPJ_P0051258 Smarca2 protein_coding protein_coding MGP_LPJ_T0051259.1 MGP_LPJ_G0024932.1 mouse_genomes_project 19 24981562 24988438 + Smarca2 protein_coding retained_intron MGP_LPJ_T0051260.1 MGP_LPJ_G0024932.1 mouse_genomes_project 19 24990891 25073937 + Smarca2 protein_coding processed_transcript MGP_LPJ_T0051261.1 MGP_LPJ_G0024932.1 mouse_genomes_project 19 25030890 25094893 + Smarca2 protein_coding retained_intron MGP_LPJ_T0051262.1 MGP_LPJ_G0024932.1 mouse_genomes_project 19 25036711 25073977 + Smarca2 protein_coding processed_transcript MGP_LPJ_T0051263.1 MGP_LPJ_G0024932.1 mouse_genomes_project 19 25066603 25100610 + MGP_LPJ_P0051263 Smarca2 protein_coding protein_coding MGP_LPJ_T0051264.1 MGP_LPJ_G0024932.1 mouse_genomes_project 19 25066758 25100504 + MGP_LPJ_P0051264 Smarca2 protein_coding protein_coding MGP_LPJ_T0051265.1 MGP_LPJ_G0024932.1 mouse_genomes_project 19 25066793 25099376 + MGP_LPJ_P0051265 Smarca2 protein_coding protein_coding MGP_LPJ_T0051266.1 MGP_LPJ_G0024932.1 mouse_genomes_project 19 25066794 25100504 + MGP_LPJ_P0051266 Smarca2 protein_coding protein_coding MGP_LPJ_T0051267.1 MGP_LPJ_G0024932.1 mouse_genomes_project 19 25066794 25101395 + MGP_LPJ_P0051267 Smarca2 protein_coding protein_coding MGP_LPJ_T0051268.1 MGP_LPJ_G0024932.1 mouse_genomes_project 19 25070691 25097440 + MGP_LPJ_P0051268 Smarca2 protein_coding protein_coding MGP_LPJ_T0051269.1 MGP_LPJ_G0024932.1 mouse_genomes_project 19 25072945 25094135 + MGP_LPJ_P0051269 Smarca2 protein_coding protein_coding MGP_LPJ_T0051270.1 MGP_LPJ_G0024932.1 mouse_genomes_project 19 25073949 25101443 + MGP_LPJ_P0051270 Smarca2 protein_coding nonsense_mediated_decay MGP_LPJ_T0051271.1 MGP_LPJ_G0024932.1 mouse_genomes_project 19 25075602 25100773 + MGP_LPJ_P0051271 Smarca2 protein_coding protein_coding MGP_LPJ_T0051272.1 MGP_LPJ_G0024932.1 mouse_genomes_project 19 25093626 25100566 + MGP_LPJ_P0051272 Smarca2 protein_coding protein_coding MGP_LPJ_T0051649.1 MGP_LPJ_G0025063.1 mouse_genomes_project 19 41279350 41338040 + MGP_LPJ_P0051649 Ubtd1 protein_coding protein_coding MGP_LPJ_T0050133.1 MGP_LPJ_G0024547.1 mouse_genomes_project 19 490923 500472 + MGP_LPJ_P0050133 1810055G02Rik protein_coding protein_coding MGP_LPJ_T0051714.1 MGP_LPJ_G0025087.1 mouse_genomes_project 19 43169345 43232669 + MGP_LPJ_P0051714 Abcc2 protein_coding protein_coding MGP_LPJ_T0051715.1 MGP_LPJ_G0025087.1 mouse_genomes_project 19 43169479 43171791 + Abcc2 protein_coding retained_intron MGP_LPJ_T0051716.1 MGP_LPJ_G0025087.1 mouse_genomes_project 19 43169557 43218028 + MGP_LPJ_P0051716 Abcc2 protein_coding unknown_likely_coding MGP_LPJ_T0051717.1 MGP_LPJ_G0025087.1 mouse_genomes_project 19 43186116 43188900 + Abcc2 protein_coding retained_intron MGP_LPJ_T0051718.1 MGP_LPJ_G0025087.1 mouse_genomes_project 19 43199538 43202418 + Abcc2 protein_coding retained_intron MGP_LPJ_T0051719.1 MGP_LPJ_G0025087.1 mouse_genomes_project 19 43230736 43232657 + MGP_LPJ_P0051719 Abcc2 protein_coding protein_coding MGP_LPJ_T0007121.1 MGP_LPJ_G0005847.1 mouse_genomes_project 19 53450564 53475809 - Mirt1 lincRNA lincRNA MGP_LPJ_T0007122.1 MGP_LPJ_G0005847.1 mouse_genomes_project 19 53453309 53456610 - Mirt1 lincRNA lincRNA MGP_LPJ_T0007123.1 MGP_LPJ_G0005847.1 mouse_genomes_project 19 53460944 53463398 - Mirt1 lincRNA lincRNA MGP_LPJ_T0007067.1 MGP_LPJ_G0005811.1 mouse_genomes_project 19 2759253 2766267 - Malat1 lincRNA lincRNA MGP_LPJ_T0007068.1 MGP_LPJ_G0005811.1 mouse_genomes_project 19 2759254 2761028 - Malat1 lincRNA lincRNA MGP_LPJ_T0007069.1 MGP_LPJ_G0005811.1 mouse_genomes_project 19 2759257 2760516 - Malat1 lincRNA lincRNA MGP_LPJ_T0007070.1 MGP_LPJ_G0005811.1 mouse_genomes_project 19 2765479 2766266 - Malat1 lincRNA lincRNA MGP_LPJ_T0007071.1 MGP_LPJ_G0005811.1 mouse_genomes_project 19 2765506 2766235 - Malat1 lincRNA lincRNA MGP_LPJ_T0050541.1 MGP_LPJ_G0024666.1 mouse_genomes_project 19 3092429 3099224 + MGP_LPJ_P0050541 Cdca5 protein_coding protein_coding MGP_LPJ_T0050542.1 MGP_LPJ_G0024666.1 mouse_genomes_project 19 3093197 3099224 + Cdca5 protein_coding processed_transcript MGP_LPJ_T0050543.1 MGP_LPJ_G0024666.1 mouse_genomes_project 19 3093273 3099224 + Cdca5 protein_coding processed_transcript MGP_LPJ_T0101301.1 MGP_LPJ_G0039523.1 mouse_genomes_project 19 10414405 10415148 + transcribed_processed_pseudogene processed_transcript MGP_LPJ_T0101302.1 MGP_LPJ_G0039523.1 mouse_genomes_project 19 10414589 10414928 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_LPJ_T0051452.1 MGP_LPJ_G0024999.1 mouse_genomes_project 19 35338757 35420736 + MGP_LPJ_P0051452 Pcgf5 protein_coding protein_coding MGP_LPJ_T0051453.1 MGP_LPJ_G0024999.1 mouse_genomes_project 19 35369635 35420736 + MGP_LPJ_P0051453 Pcgf5 protein_coding protein_coding MGP_LPJ_T0051075.1 MGP_LPJ_G0024832.1 mouse_genomes_project 19 9967219 9971425 + MGP_LPJ_P0051075 Pfpl protein_coding protein_coding MGP_LPJ_T0050927.1 MGP_LPJ_G0024767.1 mouse_genomes_project 19 7783778 7791891 - MGP_LPJ_P0050927 Ppp1r32 protein_coding unknown_likely_coding MGP_LPJ_T0051537.1 MGP_LPJ_G0025025.1 mouse_genomes_project 19 38188450 38230141 + MGP_LPJ_P0051537 Cyp2c55 protein_coding protein_coding MGP_LPJ_T0051538.1 MGP_LPJ_G0025025.1 mouse_genomes_project 19 38188477 38229641 + MGP_LPJ_P0051538 Cyp2c55 protein_coding unknown_likely_coding MGP_LPJ_T0010320.1 MGP_LPJ_G0008438.1 mouse_genomes_project 19 28768102 28768179 - Gm24108 miRNA miRNA MGP_LPJ_T0051463.1 MGP_LPJ_G0025002.1 mouse_genomes_project 19 35838435 35906704 + MGP_LPJ_P0051463 Tnks2 protein_coding protein_coding MGP_LPJ_T0051464.1 MGP_LPJ_G0025002.1 mouse_genomes_project 19 35838607 35861174 + Tnks2 protein_coding processed_transcript MGP_LPJ_T0051465.1 MGP_LPJ_G0025002.1 mouse_genomes_project 19 35853419 35860229 + Tnks2 protein_coding retained_intron MGP_LPJ_T0051466.1 MGP_LPJ_G0025002.1 mouse_genomes_project 19 35862743 35867566 + Tnks2 protein_coding retained_intron MGP_LPJ_T0051467.1 MGP_LPJ_G0025002.1 mouse_genomes_project 19 35863126 35882885 + MGP_LPJ_P0051467 Tnks2 protein_coding protein_coding MGP_LPJ_T0051468.1 MGP_LPJ_G0025002.1 mouse_genomes_project 19 35864339 35874040 + MGP_LPJ_P0051468 Tnks2 protein_coding protein_coding MGP_LPJ_T0051469.1 MGP_LPJ_G0025002.1 mouse_genomes_project 19 35882172 35897352 + MGP_LPJ_P0051469 Tnks2 protein_coding protein_coding MGP_LPJ_T0051470.1 MGP_LPJ_G0025002.1 mouse_genomes_project 19 35891775 35896350 + Tnks2 protein_coding retained_intron MGP_LPJ_T0051471.1 MGP_LPJ_G0025002.1 mouse_genomes_project 19 35893841 35900643 + Tnks2 protein_coding retained_intron MGP_LPJ_T0050189.1 MGP_LPJ_G0024557.1 mouse_genomes_project 19 810270 818486 + MGP_LPJ_P0050189 Tbx10 protein_coding protein_coding MGP_LPJ_T0050938.1 MGP_LPJ_G0024773.1 mouse_genomes_project 19 7905562 7917621 - MGP_LPJ_P0050938 Tkfc protein_coding protein_coding MGP_LPJ_T0052000.1 MGP_LPJ_G0025185.1 mouse_genomes_project 19 55336636 55381546 - MGP_LPJ_P0052000 Gucy2g protein_coding protein_coding MGP_LPJ_T0050436.1 MGP_LPJ_G0024638.1 mouse_genomes_project 19 2596850 2607498 + MGP_LPJ_P0050436 Rela protein_coding protein_coding MGP_LPJ_T0050578.1 MGP_LPJ_G0024677.1 mouse_genomes_project 19 3320819 3340095 + MGP_LPJ_P0050578 Cdc42bpg protein_coding protein_coding MGP_LPJ_T0050579.1 MGP_LPJ_G0024677.1 mouse_genomes_project 19 3336250 3336675 + Cdc42bpg protein_coding retained_intron MGP_LPJ_T0050454.1 MGP_LPJ_G0024642.1 mouse_genomes_project 19 2664725 2667460 + MGP_LPJ_P0050454 Kcnk7 protein_coding protein_coding MGP_LPJ_T0010295.1 MGP_LPJ_G0008413.1 mouse_genomes_project 19 1052893 1052980 - Gm26115 miRNA miRNA MGP_LPJ_T0050501.1 MGP_LPJ_G0024659.1 mouse_genomes_project 19 3065386 3066953 + MGP_LPJ_P0050501 Gm9843 protein_coding protein_coding MGP_LPJ_T0007072.1 MGP_LPJ_G0005812.1 mouse_genomes_project 19 2788519 2810649 - Neat1 lincRNA lincRNA MGP_LPJ_T0007073.1 MGP_LPJ_G0005812.1 mouse_genomes_project 19 2807477 2810647 - Neat1 lincRNA lincRNA MGP_LPJ_T0007074.1 MGP_LPJ_G0005812.1 mouse_genomes_project 19 2808851 2810430 - Neat1 lincRNA lincRNA MGP_LPJ_T0051098.1 MGP_LPJ_G0024842.1 mouse_genomes_project 19 10327335 10329308 - MGP_LPJ_P0051098 Cntf protein_coding protein_coding MGP_LPJ_T0013342.1 MGP_LPJ_G0011433.1 mouse_genomes_project 19 9094490 9095283 - processed_pseudogene processed_pseudogene MGP_LPJ_T0050775.1 MGP_LPJ_G0024719.1 mouse_genomes_project 19 4892720 4987150 - MGP_LPJ_P0050775 protein_coding protein_coding MGP_LPJ_T0050778.1 MGP_LPJ_G0024719.1 mouse_genomes_project 19 4892854 4917473 - protein_coding processed_transcript MGP_LPJ_T0050779.1 MGP_LPJ_G0024719.1 mouse_genomes_project 19 4892859 4987151 - MGP_LPJ_P0050779 protein_coding nonsense_mediated_decay MGP_LPJ_T0050780.1 MGP_LPJ_G0024719.1 mouse_genomes_project 19 4893029 4987090 - MGP_LPJ_P0050780 protein_coding nonsense_mediated_decay MGP_LPJ_T0050685.1 MGP_LPJ_G0024689.1 mouse_genomes_project 19 3863465 3874096 - MGP_LPJ_P0050685 Esrra protein_coding protein_coding MGP_LPJ_T0050686.1 MGP_LPJ_G0024689.1 mouse_genomes_project 19 3864940 3874049 - MGP_LPJ_P0050686 Esrra protein_coding protein_coding MGP_LPJ_T0050687.1 MGP_LPJ_G0024689.1 mouse_genomes_project 19 3865253 3874101 - Esrra protein_coding processed_transcript MGP_LPJ_T0050688.1 MGP_LPJ_G0024689.1 mouse_genomes_project 19 3872192 3874055 - Esrra protein_coding retained_intron MGP_LPJ_T0050689.1 MGP_LPJ_G0024689.1 mouse_genomes_project 19 3872366 3873339 - MGP_LPJ_P0050689 Esrra protein_coding protein_coding MGP_LPJ_T0050747.1 MGP_LPJ_G0024710.1 mouse_genomes_project 19 4333642 4363143 - MGP_LPJ_P0050747 AI846148 protein_coding protein_coding MGP_LPJ_T0051933.1 MGP_LPJ_G0025161.1 mouse_genomes_project 19 47356070 47405688 - MGP_LPJ_P0051933 Col17a1 protein_coding protein_coding MGP_LPJ_T0051934.1 MGP_LPJ_G0025161.1 mouse_genomes_project 19 47356070 47405688 - MGP_LPJ_P0051934 Col17a1 protein_coding protein_coding MGP_LPJ_T0051935.1 MGP_LPJ_G0025161.1 mouse_genomes_project 19 47357826 47359322 - Col17a1 protein_coding processed_transcript MGP_LPJ_T0051936.1 MGP_LPJ_G0025161.1 mouse_genomes_project 19 47382974 47384665 - Col17a1 protein_coding processed_transcript MGP_LPJ_T0051614.1 MGP_LPJ_G0025054.1 mouse_genomes_project 19 40868739 40872679 + MGP_LPJ_P0051614 AI606181 protein_coding protein_coding MGP_LPJ_T0099307.1 MGP_LPJ_G0037570.1 mouse_genomes_project 19 53139905 53140012 - Gm24724 snRNA snRNA MGP_LPJ_T0051765.1 MGP_LPJ_G0025104.1 mouse_genomes_project 19 43999564 44000669 + Hif1an protein_coding retained_intron MGP_LPJ_T0051766.1 MGP_LPJ_G0025104.1 mouse_genomes_project 19 43999564 44012978 + MGP_LPJ_P0051766 Hif1an protein_coding protein_coding MGP_LPJ_T0051070.1 MGP_LPJ_G0024827.1 mouse_genomes_project 19 9777947 9782082 + MGP_LPJ_P0051070 Olfr1434 protein_coding protein_coding MGP_LPJ_T0050702.1 MGP_LPJ_G0024694.1 mouse_genomes_project 19 3907153 3926072 - MGP_LPJ_P0050702 Plcb3 protein_coding protein_coding MGP_LPJ_T0051150.1 MGP_LPJ_G0024885.1 mouse_genomes_project 19 13656313 13688242 - MGP_LPJ_P0051150 Cep78 protein_coding protein_coding MGP_LPJ_T0099294.1 MGP_LPJ_G0037557.1 mouse_genomes_project 19 23688765 23688869 - Gm26207 snRNA snRNA MGP_LPJ_T0051117.1 MGP_LPJ_G0024859.1 mouse_genomes_project 19 10811047 10811980 + MGP_LPJ_P0051117 Olfr1463 protein_coding protein_coding MGP_LPJ_T0050944.1 MGP_LPJ_G0024778.1 mouse_genomes_project 19 8037698 8058550 - MGP_LPJ_P0050944 Cd5 protein_coding protein_coding MGP_LPJ_T0050499.1 MGP_LPJ_G0024658.1 mouse_genomes_project 19 3065324 3066961 + MGP_LPJ_P0050499 Fau protein_coding protein_coding MGP_LPJ_T0050500.1 MGP_LPJ_G0024658.1 mouse_genomes_project 19 3065324 3066961 + MGP_LPJ_P0050500 Fau protein_coding protein_coding MGP_LPJ_T0050502.1 MGP_LPJ_G0024658.1 mouse_genomes_project 19 3065403 3066961 + MGP_LPJ_P0050502 Fau protein_coding protein_coding MGP_LPJ_T0051020.1 MGP_LPJ_G0024802.1 mouse_genomes_project 19 8821004 8836978 + MGP_LPJ_P0051020 Ms4a6c protein_coding protein_coding MGP_LPJ_T0051021.1 MGP_LPJ_G0024802.1 mouse_genomes_project 19 8821063 8824390 + Ms4a6c protein_coding retained_intron MGP_LPJ_T0051155.1 MGP_LPJ_G0024888.1 mouse_genomes_project 19 14364170 14544043 - MGP_LPJ_P0051155 Vps13a protein_coding protein_coding MGP_LPJ_T0051156.1 MGP_LPJ_G0024888.1 mouse_genomes_project 19 14380697 14543990 - MGP_LPJ_P0051156 Vps13a protein_coding unknown_likely_coding MGP_LPJ_T0001050.1 MGP_LPJ_G0000975.1 mouse_genomes_project 19 36504489 36506237 - TEC TEC MGP_LPJ_T0050545.1 MGP_LPJ_G0024668.1 mouse_genomes_project 19 3123207 3125790 - MGP_LPJ_P0050545 Sac3d1 protein_coding protein_coding MGP_LPJ_T0051072.1 MGP_LPJ_G0024829.1 mouse_genomes_project 19 9837917 9848588 - MGP_LPJ_P0051072 Olfr1437 protein_coding protein_coding MGP_LPJ_T0051128.1 MGP_LPJ_G0024870.1 mouse_genomes_project 19 11261346 11262297 + MGP_LPJ_P0051128 Olfr1490 protein_coding protein_coding MGP_LPJ_T0050574.1 MGP_LPJ_G0024676.1 mouse_genomes_project 19 3291322 3314451 + MGP_LPJ_P0050574 Ehd1 protein_coding protein_coding MGP_LPJ_T0050575.1 MGP_LPJ_G0024676.1 mouse_genomes_project 19 3291522 3295990 + Ehd1 protein_coding retained_intron MGP_LPJ_T0050576.1 MGP_LPJ_G0024676.1 mouse_genomes_project 19 3308646 3312232 + Ehd1 protein_coding retained_intron MGP_LPJ_T0050577.1 MGP_LPJ_G0024676.1 mouse_genomes_project 19 3312268 3312715 + Ehd1 protein_coding processed_transcript MGP_LPJ_T0051066.1 MGP_LPJ_G0024823.1 mouse_genomes_project 19 9577651 9578596 - MGP_LPJ_P0051066 Olfr1428 protein_coding protein_coding MGP_LPJ_T0050380.1 MGP_LPJ_G0024617.1 mouse_genomes_project 19 2273797 2282208 + MGP_LPJ_P0050380 Catsper1 protein_coding protein_coding MGP_LPJ_T0051111.1 MGP_LPJ_G0024853.1 mouse_genomes_project 19 10645336 10646260 + MGP_LPJ_P0051111 Olfr1454 protein_coding protein_coding MGP_LPJ_T0051600.1 MGP_LPJ_G0025045.1 mouse_genomes_project 19 40162981 40187385 + MGP_LPJ_P0051600 Zfp518a protein_coding protein_coding MGP_LPJ_T0051412.1 MGP_LPJ_G0024977.1 mouse_genomes_project 19 32778194 32793796 + MGP_LPJ_P0051412 Lipf protein_coding protein_coding MGP_LPJ_T0007101.1 MGP_LPJ_G0005832.1 mouse_genomes_project 19 34781606 34871228 - A830019P07Rik lincRNA lincRNA MGP_LPJ_T0051462.1 MGP_LPJ_G0025001.1 mouse_genomes_project 19 35720408 35725325 - MGP_LPJ_P0051462 Ppp1r3c protein_coding protein_coding MGP_LPJ_T0051180.1 MGP_LPJ_G0024898.1 mouse_genomes_project 19 16606555 16756743 + MGP_LPJ_P0051180 Trpm6 protein_coding protein_coding MGP_LPJ_T0050353.1 MGP_LPJ_G0024603.1 mouse_genomes_project 19 1901434 1907051 - MGP_LPJ_P0050353 Npas4 protein_coding protein_coding MGP_LPJ_T0051053.1 MGP_LPJ_G0024812.1 mouse_genomes_project 19 9138457 9154847 + MGP_LPJ_P0051053 Gif protein_coding protein_coding MGP_LPJ_T0007086.1 MGP_LPJ_G0005823.1 mouse_genomes_project 19 21213234 21214052 + 2410080I02Rik lincRNA lincRNA MGP_LPJ_T0052095.1 MGP_LPJ_G0025205.1 mouse_genomes_project 19 58561711 58788868 - MGP_LPJ_P0052095 Gfra1 protein_coding protein_coding MGP_LPJ_T0052096.1 MGP_LPJ_G0025205.1 mouse_genomes_project 19 58561719 58788062 - MGP_LPJ_P0052096 Gfra1 protein_coding protein_coding MGP_LPJ_T0052097.1 MGP_LPJ_G0025205.1 mouse_genomes_project 19 58562799 58787936 - MGP_LPJ_P0052097 Gfra1 protein_coding protein_coding MGP_LPJ_T0052098.1 MGP_LPJ_G0025205.1 mouse_genomes_project 19 58564264 58788829 - MGP_LPJ_P0052098 Gfra1 protein_coding nonsense_mediated_decay MGP_LPJ_T0052099.1 MGP_LPJ_G0025205.1 mouse_genomes_project 19 58564264 58788771 - MGP_LPJ_P0052099 Gfra1 protein_coding protein_coding MGP_LPJ_T0052100.1 MGP_LPJ_G0025205.1 mouse_genomes_project 19 58786805 58788476 - MGP_LPJ_P0052100 Gfra1 protein_coding protein_coding MGP_LPJ_T0052101.1 MGP_LPJ_G0025205.1 mouse_genomes_project 19 58786822 58789379 - MGP_LPJ_P0052101 Gfra1 protein_coding protein_coding MGP_LPJ_T0052102.1 MGP_LPJ_G0025205.1 mouse_genomes_project 19 58786891 58788090 - MGP_LPJ_P0052102 Gfra1 protein_coding protein_coding MGP_LPJ_T0052103.1 MGP_LPJ_G0025205.1 mouse_genomes_project 19 58787793 58788631 - MGP_LPJ_P0052103 Gfra1 protein_coding protein_coding MGP_LPJ_T0013335.1 MGP_LPJ_G0011426.1 mouse_genomes_project 19 3052127 3052259 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101999.1 MGP_LPJ_G0040036.1 mouse_genomes_project 19 8964553 8968218 + unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0010309.1 MGP_LPJ_G0008427.1 mouse_genomes_project 19 6067991 6068067 - Mir5136 miRNA miRNA MGP_LPJ_T0051354.1 MGP_LPJ_G0024956.1 mouse_genomes_project 19 28405605 28442777 + MGP_LPJ_P0051354 Il33 protein_coding protein_coding MGP_LPJ_T0051355.1 MGP_LPJ_G0024956.1 mouse_genomes_project 19 28405606 28432604 + MGP_LPJ_P0051355 Il33 protein_coding protein_coding MGP_LPJ_T0051356.1 MGP_LPJ_G0024956.1 mouse_genomes_project 19 28405623 28441033 + MGP_LPJ_P0051356 Il33 protein_coding protein_coding MGP_LPJ_T0051357.1 MGP_LPJ_G0024956.1 mouse_genomes_project 19 28426315 28442763 + MGP_LPJ_P0051357 Il33 protein_coding protein_coding MGP_LPJ_T0051358.1 MGP_LPJ_G0024956.1 mouse_genomes_project 19 28432342 28433328 + MGP_LPJ_P0051358 Il33 protein_coding protein_coding MGP_LPJ_T0050332.1 MGP_LPJ_G0024594.1 mouse_genomes_project 19 1732494 1747744 - MGP_LPJ_P0050332 Ccs protein_coding protein_coding MGP_LPJ_T0050297.1 MGP_LPJ_G0024582.1 mouse_genomes_project 19 1303913 1320330 - MGP_LPJ_P0050297 Rhod protein_coding protein_coding MGP_LPJ_T0050298.1 MGP_LPJ_G0024582.1 mouse_genomes_project 19 1304121 1320319 - MGP_LPJ_P0050298 Rhod protein_coding protein_coding MGP_LPJ_T0050299.1 MGP_LPJ_G0024582.1 mouse_genomes_project 19 1304681 1305010 - Rhod protein_coding processed_transcript MGP_LPJ_T0052043.1 MGP_LPJ_G0025194.1 mouse_genomes_project 19 56747068 56766042 - MGP_LPJ_P0052043 Dclre1a protein_coding nonsense_mediated_decay MGP_LPJ_T0052044.1 MGP_LPJ_G0025194.1 mouse_genomes_project 19 56747070 56765057 - Dclre1a protein_coding retained_intron MGP_LPJ_T0052045.1 MGP_LPJ_G0025194.1 mouse_genomes_project 19 56747070 56766117 - MGP_LPJ_P0052045 Dclre1a protein_coding protein_coding MGP_LPJ_T0052046.1 MGP_LPJ_G0025194.1 mouse_genomes_project 19 56747483 56755284 - Dclre1a protein_coding retained_intron MGP_LPJ_T0052047.1 MGP_LPJ_G0025194.1 mouse_genomes_project 19 56757912 56759447 - Dclre1a protein_coding processed_transcript MGP_LPJ_T0052048.1 MGP_LPJ_G0025194.1 mouse_genomes_project 19 56764759 56765928 - MGP_LPJ_P0052048 Dclre1a protein_coding protein_coding MGP_LPJ_T0050714.1 MGP_LPJ_G0024701.1 mouse_genomes_project 19 3958876 3983286 - MGP_LPJ_P0050714 Fermt3 protein_coding protein_coding MGP_LPJ_T0052127.1 MGP_LPJ_G0025220.1 mouse_genomes_project 19 60601123 60627920 - MGP_LPJ_P0052127 Fam204a protein_coding unknown_likely_coding MGP_LPJ_T0050546.1 MGP_LPJ_G0024669.1 mouse_genomes_project 19 3126602 3135707 - MGP_LPJ_P0050546 Snx15 protein_coding protein_coding MGP_LPJ_T0050547.1 MGP_LPJ_G0024669.1 mouse_genomes_project 19 3127055 3135550 - MGP_LPJ_P0050547 Snx15 protein_coding protein_coding MGP_LPJ_T0050548.1 MGP_LPJ_G0024669.1 mouse_genomes_project 19 3127835 3128846 - Snx15 protein_coding retained_intron MGP_LPJ_T0050549.1 MGP_LPJ_G0024669.1 mouse_genomes_project 19 3127835 3135210 - Snx15 protein_coding processed_transcript MGP_LPJ_T0050550.1 MGP_LPJ_G0024669.1 mouse_genomes_project 19 3128695 3129491 - Snx15 protein_coding processed_transcript MGP_LPJ_T0050551.1 MGP_LPJ_G0024669.1 mouse_genomes_project 19 3129108 3135536 - Snx15 protein_coding retained_intron MGP_LPJ_T0050552.1 MGP_LPJ_G0024669.1 mouse_genomes_project 19 3129130 3135568 - MGP_LPJ_P0050552 Snx15 protein_coding protein_coding MGP_LPJ_T0051495.1 MGP_LPJ_G0025009.1 mouse_genomes_project 19 36506450 36513177 + MGP_LPJ_P0051495 Hhex protein_coding protein_coding MGP_LPJ_T0051791.1 MGP_LPJ_G0025117.1 mouse_genomes_project 19 45078375 45086225 - MGP_LPJ_P0051791 Poll protein_coding unknown_likely_coding MGP_LPJ_T0010301.1 MGP_LPJ_G0008419.1 mouse_genomes_project 19 3279242 3279328 + Mir194-2 miRNA miRNA MGP_LPJ_T0050359.1 MGP_LPJ_G0024608.1 mouse_genomes_project 19 1990021 1992581 + MGP_LPJ_P0050359 Cd248 protein_coding protein_coding MGP_LPJ_T0051884.1 MGP_LPJ_G0025139.1 mouse_genomes_project 19 46110363 46126378 + MGP_LPJ_P0051884 Trim8 protein_coding protein_coding MGP_LPJ_T0050315.1 MGP_LPJ_G0024590.1 mouse_genomes_project 19 1640539 1716122 - MGP_LPJ_P0050315 Gm21992 protein_coding nonsense_mediated_decay MGP_LPJ_T0050323.1 MGP_LPJ_G0024590.1 mouse_genomes_project 19 1687873 1716018 - MGP_LPJ_P0050323 Gm21992 protein_coding protein_coding MGP_LPJ_T0050324.1 MGP_LPJ_G0024590.1 mouse_genomes_project 19 1687874 1715722 - MGP_LPJ_P0050324 Gm21992 protein_coding protein_coding MGP_LPJ_T0050325.1 MGP_LPJ_G0024590.1 mouse_genomes_project 19 1690090 1716018 - MGP_LPJ_P0050325 Gm21992 protein_coding protein_coding MGP_LPJ_T0050327.1 MGP_LPJ_G0024590.1 mouse_genomes_project 19 1693878 1716113 - Gm21992 protein_coding retained_intron MGP_LPJ_T0050328.1 MGP_LPJ_G0024590.1 mouse_genomes_project 19 1696231 1705546 - Gm21992 protein_coding processed_transcript MGP_LPJ_T0011488.1 MGP_LPJ_G0009606.1 mouse_genomes_project 19 2810086 2810208 - Gm28006 misc_RNA misc_RNA MGP_LPJ_T0050314.1 MGP_LPJ_G0024589.1 mouse_genomes_project 19 1608885 1649980 + MGP_LPJ_P0050314 Sptbn2 protein_coding protein_coding MGP_LPJ_T0051421.1 MGP_LPJ_G0024982.1 mouse_genomes_project 19 33011408 33058635 + MGP_LPJ_P0051421 protein_coding unknown_likely_coding MGP_LPJ_T0051422.1 MGP_LPJ_G0024982.1 mouse_genomes_project 19 33011677 33050006 + MGP_LPJ_P0051422 protein_coding protein_coding MGP_LPJ_T0051423.1 MGP_LPJ_G0024982.1 mouse_genomes_project 19 33035996 33054424 + protein_coding retained_intron MGP_LPJ_T0051424.1 MGP_LPJ_G0024982.1 mouse_genomes_project 19 33051269 33052861 + protein_coding processed_transcript MGP_LPJ_T0050690.1 MGP_LPJ_G0024690.1 mouse_genomes_project 19 3874713 3877668 - MGP_LPJ_P0050690 Tex40 protein_coding protein_coding MGP_LPJ_T0050345.1 MGP_LPJ_G0024601.1 mouse_genomes_project 19 1845276 1859389 - MGP_LPJ_P0050345 Peli3 protein_coding protein_coding MGP_LPJ_T0050346.1 MGP_LPJ_G0024601.1 mouse_genomes_project 19 1846481 1859424 - MGP_LPJ_P0050346 Peli3 protein_coding protein_coding MGP_LPJ_T0050347.1 MGP_LPJ_G0024601.1 mouse_genomes_project 19 1851659 1855302 - Peli3 protein_coding retained_intron MGP_LPJ_T0050348.1 MGP_LPJ_G0024601.1 mouse_genomes_project 19 1851685 1859395 - Peli3 protein_coding processed_transcript MGP_LPJ_T0050349.1 MGP_LPJ_G0024601.1 mouse_genomes_project 19 1851689 1859370 - MGP_LPJ_P0050349 Peli3 protein_coding protein_coding MGP_LPJ_T0050350.1 MGP_LPJ_G0024601.1 mouse_genomes_project 19 1851696 1859364 - Peli3 protein_coding processed_transcript MGP_LPJ_T0050351.1 MGP_LPJ_G0024601.1 mouse_genomes_project 19 1857896 1859343 - Peli3 protein_coding retained_intron MGP_LPJ_T0050692.1 MGP_LPJ_G0024692.1 mouse_genomes_project 19 3890361 3893800 - MGP_LPJ_P0050692 Gpr137 protein_coding protein_coding MGP_LPJ_T0050693.1 MGP_LPJ_G0024692.1 mouse_genomes_project 19 3890362 3894743 - MGP_LPJ_P0050693 Gpr137 protein_coding protein_coding MGP_LPJ_T0050694.1 MGP_LPJ_G0024692.1 mouse_genomes_project 19 3890362 3893486 - MGP_LPJ_P0050694 Gpr137 protein_coding protein_coding MGP_LPJ_T0050695.1 MGP_LPJ_G0024692.1 mouse_genomes_project 19 3890362 3893772 - MGP_LPJ_P0050695 Gpr137 protein_coding protein_coding MGP_LPJ_T0050696.1 MGP_LPJ_G0024692.1 mouse_genomes_project 19 3890362 3893486 - MGP_LPJ_P0050696 Gpr137 protein_coding protein_coding MGP_LPJ_T0099305.1 MGP_LPJ_G0037568.1 mouse_genomes_project 19 47429037 47429141 - Gm24805 snRNA snRNA MGP_LPJ_T0051673.1 MGP_LPJ_G0025074.1 mouse_genomes_project 19 41604164 41755633 - MGP_LPJ_P0051673 Crtac1 protein_coding protein_coding MGP_LPJ_T0007128.1 MGP_LPJ_G0005852.1 mouse_genomes_project 19 59887263 59958546 + 2700089I24Rik lincRNA lincRNA MGP_LPJ_T0050767.1 MGP_LPJ_G0024716.1 mouse_genomes_project 19 4609195 4611402 + Hrasls5 protein_coding retained_intron MGP_LPJ_T0050768.1 MGP_LPJ_G0024716.1 mouse_genomes_project 19 4609209 4636431 + MGP_LPJ_P0050768 Hrasls5 protein_coding protein_coding MGP_LPJ_T0050769.1 MGP_LPJ_G0024716.1 mouse_genomes_project 19 4609259 4636830 + MGP_LPJ_P0050769 Hrasls5 protein_coding protein_coding MGP_LPJ_T0007107.1 MGP_LPJ_G0005837.1 mouse_genomes_project 19 42986307 42987859 - Gm20467 lincRNA lincRNA MGP_LPJ_T0051631.1 MGP_LPJ_G0025062.1 mouse_genomes_project 19 41238223 41278702 - MGP_LPJ_P0051631 Mms19 protein_coding nonsense_mediated_decay MGP_LPJ_T0051632.1 MGP_LPJ_G0025062.1 mouse_genomes_project 19 41238223 41278745 - MGP_LPJ_P0051632 Mms19 protein_coding protein_coding MGP_LPJ_T0051633.1 MGP_LPJ_G0025062.1 mouse_genomes_project 19 41241364 41262047 - Mms19 protein_coding retained_intron MGP_LPJ_T0051634.1 MGP_LPJ_G0025062.1 mouse_genomes_project 19 41241368 41267314 - MGP_LPJ_P0051634 Mms19 protein_coding protein_coding MGP_LPJ_T0051635.1 MGP_LPJ_G0025062.1 mouse_genomes_project 19 41241370 41278724 - MGP_LPJ_P0051635 Mms19 protein_coding nonsense_mediated_decay MGP_LPJ_T0051636.1 MGP_LPJ_G0025062.1 mouse_genomes_project 19 41241370 41278705 - MGP_LPJ_P0051636 Mms19 protein_coding nonsense_mediated_decay MGP_LPJ_T0051637.1 MGP_LPJ_G0025062.1 mouse_genomes_project 19 41241536 41278720 - MGP_LPJ_P0051637 Mms19 protein_coding protein_coding MGP_LPJ_T0051638.1 MGP_LPJ_G0025062.1 mouse_genomes_project 19 41241648 41252552 - MGP_LPJ_P0051638 Mms19 protein_coding nonsense_mediated_decay MGP_LPJ_T0051639.1 MGP_LPJ_G0025062.1 mouse_genomes_project 19 41241708 41242787 - Mms19 protein_coding retained_intron MGP_LPJ_T0051640.1 MGP_LPJ_G0025062.1 mouse_genomes_project 19 41244226 41278727 - Mms19 protein_coding retained_intron MGP_LPJ_T0051641.1 MGP_LPJ_G0025062.1 mouse_genomes_project 19 41244414 41251359 - MGP_LPJ_P0051641 Mms19 protein_coding protein_coding MGP_LPJ_T0051642.1 MGP_LPJ_G0025062.1 mouse_genomes_project 19 41244599 41245667 - Mms19 protein_coding retained_intron MGP_LPJ_T0051643.1 MGP_LPJ_G0025062.1 mouse_genomes_project 19 41245109 41278725 - MGP_LPJ_P0051643 Mms19 protein_coding nonsense_mediated_decay MGP_LPJ_T0051644.1 MGP_LPJ_G0025062.1 mouse_genomes_project 19 41247131 41248749 - Mms19 protein_coding retained_intron MGP_LPJ_T0051645.1 MGP_LPJ_G0025062.1 mouse_genomes_project 19 41250511 41278718 - MGP_LPJ_P0051645 Mms19 protein_coding nonsense_mediated_decay MGP_LPJ_T0051646.1 MGP_LPJ_G0025062.1 mouse_genomes_project 19 41251870 41252581 - Mms19 protein_coding retained_intron MGP_LPJ_T0051647.1 MGP_LPJ_G0025062.1 mouse_genomes_project 19 41260208 41260536 - Mms19 protein_coding retained_intron MGP_LPJ_T0051648.1 MGP_LPJ_G0025062.1 mouse_genomes_project 19 41260416 41267333 - MGP_LPJ_P0051648 Mms19 protein_coding protein_coding MGP_LPJ_T0051405.1 MGP_LPJ_G0024972.1 mouse_genomes_project 19 32157527 32350469 - MGP_LPJ_P0051405 Lipo2 protein_coding protein_coding MGP_LPJ_T0052146.1 MGP_LPJ_G0025228.1 mouse_genomes_project 19 61338200 61531309 + MGP_LPJ_P0052146 Grk5 protein_coding protein_coding MGP_LPJ_T0051629.1 MGP_LPJ_G0025061.1 mouse_genomes_project 19 41230843 41241255 + MGP_LPJ_P0051629 Zdhhc16 protein_coding protein_coding MGP_LPJ_T0051630.1 MGP_LPJ_G0025061.1 mouse_genomes_project 19 41230908 41241263 + MGP_LPJ_P0051630 Zdhhc16 protein_coding unknown_likely_coding MGP_LPJ_T0003875.1 MGP_LPJ_G0003471.1 mouse_genomes_project 19 22598928 22613249 + Pip5k1bos antisense antisense MGP_LPJ_T0099297.1 MGP_LPJ_G0037560.1 mouse_genomes_project 19 33681133 33681294 + Gm22082 snRNA snRNA MGP_LPJ_T0051244.1 MGP_LPJ_G0024928.1 mouse_genomes_project 19 23459391 23667038 + MGP_LPJ_P0051244 Kank1 protein_coding protein_coding MGP_LPJ_T0051245.1 MGP_LPJ_G0024928.1 mouse_genomes_project 19 23626320 23641153 + Kank1 protein_coding processed_transcript MGP_LPJ_T0051246.1 MGP_LPJ_G0024928.1 mouse_genomes_project 19 23638079 23658580 + MGP_LPJ_P0051246 Kank1 protein_coding protein_coding MGP_LPJ_T0051247.1 MGP_LPJ_G0024928.1 mouse_genomes_project 19 23654908 23657172 + Kank1 protein_coding retained_intron MGP_LPJ_T0052094.1 MGP_LPJ_G0025204.1 mouse_genomes_project 19 57893132 58454880 + MGP_LPJ_P0052094 Atrnl1 protein_coding protein_coding MGP_LPJ_T0050378.1 MGP_LPJ_G0024615.1 mouse_genomes_project 19 2203898 2226993 - MGP_LPJ_P0050378 Sf3b2 protein_coding protein_coding MGP_LPJ_T0100558.1 MGP_LPJ_G0038821.1 mouse_genomes_project 19 61449447 61449576 - Gm22520 snoRNA snoRNA MGP_LPJ_T0052040.1 MGP_LPJ_G0025193.1 mouse_genomes_project 19 56671872 56696971 + MGP_LPJ_P0052040 Plekhs1 protein_coding protein_coding MGP_LPJ_T0052041.1 MGP_LPJ_G0025193.1 mouse_genomes_project 19 56671872 56696971 + MGP_LPJ_P0052041 Plekhs1 protein_coding protein_coding MGP_LPJ_T0052042.1 MGP_LPJ_G0025193.1 mouse_genomes_project 19 56674805 56696090 + MGP_LPJ_P0052042 Plekhs1 protein_coding unknown_likely_coding MGP_LPJ_T0007091.1 MGP_LPJ_G0005826.1 mouse_genomes_project 19 26471605 26472514 + Gm28228 lincRNA lincRNA MGP_LPJ_T0050728.1 MGP_LPJ_G0024709.1 mouse_genomes_project 19 4249259 4317888 - MGP_LPJ_P0050728 Mark2 protein_coding protein_coding MGP_LPJ_T0050729.1 MGP_LPJ_G0024709.1 mouse_genomes_project 19 4249262 4318485 - MGP_LPJ_P0050729 Mark2 protein_coding protein_coding MGP_LPJ_T0050730.1 MGP_LPJ_G0024709.1 mouse_genomes_project 19 4250599 4318465 - MGP_LPJ_P0050730 Mark2 protein_coding protein_coding MGP_LPJ_T0050731.1 MGP_LPJ_G0024709.1 mouse_genomes_project 19 4250625 4317859 - MGP_LPJ_P0050731 Mark2 protein_coding protein_coding MGP_LPJ_T0050732.1 MGP_LPJ_G0024709.1 mouse_genomes_project 19 4250715 4318470 - MGP_LPJ_P0050732 Mark2 protein_coding protein_coding MGP_LPJ_T0050733.1 MGP_LPJ_G0024709.1 mouse_genomes_project 19 4250715 4256917 - MGP_LPJ_P0050733 Mark2 protein_coding protein_coding MGP_LPJ_T0050734.1 MGP_LPJ_G0024709.1 mouse_genomes_project 19 4250718 4251961 - Mark2 protein_coding retained_intron MGP_LPJ_T0050735.1 MGP_LPJ_G0024709.1 mouse_genomes_project 19 4250956 4317888 - MGP_LPJ_P0050735 Mark2 protein_coding protein_coding MGP_LPJ_T0050736.1 MGP_LPJ_G0024709.1 mouse_genomes_project 19 4251146 4256932 - MGP_LPJ_P0050736 Mark2 protein_coding protein_coding MGP_LPJ_T0050737.1 MGP_LPJ_G0024709.1 mouse_genomes_project 19 4251311 4257045 - MGP_LPJ_P0050737 Mark2 protein_coding protein_coding MGP_LPJ_T0050738.1 MGP_LPJ_G0024709.1 mouse_genomes_project 19 4252368 4257384 - MGP_LPJ_P0050738 Mark2 protein_coding protein_coding MGP_LPJ_T0050739.1 MGP_LPJ_G0024709.1 mouse_genomes_project 19 4253026 4255808 - MGP_LPJ_P0050739 Mark2 protein_coding protein_coding MGP_LPJ_T0050740.1 MGP_LPJ_G0024709.1 mouse_genomes_project 19 4254903 4256977 - MGP_LPJ_P0050740 Mark2 protein_coding nonsense_mediated_decay MGP_LPJ_T0050741.1 MGP_LPJ_G0024709.1 mouse_genomes_project 19 4257003 4258645 - Mark2 protein_coding retained_intron MGP_LPJ_T0050742.1 MGP_LPJ_G0024709.1 mouse_genomes_project 19 4258623 4261418 - Mark2 protein_coding retained_intron MGP_LPJ_T0050743.1 MGP_LPJ_G0024709.1 mouse_genomes_project 19 4259874 4318526 - MGP_LPJ_P0050743 Mark2 protein_coding protein_coding MGP_LPJ_T0050744.1 MGP_LPJ_G0024709.1 mouse_genomes_project 19 4261391 4318270 - MGP_LPJ_P0050744 Mark2 protein_coding protein_coding MGP_LPJ_T0050745.1 MGP_LPJ_G0024709.1 mouse_genomes_project 19 4264393 4318308 - MGP_LPJ_P0050745 Mark2 protein_coding protein_coding MGP_LPJ_T0050746.1 MGP_LPJ_G0024709.1 mouse_genomes_project 19 4264722 4318478 - MGP_LPJ_P0050746 Mark2 protein_coding protein_coding MGP_LPJ_T0051248.1 MGP_LPJ_G0024929.1 mouse_genomes_project 19 23746302 23863307 + MGP_LPJ_P0051248 Dmrt1 protein_coding protein_coding MGP_LPJ_T0051249.1 MGP_LPJ_G0024929.1 mouse_genomes_project 19 23746390 23862424 + MGP_LPJ_P0051249 Dmrt1 protein_coding protein_coding MGP_LPJ_T0051250.1 MGP_LPJ_G0024929.1 mouse_genomes_project 19 23746391 23816042 + Dmrt1 protein_coding processed_transcript MGP_LPJ_T0051977.1 MGP_LPJ_G0025175.1 mouse_genomes_project 19 53379016 53390495 - MGP_LPJ_P0051977 Smndc1 protein_coding protein_coding MGP_LPJ_T0050467.1 MGP_LPJ_G0024647.1 mouse_genomes_project 19 2720007 2734752 - MGP_LPJ_P0050467 Scyl1 protein_coding protein_coding MGP_LPJ_T0051034.1 MGP_LPJ_G0024805.1 mouse_genomes_project 19 8921828 8951305 + MGP_LPJ_P0051034 Ms4a4d protein_coding protein_coding MGP_LPJ_T0050633.1 MGP_LPJ_G0024682.1 mouse_genomes_project 19 3419088 3434995 + MGP_LPJ_P0050633 Rasgrp2 protein_coding protein_coding MGP_LPJ_T0050634.1 MGP_LPJ_G0024682.1 mouse_genomes_project 19 3419204 3423382 + MGP_LPJ_P0050634 Rasgrp2 protein_coding protein_coding MGP_LPJ_T0050635.1 MGP_LPJ_G0024682.1 mouse_genomes_project 19 3419494 3423234 + MGP_LPJ_P0050635 Rasgrp2 protein_coding protein_coding MGP_LPJ_T0050636.1 MGP_LPJ_G0024682.1 mouse_genomes_project 19 3419612 3422323 + MGP_LPJ_P0050636 Rasgrp2 protein_coding protein_coding MGP_LPJ_T0050637.1 MGP_LPJ_G0024682.1 mouse_genomes_project 19 3419616 3423227 + MGP_LPJ_P0050637 Rasgrp2 protein_coding protein_coding MGP_LPJ_T0050638.1 MGP_LPJ_G0024682.1 mouse_genomes_project 19 3419622 3424086 + MGP_LPJ_P0050638 Rasgrp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0050639.1 MGP_LPJ_G0024682.1 mouse_genomes_project 19 3419665 3422195 + Rasgrp2 protein_coding processed_transcript MGP_LPJ_T0050640.1 MGP_LPJ_G0024682.1 mouse_genomes_project 19 3419861 3423387 + MGP_LPJ_P0050640 Rasgrp2 protein_coding protein_coding MGP_LPJ_T0050641.1 MGP_LPJ_G0024682.1 mouse_genomes_project 19 3420275 3422179 + Rasgrp2 protein_coding processed_transcript MGP_LPJ_T0050642.1 MGP_LPJ_G0024682.1 mouse_genomes_project 19 3420281 3434990 + MGP_LPJ_P0050642 Rasgrp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0050643.1 MGP_LPJ_G0024682.1 mouse_genomes_project 19 3420295 3424170 + MGP_LPJ_P0050643 Rasgrp2 protein_coding protein_coding MGP_LPJ_T0050644.1 MGP_LPJ_G0024682.1 mouse_genomes_project 19 3420310 3435001 + MGP_LPJ_P0050644 Rasgrp2 protein_coding protein_coding MGP_LPJ_T0050645.1 MGP_LPJ_G0024682.1 mouse_genomes_project 19 3420312 3424573 + MGP_LPJ_P0050645 Rasgrp2 protein_coding protein_coding MGP_LPJ_T0050646.1 MGP_LPJ_G0024682.1 mouse_genomes_project 19 3420331 3435000 + MGP_LPJ_P0050646 Rasgrp2 protein_coding protein_coding MGP_LPJ_T0050647.1 MGP_LPJ_G0024682.1 mouse_genomes_project 19 3420371 3423361 + MGP_LPJ_P0050647 Rasgrp2 protein_coding protein_coding MGP_LPJ_T0050648.1 MGP_LPJ_G0024682.1 mouse_genomes_project 19 3421443 3422195 + Rasgrp2 protein_coding processed_transcript MGP_LPJ_T0050649.1 MGP_LPJ_G0024682.1 mouse_genomes_project 19 3421450 3423387 + MGP_LPJ_P0050649 Rasgrp2 protein_coding protein_coding MGP_LPJ_T0050650.1 MGP_LPJ_G0024682.1 mouse_genomes_project 19 3421466 3423387 + MGP_LPJ_P0050650 Rasgrp2 protein_coding protein_coding MGP_LPJ_T0050651.1 MGP_LPJ_G0024682.1 mouse_genomes_project 19 3421467 3423387 + Rasgrp2 protein_coding processed_transcript MGP_LPJ_T0050652.1 MGP_LPJ_G0024682.1 mouse_genomes_project 19 3422666 3424720 + Rasgrp2 protein_coding retained_intron MGP_LPJ_T0050653.1 MGP_LPJ_G0024682.1 mouse_genomes_project 19 3424330 3426810 + Rasgrp2 protein_coding retained_intron MGP_LPJ_T0050654.1 MGP_LPJ_G0024682.1 mouse_genomes_project 19 3424489 3429417 + Rasgrp2 protein_coding retained_intron MGP_LPJ_T0050655.1 MGP_LPJ_G0024682.1 mouse_genomes_project 19 3424575 3433790 + Rasgrp2 protein_coding retained_intron MGP_LPJ_T0050656.1 MGP_LPJ_G0024682.1 mouse_genomes_project 19 3428153 3434996 + Rasgrp2 protein_coding processed_transcript MGP_LPJ_T0050999.1 MGP_LPJ_G0024796.1 mouse_genomes_project 19 8610376 8617146 - Ms4a5 protein_coding retained_intron MGP_LPJ_T0051000.1 MGP_LPJ_G0024796.1 mouse_genomes_project 19 8611004 8621516 - MGP_LPJ_P0051000 Ms4a5 protein_coding protein_coding MGP_LPJ_T0051001.1 MGP_LPJ_G0024796.1 mouse_genomes_project 19 8611004 8621576 - MGP_LPJ_P0051001 Ms4a5 protein_coding protein_coding MGP_LPJ_T0051002.1 MGP_LPJ_G0024796.1 mouse_genomes_project 19 8611299 8617357 - Ms4a5 protein_coding processed_transcript MGP_LPJ_T0051003.1 MGP_LPJ_G0024796.1 mouse_genomes_project 19 8614439 8621563 - MGP_LPJ_P0051003 Ms4a5 protein_coding nonsense_mediated_decay MGP_LPJ_T0052002.1 MGP_LPJ_G0025187.1 mouse_genomes_project 19 55441067 55459069 - MGP_LPJ_P0052002 Zdhhc6 protein_coding protein_coding MGP_LPJ_T0052003.1 MGP_LPJ_G0025187.1 mouse_genomes_project 19 55441551 55458956 - MGP_LPJ_P0052003 Zdhhc6 protein_coding unknown_likely_coding MGP_LPJ_T0003869.1 MGP_LPJ_G0003467.1 mouse_genomes_project 19 8546651 8639568 + 4930526L06Rik antisense antisense MGP_LPJ_T0050261.1 MGP_LPJ_G0024576.1 mouse_genomes_project 19 1051729 1060981 + MGP_LPJ_P0050261 Clcf1 protein_coding protein_coding MGP_LPJ_T0050262.1 MGP_LPJ_G0024576.1 mouse_genomes_project 19 1051755 1060981 + Clcf1 protein_coding retained_intron MGP_LPJ_T0050263.1 MGP_LPJ_G0024576.1 mouse_genomes_project 19 1051796 1060981 + MGP_LPJ_P0050263 Clcf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0050264.1 MGP_LPJ_G0024576.1 mouse_genomes_project 19 1052085 1060004 + Clcf1 protein_coding processed_transcript MGP_LPJ_T0050489.1 MGP_LPJ_G0024655.1 mouse_genomes_project 19 2983736 3011395 - MGP_LPJ_P0050489 Capn1 protein_coding protein_coding MGP_LPJ_T0050490.1 MGP_LPJ_G0024655.1 mouse_genomes_project 19 2983736 3010817 - MGP_LPJ_P0050490 Capn1 protein_coding protein_coding MGP_LPJ_T0052119.1 MGP_LPJ_G0025216.1 mouse_genomes_project 19 59647389 59682481 + MGP_LPJ_P0052119 Slc18a2 protein_coding protein_coding MGP_LPJ_T0051116.1 MGP_LPJ_G0024858.1 mouse_genomes_project 19 10771252 10772176 + MGP_LPJ_P0051116 Olfr1462 protein_coding protein_coding MGP_LPJ_T0051529.1 MGP_LPJ_G0025022.1 mouse_genomes_project 19 37956141 37988911 - MGP_LPJ_P0051529 Noc3l protein_coding protein_coding MGP_LPJ_T0051982.1 MGP_LPJ_G0025178.1 mouse_genomes_project 19 53721982 53933975 + MGP_LPJ_P0051982 Rbm20 protein_coding protein_coding MGP_LPJ_T0051983.1 MGP_LPJ_G0025178.1 mouse_genomes_project 19 53721982 53909371 + MGP_LPJ_P0051983 Rbm20 protein_coding protein_coding MGP_LPJ_T0051984.1 MGP_LPJ_G0025178.1 mouse_genomes_project 19 53858154 53878766 + Rbm20 protein_coding processed_transcript MGP_LPJ_T0051985.1 MGP_LPJ_G0025178.1 mouse_genomes_project 19 53908817 53933975 + MGP_LPJ_P0051985 Rbm20 protein_coding nonsense_mediated_decay MGP_LPJ_T0050237.1 MGP_LPJ_G0024569.1 mouse_genomes_project 19 978967 985949 + MGP_LPJ_P0050237 Coro1b protein_coding protein_coding MGP_LPJ_T0050238.1 MGP_LPJ_G0024569.1 mouse_genomes_project 19 978967 980853 + MGP_LPJ_P0050238 Coro1b protein_coding protein_coding MGP_LPJ_T0050239.1 MGP_LPJ_G0024569.1 mouse_genomes_project 19 978976 979903 + Coro1b protein_coding retained_intron MGP_LPJ_T0050240.1 MGP_LPJ_G0024569.1 mouse_genomes_project 19 978980 979983 + Coro1b protein_coding retained_intron MGP_LPJ_T0050241.1 MGP_LPJ_G0024569.1 mouse_genomes_project 19 979009 981848 + Coro1b protein_coding processed_transcript MGP_LPJ_T0050242.1 MGP_LPJ_G0024569.1 mouse_genomes_project 19 979012 980602 + Coro1b protein_coding retained_intron MGP_LPJ_T0050243.1 MGP_LPJ_G0024569.1 mouse_genomes_project 19 980891 984722 + Coro1b protein_coding retained_intron MGP_LPJ_T0050244.1 MGP_LPJ_G0024569.1 mouse_genomes_project 19 981718 985358 + Coro1b protein_coding retained_intron MGP_LPJ_T0050245.1 MGP_LPJ_G0024569.1 mouse_genomes_project 19 981928 985575 + Coro1b protein_coding retained_intron MGP_LPJ_T0051885.1 MGP_LPJ_G0025140.1 mouse_genomes_project 19 46145795 46199511 - MGP_LPJ_P0051885 Arl3 protein_coding protein_coding MGP_LPJ_T0051720.1 MGP_LPJ_G0025088.1 mouse_genomes_project 19 43241541 43308253 - MGP_LPJ_P0051720 Dnmbp protein_coding protein_coding MGP_LPJ_T0051721.1 MGP_LPJ_G0025088.1 mouse_genomes_project 19 43241667 43318529 - MGP_LPJ_P0051721 Dnmbp protein_coding unknown_likely_coding MGP_LPJ_T0013355.1 MGP_LPJ_G0011446.1 mouse_genomes_project 19 27178352 27178622 - processed_pseudogene processed_pseudogene MGP_LPJ_T0050466.1 MGP_LPJ_G0024646.1 mouse_genomes_project 19 2702666 2720113 + MGP_LPJ_P0050466 Ltbp3 protein_coding protein_coding MGP_LPJ_T0050426.1 MGP_LPJ_G0024632.1 mouse_genomes_project 19 2445885 2463394 - MGP_LPJ_P0050426 Snx32 protein_coding protein_coding MGP_LPJ_T0007076.1 MGP_LPJ_G0005814.1 mouse_genomes_project 19 3686210 3687696 + Gm14968 lincRNA lincRNA MGP_LPJ_T0013350.1 MGP_LPJ_G0011441.1 mouse_genomes_project 19 18529655 18530339 - processed_pseudogene processed_pseudogene MGP_LPJ_T0051506.1 MGP_LPJ_G0025016.1 mouse_genomes_project 19 37234831 37243435 - MGP_LPJ_P0051506 Rbp4 protein_coding protein_coding MGP_LPJ_T0051507.1 MGP_LPJ_G0025016.1 mouse_genomes_project 19 37234831 37242924 - MGP_LPJ_P0051507 Rbp4 protein_coding protein_coding MGP_LPJ_T0001049.1 MGP_LPJ_G0000974.1 mouse_genomes_project 19 12313105 12313372 + TEC TEC MGP_LPJ_T0050488.1 MGP_LPJ_G0024654.1 mouse_genomes_project 19 2961455 2981334 - MGP_LPJ_P0050488 Slc22a20 protein_coding protein_coding MGP_LPJ_T0051777.1 MGP_LPJ_G0025111.1 mouse_genomes_project 19 44511455 44515506 - Pdzd7 protein_coding processed_transcript MGP_LPJ_T0051778.1 MGP_LPJ_G0025111.1 mouse_genomes_project 19 44511456 44534182 - MGP_LPJ_P0051778 Pdzd7 protein_coding protein_coding MGP_LPJ_T0051779.1 MGP_LPJ_G0025111.1 mouse_genomes_project 19 44511456 44533340 - MGP_LPJ_P0051779 Pdzd7 protein_coding protein_coding MGP_LPJ_T0051318.1 MGP_LPJ_G0024945.1 mouse_genomes_project 19 27692689 27758903 + MGP_LPJ_P0051318 Jak2 protein_coding protein_coding MGP_LPJ_T0051319.1 MGP_LPJ_G0024945.1 mouse_genomes_project 19 27692689 27758903 + MGP_LPJ_P0051319 Jak2 protein_coding protein_coding MGP_LPJ_T0010321.1 MGP_LPJ_G0008439.1 mouse_genomes_project 19 31847825 31847915 + Mir3970 miRNA miRNA MGP_LPJ_T0050379.1 MGP_LPJ_G0024616.1 mouse_genomes_project 19 2229868 2240211 + MGP_LPJ_P0050379 Gal3st3 protein_coding protein_coding MGP_LPJ_T0051035.1 MGP_LPJ_G0024806.1 mouse_genomes_project 19 8982534 8988476 - Ms4a6d protein_coding processed_transcript MGP_LPJ_T0051036.1 MGP_LPJ_G0024806.1 mouse_genomes_project 19 8982640 8994576 - MGP_LPJ_P0051036 Ms4a6d protein_coding protein_coding MGP_LPJ_T0051037.1 MGP_LPJ_G0024806.1 mouse_genomes_project 19 8983518 8988570 - Ms4a6d protein_coding retained_intron MGP_LPJ_T0050677.1 MGP_LPJ_G0024687.1 mouse_genomes_project 19 3855898 3859180 - Prdx5 protein_coding retained_intron MGP_LPJ_T0050678.1 MGP_LPJ_G0024687.1 mouse_genomes_project 19 3855907 3859308 - MGP_LPJ_P0050678 Prdx5 protein_coding protein_coding MGP_LPJ_T0050679.1 MGP_LPJ_G0024687.1 mouse_genomes_project 19 3855951 3857503 - MGP_LPJ_P0050679 Prdx5 protein_coding protein_coding MGP_LPJ_T0050680.1 MGP_LPJ_G0024687.1 mouse_genomes_project 19 3856047 3858819 - MGP_LPJ_P0050680 Prdx5 protein_coding protein_coding MGP_LPJ_T0050343.1 MGP_LPJ_G0024599.1 mouse_genomes_project 19 1799057 1819995 - MGP_LPJ_P0050343 Bbs1 protein_coding protein_coding MGP_LPJ_T0050758.1 MGP_LPJ_G0024713.1 mouse_genomes_project 19 4486037 4534746 + MGP_LPJ_P0050758 Atl3 protein_coding protein_coding MGP_LPJ_T0050759.1 MGP_LPJ_G0024713.1 mouse_genomes_project 19 4486435 4534746 + MGP_LPJ_P0050759 Atl3 protein_coding protein_coding MGP_LPJ_T0051130.1 MGP_LPJ_G0024872.1 mouse_genomes_project 19 11357225 11358173 + MGP_LPJ_P0051130 Olfr1494 protein_coding protein_coding MGP_LPJ_T0051744.1 MGP_LPJ_G0025095.1 mouse_genomes_project 19 43558144 43601940 - MGP_LPJ_P0051744 Pkd2l1 protein_coding protein_coding MGP_LPJ_T0051745.1 MGP_LPJ_G0025095.1 mouse_genomes_project 19 43558145 43601940 - Pkd2l1 protein_coding retained_intron MGP_LPJ_T0051746.1 MGP_LPJ_G0025095.1 mouse_genomes_project 19 43559014 43613079 - MGP_LPJ_P0051746 Pkd2l1 protein_coding unknown_likely_coding MGP_LPJ_T0050860.1 MGP_LPJ_G0024739.1 mouse_genomes_project 19 6059320 6060238 - MGP_LPJ_P0050860 Uqcc3 protein_coding protein_coding MGP_LPJ_T0051064.1 MGP_LPJ_G0024821.1 mouse_genomes_project 19 9466981 9467914 - MGP_LPJ_P0051064 Olfr1423 protein_coding protein_coding MGP_LPJ_T0052104.1 MGP_LPJ_G0025206.1 mouse_genomes_project 19 58849981 58894004 + MGP_LPJ_P0052104 Ccdc172 protein_coding protein_coding MGP_LPJ_T0051370.1 MGP_LPJ_G0024960.1 mouse_genomes_project 19 28737132 28747360 + MGP_LPJ_P0051370 Mbl2 protein_coding protein_coding MGP_LPJ_T0003861.1 MGP_LPJ_G0003462.1 mouse_genomes_project 19 3374290 3382308 - Gm14966 antisense antisense MGP_LPJ_T0003862.1 MGP_LPJ_G0003462.1 mouse_genomes_project 19 3374366 3382532 - Gm14966 antisense antisense MGP_LPJ_T0051060.1 MGP_LPJ_G0024817.1 mouse_genomes_project 19 9275829 9276989 - MGP_LPJ_P0051060 Olfr1419 protein_coding protein_coding MGP_LPJ_T0051349.1 MGP_LPJ_G0024954.1 mouse_genomes_project 19 28181236 28227360 - MGP_LPJ_P0051349 9930021J03Rik protein_coding protein_coding MGP_LPJ_T0051350.1 MGP_LPJ_G0024954.1 mouse_genomes_project 19 28181498 28279926 - MGP_LPJ_P0051350 9930021J03Rik protein_coding protein_coding MGP_LPJ_T0051351.1 MGP_LPJ_G0024954.1 mouse_genomes_project 19 28181931 28279784 - MGP_LPJ_P0051351 9930021J03Rik protein_coding protein_coding MGP_LPJ_T0051352.1 MGP_LPJ_G0024954.1 mouse_genomes_project 19 28186645 28227422 - MGP_LPJ_P0051352 9930021J03Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0050477.1 MGP_LPJ_G0024651.1 mouse_genomes_project 19 2862843 2883866 - MGP_LPJ_P0050477 Dpf2 protein_coding protein_coding MGP_LPJ_T0050478.1 MGP_LPJ_G0024651.1 mouse_genomes_project 19 2864271 2870806 - Dpf2 protein_coding retained_intron MGP_LPJ_T0050479.1 MGP_LPJ_G0024651.1 mouse_genomes_project 19 2864283 2883767 - MGP_LPJ_P0050479 Dpf2 protein_coding unknown_likely_coding MGP_LPJ_T0050480.1 MGP_LPJ_G0024651.1 mouse_genomes_project 19 2866797 2869915 - Dpf2 protein_coding retained_intron MGP_LPJ_T0050481.1 MGP_LPJ_G0024651.1 mouse_genomes_project 19 2871620 2883772 - Dpf2 protein_coding retained_intron MGP_LPJ_T0050482.1 MGP_LPJ_G0024651.1 mouse_genomes_project 19 2872599 2883764 - Dpf2 protein_coding retained_intron MGP_LPJ_T0050483.1 MGP_LPJ_G0024651.1 mouse_genomes_project 19 2873010 2884005 - Dpf2 protein_coding processed_transcript MGP_LPJ_T0050484.1 MGP_LPJ_G0024651.1 mouse_genomes_project 19 2882820 2883802 - Dpf2 protein_coding processed_transcript MGP_LPJ_T0013361.1 MGP_LPJ_G0011452.1 mouse_genomes_project 19 42639149 42640049 + processed_pseudogene processed_pseudogene MGP_LPJ_T0051169.1 MGP_LPJ_G0024894.1 mouse_genomes_project 19 16423422 16479545 - MGP_LPJ_P0051169 Ostf1 protein_coding protein_coding MGP_LPJ_T0051170.1 MGP_LPJ_G0024894.1 mouse_genomes_project 19 16425087 16479497 - Ostf1 protein_coding retained_intron MGP_LPJ_T0051171.1 MGP_LPJ_G0024894.1 mouse_genomes_project 19 16438836 16479475 - Ostf1 protein_coding retained_intron MGP_LPJ_T0051321.1 MGP_LPJ_G0024947.1 mouse_genomes_project 19 27785321 27788705 - Rln1 protein_coding retained_intron MGP_LPJ_T0051322.1 MGP_LPJ_G0024947.1 mouse_genomes_project 19 27785858 27788823 - MGP_LPJ_P0051322 Rln1 protein_coding protein_coding MGP_LPJ_T0100553.1 MGP_LPJ_G0038816.1 mouse_genomes_project 19 45952120 45952229 + Gm24610 snoRNA snoRNA MGP_LPJ_T0051441.1 MGP_LPJ_G0024994.1 mouse_genomes_project 19 33699062 33771381 - MGP_LPJ_P0051441 Pank1 protein_coding protein_coding MGP_LPJ_T0051442.1 MGP_LPJ_G0024994.1 mouse_genomes_project 19 33699063 33769843 - MGP_LPJ_P0051442 Pank1 protein_coding protein_coding MGP_LPJ_T0050498.1 MGP_LPJ_G0024657.1 mouse_genomes_project 19 3061066 3065188 - MGP_LPJ_P0050498 Mrpl49 protein_coding protein_coding MGP_LPJ_T0051211.1 MGP_LPJ_G0024908.1 mouse_genomes_project 19 19661773 19694040 + MGP_LPJ_P0051211 Abhd17b protein_coding protein_coding MGP_LPJ_T0050672.1 MGP_LPJ_G0024684.1 mouse_genomes_project 19 3564090 3571213 - MGP_LPJ_P0050672 Slc22a12 protein_coding protein_coding MGP_LPJ_T0050673.1 MGP_LPJ_G0024684.1 mouse_genomes_project 19 3564285 3569743 - Slc22a12 protein_coding processed_transcript MGP_LPJ_T0050674.1 MGP_LPJ_G0024684.1 mouse_genomes_project 19 3565930 3570905 - MGP_LPJ_P0050674 Slc22a12 protein_coding protein_coding MGP_LPJ_T0051068.1 MGP_LPJ_G0024825.1 mouse_genomes_project 19 9692606 9693313 + MGP_LPJ_P0051068 protein_coding protein_coding MGP_LPJ_T0010331.1 MGP_LPJ_G0008449.1 mouse_genomes_project 19 41601208 41601297 - Mir3085 miRNA miRNA MGP_LPJ_T0051521.1 MGP_LPJ_G0025020.1 mouse_genomes_project 19 37532649 37542854 + MGP_LPJ_P0051521 Slc35g1 protein_coding protein_coding MGP_LPJ_T0099284.1 MGP_LPJ_G0037547.1 mouse_genomes_project 19 249620 249725 + Gm23940 snRNA snRNA MGP_LPJ_T0050366.1 MGP_LPJ_G0024611.1 mouse_genomes_project 19 2016096 2021825 - MGP_LPJ_P0050366 Cnih2 protein_coding protein_coding MGP_LPJ_T0101650.1 MGP_LPJ_G0039707.1 mouse_genomes_project 19 45941237 45943361 - unitary_pseudogene processed_transcript MGP_LPJ_T0101651.1 MGP_LPJ_G0039707.1 mouse_genomes_project 19 45941935 45943361 - unitary_pseudogene unitary_pseudogene MGP_LPJ_T0011497.1 MGP_LPJ_G0009615.1 mouse_genomes_project 19 37612725 37612808 - Gm24930 misc_RNA misc_RNA MGP_LPJ_T0051945.1 MGP_LPJ_G0025164.1 mouse_genomes_project 19 47594313 47608838 + MGP_LPJ_P0051945 Gsto1 protein_coding protein_coding MGP_LPJ_T0051946.1 MGP_LPJ_G0025164.1 mouse_genomes_project 19 47594426 47595069 + Gsto1 protein_coding retained_intron MGP_LPJ_T0051947.1 MGP_LPJ_G0025164.1 mouse_genomes_project 19 47607042 47608615 + Gsto1 protein_coding retained_intron MGP_LPJ_T0050773.1 MGP_LPJ_G0024718.1 mouse_genomes_project 19 4789789 4814362 - MGP_LPJ_P0050773 Slc22a26 protein_coding protein_coding MGP_LPJ_T0050774.1 MGP_LPJ_G0024718.1 mouse_genomes_project 19 4790728 4814451 - MGP_LPJ_P0050774 Slc22a26 protein_coding protein_coding MGP_LPJ_T0013348.1 MGP_LPJ_G0011439.1 mouse_genomes_project 19 14003121 14004899 + processed_pseudogene processed_pseudogene MGP_LPJ_T0051202.1 MGP_LPJ_G0024906.1 mouse_genomes_project 19 19557744 19559728 + MGP_LPJ_P0051202 Gm3443 protein_coding protein_coding MGP_LPJ_T0100527.1 MGP_LPJ_G0038790.1 mouse_genomes_project 19 901397 901613 - Gm23927 snoRNA snoRNA MGP_LPJ_T0051548.1 MGP_LPJ_G0025032.1 mouse_genomes_project 19 38769258 39092346 - MGP_LPJ_P0051548 protein_coding protein_coding MGP_LPJ_T0051551.1 MGP_LPJ_G0025032.1 mouse_genomes_project 19 39078998 39092281 - protein_coding processed_transcript MGP_LPJ_T0051552.1 MGP_LPJ_G0025032.1 mouse_genomes_project 19 39079138 39092276 - MGP_LPJ_P0051552 protein_coding protein_coding MGP_LPJ_T0051014.1 MGP_LPJ_G0024801.1 mouse_genomes_project 19 8793196 8891743 + Ms4a4b protein_coding retained_intron MGP_LPJ_T0051015.1 MGP_LPJ_G0024801.1 mouse_genomes_project 19 8793196 8893060 + Ms4a4b protein_coding retained_intron MGP_LPJ_T0051016.1 MGP_LPJ_G0024801.1 mouse_genomes_project 19 8793216 8814079 + MGP_LPJ_P0051016 Ms4a4b protein_coding protein_coding MGP_LPJ_T0051017.1 MGP_LPJ_G0024801.1 mouse_genomes_project 19 8811668 8813818 + Ms4a4b protein_coding retained_intron MGP_LPJ_T0051018.1 MGP_LPJ_G0024801.1 mouse_genomes_project 19 8811784 8813818 + Ms4a4b protein_coding processed_transcript MGP_LPJ_T0051019.1 MGP_LPJ_G0024801.1 mouse_genomes_project 19 8813018 8813818 + Ms4a4b protein_coding retained_intron MGP_LPJ_T0007080.1 MGP_LPJ_G0005818.1 mouse_genomes_project 19 8711740 8713353 + Gm28935 lincRNA lincRNA MGP_LPJ_T0007088.1 MGP_LPJ_G0005825.1 mouse_genomes_project 19 23940053 23941159 - 2610016A17Rik lincRNA lincRNA MGP_LPJ_T0007089.1 MGP_LPJ_G0005825.1 mouse_genomes_project 19 23940091 23941142 - 2610016A17Rik lincRNA lincRNA MGP_LPJ_T0007090.1 MGP_LPJ_G0005825.1 mouse_genomes_project 19 23940484 23941173 - 2610016A17Rik lincRNA lincRNA MGP_LPJ_T0050614.1 MGP_LPJ_G0024680.1 mouse_genomes_project 19 3382462 3396802 + MGP_LPJ_P0050614 Sf1 protein_coding protein_coding MGP_LPJ_T0050615.1 MGP_LPJ_G0024680.1 mouse_genomes_project 19 3382491 3395975 + MGP_LPJ_P0050615 Sf1 protein_coding protein_coding MGP_LPJ_T0050616.1 MGP_LPJ_G0024680.1 mouse_genomes_project 19 3382582 3395284 + MGP_LPJ_P0050616 Sf1 protein_coding protein_coding MGP_LPJ_T0050617.1 MGP_LPJ_G0024680.1 mouse_genomes_project 19 3382694 3384728 + Sf1 protein_coding retained_intron MGP_LPJ_T0050618.1 MGP_LPJ_G0024680.1 mouse_genomes_project 19 3382694 3395968 + MGP_LPJ_P0050618 Sf1 protein_coding protein_coding MGP_LPJ_T0050619.1 MGP_LPJ_G0024680.1 mouse_genomes_project 19 3382694 3395974 + MGP_LPJ_P0050619 Sf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0050620.1 MGP_LPJ_G0024680.1 mouse_genomes_project 19 3382735 3387557 + Sf1 protein_coding retained_intron MGP_LPJ_T0050621.1 MGP_LPJ_G0024680.1 mouse_genomes_project 19 3382966 3390966 + MGP_LPJ_P0050621 Sf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0050622.1 MGP_LPJ_G0024680.1 mouse_genomes_project 19 3383329 3391392 + MGP_LPJ_P0050622 Sf1 protein_coding protein_coding MGP_LPJ_T0050623.1 MGP_LPJ_G0024680.1 mouse_genomes_project 19 3388891 3390865 + Sf1 protein_coding processed_transcript MGP_LPJ_T0050624.1 MGP_LPJ_G0024680.1 mouse_genomes_project 19 3389484 3390467 + Sf1 protein_coding retained_intron MGP_LPJ_T0050625.1 MGP_LPJ_G0024680.1 mouse_genomes_project 19 3391185 3391694 + Sf1 protein_coding retained_intron MGP_LPJ_T0050626.1 MGP_LPJ_G0024680.1 mouse_genomes_project 19 3392393 3395426 + MGP_LPJ_P0050626 Sf1 protein_coding protein_coding MGP_LPJ_T0050627.1 MGP_LPJ_G0024680.1 mouse_genomes_project 19 3392782 3395284 + MGP_LPJ_P0050627 Sf1 protein_coding protein_coding MGP_LPJ_T0050628.1 MGP_LPJ_G0024680.1 mouse_genomes_project 19 3392901 3394552 + MGP_LPJ_P0050628 Sf1 protein_coding protein_coding MGP_LPJ_T0051545.1 MGP_LPJ_G0025029.1 mouse_genomes_project 19 38559741 38618521 - MGP_LPJ_P0051545 Cyp2c38 protein_coding protein_coding MGP_LPJ_T0010332.1 MGP_LPJ_G0008450.1 mouse_genomes_project 19 42999688 42999803 + Gm22646 miRNA miRNA MGP_LPJ_T0007078.1 MGP_LPJ_G0005816.1 mouse_genomes_project 19 8377800 8379468 - Gm28347 lincRNA lincRNA MGP_LPJ_T0051553.1 MGP_LPJ_G0025035.1 mouse_genomes_project 19 39195617 39224469 + MGP_LPJ_P0051553 protein_coding protein_coding MGP_LPJ_T0050187.1 MGP_LPJ_G0024556.1 mouse_genomes_project 19 800308 806611 + MGP_LPJ_P0050187 Acy3 protein_coding unknown_likely_coding MGP_LPJ_T0050188.1 MGP_LPJ_G0024556.1 mouse_genomes_project 19 800397 807526 + MGP_LPJ_P0050188 Acy3 protein_coding protein_coding MGP_LPJ_T0003854.1 MGP_LPJ_G0003459.1 mouse_genomes_project 19 2351288 2362126 + 4930481A15Rik antisense antisense MGP_LPJ_T0003855.1 MGP_LPJ_G0003459.1 mouse_genomes_project 19 2351341 2362229 + 4930481A15Rik antisense antisense MGP_LPJ_T0003856.1 MGP_LPJ_G0003459.1 mouse_genomes_project 19 2351348 2362133 + 4930481A15Rik antisense antisense MGP_LPJ_T0003857.1 MGP_LPJ_G0003459.1 mouse_genomes_project 19 2351400 2368617 + 4930481A15Rik antisense antisense MGP_LPJ_T0001048.1 MGP_LPJ_G0000973.1 mouse_genomes_project 19 8978953 8980485 - TEC TEC MGP_LPJ_T0003888.1 MGP_LPJ_G0003481.1 mouse_genomes_project 19 47313751 47327474 - Gm16068 antisense antisense MGP_LPJ_T0051865.1 MGP_LPJ_G0025132.1 mouse_genomes_project 19 45895395 45903766 + MGP_LPJ_P0051865 Nfkb2 protein_coding protein_coding MGP_LPJ_T0051866.1 MGP_LPJ_G0025132.1 mouse_genomes_project 19 45896353 45903766 + MGP_LPJ_P0051866 Nfkb2 protein_coding protein_coding MGP_LPJ_T0051918.1 MGP_LPJ_G0025159.1 mouse_genomes_project 19 47211868 47251870 - MGP_LPJ_P0051918 Obfc1 protein_coding protein_coding MGP_LPJ_T0051919.1 MGP_LPJ_G0025159.1 mouse_genomes_project 19 47211873 47221830 - Obfc1 protein_coding processed_transcript MGP_LPJ_T0051920.1 MGP_LPJ_G0025159.1 mouse_genomes_project 19 47220261 47251787 - MGP_LPJ_P0051920 Obfc1 protein_coding protein_coding MGP_LPJ_T0051921.1 MGP_LPJ_G0025159.1 mouse_genomes_project 19 47236852 47251715 - Obfc1 protein_coding processed_transcript MGP_LPJ_T0051922.1 MGP_LPJ_G0025159.1 mouse_genomes_project 19 47238801 47251647 - Obfc1 protein_coding processed_transcript MGP_LPJ_T0051923.1 MGP_LPJ_G0025159.1 mouse_genomes_project 19 47238930 47251845 - Obfc1 protein_coding retained_intron MGP_LPJ_T0051924.1 MGP_LPJ_G0025159.1 mouse_genomes_project 19 47239435 47252420 - MGP_LPJ_P0051924 Obfc1 protein_coding protein_coding MGP_LPJ_T0051925.1 MGP_LPJ_G0025159.1 mouse_genomes_project 19 47247099 47251013 - Obfc1 protein_coding processed_transcript MGP_LPJ_T0051926.1 MGP_LPJ_G0025159.1 mouse_genomes_project 19 47250665 47251797 - Obfc1 protein_coding retained_intron MGP_LPJ_T0051927.1 MGP_LPJ_G0025159.1 mouse_genomes_project 19 47251040 47251775 - Obfc1 protein_coding processed_transcript MGP_LPJ_T0051158.1 MGP_LPJ_G0024890.1 mouse_genomes_project 19 14729250 15009193 + MGP_LPJ_P0051158 Prune2 protein_coding protein_coding MGP_LPJ_T0051159.1 MGP_LPJ_G0024890.1 mouse_genomes_project 19 14919586 15009202 + MGP_LPJ_P0051159 Prune2 protein_coding unknown_likely_coding MGP_LPJ_T0052070.1 MGP_LPJ_G0025201.1 mouse_genomes_project 19 57277492 57464963 - MGP_LPJ_P0052070 Ablim1 protein_coding protein_coding MGP_LPJ_T0052071.1 MGP_LPJ_G0025201.1 mouse_genomes_project 19 57277649 57365777 - MGP_LPJ_P0052071 Ablim1 protein_coding protein_coding MGP_LPJ_T0052072.1 MGP_LPJ_G0025201.1 mouse_genomes_project 19 57278025 57365777 - MGP_LPJ_P0052072 Ablim1 protein_coding protein_coding MGP_LPJ_T0052073.1 MGP_LPJ_G0025201.1 mouse_genomes_project 19 57278032 57446894 - MGP_LPJ_P0052073 Ablim1 protein_coding protein_coding MGP_LPJ_T0052074.1 MGP_LPJ_G0025201.1 mouse_genomes_project 19 57281037 57490027 - MGP_LPJ_P0052074 Ablim1 protein_coding protein_coding MGP_LPJ_T0052075.1 MGP_LPJ_G0025201.1 mouse_genomes_project 19 57281180 57365775 - MGP_LPJ_P0052075 Ablim1 protein_coding protein_coding MGP_LPJ_T0052076.1 MGP_LPJ_G0025201.1 mouse_genomes_project 19 57281241 57365681 - MGP_LPJ_P0052076 Ablim1 protein_coding protein_coding MGP_LPJ_T0052077.1 MGP_LPJ_G0025201.1 mouse_genomes_project 19 57281458 57446719 - MGP_LPJ_P0052077 Ablim1 protein_coding protein_coding MGP_LPJ_T0052078.1 MGP_LPJ_G0025201.1 mouse_genomes_project 19 57281740 57490559 - MGP_LPJ_P0052078 Ablim1 protein_coding protein_coding MGP_LPJ_T0052079.1 MGP_LPJ_G0025201.1 mouse_genomes_project 19 57281778 57464896 - MGP_LPJ_P0052079 Ablim1 protein_coding protein_coding MGP_LPJ_T0052080.1 MGP_LPJ_G0025201.1 mouse_genomes_project 19 57281914 57446654 - MGP_LPJ_P0052080 Ablim1 protein_coding protein_coding MGP_LPJ_T0052081.1 MGP_LPJ_G0025201.1 mouse_genomes_project 19 57281956 57446759 - MGP_LPJ_P0052081 Ablim1 protein_coding protein_coding MGP_LPJ_T0052082.1 MGP_LPJ_G0025201.1 mouse_genomes_project 19 57282025 57568266 - Ablim1 protein_coding retained_intron MGP_LPJ_T0052083.1 MGP_LPJ_G0025201.1 mouse_genomes_project 19 57284215 57292022 - Ablim1 protein_coding processed_transcript MGP_LPJ_T0052084.1 MGP_LPJ_G0025201.1 mouse_genomes_project 19 57285837 57289725 - Ablim1 protein_coding retained_intron MGP_LPJ_T0052085.1 MGP_LPJ_G0025201.1 mouse_genomes_project 19 57305399 57382270 - Ablim1 protein_coding retained_intron MGP_LPJ_T0052086.1 MGP_LPJ_G0025201.1 mouse_genomes_project 19 57321261 57382239 - Ablim1 protein_coding processed_transcript MGP_LPJ_T0052087.1 MGP_LPJ_G0025201.1 mouse_genomes_project 19 57362817 57365792 - Ablim1 protein_coding processed_transcript MGP_LPJ_T0052088.1 MGP_LPJ_G0025201.1 mouse_genomes_project 19 57377825 57383027 - Ablim1 protein_coding processed_transcript MGP_LPJ_T0052089.1 MGP_LPJ_G0025201.1 mouse_genomes_project 19 57378167 57568258 - MGP_LPJ_P0052089 Ablim1 protein_coding protein_coding MGP_LPJ_T0052090.1 MGP_LPJ_G0025201.1 mouse_genomes_project 19 57378407 57431559 - MGP_LPJ_P0052090 Ablim1 protein_coding protein_coding MGP_LPJ_T0052050.1 MGP_LPJ_G0025196.1 mouse_genomes_project 19 56954428 56956916 + MGP_LPJ_P0052050 Adrb1 protein_coding protein_coding MGP_LPJ_T0050329.1 MGP_LPJ_G0024593.1 mouse_genomes_project 19 1704112 1716144 - MGP_LPJ_P0050329 Rbm14 protein_coding protein_coding MGP_LPJ_T0050330.1 MGP_LPJ_G0024593.1 mouse_genomes_project 19 1704465 1716095 - MGP_LPJ_P0050330 Rbm14 protein_coding protein_coding MGP_LPJ_T0050331.1 MGP_LPJ_G0024593.1 mouse_genomes_project 19 1705320 1716022 - MGP_LPJ_P0050331 Rbm14 protein_coding protein_coding MGP_LPJ_T0051803.1 MGP_LPJ_G0025120.1 mouse_genomes_project 19 45271942 45278029 - MGP_LPJ_P0051803 Fgf8 protein_coding protein_coding MGP_LPJ_T0051804.1 MGP_LPJ_G0025120.1 mouse_genomes_project 19 45271957 45278070 - MGP_LPJ_P0051804 Fgf8 protein_coding protein_coding MGP_LPJ_T0051805.1 MGP_LPJ_G0025120.1 mouse_genomes_project 19 45271962 45278028 - MGP_LPJ_P0051805 Fgf8 protein_coding protein_coding MGP_LPJ_T0051806.1 MGP_LPJ_G0025120.1 mouse_genomes_project 19 45272080 45278013 - MGP_LPJ_P0051806 Fgf8 protein_coding protein_coding MGP_LPJ_T0051807.1 MGP_LPJ_G0025120.1 mouse_genomes_project 19 45272115 45277829 - MGP_LPJ_P0051807 Fgf8 protein_coding protein_coding MGP_LPJ_T0051808.1 MGP_LPJ_G0025120.1 mouse_genomes_project 19 45272134 45277829 - MGP_LPJ_P0051808 Fgf8 protein_coding protein_coding MGP_LPJ_T0051055.1 MGP_LPJ_G0024814.1 mouse_genomes_project 19 9167004 9218540 - MGP_LPJ_P0051055 Stx3 protein_coding protein_coding MGP_LPJ_T0051056.1 MGP_LPJ_G0024814.1 mouse_genomes_project 19 9167004 9218030 - MGP_LPJ_P0051056 Stx3 protein_coding protein_coding MGP_LPJ_T0051057.1 MGP_LPJ_G0024814.1 mouse_genomes_project 19 9169372 9218540 - MGP_LPJ_P0051057 Stx3 protein_coding protein_coding MGP_LPJ_T0010339.1 MGP_LPJ_G0008457.1 mouse_genomes_project 19 49556671 49556750 - Gm27935 miRNA miRNA MGP_LPJ_T0050556.1 MGP_LPJ_G0024671.1 mouse_genomes_project 19 3148744 3180018 + Batf2 protein_coding processed_transcript MGP_LPJ_T0050557.1 MGP_LPJ_G0024671.1 mouse_genomes_project 19 3171983 3180021 + MGP_LPJ_P0050557 Batf2 protein_coding protein_coding MGP_LPJ_T0050558.1 MGP_LPJ_G0024671.1 mouse_genomes_project 19 3171998 3179313 + Batf2 protein_coding retained_intron MGP_LPJ_T0050559.1 MGP_LPJ_G0024671.1 mouse_genomes_project 19 3171998 3178912 + Batf2 protein_coding retained_intron MGP_LPJ_T0050560.1 MGP_LPJ_G0024671.1 mouse_genomes_project 19 3172004 3179303 + Batf2 protein_coding processed_transcript MGP_LPJ_T0050561.1 MGP_LPJ_G0024671.1 mouse_genomes_project 19 3172033 3178912 + Batf2 protein_coding retained_intron MGP_LPJ_T0017645.1 MGP_LPJ_G0015297.1 mouse_genomes_project 19 7498383 7502400 + Gm10143 processed_transcript processed_transcript MGP_LPJ_T0017646.1 MGP_LPJ_G0015297.1 mouse_genomes_project 19 7499204 7502398 + Gm10143 processed_transcript processed_transcript MGP_LPJ_T0050845.1 MGP_LPJ_G0024734.1 mouse_genomes_project 19 5990718 6005458 + MGP_LPJ_P0050845 Hnrnpul2 protein_coding protein_coding MGP_LPJ_T0050926.1 MGP_LPJ_G0024766.1 mouse_genomes_project 19 7761781 7763857 - MGP_LPJ_P0050926 Lrrc10b protein_coding protein_coding MGP_LPJ_T0007081.1 MGP_LPJ_G0005819.1 mouse_genomes_project 19 8816081 8818695 + Gm37387 lincRNA lincRNA MGP_LPJ_T0050460.1 MGP_LPJ_G0024645.1 mouse_genomes_project 19 2688959 2692585 - MGP_LPJ_P0050460 Sssca1 protein_coding nonsense_mediated_decay MGP_LPJ_T0050461.1 MGP_LPJ_G0024645.1 mouse_genomes_project 19 2691174 2692593 - MGP_LPJ_P0050461 Sssca1 protein_coding protein_coding MGP_LPJ_T0050462.1 MGP_LPJ_G0024645.1 mouse_genomes_project 19 2691178 2692532 - Sssca1 protein_coding retained_intron MGP_LPJ_T0050463.1 MGP_LPJ_G0024645.1 mouse_genomes_project 19 2691178 2692604 - MGP_LPJ_P0050463 Sssca1 protein_coding protein_coding MGP_LPJ_T0050464.1 MGP_LPJ_G0024645.1 mouse_genomes_project 19 2691282 2692347 - MGP_LPJ_P0050464 Sssca1 protein_coding protein_coding MGP_LPJ_T0050465.1 MGP_LPJ_G0024645.1 mouse_genomes_project 19 2691763 2692571 - Sssca1 protein_coding retained_intron MGP_LPJ_T0013336.1 MGP_LPJ_G0011427.1 mouse_genomes_project 19 3160377 3160863 + processed_pseudogene processed_pseudogene MGP_LPJ_T0100548.1 MGP_LPJ_G0038811.1 mouse_genomes_project 19 34112957 34113089 + Gm24006 snoRNA snoRNA MGP_LPJ_T0051403.1 MGP_LPJ_G0024971.1 mouse_genomes_project 19 31828933 32087817 - MGP_LPJ_P0051403 Rnls protein_coding protein_coding MGP_LPJ_T0051404.1 MGP_LPJ_G0024971.1 mouse_genomes_project 19 31828933 32087787 - MGP_LPJ_P0051404 Rnls protein_coding protein_coding MGP_LPJ_T0011490.1 MGP_LPJ_G0009608.1 mouse_genomes_project 19 14832145 14832552 - Gm27970 misc_RNA misc_RNA MGP_LPJ_T0051774.1 MGP_LPJ_G0025110.1 mouse_genomes_project 19 44493315 44511653 + MGP_LPJ_P0051774 Lzts2 protein_coding protein_coding MGP_LPJ_T0051775.1 MGP_LPJ_G0025110.1 mouse_genomes_project 19 44493349 44511653 + MGP_LPJ_P0051775 Lzts2 protein_coding protein_coding MGP_LPJ_T0051776.1 MGP_LPJ_G0025110.1 mouse_genomes_project 19 44498023 44511653 + MGP_LPJ_P0051776 Lzts2 protein_coding protein_coding MGP_LPJ_T0013337.1 MGP_LPJ_G0011428.1 mouse_genomes_project 19 4662757 4663264 + processed_pseudogene processed_pseudogene MGP_LPJ_T0051203.1 MGP_LPJ_G0024907.1 mouse_genomes_project 19 19583094 19661193 - MGP_LPJ_P0051203 1110059E24Rik protein_coding protein_coding MGP_LPJ_T0051204.1 MGP_LPJ_G0024907.1 mouse_genomes_project 19 19599493 19661265 - MGP_LPJ_P0051204 1110059E24Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0051205.1 MGP_LPJ_G0024907.1 mouse_genomes_project 19 19600782 19636999 - MGP_LPJ_P0051205 1110059E24Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0051206.1 MGP_LPJ_G0024907.1 mouse_genomes_project 19 19600802 19661173 - MGP_LPJ_P0051206 1110059E24Rik protein_coding protein_coding MGP_LPJ_T0051207.1 MGP_LPJ_G0024907.1 mouse_genomes_project 19 19600937 19661382 - MGP_LPJ_P0051207 1110059E24Rik protein_coding protein_coding MGP_LPJ_T0051208.1 MGP_LPJ_G0024907.1 mouse_genomes_project 19 19601426 19607168 - 1110059E24Rik protein_coding processed_transcript MGP_LPJ_T0051209.1 MGP_LPJ_G0024907.1 mouse_genomes_project 19 19601438 19661075 - MGP_LPJ_P0051209 1110059E24Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0051210.1 MGP_LPJ_G0024907.1 mouse_genomes_project 19 19619928 19661258 - 1110059E24Rik protein_coding retained_intron MGP_LPJ_T0050981.1 MGP_LPJ_G0024788.1 mouse_genomes_project 19 8312400 8327344 - MGP_LPJ_P0050981 Ms4a15 protein_coding protein_coding MGP_LPJ_T0050982.1 MGP_LPJ_G0024788.1 mouse_genomes_project 19 8317266 8327275 - MGP_LPJ_P0050982 Ms4a15 protein_coding protein_coding MGP_LPJ_T0050983.1 MGP_LPJ_G0024788.1 mouse_genomes_project 19 8317352 8327324 - MGP_LPJ_P0050983 Ms4a15 protein_coding protein_coding MGP_LPJ_T0010310.1 MGP_LPJ_G0008428.1 mouse_genomes_project 19 6434019 6434101 - Gm24543 miRNA miRNA MGP_LPJ_T0017669.1 MGP_LPJ_G0015305.1 mouse_genomes_project 19 42115485 42119285 + Gm16244 processed_transcript processed_transcript MGP_LPJ_T0017670.1 MGP_LPJ_G0015305.1 mouse_genomes_project 19 42115563 42116717 + Gm16244 processed_transcript processed_transcript MGP_LPJ_T0051407.1 MGP_LPJ_G0024974.1 mouse_genomes_project 19 32157531 32259446 - MGP_LPJ_P0051407 Lipo4 protein_coding protein_coding MGP_LPJ_T0051408.1 MGP_LPJ_G0024974.1 mouse_genomes_project 19 32158515 32259452 - MGP_LPJ_P0051408 Lipo4 protein_coding protein_coding MGP_LPJ_T0099295.1 MGP_LPJ_G0037558.1 mouse_genomes_project 19 24551744 24551869 - Gm25176 snRNA snRNA MGP_LPJ_T0100536.1 MGP_LPJ_G0038799.1 mouse_genomes_project 19 5886025 5886151 + Snord22 snoRNA snoRNA MGP_LPJ_T0050676.1 MGP_LPJ_G0024686.1 mouse_genomes_project 19 3773162 3797145 - MGP_LPJ_P0050676 Ccdc88b protein_coding protein_coding MGP_LPJ_T0051223.1 MGP_LPJ_G0024913.1 mouse_genomes_project 19 21395597 21553180 - MGP_LPJ_P0051223 Mamdc2 protein_coding protein_coding MGP_LPJ_T0050785.1 MGP_LPJ_G0024724.1 mouse_genomes_project 19 5817973 5832375 + MGP_LPJ_P0050785 Chrm1 protein_coding protein_coding MGP_LPJ_T0050786.1 MGP_LPJ_G0024724.1 mouse_genomes_project 19 5818198 5837806 + MGP_LPJ_P0050786 Chrm1 protein_coding protein_coding MGP_LPJ_T0050787.1 MGP_LPJ_G0024724.1 mouse_genomes_project 19 5818198 5835788 + MGP_LPJ_P0050787 Chrm1 protein_coding protein_coding MGP_LPJ_T0010334.1 MGP_LPJ_G0008452.1 mouse_genomes_project 19 44269691 44269815 + Mir6405 miRNA miRNA MGP_LPJ_T0098407.1 MGP_LPJ_G0036688.1 mouse_genomes_project 19 9086265 9086404 + Gm26183 scaRNA scaRNA MGP_LPJ_T0051397.1 MGP_LPJ_G0024968.1 mouse_genomes_project 19 31259973 31321526 + MGP_LPJ_P0051397 Papss2 protein_coding protein_coding MGP_LPJ_T0051398.1 MGP_LPJ_G0024968.1 mouse_genomes_project 19 31260140 31319906 + MGP_LPJ_P0051398 Papss2 protein_coding unknown_likely_coding MGP_LPJ_T0051725.1 MGP_LPJ_G0025091.1 mouse_genomes_project 19 43443523 43480697 - MGP_LPJ_P0051725 Erlin1 protein_coding protein_coding MGP_LPJ_T0051726.1 MGP_LPJ_G0025091.1 mouse_genomes_project 19 43443523 43480946 - MGP_LPJ_P0051726 Erlin1 protein_coding protein_coding MGP_LPJ_T0051727.1 MGP_LPJ_G0025091.1 mouse_genomes_project 19 43443523 43480956 - MGP_LPJ_P0051727 Erlin1 protein_coding protein_coding MGP_LPJ_T0051728.1 MGP_LPJ_G0025091.1 mouse_genomes_project 19 43465215 43480927 - MGP_LPJ_P0051728 Erlin1 protein_coding protein_coding MGP_LPJ_T0051729.1 MGP_LPJ_G0025091.1 mouse_genomes_project 19 43469158 43480566 - MGP_LPJ_P0051729 Erlin1 protein_coding nonsense_mediated_decay MGP_LPJ_T0051730.1 MGP_LPJ_G0025091.1 mouse_genomes_project 19 43469160 43478859 - MGP_LPJ_P0051730 Erlin1 protein_coding protein_coding MGP_LPJ_T0051731.1 MGP_LPJ_G0025091.1 mouse_genomes_project 19 43477238 43480915 - Erlin1 protein_coding retained_intron MGP_LPJ_T0051732.1 MGP_LPJ_G0025091.1 mouse_genomes_project 19 43478648 43480867 - Erlin1 protein_coding retained_intron MGP_LPJ_T0051733.1 MGP_LPJ_G0025091.1 mouse_genomes_project 19 43480486 43480861 - MGP_LPJ_P0051733 Erlin1 protein_coding protein_coding MGP_LPJ_T0050425.1 MGP_LPJ_G0024631.1 mouse_genomes_project 19 2441151 2444696 + MGP_LPJ_P0050425 Cfl1 protein_coding protein_coding MGP_LPJ_T0100551.1 MGP_LPJ_G0038814.1 mouse_genomes_project 19 42027485 42027611 - Gm25216 snoRNA snoRNA MGP_LPJ_T0050592.1 MGP_LPJ_G0024679.1 mouse_genomes_project 19 3357333 3374381 + Map4k2 protein_coding retained_intron MGP_LPJ_T0050593.1 MGP_LPJ_G0024679.1 mouse_genomes_project 19 3357353 3358855 + MGP_LPJ_P0050593 Map4k2 protein_coding nonsense_mediated_decay MGP_LPJ_T0050594.1 MGP_LPJ_G0024679.1 mouse_genomes_project 19 3357358 3374384 + MGP_LPJ_P0050594 Map4k2 protein_coding protein_coding MGP_LPJ_T0050595.1 MGP_LPJ_G0024679.1 mouse_genomes_project 19 3357389 3358195 + Map4k2 protein_coding processed_transcript MGP_LPJ_T0050596.1 MGP_LPJ_G0024679.1 mouse_genomes_project 19 3357406 3374070 + MGP_LPJ_P0050596 Map4k2 protein_coding nonsense_mediated_decay MGP_LPJ_T0050597.1 MGP_LPJ_G0024679.1 mouse_genomes_project 19 3357414 3359073 + Map4k2 protein_coding retained_intron MGP_LPJ_T0050598.1 MGP_LPJ_G0024679.1 mouse_genomes_project 19 3357422 3364512 + MGP_LPJ_P0050598 Map4k2 protein_coding protein_coding MGP_LPJ_T0050599.1 MGP_LPJ_G0024679.1 mouse_genomes_project 19 3357448 3372296 + MGP_LPJ_P0050599 Map4k2 protein_coding nonsense_mediated_decay MGP_LPJ_T0050600.1 MGP_LPJ_G0024679.1 mouse_genomes_project 19 3357468 3359722 + Map4k2 protein_coding retained_intron MGP_LPJ_T0050601.1 MGP_LPJ_G0024679.1 mouse_genomes_project 19 3357616 3362628 + Map4k2 protein_coding processed_transcript MGP_LPJ_T0050602.1 MGP_LPJ_G0024679.1 mouse_genomes_project 19 3357647 3359720 + Map4k2 protein_coding processed_transcript MGP_LPJ_T0050603.1 MGP_LPJ_G0024679.1 mouse_genomes_project 19 3357669 3359720 + Map4k2 protein_coding retained_intron MGP_LPJ_T0050604.1 MGP_LPJ_G0024679.1 mouse_genomes_project 19 3357977 3370657 + Map4k2 protein_coding retained_intron MGP_LPJ_T0050605.1 MGP_LPJ_G0024679.1 mouse_genomes_project 19 3358735 3359044 + Map4k2 protein_coding retained_intron MGP_LPJ_T0050606.1 MGP_LPJ_G0024679.1 mouse_genomes_project 19 3359714 3363417 + Map4k2 protein_coding retained_intron MGP_LPJ_T0050607.1 MGP_LPJ_G0024679.1 mouse_genomes_project 19 3364119 3365063 + Map4k2 protein_coding retained_intron MGP_LPJ_T0050608.1 MGP_LPJ_G0024679.1 mouse_genomes_project 19 3365318 3372609 + Map4k2 protein_coding retained_intron MGP_LPJ_T0050609.1 MGP_LPJ_G0024679.1 mouse_genomes_project 19 3365438 3370429 + Map4k2 protein_coding processed_transcript MGP_LPJ_T0050610.1 MGP_LPJ_G0024679.1 mouse_genomes_project 19 3365461 3372607 + MGP_LPJ_P0050610 Map4k2 protein_coding nonsense_mediated_decay MGP_LPJ_T0050611.1 MGP_LPJ_G0024679.1 mouse_genomes_project 19 3369678 3370350 + Map4k2 protein_coding retained_intron MGP_LPJ_T0050612.1 MGP_LPJ_G0024679.1 mouse_genomes_project 19 3371388 3374211 + Map4k2 protein_coding processed_transcript MGP_LPJ_T0050613.1 MGP_LPJ_G0024679.1 mouse_genomes_project 19 3371543 3372402 + Map4k2 protein_coding processed_transcript MGP_LPJ_T0003853.1 MGP_LPJ_G0003458.1 mouse_genomes_project 19 1705055 1709328 + Gm21844 antisense antisense MGP_LPJ_T0017647.1 MGP_LPJ_G0015298.1 mouse_genomes_project 19 8060374 8109511 + A430093F15Rik processed_transcript lincRNA MGP_LPJ_T0017648.1 MGP_LPJ_G0015298.1 mouse_genomes_project 19 8060378 8109502 + A430093F15Rik processed_transcript lincRNA MGP_LPJ_T0017649.1 MGP_LPJ_G0015298.1 mouse_genomes_project 19 8060387 8109145 + A430093F15Rik processed_transcript lincRNA MGP_LPJ_T0017650.1 MGP_LPJ_G0015298.1 mouse_genomes_project 19 8069909 8079126 + A430093F15Rik processed_transcript retained_intron MGP_LPJ_T0017651.1 MGP_LPJ_G0015298.1 mouse_genomes_project 19 8105382 8109507 + A430093F15Rik processed_transcript lincRNA MGP_LPJ_T0017652.1 MGP_LPJ_G0015298.1 mouse_genomes_project 19 8108819 8109504 + A430093F15Rik processed_transcript retained_intron MGP_LPJ_T0007082.1 MGP_LPJ_G0005820.1 mouse_genomes_project 19 13688342 13719888 + C130060C02Rik lincRNA lincRNA MGP_LPJ_T0050125.1 MGP_LPJ_G0024545.1 mouse_genomes_project 19 213216 339092 - MGP_LPJ_P0050125 Ppp6r3 protein_coding unknown_likely_coding MGP_LPJ_T0050126.1 MGP_LPJ_G0024545.1 mouse_genomes_project 19 213220 339008 - MGP_LPJ_P0050126 Ppp6r3 protein_coding protein_coding MGP_LPJ_T0050127.1 MGP_LPJ_G0024545.1 mouse_genomes_project 19 213220 339008 - MGP_LPJ_P0050127 Ppp6r3 protein_coding protein_coding MGP_LPJ_T0050128.1 MGP_LPJ_G0024545.1 mouse_genomes_project 19 213220 339008 - MGP_LPJ_P0050128 Ppp6r3 protein_coding protein_coding MGP_LPJ_T0050529.1 MGP_LPJ_G0024663.1 mouse_genomes_project 19 3084395 3089703 - MGP_LPJ_P0050529 Gm28374 protein_coding protein_coding MGP_LPJ_T0100552.1 MGP_LPJ_G0038815.1 mouse_genomes_project 19 43524966 43525112 - Gm24336 snoRNA snoRNA MGP_LPJ_T0051445.1 MGP_LPJ_G0024996.1 mouse_genomes_project 19 34901043 34998517 - MGP_LPJ_P0051445 Htr7 protein_coding nonsense_mediated_decay MGP_LPJ_T0051446.1 MGP_LPJ_G0024996.1 mouse_genomes_project 19 34901043 34998517 - MGP_LPJ_P0051446 Htr7 protein_coding nonsense_mediated_decay MGP_LPJ_T0051447.1 MGP_LPJ_G0024996.1 mouse_genomes_project 19 34901043 34998497 - MGP_LPJ_P0051447 Htr7 protein_coding protein_coding MGP_LPJ_T0051448.1 MGP_LPJ_G0024996.1 mouse_genomes_project 19 34901054 34998525 - MGP_LPJ_P0051448 Htr7 protein_coding protein_coding MGP_LPJ_T0051449.1 MGP_LPJ_G0024996.1 mouse_genomes_project 19 34902129 34998664 - MGP_LPJ_P0051449 Htr7 protein_coding nonsense_mediated_decay MGP_LPJ_T0050121.1 MGP_LPJ_G0024542.1 mouse_genomes_project 19 77419 142846 + MGP_LPJ_P0050121 Cpt1a protein_coding protein_coding MGP_LPJ_T0003893.1 MGP_LPJ_G0003486.1 mouse_genomes_project 19 59813116 59848093 - Emx2os antisense antisense MGP_LPJ_T0003880.1 MGP_LPJ_G0003475.1 mouse_genomes_project 19 41861738 41884227 - Gm16541 antisense antisense MGP_LPJ_T0003881.1 MGP_LPJ_G0003475.1 mouse_genomes_project 19 41861744 41884214 - Gm16541 antisense antisense MGP_LPJ_T0003882.1 MGP_LPJ_G0003475.1 mouse_genomes_project 19 41883625 41884227 - Gm16541 antisense antisense MGP_LPJ_T0007119.1 MGP_LPJ_G0005846.1 mouse_genomes_project 19 53045175 53053356 + 1700054A03Rik lincRNA lincRNA MGP_LPJ_T0007120.1 MGP_LPJ_G0005846.1 mouse_genomes_project 19 53045209 53053356 + 1700054A03Rik lincRNA lincRNA MGP_LPJ_T0050210.1 MGP_LPJ_G0024563.1 mouse_genomes_project 19 904678 908777 + MGP_LPJ_P0050210 Cabp2 protein_coding protein_coding MGP_LPJ_T0050211.1 MGP_LPJ_G0024563.1 mouse_genomes_project 19 905588 910437 + MGP_LPJ_P0050211 Cabp2 protein_coding protein_coding MGP_LPJ_T0050212.1 MGP_LPJ_G0024563.1 mouse_genomes_project 19 906590 910441 + MGP_LPJ_P0050212 Cabp2 protein_coding protein_coding MGP_LPJ_T0050213.1 MGP_LPJ_G0024563.1 mouse_genomes_project 19 906619 910441 + MGP_LPJ_P0050213 Cabp2 protein_coding protein_coding MGP_LPJ_T0050214.1 MGP_LPJ_G0024563.1 mouse_genomes_project 19 909575 910438 + Cabp2 protein_coding processed_transcript MGP_LPJ_T0098223.1 MGP_LPJ_G0036504.1 mouse_genomes_project 19 43331135 43331252 + n-R5s21 rRNA rRNA MGP_LPJ_T0098222.1 MGP_LPJ_G0036503.1 mouse_genomes_project 19 42501027 42501135 - Gm22135 rRNA rRNA MGP_LPJ_T0100546.1 MGP_LPJ_G0038809.1 mouse_genomes_project 19 23381474 23381606 - Gm24252 snoRNA snoRNA MGP_LPJ_T0051822.1 MGP_LPJ_G0025124.1 mouse_genomes_project 19 45354480 45557112 - MGP_LPJ_P0051822 9130011E15Rik protein_coding protein_coding MGP_LPJ_T0050841.1 MGP_LPJ_G0024733.1 mouse_genomes_project 19 5980392 5990651 - MGP_LPJ_P0050841 Ttc9c protein_coding protein_coding MGP_LPJ_T0050842.1 MGP_LPJ_G0024733.1 mouse_genomes_project 19 5982453 5990242 - MGP_LPJ_P0050842 Ttc9c protein_coding protein_coding MGP_LPJ_T0050843.1 MGP_LPJ_G0024733.1 mouse_genomes_project 19 5982613 5990612 - MGP_LPJ_P0050843 Ttc9c protein_coding protein_coding MGP_LPJ_T0050844.1 MGP_LPJ_G0024733.1 mouse_genomes_project 19 5989614 5990550 - Ttc9c protein_coding retained_intron MGP_LPJ_T0010341.1 MGP_LPJ_G0008459.1 mouse_genomes_project 19 52975277 52975378 - Mir6407 miRNA miRNA MGP_LPJ_T0051994.1 MGP_LPJ_G0025184.1 mouse_genomes_project 19 55319120 55328026 + MGP_LPJ_P0051994 Tectb protein_coding protein_coding MGP_LPJ_T0051995.1 MGP_LPJ_G0025184.1 mouse_genomes_project 19 55319123 55333226 + MGP_LPJ_P0051995 Tectb protein_coding protein_coding MGP_LPJ_T0051996.1 MGP_LPJ_G0025184.1 mouse_genomes_project 19 55319272 55334669 + MGP_LPJ_P0051996 Tectb protein_coding protein_coding MGP_LPJ_T0051997.1 MGP_LPJ_G0025184.1 mouse_genomes_project 19 55327938 55333051 + MGP_LPJ_P0051997 Tectb protein_coding protein_coding MGP_LPJ_T0051998.1 MGP_LPJ_G0025184.1 mouse_genomes_project 19 55327990 55328685 + Tectb protein_coding retained_intron MGP_LPJ_T0051999.1 MGP_LPJ_G0025184.1 mouse_genomes_project 19 55330393 55334660 + Tectb protein_coding processed_transcript MGP_LPJ_T0050871.1 MGP_LPJ_G0024744.1 mouse_genomes_project 19 6101621 6110692 + MGP_LPJ_P0050871 B3gat3 protein_coding protein_coding MGP_LPJ_T0051074.1 MGP_LPJ_G0024831.1 mouse_genomes_project 19 9961579 9962667 + MGP_LPJ_P0051074 Olfr1441 protein_coding protein_coding MGP_LPJ_T0051547.1 MGP_LPJ_G0025031.1 mouse_genomes_project 19 38769258 38817202 - MGP_LPJ_P0051547 protein_coding protein_coding MGP_LPJ_T0010294.1 MGP_LPJ_G0008412.1 mouse_genomes_project 19 42126 42190 + Mir6984 miRNA miRNA MGP_LPJ_T0051953.1 MGP_LPJ_G0025167.1 mouse_genomes_project 19 47978285 48605770 + MGP_LPJ_P0051953 Sorcs3 protein_coding protein_coding MGP_LPJ_T0050385.1 MGP_LPJ_G0024621.1 mouse_genomes_project 19 2318119 2330819 - MGP_LPJ_P0050385 Sart1 protein_coding protein_coding MGP_LPJ_T0050530.1 MGP_LPJ_G0024664.1 mouse_genomes_project 19 3087479 3088232 + MGP_LPJ_P0050530 Tmem262 protein_coding protein_coding MGP_LPJ_T0050531.1 MGP_LPJ_G0024664.1 mouse_genomes_project 19 3087479 3088235 + MGP_LPJ_P0050531 Tmem262 protein_coding protein_coding MGP_LPJ_T0051846.1 MGP_LPJ_G0025129.1 mouse_genomes_project 19 45714466 45718561 + MGP_LPJ_P0051846 Elovl3 protein_coding protein_coding MGP_LPJ_T0051396.1 MGP_LPJ_G0024967.1 mouse_genomes_project 19 31121043 31150068 + MGP_LPJ_P0051396 Minpp1 protein_coding protein_coding MGP_LPJ_T0011493.1 MGP_LPJ_G0009611.1 mouse_genomes_project 19 28771512 28771795 + Gm24883 misc_RNA misc_RNA MGP_LPJ_T0051771.1 MGP_LPJ_G0025107.1 mouse_genomes_project 19 44465653 44479748 + MGP_LPJ_P0051771 Sema4g protein_coding unknown_likely_coding MGP_LPJ_T0050985.1 MGP_LPJ_G0024790.1 mouse_genomes_project 19 8407763 8421643 - MGP_LPJ_P0050985 Ms4a8a protein_coding protein_coding MGP_LPJ_T0050986.1 MGP_LPJ_G0024790.1 mouse_genomes_project 19 8416107 8421643 - Ms4a8a protein_coding retained_intron MGP_LPJ_T0050936.1 MGP_LPJ_G0024771.1 mouse_genomes_project 19 7883158 7890030 - MGP_LPJ_P0050936 Tmem138 protein_coding protein_coding MGP_LPJ_T0050300.1 MGP_LPJ_G0024583.1 mouse_genomes_project 19 1326771 1362546 - MGP_LPJ_P0050300 Syt12 protein_coding protein_coding MGP_LPJ_T0050301.1 MGP_LPJ_G0024583.1 mouse_genomes_project 19 1328573 1335569 - Syt12 protein_coding processed_transcript MGP_LPJ_T0050302.1 MGP_LPJ_G0024583.1 mouse_genomes_project 19 1340208 1362229 - MGP_LPJ_P0050302 Syt12 protein_coding protein_coding MGP_LPJ_T0050303.1 MGP_LPJ_G0024583.1 mouse_genomes_project 19 1349411 1362259 - Syt12 protein_coding retained_intron MGP_LPJ_T0050704.1 MGP_LPJ_G0024696.1 mouse_genomes_project 19 3935768 3938488 - MGP_LPJ_P0050704 Fkbp2 protein_coding protein_coding MGP_LPJ_T0050705.1 MGP_LPJ_G0024696.1 mouse_genomes_project 19 3935768 3938467 - MGP_LPJ_P0050705 Fkbp2 protein_coding protein_coding MGP_LPJ_T0051228.1 MGP_LPJ_G0024918.1 mouse_genomes_project 19 22111158 22173672 - MGP_LPJ_P0051228 Fam189a2 protein_coding protein_coding MGP_LPJ_T0050888.1 MGP_LPJ_G0024750.1 mouse_genomes_project 19 6176494 6276324 + MGP_LPJ_P0050888 Ahnak protein_coding protein_coding MGP_LPJ_T0050889.1 MGP_LPJ_G0024750.1 mouse_genomes_project 19 6192231 6211207 + MGP_LPJ_P0050889 Ahnak protein_coding protein_coding MGP_LPJ_T0051905.1 MGP_LPJ_G0025149.1 mouse_genomes_project 19 46702251 46720736 - MGP_LPJ_P0051905 Pcgf6 protein_coding protein_coding MGP_LPJ_T0051685.1 MGP_LPJ_G0025078.1 mouse_genomes_project 19 42089473 42116433 - MGP_LPJ_P0051685 Hps1 protein_coding protein_coding MGP_LPJ_T0051686.1 MGP_LPJ_G0025078.1 mouse_genomes_project 19 42089563 42116414 - Hps1 protein_coding retained_intron MGP_LPJ_T0051687.1 MGP_LPJ_G0025078.1 mouse_genomes_project 19 42089563 42115101 - MGP_LPJ_P0051687 Hps1 protein_coding protein_coding MGP_LPJ_T0051688.1 MGP_LPJ_G0025078.1 mouse_genomes_project 19 42089565 42116431 - MGP_LPJ_P0051688 Hps1 protein_coding protein_coding MGP_LPJ_T0051689.1 MGP_LPJ_G0025078.1 mouse_genomes_project 19 42089949 42092181 - MGP_LPJ_P0051689 Hps1 protein_coding nonsense_mediated_decay MGP_LPJ_T0051690.1 MGP_LPJ_G0025078.1 mouse_genomes_project 19 42092432 42116420 - MGP_LPJ_P0051690 Hps1 protein_coding protein_coding MGP_LPJ_T0051691.1 MGP_LPJ_G0025078.1 mouse_genomes_project 19 42092832 42114716 - MGP_LPJ_P0051691 Hps1 protein_coding protein_coding MGP_LPJ_T0051692.1 MGP_LPJ_G0025078.1 mouse_genomes_project 19 42094717 42098230 - Hps1 protein_coding retained_intron MGP_LPJ_T0051693.1 MGP_LPJ_G0025078.1 mouse_genomes_project 19 42103307 42106309 - Hps1 protein_coding retained_intron MGP_LPJ_T0051010.1 MGP_LPJ_G0024799.1 mouse_genomes_project 19 8724984 8742301 + MGP_LPJ_P0051010 Ms4a4a protein_coding protein_coding MGP_LPJ_T0052147.1 MGP_LPJ_G0025229.1 mouse_genomes_project 19 61489376 61575925 - MGP_LPJ_P0052147 Zfp950 protein_coding nonsense_mediated_decay MGP_LPJ_T0052148.1 MGP_LPJ_G0025229.1 mouse_genomes_project 19 61551185 61575970 - MGP_LPJ_P0052148 Zfp950 protein_coding nonsense_mediated_decay MGP_LPJ_T0052149.1 MGP_LPJ_G0025229.1 mouse_genomes_project 19 61552742 61553577 - Zfp950 protein_coding retained_intron MGP_LPJ_T0052150.1 MGP_LPJ_G0025229.1 mouse_genomes_project 19 61553327 61575947 - MGP_LPJ_P0052150 Zfp950 protein_coding protein_coding MGP_LPJ_T0052151.1 MGP_LPJ_G0025229.1 mouse_genomes_project 19 61553346 61575949 - MGP_LPJ_P0052151 Zfp950 protein_coding nonsense_mediated_decay MGP_LPJ_T0052152.1 MGP_LPJ_G0025229.1 mouse_genomes_project 19 61553477 61575900 - MGP_LPJ_P0052152 Zfp950 protein_coding nonsense_mediated_decay MGP_LPJ_T0052153.1 MGP_LPJ_G0025229.1 mouse_genomes_project 19 61554335 61575892 - MGP_LPJ_P0052153 Zfp950 protein_coding protein_coding MGP_LPJ_T0052154.1 MGP_LPJ_G0025229.1 mouse_genomes_project 19 61555639 61555810 - MGP_LPJ_P0052154 Zfp950 protein_coding protein_coding MGP_LPJ_T0052155.1 MGP_LPJ_G0025229.1 mouse_genomes_project 19 61558371 61575920 - MGP_LPJ_P0052155 Zfp950 protein_coding protein_coding MGP_LPJ_T0052156.1 MGP_LPJ_G0025229.1 mouse_genomes_project 19 61562691 61563267 - MGP_LPJ_P0052156 Zfp950 protein_coding protein_coding MGP_LPJ_T0050717.1 MGP_LPJ_G0024704.1 mouse_genomes_project 19 4062215 4075823 - MGP_LPJ_P0050717 Flrt1 protein_coding protein_coding MGP_LPJ_T0050890.1 MGP_LPJ_G0024751.1 mouse_genomes_project 19 6283034 6287347 - MGP_LPJ_P0050890 Scgb1a1 protein_coding protein_coding MGP_LPJ_T0050964.1 MGP_LPJ_G0024783.1 mouse_genomes_project 19 8223981 8234283 + MGP_LPJ_P0050964 Prpf19 protein_coding protein_coding MGP_LPJ_T0050965.1 MGP_LPJ_G0024783.1 mouse_genomes_project 19 8224027 8226662 + Prpf19 protein_coding retained_intron MGP_LPJ_T0050966.1 MGP_LPJ_G0024783.1 mouse_genomes_project 19 8224032 8227011 + Prpf19 protein_coding retained_intron MGP_LPJ_T0050967.1 MGP_LPJ_G0024783.1 mouse_genomes_project 19 8224123 8228118 + Prpf19 protein_coding retained_intron MGP_LPJ_T0050968.1 MGP_LPJ_G0024783.1 mouse_genomes_project 19 8224164 8240027 + MGP_LPJ_P0050968 Prpf19 protein_coding protein_coding MGP_LPJ_T0050969.1 MGP_LPJ_G0024783.1 mouse_genomes_project 19 8227395 8234257 + Prpf19 protein_coding processed_transcript MGP_LPJ_T0050970.1 MGP_LPJ_G0024783.1 mouse_genomes_project 19 8228119 8231511 + Prpf19 protein_coding retained_intron MGP_LPJ_T0050971.1 MGP_LPJ_G0024783.1 mouse_genomes_project 19 8229032 8229744 + Prpf19 protein_coding retained_intron MGP_LPJ_T0051166.1 MGP_LPJ_G0024893.1 mouse_genomes_project 19 15228819 15655610 - MGP_LPJ_P0051166 Pcsk5 protein_coding protein_coding MGP_LPJ_T0051167.1 MGP_LPJ_G0024893.1 mouse_genomes_project 19 15358552 15655610 - MGP_LPJ_P0051167 Pcsk5 protein_coding protein_coding MGP_LPJ_T0051168.1 MGP_LPJ_G0024893.1 mouse_genomes_project 19 15361107 15655134 - MGP_LPJ_P0051168 Pcsk5 protein_coding unknown_likely_coding MGP_LPJ_T0051948.1 MGP_LPJ_G0025165.1 mouse_genomes_project 19 47609596 47633066 + MGP_LPJ_P0051948 Gsto2 protein_coding protein_coding MGP_LPJ_T0051949.1 MGP_LPJ_G0025165.1 mouse_genomes_project 19 47609818 47633066 + MGP_LPJ_P0051949 Gsto2 protein_coding protein_coding MGP_LPJ_T0051950.1 MGP_LPJ_G0025165.1 mouse_genomes_project 19 47614301 47631447 + MGP_LPJ_P0051950 Gsto2 protein_coding protein_coding MGP_LPJ_T0050215.1 MGP_LPJ_G0024564.1 mouse_genomes_project 19 925557 927176 + Cdk2ap2 protein_coding retained_intron MGP_LPJ_T0050216.1 MGP_LPJ_G0024564.1 mouse_genomes_project 19 925557 926622 + MGP_LPJ_P0050216 Cdk2ap2 protein_coding protein_coding MGP_LPJ_T0050217.1 MGP_LPJ_G0024564.1 mouse_genomes_project 19 925558 927167 + MGP_LPJ_P0050217 Cdk2ap2 protein_coding nonsense_mediated_decay MGP_LPJ_T0050218.1 MGP_LPJ_G0024564.1 mouse_genomes_project 19 925582 927174 + MGP_LPJ_P0050218 Cdk2ap2 protein_coding protein_coding MGP_LPJ_T0051221.1 MGP_LPJ_G0024912.1 mouse_genomes_project 19 21287565 21365167 - MGP_LPJ_P0051221 Smc5 protein_coding protein_coding MGP_LPJ_T0051222.1 MGP_LPJ_G0024912.1 mouse_genomes_project 19 21289952 21296705 - MGP_LPJ_P0051222 Smc5 protein_coding unknown_likely_coding MGP_LPJ_T0051243.1 MGP_LPJ_G0024927.1 mouse_genomes_project 19 23205244 23418729 + MGP_LPJ_P0051243 Dock8 protein_coding protein_coding MGP_LPJ_T0051850.1 MGP_LPJ_G0025131.1 mouse_genomes_project 19 45736991 45875270 + MGP_LPJ_P0051850 Gbf1 protein_coding protein_coding MGP_LPJ_T0051851.1 MGP_LPJ_G0025131.1 mouse_genomes_project 19 45737012 45844009 + Gbf1 protein_coding retained_intron MGP_LPJ_T0051852.1 MGP_LPJ_G0025131.1 mouse_genomes_project 19 45737030 45856201 + Gbf1 protein_coding retained_intron MGP_LPJ_T0051853.1 MGP_LPJ_G0025131.1 mouse_genomes_project 19 45737055 45834435 + Gbf1 protein_coding processed_transcript MGP_LPJ_T0051854.1 MGP_LPJ_G0025131.1 mouse_genomes_project 19 45834335 45875269 + MGP_LPJ_P0051854 Gbf1 protein_coding protein_coding MGP_LPJ_T0051855.1 MGP_LPJ_G0025131.1 mouse_genomes_project 19 45842078 45847778 + MGP_LPJ_P0051855 Gbf1 protein_coding protein_coding MGP_LPJ_T0051857.1 MGP_LPJ_G0025131.1 mouse_genomes_project 19 45856807 45858722 + Gbf1 protein_coding processed_transcript MGP_LPJ_T0051858.1 MGP_LPJ_G0025131.1 mouse_genomes_project 19 45857728 45861392 + Gbf1 protein_coding retained_intron MGP_LPJ_T0051859.1 MGP_LPJ_G0025131.1 mouse_genomes_project 19 45868632 45869769 + Gbf1 protein_coding retained_intron MGP_LPJ_T0051860.1 MGP_LPJ_G0025131.1 mouse_genomes_project 19 45868939 45872442 + MGP_LPJ_P0051860 Gbf1 protein_coding nonsense_mediated_decay MGP_LPJ_T0051861.1 MGP_LPJ_G0025131.1 mouse_genomes_project 19 45869094 45872245 + Gbf1 protein_coding retained_intron MGP_LPJ_T0051862.1 MGP_LPJ_G0025131.1 mouse_genomes_project 19 45871602 45872786 + Gbf1 protein_coding processed_transcript MGP_LPJ_T0051863.1 MGP_LPJ_G0025131.1 mouse_genomes_project 19 45871760 45872700 + Gbf1 protein_coding retained_intron MGP_LPJ_T0051864.1 MGP_LPJ_G0025131.1 mouse_genomes_project 19 45873322 45874740 + Gbf1 protein_coding retained_intron MGP_LPJ_T0051624.1 MGP_LPJ_G0025057.1 mouse_genomes_project 19 41135710 41137865 - MGP_LPJ_P0051624 Frat2 protein_coding protein_coding MGP_LPJ_T0051220.1 MGP_LPJ_G0024911.1 mouse_genomes_project 19 21221462 21248119 + MGP_LPJ_P0051220 Klf9 protein_coding protein_coding MGP_LPJ_T0017626.1 MGP_LPJ_G0015295.1 mouse_genomes_project 19 3653707 3720902 - 2410152P15Rik processed_transcript processed_transcript MGP_LPJ_T0010308.1 MGP_LPJ_G0008426.1 mouse_genomes_project 19 5903363 5903472 + Mir6992 miRNA miRNA MGP_LPJ_T0050337.1 MGP_LPJ_G0024598.1 mouse_genomes_project 19 1790827 1797557 + Zdhhc24 protein_coding processed_transcript MGP_LPJ_T0050338.1 MGP_LPJ_G0024598.1 mouse_genomes_project 19 1790831 1797557 + MGP_LPJ_P0050338 Zdhhc24 protein_coding protein_coding MGP_LPJ_T0050339.1 MGP_LPJ_G0024598.1 mouse_genomes_project 19 1790849 1797555 + Zdhhc24 protein_coding processed_transcript MGP_LPJ_T0050340.1 MGP_LPJ_G0024598.1 mouse_genomes_project 19 1790863 1797556 + MGP_LPJ_P0050340 Zdhhc24 protein_coding nonsense_mediated_decay MGP_LPJ_T0050341.1 MGP_LPJ_G0024598.1 mouse_genomes_project 19 1790882 1795959 + MGP_LPJ_P0050341 Zdhhc24 protein_coding nonsense_mediated_decay MGP_LPJ_T0050342.1 MGP_LPJ_G0024598.1 mouse_genomes_project 19 1791926 1795942 + Zdhhc24 protein_coding processed_transcript MGP_LPJ_T0051282.1 MGP_LPJ_G0024935.1 mouse_genomes_project 19 25670309 25684881 + MGP_LPJ_P0051282 Kcnv2 protein_coding protein_coding MGP_LPJ_T0051011.1 MGP_LPJ_G0024800.1 mouse_genomes_project 19 8754280 8765881 + MGP_LPJ_P0051011 Ms4a4c protein_coding protein_coding MGP_LPJ_T0051012.1 MGP_LPJ_G0024800.1 mouse_genomes_project 19 8757171 8776918 + MGP_LPJ_P0051012 Ms4a4c protein_coding protein_coding MGP_LPJ_T0051013.1 MGP_LPJ_G0024800.1 mouse_genomes_project 19 8764302 8776140 + MGP_LPJ_P0051013 Ms4a4c protein_coding protein_coding MGP_LPJ_T0051109.1 MGP_LPJ_G0024851.1 mouse_genomes_project 19 10585548 10586481 + MGP_LPJ_P0051109 Olfr1451 protein_coding protein_coding MGP_LPJ_T0013358.1 MGP_LPJ_G0011449.1 mouse_genomes_project 19 28658652 28659030 + processed_pseudogene processed_pseudogene MGP_LPJ_T0051431.1 MGP_LPJ_G0024987.1 mouse_genomes_project 19 33374127 33400655 + MGP_LPJ_P0051431 Ifit2 protein_coding protein_coding MGP_LPJ_T0051432.1 MGP_LPJ_G0024987.1 mouse_genomes_project 19 33374143 33404103 + MGP_LPJ_P0051432 Ifit2 protein_coding protein_coding MGP_LPJ_T0052049.1 MGP_LPJ_G0025195.1 mouse_genomes_project 19 56766155 56817590 + MGP_LPJ_P0052049 Nhlrc2 protein_coding protein_coding MGP_LPJ_T0010316.1 MGP_LPJ_G0008434.1 mouse_genomes_project 19 20782182 20782250 + Mir204 miRNA miRNA MGP_LPJ_T0050675.1 MGP_LPJ_G0024685.1 mouse_genomes_project 19 3757755 3769141 - MGP_LPJ_P0050675 Rps6ka4 protein_coding protein_coding MGP_LPJ_T0099302.1 MGP_LPJ_G0037565.1 mouse_genomes_project 19 43251959 43252066 - Gm24400 snRNA snRNA MGP_LPJ_T0099304.1 MGP_LPJ_G0037567.1 mouse_genomes_project 19 46728687 46728794 + Gm23140 snRNA snRNA MGP_LPJ_T0051549.1 MGP_LPJ_G0025033.1 mouse_genomes_project 19 38769258 39092267 - MGP_LPJ_P0051549 protein_coding protein_coding MGP_LPJ_T0010304.1 MGP_LPJ_G0008422.1 mouse_genomes_project 19 3598116 3598242 + Gm26460 miRNA miRNA MGP_LPJ_T0010326.1 MGP_LPJ_G0008444.1 mouse_genomes_project 19 34191969 34192039 - Gm23075 miRNA miRNA MGP_LPJ_T0050553.1 MGP_LPJ_G0024670.1 mouse_genomes_project 19 3141857 3148902 - Arl2 protein_coding retained_intron MGP_LPJ_T0050554.1 MGP_LPJ_G0024670.1 mouse_genomes_project 19 3141866 3149168 - MGP_LPJ_P0050554 Arl2 protein_coding protein_coding MGP_LPJ_T0050555.1 MGP_LPJ_G0024670.1 mouse_genomes_project 19 3144953 3145644 - Arl2 protein_coding retained_intron MGP_LPJ_T0051870.1 MGP_LPJ_G0025134.1 mouse_genomes_project 19 45919862 45922132 + MGP_LPJ_P0051870 Fbxl15 protein_coding protein_coding MGP_LPJ_T0051871.1 MGP_LPJ_G0025134.1 mouse_genomes_project 19 45919865 45922131 + MGP_LPJ_P0051871 Fbxl15 protein_coding protein_coding MGP_LPJ_T0052124.1 MGP_LPJ_G0025219.1 mouse_genomes_project 19 60298337 60340186 - MGP_LPJ_P0052124 Rab11fip2 protein_coding protein_coding MGP_LPJ_T0052125.1 MGP_LPJ_G0025219.1 mouse_genomes_project 19 60299147 60339897 - MGP_LPJ_P0052125 Rab11fip2 protein_coding protein_coding MGP_LPJ_T0052126.1 MGP_LPJ_G0025219.1 mouse_genomes_project 19 60302367 60339533 - MGP_LPJ_P0052126 Rab11fip2 protein_coding protein_coding MGP_LPJ_T0098020.1 MGP_LPJ_G0036301.1 mouse_genomes_project 19 60627908 60629255 + pseudogene pseudogene MGP_LPJ_T0050902.1 MGP_LPJ_G0024758.1 mouse_genomes_project 19 7330501 7348609 + MGP_LPJ_P0050902 Fads3 protein_coding protein_coding MGP_LPJ_T0052134.1 MGP_LPJ_G0025225.1 mouse_genomes_project 19 61251309 61269846 + MGP_LPJ_P0052134 Fam45a protein_coding protein_coding MGP_LPJ_T0052135.1 MGP_LPJ_G0025225.1 mouse_genomes_project 19 61251315 61275677 + MGP_LPJ_P0052135 Fam45a protein_coding protein_coding MGP_LPJ_T0052136.1 MGP_LPJ_G0025225.1 mouse_genomes_project 19 61251320 61258088 + Fam45a protein_coding retained_intron MGP_LPJ_T0052137.1 MGP_LPJ_G0025225.1 mouse_genomes_project 19 61251335 61275677 + MGP_LPJ_P0052137 Fam45a protein_coding protein_coding MGP_LPJ_T0052138.1 MGP_LPJ_G0025225.1 mouse_genomes_project 19 61251335 61262081 + MGP_LPJ_P0052138 Fam45a protein_coding nonsense_mediated_decay MGP_LPJ_T0052139.1 MGP_LPJ_G0025225.1 mouse_genomes_project 19 61251851 61254414 + Fam45a protein_coding processed_transcript MGP_LPJ_T0052140.1 MGP_LPJ_G0025225.1 mouse_genomes_project 19 61269531 61274564 + Fam45a protein_coding retained_intron MGP_LPJ_T0051847.1 MGP_LPJ_G0025130.1 mouse_genomes_project 19 45718937 45731578 - MGP_LPJ_P0051847 Pitx3 protein_coding protein_coding MGP_LPJ_T0051848.1 MGP_LPJ_G0025130.1 mouse_genomes_project 19 45719747 45720542 - Pitx3 protein_coding retained_intron MGP_LPJ_T0051849.1 MGP_LPJ_G0025130.1 mouse_genomes_project 19 45720284 45724250 - MGP_LPJ_P0051849 Pitx3 protein_coding protein_coding MGP_LPJ_T0050190.1 MGP_LPJ_G0024558.1 mouse_genomes_project 19 819554 821078 + MGP_LPJ_P0050190 Nudt8 protein_coding protein_coding MGP_LPJ_T0050191.1 MGP_LPJ_G0024558.1 mouse_genomes_project 19 819600 824755 + MGP_LPJ_P0050191 Nudt8 protein_coding nonsense_mediated_decay MGP_LPJ_T0050192.1 MGP_LPJ_G0024558.1 mouse_genomes_project 19 819605 821076 + MGP_LPJ_P0050192 Nudt8 protein_coding protein_coding MGP_LPJ_T0100541.1 MGP_LPJ_G0038804.1 mouse_genomes_project 19 17138849 17138981 + Gm25437 snoRNA snoRNA MGP_LPJ_T0003884.1 MGP_LPJ_G0003477.1 mouse_genomes_project 19 44291875 44299283 - 1700039E22Rik antisense antisense MGP_LPJ_T0051913.1 MGP_LPJ_G0025156.1 mouse_genomes_project 19 46846938 46847604 - MGP_LPJ_P0051913 Gm6970 protein_coding protein_coding MGP_LPJ_T0051225.1 MGP_LPJ_G0024915.1 mouse_genomes_project 19 21806196 21841141 + MGP_LPJ_P0051225 Ptar1 protein_coding protein_coding MGP_LPJ_T0051938.1 MGP_LPJ_G0025163.1 mouse_genomes_project 19 47452856 47565623 - MGP_LPJ_P0051938 Cfap43 protein_coding protein_coding MGP_LPJ_T0051939.1 MGP_LPJ_G0025163.1 mouse_genomes_project 19 47452901 47479045 - Cfap43 protein_coding processed_transcript MGP_LPJ_T0051940.1 MGP_LPJ_G0025163.1 mouse_genomes_project 19 47452901 47479045 - Cfap43 protein_coding processed_transcript MGP_LPJ_T0051941.1 MGP_LPJ_G0025163.1 mouse_genomes_project 19 47469838 47479053 - Cfap43 protein_coding processed_transcript MGP_LPJ_T0051942.1 MGP_LPJ_G0025163.1 mouse_genomes_project 19 47505550 47665720 - Cfap43 protein_coding retained_intron MGP_LPJ_T0051943.1 MGP_LPJ_G0025163.1 mouse_genomes_project 19 47515301 47535921 - Cfap43 protein_coding processed_transcript MGP_LPJ_T0051944.1 MGP_LPJ_G0025163.1 mouse_genomes_project 19 47550272 47565602 - Cfap43 protein_coding retained_intron MGP_LPJ_T0051951.1 MGP_LPJ_G0025163.1 mouse_genomes_project 19 47641561 47665732 - MGP_LPJ_P0051951 Cfap43 protein_coding protein_coding MGP_LPJ_T0051241.1 MGP_LPJ_G0024925.1 mouse_genomes_project 19 23103280 23105625 - MGP_LPJ_P0051241 Foxd4 protein_coding protein_coding MGP_LPJ_T0050710.1 MGP_LPJ_G0024699.1 mouse_genomes_project 19 3950991 3956036 - MGP_LPJ_P0050710 Nudt22 protein_coding protein_coding MGP_LPJ_T0050711.1 MGP_LPJ_G0024699.1 mouse_genomes_project 19 3950991 3955956 - MGP_LPJ_P0050711 Nudt22 protein_coding protein_coding MGP_LPJ_T0050712.1 MGP_LPJ_G0024699.1 mouse_genomes_project 19 3950992 3952849 - Nudt22 protein_coding retained_intron MGP_LPJ_T0050996.1 MGP_LPJ_G0024795.1 mouse_genomes_project 19 8585546 8603886 - MGP_LPJ_P0050996 Ms4a1 protein_coding protein_coding MGP_LPJ_T0050997.1 MGP_LPJ_G0024795.1 mouse_genomes_project 19 8586748 8590556 - Ms4a1 protein_coding retained_intron MGP_LPJ_T0050998.1 MGP_LPJ_G0024795.1 mouse_genomes_project 19 8589861 8603790 - Ms4a1 protein_coding retained_intron MGP_LPJ_T0003858.1 MGP_LPJ_G0003460.1 mouse_genomes_project 19 2688077 2692499 + Gm16538 antisense antisense MGP_LPJ_T0011492.1 MGP_LPJ_G0009610.1 mouse_genomes_project 19 16635142 16635358 - Gm24190 misc_RNA misc_RNA MGP_LPJ_T0007117.1 MGP_LPJ_G0005844.1 mouse_genomes_project 19 45926984 45930239 + Gm26792 lincRNA lincRNA MGP_LPJ_T0007106.1 MGP_LPJ_G0005836.1 mouse_genomes_project 19 40134717 40140298 + E030044B06Rik lincRNA lincRNA MGP_LPJ_T0003885.1 MGP_LPJ_G0003478.1 mouse_genomes_project 19 44648420 44653536 - Tlx1os antisense antisense MGP_LPJ_T0051043.1 MGP_LPJ_G0024808.1 mouse_genomes_project 19 9019834 9031144 - MGP_LPJ_P0051043 Ms4a3 protein_coding protein_coding MGP_LPJ_T0051044.1 MGP_LPJ_G0024808.1 mouse_genomes_project 19 9019837 9031173 - MGP_LPJ_P0051044 Ms4a3 protein_coding protein_coding MGP_LPJ_T0051045.1 MGP_LPJ_G0024808.1 mouse_genomes_project 19 9022240 9031190 - Ms4a3 protein_coding retained_intron MGP_LPJ_T0050891.1 MGP_LPJ_G0024752.1 mouse_genomes_project 19 6309192 6336080 - MGP_LPJ_P0050891 Asrgl1 protein_coding protein_coding MGP_LPJ_T0050892.1 MGP_LPJ_G0024752.1 mouse_genomes_project 19 6331810 6335975 - Asrgl1 protein_coding processed_transcript MGP_LPJ_T0050956.1 MGP_LPJ_G0024782.1 mouse_genomes_project 19 8196549 8210746 - MGP_LPJ_P0050956 Tmem109 protein_coding protein_coding MGP_LPJ_T0050957.1 MGP_LPJ_G0024782.1 mouse_genomes_project 19 8199121 8207642 - MGP_LPJ_P0050957 Tmem109 protein_coding protein_coding MGP_LPJ_T0050958.1 MGP_LPJ_G0024782.1 mouse_genomes_project 19 8199405 8202009 - Tmem109 protein_coding retained_intron MGP_LPJ_T0050959.1 MGP_LPJ_G0024782.1 mouse_genomes_project 19 8199460 8210746 - MGP_LPJ_P0050959 Tmem109 protein_coding protein_coding MGP_LPJ_T0050960.1 MGP_LPJ_G0024782.1 mouse_genomes_project 19 8201199 8210456 - Tmem109 protein_coding retained_intron MGP_LPJ_T0050961.1 MGP_LPJ_G0024782.1 mouse_genomes_project 19 8201513 8210476 - MGP_LPJ_P0050961 Tmem109 protein_coding protein_coding MGP_LPJ_T0050962.1 MGP_LPJ_G0024782.1 mouse_genomes_project 19 8201531 8210443 - MGP_LPJ_P0050962 Tmem109 protein_coding protein_coding MGP_LPJ_T0050963.1 MGP_LPJ_G0024782.1 mouse_genomes_project 19 8207773 8210443 - Tmem109 protein_coding processed_transcript MGP_LPJ_T0051867.1 MGP_LPJ_G0025133.1 mouse_genomes_project 19 45903755 45909527 - MGP_LPJ_P0051867 Psd protein_coding unknown_likely_coding MGP_LPJ_T0051868.1 MGP_LPJ_G0025133.1 mouse_genomes_project 19 45903762 45918835 - MGP_LPJ_P0051868 Psd protein_coding protein_coding MGP_LPJ_T0051869.1 MGP_LPJ_G0025133.1 mouse_genomes_project 19 45903762 45918835 - MGP_LPJ_P0051869 Psd protein_coding protein_coding MGP_LPJ_T0052051.1 MGP_LPJ_G0025197.1 mouse_genomes_project 19 57019708 57056593 - MGP_LPJ_P0052051 Ccdc186 protein_coding protein_coding MGP_LPJ_T0052052.1 MGP_LPJ_G0025197.1 mouse_genomes_project 19 57022758 57028728 - MGP_LPJ_P0052052 Ccdc186 protein_coding protein_coding MGP_LPJ_T0052053.1 MGP_LPJ_G0025197.1 mouse_genomes_project 19 57023190 57048086 - MGP_LPJ_P0052053 Ccdc186 protein_coding protein_coding MGP_LPJ_T0052054.1 MGP_LPJ_G0025197.1 mouse_genomes_project 19 57025189 57031821 - Ccdc186 protein_coding retained_intron MGP_LPJ_T0052055.1 MGP_LPJ_G0025197.1 mouse_genomes_project 19 57031661 57035299 - Ccdc186 protein_coding retained_intron MGP_LPJ_T0052056.1 MGP_LPJ_G0025197.1 mouse_genomes_project 19 57034351 57056593 - Ccdc186 protein_coding retained_intron MGP_LPJ_T0050972.1 MGP_LPJ_G0024784.1 mouse_genomes_project 19 8246972 8248983 - MGP_LPJ_P0050972 Zp1 protein_coding protein_coding MGP_LPJ_T0050973.1 MGP_LPJ_G0024784.1 mouse_genomes_project 19 8246974 8253317 - MGP_LPJ_P0050973 Zp1 protein_coding protein_coding MGP_LPJ_T0051611.1 MGP_LPJ_G0025052.1 mouse_genomes_project 19 40753946 40837630 + MGP_LPJ_P0051611 Lcor protein_coding protein_coding MGP_LPJ_T0051612.1 MGP_LPJ_G0025052.1 mouse_genomes_project 19 40825027 40835165 + MGP_LPJ_P0051612 Lcor protein_coding protein_coding MGP_LPJ_T0001046.1 MGP_LPJ_G0000971.1 mouse_genomes_project 19 1661543 1664612 - TEC TEC MGP_LPJ_T0010313.1 MGP_LPJ_G0008431.1 mouse_genomes_project 19 9330321 9330394 + Mir6994 miRNA miRNA MGP_LPJ_T0051312.1 MGP_LPJ_G0024941.1 mouse_genomes_project 19 27393370 27396228 + MGP_LPJ_P0051312 Plpp6 protein_coding protein_coding MGP_LPJ_T0050316.1 MGP_LPJ_G0024591.1 mouse_genomes_project 19 1654169 1662317 + Rbm4b protein_coding retained_intron MGP_LPJ_T0050317.1 MGP_LPJ_G0024591.1 mouse_genomes_project 19 1654190 1660142 + Rbm4b protein_coding processed_transcript MGP_LPJ_T0050318.1 MGP_LPJ_G0024591.1 mouse_genomes_project 19 1654191 1660783 + Rbm4b protein_coding retained_intron MGP_LPJ_T0050319.1 MGP_LPJ_G0024591.1 mouse_genomes_project 19 1654197 1665381 + MGP_LPJ_P0050319 Rbm4b protein_coding protein_coding MGP_LPJ_T0050320.1 MGP_LPJ_G0024591.1 mouse_genomes_project 19 1660836 1666506 + Rbm4b protein_coding retained_intron MGP_LPJ_T0050321.1 MGP_LPJ_G0024591.1 mouse_genomes_project 19 1663905 1665084 + Rbm4b protein_coding processed_transcript MGP_LPJ_T0010319.1 MGP_LPJ_G0008437.1 mouse_genomes_project 19 27575585 27575682 + Mir101b miRNA miRNA MGP_LPJ_T0050178.1 MGP_LPJ_G0024552.1 mouse_genomes_project 19 714791 731062 - MGP_LPJ_P0050178 Aldh3b1 protein_coding protein_coding MGP_LPJ_T0050903.1 MGP_LPJ_G0024759.1 mouse_genomes_project 19 7353101 7390289 - MGP_LPJ_P0050903 Fads2 protein_coding protein_coding MGP_LPJ_T0051443.1 MGP_LPJ_G0024995.1 mouse_genomes_project 19 33818404 33874976 + MGP_LPJ_P0051443 Kif20b protein_coding protein_coding MGP_LPJ_T0051444.1 MGP_LPJ_G0024995.1 mouse_genomes_project 19 33818587 33874815 + MGP_LPJ_P0051444 Kif20b protein_coding unknown_likely_coding MGP_LPJ_T0051251.1 MGP_LPJ_G0024930.1 mouse_genomes_project 19 23871869 23885170 + MGP_LPJ_P0051251 Dmrt3 protein_coding protein_coding MGP_LPJ_T0050882.1 MGP_LPJ_G0024749.1 mouse_genomes_project 19 6154425 6165395 + MGP_LPJ_P0050882 Eef1g protein_coding protein_coding MGP_LPJ_T0050883.1 MGP_LPJ_G0024749.1 mouse_genomes_project 19 6154781 6159725 + Eef1g protein_coding processed_transcript MGP_LPJ_T0050884.1 MGP_LPJ_G0024749.1 mouse_genomes_project 19 6155427 6159845 + Eef1g protein_coding processed_transcript MGP_LPJ_T0050885.1 MGP_LPJ_G0024749.1 mouse_genomes_project 19 6155427 6157413 + Eef1g protein_coding retained_intron MGP_LPJ_T0050886.1 MGP_LPJ_G0024749.1 mouse_genomes_project 19 6155427 6156718 + Eef1g protein_coding retained_intron MGP_LPJ_T0050887.1 MGP_LPJ_G0024749.1 mouse_genomes_project 19 6159612 6165687 + Eef1g protein_coding retained_intron MGP_LPJ_T0011485.1 MGP_LPJ_G0009603.1 mouse_genomes_project 19 2762563 2762649 - Gm27694 misc_RNA misc_RNA MGP_LPJ_T0051811.1 MGP_LPJ_G0025122.1 mouse_genomes_project 19 45286695 45319540 - MGP_LPJ_P0051811 Mgea5 protein_coding protein_coding MGP_LPJ_T0052116.1 MGP_LPJ_G0025214.1 mouse_genomes_project 19 59557114 59560984 - MGP_LPJ_P0052116 Vax1 protein_coding protein_coding MGP_LPJ_T0052117.1 MGP_LPJ_G0025214.1 mouse_genomes_project 19 59557525 59557908 - Vax1 protein_coding processed_transcript MGP_LPJ_T0099288.1 MGP_LPJ_G0037551.1 mouse_genomes_project 19 10880317 10880424 - Gm22443 snRNA snRNA MGP_LPJ_T0051372.1 MGP_LPJ_G0024962.1 mouse_genomes_project 19 29128612 30378682 - MGP_LPJ_P0051372 Prkg1 protein_coding protein_coding MGP_LPJ_T0051373.1 MGP_LPJ_G0024962.1 mouse_genomes_project 19 29129605 30283861 - MGP_LPJ_P0051373 Prkg1 protein_coding protein_coding MGP_LPJ_T0051374.1 MGP_LPJ_G0024962.1 mouse_genomes_project 19 29130019 29135097 - Prkg1 protein_coding processed_transcript MGP_LPJ_T0051375.1 MGP_LPJ_G0024962.1 mouse_genomes_project 19 29130021 29135097 - Prkg1 protein_coding processed_transcript MGP_LPJ_T0051376.1 MGP_LPJ_G0024962.1 mouse_genomes_project 19 29183835 29189962 - Prkg1 protein_coding processed_transcript MGP_LPJ_T0051377.1 MGP_LPJ_G0024962.1 mouse_genomes_project 19 29267668 29338873 - Prkg1 protein_coding retained_intron MGP_LPJ_T0051379.1 MGP_LPJ_G0024962.1 mouse_genomes_project 19 30355741 30378622 - MGP_LPJ_P0051379 Prkg1 protein_coding protein_coding MGP_LPJ_T0010346.1 MGP_LPJ_G0008464.1 mouse_genomes_project 19 61214137 61214206 - Mir3084-2 miRNA miRNA MGP_LPJ_T0099306.1 MGP_LPJ_G0037569.1 mouse_genomes_project 19 51114546 51114653 - Gm25644 snRNA snRNA MGP_LPJ_T0050305.1 MGP_LPJ_G0024585.1 mouse_genomes_project 19 1401328 1506599 + MGP_LPJ_P0050305 Pcx protein_coding unknown_likely_coding MGP_LPJ_T0050306.1 MGP_LPJ_G0024585.1 mouse_genomes_project 19 1401438 1517586 + MGP_LPJ_P0050306 Pcx protein_coding protein_coding MGP_LPJ_T0050307.1 MGP_LPJ_G0024585.1 mouse_genomes_project 19 1488976 1517586 + MGP_LPJ_P0050307 Pcx protein_coding protein_coding MGP_LPJ_T0051986.1 MGP_LPJ_G0025179.1 mouse_genomes_project 19 53959204 53997553 + MGP_LPJ_P0051986 Pdcd4 protein_coding protein_coding MGP_LPJ_T0051987.1 MGP_LPJ_G0025179.1 mouse_genomes_project 19 53970337 53997553 + MGP_LPJ_P0051987 Pdcd4 protein_coding protein_coding MGP_LPJ_T0051988.1 MGP_LPJ_G0025179.1 mouse_genomes_project 19 53970337 53997553 + MGP_LPJ_P0051988 Pdcd4 protein_coding protein_coding MGP_LPJ_T0051751.1 MGP_LPJ_G0025099.1 mouse_genomes_project 19 43818251 43832410 - MGP_LPJ_P0051751 Scd1 protein_coding protein_coding MGP_LPJ_T0050928.1 MGP_LPJ_G0024768.1 mouse_genomes_project 19 7809986 7834902 - MGP_LPJ_P0050928 Sdhaf2 protein_coding protein_coding MGP_LPJ_T0050896.1 MGP_LPJ_G0024756.1 mouse_genomes_project 19 7270788 7286890 - MGP_LPJ_P0050896 Best1 protein_coding protein_coding MGP_LPJ_T0050897.1 MGP_LPJ_G0024756.1 mouse_genomes_project 19 7276162 7278530 - Best1 protein_coding processed_transcript MGP_LPJ_T0051154.1 MGP_LPJ_G0024887.1 mouse_genomes_project 19 14171082 14358226 + MGP_LPJ_P0051154 Gna14 protein_coding protein_coding MGP_LPJ_T0051151.1 MGP_LPJ_G0024886.1 mouse_genomes_project 19 13850235 14117642 + MGP_LPJ_P0051151 Gnaq protein_coding protein_coding MGP_LPJ_T0051152.1 MGP_LPJ_G0024886.1 mouse_genomes_project 19 13850700 14047452 + Gnaq protein_coding retained_intron MGP_LPJ_T0051153.1 MGP_LPJ_G0024886.1 mouse_genomes_project 19 13942599 14048199 + Gnaq protein_coding processed_transcript MGP_LPJ_T0098514.1 MGP_LPJ_G0036789.1 mouse_genomes_project 19 32355489 32367613 - sense_intronic sense_intronic MGP_LPJ_T0050236.1 MGP_LPJ_G0024568.1 mouse_genomes_project 19 970147 976087 + MGP_LPJ_P0050236 Gpr152 protein_coding protein_coding MGP_LPJ_T0051658.1 MGP_LPJ_G0025069.1 mouse_genomes_project 19 41428778 41434565 - MGP_LPJ_P0051658 Avpi1 protein_coding protein_coding MGP_LPJ_T0051659.1 MGP_LPJ_G0025069.1 mouse_genomes_project 19 41430284 41434495 - MGP_LPJ_P0051659 Avpi1 protein_coding protein_coding MGP_LPJ_T0050544.1 MGP_LPJ_G0024667.1 mouse_genomes_project 19 3113062 3122996 + MGP_LPJ_P0050544 Naaladl1 protein_coding protein_coding MGP_LPJ_T0017661.1 MGP_LPJ_G0015304.1 mouse_genomes_project 19 35584649 35690599 - 1500017E21Rik processed_transcript processed_transcript MGP_LPJ_T0017662.1 MGP_LPJ_G0015304.1 mouse_genomes_project 19 35591809 35662029 - 1500017E21Rik processed_transcript processed_transcript MGP_LPJ_T0017663.1 MGP_LPJ_G0015304.1 mouse_genomes_project 19 35591821 35598356 - 1500017E21Rik processed_transcript processed_transcript MGP_LPJ_T0017664.1 MGP_LPJ_G0015304.1 mouse_genomes_project 19 35591826 35598336 - 1500017E21Rik processed_transcript processed_transcript MGP_LPJ_T0017665.1 MGP_LPJ_G0015304.1 mouse_genomes_project 19 35615852 35629796 - 1500017E21Rik processed_transcript processed_transcript MGP_LPJ_T0017666.1 MGP_LPJ_G0015304.1 mouse_genomes_project 19 35617989 35661823 - 1500017E21Rik processed_transcript processed_transcript MGP_LPJ_T0017667.1 MGP_LPJ_G0015304.1 mouse_genomes_project 19 35629639 35661882 - 1500017E21Rik processed_transcript processed_transcript MGP_LPJ_T0017668.1 MGP_LPJ_G0015304.1 mouse_genomes_project 19 35629808 35661878 - 1500017E21Rik processed_transcript processed_transcript MGP_LPJ_T0051989.1 MGP_LPJ_G0025180.1 mouse_genomes_project 19 53997368 54013835 - MGP_LPJ_P0051989 Bbip1 protein_coding protein_coding MGP_LPJ_T0052105.1 MGP_LPJ_G0025207.1 mouse_genomes_project 19 59014075 59026602 + MGP_LPJ_P0052105 Pnlip protein_coding protein_coding MGP_LPJ_T0050725.1 MGP_LPJ_G0024708.1 mouse_genomes_project 19 4241191 4244011 + MGP_LPJ_P0050725 Rcor2 protein_coding protein_coding MGP_LPJ_T0050726.1 MGP_LPJ_G0024708.1 mouse_genomes_project 19 4242828 4248524 + MGP_LPJ_P0050726 Rcor2 protein_coding protein_coding MGP_LPJ_T0050727.1 MGP_LPJ_G0024708.1 mouse_genomes_project 19 4244818 4245636 + Rcor2 protein_coding retained_intron MGP_LPJ_T0050913.1 MGP_LPJ_G0024763.1 mouse_genomes_project 19 7508185 7540662 - MGP_LPJ_P0050913 Myrf protein_coding protein_coding MGP_LPJ_T0050914.1 MGP_LPJ_G0024763.1 mouse_genomes_project 19 7509218 7540662 - Myrf protein_coding retained_intron MGP_LPJ_T0050915.1 MGP_LPJ_G0024763.1 mouse_genomes_project 19 7509617 7540659 - MGP_LPJ_P0050915 Myrf protein_coding protein_coding MGP_LPJ_T0050916.1 MGP_LPJ_G0024763.1 mouse_genomes_project 19 7510213 7517450 - MGP_LPJ_P0050916 Myrf protein_coding protein_coding MGP_LPJ_T0050917.1 MGP_LPJ_G0024763.1 mouse_genomes_project 19 7510298 7540518 - MGP_LPJ_P0050917 Myrf protein_coding protein_coding MGP_LPJ_T0050918.1 MGP_LPJ_G0024763.1 mouse_genomes_project 19 7525937 7540662 - Myrf protein_coding retained_intron MGP_LPJ_T0010323.1 MGP_LPJ_G0008441.1 mouse_genomes_project 19 33637246 33637350 + Gm27476 miRNA miRNA MGP_LPJ_T0051283.1 MGP_LPJ_G0024936.1 mouse_genomes_project 19 25737572 25778335 - MGP_LPJ_P0051283 Pum3 protein_coding protein_coding MGP_LPJ_T0050435.1 MGP_LPJ_G0024637.1 mouse_genomes_project 19 2557306 2564384 - MGP_LPJ_P0050435 Kat5 protein_coding protein_coding MGP_LPJ_T0051426.1 MGP_LPJ_G0024984.1 mouse_genomes_project 19 33114031 33151209 + MGP_LPJ_P0051426 Fas protein_coding protein_coding MGP_LPJ_T0051427.1 MGP_LPJ_G0024984.1 mouse_genomes_project 19 33114031 33132671 + MGP_LPJ_P0051427 Fas protein_coding protein_coding MGP_LPJ_T0099293.1 MGP_LPJ_G0037556.1 mouse_genomes_project 19 21388956 21389063 + Gm24263 snRNA snRNA MGP_LPJ_T0051194.1 MGP_LPJ_G0024903.1 mouse_genomes_project 19 18752706 18932360 - MGP_LPJ_P0051194 Tmc1 protein_coding protein_coding MGP_LPJ_T0010296.1 MGP_LPJ_G0008414.1 mouse_genomes_project 19 1119218 1119279 - Mir6985 miRNA miRNA MGP_LPJ_T0051284.1 MGP_LPJ_G0024937.1 mouse_genomes_project 19 26139381 26210126 - Rfx3 protein_coding processed_transcript MGP_LPJ_T0051285.1 MGP_LPJ_G0024937.1 mouse_genomes_project 19 26139696 26308010 - MGP_LPJ_P0051285 Rfx3 protein_coding protein_coding MGP_LPJ_T0051286.1 MGP_LPJ_G0024937.1 mouse_genomes_project 19 26139696 26281141 - MGP_LPJ_P0051286 Rfx3 protein_coding nonsense_mediated_decay MGP_LPJ_T0051287.1 MGP_LPJ_G0024937.1 mouse_genomes_project 19 26178420 26391553 - Rfx3 protein_coding retained_intron MGP_LPJ_T0051288.1 MGP_LPJ_G0024937.1 mouse_genomes_project 19 26246067 26391188 - MGP_LPJ_P0051288 Rfx3 protein_coding protein_coding MGP_LPJ_T0050397.1 MGP_LPJ_G0024626.1 mouse_genomes_project 19 2405490 2406099 - MGP_LPJ_P0050397 Ccdc85b protein_coding protein_coding MGP_LPJ_T0100556.1 MGP_LPJ_G0038819.1 mouse_genomes_project 19 61214138 61214270 - Snora19 snoRNA snoRNA MGP_LPJ_T0050367.1 MGP_LPJ_G0024612.1 mouse_genomes_project 19 2022613 2030403 - MGP_LPJ_P0050367 Rab1b protein_coding protein_coding MGP_LPJ_T0051237.1 MGP_LPJ_G0024924.1 mouse_genomes_project 19 22883868 23064338 - MGP_LPJ_P0051237 Pgm5 protein_coding protein_coding MGP_LPJ_T0051238.1 MGP_LPJ_G0024924.1 mouse_genomes_project 19 22885403 22964968 - Pgm5 protein_coding processed_transcript MGP_LPJ_T0051239.1 MGP_LPJ_G0024924.1 mouse_genomes_project 19 23018130 23064170 - Pgm5 protein_coding retained_intron MGP_LPJ_T0051240.1 MGP_LPJ_G0024924.1 mouse_genomes_project 19 23018231 23064135 - Pgm5 protein_coding retained_intron MGP_LPJ_T0051627.1 MGP_LPJ_G0025060.1 mouse_genomes_project 19 41220536 41230686 - MGP_LPJ_P0051627 Exosc1 protein_coding protein_coding MGP_LPJ_T0051628.1 MGP_LPJ_G0025060.1 mouse_genomes_project 19 41220536 41230686 - MGP_LPJ_P0051628 Exosc1 protein_coding protein_coding MGP_LPJ_T0050112.1 MGP_LPJ_G0024540.1 mouse_genomes_project 19 14722 35992 - MGP_LPJ_P0050112 Ighmbp2 protein_coding protein_coding MGP_LPJ_T0050113.1 MGP_LPJ_G0024540.1 mouse_genomes_project 19 18108 36186 - MGP_LPJ_P0050113 Ighmbp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0050114.1 MGP_LPJ_G0024540.1 mouse_genomes_project 19 18654 21006 - Ighmbp2 protein_coding retained_intron MGP_LPJ_T0051558.1 MGP_LPJ_G0025038.1 mouse_genomes_project 19 39361945 39411546 - MGP_LPJ_P0051558 Cyp2c70 protein_coding protein_coding MGP_LPJ_T0051559.1 MGP_LPJ_G0025038.1 mouse_genomes_project 19 39372936 39411546 - MGP_LPJ_P0051559 Cyp2c70 protein_coding nonsense_mediated_decay MGP_LPJ_T0051560.1 MGP_LPJ_G0025038.1 mouse_genomes_project 19 39374011 39411546 - MGP_LPJ_P0051560 Cyp2c70 protein_coding nonsense_mediated_decay MGP_LPJ_T0051561.1 MGP_LPJ_G0025038.1 mouse_genomes_project 19 39398537 39411593 - Cyp2c70 protein_coding retained_intron MGP_LPJ_T0052133.1 MGP_LPJ_G0025224.1 mouse_genomes_project 19 61199639 61230507 - MGP_LPJ_P0052133 Eif3a protein_coding protein_coding MGP_LPJ_T0010298.1 MGP_LPJ_G0008416.1 mouse_genomes_project 19 2130029 2130135 - Gm27468 miRNA miRNA MGP_LPJ_T0050208.1 MGP_LPJ_G0024562.1 mouse_genomes_project 19 880748 882718 - MGP_LPJ_P0050208 BC021614 protein_coding protein_coding MGP_LPJ_T0050209.1 MGP_LPJ_G0024562.1 mouse_genomes_project 19 880749 882567 - MGP_LPJ_P0050209 BC021614 protein_coding protein_coding MGP_LPJ_T0051061.1 MGP_LPJ_G0024818.1 mouse_genomes_project 19 9302731 9303783 + MGP_LPJ_P0051061 Olfr1420 protein_coding protein_coding MGP_LPJ_T0051331.1 MGP_LPJ_G0024949.1 mouse_genomes_project 19 27824696 27846606 + MGP_LPJ_P0051331 Cd274 protein_coding protein_coding MGP_LPJ_T0050193.1 MGP_LPJ_G0024559.1 mouse_genomes_project 19 822283 825931 + Doc2g protein_coding retained_intron MGP_LPJ_T0050194.1 MGP_LPJ_G0024559.1 mouse_genomes_project 19 822287 824751 + Doc2g protein_coding retained_intron MGP_LPJ_T0050195.1 MGP_LPJ_G0024559.1 mouse_genomes_project 19 822298 825932 + MGP_LPJ_P0050195 Doc2g protein_coding protein_coding MGP_LPJ_T0050196.1 MGP_LPJ_G0024559.1 mouse_genomes_project 19 822662 825060 + Doc2g protein_coding retained_intron MGP_LPJ_T0050258.1 MGP_LPJ_G0024573.1 mouse_genomes_project 19 1018313 1025003 - MGP_LPJ_P0050258 Tbc1d10c protein_coding protein_coding MGP_LPJ_T0003879.1 MGP_LPJ_G0003474.1 mouse_genomes_project 19 37915872 37919746 - Gm28991 antisense antisense MGP_LPJ_T0007098.1 MGP_LPJ_G0005830.1 mouse_genomes_project 19 33303219 33305030 + Gm26902 lincRNA lincRNA MGP_LPJ_T0007099.1 MGP_LPJ_G0005830.1 mouse_genomes_project 19 33303244 33309898 + Gm26902 lincRNA lincRNA MGP_LPJ_T0051756.1 MGP_LPJ_G0025103.1 mouse_genomes_project 19 43985437 43992292 - MGP_LPJ_P0051756 Ndufb8 protein_coding protein_coding MGP_LPJ_T0051757.1 MGP_LPJ_G0025103.1 mouse_genomes_project 19 43987105 43992306 - MGP_LPJ_P0051757 Ndufb8 protein_coding protein_coding MGP_LPJ_T0051758.1 MGP_LPJ_G0025103.1 mouse_genomes_project 19 43987118 43992285 - MGP_LPJ_P0051758 Ndufb8 protein_coding nonsense_mediated_decay MGP_LPJ_T0051759.1 MGP_LPJ_G0025103.1 mouse_genomes_project 19 43987120 43989746 - Ndufb8 protein_coding retained_intron MGP_LPJ_T0051760.1 MGP_LPJ_G0025103.1 mouse_genomes_project 19 43989487 43991852 - MGP_LPJ_P0051760 Ndufb8 protein_coding protein_coding MGP_LPJ_T0051761.1 MGP_LPJ_G0025103.1 mouse_genomes_project 19 43989705 43992270 - MGP_LPJ_P0051761 Ndufb8 protein_coding protein_coding MGP_LPJ_T0051762.1 MGP_LPJ_G0025103.1 mouse_genomes_project 19 43990140 43992271 - Ndufb8 protein_coding retained_intron MGP_LPJ_T0051763.1 MGP_LPJ_G0025103.1 mouse_genomes_project 19 43991566 43992292 - Ndufb8 protein_coding retained_intron MGP_LPJ_T0051764.1 MGP_LPJ_G0025103.1 mouse_genomes_project 19 43991580 43992289 - Ndufb8 protein_coding retained_intron MGP_LPJ_T0051955.1 MGP_LPJ_G0025169.1 mouse_genomes_project 19 50000815 50548507 - MGP_LPJ_P0051955 protein_coding protein_coding MGP_LPJ_T0051956.1 MGP_LPJ_G0025169.1 mouse_genomes_project 19 50005174 50548507 - MGP_LPJ_P0051956 protein_coding protein_coding MGP_LPJ_T0051957.1 MGP_LPJ_G0025169.1 mouse_genomes_project 19 50008499 50115940 - MGP_LPJ_P0051957 protein_coding protein_coding MGP_LPJ_T0051958.1 MGP_LPJ_G0025169.1 mouse_genomes_project 19 50010194 50548346 - MGP_LPJ_P0051958 protein_coding protein_coding MGP_LPJ_T0102000.1 MGP_LPJ_G0040037.1 mouse_genomes_project 19 9641880 9709129 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0010297.1 MGP_LPJ_G0008415.1 mouse_genomes_project 19 1519731 1519789 - Mir6986 miRNA miRNA MGP_LPJ_T0051119.1 MGP_LPJ_G0024861.1 mouse_genomes_project 19 10923905 10924838 + MGP_LPJ_P0051119 Olfr1466 protein_coding protein_coding MGP_LPJ_T0051433.1 MGP_LPJ_G0024988.1 mouse_genomes_project 19 33442256 33476175 - MGP_LPJ_P0051433 Ifit1bl1 protein_coding protein_coding MGP_LPJ_T0051434.1 MGP_LPJ_G0024988.1 mouse_genomes_project 19 33442259 33477601 - MGP_LPJ_P0051434 Ifit1bl1 protein_coding protein_coding MGP_LPJ_T0051135.1 MGP_LPJ_G0024877.1 mouse_genomes_project 19 11435401 11436426 - MGP_LPJ_P0051135 Olfr1500 protein_coding protein_coding MGP_LPJ_T0051417.1 MGP_LPJ_G0024980.1 mouse_genomes_project 19 32928233 32948768 + MGP_LPJ_P0051417 Lipm protein_coding protein_coding MGP_LPJ_T0003877.1 MGP_LPJ_G0003473.1 mouse_genomes_project 19 37434937 37451869 - Gm42723 antisense antisense MGP_LPJ_T0003878.1 MGP_LPJ_G0003473.1 mouse_genomes_project 19 37450810 37451854 - Gm42723 antisense antisense MGP_LPJ_T0050929.1 MGP_LPJ_G0024769.1 mouse_genomes_project 19 7834936 7859424 + MGP_LPJ_P0050929 Cpsf7 protein_coding protein_coding MGP_LPJ_T0010303.1 MGP_LPJ_G0008421.1 mouse_genomes_project 19 3365249 3365314 + Mir6989 miRNA miRNA MGP_LPJ_T0007085.1 MGP_LPJ_G0005822.1 mouse_genomes_project 19 21085445 21131038 - C330002G04Rik lincRNA lincRNA MGP_LPJ_T0050975.1 MGP_LPJ_G0024786.1 mouse_genomes_project 19 8277547 8283399 - Ccdc86 protein_coding processed_transcript MGP_LPJ_T0050976.1 MGP_LPJ_G0024786.1 mouse_genomes_project 19 8277547 8285273 - MGP_LPJ_P0050976 Ccdc86 protein_coding protein_coding MGP_LPJ_T0050977.1 MGP_LPJ_G0024786.1 mouse_genomes_project 19 8281573 8285258 - Ccdc86 protein_coding retained_intron MGP_LPJ_T0051212.1 MGP_LPJ_G0024909.1 mouse_genomes_project 19 19805999 19888044 + MGP_LPJ_P0051212 Tmem2 protein_coding protein_coding MGP_LPJ_T0051213.1 MGP_LPJ_G0024909.1 mouse_genomes_project 19 19805999 19888043 + MGP_LPJ_P0051213 Tmem2 protein_coding protein_coding MGP_LPJ_T0050943.1 MGP_LPJ_G0024777.1 mouse_genomes_project 19 8021842 8033194 + MGP_LPJ_P0050943 Vps37c protein_coding unknown_likely_coding MGP_LPJ_T0007066.1 MGP_LPJ_G0005810.1 mouse_genomes_project 19 2057659 2058740 + Gm28901 lincRNA lincRNA MGP_LPJ_T0052128.1 MGP_LPJ_G0025221.1 mouse_genomes_project 19 60877857 60879423 - MGP_LPJ_P0052128 Prlhr protein_coding protein_coding MGP_LPJ_T0050930.1 MGP_LPJ_G0024770.1 mouse_genomes_project 19 7844341 7867425 - MGP_LPJ_P0050930 Tmem216 protein_coding protein_coding MGP_LPJ_T0050931.1 MGP_LPJ_G0024770.1 mouse_genomes_project 19 7849879 7867440 - MGP_LPJ_P0050931 Tmem216 protein_coding protein_coding MGP_LPJ_T0050932.1 MGP_LPJ_G0024770.1 mouse_genomes_project 19 7862149 7867927 - MGP_LPJ_P0050932 Tmem216 protein_coding protein_coding MGP_LPJ_T0050933.1 MGP_LPJ_G0024770.1 mouse_genomes_project 19 7862180 7867440 - MGP_LPJ_P0050933 Tmem216 protein_coding protein_coding MGP_LPJ_T0050934.1 MGP_LPJ_G0024770.1 mouse_genomes_project 19 7862238 7867440 - MGP_LPJ_P0050934 Tmem216 protein_coding protein_coding MGP_LPJ_T0050935.1 MGP_LPJ_G0024770.1 mouse_genomes_project 19 7866435 7867440 - Tmem216 protein_coding retained_intron MGP_LPJ_T0052027.1 MGP_LPJ_G0025190.1 mouse_genomes_project 19 56486964 56521332 + MGP_LPJ_P0052027 Habp2 protein_coding protein_coding MGP_LPJ_T0052028.1 MGP_LPJ_G0025190.1 mouse_genomes_project 19 56487744 56522059 + MGP_LPJ_P0052028 Habp2 protein_coding protein_coding MGP_LPJ_T0052029.1 MGP_LPJ_G0025190.1 mouse_genomes_project 19 56487758 56513063 + Habp2 protein_coding processed_transcript MGP_LPJ_T0052030.1 MGP_LPJ_G0025190.1 mouse_genomes_project 19 56487818 56517540 + MGP_LPJ_P0052030 Habp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0052031.1 MGP_LPJ_G0025190.1 mouse_genomes_project 19 56487818 56520879 + MGP_LPJ_P0052031 Habp2 protein_coding protein_coding MGP_LPJ_T0052032.1 MGP_LPJ_G0025190.1 mouse_genomes_project 19 56512888 56517662 + MGP_LPJ_P0052032 Habp2 protein_coding protein_coding MGP_LPJ_T0052033.1 MGP_LPJ_G0025190.1 mouse_genomes_project 19 56514020 56520873 + MGP_LPJ_P0052033 Habp2 protein_coding nonsense_mediated_decay MGP_LPJ_T0050355.1 MGP_LPJ_G0024605.1 mouse_genomes_project 19 1957165 1959478 + MGP_LPJ_P0050355 B4gat1 protein_coding protein_coding MGP_LPJ_T0051348.1 MGP_LPJ_G0024953.1 mouse_genomes_project 19 28163960 28174372 + MGP_LPJ_P0051348 Mlana protein_coding protein_coding MGP_LPJ_T0052092.1 MGP_LPJ_G0025203.1 mouse_genomes_project 19 57721924 57766264 + MGP_LPJ_P0052092 Trub1 protein_coding protein_coding MGP_LPJ_T0052093.1 MGP_LPJ_G0025203.1 mouse_genomes_project 19 57721924 57763361 + MGP_LPJ_P0052093 Trub1 protein_coding protein_coding MGP_LPJ_T0051486.1 MGP_LPJ_G0025006.1 mouse_genomes_project 19 36249499 36262997 + MGP_LPJ_P0051486 March5 protein_coding protein_coding MGP_LPJ_T0051487.1 MGP_LPJ_G0025006.1 mouse_genomes_project 19 36249507 36259562 + March5 protein_coding retained_intron MGP_LPJ_T0051488.1 MGP_LPJ_G0025006.1 mouse_genomes_project 19 36249801 36267282 + MGP_LPJ_P0051488 March5 protein_coding protein_coding MGP_LPJ_T0051414.1 MGP_LPJ_G0024979.1 mouse_genomes_project 19 32890612 32912183 + MGP_LPJ_P0051414 Lipn protein_coding protein_coding MGP_LPJ_T0051415.1 MGP_LPJ_G0024979.1 mouse_genomes_project 19 32890632 32897525 + MGP_LPJ_P0051415 Lipn protein_coding protein_coding MGP_LPJ_T0051416.1 MGP_LPJ_G0024979.1 mouse_genomes_project 19 32890783 32907823 + MGP_LPJ_P0051416 Lipn protein_coding nonsense_mediated_decay MGP_LPJ_T0007113.1 MGP_LPJ_G0005842.1 mouse_genomes_project 19 44839021 44847733 - Gm28578 lincRNA lincRNA MGP_LPJ_T0007114.1 MGP_LPJ_G0005842.1 mouse_genomes_project 19 44839041 44839787 - Gm28578 lincRNA lincRNA MGP_LPJ_T0007115.1 MGP_LPJ_G0005842.1 mouse_genomes_project 19 44844886 44847719 - Gm28578 lincRNA lincRNA MGP_LPJ_T0050396.1 MGP_LPJ_G0024625.1 mouse_genomes_project 19 2396376 2404647 + MGP_LPJ_P0050396 Fosl1 protein_coding protein_coding MGP_LPJ_T0050839.1 MGP_LPJ_G0024731.1 mouse_genomes_project 19 5960018 5966234 - MGP_LPJ_P0050839 Polr2g protein_coding protein_coding MGP_LPJ_T0051824.1 MGP_LPJ_G0025126.1 mouse_genomes_project 19 45599402 45613361 - MGP_LPJ_P0051824 Ldb1 protein_coding protein_coding MGP_LPJ_T0051825.1 MGP_LPJ_G0025126.1 mouse_genomes_project 19 45599403 45606431 - MGP_LPJ_P0051825 Ldb1 protein_coding protein_coding MGP_LPJ_T0051826.1 MGP_LPJ_G0025126.1 mouse_genomes_project 19 45599425 45613358 - MGP_LPJ_P0051826 Ldb1 protein_coding protein_coding MGP_LPJ_T0051827.1 MGP_LPJ_G0025126.1 mouse_genomes_project 19 45599498 45613357 - MGP_LPJ_P0051827 Ldb1 protein_coding protein_coding MGP_LPJ_T0051828.1 MGP_LPJ_G0025126.1 mouse_genomes_project 19 45599498 45613061 - MGP_LPJ_P0051828 Ldb1 protein_coding protein_coding MGP_LPJ_T0051829.1 MGP_LPJ_G0025126.1 mouse_genomes_project 19 45600554 45601688 - Ldb1 protein_coding retained_intron MGP_LPJ_T0051830.1 MGP_LPJ_G0025126.1 mouse_genomes_project 19 45600778 45613001 - MGP_LPJ_P0051830 Ldb1 protein_coding protein_coding MGP_LPJ_T0051831.1 MGP_LPJ_G0025126.1 mouse_genomes_project 19 45600860 45602810 - Ldb1 protein_coding retained_intron MGP_LPJ_T0051118.1 MGP_LPJ_G0024860.1 mouse_genomes_project 19 10892676 10893600 - MGP_LPJ_P0051118 Olfr1465 protein_coding protein_coding MGP_LPJ_T0050847.1 MGP_LPJ_G0024736.1 mouse_genomes_project 19 6008782 6019927 + MGP_LPJ_P0050847 Bscl2 protein_coding protein_coding MGP_LPJ_T0050848.1 MGP_LPJ_G0024736.1 mouse_genomes_project 19 6009002 6011563 + Bscl2 protein_coding processed_transcript MGP_LPJ_T0050849.1 MGP_LPJ_G0024736.1 mouse_genomes_project 19 6009044 6019911 + MGP_LPJ_P0050849 Bscl2 protein_coding protein_coding MGP_LPJ_T0050850.1 MGP_LPJ_G0024736.1 mouse_genomes_project 19 6010647 6019910 + MGP_LPJ_P0050850 Bscl2 protein_coding protein_coding MGP_LPJ_T0050851.1 MGP_LPJ_G0024736.1 mouse_genomes_project 19 6010692 6019911 + Bscl2 protein_coding retained_intron MGP_LPJ_T0050852.1 MGP_LPJ_G0024736.1 mouse_genomes_project 19 6010709 6019882 + MGP_LPJ_P0050852 Bscl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0050853.1 MGP_LPJ_G0024736.1 mouse_genomes_project 19 6011838 6019910 + MGP_LPJ_P0050853 Bscl2 protein_coding protein_coding MGP_LPJ_T0050854.1 MGP_LPJ_G0024736.1 mouse_genomes_project 19 6011854 6019910 + Bscl2 protein_coding retained_intron MGP_LPJ_T0050855.1 MGP_LPJ_G0024736.1 mouse_genomes_project 19 6011854 6019910 + Bscl2 protein_coding retained_intron MGP_LPJ_T0050856.1 MGP_LPJ_G0024736.1 mouse_genomes_project 19 6017509 6019867 + MGP_LPJ_P0050856 Bscl2 protein_coding nonsense_mediated_decay MGP_LPJ_T0017671.1 MGP_LPJ_G0015306.1 mouse_genomes_project 19 45852550 45855684 - Gm16726 processed_transcript processed_transcript MGP_LPJ_T0050310.1 MGP_LPJ_G0024587.1 mouse_genomes_project 19 1518384 1521451 - MGP_LPJ_P0050310 Rce1 protein_coding protein_coding MGP_LPJ_T0052145.1 MGP_LPJ_G0025227.1 mouse_genomes_project 19 61307445 61319862 - MGP_LPJ_P0052145 Prdx3 protein_coding protein_coding MGP_LPJ_T0050491.1 MGP_LPJ_G0024656.1 mouse_genomes_project 19 3054012 3061149 + MGP_LPJ_P0050491 Syvn1 protein_coding protein_coding MGP_LPJ_T0050492.1 MGP_LPJ_G0024656.1 mouse_genomes_project 19 3054074 3056640 + MGP_LPJ_P0050492 Syvn1 protein_coding protein_coding MGP_LPJ_T0050493.1 MGP_LPJ_G0024656.1 mouse_genomes_project 19 3054098 3061146 + MGP_LPJ_P0050493 Syvn1 protein_coding protein_coding MGP_LPJ_T0050494.1 MGP_LPJ_G0024656.1 mouse_genomes_project 19 3054501 3061148 + Syvn1 protein_coding retained_intron MGP_LPJ_T0050495.1 MGP_LPJ_G0024656.1 mouse_genomes_project 19 3054516 3061146 + MGP_LPJ_P0050495 Syvn1 protein_coding protein_coding MGP_LPJ_T0050496.1 MGP_LPJ_G0024656.1 mouse_genomes_project 19 3054521 3057088 + Syvn1 protein_coding retained_intron MGP_LPJ_T0050497.1 MGP_LPJ_G0024656.1 mouse_genomes_project 19 3054540 3061146 + MGP_LPJ_P0050497 Syvn1 protein_coding protein_coding MGP_LPJ_T0098218.1 MGP_LPJ_G0036499.1 mouse_genomes_project 19 3152484 3152604 + n-R5s19 rRNA rRNA MGP_LPJ_T0051993.1 MGP_LPJ_G0025183.1 mouse_genomes_project 19 55204799 55234443 - MGP_LPJ_P0051993 Gpam protein_coding protein_coding MGP_LPJ_T0051181.1 MGP_LPJ_G0024899.1 mouse_genomes_project 19 16791324 16862389 - MGP_LPJ_P0051181 Rorb protein_coding protein_coding MGP_LPJ_T0051182.1 MGP_LPJ_G0024899.1 mouse_genomes_project 19 16798548 16976091 - MGP_LPJ_P0051182 Rorb protein_coding protein_coding MGP_LPJ_T0051183.1 MGP_LPJ_G0024899.1 mouse_genomes_project 19 16836687 16862372 - Rorb protein_coding retained_intron MGP_LPJ_T0051184.1 MGP_LPJ_G0024899.1 mouse_genomes_project 19 16836704 16862383 - Rorb protein_coding retained_intron MGP_LPJ_T0051582.1 MGP_LPJ_G0025042.1 mouse_genomes_project 19 39850378 39867838 - MGP_LPJ_P0051582 Tctn3 protein_coding protein_coding MGP_LPJ_T0051583.1 MGP_LPJ_G0025042.1 mouse_genomes_project 19 39860694 39867808 - MGP_LPJ_P0051583 Tctn3 protein_coding protein_coding MGP_LPJ_T0051584.1 MGP_LPJ_G0025042.1 mouse_genomes_project 19 39862721 39867805 - MGP_LPJ_P0051584 Tctn3 protein_coding protein_coding MGP_LPJ_T0051585.1 MGP_LPJ_G0025042.1 mouse_genomes_project 19 39866729 39867793 - Tctn3 protein_coding retained_intron MGP_LPJ_T0051436.1 MGP_LPJ_G0024990.1 mouse_genomes_project 19 33447526 33449499 + MGP_LPJ_P0051436 protein_coding protein_coding MGP_LPJ_T0051606.1 MGP_LPJ_G0025048.1 mouse_genomes_project 19 40338360 40353415 - MGP_LPJ_P0051606 Opalin protein_coding protein_coding MGP_LPJ_T0052057.1 MGP_LPJ_G0025198.1 mouse_genomes_project 19 57060611 57104990 + MGP_LPJ_P0052057 Tdrd1 protein_coding protein_coding MGP_LPJ_T0052058.1 MGP_LPJ_G0025198.1 mouse_genomes_project 19 57060677 57104990 + MGP_LPJ_P0052058 Tdrd1 protein_coding protein_coding MGP_LPJ_T0052059.1 MGP_LPJ_G0025198.1 mouse_genomes_project 19 57060688 57104990 + MGP_LPJ_P0052059 Tdrd1 protein_coding protein_coding MGP_LPJ_T0052060.1 MGP_LPJ_G0025198.1 mouse_genomes_project 19 57065108 57104990 + MGP_LPJ_P0052060 Tdrd1 protein_coding protein_coding MGP_LPJ_T0051694.1 MGP_LPJ_G0025079.1 mouse_genomes_project 19 42126270 42748175 - MGP_LPJ_P0051694 Hpse2 protein_coding protein_coding MGP_LPJ_T0050384.1 MGP_LPJ_G0024620.1 mouse_genomes_project 19 2307409 2312108 + MGP_LPJ_P0050384 Eif1ad protein_coding protein_coding MGP_LPJ_T0050207.1 MGP_LPJ_G0024561.1 mouse_genomes_project 19 856605 862642 - MGP_LPJ_P0050207 unknown_likely_coding unknown_likely_coding MGP_LPJ_T0051359.1 MGP_LPJ_G0024957.1 mouse_genomes_project 19 28485441 28487672 + MGP_LPJ_P0051359 Trpd52l3 protein_coding protein_coding MGP_LPJ_T0003889.1 MGP_LPJ_G0003482.1 mouse_genomes_project 19 53884564 53891032 - Gm16299 antisense antisense MGP_LPJ_T0051574.1 MGP_LPJ_G0025041.1 mouse_genomes_project 19 39802450 39842293 - MGP_LPJ_P0051574 Aldh18a1 protein_coding protein_coding MGP_LPJ_T0051575.1 MGP_LPJ_G0025041.1 mouse_genomes_project 19 39802450 39842387 - MGP_LPJ_P0051575 Aldh18a1 protein_coding protein_coding MGP_LPJ_T0051576.1 MGP_LPJ_G0025041.1 mouse_genomes_project 19 39803344 39807059 - Aldh18a1 protein_coding retained_intron MGP_LPJ_T0051577.1 MGP_LPJ_G0025041.1 mouse_genomes_project 19 39805620 39806937 - MGP_LPJ_P0051577 Aldh18a1 protein_coding protein_coding MGP_LPJ_T0051578.1 MGP_LPJ_G0025041.1 mouse_genomes_project 19 39809266 39842347 - Aldh18a1 protein_coding retained_intron MGP_LPJ_T0051579.1 MGP_LPJ_G0025041.1 mouse_genomes_project 19 39826658 39842308 - MGP_LPJ_P0051579 Aldh18a1 protein_coding protein_coding MGP_LPJ_T0051580.1 MGP_LPJ_G0025041.1 mouse_genomes_project 19 39829929 39842334 - MGP_LPJ_P0051580 Aldh18a1 protein_coding protein_coding MGP_LPJ_T0051581.1 MGP_LPJ_G0025041.1 mouse_genomes_project 19 39829972 39842306 - MGP_LPJ_P0051581 Aldh18a1 protein_coding protein_coding MGP_LPJ_T0098220.1 MGP_LPJ_G0036501.1 mouse_genomes_project 19 34526599 34526730 - Gm22853 rRNA rRNA MGP_LPJ_T0050881.1 MGP_LPJ_G0024748.1 mouse_genomes_project 19 6137850 6153419 + MGP_LPJ_P0050881 Tut1 protein_coding protein_coding MGP_LPJ_T0100557.1 MGP_LPJ_G0038820.1 mouse_genomes_project 19 61215324 61215443 - Gm26158 snoRNA snoRNA MGP_LPJ_T0050894.1 MGP_LPJ_G0024754.1 mouse_genomes_project 19 7148911 7178710 - MGP_LPJ_P0050894 Incenp protein_coding protein_coding MGP_LPJ_T0007087.1 MGP_LPJ_G0005824.1 mouse_genomes_project 19 22208009 22209668 + 1700021P04Rik lincRNA lincRNA MGP_LPJ_T0010322.1 MGP_LPJ_G0008440.1 mouse_genomes_project 19 33223980 33224089 - Gm23060 miRNA miRNA MGP_LPJ_T0003876.1 MGP_LPJ_G0003472.1 mouse_genomes_project 19 27477136 27480811 + 1700018L02Rik antisense antisense MGP_LPJ_T0010345.1 MGP_LPJ_G0008463.1 mouse_genomes_project 19 61001782 61001871 + Gm25238 miRNA miRNA MGP_LPJ_T0013343.1 MGP_LPJ_G0011434.1 mouse_genomes_project 19 9283750 9284431 - processed_pseudogene processed_pseudogene MGP_LPJ_T0099292.1 MGP_LPJ_G0037555.1 mouse_genomes_project 19 16586546 16586710 + Gm23238 snRNA snRNA MGP_LPJ_T0051792.1 MGP_LPJ_G0025118.1 mouse_genomes_project 19 45086570 45104258 + MGP_LPJ_P0051792 Gm17018 protein_coding protein_coding MGP_LPJ_T0051794.1 MGP_LPJ_G0025118.1 mouse_genomes_project 19 45104255 45105742 + Gm17018 protein_coding antisense MGP_LPJ_T0050368.1 MGP_LPJ_G0024613.1 mouse_genomes_project 19 2031152 2041954 - MGP_LPJ_P0050368 Klc2 protein_coding protein_coding MGP_LPJ_T0050369.1 MGP_LPJ_G0024613.1 mouse_genomes_project 19 2031152 2041694 - MGP_LPJ_P0050369 Klc2 protein_coding protein_coding MGP_LPJ_T0050370.1 MGP_LPJ_G0024613.1 mouse_genomes_project 19 2031152 2041691 - MGP_LPJ_P0050370 Klc2 protein_coding protein_coding MGP_LPJ_T0050371.1 MGP_LPJ_G0024613.1 mouse_genomes_project 19 2031154 2041692 - MGP_LPJ_P0050371 Klc2 protein_coding protein_coding MGP_LPJ_T0050372.1 MGP_LPJ_G0024613.1 mouse_genomes_project 19 2031575 2032887 - Klc2 protein_coding retained_intron MGP_LPJ_T0050373.1 MGP_LPJ_G0024613.1 mouse_genomes_project 19 2032833 2034852 - Klc2 protein_coding retained_intron MGP_LPJ_T0050374.1 MGP_LPJ_G0024613.1 mouse_genomes_project 19 2033773 2035391 - Klc2 protein_coding retained_intron MGP_LPJ_T0050375.1 MGP_LPJ_G0024613.1 mouse_genomes_project 19 2036916 2037417 - Klc2 protein_coding retained_intron MGP_LPJ_T0050376.1 MGP_LPJ_G0024613.1 mouse_genomes_project 19 2037216 2040980 - MGP_LPJ_P0050376 Klc2 protein_coding protein_coding MGP_LPJ_T0100537.1 MGP_LPJ_G0038800.1 mouse_genomes_project 19 6067830 6067978 - Snora57 snoRNA snoRNA MGP_LPJ_T0050566.1 MGP_LPJ_G0024674.1 mouse_genomes_project 19 3239982 3248090 - MGP_LPJ_P0050566 Ppp2r5b protein_coding protein_coding MGP_LPJ_T0050567.1 MGP_LPJ_G0024674.1 mouse_genomes_project 19 3241502 3242697 - Ppp2r5b protein_coding retained_intron MGP_LPJ_T0050568.1 MGP_LPJ_G0024674.1 mouse_genomes_project 19 3246154 3248061 - Ppp2r5b protein_coding processed_transcript MGP_LPJ_T0013366.1 MGP_LPJ_G0011457.1 mouse_genomes_project 19 59143251 59145316 + processed_pseudogene processed_pseudogene MGP_LPJ_T0050457.1 MGP_LPJ_G0024644.1 mouse_genomes_project 19 2688958 2690525 - MGP_LPJ_P0050457 Fam89b protein_coding protein_coding MGP_LPJ_T0050458.1 MGP_LPJ_G0024644.1 mouse_genomes_project 19 2688958 2690505 - MGP_LPJ_P0050458 Fam89b protein_coding protein_coding MGP_LPJ_T0050459.1 MGP_LPJ_G0024644.1 mouse_genomes_project 19 2688958 2690523 - MGP_LPJ_P0050459 Fam89b protein_coding protein_coding MGP_LPJ_T0003890.1 MGP_LPJ_G0003483.1 mouse_genomes_project 19 56572924 56574903 + Gm17197 antisense antisense MGP_LPJ_T0051425.1 MGP_LPJ_G0024983.1 mouse_genomes_project 19 33059643 33076502 - MGP_LPJ_P0051425 Acta2 protein_coding protein_coding MGP_LPJ_T0051127.1 MGP_LPJ_G0024869.1 mouse_genomes_project 19 11232354 11233296 + MGP_LPJ_P0051127 Olfr1489 protein_coding protein_coding MGP_LPJ_T0003859.1 MGP_LPJ_G0003461.1 mouse_genomes_project 19 2810793 2816493 + Frmd8os antisense antisense MGP_LPJ_T0003860.1 MGP_LPJ_G0003461.1 mouse_genomes_project 19 2813612 2816477 + Frmd8os antisense antisense MGP_LPJ_T0050781.1 MGP_LPJ_G0024721.1 mouse_genomes_project 19 4953371 4971839 - MGP_LPJ_P0050781 protein_coding protein_coding MGP_LPJ_T0051299.1 MGP_LPJ_G0024939.1 mouse_genomes_project 19 27258015 27302150 + Slc1a1 protein_coding retained_intron MGP_LPJ_T0051300.1 MGP_LPJ_G0024939.1 mouse_genomes_project 19 27258040 27336981 + MGP_LPJ_P0051300 Slc1a1 protein_coding protein_coding MGP_LPJ_T0051301.1 MGP_LPJ_G0024939.1 mouse_genomes_project 19 27258101 27328968 + Slc1a1 protein_coding retained_intron MGP_LPJ_T0051302.1 MGP_LPJ_G0024939.1 mouse_genomes_project 19 27315707 27334898 + Slc1a1 protein_coding retained_intron MGP_LPJ_T0051304.1 MGP_LPJ_G0024939.1 mouse_genomes_project 19 27318527 27335659 + Slc1a1 protein_coding retained_intron MGP_LPJ_T0050134.1 MGP_LPJ_G0024548.1 mouse_genomes_project 19 556247 610053 + MGP_LPJ_P0050134 Suv420h1 protein_coding protein_coding MGP_LPJ_T0050135.1 MGP_LPJ_G0024548.1 mouse_genomes_project 19 556247 608141 + MGP_LPJ_P0050135 Suv420h1 protein_coding protein_coding MGP_LPJ_T0050136.1 MGP_LPJ_G0024548.1 mouse_genomes_project 19 556247 610052 + MGP_LPJ_P0050136 Suv420h1 protein_coding protein_coding MGP_LPJ_T0050137.1 MGP_LPJ_G0024548.1 mouse_genomes_project 19 556247 608141 + MGP_LPJ_P0050137 Suv420h1 protein_coding protein_coding MGP_LPJ_T0050138.1 MGP_LPJ_G0024548.1 mouse_genomes_project 19 556247 600564 + MGP_LPJ_P0050138 Suv420h1 protein_coding protein_coding MGP_LPJ_T0050139.1 MGP_LPJ_G0024548.1 mouse_genomes_project 19 556349 597528 + MGP_LPJ_P0050139 Suv420h1 protein_coding protein_coding MGP_LPJ_T0050140.1 MGP_LPJ_G0024548.1 mouse_genomes_project 19 556859 600570 + MGP_LPJ_P0050140 Suv420h1 protein_coding protein_coding MGP_LPJ_T0050141.1 MGP_LPJ_G0024548.1 mouse_genomes_project 19 556944 596261 + MGP_LPJ_P0050141 Suv420h1 protein_coding protein_coding MGP_LPJ_T0050142.1 MGP_LPJ_G0024548.1 mouse_genomes_project 19 556960 572675 + Suv420h1 protein_coding retained_intron MGP_LPJ_T0050143.1 MGP_LPJ_G0024548.1 mouse_genomes_project 19 556975 595706 + MGP_LPJ_P0050143 Suv420h1 protein_coding protein_coding MGP_LPJ_T0050144.1 MGP_LPJ_G0024548.1 mouse_genomes_project 19 556992 608438 + MGP_LPJ_P0050144 Suv420h1 protein_coding protein_coding MGP_LPJ_T0050145.1 MGP_LPJ_G0024548.1 mouse_genomes_project 19 556995 583163 + MGP_LPJ_P0050145 Suv420h1 protein_coding protein_coding MGP_LPJ_T0050146.1 MGP_LPJ_G0024548.1 mouse_genomes_project 19 557044 600542 + MGP_LPJ_P0050146 Suv420h1 protein_coding protein_coding MGP_LPJ_T0050147.1 MGP_LPJ_G0024548.1 mouse_genomes_project 19 557059 583181 + MGP_LPJ_P0050147 Suv420h1 protein_coding protein_coding MGP_LPJ_T0050148.1 MGP_LPJ_G0024548.1 mouse_genomes_project 19 557373 586656 + MGP_LPJ_P0050148 Suv420h1 protein_coding protein_coding MGP_LPJ_T0050149.1 MGP_LPJ_G0024548.1 mouse_genomes_project 19 581715 589535 + Suv420h1 protein_coding retained_intron MGP_LPJ_T0050150.1 MGP_LPJ_G0024548.1 mouse_genomes_project 19 595597 598606 + Suv420h1 protein_coding retained_intron MGP_LPJ_T0050165.1 MGP_LPJ_G0024550.1 mouse_genomes_project 19 697319 704371 - Tcirg1 protein_coding retained_intron MGP_LPJ_T0050166.1 MGP_LPJ_G0024550.1 mouse_genomes_project 19 697319 706529 - MGP_LPJ_P0050166 Tcirg1 protein_coding protein_coding MGP_LPJ_T0050167.1 MGP_LPJ_G0024550.1 mouse_genomes_project 19 697319 708432 - MGP_LPJ_P0050167 Tcirg1 protein_coding protein_coding MGP_LPJ_T0050168.1 MGP_LPJ_G0024550.1 mouse_genomes_project 19 697319 708290 - MGP_LPJ_P0050168 Tcirg1 protein_coding protein_coding MGP_LPJ_T0050169.1 MGP_LPJ_G0024550.1 mouse_genomes_project 19 697319 708411 - MGP_LPJ_P0050169 Tcirg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0050170.1 MGP_LPJ_G0024550.1 mouse_genomes_project 19 697539 703322 - MGP_LPJ_P0050170 Tcirg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0050171.1 MGP_LPJ_G0024550.1 mouse_genomes_project 19 697669 698500 - Tcirg1 protein_coding retained_intron MGP_LPJ_T0050172.1 MGP_LPJ_G0024550.1 mouse_genomes_project 19 698340 699101 - Tcirg1 protein_coding retained_intron MGP_LPJ_T0050173.1 MGP_LPJ_G0024550.1 mouse_genomes_project 19 699975 704654 - MGP_LPJ_P0050173 Tcirg1 protein_coding nonsense_mediated_decay MGP_LPJ_T0050174.1 MGP_LPJ_G0024550.1 mouse_genomes_project 19 703541 704545 - Tcirg1 protein_coding retained_intron MGP_LPJ_T0050175.1 MGP_LPJ_G0024550.1 mouse_genomes_project 19 703792 708339 - Tcirg1 protein_coding retained_intron MGP_LPJ_T0050176.1 MGP_LPJ_G0024550.1 mouse_genomes_project 19 703992 705720 - Tcirg1 protein_coding retained_intron MGP_LPJ_T0007079.1 MGP_LPJ_G0005817.1 mouse_genomes_project 19 8386472 8389419 - AW112010 lincRNA lincRNA MGP_LPJ_T0051429.1 MGP_LPJ_G0024986.1 mouse_genomes_project 19 33314125 33350563 - MGP_LPJ_P0051429 Lipa protein_coding protein_coding MGP_LPJ_T0051430.1 MGP_LPJ_G0024986.1 mouse_genomes_project 19 33314125 33350563 - MGP_LPJ_P0051430 Lipa protein_coding protein_coding MGP_LPJ_T0052158.1 MGP_LPJ_G0025231.1 mouse_genomes_project 19 61728178 61732200 - MGP_LPJ_P0052158 Csf2ra protein_coding protein_coding MGP_LPJ_T0050713.1 MGP_LPJ_G0024700.1 mouse_genomes_project 19 3956049 3958963 + MGP_LPJ_P0050713 Trpt1 protein_coding protein_coding MGP_LPJ_T0051323.1 MGP_LPJ_G0024948.1 mouse_genomes_project 19 27804192 27814285 - MGP_LPJ_P0051323 Plgrkt protein_coding protein_coding MGP_LPJ_T0051324.1 MGP_LPJ_G0024948.1 mouse_genomes_project 19 27805704 27807172 - Plgrkt protein_coding retained_intron MGP_LPJ_T0051325.1 MGP_LPJ_G0024948.1 mouse_genomes_project 19 27806339 27817306 - MGP_LPJ_P0051325 Plgrkt protein_coding protein_coding MGP_LPJ_T0051326.1 MGP_LPJ_G0024948.1 mouse_genomes_project 19 27806433 27817723 - MGP_LPJ_P0051326 Plgrkt protein_coding protein_coding MGP_LPJ_T0051327.1 MGP_LPJ_G0024948.1 mouse_genomes_project 19 27814263 27824550 - MGP_LPJ_P0051327 Plgrkt protein_coding protein_coding MGP_LPJ_T0051328.1 MGP_LPJ_G0024948.1 mouse_genomes_project 19 27816752 27819792 - Plgrkt protein_coding processed_transcript MGP_LPJ_T0051329.1 MGP_LPJ_G0024948.1 mouse_genomes_project 19 27817987 27820355 - Plgrkt protein_coding processed_transcript MGP_LPJ_T0051330.1 MGP_LPJ_G0024948.1 mouse_genomes_project 19 27819967 27824632 - Plgrkt protein_coding processed_transcript MGP_LPJ_T0051749.1 MGP_LPJ_G0025098.1 mouse_genomes_project 19 43749710 43751346 + Scd4 protein_coding retained_intron MGP_LPJ_T0051750.1 MGP_LPJ_G0025098.1 mouse_genomes_project 19 43750646 43761686 + MGP_LPJ_P0051750 Scd4 protein_coding unknown_likely_coding MGP_LPJ_T0052039.1 MGP_LPJ_G0025192.1 mouse_genomes_project 19 56611192 56652269 + MGP_LPJ_P0052039 Casp7 protein_coding protein_coding MGP_LPJ_T0051502.1 MGP_LPJ_G0025014.1 mouse_genomes_project 19 37167462 37188749 + MGP_LPJ_P0051502 Cep55 protein_coding protein_coding MGP_LPJ_T0051503.1 MGP_LPJ_G0025014.1 mouse_genomes_project 19 37167477 37187822 + MGP_LPJ_P0051503 Cep55 protein_coding protein_coding MGP_LPJ_T0051504.1 MGP_LPJ_G0025014.1 mouse_genomes_project 19 37167479 37188749 + MGP_LPJ_P0051504 Cep55 protein_coding protein_coding MGP_LPJ_T0100528.1 MGP_LPJ_G0038791.1 mouse_genomes_project 19 901398 901613 - Gm23927 snoRNA snoRNA MGP_LPJ_T0051702.1 MGP_LPJ_G0025083.1 mouse_genomes_project 19 43041167 43052190 - MGP_LPJ_P0051702 Slc25a28 protein_coding protein_coding MGP_LPJ_T0003863.1 MGP_LPJ_G0003463.1 mouse_genomes_project 19 3558973 3560274 - Gm14964 antisense antisense MGP_LPJ_T0003864.1 MGP_LPJ_G0003463.1 mouse_genomes_project 19 3559051 3560051 - Gm14964 antisense antisense MGP_LPJ_T0051655.1 MGP_LPJ_G0025066.1 mouse_genomes_project 19 41355674 41357054 + MGP_LPJ_P0051655 4933411K16Rik protein_coding protein_coding MGP_LPJ_T0050472.1 MGP_LPJ_G0024649.1 mouse_genomes_project 19 2843244 2851194 + MGP_LPJ_P0050472 Slc25a45 protein_coding protein_coding MGP_LPJ_T0050473.1 MGP_LPJ_G0024649.1 mouse_genomes_project 19 2844055 2846024 + MGP_LPJ_P0050473 Slc25a45 protein_coding protein_coding MGP_LPJ_T0050474.1 MGP_LPJ_G0024649.1 mouse_genomes_project 19 2844082 2851200 + MGP_LPJ_P0050474 Slc25a45 protein_coding protein_coding MGP_LPJ_T0050475.1 MGP_LPJ_G0024649.1 mouse_genomes_project 19 2844083 2849913 + MGP_LPJ_P0050475 Slc25a45 protein_coding protein_coding MGP_LPJ_T0050784.1 MGP_LPJ_G0024723.1 mouse_genomes_project 19 5768195 5783433 + MGP_LPJ_P0050784 Slc22a6 protein_coding protein_coding MGP_LPJ_T0050266.1 MGP_LPJ_G0024578.1 mouse_genomes_project 19 1117118 1124573 - MGP_LPJ_P0050266 Ssh3 protein_coding protein_coding MGP_LPJ_T0050267.1 MGP_LPJ_G0024578.1 mouse_genomes_project 19 1117123 1124573 - MGP_LPJ_P0050267 Ssh3 protein_coding protein_coding MGP_LPJ_T0100550.1 MGP_LPJ_G0038813.1 mouse_genomes_project 19 37186203 37186328 + Gm23300 snoRNA snoRNA MGP_LPJ_T0051242.1 MGP_LPJ_G0024926.1 mouse_genomes_project 19 23121039 23163711 - MGP_LPJ_P0051242 Cbwd1 protein_coding protein_coding MGP_LPJ_T0051160.1 MGP_LPJ_G0024891.1 mouse_genomes_project 19 15112817 15146247 - MGP_LPJ_P0051160 Gcnt1 protein_coding protein_coding MGP_LPJ_T0051161.1 MGP_LPJ_G0024891.1 mouse_genomes_project 19 15112819 15129431 - MGP_LPJ_P0051161 Gcnt1 protein_coding protein_coding MGP_LPJ_T0051162.1 MGP_LPJ_G0024891.1 mouse_genomes_project 19 15119849 15146247 - Gcnt1 protein_coding retained_intron MGP_LPJ_T0010306.1 MGP_LPJ_G0008424.1 mouse_genomes_project 19 3866684 3866775 - Mir6990 miRNA miRNA MGP_LPJ_T0051320.1 MGP_LPJ_G0024946.1 mouse_genomes_project 19 27768665 27779540 - MGP_LPJ_P0051320 Insl6 protein_coding protein_coding MGP_LPJ_T0050186.1 MGP_LPJ_G0024555.1 mouse_genomes_project 19 781549 795382 + MGP_LPJ_P0050186 Aldh3b2 protein_coding protein_coding MGP_LPJ_T0051909.1 MGP_LPJ_G0025153.1 mouse_genomes_project 19 46778187 46811058 - MGP_LPJ_P0051909 Calhm2 protein_coding protein_coding MGP_LPJ_T0051910.1 MGP_LPJ_G0025153.1 mouse_genomes_project 19 46804583 46811058 - MGP_LPJ_P0051910 Calhm2 protein_coding protein_coding MGP_LPJ_T0013353.1 MGP_LPJ_G0011444.1 mouse_genomes_project 19 26236659 26237081 + processed_pseudogene processed_pseudogene MGP_LPJ_T0051823.1 MGP_LPJ_G0025125.1 mouse_genomes_project 19 45561852 45564548 + MGP_LPJ_P0051823 Hps6 protein_coding protein_coding MGP_LPJ_T0051656.1 MGP_LPJ_G0025067.1 mouse_genomes_project 19 41379136 41390324 - MGP_LPJ_P0051656 Morn4 protein_coding protein_coding MGP_LPJ_T0013356.1 MGP_LPJ_G0011447.1 mouse_genomes_project 19 27233294 27234091 - processed_pseudogene processed_pseudogene MGP_LPJ_T0051138.1 MGP_LPJ_G0024880.1 mouse_genomes_project 19 11514375 11515460 - MGP_LPJ_P0051138 Olfr1504 protein_coding protein_coding MGP_LPJ_T0010311.1 MGP_LPJ_G0008429.1 mouse_genomes_project 19 7129589 7129693 + Gm22369 miRNA miRNA MGP_LPJ_T0051104.1 MGP_LPJ_G0024846.1 mouse_genomes_project 19 10458903 10459947 - MGP_LPJ_P0051104 Olfr1446 protein_coding protein_coding MGP_LPJ_T0010338.1 MGP_LPJ_G0008456.1 mouse_genomes_project 19 47665624 47665706 - Gm22240 miRNA miRNA MGP_LPJ_T0051753.1 MGP_LPJ_G0025101.1 mouse_genomes_project 19 43954219 43982703 - MGP_LPJ_P0051753 Sec31b protein_coding protein_coding MGP_LPJ_T0051754.1 MGP_LPJ_G0025101.1 mouse_genomes_project 19 43954554 43957513 - MGP_LPJ_P0051754 Sec31b protein_coding nonsense_mediated_decay MGP_LPJ_T0051409.1 MGP_LPJ_G0024975.1 mouse_genomes_project 19 32294668 32367613 - MGP_LPJ_P0051409 protein_coding protein_coding MGP_LPJ_T0051974.1 MGP_LPJ_G0025173.1 mouse_genomes_project 19 53301798 53375616 + MGP_LPJ_P0051974 Mxi1 protein_coding protein_coding MGP_LPJ_T0051975.1 MGP_LPJ_G0025173.1 mouse_genomes_project 19 53323264 53373105 + MGP_LPJ_P0051975 Mxi1 protein_coding protein_coding MGP_LPJ_T0013340.1 MGP_LPJ_G0011431.1 mouse_genomes_project 19 5738674 5739464 - processed_pseudogene processed_pseudogene MGP_LPJ_T0050798.1 MGP_LPJ_G0024728.1 mouse_genomes_project 19 5901805 5918476 + MGP_LPJ_P0050798 Stx5a protein_coding nonsense_mediated_decay MGP_LPJ_T0050799.1 MGP_LPJ_G0024728.1 mouse_genomes_project 19 5901862 5903063 + Stx5a protein_coding retained_intron MGP_LPJ_T0050800.1 MGP_LPJ_G0024728.1 mouse_genomes_project 19 5901880 5918492 + MGP_LPJ_P0050800 Stx5a protein_coding nonsense_mediated_decay MGP_LPJ_T0050801.1 MGP_LPJ_G0024728.1 mouse_genomes_project 19 5901881 5918532 + MGP_LPJ_P0050801 Stx5a protein_coding protein_coding MGP_LPJ_T0050802.1 MGP_LPJ_G0024728.1 mouse_genomes_project 19 5901904 5904919 + Stx5a protein_coding retained_intron MGP_LPJ_T0050803.1 MGP_LPJ_G0024728.1 mouse_genomes_project 19 5902061 5903253 + MGP_LPJ_P0050803 Stx5a protein_coding protein_coding MGP_LPJ_T0050804.1 MGP_LPJ_G0024728.1 mouse_genomes_project 19 5902199 5910165 + MGP_LPJ_P0050804 Stx5a protein_coding protein_coding MGP_LPJ_T0050805.1 MGP_LPJ_G0024728.1 mouse_genomes_project 19 5902280 5918532 + MGP_LPJ_P0050805 Stx5a protein_coding nonsense_mediated_decay MGP_LPJ_T0050806.1 MGP_LPJ_G0024728.1 mouse_genomes_project 19 5902536 5909281 + Stx5a protein_coding retained_intron MGP_LPJ_T0050807.1 MGP_LPJ_G0024728.1 mouse_genomes_project 19 5902665 5917958 + MGP_LPJ_P0050807 Stx5a protein_coding protein_coding MGP_LPJ_T0050808.1 MGP_LPJ_G0024728.1 mouse_genomes_project 19 5903252 5909512 + Stx5a protein_coding retained_intron MGP_LPJ_T0050809.1 MGP_LPJ_G0024728.1 mouse_genomes_project 19 5908895 5917948 + Stx5a protein_coding retained_intron MGP_LPJ_T0050810.1 MGP_LPJ_G0024728.1 mouse_genomes_project 19 5908910 5910106 + Stx5a protein_coding retained_intron MGP_LPJ_T0050811.1 MGP_LPJ_G0024728.1 mouse_genomes_project 19 5908925 5917874 + Stx5a protein_coding retained_intron MGP_LPJ_T0050812.1 MGP_LPJ_G0024728.1 mouse_genomes_project 19 5908982 5909771 + Stx5a protein_coding retained_intron MGP_LPJ_T0050813.1 MGP_LPJ_G0024728.1 mouse_genomes_project 19 5909791 5910487 + MGP_LPJ_P0050813 Stx5a protein_coding protein_coding MGP_LPJ_T0050826.1 MGP_LPJ_G0024730.1 mouse_genomes_project 19 5937518 5939464 - MGP_LPJ_P0050826 Taf6l protein_coding protein_coding MGP_LPJ_T0050827.1 MGP_LPJ_G0024730.1 mouse_genomes_project 19 5939350 5951596 - MGP_LPJ_P0050827 Taf6l protein_coding protein_coding MGP_LPJ_T0050828.1 MGP_LPJ_G0024730.1 mouse_genomes_project 19 5939483 5941959 - Taf6l protein_coding retained_intron MGP_LPJ_T0050829.1 MGP_LPJ_G0024730.1 mouse_genomes_project 19 5939488 5951537 - MGP_LPJ_P0050829 Taf6l protein_coding protein_coding MGP_LPJ_T0050830.1 MGP_LPJ_G0024730.1 mouse_genomes_project 19 5939490 5951596 - MGP_LPJ_P0050830 Taf6l protein_coding protein_coding MGP_LPJ_T0050831.1 MGP_LPJ_G0024730.1 mouse_genomes_project 19 5939492 5951697 - MGP_LPJ_P0050831 Taf6l protein_coding protein_coding MGP_LPJ_T0050832.1 MGP_LPJ_G0024730.1 mouse_genomes_project 19 5939525 5949279 - MGP_LPJ_P0050832 Taf6l protein_coding protein_coding MGP_LPJ_T0050833.1 MGP_LPJ_G0024730.1 mouse_genomes_project 19 5939525 5949279 - MGP_LPJ_P0050833 Taf6l protein_coding protein_coding MGP_LPJ_T0050834.1 MGP_LPJ_G0024730.1 mouse_genomes_project 19 5940433 5944019 - Taf6l protein_coding retained_intron MGP_LPJ_T0050835.1 MGP_LPJ_G0024730.1 mouse_genomes_project 19 5942883 5951561 - Taf6l protein_coding retained_intron MGP_LPJ_T0050836.1 MGP_LPJ_G0024730.1 mouse_genomes_project 19 5943519 5947603 - Taf6l protein_coding processed_transcript MGP_LPJ_T0050837.1 MGP_LPJ_G0024730.1 mouse_genomes_project 19 5943545 5947957 - Taf6l protein_coding retained_intron MGP_LPJ_T0050838.1 MGP_LPJ_G0024730.1 mouse_genomes_project 19 5947090 5951545 - Taf6l protein_coding retained_intron MGP_LPJ_T0052157.1 MGP_LPJ_G0025230.1 mouse_genomes_project 19 61612176 61642636 - MGP_LPJ_P0052157 protein_coding protein_coding MGP_LPJ_T0007083.1 MGP_LPJ_G0005821.1 mouse_genomes_project 19 18358149 18375679 + 1500015L24Rik lincRNA lincRNA MGP_LPJ_T0007084.1 MGP_LPJ_G0005821.1 mouse_genomes_project 19 18375257 18375671 + 1500015L24Rik lincRNA lincRNA MGP_LPJ_T0051878.1 MGP_LPJ_G0025138.1 mouse_genomes_project 19 45993111 46090751 + MGP_LPJ_P0051878 Sufu protein_coding protein_coding MGP_LPJ_T0051879.1 MGP_LPJ_G0025138.1 mouse_genomes_project 19 45993133 46087992 + MGP_LPJ_P0051879 Sufu protein_coding protein_coding MGP_LPJ_T0051880.1 MGP_LPJ_G0025138.1 mouse_genomes_project 19 45993219 46057658 + MGP_LPJ_P0051880 Sufu protein_coding protein_coding MGP_LPJ_T0051881.1 MGP_LPJ_G0025138.1 mouse_genomes_project 19 45993241 46078874 + MGP_LPJ_P0051881 Sufu protein_coding protein_coding MGP_LPJ_T0051882.1 MGP_LPJ_G0025138.1 mouse_genomes_project 19 46059856 46077575 + Sufu protein_coding processed_transcript MGP_LPJ_T0051883.1 MGP_LPJ_G0025138.1 mouse_genomes_project 19 46085034 46087926 + Sufu protein_coding retained_intron MGP_LPJ_T0050468.1 MGP_LPJ_G0024648.1 mouse_genomes_project 19 2814806 2840702 - MGP_LPJ_P0050468 Frmd8 protein_coding protein_coding MGP_LPJ_T0050469.1 MGP_LPJ_G0024648.1 mouse_genomes_project 19 2827528 2829095 - Frmd8 protein_coding retained_intron MGP_LPJ_T0050470.1 MGP_LPJ_G0024648.1 mouse_genomes_project 19 2830596 2838858 - Frmd8 protein_coding retained_intron MGP_LPJ_T0050471.1 MGP_LPJ_G0024648.1 mouse_genomes_project 19 2830682 2840667 - MGP_LPJ_P0050471 Frmd8 protein_coding protein_coding MGP_LPJ_T0050352.1 MGP_LPJ_G0024602.1 mouse_genomes_project 19 1878081 1882775 + MGP_LPJ_P0050352 Mrpl11 protein_coding protein_coding MGP_LPJ_T0007125.1 MGP_LPJ_G0005849.1 mouse_genomes_project 19 55797336 55864561 - lincRNA lincRNA MGP_LPJ_T0098221.1 MGP_LPJ_G0036502.1 mouse_genomes_project 19 36220222 36220328 + Gm23918 rRNA rRNA MGP_LPJ_T0050437.1 MGP_LPJ_G0024639.1 mouse_genomes_project 19 2610552 2624193 - MGP_LPJ_P0050437 Sipa1 protein_coding protein_coding MGP_LPJ_T0050438.1 MGP_LPJ_G0024639.1 mouse_genomes_project 19 2610552 2624193 - MGP_LPJ_P0050438 Sipa1 protein_coding protein_coding MGP_LPJ_T0050439.1 MGP_LPJ_G0024639.1 mouse_genomes_project 19 2610552 2624193 - MGP_LPJ_P0050439 Sipa1 protein_coding protein_coding MGP_LPJ_T0050440.1 MGP_LPJ_G0024639.1 mouse_genomes_project 19 2610552 2624193 - MGP_LPJ_P0050440 Sipa1 protein_coding protein_coding MGP_LPJ_T0050360.1 MGP_LPJ_G0024609.1 mouse_genomes_project 19 1992802 1994076 - Tmem151a protein_coding processed_transcript MGP_LPJ_T0050361.1 MGP_LPJ_G0024609.1 mouse_genomes_project 19 1992978 2008747 - MGP_LPJ_P0050361 Tmem151a protein_coding protein_coding MGP_LPJ_T0050362.1 MGP_LPJ_G0024609.1 mouse_genomes_project 19 1993797 2008747 - MGP_LPJ_P0050362 Tmem151a protein_coding protein_coding MGP_LPJ_T0050363.1 MGP_LPJ_G0024609.1 mouse_genomes_project 19 2002589 2008791 - MGP_LPJ_P0050363 Tmem151a protein_coding protein_coding MGP_LPJ_T0050364.1 MGP_LPJ_G0024609.1 mouse_genomes_project 19 2006161 2008141 - Tmem151a protein_coding processed_transcript MGP_LPJ_T0010337.1 MGP_LPJ_G0008455.1 mouse_genomes_project 19 47472967 47473103 - Mir8090 miRNA miRNA MGP_LPJ_T0050764.1 MGP_LPJ_G0024715.1 mouse_genomes_project 19 4593316 4603848 - MGP_LPJ_P0050764 Lgals12 protein_coding protein_coding MGP_LPJ_T0050765.1 MGP_LPJ_G0024715.1 mouse_genomes_project 19 4593317 4603833 - MGP_LPJ_P0050765 Lgals12 protein_coding protein_coding MGP_LPJ_T0050766.1 MGP_LPJ_G0024715.1 mouse_genomes_project 19 4593370 4603758 - MGP_LPJ_P0050766 Lgals12 protein_coding protein_coding MGP_LPJ_T0051195.1 MGP_LPJ_G0024904.1 mouse_genomes_project 19 19265907 19274252 + MGP_LPJ_P0051195 protein_coding unknown_likely_coding MGP_LPJ_T0051196.1 MGP_LPJ_G0024904.1 mouse_genomes_project 19 19266367 19274114 + MGP_LPJ_P0051196 protein_coding nonsense_mediated_decay MGP_LPJ_T0051197.1 MGP_LPJ_G0024904.1 mouse_genomes_project 19 19266926 19270719 + MGP_LPJ_P0051197 protein_coding protein_coding MGP_LPJ_T0051198.1 MGP_LPJ_G0024904.1 mouse_genomes_project 19 19269660 19274345 + protein_coding retained_intron MGP_LPJ_T0051199.1 MGP_LPJ_G0024904.1 mouse_genomes_project 19 19269720 19277842 + protein_coding retained_intron MGP_LPJ_T0013347.1 MGP_LPJ_G0011438.1 mouse_genomes_project 19 13643016 13643572 + processed_pseudogene processed_pseudogene MGP_LPJ_T0051748.1 MGP_LPJ_G0025097.1 mouse_genomes_project 19 43706429 43721004 + MGP_LPJ_P0051748 Scd2 protein_coding protein_coding MGP_LPJ_T0007111.1 MGP_LPJ_G0005840.1 mouse_genomes_project 19 44820134 44821082 - Gm29593 lincRNA lincRNA MGP_LPJ_T0050941.1 MGP_LPJ_G0024776.1 mouse_genomes_project 19 7985121 8001734 - MGP_LPJ_P0050941 Pga5 protein_coding unknown_likely_coding MGP_LPJ_T0050942.1 MGP_LPJ_G0024776.1 mouse_genomes_project 19 7985125 7995281 - MGP_LPJ_P0050942 Pga5 protein_coding protein_coding MGP_LPJ_T0051937.1 MGP_LPJ_G0025162.1 mouse_genomes_project 19 47446083 47450868 + MGP_LPJ_P0051937 Sfr1 protein_coding protein_coding MGP_LPJ_T0050691.1 MGP_LPJ_G0024691.1 mouse_genomes_project 19 3877969 3886333 - MGP_LPJ_P0050691 Kcnk4 protein_coding unknown_likely_coding MGP_LPJ_T0007112.1 MGP_LPJ_G0005841.1 mouse_genomes_project 19 44826714 44827235 + Gm29594 lincRNA lincRNA MGP_LPJ_T0050257.1 MGP_LPJ_G0024572.1 mouse_genomes_project 19 996152 1007308 - MGP_LPJ_P0050257 Carns1 protein_coding protein_coding MGP_LPJ_T0051120.1 MGP_LPJ_G0024862.1 mouse_genomes_project 19 10942267 10943194 + MGP_LPJ_P0051120 Olfr1467 protein_coding protein_coding MGP_LPJ_T0051133.1 MGP_LPJ_G0024875.1 mouse_genomes_project 19 11401798 11402743 - MGP_LPJ_P0051133 Olfr1497 protein_coding protein_coding MGP_LPJ_T0051369.1 MGP_LPJ_G0024959.1 mouse_genomes_project 19 28590046 28675121 - MGP_LPJ_P0051369 Gldc protein_coding protein_coding MGP_LPJ_T0007103.1 MGP_LPJ_G0005834.1 mouse_genomes_project 19 37163989 37166971 - I830134H01Rik lincRNA lincRNA MGP_LPJ_T0007104.1 MGP_LPJ_G0005834.1 mouse_genomes_project 19 37164099 37166971 - I830134H01Rik lincRNA lincRNA MGP_LPJ_T0013338.1 MGP_LPJ_G0011429.1 mouse_genomes_project 19 4699321 4700437 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010315.1 MGP_LPJ_G0008433.1 mouse_genomes_project 19 15712903 15712996 - Gm23063 miRNA miRNA MGP_LPJ_T0050344.1 MGP_LPJ_G0024600.1 mouse_genomes_project 19 1820596 1842913 - MGP_LPJ_P0050344 Dpp3 protein_coding protein_coding MGP_LPJ_T0050415.1 MGP_LPJ_G0024630.1 mouse_genomes_project 19 2431027 2438683 - MGP_LPJ_P0050415 Mus81 protein_coding nonsense_mediated_decay MGP_LPJ_T0050416.1 MGP_LPJ_G0024630.1 mouse_genomes_project 19 2431645 2438789 - MGP_LPJ_P0050416 Mus81 protein_coding unknown_likely_coding MGP_LPJ_T0050417.1 MGP_LPJ_G0024630.1 mouse_genomes_project 19 2432195 2439069 - MGP_LPJ_P0050417 Mus81 protein_coding protein_coding MGP_LPJ_T0050418.1 MGP_LPJ_G0024630.1 mouse_genomes_project 19 2432214 2438602 - Mus81 protein_coding retained_intron MGP_LPJ_T0050419.1 MGP_LPJ_G0024630.1 mouse_genomes_project 19 2432217 2434634 - Mus81 protein_coding retained_intron MGP_LPJ_T0050420.1 MGP_LPJ_G0024630.1 mouse_genomes_project 19 2432221 2438952 - MGP_LPJ_P0050420 Mus81 protein_coding nonsense_mediated_decay MGP_LPJ_T0050421.1 MGP_LPJ_G0024630.1 mouse_genomes_project 19 2434356 2435552 - Mus81 protein_coding retained_intron MGP_LPJ_T0050422.1 MGP_LPJ_G0024630.1 mouse_genomes_project 19 2434878 2436477 - Mus81 protein_coding processed_transcript MGP_LPJ_T0050423.1 MGP_LPJ_G0024630.1 mouse_genomes_project 19 2436154 2438933 - MGP_LPJ_P0050423 Mus81 protein_coding nonsense_mediated_decay MGP_LPJ_T0050424.1 MGP_LPJ_G0024630.1 mouse_genomes_project 19 2438134 2438978 - Mus81 protein_coding retained_intron MGP_LPJ_T0051140.1 MGP_LPJ_G0024882.1 mouse_genomes_project 19 12092007 12250967 - MGP_LPJ_P0051140 Tle4 protein_coding protein_coding MGP_LPJ_T0051141.1 MGP_LPJ_G0024882.1 mouse_genomes_project 19 12092085 12251035 - MGP_LPJ_P0051141 Tle4 protein_coding protein_coding MGP_LPJ_T0051143.1 MGP_LPJ_G0024884.1 mouse_genomes_project 19 13604344 13624724 - MGP_LPJ_P0051143 Psat1 protein_coding protein_coding MGP_LPJ_T0051144.1 MGP_LPJ_G0024884.1 mouse_genomes_project 19 13604793 13624287 - MGP_LPJ_P0051144 Psat1 protein_coding protein_coding MGP_LPJ_T0051145.1 MGP_LPJ_G0024884.1 mouse_genomes_project 19 13604796 13609379 - Psat1 protein_coding retained_intron MGP_LPJ_T0051146.1 MGP_LPJ_G0024884.1 mouse_genomes_project 19 13614675 13646742 - MGP_LPJ_P0051146 Psat1 protein_coding protein_coding MGP_LPJ_T0051147.1 MGP_LPJ_G0024884.1 mouse_genomes_project 19 13616505 13618004 - Psat1 protein_coding processed_transcript MGP_LPJ_T0051148.1 MGP_LPJ_G0024884.1 mouse_genomes_project 19 13618069 13621074 - Psat1 protein_coding retained_intron MGP_LPJ_T0051149.1 MGP_LPJ_G0024884.1 mouse_genomes_project 19 13620164 13624595 - Psat1 protein_coding retained_intron MGP_LPJ_T0051313.1 MGP_LPJ_G0024942.1 mouse_genomes_project 19 27419770 27448460 + MGP_LPJ_P0051313 Cdc37l1 protein_coding protein_coding MGP_LPJ_T0051314.1 MGP_LPJ_G0024942.1 mouse_genomes_project 19 27419814 27443694 + MGP_LPJ_P0051314 Cdc37l1 protein_coding unknown_likely_coding MGP_LPJ_T0051904.1 MGP_LPJ_G0025148.1 mouse_genomes_project 19 46679909 46690550 + MGP_LPJ_P0051904 Ina protein_coding protein_coding MGP_LPJ_T0051332.1 MGP_LPJ_G0024950.1 mouse_genomes_project 19 27870376 27931765 + MGP_LPJ_P0051332 Pdcd1lg2 protein_coding protein_coding MGP_LPJ_T0051597.1 MGP_LPJ_G0025044.1 mouse_genomes_project 19 40097609 40114639 + MGP_LPJ_P0051597 Ccnj protein_coding protein_coding MGP_LPJ_T0051598.1 MGP_LPJ_G0025044.1 mouse_genomes_project 19 40097609 40114639 + MGP_LPJ_P0051598 Ccnj protein_coding protein_coding MGP_LPJ_T0051599.1 MGP_LPJ_G0025044.1 mouse_genomes_project 19 40097638 40114076 + MGP_LPJ_P0051599 Ccnj protein_coding protein_coding MGP_LPJ_T0011487.1 MGP_LPJ_G0009605.1 mouse_genomes_project 19 2809808 2809918 - Gm27505 misc_RNA misc_RNA MGP_LPJ_T0013357.1 MGP_LPJ_G0011448.1 mouse_genomes_project 19 27285278 27286657 - processed_pseudogene processed_pseudogene MGP_LPJ_T0098408.1 MGP_LPJ_G0036689.1 mouse_genomes_project 19 9086491 9086567 + Gm25443 scaRNA scaRNA MGP_LPJ_T0050580.1 MGP_LPJ_G0024678.1 mouse_genomes_project 19 3351177 3357079 + MGP_LPJ_P0050580 Men1 protein_coding protein_coding MGP_LPJ_T0050581.1 MGP_LPJ_G0024678.1 mouse_genomes_project 19 3351177 3357090 + MGP_LPJ_P0050581 Men1 protein_coding protein_coding MGP_LPJ_T0050582.1 MGP_LPJ_G0024678.1 mouse_genomes_project 19 3351211 3357088 + MGP_LPJ_P0050582 Men1 protein_coding protein_coding MGP_LPJ_T0050583.1 MGP_LPJ_G0024678.1 mouse_genomes_project 19 3351237 3357088 + MGP_LPJ_P0050583 Men1 protein_coding protein_coding MGP_LPJ_T0050584.1 MGP_LPJ_G0024678.1 mouse_genomes_project 19 3351237 3357088 + MGP_LPJ_P0050584 Men1 protein_coding protein_coding MGP_LPJ_T0050585.1 MGP_LPJ_G0024678.1 mouse_genomes_project 19 3351244 3357090 + Men1 protein_coding retained_intron MGP_LPJ_T0050586.1 MGP_LPJ_G0024678.1 mouse_genomes_project 19 3351245 3356982 + MGP_LPJ_P0050586 Men1 protein_coding protein_coding MGP_LPJ_T0050587.1 MGP_LPJ_G0024678.1 mouse_genomes_project 19 3351262 3356662 + MGP_LPJ_P0050587 Men1 protein_coding protein_coding MGP_LPJ_T0050588.1 MGP_LPJ_G0024678.1 mouse_genomes_project 19 3351309 3357088 + MGP_LPJ_P0050588 Men1 protein_coding protein_coding MGP_LPJ_T0050589.1 MGP_LPJ_G0024678.1 mouse_genomes_project 19 3351659 3356371 + MGP_LPJ_P0050589 Men1 protein_coding protein_coding MGP_LPJ_T0050590.1 MGP_LPJ_G0024678.1 mouse_genomes_project 19 3353108 3354607 + MGP_LPJ_P0050590 Men1 protein_coding protein_coding MGP_LPJ_T0050591.1 MGP_LPJ_G0024678.1 mouse_genomes_project 19 3356045 3357011 + MGP_LPJ_P0050591 Men1 protein_coding nonsense_mediated_decay MGP_LPJ_T0050715.1 MGP_LPJ_G0024702.1 mouse_genomes_project 19 3984512 4008348 - MGP_LPJ_P0050715 Stip1 protein_coding protein_coding MGP_LPJ_T0051531.1 MGP_LPJ_G0025024.1 mouse_genomes_project 19 38108209 38148754 + MGP_LPJ_P0051531 Hells protein_coding protein_coding MGP_LPJ_T0051532.1 MGP_LPJ_G0025024.1 mouse_genomes_project 19 38108324 38117738 + Hells protein_coding retained_intron MGP_LPJ_T0051533.1 MGP_LPJ_G0025024.1 mouse_genomes_project 19 38108468 38121160 + MGP_LPJ_P0051533 Hells protein_coding protein_coding MGP_LPJ_T0051534.1 MGP_LPJ_G0025024.1 mouse_genomes_project 19 38108684 38130779 + Hells protein_coding processed_transcript MGP_LPJ_T0051535.1 MGP_LPJ_G0025024.1 mouse_genomes_project 19 38111802 38117839 + Hells protein_coding retained_intron MGP_LPJ_T0051536.1 MGP_LPJ_G0025024.1 mouse_genomes_project 19 38120934 38127721 + Hells protein_coding processed_transcript MGP_LPJ_T0050394.1 MGP_LPJ_G0024624.1 mouse_genomes_project 19 2372035 2374192 + AI837181 protein_coding processed_transcript MGP_LPJ_T0050395.1 MGP_LPJ_G0024624.1 mouse_genomes_project 19 2372035 2374192 + MGP_LPJ_P0050395 AI837181 protein_coding protein_coding MGP_LPJ_T0051054.1 MGP_LPJ_G0024813.1 mouse_genomes_project 19 9162300 9166830 + MGP_LPJ_P0051054 Mrpl16 protein_coding protein_coding MGP_LPJ_T0051185.1 MGP_LPJ_G0024900.1 mouse_genomes_project 19 18326881 18343954 - MGP_LPJ_P0051185 Anxa1 protein_coding protein_coding MGP_LPJ_T0051186.1 MGP_LPJ_G0024900.1 mouse_genomes_project 19 18327009 18343682 - Anxa1 protein_coding processed_transcript MGP_LPJ_T0051187.1 MGP_LPJ_G0024900.1 mouse_genomes_project 19 18327009 18328727 - Anxa1 protein_coding retained_intron MGP_LPJ_T0051188.1 MGP_LPJ_G0024900.1 mouse_genomes_project 19 18330780 18331603 - Anxa1 protein_coding retained_intron MGP_LPJ_T0051189.1 MGP_LPJ_G0024900.1 mouse_genomes_project 19 18330780 18333043 - Anxa1 protein_coding retained_intron MGP_LPJ_T0051190.1 MGP_LPJ_G0024900.1 mouse_genomes_project 19 18331131 18335143 - Anxa1 protein_coding retained_intron MGP_LPJ_T0051191.1 MGP_LPJ_G0024900.1 mouse_genomes_project 19 18332680 18343661 - Anxa1 protein_coding processed_transcript MGP_LPJ_T0052108.1 MGP_LPJ_G0025210.1 mouse_genomes_project 19 59138873 59149880 - MGP_LPJ_P0052108 1700019N19Rik protein_coding protein_coding MGP_LPJ_T0052109.1 MGP_LPJ_G0025210.1 mouse_genomes_project 19 59139066 59148695 - MGP_LPJ_P0052109 1700019N19Rik protein_coding protein_coding MGP_LPJ_T0051604.1 MGP_LPJ_G0025047.1 mouse_genomes_project 19 40304108 40335410 + MGP_LPJ_P0051604 Dntt protein_coding protein_coding MGP_LPJ_T0051605.1 MGP_LPJ_G0025047.1 mouse_genomes_project 19 40304108 40335410 + MGP_LPJ_P0051605 Dntt protein_coding protein_coding MGP_LPJ_T0051497.1 MGP_LPJ_G0025011.1 mouse_genomes_project 19 36781801 36789608 + MGP_LPJ_P0051497 Cyp26c1 protein_coding protein_coding MGP_LPJ_T0052062.1 MGP_LPJ_G0025200.1 mouse_genomes_project 19 57150627 57251216 - MGP_LPJ_P0052062 Afap1l2 protein_coding protein_coding MGP_LPJ_T0052063.1 MGP_LPJ_G0025200.1 mouse_genomes_project 19 57150627 57251198 - MGP_LPJ_P0052063 Afap1l2 protein_coding protein_coding MGP_LPJ_T0052064.1 MGP_LPJ_G0025200.1 mouse_genomes_project 19 57150627 57251186 - MGP_LPJ_P0052064 Afap1l2 protein_coding protein_coding MGP_LPJ_T0052065.1 MGP_LPJ_G0025200.1 mouse_genomes_project 19 57151648 57251154 - MGP_LPJ_P0052065 Afap1l2 protein_coding unknown_likely_coding MGP_LPJ_T0052066.1 MGP_LPJ_G0025200.1 mouse_genomes_project 19 57158664 57166817 - Afap1l2 protein_coding retained_intron MGP_LPJ_T0052067.1 MGP_LPJ_G0025200.1 mouse_genomes_project 19 57161803 57251216 - MGP_LPJ_P0052067 Afap1l2 protein_coding protein_coding MGP_LPJ_T0052068.1 MGP_LPJ_G0025200.1 mouse_genomes_project 19 57168301 57242477 - MGP_LPJ_P0052068 Afap1l2 protein_coding protein_coding MGP_LPJ_T0052069.1 MGP_LPJ_G0025200.1 mouse_genomes_project 19 57182181 57251196 - Afap1l2 protein_coding retained_intron MGP_LPJ_T0050441.1 MGP_LPJ_G0024640.1 mouse_genomes_project 19 2625113 2649275 - MGP_LPJ_P0050441 Pcnx3 protein_coding protein_coding MGP_LPJ_T0050442.1 MGP_LPJ_G0024640.1 mouse_genomes_project 19 2625116 2634478 - Pcnx3 protein_coding retained_intron MGP_LPJ_T0050443.1 MGP_LPJ_G0024640.1 mouse_genomes_project 19 2625118 2648516 - MGP_LPJ_P0050443 Pcnx3 protein_coding protein_coding MGP_LPJ_T0050444.1 MGP_LPJ_G0024640.1 mouse_genomes_project 19 2625714 2626677 - Pcnx3 protein_coding retained_intron MGP_LPJ_T0050445.1 MGP_LPJ_G0024640.1 mouse_genomes_project 19 2625894 2627461 - MGP_LPJ_P0050445 Pcnx3 protein_coding nonsense_mediated_decay MGP_LPJ_T0050446.1 MGP_LPJ_G0024640.1 mouse_genomes_project 19 2626469 2627005 - Pcnx3 protein_coding retained_intron MGP_LPJ_T0050447.1 MGP_LPJ_G0024640.1 mouse_genomes_project 19 2633822 2644647 - MGP_LPJ_P0050447 Pcnx3 protein_coding protein_coding MGP_LPJ_T0050448.1 MGP_LPJ_G0024640.1 mouse_genomes_project 19 2635453 2639555 - MGP_LPJ_P0050448 Pcnx3 protein_coding protein_coding MGP_LPJ_T0050449.1 MGP_LPJ_G0024640.1 mouse_genomes_project 19 2638960 2643321 - MGP_LPJ_P0050449 Pcnx3 protein_coding protein_coding MGP_LPJ_T0050450.1 MGP_LPJ_G0024640.1 mouse_genomes_project 19 2639380 2643851 - MGP_LPJ_P0050450 Pcnx3 protein_coding protein_coding MGP_LPJ_T0050451.1 MGP_LPJ_G0024640.1 mouse_genomes_project 19 2639911 2641514 - Pcnx3 protein_coding retained_intron MGP_LPJ_T0050452.1 MGP_LPJ_G0024640.1 mouse_genomes_project 19 2643718 2649062 - Pcnx3 protein_coding retained_intron MGP_LPJ_T0099286.1 MGP_LPJ_G0037549.1 mouse_genomes_project 19 4219706 4219810 + Gm22113 snRNA snRNA MGP_LPJ_T0052121.1 MGP_LPJ_G0025218.1 mouse_genomes_project 19 59847826 59856283 + MGP_LPJ_P0052121 Emx2 protein_coding protein_coding MGP_LPJ_T0052122.1 MGP_LPJ_G0025218.1 mouse_genomes_project 19 59848974 59856279 + MGP_LPJ_P0052122 Emx2 protein_coding protein_coding MGP_LPJ_T0052123.1 MGP_LPJ_G0025218.1 mouse_genomes_project 19 59852216 59855132 + Emx2 protein_coding processed_transcript MGP_LPJ_T0051662.1 MGP_LPJ_G0025071.1 mouse_genomes_project 19 41474805 41488581 + Zfyve27 protein_coding retained_intron MGP_LPJ_T0051663.1 MGP_LPJ_G0025071.1 mouse_genomes_project 19 41481419 41505442 + MGP_LPJ_P0051663 Zfyve27 protein_coding protein_coding MGP_LPJ_T0051664.1 MGP_LPJ_G0025071.1 mouse_genomes_project 19 41481446 41502571 + MGP_LPJ_P0051664 Zfyve27 protein_coding protein_coding MGP_LPJ_T0051665.1 MGP_LPJ_G0025071.1 mouse_genomes_project 19 41481552 41484059 + Zfyve27 protein_coding retained_intron MGP_LPJ_T0051666.1 MGP_LPJ_G0025071.1 mouse_genomes_project 19 41489673 41495010 + MGP_LPJ_P0051666 Zfyve27 protein_coding protein_coding MGP_LPJ_T0051667.1 MGP_LPJ_G0025071.1 mouse_genomes_project 19 41494335 41495679 + Zfyve27 protein_coding retained_intron MGP_LPJ_T0051668.1 MGP_LPJ_G0025071.1 mouse_genomes_project 19 41496185 41501368 + Zfyve27 protein_coding retained_intron MGP_LPJ_T0051669.1 MGP_LPJ_G0025071.1 mouse_genomes_project 19 41496459 41501748 + Zfyve27 protein_coding retained_intron MGP_LPJ_T0051227.1 MGP_LPJ_G0024917.1 mouse_genomes_project 19 21879911 22084574 + MGP_LPJ_P0051227 Apba1 protein_coding protein_coding MGP_LPJ_T0051102.1 MGP_LPJ_G0024844.1 mouse_genomes_project 19 10430981 10432011 + MGP_LPJ_P0051102 Olfr1444 protein_coding protein_coding MGP_LPJ_T0099299.1 MGP_LPJ_G0037562.1 mouse_genomes_project 19 36276347 36276450 - Gm25268 snRNA snRNA MGP_LPJ_T0007077.1 MGP_LPJ_G0005815.1 mouse_genomes_project 19 7694902 7697508 - Gm26859 lincRNA lincRNA MGP_LPJ_T0051971.1 MGP_LPJ_G0025172.1 mouse_genomes_project 19 53120404 53235015 + MGP_LPJ_P0051971 Add3 protein_coding protein_coding MGP_LPJ_T0051972.1 MGP_LPJ_G0025172.1 mouse_genomes_project 19 53122715 53235015 + MGP_LPJ_P0051972 Add3 protein_coding protein_coding MGP_LPJ_T0051973.1 MGP_LPJ_G0025172.1 mouse_genomes_project 19 53123948 53235015 + MGP_LPJ_P0051973 Add3 protein_coding protein_coding MGP_LPJ_T0007129.1 MGP_LPJ_G0005853.1 mouse_genomes_project 19 60291678 60296519 - Gm17203 lincRNA lincRNA MGP_LPJ_T0010330.1 MGP_LPJ_G0008448.1 mouse_genomes_project 19 41596091 41596188 + Gm26339 miRNA miRNA MGP_LPJ_T0050518.1 MGP_LPJ_G0024662.1 mouse_genomes_project 19 3075292 3087771 - MGP_LPJ_P0050518 Vps51 protein_coding protein_coding MGP_LPJ_T0050519.1 MGP_LPJ_G0024662.1 mouse_genomes_project 19 3075440 3076770 - Vps51 protein_coding retained_intron MGP_LPJ_T0050520.1 MGP_LPJ_G0024662.1 mouse_genomes_project 19 3075444 3084648 - MGP_LPJ_P0050520 Vps51 protein_coding protein_coding MGP_LPJ_T0050521.1 MGP_LPJ_G0024662.1 mouse_genomes_project 19 3075501 3076601 - Vps51 protein_coding retained_intron MGP_LPJ_T0050522.1 MGP_LPJ_G0024662.1 mouse_genomes_project 19 3075667 3076522 - MGP_LPJ_P0050522 Vps51 protein_coding protein_coding MGP_LPJ_T0050523.1 MGP_LPJ_G0024662.1 mouse_genomes_project 19 3076199 3077064 - Vps51 protein_coding retained_intron MGP_LPJ_T0050524.1 MGP_LPJ_G0024662.1 mouse_genomes_project 19 3076318 3077149 - Vps51 protein_coding retained_intron MGP_LPJ_T0050525.1 MGP_LPJ_G0024662.1 mouse_genomes_project 19 3077531 3084654 - Vps51 protein_coding retained_intron MGP_LPJ_T0050526.1 MGP_LPJ_G0024662.1 mouse_genomes_project 19 3078867 3084319 - Vps51 protein_coding retained_intron MGP_LPJ_T0050527.1 MGP_LPJ_G0024662.1 mouse_genomes_project 19 3078932 3084649 - MGP_LPJ_P0050527 Vps51 protein_coding nonsense_mediated_decay MGP_LPJ_T0050528.1 MGP_LPJ_G0024662.1 mouse_genomes_project 19 3083353 3084651 - MGP_LPJ_P0050528 Vps51 protein_coding protein_coding MGP_LPJ_T0011495.1 MGP_LPJ_G0009613.1 mouse_genomes_project 19 31644302 31644661 - Gm22482 misc_RNA misc_RNA MGP_LPJ_T0050183.1 MGP_LPJ_G0024554.1 mouse_genomes_project 19 766573 781331 + MGP_LPJ_P0050183 Aldh3b3 protein_coding protein_coding MGP_LPJ_T0050184.1 MGP_LPJ_G0024554.1 mouse_genomes_project 19 766734 781330 + MGP_LPJ_P0050184 Aldh3b3 protein_coding nonsense_mediated_decay MGP_LPJ_T0050185.1 MGP_LPJ_G0024554.1 mouse_genomes_project 19 775165 779666 + MGP_LPJ_P0050185 Aldh3b3 protein_coding protein_coding MGP_LPJ_T0051413.1 MGP_LPJ_G0024978.1 mouse_genomes_project 19 32828918 32869231 + MGP_LPJ_P0051413 Lipk protein_coding protein_coding MGP_LPJ_T0051224.1 MGP_LPJ_G0024914.1 mouse_genomes_project 19 21664776 21769058 - MGP_LPJ_P0051224 1700028P14Rik protein_coding protein_coding MGP_LPJ_T0050864.1 MGP_LPJ_G0024741.1 mouse_genomes_project 19 6068218 6075169 + MGP_LPJ_P0050864 Ints5 protein_coding protein_coding MGP_LPJ_T0050867.1 MGP_LPJ_G0024741.1 mouse_genomes_project 19 6070722 6075419 + Ints5 protein_coding processed_transcript MGP_LPJ_T0050868.1 MGP_LPJ_G0024741.1 mouse_genomes_project 19 6073180 6078082 + MGP_LPJ_P0050868 Ints5 protein_coding protein_coding MGP_LPJ_T0102002.1 MGP_LPJ_G0040039.1 mouse_genomes_project 19 32648504 32653230 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0050869.1 MGP_LPJ_G0024743.1 mouse_genomes_project 19 6078281 6097927 + MGP_LPJ_P0050869 Ganab protein_coding protein_coding MGP_LPJ_T0050870.1 MGP_LPJ_G0024743.1 mouse_genomes_project 19 6078313 6097933 + MGP_LPJ_P0050870 Ganab protein_coding unknown_likely_coding MGP_LPJ_T0101997.1 MGP_LPJ_G0040034.1 mouse_genomes_project 19 6523463 6535779 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0051005.1 MGP_LPJ_G0024798.1 mouse_genomes_project 19 8668144 8683032 - MGP_LPJ_P0051005 Ms4a7 protein_coding protein_coding MGP_LPJ_T0051006.1 MGP_LPJ_G0024798.1 mouse_genomes_project 19 8668144 8684481 - MGP_LPJ_P0051006 Ms4a7 protein_coding protein_coding MGP_LPJ_T0051007.1 MGP_LPJ_G0024798.1 mouse_genomes_project 19 8668511 8684453 - MGP_LPJ_P0051007 Ms4a7 protein_coding protein_coding MGP_LPJ_T0051008.1 MGP_LPJ_G0024798.1 mouse_genomes_project 19 8668514 8671687 - MGP_LPJ_P0051008 Ms4a7 protein_coding protein_coding MGP_LPJ_T0051009.1 MGP_LPJ_G0024798.1 mouse_genomes_project 19 8668610 8684483 - Ms4a7 protein_coding retained_intron MGP_LPJ_T0050400.1 MGP_LPJ_G0024628.1 mouse_genomes_project 19 2413941 2417200 - MGP_LPJ_P0050400 Ctsw protein_coding protein_coding MGP_LPJ_T0050716.1 MGP_LPJ_G0024703.1 mouse_genomes_project 19 4026939 4169535 + MGP_LPJ_P0050716 Macrod1 protein_coding protein_coding MGP_LPJ_T0050382.1 MGP_LPJ_G0024619.1 mouse_genomes_project 19 2305236 2307242 - MGP_LPJ_P0050382 Banf1 protein_coding protein_coding MGP_LPJ_T0050383.1 MGP_LPJ_G0024619.1 mouse_genomes_project 19 2305236 2306944 - MGP_LPJ_P0050383 Banf1 protein_coding protein_coding MGP_LPJ_T0051132.1 MGP_LPJ_G0024874.1 mouse_genomes_project 19 11381722 11382789 + MGP_LPJ_P0051132 Olfr1496 protein_coding protein_coding MGP_LPJ_T0051832.1 MGP_LPJ_G0025127.1 mouse_genomes_project 19 45613032 45632756 + Pprc1 protein_coding processed_transcript MGP_LPJ_T0051833.1 MGP_LPJ_G0025127.1 mouse_genomes_project 19 45627090 45643459 + MGP_LPJ_P0051833 Pprc1 protein_coding protein_coding MGP_LPJ_T0051834.1 MGP_LPJ_G0025127.1 mouse_genomes_project 19 45627132 45643463 + MGP_LPJ_P0051834 Pprc1 protein_coding protein_coding MGP_LPJ_T0051835.1 MGP_LPJ_G0025127.1 mouse_genomes_project 19 45627135 45643457 + MGP_LPJ_P0051835 Pprc1 protein_coding protein_coding MGP_LPJ_T0051836.1 MGP_LPJ_G0025127.1 mouse_genomes_project 19 45627383 45632016 + Pprc1 protein_coding processed_transcript MGP_LPJ_T0051837.1 MGP_LPJ_G0025127.1 mouse_genomes_project 19 45627383 45632997 + MGP_LPJ_P0051837 Pprc1 protein_coding protein_coding MGP_LPJ_T0051838.1 MGP_LPJ_G0025127.1 mouse_genomes_project 19 45627415 45633362 + MGP_LPJ_P0051838 Pprc1 protein_coding protein_coding MGP_LPJ_T0051839.1 MGP_LPJ_G0025127.1 mouse_genomes_project 19 45627787 45633187 + MGP_LPJ_P0051839 Pprc1 protein_coding protein_coding MGP_LPJ_T0051840.1 MGP_LPJ_G0025127.1 mouse_genomes_project 19 45627810 45633203 + MGP_LPJ_P0051840 Pprc1 protein_coding protein_coding MGP_LPJ_T0051841.1 MGP_LPJ_G0025127.1 mouse_genomes_project 19 45634636 45643350 + Pprc1 protein_coding retained_intron MGP_LPJ_T0051842.1 MGP_LPJ_G0025127.1 mouse_genomes_project 19 45638392 45639650 + Pprc1 protein_coding processed_transcript MGP_LPJ_T0051843.1 MGP_LPJ_G0025127.1 mouse_genomes_project 19 45642302 45643350 + Pprc1 protein_coding retained_intron MGP_LPJ_T0051752.1 MGP_LPJ_G0025100.1 mouse_genomes_project 19 43927554 43951227 + MGP_LPJ_P0051752 Wnt8b protein_coding protein_coding MGP_LPJ_T0050230.1 MGP_LPJ_G0024566.1 mouse_genomes_project 19 942607 955585 - MGP_LPJ_P0050230 Aip protein_coding protein_coding MGP_LPJ_T0050231.1 MGP_LPJ_G0024566.1 mouse_genomes_project 19 942625 949734 - MGP_LPJ_P0050231 Aip protein_coding protein_coding MGP_LPJ_T0050232.1 MGP_LPJ_G0024566.1 mouse_genomes_project 19 943608 955575 - MGP_LPJ_P0050232 Aip protein_coding protein_coding MGP_LPJ_T0050233.1 MGP_LPJ_G0024566.1 mouse_genomes_project 19 946417 952723 - Aip protein_coding processed_transcript MGP_LPJ_T0050234.1 MGP_LPJ_G0024566.1 mouse_genomes_project 19 949091 955517 - Aip protein_coding retained_intron MGP_LPJ_T0098018.1 MGP_LPJ_G0036299.1 mouse_genomes_project 19 11501803 11502600 + pseudogene pseudogene MGP_LPJ_T0050945.1 MGP_LPJ_G0024779.1 mouse_genomes_project 19 8112808 8155035 - MGP_LPJ_P0050945 Cd6 protein_coding protein_coding MGP_LPJ_T0050946.1 MGP_LPJ_G0024779.1 mouse_genomes_project 19 8112813 8122212 - Cd6 protein_coding retained_intron MGP_LPJ_T0050947.1 MGP_LPJ_G0024779.1 mouse_genomes_project 19 8112816 8154941 - MGP_LPJ_P0050947 Cd6 protein_coding protein_coding MGP_LPJ_T0050948.1 MGP_LPJ_G0024779.1 mouse_genomes_project 19 8114453 8116456 - Cd6 protein_coding retained_intron MGP_LPJ_T0050949.1 MGP_LPJ_G0024779.1 mouse_genomes_project 19 8118031 8154833 - MGP_LPJ_P0050949 Cd6 protein_coding protein_coding MGP_LPJ_T0051113.1 MGP_LPJ_G0024855.1 mouse_genomes_project 19 10686159 10687065 - MGP_LPJ_P0051113 Olfr1458 protein_coding protein_coding MGP_LPJ_T0051898.1 MGP_LPJ_G0025146.1 mouse_genomes_project 19 46415910 46535007 + MGP_LPJ_P0051898 Cnnm2 protein_coding protein_coding MGP_LPJ_T0051899.1 MGP_LPJ_G0025146.1 mouse_genomes_project 19 46415910 46535007 + MGP_LPJ_P0051899 Cnnm2 protein_coding protein_coding MGP_LPJ_T0051418.1 MGP_LPJ_G0024981.1 mouse_genomes_project 19 32948629 32983960 - MGP_LPJ_P0051418 Ankrd22 protein_coding protein_coding MGP_LPJ_T0051419.1 MGP_LPJ_G0024981.1 mouse_genomes_project 19 32949005 32978405 - Ankrd22 protein_coding processed_transcript MGP_LPJ_T0051420.1 MGP_LPJ_G0024981.1 mouse_genomes_project 19 32949005 32955458 - Ankrd22 protein_coding processed_transcript MGP_LPJ_T0011491.1 MGP_LPJ_G0009609.1 mouse_genomes_project 19 14835501 14835762 - Gm27796 misc_RNA misc_RNA MGP_LPJ_T0099303.1 MGP_LPJ_G0037566.1 mouse_genomes_project 19 44418157 44418264 + Gm25482 snRNA snRNA MGP_LPJ_T0050895.1 MGP_LPJ_G0024755.1 mouse_genomes_project 19 7268317 7270707 + MGP_LPJ_P0050895 Fth1 protein_coding protein_coding MGP_LPJ_T0051069.1 MGP_LPJ_G0024826.1 mouse_genomes_project 19 9732404 9733343 - MGP_LPJ_P0051069 Olfr262 protein_coding protein_coding MGP_LPJ_T0003883.1 MGP_LPJ_G0003476.1 mouse_genomes_project 19 44235076 44245835 - Gm20395 antisense antisense MGP_LPJ_T0051380.1 MGP_LPJ_G0024964.1 mouse_genomes_project 19 30483994 30570105 + MGP_LPJ_P0051380 A1cf protein_coding protein_coding MGP_LPJ_T0051107.1 MGP_LPJ_G0024849.1 mouse_genomes_project 19 10518193 10519141 + MGP_LPJ_P0051107 Olfr1449 protein_coding protein_coding MGP_LPJ_T0052110.1 MGP_LPJ_G0025211.1 mouse_genomes_project 19 59154272 59224633 - MGP_LPJ_P0052110 Hspa12a protein_coding protein_coding MGP_LPJ_T0051353.1 MGP_LPJ_G0024955.1 mouse_genomes_project 19 28282336 28286911 - MGP_LPJ_P0051353 Ranbp6 protein_coding protein_coding MGP_LPJ_T0007092.1 MGP_LPJ_G0005827.1 mouse_genomes_project 19 27087343 27130745 + D930032P07Rik lincRNA lincRNA MGP_LPJ_T0007093.1 MGP_LPJ_G0005827.1 mouse_genomes_project 19 27087347 27130470 + D930032P07Rik lincRNA lincRNA MGP_LPJ_T0051554.1 MGP_LPJ_G0025036.1 mouse_genomes_project 19 39246438 39279818 - MGP_LPJ_P0051554 Cyp2c37 protein_coding protein_coding MGP_LPJ_T0050954.1 MGP_LPJ_G0024781.1 mouse_genomes_project 19 8183829 8195830 - MGP_LPJ_P0050954 Tmem132a protein_coding protein_coding MGP_LPJ_T0050955.1 MGP_LPJ_G0024781.1 mouse_genomes_project 19 8183841 8195668 - MGP_LPJ_P0050955 Tmem132a protein_coding protein_coding MGP_LPJ_T0051793.1 MGP_LPJ_G0025119.1 mouse_genomes_project 19 45104227 45191528 - MGP_LPJ_P0051793 Fbxw4 protein_coding protein_coding MGP_LPJ_T0051795.1 MGP_LPJ_G0025119.1 mouse_genomes_project 19 45104592 45120422 - MGP_LPJ_P0051795 Fbxw4 protein_coding protein_coding MGP_LPJ_T0051796.1 MGP_LPJ_G0025119.1 mouse_genomes_project 19 45104773 45118797 - MGP_LPJ_P0051796 Fbxw4 protein_coding protein_coding MGP_LPJ_T0051797.1 MGP_LPJ_G0025119.1 mouse_genomes_project 19 45104775 45105869 - Fbxw4 protein_coding retained_intron MGP_LPJ_T0051798.1 MGP_LPJ_G0025119.1 mouse_genomes_project 19 45104819 45118797 - MGP_LPJ_P0051798 Fbxw4 protein_coding protein_coding MGP_LPJ_T0051799.1 MGP_LPJ_G0025119.1 mouse_genomes_project 19 45104890 45119616 - MGP_LPJ_P0051799 Fbxw4 protein_coding protein_coding MGP_LPJ_T0051800.1 MGP_LPJ_G0025119.1 mouse_genomes_project 19 45105740 45159967 - Fbxw4 protein_coding retained_intron MGP_LPJ_T0051801.1 MGP_LPJ_G0025119.1 mouse_genomes_project 19 45118415 45159967 - Fbxw4 protein_coding retained_intron MGP_LPJ_T0051802.1 MGP_LPJ_G0025119.1 mouse_genomes_project 19 45159702 45169638 - MGP_LPJ_P0051802 Fbxw4 protein_coding protein_coding MGP_LPJ_T0051555.1 MGP_LPJ_G0025037.1 mouse_genomes_project 19 39302776 39327063 + MGP_LPJ_P0051555 Cyp2c50 protein_coding protein_coding MGP_LPJ_T0051556.1 MGP_LPJ_G0025037.1 mouse_genomes_project 19 39302789 39327063 + MGP_LPJ_P0051556 Cyp2c50 protein_coding protein_coding MGP_LPJ_T0051557.1 MGP_LPJ_G0025037.1 mouse_genomes_project 19 39302847 39310827 + Cyp2c50 protein_coding retained_intron MGP_LPJ_T0050993.1 MGP_LPJ_G0024793.1 mouse_genomes_project 19 8518150 8546558 - MGP_LPJ_P0050993 Ms4a13 protein_coding protein_coding MGP_LPJ_T0050994.1 MGP_LPJ_G0024793.1 mouse_genomes_project 19 8518151 8546572 - MGP_LPJ_P0050994 Ms4a13 protein_coding protein_coding MGP_LPJ_T0051586.1 MGP_LPJ_G0025043.1 mouse_genomes_project 19 39867970 39869747 + Entpd1 protein_coding processed_transcript MGP_LPJ_T0051587.1 MGP_LPJ_G0025043.1 mouse_genomes_project 19 39867993 39871320 + Entpd1 protein_coding processed_transcript MGP_LPJ_T0051588.1 MGP_LPJ_G0025043.1 mouse_genomes_project 19 39868001 40003040 + MGP_LPJ_P0051588 Entpd1 protein_coding protein_coding MGP_LPJ_T0051589.1 MGP_LPJ_G0025043.1 mouse_genomes_project 19 39915946 40004848 + MGP_LPJ_P0051589 Entpd1 protein_coding protein_coding MGP_LPJ_T0051590.1 MGP_LPJ_G0025043.1 mouse_genomes_project 19 39915975 39988274 + MGP_LPJ_P0051590 Entpd1 protein_coding protein_coding MGP_LPJ_T0051591.1 MGP_LPJ_G0025043.1 mouse_genomes_project 19 39916020 40002329 + MGP_LPJ_P0051591 Entpd1 protein_coding nonsense_mediated_decay MGP_LPJ_T0051592.1 MGP_LPJ_G0025043.1 mouse_genomes_project 19 39916375 39972448 + Entpd1 protein_coding processed_transcript MGP_LPJ_T0051593.1 MGP_LPJ_G0025043.1 mouse_genomes_project 19 39916669 39986357 + Entpd1 protein_coding processed_transcript MGP_LPJ_T0051594.1 MGP_LPJ_G0025043.1 mouse_genomes_project 19 39939816 39986453 + Entpd1 protein_coding processed_transcript MGP_LPJ_T0051595.1 MGP_LPJ_G0025043.1 mouse_genomes_project 19 39989297 40003001 + MGP_LPJ_P0051595 Entpd1 protein_coding protein_coding MGP_LPJ_T0051596.1 MGP_LPJ_G0025043.1 mouse_genomes_project 19 39999429 40000111 + Entpd1 protein_coding processed_transcript MGP_LPJ_T0050386.1 MGP_LPJ_G0024622.1 mouse_genomes_project 19 2332164 2336517 - MGP_LPJ_P0050386 Tsga10ip protein_coding protein_coding MGP_LPJ_T0051077.1 MGP_LPJ_G0024834.1 mouse_genomes_project 19 9998662 10042966 - MGP_LPJ_P0051077 Dtx4 protein_coding protein_coding MGP_LPJ_T0099300.1 MGP_LPJ_G0037563.1 mouse_genomes_project 19 36537607 36537713 + Gm23026 snRNA snRNA MGP_LPJ_T0051679.1 MGP_LPJ_G0025076.1 mouse_genomes_project 19 41916910 41935617 - MGP_LPJ_P0051679 Loxl4 protein_coding protein_coding MGP_LPJ_T0051680.1 MGP_LPJ_G0025076.1 mouse_genomes_project 19 41918034 41935617 - MGP_LPJ_P0051680 Loxl4 protein_coding protein_coding MGP_LPJ_T0051681.1 MGP_LPJ_G0025076.1 mouse_genomes_project 19 41918262 41931438 - MGP_LPJ_P0051681 Loxl4 protein_coding protein_coding MGP_LPJ_T0051682.1 MGP_LPJ_G0025076.1 mouse_genomes_project 19 41924481 41926260 - Loxl4 protein_coding processed_transcript MGP_LPJ_T0051683.1 MGP_LPJ_G0025076.1 mouse_genomes_project 19 41930536 41935576 - MGP_LPJ_P0051683 Loxl4 protein_coding protein_coding MGP_LPJ_T0013354.1 MGP_LPJ_G0011445.1 mouse_genomes_project 19 27156073 27156466 - processed_pseudogene processed_pseudogene MGP_LPJ_T0051083.1 MGP_LPJ_G0024837.1 mouse_genomes_project 19 10186331 10206223 + MGP_LPJ_P0051083 Glyat protein_coding protein_coding MGP_LPJ_T0051084.1 MGP_LPJ_G0024837.1 mouse_genomes_project 19 10186538 10201484 + Glyat protein_coding retained_intron MGP_LPJ_T0051085.1 MGP_LPJ_G0024837.1 mouse_genomes_project 19 10186538 10188131 + Glyat protein_coding processed_transcript MGP_LPJ_T0051086.1 MGP_LPJ_G0024837.1 mouse_genomes_project 19 10186556 10206885 + MGP_LPJ_P0051086 Glyat protein_coding protein_coding MGP_LPJ_T0051087.1 MGP_LPJ_G0024837.1 mouse_genomes_project 19 10192467 10203398 + Glyat protein_coding processed_transcript MGP_LPJ_T0051177.1 MGP_LPJ_G0024896.1 mouse_genomes_project 19 16521899 16557709 + MGP_LPJ_P0051177 Carnmt1 protein_coding protein_coding MGP_LPJ_T0011499.1 MGP_LPJ_G0009617.1 mouse_genomes_project 19 41026527 41026765 + Gm22601 misc_RNA misc_RNA MGP_LPJ_T0051928.1 MGP_LPJ_G0025160.1 mouse_genomes_project 19 47295746 47354977 + MGP_LPJ_P0051928 Slk protein_coding protein_coding MGP_LPJ_T0051929.1 MGP_LPJ_G0025160.1 mouse_genomes_project 19 47296087 47352186 + MGP_LPJ_P0051929 Slk protein_coding protein_coding MGP_LPJ_T0051930.1 MGP_LPJ_G0025160.1 mouse_genomes_project 19 47331041 47335702 + Slk protein_coding retained_intron MGP_LPJ_T0051931.1 MGP_LPJ_G0025160.1 mouse_genomes_project 19 47333029 47336202 + Slk protein_coding retained_intron MGP_LPJ_T0051932.1 MGP_LPJ_G0025160.1 mouse_genomes_project 19 47344860 47346185 + Slk protein_coding retained_intron MGP_LPJ_T0003868.1 MGP_LPJ_G0003466.1 mouse_genomes_project 19 4362714 4365953 + antisense antisense MGP_LPJ_T0050974.1 MGP_LPJ_G0024785.1 mouse_genomes_project 19 8273296 8278578 + MGP_LPJ_P0050974 Ptgdr2 protein_coding protein_coding MGP_LPJ_T0051613.1 MGP_LPJ_G0025053.1 mouse_genomes_project 19 40857685 40861852 + MGP_LPJ_P0051613 Gm340 protein_coding protein_coding MGP_LPJ_T0051123.1 MGP_LPJ_G0024865.1 mouse_genomes_project 19 11051324 11052228 - MGP_LPJ_P0051123 protein_coding protein_coding MGP_LPJ_T0011494.1 MGP_LPJ_G0009612.1 mouse_genomes_project 19 29261620 29261938 + Gm23426 misc_RNA misc_RNA MGP_LPJ_T0051916.1 MGP_LPJ_G0025158.1 mouse_genomes_project 19 46947008 47168339 - MGP_LPJ_P0051916 Sh3pxd2a protein_coding protein_coding MGP_LPJ_T0051917.1 MGP_LPJ_G0025158.1 mouse_genomes_project 19 46947008 47168339 - MGP_LPJ_P0051917 Sh3pxd2a protein_coding protein_coding MGP_LPJ_T0051494.1 MGP_LPJ_G0025008.1 mouse_genomes_project 19 36439133 36493460 + MGP_LPJ_P0051494 Kif11 protein_coding protein_coding MGP_LPJ_T0098373.1 MGP_LPJ_G0036654.1 mouse_genomes_project 19 36187768 36187846 - Gm22714 ribozyme ribozyme MGP_LPJ_T0050268.1 MGP_LPJ_G0024579.1 mouse_genomes_project 19 1125580 1139645 - MGP_LPJ_P0050268 Ankrd13d protein_coding protein_coding MGP_LPJ_T0050269.1 MGP_LPJ_G0024579.1 mouse_genomes_project 19 1125580 1138685 - MGP_LPJ_P0050269 Ankrd13d protein_coding protein_coding MGP_LPJ_T0050270.1 MGP_LPJ_G0024579.1 mouse_genomes_project 19 1125582 1139647 - MGP_LPJ_P0050270 Ankrd13d protein_coding nonsense_mediated_decay MGP_LPJ_T0050271.1 MGP_LPJ_G0024579.1 mouse_genomes_project 19 1125798 1126695 - MGP_LPJ_P0050271 Ankrd13d protein_coding nonsense_mediated_decay MGP_LPJ_T0050272.1 MGP_LPJ_G0024579.1 mouse_genomes_project 19 1128021 1137521 - MGP_LPJ_P0050272 Ankrd13d protein_coding nonsense_mediated_decay MGP_LPJ_T0050273.1 MGP_LPJ_G0024579.1 mouse_genomes_project 19 1135975 1139647 - Ankrd13d protein_coding processed_transcript MGP_LPJ_T0050274.1 MGP_LPJ_G0024579.1 mouse_genomes_project 19 1137155 1139543 - MGP_LPJ_P0050274 Ankrd13d protein_coding protein_coding MGP_LPJ_T0050950.1 MGP_LPJ_G0024780.1 mouse_genomes_project 19 8165680 8169341 + Slc15a3 protein_coding processed_transcript MGP_LPJ_T0050951.1 MGP_LPJ_G0024780.1 mouse_genomes_project 19 8168497 8183923 + MGP_LPJ_P0050951 Slc15a3 protein_coding protein_coding MGP_LPJ_T0050952.1 MGP_LPJ_G0024780.1 mouse_genomes_project 19 8168503 8169465 + Slc15a3 protein_coding processed_transcript MGP_LPJ_T0050953.1 MGP_LPJ_G0024780.1 mouse_genomes_project 19 8168888 8185370 + Slc15a3 protein_coding retained_intron MGP_LPJ_T0051568.1 MGP_LPJ_G0025040.1 mouse_genomes_project 19 39540278 39651656 - MGP_LPJ_P0051568 Sorbs1 protein_coding protein_coding MGP_LPJ_T0051569.1 MGP_LPJ_G0025040.1 mouse_genomes_project 19 39540278 39651656 - MGP_LPJ_P0051569 Sorbs1 protein_coding protein_coding MGP_LPJ_T0051570.1 MGP_LPJ_G0025040.1 mouse_genomes_project 19 39540278 39651656 - MGP_LPJ_P0051570 Sorbs1 protein_coding protein_coding MGP_LPJ_T0051571.1 MGP_LPJ_G0025040.1 mouse_genomes_project 19 39540278 39651656 - MGP_LPJ_P0051571 Sorbs1 protein_coding protein_coding MGP_LPJ_T0051572.1 MGP_LPJ_G0025040.1 mouse_genomes_project 19 39554715 39651656 - MGP_LPJ_P0051572 Sorbs1 protein_coding unknown_likely_coding MGP_LPJ_T0051573.1 MGP_LPJ_G0025040.1 mouse_genomes_project 19 39554715 39651656 - MGP_LPJ_P0051573 Sorbs1 protein_coding unknown_likely_coding MGP_LPJ_T0102001.1 MGP_LPJ_G0040038.1 mouse_genomes_project 19 32294668 32367613 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0051126.1 MGP_LPJ_G0024868.1 mouse_genomes_project 19 11123306 11124379 + MGP_LPJ_P0051126 protein_coding protein_coding MGP_LPJ_T0051360.1 MGP_LPJ_G0024958.1 mouse_genomes_project 19 28520669 28550397 + Uhrf2 protein_coding retained_intron MGP_LPJ_T0051361.1 MGP_LPJ_G0024958.1 mouse_genomes_project 19 28520669 28573178 + Uhrf2 protein_coding retained_intron MGP_LPJ_T0051362.1 MGP_LPJ_G0024958.1 mouse_genomes_project 19 28520669 28585336 + MGP_LPJ_P0051362 Uhrf2 protein_coding protein_coding MGP_LPJ_T0051363.1 MGP_LPJ_G0024958.1 mouse_genomes_project 19 28520745 28548748 + MGP_LPJ_P0051363 Uhrf2 protein_coding protein_coding MGP_LPJ_T0051364.1 MGP_LPJ_G0024958.1 mouse_genomes_project 19 28565364 28567099 + Uhrf2 protein_coding retained_intron MGP_LPJ_T0051365.1 MGP_LPJ_G0024958.1 mouse_genomes_project 19 28570162 28571904 + Uhrf2 protein_coding retained_intron MGP_LPJ_T0051366.1 MGP_LPJ_G0024958.1 mouse_genomes_project 19 28577271 28578936 + Uhrf2 protein_coding retained_intron MGP_LPJ_T0051367.1 MGP_LPJ_G0024958.1 mouse_genomes_project 19 28580675 28585336 + Uhrf2 protein_coding retained_intron MGP_LPJ_T0051368.1 MGP_LPJ_G0024958.1 mouse_genomes_project 19 28583572 28584551 + Uhrf2 protein_coding retained_intron MGP_LPJ_T0100549.1 MGP_LPJ_G0038812.1 mouse_genomes_project 19 34711491 34711624 - Gm25611 snoRNA snoRNA MGP_LPJ_T0051067.1 MGP_LPJ_G0024824.1 mouse_genomes_project 19 9590118 9591166 - MGP_LPJ_P0051067 Olfr76 protein_coding protein_coding MGP_LPJ_T0051058.1 MGP_LPJ_G0024815.1 mouse_genomes_project 19 9227904 9229969 - MGP_LPJ_P0051058 Olfr1417 protein_coding protein_coding MGP_LPJ_T0013344.1 MGP_LPJ_G0011435.1 mouse_genomes_project 19 9739174 9739330 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010335.1 MGP_LPJ_G0008453.1 mouse_genomes_project 19 45934031 45934140 + Mir146b miRNA miRNA MGP_LPJ_T0003887.1 MGP_LPJ_G0003480.1 mouse_genomes_project 19 47226029 47229626 + Gm19557 antisense antisense MGP_LPJ_T0050398.1 MGP_LPJ_G0024627.1 mouse_genomes_project 19 2409308 2413754 + MGP_LPJ_P0050398 Fibp protein_coding protein_coding MGP_LPJ_T0050399.1 MGP_LPJ_G0024627.1 mouse_genomes_project 19 2409395 2413759 + MGP_LPJ_P0050399 Fibp protein_coding unknown_likely_coding MGP_LPJ_T0050937.1 MGP_LPJ_G0024772.1 mouse_genomes_project 19 7890121 7901911 + MGP_LPJ_P0050937 Cyb561a3 protein_coding protein_coding MGP_LPJ_T0017622.1 MGP_LPJ_G0015292.1 mouse_genomes_project 19 2761125 2762113 + Gm20417 processed_transcript processed_transcript MGP_LPJ_T0050905.1 MGP_LPJ_G0024761.1 mouse_genomes_project 19 7499147 7504083 - MGP_LPJ_P0050905 Fen1 protein_coding protein_coding MGP_LPJ_T0050906.1 MGP_LPJ_G0024761.1 mouse_genomes_project 19 7499153 7503857 - MGP_LPJ_P0050906 Fen1 protein_coding protein_coding MGP_LPJ_T0050907.1 MGP_LPJ_G0024761.1 mouse_genomes_project 19 7499153 7503982 - MGP_LPJ_P0050907 Fen1 protein_coding protein_coding MGP_LPJ_T0050908.1 MGP_LPJ_G0024761.1 mouse_genomes_project 19 7499157 7503808 - MGP_LPJ_P0050908 Fen1 protein_coding protein_coding MGP_LPJ_T0017602.1 MGP_LPJ_G0015290.1 mouse_genomes_project 19 955660 962099 + Tmem134 processed_transcript processed_transcript MGP_LPJ_T0017603.1 MGP_LPJ_G0015290.1 mouse_genomes_project 19 955685 961541 + Tmem134 processed_transcript processed_transcript MGP_LPJ_T0017604.1 MGP_LPJ_G0015290.1 mouse_genomes_project 19 955685 961541 + Tmem134 processed_transcript processed_transcript MGP_LPJ_T0017605.1 MGP_LPJ_G0015290.1 mouse_genomes_project 19 955685 961541 + Tmem134 processed_transcript processed_transcript MGP_LPJ_T0017606.1 MGP_LPJ_G0015290.1 mouse_genomes_project 19 955685 961258 + Tmem134 processed_transcript processed_transcript MGP_LPJ_T0017607.1 MGP_LPJ_G0015290.1 mouse_genomes_project 19 955685 961540 + Tmem134 processed_transcript retained_intron MGP_LPJ_T0017608.1 MGP_LPJ_G0015290.1 mouse_genomes_project 19 955686 962121 + Tmem134 processed_transcript processed_transcript MGP_LPJ_T0017609.1 MGP_LPJ_G0015290.1 mouse_genomes_project 19 955686 962119 + Tmem134 processed_transcript processed_transcript MGP_LPJ_T0017610.1 MGP_LPJ_G0015290.1 mouse_genomes_project 19 955686 962099 + Tmem134 processed_transcript retained_intron MGP_LPJ_T0017611.1 MGP_LPJ_G0015290.1 mouse_genomes_project 19 955701 961541 + Tmem134 processed_transcript processed_transcript MGP_LPJ_T0017612.1 MGP_LPJ_G0015290.1 mouse_genomes_project 19 955705 961549 + Tmem134 processed_transcript processed_transcript MGP_LPJ_T0017613.1 MGP_LPJ_G0015290.1 mouse_genomes_project 19 955713 961544 + Tmem134 processed_transcript processed_transcript MGP_LPJ_T0017614.1 MGP_LPJ_G0015290.1 mouse_genomes_project 19 955715 961541 + Tmem134 processed_transcript processed_transcript MGP_LPJ_T0017615.1 MGP_LPJ_G0015290.1 mouse_genomes_project 19 955715 957465 + Tmem134 processed_transcript processed_transcript MGP_LPJ_T0017616.1 MGP_LPJ_G0015290.1 mouse_genomes_project 19 955755 961546 + Tmem134 processed_transcript processed_transcript MGP_LPJ_T0017617.1 MGP_LPJ_G0015290.1 mouse_genomes_project 19 957297 961071 + Tmem134 processed_transcript processed_transcript MGP_LPJ_T0051701.1 MGP_LPJ_G0025082.1 mouse_genomes_project 19 42989542 42993112 + MGP_LPJ_P0051701 Nkx2-3 protein_coding protein_coding MGP_LPJ_T0050453.1 MGP_LPJ_G0024641.1 mouse_genomes_project 19 2649497 2663221 + MGP_LPJ_P0050453 Map3k11 protein_coding protein_coding MGP_LPJ_T0017601.1 MGP_LPJ_G0015289.1 mouse_genomes_project 19 588610 650029 - Gm16066 processed_transcript processed_transcript MGP_LPJ_T0050770.1 MGP_LPJ_G0024717.1 mouse_genomes_project 19 4667515 4717731 - MGP_LPJ_P0050770 Slc22a19 protein_coding protein_coding MGP_LPJ_T0050771.1 MGP_LPJ_G0024717.1 mouse_genomes_project 19 4670448 4717700 - Slc22a19 protein_coding retained_intron MGP_LPJ_T0050772.1 MGP_LPJ_G0024717.1 mouse_genomes_project 19 4713079 4717731 - Slc22a19 protein_coding retained_intron MGP_LPJ_T0051609.1 MGP_LPJ_G0025050.1 mouse_genomes_project 19 40483415 40538914 - MGP_LPJ_P0051609 Tm9sf3 protein_coding protein_coding MGP_LPJ_T0098513.1 MGP_LPJ_G0036788.1 mouse_genomes_project 19 26985669 26988428 - 4933413C19Rik sense_intronic sense_intronic MGP_LPJ_T0051139.1 MGP_LPJ_G0024881.1 mouse_genomes_project 19 11550639 11551742 + MGP_LPJ_P0051139 Olfr1505 protein_coding protein_coding MGP_LPJ_T0051912.1 MGP_LPJ_G0025155.1 mouse_genomes_project 19 46825820 46831652 - MGP_LPJ_P0051912 Calhm3 protein_coding protein_coding MGP_LPJ_T0051770.1 MGP_LPJ_G0025106.1 mouse_genomes_project 19 44404264 44460118 + MGP_LPJ_P0051770 Fam178a protein_coding protein_coding MGP_LPJ_T0013352.1 MGP_LPJ_G0011443.1 mouse_genomes_project 19 22893252 22894223 - processed_pseudogene processed_pseudogene MGP_LPJ_T0050995.1 MGP_LPJ_G0024794.1 mouse_genomes_project 19 8558624 8568187 - MGP_LPJ_P0050995 Ms4a12 protein_coding protein_coding MGP_LPJ_T0051755.1 MGP_LPJ_G0025102.1 mouse_genomes_project 19 43980579 43989697 - MGP_LPJ_P0051755 Gm20538 protein_coding protein_coding MGP_LPJ_T0051252.1 MGP_LPJ_G0024931.1 mouse_genomes_project 19 23941339 23947608 + MGP_LPJ_P0051252 Dmrt2 protein_coding protein_coding MGP_LPJ_T0017624.1 MGP_LPJ_G0015294.1 mouse_genomes_project 19 3429148 3438391 - Gm14965 processed_transcript antisense MGP_LPJ_T0017625.1 MGP_LPJ_G0015294.1 mouse_genomes_project 19 3436594 3438391 - Gm14965 processed_transcript retained_intron MGP_LPJ_T0013345.1 MGP_LPJ_G0011436.1 mouse_genomes_project 19 10119021 10119613 - processed_pseudogene processed_pseudogene MGP_LPJ_T0003866.1 MGP_LPJ_G0003465.1 mouse_genomes_project 19 4272363 4281555 + Gm17227 antisense antisense MGP_LPJ_T0003867.1 MGP_LPJ_G0003465.1 mouse_genomes_project 19 4272439 4281377 + Gm17227 antisense antisense MGP_LPJ_T0051772.1 MGP_LPJ_G0025108.1 mouse_genomes_project 19 44481363 44482792 - MGP_LPJ_P0051772 Mrpl43 protein_coding protein_coding MGP_LPJ_T0051051.1 MGP_LPJ_G0024811.1 mouse_genomes_project 19 9088263 9105887 + MGP_LPJ_P0051051 Oosp3 protein_coding protein_coding MGP_LPJ_T0051052.1 MGP_LPJ_G0024811.1 mouse_genomes_project 19 9088286 9105903 + MGP_LPJ_P0051052 Oosp3 protein_coding protein_coding MGP_LPJ_T0051451.1 MGP_LPJ_G0024998.1 mouse_genomes_project 19 35054892 35064939 - MGP_LPJ_P0051451 Ankrd1 protein_coding protein_coding MGP_LPJ_T0099309.1 MGP_LPJ_G0037572.1 mouse_genomes_project 19 61638610 61638726 - Gm22365 snRNA snRNA MGP_LPJ_T0051063.1 MGP_LPJ_G0024820.1 mouse_genomes_project 19 9379304 9409037 + MGP_LPJ_P0051063 Osbp protein_coding protein_coding MGP_LPJ_T0050796.1 MGP_LPJ_G0024727.1 mouse_genomes_project 19 5901110 5901618 + MGP_LPJ_P0050796 1700092M07Rik protein_coding protein_coding MGP_LPJ_T0050797.1 MGP_LPJ_G0024727.1 mouse_genomes_project 19 5901154 5901617 + 1700092M07Rik protein_coding retained_intron MGP_LPJ_T0051512.1 MGP_LPJ_G0025019.1 mouse_genomes_project 19 37399685 37448813 + MGP_LPJ_P0051512 Lgi1 protein_coding protein_coding MGP_LPJ_T0051513.1 MGP_LPJ_G0025019.1 mouse_genomes_project 19 37399716 37445547 + MGP_LPJ_P0051513 Lgi1 protein_coding nonsense_mediated_decay MGP_LPJ_T0051514.1 MGP_LPJ_G0025019.1 mouse_genomes_project 19 37399726 37443408 + MGP_LPJ_P0051514 Lgi1 protein_coding protein_coding MGP_LPJ_T0051515.1 MGP_LPJ_G0025019.1 mouse_genomes_project 19 37399795 37443407 + MGP_LPJ_P0051515 Lgi1 protein_coding protein_coding MGP_LPJ_T0051516.1 MGP_LPJ_G0025019.1 mouse_genomes_project 19 37399809 37432830 + MGP_LPJ_P0051516 Lgi1 protein_coding nonsense_mediated_decay MGP_LPJ_T0051517.1 MGP_LPJ_G0025019.1 mouse_genomes_project 19 37399820 37443101 + MGP_LPJ_P0051517 Lgi1 protein_coding protein_coding MGP_LPJ_T0051518.1 MGP_LPJ_G0025019.1 mouse_genomes_project 19 37399904 37401033 + Lgi1 protein_coding retained_intron MGP_LPJ_T0051519.1 MGP_LPJ_G0025019.1 mouse_genomes_project 19 37399953 37404166 + Lgi1 protein_coding retained_intron MGP_LPJ_T0051520.1 MGP_LPJ_G0025019.1 mouse_genomes_project 19 37400528 37436124 + Lgi1 protein_coding retained_intron MGP_LPJ_T0050357.1 MGP_LPJ_G0024607.1 mouse_genomes_project 19 1969864 1976129 + MGP_LPJ_P0050357 Rin1 protein_coding protein_coding MGP_LPJ_T0050358.1 MGP_LPJ_G0024607.1 mouse_genomes_project 19 1969915 1976138 + MGP_LPJ_P0050358 Rin1 protein_coding unknown_likely_coding MGP_LPJ_T0007105.1 MGP_LPJ_G0005835.1 mouse_genomes_project 19 39843364 39848793 + Gm27042 lincRNA lincRNA MGP_LPJ_T0051121.1 MGP_LPJ_G0024863.1 mouse_genomes_project 19 10987765 10988695 + MGP_LPJ_P0051121 Olfr1469 protein_coding protein_coding MGP_LPJ_T0051954.1 MGP_LPJ_G0025168.1 mouse_genomes_project 19 49890259 49890871 - MGP_LPJ_P0051954 Rpl13a-ps1 protein_coding protein_coding MGP_LPJ_T0010344.1 MGP_LPJ_G0008462.1 mouse_genomes_project 19 59282849 59282936 - Mir3086 miRNA miRNA MGP_LPJ_T0051900.1 MGP_LPJ_G0025147.1 mouse_genomes_project 19 46543023 46630034 - MGP_LPJ_P0051900 Nt5c2 protein_coding protein_coding MGP_LPJ_T0051901.1 MGP_LPJ_G0025147.1 mouse_genomes_project 19 46543023 46622017 - MGP_LPJ_P0051901 Nt5c2 protein_coding protein_coding MGP_LPJ_T0051902.1 MGP_LPJ_G0025147.1 mouse_genomes_project 19 46544020 46680365 - MGP_LPJ_P0051902 Nt5c2 protein_coding protein_coding MGP_LPJ_T0051903.1 MGP_LPJ_G0025147.1 mouse_genomes_project 19 46547704 46555851 - MGP_LPJ_P0051903 Nt5c2 protein_coding nonsense_mediated_decay MGP_LPJ_T0050275.1 MGP_LPJ_G0024580.1 mouse_genomes_project 19 1144254 1169162 - MGP_LPJ_P0050275 Adrbk1 protein_coding protein_coding MGP_LPJ_T0050276.1 MGP_LPJ_G0024580.1 mouse_genomes_project 19 1144263 1168903 - MGP_LPJ_P0050276 Adrbk1 protein_coding protein_coding MGP_LPJ_T0050277.1 MGP_LPJ_G0024580.1 mouse_genomes_project 19 1144263 1168978 - MGP_LPJ_P0050277 Adrbk1 protein_coding nonsense_mediated_decay MGP_LPJ_T0050278.1 MGP_LPJ_G0024580.1 mouse_genomes_project 19 1144264 1169170 - MGP_LPJ_P0050278 Adrbk1 protein_coding protein_coding MGP_LPJ_T0050279.1 MGP_LPJ_G0024580.1 mouse_genomes_project 19 1146404 1149772 - Adrbk1 protein_coding retained_intron MGP_LPJ_T0050280.1 MGP_LPJ_G0024580.1 mouse_genomes_project 19 1148764 1149763 - MGP_LPJ_P0050280 Adrbk1 protein_coding protein_coding MGP_LPJ_T0050281.1 MGP_LPJ_G0024580.1 mouse_genomes_project 19 1148794 1150852 - MGP_LPJ_P0050281 Adrbk1 protein_coding protein_coding MGP_LPJ_T0050282.1 MGP_LPJ_G0024580.1 mouse_genomes_project 19 1150830 1152180 - Adrbk1 protein_coding retained_intron MGP_LPJ_T0050283.1 MGP_LPJ_G0024580.1 mouse_genomes_project 19 1151715 1168975 - Adrbk1 protein_coding retained_intron MGP_LPJ_T0050284.1 MGP_LPJ_G0024580.1 mouse_genomes_project 19 1152935 1168156 - MGP_LPJ_P0050284 Adrbk1 protein_coding protein_coding MGP_LPJ_T0017618.1 MGP_LPJ_G0015291.1 mouse_genomes_project 19 1319900 1329183 + A930001C03Rik processed_transcript processed_transcript MGP_LPJ_T0017619.1 MGP_LPJ_G0015291.1 mouse_genomes_project 19 1320456 1329040 + A930001C03Rik processed_transcript processed_transcript MGP_LPJ_T0017620.1 MGP_LPJ_G0015291.1 mouse_genomes_project 19 1324601 1328720 + A930001C03Rik processed_transcript processed_transcript MGP_LPJ_T0017621.1 MGP_LPJ_G0015291.1 mouse_genomes_project 19 1327669 1329189 + A930001C03Rik processed_transcript retained_intron MGP_LPJ_T0051877.1 MGP_LPJ_G0025137.1 mouse_genomes_project 19 45972140 45991960 - MGP_LPJ_P0051877 Actr1a protein_coding protein_coding MGP_LPJ_T0050259.1 MGP_LPJ_G0024574.1 mouse_genomes_project 19 1028395 1031658 + MGP_LPJ_P0050259 Ppp1ca protein_coding protein_coding MGP_LPJ_T0051101.1 MGP_LPJ_G0024843.1 mouse_genomes_project 19 10364617 10399532 + MGP_LPJ_P0051101 Lpxn protein_coding protein_coding MGP_LPJ_T0051874.1 MGP_LPJ_G0025136.1 mouse_genomes_project 19 45950018 45970534 + MGP_LPJ_P0051874 Mfsd13a protein_coding nonsense_mediated_decay MGP_LPJ_T0051875.1 MGP_LPJ_G0025136.1 mouse_genomes_project 19 45957635 45970544 + MGP_LPJ_P0051875 Mfsd13a protein_coding protein_coding MGP_LPJ_T0051876.1 MGP_LPJ_G0025136.1 mouse_genomes_project 19 45962007 45970534 + Mfsd13a protein_coding retained_intron MGP_LPJ_T0011489.1 MGP_LPJ_G0009607.1 mouse_genomes_project 19 5836055 5836384 - Gm22820 misc_RNA misc_RNA MGP_LPJ_T0099301.1 MGP_LPJ_G0037564.1 mouse_genomes_project 19 41272772 41272871 + Gm23113 snRNA snRNA MGP_LPJ_T0100543.1 MGP_LPJ_G0038806.1 mouse_genomes_project 19 20260598 20260696 - Gm22506 snoRNA snoRNA MGP_LPJ_T0017660.1 MGP_LPJ_G0015303.1 mouse_genomes_project 19 26374891 26376388 + Gm20407 processed_transcript processed_transcript MGP_LPJ_T0101512.1 MGP_LPJ_G0039642.1 mouse_genomes_project 19 38420055 38454139 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101513.1 MGP_LPJ_G0039642.1 mouse_genomes_project 19 38420085 38454096 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0101514.1 MGP_LPJ_G0039642.1 mouse_genomes_project 19 38450883 38454387 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0051674.1 MGP_LPJ_G0025075.1 mouse_genomes_project 19 41843612 41914075 + MGP_LPJ_P0051674 R3hcc1l protein_coding protein_coding MGP_LPJ_T0051675.1 MGP_LPJ_G0025075.1 mouse_genomes_project 19 41843651 41912748 + MGP_LPJ_P0051675 R3hcc1l protein_coding protein_coding MGP_LPJ_T0051676.1 MGP_LPJ_G0025075.1 mouse_genomes_project 19 41843675 41897305 + MGP_LPJ_P0051676 R3hcc1l protein_coding protein_coding MGP_LPJ_T0051677.1 MGP_LPJ_G0025075.1 mouse_genomes_project 19 41885359 41897872 + R3hcc1l protein_coding retained_intron MGP_LPJ_T0051678.1 MGP_LPJ_G0025075.1 mouse_genomes_project 19 41902908 41906504 + R3hcc1l protein_coding retained_intron MGP_LPJ_T0052061.1 MGP_LPJ_G0025199.1 mouse_genomes_project 19 57109237 57150345 + MGP_LPJ_P0052061 Vwa2 protein_coding protein_coding MGP_LPJ_T0010342.1 MGP_LPJ_G0008460.1 mouse_genomes_project 19 55331037 55331094 + Mir6715 miRNA miRNA MGP_LPJ_T0100545.1 MGP_LPJ_G0038808.1 mouse_genomes_project 19 23143851 23143983 - Gm23658 snoRNA snoRNA MGP_LPJ_T0050124.1 MGP_LPJ_G0024544.1 mouse_genomes_project 19 167015 171569 - MGP_LPJ_P0050124 Gal protein_coding protein_coding MGP_LPJ_T0013363.1 MGP_LPJ_G0011454.1 mouse_genomes_project 19 51687757 51689436 + processed_pseudogene processed_pseudogene MGP_LPJ_T0051236.1 MGP_LPJ_G0024923.1 mouse_genomes_project 19 22875107 22880514 + MGP_LPJ_P0051236 Tmem252 protein_coding protein_coding MGP_LPJ_T0010343.1 MGP_LPJ_G0008461.1 mouse_genomes_project 19 58362438 58362508 + Mir5623 miRNA miRNA MGP_LPJ_T0098386.1 MGP_LPJ_G0036667.1 mouse_genomes_project 19 2788463 2788519 - Gm27702 sRNA sRNA MGP_LPJ_T0051695.1 MGP_LPJ_G0025080.1 mouse_genomes_project 19 42807435 42868008 + MGP_LPJ_P0051695 Cnnm1 protein_coding protein_coding MGP_LPJ_T0051696.1 MGP_LPJ_G0025080.1 mouse_genomes_project 19 42807444 42867963 + MGP_LPJ_P0051696 Cnnm1 protein_coding unknown_likely_coding MGP_LPJ_T0051511.1 MGP_LPJ_G0025018.1 mouse_genomes_project 19 37307309 37347287 - MGP_LPJ_P0051511 Fra10ac1 protein_coding protein_coding MGP_LPJ_T0007075.1 MGP_LPJ_G0005813.1 mouse_genomes_project 19 3008189 3013996 + Gm10814 lincRNA lincRNA MGP_LPJ_T0050260.1 MGP_LPJ_G0024575.1 mouse_genomes_project 19 1031436 1037842 - MGP_LPJ_P0050260 Rad9a protein_coding protein_coding MGP_LPJ_T0051235.1 MGP_LPJ_G0024922.1 mouse_genomes_project 19 22660603 22661458 - MGP_LPJ_P0051235 Fam122a protein_coding protein_coding MGP_LPJ_T0051530.1 MGP_LPJ_G0025023.1 mouse_genomes_project 19 38007777 38096189 + MGP_LPJ_P0051530 Tbc1d12 protein_coding protein_coding MGP_LPJ_T0007127.1 MGP_LPJ_G0005851.1 mouse_genomes_project 19 58947820 58973185 + 1810007D17Rik lincRNA lincRNA MGP_LPJ_T0051708.1 MGP_LPJ_G0025085.1 mouse_genomes_project 19 43116702 43139640 - MGP_LPJ_P0051708 Cox15 protein_coding protein_coding MGP_LPJ_T0051709.1 MGP_LPJ_G0025085.1 mouse_genomes_project 19 43122607 43125880 - Cox15 protein_coding retained_intron MGP_LPJ_T0050919.1 MGP_LPJ_G0024764.1 mouse_genomes_project 19 7545178 7605345 - MGP_LPJ_P0050919 Dagla protein_coding protein_coding MGP_LPJ_T0050920.1 MGP_LPJ_G0024764.1 mouse_genomes_project 19 7545181 7605325 - MGP_LPJ_P0050920 Dagla protein_coding nonsense_mediated_decay MGP_LPJ_T0050921.1 MGP_LPJ_G0024764.1 mouse_genomes_project 19 7553243 7557797 - Dagla protein_coding processed_transcript MGP_LPJ_T0100542.1 MGP_LPJ_G0038805.1 mouse_genomes_project 19 17938955 17939087 - Gm22684 snoRNA snoRNA MGP_LPJ_T0099287.1 MGP_LPJ_G0037550.1 mouse_genomes_project 19 10224354 10224461 + Gm24521 snRNA snRNA MGP_LPJ_T0051472.1 MGP_LPJ_G0025003.1 mouse_genomes_project 19 35930301 35932366 - MGP_LPJ_P0051472 Fgfbp3 protein_coding protein_coding MGP_LPJ_T0051844.1 MGP_LPJ_G0025128.1 mouse_genomes_project 19 45648191 45659102 + MGP_LPJ_P0051844 Nolc1 protein_coding protein_coding MGP_LPJ_T0051845.1 MGP_LPJ_G0025128.1 mouse_genomes_project 19 45648358 45659111 + MGP_LPJ_P0051845 Nolc1 protein_coding unknown_likely_coding MGP_LPJ_T0051073.1 MGP_LPJ_G0024830.1 mouse_genomes_project 19 9928383 9929331 + MGP_LPJ_P0051073 Olfr1440 protein_coding protein_coding MGP_LPJ_T0051651.1 MGP_LPJ_G0025065.1 mouse_genomes_project 19 41349038 41355717 + Hoga1 protein_coding processed_transcript MGP_LPJ_T0051652.1 MGP_LPJ_G0025065.1 mouse_genomes_project 19 41349220 41374575 + MGP_LPJ_P0051652 Hoga1 protein_coding protein_coding MGP_LPJ_T0051653.1 MGP_LPJ_G0025065.1 mouse_genomes_project 19 41349279 41363597 + Hoga1 protein_coding retained_intron MGP_LPJ_T0051654.1 MGP_LPJ_G0025065.1 mouse_genomes_project 19 41349346 41374550 + MGP_LPJ_P0051654 Hoga1 protein_coding protein_coding MGP_LPJ_T0007100.1 MGP_LPJ_G0005831.1 mouse_genomes_project 19 33958830 33962878 - Gm5248 lincRNA lincRNA MGP_LPJ_T0050857.1 MGP_LPJ_G0024737.1 mouse_genomes_project 19 6023011 6026136 + MGP_LPJ_P0050857 Lrrn4cl protein_coding protein_coding MGP_LPJ_T0051908.1 MGP_LPJ_G0025152.1 mouse_genomes_project 19 46763700 46803905 + MGP_LPJ_P0051908 Pdcd11 protein_coding protein_coding MGP_LPJ_T0050486.1 MGP_LPJ_G0024653.1 mouse_genomes_project 19 2915637 2955422 - MGP_LPJ_P0050486 Pola2 protein_coding protein_coding MGP_LPJ_T0050487.1 MGP_LPJ_G0024653.1 mouse_genomes_project 19 2916199 2955422 - MGP_LPJ_P0050487 Pola2 protein_coding protein_coding MGP_LPJ_T0051550.1 MGP_LPJ_G0025034.1 mouse_genomes_project 19 39036661 39092316 - MGP_LPJ_P0051550 protein_coding protein_coding MGP_LPJ_T0050377.1 MGP_LPJ_G0024614.1 mouse_genomes_project 19 2059256 2203095 - MGP_LPJ_P0050377 Pacs1 protein_coding protein_coding MGP_LPJ_T0051454.1 MGP_LPJ_G0025000.1 mouse_genomes_project 19 35525279 35561760 + Hectd2 protein_coding retained_intron MGP_LPJ_T0051455.1 MGP_LPJ_G0025000.1 mouse_genomes_project 19 35525279 35593468 + MGP_LPJ_P0051455 Hectd2 protein_coding protein_coding MGP_LPJ_T0051456.1 MGP_LPJ_G0025000.1 mouse_genomes_project 19 35525279 35593465 + MGP_LPJ_P0051456 Hectd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0051457.1 MGP_LPJ_G0025000.1 mouse_genomes_project 19 35525279 35592634 + MGP_LPJ_P0051457 Hectd2 protein_coding protein_coding MGP_LPJ_T0051458.1 MGP_LPJ_G0025000.1 mouse_genomes_project 19 35525327 35540288 + Hectd2 protein_coding retained_intron MGP_LPJ_T0051459.1 MGP_LPJ_G0025000.1 mouse_genomes_project 19 35525358 35591236 + MGP_LPJ_P0051459 Hectd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0051460.1 MGP_LPJ_G0025000.1 mouse_genomes_project 19 35557978 35591236 + MGP_LPJ_P0051460 Hectd2 protein_coding nonsense_mediated_decay MGP_LPJ_T0051461.1 MGP_LPJ_G0025000.1 mouse_genomes_project 19 35575764 35582996 + Hectd2 protein_coding retained_intron MGP_LPJ_T0050455.1 MGP_LPJ_G0024643.1 mouse_genomes_project 19 2667734 2687192 - MGP_LPJ_P0050455 Ehbp1l1 protein_coding protein_coding MGP_LPJ_T0050456.1 MGP_LPJ_G0024643.1 mouse_genomes_project 19 2667734 2687192 - MGP_LPJ_P0050456 Ehbp1l1 protein_coding protein_coding MGP_LPJ_T0003873.1 MGP_LPJ_G0003470.1 mouse_genomes_project 19 20474635 20484739 - Gm27151 antisense antisense MGP_LPJ_T0003874.1 MGP_LPJ_G0003470.1 mouse_genomes_project 19 20474665 20485462 - Gm27151 antisense antisense MGP_LPJ_T0003852.1 MGP_LPJ_G0003457.1 mouse_genomes_project 19 819732 820207 - Gm16312 antisense antisense MGP_LPJ_T0051437.1 MGP_LPJ_G0024991.1 mouse_genomes_project 19 33495636 33509775 - MGP_LPJ_P0051437 Ifit1bl2 protein_coding protein_coding MGP_LPJ_T0051438.1 MGP_LPJ_G0024991.1 mouse_genomes_project 19 33495638 33523940 - MGP_LPJ_P0051438 Ifit1bl2 protein_coding protein_coding MGP_LPJ_T0100539.1 MGP_LPJ_G0038802.1 mouse_genomes_project 19 9340306 9340440 - Gm22272 snoRNA snoRNA MGP_LPJ_T0051703.1 MGP_LPJ_G0025084.1 mouse_genomes_project 19 43067967 43117146 + MGP_LPJ_P0051703 Entpd7 protein_coding protein_coding MGP_LPJ_T0051704.1 MGP_LPJ_G0025084.1 mouse_genomes_project 19 43068104 43071840 + Entpd7 protein_coding retained_intron MGP_LPJ_T0051705.1 MGP_LPJ_G0025084.1 mouse_genomes_project 19 43068135 43106151 + Entpd7 protein_coding retained_intron MGP_LPJ_T0051706.1 MGP_LPJ_G0025084.1 mouse_genomes_project 19 43093800 43098609 + Entpd7 protein_coding retained_intron MGP_LPJ_T0051707.1 MGP_LPJ_G0025084.1 mouse_genomes_project 19 43109902 43111669 + Entpd7 protein_coding retained_intron MGP_LPJ_T0001047.1 MGP_LPJ_G0000972.1 mouse_genomes_project 19 2765504 2765988 + TEC TEC MGP_LPJ_T0051990.1 MGP_LPJ_G0025181.1 mouse_genomes_project 19 54013513 54110065 + MGP_LPJ_P0051990 Shoc2 protein_coding protein_coding MGP_LPJ_T0051991.1 MGP_LPJ_G0025181.1 mouse_genomes_project 19 54014823 54110065 + MGP_LPJ_P0051991 Shoc2 protein_coding protein_coding MGP_LPJ_T0099308.1 MGP_LPJ_G0037571.1 mouse_genomes_project 19 61638549 61638726 - Gm23102 snRNA snRNA MGP_LPJ_T0051214.1 MGP_LPJ_G0024910.1 mouse_genomes_project 19 20158705 21033655 + MGP_LPJ_P0051214 Trpm3 protein_coding protein_coding MGP_LPJ_T0051215.1 MGP_LPJ_G0024910.1 mouse_genomes_project 19 20158705 21033655 + MGP_LPJ_P0051215 Trpm3 protein_coding protein_coding MGP_LPJ_T0051216.1 MGP_LPJ_G0024910.1 mouse_genomes_project 19 20158705 21033655 + MGP_LPJ_P0051216 Trpm3 protein_coding protein_coding MGP_LPJ_T0051217.1 MGP_LPJ_G0024910.1 mouse_genomes_project 19 20484879 21033657 + MGP_LPJ_P0051217 Trpm3 protein_coding protein_coding MGP_LPJ_T0051218.1 MGP_LPJ_G0024910.1 mouse_genomes_project 19 20730067 20806545 + MGP_LPJ_P0051218 Trpm3 protein_coding protein_coding MGP_LPJ_T0051219.1 MGP_LPJ_G0024910.1 mouse_genomes_project 19 20730067 20967056 + MGP_LPJ_P0051219 Trpm3 protein_coding protein_coding MGP_LPJ_T0013339.1 MGP_LPJ_G0011430.1 mouse_genomes_project 19 4710343 4711511 - processed_pseudogene processed_pseudogene MGP_LPJ_T0050311.1 MGP_LPJ_G0024588.1 mouse_genomes_project 19 1521654 1595056 - MGP_LPJ_P0050311 Gm960 protein_coding unknown_likely_coding MGP_LPJ_T0050312.1 MGP_LPJ_G0024588.1 mouse_genomes_project 19 1521674 1595518 - MGP_LPJ_P0050312 Gm960 protein_coding protein_coding MGP_LPJ_T0050313.1 MGP_LPJ_G0024588.1 mouse_genomes_project 19 1545121 1595165 - MGP_LPJ_P0050313 Gm960 protein_coding protein_coding MGP_LPJ_T0100547.1 MGP_LPJ_G0038810.1 mouse_genomes_project 19 26072694 26072826 - Gm24782 snoRNA snoRNA MGP_LPJ_T0050939.1 MGP_LPJ_G0024774.1 mouse_genomes_project 19 7918987 7943174 + MGP_LPJ_P0050939 Ddb1 protein_coding protein_coding MGP_LPJ_T0052034.1 MGP_LPJ_G0025191.1 mouse_genomes_project 19 56521277 56600036 - MGP_LPJ_P0052034 Nrap protein_coding protein_coding MGP_LPJ_T0052035.1 MGP_LPJ_G0025191.1 mouse_genomes_project 19 56521283 56600062 - MGP_LPJ_P0052035 Nrap protein_coding protein_coding MGP_LPJ_T0052036.1 MGP_LPJ_G0025191.1 mouse_genomes_project 19 56521428 56590178 - MGP_LPJ_P0052036 Nrap protein_coding nonsense_mediated_decay MGP_LPJ_T0052037.1 MGP_LPJ_G0025191.1 mouse_genomes_project 19 56521431 56599902 - MGP_LPJ_P0052037 Nrap protein_coding protein_coding MGP_LPJ_T0052038.1 MGP_LPJ_G0025191.1 mouse_genomes_project 19 56521431 56599902 - MGP_LPJ_P0052038 Nrap protein_coding protein_coding MGP_LPJ_T0003870.1 MGP_LPJ_G0003468.1 mouse_genomes_project 19 8901246 8901989 - Gm19261 antisense antisense MGP_LPJ_T0051105.1 MGP_LPJ_G0024847.1 mouse_genomes_project 19 10479931 10481034 - MGP_LPJ_P0051105 Olfr1447 protein_coding protein_coding MGP_LPJ_T0051959.1 MGP_LPJ_G0025170.1 mouse_genomes_project 19 52167682 52168814 + MGP_LPJ_P0051959 Ins1 protein_coding protein_coding MGP_LPJ_T0051625.1 MGP_LPJ_G0025058.1 mouse_genomes_project 19 41153601 41186985 - MGP_LPJ_P0051625 Rrp12 protein_coding protein_coding MGP_LPJ_T0051081.1 MGP_LPJ_G0024836.1 mouse_genomes_project 19 10151502 10179897 + MGP_LPJ_P0051081 Gm4952 protein_coding protein_coding MGP_LPJ_T0051082.1 MGP_LPJ_G0024836.1 mouse_genomes_project 19 10151544 10181275 + MGP_LPJ_P0051082 Gm4952 protein_coding protein_coding MGP_LPJ_T0050354.1 MGP_LPJ_G0024604.1 mouse_genomes_project 19 1942315 1950279 + MGP_LPJ_P0050354 Slc29a2 protein_coding protein_coding MGP_LPJ_T0051428.1 MGP_LPJ_G0024985.1 mouse_genomes_project 19 33302197 33303547 - MGP_LPJ_P0051428 Ch25h protein_coding protein_coding MGP_LPJ_T0051059.1 MGP_LPJ_G0024816.1 mouse_genomes_project 19 9259869 9261694 - MGP_LPJ_P0051059 Olfr1418 protein_coding protein_coding MGP_LPJ_T0050723.1 MGP_LPJ_G0024706.1 mouse_genomes_project 19 4185880 4189664 - MGP_LPJ_P0050723 Cox8a protein_coding protein_coding MGP_LPJ_T0051400.1 MGP_LPJ_G0024970.1 mouse_genomes_project 19 31419113 31491656 + MGP_LPJ_P0051400 Pten protein_coding protein_coding MGP_LPJ_T0051401.1 MGP_LPJ_G0024970.1 mouse_genomes_project 19 31419211 31465555 + Pten protein_coding retained_intron MGP_LPJ_T0051402.1 MGP_LPJ_G0024970.1 mouse_genomes_project 19 31473936 31480688 + Pten protein_coding retained_intron MGP_LPJ_T0050697.1 MGP_LPJ_G0024693.1 mouse_genomes_project 19 3894153 3905338 + MGP_LPJ_P0050697 Bad protein_coding protein_coding MGP_LPJ_T0050698.1 MGP_LPJ_G0024693.1 mouse_genomes_project 19 3894615 3905332 + MGP_LPJ_P0050698 Bad protein_coding protein_coding MGP_LPJ_T0050699.1 MGP_LPJ_G0024693.1 mouse_genomes_project 19 3894793 3905333 + MGP_LPJ_P0050699 Bad protein_coding protein_coding MGP_LPJ_T0050700.1 MGP_LPJ_G0024693.1 mouse_genomes_project 19 3895171 3904692 + MGP_LPJ_P0050700 Bad protein_coding protein_coding MGP_LPJ_T0050701.1 MGP_LPJ_G0024693.1 mouse_genomes_project 19 3904206 3905314 + MGP_LPJ_P0050701 Bad protein_coding protein_coding MGP_LPJ_T0050865.1 MGP_LPJ_G0024742.1 mouse_genomes_project 19 6068221 6070659 + protein_coding retained_intron MGP_LPJ_T0050866.1 MGP_LPJ_G0024742.1 mouse_genomes_project 19 6068231 6070935 + protein_coding retained_intron MGP_LPJ_T0100544.1 MGP_LPJ_G0038807.1 mouse_genomes_project 19 21758251 21758353 + Gm22144 snoRNA snoRNA MGP_LPJ_T0050356.1 MGP_LPJ_G0024606.1 mouse_genomes_project 19 1959747 1968974 + MGP_LPJ_P0050356 Brms1 protein_coding protein_coding MGP_LPJ_T0051505.1 MGP_LPJ_G0025015.1 mouse_genomes_project 19 37213695 37232474 + MGP_LPJ_P0051505 Ffar4 protein_coding protein_coding MGP_LPJ_T0051788.1 MGP_LPJ_G0025116.1 mouse_genomes_project 19 44877455 45054320 + MGP_LPJ_P0051788 Btrc protein_coding protein_coding MGP_LPJ_T0051789.1 MGP_LPJ_G0025116.1 mouse_genomes_project 19 44877455 45054320 + MGP_LPJ_P0051789 Btrc protein_coding protein_coding MGP_LPJ_T0051790.1 MGP_LPJ_G0025116.1 mouse_genomes_project 19 44877560 45053004 + MGP_LPJ_P0051790 Btrc protein_coding unknown_likely_coding MGP_LPJ_T0051978.1 MGP_LPJ_G0025176.1 mouse_genomes_project 19 53544563 53558974 + MGP_LPJ_P0051978 Dusp5 protein_coding protein_coding MGP_LPJ_T0010307.1 MGP_LPJ_G0008425.1 mouse_genomes_project 19 4406821 4406891 + Mir6991 miRNA miRNA MGP_LPJ_T0050657.1 MGP_LPJ_G0024683.1 mouse_genomes_project 19 3438515 3561480 + MGP_LPJ_P0050657 Nrxn2 protein_coding protein_coding MGP_LPJ_T0050658.1 MGP_LPJ_G0024683.1 mouse_genomes_project 19 3438522 3494963 + Nrxn2 protein_coding retained_intron MGP_LPJ_T0050659.1 MGP_LPJ_G0024683.1 mouse_genomes_project 19 3438522 3561479 + MGP_LPJ_P0050659 Nrxn2 protein_coding protein_coding MGP_LPJ_T0050660.1 MGP_LPJ_G0024683.1 mouse_genomes_project 19 3438549 3560541 + MGP_LPJ_P0050660 Nrxn2 protein_coding protein_coding MGP_LPJ_T0050661.1 MGP_LPJ_G0024683.1 mouse_genomes_project 19 3453158 3561480 + MGP_LPJ_P0050661 Nrxn2 protein_coding protein_coding MGP_LPJ_T0050662.1 MGP_LPJ_G0024683.1 mouse_genomes_project 19 3453867 3500602 + MGP_LPJ_P0050662 Nrxn2 protein_coding protein_coding MGP_LPJ_T0050663.1 MGP_LPJ_G0024683.1 mouse_genomes_project 19 3453988 3501561 + MGP_LPJ_P0050663 Nrxn2 protein_coding protein_coding MGP_LPJ_T0050664.1 MGP_LPJ_G0024683.1 mouse_genomes_project 19 3471893 3501575 + Nrxn2 protein_coding processed_transcript MGP_LPJ_T0050665.1 MGP_LPJ_G0024683.1 mouse_genomes_project 19 3472731 3501673 + Nrxn2 protein_coding processed_transcript MGP_LPJ_T0050666.1 MGP_LPJ_G0024683.1 mouse_genomes_project 19 3481139 3511828 + Nrxn2 protein_coding retained_intron MGP_LPJ_T0050667.1 MGP_LPJ_G0024683.1 mouse_genomes_project 19 3501330 3511827 + Nrxn2 protein_coding retained_intron MGP_LPJ_T0050668.1 MGP_LPJ_G0024683.1 mouse_genomes_project 19 3526284 3538128 + Nrxn2 protein_coding processed_transcript MGP_LPJ_T0050669.1 MGP_LPJ_G0024683.1 mouse_genomes_project 19 3526441 3561480 + MGP_LPJ_P0050669 Nrxn2 protein_coding protein_coding MGP_LPJ_T0050670.1 MGP_LPJ_G0024683.1 mouse_genomes_project 19 3526448 3572363 + MGP_LPJ_P0050670 Nrxn2 protein_coding protein_coding MGP_LPJ_T0050671.1 MGP_LPJ_G0024683.1 mouse_genomes_project 19 3545467 3560559 + Nrxn2 protein_coding processed_transcript MGP_LPJ_T0051960.1 MGP_LPJ_G0025171.1 mouse_genomes_project 19 52909039 53004587 - MGP_LPJ_P0051960 Xpnpep1 protein_coding protein_coding MGP_LPJ_T0051961.1 MGP_LPJ_G0025171.1 mouse_genomes_project 19 52913687 53004675 - MGP_LPJ_P0051961 Xpnpep1 protein_coding nonsense_mediated_decay MGP_LPJ_T0051962.1 MGP_LPJ_G0025171.1 mouse_genomes_project 19 52955738 52985507 - Xpnpep1 protein_coding processed_transcript MGP_LPJ_T0051963.1 MGP_LPJ_G0025171.1 mouse_genomes_project 19 52955739 53006848 - MGP_LPJ_P0051963 Xpnpep1 protein_coding protein_coding MGP_LPJ_T0051964.1 MGP_LPJ_G0025171.1 mouse_genomes_project 19 52959960 52961230 - Xpnpep1 protein_coding retained_intron MGP_LPJ_T0051965.1 MGP_LPJ_G0025171.1 mouse_genomes_project 19 52972524 52979962 - Xpnpep1 protein_coding processed_transcript MGP_LPJ_T0051966.1 MGP_LPJ_G0025171.1 mouse_genomes_project 19 52974688 52985342 - Xpnpep1 protein_coding processed_transcript MGP_LPJ_T0051967.1 MGP_LPJ_G0025171.1 mouse_genomes_project 19 52976803 52978226 - Xpnpep1 protein_coding retained_intron MGP_LPJ_T0051968.1 MGP_LPJ_G0025171.1 mouse_genomes_project 19 52976832 53004594 - MGP_LPJ_P0051968 Xpnpep1 protein_coding protein_coding MGP_LPJ_T0051969.1 MGP_LPJ_G0025171.1 mouse_genomes_project 19 52982636 52997355 - Xpnpep1 protein_coding processed_transcript MGP_LPJ_T0051970.1 MGP_LPJ_G0025171.1 mouse_genomes_project 19 52998527 53004598 - Xpnpep1 protein_coding processed_transcript MGP_LPJ_T0050569.1 MGP_LPJ_G0024675.1 mouse_genomes_project 19 3255125 3276935 + MGP_LPJ_P0050569 Atg2a protein_coding protein_coding MGP_LPJ_T0050570.1 MGP_LPJ_G0024675.1 mouse_genomes_project 19 3258922 3276895 + MGP_LPJ_P0050570 Atg2a protein_coding protein_coding MGP_LPJ_T0050571.1 MGP_LPJ_G0024675.1 mouse_genomes_project 19 3264521 3266895 + Atg2a protein_coding retained_intron MGP_LPJ_T0050572.1 MGP_LPJ_G0024675.1 mouse_genomes_project 19 3270970 3274219 + Atg2a protein_coding retained_intron MGP_LPJ_T0050573.1 MGP_LPJ_G0024675.1 mouse_genomes_project 19 3272940 3274732 + Atg2a protein_coding retained_intron MGP_LPJ_T0051273.1 MGP_LPJ_G0024933.1 mouse_genomes_project 19 25209940 25212648 + MGP_LPJ_P0051273 Gm815 protein_coding protein_coding MGP_LPJ_T0051371.1 MGP_LPJ_G0024961.1 mouse_genomes_project 19 29105252 29109054 - MGP_LPJ_P0051371 Dkk1 protein_coding protein_coding MGP_LPJ_T0051542.1 MGP_LPJ_G0025028.1 mouse_genomes_project 19 38452658 38510503 + MGP_LPJ_P0051542 Cyp2c29 protein_coding protein_coding MGP_LPJ_T0051543.1 MGP_LPJ_G0025028.1 mouse_genomes_project 19 38462241 38510554 + MGP_LPJ_P0051543 Cyp2c29 protein_coding protein_coding MGP_LPJ_T0051544.1 MGP_LPJ_G0025028.1 mouse_genomes_project 19 38462241 38510568 + MGP_LPJ_P0051544 Cyp2c29 protein_coding nonsense_mediated_decay MGP_LPJ_T0100531.1 MGP_LPJ_G0038794.1 mouse_genomes_project 19 5884690 5884762 + Gm24452 snoRNA snoRNA MGP_LPJ_T0051124.1 MGP_LPJ_G0024866.1 mouse_genomes_project 19 11066574 11067482 - MGP_LPJ_P0051124 protein_coding protein_coding MGP_LPJ_T0051410.1 MGP_LPJ_G0024976.1 mouse_genomes_project 19 32355489 32369054 - MGP_LPJ_P0051410 Lipo1 protein_coding protein_coding MGP_LPJ_T0051411.1 MGP_LPJ_G0024976.1 mouse_genomes_project 19 32356516 32367603 - MGP_LPJ_P0051411 Lipo1 protein_coding protein_coding MGP_LPJ_T0050776.1 MGP_LPJ_G0024720.1 mouse_genomes_project 19 4892720 4986966 - MGP_LPJ_P0050776 protein_coding protein_coding MGP_LPJ_T0050777.1 MGP_LPJ_G0024720.1 mouse_genomes_project 19 4892720 4986966 - MGP_LPJ_P0050777 protein_coding protein_coding MGP_LPJ_T0013351.1 MGP_LPJ_G0011442.1 mouse_genomes_project 19 21783551 21784516 + processed_pseudogene processed_pseudogene MGP_LPJ_T0052111.1 MGP_LPJ_G0025212.1 mouse_genomes_project 19 59317085 59349930 + MGP_LPJ_P0052111 Eno4 protein_coding protein_coding MGP_LPJ_T0052112.1 MGP_LPJ_G0025212.1 mouse_genomes_project 19 59317085 59349932 + MGP_LPJ_P0052112 Eno4 protein_coding protein_coding MGP_LPJ_T0052113.1 MGP_LPJ_G0025212.1 mouse_genomes_project 19 59327804 59349928 + MGP_LPJ_P0052113 Eno4 protein_coding protein_coding MGP_LPJ_T0052114.1 MGP_LPJ_G0025212.1 mouse_genomes_project 19 59330083 59349444 + MGP_LPJ_P0052114 Eno4 protein_coding nonsense_mediated_decay MGP_LPJ_T0098019.1 MGP_LPJ_G0036300.1 mouse_genomes_project 19 14543767 14544324 + pseudogene pseudogene MGP_LPJ_T0050503.1 MGP_LPJ_G0024660.1 mouse_genomes_project 19 3068628 3069909 + MGP_LPJ_P0050503 Znhit2 protein_coding protein_coding MGP_LPJ_T0050335.1 MGP_LPJ_G0024597.1 mouse_genomes_project 19 1771914 1774250 - Actn3 protein_coding processed_transcript MGP_LPJ_T0050336.1 MGP_LPJ_G0024597.1 mouse_genomes_project 19 1771914 1790069 - MGP_LPJ_P0050336 Actn3 protein_coding protein_coding MGP_LPJ_T0051710.1 MGP_LPJ_G0025086.1 mouse_genomes_project 19 43139635 43155767 + MGP_LPJ_P0051710 Cutc protein_coding protein_coding MGP_LPJ_T0051711.1 MGP_LPJ_G0025086.1 mouse_genomes_project 19 43139737 43155774 + MGP_LPJ_P0051711 Cutc protein_coding protein_coding MGP_LPJ_T0051712.1 MGP_LPJ_G0025086.1 mouse_genomes_project 19 43139776 43155374 + MGP_LPJ_P0051712 Cutc protein_coding protein_coding MGP_LPJ_T0051713.1 MGP_LPJ_G0025086.1 mouse_genomes_project 19 43152008 43155774 + Cutc protein_coding retained_intron MGP_LPJ_T0051110.1 MGP_LPJ_G0024852.1 mouse_genomes_project 19 10613676 10614600 - MGP_LPJ_P0051110 Olfr1453 protein_coding protein_coding MGP_LPJ_T0100540.1 MGP_LPJ_G0038803.1 mouse_genomes_project 19 11234832 11234964 - Gm24124 snoRNA snoRNA MGP_LPJ_T0052004.1 MGP_LPJ_G0025188.1 mouse_genomes_project 19 55459387 55778735 + MGP_LPJ_P0052004 Vti1a protein_coding protein_coding MGP_LPJ_T0052005.1 MGP_LPJ_G0025188.1 mouse_genomes_project 19 55459487 55776088 + MGP_LPJ_P0052005 Vti1a protein_coding unknown_likely_coding MGP_LPJ_T0051440.1 MGP_LPJ_G0024993.1 mouse_genomes_project 19 33551540 33633612 - MGP_LPJ_P0051440 Slc16a12 protein_coding protein_coding MGP_LPJ_T0007065.1 MGP_LPJ_G0005809.1 mouse_genomes_project 19 1001394 1006113 + Gm17552 lincRNA lincRNA MGP_LPJ_T0052118.1 MGP_LPJ_G0025215.1 mouse_genomes_project 19 59609321 59623966 + MGP_LPJ_P0052118 Kcnk18 protein_coding protein_coding MGP_LPJ_T0017659.1 MGP_LPJ_G0015302.1 mouse_genomes_project 19 25091936 25148027 - 4931403E22Rik processed_transcript processed_transcript MGP_LPJ_T0051229.1 MGP_LPJ_G0024919.1 mouse_genomes_project 19 22242785 22324871 - MGP_LPJ_P0051229 Tjp2 protein_coding protein_coding MGP_LPJ_T0017656.1 MGP_LPJ_G0015300.1 mouse_genomes_project 19 10137426 10148095 - A330040F15Rik processed_transcript processed_transcript MGP_LPJ_T0050709.1 MGP_LPJ_G0024698.1 mouse_genomes_project 19 3945878 3950275 - MGP_LPJ_P0050709 Dnajc4 protein_coding protein_coding MGP_LPJ_T0051496.1 MGP_LPJ_G0025010.1 mouse_genomes_project 19 36636848 36779436 + MGP_LPJ_P0051496 Exoc6 protein_coding protein_coding MGP_LPJ_T0052106.1 MGP_LPJ_G0025208.1 mouse_genomes_project 19 59080020 59095240 + MGP_LPJ_P0052106 Pnliprp1 protein_coding protein_coding MGP_LPJ_T0051886.1 MGP_LPJ_G0025141.1 mouse_genomes_project 19 46199790 46225332 + MGP_LPJ_P0051886 Sfxn2 protein_coding protein_coding MGP_LPJ_T0050846.1 MGP_LPJ_G0024735.1 mouse_genomes_project 19 6008244 6010566 - MGP_LPJ_P0050846 Gng3 protein_coding protein_coding MGP_LPJ_T0050872.1 MGP_LPJ_G0024745.1 mouse_genomes_project 19 6110839 6112814 - MGP_LPJ_P0050872 Rom1 protein_coding protein_coding MGP_LPJ_T0051192.1 MGP_LPJ_G0024901.1 mouse_genomes_project 19 18550712 18594122 + MGP_LPJ_P0051192 Aldh1a1 protein_coding protein_coding MGP_LPJ_T0010302.1 MGP_LPJ_G0008420.1 mouse_genomes_project 19 3279443 3279532 + Mir192 miRNA miRNA MGP_LPJ_T0051029.1 MGP_LPJ_G0024804.1 mouse_genomes_project 19 8901547 8916284 + MGP_LPJ_P0051029 Ms4a6b protein_coding protein_coding MGP_LPJ_T0051030.1 MGP_LPJ_G0024804.1 mouse_genomes_project 19 8903594 8915431 + MGP_LPJ_P0051030 Ms4a6b protein_coding protein_coding MGP_LPJ_T0051031.1 MGP_LPJ_G0024804.1 mouse_genomes_project 19 8903601 8916282 + MGP_LPJ_P0051031 Ms4a6b protein_coding nonsense_mediated_decay MGP_LPJ_T0051032.1 MGP_LPJ_G0024804.1 mouse_genomes_project 19 8903629 8906891 + Ms4a6b protein_coding retained_intron MGP_LPJ_T0051033.1 MGP_LPJ_G0024804.1 mouse_genomes_project 19 8906706 8912453 + MGP_LPJ_P0051033 Ms4a6b protein_coding nonsense_mediated_decay MGP_LPJ_T0050898.1 MGP_LPJ_G0024757.1 mouse_genomes_project 19 7303147 7316537 + MGP_LPJ_P0050898 Rab3il1 protein_coding protein_coding MGP_LPJ_T0050899.1 MGP_LPJ_G0024757.1 mouse_genomes_project 19 7306324 7324416 + MGP_LPJ_P0050899 Rab3il1 protein_coding protein_coding MGP_LPJ_T0050900.1 MGP_LPJ_G0024757.1 mouse_genomes_project 19 7306479 7323500 + MGP_LPJ_P0050900 Rab3il1 protein_coding protein_coding MGP_LPJ_T0050901.1 MGP_LPJ_G0024757.1 mouse_genomes_project 19 7320630 7322771 + Rab3il1 protein_coding retained_intron MGP_LPJ_T0050430.1 MGP_LPJ_G0024636.1 mouse_genomes_project 19 2556162 2557729 + MGP_LPJ_P0050430 Rnaseh2c protein_coding protein_coding MGP_LPJ_T0050431.1 MGP_LPJ_G0024636.1 mouse_genomes_project 19 2556176 2557157 + Rnaseh2c protein_coding retained_intron MGP_LPJ_T0050432.1 MGP_LPJ_G0024636.1 mouse_genomes_project 19 2556264 2557222 + Rnaseh2c protein_coding retained_intron MGP_LPJ_T0050433.1 MGP_LPJ_G0024636.1 mouse_genomes_project 19 2556524 2557228 + MGP_LPJ_P0050433 Rnaseh2c protein_coding protein_coding MGP_LPJ_T0050434.1 MGP_LPJ_G0024636.1 mouse_genomes_project 19 2556699 2557224 + Rnaseh2c protein_coding retained_intron MGP_LPJ_T0050219.1 MGP_LPJ_G0024565.1 mouse_genomes_project 19 928154 942127 + MGP_LPJ_P0050219 Pitpnm1 protein_coding protein_coding MGP_LPJ_T0050220.1 MGP_LPJ_G0024565.1 mouse_genomes_project 19 928202 942127 + Pitpnm1 protein_coding retained_intron MGP_LPJ_T0050221.1 MGP_LPJ_G0024565.1 mouse_genomes_project 19 928425 933091 + MGP_LPJ_P0050221 Pitpnm1 protein_coding protein_coding MGP_LPJ_T0050222.1 MGP_LPJ_G0024565.1 mouse_genomes_project 19 928778 942127 + MGP_LPJ_P0050222 Pitpnm1 protein_coding protein_coding MGP_LPJ_T0050223.1 MGP_LPJ_G0024565.1 mouse_genomes_project 19 936365 938069 + Pitpnm1 protein_coding retained_intron MGP_LPJ_T0050224.1 MGP_LPJ_G0024565.1 mouse_genomes_project 19 936913 940379 + Pitpnm1 protein_coding processed_transcript MGP_LPJ_T0050225.1 MGP_LPJ_G0024565.1 mouse_genomes_project 19 937809 938896 + Pitpnm1 protein_coding retained_intron MGP_LPJ_T0050226.1 MGP_LPJ_G0024565.1 mouse_genomes_project 19 938961 940186 + Pitpnm1 protein_coding retained_intron MGP_LPJ_T0050227.1 MGP_LPJ_G0024565.1 mouse_genomes_project 19 939322 940533 + Pitpnm1 protein_coding retained_intron MGP_LPJ_T0050228.1 MGP_LPJ_G0024565.1 mouse_genomes_project 19 940090 941777 + Pitpnm1 protein_coding retained_intron MGP_LPJ_T0050229.1 MGP_LPJ_G0024565.1 mouse_genomes_project 19 940481 942127 + Pitpnm1 protein_coding retained_intron MGP_LPJ_T0099298.1 MGP_LPJ_G0037561.1 mouse_genomes_project 19 35345130 35345236 - Gm23170 snRNA snRNA MGP_LPJ_T0050429.1 MGP_LPJ_G0024635.1 mouse_genomes_project 19 2524266 2527454 + MGP_LPJ_P0050429 Ap5b1 protein_coding protein_coding MGP_LPJ_T0099285.1 MGP_LPJ_G0037548.1 mouse_genomes_project 19 1818040 1818150 + Gm25334 snRNA snRNA MGP_LPJ_T0051540.1 MGP_LPJ_G0025027.1 mouse_genomes_project 19 38322415 38367560 + MGP_LPJ_P0051540 Cyp2c66 protein_coding protein_coding MGP_LPJ_T0051541.1 MGP_LPJ_G0025027.1 mouse_genomes_project 19 38322427 38367879 + MGP_LPJ_P0051541 Cyp2c66 protein_coding nonsense_mediated_decay MGP_LPJ_T0050151.1 MGP_LPJ_G0024549.1 mouse_genomes_project 19 649382 695635 + MGP_LPJ_P0050151 Chka protein_coding nonsense_mediated_decay MGP_LPJ_T0050152.1 MGP_LPJ_G0024549.1 mouse_genomes_project 19 649406 695639 + MGP_LPJ_P0050152 Chka protein_coding protein_coding MGP_LPJ_T0050153.1 MGP_LPJ_G0024549.1 mouse_genomes_project 19 649419 673202 + Chka protein_coding retained_intron MGP_LPJ_T0050154.1 MGP_LPJ_G0024549.1 mouse_genomes_project 19 649419 695637 + Chka protein_coding retained_intron MGP_LPJ_T0050155.1 MGP_LPJ_G0024549.1 mouse_genomes_project 19 649441 668959 + Chka protein_coding retained_intron MGP_LPJ_T0050156.1 MGP_LPJ_G0024549.1 mouse_genomes_project 19 649441 679903 + Chka protein_coding retained_intron MGP_LPJ_T0050157.1 MGP_LPJ_G0024549.1 mouse_genomes_project 19 649685 695634 + MGP_LPJ_P0050157 Chka protein_coding protein_coding MGP_LPJ_T0050158.1 MGP_LPJ_G0024549.1 mouse_genomes_project 19 649710 687141 + MGP_LPJ_P0050158 Chka protein_coding nonsense_mediated_decay MGP_LPJ_T0050159.1 MGP_LPJ_G0024549.1 mouse_genomes_project 19 649972 688727 + MGP_LPJ_P0050159 Chka protein_coding protein_coding MGP_LPJ_T0050160.1 MGP_LPJ_G0024549.1 mouse_genomes_project 19 675952 691204 + MGP_LPJ_P0050160 Chka protein_coding nonsense_mediated_decay MGP_LPJ_T0050161.1 MGP_LPJ_G0024549.1 mouse_genomes_project 19 676653 685862 + Chka protein_coding processed_transcript MGP_LPJ_T0050162.1 MGP_LPJ_G0024549.1 mouse_genomes_project 19 676667 685815 + Chka protein_coding retained_intron MGP_LPJ_T0050163.1 MGP_LPJ_G0024549.1 mouse_genomes_project 19 676693 687693 + Chka protein_coding processed_transcript MGP_LPJ_T0050164.1 MGP_LPJ_G0024549.1 mouse_genomes_project 19 693000 694927 + Chka protein_coding retained_intron MGP_LPJ_T0050177.1 MGP_LPJ_G0024551.1 mouse_genomes_project 19 710168 714016 - MGP_LPJ_P0050177 Ndufs8 protein_coding protein_coding MGP_LPJ_T0010299.1 MGP_LPJ_G0008417.1 mouse_genomes_project 19 2638981 2639054 - Mir6987 miRNA miRNA MGP_LPJ_T0051315.1 MGP_LPJ_G0024943.1 mouse_genomes_project 19 27451725 27480043 - MGP_LPJ_P0051315 Ak3 protein_coding protein_coding MGP_LPJ_T0051316.1 MGP_LPJ_G0024943.1 mouse_genomes_project 19 27456793 27458137 - MGP_LPJ_P0051316 Ak3 protein_coding protein_coding MGP_LPJ_T0051065.1 MGP_LPJ_G0024822.1 mouse_genomes_project 19 9567761 9568699 - MGP_LPJ_P0051065 Olfr1427 protein_coding protein_coding MGP_LPJ_T0051399.1 MGP_LPJ_G0024969.1 mouse_genomes_project 19 31327947 31370797 - MGP_LPJ_P0051399 Atad1 protein_coding protein_coding MGP_LPJ_T0051097.1 MGP_LPJ_G0024841.1 mouse_genomes_project 19 10327335 10362138 - MGP_LPJ_P0051097 Zfp91 protein_coding nonsense_mediated_decay MGP_LPJ_T0051099.1 MGP_LPJ_G0024841.1 mouse_genomes_project 19 10330695 10362138 - MGP_LPJ_P0051099 Zfp91 protein_coding protein_coding MGP_LPJ_T0051100.1 MGP_LPJ_G0024841.1 mouse_genomes_project 19 10335186 10356338 - Zfp91 protein_coding retained_intron MGP_LPJ_T0051193.1 MGP_LPJ_G0024902.1 mouse_genomes_project 19 18645736 18685021 - MGP_LPJ_P0051193 Aldh1a7 protein_coding protein_coding MGP_LPJ_T0098515.1 MGP_LPJ_G0036790.1 mouse_genomes_project 19 56014394 56020551 + Ppnr sense_intronic sense_intronic MGP_LPJ_T0051785.1 MGP_LPJ_G0025114.1 mouse_genomes_project 19 44645034 44651296 + MGP_LPJ_P0051785 Tlx1 protein_coding protein_coding MGP_LPJ_T0051786.1 MGP_LPJ_G0025114.1 mouse_genomes_project 19 44645823 44650752 + MGP_LPJ_P0051786 Tlx1 protein_coding protein_coding MGP_LPJ_T0051489.1 MGP_LPJ_G0025007.1 mouse_genomes_project 19 36313932 36414063 - MGP_LPJ_P0051489 Ide protein_coding protein_coding MGP_LPJ_T0051490.1 MGP_LPJ_G0025007.1 mouse_genomes_project 19 36315629 36349744 - Ide protein_coding processed_transcript MGP_LPJ_T0051491.1 MGP_LPJ_G0025007.1 mouse_genomes_project 19 36325781 36336081 - Ide protein_coding retained_intron MGP_LPJ_T0051492.1 MGP_LPJ_G0025007.1 mouse_genomes_project 19 36345698 36355925 - Ide protein_coding processed_transcript MGP_LPJ_T0051493.1 MGP_LPJ_G0025007.1 mouse_genomes_project 19 36346002 36383166 - Ide protein_coding retained_intron MGP_LPJ_T0011500.1 MGP_LPJ_G0009618.1 mouse_genomes_project 19 59139678 59139762 - Gm22561 misc_RNA misc_RNA MGP_LPJ_T0050532.1 MGP_LPJ_G0024665.1 mouse_genomes_project 19 3088208 3092390 - MGP_LPJ_P0050532 Zfpl1 protein_coding protein_coding MGP_LPJ_T0050533.1 MGP_LPJ_G0024665.1 mouse_genomes_project 19 3088211 3090278 - Zfpl1 protein_coding retained_intron MGP_LPJ_T0050534.1 MGP_LPJ_G0024665.1 mouse_genomes_project 19 3088614 3092362 - MGP_LPJ_P0050534 Zfpl1 protein_coding protein_coding MGP_LPJ_T0050535.1 MGP_LPJ_G0024665.1 mouse_genomes_project 19 3089311 3092140 - MGP_LPJ_P0050535 Zfpl1 protein_coding protein_coding MGP_LPJ_T0050536.1 MGP_LPJ_G0024665.1 mouse_genomes_project 19 3089641 3092341 - Zfpl1 protein_coding retained_intron MGP_LPJ_T0050537.1 MGP_LPJ_G0024665.1 mouse_genomes_project 19 3089661 3092351 - MGP_LPJ_P0050537 Zfpl1 protein_coding nonsense_mediated_decay MGP_LPJ_T0050538.1 MGP_LPJ_G0024665.1 mouse_genomes_project 19 3089702 3091754 - Zfpl1 protein_coding retained_intron MGP_LPJ_T0050539.1 MGP_LPJ_G0024665.1 mouse_genomes_project 19 3089707 3092391 - MGP_LPJ_P0050539 Zfpl1 protein_coding protein_coding MGP_LPJ_T0050540.1 MGP_LPJ_G0024665.1 mouse_genomes_project 19 3090052 3092374 - MGP_LPJ_P0050540 Zfpl1 protein_coding protein_coding MGP_LPJ_T0003891.1 MGP_LPJ_G0003484.1 mouse_genomes_project 19 58528985 58562155 + Gm16277 antisense antisense MGP_LPJ_T0010314.1 MGP_LPJ_G0008432.1 mouse_genomes_project 19 14045816 14045929 - Mir496b miRNA miRNA MGP_LPJ_T0007118.1 MGP_LPJ_G0005845.1 mouse_genomes_project 19 50547271 50654017 + Gm26629 lincRNA lincRNA MGP_LPJ_T0050978.1 MGP_LPJ_G0024787.1 mouse_genomes_project 19 8296386 8308764 - MGP_LPJ_P0050978 Ms4a10 protein_coding protein_coding MGP_LPJ_T0050979.1 MGP_LPJ_G0024787.1 mouse_genomes_project 19 8296390 8308739 - MGP_LPJ_P0050979 Ms4a10 protein_coding protein_coding MGP_LPJ_T0050980.1 MGP_LPJ_G0024787.1 mouse_genomes_project 19 8296393 8299950 - MGP_LPJ_P0050980 Ms4a10 protein_coding protein_coding MGP_LPJ_T0007126.1 MGP_LPJ_G0005850.1 mouse_genomes_project 19 57576548 57621555 - B230217O12Rik lincRNA lincRNA MGP_LPJ_T0013346.1 MGP_LPJ_G0011437.1 mouse_genomes_project 19 11653934 11654723 - processed_pseudogene processed_pseudogene MGP_LPJ_T0010333.1 MGP_LPJ_G0008451.1 mouse_genomes_project 19 43717310 43717371 + Mir5114 miRNA miRNA MGP_LPJ_T0051378.1 MGP_LPJ_G0024963.1 mouse_genomes_project 19 29655221 29658981 + MGP_LPJ_P0051378 Cstf2t protein_coding protein_coding MGP_LPJ_T0007130.1 MGP_LPJ_G0005854.1 mouse_genomes_project 19 60544488 60563291 + E330013P04Rik lincRNA lincRNA MGP_LPJ_T0007131.1 MGP_LPJ_G0005854.1 mouse_genomes_project 19 60544517 60552859 + E330013P04Rik lincRNA lincRNA MGP_LPJ_T0007132.1 MGP_LPJ_G0005854.1 mouse_genomes_project 19 60551063 60557097 + E330013P04Rik lincRNA lincRNA MGP_LPJ_T0052132.1 MGP_LPJ_G0025223.1 mouse_genomes_project 19 61194502 61198434 + MGP_LPJ_P0052132 Nanos1 protein_coding protein_coding MGP_LPJ_T0052091.1 MGP_LPJ_G0025202.1 mouse_genomes_project 19 57621788 57652591 + MGP_LPJ_P0052091 Fam160b1 protein_coding protein_coding MGP_LPJ_T0011498.1 MGP_LPJ_G0009616.1 mouse_genomes_project 19 38059454 38059574 + Gm25838 misc_RNA misc_RNA MGP_LPJ_T0050427.1 MGP_LPJ_G0024633.1 mouse_genomes_project 19 2453374 2454395 - MGP_LPJ_P0050427 1700020D05Rik protein_coding protein_coding MGP_LPJ_T0100534.1 MGP_LPJ_G0038797.1 mouse_genomes_project 19 5885500 5885569 + Gm22680 snoRNA snoRNA MGP_LPJ_T0051508.1 MGP_LPJ_G0025017.1 mouse_genomes_project 19 37250873 37302778 + MGP_LPJ_P0051508 Pde6c protein_coding protein_coding MGP_LPJ_T0051509.1 MGP_LPJ_G0025017.1 mouse_genomes_project 19 37250873 37302778 + MGP_LPJ_P0051509 Pde6c protein_coding protein_coding MGP_LPJ_T0051510.1 MGP_LPJ_G0025017.1 mouse_genomes_project 19 37251038 37302779 + MGP_LPJ_P0051510 Pde6c protein_coding unknown_likely_coding MGP_LPJ_T0051601.1 MGP_LPJ_G0025046.1 mouse_genomes_project 19 40197827 40268259 - MGP_LPJ_P0051601 Blnk protein_coding protein_coding MGP_LPJ_T0051602.1 MGP_LPJ_G0025046.1 mouse_genomes_project 19 40197827 40267872 - MGP_LPJ_P0051602 Blnk protein_coding protein_coding MGP_LPJ_T0051603.1 MGP_LPJ_G0025046.1 mouse_genomes_project 19 40234280 40268259 - Blnk protein_coding retained_intron MGP_LPJ_T0051022.1 MGP_LPJ_G0024803.1 mouse_genomes_project 19 8840723 8892807 + Gm8369 protein_coding processed_transcript MGP_LPJ_T0051023.1 MGP_LPJ_G0024803.1 mouse_genomes_project 19 8840825 8841962 + Gm8369 protein_coding processed_transcript MGP_LPJ_T0051024.1 MGP_LPJ_G0024803.1 mouse_genomes_project 19 8840894 8841851 + Gm8369 protein_coding retained_intron MGP_LPJ_T0051025.1 MGP_LPJ_G0024803.1 mouse_genomes_project 19 8878003 8897615 + MGP_LPJ_P0051025 Gm8369 protein_coding protein_coding MGP_LPJ_T0051026.1 MGP_LPJ_G0024803.1 mouse_genomes_project 19 8878003 8896746 + MGP_LPJ_P0051026 Gm8369 protein_coding nonsense_mediated_decay MGP_LPJ_T0051027.1 MGP_LPJ_G0024803.1 mouse_genomes_project 19 8878015 8894641 + Gm8369 protein_coding retained_intron MGP_LPJ_T0051028.1 MGP_LPJ_G0024803.1 mouse_genomes_project 19 8888851 8897615 + MGP_LPJ_P0051028 Gm8369 protein_coding protein_coding MGP_LPJ_T0051038.1 MGP_LPJ_G0024807.1 mouse_genomes_project 19 9005289 9013436 - MGP_LPJ_P0051038 Ms4a2 protein_coding protein_coding MGP_LPJ_T0051039.1 MGP_LPJ_G0024807.1 mouse_genomes_project 19 9006723 9013471 - MGP_LPJ_P0051039 Ms4a2 protein_coding protein_coding MGP_LPJ_T0051040.1 MGP_LPJ_G0024807.1 mouse_genomes_project 19 9006959 9013395 - MGP_LPJ_P0051040 Ms4a2 protein_coding protein_coding MGP_LPJ_T0051041.1 MGP_LPJ_G0024807.1 mouse_genomes_project 19 9007239 9013411 - MGP_LPJ_P0051041 Ms4a2 protein_coding protein_coding MGP_LPJ_T0051042.1 MGP_LPJ_G0024807.1 mouse_genomes_project 19 9008695 9013440 - Ms4a2 protein_coding processed_transcript MGP_LPJ_T0051303.1 MGP_LPJ_G0024940.1 mouse_genomes_project 19 27315736 27334900 - MGP_LPJ_P0051303 4430402I18Rik protein_coding protein_coding MGP_LPJ_T0051305.1 MGP_LPJ_G0024940.1 mouse_genomes_project 19 27324253 27397147 - MGP_LPJ_P0051305 4430402I18Rik protein_coding nonsense_mediated_decay MGP_LPJ_T0051306.1 MGP_LPJ_G0024940.1 mouse_genomes_project 19 27341138 27393385 - MGP_LPJ_P0051306 4430402I18Rik protein_coding unknown_likely_coding MGP_LPJ_T0051307.1 MGP_LPJ_G0024940.1 mouse_genomes_project 19 27346520 27397217 - MGP_LPJ_P0051307 4430402I18Rik protein_coding protein_coding MGP_LPJ_T0051308.1 MGP_LPJ_G0024940.1 mouse_genomes_project 19 27346523 27352231 - 4430402I18Rik protein_coding processed_transcript MGP_LPJ_T0051309.1 MGP_LPJ_G0024940.1 mouse_genomes_project 19 27346678 27393005 - MGP_LPJ_P0051309 4430402I18Rik protein_coding protein_coding MGP_LPJ_T0051310.1 MGP_LPJ_G0024940.1 mouse_genomes_project 19 27346678 27393005 - MGP_LPJ_P0051310 4430402I18Rik protein_coding protein_coding MGP_LPJ_T0051311.1 MGP_LPJ_G0024940.1 mouse_genomes_project 19 27371510 27393326 - MGP_LPJ_P0051311 4430402I18Rik protein_coding protein_coding MGP_LPJ_T0050629.1 MGP_LPJ_G0024681.1 mouse_genomes_project 19 3404551 3418208 + MGP_LPJ_P0050629 Pygm protein_coding protein_coding MGP_LPJ_T0050630.1 MGP_LPJ_G0024681.1 mouse_genomes_project 19 3404567 3418197 + MGP_LPJ_P0050630 Pygm protein_coding protein_coding MGP_LPJ_T0050631.1 MGP_LPJ_G0024681.1 mouse_genomes_project 19 3412868 3414342 + Pygm protein_coding retained_intron MGP_LPJ_T0050632.1 MGP_LPJ_G0024681.1 mouse_genomes_project 19 3417243 3418040 + Pygm protein_coding retained_intron MGP_LPJ_T0051071.1 MGP_LPJ_G0024828.1 mouse_genomes_project 19 9828366 9848405 - MGP_LPJ_P0051071 Olfr1436 protein_coding protein_coding MGP_LPJ_T0052001.1 MGP_LPJ_G0025186.1 mouse_genomes_project 19 55394771 55439394 + MGP_LPJ_P0052001 Acsl5 protein_coding protein_coding MGP_LPJ_T0098225.1 MGP_LPJ_G0036506.1 mouse_genomes_project 19 50693078 50693115 + Gm25659 rRNA rRNA MGP_LPJ_T0051907.1 MGP_LPJ_G0025151.1 mouse_genomes_project 19 46754474 46763560 - MGP_LPJ_P0051907 Usmg5 protein_coding protein_coding MGP_LPJ_T0050893.1 MGP_LPJ_G0024753.1 mouse_genomes_project 19 7121832 7127079 + MGP_LPJ_P0050893 Scgb2a2 protein_coding protein_coding MGP_LPJ_T0051812.1 MGP_LPJ_G0025123.1 mouse_genomes_project 19 45327005 45329460 - MGP_LPJ_P0051812 Kcnip2 protein_coding protein_coding MGP_LPJ_T0051813.1 MGP_LPJ_G0025123.1 mouse_genomes_project 19 45327506 45352359 - Kcnip2 protein_coding retained_intron MGP_LPJ_T0051814.1 MGP_LPJ_G0025123.1 mouse_genomes_project 19 45327506 45352398 - MGP_LPJ_P0051814 Kcnip2 protein_coding protein_coding MGP_LPJ_T0051815.1 MGP_LPJ_G0025123.1 mouse_genomes_project 19 45327506 45352359 - MGP_LPJ_P0051815 Kcnip2 protein_coding protein_coding MGP_LPJ_T0051816.1 MGP_LPJ_G0025123.1 mouse_genomes_project 19 45328509 45348629 - MGP_LPJ_P0051816 Kcnip2 protein_coding protein_coding MGP_LPJ_T0051817.1 MGP_LPJ_G0025123.1 mouse_genomes_project 19 45328608 45352362 - MGP_LPJ_P0051817 Kcnip2 protein_coding protein_coding MGP_LPJ_T0051818.1 MGP_LPJ_G0025123.1 mouse_genomes_project 19 45328830 45352170 - MGP_LPJ_P0051818 Kcnip2 protein_coding protein_coding MGP_LPJ_T0051819.1 MGP_LPJ_G0025123.1 mouse_genomes_project 19 45328830 45330759 - MGP_LPJ_P0051819 Kcnip2 protein_coding protein_coding MGP_LPJ_T0051820.1 MGP_LPJ_G0025123.1 mouse_genomes_project 19 45329151 45352140 - MGP_LPJ_P0051820 Kcnip2 protein_coding protein_coding MGP_LPJ_T0051821.1 MGP_LPJ_G0025123.1 mouse_genomes_project 19 45330195 45332099 - MGP_LPJ_P0051821 Kcnip2 protein_coding protein_coding MGP_LPJ_T0013341.1 MGP_LPJ_G0011432.1 mouse_genomes_project 19 8753458 8754515 - processed_pseudogene processed_pseudogene MGP_LPJ_T0051450.1 MGP_LPJ_G0024997.1 mouse_genomes_project 19 35024209 35047613 + MGP_LPJ_P0051450 Rpp30 protein_coding protein_coding MGP_LPJ_T0101515.1 MGP_LPJ_G0039643.1 mouse_genomes_project 19 59046296 59048705 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101516.1 MGP_LPJ_G0039643.1 mouse_genomes_project 19 59046296 59046711 + transcribed_unprocessed_pseudogene processed_transcript MGP_LPJ_T0101517.1 MGP_LPJ_G0039643.1 mouse_genomes_project 19 59046462 59064423 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_LPJ_T0051979.1 MGP_LPJ_G0025177.1 mouse_genomes_project 19 53619593 53689060 + MGP_LPJ_P0051979 Smc3 protein_coding protein_coding MGP_LPJ_T0051980.1 MGP_LPJ_G0025177.1 mouse_genomes_project 19 53677818 53678847 + Smc3 protein_coding retained_intron MGP_LPJ_T0051981.1 MGP_LPJ_G0025177.1 mouse_genomes_project 19 53685468 53688035 + Smc3 protein_coding retained_intron MGP_LPJ_T0051163.1 MGP_LPJ_G0024892.1 mouse_genomes_project 19 15187378 15194631 + MGP_LPJ_P0051163 Rfk protein_coding protein_coding MGP_LPJ_T0051164.1 MGP_LPJ_G0024892.1 mouse_genomes_project 19 15187903 15193140 + Rfk protein_coding processed_transcript MGP_LPJ_T0051165.1 MGP_LPJ_G0024892.1 mouse_genomes_project 19 15190772 15193243 + Rfk protein_coding processed_transcript MGP_LPJ_T0051178.1 MGP_LPJ_G0024897.1 mouse_genomes_project 19 16566074 16571301 + MGP_LPJ_P0051178 D030056L22Rik protein_coding protein_coding MGP_LPJ_T0051179.1 MGP_LPJ_G0024897.1 mouse_genomes_project 19 16566117 16571301 + MGP_LPJ_P0051179 D030056L22Rik protein_coding protein_coding MGP_LPJ_T0100529.1 MGP_LPJ_G0038792.1 mouse_genomes_project 19 5884152 5884224 + Gm25855 snoRNA snoRNA MGP_LPJ_T0013359.1 MGP_LPJ_G0011450.1 mouse_genomes_project 19 31121434 31149067 + processed_pseudogene processed_pseudogene MGP_LPJ_T0050562.1 MGP_LPJ_G0024672.1 mouse_genomes_project 19 3191634 3236437 + MGP_LPJ_P0050562 Majin protein_coding protein_coding MGP_LPJ_T0050563.1 MGP_LPJ_G0024672.1 mouse_genomes_project 19 3191713 3236443 + MGP_LPJ_P0050563 Majin protein_coding protein_coding MGP_LPJ_T0050247.1 MGP_LPJ_G0024571.1 mouse_genomes_project 19 988699 995074 - MGP_LPJ_P0050247 Rps6kb2 protein_coding protein_coding MGP_LPJ_T0050248.1 MGP_LPJ_G0024571.1 mouse_genomes_project 19 988705 995125 - MGP_LPJ_P0050248 Rps6kb2 protein_coding nonsense_mediated_decay MGP_LPJ_T0050249.1 MGP_LPJ_G0024571.1 mouse_genomes_project 19 988708 995145 - Rps6kb2 protein_coding retained_intron MGP_LPJ_T0050250.1 MGP_LPJ_G0024571.1 mouse_genomes_project 19 988708 990066 - Rps6kb2 protein_coding retained_intron MGP_LPJ_T0050251.1 MGP_LPJ_G0024571.1 mouse_genomes_project 19 988708 995129 - MGP_LPJ_P0050251 Rps6kb2 protein_coding nonsense_mediated_decay MGP_LPJ_T0050252.1 MGP_LPJ_G0024571.1 mouse_genomes_project 19 988899 994159 - Rps6kb2 protein_coding processed_transcript MGP_LPJ_T0050253.1 MGP_LPJ_G0024571.1 mouse_genomes_project 19 988899 995114 - MGP_LPJ_P0050253 Rps6kb2 protein_coding nonsense_mediated_decay MGP_LPJ_T0050254.1 MGP_LPJ_G0024571.1 mouse_genomes_project 19 994088 995129 - Rps6kb2 protein_coding processed_transcript MGP_LPJ_T0050255.1 MGP_LPJ_G0024571.1 mouse_genomes_project 19 994345 995159 - Rps6kb2 protein_coding retained_intron MGP_LPJ_T0050256.1 MGP_LPJ_G0024571.1 mouse_genomes_project 19 994643 995183 - Rps6kb2 protein_coding processed_transcript MGP_LPJ_T0100532.1 MGP_LPJ_G0038795.1 mouse_genomes_project 19 5885027 5885103 + Gm24453 snoRNA snoRNA MGP_LPJ_T0050909.1 MGP_LPJ_G0024762.1 mouse_genomes_project 19 7503927 7507738 + Tmem258 protein_coding processed_transcript MGP_LPJ_T0050910.1 MGP_LPJ_G0024762.1 mouse_genomes_project 19 7503927 7507738 + MGP_LPJ_P0050910 Tmem258 protein_coding protein_coding MGP_LPJ_T0050911.1 MGP_LPJ_G0024762.1 mouse_genomes_project 19 7504131 7507732 + Tmem258 protein_coding retained_intron MGP_LPJ_T0050912.1 MGP_LPJ_G0024762.1 mouse_genomes_project 19 7505946 7507738 + MGP_LPJ_P0050912 Tmem258 protein_coding protein_coding MGP_LPJ_T0003865.1 MGP_LPJ_G0003464.1 mouse_genomes_project 19 3571964 3573093 - Gm14967 antisense antisense MGP_LPJ_T0007124.1 MGP_LPJ_G0005848.1 mouse_genomes_project 19 53471654 53473744 + 4833407H14Rik lincRNA lincRNA MGP_LPJ_T0007116.1 MGP_LPJ_G0005843.1 mouse_genomes_project 19 45556760 45575054 + 4930505N22Rik lincRNA lincRNA MGP_LPJ_T0050754.1 MGP_LPJ_G0024712.1 mouse_genomes_project 19 4410149 4475372 - MGP_LPJ_P0050754 Rtn3 protein_coding protein_coding MGP_LPJ_T0050755.1 MGP_LPJ_G0024712.1 mouse_genomes_project 19 4410149 4475372 - MGP_LPJ_P0050755 Rtn3 protein_coding protein_coding MGP_LPJ_T0050756.1 MGP_LPJ_G0024712.1 mouse_genomes_project 19 4410149 4475364 - MGP_LPJ_P0050756 Rtn3 protein_coding protein_coding MGP_LPJ_T0050757.1 MGP_LPJ_G0024712.1 mouse_genomes_project 19 4411276 4475302 - MGP_LPJ_P0050757 Rtn3 protein_coding protein_coding MGP_LPJ_T0050564.1 MGP_LPJ_G0024673.1 mouse_genomes_project 19 3238597 3239986 + MGP_LPJ_P0050564 Gpha2 protein_coding protein_coding MGP_LPJ_T0050565.1 MGP_LPJ_G0024673.1 mouse_genomes_project 19 3238605 3239986 + MGP_LPJ_P0050565 Gpha2 protein_coding protein_coding MGP_LPJ_T0051747.1 MGP_LPJ_G0025096.1 mouse_genomes_project 19 43612578 43652625 + MGP_LPJ_P0051747 Scd3 protein_coding protein_coding MGP_LPJ_T0017653.1 MGP_LPJ_G0015299.1 mouse_genomes_project 19 8821804 8839363 - processed_transcript antisense MGP_LPJ_T0017654.1 MGP_LPJ_G0015299.1 mouse_genomes_project 19 8831852 8839364 - processed_transcript antisense MGP_LPJ_T0017655.1 MGP_LPJ_G0015299.1 mouse_genomes_project 19 8831970 8839321 - processed_transcript retained_intron MGP_LPJ_T0051697.1 MGP_LPJ_G0025081.1 mouse_genomes_project 19 42870589 42896930 - MGP_LPJ_P0051697 Got1 protein_coding protein_coding MGP_LPJ_T0051698.1 MGP_LPJ_G0025081.1 mouse_genomes_project 19 42870858 42886692 - MGP_LPJ_P0051698 Got1 protein_coding nonsense_mediated_decay MGP_LPJ_T0051699.1 MGP_LPJ_G0025081.1 mouse_genomes_project 19 42871154 42875561 - Got1 protein_coding retained_intron MGP_LPJ_T0051700.1 MGP_LPJ_G0025081.1 mouse_genomes_project 19 42882968 42896810 - Got1 protein_coding processed_transcript MGP_LPJ_T0051232.1 MGP_LPJ_G0024921.1 mouse_genomes_project 19 22470119 22622023 - MGP_LPJ_P0051232 Pip5k1b protein_coding protein_coding MGP_LPJ_T0051233.1 MGP_LPJ_G0024921.1 mouse_genomes_project 19 22577063 22745286 - Pip5k1b protein_coding retained_intron MGP_LPJ_T0051234.1 MGP_LPJ_G0024921.1 mouse_genomes_project 19 22618287 22745237 - Pip5k1b protein_coding processed_transcript MGP_LPJ_T0051125.1 MGP_LPJ_G0024867.1 mouse_genomes_project 19 11121571 11124379 + MGP_LPJ_P0051125 protein_coding protein_coding MGP_LPJ_T0051134.1 MGP_LPJ_G0024876.1 mouse_genomes_project 19 11422901 11423953 - MGP_LPJ_P0051134 Olfr1499 protein_coding protein_coding MGP_LPJ_T0052115.1 MGP_LPJ_G0025213.1 mouse_genomes_project 19 59353496 59457836 - MGP_LPJ_P0052115 Shtn1 protein_coding protein_coding MGP_LPJ_T0051684.1 MGP_LPJ_G0025077.1 mouse_genomes_project 19 42056264 42087146 - MGP_LPJ_P0051684 Pyroxd2 protein_coding protein_coding MGP_LPJ_T0051435.1 MGP_LPJ_G0024989.1 mouse_genomes_project 19 33447526 33449194 + MGP_LPJ_P0051435 protein_coding protein_coding MGP_LPJ_T0010305.1 MGP_LPJ_G0008423.1 mouse_genomes_project 19 3758431 3758490 - Mir5046 miRNA miRNA MGP_LPJ_T0050387.1 MGP_LPJ_G0024623.1 mouse_genomes_project 19 2368570 2370484 - MGP_LPJ_P0050387 Drap1 protein_coding protein_coding MGP_LPJ_T0050388.1 MGP_LPJ_G0024623.1 mouse_genomes_project 19 2368574 2369693 - Drap1 protein_coding retained_intron MGP_LPJ_T0050389.1 MGP_LPJ_G0024623.1 mouse_genomes_project 19 2368578 2369990 - Drap1 protein_coding retained_intron MGP_LPJ_T0050390.1 MGP_LPJ_G0024623.1 mouse_genomes_project 19 2368596 2370557 - Drap1 protein_coding retained_intron MGP_LPJ_T0050391.1 MGP_LPJ_G0024623.1 mouse_genomes_project 19 2368596 2370691 - MGP_LPJ_P0050391 Drap1 protein_coding protein_coding MGP_LPJ_T0050392.1 MGP_LPJ_G0024623.1 mouse_genomes_project 19 2368630 2369851 - Drap1 protein_coding retained_intron MGP_LPJ_T0050393.1 MGP_LPJ_G0024623.1 mouse_genomes_project 19 2369376 2370549 - Drap1 protein_coding retained_intron MGP_LPJ_T0051976.1 MGP_LPJ_G0025174.1 mouse_genomes_project 19 53371377 53371578 - MGP_LPJ_P0051976 Gm10197 protein_coding protein_coding MGP_LPJ_T0050179.1 MGP_LPJ_G0024553.1 mouse_genomes_project 19 738809 755309 + MGP_LPJ_P0050179 Unc93b1 protein_coding protein_coding MGP_LPJ_T0050180.1 MGP_LPJ_G0024553.1 mouse_genomes_project 19 738849 740369 + Unc93b1 protein_coding retained_intron MGP_LPJ_T0050181.1 MGP_LPJ_G0024553.1 mouse_genomes_project 19 738880 755312 + MGP_LPJ_P0050181 Unc93b1 protein_coding protein_coding MGP_LPJ_T0050182.1 MGP_LPJ_G0024553.1 mouse_genomes_project 19 748408 755309 + Unc93b1 protein_coding retained_intron MGP_LPJ_T0050795.1 MGP_LPJ_G0024726.1 mouse_genomes_project 19 5896296 5901016 + MGP_LPJ_P0050795 Wdr74 protein_coding protein_coding MGP_LPJ_T0051671.1 MGP_LPJ_G0025073.1 mouse_genomes_project 19 41561152 41587524 + MGP_LPJ_P0051671 Golga7b protein_coding protein_coding MGP_LPJ_T0051672.1 MGP_LPJ_G0025073.1 mouse_genomes_project 19 41571102 41587524 + MGP_LPJ_P0051672 Golga7b protein_coding protein_coding MGP_LPJ_T0051546.1 MGP_LPJ_G0025030.1 mouse_genomes_project 19 38657826 38732332 + MGP_LPJ_P0051546 Cyp2c39 protein_coding protein_coding MGP_LPJ_T0050476.1 MGP_LPJ_G0024650.1 mouse_genomes_project 19 2857466 2860435 - MGP_LPJ_P0050476 Tigd3 protein_coding protein_coding MGP_LPJ_T0051914.1 MGP_LPJ_G0025157.1 mouse_genomes_project 19 46862532 46945844 + MGP_LPJ_P0051914 Neurl1a protein_coding protein_coding MGP_LPJ_T0051915.1 MGP_LPJ_G0025157.1 mouse_genomes_project 19 46915209 46945844 + MGP_LPJ_P0051915 Neurl1a protein_coding protein_coding MGP_LPJ_T0051722.1 MGP_LPJ_G0025089.1 mouse_genomes_project 19 43354885 43388070 - MGP_LPJ_P0051722 Cpn1 protein_coding protein_coding MGP_LPJ_T0051723.1 MGP_LPJ_G0025089.1 mouse_genomes_project 19 43362457 43369266 - Cpn1 protein_coding retained_intron MGP_LPJ_T0051289.1 MGP_LPJ_G0024938.1 mouse_genomes_project 19 26642556 27089197 - MGP_LPJ_P0051289 Glis3 protein_coding protein_coding MGP_LPJ_T0051290.1 MGP_LPJ_G0024938.1 mouse_genomes_project 19 26646059 26718536 - Glis3 protein_coding processed_transcript MGP_LPJ_T0051291.1 MGP_LPJ_G0024938.1 mouse_genomes_project 19 26646076 27088786 - MGP_LPJ_P0051291 Glis3 protein_coding nonsense_mediated_decay MGP_LPJ_T0051292.1 MGP_LPJ_G0024938.1 mouse_genomes_project 19 26646138 26690610 - Glis3 protein_coding processed_transcript MGP_LPJ_T0051293.1 MGP_LPJ_G0024938.1 mouse_genomes_project 19 26646685 26943224 - Glis3 protein_coding retained_intron MGP_LPJ_T0051294.1 MGP_LPJ_G0024938.1 mouse_genomes_project 19 26647663 26667521 - Glis3 protein_coding retained_intron MGP_LPJ_T0051295.1 MGP_LPJ_G0024938.1 mouse_genomes_project 19 26744489 27089197 - MGP_LPJ_P0051295 Glis3 protein_coding protein_coding MGP_LPJ_T0051296.1 MGP_LPJ_G0024938.1 mouse_genomes_project 19 26934650 27087810 - MGP_LPJ_P0051296 Glis3 protein_coding nonsense_mediated_decay MGP_LPJ_T0051297.1 MGP_LPJ_G0024938.1 mouse_genomes_project 19 26934650 27074801 - MGP_LPJ_P0051297 Glis3 protein_coding protein_coding MGP_LPJ_T0051298.1 MGP_LPJ_G0024938.1 mouse_genomes_project 19 26934650 27087810 - MGP_LPJ_P0051298 Glis3 protein_coding protein_coding MGP_LPJ_T0003886.1 MGP_LPJ_G0003479.1 mouse_genomes_project 19 45285971 45288745 + Gm15491 antisense antisense MGP_LPJ_T0050873.1 MGP_LPJ_G0024746.1 mouse_genomes_project 19 6113151 6125985 + MGP_LPJ_P0050873 Eml3 protein_coding protein_coding MGP_LPJ_T0050874.1 MGP_LPJ_G0024746.1 mouse_genomes_project 19 6113388 6126013 + MGP_LPJ_P0050874 Eml3 protein_coding unknown_likely_coding MGP_LPJ_T0051522.1 MGP_LPJ_G0025021.1 mouse_genomes_project 19 37621087 37662810 + Plce1 protein_coding processed_transcript MGP_LPJ_T0051523.1 MGP_LPJ_G0025021.1 mouse_genomes_project 19 37621099 37951330 + MGP_LPJ_P0051523 Plce1 protein_coding protein_coding MGP_LPJ_T0051524.1 MGP_LPJ_G0025021.1 mouse_genomes_project 19 37662940 37952960 + MGP_LPJ_P0051524 Plce1 protein_coding protein_coding MGP_LPJ_T0051525.1 MGP_LPJ_G0025021.1 mouse_genomes_project 19 37662952 37950695 + MGP_LPJ_P0051525 Plce1 protein_coding protein_coding MGP_LPJ_T0051526.1 MGP_LPJ_G0025021.1 mouse_genomes_project 19 37732223 37805773 + MGP_LPJ_P0051526 Plce1 protein_coding protein_coding MGP_LPJ_T0051527.1 MGP_LPJ_G0025021.1 mouse_genomes_project 19 37886536 37951488 + Plce1 protein_coding retained_intron MGP_LPJ_T0051528.1 MGP_LPJ_G0025021.1 mouse_genomes_project 19 37901595 37918231 + Plce1 protein_coding retained_intron MGP_LPJ_T0051406.1 MGP_LPJ_G0024973.1 mouse_genomes_project 19 32157531 32350022 - MGP_LPJ_P0051406 Lipo3 protein_coding protein_coding MGP_LPJ_T0050235.1 MGP_LPJ_G0024567.1 mouse_genomes_project 19 965239 969958 - MGP_LPJ_P0050235 Cabp4 protein_coding protein_coding MGP_LPJ_T0050782.1 MGP_LPJ_G0024722.1 mouse_genomes_project 19 5741511 5762038 + MGP_LPJ_P0050782 Slc22a8 protein_coding protein_coding MGP_LPJ_T0050783.1 MGP_LPJ_G0024722.1 mouse_genomes_project 19 5741511 5762038 + MGP_LPJ_P0050783 Slc22a8 protein_coding protein_coding MGP_LPJ_T0050381.1 MGP_LPJ_G0024618.1 mouse_genomes_project 19 2282759 2287629 - MGP_LPJ_P0050381 Cst6 protein_coding protein_coding MGP_LPJ_T0051172.1 MGP_LPJ_G0024895.1 mouse_genomes_project 19 16479705 16484104 + Nmrk1 protein_coding retained_intron MGP_LPJ_T0051173.1 MGP_LPJ_G0024895.1 mouse_genomes_project 19 16479705 16500225 + MGP_LPJ_P0051173 Nmrk1 protein_coding protein_coding MGP_LPJ_T0051174.1 MGP_LPJ_G0024895.1 mouse_genomes_project 19 16479705 16499958 + MGP_LPJ_P0051174 Nmrk1 protein_coding protein_coding MGP_LPJ_T0051175.1 MGP_LPJ_G0024895.1 mouse_genomes_project 19 16479714 16488940 + MGP_LPJ_P0051175 Nmrk1 protein_coding nonsense_mediated_decay MGP_LPJ_T0051176.1 MGP_LPJ_G0024895.1 mouse_genomes_project 19 16479717 16485018 + Nmrk1 protein_coding retained_intron MGP_LPJ_T0013360.1 MGP_LPJ_G0011451.1 mouse_genomes_project 19 39871487 39872245 + processed_pseudogene processed_pseudogene MGP_LPJ_T0050760.1 MGP_LPJ_G0024714.1 mouse_genomes_project 19 4553925 4585330 + MGP_LPJ_P0050760 Pla2g16 protein_coding protein_coding MGP_LPJ_T0050761.1 MGP_LPJ_G0024714.1 mouse_genomes_project 19 4553925 4578513 + MGP_LPJ_P0050761 Pla2g16 protein_coding protein_coding MGP_LPJ_T0050762.1 MGP_LPJ_G0024714.1 mouse_genomes_project 19 4553943 4575918 + MGP_LPJ_P0050762 Pla2g16 protein_coding protein_coding MGP_LPJ_T0050763.1 MGP_LPJ_G0024714.1 mouse_genomes_project 19 4553951 4583496 + MGP_LPJ_P0050763 Pla2g16 protein_coding protein_coding MGP_LPJ_T0099289.1 MGP_LPJ_G0037552.1 mouse_genomes_project 19 12376921 12377044 - Gm26026 snRNA snRNA MGP_LPJ_T0051048.1 MGP_LPJ_G0024810.1 mouse_genomes_project 19 9063573 9082375 - MGP_LPJ_P0051048 Oosp1 protein_coding protein_coding MGP_LPJ_T0051049.1 MGP_LPJ_G0024810.1 mouse_genomes_project 19 9063648 9082253 - MGP_LPJ_P0051049 Oosp1 protein_coding protein_coding MGP_LPJ_T0051050.1 MGP_LPJ_G0024810.1 mouse_genomes_project 19 9063786 9082259 - MGP_LPJ_P0051050 Oosp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0051382.1 MGP_LPJ_G0024966.1 mouse_genomes_project 19 30753550 31027831 - MGP_LPJ_P0051382 Sgms1 protein_coding protein_coding MGP_LPJ_T0051383.1 MGP_LPJ_G0024966.1 mouse_genomes_project 19 30753553 30986209 - MGP_LPJ_P0051383 Sgms1 protein_coding protein_coding MGP_LPJ_T0051384.1 MGP_LPJ_G0024966.1 mouse_genomes_project 19 30754302 30839583 - MGP_LPJ_P0051384 Sgms1 protein_coding protein_coding MGP_LPJ_T0051385.1 MGP_LPJ_G0024966.1 mouse_genomes_project 19 30754968 30910315 - MGP_LPJ_P0051385 Sgms1 protein_coding nonsense_mediated_decay MGP_LPJ_T0051386.1 MGP_LPJ_G0024966.1 mouse_genomes_project 19 30754970 30794200 - MGP_LPJ_P0051386 Sgms1 protein_coding nonsense_mediated_decay MGP_LPJ_T0051387.1 MGP_LPJ_G0024966.1 mouse_genomes_project 19 30792232 31029028 - Sgms1 protein_coding retained_intron MGP_LPJ_T0051388.1 MGP_LPJ_G0024966.1 mouse_genomes_project 19 30794037 30831426 - MGP_LPJ_P0051388 Sgms1 protein_coding protein_coding MGP_LPJ_T0051389.1 MGP_LPJ_G0024966.1 mouse_genomes_project 19 30794134 30870974 - Sgms1 protein_coding processed_transcript MGP_LPJ_T0051390.1 MGP_LPJ_G0024966.1 mouse_genomes_project 19 30794146 30958864 - Sgms1 protein_coding processed_transcript MGP_LPJ_T0051391.1 MGP_LPJ_G0024966.1 mouse_genomes_project 19 30794275 30910289 - Sgms1 protein_coding processed_transcript MGP_LPJ_T0051392.1 MGP_LPJ_G0024966.1 mouse_genomes_project 19 30848101 30880199 - Sgms1 protein_coding processed_transcript MGP_LPJ_T0051393.1 MGP_LPJ_G0024966.1 mouse_genomes_project 19 30852500 30924823 - Sgms1 protein_coding retained_intron MGP_LPJ_T0051394.1 MGP_LPJ_G0024966.1 mouse_genomes_project 19 30855231 30870988 - Sgms1 protein_coding retained_intron MGP_LPJ_T0051395.1 MGP_LPJ_G0024966.1 mouse_genomes_project 19 30924522 31027782 - Sgms1 protein_coding retained_intron MGP_LPJ_T0050940.1 MGP_LPJ_G0024775.1 mouse_genomes_project 19 7949135 7981379 + MGP_LPJ_P0050940 Vwce protein_coding protein_coding MGP_LPJ_T0003892.1 MGP_LPJ_G0003485.1 mouse_genomes_project 19 59646023 59647931 - Gm29261 antisense antisense MGP_LPJ_T0052107.1 MGP_LPJ_G0025209.1 mouse_genomes_project 19 59113295 59130604 + MGP_LPJ_P0052107 Pnliprp2 protein_coding protein_coding MGP_LPJ_T0051137.1 MGP_LPJ_G0024879.1 mouse_genomes_project 19 11485640 11487065 + MGP_LPJ_P0051137 Olfr1502 protein_coding protein_coding MGP_LPJ_T0051773.1 MGP_LPJ_G0025109.1 mouse_genomes_project 19 44482907 44490905 + MGP_LPJ_P0051773 Peo1 protein_coding protein_coding MGP_LPJ_T0052141.1 MGP_LPJ_G0025226.1 mouse_genomes_project 19 61276712 61304604 - MGP_LPJ_P0052141 Sfxn4 protein_coding nonsense_mediated_decay MGP_LPJ_T0052142.1 MGP_LPJ_G0025226.1 mouse_genomes_project 19 61281916 61304656 - MGP_LPJ_P0052142 Sfxn4 protein_coding protein_coding MGP_LPJ_T0052143.1 MGP_LPJ_G0025226.1 mouse_genomes_project 19 61281923 61304514 - MGP_LPJ_P0052143 Sfxn4 protein_coding unknown_likely_coding MGP_LPJ_T0052144.1 MGP_LPJ_G0025226.1 mouse_genomes_project 19 61281926 61304601 - MGP_LPJ_P0052144 Sfxn4 protein_coding nonsense_mediated_decay MGP_LPJ_T0051340.1 MGP_LPJ_G0024952.1 mouse_genomes_project 19 28073119 28121095 - MGP_LPJ_P0051340 Ermp1 protein_coding protein_coding MGP_LPJ_T0051341.1 MGP_LPJ_G0024952.1 mouse_genomes_project 19 28073123 28077988 - Ermp1 protein_coding processed_transcript MGP_LPJ_T0051342.1 MGP_LPJ_G0024952.1 mouse_genomes_project 19 28075954 28120867 - MGP_LPJ_P0051342 Ermp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0051343.1 MGP_LPJ_G0024952.1 mouse_genomes_project 19 28078159 28118707 - MGP_LPJ_P0051343 Ermp1 protein_coding nonsense_mediated_decay MGP_LPJ_T0051344.1 MGP_LPJ_G0024952.1 mouse_genomes_project 19 28078374 28078977 - Ermp1 protein_coding retained_intron MGP_LPJ_T0051345.1 MGP_LPJ_G0024952.1 mouse_genomes_project 19 28093734 28107469 - Ermp1 protein_coding processed_transcript MGP_LPJ_T0051346.1 MGP_LPJ_G0024952.1 mouse_genomes_project 19 28094684 28121070 - Ermp1 protein_coding retained_intron MGP_LPJ_T0051347.1 MGP_LPJ_G0024952.1 mouse_genomes_project 19 28117389 28121058 - Ermp1 protein_coding retained_intron MGP_LPJ_T0050984.1 MGP_LPJ_G0024789.1 mouse_genomes_project 19 8331118 8356489 - MGP_LPJ_P0050984 Ms4a18 protein_coding protein_coding MGP_LPJ_T0051078.1 MGP_LPJ_G0024835.1 mouse_genomes_project 19 10118984 10141319 + MGP_LPJ_P0051078 Fam111a protein_coding protein_coding MGP_LPJ_T0051079.1 MGP_LPJ_G0024835.1 mouse_genomes_project 19 10118984 10141327 + MGP_LPJ_P0051079 Fam111a protein_coding protein_coding MGP_LPJ_T0051080.1 MGP_LPJ_G0024835.1 mouse_genomes_project 19 10125159 10141321 + MGP_LPJ_P0051080 Fam111a protein_coding protein_coding MGP_LPJ_T0100538.1 MGP_LPJ_G0038801.1 mouse_genomes_project 19 8997155 8997205 - Gm24599 snoRNA snoRNA MGP_LPJ_T0017627.1 MGP_LPJ_G0015296.1 mouse_genomes_project 19 5883076 5886603 + Snhg1 processed_transcript lincRNA MGP_LPJ_T0017628.1 MGP_LPJ_G0015296.1 mouse_genomes_project 19 5883088 5886601 + Snhg1 processed_transcript retained_intron MGP_LPJ_T0017629.1 MGP_LPJ_G0015296.1 mouse_genomes_project 19 5883088 5886602 + Snhg1 processed_transcript retained_intron MGP_LPJ_T0017630.1 MGP_LPJ_G0015296.1 mouse_genomes_project 19 5884164 5886603 + Snhg1 processed_transcript lincRNA MGP_LPJ_T0017631.1 MGP_LPJ_G0015296.1 mouse_genomes_project 19 5884290 5886052 + Snhg1 processed_transcript retained_intron MGP_LPJ_T0017632.1 MGP_LPJ_G0015296.1 mouse_genomes_project 19 5884299 5885012 + Snhg1 processed_transcript retained_intron MGP_LPJ_T0017633.1 MGP_LPJ_G0015296.1 mouse_genomes_project 19 5884306 5886505 + Snhg1 processed_transcript lincRNA MGP_LPJ_T0017634.1 MGP_LPJ_G0015296.1 mouse_genomes_project 19 5884317 5886603 + Snhg1 processed_transcript retained_intron MGP_LPJ_T0017635.1 MGP_LPJ_G0015296.1 mouse_genomes_project 19 5884321 5885501 + Snhg1 processed_transcript retained_intron MGP_LPJ_T0017636.1 MGP_LPJ_G0015296.1 mouse_genomes_project 19 5884515 5885463 + Snhg1 processed_transcript retained_intron MGP_LPJ_T0017637.1 MGP_LPJ_G0015296.1 mouse_genomes_project 19 5884552 5885995 + Snhg1 processed_transcript retained_intron MGP_LPJ_T0017638.1 MGP_LPJ_G0015296.1 mouse_genomes_project 19 5884562 5885682 + Snhg1 processed_transcript retained_intron MGP_LPJ_T0017639.1 MGP_LPJ_G0015296.1 mouse_genomes_project 19 5884822 5886603 + Snhg1 processed_transcript retained_intron MGP_LPJ_T0017640.1 MGP_LPJ_G0015296.1 mouse_genomes_project 19 5885056 5886603 + Snhg1 processed_transcript retained_intron MGP_LPJ_T0017641.1 MGP_LPJ_G0015296.1 mouse_genomes_project 19 5885181 5886162 + Snhg1 processed_transcript retained_intron MGP_LPJ_T0017642.1 MGP_LPJ_G0015296.1 mouse_genomes_project 19 5885263 5886603 + Snhg1 processed_transcript retained_intron MGP_LPJ_T0017643.1 MGP_LPJ_G0015296.1 mouse_genomes_project 19 5885634 5886603 + Snhg1 processed_transcript retained_intron MGP_LPJ_T0017644.1 MGP_LPJ_G0015296.1 mouse_genomes_project 19 5885659 5886603 + Snhg1 processed_transcript lincRNA MGP_LPJ_T0050115.1 MGP_LPJ_G0024541.1 mouse_genomes_project 19 36106 46044 + MGP_LPJ_P0050115 Mrpl21 protein_coding protein_coding MGP_LPJ_T0050116.1 MGP_LPJ_G0024541.1 mouse_genomes_project 19 36260 42386 + Mrpl21 protein_coding retained_intron MGP_LPJ_T0050117.1 MGP_LPJ_G0024541.1 mouse_genomes_project 19 36265 38532 + Mrpl21 protein_coding retained_intron MGP_LPJ_T0050118.1 MGP_LPJ_G0024541.1 mouse_genomes_project 19 36265 44408 + MGP_LPJ_P0050118 Mrpl21 protein_coding protein_coding MGP_LPJ_T0050119.1 MGP_LPJ_G0024541.1 mouse_genomes_project 19 36269 40946 + MGP_LPJ_P0050119 Mrpl21 protein_coding nonsense_mediated_decay MGP_LPJ_T0050120.1 MGP_LPJ_G0024541.1 mouse_genomes_project 19 40017 44402 + Mrpl21 protein_coding retained_intron MGP_LPJ_T0017623.1 MGP_LPJ_G0015293.1 mouse_genomes_project 19 3283392 3291203 - Gm14963 processed_transcript processed_transcript MGP_LPJ_T0050703.1 MGP_LPJ_G0024695.1 mouse_genomes_project 19 3933075 3935352 + MGP_LPJ_P0050703 Ppp1r14b protein_coding protein_coding MGP_LPJ_T0013362.1 MGP_LPJ_G0011453.1 mouse_genomes_project 19 46306674 46307681 - processed_pseudogene processed_pseudogene MGP_LPJ_T0101998.1 MGP_LPJ_G0040035.1 mouse_genomes_project 19 6524208 6538268 - unprocessed_pseudogene unprocessed_pseudogene MGP_LPJ_T0100555.1 MGP_LPJ_G0038818.1 mouse_genomes_project 19 56477381 56477509 - Gm22271 snoRNA snoRNA MGP_LPJ_T0051498.1 MGP_LPJ_G0025012.1 mouse_genomes_project 19 36795358 36799080 + MGP_LPJ_P0051498 Cyp26a1 protein_coding protein_coding MGP_LPJ_T0050485.1 MGP_LPJ_G0024652.1 mouse_genomes_project 19 2891379 2898639 - MGP_LPJ_P0050485 Cdc42ep2 protein_coding protein_coding MGP_LPJ_T0051767.1 MGP_LPJ_G0025105.1 mouse_genomes_project 19 44216551 44302510 + MGP_LPJ_P0051767 Pax2 protein_coding protein_coding MGP_LPJ_T0051768.1 MGP_LPJ_G0025105.1 mouse_genomes_project 19 44217899 44302530 + MGP_LPJ_P0051768 Pax2 protein_coding protein_coding MGP_LPJ_T0051769.1 MGP_LPJ_G0025105.1 mouse_genomes_project 19 44220377 44279861 + MGP_LPJ_P0051769 Pax2 protein_coding protein_coding MGP_LPJ_T0050265.1 MGP_LPJ_G0024577.1 mouse_genomes_project 19 1069388 1071205 + MGP_LPJ_P0050265 Pold4 protein_coding protein_coding MGP_LPJ_T0050504.1 MGP_LPJ_G0024661.1 mouse_genomes_project 19 3070257 3075254 - MGP_LPJ_P0050504 Tm7sf2 protein_coding protein_coding MGP_LPJ_T0050505.1 MGP_LPJ_G0024661.1 mouse_genomes_project 19 3070257 3075293 - MGP_LPJ_P0050505 Tm7sf2 protein_coding protein_coding MGP_LPJ_T0050506.1 MGP_LPJ_G0024661.1 mouse_genomes_project 19 3070258 3075293 - MGP_LPJ_P0050506 Tm7sf2 protein_coding protein_coding MGP_LPJ_T0050507.1 MGP_LPJ_G0024661.1 mouse_genomes_project 19 3070337 3075254 - MGP_LPJ_P0050507 Tm7sf2 protein_coding nonsense_mediated_decay MGP_LPJ_T0050508.1 MGP_LPJ_G0024661.1 mouse_genomes_project 19 3070414 3075259 - MGP_LPJ_P0050508 Tm7sf2 protein_coding protein_coding MGP_LPJ_T0050509.1 MGP_LPJ_G0024661.1 mouse_genomes_project 19 3071258 3075236 - MGP_LPJ_P0050509 Tm7sf2 protein_coding protein_coding MGP_LPJ_T0050510.1 MGP_LPJ_G0024661.1 mouse_genomes_project 19 3071529 3075259 - MGP_LPJ_P0050510 Tm7sf2 protein_coding protein_coding MGP_LPJ_T0050511.1 MGP_LPJ_G0024661.1 mouse_genomes_project 19 3072977 3075227 - Tm7sf2 protein_coding retained_intron MGP_LPJ_T0050512.1 MGP_LPJ_G0024661.1 mouse_genomes_project 19 3073579 3075301 - Tm7sf2 protein_coding retained_intron MGP_LPJ_T0050513.1 MGP_LPJ_G0024661.1 mouse_genomes_project 19 3073596 3075318 - Tm7sf2 protein_coding retained_intron MGP_LPJ_T0050514.1 MGP_LPJ_G0024661.1 mouse_genomes_project 19 3073635 3074543 - Tm7sf2 protein_coding retained_intron MGP_LPJ_T0050515.1 MGP_LPJ_G0024661.1 mouse_genomes_project 19 3073637 3075306 - MGP_LPJ_P0050515 Tm7sf2 protein_coding protein_coding MGP_LPJ_T0050516.1 MGP_LPJ_G0024661.1 mouse_genomes_project 19 3074029 3075012 - Tm7sf2 protein_coding retained_intron MGP_LPJ_T0050517.1 MGP_LPJ_G0024661.1 mouse_genomes_project 19 3074613 3075824 - MGP_LPJ_P0050517 Tm7sf2 protein_coding protein_coding MGP_LPJ_T0013367.1 MGP_LPJ_G0011458.1 mouse_genomes_project 19 61255098 61255465 - processed_pseudogene processed_pseudogene MGP_LPJ_T0051897.1 MGP_LPJ_G0025145.1 mouse_genomes_project 19 46344511 46384986 + MGP_LPJ_P0051897 As3mt protein_coding protein_coding MGP_LPJ_T0051112.1 MGP_LPJ_G0024854.1 mouse_genomes_project 19 10678720 10679674 - MGP_LPJ_P0051112 Olfr1457 protein_coding protein_coding MGP_LPJ_T0007108.1 MGP_LPJ_G0005838.1 mouse_genomes_project 19 44140933 44143838 - Gm26644 lincRNA lincRNA MGP_LPJ_T0051439.1 MGP_LPJ_G0024992.1 mouse_genomes_project 19 33524067 33533248 + MGP_LPJ_P0051439 Ifit1 protein_coding protein_coding MGP_LPJ_T0003871.1 MGP_LPJ_G0003469.1 mouse_genomes_project 19 10266875 10282086 - Gm15962 antisense antisense MGP_LPJ_T0003872.1 MGP_LPJ_G0003469.1 mouse_genomes_project 19 10276649 10282130 - Gm15962 antisense antisense MGP_LPJ_T0010318.1 MGP_LPJ_G0008436.1 mouse_genomes_project 19 23143850 23143919 - Mir3084-1 miRNA miRNA MGP_LPJ_T0099291.1 MGP_LPJ_G0037554.1 mouse_genomes_project 19 15683742 15683845 - Gm22880 snRNA snRNA MGP_LPJ_T0051539.1 MGP_LPJ_G0025026.1 mouse_genomes_project 19 38258241 38305317 + MGP_LPJ_P0051539 Cyp2c65 protein_coding protein_coding MGP_LPJ_T0050365.1 MGP_LPJ_G0024610.1 mouse_genomes_project 19 2011796 2016105 + MGP_LPJ_P0050365 Yif1a protein_coding protein_coding MGP_LPJ_T0013349.1 MGP_LPJ_G0011440.1 mouse_genomes_project 19 14144000 14144787 + processed_pseudogene processed_pseudogene MGP_LPJ_T0051734.1 MGP_LPJ_G0025092.1 mouse_genomes_project 19 43484498 43518454 - MGP_LPJ_P0051734 Chuk protein_coding protein_coding MGP_LPJ_T0051735.1 MGP_LPJ_G0025092.1 mouse_genomes_project 19 43484499 43518451 - MGP_LPJ_P0051735 Chuk protein_coding protein_coding MGP_LPJ_T0051736.1 MGP_LPJ_G0025092.1 mouse_genomes_project 19 43485536 43487068 - Chuk protein_coding retained_intron MGP_LPJ_T0051737.1 MGP_LPJ_G0025092.1 mouse_genomes_project 19 43488101 43490172 - Chuk protein_coding retained_intron MGP_LPJ_T0051738.1 MGP_LPJ_G0025092.1 mouse_genomes_project 19 43488390 43495271 - Chuk protein_coding retained_intron MGP_LPJ_T0051739.1 MGP_LPJ_G0025092.1 mouse_genomes_project 19 43489422 43490419 - Chuk protein_coding retained_intron MGP_LPJ_T0051740.1 MGP_LPJ_G0025092.1 mouse_genomes_project 19 43492561 43518443 - Chuk protein_coding retained_intron MGP_LPJ_T0051741.1 MGP_LPJ_G0025092.1 mouse_genomes_project 19 43508347 43518256 - Chuk protein_coding retained_intron MGP_LPJ_T0051474.1 MGP_LPJ_G0025005.1 mouse_genomes_project 19 36054622 36249394 - MGP_LPJ_P0051474 Cpeb3 protein_coding protein_coding MGP_LPJ_T0051475.1 MGP_LPJ_G0025005.1 mouse_genomes_project 19 36054628 36215142 - MGP_LPJ_P0051475 Cpeb3 protein_coding protein_coding MGP_LPJ_T0051476.1 MGP_LPJ_G0025005.1 mouse_genomes_project 19 36055210 36249394 - MGP_LPJ_P0051476 Cpeb3 protein_coding protein_coding MGP_LPJ_T0051477.1 MGP_LPJ_G0025005.1 mouse_genomes_project 19 36055210 36217110 - MGP_LPJ_P0051477 Cpeb3 protein_coding protein_coding MGP_LPJ_T0051478.1 MGP_LPJ_G0025005.1 mouse_genomes_project 19 36056301 36249405 - MGP_LPJ_P0051478 Cpeb3 protein_coding protein_coding MGP_LPJ_T0051479.1 MGP_LPJ_G0025005.1 mouse_genomes_project 19 36057261 36249225 - MGP_LPJ_P0051479 Cpeb3 protein_coding protein_coding MGP_LPJ_T0051480.1 MGP_LPJ_G0025005.1 mouse_genomes_project 19 36057965 36239817 - MGP_LPJ_P0051480 Cpeb3 protein_coding protein_coding MGP_LPJ_T0051481.1 MGP_LPJ_G0025005.1 mouse_genomes_project 19 36088351 36249440 - MGP_LPJ_P0051481 Cpeb3 protein_coding protein_coding MGP_LPJ_T0051482.1 MGP_LPJ_G0025005.1 mouse_genomes_project 19 36215483 36219054 - MGP_LPJ_P0051482 Cpeb3 protein_coding protein_coding MGP_LPJ_T0051483.1 MGP_LPJ_G0025005.1 mouse_genomes_project 19 36215639 36217103 - MGP_LPJ_P0051483 Cpeb3 protein_coding protein_coding MGP_LPJ_T0051484.1 MGP_LPJ_G0025005.1 mouse_genomes_project 19 36215669 36250533 - MGP_LPJ_P0051484 Cpeb3 protein_coding protein_coding MGP_LPJ_T0051485.1 MGP_LPJ_G0025005.1 mouse_genomes_project 19 36215734 36216263 - MGP_LPJ_P0051485 Cpeb3 protein_coding protein_coding MGP_LPJ_T0099296.1 MGP_LPJ_G0037559.1 mouse_genomes_project 19 28471570 28471736 + Gm26046 snRNA snRNA MGP_LPJ_T0017657.1 MGP_LPJ_G0015301.1 mouse_genomes_project 19 24925779 24928377 - Gm20616 processed_transcript processed_transcript MGP_LPJ_T0017658.1 MGP_LPJ_G0015301.1 mouse_genomes_project 19 24925990 24928368 - Gm20616 processed_transcript processed_transcript MGP_LPJ_T0051142.1 MGP_LPJ_G0024883.1 mouse_genomes_project 19 12873313 12874391 - MGP_LPJ_P0051142 protein_coding protein_coding MGP_LPJ_T0051607.1 MGP_LPJ_G0025049.1 mouse_genomes_project 19 40360282 40479349 - MGP_LPJ_P0051607 Tll2 protein_coding protein_coding MGP_LPJ_T0051608.1 MGP_LPJ_G0025049.1 mouse_genomes_project 19 40360282 40479349 - MGP_LPJ_P0051608 Tll2 protein_coding protein_coding MGP_LPJ_T0050246.1 MGP_LPJ_G0024570.1 mouse_genomes_project 19 986519 988665 + MGP_LPJ_P0050246 Ptprcap protein_coding protein_coding MGP_LPJ_T0013364.1 MGP_LPJ_G0011455.1 mouse_genomes_project 19 53830381 53830801 - processed_pseudogene processed_pseudogene MGP_LPJ_T0051274.1 MGP_LPJ_G0024934.1 mouse_genomes_project 19 25558062 25592806 + Vldlr protein_coding retained_intron MGP_LPJ_T0051275.1 MGP_LPJ_G0024934.1 mouse_genomes_project 19 25558598 25592913 + MGP_LPJ_P0051275 Vldlr protein_coding protein_coding MGP_LPJ_T0051276.1 MGP_LPJ_G0024934.1 mouse_genomes_project 19 25558598 25576435 + MGP_LPJ_P0051276 Vldlr protein_coding protein_coding MGP_LPJ_T0051277.1 MGP_LPJ_G0024934.1 mouse_genomes_project 19 25558935 25573350 + Vldlr protein_coding processed_transcript MGP_LPJ_T0051278.1 MGP_LPJ_G0024934.1 mouse_genomes_project 19 25558935 25592778 + MGP_LPJ_P0051278 Vldlr protein_coding protein_coding MGP_LPJ_T0051279.1 MGP_LPJ_G0024934.1 mouse_genomes_project 19 25558935 25597282 + MGP_LPJ_P0051279 Vldlr protein_coding protein_coding MGP_LPJ_T0051280.1 MGP_LPJ_G0024934.1 mouse_genomes_project 19 25559036 25592814 + MGP_LPJ_P0051280 Vldlr protein_coding nonsense_mediated_decay MGP_LPJ_T0051281.1 MGP_LPJ_G0024934.1 mouse_genomes_project 19 25580352 25586880 + MGP_LPJ_P0051281 Vldlr protein_coding protein_coding MGP_LPJ_T0051136.1 MGP_LPJ_G0024878.1 mouse_genomes_project 19 11447080 11448028 - MGP_LPJ_P0051136 Olfr1501 protein_coding protein_coding MGP_LPJ_T0010329.1 MGP_LPJ_G0008447.1 mouse_genomes_project 19 40863972 40864111 + Mir8091 miRNA miRNA MGP_LPJ_T0051952.1 MGP_LPJ_G0025166.1 mouse_genomes_project 19 47685920 47796530 + MGP_LPJ_P0051952 Cfap58 protein_coding protein_coding MGP_LPJ_T0051893.1 MGP_LPJ_G0025143.1 mouse_genomes_project 19 46298423 46304233 - MGP_LPJ_P0051893 Cyp17a1 protein_coding protein_coding MGP_LPJ_T0051894.1 MGP_LPJ_G0025143.1 mouse_genomes_project 19 46299345 46300772 - Cyp17a1 protein_coding retained_intron MGP_LPJ_T0051895.1 MGP_LPJ_G0025143.1 mouse_genomes_project 19 46301984 46302550 - Cyp17a1 protein_coding retained_intron MGP_LPJ_T0051004.1 MGP_LPJ_G0024797.1 mouse_genomes_project 19 8640930 8658694 - MGP_LPJ_P0051004 Ms4a14 protein_coding protein_coding MGP_LPJ_T0051089.1 MGP_LPJ_G0024839.1 mouse_genomes_project 19 10237040 10242718 + MGP_LPJ_P0051089 Olfr1443 protein_coding protein_coding MGP_LPJ_T0010336.1 MGP_LPJ_G0008454.1 mouse_genomes_project 19 46960355 46960426 - Mir6995 miRNA miRNA MGP_LPJ_T0050922.1 MGP_LPJ_G0024765.1 mouse_genomes_project 19 7694862 7759593 + MGP_LPJ_P0050922 Syt7 protein_coding protein_coding MGP_LPJ_T0050923.1 MGP_LPJ_G0024765.1 mouse_genomes_project 19 7694862 7759593 + MGP_LPJ_P0050923 Syt7 protein_coding protein_coding MGP_LPJ_T0050924.1 MGP_LPJ_G0024765.1 mouse_genomes_project 19 7694862 7759593 + MGP_LPJ_P0050924 Syt7 protein_coding protein_coding MGP_LPJ_T0050925.1 MGP_LPJ_G0024765.1 mouse_genomes_project 19 7695255 7759596 + MGP_LPJ_P0050925 Syt7 protein_coding unknown_likely_coding MGP_LPJ_T0051230.1 MGP_LPJ_G0024920.1 mouse_genomes_project 19 22424660 22450021 - Fxn protein_coding retained_intron MGP_LPJ_T0051231.1 MGP_LPJ_G0024920.1 mouse_genomes_project 19 22426462 22452428 - MGP_LPJ_P0051231 Fxn protein_coding protein_coding MGP_LPJ_T0050122.1 MGP_LPJ_G0024543.1 mouse_genomes_project 19 145994 155273 + MGP_LPJ_P0050122 Mtl5 protein_coding protein_coding MGP_LPJ_T0050123.1 MGP_LPJ_G0024543.1 mouse_genomes_project 19 146059 164207 + MGP_LPJ_P0050123 Mtl5 protein_coding protein_coding MGP_LPJ_T0011496.1 MGP_LPJ_G0009614.1 mouse_genomes_project 19 33117487 33117646 + Gm27818 misc_RNA misc_RNA MGP_LPJ_T0010328.1 MGP_LPJ_G0008446.1 mouse_genomes_project 19 40162979 40163066 + Mir8092 miRNA miRNA MGP_LPJ_T0051131.1 MGP_LPJ_G0024873.1 mouse_genomes_project 19 11375599 11376688 + MGP_LPJ_P0051131 Olfr1495 protein_coding protein_coding MGP_LPJ_T0051787.1 MGP_LPJ_G0025115.1 mouse_genomes_project 19 44727647 44730815 - MGP_LPJ_P0051787 Lbx1 protein_coding protein_coding MGP_LPJ_T0051122.1 MGP_LPJ_G0024864.1 mouse_genomes_project 19 11026575 11027520 - MGP_LPJ_P0051122 Olfr1472 protein_coding protein_coding MGP_LPJ_T0050989.1 MGP_LPJ_G0024792.1 mouse_genomes_project 19 8480219 8514053 - MGP_LPJ_P0050989 1700025F22Rik protein_coding protein_coding MGP_LPJ_T0050990.1 MGP_LPJ_G0024792.1 mouse_genomes_project 19 8480219 8501103 - MGP_LPJ_P0050990 1700025F22Rik protein_coding protein_coding MGP_LPJ_T0050991.1 MGP_LPJ_G0024792.1 mouse_genomes_project 19 8480219 8514039 - MGP_LPJ_P0050991 1700025F22Rik protein_coding protein_coding MGP_LPJ_T0050992.1 MGP_LPJ_G0024792.1 mouse_genomes_project 19 8480219 8514039 - MGP_LPJ_P0050992 1700025F22Rik protein_coding protein_coding